TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.597236 %AT, 3368753 nt, 23803 terms. Intergenic: 0.675776 %AT, H2T: 482066 nt, 4544 terms; T2T: 112907 nt, 2755 terms; H2H: 186560 nt, 2966 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|197283915|ref|NC_010554.1| Proteus mirabilis HI4320, complete genome (length 4063606) TERM 1 2303 - 2291 - g 70 -3.4 -4.91873 | opp_overlap 2294 TAGATGAAGGAAAAA GCTT GTCTG AAGC GACACTTTCTGCGAA TERM 2 2339 - 2326 - g 78 -3.8 -5.27335 | TCTGCGAAAGAAAAA GGCT TTACAG AGCC AGATCCAAGAGATGA thrA 337 - 2796 + | bifunctional aspartokinase/homoserine dehydrogenase TERM 3 3469 - 3459 - g 73 -5.4 -4.60317 | ACACAACAACCAAAA CTTG CCG CAAG CTTAATGAAAGATGT thrB 2778 - 3728 + | homoserine kinase thrC 3732 - 5024 + | threonine synthase TERM 4 5084 - 5066 - f 80 -7.4 -4.72272 | opp_overlap 5066 TGTTTTTATTAAAAA GCTCACTA TAA TGGTGAGC TTTTTTATTGTTTTA TERM 5 5066 - 5084 + F 100 -9.6 -5.77677 | opp_overlap 5066 TGTTTTTATTAAAAA GCTCACTA TAA TGGTGAGC TTTTTTATTGTTTTA TERM 6 11012 - 11025 + G 83 -3.1 -5.52986 | CCTGTTTTTGAGGAT GAGGT GGAT ATCTC TTTTTTTGATAAAAT PMI0004 5204 - 13534 + | RTX-family protein TERM 7 13552 - 13583 + T 100 -13.3 -2.59458 | opp_overlap 13558, overlap 13558 TCCCTTGTGACCCAA TAAAAATAGCCCT ATTTTC AGGGCTATTTTTA TGAATTACTATCATT TERM 8 13577 - 13558 - T 95 -8.6 -5.10461 | opp_overlap 13552 13558 GTGACCCAATAAAAA TAGCCCTA TTTT CAGGGCTA TTTTTATGAATTACT TERM 9 13558 - 13577 + T 87 -7.9 -4.92314 | opp_overlap 13558, overlap 13552 GTGACCCAATAAAAA TAGCCCT ATTTTC AGGGCTA TTTTTATGAATTACT PMI0005 14403 - 13618 - | hypothetical protein TERM 10 13911 - 13930 + g 73 -7.2 -3.98804 | gap 1, opp_overlap 13910 13907 13908, overlap 13911 13929 TAACCAAGATATTAT C-CCCTTGA GCT TCAAGGGCG TTATTTAACGTTTCA talB 14706 - 15659 + | transaldolase B TERM 11 15718 - 15686 - f 80 -10.6 -2.69598 | opp_overlap 15686, overlap 15685 15684 15688 ATTCTTATAAAAACT GACAACACCCACTT TAAAT AGGGGGGTGTTGTC TTTTTTTTTATTGCA TERM 12 15686 - 15718 + F 100 -12.8 -6.36459 | opp_overlap 15686 15685 15684 15688 ATTCTTATAAAAACT GACAACACCCACTT TAAAT AGGGGGGTGTTGTC TTTTTTTTTATTGCA PMI0007 15844 - 16827 + | hypothetical protein TERM 13 16854 - 16872 + F 100 -10.3 -5.1675 | opp_overlap 16854 TAATGTGATAAAAAA CGGGAGT ATAAA ACTCCCG TTTTTTCATAGCTAA TERM 14 16872 - 16854 - f 100 -10.3 -5.27923 | opp_overlap 16854 TAATGTGATAAAAAA CGGGAGT ATAAA ACTCCCG TTTTTTCATAGCTAA mog 16989 - 17576 + | molybdopterin biosynthesis protein TERM 15 18439 - 18429 - g 76 -3.2 -5.28481 | CACGTAACGAAAAAA TGGC TCC ACCA CAAGTTTCTGCTGAA dnaK 18101 - 20026 + | chaperone protein DnaK (heat shock protein 70) TERM 16 20076 - 20111 + F 91 -11.8 -3.48924 | opp_overlap 20079, overlap 20079 20081 CAGTTACTGATACCG AAACACGGGCGTCGAG GCAA CTCTACGCCCGTGTGC TTATGTCAAGGGTAA TERM 17 20108 - 20079 - f 100 -17.9 -3.71873 | opp_overlap 20079 20076 20081 TTACTGATACCGAAA CACGGGCGTCGAG GCAA CTCTACGCCCGTG TGCTTATGTCAAGGG TERM 18 20079 - 20108 + F 100 -17.9 -2.88822 | opp_overlap 20079, overlap 20076 20081 TTACTGATACCGAAA CACGGGCGTCGAG GCAA CTCTACGCCCGTG TGCTTATGTCAAGGG TERM 19 20081 - 20106 + F 100 -14.7 -2.99449 | opp_overlap 20079, overlap 20079 20076 ACTGATACCGAAACA CGGGCGTCGAG GCAA CTCTACGCCCG TGTGCTTATGTCAAG TERM 20 20253 - 20226 - g 70 -7.8 -3.76224 | CGTTTAGCGATGAAA TATCACCCAGAT CGTA ATCAAGGTGATA AAGATTCGGAATCTA TERM 21 20731 - 20721 - g 71 -6.8 -4.04394 | GGTAAAGTAATTAAA GAGC CTT GCTC TAAATGTCATGGTGA TERM 22 20795 - 20785 - g 73 -6.8 -4.21194 | CCTTATCAGTTAAAA TCCC GGC GGGA GTGGATACCGGTGAT dnaJ 20133 - 21269 + | chaperone protein DnaJ TERM 23 21322 - 21297 - f 71 -5.5 -4.59773 | opp_overlap 21298 21312 CTTCATTCCCAAAAA GCCTGATAA TGTATTGC CTATCAGGC TTTTTCTTATTAATT TERM 24 21312 - 21322 + F 93 -6.8 -5.3321 | opp_overlap 21297, overlap 21298 GCCTGATAATGTATT GCCT ATC AGGC TTTTTCTTATTAATT TERM 25 22074 - 22094 + G 75 -5.4 -4.74801 | TAAAAGAAGGTTCAT TAGCGCAA CGTGA TCGCGCTA TTTTTCCTGCAATTG nhaA 21812 - 22990 + | Na+/H+ antiporter TERM 26 23048 - 23084 + F 100 -18.9 -4.8543 | opp_overlap 23050, overlap 23050 CGAGCTATAAACATA AACCTACGGCGCAATAC CTT GTATTGTGCCGTAGGTG TTTTTATGAGGATTG TERM 27 23082 - 23050 - f 100 -19.3 -4.40605 | opp_overlap 23048 23050 AGCTATAAACATAAA CCTACGGCGCAATAC CTT GTATTGTGCCGTAGG TGTTTTTATGAGGAT TERM 28 23050 - 23082 + F 100 -21.5 -4.04397 | opp_overlap 23050, overlap 23048 AGCTATAAACATAAA CCTACGGCGCAATAC CTT GTATTGTGCCGTAGG TGTTTTTATGAGGAT nhaR 23179 - 24075 + | transcriptional activator protein NhaR TERM 29 24133 - 24146 + T 100 -9.5 -5.00616 | opp_overlap 24133 CAGAATGTAAAAAAA CCGGC CTAA GCCGG TTTTTTAAACACAAA TERM 30 24146 - 24133 - T 100 -9.5 -5.55698 | opp_overlap 24133 CAGAATGTAAAAAAA CCGGC CTAA GCCGG TTTTTTAAACACAAA rpsT 24430 - 24170 - | 30S ribosomal protein S20 TERM 31 24366 - 24383 + g 75 -7.7 -4.11216 | ATTGAACGACGGCTT GCGTTGT GCTG ACGACGC TTTTCAGACTGAACC ribF 24861 - 25802 + | riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase) ileS 25832 - 28642 + | isoleucyl-tRNA synthetase TERM 32 28733 - 28759 + G 75 -10.3 -2.95894 | opp_overlap 28732 28727 GGTACAAAACAGTAT TTCATGCAGAC ATTCC GTCTGTATGAA TCTGTGGCTGTTATG lspA 28643 - 29161 + | lipoprotein signal peptidase TERM 33 29210 - 29185 - f 100 -13.3 -4.43879 | opp_overlap 29182 ATCAGTTAACTAAAA TAACCCCTGCC TAAT GGCGGGGGTTA CGCTTAATAGAAGGT fkpB 29232 - 29702 + | FKBP-type peptidyl-prolyl cis-trans isomerase lytB 29683 - 30636 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 34 30685 - 30668 - f 88 -11.3 -3.22388 | opp_overlap 30668 CATTTAATTTACCAA GCAGAGC CTAG GCTCTGC TTTTTTTATCTCCTT TERM 35 30668 - 30685 + F 100 -11.3 -5.75478 | opp_overlap 30668 CATTTAATTTACCAA GCAGAGC CTAG GCTCTGC TTTTTTTATCTCCTT dapB 30879 - 31700 + | dihydrodipicolinate reductase TERM 36 33207 - 33231 + G 75 -5.5 -4.78764 | overlap 33208 33210 CACCCAGAAGCGAGT CCAGGGCCGCA TGA TGCGGCGCCGC TTTTTGATCACTTTA TERM 37 33208 - 33230 + G 74 -9 -3.46174 | overlap 33207 33210 ACCCAGAAGCGAGTC CAGGGCCGCA TGA TGCGGCGCCG CTTTTTGATCACTTT TERM 38 33210 - 33229 + G 72 -10 -2.6662 | gap 1, overlap 33208 33207 CCAGAAGCGAGTCCA GG-GCCGCA TGA TGCGGCGCC GCTTTTTGATCACTT carA 32136 - 33299 + | carbamoyl-phosphate synthase small chain TERM 39 33720 - 33706 - g 73 -8.6 -3.68962 | GCGGAAGATAGACAA CGCTTT GAT AAAGCG ATGAAAAAAATTGGT carB 33316 - 36543 + | carbamoyl-phosphate synthase large chain TERM 40 36567 - 36597 + F 100 -14.9 -5.75538 | opp_overlap 36567 TTGTTGTTATAACAA TCCCGAATGGGTA TTAAT TACCTATTCGGGA TTTTTCTTTTTTCGA TERM 41 36597 - 36567 - f 100 -12.7 -3.78934 | opp_overlap 36567 TTGTTGTTATAACAA TCCCGAATGGGTA TTAAT TACCTATTCGGGA TTTTTCTTTTTTCGA TERM 42 36654 - 36631 - f 100 -9.6 -5.19003 | AATAGAAAAAAGAAA GCCCCACATA ACGA CATGTAGGGC GAGTGCAAAACAAAG TERM 43 36844 - 36834 - f 70 -4 -5.10029 | overlap 36837 ATTAATTTTAAAAAA TACT ACC AGTA AGGTATAGAGGTGAG TERM 44 36968 - 36937 - f 100 -13.2 -4.98672 | opp_overlap 36884 36964 GCCAAAAAGACAAAA GCCCCGAATTTTAT TTTC ATAAAATCCGAGGC AGTCTCAAAGCTCAA PMI0022 37025 - 37168 + | cell killing protein TERM 45 37170 - 37196 + T 91 -8.1 -5.10208 | gap 2, overlap 37174 37174 TGTGTCATCAATAGC TTGATGGGGGAGG TTT CCTCCCCC--CAA TTTTTGTTCAAGTTG TERM 46 37174 - 37194 + T 89 -12.5 -2.7794 | overlap 37170 37174 TCATCAATAGCTTGA TGGGGGAGG TTT CCTCCCCCC AATTTTTGTTCAAGT TERM 47 37174 - 37195 + T 89 -10.9 -3.6504 | gap 1, overlap 37174 37170 TCATCAATAGCTTGA TG-GGGGAGG TTT CCTCCCCCCA ATTTTTGTTCAAGTT PMI0023 44316 - 37240 - | intimin/invasin TERM 48 38340 - 38379 + g 86 -9.4 -4.13246 | AACTTAGTGCAGCTT TTTCTTGCTGATAGTCTA CAGT TTGGCTATCAGCTAGGAA TTTATCTGTAGCATC TERM 49 39645 - 39661 + g 78 -3.7 -5.22289 | CGCTTACTTGTTGGT TGGGGAT GAT ATTTCCA TTTTTATCTTTAATA TERM 50 42929 - 42943 + g 73 -7.8 -3.81027 | CCATGATGTTTTATT TGCCCG CCT TGGGCA TTTAACTTACTTGCG TERM 51 44081 - 44091 + g 78 -2.6 -5.44119 | opp_overlap 44081 ATCAATTTAAATAAT TTTA TAT TAAA TTTTTTTGCGATAGA TERM 52 44593 - 44570 - R 100 -10.4 -5.12068 | opp_overlap 44570 TATAGTTAATAAAAA GCCAATAGCA AGAG TACTATTGGC TTACTTATAGAGCGT TERM 53 44570 - 44593 + r 73 -8.2 -3.44325 | opp_overlap 44570 TATAGTTAATAAAAA GCCAATAGCA AGAG TACTATTGGC TTACTTATAGAGCGT dkgA 45445 - 44615 - | 2,5-diketo-D-gluconic acid reductase A PMI0025 46630 - 45473 - | iron-containing alcohol dehydrogenase PMI0026 46818 - 47600 + | hypothetical protein TERM 54 47726 - 47754 + T 100 -10.5 -4.89233 | opp_overlap 47726 ATAATACATAAAAAA CGCCATTATTT TCACTTT AAATAATGGCG TTTTTGGTGTTACTC TERM 55 47754 - 47726 - T 100 -10.5 -5.48787 | opp_overlap 47726 ATAATACATAAAAAA CGCCATTATTT TCACTTT AAATAATGGCG TTTTTGGTGTTACTC PMI0027 48449 - 47778 - | DedA-family membrane protein TERM 56 48520 - 48547 + r 90 -4.8 -5.86061 | opp_overlap 48524, overlap 48521 48524 AGATGATCGTTTGAT TTAATCCCTGTG AAAC CACAGGGATAGC TTTTTTTTAATAAAA TERM 57 48521 - 48546 + r 79 -8.3 -4.10552 | opp_overlap 48524, overlap 48520 48524 GATGATCGTTTGATT TAATCCCTGTG AAAC CACAGGGATAG CTTTTTTTTAATAAA TERM 58 48543 - 48524 - R 90 -12.2 -3.05596 | opp_overlap 48521 48520 48524 GATCGTTTGATTTAA TCCCTGTG AAAC CACAGGGA TAGCTTTTTTTTAAT TERM 59 48524 - 48543 + r 90 -12.2 -3.0623 | opp_overlap 48524, overlap 48521 48520 GATCGTTTGATTTAA TCCCTGTG AAAC CACAGGGA TAGCTTTTTTTTAAT metC 49767 - 48574 - | cystathionine beta-lyase TERM 60 48800 - 48815 + g 76 -7.6 -4.15748 | opp_overlap 48800 48799 AGAAAACGTGAAAAT TCCTCA GTGG TGAGGA TCTTTTTTAGACTAA TERM 61 49070 - 49055 - G 76 -7.6 -4.1552 | opp_overlap 49055 49054 49057 CACTGGCCTAATAAA TACGTG TTTT CACGTA ATTGTGGCCAACAAC exbB 50098 - 51108 + | biopolymer transport protein TERM 62 51301 - 51334 + G 70 -3.3 -4.87665 | opp_overlap 51301 51302 51325, overlap 51302 CCTCGGCCAGAAAAA CCTGTTTATTTGA CGATTAAA TCAGATAAACAGA TTTTTATCGGTGAAG exbD 51115 - 51543 + | biopolymer transport protein TERM 63 51575 - 51612 + F 100 -10.8 -5.4833 | opp_overlap 51572 51570 51575 TACTTAAAAATATCA GCACTCTATCAGTCAT ATTGTA ATGATTAATAGAGTGC TTTTTTATTCACTAA TERM 64 51612 - 51575 - f 84 -10.8 -3.02902 | opp_overlap 51575, overlap 51572 51570 TACTTAAAAATATCA GCACTCTATCAGTCAT ATTGTA ATGATTAATAGAGTGC TTTTTTATTCACTAA TERM 65 51869 - 51881 + F 76 -3.5 -5.34365 | overlap 51867 TATTTTTTCACTTTT TATTT GAT AAATA TTTTTGTTCTTATGG TERM 66 52272 - 52247 - f 100 -12 -4.42851 | opp_overlap 52247 TTAATAAATTTAAAA GCCATAGTAC TTCGCG GTACTATGGC TTTTTGTTTTATTAC TERM 67 52247 - 52272 + F 100 -12.7 -5.62288 | opp_overlap 52247 TTAATAAATTTAAAA GCCATAGTACT TCGC GGTACTATGGC TTTTTGTTTTATTAC TERM 68 53006 - 53018 + F 72 -3.5 -5.25799 | opp_overlap 53006, overlap 53000 GTTGAAAATTAGAAA TAATA AAT TATTA TTTTTGTATTATTTT hyb0 53376 - 54500 + | hydrogenase-2 small chain precursor hybA 54497 - 55510 + | hydrogenase-2 4fe-4s subunit hybB 55497 - 56678 + | hydrogenase-2 cytochrome b subunit hybC 56675 - 58378 + | hydrogenase-2 large subunit TERM 69 58445 - 58469 + G 95 -12.9 -3.53091 | opp_overlap 58450, overlap 58447 58450 TTGGTGTTCGTATCG TAGAAGCGCTC GAA GAGCGCTTCTC TTTACCGGAGAACGT TERM 70 58447 - 58467 + G 100 -15.5 -3.34398 | opp_overlap 58450, overlap 58445 58450 GGTGTTCGTATCGTA GAAGCGCTC GAA GAGCGCTTC TCTTTACCGGAGAAC TERM 71 58450 - 58464 + G 90 -11.4 -3.81488 | opp_overlap 58450, overlap 58447 58445 GTTCGTATCGTAGAA GCGCTC GAA GAGCGC TTCTCTTTACCGGAG TERM 72 58464 - 58450 - g 85 -11.4 -3.32844 | opp_overlap 58450 58447 58445 GTTCGTATCGTAGAA GCGCTC GAA GAGCGC TTCTCTTTACCGGAG hybD 58378 - 58866 + | hydrogenase 2 maturation protease hybE 58863 - 59357 + | hydrogenase-2 subunit TERM 73 59715 - 59732 + G 71 -4.1 -4.93296 | opp_overlap 59715, overlap 59692 CCATTACCATAATAG TGGCGAT GTTC ATCTCCA TTTTTATCATGATGC TERM 74 60034 - 60052 + G 75 -10.4 -3.0464 | opp_overlap 60036, overlap 60036 GTTCATAATCGTGAA CATTTTGC CCA GCAAAATG TATTGGCGCTGAATT hypB 59419 - 60615 + | hydrogenase nickel incorporation protein hybG 60606 - 60872 + | hydrogenase-2 maturation protein hypD 60856 - 61995 + | hydrogenase formation protein hypE 61992 - 63011 + | hydrogenase formation protein TERM 75 63064 - 63097 + F 80 -7.6 -4.29327 | overlap 63060 63067 TAAGTTATTTCTCTG TTACAGAAGTTTGT TATAAC GCAAACTTCTGTCA TTTATCTTAATTCTG TERM 76 63067 - 63094 + F 74 -9.3 -3.12856 | overlap 63060 63064 GTTATTTCTCTGTTA CAGAAGTTTGT TATAAC GCAAACTTCTG TCATTTATCTTAATT PMI0041 63205 - 64431 + | hypothetical protein TERM 77 64620 - 64604 - g 71 -5.1 -4.64766 | opp_overlap 64605, overlap 64605 CTTAGATGCGAAAAA CTACGGT TAT ACCGTAT TAGATATTCAGCAAG TERM 78 64619 - 64605 - g 70 -8.6 -3.38378 | opp_overlap 64605, overlap 64604 TTAGATGCGAAAAAC TACGGT TAT ACCGTA TTAGATATTCAGCAA PMI0042 64428 - 64670 + | SirA-like protein TERM 79 64721 - 64694 - T 74 -2.1 -5.66684 | gap 1, opp_overlap 64694 TAATTGATAAAAAAA CAGCCTGATC ATAGCGTGA GAT-AGGCTG TTTTTTTGTACTATG TERM 80 64694 - 64721 + T 81 -4.2 -5.69473 | gap 1, opp_overlap 64694 TAATTGATAAAAAAA CAGCCTGATCATA GCG TGAGAT-AGGCTG TTTTTTTGTACTATG rdgC 65661 - 64753 - | recombination associated protein RdgC TERM 81 66744 - 66757 + H 74 -3.9 -5.1383 | opp_overlap 66744 CCCTTATTTAAATAG TAATG AGGA CATTA TTTTTGTGTCTTATT PMI0044 66979 - 68184 + | outer membrane protein TERM 82 68248 - 68219 - f 91 -12.3 -3.49618 | opp_overlap 68224, overlap 68224 GTTTGACAGAAGTAA TAAAAGGAGAGCA ACTG TGCTCTCCTGTTA ACCAATATATAAGGG TERM 83 68243 - 68224 - f 100 -12.2 -4.82756 | opp_overlap 68224, overlap 68219 ACAGAAGTAATAAAA GGAGAGCA ACTG TGCTCTCC TGTTAACCAATATAT TERM 84 68224 - 68243 + F 90 -12.2 -3.0395 | opp_overlap 68224 68219 ACAGAAGTAATAAAA GGAGAGCA ACTG TGCTCTCC TGTTAACCAATATAT cpdB 68271 - 70226 + | 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor TERM 85 70233 - 70256 + F 77 -8.8 -3.60884 | opp_overlap 70236, overlap 70234 70236 AAGAAATAATCTTAT AGACCTGTCC ATTC GGGCAGGTCG TTCTCATGTTTTGGC TERM 86 70234 - 70255 + F 89 -12.3 -2.75807 | opp_overlap 70236, overlap 70233 70236 AGAAATAATCTTATA GACCTGTCC ATTC GGGCAGGTC GTTCTCATGTTTTGG TERM 87 70236 - 70253 + F 73 -9.1 -2.91201 | opp_overlap 70236, overlap 70234 70233 AAATAATCTTATAGA CCTGTCC ATTC GGGCAGG TCGTTCTCATGTTTT TERM 88 71000 - 70980 - g 70 -2.5 -5.07652 | overlap 70983 GTTCTTAAAAGAAAA TAATCCATC ATT GAAGGATAA AGAAATTCAAATTAA PMI0046 70309 - 71085 + | lipoprotein PMI0047 71104 - 72726 + | secreted 5'-nucleotidase TERM 89 72776 - 72752 - T 79 -8 -4.07885 | gap 1, overlap 72729 72754 TACGCCTTGTGAAAA TA-GCACCTCT TACG AGAGGTGCGTA ACTAAATAAAGAGAG TERM 90 72773 - 72754 - T 95 -12.2 -3.63744 | overlap 72752 CGCCTTGTGAAAATA GCACCTCT TACG AGAGGTGC GTAACTAAATAAAGA TERM 91 72984 - 72966 - T 100 -14.6 -5.75342 | CGTGGGCAAAAAAAA GCCCACAG AGG CTGTGGGC AAGGAATGAAAATAA PMI0048 73638 - 73039 - | hypothetical protein sbcC 77493 - 73768 - | exonuclease TERM 92 74097 - 74081 - G 70 -3 -5.16237 | AAGCTGACTAAAAAA CTCTCT CCACC AGAAAG TGTACGTGTATCGCG TERM 93 74421 - 74437 + g 73 -8.7 -3.77464 | TAAATAGTGTTTCTT GCAACGC TTT GTGTTGC TTTGCTAAGTCGTCT TERM 94 76498 - 76521 + g 78 -2.5 -5.36364 | gap 1, overlap 76500 TTTTTTATTGATAGG TAGGCT-TTG TTGTT CAATAGCCTG TTTTTCTGTTTTTAA TERM 95 77056 - 77075 + g 84 -2.2 -5.85244 | gap 1 GAAGCGATCGAAATC TAATC-CGG TGA TCGAGATTA TTTTTTCTTTTACTT sbcD 78722 - 77490 - | exonuclease subunit D TERM 96 79410 - 79397 - g 73 -6.7 -4.22009 | ACCAGTCAAGATAAA CCCAT TGAT ATGGG GCCTACCGAATTTAA phoB 78944 - 79633 + | phosphate regulon transcriptional regulator (two-component response regulator) TERM 97 79679 - 79698 + G 73 -5.6 -4.59774 | opp_overlap 79669 79667 79681, overlap 79676 79681 AACGACTCTCATGGA AAGCCCTC GTGT GGGGGCTA TTTCTATTTTGTTTA TERM 98 79681 - 79696 + G 73 -8.2 -3.86421 | opp_overlap 79667 79681, overlap 79679 79676 CGACTCTCATGGAAA GCCCTC GTGT GGGGGC TATTTCTATTTTGTT TERM 99 79867 - 79877 + G 73 -6.8 -4.30057 | CCAGAAGGGAAAGGG GGCT GGG AGCC TATTTTTTATGGTAT TERM 100 80263 - 80273 + G 83 -3.2 -5.56568 | AATAAGTTAGAAAAT TCGC GAC GTGA TTTTTTTGCTAATGT TERM 101 80569 - 80556 - g 71 -3.9 -5.00467 | CCAAGAACAACAAAA TATCA TCTT TGATA TTGACCATAAATGGG TERM 102 80668 - 80649 - g 77 -8.6 -3.9398 | opp_overlap 80648 CTATAACGCCATAAA TCATACCC CTGA GGGTACGA CTATTCGCGTGAGTT phoR 79657 - 80949 + | phosphate regulon sensor protein (two-component histidine kinase) TERM 103 80976 - 81014 + F 100 -14.2 -4.95155 | TCCTTATTTTATTAG TACCTTTATTACCTATTT TTA AAAGAGGTGATAAAGGTA TTTTTGTCATATACC brnQ 81447 - 82784 + | branched-chain amino acid transport system II carrier protein TERM 104 82838 - 82807 - T 80 -7.4 -4.6038 | opp_overlap 82814, overlap 82809 82814 TACATTAAATTAAAA TCTAAAAGGGAAAC GGAA GTTTCCCTTTTTTA CGAAATTAAAGTAAG TERM 105 82836 - 82809 - T 77 -10 -2.60002 | opp_overlap 82814, overlap 82807 82814 CATTAAATTAAAATC TAAAAGGGAAAC GGAA GTTTCCCTTTTT TACGAAATTAAAGTA TERM 106 82831 - 82814 - T 93 -9.9 -4.4518 | opp_overlap 82814, overlap 82809 82807 AATTAAAATCTAAAA GGGAAAC GGAA GTTTCCC TTTTTTACGAAATTA TERM 107 82814 - 82831 + T 100 -9.9 -5.03145 | opp_overlap 82809 82807 82814 AATTAAAATCTAAAA GGGAAAC GGAA GTTTCCC TTTTTTACGAAATTA PMI0054 84130 - 82844 - | hypothetical protein PMI0055 84413 - 84120 - | hypothetical protein TERM 108 84305 - 84332 + g 81 -2.6 -5.69262 | overlap 84308 ATGCAGGGACGGTAC TGCGCTCGGCAA GATG TTCCCGAGACCA TTTTTCTTTTTCTCG TERM 109 84434 - 84492 + r 100 -19.4 -4.58395 | opp_overlap 84434 GCTCTAAACATAAAA TGGATACTATAATGTCCAATTATAGCAT GAT ATGGCATAATTGGATATTATAGTGTCCA TTTTTACAAGCTAAC TERM 110 84492 - 84434 - R 100 -17.2 -4.78848 | opp_overlap 84434 GCTCTAAACATAAAA TGGATACTATAATGTCCAATTATAGCAT GAT ATGGCATAATTGGATATTATAGTGTCCA TTTTTACAAGCTAAC PMI0056 85727 - 84801 - | hypothetical protein TERM 111 85036 - 85048 + g 70 -3.4 -4.87291 | TGGGATACATTGGGG CGAT AGAGG ATCG TTTTTAATTGGCCTG PMI0057 86674 - 85724 - | hypothetical protein TERM 112 85983 - 85995 + g 70 -3.4 -4.87291 | TGGGACACATTGGGG CGAT AGAGG ATCG TTTTTAATTGGCCTG TERM 113 87523 - 87539 + r 82 -9.5 -3.58037 | opp_overlap 87522 87521 TTGAGGCTCCAAAGG GTCATCA TAG TGATGAC TTTCCGCAATTAATG PMI0060 88538 - 87603 - | hypothetical protein TERM 114 87862 - 87874 + g 70 -3.4 -4.87291 | TGGGACACATTGGGG CGAT AGAGG ATCG TTTTTAATTGGCCTG PMI0061 89485 - 88535 - | hypothetical protein TERM 115 88794 - 88806 + g 70 -3.4 -4.87291 | TGGGACACATTGGGG CGAT AGAGG ATCG TTTTTAATTGGCCTG TERM 116 89151 - 89165 + g 75 -2.8 -5.22104 | opp_overlap 89151, overlap 89153 TACAATTCAATTAAT TTTGCT GAT AGCATA TTTTGTTCTTTTTTA TERM 117 89402 - 89418 + g 77 -9.5 -3.58037 | opp_overlap 89401 89400 TTGAGGTGCTAAAGG GTCATCA TAG TGATGAC TTTCCGCAATTAATG PMI0062 90433 - 89507 - | hypothetical protein TERM 118 89742 - 89754 + g 70 -3.4 -4.87291 | TGGGACACATTGGGG CGAT AGAGG ATCG TTTTTAATTGGCCTG PMI0063 91381 - 90455 - | hypothetical protein TERM 119 91012 - 91027 + g 81 -7.6 -4.52349 | ACCAACTTATCTTTT CCTTTC CAAA GAAAGG TTTATATTTATTTAT TERM 120 91298 - 91314 + g 71 -7.3 -3.93262 | overlap 91309 TTTTGGCGGTAAAGG GTCATCA TAG TGATGGC TTTCATCTATTAAAG TERM 121 92036 - 92024 - H 70 -4.1 -5.1244 | CTATTAATATAAAAA TTCGG AGT CCAAA ATAATGGCTTTTAAA PMI0064 92040 - 92522 + | hypothetical protein TERM 122 92664 - 92674 + T 81 -4 -5.57396 | TGTTTGCCCAATAGC TTCT ATG AGAA TTTTTTATTAATTAT PMI0065 93668 - 92694 - | subunit of oxidoreductase TERM 123 93393 - 93428 + g 72 -8.4 -3.53012 | opp_overlap 93395 TTTTTCATTGCCTAA CAGGGACAAGATGT TTTCTATC ACTTCTTGTTCCTG TTTGGCAAAAGAGGA PMI0066 94473 - 93676 - | oxidoreductase, cytochrome b subunit PMI0067 95141 - 94470 - | oxidoreductase, Fe-S subunit PMI0068 95924 - 95208 - | subunit of oxidoreductase PMI0069 98042 - 95940 - | aldehyde ferredoxin oxidoreductase PMI0070 98724 - 98095 - | oxidoreductase, Fe-S subunit TERM 124 98939 - 98977 + r 85 -8.4 -4.39998 | TTCGGTTTTTACGTA TTTTTCATTAACCATTAT GAT ATTGTGGTTATTGAAAAA TTTATTCTGTGACTG PMI0071 99317 - 99189 - | hypothetical protein TERM 125 99308 - 99280 - G 100 -9 -5.61596 | opp_overlap 99280 99284, overlap 99263 ATTTTTATAAAAAAA GAAACCTTGTCT AATAA AGAGAAGGTTTC TTTTGCCAATGGTAT TERM 126 99280 - 99308 + g 83 -9 -4.12456 | opp_overlap 99263 99280, overlap 99284 ATTTTTATAAAAAAA GAAACCTTGTCT AATAA AGAGAAGGTTTC TTTTGCCAATGGTAT ggt 101111 - 99339 - | gamma-glutamyltranspeptidase TERM 127 99494 - 99505 + g 76 -7.2 -4.17132 | opp_overlap 99490, overlap 99490 TAATCAATTCAGCCG CGCC CCAT GGCG TTTGTTCGACCATTT TERM 128 101353 - 101368 + r 85 -9 -4.11773 | opp_overlap 101353 AGTATTAATAAAAAA GCCTGT TTTC ACAGGC TTTTAGCAAATATTT TERM 129 101368 - 101353 - R 100 -9 -5.52023 | opp_overlap 101353 AGTATTAATAAAAAA GCCTGT TTTC ACAGGC TTTTAGCAAATATTT ahpC 102004 - 101402 - | alkyl hydroperoxide reductase TERM 130 102098 - 102111 + r 70 -4.5 -4.81249 | opp_overlap 102100 TATTTAGAGTAAATT TAGGG GATA CCCTG TTTTTAAATTTAGGG PMI0074 103002 - 102415 - | hypothetical protein TERM 131 103015 - 103037 + H 76 -7.1 -4.21438 | opp_overlap 103015 103034, overlap 103034 CATTGTACTATCATA GCGCTTTTT AAATA AAAAAGTGC TTCTTTGTTGCACTG TERM 132 103050 - 103034 - H 74 -2.1 -5.63517 | opp_overlap 103015 103034, overlap 103015 TTTTTAAATAAAAAA GTGCTTC TTT GTTGCAC TGATTAACATGCAGC TERM 133 103058 - 103083 + H 88 -6.9 -5.252 | gap 1, opp_overlap 103058, overlap 103061 103078 TGTTGCACTGATTAA CATGCAGCACTA GAC TAGTGC-GCCTG TTTTTTATGAAAGTA queA 103110 - 104183 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 104365 - 105507 + | queuine tRNA-ribosyltransferase yajC 105594 - 105929 + | preprotein translocase subunit TERM 134 106101 - 106071 - gf 100 -14.1 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGCGCGCGG GGAA CCGC-CGCCAATGA GCAAACACTGGATCA secD 105962 - 107809 + | protein-export membrane protein SecD secF 107775 - 108788 + | protein-export membrane protein SecF TERM 135 108848 - 108820 - f 100 -15.4 -3.70571 | opp_overlap 108820, overlap 108811 CATAAACATCGCAAA CACCCTGCCAGT TAATG ACTGACAGGGTG TTTTTTGTTCACTGA TERM 136 108820 - 108848 + F 100 -13.9 -5.4833 | opp_overlap 108820 108811 CATAAACATCGCAAA CACCCTGCCAGTT AAT GACTGACAGGGTG TTTTTTGTTCACTGA ribX 108907 - 109356 + | ATP-binding regulatory protein ribD 109413 - 110570 + | diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 137 110591 - 110622 + F 83 -10.3 -3.28304 | overlap 110586 110590 110587 110593 110594 GCAAATATGTGTGTC TATGGCGCTATTT GTAGTA AAATAGCGCCGTG TGTGTTATTCCCTGT TERM 138 110593 - 110620 + F 83 -10.7 -3.1991 | overlap 110586 110591 110590 110587 110594 AAATATGTGTGTCTA TGGCGCTATTT GTAGTA AAATAGCGCCG TGTGTGTTATTCCCT TERM 139 110594 - 110619 + F 87 -12 -2.51223 | overlap 110586 110593 110591 110590 110587 AATATGTGTGTCTAT GGCGCTATTT GTAGTA AAATAGCGCC GTGTGTGTTATTCCC TERM 140 110635 - 110647 + F 74 -7.7 -3.78934 | GTGTGTGTTATTCCC TGTCG TTA CGACA TTGTTATCAGCCAAC TERM 141 110669 - 110684 + F 71 -7.6 -3.42347 | opp_overlap 110669, overlap 110668 TCAGCCAACTAACTA CCTTGA TTTA TCAAGG ATTTTTGGCTCCTTT TERM 142 110763 - 110749 - f 100 -11.4 -4.44461 | AAGAATGTGATAAAA TCCGCG CCC CGCGGA TAGGAGAAAAAGGTA ribH 110783 - 111253 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 111282 - 111695 + | N utilization substance protein B TERM 143 111735 - 111751 + F 100 -10.8 -4.93877 | opp_overlap 111735 111730 AAATTAATAATCCAA GGCCGG TTACT CCGGCC TTTTATTTAATAAGC TERM 144 111751 - 111735 - f 85 -10.8 -3.31877 | opp_overlap 111735, overlap 111730 AAATTAATAATCCAA GGCCGG TTACT CCGGCC TTTTATTTAATAAGC thiL 111789 - 112769 + | thiamine-monophosphate kinase TERM 145 112807 - 112791 - T 100 -9.4 -4.99043 | TCGCTATAAACAAAA GGCGCT TAATG AGCGCC TCTGAAATCAAAATA phnA 113190 - 112855 - | hypothetical protein TERM 146 113558 - 113534 - R 74 -6.5 -4.38744 | overlap 113531 113535 ACTTAGATAAAATAA CTACTCTCTCT TTA AAAGAGAGTAT CAGTAATAATAGTGT TERM 147 113557 - 113535 - R 82 -10 -3.22162 | overlap 113534 113531 CTTAGATAAAATAAC TACTCTCTCT TTA AAAGAGAGTA TCAGTAATAATAGTG PMI0087 