TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.489943 %AT, 2199915 nt, 17885 terms. Intergenic: 0.550921 %AT, H2T: 269036 nt, 2176 terms; T2T: 65361 nt, 1257 terms; H2H: 88013 nt, 1215 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|194332853|ref|NC_011059.1| Prosthecochloris aestuarii DSM 271, complete genome (length 2512923) TERM 1 449 - 435 - g 85 -2.8 -5.40072 | overlap 420 GCGTTTTGAAAAAAA TCGCAT TAA ATTCGA AAGTCATCTTAATCC Paes_0001 1 - 1479 + | chromosomal replication initiator protein DnaA Paes_0002 1749 - 2876 + | DNA polymerase III, beta subunit TERM 2 3078 - 3107 + G 100 -14.5 -4.42806 | opp_overlap 3070 3078 TCGACAATGCATGAA CTTTTCAGCAGAG TCTT TTCTGCTGAAAAG TTTGTTTACCAGTGA TERM 3 3107 - 3078 - g 89 -13.8 -3.23711 | opp_overlap 3078, overlap 3070 TCGACAATGCATGAA CTTTTCAGCAGA GTCTTT TCTGCTGAAAAG TTTGTTTACCAGTGA Paes_0003 2893 - 4005 + | DNA replication and repair protein RecF Paes_0004 4005 - 4295 + | hypothetical protein TERM 4 4283 - 4301 + T 81 -3.2 -5.43487 | overlap 4285 GCTTGTTCGTGATAT TGTTTTTC AGT GAAAAAAA TTTTTTGTATGGTTT TERM 5 4345 - 4330 - T 93 -10.4 -5.08824 | opp_overlap 4330 TTGTGATGCAAAAAA GGGGTC AGAT GACCCC TTTTTTTTGCTTTTA TERM 6 4330 - 4345 + T 100 -10.4 -6.07969 | opp_overlap 4330 TTGTGATGCAAAAAA GGGGTC AGAT GACCCC TTTTTTTTGCTTTTA Paes_0005 5590 - 4367 - | beta-lactamase domain protein TERM 7 4852 - 4867 + g 82 -2.6 -5.40072 | gap 1, opp_overlap 4854, overlap 4853 4854 CATTCGGCAGCGCAA TA-GCTC CCT GAGCATA TTTTTTTGAAAGAGC TERM 8 5672 - 5705 + r 70 -5.4 -4.43037 | opp_overlap 5677, overlap 5677 CAGTGATTGATCCTT TAAAGTTCCAGTCA ATAAGA TGTCTGGAATTTTG TTTGCTTTTTGTTAG TERM 9 5677 - 5700 + r 79 -5.3 -5.10516 | opp_overlap 5677, overlap 5672 ATTGATCCTTTAAAG TTCCAGTCA ATAAGA TGTCTGGAA TTTTGTTTGCTTTTT Paes_0006 8191 - 5789 - | DNA polymerase B region Paes_0007 10123 - 8261 - | glucose inhibited division protein A TERM 10 10140 - 10155 + H 78 -6.2 -4.72272 | opp_overlap 10154 AGTTTCTTTCCTTGA TGTTTC ACGT GAAACA TTTTTCCTGAGGCAG TERM 11 10650 - 10663 + H 73 -4.5 -4.85545 | TCCCGTAAGCTGATC GGGCT GTGC AGTCC TTTTATTAATTTCGT Paes_0008 10694 - 11131 + | thiosulfate-binding protein SoxY Paes_0009 11156 - 11464 + | Sulphur oxidation protein SoxZ Paes_0010 11525 - 11905 + | cytochrome c class I TERM 12 12598 - 12583 - g 70 -6.2 -4.19506 | AGCCTAATTCCAAAA TCATCA TTCT TGATGA TAAAGAGAAGTTTTC Paes_0011 11922 - 13214 + | Flavocytochrome c sulphide dehydrogenase flavin-binding TERM 13 13270 - 13226 - f 81 -11.6 -3.13728 | gap 1, opp_overlap 13231 13239, overlap 13239 ATGATCCAGATGCAA CACAG-CAGAAAAACCCGGCA TTAC CGCCGGGTTTTTTTGTCTCTG ATTTCCGGACTGCTC TERM 14 13231 - 13264 + F 100 -16.2 -3.05769 | opp_overlap 13226 13239, overlap 13239 CCAGATGCAACACAG CAGAAAAACCCGGC ATTACC GCCGGGTTTTTTTG TCTCTGATTTCCGGA TERM 15 13239 - 13256 + F 100 -9.8 -5.76633 | opp_overlap 13226 13239, overlap 13231 AACACAGCAGAAAAA CCCGGC ATTACC GCCGGG TTTTTTTGTCTCTGA TERM 16 13256 - 13239 - f 93 -10.5 -4.97666 | opp_overlap 13239 13231, overlap 13226 AACACAGCAGAAAAA CCCGGCA TTAC CGCCGGG TTTTTTTGTCTCTGA TERM 17 14338 - 14321 - g 93 -4 -5.52986 | ATCTGATCAAAAAAA CGCCGG AGCTCA CTGGCG GAGTGATTACCGAAG Paes_0012 13381 - 15165 + | protein-export membrane protein SecD Paes_0013 15190 - 16119 + | protein-export membrane protein SecF TERM 18 16167 - 16196 + F 71 -10.1 -2.77895 | overlap 16166 16169 CCGCTATCATTGTGT GATGCTTTGCC TTTAAGCC GGCAAGGCATC CTTATTGAACGTAAG Paes_0014 16227 - 17546 + | SurA domain Paes_0015 19469 - 17535 - | DNA gyrase, B subunit TERM 19 18964 - 18982 + g 85 -10.4 -4.27584 | overlap 18958 GTTTTTGTGCCGGTT TTATCGGT TTC ACCGATAA TTTTGACTTCGCACT Paes_0016 19944 - 19561 - | protein of unknown function UPF0102 Paes_0017 20579 - 19959 - | Ribonuclease H Paes_0018 20672 - 20863 + | hypothetical protein TERM 20 21829 - 21817 - g 70 -5.5 -4.35524 | GCCTGAAATGGAAAA GAACG TCA CGCTC TATCAGGGCAAACTT Paes_0019 20912 - 22567 + | ribonuclease, Rne/Rng family Paes_0020 22582 - 23445 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Paes_0021 23505 - 25175 + | carboxyl-terminal protease Paes_0022 25851 - 25177 - | hypothetical protein Paes_0023 26991 - 25852 - | geranylgeranyl reductase TERM 21 26291 - 26303 + g 83 -5.5 -5.09895 | overlap 26301 TCGAGATATGGCTTG TCGGT GAT GCCGA TTTTTTCAATAAATC TERM 22 26681 - 26657 - G 74 -10.7 -3.21395 | overlap 26655 ATCTCCCTGACAAGA GCCTCGACG ATATCGG CGCCGAGGC GAACTGCCCGGTCCC Paes_0024 28520 - 27054 - | glycyl-tRNA synthetase TERM 23 27320 - 27332 + g 71 -9.1 -3.53091 | overlap 27317 CTTTTTTCATCAGTG GCAGC ACC GCTGC TTTGACCGGGGCGAT TERM 24 28124 - 28151 + g 70 -3.5 -4.72333 | gap 1, overlap 28121 28120 28141 28142 AGCTTATTCTCTGGG CTTCGTCCGT TTTTCCGTC ACGG-CGAAG TTTTTCGATGTGGTT TERM 25 28716 - 28737 + H 77 -4.5 -5.06816 | TTAGGGTCAAGAGAG CGTCTTT GCAGGAAA AAAGACG TTTTTCTTGACAGGT TERM 26 29312 - 29323 + G 100 -2.2 -5.93809 | GGCGTCTCTCCCTCC GTTG CCGA CAGC TTTTTTTTGTCCGGG Paes_0025 28904 - 29377 + | Rhodanese domain protein Paes_0026 29460 - 29696 + | SirA family protein TERM 27 30670 - 30684 + G 70 -6.4 -4.1552 | overlap 30661 CTTTATCTCGGGGGC GGATTC CCG GAGTCC TTTCTTGGCCAACTG TERM 28 31033 - 31045 + G 72 -4.7 -4.72986 | TATGGCATTACCGGT GCCCG GGA CGGTC TTTTTCATCGCAATC Paes_0027 29764 - 31158 + | cobyrinic acid a,c-diamide synthase TERM 29 31503 - 31517 + F 76 -5.6 -4.86385 | overlap 31506 CATGTCCGGGAGTTG CCCGGA GCC TCAGGG TTTCTTTTTACCACT TERM 30 31812 - 31795 - g 70 -4.1 -4.72188 | GGAATGGAAAAGAAA GAGGCAT CGGA ATTCCTC TACGGCATGTTTCCC Paes_0028 31555 - 31890 + | sulfur relay protein, TusE/DsrC/DsvC family TERM 31 32070 - 32058 - g 70 -10.5 -2.74792 | opp_overlap 32056, overlap 32057 CGACGAGCTTGAAAG CGGCC CCT GGCCG AGCTTCGTATCCGGT TERM 32 32301 - 32252 - g 75 -4.9 -4.82128 | gap 1, opp_overlap 32252 32292, overlap 32253 32254 TGATCAAAGACAAAA TTCCTGAGGCGGCGGAATTTCACA CCA TGCGAA-TTCAGCCGGCTCCGGGC CTTCATTACAATACC TERM 33 32299 - 32254 - g 73 -11.9 -2.67831 | gap 1, opp_overlap 32252 32292, overlap 32253 32252 ATCAAAGACAAAATT CCTGAGGCGGCGGAATTTCACA CCA TGCGAA-TTCAGCCGGCTCCGG GCCTTCATTACAATA Paes_0029 31945 - 33198 + | sulfite reductase, dissimilatory-type alpha subunit Paes_0030 33271 - 34350 + | sulfite reductase, dissimilatory-type beta subunit Paes_0031 34374 - 36110 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Paes_0032 36155 - 36526 + | hypothetical protein Paes_0033 36539 - 36898 + | sulfur relay protein TusD/DsrE Paes_0034 36903 - 37280 + | sulfur relay protein TusC/DsrF Paes_0035 37323 - 37616 + | sulfur relay protein TusB/DsrH Paes_0036 37660 - 38106 + | hypothetical protein TERM 34 38229 - 38239 + G 70 -4.6 -4.52857 | overlap 38236 ACCGCGGCTGCGGTT CTCG TTG CGGG TTTTCTCTACCGGAT Paes_0037 38103 - 39098 + | Nitrate reductase gamma subunit TERM 35 39147 - 39125 - g 74 -2.8 -5.0133 | gap 1, overlap 39128 39132 TATCTGCCGAAAAAA TCAGAACTC GTTAAA GAGTTC-GA CGAAAAACCGAGCGT TERM 36 40561 - 40541 - g 79 -2.5 -5.28942 | CAGGTGAAAGAAAAA CACAAGG TCGATTC CCTGGTG ACGATCTGCGCAATC Paes_0038 39101 - 40750 + | DsrK protein Paes_0039 40740 - 41129 + | hypothetical protein TERM 37 41170 - 41159 - g 76 -3.6 -5.0133 | overlap 41160 GATTTTCTCAAAAAA GCCA GTCT CGGC GCACTTGCCGGGATC Paes_0040 41126 - 41902 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 38 42736 - 42766 + G 76 -11 -3.28912 | TCAGTATCTCTTTTT CGGGCTGGACGGCC ACG GGCAGTTCGTCCCG TTGATGTGGCTGTCG Paes_0041 41912 - 43063 + | Polysulphide reductase NrfD TERM 39 43596 - 43576 - g 91 -7.5 -5.11033 | overlap 43577 CAGAATGCGAAAAAA TCGGTTGCA TGG CGCAACCGG CTCAGGGAGATGGTG TERM 40 43595 - 43577 - g 81 -11 -3.65535 | overlap 43576 AGAATGCGAAAAAAT CGGTTGCA TGG CGCAACCG GCTCAGGGAGATGGT Paes_0042 43180 - 43629 + | porphyrin biosynthesis protein, putative TERM 41 43656 - 43702 + F 81 -11.7 -3.09933 | gap 2 CTCCCTGCTTTCCTG GCGTCCAGGAGTA--CCACAGCG GGT CGTTGTGGGATACTTCAGGGCGC TTCCCTCAATTAACG TERM 42 44027 - 44046 + G 70 -5 -4.57073 | opp_overlap 44032, overlap 44032 AACAGTCGTTCGTCT TAAAGGGG GAGA CCCGTTTA TTTTTGGCCGGGGTG Paes_0043 43731 - 45119 + | uroporphyrin-III C-methyltransferase TERM 43 45163 - 45198 + F 100 -11.2 -5.49729 | gap 1 CAGTCTCATCGTAAC GCCGCCACGAAAGGG CACACCT CCC-TTCATGGCGGC TTTTTTTCCCTCCTT Paes_0044 45492 - 46079 + | hypothetical protein TERM 44 46139 - 46166 + T 100 -14.3 -5.09762 | GATTGCGTTTCAGAG GCCGGGATTAT GTGATG ATAATCCCGGC TTTTTCTGTTCAGAT Paes_0045 49535 - 46212 - | Patatin TERM 45 47148 - 47162 + g 83 -10 -4.04415 | TGTCCCTGCAAGTTT GGAGAG CGT CTCTCC TTTCCTGTTCTTTCG Paes_0046 49764 - 51404 + | hypothetical protein TERM 46 51413 - 51447 + T 74 -10.8 -2.68823 | overlap 51412 CGATTGATAACGGTT ATTTTGCACCGGCG CTTCAGT TGCCGGTGCAAAAC CTTGTGTGCGGGCGA Paes_0047 51779 - 51474 - | ATP-dependent Clp protease adaptor protein ClpS Paes_0048 52805 - 51861 - | Muramoyltetrapeptide carboxypeptidase TERM 47 52544 - 52532 - G 70 -10.5 -2.72991 | CGATATCCTGAAGCA GGCGC GTT GCGCC CGATCCGCCTCTCAG TERM 48 52677 - 52687 + g 74 -2.4 -5.03314 | TCTTGCCGGTTTGAC GCGG TAG CCGA TTTTTTCAAGATAGA TERM 49 52867 - 52901 + r 100 -18.8 -3.86346 | opp_overlap 52867 TTCAAAATAAAAAAA CATCAGTGAATCGGTA TAA TCCCGATTCACTGATG TTTGTAAAAGCATGC TERM 50 52901 - 52867 - R 100 -18.8 -6.09196 | opp_overlap 52867 TTCAAAATAAAAAAA CATCAGTGAATCGGTA TAA TCCCGATTCACTGATG TTTGTAAAAGCATGC Paes_0049 53199 - 52933 - | H+transporting two-sector ATPase delta/epsilon subunit TERM 51 53024 - 52988 - G 90 -4.3 -5.44119 | opp_overlap 52963 CTGACTTCAAAAAAA CCGTCGGCAATGACAAA TGA TTTTTCGCCGCCGCCAG GGATGGAGACCCTGA Paes_0050 54603 - 53215 - | ATP synthase F1, beta subunit TERM 52 54654 - 54680 + H 71 -9.4 -3.0485 | overlap 54653 CAAAACTTTTTGCTG CGGACACCGGTT GTT ATCTGGTGTCTG ATTTCGATTTTTTTC Paes_0051 54943 - 55479 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 53 55502 - 55518 + F 77 -7.2 -4.41633 | TATATTTACCTCCTA GCGCCC TTTAC GGGTGC TTCTTTTTAACACTC TERM 54 55726 - 55751 + G 74 -6.2 -4.53303 | gap 1 GGGACCTTTATCAGG CTG-TCGGATG AAAAA CGTCCGAACAG TTTTCTCTGCCGGTC Paes_0052 55552 - 57420 + | Phosphoenolpyruvate carboxykinase (GTP) TERM 55 57448 - 57473 + F 100 -16.1 -6.06723 | opp_overlap 57435, overlap 57472 TAGCGCTTGTCAGAG CCGCGACCAGC ACCT GCCGGTCGCGG TTTTTTTTTAAAAAA TERM 56 57560 - 57589 + F 74 -6.6 -4.30014 | gap 2, opp_overlap 57566 ATAGTTCCCCCTGTT GACAC-AGGC-CAT CCCT ATGAGCCTTGTGTC TTTTGCCTTGATGGC Paes_0053 57704 - 59119 + | membrane protein involved in aromatic hydrocarbon degradation TERM 57 59211 - 59229 + T 76 -8 -4.25104 | opp_overlap 59212, overlap 59212 GAGCAGTATGTGAAA ACCCCGGT TTT GCCGGGGC TTTTCATGGAAGCAG TERM 58 59212 - 59228 + T 81 -11.5 -3.14848 | opp_overlap 59212, overlap 59211 AGCAGTATGTGAAAA CCCCGGT TTT GCCGGGG CTTTTCATGGAAGCA TERM 59 59228 - 59212 - T 88 -10.8 -4.15833 | opp_overlap 59212 59211 AGCAGTATGTGAAAA CCCCGG TTTTG CCGGGG CTTTTCATGGAAGCA Paes_0054 59466 - 59254 - | protein of unknown function DUF1458 TERM 60 59512 - 59498 - H 100 -11.4 -5.40072 | GTGCGTTGAAAAAAA CTCCGC CTT GCGGAG AGTGTACCATTATAT TERM 61 60072 - 60042 - g 74 -7.5 -4.14392 | CTGCAAGTCCGAAAA CCAGGTGCCGCTC GGCGT GAACCGTACCTGG GTGAAATATGTGGAA TERM 62 60102 - 60090 - g 76 -7.7 -4.15543 | GAAATATGTGGAAAA GGGAA AGT TTCCC GATACCCGCCGATAT TERM 63 60861 - 60881 + G 91 -7.5 -5.11063 | AGCCTTTCTGATTCG CGATCTGGA TCG TCCGGACCG TTTTTCTTCCGTCAT Paes_0055 59965 - 61512 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 64 61735 - 61769 + G 95 -15.9 -2.80622 | gap 1, overlap 61727 GAATATATGCTGGTG CCGACATCCTGCTTCA ATTG TGAGGCAGGATG-CGG TCTGCTCGCCTATAT Paes_0056 61525 - 64380 + | molydopterin dinucleotide-binding region Paes_0057 64454 - 65410 + | protein of unknown function DUF81 Paes_0058 65414 - 65833 + | hypothetical protein TERM 65 66078 - 66060 - g 93 -5.9 -5.27923 | opp_overlap 66072 GAAGCTCAGAAAAAA GTGGCGC TGATC GCGTCAC GCGGGACGCTTGACT Paes_0059 66039 - 66551 + | hypothetical protein Paes_0060 68776 - 66923 - | ATP-dependent DNA helicase RecQ TERM 66 67389 - 67401 + g 74 -7.7 -4.08945 | TTGTTCTTCTCTTTG CCTAC CCC GTAGG TTTTCAGGCGGTCGT Paes_0062 69351 - 70124 + | putative restriction endonuclease Paes_0063 70421 - 70714 + | hypothetical protein Paes_0064 70711 - 71028 + | transposase Paes_0065 71029 - 71301 + | transposase Paes_0067 71761 - 72810 + | FRG domain protein TERM 67 74115 - 74132 + F 81 -3.3 -5.37043 | overlap 74126 ATATGGATAGTTCTC GGTGCAT GAGT GTGCTCC TTTTTTCTGTAAGGT Paes_0069 74650 - 75186 + | hypothetical protein TERM 68 75750 - 75738 - g 91 -5.5 -5.37043 | ATTGCATATAAAAAA GCCTC TGT AAGGC CATATGTTAAGGAAA TERM 69 76262 - 76278 + G 70 -3.7 -4.62441 | opp_overlap 76265, overlap 76265 TTTGGCTTATTTTGA TAAGGTT GAG AACCTGA TTTCTTTATATGGCA TERM 70 76718 - 76707 - g 100 -3 -5.94713 | ACTGGAGAAAAAAAA CTTT TAAA AAAG GCTATGGATTTATGT Paes_0070 75189 - 76901 + | RelA/SpoT domain protein TERM 71 77859 - 77845 - T 80 -5.6 -5.0538 | GGTGATGGCAAAAAA GCGGGA TAT TACCGC GTAAGTCGAGCAAAG Paes_0073 79089 - 78529 - | transposase Paes_0074 79598 - 79125 - | transposase Paes_0075 80033 - 79824 - | RNA-directed DNA polymerase Paes_0077 80935 - 80534 - | hypothetical protein TERM 72 80934 - 80950 + g 85 -2.9 -5.40072 | overlap 80935 CTCCTGCGCGTTTTC ATCGGGA GAT TCCTGAC TTTTTTTGCAACCAA Paes_0078 81225 - 80932 - | transposase IS3/IS911 family protein Paes_0079 81630 - 81364 - | transposase IS3/IS911 family protein TERM 73 81645 - 81660 + r 79 -4 -5.24129 | TGCGTGTAAACTCCT TGGTTG TGTT TAACCA TTTTTTCTGCAACCA TERM 74 81924 - 81866 - R 100 -16.7 -2.85947 | gap 2, opp_overlap 81868 81869 81871 81889, overlap 81889 TCCAACAGAAGAGTA GTTGTTCTTATGCTTAAAAAAAACCGCAA TTA TTGCGGTTTTTTTTAAGCATAA-AATA-C TGTTTTATCTGCATA TERM 75 81868 - 81926 + r 100 -14.5 -4.56358 | gap 2, opp_overlap 81866 81889, overlap 81869 81871 81889 CAACAGAAGAGTAGT T-GT-TCTTATGCTTAAAAAAAACCGCAA TTA TTGCGGTTTTTTTTAAGCATAAAATACTG TTTTATCTGCATATA TERM 76 81869 - 81924 + r 100 -21.8 -3.88698 | gap 1, opp_overlap 81866 81889, overlap 81868 81871 81889 AACAGAAGAGTAGTT GT-TCTTATGCTTAAAAAAAACCGCAA TTA TTGCGGTTTTTTTTAAGCATAAAATAC TGTTTTATCTGCATA TERM 77 81871 - 81921 + r 100 -24.6 -3.00574 | opp_overlap 81866 81889, overlap 81869 81868 81889 CAGAAGAGTAGTTGT TCTTATGCTTAAAAAAAACCGCAA TTA TTGCGGTTTTTTTTAAGCATAAAA TACTGTTTTATCTGC TERM 78 81903 - 81889 - R 100 -10 -5.76949 | opp_overlap 81871 81869 81868 81889, overlap 81866 TATGCTTAAAAAAAA CCGCAA TTA TTGCGG TTTTTTTTAAGCATA TERM 79 81889 - 81903 + r 100 -10 -5.76949 | opp_overlap 81889 81866, overlap 81871 81869 81868 TATGCTTAAAAAAAA CCGCAA TTA TTGCGG TTTTTTTTAAGCATA Paes_0080 82173 - 81946 - | hypothetical protein Paes_0081 83596 - 82313 - | transposase IS116/IS110/IS902 family protein TERM 80 83235 - 83249 + g 70 -5.7 -4.40561 | TTATCCCAACGCCCA TCGAG CAGTT CTCGA TTCTTTTTGACCGCA TERM 81 83874 - 83840 - R 100 -17.4 -3.59315 | opp_overlap 83840 83844, overlap 83844 TCAATGAGTGTTAAA CAAAGAACCCGAAG ATTTTCG CTTCGGGTTCTTTG TTGCTTGGAAAGGCA TERM 82 83840 - 83874 + r 100 -17.4 -3.33696 | opp_overlap 83840 83844, overlap 83844 TCAATGAGTGTTAAA CAAAGAACCCGAAG ATTTTCG CTTCGGGTTCTTTG TTGCTTGGAAAGGCA TERM 83 83870 - 83844 - R 100 -12.4 -4.42806 | opp_overlap 83840 83844, overlap 83840 TGAGTGTTAAACAAA GAACCCGAAG ATTTTCG CTTCGGGTTC TTTGTTGCTTGGAAA TERM 84 83844 - 83870 + r 100 -12.4 -4.3255 | opp_overlap 83844 83840, overlap 83840 TGAGTGTTAAACAAA GAACCCGAAG ATTTTCG CTTCGGGTTC TTTGTTGCTTGGAAA Paes_0082 84545 - 83916 - | hypothetical protein TERM 85 83944 - 83960 + g 93 -5.8 -5.18357 | gap 1, overlap 83930 83944 83945 TCGGCAGGGATGTTG C-CGCCG TTTT CGGCGAG TTTTTTCATGACTTC Paes_0083 84645 - 85397 + | Methyltransferase type 11 Paes_0084 85416 - 85784 + | hypothetical protein Paes_0085 85860 - 85976 + | hypothetical protein TERM 86 86404 - 86393 - g 70 -3.6 -4.72029 | TTGAACTGAAGAAAA CCGC AGCA ACGG GAGTCGATGGGATAA Paes_0086 86113 - 87594 + | RNA-directed DNA polymerase (Reverse transcriptase) Paes_0087 87602 - 87883 + | hypothetical protein Paes_0088 88032 - 88496 + | putative transmembrane protein Paes_0089 88680 - 89018 + | alkylphosphonate utilization operon protein PhnA Paes_0090 89731 - 89027 - | DNA alkylation repair enzyme TERM 87 89950 - 89973 + G 90 -10.4 -4.37092 | gap 1, overlap 89953 GGCTTTTCCTGCATT TAGGAGCCGGA ATT TCCGGCTC-TA TTTTATCGGGCAGAT TERM 88 89953 - 89971 + G 100 -14.6 -3.79419 | overlap 89950 TTTTCCTGCATTTAG GAGCCGGA ATT TCCGGCTC TATTTTATCGGGCAG TERM 89 90087 - 90106 + G 91 -7.8 -5.03945 | overlap 90066 90090 GCGTGACGGCTGCAG CATCGTCG TTGC CGACGCTG TTTTTGTCGTTGTTC Paes_0091 89837 - 91165 + | major facilitator superfamily MFS_1 TERM 90 91545 - 91555 + G 77 -6.8 -4.57073 | TTGCAAGTTCGTGCG GCTG GCC CAGC TTTTTCGAGACGGTG Paes_0092 91301 - 91753 + | methionine-R-sulfoxide reductase TERM 91 91785 - 91758 - T 100 -9.1 -5.4505 | GCGGGCAATAAAAAA CCGGGTCTCTG ACGATG CAGGAACCCGG TTGACGCTGACTCAG TERM 92 91798 - 91810 + T 74 -5.5 -4.61873 | CGGTTGACGCTGACT CAGCG AGG TGCTG TTTTACTTTCTGAGG Paes_0093 92808 - 91813 - | hypothetical protein TERM 93 92132 - 92152 + g 100 -7.5 -5.86061 | overlap 92133 92136 TAGTGTTTGATGATC TGAAGCGCT TTA AGCGCCTCG TTTTTTTTGCTGCCG TERM 94 92133 - 92151 + g 77 -8.8 -4.10552 | overlap 92132 92136 AGTGTTTGATGATCT GAAGCGCT TTA AGCGCCTC GTTTTTTTTGCTGCC TERM 95 93210 - 93231 + G 71 -2.9 -4.85782 | GTTCGCCATGATCAT CACCCTTGT TGGT GCAGCGGTG TTTCTTTTTGCCGGA TERM 96 93427 - 93414 - g 71 -9.5 -3.47227 | CTTCAACCATCAGAA GGCGC AATC GCGCC GTTCGGCCCTGCAGG TERM 97 94815 - 94828 + G 70 -5.9 -4.21773 | CGTGACCTCGGAGTC CCGGC TGAA GTCGG TTGTTTCTCTTGGCG Paes_0094 92962 - 95259 + | NADH dehydrogenase (quinone) Paes_0095 95262 - 95681 + | Na+/H+ antiporter MnhB subunit-related protein Paes_0096 95678 - 96046 + | NADH-ubiquinone oxidoreductase chain 4L TERM 98 96705 - 96715 + G 93 -2.4 -5.66684 | CGGAGTCAAGGCTGC GCTG TTT CCGC TTTTTTTCTGGCTTC TERM 99 96755 - 96769 + G 75 -5.6 -4.59853 | opp_overlap 96746, overlap 96748 96757 ACCATACGCCGCCGG TCGCCG TGT CGGCTA TTTTTGCAGGCTTGC TERM 100 96757 - 96767 + G 74 -8.2 -3.91164 | opp_overlap 96746, overlap 96748 96755 CATACGCCGCCGGTC GCCG TGT CGGC TATTTTTGCAGGCTT TERM 101 97458 - 97476 + G 79 -2.4 -5.27779 | gap 1 TTTTACGGTGGTGTC CGGACTC TGGTTC GAG-CCG TTTTTTGATCTTGCA Paes_0097 96043 - 97560 + | NADH dehydrogenase (quinone) TERM 102 97686 - 97702 + G 72 -4.3 -4.59853 | opp_overlap 97697, overlap 97688 CTGTCGCGAGCTGTC TGGGGCG AAA CGCGCTA TTTTTCCAAAATTCC Paes_0098 97557 - 98030 + | cation antiporter Paes_0099 98027 - 98299 + | multiple resistance and pH regulation protein F Paes_0100 98296 - 98640 + | monovalent cation/proton antiporter, MnhG/PhaG subunit Paes_0101 99727 - 98669 - | phytase TERM 103 99792 - 99749 - R 71 -4.8 -4.4891 | opp_overlap 99754 99757, overlap 99757 TTGAGCATGATAAAA TATACAA-AGGGCTGAACGT GATGGA ACGTTCAGCCCTGCTGT-TG CGGGTAAGGGTTCTG TERM 104 99754 - 99787 + r 71 -9.6 -3.04144 | opp_overlap 99749 99757, overlap 99757 CATGATAAAATATAC AAAGGGCTGAACGT GATGGA ACGTTCAGCCCTGC TGTTGCGGGTAAGGG TERM 105 99784 - 99757 - R 100 -15.7 -4.36366 | opp_overlap 99757 99754, overlap 99749 GATAAAATATACAAA GGGCTGAACGT GATGGA ACGTTCAGCCC TGCTGTTGCGGGTAA TERM 106 99757 - 99784 + r 93 -15.7 -2.74523 | opp_overlap 99749 99757, overlap 99754 GATAAAATATACAAA GGGCTGAACGT GATGGA ACGTTCAGCCC TGCTGTTGCGGGTAA Paes_0102 102649 - 99809 - | TonB-dependent receptor TERM 107 100415 - 100433 + g 70 -3.9 -4.60487 | gap 1, opp_overlap 100428, overlap 100415 100416 ATCGCTCAGGTAGTG C-TCGATC ATGA GATCGACG TTTTTCGACATCGTC Paes_0103 102852 - 103325 + | hypothetical protein TERM 108 103351 - 103378 + T 74 -10.7 -2.71708 | gap 1, overlap 103350 TTCCCCTTCAGTTCA GGGTCGGT-AAC CTCTT GTTCACCGACCC GTTCTCTACCGTTTC Paes_0104 105353 - 103392 - | alpha amylase catalytic region Paes_0105 105571 - 106518 + | Cache type 2 domain protein TERM 109 106641 - 106657 + G 71 -3 -4.87665 | gap 1, overlap 106643 GCTGATGTTTGTCTC TG-TCGG GCTG CCGATCA TTTTTGTCAGTCAGA Paes_0106 106537 - 107889 + | Xanthine/uracil/vitamin C permease Paes_0107 109361 - 107904 - | cation transporter TERM 110 108532 - 108519 - G 81 -4.5 -5.05601 | CACGAGACAGAAAAA GAGGA CGAA TCCCC CATACCATCGAAATT TERM 111 109168 - 109158 - G 70 -6.8 -4.1337 | overlap 109142 CGAGACGATAAAGAA TCCG TCG CGGA TCGTCAGGTTGCGCT Paes_0108 110777 - 109389 - | TrkA-N domain protein TERM 112 110417 - 110430 + g 77 -3.1 -5.06816 | GGTGGATAACCAGAT CGATT TTGA AGTCG TTTTTGTTGAGCAAT TERM 113 110624 - 110649 + g 71 -9.1 -3.54741 | opp_overlap 110631, overlap 110608 110630 110647 CCATGGCGTTGCCGT CGATAATCTTG GCGT CAAGGTTGTCG TTTGCAGCGCTGATG TERM 114 110824 - 110811 - R 71 -3.8 -4.8236 | opp_overlap 110811 CACGGAAAAAAATAA CGGT CAGGAT ACCG TCTCTTCAATTAATA Paes_0109 111686 - 110895 - | hypothetical protein Paes_0110 111840 - 112442 + | NAD(P)H dehydrogenase (quinone) TERM 115 112530 - 112575 + G 84 -7.6 -4.69559 | gap 2, overlap 112572 AAAGAAGCTCGGGCT CGGTTCGGTGCTCGGCTACCTG ATTG CAGGT-GTCGTG-ATCGGGCCG TTTGTTTTCGGCTTT TERM 116 113971 - 113945 - g 79 -3.7 -5.03715 | opp_overlap 113947, overlap 113946 113947 ATGACCCTGAAAAAA CCGTTGCCATT GCCCG AACGGCAATGA AACATTTTCCCCACC Paes_0111 112444 - 114354 + | potassium efflux system protein Paes_0112 115487 - 114369 - | hydrolase, peptidase M42 family Paes_0113 117220 - 115484 - | GNAT-family acetyltransferase TIGR03103 TERM 117 115641 - 115669 + g 86 -12.5 -3.53091 | opp_overlap 115636 115662 115663, overlap 115638 ATAAAATCAAGCCCT GTTACCGGTATTC CCA GAATACCGGCAGC TTTGCAGGCCGCCAT TERM 118 117196 - 117208 + g 100 -5.5 -5.67967 | TCGGTACAAGATGCT CTTCG CTT CGGAG TTTTTTTGTCATAGT Paes_0114 118995 - 117217 - | asparagine synthase family amidotransferase TERM 119 119215 - 119225 + r 74 -4 -4.89521 | AATAGTCTTTTATGC GTTA TAT TAAC TTTTCTTTACAATGT Paes_0115 120495 - 119281 - | arsenite-activated ATPase ArsA Paes_0116 121166 - 120651 - | nitroreductase Paes_0117 122248 - 121211 - | TrkA-N domain protein Paes_0118 122906 - 122295 - | hypothetical protein Paes_0119 124157 - 123084 - | peptide chain release factor 1 TERM 120 123355 - 123380 + g 70 -9.7 -3.21099 | AGCATTTTCATGGCG CGCTCGCGGTT CTGG AGCTGTGAGCG TTCCTCCTGGCAGGC Paes_0120 125546 - 124185 - | membrane-associated zinc metalloprotease TERM 121 124572 - 124560 - G 70 -5.5 -4.4009 | opp_overlap 124566 124567, overlap 124561 TTCGATGCCATAAAA CGTCG CTT CGACA GGGTTGAGTTTTCTG TERM 122 125611 - 125573 - R 88 -11 -4.1891 | opp_overlap 125574, overlap 125574 125576 TTTCGCTAACATAAA CTATCCCGAATGCCGCTT TTT ATGCAGCGTTCGGGATAT TTCTCTCATATAACT TERM 123 125610 - 125574 - R 89 -14.5 -3.11024 | opp_overlap 125574, overlap 125573 125576 TTCGCTAACATAAAC TATCCCGAATGCCGCTT TTT ATGCAGCGTTCGGGATA TTTCTCTCATATAAC TERM 124 125574 - 125610 + r 100 -14.5 -4.11404 | opp_overlap 125574 125573 125576 TTCGCTAACATAAAC TATCCCGAATGCCGCTT TTT ATGCAGCGTTCGGGATA TTTCTCTCATATAAC TERM 125 125608 - 125576 - R 83 -12.7 -3.11182 | opp_overlap 125574, overlap 125574 125573 CGCTAACATAAACTA TCCCGAATGCCGCTT TTT ATGCAGCGTTCGGGA TATTTCTCTCATATA Paes_0121 126798 - 125650 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 126 127051 - 127079 + r 93 -9.6 -5.08824 | opp_overlap 127057, overlap 127057 ACCATAGAATGAAGA GTGAAACCGGCT TTTAC AGCCGGTTTTTC TTTTTTCCCTACCGG TERM 127 127073 - 127057 - R 79 -9.4 -3.78902 | opp_overlap 127051 127057 GAATGAAGAGTGAAA CCGGCT TTTAC AGCCGG TTTTTCTTTTTTCCC TERM 128 127057 - 127073 + r 100 -9.4 -5.75538 | opp_overlap 127057, overlap 127051 GAATGAAGAGTGAAA CCGGCT TTTAC AGCCGG TTTTTCTTTTTTCCC TERM 129 127088 - 127109 + r 85 -10.1 -4.19735 | overlap 127091 GTTTTTCTTTTTTCC CTACCGGCA GTCA TGCCGGTCG TTTACTTTTCAGGCG TERM 130 127091 - 127106 + r 73 -10.4 -3.10977 | overlap 127088 TTTCTTTTTTCCCTA CCGGCA GTCA TGCCGG TCGTTTACTTTTCAG Paes_0122 127393 - 127118 - | acylphosphatase Paes_0123 129506 - 127407 - | ATP-dependent metalloprotease FtsH TERM 131 128134 - 128145 + g 70 -5.8 -4.2679 | CCGGCTTCATGGTAG GCGA CAAT TCGC TTTTCCTGGGGGTTG Paes_0124 129847 - 130671 + | orotidine 5'-phosphate decarboxylase TERM 132 131080 - 131062 - g 82 -9.6 -4.18401 | opp_overlap 131053 131060 131062, overlap 131054 GCAGAGACGGTAAAA CCGCTATG ATC CATAACGG TATTATTGAGAACTA Paes_0125 130773 - 132617 + | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 133 132633 - 132654 + F 83 -12.3 -3.00774 | TTGTTGTGCGCAGCA CCACAGGGG CCGA TCCCTGTGG TCTCTCATTGCAGTG Paes_0126 132790 - 133728 + | domain of unknown function DUF1731 TERM 134 133760 - 133777 + T 72 -8.4 -3.68738 | TAGTGTGCCTGATCC TCCCGG GAAAGG CCGGGA TTCATTTCTTCAACG TERM 135 133845 - 133865 + T 74 -11.1 -2.63367 | opp_overlap 133845, overlap 133844 133847 TTCTGTAAAAAAAAA CAGCCCGGT TAT ACCGGACTG CTTGTCAGATTCTTC TERM 136 133865 - 133845 - T 100 -13.3 -6.06723 | opp_overlap 133845 133844 133847 TTCTGTAAAAAAAAA CAGCCCGGT TAT ACCGGACTG CTTGTCAGATTCTTC Paes_0127 134171 - 133899 - | RNP-1 like RNA-binding protein TERM 137 135524 - 135538 + G 76 -4.2 -4.98103 | overlap 135499 135523 GTGCAATTATTATCG GTGCTG TTG CATCAC TTTTCTGTTTTCTTG Paes_0128 134575 - 135900 + | ammonium transporter Paes_0129 135916 - 136257 + | nitrogen regulatory protein P-II TERM 138 136236 - 136267 + F 74 -10.8 -2.82193 | opp_overlap 136237 GATACGGACGAACGA ACGAGGCGGTTCAG CGAT CTGAACTGCCACGA TATCCTGAATCTGAT TERM 139 136266 - 136237 - f 85 -12.1 -3.41134 | opp_overlap 136236 ATACGGACGAACGAA CGAGGCGGTTCAG CGAT CTGAACTGCCACG ATATCCTGAATCTGA TERM 140 136290 - 136307 + F 100 -12.7 -6.20267 | opp_overlap 136287 AATCTGATATGATGA GGCGGCT TTAC AGCCGCC TTTTTTTCTTTTTCC Paes_0130 136439 - 137362 + | peptidase C1A papain TERM 141 137381 - 137405 + T 85 -13 -2.71364 | opp_overlap 137384 137392, overlap 137384 GCAGACCTGCTGCAG GAAGCGGTAA AGGGG TTACCGCTTC TGCTTCAGAACATGA TERM 142 137402 - 137384 - T 70 -8.9 -3.14344 | opp_overlap 137384 137381, overlap 137392 GACCTGCTGCAGGAA GCGGTAA AGGGG TTACCGC TTCTGCTTCAGAACA TERM 143 137384 - 137402 + T 73 -8.9 -3.50853 | opp_overlap 137384 137392, overlap 137381 GACCTGCTGCAGGAA GCGGTAA AGGGG TTACCGC TTCTGCTTCAGAACA Paes_0131 137974 - 137396 - | TPR repeat-containing protein TERM 144 137477 - 137497 + g 79 -2.5 -5.24531 | AAACTTCGCTGCATA GGTAAAATC CTT GATCTGACC TTTTTTGTCCCCGAT TERM 145 138137 - 138150 + H 71 -8.1 -3.86031 | AATGCCTGACGAATT GCCTG GTTG CAGGC TTCTTCCTTCGTTAA Paes_0132 138199 - 138927 + | chromosome segregation and condensation protein ScpA Paes_0133 139043 - 140314 + | hypothetical protein Paes_0134 140494 - 140934 + | protein of unknown function UPF0079 TERM 146 141492 - 141543 + G 100 -2 -5.78622 | overlap 141489 141493 141506 TCGGGCGGGAACTTG CCGGCCTTCGCCAATGCTGTGCCC GTTC GGGTGCGGCGGTTTCGAATGCTGA TTTTTTTTCGGCTGA Paes_0135 140978 - 141670 + | peptidase M22 glycoprotease Paes_0136 141774 - 142217 + | iojap-like protein TERM 147 142874 - 142864 - g 70 -6.8 -4.07885 | opp_overlap 142851 142864, overlap 142852 CATCCCTCCGCAAAA CCTC AAT GAGG TTGTCGGGGGCCTTA Paes_0137 142313 - 144793 + | DNA gyrase, A subunit Paes_0138 144854 - 145084 + | zinc finger CDGSH-type domain protein TERM 148 145824 - 145813 - g 81 -7.2 -4.65895 | TGCCGCAGTGAAAAA CCGC TTTC GCGG GAGATCAAGAACAAG Paes_0139 145153 - 146847 + | CTP synthase TERM 149 146881 - 146863 - f 73 -8.9 -3.56675 | GAACTGAACGAAAGA TGTGCAG TGTTG CTGCACA GTTGAAATGAGCGCC TERM 150 146893 - 146910 + F 100 -12.7 -5.35354 | opp_overlap 146892 146889 CACAGTTGAAATGAG CGCCCCT CTTC AGGGGCG TTTTTTCGTTGTATA TERM 151 147262 - 147284 + G 77 -3.3 -5.03715 | overlap 147265 GCCCGCTTGAAATGG CGGCCGACT GAAAA GGTCGGATG TTTTTTGACGGTACT Paes_0140 147073 - 147387 + | hypothetical protein TERM 152 147686 - 147671 - f 76 -10.4 -3.3197 | ACAGGACCGGGATAA CCCCGA GAAA TCGGGG ACAATACCGGATGAT TERM 153 149469 - 149496 + F 70 -9.4 -2.96933 | gap 1, opp_overlap 149477, overlap 149468 CAAAAGCATTTTAAC GTTATAAG-TCAC TTT GTGAACTTATAAC CTTTCCTGTTAATGT TERM 154 149501 - 149534 + F 74 -4 -4.90013 | gap 1 GAACTTATAACCTTT CCTGTTAATG-TGAG AGATA CTCATCAATAATAGG TTTTTGGTTAAGTTA TERM 155 152682 - 152701 + F 88 -10.7 -4.26189 | opp_overlap 152682 TTACTACACCATTAA GCCCGTC TTCATC GACGGGC TTTTGGCGTTTATAG TERM 156 152701 - 152682 - f 78 -10.7 -3.25719 | opp_overlap 152682 TTACTACACCATTAA GCCCGTC TTCATC GACGGGC TTTTGGCGTTTATAG Paes_0141 152829 - 153098 + | hypothetical protein TERM 157 153120 - 153162 + T 87 -14.3 -2.70932 | gap 2 ACTGGCAATTCGCTC TCTTGTCTTCCCGGACGACCT GAC AGGCCGTCCGGGA-G-CAAGG TGATTCAGGAGAGCA Paes_0142 154600 - 153167 - | Radical SAM domain protein TERM 158 154564 - 154547 - G 74 -7.7 -4.03234 | opp_overlap 154550, overlap 154548 154550 CGCGTTGTAGAGAAA CCAGCCA TTCC TGGCTGA CAGGAACAGCGTATT Paes_0143 154694 - 154849 + | hypothetical protein Paes_0144 156203 - 154863 - | Na+/H+ antiporter NhaA Paes_0145 156700 - 157407 + | PHP domain protein Paes_0147 158132 - 157746 - | DNA topoisomerase, type IA, zn finger domain protein TERM 159 158301 - 158324 + r 71 -9.4 -3.08046 | opp_overlap 158302, overlap 158300 CTGAGGAAAAAAAAA ACGCCCCCGG AATC CCGGAGGCGG CTTTTGCGATGCACG TERM 160 158323 - 158302 - R 100 -15.1 -6.41805 | opp_overlap 158301 158300 TGAGGAAAAAAAAAA CGCCCCCGG AATC CCGGAGGCG GCTTTTGCGATGCAC Paes_0148 160556 - 158358 - | catalase/peroxidase HPI TERM 161 158898 - 158909 + g 70 -7.2 -4.08692 | overlap 158871 GAAGGGCACGGTCAC GCCG GTAC CGGC TTTTCCGGCCGCTTC TERM 162 159060 - 159071 + g 70 -4.4 -4.56597 | TTGTTCCGGCTGGTT GACT TCCC AGTC TTTTTGCGGAGCGAG TERM 163 159530 - 159547 + g 75 -6.9 -4.30978 | CCTTCGGCTTCCACT GCCATGC GCCG GCAGGGC TTTTGGTCAGTTCCC TERM 164 160710 - 160724 + r 76 -2.8 -5.19275 | AAAATCTGCATCTAT CAAGAA TGA TTCCTG TTTTCTTTTCTGCAT Paes_0149 161128 - 160709 - | ferric uptake regulator, Fur family TERM 165 162268 - 162283 + G 76 -7.6 -4.2461 | overlap 162256 AGCGGCAGCAGCCGG CAAGGT GGCT ACCTTG TTTATTGGTAGCGAT Paes_0150 161342 - 162487 + | hypothetical protein TERM 166 162520 - 162551 + T 100 -17.5 -5.52023 | GCAGCTGATGCTTGA TGGGCATCGAATC AGGTAC GATTCGATGCCCA TTTTTTGTTGATCCT TERM 167 162558 - 162580 + T 70 -9.2 -3.16323 | CGATGCCCATTTTTT GTTGATCCTA GTG TGGGATCAGC TTGATGACGGGTTTT Paes_0151 163854 - 162565 - | hypothetical protein TERM 168 163285 - 163299 + g 82 -2.8 -5.23016 | overlap 163286 163296 AGCTGATTCGCGCGG TTCGAT GAT GTCGAG TTTTTTCGCTTCTTT Paes_0152 164016 - 164420 + | hypothetical protein Paes_0153 164431 - 165039 + | hypothetical protein TERM 169 165635 - 165657 + G 80 -11.3 -3.29381 | gap 1, opp_overlap 165610 165608 165607 CCTCAATGAGCGGGG GCGTCCGGAG ATAC CTCCGG-CGC TTGATCGTCTTATGG Paes_0154 165279 - 165677 + | thioesterase superfamily protein TERM 170 165704 - 165717 + F 100 -3.8 -5.64274 | GGGTAGATCGCTCTT CTGC GTTGAA GCAG TTTTTTTATCAATAG Paes_0155 165748 - 166275 + | hypothetical protein TERM 171 167189 - 167202 + G 76 -8.1 -4.19817 | ATCGGCAGAGATCGA TGCCC CAAA GGGCA TTTTCGCTGCATGAA Paes_0156 166280 - 167284 + | glycosyl transferase family 9 Paes_0157 167281 - 168057 + | exodeoxyribonuclease III Xth Paes_0158 168251 - 168658 + | ribosomal protein S6 Paes_0159 168722 - 169192 + | single-strand binding protein Paes_0160 169255 - 169491 + | ribosomal protein S18 Paes_0161 169540 - 169986 + | ribosomal protein L9 TERM 172 170033 - 170055 + F 100 -13.5 -5.69473 | ATTGCTCAATTGTAA CCGCATCAC AAGGC GTGATGCGG TTTTTTTATGATGTA TERM 173 170313 - 170326 + G 90 -8.1 -4.81083 | TGCGCATCCGGTGGT CGCCT ATAT AGGCG TTTTTGATCATTACG Paes_0162 170182 - 170574 + | hypothetical protein TERM 174 170649 - 170598 - T 100 -30.8 -3.06696 | opp_overlap 170614 170646, overlap 170614 TGTCTGTTCAAGATA TGCAGTAATAAAAAAAGCCTCATG ATCA CATGAGGCTTTTTTTATTACTGCA TGAACTGGTCAAGCA TERM 175 170633 - 170614 - T 100 -12.2 -5.84381 | opp_overlap 170614, overlap 170598 GCAGTAATAAAAAAA GCCTCATG ATCA CATGAGGC TTTTTTTATTACTGC TERM 176 170614 - 170633 + T 100 -12.2 -5.84381 | opp_overlap 170614 170598 GCAGTAATAAAAAAA GCCTCATG ATCA CATGAGGC TTTTTTTATTACTGC Paes_0163 171673 - 170642 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 177 171432 - 171467 + g 70 -6.2 -4.17762 | gap 1, opp_overlap 171432, overlap 171434 TTTTTTTCTGAAGCA G-CTGAGGATGCAAGAG TAT CTTTGGCATCCTCATAC TTCTTTTCAGCGGTG TERM 178 171434 - 171464 + g 83 -13.4 -3.10579 | opp_overlap 171432, overlap 171432 TTTTTCTGAAGCAGC TGAGGATGCAAGAG TAT CTTTGGCATCCTCA TACTTCTTTTCAGCG Paes_0164 172044 - 171697 - | ribosomal protein L20 Paes_0165 172269 - 172075 - | ribosomal protein L35 Paes_0166 172894 - 172301 - | translation initiation factor IF-3 TERM 179 172341 - 172353 + g 95 -6.3 -5.35224 | overlap 172337 172343 TTTGCTAACTGTCTT TCGAA GAT TTCGA TTTTCTTTTTATCGG TERM 180 172764 - 172776 + g 72 -6.9 -4.17491 | overlap 172774 TGTTCAGCCATTTTT CTGGC TTC GCCGG TTTTCAGGATTTCCT TERM 181 172870 - 172883 + g 85 -3.1 -5.34555 | TTAGTTTTGGCTTTT GAGGA GCGC TTCTC TTTTTTCTCATATGG Paes_0167 174919 - 172946 - | threonyl-tRNA synthetase TERM 182 173100 - 173112 + g 100 -4.8 -5.54264 | GGGATTTTTGCGACT TCCG ATTCG CGGA TTTTTTTCCCTATTT TERM 183 174154 - 174166 + g 100 -5.5 -5.71638 | overlap 174155 GTTCAGCGCCGAGCT TGCGA TGA TCGCG TTTTTTTGCTTCTTC TERM 184 174155 - 174165 + g 70 -6.8 -4.00543 | overlap 174154 TTCAGCGCCGAGCTT GCGA TGA TCGC GTTTTTTTGCTTCTT TERM 185 174948 - 174969 + r 100 -12.3 -3.91434 | TCTTCTAGATCTTGG CAGGTACCC TATC GGGTGCCTG TTTATACCCTGATTT Paes_0168 176643 - 175234 - | chlorophyllide reductase subunit Z TERM 186 176435 - 176445 + g 74 -3.2 -4.9725 | overlap 176427 TGGGTGCTTCCAGAC GAGG AAA TCTC TTTTTCTGTCAGGCT Paes_0169 178460 - 176739 - | glycoside hydrolase family 3 domain protein TERM 187 177208 - 177222 + g 70 -3.5 -4.59982 | overlap 177209 177212 TTCTTTTTTCGGCCT TCTGC GAGAG GCAGG TTTCTTTCGTTATCG TERM 188 177385 - 177397 + g 100 -6.3 -5.55664 | AGGATGCGTCGGACG GAATC GTT GATTC TTTTTTTGCTGATCC TERM 189 177869 - 177880 + g 81 -4.4 -5.06103 | overlap 177851 CGATAAAGGCGTTTG CCAT GGAG ATGG TTTTTTCGACGTTGT TERM 190 178071 - 178100 + g 81 -7.1 -4.70659 | gap 1 GCTCGGAGCAAATTC GGTTGCGCCAT-CG ATA CGCATGGCGAGGCC TTTTTCCATGTCGGC Paes_0170 179014 - 178499 - | HNH endonuclease TERM 191 178770 - 178781 + g 79 -2.2 -5.31275 | CACTGAAAGTTGTCG CGTC TGAA GATG TTTTTTCTGCTGAGC TERM 192 179123 - 179176 + r 71 -10.3 -2.71144 | TTGTTCTGAGTCCTG AGTCCTGAGTGCTGAGTGCTGAGAT TTTT AACTCAGCACTTCGAACTCAGCACG TCCTTCAGCAGCCTG Paes_0171 180644 - 179181 - | Glycine dehydrogenase (decarboxylating) Paes_0172 181582 - 180749 - | Ribonuclease III Paes_0173 182851 - 181607 - | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 193 182593 - 182575 - G 89 -13.2 -3.3382 | TCGATGATACATCAA GCCCTGAA TCT TTCAGGGC CTGGTCGGAAGCGGC Paes_0174 183146 - 182904 - | acyl carrier protein Paes_0175 183991 - 183248 - | 3-oxoacyl-(acyl-carrier-protein) reductase Paes_0176 184942 - 184028 - | malonyl CoA-acyl carrier protein transacylase Paes_0177 185966 - 184980 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 194 185879 - 185893 + g 77 -2.8 -5.03715 | overlap 185881 TGCGTATCCATTCAT CACTTG TAT CAAGTA TTTTTTCCAGGTCCT Paes_0178 187117 - 186092 - | fatty acid/phospholipid synthesis protein PlsX TERM 195 186482 - 186494 + g 71 -3.4 -4.80882 | TTCGATGTTGCCGAT GAAG TTGAT CTTC TTTTTGCTGTCGGCT TERM 196 186532 - 186550 + g 76 -3.8 -4.96427 | overlap 186510 186509 186534 GCTGCTTGTAGGTCT GCTTCAGG AGT TCTGAACC TTTGTTTTCTTCTTC Paes_0179 187332 - 187141 - | ribosomal protein L32 Paes_0180 187894 - 187364 - | protein of unknown function DUF177 TERM 197 188246 - 188232 - H 71 -4.3 -4.7254 | ATCTGGCACTAAAAA GGAAT TTTAT ATTCC GCGATAGCTCAATGG TERM 198 188326 - 188350 + H 100 -5 -5.7946 | opp_overlap 188326 CGGAGCGAAAAAAAA GGAAGTACCT GTAAA AAGTGCTTCC TTTTTTTGTTGCACG TERM 199 188350 - 188326 - H 100 -5 -5.81412 | opp_overlap 188326 CGGAGCGAAAAAAAA GGAAGTACCT GTAAA AAGTGCTTCC TTTTTTTGTTGCACG Paes_0181 188428 - 188679 + | excinuclease ABC, C subunit domain protein TERM 200 188741 - 188764 + F 100 -6 -5.72616 | opp_overlap 188741 188746 TGGAGCCAAAGAGAA GCAGACGT AGAAAAAA GCGTCTGC TTTTTTTATGTAGAT TERM 201 189452 - 189468 + G 70 -3.7 -4.59773 | CGAATGCCTTACAGG CAAGACA TTT TCTCTTG TTTTTGAGCGTCCGG TERM 202 189952 - 189934 - g 76 -3.8 -5.00616 | CGGCGCTCGAAAAAA CTGCTTCC TGG AGAATCAG AGGCAATATTCTCGA Paes_0182 188928 - 190025 + | protein of unknown function DUF306 Meta and HslJ TERM 203 190262 - 190288 + F 100 -11.5 -5.55769 | opp_overlap 190251 190262 TAAAGGCATTCTAAA GCCACCTGCCC CGCAA GGGTCGGTGGC TTTTTTGTTATAAGC TERM 204 190288 - 190262 - f 78 -10.1 -3.62864 | gap 1, opp_overlap 190262, overlap 190251 TAAAGGCATTCTAAA GCCACCTGCCCC GCAA GGGTC-GGTGGC TTTTTTGTTATAAGC TERM 205 191417 - 191430 + G 70 -3.8 -4.72272 | opp_overlap 191425 TATCTGCCGATTGAC CCGA AGGATG TCGG TTTTTCCTACAAGGC TERM 206 191507 - 191541 + G 75 -7.1 -4.30416 | opp_overlap 191506, overlap 191509 191522 191536 GTGATGGAAAAGGAG TTCGGCTACAGTCTT CCAAA ATGGCTGCAGCCGGA TTTTGGCTTGGTGGT TERM 207 191711 - 191701 - g 70 -6.8 -4.04206 | GGATCCTGATAGAAA CGAC GAG GTCG CTACAACGATCACAA Paes_0183 190322 - 192019 + | 2-isopropylmalate synthase TERM 208 192066 - 192016 - f 91 -7.9 -5.28481 | opp_overlap 192031, overlap 192031 TACTCAAGCAAAAAA GTAAATCT-TAAAAAACCCTGCGCC AAA AGCGCAGGGTTTTTTTGAAACTT-C AACAAATCAATAACT TERM 209 192051 - 192031 - f 100 -14.7 -5.12707 | opp_overlap 192031, overlap 192016 GTAAATCTTAAAAAA CCCTGCGCC AAA AGCGCAGGG TTTTTTTGAAACTTC TERM 210 192031 - 192051 + F 100 -14 -5.43866 | opp_overlap 192031 192016 GTAAATCTTAAAAAA CCCTGCGC CAAAA GCGCAGGG TTTTTTTGAAACTTC TERM 211 192302 - 192318 + G 76 -7.9 -4.1585 | opp_overlap 192301, overlap 192316 TAATCTCGACGCAAT GGCTGCC TGC GGCATCC TTTTCAGGATTGTCA Paes_0184 192120 - 192551 + | ferric uptake regulator, Fur family Paes_0185 192548 - 193471 + | periplasmic solute binding protein Paes_0186 193468 - 194223 + | ABC transporter related TERM 212 194980 - 194991 + G 74 -2.2 -5.16841 | CTTCGATTATCCTGA TTGC GGCA GCAG TTTTTCTTGCTGTGC Paes_0187 194229 - 195038 + | ABC-3 protein TERM 213 195041 - 195056 + F 70 -9 -3.25481 | CGGATCTCGTTGAGT GCAACC GACA GGTTGC TGTTGTGGGGTGTTT Paes_0188 195141 - 196478 + | hypothetical protein Paes_0189 197489 - 196485 - | Na+/Ca+ antiporter, CaCA family Paes_0190 197601 - 197831 + | hypothetical protein Paes_0191 197890 - 198276 + | CrcB protein Paes_0192 198339 - 198686 + | protein of unknown function DUF190 TERM 214 198719 - 198692 - T 100 -17.8 -5.63504 | opp_overlap 198687 198715 AACGGCATAAAAAAA GCGGGAAACGCC ATAA GACGTTTCCCGC TCCGGATGTTTCTGT TERM 215 198719 - 198755 + T 71 -5.2 -4.50058 | overlap 198687 198715 198721 ATAAGACGTTTCCCG CTCCGGATGTTTCT GTTTCCCTG AGGAATATCCGGTG TTTTACTTCTGGGTA Paes_0193 200053 - 198758 - | glutamate-1-semialdehyde-2,1-aminomutase Paes_0194 201043 - 200249 - | DNA repair protein RecO Paes_0195 201182 - 201427 + | regulatory protein, FmdB family TERM 216 201465 - 201484 + T 76 -5.7 -4.74504 | opp_overlap 201455 201465 ATAGATTGACAAAAA GCCTTCT TTTCAT GGAAGGC TTTTTGCATTGCGCT TERM 217 201484 - 201465 - T 77 -5 -4.90455 | opp_overlap 201465, overlap 201455 ATAGATTGACAAAAA GCCTTC TTTTCATG GAAGGC TTTTTGCATTGCGCT Paes_0196 202428 - 201511 - | hypothetical protein TERM 218 202621 - 202639 + G 70 -5.9 -4.254 | ATCGCCGGAGCAACC GGCCCTC ATGAA GAGGACC TTTCTTCACTGTTCG Paes_0197 202462 - 203598 + | UDP-N-acetylglucosamine 2-epimerase TERM 219 203662 - 203685 + F 90 -10.9 -4.371 | overlap 203663 TTTTCATTTCCCGTA GGGGCGGGC CCCTGT GCCCGCCCG TTTTCGTGTCATCAG TERM 220 203663 - 203684 + F 95 -14.4 -3.21778 | overlap 203662 TTTCATTTCCCGTAG GGGCGGGC CCCTGT GCCCGCCC GTTTTCGTGTCATCA Paes_0198 203714 - 204385 + | hypothetical protein Paes_0199 204485 - 205486 + | Radical SAM domain protein TERM 221 205500 - 205518 + F 70 -7.4 -3.86194 | opp_overlap 205500 AGAGAAACGAGAAAA CTGTGCGT TCG ACGCAGAG TTTGTCGGGCCGCTT TERM 222 205518 - 205500 - f 82 -7.4 -4.6575 | opp_overlap 205500 AGAGAAACGAGAAAA CTGTGCGT TCG ACGCAGAG TTTGTCGGGCCGCTT TERM 223 205649 - 205676 + F 86 -9.9 -4.30719 | gap 1 GTTTCCCGACTTCCG TACGGGCGG-CC ACAGG GGACCGCCTGTA TTTGTTCTACGGAAA Paes_0200 206279 - 210085 + | hypothetical protein TERM 224 210504 - 210526 + G 84 -7.7 -4.61566 | overlap 210524 AAGACGATCTGGGTA CCCTTCTTG TGACC CAGGAGGGG TTTTATCCTTTGCGC Paes_0201 210233 - 211210 + | peptidase C14 caspase catalytic subunit p20 Paes_0203 211869 - 212300 + | OsmC family protein TERM 225 212372 - 212382 + F 80 -4.6 -5.22312 | opp_overlap 212372 TTATATTGTATTAAT GGCG TAA CGTC TTTTTTCCTATCAGT TERM 226 212933 - 212904 - g 70 -4.9 -4.4715 | GCGCAACCTATAAAA CCATACAGATCGG TAAG CAGGTCTGGATGG CGGAAAATCTTGATG Paes_0204 212411 - 213493 + | TIR protein Paes_0205 213528 - 213770 + | hypothetical protein TERM 227 214037 - 214064 + T 71 -9.2 -3.34517 | gap 1, overlap 214035 TTCTCTCTCCAGAGG CGTCACC-GAAGA CTG TCTTCAGGAGACG TATTTCGACAAGCGT Paes_0207 215051 - 214194 - | Peptidase M23 TERM 228 215060 - 215072 + r 70 -5.5 -4.3586 | overlap 215054 GTCTCATAGTGCTCT GTTGC TGT GCAGC TTTTAGTGTGGCTGC Paes_0208 215887 - 215075 - | metallophosphoesterase TERM 229 215733 - 215757 + g 81 -13 -2.66118 | opp_overlap 215731, overlap 215731 215729 215728 GGCCCTTCAACGAGG TCACCCATCT GGATG AGATGGGTGA TGCCTTCGTTTTCCA Paes_0209 217041 - 215896 - | peptide chain release factor 2 TERM 230 217737 - 217724 - g 70 -4.5 -4.58395 | gap 1, overlap 217725 217726 CTTATTGTGGAAAAA GCG-GC ATC GCGCGC ATCGGGCCGGGATGC Paes_0210 217286 - 219316 + | alpha amylase catalytic region TERM 231 222542 - 222567 + G 72 -7.7 -3.97636 | gap 1, overlap 222517 GCAGCATCTGCTTCT TCGCGCTTATCT TAT GGATAAG-GCGA TTTATGAGTTGAACT Paes_0211 219336 - 222653 + | trehalose synthase TERM 232 222925 - 222954 + G 70 -7.1 -4.03093 | GTGTCCCTTTTTCTT GGCGATGTTCTCG AAAG CGAGGTCATTGTC TTTATCCTCGTTGTC TERM 233 224520 - 224500 - g 81 -9.7 -3.9712 | opp_overlap 224481 GCATTTCAGGAGAAA GGTCATGTC GTT GCCATGACC GGTGATGGCGTCAAC TERM 234 224685 - 224701 + G 79 -3.7 -5.06089 | CAGGGCGATTTTCGA CAATCTT CGC AAGTTTG TTTTCTTTCTGCTTT Paes_0212 222706 - 225345 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 235 225710 - 225676 - g 74 -9.9 -3.53012 | gap 1 TGGCCGTGGTGGAAA GCCGGGCGCAAGCTGG ATGA CCAGC-CGCGACAGGC AACGGCGTATCGATG Paes_0213 225461 - 226105 + | phospholipase/Carboxylesterase Paes_0214 227821 - 226106 - | hypothetical protein TERM 236 226446 - 226470 + g 84 -7.8 -4.62471 | AGCCTCAGCCATTTG CTGCCGTCAG AACCG TTGTCGGCAG TTTTTCGGACTTCGG TERM 237 226669 - 226658 - G 83 -5.8 -4.88405 | opp_overlap 226657 226660, overlap 226659 226660 AAGTCCGAAAGAAAA TGCC TGCT GGCA GGTTTTGCCGCAGCC TERM 238 227244 - 227260 + g 86 -3.7 -5.40072 | overlap 227242 TTCGTGAGTATCTTC TCTTTCT GGA AGAGGGA TTTTTTTGCCGAAGA Paes_0215 228724 - 227903 - | MazG family protein TERM 239 228109 - 228129 + g 71 -2.5 -4.92239 | overlap 228092 228089 228088 228123 GCAGGTCGCCGAACT CCTCTTC CTGTTCT GCAGAGG TTTTTGCGTTTTTGA TERM 240 228270 - 228290 + g 91 -5.4 -5.40474 | gap 1, opp_overlap 228270 ATGGCTTTCGGAACA CCGTC-GAG CAGG CTCCGGCGG TTTTTTTCAAGGAGT Paes_0216 228836 - 229507 + | short-chain dehydrogenase/reductase SDR Paes_0217 229517 - 230947 + | tRNA modification GTPase TrmE Paes_0218 230964 - 231347 + | holo-acyl-carrier-protein synthase Paes_0219 231426 - 231620 + | hypothetical protein TERM 241 231653 - 231671 + T 100 -14.6 -4.46757 | opp_overlap 231653 GATGCAATGCAAAAA GCCCGCTT CAT AAGCGGGC TTTTGTGGCTCTGTT TERM 242 231671 - 231653 - T 100 -14.6 -4.75174 | opp_overlap 231653 GATGCAATGCAAAAA GCCCGCTT CAT AAGCGGGC TTTTGTGGCTCTGTT Paes_0220 232193 - 231702 - | rare lipoprotein A Paes_0221 232446 - 232586 + | hypothetical protein Paes_0222 232597 - 233784 + | arsenite-activated ATPase ArsA Paes_0223 233928 - 234212 + | hypothetical protein TERM 243 234221 - 234267 + T 93 -14 -3.24827 | opp_overlap 234235, overlap 234222 234235 TGATTGAATCAGTGA TCAGTATAAAAAAAGGAGGCTT TAA AAGCCTCCTTTTTTTATACCCC TTCGTGCATTCTGTT TERM 244 234222 - 234266 + T 100 -17.5 -2.54173 | opp_overlap 234235, overlap 234221 234235 GATTGAATCAGTGAT CAGTATAAAAAAAGGAGGCTT TAA AAGCCTCCTTTTTTTATACCC CTTCGTGCATTCTGT TERM 245 234235 - 234253 + T 100 -13.2 -5.61596 | opp_overlap 234235, overlap 234222 234221 ATCAGTATAAAAAAA GGAGGCTT TAA AAGCCTCC TTTTTTTATACCCCT TERM 246 234253 - 234235 - T 100 -13.2 -5.67967 | opp_overlap 234235 234222 234221 ATCAGTATAAAAAAA GGAGGCTT TAA AAGCCTCC TTTTTTTATACCCCT Paes_0224 234510 - 234259 - | hypothetical protein Paes_0225 235891 - 234548 - | pentapeptide repeat protein Paes_0226 236794 - 235973 - | protein of unknown function DUF6 transmembrane Paes_0227 236979 - 237677 + | NmrA family protein TERM 247 237755 - 237733 - T 100 -17.8 -3.42996 | opp_overlap 237733 237737, overlap 237737 GACTATGCATGATAA CAAAGCGCGG CGC CCGCGCTTTG TGTTCAGTAGATCGG TERM 248 237733 - 237755 + T 100 -17.8 -3.09878 | opp_overlap 237733 237737, overlap 237737 GACTATGCATGATAA CAAAGCGCGG CGC CCGCGCTTTG TGTTCAGTAGATCGG TERM 249 237751 - 237737 - T 100 -12.8 -4.35885 | opp_overlap 237733 237737, overlap 237733 ATGCATGATAACAAA GCGCGG CGC CCGCGC TTTGTGTTCAGTAGA TERM 250 237737 - 237751 + T 100 -12.8 -4.21607 | opp_overlap 237737 237733, overlap 237733 ATGCATGATAACAAA GCGCGG CGC CCGCGC TTTGTGTTCAGTAGA Paes_0228 240767 - 237759 - | Methyltransferase type 11 TERM 251 238219 - 238249 + g 82 -9.1 -4.27467 | overlap 238201 GTGGCCGGGTGGCTG CGGATATGCTCGA AGAGC TTGAGCATATCGG TTTCTTCAGTTGTCA TERM 252 239672 - 239686 + g 76 -4.2 -4.91511 | overlap 239674 GAAGAGGAGAGGAGT CGTCGA CGA TCGAGG TTTTTCTGATACGCT Paes_0229 241506 - 240859 - | hypothetical protein TERM 253 240987 - 240997 + g 70 -4.6 -4.48175 | opp_overlap 240983 CGATATCAAGACCTG CTGC AAG GCGG TTTTCATTGAATTTT TERM 254 241162 - 241173 + g 79 -2.2 -5.28176 | CAGTGTTATGTAAGC CGGT TTCG ATCG TTTTTTGTAGATGAC TERM 255 241640 - 241607 - R 100 -17 -5.0916 | opp_overlap 241615, overlap 241615 TTTTTAATATAAAAA CACAAAAAGCCTTC AGAAAA GAAGGCTTTTTGTG TGAAGATGCGTTTTT TERM 256 241632 - 241615 - R 91 -7 -5.38398 | opp_overlap 241615, overlap 241607 ATAAAAACACAAAAA GCCTTC AGAAAA GAAGGC TTTTTGTGTGAAGAT TERM 257 241615 - 241632 + r 82 -7 -4.9725 | opp_overlap 241615 241607 ATAAAAACACAAAAA GCCTTC AGAAAA GAAGGC TTTTTGTGTGAAGAT Paes_0230 242051 - 241656 - | chlorosome envelope protein D TERM 258 242166 - 242191 + r 74 -7.5 -4.19258 | opp_overlap 242170, overlap 242170 TTGATATGCAGAATG AAAACGGGACG ATGC CGTCCCGTTGC TTTTGACTGGAGTGT TERM 259 242170 - 242187 + r 95 -12.7 -3.69605 | opp_overlap 242170, overlap 242166 TATGCAGAATGAAAA CGGGACG ATGC CGTCCCG TTGCTTTTGACTGGA TERM 260 242187 - 242170 - R 100 -12.7 -4.50058 | opp_overlap 242170 242166 TATGCAGAATGAAAA CGGGACG ATGC CGTCCCG TTGCTTTTGACTGGA Paes_0231 242466 - 242215 - | bacteriochlorophyll C binding protein Paes_0232 243978 - 242575 - | Na+/solute symporter Paes_0233 245151 - 243991 - | hypothetical protein TERM 261 244349 - 244359 + g 77 -3.2 -5.06451 | overlap 244341 CCTTCCAGCTCGAGT TCGT CAA GCGA TTTTTTCAGGTCATA Paes_0234 246107 - 245148 - | Nucleotidyl transferase TERM 262 245409 - 245421 + g 77 -3.4 -5.10064 | ACGGTTGCCAAGCTC CAGA ACCGG TCTG TTTTTGTGTGTTGAG Paes_0235 247105 - 246104 - | aminoglycoside phosphotransferase TERM 263 246721 - 246695 - G 73 -11.7 -2.71731 | gap 1, opp_overlap 246695, overlap 246697 TTCACGGTCGAACGA GAGGGTGAATGC AATG GCAT-CACCCTC TTTTTCAATACGTTG TERM 264 246695 - 246721 + g 100 -11.7 -4.68424 | gap 1, opp_overlap 246695 246697 TTCACGGTCGAACGA GAGGGTGAATGC AATG GCAT-CACCCTC TTTTTCAATACGTTG TERM 265 247148 - 247122 - R 100 -11.7 -6.35605 | opp_overlap 247121 247122 GAATACAAAAAAAAA GCACCCTATGT GCAGA ACATAAGGTGC CTTCTGAAAAAAGAC TERM 266 247171 - 247161 - R 75 -4.6 -5.00616 | opp_overlap 247161 TGCCTTCTGAAAAAA GACG TTT CGCC TTATTTGTTGTCGCC Paes_0236 247402 - 247172 - | chlorosome envelope protein B Paes_0237 247729 - 247613 - | hypothetical protein Paes_0238 248007 - 247756 - | hypothetical protein Paes_0239 248175 - 248798 + | hypothetical protein TERM 267 248893 - 248915 + F 100 -7 -6.19302 | CTTTTTGTGTTTGTA GAGGCATGTC TTT GATGTGCTTC TTTTTTTTGTTATGT Paes_0240 249018 - 249248 + | protein of unknown function DUF156 Paes_0241 249293 - 250465 + | hypothetical protein TERM 268 251188 - 251212 + G 71 -2.2 -4.88163 | gap 1, opp_overlap 251192, overlap 251190 ATGATGATTCAGGAT GAG-ATCAGAA CCGC TTCTGATGCAC TTTGTTTTCTGTTGC Paes_0242 250510 - 251844 + | outer membrane efflux protein Paes_0243 251890 - 252270 + | hypothetical protein Paes_0244 252291 - 255500 + | acriflavin resistance protein Paes_0245 255519 - 255824 + | hypothetical protein Paes_0246 255827 - 256468 + | beta-lactamase domain protein Paes_0247 256708 - 257154 + | putative signal-transduction protein with CBS domains TERM 269 257237 - 257211 - f 81 -6.5 -4.99035 | TGATTCATAGAAAAA CGGGTCTGC CTCTGTATT GCAGGCCCG CTTAACACCGGGAAC Paes_0248 257290 - 258993 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Paes_0249 259012 - 260034 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein Paes_0250 260052 - 260900 + | CoB--CoM heterodisulfide reductase TERM 270 261013 - 260990 - f 72 -3.2 -5.00616 | opp_overlap 260990 CCTGTTTTTAAAAAA GTGCAAAA AAGCGTAG CTTTGCAC TTTCATATTGTGCTC TERM 271 261484 - 261511 + G 76 -7.8 -4.15565 | gap 1, opp_overlap 261484 261482 261478, overlap 261486 TCTGACCAAGAAAGA GCTCGATAACAGG GTT CCTCTTATCG-GC TTTTCCGGTGCTGCA TERM 272 262002 - 261992 - g 78 -8.2 -4.28487 | CATGATAAAATCAAA GCGG AAG CCGC TAAAATTCTCAAGCA Paes_0251 261092 - 262147 + | uroporphyrinogen decarboxylase TERM 273 262181 - 262206 + F 100 -17.7 -6.06529 | opp_overlap 262181, overlap 262171 TTTTTTGCTGCAAAA CGCCGCATCAT GTTT ATGATGCGGCG TTTTTTTTATATGTC TERM 274 262206 - 262181 - f 100 -17.7 -4.07568 | opp_overlap 262171 262181 TTTTTTGCTGCAAAA CGCCGCATCAT GTTT ATGATGCGGCG TTTTTTTTATATGTC Paes_0252 262190 - 262372 + | hypothetical protein TERM 275 262942 - 262960 + GT 77 -6.6 -4.49311 | overlap 262943 ATCCGCAGACCATTG TCGGCAGG GCG CTTGCCGC TTTTCTGATGATCAT TERM 276 262943 - 262959 + GT 76 -10.1 -3.28864 | overlap 262942 TCCGCAGACCATTGT CGGCAGG GCG CTTGCCG CTTTTCTGATGATCA Paes_0253 262323 - 263144 + | Ion transport protein Paes_0254 264019 - 263153 - | UspA domain protein Paes_0255 264070 - 264234 + | hypothetical protein Paes_0256 264203 - 264844 + | phosphoheptose isomerase Paes_0257 264851 - 265318 + | 6,7-dimethyl-8-ribityllumazine synthase Paes_0258 268532 - 265410 - | multi-sensor hybrid histidine kinase TERM 277 265875 - 265899 + g 75 -4.4 -4.7657 | gap 1, overlap 265878 TGCTTCAGGCTCTTG TGTCGCTGATA GTGC TATCAG-GGCA TTTTTGAGCTTTTTA TERM 278 265939 - 265952 + g 72 -5.2 -4.57569 | opp_overlap 265938 265947 265948 GGTTTTTGTAACCAT GCCG AAAAGC CGGC TTTTTCAGCCAGTGA TERM 279 266221 - 266243 + g 77 -7.1 -4.56597 | gap 1, opp_overlap 266241 ATTTCACGGTTGGTA GCG-TTATCG TCTA CGATAAGCGC TTTTTGACCGAAGAG TERM 280 267953 - 267967 + g 70 -5.6 -4.4281 | overlap 267955 267962 TGCTTAGAATGGAGT CACTGC GTT GCAGGG TTTGTTCTGCTTTGA TERM 281 268319 - 268331 + g 71 -3.4 -4.7339 | CTTTTTGCCAGTCTA TGTC GTCAG GACA TTTTTCCGGTTTGTT Paes_0259 269406 - 268696 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 282 269445 - 269496 + r 76 -10.3 -3.314 | gap 1, opp_overlap 269441 269453 269455, overlap 269443 269453 AAAGTCAATAAGGGG TGG-AGACAGACTCTCACCGCTTG GCCTG CAACTGGTGAGGGTCTGTTGGCCA TGTTGATTACTTGTT TERM 283 269453 - 269487 + r 79 -11.5 -3.06315 | opp_overlap 269441 269453 269455, overlap 269445 269443 TAAGGGGTGGAGACA GACTCTCACCGCTTG GCCTG CAACTGGTGAGGGTC TGTTGGCCATGTTGA Paes_0260 270826 - 269510 - | threonine synthase TERM 284 270309 - 270337 + g 74 -8.1 -4.11692 | overlap 270303 270301 TTTCCTCCTGCGGTT GTCAGCTGCTGTT CCT GAAGGCGGCTGAC TTTTCCGGATGGATA Paes_0261 271816 - 270854 - | homoserine kinase TERM 285 270944 - 270956 + g 72 -6.9 -4.1964 | AAATGCGTTTCTCAT GGCTG TAC CGGCC TTTTCGGCTGTTGCG Paes_0262 272041 - 273621 + | ATP synthase F1, alpha subunit Paes_0263 273667 - 274545 + | ATP synthase F1, gamma subunit TERM 286 274574 - 274592 + F 100 -12.4 -6.23209 | opp_overlap 274574 TGACAGATTATGGAA GCGCCCTT CAA GAGGGCGC TTTTTTTTTCATTAC TERM 287 274592 - 274574 - f 81 -11.7 -3.12606 | opp_overlap 274574 TGACAGATTATGGAA GCGCCCT TCAAG AGGGCGC TTTTTTTTTCATTAC TERM 288 274692 - 274713 + F 73 -2.9 -5.07652 | TTTGGATTTTCGGTT CTCCCATCA GAAA TTAGGGGAG TTTTCTTTTACACAC TERM 289 275778 - 275789 + G 82 -3 -5.27335 | GTCTTGCCCGCCATA TGAT CAAT ATCA TTTTTATTTCACAGG Paes_0264 274748 - 277207 + | aspartate kinase TERM 290 277386 - 277398 + G 71 -9.1 -3.52995 | overlap 277384 AGTGCAGCGACTCTC TCGGC CGC GCCGA TCTTGTTCTGGTTAC Paes_0265 277208 - 278500 + | competence/damage-inducible protein CinA Paes_0266 279088 - 278549 - | hypothetical protein TERM 291 278580 - 278594 + g 76 -4.2 -4.88405 | TCCAGATCGAGTGTG TAGCGG ACC CCGTTG TTTTCTTTGACCGTT Paes_0267 279230 - 281098 + | DNA mismatch repair protein MutL TERM 292 281296 - 281253 - T 100 -16.3 -3.09968 | opp_overlap 281259 281267, overlap 281267 CAGGTAAGTGGAATA CGTCAACACAAAAAGCAGG TTTTTG CCTGCTTTTTGTGTTGATA GAAAAAATCCCTCTT TERM 293 281259 - 281290 + T 100 -16.8 -3.14344 | opp_overlap 281253 281267, overlap 281267 AGTGGAATACGTCAA CACAAAAAGCAGGT TTTT GCCTGCTTTTTGTG TTGATAGAAAAAATC TERM 294 281267 - 281282 + T 84 -6.8 -5.1244 | opp_overlap 281253 281267, overlap 281259 ACGTCAACACAAAAA GCAGGT TTTT GCCTGC TTTTTGTGTTGATAG TERM 295 281282 - 281267 - T 83 -6.1 -5.09762 | opp_overlap 281267 281259, overlap 281253 ACGTCAACACAAAAA GCAGG TTTTTG CCTGC TTTTTGTGTTGATAG Paes_0268 281798 - 281310 - | cytochrome c class I Paes_0269 281931 - 282623 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 296 283044 - 283028 - g 76 -7.9 -4.26903 | GGCATGCGATCAAAA GCCCGAC GTC ACCGGGC GCATGAACTCCTCGA TERM 297 283301 - 283315 + G 70 -5.7 -4.30719 | opp_overlap 283281 GAGGCGGAGCGTCTC TGCGA CAGGA TCGCA TTTATTGTCGGAGGC Paes_0270 282692 - 283669 + | ABC transporter related TERM 298 284085 - 284100 + G 70 -6.1 -4.21351 | overlap 284077 TGCAGTTGTGATGAT CGCTG TGGTGT CAGCG TTTCTTGGCCTGTTT Paes_0271 283666 - 284403 + | ABC-2 type transporter Paes_0272 285260 - 284397 - | protein of unknown function DUF52 Paes_0273 286546 - 285752 - | Diaminopimelate epimerase TERM 299 286667 - 286652 - H 81 -3.4 -5.43866 | opp_overlap 286647 286652 GAAGCCCCAAAAAAA TTTATT ATTA AATAAA TTTTCTTATCTTAAT TERM 300 286652 - 286667 + H 72 -3.4 -4.91285 | opp_overlap 286652, overlap 286647 GAAGCCCCAAAAAAA TTTATT ATTA AATAAA TTTTCTTATCTTAAT Paes_0274 286929 - 289124 + | photosystem P840 reaction center, large subunit TERM 301 289152 - 289137 - f 100 -11.8 -4.63527 | opp_overlap 289137 289140 TGATCACTGTAAAAA GGGGCC GCAA GGCCCC TTTGCGGATCATATG TERM 302 289137 - 289152 + F 89 -11.8 -3.5882 | opp_overlap 289137, overlap 289140 TGATCACTGTAAAAA GGGGCC GCAA GGCCCC TTTGCGGATCATATG Paes_0275 289213 - 289884 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 303 289939 - 289914 - f 100 -6.2 -5.50499 | opp_overlap 289914 TGACACTCAAAAAAA GCATTGTTTC TTACCG GAGACAATGC TTTTTTTTTATCTAC TERM 304 289914 - 289939 + F 100 -9.1 -6.30182 | opp_overlap 289914 TGACACTCAAAAAAA GCATTGTTTCT TACC GGAGACAATGC TTTTTTTTTATCTAC TERM 305 290191 - 290169 - g 73 -4.2 -4.73682 | gap 1, opp_overlap 290171 290172, overlap 290172 CGTCAGAACACAAAA GAA-GCGGT ATGGTG ACCGCCTTC ATCTTATTGAACGAG TERM 306 290187 - 290172 - g 74 -6.1 -4.46621 | opp_overlap 290171 290172, overlap 290169 CAGAACACAAAAGAA GCGGT ATGGTG ACCGC CTTCATCTTATTGAA Paes_0276 289999 - 290736 + | Dolichyl-phosphate beta-D-mannosyltransferase Paes_0277 292880 - 290808 - | small GTP-binding protein TERM 307 291808 - 291832 + g 72 -6.4 -4.39426 | gap 1, overlap 291809 GGAATTTTTTTCTCA CCGGCCATGGT ATAG ACC-TGGCCGA TTTTCTCAAGCTGTC TERM 308 291809 - 291831 + g 70 -9.9 -3.23174 | gap 1, overlap 291808 GAATTTTTTTCTCAC CGGCCATGGT ATAG ACC-TGGCCG ATTTTCTCAAGCTGT TERM 309 292911 - 292923 + H 77 -10.5 -3.53811 | ATTTTGATTGCTGAT GGCCC GGA GGGCC TTTCCAGACAATGGC TERM 310 293608 - 293639 + G 95 -12.2 -4.10179 | opp_overlap 293608 293609, overlap 293609 CGGGACACCTAATAA GTCCAAGCTGGGCG CTAA CGCCCTGCTTGGGG TTTCTCTGGCTTGTG TERM 311 293639 - 293608 - g 77 -10 -3.70773 | opp_overlap 293608 293609, overlap 293609 CGGGACACCTAATAA GTCCAAGCTGGGCG CTAA CGCCCTGCTTGGGG TTTCTCTGGCTTGTG TERM 312 293609 - 293638 + G 95 -15.7 -3.05384 | opp_overlap 293608 293609, overlap 293608 GGGACACCTAATAAG TCCAAGCTGGGCG CTAA CGCCCTGCTTGGG GTTTCTCTGGCTTGT TERM 313 293638 - 293609 - g 81 -13.5 -2.82142 | opp_overlap 293609 293608, overlap 293608 GGGACACCTAATAAG TCCAAGCTGGGCG CTAA CGCCCTGCTTGGG GTTTCTCTGGCTTGT Paes_0278 293303 - 294616 + | Phosphopyruvate hydratase TERM 314 294622 - 294656 + F 93 -13.9 -3.21099 | gap 1, opp_overlap 294630, overlap 294630 CAGGGTCTGAAGCTG CAAGAAAAGGAACCTC GAAA GAGGTTCCTTTT-TTG TTCATACTCAAGCAG TERM 315 294630 - 294649 + F 100 -12.2 -5.52023 | opp_overlap 294630, overlap 294622 GAAGCTGCAAGAAAA GGAACCTC GAAA GAGGTTCC TTTTTTGTTCATACT TERM 316 294649 - 294630 - f 100 -12.2 -4.65747 | opp_overlap 294630 294622 GAAGCTGCAAGAAAA GGAACCTC GAAA GAGGTTCC TTTTTTGTTCATACT Paes_0279 294843 - 295163 + | Septum formation initiator Paes_0280 295221 - 297254 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Paes_0281 297288 - 298055 + | short-chain dehydrogenase/reductase SDR TERM 317 298045 - 298065 + F 84 -4.7 -5.40072 | gap 1, opp_overlap 298031 TCGCCGCATTTCTGG CGC-CCCT GTAGGG AGGGAGCG TTTTTTTGAGAAGAA Paes_0282 298567 - 298758 + | preprotein translocase, SecE subunit Paes_0283 298779 - 299354 + | NusG antitermination factor Paes_0284 299396 - 299821 + | ribosomal protein L11 TERM 318 299852 - 299868 + F 74 -3.6 -5.03145 | overlap 299854 TGGTAACTGTTGTGG GAGACC GAACA GGTCGC TTTTTTAACCACTTA Paes_0285 299896 - 300585 + | ribosomal protein L1 TERM 319 300919 - 300909 - g 77 -3.2 -5.1356 | GTTCAGCAAGAAAAA CGAG AAC CTCA AATTCAAGATGGCCG Paes_0286 300604 - 301122 + | ribosomal protein L10 Paes_0287 301199 - 301579 + | ribosomal protein L7/L12 TERM 320 301608 - 301632 + F 78 -10 -3.65828 | opp_overlap 301608 301627, overlap 301627 TCATTACGATAATAA GCTCCGTGTC GCAAA GAGACGGAGC TTTGCCCGTTTGTAT TERM 321 301632 - 301608 - f 80 -10 -3.85864 | opp_overlap 301608 301627, overlap 301627 TCATTACGATAATAA GCTCCGTGTC GCAAA GAGACGGAGC TTTGCCCGTTTGTAT TERM 322 302155 - 302129 - g 72 -8.6 -3.73953 | opp_overlap 302145, overlap 302133 302144 302145 ACGAGCCTGATGAAA CCGACTGGAAGG AAA CCATCCAGCAGG AGGTCTATCTCGGCA TERM 323 303343 - 303321 - g 70 -9.9 -3.24747 | opp_overlap 303324, overlap 303325 CGCGGAGATGACCAA CAAACGCAG GGTTT CTGCGCTTG GTCCCGGCGGTCTTA TERM 324 303339 - 303325 - g 72 -7.1 -4.28111 | opp_overlap 303324, overlap 303321 GAGATGACCAACAAA CGCAG GGTTT CTGCG CTTGGTCCCGGCGGT TERM 325 303871 - 303881 + G 72 -8.2 -3.77808 | GAGGCGAAGGTCGCG CGGG ATT CCCG TTCTGTTATAGTCGC Paes_0288 301789 - 305694 + | DNA-directed RNA polymerase, beta subunit TERM 326 305789 - 305805 + G 77 -7.3 -4.58395 | TTTTCACAGGGATCA TCGCCTT TCA AAGGTGA TTTTTCAAAGATAAA TERM 327 305877 - 305822 - g 71 -3.1 -4.78848 | opp_overlap 305830 305836 TTTTCAAAGATAAAA TTCAGCATCGCTTCGCCAGAAAGCG TTCTTG CTCATTCACGCGGAGAGGTGCTGAA GCCTGAGACGATAAA TERM 328 306250 - 306224 - g 81 -5.8 -4.83615 | GATCCGGGAGAAAAA CAGGGGATCAAG AAG CTTGACCGACTG ACTGAGGAACAGTAT TERM 329 306529 - 306510 - g 71 -3.4 -4.78839 | opp_overlap 306510, overlap 306497 AACCGCAGAAGAAAA CCCGGAAG AAAC CTGGCGGG CTTTTCCCTGAGGAC TERM 330 307392 - 307410 + G 71 -11 -2.95298 | CTGTTACTGTTCCTT CTCAGGAC ATG GTCCTGGG TATGTACTACCTGAC Paes_0289 305768 - 310267 + | DNA-directed RNA polymerase, beta' subunit TERM 331 310397 - 310341 - T 82 -12.6 -2.72471 | gap 1, opp_overlap 310341 310358, overlap 310358 TCCGGATCAGATAAC GCCTGGAA-AATAAAAAAGCTGTCCCC TCTG GGAGACAGCTTTTTTTTTGTTGCAGGA TGGTCTCGGAATTTT TERM 332 310341 - 310397 + T 77 -11.2 -2.64375 | gap 2, opp_overlap 310341 310358, overlap 310358 TCCGGATCAGATAAC GCCTGGAA-AATAAAAAAGCTGTC-CCC TCT GGGAGACAGCTTTTTTTTTGTTGCAGGA TGGTCTCGGAATTTT TERM 333 310379 - 310358 - T 100 -12.3 -5.79595 | opp_overlap 310341 310358, overlap 310341 CTGGAAAATAAAAAA GCTGTCCCC TCTG GGAGACAGC TTTTTTTTTGTTGCA TERM 334 310358 - 310379 + T 100 -10.9 -6.36459 | gap 1, opp_overlap 310358 310341, overlap 310341 CTGGAAAATAAAAAA GCTGTC-CCC TCT GGGAGACAGC TTTTTTTTTGTTGCA Paes_0290 311759 - 310413 - | acetyl-CoA carboxylase, biotin carboxylase Paes_0291 312243 - 311776 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Paes_0292 312859 - 312293 - | translation elongation factor P Paes_0293 313069 - 313353 + | histone family protein DNA-binding protein TERM 335 313387 - 313412 + F 95 -7.5 -5.38047 | opp_overlap 313387 TTATGTTTTATCCAA GTCCATCCGGC ATGC GCTCGATGGGC TTTTTTATATCACTC Paes_0294 313443 - 314450 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 336 314522 - 314490 - T 100 -13.6 -3.41527 | opp_overlap 314498, overlap 314491 314498 GAATTTTGATTATAA TTAAAAAAGCCGGC GTGAT GCCGGCTTTTTTAT TGGGTTGTCTGCACT TERM 337 314521 - 314491 - T 100 -17.1 -2.64595 | opp_overlap 314498, overlap 314490 314498 AATTTTGATTATAAT TAAAAAAGCCGGC GTGAT GCCGGCTTTTTTA TTGGGTTGTCTGCAC TERM 338 314514 - 314498 - T 100 -10.8 -5.33848 | opp_overlap 314498, overlap 314491 314490 ATTATAATTAAAAAA GCCGGC GTGAT GCCGGC TTTTTTATTGGGTTG TERM 339 314498 - 314514 + T 100 -11.5 -5.5074 | opp_overlap 314498 314491 314490 ATTATAATTAAAAAA GCCGGCG TGA TGCCGGC TTTTTTATTGGGTTG Paes_0295 315576 - 314545 - | thiamine pyrophosphate protein domain protein TPP-binding Paes_0296 317463 - 315580 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Paes_0297 317926 - 317657 - | hypothetical protein TERM 340 317801 - 317814 + g 85 -3.1 -5.44721 | gap 1, overlap 317798 317799 CATCTGATCCATCCA GCAACC GTT GGT-GC TTTTTTTGACCTCAT Paes_0298 318238 - 317984 - | hypothetical protein Paes_0299 318300 - 318944 + | PAS domain containing protein Paes_0300 319430 - 318972 - | Cupin 2 conserved barrel domain protein Paes_0301 319788 - 319916 + | hypothetical protein TERM 341 319939 - 319956 + F 100 -14.1 -5.5074 | CATGACGACTGTCCT GCCGGGG AAAT CCCCGGC TTTTTTGTTACATTA TERM 342 322618 - 322595 - g 80 -5.1 -5.0133 | GATCTCGTCAAAAAA GCCGCTCAG GAGGTG CAGGGCGGC GGCGGTGGAAAACCC Paes_0302 320066 - 322723 + | alanyl-tRNA synthetase TERM 343 322912 - 322898 - g 74 -2.8 -5.0133 | GAGGCCTGGAAAAAA GAGG TGGCAAG CCTC ATCGGCAGCAAGGCC Paes_0303 322742 - 323236 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Paes_0304 323602 - 323745 + | hypothetical protein Paes_0305 323828 - 324112 + | hypothetical protein TERM 344 324120 - 324102 - f 78 -8.8 -4.0098 | CGGCAACCCAAACAA GCGCTCGT TGA AAGAGCGC TCAAAATGATTGTCT TERM 345 324151 - 324171 + F 100 -9.7 -5.74122 | TTTGAGACATACTGA CAGGGGG CCGAAAA CCCCCTG TTTTTTTATCTCATA TERM 346 325270 - 325291 + G 70 -10.1 -3.2375 | opp_overlap 325267 325270, overlap 325266 AAGGGAGATAAAGGA GGGCGGACA TTCC TGTCCGCCA TTACATTCTGAACTC Paes_0306 324560 - 326203 + | N-6 DNA methylase TERM 347 326214 - 326235 + F 73 -10.1 -3.05816 | opp_overlap 326214 326212 326211 TATGAATACAAAGGA GGGCGGACT TTCC AGTCCGCCA TTACATACAAGGTCA TERM 348 326235 - 326214 - f 73 -10.1 -3.12253 | opp_overlap 326214, overlap 326212 326211 TATGAATACAAAGGA GGGCGGACT TTCC AGTCCGCCA TTACATACAAGGTCA TERM 349 326480 - 326512 + G 100 -14.9 -3.47349 | overlap 326472 TGCGGAGTACGGTCG GCAGATTGTCGCCTC GCT GGGGCGACAATTGGC TTCTGAGTTTGGGGC TERM 350 326617 - 326591 - g 78 -8 -4.30576 | opp_overlap 326574, overlap 326593 TTTTCACGATGAAAA GATTGTCGCCGC ACT GCAACGACAATT GAGCTGGACTCACTT TERM 351 326615 - 326593 - g 84 -10.6 -3.7574 | overlap 326591 TTCACGATGAAAAGA TTGTCGCCGC ACT GCAACGACAA TTGAGCTGGACTCAC TERM 352 326870 - 326884 + G 70 -5.6 -4.36914 | CATCCTCGATTTTCT CGGCCT CAA AGACCG TTTTCTCGAGAAGGA Paes_0307 326256 - 327350 + | protein of unknown function DUF1016 TERM 353 327439 - 327418 - g 77 -10.1 -3.66784 | opp_overlap 327418, overlap 327419 327433 CTATCCGGAATATAA TGGCGGGTT GGAA AACCCGCCC TCCGTTGAAAGAGAT TERM 354 327438 - 327419 - g 85 -13.6 -2.79749 | opp_overlap 327418, overlap 327418 327433 TATCCGGAATATAAT GGCGGGTT GGAA AACCCGCC CTCCGTTGAAAGAGA TERM 355 328581 - 328565 - g 76 -12.3 -2.65161 | opp_overlap 328565 328564, overlap 328564 328562 AAATTTGAAGAACAG GCGGCTA TGA TAGCCGC GTTTGAATCACTTGA TERM 356 328565 - 328581 + G 77 -12.3 -2.8085 | opp_overlap 328564 328562 328565, overlap 328564 AAATTTGAAGAACAG GCGGCTA TGA TAGCCGC GTTTGAATCACTTGA Paes_0308 327347 - 328717 + | restriction modification system DNA specificity domain Paes_0309 328734 - 329924 + | hypothetical protein Paes_0310 329921 - 331960 + | protein of unknown function DUF87 TERM 357 332076 - 332097 + G 70 -10.1 -3.17075 | opp_overlap 332073 332072 332076 AAGCGGAGAAACGGA GGGCGGGTT TTCC AACCCGCCA TTACATTCCAACAGG TERM 358 332191 - 332170 - g 100 -10.1 -4.78572 | opp_overlap 332170, overlap 332171 TGGCAAGCAAGAAAA TGGCGGACA GGAA TGTCCGCCC TCCGTTAAATCATTG TERM 359 332190 - 332171 - g 95 -13.6 -3.4642 | opp_overlap 332170, overlap 332170 GGCAAGCAAGAAAAT GGCGGACA GGAA TGTCCGCC CTCCGTTAAATCATT TERM 360 332716 - 332737 + G 70 -10.1 -3.25786 | opp_overlap 332712 332716, overlap 332712 332730 CGAGTGGAGAACGGA GGGCGGACT TTCC AGTCCGCCA TTACATTCTGATGTG TERM 361 332866 - 332845 - g 77 -10.1 -3.58731 | opp_overlap 332845 332846, overlap 332846 AAAAGAGGGGGGAAA TGGCGGGTT GGAA AACCCGCCC TCCTTTCTTGACCCG TERM 362 332865 - 332846 - g 85 -13.6 -2.74515 | opp_overlap 332845 332846, overlap 332845 AAAGAGGGGGGAAAT GGCGGGTT GGAA AACCCGCC CTCCTTTCTTGACCC TERM 363 332846 - 332869 + G 70 -5.8 -4.15044 | opp_overlap 332846 332845, overlap 332845 AAAGAGGGGGGAAAT GGCGGGTTGG AAAA CCCGCCCTCC TTTCTTGACCCGGAG TERM 364 333450 - 333427 - g 70 -5.8 -4.27467 | opp_overlap 333430 TGAGAATCCAATAAA GGGGGGCGGG TTTT CCAACCCGCC ATTACATTCTTATTT TERM 365 333430 - 333451 + G 72 -10.1 -3.3614 | opp_overlap 333427 GAATCCAATAAAGGG GGGCGGGTT TTCC AACCCGCCA TTACATTCTTATTTT TERM 366 333585 - 333565 - g 83 -6.2 -5.00616 | gap 1, opp_overlap 333566, overlap 333566 333567 GCTGTTCGGAAAAAA TGGCGGACA GGAA TGTCCGC-A CTCCGTTGAAGATAA TERM 367 333584 - 333567 - g 73 -11.3 -2.75708 | opp_overlap 333566, overlap 333565 333566 TGTTCGGAAAAAATG GCGGACA GGAA TGTCCGC ACTCCGTTGAAGATA TERM 368 333599 - 333624 + G 74 -7.5 -4.07568 | opp_overlap 333601 333602 333616, overlap 333601 333602 CACTCCGTTGAAGAT AATGGCGGGTT TGAA AACCCGCCCTC TTTTCAAGAAAAGGC TERM 369 333601 - 333622 + G 77 -10.1 -3.63744 | opp_overlap 333601 333602 333616, overlap 333599 333602 CTCCGTTGAAGATAA TGGCGGGTT TGAA AACCCGCCC TCTTTTCAAGAAAAG TERM 370 333622 - 333601 - g 77 -10.1 -3.65812 | opp_overlap 333601 333599 333602, overlap 333602 333616 CTCCGTTGAAGATAA TGGCGGGTT TGAA AACCCGCCC TCTTTTCAAGAAAAG TERM 371 333621 - 333602 - g 85 -13.6 -2.79273 | opp_overlap 333601 333599 333602, overlap 333601 333616 TCCGTTGAAGATAAT GGCGGGTT TGAA AACCCGCC CTCTTTTCAAGAAAA TERM 372 333602 - 333621 + G 85 -13.6 -2.78032 | opp_overlap 333602 333601 333616, overlap 333601 333599 TCCGTTGAAGATAAT GGCGGGTT TGAA AACCCGCC CTCTTTTCAAGAAAA TERM 373 333657 - 333637 - g 75 -5.3 -4.63218 | overlap 333616 CTCTTTTCAAGAAAA GGCCAGGCT GGA AGCATTGCC ATTACAGTCAAAAGA TERM 374 333706 - 333685 - g 95 -10.1 -4.68705 | opp_overlap 333685 333682, overlap 333686 AGAAGTTCAAGAAAA TGGCGGACA GGAA TGTCCGCCC TCCTTTCCCGGTCGT TERM 375 333705 - 333686 - g 95 -13.6 -3.40139 | opp_overlap 333685 333682, overlap 333685 GAAGTTCAAGAAAAT GGCGGACA GGAA TGTCCGCC CTCCTTTCCCGGTCG TERM 376 335141 - 335162 + G 70 -10.1 -3.17075 | opp_overlap 335141 ATGGAGGCTATAGGA GGGCGGACT TTCC AGTCCGCCA TTGGATTACAAACGG TERM 377 335281 - 335260 - g 72 -10.1 -3.34455 | opp_overlap 335257 335260, overlap 335255 TGAGGATAAATGTAA TGGCGGACT GGAA AGTCCGCCC TCCTTTACGTTCAAT Paes_0311 331973 - 336091 + | type I site-specific deoxyribonuclease, HsdR family Paes_0312 336095 - 336415 + | protein of unknown function DUF45 TERM 378 337508 - 337518 + G 70 -5.4 -4.41616 | GTCGGTGATTGCGCG GAGA AGT TCTC TTTCTTTACCCGCAT TERM 379 337623 - 337640 + G 72 -5.5 -4.53303 | CCCGCTTGAGAACAT TCGGCGG TACC CTGTCGA TTTTCTCTACCGCTA Paes_0313 336668 - 338020 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 380 338149 - 338114 - T 100 -25 -3.32844 | opp_overlap 338116 338120 338124, overlap 338120 338124 TTTTCTATTGGACAA TAGTAACGAAGCCCGG TTTA CCGGGCTTCGTTACTA TTGAGCGAATCGCGG TERM 381 338116 - 338147 + T 100 -23.2 -3.02511 | opp_overlap 338114 338120 338124, overlap 338120 338124 TTCTATTGGACAATA GTAACGAAGCCCGG TTTA CCGGGCTTCGTTAC TATTGAGCGAATCGC TERM 382 338120 - 338143 + T 100 -18.2 -3.36273 | opp_overlap 338120 338114 338124, overlap 338116 338124 ATTGGACAATAGTAA CGAAGCCCGG TTTA CCGGGCTTCG TTACTATTGAGCGAA TERM 383 338143 - 338120 - T 100 -18.2 -3.42013 | opp_overlap 338116 338120 338124, overlap 338114 338124 ATTGGACAATAGTAA CGAAGCCCGG TTTA CCGGGCTTCG TTACTATTGAGCGAA TERM 384 338139 - 338124 - T 88 -11.8 -3.4684 | opp_overlap 338120 338116 338124, overlap 338120 338114 GACAATAGTAACGAA GCCCGG TTTA CCGGGC TTCGTTACTATTGAG TERM 385 338124 - 338139 + T 88 -11.8 -3.45768 | opp_overlap 338124 338120 338114, overlap 338120 338116 GACAATAGTAACGAA GCCCGG TTTA CCGGGC TTCGTTACTATTGAG Paes_0314 339363 - 338131 - | phosphoserine phosphatase SerB TERM 386 338303 - 338321 + g 95 -12.4 -4.1673 | GGCAGGTCGTTTGCT CCGTCGCC GAC GGCGATGG TTTGTTCCAGGCTTA TERM 387 338362 - 338378 + g 71 -2.9 -4.74103 | TGTTGCGATCTGTTC GAGCAGC TCC GCTTTTC TTTTTCCGTTGACGA Paes_0315 340962 - 339406 - | GMP synthase, large subunit Paes_0316 343234 - 340982 - | penicillin-binding protein, 1A family TERM 388 341436 - 341460 + g 70 -5.8 -4.2717 | opp_overlap 341443, overlap 341439 TTGATGCCGTATCTC GATGGAAC-GGC GAT GCCTGTTCC-TC TTTTGATGACGTCCT TERM 389 341439 - 341458 + g 72 -8.6 -3.73756 | gap 1, opp_overlap 341443, overlap 341436 ATGCCGTATCTCGAT GGAAC-GGC GAT GCCTGTTCC TCTTTTGATGACGTC TERM 390 342797 - 342818 + g 72 -5.2 -4.57569 | gap 1, overlap 342786 342797 TTTTCGGTCGACAGT CC-GTTCCT GGGTG AGGAACAGG TTTTTGGCCAGCTGC TERM 391 342995 - 343010 + g 75 -4.6 -4.7373 | overlap 342997 CGAGATGGATTTCAG CGGCAC GTAG GTGCGG TTTTTCATGAAATAC Paes_0317 344235 - 343309 - | alpha/beta hydrolase fold Paes_0318 344606 - 345079 + | transcription activator effector binding TERM 392 345673 - 345663 - g 81 -6.8 -4.72986 | GATTTTCAGGAAAAA CTGC TCT GCAG TGGCTGGCGATGCAC TERM 393 346064 - 346080 + G 90 -9.3 -4.51378 | overlap 346038 CTCAACAGACAGCCT GCGCCCC TTT GGGGGGC TTTTGTGCTCTACCT Paes_0319 345149 - 346618 + | amine oxidase TERM 394 347563 - 347577 + G 79 -3.5 -5.05782 | opp_overlap 347552, overlap 347552 AAAGCCGCCTGGGCG CTTCG CCATC CGGAG TTTTTTCCCGTCGAT Paes_0320 346621 - 347880 + | hypothetical protein Paes_0321 347941 - 348693 + | hypothetical protein Paes_0322 349134 - 349430 + | hypothetical protein Paes_0323 349593 - 350594 + | hypothetical protein TERM 395 351010 - 351020 + G 74 -3.2 -4.91712 | GCGCCAATCCTCTGT CAGC AAG GTTG TTTTTGTCAGTTCAA Paes_0324 350687 - 351523 + | NAD-dependent epimerase/dehydratase TERM 396 351601 - 351621 + F 71 -8.3 -3.53444 | AGAAATACTGTGGTG CCGGTCA TCTCTCC TGACCGG TTTAAAAGGGAATCC TERM 397 352772 - 352793 + G 83 -10.2 -4.14243 | opp_overlap 352759 352751 AACCGACAGGGCATT TCTTGCCG GTATCG CGGCAAGA TTTTAGGATGAGCTG Paes_0325 352020 - 352799 + | hypothetical protein Paes_0326 353017 - 353589 + | ATP/cobalamin adenosyltransferase TERM 398 353594 - 353607 + G 79 -4.5 -4.90266 | overlap 353595 AAAAATCCTGATTGA TGCAG AAGC CTGCG TTTTTACTTGCTGCG Paes_0327 353593 - 354915 + | cobyrinic acid a,c-diamide synthase Paes_0328 355014 - 355547 + | hypothetical protein Paes_0329 356007 - 355537 - | hypothetical protein TERM 399 357385 - 357367 - g 81 -6.6 -4.7173 | opp_overlap 357367 357369 CAGTATATCGAAAAA GACGGCGC TCT GGACCGTC GTTTTCAGAAGATTA TERM 400 357697 - 357672 - g 90 -4.7 -5.43866 | opp_overlap 357676 CAAGGCGGAAAAAAA CAAGGTTGTGC GTAT GCAGAACTTTG AAGAAGCTGCCATGC TERM 401 357743 - 357729 - g 70 -4.3 -4.48987 | overlap 357724 GCGCGACAAGGAAAA GAATC TTCTT GATTC GCTCGAAGATGCCAA TERM 402 358849 - 358831 - g 88 -5.3 -5.26119 | gap 1 GCTCGAAAAACAAAA CGTC-AGG AGCC CCTTGACG AGGAACTGACAGACG Paes_0330 356332 - 358881 + | ATPase AAA-2 domain protein TERM 403 358909 - 358889 - T 100 -15.5 -4.93547 | opp_overlap 358889 GTAATTAATCAAAAA GGCAGCTGA ACA TCAGCTGCC TTTTTTTTTGACTGG TERM 404 358889 - 358909 + T 100 -15.5 -6.11644 | opp_overlap 358889 GTAATTAATCAAAAA GGCAGCTGA ACA TCAGCTGCC TTTTTTTTTGACTGG Paes_0331 360389 - 359025 - | pyridoxal-phosphate dependent TrpB-like enzyme Paes_0332 361699 - 360635 - | thiamine-monophosphate kinase TERM 405 361114 - 361134 + g 71 -2.6 -5.00616 | gap 1, overlap 361117 ATGGTTCGCCGTTCT GGA-CATGG TCCA TCATGATCC TTTTTTCGCGCAGGA Paes_0334 363325 - 362699 - | hypothetical protein Paes_0333 361803 - 362750 + | signal recognition particle-docking protein FtsY TERM 406 363521 - 363534 + G 100 -4.5 -5.52909 | TGATGCTTTTCTTCA GGTGC CCCG GCATC TTTTTTTCGATATTG Paes_0335 363381 - 364085 + | protein-L-isoaspartate O-methyltransferase TERM 407 364098 - 364111 + F 86 -2.3 -5.626 | overlap 364099 TAAGCGTTTATGGTT ACAGC GGAG GCTGA TTTTTTTCTGCGGTG Paes_0336 364323 - 366407 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 408 366428 - 366459 + T 80 -8.7 -4.19678 | opp_overlap 366428 TCGGAGGTCAATAAA CGCATCATCCCTC GTTCTG GAGGGGGGATGTG TTTATTGCAGTATAG Paes_0337 368252 - 366477 - | phosphoenolpyruvate-protein phosphotransferase TERM 409 366504 - 366530 + g 100 -16 -5.42198 | opp_overlap 366502 ATTCTGCGGAACATG GCGCATCTGAAA CTC TTTCAGGTGCGC TTTTATTTTTTCCGA TERM 410 367743 - 367753 + g 72 -6.8 -4.28432 | opp_overlap 367742 GGACACGACAATCAT TCCC TCA GGGA TTTTAGATTGCAGTT Paes_0338 369862 - 368312 - | replicative DNA helicase Paes_0339 370501 - 369872 - | phage SPO1 DNA polymerase-related protein Paes_0340 371778 - 370540 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase TERM 411 371201 - 371214 + g 75 -5.2 -4.62069 | overlap 371199 TTTTTGTCTTGAAGG CGGC TGGACT GCCG TTTTTCGCCTAAGGA Paes_0341 376396 - 371888 - | hypothetical protein TERM 412 371949 - 371969 + g 76 -10.5 -3.33798 | overlap 371947 TCATAAAAGCGTTCG CGGTATGAG AGA CTTATACCG TATGTTTCTGCCGGT TERM 413 373357 - 373368 + g 70 -3.6 -4.64676 | TTTCAGTCGGGGTGA CGGT GATG GCCG TTTTGTTGAAGGTCG TERM 414 374470 - 374480 + g 70 -6.8 -4.13767 | overlap 374477 GGGGGACTTCCGGTT CCAG ATC CTGG TTTTCGGATAGCCAG TERM 415 375034 - 375046 + g 72 -6.2 -4.43879 | GCAGTGACTCAGGTT GGGG AAGTA CCCC TTTTCCTTCAATGGT Paes_0342 377012 - 376494 - | rfaE bifunctional protein TERM 416 376856 - 376872 + g 70 -7.2 -4.14472 | opp_overlap 376848 376852 CGACAACCAGACGGT CGCCTG CCGAA CGGGCG TTTTCAAGATATTGG TERM 417 377849 - 377873 + G 73 -4.1 -4.83615 | GGCGGTTTTGTCATG CCGTTTCTGGG TCG TCCGGCATCGG TTTTTCTCGGCCCTG Paes_0343 377216 - 378121 + | lipid A biosynthesis acyltransferase Paes_0344 378274 - 379005 + | hypothetical protein Paes_0345 379007 - 380017 + | hypothetical protein TERM 418 380393 - 380403 + G 95 -6.8 -5.42259 | AGGTCCTATTCGGTG CAGG TAT CCTG TTTTTTTGAGGGTGG Paes_0346 380043 - 381086 + | hypothetical protein Paes_0347 383036 - 381093 - | ABC transporter related TERM 419 381603 - 381572 - G 73 -11.8 -2.60555 | overlap 381569 381568 381597 GAACGCCATAACCGA TATTCTGTTCAATG GAGT CATTGAACAGAATG ACCTCCTGACTGACG TERM 420 382045 - 382031 - G 71 -2.8 -4.81249 | GGGTAAATGCAAAAA GCAACA GTT CATTGC CCTCCATTCTTCCCT TERM 421 383423 - 383439 + H 70 -5.7 -4.35042 | opp_overlap 383423, overlap 383414 ATTTTTCCAGAAAAC CGCAGGG TTG CCTGGCG TTCTTTTGTGCTCAA TERM 422 384059 - 384078 + GH 100 -5 -6.25578 | gap 1, opp_overlap 384054, overlap 384060 TCAGATGAAACGCAG TGGTTG-CG ATA CGTCAACCG TTTTTTTTCTTTACT TERM 423 384060 - 384077 + GH 73 -6.3 -4.31687 | gap 1, opp_overlap 384054, overlap 384059 CAGATGAAACGCAGT GGTTG-CG ATA CGTCAACC GTTTTTTTTCTTTAC Paes_0348 383576 - 384997 + | glycosyl transferase family 2 Paes_0349 384951 - 385394 + | hypothetical protein Paes_0350 386212 - 385406 - | hypothetical protein Paes_0351 387410 - 386286 - | glycosyl transferase group 1 Paes_0352 388395 - 387427 - | glycosyl transferase group 1 TERM 424 388312 - 388324 + g 81 -4.8 -5.11033 | overlap 388306 ATAGACGGACTGGTT CCTG AAAGC CAGG TTTTTTCGGGTTATG Paes_0353 389524 - 388520 - | glycosyl transferase family 2 TERM 425 388878 - 388889 + g 74 -5.8 -4.53334 | ACGAGTCTTGCGATC GCAG CCTG CTGC TTTCCTTTTTTCTTT Paes_0354 390702 - 389665 - | glycosyl transferase family 9 TERM 426 390139 - 390118 - G 70 -6.6 -4.13728 | opp_overlap 390112 390111 GAGAGATGCCGAAAA GGTTTCGA TTTCTT CCGAAACC GGCATCGGAGGGATG TERM 427 390283 - 390294 + g 72 -5.8 -4.32046 | CCGATGAAAGTCATT GTCG ATAC CGAC TTTGCTTTTTGCGCG Paes_0355 391793 - 390699 - | glycosyl transferase group 1 Paes_0356 392898 - 391813 - | glycosyl transferase group 1 TERM 428 392596 - 392619 + g 83 -5.2 -5.13722 | GCCTGTAATCCGGCT GACGATGCCT GCAA GGGCGTAGTC TTTTCTTTTAGTGGG TERM 429 392891 - 392916 + g 76 -3.9 -5.00388 | gap 1, overlap 392876 392904 ATTGTCTTGCGGATG GCG-CCCATCCT GAC AAGACGGGTCGC TTTGTTTTTCGTTTA TERM 430 392904 - 392920 + H 73 -2.9 -5.04601 | overlap 392876 392891 TGGCGCCCATCCTGA CAAGACG GGT CGCTTTG TTTTTCGTTTATGGG Paes_0357 393155 - 393769 + | hypothetical protein Paes_0358 394842 - 393748 - | glycosyl transferase group 1 TERM 431 395124 - 395134 + G 70 -6.8 -4.02817 | GGTTCAGGTGGCGGG CCAG GTT CTGG TTCTTGTTCTGCCAG TERM 432 395460 - 395472 + G 100 -2.7 -5.75342 | TGCAATTGTTCCGGC CTTTT GCG AAGAG TTTTTTTTCCGAGGC Paes_0359 394906 - 395871 + | Abortive infection protein TERM 433 395925 - 395937 + G 71 -9.1 -3.4376 | opp_overlap 395924, overlap 395933 AATAATCCATCCAAT CTCGC TCA GCGAG TTATAGTCGCTCTAT TERM 434 396166 - 396180 + G 71 -3.4 -4.82901 | overlap 396167 TGGTGCCGCTCATTC TGCTCG TTG CGGGCC TTTTTGTCAGGGAAG TERM 435 396343 - 396357 + G 71 -2.8 -4.77986 | TTTTGTTCGTGTGTG TATGGG CGG CCGATA TTTTTGCATATTTCG TERM 436 396371 - 396382 + G 70 -7.2 -4.0896 | TATTTTTGCATATTT CGGC GGTA GCCG TTTTGGAGGGCGTTT TERM 437 396466 - 396517 + G 83 -5.8 -5.01732 | gap 1, overlap 396477 TTGTTGCAGGACTGG CCGGAAG-CGTGGCCGTTGCGGCAA TTT TTGCCGCAACAGATATGGCATTAGG TTTTTTGCCGGCGTT Paes_0360 395868 - 396713 + | phosphatidate cytidylyltransferase Paes_0361 396969 - 397439 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Paes_0362 397468 - 398736 + | histidyl-tRNA synthetase Paes_0363 398770 - 399039 + | glutaredoxin 2 TERM 438 399100 - 399126 + G 91 -2.9 -5.58454 | TATCTGATGATACGT CTGCTCCTGAA TTCGT TGCGGGAGAAG TTTTTTTCGTCTACG Paes_0364 399052 - 399231 + | hypothetical protein TERM 439 399321 - 399335 + F 100 -7.8 -5.80951 | opp_overlap 399321 GATTTATTCGTGAAA GTGGGT ACA GCCCAC TTTTTTGTTTTGCCT TERM 440 399498 - 399544 + G 87 -4.5 -5.29445 | gap 1, overlap 399490 399500 AGGAATTGAAGCGTG TGTTGCTTCCTTTTCCCG-GGA AGTC TCAACGGGAAAAGAGAGCGAGA TTTTTCTTGTTGACC Paes_0365 399460 - 399999 + | protein of unknown function DUF150 TERM 441 400768 - 400795 + G 70 -4.1 -4.61199 | opp_overlap 400769, overlap 400769 CTGACGGAGGCATGA AGGTCATCGTT TCGCGT ACCGATGACCG TTTTCTCTATAAACT TERM 442 401454 - 401425 - g 71 -2.2 -4.94992 | GCAAAGGCAGAAAAA CAGTCAAGCC-GAG AGAG CGCAGGCTT-ACTG ACGAAGAGAAGAGGT Paes_0366 400056 - 401609 + | NusA antitermination factor TERM 443 401862 - 401846 - g 81 -4.4 -5.1675 | overlap 401861 TCAGCGATGAAAAAA GGCTTG TCGAC CAAACC CGCAAAATTCGCGAG TERM 444 401898 - 401884 - g 95 -10 -4.7254 | opp_overlap 401888 ATTCGCGAGGAAAAA CGTCAG CGT CTGACG CGTCTTGAAGAGCAG TERM 445 403553 - 403571 + G 78 -8.1 -4.38712 | AGGGCGTTATCTCTA CCGTGCT TGTCC AGCGCGG TTTTCTCAAAGTCGG Paes_0367 401665 - 404475 + | translation initiation factor IF-2 Paes_0368 404489 - 404857 + | ribosome-binding factor A Paes_0369 404857 - 405600 + | tRNA pseudouridine synthase B Paes_0370 405606 - 406571 + | riboflavin biosynthesis protein RibF Paes_0371 406617 - 406886 + | ribosomal protein S15 TERM 446 406913 - 406944 + F 72 -8.6 -3.61894 | overlap 406914 406917 AAGCACTTGTTCGTC TGATTCCCGTAGGG CCTG CCCTGCGGGATGCG TTATTGGCAGGACTT TERM 447 406917 - 406940 + F 89 -14.6 -2.6563 | overlap 406914 406913 ACTTGTTCGTCTGAT TCCCGTAGGG CCTG CCCTGCGGGA TGCGTTATTGGCAGG Paes_0372 406987 - 407862 + | domain of unknown function DUF1732 Paes_0373 407868 - 408452 + | Guanylate kinase Paes_0374 408475 - 408828 + | hypothetical protein TERM 448 408992 - 408976 - g 73 -11.5 -2.76261 | overlap 408975 TGTCAAGGCTGAAAC CCCCGGG GTT CCCGAGG CGCGAGATATCAGAG Paes_0375 408809 - 409303 + | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 449 409412 - 409455 + G 81 -7.1 -4.66833 | gap 3, opp_overlap 409423 GGGTATCAATGCATG CCTCAAAACC--A-TCGTTACA CAG TGTGACGAATACGGTTTTGAGG TTTTTGGCATTAAAC TERM 450 410505 - 410519 + G 74 -2.1 -5.0916 | gap 1, overlap 410506 AAGATGCGCTGTGTT C-TCGG CAAG CCGATG TTTTTCTATTAAGCG TERM 451 410506 - 410517 + G 70 -5.8 -4.17211 | overlap 410505 AGATGCGCTGTGTTC TCGG CAAG CCGA TGTTTTTCTATTAAG Paes_0376 409359 - 410531 + | 6-phosphofructokinase TERM 452 410918 - 410941 + G 81 -6.6 -4.61747 | overlap 410920 ATCGACCGTTCGCTT GACGTCGATG AGGA CAGCGACGAC TTTTCTCCTTCTTCG Paes_0377 410639 - 410974 + | hypothetical protein TERM 453 410963 - 410980 + T 75 -9.1 -3.67597 | gap 1 CCTTCTTCGATCAGC CCGCTCGC ATA GCG-GCGG TTATTGCCTGCCGGA Paes_0378 411718 - 410981 - | Nucleotidyl transferase Paes_0379 412174 - 411785 - | aspartate 1-decarboxylase Paes_0380 412648 - 412190 - | protein of unknown function DUF1239 TERM 454 412379 - 412397 + g 75 -11.8 -3.07816 | CACGGTCCTATCCGC CGATGTCA GGA TGACATCG TTAAATGCCTCAAGG Paes_0381 413328 - 412774 - | outer membrane chaperone Skp (OmpH) Paes_0382 414806 - 413658 - | DNA protecting protein DprA TERM 455 414687 - 414710 + g 77 -8.9 -4.09805 | gap 1 AAGAACGTTCGACGG GCTC-CCTGC CTGTT GCAGGAGAGC TTTGATTCTTGCTGG Paes_0383 415844 - 414831 - | Polyprenyl synthetase Paes_0384 416910 - 415837 - | isopentenyl-diphosphate delta-isomerase, type 2 Paes_0385 417130 - 418398 + | protein of unknown function DUF214 Paes_0386 418567 - 419985 + | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I TERM 456 421315 - 421342 + G 72 -9.8 -3.27475 | opp_overlap 421322, overlap 421314 ATATAACGTCCATTC CCGAACATTCGC TCAG GCGACTGATCGG TGTTGTGATGCAGGA TERM 457 421502 - 421549 + G 78 -7.6 -4.42653 | opp_overlap 421476 421511, overlap 421503 421539 421543 ATACGACTACCGGGT TCGGGAAAATGGTTCCGGCCTG TCAG CAGGCCAGAAGCAGTTGCTCGC TTTTGTGCGTGCGCT TERM 458 421503 - 421548 + G 74 -11.1 -3.2511 | opp_overlap 421476 421511, overlap 421502 421539 421543 TACGACTACCGGGTT CGGGAAAATGGTTCCGGCCTG TCAG CAGGCCAGAAGCAGTTGCTCG CTTTTGTGCGTGCGC TERM 459 421540 - 421511 - g 100 -12.9 -4.07568 | opp_overlap 421503 421502 421539, overlap 421476 CCGGGTTCGGGAAAA TGGTTCCGGCCTG TCAG CAGGCCAGAAGCA GTTGCTCGCTTTTGT TERM 460 421856 - 421831 - g 74 -2.5 -5.03715 | gap 1, overlap 421832 421835 AGCATCCGGAAAAAA TCCATGAGTCCC CCG GGG-CTCAGGCA TAAGCGTATTCGTTA Paes_0387 420024 - 421859 + | ABC transporter related Paes_0388 422001 - 422276 + | ribosomal protein S20 TERM 461 422452 - 422470 + G 72 -7.4 -3.88232 | GCCATTGTCGATGTT GGCGGTGT TGC ATACCGTC TTCTTATATCCAACA Paes_0389 422389 - 422991 + | Holliday junction DNA helicase RuvA TERM 462 423084 - 423061 - g 74 -11 -3.14132 | TCGTTTTGGTATGAA GCCAGGACTC GAGC GAGTCCTGGA ACTGCTCAGGAGTGT Paes_0390 423005 - 424273 + | FolC bifunctional protein TERM 463 424355 - 424377 + F 72 -8.4 -3.65812 | overlap 424358 424360 TTCAAATTCCTTACT TCACGCCCGT GAT ACGGGTGTCA TTCTATTGAGCAGAC TERM 464 424358 - 424374 + F 72 -10.1 -2.94293 | overlap 424355 424360 AAATTCCTTACTTCA CGCCCGT GAT ACGGGTG TCATTCTATTGAGCA Paes_0391 424595 - 425884 + | transcription termination factor Rho TERM 465 426092 - 426078 - f 100 -4.2 -5.66926 | GGAAAAAAAAGAAAA CGTCAT AAG ATGGCG GTGCACAAGCGCAAG TERM 466 426414 - 426428 + F 100 -8.5 -5.76633 | ACATGCATATCGGAA GCCGC ACTAA GCGGC TTTTTTTATGTCTCG Paes_0392 426436 - 427008 + | Tripartite ATP-independent periplasmic transporter DctQ component TERM 467 427103 - 427130 + G 79 -4.1 -5.06451 | GGGTGTTTCAGTCAT CTTCGGCCT TTTGATCTTT GGGCCGGAG TTTTTTGCCCTGCTG Paes_0393 427005 - 428327 + | TRAP dicarboxylate transporter, DctM subunit Paes_0394 429526 - 428387 - | TRAP dicarboxylate transporter- DctP subunit TERM 468 429896 - 429910 + G 77 -10 -3.58343 | overlap 429895 CGGGTAGCGGCCATG CGCAAG GCG CTTGCG TTTGGCGCTGATGAA TERM 469 430239 - 430226 - g 75 -5.2 -4.59853 | GTAACCGCTGAAAAA GGGC TGAACC GCCC CCGTAAAACCGGTGT Paes_0395 429686 - 430441 + | Electron transfer flavoprotein alpha/beta-subunit TERM 470 430829 - 430840 + G 81 -5.8 -4.7373 | TCTTGCCGGTGATGA GCCT ATCA AGGC TTTTTCATCCGATGA Paes_0396 430680 - 431666 + | Electron transfer flavoprotein alpha subunit TERM 471 432205 - 432195 - g 72 -6.8 -4.22591 | AAGAAGCTGAAGAAA TGGC TTC GCCA CCACCAACCGCCACA Paes_0397 431738 - 432340 + | protein of unknown function DUF151 TERM 472 432388 - 432406 + T 100 -6.7 -5.75342 | opp_overlap 432385 432400 432401 ATGCATATAAATTTT GAGATCC ACAAA GGGTCTC TTTTTTTTGCAAAAA TERM 473 432446 - 432425 - T 100 -11.6 -5.75342 | opp_overlap 432429, overlap 432401 432400 432437 TTTTTGCAAAAAAAA GGGAGACC ACAATG GGTCTCCC TTAACAGTACGCCTT Paes_0398 433193 - 432480 - | surface antigen msp4 family protein TERM 474 433351 - 433320 - R 89 -8.8 -4.72272 | gap 1, opp_overlap 433325, overlap 433325 CTTTCCGACTAAAAA GAAAAGGCGACC-CT GGA AGAGGCCGCCTTTTT GTCTTCTATGCAGGT TERM 475 433346 - 433325 - R 95 -8.7 -5.3104 | gap 1, opp_overlap 433325, overlap 433320 CGACTAAAAAGAAAA GGCGACC-CT GGA AGAGGCCGCC TTTTTGTCTTCTATG TERM 476 433325 - 433346 + r 87 -6.5 -5.1764 | gap 1, opp_overlap 433325 433320 CGACTAAAAAGAAAA GGCGACC-CT GGA AGAGGCCGCC TTTTTGTCTTCTATG Paes_0399 434081 - 433377 - | hypothetical protein TERM 477 434124 - 434145 + r 70 -5.9 -4.32951 | gap 1, opp_overlap 434124, overlap 434120 AGTGAGTGATAGATA GCAAAGCAGG ATT TC-GCTTTGC TTTCTTCGTTAAGAT Paes_0400 436699 - 434216 - | outer membrane protein assembly complex, YaeT protein TERM 478 434457 - 434443 - G 76 -4.2 -4.88228 | overlap 434430 ATGCAAGAGCAAAAA CACTTG CTG CAGGTG AAAGCGTGAGCGGAT Paes_0401 437529 - 436711 - | undecaprenyl diphosphate synthase TERM 479 437876 - 437895 + G 79 -2.2 -5.31275 | CGAAGCGACCCGTGA CAGAAA CATTTACA TTTCTG TTTTTTATGATGAAG TERM 480 437942 - 437970 + G 72 -6.8 -4.24204 | gap 2, overlap 437930 ATCGCTTGACCGTAA GCTTGATGCCGGCG AAA CGCCGG-GT-AAGC TTTTCGGTATGCCTA Paes_0402 437769 - 439202 + | glutamyl-tRNA(Gln) amidotransferase, A subunit Paes_0403 439239 - 440141 + | succinyl-CoA synthetase, alpha subunit TERM 481 440163 - 440195 + T 78 -10.7 -3.1505 | gap 1, opp_overlap 440170, overlap 440170 AAAACCTTTCTGACG TGCAGAA-CCCCCT TCATAC AGGGGGTTTCTGCG TTGGTGGAGAATGGT TERM 482 440170 - 440187 + T 76 -8.4 -3.98826 | opp_overlap 440170, overlap 440163 TTCTGACGTGCAGAA CCCCCT TCATAC AGGGGG TTTCTGCGTTGGTGG Paes_0404 441783 - 440812 - | KpsF/GutQ family protein TERM 483 441717 - 441746 + g 72 -7.2 -4.18018 | gap 1, overlap 441721 GTCCTGCTATGTTTT CGATTGCTGCGGC TTCTT GCCGCAG-AATGG TTTTGGCTGAAGAGA TERM 484 442221 - 442200 - g 83 -6.5 -4.90906 | gap 1, overlap 442212 442213 GGACAAGATTAAAAA GCCGGACGAC AAG GTGG-CCGGC AACGGCAACGCATCG Paes_0405 441913 - 442254 + | hypothetical protein TERM 485 442508 - 442529 + G 70 -4.3 -4.57341 | opp_overlap 442512, overlap 442510 CCGAAGCACTTCGTC AAGAGGGAG GCAG CTCCCGCTA TTTTTCAACAGCATT Paes_0406 442279 - 443772 + | polysaccharide biosynthesis protein Paes_0407 444444 - 443890 - | hypothetical protein Paes_0408 445083 - 444724 - | hypothetical protein TERM 486 445081 - 445092 + g 77 -3 -5.15167 | overlap 445077 ATCCCTTTTCTGCAT CATA ATGC TATG TTTTTGTTGATCGTA Paes_0409 445770 - 445153 - | RNA polymerase, sigma-24 subunit, ECF subfamily Paes_0410 446668 - 445874 - | Methyltransferase type 11 TERM 487 446009 - 446021 + g 75 -4.7 -4.84359 | CATCATGTCTTCCAC CGGAC TTC GACCG TTTTTCTGCCGGTAG Paes_0411 448067 - 446685 - | Phosphomannomutase TERM 488 447333 - 447362 + g 72 -8.5 -3.75653 | overlap 447332 447329 447332 CATGCCCACTCTGTC GGCATCGCCGTCG TTGA TGATGGCGACGTC TGTTTTGACTTCCTT TERM 489 448610 - 448627 + GH 79 -3.5 -5.03715 | CGCCTGCTTGTGATT TTCAATT TTGA AGTTGAA TTTTTTGCCCGTCAT TERM 490 448808 - 448784 - gH 72 -5.7 -4.46212 | CCGGGCAGCAGAAAA CAGGAGATTTC GCT GATATATCCTG AAATGCTTGAGGCAG TERM 491 449236 - 449277 + GH 90 -12.3 -3.2794 | gap 1, opp_overlap 449238 449239, overlap 449238 449239 TCTTCGCCGTGAGGA AATGCGAGCTGCGCTGCTTG ATG CCAG-AGCGCAGCTCGCCTC TTCATCTCCGTCGCA TERM 492 449238 - 449275 + GH 95 -14.9 -3.20573 | gap 1, opp_overlap 449238 449239, overlap 449236 449239 TTCGCCGTGAGGAAA TGCGAGCTGCGCTGCTTG ATG CCAG-AGCGCAGCTCGCC TCTTCATCTCCGTCG TERM 493 449275 - 449238 - gH 100 -14.9 -3.72576 | gap 1, opp_overlap 449238 449236 449239, overlap 449239 TTCGCCGTGAGGAAA TGCGAGCTGCGCTGCTTG ATG CCAG-AGCGCAGCTCGCC TCTTCATCTCCGTCG TERM 494 449239 - 449274 + GH 100 -18.4 -2.52023 | gap 1, opp_overlap 449238 449239, overlap 449238 449236 TCGCCGTGAGGAAAT GCGAGCTGCGCTGCTTG ATG CCAG-AGCGCAGCTCGC CTCTTCATCTCCGTC TERM 495 449274 - 449239 - gH 100 -18.4 -2.83403 | gap 1, opp_overlap 449239 449238 449236, overlap 449238 TCGCCGTGAGGAAAT GCGAGCTGCGCTGCTTG ATG CCAG-AGCGCAGCTCGC CTCTTCATCTCCGTC Paes_0412 448160 - 449368 + | lipid-A-disaccharide synthase TERM 496 449527 - 449540 + GF 74 -3.1 -5.00884 | CATCACAAAGTGTTC TGGCT CTTG AGTCA TTTTTTCGGGAAGGT Paes_0413 449340 - 449597 + | hypothetical protein TERM 497 450310 - 450332 + G 78 -7.6 -4.3739 | CAGACTTTTCAGCAT GCCGTAACGG CTG TCGATGCGGC TTTTATAGCGCAATC TERM 498 450397 - 450387 - g 82 -2.4 -5.42259 | TGAGGTTGAAAAAAA CGGG CTG CTCG TCATGGAGTTTTCTC Paes_0414 449758 - 450555 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Paes_0415 450552 - 451004 + | TOBE domain protein Paes_0416 451004 - 451684 + | molybdate ABC transporter, inner membrane subunit TERM 499 451799 - 451811 + G 77 -3.3 -5.06103 | overlap 451787 CCGGCCCTTCCGGTA GCGGT AAA ACCAC TTTTTTGCGGCTTCT TERM 500 452118 - 452104 - g 73 -11.4 -2.57132 | overlap 452103 452106 TCGGGGGGGCAGAAG CAGCGC GTT GCGCTG GCACGGGCACTGATG TERM 501 452563 - 452529 - g 82 -9.3 -4.1822 | CGTTATCGGAACAAA GGCGTTCAATCCTAC CATTC GCAGGTTTGAAAGCC GGGAGTTTGATTTTT Paes_0417 451684 - 452589 + | ABC transporter related Paes_0418 454614 - 452653 - | ferredoxin TERM 502 453232 - 453255 + g 75 -5.2 -4.64598 | TTCTGTCATGCATGT GGCACTGTCG GTCT TGAAGGTGCC TTTTTGCGATAGTTG TERM 503 454012 - 454029 + g 74 -2.5 -5.08824 | overlap 454014 AAGGCCTGCAGGGCC GGCTCCG ATGA CGGCGAC TTTTTTGCCTGACGC Paes_0419 455647 - 454670 - | hydroxymethylbutenyl pyrophosphate reductase Paes_0420 456215 - 455817 - | hypothetical protein TERM 504 456108 - 456124 + g 76 -7.9 -4.1964 | overlap 456111 456112 CTGCAAGTCATCCTT CAGGCGC GAC GCGCGTG TTTTCAGCTGTTGGC Paes_0421 456597 - 456199 - | hypothetical protein TERM 505 456553 - 456565 + g 100 -10.5 -5.38839 | overlap 456531 GCCGGGCTCATCCCT GCCGG TTG CCGGC TTTTGTTTTTCTCTG Paes_0422 456882 - 456613 - | hypothetical protein TERM 506 456662 - 456648 - GR 74 -7.8 -4.0911 | TAAAACCAAGAACAA CGCCTG CGC CAAGCG AGTACAGCACGGATT Paes_0423 456985 - 456857 - | hypothetical protein Paes_0424 457748 - 457005 - | short-chain dehydrogenase/reductase SDR TERM 507 458048 - 458074 + G 70 -5 -4.46112 | ACCATTATTCCCGGT CTCTCGCTTGAG ATT CGCGAGGGGGAG TTTCTTTCCATCACA Paes_0425 457964 - 458668 + | ABC transporter related Paes_0426 458761 - 460299 + | hypothetical protein Paes_0427 460317 - 462344 + | DNA ligase, NAD-dependent Paes_0428 462439 - 463080 + | hypothetical protein TERM 508 463146 - 463193 + T 91 -6.9 -5.45726 | opp_overlap 463146 463149 463154, overlap 463149 463156 TTTGCCATGTGAGAA TCAGCCAAGCCCGGACGGGCT GCGGTG AGCCTGTCCGGTTTCAGCTTA TTTTTTTGCGATATA TERM 509 463149 - 463190 + T 89 -8.6 -4.80853 | opp_overlap 463146 463149 463154, overlap 463146 463156 GCCATGTGAGAATCA GCCAAGCCCGGACGGGCT GCGGTG AGCCTGTCCGGTTTCAGC TTATTTTTTTGCGAT TERM 510 463156 - 463183 + T 100 -14.9 -3.76749 | opp_overlap 463154 463149 463146, overlap 463149 463146 GAGAATCAGCCAAGC CCGGACGGGCT GCGGTG AGCCTGTCCGG TTTCAGCTTATTTTT Paes_0429 463940 - 463191 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 511 463593 - 463604 + g 100 -3 -5.75945 | opp_overlap 463593 GCCTTGTACAAAACG TATC TGCG GATA TTTTTTTTCCGCAAT Paes_0430 464337 - 463924 - | Phosphoribosyl-AMP cyclohydrolase TERM 512 464151 - 464175 + g 84 -4.1 -5.20328 | overlap 464137 464158 464159 TCAGCCAGAGTTTCT GACGGCTTCTG CTC CAGTAGCAGGC TTTCTTTTTTTCCAG Paes_0431 464473 - 465579 + | efflux transporter, RND family, MFP subunit Paes_0432 465795 - 466700 + | Auxin Efflux Carrier TERM 513 467374 - 467393 + G 74 -2.8 -4.88736 | overlap 467376 TACCGGATCGATTAT TTCCGTGA AGTC TTACGGTA TTTTTCTCAGTAATC Paes_0433 466754 - 467638 + | protein of unknown function DUF88 TERM 514 467637 - 467623 - f 71 -4.2 -4.82901 | TTTCCTGCAGAAAAA CAGTGC AAA GAACTG ATCCGGCCTGGCGGA TERM 515 467692 - 467712 + F 71 -4.6 -4.63486 | GATGAAGTAGTTCTT CAGCGCCG CTTCA TGGGGCTG TTTTCTTACCGGGGT TERM 516 467873 - 467883 + G 82 -3.2 -5.30189 | AATATTGTCGTTCAA CCTT TTT GAGG TTTTTTGCTGTTGTG Paes_0434 467845 - 468543 + | hypothetical protein Paes_0435 468557 - 469012 + | protein of unknown function DUF1499 TERM 517 469008 - 468993 - T 77 -4.6 -5.15634 | overlap 468995 GACTGGACGAAAAAA GCGGCA AGGT TGCCCC TTAAGAGGATTGATT TERM 518 469063 - 469035 - T 76 -10.4 -3.40371 | GATTGGAGGAACGAA TGTCCAGAGG TTATGATCT CCTCTGGACA GCCGTTAGAGTAGGA Paes_0436 470540 - 469092 - | glutamate synthase (NADPH), homotetrameric TERM 519 470318 - 470304 - G 77 -11.4 -3.14132 | opp_overlap 470285 CGCGGCGCCGAGGAA GTCGCC TTC GGCGAC CAGGTGAATAAATTC Paes_0437 471473 - 470628 - | oxidoreductase FAD/NAD(P)-binding domain protein TERM 520 471231 - 471245 + g 76 -4.2 -4.90013 | overlap 471222 TACGATGTCGTTGAT CGAGTC ACC GGCTTG TTTTTCGTTGAGTTC TERM 521 471567 - 471535 - H 77 -6.6 -4.57073 | CAGGTGGGCCAAAAA TTTTATAATACTTA ATATA TAAGTAATATAAAA ATGAAACGTCATCCC TERM 522 471596 - 471569 - H 100 -10.8 -5.1485 | gap 1, opp_overlap 471574 471581, overlap 471574 TAAGTAATATAAAAA TG-AAACGTCATC CCG GATGACGTTTGCA AGCGTCGTCCGGTTT TERM 523 471590 - 471574 - H 90 -10.9 -4.41882 | opp_overlap 471574 471581, overlap 471569 AATATAAAAATGAAA CGTCATC CCG GATGACG TTTGCAAGCGTCGTC TERM 524 471574 - 471590 + H 81 -10.9 -3.54741 | opp_overlap 471574 471569, overlap 471581 AATATAAAAATGAAA CGTCATC CCG GATGACG TTTGCAAGCGTCGTC TERM 525 471581 - 471608 + H 100 -14.2 -4.12198 | opp_overlap 471574 471569, overlap 471574 471603 AAATGAAACGTCATC CCGGATGACGTT TGCA AGCGTCGTCCGG TTTTCCAGGCTTCTG TERM 526 472033 - 472047 + G 70 -3.5 -4.61231 | gap 1, overlap 472046 ACTCTGTCGATTACT GC-CGC GATA GCGAGC TTTTTCGGGGTATAC Paes_0438 471657 - 472262 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 527 472814 - 472837 + G 70 -11 -2.75844 | overlap 472813 CGGCATGATGCAGGG CGTCGGCTAC GAGA GTACCCGACG ATTTGCCATGAAAGC Paes_0439 472284 - 473069 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 528 473101 - 473122 + F 100 -10.9 -5.52384 | gap 1, opp_overlap 473099 473104 TCCTGCAAAGGTATA GAAGCCCTCG AAC CG-GGGCTTC TTTTTTTGCTGCCGC Paes_0440 473167 - 473787 + | segregation and condensation protein B Paes_0441 473765 - 474511 + | pseudouridine synthase TERM 529 474713 - 474723 + G 86 -6.8 -4.87892 | TGATGTTGAAGCACT GCTC GAA GAGC TTTCTTTTCTTCAAG TERM 530 476467 - 476457 - g 81 -6.8 -4.72272 | GCGCGCTACGAAAAA GCGT GGT ACGC CAATCGTGACGTCTA Paes_0442 474552 - 476555 + | hypothetical protein Paes_0443 477531 - 476593 - | hypothetical protein TERM 531 477572 - 477611 + r 79 -8.1 -4.3078 | opp_overlap 477580 477594, overlap 477607 CAAGCTTCTAACGCT GCTAA-TCAGCCGACGC AAAATACC GC-TCGGCTGAATTAGC TTTGTTAATGTGGTT Paes_0444 477779 - 477633 - | hypothetical protein TERM 532 478000 - 477979 - R 71 -5.2 -4.45077 | TAAAAATTATCAAAA TCACCTTC TATTTC GAAAGTGA CCTCACCACAAAGGC Paes_0445 478300 - 478205 - | hypothetical protein Paes_0446 478857 - 478378 - | hypothetical protein TERM 533 478556 - 478579 + g 83 -5.2 -5.14563 | opp_overlap 478561, overlap 478557 ATCGAGCTGGCGGGA TGAGACCTGC TATC GCGGGTATCG TTTTTTCGTGAAAAA TERM 534 479807 - 479823 + H 71 -9.5 -3.05046 | opp_overlap 479809 479813, overlap 479806 479809 TAAAATTGTCTTATA CAGAAAG CCG CTTTCTG CTTTTCCAGAAATAG Paes_0448 479882 - 480382 + | hypothetical protein TERM 535 480393 - 480441 + F 80 -8.5 -4.27316 | opp_overlap 480411 CCTAACCCGTCAGTC GAGAGGGACCCTACGCAAGCGGC GTT GCCGCTCGCTCCGCGCCCCTCAC TTTTACGTTGGGCGG TERM 536 480423 - 480411 - f 73 -10.5 -3.06915 | opp_overlap 480393 AGGGACCCTACGCAA GCGGC GTT GCCGC TCGCTCCGCGCCCCT Paes_0449 480469 - 481221 + | restriction endonuclease TERM 537 481345 - 481313 - f 80 -10.6 -3.29461 | gap 2, overlap 481301 481316 481325 CAAGCGGCTCGAGAA CGACCGCCCAAAGCGC TAC GCGCTCCGG-CGG-CG TCCCAGCCTAGCCGT TERM 538 481343 - 481316 - f 79 -12 -2.82623 | gap 1, overlap 481301 481313 481325 GCGGCTCGAGAACGA CCGCCCAAAGCGC TAC GCGCTCCGG-CGG CGTCCCAGCCTAGCC TERM 539 481635 - 481672 + G 70 -10 -3.21099 | opp_overlap 481635 481633 481639, overlap 481639 CAGAATTTAACAATA TTAATGCAGATGGCCA TAACAT TGGTCGTCTGCATCAA TTGATCGTGGGGCCA Paes_0450 481418 - 484051 + | SMC domain protein TERM 540 484111 - 484070 - f 72 -8.2 -3.91332 | gap 3, opp_overlap 484079 484081, overlap 484076 484079 AGTAGCACATAACAA GTCAAAGCACTCGGGCGCAGC AAA GCTGCGC-CG-GTG-TTTGAG GCGTTAGGCGTTGGC TERM 541 484106 - 484076 - f 76 -8.3 -3.88178 | gap 2, opp_overlap 484079 484081, overlap 484070 484079 ACATAACAAGTCAAA GCACTCGGGCGCAGC AAA GCTGCGC-CG-GTGT TTGAGGCGTTAGGCG TERM 542 484079 - 484105 + F 100 -13.6 -3.57561 | opp_overlap 484076 484070 484079, overlap 484081 TAACAAGTCAAAGCA CTCGGGCGCAGC AAA GCTGCGCCGGTG TTTGAGGCGTTAGGC TERM 543 484105 - 484079 - f 87 -13.6 -2.99849 | opp_overlap 484079 484081, overlap 484076 484070 TAACAAGTCAAAGCA CTCGGGCGCAGC AAA GCTGCGCCGGTG TTTGAGGCGTTAGGC TERM 544 484081 - 484103 + F 100 -14.8 -3.36569 | opp_overlap 484079 484076 484070, overlap 484079 ACAAGTCAAAGCACT CGGGCGCAGC AAA GCTGCGCCGG TGTTTGAGGCGTTAG Paes_0451 484239 - 484460 + | transposase IS3/IS911 family protein TERM 545 484498 - 484548 + T 100 -23.6 -2.90392 | opp_overlap 484528, overlap 484504 TGCGTTTGTCTGTTG GTCGAACCCTTGCGGGGTATATTT GCA AAATATACCCCGCAAGGGTATAAC TGTGGTTGCCCGGTG TERM 546 484546 - 484528 - T 74 -8.2 -4.13014 | opp_overlap 484498 GGTATATTTGCAAAA TATACCCC GCA AGGGTATA ACTGTGGTTGCCCGG Paes_0452 485522 - 484572 - | Sua5/YciO/YrdC/YwlC family protein TERM 547 484955 - 484976 + g 72 -10.8 -3.05596 | CGAGGCTGATGGCGC CCGCCCTG AGCAGC CGGGGCGG TTCGGTCGCGCAGTC TERM 548 485104 - 485158 + g 72 -9.8 -3.29511 | overlap 485120 GAACTCGGTTTGCCC GACAGGTTCGCCGAGGGTGCGGCCAC AGG GTGGCGGCACTCTCTGAGGAACGCTC TTGTGACGGGATGCC TERM 549 485120 - 485142 + g 82 -13.4 -2.87211 | overlap 485104 ACAGGTTCGCCGAGG GTGCGGCCAC AGG GTGGCGGCAC TCTCTGAGGAACGCT Paes_0453 486212 - 485541 - | phosphatidate cytidylyltransferase TERM 550 486273 - 486263 - H 78 -5.4 -4.96848 | overlap 486268 GTGTTCACATAAAAA CAAG GCT CTTG CGGTATGCAAGATAC TERM 551 487207 - 487217 + G 75 -6.8 -4.37886 | GCTCAGAATATAGCG CGGA TGA TCCG TTTTCTGACCGGTCG TERM 552 487964 - 487982 + G 74 -3.2 -4.9792 | opp_overlap 487964 CAATCCATGCGGAAA TTGATC GTGAACA GATCAA TTTTTGTCTGGAGTC Paes_0454 486538 - 488103 + | Ppx/GppA phosphatase TERM 553 489620 - 489643 + G 76 -7.4 -4.2717 | overlap 489621 TCTCTATGACCGGAT TTTGCGGCAG GCTG CTGCTGCAGG TTTTGATGAGGTGCT TERM 554 489842 - 489854 + G 72 -6.9 -4.17417 | GGAAGATCTTCTTTC GGCCG ATG CGGTC TTTGTCTGTAATTCA Paes_0455 488100 - 489956 + | para-aminobenzoate synthase, subunit I Paes_0456 490011 - 490457 + | hypothetical protein Paes_0457 491183 - 490548 - | endonuclease III Paes_0458 491886 - 491194 - | metallophosphoesterase Paes_0459 492416 - 491910 - | NusB antitermination factor Paes_0460 493128 - 492436 - | Haloacid dehalogenase domain protein hydrolase Paes_0461 496678 - 493118 - | chromosome segregation protein SMC TERM 555 493427 - 493391 - G 70 -5.8 -4.24606 | AAGGTAGATGGAAAA CAGCAGGGATAAAGCG GTCAG CGCTTTTTCTCCACCG CTGAGCTGCTCAATG TERM 556 493433 - 493450 + g 90 -4.8 -5.42259 | TTCTCCACCGCTGAG CTGCTC AATGGA GAGCGG TTTTTTTCCCCGTGG TERM 557 494401 - 494413 + g 70 -4.1 -4.65747 | overlap 494396 AGGTGAGCTCCTGCT CTGTA GTT TGCAG TTTTCTTCGGGCTTC TERM 558 494973 - 495004 + g 74 -8 -4.00486 | gap 1, overlap 494990 ATTTTGCCTTTATCT GCTCTGGTGAGGCAT TCG ATGCCT-GCCCGGGC TTCTTGTGTTGTGGC TERM 559 496452 - 496465 + g 74 -3.1 -4.91987 | GAGACTTCGGAAAGG CTCAG CGGC TTGAG TTTTCTTGTTCCGTT Paes_0462 497661 - 496786 - | dihydropteroate synthase TERM 560 497233 - 497244 + g 71 -2.2 -5.0133 | GTGCATGAGAATGAC TGCC GCCT GGTA TTTTTTGCAGACATC TERM 561 497580 - 497592 + g 74 -3.3 -5.0133 | opp_overlap 497579 497580 TCGTATTCAGAATAC CCATG ACG CAGGG TTTTTTACGGAAATC Paes_0463 498710 - 497682 - | peptidase M50 TERM 562 498745 - 498794 + r 83 -5.8 -5.28166 | gap 3, opp_overlap 498754, overlap 498747 498749 498753 498756 TGTGTCTGCTGCTAT CG-GTG-AAAACAGCGGGGGAGAAG CTT CTT-TCCCCCGCTGATATGCTCTCG TTTTTATTCCTTTTC TERM 563 498753 - 498784 + r 87 -13.8 -2.92398 | gap 1, opp_overlap 498754, overlap 498749 498747 498745 498756 CTGCTATCGGTGAAA ACAGCGGGGGAGAAG CTT CTT-TCCCCCGCTGA TATGCTCTCGTTTTT TERM 564 498783 - 498754 - R 100 -17.3 -4.09685 | gap 1, opp_overlap 498753 498749 498747 498745 498756 TGCTATCGGTGAAAA CAGCGGGGGAGAAG CTT CTT-TCCCCCGCTG ATATGCTCTCGTTTT TERM 565 498756 - 498781 + r 87 -14.1 -2.69178 | gap 1, opp_overlap 498754, overlap 498753 498749 498747 498745 CTATCGGTGAAAACA GCGGGGGAGAAG CTT CTT-TCCCCCGC TGATATGCTCTCGTT Paes_0464 499253 - 498798 - | cytochrome c, putative TERM 566 498936 - 498921 - G 77 -3.2 -5.04325 | overlap 498915 GGGAAAGTAGAAAAA CGGG GGCATTTT CCCG CTCCGTACTTCTTCG Paes_0465 500341 - 499379 - | methyltransferase type 12 TERM 567 499491 - 499523 + g 100 -2.1 -5.78622 | gap 1 GCTTCGCTGTAAAAT TTTCGTGC-TGAAG TGTAGC CGTCAAGCATGAAA TTTTTTTTACCCTGA TERM 568 499613 - 499626 + g 79 -3.7 -5.1101 | opp_overlap 499611, overlap 499612 CAGGAAAAACGATGC GCCCC ACGA GCGGC TTTTTTCGATCATGA TERM 569 500254 - 500265 + g 70 -5.8 -4.27316 | overlap 500250 TGTTACAGAGCGCTT CAGC AGAA GCTG TTTTCAGTTGAAGCA Paes_0466 500971 - 502599 + | hybrid cluster protein TERM 570 502588 - 502614 + T 100 -13 -4.57341 | overlap 502590 GTGCTTGCGATGATG GCCGGTCAGTGA CTT TCACTGGCCGTC TTTTTGCAGGGGGTT TERM 571 502590 - 502612 + T 100 -14.2 -3.90048 | overlap 502588 GCTTGCGATGATGGC CGGTCAGTGA CTT TCACTGGCCG TCTTTTTGCAGGGGG Paes_0467 502785 - 502603 - | hypothetical protein TERM 572 502777 - 502719 - G 100 -21.9 -2.79273 | gap 1, overlap 502718 502768 TTTTGTCAACACAAT GCTGTCCTGGCTCAGTGTTCTGACGGGG GAGA CCTC-TCAGGGCACTGAACCAGGACAGC CCGGGCATACCACGT TERM 573 503037 - 503022 - g 72 -7.6 -3.92373 | GACGGGATGGAGAAA CTGCTT CAGG AAGCAG AGCATGCCAATGGGC Paes_0468 502794 - 503411 + | NADPH-dependent FMN reductase Paes_0469 503491 - 504453 + | hypothetical protein Paes_0470 504504 - 504866 + | transcriptional regulator, ArsR family TERM 574 505909 - 505936 + G 70 -6.2 -4.15044 | AGCCGATGGCTTGTC GGGCAGCAGGCT CATG AGCCTGGTATCC TTTCTTCGGGGGCAG TERM 575 505962 - 505983 + G 95 -10.9 -4.56597 | GGCAGCAATGCTGCT GCTTGCACT GATA GGTGCAAGC TTTTTCGACAGGAAA Paes_0471 504934 - 506007 + | permease TERM 576 506194 - 506183 - g 79 -2.2 -5.26875 | opp_overlap 506190 TCGTTAATGAAAAAA TCCC GTTC AGGA GCGATAATCTTCTGT TERM 577 507165 - 507180 + G 74 -2.4 -5.0916 | overlap 507166 TTATCAATGAAGGGT TGCCGG CTGA CCAGCG TTTTTCTCTTGAACC Paes_0472 506174 - 507238 + | protein of unknown function DUF900 hydrolase family protein TERM 578 507546 - 507584 + G 76 -3.9 -5.01732 | gap 1, overlap 507548 TTCGGCATGGCCTCC CGGCTGATCGATGAGGTT ATCG AACTGCGT-GATCAGCGG TTTTTTGAGGCGCTT Paes_0473 507360 - 507995 + | HAD-superfamily hydrolase, subfamily IA, variant 3 Paes_0474 510858 - 508018 - | excinuclease ABC, A subunit Paes_0475 511370 - 511984 + | hypothetical protein TERM 579 512045 - 512080 + G 88 -11.9 -3.71284 | overlap 512046 AACGGCAAGGCGTTT TCCTCAGGAGTTCCC GTAACG GGGGGTTCCTGAGGG TTCTGTTGCTGGCAG TERM 580 512046 - 512079 + G 81 -13.2 -2.82449 | overlap 512045 ACGGCAAGGCGTTTT CCTCAGGAGTTCCC GTAACG GGGGGTTCCTGAGG GTTCTGTTGCTGGCA Paes_0476 512017 - 512649 + | hypothetical protein Paes_0477 512646 - 513485 + | hypothetical protein TERM 581 514935 - 514980 + G 72 -5.3 -4.49756 | gap 1, opp_overlap 514922 514953 GATCGGATATGCATC CGGTTCAGGGCGGCAGAAGCAT GCC ATGCGTCTGCAGGTCAG-GCCG TTTTCATGTTTGAAC TERM 582 515048 - 515068 + G 80 -5.3 -4.91285 | CAGATGATGTGGCCT CTCTCCTGC CCG GCGGGACGG TTTTGTTGTCTTCAT Paes_0478 513499 - 516129 + | hypothetical protein TERM 583 516177 - 516140 - T 100 -18.6 -3.05521 | opp_overlap 516140 516145 516146, overlap 516146 AGTAGATTTGCAATA GAAAAAGGCCCCACGT ATGGAA ACGTGGGGCCGTTTTC TTATCCGATGGCGGC TERM 584 516140 - 516177 + T 100 -18.6 -3.32844 | opp_overlap 516140 516146, overlap 516145 516146 AGTAGATTTGCAATA GAAAAAGGCCCCACGT ATGGAA ACGTGGGGCCGTTTTC TTATCCGATGGCGGC TERM 585 516145 - 516172 + T 100 -12.7 -4.78237 | opp_overlap 516140 516146, overlap 516140 516146 ATTTGCAATAGAAAA AGGCCCCACGT ATGGAA ACGTGGGGCCG TTTTCTTATCCGATG TERM 586 516171 - 516146 - T 100 -16.2 -5.0916 | opp_overlap 516145 516140 516146, overlap 516140 TTTGCAATAGAAAAA GGCCCCACGT ATGGAA ACGTGGGGCC GTTTTCTTATCCGAT TERM 587 516146 - 516171 + T 100 -16.2 -3.46219 | opp_overlap 516146 516140, overlap 516145 516140 TTTGCAATAGAAAAA GGCCCCACGT ATGGAA ACGTGGGGCC GTTTTCTTATCCGAT Paes_0479 518925 - 516178 - | pyruvate, phosphate dikinase TERM 588 518813 - 518827 + g 75 -5 -4.77036 | overlap 518815 GCCAGGTTTGCGCCT TTTCCT CCA AGGAGA TTTTTCATCGTGGCA TERM 589 519139 - 519151 + G 70 -5.5 -4.37092 | overlap 519140 TTACGGGTTGACCTC TGTCG GTG CGACG TTTTCTGAACGAGGT Paes_0480 519071 - 519937 + | inner-membrane translocator Paes_0481 520646 - 519990 - | ThiJ/PfpI domain protein Paes_0482 520745 - 521368 + | hypothetical protein Paes_0483 521902 - 521396 - | hypothetical protein TERM 590 521522 - 521511 - G 81 -5.8 -4.76802 | overlap 521512 TTGAAAAAGAAGAAA GCTG CCGC CAGC AGAATGAGGTGAGAG TERM 591 521840 - 521854 + g 83 -5.6 -5.15969 | overlap 521842 AAGAAACTGAATTGC GACGAG GTA CTCGCC TTTTTTGCCTTGCCA TERM 592 521870 - 521880 + g 70 -6.8 -4.0828 | overlap 521862 TTTTTTGCCTTGCCA CCAC GGT GTGG TTTGATGTTTTCCGT TERM 593 521930 - 521943 + H 79 -6.7 -4.60143 | opp_overlap 521930, overlap 521925 TATGTATCTTGAAAA CCACA TTTT TGTGG TTTTATCTGATCTGT TERM 594 521943 - 521930 - H 70 -6.7 -4.11692 | opp_overlap 521925 521930 TATGTATCTTGAAAA CCACA TTTT TGTGG TTTTATCTGATCTGT Paes_0484 522002 - 522550 + | isochorismatase hydrolase Paes_0485 523631 - 522552 - | tetraacyldisaccharide 4'-kinase TERM 595 522727 - 522746 + g 100 -10 -5.70829 | opp_overlap 522727 TCTGTTGTCACGATA GCCAGGTT ATGC GACCTGGC TTTTTTTATGATGTT TERM 596 523060 - 523072 + g 73 -9.1 -3.64369 | opp_overlap 523060, overlap 523058 523069 GTGATGACGGCAAGA TCGGC ACG GCCGA TATTCTTTGTCGGTT TERM 597 523617 - 523605 - G 72 -7.7 -3.93658 | AAGAGCGGGAAAGAA GAGCA GAC TGCTC GGGCTCTTATGCACC Paes_0486 524271 - 523624 - | protein of unknown function DUF374 TERM 598 524976 - 524986 + G 72 -8.2 -3.85698 | opp_overlap 524976 TCCAAGGGTTATCAA GGCC AGC GGCC TTTGTGCGGGAAAAG TERM 599 525429 - 525457 + G 83 -12.5 -3.3785 | overlap 525407 CGATCCGGAGGCTCA GGTCGTCCTGC CTCTGCT GCAGGACGATC TTGTCGATGCATTGA Paes_0487 524530 - 525813 + | phosphoribosylamine/glycine ligase Paes_0488 525839 - 526273 + | hypothetical protein Paes_0489 526360 - 527847 + | Carbamoyl-phosphate synthase L chain ATP-binding Paes_0490 527844 - 528623 + | Indole-3-glycerol-phosphate synthase TERM 600 528628 - 528646 + T 70 -6.6 -4.14392 | overlap 528625 528629 AGCGGATTTAATCTG TGCGGCAG CTT CTGCCGGG TTTTCAGCCTTGAAA Paes_0491 529269 - 528604 - | Ribulose-phosphate 3-epimerase TERM 601 528682 - 528705 + g 70 -10.2 -3.17219 | opp_overlap 528681 528682, overlap 528695 TGTTCCTGCTATAAG CGCGTCGGCG CCAG CGCTGACGAG TTCCTGCGCGTTATC Paes_0492 531610 - 529325 - | surface antigen (D15) TERM 602 530127 - 530148 + g 70 -7.3 -4.09511 | opp_overlap 530125 CTGGTTGGATCAATG CCGATATTG TCTG CAAGATCGG TTTTGAAGAGCTGTT TERM 603 530323 - 530341 + g 77 -3 -5.15969 | TGTATTCAAGCGTTG CCTCGTAG GCG CTGCCGGG TTTTTTCAGTTCCGG TERM 604 531238 - 531253 + g 74 -2.6 -5.14563 | TGGCGAAGAAATAGC CTTTAT AGGT ATAGAG TTTTTTGATCAGGGC Paes_0493 531911 - 531684 - | hypothetical protein TERM 605 532060 - 532077 + r 86 -3.3 -5.60993 | GATCATCATCACCTA CGGCTGT TCCT GCGGCTG TTTTTTTCTGACCGC Paes_0494 535090 - 532238 - | DNA polymerase I TERM 606 533350 - 533367 + g 83 -5.5 -5.03715 | overlap 533343 533351 GGTCTGCTGTCAGCG ATGCGAC TTTT GTCGCAG TTTTTTCCAGATGCT TERM 607 533351 - 533366 + g 73 -9 -3.61506 | overlap 533343 533350 GTCTGCTGTCAGCGA TGCGAC TTTT GTCGCA GTTTTTTCCAGATGC TERM 608 534320 - 534341 + g 73 -3.7 -4.79223 | AAGGCTCTTGCGTGT TCTCGGAGG AAGC TTTTCGAGA TTTTTGCTGATCTCA Paes_0495 535913 - 535074 - | Prephenate dehydratase Paes_0496 536231 - 536983 + | protein of unknown function DUF28 Paes_0497 536980 - 537543 + | crossover junction endodeoxyribonuclease RuvC Paes_0498 537612 - 538166 + | CDP-alcohol phosphatidyltransferase TERM 609 538201 - 538173 - T 100 -16.1 -5.41746 | AAGGTCTGAAAAAAA GCCGGTCTCTC TTTCACT GAGAGACCGGC TTGCAAGGTTGTCAA TERM 610 538219 - 538232 + T 100 -6.7 -5.47159 | GCAAGGTTGTCAATG TAGCC TGAT GGCTA TTTTTCTTTCTTGAC Paes_0499 539633 - 538230 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 611 538314 - 538333 + g 82 -9.2 -4.25848 | opp_overlap 538311 538312 TTTTCCATCAAACTG GCAGACGC TGCG GCGCCTGC TTTTCATGACAGCTT TERM 612 538563 - 538575 + g 76 -7.7 -4.29432 | CATCGTCACATTTTT GATCG AGA CGATC TTTTCGTCGAGTTTG Paes_0500 540558 - 539773 - | Inositol-phosphate phosphatase TERM 613 539869 - 539853 - G 70 -5 -4.56597 | TGTGGTGGGCAAAAA CGTCGG GATTG CCGTCG AAGCCTGTGACAATA TERM 614 540124 - 540144 + g 81 -8.2 -4.30448 | opp_overlap 540109 CTGCCGGGTATCCTG CCGGTCCG ATATC CGTACCGG TTTTCCGTTCAGTTT TERM 615 540307 - 540321 + g 72 -8.6 -3.72695 | GAGGGTGCCGTCCAG TGGATC GAC GATCCA TTTCCTGCCGGAAGT TERM 616 540857 - 540882 + G 77 -6.7 -4.57837 | TGAGATCTTGAACAG GCCCGACTGGA ATCC TCCGGACTGGC TTTTTCCGCCCGTAT Paes_0501 540738 - 541217 + | TspO and MBR like protein TERM 617 541356 - 541397 + G 77 -12.3 -2.78679 | overlap 541355 CAGGATTTTTCATCG TCCCGGCTGCAGGTATTAT GACT GTGCTGCCTGCACCCGGGA GTTTAGCTCACGACA Paes_0502 541228 - 541461 + | hypothetical protein Paes_0503 542033 - 541491 - | hypothetical protein TERM 618 542134 - 542079 - R 100 -23.6 -4.34402 | opp_overlap 542089 542092, overlap 542083 542085 542089 TTCTTTACAGCAAAA TATACATAAAGAAGCCGTCCCGGTCA TCAT CGACCGGGACGGCTTCTTTATAAGTA TGCATTGAAGCGGAA TERM 619 542130 - 542083 - R 100 -28.8 -3.46858 | opp_overlap 542089 542092, overlap 542079 542085 542089 TTACAGCAAAATATA CATAAAGAAGCCGTCCCGGTCA TCAT CGACCGGGACGGCTTCTTTATA AGTATGCATTGAAGC TERM 620 542128 - 542085 - R 100 -29.2 -3.29568 | opp_overlap 542089 542092, overlap 542083 542079 542089 ACAGCAAAATATACA TAAAGAAGCCGTCCCGGTCA TCAT CGACCGGGACGGCTTCTTTA TAAGTATGCATTGAA TERM 621 542124 - 542089 - R 100 -25.6 -4.27033 | opp_overlap 542089 542092, overlap 542085 542083 542079 CAAAATATACATAAA GAAGCCGTCCCGGTCA TCAT CGACCGGGACGGCTTC TTTATAAGTATGCAT TERM 622 542089 - 542124 + r 100 -24.9 -3.9534 | opp_overlap 542089 542085 542083 542079, overlap 542092 CAAAATATACATAAA GAAGCCGTCCCGGTC ATCATC GACCGGGACGGCTTC TTTATAAGTATGCAT TERM 623 542092 - 542121 + r 100 -20.8 -4.10188 | opp_overlap 542089 542085 542083 542079, overlap 542089 AATATACATAAAGAA GCCGTCCCGGTC ATCATC GACCGGGACGGC TTCTTTATAAGTATG Paes_0504 544154 - 542160 - | acetate/CoA ligase TERM 624 542869 - 542886 + g 79 -4.9 -4.90778 | gap 1 TCTGTCTGCCACCAG GTGT-CGA CGA TCGGACAC TTTTCTTTGCCTACA TERM 625 544467 - 544439 - R 86 -12.6 -3.14587 | gap 1, overlap 544444 CGGGATAAAATCAGA GCAAATCCCCCTT TTTC AAGGGGGA-TTGC GGAAGATCTGGGGGA TERM 626 544463 - 544444 - R 93 -12.2 -3.92694 | overlap 544439 TAAAATCAGAGCAAA TCCCCCTT TTTC AAGGGGGA TTGCGGAAGATCTGG Paes_0505 546907 - 544487 - | leucyl-tRNA synthetase TERM 627 544518 - 544533 + g 74 -3.2 -4.96427 | GCGAAGTTGACCAGT TTTCCG GGAA CGGCAA TTTCTTTTATTATTG TERM 628 544727 - 544711 - G 75 -5.1 -4.72986 | GAGCCGGATCAAAAA CAGGG AACGGCG CCCTG GCGATCGGCTCGTTG TERM 629 545847 - 545860 + g 82 -2.3 -5.43866 | overlap 545848 TGAATGACTTCGATG ATCGG CAGC CCGAA TTTTTTTGCAAATTC TERM 630 545997 - 546012 + g 100 -6 -5.72622 | opp_overlap 545996, overlap 545993 TTGATGGCATAGGAG CCGGTG AAGA CTCCGG TTTTTTCTTTCTGCA TERM 631 547076 - 547099 + r 82 -8.1 -4.46615 | opp_overlap 547076, overlap 547071 GCGGGCAAGAAAAAA GCCGTGCAG TCAGTT CTGCACAGC TTTTCCTTGATAGTC TERM 632 547099 - 547076 - R 100 -10.3 -5.4505 | opp_overlap 547071 547076 GCGGGCAAGAAAAAA GCCGTGCAG TCAGTT CTGCACAGC TTTTCCTTGATAGTC Paes_0506 549337 - 547133 - | Polyribonucleotide nucleotidyltransferase TERM 633 547893 - 547903 + g 81 -8.2 -4.37886 | AGACCCATAGCGATG CCGG AGA CCGG TTTTCTGAGCGGTAC TERM 634 548560 - 548576 + g 81 -12.3 -3.17714 | AGAGCGGCATGTATG CGAGCTC TTT GAGCTCG TTGCTGCAGATTTCA TERM 635 549242 - 549257 + g 79 -10.4 -3.73411 | opp_overlap 549241 549242, overlap 549240 ATTCAGGCGAACAAT GGCCGA GCCA TCGGCC TGTTTTGCCATTTTC TERM 636 549432 - 549445 + r 73 -5.3 -4.7078 | TGAAGGTGACGGACG GGTAT GAAA ATACC TTTTTACGTAATTAA Paes_0507 550365 - 549499 - | pantoate/beta-alanine ligase Paes_0508 551074 - 550349 - | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase TERM 637 550424 - 550434 + g 100 -3.2 -5.60993 | opp_overlap 550414 GACCACCACGACAAA TTCG CCG CGGA TTTTTTTCTCCGAGA TERM 638 550630 - 550645 + g 84 -3.9 -5.24129 | opp_overlap 550630 ATGCGAGAAACTCAA GGCGG CTTTTC CTGCC TTTTTTATGAGGCAG TERM 639 551093 - 551118 + H 95 -12.6 -3.68073 | overlap 551088 TTTGATTTTTGCGCC TCAGGCGGCC TTTTGC GGCTGCCTGA TTGTTGCGTGCAATG TERM 640 551386 - 551370 - g 74 -5.8 -4.56597 | opp_overlap 551370 551374, overlap 551374 CGGGTTGCGGAAAAA CGACCC TCGGC AGGTCG CTTCTGAGGCTTGTT Paes_0509 551198 - 552190 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 641 552895 - 552844 - g 74 -2.8 -5.02074 | gap 1 GGACGCTTGAAAAAA TCGGAGTCTCT-TTCCAGGCCGCCC AGT GGAAGGCCTGGAAGAGCGGTATCGA ACCCTATACGCGAGA Paes_0510 552336 - 554126 + | signal peptide peptidase SppA, 36K type TERM 642 555352 - 555367 + G 72 -6.2 -4.35017 | opp_overlap 555352 555354 GATTCTGGCAGAGGA GAGAAT GGAT ATTCTC TTTGTTCCCTTTTTG Paes_0511 554189 - 555712 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Paes_0512 557315 - 555765 - | Mg chelatase, subunit ChlI TERM 643 556516 - 556495 - G 90 -13 -3.53012 | opp_overlap 556479 556515 TGCGGGCTGCGGAAA GGCCGCTC GGTCAT GAGCGGCC GGTCGCGCTGCAGCA TERM 644 556596 - 556607 + g 70 -7.2 -4.07687 | CAGAGGGGGCATGAT GCCC GGCA GGGC TTTTGCCAGGAGCGT Paes_0513 557661 - 558440 + | photosystem P840 reaction center cytochrome c-551 TERM 645 558499 - 558480 - T 95 -12.2 -4.42386 | opp_overlap 558480 CTTCGATCTATAAAA GCCCTGAA GAAA TTCAGGGC TTTTTGTTTTGACGA TERM 646 558480 - 558499 + T 100 -12.2 -5.45802 | opp_overlap 558480 CTTCGATCTATAAAA GCCCTGAA GAAA TTCAGGGC TTTTTGTTTTGACGA TERM 647 558579 - 558527 - T 100 -18 -3.33315 | opp_overlap 558533 558535 558539, overlap 558530 558539 CGAATAGTGCGATAA GGACGATAGAAAGCGGCTGATG CATTGAGCT CATCAGCCGCTTTCTATCGTTG AGGATCCGGCTTTTT TERM 648 558576 - 558530 - T 100 -24.1 -2.83449 | opp_overlap 558533 558535 558539, overlap 558527 558539 ATAGTGCGATAAGGA CGATAGAAAGCGGCTGATG CATTGAGCT CATCAGCCGCTTTCTATCG TTGAGGATCCGGCTT TERM 649 558533 - 558573 + T 100 -18.6 -2.72344 | opp_overlap 558530 558527 558539, overlap 558535 558539 GTGCGATAAGGACGA TAGAAAGCGGCTGATG CATTGAGCT CATCAGCCGCTTTCTA TCGTTGAGGATCCGG TERM 650 558535 - 558571 + T 100 -16.8 -2.90723 | opp_overlap 558530 558527 558539, overlap 558533 558539 GCGATAAGGACGATA GAAAGCGGCTGATG CATTGAGCT CATCAGCCGCTTTC TATCGTTGAGGATCC TERM 651 558567 - 558539 - T 93 -11.8 -4.11235 | opp_overlap 558535 558533 558539, overlap 558530 558527 TAAGGACGATAGAAA GCGGCTGATG CATTGAGCT CATCAGCCGC TTTCTATCGTTGAGG TERM 652 558539 - 558567 + T 93 -11.8 -4.1347 | opp_overlap 558539 558530 558527, overlap 558535 558533 TAAGGACGATAGAAA GCGGCTGATG CATTGAGCT CATCAGCCGC TTTCTATCGTTGAGG Paes_0514 558952 - 558596 - | 7-cyano-7-deazaguanine reductase Paes_0515 559144 - 559851 + | Methyltransferase type 12 TERM 653 560385 - 560411 + G 76 -10.9 -3.33492 | GCCCCGATCGAGGAG GAGCGGCAG GGGATCAGG CTGCCGCTC TTCTACCATCAGTCC Paes_0516 559854 - 560744 + | hypothetical protein TERM 654 560800 - 560817 + G 70 -7 -4.13767 | GGATTTCTGGACTAT GTGACG CTCGAA CGTCAC TTTTCGCGTCACACC TERM 655 561110 - 561100 - g 72 -8.2 -3.72576 | opp_overlap 561100 561099 CCCCGTTTCAGTAAA CCGG TTC CCGG ATTTCTCAGCGAGCG Paes_0517 560722 - 561729 + | integrase family protein Paes_0518 561814 - 562146 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 656 562182 - 562161 - f 100 -17.3 -2.87211 | opp_overlap 562161, overlap 562163 AGGTTTTCTCAGACA CAGGGCCGG ATTG CCGGCCCTG TTTTATTTTTCAGGA TERM 657 562161 - 562182 + F 100 -17.3 -5.26119 | opp_overlap 562161 562163 AGGTTTTCTCAGACA CAGGGCCGG ATTG CCGGCCCTG TTTTATTTTTCAGGA TERM 658 562180 - 562163 - f 89 -14.1 -2.98823 | opp_overlap 562161, overlap 562161 GTTTTCTCAGACACA GGGCCGG ATTG CCGGCCC TGTTTTATTTTTCAG TERM 659 562243 - 562266 + G 85 -3 -5.42862 | opp_overlap 562246, overlap 562245 562246 TCAGAAAGGTCTTAA GAAGCGATCG ATGA CGGTCGCATA TTTTTTTGAAAATAT TERM 660 562245 - 562264 + G 70 -5.6 -4.35085 | opp_overlap 562246, overlap 562243 562246 AGAAAGGTCTTAAGA AGCGATCG ATGA CGGTCGCA TATTTTTTTGAAAAT TERM 661 562481 - 562440 - g 91 -11.1 -4.2074 | gap 1, opp_overlap 562432 562439 562438 562442 TCGGCAATACAGAAA CCCGTTTTCTG-AATCATCT TGA AGATGATGACAGAAAACGTG CATTTGAGAGCCTCA TERM 662 562442 - 562479 + G 76 -12.3 -2.64274 | gap 1, opp_overlap 562440, overlap 562432 562439 562438 GGCAATACAGAAACC CGTTTTCTG-AATCATCT TGA AGATGATGACAGAAAACG TGCATTTGAGAGCCT TERM 663 562573 - 562588 + G 78 -8.2 -4.15044 | TGATATGGCTACCCG GGCGGG AGTT CCCGTC TTTGTTACCCGCCAC Paes_0519 562217 - 563239 + | HPr kinase TERM 664 564906 - 564886 - g 72 -5.4 -4.49958 | gap 1 ACTGGATCAAAGAAA CGCAG-GGT TTTA ACCGCCGCG TCGAGGGAGAAGAGG Paes_0520 563355 - 564992 + | extracellular solute-binding protein family 5 TERM 665 565082 - 565103 + G 78 -5.7 -4.8622 | TTTTATTATCAGGCT TGCCCCGGG CGAT CCCGCTGCA TTTTTCATTCAGCCG TERM 666 565748 - 565763 + G 88 -8.2 -4.64861 | GGTCATTACGCTCAT CGGCGG CTCA CTGCCG TTTATTTTCAGCGGC Paes_0521 564996 - 565961 + | binding-protein-dependent transport systems inner membrane component Paes_0522 565998 - 567029 + | Holliday junction DNA helicase RuvB TERM 667 567804 - 567854 + GT 81 -9 -4.10925 | gap 1, overlap 567807 567808 TCCTGCATTTCTTCC TGCA-TGGGTCGATCTGCTCGGC GTCCGG GCCGAGCAGGGTGACCCGCTTCG TTTTCAGGAGTGTCT TERM 668 567807 - 567850 + GT 100 -13.1 -3.67175 | overlap 567804 567808 TGCATTTCTTCCTGC ATGGGTCGATCTGCTCGGC GTCCGG GCCGAGCAGGGTGACCCGC TTCGTTTTCAGGAGT TERM 669 567808 - 567849 + GT 100 -16.6 -2.79823 | overlap 567807 567804 GCATTTCTTCCTGCA TGGGTCGATCTGCTCGGC GTCCGG GCCGAGCAGGGTGACCCG CTTCGTTTTCAGGAG Paes_0523 566995 - 568743 + | Tetratricopeptide TPR_2 repeat protein Paes_0524 569560 - 568763 - | CRISPR-associated protein Cas6 Paes_0525 570009 - 569809 - | hypothetical protein Paes_0526 570665 - 570018 - | Methyltransferase type 11 Paes_0527 570891 - 571373 + | transcriptional regulator, BadM/Rrf2 family Paes_0528 571457 - 571579 + | hypothetical protein TERM 670 571609 - 571635 + F 100 -4.5 -5.626 | gap 1 GTCCACGAAAACGCC CCGGA-AGCA CACTGTCT TGCTATCCGG TTTTTTTGTCAGGTC TERM 671 571863 - 571875 + G 90 -4.8 -5.4251 | overlap 571862 AAACTACTTCTCTTG CAGC TCTTT GCTG TTTTTTGTCTCTGCA Paes_0529 571839 - 572318 + | hypothetical protein Paes_0530 572350 - 572532 + | hypothetical protein TERM 672 572531 - 572581 + T 100 -15.7 -3.36492 | opp_overlap 572545, overlap 572545 AAATTCGTCACTGGT GATTGAAAAAAAAAGCGCGGTTC CTGAT GAACCGCGCTTTTTTTGTTTGTC TTGTACCCTTGACGC TERM 673 572545 - 572567 + T 100 -14.9 -6.04953 | opp_overlap 572545, overlap 572531 TGATTGAAAAAAAAA GCGCGGTTC CTGAT GAACCGCGC TTTTTTTGTTTGTCT TERM 674 572567 - 572545 - T 100 -14.9 -6.11644 | opp_overlap 572545 572531 TGATTGAAAAAAAAA GCGCGGTTC CTGAT GAACCGCGC TTTTTTTGTTTGTCT Paes_0531 576151 - 572597 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 675 572688 - 572703 + g 72 -4.7 -4.64676 | TCGAAGTACTGTTTT GCCAT GTCCGG ATGGC TTTTCTTGAGCATGC TERM 676 573296 - 573316 + g 70 -5.3 -4.33258 | overlap 573289 573308 GAGATTTTTCGCTTC CTGGCGGTC TAT GAGAGCCAG TTTCTCTTTAAGAGT TERM 677 573701 - 573724 + g 79 -10.2 -3.76759 | opp_overlap 573696 573695, overlap 573718 ACCTGAGAATTCGAA GAGCGGCTGC TGGA GCTGCTGCTC TTTGATCAGCTTGAT Paes_0532 576300 - 576148 - | hypothetical protein Paes_0533 576421 - 577152 + | RNA methyltransferase, TrmH family, group 3 TERM 678 577226 - 577242 + F 73 -5.1 -4.61231 | opp_overlap 577240 AGAACCTCTCTGGCA CGGCTAA CTA TTAACCG TTTTTACGACTATGA Paes_0534 577254 - 577637 + | glycine cleavage system H protein TERM 679 578976 - 579021 + G 78 -10.6 -3.45839 | opp_overlap 578984, overlap 578977 578984 GAGATGGATAGTTTT GTCGAAAACCTCGGGGC-GATC AGCT GATCAGCCCC-AGGGTTTCGAG TTCCTGTTTCAGGAT Paes_0535 577668 - 579002 + | Glycine dehydrogenase (decarboxylating) TERM 680 578977 - 579020 + T 87 -14.1 -2.67021 | opp_overlap 578984, overlap 578976 578984 AGATGGATAGTTTTG TCGAAAACCTCGGGGC-GATC AGCT GATCAGCCCC-AGGGTTTCGA GTTCCTGTTTCAGGA TERM 681 578984 - 579014 + T 77 -9.7 -3.69092 | gap 1, opp_overlap 578984, overlap 578977 578976 TAGTTTTGTCGAAAA CCTCGGGGC-GATC AGCT GATCAGCCCCAGGG TTTCGAGTTCCTGTT TERM 682 579014 - 578984 - T 81 -9.7 -4.07885 | gap 1, opp_overlap 578984 578977 578976 TAGTTTTGTCGAAAA CCTCGGGGC-GATC AGCT GATCAGCCCCAGGG TTTCGAGTTCCTGTT Paes_0536 579888 - 578995 - | dihydrodipicolinate synthase TERM 683 579023 - 579035 + g 90 -7.7 -4.88258 | CCCAGGGTTTCGAGT TCCTG TTT CAGGA TTTTCTTATGCTTTT Paes_0537 581709 - 580003 - | DNA repair protein RecN TERM 684 581799 - 581847 + r 72 -10.5 -2.9162 | gap 3, overlap 581797 GCTGAATTGTTGATG CGG-CACACTG--CAGTGAGGGCT GGTT AGCCCTCACTGATCAGCGTGATCG TCGTTTCAAGCGTTG Paes_0538 582829 - 581822 - | hypothetical protein TERM 685 582401 - 582379 - G 82 -3.4 -5.26875 | overlap 582380 582381 TGTTGAAGGAAAAAA CCTTTCCCTC TAC AAGGAAAATG CTGACATCCGGACGT TERM 686 582467 - 582437 - G 88 -10.5 -4.11692 | gap 1, opp_overlap 582436 582437 GAGGTAGTCGTAAAA TCCGACCAGCCGCG AAGC CGCGACTGAT-GGA CTGTTGTCTGGTGTT TERM 687 582541 - 582552 + g 72 -4.4 -4.72272 | opp_overlap 582541 GCGCATCGGCAAAAT GGTA GCTG TACC TTTTTCCTGAAGCCG TERM 688 582894 - 582931 + r 100 -12.9 -4.386 | gap 1, opp_overlap 582900, overlap 582900 AGACAGGAGCGCAAA GCGAAACAGTCCGGCAGT TCA ACT-CCGGACTGTTTTCC TTTTATCAGCCCTTG TERM 689 582900 - 582925 + r 100 -12.7 -4.73108 | gap 1, opp_overlap 582900, overlap 582894 GAGCGCAAAGCGAAA CAGTCCGGCAGT TCA ACT-CCGGACTG TTTTCCTTTTATCAG TERM 690 582925 - 582900 - R 100 -12.7 -3.85165 | gap 1, opp_overlap 582900 582894 GAGCGCAAAGCGAAA CAGTCCGGCAGT TCA ACT-CCGGACTG TTTTCCTTTTATCAG Paes_0539 583149 - 582937 - | twin-arginine translocation protein, TatA/E family subunit Paes_0540 583919 - 583266 - | phosphatidylserine decarboxylase related protein TERM 691 583474 - 583461 - G 76 -8.1 -4.15044 | CCTTCGGGCAAGAAA CCCAG ATAC CTGGG AGAAGAATACTTTGG TERM 692 583677 - 583687 + g 79 -4.6 -4.91109 | ATTTTTTCCGGTAAA CGGG TGG TCCG TTTTTCTGATAAGGA TERM 693 584212 - 584239 + G 71 -2.6 -4.9725 | gap 1, overlap 584237 TGGCGCTCATGCATC TGCTTCAGTCGGC CAG GCCGG-TGCTGCA TTTTTCTCTGGAGAT Paes_0541 584082 - 585092 + | tRNA(Ile)-lysidine synthetase TERM 694 585107 - 585086 - T 76 -10.1 -3.31461 | opp_overlap 585087, overlap 585087 GAGCGATGCGGAGAA GGGCTGACC TTTT GGTCAGCCT TTGTAACCCTGAGAG TERM 695 585106 - 585087 - T 86 -13.6 -2.58663 | opp_overlap 585087, overlap 585086 AGCGATGCGGAGAAG GGCTGACC TTTT GGTCAGCC TTTGTAACCCTGAGA TERM 696 585087 - 585106 + T 100 -13.6 -3.87815 | opp_overlap 585086 585087 AGCGATGCGGAGAAG GGCTGACC TTTT GGTCAGCC TTTGTAACCCTGAGA Paes_0542 586194 - 585124 - | hypothetical protein TERM 697 586026 - 586038 + g 82 -3.3 -5.27335 | GTTCTGCGCTGAGCG GCTCG GGT TGGGC TTTTTGTTTGGGCCA TERM 698 586091 - 586122 + g 100 -2.8 -5.60993 | opp_overlap 586101 586110, overlap 586110 ACGAGACCGATGGTT CCCAGAATGACGGT GATA ACCAGCAGGCTGGG TTTTTTTCTGGGCGG Paes_0543 586634 - 586194 - | Ribonuclease H TERM 699 586670 - 586647 - R 100 -8.2 -6.06529 | CATAGACAAAAAAAA GGCTCAATCC CGAA AAATTGAGCC CTGTAAAAAACACTT Paes_0544 586931 - 586713 - | ribosomal protein L28 Paes_0545 588001 - 587009 - | bacteriochlorophyll/chlorophyll synthetase Paes_0546 589129 - 588074 - | anthranilate phosphoribosyltransferase TERM 700 589053 - 589035 - G 72 -4.5 -4.64766 | opp_overlap 589035 GCGATATCTGAAAAA CCGCC GGTCATGAT GGCGG TTATGCAGGCTTCCA TERM 701 589066 - 589088 + g 78 -10.6 -3.48276 | overlap 589069 CGGTTATGCAGGCTT CCATCTCAGC GGA GCTGAGATCG TTATCTGCAAGAAGC TERM 702 589069 - 589085 + g 71 -10.9 -2.88822 | overlap 589066 TTATGCAGGCTTCCA TCTCAGC GGA GCTGAGA TCGTTATCTGCAAGA TERM 703 589695 - 589707 + G 74 -6.2 -4.58283 | CCGGTTGGCTATTGT GCCG GTGAG CGGC TTTTTCGACGAGTTC Paes_0547 589342 - 590412 + | peptidase M24 Paes_0548 591774 - 590605 - | DNA-directed DNA polymerase TERM 704 590994 - 591030 + g 100 -10.9 -4.62471 | overlap 590980 590995 CCGGAAGTGTCATTG CCGCTTGATCTGTTATG CTG CGTGACAGGTCGAGCGC TTTTTCCAGGTTGCC TERM 705 590995 - 591029 + g 100 -14.4 -3.37 | overlap 590980 590994 CGGAAGTGTCATTGC CGCTTGATCTGTTATG CTG CGTGACAGGTCGAGCG CTTTTTCCAGGTTGC TERM 706 591879 - 591847 - R 89 -12 -3.58726 | gap 1, overlap 591852 TTTGTCGATATACAA CAGCAGGGCGCACAG AAAA CGGTGCGCCCC-CTG GCATCAGCAGTGCAT TERM 707 591875 - 591852 - R 87 -13.8 -2.84707 | overlap 591847 CGATATACAACAGCA GGGCGCACAG AAAA CGGTGCGCCC CCTGGCATCAGCAGT TERM 708 591925 - 591936 + r 80 -5.8 -5.04385 | GGTGAGCCAGTTGTA GGGA TCGG TCCC TTTTTTGACGATGTC Paes_0549 592812 - 591901 - | branched-chain amino acid aminotransferase TERM 709 592932 - 592981 + r 74 -10.1 -3.26471 | opp_overlap 592941 592945, overlap 592945 AAAAGCAGCGGCCGG TTACATAAAGAAAGGTCCCGC ATTTTCGG GCGGGACCTCTCGTAATGTGA TTGGTGTGAGGCTCC TERM 710 592972 - 592941 - R 100 -13.8 -4.03234 | opp_overlap 592932 592945, overlap 592945 GGCCGGTTACATAAA GAAAGGTCCCGC ATTTTCGG GCGGGACCTCTC GTAATGTGATTGGTG TERM 711 592945 - 592968 + r 75 -11 -2.85378 | opp_overlap 592941 592945, overlap 592932 GGTTACATAAAGAAA GGTCCCGC ATTTTCGG GCGGGACC TCTCGTAATGTGATT TERM 712 592968 - 592945 - R 95 -11 -4.62441 | opp_overlap 592945 592932, overlap 592941 GGTTACATAAAGAAA GGTCCCGC ATTTTCGG GCGGGACC TCTCGTAATGTGATT Paes_0550 594214 - 593009 - | 6-phosphofructokinase TERM 713 594314 - 594333 + H 91 -6.4 -5.41143 | gap 1 CAACTGAATTCATAG CCCTCGGTC TCT GGC-GAGGG TTTTTTTACGCGATG Paes_0551 594474 - 595742 + | protein of unknown function DUF214 TERM 714 595814 - 595868 + T 73 -2.8 -5.10461 | overlap 595817 CCGATCACCGATCAC TGGTCACCGACCACTGGTCACTGGTC ACC GATCACCGATCACTGGTCACTGATTA TTTTTCTTCAATCAG TERM 715 595817 - 595865 + T 71 -4.5 -4.64495 | overlap 595814 ATCACCGATCACTGG TCACCGACCACTGGTCACTGGTC ACC GATCACCGATCACTGGTCACTGA TTATTTTTCTTCAAT Paes_0552 596339 - 595866 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 716 595910 - 595931 + g 74 -2.1 -5.05505 | overlap 595912 595928 GAGCTGCGGCGCCTT CCTGGCGAC CGAT GTAGCCGAG TTTTTCGTTTGTGGT Paes_0553 597367 - 596438 - | dihydroorotate dehydrogenase family protein TERM 717 597424 - 597473 + r 71 -8.6 -3.46813 | gap 1, opp_overlap 597434, overlap 597401 597422 597436 GCACTGATCGTGTTT CCCGATATCATTCCGGAGAGGCT AACTG AGCCTCTCCGGT-TGATGATGGC TATTATTCCTCGTTG TERM 718 597464 - 597434 - R 74 -11.1 -2.62184 | opp_overlap 597424 597422 597436 TGTTTCCCGATATCA TTCCGGAGAGGCT AACTG AGCCTCTCCGGTT GATGATGGCTATTAT TERM 719 597436 - 597462 + r 100 -18.1 -3.23042 | opp_overlap 597434, overlap 597424 597422 TTTCCCGATATCATT CCGGAGAGGCT AACTG AGCCTCTCCGG TTGATGATGGCTATT Paes_0554 599590 - 597476 - | alpha-glucan phosphorylase TERM 720 600074 - 600061 - g 91 -9.5 -4.71426 | opp_overlap 600060 600073 TTCGCAGGAAGAAAA CGGCG TTTA CGCCG CCGGCTTCTGGAGTT TERM 721 600134 - 600144 + G 74 -8.2 -3.90328 | opp_overlap 600127 GCAATGAACCCGTAA CGGG ATT CCCG TTTATCAAGATTCTC TERM 722 600563 - 600575 + G 78 -5.5 -4.84017 | GCGAGATGGTTATTG GAGCG GAT CGTTC TTTTTCTCAGAGGTT Paes_0555 599743 - 600615 + | metallophosphoesterase Paes_0556 601199 - 600705 - | Ferroxidase TERM 723 601299 - 601338 + r 100 -22.4 -2.83409 | opp_overlap 601300 601302 601307, overlap 601302 601307 AGTTTCTCTTATCGA ACACAAAAGGCTGCGCTT CCAG AAGCGCAGCCTTTTGTGC TGTCATGGATTCCTG TERM 724 601337 - 601300 - R 100 -25.9 -3.05384 | opp_overlap 601299 601302 601307, overlap 601302 601307 GTTTCTCTTATCGAA CACAAAAGGCTGCGCTT CCAG AAGCGCAGCCTTTTGTG CTGTCATGGATTCCT TERM 725 601335 - 601302 - R 100 -22.7 -3.08679 | opp_overlap 601299 601302 601307, overlap 601300 601307 TTCTCTTATCGAACA CAAAAGGCTGCGCTT CCAG AAGCGCAGCCTTTTG TGCTGTCATGGATTC TERM 726 601302 - 601335 + r 100 -22.7 -2.67441 | opp_overlap 601302 601300 601307, overlap 601299 601307 TTCTCTTATCGAACA CAAAAGGCTGCGCTT CCAG AAGCGCAGCCTTTTG TGCTGTCATGGATTC TERM 727 601330 - 601307 - R 100 -16.8 -4.68724 | opp_overlap 601302 601299 601307, overlap 601302 601300 TTATCGAACACAAAA GGCTGCGCTT CCAG AAGCGCAGCC TTTTGTGCTGTCATG TERM 728 601307 - 601330 + r 100 -16.8 -4.52047 | opp_overlap 601307 601302 601300, overlap 601302 601299 TTATCGAACACAAAA GGCTGCGCTT CCAG AAGCGCAGCC TTTTGTGCTGTCATG Paes_0557 601907 - 601401 - | flavodoxin Paes_0558 602270 - 601938 - | hypothetical protein Paes_0559 603030 - 602368 - | TonB family protein Paes_0560 603433 - 603020 - | Biopolymer transport protein ExbD/TolR TERM 729 603307 - 603319 + g 73 -9.1 -3.6215 | CTTGCGGCAGCTCAA CCGGT ATG ACCGG TTTGGCGTAGATTGA Paes_0561 604040 - 603441 - | MotA/TolQ/ExbB proton channel TERM 730 605656 - 605685 + G 73 -3.5 -4.7629 | gap 1, opp_overlap 605643, overlap 605643 605657 605658 GACTCAGGGCGTCGA GGTGACCGCCAGAG TGT CTCTGG-GGTCGGG TTTTTCGATTCATGA Paes_0562 604148 - 606052 + | TonB-dependent receptor TERM 731 606215 - 606233 + G 72 -7.4 -3.86194 | opp_overlap 606231 GATATTGCATCCAGA GCGCTTGA TGG TAAAGCGC TTTATGAGCGGCATT Paes_0563 606077 - 606580 + | hypothetical protein Paes_0564 606602 - 606799 + | hypothetical protein Paes_0565 606841 - 608682 + | TonB-dependent receptor TERM 732 608707 - 608738 + T 100 -14.4 -5.86061 | opp_overlap 608724 TCATCTGTATGGCTG GTCCCGTGGAGCAC AATG GCGTTCCGCGGGAC TTTTTTTTGATGAGG Paes_0566 609712 - 608756 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 733 609588 - 609602 + g 100 -5 -5.60993 | TTTTTTGTTGTGCTT TCTTCT GAC GGAAGA TTTTTTTGTGGGGCG Paes_0567 610322 - 609774 - | hypothetical protein Paes_0568 611295 - 610351 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 734 610744 - 610759 + g 72 -4.6 -4.59853 | opp_overlap 610744 GCCTATAATAGCAAG CCCTTC TTCT GCAGGG TTTTTGGAGAGTTCG TERM 735 611171 - 611182 + g 100 -3.6 -6.13503 | CTGACGAGAAGTACG CCGG TTTT CTGG TTTTTTTTGTTGGTG Paes_0569 611550 - 613886 + | TonB-dependent receptor TERM 736 613904 - 613930 + F 100 -13 -4.60255 | overlap 613905 TTTGTTGTTGTGTTG TGTGGCGTCAGC TTG GCTGGCGCTACG TTTTTGCAGGCTTAT TERM 737 613905 - 613929 + F 100 -14.3 -3.3543 | overlap 613904 TTGTTGTTGTGTTGT GTGGCGTCAGC TTG GCTGGCGCTAC GTTTTTGCAGGCTTA Paes_0570 613966 - 614712 + | MotA/TolQ/ExbB proton channel Paes_0571 614722 - 615255 + | hypothetical protein Paes_0572 615257 - 615823 + | hypothetical protein Paes_0573 615813 - 616640 + | TonB family protein Paes_0574 616989 - 616777 - | hypothetical protein TERM 738 617124 - 617150 + H 100 -11.6 -4.64676 | TCCTTTGTTCTTTGA GCCCCTTCGT TCCCCAT ACGGAGGGGC TTTTATTAAAGGTGG Paes_0575 617785 - 618015 + | hypothetical protein TERM 739 618265 - 618277 + G 77 -3.3 -5.05116 | TGTTGAGAAAACGCC GGCTC ATT GAGAC TTTTCTTGTTTGTCA Paes_0576 618000 - 618719 + | iron (metal) dependent repressor, DtxR family TERM 740 618726 - 618768 + T 100 -10.8 -5.96219 | gap 1, opp_overlap 618735 618737 ATGTCATAGCGTTAT TGTATCAGATACGGCACGT TTTCAT GCATGCCGTATCTGA-ACA TTTTTTTTATCCCTG Paes_0577 618960 - 618775 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 741 619090 - 619103 + H 77 -6.7 -4.56636 | opp_overlap 619079, overlap 619087 619095 TACAGAACTTGTCAG TTCGG TGAA CCGAA TTTTCGTTCATTTTT TERM 742 619095 - 619113 + H 79 -2.5 -5.43514 | gap 1, overlap 619087 619090 AACTTGTCAGTTCGG TGAACCGA ATTT TCG-TTCA TTTTTTGCTTATTTT TERM 743 619377 - 619389 + G 85 -3.4 -5.44119 | CCGGTGAGCTGATTA TCCT GAAAA AGGA TTTTTTTCGCATGCC TERM 744 619822 - 619806 - g 83 -5.1 -5.11063 | opp_overlap 619808, overlap 619808 ATGAGGCAAGAAAAA CAGCAGT CGG ACTGCTT AATGCTGCCTGAGCG TERM 745 619820 - 619808 - g 76 -7.7 -4.17914 | opp_overlap 619808, overlap 619806 GAGGCAAGAAAAACA GCAGT CGG ACTGC TTAATGCTGCCTGAG Paes_0578 619223 - 619834 + | hypothetical protein Paes_0579 620382 - 619900 - | hypothetical protein Paes_0580 620495 - 620965 + | Rieske (2Fe-2S) domain protein TERM 746 621381 - 621349 - g 77 -11.4 -3.16961 | gap 1, overlap 621347 621342 TCAGAATACTCAATA TCGCCGGT-CCGA GAAGGAGT TCGGCACCGGCGA TTGAGACTCAGGTTG Paes_0581 620976 - 621434 + | hypothetical protein Paes_0582 623284 - 621428 - | Carbamoyl-phosphate synthetase large chain domain protein TERM 747 622763 - 622789 + g 72 -10.8 -3.09635 | opp_overlap 622760, overlap 622774 CTGGCCTCCAAAGCT CACGATGACGCC GAG GGGGTCCTCGTG TTCGATGATGCGGAT Paes_0583 623564 - 624829 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 748 625599 - 625589 - g 70 -6.8 -4.12456 | AGAGGATTTCGAAAA TCCC ATG GGGA TCACGATCAAGACTA Paes_0584 624852 - 626174 + | Glycine hydroxymethyltransferase TERM 749 626176 - 626191 + F 100 -3.2 -5.93809 | GCCCGACTCTCTGAC CGGTTA TTGC TGGCCG TTTTTTTTATGCAAG TERM 750 626206 - 626236 + F 100 -12 -6.17669 | opp_overlap 626206 GTTTTTTTTATGCAA GCCTCATAACTG CGATGAA CGGTTATGAGGC TTTTTTTCTTTTCTT TERM 751 626236 - 626206 - f 73 -10.5 -3.05384 | opp_overlap 626206 GTTTTTTTTATGCAA GCCTCATAACTGC GATGA ACGGTTATGAGGC TTTTTTTCTTTTCTT TERM 752 626494 - 626505 + G 70 -3.6 -4.67038 | ACGTACGGAGCTGGT TCGG GAGG CCGG TTTTGATTTTACAGA Paes_0585 626261 - 626656 + | protein of unknown function nitrogen fixation Paes_0586 628585 - 626687 - | DNA primase TERM 753 626897 - 626908 + g 71 -2.2 -4.89233 | opp_overlap 626888, overlap 626888 626887 CAGAAACGCTGTCAG GCAG CGCT TTGC TTTTTGCTGTTCCTC TERM 754 628673 - 628658 - g 79 -4 -5.04385 | opp_overlap 628667 GATAGCTTGAAAAAA TGCATT TCGC AACGCA GATCAGCGTTGTTTG Paes_0587 628657 - 628791 + | hypothetical protein Paes_0588 628829 - 629632 + | MotA/TolQ/ExbB proton channel Paes_0589 629642 - 630175 + | Biopolymer transport protein ExbD/TolR Paes_0590 630177 - 630743 + | hypothetical protein TERM 755 631136 - 631110 - g 70 -10 -3.14211 | ACCTCCCCCGATCAA GGCAGCAGCTCC TCC GGCGCCGGTGCC TGTCGAGAAACCGGC Paes_0591 630769 - 631590 + | TonB family protein Paes_0592 631834 - 631595 - | hypothetical protein TERM 756 631786 - 631798 + gT 100 -3.3 -6.11229 | overlap 631784 TTTCGAGCGGCATCG GCTGT GGA GCGGC TTTTTTTGTTTTACT Paes_0593 633002 - 631809 - | acetylornithine and succinylornithine aminotransferase TERM 757 631990 - 631957 - G 82 -11.7 -3.48593 | overlap 631959 631960 GACTCCTGGACATAA TATGCGGCATCACGG TTAA CCGTGATGCCGATCA TCAATCCGTACTGAC TERM 758 631987 - 631959 - G 95 -14 -3.31726 | gap 1, overlap 631957 631960 CTCCTGGACATAATA TGCGGCATCACGG TTAA CCGTGATGCCG-A TCATCAATCCGTACT TERM 759 631987 - 631960 - G 95 -15.6 -2.58822 | overlap 631959 631957 TCCTGGACATAATAT GCGGCATCACGG TTAA CCGTGATGCCGA TCATCAATCCGTACT TERM 760 632605 - 632615 + g 91 -5.4 -5.44721 | AAGCAGTTTGAAAGG GAGA GGA TCTC TTTTTTTCCGGTGCT Paes_0594 633289 - 633050 - | hypothetical protein Paes_0595 634565 - 633273 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 761 633522 - 633533 + g 75 -7.2 -4.40003 | overlap 633512 GTTGCGCCCTATGGT GGCC ATCT GGCC TTTGTCTTTGTAGCG Paes_0596 635365 - 634871 - | protein of unknown function DUF985 TERM 762 635296 - 635318 + g 78 -10.6 -3.4582 | opp_overlap 635271, overlap 635294 TGCTACGGTAGGTTT CCCGGAAG TAACCGC CTTCCGGG TGTTTGGTCAGCTCA Paes_0597 635876 - 635352 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 763 636336 - 636353 + G 82 -7.7 -4.56597 | gap 1, overlap 636336 AAGGAAATGCATATC GG-CGGTG GTA CACCGACC TTTTTCAGCCCGGAA TERM 764 637402 - 637392 - g 72 -4.6 -4.71061 | ACCTATATTGAAAAA GCCC GCC AGGC AAAGCTGGCCAAGGA Paes_0598 636006 - 637433 + | oxygen-independent