TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.396454 %AT, 2228598 nt, 19835 terms. Intergenic: 0.423024 %AT, H2T: 304687 nt, 1814 terms; T2T: 87218 nt, 1326 terms; H2H: 113731 nt, 1123 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|50841496|ref|NC_006085.1| Propionibacterium acnes KPA171202, complete genome (length 2560265) PPA0001 245 - 1747 + | chromosomal replication initiator protein DnaA PPA0002 2219 - 3379 + | DNA polymerase III subunit beta PPA0003 3666 - 4169 + | hypothetical protein recF 4227 - 5411 + | recombination protein F PPA0005 5389 - 5997 + | hypothetical protein TERM 1 6005 - 6048 + F 100 -23.4 -3.1994 | opp_overlap 6043 ACGGATGAGGTGGAA GTCCAGTCATGTTGACTGAG TAGT CACGGTCAACATGACTGGAC TTCGTCCATGGTCTA TERM 2 6275 - 6237 - f 70 -12.4 -2.71681 | CAACCTGTTGAATCA CCGCCATGGACCGCTCCT CAG AAATGCTATCCATGGCGG ACGTAGCCTCGTCTA TERM 3 6420 - 6453 + F 71 -8.1 -3.99592 | gap 1, opp_overlap 6419 GTTCTAAAAATTCAC CGAGCCCAAG-GGTGT TCA ATACCTCTAGGGCACG TTTGTCGTCCTGGGT TERM 4 8513 - 8533 + G 78 -2.3 -5.14965 | AGCTGGGAGCCGCGA GGCCTTCGG TGA CCGTCTGCC TTTTTTGCTGAAAAT PPA0008 8304 - 9491 + | mannose-6-phosphate isomerase TERM 5 10911 - 10897 - g 84 -11.4 -4.06185 | CAGACAAAGACCAAA CTCGGC AAC GCCGAG GCCAAATCTTTCGTC gyrB 9733 - 11805 + | DNA gyrase subunit B TERM 6 13059 - 13038 - g 73 -4.4 -4.59773 | gap 1, opp_overlap 13041, overlap 13041 GCTCAGGCCGAAAAA GACGCCCAC ATCCA GCGGGC-TC TCGTCAAGGCCCTCG PPA0010 11847 - 14522 + | DNA gyrase subunit A PPA0011 14515 - 15147 + | hypothetical protein PPA0012 16214 - 15246 - | L-lactate dehydrogenase TERM 7 16082 - 16095 + g 78 -4.5 -4.84359 | gap 1, overlap 16082 GGTTGTCGAGAGCTT GG-CCG TCA CGGACC TTTTTGTCGACATCA PPA0013 16412 - 16606 + | hypothetical protein PPA0014 16732 - 17739 + | putative transcriptional regulator PPA0015 17736 - 19241 + | ABC transporter protein TERM 8 19247 - 19234 - f 83 -4.5 -5.14563 | opp_overlap 19234 19236 19239, overlap 19236 19239 CTGTTGATGAAAAAA CAGGA TGAA TCCCG TATTCATTCTTAATG PPA0016 19324 - 20301 + | ribose ABC transporter PPA0017 20350 - 21291 + | periplasmic sugar-binding protein PPA0018 21288 - 22217 + | sugar kinase PPA0019 22214 - 22597 + | D-ribose pyranase PPA0020 22780 - 23049 + | hypothetical protein TERM 9 23165 - 23112 - T 84 -14.9 -2.91383 | opp_overlap 23127 AGTGTTATTTATACA GCGCGACATCATAAC-CGGCACAAG CGCATT CTT-TGCCGTAGTATGATGTCGCGC TGAGCAATCTTGAAT PPA0021 23677 - 23201 - | PTS system, galactitol-specific IIA component PPA0022 24990 - 23734 - | PTS system, galactitol-specific IIC component PPA0023 25313 - 25011 - | PTS system, galactitol-specific IIB component PPA0025 25686 - 25303 - | alcohol dehydrogenase TERM 10 28085 - 28105 + r 76 -3.3 -4.93365 | gap 1, opp_overlap 28085, overlap 28085 GTGCGATTCACGTAA GG-CACCA TTGTTT TGGTGGCC TTTTTAGTTATGGGG PPA2391 28711 - 28427 - | hypothetical protein PPA2390 29083 - 28718 - | hypothetical protein PPA0029 29984 - 29313 - | hypothetical protein PPA0030 30586 - 30008 - | putative phosphatase PPA0031 30784 - 31542 + | transcriptional regulator PPA2392 31730 - 32152 + | hypothetical protein PPA0032 32895 - 32158 - | hypothetical protein PPA0033 33428 - 32889 - | hypothetical protein PPA0034 33561 - 34619 + | putative aminotransferase TERM 11 34876 - 34893 + F 75 -5.5 -4.62069 | overlap 34872 34865 AACTGTCGAAGCGCC TGAGGGC GTTT GACCTCA TTTTTGACGTAGCCG PPA0037 35552 - 36118 + | acetyltransferase PPA0038 36132 - 36791 + | hypothetical protein TERM 12 37146 - 37200 + G 76 -9.9 -3.84406 | GTGCTATGTGCATGC CTAGG-CGGCCTGGGGGGAGCTGTTGC CTG GCACC-GCGCCTCTCATGCCGACCAAG TTCTTGTCATGACGC PPA0039 37044 - 37682 + | hypothetical protein PPA0040 37682 - 38500 + | hypothetical protein PPA0041 38497 - 39975 + | secretion system protein PPA0042 39966 - 40847 + | membrane spanning protein PPA0043 40840 - 41742 + | membrane associated protein PPA0044 41739 - 42401 + | hypothetical protein PPA0046 42398 - 42907 + | hypothetical protein TERM 13 43850 - 43837 - g 73 -4.5 -4.62471 | GGCAAGTGGGAAAAA TCGAC CCCT GCCGA GACTCCGACCACCGA PPA0047 42904 - 45666 + | hypothetical protein PPA0048 47125 - 45713 - | hypothetical protein TERM 14 46047 - 46031 - G 72 -2.1 -4.72986 | TAGCCCGACGAAAAA GCCAGCC ACG AGCAGAC CCCAACGGTTCGGGG PPA0049 47426 - 49135 + | formate--tetrahydrofolate ligase PPA0050 49241 - 49654 + | hypothetical protein PPA0051 50181 - 49651 - | hypothetical protein PPA0052 50871 - 50197 - | hypothetical protein TERM 15 51044 - 51017 - R 100 -20.6 -4.08692 | GAATCGCTGCGAAAA CCGGCCGTGCCC CGAA GGACACGGCCGG TTCACGGCTTCCCGC PPA0053 53539 - 51068 - | ABC transporter associated permease TERM 16 53559 - 53594 + r 83 -15.5 -2.78816 | CCTCCAATCCGGCCA TTGCCTCGCTCACCG ATTCGG CGGTGGGGGAGGCAA TGTCGTCGACGATGC PPA0054 54573 - 53539 - | ABC transporter ATP-binding protein TERM 17 54610 - 54586 - R 76 -12.9 -3.01924 | CATGGTTCCCGAAGA GGGTATCGACT AGT AGCCGACACCC CCTCACGCCTTAGGT PPA0055 55337 - 54681 - | two-component response regulator PPA0056 55967 - 55356 - | hypothetical protein PPA0057 56870 - 56040 - | sugar transport permease BglB PPA0058 57763 - 56867 - | transport permease PPA0059 59152 - 57848 - | sugar-binding protein PPA2395 59132 - 59323 + | hypothetical protein PPA0060 59565 - 60251 + | DeoR family transcriptional regulator PPA0061 60248 - 61636 + | putative glucosidase TERM 18 63297 - 63260 - g 88 -14.1 -3.62046 | gap 1, opp_overlap 63289 63294 CCACCCCCTCAAGAA CGGCAACCGACGCGCCGA GGT TGGGCTCG-CGGCTGCCG AGTGGCTCGCCGTTA PPA0062 61629 - 64757 + | glycosyl hydrolase PPA0063 64754 - 65809 + | hypothetical protein PPA0064 65803 - 66447 + | putative hydrolase PPA0065 66444 - 67739 + | hypothetical protein PPA0066 69261 - 67723 - | glycosyl hydrolase TERM 19 68797 - 68785 - G 76 -6.3 -4.60487 | CAGCACGTCCAAAAA GTTCA TGA TGAAC GAGGTGGGCATGAAA PPA0067 69367 - 70302 + | putative carbohydrate kinase PPA0068 71691 - 70321 - | putative two component sensor kinase PPA0069 71871 - 72860 + | UDP-glucose 4-epimerase TERM 20 72879 - 72910 + TF 90 -18 -2.87683 | opp_overlap 72882, overlap 72882 TTCCCTGTTGCCACA CCACCGGCCCTGCA CTTG TGCGGGGCCGGTGC TATGTCGGGGCCTGT TERM 21 72907 - 72882 - Tf 84 -16.1 -2.62184 | opp_overlap 72879 72882 CCTGTTGCCACACCA CCGGCCCTGCA CTTG TGCGGGGCCGG TGCTATGTCGGGGCC TERM 22 72882 - 72907 + TF 95 -18.3 -2.69151 | opp_overlap 72882, overlap 72879 CCTGTTGCCACACCA CCGGCCCTGCA CTTG TGCGGGGCCGG TGCTATGTCGGGGCC PPA0070 73748 - 72933 - | transcriptional regulator PPA0071 73685 - 76414 + | putative membrane transport protein PPA0072 76411 - 78780 + | membrane associated protein PPA0073 80411 - 78966 - | hypothetical protein PPA0074 81175 - 80414 - | ABC transporter, ATP-binding protein PPA0075 81438 - 82250 + | hypothetical protein TERM 23 82626 - 82657 + G 76 -13.8 -3.08438 | GCACACTTCGTATCC TCTGACTGTCACCA GTTG TGGTGTCAGTCAGG TATTCGAATCTGCTC PPA0076 82471 - 83481 + | periplasmic binding protein PPA0077 83628 - 84650 + | ABC transporter TERM 24 84704 - 84719 + G 74 -3.2 -4.82901 | TCGATGGACATTGCA TTGTCG ACGG CGTCAA TTTTTGTGCCCGACC PPA0078 84643 - 85410 + | permease PPA0079 85493 - 86950 + | aldehyde dehydrogenase PPA0080 86995 - 88281 + | chloride channel protein TERM 25 89982 - 89992 + G 70 -4.6 -4.49756 | overlap 89979 89984 CCCGAGCCTCAACGT TCCG AAG CGGG TTTTCGTCTTTGGCG PPA0081 88336 - 90702 + | carbohydrate phosphorylase PPA0082 91779 - 91144 - | hypothetical protein PPA0083 94183 - 91967 - | hypothetical protein PPA0084 95524 - 94313 - | ROK family transcriptional regulator PPA0085 95889 - 97232 + | periplasmic protein TERM 26 97313 - 97350 + G 80 -11.1 -3.80858 | TTCCAGCCGGCCGCC GGGCCCGCCGCCGCACG CCTA TGGGTGGTGGTGGCCCC TTTGCTGCATTGTGC PPA0086 97276 - 98211 + | putative permease protein PPA0087 98211 - 99092 + | permease protein PPA0088 99230 - 100351 + | putative transcriptional regulator PPA0089 100341 - 102530 + | glycosyl hydrolase family protein pfkA 102809 - 104017 + | 6-phosphofructokinase PPA0091 104636 - 104055 - | putative regulatory protein PPA0092 107374 - 104633 - | hypothetical protein TERM 27 104763 - 104739 - G 77 -7.7 -4.3898 | overlap 104740 ACCATCTCGACAAAA CCGCCCTGGGC GCT GGCCAGGTCGA GGGCTTGGCAGCCGC PPA0093 108500 - 107367 - | hypothetical protein TERM 28 107824 - 107797 - G 78 -13.4 -3.17194 | gap 1 AGGGTGCCAATGTAA GCGGCCTG-GCCG CCG CGTCTCAGGCCGC CACGGGCAACGTCAT TERM 29 107982 - 107950 - G 78 -10.6 -3.92075 | gap 1, overlap 107951 107958 ACCGCCAGGCACAAA GCTGACAA-GGCGCG ATTA CGCGCCATCGTCAGT CGTGACAGCTCCAGC TERM 30 107981 - 107951 - G 75 -14.1 -2.94924 | gap 1, overlap 107950 107958 CCGCCAGGCACAAAG CTGACAA-GGCGCG ATTA CGCGCCATCGTCAG TCGTGACAGCTCCAG TERM 31 107973 - 107958 - G 72 -11.8 -3.41126 | overlap 107951 107950 GCACAAAGCTGACAA GGCGCG ATTA CGCGCC ATCGTCAGTCGTGAC aspA 108930 - 110402 + | aspartate ammonia-lyase PPA0095 110409 - 111707 + | anaerobic C4-dicarboxylate transporter TERM 32 111799 - 111750 - T 100 -27.3 -3.57792 | opp_overlap 111751 111752, overlap 111751 GTACCCAGTGTGAAA GCGCGTGGGTGGGGCTCAGCCTT GGAA AAGGCTCAGCCCCACCCACGCAT TTGGGGGCTCAGATA TERM 33 111751 - 111798 + T 100 -28.6 -3.55563 | opp_overlap 111750 111751, overlap 111752 TACCCAGTGTGAAAG CGCGTGGGTGGGGCTCAGCCTT GGAA AAGGCTCAGCCCCACCCACGCA TTTGGGGGCTCAGAT TERM 34 111798 - 111751 - T 100 -30.8 -2.74461 | opp_overlap 111751 111752, overlap 111750 TACCCAGTGTGAAAG CGCGTGGGTGGGGCTCAGCCTT GGAA AAGGCTCAGCCCCACCCACGCA TTTGGGGGCTCAGAT TERM 35 111752 - 111797 + T 100 -32.1 -2.73124 | opp_overlap 111751 111750, overlap 111751 ACCCAGTGTGAAAGC GCGTGGGTGGGGCTCAGCCTT GGAA AAGGCTCAGCCCCACCCACGC ATTTGGGGGCTCAGA PPA0096 112098 - 111808 - | hypothetical protein PPA0097 112227 - 113678 + | catalase TERM 36 113693 - 113725 + T 100 -18.5 -3.53012 | overlap 113691 ACGTGTTGATCGTTC CCAGCGCTGGGCTGT ACT GCAGCTCAGTGCTGG TTTGACCACACCCGC PPA0098 115461 - 113716 - | ABC transporter PPA0099 117224 - 115458 - | ABC transporter PPA0100 118207 - 117221 - | magnesium-chelatase subunit ChlI PPA0101 120173 - 118209 - | magnesium-chelatase 67 kDa subunit TERM 37 118361 - 118407 + g 72 -10.9 -3.33696 | gap 1, overlap 118362 GGATACCTCGTGGGT CCTCGGTGTCGATG-ACGACCC AGCT GAGTCGTGTGTCGACGCCGAGC TTGGTTGCCACCCGA TERM 38 118362 - 118406 + g 76 -14.4 -2.60075 | gap 1, overlap 118361 GATACCTCGTGGGTC CTCGGTGTCGATG-ACGACCC AGCT GAGTCGTGTGTCGACGCCGAG CTTGGTTGCCACCCG TERM 39 119195 - 119228 + g 78 -7.3 -4.59773 | gap 1, overlap 119197 GTTCGCCTGAACTGC TGGGCGGCGTGGCAAG ATT CTCGCC-CGCCTGCCA TTTTTCCACGTCGGG PPA0102 124195 - 120173 - | cobalamin biosynthesis protein CobN TERM 40 122626 - 122609 - GR 71 -5.6 -4.4078 | CCCGGCGAAGGAAAA TTCGTC GTGGTG GACGAA GAGGGATCCCGGGTG PPA0103 125169 - 124075 - | radical SAM superfamily protein PPA0104 126167 - 125166 - | ABC transporter PPA0105 127303 - 126164 - | transporter (putative iron (III) permease) PPA0106 128630 - 127386 - | periplasmic-binding protein of ABC transporter PPA0107 129955 - 128687 - | periplasmic-binding protein TERM 41 129965 - 129983 + r 81 -12.4 -3.64703 | ACTCACGCGGTTCTC CCTGCGGT CAT GCCGCAGG TTTCGCTGAGGCGCA PPA0108 131012 - 130239 - | hypothetical protein TERM 42 131040 - 130994 - G 72 -12.4 -3.06302 | gap 1, overlap 131036 AGCACCGGGAGGGAA CGCGGTT-CGGGGCGGTCA TGGTGTTATT CAACCGCCCCGAAACCGCA TCGTCAGGACGTCAC PPA0109 132836 - 131052 - | myosin-crossreactive antigen PPA0110 132955 - 134664 + | thiamine-phosphate pyrophosphorylase PPA0111 134788 - 135018 + | hypothetical protein TERM 43 135624 - 135645 + G 76 -12.3 -3.38218 | ATGGCCTCCGATGAC CCTGCTGCA GTGG TGCGGCAGG TTGTGCAGTCTTTCG thiE 135027 - 135680 + | thiamine-phosphate pyrophosphorylase PPA0113 136897 - 135938 - | hypothetical protein TERM 44 136921 - 136935 + H 77 -2.7 -5.04385 | TTATCGACACAGGCC CGCGG ATGCA CCACG TTTTTTGAACCTGTG PPA0114 137230 - 137457 + | hypothetical protein TERM 45 138080 - 138093 + G 71 -9.5 -3.80573 | ATCCTCATGCCGATT GCCGC CGTA GCGGC TTTCCTGCTCATCGC PPA0115 137543 - 139213 + | potassium-transporting ATPase subunit A TERM 46 139403 - 139424 + G 85 -8.7 -4.66163 | overlap 139394 139401 TGCTCACTGGTGTCA CCGACGG CGGTGTTT CCGTCGG TTTTTCCATGGCCAT PPA0116 139216 - 141330 + | potassium-transporting ATPase B chain PPA0117 141343 - 141948 + | potassium-transporting ATPase C chain PPA0118 141989 - 144481 + | two-component sensor, KdpD PPA0119 144478 - 145161 + | two-component response regulator, KdpE PPA0120 145165 - 145689 + | hypothetical protein PPA0121 145752 - 145958 + | hypothetical protein PPA0122 147767 - 146394 - | M16 family peptidase TERM 47 147116 - 147102 - G 70 -10 -3.42503 | CTTGAATATTGACAA GTCGAG GTC CTCGAC TCCCTCTCCGGCAAC TERM 48 148349 - 148394 + H 100 -14.7 -3.85817 | gap 1, overlap 148352 148353 GAACTCGTCCCTGAA TGCGCTCGGGGAGGTCCCCGGT GGC AGCGGGAACCGCCCCGAG-GTA TTTATCGGCCAAGGT TERM 49 148352 - 148392 + H 88 -15.3 -3.51934 | overlap 148349 148353 CTCGTCCCTGAATGC GCTCGGGGAGGTCCCCGGT GGC AGCGGGAACCGCCCCGAGG TATTTATCGGCCAAG TERM 50 148353 - 148391 + H 100 -18.8 -2.70946 | overlap 148352 148349 TCGTCCCTGAATGCG CTCGGGGAGGTCCCCGGT GGC AGCGGGAACCGCCCCGAG GTATTTATCGGCCAA PPA0125 149143 - 149664 + | hypothetical protein TERM 51 150641 - 150613 - g 71 -8.7 -3.70925 | overlap 150609 CGATCAACAAATTAA GGGCGGTGGCCTC AAG GTGACGACCACCC TGGATCGTAAGGACC TERM 52 150709 - 150695 - g 74 -5.7 -4.54553 | CAGAAATATAAGAAA GTTGC TGGCC GCAAC GCTGGTCCTGAGGGA PPA0126 149657 - 152002 + | putative penicillin-binding protein TERM 53 152820 - 152841 + G 71 -6.5 -4.20042 | gap 1, overlap 152836 TGGCCTGCGCGGGGA GCCTCCA-GG CGG CCGTGGTGGC TTTTGCCGTCTTGGT PPA0127 152012 - 153559 + | membrane spanning protein PPA0128 153556 - 154731 + | membrane spanning protein PPA0129 154728 - 156065 + | hypothetical protein PPA0130 157288 - 156026 - | putative glycosyl transferase PPA0131 157556 - 158683 + | putative glycosyl transferase PPA0132 158680 - 160002 + | hypothetical protein PPA0133 160752 - 159976 - | hypothetical protein PPA0134 160926 - 161543 + | putative acetyltransferase PPA0135 161627 - 162739 + | aspartate aminotransferase PPA0136 162739 - 163731 + | NAD-dependent dehydrogenase TERM 54 163772 - 163742 - f 76 -13.9 -2.75992 | opp_overlap 163743, overlap 163739 CCTGACGTAACAGTA GTCGGGCCGGGCC GCTAA GGTCCGGCCCGAT TCTCACATCTCTGCT TERM 55 163743 - 163771 + F 100 -19.6 -3.35934 | opp_overlap 163742 163739 CTGACGTAACAGTAG TCGGGCCGGGCC GCTAA GGTCCGGCCCGA TTCTCACATCTCTGC TERM 56 164534 - 164548 + G 70 -10 -3.54424 | overlap 164524 164523 CAGCGTGGCTGCTGT CAGCCA TCT TGGCTG TTTGGCAGCATCCGG TERM 57 165022 - 165036 + G 76 -7.1 -4.5442 | GTGTCAAGGGAATTC GCGGA GGCTA TCCGC TTTTATCCTTGGGCG PPA0137 163833 - 165215 + | hypothetical protein PPA0138 165419 - 166996 + | dipeptide/tripeptide permease TERM 58 167016 - 167045 + F 84 -15.7 -2.59431 | overlap 167012 ACTCCCAACCCATTG CGAGGTCCGTCCC GTTT GGGGTGGGCCTCG TGCCTTGTCAGGGGG PPA0139 167045 - 168424 + | reductase, ferredoxin TERM 59 169211 - 169233 + G 70 -3.2 -4.66833 | GGATCGAACTACCGC GTCGACTCCG GAT CGGTGGCCAC TTTTTGAGGTTCGAC PPA0140 168440 - 169240 + | putative ketoacyl reductase PPA0141 169561 - 169304 - | hypothetical protein PPA0142 171609 - 169597 - | phosphotransferase system TERM 60 171528 - 171545 + g 75 -7.7 -4.25104 | CAATGAGTCCGGCGA CTGAGGT GATG ACCTCGG TTTTGGTCGAGCCGA PPA0143 172569 - 171619 - | putative phosphofructokinase PPA0144 173658 - 172897 - | DeoR family transcriptional regulator PPA0145 173823 - 175121 + | putative UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase PPA0146 175105 - 176364 + | hypothetical protein TERM 61 176992 - 176966 - g 70 -10.8 -3.43773 | overlap 176964 176967 GTTGATACGGAAATA CTCACGCCCCCT GAC AGGCGGCGTGAT GCGAACGACGGTGAC TERM 62 176991 - 176967 - g 76 -14.3 -2.65942 | overlap 176966 176964 TTGATACGGAAATAC TCACGCCCCCT GAC AGGCGGCGTGA TGCGAACGACGGTGA PPA0147 176483 - 177598 + | putative glycosyl transferase TERM 63 178698 - 178736 + G 77 -11.6 -3.61398 | overlap 178700 GATCCGGGGTATCCC TACGGTGACGGCAAGGCG GCT CGCAATGTCGCCACCGTG TTGTTGAAAACCGGC TERM 64 178700 - 178734 + G 72 -12 -3.38812 | overlap 178698 TCCGGGGTATCCCTA CGGTGACGGCAAGGCG GCT CGCAATGTCGCCACCG TGTTGTTGAAAACCG PPA0148 177696 - 178769 + | putative UDP-N-acetylglucosamine 2-epimerase PPA0149 178769 - 179890 + | putative glycosyl transferase group 1 PPA0150 180035 - 181060 + | hypothetical protein PPA0151 181702 - 181406 - | hypothetical protein TERM 65 181550 - 181566 + g 71 -5.7 -4.39287 | opp_overlap 181550 ATTCTCGAACAAGGA CGGGTCC TGG GAGCCCG TTTTCCTATCCTTAG PPA0152 183081 - 181699 - | putative NADH dehydrogenase PPA0154 183208 - 183855 + | MutT/Nudix family protein PPA0155 183837 - 186353 + | ATP-dependent helicase PPA0156 186661 - 187290 + | putative ABC-type transporter, permease component TERM 66 188717 - 188730 + G 71 -6.7 -4.18802 | CGTTGCTTTTCTCAT TGCCA TTGC TGGCA TTTTCGGGTCTCTCT TERM 67 188947 - 188958 + G 75 -2.2 -4.91109 | overlap 188933 188942 CGACTCGTCAGGGTC TGAG GATC CTCG TTTTTGTCCTGCCCG PPA0157 187287 - 189386 + | ABC transporter PPA0158 190574 - 189399 - | putative glycosyl transferase PPA0159 191084 - 190665 - | hypothetical protein PPA0160 191062 - 191460 + | hypothetical protein TERM 68 191668 - 191632 - TR 100 -21 -2.89881 | gap 1, opp_overlap 191637, overlap 191637 TAGGTATCGGACATA GC-GAAGGGCCGGTGAC GATC GCCACCGGCCCTTCTGC ACATTCGAGGGTCAG TERM 69 191662 - 191637 - TR 100 -18.3 -3.16177 | opp_overlap 191637, overlap 191632 ATCGGACATAGCGAA GGGCCGGTGAC GATC GCCACCGGCCC TTCTGCACATTCGAG TERM 70 191637 - 191662 + Tr 89 -16.1 -3.33261 | opp_overlap 191637 191632 ATCGGACATAGCGAA GGGCCGGTGAC GATC GCCACCGGCCC TTCTGCACATTCGAG PPA0161 192687 - 191680 - | dihydroorotate dehydrogenase 2 TERM 71 192580 - 192606 + g 78 -10 -3.97947 | AGCTCCGACCCCGGC GTCGGCGAGGGC CCT GACCCCGTCGAC TTTCTGCTGGATGGG PPA0162 196325 - 192711 - | pyruvate-flavodoxin oxidoreductase TERM 72 193185 - 193208 + g 78 -2.4 -5.03314 | gap 1, overlap 193190 GTACACCGACCCGTA GGCGATGGCTT GCA GGGCCAT-GTC TTTTTTGGCGGTGGG TERM 73 193576 - 193621 + g 100 -18.3 -3.60792 | opp_overlap 193569, overlap 193560 193577 TCGACGAACTCCGGG TCGAGTTGGCTGGACACCTCC TGGA GGCGGCGTCTGGCCAACTCGG TTTGGACGTTGGCGG TERM 74 193577 - 193620 + g 88 -19.6 -2.76261 | opp_overlap 193569, overlap 193560 193576 CGACGAACTCCGGGT CGAGTTGGCTGGACACCTCC TGGA GGCGGCGTCTGGCCAACTCG GTTTGGACGTTGGCG PPA0163 198128 - 196341 - | putative glutamate synthase (NADPH) small subunit TERM 75 198697 - 198683 - g 73 -10 -3.5882 | GAGATGACGGCCAAA CTGGAG CGA CTCCAG GGGGAGCTGGATAAG PPA0164 198350 - 198724 + | hypothetical protein PPA0165 199567 - 198746 - | regulator protein TERM 76 199104 - 199120 + g 70 -5.1 -4.57837 | overlap 199100 GCGCGCACCTTTGCC GCTGC AGCACAG GCAGC TTTTTCAAGCGCTAT TERM 77 199447 - 199414 - G 72 -10.9 -3.40403 | overlap 199415 199421 TGTGGCGCATGACAA CCGAGAACCCCCCCG ATTT CGAGGCGGTGCTCGA ATGGGTCACTGATGC TERM 78 199820 - 199810 - H 71 -6.8 -4.18494 | opp_overlap 199810, overlap 199811 GACGTCCATCGAAAA CGGT CCT ACCG TCATATTGGTCGGAC PPA0166 199902 - 201590 + | putative L-lactate permease TERM 79 201676 - 201661 - g 70 -10.4 -3.48684 | opp_overlap 201661 TGACAACCACTACAA GCCCTG GCGC CAGGGC TACCTTGCCCGGCTT PPA0167 201645 - 202439 + | hypothetical protein TERM 80 203375 - 203400 + G 70 -4.6 -4.45544 | TGGTGTGACCGACGG TGACGGGCCG CAGGAA CAGCACGTCA TTTTCCTTGATAACG PPA0168 202443 - 203978 + | putative iron-sulfur protein PPA0169 203975 - 204655 + | hypothetical protein TERM 81 204699 - 204669 - f 83 -13.4 -3.48378 | gap 1, opp_overlap 204672, overlap 204658 204672 GAAACACGACCAGAA CTAGTGCCCCGGT TGAGGG ACCGGGGCACT-G CTGTGCCTGAGGGTG TERM 82 204672 - 204697 + F 85 -16.9 -2.64616 | opp_overlap 204669 204658 204672 ACACGACCAGAACTA GTGCCCCGGTT GAGG GACCGGGGCAC TGCTGTGCCTGAGGG TERM 83 204697 - 204672 - f 87 -16.2 -2.8751 | opp_overlap 204672, overlap 204669 204658 ACACGACCAGAACTA GTGCCCCGGT TGAGGG ACCGGGGCAC TGCTGTGCCTGAGGG PPA0170 204847 - 205509 + | putative ABC transporter PPA0171 205506 - 206735 + | hypothetical protein PPA0172 206732 - 207325 + | hypothetical protein PPA0173 208954 - 207350 - | transport ATP-binding protein, CydCD PPA0174 210591 - 208951 - | transport ATP-binding protein, CydCD TERM 84 209880 - 209894 + g 78 -10 -3.90922 | opp_overlap 209880 209876 209871 AGGACAGGAAACTGA TGCGCA GGG TGCGCA TTGTTTCGGAGCGGT TERM 85 210531 - 210475 - G 86 -14.4 -3.272 | gap 1, overlap 210476 210478 210500 ACCACGGGACAGCAA CCAGGCCTGTGCGAGGATGAGCAAAGC CGTA GCCACGCCCA-CCACGCACAGACCTGC GAGAAAAGGAAGAGT TERM 86 210530 - 210476 - G 85 -17.9 -2.55999 | gap 1, overlap 210475 210478 210500 CCACGGGACAGCAAC CAGGCCTGTGCGAGGATGAGCAAAGC CGTA GCCACGCCCA-CCACGCACAGACCTG CGAGAAAAGGAAGAG TERM 87 210528 - 210478 - G 77 -14.7 -2.81725 | gap 1, overlap 210476 210475 210500 ACGGGACAGCAACCA GGCCTGTGCGAGGATGAGCAAAGC CGTA GCCACGCCCA-CCACGCACAGACC TGCGAGAAAAGGAAG TERM 88 210579 - 210545 - G 79 -12.1 -3.45405 | gap 1, overlap 210543 210546 GCGAGAAAAGGAAGA GTGG-CCCGCGCCCGG CGAA CCAGGCGCGGATCCAG CGGAGCTGCCACGGA TERM 89 210578 - 210546 - G 78 -15.6 -2.6652 | gap 1, overlap 210545 210543 CGAGAAAAGGAAGAG TGG-CCCGCGCCCGG CGAA CCAGGCGCGGATCCA GCGGAGCTGCCACGG PPA0175 211668 - 210595 - | cytochrome d ubiquinol oxidase, subunit II PPA0176 213201 - 211681 - | cytochrome d ubiquinol oxidase subunit I TERM 90 212832 - 212844 + g 73 -9.1 -3.85698 | TGCACGCCAGGTGGA CTCCC TTG GGGAG TTTCTCCCAGCCGAA PPA0177 214889 - 213336 - | putative aminoacid permease TERM 91 213653 - 213630 - G 72 -2.2 -4.78107 | overlap 213634 CATGAGGATGAAAAA CCAGTTCGGG CCGG CCCGGAAGGG CCGTTCGACGTCGGG TERM 92 214144 - 214124 - G 80 -3.9 -5.12617 | overlap 214125 GAAGGAGGTAAAAAA TTCCAGCCA TAG TGGCCGAAC GGAGCACCGAGACCG PPA0178 217000 - 215000 - | putative ABC transporter TERM 93 216132 - 216160 + g 77 -10.9 -3.59262 | overlap 216133 CCGGAGTACGCCTCC TCCACCCGCGAGT TGA GCTCGCCGGTGGC TTTCCACATCTGGGC TERM 94 216133 - 216159 + g 77 -14.4 -2.75343 | overlap 216132 CGGAGTACGCCTCCT CCACCCGCGAGT TGA GCTCGCCGGTGG CTTTCCACATCTGGG PPA0179 218733 - 216997 - | ABC-type transporter TERM 95 218970 - 218984 + H 78 -8.6 -4.14243 | opp_overlap 218970 GTAGCGGGTAAGATA TTGGGA TTT TCCCAA TTTTCGCGTAGGATG TERM 96 219662 - 219644 - g 74 -3.9 -4.72986 | gap 1, opp_overlap 219655, overlap 219647 GAGGCGGACGAAAAA CAAGCGAA CGCT TTCGCT-G CGGAATTGCTGCTGC TERM 97 219660 - 219647 - g 76 -6.7 -4.47707 | opp_overlap 219655, overlap 219644 GCGGACGAAAAACAA GCGAA CGCT TTCGC TGCGGAATTGCTGCT PPA0180 219005 - 220114 + | hypothetical protein PPA2393 220111 - 220665 + | hypothetical protein lysS 220963 - 222495 + | lysyl-tRNA synthetase PPA0182 222815 - 222534 - | putative septation inhibitor protein TERM 98 222756 - 222777 + g 78 -10.1 -3.99494 | gap 1 TCGTTCATCCATTGT GGCCC-GGTC CTT GGCCTGGGCC TTCTTCTTGGCTTGC PPA0183 222937 - 223767 + | membrane spanning protein DUF881 PPA0184 225753 - 223855 - | putative serine/threonine protein kinase TERM 99 225506 - 225484 - G 82 -11.3 -3.99324 | gap 1, opp_overlap 225490 225495 225496 225497 CTCCATGACGATAAA CGGC-ACCGG CAGG CCGGTAGCCG GGTCTTTCGTTTCAC PPA0185 227227 - 225800 - | putative penicillin-binding protein PPA0186 228615 - 227224 - | putative cell division protein PPA0187 230099 - 228612 - | putative protein phosphatase PPA0188 230591 - 230103 - | hypothetical protein TERM 100 230288 - 230337 + g 72 -12.2 -3.05384 | gap 2 GGGTGGAGGCGTAGT CGTCGTCGATCGGTAGGGTGCAGT CGTT GCCGCGCCCTACCG-T-GACGCCG TTGGCTAGCGGAACA PPA0189 231283 - 230594 - | hypothetical protein PPA0190 232498 - 231455 - | hypothetical protein PPA0191 233534 - 232572 - | hypothetical protein PPA0192 234828 - 234127 - | hypothetical protein PPA0193 235749 - 234838 - | hypothetical protein TERM 101 235637 - 235599 - G 70 -10.3 -3.53444 | gap 2, overlap 235600 TGAGTCCCCCGGAAA TGGCCGC-GGC-TAGGAGG GGT CCTCCTACGCCCGTGGCCG CTACGGCGATACCGC TERM 102 235636 - 235600 - G 73 -13.8 -2.71924 | gap 2, overlap 235599 GAGTCCCCCGGAAAT GGCCGC-GGC-TAGGAGG GGT CCTCCTACGCCCGTGGCC GCTACGGCGATACCG PPA0194 236754 - 235924 - | putative RHS related protein PPA0195 237961 - 236696 - | putative RHS-family protein TERM 103 237695 - 237716 + gr 70 -10.1 -3.42996 | opp_overlap 237694 237697 GAGGGGGTCAGTAAG CACGGCTGG CAGA CCGGCTGTG TTGTAGTCGATGCTG PPA0196 239921 - 237966 - | RHS-family protein PPA0197 240186 - 241112 + | hypothetical protein TERM 104 242192 - 242160 - g 80 -4.1 -5.06816 | gap 1 ACGTGCGAAGAAAAA GCGGGCGAAGTCTG GCGGGG CA-ACTGCGACCGC GCAGTACCCGGGATA PPA0198 241522 - 242385 + | hypothetical protein TERM 105 242390 - 242419 + T 71 -12.1 -2.98015 | gap 1, opp_overlap 242385, overlap 242394 ATCCAAGATAGGTGC GCAC-CCGGGGCGG TGC TCGCCCCGGTGTGG TCTGTGGTAATTCCC TERM 106 242394 - 242414 + T 87 -16.1 -2.89971 | opp_overlap 242385, overlap 242390 AAGATAGGTGCGCAC CCGGGGCGG TGC TCGCCCCGG TGTGGTCTGTGGTAA TERM 107 243196 - 243209 + T 80 -4.5 -4.88067 | opp_overlap 243196 CCTCGCAGTAGTATA TTCCG GATT CGGGA TTTTTGTGGGTGGAT PPA2367 243765 - 243319 - | hypothetical protein PPA2368 244361 - 243747 - | hypothetical protein PPA2394 245037 - 244591 - | hypothetical protein TERM 108 244922 - 244912 - G 88 -6.8 -4.9792 | opp_overlap 244911 GATTGGAGAGAAAAA CAGG TCT CCTG GCTTTCCTATGCATC PPA0199 247880 - 245019 - | RHS-family protein PPA0200 250678 - 247886 - | RHS-family protein PPA0201 251520 - 250798 - | hypothetical protein TERM 109 251720 - 251689 - R 78 -6.5 -4.5852 | gap 1, overlap 251690 251714 GAACTCAAATGAAAA TGTCCGCC-CCCGG ATAGA CCGAAAGGCGGACT TGCCGCGGAGGATAC PPA0202 252255 - 251890 - | putative heat shock protein TERM 110 252866 - 252880 + G 77 -3.5 -4.90778 | overlap 252837 252867 CCGTTGTGACGGTGA TCAGC TTCTT GCTGG TTTTCTTTGGCTGAG PPA0203 252517 - 252894 + | hypothetical protein PPA0204 253133 - 255835 + | DNA polymerase III subunits gamma and tau PPA0205 255945 - 256268 + | hypothetical protein PPA0206 256299 - 256904 + | putative recombination protein RecR PPA0207 257012 - 257587 + | transcriptional regulator TERM 111 258109 - 258133 + G 75 -7.9 -4.2558 | gap 1, opp_overlap 258097 CGAGTAGCCATCGCC CGCGGC-ATC GTCGGG GATCGCCGCG TTTTGCTGGCCGATG PPA0208 257593 - 258375 + | ABC transporter ATP-binding protein PPA0209 258375 - 261014 + | putative permease PPA0210 262853 - 261018 - | membrane spanning protein TERM 112 261585 - 261569 - G 74 -6.5 -4.31433 | overlap 261570 CAGCGTGAGAAGAAA CGCCG AAGGTCA CGGCG ATGACCGCGGCAGCG PPA0211 262964 - 263764 + | putative hydrolase PPA0212 263774 - 264583 + | putative hydrolase PPA0213 264701 - 265600 + | putative ABC transporter TERM 113 266750 - 266732 - g 72 -13.2 -2.64274 | overlap 266728 AGTGGTTGAAATCCA TCGATCGG CTG CCGATCGA GAAGCAGGTCAGCAT PPA0214 265597 - 266802 + | hypothetical protein PPA0215 266814 - 267404 + | hypothetical protein TERM 114 267501 - 267527 + F 86 -4.5 -5.21709 | gap 1, opp_overlap 267504, overlap 267504 CGAGACGGGAACGAG CAACACCTCAAG CACA CTTG-GGTGTTC TTTTTTCATGTCAAC TERM 115 267504 - 267524 + F 78 -6.2 -4.69962 | gap 1, opp_overlap 267504, overlap 267501 GACGGGAACGAGCAA CACCTCAAG CACA CTTG-GGTG TTCTTTTTTCATGTC TERM 116 269134 - 269156 + G 70 -10.5 -3.53091 | opp_overlap 269126 TCGAAGATGGCACCG GGCTGGTGC ATCAG GCCCCAGCC TTTGGCGCCGACGAT ileS 268050 - 271394 + | isoleucyl-tRNA synthetase PPA0217 272459 - 271509 - | membrane associated protein PPA2396 272847 - 272440 - | hypothetical protein PPA0218 274326 - 272911 - | putative transport protein PPA0219 275456 - 274536 - | putative oxidoreductase PPA0220 275563 - 275862 + | putative regulatory protein PPA0221 276029 - 276484 + | putative translation initiation inhibitor TERM 117 276544 - 276505 - Tf 100 -22.2 -3.78934 | opp_overlap 276507 276508, overlap 276507 276508 CCGGTTCCAGAACAA CACTGTGGGGGCCAGGCG TTAA CGCCTGGCCCCCACACTT GTGGATGTGAGGTGC TERM 118 276542 - 276507 - Tf 100 -24.8 -3.4811 | opp_overlap 276507 276508, overlap 276505 276508 GGTTCCAGAACAACA CTGTGGGGGCCAGGCG TTAA CGCCTGGCCCCCACAC TTGTGGATGTGAGGT TERM 119 276507 - 276542 + TF 100 -24.8 -3.39505 | opp_overlap 276507 276505 276508, overlap 276508 GGTTCCAGAACAACA CTGTGGGGGCCAGGCG TTAA CGCCTGGCCCCCACAC TTGTGGATGTGAGGT TERM 120 276541 - 276508 - Tf 100 -28.3 -2.68545 | opp_overlap 276507 276508, overlap 276507 276505 GTTCCAGAACAACAC TGTGGGGGCCAGGCG TTAA CGCCTGGCCCCCACA CTTGTGGATGTGAGG TERM 121 276508 - 276541 + TF 100 -28.3 -2.63382 | opp_overlap 276508 276507 276505, overlap 276507 GTTCCAGAACAACAC TGTGGGGGCCAGGCG TTAA CGCCTGGCCCCCACA CTTGTGGATGTGAGG PPA0222 277268 - 276567 - | putative transcriptional regulator TERM 122 277702 - 277730 + GH 71 -7.4 -4.11394 | overlap 277703 CGAGCAGCGCGCCTG GTGTCGATGGGC GCGAA GCTCGTCGACAA TTTTGACGGTGCCAT PPA0223 277186 - 278112 + | putative endonuclease III PPA0224 278109 - 278696 + | hypothetical protein PPA0225 278693 - 279349 + | putative NTP pyrophosphohydrolase TERM 123 279350 - 279366 + T 71 -11.5 -3.18912 | AACGACATTCCTTGA GGTGCGG GTT CCGCGCC TTGATGGCTACATCA TERM 124 279386 - 279421 + T 89 -17.6 -2.75712 | opp_overlap 279389, overlap 279386 TGGCTACATCATAGG CAACGGCCCTCCCACA TAGC TGTGGGAGGGCCGTAA TAGTTAACTCAGTCG TERM 125 279418 - 279389 - T 100 -23.7 -3.1544 | opp_overlap 279386 279386 CTACATCATAGGCAA CGGCCCTCCCACA TAGC TGTGGGAGGGCCG TAATAGTTAACTCAG PPA0226 279966 - 279430 - | hypothetical protein PPA0227 281325 - 280063 - | putative sodium:proton antiporter TERM 126 280791 - 280768 - G 74 -3.2 -4.82901 | gap 1, overlap 280771 280790 GCCCGTGGAGAAAAA GACTGCGATCA CGA TGATCG-AACC GAGGTCATCGGCAAT PPA0228 282452 - 281493 - | putative methyltransferase PPA0229 282461 - 283438 + | hypothetical protein PPA0230 283435 - 284601 + | putative secretory protein PPA0231 284598 - 285368 + | hypothetical protein PPA0232 285404 - 286114 + | hypothetical protein PPA0233 286323 - 286610 + | hypothetical protein TERM 127 286606 - 286596 - f 74 -6.8 -4.27584 | ATTGGCAAGGCAAAA GGCA TGC TGCC GTGACCGGTCTGGCT PPA0234 286703 - 287017 + | hypothetical protein PPA0235 287017 - 287421 + | hypothetical protein PPA0236 287537 - 287773 + | hypothetical protein PPA0237 290098 - 287834 - | putative helicase PPA0238 290122 - 291639 + | putative transferase PPA0240 291732 - 292019 + | hypothetical protein TERM 128 292484 - 292469 - g 71 -5.4 -4.36914 | gap 1 CGTTTCCCCAGAAAA GCGG-TC GAC GATCCGC GAACTCAAGAGCCTG PPA0241 292242 - 295031 + | DNA topoisomerase I PPA0242 295033 - 296520 + | hypothetical protein PPA0243 296471 - 297157 + | putative thymidylate kinase PPA0244 297213 - 298412 + | DNA polymerase III subunit delta' PPA0245 298544 - 299350 + | hypothetical protein TERM 129 299393 - 299429 + F 100 -21.7 -3.1994 | overlap 299394 AATACGGTCAACTTT TTCACCTCGACGTCGGG ACC CTCGACGTCGAGGTGGG TTCGTGGCTGCTATA TERM 130 299394 - 299428 + F 100 -23 -2.51642 | overlap 299393 ATACGGTCAACTTTT TCACCTCGACGTCGGG ACC CTCGACGTCGAGGTGG GTTCGTGGCTGCTAT PPA0246 299425 - 300087 + | hypothetical protein PPA0247 300104 - 301786 + | putative hydrolase PPA0248 301875 - 302207 + | hypothetical protein PPA0249 303917 - 302241 - | hypothetical protein TERM 131 305273 - 305295 + G 81 -6.2 -4.8269 | overlap 305290 CGGCCAGATGGGTGC TGACGAGGGC GCT GTCCGTGTCA TTTTTGATACTTCTG PPA0250 304329 - 305678 + | putative flavin-containing amine oxidase PPA0251 305982 - 307010 + | hypothetical protein PPA0252 307495 - 307028 - | hypothetical protein PPA0255 309613 - 308567 - | hypothetical protein TERM 132 308984 - 308966 - G 73 -10.2 -3.57462 | TACCTCAGCGTCAAA CCGCTTGC CAA GCGAGCGG CCGTCACGTCGCACT TERM 133 309640 - 309601 - G 85 -16.5 -3.14683 | ACATTGTGTCATGAA CAGCATTCGGCATCCGC GGTGAT GCGGGTGTCGAATGCTG ACGTCATGACTCGCG PPA0256 310323 - 309691 - | inorganic pyrophosphatase PPA0257 310315 - 311745 + | putative carboxypeptidase PPA0258 311745 - 312680 + | hypothetical protein PPA0259 312708 - 313262 + | putative hypoxanthine phosphoribosyltransferase TERM 134 313422 - 313412 - g 78 -4.6 -4.7373 | opp_overlap 313412 GTAGTCTATGAAAAA CGCG TCC CGCA TCTTCAAAGGTCCTC PPA0260 313404 - 315557 + | putative cell division protein FtsH TERM 135 315562 - 315596 + F 100 -18.6 -3.34962 | opp_overlap 315565, overlap 315565 CAAGGTCCTGATTAT CAACGGCCTGCCGC ACATATC GCGGCAGGCCGTCG TTCTAGGCTGTCCGC TERM 136 315593 - 315565 - f 100 -19.6 -3.21099 | opp_overlap 315562 315565 GGTCCTGATTATCAA CGGCCTGCCGCA CATAT CGCGGCAGGCCG TCGTTCTAGGCTGTC TERM 137 315565 - 315593 + F 100 -18.9 -2.84298 | opp_overlap 315565, overlap 315562 GGTCCTGATTATCAA CGGCCTGCCGC ACATATC GCGGCAGGCCG TCGTTCTAGGCTGTC PPA0261 315622 - 316197 + | GTP cyclohydrolase I PPA0262 316270 - 316563 + | hypothetical protein TERM 138 316758 - 316768 + F 72 -4.6 -4.65722 | TGAGCCCTGGTTGTG GCTC GTG GGGC TTTGTTTGTGTGTGG TERM 139 316992 - 317010 + G 72 -12.4 -3.12327 | overlap 316991 GGTCGGTGATTTTAG CGCTGCAC GCC GTGCGGCG TCTTCCGTATGCCAC PPA0263 316805 - 317911 + | putative outer membrane protein A PPA0265 318707 - 318444 - | hypothetical protein PPA0264 317911 - 318549 + | hypothetical protein PPA0266 318756 - 319277 + | hypothetical protein PPA0267 319307 - 319759 + | hypothetical protein PPA0268 319949 - 320923 + | hypothetical protein PPA0270 320859 - 321536 + | hypothetical protein PPA0271 321592 - 322437 + | dihydropteroate synthase PPA0272 322498 - 322860 + | dihydroneopterin aldolase PPA0273 322857 - 323414 + | putative hydroxymethyldihydropteridine pyrophosphokinase TERM 140 323502 - 323542 + G 73 -10.4 -3.61922 | gap 1, overlap 323503 CGACCGATTGGAAGG TCATCATCGTGGCGGCCCT GTGC GGGGCCGCCCTGG-GATGG TTTGCGCTGAGTATT PPA0274 323411 - 323947 + | hypothetical protein TERM 141 324083 - 324108 + G 77 -11.1 -3.56325 | opp_overlap 324082 324078 324077, overlap 324084 324102 GGTTGAAAAGGACAC TGGCGAGCGCA GAGG TGTGCTCGCCC TTCTCATTGTGGCAA TERM 142 324084 - 324107 + G 77 -14.6 -2.73474 | opp_overlap 324082 324078 324077, overlap 324083 324102 GTTGAAAAGGACACT GGCGAGCGCA GAGG TGTGCTCGCC CTTCTCATTGTGGCA PPA0275 324030 - 324707 + | hypothetical protein TERM 143 324729 - 324759 + T 100 -19 -3.67597 | opp_overlap 324725 GCTTGCCAAATGTGA CGCGGGGTCTAGCT TCC GGCTGGGCCCCGCG TTGTTGCGTCACCCC PPA0276 325974 - 324784 - | putative NADH dehydrogenase PPA0277 326113 - 326430 + | hypothetical protein TERM 144 326464 - 326504 + F 100 -19.1 -3.54511 | gap 1, opp_overlap 326457 326458, overlap 326468 TCTGACAAGGCGAGT CGGTTGCGACGCCGGAGC GGGATA GCTCCGGCGTCGCG-CTG TTCTACTTGGGTTGT TERM 145 326468 - 326501 + F 100 -21.8 -2.59714 | opp_overlap 326457 326458, overlap 326464 ACAAGGCGAGTCGGT TGCGACGCCGGAGC GGGATA GCTCCGGCGTCGCG CTGTTCTACTTGGGT TERM 146 328075 - 328057 - g 78 -4.4 -4.73614 | overlap 328059 GACGACGAAAAGAAA CTTCTCGC CGA GCGTGAGG CCAAGGAGGAGGAGT PPA0278 326692 - 329226 + | Clp family ATP-binding protease TERM 147 329245 - 329274 + T 91 -17.9 -3.14132 | gap 1, opp_overlap 329239 329238 CCTGATAACGATGGC CGTGGCCCGGTGCA TTA TGCGCCGGGCC-CG TTCCTCACACCAGCA PPA0279 330286 - 329279 - | hypothetical protein PPA0280 331269 - 330283 - | membrane spanning protein PPA0281 332030 - 331266 - | membrane spanning protein TERM 148 332015 - 331992 - G 71 -9.6 -3.75629 | gap 1 GAGCCGCAAGGCAAA GCCGATGACGA CGA TCGCCA-CGGC GAGTAAAACCCACAT PPA0282 332153 - 332923 + | hypothetical protein PPA0283 332920 - 333540 + | allophanate hydrolase subunit 1 PPA0284 333537 - 334406 + | allophanate hydrolase subunit 2 PPA0285 334570 - 336057 + | putative sugar transporter PPA0286 336125 - 337024 + | putative cell division inhibitor TERM 149 337769 - 337781 + G 70 -4.7 -4.4648 | overlap 337769 337768 GGATCGCATGGCAGG CCCAC CTT GGGGG TTTTCTCGTCGGAAT PPA0287 337021 - 337929 + | membrane spanning protein PPA0288 338501 - 337947 - | hypothetical protein PPA0289 339231 - 338575 - | putative two component response regulator TERM 150 338801 - 338775 - G 70 -10.1 -3.55761 | gap 1 CAGTGAGGGCGGAAA GGGTCTTGCGGG CAGC CCCGCG-GACCC GTCTACCAGCGTCGC PPA0290 340543 - 339311 - | putative two-component sensor kinase PPA0291 340694 - 341314 + | hypothetical protein TERM 151 341321 - 341362 + T 100 -24.7 -2.62983 | GGAGCCTGATCAGCC CGAGGTTCAGCCACTGTCA TGGA TCACAGTGGCTGAACCTCG TGATGTCGGGGTGGG PPA0292 342408 - 341497 - | hypothetical protein TERM 152 342127 - 342154 + g 81 -14.2 -3.35073 | overlap 342128 TTCGACGATTGCCTG TGCCACTCGCAC CTCG GTGTGAGTGGCG TTCGTTAGCAGTGAT TERM 153 342128 - 342153 + g 78 -15.5 -2.60723 | overlap 342127 TCGACGATTGCCTGT GCCACTCGCAC CTCG GTGTGAGTGGC GTTCGTTAGCAGTGA PPA0293 342886 - 342413 - | PTS system, glucose/sucrose specific IIA subunit PPA0294 344577 - 342898 - | PTS system sugar-specific EII component TERM 154 342979 - 343023 + g 71 -9.2 -3.75169 | opp_overlap 342993 GGCCTGGACTCCGCC GCCGACCTCGAAGACCTCGG TCGCT CCGAGATTCTTGAGGCTGGC TTTGCTGACCTGATC TERM 155 343084 - 343058 - G 79 -14.4 -2.91264 | opp_overlap 343077 GCTTTTACTGACACA CGCAGACGCGTG ATG CACGCGTCGACG TCCTCGATGTTCTCG PPA0295 346568 - 345249 - | putative sugar transporter TERM 156 345863 - 345840 - G 75 -13.2 -2.87132 | opp_overlap 345840 GGCGGCGGCTAGATA CCCACCATCG CCAT CGATGATGGG TTTGTTGGCTTCGTC TERM 157 345840 - 345863 + g 89 -11 -4.26351 | opp_overlap 345840 GGCGGCGGCTAGATA CCCACCATCG CCAT CGATGATGGG TTTGTTGGCTTCGTC PPA0296 347653 - 346613 - | 4-hydroxythreonine-4-phosphate dehydrogenase 2 PPA0298 349000 - 347729 - | hypothetical protein PPA0299 350163 - 349234 - | DeoR family transcriptional regulator TERM 158 350016 - 350037 + g 71 -8.7 -3.79473 | gap 1 TGTGTCGGCGTCGGG CAGCTGTCGC CGT GCG-CGGCTG TTTGGGTGTTGTGCT PPA0300 351051 - 350176 - | A/G-specific adenine glycosylase PPA0301 352354 - 351044 - | glutamate-1-semialdehyde 2,1-aminomutase, HemL PPA0302 353448 - 352402 - | delta-aminolevulinic acid dehydratase PPA0303 354203 - 353478 - | uroporphyrinogen-III synthase, HemD TERM 159 353929 - 353951 + g 73 -9.1 -3.9344 | opp_overlap 353892 353928 CGCAGCGCAGCAGAG GTAGCGGCG CCGAC CGCAGCTAC TTTGATGTTGGGATT hemC 355300 - 354200 - | porphobilinogen deaminase TERM 160 354691 - 354716 + gr 78 -6.7 -4.62069 | AGGCTGCGAGCACGA CGGCGTCGAGG TCCT CCTTGCCACCG TTTTTGGCGTAGCGG PPA0305 356699 - 355251 - | putative protoporphyrinogen oxidase, HemY PPA0306 357976 - 356696 - | uroporphyrinogen decarboxylase, HemE TERM 161 358150 - 358161 + GH 71 -7.2 -4.23213 | opp_overlap 358150 CGTCTGTGAGAACGA CGCC GTTT GGCG TTTGTTCCGTGTGGC PPA0307 357887 - 359221 + | glutamyl-tRNA reductase, HemA PPA0308 359218 - 361269 + | ferrochelatase, HemH TERM 162 361933 - 361949 + G 70 -10.8 -3.44622 | CTGTAAATCTCGGTG GCGGCC CTAGC GGCCGC TTCGTTATGCGGATG PPA0310 361341 - 361973 + | hypothetical protein PPA0311 363043 - 362009 - | DNA integrity scanning protein DisA TERM 163 362722 - 362733 + g 71 -7.2 -4.15044 | CCGAGACGACTACCA CCGG CACA CCGG TTTGTTGGGAGAGCC PPA0312 364559 - 363162 - | DNA repair protein RadA TERM 164 363782 - 363804 + g 73 -4.6 -4.72272 | opp_overlap 363777 TCTCGAAGCAGCCCA CCTCGTCGGC TGG GCCGTAGCGG TTTTTCGTGGCGCGG PPA0313 366271 - 364625 - | malate dehydrogenase PPA0314 366973 - 366335 - | hypothetical protein PPA0315 367125 - 368012 + | putative AP endonuclease family protein PPA0316 368075 - 368971 + | putative proline dehydrogenase PPA0317 368971 - 369807 + | putative protease PPA0318 369582 - 370895 + | aspartate-semialdehyde dehydrogenase