114279 - 114037 - | plasmid-associated protein TERM 148 114329 - 114285 - R 89 -11.8 -3.29649 | gap 1, opp_overlap 114300, overlap 114287 114288 114300 ACTGGATCATAGTAA TAGC-TCCTATAAAAACTGCC ATAT AGCAGTTTTTATAGGATACCA AATAGGTTGTGTGAA TERM 149 114327 - 114287 - R 90 -12.2 -3.214 | gap 1, opp_overlap 114300, overlap 114285 114288 114300 TGGATCATAGTAATA GC-TCCTATAAAAACTGCC ATAT AGCAGTTTTTATAGGATAC CAAATAGGTTGTGTG TERM 150 114325 - 114288 - R 100 -13.7 -2.52519 | opp_overlap 114300, overlap 114287 114285 114300 GGATCATAGTAATAG CTCCTATAAAAACTGCC ATAT AGCAGTTTTTATAGGAT ACCAAATAGGTTGTG TERM 151 114313 - 114300 - R 70 -4.5 -4.83615 | opp_overlap 114300, overlap 114288 114287 114285 TAGCTCCTATAAAAA CTGCC ATAT AGCAG TTTTTATAGGATACC TERM 152 114360 - 114332 - R 74 -7.6 -3.8766 | opp_overlap 114334 TTATAGGATACCAAA TAGGTTGTGT GAAATATAT ACACAACCTA TTAACCTATTAATGT rbsR 115389 - 114382 - | ribose operon repressor (LacI-family transcriptional regulator) rbsK 116320 - 115394 - | ribokinase TERM 153 116388 - 116357 - R 100 -13.9 -4.00124 | opp_overlap 116352 116349 116361 TAGTTTATAACGAAA CTAACCACGCAGT GAAAGT ACTACGTGGTTAG ATGGGTGATTATTTT rbsB 117287 - 116397 - | D-ribose ABC transporter, substrate-binding periplasmic protein TERM 154 116434 - 116444 + g 81 -6.8 -4.70879 | opp_overlap 116434 116432 AGCTCAACAGGAATA GTGG GAT CCAC TTTTTCCCCTTTCAG rbsC 118292 - 117327 - | ribose ABC transporter, permease protein rbsA 119802 - 118294 - | ribose ABC transporter, ATP-binding protein rbsD 120229 - 119810 - | high affinity ribose transport protein TERM 155 120095 - 120081 - G 75 -10 -3.0464 | overlap 120070 120080 AACACTGACATAAAG TCAGGG ATC CCCTGA GTTAAAGCAAGATCG TERM 156 120241 - 120258 + r 84 -9.9 -3.37796 | TCATCTTTGCCTCCT CAGCGAA ACGT TTCGCTG TTCTACATAGTAGGA TERM 157 120561 - 120529 - R 82 -9.9 -3.19157 | opp_overlap 120531, overlap 120520 120531 TATTAACCTTATCAA TAGTCTCTCCGGCTT TAC AAGCAAGAGAGACTT TTGAAATATTATCTC TERM 158 120531 - 120559 + r 95 -10.3 -4.20712 | opp_overlap 120531 120529 120520 TTAACCTTATCAATA GTCTCTCCGGCTT TAC AAGCAAGAGAGAC TTTTGAAATATTATC TERM 159 120559 - 120531 - R 90 -12.5 -3.15574 | opp_overlap 120531, overlap 120529 120520 TTAACCTTATCAATA GTCTCTCCGGCTT TAC AAGCAAGAGAGAC TTTTGAAATATTATC dxs 122444 - 120570 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 160 122481 - 122497 + r 100 -8 -5.84011 | opp_overlap 122481 CTTGTAATAGGGAAA GAGCAG GTAAG CTGCTC TTTTTATTTTTTATT TERM 161 122497 - 122481 - R 75 -8 -3.76373 | opp_overlap 122481 CTTGTAATAGGGAAA GAGCAG GTAAG CTGCTC TTTTTATTTTTTATT ispA 123434 - 122511 - | geranyltranstransferase xseB 123743 - 123435 - | exodeoxyribonuclease VII small subunit TERM 162 123489 - 123518 + g 73 -9.5 -3.12257 | gap 1, opp_overlap 123492, overlap 123492 ATCATCCTCTTTGAG TAAGATGC-GAACA CGT TGTTCAGCATCTTG TAATGTTTTTTGTCC TERM 163 123492 - 123515 + g 76 -9 -3.66574 | gap 1, opp_overlap 123492, overlap 123489 ATCCTCTTTGAGTAA GATGC-GAACA CGT TGTTCAGCATC TTGTAATGTTTTTTG TERM 164 123515 - 123492 - G 70 -9 -3.14211 | gap 1, opp_overlap 123492 123489 ATCCTCTTTGAGTAA GATGC-GAACA CGT TGTTCAGCATC TTGTAATGTTTTTTG TERM 165 123561 - 123547 - G 73 -8.6 -3.70149 | CCCACACGAGCTAAA CGAACA CCA TGTTCG AACTCATTAAGGGCC TERM 166 124235 - 124214 - g 76 -4.4 -5.09259 | overlap 124209 TAGTTGAAAACAAAA CGTTTTGC GTAAGA GCTAAACG CCGTGGTAAACACAG TERM 167 125182 - 125160 - g 70 -2.7 -5.01823 | gap 1, overlap 125164 AGAAGAACAAGAAAA CTCACCTCTA AAAT TAGAGG-GTG TAGATGTTAAAGAAT thiI 123898 - 125349 + | thiamine biosynthesis protein PMI0099 125836 - 125729 - | hypothetical protein PMI0100 126423 - 125842 - | hypothetical protein thiJ 127211 - 126594 - | DJ-1/PfpI family protein panE 128103 - 127180 - | 2-dehydropantoate 2-reductase PMI0103 128357 - 128848 + | hypothetical protein TERM 168 128891 - 128867 - T 81 -4.3 -5.42265 | opp_overlap 128867 128888 CGAAAGTATAAAAAA TGCGCTG TTTGGTTTATT CAGCGCA TTTACAGGGTATATG PMI0104 130281 - 128911 - | MFS-family transporter TERM 169 130062 - 130023 - G 83 -5.2 -5.31855 | gap 1, opp_overlap 130026, overlap 130026 130030 TACCAACAATAAAAA TAATTAAGCCGAAAA-CAA TCA TTGATTTTCGGCCAAATTT GTCTGAGAAAAATCC TERM 170 130059 - 130026 - G 81 -6.9 -4.72127 | gap 1, opp_overlap 130026, overlap 130023 130030 CAACAATAAAAATAA TTAAGCCGAAAA-CAA TCA TTGATTTTCGGCCAAA TTTGTCTGAGAAAAA TERM 171 130055 - 130030 - G 79 -9.9 -3.78633 | gap 1, opp_overlap 130026, overlap 130026 130023 AATAAAAATAATTAA GCCGAAAA-CAA TCA TTGATTTTCGGC CAAATTTGTCTGAGA TERM 172 130091 - 130075 - G 74 -5.2 -4.82901 | TTTGTCTGAGAAAAA TCCAAA AGGAA TTTGGA AGATTGCTTGAGTTA TERM 173 130210 - 130198 - G 75 -7.7 -4.02022 | GGGAAGTACCATAAA CATGC CAA GCATG CGAAGAGAGAAAACA TERM 174 130400 - 130433 + r 76 -5.3 -5.09426 | opp_overlap 130406, overlap 130402 ATGTGGCATTTAAAC TAAAAATGCCAGTCA TGAT TGACTGGCATTAGCA TTTTTTGCAATTGAA TERM 175 130427 - 130406 - R 100 -13.1 -5.00138 | opp_overlap 130402 130400 CATTTAAACTAAAAA TGCCAGTCA TGAT TGACTGGCA TTAGCATTTTTTGCA cyoE 131339 - 130455 - | protoheme IX farnesyltransferase TERM 176 131275 - 131229 - G 81 -7.3 -4.59109 | gap 1, overlap 131243 TAGAGTCGCGAAAAA TAGGGGGTAGTCAATCTCGCCT TTTG AGGCGAGAAGGAA-ACCACCTA TCACAGAAATTAAAT TERM 177 131262 - 131243 - G 82 -12.2 -3.05935 | overlap 131229 ATAGGGGGTAGTCAA TCTCGCCT TTTG AGGCGAGA AGGAAACCACCTATC cyoD 131683 - 131351 - | cytochrome O ubiquinol oxidase protein cyoC 132294 - 131683 - | cytochrome O ubiquinol oxidase subunit III TERM 178 132240 - 132271 + g 71 -6.6 -3.98804 | gap 1, overlap 132245 132246 TCGTCGCTCCTGCAT CGTG-GTGCCCATGA TGC TCATGGGCGTTTGCG TTATTTAAAGTTTGA TERM 179 132245 - 132265 + g 91 -11.9 -3.89435 | overlap 132240 132246 GCTCCTGCATCGTGG TGCCCATGA TGC TCATGGGCG TTTGCGTTATTTAAA TERM 180 132246 - 132264 + g 91 -13.2 -2.92938 | overlap 132245 132240 CTCCTGCATCGTGGT GCCCATGA TGC TCATGGGC GTTTGCGTTATTTAA cyoB 134276 - 132294 - | cytochrome O ubiquinol oxidase subunit I TERM 181 132548 - 132566 + g 76 -2.3 -5.40464 | GTTCATATTTTGCAG GGCGCTG ATAAG CAGTACC TTTTTCTTTCTGATC TERM 182 134298 - 134317 + r 71 -7.8 -3.4382 | ATTCCTCTGCTCCTG CATGTGCC GCGT GGCTCATG TTCATATTCATTGTT cyoA 135231 - 134281 - | cytochrome O ubiquinol oxidase subunit II TERM 183 135704 - 135681 - R 83 -8.2 -4.2687 | GCTAAAAATGACAAA CAGCGAATAA AAAG TGATTCGCTG TCACAAAAATTAACA PMI0109 136489 - 135728 - | hypothetical protein dbpA 136845 - 138218 + | ATP-independent RNA helicase TERM 184 138291 - 138274 - T 100 -11.3 -5.12474 | opp_overlap 138274 GATAACATAGAAAAA GGACAGC CTAG GCTGTCC TTGAATAGATGATTG TERM 185 138274 - 138291 + T 87 -11.3 -3.0894 | opp_overlap 138274 GATAACATAGAAAAA GGACAGC CTAG GCTGTCC TTGAATAGATGATTG ampG 139838 - 138318 - | Beta-lactamase induction signal transducer (MFS-family transporter) PMI0112 140474 - 139896 - | lipoprotein TERM 186 140901 - 140913 + G 70 -9.1 -3.09732 | overlap 140900 CATAATGTACCTGCA GGCTC GGA GAGCC ATTTTAAAGTCGTTA bolA 140805 - 141119 + | BolA protein TERM 187 141531 - 141520 - g 75 -5.8 -4.70659 | GCTGATATCCAAAAA GCTG TAGA CAGC GAACTGAAAAAAGCT tig 141442 - 142746 + | Trigger factor TERM 188 142798 - 142779 - f 100 -13.6 -4.8622 | opp_overlap 142779 GGTTTTAAGCAAAAA CCCGTGGT AAAA ACCACGGG TTTTTTTCAGTTTGT TERM 189 142779 - 142798 + F 100 -13.6 -5.59564 | opp_overlap 142779 GGTTTTAAGCAAAAA CCCGTGGT AAAA ACCACGGG TTTTTTTCAGTTTGT clpP 143003 - 143626 + | ATP-dependent Clp protease proteolytic subunit clpX 143771 - 145042 + | ATP-dependent Clp protease ATP-binding subunit TERM 190 145133 - 145160 + F 100 -10 -5.52384 | opp_overlap 145138, overlap 145138 GCGTGCCAACGCAAT AAAAATGAGGGA ATTT TCCCTCATTTTG TTTTTTTAATAGGGA TERM 191 145138 - 145155 + F 100 -9.9 -5.57888 | opp_overlap 145138, overlap 145133 CCAACGCAATAAAAA TGAGGGA ATTT TCCCTCA TTTTGTTTTTTTAAT TERM 192 145155 - 145138 - f 100 -9.9 -5.13741 | opp_overlap 145133 145138 CCAACGCAATAAAAA TGAGGGA ATTT TCCCTCA TTTTGTTTTTTTAAT TERM 193 147032 - 147018 - g 70 -5.8 -4.33165 | opp_overlap 147018 TGAAATCGATGAAAA TAATCT GAA AGATTA TTTAGGTGTACGTAA lon 145300 - 147654 + | ATP-dependent protease La TERM 194 147697 - 147726 + F 81 -2.9 -5.75478 | gap 1 TTTCACTAAAAAAAA GGCTGGATAAGC AATAAAA GCTTG-CCAGTC TTTTTTTGTGTCGTT hupB 147876 - 148151 + | DNA-binding protein HU-beta TERM 195 148253 - 148233 - f 93 -9.7 -4.70887 | opp_overlap 148233 CGATTAAGAAATAAA GCGCATCTT TAA AGGATGCGC TTTTCTTTTTTACCA TERM 196 148233 - 148253 + F 100 -11.9 -5.42198 | opp_overlap 148233 CGATTAAGAAATAAA GCGCATCTT TAA AGGATGCGC TTTTCTTTTTTACCA TERM 197 148385 - 148369 - f 83 -9.5 -3.77906 | opp_overlap 148368 148371 148380, overlap 148362 148379 AACTGAAATAGACAA CATGAGA GCA TCTCATG GTTAGCTAAAGACTT TERM 198 148496 - 148512 + F 88 -8.7 -4.4261 | opp_overlap 148495 GCTATTTCTAAGGAT TGTCGCG TGT TGCGACA TTTTGATATTAAGCC TERM 199 150117 - 150107 - g 79 -5.4 -4.93696 | GTCAAACAGCAAAAA GCTT CTC AAGC GATGAATGCGCAAGC ppiD 148619 - 150496 + | peptidyl-prolyl cis-trans isomerase D TERM 200 150544 - 150517 - f 81 -10 -3.09015 | opp_overlap 150523 150542, overlap 150523 CTTAGATTGATTGAA TAAAAACCCAGT TTCG ACTGGGTTTTTT TATGGCTAAAATTAT TERM 201 150538 - 150523 - f 95 -9 -5.10461 | opp_overlap 150523, overlap 150517 TTGATTGAATAAAAA CCCAGT TTCG ACTGGG TTTTTTTATGGCTAA TERM 202 150523 - 150538 + F 100 -9 -5.64274 | opp_overlap 150523 150517 TTGATTGAATAAAAA CCCAGT TTCG ACTGGG TTTTTTTATGGCTAA PMI0120 150751 - 151125 + | competence protein TERM 203 151132 - 151180 + F 100 -12.7 -4.13591 | opp_overlap 151137 151139, overlap 151137 ATCAACTAATTACTC GATAATACTGTACCCCTTTTT TGTGATC AAAAAGGGGTACAGAATTGCC TTTATATAATATTAA TERM 204 151137 - 151175 + F 100 -13.4 -3.36096 | opp_overlap 151137 151139, overlap 151132 CTAATTACTCGATAA TACTGTACCCCTTTTT TGTGATC AAAAAGGGGTACAGAA TTGCCTTTATATAAT TERM 205 151175 - 151137 - f 100 -13.4 -3.35015 | opp_overlap 151137 151132, overlap 151139 CTAATTACTCGATAA TACTGTACCCCTTTTT TGTGATC AAAAAGGGGTACAGAA TTGCCTTTATATAAT TERM 206 151173 - 151139 - f 100 -16 -3.24137 | opp_overlap 151137 151132, overlap 151137 AATTACTCGATAATA CTGTACCCCTTTTT TGTGATC AAAAAGGGGTACAG AATTGCCTTTATATA PMI0121 151338 - 151745 + | hypothetical protein TERM 207 151988 - 151958 - T 81 -9 -3.88232 | TTTGGTATAGAATAA TTCCCCGCTCTG TTGTTTT CAGGGCGGAGAA AATCACAGGGGAAAA PMI0122 152834 - 152136 - | hypothetical protein TERM 208 152162 - 152178 + g 83 -6.5 -5.1523 | overlap 152175 CAACTTTATTTTTCA TGGCGTC CAT GACGGCA TTTTTGTCTTGTAAA PMI0123 152992 - 153453 + | AsnC-family transcriptional regulator TERM 209 153441 - 153431 - f 77 -8.2 -3.80929 | AAATTAAATACACAA CGGC AAT GCCG ATACCTGAATAAGAT TERM 210 154647 - 154661 + G 88 -11.4 -3.57918 | opp_overlap 154636 AAAAGCACTTTGTTA GCGCTG ATC CAGCGC TTATATGATGTCAGT mdlA 153510 - 155255 + | efflux ABC transporter, ATP-binding membrane protein mdlB 155242 - 157029 + | efflux ABC transporter, ATP-binding membrane protein TERM 211 157056 - 157071 + F 100 -10.4 -5.4833 | TTCCATTCATCCTAA CCCAGC CAAT GCTGGG TTTTTTATTGCCTCA glnK 157248 - 157586 + | nitrogen regulatory protein P-II TERM 212 157593 - 157618 + F 75 -2.7 -5.53288 | GCCTTGTAGAGGAGC TAACAAATGAA ACGA TTTATTAGTTA TTTTTTTACGTTAGC amtB 157599 - 158897 + | probable ammonium transporter TERM 213 158903 - 158929 + T 85 -10.3 -3.38118 | gap 1, opp_overlap 158898, overlap 158905 CGAGCAGTAATGGTC TATT-CCCCCTC AACT GAGGGGGGAATA TTCTCACTGCGTTAT TERM 214 158905 - 158926 + T 89 -12.3 -2.54919 | opp_overlap 158898, overlap 158903 AGCAGTAATGGTCTA TTCCCCCTC AACT GAGGGGGGA ATATTCTCACTGCGT tesB 159816 - 158941 - | acyl-CoA thioesterase TERM 215 160454 - 160478 + r 77 -10.1 -2.72012 | overlap 160451 GTAAGAATTATGCCG TCATGCCGT TATAAGC ACGGCATGA TAGTGTGTAATCATT PMI0129 160811 - 160608 - | regulatory protein PMI0130 161219 - 160857 - | hypothetical protein TERM 216 161832 - 161806 - R 100 -16 -5.24291 | opp_overlap 161812 161829, overlap 161812 AAAATTAAAATAAAA CAAAAAGGCCGC TAA GCGACCTTTTTG ATGGGTAGCCAACAA TERM 217 161812 - 161826 + r 83 -7 -4.7497 | opp_overlap 161806 161812 AAAATAAAACAAAAA GGCCGC TAA GCGACC TTTTTGATGGGTAGC TERM 218 161826 - 161812 - R 100 -9.2 -5.70761 | opp_overlap 161812, overlap 161806 AAAATAAAACAAAAA GGCCGC TAA GCGACC TTTTTGATGGGTAGC TERM 219 161840 - 161858 + r 73 -8.9 -2.85999 | overlap 161829 CCTTTTTGATGGGTA GCCAACA AATTA TGTTGGC TGTGGTATAGCATAA acrB 165035 - 161877 - | inner membrane rnd family protein acrb TERM 220 163461 - 163471 + g 70 -3.2 -5.00616 | overlap 163459 AACACTGTCTGTATA GTGG TGA CTAC TTTTTTCAAAAACGC TERM 221 164185 - 164171 - G 70 -8.6 -3.37245 | CCAGTTTAATACCAA TACCTG CTG CAGGTA AGCCATTAAAGCGAG TERM 222 164492 - 164480 - G 73 -7.7 -3.93288 | opp_overlap 164480 CTGGATCTAACCAAA TACGC ATC GCGTA TTGTGTACCAAATAA acrA 166240 - 165050 - | multidrug efflux protein TERM 223 166211 - 166229 + g 83 -6 -5.0538 | AAGCACTAACAGAGC CAGAGG CAAAACC CCTCTG TTTTTTCGCATAAGA TERM 224 166774 - 166796 + G 75 -7.8 -4.0827 | GAATTATGTGCAGCC GATTACTCTA GAA TAGAGCAATC TTTATCTCGCTGTAT acrR 166366 - 167010 + | acrAB operon repressor (tetR-family transcriptional regulator) PMI0134 167039 - 167392 + | cytoplasmic sulphur reductase TERM 225 168200 - 168179 - g 71 -3.7 -4.89477 | TTTGCAACAACAAAA CAGTTTTCA AAAA CGAACACTG CAATCTAATGTACAG TERM 226 168442 - 168426 - g 80 -2.2 -5.5353 | opp_overlap 168427, overlap 168427 GATATTAATAAAAAA CTCAGC GATAA GCTGAT TATTACTACACAAAA TERM 227 169526 - 169565 + G 80 -2.3 -5.5353 | gap 1, opp_overlap 169511, overlap 169511 169508 CCCATTATTGTTAGT GGGTGATGTGATTGGTCA ATTAG TGA-CAATTATTTCACTC TTTTTTATTAGTCTG kefA 167517 - 170945 + | potassium efflux protein PMI0136 171113 - 170958 - | hypothetical protein priC 171667 - 171125 - | primosomal replication protein N'' apt 171805 - 172356 + | adenine phosphoribosyltransferase TERM 228 173815 - 173777 - g 95 -13.2 -3.47403 | overlap 173779 TCAAGTGAGAAGCAA TATGGCAACGGCGACACC CAA AGTATCACCGTCGCCAGA AAACAGTGCTGCATT TERM 229 173813 - 173779 - g 100 -15.8 -3.30441 | overlap 173777 AAGTGAGAAGCAATA TGGCAACGGCGACACC CAA AGTATCACCGTCGCCA GAAAACAGTGCTGCA dnaX 172584 - 174560 + | DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) TERM 230 174688 - 174676 - g 79 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GCAAA TGCA AGAAGAGATCGCTAA PMI0140 174615 - 174944 + | hypothetical protein recR 174944 - 175549 + | recombination protein TERM 231 175600 - 175573 - f 84 -5.6 -5.49234 | opp_overlap 175573 AGATTTAATAAAAAA GCACCTTGTTAT CAAT ATAATGAGGTGC TTTTTTTTTGATTTT TERM 232 175573 - 175600 + F 100 -10 -6.31682 | opp_overlap 175573 AGATTTAATAAAAAA GCACCTTGTTAT CAAT ATAATGAGGTGC TTTTTTTTTGATTTT TERM 233 175699 - 175721 + F 72 -2.8 -5.42131 | opp_overlap 175713, overlap 175700 175713 TGTGATCTAAATCTC CCTTTTTTGT ATA ATAAAAAAGA TTTTTTATGTAATTA cstA 176000 - 178150 + | carbon starvation protein TERM 234 178201 - 178173 - f 100 -15.3 -4.66953 | overlap 178164 178174 CGAATAGGCTAAAAA CCCCCGCACTCAC TTA ATGAGTGCGGGGC TTAGGAGAAACTTAT TERM 235 178200 - 178174 - f 100 -18.8 -3.39449 | overlap 178173 GAATAGGCTAAAAAC CCCCGCACTCAC TTA ATGAGTGCGGGG CTTAGGAGAAACTTA PMI0143 178215 - 178421 + | hypothetical protein PMI0144 178444 - 179421 + | ATP-binding protein TERM 236 179547 - 179572 + T 100 -14.9 -5.9873 | TAGGATCTTATGTTT CACCCCATAAT AACC ATTATGGGGTG TTTTTTTTATACTAA PMI0145 180910 - 179588 - | hypothetical protein TERM 237 179771 - 179753 - G 73 -9.6 -3.15663 | opp_overlap 179753 179752, overlap 179755 ATCTAGCGCCATTAA TACCGCTT TAT AAGCGGCA CTTGCTCCTGTCGAC TERM 238 179769 - 179755 - G 75 -10 -3.14051 | opp_overlap 179753 179752, overlap 179753 CTAGCGCCATTAATA CCGCTT TAT AAGCGG CACTTGCTCCTGTCG TERM 239 181205 - 181179 - R 100 -11.8 -5.73978 | opp_overlap 181179 181182 ATTATAAATAAAAAA CAATAGAATGAA TGA CTCATTCTATTG TTAGTATAATATCAT TERM 240 181179 - 181205 + r 85 -11.1 -3.31537 | opp_overlap 181179, overlap 181182 ATTATAAATAAAAAA CAATAGAATGA ATGAC TCATTCTATTG TTAGTATAATATCAT TERM 241 181493 - 181524 + r 80 -9.5 -3.41693 | opp_overlap 181494, overlap 181494 GGTGAATATTTATAA ATTGCCTGAAGCA AATAAA TGCTTCAGGCGAG TTACTTAATAATAAA TERM 242 181523 - 181494 - R 93 -10.8 -3.9777 | opp_overlap 181493 181494 GTGAATATTTATAAA TTGCCTGAAGCA AATAAA TGCTTCAGGCGA GTTACTTAATAATAA TERM 243 181494 - 181523 + r 95 -13 -2.64695 | opp_overlap 181494, overlap 181493 GTGAATATTTATAAA TTGCCTGAAGCA AATAAA TGCTTCAGGCGA GTTACTTAATAATAA PMI0146 182896 - 181529 - | C4-dicarboxylate transporter pepT 184146 - 182893 - | peptidase T TERM 244 183137 - 183151 + g 76 -7.2 -4.21936 | opp_overlap 183125 183132 183137 183135 GCATCAATAGCAATA TCGATA GGA TATCGA TTTTCACCTTGTAGA TERM 245 184314 - 184349 + H 70 -7.2 -3.68378 | overlap 184311 184312 TGTTTAATTTTTGTT TTTTCATTATTAAAAA ACTG TTTTTAATTATGAAGA TATTTTAAAGTATAA PMI0148 184549 - 185190 + | hypothetical protein PMI0149 186654 - 185314 - | drug/sodium antiporter TERM 246 186639 - 186624 - G 74 -4 -5.16572 | gap 1, overlap 186625 AGCTAAGGGAAAAAA GTGAGCG ATC CGCT-AC ATCAGATTGATGCAT PMI0150 186853 - 187752 + | oxidoreductase TERM 247 187802 - 187778 - T 100 -15.9 -4.86731 | TTCTTGCAAATAAAA TATTGCCCACA TGA TGTGGGCAATA GGATCAACGCTTAGG PMI0151 188664 - 187837 - | hypothetical protein PMI0152 189892 - 188681 - | hypothetical protein TERM 248 189757 - 189783 + g 79 -8.8 -4.07568 | overlap 189759 CTTCTCTTTCTAATG CTGTAGGTTTGG TTG TCAAATCTACGG TTTTGACAGGAAGGC TERM 249 189759 - 189802 + g 86 -2.4 -5.87996 | overlap 189757 189790 TCTCTTTCTAATGCT GTAGGTTTGGTTGTCAAATC TACG GTTTTGACAGGAAGGCCTGC TTTTTTTATTAATTC TERM 250 189977 - 189992 + H 87 -7.6 -4.8855 | opp_overlap 189943 189940 ATAATAGCATTATTT TGAGAC CCAT GTCTCA TTATTTTTATTTTTT PMI0153 190128 - 190763 + | TetR-family transcriptional regulator PMI0154 190827 - 191459 + | DNA-binding protein TERM 251 191549 - 191504 - f 72 -8.7 -3.11182 | opp_overlap 191505 191506 191518, overlap 191518 GCGGAATACAAATCA TTAAACTAAAAAAAGATATCA TTTT TGATATCTTTTTTTATTTCTA TTTTAAATTTAATGT TERM 252 191505 - 191549 + F 85 -8.4 -4.38313 | gap 1, opp_overlap 191504 191518, overlap 191506 191518 CGGAATACAAATCAT TA-AACTAAAAAAAGATATCA TTTT TGATATCTTTTTTTATTTCTA TTTTAAATTTAATGT TERM 253 191506 - 191547 + F 81 -9.1 -3.78629 | opp_overlap 191504 191518, overlap 191505 191518 GGAATACAAATCATT AAACTAAAAAAAGATATCA TTTT TGATATCTTTTTTTATTTC TATTTTAAATTTAAT TERM 254 191518 - 191535 + F 100 -7.1 -6.04953 | opp_overlap 191504 191518, overlap 191506 191505 ATTAAACTAAAAAAA GATATCA TTTT TGATATC TTTTTTTATTTCTAT TERM 255 191535 - 191518 - f 100 -7.1 -5.73563 | opp_overlap 191518 191506 191505, overlap 191504 ATTAAACTAAAAAAA GATATCA TTTT TGATATC TTTTTTTATTTCTAT TERM 256 192494 - 192481 - g 71 -3.9 -4.85618 | opp_overlap 192473, overlap 192473 192469 AAATAATGAATAAAA TTCTT TATG AAGAA AGTATAATGGGTGAA PMI0155 191673 - 193460 + | hypothetical protein TERM 257 193493 - 193467 - T 93 -9.8 -4.56133 | opp_overlap 193465 193461 193471, overlap 193471 193488 TCTGAATAAGGAAAA TAAATATTTTAT AGT ATAAAATATTTA TAATACTTTGTTTAA TERM 258 193489 - 193471 - T 80 -6.2 -4.81843 | opp_overlap 193465 193461 193471, overlap 193467 193488 AATAAGGAAAATAAA TATTTTAT AGT ATAAAATA TTTATAATACTTTGT PMI0156 193901 - 193491 - | acetyltransferase TERM 259 193596 - 193556 - G 77 -6.2 -4.59853 | overlap 193557 193564 CTAAGGTGCCAAAAA CTTCAAATCCCTGCTTTT GATAA AAAGGCAGGGCTTGAAAG CTAAAAGTATCCACC PMI0157 194015 - 195055 + | membrane-associated ammonia monooxygenase TERM 260 195134 - 195094 - T 93 -9.9 -4.4458 | opp_overlap 195101, overlap 195096 195101 GACAGATATAATAAA TTGAAAAGCCACTGTATCA GTT TGATAGAGTGGCTTTTTTA TACAATTAATAGTTT TERM 261 195132 - 195096 - T 89 -12.5 -2.54314 | opp_overlap 195101, overlap 195094 195101 CAGATATAATAAATT GAAAAGCCACTGTATCA GTT TGATAGAGTGGCTTTTT TATACAATTAATAGT TERM 262 195127 - 195101 - T 100 -12.4 -4.43755 | opp_overlap 195101, overlap 195096 195094 ATAATAAATTGAAAA GCCACTGTATCA GTT TGATAGAGTGGC TTTTTTATACAATTA TERM 263 195101 - 195127 + T 100 -12.4 -5.27923 | opp_overlap 195101 195096 195094 ATAATAAATTGAAAA GCCACTGTATCA GTT TGATAGAGTGGC TTTTTTATACAATTA PMI0158 195502 - 195140 - | hypothetical protein cueO 195703 - 197283 + | copper efflux oxidase TERM 264 197572 - 197586 + G 79 -5.8 -4.84017 | TCTTAATTGGCTTAT TAAAAG GCT CTTTTA TTTTTATGGCGGATT hpt 197442 - 197984 + | hypoxanthine phosphoribosyltransferase TERM 265 198028 - 198015 - T 100 -9.5 -5.21709 | opp_overlap 198015 TCGTATATTAAAAAA CCCGC TTTG GCGGG TTTAATATTAGAAAA TERM 266 198015 - 198028 + T 83 -9.5 -3.92324 | opp_overlap 198015 TCGTATATTAAAAAA CCCGC TTTG GCGGG TTTAATATTAGAAAA can 198697 - 198044 - | carbonic anhydrase TERM 267 199194 - 199223 + H 70 -3.8 -5.10208 | gap 1, opp_overlap 199200, overlap 199200 ATTGCTATAAAACAG GCTAAATAATAAC ATTTA GTTATTATT-GGC TTTTTATTGAGATTA TERM 268 200062 - 200076 + G 77 -6.4 -4.60924 | GATATTGAATTACGT CGTTCA ATG TGGACG TTTTTACAACATTTA PMI0162 199546 - 200487 + | ABC transporter, ATP-binding protein PMI0163 200484 - 201254 + | ABC transporter, membrane protein TERM 269 201291 - 201316 + F 100 -7.6 -5.81412 | opp_overlap 201286 201291 TAATAAAAATTAAAA TCGGTGTCTG CAACAA CAGATGCCGA TTTTTTTTAGCTAAA TERM 270 201394 - 201415 + F 72 -8.9 -2.65532 | opp_overlap 201412, overlap 201391 201390 AACAAGTTTAATTTC TTTGTTTAG TATA CTAAACAAA TAACTTTGGGATGGT PMI0164 201444 - 202673 + | MFS-family transporter PMI0165 202762 - 202944 + | hypothetical protein PMI0166 204001 - 203036 - | membrane-associated peptidase TERM 271 203111 - 203101 - G 72 -3.2 -5.0133 | GATGGGTTGAAAAAA GAGA GTC TCCC TTATTAAAAATAAAG PMI0167 204621 - 204061 - | hypothetical protein TERM 272 204809 - 204790 - R 100 -12.2 -5.37345 | overlap 204802 TTGAAGTATAAAAAA GCCCCAAA TAAA TTTGGGGC AAAATAAATAGGACT PMI0168 205657 - 204845 - | anaerobic dimethyl sulfoxide reductase subunit PMI0169 206211 - 205660 - | anaerobic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) PMI0170 208550 - 206214 - | anaerobic dimethyl sulfoxide reductase, molybdopterin-binding subunit PMI0171 208781 - 209470 + | regulatory protein TERM 273 209517 - 209493 - T 86 -10.2 -3.74519 | opp_overlap 209493 AATATTTTTATCAAA TACGTTTACT GGAAA AGTAAACGTA TTTGAAAATAGCAAA TERM 274 209493 - 209517 + T 86 -10.2 -3.57144 | opp_overlap 209493 AATATTTTTATCAAA TACGTTTACT GGAAA AGTAAACGTA TTTGAAAATAGCAAA PMI0172 210800 - 209535 - | Dyp-type peroxidase TERM 275 210653 - 210673 + g 72 -3.4 -5.09225 | gap 1, opp_overlap 210656, overlap 210656 TAGCACGTTGATAAC G-AAGTGTT GGTG AACACTTGC TTTTTTCGATGGCAT PMI0173 211713 - 210790 - | hypothetical protein PMI0174 212539 - 211703 - | hypothetical protein PMI0175 212889 - 212542 - | hypothetical protein TERM 276 212940 - 212917 - R 88 -11.8 -2.89379 | opp_overlap 212915, overlap 212919 212921 TAACAAAACAGAGGA GATAGCCCTA TACA CAGGGCTATC AATAATTAAGCTAAT TERM 277 212938 - 212919 - R 71 -8.6 -2.97662 | opp_overlap 212915, overlap 212917 212921 ACAAAACAGAGGAGA TAGCCCTA TACA CAGGGCTA TCAATAATTAAGCTA PMI0176 213512 - 212955 - | hypothetical protein PMI0178 214455 - 214907 + | membrane protein PMI0179 215091 - 214900 - | hypothetical protein PMI0180 215590 - 215102 - | hypothetical protein PMI0181 215845 - 215645 - | hypothetical protein TERM 278 215955 - 215926 - R 74 -2.3 -5.52986 | gap 1, opp_overlap 215934, overlap 215930 215931 ATTTTAGCAAAAAAA TAACCTAATGACTC AAT GAGGCATTA-ATTA AATTGGAGCAAAACG TERM 279 215964 - 215985 + r 72 -2.4 -5.48063 | gap 1 TTAATTAAATTGGAG CAAAAC-GA CATTA TCTGTTTTG TTTTTTCTGTTGAAT PMI0182 216475 - 216179 - | transcriptional regulator TERM 280 216878 - 216833 - H 79 -10.1 -2.80816 | gap 1, opp_overlap 216835 CTTTGACTGATTACA CTCAAAAATAGGC-GTTATATA TTA TTTATAACAGACTATTTTTGAG TTTTTTTGTCAGGTC TERM 281 217522 - 217512 - g 75 -5.4 -4.78237 | TATTGCAGAACAAAA