coproporphyrinogen III oxidase TERM 765 637462 - 637479 + F 100 -7 -5.72616 | opp_overlap 637462 GCTTGTAGCAAATAA GGGTGA CCCGGT TCACCC TTTTTTTATGTCCCT TERM 766 638038 - 638064 + G 71 -2.9 -4.79352 | AGCCCTTGGTGCTAT CGGGTCGCATC TTATC GATCTGAACCG TTTTCTTGTCGGTGA Paes_0599 637487 - 638632 + | oxidoreductase domain protein Paes_0600 638645 - 638956 + | small multidrug resistance protein Paes_0601 640923 - 638968 - | ABC transporter related TERM 767 639037 - 639050 + g 82 -3.1 -5.25803 | gap 1 CCCATCGTATTTTTT CAG-GG TCG CCGCTG TTTTTTCTCCCGATT TERM 768 639177 - 639187 + g 77 -3.2 -5.1104 | overlap 639169 TGTTGTTGCCCGGTG GGGT GCT ATCC TTTTTGTGTGTGTTT TERM 769 640086 - 640096 + g 75 -5.4 -4.652 | CGACAAAGTCTTTCA GATG GGC CATC TTTTTCAGGTCGTTT TERM 770 641103 - 641117 + G 76 -7.8 -4.15044 | CGTGGACTGGGTTAT GGCCTT GCA GAGGCC TTTCTTGAAAGGGGG Paes_0602 641019 - 641789 + | short-chain dehydrogenase/reductase SDR Paes_0603 642897 - 641752 - | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein TERM 771 643359 - 643390 + H 100 -13.7 -5.88565 | GATCTGTAGTTGAAC CCGGCGGGAGGAT GTAAGG AGCCTTCCGCCGG TTTTTTTATTGTCCG TERM 772 643555 - 643572 + H 74 -4.1 -4.90906 | GTTGTCAGATTATTT GCTGC ATGAGCGG GCAGC TTTTTGATGTTGTAC Paes_0604 643560 - 644351 + | hypothetical protein TERM 773 644849 - 644837 - g 79 -2.6 -5.18726 | TGTTCACAAGAAAAA GCCG GTTGT CAGC GTTGACCTTGATCAG TERM 774 646081 - 646098 + G 81 -6.3 -4.82901 | opp_overlap 646081 ATTATCTGAAAAATG GAGGAGA TCTT TTTCCTC TTTTTGTGGGAAAAA Paes_0605 644358 - 646274 + | protein of unknown function DUF1704 TERM 775 646928 - 646941 + G 72 -5.2 -4.47707 | TTCCGGAAGCCGAGG CCGG TGATAC CCGG TTGTTTTTAATGAAC Paes_0606 646276 - 647322 + | Glutathione synthase TERM 776 647401 - 647385 - T 93 -9.4 -5.14965 | opp_overlap 647385 AGTGTTACGAAAAAA GCCCTC GTTTT GAGGGC TTTTTTTCTGGTGAG TERM 777 647385 - 647401 + T 100 -10.1 -5.67063 | opp_overlap 647385 AGTGTTACGAAAAAA GCCCTCG TTT TGAGGGC TTTTTTTCTGGTGAG Paes_0607 648599 - 647427 - | succinyl-CoA synthetase, beta subunit TERM 778 648500 - 648488 - G 70 -4.8 -4.56597 | CCTGTTCTTCAAAAA GCTG TTCTG CAGC CTGGCGAGCCTCTTC Paes_0608 648740 - 649204 + | CMP/dCMP deaminase zinc-binding Paes_0609 650228 - 649209 - | hypothetical protein TERM 779 649578 - 649557 - G 81 -7.2 -4.72986 | CAGGTTCATGAAAAA CGGCGTCA GAAGGT TGCCGCCG GGAAGCAGTGATGCC Paes_0610 651571 - 650318 - | 2-nitropropane dioxygenase NPD TERM 780 651273 - 651287 + g 74 -2.1 -5.04175 | CTTTTTTGCGACATG GTGTG CTCTA CATAC TTTTTCTGTGCTTCG Paes_0611 651866 - 652609 + | phosphoglycerate mutase 1 family TERM 781 653062 - 653082 + G 70 -5.3 -4.39696 | overlap 653063 ATCTGCCGCCAGATG GTTCAGGCC GAG GGCCAGAAA TTTCTTGGTTTCAGA TERM 782 653150 - 653163 + G 82 -3.1 -5.24129 | overlap 653148 CCAAAGCCCAGGAGC CTGTT GTCA AGCAG TTTTTTGTGGCAAAA TERM 783 655618 - 655604 - g 78 -7.8 -4.36262 | AGATTCAGATCAAAA TGGCCC AGG GAGCCA AGCCTGGTGAAGGCG Paes_0612 652705 - 657324 + | Glutamate synthase (ferredoxin) TERM 784 657444 - 657420 - g 72 -10 -3.3636 | opp_overlap 657422, overlap 657415 657418 TTAGAGTATAGAAGA GAGGTTCCCT CCGAC AGGGAGCCTC TTGAGAGAATCAAGG Paes_0613 657384 - 658859 + | glutamate synthase, NADH/NADPH, small subunit TERM 785 658950 - 658938 - g 76 -7.7 -4.20696 | TCAGGAACTCGAAAA GACAG AAA CTGTC GATGTGAAAACCGGT TERM 786 659013 - 659002 - g 70 -5.8 -4.19472 | GAAGATATCGGAAAA CTCG TTCG CGAG GAATCATCGATAGAG Paes_0614 658882 - 659151 + | hypothetical protein TERM 787 659598 - 659587 - g 74 -2.2 -5.08824 | TTGTCATTGAAAAAA GCAA TATT CTGC TTATCGGCCCAACGG Paes_0615 659193 - 660512 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 788 660656 - 660680 + F 100 -10.8 -5.40004 | opp_overlap 660656 ACAAGACCTGTAAAA GCCTGCAAAT AAAGA GTTTGCAGGC TTTTTTCGTTTCCTC TERM 789 660680 - 660656 - f 82 -10.1 -4.14874 | opp_overlap 660656 ACAAGACCTGTAAAA GCCTGCAAA TAAAGAG TTTGCAGGC TTTTTTCGTTTCCTC TERM 790 660748 - 660777 + F 77 -4.9 -4.92783 | opp_overlap 660751, overlap 660751 AGCGTTTTTTATATT AAATCTGCGACGT ATAT GCGACGCGGATTG TTTTTCTCATCCCTT TERM 791 660751 - 660774 + F 77 -6.6 -4.56153 | opp_overlap 660751, overlap 660748 GTTTTTTATATTAAA TCTGCGACGT ATAT GCGACGCGGA TTGTTTTTCTCATCC Paes_0616 660806 - 661990 + | integrase family protein TERM 792 662077 - 662063 - T 73 -10 -3.01712 | opp_overlap 662051 TCTGCTCTGCGAACA GGATCG CAA CGATCC TGAGGCCGAACTTCC TERM 793 662856 - 662871 + T 70 -6 -4.21402 | overlap 662857 GCAAAGGGGGAGCCG ACCGGC AGGA GCCGGA TTTGTACTTTTGACT TERM 794 662857 - 662870 + T 71 -9.5 -3.11757 | overlap 662856 CAAAGGGGGAGCCGA CCGGC AGGA GCCGG ATTTGTACTTTTGAC Paes_0618 663272 - 662913 - | hypothetical protein Paes_0619 663469 - 664488 + | NMT1/THI5 like domain protein TERM 795 665026 - 665036 + G 70 -4 -4.70659 | TGATCGAGATGATCA CAAT GAT ATTG TTTTTGACTATACAC TERM 796 665182 - 665166 - g 75 -7.3 -4.43309 | TAACCGGAATTAAAA GAGCAAT CCA ACTGCTC AAAAGATCGCCTGAT Paes_0620 664493 - 666016 + | nucleotide-binding protein containing TIR -like protein domain-like protein TERM 797 666681 - 666662 - g 73 -3.5 -4.75288 | gap 1 TTACACGAAAACAAA CGCAGCCC GGTAG AGGC-GCG AAAGTCACTAAAGTT Paes_0621 666020 - 666760 + | ABC transporter related TERM 798 666790 - 666803 + G 71 -2.4 -4.92812 | overlap 666790 GTTATCTTCGCCCCG TACC CTTGGT GGTA TTTGTTTTGTTCTGG Paes_0622 666744 - 667517 + | binding-protein-dependent transport systems inner membrane component Paes_0623 667514 - 668338 + | hypothetical protein TERM 799 668499 - 668459 - f 73 -2.6 -5.055 | opp_overlap 668459 668464, overlap 668460 668462 668464 CGAATCCCTAAAAAA CTATACCCCGTTTGACC-CC TAT GGTGGTTGAACGGGGT-TAC TTGTTTGTGCGAGAT TERM 800 668459 - 668499 + F 70 -7 -4.06687 | opp_overlap 668459 668460 668462 668464, overlap 668464 CGAATCCCTAAAAAA CTATACCCCGTTTGACC-CC TAT GGTGGTTGAACGGGGT-TAC TTGTTTGTGCGAGAT TERM 801 668495 - 668464 - f 72 -9.4 -3.25177 | gap 1, opp_overlap 668459 668464, overlap 668462 668460 668459 CCCTAAAAAACTATA CCCCGTTTGACC-CC TAT GGTGGTTGAACGGGG TTACTTGTTTGTGCG TERM 802 668464 - 668495 + F 100 -13.8 -3.65699 | gap 1, opp_overlap 668464 668462 668460 668459, overlap 668459 CCCTAAAAAACTATA CCCCGTTTGACC-CC TAT GGTGGTTGAACGGGG TTACTTGTTTGTGCG Paes_0624 668553 - 668903 + | DNA binding domain protein, excisionase family Paes_0625 668959 - 669657 + | cobyrinic acid a,c-diamide synthase Paes_0626 669654 - 669920 + | hypothetical protein TERM 803 670089 - 670038 - g 95 -15.3 -3.04461 | gap 1, opp_overlap 670030 GATTGATGGGCAAGA TCGCCCTTGTCGATGACGGTAGCC TCATC GGCTACCA-CATCGTCAACGGCAA CCGGGAACGTGCGTT TERM 804 670195 - 670215 + G 70 -4.6 -4.46155 | overlap 670196 GACACGCTCACGGTT CCGGGCAG GAAAG CTGCTCGC TTTTCTCAATCTGTG Paes_0627 669917 - 670357 + | hypothetical protein TERM 805 670698 - 670714 + GT 91 -7.9 -5.08824 | opp_overlap 670697 AACCGTTGATCGAAC CGGCCAG CCG CTGCCCG TTTTTTCGATCAACC Paes_0629 672139 - 670904 - | RNA-directed DNA polymerase (Reverse transcriptase) Paes_0628 670345 - 671007 + | putative conjugal transfer protein TraF TERM 806 671407 - 671393 - Gf 72 -7.8 -3.89346 | CTTGCAGTCCACAAA GCGCTG TTT CAACGC TGCCATCAGTTCTTC Paes_0631 672562 - 672819 + | hypothetical protein TERM 807 674201 - 674175 - g 70 -3.7 -4.67755 | overlap 674176 AGAGGCAGGTAAAAA CGGCGGTAA ATATGACCG TCACCGCCA TCTGAAGGAACTCGA TERM 808 674693 - 674663 - g 83 -12.4 -3.36327 | GCATTGCATCCAGAA CCGGCGCGTCGCTC AAA GAGCTGCCCGCCGG AGGGATAATGAGCGG Paes_0632 672973 - 674904 + | hypothetical protein TERM 809 675408 - 675432 + F 72 -7.9 -3.9151 | gap 1, overlap 675407 AGCACGGACGGGAAC TGCTCC-GCC ATCACG GGCCGGAGCA TGTTTTCTGCTTTGC TERM 810 676811 - 676787 - f 82 -7.1 -4.62783 | CAGGCATTGCAAAAA CCTGCTCAATC ATT GATTGACCGGG GTGCAGGAAAGTGCA TERM 811 677304 - 677320 + F 93 -12.3 -3.53174 | overlap 677295 CGACGTGACGGCGCT CGCCGAA GCG TTCGGCG TCTTTGTGCAGCTCT Paes_0635 677556 - 677651 + | hypothetical protein Paes_0636 677701 - 678336 + | hypothetical protein Paes_0637 678336 - 678902 + | hypothetical protein TERM 812 679293 - 679282 - gf 91 -3 -5.59564 | AGAAATTGAAAAAAA GAAT GCTG ATTC GGTTGTTAGTTTTAC TERM 813 679453 - 679438 - gf 74 -3.4 -4.92385 | opp_overlap 679438 TATACTTAAAGAAAA TAATTT ATGG AAATTA ATGTTATCAGCAGAT Paes_0638 678899 - 679657 + | hypothetical protein Paes_0639 679632 - 679991 + | hypothetical protein TERM 814 680439 - 680451 + GF 72 -7.7 -3.85969 | opp_overlap 680439 680438 CGACCTAGCATCAAC TGGCT GTG AGCCA TTGTCTATTTCTTTG Paes_0640 680182 - 681297 + | AIR synthase related protein domain protein Paes_0641 681257 - 681751 + | deoxyUTP pyrophosphatase Paes_0642 682090 - 681809 - | integrase, catalytic region TERM 815 683444 - 683463 + r 76 -7.8 -4.18018 | opp_overlap 683441, overlap 683441 TTTGGTTATCAACTC CCGGGG TGTGTTTT CCCCGG TTTTCCGTCACACGC TERM 816 683547 - 683520 - R 78 -10.6 -3.18912 | opp_overlap 683516 683515 683546 CGAGTGAGTCAGTAA CCACTGCAATGC TTTT ACTTTGCAGTGG CGACCTTCCTGTGTT Paes_0644 684120 - 683926 - | hypothetical protein Paes_0645 684949 - 684170 - | conserved hypothetical transposase Paes_0646 685464 - 684979 - | transposase IS3/IS911 family protein Paes_0647 685990 - 686136 + | hypothetical protein TERM 817 686178 - 686208 + T 86 -10.6 -4.09108 | overlap 686179 686204 TAAATATATTTATGA TTCTGCAAAATGTC TTT GAGATTTTGCAGAG TTTCTGTGGGTTAAA TERM 818 686179 - 686207 + T 81 -11.9 -3.04983 | overlap 686178 686204 AAATATATTTATGAT TCTGCAAAATGTC TTT GAGATTTTGCAGA GTTTCTGTGGGTTAA TERM 819 686223 - 686248 + T 74 -6.7 -4.36554 | opp_overlap 686224 686226, overlap 686214 686226 GTTTCTGTGGGTTAA ATACCCCGCTG CTTG CGGCGGGGTTC TTTATTGTCATAGTG TERM 820 686245 - 686226 - T 80 -10.6 -3.34398 | opp_overlap 686214 686223 686226, overlap 686224 TCTGTGGGTTAAATA CCCCGCTG CTTG CGGCGGGG TTCTTTATTGTCATA TERM 821 686226 - 686245 + T 100 -12.8 -4.29119 | opp_overlap 686226 686224, overlap 686214 686223 TCTGTGGGTTAAATA CCCCGCTG CTTG CGGCGGGG TTCTTTATTGTCATA Paes_0648 686642 - 686256 - | hypothetical protein TERM 822 686728 - 686755 + r 87 -4.8 -5.40474 | GATGTTTCTAAGCCC TGCGCTTTATGT CAAC ACAGATGGCGCA TTTTTTTAAAAAAAT Paes_0649 687758 - 686775 - | Integrase catalytic region Paes_0650 688273 - 687788 - | transposase IS3/IS911 family protein TERM 823 687849 - 687865 + g 71 -3 -4.87291 | gap 1, opp_overlap 687846, overlap 687848 AACACTAACAGAGCC GCTGCTT CGGC AAGC-GC TTTTTCCTTGCGCTG TERM 824 689136 - 689117 - g 78 -7.8 -4.30014 | opp_overlap 689129, overlap 689129 GCGAGTAACGGAAAA CCGGGG AAAACACA CCCCGG GAGTTGATAACATCA TERM 825 689379 - 689344 - g 77 -8.2 -4.06419 | overlap 689345 CTGTTGCAGAAACAA CCGCTGACCTGAACTC TTAC GGGTTCAGGCCAGAGC GCTCAACGGCTGATG TERM 826 689378 - 689345 - g 75 -11.7 -3.0353 | overlap 689344 TGTTGCAGAAACAAC CGCTGACCTGAACTC TTAC GGGTTCAGGCCAGAG CGCTCAACGGCTGAT TERM 827 689993 - 689982 - g 74 -5.8 -4.44461 | opp_overlap 689981 AACAAGGCTACAAAA CAGG TGCA CCTG ATTGGCTATCTCAAC TERM 828 690237 - 690215 - g 83 -12.1 -3.31144 | opp_overlap 690219, overlap 690219 GGTCGATCCTCAGAA GAAACAGCG GTTAA CGCTGTTTC TCGAAGGGAGTACAC TERM 829 690233 - 690219 - g 75 -7.1 -4.31433 | opp_overlap 690219, overlap 690215 GATCCTCAGAAGAAA CAGCG GTTAA CGCTG TTTCTCGAAGGGAGT Paes_0651 688908 - 690380 + | RNA-directed DNA polymerase TERM 830 690444 - 690463 + T 87 -13.6 -3.01712 | GGTTCTTAGGGGACG GCGGTGCA GCAA TGCACCGC TGTTACCCGACAACA TERM 831 690809 - 690776 - T 100 -12.7 -4.82901 | opp_overlap 690784, overlap 690777 CTCCGCCGACAAAAA CGATGAAATATGCCA TGTG TGACATATTTCATCA CCTGTAAAAATATCT TERM 832 690808 - 690777 - T 100 -14 -3.49419 | opp_overlap 690784, overlap 690776 TCCGCCGACAAAAAC GATGAAATATGCCA TGTG TGACATATTTCATC ACCTGTAAAAATATC Paes_0653 693384 - 690823 - | aminopeptidase N TERM 833 690894 - 690904 + g 82 -3.2 -5.24531 | overlap 690884 TCAGGTCGTCGGCTT GTTC GAT GAGC TTTTTTCTGAGCAAT TERM 834 691185 - 691196 + g 70 -5.8 -4.19735 | opp_overlap 691184 691185 ATGGTTCTGTAAAAG CCTG CCAG CAGG TTTCCTTTTCAGCGC TERM 835 692505 - 692518 + g 79 -3.8 -5.06414 | TGGCGCGGTTCAGGT GCTC GCTGTA GAGC TTTTTATTGCGGAAG Paes_0654 694028 - 693516 - | protein of unknown function DUF1648 TERM 836 693999 - 694010 + g 74 -2.2 -5.05606 | GGCCAACAGCGCGAT CGCT AATG AGTG TTTCTTTTTGTTGGG TERM 837 694040 - 694051 + H 74 -2.2 -5.29445 | overlap 694023 GCATTGCGGGGGATG TCCT TTAC GGGA TTTTTGTTATTGACG Paes_0655 694312 - 694956 + | hypothetical protein TERM 838 695169 - 695194 + G 70 -9.7 -3.21395 | overlap 695173 AGCCTCGATGTTCTG GCAACGCTGCC AGAA GGCAGTGTTCC TCTTATGGACCCGGT Paes_0656 694953 - 695357 + | hypothetical protein TERM 839 695744 - 695755 + T 74 -2.2 -5.27779 | GCGCATCGAGCAGTG TCGT GAAT GCGA TTTTTTCCTGTTCGA Paes_0658 696328 - 696008 - | hypothetical protein TERM 840 696685 - 696672 - R 72 -8.1 -3.97139 | TAATCCGAAGAACAA TGCGG CATC CCGCA TGGTGACATACCTGG Paes_0660 697328 - 696783 - | hypothetical protein TERM 841 697122 - 697139 + g 73 -4.1 -4.82901 | GAGCTCTACGACTTC GAAGTTC CAGA GACCTTC TTTTTCTCCGGCAGG Paes_0661 697720 - 697400 - | hypothetical protein TERM 842 697505 - 697524 + g 79 -2 -5.17576 | overlap 697506 697507 TTTCATGTTCGGGAG TTGGCGCA GATA TGCGGCGG TTTTTTCGGTTGCTG Paes_0662 699286 - 697811 - | hypothetical protein TERM 843 699722 - 699735 + H 88 -3.7 -5.47218 | opp_overlap 699715 ATACATTACAGGGGA GCGCC TGAG GGAGC TTTTTTTGAGTGCAA Paes_0663 699823 - 700209 + | hypothetical protein TERM 844 700249 - 700264 + F 71 -9 -3.33261 | opp_overlap 700248 TTGCACATCCAAATC GCAGCA TTGT TGCTGC TTGTCGGGATTCGGG Paes_0664 700433 - 700756 + | hypothetical protein TERM 845 701235 - 701256 + G 70 -7.3 -4.09739 | opp_overlap 701237, overlap 701237 CCAGCCGTGTTGTAA CAGTGAGCA GCGG TGCTCACTA TTTTGGCAAGCTTGA TERM 846 701237 - 701254 + G 77 -9.9 -3.64488 | opp_overlap 701237, overlap 701235 AGCCGTGTTGTAACA GTGAGCA GCGG TGCTCAC TATTTTGGCAAGCTT Paes_0665 700787 - 701692 + | short-chain dehydrogenase/reductase SDR TERM 847 702127 - 702140 + G 71 -2.3 -4.95547 | overlap 702128 GATCTGGTTCTTGAG TCCGG GCTT TCGGG TTTTCTTCTTCTCGC Paes_0666 701773 - 703320 + | hypothetical protein TERM 848 703646 - 703673 + G 84 -4 -5.1925 | opp_overlap 703647, overlap 703647 TCGCATTTCGCAAGG ACTCTGGTGCGG GCAT TCGGGCCAGAGG TTTTTTCGGTTATCG Paes_0667 703322 - 705508 + | helicase, RecD/TraA family Paes_0668 705853 - 708240 + | ribonuclease R TERM 849 708306 - 708279 - T 90 -12.8 -3.28712 | gap 1, opp_overlap 708279 TTTTTTTCGTGATAA GCCCGGTTA-GCC AAG AGCGTAACCGGGC TTTTTTTATCAGTCG TERM 850 708279 - 708306 + T 100 -12.1 -5.64274 | gap 1, opp_overlap 708279 TTTTTTTCGTGATAA GCCCGGTTA-GC CAAGA GCGTAACCGGGC TTTTTTTATCAGTCG Paes_0669 709475 - 708315 - | sodium/hydrogen exchanger Paes_0671 713002 - 710429 - | multi-sensor hybrid histidine kinase TERM 851 711624 - 711659 + g 100 -5.7 -5.67967 | overlap 711625 AGTTTGGAGTGGAAT G-TTCTCGTTGTTGCAT TATC AT-CGACAACGAGAATC TTTTTTTCTGATAGT TERM 852 711625 - 711657 + g 90 -9.4 -4.47611 | gap 1, overlap 711624 GTTTGGAGTGGAATG TTCTCGTTGTTGCAT TATC AT-CGACAACGAGAA TCTTTTTTTCTGATA TERM 853 712558 - 712545 - G 71 -3.1 -4.86731 | overlap 712549 CTGCCGTAAAGAAAA GAGAC AGAG ATCTC TGCGGCAGCATATGC TERM 854 714102 - 714118 + G 90 -10.1 -4.36649 | TCTTGCCAAAGCGTT TGCCGGC CGT GCTGGCA TTATTTTCTGCTCTG Paes_0672 713341 - 714585 + | aminotransferase class I and II TERM 855 714712 - 714744 + T 85 -10.6 -3.85698 | opp_overlap 714712 714719, overlap 714718 CGCCCTGAACGCAAA GTAAAAACCCCCGC ATGAA GCGAGGGCTTTTAC TTTGTGCGGAGAGGG TERM 856 714744 - 714712 - T 100 -15 -3.75153 | opp_overlap 714712 714718, overlap 714719 CGCCCTGAACGCAAA GTAAAAACCCCCGC ATGAA GCGAGGGCTTTTAC TTTGTGCGGAGAGGG TERM 857 714737 - 714719 - T 93 -9.5 -5.01042 | opp_overlap 714718 714712, overlap 714712 AACGCAAAGTAAAAA CCCCCGC ATGAA GCGAGGG CTTTTACTTTGTGCG TERM 858 714883 - 714864 - T 100 -5 -5.7946 | opp_overlap 714864 GTTGCAACAAAAAAA GCCTCT TGTTTATC AGAGGC TTTTTTTGTTTTGAG TERM 859 714864 - 714883 + T 100 -5 -6.09196 | opp_overlap 714864 GTTGCAACAAAAAAA GCCTCT TGTTTATC AGAGGC TTTTTTTGTTTTGAG Paes_0673 716241 - 715039 - | tryptophan synthase, beta subunit TERM 860 715172 - 715196 + g 70 -3.5 -4.62904 | overlap 715173 ATGGCGTGGGCTGAT TCGAGGGCG CAGATGA TGCCTTCGG TTTTTGCAAGTGTTT TERM 861 715873 - 715848 - G 72 -11.1 -3.04263 | gap 1 AGTCCAGGTTGAAGA GGGCGCAGACCG TCG CGGTC-GCGACC CCATGCTGACCTGCT TERM 862 715970 - 716018 + g 72 -4.6 -4.68384 | gap 1, opp_overlap 715985, overlap 715972 TTGATTTTATGCGCT CCGGTGTGGCAGAGATCTT-CTC GTTT GAGGAAGATTTTTGCACCGCCTG TTTTCTTCGATAGGT TERM 863 716832 - 716809 - g 70 -6 -4.18018 | gap 1, opp_overlap 716807 716809 716810, overlap 716811 716812 GGGTTTGACCGAAAA CATCTCATCGG AGA CCGATGAGG-G CTATTATAGCGGAGA TERM 864 716831 - 716811 - g 77 -9.7 -3.69216 | opp_overlap 716810 716809 716807, overlap 716809 716812 GTTTGACCGAAAACA TCTCATCGG AGA CCGATGAGG GCTATTATAGCGGAG TERM 865 716830 - 716812 - g 81 -13.2 -2.81208 | opp_overlap 716810 716809 716807, overlap 716811 716809 TTTGACCGAAAACAT CTCATCGG AGA CCGATGAG GGCTATTATAGCGGA TERM 866 717979 - 718008 + G 70 -3.6 -4.61231 | gap 1 CGATGATGGTGATGT TGTGACCTCTACA ACCGA TG-AGCGGTCGCA TTTTTCCAGCTATGG Paes_0674 716342 - 719062 + | hypothetical protein Paes_0675 719951 - 719079 - | alpha/beta hydrolase fold Paes_0676 720091 - 720504 + | transcriptional regulator, BadM/Rrf2 family TERM 867 722815 - 722846 + G 70 -7.2 -4.06004 | TATTCTCTCAAACGC GACTGGCTTTGGCC AAGG GGTGGAAGCCAGGC TATTTTTCATTCAAT Paes_0677 720642 - 723512 + | excinuclease ABC, A subunit Paes_0678 723789 - 723502 - | hypothetical protein Paes_0679 724028 - 724315 + | chaperonin Cpn10 TERM 868 725090 - 725078 - g 74 -3.3 -5.00616 | overlap 725079 CTGTGCTCGAAAAAA CCGCA CAG TCCGG CCGTCCGCTGATGAT TERM 869 725481 - 725491 + G 72 -8.2 -3.78034 | overlap 725479 TGCAAAACTCTCAGG CGGC GTT GCCG TTCTTAATATCGGTG Paes_0680 724360 - 726009 + | chaperonin GroEL TERM 870 726044 - 726069 + F 100 -16.2 -5.66229 | TTGTGCATATTTCAA GGCCGCTCCT CTTTGC AGGAGCGGCC TTTTTTATTGTTACT Paes_0681 726138 - 726818 + | exsB protein TERM 871 727406 - 727416 + G 70 -6.8 -4.13945 | overlap 727408 GAACGTTCTCTGATG GCCA TGA TGGC TTTTCCCATCGGGAT Paes_0682 726863 - 727552 + | Abortive infection protein Paes_0683 727573 - 728376 + | tryptophan synthase, alpha subunit TERM 872 728460 - 728496 + G 75 -11.7 -2.95476 | gap 1, opp_overlap 728481, overlap 728462 TGAGCGCTGCCTTGA GGCTCTG-GACCAGGA ACGATA TCCTGGTCTCAGGGTC TGTGTGGTCGATAAT TERM 873 728462 - 728494 + G 72 -10.7 -3.02947 | gap 1, opp_overlap 728481, overlap 728460 AGCGCTGCCTTGAGG CTCTG-GACCAGGA ACGATA TCCTGGTCTCAGGG TCTGTGTGGTCGATA TERM 874 729199 - 729214 + G 70 -4.6 -4.55721 | overlap 729201 ATCCGTCTTTTTCTC GAGCTG GCGG CAGCGC TTTTCTATACAGTTT Paes_0684 728380 - 729432 + | glycosyl transferase family 2 Paes_0685 730447 - 729401 - | NAD-dependent epimerase/dehydratase TERM 875 729940 - 729963 + g 70 -3.7 -4.68994 | GCTCCTGCATGAACT CCCATGCGG CCCGCT CGGCAAGGG TTTTTGAGTAGTGAT TERM 876 730264 - 730301 + g 74 -7.7 -4.07568 | gap 1, opp_overlap 730245, overlap 730263 GGGAGAGCAGATCGG CCTCGAT-GAGCTCCAGG CGT TCTGCCGCTCCGTCGAGG TTTTCAAGAAACCGG TERM 877 730367 - 730378 + g 74 -2.2 -5.15634 | CCGTACAGCGTAGCC CTGT TGCA GCAG TTTTTTGATCAGATG Paes_0686 731009 - 730449 - | cyclase/dehydrase Paes_0687 731579 - 731022 - | cyclase/dehydrase Paes_0688 732907 - 731711 - | drug resistance transporter, Bcr/CflA subfamily Paes_0689 734357 - 732975 - | Methionine adenosyltransferase TERM 878 733473 - 733484 + g 70 -4.4 -4.55673 | GTAATTGATGAACTG GACA AGGT TGTC TTTTATAATCTCTTT TERM 879 735462 - 735486 + G 72 -10.1 -3.29829 | opp_overlap 735433 735462, overlap 735433 GCGTGTGTCGAACAA GCACGGAAATA CCA TATTTCCATGC TTGTCGAACAGTATG TERM 880 735486 - 735462 - g 88 -12.3 -3.61398 | opp_overlap 735433 735462, overlap 735433 GCGTGTGTCGAACAA GCACGGAAATA CCA TATTTCCATGC TTGTCGAACAGTATG Paes_0690 734397 - 735554 + | glycosyl transferase group 1 Paes_0691 736576 - 735548 - | cell shape determining protein, MreB/Mrl family TERM 881 735618 - 735661 + g 76 -3.9 -4.95484 | ACCGTGCCTGTTCCT CTTG-CAACCGCAGTCAGCGG ATCT TCGCTGA-TGTGGACGGCAAG TTTTGTTTCGTCATG TERM 882 736149 - 736168 + g 72 -10 -3.28924 | overlap 736141 736153 ACATCGATGCCGATG CCGATGGC TGCG GCCATTGG TTCTGCAACCAGGTA Paes_0692 736727 - 736825 + | hypothetical protein Paes_0693 736871 - 738157 + | Histidinol dehydrogenase Paes_0694 738154 - 739179 + | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 883 739570 - 739589 + G 72 -6.4 -4.42653 | overlap 739557 CCCGGTGTTGATGAT GCCGCTTT CGAA AAAGCAGC TTTTCTCGATCAAAT TERM 884 739915 - 739892 - g 77 -3.1 -5.03145 | overlap 739893 CAATTGCCGAAAAAA TGACCCTGA CCGTGT TCAAGGTCC CTGGTGAAACCAATA TERM 885 741084 - 741064 - g 84 -4 -5.24531 | ACGGTCGAGAAAAAA GGCAAGAA AAATA TTTTTGCC GGCAGGATTCTTGAA Paes_0695 739387 - 741954 + | aconitate hydratase 2 TERM 886 742028 - 742051 + F 77 -2.4 -5.35815 | overlap 742040 ACATATTCCGCCTGT CAGTGAGCTT TTGA AAAATCACTG TTTTTCTTTAATATA TERM 887 742126 - 742140 + G 81 -5.8 -4.82678 | ATCGGAATTTTATCA TGAAAA AGC TTTTCA TTTTCCTTTTTCTCG Paes_0696 742125 - 742403 + | hypothetical protein TERM 888 742424 - 742467 + F 80 -12.1 -2.91276 | gap 1, opp_overlap 742434, overlap 742434 GGTTTTTGCTGTTGA CACACAAAAA-GGAGATAAG GTATG CTTATCTCCTTTTTTTTGTG CTTTATGAAAAGCGG TERM 889 742456 - 742434 - f 100 -10.7 -5.03994 | opp_overlap 742434 742424 GTTGACACACAAAAA GGAGATAAG GTATG CTTATCTCC TTTTTTTTGTGCTTT TERM 890 742434 - 742456 + F 100 -10.7 -6.04378 | opp_overlap 742434, overlap 742424 GTTGACACACAAAAA GGAGATAAG GTATG CTTATCTCC TTTTTTTTGTGCTTT Paes_0697 742550 - 742960 + | hypothetical protein TERM 891 743246 - 743220 - T 100 -11.7 -5.1244 | GCAGCAATAGAAAAA GCCTTGTAACA TATGC TGCTACAAGGC TTCCAGAGTGCTGAG TERM 892 743474 - 743451 - T 74 -11 -2.62396 | opp_overlap 743451, overlap 743453 TACGGGTGCATACGA GAGCGGCAGT TTTT ACTGTCGCTC TTTTTTCTGTAGCGT TERM 893 743451 - 743474 + T 100 -13.2 -5.37043 | opp_overlap 743451 743453 TACGGGTGCATACGA GAGCGGCAGT TTTT ACTGTCGCTC TTTTTTCTGTAGCGT TERM 894 743514 - 743530 + T 71 -10.1 -2.78596 | TCGAACCCGTGATCT CCGCCTT GAG AGGGCGG TGTCCTGGGCCACTA Paes_0698 745015 - 743738 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 895 745845 - 745857 + G 100 -4.8 -5.96219 | AGGCAATTATGCGCG CCCA ATACA TGGG TTTTTTTTCTCAGTC Paes_0699 745460 - 746662 + | Peptidase M23 TERM 896 747160 - 747183 + G 75 -4.4 -4.82901 | overlap 747154 CGCTTCAGTTTGCCC CGGCCGGTGC GATG GTTTTGGCCG TTTTTCTGCAACGGG Paes_0700 746670 - 747224 + | hypothetical protein Paes_0701 747231 - 748067 + | NAD+ synthetase Paes_0702 749672 - 748077 - | L-aspartate oxidase TERM 897 748600 - 748612 + g 71 -3.3 -4.82901 | TTGATTGAGCTGCGT CCTAC ATC GTCGG TTTTTATGCCGCCGC TERM 898 748797 - 748847 + g 81 -4.6 -5.1675 | opp_overlap 748816, overlap 748802 748814 748816 TTTCATTTCAGAGTC TATAGCCCGGGCGACGATATCGCG GGG CGCGAGATTTTCTCTGGGGTCATA TTTTTTCATGAATGC TERM 899 748814 - 748830 + g 74 -6.5 -4.54047 | opp_overlap 748816, overlap 748802 748797 748816 TAGCCCGGGCGACGA TATCGCG GGG CGCGAGA TTTTCTCTGGGGTCA Paes_0703 750642 - 749692 - | protein of unknown function DUF368 TERM 900 749803 - 749787 - G 72 -7.9 -3.85864 | opp_overlap 749796 CCATGAGCAGAATAA CCGGCAG GAG CTGCGGG TCGGCATTGGTCATG Paes_0704 751280 - 750672 - | SNARE associated Golgi protein TERM 901 751375 - 751340 - R 100 -3.2 -6.15717 | opp_overlap 751344, overlap 751329 751342 GAAAGAGAAAAAAAA CGTCTTCCTCCTGC GTTGTTCT GCAGGAGGAATTTG TTGTACGATCTTACG TERM 902 751344 - 751371 + r 95 -12.1 -4.32579 | opp_overlap 751329 751342 751340 GAGAAAAAAAACGTC TTCCTCCTGCG TTGTTC TGCAGGAGGAA TTTGTTGTACGATCT Paes_0705 751945 - 751400 - | arginine decarboxylase, pyruvoyl-dependent Paes_0706 753235 - 752015 - | tyrosyl-tRNA synthetase Paes_0707 753726 - 753253 - | SsrA-binding protein TERM 903 753298 - 753327 + g 100 -3.7 -5.79588 | overlap 753299 753322 ACGCTCCGCATCCCT GTTTTTGATAGAC TCTC GTTTATCGAAAAG TTTTTTTCCTTTTGC TERM 904 753299 - 753326 + g 70 -7.2 -4.05313 | overlap 753298 753322 CGCTCCGCATCCCTG TTTTTGATAGAC TCTC GTTTATCGAAAA GTTTTTTTCCTTTTG Paes_0708 755223 - 753742 - | D-lactate dehydrogenase (cytochrome) Paes_0709 757135 - 755213 - | penicillin-binding protein 2 TERM 905 755350 - 755370 + g 74 -9.7 -3.44443 | TGTCGGACGTTATGG CTGCGGTTG AAT CGACTGCAG TTGCTGTTGTGTCGG TERM 906 756446 - 756460 + g 72 -5 -4.63542 | GAGGTCGTTGCCATT GATGAA GGG TTCGTC TTTTTGACCATTCTC Paes_0710 757633 - 757139 - | rod shape-determining protein MreD TERM 907 757573 - 757558 - G 72 -7.6 -3.95435 | CGCCGTAAAATACAA TATGCG ATGC CGCATA GAGCTGAATGCCGTA Paes_0711 758496 - 757666 - | Rod shape-determining protein MreC TERM 908 758583 - 758618 + r 77 -11.2 -2.80816 | opp_overlap 758587 758588, overlap 758587 758588 CGTTCGTCGGTGCTC GAAATCCTCATCCCGA CTTG TCGGGATTCGGGTTTC TGTGCTCCGTCGGCC Paes_0712 759572 - 758667 - | cation diffusion facilitator family transporter Paes_0713 759863 - 760243 + | chaperonin Cpn10 Paes_0714 760300 - 761268 + | quinolinate synthetase complex, A subunit TERM 909 761304 - 761349 + F 76 -8.2 -4.24786 | overlap 761310 GTCGCCTGAAGTTTT TTTGATGGGTGCTGCTGGTG TGTATC CGCCTGCAGCACCCTTTGCA TTTCTGTGTTCTCAG TERM 910 761310 - 761343 + G 100 -16 -3.92005 | overlap 761304 TGAAGTTTTTTTGAT GGGTGCTGCTGGTG TGTATC CGCCTGCAGCACCC TTTGCATTTCTGTGT TERM 911 761525 - 761507 - g 79 -4.5 -4.95547 | opp_overlap 761510, overlap 761510 TTTATAATAATAAAA TAAGGGC TTTCG GCCCTTT TTTGAGTTACATTTT TERM 912 761522 - 761510 - g 74 -6.2 -4.55653 | opp_overlap 761510, overlap 761507 ATAATAATAAAATAA GGGC TTTCG GCCC TTTTTTGAGTTACAT TERM 913 761510 - 761522 + G 90 -6.9 -5.16572 | opp_overlap 761510 761507 ATAATAATAAAATAA GGGCT TTC GGCCC TTTTTTGAGTTACAT Paes_0715 761308 - 761595 + | hypothetical protein TERM 914 761843 - 761829 - g 87 -4.3 -5.24531 | overlap 761834 ATCCGGGATAAAAAA GGTAA TCCTG TTACC GGAAGCGAAAATTCC TERM 915 762125 - 762140 + G 81 -10.4 -3.89822 | CGCATACAGCCGACC GCAGGC TCAC GCCTGC TTTATCCAGTCGGTC TERM 916 762811 - 762796 - g 77 -10.4 -3.61609 | TCAGGGAAAGGACAA CGGGCA AGAG TGCCCG ATCGGTCAGAGCAAG TERM 917 764018 - 764038 + G 83 -13.3 -3.02511 | overlap 764022 CGGTACTATGACTAT CGAGGGTGC GCC GCACCTTCG TCTTGAACACCTGCC TERM 918 764836 - 764820 - g 81 -7.3 -4.63542 | overlap 764828 GAGAAGGCTGAAAAA GCTGAAA ACC CTTCAGC TAACGGCCATGATCC TERM 919 764906 - 764888 - g 95 -5.9 -5.42265 | overlap 764890 TGAAACGACAAAAAA GGCGGCA GCTCA TGCCGGC CACGAGCATGGCGGG Paes_0716 761592 - 765062 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 920 765103 - 765123 + T 100 -16.9 -4.66163 | opp_overlap 765096 GTAACTGACGTCGAA GGGCACCGT TTT ACGGTGCCC TTTTTGCGTGGCAGT Paes_0717 765898 - 765149 - | ABC transporter related Paes_0718 766977 - 765961 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 921 766856 - 766869 + g 82 -3.1 -5.20333 | opp_overlap 766843 AGCGCTTCAGCCGAG CCGAT AACG ATTGG TTTTTCTTCTGGCTG Paes_0719 767444 - 766977 - | hypothetical protein Paes_0720 768781 - 767507 - | Three-deoxy-D-manno-octulosonic-acid transferase domain protein TERM 922 769377 - 769367 - g 74 -2.4 -5.03314 | TGGATCGGGAAAAAA GCCG TAT CGTC GAGCTGGAAGATAAC Paes_0721 768814 - 769590 + | hypothetical protein Paes_0722 769972 - 771795 + | DEAD/DEAH box helicase domain protein TERM 923 771872 - 771910 + G 70 -3.8 -4.63218 | opp_overlap 771879, overlap 771874 771879 TTCACTGTCATCGGA AAAAAAACCTGGGGGCTA TAC TGGTCTCCAGGTTTTCGG TTTTGTTGCCGCAGG TERM 924 771903 - 771879 - g 100 -4.1 -5.78622 | opp_overlap 771874 771872 771879 TCATCGGAAAAAAAA CCTGGGGGCTA TAC TGGTCTCCAGG TTTTCGGTTTTGTTG TERM 925 771879 - 771903 + G 95 -10.7 -4.4836 | opp_overlap 771879, overlap 771874 771872 TCATCGGAAAAAAAA CCTGGGGGCTA TAC TGGTCTCCAGG TTTTCGGTTTTGTTG TERM 926 771913 - 771951 + G 100 -5.3 -5.63236 | gap 1, overlap 771914 TCCAGGTTTTCGGTT TTGTTGCCGCAGGGGTCG TAGC CG-CTATTGTGGCAACAG TTTTTGTTTTTCGCT TERM 927 772453 - 772436 - g 84 -3.5 -5.24129 | gap 1, overlap 772438 TGGCGGGATAAAAAA TG-TCGAT CTT ATCGAACA GTATGGTGGCGGTCC Paes_0723 771846 - 772550 + | hypothetical protein Paes_0724 772571 - 773041 + | hypothetical protein TERM 928 773036 - 773053 + F 79 -4.2 -5.22312 | AGGAGCGTCTCTTCG TCATGA CAGTCA TCATGA TTTTTTCCTGTCAGT Paes_0725 773203 - 774636 + | hypothetical protein TERM 929 775918 - 775944 + G 100 -5 -5.71983 | overlap 775919 CGATCTTCTTCGATG GGCGGGCGGTTT TAA AAGCCGTCCCCG TTTTTTTGTGGTTCA TERM 930 775919 - 775943 + G 77 -8.5 -4.01563 | overlap 775918 GATCTTCTTCGATGG GCGGGCGGTTT TAA AAGCCGTCCCC GTTTTTTTGTGGTTC Paes_0726 774671 - 776068 + | beta-lactamase domain protein Paes_0727 777031 - 776117 - | tyrosine recombinase XerD Paes_0728 778386 - 777037 - | sun protein TERM 931 778637 - 778647 + H 76 -4 -5.07567 | CAACCAGCAAAGTTC TTCT GAG AGAA TTTTTTAAGCTGTCA Paes_0729 778878 - 780170 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Paes_0730 780177 - 781250 + | homoserine O-acetyltransferase Paes_0731 782530 - 781235 - | seryl-tRNA synthetase Paes_0732 783004 - 782546 - | hypothetical protein Paes_0733 783867 - 783136 - | short-chain dehydrogenase/reductase SDR Paes_0734 784059 - 784346 + | cold-shock DNA-binding domain protein Paes_0735 785139 - 784468 - | DNA repair protein RadC TERM 932 784732 - 784744 + g 100 -5.5 -5.47159 | TGATATGATTTCATG CCGGA TAA TCTGG TTTTTTGTGTTCAGG TERM 933 785091 - 785079 - G 71 -9.1 -3.5594 | overlap 785070 AACTGAGCGCCGAAA CTCCG GAG CGGAG AAAGCGTTCCCTCGG TERM 934 785385 - 785441 + r 100 -14.5 -3.29461 | opp_overlap 785373 785380 785378 785403 785419 785420, overlap 785388 GGAGAAGAGATGCGC TCTGCGTTGAGCTCAACAGGGGTTTAT TCT ACAAGCCCCTGTTGAGCTCAGGGATGG TTATGAGGCGGATTG TERM 935 785388 - 785438 + r 100 -17 -2.82623 | opp_overlap 785373 785380 785378 785403 785419 785420, overlap 785385 GAAGAGATGCGCTCT GCGTTGAGCTCAACAGGGGTTTAT TCT ACAAGCCCCTGTTGAGCTCAGGGA TGGTTATGAGGCGGA Paes_0736 787058 - 785442 - | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 936 785883 - 785868 - G 71 -3.2 -4.76312 | CAGAACAGTGAAAAA CGGC TTGAACTG GCCG AGTTGGTGACGCAGA TERM 937 786463 - 786473 + g 72 -5.4 -4.51363 | GGGACAGTGGTCGAT GATG CTA CATC TTTTACTATTTCATA TERM 938 786631 - 786613 - G 91 -7.4 -5.12617 | opp_overlap 786620 TAACCATCGAAAAAA TGCTCTGC GTC GAAGAGCA CTTCACGTCCTTCTT Paes_0737 787626 - 787066 - | 3-isopropylmalate dehydratase, small subunit Paes_0738 788968 - 787670 - | homoaconitate hydratase family protein TERM 939 788804 - 788821 + g 71 -3.4 -4.86621 | TTCAGGATCCCATAC TTTGGC GTCCGG GCCGAA TTTTTCCTTGAAAAT Paes_0739 790549 - 788975 - | 2-isopropylmalate synthase TERM 940 789574 - 789599 + g 81 -6.9 -4.59773 | gap 1, overlap 789575 CTCCTACCGACTGAG GCGTCATGACCT CAT AGGTC-TGACGG TTTTTCAGCATGCCG TERM 941 789575 - 789598 + g 72 -10.4 -3.35542 | gap 1, overlap 789574 TCCTACCGACTGAGG CGTCATGACCT CAT AGGTC-TGACG GTTTTTCAGCATGCC TERM 942 790437 - 790458 + g 74 -2.3 -5.14965 | gap 1, overlap 790439 790439 TCAACATTGAGTTTT TCGAG-TTGC CTG GCAATCTCAA TTTTTTCCTGAACGT Paes_0740 791626 - 790565 - | 3-isopropylmalate dehydrogenase TERM 943 790743 - 790771 + g 72 -5.9 -4.32177 | TCGAACATCATGGCC GCCGATGCGATCG TAG CTATCGGGTTGGC TTTGTTCTGCCCTGC TERM 944 791348 - 791368 + g 100 -8.9 -5.31275 | opp_overlap 791332 791331 GAGTTCCTTGCGGAT CCCGAGGAG GGC CGCTTCGGG TTTTTTCTCATGAGG Paes_0741 792629 - 791637 - | ketol-acid reductoisomerase Paes_0742 793161 - 792682 - | acetolactate synthase, small subunit Paes_0743 794893 - 793172 - | acetolactate synthase, large subunit, biosynthetic type Paes_0744 796605 - 794905 - | dihydroxy-acid dehydratase TERM 945 795112 - 795123 + g 76 -3.6 -4.94902 | opp_overlap 795095, overlap 795097 GCCGTTTTCTACAGC GGCT ATTG GGCC TTTTTCTGCTGCTTC TERM 946 795174 - 795160 - G 75 -11.4 -2.93207 | overlap 795149 AACATGACCTACACA GGCTCC GCG GGAGCC TCCCGAGAACCTGCC TERM 947 796558 - 796572 + g 100 -8.6 -5.69473 | CAGGCTTCTGTGCGG GGCTTT TTC AAAGCC TTTTTTTATGGTATC TERM 948 796786 - 796803 + G 76 -3.5 -5.02074 | overlap 796787 796787 AGGAGAGGATATCAG TCATTTT GCCG AAAATGG TTTTTTCGGCAATGG Paes_0745 796628 - 796888 + | hypothetical protein TERM 949 796919 - 796946 + F 79 -7.8 -4.30448 | TTAGTCATTCCGTAT TGATCTGTTGCT CTTC AGCGACACATCA TTTTGAATTGAATTT TERM 950 797263 - 797282 + G 74 -2.8 -5.01546 | CGAAAGGTTCTGCAT CTCAGC CTCGGTGT GCTGGG TTTTTGTATGCCTTT TERM 951 797943 - 797958 + G 70 -4.6 -4.44667 | opp_overlap 797942 797943, overlap 797947 ATTTCTCGATAACAG CGGTGC AACG GCAACG TTTCTTCTTGGGACG TERM 952 798317 - 798298 - g 79 -12.2 -3.10894 | opp_overlap 798293 798291, overlap 798300 ATCACGACCATGCAA GAGGTTCC TGTT GGAACCTC CGGCGGTGTTTCGAT Paes_0746 797119 - 798684 + | protein of unknown function DUF92 transmembrane TERM 953 799088 - 799100 + G 74 -3.3 -5.00884 | AAAGCAGTCGTTTGA GCCGT TAT GTGGC TTTTTTGGCGACCGT TERM 954 799106 - 799131 + G 75 -6.9 -4.38843 | gap 1 GTTATGTGGCTTTTT TGGCGACCGT TGGCAAT ACGG-CGCCA TTTATTGGTCTTTTC Paes_0747 798724 - 799386 + | protein TolQ Paes_0748 799373 - 799840 + | protein TolR Paes_0749 799827 - 800684 + | transcriptional regulator, Fis family TERM 955 801625 - 801609 - g 77 -3 -5.14563 | gap 1, opp_overlap 801610, overlap 801610 TCGGTGATGAAAAAA GGCGTCA AGAT TGAC-CC TTCATGGAGAAATGG TERM 956 802045 - 802021 - g 77 -12.1 -2.71979 | opp_overlap 802021 802016, overlap 802020 802016 CAAGACAGAATGAAG CTCCCGGCTGG TCA CCAGACGGAAG TATGATTGTCTTCAG Paes_0750 800850 - 802175 + | WD40 domain protein beta Propeller Paes_0751 802226 - 802687 + | peptidoglycan-associated lipoprotein TERM 957 802735 - 802712 - f 76 -11 -3.11192 | opp_overlap 802712 TAGATTATGAGTGAA GGGCAAGCAG TTTA CTGTTTGCCC TTTTTTTATCAGGAG TERM 958 802712 - 802735 + F 100 -13.2 -5.60993 | opp_overlap 802712 TAGATTATGAGTGAA GGGCAAGCAG TTTA CTGTTTGCCC TTTTTTTATCAGGAG TERM 959 802773 - 802759 - f 76 -2.8 -5.22006 | overlap 802761 TCAGGAGAAGAAAAA TACATG AAA CACGCA TTAAGGTATGGCATT TERM 960 803153 - 803138 - g 84 -7.6 -4.64766 | CTGATATCTCAAAAA GCTTTC TTGT GAAAGC AGGGGTGGCATCTTC Paes_0752 802762 - 803271 + | peptidoglycan-associated lipoprotein Paes_0753 803353 - 804129 + | tol-pal system protein YbgF TERM 961 804136 - 804191 + T 100 -16.5 -3.20303 | opp_overlap 804152, overlap 804136 804137 804152 CTTCAGTAAAGAGGT CTCTATCAATAAAAAACCAGGGAGT CTGTCA ACTCCCTGGTTTTTTATTGATCGCC GTTTCTCTTTGAATG TERM 962 804136 - 804192 + T 100 -16.3 -4.35646 | gap 1, opp_overlap 804152, overlap 804136 804137 804152 CTTCAGTAAAGAGGT C-TCTATCAATAAAAAACCAGGGAGT CTGTCA ACTCCCTGGTTTTTTATTGATCGCCG TTTCTCTTTGAATGT TERM 963 804137 - 804190 + T 100 -20 -2.51459 | opp_overlap 804152, overlap 804136 804136 804152 TTCAGTAAAGAGGTC TCTATCAATAAAAAACCAGGGAGT CTGTCA ACTCCCTGGTTTTTTATTGATCGC CGTTTCTCTTTGAAT TERM 964 804175 - 804152 - T 100 -13.2 -5.5112 | opp_overlap 804137 804136 804136 804152 TCTATCAATAAAAAA CCAGGGAGTC TGTC AACTCCCTGG TTTTTTATTGATCGC TERM 965 804152 - 804175 + T 100 -12.5 -5.5112 | opp_overlap 804152, overlap 804137 804136 804136 TCTATCAATAAAAAA CCAGGGAGT CTGTCA ACTCCCTGG TTTTTTATTGATCGC TERM 966 804343 - 804369 + T 71 -8.1 -3.79668 | opp_overlap 804343 CCCGGCAAAAAAAAA GCTATGCGT TCATAAAAC ACGCATAGC TTTAATGGCTTGAGT TERM 967 804369 - 804343 - T 100 -8.1 -6.06723 | opp_overlap 804343 CCCGGCAAAAAAAAA GCTATGCGT TCATAAAAC ACGCATAGC TTTAATGGCTTGAGT Paes_0754 804816 - 804433 - | photosystem P840 reaction center protein PscD TERM 968 804480 - 804490 + g 78 -5.4 -4.8083 | opp_overlap 804465 CCCCGTCTACCTCAA CACA AAG TGTG TTTTTCATCGTATTG TERM 969 804624 - 804652 + g 72 -4.5 -4.63527 | opp_overlap 804633, overlap 804633 CTATATCCGGTTGAT TGGTTAAAACCAG AAG CTGGATTTCTCCA TTTTTCAGCTGATCA TERM 970 804643 - 804633 - G 70 -6.8 -4.09685 | opp_overlap 804624 804633 GTTGATTGGTTAAAA CCAG AAG CTGG ATTTCTCCATTTTTC TERM 971 804922 - 804904 - R 100 -9.6 -6.04953 | opp_overlap 804899 804904 ATAGAAATAAAAAAA GGGATTCA TGA CGAATCCC TTTTGATTGATGAGC TERM 972 804904 - 804922 + r 88 -8.9 -4.45544 | opp_overlap 804904, overlap 804899 ATAGAAATAAAAAAA GGGATTC ATGAC GAATCCC TTTTGATTGATGAGC Paes_0755 806873 - 804951 - | chaperone protein DnaK Paes_0756 807348 - 806950 - | heat shock protein Hsp20 Paes_0757 808035 - 807646 - | transcriptional regulator, ArsR family Paes_0758 808453 - 808217 - | putative transmembrane anti-sigma factor Paes_0759 809108 - 808479 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 973 809045 - 809060 + g 91 -5.4 -5.40072 | gap 1 GTTTCTGCTGTTCCT GAGC-CG ACA CGTGCTC TTTTTTTAGCAGAGC TERM 974 809401 - 809419 + G 70 -6.6 -4.08767 | GTCTGACCGCTGCGG CCCTCCTC CAG GAGAGGGG TTTTACAACGCTGAC Paes_0760 809340 - 810851 + | FAD dependent oxidoreductase Paes_0761 812081 - 810861 - | alanine dehydrogenase/PNT domain protein Paes_0762 812875 - 812150 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 975 812449 - 812460 + g 74 -5.8 -4.55295 | TCTTATGTTCCGCAG GGCT TTGC AGCC TTTCTTTGTCCGGGG TERM 976 812625 - 812636 + g 70 -5.8 -4.15106 | CTGACAAGGGTTGAA CAGG CAAG CCTG TTTTCACCATTGATC Paes_0763 813584 - 812898 - | ferredoxin TERM 977 813495 - 813506 + g 86 -3.6 -5.45056 | opp_overlap 813491 GCCACCGCAAATATA GCCT ATAT GGGC TTTGTTTTTTTTTGC TERM 978 813839 - 813801 - g 95 -14.8 -3.2241 | gap 1, opp_overlap 813809, overlap 813809 CATCTTGCAGAAAAC CGCAAAAAGCCCCGGTG TTAATT CACCGGAGCTTTTTG-G TCTATCCTGAGCGCT TERM 979 813832 - 813809 - g 100 -11.7 -4.75063 | opp_overlap 813809, overlap 813801 AGAAAACCGCAAAAA GCCCCGGTG TTAATT CACCGGAGC TTTTTGGTCTATCCT TERM 980 813809 - 813832 + G 95 -9.5 -4.85129 | opp_overlap 813809 813801 AGAAAACCGCAAAAA GCCCCGGTG TTAATT CACCGGAGC TTTTTGGTCTATCCT Paes_0764 813610 - 813849 + | hypothetical protein TERM 981 813841 - 813863 + T 73 -4.8 -4.67038 | overlap 813858 CCGGAGCTTTTTGGT CTATCCTGAG CGC TTCAGGAAGG TTTTGCTTTTCAGCA Paes_0765 814651 - 813818 - | ferredoxin TERM 982 813867 - 813914 + g 77 -6.4 -4.65747 | gap 1, overlap 813866 813858 813876 GCTTCAGGAAGGTTT TGCTTTTCAGCAGGTTCTTTCTT TGT AAGAGAG-GCCTGCTCTATAGCA TTTTGTTCCAGGTTG Paes_0766 818010 - 814648 - | transcription-repair coupling factor Paes_0767 818098 - 819066 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Paes_0768 819284 - 819132 - | hypothetical protein Paes_0769 819299 - 820009 + | two component transcriptional regulator, winged helix family Paes_0770 819999 - 821798 + | multi-sensor signal transduction histidine kinase TERM 983 822332 - 822346 + G 74 -8.6 -3.9461 | AAACTATTATTGTCA CGATTG GGT CAATCG TTGTTATTGCAAAAC Paes_0771 821878 - 823164 + | MscS Mechanosensitive ion channel TERM 984 823182 - 823228 + T 82 -10.2 -4.09685 | overlap 823184 823185 CTGTTGCGATCCGTA TTGGCTCATGGATGAGGCCT TATGAAC AGGCCTCATCCATGAGGATG TTTTCCAGGATGCGA TERM 985 823184 - 823226 + T 100 -15 -3.64716 | overlap 823182 823185 GTTGCGATCCGTATT GGCTCATGGATGAGGCCT TATGAAC AGGCCTCATCCATGAGGA TGTTTTCCAGGATGC TERM 986 823185 - 823225 + T 100 -18.5 -2.78508 | overlap 823184 823182 TTGCGATCCGTATTG GCTCATGGATGAGGCCT TATGAAC AGGCCTCATCCATGAGG ATGTTTTCCAGGATG Paes_0772 823654 - 823250 - | ferredoxin Paes_0773 824466 - 823753 - | beta-lactamase domain protein Paes_0774 824956 - 824441 - | NUDIX hydrolase TERM 987 824571 - 824541 - GH 93 -8.3 -4.87786 | opp_overlap 824522 824540 824538 824541 TCAAGCGGATAAAAA TCCGCTTCAAACA GTTCG TGATTGATGCGGA GTGTATTGCTTGTAA Paes_0775 825203 - 825673 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Paes_0776 825677 - 826240 + | protein of unknown function DUF179 Paes_0777 826346 - 826251 - | hypothetical protein TERM 988 826916 - 826945 + H 100 -16.6 -5.75342 | opp_overlap 826913 826920 AGATCCCGAAAAGTC CAAAGACCCCTG CGAAAT CAGGGGTCTTTG TTTTTTTTCAGAAAA TERM 989 826941 - 826920 - H 91 -11.6 -3.76413 | opp_overlap 826916, overlap 826913 CCCGAAAAGTCCAAA GACCCCTG CGAAAT CAGGGGTC TTTGTTTTTTTTCAG Paes_0778 827004 - 827111 + | hypothetical protein Paes_0780 827752 - 827354 - | death-on-curing family protein TERM 990 827678 - 827656 - G 85 -8.4 -4.46212 | opp_overlap 827658, overlap 827658 827671 GGGCTGACGACAAAA GACCGGCATC ACG AATGCCGGTA CTTCCGCCATGCTCG TERM 991 827676 - 827658 - G 84 -11 -3.84183 | opp_overlap 827658, overlap 827656 827671 GCTGACGACAAAAGA CCGGCATC ACG AATGCCGG TACTTCCGCCATGCT Paes_0781 827970 - 827749 - | transcriptional regulator/antitoxin, MazE TERM 992 827851 - 827861 + g 72 -8.2 -3.76952 | GGGCGTTACGGCATA CCCC GAA GGGG TTTCCGTTAGATACA TERM 993 828063 - 828078 + H 70 -6.2 -4.25437 | opp_overlap 828062 TGGATGCGGATAAGT GTATAC ATTG GTATAC TTTATGTGTTGATTT TERM 994 828149 - 828182 + H 100 -11.8 -4.92385 | opp_overlap 828151, overlap 828151 TCTCCAGAAATAGTA AACTCCCTTGCAGT ATAACA GCTGCAAGGGAGTG TTTTGTTTCAGTATG TERM 995 828151 - 828180 + H 100 -14.4 -4.07285 | opp_overlap 828151, overlap 828149 TCCAGAAATAGTAAA CTCCCTTGCAGT ATAACA GCTGCAAGGGAG TGTTTTGTTTCAGTA TERM 996 828180 - 828151 - H 100 -13.7 -4.04579 | opp_overlap 828151 828149 TCCAGAAATAGTAAA CTCCCTTGCAG TATAACAG CTGCAAGGGAG TGTTTTGTTTCAGTA TERM 997 828291 - 828303 + H 77 -4.8 -4.93288 | opp_overlap 828291 TTTTTAGGCAAGTAA CGCT TTAAT AGCG TTTTCTTTGACTGTT Paes_0782 828668 - 843697 + | von Willebrand factor type A TERM 998 843795 - 843831 + F 100 -10.2 -5.9003 | GTGATTTTTCGCAAT CCACCCTGGAAATGAT GGACA GTTTTTTCCGGGGTGG TTTTTTTATTCCTTT TERM 999 845911 - 845886 - g 72 -7.5 -3.87584 | overlap 845887 AACGATAACGAAGAA CTGCCGCTGGA TCTG TCGAGCGGCAT CATCGCGACGGACAA TERM 1000 845910 - 845887 - g 71 -11 -2.91466 | overlap 845886 ACGATAACGAAGAAC TGCCGCTGGA TCTG TCGAGCGGCA TCATCGCGACGGACA TERM 1001 846367 - 846342 - g 72 -7.5 -3.87584 | overlap 846343 AACGATAACGAAGAA CTGCCGCTGGA TCTG TCGAGCGGCAT CATCGCGACGGACAA TERM 1002 846366 - 846343 - g 71 -11 -2.91466 | overlap 846342 ACGATAACGAAGAAC TGCCGCTGGA TCTG TCGAGCGGCA TCATCGCGACGGACA TERM 1003 851640 - 851624 - g 91 -9.3 -4.70169 | overlap 851633 851634 CGATAGCGAAGAAAA CGGCGAC AAC GGCGCCG ATACGCCCGGGGCGG TERM 1004 852858 - 852870 + G 78 -9.1 -3.88291 | AGCGGCATACCCGAG GGAGC GAA GCTCC TTTATGCGGATGGTA TERM 1005 853055 - 853031 - g 75 -11.5 -2.95751 | overlap 853028 853025 TGATGAACATAACGA TTTCACCGTCA CCA TGACGGTGACA GAATACGAGGTTGAC TERM 1006 854107 - 854092 - g 77 -10.4 -3.62859 | overlap 854084 ATCAGAACGGCGAAA CCGACG ATAT CGTCGG GCAGCAGGAAATAGC TERM 1007 855875 - 855860 - g 73 -9 -3.61609 | overlap 855854 CTATGTAAACCAGAA CACGGT GATT ACCGTG CCGGTGACCGTGACC TERM 1008 856772 - 856760 - g 72 -7.7 -3.98627 | opp_overlap 856742 856759 856760 TGATGAAGACAACAA CGTGA TCT TCACG GTTTCCTTCAGCAAC Paes_0783 844035 - 858281 + | outer membrane adhesin like proteiin Paes_0784 858397 - 859872 + | type I secretion outer membrane protein, TolC family TERM 1009 860006 - 860051 + G 90 -7.6 -5.0133 | gap 2, opp_overlap 860033, overlap 860008 CTTCAGCGTGAAGCT TTGCTGGCCGG-T-CTGCCTCT TGAT AAAGGCAGGATCCGGCCAGCTC TTTTTTCAAGAGCTG TERM 1010 860008 - 860049 + G 100 -14.6 -4.13561 | gap 2, opp_overlap 860033, overlap 860006 TCAGCGTGAAGCTTT GCTGGCCGG-T-CTGCCTCT TGAT AAAGGCAGGATCCGGCCAGC TCTTTTTTCAAGAGC TERM 1011 860101 - 860129 + G 93 -8.8 -4.93316 | CAGTCGCATTGTCAG GCGCGGGATTGA ACAAC TCAACCCGGCGC TTTTTCCTGTTATTC TERM 1012 861584 - 861598 + G 77 -2.8 -5.12617 | overlap 861568 CTCGGGCATGTGCCT CAGGAT GTT ATGCTG TTTTTTGGCTCATTG Paes_0785 859889 - 862051 + | type I secretion system ATPase Paes_0786 862048 - 863466 + | type I secretion membrane fusion protein, HlyD family Paes_0787 863686 - 864072 + | NUDIX hydrolase Paes_0788 864327 - 865052 + | protein of unknown function DUF45 Paes_0789 865424 - 865152 - | hypothetical protein Paes_0790 865968 - 865525 - | hypothetical protein TERM 1013 865858 - 865869 + g 70 -3.6 -4.65895 | TATGATGAGCGATGC GGCG TTGA TGCC TTTTTCGGTCGCGAA Paes_0791 867396 - 866032 - | outer membrane efflux protein TERM 1014 866531 - 866544 + g 100 -8.1 -5.63857 | GTGAGGCCGATCGTT GGAGC CCAG GCTCC TTTTTTTGCATTTTT TERM 1015 867268 - 867288 + g 77 -8.9 -4.0274 | overlap 867269 867277 GATGTCGGGGTTATT ATCCAGCGC GAG GCGCTGGGC TTCTTTGATCGTCAG TERM 1016 867269 - 867287 + g 79 -12.4 -3.01162 | overlap 867268 867277 ATGTCGGGGTTATTA TCCAGCGC GAG GCGCTGGG CTTCTTTGATCGTCA Paes_0792 870444 - 867403 - | acriflavin resistance protein TERM 1017 868284 - 868302 + g 70 -5.8 -4.19704 | overlap 868296 ACGTCGCAAGGTCGA GCCTCGTG ATG CCCGCGGC TTTTGCCTGCGCTTC Paes_0793 871613 - 870441 - | efflux transporter, RND family, MFP subunit Paes_0794 872293 - 871628 - | transcriptional regulator, TetR family TERM 1018 872110 - 872077 - G 74 -10.5 -3.21747 | gap 1, opp_overlap 872068, overlap 872058 CGATCGCATCAGCAA CGCTGAAGTTATTTCC CCT GGCAATAACTTCA-CG GATGACCGCTTCAAA TERM 1019 872545 - 872564 + G 74 -6.4 -4.47611 | opp_overlap 872548, overlap 872548 TTTTATGGATATGAT CAAGGGTA ACAT TACCCTGG TGTTTTTTTATCATG TERM 1020 872966 - 872982 + G 100 -4.3 -5.61596 | overlap 872963 ATGTTTTTCCTTCCT GTCAGTC TCT GTCTGGC TTTTTTTGTGAGGGT Paes_0795 872516 - 873871 + | multi antimicrobial extrusion protein MatE Paes_0796 875276 - 873849 - | phytoene desaturase Paes_0797 876084 - 875278 - | MscS Mechanosensitive ion channel TERM 1021 875932 - 875943 + g 84 -3.6 -5.24129 | CTTCACCAGCATTTC GTCG ATAT CGGC TTTTTTGTGAAGCAG Paes_0798 876494 - 876177 - | hypothetical protein Paes_0799 876813 - 877073 + | hypothetical protein TERM 1022 877125 - 877170 + T 100 -21.5 -4.59342 | opp_overlap 877130, overlap 877130 CCTTTTGAAGGCGCA AAAAACACACAAGGCCGTTAT CGCT GTAACGGCCTTGTGTGTTTTG TTTGTTTGTCATGCC TERM 1023 877130 - 877165 + T 100 -21.4 -5.22481 | opp_overlap 877130, overlap 877125 TGAAGGCGCAAAAAA CACACAAGGCCGTTAT CGCT GTAACGGCCTTGTGTG TTTTGTTTGTTTGTC TERM 1024 877165 - 877130 - T 100 -20.7 -5.055 | opp_overlap 877125 877130 TGAAGGCGCAAAAAA CACACAAGGCCGTTA TCGCTG TAACGGCCTTGTGTG TTTTGTTTGTTTGTC Paes_0800 878039 - 877200 - | GCN5-related N-acetyltransferase Paes_0801 879477 - 878014 - | SSS sodium solute transporter superfamily Paes_0802 880797 - 879484 - | lysine 2,3-aminomutase YodO family protein Paes_0803 881287 - 880754 - | transcriptional regulator, MarR family TERM 1025 882114 - 882127 + G 70 -3.8 -4.67982 | overlap 882113 GGAGGATTGGAGATT CTCG ATATCG CGAG TTTTATTCACTGGAA Paes_0804 881436 - 882221 + | hypothetical protein Paes_0805 882275 - 882427 + | hypothetical protein Paes_0806 883056 - 882388 - | Phosphoribosylanthranilate isomerase TERM 1026 883160 - 883170 + r 100 -5.4 -5.75342 | TCGGGTACTCAGCGT CAAG ATA CTTG TTTTTTTTGGAAGCG TERM 1027 883234 - 883209 - R 91 -6.2 -5.37593 | opp_overlap 883209 GGGGAAATGAAAAAA GCGCTTCA GGACTTATGG TGAAGCGC TTTTTTTCTGCTGGG TERM 1028 883209 - 883234 + r 100 -6.2 -5.67063 | opp_overlap 883209 GGGGAAATGAAAAAA GCGCTTCA GGACTTATGG TGAAGCGC TTTTTTTCTGCTGGG TERM 1029 883393 - 883381 - R 83 -6.3 -5.13016 | AATCAAAATCAAAAA CCATT TTC AATGG TCCAGCACGGATGCA TERM 1030 883584 - 883618 + r 100 -16.6 -2.87463 | gap 1, opp_overlap 883584 883586, overlap 883586 883590 TCAACCTGCCGTAAA C-ACCAACAGCCCGG ATGGTG CCGGGCTGTTGGTCG TATGTGGAAAACCTT TERM 1031 883617 - 883584 - R 100 -16.8 -3.54459 | opp_overlap 883584 883586 883590, overlap 883586 TCAACCTGCCGTAAA CACCAACAGCCCGG ATGGTG CCGGGCTGTTGGTC GTATGTGGAAAACCT TERM 1032 883615 - 883586 - R 100 -19.4 -3.34894 | opp_overlap 883586 883584 883590, overlap 883584 AACCTGCCGTAAACA CCAACAGCCCGG ATGGTG CCGGGCTGTTGG TCGTATGTGGAAAAC TERM 1033 883586 - 883615 + r 100 -19.4 -2.69151 | opp_overlap 883584 883586, overlap 883584 883590 AACCTGCCGTAAACA CCAACAGCCCGG ATGGTG CCGGGCTGTTGG TCGTATGTGGAAAAC TERM 1034 883590 - 883611 + r 91 -13 -3.26545 | opp_overlap 883586 883584, overlap 883586 883584 TGCCGTAAACACCAA CAGCCCGG ATGGTG CCGGGCTG TTGGTCGTATGTGGA Paes_0807 885056 - 883638 - | adenosylhomocysteinase TERM 1035 884044 - 884069 + g 72 -7.6 -3.86202 | AAATGGCCGATATTG CAGATGATGG CTTCGT CCCTCATCTG TTTCATGTGCTCAAG TERM 1036 884793 - 884750 - G 75 -5.2 -4.65895 | gap 1 CTTTCCAGGCAAAAA CCGGAACCCCTGCTGCTGCAA TAG CTGCAGCGGCATG-ATCCTGG GTGGAGAAAATATTG Paes_0808 886307 - 885090 - | Methionine adenosyltransferase TERM 1037 885633 - 885653 + g 82 -3.3 -5.243 | overlap 885601 885599 AGGAATAACCTTGCT GATGACATT GTC AATGATATC TTTTTTGATGATTTC TERM 1038 885819 - 885836 + g 78 -5.5 -4.82901 | CATGATCTTGCCTTC CTTGCGG ATTG CGGCAAG TTTTTCTACCAGAGC Paes_0809 887567 - 886587 - | Nucleotidyl transferase TERM 1039 886904 - 886926 + g 74 -6.2 -4.56775 | TTGCAAGCAGTGTTT CTGGTTTGCC GCA GTCATACCAG TTTTTGACAGGAAAT TERM 1040 886975 - 887004 + g 77 -2.7 -5.12987 | overlap 886976 GACTCTATCATATGC TGGAGGGCGTCGG TCAG CTGATACTCTCCC TTTGTTTTTATTTCA Paes_0810 887874 - 888284 + | NUDIX hydrolase Paes_0811 888363 - 888812 + | transcriptional regulator, MarR family TERM 1041 889805 - 889834 + G 72 -10.7 -3.00923 | overlap 889781 ATGCCGTAGCCATTC CCCGATCGCTTCT GCTG GGAGGCGATGGGG TCTATGCTCTTGAGG Paes_0812 888880 - 890028 + | efflux transporter, RND family, MFP subunit TERM 1042 891395 - 891413 + GF 91 -5.3 -5.38054 | CGCGGTTCTTACCAC GATCGTG TTTTT CATGATC TTTTTGTTTCTCGAC TERM 1043 891722 - 891734 + GF 79 -4.1 -5.11937 | overlap 891723 GATGAAGGGTGGTAT TGTCA AGA TGACG TTTTTTCCGATTATT TERM 1044 892548 - 892533 - gf 70 -5.4 -4.30416 | gap 1, opp_overlap 892533 892535, overlap 892527 ATCACGAACTCAAAA GCTTCCG TTC CGGA-GC TTCTTGAACAGATAG Paes_0813 890085 - 893246 + | acriflavin resistance protein TERM 1045 893808 - 893782 - gf 74 -10.1 -3.14931 | gap 1 TCGATCTCTGATGAA CG-GCTCAGGCG TGCG CGCCTGCGCTCG GAATATGGTCAGGCA TERM 1046 893942 - 893971 + GF 81 -12.3 -2.53346 | overlap 893941 893938 893933 TTCTGCTTCATCGTC CGGTTTCAACC CTTTGTTC GGTTGAAACCG ATGTTCAATTTGTCC TERM 1047 894518 - 894532 + GF 70 -4.2 -4.62336 | CTATTGCAAGCGCAC GCTATG AAG CAAAGC TTTTTGAAATCCGGT Paes_0814 893221 - 894588 + | outer membrane efflux protein TERM 1048 895257 - 895233 - f 100 -12.9 -3.53224 | opp_overlap 895233, overlap 895220 TAGCCTTTCTGTAAA GCTCTGTTCGA ATT TCGATCAGAGC TTTTTTTTTATGAAT TERM 1049 895233 - 895257 + F 100 -12.9 -6.24157 | opp_overlap 895220 895233 TAGCCTTTCTGTAAA GCTCTGTTCGA ATT TCGATCAGAGC TTTTTTTTTATGAAT TERM 1050 896972 - 896984 + G 90 -6.9 -5.09426 | TATACGACATGGGAA CCGCG ATC TGCGG TTTTTTGAAATTGCC TERM 1051 896997 - 897028 + G 70 -10.8 -2.70932 | gap 1, opp_overlap 896996 CGGTTTTTTGAAATT GC-CCGGGCGTTCCG TTC CGGAGCGCTCGACGC TCCTTCGACAGACCC Paes_0815 895290 - 897701 + | phenylalanyl-tRNA synthetase, beta subunit Paes_0816 897719 - 898021 + | hypothetical protein Paes_0817 898031 - 898294 + | hypothetical protein Paes_0818 898596 - 900170 + | RNA binding metal dependent phosphohydrolase TERM 1052 900216 - 900244 + T 100 -17.6 -5.08824 | opp_overlap 900216 900222, overlap 900222 AATATTCAGGTAAAA GAAAAACCGGGC AGGAA GCCCGGTTTTTC TTTTTTCAGTCGAGC TERM 1053 900244 - 900216 - T 100 -17.6 -4.20932 | opp_overlap 900216 900222, overlap 900222 AATATTCAGGTAAAA GAAAAACCGGGC AGGAA GCCCGGTTTTTC TTTTTTCAGTCGAGC TERM 1054 900238 - 900222 - T 100 -10.8 -5.48213 | opp_overlap 900216 900222, overlap 900216 CAGGTAAAAGAAAAA CCGGGC AGGAA GCCCGG TTTTTCTTTTTTCAG TERM 1055 900222 - 900238 + T 100 -10.8 -5.75538 | opp_overlap 900222 900216, overlap 900216 CAGGTAAAAGAAAAA CCGGGC AGGAA GCCCGG TTTTTCTTTTTTCAG TERM 1056 900511 - 900491 - T 81 -12.5 -2.53911 | CGAAGGTGCAATGTA GGGGCGAGG TGC CCTCGCCCG TGGCGACCTGACGAG Paes_0819 900696 - 900565 - | hypothetical protein Paes_0820 901313 - 900711 - | Imidazoleglycerol-phosphate dehydratase Paes_0821 901564 - 901322 - | hypothetical protein Paes_0822 901654 - 902010 + | preprotein translocase, SecG subunit TERM 1057 902131 - 902106 - f 80 -6.2 -4.84146 | opp_overlap 902106 ACCATACAAAAGAAA GACTTACAGG TTCAGG CTTGTAAGTC TTTTTTGTTTTGTCA TERM 1058 902106 - 902131 + F 100 -9.1 -5.86976 | opp_overlap 902106 ACCATACAAAAGAAA GACTTACAGGT TCAG GCTTGTAAGTC TTTTTTGTTTTGTCA TERM 1059 903782 - 903772 - g 70 -6.8 -4.08485 | opp_overlap 903771 GGGATTCAAAGCAAA GCGA CGG TCGC AATTTTCAGGCTGCT TERM 1060 905790 - 905762 - g 74 -11 -3.17714 | opp_overlap 905752, overlap 905752 CGAAACGCGGATGAA TCCCCACCTGCG TTATG CCCAGGTGAGGA TGGGGCATAATAATA Paes_0823 902718 - 906488 + | hypothetical protein Paes_0824 906862 - 908196 + | permease YjgP/YjgQ family protein Paes_0825 908638 - 908282 - | thioesterase superfamily protein TERM 1061 908682 - 908736 + r 90 -10.6 -4.43221 | opp_overlap 908685, overlap 908683 TGCAGGATGGTGTAA CCAGGATGACCTCTTCCCGGTCGAGT CTG ACTTGTCCGGGAAGACGAGAGCCTGA TTTTCTGACATATTT TERM 1062 908683 - 908735 + r 95 -14.1 -3.24848 | opp_overlap 908685, overlap 908682 GCAGGATGGTGTAAC CAGGATGACCTCTTCCCGGTCGAGT CTG ACTTGTCCGGGAAGACGAGAGCCTG ATTTTCTGACATATT Paes_0826 910278 - 908662 - | protein of unknown function DUF814 TERM 1063 909177 - 909189 + g 70 -6.9 -4.02905 | CTTCTGTTTTTCGAT GCTGC ATT GCGGC TATTTTTCCTCTCGT Paes_0827 910369 - 910893 + | CMP/dCMP deaminase zinc-binding TERM 1064 911951 - 911977 + G 77 -7.3 -4.58663 | gap 1 TCTGTCGATGATGCT CCGGTCATGAGG TTTT CCTCATC-CCGG TTTTTAGGCAATGAT Paes_0828 910904 - 912025 + | riboflavin biosynthesis protein RibD TERM 1065 912116 - 912138 + G 71 -2.7 -4.7373 | gap 1, overlap 912118 912120 TAAATTGTTCCTGCG GCTTTCAGTC GGAG GACTGAT-GC TTTTTCATGGAATAC Paes_0829 912060 - 912482 + | DoxX family protein TERM 1066 912778 - 912795 + G 81 -6.9 -4.63527 | opp_overlap 912778, overlap 912780 GGTCTCTTCCTCAAA CAGGAGC TGCG GCTCCCG TTTTTACGCTGGTGA TERM 1067 912795 - 912778 - g 71 -9.1 -3.53012 | opp_overlap 912778 912780 GGTCTCTTCCTCAAA CAGGAGC TGCG GCTCCCG TTTTTACGCTGGTGA Paes_0830 912720 - 913220 + | Redoxin domain protein TERM 1068 913246 - 913261 + F 100 -10.4 -5.80364 | opp_overlap 913246 GACGAGGTGGGAAAA CCGGTG ATTG CACCGG TTTTTTTATTGGGCT TERM 1069 913261 - 913246 - f 82 -10.4 -4.10161 | opp_overlap 913246 GACGAGGTGGGAAAA CCGGTG ATTG CACCGG TTTTTTTATTGGGCT Paes_0831 913352 - 914008 + | riboflavin synthase, alpha subunit TERM 1070 914415 - 914455 + G 70 -6.1 -4.25104 | opp_overlap 914410 914409, overlap 914416 CTTCAACAAGGCGCA GCAGGATTCCCTGCTGCAT GCC ATCGAGCAGGGGATCGTGG TTTTGATCGGGGCAA TERM 1071 914832 - 914857 + G 93 -9.7 -4.4715 | gap 1 ATTCATCAAGTCGCT GCGTGGC-TCGG ATC CCGATGCTGCGC TTTTCTGGCTTGCAA Paes_0832 914011 - 915375 + | AAA ATPase central domain protein TERM 1072 915499 - 915510 + G 75 -7.2 -4.41047 | TTTCAGCCTGTTGTT GCCC GGCC GGGC TTTTACTTCAGGCGT TERM 1073 916241 - 916260 + G 89 -13.6 -3.23853 | overlap 916239 CAGCCGGGTGATATT GCTTCGGC CTAT GCCGAAGC TCTTGATTCGAGGCC Paes_0833 915359 - 916849 + | outer membrane efflux protein Paes_0834 917986 - 917039 - | UspA domain protein TERM 1074 917805 - 917821 + g 85 -6.6 -4.85782 | opp_overlap 917814, overlap 917814 917818 GATTCAATGTCATGG TTCAGG TAATT CCTGAA TTTCTTTTTCAGGGA Paes_0835 919692 - 918007 - | sodium/hydrogen exchanger TERM 1075 918263 - 918235 - G 84 -14 -2.63079 | gap 1, opp_overlap 918232, overlap 918232 918231 GGCTGACACAACCCA TTGCACACCCTGC AATG GCAGGGTG-GCAA GAAATTCCTGATCGC Paes_0836 920826 - 919894 - | Methyltransferase type 12 Paes_0837 921365 - 920844 - | histidine triad (HIT) protein TERM 1076 921359 - 921377 + g 78 -5.2 -4.74917 | overlap 921360 921374 AGGGAGAGTACATTT TCTGCATG CGT CAAGCAGG TTTTCTGTCTTTGAT TERM 1077 921898 - 921883 - g 90 -4.7 -5.40474 | opp_overlap 921869 ACGGTCTGAAAAAAA TCGGA CGGGTT TCCGA TTACAATATTACGTT Paes_0838 921690 - 922283 + | hypothetical protein TERM 1078 922344 - 922334 - g 75 -5.4 -4.59773 | GGCGAGGTTGAAAAA CTGA CCC TCAG AAATCTCTGGCCGAG TERM 1079 922781 - 922801 + G 70 -9.7 -3.22135 | opp_overlap 922771, overlap 922779 AACAAGCTCTGGCAG GATCCTGAG CTT CACAGGATC TATATTGATTATCTG TERM 1080 922985 - 922973 - g 100 -4.8 -5.626 | opp_overlap 922981 GAGGCGATAAAAAAA CGGA TTACT TCCG ATCCTCGAAATGTGT Paes_0839 922280 - 923338 + | ferrochelatase TERM 1081 923575 - 923588 + G 71 -2.3 -5.0133 | overlap 923559 923576 923581 923586 CTTCTGAGGGTTGTG ACCCT CGAC AGGGC TTTTTTGCCCGCGTA Paes_0840 923335 - 923934 + | Tetratricopeptide TPR_2 repeat protein TERM 1082 923995 - 924007 + G 82 -3.3 -5.19328 | AGCGTTATGAAGCGC CTCCT CAC AGGTG TTTTTGTTGTCGCAT Paes_0841 923950 - 924204 + | hypothetical protein Paes_0842 924408 - 924824 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Paes_0843 924863 - 925435 + | NADH-quinone oxidoreductase, B subunit Paes_0844 925468 - 925995 + | NADH (or F420H2) dehydrogenase, subunit C TERM 1083 926280 - 926292 + G 76 -7.7 -4.1552 | AGTGGTCGATTATCC TGGCA TCG TGCCA TTTGTTGACAGGATG Paes_0845 926032 - 927234 + | NADH dehydrogenase (quinone) TERM 1084 928181 - 928193 + G 76 -4.1 -4.96501 | ATTCTGGATTATCAT GAAGG GCT TCTTC TTTATTTTTATCCAG Paes_0846 927231 - 928337 + | NADH dehydrogenase (quinone) TERM 1085 928952 - 928937 - g 83 -6 -4.91109 | overlap 928938 TGCTGACGAGAAAAA GGCCGC TGAT GCGGCA AAAGCGGCGGCGAAA TERM 1086 928951 - 928938 - g 71 -9.5 -3.54183 | overlap 928937 GCTGACGAGAAAAAG GCCGC TGAT GCGGC AAAAGCGGCGGCGAA Paes_0847 928383 - 929003 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Paes_0848 929034 - 929555 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Paes_0849 929568 - 929885 + | NADH-ubiquinone oxidoreductase chain 4L TERM 1087 930413 - 930428 + G 82 -3.2 -5.30616 | TGGTCGGTCTTTCTT CCTATC TCCT GATCGG TTTTTATTTCCATAA TERM 1088 931222 - 931232 + G 75 -4.6 -4.77775 | ATTTATTATTTGATT CCGG CGC TCGG TTTCTTTTCTGCCAT Paes_0850 929932 - 932184 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 1089 932653 - 932664 + G 74 -5.8 -4.48317 | ATGATGGGATGTTTT GTCG CCCT CGAC TTCTTTCTTTTCTAC Paes_0851 932227 - 933864 + | proton-translocating NADH-quinone oxidoreductase, chain M Paes_0852 933969 - 935504 + | proton-translocating NADH-quinone oxidoreductase, chain N TERM 1090 935534 - 935561 + F 100 -12 -5.63504 | AGGTATGTTGTTTAA CCCGCCTGGCAA TTGA TTGTGAGGCGGG TTTTTTTGTGGAGTT Paes_0853 935698 - 936792 + | hydrogenase (NiFe) small subunit HydA TERM 1091 937022 - 937034 + G 73 -9.1 -3.62859 | TTGCTTCTGTGCGCT GCGTC GAA GACGC TTTGGGGATTGTGAT Paes_0854 936796 - 938514 + | nickel-dependent hydrogenase large subunit Paes_0855 938527 - 939216 + | Ni/Fe-hydrogenase, b-type cytochrome subunit Paes_0856 939197 - 939466 + | hypothetical protein Paes_0857 939764 - 940237 + | hydrogenase maturation protease Paes_0858 941442 - 940234 - | protein of unknown function UPF0118 Paes_0859 942144 - 941464 - | GTP cyclohydrolase I Paes_0860 942553 - 942104 - | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein Paes_0861 942818 - 943132 + | Thioredoxin domain Paes_0862 943619 - 943143 - | hypothetical protein TERM 1092 944445 - 944429 - g 79 -3.6 -5.07486 | CAGCTTCAATAAAAA GTGCGG GTTTT CCGTAC GCTGCGTCAAGGATA Paes_0863 943731 - 944468 + | major paralogous domain protein TERM 1093 944505 - 944532 + F 100 -7.7 -5.89921 | TTTTTTCTCTTTTGA GCCTCATCGGG ATGCTG CTGGATGAGGC TTTTTTTGTTGTAAT TERM 1094 944707 - 944695 - f 74 -10.5 -3.14211 | opp_overlap 944694 944693 AGCTGCGGTCATGAA CCGGC TAA GCCGG AATTGTTCACATCAG Paes_0864 944833 - 945090 + | hypothetical protein Paes_0865 945422 - 946063 + | hypothetical protein Paes_0867 946663 - 947058 + | Glyoxalase/bleomycin resistance protein/dioxygenase Paes_0868 947109 - 947792 + | HAD-superfamily hydrolase, subfamily IA, variant 1 Paes_0869 947886 - 948101 + | hypothetical protein TERM 1095 948822 - 948834 + G 71 -3.3 -4.80396 | overlap 948823 AGCAGGAGCAATTGT GCCTG GAT CAGGG TTTTTGGATATTTTG Paes_0870 948258 - 948917 + | major paralogous domain protein TERM 1096 948971 - 948958 - f 93 -9.5 -5.00616 | opp_overlap 948958 TTGTCTTTTAAAAAA GCGCC ATCA GGCGC TTTTTTAAATGCTAA TERM 1097 948958 - 948971 + F 93 -9.5 -5.1101 | opp_overlap 948958 TTGTCTTTTAAAAAA GCGCC ATCA GGCGC TTTTTTAAATGCTAA TERM 1098 949360 - 949372 + G 100 -4.7 -5.52384 | opp_overlap 949359, overlap 949361 AGGGGAGTATTAACC CCGGC AGT GCCGA TTTTTTTGATCGGGC TERM 1099 949361 - 949371 + G 74 -8.2 -3.90707 | opp_overlap 949359, overlap 949360 GGGGAGTATTAACCC CGGC AGT GCCG ATTTTTTTGATCGGG TERM 1100 950241 - 950262 + G 93 -2.2 -5.69262 | opp_overlap 950236, overlap 950236 950241 CTCTTCAACACGCCA GAGACCGG TGTTTC CTTGTCTC TTTTTGTTTTTCTGC Paes_0871 949218 - 950552 + | protein of unknown function DUF107 Paes_0872 950552 - 951313 + | band 7 protein Paes_0873 951310 - 951762 + | UspA domain protein Paes_0874 952777 - 951752 - | LAO/AO transport system ATPase Paes_0875 956025 - 952780 - | methylmalonyl-CoA mutase, large subunit TERM 1101 952933 - 952944 + g 70 -3.6 -4.62904 | opp_overlap 952923 GATAACCACAATATC GCGG CGTC CTGC TTTTTCAAGGTCTTT Paes_0876 957821 - 956046 - | acetyl-CoA carboxylase alpha subunit-like protein TERM 1102 956791 - 956803 + g 75 -5.5 -4.67353 | GCAGAGTAGAGAACG GGGTC GTA GATCC TTTTTCCATCGCTGC Paes_0877 958242 - 957838 - | methylmalonyl-CoA epimerase TERM 1103 957873 - 957899 + g 100 -3.8 -5.8187 | overlap 957889 CTATAAGAACCCTGC TTGTGTCTTTCG GGT TGAAAAATACAA TTTTTTTCTTCCCTG TERM 1104 958273 - 958322 + r 100 -19.4 -3.35813 | opp_overlap 958276 958281, overlap 958274 TGTTGCGTTGCTGAA CGATTGAACCTGCCCGGACAGA TTGCAT TCTGTCCGGGCAGGCTCAAACA TTACTTCGGGTAGCC TERM 1105 958274 - 958321 + r 100 -22.9 -2.61274 | opp_overlap 958276 958281, overlap 958273 GTTGCGTTGCTGAAC GATTGAACCTGCCCGGACAGA TTGCAT TCTGTCCGGGCAGGCTCAAAC ATTACTTCGGGTAGC TERM 1106 958319 - 958276 - R 100 -26.3 -2.70932 | opp_overlap 958274 958273, overlap 958281 TGCGTTGCTGAACGA TTGAACCTGCCCGGACAGA TTGCAT TCTGTCCGGGCAGGCTCAA ACATTACTTCGGGTA TERM 1107 958314 - 958281 - R 100 -22.6 -3.13164 | opp_overlap 958274 958273, overlap 958276 TGCTGAACGATTGAA CCTGCCCGGACAGA TTGCAT TCTGTCCGGGCAGG CTCAAACATTACTTC Paes_0878 960218 - 958323 - | AMP-dependent synthetase and ligase TERM 1108 958774 - 958786 + g 76 -9.1 -3.82665 | opp_overlap 958773 TCTTCGTCAATGTAG CCAGC GTC GCTGG TTTGATAATATCCTG Paes_0880 961943 - 961158 - | dimethyladenosine transferase TERM 1109 962282 - 962261 - g 81 -13.1 -2.72344 | opp_overlap 962259 962258 962279 CCGGACTGGCAACGA CCGGCAAAA AGCC TTTTGCCGG AACATTTGCGGTGTT Paes_0881 962014 - 962997 + | Transketolase central region TERM 1110 962982 - 963005 + F 84 -9.6 -4.23104 | overlap 962969 GATCTATCTGGCATT GCGCAGGA AGAATTAA TCCTGCGC TTTGTTACGATTTCA TERM 1111 963112 - 963100 - g 74 -3.4 -5.00884 | AGGCCGGCGAAAAAA TGCA GGACG TGCA GAAGCAGCTTGAGAA Paes_0882 963021 - 963377 + | hypothetical protein Paes_0883 963386 - 964000 + | recombination protein RecR TERM 1112 965299 - 965309 + G 70 -5.4 -4.4078 | opp_overlap 965290 965296 GACACAGAAAACTCC GGTT TCG AACC TTTTCCTTGCCGGCG Paes_0884 964040 - 965422 + | Carotene 7,8-desaturase TERM 1113 965792 - 965738 - f 100 -16.1 -4.09656 | gap 1, opp_overlap 965744 965749 965756, overlap 965720 965739 965749 CTTAAAACATAACAA GGCAA-AAAAAACACAAAACCCTCGT GAAA ACGGGGGTTTTGTGTTTTCTGTTGCA CCGTGAAGTATCACA TERM 1114 965791 - 965739 - f 100 -19.6 -3.04709 | gap 1, opp_overlap 965744 965749 965756, overlap 965720 965738 965749 TTAAAACATAACAAG GCAA-AAAAAACACAAAACCCTCGT GAAA ACGGGGGTTTTGTGTTTTCTGTTGC ACCGTGAAGTATCAC TERM 1115 965744 - 965785 + F 100 -18.3 -3.03124 | opp_overlap 965739 965738 965749, overlap 965749 965756 ACATAACAAGGCAAA AAAAACACAAAACCCTCGT GAAA ACGGGGGTTTTGTGTTTTC TGTTGCACCGTGAAG TERM 1116 965780 - 965749 - f 100 -16 -5.87688 | opp_overlap 965744 965749 965756, overlap 965739 965738 ACAAGGCAAAAAAAA CACAAAACCCTCGT GAAA ACGGGGGTTTTGTG TTTTCTGTTGCACCG TERM 1117 965749 - 965780 + F 100 -18.2 -4.66537 | opp_overlap 965749 965739 965738, overlap 965744 965756 ACAAGGCAAAAAAAA CACAAAACCCTCGT GAAA ACGGGGGTTTTGTG TTTTCTGTTGCACCG TERM 1118 965756 - 965773 + F 93 -9.1 -4.95843 | opp_overlap 965749 965739 965738, overlap 965749 965744 AAAAAAAACACAAAA CCCTCGT GAAA ACGGGGG TTTTGTGTTTTCTGT TERM 1119 966453 - 966440 - f 75 -9.5 -3.54424 | GGGGATCGTGGCAAA CCCGG CTGC CCGGG TTGAGCAGGGTGCTG TERM 1120 967312 - 967275 - f 79 -9.1 -3.88946 | gap 1, opp_overlap 967294 967297, overlap 967279 967280 TAGTGCAGATAATAA GTAATGTTGCAGGCGCGC TGC GCACGCCTGCAACGGC-C GAGTTGAGTAAACTC TERM 1121 967309 - 967279 - f 100 -17.6 -3.60395 | opp_overlap 967294 967297, overlap 967275 967280 GCAGATAATAAGTAA TGTTGCAGGCGCGC TGC GCACGCCTGCAACG GCCGAGTTGAGTAAA TERM 1122 967308 - 967280 - f 100 -21.1 -2.75514 | opp_overlap 967294 967297, overlap 967279 967275 CAGATAATAAGTAAT GTTGCAGGCGCGC TGC GCACGCCTGCAAC GGCCGAGTTGAGTAA TERM 1123 967382 - 967325 - f 100 -18.6 -3.74693 | opp_overlap 967294 967331 967334, overlap 967331 967334 GCCGAGTTGAGTAAA CTCAAACAATTCGTTTCCGGCGCGCG CTGATT CGCGCGCCTCCAACAAATCGTTTGAG CGGAAATGTCCTGCG TERM 1124 967376 - 967331 - f 82 -10.4 -3.87149 | opp_overlap 967294 967331 967334, overlap 967325 967334 TTGAGTAAACTCAAA CAATTCGTTTCCGGCGCGCG CTGATT CGCGCGCCTCCAACAAATCG TTTGAGCGGAAATGT TERM 1125 967373 - 967334 - f 78 -8.5 -4.05629 | opp_overlap 967294 967334 967331, overlap 967331 967325 AGTAAACTCAAACAA TTCGTTTCCGGCGCGCG CTGATT CGCGCGCCTCCAACAAA TCGTTTGAGCGGAAA Paes_0886 967475 - 969214 + | ATP-dependent endonuclease of the OLD family-like protein TERM 1126 969257 - 969220 - f 76 -10.1 -3.38991 | gap 2, opp_overlap 969225 969245, overlap 969203 969224 969225 ACTGGCCTAACAAGA CAAATTCAGCGTACGCG GAATAT CGCG-ACGCTG-ATTTG CGACGTTATGTTTTT TERM 1127 969254 - 969224 - f 77 -7.6 -4.34263 | gap 1, opp_overlap 969225 969245, overlap 969203 969220 969225 GCCTAACAAGACAAA TTCAGCGTACGCG GAATAT CGCG-ACGCTGAT TTGCGACGTTATGTT TERM 1128 969253 - 969225 - f 78 -11.1 -3.19835 | gap 1, opp_overlap 969225 969245, overlap 969203 969224 969220 CCTAACAAGACAAAT TCAGCGTACGCG GAATAT CGCG-ACGCTGA TTTGCGACGTTATGT TERM 1129 969225 - 969253 + F 89 -11.8 -3.58801 | gap 1, opp_overlap 969203 969225 969224 969220, overlap 969245 CCTAACAAGACAAAT TCAGCGTACGCGG AATA TCGCG-ACGCTGA TTTGCGACGTTATGT TERM 1130 970146 - 970128 - g 70 -4.4 -4.48987 | opp_overlap 970137, overlap 970129 CGGCGATAATTAAAA TCCTCTCC AGA GGCGGGGA AGGAAAATCCACGTT Paes_0887 969329 - 973348 + | Tetratricopeptide domain protein TERM 1131 973544 - 973560 + F 100 -13.7 -3.55444 | opp_overlap 973544 CCACAAACAAAAAAA GCGGCCA GTG TGGCCGC TTTAAACAGTGAGCA TERM 1132 973560 - 973544 - f 100 -13.7 -6.02919 | opp_overlap 973544 CCACAAACAAAAAAA GCGGCCA GTG TGGCCGC TTTAAACAGTGAGCA Paes_0888 973972 - 975453 + | alternate F1F0 ATPase, F1 subunit beta Paes_0889 975443 - 975847 + | alternate F1F0 ATPase, F1 subunit epsilon Paes_0890 975840 - 976175 + | F0F1-ATPase subunit TERM 1133 976465 - 976455 - g 75 -4.6 -4.73613 | TCATCAGGAACAAAA GGAG GTG CCCC ATGCATCTGAGCGGT Paes_0891 976168 - 976482 + | F1/F0 ATPase, Methanosarcina type, subunit 2 TERM 1134 977005 - 977017 + G 77 -6.2 -4.71318 | overlap 977002 977008 TATCGGGATCCTGCT CGGC ATCGC GCCG TTGTTTTTTCCTGTT TERM 1135 977008 - 977020 + G 82 -3.3 -5.30189 | overlap 977002 977005 CGGGATCCTGCTCGG CATCG CGC CGTTG TTTTTTCCTGTTCTG Paes_0892 976466 - 977137 + | alternate F1F0 ATPase, F0 subunit A TERM 1136 977222 - 977259 + G 75 -11.3 -3.02144 | gap 1, overlap 977251 GCCTCAATCGTCACA GCCGGGCTGACTACTGCT ATC GGCTGTA-TCGGTCCGGC TCTTGGAGAGGGTCG Paes_0893 977174 - 977461 + | alternate F1F0 ATPase, F0 subunit C TERM 1137 977672 - 977662 - g 75 -5.4 -4.62069 | overlap 977666 GCTGCAGCGGAAAAA CGAA GCA TTCG ACAATGCTCACGCTC TERM 1138 977753 - 977729 - g 70 -4.2 -4.72272 | overlap 977730 977748 GCTGTCGAGGAAAAA CGTACGCTGC TCAAT GAAGCGCACA GGGAGTACGATGCAC Paes_0894 977465 - 978226 + | alternate F1F0 ATPase, F0 subunit B TERM 1139 979413 - 979438 + G 78 -8.5 -4.17089 | gap 1 GCACTGAAACTCGGG TTTTCGCAGTTC GAG GAACTG-GAAAA TTTTGCGCGTTTCGG Paes_0895 978246 - 979772 + | alternate F1F0 ATPase, F1 subunit alpha Paes_0896 979769 - 980647 + | alternate F1F0 ATPase, F1 subunit gamma Paes_0897 980930 - 981499 + | hypothetical protein Paes_0898 982640 - 981513 - | Cyclopropane-fatty-acyl-phospholipid synthase TERM 1140 982044 - 982058 + g 85 -2.8 -5.36965 | GACCGGCAGTTCTCC GTTGAG CTC TTCAGC TTTTTTCTGCTGTTC Paes_0899 983650 - 982691 - | aldo/keto reductase Paes_0900 985411 - 983741 - | sulfate transporter TERM 1141 985041 - 985006 - G 80 -5.4 -5.00616 | gap 1, overlap 985009 TCTGGGTTGAAAAAA TGA-TGACGGCTATACC GCT GGTGAAGCCGACAATCA CGGGGTAGGGGATGA TERM 1142 985576 - 985536 - R 74 -10.6 -2.80732 | gap 2, opp_overlap 985562, overlap 985529 985535 ACATGAAGCTGAAAT CCAGAGGATAGAGC--TCGC ATT GCTATCGCTCTATCCTCCGG GGAAGGTGCGCTTTA Paes_0901 987178 - 985589 - | peptide chain release factor 3 TERM 1143 985658 - 985696 + g 74 -7.4 -4.06419 | TTCCATCGCGACTTT GAGCATCCATTCGCTTTC GGC GAAAAAGACAGGATGCTC TTCTTTATCGAGAGC TERM 1144 986980 - 986995 + g 84 -7.6 -4.71061 | opp_overlap 986982, overlap 986976 TTACCGAGGTTGCAA CAGAGA TGCC TCTCTG