PPA0319 370892 - 371683 + | putative delta-1-pyrroline-5-carboxylate reductase PPA0320 371819 - 371920 + | hypothetical protein TERM 165 371985 - 372021 + G 100 -17.4 -3.78934 | gap 1, opp_overlap 371988, overlap 371988 CTCCGCAGCGGTGAA TTACG-GCCCCTCGACC CGCT GGTCGAGGGGCGCGTCA TTATTGTCACCCGAC TERM 166 372018 - 371988 - g 88 -19.1 -2.71731 | gap 1, opp_overlap 371988 371985 CGCAGCGGTGAATTA CG-GCCCCTCGACC CGCT GGTCGAGGGGCGCG TCATTATTGTCACCC TERM 167 371988 - 372018 + G 90 -19.1 -2.98545 | gap 1, opp_overlap 371988, overlap 371985 CGCAGCGGTGAATTA CG-GCCCCTCGACC CGCT GGTCGAGGGGCGCG TCATTATTGTCACCC TERM 168 372049 - 372079 + G 79 -12.6 -3.53012 | overlap 372050 GACAGGGCTGTCATT TGTGCGATGAGGTC ATC GGCCTCGTTGCACG TTTGAGACAGGAACA TERM 169 372050 - 372078 + G 73 -13.9 -2.71712 | overlap 372049 ACAGGGCTGTCATTT GTGCGATGAGGTC ATC GGCCTCGTTGCAC GTTTGAGACAGGAAC PPA0321 371940 - 372281 + | hypothetical protein PPA0323 372405 - 374120 + | uroporphyrinogen-III synthase, HemD PPA0324 374191 - 374859 + | putative phosphoglycerate mutase PPA0325 374856 - 375425 + | hypothetical protein TERM 170 375615 - 375635 + G 71 -5.4 -4.31692 | overlap 375618 GACAGCGTCGGGCAC GTACTGTG GTGGG CACAGTCC TTTTCGTGGTGGGTT PPA0326 375422 - 376183 + | cytochrome c biogenesis protein TERM 171 376292 - 376306 + G 76 -5.7 -4.60746 | GCCAGTTGACGAGCA TGAGG ACGGC CCTCA TTTTGCTCTTTTTGC PPA0327 376261 - 377772 + | putative c-type cytochrome biogenesis protein PPA0328 377769 - 378650 + | putative cytochrome c biogenesis protein TERM 172 378642 - 378663 + G 74 -6.6 -4.42386 | CTTCACTCGTATGCC GGAATCTG ACATGA CAGGTTCC TTTTCTGAATCCCGC PPA0329 378637 - 380100 + | putative sigma subunit PPA0330 380906 - 380112 - | putative short chain dehydrogenase PPA0331 382196 - 381123 - | hypothetical protein PPA0332 383111 - 382407 - | hypothetical protein TERM 173 383685 - 383699 + G 72 -11.4 -3.35867 | CCTGGTCTCGACGAT CCCAGC ATG GCTGGG TTGATTCACACTTCC PPA0333 383235 - 384635 + | mycothione/glutathione reductase PPA0334 385734 - 384718 - | putative ABC-type transporter, periplasmic component PPA0335 386504 - 385746 - | ABC-type transporter, ATPase component PPA0336 387526 - 386501 - | putative permease, FecCD transport family protein TERM 174 386772 - 386724 - G 80 -11 -3.76759 | gap 1 ACCAACCCGACGAAA CCGATCCCGCCCGAAATCGCGAC GGCG ATCGCGACCCCGGCCGAAA-CGG GGACGAGGAGCAGGA PPA0337 388651 - 387764 - | siderophore-interacting protein PPA0338 389654 - 388878 - | phosphate transport ATP-binding protein PstB PPA0339 390599 - 389673 - | phosphate transport system permease protein PstA PPA0340 391600 - 390596 - | putative phosphate transport system permease protein PstC TERM 175 391665 - 391686 + r 79 -12.9 -3.28712 | overlap 391666 ACGACTGGCGTCCTC CCGCCCCGG CGCG CCGGGGCGC TTGTCCCCGGGCAGA TERM 176 391666 - 391685 + r 84 -16.4 -2.57132 | overlap 391665 CGACTGGCGTCCTCC CGCCCCGG CGCG CCGGGGCG CTTGTCCCCGGGCAG PPA0341 392860 - 391709 - | phosphate-binding protein PPA0342 393974 - 393033 - | hypothetical protein PPA0343 396087 - 393982 - | polyphosphate kinase PPA0344 396922 - 396209 - | transcriptional regulatory protein TERM 177 397096 - 397076 - g 72 -2.5 -4.78029 | overlap 397070 TCAAGAAAACGAAAA TCCGCCT TCTCGTC ATGCGGA CTCCGAGGAGACTCC PPA0345 396981 - 397865 + | hypothetical protein PPA0346 398317 - 397880 - | D-tyrosyl-tRNA deacylase PPA0347 398513 - 399013 + | hypothetical protein PPA0348 399015 - 399956 + | putative glycine cleavage T-protein PPA0349 399997 - 401382 + | putative glycosyltransferase PPA0350 402142 - 401405 - | short chain dehydrogenase TERM 178 402194 - 402178 - R 71 -10.8 -3.62096 | opp_overlap 402158 402178 GCGGAGCATGCTAAA GCCCCC TCTGC GGGGGC TTTAGCGGATTGAGG TERM 179 402178 - 402194 + r 71 -10.8 -3.57561 | opp_overlap 402178, overlap 402158 GCGGAGCATGCTAAA GCCCCC TCTGC GGGGGC TTTAGCGGATTGAGG PPA0351 403936 - 402218 - | putative phosphoenolpyruvate-protein kinase PPA0352 404162 - 403896 - | phosphocarrier protein HPr PPA0353 404249 - 405061 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PPA0355 405915 - 405511 - | putative PTS family protein ispF 405058 - 405564 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PPA0356 406113 - 406406 + | putative phosphotransferase enzyme TERM 180 406470 - 406439 - T 100 -16 -3.99806 | opp_overlap 406439 ACAAGGCATGAGAAA CGGGGATTCACC CGAAGTGT GGTGAATCCCCG TTTTCGCAGTGAGAA TERM 181 406439 - 406470 + T 100 -16 -4.11216 | gap 1, opp_overlap 406439 ACAAGGCATGAGAAA CGGGGATTCACC-CG AAG TGTGGTGAATCCCCG TTTTCGCAGTGAGAA PPA0357 406975 - 406490 - | putative transcriptional regulator TERM 182 406778 - 406753 - G 78 -14.1 -3.14344 | CATTGGTCTTACGAA GGACCTCGAAA ACAT TTTCGAGGCCC TCGTCGTCAACGACG PPA0358 407115 - 407720 + | hypothetical protein PPA0359 408453 - 407773 - | response regulator TERM 183 407858 - 407879 + g 71 -5.9 -4.34402 | ATCTTTGCGCGCAGC CTTTTGATG TGCA CGTCAAGAG TTTTAGTGTCGCCAA PPA0360 409631 - 408450 - | putative sensor kinase TERM 184 408602 - 408612 + g 71 -6.8 -4.18018 | GCGACAATCCCAGAC CGGT TCC ACCG TTTTCCCTGGAACGG PPA0361 409714 - 410460 + | putative phosphate transport system protein TERM 185 410469 - 410503 + F 100 -17.9 -3.88498 | GTACTGATCAATCTG CCCCTCACGTCGGCG TTTCC CGTCGGTGTGAGGGG TTTGCTGTGTCGCAG PPA0363 410606 - 411676 + | polysaccharide deacetylase TERM 186 411732 - 411695 - T 89 -17.2 -3.06183 | gap 2, opp_overlap 411695 TCTAGCTTCATGCAA CTCGACGGTGCC-CC-GA TATT TCTGGCGGCACCGTCGAG TTGCATCAAGCAGCT TERM 187 411695 - 411732 + T 89 -17.2 -3.05463 | gap 2, opp_overlap 411695 TCTAGCTTCATGCAA CTCGACGGTGCC-CC-GA TATT TCTGGCGGCACCGTCGAG TTGCATCAAGCAGCT PPA0364 412517 - 411768 - | phosphoglyceromutase PPA0365 413100 - 412642 - | putative PTS system PPA0366 413638 - 413345 - | putative phosphotransferase enzyme PPA0367 414840 - 413845 - | L-asparaginase I PPA0368 416289 - 414841 - | amino acid permease TERM 188 415735 - 415771 + g 74 -13.1 -3.14132 | opp_overlap 415758, overlap 415739 CGTGACGATGGCCCA GATGGCCGCGATCAT GAACAGG ATGATCGCGGCTACC TTGATAGCAGCGAAC TERM 189 415739 - 415767 + g 76 -14.7 -2.56596 | opp_overlap 415758, overlap 415735 ACGATGGCCCAGATG GCCGCGATCAT GAACAGG ATGATCGCGGC TACCTTGATAGCAGC TERM 190 415806 - 415792 - G 89 -10 -4.43879 | opp_overlap 415790, overlap 415786 415781 AGCAGCGAACCAAAA TTCGGC CTC GCCGAA CATCTTCACGCTCAA TERM 191 416553 - 416528 - R 78 -3.2 -5.11063 | gap 1, opp_overlap 416528, overlap 416544 AGGAGCGAAGAAAAA GGGCAG-CGAC GAGAA ATCGACGGCCC ATGTTCTGTTCTTTG TERM 192 416586 - 416544 - R 100 -16.4 -3.97947 | opp_overlap 416528, overlap 416528 GGCAGCGACGAGAAA TCGACGGCCCATGTTCTG TTCTTTG CAGAACGTGGACCGCCGA TCGAAACGGTGCGGA glyA 418140 - 416665 - | serine hydroxymethyltransferase TERM 193 417494 - 417533 + g 77 -11.3 -3.57792 | opp_overlap 417490 AGCGGCTTAAACTCG CGGGCCAGCTCAGCGAC CTTGTC GTAGTCGAGCAGGCCCG TTTGCGGATCGGTGC TERM 194 418239 - 418217 - R 88 -15.6 -3.59262 | GGCTATAGCCTGAAA GGACGGCGAA CGG CTCGCCGTCC TGCCACGGATCGGAT PPA0370 419354 - 418254 - | carbohydrate kinase PPA0371 419998 - 419351 - | KHG/KDPG aldolase fabG 420201 - 420977 + | 3-ketoacyl-(acyl-carrier-protein) reductase PPA0373 420943 - 421338 + | putative oxidoreductase TERM 195 422172 - 422194 + F 77 -13.4 -2.94099 | GGGTATCGATCTGGC CGCCGATCGC CTC GAGATCGGCG TGTGTGCTCAGCACA PPA0376 423025 - 423681 + | putative glycosyl hydrolase TERM 196 423745 - 423717 - T 100 -23.2 -3.83502 | opp_overlap 423717, overlap 423734 CAGCTGGACAGGAAA CGGCCCGGTCGC ATGAA GCGACCGGGCCG TTCGTCTCACAGGTG TERM 197 423717 - 423745 + T 100 -23.2 -3.2614 | opp_overlap 423717 423734 CAGCTGGACAGGAAA CGGCCCGGTCGC ATGAA GCGACCGGGCCG TTCGTCTCACAGGTG PPA0377 424591 - 423884 - | hypothetical protein TERM 198 424082 - 424051 - G 100 -21 -2.79796 | GCGGATCCCACCACA CGTGGTAGGTGTCG ACGA CGACACCCACCACG TCAGGGGAGAAGGGT PPA0378 425408 - 424584 - | putative oxidoreductase PPA0379 425575 - 425880 + | putative dehydrogenase PPA0380 428375 - 425934 - | hyalorunate lyase PPA0381 428537 - 429409 + | hypothetical protein TERM 199 429950 - 429978 + GT 82 -14.5 -2.87132 | GCGTGGTGAGTCCGA CCTGGGCCCGCGC ATC GTGTGTGCCCAGG TCTGTCACCAAGGAA PPA0382 429195 - 430067 + | hypothetical protein PPA0383 431268 - 430312 - | putative tRNA/rRNA methyltransferase cysS 432754 - 431282 - | cysteinyl-tRNA synthetase PPA0385 432761 - 432979 + | hypothetical protein PPA0386 434408 - 432990 - | hypothetical protein TERM 200 433065 - 433089 + g 93 -7.7 -4.92757 | overlap 433066 GATAGCTTCGGCATG GGCCTCCCACG GGT CGTAGGGGGCG TTTTCTTCTTCGTCC TERM 201 433066 - 433088 + g 74 -11.2 -3.5457 | overlap 433065 ATAGCTTCGGCATGG GCCTCCCACG GGT CGTAGGGGGC GTTTTCTTCTTCGTC TERM 202 434035 - 433988 - G 71 -7.6 -4.02817 | gap 1, opp_overlap 433997, overlap 433973 433991 GTCGCACAAGAAGAA CGACGAGGGCGTCAAGGAGCCGC ATG ACGGTTCCTTGACGCACAC-CAG AATGGAAAAGGGACC TERM 203 434033 - 433991 - G 72 -12.6 -3.05496 | opp_overlap 433997, overlap 433988 GCACAAGAAGAACGA CGAGGGCGTCAAGGAGCCGC ATG ACGGTTCCTTGACGCACACC AGAATGGAAAAGGGA PPA0387 434660 - 435178 + | hypothetical protein PPA0388 435190 - 435375 + | hypothetical protein PPA0389 435375 - 435788 + | hypothetical protein PPA0390 435790 - 436344 + | hypothetical protein PPA0391 436341 - 437057 + | hypothetical protein TERM 204 437062 - 437106 + F 70 -12.3 -2.83715 | gap 3, opp_overlap 437082 TGCTCGCCTAAGGTG CGCT-G--GCGGTCGAGGACAC AGAA GTGCCCTCGACCGCTGCTAGCG TCTAATCATGGTCAG PPA0392 437114 - 437689 + | putative RNA polymerase sigma factor PPA0393 437680 - 438204 + | hypothetical protein PPA0394 438197 - 438550 + | hypothetical protein TERM 205 438604 - 438566 - T 100 -23.2 -3.794 | opp_overlap 438566 TCTGAACCCATGAAA CACGACGAGGCCCCCAGT CAT ACCGGGGGCCTCGTGGCG TTCATCGAGGGTCAG TERM 206 438566 - 438604 + T 100 -18.8 -3.14931 | opp_overlap 438566 TCTGAACCCATGAAA CACGACGAGGCCCCCAGT CAT ACCGGGGGCCTCGTGGCG TTCATCGAGGGTCAG PPA0395 439935 - 438616 - | ABC transporter ATP-binding protein TERM 207 439790 - 439771 - G 71 -7.8 -4.07687 | overlap 439772 ATCCGTTGTGGAAAA TCGGTGAC GGAT GTCACCGG GTCCCTCCGAGGTTT PPA0396 441875 - 440439 - | L-serine dehydratase TERM 208 441201 - 441167 - G 82 -12.1 -3.61715 | gap 1 GACCGCCCGGAAGAA CGCCGGCGCGCGAGCA GCCG CGCTCG-ACGCAGGCG TGCATGACTGCCCAG PPA0397 442217 - 444526 + | oxidoreductase TERM 209 444651 - 444623 - g 71 -9.5 -3.71848 | overlap 444624 444626 CTCGTCGAGCAAGAA GGAGGCTGGCAGT GGG ACCGCCAGCATCG CCCCTGACACCTCGG TERM 210 445002 - 445016 + G 80 -10 -4.07568 | GTCCCCAAGGACTTC GACACC ATT GGTGTC TTTTACAACAAGAAA TERM 211 445475 - 445458 - g 75 -2.7 -5.00616 | gap 1, overlap 445466 GTCCTGCCCAAAAAA GACAG-GA AGG CCACTGTC ATTCACGGCCTGGGA PPA0398 444549 - 445841 + | putative sugar-binding protein PPA0399 445838 - 446794 + | sugar ABC transporter PPA0400 446796 - 447677 + | putative transport system permease protein TERM 212 447796 - 447808 + F 73 -3.3 -4.74801 | overlap 447776 TGTCCTGACGGTGCC CAGGC GAG GCCTC TTTTTCGTAACGTTC tdh 448031 - 449068 + | L-threonine 3-dehydrogenase PPA0403 449094 - 450290 + | 2-amino-3-ketobutyrate coenzyme A ligase PPA0404 451230 - 450307 - | putative substrate-binding protein PPA0405 451947 - 451252 - | ABC transporter-associated permease PPA0406 452591 - 451944 - | ABC transporter-associated permease PPA0407 453424 - 452588 - | putative ABC transporter ATP-binding subunit PPA0408 453574 - 454374 + | hypothetical protein PPA0409 454390 - 454761 + | hypothetical protein PPA0410 455307 - 454792 - | hypothetical protein PPA0411 455425 - 456441 + | zinc-binding dehydrogenase PPA0412 456507 - 457520 + | putative ABC transporter ATP-binding protein PPA0413 457517 - 458101 + | putative permease PPA0414 458387 - 458088 - | hypothetical protein PPA0415 458331 - 459497 + | putative sensor histidine kinase, two-component system PPA0416 459502 - 460122 + | two-component system response regulator PPA0417 461102 - 460395 - | phosphoglycerate mutase family protein PPA0418 461019 - 462047 + | cobalamin biosynthesis CobD/CbiB protein PPA0419 462065 - 463519 + | cobyric acid synthase PPA2397 463550 - 463849 + | hypothetical protein TERM 213 464171 - 464188 + G 76 -6.9 -4.57474 | overlap 464173 CCGTCGCCCTTGCCA CCGTCGG TGAT CCGACTG TTTTCTCTACCTTCA PPA0420 463846 - 464601 + | tetrapyrrole methylase, putative precorrin-2 C20-methyltransferase, CbiL PPA0421 464598 - 465569 + | tetrapyrrole methylase, putative precorrin-3 methylase, CbiF TERM 214 465772 - 465784 + G 70 -3.3 -4.72333 | overlap 465771 CGTTGTTATCGCCTC CGGTG ACC CGCTG TTTTTCGGTGTGGTT TERM 215 467933 - 467901 - g 86 -14.9 -3.40403 | overlap 467902 GGTGTGGCATGACAA CCTTGGTTGTCGTCG GCT CGACGACGACCAAGT ACGTCAGCTCCGGTG TERM 216 467932 - 467902 - g 85 -18.4 -2.64099 | overlap 467901 GTGTGGCATGACAAC CTTGGTTGTCGTCG GCT CGACGACGACCAAG TACGTCAGCTCCGGT PPA0422 465566 - 468136 + | tetrapyrrole methylase, putative CbiE/G/H fusion protein TERM 217 468682 - 468666 - g 75 -7.9 -4.25104 | opp_overlap 468675 GTTCTGGGAGGAAAA CGACCTG TCG CGGGTCG AGCCTGCTTTCATTC PPA0423 468133 - 469401 + | cobalamin synthesis protein, fusion CysG+CbiX PPA0424 469443 - 470309 + | hypothetical protein TERM 218 470436 - 470385 - T 77 -11.8 -3.55444 | gap 1, opp_overlap 470390, overlap 470386 TTTGCAGTGTGGAAA CGTCACACTACAACTCACACTTCAA ATT TTGCAGTGTCAGTTGCAGTGTGG-G TTACAGTGTTTGGGG TERM 219 470436 - 470386 - T 70 -12 -2.73124 | opp_overlap 470390, overlap 470385 TTGCAGTGTGGAAAC GTCACACTACAACTCACACTTCAA ATT TTGCAGTGTCAGTTGCAGTGTGGG TTACAGTGTTTGGGG TERM 220 470390 - 470432 + T 74 -13.6 -2.55267 | opp_overlap 470385 470386 AGTGTGGAAACGTCA CACTACAACTCACACTTCAA ATT TTGCAGTGTCAGTTGCAGTG TGGGTTACAGTGTTT PPA2398 470928 - 470521 - | hypothetical protein PPA0425 470958 - 472022 + | FecCD-family membrane transport protein PPA0426 472019 - 472810 + | Fe uptake system permease TERM 221 473718 - 473699 - g 76 -5.8 -4.72272 | gap 1 CCCGGCGACCAAAAA TCTTGCTGC AGT GCAG-AAGA AGCGCTTCCTGAACC PPA0427 472812 - 473882 + | putative iron transport lipoprotein PPA0428 475185 - 473959 - | AAA family ATPase TERM 222 473997 - 474009 + g 81 -6.2 -4.86001 | CGGGAAGCGATTCGA GCCG ATCGC CGGC TTTTTGTCCCGTGCT cobH 475931 - 475278 - | precorrin-8X methylmutase TERM 223 475506 - 475547 + g 71 -9.3 -3.78597 | opp_overlap 475506 AAGCACTCGAAACAG CGCGGTGGGGGCATTGCCG ATAG CGACAATGGCTCCGTCGAG TTTGCCTTCCTCGGT PPA0430 476237 - 476920 + | cobalt transport protein CbiM PPA0432 476913 - 477347 + | cobalt transport protein CbiN TERM 224 477409 - 477351 - g 74 -11.4 -3.44319 | overlap 477354 TCGAAGTCATGACAA TTACCTCTCTCGACGACGCCGCCTGGGA TTC CCCCTGGCGGCGTCGCCCGGTCGGGGAA AAAGTCGCCCTATCG TERM 225 477406 - 477354 - g 70 -13.1 -2.87014 | overlap 477351 AAGTCATGACAATTA CCTCTCTCGACGACGCCGCCTGGGA TTC CCCCTGGCGGCGTCGCCCGGTCGGG GAAAAAGTCGCCCTA TERM 226 478110 - 478094 - g 91 -13.7 -3.72695 | ACCTTGCCCATCAAA CGCACCG GTT CGGTGCG ATACAAGATCATCGT PPA0433 477344 - 478189 + | cobalt transport protein CbiQ PPA0434 478186 - 479022 + | membrane associated cobalt transport protein CbiO PPA0435 479075 - 479764 + | hypothetical protein PPA0436 480387 - 479791 - | precorrin 8 decarboxylase CbiT PPA0437 480617 - 481231 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 227 481565 - 481594 + G 77 -14.3 -2.70932 | CCAGCGCCGAGATCG CCACGACGACCCG AACT CCGGTTGTCGTGG TCGTTGACACCGCGC PPA0438 481231 - 483654 + | cobyrinic acid a,c-diamide synthase PPA0439 483664 - 484440 + | uroporphyrinogen III methyltransferase PPA0440 485212 - 484460 - | cobalt-precorrin-6x reductase TERM 228 486199 - 486211 + GH 78 -4.7 -4.79352 | GAGGTTTTGAGCACG CCGCC ATG GCCGG TTTTATTCTGGCTGC TERM 229 486939 - 486951 + GH 80 -3.3 -5.03994 | overlap 486940 GCCATCCGTGGTACC CGACG TGA CGTCA TTTTTGTCTCTAACG PPA0441 485439 - 487106 + | phosphoribosyltransferase, cobalamin biosynthesis enzyme, fusion CobTU PPA0442 487055 - 487942 + | putative cobalamin-5-phosphate synthase, CobS PPA0443 487939 - 488703 + | metal binding protein TERM 230 488862 - 488920 + T 75 -11.7 -3.18366 | gap 1, overlap 488863 TAGAGTCGTGATGAC GTTAGGC-CATCATGGCGGTGCCGACGC CCGA GCATCAGCGCCGCCATGATGAGTCTCGG TGTGTTACTTCGCCC TERM 231 488863 - 488919 + T 81 -15.2 -2.50699 | gap 1, overlap 488862 AGAGTCGTGATGACG TTAGGC-CATCATGGCGGTGCCGACGC CCGA GCATCAGCGCCGCCATGATGAGTCTCG GTGTGTTACTTCGCC PPA0444 490562 - 488925 - | hypothetical protein TERM 232 489570 - 489590 + g 80 -11.2 -3.72893 | GATCTTCGGCTGATG CTTCCACC CGGCC GGTGGAAG TTTGATGGCAGCGTA PPA0445 490993 - 491181 + | hypothetical protein ulaA 492808 - 491219 - | ascorbate-specific PTS system enzyme IIC PPA0447 493787 - 492858 - | phosphotransferase system protein, mannitol/fructose-specific IIA subunit TERM 233 494662 - 494634 - H 74 -8.1 -4.18908 | ACAGGGGTAAAATAA TACTGCGCTTCTC TTT AAGGGGCGCAGTA TAGCCCGCAAAAGGA TERM 234 494977 - 494992 + G 88 -7.5 -4.91109 | AGTTGGACATCATGG GGGCG CAGAGT CGCCC TTTTTGTGCTGCGCC PPA0448 494686 - 495183 + | hypothetical protein PPA0449 495192 - 495638 + | hypothetical protein TERM 235 495687 - 495677 - T 71 -6.8 -4.15044 | opp_overlap 495677 CTGCGCGCCAAGAAA CCCA TGC TGGG TTTCTACTGCTGTGG PPA0450 496241 - 495789 - | S-ribosylhomocysteinase PPA0451 497490 - 496309 - | phosphomannose isomerase PPA0452 497819 - 497535 - | hypothetical protein groEL 498152 - 499786 + | chaperonin GroEL TERM 236 499805 - 499848 + T 83 -13.9 -3.62046 | gap 1, overlap 499808 499809 TGCATTGCCTTCGCT GAT-TTGAGGTGGGGCGGTC CTAGT GGCCGCCCCACCTCGCTGTC TTGTTACAAACGTGG TERM 237 499808 - 499844 + T 93 -18 -3.26444 | overlap 499805 499809 ATTGCCTTCGCTGAT TTGAGGTGGGGCGGTC CTAGT GGCCGCCCCACCTCGC TGTCTTGTTACAAAC TERM 238 499809 - 499843 + T 100 -21.5 -2.55545 | overlap 499808 499805 TTGCCTTCGCTGATT TGAGGTGGGGCGGTC CTAGT GGCCGCCCCACCTCG CTGTCTTGTTACAAA PPA0454 500997 - 499921 - | transaldolase PPA0455 501842 - 501099 - | GntR family transcriptional regulator PPA0456 502057 - 503046 + | carbohydrate kinase PPA0457 502890 - 503930 + | hypothetical protein PPA0458 503927 - 504799 + | putative myo-inositol catabolism protein IolB PPA0459 504802 - 506700 + | thiamine pyrophosphate-requiring enzyme, putative acetolactate synthase PPA0460 507159 - 506845 - | hypothetical protein TERM 239 507701 - 507662 - g 72 -12.8 -3.04792 | opp_overlap 507660 507657, overlap 507640 CGATCATGTTCAAGA TGCGCCAGCTCGTGCTAG ACCA CCAGGACGAGATGGCGCG GCTCATTGTCGAGGA PPA0461 507448 - 508941 + | methylmalonic acid semialdehyde dehydrogenase TERM 240 508961 - 508987 + F 86 -15.9 -2.76453 | overlap 508952 GCGTATGTAGATCGA GGCGGTCAGGA CCTGT TCCTGGCCGCC TCGTTACCCTTGTGC PPA0462 509037 - 510017 + | LacI family transcription regulator TERM 241 510724 - 510754 + G 76 -12.6 -3.34344 | gap 1, overlap 510724 GCATGGCGCTATCGA GG-CCCTCAGGGC TCGGGC GCCCTGGGGGACC TTGGTTCGCACATCA PPA0463 510154 - 511368 + | dehydrogenase, putative myo-inositol 2-dehydrogenase PPA0464 511413 - 512411 + | sugar phosphate isomerase/epimerase TERM 242 513232 - 513246 + G 71 -5.6 -4.36063 | CGACGTGTTCGAAGC CCTACG TGA CGTCGG TTTTGATGGTGTTAT PPA0465 512483 - 513349 + | myo-inositol catabolism IolH protein PPA0466 513559 - 514770 + | putative myo-inositol 2-dehydrogenase TERM 243 515121 - 515081 - g 80 -14.8 -3.01712 | gap 1 GGTCTCGCCTTAACA CCGATGCAGGAGGGCGCCA TCGG CGGCACACTCCT-CATCGG CGCTGCAATTGGCGC PPA0467 514880 - 516526 + | putative sugar transporter YfiG TERM 244 517056 - 517113 + T 83 -14.2 -3.05463 | opp_overlap 517058 517059 GCCAGTGTGGAGATT AACGGAAC-CGCATGGTGGCCCGTCCTC CGCG GAGGACGGGCCACCAT-CGTGATCCAAC TTGGCTCAGCGGCGT TERM 245 517111 - 517058 - T 100 -23.4 -3.2614 | opp_overlap 517056, overlap 517059 CAGTGTGGAGATTAA CGGAAC-CGCATGGTGGCCCGTCCTC CGCG GAGGACGGGCCACCAT-CGTGATCCA ACTTGGCTCAGCGGC TERM 246 517110 - 517059 - T 100 -24.7 -2.5547 | opp_overlap 517056, overlap 517058 AGTGTGGAGATTAAC GGAAC-CGCATGGTGGCCCGTCCTC CGCG GAGGACGGGCCACCAT-CGTGATCC AACTTGGCTCAGCGG PPA0468 517999 - 517136 - | putative myo-inositol catabolism protein PPA0469 518116 - 519183 + | putative myo-inositol 2-dehydrogenase PPA0470 519116 - 520198 + | hypothetical protein PPA0471 520176 - 520871 + | putative copper homeostasis protein CutC PPA0472 521889 - 520885 - | hypothetical protein PPA0473 524017 - 521933 - | superfamily II DNA/RNA helicase TERM 247 522376 - 522395 + g 70 -3.5 -4.72272 | overlap 522379 CACGATGACGCTCGA CCAGGTC TCTCAC GACCTTG TTTTTAATGGGGAGG TERM 248 523044 - 523011 - G 86 -12.4 -3.85698 | overlap 523013 CCGCCGTCCCAGAAA GACTGCGCCGCTAC TTTCTG GTAGGGGCGCAGGC TCCAACCATCCTCGT TERM 249 523042 - 523013 - G 86 -13.6 -3.51934 | overlap 523011 GCCGTCCCAGAAAGA CTGCGCCGCTAC TTTCTG GTAGGGGCGCAG GCTCCAACCATCCTC PPA0474 526352 - 524223 - | DeaD/DeaH box family protein PPA0475 527104 - 526349 - | hypothetical protein TERM 250 526512 - 526498 - G 73 -10 -3.61398 | overlap 526501 TGGCCCCGCCAATAA TGACGG CGA CCGTCA CCGCAGTAAGAGCCT nagB 527278 - 528063 + | glucosamine-6-phosphate deaminase PPA0477 528210 - 528593 + | cold shock protein TERM 251 528861 - 528879 + G 72 -11 -3.39895 | CTGTCAATGAGGTTG TCCTCGTC CCT GGCGAGGA TTCCTTACTCGCCCC PPA0478 528593 - 529393 + | hypothetical protein PPA0479 529703 - 529431 - | hypothetical protein TERM 252 530010 - 529966 - g 72 -2.1 -4.81212 | opp_overlap 529966 529976 TTGATGACAACAAAA TCATGGTGATGGCAGTGAC TGCCTTC GTGGCTGCCATCATGACGA TTGCTATGGGTGTCT PPA0480 529719 - 531230 + | putative xanthine/uracil permease PPA0481 531840 - 531205 - | hypothetical protein PPA0482 532040 - 533062 + | hypothetical protein PPA0483 534177 - 533059 - | phosphoserine aminotransferase TERM 253 533579 - 533590 + g 78 -4.4 -4.85599 | opp_overlap 533587 AGCCACAATCCACCA TCTG AAGA CAGA TTTTTCTGCGGTGAA TERM 254 533880 - 533901 + g 76 -6.5 -4.56597 | gap 1, overlap 533887 TTCGCGTGAATTCCC CGTAGACGCC GGT GGCGGCT-CG TTTTTCCACGAGGGA PPA0484 534270 - 535400 + | N-acetylglucosamine-6-phosphate deacetylase PPA0485 535554 - 536252 + | repressor TERM 255 536573 - 536587 + G 70 -10 -3.50869 | GAGAGGGGAGCTCTT GGGGAT CTC ATCCCC TTGTATGAGCTCATG PPA0486 536291 - 537352 + | hypothetical protein PPA0487 537474 - 537839 + | thiol-disulfide isomerase TERM 256 537869 - 537922 + F 100 -18.1 -2.71268 | gap 1, opp_overlap 537868 537867, overlap 537873 537879 TACCCAGCTGAAACG CGGAGCTCAGGGCCGGCGGCAGGTGG TAG CGTCCTGCTGTCGGCC-TGTGCTTCG TCATATCTCATGAGA TERM 257 537873 - 537918 + F 82 -13.9 -3.26813 | gap 1, opp_overlap 537868 537867, overlap 537869 537879 CAGCTGAAACGCGGA GCTCAGGGCCGGCGGCAGGTGG TAG CGTCCTGCTGTCGGCC-TGTGC TTCGTCATATCTCAT TERM 258 537879 - 537913 + F 84 -15.6 -2.94962 | opp_overlap 537868 537867, overlap 537873 537869 AAACGCGGAGCTCAG GGCCGGCGGCAGGTGG TAG CGTCCTGCTGTCGGCC TGTGCTTCGTCATAT PPA0488 538011 - 539627 + | sugar transporter family protein PPA0489 540108 - 541505 + | UTP--glucose-1-phosphate uridylyltransferase TERM 259 541690 - 541670 - g 74 -12.5 -3.18681 | overlap 541650 GCCGAATTCCAGCAA GCCGGGCGA TCT TGGCCCGGC CCGATTCCCGACGAT PPA0490 541532 - 541873 + | hypothetical protein PPA0491 542264 - 541896 - | large conductance mechanosensitive channel PPA0492 543035 - 542376 - | hypothetical protein PPA2407 543417 - 543115 - | hypothetical protein PPA0493 544082 - 543495 - | 5-formyltetrahydrofolate cyclo-ligase TERM 260 545224 - 545247 + G 72 -11.8 -3.31322 | GTCTCCTTCATGGCC TTTGTGCAGC CTCT GCTGCGCAAA TTGTCCGGGCTTCCG PPA0494 544192 - 545499 + | putative molybdopterin biosynthesis enzyme PPA0495 545537 - 546211 + | putative ribosomal-protein-alanine acetyltransferase PPA0496 546284 - 547087 + | hypothetical protein PPA0497 548488 - 547811 - | putative component of anaerobic dehydrogenase PPA0498 548970 - 548485 - | molybdenum cofactor biosynthesis protein PPA0499 550270 - 548936 - | molybdenum cofactor biosynthesis protein PPA0500 550689 - 550267 - | molybdopterin synthase MoaE PPA0501 550929 - 550690 - | putative molybdopterin converting factor moaA 551972 - 550932 - | molybdenum cofactor biosynthesis protein A TERM 261 550960 - 550980 + g 72 -11.2 -3.29144 | opp_overlap 550952 GCAGACATGCGACGC CGGGAGTT GGCAA AACTCCCG TTGTCAACCCCGTGG TERM 262 551412 - 551402 - G 74 -6.8 -4.42386 | GGTCCAGGCAGAAAA CGAG CAA CTCG GGAATGTCACGGCGG PPA0503 552215 - 552643 + | putative molybdopterin-binding protein PPA0504 552649 - 553419 + | putative molybdate-binding protein precursor PPA0506 555911 - 555291 - | putative regulator PPA0505 553543 - 555357 + | ABC transporter, putative molybdenum transport system PPA0507 556726 - 556013 - | nitrate reductase gamma subunit PPA0508 557394 - 556723 - | nitrate reductase delta subunit PPA0509 558919 - 557396 - | nitrate reductase beta chain PPA0510 562656 - 558919 - | nitrate reductase alpha chain TERM 263 560234 - 560247 + g 72 -2.3 -4.74132 | overlap 560224 GGATGCATGTCGGTG CTCGA CAAG TCGTG TTTTTCATACCATGT PPA0511 564030 - 562714 - | nitrate/nitrite transporter PPA0512 564217 - 564891 + | putative molybdopterin-guanine dinucleotide biosynthesis protein A PPA0513 565188 - 565688 + | molybdenum cofactor biosynthesis protein TERM 264 565755 - 565779 + F 72 -8.5 -3.91506 | overlap 565752 CGCACGTGCAGGCGT CCCTTCGGTTC GCT GGATCGTAGGG TGTTTTTAAACGTGG PPA0514 565858 - 566133 + | putative molybdopterin-guanine dinucleotide biosynthesis protein PPA0515 567207 - 566197 - | anaerobic dimethyl sulfoxide reductase chain C PPA0516 567848 - 567207 - | anaerobic dimethyl sulfoxide reductase, chain B PPA0517 570576 - 568015 - | anaerobic dimethyl sulfoxide reductase chain A PPA0518 571875 - 571030 - | putative molybdopterin biosynthesis protein MoeB thiG 572705 - 571872 - | thiazole synthase PPA0520 574270 - 573023 - | FAD dependent oxidoreductase PPA0521 574966 - 574652 - | putative metal-transport protein PPA0522 576671 - 575226 - | putative uracyl permease PPA0523 578337 - 576754 - | putative dolichyl-phosphate-mannose-protein mannosyltransferase TERM 265 579201 - 579163 - g 79 -13.1 -3.55801 | gap 1 ATCAAGCGCTCTAAA GCTGTCG-CCCAGGTGGC CCGC GCCACCGGAGTCGACCGC CACGATCTCTACGAC PPA0524 578398 - 579258 + | putative tetrapyrrole (corrin/porphyrin) methylase PPA0525 579255 - 580163 + | DNase ksgA 580160 - 581056 + | dimethyladenosine transferase PPA0527 581080 - 582051 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase PPA0528 582048 - 582587 + | MarR family regulator PPA0529 583252 - 582569 - | TetR family transcriptional regulator PPA0530 583502 - 584800 + | N-acetylglucosamine-1-phosphate uridyltransferase PPA0531 584797 - 585765 + | ribose-phosphate pyrophosphokinase TERM 266 585956 - 585981 + G 70 -3.1 -4.63218 | overlap 585954 585959 TATTGCGCGGGGACC GTGGCGACGGC CGTC GCCCTAGCTGC TTTTGTTACGAGCGG PPA0532 585914 - 587191 + | hypothetical protein PPA0533 587227 - 587796 + | hypothetical protein PPA0534 587816 - 588412 + | hypothetical protein PPA0535 588519 - 589208 + | ribosomal L25P family protein TERM 267 589378 - 589412 + G 90 -15.1 -3.44051 | gap 1 CCGCTTGAGTTCGGC CGGTCTGGGCGTACCG GCTG TGG-ATGCCCAGACCG TTATCCTGATGCGCA PPA0536 589205 - 589807 + | peptidyl-tRNA hydrolase PPA0537 590089 - 589847 - | D-lactate dehydrogenase PPA0538 590338 - 590153 - | putative D-lactate dehydrogenase TERM 268 590269 - 590279 + g 85 -6.8 -4.80959 | opp_overlap 590268, overlap 590259 CCAAGTCGACGAACT CGAC GAT GTCG TTTTGTTGTGGGTTC TERM 269 590833 - 590801 - R 100 -17.1 -4.0641 | GTGTAGCGACACAAA CGTGGTTGGGCGC GCAGTTT GCACCCAACCACG AAGGTCTGCCTCAGC TERM 270 590867 - 590881 + r 71 -11.4 -3.24924 | opp_overlap 590867, overlap 590865 TGAAGTCGGTAATGA CGGTGG TTC CCACCG TGTTGTAGGTGGACA PPA0539 591899 - 590844 - | alcohol dehydrogenase TERM 271 591764 - 591800 + g 73 -9.9 -3.59979 | opp_overlap 591791, overlap 591762 CTGGCCACTCGCCCT GCCAGCCGTGCCAGTCG CTT CGACAGACGCCGCAGGC TTTCACCTCGACGAC PPA0540 593413 - 592274 - | hypothetical protein PPA0541 593435 - 597103 + | transcription-repair coupling factor PPA0542 597165 - 597680 + | hypothetical protein PPA0543 597689 - 598327 + | nucleoside triphosphate pyrophosphohydrolase PPA0544 598443 - 598973 + | hypothetical protein eno 599061 - 600341 + | phosphopyruvate hydratase TERM 272 600412 - 600380 - f 100 -20.6 -2.63913 | opp_overlap 600382, overlap 600382 CAGCACCTGACATGA CACGACCGTCCCGG TACTG CCGGGGCGGTCGTG TCATGATGGACCACG TERM 273 600382 - 600410 + F 100 -20.3 -2.82516 | opp_overlap 600382 600380 GCACCTGACATGACA CGACCGTCCCGGT ACT GCCGGGGCGGTCG TGTCATGATGGACCA TERM 274 600410 - 600382 - f 89 -17.4 -2.85999 | opp_overlap 600382, overlap 600380 GCACCTGACATGACA CGACCGTCCCGG TACTG CCGGGGCGGTCG TGTCATGATGGACCA PPA0546 600428 - 601081 + | putative septum formation initiator PPA0547 601089 - 601631 + | hypothetical protein PPA0548 601628 - 602560 + | Ppx/GppA phosphatase family hydrolase PPA0549 602792 - 603625 + | membrane spanning protein TERM 275 603639 - 603667 + T 100 -23.3 -3.22774 | GACATTGACGCCAGA GGGGGCTTGGTCA TCG TGACCAAGCCCCC TTCGTCATGCCTGTG PPA0550 604392 - 603697 - | hypothetical protein PPA0551 605434 - 604469 - | hypothetical protein PPA0552 605764 - 605967 + | hypothetical protein TERM 276 607674 - 607688 + T 100 -8.6 -4.87665 | GTGCGGCTGGATCAC CTCCTT TCT AAGGAG TTTTTGTGAGTGGAA TERM 277 609878 - 609867 - T 70 -2.2 -4.7254 | ACTGTTTACCAAAAA CACA GGTC CGTG CGAAGTCGTAAGACG PPA2401 612054 - 611557 - | hypothetical protein PPA2402 612201 - 612064 - | hypothetical protein PPA0553 612190 - 612621 + | GtrA family membrane protein PPA0554 612696 - 614684 + | OPT family oligopeptide transporter PPA0555 615590 - 614727 - | aldo/keto reductase PPA0556 616338 - 615706 - | peptide methionine sulfoxide reductase TERM 278 616202 - 616190 - G 74 -5.5 -4.56597 | overlap 616168 616193 TCGGCTCCCCAAAAA CAGCC CAT GGCTA GGTAGATCGTCTCTG TERM 279 616311 - 616328 + g 72 -2 -4.76075 | gap 1, overlap 616313 616315 616316 CTGGTAGTGCGTTCT CCGATGA GACCA TC-TCGG TTTTATTCATGTGCT TERM 280 617007 - 617026 + G 81 -4.2 -4.98255 | GTCTGGAGTGTTCTG GCCATTGT TGTT GCTATGGC TTTTTGTGCTTGCCA PPA0557 616495 - 618114 + | sodium-and chloride-dependent transporter PPA0558 618959 - 618243 - | uracil-DNA glycosylase TERM 281 618721 - 618694 - G 71 -7.6 -4.00407 | ACTGAAAAACTCAAA CCCACCGGATGC CCGG GCGTCGGGTAGG GGTCCTGACCGACGA PPA0559 619028 - 620254 + | membrane spanning protein PPA0560 620292 - 621275 + | hypothetical protein TERM 282 621288 - 621344 + T 75 -12.1 -3.21593 | opp_overlap 621296, overlap 621288 621289 TGAGGTAGCGATATC AGGCAGAACACGATGAGGGCAGGGTGC ATG GCGCCCTGCCCTCATAGCGATTAGCGA TGTTGTACGACAATG TERM 283 621289 - 621343 + T 81 -15.6 -2.52742 | opp_overlap 621296, overlap 621288 621288 GAGGTAGCGATATCA GGCAGAACACGATGAGGGCAGGGTGC ATG GCGCCCTGCCCTCATAGCGATTAGCG ATGTTGTACGACAAT TERM 284 621336 - 621296 - T 100 -21.9 -3.38768 | opp_overlap 621289 621288 621288 CGATATCAGGCAGAA CACGATGAGGGCAGGGTGC ATG GCGCCCTGCCCTCATAGCG ATTAGCGATGTTGTA PPA0561 621886 - 621380 - | transcription elongation factor GreA PPA0562 622333 - 621908 - | hypothetical protein TERM 285 624127 - 624139 + G 76 -5.5 -4.63218 | TTGCTCGATTCAGCG CTGTC GAT GGCAG TTTTCTTGACGCCGA PPA0563 622629 - 624644 + | hypothetical protein TERM 286 624664 - 624624 - T 75 -9.9 -3.9392 | gap 4 CTGGACCTCAAAGAA CCGCT-CTGGCGGCGA-G-CC TGA GGTCGTCGCC-CCAGCAGCGG ATTAGCGACCATAGC PPA0564 625487 - 624666 - | undecaprenyl pyrophosphate synthase TERM 287 625603 - 625588 - H 76 -4.7 -4.85782 | opp_overlap 625588 GGCTGGAAAAAGAAA CCTAC CGAACC GTAGG TTTGCAGTAGGTGAG TERM 288 626251 - 626277 + G 72 -10.9 -3.37959 | gap 1 TTTTCCACAGTTGCA CGGCGGTGGCAG CGAT CTGTCAC-GCCG TTGCTATTGGGCTTG PPA0565 625632 - 626303 + | putative hemolysin PPA0566 626450 - 627799 + | ATP-binding protein PPA0567 627819 - 628382 + | hypothetical protein PPA0568 628656 - 628420 - | exodeoxyribonuclease VII small subunit xseA 629900 - 628653 - | exodeoxyribonuclease VII large subunit PPA0570 631507 - 629981 - | putative phosphoesterase PPA0571 632787 - 631516 - | WD40 domain-containing protein ispH 632907 - 633878 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PPA0573 635102 - 633882 - | DNA recombination protein RmuC-like protein PPA0574 635181 - 636467 + | putative aminopeptidase 2 PPA0575 636616 - 637689 + | translation-associated GTPase PPA0576 637820 - 638557 + | hypothetical protein PPA0577 639102 - 638635 - | hypothetical protein PPA0578 640391 - 639165 - | transporter, putative fucose permease TERM 289 639626 - 639601 - G 74 -12.5 -3.14693 | overlap 639599 639597 CCCAGGACGAAGAGA GACGCGAACGC TGCG GCGGTCGCGCC GTCCGTCCCTCGCAC TERM 290 640130 - 640092 - G 74 -5.3 -4.49389 | gap 2, overlap 640100 AGTCGAGAAGGAAAA GCCGAACAGTGCCGCGGCT GTC AGC-GCGACACT-TGCCGC AGTCACTCGTCCTGG PPA0579 641075 - 640458 - | MarR family transcriptional regulator PPA0580 641010 - 641438 + | stress-induced protein PPA0581 641558 - 642247 + | NonF-related protein PPA0582 643038 - 644519 + | arginine/ornithine antiporter PPA0583 644650 - 645894 + | arginine deiminase PPA0584 645968 - 646972 + | ornithine carbamoyltransferase, catabolic PPA0585 646993 - 647898 + | carbamate kinase PPA0586 648015 - 648578 + | arginine repressor TERM 291 648819 - 648840 + G 71 -5.7 -4.33819 | GGTGGATGCTTGCGA GGCGGCAGC GCGA GCCGTCGTC TTTCTTCTCGATGAT PPA0587 648760 - 649422 + | hypothetical protein PPA0588 649446 - 649964 + | hypothetical protein PPA0589 649990 - 650958 + | oxidoreductase, putative aldo/keto reductase PPA0590 651011 - 651514 + | thiol peroxidase TERM 292 651528 - 651564 + F 85 -10.8 -4.38154 | opp_overlap 651549 651550, overlap 651531 GATTCACGTCGGTTT TGAGGGGCGTTTCGGC GTAAA GTCGGGGCGCCCCTGA TTTTGTGCCGCGTAT TERM 293 651531 - 651561 + F 79 -12.5 -3.1733 | opp_overlap 651549 651550, overlap 651528 TCACGTCGGTTTTGA GGGGCGTTTCGGC GTAAA GTCGGGGCGCCCC TGATTTTGTGCCGCG PPA0591 651675 - 653099 + | lysine-specific permease TERM 294 653304 - 653323 + G 71 -7 -4.26903 | overlap 653306 CACTGGGCTGTTCAA GTCTGGCC TTAG GGCCGGTC TTTTCCTCGGCTAGC PPA0592 653144 - 654379 + | alpha-amylase 3 PPA0593 655570 - 654404 - | UDP-glucose 6-dehydrogenase TERM 295 655698 - 655655 - R 84 -15.3 -3.01712 | overlap 655697 CGGCCTCCGGCAACA CCTCGTTGCAGGGCTCGCC GTCCAG GGTGAGCCCTGCAACGATC ACTATCGCGACCGCC PPA0594 656651 - 655713 - | putative lysophospholipase PPA0595 657197 - 659107 + | methylmalonyl-CoA mutase small subunit PPA0596 659104 - 661293 + | methylmalonyl-CoA mutase PPA0597 661447 - 662493 + | arginine/ornithine transport system ATPase PPA0598 662715 - 664187 + | serine protease PPA0599 664497 - 664267 - | hypothetical protein PPA0600 665328 - 664528 - | ABC-transporter, ATPase component PPA0601 665873 - 665325 - | ABC-type transporter, permease component PPA0602 666251 - 665919 - | hypothetical protein PPA0603 667298 - 666300 - | putative transcriptional regulator TERM 296 668146 - 668131 - g 70 -3.2 -4.63486 | opp_overlap 668137, overlap 668132 668134 ACTTCGTCAAGAAAA TCACCG CTGC CGGCAA GCAGGCGGTCTATGG PPA0604 667515 - 668735 + | putative sugar binding protein PPA2403 668823 - 669146 + | hypothetical protein PPA0605 669182 - 669667 + | putative sugar transport protein PPA0606 669695 - 670585 + | putative transport system permease protein PPA0607 670670 - 672040 + | glycosyl hydrolase, putative alpha-L-fucosidase PPA0608 672188 - 672763 + | L-fucose isomerase PPA0609 672646 - 673701 + | L-fucose isomerase PPA0610 673809 - 674105 + | class II aldolase and adducin N-terminal domain-containing protein PPA0611 674490 - 674068 - | hypothetical protein TERM 297 674114 - 674136 + g 70 -9.9 -3.4252 | gap 1, opp_overlap 674111 674096 GTTGTGATCAGACGC CGGTGTGCGG CGGA CCGCA-ACCG TTGTCGTCGATCGAG PPA0612 674491 - 675255 + | ABC transporter, ATP-binding protein PPA0613 675252 - 677426 + | putative permease PPA0614 677448 - 677726 + | hypothetical protein PPA0615 678638 - 677784 - | ABC-type transporter, permease components PPA0616 679456 - 678653 - | ABC transporter, ATP-binding protein PPA0617 680415 - 679498 - | solute binding protein PPA0618 681085 - 680534 - | hydrolase, putative isochorismatase PPA0619 682545 - 681082 - | transport-protein, putative permease for cytosine/purines PPA0620 682635 - 686093 + | NAD-dependent aldehyde dehydrogenase PPA0621 687173 - 686124 - | zinc-binding dehydrogenase TERM 298 686996 - 687016 + g 87 -10.4 -4.36914 | gap 1, overlap 686996 CGTGACCGAGGGTGA CC-CCGGGG CGCA CCCCGGCGG TTTTCTCACCGGAAA TERM 299 687277 - 687261 - H 71 -7.3 -4.13014 | GTGACATGGGGAAAA CACCATC GAC GATGATG ACAGGAGACCCAGAT PPA0622 687293 - 689023 + | putative dihydroxyacetone (glycerone) kinase protein PPA0623 689517 - 689014 - | putative purine phosphoribosyltransferase PPA0624 690107 - 689607 - | N-acetyltransferase TERM 300 691680 - 691667 - g 74 -3.7 -4.83615 | overlap 691668 CACCCCGGAGAAAAA GCCGC GCCC GTGGC CGCAGACCTTCGGCA pntA 690354 - 692018 + | NAD(P) transhydrogenase subunit alpha PPA0626 692022 - 693443 + | NAD(P) transhydrogenase subunit beta TERM 301 693463 - 693497 + F 100 -20.1 -3.09635 | GCCGCAACCTGTTTT CGATGCCCGCGACTG ACTGA CGGTCGTGGGCATCG TTGCATGCTGGGGGT PPA0627 693589 - 693909 + | ferredoxin PPA0628 693906 - 695009 + | N-succinyldiaminopimelate aminotransferase PPA0629 695948 - 695010 - | putative lipoprotein PPA0630 696912 - 695950 - | transferase, putative tetrahydrodipicolinate N-succinyltransferase PPA0631 697303 - 697007 - | hypothetical protein PPA0632 697293 - 698423 + | glycine amidinotransferase TERM 302 699424 - 699405 - g 76 -10 -3.74238 | GGAAAGAACTTGAAA GCCGTGGA GCTC TCCACGAC CGCGTACTGGGAGTG PPA0633 698547 - 699608 + | putative permease TERM 303 700530 - 700572 + G 100 -9.9 -5.17576 | gap 1 CTCTCTGATCATGTA GGGCGAAAGCGCATGCTGGT TGTG GCCAGTGTGGGCT-TCGTCC TTTTTTCGGTTCCTC PPA0634 699624 - 700919 + | proline/betaine transporter PPA0635 701540 - 700932 - | putative regulator PPA0636 701664 - 702743 + | dipeptidase PPA0637 702788 - 703093 + | hypothetical protein PPA0638 703134 - 703301 + | hypothetical protein TERM 304 703350 - 703315 - T 100 -25.6 -3.25223 | GACGCAGATGACTAA CGATCGTGCCCGGCTC GAAG AAGCCGGGCACGATCG TACAAAGCGAACCGT PPA0639 704549 - 703365 - | putative glycosyl transferase TERM 305 704112 - 704148 + g 82 -8.8 -4.37092 | gap 2, opp_overlap 704114, overlap 704117 CCTCATGCCTTCAGA GACCGCGATTACGGCGTC TGC GGCGTCGTAG--GCGGTC TTTTCTGCCCAGGAT TERM 306 705260 - 705236 - g 79 -7.8 -4.57073 | gap 1 GAGTTCCTCGAAAAA CCGGCTGATCC GCCT GG-TCTGCCGG ACGCTTCGGACGAGT glgC 704693 - 705919 + | glucose-1-phosphate adenylyltransferase TERM 307 705941 - 705975 + T 100 -21.6 -4.68724 | opp_overlap 705945 GATCTTCAGGACGCA CGAATCGGCTCCCC ATTTTTC GGGGAGCCGATTCG TTTTGTCTTGCGTCA TERM 308 705971 - 705945 - T 89 -15.9 -3.19463 | opp_overlap 705941 TTCAGGACGCACGAA TCGGCTCCCCA TTTTT CGGGGAGCCGA TTCGTTTTGTCTTGC PPA0641 706655 - 706002 - | methyltransferase TERM 309 706857 - 706844 - g 76 -5.3 -4.71426 | overlap 706847 CGTTGAGGAACAAAA CAATG ACGG CATTG TCGTCAACGGCACGA TERM 310 706863 - 706847 - g 76 -6.5 -4.46587 | overlap 706844 TGAGGAACAAAACAA TGACGGC ATT GTCGTCA ACGGCACGACGGGGG PPA0642 706725 - 707606 + | dihydrodipicolinate synthase PPA0643 707657 - 708070 + | sec-independent translocase PPA0644 709797 - 708223 - | endoglycoceramidase PPA0645 711013 - 709853 - | ATP-binding protein PPA0646 711590 - 711075 - | hypothetical protein PPA0647 