TGTG ATC CACA CTAGGTTACCGCGAG gsp 217066 - 218943 + | bifunctional glutathionylspermidine synthetase/amidase [includes: glutathionylspermidine synthase and glutathionylspermidine amidase TERM 282 218970 - 218996 + T 100 -12.4 -5.86976 | opp_overlap 218970 TCATCCAATGAGTAA GAGATCGGCTTA GAT TAAACCGATCTC TTTTTTATTTTGTCA TERM 283 218996 - 218970 - T 100 -14.6 -3.2827 | opp_overlap 218970 TCATCCAATGAGTAA GAGATCGGCTTA GAT TAAACCGATCTC TTTTTTATTTTGTCA dsdC 219958 - 219014 - | D-serine deaminase activator (LysR-family transcriptional regulator) dsdX 220180 - 221517 + | DsdX permease dsdA 221524 - 222858 + | D-serine dehydratase TERM 284 223018 - 222998 - T 100 -16.9 -5.73339 | ATAACGATAAAAAAA GAGGCACCC ATT GGGTGCCTC ACTCACTAAAATAAA TERM 285 223068 - 223054 - T 70 -6.4 -4.20368 | opp_overlap 223058, overlap 223057 TTATTCTAAGATAAA CATCCC ATA AGGATG GATTTGTAGATAATA afuC 224079 - 223039 - | ferric cation import ABC transporter, ATP-binding protein afuB 226173 - 224095 - | ferric ABC transporter, permease protein TERM 286 226215 - 226239 + r 74 -8.5 -3.19449 | opp_overlap 226217, overlap 226217 226236 TTATTATGTAAAAAA AAGAGCGAGAG CAT CTCTCGCCCTA TTGATAGGCTATTTA TERM 287 226237 - 226217 - R 100 -13.3 -5.82316 | opp_overlap 226215 226217 226236 ATTATGTAAAAAAAA GAGCGAGAG CAT CTCTCGCCC TATTGATAGGCTATT TERM 288 226217 - 226237 + r 84 -11.1 -3.15346 | opp_overlap 226217, overlap 226215 226236 ATTATGTAAAAAAAA GAGCGAGAG CAT CTCTCGCCC TATTGATAGGCTATT afuA 227279 - 226248 - | ferric ABC transporter, iron-binding protein PMI0191 228619 - 227282 - | MFS-family transporter TERM 289 228453 - 228434 - G 73 -5.6 -4.58076 | overlap 228436 ATAAGTGAGATAAAA CAGGCTGG CTAT CCAGCCAA TATCACCTTTATCTA TERM 290 228451 - 228436 - G 84 -10.4 -3.89301 | overlap 228434 AAGTGAGATAAAACA GGCTGG CTAT CCAGCC AATATCACCTTTATC PMI0192 230249 - 228702 - | two-component sensor kinase PMI0193 230883 - 230251 - | two-component response regulator TERM 291 230781 - 230759 - G 71 -6.2 -4.21974 | opp_overlap 230761 230762, overlap 230761 230762 TTATCATTTAATAAA TAGGGCCAAG CTT CTTGGCCATT TGCGTATTCACCGAC TERM 292 230761 - 230779 + g 73 -8.8 -3.76373 | opp_overlap 230759 230761 230762, overlap 230762 ATCATTTAATAAATA GGGCCAAG CTT CTTGGCCA TTTGCGTATTCACCG TERM 293 230779 - 230761 - G 73 -8.8 -3.70709 | opp_overlap 230761 230762, overlap 230759 230762 ATCATTTAATAAATA GGGCCAAG CTT CTTGGCCA TTTGCGTATTCACCG TERM 294 230762 - 230778 + g 83 -12.3 -2.85503 | opp_overlap 230762 230761 230759, overlap 230761 TCATTTAATAAATAG GGCCAAG CTT CTTGGCC ATTTGCGTATTCACC TERM 295 230778 - 230762 - G 83 -12.3 -2.81702 | opp_overlap 230761 230762, overlap 230761 230759 TCATTTAATAAATAG GGCCAAG CTT CTTGGCC ATTTGCGTATTCACC TERM 296 231077 - 231035 - R 71 -8.4 -3.34222 | overlap 231038 ATTAGCAGGGCAGAA TTACCCCCTCACAAACAGGG AAC CTCCATTTGTAAGGGGGATA GGCAGATTAAGCGAC TERM 297 231074 - 231038 - R 100 -14.5 -2.84 | overlap 231035 AGCAGGGCAGAATTA CCCCCTCACAAACAGGG AAC CTCCATTTGTAAGGGGG ATAGGCAGATTAAGC panD 231464 - 231084 - | aspartate 1-decarboxylase panC 232344 - 231493 - | pantoate--beta-alanine ligase panB 233179 - 232388 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 298 233531 - 233543 + r 80 -7.7 -4.20106 | AAACACGCTTATTAT GTGGT ATC ACCAC TTTTCCATACCATTT folK 234034 - 233537 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase pcnB 235367 - 234027 - | poly(A) polymerase PMI0199 236027 - 235698 - | hypothetical protein TERM 299 236076 - 236053 - R 90 -11 -3.8377 | opp_overlap 236053 236071 AATGTTTAGATTAAA GCCCCAGCAC CTAA GTACTGAGGC TATACTCATTAATTA dksA 236544 - 236089 - | DnaK suppressor protein sfsA 237451 - 236741 - | sugar fermentation stimulation protein TERM 300 239775 - 239755 - g 71 -3.9 -4.86385 | overlap 239757 ATGGTGAAAAACAAA GTCCTATTG TGG CAAAAGGGC AATTACCTGTAGTGA hrpB 237537 - 239966 + | ATP-dependent RNA helicase TERM 301 240508 - 240484 - g 82 -7.9 -4.63932 | overlap 240488 GACCTTTGAACAAAA CTCATTGGTGA GTA TCACCAATATG AATAATCAGCGTCAA TERM 302 240504 - 240488 - g 71 -9.5 -2.84841 | overlap 240484 TTTGAACAAAACTCA TTGGTGA GTA TCACCAA TATGAATAATCAGCG TERM 303 240822 - 240811 - g 74 -4.4 -4.88293 | AACGCTAAAAAGAAA GCTT AATG AAGC CTATATGGCGATTAT mrcB 240095 - 242407 + | penicillin-binding protein TERM 304 242436 - 242460 + T 100 -9.4 -5.40072 | gap 1, opp_overlap 242436 TATTGAGATAAAAAA TATCCTCCTGC AATC GC-GGAGGATA TTTTTTTGCCAGCAA TERM 305 242460 - 242436 - T 100 -9.4 -5.38047 | gap 1, opp_overlap 242436 TATTGAGATAAAAAA TATCCTCCTGC AATC GC-GGAGGATA TTTTTTTGCCAGCAA hemL 243796 - 242510 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 306 242612 - 242594 - G 76 -7.4 -4.21945 | AGCAATAGACATAAA GCCAGCTT CAA AAGCCGAC GGAGCGAGGTAAATA TERM 307 243708 - 243697 - G 72 -3.6 -5.07486 | opp_overlap 243698, overlap 243698 243699 CACGTTCAATAAAAA GCGG TGTG CCAC CAACACCGTTAAATG TERM 308 244280 - 244266 - g 83 -6.4 -5.01497 | opp_overlap 244266 244266 ATGACCATAGAAAAA CAAGGC GTT GCCTTA GTTATTGATCCAATG PMI0206 244074 - 244418 + | iron-sulphur protein hcp 245183 - 245701 + | conserved hypothetical protein (hemolysin co-regulated protein) TERM 309 245714 - 245737 + F 90 -11.1 -3.87994 | TAATCTCTTATGATT TATGGGCTC TATATT GAGCCCATA TTTATAAAAATAGAT PMI0208 245814 - 247940 + | VgrG-like protein TERM 310 248537 - 248557 + G 90 -11.3 -4.07687 | ATGATTAATTTAGTT GTTGAGAAT CTT ATTCTCAAC TTTTGGGAAGAAAAT PMI0209 247940 - 248740 + | hypothetical protein TERM 311 250361 - 250377 + G 76 -4.4 -5.1101 | ACAGATCATTATATG GGCAGA GGCTA TTTGCC TTTTTTACATGATCA PMI0210 248741 - 250660 + | lipase TERM 312 251214 - 251229 + G 71 -6.2 -4.17556 | AGCTTATGGTTATAT GGAAAA GAAC TTTTCC TTTATTACCAATCTC PMI0211 250641 - 251435 + | lipoprotein TERM 313 252192 - 252207 + G 71 -6.2 -4.17556 | AGCTTATGGTTATAT GGAAAA GAAC TTTTCC TTTATTACCAATCTC PMI0212 251619 - 252413 + | lipoprotein PMI0213 253282 - 252452 - | periplasmic binding protein mtnN 254089 - 253382 - | MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase) (s-adenosylhomocysteine nucleosidase) TERM 314 254901 - 254887 - g 75 -2.8 -5.28481 | TATTTAATGAAAAAA CCAG GTTATTA CTGG TCTGAAGCTGAATTT dgt 254209 - 255717 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 315 256176 - 256158 - g 75 -3 -5.19916 | opp_overlap 256159, overlap 256159 AAAACAGGTAAAAAA CTTGGCGG TAA CCGCTAAT GCATTGGATGCTAAC rumA 256105 - 257430 + | 23S rRNA (uracil-5-)-methyltransferase TERM 316 259278 - 259260 - g 72 -4.5 -4.8048 | overlap 259263 CGGCTACACCAAAAA CAACCAC GTCAG GTGGTGG CAGTATTGTGGTCGA TERM 317 259275 - 259263 - g 71 -4.8 -4.50988 | overlap 259260 CTACACCAAAAACAA CCAC GTCAG GTGG TGGCAGTATTGTGGT relA 257486 - 259726 + | GTP pyrophosphokinase TERM 318 259781 - 259748 - f 79 -10.5 -2.53876 | gap 1, opp_overlap 259753, overlap 259753 GGTCACCTTAACGGA TAAAATGCCAAG-CAC AAT GTGTCTTGGCATTTTT TTACGAAATTTTGTT TERM 319 259776 - 259753 - f 95 -10.4 -4.4715 | gap 1, opp_overlap 259753, overlap 259748 CCTTAACGGATAAAA TGCCAAG-CAC AAT GTGTCTTGGCA TTTTTTTACGAAATT TERM 320 259753 - 259776 + F 100 -10.4 -5.41746 | gap 1, opp_overlap 259748 259753 CCTTAACGGATAAAA TGCCAAG-CAC AAT GTGTCTTGGCA TTTTTTTACGAAATT TERM 321 260555 - 260543 - g 86 -7.7 -5.00616 | GGTTTGTTGAAAAAA TGCTC ACA GAGCA GGGTATAAACATAGA mazG 259837 - 260634 + | nucleotide pyrophosphohydrolase TERM 322 260734 - 260758 + F 91 -4.4 -6.09196 | overlap 260726 AAAAAATTATAAAAG GCGAAATTAT AAAAG GTAATTTTGC TTTTTTTATTTTAGG PMI0219 260773 - 260988 + | hypothetical protein pyrG 261146 - 262783 + | CTP synthase TERM 323 263218 - 263208 - g 76 -6.8 -4.37711 | overlap 263209 263211 TTAGCAAACGCAAAA GCAG CTG CTGC AGCGAAAGGTATGCC eno 262848 - 264149 + | enolase TERM 324 264208 - 264186 - f 73 -7.8 -3.67976 | opp_overlap 264186 TTTATTAATTTTAAA TGGGTGAA TGTATTG TTCACCCA TTTTTTTTGGCGCTA TERM 325 264186 - 264208 + F 100 -9.2 -5.76949 | opp_overlap 264186 TTTATTAATTTTAAA TGGGTGAATG TAT TGTTCACCCA TTTTTTTTGGCGCTA PMI0222 264470 - 265852 + | Sodium:sulfate symporter-family protein TERM 326 265879 - 265900 + F 100 -8.1 -5.85244 | opp_overlap 265874 265879 AATTAATAAATAAAA GGTATCTAT AAAA ATAGGTACC TTTTTTATTTTAATT TERM 327 265900 - 265879 - f 83 -5.9 -5.13527 | opp_overlap 265879, overlap 265874 AATTAATAAATAAAA GGTATCTAT AAAA ATAGGTACC TTTTTTATTTTAATT PMI0223 266036 - 267673 + | alpha-keto acid decarboxylase TERM 328 267693 - 267742 + T 100 -13.2 -3.86015 | gap 1, opp_overlap 267695 267700 267702, overlap 267695 TATTAAAATGTTATA AAGTAAACAGCCATCTAACTATC CGCTC GATAGTTAGATGGC-GTTAACTG TTTATCAAGGCGCTA TERM 329 267740 - 267695 - T 100 -15.8 -3.97406 | gap 1, opp_overlap 267693 267695, overlap 267700 267702 TTAAAATGTTATAAA GTAAACAGCCATCTAACTATC CGCTC GATAGTTAGATGGC-GTTAAC TGTTTATCAAGGCGC TERM 330 267695 - 267740 + T 100 -15.8 -3.51934 | gap 1, opp_overlap 267695 267700 267702, overlap 267693 TTAAAATGTTATAAA GTAAACAGCCATCTAACTATC CGCTC GATAGTTAGATGGC-GTTAAC TGTTTATCAAGGCGC TERM 331 267735 - 267700 - T 100 -14.3 -4.14397 | gap 1, opp_overlap 267695 267693, overlap 267695 267702 ATGTTATAAAGTAAA CAGCCATCTAACTATC CGCTC GATAGTTAGATGGC-G TTAACTGTTTATCAA TERM 332 267734 - 267702 - T 100 -18 -3.66401 | opp_overlap 267695 267693, overlap 267700 267695 GTTATAAAGTAAACA GCCATCTAACTATC CGCTC GATAGTTAGATGGC GTTAACTGTTTATCA mltD 269096 - 267762 - | membrane-bound lytic murein transglycosylase D precursor gloB 269925 - 269170 - | hydroxyacylglutathione hydrolase PMI0226 270041 - 270676 + | hypothetical protein rnhA 271180 - 270701 - | ribonuclease HI TERM 333 270909 - 270919 + g 88 -8.2 -5.04385 | CTTTTATCTGCTTTA CGCC ATT GGCG TTTTTTCCAACTATG TERM 334 271079 - 271068 - G 89 -4.4 -5.60993 | opp_overlap 271068 GTGGTCATAAAAAAA CCTT CACT AAGG GTTTTTTCATGCTGT TERM 335 271973 - 271951 - g 81 -5.5 -5.02074 | TTAGTGGTGAAAAAA GGAGGCCAC TGTTT ATGGCGTCC AGCTCCTGCTTCGAA dnaQ 271246 - 272004 + | DNA polymerase III, epsilon subunit TERM 336 272250 - 272273 + F 91 -5.3 -5.81412 | gap 1, opp_overlap 272250 CAAAATAATTAGAAA CCGTATC-GC TTTAT GCTGATGCGG TTTTTTTTGCCTAAA TERM 337 272494 - 272514 + F 80 -9.1 -3.72152 | overlap 272489 272494 ATTATATTTTGTTAT CGATAATGG TAA CTATTATCG TTATAGTTTTAATTC PMI0229 272591 - 273673 + | ABC transporter, permease protein (FecCD transport family) PMI0230 273673 - 274467 + | ABC transporter, ATP-binding subunit PMI0231 275374 - 274538 - | citrate lyase beta chain TERM 338 275511 - 275489 - H 77 -10 -2.50935 | overlap 275488 AGCTTACTCATCAAC CTTTTTCAAG ACG CTCGAAAAAG TAAAAAAAGGTTAAG TERM 339 275531 - 275520 - H 87 -4.4 -5.85011 | GAAAAAGTAAAAAAA GGTT AAGT AACC CCCCAAGATAGATAA TERM 340 276044 - 276060 + G 74 -5.1 -4.68384 | TCTAATGAGATGGCA CAAGAGG GAA CATCTTG TTTTATTGAATGGAT PMI0232 275588 - 277471 + | siderophore biosynthesis protein TERM 341 277744 - 277734 - g 75 -5.4 -4.67982 | GGCGATGTAATAAAA GATG ATC CATC CGTTCAAGTGACATC PMI0233 277482 - 279593 + | TonB-dependent siderophore receptor TERM 342 280108 - 280072 - g 70 -9.5 -2.68279 | overlap 280068 280069 280104 TATTGAGGAAATGGA CGAGCTTATTCACCTTG CTA CAAGGTGGATAAGTCCA TCAGGACGTATAAGT TERM 343 280655 - 280667 + G 77 -6.3 -4.52873 | opp_overlap 280654 GTTCGTCCATATGAT CATGT CGG ACATG TTATTTTTGTCGAAG PMI0234 279605 - 281008 + | decarboxylase PMI0235 281020 - 282036 + | pyridoxal-phosphate dependent enzyme TERM 344 282437 - 282473 + G 71 -7.4 -3.83026 | overlap 282442 TGATGCATCCAATAT TGTTATATGGGGAATG AAAGA TGTTCCCCATATTGCA TTTGATCTGCAACCG PMI0236 282033 - 283190 + | octopine/opine/tauropine dehydrogenase PMI0237 283192 - 284403 + | MFS-family transporter PMI0238 284414 - 285541 + | substrate-binding protein TERM 345 285617 - 285599 - g 73 -10.4 -2.87146 | opp_overlap 285597, overlap 285598 GTCCTTCAGAAGAAG TCAACATG GCT CATGTTGA AGCTTTAACTAAGGA PMI0239 285544 - 285990 + | hypothetical protein TERM 346 286236 - 286249 + F 71 -2.3 -5.47159 | opp_overlap 286236, overlap 286237 TCACTGATTACGATA GCCAC CTTT GTGGA TTTTTTATATTGCGG TERM 347 287055 - 287074 + G 70 -9.4 -2.66216 | overlap 287054 TTCACTGTTAATTTG CAAAACCA CTAT TGGTTTTG GTTCTCCTCATAAAG tktA 286327 - 288321 + | transketolase TERM 348 288339 - 288374 + F 86 -4 -5.71983 | AATAAATGTTAACAA GAGCACATTTTTGGGA ATAA TTTCTCAGATGTGCTC TTTTTTTATGCTTCC TERM 349 288465 - 288495 + F 72 -5.7 -4.53774 | gap 2, opp_overlap 288472, overlap 288472 ACCGTTTCAGTTATG CTA-AAAATGT-CGG TGA CCGCACATTTTTTAG TTTTACTTGATTTAT TERM 350 288472 - 288487 + F 77 -4 -5.48054 | gap 1, opp_overlap 288472, overlap 288465 CAGTTATGCTAAAAA TGT-CGG TGA CCGCACA TTTTTTAGTTTTACT epd 288580 - 289599 + | D-erythrose 4-phosphate dehydrogenase TERM 351 289649 - 289629 - f 74 -9.1 -3.1552 | overlap 289627 CGGTACTCAGCAATA GCACATTAT GTG ATAATGCGC GGTACTGAACAGAAG TERM 352 290078 - 290062 - g 72 -4.3 -4.69559 | AAAGGCGAAAAGAAA GACGACG AAA CGCTGTC TAAACAATATGCTGC TERM 353 290624 - 290609 - g 78 -7.6 -4.31329 | overlap 290601 TGAAAAACGCCAAAA CCATTC TGTG GAATGG CCCTGTGGGTGTCTT TERM 354 290848 - 290824 - g 75 -2.8 -5.1925 | opp_overlap 290808 GTAGAAGGTAAAAAA CTTCCTGC GGTTGCTAT GCTGGAAG AACGCGCTAAACAGT pgk 289702 - 290865 + | phosphoglycerate kinase fbaA 290930 - 292009 + | fructose-bisphosphate aldolase class II TERM 355 292027 - 292067 + T 75 -8.3 -3.63694 | opp_overlap 292028 292030 292039, overlap 292028 292039 CAATTTTATTGTAAT ACACCTAAAAAACCCGCTT AGT ATGCGGGTTTTTTTGTTGG TTGTTAGCACTAGAT TERM 356 292028 - 292066 + T 87 -11.8 -2.77895 | opp_overlap 292028 292030 292039, overlap 292027 292039 AATTTTATTGTAATA CACCTAAAAAACCCGCTT AGT ATGCGGGTTTTTTTGTTG GTTGTTAGCACTAGA TERM 357 292066 - 292028 - T 89 -11.8 -3.0634 | opp_overlap 292028 292027 292039, overlap 292030 292039 AATTTTATTGTAATA CACCTAAAAAACCCGCTT AGT ATGCGGGTTTTTTTGTTG GTTGTTAGCACTAGA TERM 358 292064 - 292030 - T 72 -8.6 -3.08813 | opp_overlap 292028 292027 292039, overlap 292028 292039 TTTTATTGTAATACA CCTAAAAAACCCGCTT AGT ATGCGGGTTTTTTTGT TGGTTGTTAGCACTA TERM 359 292039 - 292055 + T 100 -7.9 -5.87996 | opp_overlap 292030 292028 292039, overlap 292028 292027 AATACACCTAAAAAA CCCGCTT AGT ATGCGGG TTTTTTTGTTGGTTG TERM 360 292055 - 292039 - T 91 -7.9 -5.15381 | opp_overlap 292039 292028 292027, overlap 292030 292028 AATACACCTAAAAAA CCCGCTT AGT ATGCGGG TTTTTTTGTTGGTTG PMI0244 292313 - 292101 - | hypothetical protein TERM 361 292332 - 292342 + r 74 -5.4 -4.77438 | TATCTGCTCCTATTA CCAA TCA TTGG TTTTTAATCATGAAT TERM 362 292527 - 292542 + r 91 -10.4 -4.1523 | opp_overlap 292527 ATAAGAGATAAAAAA GCGCCT TTCT AGGCGC TTTGTCTGTGATAAG TERM 363 292542 - 292527 - R 100 -10.4 -5.48787 | opp_overlap 292527 ATAAGAGATAAAAAA GCGCCT TTCT AGGCGC TTTGTCTGTGATAAG PMI0245 294053 - 292575 - | MFS-family transporter TERM 364 293059 - 293047 - G 75 -7.7 -4.07568 | opp_overlap 293047 CCTTTCGCGCCAAAA TGGCT ATA AGCCA TTGCTAAGATAGGGC TERM 365 294290 - 294311 + r 71 -7.5 -3.51034 | GTCATTAATTTATTT TCAATTAAA GCGA TTTAATTGA TCTTTGGTATAAATA hpaC 295195 - 294677 - | 4-hydroxyphenylacetate 3-monooxygenase, reductase component PMI0247 295282 - 295494 + | hypothetical protein hpcR 295772 - 296209 + | homoprotocatechuate degradative operon repressor (MarR family transcriptional regulator) TERM 366 296226 - 296259 + T 100 -9.8 -5.00895 | opp_overlap 296231, overlap 296231 ATGTGTGCACCAAGA AAAAAGAGATGATG TTATAC CATCATCTCTTTTG TTTTTATGTAATAGG TERM 367 296254 - 296231 - T 100 -9.7 -5.5112 | opp_overlap 296231 296226 TGCACCAAGAAAAAA GAGATGATG TTATAC CATCATCTC TTTTGTTTTTATGTA TERM 368 296231 - 296254 + T 100 -9.7 -5.38839 | opp_overlap 296231, overlap 296226 TGCACCAAGAAAAAA GAGATGATG TTATAC CATCATCTC TTTTGTTTTTATGTA betU 298283 - 296280 - | secondary glycine betaine transporter TERM 369 298621 - 298602 - R 100 -10.8 -5.60993 | opp_overlap 298602 TTTTGCACAAAAAAA GCCAGTAA AATA TTACTGGC TTTTTCAACATCAAA TERM 370 298602 - 298621 + r 100 -10.8 -4.59773 | opp_overlap 298602 TTTTGCACAAAAAAA GCCAGTAA AATA TTACTGGC TTTTTCAACATCAAA PMI0250 299317 - 298652 - | lipoprotein TERM 371 299921 - 299905 - g 73 -2.3 -5.20333 | opp_overlap 299910 299911, overlap 299910 299911 TACTGAGAAGAAAAA TAAGATT GAT ATTCTTA ATATCACTTCTAGGT PMI0251 299567 - 300241 + | hypothetical protein rnz 301241 - 300324 - | ribonuclease Z PMI0253 301428 - 301544 + | hypothetical protein PMI0254 302482 - 303009 + | fimbrial protein TERM 372 303021 - 303052 + F 85 -10.4 -3.40639 | opp_overlap 303025, overlap 303025 ATAATAGTCGTCAAA TAAAGCTTTGTATA AGGA TATACAAGGCTTTG TTAATTGATGAGCTT TERM 373 303048 - 303025 - f 78 -6.8 -4.42062 | opp_overlap 303025 303021 TAGTCGTCAAATAAA GCTTTGTATA AGGA TATACAAGGC TTTGTTAATTGATGA TERM 374 303025 - 303048 + F 88 -9 -4.34737 | opp_overlap 303025, overlap 303021 TAGTCGTCAAATAAA GCTTTGTATA AGGA TATACAAGGC TTTGTTAATTGATGA TERM 375 305148 - 305161 + G 76 -6.7 -4.43877 | opp_overlap 305148, overlap 305135 AGTAGTCGAGGTAAA CCATC GGCT GATGG TTTCTTTACACATTA TERM 376 305305 - 305317 + G 74 -6.2 -4.34737 | opp_overlap 305302 ACCGTAGCAATATGC CGGG AGCAA CCCG TTTGTTAATTGATAC PMI0255 303249 - 305876 + | fimbrial outer membrane usher protein PMI0257 306695 - 307249 + | fimbrial protein TERM 377 307641 - 307661 + G 70 -5.5 -4.47456 | ACGATAGATAGTGAG CCATTTATT TTA AATAAACGG TTTGTTATTACCTCT PMI0258 307263 - 307781 + | minor fimbrial subunit PMI0259 307792 - 308328 + | fimbrial protein PMI0260 308347 - 309195 + | fimbrial adhesin PMI0261 309216 - 309536 + | fimbrial operon regulator TERM 378 309663 - 309704 + T 90 -11.2 -3.90328 | gap 2, overlap 309702 GCACTCATTAGGCTT GCAATCACTATCC--CTAAG CGAG CTTAGATGGGTAGTGATTGC TTTATGAGCATTATA mrpI 310667 - 310101 - | fimbriae recombinase TERM 379 310333 - 310348 + g 87 -6.1 -5.31275 | opp_overlap 310317 CCATAAACTTGTTGA CGGGA AATTGG TCCCG TTTTTTGTGATAAAA mrpA 311346 - 311873 + | major mannose-resistant/Proteus-like fimbrial protein TERM 380 311910 - 311881 - f 79 -3.6 -5.52023 | opp_overlap 311884, overlap 311884 311886 ATCAGTAAGAAAAAA TAAGTTCTGTAC AAGGAA GTACAGAGCTTT AATTCCTGTCTTTAC TERM 381 311907 - 311884 - f 74 -5.3 -4.82661 | opp_overlap 311884, overlap 311881 311886 AGTAAGAAAAAATAA GTTCTGTAC AAGGAA GTACAGAGC TTTAATTCCTGTCTT TERM 382 311884 - 311907 + F 77 -7.5 -3.99955 | opp_overlap 311884 311881 311886 AGTAAGAAAAAATAA GTTCTGTAC AAGGAA GTACAGAGC TTTAATTCCTGTCTT mrpB 311959 - 312519 + | fimbrial subunit TERM 383 313171 - 313157 - g 70 -5.7 -4.38472 | GCTAAAGGAAAACAA CGTCA GCAAG TGACG GGGTTAGGTACGTTA mrpC 312542 - 315157 + | fimbrial outer membrane usher protein mrpD 315213 - 315971 + | fimbrial chaperone protein mrpE 315985 - 316530 + | fimbrial subunit mrpF 316543 - 317028 + | fimbrial subunit TERM 384 317241 - 317224 - g 70 -3.5 -4.83615 | TATTCCTGATAAAAA CCTTTAT GCCT ATAAAAG AACGCCAAGCAAGTT mrpG 317039 - 317587 + | fimbrial subunit mrpH 317609 - 318436 + | fimbrial adhesin mrpJ 318461 - 318781 + | fimbrial operon regulator TERM 385 318852 - 318871 + F 100 -7.8 -5.80817 | overlap 318853 ATTACCTTATTGGTA GGGCAAGG GCAA CCTTGCCG TTTTTTTATGTTGAA TERM 386 318853 - 318870 + F 100 -11.3 -4.06863 | overlap 318852 TTACCTTATTGGTAG GGCAAGG GCAA CCTTGCC GTTTTTTTATGTTGA TERM 387 320228 - 320218 - g 73 -2.4 -5.24129 | CCTCTTGAGAAAAAA GCAC TAT GGGC AGCAACAGGAACATT TERM 388 320905 - 320916 + G 72 -4.4 -4.68655 | TGGTCACTGTTATTC TACC TTTG GGTA TTTGTTTTCCACTTA mtrF 319405 - 320979 + | efflux pump component TERM 389 320994 - 321021 + T 100 -10.8 -4.47049 | opp_overlap 320997 ATATTATTCTTTAGA TAAGCTTATACA AGGA TGTATAGGCTTA TTTGTGTTTATCTTT PMI0273 321402 - 321019 - | hypothetical protein TERM 390 321486 - 321512 + H 80 -9.8 -3.4811 | opp_overlap 321485 321483 321481 321488, overlap 321483 CACATAAAATGATAT TATATTTTTATA TTA TATAAAAATATA TATTGTTATAGGGAG PMI0274 321534 - 321872 + | hypothetical protein TERM 391 321917 - 321901 - f 90 -12.3 -2.83164 | opp_overlap 321901 TTAGTTATCATTATA GCCAGCA TAT TGCTGGC TTTTTGGGTTTTAAA TERM 392 321901 - 321917 + F 100 -12.3 -4.87318 | opp_overlap 321901 TTAGTTATCATTATA GCCAGCA TAT TGCTGGC TTTTTGGGTTTTAAA arnT 322226 - 323872 + | undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase TERM 393 324293 - 324319 + T 83 -6.7 -4.83722 | opp_overlap 324293 TATCATAGACGCAAA GCCCTATAA CCTGATTAA TTATAGGGC TTTTATTATAGTATT TERM 394 324319 - 324293 - T 75 -8.1 -3.74792 | opp_overlap 324293 TATCATAGACGCAAA GCCCTATAACC TGATT AATTATAGGGC TTTTATTATAGTATT TERM 395 324351 - 324373 + T 70 -6.4 -4.28589 | opp_overlap 324350 324352, overlap 324352 324362 324365 AGTTAAATTAAATAT ATATTTTCAG CTA CTGAAAATAG TTTTCAATAATTTTT TERM 396 324352 - 324372 + T 81 -9.9 -3.15527 | opp_overlap 324350 324352, overlap 324351 324362 324365 GTTAAATTAAATATA TATTTTCAG CTA CTGAAAATA GTTTTCAATAATTTT TERM 397 324372 - 324352 - T 84 -9.9 -3.38514 | opp_overlap 324352 324351 324362 324365, overlap 324350 GTTAAATTAAATATA TATTTTCAG CTA CTGAAAATA GTTTTCAATAATTTT zapD 325713 - 324361 - | type I secretion outer membrane protein zapC 327038 - 325713 - | type I secretion protein zapB 328794 - 327055 - | Type I secretion ATP-binding protein TERM 398 327202 - 327178 - G 79 -9.5 -3.72576 | overlap 327180 GGTGTTTCCATCAAA TATCACTAATA ATT TATTAGTGACA GAAAGTAGCTGTTTT TERM 399 327200 - 327180 - G 77 -9.9 -3.44848 | overlap 327178 TGTTTCCATCAAATA TCACTAATA ATT TATTAGTGA CAGAAAGTAGCTGTT TERM 400 327806 - 327830 + g 100 -3.6 -6.17669 | opp_overlap 327806 ATATTAACAAGTAAT TGGCCTTG AGGCTTAGG TAAGGCCA TTTTTTTATTTTCTT TERM 401 328618 - 328593 - G 75 -2.7 -5.24799 | gap 1, overlap 328595 CCATAAAGATAAAAA GA-GCTAACA TAATGAT TGTTAGCATC AATAGTGTCATTTCA TERM 402 328949 - 328918 - R 79 -6.6 -4.56914 | overlap 328920 TCATTTAAAGCAAAA GAGAGTAGGAGAAA TAAC TTTCTCCTACCCAA CTATGACTTAAACAA TERM 403 328947 - 328920 - R 100 -13.6 -3.88998 | overlap 328918 ATTTAAAGCAAAAGA GAGTAGGAGAAA TAAC TTTCTCCTACCC AACTATGACTTAAAC zapA 330432 - 328957 - | metalloprotease TERM 404 330029 - 330053 + g 79 -6.6 -4.65895 | opp_overlap 330031 330033 330035, overlap 330031 GTGCCATTGGGATCA TAGATATTAC CAAAA GTAATATCTG TTTTTACGTCAGAAG TERM 405 330465 - 330483 + r 73 -7.6 -3.61232 | overlap 330448 330463 AATTTAGGTTAAGTT TATTTTCA TAC TGAAAATA TATTTATCTGGCGAA TERM 406 330961 - 330935 - R 79 -4.7 -5.18297 | GAATAATAAACAAAA TAAAAATAACA TAATG TATTATTTTTA TACTGCTAAAAAACA TERM 407 331017 - 330995 - R 81 -4.2 -5.65927 | CATCTAAATAAAAAA GGACTACAAT ATA ATCATAATCC TTATTGTTAATTAGA zapE 333105 - 331042 - | metalloprotease TERM 408 332714 - 332759 + g 71 -7.4 -3.92276 | gap 1, overlap 332713 TATATGGTTGTTTGT GTATT-ATAAAAATAAGGATG TATAC TATTCTTATTTTTATTAATAC TATTTTCTATATCCT PMI0282 335300 - 333336 - | metalloprotease TERM 409 335474 - 335504 + r 80 -10.7 -2.69932 | opp_overlap 335469 335480, overlap 335480 TAGAAATAAAGTTTA TAGAAACACACTA TTTAT TAGTGTGTTTTTA GTTGGTTATCGTTAT TERM 410 335498 - 335480 - R 77 -7.5 -4.07562 | opp_overlap 335474 335480 TAAAGTTTATAGAAA CACACTA TTTAT TAGTGTG TTTTTAGTTGGTTAT TERM 411 335480 - 335498 + r 89 -7.5 -4.9445 | opp_overlap 335480, overlap 335474 TAAAGTTTATAGAAA CACACTA TTTAT TAGTGTG TTTTTAGTTGGTTAT PMI0283 337571 - 335607 - | metalloprotease TERM 412 337771 - 337809 + G 89 -5.4 -5.49569 | opp_overlap 337778 TATTATTATTTTTAA TAAAAAAGGTACCGCAAT ATT ATTACAGTGCCTTTTCTA TTTTTTCTGTTACTG TERM 413 337802 - 337778 - g 89 -5.7 -5.45652 | opp_overlap 337771 ATTTTTAATAAAAAA GGTACCGCAAT ATT ATTACAGTGCC TTTTCTATTTTTTCT PMI0284 337728 - 338144 + | hypothetical protein PMI0285 340167 - 338218 - | metalloprotease TERM 414 340371 - 340417 + H 100 -22.8 -4.05004 | opp_overlap 340375 340382, overlap 340375 340382 TAATATGTTTCCTGT TAAATAGAAAAGGCACTGCAAT ATG ATTACAGTGCCTTTTCTATTTA TTATTATTATGATAG TERM 415 340413 - 340375 - H 100 -21.4 -3.53091 | opp_overlap 340371 340375 340382, overlap 340382 ATGTTTCCTGTTAAA TAGAAAAGGCACTGCAAT ATG ATTACAGTGCCTTTTCTA