TTTTTCGATCTCCAT TERM 1145 988146 - 988167 + G 70 -10.1 -3.16564 | overlap 988148 CTTGAAGCTGTCAGC CGCTCAGGC CTCC GTCTGGGCG TTGATCCGCTCGGGG Paes_0902 987468 - 989111 + | phosphoglucomutase, alpha-D-glucose phosphate-specific Paes_0903 989363 - 989929 + | Inorganic diphosphatase TERM 1146 991491 - 991470 - g 81 -4.4 -5.07107 | gap 1, opp_overlap 991483, overlap 991460 GAAATCGCCAAAAAA GCG-CATGC TGATG GCACGACGC TCCGTCAGGCGGCAG Paes_0904 990186 - 991583 + | fumarate hydratase, class II TERM 1147 991633 - 991658 + F 100 -11.2 -5.86465 | TTCCGAACCTGCCAT GCGGTTGCGA CGTTGT TCGTAACCGC TTTTTTTATATTCTT Paes_0905 991729 - 992619 + | protein of unknown function DUF344 TERM 1148 992888 - 992903 + F 80 -4.7 -5.26247 | opp_overlap 992886, overlap 992886 992888 CAGAAGGGATGAAGC CAGGA GACCTG TCCTG TTTTCTTTGTTTTCC TERM 1149 995094 - 995118 + G 84 -4.1 -5.27923 | opp_overlap 995097, overlap 995095 995097 CCTCTCTGTGCCGAC GAAGGCAACGC AGT GCGATGCCTGG TTTTTTCTCGCATTG TERM 1150 995115 - 995097 - g 70 -10.2 -3.14132 | opp_overlap 995095 995094 995097 CTCTGTGCCGACGAA GGCAACGC AGT GCGATGCC TGGTTTTTTCTCGCA TERM 1151 995097 - 995115 + G 74 -10.2 -3.44801 | opp_overlap 995097, overlap 995095 995094 CTCTGTGCCGACGAA GGCAACGC AGT GCGATGCC TGGTTTTTTCTCGCA Paes_0906 993084 - 995231 + | anaerobic ribonucleoside-triphosphate reductase Paes_0907 995228 - 995983 + | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 1152 996015 - 996043 + T 100 -15.4 -5.49579 | TTCTTCTCCGTTACA CCTGCTCTGGAC ATCTG GTTCAGAGCAGG TTTTGTTTTTTCTGC Paes_0908 996881 - 996069 - | modD protein TERM 1153 996727 - 996751 + g 81 -4.3 -5.11937 | opp_overlap 996726, overlap 996728 996744 TTTTTGAGCAGAGAT GTTTCGGCA CCCAGCA TGCCGAAAA TTTTTTCCGCTTCTT TERM 1154 997368 - 997380 + H 80 -5.5 -5.04597 | GCGGCAGCTCTGCGC GTCTC TCT GAGGC TTTTTCTATATCGCT Paes_0909 997562 - 998083 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family Paes_0910 998138 - 999007 + | N-acetylneuraminate synthase TERM 1155 1000818 - 1000802 - g 73 -3.5 -4.78107 | opp_overlap 1000802, overlap 1000804 GACGACGAGGAAAAA GAGTCGG TAT CCGGCAC TATGATCGAATCGCT Paes_0911 999323 - 1001206 + | heat shock protein Hsp90 TERM 1156 1001960 - 1001980 + G 75 -5.4 -4.65838 | CTCTGGCCTTTGGCG GTGCGGTA TGTAT TATCGCGC TTTTTAACCTCTATG TERM 1157 1002092 - 1002103 + G 77 -5.8 -4.66833 | TTCTGGCGGGGATGG CAGC TCGA GCTG TTTTTGGCATTGAGG Paes_0912 1001248 - 1002123 + | protein of unknown function DUF125 transmembrane Paes_0913 1003674 - 1002124 - | hypothetical protein TERM 1158 1002198 - 1002231 + g 70 -4 -4.70659 | gap 2, opp_overlap 1002203, overlap 1002198 1002201 1002203 TATTGACTTTTATGG CA--ACAGCTTCTTCC TGCA GGGAGAGGCTGTCCTG TTTTTCCATCTGCCG TERM 1159 1002201 - 1002226 + g 75 -11.9 -3.02902 | opp_overlap 1002203, overlap 1002198 1002198 1002203 TGACTTTTATGGCAA CAGCTTCTTCC TGCA GGGAGAGGCTG TCCTGTTTTTCCATC TERM 1160 1002266 - 1002285 + g 72 -8.6 -3.76968 | overlap 1002243 AGGATCTCTATGCCG GCTTCTGA CGCA TCGGAAGC TTTACTGAGTCGGTT TERM 1161 1003701 - 1003716 + H 70 -5.4 -4.38154 | overlap 1003693 TTGATAACGTTTAGA GCGCTT TGAC AAGTGC TTTTCTGAAAGCTAT TERM 1162 1003770 - 1003783 + H 74 -3.7 -4.94058 | overlap 1003771 GCTGTCGGTTTCTTG ACGCC TGCA GGCGG TTTTGTTTCAGTTGC TERM 1163 1004114 - 1004103 - g 70 -5.8 -4.18018 | overlap 1004105 CCGCGTCAGGGAAAA GACG ATGT CGTC ACCGAGGAGTTCCGT Paes_0914 1003917 - 1004381 + | UspA domain protein TERM 1164 1004651 - 1004617 - g 76 -3.5 -4.96028 | gap 1 TGCCAAAAAAAACAA GCCCTCCATC-TCAGC CCCT GCTGAAGATTCCGGGC GTCTGACAGCGGTGA Paes_0915 1004432 - 1004701 + | sodium pump decarboxylase, gamma subunit Paes_0916 1004766 - 1006598 + | biotin/lipoyl attachment domain-containing protein TERM 1165 1006606 - 1006641 + F 90 -9 -4.64334 | opp_overlap 1006606 TCGGTTAAGCAACAT GTTATCCCCTGTTACA GCAA TGATGCGGGGGATAAC TTTTATTCCAAGATT Paes_0917 1006676 - 1008235 + | sodium ion-translocating decarboxylase, beta subunit TERM 1166 1008308 - 1008258 - T 89 -14.6 -3.04461 | gap 2, opp_overlap 1008270, overlap 1008270 GAGCTATTCTGAACA TTCATAA--AAAAAGGCTGTTGTG ATTGA CACAACAGCCTTTTTTGTTATGAA GACGATCGCAAGTGC TERM 1167 1008294 - 1008270 - T 100 -14.4 -5.65177 | opp_overlap 1008270, overlap 1008258 ACATTCATAAAAAAA GGCTGTTGTG ATTGA CACAACAGCC TTTTTTGTTATGAAG TERM 1168 1008270 - 1008294 + T 100 -14.4 -5.55769 | opp_overlap 1008270 1008258 ACATTCATAAAAAAA GGCTGTTGTG ATTGA CACAACAGCC TTTTTTGTTATGAAG Paes_0918 1009532 - 1008333 - | internalin-related protein TERM 1169 1009132 - 1009146 + g 71 -2.8 -4.74132 | overlap 1009134 TTTGATGGATCGTCT GACGTT TTT AACGTG TTTTTGATCACCTCT Paes_0919 1009870 - 1012254 + | Kojibiose phosphorylase Paes_0920 1012256 - 1013344 + | glycosyl transferase group 1 TERM 1170 1013369 - 1013396 + F 72 -5.6 -4.53034 | gap 1, overlap 1013369 1013370 GGAAAATGTTATACT CTT-TTCTGAGCG TCG CGCTCGGAACACG TTTTGGTTATCTCGC TERM 1171 1014349 - 1014371 + G 76 -10.6 -3.31726 | opp_overlap 1014342, overlap 1014348 CTCCAATACGGCAGC CATAGCCGCA AAG TGCAGCTATG TGTTCTGTCAGCAGG TERM 1172 1014428 - 1014452 + G 75 -11.5 -3.12351 | opp_overlap 1014434 CCTGAAGGGTTTTCC GATGAAGCAGA ATA TCTGCGTCATC TTACCTATGAAGGCG TERM 1173 1015790 - 1015777 - g 79 -2.3 -5.28942 | CATGGGAAAGAAAAA GCCTG AGAT CATGC AGAAGTTCAAGGCTG TERM 1174 1016377 - 1016403 + G 84 -4.2 -5.26316 | opp_overlap 1016377 CGGCCAGTTGCAGAA CCGCTCTGTGAC GCT GGGGCAGTGCGG TTTTTTCTCCGATGA TERM 1175 1016707 - 1016726 + G 77 -7.2 -4.57837 | TATAGAGGATTTCAG CGGTAAAG CCGA TTTTACCG TTTTTGCGAGCGTCT Paes_0921 1013549 - 1017121 + | DNA polymerase III, alpha subunit Paes_0922 1017290 - 1017616 + | thioredoxin TERM 1176 1017628 - 1017652 + F 100 -13.6 -5.39721 | overlap 1017630 TTGATAGGCCTTTTC TGCCGGGGTG CTTCA CACCCCGGTA TTTTTTATCTGATCC TERM 1177 1017630 - 1017650 + F 100 -14 -4.32846 | overlap 1017628 GATAGGCCTTTTCTG CCGGGGTG CTTCA CACCCCGG TATTTTTTATCTGAT Paes_0923 1017739 - 1018674 + | thioredoxin reductase Paes_0924 1019129 - 1018728 - | NUDIX hydrolase Paes_0925 1020600 - 1019146 - | two component, sigma54 specific, transcriptional regulator, Fis family TERM 1178 1019754 - 1019772 + g 100 -3 -5.93809 | opp_overlap 1019751, overlap 1019758 TGGCAGAAATGAGGC GGAAGTCC ACC GGGCGTTC TTTTTTTTCTCCCAC TERM 1179 1020789 - 1020801 + H 76 -6.3 -4.49041 | ATTTGAGCGAATCTG TCTCA GGG TGAGA TTCTTTTGCTTTTTT Paes_0926 1020935 - 1021147 + | hypothetical protein Paes_0927 1022086 - 1021127 - | hypothetical protein TERM 1180 1021277 - 1021259 - G 78 -11 -3.53012 | GTCGTTGCTGGTAAA GCAGATCG ATT CGACCTGC CCTGTGTGGCGGAGG Paes_0928 1022254 - 1022673 + | hypothetical protein Paes_0929 1023284 - 1022634 - | tRNA guanosine-2'-O-methyltransferase TERM 1181 1023385 - 1023357 - H 70 -5.4 -4.35095 | gap 1, opp_overlap 1023383, overlap 1023365 AAAAAAATCCGAAAA TGAACAAT-TCGC TGAA GCGACATGGTTCA GAATTGACTGATTGC TERM 1182 1024142 - 1024126 - g 86 -3.7 -5.38054 | overlap 1024127 TTTTATAAACAAAAA GTTTACG CTG CGTAAAA ACCGTCTGACCCTCA TERM 1183 1025521 - 1025554 + G 84 -3.7 -5.24531 | opp_overlap 1025505 CCTCGATTTTGCTGT CGAGGACGGCAGGGT GACG ACAAAGCCGTTTTCG TTTTTTGTCAACGAT Paes_0930 1023437 - 1026172 + | hypothetical protein TERM 1184 1026695 - 1026710 + G 82 -7.6 -4.45664 | ATCACCGCCAAGTGG GCTCAT ATGT ATGAGC TTTTCCTTCGCTTCA Paes_0931 1026428 - 1027501 + | hypothetical protein TERM 1185 1027985 - 1028024 + G 75 -11.6 -3.05463 | gap 1, overlap 1027972 1027970 1027967 1027988 GAGCGTTTCGATGTC GAAGG-GCTCTGCTTTGAC CCC GTTGAAGGAGAGCTCCTTC TTGCCTGCAAGCAAT Paes_0932 1027532 - 1028443 + | hypothetical protein TERM 1186 1030503 - 1030515 + G 72 -4.9 -4.64766 | overlap 1030482 1030480 CCGGTACAACAGGTC TTGAT ATT ATCAA TTTTTACGGTCTGGG Paes_0933 1028639 - 1031380 + | hypothetical protein TERM 1187 1031407 - 1031444 + F 100 -18.8 -6.13503 | ACGTCCTCTATTCGG CCTGTTATCGATAGAA GAGCCG TTCTATCGATAACAGG TTTTTTTTGTTCGTA TERM 1188 1031576 - 1031598 + G 73 -4.2 -4.74285 | TATGATCGCATTCTA CGGCTATA TGGTCTT TATAGCTG TTTTCTCTTATGCGT TERM 1189 1032464 - 1032480 + G 81 -7.3 -4.62069 | ACAGATTCTGCTGTC GGAAGAG CTG CTCTTTC TTTTTCCAGTGAAGC TERM 1190 1032495 - 1032506 + G 74 -5.8 -4.54404 | CTTTTTCCAGTGAAG CTGC TGAA GCAG TTTATTATTCGTTTC Paes_0934 1031499 - 1032590 + | putative adenylate/guanylate cyclase Paes_0935 1033787 - 1032597 - | metal dependent phosphohydrolase TERM 1191 1033173 - 1033184 + g 100 -2.2 -6.09888 | CTTTTTTGTCTTTTT CTGT TCCT GCAG TTTTTTTTCTTCGAG TERM 1192 1034462 - 1034486 + G 95 -15.9 -3.05596 | opp_overlap 1034455, overlap 1034464 1034466 CGATTCAACTGGGTG GAGACCAGTAA CCG TTACTGGTCTC TTCCATCGGGCCATG TERM 1193 1034464 - 1034484 + G 79 -12.7 -3.08679 | opp_overlap 1034455, overlap 1034462 1034466 ATTCAACTGGGTGGA GACCAGTAA CCG TTACTGGTC TCTTCCATCGGGCCA Paes_0936 1033925 - 1034785 + | phosphoesterase PA-phosphatase related Paes_0937 1035461 - 1034802 - | HAD-superfamily hydrolase, subfamily IA, variant 1 Paes_0938 1036142 - 1035486 - | Methyltransferase type 11 TERM 1194 1036274 - 1036259 - H 72 -7.6 -4.13767 | TGCTGTAGCGTAAAA GAAGGT AAAC ACCTTC AAGGCTATTGCAAAA TERM 1195 1037066 - 1037110 + G 82 -9.2 -4.16016 | opp_overlap 1037064 ATCGCTGAGTACAGG GCTGCATCGGCACGGACAGG ACGAG CCGGTCTCTGCCGATCCACC TTTCTTGCAGCCTGC Paes_0939 1036403 - 1037251 + | phospholipid/glycerol acyltransferase Paes_0940 1037239 - 1037892 + | hypothetical protein Paes_0941 1037935 - 1038186 + | hypothetical protein Paes_0942 1038388 - 1039509 + | hypothetical protein TERM 1196 1039603 - 1039631 + F 83 -3.8 -5.40072 | gap 1 GTGGTGCCGATTAAA GCCCTCTTTGTCT TGTA GGGCGG-GAGGGC TTTTTTTGAAAGGGG Paes_0943 1039694 - 1040512 + | phosphate binding protein TERM 1197 1040560 - 1040575 + F 100 -11.8 -5.96219 | GTTATCGTGTTGGAG CCGCCC GCAA GGGCGG TTTTTTTTATAGGTG TERM 1198 1040901 - 1040913 + G 91 -7.7 -5.09426 | TTTATTTCGTCGCCA GGGAT GCA ATCCC TTTTTTCCAGTTGAG TERM 1199 1041335 - 1041346 + G 81 -4.4 -5.11063 | overlap 1041341 CGATCTCGTAAAAGG GTTC TGCT GAAC TTTTTGTTCGGTGCT Paes_0944 1040735 - 1041898 + | phosphate ABC transporter, inner membrane subunit PstC Paes_0945 1041949 - 1043298 + | phosphate ABC transporter, inner membrane subunit PstA Paes_0946 1043304 - 1044167 + | phosphate ABC transporter, ATPase subunit Paes_0947 1044194 - 1044880 + | phosphate uptake regulator, PhoU TERM 1200 1045086 - 1045065 - g 71 -2.1 -5.00884 | overlap 1045067 1045069 ACTTTTCGGAAAAAA GTCAGGTCC ATCC GGATCCGGC AAGGGTATTGAGAAG Paes_0948 1045045 - 1045788 + | phosphate uptake regulator, PhoU TERM 1201 1045830 - 1045853 + F 100 -11.8 -5.71712 | opp_overlap 1045826 1045830 AAAGGCAATAAGGAA GGGCGAAAAG ATAC TTTTTCGCCC TTTTTTTCTGTGAGC TERM 1202 1045853 - 1045830 - f 81 -11.1 -3.56576 | opp_overlap 1045830, overlap 1045826 AAAGGCAATAAGGAA GGGCGAAAA GATACT TTTTCGCCC TTTTTTTCTGTGAGC TERM 1203 1045867 - 1045878 + F 100 -7.2 -5.93809 | CCTTTTTTTCTGTGA GCGC GGCT GCGC TTTTTTTTATGCACA Paes_0949 1045924 - 1046334 + | hypothetical protein Paes_0950 1046324 - 1047607 + | hypothetical protein TERM 1204 1048294 - 1048270 - g 74 -8.5 -3.86822 | overlap 1048272 CAATGGGCGGAGAAA CATCATGCCCG CTA CGTGCATGAAG AGCCTGCAGTCTCCT TERM 1205 1048292 - 1048272 - g 74 -9.7 -3.52113 | overlap 1048270 ATGGGCGGAGAAACA TCATGCCCG CTA CGTGCATGA AGAGCCTGCAGTCTC TERM 1206 1048751 - 1048768 + G 72 -8.5 -3.71848 | opp_overlap 1048747 TCTTTGCAAACGCGA TTGTCGA TGCT TCGACAA TTCTTGATACCGGCC Paes_0951 1047661 - 1048842 + | pentapeptide repeat protein Paes_0952 1048878 - 1049708 + | glycosyl transferase family 2 Paes_0953 1049771 - 1051060 + | hypothetical protein TERM 1207 1051798 - 1051824 + G 74 -8.1 -4.14615 | gap 1, overlap 1051810 1051812 TCAAAAAAGAACTGG GGGCAATTGTCG GTGT CGACAA-TGTCC TTTTCGACCCTTTTT TERM 1208 1052003 - 1052028 + G 100 -14.7 -3.4252 | AGGATTGACCGGTGG CGCGGTTCCGC TTCA GCGGGACTGCG TTATCATCAATACCG TERM 1209 1053239 - 1053249 + G 75 -5.4 -4.63542 | GGAGTTTCGTCATGA GTTC AAT GAAC TTTTTCACGGTTATC TERM 1210 1054868 - 1054856 - g 72 -7.7 -3.91897 | CGCCGGATCGAGAAA GGTCA TAC TGACC AACTGTCCGTCTTGT Paes_0954 1051359 - 1055024 + | FAD linked oxidase domain protein TERM 1211 1055008 - 1055033 + F 83 -7.5 -4.77157 | opp_overlap 1055010 AGGCAGCGCGGGCAA CAGCCGTGAGC TTCT GATCACTGCTG TTTTTGATGACTTCA TERM 1212 1055047 - 1055071 + F 100 -16.5 -4.92812 | TGTTTTTGATGACTT CAGGCCCCGTT TTT AACGGGGCTTG TTTGTTTTGTTATCA Paes_0955 1055218 - 1055442 + | hypothetical protein TERM 1213 1055523 - 1055485 - f 75 -9.6 -3.53012 | gap 1, opp_overlap 1055486 1055487, overlap 1055487 TCCGCTTCTGCCAAA CAGGGAGTGGTCGGTGA GAGTGT TTACCGACCGCTCCC-G TTTACGGATTTCCGC TERM 1214 1055486 - 1055523 + F 100 -14.9 -3.63968 | opp_overlap 1055485 1055487, overlap 1055487 CCGCTTCTGCCAAAC AGGGAGTGGTCGGTGAG AGTG TTTACCGACCGCTCCCG TTTACGGATTTCCGC TERM 1215 1055487 - 1055522 + F 100 -18.4 -2.7806 | opp_overlap 1055485 1055487, overlap 1055486 CGCTTCTGCCAAACA GGGAGTGGTCGGTGAG AGTG TTTACCGACCGCTCCC GTTTACGGATTTCCG TERM 1216 1055522 - 1055487 - f 95 -13.3 -3.34398 | opp_overlap 1055487 1055486, overlap 1055485 CGCTTCTGCCAAACA GGGAGTGGTCGGTGA GAGTGT TTACCGACCGCTCCC GTTTACGGATTTCCG TERM 1217 1055651 - 1055664 + G 91 -9.5 -4.67234 | opp_overlap 1055629 1055641 GGAGAGCGGGCCCTG GCCGG AGCC CCGGC TTTTTGGCGTTGCGT TERM 1218 1056491 - 1056525 + G 73 -11.5 -2.55351 | overlap 1056490 GGTCAGTCTCGAGGG CCTCGAGCCTCATAA CGATT TTATGAGGGGCGAGG GTTACTATAGACGCG Paes_0956 1055550 - 1057148 + | Radical SAM domain protein Paes_0957 1057245 - 1058459 + | aminotransferase class I and II TERM 1219 1058598 - 1058630 + G 73 -11.5 -2.70932 | gap 1, overlap 1058603 GGTCGCCGATCTGCT CGACATCCTGAACG CCAACC CGTTCAGGAT-TCG TGCTTACCGCAACGC TERM 1220 1058603 - 1058626 + G 74 -11.1 -3.27298 | overlap 1058598 CCGATCTGCTCGACA TCCTGAACG CCAACC CGTTCAGGA TTCGTGCTTACCGCA Paes_0958 1058542 - 1060266 + | PHP domain protein TERM 1221 1060483 - 1060473 - g 74 -8.2 -3.96327 | opp_overlap 1060479, overlap 1060474 ACCGCTGAGCATAAA GGGC GCT GCCC CATGGGGCATTGTGA Paes_0959 1060351 - 1060884 + | hypothetical protein Paes_0960 1061640 - 1061128 - | protein of unknown function DUF1648 Paes_0961 1061879 - 1063120 + | hypothetical protein Paes_0962 1063173 - 1063547 + | hypothetical protein Paes_0963 1063646 - 1064128 + | GCN5-related N-acetyltransferase TERM 1222 1064344 - 1064361 + F 100 -7.7 -5.49809 | gap 1, overlap 1064348 TTCCGATTCGTTCAG GCATGGGG TGA CCCC-TGC TTTTTTTGCCGTTTG TERM 1223 1064720 - 1064734 + F 91 -10 -4.75309 | AACAGATACGTATTG CGCTTG GAT CAAGCG TTTTGTTCGCTTTCA TERM 1224 1064892 - 1064908 + F 71 -9.5 -3.05046 | opp_overlap 1064894 1064898, overlap 1064891 1064894 TTTATTGTCTTTATA CAGAAAG CAG CTTTCTG CTTTTCCGGAAATAG Paes_0965 1065007 - 1065243 + | hypothetical protein Paes_0966 1065240 - 1065569 + | hypothetical protein TERM 1225 1065909 - 1065893 - g 82 -2.1 -5.34055 | overlap 1065895 ACAAACACGAAAAAA GAGATGG TTA CCTTCAC ACAAGATGAGTGGAA Paes_0967 1065764 - 1065967 + | putative regulator TERM 1226 1065979 - 1066010 + F 86 -9.4 -4.37886 | opp_overlap 1065985, overlap 1065985 TTAACTCGACCTTTA GAAAAAGCAGTCCG CAAG CGGGCTGCTTAATC TTTTATGAACAATAG TERM 1227 1066004 - 1065985 - f 90 -9.2 -4.84359 | opp_overlap 1065979 1065985 CGACCTTTAGAAAAA GCAGTCCG CAAG CGGGCTGC TTAATCTTTTATGAA TERM 1228 1065985 - 1066004 + F 87 -11.4 -3.57825 | opp_overlap 1065985, overlap 1065979 CGACCTTTAGAAAAA GCAGTCCG CAAG CGGGCTGC TTAATCTTTTATGAA Paes_0968 1066015 - 1067229 + | hypothetical protein Paes_0969 1067903 - 1067649 - | transposase IS116/IS110/IS902 family protein Paes_0970 1068406 - 1069338 + | HpcH/HpaI aldolase TERM 1229 1069405 - 1069378 - f 83 -6.2 -5.16237 | opp_overlap 1069381, overlap 1069380 1069381 AAGTCGAGGAAAAAA GATGGCCGATGC GATA ACATCGGCCTTA TTATTGATAGACTGG TERM 1230 1069403 - 1069380 - g 78 -8.8 -4.20707 | opp_overlap 1069381, overlap 1069378 1069381 GTCGAGGAAAAAAGA TGGCCGATGC GATA ACATCGGCCT TATTATTGATAGACT TERM 1231 1069402 - 1069381 - g 79 -12.3 -3.11701 | opp_overlap 1069381, overlap 1069380 1069378 TCGAGGAAAAAAGAT GGCCGATGC GATA ACATCGGCC TTATTATTGATAGAC TERM 1232 1069381 - 1069402 + G 90 -11.6 -3.99374 | opp_overlap 1069381 1069380 1069378 TCGAGGAAAAAAGAT GGCCGATG CGATAA CATCGGCC TTATTATTGATAGAC Paes_0971 1069379 - 1069543 + | hypothetical protein TERM 1233 1069981 - 1070010 + F 76 -4.2 -5.11937 | overlap 1069983 CATCCACCCAGGACG CACCTTCAGACT GCGTGG AGGCTGGAGGCG TTTTTTGCAGTTATT TERM 1234 1070540 - 1070509 - f 79 -8 -4.37247 | gap 1, overlap 1070510 1070511 AAACGAACTAATAAA CTGGTTCCAGTCGAC TAC GTCGCCTGGAATC-G CGGCGCTCACTTCGT TERM 1235 1070539 - 1070511 - f 79 -11.7 -2.51348 | overlap 1070509 1070510 ACGAACTAATAAACT GGTTCCAGTCGAC TAC GTCGCCTGGAATC GCGGCGCTCACTTCG TERM 1236 1070559 - 1070591 + F 100 -17.7 -3.05844 | CGCTCACTTCGTTCG GCCTTGTCCCGTCGC CTT GCGCCGGAACAAGGC TCTTCACCTGACGGC Paes_0973 1070681 - 1071352 + | hypothetical protein TERM 1237 1071360 - 1071346 - f 79 -2.8 -5.42259 | GGAGCCGCAAAAAAA TGGC TAACACT GCCA TAAACTCGGACCACA Paes_0974 1071468 - 1071710 + | hypothetical protein Paes_0975 1072716 - 1074098 + | hypothetical protein Paes_0976 1074080 - 1074568 + | hypothetical protein TERM 1238 1074768 - 1074790 + G 72 -4.8 -4.70659 | AAAGAAGATTGAGGT CAAGCGTTTC TCG GATACACTTG TTTTTACCTATAGAG Paes_0977 1074586 - 1075575 + | hypothetical protein Paes_0979 1079357 - 1076661 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC Paes_0980 1080412 - 1079525 - | UbiA prenyltransferase TERM 1239 1079733 - 1079720 - G 71 -2.3 -4.90525 | GAAGGTGAAAGAAAA CAGGA GAAG TCCGG AGAGCACGCTGGTGA Paes_0981 1080789 - 1080604 - | hypothetical protein Paes_0982 1081244 - 1081002 - | hypothetical protein TERM 1240 1081065 - 1081047 - G 77 -10.3 -3.57883 | ATAATACTCCTGAAA CCGAAGC TGCTT GCTTCGG TGAATAAAATCGTGC TERM 1241 1081173 - 1081184 + g 76 -3.6 -4.9218 | CTTCATCCCGACTTG TCGG GACT CCGG TTTTTGTGCTCCGTC Paes_0983 1082318 - 1081293 - | hypothetical protein Paes_0985 1083566 - 1082973 - | tRNA (guanine-N(7)-)-methyltransferase Paes_0986 1083949 - 1084824 + | HtpX domain protein TERM 1242 1084857 - 1084877 + F 100 -14 -4.64861 | opp_overlap 1084851 CATCCAACATGCTTA GCCCCGCA CGACC TGCGGGGC TTTGTTTTGAACGCA TERM 1243 1084959 - 1084993 + F 80 -6.5 -4.8048 | gap 1, overlap 1084960 1084963 TTAGCGAGATTGTTG T-TTTCGATGCAGGGG CTTG CCGCTGCATCGTAATA TTTTTGGTATCAGCA TERM 1244 1084960 - 1084991 + F 91 -11.6 -4.02302 | overlap 1084959 1084963 TAGCGAGATTGTTGT TTTCGATGCAGGGG CTTG CCGCTGCATCGTAA TATTTTTGGTATCAG TERM 1245 1084963 - 1084988 + F 86 -13.3 -3.0462 | overlap 1084960 1084959 CGAGATTGTTGTTTT CGATGCAGGGG CTTG CCGCTGCATCG TAATATTTTTGGTAT Paes_0987 1085087 - 1085713 + | DNA polymerase III, epsilon subunit TERM 1246 1086727 - 1086711 - g 74 -5.9 -4.49389 | ACTTGACAATGAAAA TGGAACA GGC TATTCCA TGCAGGAGGCTCAAC Paes_0988 1085776 - 1087479 + | zinc finger SWIM domain protein Paes_0989 1088070 - 1087573 - | hypothetical protein TERM 1247 1088050 - 1088060 + g 100 -5.4 -5.55664 | GAGGAATTTCTGTTG TGAC GGG GTCA TTTTTTTCATACTGG Paes_0990 1088901 - 1088113 - | Abortive infection protein TERM 1248 1089433 - 1089393 - g 88 -8.2 -4.72272 | opp_overlap 1089392 1089394 1089395 1089397, overlap 1089394 1089395 1089397 CTTTCGGACGAAAAA GGGATGGTGCACGGCG GTCATCTGG CGCCGGGCACCATCGT GTTTGCCTGTGAACT TERM 1249 1089394 - 1089432 + G 82 -11.7 -3.43773 | gap 1, opp_overlap 1089393 1089394 1089395 1089397, overlap 1089392 1089395 1089397 TTTCGGACGAAAAAG GGATGGTGCACGGCGGTC ATCT GGC-GCCGGGCACCATCG TGTTTGCCTGTGAAC TERM 1250 1089432 - 1089394 - g 82 -11.7 -3.43042 | opp_overlap 1089394 1089392 1089395 1089397, overlap 1089393 1089395 1089397 TTTCGGACGAAAAAG GGATGGTGCACGGCG GTCATCTGG CGCCGGGCACCATCG TGTTTGCCTGTGAAC TERM 1251 1089395 - 1089431 + G 95 -15.2 -2.65942 | gap 1, opp_overlap 1089394 1089393 1089395 1089397, overlap 1089394 1089392 1089397 TTCGGACGAAAAAGG GATGGTGCACGGCGGTC ATCT GGC-GCCGGGCACCATC GTGTTTGCCTGTGAA TERM 1252 1089431 - 1089395 - g 95 -15.2 -2.65504 | opp_overlap 1089395 1089394 1089392 1089397, overlap 1089394 1089393 1089397 TTCGGACGAAAAAGG GATGGTGCACGGCG GTCATCTGG CGCCGGGCACCATC GTGTTTGCCTGTGAA TERM 1253 1089397 - 1089429 + G 75 -12 -2.86838 | gap 1, opp_overlap 1089395 1089394 1089393 1089397, overlap 1089395 1089394 1089392 CGGACGAAAAAGGGA TGGTGCACGGCGGTC ATCT GGC-GCCGGGCACCA TCGTGTTTGCCTGTG TERM 1254 1089429 - 1089397 - g 75 -12 -2.86601 | opp_overlap 1089397 1089395 1089394 1089392, overlap 1089395 1089394 1089393 CGGACGAAAAAGGGA TGGTGCACGGCG GTCATCTGG CGCCGGGCACCA TCGTGTTTGCCTGTG Paes_0991 1089087 - 1089527 + | protein of unknown function DUF296 Paes_0992 1089544 - 1090524 + | Alcohol dehydrogenase GroES domain protein Paes_0993 1090533 - 1091624 + | anthranilate phosphoribosyltransferase TERM 1255 1091880 - 1091920 + T 100 -14.1 -4.72272 | gap 1, opp_overlap 1091889, overlap 1091881 GTGATCTGAGGGAGA CGCAGAGCAGCA-CCCCG CAATAT CGGGGATGCTGCTTTGCA TTTTTGGTGGCAGGA TERM 1256 1091881 - 1091919 + T 100 -17.6 -3.43042 | gap 1, opp_overlap 1091889, overlap 1091880 TGATCTGAGGGAGAC GCAGAGCAGCA-CCCCG CAATAT CGGGGATGCTGCTTTGC ATTTTTGGTGGCAGG Paes_0994 1093016 - 1091955 - | Cytochrome-c peroxidase TERM 1257 1092251 - 1092286 + g 86 -9 -4.37092 | opp_overlap 1092256 1092282, overlap 1092242 1092252 1092253 CCGAACGTCCTTCGA CAGGACTTGTTGCCTT GTAT GGGGCAACAAGTCCCA TTTTCTGGAAAGAGT TERM 1258 1092252 - 1092285 + g 81 -12.5 -3.21934 | opp_overlap 1092256 1092282, overlap 1092242 1092251 1092253 CGAACGTCCTTCGAC AGGACTTGTTGCCTT GTAT GGGGCAACAAGTCCC ATTTTCTGGAAAGAG TERM 1259 1092253 - 1092284 + g 95 -16 -2.52946 | opp_overlap 1092256 1092282, overlap 1092242 1092252 1092251 GAACGTCCTTCGACA GGACTTGTTGCCTT GTAT GGGGCAACAAGTCC CATTTTCTGGAAAGA Paes_0995 1094893 - 1093298 - | carbohydrate kinase, YjeF related protein TERM 1260 1093877 - 1093894 + g 75 -5.5 -4.69664 | overlap 1093862 GCATCCGATCAGGAT GCTGTCT GCCC AGGCGGC TTTTTCAATGATATC Paes_0996 1097190 - 1094914 - | phosphoribosylformylglycinamidine synthase II TERM 1261 1095198 - 1095216 + g 82 -3 -5.1861 | opp_overlap 1095202, overlap 1095200 1095202 TTTCCAGGTTAACGG CAAAGCCC ATC GGGCTCTC TTTTTTCATGATGGC TERM 1262 1095781 - 1095817 + g 73 -9.4 -3.64685 | opp_overlap 1095780 GGGATTGAGATAGAC GTATCTGGCATTGCAG TCGGT CTGCATTGCCAGACCC TTGTTGGAGCCTTTT TERM 1263 1096425 - 1096443 + g 73 -3.8 -4.82901 | overlap 1096413 1096426 ATGCAATGGCTTCCA ATGTTGCT TCG AGCAGCAG TTTTTCTGCGAAGGG TERM 1264 1096586 - 1096607 + g 70 -4.3 -4.55023 | ACCGGATTGCCTTGC CCTTCAGCG GTTG CACTGACGG TTTTGTGGTGTTCGA TERM 1265 1097263 - 1097274 + r 87 -5.8 -5.44837 | AAGATTGTCGTTTAC CTGC CGCA GCAG TTTTTATATTTTTTT Paes_0997 1100354 - 1097259 - | preprotein translocase, SecA subunit TERM 1266 1100421 - 1100400 - H 70 -7.3 -3.93583 | gap 1, opp_overlap 1100398 1100400 GAACGTATTCACAAA GGCCTCT-CC GAG GGCAGAAGCC TGTTACTTCACTGCT Paes_0998 1100711 - 1101787 + | phosphoesterase RecJ domain protein TERM 1267 1101924 - 1101892 - g 83 -5.6 -5.08011 | gap 2, overlap 1101895 AAAAGCCTTAAAAAA GATGCTCCGAAAGTGC TTG GCGCTCTCGG-GC-TC AATGACCGCGCACTG TERM 1268 1103223 - 1103235 + G 90 -9.1 -4.46212 | GGCTCACATCGATAT TGCCG GGC CGGCA TTTTCTGGTAAAGCC Paes_0999 1101784 - 1103319 + | Leucyl aminopeptidase Paes_1000 1103380 - 1104099 + | hypothetical protein Paes_1001 1104081 - 1104935 + | hypothetical protein Paes_1002 1106242 - 1104944 - | sodium:dicarboxylate symporter TERM 1269 1105208 - 1105184 - G 79 -9.9 -3.85698 | TGTTGCTGTGAGAAA GACGATGCCGA GTT CCGGCCCCGTC AGTATGATTCCGTTC TERM 1270 1106201 - 1106177 - G 83 -5.8 -5.0133 | gap 1, overlap 1106178 1106179 GACGGCTGGAAAAAA TC-CTCCGATA AGCG TACCGGAGAGA ATTCCTGCAAGAATG TERM 1271 1106334 - 1106354 + H 76 -4 -5.0666 | gap 1, overlap 1106338 AAGCTCATTTTTCAG GATG-CCGC TAAC GCGGTTATC TTTGTTTTTTCCCTC TERM 1272 1106338 - 1106349 + H 72 -7.2 -4.1348 | overlap 1106334 TCATTTTTCAGGATG CCGC TAAC GCGG TTATCTTTGTTTTTT TERM 1273 1106522 - 1106511 - g 100 -4.4 -5.5112 | TCGACGAAGAAAAAA TCAG TCGT CTGA AAAAGGGTGAAATCC Paes_1003 1106405 - 1107742 + | nucleotide sugar dehydrogenase Paes_1004 1108608 - 1107781 - | phosphomethylpyrimidine kinase TERM 1274 1107864 - 1107822 - G 74 -10.7 -3.17763 | gap 1 GGTAGAGGTGATCAA GAGGCCCGGATCCTTTTCCC AGAT GGAAAAATGATCCGG-CTTC AAGTGCTCCGAGAAG Paes_1005 1109266 - 1108658 - | thiamine-phosphate pyrophosphorylase Paes_1006 1109909 - 1109259 - | Thiamine-phosphate diphosphorylase TERM 1275 1109884 - 1109855 - G 100 -15.1 -5.79595 | opp_overlap 1109851 CGGGAAAAGAAAAAA CCCGGCTGTATGT GACC ATATACAGCCGGG GAAGTTCATGGCCTG Paes_1007 1110683 - 1109913 - | thiazole biosynthesis enzyme TERM 1276 1110227 - 1110203 - G 76 -9.3 -3.71848 | opp_overlap 1110194 CTGTTCCATCAAGAA CCGCTCGTGAT GTT ATGACAAGCGG ATCGACATGCATCTC Paes_1008 1111036 - 1111524 + | Endoribonuclease L-PSP Paes_1009 1112010 - 1111531 - | protein of unknown function DUF192 Paes_1010 1112762 - 1114405 + | carboxyl-terminal protease Paes_1011 1114484 - 1115140 + | cyclase/dehydrase Paes_1012 1115186 - 1115809 + | hypothetical protein Paes_1013 1116899 - 1115916 - | rfaE bifunctional protein TERM 1277 1117138 - 1117122 - g 79 -3.6 -5.03314 | overlap 1117123 GCGACCTTTAAAAAA CTCGCC GGTCA GGCGAC GATTAACGAGGTCAA TERM 1278 1117193 - 1117183 - g 75 -6.8 -4.34402 | TGCGCGATATCAAAA GAGC TCT GCTC GGTGCGGACGTTAAC TERM 1279 1117475 - 1117457 - g 70 -3.8 -4.61527 | opp_overlap 1117457, overlap 1117446 AAAACGTCTTAAAAA GAACGG GAAACAT CCGCTC CTTGTCGCTGCTGAC Paes_1014 1117077 - 1118426 + | signal recognition particle protein Paes_1015 1118467 - 1118874 + | ribosomal protein S16 Paes_1016 1118910 - 1119419 + | 16S rRNA processing protein RimM Paes_1017 1119472 - 1120185 + | tRNA (guanine-N1)-methyltransferase Paes_1018 1120204 - 1120572 + | ribosomal protein L19 TERM 1280 1120601 - 1120617 + F 100 -12.3 -5.60993 | opp_overlap 1120601 TATCAGCTTGAAAAA GCCTGAC TCC GTCAGGC TTTTTTTATGGACGC TERM 1281 1120617 - 1120601 - f 100 -12.3 -4.60487 | opp_overlap 1120601 TATCAGCTTGAAAAA GCCTGAC TCC GTCAGGC TTTTTTTATGGACGC TERM 1282 1120630 - 1120648 + F 74 -3.1 -5.1244 | gap 1, overlap 1120630 1120631 GGCTTTTTTTATGGA C-GCTCTC ATTT GGGAGCCG TTTTTCTGTTGCTGC TERM 1283 1121322 - 1121346 + G 70 -10.7 -2.70354 | CTGGTTCATGGAGGT GATCTGCTGCC CTC GGCAGCGCATC TGGGTTTGTCGAGAG Paes_1019 1120695 - 1121549 + | beta-lactamase domain protein Paes_1020 1121546 - 1122382 + | HhH-GPD family protein Paes_1021 1124268 - 1122445 - | AMP-dependent synthetase and ligase TERM 1284 1124641 - 1124666 + G 77 -8.9 -4.06864 | overlap 1124644 AACAACGCTTGCAGG GTATGCCGGGC TTCT GACCGGCATCC TTCTTCTTGTATGGC TERM 1285 1124884 - 1124913 + G 74 -10.7 -3.1676 | gap 1, opp_overlap 1124871, overlap 1124881 AACCGTTTCGATGAC GGTTC-CCGCCGGC GTA GCTGTCGGAGAACC TCTTCGTCCCTATCT Paes_1022 1124600 - 1125661 + | hypothetical protein TERM 1286 1126593 - 1126571 - g 70 -5.4 -4.32177 | opp_overlap 1126571, overlap 1126572 1126589 CCATTGCAGAATAAA TCGGCAGCCC GCA GGATAGCCGA TGTCTGCCGGCAGGT Paes_1023 1125665 - 1126621 + | hypothetical protein Paes_1024 1126652 - 1127341 + | acylneuraminate cytidylyltransferase TERM 1287 1127726 - 1127740 + G 78 -8.6 -4.18197 | TAATGCCGTTTCAGC CCTTTC TCT GAAAGG TTTTCCCTCCGACGT TERM 1288 1128150 - 1128160 + G 75 -6.8 -4.31043 | AATTCCGGAGATGGA CCGT CAA ACGG TTTTGCCTATTATCT TERM 1289 1128191 - 1128218 + G 72 -7.6 -3.86194 | gap 1, opp_overlap 1128188, overlap 1128194 1128195 CGGAGTGAAGCACCA GGTCCCGCACGGC CTG GCCG-GCGCGGTC TTTCTCAAGGAGGTT Paes_1025 1127382 - 1128512 + | iron-containing alcohol dehydrogenase TERM 1290 1129042 - 1129061 + G 86 -6.4 -5.13722 | opp_overlap 1129034 GACGCAAGCTCGGTA CGATCGGA CAGG TCGGATCG TTTTCTTTTGATGCC Paes_1026 1128537 - 1129700 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1291 1129726 - 1129749 + T 100 -11.1 -5.64873 | opp_overlap 1129726 CTGAAAATAAAAAAA GCTGTCTCA CATCGT TGAGACAGC TTTTTTGTTGTTGAG TERM 1292 1129749 - 1129726 - T 100 -11.1 -6.09196 | opp_overlap 1129726 CTGAAAATAAAAAAA GCTGTCTCA CATCGT TGAGACAGC TTTTTTGTTGTTGAG Paes_1027 1130217 - 1129906 - | hypothetical protein TERM 1293 1130263 - 1130277 + r 72 -3.6 -4.96028 | overlap 1130258 1130261 TTATTTTTGTTATTA GTAATA CTA TGTTAC TTCTTTTTTTTCAGA Paes_1028 1131026 - 1130274 - | Cobyrinic acid ac-diamide synthase Paes_1029 1132022 - 1131282 - | Cobyrinic acid ac-diamide synthase TERM 1294 1131915 - 1131888 - G 70 -5.4 -4.41494 | GATCCTGAAGTAAAA CGAGCTGGCCCC TTGA GGGTCAAGATCG CAGATAAGCACCGGT Paes_1030 1133695 - 1132019 - | CHAD domain containing protein Paes_1031 1133869 - 1134885 + | basic membrane lipoprotein Paes_1032 1134968 - 1135438 + | hypothetical protein TERM 1295 1135482 - 1135494 + G 81 -6.2 -4.81852 | opp_overlap 1135482, overlap 1135485 AAAAAGTATTAGTAA CCGG AGCAA CCGG TTTTATTGGTTCTCG TERM 1296 1135600 - 1135637 + G 73 -11.3 -2.68823 | overlap 1135599 1135602 TTCGGGGATTCTCGA CAGGGTTCGTCTCGTTG AAGG TGATGTGACGGACCCTG ATTCTCTCAAAAAAG TERM 1297 1136327 - 1136344 + G 84 -4.2 -5.30339 | TTCAATCTTTCGATG TTCAGA GTCGCG TCTGAA TTTTTGTATTTTGAT Paes_1033 1135460 - 1136458 + | NAD-dependent epimerase/dehydratase TERM 1298 1136708 - 1136720 + G 81 -6.9 -4.61231 | opp_overlap 1136708 TTCATGGTGATGAAA GGTGC TGT GCGCC TTTTTGAAGATATCG Paes_1034 1136492 - 1138474 + | putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase TERM 1299 1139012 - 1138999 - g 70 -5.2 -4.37092 | ATCTTGCCCATAAAA GCGG AGAGTA CCGC CTGGATTCGCTTCTT Paes_1035 1138467 - 1139165 + | DNA polymerase III, epsilon subunit Paes_1036 1139974 - 1139195 - | Methyltransferase type 12 TERM 1300 1140005 - 1140050 + r 77 -10 -3.53761 | opp_overlap 1140013, overlap 1140013 ATGAGGTATTTGGAG AGG-AATAACGGGGAAAAGCAG GTGG CTGTTTTTCCCCGT-ATTGCCA TTTCAGACGAGCTTA TERM 1301 1140042 - 1140013 - R 100 -15.1 -3.7732 | opp_overlap 1140013 1140005 TTTGGAGAGGAATAA CGGGGAAAAGCAG GTGG CTGTTTTTCCCCG TATTGCCATTTCAGA TERM 1302 1140013 - 1140042 + r 100 -17.3 -3.12668 | opp_overlap 1140013, overlap 1140005 TTTGGAGAGGAATAA CGGGGAAAAGCAG GTGG CTGTTTTTCCCCG TATTGCCATTTCAGA Paes_1037 1140254 - 1140063 - | hypothetical protein TERM 1303 1140116 - 1140132 + g 100 -4.4 -5.47218 | TCTGTTCATTTTCGC CGTTTG GTATG CGAACG TTTTTTTCCATGAAC Paes_1038 1141702 - 1140380 - | dihydroorotase, multifunctional complex type TERM 1304 1140816 - 1140838 + g 70 -7 -4.02736 | TCAAGGCTGCAGAGT GGCGGTTTCA TGA TGAAGTTGCC TTTGTGCTCTGCCTT Paes_1039 1142475 - 1141756 - | fumarylacetoacetate (FAA) hydrolase TERM 1305 1142045 - 1142015 - G 79 -4.7 -5.01497 | gap 1, opp_overlap 1142023, overlap 1142019 1142021 1142024 AGGATGAGAGAAAAA CCAAGAGAGGCCGG ATCT CCGGCATCT-TCAG CGGTTATGATATCCG TERM 1306 1142040 - 1142021 - G 71 -9.2 -3.52689 | opp_overlap 1142023, overlap 1142019 1142015 1142024 AGAGAAAAACCAAGA GAGGCCGG ATCT CCGGCATC TTCAGCGGTTATGAT TERM 1307 1142357 - 1142385 + g 77 -10.1 -3.65828 | overlap 1142358 GGGTCAGACTCATTC AGGGGCGGGAGCG TTG TGCCCCCGTCCCA TTTCAGCATTTCTCT TERM 1308 1142358 - 1142384 + g 85 -13.6 -2.78774 | overlap 1142357 GGTCAGACTCATTCA GGGGCGGGAGCG TTG TGCCCCCGTCCC ATTTCAGCATTTCTC Paes_1040 1142723 - 1143316 + | 5-formyltetrahydrofolate cyclo-ligase Paes_1041 1143335 - 1145476 + | Polyphosphate kinase Paes_1042 1145473 - 1145901 + | sugar-phosphate isomerase, RpiB/LacA/LacB family Paes_1043 1145917 - 1146600 + | putative signal transduction protein with CBS domains Paes_1044 1146709 - 1147935 + | amidohydrolase TERM 1309 1148098 - 1148144 + T 73 -8.9 -3.4642 | opp_overlap 1148110, overlap 1148100 1148102 1148110 GATTGGTGATTGGTG GAGACAGAAAAAGCCGGCA ACCTAAAAG TGCCGGCTTTTTTTGTGTG GTTTTGTTCCTTGCC TERM 1310 1148100 - 1148142 + T 83 -11.5 -3.29332 | opp_overlap 1148110, overlap 1148098 1148102 1148110 TTGGTGATTGGTGGA GACAGAAAAAGCCGGCA ACCTAAAAG TGCCGGCTTTTTTTGTG TGGTTTTGTTCCTTG TERM 1311 1148102 - 1148140 + T 95 -14.1 -3.19236 | opp_overlap 1148110, overlap 1148100 1148098 1148110 GGTGATTGGTGGAGA CAGAAAAAGCCGGCA ACCTAAAAG TGCCGGCTTTTTTTG TGTGGTTTTGTTCCT TERM 1312 1148132 - 1148110 - T 87 -7.7 -5.03994 | gap 1, opp_overlap 1148102 1148100 1148098 1148110 GTGGAGACAGAAAAA GCCGGCAACC TAAA AGT-GCCGGC TTTTTTTGTGTGGTT TERM 1313 1148110 - 1148132 + T 100 -7.7 -5.75478 | opp_overlap 1148110, overlap 1148102 1148100 1148098 GTGGAGACAGAAAAA GCCGGCA ACCTAAAAG TGCCGGC TTTTTTTGTGTGGTT Paes_1045 1149136 - 1148162 - | fructose-1,6-bisphosphate aldolase, class II TERM 1314 1149610 - 1149631 + G 72 -10.9 -3.00215 | overlap 1149604 1149615 ATCAGTTTCTTGTCG GCAAAGCCG ATGC TGGCTTTGC TATCTATAACCGTTT Paes_1046 1149282 - 1151363 + | carboxyl-terminal protease TERM 1315 1151399 - 1151364 - T 100 -13.4 -3.78034 | opp_overlap 1151364 1151366 1151374, overlap 1151365 1151368 1151374 CATTCACAGCAATAA TGCACAAAAAGGGGAG TAAG CTCCCCTTTTTGTGTG TTTCAGATCCGTGTT TERM 1316 1151364 - 1151399 + T 100 -17.8 -3.61922 | opp_overlap 1151364 1151365 1151368 1151374, overlap 1151366 1151374 CATTCACAGCAATAA TGCACAAAAAGGGGAG TAAG CTCCCCTTTTTGTGTG TTTCAGATCCGTGTT TERM 1317 1151398 - 1151365 - T 100 -16.9 -2.86338 | opp_overlap 1151364 1151366 1151374, overlap 1151364 1151368 1151374 ATTCACAGCAATAAT GCACAAAAAGGGGAG TAAG CTCCCCTTTTTGTGT GTTTCAGATCCGTGT TERM 1318 1151366 - 1151397 + T 100 -20.4 -3.38522 | opp_overlap 1151365 1151364 1151368 1151374, overlap 1151364 1151374 TTCACAGCAATAATG CACAAAAAGGGGAG TAAG CTCCCCTTTTTGTG TGTTTCAGATCCGTG TERM 1319 1151395 - 1151368 - T 100 -17.2 -2.68142 | opp_overlap 1151366 1151364 1151374, overlap 1151365 1151364 1151374 CACAGCAATAATGCA CAAAAAGGGGAG TAAG CTCCCCTTTTTG TGTGTTTCAGATCCG TERM 1320 1151374 - 1151389 + T 93 -10.4 -5.14985 | opp_overlap 1151368 1151365 1151364 1151374, overlap 1151366 1151364 AATAATGCACAAAAA GGGGAG TAAG CTCCCC TTTTTGTGTGTTTCA TERM 1321 1151389 - 1151374 - T 93 -10.4 -4.94222 | opp_overlap 1151374 1151366 1151364, overlap 1151368 1151365 1151364 AATAATGCACAAAAA GGGGAG TAAG CTCCCC TTTTTGTGTGTTTCA Paes_1047 1152784 - 1151402 - | argininosuccinate lyase TERM 1322 1152727 - 1152716 - G 72 -5.8 -4.3129 | CACGGAGGAGGAAAA GAGG AGAG CCTC ACGATCAAACGGCTC TERM 1323 1152761 - 1152749 - G 70 -6.9 -4.0896 | AAACGGCTCTGAAAA GCGGC TTT GCCAC AAGAGTTCTTTTTTC TERM 1324 1152932 - 1152907 - H 71 -7.7 -3.81755 | overlap 1152913 ATTCCGGAAATATAA GAAAAAGGC GGCGGTAA GCCTTTTTC GCCAGCCACTTTCAG TERM 1325 1152939 - 1152913 - H 79 -2.9 -5.33331 | gap 1, overlap 1152907 GAAATATAAGAAAAA GGC-GGCGGTAA GCCT TTTTCGCCAGCC ACTTTCAGTGCTTTC TERM 1326 1153990 - 1154002 + G 85 -3.3 -5.32944 | GGCCGAAGATGTTGC CAGAG CTG CGCTG TTTTTTGCTTCTGAC Paes_1048 1153328 - 1154074 + | short-chain dehydrogenase/reductase SDR Paes_1049 1154267 - 1155769 + | sulphate transporter Paes_1050 1155781 - 1156635 + | UspA domain protein Paes_1051 1157244 - 1156675 - | Exonuclease RNase T and DNA polymerase III TERM 1327 1157394 - 1157411 + H 74 -5.5 -4.70626 | GGTCCGGGTTCCTTG TCGGCGG ATTT CTGTCGA TTTTTGCGGTTATTA TERM 1328 1158040 - 1158028 - g 100 -3.3 -6.23545 | opp_overlap 1158031, overlap 1158031 TTGAAAGAAAAAAAA GAGGG GCA CCGTC CTCTGATTGATCCGG Paes_1052 1157515 - 1159215 + | AMP-dependent synthetase and ligase TERM 1329 1160178 - 1160199 + F 73 -3 -5.08824 | gap 1, overlap 1160181 1160196 ATGTCTTTGGGTGCG CAGGGGGCT CGGAA AGCCT-CTG TTTTTTCGCTGAAAA TERM 1330 1160229 - 1160217 - f 72 -3.3 -5.00616 | opp_overlap 1160196, overlap 1160218 TTTTCGCTGAAAAAA GCAGG TGT CCTGG AAAATGACGGCGGCA Paes_1055 1160757 - 1160915 + | hypothetical protein TERM 1331 1162102 - 1162125 + G 81 -13.2 -2.55074 | opp_overlap 1162081, overlap 1162100 TCAGGGCAAGTCTCG CGCCGACGAT GCGT ATCGTTGGCG TCCATTCCAGTTGGC TERM 1332 1163107 - 1163138 + G 72 -10.9 -3.02511 | gap 1, opp_overlap 1163111, overlap 1163115 GATGCTGAACCGTCA GCAATGCCTGGCGC CGCTA GCGGC-GGCATTGC TGTTGGCCCCGTACG Paes_1056 1160915 - 1164106 + | helicase domain protein Paes_1057 1164110 - 1165933 + | hypothetical protein Paes_1058 1165936 - 1167126 + | hypothetical protein Paes_1059 1167123 - 1168763 + | hypothetical protein TERM 1333 1169314 - 1169277 - g 75 -5.6 -4.59511 | opp_overlap 1169293, overlap 1169278 1169303 1169307 AAGATTCTCGAAAAA CTGCCGGAACCCCTTC TCAGCT GAAAGAATTGCGGCAA TACTTGCGGCCTGAT TERM 1334 1169577 - 1169559 - g 74 -7.4 -4.07885 | CACCTTGGCTCAAAA GCTTTCTG GAA CGGAAAGC CGTGCCCGGGCTGAC Paes_1060 1168760 - 1170343 + | NERD domain protein TERM 1335 1170393 - 1170412 + F 79 -11.4 -3.01712 | opp_overlap 1170391 TGACGTCAGGGAACG GCGGTGCA GCAA TGCGCCGC TGTTACCCGACAAGC Paes_1061 1170507 - 1170947 + | hypothetical protein Paes_1063 1172211 - 1173659 + | protein of unknown function DUF404 Paes_1064 1173685 - 1174749 + | protein of unknown function DUF403 TERM 1336 1174918 - 1174939 + G 95 -6.7 -5.32944 | gap 1, overlap 1174921 CGTGAATTTCAATCT TGA-GCTTCA GCC TGAAGCTTCA TTTTTTGATTATACC TERM 1337 1174921 - 1174935 + G 74 -8.6 -3.98857 | overlap 1174918 GAATTTCAATCTTGA GCTTCA GCC TGAAGC TTCATTTTTTGATTA Paes_1065 1174793 - 1175614 + | transglutaminase domain protein Paes_1066 1175956 - 1176129 + | hypothetical protein Paes_1068 1177806 - 1176763 - | 6-phosphofructokinase Paes_1069 1178583 - 1178296 - | hypothetical protein TERM 1338 1178462 - 1178492 + g 73 -3.8 -4.8622 | overlap 1178452 GTGAGCCGGTAGTAC CCGTTTGCCCTGCC GGA GTCAGGGTTGAGGG TTTTTCCTTCCGCCC Paes_1070 1179687 - 1178653 - | Fructose-bisphosphate aldolase TERM 1339 1179632 - 1179642 + g 72 -6.8 -4.25283 | ACGCCTTTCCCTGGC GCCA CGA TGGC TTTTGCTACAGAACT TERM 1340 1180051 - 1180020 - R 83 -12.3 -3.03635 | gap 1, overlap 1180023 GAAACGTGGTCAATA CG-ATTCCCCCGGC ATTGG GCCGGGGGAAAGCG TAAGCGGAAATCATC TERM 1341 1180047 - 1180023 - R 100 -17.2 -2.73994 | overlap 1180020 ACGTGGTCAATACGA TTCCCCCGGC ATTGG GCCGGGGGAA AGCGTAAGCGGAAAT Paes_1071 1181270 - 1180065 - | Argininosuccinate synthase TERM 1342 1181130 - 1181144 + g 75 -5.7 -4.72272 | GATAGCTTTTTCTTC GAGGT TTTCC ACCTC TTTTTCCTGGCCGAG Paes_1072 1181734 - 1181288 - | arginine repressor, ArgR TERM 1343 1181440 - 1181454 + g 70 -6.4 -4.26076 | ACGCTACGCCATGGG CTCTTC CCG GAAGGG TTTTAATGACGATAG Paes_1073 1182773 - 1181739 - | ornithine carbamoyltransferase Paes_1074 1183690 - 1182782 - | acetylglutamate kinase Paes_1075 1185010 - 1183712 - | arginine biosynthesis bifunctional protein ArgJ Paes_1076 1186036 - 1185020 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1344 1185053 - 1185065 + g 74 -6.3 -4.48072 | opp_overlap 1185052, overlap 1185042 TTCATCATAGCCAAG CATGA TAT TCATG TTTTGTACTGCCTGT TERM 1345 1185469 - 1185480 + g 70 -3.6 -4.59773 | CTGAAAATGAGAGTT CCGT TTTG GCGG TTTTTCCCGCTCCCG TERM 1346 1185878 - 1185897 + g 100 -6.4 -5.47821 | opp_overlap 1185878 CATGTCGACAGCAAG CCACGGAT AGAG GTCTGTGG TTTTTTTGCCTGCCT TERM 1347 1186172 - 1186205 + H 79 -9.1 -3.87815 | overlap 1186173 TATTTATGCAAGCCT GTGATAGTTATTCAT TTTT ATGAATAACTATCGG TTTCTCGGGCTAAGC TERM 1348 1186173 - 1186204 + H 82 -12.6 -2.92475 | overlap 1186172 ATTTATGCAAGCCTG TGATAGTTATTCAT TTTT ATGAATAACTATCG GTTTCTCGGGCTAAG TERM 1349 1186485 - 1186500 + G 78 -9 -3.91352 | TCAGTGGAACGCTTA CTGTCG CTGC CGACAG TTTACTTGCGCCTGT Paes_1077 1186346 - 1187260 + | phosphate-binding protein, putative TERM 1350 1188422 - 1188450 + G 77 -11.7 -3.27029 | overlap 1188420 TTAGCGCTGGGATCG CCACCTTTCCGCA TGA TGCGCAGGGGTGG TATTCGTTGATCAAC Paes_1078 1187260 - 1188558 + | diguanylate cyclase TERM 1351 1188756 - 1188773 + G 72 -6.3 -4.40358 | gap 1, overlap 1188760 CATATGCAGGTTCGC CAGTCCGA CGG TCGG-CTG TTTTATCCGCTCGAT Paes_1079 1188555 - 1189814 + | protein of unknown function DUF214 Paes_1080 1189811 - 1191124 + | protein of unknown function DUF214 TERM 1352 1191216 - 1191181 - T 87 -8.3 -4.56597 | gap 1, opp_overlap 1191181 TGTTGCGCTGAAAAA GCGGAGC-TCCTGCAT TGCTG ATGCACGTTGCTCCGC TTTTTTTCAGGGAAT TERM 1353 1191181 - 1191216 + T 100 -9 -5.40474 | gap 1, opp_overlap 1191181 TGTTGCGCTGAAAAA GCGGAGC-TCCTGCATT GCT GATGCACGTTGCTCCGC TTTTTTTCAGGGAAT Paes_1081 1191413 - 1191249 - | Rubredoxin-type Fe(Cys)4 protein Paes_1082 1191999 - 1191538 - | GCN5-related N-acetyltransferase TERM 1354 1192122 - 1192109 - g 74 -2.5 -5.03314 | CTTATGTTCAAAAAA TTTTT CCGG AAAAA AATATCACGCCCGGC Paes_1083 1192058 - 1192582 + | Lipocalin family protein TERM 1355 1192750 - 1192769 + G 70 -7.1 -4.11216 | GATTTTTATAGCGGA GCTGGGG GATAAA TCCCAGC TTTTAGCGCTCAGCC TERM 1356 1193218 - 1193182 - g 82 -7.9 -4.57341 | opp_overlap 1193181 1193182 1193184, overlap 1193184 AATCCTCGGTAAAAA CCTTCCGGAGCAGAC GGTTAAA GTCGGCGCCGGAATG ATCTTTTTTGTGTTC Paes_1084 1192706 - 1193353 + | protein of unknown function UPF0016 Paes_1085 1195922 - 1193379 - | hypothetical protein TERM 1357 1194159 - 1194200 + g 70 -5.9 -4.2131 | gap 1, overlap 1194158 GTCATTCCAGTCCGG CGCA-TCGTCTGCTGCGT GGAGGGG AAGCAGAAGGCGAGTGCG TGTTTTTTCCTGAAT TERM 1358 1194674 - 1194702 + g 70 -3.8 -4.7078 | opp_overlap 1194665 1194668 CATAATCGACGGCAT CGCCATTGCC GCCTGCCTG GGAGATGGCG TTTTTCAATCCTTCA TERM 1359 1195198 - 1195216 + g 71 -11 -2.87132 | opp_overlap 1195198 1195195 1195194 TCAGGAAAGAATGTA TCGGTGTC GAA GACGCCGA TCTGTCGAAGAGGAG TERM 1360 1195332 - 1195301 - G 78 -8.6 -4.26681 | opp_overlap 1195300 1195325, overlap 1195302 AGAAATGATCGAAAA TCGCAGCAAGAAGG ATAG CCTCCCGGCTGCGG ATTCGGTCAGCCTTG TERM 1361 1195331 - 1195302 - G 81 -12.1 -3.14924 | opp_overlap 1195300 1195325, overlap 1195301 GAAATGATCGAAAAT CGCAGCAAGAAGG ATAG CCTCCCGGCTGCG GATTCGGTCAGCCTT TERM 1362 1196273 - 1196296 + G 73 -3.9 -4.86731 | gap 1, overlap 1196276 1196277 GCCTGATCTGTCGGT TGCAGCCCTT CTCGA AAGGGC-GTA TTTTGTTTAAAGGAG Paes_1086 1196110 - 1196778 + | ABC transporter related TERM 1363 1197141 - 1197157 + G 74 -6.5 -4.44974 | overlap 1197143 ATCGGAGTCGATCCC TGGTGGG AGC CCCGCTA TTTTCTGCCATTTGG Paes_1087 1196775 - 1197566 + | hypothetical protein Paes_1088 1198388 - 1197543 - | prolipoprotein diacylglyceryl transferase Paes_1089 1198539 - 1199738 + | ATP-grasp domain protein TERM 1364 1200167 - 1200147 - g 70 -4.7 -4.56597 | GGCGTGCCTGAAAAA GATGCCAAA AAA CTTCGCATC GTCGCAGAGAAAAAA Paes_1090 1199796 - 1201628 + | ATP-citrate lyase/succinyl-CoA ligase TERM 1365 1201654 - 1201699 + F 100 -23.7 -3.65529 | opp_overlap 1201657 1201662, overlap 1201657 1201662 TACAAAGCGTTATAG TAATAAAAGGCCCTGTGAAAC GTGA GTTTCACAGGGCCTTTTATCA TTTCGGTCACAATAT TERM 1366 1201657 - 1201696 + F 100 -25.4 -2.94144 | opp_overlap 1201657 1201662, overlap 1201654 1201662 AAAGCGTTATAGTAA TAAAAGGCCCTGTGAAAC GTGA GTTTCACAGGGCCTTTTA TCATTTCGGTCACAA TERM 1367 1201696 - 1201657 - f 100 -25.4 -3.27215 | opp_overlap 1201654 1201657 1201662, overlap 1201662 AAAGCGTTATAGTAA TAAAAGGCCCTGTGAAAC GTGA GTTTCACAGGGCCTTTTA TCATTTCGGTCACAA TERM 1368 1201662 - 1201691 + F 100 -20.9 -4.62168 | opp_overlap 1201662 1201657, overlap 1201657 1201654 GTTATAGTAATAAAA GGCCCTGTGAAAC GTGA GTTTCACAGGGCC TTTTATCATTTCGGT TERM 1369 1201691 - 1201662 - f 100 -20.9 -4.75472 | opp_overlap 1201657 1201654 1201662, overlap 1201657 GTTATAGTAATAAAA GGCCCTGTGAAAC GTGA GTTTCACAGGGCC TTTTATCATTTCGGT Paes_1091 1201824 - 1203266 + | hypothetical protein TERM 1370 1203564 - 1203584 + F 93 -9.7 -4.90013 | opp_overlap 1203563, overlap 1203572 GTTGAGACACATGAG CAGGGGC CCGCAAA GCCCCTG TTTTTCGTTGAATTG Paes_1093 1203664 - 1204254 + | Resolvase domain TERM 1371 1204384 - 1204407 + F 74 -3.8 -5.00616 | overlap 1204385 ATCGAGCTTTAGGGA TGATGCTTGC TGTC GCGGGTATCG TTTTTTCGGGAAAAA TERM 1372 1204639 - 1204653 + F 100 -11.4 -4.89562 | AGCAGATACATATTG CGCCTG GAC CAGGCG TTTTGTTCATTTTCA TERM 1373 1204963 - 1204930 - f 78 -10.3 -3.63068 | gap 1, overlap 1204933 GCAGATCAGTCTAAA CATTGTTCACCCGCCC TGC GGTCGGGTGAACG-TG GCCGCGGATCGGGCA TERM 1374 1204961 - 1204933 - f 84 -13.1 -2.63089 | overlap 1204930 GATCAGTCTAAACAT TGTTCACCCGCCC TGC GGTCGGGTGAACG TGGCCGCGGATCGGG TERM 1375 1205059 - 1205026 - f 82 -12.5 -2.94099 | CGGCTGGAGCAGACA CTCCGCACCGAAAAA TAAA TTTTCCGCCGCGGAG CACTGCTCATCCGCG Paes_1095 1205116 - 1205634 + | hypothetical protein Paes_1096 1205636 - 1206109 + | hypothetical protein TERM 1376 1206290 - 1206274 - g 86 -12.3 -3.54543 | opp_overlap 1206258, overlap 1206277 AGCGATTGGGCTAAA CAAGCCC GAG GGGCTTG CCCTGCTCCCTCGCA TERM 1377 1206287 - 1206277 - g 74 -8.2 -3.9122 | opp_overlap 1206258, overlap 1206274 GATTGGGCTAAACAA GCCC GAG GGGC TTGCCCTGCTCCCTC Paes_1097 1206212 - 1206718 + | hypothetical protein TERM 1378 1207277 - 1207251 - g 74 -10.8 -3.15544 | opp_overlap 1207247 1207271 GCTGACCTTCAGGAA GTCTCCGTGGTC TCT GACCCCGCAGAC AAGCATTGTCGTGCG TERM 1379 1207425 - 1207368 - g 100 -23.6 -3.65201 | gap 2, opp_overlap 1207383, overlap 1207359 1207369 CAAGACGCCGAACAA TCGCCTCCAGCATACCCCGGAGGGCGCA CGGA CGCGCCCTCC-GGGTCTGCTG-AGGCGT GACGTTCACCCGCCC TERM 1380 1207424 - 1207369 - g 100 -27.1 -2.78639 | gap 2, opp_overlap 1207383, overlap 1207359 1207368 AAGACGCCGAACAAT CGCCTCCAGCATACCCCGGAGGGCGCA CGGA CGCGCCCTCC-GGGTCTGCTG-AGGCG TGACGTTCACCCGCC TERM 1381 1207383 - 1207412 + G 100 -22.2 -2.78816 | opp_overlap 1207369 1207368 TCGCCTCCAGCATAC CCCGGAGGGCGC ACGGAC GCGCCCTCCGGG TCTGCTGAGGCGTGA Paes_1098 1206702 - 1207427 + | hypothetical protein TERM 1382 1207554 - 1207521 - f 82 -12.5 -2.95298 | overlap 1207505 CGGATGGAGCAGACA CTCCGCACCGAAAAA TAAA TTTTCCGCCGCGGAG CACTGCTCATCCGCG Paes_1099 1207678 - 1208163 + | transposase IS3/IS911 family protein Paes_1100 1208193 - 1208972 + | conserved hypothetical transposase Paes_1101 1209022 - 1209216 + | hypothetical protein TERM 1383 1209595 - 1209622 + G 74 -10.6 -3.18912 | opp_overlap 1209577 1209591 1209590 AACACAGGAAGGTCG CCACTGCAAAGT AAAA GCATTGCAGTGG TTACTGACTCACTCG TERM 1384 1209698 - 1209679 - g 76 -7.8 -4.1899 | opp_overlap 1209691, overlap 1209691 GCATGTGACGGAAAA CCGGGG AAAACACA CCCCGG GAGTTGATAACCAAA Paes_1102 1209470 - 1210957 + | RNA-directed DNA polymerase Paes_1103 1211052 - 1211333 + | integrase, catalytic region Paes_1104 1211478 - 1212068 + | Resolvase domain TERM 1385 1212469 - 1212456 - g 80 -5.3 -4.95155 | opp_overlap 1212456 CCCACAGGAGAAAAA GGAAT ACTC ATTCC TGTTCGCATCGAGCC TERM 1386 1213713 - 1213703 - g 70 -6.8 -4.08706 | GGCTCACTACAGAAA GGAG ATG CTCC AGTCCCTTCTGGCCC Paes_1105 1212183 - 1214918 + | TPR repeat-containing protein TERM 1387 1215068 - 1215022 - T 100 -23.6 -4.27117 | opp_overlap 1215022 GTTGTATAATATAAA TTATGTAAAGTAAGGTATGTTC TGT AAACATACCTTACTTTACATAA TTTGGGTTATAGGAC TERM 1388 1215022 - 1215068 + T 100 -22.9 -3.80625 | opp_overlap 1215022 GTTGTATAATATAAA TTATGTAAAGTAAGGTATGTT CTGTA AACATACCTTACTTTACATAA TTTGGGTTATAGGAC TERM 1389 1215119 - 1215131 + T 100 -4.1 -5.61596 | TCTTTGTTACTATGG CGTCA GCC TGATG TTTTTTTGTAGCGGT Paes_1106 1216260 - 1215121 - | ABC-2 type transporter Paes_1107 1217386 - 1216280 - | ABC-2 type transporter TERM 1390 1216508 - 1216487 - G 80 -5.1 -4.88293 | gap 1 AACGGGAAAAATAAA GCCTGACAGC ATC ACCGTC-GGC AGGAGCAATCCCCCG Paes_1108 1218150 - 1217383 - | ABC transporter related Paes_1109 1219075 - 1218137 - | ABC transporter related Paes_1110 1220002 - 1219088 - | putative ABC transport system, lipoprotein Paes_1111 1221297 - 1220263 - | cell shape determining protein MreB/Mrl Paes_1112 1222134 - 1221571 - | hypothetical protein TERM 1391 1222095 - 1222114 + g 71 -2.8 -4.8083 | overlap 1222083 TTATTGCTGTGGAGC GATCTGTG GCTG TACTGATC TTTTTGGTAATCTTC Paes_1113 1222751 - 1222188 - | cell wall hydrolase SleB TERM 1392 1222336 - 1222346 + g 79 -4.6 -5.00616 | opp_overlap 1222325 1222323, overlap 1222325 1222327 AGCACCGCAGCTGCT GCCG CTT TGGC TTTTTTCCAGGCCCG Paes_1114 1223106 - 1223567 + | hypothetical protein TERM 1393 1223609 - 1223651 + F 91 -7 -5.4477 | opp_overlap 1223613 AATCCTTTTTTCACA CGAAGCGTTCTTTTTCTCTC CCA GAGAGCACTAAAACGCTTTG TTTTTTTGAAAGTTT TERM 1394 1223686 - 1223663 - f 71 -8.3 -3.53012 | TTTGTTTTTTTGAAA GTTTATCGT TTATTT ACGATAAAC AAGAGACAGATACAT Paes_1115 1223700 - 1224041 + | transcriptional regulator, ArsR family Paes_1116 1224092 - 1224325 + | redox-active disulfide protein 2 Paes_1117 1224342 - 1225400 + | permease Paes_1118 1225434 - 1225868 + | protein tyrosine phosphatase TERM 1395 1226464 - 1226481 + G 71 -3.4 -4.81685 | gap 1, overlap 1226467 GGCATTCCTTTTATC GCAGGGT TTCTC ACCC-GC TTTTTCCTGATTCGT Paes_1119 1225870 - 1226916 + | arsenical-resistance protein TERM 1396 1227123 - 1227146 + F 70 -7.4 -3.88291 | gap 1 AGCCATAAAAACAGG GGGGGCTG-GC AAT GCGCAGCTCTC TTTCTGAGGCTGATG TERM 1397 1227706 - 1227730 + G 72 -8 -3.86897 | gap 1, opp_overlap 1227705 1227702 CTTCGCAGACAGGAT GCAG-ACAGAA AATT TTCTGTACTGC TTTCTGACACATGCG Paes_1120 1227448 - 1227912 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1398 1227987 - 1228044 + F 81 -11.5 -3.19117 | opp_overlap 1228001, overlap 1227988 1228001 CGTAACAGACAGCTT CTTTACAGCAAAAACGCATGAAAAAAG CCAT CACTTTTCATGCGTTTTTGCTGTTCAC TCTTAATGCTGTCCT TERM 1399 1227988 - 1228043 + F 89 -15 -2.50988 | opp_overlap 1228001, overlap 1227987 1228001 GTAACAGACAGCTTC TTTACAGCAAAAACGCATGAAAAAAG CCAT CACTTTTCATGCGTTTTTGCTGTTCA CTCTTAATGCTGTCC TERM 1400 1228030 - 1228001 - f 91 -10.1 -4.8048 | opp_overlap 1227988 1227987 1228001 TCTTTACAGCAAAAA CGCATGAAAAAAG CCAT CACTTTTCATGCG TTTTTGCTGTTCACT TERM 1401 1228001 - 1228030 + F 86 -7.9 -4.88228 | opp_overlap 1228001, overlap 1227988 1227987 TCTTTACAGCAAAAA CGCATGAAAAAAG CCAT CACTTTTCATGCG TTTTTGCTGTTCACT Paes_1121 1228004 - 1228186 + | hypothetical protein TERM 1402 1228487 - 1228515 + T 95 -12.6 -3.70689 | gap 1, opp_overlap 1228476 1228484 1228493, overlap 1228477 AAAATCGCATAAGGC GAGGAA-TGGGTC TTTC GACCCACTTCCTC TTGTATGTGTGTTTC TERM 1403 1228508 - 1228493 - T 70 -9 -3.19653 | opp_overlap 1228487 1228477, overlap 1228484 GCATAAGGCGAGGAA TGGGTC TTTC GACCCA CTTCCTCTTGTATGT Paes_1122 1229397 - 1228555 - | hypothetical protein TERM 1404 1229243 - 1229217 - G 74 -2.1 -5.10154 | opp_overlap 1229220, overlap 1229203 1229219 1229220 AGGCAAAACCAAAAA CAGCGTGCTGG TTTTC CCAGCCCGTTT TCGTGAGCCCGAGCA TERM 1405 1229220 - 1229240 + g 78 -8.2 -4.25104 | opp_overlap 1229203 1229219 1229217 1229220 CAAAACCAAAAACAG CGTGCTGG TTTTC CCAGCCCG TTTTCGTGAGCCCGA Paes_1123 1229827 - 1229408 - | cytochrome c class I TERM 1406 1229970 - 1229955 - R 75 -4.7 -4.91109 | opp_overlap 1229955 CCCTCATTATAAAAA CAGGT TATAGT ACCTG TTCGTCGTCAGGATC TERM 1407 1230107 - 1230120 + r 100 -2.3 -6.02914 | TTTTTTCGTTCTATG CTCGT TGCA ACGTG TTTTTTTTCTATCCG TERM 1408 1230618 - 1230638 + r 70 -8.9 -3.20348 | overlap 1230634 ACGACAAGGTGGTTC GCGGTTGCA GCA TGCTGCCGC TTCGGTCTTCGTGCG TERM 1409 1230802 - 1230759 - R 100 -19.8 -4.51196 | opp_overlap 1230761 1230763 1230766, overlap 1230761 CGGAAATGGAGAAAA TACAGAACGCACCGGAAG CTGTCCTC CTTCCGGTGCGTTCTGTC TGATGTAGAGGGGAC TERM 1410 1230761 - 1230800 + r 100 -22.4 -2.85351 | opp_overlap 1230759 1230761, overlap 1230763 1230766 GAAATGGAGAAAATA CAGAACGCACCGGAAG CTGTCCTC CTTCCGGTGCGTTCTG TCTGATGTAGAGGGG TERM 1411 1230800 - 1230761 - R 100 -22.4 -3.85911 | opp_overlap 1230761 1230763 1230766, overlap 1230759 GAAATGGAGAAAATA CAGAACGCACCGGAAG CTGTCCTC CTTCCGGTGCGTTCTG TCTGATGTAGAGGGG TERM 1412 1230763 - 1230798 + r 100 -19.2 -2.97747 | opp_overlap 1230761 1230759, overlap 1230761 1230766 AATGGAGAAAATACA GAACGCACCGGAAG CTGTCCTC CTTCCGGTGCGTTC TGTCTGATGTAGAGG TERM 1413 1230766 - 1230795 + r 100 -15.1 -3.6336 | opp_overlap 1230761 1230759, overlap 1230763 1230761 GGAGAAAATACAGAA CGCACCGGAAG CTGTCCTC CTTCCGGTGCG TTCTGTCTGATGTAG Paes_1125 1232451 - 1230823 - | hybrid cluster protein Paes_1126 1232868 - 1232464 - | TPR repeat-containing protein TERM 1414 1232541 - 1232561 + g 76 -11.1 -3.29263 | overlap 1232529 TTCTCTTATTGAGTT CCGCTCTTC TGA GATGAGCGG TTCTCAGCAAGCTCT Paes_1127 1233755 - 1232862 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Paes_1128 1234239 - 1233730 - | transcriptional regulator, BadM/Rrf2 family TERM 1415 1234392 - 1234402 + r 79 -4 -5.24531 | ACGATGCAGATCATT GTTT TTG AAAC TTTTTTCTGCGCCAT Paes_1132 1236634 - 1236347 - | hypothetical protein Paes_1133 1238061 - 1236700 - | Radical SAM domain protein Paes_1134 1238747 - 1238265 - | hypothetical protein TERM 1416 1238498 - 1238526 + g 72 -8.2 -3.83724 | opp_overlap 1238500 1238504, overlap 1238500 CTGATGTTGTCCCAT AACCAATCCGAT ATCGA GTCGGATTGGTG TTTCCATTATATGAT TERM 1417 1238500 - 1238524 + g 78 -10.8 -3.49837 | opp_overlap 1238500 1238504, overlap 1238498 GATGTTGTCCCATAA CCAATCCGAT ATCGA GTCGGATTGG TGTTTCCATTATATG TERM 1418 1238524 - 1238500 - G 72 -10.1 -3.28924 | opp_overlap 1238498 1238500, overlap 1238504 GATGTTGTCCCATAA CCAATCCGA TATCGAG TCGGATTGG TGTTTCCATTATATG Paes_1135 1239130 - 1238798 - | hypothetical protein Paes_1136 1241178 - 1239835 - | amino acid permease-associated region Paes_1137 1242146 - 1241316 - | MscS Mechanosensitive ion channel Paes_1138 1243397 - 1242159 - | hypothetical protein TERM 1419 1243108 - 1243120 + g 74 -3.3 -5.00884 | opp_overlap 1243109, overlap 1243109 CCTCCAGAGGCAAAA AGCTC AGT GAGCA TTTTTTCCAGAACAT TERM 1420 1243119 - 1243109 - G 81 -6.8 -4.70659 | opp_overlap 1243109 1243108 CTCCAGAGGCAAAAA GCTC AGT GAGC ATTTTTTCCAGAACA Paes_1139 1244297 - 1243413 - | MscS Mechanosensitive ion channel Paes_1140 1244458 - 1244273 - | hypothetical protein TERM 1421 1245019 - 1245000 - R 100 -12.2 -5.70522 | opp_overlap 1245000 AAGAACAACAAAAAA GCCTCAAC GAAA GTTGAGGC TTTTGATAGAATGCT TERM 1422 1245000 - 1245019 + r 95 -12.2 -4.2717 | opp_overlap 1245000 AAGAACAACAAAAAA GCCTCAAC GAAA GTTGAGGC TTTTGATAGAATGCT Paes_1141 1245210 - 1245052 - | hypothetical protein Paes_1142 1245536 - 1245207 - | transcriptional regulator, ArsR family TERM 1423 1245610 - 1245598 - R 72 -7.7 -3.96876 | overlap 1245596 CATAAAATCAAAATA GTGGT GCG ACCAC GTAATGCAATATTCA Paes_1143 1247714 - 1245753 - | ABC transporter related Paes_1144 1248686 - 1247721 - | efflux transporter, RND family, MFP subunit TERM 1424 1247862 - 1247877 + g 72 -10.4 -3.28712 | CTCCTCATCCTGAAG GCCGGT CGTC ACCGGC TTATAAGAGGCCGGG Paes_1145 1249998 - 1248679 - | outer membrane efflux protein TERM 1425 1249069 - 1249058 - G 73 -3.6 -4.73448 | overlap 1249050 ATAGAGACCGAAAAA CCGG CATT CCAG TCAAGTGCGTCGACC Paes_1146 1250595 - 1250071 - | hypothetical protein TERM 1426 1250523 - 1250505 - G 78 -8.8 -4.1899 | opp_overlap 1250509 1250517 TCATTGCAGGCAAAA GCAGCACG AGA CTTGCTGC GGCAATTCGTGTTTT Paes_1147 1251064 - 1250582 - | putative transmembrane anti-sigma factor Paes_1148 1251608 - 1251054 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1427 1251816 - 1251788 - g 77 -7.3 -4.45151 | opp_overlap 1251795, overlap 1251782 AAGATTCAACGAAAA CCCGATTGGCTGA AAC TCAGGCTTTCGGG AACGGCTCAATTTGC Paes_1149 1251770 - 1252648 + | lipoic acid synthetase TERM 1428 1253135 - 1253145 + G 79 -4.6 -4.91109 | TGATTGCCGGCAGTT GGGC ATT GTCC TTTTTCTGGTACCGC Paes_1150 1252663 - 1253241 + | hypothetical protein TERM 1429 1253881 - 1253848 - g 88 -8.8 -4.70879 | opp_overlap 1253847 TTGAAACCGGAAAAA TCAACCGCAGCGAC GTAGCG GAAGCTGCGGTCGA GTCCCTTTGGACTCC Paes_1151 1253289 - 1253993 + | NAD-dependent epimerase/dehydratase Paes_1152 1254010 - 1254825 + | zinc/iron permease Paes_1153 1255633 - 1254794 - | short-chain dehydrogenase/reductase SDR TERM 1430 1255038 - 1255014 - G 71 -10.7 -2.9155 | opp_overlap 1255013, overlap 1255009 TCCCGCAACAGCAGA TCAGTCAGGAC AAG GCCCGGACTGA CTTCATGGACCCCGA TERM 1431 1255946 - 1255924 - R 100 -9.9 -6.11019 | gap 1 AAAAAGCAAAAAAAA GCGACAGCGC TTCA GC-CTGTCGC AAAGAACAACGAAAA Paes_1154 1257044 - 1255974 - | ferredoxin Paes_1155 1257267 - 1257668 + | hypothetical protein TERM 1432 1257684 - 1257651 - T 100 -14.1 -3.3705 | gap 1, overlap 1257643 AAATATAGGCGACAA TGC-GACCTTGCAGTA TAA TACTGCAAGGTCTACA TGCAAACTCAGGACA Paes_1156 1258308 - 1257703 - | yecA family protein TERM 1433 1257892 - 1257882 - G 72 -4.6 -4.60487 | CATCATCGTCAAAAA GCGG CTT CCAC TCCTCGCGAGTCAGC TERM 1434 1258481 - 1258446 - R 100 -17.9 -4.8269 | opp_overlap 1258451, overlap 1258451 GAGAATCAGGAAAAA CAAAACAGTTCCTGA TAGGGG TCAGGAACTGTTTTG GCGATCACGGATAGA TERM 1435 1258476 - 1258451 - R 100 -12 -5.3104 | opp_overlap 1258451, overlap 1258446 TCAGGAAAAACAAAA CAGTTCCTGA TAGGGG TCAGGAACTG TTTTGGCGATCACGG TERM 1436 1258451 - 1258476 + r 100 -12.7 -4.11216 | opp_overlap 1258451 1258446 TCAGGAAAAACAAAA CAGTTCCTGAT AGGG GTCAGGAACTG TTTTGGCGATCACGG Paes_1157 1259298 - 1258543 - | hypothetical protein TERM 1437 1258791 - 1258775 - G 79 -2.2 -5.24796 | overlap 1258751 TTCATATAATAAAAA CGCC CGTCATTTC GGCG ATATCCTGCAGGAAG TERM 1438 1259481 - 1259461 - R 71 -9.8 -3.08966 | GCAAATCGGACGTAA TTCCTGAC ATCAG GTCAGGAA AAAAACTGGCAGAAG Paes_1158 1263223 - 1259543 - | SMC domain protein TERM 1439 1261298 - 1261308 + g 72 -5.4 -4.46212 | TGCCTGTAGAAGCTT TTGC CCA GCAA TTTTGTCGTCAAGCG TERM 1440 1261445 - 1261413 - G 93 -12.7 -3.97674 | opp_overlap 1261439 1261442 GGATGATGCAAAGAA CCGCATAAAGGGCAG GGC CTGCCCTTGACGAGG CGACTTCTTTCATCT TERM 1441 1262243 - 1262278 + g 100 -18.5 -3.16564 | gap 1, overlap 1262234 1262248 CTTAGCCGATGCGTC GCA-CCGCTCTTCTGC AGGCG GCAGAAGAGCGGCTGC TTCGTCGCGTGCAGA TERM 1442 1263078 - 1263093 + g 78 -5.4 -4.77036 | opp_overlap 1263078 AGCGCTATGCAGACA GCATCA AGAA TGGTGC TTTTTCCTGCTCCGG Paes_1159 1264466 - 1263234 - | nuclease SbcCD, D subunit TERM 1443 1263364 - 1263350 - G 79 -3.5 -5.09426 | overlap 1263351 TGCAACGGGAAAAAA CCTCC TCTTC GGAGA GATCGTCAAGTTCCT Paes_1160 1267809 - 1264615 - | UvrD/REP helicase TERM 1444 1264661 - 1264647 - G 88 -11.4 -3.78775 | CGTTGCATGATGAAA GGCGCA CCA TGCGCC CTGCCGCGACAAAAT TERM 1445 1267709 - 1267726 + g 85 -9.9 -4.2558 | overlap 1267697 ATGGCATCGGGGCGA GCTTCTC CGCT GAGAAGC TTTTCATAGAGAATG Paes_1161 1270442 - 1267806 - | hypothetical protein TERM 1446 1269748 - 1269725 - G 71 -9.6 -3.44051 | overlap 1269747 CGTGCACGAGCAGAA CATCATCGGC CGAA GCCGATAACG TCGCTGTCGCGTAAT Paes_1162 1271111 - 1270494 - | TPR repeat-containing protein TERM 1447 1272247 - 1272263 + G 75 -5.1 -4.59773 | opp_overlap 1272244 TCTCAAAGAGCACCC TGAAGTC AAG GACATCA TTTTTACCGGTGGCG Paes_1163 1271708 - 1273009 + | radical SAM domain protein TERM 1448 1273047 - 1273072 + F 100 -9.1 -6.11243 | opp_overlap 1273047 AAAACAACAAAAAAA CCTGCAACAAA AAAA TTTATTGCAGG TTTTTTTTGTTAAAT TERM 1449 1273072 - 1273047 - f 100 -11.3 -6.04419 | opp_overlap 1273047 AAAACAACAAAAAAA CCTGCAACAAA AAAA TTTATTGCAGG TTTTTTTTGTTAAAT TERM 1450 1274163 - 1274147 - g 81 -9.3 -4.14392 | opp_overlap 1274142 1274140, overlap 1274148 CCTGAATCCCGAAAA TGCCGGC TAT GCCGGCC ACATTCTGTTCCATT TERM 1451 1274162 - 1274148 - g 79 -12.8 -3.08314 | opp_overlap 1274142 1274140, overlap 1274147 CTGAATCCCGAAAAT GCCGGC TAT GCCGGC CACATTCTGTTCCAT Paes_1164 1273278 - 1274216 + | 8-oxoguanine DNA glycosylase domain protein Paes_1165 1274641 - 1274300 - | hypothetical protein TERM 1452 1274934 - 1274878 - g 81 -13.2 -2.66373 | gap 2, opp_overlap 1274933, overlap 1274874 AACTTGAAGAACTGA TGCAGAG-CATCGGTGAACCT-CGCTTC AGA GCGGCGCAGCTTCACCGATGGCTCTACA GCGACCGGGCCTCTG TERM 1453 1275087 - 1275073 - g 72 -10 -3.32844 | overlap 1275081 CTGCGGACTCGACAA CCAGGA AAT TCCTGG TACAACTGCATGACC Paes_1166 1274823 - 1275902 + | radical SAM enzyme, Cfr family Paes_1167 1275924 - 1276682 + | hypothetical protein Paes_1168 1276694 - 1277350 + | Nucleoside-triphosphate--adenylate kinase TERM 1454 1277406 - 1277374 - f 86 -12.9 -2.89421 | opp_overlap 1277379, overlap 1277379 GCAATAACGATTAGA GAAAAGTCAGTGCCT TTC AGACACTGACTTTTT TATTGTATCGCAGAA TERM 1455 1277379 - 1277401 + F 100 -10.6 -5.60689 | opp_overlap 1277379 1277374 AACGATTAGAGAAAA GTCAGTGCCT TTC AGACACTGAC TTTTTTATTGTATCG TERM 1456 1277401 - 1277379 - f 100 -12.8 -4.59027 | opp_overlap 1277379, overlap 1277374 AACGATTAGAGAAAA GTCAGTGCCT TTC AGACACTGAC TTTTTTATTGTATCG TERM 1457 1278246 - 1278279 + G 71 -9 -3.54935 | opp_overlap 1278246 1278236 1278247, overlap 1278247 AAAATCATTGAACAA CTTTCTTCAGCACA GCACCA TGTGCTGAAGGAAC TTTCCGACGCCTTTC TERM 1458 1278247 - 1278278 + G 77 -12.5 -2.7264 | opp_overlap 1278246 1278236 1278247, overlap 1278246 AAATCATTGAACAAC TTTCTTCAGCACA GCACCA TGTGCTGAAGGAA CTTTCCGACGCCTTT TERM 1459 1278678 - 1278642 - g 81 -10.2 -3.86015 | gap 1 GATGCTGCCTATAAA CAGGATCGCACGCCACG CTAT CATGGC-CGCGATACTG CCGTCATGCGCGCCA Paes_1169 1277424 - 1279859 + | primosomal protein N' TERM 1460 1280309 - 1280333 + G 81 -8.5 -4.35483 | overlap 1280281 GGCAGGTCTTGCAGT CAGAGCTAACG CTG CGTTCGCACTG TTTCTTGTACTGAAC Paes_1170 1279992 - 1280492 + | DoxX family protein Paes_1171 1281140 - 1280535 - | outer surface protein, putative Paes_1172 1281816 - 1281328 - | 3-dehydroquinate dehydratase, type II Paes_1173 1282538 - 1281816 - | protein of unknown function UPF0005 Paes_1174 1284017 - 1282554 - | heat shock protein HslVU, ATPase subunit HslU TERM 1461 1284071 - 1284054 - R 77 -9.9 -3.64703 | TTTTTTTGATTGAAA CAGAAGG ATTG CCTTCTG CTCAGACCTCTTCAA Paes_1175 1284621 - 1284073 - | 20S proteasome A and B subunits Paes_1176 1286199 - 1284730 - | RNA polymerase, sigma 54 subunit, RpoN TERM 1462 1286157 - 1286145 - G 72 -7.7 -3.9392 | overlap 1286130 GCTGACTCGAAAGAA TCTGC TGT GCAGA AAGCTGGGCCCTCTG Paes_1177 1286784 - 1286233 - | hypothetical protein TERM 1463 1286926 - 1286915 - g 81 -4.4 -5.05782 | ATTGACGGTAAAAAA GTCT CGAC AGAC CTGAAAAACGAACTG Paes_1178 1286891 - 1287778 + | Methenyltetrahydrofolate cyclohydrolase TERM 1464 1287794 - 1287838 + F 78 -10.9 -3.14931 | gap 2 GCCGGGCATCGCATC GAC-A-GTTTCTGCAGGCAGG AATCC CCTGCCTGCGGAAACATCGCC TTCCTCAACACTCGC Paes_1179 1287864 - 1289237 + | DNA repair protein RadA Paes_1180 1289347 - 1289763 + | membrane protein of unknown function TERM 1465 1290001 - 1289965 - g 85 -13.2 -3.1637 | gap 1, opp_overlap 1289964 ACACAGGGTTATCAA CTACCCGATCATGCTCG GGAG CGAA-ATGATCGGGCAG GTGCTTGAAACAGGA Paes_1181 1289783 - 1290742 + | Alcohol dehydrogenase GroES domain protein TERM 1466 1291744 - 1291712 - g 81 -7 -4.72846 | gap 1, opp_overlap 1291740, overlap 1291739 1291740 CCATAGATGGAAAAA CGGC-ATTCGGCATG TCGC CCCGCCAAATCGCCG AGTCCGGCGTTTCTC TERM 1467 1291740 - 1291753 + G 81 -9.5 -4.06384 | opp_overlap 1291712 1291740 1291739 GTCGCCCCGCCAAAT CGCCG AGTC CGGCG TTTCTCATATTCCCG Paes_1182 1290745 - 1292283 + | ABC transporter related Paes_1183 1292300 - 1293322 + | inner-membrane translocator Paes_1184 1295205 - 1293319 - | Chloride channel core TERM 1468 1295476 - 1295464 - g 86 -9.1 -4.33708 | AAACGACGACCAAAA GCGGT GAG ACCGC CACAAAAAAGCCGGC Paes_1185 1295394 - 1295741 + | hypothetical protein TERM 1469 1295771 - 1295803 + F 100 -18.7 -3.56593 | opp_overlap 1295765 1295773 1295775 1295778, overlap 1295778 CCATATCAAGTTTAA GACACAAGCGATTCA TAC TGAATTGCTTGTGTC TTCTCATTGTGCAGT TERM 1470 1295801 - 1295773 - f 86 -13.3 -3.10732 | opp_overlap 1295771 1295778, overlap 1295765 1295775 1295778 ATATCAAGTTTAAGA CACAAGCGATTCA TAC TGAATTGCTTGTG TCTTCTCATTGTGCA TERM 1471 1295799 - 1295775 - f 73 -10.1 -3.10879 | opp_overlap 1295771 1295778, overlap 1295773 1295765 1295778 ATCAAGTTTAAGACA CAAGCGATTCA TAC TGAATTGCTTG TGTCTTCTCATTGTG TERM 1472 1295778 - 1295796 + F 71 -8.2 -3.74462 | opp_overlap 1295778 1295775 1295773 1295765, overlap 1295771 AAGTTTAAGACACAA GCGATTCA TAC TGAATTGC TTGTGTCTTCTCATT Paes_1186 1295832 - 1295999 + | hypothetical protein Paes_1187 1296786 - 1296031 - | PASTA domain containing protein Paes_1188 1297791 - 1296817 - | Polyprenyl synthetase Paes_1189 1297922 - 1297773 - | hypothetical protein Paes_1190 1298058 - 1298663 + | hypothetical protein Paes_1191 1298703 - 1299563 + | Sec-independent protein translocase, TatC subunit Paes_1192 1299568 - 1300599 + | putative esterase Paes_1193 1301209 - 1300583 - | dephospho-CoA kinase Paes_1194 1301550 - 1301206 - | hypothetical protein Paes_1195 1301716 - 1302321 + | Superoxide dismutase TERM 1473 1302349 - 1302371 + T 100 -13.5 -5.86061 | opp_overlap 1302349 ACGGTCTGTAAAAAA GGGGAAAGC ACAGA GCTTTCCCC TTTTTTTTAATGAAC TERM 1474 1302371 - 1302349 - T 100 -13.5 -5.00884 | opp_overlap 1302349 ACGGTCTGTAAAAAA GGGGAAAGC ACAGA GCTTTCCCC TTTTTTTTAATGAAC Paes_1196 1303261 - 1302407 - | hypothetical protein TERM 1475 1302841 - 1302823 - G 70 -3.8 -4.63527 | TGACCACCCCAAAAA GAGCATCT GAA AGAAACTC ATAACCGGAACGCAT TERM 1476 1303406 - 1303422 + H 100 -7.3 -6.09196 | opp_overlap 1303409 ATAATCCTTTTTCAA TAACGCT CTA AGCGTTG TTTTTTTATTTTACG TERM 1477 1303635 - 1303622 - g 82 -2.3 -5.31877 | opp_overlap 1303622 ACCTATGATAAAAAA CTGGT CGGG ACCGG ATTTTACAACCCTCA Paes_1197 1303481 - 1304665 + | hypothetical protein Paes_1198 1305265 - 1304687 - | hypothetical protein Paes_1199 1306162 - 1305356 - | thioredoxin Paes_1200 1306398 - 1307159 + | ABC transporter related TERM 1478 1307496 - 1307484 - g 71 -9.1 -3.55219 | opp_overlap 1307484 AATGGCATCAGACAA TCCGC ATG GCGGA TATGTCATAAGGGTT Paes_1201 1307179 - 1308333 + | SufBD protein Paes_1202 1308333 - 1308851 + | hypothetical protein Paes_1203 1308880 - 1309080 + | hypothetical protein Paes_1204 1309093 - 1309449 + | hypothetical protein TERM 1479 1310322 - 1310295 - g 91 -9.1 -4.64598 | opp_overlap 1310294 1310312 CAACGACCCCAAAAA GCCTCTGGCAA AGGGGA TCGCCAGCGGC AATATTCCTGTCACA TERM 1480 1310761 - 1310777 + G 72 -10.9 -3.04144 | AATGGCCGTCTCTCT TCTGCAG GCA CTGCAGA TATTACCCATACCCC Paes_1205 1309474 - 1311582 + | hypothetical protein Paes_1206 1311665 - 1312330 + | hypothetical protein Paes_1208 1313115 - 1314044 + | hypothetical protein Paes_1209 1315355 - 1314024 - | HI0933 family protein TERM 1481 1314564 - 1314553 - G 86 -3.6 -5.42975 | overlap 1314556 CGAGACAAAGAAAAA CAGG CCGG CCCG GAAAGCCCCTTATGG Paes_1210 1316542 - 1315373 - | efflux transporter, RND family, MFP subunit Paes_1211 1318973 - 1316610 - | protein of unknown function DUF214 Paes_1212 1319736 - 1318981 - | ABC transporter related TERM 1482 1320886 - 1320865 - g 78 -9.5 -3.86346 | GGACGCCGGCACAAA TGCCCAGAA ATAT TTCTGGACA ACCATCACCCATATT TERM 1483 1321717 - 1321704 - g 73 -3.9 -4.79053 | AAACAGGAAAACAAA TTCAT GTCC ATGAA CAGGGCTGCGGAGTA TERM 1484 1322341 - 1322315 - g 72 -6.7 -4.1552 | TATGCGCTGAATAAA TTTGACCTC ACACCCGAA GAGGTCAAA GGCAAGTGCGACGCA TERM 1485 1322596 - 1322586 - g 74 -3.2 -4.9251 | overlap 1322587 AAGAAAAAACCAAAA CGCT TCA AACG CAGCTCCACAACAGT Paes_1213 1319966 - 1323385 + | multi-sensor signal transduction histidine kinase Paes_1214 1323382 - 1323759 + | response regulator receiver protein TERM 1486 1324412 - 1324428 + G 81 -10.9 -3.68569 | TGATAACAGCATCTC GGTTCAG GAC CTGAACC TTCTTCCGTCAATAC Paes_1215 1323870 - 1325303 + | Deoxyribodipyrimidine photo-lyase Paes_1216 1325858 - 1326448 + | protein of unknown function DUF218 Paes_1217 1327697 - 1326666 - | NmrA family protein TERM 1487 1328238 - 1328228 - g 74 -2.4 -5.1101 | CCAGCATGGAAAAAA GCGG CAG CCCC ATAGAAGATCCGGAA Paes_1218 1327912 - 1328625 + | hypothetical protein Paes_1219 1329308 - 1328628 - | Protein of unknown function DUF1847 TERM 1488 1329461 - 1329430 - H 71 -2.2 -5.16071 | gap 1 AATGACGAACAAAAA CGCGG-GCCAGACAT TGT ATGAATGACACCACG GCATAAAACATCAAG TERM 1489 1329565 - 1329532 - g 100 -5.4 -6.14618 | gap 2, opp_overlap 1329532 1329534 CAGAAAACAAAAAAA GACGGCACAAGGCAAA CACT TTTGGC--GTGCCGTC TATCTCCGGGGCACA Paes_1220 1329482 - 1329790 + | hypothetical protein TERM 1490 1330296 - 1330281 - g 91 -7.6 -5.02476 | AGAGTTCCGAAAAAA CATTGG AGTG CCAATG GAGTTCCTGCACAAA Paes_1221 1330117 - 1330473 + | hypothetical protein Paes_1222 1331996 - 1330536 - | aminoacyl-histidine dipeptidase Paes_1223 1332076 - 1332342 + | hypothetical protein TERM 1491 1332390 - 1332364 - T 80 -4.5 -5.21709 | gap 1, opp_overlap 1332364 TTCGACATGAAAAAA CCACCTCTGC CGAACAAC GCA-AGGTGG TTTTTTTGGTCAAAC TERM 1492 1332364 - 1332390 + T 90 -4.5 -5.52384 | gap 1, opp_overlap 1332364 TTCGACATGAAAAAA CCACCTCTGC CGAACAAC GCA-AGGTGG TTTTTTTGGTCAAAC Paes_1224 1332972 - 1332439 - | hypothetical protein Paes_1225 1333837 - 1333067 - | N-acetyltransferase TERM 1493 1335882 - 1335859 - g 81 -4.5 -5.08601 | GCATCCGAAGAAAAA GCAGGCAGA CTGAGT TCTTCCCGC TGATCACACACCATG Paes_1228 1335207 - 1335938 + | two component transcriptional regulator, winged helix family TERM 1494 1336166 - 1336144 - f 86 -12.8 -3.13403 | overlap 1336142 TGCGCCTGATCAATA GATCCTGCTC TTC GAACAGGATC ACCACAGCTTTCACC TERM 1495 1336372 - 1336385 + F 72 -6.7 -4.183 | ACCATCACGCAGGAC TGTCG AGAT CGACA TTTGTTCGAGGTTGC TERM 1496 1336686 - 1336709 + F 80 -6.2 -4.81685 | gap 1, opp_overlap 1336693 TGATAACATTACAGT GGAAATACAAT ACG ATTGT-TTTCC TTTTTACTCGTTGCT Paes_1229 1336761 - 1337216 + | hypothetical protein TERM 