712848 - 711583 - | putative magnesium (Mg2+) transporter MgtE PPA0648 712954 - 713463 + | hypothetical protein TERM 311 714134 - 714148 + G 74 -11.4 -3.50393 | overlap 714138 GCAGGTGGCCGGTTG CGGGTC GCT GACCCG TTGTATGGGCTGGGC PPA0649 713577 - 714449 + | putative cytochrome oxidase assembly protein PPA0650 715976 - 714480 - | Xaa-Pro aminopeptidase I PPA2404 716602 - 716958 + | hypothetical protein TERM 312 717295 - 717268 - Tf 73 -3.4 -4.85599 | overlap 717270 717271 717275 GGTATGCGATAAAAA GAGCATAGACAT GCTG ATGCCCATGTCC ATAAGGAGTTGCGGC PPA0652 718599 - 718048 - | hypothetical protein PPA0651 717501 - 718238 + | hypothetical protein TERM 313 718863 - 718890 + FH 85 -11.3 -4.05245 | gap 1 CCAAACTTGCTCCGT GCCGAC-CCCGC CTTGT GTGGGAGTCGGC TTTCGTTGTGTGATG TERM 314 719048 - 719081 + FH 90 -11.5 -4.32579 | overlap 719051 CCTTTCAGTTATTGC TCTGGCCGTCCCCGC CGCT GCGGGGGCGGCCTTC TTTCTTCTGAGGTGT TERM 315 719051 - 719078 + FH 100 -22 -4.27512 | overlap 719048 TTCAGTTATTGCTCT GGCCGTCCCCGC CGCT GCGGGGGCGGCC TTCTTTCTTCTGAGG PPA0653 719343 - 719537 + | hypothetical protein TERM 316 719809 - 719784 - g 77 -11.2 -3.65902 | gap 1, opp_overlap 719793, overlap 719785 CTGAGGCCACCGAAA TGGCGGCACGC CAGTC GCGTGCCGC-A GCTCAACATCTGCGT PPA0655 719534 - 719905 + | hypothetical protein PPA0656 720198 - 721412 + | iron transport system substrate-binding protein TERM 317 721604 - 721638 + G 79 -9.3 -4.17556 | opp_overlap 721600 GTATGGCAAATGAGG GCCCCG-CGTGTCATCG GAT CGATGGC-CGTCGGTGC TTTGTTGGCGATGTG PPA0657 721409 - 722443 + | iron transport system, permease protein PPA0658 722464 - 723237 + | ABC transporter, nucleotide binding/ATPase protein PPA0659 723234 - 723854 + | putative NADH:ubiquinone oxidoreductase PPA0660 726386 - 724101 - | carbon starvation protein A TERM 318 724841 - 724812 - G 74 -12.1 -3.24925 | gap 1, overlap 724813 ATCGGAGAGCATGAA CCGGGCGACGC-GG GTG CCAGCGTCGACCGA GGTGAGGATGAACAG TERM 319 724840 - 724813 - G 72 -13.4 -2.54634 | gap 1, overlap 724812 TCGGAGAGCATGAAC CGGGCGACGC-GG GTG CCAGCGTCGACCG AGGTGAGGATGAACA PPA0661 727623 - 726769 - | methionine aminopeptidase TERM 320 727206 - 727219 + g 74 -3.7 -4.83615 | AGGTGTAGCAGTTGT CGCCG TGCA CGCCG TTTTTGTAAGCGGTG PPA0662 727865 - 727635 - | hypothetical protein PPA0663 728896 - 728027 - | hypothetical protein TERM 321 728191 - 728160 - GH 73 -11.6 -3.40878 | gap 1, overlap 728158 ACGACGTCAACAACA TCGCCGCGCA-CCTG AGG CAGGCTGGGCAGCGA GACGTAGACCTCACT PPA0664 728895 - 730301 + | glutamine synthetase PPA0665 731162 - 730320 - | hypothetical protein PPA0666 731253 - 734204 + | glutamate-ammonia-ligase adenyltransferase PPA0667 735520 - 734198 - | hypothetical protein PPA0668 736708 - 735527 - | NIF3 (NGG1p interacting factor 3) TERM 322 737176 - 737191 + G 82 -9 -4.36914 | TGGCGTAAGGAGGGG CGTTCG CTGT CGAACG TTTTATCCGGGGCGC PPA0669 736909 - 737958 + | hypothetical protein PPA0670 737973 - 738608 + | hypothetical protein PPA0671 740111 - 738690 - | glutamine synthetase PPA0672 740180 - 740647 + | hypothetical protein PPA0673 740653 - 741765 + | putative glycosyl transferase group 1 TERM 323 742171 - 742189 + G 81 -5.3 -4.80882 | gap 1, overlap 742150 742149 742174 GCGTCGTCGTCAATG CGA-TGGC TGGG GCCACTCG TTTTTCATATCGGGT PPA0674 741789 - 742397 + | DedA family protein PPA0675 743860 - 742472 - | PTS system, glucose-specific IIBC component PPA0676 744036 - 744761 + | GntR family transcriptional regulator PPA0677 744758 - 745006 + | PTS system, glucose-specific IIB component PPA0678 745136 - 745366 + | PTS system, glucose-specific IIAB fragment PPA0679 745366 - 745860 + | putative PTS system component IIA PPA0681 747545 - 746343 - | hypothetical protein PPA0680 745628 - 746395 + | hypothetical protein PPA0682 749314 - 747509 - | ABC transporter, ATP-binding protein PPA0683 750092 - 749322 - | hypothetical protein PPA0684 751985 - 750294 - | sialidase B PPA0685 754375 - 752060 - | sialidase A precursor PPA0686 755980 - 754448 - | putative sialic acid transporter PPA2405 756191 - 756592 + | hypothetical protein TERM 324 756616 - 756659 + T 100 -32.7 -3.29739 | TTCTTCTGCACAGCG CACTCGGTGCCTTGCCCGC ACGCAG GCGGGCAAGGCACCGAGTG TTGATGTCAATTAGC PPA0687 757492 - 756689 - | cAMP factor PPA0688 758662 - 758471 - | hypothetical protein PPA0689 759848 - 758856 - | lipoyl synthase PPA0690 762102 - 759859 - | cation-transporting P-type ATPase A TERM 325 761610 - 761592 - G 71 -7.4 -4.21827 | overlap 761582 761593 CGAAAGAGGTTAAAA CCCCTAGT GAA ACTAGGGT ATCCATGGAGGTTAT PPA0691 764036 - 762099 - | putative permease TERM 326 762287 - 762318 + g 79 -13 -3.45023 | gap 1, overlap 762269 GCGCCATCGGGATCT CGCCGGTGGCCCAGG TGA TCTG-GCCACCGACG TTCTGGTCGTCATGC lipB 764910 - 764092 - | lipoyltransferase TERM 327 765031 - 764996 - R 87 -13.2 -3.85817 | opp_overlap 764986 765024, overlap 764997 AGGGGCGGGCATAAA TGGCGAGGCGGTGGGA TCGA TCCCACCGCCTCGGGC TTGCCCTGGGTATTC TERM 328 765030 - 764997 - R 88 -16.7 -2.91276 | opp_overlap 764986 765024, overlap 764996 GGGGCGGGCATAAAT GGCGAGGCGGTGGGA TCGA TCCCACCGCCTCGGG CTTGCCCTGGGTATT PPA0693 766457 - 765084 - | dihydrolipoamide acyltransferase TERM 329 765981 - 765996 + g 71 -9 -3.78934 | opp_overlap 765955 ACCAGTTCCGGTGAT CGTCGA CAGG TCGACG TTGTTCTCCCGGGCG TERM 330 766511 - 766536 + rH 70 -2.5 -4.74103 | CAAGCCTAGCTTGAC TGTGGCCAAAT GTGC AGTTGGTCCCA TTTTTGGATTCAGAA PPA0694 768192 - 766618 - | putative aminopeptidase TERM 331 766799 - 766778 - GH 74 -6.5 -4.39002 | gap 1, overlap 766766 766780 AAACGTTGCAGAAAA GCTGCAGCGA GCA TCGC-GCCGC CTTCGCGAGCGCCGG PPA0695 768179 - 768658 + | hypothetical protein PPA0696 768846 - 768628 - | hypothetical protein TERM 332 768772 - 768801 + g 77 -11.4 -3.58343 | CTCGAACTGTTGCCC GGCTCCGAGCTC ACCGAG GTGTTCGGAGCC TTTGACGGTGATGCG PPA0697 769645 - 768890 - | hypothetical protein TERM 333 769919 - 769897 - g 73 -9.8 -3.68222 | opp_overlap 769908 769910, overlap 769909 769910 CTCTAAGGCGAACAA GGCCCTCGAC AAG GTCGAGGATC CGCGCGAGACCCTCG PPA0698 769844 - 770647 + | phage shock protein A PPA0699 770644 - 770934 + | hypothetical protein PPA0700 771105 - 771458 + | HesB protein, putative for nitrogen fixation TERM 334 771509 - 771550 + F 100 -20.3 -4.32048 | opp_overlap 771512 GCTCGTTGGAGTCAT TAAGGCGTTTCGTCAGTCC TACT GGGCGGACGAAGCGCCTTA TTTTCGCTATTGTTC TERM 335 771547 - 771512 - f 79 -13.2 -3.18264 | opp_overlap 771509 CGTTGGAGTCATTAA GGCGTTTCGTCAGTCC TACT GGGCGGACGAAGCGCC TTATTTTCGCTATTG PPA0701 771639 - 772547 + | cytochrome c oxidase subunit II PPA0702 772544 - 774262 + | cytochrome c oxidase polypeptide I PPA0703 774262 - 774657 + | hypothetical protein TERM 336 774658 - 774702 + T 83 -13.5 -3.61178 | gap 1, opp_overlap 774683, overlap 774659 GATTACGCTCACTGA C-CGTCCATCGCCGCCACGG ATCAGA CCGCGGCGGCGATGTCCGTG TTTGGGCTAGATCAG TERM 337 774659 - 774700 + T 90 -17.2 -3.38522 | opp_overlap 774683, overlap 774658 ATTACGCTCACTGAC CGTCCATCGCCGCCACGG ATCAGA CCGCGGCGGCGATGTCCG TGTTTGGGCTAGATC PPA0704 777147 - 774709 - | hypothetical protein PPA0705 777701 - 777144 - | putative ABC transporter ATP-binding protein TERM 338 777844 - 777885 + H 100 -22.3 -3.36273 | gap 1, overlap 777846 777884 CCTTTGTGTGATGAG GCGGGACGGCGCGCGT-GCT GGT AGCTACGCGCGCCGCCCCTC TTGCTATTAGCAGGA TERM 339 777846 - 777883 + H 100 -23.5 -3.25073 | gap 1, overlap 777844 TTTGTGTGATGAGGC GGGACGGCGCGCGT-GCT GGT AGCTACGCGCGCCGCCCC TCTTGCTATTAGCAG TERM 340 778053 - 778063 + H 70 -2.6 -4.77036 | opp_overlap 778048 778053, overlap 778049 TTTCATATGACGACA TAAT GTC ATTA TTTTTGCTACTGACA PPA0706 778612 - 778830 + | hypothetical protein TERM 341 778889 - 778831 - T 76 -13.2 -3.06312 | gap 1, opp_overlap 778834 AAATCGTGCAGTTAA GGACGTGCAATCCCTTTCGTGTCTGGC CTGAAC GTC-GACACGGTAAGGGTTGCACGTCC GTTGAGAACCTAGGA PPA0707 779787 - 779173 - | putative nucleoside-diphosphate-sugar epimerase PPA0708 781354 - 779894 - | inositol-5-monophosphate dehydrogenase PPA0709 781414 - 781731 + | putative methyltransferase TERM 342 781762 - 781732 - T 81 -15.4 -2.62184 | CGTGGCCGGATATGA CGCAGGCCCCCTCA TAG CGAGAGGGCCTCCG CGCTAGGTAGAGCGG PPA0710 783459 - 781780 - | cytochrome b subunit TERM 343 782639 - 782621 - G 75 -2.3 -4.92756 | gap 1, overlap 782622 ACCACGAAAAAGAAA CCGCCGGC CTTG GCCG-CGT ATACCGGAAACAGCG PPA0711 784511 - 783459 - | ubiquinol-cytochrome c reductase iron-sulfur subunit TERM 344 783845 - 783861 + g 72 -10.9 -3.31144 | GCTGGAACTCAACTC CCTCAAG CTC CTTGAGG TTCTCGGGCTCAGCG PPA0712 785311 - 784508 - | cytochrome c heme-binding subunit TERM 345 784809 - 784791 - G 76 -12.4 -3.30243 | opp_overlap 784797 784798 784801 AGGGAGGGGGCATAA GCACCCTC GGG GAGGGCGC CACCGCGACCCTCGA PPA0713 785924 - 785343 - | cytochrome c oxidase subunit III PPA0714 786247 - 786714 + | putative response regulator PPA0715 787708 - 786998 - | hypothetical protein PPA0716 788263 - 787718 - | hypothetical protein TERM 346 787775 - 787753 - G 78 -16.2 -2.63596 | opp_overlap 787756 CGGCAGTGGAGAGCA GGCCGCGAGC TTC GCACGCGGCC CGACTGCGTAGTCGC TERM 347 788171 - 788141 - G 77 -3.1 -4.88067 | opp_overlap 788146, overlap 788143 ATGGAGCGAGAAAAA GCGGGCGTCGACC CATGC AGTCGACGTCTTC GAGGACTCGAGATCC TERM 348 788477 - 788430 - R 100 -15.7 -4.25104 | gap 2, overlap 788432 788433 GCGCTGGCACGAAAA TATGCGACGACGGGGCTCGCCAC CATG GTGGCGAGCCCCGTCGA-G-ATG GCGGGAATGGCTCTC TERM 349 788475 - 788432 - R 100 -18.3 -3.73042 | gap 2, overlap 788430 788433 GCTGGCACGAAAATA TGCGACGACGGGGCTCGCCAC CATG GTGGCGAGCCCCGTCGA-G-A TGGCGGGAATGGCTC TERM 350 788475 - 788433 - R 100 -19.9 -2.83504 | gap 1, overlap 788432 788430 CTGGCACGAAAATAT GCGACGACGGGGCTCGCCAC CATG GTGGCGAGCCCCGTCGA-GA TGGCGGGAATGGCTC PPA0717 789606 - 788491 - | putative regulatory protein PPA0718 789789 - 790301 + | peptidyl-prolyl cis-trans isomerase A PPA0720 792884 - 790983 - | hypothetical protein PPA0719 790419 - 791063 + | hypothetical protein TERM 351 792218 - 792265 + gF 84 -15.7 -2.63596 | opp_overlap 792215 GTCCGTGAAGGACGT CGACGGTGGCCCTCGCATCG-GC AAGG GCGCGGTGTGAGGGC-GTCGTCG TGGTGTGGAATAGCC PPA0721 793035 - 794192 + | NPL/P60 family secreted protein PPA0722 794199 - 795269 + | glucokinase PPA0723 795681 - 795274 - | hypothetical protein PPA0724 795741 - 796496 + | putative acyltransferase PPA0725 796663 - 797220 + | putative acyltransferase TERM 352 797322 - 797291 - f 70 -12.3 -2.83788 | opp_overlap 797295, overlap 797290 ACGGAACTGAAGAAG GTCATGGCGGGAA GTAGAA TCCCCGCCATGTC TCAGAGCGTTCCCAG PPA0726 797294 - 798712 + | phospho-2-dehydro-3-deoxyheptonate aldolase PPA0727 798816 - 799463 + | putative Zn-dependent hydrolase PPA0728 800435 - 799479 - | membrane spanning protein DUF6 PPA0729 801897 - 800485 - | serine-threonine protein kinase PPA0730 802024 - 802467 + | guanyl-specific ribonuclease Sa3 precursor PPA0731 802464 - 802862 + | hypothetical protein PPA0732 803984 - 802887 - | geranylgeranyl pyrophosphate synthase PPA0733 806845 - 804584 - | putative helicase protein TERM 353 804652 - 804673 + g 71 -8 -4.08144 | CTCGAACGGGCTGGT TCGCCTCG GAACGA TGAGGCGA TTTCTGCTTCCTGAG PPA0734 808151 - 806892 - | putative carotenoid dehydrogenase PPA0735 808110 - 808577 + | putative hydrolase PPA0737 808957 - 809415 + | 18 kDa antigen 2 PPA0738 810858 - 809488 - | gluconate permease PPA0739 811413 - 810934 - | gluconokinase PPA0740 811583 - 812290 + | GntR family transcriptional regulator PPA0741 812358 - 813188 + | putative GntR-famly transcriptional regulator TERM 354 813241 - 813190 - T 81 -13.1 -3.59627 | overlap 813198 ACCAAACCGGGTAAA TACATCA-AGCTGGCCGGGTCCGAT CTGG ACCGGGCCCGGCCAGCTGTG-CGTC AGATCAGTCTTCGAA TERM 355 813233 - 813198 - T 100 -22.6 -3.42257 | overlap 813190 GGGTAAATACATCAA GCTGGCCGGGTCCGAT CTGG ACCGGGCCCGGCCAGC TGTGCGTCAGATCAG PPA0742 816229 - 813245 - | glycine dehydrogenase TERM 356 813518 - 813538 + g 77 -11.1 -3.62597 | GTTAGCCGGCCAGTG GCCCGACTG CAC CATTCGGGC TTCTTCGACGATCGC TERM 357 816208 - 816183 - G 78 -10.3 -3.85698 | opp_overlap 816182 816183, overlap 816184 TGGCGGCTCGAGAAA GGGCGCGGCCC TTCG AGGCCGCACCG ATTCTCAGCGTGGTC TERM 358 816207 - 816184 - G 75 -13.8 -2.91276 | opp_overlap 816183 816182, overlap 816183 GGCGGCTCGAGAAAG GGCGCGGCCC TTCG AGGCCGCACC GATTCTCAGCGTGGT PPA0743 816606 - 816235 - | glycine cleavage system protein H TERM 359 816520 - 816462 - G 100 -20.8 -3.86897 | overlap 816465 CGGATCCGGCAGAAA CATCGCTGCCGACCTGGGGGACGTCGAC AAA GACGACGTCCCCCAGGGCCTCTGCGGCG TAGTCGGTGATTCCT TERM 360 816517 - 816465 - G 100 -23.3 -2.71125 | overlap 816462 ATCCGGCAGAAACAT CGCTGCCGACCTGGGGGACGTCGAC AAA GACGACGTCCCCCAGGGCCTCTGCG GCGTAGTCGGTGATT gcvT 817761 - 816646 - | glycine cleavage system aminomethyltransferase T PPA0745 818319 - 818098 - | hypothetical protein TERM 361 818336 - 818346 + r 75 -5.4 -4.56775 | overlap 818330 CCGTCGTCAGTCGCG GTGA CTT TCAC TTTTTGACAAGGGAT PPA0746 820556 - 818343 - | putative protease PPA0747 821695 - 820553 - | hypothetical protein PPA0748 822819 - 821776 - | magnesium chelatase, subunit ChlI PPA0749 823041 - 823523 + | hypothetical protein PPA0750 823666 - 824679 + | S-adenosyl-methyltransferase MraW PPA0751 824676 - 825140 + | hypothetical protein PPA0752 825137 - 827062 + | cell division protein FtsI/penicillin-binding protein 2 PPA0753 827149 - 828648 + | UDP-N-acetylmuramyl tripeptide synthase PPA0754 828645 - 830102 + | UDP-N-acetylmuramyl pentapeptide synthase mraY 830099 - 831169 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 831166 - 832647 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PPA0757 832607 - 833929 + | cell division protein FtsW murG 833972 - 835090 + | N-acetylglucosaminyl transferase PPA0759 835102 - 836517 + | UDP-N-acetylmuramate--alanine ligase PPA0760 836517 - 837230 + | cell division protein FtsQ PPA0761 837353 - 838606 + | cell division protein FtsZ TERM 362 838623 - 838658 + G 76 -13.2 -3.11192 | opp_overlap 838643 GTGCTGAGATTCGTT ATCGACCCCGGTGCCA ATCA TGGCGTCGGGGTCGCC TTCACTGATCGTGTC PPA0762 838608 - 839393 + | hypothetical protein PPA0763 839520 - 840038 + | hypothetical protein PPA0764 840049 - 840339 + | hypothetical protein TERM 363 841433 - 841461 + G 70 -4.4 -4.56597 | overlap 841434 CACTTCCCACCTGCG TGCCCAGGCCGA CAACC TTGACCAGGGCG TTTTTGAGCCCGCAG PPA0765 840492 - 841577 + | putative immunogenic protein antigen 84 TERM 364 841598 - 841633 + F 100 -16.2 -3.84674 | opp_overlap 841598 841597 GCACACGTCGTAAAG CTCCGTGCTCTCGGTC GAAG GATCGGGGGCATGGAG TTGTTGTCATACAGT PPA0766 841780 - 842220 + | putative DNA-binding protein PPA0767 842184 - 842732 + | lipoprotein signal peptidase PPA0768 842774 - 843694 + | pseudouridylate synthase PPA0769 843812 - 845245 + | pyruvate kinase TERM 365 845265 - 845301 + F 100 -18.1 -3.72576 | overlap 845269 GGGTATGCCTCGATC GTTACGACGTCCCTCAT TCC GTGAGGGACGTCGTCGC TTTCCTGGACGGCCC TERM 366 845269 - 845297 + F 95 -19.7 -2.67803 | overlap 845265 ATGCCTCGATCGTTA CGACGTCCCTCAT TCC GTGAGGGACGTCG TCGCTTTCCTGGACG PPA0770 845527 - 845958 + | CrcB-like protein PPA0771 845955 - 846326 + | CrcB-like protein PPA0772 846596 - 847228 + | putative two-component system response regulator PPA0773 847661 - 847248 - | ComAB protein TERM 367 847291 - 847321 + gF 100 -15.5 -3.86995 | opp_overlap 847284 847286 847279 ATAGCACAGATGCGG CCCTCATCGTCGA CGATT TCGACGATGTGGG TTGTTGTGCGTTTAC TERM 368 847784 - 847794 + Gr 73 -4.6 -4.58395 | overlap 847765 GACGGGCATTCGATG GCCT TCC GGGC TTTTTACGCCCTGCC PPA0774 847616 - 850411 + | DNA polymerase I PPA0775 853003 - 850574 - | oxidoreductase, putative D-lactate dehydrogenase PPA0776 853416 - 852949 - | putative oxidoreductase PPA0777 854272 - 853496 - | hypothetical protein TERM 369 853982 - 853996 + g 77 -3.4 -5.00616 | overlap 853979 GGTTTTCATGCAGCC GGCTGG AAC CGGGCC TTTTTTCGCGGCCGA rpsA 854597 - 856093 + | 30S ribosomal protein S1 TERM 370 856150 - 856112 - f 100 -18.8 -3.53224 | opp_overlap 856115, overlap 856113 TACTTTTCGTCGAAA CTTCGAGGGGCTCCGCCA TAA TGGCGGAGCCCCTCGTTT GTGTTTCTTGGGCTG TERM 371 856149 - 856113 - f 100 -22.3 -2.71791 | opp_overlap 856115, overlap 856112 ACTTTTCGTCGAAAC TTCGAGGGGCTCCGCCA TAA TGGCGGAGCCCCTCGTT TGTGTTTCTTGGGCT TERM 372 856115 - 856147 + F 100 -29.3 -4.46072 | opp_overlap 856113 856112 TTTTCGTCGAAACTT CGAGGGGCTCCGCCA TAA TGGCGGAGCCCCTCG TTTGTGTTTCTTGGG PPA0779 856313 - 857716 + | putative for Fe-transport TERM 373 857797 - 857755 - gf 76 -9.1 -4.0641 | gap 1, opp_overlap 857761, overlap 857756 TCGCACGCAGACAAA GTGCCGGCAGGGATGGGGGC ACTC GTCCCCATCCCTG-CTACAT TCCCGAAAACGAGTT TERM 374 857796 - 857756 - gf 76 -12.6 -3.03525 | gap 1, opp_overlap 857761, overlap 857755 CGCACGCAGACAAAG TGCCGGCAGGGATGGGGGC ACTC GTCCCCATCCCTG-CTACA TTCCCGAAAACGAGT TERM 375 857761 - 857792 + GF 100 -22.4 -2.52464 | opp_overlap 857756 857755 GCAGACAAAGTGCCG GCAGGGATGGGGGC ACTC GTCCCCATCCCTGC TACATTCCCGAAAAC PPA0780 857622 - 858941 + | hemin receptor precursor TERM 376 859305 - 859320 + G 84 -3.2 -5.25803 | overlap 859287 GGGCATCGATCATGA TTGTGG TCGC CCCCAA TTTTTTGTCCGGGTT TERM 377 859341 - 859354 + G 71 -8.1 -4.0371 | TGTCCGGGTTCGGGG TGCCG GCAG CGGCA TTTGTGTCCGGACTG PPA0781 858938 - 859996 + | ABC-type transporter, permease component TERM 378 860426 - 860455 + G 100 -15.1 -4.45544 | gap 1, overlap 860411 860427 CCCGGGTGACGTTGG C-CAGGGTGCTTGC CCA GCAGGCACCCTGTG TTTTCCTTGATGAGC TERM 379 860427 - 860453 + G 100 -18.8 -3.83437 | overlap 860411 860426 CCGGGTGACGTTGGC CAGGGTGCTTGC CCA GCAGGCACCCTG TGTTTTCCTTGATGA TERM 380 860643 - 860624 - g 76 -5.6 -4.72272 | overlap 860626 TGTCCGGAGGAAAAA TACTGGCC GTGG GGCCAGCT GTGGAGGTGCTCACC TERM 381 860641 - 860626 - g 78 -10.4 -3.98256 | overlap 860624 TCCGGAGGAAAAATA CTGGCC GTGG GGCCAG CTGTGGAGGTGCTCA PPA0782 859996 - 860775 + | ABC-type transporter, ATPase component PPA0783 860799 - 862508 + | ABC transporter ATP-binding protein TERM 382 863496 - 863529 + G 84 -3.7 -5.22006 | overlap 863497 AGGAATTGTGTTTGG ATCATGCTCCGGCGC TGGA GTGGCGGGGTGTGAG TTTTTGTTATCGTGA PPA0784 862505 - 864175 + | ABC-type transport system, fused ATPase and permease PPA0785 864204 - 864899 + | dephospho-CoA kinase PPA0786 865732 - 866931 + | hypothetical protein TERM 383 866969 - 866996 + T 100 -17.8 -4.47456 | TGCTGACGACGGTGA TAGGTGGGGGTC ATTT GGCCCCCACCTA TTTGTTGTTGCGTAT PPA0787 868213 - 867392 - | magnesium-chelatase subunit ChlI PPA0788 870176 - 868374 - | magnesium-chelatase subunit TERM 384 868984 - 868953 - G 74 -12.4 -3.21099 | gap 1, opp_overlap 868951, overlap 868955 868958 TGCGTCGACGATGAA TACGACGAGAGTCGA CGT CCGACTCTCG-CGCA CCTTGCGTCTCCAGT TERM 385 868982 - 868955 - G 74 -12.8 -3.17051 | gap 1, opp_overlap 868951, overlap 868953 868958 CGTCGACGATGAATA CGACGAGAGTCGA CGT CCGACTCTCG-CG CACCTTGCGTCTCCA TERM 386 868980 - 868958 - G 73 -14.2 -2.78495 | opp_overlap 868951, overlap 868955 868953 CGACGATGAATACGA CGAGAGTCGA CGT CCGACTCTCG CGCACCTTGCGTCTC PPA0789 870708 - 870292 - | hypothetical protein PPA0790 872156 - 870744 - | CobN/magnesium chelatase, putative subunit H TERM 387 871385 - 871409 + gr 72 -11.5 -3.30124 | overlap 871392 CAGCTGTGAAGGCCG TGGCAAGGTCT TCG GGACTTTGCCA TTGTCCAGAATCGAC PPA0791 874576 - 872003 - | CobN/magnesium chelatase subunit TERM 388 872129 - 872142 + g 81 -5.9 -4.74103 | overlap 872123 CTCCCTGAGTGAGCG CCTCG TCTT CGGGG TTTTTGGGTTCCACA TERM 389 874120 - 874131 + gr 85 -3 -5.42862 | ACCCCATTTCTGTGA TGAT AGGA ATCA TTTTTTTGGCACTAT TERM 390 874221 - 874239 + gr 85 -3 -5.37043 | overlap 874222 GGCGGCATGTGTTTC ATGTCAGC GTG GCTGCCAG TTTTTTCTATGGCAT PPA0792 875370 - 874573 - | iron(III) dicitrate transport system permease protein FecE PPA0793 876196 - 875384 - | iron(III) dicitrate transport system permease protein TERM 391 875426 - 875414 - G 74 -3.3 -4.73614 | GAGGAGGAAAAGAAA GAAGG GAA CCCCC AGTGCTGTGAGCATG PPA0794 877203 - 876424 - | periplasmic binding protein PPA2406 877356 - 877595 + | hypothetical protein PPA0795 877803 - 878078 + | hypothetical protein PPA0796 878439 - 878164 - | ABC transporter ATP-binding protein PPA0797 878811 - 878530 - | ABC transporter ATP-binding protein PPA0798 879361 - 878852 - | putative permease PPA0799 879864 - 879385 - | hypothetical protein PPA0800 880663 - 879902 - | hypothetical protein TERM 392 880180 - 880168 - G 76 -9.1 -4.10453 | TAAACCGTTGTAAAA GCCGA GGA TCGGC ACACTGATCAAAGCC TERM 393 880922 - 880952 + r 100 -19 -2.81471 | overlap 880914 CGTGGAGGGGTATCA GGCGGCACGTCCCA CCG TAGGGCGTGCCGCC TGTGATAGGGTTGTC PPA0802 881247 - 880966 - | hypothetical protein TERM 394 882984 - 883023 + G 91 -8.6 -4.78149 | gap 1, opp_overlap 883018, overlap 882975 882986 ACTCGACCTCCCGGA GGTTTCCTTGGTGGCGATC CTC GA-CGCCGACAAGGAAGGC TTTTTGCGTTCTGAA PPA0803 881422 - 883527 + | excinuclease ABC subunit B TERM 395 883945 - 883966 + G 71 -7.3 -4.24745 | opp_overlap 883947, overlap 883954 GTGGTTGACCGAGTA CAGCTTGTC GATC GACAACCTG TTTATCTTCCTCATC TERM 396 884047 - 884066 + G 84 -3.5 -5.16841 | gap 1, overlap 884050 GGTAGGTATCATCGT CGCCCTCG TTTTC CG-GGGTG TTTTTATTGCTCTGG TERM 397 884324 - 884350 + G 73 -10.8 -3.67622 | overlap 884319 ACCTCGATGTTCATG GTTTGTGTCGCC CTG GGCGCCACGGAC TTGCTTTTCGCCCTC PPA0804 883718 - 884707 + | TerC family membrane protein PPA0805 885372 - 884716 - | Zn-dependent hydrolase PPA0806 886161 - 885418 - | mycothiol-dependent maleylpyruvate isomerase TERM 398 889230 - 889217 - g 70 -3.7 -4.67038 | CCGGGAAAAGGAAAA CCACC GCCA GGAGG AAGGCAAAAAAGACC uvrA 886303 - 889272 + | excinuclease ABC subunit A PPA0808 889694 - 889287 - | Rieske iron-sulfur protein PPA0809 890456 - 889710 - | putative phosphoglycerate mutase/fructose-2,6-bisphosphatase TERM 399 891763 - 891777 + G 70 -3.4 -4.71828 | opp_overlap 891747, overlap 891747 891746 GCTACTCGATCGTGA GCGTTC GGT GGCCGC TTTTCTTAATGGGCT PPA0810 890633 - 891796 + | hypothetical protein PPA0811 891905 - 892282 + | hypothetical protein uvrC 892433 - 894493 + | excinuclease ABC subunit C PPA0813 894512 - 895387 + | hypothetical protein PPA0814 895384 - 896352 + | hypothetical protein PPA0815 896409 - 897398 + | hypothetical protein PPA0816 897632 - 898639 + | glyceraldehyde-3-phosphate dehydrogenase TERM 400 898659 - 898694 + F 100 -28.4 -2.87132 | ACCATCGTGAGCTGA TGACGGCCCCGTGCCC ATGC GGGCGCGGGGCCGTCA TCTATACCCGGGCCG pgk 898762 - 899970 + | phosphoglycerate kinase tpiA 899970 - 900749 + | triosephosphate isomerase TERM 401 900753 - 900808 + F 84 -15.2 -3.00525 | TACGAGGCCTGATCA GGCAGTTCCGAGACGGTCCCCGCACC TGAT GGTGCGGGGACCGTTCCCGTTCAACC TCTGATTTACGAGCG secG 900850 - 901149 + | preprotein translocase subunit SecG TERM 402 901223 - 901238 + F 77 -10.4 -3.86897 | opp_overlap 901223 901222 901221 CAACCCCTAAAAAGT GCTGCC CTCA GGCAGC TTTGTGACCCCTCGA PPA0820 901267 - 901623 + | electron transport protein PPA0821 901620 - 903065 + | folylpolyglutamate synthase PPA0822 903062 - 903448 + | hypothetical protein PPA0823 903470 - 903898 + | nucleoside diphosphate kinase PPA0824 903944 - 905896 + | Fe-S oxidoreductase family protein 2 PPA0825 905899 - 906633 + | hypothetical protein TERM 403 908138 - 908099 - g 82 -12.7 -3.65046 | TGTCGAGGCTAAGAA GCAGCGTCGTCGGGAGG GACGTG CCGCCGGACGTCGCCGC AGTGCCGTCATCACC PPA0826 906906 - 909530 + | putative ribonuclease rplU 909691 - 909999 + | 50S ribosomal protein L21 rpmA 910011 - 910280 + | 50S ribosomal protein L27 TERM 404 910333 - 910296 - f 85 -15.5 -3.02471 | opp_overlap 910299 910301 TCCCCACGACATAGA TGTGATTGGCCCCCGCC ATGA GGCGGGGGCCAATCTGT GTCTGAGACACGTTG TERM 405 910299 - 910330 + F 100 -26 -2.98823 | opp_overlap 910296, overlap 910301 CCACGACATAGATGT GATTGGCCCCCGCC ATGA GGCGGGGGCCAATC TGTGTCTGAGACACG TERM 406 910301 - 910328 + F 100 -22.8 -3.05022 | opp_overlap 910296, overlap 910299 ACGACATAGATGTGA TTGGCCCCCGCC ATGA GGCGGGGGCCAA TCTGTGTCTGAGACA PPA0830 910531 - 911130 + | hypothetical protein TERM 407 911169 - 911221 + F 70 -12.2 -2.86338 | opp_overlap 911169 911167 911205, overlap 911168 911171 GAGGGAGTGACAATA TATGCACTGAGTGCACCTTATGTA CTTGA TGCAAAACCTGCACTCGGTGCATA ATTATTGCTGTGGCT PPA0831 911231 - 911839 + | TetR family transcriptional regulator PPA0832 911934 - 913697 + | major facilitator superfamily permease obgE 913800 - 915317 + | GTPase ObgE PPA0834 915250 - 916485 + | gamma-glutamyl kinase TERM 408 917576 - 917586 + GF 74 -3.2 -4.74103 | TCACTAAGTCGATGT CTTC GCA GGAG TTTTTCGCTTCAAGC PPA0835 916534 - 917781 + | gamma-glutamyl phosphate reductase TERM 409 918082 - 918098 + GF 100 -12.3 -4.4078 | GGTTGCGGCCAGATT CGACCTC GAC GAGGTCG TTTTCGTTCCCACCG TERM 410 918184 - 918201 + GF 70 -4.1 -4.70659 | CATGACCGTCATCGC GACGG CGTCGAAT CCGTC TTTTTCGGTGTCGCG nadD 917747 - 918619 + | nicotinic acid mononucleotide adenylyltransferase TERM 411 919012 - 918983 - g 70 -12.9 -2.9155 | overlap 918978 919011 TTCCTGAAGATGAGA TGTCTGTCCCCAC GGAC GTAGGGACAGACG CGCAGTGAGCGATCG PPA0837 918616 - 919020 + | hypothetical protein PPA0838 919101 - 919688 + | phosphoglycerate mutase/fructose-2,6-bisphosphatase TERM 412 919735 - 919751 + T 77 -10.1 -3.87869 | opp_overlap 919728 GGGAGATACTTGAGA CTCGCTC TAC GAGCGGG TTTCTGGGGCATTGG TERM 413 919841 - 919876 + T 100 -14.9 -5.08601 | gap 1 TCCACTCGTCGTGAG GACCGGCTGACT-GGT AAAAC ACCTAGTCAGCTGGTC TTTTTCTTACCCTCG PPA0839 921351 - 919867 - | putative N-acetylmuramoyl-L-alanine amidase TERM 414 920084 - 920051 - G 80 -11 -3.78775 | gap 1, overlap 920052 920079 920080 CTGGGCATGACGAAA GCGCCCCCTCCCGGC AGCCA GCCAAGAAGGGG-GC CACGCTCAGGCGACC PPA0840 921750 - 922058 + | hypothetical protein PPA0841 922028 - 922375 + | hypothetical protein PPA0842 922490 - 922726 + | hypothetical protein PPA0843 923599 - 923204 - | ABC transporter ATP-binding protein fragment PPA0844 924205 - 923606 - | ABC transporter ATP-binding protein fragment PPA0845 924593 - 924060 - | ABC transporter ATP-binding protein fragment TERM 415 924639 - 924660 + H 75 -4.3 -4.72007 | overlap 924640 GAGGTTGAGTATGGC GGCCTGTTC ACTT GATCAGGCA TTTCTTTTAGTGAGG PPA0846 924721 - 925026 + | conjugal transfer protein (TraA-like protein) fragment PPA0847 924900 - 925169 + | conjugal transfer protein (TraA-like protein) fragment PPA0848 925182 - 925556 + | conjugal transfer protein (TraA-like protein) fragment PPA0849 925604 - 927295 + | transfer protein homolog TraA PPA0850 927977 - 927480 - | putative DNA processing Smf-family protein TERM 416 927665 - 927648 - G 70 -4.7 -4.4768 | overlap 927621 927619 927650 CACGAACAGAATAAA CGGAGCG CGGT CGCCCAG ATCATCCAGCGCCTG PPA0851 928266 - 929873 + | hypothetical protein PPA0852 929874 - 931562 + | putative ATP-dependent DNA helicase PcrA TERM 417 932851 - 932867 + T 73 -2.9 -4.77896 | TAGAAAGCGGGTACT CTGTGCA CTT TGCAGGG TTTTTGCCTTCGTTG PPA0853 933183 - 932989 - | hypothetical protein PPA0854 933630 - 933340 - | hypothetical protein PPA0855 933712 - 933912 + | hypothetical protein PPA0856 934355 - 934056 - | hypothetical protein PPA2354 935053 - 935337 + | putative transposase PPA0858 935472 - 935996 + | putative transposase subunit PPA0859 936198 - 938810 + | putative lanthionine biosynthesis protein PPA0860 938791 - 939744 + | putative lanthionine biosynthesis protein PPA0861 939741 - 940823 + | hypothetical protein TERM 418 941094 - 941107 + G 78 -4.5 -4.7373 | ACTCCAGCGCAATGT GGGAC GCTC GTTCC TTTTTGCTGGAATCG PPA0862 940823 - 942142 + | hypothetical protein PPA0863 942173 - 942763 + | hypothetical protein TERM 419 943829 - 943817 - g 81 -7.7 -4.60041 | opp_overlap 943817 AGTCATGGGGAAAAA GGGAA AAA TTCCC TTTGCCTGACATTAA TERM 420 943955 - 943943 - g 70 -3.3 -4.63527 | GGACCACTTCAAAAA TAGCG AAG CGCTG GACGGCCTCTGGTGG PPA0864 942787 - 944355 + | hypothetical protein PPA0865 944352 - 945068 + | hypothetical protein PPA0866 945258 - 945503 + | hypothetical protein TERM 421 945699 - 945740 + T 100 -15.8 -4.57581 | gap 1, opp_overlap 945698, overlap 945702 TCCTCGTAACGAGAT GG-GCGGGCTGGCGGGTGC TTTTC GGGCCCGCCGGCCCGTTCC TTTGTTATTTACGGT TERM 422 945702 - 945736 + T 100 -18.5 -3.78475 | opp_overlap 945698, overlap 945699 TCGTAACGAGATGGG CGGGCTGGCGGGTGC TTTTC GGGCCCGCCGGCCCG TTCCTTTGTTATTTA PPA0867 946366 - 946094 - | hypothetical protein TERM 423 946398 - 946420 + r 75 -4 -4.81212 | overlap 946399 GCGATAATTTAGACC TCCTTTGTGC TTG GCTCAAGGGC TTTTGTTCTAGTGGA TERM 424 946581 - 946598 + r 78 -4.1 -4.98436 | AAATTCTTGGCGGAT GGCTATG TGGA TATGGCC TTTTTCTGGTCTTGA PPA2400 946999 - 946715 - | hypothetical protein PPA2355 947327 - 947043 - | hypothetical protein PPA0869 948139 - 947633 - | transcriptional regulator PPA0870 948480 - 948169 - | hypothetical protein PPA0871 948768 - 948499 - | hypothetical protein PPA0873 948926 - 948738 - | hypothetical protein PPA0874 949723 - 949031 - | hypothetical protein PPA0875 949848 - 951236 + | GntR family regulatory protein PPA0876 951486 - 951725 + | putative transposase subunit PPA0877 954596 - 952257 - | UvrA-like ABC transporter TERM 425 953239 - 953249 + g 71 -6.8 -4.19506 | TTCAGTTGGATTCCT GCAC GCA GTGC TTTTCCCGTTGGGGT TERM 426 953640 - 953630 - G 71 -8.2 -4.08216 | opp_overlap 953636 TCAGCCTTGCTAAAA CCGC TTG GCGG GGTGCCTCAGTTATC PPA2399 955017 - 954589 - | transcriptional repressor, MarR family PPA0878 956387 - 955443 - | SorC family transcriptional regulator PPA0879 956567 - 957559 + | putative phosphotriesterase ulaD 957565 - 958218 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 427 958298 - 958263 - g 78 -10.4 -3.97947 | GGCATCTATGAGAAA GCCCTCGTCAGCAACC CCTT GGCTACCGACGACGAC TGGCGACGCTTCCTA PPA0881 958215 - 959102 + | L-xylulose 5-phosphate 3-epimerase TERM 428 959110 - 959142 + F 75 -12 -3.32343 | gap 1 TCTTTTGACCCTGGG CTGGG-GGCTCGGCA TGAA TTCCGGGCCGCCCAG TTCTGCGCCTCTACA PPA0882 959190 - 959858 + | L-ribulose-5-phosphate 4-epimerase PPA0883 959855 - 960805 + | 2-keto-3-deoxygluconate kinase PPA0884 960840 - 962198 + | sugar transporter, permease protein PPA0885 962597 - 963625 + | hydroxyethylthiazole kinase PPA0886 963450 - 964262 + | thiamin-phosphate pyrophosphorylase PPA0887 964375 - 965343 + | L-lactate dehydrogenase PPA0888 965386 - 967092 + | malate dehydrogenase TERM 429 967072 - 967084 + T 71 -10.5 -3.54951 | TGGCAGCCGCGTTAC CCGCG CAT CGCGG TTGTCTGATGCGCTG PPA0889 967716 - 967162 - | putative glucoamylase S1/S2 precursor PPA0891 967856 - 968878 + | hypothetical protein PPA0892 969946 - 968888 - | mebrane associated protein, DUF125 TERM 430 969915 - 969891 - Gg 90 -14.3 -3.48395 | overlap 969892 AGGTGCGCGAGACAA CGGGCTACGAC GCA GTCGCAGCCCA GGAGAAGTGGTCCAA TERM 431 969914 - 969892 - Gg 78 -15.6 -2.68823 | overlap 969891 GGTGCGCGAGACAAC GGGCTACGAC GCA GTCGCAGCCC AGGAGAAGTGGTCCA leuS 969866 - 972346 + | leucyl-tRNA synthetase TERM 432 972367 - 972405 + FH 70 -12.3 -2.80074 | opp_overlap 972355, overlap 972365 972362 972379 TAACCCGTTCCGGCA CGAGGCGGCGGGCCTGT GGATA GCAGGCTGGCCGTCGCG TCGTGTTATCCACAG TERM 433 972379 - 972421 + FH 72 -9.2 -3.6715 | overlap 972367 972365 972362 GCACGAGGCGGCGGG CCTGTGGATAGCAGGCTG GCCGTCG CGTCGTGTTATCCACAGG TTTGAAATTGCCTGG TERM 434 972558 - 972529 - g 70 -10.7 -3.53012 | gap 1, overlap 972530 GCTGCCTGCCCGAAA CCTGGGGCC-CCGA CGC TCGGCGACCCCAGC GGAGGAGGAACCGGC TERM 435 972557 - 972530 - g 73 -14.2 -2.71712 | gap 1, overlap 972529 CTGCCTGCCCGAAAC CTGGGGCC-CCGA CGC TCGGCGACCCCAG CGGAGGAGGAACCGG PPA0894 972470 - 973321 + | ComE operon protein 1 PPA0895 973308 - 975662 + | putative ComE operon protein 3 TERM 436 977248 - 977235 - g 71 -8.1 -4.07568 | CGCCGCGCGTCAAAA GCCTC GAGG GAGGC CGAGGAGAGGCAGGC PPA0896 975792 - 977501 + | putative RNA helicase PPA0897 977948 - 978913 + | DNA polymerase III, delta subunit TERM 437 979002 - 978973 - T 79 -12.9 -3.35197 | gap 1, opp_overlap 978973 978970 978965 978963 GGGGACACACATCAA GCGCCCCAA-CCAC CCA GTGGGTCGAGGCGC TGTGTGTATTCTCCT PPA0898 979307 - 979041 - | 30S ribosomal protein S20 TERM 438 980728 - 980703 - H 72 -4.6 -4.59853 | CGAAGTCCGGAAAAA CGTCCGGAAG GTTCTT CTCCCAGGCG TCAACCTCGTCTTGA PPA0901 981470 - 983305 + | GTP-binding protein LepA PPA0902 983302 - 984309 + | O-succinylbenzoate synthase TERM 439 984507 - 984525 + GT 71 -13.1 -2.56596 | overlap 984503 TCGCCCTAGGGCTGG GCCGGGC TGGCT GCCCGGC TGCGTTAGTCACGAC TERM 440 985512 - 985529 + GT 71 -12.7 -2.56271 | overlap 985511 985509 985522 TCGGTGTGGGGTTGG GCACCGG TCGG CCGGTGC GTGTTGTCGTCGGCG PPA0903 984221 - 985837 + | menaquinone biosynthesis protein PPA0904 987165 - 985810 - | isochorismate synthetase, enterochelin biosynthesis PPA0905 987407 - 987216 - | hypothetical protein PPA0906 988879 - 987629 - | O-succinylbenzoic acid-CoA ligase TERM 441 988692 - 988663 - GR 79 -13.5 -3.03771 | overlap 988676 CGACATCTTGGAACA CCGCCGGAGGCAA CTCG TTGCCACCGGCCG GCACGAGCACCGACC PPA0907 989810 - 988821 - | naphthoate synthase PPA0908 990587 - 989835 - | hypothetical protein TERM 442 990081 - 990044 - G 77 -8.3 -4.32201 | gap 1, opp_overlap 990053, overlap 990037 CCAACCAACCGAAAA CGATCCCGG-ACGCCCCC AGG GTGATCGTTCCGGGAGCG CTGAAACACCACGCG TERM 443 990507 - 990484 - G 75 -8.3 -4.1648 | AGAAGAATCAAAGAA CTTATGTGA TTTTCT TCACATAAG GCGCATTGGCGTGGT PPA0909 990927 - 991595 + | acetyl-coenzyme A synthetase PPA0910 991632 - 991817 + | acetyl-CoA synthetase PPA0911 992396 - 993577 + | coproporphyrinogen III oxidase TERM 444 993871 - 993893 + G 76 -13.4 -3.09749 | TGGACCGGGGTTCTG GGTGGACGGG CAA CCCGTCAACC TGTGTATTCCCCCTC PPA0912 993629 - 994528 + | hypothetical protein PPA0913 994525 - 995286 + | inositol monophosphatase family protein PPA0914 996093 - 995305 - | putative metallo-beta-lactamase hrcA 996120 - 997139 + | heat-inducible transcription repressor TERM 445 997311 - 997280 - g 70 -3.6 -4.63527 | overlap 997265 997282 GGAGGAGTTCAAAAA GGTCCAAGAGGCTT ATGA AATCCTCCAGGATC CGCAAAAGCGCGCCG TERM 446 997520 - 997536 + G 73 -4.3 -4.66833 | overlap 997521 997522 GGTCCGAATGCGTCT TAGCCTC GCC GAGGCAG TTTTTGGCGTTACCA PPA0916 997143 - 998321 + | chaperone protein DnaJ2 PPA0917 998318 - 999058 + | hypothetical protein PPA0918 1000123 - 999077 - | putative zinc-binding sorbitol dehydrogenase TERM 447 999388 - 999422 + g 82 -15 -3.22388 | overlap 999389 GGGTGATGTTGGCCG GGGTCGCGGTGATGAT GAC GTCAGCACCGCGACCG TTGGTAAGTTCCATG TERM 448 999389 - 999421 + g 85 -18.5 -2.53112 | overlap 999388 GGTGATGTTGGCCGG GGTCGCGGTGATGAT GAC GTCAGCACCGCGACC GTTGGTAAGTTCCAT PPA0919 1002059 - 1000152 - | PTS system, mannitol-specific IIABC component TERM 449 1002222 - 1002184 - R 100 -22.6 -4.05747 | opp_overlap 1002184 1002187, overlap 1002187 TATAGCTGACATAAA CAACGGGGTCGGACAGAT GGC ATCCGTCCGACCCTGTTG TTATGCGTCGCCGCT TERM 450 1002184 - 1002222 + r 100 -22.6 -3.35798 | opp_overlap 1002184 1002187, overlap 1002187 TATAGCTGACATAAA CAACGGGGTCGGACAGAT GGC ATCCGTCCGACCCTGTTG TTATGCGTCGCCGCT TERM 451 1002187 - 1002219 + r 100 -18.5 -3.8211 | opp_overlap 1002184 1002187, overlap 1002184 AGCTGACATAAACAA CGGGGTCGGACAGAT GGC ATCCGTCCGACCCTG TTGTTATGCGTCGCC TERM 452 1002219 - 1002187 - R 100 -18.5 -4.15029 | opp_overlap 1002187 1002184, overlap 1002184 AGCTGACATAAACAA CGGGGTCGGACAGAT GGC ATCCGTCCGACCCTG TTGTTATGCGTCGCC PPA0920 1002651 - 1002250 - | hypothetical protein TERM 453 1002547 - 1002573 + g 77 -8.1 -4.29106 | gap 1, overlap 1002560 TTTCGAGAGGAGCCC GTCGA-CAGCTT CGGA AAGCTGATCGGC TTTCTTAATCTCGGC PPA0921 1004963 - 1002813 - | ATP-dependent DNA helicase PPA0922 1006263 - 1005046 - | putative UDP-N-acetylglucosamine pyrophosphorylase PPA0923 1007145 - 1006306 - | hypothetical protein PPA0924 1007244 - 1008485 + | queuine/archaeosine tRNA-ribosyltransferase PPA0925 1008533 - 1009882 + | putative two-component system sensor kinase PPA0926 1009882 - 1010538 + | putative two-component response regulator PPA0927 1010623 - 1011543 + | ABC transporter, ATP-binding protein PPA0928 1011540 - 1012307 + | putative ABC transporter PPA0929 1012329 - 1012751 + | putative ABC transporter permease protein PPA0930 1012748 - 1012963 + | hypothetical protein PPA0931 1013751 - 1012933 - | hypothetical protein TERM 454 1013507 - 1013485 - Gf 90 -5.6 -5.29445 | gap 1 CGGGAACAAGAAAAA GCCGCCATC GGTGGT GATGG-GGC CGAGCTGCACCCCTT PPA0932 1013723 - 1014646 + | proline iminopeptidase PPA0933 1015298 - 1015023 - | hypothetical protein TERM 455 1015237 - 1015206 - G 89 -13.1 -4.10161 | GATGACCGGGTAAAA TCGTCCATCCCGA ATGAAA TCTGGATGGACGA TGAAGGTGATAACGC PPA0934 1016017 - 1015295 - | hypothetical protein PPA0935 1016485 - 1016060 - | hypothetical protein PPA0936 1016522 - 1017541 + | PhoH-like protein PPA0937 1017538 - 1018005 + | putative metalloprotease PPA0938 1018002 - 1019300 + | putative hemolysin era 1019293 - 1020315 + | GTP-binding protein Era PPA0940 1021834 - 1020344 - | putative metal-dependent hydrolase TERM 456 1023130 - 1023104 - g 75 -7.8 -4.25056 | GACGCTATCAAGAAA GGCCTGGAGGAC CTC GAACGCCAGGCC CAGGAGCAGGGCATC PPA0941 1022078 - 1023781 + | 2-isopropylmalate synthase PPA0942 1024596 - 1023790 - | undecaprenyl pyrophosphate synthetase PPA0943 1025363 - 1024698 - | hypothetical protein TERM 457 1026194 - 1026231 + G 78 -15.7 -2.53876 | overlap 1026199 1026205 GCATATGGATCGTGG TTTGCGGTCAATGCCCC TTCT GGAGCGTTGATCGCAAA TCAGTTGCACTACGA recO 1025484 - 1026224 + | DNA repair protein RecO PPA0945 1027485 - 1026322 - | putative histidine kinase TERM 458 1026783 - 1026803 + g 77 -11.9 -3.70331 | opp_overlap 1026771 1026769 1026782, overlap 1026781 GTAGACGCTGAAGAT CGTCTAGGG CAG CTCTAGACG TGTTTTCGATCGATT TERM 459 1026927 - 1026981 + g 80 -11.6 -3.72324 | gap 2, overlap 1026915 GGAGCTCGGCCGCAA GCTGTTGACGTTCTTCTTCGCGGGCA TGCGC TGCCTGCT--GAAGAGCGTCGGCAGC TTGTTCCTCGGCCTG PPA0946 1027730 - 1027539 - | hypothetical protein PPA0947 1028068 - 1028739 + | two-component system response regulator PPA0948 1029153 - 1028740 - | metal uptake regulation protein PPA0949 1029249 - 1030769 + | glycyl-tRNA synthetase TERM 460 1030806 - 1030848 + F 86 -16.3 -2.70932 | opp_overlap 1030798, overlap 1030808 GAAAGCATCTCGGCA CACCGGGGTCGGGGCACTC ACGAC GATTATCCTGACCCCGGTG TCGTTGGAGAAAACA TERM 461 1030808 - 1030846 + F 74 -13.1 -2.90075 | opp_overlap 1030798, overlap 1030806 AAGCATCTCGGCACA CCGGGGTCGGGGCACTC ACGAC GATTATCCTGACCCCGG TGTCGTTGGAGAAAA PPA0950 1030909 - 1031679 + | putative succinate dehydrogenase subunit C TERM 462 1032059 - 1032075 + G 83 -2.1 -5.26875 | overlap 1032058 AACCCTCGGCCAGCT CGGCTAC CAC GTCGACG TTTTTTGCTTCCACG TERM 463 1032808 - 1032789 - g 71 -6.4 -4.15044 | gap 1 TGGGTGCCCAAGAAA GCCGG-CGA TGA TCGTCCAGC CAATGACATCCCGGA sdhA 1031676 - 1033808 + | succinate dehydrogenase flavoprotein subunit PPA0952 1033805 - 1034563 + | succinate dehydrogenase/fumarate reductase iron-sulfur subunit TERM 464 1034616 - 1034584 - T 100 -27.9 -3.05384 | TGGTCGCGTAGTGAA GGGCTGGTACCCGGA GGT TCCGGGTACCAGCCC TCGGCATGCAGTTGC PPA0953 1036528 - 1034762 - | phosphoribosyltransferase TERM 465 1035207 - 1035192 - G 70 -10.4 -3.55444 | overlap 1035196 CTTCCAGCTCCCAAA CCGACG GCCT CGTCGG GGCCCAACCCGGTCA TERM 466 1036599 - 1036627 + G 73 -8.9 -3.96148 | overlap 1036600 GCGGGTCGTGATTTC TCGTTGTGCCA CTGGCGC TGGCACGACGG TTTCTGCTCAACCGG PPA0954 1036576 - 1037811 + | NifR3 family TIM-barrel protein PPA0955 1037869 - 1038978 + | deoxyguanosinetriphosphate triphosphohydrolase PPA0956 1039720 - 1038998 - | hypothetical protein dnaG 1039796 - 1041667 + | DNA primase