TTTATTATTATTATG TERM 416 340375 - 340413 + H 100 -19.2 -4.60292 | opp_overlap 340375 340382, overlap 340371 340382 ATGTTTCCTGTTAAA TAGAAAAGGCACTGCAAT ATG ATTACAGTGCCTTTTCTA TTTATTATTATTATG TERM 417 340406 - 340382 - H 100 -13.7 -4.78848 | opp_overlap 340375 340371 340382, overlap 340375 CTGTTAAATAGAAAA GGCACTGCAAT ATG ATTACAGTGCC TTTTCTATTTATTAT TERM 418 340382 - 340406 + H 100 -11.5 -4.91194 | opp_overlap 340382 340375, overlap 340375 340371 CTGTTAAATAGAAAA GGCACTGCAAT ATG ATTACAGTGCC TTTTCTATTTATTAT PMI0286 340636 - 341520 + | transcriptional regulator PMI0287 342770 - 341514 - | amidohydrolase/metallopeptidase TERM 419 342131 - 342142 + g 75 -3 -5.25656 | CAGCGATACCATTGA CAAT TCCA ATTG TTTTTTGATCGTTTT TERM 420 342854 - 342836 - R 74 -3.1 -5.36314 | opp_overlap 342837, overlap 342829 342837 TAAAAGATTAAAAAA GCCATCT TTTAT AGATGGT CTGCTATTTTTATAA TERM 421 343097 - 343125 + r 89 -12 -3.28537 | ATTATTCTCATGGGG TATATTGGATGA TATTC TCATCCAATATA TTAATAATTAAATCT rafY 344524 - 343139 - | glycoporin TERM 422 343609 - 343619 + g 81 -2.6 -5.61596 | CATAACCATAAGCAT TATT GAT AATA TTTTTTTCTAAGGCT TERM 423 344180 - 344191 + g 73 -2.2 -5.27477 | GCGCATGTTAATGGA GGTT AGCT GACC TTTTTTACTTGCAAT pgmB 345223 - 344579 - | beta-phosphoglucomutase TERM 424 345130 - 345145 + g 70 -2.6 -5.00884 | TGTCAAAATCAATTC CTATTT CATT AGATAG TTTTTTCCACGCAAT PMI0290 347933 - 345216 - | glycosyl hydrolase TERM 425 347362 - 347403 + g 82 -6.1 -4.84918 | gap 1 AGAGAAATAAATTGT CCATTAGGTGCATTAACAAA ATC TTCATTAAT-CACCTGATGG TTTTCTATTTGTGAA TERM 426 347970 - 347982 + r 76 -3.3 -5.38054 | TAAATTAATCGACTT GCAAG GTG CCTGC TTTTTCTTTATAGCG treB 349380 - 347959 - | trehalose-specific PTS system, EIIBC component PMI0292 349486 - 349391 - | hypothetical protein treR 350467 - 349499 - | trehalose operon repressor (LacI-family transcriptional regulator) PMI0294 351082 - 350630 - | hypothetical protein TERM 427 350797 - 350811 + g 85 -8.6 -4.39318 | overlap 350796 GGATCTGTGTAGATG CTAGCT TGT AGCTAG TTTTCAGTTTGGTTA PMI0295 351903 - 351079 - | hypothetical protein TERM 428 351448 - 351481 + g 72 -8.5 -3.53125 | overlap 351457 TATGCTTGTTTTTTT TATTGATGATAAAGA GTGA TCTTTATTATTAATA TTCGTATTTATATCT PMI0296 352544 - 352828 + | fimbrial operon regulator PMI0297 352973 - 353533 + | fimbrial subunit TERM 429 353889 - 353900 + G 78 -3 -5.38549 | opp_overlap 353884, overlap 353884 353883 AATGTCAAATCGTTA TCAA ACGG TTGA TTTTTCTTCTTTAAC PMI0298 353710 - 354294 + | fimbrial subunit PMI0299 354349 - 356877 + | fimbrial outer membrane usher protein PMI0300 356889 - 357644 + | fimbrial chaperone protein PMI0301 357676 - 358104 + | fimbrial protein PMI0302 358097 - 358630 + | fimbrial subunit PMI0303 358630 - 359166 + | fimbrial subunit TERM 430 359215 - 359200 - g 71 -6.2 -4.25437 | AAACTAATACATAAA TTTTCC TCGT GGAAAA AAGAAATAGCATTAA TERM 431 359271 - 359285 + G 75 -5.8 -4.69435 | TGACCTAATTTATTT CTTAAT ATT ATTAAG TGTTTTTTTTATTAA PMI0304 359179 - 360330 + | fimbrial adhesin TERM 432 360348 - 360376 + T 77 -4 -5.32608 | gap 1, overlap 360341 TATTTATCTAAATAA GGC-CTATTTATT ATTA GATAAGTAGAGCC TTTTTTACATTTTTT TERM 433 360393 - 360433 + T 78 -2.2 -5.75342 | gap 1, overlap 360398 TTTTTACATTTTTTA GAAATTAACTTAATAATAA ATCT TTATTGATAAGTTG-TTTC TTTTTTTTAAAAAAA TERM 434 360398 - 360429 + T 74 -3.2 -5.33985 | overlap 360393 ACATTTTTTAGAAAT TAACTTAATAATAA ATCT TTATTGATAAGTTG TTTCTTTTTTTTAAA PMI0305 361141 - 360449 - | TetR-family transcriptional regulator TERM 435 361253 - 361221 - R 78 -6.9 -4.36914 | overlap 361222 TTTGTTGTGAGAAAA GTCCCTCCCGCTGAA ATT TTATGCGGGAGGAAT ATAACGAATAGCGTG TERM 436 361252 - 361222 - R 83 -10.4 -3.21934 | overlap 361221 TTGTTGTGAGAAAAG TCCCTCCCGCTGAA ATT TTATGCGGGAGGAA TATAACGAATAGCGT potE 362599 - 361271 - | putrescine-ornithine antiporter speF 364825 - 362663 - | ornithine decarboxylase, inducible TERM 437 364858 - 364884 + r 100 -6.8 -5.98675 | GGTAAAAAATTCTCG CTGAAATATT AAGTAAA AATATTTCAG TTTTTTATTTTTATA TERM 438 365110 - 365124 + r 74 -7.2 -3.99324 | opp_overlap 365101 365100 AAGAATCCATTATAG TCACAT AAA ATGTGA TTTATAATGGTAAAG TERM 439 365944 - 365916 - R 83 -10.4 -3.3514 | opp_overlap 365921, overlap 365918 365921 ATTGAGACTTGAGAA GACAAGCAGTAC AGTTA GTACTGCTTGTA GTCATAGTAGAAAAG TERM 440 365942 - 365918 - R 100 -13 -3.24365 | opp_overlap 365921, overlap 365916 365921 TGAGACTTGAGAAGA CAAGCAGTAC AGTTA GTACTGCTTG TAGTCATAGTAGAAA TERM 441 365939 - 365921 - R 80 -8.9 -3.75824 | opp_overlap 365921, overlap 365918 365916 GACTTGAGAAGACAA GCAGTAC AGTTA GTACTGC TTGTAGTCATAGTAG TERM 442 365921 - 365939 + r 78 -8.9 -3.45023 | opp_overlap 365921 365918 365916 GACTTGAGAAGACAA GCAGTAC AGTTA GTACTGC TTGTAGTCATAGTAG TERM 443 366306 - 366277 - R 80 -6.5 -4.9181 | opp_overlap 366278 366283, overlap 366278 366283 ACATAAGATTAAAAA GTAAAAGGAGAAC CTAA GTTCTCCTTTTGA TATTTCTCTACGACA TERM 444 366305 - 366278 - R 84 -10 -3.53459 | opp_overlap 366278 366283, overlap 366277 366283 CATAAGATTAAAAAG TAAAAGGAGAAC CTAA GTTCTCCTTTTG ATATTTCTCTACGAC TERM 445 366278 - 366305 + r 89 -12.2 -2.76418 | opp_overlap 366277 366278 366283, overlap 366283 CATAAGATTAAAAAG TAAAAGGAGAAC CTAA GTTCTCCTTTTG ATATTTCTCTACGAC TERM 446 366300 - 366283 - R 100 -9.9 -4.80167 | opp_overlap 366278 366283, overlap 366278 366277 GATTAAAAAGTAAAA GGAGAAC CTAA GTTCTCC TTTTGATATTTCTCT TERM 447 366283 - 366300 + r 93 -9.9 -4.5394 | opp_overlap 366283 366278 366277, overlap 366278 GATTAAAAAGTAAAA GGAGAAC CTAA GTTCTCC TTTTGATATTTCTCT TERM 448 366472 - 366486 + r 100 -7.2 -6.17669 | TTTATACCCGTTTAT CTTGAT ATT ATCAAG TTTTTTTGTTTTGTT PMI0308 367252 - 366482 - | hypothetical protein TERM 449 367313 - 367303 - R 71 -5.4 -4.69028 | opp_overlap 367303 ATAACAGAGAGAAAA TAGC AGA GCTA TATTAAAATAAGGCA TERM 450 367753 - 367735 - R 100 -10.2 -5.00884 | ATTCTTGTGAAAAAA CTCGACCG TCT CGGACGAG ATACTGCGGATATGA PMI0311 368581 - 368261 - | hypothetical protein TERM 451 368995 - 368975 - R 90 -4 -5.97575 | opp_overlap 368975, overlap 368966 368991 AATTTACAAAAAAAA GGTTCTTT GGTAA ATAGAACC TTTTAGGTTGGTAAT PMI0312 369944 - 369084 - | hypothetical protein TERM 452 369661 - 369704 + g 73 -7 -4.18058 | overlap 369659 369702 GTATCCATATCTCTA CCATTTGGTAATTTTAATAA TTGA TTCTTAAAATTTGCAAATGG TTTTGAACTATAATT PMI0316 371931 - 370951 - | hypothetical protein TERM 453 371257 - 371272 + g 79 -3.4 -5.43487 | overlap 371262 ACAATGTTTATTATC TAATTT AAAA AAATTA TTTTTTATCTCATTT TERM 454 371845 - 371833 - G 79 -3.4 -5.3671 | opp_overlap 371833 AATAGAATCAAAAAA TTCC AAGGG GGAA ATGTTTTTAAATAAC TERM 455 372159 - 372181 + H 100 -12.8 -3.28924 | opp_overlap 372147 372157 372178, overlap 372147 CAATCCATCAAAGTT GGACTCTTTG TAA CAGAGAGTCC TTATGAACAAACCTA PMI0317 372184 - 372738 + | lipoprotein TERM 456 373370 - 373331 - g 80 -4.4 -5.2696 | overlap 373333 CGAAAAGGTAAAAAA TCGCCATATCACATTA AACCATGA TAACGGGATATGGCTA AAGCATGGCAATGGA PMI0318 372735 - 373439 + | hypothetical protein PMI0319 373458 - 373715 + | hypothetical protein TERM 457 373715 - 373725 + F 71 -3.2 -5.1963 | TAAAAAGTATTTGTA GGGA TTA TTCC TTTTTATTAATTAAG PMI0320 373758 - 374336 + | hypothetical protein PMI0321 374340 - 374609 + | hypothetical protein TERM 458 374658 - 374631 - f 71 -8.6 -2.89881 | opp_overlap 374637, overlap 374637 TAGTTATTGGATACA GAAAAAGAGAGT TTAG ACTCTCTTTTTG CATATCTATGGTGTA TERM 459 374652 - 374637 - f 89 -7.6 -5.03994 | opp_overlap 374637, overlap 374631 TTGGATACAGAAAAA GAGAGT TTAG ACTCTC TTTTTGCATATCTAT TERM 460 374637 - 374652 + F 82 -7.6 -4.73448 | opp_overlap 374637 374631 TTGGATACAGAAAAA GAGAGT TTAG ACTCTC TTTTTGCATATCTAT PMI0322 374836 - 375108 + | transposase TERM 461 375805 - 375783 - T 100 -7 -6.28967 | opp_overlap 375783 GACAAATAAAAAAAA CAGCCTTGAT ATG AGCAAGACTG TTTAGTTTAAGAGTT TERM 462 375944 - 375960 + T 82 -10.9 -2.62616 | opp_overlap 375943 375941 375938 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA TERM 463 376223 - 376199 - T 100 -13 -5.56673 | opp_overlap 376199 ACCGATAACAAAAAA GCTTACCCAA ATTGA TTGGGTAAGC TTTATTTTTAAACAT TERM 464 376199 - 376223 + T 100 -13 -4.86385 | opp_overlap 376199 ACCGATAACAAAAAA GCTTACCCAA ATTGA TTGGGTAAGC TTTATTTTTAAACAT mltC 377317 - 376247 - | membrane-bound lytic murein transglycosylase TERM 465 377371 - 377347 - R 100 -12.2 -4.63218 | opp_overlap 377365, overlap 377348 CTCTGGTGAATAAAA CTCCAGAGCC GTAAT GGCTCTGGAA AATGGATATTATTTT TERM 466 377370 - 377348 - R 100 -13.5 -3.3761 | opp_overlap 377365, overlap 377347 TCTGGTGAATAAAAC TCCAGAGCC GTAAT GGCTCTGGA AAATGGATATTATTT yggX 377652 - 377380 - | probable Fe(2+) trafficking protein mutY 378723 - 377683 - | A/G-specific adenine glycosylase TERM 467 379586 - 379576 - g 71 -6.8 -4.00038 | TACCACGACCAGAAA CACG CCC CGTG ACTAAGTTTGAACAA trmB 378939 - 379658 + | tRNA (guanine-N(7)-)-methyltransferase PMI0328 379658 - 379984 + | hypothetical protein TERM 468 380044 - 380013 - f 100 -11.6 -4.0031 | opp_overlap 380016 380019, overlap 380016 380019 ATTTTTAGCAAATAA TCACAAGGGCATCC AACA GGATGCCCTTGTCT GTCTAGGGAATCAGC TERM 469 380041 - 380016 - f 100 -17.7 -3.05069 | opp_overlap 380016 380019, overlap 380013 380019 TTTAGCAAATAATCA CAAGGGCATCC AACA GGATGCCCTTG TCTGTCTAGGGAATC TERM 470 380016 - 380041 + F 100 -17.7 -2.9914 | opp_overlap 380013 380016 380019, overlap 380019 TTTAGCAAATAATCA CAAGGGCATCC AACA GGATGCCCTTG TCTGTCTAGGGAATC TERM 471 380038 - 380019 - f 100 -13.6 -3.65738 | opp_overlap 380019 380016, overlap 380016 380013 AGCAAATAATCACAA GGGCATCC AACA GGATGCCC TTGTCTGTCTAGGGA TERM 472 380019 - 380038 + F 100 -13.6 -3.64198 | opp_overlap 380016 380013 380019, overlap 380016 AGCAAATAATCACAA GGGCATCC AACA GGATGCCC TTGTCTGTCTAGGGA glsA 380061 - 380987 + | glutaminase PMI0330 381059 - 381796 + | hypothetical protein TERM 473 381937 - 381905 - f 89 -12.1 -3.30159 | opp_overlap 381906, overlap 381906 GTAAGCTGTTTAGAA TGCCCTGCTTAAGTA TTC CACTTAAACAGGGCT AAATTCATGAAAAAG TERM 474 381936 - 381906 - f 100 -15.6 -2.57881 | opp_overlap 381906, overlap 381905 TAAGCTGTTTAGAAT GCCCTGCTTAAGTA TTC CACTTAAACAGGGC TAAATTCATGAAAAA TERM 475 381906 - 381936 + F 95 -12.7 -2.56596 | opp_overlap 381905 381906 TAAGCTGTTTAGAAT GCCCTGCTTAAGT ATTCC ACTTAAACAGGGC TAAATTCATGAAAAA PMI0331 381944 - 382894 + | ABC transporter, substrate-binding protein TERM 476 382877 - 382889 + T 73 -7.7 -3.61356 | CAGCAAATTGAAGCG GTGCA AAG TGCAC TTTAAAATCAGTGAT TERM 477 382934 - 382963 + T 93 -9.4 -4.67607 | opp_overlap 382932 382931 382934 CCGATAAATAAATTA TGCCCATAGTGT AAATGA ACAGTATGGGCA TTTGTTTATTAACGA TERM 478 382963 - 382934 - T 78 -9.4 -3.22499 | opp_overlap 382934, overlap 382932 382931 CCGATAAATAAATTA TGCCCATAGTGT AAATGA ACAGTATGGGCA TTTGTTTATTAACGA yggW 384127 - 382997 - | oxygen-independent coproporphyrinogen III oxidase PMI0333 384713 - 384120 - | hydrolase PMI0334 385287 - 384724 - | hypothetical protein proC 386124 - 385306 - | pyrroline-5-carboxylate reductase PMI0336 386841 - 386143 - | amino acid racemase PMI0337 386869 - 387882 + | type II/IV secretion system protein PMI0338 388298 - 387879 - | holliday junction resolvase PMI0339 388861 - 388298 - | hypothetical protein TERM 479 388936 - 388900 - R 79 -5.1 -5.14563 | GTTTTTATTAAAAAA CCTAGCCCTATTGATAA TGT TTAATATAAGGGCTAGG TAAAGACTTTTAAAC gshB 389930 - 388974 - | glutathione synthetase PMI0341 390672 - 389941 - | hypothetical protein PMI0342 390920 - 391552 + | type IV prepilin-like leader peptidase PMI0343 392301 - 391654 - | hypothetical protein PMI0344 393194 - 392307 - | metallo-beta-lactamase superfamily protein PMI0345 393284 - 394204 + | LysR-family transcriptional regulator lysR 395107 - 394181 - | LysR-family transcriptional regulator lysA 395217 - 396461 + | diaminopimelate decarboxylase TERM 480 396504 - 396534 + T 90 -11.4 -3.56251 | opp_overlap 396504 TCTCCCAATAAAAAA CACCTCATTATT AAATTAA AATAATGAGGTG TTGTATCCGTGTTTC TERM 481 396534 - 396504 - T 100 -11.4 -5.4505 | opp_overlap 396504 TCTCCCAATAAAAAA CACCTCATTATT AAATTAA AATAATGAGGTG TTGTATCCGTGTTTC fadE 399042 - 396595 - | acyl-coenzyme A dehydrogenase gmhA 399281 - 399859 + | Phosphoheptose isomerase PMI0350 399918 - 400685 + | amidotransferase PMI0351 401408 - 400656 - | hypothetical protein TERM 482 402482 - 402497 + G 74 -4 -5.00884 | ATCCTGCGGGATTAG TGGGTA CTCA TATCCA TTTTTTAGAGCCAGT nqrA 401824 - 403164 + | Na(+)-translocating NADH-quinone reductase subunit A nqrB 403168 - 404406 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 404399 - 405184 + | Na+-translocating NADH-quinone reductase subunit C TERM 483 405726 - 405736 + G 72 -4.6 -4.78597 | GGCTTATTCCTATTA GCGC CAA GTGC TTTCTTTATTATTGG nqrD 405177 - 405806 + | Na+-translocating NADH-quinone reductase subunit D nqrE 405812 - 406408 + | Na+-translocating NADH-quinone reductase subunit E nqrF 406425 - 407651 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 484 407721 - 407690 - f 95 -11.6 -3.8572 | overlap 407696 CATAACAGTATGAAA TGACAAGCGCCCAC TAAT GTGGGCGCTCATGA TCAGAAGAGAGATAT TERM 485 407715 - 407696 - f 100 -15 -3.63251 | overlap 407690 AGTATGAAATGACAA GCGCCCAC TAAT GTGGGCGC TCATGATCAGAAGAG apbE 407737 - 408759 + | thiamine biosynthesis lipoprotein TERM 486 408975 - 408954 - g 75 -5.9 -4.79949 | gap 1, opp_overlap 408968 CTCGTAAAAAAAGAA TGGCGAA-AG AAG CTGCTCGCCA AGAGCTATTGCAAAA PMI0359 408779 - 409006 + | hypothetical protein TERM 487 409106 - 409057 - T 100 -15.5 -2.55896 | gap 1, opp_overlap 409068, overlap 409063 409068 TTTATCAAGTAATAG CTAAA-ATAAAAGAGTGACGTATA TTT TATACGCCACTCTTTTTTGTTTAG AAAAATCGCTTTCAG TERM 488 409099 - 409063 - T 100 -14.7 -4.29928 | opp_overlap 409068, overlap 409057 409068 AAGTAATAGCTAAAA TAAAAGAGTGACGTATA TTT TATACGCCACTCTTTTT TGTTTAGAAAAATCG TERM 489 409094 - 409068 - T 100 -14.6 -5.11836 | opp_overlap 409068, overlap 409063 409057 ATAGCTAAAATAAAA GAGTGACGTATA TTT TATACGCCACTC TTTTTTGTTTAGAAA TERM 490 409068 - 409094 + T 100 -12.4 -5.63517 | opp_overlap 409068 409063 409057 ATAGCTAAAATAAAA GAGTGACGTATA TTT TATACGCCACTC TTTTTTGTTTAGAAA PMI0360 409375 - 409163 - | general stress response protein TERM 491 409299 - 409315 + g 75 -3 -5.34381 | gap 1, overlap 409293 409292 ATATCCAGTTCATCA TGGGTGA GTTT TC-CCCA TTTTTCTTTCACTTT TERM 492 409460 - 409448 - R 79 -4.7 -5.17576 | TATTAAGGTAAAAAA GCGCC AAT GTCGC AACGATGTTTACTCT PMI0361 410341 - 409469 - | phosphodiesterase dinB 410577 - 411632 + | DNA polymerase IV TERM 493 411671 - 411644 - T 91 -7.7 -5.22794 | opp_overlap 411644 ATAAGTATTAAAAAA CCATAGCGAGC ATCAAG GCGCACTATGG TTAATGTATTTAAAT PMI0363 413871 - 411709 - | TonB-dependent ferric siderephore receptor TERM 494 413945 - 413997 + r 74 -3.1 -5.4505 | opp_overlap 413946 ACCATTATGTAAATA TTAATACTAATGATAATTATTATTA TTC TATAAATTATTTTTATTAGTATTAA TTTTTTATTACAAAA TERM 495 414080 - 414096 + r 74 -7.9 -3.81154 | opp_overlap 414080 TAAAATAACAAAAAA CCCGCCT ATT AAGCGGG TTTGATAACTGTTTT TERM 496 414096 - 414080 - R 100 -10.1 -5.77677 | opp_overlap 414080 TAAAATAACAAAAAA CCCGCCT ATT AAGCGGG TTTGATAACTGTTTT pepD 415578 - 414121 - | aminoacyl-histidine dipeptidase TERM 497 414240 - 414261 + g 86 -7.3 -5.08824 | opp_overlap 414240 TTGGCCCAATAGAGA CCATATCCA TATC TGGATAAGG TTTTTTAAATAGACC TERM 498 416083 - 416101 + G 73 -9.6 -3.17444 | overlap 416081 TTGCTCGTGAATTGG GTATCCGC CAT GTGGATAC TGTCTGTATTTCTAG gpt 415932 - 416393 + | xanthine-guanine phosphoribosyltransferase TERM 499 416431 - 416469 + F 88 -6.1 -5.37043 | gap 1, opp_overlap 416431 AATATATTGATAAAA TCCTCGTTTATTGAACTG ACCC CAGTTCC-TATGCGAGGA TTTTTTATATCGGCT yafA 416626 - 417876 + | esterase crl 417948 - 418349 + | curlin genes transcriptional regulator TERM 500 418381 - 418404 + F 91 -11.8 -3.56273 | CTTTTCATAGATTTT GCGTTATGTC AGTT GGCATAACGC TTCTCTCCTGATAAA proB 418462 - 419565 + | glutamate 5-kinase TERM 501 419710 - 419684 - g 77 -11 -2.80816 | CGCTGATTTATTAGA GCAGCAAGAA GCCATTA TTCTTGCTGC TAATGAAAAAGATAT proA 419577 - 420830 + | gamma-glutamyl phosphate reductase TERM 502 420847 - 420876 + F 100 -8.1 -5.84432 | gap 1, opp_overlap 420843 420845 420850, overlap 420850 AATCCCTTAAATAGC TAA-GCCATACTTT CAT AAAGTGTGGCTTTA TTTTTTTGTATTGTG TERM 503 420850 - 420872 + F 100 -11.4 -5.29742 | opp_overlap 420843 420845 420850, overlap 420847 CCCTTAAATAGCTAA GCCATACTTT CAT AAAGTGTGGC TTTATTTTTTTGTAT TERM 504 420872 - 420850 - f 77 -9.2 -3.24021 | opp_overlap 420850 420847, overlap 420843 420845 CCCTTAAATAGCTAA GCCATACTTT CAT AAAGTGTGGC TTTATTTTTTTGTAT aroL 420975 - 421487 + | shikimate kinase TERM 505 421862 - 421850 - g 70 -9.1 -3.17194 | opp_overlap 421849 421850 ATCCCGCTAATCCAA TGGCG GTT CGCCA ATTAGTTAAAGAAGT TERM 506 423361 - 423351 - g 73 -6.8 -4.29106 | overlap 423336 GCCTACAGCAATAAA TGCC GAA GGCA TCGAAGAAGTGGGTT aas 421594 - 423750 + | Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamine acyltransferase and acyl-[acyl-carrier-protein] synthetase PMI0373 423750 - 424952 + | MFS-family transporter TERM 507 425380 - 425370 - g 88 -8.2 -5.06414 | GCTTTGCAATAAAAA CCCC AGA GGGG CTTCGAGTGGTTGCT PMI0374 424985 - 425491 + | competence-damaged protein recA 425599 - 426666 + | protein RecA (recombinase A) TERM 508 426798 - 426778 - f 89 -10.5 -3.88498 | opp_overlap 426778 TGGTCAGATATCAAA GGAAGCCTT AAA AAAGCTTCC TTTTTGTTTTATGTA TERM 509 426778 - 426798 + F 100 -8.3 -5.58522 | opp_overlap 426778 TGGTCAGATATCAAA GGAAGCCTT AAA AAAGCTTCC TTTTTGTTTTATGTA TERM 510 426833 - 426860 + F 100 -6.5 -5.99318 | overlap 426835 TTAACCACTCAGTGG TAGTGAAAAAT TAGTTT ATTTTTCACTG TTTTTCTTTTTTTTT TERM 511 426835 - 426858 + F 78 -6.9 -4.51984 | overlap 426833 AACCACTCAGTGGTA GTGAAAAAT TAGTTT ATTTTTCAC TGTTTTTCTTTTTTT TERM 512 429930 - 429920 - g 71 -4 -4.86621 | ATGTTGAACCAAAAA TGTT AAG AACA ATGGTTGATGATTTA alaS 427567 - 430194 + | alanyl-tRNA synthetase TERM 513 430214 - 430242 + F 100 -14.7 -4.13591 | opp_overlap 430214 TAGCTACCTGAAAAA GCGTTATCCCTAG TTT TTAGGGGTAACGC TTTATGTAATATTGA TERM 514 430242 - 430214 - f 100 -11.8 -4.62783 | opp_overlap 430214 TAGCTACCTGAAAAA GCGTTATCCCTA GTTTT TAGGGGTAACGC TTTATGTAATATTGA csrA 430412 - 430600 + | carbon storage regulator TERM 515 430640 - 430668 + F 80 -5.2 -5.23292 | ACCCTTTCTTCGTAA GCGTCCACACTT TTGCC GGGTCTGGGCGC TTTTCTTTTCTATAG TERM 516 431253 - 431274 + F 81 -4.5 -5.50723 | gap 1 TGCACCATATTCCAA CCCCATG-AT TAA ATGTATGGGG TTTTTATTTTGGTGC TERM 517 431530 - 431540 + F 74 -5.4 -4.87786 | GTTCGAATCCTCCAG GATG CAC CATC TTTTTATAAAGTTAG TERM 518 431667 - 431685 + F 100 -9.5 -5.2197 | opp_overlap 431667 TGCACCATCTTTAAA GCCTCGC TTATC GCGGGGC TTTTTGCTTTTTCTC TERM 519 431685 - 431667 - f 70 -7.3 -3.58343 | opp_overlap 431667 TGCACCATCTTTAAA GCCTCGC TTATC GCGGGGC TTTTTGCTTTTTCTC gshA 431843 - 433423 + | glutamate--cysteine ligase TERM 520 433462 - 433441 - f 100 -8.7 -5.4251 | CTCAGATAGAAAAAA GCCACACTA AAAT TTGTGTGGC TGAATAAATTCTATA TERM 521 433679 - 433668 - g 70 -5.8 -4.42667 | opp_overlap 433667 433675 433676, overlap 433660 CTAAAACGATGAAAA CACC CTCT GGTG ATACTATTACCGTTT luxS 433589 - 434104 + | S-ribosylhomocysteine lyase (autoinducer-2 production protein) TERM 522 434127 - 434167 + T 82 -7.8 -4.58773 | opp_overlap 434127 TGCTTTATAGATAAA GAGACAATAACTCAAG CTATTTGCT CTTGATTTGTTGTCTC TTTTAATTTGATGGG PMI0380 435509 - 434235 - | transporter of ion substrates PMI0381 436345 - 435545 - | hypothetical protein TERM 523 436452 - 436425 - H 77 -9.2 -3.22388 | overlap 436432 TATTGAAGTCATTAA GCGTAAATCTCT ATGC AGAGATCTGCGC GTCATCGTGATATAA TERM 524 436733 - 436719 - g 72 -10 -2.64773 | opp_overlap 436717, overlap 436718 436717 GAAGTTAACAAAAGT CTGACC CCA GGTCAG GAATTTGTCAAAATT TERM 525 437558 - 437546 - g 72 -3.4 -5.05577 | AAAGCAAATGAAAAA CATG GGGGG CATG GCGAGTATGCTAAGT ffh 436518 - 437879 + | signal recognition particle protein TERM 526 437993 - 437960 - f 74 -9.6 -2.62184 | opp_overlap 437960, overlap 437963 GGGCTTTTTATATGA CAACCGGACGCCAT TCCTCG ATGGGGTCTGGTTG TTTTGTTAACTAATG TERM 527 437960 - 437993 + F 100 -12.5 -4.69053 | opp_overlap 437960 437963 GGGCTTTTTATATGA CAACCGGACGCCATT CCTC GATGGGGTCTGGTTG TTTTGTTAACTAATG rpsP 438017 - 438265 + | 30S ribosomal protein S16 rimM 438284 - 438829 + | 16S rRNA processing protein TERM 528 438965 - 438993 + G 72 -8.9 -3.29144 | overlap 438971 CATGGTCTGCTGAAT GTGGAATGTTGGG ATC CCCGAGATTTCAC TTATGACAGACATCA trmD 438869 - 439621 + | tRNA (guanine-N1)-methyltransferase TERM 529 439625 - 439639 + F 74 -8.6 -3.31196 | opp_overlap 439614 ACAGCAGAGTAAGTC TGACAC AAA GTGTCA TTAATATCAGTTTAC rplS 439674 - 440027 + | 50S ribosomal subunit protein L19 TERM 530 440079 - 440062 - f 100 -12.7 -4.1196 | opp_overlap 440062 AAGTTATGGTTAAAA GGCCAGC ATCA GCTGGCC TTTTTTTGACTATAA TERM 531 440062 - 440079 + F 100 -12.7 -5.50499 | opp_overlap 440062 AAGTTATGGTTAAAA GGCCAGC ATCA GCTGGCC TTTTTTTGACTATAA aroF 440479 - 441573 + | phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive TERM 532 441642 - 441629 - g 71 -5.3 -4.61747 | opp_overlap 441629 TGAAGAATTACAAAA TTTGC GAGA GCAAA TTGATCAGGTGGATA tyrA 441609 - 442733 + | T-protein [includes: chorismate mutase and prephenate dehydrogenase] TERM 533 442780 - 442802 + F 100 -7.1 -5.8901 | opp_overlap 442780 TTATAGTAAGAAAAA CGAATGACA GGTTA TGTTATTCG TTTTTTATTTTATAT TERM 534 442802 - 442780 - f 79 -4.9 -5.16841 | opp_overlap 442780 TTATAGTAAGAAAAA CGAATGACA GGTTA TGTTATTCG TTTTTTATTTTATAT TERM 535 443532 - 443542 + F 79 -2.6 -5.7827 | AAAGTGCTAACGATT TAAT TGT ATTA TTTTTTATTTCTATT dcuB 443581 - 444924 + | anaerobic C4-dicarboxylate transporter TERM 536 444996 - 444962 - T 85 -10.9 -3.1919 | opp_overlap 444962 444967, overlap 444967 AGAGTCATAAAAGTA GAAAAGCCAGATAAC AATAA GCTATCTGGCTTTTG GTTATAAAGTAGGGT TERM 537 444967 - 444991 + T 88 -8.6 -4.49389 | opp_overlap 444967 444962, overlap 444962 CATAAAAGTAGAAAA GCCAGATAAC AATAA GCTATCTGGC TTTTGGTTATAAAGT TERM 538 444991 - 444967 - T 100 -10.8 -4.70046 | opp_overlap 444962 444967, overlap 444962 CATAAAAGTAGAAAA GCCAGATAAC AATAA GCTATCTGGC TTTTGGTTATAAAGT pheA 446175 - 445018 - | P-protein [includes: chorismate mutase and prephenate dehydratase] TERM 539 445686 - 445699 + g 73 -6.7 -4.20084 | AAACATCATTAATTG CACCA GAGC TGGTG TTTTCAATAGGTAGT TERM 540 446218 - 446239 + r 77 -8.7 -3.62762 | opp_overlap 446220, overlap 446220 CCATTTTAAATAAAA AAGCCTCCA TTTT TGGAGGCTA TTGTCGTTCTTACTT TERM 541 446237 - 446220 - R 100 -11.3 -5.64421 | opp_overlap 446218 446220 ATTTTAAATAAAAAA GCCTCCA TTTT TGGAGGC TATTGTCGTTCTTAC TERM 542 446220 - 446237 + r 90 -11.3 -3.37831 | opp_overlap 446220, overlap 446218 ATTTTAAATAAAAAA GCCTCCA TTTT TGGAGGC TATTGTCGTTCTTAC TERM 543 446432 - 446414 - R 100 -10.3 -5.35365 | AAAATACAATAAAAA GCGCATC ACGAG GATGCGC AGAGGCGTTTTGAGT PMI0391 446820 - 446485 - | sigma 54 modulation protein TERM 544 447052 - 447070 + r 100 -10.3 -4.77036 | opp_overlap 447052 ATTAGCATAAAAAAA CAGCAGC GCTAG GCTGCTG TTTTTGATAGTAAAA TERM 545 447070 - 447052 - R 100 -10.3 -5.67967 | opp_overlap 447052 ATTAGCATAAAAAAA CAGCAGC GCTAG GCTGCTG TTTTTGATAGTAAAA PMI0392 447824 - 447090 - | lipoprotein TERM 546 447923 - 447913 - H 79 -8.2 -4.07246 | TCATTTTAAATGAAA CGGC TGT GCCG TCAAAATACTAACTT rluD 447955 - 448932 + | ribosomal large subunit pseudouridine synthase D TERM 547 449389 - 449411 + G 70 -9.2 -3.09831 | overlap 449398 AAGATTATGGCGTGG TTAGGGCC AGCAATA GGCCCTAA TGCTTTTGAAGTAGG PMI0394 448933 - 449664 + | hypothetical protein TERM 548 449716 - 449737 + F 83 -10.3 -3.23183 | opp_overlap 449704 449709, overlap 449709 TAGGCAAATATTTTT GCTCAAAAT TGTC ATTTTGAGC TTGAATATTGTCTAA TERM 549 450920 - 450933 + G 71 -6.7 -4.11235 | ACGGATCCGGCGATT GTAGC AGCA GCTAC TTTGTCTCATCGTTA clpB 449810 - 452386 + | chaperone ClpB (heat-shock protein F84.1) TERM 