1497 1337244 - 1337275 + F 95 -12.4 -3.58343 | gap 1, overlap 1337245 1337246 ATCGCACTGCCTTCA T-TTGCGGCCCACTC ATG GAGTGGGTCGCAGTA TTTCACAATCCTAAA TERM 1498 1337245 - 1337273 + F 100 -17.5 -3.36991 | overlap 1337244 1337246 TCGCACTGCCTTCAT TTGCGGCCCACTC ATG GAGTGGGTCGCAG TATTTCACAATCCTA TERM 1499 1337246 - 1337272 + F 100 -18.8 -2.61873 | overlap 1337245 1337244 CGCACTGCCTTCATT TGCGGCCCACTC ATG GAGTGGGTCGCA GTATTTCACAATCCT TERM 1500 1337706 - 1337693 - g 84 -3.9 -5.26119 | CTTCGAAAAAGAAAA GAAAA CTAT TTTTC ACCTTTGATGGGCGT TERM 1501 1337926 - 1337912 - g 70 -3.5 -4.65895 | gap 1, opp_overlap 1337913 1337914, overlap 1337913 1337914 GCGTCGATGCAAAAA GCGGCG GTTT CGCC-C TTTCGCCTCTGGTGT Paes_1230 1337305 - 1338174 + | hypothetical protein Paes_1231 1339250 - 1338477 - | acid phosphatase (Class B) TERM 1502 1338740 - 1338726 - G 73 -11.4 -2.75844 | opp_overlap 1338732, overlap 1338725 CTGTTCAGGCGAAAC GTCGGC CAC GCCGAC CCTGGCGAGATTCTC TERM 1503 1340140 - 1340127 - g 74 -5.9 -4.5442 | overlap 1340128 GGGGGAAGGAGAAAA CCGGG TCAA CCCGA TTCACGGGGCAGACC Paes_1232 1339579 - 1340472 + | NmrA family protein TERM 1504 1340526 - 1340563 + T 77 -11.5 -2.77182 | opp_overlap 1340529, overlap 1340529 CGGGCGTCTGTCACT GAAGCGAAAAACTAC TCGAACCT GAAGTTTTTCGCTTC TGCTTGAGTATGGAG Paes_1233 1341781 - 1340537 - | hypothetical protein TERM 1505 1341490 - 1341501 + g 70 -5.8 -4.17023 | opp_overlap 1341497, overlap 1341496 1341499 GTTCATTGACAATCC GCCA CAAC TGGC TTTTAGCCTGGTTGA Paes_1234 1342340 - 1341894 - | hypothetical protein TERM 1506 1343641 - 1343623 - g 74 -3 -4.93296 | opp_overlap 1343639, overlap 1343624 TCACCATCAGAAAAA TCAGAGCC TAC GGGTCTGT CAACGGTTTAACCGT TERM 1507 1343763 - 1343735 - g 93 -3.9 -5.58179 | TACCACAACAAAAAA GATCATAATCAGA AAC TTTGACTACGACC TCACATCAGGAAGCC Paes_1235 1342611 - 1344077 + | hypothetical protein TERM 1508 1344102 - 1344086 - T 100 -11.5 -6.34424 | opp_overlap 1344086 CGGGTAAAAAAAAAA GCCGCCA AAA CGGCGGC TTTCAAAATCCAGCT TERM 1509 1344086 - 1344102 + T 83 -10.8 -3.57263 | opp_overlap 1344086 CGGGTAAAAAAAAAA GCCGCC AAAAC GGCGGC TTTCAAAATCCAGCT Paes_1236 1344395 - 1344123 - | RNP-1 like RNA-binding protein TERM 1510 1344829 - 1344807 - g 85 -3.4 -5.38054 | CGTTACAAACAAAAA TGTCCAGC ACTCTCG ACCGGACA ACAACGGAGGTTCTC Paes_1237 1344731 - 1345534 + | methyl-accepting chemotaxis protein Paes_1238 1345547 - 1345876 + | hypothetical protein TERM 1511 1346417 - 1346403 - g 76 -3.5 -5.00616 | TTTTCCCTGAAAAAA CAGCC TCGCC AGCTG CTGATACTCGGAGCC Paes_1239 1345881 - 1347368 + | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 1512 1347804 - 1347794 - g 72 -8.2 -3.73953 | ACTACCTGGACGAAA CCCC GCT GGGG GCAGAGCTCGTCATC Paes_1240 1347442 - 1347912 + | nuclear protein SET Paes_1241 1348103 - 1347909 - | hypothetical protein Paes_1242 1348332 - 1348093 - | hypothetical protein TERM 1513 1348410 - 1348391 - R 91 -2 -5.85178 | opp_overlap 1348406, overlap 1348406 AATATGCAAAAAAAA CCGGTTCA GTGA CAATCCGG CTTCTGCAGGATCTA Paes_1243 1348846 - 1348427 - | hypothetical protein Paes_1244 1349140 - 1348853 - | hypothetical protein Paes_1245 1349844 - 1349224 - | hypothetical protein Paes_1246 1351105 - 1349924 - | iron-containing alcohol dehydrogenase TERM 1514 1349961 - 1349981 + g 90 -7.6 -4.91873 | CTCATATACTGATCG CGATGCAG CTCCA CTGCATTG TTTTTGCTTCGTGTC TERM 1515 1351057 - 1351027 - G 77 -10.4 -3.65314 | CGTAACCGGCAATAA GATCCGGGAGAAGC CGA ACCTTTCCCGGACC AAAAATAACATTGGG Paes_1247 1351512 - 1351105 - | hypothetical protein TERM 1516 1351190 - 1351173 - G 76 -9.1 -3.74224 | overlap 1351174 1351184 CTGAAATGAGCGAAA CTGCGCC AAAG GGCGCAA CCACTTTTGCTGCCG Paes_1248 1352688 - 1351543 - | KWG Leptospira repeat protein Paes_1249 1353152 - 1352685 - | protein of unknown function DUF134 TERM 1517 1353220 - 1353192 - R 100 -11.8 -5.76949 | TATTTTCAAAAAAAA CAACCGGCAG TTTTGTGTG CTGCCGGTTG CCACATAACAATCCT Paes_1250 1354264 - 1353245 - | C4-dicarboxylate transporter/malic acid transport protein Paes_1251 1354701 - 1354297 - | OsmC family protein TERM 1518 1354600 - 1354583 - G 76 -7.7 -4.2243 | gap 1, opp_overlap 1354587 AGAAACAGCGTAAAA GGC-TCGG GAG CCGAAGCC TCCCCTCCATTTTTC Paes_1252 1355644 - 1354898 - | cobalamin 5'-phosphate synthase TERM 1519 1355360 - 1355373 + g 74 -5.9 -4.56597 | opp_overlap 1355360 TTTCATAATACGCAA CCGGG ACTC CCTGG TTTTTCCGCCGAAAA Paes_1253 1356540 - 1355644 - | alpha/beta hydrolase fold TERM 1520 1356411 - 1356401 - G 77 -6.8 -4.4727 | CGAATACTGAGAAAA CTGC CAT GCAG AAGCACTACAAGAGG Paes_1254 1357615 - 1356554 - | nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase TERM 1521 1356836 - 1356818 - G 71 -3.1 -4.73677 | gap 1, overlap 1356819 GGCAGAAGAAATAAA GCC-GTCG ACAA CAACAGGC ATTCCCACCGAAGCA Paes_1255 1358522 - 1357995 - | Adenosylcobinamide kinase TERM 1522 1358455 - 1358476 + g 70 -3.7 -4.6902 | overlap 1358465 CCCGGATAGCCTAAC GCCTTTTTG AGCG CAAAAGAGC TTTTTCCGCTTCTCG Paes_1256 1358761 - 1359348 + | hypothetical protein TERM 1523 1359631 - 1359612 - f 100 -5.1 -5.70829 | AACACCACAAAAAAA CAACTTT GGCATG AAAGTTG AAACTACAAACACAG TERM 1524 1360215 - 1360204 - g 70 -3.6 -4.67641 | overlap 1360206 ATCGCAAAAGCAAAA GCCA CAGT CGGC AGTGTTGAGATGGAT Paes_1257 1359622 - 1360305 + | hypothetical protein TERM 1525 1360337 - 1360357 + F 100 -12.6 -6.28401 | opp_overlap 1360337 AAAAGTCGTTGCAAA CCCTCCTG AGAAA CAGGAGGG TTTTTTTATTTTTTC TERM 1526 1360357 - 1360337 - f 93 -12.6 -3.55203 | opp_overlap 1360337 AAAAGTCGTTGCAAA CCCTCCTG AGAAA CAGGAGGG TTTTTTTATTTTTTC Paes_1258 1360444 - 1361073 + | hypothetical protein Paes_1259 1361088 - 1361660 + | hypothetical protein TERM 1527 1362324 - 1362312 - g 77 -3.3 -5.07107 | CAAATGTTGAAAAAA GCATC AAG GAAGC AGAAAACAACAAAAG TERM 1528 1362357 - 1362339 - g 93 -8.8 -5.12916 | CAGAAAACAACAAAA GCGTCAAG GGC CTTGTCGC AGCCGGAAAACTGAA Paes_1260 1361660 - 1362514 + | hypothetical protein TERM 1529 1362674 - 1362637 - g 79 -4.2 -5.11836 | gap 1, opp_overlap 1362639, overlap 1362639 1362640 AGAGGGAAAACAAAA CAGTGTTCAGGCTGC AAAGAGCGA GCAGCCTGAAC-CAA TACTTGTCGAGGTAT TERM 1530 1362672 - 1362639 - g 82 -9 -4.17301 | gap 1, opp_overlap 1362639, overlap 1362637 1362640 AGGGAAAACAAAACA GTGTTCAGGCTGC AAAGAGCGA GCAGCCTGAAC-C AATACTTGTCGAGGT TERM 1531 1364919 - 1364907 - g 71 -3.4 -4.7373 | CTATTTCAGGAAAAA TCAG TGGTC CTGA CAAAAAAGGCATTGA Paes_1261 1362530 - 1365202 + | hypothetical protein Paes_1262 1366008 - 1365205 - | Xylose isomerase domain protein TIM barrel TERM 1532 1366094 - 1366082 - H 100 -6.9 -5.82281 | overlap 1366083 1366084 AAAGATACAAAAAAA GCCGG GGA CCGAC CCCGCATCGAATGCC TERM 1533 1366428 - 1366395 - g 71 -2.3 -4.96848 | overlap 1366396 GCCTGCACATAAAAA GCCTTCAGAAACGAC CCCC GAAGTTCCCGAAGGT TTCAGCGTCATGACA Paes_1263 1366255 - 1366962 + | ErfK/YbiS/YcfS/YnhG family protein Paes_1264 1368106 - 1367096 - | quinone oxidoreductase, YhdH/YhfP family Paes_1265 1369408 - 1368155 - | ABC transporter related TERM 1534 1368416 - 1368397 - G 74 -10.8 -3.17075 | CGGCCTCTAAGGCAA GTTCCAGA GCAC TCTGGAAC GCCGTACCGCTGATC TERM 1535 1368804 - 1368772 - G 80 -11.3 -3.40403 | opp_overlap 1368773, overlap 1368799 CTGCGTCCATGAGAA TGAGCCTGTCGGCTA TTT CAGACGAGAGGCTCA GATCGTGACTGACCA Paes_1266 1370615 - 1369581 - | transport system permease protein Paes_1267 1371589 - 1370615 - | cobalamin biosynthesis protein CobD TERM 1536 1370985 - 1370970 - G 70 -4 -4.67982 | CGCGACGGAAGAAAA TTGACA AGAT CGTCAA AACGCGCCGAAGCCC Paes_1268 1372680 - 1371586 - | L-threonine-O-3-phosphate decarboxylase TERM 1537 1371822 - 1371832 + g 71 -3.2 -4.78764 | ATCCACGGATCGCGA TGTC CGG GACG TTTTTCATACGTTTA TERM 1538 1372565 - 1372540 - G 78 -5.3 -4.74767 | overlap 1372554 ACAATGAAGAGAAAA CGCGTCGAGAG AAAC CTCCGGAAGCG ATGGAGAAAGCGGAC Paes_1269 1374199 - 1372718 - | cobyric acid synthase CobQ TERM 1539 1373737 - 1373748 + g 70 -5.8 -4.19238 | opp_overlap 1373725 TCACCGGAGCATCAG CTGC TTCG GCAG TTTTAAAATTGACAA Paes_1270 1374846 - 1374196 - | cob(II)yrinic acid a,c-diamide reductase TERM 1540 1374714 - 1374704 - G 70 -5.4 -4.3739 | overlap 1374706 CACGGCTGCATAAAA CCTA CGC TAGG CGCATGATGCGCTGC Paes_1271 1376852 - 1374948 - | TonB-dependent receptor plug TERM 1541 1376333 - 1376346 + g 75 -4.5 -4.78107 | CGGCATAAGCTTCAG GGGTT GACG AGCCC TTTTTCGTAATGATA TERM 1542 1376966 - 1376953 - R 72 -6.7 -4.27694 | TGAACGAACAAATAA CGCTT CAGG AAGCG CGGCTAGTATCAAAA TERM 1543 1377210 - 1377168 - R 73 -4.3 -4.77438 | gap 1 AGTGACCAGGAAAAA CTCCAGCTT-TATTGTCATG TGGC CATGACAGAATAAACTGAAG CATACCGTTATTACA TERM 1544 1377318 - 1377328 + r 71 -4 -4.82901 | AACAATTGAGCCTAA TTGT ACT ACAA TTTTTATCGAAAACA Paes_1272 1379815 - 1377356 - | 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase TERM 1545 1378671 - 1378638 - G 70 -5.3 -4.3739 | gap 1 CAGGGCCCCAGAAAA TCCGGAAGCGTACC ACCATCA GGCTCG-TTCCGGA CGTCATAGGGGACGT TERM 1546 1379196 - 1379215 + g 85 -2.9 -5.40072 | gap 1, opp_overlap 1379186 1379182 AGATAGCTTATCGGC CCGACAAG CACCA CTT-TCGG TTTTTTTACACAAAA TERM 1547 1379856 - 1379834 - R 80 -7.6 -4.58943 | opp_overlap 1379832 1379848 GTTAGAGAAAAAGAA GCAGGACAGG TCT CCTGGCTTGC CGGTTCTGCAGCACC TERM 1548 1380087 - 1380072 - R 73 -4.7 -4.74504 | AGGGCAAGCCAAAAA CAAGC TCCCAG GCTTG CCTGCAGAAATCCAC TERM 1549 1380296 - 1380258 - R 71 -10.3 -2.74192 | gap 1, overlap 1380255 GACCGGTCAACATGA GGGCCATGGACAGCGCTG GTAT CAGCACTGTCCGTC-CCC GCTTGACAAACAAGC Paes_1274 1382920 - 1380335 - | TonB-dependent receptor plug TERM 1550 1382145 - 1382127 - G 74 -5.9 -4.58395 | overlap 1382139 TCGATCCCTGAAAAA TCCGGTG AAAAA CCCCGGA TCGACACTCCAGAGA Paes_1275 1386961 - 1383209 - | Cobaltochelatase TERM 1551 1384219 - 1384275 + g 72 -10.8 -3.09015 | gap 1, opp_overlap 1384218, overlap 1384229 AATGGGGCACCATAT CGCGCACGATGCTGCTG-GTCTCGATG GTTG CATCGACACGCGGCCGGTTCATGCGCG TTCCGTCAATCTCGA TERM 1552 1384576 - 1384557 - G 71 -2 -5.00616 | opp_overlap 1384574, overlap 1384558 TCGGCCGCGAAAAAA TTCCTGCC TGAC GGCAGTAC ATCAGGCTTACCGGA TERM 1553 1384806 - 1384829 + g 77 -6 -4.61633 | gap 1, opp_overlap 1384805 1384807, overlap 1384807 ACTGCATTTTCAAAC ACATCCTCGCC CTG GGC-AGGATGC TTTTTAGCGATCTCT Paes_1276 1388058 - 1387003 - | Magnesium chelatase Paes_1277 1390007 - 1388055 - | Magnesium chelatase TERM 1554 1388208 - 1388224 + g 73 -3.6 -4.83169 | opp_overlap 1388207, overlap 1388209 GACGAGAAAACGGAT GCGCTC CTCCA GAGCGA TTTTTCTCGAAAGCT TERM 1555 1388451 - 1388472 + g 72 -5.1 -4.56597 | gap 1, opp_overlap 1388466, overlap 1388453 CACCGACGACGTAAC CG-GGAGGTT GAC AACCGCCTCG TTTTTACGGAACGAG TERM 1556 1388620 - 1388606 - G 74 -2.8 -4.91109 | CGTCGACGACAAAAA TCAGCA GAT TGCCAA GCCGTTTCTCCCTGA TERM 1557 1389608 - 1389598 - G 74 -3.2 -4.91109 | opp_overlap 1389607 GCCGGATGACAAAAA GAGA TAC CCTC CCGTTCGACGCGATT Paes_1278 1391728 - 1390013 - | TonB-dependent receptor TERM 1558 1390296 - 1390286 - G 72 -8.2 -3.75169 | overlap 1390287 CATGATGGTATGAAA CGGC TTT GCCG GAAGCCAGAACCCTG TERM 1559 1391255 - 1391244 - G 81 -5.8 -4.83615 | TATCCTGCAGAAAAA CCTG CCGA CAGG CGCTCTGTCCCCCCT Paes_1279 1395510 - 1391734 - | Cobaltochelatase TERM 1560 1394014 - 1393995 - G 71 -3.4 -4.8543 | GAATGGTCAGAAAAA CGTTACCG TTGA CGGTCCCG GGAAAGAGCAGCCTG TERM 1561 1395289 - 1395277 - G 83 -5.5 -5.06103 | overlap 1395278 ACAAGCCTCAAAAAA CGCGT CGA ACGCA GGAAAAGAAGCCTTT Paes_1280 1396547 - 1395507 - | Radical SAM domain protein Paes_1281 1397551 - 1396544 - | Xylose isomerase domain protein TIM barrel TERM 1562 1396764 - 1396754 - G 70 -5.4 -4.31688 | AAGAGCAAGCGAAAA TCTG TCC CAGA AAGTCCGGGCTCCAC TERM 1563 1397880 - 1397861 - H 70 -9.2 -3.17443 | opp_overlap 1397875, overlap 1397855 1397859 TTGACAGAACATATA TGCCGGCA AATA TGCCGGCT GAGGATTACAGCAGC Paes_1282 1398678 - 1400774 + | TonB-dependent receptor TERM 1564 1400822 - 1400778 - f 100 -14.3 -3.63837 | opp_overlap 1400776, overlap 1400779 ATAAGCCTGTAACAA CTCCATCGCGGTGGGGATCAA ACC CCGATCCCCACCGCGATTCAC CATTCACTATTCACT TERM 1565 1400821 - 1400779 - f 100 -17.8 -2.7782 | opp_overlap 1400776, overlap 1400778 TAAGCCTGTAACAAC TCCATCGCGGTGGGGATCAA ACC CCGATCCCCACCGCGATTCA CCATTCACTATTCAC TERM 1566 1401636 - 1401666 + G 72 -10.3 -3.4072 | ACGGCTAGCGTTATC GCCCTCTCCGGCC TCATC GGCTGGATCGGGC TTGTCATGCCGCATG Paes_1283 1400883 - 1401881 + | transport system permease protein Paes_1284 1401881 - 1402711 + | ABC transporter related TERM 1567 1403107 - 1403096 - g 86 -7.2 -5.00884 | opp_overlap 1403096, overlap 1403055 AGCTCGCCGAAAAAA CCGG CATC CCGG TCTATCTCGCCTCAC Paes_1285 1402708 - 1403748 + | periplasmic binding protein Paes_1286 1404929 - 1403820 - | cobalamin (vitamin B12) biosynthesis CbiD protein TERM 1568 1404199 - 1404172 - G 71 -9.1 -3.53811 | opp_overlap 1404197 GTCAGGTTGCGGAAA CCCCCGTCATG CTGAAT CATGTCGAGGG TGCTGCCGACCCTGT Paes_1287 1405699 - 1404926 - | Precorrin-6x reductase CbiJ/CobK Paes_1288 1407583 - 1405703 - | precorrin-4 C11-methyltransferase Paes_1289 1408800 - 1407598 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Paes_1290 1410202 - 1408793 - | precorrin-3B C17-methyltransferase Paes_1291 1410945 - 1410217 - | precorrin-2 C20-methyltransferase Paes_1292 1411895 - 1410942 - | anaerobic cobalt chelatase TERM 1569 1411349 - 1411329 - G 74 -2.5 -5.0916 | overlap 1411330 TCCCGAAGAGAAAAA TTCGTTGCC GTG AGCGACAAA GAGCATGGCGGCACC Paes_1293 1412675 - 1411914 - | uroporphyrin-III C-methyltransferase Paes_1294 1414190 - 1412688 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 1570 1412807 - 1412834 + g 85 -12 -3.57144 | opp_overlap 1412805 ATACCGTGTAAACCT CTTCCCAACGGT AGTG ACCGATGGGAGG TTTGCAGATAAAGGC TERM 1571 1413305 - 1413293 - G 71 -3.4 -4.82901 | TGCCTTGTATAAAAA GATC GTGCG GATC GGCTGGCAGGCAGGT Paes_1295 1415359 - 1414178 - | protein of unknown function DUF105 Paes_1296 1416530 - 1415349 - | putative iron complex transport system substrate-binding protein TERM 1572 1415439 - 1415423 - G 70 -5.9 -4.18018 | overlap 1415425 GGTCCGGATGGAAAA TACTGAT AAG ATCAGCA AGGATGACATGGGGT TERM 1573 1415778 - 1415796 + g 76 -3.7 -4.90002 | overlap 1415779 CCCTTTCCTGCTGTA CCCGGCT ATCAC GGCCGGC TTTTCTTCTCTGTTC TERM 1574 1416194 - 1416226 + g 77 -8.5 -4.08216 | gap 1, opp_overlap 1416194 CCAGCATATCGAGAA GCGACACCTG-GAA CCCGTT TTCGCAGGTGACGC TTTTCAGCGGAATGC Paes_1297 1417603 - 1416530 - | ABC transporter related Paes_1298 1418688 - 1417600 - | transport system permease protein TERM 1575 1417669 - 1417681 + g 74 -10.5 -3.14344 | opp_overlap 1417669 1417668, overlap 1417675 AGGCGAACCGATAAG CGCCG TAA CGGCG TTGATCGGCAGCGTC Paes_1299 1419934 - 1418690 - | periplasmic binding protein Paes_1300 1420235 - 1419927 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1576 1420184 - 1420203 + g 77 -7 -4.51301 | ATGGAATATCCTGAC GGGGAGCT CTCA GGCGCCCC TTTCGTTTTTTCTTC TERM 1577 1420309 - 1420264 - R 93 -12.7 -3.50572 | overlap 1420265 ATCCATCCGATAGAA CCGCACCGACCTCCCATGATG AACA CATCATGGAAGATCGATACAT CACAACTCTTCAACT TERM 1578 1420308 - 1420265 - R 100 -16.2 -2.70022 | overlap 1420264 TCCATCCGATAGAAC CGCACCGACCTCCCATGATG AACA CATCATGGAAGATCGATACA TCACAACTCTTCAAC Paes_1301 1422228 - 1420324 - | TonB-dependent receptor TERM 1579 1421559 - 1421578 + g 81 -7.1 -4.62783 | ACTTGTCAGTGTTGC CGAGCGC CATCGT GTGCTCG TTTTTCAGATCCCTG TERM 1580 1422650 - 1422608 - R 73 -4.3 -4.77438 | gap 1 AGTGACCAGGAAAAA CTCCAGCTT-TATTGTCATG TGGC CATGACAGAATAAACTGAAG CATACCGTTATTACA TERM 1581 1422835 - 1422799 - R 100 -16.8 -3.28785 | overlap 1422794 1422792 CCTCAAAACACTTAA TGTATCGTTGCCCTGC AGCAG ACAGGACAACGATACA TGCGATCAAGCGGTT Paes_1302 1423317 - 1422841 - | hypothetical protein Paes_1303 1423462 - 1423884 + | NUDIX hydrolase Paes_1304 1423859 - 1424740 + | periplasmic binding protein Paes_1305 1424844 - 1426109 + | major facilitator superfamily MFS_1 TERM 1582 1427380 - 1427362 - g 71 -3 -4.77036 | overlap 1427363 1427364 TGTCACGAGTAAAAA CCCGCGCA AGG TGCGCCAA ATCATGCAGAATTTC TERM 1583 1427446 - 1427435 - g 73 -3.6 -4.8543 | GAAGTGGCAGAAAAA GACC TTCT GGCC AAATGGCGCCCACCG Paes_1306 1426187 - 1427656 + | polynucleotide adenylyltransferase/metal dependent phosphohydrolase Paes_1307 1427747 - 1429030 + | adenylosuccinate lyase TERM 1584 1429050 - 1429072 + F 100 -14.9 -4.36433 | opp_overlap 1429032 GCCATCAGCCACCGT TACCCGGGC ATAAC GCCCGGGTA TTTGTTAATATTTAC Paes_1308 1429258 - 1429653 + | positive regulator of sigma E, RseC/MucC TERM 1585 1430306 - 1430296 - g 100 -6.8 -5.60993 | overlap 1430298 GCGGCCACAAAAAAA GCCT GTG AGGC GGGATGTATCGCCTG Paes_1309 1429660 - 1430499 + | electron transport complex, RnfABCDGE type, B subunit TERM 1586 1431482 - 1431468 - g 73 -3.5 -4.85782 | overlap 1431473 1431476 GTCGGCAAAAACAAA CCAGA TCATC TCCGG TGGACCGATGATGGG Paes_1310 1430500 - 1431825 + | electron transport complex, RnfABCDGE type, C subunit TERM 1587 1432591 - 1432609 + G 75 -5.2 -4.72272 | CCACATGGTAACCGG CGGTCTGA TTC TCGGAGCG TTTTTCATGGCAACC Paes_1311 1431842 - 1432834 + | electron transport complex, RnfABCDGE type, D subunit Paes_1312 1432831 - 1433376 + | electron transport complex, RnfABCDGE type, G subunit Paes_1313 1433373 - 1433975 + | electron transport complex, RnfABCDGE type, E subunit Paes_1314 1433975 - 1434553 + | electron transport complex, RnfABCDGE type, A subunit TERM 1588 1434610 - 1434585 - T 87 -6.8 -5.28315 | opp_overlap 1434585 ACAAAACCGAAAAAA GCCGTCTTGC GTAAAA ACAAGGCGGC TTTTTCATTGCACAT TERM 1589 1434585 - 1434610 + T 89 -8.3 -4.86621 | opp_overlap 1434585 ACAAAACCGAAAAAA GCCGTCTTG CGTAAAAA CAAGGCGGC TTTTTCATTGCACAT Paes_1315 1435971 - 1434646 - | amino acid permease-associated region TERM 1590 1435163 - 1435145 - G 76 -7.4 -4.24123 | overlap 1435162 GCAACAATCGTAAAA CCTGTCTC GCC GAGAGAGG GCCTGGCCGCAACCG TERM 1591 1435603 - 1435591 - G 75 -5.5 -4.67011 | overlap 1435599 AAGGTGACGCAAAAA CGGTA AAC CACCG CCACCGTGAAAGAAT TERM 1592 1436066 - 1436039 - R 76 -4 -5.12916 | opp_overlap 1436046, overlap 1436040 GATAAAAGAAGAAAA CGCCAATGCGAC AAAG GTCGCTTCATCG GCTTTTAGGCCCAAA Paes_1316 1436246 - 1436061 - | hypothetical protein Paes_1317 1436523 - 1436356 - | hypothetical protein Paes_1318 1437946 - 1436663 - | transposase IS116/IS110/IS902 family protein TERM 1593 1437585 - 1437599 + g 70 -5.7 -4.40561 | TTATCCCAACGCCCA TCGAG CAGTT CTCGA TTCTTTTTGACCGCA Paes_1319 1439035 - 1438076 - | protein of unknown function DUF1568 TERM 1594 1438648 - 1438626 - G 80 -11.4 -3.28416 | CACCATGGATACGAA GCCAGTTCTT CAA AAGAACTGAC AAGTCGTGCTCGCAA TERM 1595 1438818 - 1438803 - G 70 -6.8 -4.06502 | TACCCGGAAAGCAAA CGACGC ATGA ACGTCG ATAAGCCCTGTTCCC Paes_1320 1440051 - 1439155 - | zinc/iron permease TERM 1596 1439320 - 1439304 - G 72 -4.3 -4.62302 | CAACACCGCCAAAAA GGATGCC CAT GACCTCC TGAGGAATAACCCCC TERM 1597 1439838 - 1439820 - G 84 -3.8 -5.20328 | overlap 1439837 CGCCAAAAAAAGAAA GCGCATTA ACC CAATGAGC TCCGGCTTCGCCAAA Paes_1321 1441078 - 1440266 - | protein of unknown function DUF323 Paes_1322 1442628 - 1441075 - | AAA ATPase central domain protein Paes_1323 1444268 - 1442649 - | DnaK like protein TERM 1598 1443294 - 1443349 + g 90 -14.6 -2.82635 | gap 1 TTTCAGATCCTCCTT GCGTATGCCCGCTCGGTCGCGCGCCTG ATC CAG-CGCGCGGTCAAGCGTGCGGACGA TGTGCTGGTAGAGGT TERM 1599 1443372 - 1443384 + g 75 -4.7 -4.82901 | GTAGAGGTTGTTCAT GCCCG GCT CGCGC TTTTTCTCAAGCACC Paes_1324 1444841 - 1444287 - | hypothetical protein Paes_1325 1446174 - 1444828 - | hypothetical protein TERM 1600 1445067 - 1445092 + g 77 -11.9 -3.24032 | opp_overlap 1445054, overlap 1445064 TACCCGCTACGACGT TATCCTGTGGC CGAA GCCACAGGACA TGTTCATTCCGCGCT Paes_1326 1446648 - 1446412 - | NADPH-dependent FMN reductase Paes_1327 1447778 - 1446645 - | glucose sorbosone dehydrogenase TERM 1601 1447635 - 1447621 - G 95 -10 -4.64676 | opp_overlap 1447618 1447621, overlap 1447625 CCATCCGGAAGAAAA GCCATG GCC CATGGC TCATTGAATGTCCCA Paes_1328 1447797 - 1448114 + | hypothetical protein TERM 1602 1448734 - 1448719 - f 79 -4 -5.24129 | TGGTTGTAGAAAAAA TGGTTA AACT CAACCA AAGAGGTTACACGCA Paes_1329 1448749 - 1448934 + | transposase IS3/IS911 family protein Paes_1330 1448938 - 1449294 + | hypothetical protein Paes_1331 1449865 - 1451907 + | phosphofructokinase Paes_1332 1452146 - 1451961 - | protein of unknown function DUF1568 Paes_1333 1453212 - 1452433 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1603 1453135 - 1453118 - G 70 -4.1 -4.71426 | overlap 1453119 TTTGCATCAATAAAA CCGACAA GTGG TTGTCGC CAAGTATTATAACTG Paes_1336 1458445 - 1454858 - | hypothetical protein TERM 1604 1457219 - 1457231 + g 75 -4.7 -4.86731 | CTCTAGGGCAGTGTT CCAGG CTT CCGGG TTTTCTTTGCGCCGG TERM 1605 1457656 - 1457634 - G 78 -7.8 -4.42386 | overlap 1457636 GGTGGATTGAGAAAA TATCCTCTTT CCG AAAGAGGATC TAACCAAACAGCATC TERM 1606 1457654 - 1457636 - G 79 -10.4 -3.82117 | overlap 1457634 TGGATTGAGAAAATA TCCTCTTT CCG AAAGAGGA TCTAACCAAACAGCA TERM 1607 1458652 - 1458682 + H 95 -11.8 -4.30793 | overlap 1458649 1458653 TTTACTCAATTCGGC CGTTGCAGGCGTGC GCA GCGCGCCTGGAACA TTATTTATTATCTGC TERM 1608 1458653 - 1458681 + H 100 -15.3 -3.17391 | overlap 1458652 1458649 TTACTCAATTCGGCC GTTGCAGGCGTGC GCA GCGCGCCTGGAAC ATTATTTATTATCTG TERM 1609 1458953 - 1458934 - H 71 -8.6 -3.56347 | overlap 1458932 ATACTGCAAACAACA CCCGAATC CGGC GATTCGAG CTGAATCTCACCTTT TERM 1610 1459772 - 1459761 - g 79 -2.2 -5.24129 | GTCTGGCATAAAAAA TCCC GATC AGGA CAACGCGAAACCTGT Paes_1338 1459087 - 1460106 + | ApbE family lipoprotein TERM 1611 1460506 - 1460485 - T 100 -13 -3.82202 | TATTCGTAAAGAGAA GGGTCGGC ACGGGG GCCGACCC CTACGGCAATCTCAA Paes_1339 1462192 - 1460546 - | Glucose-6-phosphate isomerase Paes_1340 1462651 - 1462232 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Paes_1341 1462939 - 1464267 + | ammonium transporter Paes_1342 1464290 - 1464631 + | nitrogen regulatory protein P-II Paes_1343 1464681 - 1465355 + | hypothetical protein TERM 1612 1465487 - 1465466 - f 100 -12.3 -4.65916 | opp_overlap 1465466 CTCATTGCAACAAAA CAACGGGCC TCAA AGCCCGTTG TTTTGTTGCAGAAAT TERM 1613 1465466 - 1465487 + F 100 -11.6 -4.63486 | opp_overlap 1465466 CTCATTGCAACAAAA CAACGGGC CTCAAA GCCCGTTG TTTTGTTGCAGAAAT Paes_1344 1465552 - 1465995 + | putative transcriptional regulator, CopG family TERM 1614 1466274 - 1466262 - g 82 -3.3 -5.31456 | GCAATGGACAAAAAA CCGTT CTC AGCGG GACGCTCACCCCGAT Paes_1345 1465976 - 1466827 + | hypothetical protein TERM 1615 1467294 - 1467320 + G 85 -8.7 -4.55023 | opp_overlap 1467299, overlap 1467297 CGGCATCAACACCCT CAACATGGCGC TGCCT GCGCTATGCTG TTTTCTGATCTTCGC TERM 1616 1467363 - 1467378 + G 79 -4.6 -4.96848 | overlap 1467364 CCGGAAGAAACTCTC CCCTGC TGTA GCAGGA TTTTTCTGTGGCACG Paes_1346 1466980 - 1467576 + | cobalamin (vitamin B12) biosynthesis CbiM protein Paes_1347 1467573 - 1468025 + | hypothetical protein Paes_1348 1468015 - 1468755 + | cobalt ABC transporter, inner membrane subunit CbiQ TERM 1617 1468862 - 1468848 - g 74 -2.7 -4.92363 | overlap 1468849 AAAGATGGAGAAAAA GCCGG AATAA CCGGG ACAAACGGAGCAGGT Paes_1349 1468752 - 1469405 + | ABC transporter related Paes_1350 1470596 - 1469463 - | hypothetical protein TERM 1618 1470653 - 1470673 + r 100 -16.9 -3.81951 | opp_overlap 1470653 CATTTTCAAGGAAAA GACCCCCTG CAA CAGGGGGTC TTTCATACTATCAAC TERM 1619 1470673 - 1470653 - R 100 -16.9 -4.41494 | opp_overlap 1470653 CATTTTCAAGGAAAA GACCCCCTG CAA CAGGGGGTC TTTCATACTATCAAC Paes_1351 1470900 - 1470697 - | hypothetical protein Paes_1352 1472035 - 1470965 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1620 1472175 - 1472141 - R 100 -13.7 -3.53012 | opp_overlap 1472149, overlap 1472143 1472149 CCTTCGGCTCTTAAA CACGAAAACCTGCCT TTTTG AGGCAGGTTTTCGAA AATACAGACCGTGCA TERM 1621 1472173 - 1472143 - R 100 -18.5 -3.34398 | opp_overlap 1472149, overlap 1472141 1472149 TTCGGCTCTTAAACA CGAAAACCTGCCT TTTTG AGGCAGGTTTTCG AAAATACAGACCGTG TERM 1622 1472167 - 1472149 - R 89 -10.3 -4.49756 | opp_overlap 1472149, overlap 1472143 1472141 TCTTAAACACGAAAA CCTGCCT TTTTG AGGCAGG TTTTCGAAAATACAG TERM 1623 1472149 - 1472167 + r 86 -11 -4.09685 | opp_overlap 1472149 1472143 1472141 TCTTAAACACGAAAA CCTGCCTT TTT GAGGCAGG TTTTCGAAAATACAG Paes_1353 1473402 - 1472209 - | arsenite-activated ATPase ArsA Paes_1354 1475621 - 1473636 - | Lytic transglycosylase catalytic Paes_1355 1476462 - 1475749 - | tRNA pseudouridine synthase A TERM 1624 1475807 - 1475787 - G 100 -7.5 -5.60993 | overlap 1475788 TCTCCCACAAAAAAA GTCCAGCCG GAT CAGCTGGAA GCAGCCCCTTGATCG TERM 1625 1475806 - 1475788 - G 86 -11 -3.95873 | overlap 1475787 CTCCCACAAAAAAAG TCCAGCCG GAT CAGCTGGA AGCAGCCCCTTGATC TERM 1626 1477169 - 1477153 - g 100 -4.3 -5.48825 | overlap 1477155 TATTATGGAAAAAAA GGCGCAC TCG GTTCACC GTATGCCATAAAAAA Paes_1356 1476715 - 1478643 + | alpha amylase catalytic region Paes_1357 1478709 - 1479620 + | PfkB domain protein Paes_1358 1479719 - 1481482 + | Na+/solute symporter TERM 1627 1481677 - 1481659 - g 74 -3.1 -4.9725 | gap 1, overlap 1481669 ATTGCCACAGAAAAA GCCGA-AG CGAT CTGCCGGC TCTATCCGGAAAAAA Paes_1359 1481485 - 1482090 + | maf protein Paes_1361 1483175 - 1483789 + | anti-sigma-factor antagonist TERM 1628 1483895 - 1483906 + G 72 -5.8 -4.34789 | overlap 1483893 CATATATAACCATCA TCGC ACTG GCGA TTGTTTTCTGGATTG Paes_1362 1483858 - 1484631 + | fatty acid hydroxylase TERM 1629 1484645 - 1484673 + F 84 -7.4 -4.92777 | opp_overlap 1484647, overlap 1484647 GACCATCTGAAAAGA AACTGGGCAGAA TCTTT TTCAGCCCAGTA TTTTTCATTAATATT TERM 1630 1484671 - 1484647 - f 91 -10 -4.67048 | opp_overlap 1484645 1484647 CCATCTGAAAAGAAA CTGGGCAGAA TCTTT TTCAGCCCAG TATTTTTCATTAATA TERM 1631 1484647 - 1484671 + F 82 -10 -4.07008 | opp_overlap 1484647, overlap 1484645 CCATCTGAAAAGAAA CTGGGCAGAA TCTTT TTCAGCCCAG TATTTTTCATTAATA TERM 1632 1485483 - 1485469 - g 82 -2.1 -5.34555 | TGACATCATAAAAAA TCTGC TTGCT ACAGA CGGTTTATTTCTGCT Paes_1363 1484738 - 1485862 + | Cyclopropane-fatty-acyl-phospholipid synthase Paes_1364 1487133 - 1485871 - | hypothetical protein TERM 1633 1486402 - 1486388 - G 71 -2.8 -4.81644 | GAAATAAAACGAAAA CCATGA AGT TCATCG GCAAACAGATGTCGA TERM 1634 1486914 - 1486893 - G 74 -2.3 -5.06414 | gap 1, overlap 1486895 CGTGTCGAAGAAAAA GGCGGT-AAT TGG ATTCACCGGC ACTGCTGATACCAGC TERM 1635 1487291 - 1487272 - R 77 -7.1 -4.30987 | ACCCCGCACAACAAA CCTGCCA TTTCCC CGGCAGG AAGGATCTCTTACAA Paes_1365 1487411 - 1487301 - | hypothetical protein TERM 1636 1487844 - 1487868 + G 76 -10.8 -3.39327 | gap 1 TTCCTGATGGTTCAT CTCCC-CGACA GGGC TGTCGCGGGAG TTGTCAGTCTGAGAA Paes_1366 1487682 - 1488173 + | GCN5-related N-acetyltransferase TERM 1637 1488211 - 1488178 - T 72 -10.4 -2.87931 | opp_overlap 1488180 1488186, overlap 1488186 TCGATCTCTGATACA TAAAAAAACCGCGC ATTGTA GCGCGGTTTTTCTT GTGGTGGGGACAGGA TERM 1638 1488180 - 1488209 + T 80 -10.8 -3.40403 | opp_overlap 1488178 1488186, overlap 1488186 GATCTCTGATACATA AAAAAACCGCGC ATTGTA GCGCGGTTTTTC TTGTGGTGGGGACAG TERM 1639 1488186 - 1488203 + T 100 -9.8 -5.22006 | opp_overlap 1488178 1488186, overlap 1488180 TGATACATAAAAAAA CCGCGC ATTGTA GCGCGG TTTTTCTTGTGGTGG TERM 1640 1488203 - 1488186 - T 100 -9.8 -5.76633 | opp_overlap 1488186 1488180, overlap 1488178 TGATACATAAAAAAA CCGCGC ATTGTA GCGCGG TTTTTCTTGTGGTGG TERM 1641 1488393 - 1488360 - T 72 -10.4 -2.89564 | opp_overlap 1488362 1488368, overlap 1488368 TCGTCATTCGAGACA TAAAAAAACCGCGC ATTGTA GCGCGGTTTTTCTT GTGGTGGGGACAGGA TERM 1642 1488362 - 1488391 + T 80 -10.8 -3.40403 | opp_overlap 1488360 1488368, overlap 1488368 GTCATTCGAGACATA AAAAAACCGCGC ATTGTA GCGCGGTTTTTC TTGTGGTGGGGACAG TERM 1643 1488368 - 1488385 + T 100 -9.8 -5.22006 | opp_overlap 1488368 1488360, overlap 1488362 CGAGACATAAAAAAA CCGCGC ATTGTA GCGCGG TTTTTCTTGTGGTGG TERM 1644 1488385 - 1488368 - T 100 -9.8 -5.76633 | opp_overlap 1488362 1488368, overlap 1488360 CGAGACATAAAAAAA CCGCGC ATTGTA GCGCGG TTTTTCTTGTGGTGG Paes_1367 1490627 - 1488513 - | methionyl-tRNA synthetase TERM 1645 1488749 - 1488761 + g 87 -4.8 -5.30575 | AAACGGTCAGCTTCA GCAG TTTAT CTGC TTTTTTAACTTTTTC TERM 1646 1490047 - 1490036 - G 70 -4.4 -4.56597 | GCTGCTCCTGAAAAA TTCC TAAA GGAA AATACCAGTGCAGAG TERM 1647 1490236 - 1490254 + g 86 -3.9 -5.40072 | opp_overlap 1490236, overlap 1490237 CGCCCGGCCGAAGGA TCGAAAA ATTGC TTTTCGG TTTTTTTGACAAAAA Paes_1368 1491635 - 1490694 - | PSP1 domain protein Paes_1369 1492516 - 1491749 - | phospholipid/glycerol acyltransferase TERM 1648 1492338 - 1492316 - G 79 -4.7 -5.00884 | ATTCTGGGTAAAAAA GGTCTCCGC ACAAA GCTGCGACC AGAACCCGTCCCACC TERM 1649 1492358 - 1492394 + g 80 -11.6 -3.35992 | gap 1, opp_overlap 1492381, overlap 1492358 CCCGTCCCACCAGTA G-GCGTGGTTCCCGTAA AAAA TAACGGGAACCTCGCGC TTCATTGCGGTCACT TERM 1650 1492358 - 1492393 + g 73 -11.8 -2.61274 | opp_overlap 1492381, overlap 1492358 CCCGTCCCACCAGTA GGCGTGGTTCCCGTAA AAAA TAACGGGAACCTCGCG CTTCATTGCGGTCAC Paes_1370 1493659 - 1492523 - | aminotransferase class I and II TERM 1651 1492761 - 1492745 - G 71 -2.1 -4.90471 | overlap 1492747 AGGGAAAATATAAAA GGCTCCC TCA GGCAGGC TCGCCGTTATACCGG TERM 1652 1493593 - 1493569 - G 83 -6.3 -4.96848 | overlap 1493542 1493572 1493583 1493584 CCTGTGACACAAAAA GAGGAGTCGGA AAA TCCGGCTCTCC GGCTGACAGACTGAC Paes_1371 1494253 - 1493747 - | pantetheine-phosphate adenylyltransferase Paes_1372 1494798 - 1494250 - | Protein of unknown function methylase putative TERM 1653 1494621 - 1494592 - G 74 -9.9 -3.54146 | overlap 1494590 1494596 CTGGTCAACGAAACA GACACGCTGTGCC CCAA GGCTCAGCGCCTC AAAACCCAGCGAACC TERM 1654 1494617 - 1494596 - G 77 -11.5 -3.23456 | overlap 1494592 1494590 TCAACGAAACAGACA CGCTGTGCC CCAA GGCTCAGCG CCTCAAAACCCAGCG Paes_1373 1495725 - 1494814 - | Transketolase domain protein TERM 1655 1495595 - 1495557 - G 70 -3.9 -4.60255 | overlap 1495559 1495562 1495577 ATAATGCCGTAAAAA CATCA-GCCATGCCGAGAG AAC CTC-CGGTATGACCTGAAG CCGCCCGAGTCAGCA Paes_1374 1496459 - 1495812 - | DedA family protein Paes_1375 1497204 - 1496497 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1656 1497282 - 1497241 - R 93 -3 -5.82036 | gap 2, overlap 1497244 AGAATAAATAAAAAA CACCGCCGCTCATTCAGGAT GTTG AGCCTG-ACG-GCAGCGCTG CAAATACATGTACTA Paes_1376 1497759 - 1497352 - | hypothetical protein TERM 1657 1498333 - 1498320 - g 90 -8.1 -4.74453 | CAAGACAGGTAAAAA TCCCG CTGT CGGGA AAAGCAACCCGCGAC Paes_1377 1497914 - 1498891 + | Endonuclease/exonuclease/phosphatase Paes_1378 1499065 - 1501221 + | V-type H(+)-translocating pyrophosphatase TERM 1658 1501273 - 1501235 - f 89 -14.1 -3.09289 | gap 1, opp_overlap 1501245, overlap 1501245 GATCACGTCAATACA TCAG-AAAAAAGTCCCGG TTTT CCGGGACTTTTTTTCTGC ACTCGCTCTTCACCC TERM 1659 1501245 - 1501262 + F 100 -12.7 -5.626 | opp_overlap 1501245 1501235 ATACATCAGAAAAAA GTCCCGG TTTT CCGGGAC TTTTTTTCTGCACTC TERM 1660 1501262 - 1501245 - f 100 -12.7 -5.35459 | opp_overlap 1501245, overlap 1501235 ATACATCAGAAAAAA GTCCCGG TTTT CCGGGAC TTTTTTTCTGCACTC Paes_1379 1501420 - 1501998 + | Aminoacyl-tRNA hydrolase Paes_1380 1502807 - 1502001 - | alpha/beta hydrolase fold Paes_1381 1503384 - 1502839 - | tRNA/rRNA methyltransferase (SpoU) Paes_1382 1504454 - 1503381 - | histidinol-phosphate aminotransferase TERM 1661 1504619 - 1504605 - H 80 -4.3 -5.2166 | opp_overlap 1504582 TAATAACTTAAAAAA GGATT TAAAT AATCC GGTTTAGATCGATTT Paes_1383 1504665 - 1505087 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1662 1505114 - 1505147 + F 100 -16.3 -4.77036 | gap 1, opp_overlap 1505119, overlap 1505119 TTGTCATTATTTCAA CAAAAGGCCG-TTTCA ACC TGAAAACGGCCTTTTG TTTTTACTCGTGAGG TERM 1663 1505119 - 1505142 + F 100 -10.4 -5.3104 | gap 1, opp_overlap 1505119, overlap 1505114 ATTATTTCAACAAAA GGCCG-TTTCA ACC TGAAAACGGCC TTTTGTTTTTACTCG TERM 1664 1505142 - 1505119 - f 91 -10.4 -4.66318 | gap 1, opp_overlap 1505114 1505119 ATTATTTCAACAAAA GGCCG-TTTCA ACC TGAAAACGGCC TTTTGTTTTTACTCG TERM 1665 1506107 - 1506086 - g 71 -2.9 -4.81249 | gap 1, overlap 1506078 1506088 GCCCAAACGCAAAAA CTGCGC-GCC TAT GGCTGGACAG GCACACTCACATCAC Paes_1384 1505210 - 1506199 + | ADP-L-glycero-D-manno-heptose-6-epimerase TERM 1666 1506311 - 1506301 - g 100 -3.2 -5.60864 | overlap 1506290 CACACATCAAAAAAA TCCG GGC CGAA TTTCCTGATGTTTCC TERM 1667 1506425 - 1506393 - g 85 -11.4 -3.61715 | CAGGTGCTGCAACAA CTGTTGGGGGAAAT GGTCA ATCTCGCCCAACAG CATGGCGAAGTACTC Paes_1385 1506219 - 1507181 + | PhoH family protein Paes_1386 1508207 - 1507230 - | protein of unknown function DUF1568 TERM 1668 1508127 - 1508104 - G 70 -4.6 -4.52857 | overlap 1508107 AGCCGCGAGATAAAA TATGAACGAT CCTC ATCGTCCGTA ACAATGTTGTTACCA TERM 1669 1508487 - 1508473 - g 72 -5.7 -4.45083 | overlap 1508478 GGGACATGGAGAAAA CAGGA GGTTA TCCTG GAAACCGAGGGGCAG Paes_1387 1508398 - 1508766 + | hypothetical protein Paes_1388 1509003 - 1509191 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1670 1509246 - 1509285 + F 86 -13.9 -2.77899 | gap 2, overlap 1509243 ACTCAACTGTCTCCA CGCCTCCGGATTTTCAAAC ATCA GTTT-A-AATCCGGAGGCG TCATTAATGGCCACG Paes_1389 1509414 - 1509599 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1671 1509622 - 1509653 + F 100 -21.8 -4.08767 | opp_overlap 1509622 1509627, overlap 1509627 TCGATACCCTATAGA TAAAAGCGGCCTGC TGCA GCAGGCCGCTTTTA TTTTACCCCCCTGCC TERM 1672 1509653 - 1509622 - f 100 -21.8 -2.90763 | opp_overlap 1509622 1509627, overlap 1509627 TCGATACCCTATAGA TAAAAGCGGCCTGC TGCA GCAGGCCGCTTTTA TTTTACCCCCCTGCC TERM 1673 1509627 - 1509648 + F 100 -17.3 -5.07652 | opp_overlap 1509622 1509627, overlap 1509622 ACCCTATAGATAAAA GCGGCCTGC TGCA GCAGGCCGC TTTTATTTTACCCCC TERM 1674 1509648 - 1509627 - f 100 -17.3 -4.61199 | opp_overlap 1509627 1509622, overlap 1509622 ACCCTATAGATAAAA GCGGCCTGC TGCA GCAGGCCGC TTTTATTTTACCCCC TERM 1675 1510053 - 1510068 + G 71 -3.2 -4.86731 | overlap 1510048 1510054 AACCCGTCACCTGGA TTCCGG TCAT CTGGAG TTTTCTTTGCGGAGC Paes_1390 1509884 - 1510888 + | bacteriochlorophyll/chlorophyll synthetase Paes_1391 1510893 - 1511522 + | glycosyl transferase family 2 TERM 1676 1511739 - 1511757 + G 72 -8.8 -3.85698 | opp_overlap 1511727, overlap 1511740 GAACGGAGGCAACGT CCGCGGAA TCA TTCCGCGC TTTCTGGAAGAAAAA TERM 1677 1511740 - 1511756 + G 78 -12.3 -2.91276 | opp_overlap 1511727, overlap 1511739 AACGGAGGCAACGTC CGCGGAA TCA TTCCGCG CTTTCTGGAAGAAAA Paes_1392 1511557 - 1512090 + | hypothetical protein TERM 1678 1512207 - 1512191 - f 77 -2.1 -5.40072 | GTCGTCTTAAAAAAA CAGTCCG AAA CAGTCCG CACAATGACACCCTC Paes_1393 1512229 - 1512675 + | protein tyrosine phosphatase TERM 1679 1512739 - 1512719 - T 100 -12.6 -5.81412 | TCCATGCAAAAAAAA GCCGCCAT TGACC ATGGCGGC AATACTGGCGCTTCC Paes_1394 1513761 - 1512757 - | peptide methionine sulfoxide reductase TERM 1680 1513229 - 1513252 + g 72 -7.4 -3.88787 | opp_overlap 1513229 CCCCCTGCAAAAATC GCTTTCTCAG AAAC CTGAGCAGGC TTTATCGCCCTGTCA TERM 1681 1513729 - 1513717 - G 70 -4.1 -4.63479 | GATGATAAACGAAAA CATGC TAC ACATG ACCATGACCAGCACT TERM 1682 1515571 - 1515594 + G 74 -2.4 -5.09895 | ACGTCAGTGTGAGCA CTTCTATGAT GACG AACATGGAGG TTTTTTCAATGCCTC TERM 1683 1516098 - 1516079 - g 73 -11.4 -2.56914 | overlap 1516075 GAGGTGACGAACCTA CTCCGGCC ATCG GGCCGAAG TGCAGGCAAAAAAAG Paes_1395 1513955 - 1516117 + | protein of unknown function DUF255 TERM 1684 1516124 - 1516113 - T 93 -5.8 -5.47218 | GTGCAGGCAAAAAAA GCTG AGAA CAGC GATTCAGGCACTCTC Paes_1396 1516403 - 1516128 - | hypothetical protein Paes_1397 1517097 - 1516654 - | hypothetical protein TERM 1685 1516806 - 1516791 - G 73 -4 -4.82901 | gap 1, opp_overlap 1516792 1516793, overlap 1516792 1516793 CCCTGTTGACAAAAA GCGTCCT GTC AGGAC-C TTTTGATTGAAGCTC Paes_1398 1518680 - 1517253 - | RND efflux system, outer membrane lipoprotein, NodT family Paes_1399 1521889 - 1518722 - | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TERM 1686 1520424 - 1520410 - G 71 -3.4 -4.83615 | overlap 1520411 1520419 CATTCGTCAGAAAAA GGGCAC AGA GCGCCG GACTGAGCGTCAGGG TERM 1687 1520614 - 1520624 + g 72 -8.2 -3.7212 | GCGTCGCTTTACGTG CCGG AAG CCGG TTGTGTTCCATCTTT TERM 1688 1520773 - 1520757 - G 100 -6.5 -5.72622 | GTCATAAAGAAAAAA GTGCCGA TAA TCGCCAC GGGAACTGCAAGCGC Paes_1400 1523092 - 1521893 - | efflux transporter, RND family, MFP subunit TERM 1689 1522169 - 1522129 - G 75 -4.8 -4.82901 | gap 2 CCTTGCTCACAAAAA TCCTGTCCTGCAGATCCGAC GTT GCCG-A-CTGCGGAACAAGA ATGATATCGTCATAC Paes_1401 1524076 - 1523234 - | transcriptional regulator, AraC family Paes_1402 1527171 - 1524079 - | acriflavin resistance protein TERM 1690 1525822 - 1525801 - G 71 -2.1 -5.00267 | overlap 1525803 AATGACAAAAACAAA CTTGCCGAG AATA CCGGGCATG AAAAACATGGGGGCA TERM 1691 1525919 - 1525893 - G 77 -5.9 -4.64766 | gap 1 TGTAGACCTTAAAAA CACC-GTTGACG ACTG CATCAACCGGCG AATCCCCCTGTTCAC TERM 1692 1526842 - 1526832 - G 93 -8.2 -4.87626 | opp_overlap 1526831 1526832 CGGTAATACGAAAAA CCGC TTC GCGG ATTTCACGTTTCACC TERM 1693 1527310 - 1527289 - R 83 -12.3 -3.03441 | overlap 1527308 1527309 CATTACCCGGCAACA GCGTCTCGC ATTC GCGAAACGC ACGGGTCAGCGCAGC Paes_1403 1528952 - 1527432 - | Outer membrane protein-like protein TERM 1694 1528503 - 1528492 - G 71 -3 -4.82901 | overlap 1528495 CTGTTCTCATAAAAA GTAT CCGG ATAC GAAAAAAGCGGGATC TERM 1695 1528888 - 1528877 - G 100 -2.2 -6.17268 | TCAGAAGAAAAAAAA CCAG GTCC CTGA GCAACCGTCCGGAGT Paes_1404 1529631 - 1529020 - | Abortive infection protein Paes_1405 1529728 - 1530309 + | pentapeptide repeat protein Paes_1406 1530631 - 1530347 - | hypothetical protein Paes_1407 1531914 - 1530718 - | geranylgeranyl reductase TERM 1696 1532734 - 1532712 - g 88 -12 -3.78015 | AATCAAAAAGGAGAA GAGCCGGGAT TCC ATACCGGCTC GAAAGAGATGGGCTC Paes_1408 1532115 - 1533098 + | ferrochelatase TERM 1697 1533672 - 1533658 - g 70 -5.7 -4.40561 | TGCGGTCAAAAAGAA TCGAG AACTG CTCGA TGGGCGTTGGGATAA Paes_1409 1533311 - 1534594 + | transposase IS116/IS110/IS902 family protein Paes_1411 1535799 - 1534921 - | Methyltransferase type 11 Paes_1410 1534734 - 1534988 + | hypothetical protein TERM 1698 1536031 - 1536019 - TR 75 -9.1 -3.67597 | overlap 1536028 GCTTGCATCGAATAA GGGGT AGA ACCCC CCCACGCCTGTGGGG TERM 1699 1536049 - 1536028 - TR 76 -10.1 -3.34947 | overlap 1536019 GAATAAGGGGTAGAA CCCCCCCAC GCCT GTGGGGAAG ACTCCTTCCGGCGTG TERM 1700 1536110 - 1536089 - TR 76 -10.1 -3.30441 | overlap 1536070 CAGGATGGGTGAGAA CCCCCCCAC GCCT GTGGGGAAG ACTGTGGATCTTGCT TERM 1701 1536171 - 1536150 - TR 71 -7.9 -3.85698 | overlap 1536152 1536153 GCTTCGGGGTAGAAA CACCCCCAC GCCT GTGGGGAAG ACTCGACAAGCGCTA TERM 1702 1536169 - 1536152 - TR 73 -9.1 -3.51934 | overlap 1536150 1536153 TTCGGGGTAGAAACA CCCCCAC GCCT GTGGGGA AGACTCGACAAGCGC TERM 1703 1536168 - 1536153 - TR 71 -10.4 -2.70946 | overlap 1536152 1536150 TCGGGGTAGAAACAC CCCCAC GCCT GTGGGG AAGACTCGACAAGCG TERM 1704 1536230 - 1536213 - TR 71 -9.1 -3.34398 | overlap 1536196 1536194 1536211 1536214 GGGGGCTTGGAAACA CCCCCAC GCCT GTGGGGA AGACAATCGCACTGA TERM 1705 1536229 - 1536214 - TR 70 -10.4 -2.60496 | overlap 1536196 1536194 1536213 1536211 GGGGCTTGGAAACAC CCCCAC GCCT GTGGGG AAGACAATCGCACTG TERM 1706 1536293 - 1536272 - TR 71 -7.9 -3.72576 | overlap 1536274 1536275 GGTCTTTTGAGGAAA CACCCCCAC GCCT GTGGGGAAG ACAGAAAACCCGGCC TERM 1707 1536291 - 1536274 - TR 73 -9.1 -3.44848 | overlap 1536272 1536275 TCTTTTGAGGAAACA CCCCCAC GCCT GTGGGGA AGACAGAAAACCCGG TERM 1708 1536290 - 1536275 - TR 70 -10.4 -2.66695 | overlap 1536274 1536272 CTTTTGAGGAAACAC CCCCAC GCCT GTGGGG AAGACAGAAAACCCG TERM 1709 1536354 - 1536333 - TR 74 -7.9 -4.10331 | overlap 1536326 1536335 1536336 CGAATCAAGGAGAAA CACCCCCAC GCCT GTGGGGAAG ACGACGCGGCTTGCC TERM 1710 1536352 - 1536335 - TR 75 -9.1 -3.63843 | overlap 1536326 1536333 1536336 AATCAAGGAGAAACA CCCCCAC GCCT GTGGGGA AGACGACGCGGCTTG TERM 1711 1536351 - 1536336 - TR 71 -10.4 -2.77222 | overlap 1536326 1536335 1536333 ATCAAGGAGAAACAC CCCCAC GCCT GTGGGG AAGACGACGCGGCTT TERM 1712 1536415 - 1536394 - TR 72 -7.9 -3.97368 | overlap 1536396 1536397 GGGCGAAGGCAGAAA CACCCCCAC GCCT GTGGGGAAG ACGGAAATAGAGACC TERM 1713 1536413 - 1536396 - TR 75 -9.1 -3.57808 | overlap 1536394 1536397 GCGAAGGCAGAAACA CCCCCAC GCCT GTGGGGA AGACGGAAATAGAGA TERM 1714 1536412 - 1536397 - TR 71 -10.4 -2.74203 | overlap 1536396 1536394 CGAAGGCAGAAACAC CCCCAC GCCT GTGGGG AAGACGGAAATAGAG TERM 1715 1536474 - 1536457 - TR 71 -9.1 -3.38046 | overlap 1536455 1536458 CGCGCACTGGAAACA CCCCCAC GCCT GTGGGGA AGACAGGGCAAGAAT TERM 1716 1536473 - 1536458 - TR 70 -10.4 -2.62613 | overlap 1536457 1536455 GCGCACTGGAAACAC CCCCAC GCCT GTGGGG AAGACAGGGCAAGAA TERM 1717 1536535 - 1536518 - TR 71 -9.1 -3.34398 | overlap 1536516 1536519 GGCCGCTGGGAAACA CCCCCAC GCCT GTGGGGA AGACGTGAGCTACGC TERM 1718 1536534 - 1536519 - TR 70 -10.4 -2.60496 | overlap 1536518 1536516 GCCGCTGGGAAACAC CCCCAC GCCT GTGGGG AAGACGTGAGCTACG TERM 1719 1536598 - 1536577 - TR 71 -7.9 -3.76224 | overlap 1536579 1536580 CGCTCACGCAGGAAA CACCCCCAC GCCT GTGGGGAAG ACTTGGCCCACTGCT TERM 1720 1536596 - 1536579 - TR 73 -9.1 -3.46647 | overlap 1536577 1536580 CTCACGCAGGAAACA CCCCCAC GCCT GTGGGGA AGACTTGGCCCACTG TERM 1721 1536595 - 1536580 - TR 70 -10.4 -2.67667 | overlap 1536579 1536577 TCACGCAGGAAACAC CCCCAC GCCT GTGGGG AAGACTTGGCCCACT TERM 1722 1536657 - 1536640 - TR 71 -9.1 -3.35775 | overlap 1536638 1536641 ACGATGCCGGAAACA CCCCCAC GCCT GTGGGGA AGACCTTGCAGTCAA TERM 1723 1536656 - 1536641 - TR 70 -10.4 -2.61144 | overlap 1536640 1536638 CGATGCCGGAAACAC CCCCAC GCCT GTGGGG AAGACCTTGCAGTCA TERM 1724 1536720 - 1536699 - TR 72 -7.9 -3.92075 | overlap 1536701 1536702 ACTCTCATTGAGAAA CACCCCCAC GCAT GTGGGGAAG ACTCCCCTCCAGCGC TERM 1725 1536718 - 1536701 - TR 73 -9.1 -3.5511 | overlap 1536699 1536702 TCTCATTGAGAAACA CCCCCAC GCAT GTGGGGA AGACTCCCCTCCAGC TERM 1726 1536717 - 1536702 - TR 71 -10.4 -2.72745 | overlap 1536701 1536699 CTCATTGAGAAACAC CCCCAC GCAT GTGGGG AAGACTCCCCTCCAG TERM 1727 1536779 - 1536762 - TR 71 -9.1 -3.38046 | overlap 1536760 1536763 CCGCTACCGGAAACA CCCCCAC GCCT GTGGGGA AGACGGAGTAGACTG TERM 1728 1536778 - 1536763 - TR 70 -10.4 -2.62613 | overlap 1536762 1536760 CGCTACCGGAAACAC CCCCAC GCCT GTGGGG AAGACGGAGTAGACT TERM 1729 1536842 - 1536821 - TR 74 -7.9 -4.06384 | overlap 1536823 1536824 CCTCAACAGTAGAAA CACCCCCAC GCCT GTGGGGAAG ACCTGCTACCAAGTT TERM 1730 1536840 - 1536823 - TR 75 -9.1 -3.62291 | overlap 1536821 1536824 TCAACAGTAGAAACA CCCCCAC GCCT GTGGGGA AGACCTGCTACCAAG TERM 1731 1536839 - 1536824 - TR 71 -10.4 -2.76651 | overlap 1536823 1536821 CAACAGTAGAAACAC CCCCAC GCCT GTGGGG AAGACCTGCTACCAA TERM 1732 1536903 - 1536882 - TR 72 -7.9 -3.98172 | overlap 1536884 1536885 AGTAATATTTAGAAA CACCCCCAC GCCT GTGGGGAAG ACATGGGCTGAATAC TERM 1733 1536901 - 1536884 - TR 75 -9.1 -3.57639 | overlap 1536882 1536885 TAATATTTAGAAACA CCCCCAC GCCT GTGGGGA AGACATGGGCTGAAT TERM 1734 1536900 - 1536885 - TR 71 -10.4 -2.7386 | overlap 1536884 1536882 AATATTTAGAAACAC CCCCAC GCCT GTGGGG AAGACATGGGCTGAA TERM 1735 1536964 - 1536943 - TR 71 -7.9 -3.85698 | overlap 1536945 1536946 GCGGTCGGGCAGAAA CACCCCCAC GCCT GTGGGGAAG ACGATGCTTCGGCGC TERM 1736 1536962 - 1536945 - TR 73 -9.1 -3.51934 | overlap 1536943 1536946 GGTCGGGCAGAAACA CCCCCAC GCCT GTGGGGA AGACGATGCTTCGGC TERM 1737 1536961 - 1536946 - TR 71 -10.4 -2.70946 | overlap 1536945 1536943 GTCGGGCAGAAACAC CCCCAC GCCT GTGGGG AAGACGATGCTTCGG TERM 1738 1537030 - 1536999 - TR 76 -8.6 -3.8766 | overlap 1537004 1537006 1537007 GGAGACGACAGGAAA GGAAACACCCCCAC GCCT GTGGGGAAGACTCC AGAAACCTCTCATAC TERM 1739 1537025 - 1537004 - TR 74 -7.9 -4.12738 | overlap 1536999 1537006 1537007 CGACAGGAAAGGAAA CACCCCCAC GCCT GTGGGGAAG ACTCCAGAAACCTCT TERM 1740 1537023 - 1537006 - TR 75 -9.1 -3.65143 | overlap 1537004 1536999 1537007 ACAGGAAAGGAAACA CCCCCAC GCCT GTGGGGA AGACTCCAGAAACCT TERM 1741 1537022 - 1537007 - TR 71 -10.4 -2.78002 | overlap 1537006 1537004 1536999 CAGGAAAGGAAACAC CCCCAC GCCT GTGGGG AAGACTCCAGAAACC TERM 1742 1537084 - 1537067 - TR 71 -9.1 -3.34398 | opp_overlap 1537082, overlap 1537065 1537068 GCCCTCTTGGAAACA CCCCCAC GCCT GTGGGGA AGACTCTGTCTTACT TERM 1743 1537083 - 1537068 - TR 70 -10.4 -2.60496 | opp_overlap 1537082, overlap 1537067 1537065 CCCTCTTGGAAACAC CCCCAC GCCT GTGGGG AAGACTCTGTCTTAC TERM 1744 1537147 - 1537126 - TR 79 -7.9 -4.35483 | overlap 1537128 1537129 GTCGAGGAGAAGAAA CACCCCCAC GCCT GTGGGGAAG ACCCGCAGCAGATCT TERM 1745 1537145 - 1537128 - TR 77 -9.1 -3.78004 | overlap 1537126 1537129 CGAGGAGAAGAAACA CCCCCAC GCCT GTGGGGA AGACCCGCAGCAGAT TERM 1746 1537144 - 1537129 - TR 72 -10.4 -2.86079 | overlap 1537128 1537126 GAGGAGAAGAAACAC CCCCAC GCCT GTGGGG AAGACCCGCAGCAGA TERM 1747 1537206 - 1537189 - TR 71 -9.1 -3.38046 | overlap 1537187 1537190 TGTCGAGTGGAAACA CCCCCAC GCCT GTGGGGA AGACGGCGGATGATG TERM 1748 1537205 - 1537190 - TR 70 -10.4 -2.62613 | overlap 1537189 1537187 GTCGAGTGGAAACAC CCCCAC GCCT GTGGGG AAGACGGCGGATGAT TERM 1749 1537267 - 1537250 - TR 71 -9.1 -3.34398 | overlap 1537248 1537251 CCTGTGTCGGAAACA CCCCCAC GCCT GTGGGGA AGACGATACAATCAA TERM 1750 1537266 - 1537251 - TR 70 -10.4 -2.60496 | overlap 1537250 1537248 CTGTGTCGGAAACAC CCCCAC GCCT GTGGGG AAGACGATACAATCA TERM 1751 1537330 - 1537309 - TR 71 -7.9 -3.71649 | overlap 1537311 1537312 TCCTCAAACTGGAAA CACCCCCAC GCCT GTGGGGAAG ACCGAAGCGTTCGCT TERM 1752 1537328 - 1537311 - TR 73 -9.1 -3.43919 | overlap 1537309 1537312 CTCAAACTGGAAACA CCCCCAC GCCT GTGGGGA AGACCGAAGCGTTCG TERM 1753 1537327 - 1537312 - TR 70 -10.4 -2.6587 | overlap 1537311 1537309 TCAAACTGGAAACAC CCCCAC GCCT GTGGGG AAGACCGAAGCGTTC TERM 1754 1537389 - 1537372 - TR 71 -9.1 -3.41302 | overlap 1537370 1537373 CGAATACTTGAAACA CCCCCAC GCCT GTGGGGA AGACCGTAAATCCTT TERM 1755 1537388 - 1537373 - TR 70 -10.4 -2.64299 | overlap 1537372 1537370 GAATACTTGAAACAC CCCCAC GCCT GTGGGG AAGACCGTAAATCCT TERM 1756 1537450 - 1537433 - TR 71 -9.1 -3.35046 | overlap 1537431 1537434 TGAGCGGTGGAAACA CCCCCAC GCCT GTGGGGA AGACGATCTATTACT TERM 1757 1537449 - 1537434 - TR 70 -10.4 -2.60813 | overlap 1537433 1537431 GAGCGGTGGAAACAC CCCCAC GCCT GTGGGG AAGACGATCTATTAC TERM 1758 1537511 - 1537494 - TR 71 -9.1 -3.34398 | opp_overlap 1537509, overlap 1537492 1537495 GCCGGTCTGGAAACA CCCCCAC GCCT GTGGGGA AGACAATTCCTTTAT TERM 1759 1537510 - 1537495 - TR 70 -10.4 -2.60496 | opp_overlap 1537509, overlap 1537494 1537492 CCGGTCTGGAAACAC CCCCAC GCCT GTGGGG AAGACAATTCCTTTA TERM 1760 1537572 - 1537555 - TR 71 -9.1 -3.35775 | overlap 1537553 1537556 ACGATGCCGGAAACA CCCCCAC GCCT GTGGGGA AGACCGAATATCTGG TERM 1761 1537571 - 1537556 - TR 70 -10.4 -2.61144 | overlap 1537555 1537553 CGATGCCGGAAACAC CCCCAC GCCT GTGGGG AAGACCGAATATCTG TERM 1762 1537633 - 1537616 - TR 71 -9.1 -3.34715 | opp_overlap 1537607, overlap 1537596 1537592 1537614 1537617 GATTCTGCGGAAACA CCCCCAC GCCT GTGGGGA AGACTCTGCTTATCG TERM 1763 1537632 - 1537617 - TR 70 -10.4 -2.60615 | opp_overlap 1537607, overlap 1537596 1537592 1537616 1537614 ATTCTGCGGAAACAC CCCCAC GCCT GTGGGG AAGACTCTGCTTATC TERM 1764 1537696 - 1537675 - TR 71 -7.9 -3.73224 | overlap 1537677 1537678 TTACTTTTGAGGAAA CACCCCCAC GCCT GTGGGGAAG ACATCTGGTACAGGG TERM 1765 1537694 - 1537677 - TR 73 -9.1 -3.45027 | overlap 1537675 1537678 ACTTTTGAGGAAACA CCCCCAC GCCT GTGGGGA AGACATCTGGTACAG TERM 1766 1537693 - 1537678 - TR 70 -10.4 -2.66695 | overlap 1537677 1537675 CTTTTGAGGAAACAC CCCCAC GCCT GTGGGG AAGACATCTGGTACA TERM 1767 1537757 - 1537736 - TR 71 -7.9 -3.79251 | overlap 1537738 1537739 GAGGGCATGAGGAAA CACCCCCAC GCCT GTGGGGAAG ACTTCCGGCAGTAGT TERM 1768 1537755 - 1537738 - TR 73 -9.1 -3.48024 | overlap 1537736 1537739 GGGCATGAGGAAACA CCCCCAC GCCT GTGGGGA AGACTTCCGGCAGTA TERM 1769 1537754 - 1537739 - TR 70 -10.4 -2.68493 | overlap 1537738 1537736 GGCATGAGGAAACAC CCCCAC GCCT GTGGGG AAGACTTCCGGCAGT TERM 1770 1537818 - 1537797 - TR 72 -7.9 -3.89346 | opp_overlap 1537797 1537796, overlap 1537799 1537800 CCCGTACTGTAGAAA CACCCCCAC GCCT GTGGGGAAG ACTTTTTATATGGAG TERM 1771 1537816 - 1537799 - TR 73 -9.1 -3.53733 | opp_overlap 1537797 1537796, overlap 1537797 1537800 CGTACTGTAGAAACA CCCCCAC GCCT GTGGGGA AGACTTTTTATATGG TERM 1772 1537815 - 1537800 - TR 71 -10.4 -2.71918 | opp_overlap 1537797 1537796, overlap 1537799 1537797 GTACTGTAGAAACAC CCCCAC GCCT GTGGGG AAGACTTTTTATATG TERM 1773 1537879 - 1537858 - TR 71 -7.9 -3.80625 | overlap 1537860 1537861 GCTGCAGAAGGGAAA CACCCCCAC GCCT GTGGGGAAG ACGCATTCTTTCCTG TERM 1774 1537877 - 1537860 - TR 73 -9.1 -3.48766 | overlap 1537858 1537861 TGCAGAAGGGAAACA CCCCCAC GCCT GTGGGGA AGACGCATTCTTTCC TERM 1775 1537876 - 1537861 - TR 70 -10.4 -2.68778 | overlap 1537860 1537858 GCAGAAGGGAAACAC CCCCAC GCCT GTGGGG AAGACGCATTCTTTC TERM 1776 1537940 - 1537919 - TR 72 -7.9 -3.91412 | overlap 1537910 1537921 1537922 AGCACAGCGTAGAAA CACCCCCAC GCCT GTGGGGAAG ACACGCTAAAGGTAA TERM 1777 1537938 - 1537921 - TR 73 -9.1 -3.54447 | overlap 1537910 1537919 1537922 CACAGCGTAGAAACA CCCCCAC GCCT GTGGGGA AGACACGCTAAAGGT TERM 1778 1537937 - 1537922 - TR 71 -10.4 -2.72186 | overlap 1537910 1537921 1537919 ACAGCGTAGAAACAC CCCCAC GCCT GTGGGG AAGACACGCTAAAGG TERM 1779 1538001 - 1537980 - TR 71 -7.9 -3.73775 | overlap 1537982 1537983 CGGAGGGTCAGGAAA CACCCCCAC GCCT GTGGGGAAG ACGGTGTCGGCGCAT TERM 1780 1537999 - 1537982 - TR 73 -9.1 -3.45324 | overlap 1537980 1537983 GAGGGTCAGGAAACA CCCCCAC GCCT GTGGGGA AGACGGTGTCGGCGC TERM 1781 1537998 - 1537983 - TR 70 -10.4 -2.66873 | overlap 1537982 1537980 AGGGTCAGGAAACAC CCCCAC GCCT GTGGGG AAGACGGTGTCGGCG TERM 1782 1538062 - 1538041 - TR 74 -7.9 -4.06562 | overlap 1538043 1538044 AACTTGAAGCAGAAA CACCCCCAC GCCT GTGGGGAAG ACGCGTCCTGAGATC TERM 1783 1538060 - 1538043 - TR 75 -9.1 -3.6217 | overlap 1538041 1538044 CTTGAAGCAGAAACA CCCCCAC GCCT GTGGGGA AGACGCGTCCTGAGA TERM 1784 1538059 - 1538044 - TR 71 -10.4 -2.7682 | overlap 1538043 1538041 TTGAAGCAGAAACAC CCCCAC GCCT GTGGGG AAGACGCGTCCTGAG TERM 1785 1538123 - 1538102 - TR 71 -7.9 -3.72893 | overlap 1538104 1538105 CAGCGCCTCAGGAAA CACCCCCAC GCCT GTGGGGAAG ACAACCTTCTCCCCA TERM 1786 1538121 - 1538104 - TR 73 -9.1 -3.44848 | overlap 1538102 1538105 GCGCCTCAGGAAACA CCCCCAC GCCT GTGGGGA AGACAACCTTCTCCC TERM 1787 1538120 - 1538105 - TR 70 -10.4 -2.66695 | overlap 1538104 1538102 CGCCTCAGGAAACAC CCCCAC GCCT GTGGGG AAGACAACCTTCTCC TERM 1788 1538184 - 1538163 - TR 72 -7.9 -3.99898 | opp_overlap 1538162, overlap 1538165 1538166 TAAGCAATCGAGAAA CACCCCCAC GCCT GTGGGGAAG ACTTGGTAGTAGTGA TERM 1789 1538182 - 1538165 - TR 75 -9.1 -3.58209 | opp_overlap 1538162, overlap 1538163 1538166 AGCAATCGAGAAACA CCCCCAC GCCT GTGGGGA AGACTTGGTAGTAGT TERM 1790 1538181 - 1538166 - TR 71 -10.4 -2.74203 | opp_overlap 1538162, overlap 1538165 1538163 GCAATCGAGAAACAC CCCCAC GCCT GTGGGG AAGACTTGGTAGTAG TERM 1791 1538243 - 1538226 - TR 71 -9.1 -3.41836 | opp_overlap 1538218, overlap 1538224 1538227 AGATGTATGGAAACA CCCCCAC GCCT GTGGGGA AGACTTCCATCATTC TERM 1792 1538242 - 1538227 - TR 70 -10.4 -2.6462 | opp_overlap 1538218, overlap 1538226 1538224 GATGTATGGAAACAC CCCCAC GCCT GTGGGG AAGACTTCCATCATT TERM 1793 1538306 - 1538285 - TR 79 -7.9 -4.32649 | overlap 1538287 1538288 ATTTTAAAAAGGAAA CACCCCCAC GCCT GTGGGGAAG ACACTGGAATTTACA TERM 1794 1538304 - 1538287 - TR 77 -9.1 -3.7557 | overlap 1538285 1538288 TTTAAAAAGGAAACA CCCCCAC GCCT GTGGGGA AGACACTGGAATTTA TERM 1795 1538303 - 1538288 - TR 72 -10.4 -2.84257 | overlap 1538287 1538285 TTAAAAAGGAAACAC CCCCAC GCCT GTGGGG AAGACACTGGAATTT Paes_1412 1538645 - 1538340 - | CRISPR-associated protein Cas2 Paes_1413 1539523 - 1538648 - | CRISPR-associated protein Cas1 TERM 1796 1539442 - 1539468 + g 81 -5.8 -4.82901 | overlap 1539439 1539459 ACGGGTATTTATCCT TCACCTGCGGTA AGG TGTCTCGGGTGA TTTTTATCAGCAACC Paes_1414 1540244 - 1539513 - | CRISPR-associated protein Cas5 family TERM 1797 1540031 - 1540072 + g 71 -2.3 -5.00884 | CCTGTCTGAATTTAC TGGTTCTGCAAAAGGAG ATGGCTGA CTGTTTTAGCGGAGCCA TTTTTTCAAGAAGCT Paes_1415 1541284 - 1540241 - | CRISPR-associated protein, Cse4 family TERM 1798 1541247 - 1541270 + g 72 -6 -4.36554 | opp_overlap 1541236 1541251 TGAAGAATATGATAT TCAATTCGGG TGTT CCTGAATGGA TTTGTTATGCTCATA Paes_1416 1541923 - 1541297 - | CRISPR-associated protein, Cse3 family Paes_1417 1542453 - 1541920 - | CRISPR-associated protein, Cse2 family Paes_1418 1544016 - 1542457 - | CRISPR-associated protein, Cse1 family Paes_1419 1546619 - 1544037 - | CRISPR-associated helicase Cas3 TERM 1799 1544290 - 1544300 + g 88 -5.4 -5.31545 | AGAGATGCTGCAAGT GAAC GTT GTTC TTTTTTACTCTTCTT TERM 1800 1544547 - 1544564 + g 72 -9.9 -3.30038 | CTTCGCTTTATACTT GAGCATC ATAG GATGCTC TTCAATTTCCATATA Paes_1420 1547182 - 1546640 - | DNA-directed DNA polymerase TERM 1801 1546861 - 1546848 - G 77 -3.1 -5.04385 | GATAGTCCCAAAAAA CGCAA TTCA TTACG TATAAACGAAATATC TERM 1802 1547117 - 1547093 - G 76 -12.3 -2.59742 | opp_overlap 1547092 1547089 1547086, overlap 1547092 CGCAACTTCGATAAC TCTATCACCTC TGC GAGGTGATAAA CCTGTTGTTTCGACA Paes_1421 1548146 - 1547172 - | hypothetical protein TERM 1803 1547507 - 1547517 + g 71 -2.4 -4.93365 | opp_overlap 1547497 CGAAATGCTCGGTCA GCAG CTG CAGC TTTTTGATTCTGCCG TERM 1804 1548507 - 1548546 + r 89 -8.4 -4.74504 | opp_overlap 1548521 GAGGGGAATGGAAGT CCGGATGCCCAGAAGGGG CTCC CCTCATCCGGCCATCAGG TTTTTGACTTGCGGT TERM 1805 1549190 - 1549170 - R 90 -4.6 -5.5353 | opp_overlap 1549170 GACATCAATAAAAAA GCCCCGTT TATTG AGCGAGGC TTTTTCGGTACCAGT TERM 1806 1549170 - 1549190 + r 73 -5.3 -4.66163 | opp_overlap 1549170 GACATCAATAAAAAA GCCCCGTTT ATT GAGCGAGGC TTTTTCGGTACCAGT Paes_1422 1549437 - 1549288 - | hypothetical protein Paes_1423 1549787 - 1549497 - | hypothetical protein Paes_1424 1551400 - 1549838 - | Radical SAM domain protein TERM 1807 1550414 - 1550390 - G 70 -6.5 -4.15044 | overlap 1550411 GCTGTTCTGAATAAA CTCGATCTGTT TAG AAAAAATCGAG GGTGTATCGCTGTCG TERM 1808 1550694 - 1550705 + g 72 -4.4 -4.62069 | CATTCGATCAGTTTC GGAA GCAG TTCC TTTTTCAGATACGAC TERM 1809 1550769 - 1550753 - G 79 -2.2 -5.24531 | ATCGTCCACAAAAAA GACGGA GCCTT TCCACC CGGCCTCACGGAGCC Paes_1425 1551615 - 1551448 - | hypothetical protein Paes_1426 1551802 - 1551656 - | hypothetical protein Paes_1427 1552051 - 1551815 - | hypothetical protein TERM 1810 1552164 - 1552203 + H 79 -4.8 -5.09762 | opp_overlap 1552161 AGGGGGAATGGATAT CCGGATGCCCAGAAGATG CTCC CCTCCTCCGGCCATCAGG TTTTTGTCTTCCGGT TERM 1811 1553143 - 1553105 - g 78 -7.7 -4.3255 | overlap 1553108 CTCGGAATCAACAAA TC-AGCCACGATTCAGGAT GCT AT-CTCAATCGTGGCTCGA TGGTGCCAGGAAAAT TERM 1812 1553719 - 1553735 + G 85 -6.7 -4.82901 | TTTGCTGGATCCTCA TATTGAT CTG ATCAATA TTTTTCTGCCAAAAA Paes_1428 1552400 - 1554178 + | hypothetical protein TERM 1813 1554244 - 1554232 - T 74 -3.3 -5.07486 | CATGCGCAAGAAAAA GGTCG AGC CTACC GAACGCAACCTTGTA Paes_1429 1554637 - 1554269 - | response regulator receiver protein Paes_1430 1556915 - 1554702 - | multi-sensor signal transduction histidine kinase TERM 1814 1555895 - 1555885 - G 70 -5.4 -4.37502 | opp_overlap 1555885 ACCAGCACAGGAAAA GATG ACC CATC TTTTTTCAACGCCCT TERM 1815 1555885 - 1555895 + g 80 -5.4 -5.00884 | opp_overlap 1555885 ACCAGCACAGGAAAA GATG ACC CATC TTTTTTCAACGCCCT TERM 1816 1556849 - 1556893 + g 77 -7.2 -4.5442 | gap 1, opp_overlap 1556853, overlap 1556844 1556850 1556853 GAACGACATGTGAGA TCAACGTTCTCATCGTTG-CG CTGT CGTCGGCTATGAGAACGGTGG TTTTCTGATTGGAAA Paes_1431 1557607 - 1556948 - | phosphoribulokinase/uridine kinase TERM 1817 1558499 - 1558542 + r 89 -14.3 -2.9183 | gap 2, opp_overlap 1558511, overlap 1558511 TGAAGGGCTCGAGGG TCTAACAAAAAAGCGGCTCAT GACG ATG-GCCGCTTTTTTGTT-GA TGTGTAAGAATTTTT TERM 1818 1558531 - 1558511 - R 95 -7.6 -5.4505 | gap 1, opp_overlap 1558511 1558499 GGGTCTAACAAAAAA GCGGCTCAT GACG ATG-GCCGC TTTTTTGTTGATGTG TERM 1819 1558511 - 1558531 + r 100 -7.6 -5.5353 | gap 1, opp_overlap 1558511, overlap 1558499 GGGTCTAACAAAAAA GCGGCTCAT GACG ATG-GCCGC TTTTTTGTTGATGTG Paes_1433 1560048 - 1558558 - | inosine-5'-monophosphate dehydrogenase Paes_1434 1561459 - 1560839 - | hypothetical protein TERM 1820 1560872 - 1560910 + g 72 -7.7 -3.89614 | gap 1, opp_overlap 1560881, overlap 1560881 CCTCTCTCTCCGCAG CAAGAAAAAGCTTCCG ACTAACCC CGGGAGCTTTTT-TTG TTTATAGCCCTTCGC TERM 1821 1560902 - 1560881 - G 79 -3.6 -5.1356 | opp_overlap 1560881 1560872 CCGCAGCAAGAAAAA GCTTCCGA CTAACC CCGGGAGC TTTTTTTGTTTATAG TERM 1822 1560881 - 1560902 + g 100 -5.1 -6.02919 | opp_overlap 1560881, overlap 1560872 CCGCAGCAAGAAAAA GCTTCCG ACTAACCC CGGGAGC TTTTTTTGTTTATAG TERM 1823 1561050 - 1561087 + g 100 -17.3 -3.89614 | opp_overlap 1561052 1561058, overlap 1561058 CCTCTCTCTCCGCAA CAGAAAAAGCTTCCG AATAACCA CGGAAGCTTTTTCTG TTTATAGCCCTTCGC TERM 1824 1561085 - 1561052 - G 87 -14.1 -3.01712 | opp_overlap 1561050 1561058, overlap 1561058 TCTCTCTCCGCAACA GAAAAAGCTTCCG AATAACCA CGGAAGCTTTTTC TGTTTATAGCCCTTC TERM 1825 1561079 - 1561058 - G 90 -7.3 -5.0916 | opp_overlap 1561058 1561050, overlap 1561052 TCCGCAACAGAAAAA GCTTCCG AATAACCA CGGAAGC TTTTTCTGTTTATAG TERM 1826 1561058 - 1561079 + g 95 -7.3 -5.24799 | opp_overlap 1561052 1561058, overlap 1561050 TCCGCAACAGAAAAA GCTTCCG AATAACCA CGGAAGC TTTTTCTGTTTATAG TERM 1827 1561227 - 1561264 + g 82 -11.5 -3.55622 | opp_overlap 1561235, overlap 1561235 CCTCTCTCTCCGCAA CAGAAAAAGCTTCCG AATAACCC CGGGAGCTTTTTTTG TTTACAGCCGTTCGC TERM 1828 1561256 - 1561235 - G 81 -4.3 -5.0916 | opp_overlap 1561227 1561235 TCCGCAACAGAAAAA GCTTCCGAA TAAC CCCGGGAGC TTTTTTTGTTTACAG TERM 1829 1561235 - 1561256 + g 100 -5.1 -5.95539 | opp_overlap 1561235, overlap 1561227 TCCGCAACAGAAAAA GCTTCCG AATAACCC CGGGAGC TTTTTTTGTTTACAG TERM 1830 1561404 - 1561441 + g 100 -14.4 -3.55622 | opp_overlap 1561407 1561412, overlap 1561412 CCTCTCTCTCCGCAG CAAGAAAAGCTTCCGA TTAACC TCGGGAGCTTTTTTTG TTTACAGCCGTTCGC TERM 1831 1561433 - 1561412 - G 77 -5.8 -4.71426 | opp_overlap 1561404 1561412, overlap 1561407 TCCGCAGCAAGAAAA GCTTCCGA TTAACC TCGGGAGC TTTTTTTGTTTACAG TERM 1832 1561412 - 1561433 + g 100 -8 -5.95539 | opp_overlap 1561412 1561407, overlap 1561404 TCCGCAGCAAGAAAA GCTTCCGA TTAACC TCGGGAGC TTTTTTTGTTTACAG TERM 1833 1561590 - 1561611 + H 100 -5.1 -5.95539 | opp_overlap 1561590, overlap 1561581 CCGCAGCAAGAAAAA GCTTCCG AATAACCC CGGGAGC TTTTTTTGTTTACAA TERM 1834 1561611 - 1561590 - H 77 -4.3 -5.1356 | opp_overlap 1561590 1561581 CCGCAGCAAGAAAAA GCTTCCGAA TAAC CCCGGGAGC TTTTTTTGTTTACAA TERM 1835 1561759 - 1561797 + H 72 -7.7 -3.89614 | gap 1, opp_overlap 1561768, overlap 1561768 CCTCTCTCTCCGCAG CAAGAAAAAGCTTCCG AATAACCC CGGGAGCTTTTT-TTG TTTATAGCCCTTCGC TERM 1836 1561789 - 1561768 - H 77 -4.3 -5.1356 | opp_overlap 1561759 1561768 CCGCAGCAAGAAAAA GCTTCCGAA TAAC CCCGGGAGC TTTTTTTGTTTATAG TERM 1837 1561768 - 1561789 + H 100 -5.1 -6.02919 | opp_overlap 1561768, overlap 1561759 CCGCAGCAAGAAAAA GCTTCCG AATAACCC CGGGAGC TTTTTTTGTTTATAG TERM 1838 1562579 - 1562558 - g 70 -5.2 -4.41348 | gap 1, overlap 1562559 TGCTCTTCAAAGAAA CCTGTAGAG GAAAA CTCTAC-GG CAAGACCGGTTCCGG Paes_1435 1561972 - 1562760 + | Beta-lactamase TERM 1839 1562755 - 1562785 + T 100 -14 -3.57144 | opp_overlap 1562750, overlap 1562753 AATGCAAAAGGTCTC CTGTAGGGATCTGC TAC GCTGACCCCTACAG TTTGCGAATACAAGA Paes_1436 1566833 - 1563012 - | magnesium chelatase, H subunit TERM 1840 1564427 - 1564415 - G 79 -4.8 -4.88407 | TTATCGAAGCAAAAA CAGC TCCTG GCTG CTGGCGTTCAAAGAG TERM 1841 1566234 - 1566222 - G 71 -9.1 -3.56541 | ATCAGGATGATACAA GCCCA TGT TGGGC ACGTCGACAATCGGG TERM 1842 1566952 - 1566992 + r 87 -13.5 -3.06228 | opp_overlap 1566957, overlap 1566957 TCAAGGACTAAAAAC AAAAACCTCCCTCTGTT CAATGAA AACAGGGGGAGGTTTTG ATTGTTTCTGATAGA TERM 1843 1566957 - 1566987 + r 100 -13.4 -4.64613 | opp_overlap 1566957, overlap 1566952 GACTAAAAACAAAAA CCTCCCTCTGTT CAATGAA AACAGGGGGAGG TTTTGATTGTTTCTG TERM 1844 1566987 - 1566957 - R 100 -11.9 -5.65496 | opp_overlap 1566952 1566957 GACTAAAAACAAAAA CCTCCCTCTGTTC AATGA AAACAGGGGGAGG TTTTGATTGTTTCTG Paes_1437 1568875 - 1567016 - | magnesium chelatase ATPase subunit D TERM 1845 1567447 - 1567435 - G 74 -7.7 -4.08767 | overlap 1567438 GGGACGGCGGCAAAA GAAGC TGC GCTTC CTTCCCCCTGAAGGA Paes_1438 1570030 - 1568879 - | magnesium chelatase ATPase subunit I TERM 1846 1570182 - 1570169 - R 73 -5.3 -4.7254 | overlap 1570174 1570175 ATGCTTTACCAAAAA GGAAA GGAC TTTCC CTGATTTAATTTATC Paes_1439 1571618 - 1570209 - | dihydrolipoamide dehydrogenase TERM 1847 1570618 - 1570631 + g 72 -8.1 -3.86015 | opp_overlap 1570616 1570617 TCAACGGCAATAACG GCCTC GGCG GAGGC TTTATGGGCAAGCTG TERM 1848 1572284 - 1572269 - g 70 -4.6 -4.52949 | GGTTGAAAAAAAATA CCAGGC AATC GTCTGG GGAGTCCCTGAGCCT TERM 1849 1572414 - 1572430 + G 73 -3.7 -4.78149 | overlap 1572416 ACCGAATACCGGGTC CAGCAAA GCC TTTGCTA TTTTTCACTTGTCGA Paes_1440 1571697 - 1572740 + | pseudouridine synthase, RluA family Paes_1441 1572884 - 1573462 + | NADPH-dependent FMN reductase Paes_1442 1573651 - 1574448 + | hypothetical protein Paes_1443 1574617 - 1575666 + | hypothetical protein TERM 1850 1576210 - 1576187 - g 84 -7.4 -4.62336 | overlap 1576189 ATTCTATCGGAAAAA TCGCCCCATC AGAT GATGGGGAAA CAATTGTCTTCTCGG TERM 1851 1576438 - 1576459 + G 80 -5.1 -5.00616 | gap 1, overlap 1576437 CACACCATTGGCACC TC-CCCGGTC AGC GACAGGGAGA TTTTTTCACGAGCGA Paes_1444 1575709 - 1577913 + | Prolyl oligopeptidase TERM 1852 1577972 - 1577947 - g 76 -9 -3.75378 | opp_overlap 1577946 1577945 ATGGTCACAATACAA CACCCTGTTC ACATCA GAACGGGGTG GATCTTTCCTCTATA TERM 1853 1579068 - 1579084 + G 78 -8.7 -4.19678 | opp_overlap 1579063 1579067 1579064 CATTTTTAAACGCAT CCTGCGT CGC ATGCAGG TTTCTTCCGATCTGC Paes_1445 1577924 - 1579330 + | Radical SAM domain protein Paes_1446 1579594 - 1579355 - | hypothetical protein Paes_1447 1581575 - 1579677 - | ABC transporter related TERM 1854 1579877 - 1579903 + g 100 -4.3 -5.77853 | overlap 1579878 CACGCGCCTCTTTAT ACCCCAGCTTA GGCTG TGCGCTGGGGC TTTTTTTTCGCGCTT TERM 1855 1579878 - 1579902 + g 74 -7.8 -4.05085 | overlap 1579877 ACGCGCCTCTTTATA CCCCAGCTTA GGCTG TGCGCTGGGG CTTTTTTTTCGCGCT TERM 1856 1579921 - 1579943 + g 84 -4 -5.25803 | overlap 1579913 TTTTTTCGCGCTTCA GAGGGCTTGG CTG CCGACCGCTC TTTTTTCTGCGGCTT TERM 1857 1580772 - 1580789 + g 79 -4 -5.0538 | opp_overlap 1580768, overlap 1580774 CATCCACTCAAGCTC CTGGCG GACAAG CGCCTG TTTTTTGCGATCCGC TERM 1858 1581536 - 1581524 - G 90 -7.7 -4.79826 | overlap 1581517 ATACATCATTAAAAA GGGTT TTT AACCC GTACTGCTTGCTGAT TERM 1859 1581950 - 1581925 - g 72 -4.7 -4.62069 | gap 1, opp_overlap 1581932 1581947 TGGTCAGCGCAAAAA CTGAC-GGGCTC GAT GAGCTCTATCAG GCTATCAGCATGATT Paes_1448 1581801 - 1582355 + | hypothetical protein Paes_1449 1582969 - 1582379 - | hypothetical protein TERM 1860 1582555 - 1582576 + g 80 -5.1 -4.96501 | opp_overlap 1582530 CAACCGTAATCGCCT GCGAACGCA TCAT TGCTTTTGC TTTCTTTTTCTGGAC TERM 1861 1583257 - 1583245 - H 76 -7.7 -4.21936 | overlap 1583249 CGGACAACTCGAAAA CCAAC GCC GTTGG CCCAGAGGTCCGGAA TERM 1862 1583821 - 1583852 + G 100 -16 -3.29144 | overlap 1583822 GCGACGCATCCGACA TTGTAGGGGCGAAA AATT TTTCGCCCCTACGG TTATCGAAACCATGC TERM 1863 1583822 - 1583851 + G 100 -17.3 -2.57344 | overlap 1583821 CGACGCATCCGACAT TGTAGGGGCGAAA AATT TTTCGCCCCTACG GTTATCGAAACCATG Paes_1450 1583517 - 1584128 + | hypothetical protein TERM 1864 1584234 - 1584211 - T 71 -9.5 -3.05963 | ACCGGGATTGGAAGA CGGGCAGGC ACGGGG GCCTGCCCC TACAACAAATATTTC Paes_1451 1584457 - 1584293 - | hypothetical protein Paes_1452 1587665 - 1584504 - | protein of unknown function DUF323 TERM 1865 1588313 - 1588344 + G 100 -16 -3.29144 | overlap 1588314 GCGACGCATCCGACA TTGTAGGGGCGAAA AATT TTTCGCCCCTACGG TTATCGAAACCATGC TERM 1866 1588314 - 1588343 + G 100 -17.3 -2.57344 | overlap 1588313 CGACGCATCCGACAT TGTAGGGGCGAAA AATT TTTCGCCCCTACG GTTATCGAAACCATG Paes_1453 1588009 - 1588620 + | hypothetical protein Paes_1454 1589559 - 1588687 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit TERM 1867 1589488 - 1589501 + g 86 -3.7 -5.40072 | overlap 1589489 GTAGTTGCCGCATCC GGGGC ACCA GCCCA TTTTTTTGCCGGGAA Paes_1455 1591256 - 1589556 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 1868 1590237 - 1590211 - G 70 -5.1 -4.4261 | TCGGCAAGAGCAAAA GCACGCTGC ATGACATCG GCAGCCTGC GCAAAGGTCCCCGGA TERM 1869 1591616 - 1591598 - g 75 -5.2 -4.61482 | overlap 1591600 CCTTTCAAAAAACAA CAGGAAAG AAA CCTTCCGG CTCTATGGTATAGAC TERM 1870 1591660 - 1591645 - g 71 -2.5 -5.00884 | gap 1, overlap 1591646 ACTGCCCTGAAAAAA CCCAGC CGTTT GC-GGG CAAAGCCAGAACATT TERM 1871 1591989 - 1591972 - g 81 -6.9 -4.72272 | overlap 1591974 GCTCCTCAGCAAAAA CACCGGA CCTT TCCGGAG CAGATGGCCAGTTGT TERM 1872 1591987 - 1591974 - g 72 -8.1 -3.98256 | overlap 1591972 TCCTCAGCAAAAACA CCGGA CCTT TCCGG AGCAGATGGCCAGTT Paes_1456 1591452 - 1592006 + | nuclease (SNase domain protein) Paes_1457 1592022 - 1593368 + | Glu/Leu/Phe/Val dehydrogenase Paes_1458 1593388 - 1594089 + | short-chain dehydrogenase/reductase SDR TERM 1873 1594638 - 1594628 - g 74 -3.2 -5.0133 | CAGGTCCTGAAAAAA CTCA TGT CGAG CCAGAAGGTTGCATC Paes_1459 1594184 - 1595014 + | alpha/beta hydrolase fold Paes_1460 1595029 - 1595700 + | dTMP kinase TERM 1874 1596746 - 1596733 - g 71 -3.1 -4.8048 | gap 1 CCCCGAGAGCAAAAA CCTGCG TAT CG-AGG ATACGGGCCTTGACA Paes_1461 1595813 - 1597072 + | hypothetical protein TERM 1875 1597431 - 1597409 - g 81 -7 -4.66833 | GGGTAACCGCAAAAA CAAGGATTTC ACC GACATCCTCG TCAAGGAAGGACCCG Paes_1462 1597116 - 1600268 + | beta-phosphoglucomutase family hydrolase TERM 1876 1600304 - 1600270 - f 100 -17.3 -3.66654 | opp_overlap 1600272 1600278, overlap 1600272 1600278 CAGCTGAATGGTAAA GAGTAAAAGGCCGGC GCAAA GCCGGCCTTTTACTT TGTGGTAATCTATCC TERM 1877 1600272 - 1600302 + F 100 -19.9 -4.01184 | opp_overlap 1600270 1600272 1600278, overlap 1600278 GCTGAATGGTAAAGA GTAAAAGGCCGGC GCAAA GCCGGCCTTTTAC TTTGTGGTAATCTAT TERM 1878 1600302 - 1600272 - f 100 -19.9 -3.41222 | opp_overlap 1600272 1600278, overlap 1600270 1600278 GCTGAATGGTAAAGA GTAAAAGGCCGGC GCAAA GCCGGCCTTTTAC TTTGTGGTAATCTAT TERM 1879 1600296 - 1600278 - f 100 -13.1 -4.49756 | opp_overlap 1600278 1600272, overlap 1600272 1600270 TGGTAAAGAGTAAAA GGCCGGC GCAAA GCCGGCC TTTTACTTTGTGGTA TERM 1880 1600278 - 1600296 + F 100 -13.1 -4.63479 | opp_overlap 1600272 1600270 1600278, overlap 1600272 TGGTAAAGAGTAAAA GGCCGGC GCAAA GCCGGCC TTTTACTTTGTGGTA TERM 1881 1600574 - 1600586 + G 74 -3.3 -5.00616 | overlap 1600573 AGCACAAGACATTTG GCGAC ATC GTCTC TTTTTTCAAAAAAGG TERM 1882 1601458 - 1601472 + G 72 -6.4 -4.34737 | overlap 1601460 TATCGCTTTCTGGCC TATGGC GAT GCCATG TTTATTCATTAATAC Paes_1463 1600444 - 1601484 + | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 1883 1601827 - 1601812 - g 70 -3.9 -4.70659 | overlap 1601819 1601820 TTGCACATTGAAAAA GCCGA AATCGA CCGGC CAGACACCATTCTGG Paes_1464 1601506 - 1602240 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Paes_1465 1602566 - 1603021 + | thioesterase superfamily protein TERM 1884 1603249 - 1603232 - g 100 -7.7 -5.70829 | AAGACCAGAAAAAAA TGGCTGC TTAT ACAGCCA AAAAGCACCACCAGT TERM 1885 1603807 - 1603792 - g 72 -4.6 -4.62783 | opp_overlap 1603792 CATCTACGGCAAAAA CTACCG TTAC CGGGAG ATTGATTTTGTCATC Paes_1466 1603130 - 1604533 + | Radical SAM domain protein TERM 1886 1604591 - 1604568 - T 81 -11.7 -3.09834 | TATTCTATCAGGCAA CGGGCAGGC AAAGCG ACCTGCCCG TCAGAGCCTTTCCCC Paes_1467 1606214 - 1604913 - | HipA domain protein TERM 1887 1605762 - 1605780 + g 72 -11 -3.03124 | opp_overlap 1605761 1605762, overlap 1605739 ATGCCGCCTGAAAAC GCGTTGTG GAG CACGACGC TCTTCAAGGATAAGG Paes_1468 1606584 - 1606207 - | transcriptional regulator, XRE family TERM 1888 1606965 - 1606945 - R 100 -14 -5.86061 | GTTCACTAAAAAAAA GCCGCAGG AATAA CCTGCGGC TCAAGAAGATCAATA Paes_1469 1608817 - 1606991 - | aspartyl-tRNA synthetase TERM 1889 1607439 - 1607458 + g 75 -5 -4.74801 | gap 1, opp_overlap 1607444 GAGAATGGATTGTGC GAGAAGTCG ATC CGGCT-CTC TTTTTCATCGAATTC TERM 1890 1608772 - 1608753 - G 74 -10 -3.53224 | overlap 1608765 TATTCGGTGTTTAAA CGTCCGCA AAAG TGCGAACG AAATCGATTCTGTAA Paes_1470 1610755 - 1608902 - | DNA polymerase III, subunits gamma and tau TERM 1891 1609921 - 1609911 - G 71 -2.4 -4.92757 | TTATCAATAACAAAA CGGG CAA CCTG AAGCATCTTCACCGG TERM 1892 1610227 - 1610217 - G 77 -6.8 -4.54727 | overlap 1610202 CGTTTGAAATTAAAA CGCT GAC AGCG AGAAGAAATAGTCGC Paes_1471 1612020 - 1610752 - | ribonuclease BN TERM 1893 1610813 - 1610782 - G 74 -5.8 -4.56597 | gap 1, opp_overlap 1610800 1610807, overlap 1610783 CGCTGTGTTCAAAAA CGCAGCAAGCGGCTG ATG CATC-GCATGCTGCA GGCATTGGATGATAT Paes_1472 1613344 - 1612085 - | major facilitator superfamily