PPA0958 1041754 - 1042566 + | RNA polymerase sigma factor PPA0959 1042580 - 1043086 + | hypothetical protein PPA0960 1044380 - 1043400 - | putative luciferase-like monooxygenase PPA0961 1045825 - 1044422 - | alpha,alpha-trehalose-phosphate synthase TERM 467 1046457 - 1046433 - gH 78 -9.9 -3.97947 | TGGATCGAGGACAAA GGGCGCGCCGT CGC ACTGCACACCC GGCGAGCCTCCGACC PPA0962 1045785 - 1046843 + | phosphatase, putative trehalose-6-phosphatase PPA0963 1047389 - 1048324 + | cysteine synthase PPA0964 1049798 - 1048386 - | transcriptional regulator PPA0965 1049873 - 1050787 + | pyridoxine biosynthesis protein PPA0966 1050789 - 1051394 + | glutamine amidotransferase subunit PdxT TERM 468 1051638 - 1051602 - g 100 -25.3 -3.04792 | GCATGATGGGGAACA CCACCACGAGGTCATCG ATG CGATGGCCTCGTGGTGG TGCCAGATTCACGGT PPA0967 1051546 - 1052817 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase PPA0968 1052814 - 1053518 + | dethiobiotin synthetase TERM 469 1053781 - 1053792 + G 74 -7.2 -4.32857 | AGCGGGATCGGTTTA CGGG TACA CCCG TTTCTCTTTGGGACG TERM 470 1053915 - 1053926 + G 74 -5.8 -4.49939 | overlap 1053908 1053922 1053923 ACATTTGGCCCAGCG TCCC CATG GGGA TTTTCTCCCTTGTCT PPA0969 1053515 - 1054876 + | putative amino acid permease PPA0970 1055098 - 1054901 - | putative membrane efflux protein TERM 471 1055003 - 1054987 - G 71 -9.3 -3.74693 | opp_overlap 1054984 1054987 GCCGAGGCGAGTAAA CCTGCCG GGC CGGCCGG TGATGTGCTTCGATG PPA0971 1055539 - 1055724 + | hypothetical protein PPA0972 1056296 - 1056051 - | hypothetical protein PPA0973 1057639 - 1056842 - | putative hydrolase PPA2378 1058571 - 1057639 - | hypothetical protein TERM 472 1058529 - 1058503 - G 79 -9.5 -4.18018 | overlap 1058486 1058504 GGCGTCGAGCCAAAA CTCGTC-GACCCG CGG CGGGTCAGACG-G TTGCAGGGGTAGTGC PPA0974 1058723 - 1059841 + | MoxR-like ATPase PPA0975 1059852 - 1060895 + | putative MoxR PPA0976 1060892 - 1061860 + | aerotolerance protein BatA TERM 473 1062769 - 1062791 + G 78 -9.8 -3.86822 | TTAGCTCTCGTGGTG CTGACGGCGG CCT CCGTCATCAG TTTATGCGCCCGTTG PPA0977 1061857 - 1062813 + | aerotolerance protein BatA PPA0978 1062862 - 1063578 + | hypothetical protein PPA0979 1063656 - 1064153 + | hypothetical protein TERM 474 1064235 - 1064190 - T 82 -13.6 -3.25015 | gap 3, overlap 1064198 TCCAAGGACGAGGAA CCAT-G-A-GAGGGGGCTGATCA CGA TGACCAGCCCCCTCATCCCATGG ATGTCAGCGAGTGGC TERM 475 1064224 - 1064198 - T 100 -18.8 -2.87136 | overlap 1064190 CGAGGAACCATGAGA GGGGGCTGATCA CGA TGACCAGCCCCC TCATCCCATGGATGT PPA0980 1065510 - 1064239 - | 3-oxoacyl-[acyl-carrier-protein] synthase 1 TERM 476 1064491 - 1064517 + g 76 -9.4 -4.03234 | opp_overlap 1064469 1064467 CGTCATCGACTTGGT GCCGTTGACAAG CAC CTGGTCAGTGGC TTTCTCTAGGACCGC acpP 1065829 - 1065584 - | acyl carrier protein TERM 477 1065869 - 1065887 + r 76 -3 -4.93296 | overlap 1065857 TATCCTCGGGCTGTG CGCCCGAA GTC TGTGGGTG TTTTTCTCGTGATGA PPA0983 1066910 - 1065912 - | 3-oxoacyl-(acyl-carrier-protein) synthase III PPA0984 1067908 - 1066907 - | acyl-carrier-protein S-malonyltransferase PPA0985 1068882 - 1067968 - | 2-dehydropantoate 2-reductase PPA0986 1069244 - 1068879 - | hypothetical protein PPA0987 1069407 - 1070852 + | galactose-proton symporter PPA0988 1072122 - 1070881 - | hypothetical protein TERM 478 1071898 - 1071914 + g 71 -6.5 -4.1822 | ACCTGAGCGAGCCAC GATCGAG ATC CACGATC TTTCTTCGGCTGACA aceE 1072364 - 1075117 + | pyruvate dehydrogenase subunit E1 TERM 479 1075167 - 1075137 - f 81 -12.5 -3.63073 | opp_overlap 1075137 1075165 TAGACCGTCGAATAA CCGGGGCATTCCA TGATG TGGGCTGCCCCGG TTTTCGTTGAAGTCC TERM 480 1075137 - 1075167 + F 100 -15.4 -4.42238 | opp_overlap 1075137, overlap 1075165 TAGACCGTCGAATAA CCGGGGCATTCCAT GAT GTGGGCTGCCCCGG TTTTCGTTGAAGTCC PPA0990 1075289 - 1076197 + | endo-beta-N-acetylglucosaminidase H PPA0991 1076302 - 1076706 + | hypothetical protein PPA0992 1076963 - 1076718 - | beta-glucosidase fragment PPA0993 1077818 - 1077237 - | pyrazinamidase/nicotinamidase PPA0994 1077863 - 1078873 + | putative oxidoreductase protein PPA0995 1079025 - 1079600 + | pyrimidine regulatory protein PyrR pyrB 1079597 - 1080541 + | aspartate carbamoyltransferase catalytic subunit TERM 481 1080853 - 1080907 + G 80 -15.2 -3.04144 | gap 3, overlap 1080898 CCTGACCCCCATAGC CCCGAGCTCATGGCCGA--CCTCAACC GGAG GGTTGAGGAATCGGCCGTG-GTGCGGG TGTTGCCCATCGCCC PPA0998 1080538 - 1081875 + | dihydroorotase PPA0999 1081872 - 1082960 + | carbamoyl phosphate synthase small subunit TERM 482 1083783 - 1083828 + G 89 -16.3 -3.37499 | gap 1 AGATCGTTCGGACGC TTGGGATCGAGGGCG-GCTGCA ACG TCCAGCTCGCTCTCGATCCGAA TTCCTTCCAGTATTA carB 1082960 - 1086166 + | carbamoyl phosphate synthase large subunit TERM 483 1086720 - 1086734 + G 74 -6.4 -4.38154 | overlap 1086714 1086721 TCAGATTGCCGAGAC TGACGA GGC TCGTCG TTTTGTCCCCGATCT PPA1001 1086166 - 1086960 + | dihydroorotate dehydrogenase electron transfer subunit TERM 484 1087009 - 1087024 + G 73 -4.6 -4.67038 | overlap 1087011 TTAAGAACCCGATCA TGCCCG CCAG CGGGTG TTTTGGTTTTGGCGC PPA1002 1086957 - 1087880 + | dihydroorotate dehydrogenase B, catalytic subunit PPA1003 1087906 - 1088616 + | orotidine 5'-phosphate decarboxylase PPA1004 1088644 - 1089294 + | orotate phosphoribosyltransferase PPA1005 1090481 - 1089675 - | putative fructosamine kinase TERM 485 1091437 - 1091457 + G 73 -9.7 -3.95787 | CTGCGTCGCATGCGT CGATTCGGT GAC GCCGAGTCG TTTCTGAATATCATC PPA1006 1090492 - 1091937 + | radical SAM superfamily protein PPA1007 1092046 - 1092660 + | phosphatidylglycerophosphate synthase TERM 486 1092850 - 1092831 - g 82 -12.2 -3.61178 | GCCAGCGAGCTTAAA TCGACCCT GGCA AGGGTCGA CGCACAGTGGATAGC PPA1008 1092657 - 1093142 + | putative competence-damage inducible protein TERM 487 1093189 - 1093173 - f 70 -2.2 -4.8143 | opp_overlap 1093173, overlap 1093166 GCAAGAAGTGAAAAA TTCCGC GGTGT GGGGAA TGTTTCATGAAGGCG PPA1009 1093244 - 1093519 + | transcriptional regulator PPA1010 1094424 - 1093621 - | putative transcriptional regulatory protein PPA1011 1094790 - 1094969 + | hypothetical protein TERM 488 1095240 - 1095221 - f 71 -11.4 -3.26545 | gap 1 GCCACATATGATCAA CGTCGCGGC GGT GCCGCG-CG TCAAATGGGGCGGGA PPA1012 1095280 - 1096326 + | RecA protein TERM 489 1096466 - 1096515 + G 77 -11.6 -3.61715 | gap 3, overlap 1096485 CGATTCCAAAGGGGT GCCCGAACCTGTGCGTGAGGCGGTC CTC GATCGCCTCAC-CG-AGG-TGGGGC TTATTGACGACGCTG recX 1096356 - 1096871 + | recombination regulator RecX PPA1014 1096975 - 1098603 + | hypothetical protein PPA1015 1099543 - 1098644 - | putative aldose-1-epimerase PPA1016 1099707 - 1101248 + | putative C4-dicarboxylate anaerobic carrier DcuC PPA1017 1101309 - 1102793 + | MiaB family protein TERM 490 1102882 - 1102837 - T 86 -14.7 -3.2056 | opp_overlap 1102843, overlap 1102839 1102841 1102843 ACGGACAGTGAGGAA GATAGACGAGGGATGGCGCTC AATG GAGCACCACCCCTCGTGTTGC AGCACTTCCGCTCCC TERM 491 1102880 - 1102839 - T 88 -15.9 -3.16492 | opp_overlap 1102843, overlap 1102837 1102841 1102843 GGACAGTGAGGAAGA TAGACGAGGGATGGCGCTC AATG GAGCACCACCCCTCGTGTT GCAGCACTTCCGCTC TERM 492 1102878 - 1102841 - T 100 -18.5 -3.14134 | opp_overlap 1102843, overlap 1102839 1102837 1102843 ACAGTGAGGAAGATA GACGAGGGATGGCGCTC AATG GAGCACCACCCCTCGTG TTGCAGCACTTCCGC TERM 493 1102843 - 1102876 + T 89 -16.7 -3.03159 | opp_overlap 1102841 1102839 1102837 1102843 AGTGAGGAAGATAGA CGAGGGATGGCGCTC AATG GAGCACCACCCCTCG TGTTGCAGCACTTCC TERM 494 1102876 - 1102843 - T 100 -21.1 -3.12717 | opp_overlap 1102843, overlap 1102841 1102839 1102837 AGTGAGGAAGATAGA CGAGGGATGGCGCTC AATG GAGCACCACCCCTCG TGTTGCAGCACTTCC PPA1018 1103144 - 1102944 - | hypothetical protein miaA 1103263 - 1104222 + | tRNA delta(2)-isopentenylpyrophosphate transferase dapF 1104227 - 1105048 + | diaminopimelate epimerase PPA1021 1105133 - 1106584 + | GTP-binding protein TERM 495 1106975 - 1106951 - g 89 -15.7 -3.28924 | opp_overlap 1106941 TATTTGCCTGCATAA GGTGCGGGGTG GTT CAACCCGCACC AAGGGACAGGATGCC TERM 496 1108546 - 1108562 + G 76 -9.3 -4.13767 | ACGGCAATTTTCTGC GGGCGTC GAT GCCGCCC TTTTGGACTACGACC PPA1022 1106574 - 1108622 + | putative ATP-dependent helicase PPA1023 1109406 - 1108732 - | LexA repressor TERM 497 1109603 - 1109582 - g 73 -13.7 -2.80935 | gap 1 ATGTCATTGATGACA CCGGCGGACC TTT GG-CCGCCGG ACCCTCCCCGGGATA PPA1024 1109551 - 1110024 + | hypothetical protein PPA1025 1110246 - 1110755 + | transcriptional regulator NrdR PPA1026 1110837 - 1113689 + | vitamin B12-dependent ribonucleotide reductase TERM 498 1113699 - 1113732 + F 90 -15.9 -3.48276 | overlap 1113701 1113731 AGCTGATGACGCTAT GAGCGGGGGCGGGGC GGGT GCTACGCCCCCGCTG TTGTGTCCCACGCCA TERM 499 1113701 - 1113730 + F 100 -18.5 -3.31726 | overlap 1113699 CTGATGACGCTATGA GCGGGGGCGGGGC GGGT GCTACGCCCCCGC TGTTGTGTCCCACGC PPA1027 1113850 - 1114782 + | hypothetical protein PPA1028 1114866 - 1115720 + | putative universal stress protein UspA PPA1029 1116155 - 1120240 + | ATP-dependent helicase HrpA PPA1030 1120404 - 1121300 + | acyl-CoA thioesterase II PPA1031 1122295 - 1121357 - | RNA polymerase principal sigma factor HrdD TERM 500 1123199 - 1123175 - g 76 -12.9 -3.30443 | opp_overlap 1123175 1123178, overlap 1123178 CGAGCAGCAGATCAA CAAGGAGACCG AGG CGTTCTCCTTG TCTGATAACGATGAC TERM 501 1123196 - 1123178 - g 71 -8.8 -3.78778 | opp_overlap 1123175 1123178, overlap 1123175 GCAGCAGATCAACAA GGAGACCG AGG CGTTCTCC TTGTCTGATAACGAT PPA1032 1122642 - 1124162 + | RNA polymerase sigma factor TERM 502 1124175 - 1124209 + T 100 -20.1 -3.02511 | gap 1, opp_overlap 1124179, overlap 1124179 TGAGGATTTAGCAGA TGAACGGGGGGTGCCC ACTG GGGCGCCCCCCGT-CA TGTTGAGCCGGTCAG TERM 503 1124179 - 1124206 + T 100 -22 -2.73994 | opp_overlap 1124179, overlap 1124175 GATTTAGCAGATGAA CGGGGGGTGCCC ACTG GGGCGCCCCCCG TCATGTTGAGCCGGT TERM 504 1124206 - 1124179 - T 100 -19.8 -3.29947 | opp_overlap 1124179 1124175 GATTTAGCAGATGAA CGGGGGGTGCCC ACTG GGGCGCCCCCCG TCATGTTGAGCCGGT PPA1033 1126808 - 1124235 - | beta-mannosidase PPA1035 1128752 - 1127466 - | putative lipase PPA1034 1126914 - 1127522 + | transcriptional regulator PPA1036 1128805 - 1129053 + | hypothetical protein TERM 505 1129087 - 1129099 + F 73 -3.5 -4.76087 | CGCGACAAGCTAGGA TAAAT TAA ATTTA TTTATTTCTTGTGTC PPA1037 1129193 - 1129975 + | hypothetical protein PPA1038 1129953 - 1130246 + | hypothetical protein PPA1039 1130324 - 1131598 + | putative aminooxidase TERM 506 1131663 - 1131631 - f 100 -18.6 -3.40403 | gap 1, overlap 1131632 CTGCGGGGATGAGAA TGGGGGGTGGTACCG GGTT CGGTACCAC-CCCCA TCGACCGTCGCGAAC TERM 507 1131663 - 1131632 - f 100 -20.2 -2.64099 | overlap 1131631 TGCGGGGATGAGAAT GGGGGGTGGTACCG GGTT CGGTACCACCCCCA TCGACCGTCGCGAAC PPA1040 1131717 - 1132298 + | hypothetical protein PPA1042 1132798 - 1134894 + | DNA topoisomerase IV subunit B TERM 508 1136035 - 1136014 - g 76 -10.1 -3.72576 | opp_overlap 1136026 GGTGTGCTCACCAAA CCGCCTATG ACGT CATCGGCGG CGATCATGCTCATTA PPA1043 1135240 - 1136559 + | anaerobic C4-dicarboxylate transporter TERM 509 1137163 - 1137137 - g 76 -6 -4.58773 | gap 1, opp_overlap 1137127 1137126, overlap 1137161 TGGATCAAACCAAAA GTGGGTTGGTT TGGAGT AACCAAC-CAC GAAGGCATGAACATC TERM 510 1137538 - 1137569 + G 89 -6.6 -5.1101 | gap 1, overlap 1137539 CTTGCTGGGGCGCCT GGATGA-TCGCATCG GTC CGAAGCGACTCATCA TTTTTTCACTGATCG TERM 511 1137539 - 1137568 + G 73 -10.1 -3.65883 | gap 1, overlap 1137538 TTGCTGGGGCGCCTG GATGA-TCGCATCG GTC CGAAGCGACTCATC ATTTTTTCACTGATC PPA1044 1136612 - 1137955 + | major facilitator superfamily permease PPA1045 1140668 - 1138134 - | DNA topoisomerase IV subunit A PPA1046 1141826 - 1140732 - | hypothetical protein PPA1047 1141873 - 1142469 + | hypothetical protein PPA1048 1142466 - 1143593 + | type I phosphodiesterase / nucleotide pyrophosphatase PPA1049 1143596 - 1144246 + | thymidine kinase PPA1050 1145383 - 1144304 - | hypothetical protein PPA1051 1145592 - 1145888 + | hypothetical protein TERM 512 1145935 - 1145906 - T 100 -22.2 -3.47322 | opp_overlap 1145906 TCCTAGGAGAACGAA CGGACCCCCGCC CAGAGT GGCGGGGGTCCG TTGCTGTTGTCACGG TERM 513 1145906 - 1145935 + T 100 -22.2 -3.41745 | opp_overlap 1145906 TCCTAGGAGAACGAA CGGACCCCCGCC CAGAGT GGCGGGGGTCCG TTGCTGTTGTCACGG PPA1052 1146257 - 1145958 - | hypothetical protein TERM 514 1146605 - 1146628 + G 78 -4.4 -4.7497 | ATGAACTCGGTGATG CGGTCCAGCC ATCA GGTGGGGTCG TTTTTGGTGACTCGG PPA1053 1146299 - 1146829 + | hypothetical protein PPA1054 1146822 - 1147280 + | deoxyuridine 5'-triphosphate nucleotidohydrolase PPA1055 1147324 - 1148058 + | hypothetical protein PPA1056 1148061 - 1148453 + | hypothetical protein TERM 515 1148489 - 1148523 + T 75 -8.7 -4.02022 | gap 1, opp_overlap 1148506 TGCGATTTCCGCCCG CCTCACGGCCTAGT CAACTCCC ACTGGGC-GTGAGG TTTGTCATGGTTAGC PPA1057 1149193 - 1148534 - | Trk system potassium uptake protein PPA1058 1149911 - 1149234 - | Trk system potassium uptake protein TrkA TERM 516 1150727 - 1150743 + G 73 -10.1 -3.59233 | opp_overlap 1150727 1150729, overlap 1150710 1150724 CGGTGCACCGAAGTA CACCGGC TTG GTCGGTG TTGCTTTCGTCGTTC TERM 517 1151286 - 1151307 + G 80 -3.7 -5.04175 | overlap 1151287 TCCGTGACAGCGCTT ATCCAGCTA TACG TAGTTGGAG TTTTTATCTCCTTCA PPA1059 1150080 - 1152104 + | amino acid permease PPA1060 1152135 - 1153316 + | SAM-dependent methyltransferase related to tRNA TERM 518 1153642 - 1153621 - f 75 -11.7 -3.28712 | opp_overlap 1153621, overlap 1153641 GTGGCTTCTCGACAA GGTATCTTG ACGT CAAGATACC TTGTTCCGCCACGAG TERM 519 1153621 - 1153642 + F 77 -11.7 -3.61398 | opp_overlap 1153621 1153641 GTGGCTTCTCGACAA GGTATCTTG ACGT CAAGATACC TTGTTCCGCCACGAG PPA1061 1153711 - 1156377 + | aconitate hydratase TERM 520 1156380 - 1156414 + F 100 -15.9 -3.67498 | gap 1, overlap 1156383 GGCACGTAGTTGATG TACTGGGGCGGGAATC GGGT GGTTCCCGCCCCA-TA TTGTGTTCGAGATTG TERM 521 1156383 - 1156412 + F 100 -20.1 -3.41292 | overlap 1156380 ACGTAGTTGATGTAC TGGGGCGGGAATC GGGT GGTTCCCGCCCCA TATTGTGTTCGAGAT PPA1062 1156678 - 1158582 + | 1-deoxy-D-xylulose-5-phosphate synthase PPA1063 1159836 - 1158598 - | ribonuclease D PPA1064 1160402 - 1159833 - | hypothetical protein PPA1065 1160967 - 1160521 - | peptide methionine sulfoxide reductase MsrB PPA1066 1161931 - 1161158 - | hypothetical protein PPA1067 1162863 - 1162195 - | hypothetical protein TERM 522 1162340 - 1162330 - G 71 -8.2 -4.11183 | opp_overlap 1162331, overlap 1162331 TTTGAGCAGAAAGAA GCCG CGA CGGC GCAGTTCGTCGACTA TERM 523 1163031 - 1163011 - H 80 -9.8 -4.16279 | opp_overlap 1163009, overlap 1163028 GAGAGGATTGCAAAA TCCGTTGA GGGAA TCAACGGA AATTGGTCAACATCC tnaA 1163084 - 1164460 + | tryptophanase TERM 524 1165759 - 1165782 + G 78 -4.5 -4.84359 | overlap 1165763 GGATGCCCGGTAATC CCGTCACCA GTTACG TGGTGTTGG TTTTTCTGGCGCTCG PPA1069 1164465 - 1165919 + | aromatic amino acid transport protein TERM 525 1167143 - 1167171 + F 78 -14.6 -2.6927 | opp_overlap 1167143, overlap 1167140 GTGGGGATGACAAAA GGGTTGGCCAAC TTGTC GTCGGCCAACCC TGCTCTGTGGGCGAT TERM 526 1167171 - 1167143 - f 100 -16.8 -4.46212 | opp_overlap 1167140 1167143 GTGGGGATGACAAAA GGGTTGGCCAAC TTGTC GTCGGCCAACCC TGCTCTGTGGGCGAT PPA1072 1168051 - 1169112 + | Zn-dependent alcohol dehydrogenase PPA1073 1169261 - 1170601 + | putative two-component system sensor kinase thrS 1171319 - 1173373 + | threonyl-tRNA synthetase PPA1077 1172709 - 1173926 + | putative HIT family protein PPA1078 1173919 - 1174542 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PPA1079 1174588 - 1175241 + | putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase PPA1080 1175238 - 1176005 + | membrane associated protein PPA1081 1176048 - 1176380 + | small basic protein PPA1082 1176373 - 1177125 + | hypothetical protein PPA1083 1177190 - 1177594 + | putative glycine cleavage system H protein TERM 527 1178147 - 1178106 - g 73 -10.1 -3.63627 | GGTGCAGATCGGAAA GTTCCGGATGACCTACCAC ACCG GTGGTACGGCATCGGGGAC GAGTGGGGCCGGTCG PPA1084 1177591 - 1178169 + | putative signal transduction protein GarA PPA1085 1178169 - 1178882 + | regulatory protein PPA1086 1178913 - 1179392 + | hypothetical protein PPA1087 1179574 - 1180161 + | transcriptional regulator PPA1088 1180269 - 1181525 + | putative tRNA-processing ribonuclease PPA1089 1181756 - 1182907 + | putative oxalate/formate-specific permease PPA1090 1184187 - 1182988 - | pyrophosphate--fructose-6-phosphate 1-phosphotransferase PPA1091 1184237 - 1184785 + | hypothetical protein PPA1092 1184764 - 1185432 + | Sua5/YciO/YrdC domain-containing protein TERM 528 1186137 - 1186118 - g 82 -12.1 -3.62775 | AGCATTCCTTAACAA CGCGGCC CATCGT GGCCGCG ACCTCGCTCACGCCT PPA1093 1185480 - 1186181 + | 5`-methylthioadenosine/S-adenosylhomocysteine nuclosidase PPA1094 1187119 - 1186190 - | hypothetical protein PPA1095 1187796 - 1187146 - | hypothetical protein PPA1096 1189547 - 1187793 - | membrane spanning protein TERM 529 1189184 - 1189166 - G 70 -10.2 -3.46629 | overlap 1189167 CGAAGAGAATATTAA GTGGGCCC GGC GGGCCCAG CTGCAGGGCGTGCCA TERM 530 1189183 - 1189167 - G 72 -13.7 -2.67255 | overlap 1189166 GAAGAGAATATTAAG TGGGCCC GGC GGGCCCA GCTGCAGGGCGTGCC PPA1097 1189699 - 1189544 - | hypothetical protein PPA1098 1190360 - 1189749 - | molecular chaperone PPA1099 1191412 - 1190396 - | hypothetical protein PPA1100 1191527 - 1192303 + | peptidyl-prolyl cis-trans isomerase B PPA1101 1193125 - 1192307 - | putative esterase/lipase YbfF PPA1102 1193412 - 1194209 + | hypothetical protein PPA1103 1195610 - 1194273 - | putative adhesion/surface protein TERM 531 1195727 - 1195690 - R 72 -9 -3.91911 | overlap 1195692 1195712 CTCACCGGAACGAAA CAGACCCCGGGGCCAA GATAAA CCGGTCCCGGGGTCAA CCTCAGTGACGTGAC TERM 532 1195725 - 1195692 - R 83 -13.8 -3.5486 | overlap 1195690 1195712 CACCGGAACGAAACA GACCCCGGGGCCAA GATAAA CCGGTCCCGGGGTC AACCTCAGTGACGTG PPA1104 1196202 - 1195744 - | methylmalonyl CoA epimerase TERM 533 1195862 - 1195912 + g 72 -11.9 -3.36327 | gap 2, opp_overlap 1195872, overlap 1195870 CCGATGGAGGGCTCG CC-GGTGAAGACGG-CGCCACGCTC CTT GAGGGTGGCGATCGTCTTGTCCAGG TTGTAGGTGCGGTAG TERM 534 1195870 - 1195903 + g 81 -13.9 -3.34233 | gap 1, opp_overlap 1195872, overlap 1195862 GGGCTCGCCGGTGAA GACGG-CGCCACGCTC CTT GAGGGTGGCGATCGTC TTGTCCAGGTTGTAG TERM 535 1196831 - 1196777 - g 100 -36 -2.87963 | opp_overlap 1196777 1196782, overlap 1196782 TCCACAACCACCATA CGCAACGCAGTATCGCCCCGACCACT TCG AGGGGTCGGGGCGATACTGCGTTGGG TCCTTCAGCCTTTGA TERM 536 1196777 - 1196831 + G 100 -36 -2.74514 | opp_overlap 1196777 1196782, overlap 1196782 TCCACAACCACCATA CGCAACGCAGTATCGCCCCGACCACT TCG AGGGGTCGGGGCGATACTGCGTTGGG TCCTTCAGCCTTTGA TERM 537 1196782 - 1196826 + G 100 -33.1 -3.13164 | opp_overlap 1196777 1196782, overlap 1196777 AACCACCATACGCAA CGCAGTATCGCCCCGACCACT TCG AGGGGTCGGGGCGATACTGCG TTGGGTCCTTCAGCC TERM 538 1196826 - 1196782 - g 100 -33.1 -3.15212 | opp_overlap 1196782 1196777, overlap 1196777 AACCACCATACGCAA CGCAGTATCGCCCCGACCACT TCG AGGGGTCGGGGCGATACTGCG TTGGGTCCTTCAGCC PPA2380 1196568 - 1196846 + | hypothetical protein PPA1105 1198467 - 1196836 - | phosphoglucomutase PPA1106 1198591 - 1199532 + | putative thioredoxin PPA1107 1199728 - 1200471 + | haloacid dehalogenase-like hydrolase PPA1108 1200468 - 1202975 + | trehalose phosphorylase TERM 539 1203033 - 1202985 - T 100 -18.2 -3.39327 | gap 1, opp_overlap 1202989 TCGTGAGACTGATAA CGAC-GGGAGGAGGCCGGCACCA TTCG CGGTGTCGGCCTCCTCCATATCG TGGAGGTACGGTGCG TERM 540 1202989 - 1203028 + T 100 -21.5 -2.79183 | opp_overlap 1202985 GAGACTGATAACGAC GGGAGGAGGCCGGCACC ATTCGC GGTGTCGGCCTCCTCCA TATCGTGGAGGTACG PPA1109 1205120 - 1203075 - | phosphoenolpyruvate sugar phosphotransferase PPA1110 1206183 - 1205389 - | putative pyrophosphohydrolase PPA1111 1208141 - 1206207 - | glycogen branching enzyme TERM 541 1207896 - 1207862 - G 70 -12.1 -2.94912 | overlap 1207890 TGCGGAACTTATAGA GGGTTCCCTCGTCGA CTCCT TCGACGAAGGTGCCC CAGACTCCGGACCCC PPA1112 1209518 - 1208220 - | hypothetical protein PPA1113 1211362 - 1209515 - | trehalose synthase PPA1114 1213410 - 1211284 - | putative alpha-amylase PPA1115 1215782 - 1213662 - | putative glycogen debranching enzyme TERM 542 1216666 - 1216684 + G 70 -10.2 -3.5525 | opp_overlap 1216652, overlap 1216667 AGCCGGTGGCATTGG CCTGCGGC TTC GCCGCAGC TTTACGCGCCTGTGT TERM 543 1216667 - 1216683 + G 73 -13.7 -2.72829 | opp_overlap 1216652, overlap 1216666 GCCGGTGGCATTGGC CTGCGGC TTC GCCGCAG CTTTACGCGCCTGTG PPA1116 1215939 - 1217078 + | aminotransferase class V, putative cysteine desulfurase trmU 1217168 - 1218268 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PPA1118 1218265 - 1219251 + | putative B12 independent methionine synthase PPA1119 1219262 - 1219474 + | hypothetical protein PPA1120 1220012 - 1219500 - | hypothetical protein TERM 544 1219609 - 1219587 - G 75 -2.7 -5.0065 | overlap 1219590 CACCCACAAAGAAAA CCACCAAAA ATTCA TCTTGGTCG TCGCGGCGTAAATGA PPA1121 1220768 - 1220019 - | hypothetical protein TERM 545 1220642 - 1220684 + g 70 -10 -3.54424 | opp_overlap 1220630 1220674, overlap 1220630 1220638 TCATGAGCACTCCCT CATTGTTGCGGGTTGG TCCGACGATCC CCAAACCGCAGCAATG TTTGGGCGGGTCACG PPA1122 1220772 - 1221095 + | glutamyl-tRNA(Gln) amidotransferase subunit C gatA 1221092 - 1222597 + | aspartyl/glutamyl-tRNA amidotransferase subunit A gatB 1222594 - 1224087 + | aspartyl/glutamyl-tRNA amidotransferase subunit B PPA1125 1224745 - 1224110 - | hypothetical protein hisI 1224834 - 1225211 + | phosphoribosyl-AMP cyclohydrolase PPA1127 1225208 - 1225525 + | hypothetical protein PPA1128 1225522 - 1226211 + | hypothetical protein PPA1129 1226325 - 1226540 + | hypothetical protein PPA1130 1226541 - 1227341 + | indole-3-glycerol phosphate synthase 1 PPA1131 1227369 - 1228625 + | tryptophan synthase subunit beta TERM 546 1228762 - 1228820 + GF 73 -12.5 -2.71364 | GGGCACTACTGGGAC CGGTGTCGACC-TCGTCGTGATCGGAATG CCT TACTCCGACC-CGATGATGGACGGCACCG TCATTCAGCACGTCA PPA1132 1228622 - 1229119 + | tryptophan synthase alpha chain PPA1133 1229065 - 1229955 + | prolipoprotein diacylglyceryl transferase TERM 547 1232933 - 1232919 - g 87 -10 -4.36262 | ACATCCAGATCAAAA TGGCTC AGG GAGCCA AACCGGGCGAGGGTG PPA1134 1230077 - 1234594 + | large subunit of NADH-dependent glutamate synthase PPA1135 1234587 - 1236059 + | glutamate synthase small subunit PPA1136 1236096 - 1236425 + | hypothetical protein PPA1137 1236477 - 1238549 + | hypothetical protein PPA1138 1239123 - 1238728 - | hypothetical protein PPA1139 1239375 - 1239148 - | hypothetical protein PPA1140 1240257 - 1239385 - | putative transcriptional regulator TERM 548 1239520 - 1239487 - G 73 -4.5 -4.64861 | gap 1, overlap 1239495 GCGCGCGAAAAGAAA GTCCACAACGGCTAGC TGT GCCATCCGAC-TGGAC ATCGCACCTGCGCGA TERM 549 1240567 - 1240579 + G 78 -10.5 -3.88498 | CAGTGAAGGGTCTGT CGGCC GGA GGCCG TTTGATCTATGCCGG murQ 1240383 - 1241297 + | N-acetylmuramic acid-6-phosphate etherase TERM 550 1241345 - 1241381 + G 79 -8.8 -4.1466 | opp_overlap 1241345 1241347, overlap 1241338 1241347 TGCTTGCACGAGAAA TACTCGATCTTGTTGG AGGGC CCGACAATATCGAGTC TTTTACCAATTGCAT TERM 551 1241379 - 1241347 - g 73 -9.9 -3.57406 | opp_overlap 1241338 1241345 1241347, overlap 1241345 CTTGCACGAGAAATA CTCGATCTTGTTGGA GGG CCCGACAATATCGAG TCTTTTACCAATTGC TERM 552 1241347 - 1241379 + G 77 -11.4 -3.67 | opp_overlap 1241347 1241345, overlap 1241338 1241345 CTTGCACGAGAAATA CTCGATCTTGTTGG AGGGC CCGACAATATCGAG TCTTTTACCAATTGC PPA1142 1241275 - 1242834 + | PTS system, sucrose-specific IIBC component TERM 553 1243046 - 1243072 + G 74 -11.7 -3.46848 | gap 1, opp_overlap 1243048 GGTGGTGCTTGGAAC GACCGCGAT-TG TTCA CAGATCGCGGTC TTCTGGTGGCTTTTA PPA1143 1242841 - 1243284 + | hypothetical protein PPA1144 1243274 - 1244209 + | putative N-acetylglucosamine kinase TERM 554 1244501 - 1244511 + G 74 -6.8 -4.30576 | TGGACCCTTACCTTG CGAC GCC GTCG TTTTGCTCCTCAGCC TERM 555 1244592 - 1244570 - g 76 -7 -4.5265 | gap 1 AACTATACGAGAAAA CCTGCGGCG TCATGC CGCC-CAGG CAGGAGTGGGAATAC PPA1145 1244212 - 1245216 + | hypothetical protein TERM 556 1246224 - 1246206 - g 78 -4.4 -4.7657 | GAAAAACGTGAAAAA GTCCCCGG AAA CCTGGTAC CAACATTGAGAAACC PPA1146 1245213 - 1246643 + | beta-glucosidase PPA1147 1246671 - 1246982 + | PTS system, lichenan-specific IIB component TERM 557 1247057 - 1247021 - g 86 -18.1 -2.85351 | opp_overlap 1247012 TTCTTGGATAGGAGA GTGGCTGCTCCGATGTC GAT GATATCGGAGCAGCGAC ATATCCGGGCTATTC TERM 558 1248097 - 1248112 + G 74 -6 -4.56597 | GCCGTGGACGTTACC CGCTCC AATA GGCGCG TTTTTGACGACGGGC PPA1148 1246988 - 1248256 + | PTS system, cellobiose-specific IIC component PPA1149 1248298 - 1248618 + | PTS cellobiose-specific component IIA PPA2379 1249066 - 1249416 + | hypothetical protein dnaE 1249423 - 1253085 + | DNA polymerase III subunit alpha PPA1151 1253082 - 1253636 + | hypothetical protein TERM 559 1254119 - 1254135 + G 91 -13.7 -3.794 | overlap 1254126 CTATCGCTGTAGCAT CTCCGCC CCA GGCGGAG TTTGGTGGGTTGCCG hisD 1253641 - 1254960 + | histidinol dehydrogenase PPA1153 1254957 - 1256123 + | histidinol-phosphate aminotransferase PPA1154 1256120 - 1256740 + | imidazoleglycerol-phosphate dehydratase hisH 1256697 - 1257350 + | imidazole glycerol phosphate synthase subunit HisH PPA1156 1257363 - 1258130 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase PPA1157 1258280 - 1259074 + | hypothetical protein TERM 560 1259127 - 1259085 - g 73 -9.9 -3.62275 | gap 2, opp_overlap 1259080, overlap 1259111 AGTGAGCATTCCAAA GTCGACCCCC--GACCGGCGT GTT ACAAGGGTCATGGGGGTCGAC CCTGGTTTAACCCGG ruvC 1259071 - 1259661 + | Holliday junction resolvase PPA1159 1259658 - 1260263 + | holliday junction DNA helicase RuvA TERM 561 1260952 - 1260985 + G 90 -18.3 -3.14344 | gap 1 ACACACGATTGCGTC GCGGTCTCGCGGTACG CCC CGTATCGCGA-ACCGC TTGCTGCGACGGGTC ruvB 1260311 - 1261339 + | Holliday junction DNA helicase B PPA1161 1261364 - 1261831 + | translocase subunit TERM 562 1262849 - 1262839 - g 71 -6.8 -4.1899 | TCACTTCACCCAAAA CAGC GCG GCTG ATCTCGCCAACGTCT secD 1261862 - 1263562 + | preprotein translocase subunit SecD secF 1263564 - 1264739 + | preprotein translocase subunit SecF PPA1164 1264736 - 1265269 + | adenine phosphoribosyltransferase TERM 563 1265470 - 1265490 + G 71 -5.4 -4.4261 | overlap 1265464 TCCACCGCTGGAGAC GGCGTC TCGCTCATT GACGCC TTTTACTATTCAACG PPA1165 1265272 - 1266366 + | ion channel membrane protein PPA1166 1266496 - 1268820 + | GTP pyrophosphokinase TERM 564 1268877 - 1268834 - Tf 71 -11.6 -3.29461 | GAAGGTTGCCTAGAA CGCCAACGGCCCCGGGTC TGGGAAGT GTTCCGAGGCCGTCAGCG GTGACCATCAGGCGC PPA1167 1270168 - 1268885 - | putative ATPase involved in DNA repair PPA1168 1270161 - 1270832 + | metallo-beta-lactamase superfamily protein hisS 1270932 - 1272296 + | histidyl-tRNA synthetase PPA1170 1273045 - 1272353 - | hypothetical protein PPA1171 1273628 - 1273038 - | acetyltransferase PPA1172 1278068 - 1273635 - | fused activator of 2-hydroxyglutaryl-CoA dehydratase/hypothetical protein TERM 565 1276537 - 1276551 + g 74 -5.6 -4.44915 | opp_overlap 1276534, overlap 1276536 1276540 GCAGCAATATCAGCG GGAGAG GCC CCCTCC TTTTGTGCCTGCTTG PPA1173 1278152 - 1278796 + | TetR family transcriptional regulator PPA1174 1278916 - 1279986 + | hypothetical protein TERM 566 1279998 - 1280039 + F 100 -20.9 -3.63068 | overlap 1280001 GTGATCCGATTTGAG GGACGGACGCCGTGGCGGT TGTG ATCGCCACGGCGTCCGTAG TTTCGGATGCTATGG TERM 567 1280001 - 1280036 + F 100 -27 -2.93089 | overlap 1279998 ATCCGATTTGAGGGA CGGACGCCGTGGCGGT TGTG ATCGCCACGGCGTCCG TAGTTTCGGATGCTA aspS 1280167 - 1281987 + | aspartyl-tRNA synthetase PPA1176 1282092 - 1283477 + | recombination factor protein RarA TERM 568 1283692 - 1283675 - g 73 -9.9 -3.59262 | GGCGAGATTTCCAAA CTCGATC AGGT GATCGAG GACATCCACACCATT PPA1177 1283474 - 1283935 + | hypothetical protein alaS 1284081 - 1286759 + | alanyl-tRNA synthetase PPA1179 1286756 - 1287238 + | endonuclease TERM 569 1288015 - 1287982 - g 74 -6.2 -4.4874 | gap 1, overlap 1287986 1288014 GCCAAAAAGCCAAAA GATATGCAGATGATC GCCGG GATCATCTACA-ACC GCCTCCAACAAGGAA TERM 570 1288012 - 1287986 - g 70 -10.3 -3.47303 | overlap 1287982 AAAAGCCAAAAGATA TGCAGATGATC GCCGG GATCATCTACA ACCGCCTCCAACAAG PPA1180 1287235 - 1288344 + | aminodeoxychorismate lyase PPA1181 1288376 - 1289182 + | shikimate 5-dehydrogenase PPA1182 1289196 - 1290392 + | chorismate synthase PPA1183 1290389 - 1290892 + | shikimate kinase PPA1184 1290895 - 1291980 + | 3-dehydroquinate synthase PPA1185 1293264 - 1292023 - | putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) PPA1186 1294215 - 1293265 - | hypothetical protein PPA1187 1294492 - 1295061 + | elongation factor P PPA1188 1295058 - 1295843 + | putative NusB-family protein TERM 571 1295896 - 1295854 - f 74 -13.5 -2.51173 | gap 1, overlap 1295853 ACTAAGCGGACTAAT GTGCCGATCGTCTCCATCGG GTCC CCGGTGGAGACGATCATC-C GCTGTCGCGCGGAGG PPA1189 1295939 - 1296259 + | integration host factor PPA1190 1296314 - 1296913 + | guanylate kinase PPA1191 1296934 - 1297281 + | DNA-directed RNA polymerase subunit omega TERM 572 1298197 - 1298173 - g 83 -2 -5.28683 | gap 1, overlap 1298176 1298178 ACCAAGATTAAAAAA CACGAG-GGCG ACGA CGCCACAGGTG CAACGATGGCCCTCC PPA1192 1297294 - 1298526 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase PPA1193 1298566 - 1299759 + | S-adenosylmethionine synthetase TERM 573 1300052 - 1300038 - g 74 -5.7 -4.56597 | opp_overlap 1300037 GCCCCGGTTGAAAAA CTGGT GTCCG ACCAG GTAGTTGCTACACCA PPA1194 1299798 - 1301816 + | primosome assembly protein PriA PPA1195 1301835 - 1302782 + | methionyl-tRNA formyltransferase PPA1196 1302779 - 1304155 + | tRNA/rRNA cytosine-C5-methylase PPA1197 1304295 - 1305065 + | hypothetical protein PPA1198 1305348 - 1306193 + | cAMP factor TERM 574 1306204 - 1306258 + F 73 -11.4 -3.35224 | overlap 1306202 1306245 CCTGATACATCTCAT TCCCAGACGCGATCCTCGAGACTGCT TGT GGTGGTCTTGAGGATCGCGTGCGCAA TGTTTGCCGCGGTCT PPA1199 1306372 - 1307043 + | ribulose-phosphate 3-epimerase PPA1200 1307845 - 1307060 - | hypothetical protein PPA1201 1307978 - 1309987 + | putative methyltransferase TERM 575 1310019 - 1310056 + T 100 -15.5 -4.38154 | overlap 1310022 1310023 TTATTATCTCACGTT GTACGAGGGCCGGCGGG TCAT TCTGCCGGCCCTCCTTC TTTTGTCACGGGTGT TERM 576 1310022 - 1310053 + T 100 -15.8 -4.30995 | overlap 1310019 1310023 TTATCTCACGTTGTA CGAGGGCCGGCGGG TCAT TCTGCCGGCCCTCC TTCTTTTGTCACGGG TERM 577 1310023 - 1310052 + T 100 -19.3 -3.18115 | overlap 1310022 1310019 TATCTCACGTTGTAC GAGGGCCGGCGGG TCAT TCTGCCGGCCCTC CTTCTTTTGTCACGG PPA1202 1310451 - 1310062 - | hypothetical protein PPA1203 1312634 - 1310448 - | membrane spanning protein YhgE PPA1204 1313543 - 1312638 - | hypothetical protein PPA1205 1314163 - 1313543 - | TetR family transcriptional regulator TERM 578 1314222 - 1314240 + H 74 -13.2 -2.89564 | opp_overlap 1314195 CGGTACCACCGGTAT CGGATACC AAT GGTATCCG TCTCTAGGGTCCAGC PPA1206 1314310 - 1315146 + | 20S proteasome beta-subunit precursor PPA1207 1315143 - 1315823 + | 20S proteasome alpha-subunit PPA1208 1315636 - 1316907 + | prephenate dehydrogenase PPA1209 1316970 - 1317641 + | cytidylate kinase engA 1317706 - 1319076 + | GTP-binding protein EngA PPA2381 1319689 - 1319378 - | hypothetical protein PPA1211 1320617 - 1319703 - | ribokinase family sugar kinase PPA1212 1321692 - 1320619 - | hypothetical protein PPA1213 1323112 - 1321679 - | L-fucose permease TERM 579 1322154 - 1322140 - G 72 -2.8 -4.73297 | CAAGGAAGAAAGAAA TGAATG CAG CAATCA AATAGTTCGCGGCAG TERM 580 1322278 - 1322266 - G 70 -4.1 -4.59853 | opp_overlap 1322276, overlap 1322251 GGAACTGTGTAAAAA TTCCA GCA CGGAA CAAACGGTTCTTCGC PPA1214 1323762 - 1323109 - | deoxyribose-phosphate aldolase PPA1215 1325003 - 1323864 - | sugar-binding domain-containing protein TERM 581 1324409 - 1324384 - G 84 -11.1 -4.07868 | gap 1, opp_overlap 1324383 GCACATTGATACAAA GCCCGCG-GCCG CAG CGGCGCACAGGC CATTTCCAGCGCGCA PPA1216 1325051 - 1325839 + | HAD superfamily hydrolase TERM 582 1325867 - 1325885 + T 82 -6.7 -4.84017 | AGACCAGGGATAGCT CTTTGGC CTCGC GCCAGAG TTTTTCTCGGGCATT PPA1217 1327067 - 1325850 - | 4-hydroxybutyrate coenzyme A transferase TERM 583 1326677 - 1326665 - G 71 -9.1 -3.73534 | opp_overlap 1326663 TAACCTGAGCAATAA CGAGG GCT CCTCG GCGTTTCGCTGATTC PPA1218 1327111 - 1328370 + | homoserine acetyltransferase PPA1220 1328367 - 1328858 + | AsnC family transcriptional regulator PPA1221 1328855 - 1330444 + | apolipoprotein N-acyltransferase PPA1222 1330425 - 1331243 + | glycosyl transferase TERM 584 1331288 - 1331249 - T 73 -12.8 -2.80816 | gap 1, opp_overlap 1331240 1331239, overlap 1331269 TCGCCACTGACCAGA CGTGCGCCCCATGGATCAC ATC GCG-TCCGCGGGGCGCACC TCGGCGGGATTAATT PPA1223 1331630 - 1331298 - | hypothetical protein TERM 585 1331772 - 1331719 - R 87 -14.7 -3.40403 | gap 1, opp_overlap 1331722, overlap 1331720 1331723 TCTCGGGGAGCAGAA CGGAT-GGCCACTACCGTACGTTCAC TTC GTGGACGTACGGTAGTGGCCGATAAT GTCAGCCATCACAGT TERM 586 1331771 - 1331720 - R 95 -18.2 -2.64099 | gap 1, opp_overlap 1331722, overlap 1331719 1331723 CTCGGGGAGCAGAAC GGAT-GGCCACTACCGTACGTTCAC TTC GTGGACGTACGGTAGTGGCCGATAA TGTCAGCCATCACAG TERM 587 1331722 - 1331768 + r 100 -26.8 -2.62616 | opp_overlap 1331720 1331719 1331723 CGGGGAGCAGAACGG ATGGCCACTACCGTACGTTCAC TTC GTGGACGTACGGTAGTGGCCGA TAATGTCAGCCATCA TERM 588 1331767 - 1331723 - R 100 -25.9 -2.61548 | opp_overlap 1331722, overlap 1331720 1331719 GGGGAGCAGAACGGA TGGCCACTACCGTACGTTCAC TTC GTGGACGTACGGTAGTGGCCG ATAATGTCAGCCATC PPA1224 1332517 - 1331792 - | putative glycerophosphoryl diester phosphodiesterase PPA1226 1335102 - 1333456 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase PPA1225 1332641 - 1333519 + | pyridoxamine kinase TERM 589 1334689 - 1334701 + gF 78 -6.2 -4.56597 | opp_overlap 1334677 1334688 ACAGGCGCATAGCAG CGCG ACGGC CGCG TTTTTGGAGGACCGC PPA1227 1335132 - 1336535 + | dihydrolipoamide dehydrogenase PPA1228 1337540 - 1336629 - | cation-efflux transport protein PPA1229 1337956 - 1337537 - | putative transcription regulator PPA1230 1338905 - 1338171 - | hypothetical protein TERM 590 1339041 - 1339007 - R 100 -29.4 -3.63694 | ATTGAGGGTGAACAA GGCCGGCCACAGGAGG AAT CCTCCCGTGGCCGGCC TCTGCGAAAATGTCC PPA1231 1339876 - 1339073 - | cAMP factor TERM 591 1339185 - 1339197 + g 71 -7.7 -4.07618 | TTGGCACGGACTTTG TCAGC CTT GCTGA TTTCCTTGTTCAGAG PPA1232 1340683 - 1340258 - | hypothetical protein PPA1233 1342060 - 1340864 - | putative multidrug-efflux transporter protein TERM 592 1341171 - 1341148 - G 70 -12.4 -2.96249 | overlap 1341145 1341142 1341133 1341131 GGCCACCAAGAACGA CCCCGATCAC TTGT GGGATCGGGG AGATCCAGGTGGCAA PPA1234 1342319 - 1342888 + | hypothetical protein TERM 593 1343040 - 1342999 - g 74 -10.9 -3.53091 | gap 1, opp_overlap 1343020 1343021, overlap 1343021 ACCCCCGTCGCCAAA TGCGCCG-AGGATGCAGCGA GAA TCGCTGCACACTGCAGCGAA TTTGAGGATCTCGAC TERM 594 1343039 - 1343021 - g 81 -13.2 -3.37056 | opp_overlap 1343021 1343020, overlap 1342999 AGGATGCAGCGAGAA TCGCTGCA CAC TGCAGCGA ATTTGAGGATCTCGA TERM 595 1343021 - 1343039 + G 73 -13.2 -2.75343 | opp_overlap 1342999 1343021, overlap 1343020 AGGATGCAGCGAGAA TCGCTGCA CAC TGCAGCGA ATTTGAGGATCTCGA PPA1235 1342891 - 1343727 + | uracil-DNA glycosylase PPA1236 1343890 - 1344555 + | cobalamin adenosyltransferase PPA1237 1345032 - 1344556 - | putative secreted protein TERM 596 1344946 - 1344917 - G 100 -10.1 -5.26918 | gap 1 AGACCGCATAAAAAA GCACCGCG-TCT ACGCATG AGAACGCGGTGC CTAATAAGAAGCCAC TERM 597 1345172 - 1345135 - R 74 -13.5 -2.62184 | opp_overlap 1345130 1345135 TTCTCGCTGACAGGA GCGTGGGTCGTTGCAAC GGCC ACTACAACGACCCACGG CTAGTTGTCTCAGGA PPA1238 1345622 - 1345182 - | ATP synthase epsilon chain PPA1239 1347082 - 1345628 - | F0F1 ATP synthase subunit beta PPA1240 1348038 - 1347094 - | ATP synthase gamma chain PPA1241 1349679 - 1348042 - | F0F1 ATP synthase subunit alpha PPA1242 1350524 - 1349733 - | ATP synthase delta chain PPA1243 1351075 - 1350521 - | F0F1 ATP synthase subunit B PPA1244 1351307 - 1351086 - | ATP synthase C chain TERM 598 1351261 - 1351240 - G 72 -12.9 -3.06162 | CACGCCACGCCAAGA GCCGGGCCG AGGG CGGCCAGGC CATAGCCGAGCACGT PPA1245 1352174 - 1351398 - | ATP synthase A chain PPA1246 1352425 - 1352171 - | hypothetical protein TERM 599 1352289 - 1352275 - G 75 -2.1 -4.91109 | overlap 1352279 TGCCGACGACAAAAA TCCAC ACTTG ATGGA AGTGGCTTGACAGCA PPA1247 1352958 - 1352464 - | putative cyanate permease TERM 600 1352776 - 1352758 - G 73 -4.4 -4.62069 | overlap 1352759 GCCGCACGCCAAAAA CGCCACCG CCA CGACGGTG CCAGCTAGACCACTG PPA1248 1354218 - 1353115 - | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 601 1353250 - 1353226 - G 71 -7.2 -4.1822 | gap 1 TTCCAGGCCAATAAA CACCGT-CCCA AAGG TGAGCACGGTG GTCCATAGATACATC TERM 602 1353614 - 1353590 - G 81 -4.2 -5.00616 | gap 1, overlap 1353594 TTGTGGGGCAAAAAA CCGAGACAGGC GCCC GCC-GTCGCAG CCGTAATGAGACTGG PPA1249 1355150 - 1354227 - | SUA5 related protein PPA1250 1355958 - 1355083 - | putative methylase PPA1252 1357043 - 1355958 - | peptide chain release factor 1 TERM 603 1357130 - 1357092 - R 100 -18.3 -3.55444 | gap 1, overlap 1357093 1357095 GTTGTACCCCCGAAA CGAGCCATGACGCCGAGC CGCA GCCCGGCGTCATGG-TCA TCGGTATAGACGACG TERM 604 1357129 - 1357093 - R 100 -19.6 -2.73124 | gap 1, overlap 1357092 1357095 TTGTACCCCCGAAAC GAGCCATGACGCCGAGC CGCA GCCCGGCGTCATGG-TC ATCGGTATAGACGAC TERM 605 1357128 - 1357095 - R 100 -18.9 -2.91144 | overlap 1357093 1357092 GTACCCCCGAAACGA GCCATGACGCCGAGC CGCA GCCCGGCGTCATGGT CATCGGTATAGACGA rpmE 1357374 - 1357165 - | 50S ribosomal protein L31 rho 1359391 - 1357490 - | transcription termination factor Rho TERM 606 1359061 - 1359090 + g 78 -7.1 -4.63932 | gap 1, overlap 1359063 GTTTCTGAGCCTCGG CGGCGTCGAGTAGG TCG CCTAC-CGACGGAG TTTTCTTCCCCCCTG PPA1256 1360580 - 1359690 - | homoserine kinase PPA1257 1361661 - 1360591 - | threonine synthase TERM 607 1360816 - 1360803 - G 83 -4.5 -5.06414 | CCGGCTCAACAAAAA TGCCC TCTC GAGCA GCTAGGAAAGTCTGG PPA1258 1362989 - 1361664 - | homoserine dehydrogenase PPA1259 1364490 - 1363060 - | diaminopimelate decarboxylase TERM 608 1364263 - 1364240 - G 73 -5.2 -4.59773 | gap 1, overlap 1364242 TCCCACTCGGAAAAA GC-GTCACGGA AGG CCCGTGCCCGC TGCCGGAGGTCGGAC PPA1260 1364738 - 1366054 + | hypothetical protein TERM 609 1366628 - 1366609 - g 71 -9.2 -3.75718 | overlap 1366605 1366610 GGTAACGAAAATGAA GGGTGCGC CGAT GCGCACCG CCAAGAATATGGATC TERM 610 1366627 - 1366610 - g 70 -12.7 -2.84708 | overlap 1366609 1366605 GTAACGAAAATGAAG GGTGCGC CGAT GCGCACC GCCAAGAATATGGAT kgd 1366241 - 1369951 + | alpha-ketoglutarate decarboxylase PPA1262 1370000 - 1370194 + | hypothetical protein PPA1263 1370647 - 1370249 - | hypothetical protein PPA1264 1370755 - 1371180 + | transcription factor WhiB3 PPA1265 1372685 - 1371210 - | sensory transduction histidine kinase TERM 611 1372981 - 1372957 - R 100 -22.9 -3.25823 | opp_overlap 1372957 GGTTTGGGATAGTAA GGCCCCGTCCC CTA GGGACGGGGCC TTACTCGTCGTGCTG TERM 612 1372957 - 1372981 + r 100 -22.9 -3.23692 | opp_overlap 1372957 GGTTTGGGATAGTAA GGCCCCGTCCC CTA GGGACGGGGCC TTACTCGTCGTGCTG PPA2382 1373294 - 1373028 - | putative anti-sigma factor TERM 613 1373096 - 1373111 + g 70 -10.4 -3.55444 | opp_overlap 1373089 GCATAGGAGCTGCCA CGGTGC GGTT GCACCG TTTGAGAGCTCGAGA PPA1266 1373968 - 1373291 - | RNA polymerase sigma factor RpoE TERM 614 1373876 - 1373913 + g 71 -5.5 -4.43213 | gap 