550 452463 - 452432 - T 100 -13.2 -2.85346 | opp_overlap 452439, overlap 452439 AAGATGTCATTAAAT TGAAAAAGAGGCCT GAAT AGGCCTCTTTTTTA TGCCTGCAGTTTTGT TERM 551 452439 - 452456 + T 100 -11.3 -5.28176 | opp_overlap 452439 452432 CATTAAATTGAAAAA GAGGCCT GAAT AGGCCTC TTTTTTATGCCTGCA TERM 552 452456 - 452439 - T 100 -11.3 -4.82855 | opp_overlap 452439, overlap 452432 CATTAAATTGAAAAA GAGGCCT GAAT AGGCCTC TTTTTTATGCCTGCA TERM 553 454474 - 454491 + T 74 -9.1 -3.07291 | opp_overlap 454474 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 554 454754 - 454736 - T 77 -4.6 -5.27335 | overlap 454737 TTGCCTAAAGAAAAA GCTTCTTA TTA TAAGAAGA AAAAGGAGTGGTTAT TERM 555 454753 - 454737 - T 75 -8.1 -3.75678 | overlap 454736 TGCCTAAAGAAAAAG CTTCTTA TTA TAAGAAG AAAAAGGAGTGGTTA TERM 556 454995 - 454971 - T 70 -4.4 -4.75954 | opp_overlap 454967 AAAATTGAAAACAAA TCAATATATC ACCGA GGTATATTGA TGAGTCTCTCAAAAT TERM 557 455332 - 455346 + T 71 -8.6 -2.92371 | opp_overlap 455329 455332 GAATGGGGAAACCCA GTATCC AAT GGATAC TATCATTAACTGAAT TERM 558 455695 - 455683 - T 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 559 456666 - 456648 - T 87 -10.3 -3.57798 | overlap 456661 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 560 458404 - 458382 - T 87 -11.4 -3.11951 | overlap 458378 458380 458401 CGAGTAATAGACAGA CCAGTTTGTC TGG AACAAACTGG AACAGTGCGGAGCAC TERM 561 458427 - 458401 - T 82 -8.6 -4.15044 | overlap 458382 458380 TTTGTCTGGAACAAA CTGGAACAGTGC GGA GCACTGGCCCCG AAGGGGTGAGTCTCA TERM 562 458600 - 458648 + T 85 -4.8 -5.56673 | gap 2, opp_overlap 458614, overlap 458614 AACTGCCAAGCATTA AATAAGACG--AGAAAGCCAACCC AAT GGGTTGGCTTTTTTGCGTTTGATA TTTTTTATTCTCAAT TERM 563 458614 - 458632 + T 100 -14.6 -5.22943 | opp_overlap 458614, overlap 458600 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCGTTTGAT TERM 564 458632 - 458614 - T 100 -14.6 -4.11081 | opp_overlap 458614 458600 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCGTTTGAT PMI0396 459036 - 458689 - | hypothetical protein TERM 565 459131 - 459153 + r 100 -13.6 -3.3854 | opp_overlap 459131 TATAGCGACAAAAAA GCCTTACTTA TTT TAAGTAAGGC TTATAAATAGTGCTT TERM 566 459153 - 459131 - R 100 -13.6 -5.29782 | opp_overlap 459131 TATAGCGACAAAAAA GCCTTACTTA TTT TAAGTAAGGC TTATAAATAGTGCTT pssA 460545 - 459184 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 567 459274 - 459305 + g 87 -5.3 -5.39721 | overlap 459252 459276 GTAAAATTTAATACT CTCTAATTGTTGA TAGCTT TTAACAATTAGTG TTTTTTCTCTGATAC TERM 568 459276 - 459303 + g 74 -6.5 -4.32846 | overlap 459252 459274 AAAATTTAATACTCT CTAATTGTTGA TAGCTT TTAACAATTAG TGTTTTTTCTCTGAT TERM 569 459540 - 459530 - G 75 -5.4 -4.73613 | opp_overlap 459530 TCATTATCAATAAAA CGTT GAA AACG TTGGGTGAATTTACG TERM 570 460568 - 460586 + r 73 -7.5 -3.58905 | ATTTCTCTTGTTTAT GATGACT AAAAG AGTCATC TTCTATGTAAAAAAT PMI0398 463391 - 460731 - | acyl-CoA synthetase/acetyltransferase TERM 571 462020 - 462047 + g 82 -7.8 -4.58698 | TGTTCATTTTTATTT CTAAAGGTAATG CCGG CGTTTCCTTTAG TTGTTTTTGGTTTCG TERM 572 462654 - 462671 + g 72 -3.4 -5.0916 | opp_overlap 462643 ATAACTTGGCGTATC GCCTAA GAGTAA TTGGGC TTTTTGTGTTCGACC TERM 573 463121 - 463097 - G 73 -8 -3.90922 | gap 1, opp_overlap 463076 463094 463104, overlap 463100 ATTGTGCTGAAAGAA CAATCACGGCT TTAC AGCC-TGATTG ACCTAATTGCTCAAG PMI0399 464119 - 463436 - | hypothetical protein PMI0400 464257 - 465315 + | hypothetical protein PMI0401 465490 - 466593 + | tRNA/rRNA methyltransferase TERM 574 466621 - 466666 + T 100 -10 -5.38326 | gap 2, opp_overlap 466621 TAGATGATTTAAAAA TCCCGCTGAATA--ATGAACTG CAGT CAGTTCACCATGTTCAGCGGGA TTTTTCTTTAATTAA TERM 575 466666 - 466621 - T 100 -12.2 -4.69664 | gap 2, opp_overlap 466621 TAGATGATTTAAAAA TCCCGCTG-A-ATAATGAACTG CAGT CAGTTCACCATGTTCAGCGGGA TTTTTCTTTAATTAA emrB 468239 - 466701 - | MFS-family transporter TERM 576 467608 - 467624 + g 73 -7.3 -4.13183 | opp_overlap 467608, overlap 467604 ACCAATAGTACGAGA CCAATGG TAT CTATTGG TTTAATTTCCGTTTT TERM 577 468143 - 468188 + g 70 -5.6 -4.37527 | gap 2, opp_overlap 468143 468154 468155, overlap 468155 TTGTTGAATCGAGAA CTTGCATAAAAGTGGCCAGCGC AAGT GCGATGGTCA-TTATA-GCAAG TTTTCCTCCTTGTAA TERM 578 468155 - 468178 + g 70 -8.8 -3.33009 | opp_overlap 468155 468154 468143, overlap 468143 GAACTTGCATAAAAG TGGCCAGCGC AAGT GCGATGGTCA TTATAGCAAGTTTTC emrA 469411 - 468236 - | multidrug resistance protein A TERM 579 469485 - 469440 - R 100 -10 -5.43621 | opp_overlap 469446, overlap 469441 469444 ATAAACCAGAAAAAA GCATTATATATGTTTCCAGA ATAAAA TCCGGAAACATATATATTGG GCTTATATTAGAATA TERM 580 469484 - 469441 - R 100 -13.5 -3.83732 | opp_overlap 469446, overlap 469440 469444 TAAACCAGAAAAAAG CATTATATATGTTTCCAGA ATAAAA TCCGGAAACATATATATTG GGCTTATATTAGAAT TERM 581 469481 - 469444 - R 100 -13.8 -2.6676 | opp_overlap 469446, overlap 469441 469440 ACCAGAAAAAAGCAT TATATATGTTTCCAGA ATAAAA TCCGGAAACATATATA TTGGGCTTATATTAG TERM 582 469446 - 469479 + r 76 -9.8 -3.12407 | opp_overlap 469444 469441 469440 CAGAAAAAAGCATTA TATATGTTTCCAGA ATAAAA TCCGGAAACATATA TATTGGGCTTATATT PMI0404 470237 - 469587 - | GntR-family transcriptional regulator TERM 583 469613 - 469660 + g 82 -10.8 -3.53811 | overlap 469614 469616 469618 CAATGCCTCTTGCTC TTAGGCTACGTTTACTAGATGT AATG GTATCTAGTAAACGGAGTCTAC TTTCGCACAAATGAG TERM 584 469614 - 469659 + g 93 -14.3 -2.72144 | overlap 469613 469616 469618 AATGCCTCTTGCTCT TAGGCTACGTTTACTAGATGT AATG GTATCTAGTAAACGGAGTCTA CTTTCGCACAAATGA TERM 585 469616 - 469657 + g 83 -12.5 -2.90615 | overlap 469614 469613 469618 TGCCTCTTGCTCTTA GGCTACGTTTACTAGATGT AATG GTATCTAGTAAACGGAGTC TACTTTCGCACAAAT TERM 586 469618 - 469655 + g 81 -11.5 -3.00525 | overlap 469616 469614 469613 CCTCTTGCTCTTAGG CTACGTTTACTAGATGT AATG GTATCTAGTAAACGGAG TCTACTTTCGCACAA PMI0405 470323 - 471525 + | MFS-family transporter TERM 587 471984 - 472001 + G 77 -6.3 -4.55118 | gap 1, opp_overlap 471967, overlap 471983 TGATCCTTGCAGGAG TCACGACC AGT GG-CGTGA TTTTATCTACAGTTA TERM 588 472079 - 472091 + G 79 -3.4 -5.52384 | TGTGCCGATCCTGAT CATG ACACA CATG TTTTTTTACTCGAGA PMI0406 471566 - 472168 + | hydrolase emrR 472898 - 472371 - | MarR-family transcriptional regulator TERM 589 472994 - 473006 + r 75 -2.7 -5.68023 | GCAATTTTTATTATT TATAG TCA CTATG TTTTTTTGATTATGC PMI0408 474611 - 473391 - | MFS-family transporter TERM 590 475236 - 475203 - g 85 -6.7 -5.06585 | opp_overlap 475203 CAAAGCACAGAAAAA GCATCACAGACTCAA CAAT CTGAAACTGTGGTGC TTGATCCTATTTATG PMI0409 474978 - 477371 + | TonB-dependent receptor TERM 591 477432 - 477408 - T 100 -10.1 -6.12328 | opp_overlap 477408 ATAAGATAAAAAAAA GCAGAGCAT ATTAATA ATGCTCTGC TTTGACGTTATTTAA TERM 592 477408 - 477432 + T 86 -10.1 -3.74238 | opp_overlap 477408 ATAAGATAAAAAAAA GCAGAGCAT ATTAATA ATGCTCTGC TTTGACGTTATTTAA proX 478455 - 477460 - | glycine betaine/L-proline ABC transporter, substrate-binding protein TERM 593 477647 - 477660 + g 80 -2.3 -5.63517 | overlap 477644 TTAGCAGCAGCAGGG TTGGC TTCG GCCCA TTTTTTATTTGCCGC TERM 594 478480 - 478521 + r 78 -9.7 -3.25652 | gap 1, overlap 478483 TTCTGTTGTGATGGG TAAGAGATAATAGTCGC-TG TGT CGTGCTACTGTTATCTCTTA TATTAATTGAATAAA proW 479804 - 478575 - | glycine betaine/L-proline ABC transporter, permease protein proV 480996 - 479797 - | glycine betaine/L-proline ABC transporter, ATP-binding protein TERM 595 481249 - 481233 - R 77 -3 -5.57054 | overlap 481234 AAGAAGTCAAAAAAA CCATAC TAACT GTATGA AATAACATTATTTTT TERM 596 481540 - 481508 - R 100 -10.1 -5.38326 | opp_overlap 481508 481509, overlap 481509 TCAAGCAAATAAAAA GGCACTAAAAAATAA GTT TTATTTTTCAGTGCA TTATATTAATTGATT TERM 597 481508 - 481540 + r 74 -7.9 -3.77721 | opp_overlap 481508 481509, overlap 481509 TCAAGCAAATAAAAA GGCACTAAAAAATAA GTT TTATTTTTCAGTGCA TTATATTAATTGATT TERM 598 481509 - 481539 + r 86 -11.4 -2.85548 | opp_overlap 481508 481509, overlap 481508 CAAGCAAATAAAAAG GCACTAAAAAATAA GTT TTATTTTTCAGTGC ATTATATTAATTGAT TERM 599 481539 - 481509 - R 100 -13.6 -3.81369 | opp_overlap 481509 481508, overlap 481508 CAAGCAAATAAAAAG GCACTAAAAAATAA GTT TTATTTTTCAGTGC ATTATATTAATTGAT nrdF 482573 - 481605 - | ribonucleoside-diphosphate reductase beta chain TERM 600 482331 - 482352 + g 71 -5.1 -4.5954 | opp_overlap 482334, overlap 482334 CTGAGCATCAGGCAT TAAGGTTGG TGCC CCGACCGTA TTTTGTATCGTATCG nrdE 484725 - 482599 - | ribonucleoside-diphosphate reductase alpha chain nrdI 485158 - 484754 - | NrdI protein nrdH 485394 - 485170 - | glutaredoxin-like protein TERM 601 485439 - 485414 - H 80 -6.2 -4.8543 | TAACCCTTATAAAAA TGTGAATGTG TCTGCT CACAGTCACA ATGAAAAGTACTTAA TERM 602 485487 - 485500 + H 85 -3.1 -5.95286 | ATTCTTTTTCAACCA CACTA GATA TGGTG TTTTTTATTTTTGAT ogt 485676 - 486149 + | methylated-DNA--protein-cysteine methyltransferase TERM 603 486304 - 486318 + F 80 -5.7 -4.93812 | opp_overlap 486299 486304 TTTTACTATAGCCAA CGCAA AACGC TTGCG TTTATTTTCTATTTT cspE 486347 - 486556 + | cold shock protein TERM 604 486631 - 486594 - T 100 -15.7 -3.55203 | opp_overlap 486595, overlap 486595 486597 AAAACGTTTTTGAAA TGACCCCCAATAGTTGG ACAA CCAATTATTGGGGGTCT TTTTATGTCAAATAC TERM 605 486630 - 486595 - T 100 -19.2 -2.7264 | opp_overlap 486595, overlap 486594 486597 AAACGTTTTTGAAAT GACCCCCAATAGTTGG ACAA CCAATTATTGGGGGTC TTTTTATGTCAAATA TERM 606 486595 - 486630 + T 100 -21.4 -4.9792 | opp_overlap 486595 486594 486597 AAACGTTTTTGAAAT GACCCCCAATAGTTGG ACAA CCAATTATTGGGGGTC TTTTTATGTCAAATA TERM 607 486628 - 486597 - T 100 -16 -2.90615 | opp_overlap 486595, overlap 486595 486594 ACGTTTTTGAAATGA CCCCCAATAGTTGG ACAA CCAATTATTGGGGG TCTTTTTATGTCAAA crcB 487388 - 487014 - | membrane protein (protein CrcB) TERM 608 487166 - 487152 - G 83 -7.1 -4.72556 | overlap 487165 GGAAAAAGTAGAAAA GGTGG TTAAG CCACC ACAAAAACCTGTGGT lipA 488369 - 487404 - | lipoic acid synthetase lipB 489115 - 488471 - | lipoyltransferase TERM 609 489267 - 489295 + r 90 -8.2 -4.90778 | opp_overlap 489259 489258 GATTAACCAAGCAGT GCTTAATTGGCG ATTAA CCCCAATTAGGC TTTTATTTAAGTGAG PMI0422 489733 - 489467 - | hypothetical protein TERM 610 489834 - 489806 - R 100 -10.3 -5.40464 | opp_overlap 489800, overlap 489807 CAGCACAAATAAAAA GCGCATTCCTCCT ATA ATGAGGAATGCGA TACTGATAGTTAGGG TERM 611 489833 - 489807 - R 100 -13.8 -3.82652 | opp_overlap 489800, overlap 489806 AGCACAAATAAAAAG CGCATTCCTCCT ATA ATGAGGAATGCG ATACTGATAGTTAGG dacA 491140 - 489929 - | penicillin-binding protein TERM 612 490065 - 490076 + g 72 -4.4 -4.7497 | opp_overlap 490060, overlap 490060 TGGAAATTAATGGTG CCAA CCAC TTGG TTTTTACTGACTGGC TERM 613 490775 - 490759 - G 72 -8.7 -3.60792 | opp_overlap 490758 GTGTTAATTGTGAAA CGGTGAC TTT ATCACCG GGTTTTAAAAACATT TERM 614 490873 - 490845 - G 70 -9 -3.13403 | opp_overlap 490845 490852, overlap 490843 490852 GCTTCTTCACCAATA GGAACAATATCG TTGTT CGATATTTTTCC TGCACGAATGGCTTG TERM 615 490852 - 490866 + g 72 -4.3 -4.72272 | opp_overlap 490845 490843 490852, overlap 490845 CACCAATAGGAACAA TATCG TTGTT CGATA TTTTTCCTGCACGAA rlpA 492280 - 491267 - | rare lipoprotein A precursor TERM 616 491836 - 491848 + g 73 -7.7 -3.8535 | opp_overlap 491836 491835, overlap 491834 AACTGTTATAAACAG CAGGT GTA ACCTG TATTTGTTTGCCTTC TERM 617 491889 - 491905 + g 76 -10.9 -2.60988 | CCACGATCGTTAATT CGCACAA TCA TTGTGCG TCCATTGATTAAGTT rodA 493403 - 492291 - | rod shape-determining protein TERM 618 492652 - 492642 - G 73 -5.4 -4.56597 | opp_overlap 492650 GCGCTCTGGTAAAAA CTCA AGT TGAG ACTGAGTCCCTTGTA TERM 619 492907 - 492893 - G 75 -2.8 -5.29716 | GGAAGATAACAAAAA TTCCTG AAG CAGCAA TTAAAATAGAGGTAC pbpA 495303 - 493408 - | penicillin-binding protein TERM 620 493782 - 493794 + g 70 -9.1 -3.23335 | overlap 493777 493777 AACCGGAGTTGATAT CGCCA ATT TGGCG TGTCTCTTTATCCAC TERM 621 493961 - 493974 + g 93 -6.7 -5.42131 | opp_overlap 493947, overlap 493948 493952 ACAGGGATGGTATCC CCTTG ATAC CAAGG TTTTTTATATCGTTG TERM 622 494921 - 494934 + g 82 -8.1 -4.62069 | opp_overlap 494906 494919, overlap 494918 GAACTAAAACGACGA GAGCG TTTT CGCTC TTTTTCAAATGCAGC PMI0427 495811 - 495341 - | hypothetical protein TERM 623 495754 - 495777 + g 84 -8 -4.82901 | opp_overlap 495755, overlap 495755 TAAGATAATCCATAA AGCCGGTCTG GATC CAGTCCGGCA TTTTTGTACCAACGG TERM 624 495755 - 495776 + g 88 -11.5 -3.49419 | opp_overlap 495755, overlap 495754 AAGATAATCCATAAA GCCGGTCTG GATC CAGTCCGGC ATTTTTGTACCAACG TERM 625 495776 - 495755 - G 90 -11.5 -4.0174 | opp_overlap 495755 495754 AAGATAATCCATAAA GCCGGTCTG GATC CAGTCCGGC ATTTTTGTACCAACG PMI0428 496131 - 495814 - | hypothetical protein PMI0429 496531 - 497286 + | hypothetical protein nadD 497971 - 497300 - | nicotinate-nucleotide adenylyltransferase TERM 626 497453 - 497437 - G 79 -5.1 -5.15167 | overlap 497431 TATCAGCAAGAAAAA TTTTCCC GGC GGGTAAA CAGTGAATATCTGCT TERM 627 497890 - 497866 - G 73 -7.1 -3.98826 | opp_overlap 497848 CTATCAAGCCAGAAA GGGCTTCTACA GGA CGTAAATGCCC ATAATGGATCGGATC holA 498998 - 497964 - | DNA polymerase III delta subunit TERM 628 498944 - 498969 + g 72 -8.9 -3.31443 | opp_overlap 498940, overlap 498940 498937 AAAGTAGGTAACTTT GGCGCAACCCC TCTT GGAGTTGCGCA TTAAGTTGTTCTGGA rlpB 499543 - 498995 - | rare lipoprotein B TERM 629 499287 - 499297 + g 75 -5.4 -4.77173 | opp_overlap 499287 CCGTCTTGATACACA GAGA CAG TCTC TTTATTTTCTGAAGA leuS 502138 - 499556 - | leucyl-tRNA synthetase TERM 630 502396 - 502412 + r 85 -8.1 -4.41633 | TGCTACTGTGTTGCG TCATCAA AGG TTGATGA TTATTTTTAGCGATA gltL 503223 - 502498 - | glutamate/aspartate ABC transporter, ATP-binding protein TERM 631 502829 - 502866 + g 76 -7.1 -4.18161 | gap 1 AGTTGAGCAGGGTAT TTATTAGCGTG-GTTGGC TAA GCCTACGCGCTCTAATAA TTTTAGCCCTTTCTC gltK 503898 - 503224 - | glutamate/aspartate ABC transporter, permease protein TERM 632 503484 - 503463 - G 73 -6.7 -4.18197 | gap 1, opp_overlap 503463 503458 ATGCTTGAGGTAAAA TCACTAAACG CAT CGTTT-GTGA TTTTGTCATTCCTAA TERM 633 503463 - 503484 + g 79 -6.7 -4.56607 | gap 1, opp_overlap 503463, overlap 503458 ATGCTTGAGGTAAAA TCACTAAACG CAT CGTTT-GTGA TTTTGTCATTCCTAA gltJ 504638 - 503898 - | glutamate/aspartate ABC transporter, permease protein TERM 634 504657 - 504641 - R 74 -9.5 -2.67477 | AATCAATCGACATGA TTTCACC TCC GGTGAAA AAAATGGGGCAGGGA TERM 635 504684 - 504662 - R 100 -10.6 -5.40072 | CTCCGGTGAAAAAAA TGGGGCAG GGAACGG CTGCCCCA AACTTCACTGATCTG gltI 505650 - 504757 - | glutamate/aspartate ABC transporter, substrate-binding protein TERM 636 505412 - 505425 + g 87 -5.3 -5.50723 | AGACGAACTTGTAGG TTAGG TTTG CCTAA TTTTTCTTTTACTGC TERM 637 506247 - 506259 + G 79 -3.3 -5.37345 | TCGATTCCTCCTTTA GCGAT TGA ACCGC TTTTTTATACTTGGG PMI0438 505995 - 506396 + | metal resistance protein TERM 638 507906 - 507925 + G 73 -7.2 -4.07455 | GTAAATGGATGAATC GCCTAAGA GTTG TTTTAGGC TTTATGATGTTGCTA PMI0439 506477 - 508513 + | metal resistance protein PMI0440 508513 - 509244 + | metal resistance protein TERM 639 509321 - 509352 + G 77 -10.1 -3.36538 | overlap 509314 TATTTCATTTGCTAT GGACTGGTGGCGT CAACCA ACGCCACCAGAAC TTACTGATTTATCTA PMI0441 509244 - 509747 + | metal resistance protein PMI0442 510439 - 509756 - | hypothetical protein TERM 640 510373 - 510384 + g 81 -3 -5.54264 | ATCCTTTTGTTTCAT TATC GGCA GATA TTTTTTTCGCTCTTT cutE 512039 - 510516 - | apolipoprotein N-acyltransferase (copper homeostasis protein) TERM 641 510992 - 510975 - G 78 -2.6 -5.38497 | overlap 510977 AGGTAAATTAAAAAA TGGCGC TAATGG GCGCAA TAAGGACTCTAAAGG TERM 642 511347 - 511373 + g 77 -8.8 -3.86653 | overlap 511351 TTTTAATGATTGCGC GATATTGCCTTG AAC TAAGGCAATTTC TTGTGTTTCATCAGT TERM 643 511351 - 511369 + g 82 -8.2 -4.53047 | overlap 511347 AATGATTGCGCGATA TTGCCTTG AAC TAAGGCAA TTTCTTGTGTTTCAT TERM 644 511810 - 511798 - G 75 -7.7 -4.08767 | GGCATTCCCCCAAAA TCAGC AAT GCTGA CATATACCCAGTTTA TERM 645 511977 - 511959 - G 81 -7.4 -4.51799 | ATCAAAGGGAGAAAA TGCGAGTG TGC CACTGGCA CCGAAAAAAACCGCC TERM 646 512016 - 511988 - G 100 -15.4 -5.47218 | gap 1, opp_overlap 511988 TGGCACCGAAAAAAA CCGCCAGTAGGGT GCGA ACCC-ACTGGCGG TTTAATAAAGAGAAA TERM 647 511988 - 512016 + g 100 -15.4 -3.72576 | gap 1, opp_overlap 511988 TGGCACCGAAAAAAA CCGCCAGTAGGGT GCGA ACCC-ACTGGCGG TTTAATAAAGAGAAA corC 512928 - 512047 - | magnesium and cobalt efflux protein PMI0445 513466 - 512999 - | hypothetical protein TERM 648 513400 - 513418 + g 84 -10.3 -3.8398 | opp_overlap 513399 513398 GCCAAGTGATAAATT GGGCTTC ACTCG GAAGCCC TTGTGTATTTTCAGT PMI0446 514520 - 513459 - | PhoH-like ATP-binding protein miaB 515979 - 514549 - | MiaB protein (methylthiolation of isopentenylated A37 derivatives in rRNA) TERM 649 515545 - 515527 - G 81 -7.4 -4.64048 | CATGATAGAAACAAA TGCAGAAG GGC CTTCAGCA CGAGGTTCAGGTAGA ubiF 516195 - 517379 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase PMI0449 518258 - 517428 - | esterase TERM 650 517718 - 517730 + g 70 -9.1 -3.20723 | overlap 517721 CGCTAAAGGCTTTTT GTCCC CAA GGGAC TTGGGTTGGTGCAAC TERM 651 517721 - 517735 + g 75 -10 -3.14564 | overlap 517718 TAAAGGCTTTTTGTC CCCAAG GGA CTTGGG TTGGTGCAACAATGG TERM 652 518306 - 518279 - R 82 -7.8 -4.44667 | overlap 518280 CTCCTTAACAACAAA GTCAGACCTATT TGAT AATAGGCCTGAG AGTGATTAATCGAAA TERM 653 518305 - 518280 - R 88 -11.3 -3.26318 | overlap 518279 TCCTTAACAACAAAG TCAGACCTATT TGAT AATAGGCCTGA GAGTGATTAATCGAA adhC 519424 - 518312 - | alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) PMI0451 519719 - 519444 - | hypothetical protein TERM 654 519920 - 519951 + r 86 -10.2 -3.76321 | opp_overlap 519920 519927, overlap 519916 519924 519927 ATTTAAGGCTAAAAA CAAAAAAGACCCGC CATA GCGAGTCTTGTTTG TTGATTTTAATTAGT TERM 655 519951 - 519920 - R 100 -12.4 -4.67234 | opp_overlap 519920 519916 519924 519927, overlap 519927 ATTTAAGGCTAAAAA CAAAAAAGACCCGC CATA GCGAGTCTTGTTTG TTGATTTTAATTAGT TERM 656 519927 - 519944 + r 74 -6.9 -4.31459 | opp_overlap 519920 519927, overlap 519924 519920 519916 GCTAAAAACAAAAAA GACCCGC CATA GCGAGTC TTGTTTGTTGATTTT TERM 657 519944 - 519927 - R 100 -9.1 -5.93252 | opp_overlap 519927 519924 519920 519916, overlap 519920 GCTAAAAACAAAAAA GACCCGC CATA GCGAGTC TTGTTTGTTGATTTT TERM 658 520089 - 520109 + r 73 -8.3 -3.37487 | opp_overlap 520091, overlap 520087 520091 AACCTTTGAGAAAAA AAGACTCGT TTA ACGAGTCTC TCTTTCAGAATATGG TERM 659 520107 - 520091 - R 100 -10.9 -5.60993 | opp_overlap 520089 520087 520091 CCTTTGAGAAAAAAA GACTCGT TTA ACGAGTC TCTCTTTCAGAATAT TERM 660 520091 - 520107 + r 85 -10.9 -3.25472 | opp_overlap 520091, overlap 520089 520087 CCTTTGAGAAAAAAA GACTCGT TTA ACGAGTC TCTCTTTCAGAATAT TERM 661 520332 - 520370 + r 87 -11.7 -2.53911 | opp_overlap 520321 520322 AATATGGCTGGGGTA CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG TGCCTTACCGCTTGG TERM 662 521025 - 520987 - R 78 -9 -3.48276 | opp_overlap 520992, overlap 520992 GTGGTGGTGACATAA TAAAACAACGCACAGTTA TTT TAGCTGCACGTTGTTTTT TAAACAAAGATGACT TERM 663 521020 - 520992 - R 93 -8.9 -4.84311 | opp_overlap 520992, overlap 520987 GGTGACATAATAAAA CAACGCACAGTTA TTT TAGCTGCACGTTG TTTTTTAAACAAAGA TERM 664 520992 - 521020 + r 85 -6.7 -5.00616 | opp_overlap 520992 520987 GGTGACATAATAAAA CAACGCACAGTTA TTT TAGCTGCACGTTG TTTTTTAAACAAAGA nagC 522356 - 521124 - | N-acetylglucosamine regulatory protein TERM 665 521581 - 521565 - G 76 -7.3 -4.14764 | CTCTAAACAACCAAA GTTACCA CAG TGGCAAC GCTCTCCTAATGGAT nagA 523529 - 522366 - | N-acetylglucosamine-6-phosphate deacetylase TERM 666 522631 - 522643 + g 77 -6.3 -4.56597 | opp_overlap 522641 ACACACAGCCCATTG CGATA ATA TATCG TTTTTCCAGCAAAAA TERM 667 523598 - 523573 - R 88 -12 -2.93785 | overlap 523570 AATCTAAAAAACCGA TATCAGCCAG CAAATT CTGGCTGATA AGTAAGAGAGCTTAG nagB 524458 - 523652 - | glucosamine-6-phosphate deaminase TERM 668 524208 - 524183 - G 75 -2.6 -5.2112 | AATATGATTAAAAAA GTTCTCATAC ATAAAA GTACGATAAC TTTGTGGGTGATCTG nagE 524804 - 526849 + | N-acetylglucosamine-specific PTS system, EIICBA component TERM 669 526905 - 526927 + T 100 -7.7 -5.65177 | opp_overlap 526900 526905 AATAAGACGATAAAA CGGGGAGTG TTGTC TACTTCCCG TTTTTTTATCCCTAT PMI0456 528078 - 527077 - | integrase TERM 670 527282 - 527300 + gT 71 -5.2 -4.54047 | overlap 527283 CCTCTTAATGTTTTT GCTGTGGT ATT GCCACAGA TTTTATCTGAGCTCC TERM 671 527283 - 527299 + gT 74 -8.7 -3.31946 | overlap 527282 CTCTTAATGTTTTTG CTGTGGT ATT GCCACAG ATTTTATCTGAGCTC PMI0456A 528280 - 528035 - | excisionase PMI0457 528615 - 528277 - | phage recombination protein TERM 672 528317 - 528337 + g 87 -6.1 -5.33405 | opp_overlap 528317, overlap 528318 ATCATTAAAAAAACT TCCATAGCG CCA CGGTATGGG TTTTTATTTACTGAC TERM 673 528506 - 528518 + g 74 -6.3 -4.38369 | opp_overlap 528505 528506 CCATCAACAAGGAAT TGGAT AAT ATCCA TTGTTTGTTTAATTA PMI0458 528784 - 528608 - | hypothetical protein PMI0459 528935 - 528774 - | hypothetical protein TERM 674 528983 - 528968 - R 100 -10.4 -5.28176 | opp_overlap 528969 TTTAGGTATAAAAAA CCCTGC ACTA GCAGGG TGGGTAATTAATAAT PMI0460 529716 - 528991 - | hypothetical protein PMI0461 530281 - 529745 - | hypothetical protein PMI0462 530467 - 530288 - | hypothetical protein PMI0463 530689 - 530495 - | hypothetical protein PMI0464 530905 - 530729 - | hypothetical protein recT 532226 - 531420 - | phage DNA recombinase PMI0468 533037 - 532219 - | phage-related exonuclease PMI0469 533288 - 533034 - | hypothetical protein PMI0470 533548 - 533285 - | hypothetical protein PMI0471 533711 - 533556 - | hypothetical protein PMI0472 534027 - 533800 - | hypothetical protein PMI0473 534425 - 534150 - | hypothetical protein TERM 675 534773 - 534785 + G 73 -6.9 -4.2558 | opp_overlap 534768 AAAAAAGAGACTCCA CCTCC GAT GGGGG TTTTGCTAAAAAGTA PMI0474 534593 - 534808 + | hypothetical protein PMI0475 535020 - 534805 - | hypothetical protein TERM 676 535158 - 535143 - R 100 -8.2 -5.4833 | opp_overlap 535143 535142 TTAGGTAATAAAAAA CCCCGC GGCT GCGAGG CTTTAGATTGATTGG nun 535488 - 535180 - | transcription termination factor PMI0477 535768 - 535490 - | hypothetical protein TERM 677 536264 - 536247 - R 100 -7 -5.60993 | GTGGGCATAAAAAAA TCCCTC ATTAAA GAGGGA ACTGTGATGTGGTAG PMI0478 536596 - 536291 - | hypothetical protein ci 537328 - 536627 - | phage reprossor PMI0480 537436 - 537621 + | phage regulatory protein TERM 678 538033 - 538064 + G 73 -8.7 -3.68341 | opp_overlap 538035, overlap 538035 ATGAAAATAAAAGAA AACGCCTCGATTG CGGCAA CAAACGAGGCGTG TTGTTCAATGGAATT TERM 679 538062 - 538035 - g 100 -12 -5.40279 | opp_overlap 538033 538035 GAAAATAAAAGAAAA CGCCTCGATTGC GGCA ACAAACGAGGCG TGTTGTTCAATGGAA TERM 680 538035 - 538062 + G 85 -11.3 -3.41988 | opp_overlap 538035, overlap 538033 GAAAATAAAAGAAAA CGCCTCGATTG CGGCAA CAAACGAGGCG TGTTGTTCAATGGAA PMI0481 537742 - 538089 + | phage regulatory protein TERM 681 538132 - 538147 + F 100 -7.6 -5.52384 | opp_overlap 538131 GTTTTTATCACAAGG GGAAAC TTCA GTTTCC TTTTTTTGATACAGC TERM 682 538712 - 538694 - g 71 -6.8 -3.9693 | overlap 538681 GAGGTAGTCAAAGAA TTTGACCA CGG TAGTCAAA CGGTTGGACTAGGGG PMI0482 538355 - 539122 + | phage replication protein PMI0483 539122 - 540507 + | phage replicative DNA helicase PMI0484 540533 - 540982 + | phage protein PMI0485 541061 - 541351 + | phage protein PMI0486 541348 - 541704 + | phage holliday junction resolvase PMI0487 541704 - 542336 + | phage antitermination protein Q TERM 683 542414 - 542438 + F 100 -7.2 -5.79526 | gap 1, opp_overlap 542418, overlap 542418 TAAATGTAAGTATTT CAAA-CCTCGC TTCG GCGGGGTTTTG TTTTTTTTAAAATAT TERM 684 542418 - 542433 + F 100 -8.2 -5.66926 | opp_overlap 542418, overlap 542414 TGTAAGTATTTCAAA CCTCGC TTCG GCGGGG TTTTGTTTTTTTTAA PMI0488 542647 - 543168 + | phage membrane protein TERM 685 543209 - 543224 + F 88 -6.8 -5.24989 | opp_overlap 543209 TATAAATTTCTTAAA GATCGC TTAG GCGGTC TTTTTTCGTATATGC TERM 686 543574 - 543588 + G 72 -4.3 -4.67607 | opp_overlap 543574 ATTGGCGCAAAAACA CACAA GAGAG TTGTG