MFS_1 TERM 1894 1612658 - 1612640 - G 82 -2.3 -5.45802 | GTTGTAAAAGAAAAA TGCGAGC AAAAA ACGCGCA AGGTCAGGATAATTC TERM 1895 1612729 - 1612740 + g 100 -3.6 -6.02914 | TCATAAACGTTCTGC CGGG AAGC TCCG TTTTTTTTCTATCCC TERM 1896 1613147 - 1613112 - G 71 -2.4 -4.88258 | gap 1, overlap 1613107 1613133 AAAATGAGAAGAAAA CGTTTCCGCCTGCCG GACATAT CGGC-GGCCGCACCG AGAAACGGGGAGATA TERM 1897 1613387 - 1613376 - R 72 -3.6 -5.00884 | AGTTGCGGGAAAAAA CGCC AGGC AGCG ACCGAGGAGGAAAAA TERM 1898 1613453 - 1613403 - R 80 -6.9 -4.77438 | opp_overlap 1613404, overlap 1613404 1613405 ACCGAGGAGGAAAAA GCTTGCTCCAGTGTA-CCGGAAATC GAT GATATCCGGGTACCCTGGAGCG-GA TAGTCGTTACCTTCC TERM 1899 1613452 - 1613404 - R 77 -10.4 -3.4574 | opp_overlap 1613404, overlap 1613403 1613405 CCGAGGAGGAAAAAG CTTGCTCCAGTGTA-CCGGAAATC GAT GATATCCGGGTACCCTGGAGCG-G ATAGTCGTTACCTTC TERM 1900 1613452 - 1613405 - R 74 -10.6 -2.66962 | gap 1, opp_overlap 1613404, overlap 1613404 1613403 CGAGGAGGAAAAAGC TTGCTCCAGTGTA-CCGGAAATC GAT GATATCCGGGTACCCTGGAGCGG ATAGTCGTTACCTTC Paes_1473 1614164 - 1613460 - | phosphoribosylformylglycinamidine synthase I Paes_1474 1614458 - 1614177 - | phosphoribosylformylglycinamidine synthase, purS Paes_1475 1615251 - 1614484 - | CDP-diacylglycerol/serine O-phosphatidyltransferase Paes_1476 1616297 - 1615464 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Paes_1477 1617146 - 1616319 - | biotin/lipoate A/B protein ligase TERM 1901 1616512 - 1616494 - G 77 -11.8 -3.21395 | opp_overlap 1616494, overlap 1616492 ACGGCGGCCAGAACA TCGCTATC GGA GATAGCGA TCAGTTCACGAATCA TERM 1902 1616494 - 1616512 + g 72 -11.8 -2.52896 | opp_overlap 1616494 1616492 ACGGCGGCCAGAACA TCGCTATC GGA GATAGCGA TCAGTTCACGAATCA Paes_1478 1618066 - 1617497 - | hypothetical protein TERM 1903 1618151 - 1618191 + H 84 -7.6 -4.96646 | gap 1 AAACTTTTTGTAAGT TTCTTGAGGGCTGC-GCTG CGTG CGGCTGCCACCTTCAAGAA TTTTTCATTCTCTGA Paes_1479 1618335 - 1618739 + | CoA-binding domain protein TERM 1904 1619693 - 1619705 + G 87 -4.8 -5.24129 | opp_overlap 1619693 TGAATGCAGAGGAAT GTCG CGAGT CGAC TTTTTTATCGAACAC Paes_1480 1618791 - 1619873 + | D-alanine/D-alanine ligase Paes_1481 1619948 - 1620502 + | hypothetical protein TERM 1905 1620734 - 1620719 - g 100 -6.1 -5.85737 | ACAGGAATAAAAAAA GCAGC CTATGC GCTGC GGCTTCAGGGTTCGG Paes_1482 1620533 - 1621948 + | outer membrane efflux protein Paes_1483 1621961 - 1623220 + | efflux transporter, RND family, MFP subunit Paes_1484 1623229 - 1623939 + | ABC transporter related TERM 1906 1624523 - 1624511 - g 75 -5.5 -4.60487 | opp_overlap 1624502, overlap 1624501 GATCAGGCTGAAAAA CCAGA AAT TCCGG GTTATCGGCGTCTTT TERM 1907 1624561 - 1624545 - g 71 -2.1 -5.00616 | opp_overlap 1624545, overlap 1624547 GGCGTCTTTAAAAAA CAGGGGA AAT TCCTCGG TTTGTTCAGTTTCGA TERM 1908 1625098 - 1625121 + G 73 -9.6 -3.67517 | TTCTGGTGAGCATTA CGGTATCCGT TCTG ACGGGTATCG TTTCAGGTCTTGCTC Paes_1485 1623936 - 1625189 + | protein of unknown function DUF214 TERM 1909 1625318 - 1625328 + G 100 -8.2 -5.1925 | overlap 1625316 GACCACCATGGGGGT CGCC GTC GGCG TTTTTTCCATTATCG TERM 1910 1625571 - 1625543 - g 78 -5.3 -4.87318 | overlap 1625545 1625546 GGGAAAAGCCAAAAA TATCGGACTGAAA ATC TCTCAATCCGGCA ACCAGGCGATCTATG TERM 1911 1626242 - 1626252 + G 79 -2.4 -5.30616 | overlap 1626241 TCTTCGCCAGTTCCT GCTC GAA GCGC TTTTTCTTTCACTGA TERM 1912 1626386 - 1626396 + G 85 -8.2 -4.48902 | AATCGCCGTTTGTTC CGCC ATT GGCG TTTCTTTCGGTATAT Paes_1486 1625235 - 1626467 + | protein of unknown function DUF214 Paes_1487 1626490 - 1626954 + | membrane protein TERM 1913 1626996 - 1626986 - T 72 -6.8 -4.1552 | CAGTCCCGGAAGAAA CGAC ATG GTCG ATGCAAACCGTGCGA Paes_1488 1627963 - 1626965 - | hypothetical protein TERM 1914 1627340 - 1627318 - G 75 -12 -3.05807 | TGAAAACAGGATAGA GCGTCTTGAG CTG CTCATGACGC AACAGACAGATATTG TERM 1915 1628061 - 1628083 + H 93 -12.2 -3.94333 | opp_overlap 1628052 1628065, overlap 1628065 AGTATAGTTCCATTA TAAATGGATC AGT GATCCATTTA TTTCATGTATTGCTC TERM 1916 1628079 - 1628065 - H 76 -8.6 -3.96624 | opp_overlap 1628061 1628065, overlap 1628052 TAGTTCCATTATAAA TGGATC AGT GATCCA TTTATTTCATGTATT TERM 1917 1628065 - 1628079 + H 87 -8.6 -4.56113 | opp_overlap 1628052 1628065, overlap 1628061 TAGTTCCATTATAAA TGGATC AGT GATCCA TTTATTTCATGTATT Paes_1489 1628123 - 1628812 + | OmpA/MotB domain protein TERM 1918 1628827 - 1628865 + F 100 -16.3 -2.87132 | opp_overlap 1628828 1628831 1628838, overlap 1628831 1628838 ACGCCCCTGTCGCAA ACAATAAAAAAGCTCCC CTTCC GGGAGCTTTTTTATTGC TCTATCCGCCAAACC TERM 1919 1628864 - 1628828 - f 100 -19.8 -3.53012 | opp_overlap 1628827 1628831 1628838, overlap 1628831 1628838 CGCCCCTGTCGCAAA CAATAAAAAAGCTCCC CTTCC GGGAGCTTTTTTATTG CTCTATCCGCCAAAC TERM 1920 1628861 - 1628831 - f 100 -15.7 -3.90744 | opp_overlap 1628827 1628831 1628838, overlap 1628828 1628838 CCCTGTCGCAAACAA TAAAAAAGCTCCC CTTCC GGGAGCTTTTTTA TTGCTCTATCCGCCA TERM 1921 1628831 - 1628861 + F 100 -15.7 -3.32022 | opp_overlap 1628831 1628828 1628838, overlap 1628827 1628838 CCCTGTCGCAAACAA TAAAAAAGCTCCC CTTCC GGGAGCTTTTTTA TTGCTCTATCCGCCA TERM 1922 1628854 - 1628838 - f 100 -9.4 -5.72254 | opp_overlap 1628838 1628831 1628827, overlap 1628831 1628828 GCAAACAATAAAAAA GCTCCC CTTCC GGGAGC TTTTTTATTGCTCTA TERM 1923 1628838 - 1628854 + F 100 -9.4 -5.5353 | opp_overlap 1628831 1628828 1628838, overlap 1628831 1628827 GCAAACAATAAAAAA GCTCCC CTTCC GGGAGC TTTTTTATTGCTCTA TERM 1924 1630912 - 1630896 - g 93 -2.1 -5.60993 | overlap 1630897 CTGTCGAGAAAAAAA CCCCCAG TGA CGAGGAG ATCGCCGTCAAGCTT Paes_1490 1629008 - 1631692 + | glycoside hydrolase 15-related Paes_1491 1632790 - 1631717 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Paes_1492 1632956 - 1633909 + | ribose-phosphate pyrophosphokinase Paes_1493 1633953 - 1634558 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1925 1634615 - 1634590 - f 77 -4.7 -5.1101 | opp_overlap 1634590, overlap 1634610 CGATCATTGAAAAAA GCTGCCTGT TGTCAAAG AGAGGCAGC TTTTTTTTATCTGCC TERM 1926 1634590 - 1634615 + F 100 -5.4 -6.02914 | opp_overlap 1634590 1634610 CGATCATTGAAAAAA GCTGCCTGTT GTCAAA GAGAGGCAGC TTTTTTTTATCTGCC Paes_1494 1634735 - 1636228 + | binding-protein-dependent transport systems inner membrane component Paes_1495 1636235 - 1636783 + | NUDIX hydrolase TERM 1927 1636830 - 1636820 - g 88 -2.4 -5.52909 | GAAGAGTGAAAAAAA GCTG AAG CTGC TCGAAGAAACCATTA Paes_1496 1636803 - 1637084 + | hypothetical protein Paes_1497 1639328 - 1637142 - | ComEC/Rec2-related protein TERM 1928 1637928 - 1637910 - G 71 -2.4 -5.00616 | overlap 1637922 CGTGTGGGCAAAAAA CCATGC AGAGGAG GCATAG AGTTCTGCCAACGGC TERM 1929 1638195 - 1638210 + g 70 -10.4 -3.21099 | opp_overlap 1638185 1638194 1638195 ATAGAGCAGCAGAAT CGCTGC CACG GCAGCG TTCGTCATGAGAAAA TERM 1930 1638628 - 1638607 - G 100 -10.1 -5.00884 | AGCCCCCTGAAAAAA TCCCGTTCG TGCC CGGACGGGA ACAACGTATCGAGAG TERM 1931 1638678 - 1638658 - G 72 -4.7 -4.63218 | overlap 1638670 GCGTCTTCAAGAAAA TGTCGCACA GGA CGTACAACA TATGAGTCGAACGGC Paes_1498 1639438 - 1640328 + | 5,10-methylenetetrahydrofolate reductase TERM 1932 1640410 - 1640391 - T 100 -12.1 -6.02914 | CTCATAGAAAAAAAA GGGGGGC TGATTC GCCCCCC GTGCAACAGAACGTT Paes_1499 1641694 - 1640444 - | diaminopimelate decarboxylase TERM 1933 1640528 - 1640543 + g 77 -10.4 -3.6216 | opp_overlap 1640496 GACCATCACCTCGGC CGGACG CAGA CGTCCG TTATAATTATTACTC TERM 1934 1641956 - 1641940 - g 100 -2.2 -6.4275 | GAAAAACAAAAAAAA CCAGAC CGAGC GTCTTG TGCTCAAAAAGTACA Paes_1500 1641836 - 1642015 + | ribosomal protein L33 TERM 1935 1642261 - 1642280 + F 100 -8.6 -5.95539 | TTTCTTATCCATACT GCACCTTA CTTA TGAGGTGC TTTTTTTATTTGAAC TERM 1936 1642375 - 1642333 - g 90 -7.8 -5.00895 | TGGACCATACAAAAA TCAACCTCATTGTCCGGCTG CAA CACCTGGACAATCAAATTGA AAGCATCATCAGCCT Paes_1501 1642317 - 1643126 + | protein of unknown function DUF164 TERM 1937 1643134 - 1643169 + T 81 -9.8 -4.09685 | gap 1 AGGATTGACCTGCAA CCGGAACG-CCTTGC CTTATGC GCAATGACGTTCCGG TTTTCCAGCCTCAGG TERM 1938 1643602 - 1643590 - T 77 -3.3 -5.18355 | overlap 1643593 TCCAAAAAGGAAAAA GAGCG GTC CGTTC AATTCTGAACAGAGA TERM 1939 1643686 - 1643648 - T 76 -11.1 -3.07876 | gap 1, overlap 1643645 GCATCAGATAAATGA CTGCAACTCTCCTCCGGT CACG ACCGGAAGAGAGA-ACAG AATTCGGCTTACATC TERM 1940 1643703 - 1643713 + T 71 -2.4 -5.17353 | ATTCGGCTTACATCT GCGG TAT CGGC TTTTTTAATCCATCT Paes_1502 1644884 - 1643718 - | aminotransferase class I and II TERM 1941 1643795 - 1643811 + g 70 -5.1 -4.4078 | opp_overlap 1643790, overlap 1643788 1643787 TGGCGTAACAGAACC TGACCAG GTG CTGATCA TTTTCATTGCGAAAA TERM 1942 1644326 - 1644305 - G 84 -3.7 -5.19879 | overlap 1644297 CGGTAAACACAAAAA GATCGTGCT CCTC AGCAAAATC GGCTATACGCTGCAG TERM 1943 1644589 - 1644574 - G 81 -9 -4.08945 | AGCAGTGCCTGAAAA GCGCAA TACA TTGCGC CGGTGGCACCCGCAC Paes_1503 1645425 - 1644940 - | protein of unknown function DUF456 TERM 1944 1645378 - 1645362 - G 86 -3.5 -5.40072 | overlap 1645363 1645364 GCGCCGGCAAAAAAA GCCCGGC AAC GCCCGCC GAAAAAAGAACGGCC Paes_1504 1645898 - 1645617 - | hypothetical protein TERM 1945 1645668 - 1645654 - G 84 -7.8 -4.64844 | overlap 1645656 CGCACACAGATAAAA TCCCCG GTA CGGGAA AAACTGAGCGGCGTA Paes_1505 1646603 - 1646178 - | protein of unknown function UPF0054 Paes_1506 1647894 - 1646593 - | GTP-binding proten HflX TERM 1946 1646889 - 1646862 - G 74 -3.3 -4.96848 | opp_overlap 1646865, overlap 1646865 TCGCGGATACAAAAA GAGCTTCGGGA TAGTGC TCCCGCAGTCC GCGAAGTTTTTCAGC TERM 1947 1646865 - 1646895 + g 72 -4.7 -4.60487 | gap 1, opp_overlap 1646862 1646865 CGGATACAAAAAGAG CTTCG-GGATAGTG CTCC CGCAGTCCGCGAAG TTTTTCAGCGTCATC TERM 1948 1647946 - 1647919 - H 72 -7.8 -3.918 | opp_overlap 1647945, overlap 1647912 1647921 1647941 1647945 ATATAAATCATGAAA CAGTTGCATGCT ATCG AGCATACAACCA CGCGATTGCGTATTG TERM 1949 1647944 - 1647921 - H 77 -10.4 -3.53511 | overlap 1647912 1647919 1647941 ATAAATCATGAAACA GTTGCATGCT ATCG AGCATACAAC CACGCGATTGCGTAT TERM 1950 1648980 - 1648992 + G 70 -4.8 -4.56775 | ATGTCTTCTCGCAAC GAGC CTACC GCTC TTTTTACCAGAAAAT Paes_1507 1648121 - 1649050 + | Squalene/phytoene synthase Paes_1508 1649131 - 1650675 + | lysyl-tRNA synthetase TERM 1951 1650768 - 1650735 - g 100 -13.2 -4.11216 | gap 1, overlap 1650736 GCCTCAGCTTGAAAA CGCTCCCCTGCTCGA ACTCA TCGAGCAGGGG-GAG TCAAAGCACACCGAA TERM 1952 1650769 - 1650736 - g 75 -11.8 -3.06515 | gap 1, overlap 1650735 CCTCAGCTTGAAAAC GCT-CCCCTGCTCGA ACTCA TCGAGCAGGGGGAGT CAAAGCACACCGAAT TERM 1953 1651228 - 1651212 - g 85 -7.3 -4.86862 | overlap 1651227 CGGAAAAAACGAAAA GATGCTC CTG GAACATC TCGGGCGTCACGGGA Paes_1509 1650706 - 1651377 + | putative transcriptional regulator Paes_1510 1652433 - 1651408 - | NAD-dependent epimerase/dehydratase TERM 1954 1652414 - 1652402 - G 95 -10.5 -4.51196 | overlap 1652393 TGGAAACCGATAAAA CCGGC TGC GCCGG TAACAAGTATTTTAT Paes_1511 1652969 - 1652451 - | NusG antitermination factor Paes_1512 1653082 - 1654221 + | queuine tRNA-ribosyltransferase TERM 1955 1654642 - 1654678 + G 75 -11.7 -3.02511 | gap 1, opp_overlap 1654642 1654643, overlap 1654654 ACGCATGGCTGAAAA TCGCAGAAGGATGCAG CAGAAC CTGC-TCCTTCTGCGC TATTCCGAAAATGAG TERM 1956 1654678 - 1654642 - g 91 -11.7 -4.09864 | gap 1, opp_overlap 1654642 1654654, overlap 1654643 ACGCATGGCTGAAAA TCGCAGAAGGATGCAG CAGAAC CTGC-TCCTTCTGCGC TATTCCGAAAATGAG TERM 1957 1654677 - 1654643 - g 95 -15.2 -3.05597 | gap 1, opp_overlap 1654642 1654654, overlap 1654642 CGCATGGCTGAAAAT CGCAGAAGGATGCAG CAGAAC CTGC-TCCTTCTGCG CTATTCCGAAAATGA Paes_1513 1654218 - 1655519 + | MiaB-like tRNA modifying enzyme YliG Paes_1514 1655785 - 1655552 - | hypothetical protein Paes_1515 1657270 - 1655816 - | glycerol kinase TERM 1958 1657397 - 1657387 - H 74 -3.2 -5.08824 | CTCCGACGCAAAAAA TCCC CCG AGGA AGAACCCTGTCAGCA TERM 1959 1657408 - 1657421 + H 79 -3.8 -5.28755 | overlap 1657404 GAGGAAGAACCCTGT CAGC ATTACA GCTG TTTTTTACTATATTT Paes_1516 1657550 - 1658143 + | Shikimate kinase Paes_1517 1658140 - 1659219 + | 3-dehydroquinate synthase TERM 1960 1659216 - 1659202 - T 77 -5 -4.96848 | GGCGCTATAGAAAAA GCAAAA ACG TTCTGC TGAAAAGGTTCGTCA Paes_1518 1660037 - 1659255 - | putative transcriptional acitvator, Baf family TERM 1961 1659813 - 1659803 - G 90 -6.8 -5.09895 | TACGCATTGAAAAAA GCTC TTT GAGC GCAACTGCGAAAAGA Paes_1519 1660562 - 1660056 - | hypothetical protein Paes_1520 1660683 - 1661102 + | protein of unknown function UPF0047 TERM 1962 1661158 - 1661176 + T 100 -4.4 -5.67063 | opp_overlap 1661158 TCTGGCATAAAAAAA GGGAGCAT TGA AGGCCCCC TTTTTTTATAGTCCA TERM 1963 1661176 - 1661158 - T 100 -6.6 -5.60993 | opp_overlap 1661158 TCTGGCATAAAAAAA GGGAGCAT TGA AGGCCCCC TTTTTTTATAGTCCA Paes_1521 1663349 - 1661205 - | glutamine synthetase catalytic region Paes_1522 1663929 - 1663405 - | transcriptional regulator, AsnC family TERM 1964 1663443 - 1663459 + g 83 -5.1 -5.07486 | opp_overlap 1663443 CAAAACTGATAAGCA CCTGC CGGTCGA GCAGG TTTTTCTTGACAATC TERM 1965 1663749 - 1663771 + g 72 -7.1 -4.21194 | gap 1 CGAAGCCCAGCTGCC GTTCATCGAC AACC GTCG-TGAAC TTTTGAATAATCCCC Paes_1523 1664171 - 1664359 + | hypothetical protein Paes_1524 1664504 - 1665865 + | Carotene 7,8-desaturase TERM 1966 1665889 - 1665929 + F 100 -24.3 -3.79747 | opp_overlap 1665867 1665896, overlap 1665891 CACTCCTGAGACAGT CTGAGAAGGCCGGAAAAAA TGT TTTTTTCCGGCCTTCTCTG TTTCCTGATACATCA TERM 1967 1665891 - 1665927 + F 100 -25.5 -3.48292 | opp_overlap 1665867 1665896, overlap 1665889 CTCCTGAGACAGTCT GAGAAGGCCGGAAAAAA TGT TTTTTTCCGGCCTTCTC TGTTTCCTGATACAT TERM 1968 1665922 - 1665896 - f 100 -18.2 -3.32819 | opp_overlap 1665891 1665889, overlap 1665867 GAGACAGTCTGAGAA GGCCGGAAAAAA TGT TTTTTTCCGGCC TTCTCTGTTTCCTGA TERM 1969 1666083 - 1666071 - g 91 -9.1 -4.72986 | CATTTTTACGAAAAA TCCGG TAG CCGGA CGAGTTAAAACAAGG TERM 1970 1666117 - 1666097 - g 76 -7.5 -4.22883 | opp_overlap 1666094 GACGAGTTAAAACAA GGCTTGCTG CAT CGACAAGCC CGGATTTCGCTCTTG TERM 1971 1666290 - 1666336 + G 100 -15.2 -3.44051 | opp_overlap 1666292 1666293, overlap 1666291 AAACCTGGGAGAAAA AATGCTCGAAGCCTTCACAGAG GGC TTCCGTGAAGGCTTCGAGCGCA TTGTCCTCATAGGAA TERM 1972 1666291 - 1666335 + G 100 -18.7 -2.66216 | opp_overlap 1666292 1666293, overlap 1666290 AACCTGGGAGAAAAA ATGCTCGAAGCCTTCACAGAG GGC TTCCGTGAAGGCTTCGAGCGC ATTGTCCTCATAGGA TERM 1973 1666334 - 1666292 - g 100 -21.5 -5.24531 | opp_overlap 1666291 1666290, overlap 1666293 ACCTGGGAGAAAAAA TGCTCGAAGCCTTCACAGA GGGCT TCCGTGAAGGCTTCGAGCG CATTGTCCTCATAGG TERM 1974 1666333 - 1666293 - g 100 -25 -3.73995 | opp_overlap 1666291 1666290, overlap 1666292 CCTGGGAGAAAAAAT GCTCGAAGCCTTCACAGA GGGCT TCCGTGAAGGCTTCGAGC GCATTGTCCTCATAG Paes_1525 1666036 - 1666635 + | hypothetical protein TERM 1975 1666769 - 1666795 + G 71 -10.9 -2.83905 | opp_overlap 1666756 1666765 CAGTGACAGCACTGC CGCACAGGC AGCCCAATG GCCTGTGCG TGTCATCCGTTCTCC Paes_1526 1666632 - 1667315 + | glycosyl transferase family 2 Paes_1527 1667452 - 1668318 + | hypothetical protein TERM 1976 1668367 - 1668319 - f 100 -13.3 -3.49618 | gap 2, opp_overlap 1668333, overlap 1668320 1668333 GGCCGACAGAAGTAA TGCGCCACT--CCAAACCCCTGC GCCTG GCAGGGGTTTGGACAGCAGCGCC TCGCAAGACATTACG TERM 1977 1668366 - 1668320 - f 100 -16.8 -2.69449 | gap 2, opp_overlap 1668333, overlap 1668319 1668333 GCCGACAGAAGTAAT GCGCCACT--CCAAACCCCTGC GCCTG GCAGGGGTTTGGACAGCAGCGC CTCGCAAGACATTAC TERM 1978 1668333 - 1668351 + F 88 -11.7 -3.53012 | opp_overlap 1668333 1668320 1668319 ATGCGCCACTCCAAA CCCCTGC GCCTG GCAGGGG TTTGGACAGCAGCGC TERM 1979 1668351 - 1668333 - f 89 -11.7 -3.60098 | opp_overlap 1668333, overlap 1668320 1668319 ATGCGCCACTCCAAA CCCCTGC GCCTG GCAGGGG TTTGGACAGCAGCGC TERM 1980 1668562 - 1668548 - g 100 -10 -5.94713 | ATTTCATAAAAAAAA TGGGCT ATG AGCCCA TCTACGCCATAGACG Paes_1528 1668424 - 1669863 + | two component, sigma54 specific, transcriptional regulator, Fis family Paes_1529 1670396 - 1669959 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 1981 1670325 - 1670361 + g 84 -3.7 -5.27335 | gap 1, opp_overlap 1670317, overlap 1670318 1670317 GGCAATATCCATTCC TGCTG-CATGCTGCGT CGCATA ACGCGGCAGGATGGCA TTTTTGTTTACACGA TERM 1982 1670873 - 1670859 - g 83 -5.7 -5.0538 | overlap 1670868 CCGGACTTCAAAAAA TCCAG ACCAG CTGGA ATAACCAGCCCCAGG Paes_1530 1670453 - 1671190 + | LmbE family protein Paes_1531 1672138 - 1671197 - | Thioredoxin-disulfide reductase TERM 1983 1673070 - 1673049 - g 77 -10.2 -3.58343 | opp_overlap 1673049 CTTACCATGCTGAAA TCAGGGCA GCTCGA TGCCCTGA TTTCGGCTGGAGGCC TERM 1984 1673049 - 1673070 + G 77 -10.2 -3.59979 | opp_overlap 1673049 CTTACCATGCTGAAA TCAGGGCA GCTCGA TGCCCTGA TTTCGGCTGGAGGCC TERM 1985 1673655 - 1673676 + G 78 -10.9 -3.4678 | CTCTCGGGTCTTGCT GCTGAGACG CTGC CGTTTCAGC TTATCATCTGGGGAT TERM 1986 1673726 - 1673706 - g 74 -2.5 -5.0538 | opp_overlap 1673706 TCGGATTTCAAAAAA CGCCCAT TCAACTC ATCGGCG TTTCAGCATGAGGAG Paes_1532 1672275 - 1673954 + | extracellular solute-binding protein family 5 Paes_1533 1674054 - 1674527 + | 2-vinyl bacteriochlorophyllide hydratase TERM 1987 1674785 - 1674765 - g 95 -9.7 -4.72556 | opp_overlap 1674764 1674763 GGAAAAATCACAAAA GTCGGTGAC CAT GTCAACGAC AGTCTTTTAGGAAAA Paes_1534 1674546 - 1675511 + | chlorophyll synthesis pathway, BchC TERM 1988 1676574 - 1676556 - g 70 -5.2 -4.3341 | overlap 1676567 AGTAGAAAAAAAAAC CACTGCCG AAA CCGCAATG CTGAAAGGCATTGAG Paes_1535 1675561 - 1676658 + | chlorophyllide reductase iron protein subunit X TERM 1989 1676809 - 1676780 - T 100 -23.7 -3.59979 | opp_overlap 1676780 1676782 1676786 GCCTCCGAGCCCAAA CACCAAGGGCGCC TGTC GGCGCCCTTGGTG TGTTCAATGCATCAA TERM 1990 1676780 - 1676809 + T 100 -23.7 -3.09878 | opp_overlap 1676780, overlap 1676782 1676786 GCCTCCGAGCCCAAA CACCAAGGGCGCC TGTC GGCGCCCTTGGTG TGTTCAATGCATCAA TERM 1991 1676782 - 1676807 + T 100 -20.5 -3.1082 | opp_overlap 1676780, overlap 1676780 1676786 CTCCGAGCCCAAACA CCAAGGGCGCC TGTC GGCGCCCTTGG TGTGTTCAATGCATC TERM 1992 1676786 - 1676803 + T 100 -14.1 -3.38207 | opp_overlap 1676780, overlap 1676782 1676780 GAGCCCAAACACCAA GGGCGCC TGTC GGCGCCC TTGGTGTGTTCAATG Paes_1536 1678663 - 1676837 - | GTP-binding protein TypA Paes_1537 1678831 - 1679676 + | cytochrome c assembly protein Paes_1538 1679797 - 1681077 + | glutamyl-tRNA reductase Paes_1539 1681105 - 1682043 + | porphobilinogen deaminase TERM 1993 1682158 - 1682112 - g 88 -10.9 -4.14541 | opp_overlap 1682112 1682113, overlap 1682114 1682149 CAGGAATTACAGAAA TACGGTCTGAACTCTGTTGTC TTTCC GACAATAGAGATCAGACCGGC TTCTGACTGGAATAT TERM 1994 1682112 - 1682158 + G 89 -13.1 -3.36505 | opp_overlap 1682112 1682114 1682149, overlap 1682113 CAGGAATTACAGAAA TACGGTCTGAACTCTGTTGTC TTTCC GACAATAGAGATCAGACCGGC TTCTGACTGGAATAT TERM 1995 1682113 - 1682157 + G 100 -16.6 -2.61582 | opp_overlap 1682112 1682114 1682149, overlap 1682112 AGGAATTACAGAAAT ACGGTCTGAACTCTGTTGTC TTTCC GACAATAGAGATCAGACCGG CTTCTGACTGGAATA TERM 1996 1682156 - 1682114 - g 100 -17.9 -3.66117 | opp_overlap 1682113 1682112, overlap 1682112 1682149 GGAATTACAGAAATA CGGTCTGAACTCTGTTGTC TTTCC GACAATAGAGATCAGACCG GCTTCTGACTGGAAT TERM 1997 1682334 - 1682311 - g 70 -4.4 -4.56775 | overlap 1682312 ACGCTGTGGGAAAAA CGACCGCACG TGAT CTTGCGGCCT ACGGTATAACCACTG Paes_1540 1682043 - 1682792 + | Uroporphyrinogen-III synthase Paes_1541 1684147 - 1682795 - | protein of unknown function DUF195 Paes_1542 1684985 - 1684224 - | histidinol-phosphate phosphatase Paes_1543 1685789 - 1685001 - | hypothetical protein TERM 1998 1685642 - 1685664 + g 77 -9.9 -3.62275 | gap 1, opp_overlap 1685640 1685638 TCATTGACGAATATT GCGGATCGGC ATCC GCC-ATCCGC TTTCCGGTAGTCCAT TERM 1999 1685839 - 1685823 - R 74 -3.7 -5.00884 | overlap 1685824 1685825 ACCTCTCGGAAAAAA CCCTGTT GCA AACAGAA ATGAACACAATAAAG Paes_1544 1686394 - 1685927 - | CMP/dCMP deaminase zinc-binding TERM 2000 1686173 - 1686202 + gr 80 -7.2 -4.56597 | ACAGGAGGAATAGAG CTCACAGCCTTC CAGCTT GAAGGTTTTGAG TTTTTGCGAAGCAGC Paes_1545 1686614 - 1686369 - | hypothetical protein TERM 2001 1686559 - 1686547 - GH 71 -3.3 -4.74539 | overlap 1686538 1686548 AATAACGCAATAAAA CCGAT TGC AGCGG CAGCGTAAAGCATGC Paes_1546 1686721 - 1687773 + | Porphobilinogen synthase TERM 2002 1687802 - 1687829 + F 100 -17 -5.06816 | opp_overlap 1687793, overlap 1687804 TCAACAGATCTTCAC GCCCCGGCTGCA GCAG TGCAGCCGGGTC TTTTTATTCCAGGAT TERM 2003 1687804 - 1687827 + F 100 -18.2 -4.16307 | opp_overlap 1687793, overlap 1687802 AACAGATCTTCACGC CCCGGCTGCA GCAG TGCAGCCGGG TCTTTTTATTCCAGG Paes_1547 1687850 - 1689043 + | Chorismate synthase TERM 2004 1689066 - 1689090 + T 95 -14.3 -3.25823 | opp_overlap 1689060 1689057 AAACAATCATTCGAG CCGGCGACTGT TCT GCAGTCGCTGG TTCATATCGAGCGAC Paes_1548 1689851 - 1689057 - | serine O-acetyltransferase TERM 2005 1690115 - 1690104 - H 91 -2.2 -5.80817 | overlap 1690105 1690106 TGCAACAGAAAAAAA TGCC AATC AGCA CCTGACTGATGAAAA Paes_1550 1690502 - 1690936 + | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein TERM 2006 1690972 - 1690942 - T 100 -14.8 -4.01071 | opp_overlap 1690944 1690949, overlap 1690944 1690949 AGAAGAGTAACGAAA GAGAAAACCCCGGA AAT CCCGGGGTTTTCTG GTTATATCGTCATAG TERM 2007 1690944 - 1690970 + T 100 -16.7 -2.90888 | opp_overlap 1690944 1690942 1690949, overlap 1690949 AAGAGTAACGAAAGA GAAAACCCCGG AAATC CCGGGGTTTTC TGGTTATATCGTCAT TERM 2008 1690970 - 1690944 - T 100 -17.4 -3.58518 | opp_overlap 1690944 1690949, overlap 1690942 1690949 AAGAGTAACGAAAGA GAAAACCCCGGA AAT CCCGGGGTTTTC TGGTTATATCGTCAT TERM 2009 1690949 - 1690965 + T 95 -10.8 -4.60073 | opp_overlap 1690944 1690942 1690949, overlap 1690944 TAACGAAAGAGAAAA CCCCGG AAATC CCGGGG TTTTCTGGTTATATC TERM 2010 1690965 - 1690949 - T 100 -11.5 -4.84539 | opp_overlap 1690949 1690944, overlap 1690944 1690942 TAACGAAAGAGAAAA CCCCGGA AAT CCCGGGG TTTTCTGGTTATATC Paes_1551 1691522 - 1691004 - | GCN5-related N-acetyltransferase TERM 2011 1691759 - 1691727 - R 100 -15.7 -5.80951 | opp_overlap 1691727 ATCGAAAACAAAAAA GCCGCCACGCTATCT AAT AAATAGCATGACGGC TTTCTGCTCCCTCAC TERM 2012 1691727 - 1691759 + r 79 -9.1 -3.97947 | opp_overlap 1691727 ATCGAAAACAAAAAA GCCGCCACGCTATCT AAT AAATAGCATGACGGC TTTCTGCTCCCTCAC Paes_1552 1692379 - 1691786 - | hypothetical protein TERM 2013 1692473 - 1692451 - R 83 -2.7 -5.47821 | opp_overlap 1692462 ATTGATCCAAAAAAA TTCACGTCT CATTC AGGCATGAA TATTCAATCAACCTG TERM 2014 1692741 - 1692714 - R 100 -10.7 -4.95155 | opp_overlap 1692714 1692709 CTTACAGTACAAAAA GGGTTACCATA AAACCA TATGGCAACCC TTTTAATTATAGACA TERM 2015 1692714 - 1692741 + r 87 -8.5 -4.48987 | opp_overlap 1692714, overlap 1692709 CTTACAGTACAAAAA GGGTTACCATA AAACCA TATGGCAACCC TTTTAATTATAGACA Paes_1553 1693149 - 1692781 - | Dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 2016 1693117 - 1693075 - G 77 -2.7 -5.08169 | gap 1, overlap 1693076 AGACACTGCAAAAAA CGGAGCGCT-CCCAAAATGT TCGC ACACTTTGGACAGGGCACCT TCATTCTCGTCAAGT TERM 2017 1693404 - 1693414 + r 74 -8.2 -4.05747 | TTGGCAGGACGGACA GGCC GAC GGCC TTTCTATACCGTGTG TERM 2018 1693658 - 1693640 - R 100 -11.7 -5.53436 | ATATAACATAAAAAA GGCTCCC GTCAA GGGAGCC ACATACTATTTTTCA Paes_1555 1694622 - 1693705 - | protein of unknown function DUF89 Paes_1556 1695981 - 1694725 - | DEAD/DEAH box helicase domain protein TERM 2019 1695813 - 1695827 + g 75 -4.9 -4.8048 | opp_overlap 1695813 1695814, overlap 1695814 GTTGCAGCAAAGGAA TGGCG AATGC CGCCG TTTTTCCTGTCCCCG Paes_1557 1696176 - 1696364 + | hypothetical protein Paes_1558 1696367 - 1696849 + | hypothetical protein Paes_1559 1697827 - 1696877 - | Radical SAM domain protein TERM 2020 1697780 - 1697794 + g 74 -10 -3.55444 | AACATCGACGCCGAG CGACTG GCC CAGTCG TTTGGAAGATACCGG Paes_1560 1699263 - 1697911 - | PUCC protein TERM 2021 1699245 - 1699235 - G 85 -3.2 -5.44119 | CCCATCTGAAAAAAA GCCA GCC TGAC AAGATTGAACTTCCT Paes_1561 1699620 - 1701305 + | thiamine biosynthesis protein ThiC TERM 2022 1701377 - 1701404 + T 100 -12.8 -5.055 | opp_overlap 1701377 CACCCAACGAAAAAA GGGAACAGCACT CAAC AATGCTGTTCCC TTTTTTGAGAGTTCC TERM 2023 1701404 - 1701377 - T 100 -15 -5.28481 | opp_overlap 1701377 CACCCAACGAAAAAA GGGAACAGCACT CAAC AATGCTGTTCCC TTTTTTGAGAGTTCC Paes_1562 1702209 - 1701451 - | Triose-phosphate isomerase Paes_1563 1702436 - 1702212 - | hypothetical protein Paes_1564 1702951 - 1702469 - | transcription elongation factor GreA TERM 2024 1703020 - 1702991 - R 76 -8.5 -3.98944 | opp_overlap 1702994, overlap 1702992 1702994 TAGAAAAGAACAGAA GCAGGACGTTCCC CCTG GGAAACGGCCTGT CGTAACACAAACTAT TERM 2025 1703019 - 1702992 - R 80 -12 -2.97739 | opp_overlap 1702994, overlap 1702991 1702994 AGAAAAGAACAGAAG CAGGACGTTCCC CCTG GGAAACGGCCTG TCGTAACACAAACTA TERM 2026 1703045 - 1703092 + r 80 -8.6 -4.23758 | gap 1, opp_overlap 1703035 1703051 1703054 1703055 1703059, overlap 1703047 1703059 AACTATGTTCATAAC CATAAACAAG-TAAAGTCAGCGC CGG GCGCTGACTTTAACCTGTATGTC TTTTAAATGTACAAT TERM 2027 1703047 - 1703090 + r 91 -11.2 -3.71913 | gap 1, opp_overlap 1703035 1703051 1703054 1703055 1703059, overlap 1703045 1703059 CTATGTTCATAACCA TAAACAAG-TAAAGTCAGCGC CGG GCGCTGACTTTAACCTGTATG TCTTTTAAATGTACA TERM 2028 1703086 - 1703051 - R 100 -16.4 -4.1021 | gap 1, opp_overlap 1703047 1703045 1703059, overlap 1703035 1703054 1703055 1703059 GTTCATAACCATAAA CAAG-TAAAGTCAGCGC CGG GCGCTGACTTTAACCTG TATGTCTTTTAAATG TERM 2029 1703082 - 1703054 - R 100 -14.7 -4.16837 | opp_overlap 1703047 1703045 1703059, overlap 1703051 1703055 1703059 CATAACCATAAACAA GTAAAGTCAGCGC CGG GCGCTGACTTTAA CCTGTATGTCTTTTA TERM 2030 1703081 - 1703055 - R 100 -18.2 -3.09017 | opp_overlap 1703047 1703045 1703059, overlap 1703054 1703051 1703059 ATAACCATAAACAAG TAAAGTCAGCGC CGG GCGCTGACTTTA ACCTGTATGTCTTTT TERM 2031 1703059 - 1703077 + r 100 -14.6 -3.66139 | opp_overlap 1703055 1703054 1703051 1703059, overlap 1703047 1703045 CCATAAACAAGTAAA GTCAGCGC CGG GCGCTGAC TTTAACCTGTATGTC TERM 2032 1703077 - 1703059 - R 100 -14.6 -4.18044 | opp_overlap 1703059 1703047 1703045, overlap 1703055 1703054 1703051 CCATAAACAAGTAAA GTCAGCGC CGG GCGCTGAC TTTAACCTGTATGTC Paes_1565 1704641 - 1703133 - | protease Do TERM 2033 1704605 - 1704580 - G 74 -3.1 -4.98436 | overlap 1704584 TCAATATGAGAAAAA GCAAGCGCGCC AACC AGCACACCGGC GAGCACAAGAAACAA Paes_1566 1706165 - 1704669 - | anthranilate synthase component I Paes_1567 1706226 - 1706735 + | hypothetical protein Paes_1568 1707598 - 1706729 - | signal peptidase I TERM 2034 1707516 - 1707534 + g 71 -3 -4.82548 | opp_overlap 1707510 1707509, overlap 1707509 GCCTCAAACCACTCC CGGGAGTG CTG CTTTCCTG TTTTCTGTATTTTTA TERM 2035 1707728 - 1707750 + r 100 -16.3 -3.42366 | opp_overlap 1707728, overlap 1707721 ACATATAACACAAAA TCGCGCCGG CTCAT CCGGCGCGA TTCTCCCGTTTTGAA TERM 2036 1707750 - 1707728 - R 100 -16.3 -4.77867 | opp_overlap 1707728 1707721 ACATATAACACAAAA TCGCGCCGG CTCAT CCGGCGCGA TTCTCCCGTTTTGAA Paes_1569 1709588 - 1707774 - | GTP-binding protein LepA Paes_1570 1710639 - 1709686 - | methionyl-tRNA formyltransferase TERM 2037 1710028 - 1710052 + g 95 -14.3 -3.32844 | overlap 1710015 TTCCGTCGAGAGTTT CGGCGCTCTGG TTG CCAGAGTGTCG TTCTGCAATAACGGC Paes_1571 1711238 - 1710678 - | peptide deformylase TERM 2038 1711729 - 1711766 + G 75 -4.7 -4.7373 | overlap 1711730 GCTCTACCGCTCACT CCTCCTCAGCCTGATCT TTAT GGTTCAGGCTCAGGCGC TTTTTGCTACGGTCG TERM 2039 1712399 - 1712370 - g 89 -13.1 -3.32424 | gap 1, opp_overlap 1712376, overlap 1712368 1712376 ATCACAGAACCAACA GTGAAAGCAAGCTG ATT CAG-TTGCTTTCAC CCGATCACCTCGCTG TERM 2040 1713190 - 1713173 - g 77 -9.9 -3.65812 | opp_overlap 1713178 1713181, overlap 1713177 GCCCTCGCAACAGAA GGGATCA TGCT TGATCCC AAGCCTGTTGTCAGC Paes_1572 1711694 - 1713340 + | MscS Mechanosensitive ion channel Paes_1573 1713489 - 1714004 + | ferric uptake regulator, Fur family TERM 2041 1714022 - 1714008 - f 81 -11.4 -3.15124 | overlap 1714006 GAAAAGCACTGAATA TGGCCG TTG CGGCCA TTGAAAACCCCATTG Paes_1574 1714052 - 1715305 + | sodium/hydrogen exchanger TERM 2042 1715782 - 1715772 - g 72 -6.8 -4.25104 | TTCTGGTCACCAAAA GCGA CTT TCGC GACCGTCAGCACTAT TERM 2043 1715882 - 1715863 - g 74 -6.4 -4.45544 | gap 1, opp_overlap 1715872 CGTCATCAATGAAAA CGATG-CCG TGT CGGTCACCG AGCTCATGTTTACCG TERM 2044 1716301 - 1716281 - g 81 -6.1 -4.77896 | overlap 1716299 GAAGGAATGGAAAAA GGCGCTG TAACGAT CAACGCC GGCGCGGAAAAAGCC Paes_1575 1715444 - 1716535 + | glutamate 5-kinase Paes_1576 1716557 - 1717816 + | gamma-glutamyl phosphate reductase TERM 2045 1717883 - 1717872 - f 78 -5.8 -4.94972 | CACGATAATCAAAAA GAGG CCCC CCTC AATTGAACAGGAAAA TERM 2046 1718337 - 1718310 - g 91 -11.4 -4.07568 | CTCCGCGGCCGAAAA CGTCGCAATG CCTGAATT CATTGCGACG GGAAAGCTCAAACCT Paes_1577 1717984 - 1718664 + | ABC transporter related TERM 2047 1719420 - 1719406 - g 77 -8.6 -4.07568 | opp_overlap 1719396, overlap 1719418 GCCCTGCGCTCAAAA CGCTTT TGC AAAGCG GACTCGTCGCAGCCA TERM 2048 1719637 - 1719649 + G 71 -9.1 -3.53811 | CGCCTCTGATCGGCC CGGTC ATT GACCG TTTCAACCGGGTCAG Paes_1578 1718727 - 1720043 + | major facilitator superfamily MFS_1 Paes_1579 1720040 - 1721485 + | UDP-N-acetylmuramate TERM 2049 1721640 - 1721654 + G 70 -5.7 -4.40561 | GCATTAACGGATTCG GACGT ATCGG ACGTC TTGTTTTTCGCCAGG Paes_1580 1721606 - 1722610 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 2050 1722664 - 1722623 - f 72 -8.2 -3.9712 | opp_overlap 1722636, overlap 1722628 1722636 TGATTCTATCAGAAA CACAATAAAAAAAGGGGC TTTGAG GCCCCTTTTTTTATTCCC GGTGCACATCGCCAT TERM 2051 1722659 - 1722628 - f 100 -14.7 -3.91882 | opp_overlap 1722636, overlap 1722623 1722636 CTATCAGAAACACAA TAAAAAAAGGGGC TTTGAG GCCCCTTTTTTTA TTCCCGGTGCACATC TERM 2052 1722636 - 1722651 + F 100 -8.2 -5.7946 | opp_overlap 1722628 1722623 1722636 AACACAATAAAAAAA GGGGCT TTGA GGCCCC TTTTTTTATTCCCGG TERM 2053 1722651 - 1722636 - f 100 -7.5 -5.94214 | opp_overlap 1722636, overlap 1722628 1722623 AACACAATAAAAAAA GGGGC TTTGAG GCCCC TTTTTTTATTCCCGG Paes_1581 1722785 - 1723432 + | Proto-chlorophyllide reductase 57 kD subunit TERM 2054 1723483 - 1723442 - T 100 -19 -4.62069 | opp_overlap 1723454, overlap 1723443 1723454 GGTTGATCTGAAAAA GGCATAAAAAAAGCCCCG TTTTCC CGGGGCTTTTTTTATGCT CGGCATGCATCACGC TERM 2055 1723482 - 1723443 - T 100 -22.5 -3.3692 | opp_overlap 1723454, overlap 1723442 1723454 GTTGATCTGAAAAAG GCATAAAAAAAGCCCCG TTTTCC CGGGGCTTTTTTTATGC TCGGCATGCATCACG TERM 2056 1723454 - 1723471 + T 100 -9.8 -5.67063 | opp_overlap 1723443 1723442 1723454 AAAGGCATAAAAAAA GCCCCG TTTTCC CGGGGC TTTTTTTATGCTCGG TERM 2057 1723471 - 1723454 - T 100 -9.8 -5.68039 | opp_overlap 1723454, overlap 1723443 1723442 AAAGGCATAAAAAAA GCCCCG TTTTCC CGGGGC TTTTTTTATGCTCGG Paes_1582 1724686 - 1723499 - | chaperone protein DnaJ TERM 2058 1724192 - 1724204 + g 71 -3.3 -4.87626 | opp_overlap 1724193, overlap 1724193 GCCGTTACAAACATC ACAGG CCA CCTGC TTTTTGATCTTCAGC TERM 2059 1724359 - 1724349 - G 88 -8.2 -4.67038 | opp_overlap 1724349, overlap 1724344 TCCTCAAAACCAAAA GGCG ATC CGCC GCCTCTTGCCCCGCC Paes_1583 1725352 - 1724732 - | GrpE protein Paes_1584 1726438 - 1725371 - | heat-inducible transcription repressor HrcA TERM 2060 1725902 - 1725877 - G 74 -10.5 -3.1506 | overlap 1725892 AAAGTCGCTGATTAA GCAGATCGACA ACCA TCTCGATCTGC CGGCGGGAAACATCG Paes_1585 1727502 - 1726609 - | protein-(glutamine-N5) methyltransferase, release factor-specific Paes_1586 1727752 - 1728492 + | hypothetical protein TERM 2061 1729299 - 1729289 - g 90 -4.6 -5.31877 | overlap 1729290 1729291 ATGCAGGACAAAAAA GCCC TGC AGGC AGGAACATCTCACAA Paes_1587 1728629 - 1730074 + | prolyl-tRNA synthetase TERM 2062 1730125 - 1730085 - T 100 -22.1 -4.09864 | opp_overlap 1730085 ACTGACCGCTCAAAA CGCTAAAGCCCGTTTCCTT CAG AGGGAAACAGGCTTTAGCG TTTTTGCACGCACCA TERM 2063 1730085 - 1730125 + T 100 -22.1 -4.56597 | opp_overlap 1730085 ACTGACCGCTCAAAA CGCTAAAGCCCGTTTCCTT CAG AGGGAAACAGGCTTTAGCG TTTTTGCACGCACCA Paes_1588 1730756 - 1730166 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Paes_1589 1730952 - 1732256 + | Xanthine/uracil/vitamin C permease Paes_1590 1732253 - 1733128 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Paes_1591 1734028 - 1733168 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2064 1734626 - 1734615 - g 71 -3 -4.77173 | TGCGGACAAAAGAAA GTTT CAAA AAAC GCAGCGATGCTGCAT TERM 2065 1734647 - 1734626 - g 95 -9.5 -5.07107 | gap 1, overlap 1734627 1734628 1734630 GAAAGTTTCAAAAAA CGCAGCGATG CTG CATCGCTG-G CAGCAAAACTCTCAA TERM 2066 1734647 - 1734627 - g 77 -9.7 -3.6318 | overlap 1734626 1734628 1734630 AAAGTTTCAAAAAAC GCAGCGATG CTG CATCGCTGG CAGCAAAACTCTCAA TERM 2067 1734646 - 1734628 - g 81 -13.2 -2.76823 | overlap 1734626 1734627 1734630 AAGTTTCAAAAAACG CAGCGATG CTG CATCGCTG GCAGCAAAACTCTCA Paes_1592 1734110 - 1734691 + | Sporulation domain protein TERM 2068 1735228 - 1735218 - g 91 -5.4 -5.40474 | AGTTGCCGAAAAAAA CTTC CGG GAAG ACCTCTACTATCGGC Paes_1593 1734742 - 1735878 + | sigma54 specific transcriptional regulator, Fis family Paes_1594 1737517 - 1735904 - | apolipoprotein N-acyltransferase TERM 2069 1736633 - 1736607 - G 72 -5 -4.67556 | ACAATATCTGAAAAA CCGGTAAGAAGC GCA GCATCCCATCGG CGTACCCTCTTGCTG TERM 2070 1737177 - 1737164 - G 75 -4.5 -4.77629 | gap 1, overlap 1737166 1737173 AAAAGGAAGAGAAAA GAGCGC AAA GCGC-C AGCCACGCAACTGTT TERM 2071 1737176 - 1737166 - G 74 -8.2 -3.97283 | overlap 1737164 1737173 AAGGAAGAGAAAAGA GCGC AAA GCGC CAGCCACGCAACTGT TERM 2072 1737468 - 1737438 - G 70 -4.7 -4.4773 | gap 1, overlap 1737442 1737456 GGATATGAAGGAAAA CTGATGCCCAGAAG CACA CCACTGAGCA-CAG CAGACAGATAACCGG Paes_1595 1737763 - 1738866 + | bacteriochlorophyll A protein TERM 2073 1738917 - 1738890 - T 90 -12.8 -3.32468 | opp_overlap 1738895, overlap 1738895 AAAAGAACAGTAACA GAAAAGCCGGCA GTCA TGCCGGCTTTTT TTGTCTCTCTCTCAA TERM 2074 1738912 - 1738895 - T 100 -12.7 -4.73094 | opp_overlap 1738895, overlap 1738890 AACAGTAACAGAAAA GCCGGCA GTCA TGCCGGC TTTTTTTGTCTCTCT TERM 2075 1738895 - 1738912 + T 100 -12.7 -5.77988 | opp_overlap 1738890 1738895 AACAGTAACAGAAAA GCCGGCA GTCA TGCCGGC TTTTTTTGTCTCTCT Paes_1596 1739349 - 1738948 - | transcriptional regulator, MerR family TERM 2076 1739624 - 1739640 + G 90 -9.4 -4.55446 | TCTCTATGTGCTCTT TGCCGC GCTCA GCGGCA TTTTCCTCTTTCTTG TERM 2077 1739994 - 1739980 - g 100 -4.2 -5.66684 | CAATGCAGAAAAAAA CCAGAA GCA TTCAGG AAAGCTACGCAGGCA TERM 2078 1740909 - 1740873 - g 77 -6.6 -4.52873 | gap 1 GGGGGACAAAAACAA CGAACCTGCATCGCCAG AGCT CTGGC-ATGGAAGCCCG AAATTCTTGTGCTCG Paes_1597 1739430 - 1741181 + | ABC transporter related Paes_1598 1742611 - 1741178 - | Radical SAM domain protein TERM 2079 1741330 - 1741309 - G 81 -12.3 -3.21099 | gap 1, opp_overlap 1741325 GCGTCGGAGCAGCAA GCGCACGGCG AAT CGCC-TGCGC CGGAGTAAAAATCCT TERM 2080 1742548 - 1742533 - G 70 -6.2 -4.15222 | AGCCGTTTGAAGAAA CATCTT TCTG AAGATG CGCCGGCCCGTCGGT Paes_1599 1745261 - 1742634 - | DNA mismatch repair protein MutS TERM 2081 1744647 - 1744663 + g 100 -5.1 -5.59357 | opp_overlap 1744643 1744646 CTGAAGCGAAACCAG TACTCCC GGA GGAAGTA TTTTTTTGATCTCAT TERM 2082 1744813 - 1744829 + g 79 -4.3 -5.00884 | overlap 1744809 1744816 ATAAAAGCAATTCCA GCACGCT GTT GGCGTCC TTTTTTCAGAAAACT Paes_1600 1745425 - 1745862 + | hypothetical protein Paes_1601 1746019 - 1746309 + | ribosomal protein L21 Paes_1602 1746350 - 1746604 + | ribosomal protein L27 TERM 2083 1746643 - 1746665 + F 100 -4.8 -5.63103 | opp_overlap 1746634 1746643 AGAGTATATTGAGAA TAGCCGAC CTTTAGT GCCGGCTA TTTTTTTGCTTACCA TERM 2084 1746695 - 1746721 + F 91 -13.1 -3.2614 | opp_overlap 1746694 1746693, overlap 1746698 AGAAAGCATAGAATT TGATCCGCTGC CGCCT GCAGCGGATTA TTAATATCCACACTG TERM 2085 1746698 - 1746718 + F 100 -12.6 -3.7732 | opp_overlap 1746694 1746693, overlap 1746695 AAGCATAGAATTTGA TCCGCTGC CGCCT GCAGCGGA TTATTAATATCCACA Paes_1603 1746758 - 1747690 + | malate dehydrogenase, NAD-dependent TERM 2086 1747730 - 1747746 + T 100 -9.4 -5.57729 | opp_overlap 1747730 CCTGACACATGCAAA GCGGTC ATCCA GACCGC TTTTTTCTATTCTTT TERM 2087 1747746 - 1747730 - T 79 -9.4 -3.74077 | opp_overlap 1747730 CCTGACACATGCAAA GCGGTC ATCCA GACCGC TTTTTTCTATTCTTT TERM 2088 1747802 - 1747819 + T 100 -12.7 -5.7946 | opp_overlap 1747802 AAAAGCATAAAAAAA GCGACCG GTTA CGGTCGC TTTTTTTGTTGAGCA TERM 2089 1747819 - 1747802 - T 100 -12.7 -5.77632 | opp_overlap 1747802 AAAAGCATAAAAAAA GCGACCG GTTA CGGTCGC TTTTTTTGTTGAGCA TERM 2090 1748126 - 1748143 + T 100 -12.7 -5.44119 | opp_overlap 1748126 CTGGAAATAAAAAAA GCGACCG GTTG CGGTCGC TTTTTTTAAAGTGAG TERM 2091 1748143 - 1748126 - T 100 -12.7 -5.95539 | opp_overlap 1748126 CTGGAAATAAAAAAA GCGACCG GTTG CGGTCGC TTTTTTTAAAGTGAG TERM 2092 1748362 - 1748329 - T 100 -14.1 -5.86976 | GCAGAAAACAAAAAA TGTCTCAATACGAGA ACTT TCCCATATTGAGACA CTAACGTCTCACAAT Paes_1604 1749440 - 1748394 - | Agmatine deiminase Paes_1605 1750688 - 1749450 - | Ste24 endopeptidase TERM 2093 1750698 - 1750682 - G 71 -2.3 -4.93316 | TAATAACACCAAAAA CATTCAT ACC ATCAATG GATTTGCTGGTCAAC Paes_1606 1751015 - 1750752 - | hypothetical protein Paes_1607 1752241 - 1751069 - | Na+/Picotransporter TERM 2094 1751438 - 1751421 - G 75 -11.3 -2.97017 | overlap 1751416 AACGGCACAATCAGA CTCGTCG TCGT CGACGAG GACTGAACGAGAACC Paes_1608 1753186 - 1752314 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Paes_1609 1754114 - 1753191 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2095 1753480 - 1753495 + g 79 -10.4 -3.74077 | GGAAGGGTCATCTTT CCGACC TTAC GGTCGG TTTCAATATCTCGAA TERM 2096 1754100 - 1754113 + g 71 -3.1 -4.8277 | AGTGGAAGAATGATC TGACT GCAT GGTCA TTATTTTTTCTCTTT Paes_1610 1755160 - 1754114 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Paes_1611 1755521 - 1755198 - | hypothetical protein TERM 2097 1756264 - 1756214 - g 70 -3.9 -4.72486 | gap 1 CACAAAGTCGAAAAA CTCGGTGCAGGCGAAATCC-TGCT CACC AGCATGGACCGCGACGGAACCAAG TCAGGCTACGATAAT Paes_1612 1755728 - 1756483 + | imidazoleglycerol phosphate synthase, cyclase subunit Paes_1613 1757019 - 1756507 - | NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 TERM 2098 1756670 - 1756658 - G 77 -6.3 -4.69656 | overlap 1756648 1756660 AATGAGGGAATAAAA TTCTC GAA GAGAA GCTCTCTATCGACCC TERM 2099 1756811 - 1756799 - G 100 -3.3 -5.65177 | overlap 1756800 ACACGCAGAAAAAAA CCGGT TGA ACCGC TGAAGTCATTTTCGG Paes_1614 1757209 - 1757679 + | hypothetical protein Paes_1615 1758053 - 1757805 - | hypothetical protein Paes_1616 1758522 - 1758217 - | Rieske (2Fe-2S) domain protein TERM 2100 1758542 - 1758553 + r 100 -4.4 -5.93252 | TTCAAAATCAGCGAT TGGT TAAA ACCA TTTTTTCTTTTTGAA Paes_1617 1759609 - 1758545 - | magnesium and cobalt transport protein CorA TERM 2101 1758938 - 1758952 + g 79 -4.2 -5.05782 | opp_overlap 1758940, overlap 1758940 CCAGGTGGATTTACG AAGCTG GAT CAGCTC TTTTTTCAGATCGCT TERM 2102 1758940 - 1758950 + g 72 -6.8 -4.15748 | opp_overlap 1758940, overlap 1758938 AGGTGGATTTACGAA GCTG GAT CAGC TCTTTTTTCAGATCG Paes_1618 1760714 - 1759659 - | hypothetical protein Paes_1619 1761738 - 1760761 - | Na+/Ca+ antiporter, CaCA family Paes_1620 1764489 - 1762093 - | Phosphoketolase TERM 2103 1762803 - 1762816 + g 74 -2.3 -5.06414 | GCGGAAGATAGACAC GGATG ACAT CAGCC TTTTTATTGACAACA Paes_1621 1765760 - 1764579 - | acetate kinase TERM 2104 1765801 - 1765813 + H 77 -9.1 -3.74361 | opp_overlap 1765799 CTGACAAAGGAATCT GGCAG CAC CTGCC TTCTTGATCAATCTA Paes_1622 1766073 - 1766279 + | hypothetical protein TERM 2105 1766316 - 1766304 - f 90 -4.7 -5.53288 | opp_overlap 1766308 1766311, overlap 1766305 GCCAACCTAAAAAAA CCCGG TAC CCGGC AGAAGAGGCTTATGG TERM 2106 1766315 - 1766305 - f 72 -8.2 -3.90888 | opp_overlap 1766308 1766311, overlap 1766304 CCAACCTAAAAAAAC CCGG TAC CCGG CAGAAGAGGCTTATG Paes_1623 1766443 - 1766979 + | hypoxanthine phosphoribosyltransferase TERM 2107 1767775 - 1767752 - g 81 -9 -4.06864 | gap 1 CTGACAGAATAAGAA TTGCCGATACC GTT GGTATCG-CAA CGCCGCTGCATCTCA TERM 2108 1767827 - 1767817 - g 100 -2.4 -5.84381 | TCACGAATAAAAAAA GCTG TTC CCGC TACACTTGAATTTCA TERM 2109 1767906 - 1767916 + G 72 -6.8 -4.1891 | opp_overlap 1767895, overlap 1767895 GGAAGCCGGCTGCGA CGCT GTC AGCG TTTCTGTTACCGGGC Paes_1624 1767235 - 1768407 + | pyruvate carboxyltransferase TERM 2110 1768879 - 1768867 - g 82 -9.1 -4.2361 | AAGAGAATGGCAAAA CGCTC CAG GAGCG TGAGGATGAGAGCAT Paes_1625 1768398 - 1770032 + | transcriptional regulator, NifA subfamily, Fis Family Paes_1626 1770493 - 1770089 - | large conductance mechanosensitive channel protein Paes_1627 1771033 - 1771857 + | nitrogenase iron protein Paes_1628 1771879 - 1772235 + | nitrogen regulatory protein P-II Paes_1629 1772235 - 1772612 + | nitrogen regulatory protein P-II Paes_1630 1772647 - 1774275 + | nitrogenase molybdenum-iron protein alpha chain TERM 2111 1774358 - 1774320 - g 83 -5.3 -5.05601 | gap 2, overlap 1774322 1774324 TACGACACACAAAAA CTGAGGTGATGG--AGCGC GAA GCGCTGACCATCAACCCCG CAAAAACATGCCAGC TERM 2112 1774379 - 1774415 + G 89 -13.8 -3.15544 | gap 1 ACATGCCAGCCGATC GGC-GCTATGTATGCCG CTCT CGGCATACACGGCTGCC TTCCTCACAGTCACG Paes_1631 1774298 - 1775680 + | nitrogenase molybdenum-iron protein beta chain TERM 2113 1775889 - 1775939 + G 95 -15.5 -3.01712 | gap 1, overlap 1775879 1775891 GCCCTTCATGTAGTT CATGGTCCTATCGGATGTGCCGCG TATA CGTGGGACATCCGG-GGGGCCGTG TCTTCCGGCCCGGAA TERM 2114 1775891 - 1775937 + G 79 -12.3 -3.06696 | gap 1, overlap 1775879 1775889 CCTTCATGTAGTTCA TGGTCCTATCGGATGTGCCGCG TATA CGTGGGACATCCGG-GGGGCCG TGTCTTCCGGCCCGG TERM 2115 1776148 - 1776135 - g 83 -5.3 -5.08824 | opp_overlap 1776141 GCGGTATGTAAAAAA GTTTC ACAG GAAAC CGGCATTCCTGTTCT TERM 2116 1776218 - 1776201 - g 100 -9.1 -5.68039 | AAAGGCACAAAAAAA GACGGCT ATAA AGCCGCC TGTGACTCACTGATG Paes_1632 1775706 - 1777067 + | nitrogenase MoFe cofactor biosynthesis protein NifE Paes_1633 1777064 - 1778434 + | Nitrogenase TERM 2117 1778750 - 1778733 - g 72 -7.7 -3.91946 | gap 1, opp_overlap 1778737 1778745 AAGAAACAATGGAAA CCCTG-CG GCT CGTCAGGG AAAAATACCCGGATA TERM 2118 1779571 - 1779560 - g 74 -2.2 -5.03145 | GAATCTCCGAAAAAA GTCC TCGT GAAC AACGGTATCGACGTC Paes_1634 1778447 - 1779721 + | nitrogenase cofactor biosynthesis protein NifB Paes_1635 1779775 - 1780086 + | ferredoxin, 2Fe-2S TERM 2119 1780122 - 1780133 + F 87 -5.8 -5.41143 | opp_overlap 1780122, overlap 1780099 1780113 ACCGCCGGTTGAAAA GGGT TTTA ACCC TTTTTTTCCGGCCTG TERM 2120 1780380 - 1780353 - g 93 -9.8 -4.5032 | opp_overlap 1780360 1780365 GATATGAACAACAAA CCGAAAACTCCG TAGC CGGGGTATTCGG CAATATGTATCAGAT TERM 2121 1780434 - 1780450 + G 76 -3.7 -5.02074 | GCAAAGTCTGTCTGG TTTTCGG TGA CAGAAAA TTTTTTGACCGCTCA TERM 2122 1780750 - 1780724 - g 70 -4.4 -4.46926 | TATCTGATCACAAAA GAGATAGACGCA GGC TTCATCAATCTC ACCGATGCCATAGGA Paes_1636 1780208 - 1780936 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Paes_1637 1780936 - 1781628 + | binding-protein-dependent transport systems inner membrane component Paes_1638 1781745 - 1782554 + | transcriptional regulator, ModE family Paes_1639 1784613 - 1782583 - | histidine kinase TERM 2123 1783763 - 1783794 + g 74 -2.2 -5.04385 | gap 1, overlap 1783783 AGAAATTCACTTTTA GC-CTTGTTGGCGCT CTC AGCCTCGACACGCGC TTTTTTGAGGGTATC Paes_1640 1785922 - 1784885 - | hydrogenase expression/formation protein HypE Paes_1641 1787044 - 1785950 - | hydrogenase expression/formation protein HypD Paes_1642 1787369 - 1787109 - | hydrogenase assembly chaperone hypC/hupF Paes_1643 1789952 - 1787616 - | (NiFe) hydrogenase maturation protein HypF TERM 2124 1788275 - 1788230 - GR 73 -9.1 -3.51793 | gap 1, opp_overlap 1788235, overlap 1788228 CATAAGTATGAAACA GGT-ATCCCGCAGCGGCTTTCC ACG GAAAAAGCGCTGCACGATCACC TCCGGGCATCCGGAC TERM 2125 1788573 - 1788563 - GR 70 -4 -4.67904 | overlap 1788565 GACGAACCTGAAAAA TATG CTG CATA TGCTCAGCAACTTGC Paes_1644 1790725 - 1789913 - | hydrogenase accessory protein HypB Paes_1645 1791251 - 1790910 - | hydrogenase nickel insertion protein HypA TERM 2126 1791609 - 1791629 + G 86 -6.7 -5.02074 | opp_overlap 1791609 CGCCCATCGCTCAAA GGCAAGCGC ATC GCACTCGCC TTTTTTGAAAACTCA TERM 2127 1791629 - 1791609 - g 78 -11.1 -3.55444 | opp_overlap 1791609 CGCCCATCGCTCAAA GGCAAGCGC ATC GCACTCGCC TTTTTTGAAAACTCA Paes_1646 1791486 - 1792424 + | aspartate carbamoyltransferase Paes_1647 1792561 - 1793418 + | hypothetical protein TERM 2128 1793477 - 1793434 - T 85 -11.9 -3.39005 | gap 2 CAGAGAATCGTAGAA TTGCGGGACGACCTCTCCTGA GTCA TC-GGAAAGGTCGTCC-GCTA TCAGATCCTTCAGAA Paes_1648 1793931 - 1793413 - | NUDIX hydrolase TERM 2129 1794036 - 1794022 - H 72 -7.1 -4.03234 | CGCCTTTCACAGAAA GCAGC AAACA GCTGC ACAACCATAGAACCT TERM 2130 1794202 - 1794227 + H 100 -6.1 -5.88565 | opp_overlap 1794202, overlap 1794204 GTTCTTTCCTGAAAA GCCTTTCCTGT CCTT ACGGGGAAGAC TTTTTTTATTCTCGA Paes_1649 1794276 - 1795373 + | hypothetical protein TERM 2131 1795407 - 1795430 + F 100 -14.6 -5.626 | opp_overlap 1795407 TTGCACGGTTCAAAA GCCGCAATCC TTCC GGGTTGCGGC TTTTTTTATACGCTG TERM 2132 1795430 - 1795407 - f 100 -12.4 -4.09685 | opp_overlap 1795407 TTGCACGGTTCAAAA GCCGCAATCC TTCC GGGTTGCGGC TTTTTTTATACGCTG TERM 2133 1795507 - 1795490 - f 82 -7.1 -4.64766 | TTGAGACGCGAAAAA CATTAAC TATC GTTAATG AAGTATTTTAGAAAA TERM 2134 1795551 - 1795568 + F 83 -4.2 -5.40072 | ATTAAATTGTGATGT GTCTTT TCTGAT AAAGAC TTTTTTTAACGACCC Paes_1650 1795600 - 1795857 + | hypothetical protein Paes_1651 1795914 - 1797686 + | Na+/solute symporter TERM 2135 1797736 - 1797704 - f 100 -17.9 -3.96216 | opp_overlap 1797705 1797711, overlap 1797706 1797711 CTGGGACCGAAACAA CACAAAAGGCGCGTT TTC AACGCGCCTTTTGCA TTTCCCGCCCCCCCT TERM 2136 1797705 - 1797735 + F 100 -17 -2.71712 | opp_overlap 1797704 1797706 1797711, overlap 1797711 TGGGACCGAAACAAC ACAAAAGGCGCGTT TTC AACGCGCCTTTTGC ATTTCCCGCCCCCCC TERM 2137 1797734 - 1797706 - f 100 -20.5 -3.57185 | opp_overlap 1797705 1797711, overlap 1797704 1797711 GGGACCGAAACAACA CAAAAGGCGCGTT TTC AACGCGCCTTTTG CATTTCCCGCCCCCC TERM 2138 1797711 - 1797729 + F 100 -14.6 -4.35524 | opp_overlap 1797706 1797704 1797711, overlap 1797705 CGAAACAACACAAAA GGCGCGTT TTC AACGCGCC TTTTGCATTTCCCGC TERM 2139 1797729 - 1797711 - f 100 -14.6 -4.84673 | opp_overlap 1797711 1797705, overlap 1797706 1797704 CGAAACAACACAAAA GGCGCGTT TTC AACGCGCC TTTTGCATTTCCCGC TERM 2140 1799067 - 1799029 - g 75 -4.4 -4.77757 | overlap 1799031 GGTGAAAAAGCAAAA CTGGTGGCAATGTGCATC GAC AATGCCCGCCACCACCTG GAAGAGTATCTCATT Paes_1652 1797946 - 1799796 + | excinuclease ABC, C subunit TERM 2141 1799819 - 1799788 - f 100 -6.6 -5.626 | gap 1, opp_overlap 1799799 1799814, overlap 1799790 TATTTCAGAAAAAAA CAGCCGTAAAAGGCC GCT GACCTGTT-CGGCTA TCCAGCTGTTCTGCC TERM 2142 1799817 - 1799790 - f 77 -7 -4.45201 | gap 1, opp_overlap 1799799 1799814, overlap 1799788 TTTCAGAAAAAAACA GCCGTAAAAGGCC GCT GACCTGTT-CGGC TATCCAGCTGTTCTG Paes_1653 1799988 - 1801388 + | TPR repeat-containing protein TERM 2143 1801510 - 1801491 - g 89 -13.6 -3.24924 | overlap 1801489 CTTTTATCCACAACA CCGCAGCA GAAA TGCTGCGG CTCCCGTTTTATTAT Paes_1654 1801415 - 1802287 + | Shikimate dehydrogenase substrate binding domain protein TERM 2144 1802846 - 1802866 + G 86 -6.9 -5.00884 | overlap 1802834 TAGGCGCATTCATGC TGCTGCTAT GGC ATAACAGCA TTTTTTCAGACAGCT Paes_1655 1802389 - 1802883 + | lipoprotein signal peptidase TERM 2145 1803346 - 1803362 + G 70 -4.3 -4.57569 | CGCCACTCTGACCTT CGGGGCA TCA TGCACTG TTTTTCCGGAGATGC Paes_1656 1802899 - 1803708 + | hydrolase, TatD family Paes_1657 1803873 - 1804574 + | tetratricopeptide TPR_2 repeat protein Paes_1658 1804597 - 1805091 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2146 1805238 - 1805213 - g 88 -5.3 -5.26119 | overlap 1805214 1805215 GTCTCAAAAACAAAA CCGGCCTCTCT TATC AGGGAGGCCTA CGATGCAGGCCAGAT Paes_1659 1805099 - 1805788 + | alanine racemase domain protein Paes_1660 1805950 - 1807164 + | aminotransferase class I and II Paes_1661 1807199 - 1808020 + | purine nucleoside phosphorylase I, inosine and guanosine-specific TERM 2147 1808188 - 1808174 - g 71 -2.1 -4.91712 | gap 1 TCGAAGCGATAAAAA CACTGG CTGT CC-GTG GTGCACCACTGATCG Paes_1662 1808053 - 1809114 + | translation initiation factor, aIF-2BI family TERM 2148 1809142 - 1809166 + F 100 -14.3 -5.71983 | opp_overlap 1809142 TCTCCGTCGTAAAAA GGCAGGGTGCA TGA TGCAGCCTGCC TTTTTTTGTGATTCG TERM 2149 1809166 - 1809142 - f 100 -14.3 -4.56597 | opp_overlap 1809142 TCTCCGTCGTAAAAA GGCAGGGTGCA TGA TGCAGCCTGCC TTTTTTTGTGATTCG Paes_1663 1809338 - 1810711 + | cytochrome bd ubiquinol oxidase subunit I TERM 2150 1811308 - 1811297 - g 81 -4.4 -5.14563 | GGCTTCAGGAAAAAA CGAT GTCC ATCG CAAAAAAAGCATGGG TERM 2151 1811330 - 1811317 - g 85 -3.1 -5.44119 | gap 1 TCCATCGCAAAAAAA GCATGG GCA CCA-GC CACCCTGCTCTCACT TERM 2152 1811438 - 1811449 + G 71 -2.2 -4.91109 | overlap 1811416 TCAGCGTCATCGCGC TGGC ATCG GTCA TTTTTCTGCTGAAAA Paes_1664 1810714 - 1811736 + | cytochrome d ubiquinol oxidase, subunit II TERM 2153 1811755 - 1811796 + F 89 -14.1 -3.01912 | gap 1, opp_overlap 1811765, overlap 1811757 ACAACCACCTTTTTT TATCAGTATACTTGCCGAAA TCG TTACG-CAAGTATACTGATA TCTCTGTCCATCTCC TERM 2154 1811757 - 1811794 + F 83 -12.3 -3.06261 | gap 1, opp_overlap 1811765, overlap 1811755 AACCACCTTTTTTTA TCAGTATACTTGCCGAAA TCG TTACG-CAAGTATACTGA TATCTCTGTCCATCT Paes_1665 1811891 - 1813627 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD TERM 2155 1813786 - 1813812 + G 70 -3.6 -4.59773 | CCGTCGTTCCATGAA CTTCAGATCGCC ATT GTCGGTGTGAGG TTTTTCGGCATCGCA TERM 2156 1815291 - 1815254 - g 90 -15.1 -2.83345 | gap 1, opp_overlap 1815266, overlap 1815251 1815265 TTGACAGAGGAACCA TCGTCGAAGAAGGTTCGC ACA GCGA-CCTTCTTCAACAA AAAGGAATCTACTCA Paes_1666 1813624 - 1815354 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC Paes_1667 1815913 - 1815389 - | Lipocalin family protein Paes_1668 1816838 - 1815960 - | formyltetrahydrofolate deformylase TERM 2157 1816551 - 1816541 - G 81 -8.2 -4.3467 | opp_overlap 1816541 ACTTCGATACGAAAA GCGC AAC GCGC TCTCTGGTCTCGGCC TERM 2158 1817323 - 1817307 - g 100 -3 -5.61596 | gap 1 ATCTTCAGAAAAAAA GATGACC GTAA GG-CATC ACAAGGTCTGTTGCT Paes_1669 1817094 - 1817702 + | phosphoesterase PA-phosphatase related TERM 2159 1818329 - 1818342 + G 74 -3.1 -4.95876 | gap 1 CGATATTCAATCCTT CAG-GC ATC GCACTG TTTTTGCTTATCGTT TERM 2160 1818725 - 1818712 - g 93 -2.3 -5.70829 | opp_overlap 1818685 AAGACGATAAAAAAA CCATG GCTG CTTGG AATCTGGCCCGCTCT Paes_1670 1817692 - 1819236 + | glycosyl transferase family 39 Paes_1671 1819247 - 1820179 + | glycosyl transferase family 2 TERM 2161 1820435 - 1820450 + G 70 -6.2 -4.16842 | GCTCTACTACGTAGG CATGTT CTAC AACATG TTTCTTCCCGGTGGA TERM 2162 1820544 - 1820507 - g 100 -2.2 -5.76949 | gap 1, opp_overlap 1820508, overlap 1820508 CATTCTCAAAAAAAA TCACAGCAT-GAAAA TGGTCAATG TTTTCAATGCTGTGT TCTGGGACCGTGTGG Paes_1672 1820166 - 1821077 + | hypothetical protein Paes_1673 1822826 - 1821114 - | single-stranded-DNA-specific exonuclease RecJ Paes_1674 1823034 - 1824032 + | Inositol phosphatase/fructose-16-bisphosphatase TERM 2163 1824151 - 1824141 - g 100 -3.2 -5.78622 | GTATGGGAAAAAAAA CAGC TAC GCTA TTATTTATCGGTGAT Paes_1675 1824128 - 1824946 + | metallophosphoesterase TERM 2164 1825926 - 1825915 - g 70 -5.8 -4.258 | TCATCCATGAAGAAA TGCC CGTC GGCA GCAGCAGAGGCGGCA Paes_1676 1825596 - 1826468 + | Pirin domain protein TERM 2165 1826839 - 1826861 + T 100 -14.8 -3.54741 | opp_overlap 1826839 CCATTCAAAAAAAAA GCCCCCCGGA AAA TCCGGGAGGC TTTGCAAGCATCATA TERM 2166 1826861 - 1826839 - T 100 -17 -6.11644 | opp_overlap 1826839 CCATTCAAAAAAAAA GCCCCCCGGA AAA TCCGGGAGGC TTTGCAAGCATCATA Paes_1677 1829111 - 1826892 - | isocitrate dehydrogenase, NADP-dependent TERM 2167 1827629 - 1827647 + g 72 -8.9 -3.85698 | opp_overlap 1827628 1827632, overlap 1827632 CTTTTTCAATCAACT GAACGTG ATGAG CACGTTC TTTGTCAAGCCAGAA TERM 2168 1827899 - 1827930 + g 73 -3.6 -4.84761 | opp_overlap 1827899 GACCGACGTTGGAAA CGCTGCCCATGGTG GAAA CATCATAAGCACCG TTTTTCTGACAATCT Paes_1678 1830354 - 1829455 - | Enoyl-(acyl-carrier-protein) reductase (NADH) TERM 2169 1829900 - 1829883 - G 72 -7.7 -3.94936 | AAGCAATATACGAAA GAGCAAG AACG CTTGCCC CATCATTGAGCGCAT Paes_1679 1831761 - 1830457 - | arsenite-activated ATPase ArsA TERM 2170 1831521 - 1831537 + g 88 -2.2 -5.50499 | CATAGATCGTATCGA CCTCAA GTCCA TAGAGG TTTTTTTCAATCTGC TERM 2171 1831835 - 1831821 - R 77 -11.4 -2.79749 | overlap 1831820 1831823 CACTCCTAACAGAAT CAGCCG CGC CGGCTG TAAAGCATAAAAAGT Paes_1680 1832450 - 1831866 - | leucyl/phenylalanyl-tRNA/protein transferase Paes_1681 1833511 - 1832468 - | hypothetical protein Paes_1682 1835792 - 1833561 - | UvrD/REP helicase Paes_1683 1836438 - 1836091 - | transcriptional coactivator/pterin dehydratase TERM 2172 1836312 - 1836300 - G 74 -3.3 -5.02231 | CAAAAACACGAAAAA GGCGT CCG ACTCC CTCAGGCCTCACGAC TERM 2173 1836429 - 1836415 - G 74 -2.1 -5.15117 | TAAAAGGTGAAAAAA TATCG CCCCC CGACA GCCGGACAAAGGCAA Paes_1684 1837911 - 1836466 - | alpha amylase catalytic region TERM 2174 1836525 - 1836558 + g 79 -12.7 -3.10164 | overlap 1836527 CTCTGACCCGATGCT CATCAGCAACAAAAT CAAT ATTTTTTTGCTGATG TTGAGTACTGAATAC Paes_1685 1838117 - 1838542 + | protein of unknown function UPF0047 TERM 2175 1838725 - 1838758 + TF 71 -8.9 -3.30243 | gap 1, overlap 1838733 1838734 CGTTACCCGTTACCC GTTACCAGTTTGCGCC AAA GGCGC-AACTTGTCAC TTGTCACGCGTCACT TERM 2176 1838733 - 1838751 + TF 71 -8.8 -3.45054 | overlap 1838725 1838734 GTTACCCGTTACCAG TTTGCGCC AAA GGCGCAAC TTGTCACTTGTCACG TERM 2177 1838734 - 1838750 + TF 81 -12.3 -2.66711 | overlap 1838733 1838725 TTACCCGTTACCAGT TTGCGCC AAA GGCGCAA CTTGTCACTTGTCAC TERM 2178 1839728 - 1839713 - gT 72 -5.4 -4.5123 | gap 1, overlap 1839714 AAGCCATGAAAGAAA TGCAGGC ACT GCC-GCA TCCAAAGCTGCTCCA TERM 2179 1839772 - 1839760 - gT 100 -3.4 -5.67063 | overlap 1839767 GTCATCACAAAAAAA GGAA AAGGG TTCC TGCCGGCAGAGCAGA TERM 2180 1840057 - 1840085 + GT 70 -9.6 -2.94595 | gap 1 TTTGCCGCAGGTCTG GCTGCACACGGTT ATAA ACCCGTGTGC-GC TATCTACTCCACATT Paes_1687 1841291 - 1840788 - | phosphatidylglycerophosphatase A Paes_1686 1838878 - 1840857 + | deoxyxylulose-5-phosphate synthase TERM 2181 1841019 - 1841008 - GT 74 -2.2 -5.13722 | overlap 1841016 GGCAGGAAAAGAAAA GCAA CCCA CTGC CCTGCAACCTCATCG TERM 2182 1841270 - 1841245 - GT 74 -2.5 -5.03145 | overlap 1841246 1841247 CAACTTCCGAAAAAA CGGGCCATGAA GAGT TTCATGGCGAA TGGTGAACGCTGAGC Paes_1688 1841878 - 1841288 - | CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase Paes_1689 1844400 - 1842019 - | Smr protein/MutS2 TERM 2183 1844353 - 1844341 - G 78 -9.1 -3.90097 | opp_overlap 1844341, overlap 1844336 ATCCGACAAACACAA CTGCG AAA CGCAG TCTACTATTCTATCA Paes_1690 1844714 - 1845424 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 2184 1845501 - 1845488 - g 86 -3.8 -5.36965 | overlap 1845490 CAAGAGCAGAAAAAA CAGC CATCGT GCTG GCAACAAACAACCCG TERM 2185 1845529 - 1845513 - g 76 -7.9 -4.20367 | GCTGGCAACAAACAA CCCGGAC AAA GTGCGGG AAATAAAACCCATGC TERM 2186 1845551 - 1845538 - g 85 -6.7 -4.86731 | opp_overlap 1845538 1845536 GTGCGGGAAATAAAA CCCAT GCTC ATGGG TCTTTCGTCAAGCGT Paes_1691 1845463 - 1846128 + | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family Paes_1692 1846164 - 1847012 + | undecaprenol kinase TERM 2187 1847225 - 1847237 + F 70 -10.5 -2.56596 | opp_overlap 1847187 TCGTCACGCGTCACT GCGCC GAA GGCGC TCCCTTCATCCGCGC TERM 2188 1847609 - 1847635 + G 73 -3.9 -4.8487 | opp_overlap 1847609 1847612, overlap 1847612 AATGAGCTCAACATA CC-AGGATCATGA TAT TCAT-ATCCTTGG TTATTTTTTTGATCA TERM 2189 1847812 - 1847833 + G 70 -5.7 -4.39002 | opp_overlap 1847811 GAAGACCACATATAG CCGCAGTCC TGCA GGACGGAGG TTTTGTCAGAAGTTT Paes_1693 1847367 - 1848227 + | PHP domain protein TERM 2190 1848235 - 1848216 - f 71 -8.6 -3.42359 | gap 1, opp_overlap 1848228 ATGAAAAGCAGAATA GTCACGGTG TAG CACCG-GAC GCGGTCATTTGGCAA Paes_1694 1848340 - 1849134 + | protein of unknown function DUF140 TERM 2191 1849469 - 1849455 - g 70 -5 -4.52589 | opp_overlap 1849431, overlap 1849431 1849456 TTTCCTGAGAGAAAA CCTGAA ACT TTCAGA AAACGAAACCGAAAG Paes_1695 1849138 - 1849872 + | ABC transporter related Paes_1696 1849894 - 1850775 + | Mammalian cell entry related domain protein TERM 2192 1850853 - 1850825 - f 91 -9.6 -4.59342 | TGGAGCACAAATAAA GGGCACCACTAT AATTA ACAGCGATGCCC TAAAGAGAGAAACCT TERM 2193 1851055 - 1851032 - g 81 -10.2 -3.91897 | GCCGTCATCCACAAA GGCACGGTTG TTTA CCACCGCGCC TTCGGAAAGCAGACA TERM 2194 1851569 - 1851532 - g 70 -4.1 -4.64144 | gap 1, overlap 1851534 1851536 AACAATGCTGAAAAA CATAGCGCCCACAGAAAA AGA CTCCCGGTGGACGCT-CG ACATCCCGAGACCAC Paes_1697 1850870 - 1852015 + | beta-lactamase Paes_1698 1854285 - 1852363 - | Rieske (2Fe-2S) domain protein TERM 2195 1853825 - 1853805 - G 75 -5.4 -4.67904 | overlap 1853806 TATTAAGCGGAAAAA GCTTCGGT GTCTG ACCGAAGA CCTCCATAGGACGAT Paes_1699 1854391 - 1855347 + | domain of unknown function DUF1730 TERM 2196 1855518 - 1855497 - T 100 -11.5 -5.84381 | opp_overlap 1855497 TCACCAACAAAAAAA GCCCCCGGC ACAA ACCGGAGGC TATCATCAAAAAAAC Paes_1700 1857130 - 1855553 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Paes_1701 1857214 - 1857816 + | phosphoribosylglycinamide formyltransferase TERM 2197 1857820 - 1857793 - f 77 -7 -4.57073 | overlap 1857818 GATGCGCTTGAAAAA CTGCTCATCGGC AGCG GGCAATGAACAG AACACTTCTGATCAA Paes_1702 1857813 - 1858481 + | Radical SAM domain protein Paes_1703 1859773 - 1858778 - | glycosyl transferase family 2 Paes_1704 1859904 - 1860755 + | apurinic endonuclease Apn1 Paes_1705 1861624 - 1860752 - | protein of unknown function DUF214 TERM 2198 1861628 - 1861618 - G 100 -4 -6.02345 | TAAGCAGAAAAAAAA GATT CAT AATC GATGCATATTAATAA TERM 2199 1861807 - 1861827 + r 100 -11.2 -5.46698 | opp_overlap 1861807 GCTCCACATCAAAAA GCACAGTG AACAC CACTGTGC TTTTTTCGTTTTCAC TERM 2200 1861827 - 1861807 - R 100 -11.9 -4.8048 | opp_overlap 1861807 GCTCCACATCAAAAA GCACAGTGA ACA CCACTGTGC TTTTTTCGTTTTCAC Paes_1706 1862449 - 1861937 - | hypothetical protein TERM 2201 1862167 - 1862192 + g 75 -5.3 -4.62069 | CGCGTTTACCGGCAA GCACATCCTGC TGAC GCTGGGTCTGC TTTTTGCCCTCCGGG TERM 2202 1862747 - 1862727 - H 81 -12.5 -2.53263 | CGCAGGCGCAACCTA GGGGCGAGG TGC CCTCGCCCG CCGTGGCGACCTGAC TERM 2203 1862862 - 1862841 - H 100 -12.3 -4.2828 | CCCCACTCAGCAAAA GCGTCTCGC ATTC GCGAAACGC ACGGGTCAGCGTCAG TERM 2204 1863022 - 1863055 + H 76 -10.3 -3.30243 | gap 1 CGTTATCCGTTATCC GTTACCCGTTGGCGCC GAA GGCGC-AACGCGTCAC TTGTCACGCGTCACT TERM 2205 1863126 - 1863106 - H 81 -12.5 -2.53263 | CGCAGGCGCAACCTA GGGGCGAGG TGC CCTCGCCCG TGGCGACCTGACACC TERM 2206 1863238 - 1863217 - H 100 -12.3 -4.2828 | CCCCACTCAGCAAAA GCGTCTCGC ATTC GCGAAACGC ACGGGTCAGCGTCAG Paes_1707 1863606 - 1865102 + | amidophosphoribosyltransferase TERM 2207 1865134 - 1865103 - T 90 -12.5 -3.42124 | opp_overlap 1865111, overlap 1865111 GAAAACGACGTATAA CAAAAAAACCGCC TTCCAG GGCGGTTTTTTTA TGCAACAGATCAAAA TERM 2208 1865126 - 1865111 - T 100 -7.5 -5.88565 | opp_overlap 1865111, overlap 1865103 CGTATAACAAAAAAA CCGCC TTCCAG GGCGG TTTTTTTATGCAACA TERM 2209 1865111 - 1865126 + T 100 -8.2 -5.60993 | opp_overlap 1865103 1865111 CGTATAACAAAAAAA CCGCCT TCCA GGGCGG TTTTTTTATGCAACA Paes_1708 1865591 - 1865151 - | transcriptional regulator, TraR/DksA family TERM 2210 1865784 - 1865761 - R 71 -2.4 -5.07567 | opp_overlap 1865763, overlap 1865763 GTACACGTCAAAAAA CACGGTAATA ATAA CACTACCGTT TGGATTTTTCAAGAG Paes_1709 1869019 - 1865777 - | isoleucyl-tRNA synthetase TERM 2211 1869071 - 1869060 - R 77 -3.6 -5.24799 | TCAGAAAGACAAAAA CGGC TTAC GCCA ACAAGATTCTGAATA TERM 2212 1869203 - 1869176 - R 90 -9.2 -4.70046 | gap 1 CATAAAACGACAAAA GGCAAGCCACCTG TAA CAG-CAGCTTGCC CTGTAGTGCAATGCA Paes_1710 1869448 - 1869236 - | hypothetical protein Paes_1711 1870969 - 1869683 - | conjugation TrbI family protein TERM 2213 1870519 - 1870499 - G 81 -4.7 -5.03314 | GGCACCCTGAAAAAA CGGACTT GCTTCCA AAGCCCG GTCATACGCATCCTG Paes_1712 1871949 - 1871005 - | P-type conjugative transfer protein TrbG Paes_1713 1872654 - 1871956 - | Conjugal transfer protein Paes_1714 1873896 - 1872667 - | P-type conjugative transfer protein TrbL Paes_1715 1874091 - 1873909 - | hypothetical protein Paes_1716 1874868 - 1874104 - | Conjugal transfer/entry exclusion protein-like protein Paes_1717 1877340 - 1874881 - | CagE TrbE VirB component of type IV transporter system TERM 2214 1875489 - 1875471 - G 79 -10.2 -3.84278 | overlap 1875460 AAAGCGAAGGAACAA GCGCTTCC TGC GGCAGCGC CATCAAAGAATTCAT TERM 2215 1877168 - 1877119 - G 87 -5 -5.24129 | opp_overlap 1877138, overlap 1877138 CGCTTCGATAAAAAA CGACCACCCG-CTGCCCAAACGCT TCAA AGCGTT-GTTCAAACGGGCGACCG AAGAAGCAAGCTCCG Paes_1718 1877612 - 1877361 - | type IV secretory pathway VirB3 family protein Paes_1719 1877905 - 1877609 - | Conjugal transfer protein TrbC Paes_1720 1878974 - 1877985 - | P-type conjugative transfer ATPase TrbB TERM 2216 1878698 - 1878741 + g 70 -10.8 -2.73681 | gap 1 CCGAAGCCTGAAGGC GCGCTCCCCAGCCC-GGCAGC GTC GCAGCCAGGGATGGGTGACGC TCGTTAACCTCGGTA Paes_1721 1879612 - 1879106 - | putative conjugal transfer protein Paes_1722 1880237 - 1879734 - | hypothetical protein Paes_1723 1881598 - 1880573 - | dTDP-glucose 4,6-dehydratase Paes_1724 1883181 - 1882291 - | dTDP-4-dehydrorhamnose reductase Paes_1725 1884473 - 1883928 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 2217 1884449 - 1884437 - G 75 -5.5 -4.59773 | TCCGAGGCTCAAAAA CCAGA ACA TCCGG AATAGCCGTTTCAAT Paes_1726 1885852 - 1884977 - | glucose-1-phosphate thymidylyltransferase Paes_1727 1887455 - 1886034 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2218 1887302 - 1887270 - G 95 -10.6 -4.48713 | overlap 1887263 CTCAGCAACAAGAAA CCGGTGTTCCTCGT TACAC ACGCAAAACACCGG TCCAATATCTATCAT TERM 2219 1887429 - 1887415 - G 73 -11.4 -2.60219 | overlap 1887405 1887414 GACAACGGCCACAAC CGGGTC CCC GACCCG CCACTAAGAATAACA Paes_1728 1888323 - 1888805 + | hypothetical protein TERM 2220 1888833 - 1888850 + T 91 -10.5 -4.8048 | opp_overlap 1888833 ATCCATACCAAAAAA GCCCCGT CATT GCGGGGC TTTTTCGTATCAAAA TERM 2221 1888850 - 1888833 - T 100 -9.8 -5.22312 | opp_overlap 1888833 ATCCATACCAAAAAA GCCCCG TCATTG CGGGGC TTTTTCGTATCAAAA TERM 2222 1888951 - 1888979 + T 75 -9.5 -3.55444 | overlap 1888931 1888952 AAAGGGGCATCTTCC TGTAGGGGTCTGC TGC GCTGACCCGTACG TTTCGCGAATGCGAA TERM 2223 1888952 - 1888978 + T 74 -10.8 -2.73124 | overlap 1888931 1888951 AAGGGGCATCTTCCT GTAGGGGTCTGC TGC GCTGACCCGTAC GTTTCGCGAATGCGA TERM 2224 1889015 - 1888997 - T 71 -10.2 -2.79492 | opp_overlap 1888999, overlap 1888996 TCGCGAATGCGAAAC GTTGCGCC TAC GGCGCATC CATTCACCATTCACC TERM 2225 1888999 - 1889013 + T 77 -11.4 -2.53911 | opp_overlap 1888997 1888996 GCGAATGCGAAACGT TGCGCC TAC GGCGCA TCCATTCACCATTCA TERM 2226 1889220 - 1889241 + T 100 -14.5 -4.54727 | overlap 1889227 CTGGCGCTGACCCGT GCGTTTCGC GAAT GCGAAACGC TTTTGCTTTGCGAGG Paes_1729 1890054 - 1889539 - | histone acetyltransferase HPA2/related acetyltransferase Paes_1730 1890332 - 1890051 - | Protein of unknown function DUF1778 Paes_1731 1890380 - 1891033 + | hypothetical protein Paes_1732 1891758 - 1891006 - | protein of unknown function DUF218 TERM 2227 1891858 - 1891836 - R 73 -9 -3.45054 | overlap 1891840 GGTGACAAGTGACAA GTGACGCGTG ACG CACGCGGCGC AAACTGATAACGAAT TERM 2228 1891854 - 1891840 - R 77 -11.4 -2.6187 | overlap 1891836 ACAAGTGACAAGTGA CGCGTG ACG CACGCG GCGCAAACTGATAAC Paes_1733 1893682 - 1892273 - | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I TERM 2229 1894111 - 1894101 - H 71 -4 -4.83615 | opp_overlap 1894101, overlap 1894103 TACTTTGCATAAAAA CATT GCA AATG TTACTTTGCAAAAAG Paes_1734 1894141 - 1895124 + | hypothetical protein TERM 2230 1895256 - 1895282 + G 86 -12.4 -3.54741 | overlap 1895257 GATTTAGACATCGTC TTGTGCATTGAG GTT CTCGATGCACAG TTTGGAAAAGTACTG TERM 2231 1895257 - 1895281 + G 85 -13.7 -2.7263 | overlap 1895256 ATTTAGACATCGTCT TGTGCATTGAG GTT CTCGATGCACA GTTTGGAAAAGTACT TERM 2232 1895387 - 1895355 - g 72 -4.3 -4.62872 | overlap 1895357 AGCAACGGGGAAAAA TCTTTCTATCGGTTT AGC AAACCAACACAAAAA GACTACCCTGTTATG Paes_1735 1895118 - 1895882 + | hypothetical protein Paes_1736 1896593 - 1898101 + | filamentation induced by cAMP protein Fic Paes_1737 1899038 - 1898805 - | prevent-host-death family protein Paes_1738 1899427 - 1899035 - | PilT protein domain protein TERM 2233 1900250 - 1900265 + r 71 -10.4 -2.78816 | opp_overlap 1900260 GGTCTCCAGCCTCCC GCACGC GAAA GCGTGC TCTCGTCACGCGTCA TERM 2234 1900297 - 1900313 + r 89 -15.1 -3.04322 | TTGTCACTCGTCACC GCGCGCC AGC GGCGCGC TATTCAACCGTTACC Paes_1739 1902199 - 1900313 - | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 2235 1902176 - 1902156 - G 78 -8.2 -4.19735 | opp_overlap 1902136 1902155, overlap 1902157 CCCTTTAAAAGCAAA GGGGCAGC TTCCT GCTGCCCG ATATATCCTACTATT TERM 2236 1902175 - 1902157 - G 75 -11.7 -3.11359 | opp_overlap 1902136 1902155, overlap 1902156 CCTTTAAAAGCAAAG GGGCAGC TTCCT GCTGCCC GATATATCCTACTAT Paes_1740 1902641 - 1902207 - | UspA domain protein Paes_1741 1903032 - 1902808 - | hypothetical protein Paes_1742 1904176 - 1903145 - | GHMP kinase TERM 2237 1903648 - 1903636 - G 72 -6.9 -4.28548 | ATGGATTTACTAAAA CCCGA TTA CCGGG ACCGAATTCAATAAA Paes_1743 1904766 - 1904203 - | D,D-heptose 1,7-bisphosphate phosphatase Paes_1744 1905463 - 1904750 - | Nucleotidyl transferase Paes_1745 1906059 - 1905460 - | phosphoheptose isomerase Paes_1747 1906982 - 1906392 - | Adenylyl-sulfate kinase Paes_1748 1908012 - 1907026 - | NAD-dependent epimerase/dehydratase Paes_1749 1909853 - 1908072 - | TrkA-C domain protein TERM 2238 1908233 - 1908217 - G 75 -5.1 -4.61199 | ACTGGAGATAGAAAA TTTGCAG CAG CAGCAAA CGTCATGCAGAGAAT Paes_1750 1910710 - 1909919 - | 3'(2'),5'-bisphosphate nucleotidase Paes_1751 1912626 - 1910707 - | sulfate adenylyltransferase, large subunit TERM 2239 1911163 - 1911150 - G 73 -3.8 -4.77036 | opp_overlap 1911150 1911159 CGCCACGATCAAAAA GCTC TCGCTC GAGC TTGTAAGCCAACTCG Paes_1752 1913534 - 1912626 - | sulfate adenylyltransferase, small subunit Paes_1753 1914776 - 1913697 - | glycosyl transferase group 1 TERM 2240 1914038 - 1914054 + g 81 -6.7 -4.64334 | CATCAGAAAGCCTTT TATTCTT AAT AAGAATA TTTTGTTGGGGGATT TERM 2241 1915347 - 1915337 - R 80 -6.8 -4.77036 | TTCCAGTATCAAAAA TGCC CAA GGCA AGGCCGCTGTAATTC Paes_1756 1918388 - 1916469 - | sulfate adenylyltransferase, large subunit Paes_1757 1919296 - 1918388 - | sulfate adenylyltransferase, small subunit TERM 2242 1919139 - 1919119 - G 70 -5.3 -4.29928 | overlap 1919120 AATCAATATGCAAAA GGGGGAATG GAA CCTTCCCCG GATAAAAAGCCTTTT TERM 2243 1919163 - 1919148 - G 75 -4.7 -4.82901 | TTCCCCGGATAAAAA GCCTT TTCTGC AAGGC GTACCATGACTGAAG Paes_1758 1920396 - 1919329 - | dTDP-glucose 4,6-dehydratase Paes_1759 1920983 - 1920396 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 2244 1920656 - 1920640 - G 77 -8.7 -4.1196 | opp_overlap 1920639 AACCCATGCGCAAAA CCTTGGG GCA CCCAAAG CATATTGTTTTTCAC Paes_1760 1921937 - 1921041 - | glucose-1-phosphate thymidylyltransferase TERM 2245 1921698 - 1921672 - G 77 -7.1 -4.46212 | TCGCCCAGCAGAAAA GCCTGCGCCAG CCCAT CCGGCGACGGC TGCTCCATATACGAC Paes_1763 1923439 - 1922606 - | glycosyl transferase family 2 TERM 2246 1922883 - 1922867 - G 79 -2.3 -5.28983 | overlap 1922861 CTCAAAATATAAAAA TGTTTTA TCA TCAAACA TTCCAATATCAACAA Paes_1764 1924688 - 1923429 - | hypothetical protein TERM 2247 1923931 - 1923921 - G 74 -3.2 -4.95843 | ATACAAAACAGAAAA CACT AAC AGCG TCCACAATAACACAT TERM 2248 1924077 - 1924089 + g 87 -4.9 -5.21709 | opp_overlap 1924077, overlap 1924070 AACAGTGGCGAGAAA TAATC TTG GATTA TTTTTTACTATAAAA Paes_1765 1925836 - 1924898 - | sulfotransferase Paes_1766 1926728 - 1925826 - | sulfotransferase Paes_1767 1928095 - 1926752 - | polysaccharide biosynthesis protein TERM 2249 1927591 - 1927577 - G 81 -6.4 -4.78157 | opp_overlap 1927577 ACCAAAAACAATAAA CGAATC CCT GATCCG CTTTAGCCCTTTAAG Paes_1768 1928731 - 1928348 - | S23 ribosomal protein Paes_1769 1930114 - 1928930 - | glycosyl transferase family 4 TERM 2250 1929854 - 1929824 - G 74 -8.2 -3.9407 | overlap 1929827 CGGAACAAAAACGAA CATCGAGATCACCA CGG CGGTGATCACGCCG ATACCGCCAACAAGC TERM 2251 1929851 - 1929827 - G 70 -10.7 -2.7089 | overlap 1929824 AACAAAAACGAACAT CGAGATCACCA CGG CGGTGATCACG CCGATACCGCCAACA Paes_1770 1930773 - 1930414 - | S23 ribosomal protein TERM 2252 1931307 - 1931317 + G 70 -4.6 -4.56597 | overlap 1931303 1931302 GTGTGACGAGGGCGC CTGC GGC GCGG TTTTTGGACCACAGA Paes_1771 1931086 - 1931553 + | hypothetical protein TERM 2253 1931597 - 1931609 + T 70 -10.5 -2.60032 | overlap 1931596 1931601 TGACGTGTGACGAGG GCGCC TGC GGCGC GGTTTTTGGCCCACA Paes_1772 1931987 - 1931718 - | conserved hypothetical LOC575554 Paes_1773 1932780 - 1932007 - | hypothetical protein Paes_1774 1933222 - 1932866 - | S23 ribosomal protein Paes_1775 1936156 - 1933745 - | capsular exopolysaccharide family TERM 2254 1933812 - 1933829 + g 70 -10.5 -2.81547 | overlap 1933809 CCTTTGTAGCCGTAG CGGCCGT AGTA GCGGCCG TAGTTGCTGTAGCCG TERM 2255 1933912 - 1933925 + g 81 -4.5 -5.16841 | overlap 1933901 1933911 AGTCGAGTTTCTGAA CCTCT TTGA GGAGG TTTTTGTTGGTGTAG TERM 2256 1935137 - 1935164 + g 79 -4.1 -5.07567 | gap 1, overlap 1935127 1935139 GGTGAGCTCCTGCAG GC-GCTGCTTGA GCACG TCGAGCTGCTGC TTTTTTGCAATGTAG Paes_1776 1936763 - 1936407 - | S23 ribosomal protein Paes_1777 1937495 - 1936923 - | hypothetical protein TERM 2257 1937127 - 1937141 + g 77 -2.8 -5.09426 | TTCGTCGGGTTTATA GCGAAG CAC TTTTGC TTTTTTCAGATTGGC TERM 2258 1937943 - 1937967 + H 71 -8.5 -3.53012 | opp_overlap 1937953 1937957, overlap 1937953 1937958 CCTTCGGCGCGGTGA CGCGTGACAAG TGA CGTGTGACGCG TTTGCGCCGCAGGCG TERM 2259 1941341 - 1941331 - g 88 -5.4 -5.24129 | overlap 1941334 GGTGTTTACAAAAAA CAAG CGC CTTG CCAGCGCCCCGGTCG TERM 2260 1941348 - 1941334 - g 72 -4.9 -4.72201 | overlap 1941331 GTTTACAAAAAACAA GCGCC TTGCC AGCGC CCCGGTCGAAGAACT Paes_1778 1938218 - 1941712 + | alpha amylase catalytic region TERM 2261 1941825 - 1941812 - T 75 -9.5 -3.54543 | AGCGATGGGGCGAAA GCGCC TGTC GGCGC CAACTGGTAACGAAT TERM 2262 1941890 - 1941871 - T 100 -11.4 -5.99154 | opp_overlap 1941866 1941871 CACCAAATAAAAAAA GCCCGGCT TTGT AACCGGGC TTTTGTAGTGTGCGA TERM 2263 1941871 - 1941890 + T 88 -9.2 -4.50976 | opp_overlap 1941871, overlap 1941866 CACCAAATAAAAAAA GCCCGGCT TTGT AACCGGGC TTTTGTAGTGTGCGA Paes_1779 1943191 - 1941923 - | Cytochrome b/b6 domain TERM 2264 1942871 - 1942858 - G 71 -2.3 -4.92757 | overlap 1942859 TGATGAAGAAGAAAA GGGTG AGGC CACCA AAATAGTACCAGAAC TERM 2265 1943055 - 1943074 + g 77 -7 -4.54727 | CCGGATTTTGAACCG CCGGCGAC AGAT GCTGCCGG TTTTGGTTTGGCAGA Paes_1780 1943776 - 1943231 - | Plastoquinol--plastocyanin reductase TERM 2266 1943877 - 1943899 + r 76 -6.2 -4.55128 | opp_overlap 1943874 1943871, overlap 1943890 1943891 TCAGCGAAACCACCC CGTTCCGGAG AGA TTGCGGAGCG TTTTGCTTTGCAGGT Paes_1781 1945080 - 1943950 - | hydroxyneurosporene synthase TERM 2267 1944061 - 1944049 - G 80 -5.5 -5.00884 | overlap 1944058 ACTGCGGGTAAAAAA GCGAA GAA TCCGC GATTGCAGGCGTCCC TERM 2268 1945496 - 1945510 + H 79 -2.8 -5.38497 | overlap 1945499 TTGCGTATAAATCAT CAGG AATAAAC CCTG TTTTTTCATTTGGAT TERM 2269 1946383 - 1946372 - g 70 -4.4 -4.48987 | CCCGCATAATGAAAA GCTT GAGG AAGC GCTGAAGACAATTGA Paes_1782 1945623 - 1946600 + | protein of unknown function DUF1568 TERM 2270 1946717 - 1946671 - T 87 -13.7 -3.09516 | gap 1, opp_overlap 1946680, overlap 1946637 GCGCGGAGGAGTGAA GGGCGACGGGGCGATTGGCGCC TGTC GGC-CCAATCACCTCTTCCCCC CCTCCGACACTCTTT TERM 2271 1946680 - 1946708 + T 71 -9.6 -3.02511 | gap 1, opp_overlap 1946671 AGTGAAGGGCGACGG GGCGATTGGCGCC TGTC GGC-CCAATCACC TCTTCCCCCCCTCCG Paes_1783 1948243 - 1946732 - | glutamyl-tRNA synthetase TERM 2272 1948489 - 1948510 + H 100 -14.5 -4.34402 | CTGGCGCTGACCCGT GCGTTTCGC GGAT GCGAAACGC TTTTGCTGTGCGAGG TERM 2273 1950458 - 1950445 - g 72 -4.5 -4.72333 | AACGATATCGAAAAA GCGAC CGAT ATCGC ACGCAAAATGGTACG Paes_1784 1948789 - 1950771 + | ATP-dependent metalloprotease FtsH Paes_1785 1950783 - 1951148 + | hypothetical protein Paes_1786 1951187 - 1951498 + | histone family protein DNA-binding protein TERM 2274 1951537 - 1951509 - T 100 -14.7 -4.71061 | opp_overlap 1951515, overlap 1951515 AGTGAGACGGAAAAA CAAAAACCCGGTC TTC AACCGGGTTTCTG AACAGTGACTGATTC TERM 2275 1951531 - 1951515 - T 100 -10.1 -5.63236 | opp_overlap 1951515, overlap 1951509 ACGGAAAAACAAAAA CCCGGTC TTC AACCGGG TTTCTGAACAGTGAC TERM 2276 1951515 - 1951531 + T 81 -9.4 -3.86897 | opp_overlap 1951515 1951509 ACGGAAAAACAAAAA CCCGGT CTTCA ACCGGG TTTCTGAACAGTGAC Paes_1787 1951953 - 1951567 - | hypothetical protein Paes_1788 1953459 - 1951966 - | Citrate transporter TERM 2277 1952571 - 1952551 - G 70 -9.7 -3.20348 | overlap 1952566 TTCACGAATACCGAA CGGGACATG AAA CATGTCCTG AAGGCTCGGGAAGCC TERM 2278 1953509 - 1953536 + r 100 -14.8 -3.53012 | ACGGAACTACTTGTC GGGGCCGTCAGG ATCC CCTGCCGGCTCC TTTGAAACGAAGCGC Paes_1789 1954164 - 1953631 - | adenine phosphoribosyltransferase TERM 2279 1953905 - 1953921 + g 82 -7.9 -4.46212 | TGATTGACCGTTTCG CCGGGCA GCT TGCCGGG TTTTCTGATCGGGAC Paes_1790 1955622 - 1954264 - | RNA modification enzyme, MiaB family TERM 2280 1955952 - 1955921 - g 93 -6 -5.2422 | gap 1 AATTACAGGAAAAAA TCGCTGC-GATAC AAAACGA ATATCAGCAGCGA ATTCAGCCACTTGAA Paes_1791 1955809 - 1956279 + | hypothetical protein TERM 2281 1956388 - 1956348 - T 100 -18 -2.80816 | gap 1, opp_overlap 1956360, overlap 1956360 TTGTGATGCATCATA CGACAAAAAAAAGCGGCTT TTTC AAGCCGCTTTTTTTTGT-G TTCGACGGGAGGGAG TERM 2282 1956377 - 1956360 - T 100 -11.3 -6.00086 | opp_overlap 1956360, overlap 1956348 ATACGACAAAAAAAA GCGGCTT TTTC AAGCCGC TTTTTTTTGTGTTCG TERM 2283 1956360 - 1956377 + T 100 -11.3 -6.10295 | opp_overlap 1956348 1956360 ATACGACAAAAAAAA GCGGCTT TTTC AAGCCGC TTTTTTTTGTGTTCG Paes_1792 1957760 - 1956537 - | rod shape-determining protein RodA TERM 2284 1956672 - 1956662 - G 81 -6.8 -4.63527 | CGATGACGGGAAAAA GACC GAT GGTC ATGCCGATGTTGATC TERM 2285 1957660 - 1957649 - G 87 -4.4 -5.24129 | GCTGCTTATAAAAAA GATC GACA GATC CTACACCGTTACTTG Paes_1793 1957898 - 1958821 + | GTP-binding protein Era TERM 2286 1958962 - 1958984 + T 100 -18.4 -3.28712 | opp_overlap 1958962 CACCATATAAAAAAA GCCGCCCGGG GGT TCCGGGCGGC TTGTAAGAGAAAGGC TERM 2287 1958984 - 1958962 - T 100 -17.7 -5.74122 | opp_overlap 1958962 CACCATATAAAAAAA GCCGCCCGG GGGTT CCGGGCGGC TTGTAAGAGAAAGGC TERM 2288 1959010 - 1959020 + T 71 -4.6 -4.61527 | overlap 1959001 1959019 AAGGCTGCTGGTCTC GGCT TTA GGCC TTTTTCGAGGATTTT Paes_1794 1960780 - 1959014 - | RNA binding S1 domain protein TERM 2289 1959040 - 1959073 + g 72 -6.2 -4.3953 | gap 2, overlap 1959051 TCGAGGATTTTGGCT GAGATTCGAGTGATGC GCTG GCATC-TTCGA-TCTC TTTCTTCTCGTTCGG TERM 2290 1959338 - 1959361 + g 72 -7.4 -3.97834 | overlap 1959340 CTGGGAGATCTCGCC TGCGCATTCG GCGC CGACTGCGTA TTTCTGCTCGAATTC TERM 2291 1959998 - 1959973 - G 70 -6.9 -4.01101 | overlap 1959976 1959977 CAAAGCCAACAACAA CAACCTTGATC GGCT GATCAAGTTCG ACAACTTCTGAAGGA TERM 2292 1960921 - 1960880 - H 86 -2.4 -5.61596 | gap 2 ACCTGTACAAAAAAA CGCTAT-G-GCGAATTTCAT CAGG ATGACATCCGCTCCATCGCG AGGTTGTAGACAAGC TERM 2293 1961555 - 1961570 + H 79 -2.6 -5.37345 | gap 1, overlap 1961553 GATGCCGCAGGACCG TCGATCG CTA CGAT-GA TTTTTTCTGCTTGAC TERM 2294 1961715 - 1961691 - H 88 -10.8 -4.18762 | gap 1 AACCTTGAGCGAAAA GGACATGCGGC GCTC GCCG-ATGTCC GGATTATCATGTATT TERM 2295 1962696 - 1962668 - g 73 -9.5 -3.58343 | overlap 1962669 TGGACCATTCGCAAA GGCGCCGCAGC GCCGGAA GCTGCAGCGGC GATCCATACCGATTT Paes_1796 1961777 - 1962868 + | GTP-binding protein YchF TERM 2296 1962885 - 1962872 - f 74 -9.5 -3.38314 | overlap 1962870 TTTAATGTGTAAAGA GCGCC TGTC GGCGC CAACGGGTAACGGAT TERM 2297 1963756 - 1963736 - g 77 -8.3 -4.11394 | ACCCTATTCTTAAAA CCATGATCC AGG AGATCACGG GACCCGACATCAGGA Paes_1797 1963153 - 1963962 + | glutamate racemase TERM 2298 1964007 - 1964031 + T 100 -15.7 -3.57144 | CCCTTCGGGCAGTGA CGCGTGACGCG TGA CGCGTGACGCG TTTGCGCCTGCGGCG Paes_1798 1964969 - 1964160 - | short-chain dehydrogenase/reductase SDR TERM 2299 1964332 - 1964312 - G 79 -12.5 -3.00766 | overlap 1964301 AACAGGCGAGATAGA GCAGCGGAG GGG CTCCGCAGC TAACATCGTCTCCCT Paes_1799 1965477 - 1964971 - | hypothetical protein Paes_1800 1966317 - 1965490 - | short-chain dehydrogenase/reductase SDR Paes_1801 1967888 - 1966602 - | Ribulose-bisphosphate carboxylase Paes_1802 1968903 - 1968022 - | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2300 1968853 - 1968836 - G 100 -4.1 -5.7946 | opp_overlap 1968845 CCTTTAAGAAAAAAA CCCTG GTTGTCGA CAGGG ACGTCGGTGTGATAA Paes_1803 1971068 - 1968951 - | short-chain dehydrogenase/reductase SDR TERM 2301 1971128 - 1971118 - R 79 -6.8 -4.63479 | GATTATAAAGTAAAA GCTC TAT GAGC TCCTCAGCCTTTTCA Paes_1804 1971411 - 1971190 - | hypothetical protein TERM 2302 1971268 - 1971252 - G 75 -4.3 -4.86385 | ATCCGGAAAAATAAA TCGCGAC AAA GCCGGGA ATAACGATGCTGAGG Paes_1805 1971924 - 1971451 - | 2-vinyl bacteriochlorophyllide hydratase Paes_1806 1972299 - 1973705 + | Radical SAM domain protein TERM 2303 1973786 - 1973799 + F 71 -9.5 -2.98942 | opp_overlap 1973785 1973784, overlap 1973789 1973796 CCCGCTGTCAGAAGT GCCCG GCCC CGGGC TGTCTGTCAGCCACT TERM 2304 1974159 - 1974133 - g 73 -11.5 -2.83164 | TGAGGGAGTATGATA GCGCGGCACAG TGCCT CAATGCCGCGC TGAAAAAAATGCCAT Paes_1807 1973832 - 1974287 + | regulatory protein RecX Paes_1808 1975021 - 1974296 - | uridylate kinase TERM 2305 1974490 - 1974503 + g 75 -4.5 -4.84359 | AAATATTGCTGTACA TCTCG GCAG CGGGA TTTTTCTCAGGATCC TERM 2306 1975162 - 1975190 + r 70 -10.4 -2.63089 | opp_overlap 1975168, overlap 1975168 AAGAATCGTGCTAAA AAAAAAGCCTCG AAAAA CGAGGCTTTTTC ATATTTACGCTCCTA TERM 2307 1975168 - 1975184 + r 93 -9.4 -4.93696 | opp_overlap 1975168, overlap 1975162 CGTGCTAAAAAAAAA GCCTCG AAAAA CGAGGC TTTTTCATATTTACG TERM 2308 1975184 - 1975168 - R 100 -9.4 -6.06723 | opp_overlap 1975168 1975162 CGTGCTAAAAAAAAA GCCTCG AAAAA CGAGGC TTTTTCATATTTACG Paes_1809 1976061 - 1975195 - | translation elongation factor Ts Paes_1810 1976855 - 1976094 - | ribosomal protein S2 TERM 2309 1976920 - 1976901 - R 76 -10 -3.28712 | CCCGGTCGCGCAGAA TCCGGTGC ACAA ACACCGGA CACTACCACGCAACA Paes_1811 1977390 - 1976995 - | ribosomal protein S9 TERM 2310 1977021 - 1977042 + g 86 -3.7 -5.37593 | AGAACTGGAATCTCT TACGGGC TTTCTTCT GTCCGTA TTTTTTCCTTTCAAC TERM 2311 1977346 - 1977333 - G 77 -3.1 -5.1356 | gap 1, overlap 1977327 CCGGAGCAAGAAAAA CTCTGG CAA CC-GAG GTCTTCCTACGGCCG Paes_1812 1977851 - 1977402 - | ribosomal protein L13 TERM 2312 1978414 - 1978436 + G 74 -8.4 -3.91882 | overlap 1978417 CGAACAGACACTGAC TGCCATCGGT GAA GCCGATGTCA TTATCTTTCTGGTCG Paes_1813 1978184 - 1979494 + | small GTP-binding protein Paes_1814 1979560 - 1980651 + | protein of unknown function DUF59 TERM 2313 1980688 - 1980676 - f 71 -10.5 -2.77519 | overlap 1980672 AAGAGGGAAAAGGGA GCGCC TTC GGCGC CAGGCCTCCCCGTCG Paes_1815 1980807 - 1981067 + | nitrogen-fixing NifU domain protein TERM 2314 1981083 - 1981115 + T 100 -13.5 -3.53444 | opp_overlap 1981083 1981085 1981090, overlap 1981091 GAAAGAGCACAAGAA TACAAAAGCCCCGGT CAT GCCGGGGTTTTTGCA TTTAAAAGCGCCTGG TERM 2315 1981115 - 1981083 - T 100 -12.8 -3.90897 | opp_overlap 1981083 1981091, overlap 1981085 1981090 GAAAGAGCACAAGAA TACAAAAGCCCCGG TCATG CCGGGGTTTTTGCA TTTAAAAGCGCCTGG TERM 2316 1981113 - 1981085 - T 100 -13.2 -3.52482 | opp_overlap 1981083 1981091, overlap 1981083 1981090 AAGAGCACAAGAATA CAAAAGCCCCGG TCATG CCGGGGTTTTTG CATTTAAAAGCGCCT TERM 2317 1981108 - 1981090 - T 83 -7.3 -4.82162 | opp_overlap 1981083 1981091, overlap 1981085 1981083 CACAAGAATACAAAA GCCCCGG TCATG CCGGGGT TTTTGCATTTAAAAG TERM 2318 1981091 - 1981107 + T 100 -11.5 -4.81249 | opp_overlap 1981090 1981085 1981083, overlap 1981083 ACAAGAATACAAAAG CCCCGGT CAT GCCGGGG TTTTTGCATTTAAAA TERM 2319 1981133 - 1981123 - T 76 -8.2 -4.18018 | overlap 1981124 TTTTTGCATTTAAAA GCGC CTG GCGC CTGTCGGCGCGGTGA Paes_1816 1983685 - 1981316 - | cell divisionFtsK/SpoIIIE TERM 2320 1982710 - 1982732 + g 77 -12 -3.18023 | overlap 1982708 GTTTGTTTTTACTTT CGTCGAGCAG GCT CTGATCGACG TATTCATCCTCATCG TERM 2321 1983025 - 1983038 + g 79 -3.8 -5.03145 | CAGACGCTCTGCTCT GCGA GGCACG TCGC TTTTTTCGCGGGTTC TERM 2322 1983278 - 1983257 - G 70 -4.4 -4.4572 | gap 1, overlap 1983253 1983259 AACAGTTGAAAGAAA CG-CGGCAA GCATT CTGCCGACG GTTCCAGCCATAAGA Paes_1817 1984844 - 1983753 - | glycine cleavage system T protein TERM 2323 1983822 - 1983837 + g 70 -10.4 -3.25823 | opp_overlap 1983822 1983824 CCTGACTTCCAGATA GAGCGG TGTT CCGCTC TTCATATAGCCGCGC TERM 2324 1984466 - 1984490 + g 75 -4.4 -4.75308 | gap 1, opp_overlap 1984466 1984468, overlap 1984470 CTTCAAACGATCCAA GA-TGTTCCTG CAGC CAGGAATAATC TTTTTCCATGTTGCT TERM 2325 1985317 - 1985302 - g 72 -6 -4.3739 | overlap 1985304 GAGCTTGTGATAAAA GGCCGG CGGA CCGGAC GTATGGCTGCGGCTA Paes_1818 1985215 - 1985460 + | hypothetical protein Paes_1819 1985955 - 1985434 - | hypothetical protein Paes_1820 1986523 - 1985999 - | Tetratricopeptide TPR_2 repeat protein Paes_1821 1986776 - 1986606 - | hypothetical protein TERM 2326 1986740 - 1986726 - G 81 -7.1 -4.59489 | opp_overlap 1986725 1986714 1986710 AACGGAAAGAACAAA CGGCA TTGAC TGCCG GATCTCTTTCCTGTT Paes_1822 1987440 - 1986802 - | protein of unknown function DUF477 Paes_1823 1988245 - 1987493 - | protein of unknown function DUF477 Paes_1824 1988871 - 1988275 - | LemA family protein TERM 2327 1989022 - 1989009 - H 100 -3.8 -5.73339 | opp_overlap 1989014 AGAAGCAGAAAAAAA CAGG CTCCCC CCTG TTGGGATTTTTTATT TERM 2328 1989014 - 1989028 + H 83 -2.8 -5.55769 | opp_overlap 1989009 CAGAAAAAAACAGGC TCCC CCCTGTT GGGA TTTTTTATTGTCCCG TERM 2329 1989128 - 1989147 + G 70 -3.5 -4.59853 | overlap 1989130 TCTCTTCATCTGCTC GATCCTG TGCAGC CAGGAGC TTTTTGCAAGCTTCG TERM 2330 1989565 - 1989577 + G 70 -4.7 -4.45399 | overlap 1989566 GAATTGCGGTTTCTG CCGGC AAG GCCGC TTTTGATCTTGCTGT Paes_1825 1989096 - 1989920 + | hypothetical protein Paes_1826 1992408 - 1990210 - | (p)ppGpp synthetase I, SpoT/RelA TERM 2331 1991721 - 1991735 + g 81 -8.6 -4.38712 | TCTGGAGATCATCCT TGATCG GTA CGATCA TTTTATCGAGATAGG TERM 2332 1992264 - 1992251 - G 82 -2.3 -5.39721 | opp_overlap 1992255, overlap 1992253 GGATGATAGAAAAAA GGCTC GCCC GAGGC ACGTTTTTCACCTTC TERM 2333 1992362 - 1992333 - G 70 -10.9 -2.80354 | opp_overlap 1992322, overlap 1992332 GAGATTCATCGAAAT TTTTAAGGTTTGC TCGA GCAAGCCTTAAAA CCTCGTGAAGTTTTT Paes_1827 1994499 - 1992448 - | excinuclease ABC, B subunit TERM 2334 1992504 - 1992516 + g 71 -3.3 -4.77438 | TGGAAATCTCGTCAC GCAAC CAC GCTGC TTTTTCATACTCCAT TERM 2335 1992618 - 1992631 + g 91 -8.1 -5.0916 | TATCGATAACGCCCT CGAGC AGAC GCTCG TTTTTCTGTTGAAGG Paes_1828 1994743 - 1994543 - | hypothetical protein TERM 2336 1995566 - 1995551 - g 71 -2.6 -4.95155 | gap 1 GCGACAGCAGAAAAA TAT-GGG AAG CCCTATA CTCCGGCCTGTTTAC Paes_1829 1994842 - 1997796 + | peptidase M16 domain protein TERM 2337 1997856 - 1997830 - f 72 -7.3 -4.13767 | gap 1, overlap 1997838 TCGGTGACCGGAAAA GCCGAAAAGCTG TATG CAGCTAT-CGGC GCAAACCATTAACGG Paes_1830 1997921 - 1998832 + | band 7 protein TERM 2338 1999784 - 1999764 - g 74 -7.6 -4.04859 | CGAAGAAAAGAAAGA TGCAGGCT TTTCC AACCTGCA GACGGCCATCATCGA Paes_1831 1998898 - 2000061 + | permease YjgP/YjgQ family protein Paes_1832 2000067 - 2000900 + | protein of unknown function DUF62 TERM 2339 2000888 - 2000876 - T 72 -10.5 -2.87344 | opp_overlap 2000872 2000876 CAGCCTTGTGAGAGA CCGGG ATC CCCGG TCGATTGACTGAGCA TERM 2340 2000876 - 2000888 + T 70 -10.5 -2.54896 | opp_overlap 2000876, overlap 2000872 CAGCCTTGTGAGAGA CCGGG ATC CCCGG TCGATTGACTGAGCA Paes_1833 2001594 - 2000860 - | TrkA-N domain protein Paes_1834 2003525 - 2001624 - | H(+)-transporting two-sector ATPase TERM 2341 2001738 - 2001726 - G 72 -7.7 -3.86015 | GATCCTTCCGATAAA CATCG AAA CGATG ATGACGCATTTTCCG TERM 2342 2002591 - 2002581 - G 77 -3.2 -5.10077 | overlap 2002585 2002588 AAAGATCGCAAAAAA CAGA CGA TCCG GAGCGGATGCGAACG TERM 2343 2002814 - 2002785 - G 84 -7.8 -4.65838 | CATATAGGCGAAAAA GGTGGTCATGGT CATAAT ACCAAGTCCACC GAGCTGCATAAGAAT TERM 2344 2002839 - 2002862 + g 76 -7.4 -4.16943 | opp_overlap 2002839 AAGAATCATGATAAC GGTCTGGCCG AACA TGGTCAGATC TTTTGCGGTATCGAC TERM 2345 2003021 - 2003008 - G 78 -5.3 -4.80656 | ATGAATAACAGAAAA CTCAT AATG ATGAG CGCAGCAGGCTGGAC Paes_1835 2004440 - 2003541 - | RNA polymerase, sigma 32 subunit, RpoH TERM 2346 2003588 - 2003603 + g 74 -3.2 -4.91873 | TATAGGCTGACTGGC GCAATC TTCT GATGGC TTTTTCCTTGATCTG Paes_1836 2007282 - 2004574 - | valyl-tRNA synthetase TERM 2347 2004607 - 2004636 + g 80 -5.7 -4.93968 | gap 1, opp_overlap 2004611 CATGTTTGCCTTTAA CTTACTGAGGCTCG CAG CG-GCTTCGGCAAG TTTTTCCTTCTCGCT Paes_1837 2008201 - 2007521 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 2348 2008434 - 2008447 + H 70 -9.5 -2.84414 | opp_overlap 2008432 2008434, overlap 2008433 2008446 GCGCGGGAGAAGAGA GCGCC TGTC GGCGC ATTTGAGTATGCTTT TERM 2349 2008447 - 2008434 - H 72 -9.5 -3.17146 | opp_overlap 2008434 2008433 2008446, overlap 2008432 GCGCGGGAGAAGAGA GCGCC TGTC GGCGC ATTTGAGTATGCTTT TERM 2350 2009249 - 2009239 - g 70 -6.8 -4.07746 | GGTCGAAAAATATAA CGAG GCT CTCG ACAAGGGCATCGCGA Paes_1838 2008814 - 2009479 + | thymidylate synthase, flavin-dependent Paes_1839 2010303 - 2009464 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 2351 2009841 - 2009860 + g 78 -10.8 -3.53012 | opp_overlap 2009839 ATATGATCAGAAGCG GAGCATTG TGCT CAATGCTC TTTGAGACGGCACGG TERM 2352 2009978 - 2009990 + g 71 -3.3 -4.77925 | overlap 2009970 CTTCCGATGGCGTTT CGGCA TGC TTCCG TTTTTCCCGTTTTTT TERM 2353 2010167 - 2010192 + g 79 -2.6 -5.24531 | gap 1, opp_overlap 2010167 2010180 TAGCCGCACTCACAA CAGG-TGTAGA AATGG TCTTCAACCTG TTTTTTATGCAGCAT TERM 2354 2011082 - 2011068 - g 73 -11.4 -2.71364 | opp_overlap 2011066 2011068 CGATGCGGGCAAGCA GCACCG TCC CGGTGC TCTTTCAACCGGTTG TERM 2355 2011068 - 2011082 + G 80 -11.4 -3.35522 | opp_overlap 2011068, overlap 2011066 CGATGCGGGCAAGCA GCACCG TCC CGGTGC TCTTTCAACCGGTTG TERM 2356 2011156 - 2011115 - g 72 -8.7 -3.80893 | gap 1, overlap 2011116 ATGGGAGAATGGAAA CTCGCCGACGG-AGGGCTGG TGG CCAACCTTGCCGTTGACGAA CTTGAACGGGCCGGC TERM 2357 2011999 - 2011985 - g 79 -10 -3.74224 | overlap 2011993 2011994 TCCAAAGTACTCAAA CTCGAC AAC GTCGAG CGCTCGATCGACAAT TERM 2358 2012532 - 2012515 - g 76 -7.7 -4.28548 | overlap 2012516 ATTCACCGACGAAAA CCAGGGT CTCT ACCCTGA AGACAATAACGATAT TERM 2359 2013022 - 2013033 + G 70 -7.2 -4.11216 | ATGGAAAACCCCTAT CGGG CCCG CCCG TTTTACCGCTGCAAA Paes_1840 2010443 - 2013145 + | Patatin Paes_1841 2013240 - 2014013 + | stationary-phase survival protein SurE TERM 2360 2015334 - 2015321 - g 78 -5.2 -4.82901 | TGCCCTTCAGAAAAA CGCC ATAAAA GGCG GTGACAATCATGACT TERM 2361 2015567 - 2015557 - g 70 -4.6 -4.51196 | opp_overlap 2015557 GCCAAATCGATAAAA GCGC GAT GCAC CTCTTTCCCGGAGGG Paes_1842 2014017 - 2015708 + | hypothetical protein Paes_1843 2017826 - 2015685 - | thiol-disulfide interchange protein DsbD precursor-like protein TERM 2362 2017534 - 2017513 - G 70 -10.1 -3.24365 | overlap 2017511 CCATAGCCGATAAGA CCGGCCG CCTCAAAT CGGCCGG GAAGAGGAAATTCAA Paes_1844 2018682 - 2017882 - | cytochrome c assembly protein Paes_1845 2019914 - 2018679 - | hypothetical protein Paes_1846 2020262 - 2019933 - | transcriptional regulator, fis family TERM 2363 2020022 - 2020042 + g 70 -3.9 -4.63218 | opp_overlap 2020012 TCATACGGATATCGT TCTCCGAAG CGC CATCGCAGA TTTTCTTGACAGCCA Paes_1847 2021058 - 2020333 - | UBA/THIF-type NAD/FAD binding protein Paes_1848 2021161 - 2021616 + | hypothetical protein Paes_1849 2022350 - 2021613 - | hypothetical protein TERM 2364 2021976 - 2021990 + g 72 -7.8 -3.92324 | AAACGGGTTCGACTT CTGCTG GTT CGGCAG TTTGATATTAAAACC Paes_1850 2022936 - 2022355 - | glutamine amidotransferase of anthranilate synthase Paes_1851 2024220 - 2022967 - | hypothetical protein Paes_1852 2025189 - 2024284 - | diacylglycerol kinase catalytic region TERM 2365 2024706 - 2024691 - G 75 -6.8 -4.3208 | CCGTATAACCTAAAA GCTCCC TCAA GAGAGC ATAGAGATACACCAC Paes_1853 2025711 - 2025208 - | protein tyrosine phosphatase TERM 2366 2025672 - 2025648 - G 77 -2.7 -5.07567 | overlap 2025650 CGAGAGCCGAAAAAA TACCTTCCGCC ATA GGAGAACGGCA GATATTTTCATAACA TERM 2367 2025779 - 2025764 - H 74 -4 -4.99947 | GGTAAGCAAAGAAAA CAATCC GCAG GGATTA TGTCAAATGCTCTGA TERM 2368 2025850 - 2025821 - H 100 -15.9 -3.21772 | opp_overlap 2025827, overlap 2025827 AACCGGCTTACAACA GCAAAAGCAGCAC TTCT GTGCTGCTTTTAC CCGTGCAGAAATCCC TERM 2369 2025827 - 2025844 + H 91 -11.3 -4.11216 | opp_overlap 2025821 2025827 CTTACAACAGCAAAA GCAGCAC TTCT GTGCTGC TTTTACCCGTGCAGA TERM 2370 2025844 - 2025827 - H 100 -11.3 -4.46656 | opp_overlap 2025827, overlap 2025821 CTTACAACAGCAAAA GCAGCAC TTCT GTGCTGC TTTTACCCGTGCAGA TERM 2371 2026990 - 2026977 - g 93 -3.8 -5.48825 | overlap 2026979 2026989 GATGATCGAAAAAAA GCTC AACATA GAGC TGACCACAACAGATT Paes_1854 2026006 - 2027235 + | hypothetical protein TERM 2372 2028481 - 2028464 - g 88 -11.3 -3.81461 | overlap 2028455 AAAGAGGAATGGAAA GCATCCG CTAC CGGATGC ACAAAAAGATCGGAC TERM 2373 2028516 - 2028489 - g 73 -3.5 -4.87665 | gap 1, overlap 2028492 CCGGATGCACAAAAA GATCGGACTGAC CAAAC ACCAGTCC-ATC AAAAACTACCTGAAC Paes_1855 2027335 - 2028564 + | hypothetical protein TERM 2374 2029488 - 2029455 - g 74 -2.5 -5.03747 | gap 1, overlap 2029458 AAATCGCTGAAAAAA CAATTCTTCTCAATGC TCA GC-TTGAGATGAATAA AAAACTCAAAGCACT TERM 2375 2029485 - 2029458 - g 77 -6.4 -4.61482 | gap 1, overlap 2029455 TCGCTGAAAAAACAA TTCTTCTCAATGC TCA GC-TTGAGATGAA TAAAAAACTCAAAGC TERM 2376 2029895 - 2029878 - g 82 -11.3 -3.55071 | overlap 2029866 2029868 CCAGAGGCCTCGAAA GCATCCG ATAC CGGATGC ACAAGAAAATGGGAT Paes_1856 2028740 - 2029963 + | hypothetical protein TERM 2377 2030033 - 2030020 - g 82 -3.1 -5.26316 | CTATCTCACAAAAAA TGAAC CAGT GTCCA GTATCCCATCTCCCG TERM 2378 2031202 - 2031192 - g 88 -5.4 -5.24531 | AGGCTTCACAAAAAA CTGA AGC TCAG CCGACATGAATCGAT Paes_1857 2030019 - 2031257 + | hypothetical protein Paes_1858 2032672 - 2031299 - | Aldehyde Dehydrogenase TERM 2379 2032743 - 2032721 - R 71 -2.1 -5.07652 | overlap 2032731 CTGTTGAAAAGAAAA GAATAATTT ACCGA AAATTTTTC GAGAGGAACAAGGGG Paes_1859 2033735 - 2032785 - | ribosome small subunit-dependent GTPase A Paes_1860 2035898 - 2033760 - | ATP-dependent DNA helicase RecG TERM 2380 2035355 - 2035373 + g 77 -3 -5.15634 | overlap 2035357 TAATCGCACGCAGAC GCCGGG AATCCAG CCCCGC TTTTTTCATGGCATC TERM 2381 2035417 - 2035403 - G 75 -11.4 -2.89564 | opp_overlap 2035402 CCGTTACCGGATAGA GCGGGA TAA TCCCGC CTGTATGGAAAAGAT TERM 2382 2035844 - 2035867 + g 75 -11.8 -3.09987 | overlap 2035837 2035834 CTTTCTCCGGGCCAA CTCCTTTGAC AAAG GTCAGAGGAG TTGAGTCACTATTCA Paes_1861 2036061 - 2036279 + | ribosomal protein L31 TERM 2383 2036582 - 2036568 - g 70 -4.2 -4.65895 | overlap 2036570 GCCGCCACGGAAAAA GCCATC CGT GATGCC AATCTCGGCCTTAAC Paes_1862 2036325 - 2036885 + | ribosome recycling factor TERM 2384 2036947 - 2036902 - T 100 -14.1 -3.47975 | opp_overlap 2036909 2036917, overlap 2036917 TGACAGAAGAGAACA GTCATTATGTAAAAAGCCGGG ATTA CCCGGCTTTTTACATTTCGTC TCACCATTTGCCGCC TERM 2385 2036909 - 2036940 + T 100 -20.4 -3.8377 | opp_overlap 2036902 2036917, overlap 2036917 AGAGAACAGTCATTA TGTAAAAAGCCGGG ATTA CCCGGCTTTTTACA TTTCGTCTCACCATT TERM 2386 2036917 - 2036932 + T 100 -11.8 -4.82855 | opp_overlap 2036902 2036917, overlap 2036909 GTCATTATGTAAAAA GCCGGG ATTA CCCGGC TTTTTACATTTCGTC TERM 2387 2036932 - 2036917 - T 100 -11.8 -4.68593 | opp_overlap 2036917 2036909, overlap 2036902 GTCATTATGTAAAAA GCCGGG ATTA CCCGGC TTTTTACATTTCGTC Paes_1863 2038234 - 2036987 - | chlorophyllide reductase subunit Y Paes_1864 2038753 - 2038271 - | hypothetical protein Paes_1866 2040892 - 2040143 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase Paes_1865 2038966 - 2040201 + | exodeoxyribonuclease VII, large subunit Paes_1867 2041414 - 2040971 - | D-tyrosyl-tRNA(Tyr) deacylase Paes_1868 2041725 - 2041411 - | protein of unknown function DUF167 TERM 2388 2041474 - 2041452 - G 70 -4.1 -4.72986 | gap 1, overlap 2041454 GATGCTCACCAAAAA GCGTCGCAGC CTCC GCTGC-ACCC ATACCATCTATAGTC Paes_1869 2042026 - 2041739 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 2389 2041964 - 2041978 + g 78 -7.8 -4.3534 | opp_overlap 2041973, overlap 2041968 CTTCTCCTGCTCGGC CTCCGT AAA GCGGAG TTTTGCTAATTCCGC Paes_1870 2043581 - 2042235 - | citrate synthase I Paes_1871 2045286 - 2043712 - | amino acid carrier protein TERM 2390 2043812 - 2043800 - G 70 -6.3 -4.28067 | GCAAGAATATACAAA CCAAT AAT ATTGG GAAACGACATGGCAA TERM 2391 2044540 - 2044530 - G 77 -6.8 -4.56775 | opp_overlap 2044517 2044530 ACCCCTGCTCAAAAA GCAG GCT CTGC TCTCCTCCTGTCGCG TERM 2392 2044655 - 2044643 - G 91 -3.3 -5.52096 | overlap 2044644 AAAGCGAAGAAAAAA GCGAG AAC CTTGC CAGCTCCCGGAAACC TERM 2393 2045306 - 2045282 - G 79 -3.5 -5.11613 | gap 1 ATATGACCGAAAAAA GCCATACGGG ACAGAG CCCGC-CGGC TAAAATCAAATTTTT TERM 2394 2045508 - 2045488 - R 100 -11.2 -5.86061 | opp_overlap 2045488 CCGCAGCAAAAAAAA GACGACAG ATCAG CTGTCGTC TTTTTTTTATCCCCT TERM 2395 2045488 - 2045508 + r 100 -11.2 -5.94713 | opp_overlap 2045488 CCGCAGCAAAAAAAA GACGACAG ATCAG CTGTCGTC TTTTTTTTATCCCCT Paes_1872 2046383 - 2045577 - | Peptidoglycan-binding domain 1 protein Paes_1873 2047320 - 2046562 - | hypothetical protein Paes_1874 2047731 - 2047507 - | hypothetical protein Paes_1875 2048569 - 2047688 - | Domain of unknown function DUF1848 TERM 2396 2048501 - 2048489 - GH 70 -4.1 -4.60924 | overlap 2048479 2048478 TAAACGGTTGAAAAA CCACT GCG AGTAG AATGCCGGAATATCG TERM 2397 2048731 - 2048720 - H 74 -5.8 -4.70169 | CTATACTGAAGAAAA GAGC GATG GCTC CCGTATTGCGGCGAT Paes_1876 2048782 - 2049387 + | Tetratricopeptide TPR_2 repeat protein Paes_1877 2049633 - 2051060 + | isochorismate synthase Paes_1878 2051141 - 2052877 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 2398 2053640 - 2053655 + G 77 -3.2 -5.03314 | opp_overlap 2053626, overlap 2053625 2053642 ACAGGCGTTTGTTTC TCCAGC GCCT GCTGAA TTTTTTGAACATGCA Paes_1879 2052877 - 2053689 + | alpha/beta hydrolase fold TERM 2399 2054365 - 2054349 - g 77 -10.1 -3.56643 | CTGAGATGCCTCAAA TCGGCGC TCA ACGCCGA CTGCGACGGCCAGGC TERM 2400 2054470 - 2054453 - g 75 -4.9 -4.7629 | CCAGGAAGGTAAAAA CGCTTTT GTCG AAAAACG TAAGCCGGATTTCGG Paes_1880 2053686 - 2054507 + | naphthoate synthase TERM 2401 2054868 - 2054844 - g 71 -9.3 -3.52652 | overlap 2054847 TTCAGGCAAGCATAA CAGGGCAATTC CCG GAACTGCCTTG CGGCCCGGAACCGGC Paes_1881 2054504 - 2055601 + | Mandelate racemase/muconate lactonizing protein Paes_1882 2055589 - 2057031 + | O-succinylbenzoate-CoA ligase Paes_1883 2058129 - 2057050 - | NADH:flavin oxidoreductase/NADH oxidase TERM 2402 2058310 - 2058285 - R 100 -14.7 -3.524 | overlap 2058286 CATCCATGCATAGAA CTGCCGCCGTG GTGG CACGGCGGCAT AGACACGCTTACCCA TERM 2403 2058309 - 2058286 - R 100 -18.2 -2.71119 | overlap 2058285 ATCCATGCATAGAAC TGCCGCCGTG GTGG CACGGCGGCA TAGACACGCTTACCC Paes_1884 2059545 - 2058319 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2404 2059806 - 2059787 - R 77 -3.5 -5.20735 | GGAATAAAAAAGAAA GTTCTGC AAATCA GCAGCAC AAAAGTGAGAGAGAA Paes_1885 2060468 - 2059941 - | hypothetical protein TERM 2405 2060238 - 2060222 - G 76 -7.9 -4.27617 | overlap 2060231 GATAGCTGATGAAAA CGGAAGC AAT GCTGCCG GCAACACCGGAAAAA TERM 2406 2060386 - 2060355 - G 77 -3 -5.04987 | gap 1 AATACCGGCAAAAAA CAGCGCGTTGATCAG GGT CAGAT-AAGGCACTG TTGTCGTGAGGACGA TERM 2407 2060428 - 2060408 - G 74 -10.4 -3.45023 | opp_overlap 2060407 2060405 TGAGGACGATCAGAA GGGCGCCT CTTGC AAGCGCCC GTAATTTCTCTTTCT Paes_1886 2061236 - 2060490 - | Dihydrodipicolinate reductase TERM 2408 2060736 - 2060752 + g 70 -3.6 -4.63486 | TTTGCGGTCTTCAGA CAGGGC AGAAA GCACTG TTTTCTTGCGGGGAT Paes_1887 2062187 - 2061303 - | parB-like partition protein Paes_1888 2063020 - 2062223 - | Cobyrinic acid ac-diamide synthase TERM 2409 2063326 - 2063306 - g 74 -3.2 -4.91511 | ATGCGAGCAGAAAAA TGACCCCG AGAAA CAGTGTCA TGTTCCGCAATCCGG Paes_1889 2063131 - 2063757 + | DNA-3-methyladenine glycosylase Paes_1890 2063831 - 2065213 + | magnesium transporter TERM 2410 2065710 - 2065665 - g 80 -11.3 -3.30619 | gap 1, opp_overlap 2065685 2065686, overlap 2065652 2065693 2065708 AAGCAGCCGGGATAA CCGTGCTTGACAACACGGCT GCGGCAA AGCCG-GTTATCGAACACGG CCGGCTGACAGCGAT Paes_1891 2065250 - 2066920 + | Electron-transferring-flavoprotein dehydrogenase TERM 2411 2067175 - 2067185 + G 93 -8.2 -5.08824 | CGATCTTGATGAGTA CCGG TTT CCGG TTTTTTCGCTGAACC TERM 2412 2067445 - 2067427 - g 72 -6 -4.41512 | TGATAACAAAAAAGA CCAGAG CTATTTT CTCTGG ATGCTCGGCAGAAAG TERM 2413 2067994 - 2067982 - g 72 -4.7 -4.63527 | CGATGAGCCGAAAAA CGCCG TCA CGCCG GGTCAGGCCATCGTC Paes_1892 2066984 - 2068072 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Paes_1893 2068109 - 2068780 + | phospholipase/Carboxylesterase TERM 2414 2070859 - 2070843 - g 73 -3.6 -4.79826 | AGACACGACGAAAAA CAGCCC GAAAA AGGCCG AGTGGCGCAACGAAA TERM 2415 2071323 - 2071297 - g 70 -5 -4.57073 | overlap 2071300 2071303 2071313 GATGCCGCTGAAAAA GAACATGCCGAT ATC ATCGGCCTGAGC GGCCTGATCACCCCC TERM 2416 2071320 - 2071300 - g 90 -9.7 -4.40561 | overlap 2071297 2071303 2071313 GCCGCTGAAAAAGAA CATGCCGAT ATC ATCGGCCTG AGCGGCCTGATCACC TERM 2417 2072580 - 2072569 - g 77 -5.8 -4.59773 | TCGGAGGTTGAAAAA TGGC TGGC GCCA AACCTCAACTACACG Paes_1894 2068912 - 2072601 + | methionine synthase TERM 2418 2072617 - 2072633 + T 74 -7.2 -4.21194 | opp_overlap 2072611 2072617 CCAACGATACCAAAA CCCCGT CGAAA GCGGGG TTTTGCATGATCAGA TERM 2419 2072633 - 2072617 - T 73 -6.5 -4.39287 | opp_overlap 2072617, overlap 2072611 CCAACGATACCAAAA CCCCG TCGAAAG CGGGG TTTTGCATGATCAGA Paes_1895 2074341 - 2072644 - | Peptidoglycan-binding domain 1 protein Paes_1896 2075087 - 2074359 - | hypothetical protein Paes_1897 2075933 - 2075364 - | hypothetical protein TERM 2420 2075471 - 2075461 - G 79 -2.4 -5.18357 | CAATTGACGAAAAAA CCGG CAA CCGC CTCCCATAGCACTAT TERM 2421 2075766 - 2075733 - G 86 -5.9 -5.07652 | TGTCGCAAAAGAAAA GCGGATGATAAAACC AATC GGACCTATCTCCCGC ACGCATTCAAGCAGA Paes_1898 2076689 - 2075979 - | protein of unknown function DUF541 Paes_1899 2076815 - 2077699 + | hypothetical protein TERM 2422 2077763 - 2077731 - T 100 -12.7 -3.73775 | opp_overlap 2077724 2077731 TGCATCCTCAGCAAA GCCGTCTTTTCCTGA TCC CCCGGAAAAGGCGGC TTTTTTCCTGATCTC TERM 2423 2077731 - 2077763 + T 100 -14.2 -5.20216 | opp_overlap 2077731, overlap 2077724 TGCATCCTCAGCAAA GCCGTCTTTTCCTG ATCCC CCGGAAAAGGCGGC TTTTTTCCTGATCTC Paes_1900 2078462 - 2077782 - | hypothetical protein TERM 2424 2078085 - 2078073 - G 75 -5.5 -4.64861 | GCCGGGCAAAAGAAA CAGCA CCA TGCCG ATAGTCACAAGAATC TERM 2425 2078315 - 2078300 - G 72 -4.7 -4.63863 | TTAAGAGAAAAAGAA TCAGG GTAAAT CCTGA AAACTCAGCGGCATG TERM 2426 2078780 - 2078768 - g 80 -5.5 -4.95155 | opp_overlap 2078768 2078766, overlap 2078762 TTGATAGCACAAAAA GCACC GAT AGTGC TCTTCGATGTTCGTC Paes_1901 2078648 - 2079127 + | Rhodanese domain protein Paes_1902 2079821 - 2079159 - | hypothetical protein TERM 2427 2080734 - 2080746 + G 82 -3.4 -5.31456 | ATTCTGGAAAAGCCC TCAC CGGAT GTGA TTTTTTATGAATTCG Paes_1903 2080068 - 2080979 + | MscS Mechanosensitive ion channel TERM 2428 2080971 - 2080957 - f 70 -7 -4.12532 | overlap 2080958 CTTCCGATACAGAAA GCCGCG ACT CGCGGT CAGGATAAATGCTTC TERM 2429 2080970 - 2080958 - f 73 -10.5 -3.07198 | overlap 2080957 TTCCGATACAGAAAG CCGCG ACT CGCGG TCAGGATAAATGCTT TERM 2430 2081212 - 2081200 - g 72 -4.7 -4.59109 | overlap 2081202 GACATGGTCGAAAAA GCCGG ATC CGGGC ACCCCGGTATGCCAA TERM 2431 2081220 - 2081249 + G 80 -11.5 -3.31726 | gap 1, opp_overlap 2081202, overlap 2081218 2081223 ATCCGGGCACCCCGG TATGCCAATGGGGG CCG CCCCCA-TGGCCTA TGTTCTCTGGACAAA TERM 2432 2081223 - 2081246 + G 80 -13.2 -2.53249 | gap 1, opp_overlap 2081202, overlap 2081220 2081218 CGGGCACCCCGGTAT GCCAATGGGGG CCG CCCCCA-TGGC CTATGTTCTCTGGAC TERM 2433 2081976 - 2081962 - g 83 -5.7 -5.14965 | ATGGTCAGGAAAAAA TTCGG TTTTC CCGAA GATGAATCATTCGTC TERM 2434 2082132 - 2082157 + G 81 -11.1 -3.63569 | opp_overlap 2082133, overlap 2082133 CGACCTTATCAATAA ACGTCTGCCGG ACTC CTGGCAGACGC TTCTTCCCGAATTCA TERM 2435 2082133 - 2082156 + G 90 -14.6 -2.7782 | opp_overlap 2082133, overlap 2082132 GACCTTATCAATAAA CGTCTGCCGG ACTC CTGGCAGACG CTTCTTCCCGAATTC TERM 2436 2082156 - 2082133 - g 100 -13.2 -4.25056 | gap 1, opp_overlap 2082133 2082132 GACCTTATCAATAAA CGTCTGCC-GG ACT CCTGGCAGACG CTTCTTCCCGAATTC Paes_1904 2081128 - 2083134 + | transketolase TERM 2437 2083443 - 2083393 - g 75 -11.4 -2.94337 | gap 3, opp_overlap 2083392 2083393 CATGGGAAAAGATCA TGCTGTTCTGGGGCGAT-GAGCGGT GCGT ACCGCTCAATCACCCG-G-ACAGCA ATTTCCGTATGGCCC TERM 2438 2083393 - 2083443 + G 73 -11.9 -2.82327 | gap 1, opp_overlap 2083393, overlap 2083392 CATGGGAAAAGATCA TGCTGTTCTGGGGCGATGAGCGGT GCGT ACCGCTCAATCACCC-GGACAGCA ATTTCCGTATGGCCC TERM 2439 2083485 - 2083445 - g 81 -12.7 -3.26471 | opp_overlap 2083445 TCACCCGGACAGCAA TTTCCGTATGGCCCAGGAG TCA CTCCTGAACTATACCGAAA TTCCTGAGAACAATA TERM 2440 2083445 - 2083485 + G 74 -10.5 -3.14344 | opp_overlap 2083445 TCACCCGGACAGCAA TTTCCGTATGGCCCAGGAG TCA CTCCTGAACTATACCGAAA TTCCTGAGAACAATA Paes_1905 2083146 - 2083979 + | 6-phosphogluconolactonase Paes_1906 2085373 - 2083940 - | glucose-6-phosphate 1-dehydrogenase TERM 2441 2084379 - 2084367 - G 74 -3.4 -4.96848 | GCCTTCATATAAAAA GGAA CCCCT TTCC AGCGCCAGTTATCGA TERM 2442 2085021 - 2085010 - G 93 -5.8 -5.22039 | TCGAAAGGTAAAAAA GCAG ATTA CTGC AAGTCCCCTCCCGCC Paes_1907 2086265 - 2085378 - | 6-phosphogluconate dehydrogenase, decarboxylating Paes_1908 2089273 - 2086298 - | multi-sensor hybrid histidine kinase TERM 2443 2086581 - 2086569 - G 70 -4.1 -4.65078 | overlap 2086579 ATATCGTCAAGAAAA TGCTC GAT AAGCA TGATGGCGATTTCGC TERM 2444 2086604 - 2086579 - G 80 -11.9 -3.33009 | overlap 2086569 GAAAATGCTCGATAA GCATGATGGCG ATTT CGCGATCATGC TGCAGACGATCAAGC TERM 2445 2087625 - 2087646 + g 71 -3.1 -4.83169 | gap 1, overlap 2087617 TTTTCAGGTGAGCTC TGAACA-TGG ATC TCACTGTTCA TTTTTCTGGCAAGCT TERM 2446 2088059 - 2088031 - G 71 -11.1 -2.84803 | opp_overlap 2088031, overlap 2088039 CCAATACATCAAGCA GGTCGAAATCGAG ATA CTCGATTTCAAGC TTGTTTGCTTCGATT TERM 2447 2088031 - 2088059 + g 77 -8.9 -4.09923 | opp_overlap 2088031 2088039 CCAATACATCAAGCA GGTCGAAATCGAG ATA CTCGATTTCAAGC TTGTTTGCTTCGATT TERM 2448 2088973 - 2088961 - G 73 -9.1 -3.64198 | GGTTCATATAGATAA CGCGA TGA TCGCG ATCTACACAAATGAT Paes_1909 2090512 - 2089286 - | domain of unknown function DUF1745 Paes_1910 2091299 - 2090580 - | protein of unknown function DUF541 TERM 2449 2092792 - 2092779 - g 79 -2.3 -5.23292 | TGACAGAAAAGAAAA CCGGT GCCC ACTGG CAAACAGCATTTATC Paes_1911 2091416 - 2092900 + | hypothetical protein TERM 2450 2093381 - 2093359 - g 93 -15 -3.03124 | overlap 2093364 CTCGACCGGGCAACA CTGAACCTTG CCG CAAGGTTCAG CCCCACAATCGTTTA Paes_1912 2092900 - 2093928 + | succinylglutamate desuccinylase/aspartoacylase TERM 2451 2093969 - 2093942 - T 70 -6.4 -4.2338 | gap 1, overlap 2093949 GACCAATAGAAAGAA TTCAGAAGATCAG GAG CTGATC-CCCGAA CCACCTTCGACAAGT TERM 2452 2093963 - 2093949 - T 71 -8.6 -3.50541 | overlap 2093942 AGAAAGAATTCAGAA GATCAG GAG CTGATC CCCGAACCACCTTCG Paes_1913 2095087 - 2093951 - | glycosyl transferase group 1 TERM 2453 2094579 - 2094556 - G 73 -3.8 -4.81083 | GCGAAGGACGAAAAA GATCACGG TCTATTCC CCGCGACC AGAGCTCAACGGTAG TERM 2454 2094754 - 2094738 - G 72 -5.1 -4.48333 | AGATAGGAAGGAAAA TCGGTAT GAT AGACCGA TCCTGCAGGAAGCTT TERM 2455 2095140 - 2095114 - R 100 -2.9 -5.95539 | overlap 2095117 2095118 2095127 CGCTAAAGAAAAAAA CAACCCGACAG AACGG CCATCGGACCG CCTTCAGCCAGGCAT TERM 2456 2095152 - 2095117 - R 72 -3.2 -5.01858 | gap 1, opp_overlap 2095140, overlap 2095114 2095118 2095127 TAAAGAAAAAAACAA CCCGACAGAACGGCCAT CGG ACCGCC-TTCAGCCAGG CATTACTGATACAGT Paes_1914 2095867 - 2095403 - | YbaK/prolyl-tRNA synthetase associated region TERM 2457 2095567 - 2095579 + g 70 -10.5 -2.70932 | opp_overlap 2095555 2095553 ACAGGTTGCCGAACG GGGGC ATG GCCCC TACTTCGCAGCCAGG TERM 2458 2095945 - 2095909 - R 100 -16.5 -3.88232 | opp_overlap 2095912, overlap 2095912 CCCCCGATACAACAA GGACCGCCGCCGGCAAC CGA GATACCGACGGCGGTTC AGTAAGCGTTTAAGA TERM 2459 2095942 - 2095912 - R 100 -16.8 -3.01243 | opp_overlap 2095912, overlap 2095909 CCGATACAACAAGGA CCGCCGCCGGCAAC CGA GATACCGACGGCGG TTCAGTAAGCGTTTA TERM 2460 2095912 - 2095942 + r 83 -12.4 -3.07307 | opp_overlap 2095912 2095909 CCGATACAACAAGGA CCGCCGCCGGCAAC CGA GATACCGACGGCGG TTCAGTAAGCGTTTA Paes_1915 2097792 - 2095972 - | hypothetical protein TERM 2461 2098070 - 2098045 - R 100 -13.3 -5.83822 | CAGAGCGAAAAAAAA GCCGACTGCAA CTAT CTGCAGCCGGC TGAAATAAAGAAAGG TERM 2462 2098145 - 2098120 - R 77 -9 -3.72395 | AGAAGCCAAAACGAA CGCCAGCCAT CAGGTT ATGGCTGCCG AGAGAAACATCAACA Paes_1916 2098723 - 2098103 - | porin opacity type TERM 2463 2098783 - 2098762 - R 72 -6.7 -4.18018 | gap 1, opp_overlap 2098765, overlap 2098766 CTGTTTCATTCAAAA TCAA-GCATG ATA CATGCGTTGA TAGAACCGAATTTAC Paes_1917 2099627 - 2098824 - | Patatin Paes_1918 2101056 - 2099629 - | Aldehyde Dehydrogenase TERM 2464 2101509 - 2101483 - g 100 -13.8 -5.82172 | opp_overlap 2101483 2101486 ATGAAGAGAAAAAAA GCACGACTGCAA ACC TTGCAGCCGTAC TTCTTCAGATCGCCA TERM 2465 2101483 - 2101509 + G 73 -9.4 -3.65046 | opp_overlap 2101483, overlap 2101486 ATGAAGAGAAAAAAA GCACGACTGCAA ACC TTGCAGCCGTAC TTCTTCAGATCGCCA TERM 2466 2101838 - 2101826 - g 79 -4.8 -5.00884 | ACGTCTGCGAAAAAA CGGT TCCAG ACCG GTCCATCTCCACAAA Paes_1919 2101128 - 2101889 + | Integral membrane protein TerC TERM 2467 2102832 - 2102820 - g 83 -5.5 -5.10029 | AGGAAGCCGAAAAAA GCAGT TCC ACCGC TACAGGGTCAATGTG Paes_1920 2101909 - 2104335 + | peptidase S16 lon domain protein TERM 2468 2104763 - 2104748 - g 71 -3.2 -4.7657 | overlap 2104741 2104749 GAAAAACGGGAAAAA CTCCGG TCTG CCGAAA AAAAATGGGAACAAC Paes_1921 2104339 - 2105211 + | UspA domain protein Paes_1922 2105595 - 2105257 - | hypothetical protein Paes_1923 2106532 - 2105735 - | tRNA/rRNA methyltransferase (SpoU) TERM 2469 2106284 - 2106307 + g 78 -9.6 -3.87815 | GGCAAGGCGTCTCAT CTCTTCCTGC TCAA GCAGGAACAG TTTCTCACGGTAGCG Paes_1924 2107338 - 2106529 - | hypothetical protein TERM 2470 2106681 - 2106693 + g 82 -3.3 -5.23316 | CAGAGGATCTATCAC GACCT GCA AGGAC TTTTTTGATATAATC TERM 2471 2107020 - 2107044 + g 80 -5.7 -5.00616 | opp_overlap 2107009, overlap 2107021 AAAAGGGGGGCTGCA AGGCAGAAG CCCGGCC CTTCTGCCG TTTTTTCCGCCCCCC TERM 2472 2107021 - 2107043 + g 73 -9.2 -3.60048 | opp_overlap 2107009, overlap 2107020 AAAGGGGGGCTGCAA GGCAGAAG CCCGGCC CTTCTGCC GTTTTTTCCGCCCCC TERM 2473 2107199 - 2107181 - G 81 -6.6 -4.63486 | overlap 2107197 ATCCCTTTAAGAAAA GCGATCCC CAG GAGAACGC CTACGGCAGCAAGAA TERM 2474 2107763 - 2107744 - g 82 -3.4 -5.1861 | opp_overlap 2107744 2107747, overlap 2107745 CGCAGCAGCAAAAAA GGCCGGCA TCGA TGCCGTCA TCTGCTGGGATGTGG Paes_1925 2107475 - 2108719 + | peptidase U32 TERM 2475 2108778 - 2108816 + F 91 -6.8 -5.43514 | TTAATAACCAACGTC CCTGTTCTGAAAAAACAA TTG TTAATTTTACAGGACAGG TTTTTTGATTATTTT Paes_1926 2108963 - 2110042 + | hydrogenase/sulfur reductase, beta subunit Paes_1927 2110003 - 2110920 + | oxidoreductase FAD/NAD(P)-binding domain protein TERM 2476 2111345 - 2111357 + G 78 -10.5 -3.53012 | GTCGATTTCAGCATT CCGGG GTG CCCGG TTTCAAAAGAAGAGG Paes_1928 2110931 - 2111695 + | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 2477 2112134 - 2112114 - g 77 -8.9 -4.00868 | GGACTGAGAATGAAA GCTGCCGGC AAC GCCATCAGC GAGATCGTCACCGGA Paes_1929 2111682 - 2112959 + | nickel-dependent hydrogenase large subunit Paes_1930 2113875 - 2113015 - | hypothetical protein TERM 2478 2113941 - 2113906 - R 100 -18.4 -3.55323 | opp_overlap 2113899 AAAAAGGTGAGAGAA CCTCCCTTCGCTCCCT GAAA AGGGAGTAAAGGGAGG CGAAACAATCAGGCA Paes_1931 2114378 - 2113950 - | peptidylprolyl isomerase FKBP-type TERM 2479 2113994 - 2113980 - G 90 -10 -4.29845 | TAACTCAATCGAAAA GGTCAG GTC CTGACC TGCAAGAGGATGATT TERM 2480 2114070 - 2114057 - G 71 -9.5 -3.44527 | overlap 2114044 CAGTCACCATCACAA CGGCC GTCT GGCCG TTGGCCATGCTGACC Paes_1932 2114651 - 2115334 + | surface antigen msp4 family protein TERM 2481 2115360 - 2115389 + T 89 -14.5 -2.84955 | opp_overlap 2115366, overlap 2115366 TTCTCCATCTCATCA TAAAAAGGGTCGT TTAT GCGACCCTTTTTA TGTGCTGCTCATTGT TERM 2482 2115366 - 2115383 + T 93 -9.1 -5.01497 | opp_overlap 2115366, overlap 2115360 ATCTCATCATAAAAA GGGTCGT TTAT GCGACCC TTTTTATGTGCTGCT TERM 2483 2115383 - 2115366 - T 91 -8.4 -4.91511 | opp_overlap 2115366 2115360 ATCTCATCATAAAAA GGGTCG TTTATG CGACCC TTTTTATGTGCTGCT Paes_1933 2116463 - 2115387 - | MscS Mechanosensitive ion channel TERM 2484 2115939 - 2115923 - G 74 -10.1 -3.43492 | overlap 2115925 CTATACCGATGATAA TACCGGC AAC GCCGGCA GAAGCCAACAGACTT TERM 2485 2115937 - 2115925 - G 76 -10.5 -3.28714 | overlap 2115923 ATACCGATGATAATA CCGGC AAC GCCGG CAGAAGCCAACAGAC TERM 2486 2116267 - 2116241 - G 81 -5 -5.07486 | GAGGCTGAAGAAAAA GGGCGACCGCGA TAA TGAAGGTCACCC TGAAGGGAATCTGGA Paes_1934 2117701 - 2116511 - | amine oxidase Paes_1935 2117836 - 2117726 - | hypothetical protein Paes_1936 2118369 - 2117836 - | acetyltransferase, CysE/LacA/LpxA/NodL family TERM 2487 2118542 - 2118530 - g 70 -4.1 -4.59853 | GGAAGTCGTCAAAAA CTCCA CAA TAGAG GTCAGACAGGGCGAA Paes_1937 2118465 - 2119199 + | ABC transporter related TERM 2488 2120368 - 2120391 + G 90 -10.2 -4.33248 | opp_overlap 2120361 AAAACAATCCAGCGT GCCGGTCTTG AAGT CCAGGCCGGC TTTATTGTCGGGTTC Paes_1938 2119435 - 2120937 + | Radical SAM domain protein TERM 2489 2121873 - 2121883 + G 86 -6.8 -5.01732 | GATCACGCCGCATAC GCTC ACC GAGC TTTTTTACAGCAATT Paes_1939 2121022 - 2122443 + | metal dependent phosphohydrolase Paes_1940 2122561 - 2122908 + | hypothetical protein TERM 2490 2123409 - 2123394 - g 71 -2.4 -4.91109 | TCTCGAGGATAAAAA CCCTGC TGTG GCGGAG ACCTTCAAAGCAATC Paes_1941 2122915 - 2123700 + | alpha/beta hydrolase fold TERM 2491 2123738 - 2123707 - T 100 -11.7 -5.40072 | gap 1, opp_overlap 2123732 2123733 CTTGCCTGAAAAAAA GCCCGGACGTTCCA TTGCG TGAAAC-TCCGGGC CATGAGGTTCGGCTT Paes_1942 2125130 - 2123826 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2492 2124903 - 2124886 - G 74 -3.4 -4.91109 | overlap 2124887 TCCGGAGCAGAAAAA CTCCAG AGTCCG CTGGAA TGAAGAACAACATGA TERM 2493 2125174 - 2125194 + r 73 -9 -3.43328 | gap 1, opp_overlap 2125174 TTCTGTATAAAAAAA GCAGC-CCC GAAC GGGAGCTGC TTCATATGTTTCCTG TERM 2494 2125194 - 2125174 - R 100 -10.4 -5.60993 | opp_overlap 2125174 TTCTGTATAAAAAAA GCAGCCCC GAACG GGAGCTGC TTCATATGTTTCCTG Paes_1943 2125418 - 2125221 - | ribosomal protein S21 Paes_1944 2126070 - 2125444 - | hypothetical protein TERM 2495 2125578 - 2125591 + g 86 -3.8 -5.40072 | TAATGACATGAGCGC CGCT TCCTGT AGCG TTTTTTTCACGAACA Paes_1945 2127600 - 2126227 - | Cysteine synthase TERM 2496 2127997 - 2127987 - g 75 -5.4 -4.66833 | opp_overlap 2127987 CTGCAATGTCAAAAA GATC CGC GATC TGATTGGTAAAGAAC TERM 2497 2128551 - 2128531 - g 72 -8.2 -3.73402 | overlap 2128533 AGATCGGTCATCAAA CACGCCGC AGGCA GCGGCGCA ATCATCTGCCAGAAG TERM 2498 2128549 - 2128533 - g 78 -10.8 -3.45027 | overlap 2128531 ATCGGTCATCAAACA CGCCGC AGGCA GCGGCG CAATCATCTGCCAGA Paes_1946 2127877 - 2129037 + | alanine racemase Paes_1947 2129060 - 2129548 + | ComEA-related protein Paes_1948 2129549 - 2130418 + | hypothetical protein Paes_1949 2131449 - 2130430 - | aspartate-semialdehyde dehydrogenase TERM 2499 2130741 - 2130776 + g 83 -6.3 -4.95758 | gap 1, opp_overlap 2130732 2130759 CAGGAATTCTGACCG TCGTGGGAGA-GAC AGAAAGAGA GTCGTCTCCCATGA TTTTTCTGGTCTCGT Paes_1950 2132512 - 2131469 - | TIM-barrel protein, nifR3 family Paes_1951 2133563 - 2132514 - | recA protein TERM 2500 2132830 - 2132848 + g 83 -5.2 -5.04325 | overlap 2132810 CCGATAATATCGACA CCGTCC TTGATCT GGGCGG TTTTTCTGATTTCCA Paes_1952 2134642 - 2133617 - | NAD-dependent epimerase/dehydratase Paes_1953 2134736 - 2136013 + | peptidase M16 domain protein TERM 2501 2137031 - 2137017 - g 71 -2.8 -4.77759 | overlap 2137018 ATAACCCAGGAAAAA TTCGAT TCA ATCGAC GCCTTCACTCAGGAT Paes_1954 2136255 - 2137541 + | trigger factor TERM 2502 2137548 - 2137532 - T 75 -8.7 -3.82202 | CATTCCCAAACACAA TCACCGC TAA GCGATGA GGACGGACAGGACAC TERM 2503 2137602 - 2137561 - T 79 -12 -2.65264 | gap 1, opp_overlap 2137571, overlap 2137571 TGAGGACGGACAGGA CA-CAAAAAAAGCAGGTAT TTCCC ATACCTGCTTTTTTTACTG CCATCTACTCTCTTT TERM 2504 2137591 - 2137571 - T 100 -9.8 -5.74122 | opp_overlap 2137571, overlap 2137561 CAGGACACAAAAAAA GCAGGTAT TTCCC ATACCTGC TTTTTTTACTGCCAT TERM 2505 2137571 - 2137591 + T 100 -9.8 -5.52986 | opp_overlap 2137571 2137561 CAGGACACAAAAAAA GCAGGTAT TTCCC ATACCTGC TTTTTTTACTGCCAT Paes_1955 2138559 - 2137681 - | nicotinate-nucleotide pyrophosphorylase Paes_1956 2138783 - 2139172 + | dihydroneopterin aldolase Paes_1957 2139169 - 2139672 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2506 2139744 - 2139711 - T 100 -21.9 -3.30243 | opp_overlap 2139720, overlap 2139712 2139720 AGCCATCCTGCAGAA CGCAGAAAAGGCCCC TTCC GGGGCCTTTTCTGCA CAAGTGATCCTGAAA TERM 2507 2139743 - 2139712 - T 100 -23.2 -2.57931 | opp_overlap 2139720, overlap 2139711 2139720 GCCATCCTGCAGAAC GCAGAAAAGGCCCC TTCC GGGGCCTTTTCTGC ACAAGTGATCCTGAA TERM 2508 2139720 - 2139735 + T 95 -11.8 -4.3739 | opp_overlap 2139712 2139711 2139720 GCAGAACGCAGAAAA GGCCCC TTCC GGGGCC TTTTCTGCACAAGTG TERM 2509 2139735 - 2139720 - T 100 -11.8 -4.49337 | opp_overlap 2139720, overlap 2139712 2139711 GCAGAACGCAGAAAA GGCCCC TTCC GGGGCC TTTTCTGCACAAGTG Paes_1958 2140923 - 2139769 - | arsenite-activated ATPase ArsA TERM 2510 2140753 - 2140740 - G 70 -6.7 -4.11216 | CTTCCATGGCGAAAA GGTTG TTTT CAACC TCAACGGGTGTCGCG Paes_1959 2142631 - 2140937 - | hypothetical protein TERM 2511 2142855 - 2142827 - R 100 -11.2 -5.98675 | gap 1, opp_overlap 2142822 2142832 CATAAAAACAAAAAA GGCAGTTGATAGT TTGC ACTATCA-CTGCC TTGAAGTTTGCATGC Paes_1960 2143125 - 2142880 - | bacteriochlorophyll C binding protein Paes_1961 2143679 - 2143260 - | chlorosome envelope protein C TERM 2512 2143364 - 2143374 + g 75 -5.4 -4.67353 | CAGCGTTATCAGTCA CGTT CTC AACG TTTTTGACTGCATCG Paes_1962 2145025 - 2143808 - | arsenite-activated ATPase ArsA TERM 2513 2144719 - 2144698 - G 85 -3 -5.39721 | overlap 2144699 TCAGCAGAGAAAAAA GTTCTTCC ATACCG GGAAGAAT CGTCATTTCATCAGC TERM 2514 2144783 - 2144798 + g 79 -4 -5.10933 | gap 1 TCTGGTATAATATTT CTGGACA GCC TG-CCAG TTTTCTTTTAAATCA Paes_1963 2145326 - 2146123 + | oxidoreductase FAD/NAD(P)-binding domain protein Paes_1964 2146178 - 2146678 + | single-strand binding protein TERM 2515 2146731 - 2146699 - f 72 -9.9 -3.14344 | opp_overlap 2146699 2146698 2146696, overlap 2146702 GACCTGCCGTATCAA CCATCACCGGAAC TGGAAGG GCTCCGGTGATGC CTCTTAATCATCGAC TERM 2516 2146728 - 2146702 - f 71 -10.2 -2.77899 | opp_overlap 2146699 2146698 2146696, overlap 2146699 CTGCCGTATCAACCA TCACCGGAAC TGGAAGG GCTCCGGTGA TGCCTCTTAATCATC Paes_1965 2146748 - 2147797 + | DNA polymerase III, delta subunit Paes_1966 2148802 - 2147807 - | NAD-dependent epimerase/dehydratase Paes_1967 2149119 - 2150321 + | 8-amino-7-oxononanoate synthase TERM 2517 2152941 - 2152965 + G 74 -7.9 -4.13341 | TGAATGGTTCCGCGC TCCGGGAAGAA GTT TTATTCTCGGA TTTGATTTCGTCTAT Paes_1968 2150497 - 2152983 + | TonB-dependent receptor TERM 2518 2153013 - 2153045 + F 100 -15.7 -4.13014 | opp_overlap 2153018 2153020, overlap 2153020 ATTTCCTGCAGTTTA CAGAAGAGCCCCTTA TAT TCAGGGGCTTTTCTG TTTTCAGGATCTGCC TERM 2519 2153020 - 2153038 + F 91 -8.8 -4.89567 | opp_overlap 2153020 2153018, overlap 2153013 GCAGTTTACAGAAGA GCCCCTTA TAT TCAGGGGC TTTTCTGTTTTCAGG TERM 2520 2153762 - 2153743 - g 72 -10.8 -3.10796 | TGTGATCAGCGAATA CTTTGACG TACC CGTCAAAG CAGACAAGGTTATCG TERM 2521 2153974 - 2153990 + G 79 -2.2 -5.20333 | overlap 2153961 TATTGAGGCTCGCGG CCTGAA TGTCC TTCCGG TTTTTGTTATGGGTG TERM 2522 2154260 - 2154218 - g 83 -5.7 -5.09225 | opp_overlap 2154224 2154228 ACCTCATGGAAAAAA GAAG-GTGTTGTGCCATTGCA GTC TGCAATGAC-CTACTCTCTTC CGGAAATGGACGGAG Paes_1969 2153189 - 2156995 + | magnesium chelatase, H subunit TERM 2523 2157054 - 2157010 - T 100 -18.8 -3.43944 | opp_overlap 2157018 2157024, overlap 2157011 2157014 2157024 ATCAGGAACTGACAA TCCACACAGAAAAAGGCGCC AGTAA GGCGCCTTTTTCTGTGTAAG CAATATTCGTCATGA TERM 2524 2157053 - 2157011 - T 100 -22.3 -2.65884 | opp_overlap 2157018 2157024, overlap 2157010 2157014 2157024 TCAGGAACTGACAAT CCACACAGAAAAAGGCGCC AGTAA GGCGCCTTTTTCTGTGTAA GCAATATTCGTCATG TERM 2525 2157050 - 2157014 - T 100 -24 -2.61602 | opp_overlap 2157018 2157024, overlap 2157011 2157010 2157024 GGAACTGACAATCCA CACAGAAAAAGGCGCC AGTAA GGCGCCTTTTTCTGTG TAAGCAATATTCGTC TERM 2526 2157018 - 2157046 + T 100 -17.6 -2.88427 | opp_overlap 2157014 2157011 2157010 2157024, overlap 2157024 CTGACAATCCACACA GAAAAAGGCGCC AGTAA GGCGCCTTTTTC TGTGTAAGCAATATT TERM 2527 2157024 - 2157040 + T 100 -10.8 -5.03994 | opp_overlap 2157024 2157014 2157011 2157010, overlap 2157018 ATCCACACAGAAAAA GGCGCC AGTAA GGCGCC TTTTTCTGTGTAAGC TERM 2528 2157040 - 2157024 - T 100 -10.8 -5.04597 | opp_overlap 2157018 2157024, overlap 2157014 2157011 2157010 ATCCACACAGAAAAA GGCGCC AGTAA GGCGCC TTTTTCTGTGTAAGC Paes_1970 2158194 - 2157076 - | cell shape determining protein MreB/Mrl Paes_1971 2158539 - 2158252 - | hypothetical protein TERM 2529 2158504 - 2158527 + g 93 -14.6 -3.06183 | opp_overlap 2158504 CAAATGCAAAAAAAA GGCGGACAGT ATTT GCTGTCCGCC TTGCATCACCATCCC TERM 2530 2158527 - 2158504 - G 100 -13.9 -5.89947 | opp_overlap 2158504 CAAATGCAAAAAAAA GGCGGACAG TATTTG CTGTCCGCC TTGCATCACCATCCC Paes_1972 2162148 - 2158555 - | outer membrane autotransporter barrel domain protein TERM 2531 2162691 - 2162708 + G 73 -11.3 -2.78384 | CGTTTGTTCATTCAG GCGCATG GCTC CATGCGC TCTCATCGAAACCCG Paes_1973 2162474 - 2162866 + | hypothetical protein TERM 2532 2163113 - 2163103 - g 75 -6.8 -4.32177 | GGACTTCATAACAAA CAGG AAA CCTG GCTCGAACTCGAAAA TERM 2533 2163560 - 2163550 - g 78 -5.4 -4.83169 | ATCCCCGGAGAAAAA GGAA AAC TTCC GCAAGAGGACCCGCT TERM 2534 2166392 - 2166376 - g 83 -6.5 -4.92756 | ATCAGCAAAAAGAAA CCGAGCA TCA TGGTCGG CGATATCAACGGGTA Paes_1974 2162974 - 2166807 + | magnesium chelatase, H subunit Paes_1975 2166857 - 2167558 + | magnesium protoporphyrin O-methyltransferase Paes_1976 2167706 - 2169346 + | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 2535 2169397 - 2169363 - T 100 -20.3 -3.48593 | opp_overlap 2169365 2169372, overlap 2169372 CAGCGTCGGACATAA CACAAAAAACCCTCC TGATC GGAGGGTTTTTTGTG TGTACACAGAGCAAC TERM 2536 2169365 - 2169395 + T 100 -17.1 -2.87132 | opp_overlap 2169363 2169372, overlap 2169372 GCGTCGGACATAACA CAAAAAACCCTCC TGATC GGAGGGTTTTTTG TGTGTACACAGAGCA TERM 2537 2169388 - 2169372 - T 100 -9.4 -5.53436 | opp_overlap 2169365 2169372, overlap 2169363 ACATAACACAAAAAA CCCTCC TGATC GGAGGG TTTTTTGTGTGTACA TERM 2538 2169372 - 2169388 + T 100 -9.4 -5.4251 | opp_overlap 2169372 2169363, overlap 2169365 ACATAACACAAAAAA CCCTCC TGATC GGAGGG TTTTTTGTGTGTACA Paes_1977 2169842 - 2169423 - | heat shock protein Hsp20 Paes_1978 2170918 - 2170028 - | hypothetical protein Paes_1979 2172350 - 2171094 - | membrane protein TERM 2539 2172433 - 2172421 - H 100 -4.1 -5.93809 | CGCTGAGAAAAAAAA CAGAG GCG CTCTA TGCCTGAATGCGGAA TERM 2540 2172510 - 2172475 - H 78 -6.2 -4.7373 | gap 1, overlap 2172479 2172485 CGACTTCAGGAAAAA GAAG-CTCAAACCGAAA TAA TTCCGGCATGAGACCTC TTTTACGACTCATTT Paes_1980 2172684 - 2174066 + | Peptidase M23 TERM 2541 2174093 - 2174112 + T 100 -13.6 -5.07486 | opp_overlap 2174093 ACAAATAATTCAAAA GGCTCCTG GAAA CAGGAGCC TTTTTGTTAAAGATC TERM 2542 2174112 - 2174093 - T 100 -13.6 -4.40311 | opp_overlap 2174093 ACAAATAATTCAAAA GGCTCCTG GAAA CAGGAGCC TTTTTGTTAAAGATC Paes_1981 2174529 - 2174119 - | Class I peptide chain release factor Paes_1982 2176066 - 2175842 - | CRISPR-associated protein Cas1 Paes_1983 2177061 - 2176063 - | conserved hypothetical cytosolic protein Paes_1984 2179200 - 2178121 - | hypothetical protein TERM 2543 2178409 - 2178393 - G 71 -2.9 -4.83615 | TACCCGGTATAAAAA GTCTTGG GAT CCATAAC ACACGACTATTTGCA TERM 2544 2178627 - 2178610 - G 75 -5.6 -4.62002 | opp_overlap 2178609, overlap 2178603 2178600 AGTAACGAGAGAAAA TGGTTC CTCGTC GAACCA GTCGGTTACCACCTT TERM 2545 2179307 - 2179326 + r 100 -12.2 -5.5604 | opp_overlap 2179306 AGCCCTGAACGATAT GCGAATCC TAAG GGATTCGC TTTTTTATTGCTTCG Paes_1985 2180638 - 2179331 - | hypothetical protein TERM 2546 2179753 - 2179769 + g 80 -5.1 -4.89063 | opp_overlap 2179756, overlap 2179756 GATTCTCATCCCCAT GAATAGC TTT GCTATAC TTTGTTTTTCGATAG TERM 2547 2180214 - 2180224 + g 80 -5.4 -4.95758 | opp_overlap 2180214 TTTGGAGAAAGAGCA TCTC TTG GAGA TTTTTCTGCTATACT TERM 2548 2181731 - 2181721 - g 70 -4 -4.6526 | opp_overlap 2181721 ATAAAGCCCGAAAAA TTAG CCT CTAA AATTTTCATATCGAG Paes_1986 2180875 - 2181984 + | CRISPR-associated RAMP protein, Cmr1 family TERM 2549 2182569 - 2182582 + G 74 -3.1 -4.9725 | opp_overlap 2182548 2182545 2182544, overlap 2182541 2182540 ATGAAAAACTGCATG CTGGA CGCC TTCAG TTTTTCTCTACCCAT Paes_1987 2181989 - 2183068 + | protein of unknown function DUF324 TERM 2550 2184010 - 2183997 - g 86 -6.7 -4.88388 | opp_overlap 2183997 AGAAGCGTATAAAAA GGTAC GACA GTACC TTGAATTTGACCTGG Paes_1988 2183065 - 2186007 + | hypothetical protein Paes_1989 2186004 - 2187002 + | CRISPR-associated RAMP protein, Cmr4 family Paes_1990 2186999 - 2187412 + | hypothetical protein Paes_1991 2187409 - 2188272 + | hypothetical protein TERM 2551 2189896 - 2189875 - f 73 -6.5 -4.31813 | gap 1, overlap 2189872 2189877 AACACATCAAAAGAA CAGCCAGCGG TTC CCGCTTGC-G CAATGACACAGAGAA TERM 2552 2189895 - 2189877 - f 80 -10.2 -3.74088 | overlap 2189872 2189875 CACATCAAAAGAACA GCCAGCGG TTC CCGCTTGC GCAATGACACAGAGA TERM 2553 2189931 - 2189914 - f 73 -4.8 -4.65446 | gap 1, overlap 2189918 ATGACACAGAGAAAA CGCAGGC ACAAG GCC-GCG CCCCCTACAGCTGAA Paes_1992 2190460 - 2190900 + | protein of unknown function DUF937 TERM 2554 2190968 - 2190934 - T 74 -10.7 -2.61264 | gap 2, overlap 2190933 TTGTCCAGTCATAAG CTCCCCCCCGGGAGACC AGA GG-C-CCCGGGGAGCAG AGGGTATGGCAACGA Paes_1993 2191960 - 2191010 - | WD-40 repeat protein TERM 2555 2191354 - 2191379 + g 70 -3.9 -4.59773 | overlap 2191356 2191357 CGGTATGGGAGAGCG AGTCGCCGGTT GCAT AACTGGCGGTG TTTTTGCCGCTGGCA TERM 2556 2191356 - 2191377 + g 74 -8.7 -3.91506 | overlap 2191354 2191357 GTATGGGAGAGCGAG TCGCCGGTT GCAT AACTGGCGG TGTTTTTGCCGCTGG Paes_1994 2193241 - 2192090 - | glycosyl transferase family 2 TERM 2557 2193271 - 2193254 - R 100 -12.7 -4.24745 | CATCAGCAATACAAA GCCGCTC AGAA GAGCGGC GGTCCGGCAAACGAC TERM 2558 2193323 - 2193298 - R 77 -7.5 -4.41548 | opp_overlap 2193298 CGACATTGCACAAAA GGCCACCCG AAATGAAG CGGTTGGCC TTTCTGCGTCATGAA TERM 2559 2193298 - 2193323 + r 70 -7.5 -3.93695 | opp_overlap 2193298 CGACATTGCACAAAA GGCCACCCG AAATGAAG CGGTTGGCC TTTCTGCGTCATGAA Paes_1995 2194227 - 2193343 - | ATP phosphoribosyltransferase Paes_1996 2194983 - 2194246 - | metallophosphoesterase TERM 2560 2194340 - 2194359 + g 100 -9.2 -6.06723 | AGATTGATATAGTGG CTGCGCGC GTTG GCGAGCAG TTTTTTTTTCAGCGC TERM 2561 2195251 - 2195230 - R 79 -3.7 -5.24129 | TTTTCTCACAAAAAA CCCGGTA TTTCATTT TACCGAG TTTCATGCCGAAAAT TERM 2562 2195469 - 2195451 - R 83 -3.8 -5.42259 | overlap 2195452 2195453 TCAGCGGCAAAAAAA CCCTTCTG CAC CAGAAGCA GCGTCCATACAACAA Paes_1998 2196800 - 2195799 - | bacteriochlorophyll/chlorophyll synthetase TERM 2563 2196498 - 2196485 - G 71 -2.4 -4.98255 | GCGCAAGCACAAAAA CAAC GATACT GTTG ATCAGTGCCTCTTTT TERM 2564 2196714 - 2196663 - G 72 -8.6 -3.79138 | gap 1 AAGATAGTCATGAAA GGTTCCCTGCATTGCC-CCGGAAGC CAT GACGCCGCCGGCAAGGCAGGGAAAC ACGCTGATCCAGGTT Paes_1999 2198254 - 2196929 - | RNA modification enzyme, MiaB family TERM 2565 2197793 - 2197776 - G 77 -2.7 -5.04175 | gap 1 GGAACCACACAAAAA GCGC-ACA TGT TGTTGCAC CCCCGCATCACAGGA TERM 2566 2197834 - 2197814 - G 78 -7.5 -4.30177 | opp_overlap 2197814, overlap 2197815 CATCACAGGAATAAA CGCGCTGAT CGA ACCAGAGCG CATTGGTTCGATATC TERM 2567 2198576 - 2198619 + r 100 -31.4 -2.8806 | opp_overlap 2198576 2198578 2198580 2198584, overlap 2198578 2198580 2198584 GAGTGTCGTGATACA GACAGAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTCTGTC TGTATCCGAAGGTTT TERM 2568 2198619 - 2198576 - R 100 -31.4 -2.87344 | opp_overlap 2198576 2198578 2198580 2198584, overlap 2198578 2198580 2198584 GAGTGTCGTGATACA GACAGAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTCTGTC TGTATCCGAAGGTTT TERM 2569 2198578 - 2198617 + r 100 -28.2 -2.98942 | opp_overlap 2198576 2198578 2198580 2198584, overlap 2198576 2198580 2198584 GTGTCGTGATACAGA CAGAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTCTG TCTGTATCCGAAGGT TERM 2570 2198617 - 2198578 - R 100 -28.2 -2.98823 | opp_overlap 2198578 2198576 2198580 2198584, overlap 2198576 2198580 2198584 GTGTCGTGATACAGA CAGAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTCTG TCTGTATCCGAAGGT TERM 2571 2198580 - 2198615 + r 100 -25 -3.05022 | opp_overlap 2198578 2198576 2198580 2198584, overlap 2198578 2198576 2198584 GTCGTGATACAGACA GAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTC TGTCTGTATCCGAAG TERM 2572 2198615 - 2198580 - R 100 -25 -3.05022 | opp_overlap 2198580 2198578 2198576 2198584, overlap 2198578 2198576 2198584 GTCGTGATACAGACA GAAAGAGCCGGCATAG CGTG CTATGCCGGCTCTTTC TGTCTGTATCCGAAG TERM 2573 2198584 - 2198611 + r 100 -20 -4.19483 | opp_overlap 2198580 2198578 2198576 2198584, overlap 2198580 2198578 2198576 TGATACAGACAGAAA GAGCCGGCATAG CGTG CTATGCCGGCTC TTTCTGTCTGTATCC TERM 2574 2198611 - 2198584 - R 100 -20 -4.19483 | opp_overlap 2198584 2198580 2198578 2198576, overlap 2198580 2198578 2198576 TGATACAGACAGAAA GAGCCGGCATAG CGTG CTATGCCGGCTC TTTCTGTCTGTATCC Paes_2001 2199273 - 2198662 - | nitrogen-fixing NifU domain protein Paes_2002 2200462 - 2199257 - | aminotransferase class V Paes_2003 2201441 - 2200515 - | cysteine synthase A TERM 2575 2201589 - 2201555 - R 74 -7.9 -4.1399 | opp_overlap 2201555 CTATGGATACACAAA TAGGGAAACCGGACA ATAAA TTCCCTGTTTCCCTA TTTTCAACAAAAAAA Paes_2004 2202590 - 2201697 - | transcriptional regulator, XRE family TERM 2576 2202199 - 2202187 - G 71 -2.6 -4.9645 | ATCACAAGAATAAAA GCGA TCCCT CCGC CGATAAGAACCTGAA TERM 2577 2202680 - 2202669 - R 74 -2.2 -5.26316 | TTAGTTTACAAAAAA CTCC CCAT GAAG ACAATCGAATTCAAC Paes_2005 2204793 - 2202712 - | hypothetical protein TERM 2578 2203654 - 2203670 + g 76 -7.9 -4.20084 | opp_overlap 2203654 ATCGTGGAGAACCCA CCCGCGA ATC TCCCGGG TTTTCAGTGCCTCAT Paes_2006 2204809 - 2204991 + | hypothetical protein Paes_2007 2204969 - 2205139 + | hypothetical protein Paes_2008 2205183 - 2206526 + | protein of unknown function DUF21 Paes_2009 2206661 - 2207086 + | Nucleoside-diphosphate kinase TERM 2579 2207110 - 2207136 + T 100 -8 -5.58179 | opp_overlap 2207114, overlap 2207114 CCGACAGTATCTATG AAAACCCCGG CAGTTGA CCGGGGTTTA TTTTTTCTTCTACTG TERM 2580 2207114 - 2207132 + T 95 -8.8 -5.22768 | opp_overlap 2207114, overlap 2207110 CAGTATCTATGAAAA CCCCGG CAGTTGA CCGGGG TTTATTTTTTCTTCT TERM 2581 2207132 - 2207114 - T 84 -9.5 -4.28994 | opp_overlap 2207114 2207110 CAGTATCTATGAAAA CCCCGGC AGTTG ACCGGGG TTTATTTTTTCTTCT Paes_2010 2208099 - 2207146 - | Serine-type D-Ala-D-Ala carboxypeptidase Paes_2011 2208727 - 2208170 - | hypothetical protein TERM 2582 2208370 - 2208348 - G 100 -4.7 -5.61824 | overlap 2208349 2208351 GAAAATGCAAAAAAA TCAGACCGG TCAAT CCGGTCGGC AACGCCGTAAAAGCG TERM 2583 2208369 - 2208349 - G 74 -8.2 -3.94654 | overlap 2208348 2208351 AAAATGCAAAAAAAT CAGACCGG TCAAT CCGGTCGG CAACGCCGTAAAAGC TERM 2584 2208367 - 2208351 - G 71 -9.4 -3.52477 | overlap 2208349 2208348 AATGCAAAAAAATCA GACCGG TCAAT CCGGTC GGCAACGCCGTAAAA TERM 2585 2208562 - 2208544 - G 75 -6.7 -4.34402 | overlap 2208545 TGCCTGACATCAAAA CGCTCTC GGAAA GAGAGCA CACAGCACTGAAGGC Paes_2012 2209942 - 2208851 - | protein of unknown function UPF0118 TERM 2586 2209481 - 2209466 - G 85 -3.2 -5.42458 | AACAAAAAAAAGAAA GAGCGT ATGC ACGGTC GACAGTGTGAACGAC TERM 2587 2209810 - 2209799 - G 86 -5.8 -5.04385 | CAGACGCTCAAAAAA CCTG TTGA CAGG CAACGCAAGACTTGA TERM 2588 2209841 - 2209829 - G 70 -6.3 -4.1964 | CGCAAGACTTGAAAA GATTG CAG CAATC AGAATAACCATGAGA Paes_2013 2210704 - 2209967 - | protein of unknown function DUF558 Paes_2014 2211409 - 2210717 - | phosphoribosyltransferase Paes_2015 2212412 - 2211420 - | ROK family protein Paes_2016 2213228 - 2212422 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 2589 2212718 - 2212684 - G 82 -7.8 -4.46212 | CCTGCCATCACAAAA GGAGGGACATCGAGAG AGG CTCTTGAAATGCCTCC GACCATGGCATAACG Paes_2017 2215871 - 2213229 - | hypothetical protein TERM 2590 2213541 - 2213552 + g 77 -5.8 -4.69028 | CTGCTCAAGGACGCT GAGC GCAA GCTC TTTTCTCTGTATTGT TERM 2591 2214512 - 2214500 - G 72 -6.9 -4.26076 | GGACTTCCATCAAAA GACGC TCT GCGCC GATACCGATCCAGAG Paes_2018 2217023 - 2215899 - | oxygen-independent coproporphyrinogen III oxidase TERM 2592 2216965 - 2216932 - G 88 -2.3 -5.52986 | overlap 2216933 2216934 AGCGCACGAAAAAAA GGTTCCTGAAATCCC TCGC GGGTTATCAGGAAAA AGTCACAGTAGCTGC Paes_2019 2217639 - 2217043 - | histidinol-phosphate phosphatase family protein Paes_2020 2219119 - 2217644 - | glycogen/starch synthase, ADP-glucose type TERM 2593 2218875 - 2218893 + g 73 -3.8 -4.78848 | overlap 2218876 GGCAGAGCCGTGACC TTGACATG GAG CAGGTCAG TTTTCTCTTTAGAGC Paes_2021 2219245 - 2220387 + | hypothetical protein Paes_2022 2220454 - 2221026 + | bacteriochlorophyll 4-vinyl reductase TERM 2594 2221351 - 2221334 - g 75 -5.5 -4.66318 | opp_overlap 2221337, overlap 2221337 ACGACTGCAAGAAAA GAGCTGC AGGA GCAGTTC AGTCCGGTGCTGTAT TERM 2595 2221463 - 2221441 - g 88 -12 -3.8211 | CTCCAGGGACAACAA GCCGATCATC GTG GATGCTCGGC TGGAAAGCACGGCCA Paes_2023 2221283 - 2221807 + | hypothetical protein Paes_2024 2222351 - 2221860 - | TIR protein Paes_2025 2222635 - 2222348 - | putative mitomycin resistance protein Paes_2026 2223399 - 2222713 - | haloacid dehalogenase, type II TERM 2596 2223532 - 2223515 - R 100 -9.1 -5.61596 | opp_overlap 2223515 AGCTCCATAAAAAAA GGCAGCC CGAA AGCTGCC TTGTACTACCTGTGT TERM 2597 2223515 - 2223532 + r 71 -8.4 -3.4376 | opp_overlap 2223515 AGCTCCATAAAAAAA GGCAGC CCGAAA GCTGCC TTGTACTACCTGTGT Paes_2027 2224414 - 2223587 - | light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein TERM 2598 2223720 - 2223741 + g 70 -7.3 -4.07568 | TCATCCTTTTCAGGG CCATCTTCC ATCT GGAACATGG TTTTACCGGCAAAAC TERM 2599 2224236 - 2224224 - G 76 -7.7 -4.25104 | overlap 2224228 TCTTCGTGATGAAAA TCGAC CTC GTCGA GAGCCTCGATAACAG Paes_2028 2226062 - 2224461 - | light-independent protochlorophyllide reductase, B subunit Paes_2029 2227361 - 2226099 - | light-independent protochlorophyllide reductase, N subunit Paes_2030 2227790 - 2227482 - | protein of unknown function DUF77 Paes_2031 2229114 - 2227807 - | Adenylosuccinate synthase Paes_2032 2229705 - 2229127 - | small GTP-binding protein TERM 2600 2230578 - 2230567 - g 85 -7.2 -4.83169 | opp_overlap 2230566, overlap 2230554 ACGCGTTCAGAAAAA CGCC ATCC GGCG GATTTCGCGCTCTGG TERM 2601 2231159 - 2231146 - g 70 -6.7 -4.09685 | overlap 2231156 TTTGATCTTGCAAAA GCAGT GAAC ACTGC CATTGCAGCCCCTTC Paes_2033 2230009 - 2231454 + | cysteinyl-tRNA synthetase Paes_2034 2232579 - 2231461 - | Mannose-1-phosphate guanylyltransferase (GDP) TERM 2602 2232179 - 2232191 + g 77 -3.3 -5.09173 | AGCGCAAGCTGCACC CCTTC TCT GATGG TTTTTTCAAATGTTG TERM 2603 2232251 - 2232265 + g 76 -4.2 -5.00616 | ACGACCAGGGTAACG GCGTCA GGA TCACGC TTTTTTACAAAGGCC TERM 2604 2233328 - 2233313 - g 86 -6.8 -4.9792 | TAGCGCACAGAAAAA CAACGG CTTG CCGTCG GATGTTGTTCAGCAT Paes_2035 2232738 - 2233403 + | methyltransferase GidB TERM 2605 2233430 - 2233380 - T 74 -3.6 -5.06414 | gap 2, overlap 2233382 TGTTTTGAAGAAAAA TATATAGTCATTGCC--TACAGGT AATCG ACCCGTCCTGACAATGACTATACA CTGATAAACCAATAA TERM 2606 2233472 - 2233447 - T 100 -16.3 -4.42976 | TGATAAACCAATAAA GCACCGGATAA AAAG TTATCCGGTGC AATACAATATGATGT Paes_2036 2233945 - 2233487 - | ribosomal protein L17 Paes_2037 2234979 - 2233993 - | DNA-directed RNA polymerase, alpha subunit Paes_2038 2235620 - 2235009 - | ribosomal protein S4 Paes_2039 2236046 - 2235663 - | ribosomal protein S11 Paes_2040 2236471 - 2236094 - | ribosomal protein S13 Paes_2041 2236625 - 2236509 - | ribosomal protein L36 TERM 2607 2236587 - 2236599 + g 80 -5.5 -4.90266 | TTTGATAATCCGGCA GTGCT CGC AGCGC TTTTTAATTGATGAA Paes_2042 2236947 - 2236729 - | translation initiation factor IF-1 Paes_2043 2237764 - 2236973 - | methionine aminopeptidase, type I Paes_2044 2239109 - 2237784 - | preprotein translocase, SecY subunit TERM 2608 2238323 - 2238346 + g 70 -6.7 -4.07568 | opp_overlap 2238323 TGACACGCATAGGAA TGTACTGCG TCGATC CGCCGTACA TTTTGCGACCGACAA TERM 2609 2239067 - 2239029 - G 70 -5.2 -4.42464 | overlap 2239032 2239034 AAGTCTGTAAATAAA CAAGAGCAGCAGCGTATA GAG TATCCGCTGCCGCAATTC CGGGATTTTATTGAT TERM 2610 2239064 - 2239032 - G 75 -6.9 -4.32678 | overlap 2239029 2239034 TCTGTAAATAAACAA GAGCAGCAGCGTATA GAG TATCCGCTGCCGCAA TTCCGGGATTTTATT TERM 2611 2239062 - 2239034 - G 100 -13.9 -3.75911 | overlap 2239032 2239029 TGTAAATAAACAAGA GCAGCAGCGTATA GAG TATCCGCTGCCGC AATTCCGGGATTTTA Paes_2045 2239682 - 2239128 - | ribosomal protein L15 Paes_2046 2239901 - 2239713 - | ribosomal protein L30 Paes_2047 2240437 - 2239919 - | ribosomal protein S5 TERM 2612 2240200 - 2240216 + g 70 -3.7 -4.66953 | TACCTTTGACAATCG GAACCTT GAC AACGTTC TTTTTGCCGTCTTCA Paes_2048 2240820 - 2240461 - | ribosomal protein L18 Paes_2049 2241412 - 2240870 - | ribosomal protein L6 Paes_2050 2241837 - 2241442 - | ribosomal protein S8 TERM 2613 2241749 - 2241769 + g 77 -6.1 -4.64763 | overlap 2241752 TTCTCTTTCTGTGTG GAATACGGG ATG TCCGTAGTC TTGTTTTTTGCCTGG Paes_2051 2242170 - 2241901 - | ribosomal protein S14 Paes_2052 2242778 - 2242188 - | ribosomal protein L5 Paes_2053 2243082 - 2242840 - | ribosomal protein L24 TERM 2614 2243019 - 2243038 + g 88 -2.1 -5.4833 | CTTTGTCGTTTCCTG CGATAAC AACAAC GGTATCG TTTTTTCTTACATGC Paes_2054 2243570 - 2243202 - | ribosomal protein L14 Paes_2055 2243910 - 2243611 - | ribosomal protein S17 Paes_2056 2244161 - 2243955 - | ribosomal protein L29 Paes_2057 2244607 - 2244188 - | ribosomal protein L16 Paes_2058 2245420 - 2244665 - | ribosomal protein S3 Paes_2059 2245795 - 2245439 - | ribosomal protein L22 Paes_2060 2246121 - 2245825 - | ribosomal protein S19 Paes_2061 2246996 - 2246157 - | ribosomal protein L2 Paes_2062 2247339 - 2247010 - | Ribosomal protein L25/L23 Paes_2063 2247998 - 2247372 - | ribosomal protein L4/L1e Paes_2064 2248647 - 2248018 - | ribosomal protein L3 TERM 2615 2248420 - 2248437 + g 73 -9.1 -3.62096 | TTCAGCAATCTTGTA GCCGGGA GTGA TTCCGGC TTTAGCATAATGCCC Paes_2065 2248982 - 2248671 - | ribosomal protein S10 TERM 2616 2249043 - 2249018 - R 100 -10.4 -5.18726 | GTTTTACAATAAAAA TGGGGCGGAA CGATAT CCCCGCCCCA TCACGAACATCATTT Paes_2066 2250245 - 2249064 - | translation elongation factor Tu TERM 2617 2249620 - 2249597 - G 70 -3.8 -4.64844 | overlap 2249590 CGGAGATAGAGAAAA CGTCCTCGAT AGGC ATCAGGAACG GCTTGTCAACGTCGC Paes_2067 2252432 - 2250318 - | translation elongation factor G TERM 2618 2251446 - 2251431 - G 75 -5.4 -4.61633 | ATAGACCCTGAAAAA TGTCAG CTTG CCGACA AACGGGTCGGTTGCA TERM 2619 2252156 - 2252184 + g 91 -5.3 -5.42514 | opp_overlap 2252147, overlap 2252157 2252160 TAAAATCGACGTGAC CCGGCGTATCAAT AAT ATTGATACGATGA TTTTTTCCTTTATAG TERM 2620 2252157 - 2252183 + g 72 -8.8 -3.83882 | opp_overlap 2252147, overlap 2252156 2252160 AAAATCGACGTGACC CGGCGTATCAAT AAT ATTGATACGATG ATTTTTTCCTTTATA TERM 2621 2252160 - 2252180 + g 73 -11.3 -2.66808 | opp_overlap 2252147, overlap 2252157 2252156 ATCGACGTGACCCGG CGTATCAAT AAT ATTGATACG ATGATTTTTTCCTTT Paes_2068 2252928 - 2252461 - | ribosomal protein S7 Paes_2069 2253341 - 2252955 - | ribosomal protein S12 Paes_2070 2253572 - 2253396 - | hypothetical protein Paes_2071 2255088 - 2253697 - | hypothetical protein Paes_2072 2257475 - 2255121 - | hypothetical protein TERM 2622 2255364 - 2255348 - G 80 -5.1 -5.00616 | overlap 2255363 CCTGCGGGTAAAAAA CCTCGCT TAC AACAAGG AGTGCATCTCCTTCC TERM 2623 2255853 - 2255840 - G 70 -3.7 -4.72272 | opp_overlap 2255840, overlap 2255841 GGTTCTCACCAAAAA GCCCG CCAG CGGGA TAAATTCTGAAGATG TERM 2624 2256641 - 2256631 - G 87 -4.6 -5.2696 | overlap 2256622 CCAAAACCGAAAAAA CCGG GAA CCAG AAAGGTCAGCAGTTC Paes_2073 2258962 - 2257484 - | polysaccharide biosynthesis protein TERM 2625 2257672 - 2257637 - G 79 -4 -5.03747 | gap 1, overlap 2257648 AAAGCCTGCAAAAAA GGGACGAAGAACAATGA GAG CCATTGC-CGTCACCCC TGAAGCTGCAAAGGG TERM 2626 2258195 - 2258176 - G 86 -9.2 -4.30448 | opp_overlap 2258174, overlap 2258177 AAACGGAACGCAAAA GGCCGGCA GTTC TGACGGCC GGCTGATAGATTCCG TERM 2627 2258198 - 2258177 - G 77 -11.5 -3.17184 | opp_overlap 2258174, overlap 2258176 AACGGAACGCAAAAG