1, opp_overlap 1373876, overlap 1373877 1373879 GAGCTGGTCAAGGTA TTC-GAGGGCGTCACGCT CGA AACGTTGCGCCCTCTGGG TTTTCGTCTCTTCAG PPA1267 1373997 - 1374818 + | hypothetical protein PPA1268 1374808 - 1376097 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 615 1376082 - 1376112 + F 74 -11.2 -3.63068 | overlap 1376079 GATGTGGGCCAACCT CGTCGAGGAGGT TTGACGT GTCTCCTCGACG TTTAGCCTCCTCTGG PPA1269 1376099 - 1377100 + | putative GTPase PPA1270 1378331 - 1377519 - | carboxypeptidase-related protein PPA1271 1378433 - 1379326 + | putative inositol monophosphatase PPA1272 1380623 - 1379370 - | D-3-phosphoglycerate dehydrogenase TERM 616 1380373 - 1380349 - G 80 -4.1 -5.0916 | opp_overlap 1380349, overlap 1380343 GTGCCAATACAAAAA GCGCCAACCGC ATG GAGCTTGTCGC CGCAGGCCTCAACGA PPA1273 1381392 - 1380607 - | dipeptide ABC transporter ATP-binding PPA1274 1382201 - 1381392 - | putative ATP-binding ABC transporter protein PPA1275 1383013 - 1382201 - | permease protein of oligopeptide ABC transporter PPA1276 1383987 - 1383010 - | ABC transporter permease protein PPA1277 1385471 - 1383984 - | ABC transporter, substrate binding protein TERM 617 1385746 - 1385773 + H 100 -12 -4.82901 | GTCCCCGCTACCAGT TCCCCGTCAGCT TCAG GGTTGGCGGGGA TTTTTCTACCCCGCG TERM 618 1386536 - 1386550 + G 80 -10 -4.13246 | AGCACGACGCGGACC GAAGCC GGG GGCTTC TTTGTGTCTGGAGTC PPA2384 1386164 - 1386718 + | hypothetical protein TERM 619 1387562 - 1387578 + G 83 -2.9 -5.28176 | overlap 1387561 ACGCCTGTCTTGCTG CGGCG ATTGCGG TGCCG TTTTTTGTACATCAC PPA2383 1387357 - 1387752 + | hypothetical protein PPA1278 1388511 - 1388098 - | hypothetical protein TERM 620 1388692 - 1388656 - R 100 -23.1 -3.21099 | opp_overlap 1388651 CTTCCTTATCACCAA CGAGACCGGCGACGCAC CTA GTACGTCGCCAGCCTCG TACCCTATGTCTCGT PPA1279 1388969 - 1388712 - | hypothetical protein PPA1280 1389631 - 1388966 - | plasmid partition protein ParA TERM 621 1389869 - 1389839 - R 100 -17 -4.0641 | opp_overlap 1389839 CTGCACTCACAGAAA CCCCTCCTGAAC TGGACTT GTTCAGGAGGGG TTTTGTCTTGCCATG TERM 622 1389839 - 1389869 + r 100 -17 -4.67608 | opp_overlap 1389839 CTGCACTCACAGAAA CCCCTCCTGAAC TGGACTT GTTCAGGAGGGG TTTTGTCTTGCCATG TERM 623 1389899 - 1389914 + r 72 -4.6 -4.63527 | GCGCCTAGACCAAGG CTGCGG GTCA CCTCAG TTTTTCAGCTGCTGC PPA1281 1390727 - 1389906 - | hypothetical protein PPA1282 1390884 - 1391147 + | hypothetical protein PPA1283 1391379 - 1391140 - | hypothetical protein PPA1284 1393247 - 1392027 - | hypothetical protein PPA1285 1395143 - 1393836 - | putative biotin carboxylase TERM 624 1394380 - 1394398 + g 79 -8.2 -4.50988 | opp_overlap 1394378 1394379, overlap 1394378 1394381 TGGATATGACCAATT TCAACGAA ATC TTCGTTGG TTGTTTTTGCTGTGG TERM 625 1395034 - 1395046 + g 71 -7.7 -4.08767 | TGGCGCTTCTGGCAC GCTTC ATA GAAGC TTTTAAACCAATGCG PPA1286 1395843 - 1395130 - | putative thioesterase PPA1287 1397579 - 1395840 - | non-ribosomal peptide synthetase TERM 626 1396910 - 1396898 - G 70 -4.8 -4.57073 | overlap 1396899 GAGGTGTCGTAAAAA GGTG GGTAG CACC ACTAGACGCAAGTCG PPA1288 1400898 - 1397602 - | surfactin synthetase subunit 1 TERM 627 1398096 - 1398107 + g 70 -4.4 -4.49311 | TGTTAAGCATCAGAG TTGG GACG CCAA TTTTATACTCATCGT TERM 628 1398348 - 1398363 + g 71 -7.6 -4.08692 | overlap 1398357 ATGGGAAACATGATT TCACTC CATC GAGTGA TTTTGACCAAAATTC TERM 629 1399812 - 1399800 - G 80 -3.3 -5.15167 | opp_overlap 1399806 GACCAGCAACAAAAA GCTCA CCT TGCGC TCCAGGAGGAACTGG PPA1289 1401895 - 1400906 - | cysteine synthase/ornithine cyclodeaminase PPA1290 1402897 - 1401896 - | cystathionine beta-synthase TERM 630 1402048 - 1402059 + g 70 -4.4 -4.52589 | opp_overlap 1402042 TAATGACAACGCGGC TTCC CTCG GGAA TTTTATCTCGAAGAG TERM 631 1403500 - 1403545 + G 76 -6.1 -4.65895 | gap 1, overlap 1403501 ATCCTGTAGGCGTAG ACGT-CGAGGCAGTCGCTGAGC CAG GTTTAGCGGTGGTCTCGAACGA TTTTTCAGTGGAAGA PPA1291 1403184 - 1403912 + | biosurfactants production protein PPA1292 1404700 - 1404008 - | putative transcriptional regulator PPA1293 1406422 - 1405625 - | putative ribonuclease E PPA1294 1408121 - 1406415 - | hypothetical protein TERM 632 1406555 - 1406595 + g 85 -15.4 -3.25223 | CGTCCTTGCCGTCAT CGCCGCCCCCCTGGGC-CAC AGG GAGCGCCCAGGGGGGCA-CG TTGCTGGTGTAGATG PPA1295 1408639 - 1408118 - | hypothetical protein PPA1296 1409308 - 1408709 - | putative permease PPA1297 1410051 - 1409266 - | hypothetical protein PPA1298 1409552 - 1410157 + | hypothetical protein PPA1299 1410174 - 1410755 + | hypothetical protein TERM 633 1411143 - 1411090 - g 78 -13.3 -3.2281 | gap 2, opp_overlap 1411120 1411121, overlap 1411093 1411111 AAACCACCAAGCCAA CCAGCTGCGCGTCGCCGAGAACATC CTCACC GACATCCTCGGCGACGC-C-GCCGA CGCTGGCCTTTCCGT TERM 634 1411140 - 1411093 - g 73 -13.6 -2.79684 | gap 2, opp_overlap 1411120 1411121, overlap 1411090 1411111 CCACCAAGCCAACCA GCTGCGCGTCGCCGAGAACATC CTCACC GACATCCTCGGCGACGC-C-GC CGACGCTGGCCTTTC PPA1300 1410818 - 1411315 + | hypothetical protein PPA1301 1411519 - 1412097 + | hypothetical protein TERM 635 1412119 - 1412107 - T 74 -7.7 -4.20516 | CGGTGATTTAAGAAA GATGC TCC GCATC AAGTCGTTTGAGTCA PPA1303 1412353 - 1412132 - | hypothetical protein PPA1304 1412951 - 1412439 - | hypothetical protein PPA1305 1413304 - 1413666 + | hypothetical protein TERM 636 1413731 - 1413783 + TF 100 -16.3 -3.72632 | gap 2, overlap 1413734 ATTCCGCTGTCCCTT AC-TCGCTG-AGGCGGTGGCGCGGC AGCCG GCCGCGCCACCGCCTTCACCGTTGG TTCTTACGTCTCTGT TERM 637 1413734 - 1413779 + TF 100 -27 -3.55304 | gap 1, overlap 1413731 CCGCTGTCCCTTACT CGCTG-AGGCGGTGGCGCGGC AGCCG GCCGCGCCACCGCCTTCACCG TTGGTTCTTACGTCT PPA1306 1413989 - 1413774 - | hypothetical protein PPA1307 1413971 - 1414564 + | hypothetical protein PPA1308 1415436 - 1414846 - | putative universal stress protein UspA PPA1309 1416049 - 1415507 - | hypothetical protein TERM 638 1415869 - 1415893 + g 70 -10.8 -3.54424 | gap 1 GGCTACCGATGGCAA GCTGA-CCAGC CAGC GCTGGCTCAGC TTTCACAAGATCGAC TERM 639 1416083 - 1416101 + r 70 -4.4 -4.42386 | overlap 1416084 CAACAATGCGGTATT CCCGTTCC CCC GGCACGGA TTTTCTGGATAGCAG PPA1310 1417245 - 1416067 - | protease PPA1311 1417302 - 1418663 + | hypothetical protein PPA1312 1419319 - 1418651 - | metal-dependent hydrolase TERM 640 1418765 - 1418742 - G 70 -4.5 -4.45517 | gap 1 AAACCAGTCAGAAAA CCCT-CCGCC CGTTC GGCGTTAGGG AACCCGGCGAGCAAT TERM 641 1419371 - 1419420 + rH 100 -12.4 -4.6645 | gap 2 CTAGATTGACGTTAG CCTCCGGATC-TCA-GATGTGC AGGGGAAG GCACATCGTGATGGTCCGGGGG TTTTATGTATCTGTA PPA1314 1422428 - 1420308 - | putative DNA helicase II-like protein PPA1313 1419406 - 1420362 + | hypothetical protein TERM 642 1424886 - 1424912 + G 70 -4.3 -4.46212 | gap 1, opp_overlap 1424874 ATACTGGATACGTTC CCG-GATCCTGG CTGA CCTGGAACACGG TTTTCTGCTAGACGA PPA1315 1422553 - 1425702 + | exodeoxyribonuclease V gamma chain TERM 643 1426233 - 1426218 - g 70 -4.6 -4.57569 | opp_overlap 1426206 1426229, overlap 1426220 TCAGTGCGCGAAAAA CGCGAG CTAT CTCGAG ATGTCGCGGTGAAAT TERM 644 1427395 - 1427381 - g 71 -5.6 -4.37886 | overlap 1427383 TCAGGTGGCACAAAA GGCGCA TAT TGCGGC CTGTGAAGGAAGGTT PPA1316 1425699 - 1428935 + | exodeoxyribonuclease V beta chain PPA1317 1428928 - 1430814 + | exonuclease V, alpha chain PPA1318 1431597 - 1430845 - | NADH pyrophosphatase TERM 645 1431015 - 1431002 - G 74 -6.7 -4.37886 | TGACGGCTGAGAAAA CTAGC CTCC GCTAG CTCGTCGTGGCCGAC PPA1319 1435006 - 1431788 - | putative ATP-dependent DNA helicase PPA1320 1438188 - 1435003 - | putative ATP-dependent DNA helicase PPA1321 1438433 - 1438257 - | hypothetical protein TERM 646 1438331 - 1438293 - G 74 -3.1 -4.8048 | gap 1, overlap 1438295 CTGCGATATGAAAAA GTGGAGTTGTTGCCTCAT ACGG ATGAGGC-ACATCCGCGC GCCGAATAGCTCACT PPA1322 1438455 - 1439231 + | protein phosphatase PPA1323 1439333 - 1439560 + | putative ATP-binding protein PPA1324 1440167 - 1439601 - | hypothetical protein TERM 647 1441706 - 1441690 - g 74 -6.5 -4.30719 | overlap 1441672 1441671 1441691 GCTTCCGAGAAGAAA CGGCGAC AGC ATCGCCA CGGCCATGATGGCTC PPA1325 1440298 - 1441983 + | putative ATP-dependent RNA helicase TERM 648 1442095 - 1442059 - f 75 -5.8 -4.70169 | gap 1, opp_overlap 1442058, overlap 1442060 1442061 CTACACTGAACAAAA TGCGCGGCGT-TTCCGG TTCA CCGGAACACCACGTGCA GCTTAATCAGTCGTA TERM 649 1443231 - 1443259 + G 74 -7.4 -4.30576 | gap 1, opp_overlap 1443227 CCGATTCAAGACACC CGCCGGTGG-CAT CCTC ATGACCGCCAGCG TTTTCCTACTGGGGG PPA1326 1442125 - 1443633 + | L-asparagine permease PPA1327 1444788 - 1443697 - | tryptophanyl-tRNA synthetase PPA1328 1445793 - 1444933 - | metal-dependent phosphoesterase PPA1329 1450409 - 1445790 - | NAD-glutamate dehydrogenase PPA1330 1450552 - 1451025 + | hypothetical protein PPA1331 1451555 - 1451058 - | hypothetical protein PPA1332 1451445 - 1452260 + | hypothetical protein TERM 650 1452297 - 1452264 - TR 100 -18.2 -3.40403 | opp_overlap 1452289 1452293 GGGCTGGGATGATAA CGACGGCGCCAGCC ACGTGG AACTGGCGCCGTCG ACCACTCACCGACGC PPA1333 1455008 - 1452303 - | preprotein translocase subunit SecA TERM 651 1455183 - 1455145 - R 73 -12.4 -3.16881 | overlap 1455147 GATCTACCTCATGAA CACGCGGTGCCGGCAT CTCCGCC ATGCCGGCACCGGAAG CCACAGAGAGTCAAT TERM 652 1455180 - 1455147 - R 83 -14.7 -3.14602 | gap 1, overlap 1455145 TCTACCTCATGAACA CGCGGTGCCGGCAT CTCCGCC ATGCCGGCACCG-G AAGCCACAGAGAGTC TERM 653 1455244 - 1455215 - R 100 -25.1 -3.52341 | ACCCCAACATGACAA GCGGCGATGCGGG AAGA CCCGCATCGCCGC GACCTCGAAACTTCA PPA1334 1455935 - 1455267 - | putative ribosomal S30AE, sigma 54 modulation protein TERM 654 1455584 - 1455565 - G 70 -10.7 -3.54 | opp_overlap 1455578, overlap 1455563 AGGACCTGAGAAACA CGCAGCC CGCGGC GGCTGCG ACGACGATCCGCAGC PPA1335 1456744 - 1456097 - | putative amidophosphoribosyltransferase PPA1336 1458561 - 1456786 - | membrane spanning lipoprotein TERM 655 1457882 - 1457833 - G 74 -12.1 -3.13164 | gap 1, overlap 1457838 CGCCGAAGCACTCAA CGG-AACGGTGACCACACCGACGG CAT CCACCGACGTCGTCCCCGTCACCG TCACCCCGTCCGGCA PPA1337 1460306 - 1458558 - | signal transduction histidine kinase PPA1338 1460863 - 1460153 - | putative response regulator PPA1339 1461506 - 1460928 - | hypothetical protein TERM 656 1461485 - 1461431 - G 74 -7.3 -4.38712 | overlap 1461433 CGGACTCGTAGAAAA TACCCTCGTCAATTT-GGCGACTTGCC ACA AGCAAGTCACCGACCTTGA-GAGGGTT CGCGAGTATCACGAG TERM 657 1461483 - 1461433 - G 76 -9.9 -3.80133 | overlap 1461431 GACTCGTAGAAAATA CCCTCGTCAATTT-GGCGACTTGCC ACA AGCAAGTCACCGACCTTGA-GAGGG TTCGCGAGTATCACG TERM 658 1461967 - 1461934 - R 100 -19.7 -3.36749 | GACTGTGAACACGAA CATGGGCCCACCCCT CAAG AGGAATGGGCCCATG CCGTAAATGATTTCG PPA1340 1462863 - 1462006 - | cAMP factor TERM 659 1462833 - 1462805 - G 76 -8.8 -4.03234 | GTCGCTCCAGAGAAA GCTGCCGGCGCC ATCAA GGCACCAACAAC CAGCGGCGCTGCTAA PPA2385 1462890 - 1463321 + | hypothetical protein PPA2386 1463260 - 1463646 + | hypothetical protein PPA2387 1463646 - 1463927 + | hypothetical protein PPA1341 1464560 - 1464348 - | hypothetical protein TERM 660 1465572 - 1465557 - g 73 -4.6 -4.63218 | overlap 1465558 GGGCGGCCAAGAAAA CCCGCA CCTA CGCGAG GATCCTCGCACGCTA PPA1342 1465049 - 1465588 + | hypothetical protein TERM 661 1466023 - 1465978 - f 71 -12.8 -2.59431 | gap 3, opp_overlap 1465974 1465973, overlap 1465974 TGCTCGCACAACGGA TGAGC-C-G-TGGCGTGAGCGTC CCG GACGCTCACGCCAGCGGTGGTCA TAACGCTTGTTAATT TERM 662 1466402 - 1466368 - g 71 -7.8 -4.07877 | CGATCGTAGAAATAA TTCCGCCCAGTCACCA CGA CAACAACTGGGCGGCA AGTCATCGCAACGAA PPA2388 1466262 - 1466522 + | hypothetical protein PPA2389 1466728 - 1467237 + | hypothetical protein TERM 663 1467539 - 1467513 - T 72 -4.5 -4.70046 | gap 1 GACAAAATGAGAAAA TGCTG-ACTCCG GCTG CAGAGTTCAACA CTCCCCTCTAGTGGA PPA1344 1468549 - 1467947 - | hypothetical protein TERM 664 1468023 - 1468001 - G 73 -4.9 -4.68593 | gap 1 TCCATCATCGAAAAA TCTCAGCGGG ATCA CCCG-TAAGA GGGGGTTCGTCCACT PPA1345 1469172 - 1468648 - | hypothetical protein PPA1346 1470629 - 1469169 - | argininosuccinate lyase TERM 665 1469222 - 1469194 - G 79 -12.4 -3.53012 | opp_overlap 1469188 1469185 TCGGCCTCTCCGAAA CTGCGCAAGCCC GCAAT GGCCTCGCGCAG CTCGGTGATCTGCTC PPA1347 1471913 - 1470717 - | acetylornithine aminotransferase TERM 666 1471722 - 1471674 - G 81 -4.6 -5.00616 | gap 2, overlap 1471676 CCCCGTGGTAAAAAA GTTCGAGAC-ATGAGCCA-GTGTC TCT GACTGATGGCTCACAGCCTCGACC CACGCTGGATGGGCA PPA1348 1472856 - 1471924 - | acetylglutamate kinase argJ 1473662 - 1472853 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PPA1350 1474798 - 1473674 - | N-acetyl-gamma-glutamyl-phosphate reductase smpB 1475310 - 1474828 - | SsrA-binding protein PPA1352 1476258 - 1475356 - | cell division protein PPA1353 1476978 - 1476292 - | cell division ATP-binding protein TERM 667 1476537 - 1476524 - G 73 -4.5 -4.63218 | opp_overlap 1476532 GGGCGGTTAACAAAA GCCCT AGCC AGAGC GACGCGCTGTTGCTC prfB 1478096 - 1476990 - | peptide chain release factor 2 PPA1355 1478410 - 1479120 + | hypothetical protein PPA1356 1481782 - 1479182 - | FtsK/SpoIIIE protein TERM 668 1481633 - 1481661 + g 100 -14.5 -4.95167 | GGACGCGCTGGAGGG CGTCGACCTGCTC CGC GAGCTGGCCGACG TTTTCTTGTTGCTTC PPA1357 1482835 - 1481873 - | thiamine monophosphate kinase PPA1358 1482878 - 1483333 + | hypothetical protein PPA1359 1484443 - 1483346 - | D-alanine--D-alanine ligase TERM 669 1484184 - 1484203 + g 70 -10 -3.53012 | opp_overlap 1484166 TCGGTATCGACGATG CAGGTGCC CTCG GGCATCTG TTTGACCGACACCAG PPA1360 1485268 - 1484492 - | putative acyltransferase PPA1361 1485763 - 1485368 - | 3-isopropylmalate dehydratase small subunit fragment PPA1362 1486176 - 1485769 - | 3-isopropylmalate dehydratase large subunit fragment PPA1363 1486539 - 1486204 - | 3-isopropylmalate dehydratase large subunit fragment PPA1364 1486763 - 1487482 + | putative transcriptional regulator PPA1365 1488927 - 1487983 - | hypothetical protein PPA1366 1489727 - 1488927 - | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase deoA 1489808 - 1491097 + | thymidine phosphorylase PPA1368 1492228 - 1491137 - | branched-chain amino acid aminotransferase PPA1371 1493176 - 1493754 + | putative transferase TERM 670 1493804 - 1493774 - T 95 -17.6 -3.6336 | GCAGAGGATACAGAA TTGAGGGCCCGCGG TAC CTACGGGCCCTCAA CGTCAGGCCAGCAGG PPA1372 1494849 - 1493821 - | ketol-acid reductoisomerase PPA1373 1495271 - 1495026 - | acetolactate synthase small subunit fragment PPA1374 1495549 - 1495322 - | acetolactate synthase large subunit fragment PPA1375 1496367 - 1495957 - | putative cell-cycle regulation histidine triad protein TERM 671 1496381 - 1496358 - G 74 -5.4 -4.4767 | gap 1 CGATTGAGCAGAAAA GGCAGTCCATA AGT TATG-ACTACC ACATCGGCTAGGCGT PPA1376 1497167 - 1496412 - | imidazole glycerol phosphate synthase subunit HisF TERM 672 1496509 - 1496486 - G 95 -11 -4.70659 | overlap 1496487 1496488 1496490 TGTGATAGTGAAAAA CTGACGCGGC GAGC ACCGCGTCAA CTCCGGCGCGCGCCG TERM 673 1496508 - 1496487 - G 79 -12.3 -3.41913 | overlap 1496486 1496488 1496490 GTGATAGTGAAAAAC TGACGCGGC GAGC ACCGCGTCA ACTCCGGCGCGCGCC TERM 674 1496528 - 1496488 - G 72 -13.2 -2.64666 | overlap 1496487 1496486 1496490 TGATAGTGAAAAACT GACGCGGCGAGCACCG CGTCAACTC CGGCGCGCGCCGCCTC GACGAAATCGGCAAC PPA1377 1499976 - 1497223 - | superfamily II RNA helicase PPA1378 1500943 - 1500158 - | Sec-independent protein translocase protein TatC-like protein PPA1379 1501294 - 1501031 - | hypothetical protein PPA1380 1501562 - 1501359 - | hypothetical protein PPA1381 1502530 - 1501562 - | regulatory protein PPA1382 1503489 - 1502527 - | DeoR family transcriptional regulator PPA1383 1503535 - 1504578 + | glutamyl-tRNA synthetase PPA1384 1505745 - 1504621 - | putative peptidyl-prolyl cis-trans isomerase TERM 675 1505098 - 1505082 - GT 75 -2.2 -4.91109 | TGTCGACGACAAAAA TAAGGG AGTCA CCCTTC ATGATGCCAGCTTGC PPA1385 1506442 - 1505705 - | ribosomal large subunit pseudouridine synthase B PPA1386 1506825 - 1506460 - | hypothetical protein PPA1387 1507757 - 1506810 - | chromosome partitioning protein xerD 1508739 - 1507819 - | site-specific tyrosine recombinase XerD TERM 676 1508527 - 1508513 - G 77 -11.4 -3.60214 | ACTGCAACCACACAA CGCGTC ACA GACGCG GGGGCCAGGCCAATG PPA1389 1509395 - 1508736 - | putative ADP-ribose pyrophosphatase PPA1390 1511080 - 1509392 - | CTP synthetase PPA1391 1511462 - 1511253 - | hypothetical protein PPA1392 1511672 - 1511466 - | hypothetical protein PPA1393 1511830 - 1511609 - | hypothetical protein PPA1394 1513525 - 1511846 - | DNA repair protein RecN ppnK 1514478 - 1513522 - | inorganic polyphosphate/ATP-NAD kinase PPA1396 1515273 - 1514497 - | putative cytotoxin/hemolysin PPA1397 1515440 - 1515285 - | hypothetical protein PPA1398 1516176 - 1515544 - | cobalt permease or related transporter TERM 677 1515786 - 1515772 - G 72 -12.8 -3.09635 | AGGTTTAGCACCCAA CGGCCG CAG CGGCCG AGCCAAGGCCACAAT PPA1399 1517123 - 1516173 - | ABC-type transporter, ATPase component TERM 678 1516816 - 1516775 - GR 93 -17.3 -3.32268 | gap 1 TAACGAGTCTGAGAA GGGTCGAC-TTGCCGGCCCC ATT GGGGCCGATAACGGCGACCC TACGCTCCGACACAA PPA1400 1517491 - 1516922 - | BioY family protein PPA1401 1518560 - 1517562 - | putative hydrolase PPA1402 1519735 - 1518557 - | hypothetical protein TERM 679 1519940 - 1519924 - R 74 -7.9 -4.24342 | GGGTCCATCAACAAA CCGCACG TCT CTTGCGG GAAATCTTGGGTAAG TERM 680 1521647 - 1521658 + r 70 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTGGTAAACAGT TERM 681 1523852 - 1523838 - R 100 -8.6 -4.87665 | TTCCACTCACAAAAA CTCCTT AGA AAGGAG GTGATCCAGCCGCAC PPA1403 1525851 - 1525654 - | hypothetical protein TERM 682 1525967 - 1525931 - R 100 -19.4 -4.52589 | overlap 1525932 TGCGGGTACACAAAA TCGTCCGGGGACCGCC CAACT AGCGGCCCCCGGACGG ATCATGATCAGGACA TERM 683 1525966 - 1525932 - R 100 -22.9 -3.31232 | overlap 1525931 GCGGGTACACAAAAT CGTCCGGGGACCGCC CAACT AGCGGCCCCCGGACG GATCATGATCAGGAC PPA1404 1527241 - 1525985 - | tyrosyl-tRNA synthetase PPA1405 1527873 - 1527325 - | arginine repressor PPA1406 1528580 - 1527969 - | tetracycline repressor protein TERM 684 1528012 - 1528001 - G 81 -5.8 -4.83615 | overlap 1527988 GACCGGCGACAAAAA TGGC CAGG GCCA GGTCAAAATCGTCAT PPA1407 1528593 - 1529759 + | biotin synthase PPA1408 1532520 - 1530001 - | phenylalanyl-tRNA synthetase beta chain pheS 1533626 - 1532517 - | phenylalanyl-tRNA synthetase subunit alpha PPA1410 1534570 - 1533749 - | putative rRNA methylase TERM 685 1534480 - 1534454 - G 76 -10 -3.72027 | ACCTTCTACCAAGAA CAGCCCGGACTC ATC GCGTCCGCGCCG AGATGAAAGACGACG rplT 1534943 - 1534572 - | 50S ribosomal protein L20 rpmI 1535253 - 1535047 - | 50S ribosomal protein L35 infC 1536160 - 1535354 - | translation initiation factor IF-3 TERM 686 1536140 - 1536111 - G 89 -10.7 -4.53303 | overlap 1536114 GATCCGGATACAAAA TAAGGCCCTCGCG AATG CGCGAAGACCTGA CACGTGGGATGTACA TERM 687 1536137 - 1536114 - G 100 -12.4 -4.38141 | overlap 1536111 CCGGATACAAAATAA GGCCCTCGCG AATG CGCGAAGACC TGACACGTGGGATGT PPA1415 1536822 - 1536349 - | hypothetical protein PPA1416 1536889 - 1537506 + | hypothetical protein hisG 1538422 - 1537568 - | ATP phosphoribosyltransferase hisE 1538746 - 1538480 - | phosphoribosyl-ATP pyrophosphatase PPA1419 1539493 - 1538813 - | nicotinamide mononucleotide transporter PPA1420 1540347 - 1539553 - | hypothetical protein PPA1421 1540931 - 1540350 - | hypothetical protein PPA1422 1541134 - 1542108 + | putative oxidoreductase PPA1423 1543430 - 1542120 - | citrate synthase TERM 688 1542681 - 1542659 - G 75 -7.6 -4.16681 | AACACGACGTGAAAA GGTTGGCACC CGA GGACCCAACC ATCCGCACTGTCGAG PPA1424 1544794 - 1543430 - | hypothetical protein TERM 689 1544232 - 1544214 - G 72 -3 -4.8622 | GTCGTCAAGGAAAAA CCACCGAC CTC GCTGATGG CTTCGGTGACGCCGT TERM 690 1545030 - 1545061 + H 100 -20.2 -4.92756 | overlap 1545032 GGACACCCCGGGATT GCTCCCCGGCCAAG GTTT CTTGGCCGGGGACC TTTGTTTTTAGTCGT TERM 691 1545032 - 1545059 + H 100 -21.4 -2.71331 | overlap 1545030 ACACCCCGGGATTGC TCCCCGGCCAAG GTTT CTTGGCCGGGGA CCTTTGTTTTTAGTC PPA1425 1545599 - 1546732 + | putative lysophospholipase TERM 692 1546756 - 1546794 + F 95 -18.3 -2.65264 | gap 1, overlap 1546758 GTCCTGATTCCGCCT GAGGTTGCGT-CCCGCGA TGAG TCGAGGGGACGCAACCTC TGCTGTCCCTCATCG TERM 693 1546758 - 1546792 + F 84 -15.1 -2.86728 | gap 1, overlap 1546756 CCTGATTCCGCCTGA GGTTGCGT-CCCGCGA TGAG TCGAGGGGACGCAACC TCTGCTGTCCCTCAT PPA1427 1546949 - 1547164 + | CsbD-like protein TERM 694 1547199 - 1547168 - f 82 -13.7 -3.32294 | gap 1, opp_overlap 1547170 1547171, overlap 1547169 CTAAAGGGTTGATAA TGTCGGGCCGGGCA TCAGG TGCCCGGCCCG-CT TCCTGCTATGACAGC TERM 695 1547198 - 1547169 - f 85 -17.2 -2.59055 | gap 1, opp_overlap 1547170 1547171, overlap 1547168 TAAAGGGTTGATAAT GTCGGGCCGGGCA TCAGG TGCCCGGCCCG-C TTCCTGCTATGACAG TERM 696 1547170 - 1547198 + F 100 -18.1 -3.24747 | opp_overlap 1547169 1547168, overlap 1547171 AAAGGGTTGATAATG TCGGGCCGGGCAT CAG GTGCCCGGCCCGC TTCCTGCTATGACAG TERM 697 1547171 - 1547197 + F 100 -21.6 -2.54634 | opp_overlap 1547169 1547168, overlap 1547170 AAGGGTTGATAATGT CGGGCCGGGCAT CAG GTGCCCGGCCCG CTTCCTGCTATGACA PPA1428 1547186 - 1547713 + | methylated-DNA--protein-cysteine methyltransferase PPA1429 1548821 - 1547688 - | DNA processing / uptake protein PPA1430 1550290 - 1548818 - | competence related protein (magnesium chelatase, ATPase) TERM 698 1549976 - 1549947 - G 76 -14.9 -2.64155 | overlap 1549944 1549943 GCCCGCTCAAACCCA GCCTCCCGCGCCG CTAG CAGCGCGGGCAGC ACGCCGCGCACAGGC PPA1431 1550760 - 1550338 - | hypothetical protein PPA1432 1551336 - 1551025 - | hypothetical protein rnhB 1551947 - 1551333 - | ribonuclease HII PPA1434 1552807 - 1551983 - | signal peptidase I TERM 699 1552580 - 1552592 + g 75 -7.7 -4.19704 | GATCACGCGGTCGCC CACCT GCA AGGTG TTTTGCATAGACTTC TERM 700 1552966 - 1552929 - R 77 -13.5 -2.91274 | opp_overlap 1552935, overlap 1552935 GTGAGTGGAACCATA CAAAAACGGGGCTTCGC CGTA ACGAAACCCCGTTGCTG TTAAGACGACGTCAG TERM 701 1552960 - 1552935 - R 100 -13.3 -5.04175 | opp_overlap 1552935, overlap 1552929 GGAACCATACAAAAA CGGGGCTTCGC CGTA ACGAAACCCCG TTGCTGTTAAGACGA rplS 1553331 - 1552978 - | 50S ribosomal protein L19 TERM 702 1553557 - 1553524 - R 100 -24.7 -3.7511 | overlap 1553525 TGCTCCACAACATAA CCGGGCTCCGACACC GCGA GGTGTCGGAGCCCGA GTAATCGACCACACG TERM 703 1553556 - 1553525 - R 100 -26 -2.84745 | overlap 1553524 GCTCCACAACATAAC CGGGCTCCGACACC GCGA GGTGTCGGAGCCCG AGTAATCGACCACAC PPA1437 1554355 - 1553582 - | succinate dehydrogenase/fumarate reductase iron-sulfur subunit sdhA 1556379 - 1554352 - | succinate dehydrogenase flavoprotein subunit PPA1439 1557113 - 1556379 - | succinate dehydrogenase cytochrome B-558 subunit TERM 704 1557166 - 1557183 + r 78 -7.7 -4.46404 | overlap 1557178 1557181 GAAAACTTCCCTCGA CCCTTGG TTCA CTAAGGG TTTTACTCTTGATTA TERM 705 1557209 - 1557219 + r 72 -5.4 -4.4715 | GATTATCGCAACATT TTCG GTT CGAA TTTTGTCGATTAGAG PPA1440 1557959 - 1557240 - | tRNA (guanine-N(1)-)-methyltransferase PPA1441 1558501 - 1557962 - | 16S rRNA processing protein RimM TERM 706 1558592 - 1558547 - R 74 -12.5 -3.00766 | opp_overlap 1558550 1558552, overlap 1558552 AAGATGCCAGACACA GCACATGGGCCGCAGCCCCGC CAGA GCGGAACCACGGCCCATATTG TCAAAGGACTGGCGA TERM 707 1558587 - 1558552 - R 100 -19 -2.90797 | opp_overlap 1558552 1558550, overlap 1558547 GCCAGACACAGCACA TGGGCCGCAGCCCCGC CAGA GCGGAACCACGGCCCA TATTGTCAAAGGACT PPA1442 1558887 - 1558609 - | hypothetical protein PPA1443 1559333 - 1558890 - | 30S ribosomal protein S16 PPA1444 1560687 - 1559524 - | amidohydrolase family protein TERM 708 1559937 - 1559921 - G 71 -9.4 -3.78022 | overlap 1559931 TCGATATTGATCAAA GTCGGG ACAAG CCCGAC CTCGCGCTCAGCCAT PPA1445 1562350 - 1560764 - | signal recognition particle protein TERM 709 1560891 - 1560907 + g 84 -9.3 -4.43877 | AACCCGAACGCCTCA CCGCTGC TCC GCTGCGG TTTCTTTGCAGCTTG PPA1446 1563607 - 1562426 - | membrane-associated protein PPA1447 1564808 - 1563618 - | signal recognition particle receptor TERM 710 1564898 - 1564841 - R 76 -6.9 -4.4715 | gap 1, opp_overlap 1564857 GGTCAATTCACAAAA CCACGAGGGCAGACCGCCTCAGCGATGT CGA ACACCGCTGAGATCTTC-ACCCACACGG GTGGCGGTGTGACGC PPA1448 1565745 - 1565086 - | GtrA-like protein PPA1449 1566351 - 1566692 + | HicB family protein PPA1450 1566814 - 1567065 + | hypothetical protein PPA1451 1567859 - 1567089 - | formamidopyrimidine-DNA glycosylase rnc 1568592 - 1567852 - | ribonuclease III TERM 711 1568525 - 1568486 - G 87 -17.3 -3.05844 | TGCGTCAGCGCAAGA TCGAGGAGCTGGGGATC ACACCG GATTCCCAACTCCTCGA GAAGGGCGAGAAAAG PPA1453 1569418 - 1568858 - | metal-binding protein TERM 712 1569997 - 1569973 - g 78 -10.7 -3.99324 | opp_overlap 1569974, overlap 1569974 GGCTATGAGGAGAAA GTCCAGCAGCA AGC CACCGCTGGAC AGCTGCCGGATGTCA PPA1454 1569457 - 1570992 + | solute-binding protein of transport system PPA1455 1571072 - 1572028 + | transport system permease PPA1456 1572025 - 1572921 + | transport system permease PPA1457 1573952 - 1572942 - | LacI family transcriptional regulator TERM 713 1573771 - 1573732 - G 87 -9.8 -4.30576 | CCTTCACCAGCAAAA CTGGGATCGTCGCGCGCG ATGA CGAGCCCGACGGCTCCAG CCCGATTGGCCGATA PPA1458 1574255 - 1574043 - | hypothetical protein TERM 714 1576929 - 1576913 - g 73 -5.1 -4.64676 | opp_overlap 1576913 1576927 CCACGCCGAAGAAAA CGAGGAA GAG TTCATCG TTGATAACGGTCTGC PPA1459 1574904 - 1577987 + | alpha-mannosidase TERM 715 1578968 - 1578956 - g 74 -5.5 -4.55798 | GACGGCAAACCAAAA CCAGA AGC CCTGG CCCTATCAGACATCC PPA1460 1577984 - 1579183 + | hypothetical protein PPA1461 1579263 - 1579460 + | putative short-chain dehydrogenase fragment PPA1462 1579730 - 1579437 - | hypothetical protein PPA1463 1580142 - 1579669 - | phosphopantetheine adenylyltransferase PPA1464 1580747 - 1580139 - | putative methylase TERM 716 1581103 - 1581084 - g 71 -9.2 -3.74361 | CATAGTCACGAACAA CCGCGTCG CCTT CGAGGCGG ACGGCTGGACCGAGG PPA1465 1580884 - 1581306 + | hypothetical protein TERM 717 1581320 - 1581347 + T 90 -17 -3.25282 | opp_overlap 1581312 GAGACTATTTCAGTA GGCCCGGATCGC TCTC GCGGTTCGGGCC TTCATGATGCTTCAT PPA1466 1583659 - 1581410 - | ATP-dependent DNA helicase RecG TERM 718 1583690 - 1583669 - R 100 -15.9 -4.10612 | opp_overlap 1583672, overlap 1583672 ACCCATAACGACAAA GAACCCGCC TTAC GGCGGGTTC CATCGTCAAACGCGG TERM 719 1583672 - 1583687 + r 73 -11.8 -3.09516 | opp_overlap 1583672 1583669 CATAACGACAAAGAA CCCGCC TTAC GGCGGG TTCCATCGTCAAACG TERM 720 1583687 - 1583672 - R 90 -11.8 -4.16837 | opp_overlap 1583672, overlap 1583669 CATAACGACAAAGAA CCCGCC TTAC GGCGGG TTCCATCGTCAAACG PPA1467 1585709 - 1584036 - | metal dependent hydrolase TERM 721 1586154 - 1586120 - R 78 -14.3 -2.56596 | gap 1, overlap 1586116 CGTCCCATGAATCGA CGA-GGAGCCGCCACC TTGC GGTGACGGCCCCACCG AGTCGCGACGGTCAG PPA1468 1587905 - 1586166 - | pyruvate dehydrogenase TERM 722 1587957 - 1587942 - R 76 -11.8 -3.35438 | GACGACATGGGACAA GCGGCC GACC GGCCGC ATACCAGCATACGAC PPA1469 1588852 - 1588013 - | hypothetical protein TERM 723 1588613 - 1588640 + g 71 -7 -4.16943 | GGCATCGGCTCCCAC GGACGTCGCAAT AGTC GTTGCAATGTCC TTTTCAGCTCTCGCC PPA1470 1589585 - 1588845 - | dihydrodipicolinate reductase TERM 724 1589055 - 1589083 + g 74 -13.1 -3.25652 | opp_overlap 1589057 1589059, overlap 1589053 GTGAACCCCCTCAAC GACAGCTCCACGG GCT CCGTTGAGCTGAC TCTTCGTTGCGTCCG TERM 725 1589081 - 1589057 - G 77 -14.3 -2.71681 | opp_overlap 1589055 1589053, overlap 1589059 GAACCCCCTCAACGA CAGCTCCACGG GCT CCGTTGAGCTG ACTCTTCGTTGCGTC TERM 726 1589719 - 1589687 - R 100 -27.1 -3.34895 | overlap 1589705 TCCATGCGCAACGAA CGGGCTGCCCCAGCA CAA TGCCGGGGCAGCCCG CAAACGTCAACTCCC PPA1471 1591953 - 1589752 - | polynucleotide phosphorylase/polyadenylase TERM 727 1591725 - 1591702 - G 73 -5.1 -4.58395 | overlap 1591705 CTCACGGCGGAAAAA GGAGCCGGG GATACG CCCGGCGGC ATACATGCGCTCCTC TERM 728 1592253 - 1592230 - R 82 -13.8 -3.19175 | opp_overlap 1592224 TGCGAACATAGCGAA CGGGGCGCCC GTAG GGACACCCCG TCACATATGATCTAG PPA1472 1592537 - 1592274 - | 30S ribosomal protein S15 PPA1474 1593919 - 1592777 - | riboflavin biosynthesis protein RibF (riboflavin kinase) PPA1475 1594844 - 1593825 - | substrate binding component of glycine/betaine transport system TERM 729 1594870 - 1594911 + r 76 -13.1 -3.10641 | gap 1, overlap 1594894 TCGTGTTCATGTGCA TTG-ACTCAGCTCGCCCG CTGCGCC CGGGCGAGCGGAGTGCGA TTGGCTAGTCCGTTG PPA1476 1595741 - 1594875 - | glycine betaine transport system permease protein PPA1477 1597054 - 1595747 - | putative glycine betaine/proline ABC transporter TERM 730 1596755 - 1596733 - G 70 -4 -4.59853 | overlap 1596734 CGAAGTGCTGAAAAA CCATCGAGAC GTG GTCGCGACGC AGCGCCCGTAACTGA TERM 731 1597131 - 1597109 - R 70 -4.7 -4.54047 | overlap 1597097 CCAGGCGACACAAAA CGCCACGGC CTCAC GTCACGGCG ACATCGATCACCGAA TERM 732 1597394 - 1597369 - R 81 -11.9 -3.64703 | overlap 1597370 CGCGCTCTATCCAAA GTGGTGTGACG GCGT CGTCACACCAG CACACATATTGCGCG TERM 733 1597393 - 1597370 - R 83 -15.4 -2.78679 | overlap 1597369 GCGCTCTATCCAAAG TGGTGTGACG GCGT CGTCACACCA GCACACATATTGCGC truB 1598273 - 1597386 - | tRNA pseudouridine synthase B PPA1479 1598652 - 1598326 - | hypothetical protein PPA1480 1598941 - 1598693 - | hypothetical protein PPA1481 1599639 - 1599376 - | hypothetical protein TERM 734 1600269 - 1600291 + G 70 -9.8 -3.55444 | overlap 1600250 CGACGAGTACCCTAT CGACGACGAT ATC GTCGCCGTCG TTTCCCGGATCACCG TERM 735 1601327 - 1601309 - g 76 -13.2 -3.06796 | opp_overlap 1601305 TCGTAGCCTACTTAA TCGACCAG GGT CTGGTCGA CGAGTCCTTCCTGGC PPA1482 1599757 - 1601679 + | putative regulator of sorbitol operon PPA1483 1601676 - 1602182 + | sorbitol operon activator PPA1484 1602266 - 1602844 + | PTS system enzyme II sorbitol-specific factor PPA1485 1602846 - 1603895 + | PTS system, glucitol/sorbitol-specific IIBC component PPA1486 1603923 - 1604291 + | PTS system, glucitol/sorbitol-specific IIA component TERM 736 1604344 - 1604312 - g 78 -13.3 -3.23572 | overlap 1604310 ACCGAGGTGACAATA GGCCACCCTGCCGGG ATC CATGCCAGGGTGGCC GCACACGCCGTACTA PPA1487 1604288 - 1604587 + | PTS HPr component PPA1488 1604590 - 1605963 + | arabinose operon protein AraM rbfA 1606458 - 1606027 - | ribosome-binding factor A PPA1490 1607150 - 1606539 - | hypothetical protein PPA1491 1608319 - 1607147 - | hypothetical protein PPA1492 1609098 - 1608316 - | ABC transporter, ATP-binding protein TERM 737 1609771 - 1609728 - R 100 -21 -4.0896 | overlap 1609730 1609731 AAATCGGCGGCAAAA CACGAACGGGGCGACCACGC TTCC ACGTGGACGCCCCGTTCAGG ACAGTGACCAAGCTC TERM 738 1609769 - 1609730 - R 100 -22.2 -3.63922 | overlap 1609728 1609731 ATCGGCGGCAAAACA CGAACGGGGCGACCACGC TTCC ACGTGGACGCCCCGTTCA GGACAGTGACCAAGC TERM 739 1609768 - 1609731 - R 100 -23.5 -2.78032 | overlap 1609730 1609728 TCGGCGGCAAAACAC GAACGGGGCGACCACGC TTCC ACGTGGACGCCCCGTTC AGGACAGTGACCAAG infB 1612679 - 1609785 - | translation initiation factor IF-2 TERM 740 1612369 - 1612409 + g 74 -11 -3.53012 | gap 1, opp_overlap 1612369 GGGCCACTGCTAGAA CCGGGGCGAGGACC-AGGC GTGG GCTTCGGCCCGGGCCCCGG TTTGGGACCGGGAGC TERM 741 1612402 - 1612369 - G 76 -12.3 -3.31144 | opp_overlap 1612369 GGGCCACTGCTAGAA CCGGGGCGAGGACCA GGCG TGGGCTTCGGCCCGG GCCCCGGTTTGGGAC TERM 742 1613175 - 1613209 + r 82 -14.3 -2.98823 | gap 1, opp_overlap 1613167 1613175, overlap 1613179 AAACCAACCCACAGA CGCATGACGCCCGACC CTAC GGCCGGGCGTCGT-CG TGTCTCTAGCAGGCA TERM 743 1613209 - 1613175 - R 82 -14.3 -2.97 | gap 1, opp_overlap 1613175 1613179, overlap 1613167 AAACCAACCCACAGA CGCATGACGCCCGACC CTAC GGCCGGGCGTCGT-CG TGTCTCTAGCAGGCA TERM 744 1613179 - 1613206 + r 80 -14.8 -2.72799 | opp_overlap 1613175 1613167, overlap 1613175 CAACCCACAGACGCA TGACGCCCGACC CTAC GGCCGGGCGTCG TCGTGTCTCTAGCAG nusA 1614199 - 1613228 - | transcription elongation factor NusA PPA1495 1614737 - 1614201 - | hypothetical protein PPA1496 1614866 - 1615828 + | hypothetical protein PPA1497 1616626 - 1615859 - | hypothetical protein TERM 745 1616655 - 1616688 + r 75 -11.7 -3.18945 | gap 1, opp_overlap 1616658, overlap 1616652 1616652 1616656 CTGTGACACCAGCAG TA-AGGGTCCCACCCC GAC GGGGCGGGACCCAATA TGTGTTCTCGGTCCG TERM 746 1616656 - 1616686 + r 73 -12.4 -3.15459 | opp_overlap 1616658, overlap 1616655 1616652 1616652 TGTGACACCAGCAGT AAGGGTCCCACCCC GAC GGGGCGGGACCCAA TATGTGTTCTCGGTC TERM 747 1616684 - 1616658 - R 100 -21.6 -3.24188 | opp_overlap 1616656 1616655 1616652 1616652 TGACACCAGCAGTAA GGGTCCCACCCC GAC GGGGCGGGACCC AATATGTGTTCTCGG PPA1498 1618466 - 1616712 - | hypothetical protein TERM 748 1617589 - 1617607 + g 71 -6.7 -4.14739 | opp_overlap 1617601, overlap 1617604 GCCTTGGTGTCGTTG TCACTGG CGAAA CCGGTGA TTTTGCGATCACTGG TERM 749 1617995 - 1617975 - G 82 -12.5 -3.59738 | GACGAGAGCGTCAAA GGCCCGGCC AGT AGCCGGACC GCCCTGAAGCGAATT PPA1499 1620381 - 1618624 - | prolyl-tRNA synthetase TERM 750 1619749 - 1619717 - G 71 -7.8 -4.04141 | gap 1 GAAGAACGAACGAAA GTGTCCTCACCGTTG GCTG CAACGGCTAGGA-AC TCCTCGGATCGAGAT PPA1500 1620551 - 1623193 + | hypothetical protein PPA1501 1623190 - 1624713 + | periplasmic solute binding protein PPA1502 1624734 - 1625744 + | hypothetical protein PPA1503 1625813 - 1626499 + | ABC transporter ATP-binding protein PPA1504 1626512 - 1627450 + | ABC transporter ATP-binding protein PPA1505 1628289 - 1627444 - | acetyltransferase family protein ispG 1629433 - 1628291 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PPA1507 1630339 - 1629620 - | putative transcriptional regulator PPA1508 1630953 - 1630453 - | putative nuclease PPA1509 1632536 - 1631256 - | membrane-spanning metalloprotease TERM 751 1632218 - 1632203 - G 71 -6.8 -4.18018 | opp_overlap 1632202 GCTTGTCACTGAAAA GCCGAC CTTG ATCGGC GTCTGTGATGCCCTC PPA1510 1633756 - 1632533 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase PPA1511 1633766 - 1635217 + | putative 6-aminohexanoate-dimer hydrolase PPA1512 1635214 - 1636305 + | hypothetical protein PPA1513 1637620 - 1636283 - | glutamate dehydrogenase PPA1514 1638922 - 1637705 - | hypothetical protein PPA1515 1639645 - 1638995 - | hypothetical protein TERM 752 1639411 - 1639368 - G 70 -3.8 -4.66609 | gap 1, overlap 1639370 TAGCCCAGGCAAAAA TCCGCCATCGTCACGGACCCG CGC CGGGTACG-AACAATGATGTA AAGAGGCCCCAAAGA PPA1516 1639800 - 1639639 - | hypothetical protein PPA1517 1640759 - 1639896 - | phosphatidate cytidylyltransferase TERM 753 1640667 - 1640648 - G 80 -15 -3.10012 | AATGCCACCATCCAA CGGTGCCG ATGA CGGCACCG CACAGCACTACGCCC TERM 754 1640699 - 1640742 + g 95 -19.8 -3.31144 | gap 1, opp_overlap 1640702 1640705, overlap 1640702 TAGTGATGGCAGCAG GAAGATCACGGCCGGCACG TGGAGTC CGTG-CGGCCGTGGTCTTC TTCTCAGGCTCGCCC TERM 755 1640739 - 1640702 - G 78 -13.5 -3.21747 | gap 1, opp_overlap 1640702 1640699, overlap 1640705 TGATGGCAGCAGGAA GATCACGGCCGGCACG TGGAGTC CGTG-CGGCCGTGGTC TTCTTCTCAGGCTCG TERM 756 1640702 - 1640739 + g 95 -15.7 -3.79906 | gap 1, opp_overlap 1640702 1640705, overlap 1640699 TGATGGCAGCAGGAA GATCACGGCCGGCACG TGGAGTC CGTG-CGGCCGTGGTC TTCTTCTCAGGCTCG TERM 757 1640736 - 1640705 - G 72 -13.8 -2.50016 | gap 1, opp_overlap 1640702 1640699, overlap 1640702 TGGCAGCAGGAAGAT CACGGCCGGCACG TGGAGTC CGTG-CGGCCGTG GTCTTCTTCTCAGGC PPA1518 1641325 - 1640771 - | ribosome recycling factor pyrH 1642071 - 1641358 - | uridylate kinase TERM 758 1641702 - 1641690 - G 74 -3.3 -4.7254 | opp_overlap 1641690, overlap 1641691 ACCCGGCACCAAAAA TGACG ACT CGTCC CTTCTCCATATGGCG TERM 759 1642174 - 1642225 + r 74 -12.9 -2.98072 | opp_overlap 1642180, overlap 1642187 CGACCGTCATTCGCT GGGAAACGACGAACGGCCCCACC TCGTAC GGTGGGACCGTTCGTCGTCACAA TCTCGTTATCATCCC TERM 760 1642219 - 1642180 - R 100 -25.9 -3.53444 | opp_overlap 1642174 1642187 TCATTCGCTGGGAAA CGACGAACGGCCCCACC TCGTAC GGTGGGACCGTTCGTCG TCACAATCTCGTTAT TERM 761 1642187 - 1642212 + r 75 -11.8 -3.21416 | opp_overlap 1642180, overlap 1642174 CTGGGAAACGACGAA CGGCCCCACC TCGTAC GGTGGGACCG TTCGTCGTCACAATC tsf 1643068 - 1642256 - | elongation factor Ts rpsB 1643954 - 1643103 - | 30S ribosomal protein S2 TERM 762 1644289 - 1644313 + Gr 79 -12.1 -3.48593 | CGGACAGCTGCCTAT GTCCCTGACGG TGC CCGTCGAGGAC TTCTGTGGCCACCTC PPA1523 1645867 - 1645109 - | membrane spanning protein xerC 1644242 - 1645189 + | site-specific tyrosine recombinase XerC PPA1524 1646015 - 1647097 + | hypothetical protein PPA1525 1647164 - 1647766 + | polypeptide deformylase PPA1526 1648582 - 1647773 - | rRNA methylase family protein TERM 763 1648117 - 1648078 - G 72 -2.1 -4.74504 | opp_overlap 1648082, overlap 1648080 1648114 AGGGCAACTGAAAAA CCGTCCCCATCG-AGGTCT TGAT AGCCCGACGATAGAG-CGG GTCAGCCGCGCGAGG PPA1527 1648615 - 1649601 + | sodium/bile acid symporter family protein PPA1528 1650767 - 1649799 - | hypothetical protein PPA1529 1651514 - 1651047 - | hypothetical protein TERM 764 1651337 - 1651321 - G 74 -6.5 -4.32951 | ACGGTAAGCAATAAA GCTGCCA CCA CAGCAGC GACGATGACCTGCAG PPA1530 1652326 - 1651541 - | ABC transporter ATP-binding protein TERM 765 1651749 - 1651732 - G 80 -11.3 -3.8211 | GGTGAGTGACAAGAA CCGATGC CGGA GCATCGG GATCAGTAAAAATAG TERM 766 1653137 - 1653097 - g 87 -17.6 -3.02947 | overlap 1653100 1653104 TACGGAGCACAGACA CGAGAAACGGCGCTGCGC CAACT GCGCAACGCCGCCTCCCA AGCTGTTACCGCAGC TERM 767 1653134 - 1653100 - g 86 -17.9 -2.73771 | overlap 1653097 1653104 GGAGCACAGACACGA GAAACGGCGCTGCGC CAACT GCGCAACGCCGCCTC CCAAGCTGTTACCGC TERM 768 1653130 - 1653104 - g 100 -17.3 -4.05389 | overlap 1653100 1653097 CACAGACACGAGAAA CGGCGCTGCGC CAACT GCGCAACGCCG CCTCCCAAGCTGTTA PPA1531 1652440 - 1653174 + | hypothetical protein PPA1532 1653953 - 1653180 - | enoyl-(acyl carrier protein) reductase PPA1533 1654713 - 1653994 - | 3-oxoacyl-[acyl-carrier protein] reductase PPA1534 1654792 - 1655136 + | hypothetical protein PPA1535 1655239 - 1656045 + | membrane spanning protein PPA1536 1656042 - 1656863 + | putative resistance protein PPA1537 1657446 - 1656892 - | hypothetical protein TERM 769 1657037 - 1657089 + g 70 -4.9 -4.56597 | overlap 1657033 1657032 1657052 1657054 GACTTTCCTGCCCCG GCGCGA-CGCAATTTGCGCAGGGCT TTCTC AGCCTTGTGTGCTTTGCGATCG-GC TTTTTCGGCCCGGGC PPA1538 1659114 - 1657516 - | ABC transporter ATP binding protein PPA1539 1659670 - 1659173 - | acetyltransferase family protein PPA1540 1659596 - 1660051 + | hypothetical protein PPA1543 1662935 - 1662579 - | hypothetical protein PPA1544 1663420 - 1662935 - | hypothetical protein PPA1545 1664658 - 1663417 - | putative cysteine desulfurase PPA1546 1665428 - 1664661 - | ABC transporter ATP-binding protein PPA1547 1665758 - 1665435 - | putative dioxygenase ferredoxin subunit PPA1548 1667032 - 1665758 - | hypothetical protein PPA1549 1668467 - 1667019 - | hypothetical protein PPA1550 1669228 - 1668464 - | ArsR family transcriptional regulator TERM 770 1669101 - 1669077 - G 74 -12.2 -3.19602 | gap 1, opp_overlap 1669069 1669093, overlap 1669075 GCTGTCAGACCAAGA CGATCGGCCAG TTCG CTGGCCG-TCG ACGGGCCATTGTGCA TERM 771 1669193 - 1669220 + g 70 -4 -4.58395 | overlap 1669195 GACGATGTCGCGACC TGCGACGGCCAC CTCG GTGTCGGTCGAA TTTTTCACAACTCCA TERM 772 1670647 - 1670624 - g 71 -8 -4.06179 | GCCAAAACTGATAAA GACGTCGCCG CATT CGGTGCCGTC GGCCAAAAGGCCGTC PPA1552 1669544 - 1670809 + | putative periplasmic maltose-binding protein TERM 773 1670975 - 1670952 - g 75 -3 -4.87273 | gap 1, overlap 1670954 AAGACCCGAGAAAAA CGTGTCGC-CG CAG CGAGCGGCAAG TACTCCGGGTCGCTG TERM 774 1671413 - 1671398 - g 72 -2.5 -4.8048 | overlap 1671405 CCCCGACACCAAAAA GGTAC AAGCTG GCACC CCCGACCAGCCTCTA PPA1553 1670910 - 1672514 + | maltose