TTTATTTGTTAGAGA PMI0489 543327 - 543749 + | phage protein TERM 687 543845 - 543856 + G 86 -7.2 -5.04385 | opp_overlap 543845 ACTTATGGAACAGCA GGCC TAAC GGCC TTTTTTGCCAGTCTC PMI0490 543797 - 544072 + | phage protein TERM 688 544101 - 544091 - g 75 -5.4 -4.78848 | CTCTCAAACAGAAAA TAGC GGC GCTA ACAACAGCAGGAGCA PMI0491 544072 - 544542 + | phage lysozome PMI0491A 544524 - 544682 + | hypothetical protein PMI0492 544685 - 545146 + | phage endopeptidase TERM 689 545173 - 545153 - f 100 -7.6 -6.11243 | gap 1 ATGGAATAAAAAAAA GCCCA-GCA TGGG TGCATGGGC AAACTAACAGGATAT TERM 690 545686 - 545666 - g 79 -10.5 -3.484 | overlap 545660 CTGATGATATGACAA TGGTCACTG AAA CAATGACCA ATGGAATAAACAACA TERM 691 546002 - 545990 - g 70 -3.3 -4.90778 | GTCACCTAAAGAAAA TACGC AAA GCGAA GAAGGCAATTAAAGA PMI0493 545287 - 546078 + | phage protein TERM 692 546111 - 546131 + G 90 -9 -4.93288 | overlap 546120 GAGCAGAACGTACTA GCCGAGTT AAAAA AGCTCGGC TTTTCTTTACCTGTT PMI0494 546075 - 546281 + | hypothetical protein PMI0495 546278 - 546436 + | hypothetical protein TERM 693 546436 - 546448 + F 93 -6.2 -5.63517 | opp_overlap 546436 546434 ACAGAAAACCAAATA GGCC CTAGC GGCC TTTTTTATTTAAGGA PMI0496 546464 - 547072 + | phage protein TERM 694 547569 - 547549 - g 71 -6.8 -4.07526 | AAGTATCCAGAGAAA GCCCGTGA GATTG TCACTGGC GCATTTGAGGCGGTA TERM 695 547899 - 547888 - g 71 -7.2 -3.86202 | GGCGACGATATGAAA CGGG AATA CCCG TCAATACCGTCTGAG PMI0497 547075 - 548562 + | phage terminase large subunit TERM 696 549219 - 549233 + G 71 -7.2 -3.93864 | GCTGGTAACGGTGTG TGGAAT GAA ATTCCA TTTACATTTATTGGT PMI0498 548562 - 549932 + | phage protein TERM 697 549936 - 549979 + G 74 -6.1 -4.48072 | GGTGAGACATGAGAT CAGTGAATGAGCGGTTAAT GGATGA ATTGATTGCTCACTCCCTG TTTTCTGGTCGCTAT PMI0499 549929 - 551050 + | phage protein TERM 698 551070 - 551085 + F 93 -6.8 -5.4833 | opp_overlap 551067 551070 TAAACCATTTAACAA GGTCAC CTCG GTGGCC TTTTTTATTACCTAA TERM 699 551102 - 551118 + F 77 -8.7 -3.61517 | opp_overlap 551102 TTTTTATTACCTAAA CTCAGCT CAG GGCTGAG TTATTACAACGCGCT TERM 700 551118 - 551102 - f 75 -8 -3.68351 | opp_overlap 551102 TTTTTATTACCTAAA CTCAGC TCAGG GCTGAG TTATTACAACGCGCT TERM 701 551635 - 551645 + G 79 -6.8 -4.62069 | AGATTTAATTTTACG TGCC AAA GGCA TTTTTCAGATCAACG PMI0500 551162 - 551923 + | phage protein TERM 702 552158 - 552140 - g 79 -9.6 -3.65351 | GCATCGTGATGTAAA CTCCACAG CAT CTGTAGAG AACAAAAAAATCGGC TERM 703 552181 - 552169 - g 90 -3.3 -5.9218 | TAGAGAACAAAAAAA TCGGC GCG GGCGA ATCTGTTGATGTAAA PMI0501 551937 - 552890 + | phage protein TERM 704 553081 - 553093 + F 70 -6.3 -4.30719 | GAAATTAACTTCTGA TTCAC AGG GTGAA TTTATTGTCACAGCC TERM 705 553181 - 553199 + F 95 -5.9 -5.78622 | opp_overlap 553183, overlap 553183 CCAGACGAGTAATTT AAGGGGC TTTGT GCCCCTC TTTTTTTTGAGGTGA TERM 706 553183 - 553197 + F 88 -8.5 -4.53853 | opp_overlap 553183, overlap 553181 AGACGAGTAATTTAA GGGGC TTTGT GCCCC TCTTTTTTTTGAGGT TERM 707 553197 - 553183 - f 74 -8.5 -3.21962 | opp_overlap 553183 553181 AGACGAGTAATTTAA GGGGC TTTGT GCCCC TCTTTTTTTTGAGGT PMI0503 553217 - 553696 + | phage protein PMI0504 553699 - 554049 + | phage protein PMI0505 554051 - 554632 + | hypothetical protein PMI0506 554629 - 555030 + | phage protein TERM 708 555033 - 555046 + F 87 -5.2 -5.64274 | opp_overlap 555031 555033 TGCAATCCGATAACA CCGC TTAATT GCGG TTTTTTTATACCTAA PMI0507 555076 - 555732 + | phage protein TERM 709 555752 - 555767 + F 82 -7.5 -4.58663 | opp_overlap 555752 555750 555743 TAAATACTCACAACA GCCCC GAGTCA GGGGC TTTTTAAGGACTAAT PMI0508 555784 - 556089 + | phage protein PMI0509 556116 - 556391 + | phage protein PMI0510 556617 - 556850 + | phage protein TERM 710 556996 - 557046 + G 83 -10.6 -3.69083 | opp_overlap 557005, overlap 557005 AAGGCGGTGAGTTTT TAATACAAGGGCTGATGGCATCTG TTG TGGTTGCCATTGGCCTTTATATTA TTATGTATATATTGA TERM 711 557005 - 557037 + G 86 -9.1 -4.38447 | opp_overlap 557005, overlap 556996 AGTTTTTAATACAAG GGCTGATGGCATCTG TTG TGGTTGCCATTGGCC TTTATATTATTATGT PMI0511 556857 - 557666 + | phage protein TERM 712 557680 - 557667 - T 73 -8.1 -3.56268 | opp_overlap 557667, overlap 557663 ACAGATTCAAACTAA CCCAC TCCG GTGGG TTTTTTGTTGCCTGA TERM 713 557667 - 557680 + T 100 -8.1 -5.4833 | opp_overlap 557663 557667 ACAGATTCAAACTAA CCCAC TCCG GTGGG TTTTTTGTTGCCTGA TERM 714 557773 - 557758 - T 70 -6.2 -4.33182 | opp_overlap 557757 557771, overlap 557768 CGACCTACAAAATAA TTGTAG GTAA CTACAA AAGTTTTGTAGTTCA TERM 715 557784 - 557768 - T 70 -8.1 -3.08738 | opp_overlap 557757 557771, overlap 557758 AATAATTGTAGGTAA CTACAAA AGT TTTGTAG TTCAAATATTGAGCG TERM 716 557811 - 557833 + T 74 -7.9 -3.81548 | opp_overlap 557810 AGCGACTCCTAAAGG GTTTTACAA AAAAG TTGTAAAAC TTATCTTGTGTAATT ant 558750 - 557917 - | phage antirepressor protein TERM 717 558569 - 558591 + g 70 -7.7 -3.75461 | opp_overlap 558573 TCACCGCCTTTTGAA GGTATCACG ATTTC CGTGATCCC TTTACTAAACCTTTG PMI0513 558981 - 558820 - | phage protein mnt 559095 - 559352 + | phage regulatory protein EP0005 559453 - 560298 + | phage replication protein TERM 718 560469 - 560457 - g 80 -6.3 -4.77867 | AGATAGAATATAAAA GATAC GTT GTATC CTCAAGAACCCTTAT PMI0516 560285 - 560704 + | hypothetical protein PMI0517 560697 - 561365 + | hypothetical protein TERM 719 561375 - 561388 + F 78 -2.3 -5.72053 | opp_overlap 561375 TCATAATTCTATAAA CATGC TTCG GCAGG TTTTTTGTTTGCTTC TERM 720 561588 - 561554 - g 85 -3 -5.74122 | gap 1, overlap 561556 561559 CAGTAGAGAAAAAAA TATCAGCCCC-ATTT GGATTA AAATGGGGGATGACA TACAGTGATGTGCTC PMI0518 561463 - 562116 + | phage lipoprotein TERM 721 562137 - 562150 + F 100 -8.1 -5.76633 | opp_overlap 562137 562132 TATTCTAAAATACAA CCACC TTCG GGTGG TTTTTTTATATCTGG TERM 722 562150 - 562137 - f 79 -8.1 -3.96506 | opp_overlap 562137, overlap 562132 TATTCTAAAATACAA CCACC TTCG GGTGG TTTTTTTATATCTGG TERM 723 562417 - 562407 - g 70 -5.4 -4.34223 | AATCCAACCAATAAA GCAT TTG ATGC GCTTGATAAAGCCAC TERM 724 562766 - 562752 - g 78 -4.2 -5.20606 | opp_overlap 562752 AAAGAGCAAGAAAAA GCCTTT ATG AATGGC TCAATTACCATTGGT TERM 725 563244 - 563234 - g 73 -6.8 -4.18018 | TGCTGCTATGGAAAA GACC GTT GGTC AATCGGTTGATGAGA TERM 726 563518 - 563501 - g 71 -4.9 -4.59853 | gap 1, overlap 563503 GGAAGGGGTTAAAAA CATG-GCT AGT AGCGCATG GGATGCAATGCTAGA TERM 727 563712 - 563694 - g 79 -3.2 -5.4593 | CTAAAAGAAGAAAAA TTTCAACG TGA CATTAAAA ACGCAAGAGAAAAAG PMI0519 562176 - 565115 + | phage tail tape measure protein PMI0520 565138 - 565350 + | hypothetical protein PMI0521 565390 - 565680 + | phage protein TERM 728 565664 - 565689 + T 72 -9.1 -2.67694 | opp_overlap 565668, overlap 565668 CCATGATAGATCGCA TAAAGGCGG CACAGTAA CCGCCTTTA TAATATGGTACTAAT PMI0522 565900 - 565700 - | phage protein TERM 729 566008 - 566024 + H 100 -7.2 -5.46657 | opp_overlap 565992 CCTGATATTTGATCA GGCGGC TTTGT GTCGCC TTTTTTATTGGAGTA PMI0523 566044 - 566385 + | phage minor tail protein PMI0524 566382 - 567125 + | phage minor tail protein PMI0525 567122 - 567832 + | phage tail assembly protein PMI0526 567829 - 568416 + | phage tail assembly protein TERM 730 568437 - 568449 + F 100 -9.1 -5.64274 | opp_overlap 568435 568437 ACGAATTTCAGAATA GCCAC TAT GTGGC TTTTTTTATGGGTGA TERM 731 568449 - 568437 - f 77 -9.1 -3.25459 | opp_overlap 568437, overlap 568435 ACGAATTTCAGAATA GCCAC TAT GTGGC TTTTTTTATGGGTGA PMI0527 568468 - 572661 + | phage host specificity protein PMI0528 572655 - 573023 + | phage protein PMI0529 573025 - 573639 + | phage protein TERM 732 573643 - 573656 + F 87 -4.5 -5.76633 | opp_overlap 573643 TTAGAAGATTAAATA CCGCA CTAA TGTGG TTTTTTTGTATCTAA PMI0530 573689 - 573949 + | hypothetical protein TERM 733 574120 - 574104 - T 70 -4.3 -4.82901 | overlap 574105 GTGTTTCGACAAAAA TCCACCT TAA AGGCGGG CGCTATTGGTCTTTG TERM 734 574119 - 574105 - T 71 -7.8 -3.49419 | overlap 574104 TGTTTCGACAAAAAT CCACCT TAA AGGCGG GCGCTATTGGTCTTT TERM 735 574521 - 574540 + T 70 -4.4 -4.82901 | gap 1 CGGGGATACGGGGAT TC-GTTTTC GGG GAAAACAGA TTTTTGTGAGCGAAC PMI0532 574963 - 574658 - | fimbrial operon regulator PMI0533 576146 - 575064 - | fimbrial adhesin PMI0534 578690 - 576156 - | fimbrial usher protein TERM 736 577960 - 577948 - G 70 -3.4 -4.84359 | opp_overlap 577948 CCATTCGTATAAAAA TCAC CTAAT GTGA ATTGTGCCCGTAACC PMI0535 579425 - 578700 - | fimbrial chaperone TERM 737 579385 - 579362 - G 83 -11 -3.78934 | GGGTCCCCATAATAA CCACACTGGC TTGA GCCACTGTGG ATACAAACAGAGTCA TERM 738 579465 - 579444 - R 74 -7.2 -3.99678 | overlap 579445 ACCTCTAGAAGGAAA TGGGGCAG TTTTTT CTGCCCCG TAAAATAAAAGCAAT TERM 739 579464 - 579445 - R 83 -10.7 -2.99325 | overlap 579444 CCTCTAGAAGGAAAT GGGGCAG TTTTTT CTGCCCC GTAAAATAAAAGCAA uca 580036 - 579491 - | major fimbrial subunit TERM 740 580252 - 580229 - H 70 -4 -5.0707 | opp_overlap 580229, overlap 580232 AAATATAAAAATAAA TAATTGAAAT TATT ATTTCAAATA TCACTTAAGTAAAGA TERM 741 580249 - 580232 - H 74 -5.7 -4.56117 | opp_overlap 580229, overlap 580229 TATAAAAATAAATAA TTGAAAT TATT ATTTCAA ATATCACTTAAGTAA PMI0537 580267 - 580419 + | hypothetical protein holE1 580670 - 580530 - | DNA polymerase III, theta subunit TERM 742 581943 - 581931 - g 73 -5.5 -4.56914 | overlap 581932 TGATTTAAACGAAAA CGCAC CTC GTGCA ATGGCTGTTATCGAT glnS 580915 - 582582 + | glutaminyl-tRNA synthetase TERM 743 582627 - 582665 + F 100 -12.9 -3.9009 | gap 1, opp_overlap 582622 582635, overlap 582635 582662 582663 ACTAAACTCACATCT TAATAAAATGCTCGATAA TAAT TTATCGAGCATTTT-TTA TTTATCAAATAAGTT TERM 744 582658 - 582635 - f 100 -12.6 -4.66987 | opp_overlap 582627 582635, overlap 582622 CACATCTTAATAAAA TGCTCGATAA TAAT TTATCGAGCA TTTTTTATTTATCAA TERM 745 582635 - 582658 + F 100 -12.6 -5.72622 | opp_overlap 582622 582635, overlap 582627 CACATCTTAATAAAA TGCTCGATAA TAAT TTATCGAGCA TTTTTTATTTATCAA TERM 746 582931 - 582951 + F 77 -4.1 -5.45813 | TATAAAAACGAAACA TTATCATAT TAG GTGTGATAA TTTTCTTTTTTAATA TERM 747 582957 - 582982 + F 71 -7.9 -3.49168 | overlap 582955 GGTGTGATAATTTTC TTTTTTAATAT CAAT ATATTAAAAAA TATTTACGTTCTACT TERM 748 583123 - 583134 + F 73 -4.4 -5.07107 | ATAAGCTGTTGTTAA CCTA ATTT TAGG TTTTTTCCCCATTTG TERM 749 583141 - 583152 + F 86 -7.2 -4.78848 | AATTTTAGGTTTTTT CCCC ATTT GGGG TTTTATATTTGGAAA TERM 750 583164 - 583187 + F 88 -6.8 -5.14965 | GGGGTTTTATATTTG GAAATAGGCG TTGG TGCTTATTTC TTTTTTAGTCAAAGT TERM 751 584179 - 584192 + G 71 -5.3 -4.59109 | opp_overlap 584179 584172 GGGTTAAAGCAGAAG GTAAC CAAG GTTAC TTTTTACAACGTATG PMI0540 583221 - 584615 + | hypothetical protein TERM 752 584657 - 584623 - f 100 -11.7 -4.08557 | opp_overlap 584626 584633, overlap 584626 TTTTCTAAATAACAA TAAGGATAAAGTGTA TTTAT TACGCTTTATCCTTA ATAAAAAATCTAATT TERM 753 584626 - 584654 + F 84 -11.2 -3.15249 | opp_overlap 584626 584623, overlap 584633 TCTAAATAACAATAA GGATAAAGTGTA TTTAT TACGCTTTATCC TTAATAAAAAATCTA TERM 754 584654 - 584626 - f 88 -9 -4.16033 | opp_overlap 584626 584633, overlap 584623 TCTAAATAACAATAA GGATAAAGTGTA TTTAT TACGCTTTATCC TTAATAAAAAATCTA PMI0542 584889 - 585728 + | hypothetical protein TERM 755 585762 - 585745 - T 100 -9.9 -5.5112 | opp_overlap 585745 GTTACCAATAAAAAA GGAACTG CGGG CAGTTCC TTTTTTTACTGAGAT TERM 756 585745 - 585762 + T 100 -9.9 -5.52986 | opp_overlap 585745 GTTACCAATAAAAAA GGAACTG CGGG CAGTTCC TTTTTTTACTGAGAT fur 586238 - 585792 - | ferric uptake regulation protein fldA 586956 - 586429 - | flavodoxin 1 PMI0545 587414 - 587115 - | DNA-binding protein TERM 757 587324 - 587337 + g 74 -5.2 -4.68908 | TTCTAAGCTGTTCAT CCCG AGAAAG CGGG TTTGTTTTAGGTCGC PMI0546 588398 - 587613 - | hydrolase seqA 588863 - 589414 + | negative regulator of replication initiation pgm 589489 - 591132 + | phosphoglucomutase TERM 758 591176 - 591201 + F 100 -12.7 -5.55664 | opp_overlap 591176 TATTACCAAATAGAA TACACTCTACC TATA GGTGGAGTGTA TTTTTTTAATCATAA TERM 759 591201 - 591176 - f 89 -10.5 -3.87323 | opp_overlap 591176 TATTACCAAATAGAA TACACTCTACC TATA GGTGGAGTGTA TTTTTTTAATCATAA TERM 760 591452 - 591464 + G 72 -3.3 -5.09225 | opp_overlap 591452 TTGAGTGTGATGATA TGGCC TTG GGACA TTTTTTAAATGGGCT PMI0549 591289 - 591771 + | hypothetical protein TERM 761 591816 - 591846 + F 100 -7.6 -5.70829 | opp_overlap 591816 591818 CTAGTTACTGAATGA TACCCCAAAATTGA TTT TCTGATTTGGGGTA TTTTTTTATGGTATT PMI0550 591928 - 592170 + | hypothetical protein PMI0551 592163 - 592456 + | hypothetical protein PMI0552 592626 - 592784 + | hypothetical protein TERM 762 592888 - 592902 + F 87 -8.6 -4.21462 | TCTTGAATTTAGGTG GTGTAC ATT GTACAC TTTTAAATGATGGAT PMI0553 592933 - 593265 + | hypothetical protein TERM 763 593307 - 593291 - g 76 -7.3 -4.23892 | overlap 593284 TTCAATGATCTAAAA GCCTCTT TAG AAGAAGC CGTAGAAATTAAAAA PMI0554 593267 - 593551 + | transcriptional regulator PMI0555 593889 - 594095 + | hypothetical protein TERM 764 594110 - 594133 + F 100 -14 -5.11937 | opp_overlap 594113 ACAGAAAATTCCATT TAACGCCTGT TGAA ACAGGCGTTA TTTTTTCCCCTTCTT TERM 765 594130 - 594113 - f 87 -11.3 -3.09681 | opp_overlap 594110 GAAAATTCCATTTAA CGCCTGT TGAA ACAGGCG TTATTTTTTCCCCTT PMI0556 594319 - 595062 + | hypothetical protein TERM 766 595116 - 595086 - T 88 -11.3 -3.32963 | opp_overlap 595086 ATTGCTATTCTATAA GCTATCTCTCTTA TTAAC TAAGTGAGATAGC TTTTTATTTAACAAC TERM 767 595086 - 595116 + T 100 -11.3 -5.27335 | opp_overlap 595086 ATTGCTATTCTATAA GCTATCTCTCTTA TTAAC TAAGTGAGATAGC TTTTTATTTAACAAC PMI0557 597218 - 595143 - | hypothetical protein TERM 768 595322 - 595340 + g 73 -8.2 -3.80174 | TTCTCTCTAATTGCT CTTTTTGC ATT GCAGAAAG TTGTTCTCGCCCTGT TERM 769 596815 - 596828 + g 81 -5.9 -5.1675 | overlap 596807 ATCGCAGTCCGACAG GCGGG TTTA CCTGC TTTTTTGATGAGTAA PMI0558 598348 - 597215 - | hypothetical protein PMI0559 600938 - 598356 - | hypothetical protein TERM 770 598551 - 598563 + g 70 -3.4 -4.90525 | ATTAGCAATATATTG TGCA AGCTC TGCA TTTTGTTTGGGATTA TERM 771 599249 - 599232 - G 70 -8.5 -3.33696 | TGCCGCTTGAATTAA CAAAGTG ACCG CACTTTG GCTTGAACGGCTTTG TERM 772 599650 - 599662 + g 71 -4.8 -4.58773 | opp_overlap 599650 TGTCCTAATAGATAA CCTG AAAAA CAGG TTTTGATTTCGTCCC TERM 773 600089 - 600105 + g 75 -5.9 -4.78237 | TTTCGCCCATTTTTT GCATTTT AGT AAAGTGC TTTTGTTCTGAGCTA TERM 774 600325 - 600308 - G 70 -9.1 -3.12668 | CAGGTTCATAGTCAA GGCGTGC AAGT GCACACC AAATAAAAATGTCAT TERM 775 600986 - 600967 - R 82 -7.9 -4.56597 | opp_overlap 600966 600967 TTTTTGGGTGAAAAA GCAGAGT AAGTTA ACTCTGC CTTTAATAGATAAAT PMI0560 602148 - 601039 - | ATPase TERM 776 601996 - 601963 - G 89 -9.1 -4.68994 | gap 1, opp_overlap 601963 601962, overlap 601945 601964 ATCATCACCGAAAAA CTTAGGTG-TGATACC TAA AGTATCATCACCTAAA ATAAATTGGCGCACA TERM 777 601995 - 601964 - G 77 -10.4 -3.40674 | gap 1, opp_overlap 601963 601962, overlap 601945 601963 TCATCACCGAAAAAC TTAGGTG-TGATACC TAA AGTATCATCACCTAA AATAAATTGGCGCAC PMI0561 605902 - 602174 - | hypothetical protein TERM 778 602924 - 602944 + g 78 -4.1 -5.23016 | overlap 602925 602934 602937 AACTTGTTTAAGTTC TTTTTTACT TGA AGTGAAAAG TTTTTTCGCTTCTTT TERM 779 602934 - 602956 + g 80 -10 -3.75665 | overlap 602925 602924 602937 AGTTCTTTTTTACTT GAAGTGAAAA GTT TTTTCGCTTC TTTAATCAGCTCTGG TERM 780 603423 - 603437 + g 74 -4.2 -5.09521 | opp_overlap 603423 GCCGAACCTAAATAA CGACGT AGT ACCTCG TTTTTAATTTCTTCG TERM 781 603738 - 603751 + g 100 -5.2 -5.79595 | opp_overlap 603725 CACCAACGAATAATC GCGG GATCAA CCGC TTTTTTGTTTTCCCA TERM 782 606284 - 606247 - R 88 -8.7 -4.44974 | opp_overlap 606247 606253, overlap 606253 CGAAATGTTACAAAA TAAAAAGAGCTTCTTAT AAAT ATAACAAGCTCTTTTAA ATATATTATTTTGCT TERM 783 606253 - 606278 + r 80 -7.7 -4.28977 | opp_overlap 606247 606253, overlap 606247 GTTACAAAATAAAAA GAGCTTCTTAT AAAT ATAACAAGCTC TTTTAAATATATTAT TERM 784 606278 - 606253 - R 100 -7.7 -5.54907 | opp_overlap 606253 606247, overlap 606247 GTTACAAAATAAAAA GAGCTTCTTAT AAAT ATAACAAGCTC TTTTAAATATATTAT PMI0562 607420 - 606290 - | MFS-family transporter TERM 785 606838 - 606852 + g 78 -4.2 -5.29445 | TTTTTATCGCTGTTT CCGC TAGTGGT GCGG TTTTTATTGTTGCAG PMI0563 607523 - 608284 + | regulatory protein TERM 786 608321 - 608304 - T 91 -10.5 -4.06384 | overlap 608318 TGCTAATAGCATAAA GCCCCGC AAAA ACGGGGC TTAGCCAGTCAATAA gltA 609637 - 608354 - | citrate synthase GltA sdhC 610272 - 610649 + | succinate dehydrogenase cytochrome b-556 subunit sdhD 610643 - 610987 + | succinate dehydrogenase hydrophobic membrane anchor protein TERM 787 612415 - 612396 - g 70 -7.8 -3.68988 | TTGTATGCAACATAA CTTCTCGG TCTT CCGTGAAG GGGATGCAATGGCGA sdhA 610987 - 612753 + | succinate dehydrogenase flavoprotein subunit sdhB 612788 - 613504 + | succinate dehydrogenase iron-sulfur protein TERM 788 613538 - 613510 - f 100 -16.2 -3.61244 | opp_overlap 613513, overlap 613513 TAGTGCATAAATTAA TAACCGCCCTAA AATAG TTAGGGCGGTTA ATGAAAAAATTAAGT TERM 789 613513 - 613535 + F 100 -13.5 -3.14881 | opp_overlap 613513 613510 TGCATAAATTAATAA CCGCCCTAA AATAG TTAGGGCGG TTAATGAAAAAATTA TERM 790 613535 - 613513 - f 100 -13.5 -3.93401 | opp_overlap 613513, overlap 613510 TGCATAAATTAATAA CCGCCCTAA AATAG TTAGGGCGG TTAATGAAAAAATTA TERM 791 613620 - 613650 + F 100 -12.8 -3.34895 | opp_overlap 613628 613630, overlap 613630 CGGTTTTTGGAGGCA CCTTTAAACACTGT TAG ACAGTTTTTAAAGG TTCCTTGAGAGTGAA TERM 792 613630 - 613640 + F 71 -5.4 -4.62872 | opp_overlap 613628 613630, overlap 613620 AGGCACCTTTAAACA CTGT TAG ACAG TTTTTAAAGGTTCCT TERM 793 614345 - 614329 - g 78 -3.7 -5.28561 | opp_overlap 614329, overlap 614330 AATACAGAAGAAAAA CGTTG GATCCAA CAACG TTTAGAATCTGTCAA TERM 794 614642 - 614614 - g 72 -3.1 -5.09225 | ATTTTAGGGAAAAAA CCGGCAGATTTAT TTG ATGAATTTGCGGG TATACACAAAGAGCA sucA 613789 - 616593 + | 2-oxoglutarate dehydrogenase E1 component TERM 795 617091 - 617069 - g 85 -8.4 -4.44667 | opp_overlap 617073 617089, overlap 617053 617049 617073 GTTGCTAATAATAAA TCAGCAGCAG CGG CCACCGCTGA AGTTTCTCAAGCTCC sucB 616607 - 617815 + | dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex TERM 796 617905 - 617920 + F 78 -9 -3.40403 | opp_overlap 617909 CAGTGTGTTCGTGAA GCCAGA TTTT TCTGGC TTATAGTCAAAAAAA TERM 797 617953 - 617939 - f 86 -7.2 -4.8236 | TAGTCAAAAAAATAA GAAAGT CCG ACTTTC AACAAGATTATGGAT TERM 798 618028 - 618041 + G 70 -8.1 -3.62096 | TCACGGTATGGATTA CCAGC ACCT GCTGG TTTCGCCTGCTCCAC sucC 617977 - 619143 + | succinyl-CoA synthetase beta chain sucD 619143 - 620015 + | succinyl-CoA synthetase alpha chain TERM 799 620054 - 620084 + F 100 -9.8 -5.68489 | opp_overlap 620054 TAAAACTACATATCA TGCCAATCTCTGAT CAA ACTGGAGATTGGCA TTTTTTATTGTTCTA TERM 800 620938 - 620921 - f 78 -2.1 -5.72118 | AAAAAAGATAAAAAA TTAAAAA TTTA TTTTCAA CTTATTAATTAATAG cydA 621499 - 623067 + | cytochrome D ubiquinol oxidase subunit I cydB 623082 - 624239 + | cytochrome D ubiquinol oxidase subunit II PMI0575 624252 - 624365 + | hypothetical protein TERM 801 624360 - 624346 - f 83 -4.3 -5.53288 | CTGAAGCGAAAAAAA CTTCA GAAAG TGAAG AATAATGTTGGATAA TERM 802 624416 - 624394 - g 70 -9.1 -3.14136 | opp_overlap 624394, overlap 624397 TTACCAACTACTTAA CAAGGGCCC AATTA GGGCTCTTG TTTTAATCATGGCTC TERM 803 624394 - 624416 + G 93 -11.3 -4.3129 | opp_overlap 624394 624397 TTACCAACTACTTAA CAAGGGCCC AATTA GGGCTCTTG TTTTAATCATGGCTC PMI0576 624365 - 624649 + | hypothetical protein TERM 804 624696 - 624656 - T 93 -10 -4.4078 | gap 1, opp_overlap 624656 TTCTTCTAATCAAAA TGCCTTATTTTA-ACCTCT AGTA AGTGGCGTAAAATAAGGCA TTCACTTCTTGTATA PMI0577 625633 - 624740 - | LysR-family transcriptional regulator TERM 805 625674 - 625694 + H 75 -8.3 -3.75665 | opp_overlap 625678, overlap 625668 AGTTCTATTTTGTCA GATAGACGA TAT TCGTCAATC TTTCGTACCCTATAG TERM 806 626162 - 626176 + G 73 -7.1 -4.08546 | GCACCTGCAATTTCT CCCAC AATAG GTGGG TTTATCGTTGATGCT PMI0578 625724 - 627094 + | MFS-family transporter PMI0579 627084 - 627491 + | hypothetical protein TERM 807 627509 - 627524 + F 90 -4.7 -5.87996 | opp_overlap 627493 627509, overlap 627502 GATTTTAATAAAAAA CCAGT AATAAG ACTGG TTTTTTTATTGGTTG TERM 808 627524 - 627509 - f 82 -4.7 -5.46657 | opp_overlap 627502 627509, overlap 627493 GATTTTAATAAAAAA CCAGT AATAAG ACTGG TTTTTTTATTGGTTG TERM 809 627679 - 627693 + F 70 -7.2 -3.59372 | overlap 627678 TTATGATTGGCGTCT GAAAAC GGT GTTTTC TATTCTTTACGTTAC TERM 810 628168 - 628150 - g 72 -4.5 -4.7497 | opp_overlap 628154 628160 628161, overlap 628151 TTGATTCATTAAAAA TGAAGCC TGTAG GGCTTCC TAAGTCCATTATCGC PMI0580 627801 - 628196 + | thioesterase TERM 811 628226 - 628244 + G 75 -10.4 -3.21962 | overlap 628222 GTTATCGATCTCTTT CTAAAAGC GGG GCTTTTAG TTAAGTTGATCATGT tolQ 628196 - 628882 + | biopolymer transport protein tolR 628905 - 629330 + | biopolymer transport protein tolA 629358 - 630425 + | TolA protein tolB 630565 - 631863 + | TolB protein pal 631909 - 632406 + | peptidoglycan-associated lipoprotein TERM 812 632473 - 632489 + G 72 -9.4 -3.01712 | overlap 632467 TTACTGGTTGGCGTA GCGGCT CCTGT AGCCGC TATTGCCCAAGCGCC PMI0586 632416 - 633189 + | hypothetical protein PMI0587 634569 - 633679 - | aminoglycoside 6-adenylyltransferase TERM 813 634222 - 634234 + g 70 -3.3 -4.99568 | opp_overlap 634222 GCCTCGTTGATAAAC TGGAC TTA GACCA TTTTGTTTCATATTG pnuC 634809 - 635537 + | nicotinamide mononucleotide transport protein TERM 814 635573 - 635545 - f 100 -6.8 -5.55769 | gap 1, opp_overlap 635545 TCTCATAATAAAAAA GGCTGGTAGAG TTATATTT CTCT-CCAGCC TTGCTATTCGTTGTG aroG 635781 - 636839 + | phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine-repressible TERM 815 636854 - 636889 + T 100 -13.6 -2.90723 | opp_overlap 636857 636863, overlap 636863 ATAGTCTGTTTTTAT TAATAAAAATGCCACT CAAA AGTGGCATTTTTTTTA TCTAATTCAAAGTAA TERM 816 636886 - 636857 - T 84 -10.9 -3.14132 | opp_overlap 636854 636863, overlap 636863 GTCTGTTTTTATTAA TAAAAATGCCACT CAAA AGTGGCATTTTTT TTATCTAATTCAAAG TERM 817 636880 - 636863 - T 100 -9.9 -5.1356 | opp_overlap 636863 636854, overlap 636857 TTTTATTAATAAAAA TGCCACT CAAA AGTGGCA TTTTTTTTATCTAAT TERM 818 636863 - 636880 + T 100 -9.9 -6.0427 | opp_overlap 636857 636863, overlap 636854 TTTTATTAATAAAAA TGCCACT CAAA AGTGGCA TTTTTTTTATCTAAT gpmA 637665 - 636913 - | phosphoglyceromutase TERM 819 637355 - 637365 + g 76 -6.8 -4.43877 | overlap 637364 TCACCGTATTTTTCA GCTG TTT CAGC TTTGTTTAAGCCTTG TERM 820 637596 - 637606 + g 72 -3.2 -5.10665 | CAACGTCAGTCCAGC CTGT AAA ACGG TTTTCTTTGTTCCAT modF 639482 - 638016 - | molybdenum transport ATP-binding protein (photorepair protein) TERM 821 640022 - 640009 - g 71 -3.9 -4.84539 | opp_overlap 640009 640017 GAAGGAAAGATAAAA TCAAT CTTT ATTGA TAATATGACTTCCCC PMI0592 639658 - 641217 + | adhesin secretion/activation protein (two-partner secretion system accessory protein) TERM 822 643718 - 643708 - g 70 -3.2 -4.84642 | overlap 643703 643700 TCCAAATTAATAAAA GAAG CCG CTCC TTTTTTCAGTGATAT TERM 823 646197 - 646177 - g 87 -4.8 -5.52023 | ACTACCAACAAAAAA GCTATTGA AATAA TCAATAAC GGGGAGTTTATAATA TERM 824 646504 - 646488 - g 73 -2.3 -5.25699 | opp_overlap 646491, overlap 646490 646491 ATCATATAATAAAAA CACCAAT AGT ATTGATA TTTTGTATGAAAGAG PMI0593 641233 - 646641 + | adhesin PMI0594 646641 - 646952 + | hypothetical protein TERM 825 647127 - 647086 - T 90 -9.1 -4.63527 | gap 1, opp_overlap 647086 647084 647081 GTATTAGTCGAAAAA CCATCACTTAATATAATTTT TAA AATATCA-ATTAAGTGATGG TGTTATTTTTACTGA modR 647953 - 647162 - | molybdenum transport regulatory protein PMI0596 648112 - 648255 + | hypothetical protein TERM 826 648296 - 648274 - f 83 -10.6 -3.35679 | opp_overlap 648274 CCCCTCTATTTAGAA CAGCCCTTTA TTG TGAAGGGCTG TTTTTTAATACTCCT TERM 827 648274 - 648296 + F 100 -12.8 -5.19212 | opp_overlap 648274 CCCCTCTATTTAGAA CAGCCCTTTA TTG TGAAGGGCTG TTTTTTAATACTCCT modA 649074 - 649844 + | molybdate ABC transporter, substrate-binding protein modB 649862 - 650554 + | molybdenum ABC transporter, permease protein modC 650548 - 651612 + | molybdenum ABC transporter, ATP-binding