GCCGGCAGT TCTG ACGGCCGGC TGATAGATTCCGACT TERM 2628 2258677 - 2258650 - G 82 -9.2 -4.23156 | overlap 2258647 ACATCGAAGAAAGAA TCCCTGCTGC AGACGCGA GCAGCAAGGA GGCAACAAACGAAAA TERM 2629 2258716 - 2258693 - G 72 -4.6 -4.67942 | gap 1, overlap 2258695 GGCAACAAACGAAAA TC-GCATCGAG TAG CTCAACGCTGA AAGTGCCGCTCTTCG Paes_2074 2259819 - 2258959 - | glycosyl transferase family 2 TERM 2630 2259102 - 2259085 - G 72 -6.9 -4.20516 | opp_overlap 2259087 2259090, overlap 2259087 TCTGTATTGAACAAA CAGGCGC AAAA GCGCCTT ATGCTTTCTCCACTG TERM 2631 2259087 - 2259100 + g 73 -9.5 -3.64915 | opp_overlap 2259085 2259087, overlap 2259090 TGTATTGAACAAACA GGCGC AAAA GCGCC TTATGCTTTCTCCAC TERM 2632 2259100 - 2259087 - G 73 -9.5 -3.70307 | opp_overlap 2259087 2259090, overlap 2259085 TGTATTGAACAAACA GGCGC AAAA GCGCC TTATGCTTTCTCCAC TERM 2633 2259225 - 2259195 - G 81 -10.4 -3.95183 | GCACATAGAGAATAA CCTTTCCTGAGCGC CTC GCTCTCAGGGAAAG ATCGACATCCTCTCC Paes_2075 2260961 - 2259816 - | glycosyl transferase group 1 TERM 2634 2260364 - 2260349 - G 85 -3.2 -5.45726 | overlap 2260356 CATAGCCGAAAAAAA GGAGAA CCGG CCCTCC ACCGCCAAGCCCGAT Paes_2076 2261251 - 2260985 - | Phosphotransferase system, phosphocarrier protein HPr TERM 2635 2261173 - 2261157 - G 100 -3 -5.61596 | gap 1, opp_overlap 2261158 2261158, overlap 2261158 2261159 ATCTCGATAAAAAAA TCG-GCT TTGA AGCGCGA AGCCAGTTTCACCAC Paes_2077 2261792 - 2261307 - | GCN5-related N-acetyltransferase Paes_2078 2262781 - 2261798 - | GTP-binding protein Obg/CgtA TERM 2636 2262533 - 2262547 + g 80 -5.6 -5.0133 | GATTACAATATCCTT GCCTGT CTT ACCGGC TTTTTTCGAACCCTG Paes_2079 2262842 - 2263126 + | Exonuclease VII small subunit Paes_2080 2264568 - 2263123 - | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 2637 2264485 - 2264441 - G 82 -11.6 -3.53091 | gap 1, opp_overlap 2264451, overlap 2264445 2264451 AGGGCCCCCGGTAAA GCCAGACAAACCGGACAAACA TTGG TGTTTG-CCGGTTTGCCGAAC TCGGTCGAACAGCCG TERM 2638 2264481 - 2264445 - G 95 -15.4 -2.64155 | gap 1, opp_overlap 2264451, overlap 2264441 2264451 CCCCCGGTAAAGCCA GACAAACCGGACAAACA TTGG TGTTTG-CCGGTTTGCC GAACTCGGTCGAACA TERM 2639 2264475 - 2264451 - G 81 -9.4 -4.11295 | gap 1, opp_overlap 2264451, overlap 2264445 2264441 GTAAAGCCAGACAAA CCGGACAAACA TTGG TGTTTG-CCGG TTTGCCGAACTCGGT TERM 2640 2264451 - 2264475 + g 71 -9.4 -3.54543 | gap 1, opp_overlap 2264451 2264445 2264441 GTAAAGCCAGACAAA CCGGACAAACA TTGG TGTTTG-CCGG TTTGCCGAACTCGGT Paes_2081 2265181 - 2264645 - | hypothetical protein TERM 2641 2264762 - 2264743 - G 77 -12.2 -2.79289 | opp_overlap 2264731, overlap 2264742 CACCATCGGAATAAT CGGTGTTG GTCG CAACACCG GAGGAAACAACGATA TERM 2642 2265223 - 2265211 - R 75 -4.9 -4.86731 | TGTTGTTAAATAAAA TCAAA CCA TTTGA ATGCCGCAAGGCAGG Paes_2082 2266598 - 2265279 - | AAA ATPase central domain protein TERM 2643 2265971 - 2265987 + g 70 -6.5 -4.15703 | TACCCACCCCCGGTT CCCCG ATCAGCA CGGGG TTGTTCTTTGTCCGG TERM 2644 2266044 - 2266061 + g 72 -5.5 -4.54727 | overlap 2266046 AACCTCTTCGTCGCG CCCGATC ACCG GATCGAG TTTTCCTTTCCGCGC Paes_2083 2266677 - 2268320 + | ferredoxin-dependent glutamate synthase Paes_2084 2268637 - 2268332 - | hypothetical protein Paes_2085 2269817 - 2268807 - | von Willebrand factor type A TERM 2645 2268960 - 2268946 - G 81 -10 -3.889 | opp_overlap 2268959 TCGAACGACATCAAA CGCTCT GCC AGAGCG CGGGCCGCCTGTTGA TERM 2646 2269078 - 2269128 + g 88 -11.1 -4.07568 | opp_overlap 2269080 2269118, overlap 2269079 CCCTGAGCATCGAGC AACGGTTCGGGTTCCTCCCCG ACGGTCGAC CGGACAGGAACCCGAACCGGG TTTTGGCCGCCAACG TERM 2647 2269079 - 2269127 + g 93 -14.6 -3.04398 | opp_overlap 2269080 2269118, overlap 2269078 CCTGAGCATCGAGCA ACGGTTCGGGTTCCTCCCCG ACGGTCGAC CGGACAGGAACCCGAACCGG GTTTTGGCCGCCAAC TERM 2648 2269126 - 2269080 - G 100 -21.7 -3.19463 | opp_overlap 2269079 2269078, overlap 2269118 CTGAGCATCGAGCAA CGGTTCGGGTTCCTCCCCGAC GGTCG ACCGGACAGGAACCCGAACCG GGTTTTGGCCGCCAA TERM 2649 2269174 - 2269155 - G 70 -7.2 -4.06562 | gap 1, overlap 2269157 AACGCCAATCACAAA CACGTTCGT TCC ACGAACG-G CAAGCTCTGCGGCAA TERM 2650 2269173 - 2269157 - G 81 -10.9 -3.6217 | overlap 2269155 CGCCAATCACAAACA CGTTCGT TCC ACGAACG GCAAGCTCTGCGGCA Paes_2086 2270802 - 2269819 - | von Willebrand factor type A TERM 2651 2269889 - 2269871 - G 72 -5.2 -4.4648 | overlap 2269873 AGTTCGAGCAGAAAA CAGCAGAG TGC CCCCGCTA ACATAAAGGGATAGA Paes_2087 2271739 - 2270813 - | hypothetical protein TERM 2652 2271170 - 2271138 - G 100 -15.8 -3.53811 | gap 1, opp_overlap 2271145, overlap 2271145 TGCAGTTCGTGCAAA GCCGAAACGT-GATC ATGA GATCGACGTTTCGGC AGAATAAATTTCTTC Paes_2088 2272613 - 2271723 - | protein of unknown function DUF58 Paes_2089 2273745 - 2272747 - | ATPase associated with various cellular activities AAA_3 TERM 2653 2272960 - 2272938 - G 80 -5.5 -4.93296 | opp_overlap 2272938 TCAGCAGCAGAAAAA CAGAGGCTC TTGGC GAGACTCCG TATTCAATCATCGGA Paes_2090 2273982 - 2273758 - | hypothetical protein Paes_2091 2274016 - 2275053 + | metalloendopeptidase, glycoprotease family TERM 2654 2275373 - 2275361 - g 75 -6.9 -4.33165 | GGAAACTGACCAAAA GCCCC GCT GGAGC ATGGCAGTGGAAGCC TERM 2655 2275656 - 2275681 + G 74 -3.1 -5.00616 | overlap 2275658 GCAGGACCCGGTACC GGCTGTCGACC ATGT GGGCGAGAGAC TTTTTTGGCACAAAA Paes_2092 2275312 - 2275704 + | Catalase Paes_2094 2276385 - 2276125 - | addiction module toxin, RelE/StbE family Paes_2095 2276617 - 2276369 - | CopG domain protein DNA-binding domain protein TERM 2656 2276818 - 2276852 + H 71 -4.9 -4.57569 | gap 1, opp_overlap 2276823, overlap 2276823 CTTCTTCCTTCACGA CAAAAGCCGCCACAGG ATTA CCGG-GGCGGCTTTGC TTTTTCAGGGAATCA TERM 2657 2276847 - 2276823 - H 93 -10.6 -4.46212 | opp_overlap 2276818 2276823 TCCTTCACGACAAAA GCCGCCACAG GATTA CCGGGGCGGC TTTGCTTTTTCAGGG TERM 2658 2276823 - 2276847 + H 85 -9.2 -4.32046 | gap 1, opp_overlap 2276823, overlap 2276818 TCCTTCACGACAAAA GCCGCCACAGG ATTA CCGG-GGCGGC TTTGCTTTTTCAGGG TERM 2659 2278499 - 2278480 - g 95 -12.2 -4.08692 | overlap 2278460 GAACTTCTGCCAAAA GAGGTCAG CTAT CTGACCTC ATACGACAAAGCCCA Paes_2096 2277160 - 2278599 + | filamentation induced by cAMP protein Fic Paes_2098 2279142 - 2280125 + | Integrase catalytic region Paes_2099 2280300 - 2280455 + | hypothetical protein Paes_2100 2281162 - 2280458 - | hypothetical protein Paes_2101 2283197 - 2281176 - | hypothetical protein TERM 2660 2282109 - 2282090 - G 73 -3.6 -4.8269 | GATAATTACGAAAAA CGTTAATA GAAA TATTATCG CTAAAATCAAAATCC Paes_2102 2284880 - 2283234 - | Radical SAM domain protein TERM 2661 2283893 - 2283919 + g 77 -6 -4.67755 | AAGCATGATCTTTGC TTATAATCAAGG TGC CATTGGTTATAA TTTTTACATAAATAT Paes_2103 2285648 - 2285205 - | Integrase catalytic region Paes_2104 2286993 - 2285752 - | RNA-directed DNA polymerase (Reverse transcriptase) Paes_2107 2288192 - 2287902 - | transposase IS3/IS911 family protein TERM 2662 2288033 - 2288057 + g 73 -9.3 -3.61356 | opp_overlap 2288032 2288030 2288033, overlap 2288054 CTTTTGAGAATACAT CGGGAGCTTTT TCC AGAAACTCCCG TTTCCACTGGGTAAT TERM 2663 2288137 - 2288152 + g 70 -5.4 -4.3208 | overlap 2288132 2288138 CGCTCGCTGAGGGCT TCAAGG ACGA CCTTGG TTTTGAATTCTGCAC Paes_2109 2288579 - 2290645 + | protein of unknown function DUF87 TERM 2664 2290800 - 2290786 - g 76 -4.2 -4.92777 | AATACTAAGGAAAAA GAGCTT CTA AGGCTC GCTAAACTAAGGCAG Paes_2110 2290759 - 2291403 + | Mrr restriction system protein-like protein Paes_2111 2291608 - 2292180 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Paes_2112 2292263 - 2292616 + | preprotein translocase, YajC subunit TERM 2665 2293402 - 2293378 - g 75 -5.6 -4.71776 | CAATACGCAACAAAA GCCTGTGCCG CTGTT CGGCATATGC CTGGGACATCAGCTC Paes_2113 2292626 - 2293741 + | carbamoyl-phosphate synthase, small subunit TERM 2666 2294163 - 2294137 - f 86 -10.8 -3.9243 | overlap 2294153 GAACTCCTGAAAGAA CATCCTGACGCC AAA GGCGTCTGCATG ACACACTCGGAAACA Paes_2115 2294986 - 2295642 + | hypothetical protein TERM 2667 2296302 - 2296287 - g 77 -8.2 -4.0098 | opp_overlap 2296290, overlap 2296290 CCTCAACGGAAACAA GCACCG GCGA CGGCGC GTCGCGGATATCGTC TERM 2668 2296624 - 2296614 - g 74 -3.2 -4.90906 | TCAGAACATCAAAAA CATC CGT GACG CAGGCATCAGTCTCT Paes_2116 2295649 - 2297076 + | Radical SAM domain protein TERM 2669 2297506 - 2297488 - g 81 -11 -3.58162 | overlap 2297484 TCATCAGCAAATCAA TCACCGGC TAC ACCGGTGA AAAATTCATGATGCC Paes_2117 2297181 - 2297606 + | cytochrome c class I TERM 2670 2297628 - 2297661 + F 100 -13.9 -5.00616 | opp_overlap 2297633 TCTGAGCTCCTCGCA TCGAACGGCAGCC CATACAAC GGCCGCCGTTCGA TTTTTTAAACACCCC Paes_2118 2297804 - 2298175 + | cytochrome c class I TERM 2671 2298239 - 2298212 - f 100 -14.1 -4.68724 | opp_overlap 2298212 GTATTGAACAGAAAA GGCCGGACACC AAAAAA GGTGACCGGCC TTTCTCATTACTGCC TERM 2672 2298212 - 2298239 + F 100 -14.1 -4.08144 | opp_overlap 2298212 GTATTGAACAGAAAA GGCCGGACACC AAAAAA GGTGACCGGCC TTTCTCATTACTGCC TERM 2673 2298547 - 2298577 + G 70 -6.8 -4.0827 | CGGCGACATCAGTCT GACCTGGGCGATCA CCA TGATTGCAGGGGTC TTTCTGTGGCTCTGT Paes_2119 2298437 - 2298691 + | hypothetical protein TERM 2674 2299435 - 2299425 - g 77 -3.2 -5.055 | TTAACGGCGAAAAAA CTCC GGA AGAG CTTATCAGGGAGGTC Paes_2120 2298770 - 2299570 + | pyrroline-5-carboxylate reductase TERM 2675 2300598 - 2300586 - g 74 -7.7 -4.07885 | CAGGGCGCTGCAAAA GGAGT CAC ACTCC CCCGCTGCCTCCTTC Paes_2121 2299588 - 2300898 + | hypothetical protein Paes_2122 2301253 - 2300861 - | molybdopterin biosynthesis MoaE protein Paes_2123 2301513 - 2301256 - | thiamineS protein Paes_2124 2302732 - 2301506 - | molybdenum cofactor synthesis domain protein TERM 2676 2302007 - 2302027 + g 80 -11.9 -3.39844 | opp_overlap 2302005, overlap 2302006 CATGAGAAGATCACT CTTGGCGAG CGC TTCGCCAAG TATTTCAGCTATAGC Paes_2125 2303673 - 2302729 - | molybdenum cofactor biosynthesis protein C Paes_2126 2304815 - 2303805 - | molybdenum cofactor biosynthesis protein A Paes_2127 2305719 - 2304862 - | glycerophosphoryl diester phosphodiesterase TERM 2677 2305603 - 2305572 - G 81 -10.3 -3.94634 | opp_overlap 2305556, overlap 2305573 GATCATGGGAAACAA CGATCCTGTGATC GGAAGA GATCACAAGATCA AGTTCAATGGCGGTG TERM 2678 2305602 - 2305573 - G 75 -11.6 -2.96298 | opp_overlap 2305556, overlap 2305572 ATCATGGGAAACAAC GATCCTGTGATC GGAAGA GATCACAAGATC AAGTTCAATGGCGGT TERM 2679 2305743 - 2305727 - R 100 -13.7 -5.71712 | CTGTACATAAAAAAA GGGGCTC TGT GAGCCCC TGCGATCACGCATGT Paes_2128 2306283 - 2305768 - | hypothetical protein Paes_2129 2306725 - 2306405 - | hypothetical protein Paes_2130 2306967 - 2307155 + | Ric1 protein TERM 2680 2307785 - 2307796 + G 70 -3.6 -4.59773 | ATCGATACCGCACCT TCGG CCTC CCGG TTTTTCACCGTGACA Paes_2131 2307301 - 2308488 + | molybdopterin-guanine dinucleotide biosynthesis protein B Paes_2132 2308466 - 2308981 + | UspA domain protein Paes_2133 2310295 - 2309066 - | NADH:ubiquinone oxidoreductase, subunit F Paes_2134 2310937 - 2310311 - | NADH:ubiquinone oxidoreductase, subunit E Paes_2135 2311568 - 2310939 - | NADH:ubiquinone oxidoreductase, subunit D TERM 2681 2311014 - 2311002 - G 71 -3.3 -4.81083 | GCCAAGCACGAAAAA TGCTC CGG GGGCA AGCAGCATAAGACCG TERM 2682 2311439 - 2311427 - G 82 -3.3 -5.22006 | CGACCAGAACAAAAA TCAGC GCA GCAGA CATCACCAGAGCGGT Paes_2136 2312219 - 2311584 - | NADH:ubiquinone oxidoreductase, subunit C Paes_2137 2313360 - 2312206 - | NADH:ubiquinone oxidoreductase, subunit B Paes_2138 2314710 - 2313364 - | NADH:ubiquinone oxidoreductase, subunit A TERM 2683 2314278 - 2314266 - G 90 -6.9 -5.1356 | overlap 2314267 TTGCAGGAACAAAAA CCGCC TTG GGCGA GACATCAGGATCGGC TERM 2684 2315791 - 2315777 - g 85 -3.4 -5.43414 | overlap 2315779 ATCAGAGAGAAAAAA GGCGGC AAG ACCTCC TACCGTAAAGCCTCC TERM 2685 2316776 - 2316764 - g 74 -3.3 -5.00884 | ATGGGCCGGAAAAAA GCGCT TGA AGCCC TTAACAATATCGACT Paes_2139 2315435 - 2317654 + | molybdopterin oxidoreductase TERM 2686 2318028 - 2318012 - g 72 -8.7 -3.85698 | opp_overlap 2318012 GGCTTTGTTGATAAA TGCTCGC TCT GCAAGCA TCGTCTTGACCAGGG Paes_2140 2317658 - 2318224 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Paes_2141 2318227 - 2319219 + | Polysulphide reductase NrfD TERM 2687 2319303 - 2319249 - f 100 -8.7 -6.11243 | opp_overlap 2319259 2319267, overlap 2319250 2319254 2319259 2319267 AGCGAACAAAAAAAA CGCAACCAC-ACGCAACAAGGCAGTCC CCG GGGCTGCCTTGTTGCGTTATGAA-ACA ATGCGGCAATATCGC TERM 2688 2319302 - 2319250 - f 85 -10 -4.24306 | opp_overlap 2319259 2319267, overlap 2319249 2319254 2319259 2319267 GCGAACAAAAAAAAC GCAACCAC-ACGCAACAAGGCAGTCC CCG GGGCTGCCTTGTTGCGTTATGAA-AC AATGCGGCAATATCG TERM 2689 2319299 - 2319254 - f 100 -18.5 -3.64523 | gap 1, opp_overlap 2319259 2319267, overlap 2319250 2319249 2319259 2319267 ACAAAAAAAACGCAA CCAC-ACGCAACAAGGCAGTCC CCG GGGCTGCCTTGTTGCGTTATGA AACAATGCGGCAATA TERM 2690 2319259 - 2319293 + F 100 -25.2 -3.29511 | opp_overlap 2319254 2319250 2319249 2319259 2319267, overlap 2319267 AAAAACGCAACCACA CGCAACAAGGCAGTCC CCG GGGCTGCCTTGTTGCG TTATGAAACAATGCG TERM 2691 2319293 - 2319259 - f 100 -23 -2.97122 | opp_overlap 2319259 2319267, overlap 2319254 2319250 2319249 2319267 AAAAACGCAACCACA CGCAACAAGGCAGTCC CCG GGGCTGCCTTGTTGCG TTATGAAACAATGCG TERM 2692 2319285 - 2319267 - f 80 -10.2 -3.71888 | opp_overlap 2319267 2319259, overlap 2319259 2319254 2319250 2319249 AACCACACGCAACAA GGCAGTCC CCG GGGCTGCC TTGTTGCGTTATGAA TERM 2693 2319267 - 2319285 + F 100 -12.4 -3.75766 | opp_overlap 2319259 2319254 2319250 2319249 2319267, overlap 2319259 AACCACACGCAACAA GGCAGTCC CCG GGGCTGCC TTGTTGCGTTATGAA TERM 2694 2319670 - 2319658 - g 74 -2.6 -5.1615 | GCAACATTCAAAAAA GCCG GTTAT CGAC TCTCTCTTCTTGACA Paes_2142 2319580 - 2320266 + | short-chain dehydrogenase/reductase SDR TERM 2695 2320385 - 2320355 - T 77 -9.9 -3.6106 | opp_overlap 2320356 2320362, overlap 2320362 CTGAACACCTTCAAA CAAAAAAGCTCAG GATAA CTGAGCTTTTTCA TTCTCCACCTGCGGG TERM 2696 2320378 - 2320362 - T 100 -8 -5.63517 | opp_overlap 2320356 2320362, overlap 2320355 CCTTCAAACAAAAAA GCTCAG GATAA CTGAGC TTTTTCATTCTCCAC TERM 2697 2320362 - 2320378 + T 87 -8 -4.93365 | opp_overlap 2320362 2320355, overlap 2320356 CCTTCAAACAAAAAA GCTCAG GATAA CTGAGC TTTTTCATTCTCCAC TERM 2698 2321488 - 2321462 - T 85 -8 -4.62783 | CAGCCACGTCAAAAA CCGCTTGACATC GTT GGTATCAAGCAG TGCAGGTAGGAACGT Paes_2144 2321697 - 2321455 - | hypothetical protein TERM 2699 2321985 - 2322017 + G 74 -2.5 -5.093 | overlap 2321986 2322014 CGTCGGCATCTCCGT TCTCGCCGCAACACC CTG GGTGATGCTTGGAGG TTTTCTTCTTTTGGC Paes_2145 2321857 - 2322387 + | hypothetical protein TERM 2700 2322554 - 2322508 - g 77 -10.2 -3.65351 | gap 1, overlap 2322509 2322517 TGAGGCCGATCTAAA GGTGATCAAGCCGAAGGAGCC TGCAAC GGCTTCTTCGGCT-GCTCACG TGCAATCAGGTATTC TERM 2701 2322553 - 2322509 - g 85 -13.7 -2.78996 | gap 1, overlap 2322508 2322517 GAGGCCGATCTAAAG GTGATCAAGCCGAAGGAGCC TGCAAC GGCTTCTTCGGCT-GCTCAC GTGCAATCAGGTATT TERM 2702 2322546 - 2322517 - g 89 -13.6 -3.2048 | overlap 2322509 2322508 TCTAAAGGTGATCAA GCCGAAGGAGCC TGCAAC GGCTTCTTCGGC TGCTCACGTGCAATC Paes_2146 2322485 - 2323582 + | hypothetical protein TERM 2703 2323882 - 2323892 + G 85 -8.2 -4.5123 | ACATTGCAGGAGACG CGGC TGC GCCG TTTCTTTCCTCGCTT Paes_2147 2323575 - 2324066 + | putative threonine efflux protein TERM 2704 2325640 - 2325652 + G 72 -6.2 -4.35483 | CCTCGAAAACGATCT GCCG CATCC CGGC TTTGTTGTGCTGGAC Paes_2148 2324063 - 2325889 + | hypothetical protein Paes_2150 2326995 - 2326810 - | hypothetical protein Paes_2149 2325978 - 2326868 + | hypothetical protein Paes_2151 2328418 - 2327135 - | transposase IS116/IS110/IS902 family protein TERM 2705 2328057 - 2328071 + g 70 -5.7 -4.40561 | TTATCCCAACGCCCA TCGAG CAGTT CTCGA TTCTTTTTGACCGCA Paes_2152 2328603 - 2328698 + | hypothetical protein TERM 2706 2328856 - 2328844 - f 70 -6.3 -4.26076 | TTATCTGCATTAAAA TCTGT AGT ACAGA TAATAAATAATGTTG TERM 2707 2328900 - 2328864 - f 85 -9.3 -4.43576 | overlap 2328867 2328868 AGTACAGATAATAAA TAATGTTGCAGGCGCGC TGC GCACGCCTGCAACGGCC GAGTTGAGCGGAAAT TERM 2708 2328897 - 2328867 - f 100 -17.6 -4.31697 | overlap 2328864 2328868 ACAGATAATAAATAA TGTTGCAGGCGCGC TGC GCACGCCTGCAACG GCCGAGTTGAGCGGA TERM 2709 2328896 - 2328868 - f 100 -21.1 -3.17391 | overlap 2328867 2328864 CAGATAATAAATAAT GTTGCAGGCGCGC TGC GCACGCCTGCAAC GGCCGAGTTGAGCGG Paes_2153 2328998 - 2329693 + | glutamine amidotransferase class-I Paes_2154 2329880 - 2329722 - | hypothetical protein Paes_2155 2330576 - 2329956 - | SOUL heme-binding protein Paes_2156 2331409 - 2330741 - | hypothetical protein TERM 2710 2330932 - 2330922 - G 70 -6.8 -4.0896 | opp_overlap 2330923, overlap 2330923 AAATCCTTTGGAAAA TCCC TGG GGGA GGTCTTCAGGGTTTC Paes_2157 2332621 - 2331494 - | hypothetical protein TERM 2711 2331720 - 2331700 - G 72 -9.7 -3.28712 | CCCTGGCCTTGAGAA GCATACGCT CGA AGCGTCTGC CTGCCTGGATCAACG TERM 2712 2333025 - 2333006 - R 100 -13.6 -3.61267 | AATCGGAAACGATAA GGGCGAAC ACTT GTTCGCCC CAGTAAAATCCGCTA Paes_2159 2333686 - 2333081 - | cytochrome B561 TERM 2713 2333355 - 2333366 + g 79 -3.6 -5.06414 | TGCAGGGGATTGAGG CGGG AAAT CTCG TTTTTCTTGAACGGG Paes_2160 2335290 - 2333683 - | cytochrome c family protein TERM 2714 2334838 - 2334852 + g 79 -2 -5.28176 | overlap 2334840 GTAGGCAGGATGGCC TGCCCC GCT GGGATA TTTTTTATAGGTCCC TERM 2715 2335494 - 2335468 - R 100 -22.4 -5.1675 | opp_overlap 2335468 CCAGGCATTAAAAAA CCCGTACCGGCA TGG TGCCGGTACGGG TATATCTTGACAGGA TERM 2716 2335468 - 2335494 + r 100 -22.4 -3.09273 | opp_overlap 2335468 CCAGGCATTAAAAAA CCCGTACCGGCA TGG TGCCGGTACGGG TATATCTTGACAGGA TERM 2717 2335609 - 2335587 - R 75 -4.8 -4.81212 | overlap 2335588 TTCAGCACAACAAAA CGCCAGACCT GAT AGATCTTGCA CTTCATCTTGAACCG Paes_2161 2337122 - 2335689 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2718 2337322 - 2337312 - H 87 -5.4 -5.43866 | CAATCTTCAAAAAAA GTTC TTA GAAC CACTGTGACGAAAGA Paes_2162 2337327 - 2337755 + | Holliday junction resolvase YqgF TERM 2719 2338140 - 2338124 - g 70 -5.9 -4.17048 | TTGGCGTTAAAACAA TTTTCGC CGA ACGAAAA GATGGCGCCATGAGT Paes_2163 2337865 - 2338446 + | orotate phosphoribosyltransferase Paes_2164 2338455 - 2339321 + | Prephenate dehydrogenase Paes_2165 2339318 - 2340175 + | ATP-NAD/AcoX kinase Paes_2166 2340182 - 2341660 + | hypothetical protein TERM 2720 2341794 - 2341807 + G 79 -2.3 -5.1861 | opp_overlap 2341795, overlap 2341795 ACGCACAAACCATAT ACTGC AACT GCAGC TTTTTTGCTCATCGC TERM 2721 2342295 - 2342285 - g 100 -4.6 -5.7946 | CTGCGAAGAAAAAAA CGGC AAC ACCG AAGCGGCCATGGCTG TERM 2722 2342420 - 2342400 - g 70 -6.1 -4.20367 | CTTGGCAACAAAGAA GCAGCAACC CTG GATTACCGC AAAGCGGCCGAACTG Paes_2167 2341773 - 2342492 + | Tetratricopeptide TPR_2 repeat protein TERM 2723 2342535 - 2342493 - T 72 -9.4 -3.14344 | opp_overlap 2342499 2342503, overlap 2342495 2342503 GAGCGTGCTGATTAA TATTGATGAAGTTGACGT ACGGATG AAGTCAACTTCATCAATT GCAACGGAACTCAAA TERM 2724 2342533 - 2342495 - T 83 -12 -3.13403 | opp_overlap 2342499 2342503, overlap 2342493 2342503 GCGTGCTGATTAATA TTGATGAAGTTGACGT ACGGATG AAGTCAACTTCATCAA TTGCAACGGAACTCA Paes_2168 2343115 - 2342546 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family TERM 2725 2342747 - 2342725 - G 78 -10.6 -3.46509 | overlap 2342719 2342728 TTTCAAGAATAGGAA TATCGCCTAC ATC GTCGGCGATA TAGGCACACTCGTCA Paes_2169 2343966 - 2343136 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2726 2343409 - 2343384 - G 81 -11.2 -3.58726 | TCGCGTCATAGACAA CAGGATAGCC CGCTCT GGCCATCCTG GCAATACCCCTGAAA Paes_2170 2344077 - 2345399 + | ATPase AAA-2 domain protein TERM 2727 2345388 - 2345410 + F 89 -14.9 -2.52464 | ATTGCACTTGTTATC GCAGGCTCC TGAAC GGAGCCTGC TGCATTAACCGAACA Paes_2171 2345442 - 2345711 + | hypothetical protein Paes_2172 2345733 - 2346860 + | Beta-N-acetylhexosaminidase TERM 2728 2347284 - 2347266 - g 70 -3.8 -4.62069 | overlap 2347268 GCGGTATCGTAAAAA TCCTCATG CCA CACGAGCA CTGGAATGAAACCAT Paes_2173 2346857 - 2347348 + | putative phosphohistidine phosphatase, SixA Paes_2174 2348463 - 2347465 - | Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Paes_2175 2349189 - 2348482 - | protein of unknown function DUF205 TERM 2729 2348801 - 2348775 - G 93 -8.7 -4.91109 | TCGTCAGCAGAAAAA CAGCCAGCACG ATGAG CGTACTGACCG GCGCGATACCGAACA Paes_2176 2350209 - 2349220 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 2730 2350101 - 2350087 - G 77 -2.7 -5.03715 | overlap 2350076 2350088 ATCAGGCTGAAAAAA GCCGC CGAAC GCGCC GATATCGGTCATCAC Paes_2177 2351655 - 2350240 - | aspartate kinase Paes_2178 2351739 - 2352320 + | NLP/P60 protein TERM 2731 2353164 - 2353147 - g 88 -5.5 -5.24129 | TCCTGCGATAAAAAA CCGGACG CCGA CATCCAG AATACTCATTTCAGG Paes_2179 2352425 - 2353297 + | ribosomal L11 methyltransferase TERM 2732 2353468 - 2353443 - g 74 -3.3 -5.0133 | overlap 2353444 2353461 CAGGCTTGGAAAAAA TGTCGATGA ACAGAAAA TCATCGACC ACGAAGCCATGCAAC Paes_2180 2353315 - 2354268 + | Ppx/GppA phosphatase Paes_2181 2354976 - 2354305 - | major paralogous domain protein Paes_2182 2356414 - 2355209 - | hypothetical protein TERM 2733 2356814 - 2356794 - g 91 -9 -4.72007 | overlap 2356810 GTCTATGAAAACAAA GCCGGTCA GCGGA TAACCGGC CAGATGCACGGAGGC Paes_2183 2356563 - 2357078 + | Jacalin-related lectin TERM 2734 2357140 - 2357110 - T 100 -14.1 -5.47399 | overlap 2357099 2357111 CCAACCGGAAAAAAA CGCTATTGCCGGC AAAAA ACCGGCAATAGCA TCAACCCGATGTCAA TERM 2735 2357139 - 2357111 - T 100 -15.4 -3.87355 | overlap 2357099 2357110 CAACCGGAAAAAAAC GCTATTGCCGGC AAAAA ACCGGCAATAGC ATCAACCCGATGTCA Paes_2184 2357842 - 2357141 - | phosphoribulokinase/uridine kinase Paes_2185 2359283 - 2357997 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 2736 2358686 - 2358656 - G 70 -11.1 -2.8294 | opp_overlap 2358656 2358677, overlap 2358653 CAGGCTCGATAATCA CCGCGGCAACAGC CTCAT GATGCTGCCGCAG CTTTTGGTGAAGGTC TERM 2737 2358677 - 2358687 + g 72 -6.8 -4.26344 | opp_overlap 2358656 2358653, overlap 2358656 CAACAGCCTCATGAT GCTG CCG CAGC TTTTGGTGAAGGTCT TERM 2738 2358778 - 2358761 - G 77 -6.3 -4.72986 | gap 1, overlap 2358737 2358763 GAGCTTCAGCAAAAA GC-TGCTC AGC GAGCATGC CAGTGAAGAGGGAGT Paes_2186 2360018 - 2359335 - | dethiobiotin synthase Paes_2187 2360878 - 2360072 - | biotin biosynthesis protein BioC Paes_2188 2361552 - 2360866 - | protein of unknown function DUF452 TERM 2739 2361519 - 2361505 - G 70 -3.5 -4.7078 | opp_overlap 2361505 CCAACCATTGAAAAA CACCA GAACA CGGTG GTTGTTTCGCTGTTC Paes_2189 2362724 - 2361558 - | 8-amino-7-oxononanoate synthase Paes_2190 2363737 - 2362724 - | Biotin synthase TERM 2740 2363457 - 2363416 - G 100 -16.8 -2.87132 | CCCCCTTGGCATAGA CCCTGCCTG-CCGCCTCGAA GACC TTCGAG-CGGTCAAGCAGGG AATACGATTCAACAT Paes_2191 2364737 - 2363754 - | biotin/acetyl-CoA-carboxylase ligase Paes_2192 2365127 - 2364969 - | hypothetical protein TERM 2741 2365606 - 2365617 + G 76 -3.6 -4.91511 | TTTCGGGTCTTGCTG CTGC CTAC GCGG TTTTTCTCATAAGCT TERM 2742 2366112 - 2366123 + G 77 -5.8 -4.72986 | AAACTGACGCTTGAT GTCC AGGA GGAC TTTTTCATACGGGTC TERM 2743 2367076 - 2367059 - g 70 -5.5 -4.43351 | overlap 2367060 ACACCTGAAAAACAA CGGTCAC CCCT GTGACCT CATCCTGATGGATTT Paes_2193 2365182 - 2367332 + | integral membrane sensor hybrid histidine kinase TERM 2744 2367321 - 2367310 - f 72 -5.8 -4.56883 | opp_overlap 2367309 2367306 TCAACACGAAACAAA CGCT ACAA AGCG AATGTCTTTAGATTC Paes_2194 2367361 - 2368233 + | Methyltransferase type 12 TERM 2745 2368277 - 2368296 + F 77 -9.2 -3.76224 | overlap 2368278 CAATGCAGAGTTTGA AGCCAGGC TGAT GCCTGGCA TTTCATGGATGAGCG TERM 2746 2368278 - 2368295 + F 82 -12.7 -2.8552 | overlap 2368277 AATGCAGAGTTTGAA GCCAGGC TGAT GCCTGGC ATTTCATGGATGAGC Paes_2195 2368708 - 2369382 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2747 2369397 - 2369433 + F 71 -8 -3.74975 | gap 1 AACTGAAAAAGCTCG TCCCTGTC-ATACGGCC ATTG GGCTGGAACGACAGGGA TTGTATATTATCTGA Paes_2196 2369500 - 2369994 + | Ferritin Dps family protein TERM 2748 2370391 - 2370364 - g 74 -3.4 -5.01535 | gap 1, overlap 2370366 2370389 GTAGAAGCAGAAAAA GT-CCATGCGGCA CTC TACCGCAAAGCAC TCGAAGCGGCAAAAA Paes_2197 2370034 - 2370534 + | Rubrerythrin TERM 2749 2370544 - 2370598 + T 100 -19.8 -2.82516 | gap 1, opp_overlap 2370562, overlap 2370562 GCCTAAGGTTAGCCC TGCGATATCAACAAAAAAGCCCTCA CCAAAA TGAGGGCTTTTTTGTTGATA-CACA TATGCTCATCACACC TERM 2750 2370562 - 2370581 + T 100 -9.3 -5.5112 | opp_overlap 2370562, overlap 2370544 GATATCAACAAAAAA GCCCTCA CCAAAA TGAGGGC TTTTTTGTTGATACA TERM 2751 2370581 - 2370562 - T 100 -10 -5.5353 | opp_overlap 2370562 2370544 GATATCAACAAAAAA GCCCTCAC CAAA ATGAGGGC TTTTTTGTTGATACA Paes_2198 2371116 - 2370607 - | ferric uptake regulator, Fur family TERM 2752 2371854 - 2371840 - g 70 -5.7 -4.40561 | TGCGGTCAAAAAGAA TCGAG AACTG CTCGA TGGGCGTTGGGATAA Paes_2199 2371493 - 2372776 + | transposase IS116/IS110/IS902 family protein Paes_2200 2374349 - 2373075 - | DNA-directed DNA polymerase TERM 2753 2373580 - 2373619 + g 72 -4.3 -4.63218 | gap 2, overlap 2373580 2373582 CGCAGATCCTCTTTC G-ATCT-CACCGTCCGCCC GAAC GAGCGGGAGGTGCAGATGC TTTTCTTCACCGGCC TERM 2754 2374076 - 2374042 - G 70 -4.9 -4.45083 | overlap 2374044 2374045 CTGAGATCGAGAAAA GATTCGTCGATCGAA TACAC CTCGATCGACGGCGC AAAACCTGCCAGCGT Paes_2201 2374820 - 2374368 - | peptidase S24 and S26 domain protein Paes_2202 2375568 - 2374939 - | hypothetical protein Paes_2203 2377030 - 2375705 - | type I secretion outer membrane protein, TolC family TERM 2755 2376276 - 2376291 + g 74 -2.5 -5.08824 | gap 1 ATCCCCTCTTCAGCG GCACCG ATCTC CGG-GC TTTTTTCCATAGCAA Paes_2204 2378213 - 2377035 - | secretion protein HlyD family protein TERM 2756 2377761 - 2377727 - G 72 -4.9 -4.72272 | gap 1 GTCGGGCAGTAAAAA GCT-CCCGCTGCGTTG CCAT CATCTCAGCGGCCAGC GCGGTATCGGGCGAA TERM 2757 2378231 - 2378244 + r 79 -5.2 -5.16841 | TCTGGTTTTCTCTGC CGGC TTTGAT GCCG TTTTTCTTGCTATCA Paes_2205 2379940 - 2378210 - | type I secretion system ATPase TERM 2758 2378635 - 2378654 + g 72 -6.4 -4.3739 | overlap 2378637 CCCGGTCTGCATCGA GATCGCCA AACC TGGCGATA TTTTCTGCAAAAGTA TERM 2759 2378637 - 2378652 + g 76 -9 -3.79419 | overlap 2378635 CGGTCTGCATCGAGA TCGCCA AACC TGGCGA TATTTTCTGCAAAAG Paes_2206 2381685 - 2379937 - | type I secretion system ATPase TERM 2760 2380695 - 2380724 + g 70 -10.7 -2.70354 | overlap 2380692 2380710 TAACTCCTTCAACGC TGAGCCTGCCTTC AGGA GAAGGCAGGGCCA TCCCTTTCTCCGGCA TERM 2761 2381625 - 2381603 - G 85 -3.4 -5.42862 | overlap 2381616 ATATTGGTAAAAAAA CTGATCAGAA AAA CCCTGATGAG ATAGGGAAAGATCTG TERM 2762 2381631 - 2381616 - G 71 -2.6 -4.92783 | gap 1, overlap 2381603 AACTGATCAGAAAAA CCCTGAT GAG AT-AGGG AAAGATCTGCGAAAA TERM 2763 2381739 - 2381716 - R 85 -11.8 -3.41569 | opp_overlap 2381722, overlap 2381714 2381718 2381722 TCATTCATTGAAAGA CATGAAGGGC AACT GCCCTTCATA AGAAAAGACTGCCAC TERM 2764 2381737 - 2381718 - R 85 -12.2 -3.27676 | opp_overlap 2381722, overlap 2381716 2381714 2381722 ATTCATTGAAAGACA TGAAGGGC AACT GCCCTTCA TAAGAAAAGACTGCC TERM 2765 2381773 - 2381746 - R 95 -10.6 -4.77165 | opp_overlap 2381744 2381746 CCCTTCATAAGAAAA GACTGCCACCCC GAAA AGGATGACAGTC TGTTACTGTTACGCC Paes_2207 2386559 - 2381796 - | Alkaline phosphatase TERM 2766 2382806 - 2382826 + g 75 -11.9 -3.02511 | AGCTGTTGGAGTGAT CGCTGGTCA CAA TGATCAGCG TGTTCGACCAGTCCA TERM 2767 2383712 - 2383697 - G 85 -3.2 -5.40464 | opp_overlap 2383705, overlap 2383705 GAGTAGAAACAAAAA GCGG ATAAGGCG CCGC ACCGCCTTTGGACGG TERM 2768 2384234 - 2384254 + g 80 -11.9 -3.35597 | overlap 2384232 AGCTGTTGGAGTGAT CGCTGGTCA CAA TGATCAGCG TGTTTGACCAGTCGA TERM 2769 2386563 - 2386574 + H 71 -2.2 -5.07971 | GCTATCCGGCATGAT TGAG GGCC CTCG TTTTTGATTATTTTG Paes_2208 2386745 - 2386879 + | hypothetical protein Paes_2209 2387998 - 2386931 - | hypothetical protein Paes_2210 2388738 - 2388016 - | hypothetical protein TERM 2770 2388847 - 2388837 - R 78 -5.4 -4.9934 | overlap 2388840 ACAACACGACAAAAA GAAC GTT GTTC CTGCAGGTCGTGACA Paes_2211 2390579 - 2388888 - | N-acetylmuramoyl-L-alanine amidase TERM 2771 2389193 - 2389183 - G 77 -8.2 -4.14243 | GACTGCAGGGTAAAA GCGC TTT GCGC AAGGCTGCTGAGAAT TERM 2772 2392450 - 2392423 - g 76 -4 -4.98531 | opp_overlap 2392424 2392426, overlap 2392424 TGCTGAAACGAAAAA TCATTCCTACCG AACT CGGTCGGGATGT ATCATTGATCCTGGT TERM 2773 2392796 - 2392776 - g 85 -6.7 -4.74084 | AAACCAAAACCAAAA GGCACCGGC ATC GCCTGTCCC GGATGCGAAGACGGA TERM 2774 2392829 - 2392844 + G 76 -7.5 -4.21974 | CATGGTGCTGCGCGA CGGGC GCTTCG GCCCG TTTCTTGCGTGCTCC Paes_2212 2390853 - 2393249 + | DNA topoisomerase I Paes_2213 2395380 - 2393239 - | ferrous iron transport protein B TERM 2775 2393335 - 2393325 - G 75 -4.6 -4.81212 | CGGAGTAGAACAAAA CCGG TTT CCAG CGTCCGATCTCTTTC TERM 2776 2393807 - 2393817 + g 74 -2.4 -5.05782 | opp_overlap 2393806 ACAGCAAAAAGAATG ACCG TTC CGGC TTTTTTCACATACAT TERM 2777 2394500 - 2394489 - G 100 -5.8 -6.02919 | CCACAAAGAAAAAAA TCGG CAGA CCGA GTACCCGGTTCAGCA Paes_2214 2395667 - 2395377 - | FeoA family protein Paes_2215 2398515 - 2395795 - | aconitate hydratase 1 Paes_2216 2398927 - 2398547 - | histidine triad (HIT) protein TERM 2778 2398678 - 2398663 - G 70 -6.8 -4.07568 | overlap 2398664 GCCCGGTGTTGAAAA CCAGGC GATA GCCTGA TTCAGCAATACCGAC TERM 2779 2399218 - 2399208 - H 80 -5.4 -5.06414 | CCGCTTTAATAAAAA GACT TAC AGTC CACTCGCTCTCCTTC Paes_2217 2399304 - 2399942 + | hypothetical protein TERM 2780 2399994 - 2399960 - T 100 -23.1 -4.67943 | opp_overlap 2399964 2399968 GCTGAATATATAAAA TGCAGAAAGCCTCCC GATCA GGGAGGCTTTCTGCA TTCAGAGATATGCTA TERM 2781 2399964 - 2399990 + T 100 -16.7 -2.53015 | opp_overlap 2399960, overlap 2399968 AATATATAAAATGCA GAAAGCCTCCC GATCA GGGAGGCTTTC TGCATTCAGAGATAT TERM 2782 2399968 - 2399986 + T 93 -11.7 -3.97368 | opp_overlap 2399960, overlap 2399964 TATAAAATGCAGAAA GCCTCCC GATCA GGGAGGC TTTCTGCATTCAGAG Paes_2218 2400655 - 2399996 - | cyclase family protein TERM 2783 2400084 - 2400066 - G 70 -5.2 -4.323 | overlap 2400067 GGCAAACAGGTAAAA CGGAAGGA GCG TCCTGCCA GTGACGAAAGAGACA Paes_2219 2401643 - 2400657 - | dihydroorotate dehydrogenase TERM 2784 2401549 - 2401520 - G 71 -10.7 -2.83822 | overlap 2401517 GCGATTTCAGAACCA CAGCACCCGCTCC TGCA GAAGCAAGCGCTG TAACCTTTTCTACGG TERM 2785 2401718 - 2401689 - R 100 -8 -5.91981 | overlap 2401693 AAAATTGAAAAAAAA TGAACG-CCGGATG CTTC CATCCGGACG-TCA TAGAGAGAAAATACG TERM 2786 2401715 - 2401693 - R 81 -9.9 -4.1299 | gap 1, overlap 2401689 TTGAAAAAAAATGAA CG-CCGGATG CTTC CATCCGGACG TCATAGAGAGAAAAT Paes_2220 2403054 - 2401792 - | hypothetical protein TERM 2787 2402013 - 2401994 - G 100 -10.8 -4.84761 | AGATCGCCATAAAAA GTATCGAG CATG CTCGATAC CCGTTCAGGCGGAAT TERM 2788 2402141 - 2402154 + g 79 -3.8 -5.14563 | TCTGCTTTTGCGTCA GCCT CCTGCA AGGC TTTTTTCATCCGAAG Paes_2221 2403546 - 2403070 - | hypothetical protein Paes_2222 2404186 - 2403650 - | hypothetical protein Paes_2223 2404729 - 2404208 - | hypothetical protein Paes_2224 2405162 - 2404857 - | hypothetical protein TERM 2789 2405256 - 2405240 - R 100 -2.9 -6.38655 | overlap 2405241 2405242 AAACACAAAAAAAAA GCCCTTC AGG GAAGGAG AAACTTCACTCCTTG TERM 2790 2405255 - 2405241 - R 73 -6.4 -4.37703 | overlap 2405240 2405242 AACACAAAAAAAAAG CCCTTC AGG GAAGGA GAAACTTCACTCCTT Paes_2225 2406707 - 2405262 - | Alkaline phosphatase Paes_2226 2407445 - 2406855 - | hypothetical protein TERM 2791 2407114 - 2407102 - G 71 -3.3 -4.77986 | overlap 2407103 CCAAAGAGCGAAAAA TCGTG AGA CACGG GATAGAAATAGCGAA TERM 2792 2407560 - 2407531 - R 87 -5 -5.32699 | opp_overlap 2407531, overlap 2407521 TTAAACAGGAAAAAA TCGCTGGC-TGTCG GCGC CGTCATGCC-GCGA TCTTCCGCCTGATAT Paes_2227 2408296 - 2407550 - | alpha/beta hydrolase fold TERM 2793 2408527 - 2408515 - g 91 -3.3 -5.53991 | GAGTCATGAAAAAAA CAGCG TTC CTCTG CCTCGGCGCAGTCAT Paes_2228 2408505 - 2409089 + | rare lipoprotein A Paes_2229 2409100 - 2409420 + | Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding Paes_2230 2410107 - 2409436 - | transaldolase Paes_2231 2411842 - 2410517 - | hypothetical protein TERM 2794 2410808 - 2410786 - G 82 -12 -3.45768 | overlap 2410779 CAGCATAAGTGACAA CCGGCAGTAA ATC TTTCTGCCGG GGATCGCGGAGCTCT TERM 2795 2411838 - 2411826 - G 74 -6.3 -4.4891 | GGCATCAGCACAAAA CAAAG CGG CTTTG ACATTATCCCTCCTT TERM 2796 2411912 - 2411899 - R 75 -4.5 -4.90778 | CTTATGGAAAGAAAA TCAGG ATTG CCCGA TTCCAAGAAAAAGGC Paes_2232 2413302 - 2411899 - | hypothetical protein TERM 2797 2413261 - 2413242 - G 76 -4.2 -4.88067 | opp_overlap 2413243, overlap 2413243 ATCCATGTATAAAAA CCACAGCA GTAT CGCTGCGA TTGTTCCGGTGTTCG TERM 2798 2413359 - 2413344 - R 73 -4.6 -4.79451 | overlap 2413355 ATTTCAAAGACAAAA CCCCGT AGAG ACGTGG GTTCACAGGCAAATC Paes_2233 2414788 - 2413592 - | protein of unknown function DUF323 Paes_2234 2415040 - 2414897 - | hypothetical protein Paes_2235 2416429 - 2415371 - | deoxyhypusine synthase Paes_2236 2416790 - 2417812 + | tryptophanyl-tRNA synthetase Paes_2237 2417819 - 2418583 + | beta-phosphoglucomutase family hydrolase TERM 2799 2418736 - 2418723 - g 73 -3.7 -4.74132 | AGAGTGCAGGAAAAA CCCGC GTCA GCTGG CCGAAGAGATCAGCG TERM 2800 2419470 - 2419456 - g 72 -5 -4.72272 | CTTGGTCAGGAAAAA GATAAG GTG CTCATC AAATCAACAGGTGAA Paes_2238 2418568 - 2420223 + | arginyl-tRNA synthetase TERM 2801 2420259 - 2420243 - T 70 -9.4 -2.89564 | opp_overlap 2420238 GGGCGATCTGAGAGA GCGGGA AACAA TCCCGC TCGCCTCTTCAGGAG Paes_2239 2420879 - 2420268 - | nicotinate (nicotinamide) nucleotide adenylyltransferase Paes_2240 2421791 - 2420886 - | Tetratricopeptide TPR_2 repeat protein TERM 2802 2421931 - 2421895 - R 77 -9.5 -3.61398 | opp_overlap 2421885 GGTTTGGTGCAATAA GGATTGCCATTCCGT TCTTTCT AAGGAATGGCGATCC CCTGTAGCACATCTC Paes_2241 2422200 - 2421949 - | hypothetical protein TERM 2803 2422527 - 2422500 - R 100 -14.8 -5.43553 | opp_overlap 2422497 AGGGAAAAAAGAAAA CGCGCCGGCCTC AGGA AAGGACGGCGCG AAATCATCTACGAGA Paes_2242 2422995 - 2422549 - | hypothetical protein TERM 2804 2423092 - 2423064 - R 70 -6.8 -4.06892 | opp_overlap 2423077, overlap 2423074 ACAACGGGACAGAAA GGAAGAAAAAGA AGGGG TCTCCCTCTTCC TGCGAAGCAATATAA TERM 2805 2423091 - 2423074 - R 87 -6.3 -5.25906 | gap 1, opp_overlap 2423077, overlap 2423064 AGAAAGGAAGAAAAA GAAG-GGG TCT CCCTCTTC CTGCGAAGCAATATA TERM 2806 2423673 - 2423697 + r 100 -6.5 -5.72254 | gap 1, opp_overlap 2423673 GCGACAATAAAAAAA GCCTGTCTGA TAATGC TCAG-CAGGC TTTTTTATTATTTCA TERM 2807 2423697 - 2423673 - R 100 -6.5 -5.88565 | gap 1, opp_overlap 2423673 GCGACAATAAAAAAA GCCTGTCTGA TAATGC TCAG-CAGGC TTTTTTATTATTTCA Paes_2244 2424274 - 2423732 - | ATP synthase F1, delta subunit Paes_2245 2424815 - 2424288 - | ATP synthase F0, B subunit TERM 2808 2424882 - 2424848 - R 93 -10.7 -4.50627 | opp_overlap 2424849 2424850, overlap 2424849 2424850 TATCGATTAAATAAA GCCCGGTTGCAGAAC TCGCC GTTCGGCAACCGGAT TCTTAGATATAGATG TERM 2809 2424849 - 2424881 + r 89 -12 -3.7104 | opp_overlap 2424848 2424849 2424850, overlap 2424850 ATCGATTAAATAAAG CCCGGTTGCAGAAC TCGCC GTTCGGCAACCGGA TTCTTAGATATAGAT TERM 2810 2424881 - 2424849 - R 100 -14.2 -3.29653 | opp_overlap 2424849 2424850, overlap 2424848 2424850 ATCGATTAAATAAAG CCCGGTTGCAGAAC TCGCC GTTCGGCAACCGGA TTCTTAGATATAGAT TERM 2811 2424850 - 2424880 + r 93 -15.5 -2.82142 | opp_overlap 2424849 2424848 2424850, overlap 2424849 TCGATTAAATAAAGC CCGGTTGCAGAAC TCGCC GTTCGGCAACCGG ATTCTTAGATATAGA TERM 2812 2424880 - 2424850 - R 93 -15.5 -2.57069 | opp_overlap 2424850 2424849, overlap 2424849 2424848 TCGATTAAATAAAGC CCGGTTGCAGAAC TCGCC GTTCGGCAACCGG ATTCTTAGATATAGA Paes_2246 2425142 - 2424906 - | ATP synthase F0, C subunit Paes_2247 2426222 - 2425248 - | ATP synthase F0, A subunit Paes_2248 2426605 - 2426219 - | hypothetical protein Paes_2249 2426918 - 2426661 - | hypothetical protein Paes_2250 2428403 - 2427438 - | UDP-glucose 4-epimerase Paes_2251 2428562 - 2429323 + | protein of unknown function DUF152 Paes_2252 2429507 - 2429298 - | hypothetical protein TERM 2813 2429646 - 2429636 - H 81 -2.4 -5.52384 | opp_overlap 2429636 CGTTTATCAAAAAAA CCGG TTT CCGC TCTATAACCAATACC TERM 2814 2429753 - 2429716 - g 71 -2.5 -4.90778 | opp_overlap 2429735 GCTACTGAAACAAAA CCACCGGGCCAACGAAA TCGT CTTCAAAGGCCTTGTGG AATTCGGCTGTTTCA TERM 2815 2430474 - 2430464 - g 70 -5.4 -4.3898 | ATGATGTGTACAAAA GCAT TCA ATGC ACTCTCCCCCGGAGG Paes_2253 2429687 - 2430706 + | C-20 methyltransferase BchU TERM 2816 2430776 - 2430720 - T 100 -14.8 -4.08064 | gap 1, opp_overlap 2430739, overlap 2430725 2430739 AACCTCCCGGCAAAA CGATACAGCACAAAAAAAATGCTCCGG AGTT CCGGAGCATTTTTTTTGCGTCA-ATCA CTTAACAGCGCGCCT TERM 2817 2430772 - 2430725 - T 100 -18 -3.09823 | opp_overlap 2430739, overlap 2430720 2430739 CCCGGCAAAACGATA CAGCACAAAAAAAATGCTCCGG AGTT CCGGAGCATTTTTTTTGCGTCA ATCACTTAACAGCGC TERM 2818 2430739 - 2430758 + T 100 -13.6 -5.81412 | opp_overlap 2430725 2430720 2430739 ACAGCACAAAAAAAA TGCTCCGG AGTT CCGGAGCA TTTTTTTTGCGTCAA TERM 2819 2430758 - 2430739 - T 100 -13.6 -6.00086 | opp_overlap 2430739, overlap 2430725 2430720 ACAGCACAAAAAAAA TGCTCCGG AGTT CCGGAGCA TTTTTTTTGCGTCAA Paes_2254 2432064 - 2430778 - | acetyl-CoA hydrolase/transferase Paes_2255 2433911 - 2432157 - | succinate dehydrogenase, flavoprotein subunit Paes_2256 2434430 - 2433933 - | succinate dehydrogenase, membrane subunit, putative Paes_2257 2434887 - 2434453 - | succinate dehydrogenase, cytochrome b556 subunit Paes_2258 2436326 - 2435040 - | cell division protein FtsZ Paes_2259 2437667 - 2436372 - | cell division protein FtsA TERM 2820 2437301 - 2437317 + g 80 -5.1 -4.92828 | TAATCTCATGATCGA TATCCAG ATA CCGGATA TTTGTTTTTGCCTTT Paes_2260 2438583 - 2437723 - | Polypeptide-transport-associated domain protein FtsQ-type TERM 2821 2437897 - 2437907 + g 75 -5.4 -4.65916 | CGGTGACCCGGATGC CGTA AAA TACG TTTTATTCCCATCAA TERM 2822 2438023 - 2438039 + g 75 -4.4 -4.84359 | gap 1, overlap 2438023 2438024 CGGGTCGACTTTAAC G-GGAGC TTTC GCTCCGC TTTTTCTCACCCTCA TERM 2823 2438182 - 2438168 - G 70 -7.1 -4.08945 | ACGATCCGTGCAAAA GGACG CCGCT CGTCC ACCTGCACCCTGATG Paes_2261 2439515 - 2438583 - | UDP-N-acetylenolpyruvoylglucosamine reductase Paes_2262 2440920 - 2439526 - | UDP-N-acetylmuramate/alanine ligase TERM 2824 2439682 - 2439664 - G 74 -3 -5.00616 | CCCGTCTTCAAAAAA CGAGACGT TGG ATGCCCCG GCAACCCTTGCCGCC TERM 2825 2439887 - 2439903 + g 73 -9.4 -3.63627 | overlap 2439879 2439878 GGCCAACCGGCCTTT GCCGCT TTGAC AGCGGC TTTCACCTCTGAAGG Paes_2263 2442027 - 2440930 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 2826 2440989 - 2440977 - G 71 -10.5 -2.85503 | overlap 2440976 CTGCAAGATCCAAAG CGGCC TCC GGCCG TCCCTCCTTGCGGCA TERM 2827 2441636 - 2441620 - G 70 -6.5 -4.17132 | AAATGCTGCAAGAAA CCGGG TAGTCAC CCCGG GAAAAGCGTTCTGCT Paes_2264 2443229 - 2442024 - | cell cycle protein TERM 2828 2442589 - 2442566 - G 75 -4.6 -4.87626 | gap 1 GCGCAATAGCAAAAA TTCCTGCCGCC GGG AGCAG-AGGAA TCGCCGTCACCAGCA Paes_2265 2444635 - 2443226 - | UDP-N-acetylmuramoylalanine/D-glutamate ligase Paes_2266 2445741 - 2444635 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 2829 2444759 - 2444738 - G 77 -8.7 -4.13767 | CCTTTGAGCTGAAAA TGATGGTGC AGCG GCGCCATCA GGAAAATCCTGCGCC Paes_2267 2447178 - 2445772 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase TERM 2830 2446332 - 2446310 - G 77 -7 -4.57569 | overlap 2446311 TGACGTCCGGAAAAA TGAAGCATCA GGC TGACGCTTCC GGAAGCAGTGCAAAG TERM 2831 2446331 - 2446311 - G 76 -10.5 -3.3422 | overlap 2446310 GACGTCCGGAAAAAT GAAGCATCA GGC TGACGCTTC CGGAAGCAGTGCAAA Paes_2268 2448856 - 2447357 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 2832 2447871 - 2447848 - G 70 -6.6 -4.0098 | opp_overlap 2447851, overlap 2447850 2447851 CTTCAACCGAAACAA CATCGGCAAC AGAC GCTGCCGCCG TTTCAAGAGAGAGAC TERM 2833 2447871 - 2447851 - G 70 -11.1 -2.749 | opp_overlap 2447851, overlap 2447848 2447850 CAACCGAAACAACAT CGGCAACAG ACG CTGCCGCCG TTTCAAGAGAGAGAC Paes_2269 2450918 - 2448876 - | Peptidoglycan glycosyltransferase TERM 2834 2449299 - 2449287 - G 79 -2.6 -5.21709 | overlap 2449296 GTCTACAGGAAAAAA GCCG ACAAA CGAC GCGATATAGCTTCGG TERM 2835 2449631 - 2449648 + g 72 -4.8 -4.66318 | overlap 2449645 CGGAATATCCATAGC CCATCC ACGGCA GGGTGG TTTTATTCCACTGCT TERM 2836 2450571 - 2450555 - G 84 -7.9 -4.7254 | opp_overlap 2450554 2450552 2450555 ATCGCTGAGCAAAAA GCCTGGC CAC GTCAGGC GTCTTATCGACGGCA Paes_2270 2451413 - 2450940 - | hypothetical protein TERM 2837 2451345 - 2451319 - G 77 -8.6 -4.09739 | opp_overlap 2451322, overlap 2451322 TTAATTCGCTCAAAA GAAGGCTGCACC GCA GGCCCCGCCTTC ATAACGGCCGCTTTT Paes_2271 2452395 - 2451394 - | S-adenosyl-methyltransferase MraW TERM 2838 2452195 - 2452175 - G 72 -6 -4.41047 | opp_overlap 2452175 ACCCTTGAAGCAAAA GGCCGCAG TCTCC CGGCAGCC TCTTCGAGGGCGAAG TERM 2839 2452296 - 2452285 - G 72 -7.2 -4.21462 | ACTCATCACCGAAAA GGCG TGGC CGCC GCCGCCAAGGGTGCC Paes_2272 2452877 - 2452401 - | protein of unknown function UPF0040 TERM 2840 2452530 - 2452511 - G 72 -8.6 -3.78934 | TGGCGCCGACAATAA CGACATCA CGGC TGATGCCG GCATGCTGCAGAAAT Paes_2273 2453054 - 2453581 + | hypothetical protein Paes_2274 2453709 - 2454035 + | Chorismate mutase TERM 2841 2454203 - 2454187 - g 87 -4.4 -5.24531 | gap 1 ATTCTGCAGAAAAAA TCC-CGG TTCA CCGCGGA GCAAGCTTCCACTCG TERM 2842 2454333 - 2454312 - g 78 -9.3 -3.92324 | CTCCGCAATATCAAA CCAGGCCGC TATA GCGTCCCGG AAAAAATGTCAAACT TERM 2843 2454753 - 2454738 - g 90 -6.8 -5.1356 | opp_overlap 2454736 CTCGATGAAGAAAAA CCGCTG ATCG CAGCAG TCTACCTTAACCGCC Paes_2275 2454054 - 2455103 + | aminodeoxychorismate lyase Paes_2276 2455267 - 2456460 + | Phosphoglycerate kinase Paes_2277 2456559 - 2457410 + | Rhomboid family protein Paes_2278 2457444 - 2457899 + | protein of unknown function DUF1232 TERM 2844 2458050 - 2458023 - f 77 -11.5 -2.66963 | opp_overlap 2458021 2458027, overlap 2458022 2458020 GATCATGAACAATAG TGCTCATAAGT TTATGT ACTTATGAGCA TCCCTCTTTCTGACA Paes_2279 2458205 - 2458672 + | protein of unknown function Spy-related TERM 2845 2458682 - 2458720 + T 87 -14 -2.87564 | gap 1, opp_overlap 2458677 2458674 2458689, overlap 2458683 AACTGAATATGACTG CA-CGAGAGAGCTGAGC ATACCC GCACAGCTCTCTCGCTG TCTATACAGCCATGA TERM 2846 2458683 - 2458718 + T 86 -13.3 -2.98942 | opp_overlap 2458677 2458674 2458689, overlap 2458682 ACTGAATATGACTGC ACGAGAGAGCTGAGC ATACCC GCACAGCTCTCTCGC TGTCTATACAGCCAT Paes_2280 2460297 - 2459098 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 2847 2460253 - 2460243 - G 74 -8.2 -3.86346 | CCATCGCTCCAGAAA CGGG ATC CCCG GTGACAGAGTCGCGC Paes_2281 2461172 - 2460297 - | peptidase M24 Paes_2282 2462466 - 2461165 - | Tetratricopeptide TPR_2 repeat protein TERM 2848 2462131 - 2462118 - G 75 -6.7 -4.4078 | overlap 2462130 CCGTTTCAATGAAAA GCTTC CCGA GAAGC AGCCTGGACTGCCAA Paes_2283 2463902 - 2462481 - | Radical SAM domain protein TERM 2849 2462959 - 2462912 - G 100 -11.4 -4.79826 | gap 1, opp_overlap 2462912 2462911, overlap 2462905 2462913 AGACATGAGGAAAAA TCTTTACCGCTTGCGAGATCACG TCA CGCGCTCTGGCAA-CGGTAAAGC GTTTGTCAATTCGGG TERM 2850 2462958 - 2462913 - G 100 -14.9 -3.46811 | gap 1, opp_overlap 2462912 2462911, overlap 2462905 2462912 GACATGAGGAAAAAT CTTTACCGCTTGCGAGATCACG TCA CGCGCTCTGGCAA-CGGTAAAG CGTTTGTCAATTCGG Paes_2284 2465281 - 2463947 - | Radical SAM domain protein TERM 2851 2465249 - 2465197 - G 76 -8 -4.21194 | gap 1, opp_overlap 2465197 2465199 2465199, overlap 2465199 2465203 2465205 CGTCAGCATCGAAAA CATCAATAGAGGACGTAATCGTATT ATAC AATACGGTCACGTCCTC-ATGAATA TTGAATTTTTTCGTA TERM 2852 2465246 - 2465199 - G 73 -9.5 -3.70674 | gap 2, opp_overlap 2465199 2465199 2465197, overlap 2465197 2465203 2465205 TCAGCATCGAAAACA TCAATAGAGGACGTAATCGTATT ATAC AATACGGTCACGTCCTC-A-TGA ATATTGAATTTTTTC TERM 2853 2465243 - 2465203 - G 82 -11.4 -3.5485 | gap 1, opp_overlap 2465199 2465199 2465197, overlap 2465199 2465197 2465205 CATCGAAAACATCAA TAGAGGACGTAATCGTATT ATAC AATACGGTCACGTCCTC-A TGAATATTGAATTTT TERM 2854 2465242 - 2465205 - G 100 -16.5 -3.33884 | opp_overlap 2465199 2465199 2465197, overlap 2465203 2465199 2465197 TCGAAAACATCAATA GAGGACGTAATCGTATT ATAC AATACGGTCACGTCCTC ATGAATATTGAATTT Paes_2285 2465694 - 2465353 - | hypothetical protein TERM 2855 2465600 - 2465610 + g 70 -5.4 -4.3208 | opp_overlap 2465600, overlap 2465594 2465593 CCGAATTTTGCCAAA GTCT CGT AGAC TTTTGCCTTCTCAAC Paes_2286 2465971 - 2465753 - | hypothetical protein TERM 2856 2467129 - 2467101 - g 100 -3.9 -5.73563 | gap 1, overlap 2467102 AGCAAATCAAAAAAA CCGTGCCAACAG GCCAAT CT-CTGGCACGA CACGCTATCGCATCA Paes_2287 2466257 - 2467249 + | aldo/keto reductase Paes_2288 2467478 - 2468452 + | hypothetical protein Paes_2289 2468513 - 2468893 + | hypothetical protein Paes_2290 2469367 - 2469498 + | hypothetical protein TERM 2857 2469930 - 2469910 - g 82 -2.6 -5.40072 | gap 2, overlap 2469912 CTTTTCGGAAAAAAA GAGACGTGCA TGC TGC-CGTC-C GAAGAGCTACGCAAG TERM 2858 2469929 - 2469912 - g 72 -6.3 -4.34482 | gap 1, overlap 2469910 TTTCGGAAAAAAAGA GACGTGCA TGC TGC-CGTC CGAAGAGCTACGCAA Paes_2291 2469541 - 2469978 + | putative thiol-disulphide oxidoreductase DCC Paes_2293 2472225 - 2470168 - | TonB-dependent receptor TERM 2859 2470841 - 2470825 - G 70 -4.3 -4.58395 | opp_overlap 2470818 CGGATTGCCGAAAAA TCCCGGA TTG CCCTGGA TATATCGTTCACTCG TERM 2860 2471906 - 2471871 - G 95 -14 -3.55761 | gap 1, overlap 2471872 TATTGATGTGCGAAA GCGAAGGGTCCTTGCGG CTG CCGC-AGGCCCCTTCGA GAATCCCCCCGTCCA TERM 2861 2471905 - 2471872 - G 100 -17.5 -2.73243 | gap 1, overlap 2471871 ATTGATGTGCGAAAG CGAAGGGTCCTTGCGG CTG CCGC-AGGCCCCTTCG AGAATCCCCCCGTCC Paes_2294 2472430 - 2472801 + | ferric uptake regulator, Fur family Paes_2295 2473251 - 2474030 + | putative PAS/PAC sensor protein TERM 2862 2474952 - 2474938 - g 70 -5.7 -4.40561 | TGCGGTCAAAAAGAA TCGAG AACTG CTCGA TGGGCGTTGGGATAA Paes_2297 2474591 - 2475874 + | transposase IS116/IS110/IS902 family protein Paes_2298 2476014 - 2476166 + | hypothetical protein Paes_2299 2476379 - 2477464 + | filamentation induced by cAMP protein Fic Paes_2301 2477893 - 2478045 + | hypothetical protein Paes_2302 2481503 - 2478075 - | WD-40 repeat protein TERM 2863 2478476 - 2478463 - G 71 -3.1 -4.8048 | CTCTCAGATGAAAAA GGCAT TTCT ATACC AAGTGTATCACGGAA TERM 2864 2480430 - 2480444 + g 85 -11.4 -3.66178 | overlap 2480414 2480413 GCTTTGAAAACTCCA GAGCGG TTT CCGCTC TTTCACATTCCAAAC TERM 2865 2481404 - 2481422 + g 74 -8.2 -3.96892 | ACCCCACCAGACGTA CGGCAAAA CTT TTTTGCTG TTTATCGTGACGATT Paes_2303 2482069 - 2481623 - | hypothetical protein TERM 2866 2481759 - 2481779 + g 70 -6.9 -4.02049 | overlap 2481760 TCCCCTGAGTACGGT TCGGTTTTA GTG TGAAACCGG TATTTTTCCTGCTTC TERM 2867 2482051 - 2482070 + g 100 -3.6 -5.76237 | gap 1, opp_overlap 2482055, overlap 2482053 2482055 CTAAACGGTTTTCAA GGT-ACTCC TCA GGAGTCATC TTTTTTCTTTCTGTC Paes_2305 2483678 - 2484103 + | filamentation induced by cAMP protein Fic Paes_2307 2485138 - 2484773 - | hypothetical protein TERM 2868 2485077 - 2485089 + g 91 -3.4 -5.53288 | overlap 2485050 CAGGACGCGGTCAGA GATC CCCAA GATC TTTTTTTAACTTCAC Paes_2308 2485185 - 2485451 + | transposase IS3/IS911 family protein Paes_2309 2485445 - 2486293 + | Integrase catalytic region Paes_2310 2486586 - 2486338 - | transposase IS3/IS911 family protein TERM 2869 2486412 - 2486446 + g 70 -10.8 -2.82623 | opp_overlap 2486423 2486424, overlap 2486424 TTTTCTTTGCATTCT TTTTTTCGAAAGCGGC AGA GCCGTTCTCGAAAAAC TCCTTCTGCCACCGG TERM 2870 2486470 - 2486446 - G 95 -10.7 -4.56597 | opp_overlap 2486448, overlap 2486448 GCCGTTCTCGAAAAA CTCCTTCTGCC ACC GGCAGAAGACG TTAGGCTGGAGGTTG TERM 2871 2486468 - 2486448 - G 73 -11.9 -2.60032 | opp_overlap 2486448, overlap 2486446 CGTTCTCGAAAAACT CCTTCTGCC ACC GGCAGAAGA CGTTAGGCTGGAGGT Paes_2311 2486779 - 2487045 + | transposase IS3/IS911 family protein Paes_2312 2487039 - 2487887 + | Integrase catalytic region Paes_2313 2491029 - 2488075 - | UvrD/REP helicase Paes_2314 2492066 - 2491044 - | DNA-cytosine methyltransferase TERM 2872 2492143 - 2492162 + r 81 -2.2 -5.56263 | opp_overlap 2492145, overlap 2492145 CCGCAAAATTGGACA GATAAACA CAAT TGTTTATA TTTTTCTTTTATCAT TERM 2873 2492331 - 2492378 + r 100 -19.3 -3.87597 | gap 2, opp_overlap 2492327 2492328 TTTATGTATAACGCC TGGGCT-C-AGGGGCAGCGGCGC GTTA GCGCCGATGTCCCTTGGAGCCCA TTGTTATGCATTTCT Paes_2315 2493072 - 2492392 - | hypothetical protein TERM 2874 2493760 - 2493746 - R 100 -11.4 -4.75309 | TGAAAGCGAACAAAA CGCCTG GTC CAGGCG CAATATGTATCTGTT TERM 2875 2494002 - 2493992 - R 77 -2.4 -5.40072 | TTTTCCCGAAAAAAA CGGC ACA GGCG ATGCGAAACTTCTTC Paes_2318 2495364 - 2494402 - | UDP-N-acetylenolpyruvoylglucosamine reductase Paes_2319 2496787 - 2495873 - | hypothetical protein TERM 2876 2496807 - 2496821 + H 78 -5.6 -5.02074 | opp_overlap 2496807 2496805 TGCTTTTGCACAATA GCCTGC TCA GCAAGC TTTTTTGCAAAGTCA TERM 2877 2497388 - 2497373 - g 70 -5.4 -4.3208 | overlap 2497374 2497377 GTGCAGAATTCAAAA CCAAGG TCGT CCTTGA AGCCCTCAGCGAGCG TERM 2878 2497492 - 2497468 - g 73 -9.3 -3.61356 | opp_overlap 2497467 2497465 2497468, overlap 2497457 ATTACCCAGTGGAAA CGGGAGTTTCT GGA AAAAGCTCCCG ATGTATTCTCAAAAG Paes_2321 2497333 - 2497623 + | transposase IS3/IS911 family protein Paes_2322 2497647 - 2498486 + | Integrase catalytic region TERM 2879 2498789 - 2498841 + T 85 -10.8 -3.79678 | gap 2, opp_overlap 2498786 2498785 2498797, overlap 2498790 2498792 2498809 TTCATGTATAACGCT GCACAT-CAGCCGACCGAAAAA-CGC GCA GCGGTTTTTGGGTCAGCTGGATGTGA TTGTTATGAGCCATT TERM 2880 2498790 - 2498840 + T 89 -14.3 -2.87325 | gap 2, opp_overlap 2498786 2498785 2498797, overlap 2498789 2498792 2498809 TCATGTATAACGCTG CACAT-CAGCCGACCGAAAAA-CGC GCA GCGGTTTTTGGGTCAGCTGGATGTG ATTGTTATGAGCCAT TERM 2881 2498792 - 2498838 + T 76 -11.1 -2.98545 | gap 2, opp_overlap 2498786 2498785 2498797, overlap 2498790 2498789 2498809 ATGTATAACGCTGCA CAT-CAGCCGACCGAAAAA-CGC GCA GCGGTTTTTGGGTCAGCTGGATG TGATTGTTATGAGCC TERM 2882 2498832 - 2498797 - T 79 -12 -2.62933 | gap 1, opp_overlap 2498792 2498790 2498789 2498809, overlap 2498786 2498785 TAACGCTGCACATCA GCCGACCGAAAAA-CGC GCA GCGGTTTTTGGGTCAGC TGGATGTGATTGTTA Paes_2324 2499615 - 2498845 - | response regulator receiver protein TERM 2883 2499584 - 2499600 + g 83 -6.5 -4.88067 | overlap 2499561 CTTTTGGTAAACCCT TTCGCTG TTT CTGCGAA TTTTTCTGGCTCCAT Paes_2325 2500953 - 2499727 - | FRG domain protein TERM 2884 2500984 - 2501038 + r 100 -16.7 -3.7956 | gap 2, opp_overlap 2500990, overlap 2500985 2500989 2500990 2501005 GTTGCCGACGAACGC CGCAAA-TCAGCCGA-CCGATAACCGC GCA GCGGTTTTTGGGTCGGCTGAATTTGCC TTGTTAGCTTCTTTC TERM 2885 2500985 - 2501037 + r 100 -20.2 -2.86651 | gap 2, opp_overlap 2500990, overlap 2500984 2500989 2500990 2501005 TTGCCGACGAACGCC GCAAA-TCAGCCGA-CCGATAACCGC GCA GCGGTTTTTGGGTCGGCTGAATTTGC CTTGTTAGCTTCTTT TERM 2886 2500989 - 2501032 + r 100 -15.4 -3.8579 | gap 1, opp_overlap 2500990, overlap 2500985 2500984 2500990 2501005 CGACGAACGCCGCAA ATCAGCCGA-CCGATAACCGC GCA GCGGTTTTTGGGTCGGCTGAA TTTGCCTTGTTAGCT TERM 2887 2500990 - 2501031 + r 100 -18.9 -2.90751 | gap 1, opp_overlap 2500990, overlap 2500989 2500985 2500984 2501005 GACGAACGCCGCAAA TCAGCCGA-CCGATAACCGC GCA GCGGTTTTTGGGTCGGCTGA ATTTGCCTTGTTAGC TERM 2888 2501031 - 2500990 - R 100 -16.7 -3.58037 | gap 1, opp_overlap 2500990 2500989 2500985 2500984 2501005 GACGAACGCCGCAAA TCAGCCGACCGATAA-CCGC GCA GCGGTTTTTGGGTCGGCTGA ATTTGCCTTGTTAGC TERM 2889 2501005 - 2501015 + r 85 -8.2 -4.66609 | opp_overlap 2500990, overlap 2500990 2500989 2500985 2500984 TCAGCCGACCGATAA CCGC GCA GCGG TTTTTGGGTCGGCTG TERM 2890 2501821 - 2501811 - R 77 -2.4 -5.40072 | overlap 2501812 TTTTCCCGAAAAAAA CGGC ACA GGCG ATGCCAAGCCTTATC Paes_2327 2503207 - 2502245 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2891 2503507 - 2503495 - H 71 -4.1 -4.87665 | CTCGACTGACAAAAA CCTGT TGA ACAAG GAGAACACTATGAAG Paes_2328 2503517 - 2503855 + | hypothetical protein Paes_2329 2504676 - 2503909 - | nitroreductase TERM 2892 2504169 - 2504193 + g 72 -8.4 -3.73953 | CATCGGCTACGAATT GCTGCCCGAG GCAGG CGCGGGCTGC TTTGATGCCGATACT Paes_2330 2505282 - 2504848 - | cyclase/dehydrase TERM 2893 2505547 - 2505533 - g 78 -5.6 -4.79949 | overlap 2505534 TGCCGAAAAAAATAA TGCTGC TTG GCAGCG GGGAATTAGGAAAGG TERM 2894 2505546 - 2505534 - g 71 -9.1 -3.46885 | overlap 2505533 GCCGAAAAAAATAAT GCTGC TTG GCAGC GGGGAATTAGGAAAG Paes_2331 2505511 - 2506692 + | phosphoribosylglycinamide formyltransferase 2 TERM 2895 2506732 - 2506701 - T 85 -13 -2.70298 | opp_overlap 2506708, overlap 2506704 2506708 GCGTTGAATGATAAC GGACAAAGCCGCCT GAAA AGGCGGCTTTGACA AGGCAAAAAATCAAT TERM 2896 2506729 - 2506704 - T 100 -17.7 -2.63347 | opp_overlap 2506708, overlap 2506701 2506708 TTGAATGATAACGGA CAAAGCCGCCT GAAA AGGCGGCTTTG ACAAGGCAAAAAATC TERM 2897 2506708 - 2506725 + T 93 -12.7 -3.53012 | opp_overlap 2506704 2506701 2506708 ATGATAACGGACAAA GCCGCCT GAAA AGGCGGC TTTGACAAGGCAAAA TERM 2898 2506725 - 2506708 - T 100 -12.7 -4.00468 | opp_overlap 2506708, overlap 2506704 2506701 ATGATAACGGACAAA GCCGCCT GAAA AGGCGGC TTTGACAAGGCAAAA Paes_2332 2508199 - 2506763 - | RNA methyltransferase, TrmA family TERM 2899 2507851 - 2507888 + g 93 -6.1 -5.22006 | overlap 2507855 2507857 GAACGGCAATGTCGT GCATGCCGCCGATGTGC TCAA GCGCATCGGCAACTTTC TTTTTCTTATAGTGC TERM 2900 2507855 - 2507884 + g 100 -9.9 -5.09221 | overlap 2507851 2507857 GGCAATGTCGTGCAT GCCGCCGATGTGC TCAA GCGCATCGGCAAC TTTCTTTTTCTTATA TERM 2901 2507857 - 2507882 + g 70 -11.1 -2.75415 | overlap 2507855 2507851 CAATGTCGTGCATGC CGCCGATGTGC TCAA GCGCATCGGCA ACTTTCTTTTTCTTA Paes_2333 2509114 - 2508218 - | ROK family protein Paes_2334 2509719 - 2509129 - | phosphoesterase PA-phosphatase related TERM 2902 2509365 - 2509353 - G 91 -3.4 -5.47218 | CCCGACTGAAAAAAA TCCA GATCA TGGA CGCGACAGCTGCAGC Paes_2335 2511486 - 2509732 - | 60 kDa inner membrane insertion protein TERM 2903 2510232 - 2510263 + g 81 -10.2 -3.93489 | gap 1, overlap 2510227 CGGCCTCTTTGTAGA TCCTTCCAAGCTCGC TCT GC-AGCTTGGCGGGA TTATCTTTATACTTC TERM 2904 2511144 - 2511128 - G 83 -5.1 -5.13354 | opp_overlap 2511128 GTCAGAAAAAACAAA GAGAGTG CAC CACTGTC ATTCTTACGAATAAG Paes_2336 2511757 - 2511479 - | protein of unknown function DUF37 TERM 2905 2511789 - 2511779 - R 70 -6.8 -4.11692 | CATTTATCTCTAAAA CAGC TTG GCTG TCGTGGCGACCGATT Paes_2337 2512256 - 2511834 - | ribonuclease P protein component Paes_2338 2512487 - 2512326 - | ribosomal protein L34 SEQUENCE gi|194335117|ref|NC_011061.1| Prosthecochloris aestuarii DSM 271 plasmid pPAES01, complete sequence (length 66772) TERM 1 357 - 343 - g 73 -9.2 -3.65313 | overlap 353 GAAGCACATCTGAAA GCGGCC ATA AGCCGC GTTCGCAGCAAGTAT TERM 2 653 - 639 - g 71 -2.8 -4.86033 | overlap 641 AAACTTTGATAAAAA GGTGTT CAA AACAAC CATCAGAACATCTTC Paes_2339 1 - 786 + | Cobyrinic acid ac-diamide synthase TERM 3 1012 - 1002 - g 88 -5.4 -5.27779 | overlap 1010 GGGAAGACGAAAAAA TCCA AAA TGGA GCTAACCTCCCAGTT Paes_2340 840 - 1253 + | hypothetical protein TERM 4 1292 - 1259 - f 93 -9 -5.1675 | opp_overlap 1259 1257 1260, overlap 1260 TTATTCATGAAAAAA CGTCTGCAGATTCA GCACAA TTAATCTGCAGACA TGTTGCTTTAAAGCC TERM 5 1291 - 1260 - f 78 -10.3 -3.69327 | opp_overlap 1260 1259 1257, overlap 1259 TATTCATGAAAAAAC GTCTGCAGATTCA GCACAA TTAATCTGCAGAC ATGTTGCTTTAAAGC TERM 6 1260 - 1291 + F 70 -10.3 -2.59569 | opp_overlap 1259 1260, overlap 1259 1257 TATTCATGAAAAAAC GTCTGCAGATTCA GCACAA TTAATCTGCAGAC ATGTTGCTTTAAAGC Paes_2341 1471 - 1893 + | hypothetical protein Paes_2342 1890 - 2453 + | conjugal transfer protein precursor TERM 7 3730 - 3764 + G 76 -10.8 -3.31144 | opp_overlap 3730 3727 GGTTACAAAAGAGGA GTTTGTCGATGCGCAT GTC ATGCGCATGCACAAGC TTGTGAGCATGGGGC Paes_2343 2450 - 4372 + | hypothetical protein TERM 8 5222 - 5200 - g 77 -3.2 -5.03715 | ACCACTGGGAAAAAA CCGGTCATGC GCT GCTTGTCGGG GCAATCCTGCATGTG Paes_2344 4374 - 6545 + | TRAG family protein Paes_2345 6542 - 7015 + | hypothetical protein TERM 9 7049 - 7074 + F 86 -12.7 -3.15427 | opp_overlap 7049 7052, overlap 7052 GTTGTGGGTGATCAA GAATTGTGCCT GTCA GGGCACAATTC TTGATAAAAAATGTT TERM 10 7074 - 7049 - f 83 -12 -3.14132 | opp_overlap 7049 7052, overlap 7052 GTTGTGGGTGATCAA GAATTGTGCC TGTCAG GGCACAATTC TTGATAAAAAATGTT TERM 11 7071 - 7052 - f 71 -7.9 -3.71848 | opp_overlap 7049 7052, overlap 7049 GTGGGTGATCAAGAA TTGTGCC TGTCAG GGCACAA TTCTTGATAAAAAAT TERM 12 7052 - 7071 + F 75 -8.6 -3.72027 | opp_overlap 7052 7049, overlap 7049 GTGGGTGATCAAGAA TTGTGCCT GTCA GGGCACAA TTCTTGATAAAAAAT Paes_2346 7224 - 8201 + | P-type conjugative transfer ATPase TrbB TERM 13 8285 - 8265 - f 72 -8.5 -3.59979 | opp_overlap 8268 TTGTCTGACCGGAAA TTATTAACA GAA TGTTAATAA TTAGGACTTTTTTTG TERM 14 8313 - 8338 + F 78 -5.4 -4.98522 | overlap 8314 TTGTCTTTTTATCCC CCATTCCCTG ACACCC CAGGGGATGA TTTTTGTCTAACATT TERM 15 8314 - 8337 + F 75 -8.9 -3.58029 | overlap 8313 TGTCTTTTTATCCCC CATTCCCTG ACACCC CAGGGGATG ATTTTTGTCTAACAT Paes_2347 8373 - 8675 + | Conjugal transfer protein TrbC Paes_2348 8672 - 8923 + | type IV secretory pathway VirB3 family protein TERM 16 9995 - 9973 - g 77 -11.9 -3.15544 | CCCGATCTGGATGAA GCCCGGCGC CGCAT GCGCCGGGT GCGGCAGGTGATCCA TERM 17 10966 - 10956 - g 74 -2.4 -5.14163 | opp_overlap 10956 ATTGAGGAAGAAAAA CGTC TAT GTCG TCTTTGCCACGCAGG Paes_2349 8929 - 11391 + | CagE TrbE VirB component of type IV transporter system Paes_2350 11408 - 12166 + | P-type conjugative transfer protein TrbJ Paes_2351 12188 - 12382 + | hypothetical protein TERM 18 12958 - 12947 - g 71 -3 -4.78572 | TTCGAACCAACAAAA TTCA TGGC TGAA AAATCGATTGGGGCT TERM 19 13514 - 13495 - g 77 -3.4 -5.03314 | overlap 13498 13507 GTCATCCGGAAAAAA GAACCCGC CAAA GTGGGCCC AGCAGGCACTGCAGG TERM 20 13511 - 13498 - g 70 -3.7 -4.62085 | overlap 13495 13507 ATCCGGAAAAAAGAA CCCGC CAAA GTGGG CCCAGCAGGCACTGC Paes_2352 12401 - 13591 + | P-type conjugative transfer protein TrbL Paes_2353 13629 - 14321 + | Conjugal transfer protein Paes_2354 14328 - 15266 + | P-type conjugative transfer protein TrbG TERM 21 15737 - 15755 + G 82 -2.3 -5.40072 | gap 1, opp_overlap 15735, overlap 15738 GCAGGCCTATGAATC CGCCCTCG CCTC CG-GGCCG TTTTTTTCCGGACCG Paes_2355 15285 - 16571 + | conjugation TrbI family protein TERM 22 16760 - 16776 + G 70 -10.1 -3.18264 | opp_overlap 16740, overlap 16741 CGTTCCCATCTCAAG CGGGACC GCG GGTTCCG TTCATGGCTGCAGAA Paes_2356 16592 - 16867 + | hypothetical protein TERM 23 17295 - 17273 - g 72 -11.2 -3.04144 | TTCCTATCTCGAAGA GCGTGGCATC ACC GCCGCCACGC TCCGGGACTTCCGGT Paes_2357 16857 - 17816 + | hypothetical protein TERM 24 17927 - 17956 + F 76 -6.3 -4.4715 | gap 1, overlap 17928 TTCCTTCCATGCTCA CCCCGGTCCC-TGC CGT GCACGGGGACGGGC TTTTGTCCCTTCGGG TERM 25 17928 - 17955 + F 74 -9.8 -3.27808 | gap 1, overlap 17927 TCCTTCCATGCTCAC CCCGGTCCC-TGC CGT GCACGGGGACGGG CTTTTGTCCCTTCGG TERM 26 17981 - 17993 + F 70 -10.5 -2.62933 | TTCGGGATCGAGCTT CCGCC GCT GGCGG TGATCTCGACCATTC TERM 27 18267 - 18238 - g 77 -11.3 -3.20991 | TGGAAGTGAAGTCAA GCCGCCCGGTCCG TGTA CAGACCCGGCGGG AAACAACCTGCAGGC TERM 28 18495 - 18466 - g 77 -11.3 -3.17798 | overlap 18458 GCAGAAATCAGTCAA GCCGCCATGGCCG CAGG CGGCCAAGACGGA TGAGGAGCATAGTGC TERM 29 18684 - 18655 - g 77 -11.3 -3.20991 | TGGAAGTGAAGTCAA GCCGCCCGGTCCG TGTA CAGACCCGGCGGG AAACAACCTGCAGGC Paes_2358 18204 - 18719 + | hypothetical protein TERM 30 18890 - 18861 - f 81 -11.3 -3.17798 | overlap 18853 GCAGAAATCAGTCAA GCCGCCATGGCCG CAGG CGGCCAAGACGGA TGAGGAGCATAGTGC TERM 31 19079 - 19050 - f 81 -11.3 -3.20991 | TGGAAGTGAAGTCAA GCCGCCCGGTCCG TGTA CAGACCCGGCGGA AGAAAACCTGCAGGC Paes_2359 19514 - 19657 + | hypothetical protein TERM 32 19710 - 19679 - f 84 -9.6 -4.20368 | gap 1 TTAGGGCAAGATAAA GCAATG-TTAACACG TTC CGTGTAAACCATTGC AAAATATTACACTAA TERM 33 19805 - 19791 - f 100 -5.7 -5.69068 | TAAAAACAGAAAAAA CAGGT AGTTA ACCTG TTAACAATGCCTGAT TERM 34 20059 - 20075 + G 71 -2.9 -4.74285 | TGGCAGCCCTGAACG CCGATTC AAT GGATGGG TTTTGTCTTGTCAAT Paes_2360 19926 - 20183 + | hypothetical protein TERM 35 20609 - 20598 - g 70 -3.6 -4.62336 | opp_overlap 20600, overlap 20599 20600 ACCGTAGCCGAAAAA CCCG CTTT CAGG AAAGCGTTTCATTCC TERM 36 20600 - 20615 + G 72 -7.6 -3.91911 | opp_overlap 20598 20600 20599 CGTAGCCGAAAAACC CGCTTT CAGG AAAGCG TTTCATTCCCATCGC Paes_2361 20352 - 21032 + | protein of unknown function DUF159 Paes_2362 21037 - 21303 + | hypothetical protein TERM 37 21997 - 21986 - g 74 -5.8 -4.56775 | AGGTCTGCCGAAAAA CCTG GTGT CAGG CAAGGAGTATCGCGG Paes_2363 21882 - 22709 + | domain of unknown function DUF1738 TERM 38 22726 - 22761 + T 79 -9 -3.86346 | overlap 22727 CATCGGGGTGGATTG CGGTGCCGGATGAA GATTTCCA TCCATCCGGCACCA TTTATCGGCGGGTGG TERM 39 22727 - 22760 + T 82 -12.5 -2.91593 | overlap 22726 ATCGGGGTGGATTGC GGTGCCGGATGAA GATTTCCA TCCATCCGGCACC ATTTATCGGCGGGTG Paes_2364 23110 - 22781 - | hypothetical protein TERM 40 23327 - 23317 - g 77 -8.2 -4.07568 | TTTGGCGGGGCAAAA CCGG CTT CCGG ATCAAAAAAGCCAAA Paes_2365 23218 - 23481 + | hypothetical protein TERM 41 25507 - 25494 - g 84 -3.8 -5.26316 | GCAGGCTATAAAAAA TGGC GGAGCG GCCA TGACGGCATATGCGC Paes_2366 23656 - 25647 + | hypothetical protein Paes_2367 25714 - 27243 + | putative transcriptional regulator TERM 42 27285 - 27298 + F 71 -3.9 -4.77925 | opp_overlap 27293, overlap 27286 27293 TTTTTTTTGTGTATG GTAAA GAAC TTTAC TTTTTAAAGTTTTTT TERM 43 27293 - 27307 + F 89 -2.9 -5.70522 | opp_overlap 27293, overlap 27285 27286 GTGTATGGTAAAGAA CTTTA CTTTT TAAAG TTTTTTATTGTTATT Paes_2368 27352 - 27720 + | nuclease (SNase domain protein) Paes_2369 28012 - 29352 + | hypothetical protein Paes_2370 29361 - 30293 + | hypothetical protein TERM 44 30314 - 30296 - f 70 -3 -5.00196 | GTCTAAACAATAAAA CTGCCTTG AAA CATGGAAG AGTCATCAGTCAACA Paes_2371 30308 - 30652 + | hypothetical protein Paes_2372 30785 - 32176 + | Radical SAM domain protein TERM 45 32234 - 32205 - T 71 -8.6 -3.48276 | gap 1, opp_overlap 32205 32214 TTCCCGGGCATATAA TGCGGGA-TAGGC TCATG GCCTTCTCCCGCA TTATGCGCATCAAAT TERM 46 32205 - 32234 + T 71 -9.3 -3.31263 | gap 1, opp_overlap 32205, overlap 32214 TTCCCGGGCATATAA TGCGGGA-TAGGCT CAT GGCCTTCTCCCGCA TTATGCGCATCAAAT Paes_2373 32535 - 32257 - | protein of unknown function nitrogen fixation TERM 47 32793 - 32769 - H 72 -8.6 -3.63744 | gap 1, overlap 32767 32771 32772 CCCTGCGGCAAAACA TACCGCCCGGC ATGT GCCGGGCA-TA CAACAACTCCAGACG TERM 48 32792 - 32771 - H 71 -9.3 -3.39908 | overlap 32769 32767 32772 CTGCGGCAAAACATA CCGCCCGGC ATGT GCCGGGCAT ACAACAACTCCAGAC TERM 49 32791 - 32772 - H 81 -12.8 -2.63623 | overlap 32771 32769 32767 TGCGGCAAAACATAC CGCCCGGC ATGT GCCGGGCA TACAACAACTCCAGA TERM 50 33334 - 33318 - g 71 -2.9 -4.8048 | overlap 33321 CCTTGATACGAAAAA CAAGATC ATC GGCCTTG AGATGATCAGCCGCG TERM 51 33342 - 33321 - g 70 -4.5 -4.50988 | overlap 33318 TGATACGAAAAACAA GATCATC GGCCTTGA GATGATC AGCCGCGGCACATTG Paes_2374 33094 - 33591 + | DNA repair protein RadC TERM 52 33599 - 33618 + F 100 -16.4 -3.09878 | opp_overlap 33592 TGATATGAGGTTTAG GGCCCGGC TGCA GCCGGGCC TATTCCCTCAATACA TERM 53 33855 - 33886 + G 80 -5.2 -4.946 | overlap 33857 33874 AAAAGGGGAGCATTA CCGCATATCTTTTT GAAC AGGAAGATGTGCCG TTTTTCGTGTTTGAT Paes_2375 33695 - 34201 + | hypothetical protein TERM 54 34201 - 34234 + F 86 -10.9 -4.10925 | opp_overlap 34203 34205, overlap 34205 34231 AGAGTTCAGACGATA AATATCAGGGCCCGG CAAG CCGGGCCCTGATTCC TTTTCAGGAATATCT TERM 55 34232 - 34203 - f 100 -17.9 -4.01888 | opp_overlap 34201 34205 34231, overlap 34205 AGTTCAGACGATAAA TATCAGGGCCCGG CAAG CCGGGCCCTGATT CCTTTTCAGGAATAT TERM 56 34230 - 34205 - f 100 -20.5 -3.60104 | opp_overlap 34205 34201, overlap 34203 TTCAGACGATAAATA TCAGGGCCCGG CAAG CCGGGCCCTGA TTCCTTTTCAGGAAT TERM 57 34205 - 34230 + F 100 -20.5 -3.67175 | opp_overlap 34203 34205, overlap 34201 TTCAGACGATAAATA TCAGGGCCCGG CAAG CCGGGCCCTGA TTCCTTTTCAGGAAT Paes_2376 34362 - 34673 + | hypothetical protein Paes_2377 34705 - 34815 + | hypothetical protein Paes_2378 36319 - 35042 - | DNA-directed DNA polymerase Paes_2379 36661 - 37887 + | hypothetical protein Paes_2380 40442 - 38085 - | TPR repeat-containing protein TERM 58 38912 - 38922 + g 70 -6.8 -4.08974 | AGGCCAGAAGGGACT GGAG CAT CTCC TTTCTGTAGTGAGCT TERM 59 39467 - 39450 - G 88 -11.3 -3.85698 | opp_overlap 39435 39438 TCGCTGTTTCAGAAA CGCGATG GATT CATCGCG TTCCCAGACCGTTAC TERM 60 40156 - 40169 + g 80 -5.3 -4.95155 | opp_overlap 40156 GGCTCGATGCGAACA GGAAT GAGT ATTCC TTTTTCTCCTGTGGG Paes_2381 41152 - 40562 - | Resolvase domain Paes_2382 43652 - 41349 - | hypothetical protein Paes_2384 44116 - 43958 - | hypothetical protein TERM 61 44005 - 44020 + g 74 -10.4 -3.53343 | opp_overlap 44015 CAAAAAATATCTCGA TCCCCG CAAA CGGGGA TTTCACCCGGAGCTT Paes_2385 44959 - 44168 - | protein of unknown function DUF323 TERM 62 45059 - 45084 + r 80 -6.1 -4.8048 | gap 1, opp_overlap 45030, overlap 45060 CGGACAATTTATTTT TCGGCGTGGAGT GCT GCTCCA-GCCGC TTTTTGCTATCCGAG TERM 63 45060 - 45083 + r 75 -9.6 -3.47806 | gap 1, opp_overlap 45030, overlap 45059 GGACAATTTATTTTT CGGCGTGGAGT GCT GCTCCA-GCCG CTTTTTGCTATCCGA Paes_2386 45417 - 45121 - | hypothetical protein Paes_2387 46741 - 45728 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 64 46527 - 46506 - G 74 -7.9 -4.11394 | opp_overlap 46509, overlap 46507 ACCCGATCCTGAAAA TCCGCCGCA CTGA TACGGCGGG GCTTGGGTTCGCGGA TERM 65 46526 - 46507 - G 75 -11.4 -3.06515 | opp_overlap 46509, overlap 46506 CCCGATCCTGAAAAT CCGCCGCA CTGA TACGGCGG GGCTTGGGTTCGCGG Paes_2388 47100 - 46738 - | hypothetical protein Paes_2389 47551 - 47072 - | HRDC domain protein TERM 66 47244 - 47255 + gr 70 -4.4 -4.57569 | CAGATCACATAAGGC GGAA TACC TTCC TTTTTACAACGCTCG TERM 67 47460 - 47442 - GR 78 -6 -4.70887 | TTACGAATAAAGAAA TGCTCCCT CAG AGAAAGCA CAGATTTATCCTTGA TERM 68 47638 - 47653 + r 77 -10.4 -3.53343 | opp_overlap 47648 CAAAAAATATCTCGA TCCCCG CAAA CGGGGA TTTCACCCGGAGCTT Paes_2390 48682 - 47801 - | protein of unknown function DUF323 TERM 69 49130 - 49116 - R 100 -11.4 -4.75309 | TGAAAGCGAACAAAA CGCCTG GTC CAGGCG CAGTACGTATCTGTT TERM 70 49372 - 49362 - R 78 -5.4 -5.02476 | ATATTCCCGAAAAAA CGAT ACC ATCG ATAGCAAGCCCCATC Paes_2392 49979 - 49386 - | Resolvase domain TERM 71 50079 - 50059 - R 91 -9.7 -4.65895 | opp_overlap 50058 50070 GTTTTCAGCGAAAAA CAGGGGC TTTGTGG GCCCCTG CTCATATGTCTCAAA Paes_2393 50426 - 50121 - | hypothetical protein Paes_2394 51606 - 50731 - | hypothetical protein TERM 72 52172 - 52162 - R 70 -5.4 -4.30416 | opp_overlap 52162, overlap 52156 AGTAGGAAGGCAAAA TCAG CCG CTGA CTTTGGGGCAATGCC Paes_2396 54352 - 53219 - | anticodon nuclease TERM 73 53308 - 53289 - G 70 -5.7 -4.3739 | overlap 53291 TAGTTGTTCATAAAA TCCCGGA GGATTT TCCGGAA GTAGTCCTTGTTTTC Paes_2397 55602 - 54349 - | restriction modification system DNA specificity domain TERM 74 54976 - 54993 + g 82 -2.6 -5.35222 | opp_overlap 54978, overlap 54980 54981 54991 ACCTTCCCGGGGGAA GAGCTG CTGCAT CAGCCC TTTTTTATGGGTTTT Paes_2398 58642 - 55595 - | type I site-specific deoxyribonuclease, HsdR family TERM 75 55626 - 55639 + g 90 -4.5 -5.42259 | gap 1, overlap 55627 AATCCTGATATTTCG C-GGCC TTG GGCCTG TTTTTTTAAAAATGG TERM 76 55627 - 55637 + g 81 -8.2 -4.35085 | overlap 55626 ATCCTGATATTTCGC GGCC TTG GGCC TGTTTTTTTAAAAAT TERM 77 55826 - 55843 + g 77 -2.7 -5.04325 | overlap 55816 CTTGTCTGCCATCGA GCTGA GCTCACTG TCAGC TTTTTGTGCTTTGAA TERM 78 57405 - 57387 - G 74 -7.4 -4.11216 | GGGGTACCGGTAAAA CCAAAGAG TTG CGCTTTGG GAAAGAAGGTCTTGA TERM 79 58064 - 58053 - G 74 -2.2 -5.14477 | TAGATAGGCAAAAAA CGCT CATC AGCA TTGAAGGCAAAGTGC TERM 80 58877 - 58864 - H 71 -8.1 -3.72695 | ATCCCGCTCATCAAA CTGGG CATG CCCAG CATCCGATGTCAGGA Paes_2399 59144 - 59344 + | hypothetical protein Paes_2400 61358 - 59409 - | TPR repeat-containing protein Paes_2401 61688 - 61380 - | hypothetical protein Paes_2402 62444 - 61728 - | alpha-helical coiled-coil protein TERM 81 63094 - 63082 - H 70 -5.5 -4.36262 | ACATGTATAGGAAAA GACGC ACA GCATC ATGAAAAAACAGATC Paes_2403 63095 - 63316 + | CopG domain protein DNA-binding domain protein TERM 82 63358 - 63348 - g 72 -8.2 -3.84185 | GCGATGGAAATAGAA GCCG AAT CGGC CAAGGAGGCTGGAAC Paes_2404 63336 - 64160 + | plasmid encoded RepA protein TERM 83 64259 - 64217 - T 81 -12.4 -2.54523 | opp_overlap 64227, overlap 64227 TCACAGGGGAATCCA TATCTATAAATCTGTAAATT TTC AATTCACAGATTTATAGACT CAGCGATCCTCACTC TERM 84 64249 - 64227 - T 76 -8.6 -3.9534 | opp_overlap 64227, overlap 64217 ATCCATATCTATAAA TCTGTAAATT TTC AATTCACAGA TTTATAGACTCAGCG TERM 85 65817 - 65805 - T 81 -6.3 -4.95758 | opp_overlap 65805 65804 AGTACATGACAAAAA GCATA CAT TATGC GTATCTTGTCCATGA Paes_2405 66112 - 65930 - | hypothetical protein