transport system permease protein MalF TERM 775 1673113 - 1673129 + G 81 -4.3 -4.88918 | overlap 1673115 AGCACGAGTAGACGG TGCCGGC CAC GCCCGTA TTTTCTTTACCCTCA PPA1554 1672514 - 1673419 + | maltose transport system permease protein MalG PPA1555 1673445 - 1674530 + | MalR repressor protein TERM 776 1675465 - 1675439 - g 79 -12.3 -3.43071 | opp_overlap 1675446, overlap 1675419 TTCCACATCAAGGAA GATGACGCCCG TAACC CGGGTGTCATC GCTGACTGCACCGGT TERM 777 1675697 - 1675672 - g 71 -8.9 -3.7282 | overlap 1675673 TTACCTCATCAACAA CGCCGTCGCGA AAGC CCGCTACGGCA CGGTCTCGGAGATGG hppA 1674674 - 1677157 + | membrane-bound proton-translocating pyrophosphatase PPA1557 1677186 - 1677935 + | ABC transporter ATP-binding protein PPA1558 1677937 - 1678701 + | putative ABC transporter-associated permease PPA1559 1678515 - 1679585 + | hypothetical protein PPA1560 1681189 - 1679681 - | sialidase precursor PPA1561 1682413 - 1681304 - | membrane protein, putative heme O synthase TERM 778 1681702 - 1681688 - G 72 -2.8 -4.86773 | GAAAACGATGAAAAA GAGC ACCAACG GCTC CCATCCCACGCTCCC TERM 779 1681963 - 1681980 + g 83 -2.5 -5.17353 | overlap 1681964 GACGCGGGAGAGGAC GGCGCCG AGTC CGACGCA TTTTTTGGTCAATAT TERM 780 1682748 - 1682771 + G 90 -14.6 -3.55444 | GAACCGTGGCCTACT CCCACCAGGT TTTG GCCTGGTGGG TTTCGCCCGTCGAGA PPA1563 1682542 - 1684116 + | glucose-6-phosphate 1-dehydrogenase PPA1564 1684126 - 1685058 + | hypothetical protein TERM 781 1685444 - 1685457 + G 76 -6.7 -4.49556 | overlap 1685408 CCAGGAGCTCGGCGG TGTCG TCTT CGACA TTTGTTTGCTGGGGA PPA1565 1685055 - 1685789 + | 6-phosphogluconolactonase TERM 782 1686296 - 1686257 - g 76 -13.6 -3.0094 | GGCCACCGATATAGA CTCCACGATCTGGTCGGT GCGT ACCTACCAGATCGTGCCG TGGGACCTCGCCCCC PPA1566 1686138 - 1686632 + | hypothetical protein PPA1567 1686718 - 1687515 + | hypothetical protein valS 1687656 - 1690268 + | valyl-tRNA synthetase TERM 783 1690355 - 1690328 - f 100 -14.8 -4.23892 | opp_overlap 1690328 CGGAACCAGGGAAAA GGGGTCGACCGC AGCG ACGGTCGGCCCC TTTCTCGTGGTGAGT TERM 784 1690328 - 1690355 + F 100 -16.3 -3.99592 | opp_overlap 1690328 CGGAACCAGGGAAAA GGGGTCGACCG CAGCGA CGGTCGGCCCC TTTCTCGTGGTGAGT TERM 785 1692413 - 1692461 + G 77 -15.3 -2.70932 | opp_overlap 1692416 1692428 1692431 1692443, overlap 1692416 GCTCTTCGCTCGACT CAACCAGCTGAGGAAGGAGTTGG GAG CCAAGTCCAACCTCGACTGGTTG TACTTCGACACCAAC TERM 786 1692416 - 1692458 + G 74 -11.2 -3.50853 | opp_overlap 1692416 1692428 1692431 1692443, overlap 1692413 CTTCGCTCGACTCAA CCAGCTGAGGAAGGAGTTGG GAG CCAAGTCCAACCTCGACTGG TTGTACTTCGACACC TERM 787 1693216 - 1693204 - g 74 -6.2 -4.56597 | opp_overlap 1693205, overlap 1693205 TGCCTGCTGCAAAAA CCCC GAACT GGGG AGAGGGAAGTCACTT TERM 788 1693935 - 1693910 - g 72 -11.9 -3.30203 | gap 1, overlap 1693905 GCACGAAGAACGCAA CGG-GATCGTGC TGC GCACGACCACCG CGTCCGCCCCTCTGA PPA1569 1690506 - 1694471 + | hypothetical protein TERM 789 1694519 - 1694551 + T 100 -24.3 -3.30124 | opp_overlap 1694519 CCCCGCCTCTAGAAA GGATCAGCCCCTGCG TGA TGCAGGGGCTGATCC TTATCGGCCGTGGCC TERM 790 1694551 - 1694519 - T 100 -23.6 -3.85698 | opp_overlap 1694519 CCCCGCCTCTAGAAA GGATCAGCCCCTGC GTGAT GCAGGGGCTGATCC TTATCGGCCGTGGCC PPA1570 1697924 - 1694589 - | tricorn protease TERM 791 1695882 - 1695866 - G 74 -10.9 -3.43071 | overlap 1695869 TGTGAGATGAAGGAA CGACGAT GAT ATCGTCG CGATGGCGCACCACG TERM 792 1697979 - 1697953 - R 75 -9.4 -3.86194 | overlap 1697954 AAGCGGGCTGACAAA CTGCTCGTCGAG GTC CTTGACGAGCAC TAACCTCAGGCAGAT TERM 793 1697978 - 1697954 - R 74 -12.9 -2.91395 | overlap 1697953 AGCGGGCTGACAAAC TGCTCGTCGAG GTC CTTGACGAGCA CTAACCTCAGGCAGA clpX 1699274 - 1697985 - | ATP-dependent protease ATP-binding subunit PPA1572 1700224 - 1699463 - | ATP-dependent Clp protease proteolytic subunit 2 TERM 794 1700172 - 1700196 + gr 71 -11.3 -3.26471 | overlap 1700173 ACCTCACTGATTGGG GGCGTCGCCGC GAA GCTGCGACGCA TTGCTGTAGACGTGG TERM 795 1700173 - 1700195 + gr 78 -14.8 -2.55668 | overlap 1700172 CCTCACTGATTGGGG GCGTCGCCGC GAA GCTGCGACGC ATTGCTGTAGACGTG PPA1573 1700798 - 1700160 - | ATP-dependent Clp protease proteolytic subunit 1 PPA1574 1702175 - 1700874 - | hypothetical protein TERM 796 1701501 - 1701555 + g 70 -3.6 -4.6902 | gap 1, opp_overlap 1701522, overlap 1701466 CATCGTCACGACGCT GGTGGTATCCGAGGCAACCGATGTC ACGACC GACATCACTTGCTGCGGAT-CGATC TTTTTGAGCTTATCG TERM 797 1701930 - 1701947 + g 74 -4.1 -4.77438 | gap 1 AGGCAAGCCGTGTTT GCTGGTGG CTA CC-TCAGC TTTTTCGTGGTCACT TERM 798 1702193 - 1702243 + r 100 -24.1 -2.65264 | gap 1, opp_overlap 1702219 1702220 AGCTTCCTCAGGGTT GACGTGG-GACCGGCGTCGTGCGG AAAC CCGCACGACGCCGGTCATCACGGA TCATGTCGATCCTAC tig 1703872 - 1702280 - | trigger factor TERM 799 1704544 - 1704559 + G 73 -9 -3.86015 | overlap 1704531 1704530 ATCGTGCTCCTAGTG GAGCGA GCTT TCGCTC TTTCTCACCACCGTG PPA2360 1704361 - 1704909 + | hypothetical protein TERM 800 1705171 - 1705204 + G 75 -13.2 -2.90075 | gap 1 GACGCGACCCCGGTA GCCGACGCGTCCC CGCACTATC GGGACGCG-CGGC TCTGGTTGGAAGCAA PPA1577 1704973 - 1707849 + | putative helicase PPA1578 1707836 - 1708264 + | hypothetical protein PPA1579 1708330 - 1708953 + | S51 family peptidase PPA1583 1710894 - 1710571 - | hypothetical protein PPA1584 1711293 - 1711024 - | hypothetical protein PPA1585 1712093 - 1711359 - | phage-associated protein PPA1586 1713385 - 1712135 - | ParB family DNA methylase TERM 801 1712446 - 1712467 + gr 77 -10.9 -3.60296 | opp_overlap 1712450, overlap 1712450 TCCTGCGAGGCTTAT CAAACCGCC AGAC GGTGGTTTG TTTCCGATCCGCGTA TERM 802 1712450 - 1712463 + gr 74 -5.9 -4.44046 | opp_overlap 1712450, overlap 1712446 GCGAGGCTTATCAAA CCGCC AGAC GGTGG TTTGTTTCCGATCCG PPA1587 1714547 - 1713357 - | S-adenosylmethionine synthetase TERM 803 1714613 - 1714587 - R 100 -15.9 -4.45738 | GAGGGGAACAAGAAA GCGTCCACCCC ACTAG AGGGTGGACGC GAAGATCATGAGGGG PPA1589 1715204 - 1714632 - | hypothetical protein PPA1590 1715266 - 1716078 + | hypothetical protein PPA1591 1718509 - 1716068 - | hypothetical protein PPA1592 1719278 - 1718901 - | phage associated protein TERM 804 1719301 - 1719353 + r 73 -12 -3.08032 | gap 2, opp_overlap 1719307, overlap 1719307 CCCTTTCCCGGACAC GGCAAAGCCCCAAGGCA--CCCAGCC GAT GACCGGGCTTGCCCTGGGGCTTTTCC TACTTTTCAACCACC TERM 805 1719307 - 1719347 + r 78 -8.2 -4.42667 | gap 2, opp_overlap 1719307, overlap 1719301 CCCGGACACGGCAAA GCCCCAAGGCA--CCCAGCC GAT GACCGGGCTTGCCCTGGGGC TTTTCCTACTTTTCA TERM 806 1719347 - 1719307 - R 95 -14.8 -3.63627 | gap 2, opp_overlap 1719307 1719301 CCCGGACACGGCAAA GCCCCAAGGC-A-CCCAGCC GAT GACCGGGCTTGCCCTGGGGC TTTTCCTACTTTTCA PPA1593 1719895 - 1719434 - | phage-associated protein PPA1594 1721262 - 1719886 - | phage-associated protein PPA1595 1721521 - 1721243 - | hypothetical protein PPA1596 1723914 - 1721656 - | phage-associated protein TERM 807 1721997 - 1722031 + g 73 -10.6 -3.65046 | opp_overlap 1721994, overlap 1721994 1722000 TCCATGCAAGTACCG CTCCGCCGGCGGTCTC GTA GAGGTGGTCGGCGTAG TTCTTCACATCGGAG PPA1597 1724348 - 1723911 - | hypothetical protein PPA1598 1725109 - 1724348 - | Bro family antirepressor PPA1599 1725426 - 1726343 + | phage-related protein TERM 808 1728037 - 1728017 - T 71 -6.8 -4.15044 | gap 1 GCTCGGGTCAAGAAA CCCG-GCCG CCAA CAGCTCGGG GTGATGACGCTGCAG PPA1602 1728581 - 1728384 - | hypothetical protein PPA1603 1729139 - 1728594 - | phage-associated protein PPA1604 1730287 - 1729145 - | phage-associated protein PPA1605 1730855 - 1730280 - | phage-associated protein TERM 809 1730768 - 1730785 + g 85 -9.1 -4.64861 | AGATCGCGCGCAGCA TCCGCCT GCTG GGGCGGA TTTCTTTTGCAGCGA PPA1606 1731550 - 1730957 - | phage-associated protein TERM 810 1731596 - 1731538 - G 100 -19.1 -3.59979 | gap 3, overlap 1731540 1731541 GGTGTTGAGCGGAAA CAGTGACGGGCACCAACCCG-ACCCGGG GGTGAA CCCGGGTACAGG-TGGTGCCCGTCAA-G CGCTCAACGGAGGTC TERM 811 1731595 - 1731540 - G 100 -22.8 -3.38046 | overlap 1731538 1731541 TGTTGAGCGGAAACA GTGACGGGCACCAACCCG-ACCCGGG GGTGAA CCCGGGTACAGG-TGGTGCCCGTCAA GCGCTCAACGGAGGT TERM 812 1731594 - 1731541 - G 100 -26.3 -2.62613 | overlap 1731540 1731538 GTTGAGCGGAAACAG TGACGGGCACCAACCCG-ACCCGGG GGTGAA CCCGGGTACAGG-TGGTGCCCGTCA AGCGCTCAACGGAGG TERM 813 1731657 - 1731678 + H 71 -10.1 -3.53012 | gap 1, overlap 1731677 TGTAGGAGGAAGGCG GCCG-GCCGG TGA CCGGTACGGC TTTGACCGCCACAGC TERM 814 1732824 - 1732801 - g 82 -11.1 -3.96892 | opp_overlap 1732820 AATGGGTACGAGAAA CATCGTGGA ACTGCA TCCACGATG GGCGGCCATTGTTTG PPA1607 1732056 - 1733057 + | phage-associated protein PPA1608 1733057 - 1733503 + | phage-associated protein TERM 815 1734664 - 1734646 - g 81 -13.8 -3.28924 | overlap 1734627 GATCTCGCCGCAGAA GCCGAGCG CAT CGCCCGGC GCATCAGCGGCGAGT PPA1609 1733500 - 1735374 + | phage-associated protein PPA1610 1735364 - 1735600 + | putative transcriptional regulator PPA1611 1735601 - 1737592 + | putative type III restriction-modification system TERM 816 1739035 - 1739021 - g 70 -10 -3.48342 | AACCAACGACGACAA CCGGTT CTG AACCGG GCACCGGTGTCAGTG PPA1612 1737592 - 1740180 + | putative type III restriction enzyme PPA1613 1740862 - 1740164 - | hypothetical protein TERM 817 1743990 - 1743976 - g 77 -3.5 -5.00616 | overlap 1743977 GTGCGGCGGAAAAAA GGCGA GGCCA TCACC GAGGCCGAGCGCACT PPA1614 1741330 - 1744119 + | putative restriction enzyme TERM 818 1747331 - 1747352 + G 81 -5.1 -4.9218 | TGAGATGGGTATCGA CATCGGTGA CCTA TCAACGGTG TTTTTGTCGTCGCTG TERM 819 1749569 - 1749549 - g 71 -6.7 -4.18934 | overlap 1749550 GACGACGCCAAGAAA CGCGCTGCG CTC CGAAGCGCC GGAATTGAGGTACTG PPA1615 1744116 - 1750469 + | DeaD/DeaH box helicase TERM 820 1751990 - 1752019 + G 71 -7.1 -4.25104 | gap 1, overlap 1751991 ACTGGAGGCTCATTC GGTCGCT-GGTCCC CGA GGGACCAAACGACA TTTTCATCGCCGAGG PPA1616 1750462 - 1752717 + | UvrD/Rep helicase TERM 821 1752857 - 1752829 - T 70 -12.4 -2.79915 | ACGTAGCCGATCACA CTGGCGCGCGTC TCGGC GAGGCGCACCAG CCCTTGATCGGCGTC PPA1617 1753515 - 1752871 - | hypothetical protein PPA1618 1754335 - 1753664 - | hypothetical protein PPA2361 1754727 - 1754332 - | hypothetical protein PPA1620 1756042 - 1755101 - | putative poly(3-hydroxyalkanoate) depolymerase TERM 822 1755539 - 1755514 - G 73 -9.7 -3.9398 | gap 1, overlap 1755515 CCATAACCTTATAAA CCGCA-CGCGGC AAC GCCACGCTGCGA CGACGCGGTGGATGA lysS 1759447 - 1756085 - | lysyl-tRNA synthetase TERM 823 1759280 - 1759253 - G 73 -9.8 -3.62762 | overlap 1759244 1759247 AATGAACAACGAGAA CACGTTGTTGGC GATA GCCACCCACGTG GTGCGGCTAAACACC PPA1622 1760944 - 1759598 - | hypothetical protein TERM 824 1760105 - 1760122 + g 79 -12.7 -3.53012 | ACAGGTGAGGAGCTT GGCGACG TGAT CGTCGCC TTTCCCAAAGGGCCG PPA1623 1761868 - 1760969 - | formamidopyrimidine-DNA glycosylase TERM 825 1761925 - 1761902 - R 95 -15.4 -3.72678 | opp_overlap 1761897 CAAACAGCACCGAAA CCATGACCAC CGGC GTGGTCATGG GTCAATCCTTAAAGG PPA1624 1762568 - 1762095 - | ribose-5-phosphate isomerase B PPA1625 1762635 - 1763924 + | hypothetical protein TERM 826 1763935 - 1763974 + T 87 -15 -3.31144 | opp_overlap 1763940, overlap 1763936 TCTGAGGCACCCTTA CGCAACGTGGACCAGGCA TCTT TACCCGGTCCACGTTGCC TTATCGGAGTGACAG TERM 827 1763936 - 1763973 + T 95 -18.5 -2.58544 | opp_overlap 1763940, overlap 1763935 CTGAGGCACCCTTAC GCAACGTGGACCAGGCA TCTT TACCCGGTCCACGTTGC CTTATCGGAGTGACA TERM 828 1763969 - 1763940 - T 89 -16.5 -3.06183 | opp_overlap 1763936 1763935 GGCACCCTTACGCAA CGTGGACCAGGCA TCTT TACCCGGTCCACG TTGCCTTATCGGAGT ligA 1766230 - 1764008 - | NAD-dependent DNA ligase LigA TERM 829 1764570 - 1764587 + g 78 -6.9 -4.70659 | overlap 1764579 ATTTTCTTGGTCGTG GCAGTCG GAGT CGACGGC TTTTTCGCTGTCGCC PPA1627 1766766 - 1769360 + | aminopeptidase N TERM 830 1769368 - 1769410 + T 100 -29.5 -3.25823 | opp_overlap 1769370 1769375 GCGGGTGACGTGAAC GACGATAGTGGCCTCGAAC CGTTT GTTCGAGGCCACTATCGTC TTCGTATCAGGCAGC TERM 831 1769408 - 1769370 - T 100 -26.3 -2.73364 | opp_overlap 1769368, overlap 1769375 GGGTGACGTGAACGA CGATAGTGGCCTCGAAC CGTTT GTTCGAGGCCACTATCG TCTTCGTATCAGGCA TERM 832 1769403 - 1769375 - T 100 -19 -2.86343 | opp_overlap 1769368, overlap 1769370 ACGTGAACGACGATA GTGGCCTCGAAC CGTTT GTTCGAGGCCAC TATCGTCTTCGTATC PPA1628 1769663 - 1769436 - | hypothetical protein TERM 833 1770369 - 1770348 - g 84 -3.6 -5.24129 | CGGTCTTAGAAAAAA TCTCCGCC CACGTC GACGGTGA ACCCTGCTGCGCATG PPA1629 1769855 - 1771303 + | 6-phosphogluconate dehydrogenase PPA1630 1771379 - 1773052 + | alpha-glucosidase/amylase family protein TERM 834 1773102 - 1773065 - T 70 -12 -2.79831 | gap 1, opp_overlap 1773071 TGAACGTCGATCACA CCGTGACGAGGTAGGCC GATAA GGCCTGCCTCGTCT-GG TCGTCGATGGGCACC TERM 835 1773071 - 1773097 + T 86 -15.9 -2.83164 | opp_overlap 1773065 TCGATCACACCGTGA CGAGGTAGGCC GATAA GGCCTGCCTCG TCTGGTCGTCGATGG PPA1631 1773905 - 1773060 - | thioesterase family protein TERM 836 1773336 - 1773364 + g 76 -13.1 -3.3676 | CCCAGCTCGTCTCAT TCCCGGCGACCAC GAC GTCGTCGCCAGGA TTCTCGCCTCTTGCA PPA1632 1775809 - 1773902 - | putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) PPA1633 1775955 - 1776491 + | MarR family transcriptional regulator TERM 837 1777882 - 1777899 + G 73 -10.5 -3.68936 | GGGGAGCATGGTGAC GGCCGGG CCCG CTCGGCC TTGTTGGACTTGATG PPA1634 1776496 - 1779369 + | FAD-linked oxidoreductase/iron-sulfur cluster-binding protein PPA1635 1779451 - 1779792 + | PadR family transcriptional regulator TERM 838 1780243 - 1780275 + T 100 -19.2 -3.1886 | opp_overlap 1780227 1780240 1780237, overlap 1780244 GGGACACAATTAGTC TCGGTCCCGGGCTG AATGA CAGTCCGGGACCGG TTCATGCACTTCGCT TERM 839 1780244 - 1780274 + T 100 -20.5 -2.50994 | opp_overlap 1780227 1780240 1780237, overlap 1780243 GGACACAATTAGTCT CGGTCCCGGGCTG AATGA CAGTCCGGGACCG GTTCATGCACTTCGC PPA1636 1781975 - 1780290 - | putative ABC transporter ATP-binding protein TERM 840 1780745 - 1780767 + g 77 -3.3 -4.99035 | TGATGTAGTCCAGCC CGTCGGAGA CGACC TCCCAGACG TTTTTCTCTGGGTCG PPA1637 1782558 - 1782097 - | single-strand binding protein PPA1638 1784287 - 1782677 - | putative ABC transporter PPA1639 1786149 - 1784284 - | putative ABC transporter PPA1640 1787482 - 1786172 - | hypothetical protein TERM 841 1787238 - 1787228 - G 80 -3.2 -5.06961 | overlap 1787231 ATCAAGAAAAATAAA GATC GCT GACC ACACAGCAGCCGTCG PPA1641 1787737 - 1788948 + | hypothetical protein PPA1642 1789012 - 1789620 + | oligoribonuclease TERM 842 1789806 - 1789789 - f 79 -12.7 -3.29511 | CCCATTCTTTGAGAA GGGGGAG GCGA CTCCCCC TTAACCCCCTCGAGC PPA1643 1790038 - 1791465 + | D-serine/D-alanine/glycine transporter PPA1644 1791526 - 1792959 + | serine/threonine protein kinase PPA1645 1793012 - 1794250 + | putative beta-hexosaminidase TERM 843 1794648 - 1794636 - g 74 -6.9 -4.42386 | overlap 1794637 1794638 CTGGGACGGACAAAA CCCCC AGC AGGGG TGGGACCCCACCCAG PPA2356 1794265 - 1796091 + | hypothetical protein TERM 844 1796105 - 1796146 + T 100 -26.2 -3.3452 | opp_overlap 1796105 1796109, overlap 1796109 GATAACCAGATTCAA GCAATGACGTGGCTTCCT GTTGAG AGGAAGCCACGTCATTGC TTATGAGATCCTATG TERM 845 1796146 - 1796105 - T 100 -26.2 -3.16981 | opp_overlap 1796105 1796109, overlap 1796109 GATAACCAGATTCAA GCAATGACGTGGCTTCCT GTTGAG AGGAAGCCACGTCATTGC TTATGAGATCCTATG TERM 846 1796142 - 1796109 - T 100 -19.8 -3.3941 | opp_overlap 1796109 1796105, overlap 1796105 ACCAGATTCAAGCAA TGACGTGGCTTCCT GTTGAG AGGAAGCCACGTCA TTGCTTATGAGATCC TERM 847 1796109 - 1796142 + T 100 -19.8 -3.45118 | opp_overlap 1796105 1796109, overlap 1796105 ACCAGATTCAAGCAA TGACGTGGCTTCCT GTTGAG AGGAAGCCACGTCA TTGCTTATGAGATCC TERM 848 1798013 - 1798024 + T 70 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTGGTAAACAGT TERM 849 1800221 - 1800207 - T 100 -8.6 -4.87665 | TTCCACTCACAAAAA CTCCTT AGA AAGGAG GTGATCCAGCCGCAC PPA1649 1802244 - 1802023 - | hypothetical protein dnaE2 1805693 - 1802289 - | error-prone DNA polymerase PPA1651 1807291 - 1805699 - | nucleotidyltransferase/DNA polymerase involved in DNA repair (UmuC) PPA1652 1807877 - 1807281 - | hypothetical protein PPA1653 1808045 - 1809364 + | putative UDP-N-acetylmuramyl tripeptide synthase (Mur ligase) TERM 850 1810058 - 1810040 - g 70 -10.2 -3.51633 | ATATACCGGAGATAA CGGCGCTG CGA CAGCGTCG GATTGAGGCTGTGCG PPA1654 1809361 - 1810089 + | putative cobyric acid synthase CobQ TERM 851 1810261 - 1810230 - f 78 -11.6 -3.76952 | opp_overlap 1810230 CGCACCGAAGTGAAA GTCGTTTCGCCCTA AAAT TGGGGCGAAATGAC TTTTTCATACCCCCT TERM 852 1810230 - 1810261 + F 100 -16 -4.7254 | opp_overlap 1810230 CGCACCGAAGTGAAA GTCGTTTCGCCCTA AAAT TGGGGCGAAATGAC TTTTTCATACCCCCT TERM 853 1811235 - 1811177 - f 79 -7.4 -4.66953 | gap 2, overlap 1811179 GGAAGACGTTAAAAA GGCCACCGAAGCCGTCCGCAAGCTCCCC GGTAT GCAGAACAT-CGG-CGGCTTTGGTGGTC AATGGGCCAAATACG TERM 854 1811934 - 1811985 + F 73 -12.2 -3.14132 | gap 1, opp_overlap 1811941 AACTGACTGTCATTC GACCACATGGACACGGCGGGGCGGG TCA CCTACCCCGCCGTACCTATG-GATC TTGCTCGCACCACCC TERM 855 1811979 - 1811941 - f 83 -15.2 -2.79796 | opp_overlap 1811934 TGTCATTCGACCACA TGGACACGGCGGGGCGGG TCA CCTACCCCGCCGTACCTA TGGATCTTGCTCGCA PPA1657 1812034 - 1813056 + | binding-protein-dependent transport system inner membrane component TERM 856 1813130 - 1813115 - g 89 -4.7 -5.22006 | CCACCATAAGAAAAA CACCT GGGCCA AGGTG CTGCCGATCATCGGC PPA1658 1813053 - 1813859 + | binding-protein-dependent transport system inner membrane component TERM 857 1813869 - 1813910 + T 100 -20.3 -3.63627 | gap 1, opp_overlap 1813872, overlap 1813870 1813871 AAATGATGCGGTAAC ACA-GTGTGGCTCCGGTCCA CCA TGGGCCGGAGCCACACCTGC TTTGCGCTATGACCG TERM 858 1813870 - 1813909 + T 100 -23.8 -2.77962 | gap 1, opp_overlap 1813872, overlap 1813869 1813871 AATGATGCGGTAACA CA-GTGTGGCTCCGGTCCA CCA TGGGCCGGAGCCACACCTG CTTTGCGCTATGACC TERM 859 1813871 - 1813907 + T 100 -23.1 -2.93585 | opp_overlap 1813872, overlap 1813870 1813869 ATGATGCGGTAACAC AGTGTGGCTCCGGTCCA CCA TGGGCCGGAGCCACACC TGCTTTGCGCTATGA TERM 860 1813906 - 1813872 - T 100 -24.4 -3.07344 | opp_overlap 1813871 1813870 1813869 TGATGCGGTAACACA GTGTGGCTCCGGTCCA CCA TGGGCCGGAGCCACAC CTGCTTTGCGCTATG PPA1660 1814499 - 1813933 - | hypothetical protein TERM 861 1814067 - 1814080 + g 83 -4.5 -5.06816 | TCTTAGCGTTCTTCT TGCCG AGCT TGGCA TTTTTCTTGGCAGCT PPA1661 1814529 - 1815068 + | putative peroxiredoxin (AhpC/TSA family protein) TERM 862 1816002 - 1815975 - g 71 -5.6 -4.35518 | AACGTCATATCAAAA CCCGTTCTAC GCATCCCA GTACAACGGG TCCCAGAGCGCCGGT PPA1662 1815622 - 1816500 + | lysozyme M1 precursor TERM 863 1817394 - 1817379 - T 86 -3.2 -5.54894 | opp_overlap 1817379, overlap 1817380 AATCGAGGAAAAAAA TCAAGC TAAG GCTTGC TGTAATATAAAACCA PPA1663 1817925 - 1817359 - | protein associated to putative adhesion protein PPA1664 1818365 - 1817922 - | hypothetical protein TERM 864 1817965 - 1817989 + g 78 -9.9 -3.97209 | GGGTCGCAGGCGTCT CCGATGCCGTC GTG GTCGGTGTCGG TTTGGTCTTGGTTGG PPA1665 1819894 - 1818443 - | hypothetical protein TERM 865 1818839 - 1818855 + g 74 -6.5 -4.32034 | opp_overlap 1818837 1818845 CCGCTGCTGAATATG CGACAAC AAC GTCGTCG TTTTCGTCATCGTGG PPA1666 1820462 - 1819917 - | hypothetical protein TERM 866 1820772 - 1820750 - g 73 -10.6 -3.60098 | ACCGGCCAGGCCAAA GCCACCGACA CCG TGTCGATGAC GACATCCGCCAGTGA PPA1667 1820561 - 1820818 + | hypothetical protein PPA1668 1821857 - 1820967 - | RpiR family transcriptional regulator TERM 867 1821675 - 1821661 - G 71 -5.6 -4.42653 | overlap 1821662 AGCTTACGCACAAAA CGCGTC ACC GACGCC GTTGAGGTCCCCGTC PPA1669 1822215 - 1824128 + | membrane-spanning protein PPA1670 1825577 - 1824180 - | DNA polymerase IV PPA1671 1826044 - 1825574 - | dihydrofolate reductase thyA 1826897 - 1826088 - | thymidylate synthase PPA1673 1827512 - 1826898 - | putative nucleoside-triphosphatase rph 1828273 - 1827509 - | ribonuclease PH PPA1675 1829200 - 1828307 - | glutamate racemase PPA1676 1829333 - 1829662 + | ferrous iron transport protein A PPA1677 1829723 - 1831687 + | ferrous iron transport protein B PPA1678 1831684 - 1832229 + | hypothetical protein PPA1680 1833077 - 1832481 - | hypothetical protein TERM 868 1832856 - 1832826 - G 79 -12.6 -3.54543 | opp_overlap 1832823, overlap 1832827 ACCGAGGCCTGCAAA CCGTAGCCGTGCAT CGC ATGCACGGCTACCT CCATCTCTATCTTTA TERM 869 1832855 - 1832827 - G 79 -16.1 -2.72511 | opp_overlap 1832823, overlap 1832826 CCGAGGCCTGCAAAC CGTAGCCGTGCAT CGC ATGCACGGCTACC TCCATCTCTATCTTT PPA1681 1833164 - 1834504 + | nicotinate phosphoribosyltransferase PPA1682 1834697 - 1834972 + | DNA-binding protein HU TERM 870 1835037 - 1835003 - T 89 -16.6 -3.05844 | gap 1, opp_overlap 1834990 1835004 1835005 TGTTGGATCTCAACA TGTGGGGTCCGGTGC TTCACG GCACCGGACCCCA-A TTTTTCGTTATTACG TERM 871 1835004 - 1835037 + T 100 -18.9 -4.99435 | opp_overlap 1835003, overlap 1834990 1835005 GTTGGATCTCAACAT GTGGGGTCCGGTGCT TCAC GGCACCGGACCCCAA TTTTTCGTTATTACG TERM 872 1835005 - 1835036 + T 100 -22.4 -3.58577 | opp_overlap 1835003, overlap 1834990 1835004 TTGGATCTCAACATG TGGGGTCCGGTGCT TCAC GGCACCGGACCCCA ATTTTTCGTTATTAC PPA1683 1837185 - 1835077 - | 4-alpha-glucanotransferase (amylomaltase) TERM 873 1835936 - 1835915 - G 71 -6.5 -4.26076 | CCAGCCTGATTAAAA GCATCAGGC GGTG ACCCGACGC AAACGCCGTCAGCAA PPA1684 1838097 - 1837276 - | hypothetical protein PPA1685 1838405 - 1838701 + | hypothetical protein PPA1686 1839157 - 1838726 - | 3-dehydroquinate dehydratase TERM 874 1838960 - 1838938 - G 78 -14.2 -3.14463 | AAGCCGCCGGATTAA TGACGACCGG GGT CCGGTCATCA GCGGCCTGATGAATC PPA1687 1840185 - 1839154 - | cation transport protein PPA1688 1841201 - 1840182 - | hypothetical protein PPA1689 1841476 - 1841198 - | hypothetical protein PPA1690 1841947 - 1841486 - | hypothetical protein PPA1691 1841927 - 1842412 + | hypothetical protein PPA1692 1843920 - 1842418 - | hypothetical protein TERM 875 1843037 - 1843024 - G 70 -3.8 -4.59109 | opp_overlap 1843009 GACAGCTGGCAAAAA CAGC GTCTTG GCTG CCTGAGTCATCGCGC PPA1693 1847246 - 1843917 - | putative glycosyl transferase TERM 876 1846515 - 1846478 - G 79 -9.7 -4.18018 | gap 1 CGCCGTCACGGAAAA GGGGAAGCGCC-GGGTCG AAA CCACCCAGGCGCCGCCAC ACGTCCACCCGAACG PPA1694 1847652 - 1847395 - | transcription factor WhiB TERM 877 1847532 - 1847545 + g 71 -8.1 -4.07687 | TGCGCTTGGCCTCAC GGGTG GATC CACCC TTTTCAGGGAAGAAT PPA1695 1848524 - 1847829 - | hypothetical protein TERM 878 1848206 - 1848192 - G 82 -12.8 -3.58269 | opp_overlap 1848191, overlap 1848184 CAAGGCAGCCCCAAA GGCCCC GCC GGGGCC GTGAATTGGTGACAA TERM 879 1848344 - 1848332 - G 71 -5.5 -4.3467 | overlap 1848319 1848333 ACCGGCACACCAAAA CTGCC GCC AGCAG CAACAAAATCATGCC PPA1696 1849597 - 1848521 - | mannose-1-phosphate guanylyltransferase PPA1697 1849665 - 1850396 + | hypothetical protein PPA1698 1851421 - 1850399 - | succinoglycan biosynthesis protein ExoA PPA1699 1851527 - 1852810 + | cell envelope-related transcriptional attenuator PPA1700 1853030 - 1855987 + | beta-galactosidase PPA1701 1856638 - 1856048 - | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 880 1856541 - 1856580 + g 89 -12 -4.22535 | ATCGACACTTGAGGG CCATTGGCGTCGCACGCC AGCC GGCGTGCTCCCCCGGTGG TTGTTTTGACCTTCT PPA1702 1857803 - 1856631 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 881 1857844 - 1857827 - H 76 -6.9 -4.54047 | CCACCGGACATAAAA CGCCCAC CGTG ACGGGCG TAGGACTCAGACTCA PPA1703 1857910 - 1858440 + | hypothetical protein PPA1704 1859101 - 1858427 - | peptidase S51 family protein PPA1705 1860030 - 1859191 - | putative BirA bifunctional protein PPA1706 1860162 - 1860533 + | hypothetical protein TERM 882 1860879 - 1860902 + G 71 -7.4 -4.2074 | gap 1, opp_overlap 1860848, overlap 1860880 GGGTCATCACCGGTG TCGGCGCGATC CAT GGTCGC-CCGG TTTGTGTATTCAGCC PPA1707 1860626 - 1862200 + | propionyl-CoA carboxylase beta chain PPA1708 1862212 - 1862427 + | hypothetical protein TERM 883 1862728 - 1862696 - g 74 -12 -3.53811 | gap 1 CGCATTCTCGGCAAA CCTCACACTGCCGAG CGCG CCCGGCAGTG-GTGG CGTCGGATGCGCGGT PPA1709 1862405 - 1863070 + | Maf-like protein PPA1710 1864064 - 1863645 - | hypothetical protein PPA1711 1864261 - 1864995 + | short chain dehydrogenase PPA1712 1866004 - 1865099 - | phosphomethylpyrimidine kinase TERM 884 1865806 - 1865782 - G 72 -12.9 -3.01001 | overlap 1865777 1865785 GAGGGTCAAACGAGA CGATGCACGTC AAG GACGTGCATCC GAACACCCCGAGCTG TERM 885 1865803 - 1865785 - G 73 -13.2 -2.7314 | overlap 1865782 1865777 GGTCAAACGAGACGA TGCACGTC AAG GACGTGCA TCCGAACACCCCGAG TERM 886 1867183 - 1867169 - H 71 -10 -3.55946 | overlap 1867167 GGATGGCAAAGAAGA TGTGGC TCG GCCACA GGTCGATGACGTCGG PPA1715 1868063 - 1869463 + | hypothetical protein TERM 887 1869543 - 1869505 - T 100 -21.8 -3.03441 | gap 1, opp_overlap 1869505, overlap 1869487 CATCACCCCGTAACA CGGCGGGGGCGCCCACC ATCACA GGTGGACGCC-CCGCCG TTTCGCACCTCGTTC TERM 888 1869505 - 1869543 + T 100 -19.6 -3.56568 | gap 1, opp_overlap 1869487 1869505 CATCACCCCGTAACA CGGCGGGGGCGCCCACC ATCACA GGTGGACGCCC-CGCCG TTTCGCACCTCGTTC PPA1716 1870661 - 1869663 - | putative magnesium transport protein PPA1717 1871059 - 1870658 - | hypothetical protein PPA1718 1871132 - 1871389 + | hypothetical protein PPA1719 1871425 - 1873194 + | putative biotin-dependent acetyl/propionyl-CoA (acyl-CoA) carboxylase TERM 889 1873597 - 1873585 - g 79 -9.1 -4.1891 | CGCTCGTAACAGAAA CCCTC GAG GAGGG GCGGCATGCCATCGC TERM 890 1873926 - 1873945 + G 71 -5.6 -4.39329 | overlap 1873938 CTGGCTGTTGGCGGT CTCGGCCT AGTC GGGCTGGG TTTATTCTCTGCCCT PPA1720 1873290 - 1873976 + | hypothetical protein PPA1721 1875394 - 1874015 - | flavoprotein disulfide reductase TERM 891 1874237 - 1874215 - G 71 -6.3 -4.4009 | CGGGACGGCAGAAAA GCTTGACGA AACCG TCGTGAAGC CCCTGCATTTTGGCA PPA1722 1875582 - 1876394 + | purine nucleoside phosphorylase PPA1723 1876421 - 1878097 + | phosphoglucomutase/phosphomannomutase PPA1724 1879802 - 1878129 - | putative fatty acid--CoA ligase (AMP-binding enzyme) PPA1725 1879989 - 1880642 + | putative uridine kinase PPA1726 1880724 - 1882376 + | major facilitator superfamily permease PPA1727 1882586 - 1883296 + | putative DNA polymerase III epsilon subunit (exonuclease) PPA1728 1885076 - 1883298 - | methionyl-tRNA synthetase PPA1729 1886088 - 1885186 - | ribonuclease H PPA1730 1886525 - 1886085 - | cytidine deaminase PPA1731 1887858 - 1886500 - | ABC transporter associated permease TERM 892 1886827 - 1886817 - GR 78 -4.6 -4.7373 | CCAGGCCAGCAAAAA CGCC ACC GACG AGCACTGCAGACCAG TERM 893 1887648 - 1887631 - GR 80 -11.3 -3.72893 | opp_overlap 1887626 1887625 GAGGGCGTCAGTAAA GGCGAAG TGTG CTTCGCC TGACGTTTTGGTCAC PPA1732 1889126 - 1887855 - | ABC transporter associated permease PPA1733 1890712 - 1889123 - | ABC transporter ATP-binding protein TERM 894 1889651 - 1889637 - G 70 -3.5 -4.64334 | overlap 1889638 AACTCGCCAACAAAA CCGTC CCGCT GACGA TCCTCAGGCACGAAT TERM 895 1890104 - 1890088 - G 77 -7.9 -4.4078 | TGTGGGTAATGAAAA CGATGGC CCG GCCCTCG TCACGCAAGGTCTTC TERM 896 1890748 - 1890802 + r 100 -34.4 -2.70932 | opp_overlap 1890781 TGGTCCCTGATGTCG CGTGCGCCGACGACGCGCCGACCTCC ACA GGAAGTCGGCGCGTCGTCGTCTCACG TGGTTGGCCGCACAG PPA1734 1892107 - 1890848 - | basic membrane lipoprotein TERM 897 1891404 - 1891389 - G 74 -5.4 -4.56775 | ACGCCCTGGGAAAAA CCATCC ATGA AGATGG TGACGGTCGGGATCT PPA1735 1893415 - 1892174 - | hypothetical protein PPA1736 1894818 - 1893412 - | hypothetical protein PPA1737 1896094 - 1894946 - | hypothetical protein PPA1738 1898295 - 1896091 - | isocitrate dehydrogenase [NADP] PPA1739 1898491 - 1899342 + | formyltetrahydrofolate deformylase PPA1740 1899521 - 1900504 + | malate dehydrogenase TERM 898 1900549 - 1900518 - f 91 -17.4 -3.16881 | opp_overlap 1900518 GATCGACCCGACGAA CGGGCCCGGAAA ACGTCAAG TTTCCGGGCCCG TTCTGCGCGTCACGG TERM 899 1900518 - 1900549 + F 93 -17.4 -3.31144 | opp_overlap 1900518 GATCGACCCGACGAA CGGGCCCGGAAA ACGTCAAG TTTCCGGGCCCG TTCTGCGCGTCACGG PPA1741 1900932 - 1902275 + | putative propionaldehyde dehydrogenase / ethanolamine utilization protein EutE TERM 900 1902254 - 1902296 + T 71 -11.4 -3.24245 | gap 1, opp_overlap 1902276 1902277, overlap 1902272 1902278 CGCTCGTCGGCGGCG T-TGCGTCCTGGACGCACA TTAAGT TCTGCGTCCTGGACGCACA TTAAGTTCTGCGTCC TERM 901 1902278 - 1902321 + T 82 -13.9 -3.24245 | opp_overlap 1902277 1902276 1902301 1902302, overlap 1902254 1902272 1902297 1902303 GGACGCACATTAAGT TCTGCGTCCTGGACGCACA TTAAGT TCTGCGTCCTGGACGCACA TTAAGTTCTGCGTCC TERM 902 1902303 - 1902346 + T 82 -13.9 -3.24245 | opp_overlap 1902277 1902276 1902302 1902301 1902326, overlap 1902278 1902272 1902297 GGACGCACATTAAGT TCTGCGTCCTGGACGCACA TTAAGT TCTGCGTCCTGGACGCACA TTAAGTTCTGCGTCC PPA1742 1902763 - 1902425 - | hypothetical protein PPA1743 1903623 - 1902760 - | methylenetetrahydrofolate cyclohydrolase TERM 903 1902988 - 1903022 + g 72 -12.9 -3.06815 | gap 1, opp_overlap 1902975 AATGAGTCCCGGCGA CCCAGCAGCGCCGATA ATGA TGTCGGC-CTGCCGGG TGTGTTCGGCAAGGT PPA1744 1904603 - 1903638 - | hypothetical protein PPA1745 1904704 - 1907259 + | hypothetical protein PPA1746 1907271 - 1907897 + | hypothetical protein TERM 904 1907943 - 1907908 - T 100 -23.4 -3.30243 | opp_overlap 1907909, overlap 1907909 ACTGACCCCTCAGAA CCGTCAGGGGGTCCGA ACCA TCGGACCCCCTGACGT GTTCCAAGAAACCTC TERM 905 1907942 - 1907909 - T 100 -26.9 -2.57931 | opp_overlap 1907909, overlap 1907908 CTGACCCCTCAGAAC CGTCAGGGGGTCCGA ACCA TCGGACCCCCTGACG TGTTCCAAGAAACCT TERM 906 1907909 - 1907942 + T 100 -26.9 -3.01791 | opp_overlap 1907909 1907908 CTGACCCCTCAGAAC CGTCAGGGGGTCCGA ACCA TCGGACCCCCTGACG TGTTCCAAGAAACCT TERM 907 1907965 - 1907955 - T 71 -6.8 -4.15222 | ACGTGTTCCAAGAAA CCTC TAT GAGG AGCGCGGAATCAGTG purH 1909525 - 1907975 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purN 1910145 - 1909522 - | phosphoribosylglycinamide formyltransferase ribH 1910670 - 1910170 - | riboflavin synthase subunit beta PPA1750 1911983 - 1910667 - | riboflavin biosynthesis protein RibA TERM 908 1911774 - 1911796 + g 76 -9.8 -3.77196 | opp_overlap 1911773 CGCCGGCCACATGAG GGGCAGATCG AGC TGATCGGCCC TTTCCTCGGTCATGG PPA1751 1912576 - 1911977 - | riboflavin synthase subunit alpha PPA1752 1913579 - 1912584 - | riboflavin biosynthesis protein RibD PPA1753 1915358 - 1913865 - | hypothetical protein TERM 909 1914061 - 1914074 + g 84 -3.7 -5.28826 | GCCTTCTTCTTAGCG GCGCG GTTG CGAGC TTTTTTCTCGGCTTT TERM 910 1915497 - 1915439 - R 71 -12.9 -2.66316 | gap 5, opp_overlap 1915455, overlap 1915455 TCGGTTACCACACCA GGGCCGTCTGAATGCATGGAGCCCGGTCCC ACGT GGGACCGGGCTCCATGCATTCAGA-----C GGTCAAGGCGTCACT TERM 911 1915455 - 1915486 + r 100 -26 -2.52676 | opp_overlap 1915439 1915455 GGCCGTCTGAATGCA TGGAGCCCGGTCCC ACGT GGGACCGGGCTCCA TGCATTCAGACGGTC TERM 912 1915486 - 1915455 - R 100 -26 -2.52464 | opp_overlap 1915455, overlap 1915439 GGCCGTCTGAATGCA TGGAGCCCGGTCCC ACGT GGGACCGGGCTCCA TGCATTCAGACGGTC PPA1754 1916401 - 1915508 - | succinyl-CoA synthetase subunit alpha sucC 1917580 - 1916405 - | succinyl-CoA synthetase subunit beta PPA1756 1920239 - 1917807 - | ATP-dependent DNA helicase PPA1757 1920547 - 1920236 - | hypothetical protein PPA1758 1920676 - 1921638 + | outer membrane lipoprotein PPA1759 1921670 - 1922767 + | ABC transporter ATP-binding protein PPA1760 1922767 - 1923420 + | ABC transporter associated permease TERM 913 1923829 - 1923819 - g 78 -6.8 -4.59773 | CTTCATCTGGAAAAA CGAC GAA GTCG GGCGTCATTTTCGGC PPA1761 1923523 - 1924791 + | cardiolipin synthetase TERM 914 1925002 - 1925045 + G 77 -14.6 -2.78463 | gap 1, overlap 1925010 GCTAAGGCCATCATG CCGGGCAAGCAGGGCGGCGGG TTC CTCGTCACTCTGCTT-CTCGG TGTCATCGGCGCGGT TERM 915 1925010 - 1925038 + G 72 -10.9 -3.40299 | overlap 1925002 CATCATGCCGGGCAA GCAGGGCGGCGGG TTC CTCGTCACTCTGC TTCTCGGTGTCATCG PPA1762 1924939 - 1925202 + | hypothetical protein PPA1763 1925432 - 1925716 + | hypothetical protein TERM 916 1925949 - 1925908 - T 100 -22.4 -3.1739 | opp_overlap 1925910 1925913 ACATGACCGCACTAA CACGGCATGGCCCGCACC AAGAAA GGTGCGGGCCATGTCATG TTCACGGTGAGACGG TERM 917 1925910 - 1925947 + T 100 -19.2 -3.04144 | opp_overlap 1925908, overlap 1925913 ATGACCGCACTAACA CGGCATGGCCCGCACC AAGAAA GGTGCGGGCCATGTCA TGTTCACGGTGAGAC TERM 918 1925913 - 1925944 + T 100 -21.7 -2.74523 | opp_overlap 1925908, overlap 1925910 ACCGCACTAACACGG CATGGCCCGCACC AAGAAA GGTGCGGGCCATG TCATGTTCACGGTGA guaA 1927560 - 1925968 - | bifunctional GMP synthase/glutamine amidotransferase protein PPA1765 1927718 - 1928290 + | serine acetyltransferase PPA1766 1928646 - 1928299 - | chorismate mutase PPA1767 1929807 - 1928704 - | inositol-5-monophosphate dehydrogenase TERM 919 1929354 - 1929343 - G 72 -2.2 -4.77438 | gap 1, overlap 1929344 ACGGATGACGAAAAA GTCCG CCC CGG-C ATTGACCACCGTCTC PPA1768 1931355 - 1929841 - | IMP dehydrogenase / GMP reductase TERM 920 1930573 - 1930563 - G 78 -6.8 -4.63527 | CGATCATGTCAAAAA CACC CTG GGTG TGACCATGAGCGGTG PPA1769 1932895 - 1931453 - | hypothetical protein PPA1770 1933262 - 1935016 + | sodium:alanine symporter family protein TERM 921 1935073 - 1935028 - T 71 -11.1 -3.30771 | gap 1, overlap 1935029 GTAGATCCTGGAGAA TCGGGGCCCCTCGCAAT-CCGC AAA GCTTCATTGCGAGGAGCCCCAC TCCGCACACAGATTG TERM 922 1935072 - 1935029 - T 78 -14.6 -2.58249 | gap 1, overlap 1935028 TAGATCCTGGAGAAT CGGGGCCCCTCGCAAT-CCGC AAA GCTTCATTGCGAGGAGCCCCA CTCCGCACACAGATT TERM 923 1935116 - 1935084 - T 100 -21.4 -2.87931 | opp_overlap 1935079, overlap 1935086 CCCACTCCGCACACA GATTGGCCGGCCGA AGGGA CCGGCCGGCCAATC GTCGATCTTCCCGAT TERM 924 1935114 - 1935086 - T 100 -18.2 -2.9914 | opp_overlap 1935079, overlap 1935084 CACTCCGCACACAGA TTGGCCGGCCGA AGGGA CCGGCCGGCCAA TCGTCGATCTTCCCG PPA1771 1935826 - 1935137 - | hypothetical protein TERM 925 1936025 - 1935985 - R 100 -18.9 -2.9039 | opp_overlap 1935977, overlap 1936007 ACATCAGCCCAGATA TGGCGAGGGCCCCGAACCA CAA CGGTCCGGGGCCCCCGACG CGACGAGGTCACTTG groEL 1937629 - 1936034 - | chaperonin GroEL TERM 926 1937461 - 1937477 + g 74 -12.3 -3.23216 | GGTCGACCTCCTTGG CGACGGT CAC ACCGTCG TTGGTGATGGTCGGG TERM 927 1937487 - 1937501 + g 81 -5.6 -4.82901 | CCGTCGTTGGTGATG GTCGGG GCT CCCCAC TTTTTGTCGAGGACA TERM 928 1937537 - 1937523 - G 71 -9.2 -3.77808 | TCGAGGACAACATAA CGGCCC TTA GGACCG AGGGTCACCTTGACG PPA1773 1937937 - 1937641 - | 10 kDa chaperonin PPA1774 1939147 - 1938143 - | hypothetical protein TERM 929 1939119 - 1939105 - G 76 -6.4 -4.48987 | overlap 1939106 1939110 1939112 GCGCGATAATCAAAA CGAGAC AGC GTCTCA TATGACGCGAAACAT PPA1775 1940061 - 1939267 - | hypothetical protein PPA1776 1941265 - 1940066 - | hypothetical protein PPA1777 1941294 - 1941941 + | hypothetical protein PPA1778 1942720 - 1941968 - | Fe(III) dicitrate ABC transporter, ATP-binding protein PPA1779 1943811 - 1942717 - | Fe(III) dicitrate ABC transporter, permease PPA1780 1944988 - 1943819 - | periplasmic binding protein PPA1781 1945605 - 1945114 - | putative 7,8-dihydro-8-oxoguanine-triphosphatase PPA1782 1946762 - 1945719 - | putative O-sialoglycoprotein endopeptidase PPA1783 1947222 - 1946755 - | ribosomal-protein-alanine acetyltransferase PPA1784 1947875 - 1947219 - | M22 family peptidase PPA1785 1948768 - 1947875 - | nucleotide-binding protein (P-loop hydrolase) TERM 930 1949493 - 1949438 - g 72 -12.7 -3.10164 | gap 2 TCAGGCATTAGCGAA CGACCCCCTCAATCTG-CTAGCC-GTC GAAG GACAGGCCAACCAGAACAAGGGGGCCG GGGACGCGGCGACAT PPA1786 1948947 - 1949660 + | hypothetical protein PPA1787 1951772 - 1949670 - | ATP-dependent RNA helicase TERM 931 1951578 - 1951558 - G 74 -6.1 -4.57569 | opp_overlap 1951576, overlap 1951559 CGATCCTGGGAAAAA CGGCGGT CTCTGCT ACCGCCA GCGTCATCGCGACGC PPA1788 1951787 - 1951951 + | hypothetical protein PPA1789 1954463 - 1952124 - | putative ABC transporter-associated permease PPA1790 1955203 - 1954463 - | ABC transporter ATP-binding protein PPA2362 1955682 - 1955197 - | hypothetical protein PPA1791 1955838 - 1956929 + | glycosyl transferase PPA1792 1958418 - 1956973 - | hypothetical protein acpS 1958892 - 1958509 - | 4'-phosphopantetheinyl transferase TERM 932 1958934 - 1958963 + r 100 -20.7 -2.64735 | opp_overlap 1958934 CGGCACATCACCAAA GGTGCCCCCGGGG CCAA CGCCGGGGGCACC TAGTCTGAGTGAGCT TERM 933 1958963 - 1958934 - R 100 -20.7 -3.81951 | opp_overlap 1958934 CGGCACATCACCAAA GGTGCCCCCGGGG CCAA CGCCGGGGGCACC TAGTCTGAGTGAGCT PPA1794 1960891 - 1958978 - | D-fructose-6-phosphate amidotransferase PPA1796 1961005 - 1962024 + | triacylglycerol lipase precursor PPA1799 1963291 - 1964274 + | pantothenate kinase PPA1800 1964966 - 1964319 - | hypothetical protein TERM 934 1964492 - 1964454 - G 83 -16.1 -3.05596 | opp_overlap 1964466 CACGCTGCCACCGAA CTCGTTGGCGATGGG-GCG CCC CGCTCCCTTCGCCAACG-G CCATGACGACACCAG PPA1801 1966430 - 1965078 - | phosphoglucomutase/phosphomannomutase TERM 935 1966026 - 1966006 - G 80 -14.7 -3.01791 | ACCTTGTCGCCAATA GGGCGAGCC CAC GGCTCACCC ATACGCTGCTCAATG TERM 936 1966640 - 1966597 - R 100 -13.8 -4.61231 | opp_overlap 1966587 1966599, overlap 1966598 1966599 TGAGACCCCGAAAAA CGCCTCGGGGTGGTTCTCCC CTGA GGGACAACCACCCCGAGTTC CAGAGAAAGACCGGA TERM 937 1966639 - 1966598 - R 93 -17.3 -3.36256 | opp_overlap 1966587 1966599, overlap 1966597 1966599 GAGACCCCGAAAAAC GCCTCGGGGTGGTTCTCCC CTGA GGGACAACCACCCCGAGTT CCAGAGAAAGACCGG TERM 938 1966638 - 1966599 - R 100 -20.8 -2.61272 | opp_overlap 1966587 1966599, overlap 1966598 1966597 AGACCCCGAAAAACG CCTCGGGGTGGTTCTCCC CTGA GGGACAACCACCCCGAGT TCCAGAGAAAGACCG rpsI 1967177 - 1966656 - | 30S ribosomal protein S9 rplM 1967643 - 1967200 - | 50S ribosomal protein L13 PPA1805 1971155 - 1967907 - | endo-beta-N-acetylglucosaminidase family protein TERM 939 1968517 - 1968536 + g 76 -6.4 -4.45083 | gap 1, overlap 1968517 1968518 1968520 CCACGCACCGATCCG C-CGCGACG AAT CGTCGTGAG TTTTCTGGATGTACC PPA1806 1971306 - 1972211 + | hypothetical protein PPA1807 1972624 - 1972331 - | hypothetical protein TERM 940 1972599 - 1972588 - G 70 -4.4 -4.4846 | TAACGGAACAAGAAA CAAC AGGA GTTG CGGTAGACATGTCGA TERM 941 1972713 - 1972688 - H 71 -12.7 -2.66274 | gap 1, overlap 1972687 TCGCCCACAAGCAAG GCTAGGCTGATC TCA GATC-GCCTAGC GACAAGGAGTGACGC PPA1808 1972797 - 1973741 + | methyltransferase truA 1973738 - 1974577 + | tRNA pseudouridine synthase A PPA1810 1974574 - 1975194 + | hypothetical protein PPA1812 1975263 - 1976525 + | ABC transporter-associated permease TERM 942 1976812 - 1976800 - g 70 -10.5 -3.49475 | opp_overlap 1976800 TGTAGTCGGACAGAA CCCGG TTG CCGGG TTCGTTACCGATACC PPA1813 1976522 - 1978177 + | ABC transporter, ATP-binding protein PPA1814 1978174 - 1978935 + | putative ABC transporter-associated permease fabG 1979749 - 1978988 - | 3-ketoacyl-(acyl-carrier-protein) reductase PPA1816 1981455 - 1979842 - | ABC transporter associated permease TERM 943 1981165 - 1981142 - G 71 -8 -4.02108 | CCGACGACAACGAAA GCGGGCATGA GTTC CCTCGCCCGC CTCGAAAAGACCGCA PPA1817 1982270 - 1981437 - | ABC transporter ATP-binding protein TERM 944 1982425 - 1982400 - H 75 -9 -3.97043 | gap 1, overlap 1982402 CGGAACATATAACAA CA-CGTGGGGC CACAC GCCCCACGACG CATAACCTTACAGTT TERM 945 1982422 - 1982402 - H 83 -14 -3.56668 | overlap 1982400 GAACATATAACAACA CGTGGGGC CACAC GCCCCACG ACGCATAACCTTACA PPA2364 1982509 - 1983003 + | hypothetical protein TERM 946 1983513 - 1983496 - g 76 -6.3 -4.61231 | opp_overlap 1983484 TGACAGCTTCAAAAA GCAGTTT GAGG AAACCGC TAAGGGCGTTCAGGG PPA1818 1983161 - 1983778 + | superoxide dismutase [Mn/Fe] TERM 947 1983818 - 1983847 + F 85 -17.2 -2.62515 | TATTTTTCATCGTCG CTGGCTGCGTCC CCACCC GGACGCGGCCAG TGATGTGCCCAGGTT PPA1819 1984010 - 1984534 + | beta-galactosidase PPA1820 1984531 - 1988787 + | beta-galactosidase fused to beta-N-acetylhexosaminidase PPA1821 1989016 - 1990425 + | putative sialidase PPA1822 1990761 - 1992134 + | organic anion transporter family protein PPA1823 1992782 - 1992150 - | hypothetical protein PPA1824 1993999 - 1992782 - | glycosyl transferase TERM 948 1994068 - 1994095 + r 100 -21.4 -4.07885 | opp_overlap 1994068 CACAGGCATAATAAA CGCCGGTCCTCA CTAG TGAGGACCGGCG TTTTGAAGGAGGATC TERM 949 1994095 - 1994068 - R 100 -21.4 -4.34488 | opp_overlap 1994068 CACAGGCATAATAAA CGCCGGTCCTCA CTAG TGAGGACCGGCG TTTTGAAGGAGGATC PPA1825 1994645 - 1994109 - | 50S ribosomal protein L17 TERM 950 1994913 - 1994939 + r 75 -12.3 -3.18912 | opp_overlap 1994919, overlap 1994914 CAACCCACGCGGGGG ATGCAAGGGGG TCGCC CCCCCTTGCAC TTAATAAATCAGTAC TERM 951 1994914 - 1994938 + r 84 -15.8 -2.51133 | opp_overlap 1994919, overlap 1994913 AACCCACGCGGGGGA TGCAAGGGGG TCGCC CCCCCTTGCA CTTAATAAATCAGTA PPA1826 1995964 - 1994948 - | DNA-directed RNA polymerase subunit alpha TERM 952 1995055 - 1995065 + g 76 -6.8 -4.45664 | TGAGGGCTAGGCCAA GCTC GGT GAGC TTTTCCTTGACTTCG TERM 953 1995951 - 1995965 + g 75 -2.1 -4.94992 | GTGAGAGTGGGGCGC TGTGC AATGA GCATA TTTTTCTACCTTTCG rpsD 1996815 - 1996210 - | 30S ribosomal protein S4 PPA1828 1997253 - 1996846 - | 30S ribosomal protein S11 rpsM 1997696 - 1997325 - | 30S ribosomal protein S13 TERM 954 1997687 - 1997706 + g 76 -5.6 -4.62803 | overlap 1997691 GGTCGACTCCGATGA GGCGTGCC ATGT GGCATCCC TTTCTTGTTCTTTCG rpmJ 1998188 - 1998075 - | 50S ribosomal protein L36 PPA1832 1998488 - 1998267 - | translation initiation factor IF-1 PPA1833 1999542 - 1998703 - | methionine aminopeptidase adk 2000113 - 1999544 - | adenylate kinase secY 2001429 - 2000110 - | preprotein translocase subunit SecY TERM 955 2000782 - 2000767 - G 71 -6.8 -4.19624 | overlap 2000768 CATGCTGAAGATAAA CCAGGC GTGA GCCTGA CCGGCACCATTTCGA PPA1836 2001599 - 2002237 + | hypothetical protein PPA1837 2003435 - 2002227 - | membrane protein, putative permease TERM 956 2002300 - 2002314 + g 70 -4.2 -4.57073 | GCGTGAATACCAACC GCCTGA CGA TCACGC TTTTTGACGCGCATG PPA1838 2003651 - 2003493 - | hypothetical protein PPA1839 2004411 - 2003665 - | glycerophosphoryl diester phosphodiesterase TERM 957 2004461 - 2004433 - R 82 -13.9 -3.28712 | TTTCCTTGCGTATAA CAGTTGTGCCAAC GTC GGCGGCACAACTG TAGCAGAACCTTGCG TERM 958 2004511 - 2004480 - R 74 -11.6 -3.56099 | opp_overlap 2004482, overlap 2004482 CAGAACCTTGCGAAA CACCATGCCGGGAA AACA TTCCCAGCACGGTT CTCAACACAGATATG TERM 959 2004509 - 2004482 - R 87 -14.2 -3.35522 | opp_overlap 2004482, overlap 2004480 GAACCTTGCGAAACA CCATGCCGGGAA AACA TTCCCAGCACGG TTCTCAACACAGATA PPA1840 2006236 - 2004533 - | extracellular solute-binding transport protein, putative oligopeptide-binding protein TERM 960 2006276 - 2006258 - R 79 -13.2 -3.19192 | CTCCAGTGAAGTGAA TGGCAGGA CGC TCCTGCCA TCATCCGGCCTCTGC TERM 961 2006423 - 2006388 - R 76 -11.9 -3.44284 | gap 1, overlap 2006386 2006389 CGTCGAGGAAGAACA TTGGA-GGGCCCGGCA ACCTA TGCCGAGCCCCTCCAC AATCCATCAGATCTT TERM 962 2006422 - 2006389 - R 81 -15.4 -2.66249 | gap 1, overlap 2006388 2006386 GTCGAGGAAGAACAT TGGA-GGGCCCGGCA ACCTA TGCCGAGCCCCTCCA CAATCCATCAGATCT PPA1841 2006678 - 2006430 - | hypothetical protein PPA2365 2007002 - 2006718 - | hypothetical protein TERM 963 2007111 - 2007169 + r 100 -23.5 -2.72799 | gap 2, opp_overlap 2007117 ATTGTGCTGTCCGTT --GATAGACGACGGGAGGGATGGGAAACA CTG TGTTTCCCATCCCTCCCGTCGTCAAGCGG TCGTATCTATGACGA TERM 964 2007161 - 2007117 - R 100 -36.1 -2.87132 | opp_overlap 2007111 CTGTCCGTTGATAGA CGACGGGAGGGATGGGAAACA CTG TGTTTCCCATCCCTCCCGTCG TCAAGCGGTCGTATC rplO 2007632 - 2007192 - | 50S ribosomal protein L15 rpmD 2007816 - 2007634 - | 50S ribosomal protein L30 rpsE 2008463 - 2007816 - | 30S ribosomal protein S5 TERM 965 2008540 - 2008494 - R 79 -12.9 -3.28712 | gap 2, opp_overlap 2008501 TTTCGTGGGTCAGAA GTCGAGACCGGCCTCGCGGGCCG CAT CGGCCAGCGCGGC-GATC-CGCC CGTGGTACTGGTTTC PPA1845 2008871 - 2008488 - | 50S ribosomal protein L18 rplF 2009415 - 2008873 - | 50S ribosomal protein L6 TERM 966 2009477 - 2009452 - R 80 -14.7 -2.79183 | opp_overlap 2009450 TCGACGGTCACCACA CGTAGGCGAGG ACTT CCCCGCCCACG GACTTCTCATGGGCC rpsH 2009851 - 2009444 - | 30S ribosomal protein S8 rpsN 2010196 - 2010011 - | 30S ribosomal protein S14 rplE 2010836 - 2010204 - | 50S ribosomal protein L5 PPA1851 2011201 - 2010833 - | 50S ribosomal protein L24 PPA1852 2011570 - 2011202 - | 50S ribosomal protein L14 TERM 967 2012095 - 2012142 + r 73 -12.6 -2.82834 | opp_overlap 2012102 2012105 CTCCCCCTGTCCCCA CACACAACAAGGCGACCCACCC TTTC GGATGGGTCGCCTTGACGTCAG TGTGGTGATCGCCTC TERM 968 2012135 - 2012102 - R 100 -23.3 -3.58726 | opp_overlap 2012095, overlap 2012105 TGTCCCCACACACAA CAAGGCGACCCACCC TTTC GGATGGGTCGCCTTG ACGTCAGTGTGGTGA TERM 969 2012132 - 2012105 - R 100 -19.2 -3.92996 | opp_overlap 2012095, overlap 2012102 CCCCACACACAACAA GGCGACCCACCC TTTC GGATGGGTCGCC TTGACGTCAGTGTGG PPA1853 2012439 - 2012167 - | 30S ribosomal protein S17 PPA1855 2012675 - 2012442 - | 50S ribosomal protein L29 rplP 2013094 - 2012675 - | 50S ribosomal protein L16 rpsC 2013905 - 2013096 - | 30S ribosomal protein S3 PPA1858 2014368 - 2013907 - | 50S ribosomal protein L22 TERM 970 2014346 - 2014358 + g 71 -5.5 -4.3129 | overlap 2014341 AGGGCGGCGCGACGG CTGGG CCT CTCAG TTTTGCTCATGAATC PPA1859 2014667 - 2014386 - | 30S ribosomal protein S19 rplB 2015519 - 2014683 - | 50S ribosomal protein L2 rplW 2015854 - 2015546 - | 50S ribosomal protein L23 PPA1862 2016756 - 2015851 - | 50S ribosomal protein L4 TERM 971 2016697 - 2016709 + g 73 -10.5 -3.68222 | GTCACCGGGAAGCTC GGCCG ATC CGGCC TTCTTACCCTTGACG PPA1863 2017424 - 2016753 - | 50S ribosomal protein L3 rpsJ 2017747 - 2017436 - | 30S ribosomal protein S10 PPA1866 2018260 - 2020221 + | 8-amino-7-oxononanoate synthase PPA1867 2021434 - 2020202 - | hypothetical protein TERM 972 2020282 - 2020253 - G 76 -14.9 -2.52987 | overlap 2020252 GTAATACTGATGAAG GCGGGCCTCGGTG GATC CACGGCGGCCCGC ATAGTCGGGCAACCA TERM 973 2020631 - 2020618 - G 70 -3.7 -4.62069 | CGCTCACGGTAAAAA CCACG AGGC CGAGG AAGGACGTTCGTCCC TERM 974 2021343 - 2021311 - G 100 -13.3 -4.42386 | CCGCTATCCACAAAA CCCAGCCGTGGTCGA CAT TCGGCCCCCGCTGGG ACCACAGCAGAAGGA PPA1868 2021881 - 2021552 - | hypothetical protein PPA1869 2023374 - 2021881 - | glutamyl-tRNA synthetase PPA1870 2023428 - 2025125 + | glutaminyl-tRNA synthetase PPA1871 2025228 - 2027174 + | 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor TERM 975 2027232 - 2027188 - g 83 -15.7 -3.03441 | opp_overlap 2027193 2027195 GACTACGTGTGAACA TTGTTAAGCCTCGGCCCACCT CAA AGGTAGGCCGAGGCTCTTCAT TATCCGGGCAACGTG TERM 976 2027193 - 2027227 + G 100 -18.6 -3.44146 | opp_overlap 2027188, overlap 2027195 CGTGTGAACATTGTT AAGCCTCGGCCCACCT CAA AGGTAGGCCGAGGCTC TTCATTATCCGGGCA TERM 977 2027195 - 2027225 + G 100 -21.2 -3.29325 | opp_overlap 2027188, overlap 2027193 TGTGAACATTGTTAA GCCTCGGCCCACCT CAA AGGTAGGCCGAGGC TCTTCATTATCCGGG TERM 978 2027360 - 2027412 + G 75 -13.5 -2.85565 | opp_overlap 2027388, overlap 2027357 GTACCCGGCTCGGCT GGCCAACCGGAGTTGGC-CGGCGAA AGTAC TGCGCCGTGCCAGCATCG-TTGGCC TCATCTTTGCCCTGT PPA1872 2027181 - 2029046 + | membrane-spanning protein tuf 2030363 - 2029170 - | elongation factor Tu TERM 979 2030416 - 2030440 + r 75 -9.3 -3.85698 | overlap 2030417 GACGCGTCATGTGGA TATTCCTGGGA GGT TCCCAGGAACG TTTCTGGACGGGCCC PPA1874 2033934 - 2030632 - | hypothetical protein TERM 980 2030789 - 2030815 + g 73 -10.8 -3.62597 | TGCCCGTTCTGAGCA GCCTGCTGACGC GCA GCCTCAGCACGC TTCTTACGCCATGCC TERM 981 2032762 - 2032734 - G 74 -11 -3.44051 | gap 1 CCCCCAGCATTACAA GCCCTACCAGGAC CAGT GCCCCGG-AGGGC ACAAACCACAGGACA TERM 982 2034067 - 2034107 + r 100 -35.7 -3.14564 | opp_overlap 2034067 CTTGGGCTTCATGAA CGTTTTGGCCCGGCCCCAC ATT GTGGGGCCGGGCCAAAACG TTCATGAAAAAGTGA TERM 983 2034107 - 2034067 - R 100 -35.7 -3.14132 | opp_overlap 2034067 CTTGGGCTTCATGAA CGTTTTGGCCCGGCCCCAC ATT GTGGGGCCGGGCCAAAACG TTCATGAAAAAGTGA PPA1875 2036218 - 2034125 - | elongation factor G TERM 984 2036278 - 2036295 + rH 81 -9.1 -4.4009 | opp_overlap 2036278 CTCGACGCAGATGAA CCTGTGG TGAA CCGCAGG TTTTCTGGGCTGGAC PPA1876 2036821 - 2036351 - | 30S ribosomal protein S7 rpsL 2037196 - 2036825 - | 30S ribosomal protein S12 PPA1877 2036363 - 2037352 + | hypothetical protein PPA1879 2038041 - 2037511 - | hypothetical protein TERM 985 2038163 - 2038142 - R 100 -17.3 -3.72231 | opp_overlap 2038142 TCAGATAGTGAAGAA CCCCGCGTC CTCA GACGCGGGG TTTCACAGACAAGAA TERM 986 2038142 - 2038163 + r 95 -17.3 -3.53012 | opp_overlap 2038142 TCAGATAGTGAAGAA CCCCGCGTC CTCA GACGCGGGG TTTCACAGACAAGAA PPA1880 2039093 - 2038194 - | putative adhesion or S-layer protein PPA1881 2039809 - 2039396 - | hypothetical protein PPA1882 2040973 - 2039927 - | hypothetical protein TERM 987 2041135 - 2041104 - R 100 -24.6 -4.65895 | opp_overlap 2041089, overlap 2041085 2041084 CGCCTCATGCAAAAA GCCTCTCCTCCCTC ACAT GAGGGAGGAGAGGC TCGCAGTCGGCGTTG PPA1883 2045039 - 2041158 - | DNA-directed RNA polymerase subunit beta' TERM 988 2042574 - 2042558 - G 95 -12.3 -4.17023 | TGAAGTACTCCAAAA CCGTGAG GCC CTCACGG AAGTTCGACTTAATC TERM 989 2044334 - 2044356 + g 82 -12.1 -3.62046 | AGAGAATCTCGTCAC CCTCAAGGT CCTGA ACCTTGAGG TTCTTGAAGCGATCC rpoB 2048687 - 2045208 - | DNA-directed RNA polymerase subunit beta TERM 990 2048771 - 2048749 - R 85 -11.3 -3.96148 | overlap 2048750 TGGGGGCATGACAAA CCGCCCATG TCAAG CATGGGCGA TCGCTGGCAATGGTG TERM 991 2048770 - 2048750 - R 74 -12.6 -2.97475 | overlap 2048749 GGGGGCATGACAAAC CGCCCATG TCAAG CATGGGCG ATCGCTGGCAATGGT TERM 992 2048916 - 2048966 + r 83 -12.4 -3.86897 | opp_overlap 2048924 2048943 2048945 GATGGGGGTTTACCT GCCAAGCACGTGGGGCCACCCCTC AAA GAGGAGTGGCCCCACGTAATGAAC TTTGTAAGCAGTCAC TERM 993 2048958 - 2048924 - R 100 -28 -2.71731 | opp_overlap 2048916, overlap 2048943 2048945 TTTACCTGCCAAGCA CGTGGGGCCACCCCTC AAA GAGGAGTGGCCCCACG TAATGAACTTTGTAA rplL 2049378 - 2048986 - | 50S ribosomal protein L7/L12 rplJ 2050006 - 2049392 - | 50S ribosomal protein L10 TERM 994 2050112 - 2050087 - R 90 -8.1 -4.98911 | GAGGACAAAAAGAAA CCCCGGTGCGC AGGC GCACGACGGGG TAATAAATCATCTCG TERM 995 2050424 - 2050392 - R 100 -23.5 -3.76373 | CGCGGAAGACGCAAA GACGGCCCCCGCAAC GTC GTTGTGGGGGCCGTC AACAGTCAGTCAGTC rplA 2051132 - 2050434 - | 50S ribosomal protein L1 PPA1890 2051653 - 2051222 - | 50S ribosomal protein L11 PPA1891 2052694 - 2051783 - | transcription antitermination protein NusG TERM 996 2052229 - 2052243 + g 77 -11.4 -3.56821 | TCTCGACGACCTCCT CGGTCG GGA CGACCG TTTCAAAGATGTAGT TERM 997 2052596 - 2052541 - G 81 -13.3 -3.39449 | gap 1, opp_overlap 2052580, overlap 2052535 CGTCACCAAGATCAA GGTCGATCTCGGGCTCCTCAGCAGAG TCCTC CTC-GCTGAGGTCCCCAAGGTCGATC TCGACCTCGTCGTCC PPA1892 2053368 - 2052718 - | putative SecE/Sec61-gamma subunit of protein translocation complex TERM 998 2053788 - 2053742 - R 75 -8.6 -3.96148 | opp_overlap 2053742 2053741 2053766 2053787, overlap 2053744 2053747 GTTGGGCATCAGAAA TATGACAGCGGCCGCGCACC GTTACCG GGTGCAGGGCCGCTGTAAGC CTTTCATCAGGCTGC TERM 999 2053786 - 2053744 - R 88 -15.6 -3.57406 | opp_overlap 2053742 2053741 2053766, overlap 2053742 2053747 TGGGCATCAGAAATA TGACAGCGGCCGCGCACC GTTACCG GGTGCAGGGCCGCTGTAA GCCTTTCATCAGGCT TERM 1000 2053783 - 2053747 - R 90 -17.3 -2.91255 | opp_overlap 2053742 2053741 2053766, overlap 2053744 2053742 GCATCAGAAATATGA CAGCGGCCGCGCACC GTTACCG GGTGCAGGGCCGCTG TAAGCCTTTCATCAG PPA1893 2055083 - 2053818 - | aminotransferase TERM 1001 2055163 - 2055121 - R 71 -11.3 -3.27951 | gap 1, overlap 2055119 CAGTTCAGGACAACA CGCGACCCTCCA-GCCCTGC TGCA GTAAGGCTTGAAGGGTCGTG GCGTCTGGCAATGCT murB 2056317 - 2055187 - | UDP-N-acetylenolpyruvoylglucosamine reductase PPA1895 2056730 - 2056314 - | MaoC family protein PPA1896 2057155 - 2056727 - | hypothetical protein TERM 1002 2057273 - 2057239 - R 76 -12.8 -3.14745 | opp_overlap 2057235 2057242, overlap 2057237 2057235 2057233 2057242 TGCTCATAACACACA GCACGAGGGGCCGCCT CTA AAGCAGCCCCTCGTTT AAGGTTCTTGGGTTC TERM 1003 2057270 - 2057242 - R 100 -18.9 -2.77433 | opp_overlap 2057242 2057235, overlap 2057239 2057237 2057235 2057233 TCATAACACACAGCA CGAGGGGCCGCCT CTA AAGCAGCCCCTCG TTTAAGGTTCTTGGG TERM 1004 2057242 - 2057270 + r 95 -14.5 -3.72051 | opp_overlap 2057239 2057237 2057235 2057233 2057242, overlap 2057235 TCATAACACACAGCA CGAGGGGCCGCCT CTA AAGCAGCCCCTCG TTTAAGGTTCTTGGG rpmG 2057470 - 2057300 - | 50S ribosomal protein L33 TERM 1005 2057938 - 2057906 - H 77 -12 -3.57144 | opp_overlap 2057910, overlap 2057907 CCGGTTATGGCGAAA CCAACCCCCGAATC CATCC GACCCGGGGGTTGC GTGGCAGGTGTTGGA TERM 1006 2057937 - 2057907 - H 83 -15.5 -2.74144 | opp_overlap 2057910, overlap 2057906 CGGTTATGGCGAAAC CAACCCCCGAATC CATCC GACCCGGGGGTTG CGTGGCAGGTGTTGG PPA1898 2058192 - 2059085 + | exodeoxyribonuclease III PPA1899 2060013 - 2059087 - | enoyl-CoA hydratase/isomerase family protein PPA1900 2061699 - 2060119 - | hypothetical protein PPA1901 2062004 - 2061696 - | NADH dehydrogenase subunit PPA1902 2062585 - 2062001 - | NADH dehydrogenase subunit PPA1903 2062980 - 2062582 - | NADH dehydrogenase subunit TERM 1007 2063588 - 2063565 - g 84 -3.1 -5.16472 | gap 1, overlap 2063567 AAAAATCTCAAAAAA GC-CGGATAC ACCGA GGATCCGCGC AATGACGGCACGCTG TERM 1008 2064285 - 2064261 - g 76 -10.8 -3.73775 | gap 1, opp_overlap 2064259 GGTATGCCGACCAAA CCTG-AGCAGG CCGA CCTGCTACAGG CAATGTTTGGACGCA PPA1904 2063178 - 2065100 + | pyruvate:ferredoxin oxidoreductase (alpha subunit) PPA1905 2065102 - 2066187 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 1009 2067758 - 2067778 + G 74 -3.2 -4.77567 | gap 1 CAACGACCTAGACTT CACCAC-CG TCGT CGAGAGGTG TTTTCTTGTCAAGAT TERM 1010 2067881 - 2067865 - g 74 -6.5 -4.32034 | overlap 2067868 CCACGATGACGAAAA CGACGAC ACT GTTGTCG CATATTCAGCAGCGG TERM 1011 2068732 - 2068708 - g 78 -9.9 -3.97209 | CCAACCAAGACCAAA CCGACACCGAC CAC GACGGCATCGG AGACGCCTGCGACCC PPA1906 2066712 - 2068775 + | hypothetical protein PPA1907 2068772 - 2069347 + | protein associated to putative adhesion protein PPA1908 2069415 - 2070011 + | protein associated to putative adhesion protein PPA1909 2070668 - 2072650 + | M13 family metallopeptidase TERM 1012 2072685 - 2072657 - T 90 -16.8 -3.40522 | opp_overlap 2072657 ATCTGGTGATGATAA TGCCCCCGAGTC CCACC AACTCGGGGGCA TTTCTTTTGCTCAGG TERM 1013 2072657 - 2072685 + T 100 -16.1 -4.72007 | opp_overlap 2072657 ATCTGGTGATGATAA TGCCCCCGAGT CCCACCA ACTCGGGGGCA TTTCTTTTGCTCAGG PPA1910 2073941 - 2072718 - | ABC transporter permease PPA1911 2074507 - 2073938 - | ABC transporter, ATP-binding PPA1913 2075493 - 2074564 - | hypothetical protein PPA1914 2075659 - 2075901 + | hypothetical protein PPA1915 2075901 - 2076722 + | ABC transporter, ATP-binding protein PPA1916 2076719 - 2078230 + | ABC transporter permease PPA1917 2078227 - 2078538 + | hypothetical protein PPA1918 2078618 - 2079049 + | hypothetical protein PPA1919 2079986 - 2079066 - | citrate lyase beta chain PPA1920 2080804 - 2080022 - | precorrin 6A synthase PPA1921 2081809 - 2080835 - | heptaprenyl diphosphate synthase component II PPA1922 2083618 - 2082002 - | NADH dehydrogenase subunit N PPA1923 2085108 - 2083615 - | NADH dehydrogenase subunit M TERM 1014 2085052 - 2085007 - G 84 -8.9 -4.57755 | gap 1 AGTGACCAGAGAAAA CACCATGCCGGTGGCTCGGGCC GCA GCCCCGCGC-AGCATCATGGTG ATAACGCCGCCGACG PPA1924 2087012 - 2085126 - | NADH dehydrogenase subunit L TERM 1015 2086916 - 2086869 - G 74 -6.9 -4.33248 | gap 1, overlap 2086870 CAACCCGATAACAAA GGCGACGATTGGGGCCACAGTG GCCAA CAC-ATGTCCCCACGCGTCGCT GCGGCGTCCCAACAC PPA1925 2087322 - 2087023 - | NADH dehydrogenase subunit K PPA1926 2088173 - 2087319 - | NADH dehydrogenase subunit J PPA1928 2088769 - 2088173 - | NADH dehydrogenase subunit I PPA1929 2090091 - 2088769 - | NADH dehydrogenase subunit H TERM 1016 2089013 - 2088994 - G 78 -4.2 -4.78107 | opp_overlap 2088994 GACGACCACCAAAAA GACCGGGT TTCG ACCCCATC CTTGATTGATGACGG PPA1930 2092526 - 2090088 - | NADH dehydrogenase subunit G PPA1931 2093857 - 2092523 - | NADH dehydrogenase I chain F TERM 1017 2093207 - 2093225 + g 76 -10.3 -3.72324 | CAGGATCGACGGCAC CGTCGAG ATGGA CTCGACG TTGTTAATGACCGTC PPA1932 2094639 - 2093854 - | NADH dehydrogenase subunit E PPA1933 2095937 - 2094636 - | NADH dehydrogenase subunit D PPA1934 2096761 - 2095937 - | NADH dehydrogenase subunit C PPA1935 2097315 - 2096758 - | NADH dehydrogenase subunit B PPA1936 2097768 - 2097409 - | NADH dehydrogenase subunit A PPA1938 2099151 - 2097889 - | putative electron transfer oxidoreductase TERM 1018 2097989 - 2097963 - G 82 -14.6 -3.23216 | overlap 2097976 CTTTAGCATCAGTAA GGTTTGCCAACA ATT TGTTGACAAACC TCATGAGTCGACGAC PPA1939 2099382 - 2099867 + | hypothetical protein TERM 1019 2100419 - 2100395 - g 71 -9.2 -3.78775 | gap 1, opp_overlap 2100416, overlap 2100396 CTCCCCATCAGCAAA GCGTGCCCCGG CCCC CCGGGGC-CGT GACGGTACGTGACGG TERM 1020 2100418 - 2100396 - g 70 -12.7 -2.87051 | gap 1, opp_overlap 2100416, overlap 2100395 TCCCCATCAGCAAAG CGTGCCCCGG CCCC CCGGGGC-CG TGACGGTACGTGACG TERM 1021 2100933 - 2100953 + G 71 -5.3 -4.37092 | CTGTCTGGCCCTCGT GCAGGCG CTGTGCC CGCCAGC TTTTGTCACCGGACT PPA1940 2099944 - 2101230 + | menaquinone-specific isochorismate synthase PPA1941 2103032 - 2101296 - | ABC transporter permease PPA1942 2103673 - 2103029 - | ABC transporter ATP-binding protein TERM 1022 2103950 - 2103934 - H 73 -2.9 -4.77165 | overlap 2103935 2103946 CCCCTTACAATAAAA CCGTGTT GAC AACCCGA GCCACCCTGGACAAG ubiE 2103936 - 2104694 + | ubiquinone/menaquinone biosynthesis methyltransferase PPA1944 2104691 - 2106514 + | hypothetical protein PPA1945 2107348 - 2106470 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase PPA1946 2107548 - 2108834 + | membrane protein, putative permease TERM 1023 2109426 - 2109402 - g 71 -7.9 -4.07568 | gap 1, overlap 2109404 GGTGCTGGCCGAAAA GATCCTCGGC GCAGCA GCCGAGGA-C AAGCGCGATCTCGAC TERM 1024 2109425 - 2109404 - g 77 -11.6 -3.63744 | overlap 2109402 TGCTGGCCGAAAAGA TCCTCGGC GCAGCA GCCGAGGA CAAGCGCGATCTCGA PPA1947 2108896 - 2109924 + | hypothetical protein PPA1948 2109924 - 2110568 + | hypothetical protein PPA1949 2110561 - 2110986 + | PTS protein, putative dihydroxyacetone kinase phosphotransfer protein TERM 1025 2111027 - 2110997 - T 86 -16.1 -2.83112 | opp_overlap 2110997, overlap 2110988 ATTGAACCTACTAGA CGGTGGTGCCCGG TTAGC CCAGGCGCCACCG TTTCACATTCTTAGA TERM 1026 2110997 - 2111027 + T 100 -16.1 -3.72051 | opp_overlap 2110997 2110988 ATTGAACCTACTAGA CGGTGGTGCCCGG TTAGC CCAGGCGCCACCG TTTCACATTCTTAGA PPA1950 2111528 - 2111070 - | deoxycytidylate deaminase PPA1951 2112549 - 2111614 - | Co/Zn/Cd cation transporter TERM 1027 2111856 - 2111869 + g 71 -9.5 -3.83318 | opp_overlap 2111856 2111855 GGGCGGCAAGGAAAT CGCGG ATAG CCGCG TTGTCTTCTTCGGGC PPA1952 2112772 - 2113737 + | L-lactate dehydrogenase TERM 1028 2114062 - 2114078 + G 70 -4.3 -4.48221 | overlap 2114063 ATCAGTCCGACATGT TCACGCC GCG GGCATGG TTTTCTCGGTTGCTC PPA1953 2113770 - 2115272 + | patatin-like phospholipase TERM 1029 2115295 - 2115337 + T 83 -11.8 -3.80551 | opp_overlap 2115300, overlap 2115296 AGGAACGTCCGGATA CGACACGACGGCGGCGAACG TCA CGTTCACCGCCGTCGCAGCA TTTCGTCGATGTTTC TERM 1030 2115296 - 2115336 + T 84 -15.3 -2.87608 | opp_overlap 2115300, overlap 2115295 GGAACGTCCGGATAC GACACGACGGCGGCGAACG TCA CGTTCACCGCCGTCGCAGC ATTTCGTCGATGTTT TERM 1031 2115332 - 2115300 - T 100 -25.7 -2.85351 | opp_overlap 2115296 2115295 CGTCCGGATACGACA CGACGGCGGCGAACG TCA CGTTCACCGCCGTCG CAGCATTTCGTCGAT PPA1954 2116169 - 2115351 - | sugar phosphatase/hydrolase PPA1955 2118102 - 2116246 - | hypothetical protein PPA1957 2119399 - 2118266 - | ROK family transcriptional regulator PPA1958 2119541 - 2121193 + | hypothetical protein PPA1959 2121190 - 2122125 + | binding-protein-dependent transport permease PPA1960 2122118 - 2123044 + | binding-protein-dependent transport permease TERM 1032 2123277 - 2123264 - g 89 -4.5 -5.29445 | GTGGAATAAGAAAAA CCCGA ACAC TCAGG TCACGTGGATCGCCA PPA1961 2123055 - 2124377 + | sugar-binding periplasmic protein TERM 1033 2124446 - 2124417 - f 93 -17.3 -3.17392 | opp_overlap 2124413 CAGTCGGGAACCGAA TCACCAGTGCGGA TGAA TCCACACTGGTGA TAGGTACGTTACGCG PPA1962 2125018 - 2126265 + | putative cell wall-associated hydrolase TERM 1034 2126308 - 2126270 - T 70 -11.8 -2.78712 | gap 2, overlap 2126267 TCCTCAACTGAACCA GCGTGACGCCGGCAATCC CTATC GG-TTGCCGGCGTCT-GC GGTGCCACCAAGGTA TERM 1035 2126528 - 2126563 + T 100 -26.4 -3.48276 | CGTCCGGGATACCCT CTAGGGTCCTGCATCG ACAT CGATGCAGGACCCTAG TTATGTCCGGCCAGG TERM 1036 2127009 - 2127044 + T 83 -14.8 -3.16055 | overlap 2127008 2127016 AAGTCCCATCGGGGT CGCTGAAGCGGTGATG AGTT CATCACCGCTTTCGTG TTCATGCGGCCTTTG TERM 1037 2127016 - 2127037 + T 100 -14.5 -3.95022 | overlap 2127008 2127009 ATCGGGGTCGCTGAA GCGGTGATG AGTT CATCACCGC TTTCGTGTTCATGCG PPA1964 2128112 - 2127186 - | binding-protein-dependent transport permease PPA1965 2129008 - 2128112 - | binding-protein-dependent transport permease TERM 1038 2128603 - 2128588 - G 89 -4.6 -5.16841 | opp_overlap 2128590, overlap 2128590 CCATATGAACAAAAA GCTGGT TGAG ACCGGC GGCCTGACCATCCTT PPA1966 2130444 - 2129137 - | extracellular solute-binding protein PPA1967 2131548 - 2130592 - | putative lysophospholipase PPA1968 2131818 - 2131564 - | hypothetical protein PPA1969 2132970 - 2131903 - | phosphoribosylaminoimidazole synthetase TERM 1039 2132850 - 2132836 - G 70 -3.4 -4.59853 | overlap 2132837 2132845 CGAAGCGTCGAAAAA GCCAGC GAA GCCGCC CAAGCCGCCAAGGAC PPA1970 2134454 - 2132967 - | amidophosphoribosyltransferase PPA1971 2135793 - 2134549 - | hypothetical protein TERM 1040 2135893 - 2135879 - R 75 -8.5 -4.04206 | TGATCGTCACACAAA CGGGG CAACT CCCCG CTGAACGTCCCAGGC TERM 1041 2135908 - 2135937 + r 89 -15.7 -3.40403 | gap 1 GCTGAACGTCCCAGG CCCTGCCTGCCGGC ACA GCCGAC-GGCAGGG TTATCCTACGCGGGA PPA1972 2137321 - 2135978 - | hypothetical protein PPA1973 2138230 - 2137463 - | stomatin/prohibitin-like protein PPA1974 2139024 - 2138227 - | hypothetical protein PPA1975 2141267 - 2139021 - | nitric-oxide reductase subunit B TERM 1042 2139903 - 2139884 - G 71 -7.8 -4.08216 | TGACGGTGGTGAAAA GCTCGAGG AAAT CCTCGACC CAGAGATGGACCACC PPA1976 2141513 - 2143600 + | para-aminobenzoate synthase PPA1977 2145839 - 2143587 - | phosphoribosylformylglycinamidine synthase II PPA1978 2146030 - 2147277 + | major facilitator superfamily permease PPA1979 2149821 - 2147287 - | aminopeptidase N PPA1980 2150405 - 2149968 - | hypothetical protein PPA1981 2150707 - 2152113 + | pyridine nucleotide-disulphide oxidoreductase TERM 1043 2152174 - 2152121 - T 100 -27.7 -2.60079 | opp_overlap 2152120 2152122 2152126, overlap 2152117 2152126 TCACCTGAGAAGTGA TCGAAGTCCAGTCATTGTGACCGAG TAGT CACGGCCACAATGACTGGACTTCGT TCGGTTTGACCTCAG TERM 1044 2152122 - 2152173 + T 100 -29 -3.28497 | opp_overlap 2152121 2152117 2152126, overlap 2152120 2152126 CACCTGAGAAGTGAT CGAAGTCCAGTCATTGTGACCGAG TAGT CACGGCCACAATGACTGGACTTCG TTCGGTTTGACCTCA TERM 1045 2152126 - 2152169 + T 100 -22.6 -3.43217 | opp_overlap 2152121 2152117 2152126, overlap 2152122 2152120 TGAGAAGTGATCGAA GTCCAGTCATTGTGACCGAG TAGT CACGGCCACAATGACTGGAC TTCGTTCGGTTTGAC TERM 1046 2152169 - 2152126 - T 100 -24.8 -3.10905 | opp_overlap 2152126 2152122 2152120, overlap 2152121 2152117 TGAGAAGTGATCGAA GTCCAGTCATTGTGACCGAG TAGT CACGGCCACAATGACTGGAC TTCGTTCGGTTTGAC PPA1982 2153661 - 2152186 - | acid phosphatase TERM 1047 2155424 - 2155444 + G 74 -3.2 -4.77567 | gap 1 CAACGACCTAGACTT CACCAC-CG TCGT CGAGAGGTG TTTTCTTGTCAAGAT TERM 1048 2155547 - 2155531 - g 74 -6.5 -4.32034 | overlap 2155534 CCACGATGACGAAAA CGACGAC ACT GTTGTCG CATATTCAGCAGCGG TERM 1049 2156398 - 2156374 - g 78 -9.9 -3.97209 | CCAACCAAGACCAAA CCGACACCGAC CAC GACGGCATCGG AGACGCCTGCGACCC PPA1983 2154378 - 2156441 + | hypothetical protein PPA1984 2156438 - 2156995 + | protein associated to putative adhesion protein PPA1985 2156999 - 2157235 + | hypothetical protein PPA1986 2157242 - 2158321 + | BadF/BadG/BcrA/BcrD ATPase family protein TERM 1050 2158381 - 2158339 - T 87 -14.1 -3.37474 | gap 1, overlap 2158340 CACAACACTGCAGAA TCCTGACGGCGGGGTGGACC ATGA GGACCACCCCGCCGT-ACGT CTCCAGGACGAACAC TERM 1051 2158380 - 2158340 - T 87 -17.6 -2.62003 | gap 1, overlap 2158339 ACAACACTGCAGAAT CCTGACGGCGGGGTGGACC ATGA GGACCACCCCGCCGT-ACG TCTCCAGGACGAACA PPA1987 2159073 - 2158399 - | phosphoribosylformylglycinamidine synthase subunit I PPA1988 2160341 - 2159076 - | phosphoribosylaminoimidazole-succinocarboxamide synthase PPA1989 2160476 - 2161039 + | alkyl hydroperoxide reductase C22 protein PPA1990 2160996 - 2162702 + | alkyl hydroperoxide reductase subunit F PPA1991 2162709 - 2163653 + | oxidative stress transcriptional regulatory protein PPA1992 2165120 - 2163687 - | adenylosuccinate lyase TERM 1052 2164761 - 2164705 - G 76 -14.6 -2.60079 | gap 2, opp_overlap 2164723, overlap 2164701 TGATCGGAGAACTGA GCGGCCAG-GCGCGACA-GCTGGTTG AGCGTGG CAACCATTTTGTCGCGCACTAGCCGC AGCGACTCCAGCACC TERM 1053 2165006 - 2164983 - G 71 -8.8 -3.72695 | opp_overlap 2164983 ATCGTCGCCACCAAA GCTCACACCG AGAT CGGCTTGAGC TTCCATGACGGTCAG TERM 1054 2165028 - 2165044 + g 83 -4.3 -5.07652 | overlap 2165023 GACGGTCAGCCAGAG TCTGCGC TCG GCACGGA TTTTGTTTTCCGGCG PPA1993 2166436 - 2165117 - | phosphoribosylamine-glycine ligase TERM 1055 2165401 - 2165419 + g 74 -11.6 -3.53012 | opp_overlap 2165383 CCTCGTCGTCAACCG GGGCGACG ACC CGGCGCCC TTTCGCCGGGCAAGC PPA1994 2167781 - 2166495 - | adenylosuccinate synthetase TERM 1056 2167268 - 2167278 + g 74 -6.8 -4.29302 | overlap 2167260 2167258 GGTTGTAGATCTTCA CCAG GAT CTGG TTCTTTTGGTCTAGA PPA1995 2168926 - 2167949 - | hypothetical protein TERM 1057 2168244 - 2168230 - G 74 -3.4 -4.82901 | overlap 2168234 TCTCGTCCACAAAAA CGAAGG CCA CCGCCG CGGGTTGACCATCAA PPA1996 2168978 - 2169712 + | GntR family transcriptional regulator PPA1997 2170526 - 2169837 - | N-acetylmannosamine-6-phosphate 2-epimerase PPA1998 2171479 - 2170559 - | dihydrodipicolinate synthase PPA1999 2172429 - 2171527 - | hypothetical protein PPA2000 2174058 - 2172454 - | putative sialic acid transporter TERM 1058 2173393 - 2173418 + g 78 -6.7 -4.58395 | overlap 2173394 AGTCTCGCCGACAGC GGCGCGAGCGG CCTC CTCCTCGCGCA TTTTTACAAAGTCGG PPA2002 2174713 - 2174186 - | hypothetical protein TERM 1059 2176788 - 2176772 - g 75 -2.9 -4.93877 | overlap 2176776 CCCCACCAAAGAAAA GCACCTC ACC AACGTGC GCTCTTCCACCGGCG PPA2003 2175111 - 2176973 + | GTPase PPA2004 2177147 - 2177683 + | hypothetical protein TERM 1060 2177824 - 2177784 - T 71 -11.7 -2.87931 | opp_overlap 2177785 2177787 CGTAGCCCCTAGACA TGGCACCGGCGCCCCACCA CCA CGGTGAGACGCCGGTGTGT TTCTTGGTTCGAGGA TERM 1061 2177785 - 2177823 + T 93 -12.3 -4.3255 | opp_overlap 2177784, overlap 2177787 GTAGCCCCTAGACAT GGCACCGGCGCCCCACC ACCAC GGTGAGACGCCGGTGTG TTTCTTGGTTCGAGG TERM 1062 2177787 - 2177821 + T 100 -17.1 -3.7642 | opp_overlap 2177784, overlap 2177785 AGCCCCTAGACATGG CACCGGCGCCCCACC ACCAC GGTGAGACGCCGGTG TGTTTCTTGGTTCGA PPA2005 2178202 - 2177840 - | biotin carboxyl carrier protein of methylmalonyl-CoA carboxyl-transferase (transcarboxylase, 1.3S subunit) PPA2006 2178460 - 2178218 - | C-terminal fragment of methylmalonyl-CoA carboxyltransferase PPA2007 2180061 - 2178487 - | methylmalonyl-CoA carboxyltransferase TERM 1063 2178739 - 2178717 - G 75 -7.6 -4.18018 | overlap 2178720 TCTGGCGACGGAAAA TGACGTTGGC AGC GCCATCGGCA CCCATCACCGCAATC PPA2008 2181570 - 2180077 - | oxaloacetate decarboxylase PPA2009 2183249 - 2181891 - | putative aerotaxis sensor receptor TERM 1064 2182655 - 2182626 - G 90 -17.9 -3.14564 | opp_overlap 2182615 CCAGGTCTCGACCAA CTGTCGAGCCCGG TTGA CCTGGCTCGACAG CTGTCCCAAAGTCGT PPA2010 2183676 - 2184002 + | hypothetical protein TERM 1065 2184045 - 2184012 - T 100 -11.8 -4.63527 | opp_overlap 2184012 CGATGACGTGAAAAA TCCCAGCCAATCCT CACAAC AGAACTGGCCGGGA TTCTTCACAAAACAA PPA2011 2185087 - 2184062 - | fructose-bisphosphate aldolase PPA2012 2185788 - 2185198 - | hypothetical protein PPA2013 2186412 - 2185822 - | rRNA methylase (SpoU family protein) TERM 1066 2186232 - 2186207 - G 71 -5.3 -4.34402 | overlap 2186209 GCCGCGACATTAAAA GCGTTGGCGGT ACGC ACCACCGACCC GATATTGAAATCGTG TERM 1067 2187266 - 2187228 - g 72 -11.6 -3.36878 | GTCAGCCAGCCACAA TCAGCTCGGCGGTCCCGC GTC GAGTGAAGGCCGAGCTGA ACGTGCCGTAGGTGA PPA2014 2186460 - 2187254 + | DedA family membrane protein PPA2015 2187837 - 2187292 - | hypothetical protein PPA2016 2188743 - 2187940 - | hypothetical protein PPA2017 2189783 - 2188740 - | periplasmic binding protein of proline/glycine betaine transport system PPA2018 2189897 - 2190274 + | putative preprotein translocase subunit PPA2020 2191971 - 2190460 - | transporter permease TERM 1068 2192089 - 2192041 - R 85 -11 -3.99957 | gap 1, overlap 2192033 2192048 CCAAATAGTGAGAAA CATCACAGCAGGGGCGTTGGTTC AACT GACCCAACGCCCCTAC-GAACTG TCACAACGCCGTCAC TERM 1069 2192083 - 2192048 - R 100 -19.8 -2.99719 | overlap 2192041 GTGAGAAACATCACA GCAGGGGCGTTGGTTC AACT GACCCAACGCCCCTAC GAACTGTCACAACGC PPA2021 2194695 - 2192122 - | ATP-dependent protease (Clp chaperone) PPA2022 2194985 - 2196343 + | branched-chain amino acid transport permease PPA2023 2197024 - 2196350 - | hypothetical protein TERM 1070 2197138 - 2197165 + r 77 -14 -2.87564 | opp_overlap 2197138 GCTCACGCACGACAA CGGGCCCGCACG TTTC CCAGCGGGCCCG TCTGTCGAAGGGTCA TERM 1071 2197165 - 2197138 - R 83 -14 -3.4252 | opp_overlap 2197138 GCTCACGCACGACAA CGGGCCCGCACG TTTC CCAGCGGGCCCG TCTGTCGAAGGGTCA PPA2024 2198086 - 2197178 - | fructose-1,6-bisphosphate aldolase TERM 1072 2198007 - 2197957 - G 78 -10.3 -3.86015 | GATCGTCTCCATAAA CCTCAGGTTCTACCCCATATGCC TTGAG GGCCTTCGGGGTAGAACCGCCGG ACTGGTCCAAGGCCG TERM 1073 2198145 - 2198135 - R 71 -6.8 -4.15453 | CAACGTACCCGAAAA CGTG GGT CACG AAAGGTTTAGCGAGG PPA2025 2198820 - 2198152 - | hypothetical protein PPA2026 2199929 - 2198718 - | manganese transport protein TERM 1074 2200646 - 2200617 - g 73 -10.1 -3.61654 | gap 1, overlap 2200620 GAGACCGACGTCAAA CCATGGCAGCGTTG CGC CAACG-TGCCATCG ACCTGGAGCGCGAGC PPA2027 2200064 - 2201341 + | putative two component sensor kinase PPA2028 2201372 - 2202046 + | putative two-component response regulator PPA2030 2202191 - 2202925 + | ABC transporter ATP-binding protein TERM 1075 2205156 - 2205190 + G 76 -6.2 -4.67353 | CCTGGGCATTGCCCT GGGGATCGGGTACGGC ATC GCCGGATCCCACGCCC TTTTTGGCTCCCTCA PPA2031 2202922 - 2205345 + | ABC transporter associated permease TERM 1076 2205437 - 2205390 - T 100 -19.8 -3.26471 | overlap 2205406 TGAGGTTTACAGCAA GCCCTGCTGCTGTAAAGCCGGG ATAA CCCGGTCACACAGCAGCGGGGC CTGACGCACGTCGTC PPA2032 2205854 - 2205381 - | MutT/NUDIX family protein TERM 1077 2207053 - 2207029 - g 76 -12.9 -3.27298 | opp_overlap 2207028 2207026 2207025 2207023 CGCCGCAATCATCAA CTGGGCGACGA TCA TCATCACCCAG ATGCTCTTTCGTCGC PPA2033 2205917 - 2207275 + | aromatic amino acid transport permease AroP PPA2034 2208895 - 2207318 - | membrane protein (putative permease) PPA2035 2210139 - 2209096 - | putative zinc-binding dehydrogenase PPA2036 2211100 - 2210243 - | lipase/acylhydrolase PPA2037 2211716 - 2211255 - | putative heat shock transcriptional regulator PPA2038 2212860 - 2211718 - | chaperone protein DnaJ PPA2039 2213599 - 2212934 - | molecular chaperone GrpE (heat shock protein) TERM 1078 2213657 - 2213687 + r 100 -8.9 -4.93296 | overlap 2213659 2213661 TGGCGACCCGGCGGC GGGGCTGGGGTCA GGCCG TGGCCCCGGTCAC TTTTTCTCGTCCTCG dnaK 2215537 - 2213684 - | molecular chaperone DnaK TERM 1079 2214505 - 2214533 + g 72 -10.9 -3.32268 | opp_overlap 2214514 GCAGGGAGGCGCCGA GGGCCACAACCTC ATC GGGGTTGACGCCC TTGTGCGGATCCTTA TERM 1080 2215780 - 2215757 - R 100 -18.2 -4.77036 | TCCGACCATGAAAAA TGCCGGACGG CGAA CCGTCCGGCA GCTTCCGCACTTCAC PPA2041 2216030 - 2215797 - | hypothetical protein PPA2042 2217172 - 2216027 - | putative low-affinity phosphate transport protein PPA2043 2217596 - 2218327 + | putative two-component system response regulator PPA2044 2219043 - 2218834 - | hypothetical protein PPA2045 2219066 - 2219740 + | deoxyribose-phosphate aldolase PPA2046 2220492 - 2219764 - | hypothetical protein PPA2047 2221814 - 2220639 - | hypothetical protein TERM 1081 2220948 - 2220914 - G 82 -11.4 -3.9461 | overlap 2220916 2220919 CCCGCCCAATAAGAA CAGGACCGTAGAGGTG GGT CACCTCTCCGGTGCTC GAGACGAGGGTGGCA TERM 1082 2220946 - 2220916 - G 88 -14 -3.56318 | overlap 2220914 2220919 CGCCCAATAAGAACA GGACCGTAGAGGTG GGT CACCTCTCCGGTGC TCGAGACGAGGGTGG TERM 1083 2220943 - 2220919 - G 79 -14.3 -2.9043 | overlap 2220916 2220914 CCAATAAGAACAGGA CCGTAGAGGTG GGT CACCTCTCCGG TGCTCGAGACGAGGG PPA2048 2224638 - 2221987 - | pyruvate phosphate dikinase TERM 1084 2224129 - 2224146 + g 84 -9.1 -4.52143 | ATCGGCACTCAGATC GGTGTCG GACT CGACGCC TTTCTTCTCTTTAAG PPA2049 2225861 - 2224977 - | hypothetical protein PPA2050 2226037 - 2227041 + | hypothetical protein PPA2051 2227121 - 2227978 + | putative phosphoserine phosphatase PPA2052 2227981 - 2228790 + | hypothetical protein TERM 1085 2229060 - 2229042 - f 73 -11.6 -3.35679 | TGCCGTCACCGACAA CCAGCCGC ACG GCGGCAGG AGGACAGATGTCAGA PPA2053 2229068 - 2230582 + | coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) TERM 1086 2230607 - 2230643 + T 81 -12.9 -3.48593 | opp_overlap 2230610, overlap 2230610 TACAACCCTGACCCA CAATCGCCCCAGGACCG TTT CGGTTCCGGGGCGATCA TTATGTGCGGCAGTC TERM 1087 2230610 - 2230640 + T 100 -19 -2.88822 | opp_overlap 2230610, overlap 2230607 AACCCTGACCCACAA TCGCCCCAGGACCG TTT CGGTTCCGGGGCGA TCATTATGTGCGGCA TERM 1088 2230640 - 2230610 - T 100 -19 -3.36175 | opp_overlap 2230610 2230607 AACCCTGACCCACAA TCGCCCCAGGACCG TTT CGGTTCCGGGGCGA TCATTATGTGCGGCA TERM 1089 2230682 - 2230666 - T 71 -10.9 -3.30124 | opp_overlap 2230660 CGGCAGTCGCGACAA GTGACGA TTT TCGTCAC GTCACGTCATTGTGC PPA2054 2232197 - 2230797 - | amidase PPA2055 2233223 - 2232222 - | LacI family transcription regulator PPA2056 2234598 - 2233261 - | beta-glucanase TERM 1090 2233901 - 2233920 + g 74 -3.4 -4.86731 | opp_overlap 2233886, overlap 2233903 TGCCGCGACATCCGC CACAGCGA AGGG TCGCCGGG TTTTGTTTCCCAGGC TERM 1091 2234344 - 2234312 - G 74 -3.3 -4.73388 | overlap 2234315 AACGTGTAGGAAAAA CTATCGACCTGCTCG GCA CGAGCAGCCAAATGG AGTTGCCCGCCTGAG PPA2057 2235065 - 2236876 + | alpha-galactosidase TERM 1092 2237965 - 2237943 - g 70 -4.9 -4.4715 | overlap 2237962 CGTCAAGGTACAAAA CACCGTT TCCATCATT AACGGTG TTAAAACGCCCGATT PPA2058 2236873 - 2238183 + | putative secreted sugar-binding protein PPA2059 2238189 - 2239091 + | binding-protein-dependent transport system permease PPA2060 2239088 - 2239903 + | binding-protein-dependent transport system permease PPA2061 2241476 - 2239956 - | hypothetical protein PPA2062 2242669 - 2241476 - | ROK family transcriptional regulator PPA2063 2242860 - 2244656 + | putative peptide-binding transport protein TERM 1093 2244786 - 2244796 + G 79 -8.2 -4.57569 | opp_overlap 2244773 2244785 GATGACGCGATACAT CGCG CAA CGCG TTTTTCAAGCGCTGA PPA2064 2244772 - 2245731 + | dipeptide transport system permease protein DppB PPA2065 2245728 - 2246669 + | dipeptide transport system permease protein DppC TERM 1094 2248122 - 2248112 - g 78 -2.4 -5.1101 | TTAGCATCCAAAAAA TCGG AGA CCGG CGTTCGCGTGCCGAC PPA2066 2246671 - 2248725 + | ATP-binding protein of dipeptide ABC transporter PPA2359 2248722 - 2249660 + | putative transcriptional repressor protein PPA2070 2249642 - 2250952 + | alpha-L-fucosidase precursor PPA2071 2251258 - 2251869 + | hypothetical protein PPA2072 2252196 - 2251942 - | hypothetical protein PPA2073 2252696 - 2252307 - | hypothetical protein PPA2075 2252920 - 2252693 - | hypothetical protein PPA2076 2254330 - 2253365 - | inosine-uridine preferring nucleoside hydrolase PPA2077 2255035 - 2254400 - | TetR family transcriptional regulator PPA2078 2255700 - 2255035 - | ABC transporter, ATP-binding protein PPA2081 2256745 - 2255891 - | ABC transporter, putative permease PPA2082 2258607 - 2256742 - | ABC transporter ATP-binding protein PPA2083 2259197 - 2258604 - | putative permease TERM 1095 2259102 - 2259090 - G 70 -10.5 -3.42147 | GCCAACGAACATGAA CGCCG GCC CGGCG AAACCAATCATCCCG PPA2084 2260726 - 2259194 - | ABC transporter ATP-binding protein (putative cobalt transport system) PPA2085 2261541 - 2260723 - | ABC transporter associated permease (putative cobalt transport system) PPA2086 2261655 - 2262113 + | hypothetical protein TERM 1096 2262471 - 2262496 + G 76 -13.3 -3.05844 | AGCTCCCTCGTCCTG GCGATGGCGTC CATC GGTGCCATCGC TGTTGGGCTGACCGG TERM 1097 2262620 - 2262610 - g 89 -6.8 -5.1287 | overlap 2262615 GGCACAGCGAAAAAA CAGC ATG GCTG GCCCAACCACCGAGG PPA2087 2262351 - 2262665 + | hypothetical protein PPA2088 2262771 - 2263454 + | hypothetical protein PPA2089 2264243 - 2263539 - | hypothetical protein PPA2090 2265607 - 2264240 - | ABC transporter permease TERM 1098 2265580 - 2265570 - G 71 -8.2 -4.08767 | GCCATGCGGTGAAAA CCGC GCA GCGG ACGTATACCCTGAAG PPA2091 2266341 - 2265607 - | ABC transporter ATP-binding protein TERM 1099 2266166 - 2266127 - G 85 -16.6 -2.97439 | overlap 2266124 AATCCGACCAAACCA CGGATGGTGTCGACGTCA TCGC TGACATCGACACCATTCA CCCGAAAGTGGCCGG PPA2092 2267932 - 2266523 - | dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex PPA2093 2268954 - 2267950 - | pyruvate dehydrogenase E1 component, beta subunit PPA2094 2270099 - 2268954 - | pyruvate dehydrogenase E1 component, alpha subunit PPA2095 2270288 - 2271658 + | protoporphyrinogen oxidase PPA2096 2271658 - 2272938 + | molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase TERM 1100 2272975 - 2272941 - f 75 -10.7 -3.63627 | gap 1, opp_overlap 2272942 2272948, overlap 2272942 TCCGCAGATCTGAAA TCTGGACGCCGTGACG GATT CGTCACGGCGT-CTGC CGTATTCCGGGCATG TERM 1101 2272974 - 2272942 - f 80 -14.2 -2.77962 | gap 1, opp_overlap 2272942 2272948, overlap 2272941 CCGCAGATCTGAAAT CTGGACGCCGTGACG GATT CGTCACGGCGT-CTG CCGTATTCCGGGCAT PPA2097 2273208 - 2275319 + | 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase TERM 1102 2275380 - 2275352 - T 83 -8 -4.70659 | opp_overlap 2275352, overlap 2275354 CCTCATACTGAAAAA CTCTGGCCTGAG GGGGT CCCGGGCCAGGG TTCTTGTGTGTCTGA TERM 1103 2275352 - 2275380 + T 85 -11 -3.95183 | gap 1, opp_overlap 2275352 2275354 CCTCATACTGAAAAA CTCTGGCCTGAGG GGGT CC-CGGGCCAGGG TTCTTGTGTGTCTGA PPA2098 2275778 - 2275533 - | ABC transporter ATP-binding protein PPA2099 2276300 - 2276025 - | ABC transporter transmembrane region PPA2101 2276873 - 2276577 - | hypothetical protein PPA2102 2277365 - 2276901 - | hypothetical protein PPA2103 2277586 - 2277984 + | hypothetical protein PPA2104 2278033 - 2278341 + | putative transposase PPA2105 2279537 - 2278518 - | triacylglycerol lipase precursor PPA2106 2280127 - 2281629 + | endoglycoceramidase TERM 1104 2281679 - 2281711 + T 100 -16.9 -4.4261 | opp_overlap 2281673, overlap 2281680 TCCCAGACACTTTTA CGACCGGCCCTCCTC CTT GGGGTGGGCCGGTCC TTTTCGTGTTGCGGG TERM 1105 2281680 - 2281710 + T 100 -20.4 -3.25084 | opp_overlap 2281673, overlap 2281679 CCCAGACACTTTTAC GACCGGCCCTCCTC CTT GGGGTGGGCCGGTC CTTTTCGTGTTGCGG PPA2107 2282435 - 2281998 - | hypothetical protein PPA2108 2282705 - 2283520 + | cAMP factor TERM 1106 2283735 - 2283694 - T 100 -30.5 -2.85351 | overlap 2283719 TTGTGGCACACGAGA GTTCACAGCCGTGACCGTT CAGG AACGGTCACGGCTGTGAAC GCGTCCAGTCGGTGC PPA2109 2284472 - 2283696 - | hypothetical protein PPA2110 2284487 - 2284963 + | low molecular weight protein-tyrosine-phosphatase PPA2111 2285027 - 2286121 + | hypothetical protein PPA2112 2286118 - 2286816 + | putative two-component response regulator PPA2113 2286813 - 2288243 + | putative two-component system sensor kinase PPA2114 2288345 - 2289310 + | putative asparaginase PPA2115 2289916 - 2289317 - | isopentenyl-diphosphate delta-isomerase TERM 1107 2290407 - 2290431 + G 86 -14.3 -3.35798 | GCCTTGGTAGTGGCG GTGGGGGCAAC GGC GTTGGCCCCAC TTCTGCCTCCCCAAT PPA2116 2290050 - 2291243 + | trypsin-like serine protease PPA2117 2291412 - 2291735 + | hypothetical protein PPA2118 2291788 - 2292888 + | NADH:flavin oxidoreductase PPA2119 2292943 - 2293188 + | hypothetical protein TERM 1108 2293689 - 2293711 + G 70 -4.1 -4.71426 | gap 1 CATCCCATTCTTCAT CGGTG-GCGT CGCA GCGCTCATCG TTTTCTTCATGCAGA PPA2120 2293195 - 2294427 + | dicarboxylate transport protein / putative alpha-ketoglutarate permease PPA2121 2294877 - 2297447 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1109 2298184 - 2298156 - g 79 -9.5 -4.25104 | GGTGCTGGAGGAAAA CCCCGAAATCGCC ACC GACGAGTTCGCGG CCGAGATCCACGATA nrdF 2297482 - 2298468 + | ribonucleotide-diphosphate reductase subunit beta TERM 1110 2298541 - 2298585 + F 81 -12.9 -3.61517 | gap 1, opp_overlap 2298535, overlap 2298542 2298545 GCCACAGCATGCACG CTGACG-TGTCGGCCCCAAG TATGGT CTTGGGGCCGGCATCGTCCC TTGTTAGAGCCCACT TERM 1111 2298542 - 2298584 + F 86 -16.4 -2.76696 | gap 1, opp_overlap 2298535, overlap 2298541 2298545 CCACAGCATGCACGC TGACG-TGTCGGCCCCAAG TATGGT CTTGGGGCCGGCATCGTCC CTTGTTAGAGCCCAC TERM 1112 2298545 - 2298581 + F 85 -16.7 -2.6563 | gap 1, opp_overlap 2298535, overlap 2298542 2298541 CAGCATGCACGCTGA CG-TGTCGGCCCCAAG TATGGT CTTGGGGCCGGCATCG TCCCTTGTTAGAGCC PPA2123 2298866 - 2299078 + | hypothetical protein PPA2125 2299238 - 2300320 + | polyphosphate glucokinase/transcriptional regulator PPA2126 2300494 - 2301105 + | hypothetical protein PPA2366 2301738 - 2301971 + | hypothetical protein TERM 1113 2303403 - 2303346 - g 71 -5.6 -4.43012 | overlap 2303350 ACTCCAACACCAAAA CCAACCCCAACA-CCGAAGCCAAAGCCA ACCC CGGCTCCGGCTCCGACTAGTGGGGC-GA CCTCTGATGAGTCGA TERM 1114 2303400 - 2303350 - g 80 -11.9 -3.75465 | gap 1, overlap 2303346 CAACACCAAAACCAA CCCCAACA-CCGAAGCCAAAGCCA ACCC CGGCTCCGGCTCCGACTAGTGGGG CGACCTCTGATGAGT PPA2127 2302311 - 2303528 + | putative adhesion or S-layer protein TERM 1115 2303613 - 2303573 - T 100 -22.8 -2.76263 | opp_overlap 2303573, overlap 2303576 TTTATCAGCCAATCA CAATGGCCATGGCTCACA GTTCT TGTGGGCCATGGCCATTG TTTTTCAGCCACGAA TERM 1116 2303573 - 2303613 + T 100 -25.7 -4.56597 | opp_overlap 2303573 2303576 TTTATCAGCCAATCA CAATGGCCATGGCTCACAG TTC TTGTGGGCCATGGCCATTG TTTTTCAGCCACGAA TERM 1117 2303610 - 2303576 - T 100 -18.7 -3.52919 | opp_overlap 2303573, overlap 2303573 ATCAGCCAATCACAA TGGCCATGGCTCACA GTTCT TGTGGGCCATGGCCA TTGTTTTTCAGCCAC PPA2128 2305441 - 2303771 - | arginyl-tRNA synthetase TERM 1118 2304611 - 2304601 - G 71 -6.8 -4.25104 | overlap 2304602 GCCCCTCGACGAAAA CGCA CAG TGCG CCGTTGTCCTCGACA PPA2129 2305576 - 2306397 + | 2,5-diketo-D-gluconic acid reductase A TERM 1119 2306465 - 2306412 - T 91 -13.1 -3.94877 | gap 1, opp_overlap 2306420 2306423, overlap 2306413 ATTCTGCAACAATAA CCGGTCATA-GCTTGGCCCCGGCAAC GCG GTTGCCGGGGCCAATCGTCTGTCCTT ACGAGTTGAGGGCTT TERM 1120 2306464 - 2306413 - T 88 -16.6 -2.96444 | gap 1, opp_overlap 2306420 2306423, overlap 2306412 TTCTGCAACAATAAC CGGTCATA-GCTTGGCCCCGGCAAC GCG GTTGCCGGGGCCAATCGTCTGTCCT TACGAGTTGAGGGCT TERM 1121 2306420 - 2306456 + T 100 -20.9 -3.00476 | opp_overlap 2306413 2306412, overlap 2306423 ACAATAACCGGTCAT AGCTTGGCCCCGGCAAC GCG GTTGCCGGGGCCAATCG TCTGTCCTTACGAGT TERM 1122 2306423 - 2306453 + T 100 -25.6 -2.73067 | opp_overlap 2306413 2306412, overlap 2306420 ATAACCGGTCATAGC TTGGCCCCGGCAAC GCG GTTGCCGGGGCCAA TCGTCTGTCCTTACG PPA2130 2307150 - 2306464 - | OmpA family membrane associated protein PPA2131 2309328 - 2307646 - | glucose-6-phosphate isomerase PPA2132 2309421 - 2310395 + | hypothetical protein PPA2133 2311085 - 2310420 - | putative aldolase PPA2134 2311254 - 2311784 + | starvation-inducible DNA-binding protein or fine tangled pili major subunit TERM 1123 2311865 - 2311808 - f 74 -13.5 -2.56095 | gap 1, opp_overlap 2311816 TTCAGACGCAACCCA TCGTTCAC-CATGCTGTGGGTCCCGAGA TTA TCTCGGGACCCACAGTGCGTATTCACGA CCGCCACACTCGTCG TERM 1124 2311816 - 2311856 + F 100 -22.7 -3.01712 | opp_overlap 2311808 CAACCCATCGTTCAC CATGCTGTGGGTCCCGAGA TTA TCTCGGGACCCACAGTGCG TATTCACGACCGCCA TERM 1125 2312106 - 2312070 - g 72 -13.8 -2.62396 | gap 1, overlap 2312072 CATGGCGCTAGACCA CATCGAGCGCGCCGTCG CCGC CGACGGCAT-CTCGATG TACGAGCACCAAGAA PPA2135 2311852 - 2314530 + | DeaD/DeaH box helicase PPA2136 2315060 - 2314545 - | anaerobic ribonucleoside-triphosphate reductase activating protein PPA2137 2317399 - 2315057 - | anaerobic ribonucleoside triphosphate reductase PPA2138 2317855 - 2318316 + | phosphatidylethanolamine-binding protein TERM 1126 2318336 - 2318365 + F 100 -21.5 -3.07113 | overlap 2318349 TCCTGTACCGATGAG GCAGGTGTCGCGG GTGT CCGCGGCACCTGC TTGACTGACATCGTG PPA2139 2318549 - 2319613 + | putative serine esterase cutinase PPA2140 2320317 - 2319619 - | hypothetical protein TERM 1127 2320324 - 2320340 + H 78 -6.5 -4.62336 | opp_overlap 2320325, overlap 2320325 AGACAGCACAGGGAA AGGCTAC TCG GTAGCCA TTTTTCGAATGGCAT TERM 1128 2320339 - 2320325 - H 75 -10 -3.73414 | opp_overlap 2320324 2320325 GACAGCACAGGGAAA GGCTAC TCG GTAGCC ATTTTTCGAATGGCA TERM 1129 2320554 - 2320578 + H 90 -10 -4.68705 | opp_overlap 2320554 2320553 ACAACGAATAAGAAG CCTCGGATCG AAGTC CGGTTCGAGG TTTTATTACGCTTGT PPA2141 2320819 - 2321400 + | hypothetical protein TERM 1130 2321495 - 2321468 - f 79 -12.6 -3.25823 | opp_overlap 2321470, overlap 2321469 GTTGCCCGACATGAA TGGGGCTGCGGG TTTT CCCGCAGCCCTT TGTCACGTCCCCGCT TERM 1131 2321494 - 2321469 - f 84 -16.1 -2.55351 | opp_overlap 2321470, overlap 2321468 TTGCCCGACATGAAT GGGGCTGCGGG TTTT CCCGCAGCCCT TTGTCACGTCCCCGC TERM 1132 2321470 - 2321493 + F 100 -19.6 -3.89346 | opp_overlap 2321469 2321468 TGCCCGACATGAATG GGGCTGCGGG TTTT CCCGCAGCCC TTTGTCACGTCCCCG PPA2142 2321679 - 2322800 + | putative lysophospholipase TERM 1133 2322821 - 2322864 + F 83 -13.9 -3.33492 | gap 1, overlap 2322821 ACTCAATGATGTCCT C-ATAGCGGCTGAGCCCAGG TATTC CCTGGGCTCAGCCGGTGCCG TTATACGATCACTAG TERM 1134 2322821 - 2322863 + F 78 -14.1 -2.59881 | overlap 2322821 ACTCAATGATGTCCT CATAGCGGCTGAGCCCAGG TATTC CCTGGGCTCAGCCGGTGCC GTTATACGATCACTA TERM 1135 2323142 - 2323130 - g 71 -9.1 -3.72576 | TGCTGGCGTATCAAA CGCCA CCT TGGCG AAGATTCCAGCCGCT TERM 1136 2323558 - 2323543 - g 70 -3.2 -4.58395 | overlap 2323544 2323545 TCGACGGCGGAAAAA TTGCCG CGGC CGTCAA GGCGAAATCGGCCCC PPA2143 2322990 - 2324483 + | hypothetical protein TERM 1137 2324928 - 2324907 - g 81 -7.9 -4.66953 | CCAAGACCGGAAAAA CCGTCGGCG GATA CGACAACGG CGGCGACAACATCGG PPA2144 2324480 - 2325340 + | hypothetical protein PPA2145 2325337 - 2326260 + | mebrane protein, permease PPA2146 2326588 - 2327973 + | hypothetical protein PPA2147 2329939 - 2328008 - | membrane protein, MviN-like protein PPA2148 2331116 - 2329842 - | aspartate kinase TERM 1138 2330632 - 2330614 - GH 78 -4.4 -4.8667 | overlap 2330615 2330618 TAGATCTCACAAAAA TCAGCGCC CAG GGAGCTGG CCAGGGCGACCGCAG PPA2149 2331304 - 2333847 + | penicillin-binding protein (transglycosylase/transpeptidase) PPA2150 2333735 - 2334763 + | calcineurin-like phosphoesterase PPA2151 2335002 - 2335670 + | putative intracellular protease / general stress protein 18 TERM 1139 2335692 - 2335719 + F 81 -12 -3.74077 | opp_overlap 2335680 2335692 CAACTTCAGAAGAAA GGGACTCGCATC TGCA GGTGTGGGTCCC TTTGCGTATGTCCAA TERM 1140 2337095 - 2337083 - g 71 -5.5 -4.31433 | GACGGGTACAAGAAA GACCA ATG TGGCC AGATGTGCAAGTACG PPA2152 2335970 - 2337637 + | putative peptide transport system secreted peptide-binding protein TERM 1141 2337657 - 2337693 + F 86 -15.9 -2.78384 | overlap 2337659 TCCGTGATGACGCAC CCGTCGGTCTGCCGA ATTAGTC TCGACGGACCGACGG TGTCGTGAGGAACAC PPA2153 2337710 - 2338633 + | putative peptide ABC transporter, permease component TERM 1142 2339043 - 2339085 + G 71 -5.5 -4.37886 | gap 2 CTGGTTGCGGGCTTC CG-CGGCGGCT-GGCTCGACA CCC TGCTGAGCCGAACCGGCGACG TTTTCTACGCCATCC PPA2154 2338626 - 2339597 + | putative peptide ABC transporter, permease component PPA2155 2339607 - 2340644 + | putative peptide ABC transporter, ATP-binding protein PPA2156 2340634 - 2341695 + | putative peptide ABC transporter, ATP-binding protein TERM 1143 2341755 - 2341727 - T 100 -18.2 -3.76568 | TCACTGAGAACACAA GCACCCGCCACA GTCCA CGTGGCGGGTGC TGCATCCAGGGACTG rpmE2 2342168 - 2341923 - | 50S ribosomal protein L31 type B TERM 1144 2342413 - 2342403 - g 71 -5.4 -4.36914 | TCGTTGGGTAGAAAA GTCA CCC TGAC TCTGACCCCCAAAGC PPA2158 2342265 - 2342501 + | 50S ribosomal protein L28 rpmG 2342501 - 2342671 + | 50S ribosomal protein L33 rpsN 2342671 - 2342976 + | 30S ribosomal protein S14 rpmF 2342981 - 2343151 + | 50S ribosomal protein L32 TERM 1145 2343161 - 2343190 + F 76 -13.6 -2.70932 | opp_overlap 2343153 GACTGAACCCTGGGA GCCTGGGCGGTC CAGCAT GACTGCTCAGGC TCATTACCAAAACGC PPA2163 2343229 - 2343594 + | FK506-binding protein/peptidyl-prolyl cis-trans isomerase PPA2164 2345577 - 2343607 - | putative beta-N-acetylglucosaminidase precursor PPA2165 2345736 - 2346149 + | urocanate hydratase fragment PPA2166 2346204 - 2347742 + | urocanate hydratase PPA2167 2347742 - 2348938 + | allantoate amidohydrolase PPA2168 2348935 - 2350275 + | N-formimino-L-glutamate deiminase PPA2169 2350272 - 2351462 + | imidazolonepropionase TERM 1146 2353093 - 2353060 - g 79 -13.1 -3.53012 | TCCTCGCCCCCGAAA TCGACGAAGCCCACC GCCT GGTGGCCTCCGGCGA GCTCCTCGAGGTCGC hutH 2351598 - 2353133 + | histidine ammonia-lyase PPA2171 2353310 - 2353648 + | hypothetical protein PPA2172 2354836 - 2354102 - | NAD-dependent deacetylase TERM 1147 2354219 - 2354209 - G 83 -4.6 -5.07486 | CACGGTTAATAAAAA CCAG GTG CCGG CCGCGGAAGAACCTC PPA2173 2355558 - 2354839 - | hypothetical protein PPA2174 2356879 - 2355632 - | proline iminopeptidase TERM 1148 2356229 - 2356240 + g 71 -7.2 -4.15044 | opp_overlap 2356213 GTCACCGCTCGGGGT GGCG ATCT CGCC TTTCTTCGCCAACGC PPA2175 2357193 - 2358224 + | rare lipoprotein A (RlpA) family protein TERM 1149 2358302 - 2358245 - T 100 -29.4 -2.80113 | gap 1, opp_overlap 2358251 2358253 TACCATCGCAGCAGA TTGTGAC-AGCGTCGGCCCCCCGATCC CTGGT GGATCGGGGGGCCGACGCTAGTTTCAA TACTTCTAAGGCATC TERM 1150 2358251 - 2358296 + T 100 -31.4 -3.72984 | gap 1, opp_overlap 2358245, overlap 2358253 CGCAGCAGATTGTGA C-AGCGTCGGCCCCCCGATCC CTGGT GGATCGGGGGGCCGACGCTAG TTTCAATACTTCTAA TERM 1151 2358253 - 2358293 + T 100 -34.2 -2.9583 | opp_overlap 2358245, overlap 2358251 CAGCAGATTGTGACA GCGTCGGCCCCCCGATCC CTGGT GGATCGGGGGGCCGACGC TAGTTTCAATACTTC PPA2176 2359131 - 2358316 - | hypothetical protein TERM 1152 2359161 - 2359178 + H 78 -11.3 -3.70139 | opp_overlap 2359164, overlap 2359159 CTAGGGGGTTGGAAC GTACGCG CATA CGCGTAC TCTTTATTCAGCTTG PPA2177 2359454 - 2359765 + | hypothetical protein TERM 1153 2360102 - 2360090 - g 76 -6.2 -4.63527 | opp_overlap 2360089 TCAGGACGCCAAAAA CCCC GAGGT GGGG CTAGTTGCCGGTTAT PPA2178 2359743 - 2360306 + | hypothetical protein PPA2179 2361851 - 2360337 - | potassium/proton antiporter PPA2180 2362639 - 2361995 - | hypothetical protein TERM 1154 2362675 - 2362642 - R 88 -15.3 -3.54475 | overlap 2362646 GGCGGCACCACATAA CGAAGTCCCGGGGAT GCAT ATCCCCGGGACCCAG CTGGCGGTGACGGAG TERM 1155 2362671 - 2362646 - R 100 -19.1 -3.51076 | overlap 2362642 GCACCACATAACGAA GTCCCGGGGAT GCAT ATCCCCGGGAC CCAGCTGGCGGTGAC PPA2181 2364251 - 2362884 - | RfbX family protein involved in the export of O-antigen and teichoic acid PPA2182 2364697 - 2364248 - | putative cytidine and deoxycytidylate deaminase PPA2183 2365465 - 2364734 - | hypothetical protein upp 2365576 - 2366217 + | uracil phosphoribosyltransferase PPA2185 2366214 - 2366957 + | hypothetical protein PPA2186 2367515 - 2366994 - | hypothetical protein TERM 1156 2369082 - 2369097 + G 84 -3.2 -5.2422 | GGCATGGCATTGGCC GATGTG GGCT CTCATC TTTTTTGGTGTCATT TERM 1157 2369464 - 2369445 - g 86 -15 -3.29829 | opp_overlap 2369438 GATAGTGGTGGAGAA CGTGCCGC ACGT GCGGCACG TCAACCGTATTGAGA PPA2187 2367841 - 2369796 + | K+ potassium transporter TERM 1158 2369819 - 2369855 + TF 90 -10.9 -4.39426 | opp_overlap 2369820 2369821, overlap 2369820 2369821 TCGCTGATACTCACA ACTGATTCCCGAGGC CTACTGA GCCTCGGGAATCACC TTTTCTCAGGGTCTA TERM 1159 2369820 - 2369854 + TF 86 -14.4 -3.23174 | opp_overlap 2369820 2369821, overlap 2369819 2369821 CGCTGATACTCACAA CTGATTCCCGAGGC CTACTGA GCCTCGGGAATCAC CTTTTCTCAGGGTCT TERM 1160 2369854 - 2369820 - Tf 87 -15.1 -3.39327 | opp_overlap 2369820 2369819 2369821, overlap 2369821 CGCTGATACTCACAA CTGATTCCCGAGGCC TACTG AGCCTCGGGAATCAC CTTTTCTCAGGGTCT TERM 1161 2369853 - 2369821 - Tf 95 -18.6 -2.63382 | opp_overlap 2369820 2369819 2369821, overlap 2369820 GCTGATACTCACAAC TGATTCCCGAGGCC TACTG AGCCTCGGGAATCA CCTTTTCTCAGGGTC TERM 1162 2369821 - 2369853 + TF 87 -17.9 -2.53422 | opp_overlap 2369821 2369820, overlap 2369820 2369819 GCTGATACTCACAAC TGATTCCCGAGGC CTACTGA GCCTCGGGAATCA CCTTTTCTCAGGGTC PPA2188 2370552 - 2369851 - | glutamine amidotransferase / GMP synthase PPA2189 2370538 - 2370864 + | hypothetical protein TERM 1163 2370940 - 2370912 - fH 78 -14.6 -2.62184 | opp_overlap 2370917, overlap 2370917 GCCTCCTCGAGACGA CGAAACCCCGCC ACAAA GGCGGGGTTTCC ATCTGCGCGCCCGGA TERM 1164 2370935 - 2370917 - fH 87 -13.1 -3.81951 | opp_overlap 2370917, overlap 2370912 CTCGAGACGACGAAA CCCCGCC ACAAA GGCGGGG TTTCCATCTGCGCGC TERM 1165 2370917 - 2370935 + FH 84 -13.1 -3.70902 | opp_overlap 2370917 2370912 CTCGAGACGACGAAA CCCCGCC ACAAA GGCGGGG TTTCCATCTGCGCGC TERM 1166 2371243 - 2371214 - fH 100 -14.9 -3.93695 | CCCACCATGCACAAA GCCCGGCGCCCCC TATA GGAGTCACCGGGC ATCCGCGGAGGTGGC TERM 1167 2373308 - 2373281 - g 72 -11.2 -3.2818 | overlap 2373279 CTAACACCCACAAGA CCGCCATGGCGC CGCC GAGCCACAGCGG GTTAAAGAAGTCCCC PPA2190 2371561 - 2373414 + | membrane-associated protein PPA2191 2374473 - 2373463 - | LacI family transcriptional regulator PPA2192 2375710 - 2374475 - | galactokinase PPA2193 2375688 - 2377637 + | sodium:solute symporter PPA2194 2377648 - 2377920 + | hypothetical protein TERM 1168 2377967 - 2378011 + T 91 -17.9 -3.10164 | opp_overlap 2377969 CCATACACGTCAGAC AACAGCAGTGGCGTTCCAGAG TAT TTCTGGAACGCCACTGCCGGG TTAGATGGTAGGTCA TERM 1169 2378009 - 2377969 - T 100 -26.4 -3.51633 | opp_overlap 2377967 ATACACGTCAGACAA CAGCAGTGGCGTTCCAGA GTATT TCTGGAACGCCACTGCCG GGTTAGATGGTAGGT PPA2195 2378509 - 2378024 - | hypothetical protein PPA2198 2379779 - 2378865 - | hypothetical protein PPA2199 2380372 - 2379767 - | hypothetical protein PPA2200 2380556 - 2381557 + | Zn-binding dehydrogenase/oxidoreductase TERM 1170 2381612 - 2381568 - f 86 -12.2 -4.09685 | opp_overlap 2381575, overlap 2381575 TCTGACGCCCTAAAA CCCACAACGACCTGTCATGG CTGGC CCATGGCAGGTCGTTTTATG TTCTAGGCGTAGCCC TERM 1171 2381605 - 2381575 - f 88 -15.5 -3.52113 | opp_overlap 2381575, overlap 2381568 CCCTAAAACCCACAA CGACCTGTCATGG CTGGC CCATGGCAGGTCG TTTTATGTTCTAGGC TERM 1172 2381575 - 2381605 + F 100 -17.7 -4.73682 | opp_overlap 2381575 2381568 CCCTAAAACCCACAA CGACCTGTCATGG CTGGC CCATGGCAGGTCG TTTTATGTTCTAGGC PPA2201 2381756 - 2383180 + | argininosuccinate synthase TERM 1173 2383187 - 2383227 + F 100 -17.5 -4.63218 | overlap 2383191 GTCAACTGATCGCCA CATGTTCGGGCCGCCCGGG ATA CCTGGTCGGCCCGAATGAG TTTTCTTGAGCCACC TERM 1174 2383191 - 2383223 + F 100 -21.3 -2.84841 | overlap 2383187 ACTGATCGCCACATG TTCGGGCCGCCCGGG ATA CCTGGTCGGCCCGAA TGAGTTTTCTTGAGC PPA2202 2383635 - 2384843 + | membrane protein, putative permease PPA2203 2387051 - 2384892 - | putative Na+/H+ antiporter TERM 1175 2385058 - 2385077 + g 76 -7 -4.4846 | TCAGCCGGATCACCA GCAGTCGC GCTA GCGGCCGC TTTATTCTTCCCTTC TERM 1176 2386058 - 2386040 - G 73 -4.4 -4.62336 | overlap 2386041 ACTGCATGGCAAAAA TCGACGCC ACC GACGCCGC CACGATTCCTCGCGG TERM 1177 2386828 - 2386817 - G 76 -5.8 -4.64766 | opp_overlap 2386820 TGCACAGCTGAAAAA TCGG TCGC CCGA GGTCACGGACTTCGC PPA2204 2387400 - 2387957 + | hypothetical protein PPA2205 2388012 - 2388785 + | HAD superfamily hydrolase PPA2206 2389175 - 2389531 + | ABC transporter, ATP-binding protein PPA2207 2389952 - 2390839 + | putative ABC transporter-associated permease TERM 1178 2391601 - 2391584 - g 72 -11.3 -3.33162 | GACGGCACCCGAGAA CTCCTGC ACGT GCAGGAG GGGACAGTCATAGTC PPA2208 2390897 - 2391763 + | putative transcriptional regulator PPA2209 2391776 - 2392516 + | hypothetical protein PPA2210 2392803 - 2394194 + | putative adhesion or S-layer protein TERM 1179 2394237 - 2394271 + T 100 -18.1 -3.75153 | gap 1, opp_overlap 2394237 TCTCACAACTAACAA TGGTCGTGGTCCCACA AGCC TGTGG-ACCACGACCA TTTACATTCCCCCAA TERM 1180 2394271 - 2394237 - T 100 -18.1 -3.8591 | gap 1, opp_overlap 2394237 TCTCACAACTAACAA TGGTCGTGGTCCCACA AGCC TGTGG-ACCACGACCA TTTACATTCCCCCAA PPA2211 2395829 - 2394342 - | purine cytosine permease-like protein TERM 1181 2394760 - 2394733 - G 87 -10.6 -4.41844 | gap 1, overlap 2394734 AAAACTTGCAGAAAA TCC-GACGACGCC GCG AGCGCCGTCAGGA CAACCACAACATTGA TERM 1182 2394758 - 2394734 - G 74 -12.1 -3.24022 | overlap 2394733 AAACTTGCAGAAAAT CCGACGACGCC GCG AGCGCCGTCAG GACAACCACAACATT TERM 1183 2395599 - 2395586 - G 78 -2.3 -5.06414 | CTTGCCCAATAAAAA GGCCA ATTA TCGCC CATACAACATCGGCC PPA2212 2397534 - 2396185 - | putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein) PPA2213 2398430 - 2397552 - | putative electron transfer flavoprotein, carnitine metabolism (FixB protein) PPA2214 2399224 - 2398463 - | putative electron transfer flavoprotein (FixA protein) PPA2215 2400499 - 2399333 - | putative L-carnitine dehydratase PPA2216 2401685 - 2400537 - | acyl-CoA dehydrogenase PPA2217 2402675 - 2401911 - | IclR family transcriptional regulator TERM 1184 2402099 - 2402114 + g 74 -6 -4.49756 | overlap 2402111 TCACCGAATCGATTT CGCGCG CCCA CCCGCG TTTTCGTGTTTCAGC PPA2218 2404114 - 2402789 - | hypothetical protein PPA2219 2405385 - 2404111 - | seryl-tRNA synthetase PPA2220 2406290 - 2405472 - | hypothetical protein TERM 1185 2405849 - 2405833 - G 73 -13.7 -2.76263 | opp_overlap 2405832 2405833 2405837, overlap 2405830 CGGACGACCGAACCA TCCCCGG CGA CCGGGGA CTTCTGATCAGCCGT TERM 1186 2405833 - 2405849 + g 72 -13.7 -2.64218 | opp_overlap 2405833 2405830, overlap 2405832 2405837 CGGACGACCGAACCA TCCCCGG CGA CCGGGGA CTTCTGATCAGCCGT aat 2407736 - 2407005 - | leucyl/phenylalanyl-tRNA--protein transferase PPA2222 2408177 - 2408437 + | hypothetical protein PPA2223 2408580 - 2408954 + | siderophore-interacting protein (fragment) uppP 2409861 - 2409007 - | undecaprenyl pyrophosphate phosphatase PPA2225 2410591 - 2410073 - | ferritin PPA2226 2411560 - 2410922 - | hypothetical protein TERM 1187 2411833 - 2411860 + r 91 -17 -3.61239 | opp_overlap 2411833 TGGTGACGGAGCAAA GGGAGGGCACCC AGTT GGATGCCCTCCC TTATGTCTGCGTGTA TERM 1188 2411860 - 2411833 - R 100 -19.2 -3.76224 | opp_overlap 2411833 TGGTGACGGAGCAAA GGGAGGGCACCC AGTT GGATGCCCTCCC TTATGTCTGCGTGTA PPA2227 2412332 - 2411883 - | 50S ribosomal protein L9 rpsR 2412585 - 2412346 - | 30S ribosomal protein S18 PPA2229 2413266 - 2412712 - | single-strand DNA-binding protein rpsF 2413684 - 2413394 - | 30S ribosomal protein S6 TERM 1189 2414072 - 2414105 + r 100 -14.8 -4.8543 | TGACGCATGACGACG CATCTCTCTCTTAC CGATCA GTAAGAGGGAGATG TTTTTGTGGGGATTG PPA2231 2414568 - 2414206 - | hypothetical protein PPA2232 2415228 - 2414767 - | PTS system, fructose/mannitol specific IIA subunit PPA2233 2416811 - 2415252 - | PTS system, fructose-specific IIBC component TERM 1190 2416968 - 2416952 - R 79 -5.7 -4.72272 | CCTGGCGACGAAAAA CCCCGGC CCA GGCGAGG GTGGAGCACGGTAGT PPA2234 2419055 - 2417121 - | putative long-chain-fatty-acid--CoA ligase/synthetase PPA2235 2419927 - 2419172 - | endonuclease IV TERM 1191 2420024 - 2419990 - H 75 -10.6 -3.74747 | opp_overlap 2419989, overlap 2419979 GGAACGCTGACGAAA GTCGCTGCGATGATGG TGA CCATCCCCGCAGTGCC GTAGATTGGACGGTA PPA2236 2420039 - 2420848 + | short chain dehydrogenase TERM 1192 2421044 - 2421057 + G 70 -3.1 -4.58283 | gap 1 CCATTCCTCCCACCT CGACGC GCC GC-TCG TTTTTGGGGCCCTTC PPA2237 2420850 - 2421701 + | putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PPA2238 2421701 - 2422183 + | putative transcriptional regulator PPA2239 2423447 - 2422254 - | hypothetical protein PPA2240 2425985 - 2423727 - | cation-transporting ATPase TERM 1193 2424405 - 2424395 - G 70 -4.6 -4.57569 | GGATGGCGTCAAAAA GCGA CAC CCGC CCAGCCTTGGCCGGC TERM 1194 2424922 - 2424902 - G 74 -3.9 -4.82901 | CTGTCGGCACAAAAA TCGACGAGA CTT TGTCGGCGA GATCCTGGGTCTTAG TERM 1195 2426147 - 2426095 - R 79 -13.2 -3.29324 | TGTAGGGAAAGTCAA CGTCGGGGGTCGGGGTCTGACGGC GTCAT GCGGTCCGAACCCGGGGCCCGACG TCAAGATCTCAACGG PPA2242 2426566 - 2426174 - | putative metal-associated protein (copper chaperone) PPA2243 2426988 - 2426590 - | hypothetical protein TERM 1196 2428204 - 2428170 - g 91 -13.6 -3.71848 | CGCCGCGATCAAGAA CCATCTCGCAGCTGCA ATC TTCAGCCTCGAGATGG GGCGCAACGAGATCG PPA2244 2427460 - 2428806 + | replicative DNA helicase PPA2245 2428857 - 2429858 + | zinc-binding dehydrogenase PPA2246 2430005 - 2430322 + | hypothetical protein PPA2247 2430319 - 2430894 + | 3-methyladenine DNA glycosylase TERM 1197 2431145 - 2431111 - T 81 -12.7 -3.62572 | overlap 2431112 CAGCAGCACGTGAAA GGGCCGGGGCCCGCC CCCAC AGCAGGTCCCGGCCG ACTCCGGATCGCAGG TERM 1198 2431144 - 2431112 - T 86 -16.2 -2.77222 | overlap 2431111 AGCAGCACGTGAAAG GGCCGGGGCCCGCC CCCAC AGCAGGTCCCGGCC GACTCCGGATCGCAG glpC 2432471 - 2431221 - | sn-glycerol-3-phosphate dehydrogenase subunit C PPA2249 2433817 - 2432474 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 1199 2433070 - 2433086 + g 70 -12.3 -2.8474 | opp_overlap 2433072, overlap 2433072 2433079 GGATCTTCTTGAAGT CAGCGAG GAC CTCGCTG TGGTTATCGATGCCG PPA2250 2435448 - 2433814 - | anaerobic glycerol-3-phosphate dehydrogenase subunit A TERM 1200 2435737 - 2435703 - R 73 -2.9 -4.74013 | gap 1, overlap 2435705 TTTAAATATAGAAAA CAGGAC-TGCGGAAAT AGCC ACTTCCACACGCCTTG AGACAATTCTGACCG PPA2251 2436830 - 2435865 - | D-isomer specific 2-hydroxyacid dehydrogenase, putative D-3-phosphoglycerate dehydrogenase PPA2252 2436888 - 2437412 + | MarR family transcriptional regulator TERM 1201 2438240 - 2438258 + G 71 -6.6 -4.20769 | CTACTGGGCCTCACT GCTGGCCT CAT GGGCAAGC TTTATGTTGAGGTCT PPA2253 2437409 - 2439136 + | putative chloride channel PPA2254 2440545 - 2439139 - | amino acid permease, putative GABA permease TERM 1202 2440217 - 2440173 - G 80 -11.9 -3.80018 | opp_overlap 2440172 2440175, overlap 2440174 GCCACATAGCAACAA GGGTCGACGCCGCCGCGATCG CCT CGGCCGCGACGACGACGACTA GTTCGATCCACCAGA TERM 1203 2440216 - 2440174 - G 81 -15.4 -2.87529 | opp_overlap 2440172 2440175, overlap 2440173 CCACATAGCAACAAG GGTCGACGCCGCCGCGATCG CCT CGGCCGCGACGACGACGACT AGTTCGATCCACCAG TERM 1204 2440175 - 2440215 + g 77 -14.5 -2.75064 | opp_overlap 2440174 2440173, overlap 2440172 CACATAGCAACAAGG GTCGACGCCGCCGCGATCG CCT CGGCCGCGACGACGACGAC TAGTTCGATCCACCA PPA2256 2441194 - 2440661 - | MarR family transcriptional regulator PPA2257 2441486 - 2442670 + | putative DNA repair exonuclease or phosphoesterase TERM 1205 2442978 - 2442949 - g 74 -10.9 -3.53343 | gap 1, opp_overlap 2442959, overlap 2442954 AAGTGCTTTCTCAAA GACAAGGAATCTTC ACT GAAG-TTCCTTGCC GGGCCTCGTGCTGGC TERM 1206 2444479 - 2444468 - g 80 -3.6 -5.03314 | overlap 2444453 2444470 TCGACGCTGAAAAAA CCGC CGAA ACGG TCACCAGGCTTTCTA PPA2258 2442667 - 2445273 + | putative ATPase involved in DNA repair PPA2259 2446679 - 2445333 - | hypothetical protein TERM 1207 2446491 - 2446478 - G 88 -2.3 -5.54338 | overlap 2446479 CAAGGAAAACAAAAA GCCCT GTGA AGGTC GTCAAGGCCGCCGAA TERM 1208 2446613 - 2446603 - G 74 -6.8 -4.33819 | overlap 2446604 ATCAGGGACAAGAAA GCAG GCA CTGC CAGATTCAGAATCTG PPA2260 2447326 - 2446679 - | TetR family transcriptional regulator TERM 1209 2446806 - 2446794 - G 79 -9.1 -4.20531 | GACAGCGACGCAAAA CCGTG AAG CACGG ACCACAGAAGAATGA PPA2261 2447463 - 2448335 + | 4-amino-4-deoxychorismate lyase TERM 1210 2448613 - 2448599 - g 78 -2.1 -5.02074 | gap 1, overlap 2448601 GTAGGTGCGAAAAAA GTC-GC TATG GCTGAC CCAGCGGCAGCAGAG TERM 1211 2448722 - 2448679 - g 100 -8.9 -4.82901 | gap 2, opp_overlap 2448715 2448716 CTTGGGGCAGAAAAA GCGGCTACCCATCTGCATCGA CGAG TCGGTGCT-A-GGGCAGCCGC GGGTGCTGGTTTCAG PPA2262 2448335 - 2448823 + | putative transcriptional regulator PPA2263 2449234 - 2448836 - | hypothetical protein PPA2264 2449800 - 2449264 - | hypothetical protein PPA2265 2450417 - 2449797 - | hypothetical protein TERM 1212 2450058 - 2450044 - G 71 -7 -4.26076 | opp_overlap 2450044 2450035 2450046 CCATCCTCAGTAAAA GCCGCG TGC CGCGTC TTGTATTGAATCTTG TERM 1213 2450540 - 2450524 - H 83 -5.7 -4.90079 | overlap 2450525 AGGGCAACAAGAAAA CCGCCGC CAC GCCACGG GCCTGAGCCGACGCG nadE 2450920 - 2452989 + | NAD synthetase TERM 1214 2453098 - 2453084 - f 75 -4.2 -4.7254 | ACCGGTGACGAAAAA TCCCAG CAG CCAGGA CGAGCAGTCACAATT PPA2267 2453168 - 2455414 + | 6-phosphofructokinase, type C PPA2268 2456593 - 2455481 - | alanine dehydrogenase TERM 1215 2456459 - 2456448 - G 74 -5.8 -4.43844 | overlap 2456450 CCAGCACCCACAAAA TCCG AATC CGGA ATACCCGAACCCACA TERM 1216 2457462 - 2457482 + G 74 -12.5 -3.23822 | overlap 2457460 GGGTTCCAGCCACCC CGCAGCGGG GTT CCGGCTGCG TCATTTTCTCATTTG PPA2269 2456880 - 2458379 + | D-serine/D-alanine/glycine transporter PPA2374 2458479 - 2458682 + | hypothetical protein TERM 1217 2458664 - 2458685 + F 79 -5.9 -4.82901 | gap 1, opp_overlap 2458642 GGCCCCGGCCGATCC TCGT-GAGCC AGT GGCTTGACGA TTTTTGTCAGGCCCA PPA2375 2458679 - 2458993 + | hypothetical protein PPA2377 2459052 - 2459327 + | hypothetical protein PPA2376 2459363 - 2459488 + | hypothetical protein TERM 1218 2460107 - 2460091 - g 72 -3 -4.72986 | overlap 2460102 GACGGTGACCAAAAA CATCAA GAGCA TCGATG GCGCCGTCAACGTCG TERM 1219 2460487 - 2460452 - g 74 -6.8 -4.29508 | ATTTACATCAACAAA CACAAGATGGACGTCC TCCA GGACGGCAACGTTGTG CGCACGATCCCGGTG PPA2270 2459612 - 2460895 + | putative secreted lipoprotein TERM 1220 2460915 - 2460951 + F 85 -16.7 -2.70826 | opp_overlap 2460920, overlap 2460920 GTCCCCTCATACCTG CGAAACCCTCTACCTCG ATG CAAGGTAGAGGGTTTCA TCATGTCTAGGTGTC TERM 1221 2460920 - 2460946 + F 100 -15.2 -3.83409 | opp_overlap 2460920, overlap 2460915 CTCATACCTGCGAAA CCCTCTACCTCG ATG CAAGGTAGAGGG TTTCATCATGTCTAG TERM 1222 2460946 - 2460920 - f 95 -17.4 -3.56643 | opp_overlap 2460920 2460915 CTCATACCTGCGAAA CCCTCTACCTCG ATG CAAGGTAGAGGG TTTCATCATGTCTAG PPA2271 2461136 - 2462632 + | lipoprotein A family protein PPA2272 2462927 - 2464213 + | citrate synthase 1 TERM 1223 2464220 - 2464253 + F 100 -21.1 -2.9914 | opp_overlap 2464220 2464236 CGTGCCTGACGTAAA CCGGCCTGGGAGG AAACTCGA CCTCCCAGGCCGG TGTGTCTAAGGACTC TERM 1224 2464253 - 2464220 - f 100 -21.1 -3.64703 | opp_overlap 2464220, overlap 2464236 CGTGCCTGACGTAAA CCGGCCTGGGAGG AAACTCGA CCTCCCAGGCCGG TGTGTCTAAGGACTC TERM 1225 2464362 - 2464384 + F 83 -4.8 -5.06414 | overlap 2464357 CGGATCATCAGGGTG TCCCGACC ACCCTTC GCTCGGGA TTTTTGTTCACCAGA PPA2273 2464452 - 2465477 + | adenosine deaminase PPA2274 2466636 - 2465524 - | alanine dehydrogenase TERM 1226 2466502 - 2466491 - G 74 -5.8 -4.43844 | overlap 2466493 CCAGCACCCACAAAA TCCG AATC CGGA ATACCCGAACCCACA PPA2275 2467817 - 2466810 - | AsnC family transcriptional regulator TERM 1227 2467060 - 2467093 + g 72 -10.9 -3.32946 | opp_overlap 2467053, overlap 2467058 ATACATGAGCGCAAT CCCGACTGCTGGCGC AACA GCTCCAGCACTCGAG TCTTGTGGTTAAGAG TERM 1228 2467335 - 2467360 + g 76 -7.5 -4.54477 | AAGCATCCATAACTC TCCTGGTCGGG GGCC CCTGGCAAGGA TTTTCTCCGTTTTAC PPA2276 2468111 - 2469154 + | oxidoreductase PPA2277 2469166 - 2469513 + | hypothetical protein PPA2278 2469510 - 2470931 + | putative threonine synthase / cystathionine beta-synthase PPA2279 2470931 - 2471353 + | D-ornithine aminomutase S component TERM 1229 2471523 - 2471491 - g 82 -11.3 -3.92324 | GGCCCGAATACCAAA CTCAATGTCGAGGAG ATC CTCACCGACCTTGAG CACTACCACCCCCGT PPA2280 2471350 - 2473668 + | D-ornithine aminomutase E component PPA2281 2473674 - 2475104 + | methylaspartate mutase PPA2282 2475101 - 2476189 + | amino acid racemase PPA2283 2476228 - 2477703 + | D-serine/D-alanine/glycine transporter PPA2284 2478067 - 2479581 + | D-serine/D-alanine/glycine transporter TERM 1230 2479752 - 2479771 + F 87 -15 -3.26719 | opp_overlap 2479743, overlap 2479747 2479745 ACTCAACCCGGCCCC GCACCGGG CCAA CCCGGTGC TTCGCTATTTCTGAC PPA2285 2479808 - 2480935 + | alanine racemase 1 PPA2286 2482549 - 2481125 - | phosphoglucomutase/phosphomannomutase PPA2287 2483856 - 2482666 - | galactokinase PPA2288 2484689 - 2483853 - | glucose-1-phosphate thymidylyltransferase TERM 1231 2485033 - 2485011 - g 70 -3.2 -4.72386 | overlap 2485012 2485013 CAAACGAGTCAAAAA CGGTGGGCAC CAC GAGTCCACCT CGGACAAGCAAAATC TERM 1232 2485512 - 2485496 - g 70 -4.3 -4.56597 | opp_overlap 2485503 2485505, overlap 2485468 2485497 CTGCCCCGGCAAAAA TCGCCCG CGG CAGCCGA TTCGACGACAACCGA PPA2289 2484814 - 2485641 + | hypothetical protein PPA2290 2485838 - 2485647 - | hypothetical protein PPA2291 2486701 - 2485835 - | hypothetical protein TERM 1233 2488200 - 2488185 - g 71 -5.4 -4.41241 | overlap 2488174 CAAACCCCGACAAAA TCAAGG AGAA CCTCGA CAAGAACCTCATGCA fumC 2486987 - 2488393 + | fumarate hydratase TERM 1234 2488453 - 2488414 - T 100 -30.2 -2.82635 | opp_overlap 2488414 ATCGCCACGACGACA CGTCGGGCCGGTCACTGC ATCG ACAGTGACCGGCCCGACG TTTTTGTGCACAGAG TERM 1235 2488414 - 2488453 + T 100 -29.5 -4.82901 | opp_overlap 2488414 ATCGCCACGACGACA CGTCGGGCCGGTCACTG CATCGA CAGTGACCGGCCCGACG TTTTTGTGCACAGAG PPA2293 2489525 - 2488614 - | binding-protein-dependent transport system TERM 1236 2489396 - 2489385 - G 78 -4.4 -4.76041 | GATAGGCAGCAAAAA GTAG CAAG CTAC AACGGCCAAGATCAC PPA2294 2490435 - 2489527 - | binding-protein-dependent transport system TERM 1237 2490644 - 2490592 - R 79 -7 -4.64657 | gap 1 CCAAACCGGCAAAAA TGATCGG-TCCGGACTGCGCACG CCGCTACC CTCGCCCAACCCGGAGCCGACCA CCTTGCGTGAAAATC PPA2295 2491992 - 2490658 - | solute-binding lipoprotein TERM 1238 2492520 - 2492542 + G 85 -17 -2.84098 | overlap 2492518 2492504 CCCTCGTCGATTCTT CCCGATCCGC TGA GCGGGTCGGG TCATTGATTGCCGGG PPA2296 2492189 - 2493196 + | transcription regulator CelR PPA2297 2493897 - 2493205 - | hypothetical protein TERM 1239 2494416 - 2494428 + G 71 -5.5 -4.35461 | opp_overlap 2494416 ACGCTCGTCAAAGAC GTCCT GGC GGGAC TTTTCATCATCTTCG PPA2298 2494023 - 2494880 + | putative mechanosensitive ion channel TERM 1240 2495002 - 2495028 + T 78 -9.4 -4.08692 | CCCCACGACGTGACA GTTTTCGACGTC GCA GACGTCGGACGC TTTTCCGGCAGGTTC PPA2299 2496258 - 2495050 - | glycerate kinase PPA2300 2496309 - 2496563 + | hypothetical protein PPA2301 2496645 - 2498168 + | putative RNA nucleotidyltransferase PPA2302 2498211 - 2500352 + | hypothetical protein TERM 1241 2501396 - 2501383 - g 70 -3.8 -4.59773 | TCTCAGGCCGAAAAA GACC CGTGGT GGTC AGACGAATCCTCGGC PPA2303 2500420 - 2502231 + | serine-threonine protein kinase TERM 1242 2502556 - 2502508 - T 74 -13.9 -2.53012 | gap 1, opp_overlap 2502507, overlap 2502507 AATGGCACGAGGAAC TGGACGCAGTGGTGCCCCGCGC TGGAAG GCACGGGGCACCACCT-GTCAA CAGTTCATCAGGATC PPA2304 2504128 - 2502581 - | glycerol kinase 2 PPA2305 2504941 - 2504189 - | glycerol uptake facilitator protein PPA2306 2505130 - 2506077 + | transcriptional regulator TERM 1243 2506132 - 2506093 - T 77 -10.7 -3.92373 | opp_overlap 2506099, overlap 2506094 GAGCGCAGGTAGAAA TTCGAACTCTCCGCAGC ACATCG GCTGCGGAGAGTTGGCT GTGTTACTGCCAAAA TERM 1244 2506131 - 2506094 - T 82 -14.2 -2.95102 | opp_overlap 2506099, overlap 2506093 AGCGCAGGTAGAAAT TCGAACTCTCCGCAGC ACATCG GCTGCGGAGAGTTGGC TGTGTTACTGCCAAA TERM 1245 2506099 - 2506126 + T 90 -17.1 -3.19889 | opp_overlap 2506094 2506093 AGGTAGAAATTCGAA CTCTCCGCAGC ACATCG GCTGCGGAGAG TTGGCTGTGTTACTG PPA2307 2507587 - 2506148 - | trypsin-like serine protease TERM 1246 2506332 - 2506320 - G 70 -10.5 -3.53012 | TCGCCTCGGCGCAAA CCGGC CTT GCCGG CAGCCGAACTCGGAA TERM 1247 2507307 - 2507321 + g 78 -2.1 -5.06414 | gap 1, overlap 2507310 GATCGAGACGAGGGC TG-CGG CGAG CCGGCA TTTTTGTTACCAAGG PPA2308 2508362 - 2507691 - | alpha-L-arabinofuranosidase PPA2309 2508494 - 2509546 + | thioredoxin reductase TERM 1248 2509560 - 2509598 + T 100 -20.5 -2.62184 | GAGGTACTCGACAGT TTTCGCCGCACCACC CGCGCGCAA GGTGGTGCGGCGAAA TGCTGTGCGGGCGCC TERM 1249 2509642 - 2509654 + T 76 -3.3 -4.90455 | opp_overlap 2509638 GGTATAGGTAAGCGG CATGC GGC GCAGG TTTTTCTCGCTGTCT PPA2310 2510916 - 2510029 - | putative RNA pseudouridylate synthase TERM 1250 2511176 - 2511192 + H 72 -5.1 -4.63218 | opp_overlap 2511177, overlap 2511177 GTCGTGTTCTACAAT ACCTAGT GCT ACTAGGG TTTTGTTAAGGGCGG PPA2311 2511243 - 2512490 + | putative sucrose symporter TERM 1251 2512569 - 2512550 - g 76 -7 -4.51994 | overlap 2512543 2512551 2512563 CGAAGGAAGAACAAA CGCTCGCC GAGA AGCGGGCG CGTCAGAATGACGTG TERM 1252 2512589 - 2512563 - g 76 -12.2 -3.29043 | overlap 2512550 2512551 AACGCTCGCCGAGAA GCGGGCGCGTCA GAA TGACGTGGCCGC CCGCCTGCGGGGAAA TERM 1253 2512732 - 2512745 + G 73 -5.2 -4.65747 | opp_overlap 2512710 CCAGTACTGGTATGG GCCC ACGGCG GGGC TTTTGTTCACGGTTC PPA2312 2512492 - 2513421 + | lipase/esterase TERM 1254 2513469 - 2513432 - T 100 -16.3 -4.09685 | gap 1, opp_overlap 2513430 2513424 2513435 CCTGATGCCGTAAAA CGGCCGGGCCCGG-GA TTTTTCG TCACCGGGTCCGGCCG CCTCGGTTCCTGTGG TERM 1255 2513539 - 2513517 - T 72 -4.7 -4.56597 | overlap 2513502 2513519 CGCTCCGCGTAAAAA CGCGGCGAG AACGA CCCGCCAGG AAACCTCAGTCCAAC PPA2313 2513982 - 2513545 - | OsmC-like protein PPA2314 2514471 - 2513992 - | thioredoxin PPA2315 2515626 - 2514559 - | glycerol-3-phosphate dehydrogenase [NAD(P)+] TERM 1256 2515820 - 2515844 + r 70 -3.6 -4.62069 | gap 1, overlap 2515833 TACACAAACCACCGC GCAG-GGCT ACCCCCAG AGCCTCTGC TTTTTCGGCTCCGGA PPA2318 2518700 - 2516637 - | transketolase TERM 1257 2517962 - 2517990 + g 74 -11.7 -3.44527 | TAACAGTCTTGGCGT TGTCGATGGCCTC CAT GAGGGCTTCGACA TTCTCCTCGTAGGTC PPA2319 2520600 - 2518837 - | ribulokinase TERM 1258 2520605 - 2520567 - G 82 -14.6 -3.14132 | CCTCCTCGCGAGGAA GTCGGGTGGCGCCG GGGCGAGTGGT CGGCCCCACCCGAC GTCGTCCTGGTACTC PPA2320 2521983 - 2520619 - | L-arabinose utilization protein, glycerol dehydrogenase PPA2321 2523571 - 2521967 - | sugar kinase, putative xylulose kinase PPA2322 2524485 - 2523628 - | L-arabinose operon protein, hydrolase PPA2323 2525653 - 2524508 - | hypothetical protein TERM 1259 2524888 - 2524868 - G 71 -5.3 -4.41895 | opp_overlap 2524878 AATGCCGAAGCAAAA GCTGTTGGC GTT GGCAGCAGC CAGATTGTTGGCGAG TERM 1260 2525264 - 2525251 - G 75 -8.1 -4.17425 | ACAAGTAGCCGAAAA TGCCG AAGG CGGCA CCGACGCAGAGGATG PPA2324 2526213 - 2525731 - | ribose 5-phosphate isomerase PPA2325 2526948 - 2526430 - | L-ribulose-5-phosphate 4-epimerase PPA2326 2527806 - 2527000 - | DeoR family transcriptional regulator PPA2327 2529153 - 2528080 - | mannonate dehydratase TERM 1261 2528285 - 2528301 + g 75 -2.9 -5.00616 | opp_overlap 2528283, overlap 2528287 CCGTCGCTGGAAAGA TGCGAGG CCT CCTTGAA TTTTTTCGACCCCAG TERM 1262 2528524 - 2528514 - G 71 -6.8 -4.14392 | GCGGAATTCCGAAAA TGCC CCA GGCA GGATCATCAGGGTGG PPA2328 2530745 - 2529156 - | D-mannonate oxidoreductase TERM 1263 2529232 - 2529222 - G 90 -5.4 -5.252 | TAGGCGGATAAAAAA TCGT TCA ACGA CGTCAGATAAAGGTG PPA2329 2532173 - 2530761 - | glucuronate isomerase TERM 1264 2530939 - 2530918 - G 78 -5.1 -4.77157 | GGAATTGAGCAAAAA GCACGAGTG TCGT CAATCATGC CGCTCACCCGACTGA PPA2330 2533245 - 2532238 - | LacI family transcription regulator PPA2331 2533422 - 2534846 + | glucuronide permease PPA2332 2534866 - 2537358 + | putative glucosidase PPA2333 2537391 - 2539172 + | beta-D-glucuronidase PPA2334 2539276 - 2542677 + | hypothetical protein TERM 1265 2542681 - 2542716 + TF 85 -15.4 -3.07013 | overlap 2542684 AACTTCCGCTGAGGT TGGTCGGCCCCGCGTG TCAT CACCTGGGGCCGATCG TCTGTTACCCAGGTC TERM 1266 2542684 - 2542713 + TF 86 -15.7 -2.7535 | overlap 2542681 TTCCGCTGAGGTTGG TCGGCCCCGCGTG TCAT CACCTGGGGCCGA TCGTCTGTTACCCAG TERM 1267 2542823 - 2542878 + GT 78 -6.7 -4.58663 | opp_overlap 2542823 CCTTGTGACGAAAAA TCCCGCCTCGG-GTGGGGTCACAACAC TTGA GTGCC-TCGCCCCTCACCGTGGCGGGA TTTTTCGCACCTCAT TERM 1268 2542878 - 2542823 - gT 100 -12.5 -4.72272 | opp_overlap 2542823 CCTTGTGACGAAAAA TCCCGCCTCGG-GTGGGGTCACAACAC TTGA GTGCCTCG-CCCCTCACCGTGGCGGGA TTTTTCGCACCTCAT PPA2336 2544277 - 2543591 - | hypothetical protein PPA2335 2542812 - 2543645 + | hypothetical protein PPA2337 2544421 - 2545818 + | aminotransferase TERM 1269 2545938 - 2545948 + F 78 -8.2 -4.41616 | opp_overlap 2545912, overlap 2545937 CGACTTTGAGCTCGC CCCG TAG CGGG TTTGTTTCAAACAAT TERM 1270 2546634 - 2546620 - gf 71 -5.7 -4.36914 | CTCGGCGTCACAAAA GTCGA TGGCG TCGAC GATCTTCCTCAGGCC PPA2338 2546113 - 2547096 + | D-alanine--D-alanine ligase B PPA2339 2547071 - 2547805 + | membrane-associated protein PPA2340 2547802 - 2548374 + | membrane-associated protein TERM 1271 2548579 - 2548614 + T 79 -12.6 -3.19442 | overlap 2548572 2548573 CAGGGTTCGGCGTGA CGCCTTTGGCCACG CTCTCTTC CGTGGCCGAACGCG TTCAGTGTCTTACCT PPA2341 2549552 - 2548632 - | chromosome partitioning protein ParB PPA2342 2550541 - 2549555 - | chromosome partitioning protein ParA PPA2369 2550824 - 2550603 - | hypothetical protein PPA2370 2550928 - 2551158 + | hypothetical protein PPA2371 2551746 - 2552111 + | hypothetical protein PPA2343 2552108 - 2552338 + | hypothetical protein gidB 2552994 - 2552368 - | glucose-inhibited division protein B PPA2345 2553640 - 2553440 - | hypothetical protein PPA2373 2553646 - 2554032 + | hypothetical protein PPA2372 2554307 - 2554750 + | hypothetical protein PPA2346 2556008 - 2554980 - | putative alanine racemase PPA2347 2557101 - 2556010 - | FemAB family protein PPA2348 2557343 - 2557146 - | hypothetical protein TERM 1272 2557337 - 2557305 - G 100 -25 -3.89501 | GAAGACTGGCACAAA GAGGAGGGCCCGGT TACTC ACCGGGCCCTCCTC AATCACTCATCACTG PPA2349 2557958 - 2557347 - | jag-like protein PPA2350 2559090 - 2558011 - | putative inner membrane protein translocase component YidC TERM 1273 2558924 - 2558910 - G 74 -5.7 -4.5287 | overlap 2558920 GCAAACGAATGAAAA TCGTC AGACA GACGA TGGCTAACGTCCACG PPA2351 2559593 - 2559090 - | hypothetical protein TERM 1274 2559134 - 2559157 + gr 73 -12.5 -2.77781 | overlap 2559131 TACCCGTGTGGGTAC TCCCCGGAT CGGTGT ATCCGGGGA TGGATTTTCGTAGGG PPA2352 2559820 - 2559563 - | ribonuclease P protein component TERM 1275 2559870 - 2559837 - R 76 -11.9 -3.40899 | gap 1, opp_overlap 2559835 2559838 2559840, overlap 2559824 2559842 AATGGTTCACCAGAA CCACAGTTACCCACAG GTG CTGTGGATAACT-CGG TCTTATCAGCTGAGT TERM 1276 2559866 - 2559842 - R 77 -13.7 -2.98072 | opp_overlap 2559840 2559838 2559835, overlap 2559837 TTCACCAGAACCACA GTTACCCACAG GTG CTGTGGATAAC TCGGTCTTATCAGCT PPA2353 2560150 - 2560016 - | 50S ribosomal protein L34