protein TERM 828 651631 - 651657 + T 100 -12.4 -3.96216 | opp_overlap 651635, overlap 651635 ATTGATTTATAAAAA TAAAGCCTCGTC ATA GATGAGGCTTTG TTGTTTGAATAGCAA TERM 829 651635 - 651653 + T 100 -11 -4.58585 | opp_overlap 651635, overlap 651631 ATTTATAAAAATAAA GCCTCGTC ATA GATGAGGC TTTGTTGTTTGAATA TERM 830 651653 - 651635 - T 95 -8.8 -4.97405 | opp_overlap 651631 651635 ATTTATAAAAATAAA GCCTCGTC ATA GATGAGGC TTTGTTGTTTGAATA PMI0600 652498 - 651677 - | hydrolase TERM 831 653519 - 653530 + G 72 -4.4 -4.70534 | TCTCATTTCTTGCGG TCAG AAAT CTGA TTTTGTCTCTGTTTC pgl 652647 - 653636 + | 6-phosphogluconolactonase TERM 832 653648 - 653676 + T 100 -14 -3.01924 | ATAAGTATTGCTTGC TCTCTAGCGGTA GATGA TGCCGCTAGAGA TATTAAAACAAAATA bioA 654970 - 653693 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 833 655345 - 655357 + G 70 -3.3 -4.96848 | opp_overlap 655344 655345 AAAAAGCAAAAGCAG CTGGT TCA ACCCG TTTTTGTATGGGCGC TERM 834 655910 - 655923 + G 76 -2.3 -5.37345 | ATTCTGTTTTATGGC TGGCG CAAA CTCCA TTTTTTATGGTTGCA bioB 655074 - 656111 + | biotin synthase TERM 835 656172 - 656160 - gf 78 -9.1 -3.54 | opp_overlap 656146, overlap 656149 656146 656137 656158 ATGAGCGTAGAAATA CGCCA TTA TGGCG AAAAAGACAGGTGAT bioF 656111 - 657274 + | 8-amino-7-oxononanoate synthase bioC 657249 - 658016 + | biotin synthesis protein BioC bioD 658009 - 658695 + | dethiobiotin synthetase TERM 836 658834 - 658858 + F 71 -8.7 -2.80761 | overlap 658833 TAAGCACTTTGTTCA GTTATCCAC TATTCCT GTGGATAAC CTTGTGTATTACCAT uvrB 659167 - 661176 + | excinuclease ABC subunit B TERM 837 661207 - 661231 + F 100 -12.3 -5.74288 | opp_overlap 661218 AGATTAGCTTACAGG GGGCGTTATAA CGT TTATAACGCTC TTTTTTGTTATTTCT PMI0608 661372 - 662325 + | hypothetical protein TERM 838 662391 - 662422 + T 91 -7.4 -5.31059 | opp_overlap 662391 ATAAAGACTAATTAA CCGCACTGAGAT AGATAATG ATTTTAGTGCGG TTTTTTGATTGGTAT PMI0609 663378 - 662443 - | hypothetical protein TERM 839 663670 - 663656 - H 79 -8.6 -3.80174 | ATATTGGTATAAGAA CCTGTT AAA AACAGG TAAAGATTAACTCCT TERM 840 664010 - 663998 - g 79 -3.3 -5.38047 | overlap 663999 TAGGCACAGAAAAAA TCCGT TTA ACGGG TGGTGAGCCTACGAT TERM 841 664236 - 664219 - g 82 -8.5 -4.19177 | ACCGGGCAAGATAAA TTCCATC AAGT GATGGAA GGAATAGACGCTGCT moaA 663808 - 664788 + | molybdenum cofactor biosynthesis protein A moaC 664830 - 665309 + | molybdenum cofactor biosynthesis protein C moaD 665306 - 665551 + | molybdenum cofactor biosynthesis protein D moaE 665553 - 666014 + | molybdenum cofactor biosynthesis protein E TERM 842 666130 - 666146 + F 77 -8.7 -3.74693 | opp_overlap 666130 666122 AAATTAATCACTAAT GAGTCCA TAA TGGGCTC TTTACTGAAATAAAC TERM 843 666326 - 666354 + G 73 -8.1 -3.92178 | TTACTTACTGCATTT GTTGCTCTGTATG TTG CATCCAGCGCGAC TTTAATTGAGATGAT TERM 844 666367 - 666385 + G 79 -3.2 -5.41941 | GACTTTAATTGAGAT GATCTT CACTAAT AAGATC TTTTTCTTTGGTTTG PMI0614 666209 - 666919 + | hypothetical protein TERM 845 666956 - 666980 + T 100 -8.7 -5.59879 | opp_overlap 666956 AACCGCATAGTTAAA TCCCATAAC CTCTTCA GTTATGGGA TTTTTTGTATTTATA TERM 846 666980 - 666956 - T 82 -9.4 -3.71645 | opp_overlap 666956 AACCGCATAGTTAAA TCCCATAACC TCTTC AGTTATGGGA TTTTTTGTATTTATA PMI0615 668171 - 667062 - | ABC transporter, permease protein TERM 847 667141 - 667164 + g 77 -6.2 -4.63184 | gap 1, opp_overlap 667141 AGTGCCCATAAACTA TGCC-ATATTA CGG TAATATCGGCA TTTTTGAGGTAGATT PMI0616 669338 - 668187 - | ABC transporter, permease protein PMI0617 671100 - 669331 - | ABC transporter, ATP-binding protein PMI0618 672107 - 671121 - | HlyD-family secretion protein TERM 848 671317 - 671278 - G 74 -4.4 -4.86731 | gap 1, opp_overlap 671286 671291 GTTGGCGAAACAAAA CCTATAGT-GCCATGATAA GGC TTATCTTTGCGACTATCGG TATAAAGATACACCT TERM 849 671428 - 671417 - G 79 -5.8 -4.97461 | AAGAAACAGTAAAAA CAGG GCTT CCTG CTGATAAAATAGTGC PMI0619 672823 - 672125 - | TetR-family transcriptional regulator rhlE 673134 - 674531 + | ATP-dependent RNA helicase TERM 850 674567 - 674583 + G 75 -9.4 -3.30771 | opp_overlap 674567 ATTAGCGCCAATGGA GGGGGT GTTAG ACCCCC TTGTGAGAGATCTAC TERM 851 674583 - 674567 - g 70 -9.4 -2.53382 | opp_overlap 674567 ATTAGCGCCAATGGA GGGGGT GTTAG ACCCCC TTGTGAGAGATCTAC TERM 852 674739 - 674710 - g 80 -10.1 -3.75193 | gap 1, overlap 674711 AATTACACACCCAAA GCCGCACGCAAAGT GGC ACTTTG-GTGCGGG TACAATTATTAGGGC TERM 853 674738 - 674711 - g 91 -13.6 -2.84393 | gap 1, overlap 674710 ATTACACACCCAAAG CCGCACGCAAAGT GGC ACTTTG-GTGCGG GTACAATTATTAGGG dusC 674541 - 675473 + | tRNA-dihydrouridine synthase C TERM 854 675503 - 675526 + F 72 -2.4 -5.36441 | TATTAATAGCCAAAA CCAGCATT AATAATAA GGTGCTGG TTTTTTCTATAAAAA PMI0622 675679 - 675927 + | transglycosylase associated protein TERM 855 675978 - 675955 - T 74 -9.6 -2.77701 | opp_overlap 675955 675956, overlap 675960 AGTCTATTAATACTA TTAAACCCGC ATCT GCGGGTTTAC TTTTTTGTGCTAACT TERM 856 675955 - 675978 + T 100 -9.6 -5.31877 | opp_overlap 675955 675960, overlap 675956 AGTCTATTAATACTA TTAAACCCGC ATCT GCGGGTTTAC TTTTTTGTGCTAACT TERM 857 675956 - 675977 + T 100 -13.1 -3.78042 | opp_overlap 675955 675960, overlap 675955 GTCTATTAATACTAT TAAACCCGC ATCT GCGGGTTTA CTTTTTTGTGCTAAC TERM 858 675973 - 675960 - T 83 -9.5 -3.8505 | opp_overlap 675956 675955, overlap 675955 ATTAATACTATTAAA CCCGC ATCT GCGGG TTTACTTTTTTGTGC TERM 859 676016 - 676035 + T 72 -5.8 -4.46212 | gap 1 CGCTTTTATTTTATT CGCATTCAC AAG GT-AATGCG TTTTCTGCTCCCCAC sseA 676856 - 676011 - | 3-mercaptopyruvate sulfurtransferase PMI0624 677054 - 676869 - | hypothetical protein TERM 860 677013 - 676997 - G 76 -4.3 -5.06414 | overlap 676998 GTCCGGCAAGAAAAA CGCCTCC AAG GGAGCCA AAAGCCAGTAGTGCG TERM 861 677290 - 677257 - R 100 -10.4 -5.34365 | overlap 677258 GGATAATAACAAAAA GCCCTTAAACTCAG GAGTCA CCGAGTTTAAGGGG AAGGGAATACAACTT TERM 862 677289 - 677258 - R 100 -13.9 -3.78992 | overlap 677257 GATAATAACAAAAAG CCCTTAAACTCAG GAGTCA CCGAGTTTAAGGG GAAGGGAATACAACT dcuD 678707 - 677340 - | C4-dicarboxylate transporter metC 679918 - 678743 - | cystathionine beta-lyase TERM 863 680274 - 680293 + H 85 -5.1 -5.70522 | opp_overlap 680262 680274, overlap 680285 TAACAAGCTAACAAC TCGTTTT ATTTTA AAAACGA TTTTTTATTATTCTT TERM 864 680468 - 680456 - g 70 -7.7 -3.72742 | opp_overlap 680456 680455 GCATTAGCAATAGAA CAAGC TGA GCTTG GTTTAATTCCTCAAA TERM 865 680888 - 680876 - g 70 -7.7 -3.72241 | opp_overlap 680875 680876 TATCAACGACTTAAA GAGGT GGA ACCTC GTCTATTTGTTGGCA PMI0627 680327 - 681694 + | lyase TERM 866 681735 - 681720 - f 93 -9 -4.89393 | opp_overlap 681720 GAAATCTCATAAAAA GCCAGT GATA ACTGGC TTTGTTATTATCAGC TERM 867 681720 - 681735 + F 89 -9 -4.51812 | opp_overlap 681720 GAAATCTCATAAAAA GCCAGT GATA ACTGGC TTTGTTATTATCAGC PMI0628 681765 - 683144 + | MmgE/Prp family protein TERM 868 683219 - 683245 + T 100 -8.9 -5.38326 | gap 1, opp_overlap 683219 GTTGCACCTGATAAA TGGCACTGACAA TTTA TTGT-AGTGCCA TTTTTGTTTCCTTAA TERM 869 683245 - 683219 - T 81 -8.9 -3.89346 | gap 1, opp_overlap 683219 GTTGCACCTGATAAA TGGCACTGACAA TTTA TTGT-AGTGCCA TTTTTGTTTCCTTAA PMI0629 684173 - 683265 - | LysR-family transcriptional regulator dinG 684437 - 686545 + | ATP-dependent helicase TERM 870 686571 - 686552 - T 100 -9.3 -5.35721 | opp_overlap 686551 686552 ACAGAATAATAAAAA GGCTACC TATATT GGTAGCC CTTTTCAGTAAGAAG TERM 871 686552 - 686571 + T 74 -9.3 -3.10597 | opp_overlap 686552, overlap 686551 ACAGAATAATAAAAA GGCTACC TATATT GGTAGCC CTTTTCAGTAAGAAG dps 687112 - 686606 - | DNA protection during starvation protein TERM 872 687314 - 687355 + r 91 -8.3 -5.12172 | opp_overlap 687306 687309 687317 687321 687327, overlap 687317 687321 AGTAAAGTTATTATT TAATAAGTAAAAAGAGATC AACT GATCTCTTTTCATTTAATA TTTTATTTATTAATA TERM 873 687352 - 687317 - R 81 -10 -3.10908 | opp_overlap 687314 687317 687321, overlap 687306 687309 687321 687327 AAAGTTATTATTTAA TAAGTAAAAAGAGATC AACT GATCTCTTTTCATTTA ATATTTTATTTATTA TERM 874 687317 - 687352 + r 81 -10 -3.08374 | opp_overlap 687306 687309 687317 687321 687327, overlap 687314 687321 AAAGTTATTATTTAA TAAGTAAAAAGAGATC AACT GATCTCTTTTCATTTA ATATTTTATTTATTA TERM 875 687348 - 687321 - R 83 -10.8 -2.81316 | opp_overlap 687317 687314 687321, overlap 687317 687327 TTATTATTTAATAAG TAAAAAGAGATC AACT GATCTCTTTTCA TTTAATATTTTATTT TERM 876 687321 - 687348 + r 82 -8.6 -4.14724 | opp_overlap 687321 687317 687327, overlap 687317 687314 TTATTATTTAATAAG TAAAAAGAGATC AACT GATCTCTTTTCA TTTAATATTTTATTT TERM 877 687342 - 687327 - R 89 -7.6 -4.99435 | opp_overlap 687321 687317 687314, overlap 687321 687317 TTTAATAAGTAAAAA GAGATC AACT GATCTC TTTTCATTTAATATT PMI0632 688280 - 687390 - | hypothetical protein TERM 878 688071 - 688053 - G 83 -6 -5.06585 | TAAACCATATAAAAA TAGTGGCA TTA TGGCACTA CGAGAAAAGCTTAGA PMI0633 688629 - 689207 + | lysine decarboxylase PMI0634 689217 - 689681 + | acetyltransferase TERM 879 689705 - 689727 + T 95 -12.1 -3.58176 | opp_overlap 689705 689709, overlap 689709 TAATCATGGCAAAAA TAAACCCGC TGAGT GCGGGTTTA TTAATTATGTTATTC TERM 880 689727 - 689705 - T 100 -12.1 -4.64598 | opp_overlap 689705 689709, overlap 689709 TAATCATGGCAAAAA TAAACCCGC TGAGT GCGGGTTTA TTAATTATGTTATTC TERM 881 689709 - 689723 + T 88 -8.5 -4.39107 | opp_overlap 689705 689709, overlap 689705 CATGGCAAAAATAAA CCCGC TGAGT GCGGG TTTATTAATTATGTT TERM 882 689723 - 689709 - T 93 -8.5 -4.87389 | opp_overlap 689709 689705, overlap 689705 CATGGCAAAAATAAA CCCGC TGAGT GCGGG TTTATTAATTATGTT TERM 883 689750 - 689767 + T 71 -7.7 -3.4072 | opp_overlap 689750 TGTTATTCAGCTAAA TTGTGGG TTTC CCCGCAA TTATCGTACACAATA PMI0635 691505 - 689745 - | amidohydrolase moeB 692469 - 691702 - | molybdopterin biosynthesis protein TERM 884 692388 - 692369 - G 79 -10.8 -3.21064 | opp_overlap 692372, overlap 692367 692372 CCGACAATCAATACA GAAGCACT TTTC AGTGCTTC TTGACCGTCAAAATC moeA 693716 - 692475 - | molybdopterin biosynthesis protein TERM 885 692825 - 692809 - G 71 -9.5 -2.87211 | ACTGTTGCTGAGACA GGATTAC CCG GTAATCC GCAGAACCAAGCATT PMI0638 693932 - 695101 + | MFS-family transporter folE 695247 - 695909 + | GTP cyclohydrolase TERM 886 696983 - 697003 + G 72 -4.7 -4.82901 | overlap 696985 696986 GATAAATATTATCTT TGCCGTAAC GTG GTTACGCTA TTTTTCTCAAGGGCC PMI0640 695919 - 697070 + | hypothetical protein TERM 887 697075 - 697098 + T 72 -9 -2.65894 | overlap 697074 AACGCTTTTAACTGT TTTTGCCATT GTTT AATGGCAAAG CTTCTACCTCTTGTG sanA 697792 - 697067 - | transport protein TERM 888 697868 - 697893 + r 100 -12.7 -4.11216 | opp_overlap 697868 GGAAGCAAGAAAAAA GCGCGCTATTA GTGA TAATAGTGCGC TTTTCAGAATGAAAC TERM 889 697893 - 697868 - R 100 -10.5 -5.5604 | opp_overlap 697868 GGAAGCAAGAAAAAA GCGCGCTATTA GTGA TAATAGTGCGC TTTTCAGAATGAAAC sfcA 699624 - 697927 - | NAD-dependent malic enzyme TERM 890 699771 - 699798 + r 91 -7.1 -5.24129 | opp_overlap 699771, overlap 699759 699759 GACTTTTTCTGATAA GCATCAGCA AAAATTTACA TGCTGATGC TTTTTTATGAGGACA cdd 700723 - 699839 - | cytidine deaminase TERM 891 700880 - 700920 + r 100 -12.1 -3.80094 | opp_overlap 700891, overlap 700891 ATTGATTTTAGCATT AGCATAAAAAACCTTCGCT CTG AACGAAGGTTTTTTATGTG TTCTATTGATTTAGC TERM 892 700891 - 700909 + r 100 -7.4 -5.48787 | opp_overlap 700891, overlap 700880 CATTAGCATAAAAAA CCTTCGCT CTG AACGAAGG TTTTTTATGTGTTCT TERM 893 700909 - 700891 - R 100 -9.6 -5.32882 | opp_overlap 700891 700880 CATTAGCATAAAAAA CCTTCGCT CTG AACGAAGG TTTTTTATGTGTTCT PMI0644 701648 - 700947 - | hypothetical protein PMI0645 702109 - 701642 - | hypothetical protein TERM 894 702214 - 702187 - R 100 -12 -5.89921 | opp_overlap 702187 702189, overlap 702189 ATCACAATAAAAAAA GAGCGGGGCTCT TTAT AGAACCCCGCTT TGTATTTGCATTTTG TERM 895 702189 - 702212 + r 100 -12.4 -4.37554 | opp_overlap 702187 702189, overlap 702187 CACAATAAAAAAAGA GCGGGGCTCT TTAT AGAACCCCGC TTTGTATTTGCATTT TERM 896 702212 - 702189 - R 100 -14.6 -4.57921 | opp_overlap 702187 702189, overlap 702187 CACAATAAAAAAAGA GCGGGGCTCT TTAT AGAACCCCGC TTTGTATTTGCATTT metG 704272 - 702245 - | methionyl-tRNA synthetase TERM 897 702361 - 702351 - G 73 -6.8 -4.24002 | TCTGAAATTCCAAAA CGCA TTT TGCG AGGTGCTAGGTTTGC TERM 898 703092 - 703080 - G 76 -6.9 -4.42386 | CGTTTACTGATAAAA CCCGC AGT ACGGG ACGCGAGGTTAACCA TERM 899 703860 - 703873 + g 74 -3.8 -5.15167 | TTAACAAAACGATCA GGCA AGAACA TGCC TTTTTCTTCATCATA TERM 900 703948 - 703964 + g 83 -7.3 -4.70772 | opp_overlap 703959 GGGCTAGATAAATTT TCGTCGA TAA TTGACGA TTTTCTTCACTGTGT TERM 901 704701 - 704691 - g 76 -2.4 -5.4833 | TGATTGAAGAAAAAA CGGC AGA GCTG CGTAATATGACGGGA PMI0648 704477 - 705589 + | ATP-binding protein TERM 902 705621 - 705639 + F 100 -9.6 -5.94713 | CTATTGATTATTATG GGAAGTCT TTT AGGCTTCC TTTTTTTTATCCGCT udk 705802 - 706443 + | Uridine kinase dcd 706520 - 707101 + | deoxycytidine triphosphate deaminase asmA 707146 - 709077 + | outer membrane assembly protein TERM 903 709094 - 709123 + F 100 -16.7 -5.2853 | opp_overlap 709097 TTTTAAAGTTGTTAA CAAGGTGGAATAA CTTT TTATTCCACCTTG TTTTGTTTTTGGCTA TERM 904 709120 - 709097 - f 95 -12.6 -3.64283 | opp_overlap 709094 TAAAGTTGTTAACAA GGTGGAATAA CTTT TTATTCCACC TTGTTTTGTTTTTGG TERM 905 709214 - 709190 - f 74 -7.9 -3.83026 | opp_overlap 709192, overlap 709193 709195 TTCTCTTATATTAAA CAATATCTGTG GAA CACAGATGCTG CATTACGTTTCTTAT TERM 906 709209 - 709195 - f 77 -8.6 -3.61438 | opp_overlap 709192, overlap 709193 709190 TTATATTAAACAATA TCTGTG GAA CACAGA TGCTGCATTACGTTT dcuC 709506 - 710867 + | anaerobic C4-dicarboxylate transporter TERM 907 710927 - 710955 + T 100 -11.2 -5.4505 | gap 1 TTTTCATTCTATTGA CGGGCTTTGT-TA TGTA TAGACAAAGCCCG TTTTTTATTAAGCAC TERM 908 710988 - 711008 + T 83 -8.3 -4.16371 | opp_overlap 710988 TTTTCAGATAAAAAA TATCCGCCT TAG AGACGGATA TTTGGTTATTTAATA TERM 909 711008 - 710988 - T 100 -10.5 -5.36441 | opp_overlap 710988 TTTTCAGATAAAAAA TATCCGCCT TAG AGACGGATA TTTGGTTATTTAATA PMI0653 712608 - 711028 - | probable transporter TERM 910 712769 - 712728 - H 70 -7.1 -3.65902 | opp_overlap 712728, overlap 712739 TTCATTTTATCCAAA GCACCGTAAAACCCCGTCC TTCA GGTCGAGGATATAAGGCGC GGTTTTTTAACTAAC TERM 911 712758 - 712739 - H 74 -7 -4.18094 | opp_overlap 712728, overlap 712728 CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGAGG ATATAAGGCGCGGTT gnd 713406 - 714812 + | 6-phosphogluconate dehydrogenase, decarboxylating TERM 912 714844 - 714862 + T 100 -13.2 -4.96106 | GTTATAAGTGTTAGG GGTGCTGA ATT TCAGCACC TTTTTACTATTTGTA PMI0656 715432 - 714932 - | hypothetical protein TERM 913 715353 - 715341 - G 72 -9.1 -3.30159 | opp_overlap 715344, overlap 715344 GCAACTTCCTCAGAA CGACC CGC GGTCG GGTGTTCCATGACGC TERM 914 715526 - 715543 + H 72 -5.7 -4.43307 | overlap 715523 TTTGGTATTTATTAT TTTGATA AGCC TATCAAA TTATTTTGTTACAAA TERM 915 715578 - 715602 + H 78 -9.5 -3.28309 | opp_overlap 715575 715578 715597 715598 715600, overlap 715592 715598 AATATGTTAATAGTA TTATCCTATTG AAT TAATAGGATAA TTAGATTATCTATAT TERM 916 716540 - 716554 + G 70 -3.5 -4.91712 | overlap 716541 TGTGCATGCTATGGC TCACC AATTA GGTGG TTTTTATAACTTACC PMI0657 715743 - 716894 + | probable alcohol dehydrogenase TERM 917 716981 - 716951 - T 77 -8.5 -3.65446 | gap 1, opp_overlap 716951, overlap 716947 TAAGCAAAGAATTAA CACCTCAAATATCA ATGT CG-TATTTGAGGTG TTTTTTATATTATCA TERM 918 716951 - 716981 + T 100 -10.6 -5.5208 | opp_overlap 716951 716947 TAAGCAAAGAATTAA CACCTCAAATATCA ATG TCGTATTTGAGGTG TTTTTTATATTATCA hisI 717654 - 717037 - | histidine biosynthesis bifunctional protein [includes: phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase] hisF 718427 - 717654 - | imidazole glycerol phosphate synthase subunit HisF hisA 719146 - 718409 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino] imidazole-4-carboxamide isomerase hisH 719743 - 719153 - | imidazole glycerol phosphate synthase subunit hisB 720810 - 719743 - | histidine biosynthesis bifunctional protein [includes: histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase] TERM 919 720186 - 720172 - G 90 -11.4 -3.85539 | opp_overlap 720171 720170 GATATTCATACGAAA GCCACC GTG GGTGGC AATTTGATCTAGCAT hisC 721940 - 720858 - | histidinol-phosphate aminotransferase TERM 920 721393 - 721403 + g 76 -6.8 -4.48449 | opp_overlap 721393 TAAGCTTCGTCAATA GCCA CAA TGGC TTTATCTTTTGCTAA hisD 723259 - 721943 - | histidinol dehydrogenase TERM 921 722686 - 722670 - G 82 -8.7 -4.2558 | GACTCTGTACCAAAA GCCATCG CAG CAATGGC TTGAGCACCACCGAC TERM 922 722886 - 722866 - G 71 -6.1 -4.1891 | CTCCGGGAATATAAA GTCCTACTG CAT CAATAGGGC GACTGACTTGTTGGC hisG 724165 - 723266 - | ATP phosphoribosyltransferase PMI0666 724305 - 724159 - | hypothetical protein TERM 923 724241 - 724220 - G 100 -15.9 -5.64274 | opp_overlap 724220 TTAGCTATAAAAAAA CCCCGGAAG TTGC CTTCCGGGG TTTTTATTTTATTGT TERM 924 724220 - 724241 + g 100 -15.9 -5.64321 | opp_overlap 724220 TTAGCTATAAAAAAA CCCCGGAAG TTGC CTTCCGGGG TTTTTATTTTATTGT PMI0667 724671 - 725492 + | hypothetical protein PMI0668 726109 - 725489 - | glutathione S-transferase TERM 925 726034 - 726046 + g 75 -7.7 -4.07568 | CAATTTGTTCGTAAG GAGCT TGA AGCTC TTTTAAACACCACAG TERM 926 726589 - 726599 + G 73 -5.4 -4.56597 | CTGTTTTAAAGGGCT CATC CTT GATG TTTTTAAAACCAGGC dacC 726267 - 727469 + | penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) TERM 927 727511 - 727534 + T 100 -14 -4.21631 | opp_overlap 727511 727514, overlap 727514 ACCCATTTAAAATAA GAATGCCAGT ATTA ACTGGCATTC TTTATTGAGTAGGTT TERM 928 727534 - 727511 - T 100 -14 -4.22214 | opp_overlap 727511 727514, overlap 727514 ACCCATTTAAAATAA GAATGCCAGT ATTA ACTGGCATTC TTTATTGAGTAGGTT TERM 929 727531 - 727514 - T 93 -9.9 -4.22475 | opp_overlap 727511 727514, overlap 727511 CATTTAAAATAAGAA TGCCAGT ATTA ACTGGCA TTCTTTATTGAGTAG TERM 930 727514 - 727531 + T 93 -9.9 -4.22554 | opp_overlap 727514 727511, overlap 727511 CATTTAAAATAAGAA TGCCAGT ATTA ACTGGCA TTCTTTATTGAGTAG fhs 729229 - 727559 - | formate--tetrahydrofolate ligase TERM 931 729001 - 729015 + g 77 -7.8 -4.2803 | GGGCTTGTCCTAATC CTACCG TAA CGGTGG TTTTACCTTCACCTG TERM 932 729519 - 729544 + r 77 -8.3 -3.92075 | opp_overlap 729520 729523, overlap 729520 729523 GGGGAGCAAAAATAA ATAATGCCAGC AAAA GCTGGCATTGG TTTATGGGTAACAAT TERM 933 729520 - 729543 + r 88 -11.8 -2.94924 | opp_overlap 729520 729523, overlap 729519 729523 GGGAGCAAAAATAAA TAATGCCAGC AAAA GCTGGCATTG GTTTATGGGTAACAA TERM 934 729543 - 729520 - R 100 -9.6 -4.91852 | opp_overlap 729520 729519 729523, overlap 729523 GGGAGCAAAAATAAA TAATGCCAGC AAAA GCTGGCATTG GTTTATGGGTAACAA TERM 935 729523 - 729540 + r 93 -11.3 -3.61988 | opp_overlap 729520 729523, overlap 729520 729519 AGCAAAAATAAATAA TGCCAGC AAAA GCTGGCA TTGGTTTATGGGTAA TERM 936 729540 - 729523 - R 100 -11.3 -4.53857 | opp_overlap 729523 729520 729519, overlap 729520 AGCAAAAATAAATAA TGCCAGC AAAA GCTGGCA TTGGTTTATGGGTAA sdaB 730941 - 729577 - | L-serine dehydratase sdaC 732384 - 731056 - | serine transporter TERM 937 733273 - 733253 - R 93 -6.1 -5.66338 | opp_overlap 733253 AAAGACAATAAAAAA GACCACATT AAT ACTGTGGCC TTTTGCGGTTGTTTC PMI0673 733914 - 733303 - | membrane-associated phosphatase PMI0674 734152 - 734577 + | hypothetical protein TERM 938 734840 - 734794 - T 82 -7.6 -4.64763 | opp_overlap 734800, overlap 734800 GTAGGTAAAAAAGAA TGAAAACGCTAAAACACATT GATAAAT AAAGTATTTTAGCGTTTTAA AAATTAGTTATAGAT TERM 939 734834 - 734800 - T 79 -6.6 -4.72772 | opp_overlap 734800, overlap 734794 AAAAAAGAATGAAAA CGCTAAAACACATT GATAAAT AAAGTATTTTAGCG TTTTAAAAATTAGTT grxA 735107 - 734844 - | glutaredoxin PMI0676 735278 - 735580 + | hypothetical protein TERM 940 735598 - 735642 + F 71 -5.2 -4.56969 | gap 2, opp_overlap 735609, overlap 735609 ACAGTTTTATATCAT GATGAGTGA-AA-GAGGCTAGG TGA CTTAGCCTCTTTGTCACTTGAC TTTATTTGTGGCGTT TERM 941 735629 - 735609 - f 82 -9.7 -3.69323 | opp_overlap 735598 735609 TCATGATGAGTGAAA GAGGCTAGG TGA CTTAGCCTC TTTGTCACTTGACTT TERM 942 735609 - 735629 + F 100 -11.9 -3.98484 | opp_overlap 735609, overlap 735598 TCATGATGAGTGAAA GAGGCTAGG TGA CTTAGCCTC TTTGTCACTTGACTT PMI0677 735751 - 736254 + | hypothetical protein TERM 943 736314 - 736331 + G 85 -9.1 -4.30231 | CCAGTGCGGGTGATT GCCACTC TTGT GGGTGGC TTTCTCTTGCTTATT TERM 944 736554 - 736571 + G 75 -5.5 -4.66953 | overlap 736570 AATGCCCACTCTATC CCGCTTC TTTT GAACCGG TTTTTCCAATATTAA TERM 945 736741 - 736724 - g 100 -4.8 -5.93809 | overlap 736725 CGCTCAGAAAAAAAA CTGGCG CAACTT CGCCAA GCATTACCATGGTTA TERM 946 736740 - 736725 - g 71 -6.1 -4.15201 | overlap 736724 GCTCAGAAAAAAAAC TGGCG CAACTT CGCCA AGCATTACCATGGTT rumB 736283 - 737416 + | 23S rRNA (uracil-5-)-methyltransferase TERM 947 737483 - 737519 + T 79 -8 -4.07568 | opp_overlap 737484 737487, overlap 737484 737487 TAACTGCACAACTTA ATAACCCCCAAAGCGG TTGTT CAACTTTGGGGGTTAA TTTTAAAGCAAAAAA TERM 948 737484 - 737518 + T 87 -11.5 -3.04398 | opp_overlap 737484 737487, overlap 737483 737487 AACTGCACAACTTAA TAACCCCCAAAGCGG TTGTT CAACTTTGGGGGTTA ATTTTAAAGCAAAAA TERM 949 737518 - 737484 - T 100 -13.7 -3.24017 | opp_overlap 737484 737483 737487, overlap 737487 AACTGCACAACTTAA TAACCCCCAAAGCGG TTGTT CAACTTTGGGGGTTA ATTTTAAAGCAAAAA TERM 950 737487 - 737515 + T 77 -8.8 -3.66908 | opp_overlap 737484 737487, overlap 737484 737483 TGCACAACTTAATAA CCCCCAAAGCGG TTGTT CAACTTTGGGGG TTAATTTTAAAGCAA TERM 951 737515 - 737487 - T 89 -11 -3.75766 | opp_overlap 737487 737484 737483, overlap 737484 TGCACAACTTAATAA CCCCCAAAGCGG TTGTT CAACTTTGGGGG TTAATTTTAAAGCAA artM 738227 - 737559 - | arginine ABC transporter, permease protein TERM 952 738050 - 738039 - G 70 -3 -5.17744 | ATAGATTAAGAAAAA TTGT ACTA ACAA AGGTGTGCCAGTAAA artQ 738931 - 738227 - | arginine ABC transporter, permease protein TERM 953 738766 - 738742 - G 83 -6.4 -5.12474 | CATAATAGACAAAAA GAACCACCAG CATTT CTGGCAGTCC TCTAATTAGTGTTAC TERM 954 738871 - 738918 + g 79 -8.4 -4.12947 | opp_overlap 738877, overlap 738874 738875 ATCCGATAATAAGAG CAGAAATAGCAAGTGTGACCGT AGTC ACGGTCGCACCTGCTAGCGTTG TTATTTCATTCATTT TERM 955 738874 - 738915 + g 71 -6.5 -4.15884 | opp_overlap 738877, overlap 738871 738875 CGATAATAAGAGCAG AAATAGCAAGTGTGACCGT AGTC ACGGTCGCACCTGCTAGCG TTGTTATTTCATTCA TERM 956 738875 - 738914 + g 75 -10 -3.08446 | opp_overlap 738877, overlap 738874 738871 GATAATAAGAGCAGA AATAGCAAGTGTGACCGT AGTC ACGGTCGCACCTGCTAGC GTTGTTATTTCATTC TERM 957 738912 - 738877 - G 100 -17 -4.10178 | opp_overlap 738875 738874 738871 TAATAAGAGCAGAAA TAGCAAGTGTGACCGT AGTC ACGGTCGCACCTGCTA GCGTTGTTATTTCAT artI 739696 - 738962 - | arginine ABC transporter, substrate-binding protein artP 740439 - 739711 - | arginine ABC transporter, ATP-binding protein PMI0683 742009 - 740546 - | hypothetical protein TERM 958 741869 - 741857 - G 74 -6.3 -4.39696 | opp_overlap 741857 GTGTAAATCAACAAA TACAC AGC GTGTA TTTTGCCACCCTTGC TERM 959 742109 - 742076 - R 71 -6.9 -4.10437 | gap 1, opp_overlap 742085 CTATGAAGTAAAGAA CGCCATTAAGATTGGT GTG ACCAAACTTAAT-ACG AAACCATGCACAATT PMI0684 742963 - 742061 - | hypothetical protein TERM 960 744247 - 744262 + G 71 -4 -4.86731 | GCTTTCTGTGGCATG GGGATT ATTA AATCTC TTTTCTTTGCAACGC TERM 961 744517 - 744492 - g 86 -10.6 -3.85567 | AAGGGGAAACGGAAA TCTGGCTAAT GAACGA ATTAGCCAGA CAATGTAACTACTTC PMI0685 743309 - 744982 + | hypothetical protein TERM 962 744991 - 745018 + F 81 -10 -3.06605 | overlap 744989 CAATTAAGTCATTTT TCTATGCTTCTA TTTA TAGGGGCATAGA TATCTCATTGTGTTT TERM 963 745729 - 745719 - g 73 -6.8 -4.26076 | TCACTTTTATCAAAA CCCT TGA AGGG CAGACAGTCATTGCA macA 745124 - 746233 + | macrolide-specific efflux protein TERM 964 748066 - 748079 + G 76 -6.7 -4.4773 | GTGTTCCAGCCCACG GCACT GATA AGTGC TTTTGCTTGCTCTAC macB 746233 - 748176 + | macrolide-specific ABC-type efflux carrier TERM 965 748200 - 748234 + T 71 -8.1 -3.3071 | gap 1, opp_overlap 748200 748205 748206, overlap 748205 TAGTCTATAAAAGAT CAAAAGCCC-TATCTT TCAA AAGATAAGGGCTTTTA TTGGTATGATAATGT TERM 966 748234 - 748200 - T 81 -10.3 -2.88044 | gap 1, opp_overlap 748200 748205, overlap 748205 748206 TAGTCTATAAAAGAT CAAAAGCCC-TATCTT TCAA AAGATAAGGGCTTTTA TTGGTATGATAATGT TERM 967 748205 - 748229 + T 90 -8 -4.76075 | gap 1, opp_overlap 748200 748205 748206, overlap 748200 TATAAAAGATCAAAA GCCC-TATCTT TCAA AAGATAAGGGC TTTTATTGGTATGAT TERM 968 748229 - 748205 - T 85 -8 -4.58236 | gap 1, opp_overlap 748205 748200, overlap 748200 748206 TATAAAAGATCAAAA GCCC-TATCTT TCAA AAGATAAGGGC TTTTATTGGTATGAT TERM 969 748227 - 748206 - T 71 -8.1 -3.33315 | opp_overlap 748205 748200, overlap 748205 748200 ATAAAAGATCAAAAG CCCTATCTT TCAA AAGATAAGG GCTTTTATTGGTATG cspD 748548 - 748339 - | cold shock-like protein clpS 748838 - 749152 + | ATP-dependent Clp protease adaptor protein TERM 970 750001 - 749990 - g 73 -5.8 -4.59773 | opp_overlap 749990 GGTGATTTCGAAAAA CGCT TTAA AGCG TTATTGAAAACACTT clpA 749183 - 751477 + | ATP-dependent Clp protease ATP-binding subunit TERM 971 751467 - 751486 + T 76 -7.2 -4.20368 | opp_overlap 751467 751465 CTAAAAAAGAAGATA CCGTTATT TAAT AATAGCGG TTTATCTTAGGCTAA TERM 972 751510 - 751548 + T 100 -9 -5.75342 | gap 1, opp_overlap 751510 751508 AGGCTAAAAAGCAGA CACCACAGGT-CAGCAT CAATTC ATGCTTTGCCTGTGGTG TTTTTTTTCACCCGA infA 751815 - 751597 - | translation initiation factor IF-1 TERM 973 752055 - 752034 - R 76 -7.4 -4.31859 | overlap 752031 GCAATAAAATAACAA CATCCAAA CCACAC TTTGGATG TGCAAGATGAATTTT aat 752827 - 752135 - | leucyl/phenylalanyl-tRNA-protein transferase TERM 974 752723 - 752692 - G 71 -6 -4.31085 | gap 1, opp_overlap 752684, overlap 752685 752694 TATACCAAGGGAAAA TCCCCGTTTGATAAG CCT CTT-TCAAACGAGCA GGGGAAATATCGCCG TERM 975 752781 - 752753 - G 100 -14.7 -3.65314 | opp_overlap 752745 GCCAATTGCCAATAA CCCACTTGGCTCT TTT AAAGCCAAATGGG GGGCAGGAAAAGTCA cydC 754580 - 752829 - | ABC transporter, ATP-binding and permease protein cydD 756352 - 754583 - | ABC transporter, ATP-binding and permease protein TERM 976 756474 - 756455 - R 93 -10 -4.16943 | TGTTACATGGTAAAA GGCGCTAC TGAA ATAGCGCC TTGAAAGGAAGTGAG trxB 757453 - 756494 - | thioredoxin reductase TERM 977 757174 - 757192 + g 71 -6 -4.30177 | overlap 757188 CAAATAGGCGGAAAG GTCGGTTT TTC AGATCGAC TTTGTTGATATGGTC lrp 757996 - 758490 + | leucine-responsive regulator TERM 978 758556 - 758579 + F 100 -13.2 -3.28269 | opp_overlap 758552, overlap 758559 TTATGTATACAGTTT CAACGCTGGG TTAT CTCAGCGTTG TTCCGTTTAAACCTT TERM 979 758559 - 758576 + F 81 -9.1 -3.77832 | opp_overlap 758552, overlap 758556 TGTATACAGTTTCAA CGCTGGG TTAT CTCAGCG TTGTTCCGTTTAAAC TERM 980 759427 - 759414 - g 77 -8.1 -4.24342 | CGCGTCAGCAAGAAA TGGCG ATCA CGCCA CAACATGATGATATA TERM 981 759953 - 759921 - g 79 -11.3 -2.68034 | overlap 759920 759918 CATTAACTCAAACAG CCGCCGGTGTTGCCA GTG TGGCAACAGCAGCAA TAGTCAGTCACGGTG TERM 982 761347 - 761361 + G 72 -10 -2.55015 | overlap 761343 GAAAGATATCGGTGG GCAACC TGT GGTTGC TAACTTGGCTAAAAT TERM 983 761702 - 761675 - g 74 -6.2 -4.46531 | AACGAAAAAATTAAA GAAGCGGAAGCC ATGG GGCGTCCAATTC CAGATCCACTATGGA ftsK 758618 - 762421 + | cell division protein (DNA translocase) TERM 984 762511 - 762489 - f 100 -16.4 -2.62024 | opp_overlap 762491, overlap 762486 762485 TATCACTATAACTTA TACGCCGACA TGA TGTCGGCGTA ATCTCAGTCAGAGGC TERM 985 762491 - 762509 + F 100 -14.6 -2.64616 | opp_overlap 762489 762486 762485 TCACTATAACTTATA CGCCGACA TGA TGTCGGCG TAATCTCAGTCAGAG lolA 762534 - 763139 + | outer-membrane lipoprotein carrier protein TERM 986 764461 - 764428 - g 70 -9.8 -2.58999 | overlap 764427 GGGTTAGAGATCAAG CTTGCTGAGAAA TTAGACTGGC TTTCTCAGCAAG ATCAAAATAGTGTGA PMI0699 763150 - 764499 + | ATPase serS 764633 - 765922 + | seryl-tRNA synthetase TERM 987 765982 - 765954 - T 82 -11.1 -2.5294 | opp_overlap 765959, overlap 765959 CAGTGGTTATAATAT TAAAACCCCCTAT TAA ACAGGGGGTTTTT TAATGGTATAAAGAG TERM 988 765977 - 765959 - T 100 -11 -4.46656 | opp_overlap 765959, overlap 765954 GTTATAATATTAAAA CCCCCTAT TAA ACAGGGGG TTTTTTAATGGTATA TERM 989 765959 - 765977 + T 95 -8.8 -5.20216 | opp_overlap 765959 765954 GTTATAATATTAAAA CCCCCTAT TAA ACAGGGGG TTTTTTAATGGTATA PMI0701 766434 - 766102 - | hypothetical protein allD 766835 - 767884 + | ureidoglycolate dehydrogenase TERM 990 767927 - 767903 - T 100 -6.4 -5.85737 | opp_overlap 767903 ATATTAATAAAAAAA CAGCCATCCA TTAAT TAGGTGGCTG TTTTTGGGTTATCCA TERM 991 767903 - 767927 + T 80 -6.4 -4.78149 | opp_overlap 767903 ATATTAATAAAAAAA CAGCCATCCA TTAAT TAGGTGGCTG TTTTTGGGTTATCCA PMI0703 768862 - 767957 - | hypothetical protein TERM 992 769175 - 769193 + r 80 -7.4 -4.62069 | opp_overlap 769175 TTTTACATAAAAAAA GCAGTACA TTG TGCACTGC TTTTTAAAATGGGGG TERM 993 769193 - 769175 - R 100 -9.6 -5.71712 | opp_overlap 769175 TTTTACATAAAAAAA GCAGTACA TTG TGCACTGC TTTTTAAAATGGGGG pflA 769960 - 769220 - | pyruvate formate-lyase activating enzyme TERM 994 769544 - 769561 + g 82 -8.5 -4.21812 | opp_overlap 769528, overlap 769542 ACCAACCAGTTTTTG GTGAATG TCAT CATTCAC TTGTTTTAAATCCAG TERM 995 770011 - 769994 - R 100 -9.8 -4.96848 | opp_overlap 769994 CTGTCTAGATAAAAA GGCCCC AAAGTA GGGGCC TTTATTCTAAGCGAT TERM 996 769994 - 770011 + r 90 -9.8 -4.30987 | opp_overlap 769994 CTGTCTAGATAAAAA GGCCCC AAAGTA GGGGCC TTTATTCTAAGCGAT pflB 772350 - 770068 - | formate acetyltransferase focA 773259 - 772405 - | probable formate transporter TERM 997 773762 - 773808 + r 70 -6.1 -4.31185 | gap 1, opp_overlap 773786, overlap 773763 CACTTTTGACATATT TGACACTTTTGTCATT-TGACA TAAT TGTCATGGTGGCAAAATTGTCG TTATATTTTTTTATA TERM 998 773829 - 773860 + r 100 -14 -3.04398 | opp_overlap 773829 773834, overlap 773834 TTTTTTTATATATAA TAAAACACTCTACT TGTT AGTAGAGTGTTTTG ATTTTAAACAAAGCG TERM 999 773860 - 773829 - R 95 -11.8 -3.58726 | opp_overlap 773829 773834, overlap 773834 TTTTTTTATATATAA TAAAACACTCTACT TGTT AGTAGAGTGTTTTG ATTTTAAACAAAGCG TERM 1000 773834 - 773855 + r 100 -11.7 -4.67038 | opp_overlap 773829 773834, overlap 773829 TTATATATAATAAAA CACTCTACT TGTT AGTAGAGTG TTTTGATTTTAAACA TERM 1001 773855 - 773834 - R 100 -11.7 -4.87592 | opp_overlap 773834 773829, overlap 773829 TTATATATAATAAAA CACTCTACT TGTT AGTAGAGTG TTTTGATTTTAAACA PMI0707 775687 - 773930 - | hypothetical protein ansB 775915 - 776952 + | L-asparaginase II precursor TERM 1002 776981 - 777015 + T 100 -16.7 -4.26003 | opp_overlap 776981 776986, overlap 776986 TTTTTAGTTAAATCA GAAAACCATCTGCTG ATAAA TAGCAGATGGTTTTC TTTGTTAAATATTAT TERM 1003 777015 - 776981 - T 100 -16 -2.94144 | opp_overlap 776981 776986, overlap 776986 TTTTTAGTTAAATCA GAAAACCATCTGCT GATAAAT AGCAGATGGTTTTC TTTGTTAAATATTAT TERM 1004 776986 - 777010 + T 100 -10.8 -5.10665 | opp_overlap 776981 776986, overlap 776981 AGTTAAATCAGAAAA CCATCTGCTG ATAAA TAGCAGATGG TTTTCTTTGTTAAAT TERM 1005 777010 - 776986 - T 93 -10.1 -4.62168 | opp_overlap 776986 776981, overlap 776981 AGTTAAATCAGAAAA CCATCTGCT GATAAAT AGCAGATGG TTTTCTTTGTTAAAT PMI0709 778295 - 777027 - | haemagglutinin TERM 1006 777816 - 777832 + g 71 -9.5 -2.83191 | overlap 777815 777819 AGAGATTGATGTTTC TAATCGG TAA CCGATTA ATTCTCTATTATCGA TERM 1007 778094 - 778104 + g 89 -6.8 -5.2112 | opp_overlap 778094 ATTTATTATAAGAAA TGCC TTT GGCA TTTTTTGGTGCTATT TERM 1008 778104 - 778094 - G 76 -6.8 -4.35885 | opp_overlap 778094 ATTTATTATAAGAAA TGCC TTT GGCA TTTTTTGGTGCTATT TERM 1009 778414 - 778396 - R 100 -7.5 -5.8096 | opp_overlap 778396 778410 TATAAAAAATAAAAA GGCTATT TTTTT AATAGCC TTTTGGGTTATATGT TERM 1010 778396 - 778414 + r 80 -7.5 -4.3487 | opp_overlap 778396, overlap 778410 TATAAAAAATAAAAA GGCTATT TTTTT AATAGCC TTTTGGGTTATATGT PMI0710 779862 - 778432 - | MFS-family transporter serC 779999 - 781087 + | phosphoserine aminotransferase TERM 1011 781113 - 781129 + F 91 -9.4 -4.51097 | opp_overlap 781113 TTCACTGCTGCAAAA CCTGCC TTATT GGCAGG TTTTCTGATAATTAA TERM 1012 781129 - 781113 - f 86 -9.4 -4.08767 | opp_overlap 781113 TTCACTGCTGCAAAA CCTGCC TTATT GGCAGG TTTTCTGATAATTAA TERM 1013 781730 - 781720 - g 73 -6.8 -4.1711 | opp_overlap 781727 ATTATCTTGAACAAA CGGA CTA TCCG CCACTACGTGTTTGT aroA 781284 - 782570 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1014 782591 - 782628 + F 72 -5.1 -4.84642 | gap 1, opp_overlap 782582, overlap 782617 ATAGCATCAATTAAA TCGATAGTATTG-GCT TTTCTCT AGTACGATACTATCGA TTTTCTTAATTTAAG TERM 1015 783375 - 783400 + G 71 -9.9 -2.87243 | gap 1, overlap 783372 AATGTTAACTTTGAA CGC-CTTTTATC CGA GATAAAAGAGCG TGATTATCGTGATAG cmk 782859 - 783536 + | cytidylate kinase rpsA 783718 - 785391 + | 30S ribosomal protein S1 TERM 1016 785408 - 785430 + F 89 -10.6 -3.94409 | opp_overlap 785410, overlap 785410 TTAAGTTATTAACGG AAGGCAACGA GAG TCGTTGCCTG TTTATCGGTAGTCTA TERM 1017 785410 - 785428 + F 100 -13.2 -3.55824 | opp_overlap 785410, overlap 785408 AAGTTATTAACGGAA GGCAACGA GAG TCGTTGCC TGTTTATCGGTAGTC TERM 1018 785428 - 785410 - f 100 -13.2 -3.21466 | opp_overlap 785410 785408 AAGTTATTAACGGAA GGCAACGA GAG TCGTTGCC TGTTTATCGGTAGTC ihfB 785456 - 785743 + | integration host factor beta-subunit TERM 1019 785790 - 785805 + F 81 -4.6 -5.5074 | overlap 785783 AAACTTTTTCAAAAA CGGTGC TTCG GTGCCG TTTTTTATTGGGTTA PMI0717 786165 - 788534 + | hypothetical protein TERM 1020 788671 - 788700 + G 75 -9.5 -3.41738 | opp_overlap 788671, overlap 788651 788669 CAGCAGGCGCATTAA TCATAAATGCG GGTGTTGA CGCATTTATGA TCTCTTTATTGAAAC TERM 1021 788700 - 788671 - g 73 -9.5 -3.15861 | opp_overlap 788651 788671 788669 CAGCAGGCGCATTAA TCATAAATGCG GGTGTTGA CGCATTTATGA TCTCTTTATTGAAAC msbA 788571 - 790316 + | lipid A export ATP-binding/permease protein TERM 1022 790507 - 790497 - g 73 -6.8 -4.19953 | opp_overlap 790497 790496 790490, overlap 790489 GAGGTAATGGTAAAA CACC AGT GGTG ATTTGGCTTGTTGAG TERM 1023 790721 - 790709 - g 76 -9.1 -3.66999 | opp_overlap 790707 AGTGATGCAGTCAAA GCGCT ATT AGCGC AATATGATCTTGATA TERM 1024 790848 - 790869 + G 70 -8.7 -3.34209 | overlap 790846 790841 GGTTGCCCGCAGGGC CGATGAGAG AGCG CGCTCATCG TCTTGATTCTGTTAA lpxK 790313 - 791314 + | tetraacyldisaccharide 4'-kinase PMI0720 791810 - 792025 + | cold shock protein TERM 1025 792282 - 792265 - f 71 -5.5 -4.70046 | opp_overlap 792266, overlap 792266 GACAAAACGATAAAA GGCCACA TTAT TGTGGCT TTTTTGTTGCTTATA TERM 1026 792266 - 792281 + F 100 -9 -5.57396 | opp_overlap 792265 792266 ACAAAACGATAAAAG GCCACA TTAT TGTGGC TTTTTTGTTGCTTAT TERM 1027 792281 - 792266 - f 78 -9 -3.40401 | opp_overlap 792266, overlap 792265 ACAAAACGATAAAAG GCCACA TTAT TGTGGC TTTTTTGTTGCTTAT TERM 1028 792476 - 792491 + G 71 -7.6 -3.86252 | ATTATTGCTTGCCCA GTTTGC CATG GCAAAC TTATCTTTGATAAAG PMI0721 792440 - 792619 + | hypothetical protein kdsB 792624 - 793385 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1029 793414 - 793440 + T 100 -13.8 -4.32067 | opp_overlap 793406, overlap 793411 TTGCAAATTAATGTT TAACGGCACTGG TAT TCAGTGCCGTTG TTGTTTTCTACCATC PMI0723 794339 - 793509 - | hypothetical protein TERM 1030 794804 - 794792 - g 76 -4.7 -5.17786 | opp_overlap 794793 794794, overlap 794793 CAACAAAAGGAAAAA TCCGC CAA GCGGT GATTTGGGATGATTT TERM 1031 794803 - 794793 - g 70 -8.2 -3.68231 | opp_overlap 794793 794794, overlap 794792 AACAAAAGGAAAAAT CCGC CAA GCGG TGATTTGGGATGATT TERM 1032 795305 - 795321 + G 72 -9.5 -3.04398 | opp_overlap 795320, overlap 795304 TTTATCAATGGTTAG CGTCATT TTC AATGACG ATTTTAGGAAAAACG TERM 1033 795397 - 795420 + G 70 -8.9 -3.21276 | opp_overlap 795419, overlap 795375 795395 AATAAAGATTTTCCA GCGTTGCTT GCCTTA GAGCAACGC TATTGTCGGCAAGAG smtA 794719 - 795492 + | S-adenosylmethionine-dependent methyltransferase TERM 1034 795571 - 795604 + GF 78 -8.9 -3.37493 | overlap 795600 GATTTCTCTATTTCA CTGCCACCGGAAAGG TTAG CTTTTTTGATGGCAG TTGCTGTATTAAACA TERM 1035 796090 - 796102 + GF 73 -7.7 -3.59262 | opp_overlap 796089 796090 CTATTAAACCAAGAT TGGCA AGC TGCCA TTTCAAACTGTGAAC TERM 1036 796593 - 796574 - gf 72 -5.8 -4.42206 | overlap 796566 AAGTAAATGAACAAA TTGCTCAA TGGG TTGAACAA GAGCTGGCTGCTTAT mukF 795502 - 796824 + | chromosome partition protein mukE 796784 - 797536 + | chromosome partition protein TERM 1037 798243 - 798223 - g 75 -5.4 -4.71828 | overlap 798224 AGCGGAGTAAGAAAA GCCTTCCA AGATA TGGAAGGG GCATTACGTGAAAAC TERM 1038 798242 - 798224 - g 72 -8.9 -3.42374 | overlap 798223 GCGGAGTAAGAAAAG CCTTCCA AGATA TGGAAGG GGCATTACGTGAAAA TERM 1039 801968 - 801955 - g 71 -3.9 -4.86939 | CAACAAAGTGAAAAA GATAA ACAT TTATC CGAAAATATTGCAGA mukB 797533 - 801990 + | chromosome partition protein cat 802926 - 802273 - | chloramphenicol acetyltransferase TERM 1040 802702 - 802719 + g 80 -7.7 -4.42806 | CCCGTCTTTCATTGC CATGCGG AATT CTGCATG TTTATTTACCAATAG TERM 1041 803013 - 803049 + H 71 -8.1 -3.19038 | opp_overlap 803019, overlap 803019 GAACCTCTATCTGTA GATAAACCCATAACCTA TGA TAGGTAATAGGTTTTTC TTGGCTAATTTTAAA TERM 1042 803019 - 803043 + H 80 -5.7 -5.11063 | opp_overlap 803019, overlap 803013 CTATCTGTAGATAAA CCCATAACCTA TGA TAGGTAATAGG TTTTTCTTGGCTAAT TERM 1043 803043 - 803019 - H 77 -7.9 -4.04206 | opp_overlap 803019 803013 CTATCTGTAGATAAA CCCATAACCTA TGA TAGGTAATAGG TTTTTCTTGGCTAAT TERM 1044 803146 - 803171 + H 100 -10.5 -5.04249 | opp_overlap 803145, overlap 803142 ACTTAGATAATAACG GCGCTATCTGC TTTC GTAGATAGTGC TTTCTTTTTTCAAAG TERM 1045 803516 - 803501 - g 85 -5.4 -5.24449 | CAGAAATTGAAAAAA GCTTAG AAGG CCAAGC ACCAATGGCGGTAGG TERM 1046 803638 - 803625 - g 82 -8.1 -4.62783 | CAGTTATCTGAAAAA CCCAG AATT CTGGG AAAAAATGAACAACG aphA 803332 - 804045 + | class B acid phosphatase precursor TERM 1047 804078 - 804095 + F 100 -11.3 -5.80951 | GACCTTTATTTGTTA GGCGTAG GAAA CTACGCC TTTTTTATTTTGGGT PMI0730 804395 - 806110 + | hypothetical protein TERM 1048 806133 - 806161 + F 100 -10.5 -5.252 | opp_overlap 806133 806137 GATGGCTAACAACAA TAAAGAGTAAGTA TTA TGCTTGCTCTTTA TTTTTTATAAAAATC PMI0731 806448 - 806996 + | hypothetical protein PMI0732 807046 - 807696 + | metallo-beta-lactamase superfamily protein TERM 1049 807721 - 807739 + T 100 -11.8 -5.28176 | AAGCAAACTCTTTAA GCCCTTTA TAT TAAAGGGC TTTTTTATAGATAAA PMI0733 808262 - 807789 - | hypothetical protein PMI0734 810089 - 808353 - | hypothetical protein PMI0735 811437 - 810082 - | hypothetical protein TERM 1050 810243 - 810258 + g 76 -4.6 -5.13741 | overlap 810245 810253 CTGTTTCAATTTGTA CAGCGA GTTG TCGCAG TTTTTCTTCGATTGG TERM 1051 810495 - 810510 + g 81 -5.4 -5.11063 | GCTCTGCATCTGTAG GCCAAG CGTT TTTGGC TTTTTCTTGCATCGT PMI0736 815023 - 811475 - | hypothetical protein TERM 1052 812478 - 812492 + g 72 -10 -2.51438 | opp_overlap 812480, overlap 812477 812476 GTTAATAAACGGTAA GATGGC TCA GCCATC AGTGTTTTTTGTTCA TERM 1053 814222 - 814242 + g 77 -8.4 -3.91897 | GACTATTAAATGTCA TGCGTATT TCTTC AATACGCA TTTGTAAATCAGCAA PMI0737 816489 - 815026 - | hypothetical protein PMI0738 817145 - 816495 - | hypothetical protein PMI0739 817935 - 817147 - | hypothetical protein TERM 1054 817609 - 817594 - G 76 -9 -3.65112 | AGGCAAACTATACAA TCCGGT GTTC ACCGGA AGCTGTGAAATAAAA PMI0740 820650 - 817939 - | probable ATPase TERM 1055 820452 - 820472 + g 74 -4 -5.1101 | opp_overlap 820453, overlap 820453 CTAATAACTCTGATA ACGCATTA ATATC TAATGCGC TTTTTTGACTGATCA PMI0741 821414 - 820659 - | hypothetical protein PMI0742 822765 - 821407 - | hypothetical protein PMI0743 823318 - 822767 - | lipoprotein PMI0744 824588 - 823320 - | phosphopeptide-binding protein TERM 1056 823730 - 823744 + g 71 -5 -4.61648 | CAATTGGGCGTAATT GCTTAT CTT GTAAGC TTTCTTGTTGTTGTT PMI0745 825630 - 824593 - | hypothetical protein PMI0746 827369 - 825594 - | hypothetical protein TERM 1057 827137 - 827166 + gr 84 -10.2 -3.45366 | overlap 827159 GGCACAGGGCGTGCG TAGTTTGGCCAA AGCATA TTGGCTAAACTA TTAGTTAATTCAGGA PMI0747 827808 - 827377 - | hypothetical protein PMI0748 829313 - 827814 - | hypothetical protein PMI0749 829813 - 829313 - | hypothetical protein TERM 1058 831318 - 831330 + H 72 -4.9 -4.84363 | opp_overlap 831318 831327, overlap 831324 831327 AAAGGACAGTATAAT TCAAT GTA ATTGA TTTTTAATACTTTAA PMI0750 831710 - 832228 + | hypothetical protein TERM 1059 832234 - 832263 + F 86 -7.1 -4.79752 | opp_overlap 832231, overlap 832237 832238 CGAAGCGTAATACCG TTATGACGAGTCC TTGG GGGCTCGTCCTTA TTTTGTATTGTTCCC TERM 1060 832237 - 832260 + F 88 -8.8 -4.47977 | opp_overlap 832231, overlap 832234 832238 AGCGTAATACCGTTA TGACGAGTCC TTGG GGGCTCGTCC TTATTTTGTATTGTT TERM 1061 832238 - 832259 + F 90 -12.3 -3.26346 | opp_overlap 832231, overlap 832237 832234 GCGTAATACCGTTAT GACGAGTCC TTGG GGGCTCGTC CTTATTTTGTATTGT PMI0751 832312 - 834462 + | RHS accessory genetic element (VgrG-like protein) TERM 1062 834818 - 834806 - g 74 -4.9 -4.73617 | opp_overlap 834806 AAAACAAATAATAAA TAATG CGA CATTA TCATGTGTTGAACAA PMI0752 834465 - 834995 + | hypothetical protein PMI0753 835010 - 836065 + | hypothetical protein PMI0754 836068 - 837093 + | hypothetical protein TERM 1063 837227 - 837256 + G 70 -3.5 -4.83615 | CTAACACCTCTAGCG CAGATGCTTTATC AAAT GGTACAGCGACTG TTTTTATCCGAAATA TERM 1064 837951 - 837936 - g 79 -10.4 -3.53811 | opp_overlap 837944 TCCAGGTTGGGGAAA TGCGGC AATG GCCGCA TGGACACTTGGTGAT PMI0755 837094 - 838668 + | hypothetical protein PMI0756 838672 - 839634 + | hypothetical protein TERM 1065 840734 - 840722 - g 70 -3.4 -4.89233 | TATTAATATTAAAAA GGTT AAAGA AACC ATAAAGTTATTGAAC PMI0757 839658 - 840929 + | hypothetical protein PMI0758 840926 - 841318 + | thioredoxin TERM 1066 841440 - 841421 - T 95 -10.6 -4.18094 | CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGGGG ATAGGGGATATAAGG PMI0759 841885 - 841469 - | transposase TERM 1067 842541 - 842528 - g 75 -8.1 -4.06502 | CAGTTTTAAAGTAAA CCAGC GAAA GCTGG CAAGGCTTCAACGGA PMI0760 841908 - 843014 + | transposase TERM 1068 844089 - 844107 + G 76 -11 -2.71681 | opp_overlap 844088, overlap 844091 TGGGAGTACAATGAG CACGGCGA TAT TCGTCGTG TGATTGACCCGCTTG PMI0761 843162 - 845711 + | Rhs-family protein TERM 1069 845828 - 845843 + G 74 -4.8 -4.8269 | opp_overlap 845828 AAACATTGGGCCAAA TATATC AAGG GATATA TTTTTACTGGTTGTG PMI0762 845795 - 846757 + | hypothetical protein TERM 1070 847132 - 847101 - T 100 -9.5 -5.77677 | opp_overlap 847101 TAAAACAATAAAAAA CCCAACAACGTAT CTAATT AAACGCTGTTGGG TTATAAAACGTGTTA aspC 848372 - 847182 - | aspartate aminotransferase TERM 1071 848679 - 848662 - R 100 -9.9 -5.65927 | opp_overlap 848662 TAGGCAAATAAAAAA GCAACAC CGAA GTGTTGC TTTTCAAATCAATTA TERM 1072 848662 - 848679 + r 93 -9.9 -4.15453 | opp_overlap 848662 TAGGCAAATAAAAAA GCAACAC CGAA GTGTTGC TTTTCAAATCAATTA ompF 849840 - 848725 - | outer membrane porin TERM 1073 849004 - 849017 + g 70 -3.1 -4.90525 | ATACTGTGCAGTTAA CTCGA TATT TTGAG TTTTGTTTGCAATTG TERM 1074 850089 - 850106 + r 90 -11.3 -3.47573 | opp_overlap 850089 CCATGCATAAAAAAA GCCAACC CTGA GGTTGGC TTCTGGTATAACTAA TERM 1075 850106 - 850089 - R 100 -11.3 -5.64274 | opp_overlap 850089 CCATGCATAAAAAAA GCCAACC CTGA GGTTGGC TTCTGGTATAACTAA asnS 851582 - 850182 - | asparaginyl-tRNA synthetase TERM 1076 851464 - 851452 - G 72 -9.1 -3.34227 | GGATTAAAGCAGGAA CCGTC ATA GACGG TAAGGAATGAGATAC TERM 1077 851638 - 851648 + r 76 -5.4 -5.10968 | AAATTCATTCTGCCC CTGT CGG ACAG TTTTTCTATGTTACT TERM 1078 851814 - 851792 - R 100 -10.6 -4.8048 | opp_overlap 851792 851796, overlap 851796 GGGTGATAGCAAAAA GAAAGGGCAA TAT TGGCCCTTTC TTTATAGATAGAATA TERM 1079 851792 - 851814 + r 89 -10.6 -3.92373 | opp_overlap 851792 851796, overlap 851796 GGGTGATAGCAAAAA GAAAGGGCAA TAT TGGCCCTTTC TTTATAGATAGAATA TERM 1080 851810 - 851796 - R 76 -5.6 -4.94262 | opp_overlap 851792 851796, overlap 851792 GATAGCAAAAAGAAA GGGCAA TAT TGGCCC TTTCTTTATAGATAG TERM 1081 851796 - 851810 + r 71 -5.6 -4.57482 | opp_overlap 851796 851792, overlap 851792 GATAGCAAAAAGAAA GGGCAA TAT TGGCCC TTTCTTTATAGATAG pncB 853076 - 851862 - | nicotinate phosphoribosyltransferase TERM 1082 854127 - 854113 - g 75 -2.8 -5.20216 | overlap 854115 GACATCACTAAAAAA TGCCAT GAA ATGGGA TGAGTCACGCTTTAA pepN 853418 - 856033 + | aminopeptidase N TERM 1083 856113 - 856094 - T 73 -9.3 -2.9834 | opp_overlap 856094 AGCATGATAATTAGA TCCCCAG CATATT CTGGGGA TTTTTTATGGTAAGT TERM 1084 856094 - 856113 + T 95 -9.3 -5.31877 | opp_overlap 856094 AGCATGATAATTAGA TCCCCAG CATATT CTGGGGA TTTTTTATGGTAAGT PMI0770 857226 - 856195 - | hypothetical protein TERM 1085 856937 - 856915 - G 100 -16.4 -3.18452 | ATGAGTCCAACTTAA TTCGTGACGC ACT GCGTCACGAA TTGGAAATGTGAGAT pyrD 857583 - 858593 + | dihydroorotate dehydrogenase TERM 1086 858610 - 858636 + F 70 -8.1 -3.11584 | opp_overlap 858610 858604 858615, overlap 858608 858608 TACATTCAATAATCA GTTAAGGGC TTTTCTTCT GCCCTTAAC TCGTTTATATTGCCT TERM 1087 858852 - 858874 + G 77 -10.6 -2.80796 | overlap 858843 858851 TTGGTATTTTGATGA CGAGCAACAA AAG TTGATGCTCG ATTTAGCTAATGGAA PMI0772 858808 - 859359 + | hypothetical protein TERM 1088 859388 - 859360 - T 70 -8.4 -3.14261 | opp_overlap 859360 859365, overlap 859365 GAAAAAGTCATCTAA TAAAAGAGTAAA AAGGA CTTACTCTTTTA TTTTCACTTATTGTT TERM 1089 859360 - 859388 + T 82 -7.7 -4.38637 | opp_overlap 859360 859365, overlap 859365 GAAAAAGTCATCTAA TAAAAGAGTAA AAAGGAC TTACTCTTTTA TTTTCACTTATTGTT TERM 1090 859365 - 859383 + T 71 -3.2 -5.13343 | opp_overlap 859365 859360, overlap 859360 AGTCATCTAATAAAA GAGTAA AAAGGAC TTACTC TTTTATTTTCACTTA TERM 1091 859572 - 859606 + T 71 -6.7 -3.96624 | opp_overlap 859562 859578, overlap 859597 GCAGATCATGCAAAA TAAAAAGAAGATAAG GACAG TTTACCTTCTTTTTA TTTGTGATAAAGATA TERM 1092 859600 - 859578 - T 72 -2.8 -5.48213 | opp_overlap 859572 859597, overlap 859562 CATGCAAAATAAAAA GAAGATAA GGACAGT TTACCTTC TTTTTATTTGTGATA PMI0773 860768 - 859626 - | iron-sulfur binding protein TERM 1093 861711 - 861699 - g 70 -9.1 -3.19026 | TATGGCAAGAGCCAA CGCAC GTC GTGCG GATGTGGCCGATTTA PMI0774 860878 - 862992 + | RNA methylase uup 862999 - 864930 + | ABC transporter ATP-binding protein TERM 1094 864964 - 864948 - f 100 -13.7 -3.42354 | opp_overlap 864948 TATGCCAACTCATAA CGGGGCA TAA TGCCCCG TTTTAGTCTCTATAC TERM 1095 864948 - 864964 + F 100 -13.7 -4.41353 | opp_overlap 864948 TATGCCAACTCATAA CGGGGCA TAA TGCCCCG TTTTAGTCTCTATAC TERM 1096 866094 - 866112 + G 78 -3.8 -5.20333 | overlap 866099 GTTGAATATGTAGGG CGTTGGTC AAT GATTGACG TTTTTGTTATCGCTG pqiA 865023 - 866312 + | paraquat-inducible membrane protein A pqiB 866305 - 867957 + | paraquat-inducible protein B PMI0778 867957 - 868529 + | lipoprotein protein TERM 1097 868557 - 868584 + F 100 -8.5 -5.45652 | opp_overlap 868557 GTAATATAAGAATAA CCAATGCCTGA CTAAAA TCAGGTGTTGG TTTTTTATTCGAGAT TERM 1098 869315 - 869337 + F 73 -8 -3.47078 | opp_overlap 869307 869312 869311 869314 869319, overlap 869307 869314 869312 869319 ATAGATATAAATTAT TTAATTATAT TAA ATATAATTAA TTGTAATCTAAGGTG rmf 869509 - 869679 + | ribosome modulation factor TERM 1099 869833 - 869866 + T 83 -10.5 -3.33162 | opp_overlap 869835 869841, overlap 869835 869841 CAACTGTGAATTGGA AATAAAAAGGTCTAC CGCG GTAGGCCTTTTTATG TTGTAAAGTACGGTA TERM 1100 869864 - 869835 - T 89 -10.9 -3.66356 | opp_overlap 869833 869835 869841, overlap 869841 ACTGTGAATTGGAAA TAAAAAGGTCTAC CGCG GTAGGCCTTTTTA TGTTGTAAAGTACGG TERM 1101 869835 - 869864 + T 100 -13.1 -3.23393 | opp_overlap 869835 869841, overlap 869833 869841 ACTGTGAATTGGAAA TAAAAAGGTCTAC CGCG GTAGGCCTTTTTA TGTTGTAAAGTACGG TERM 1102 869858 - 869841 - T 80 -5.5 -5.29846 | opp_overlap 869835 869833 869841, overlap 869835 AATTGGAAATAAAAA GGTCTAC CGCG GTAGGCC TTTTTATGTTGTAAA TERM 1103 869841 - 869858 + T 91 -7.7 -5.1523 | opp_overlap 869841 869835, overlap 869835 869833 AATTGGAAATAAAAA GGTCTAC CGCG GTAGGCC TTTTTATGTTGTAAA TERM 1104 869967 - 869942 - T 100 -7.6 -5.56263 | opp_overlap 869940 869942 ACCATAAAAGAAAAA GCCTAATCTC ATCGAA GAGAATAGGC TCTTATCTATCTATG TERM 1105 869942 - 869967 + T 71 -7.6 -3.40967 | opp_overlap 869942, overlap 869940 ACCATAAAAGAAAAA GCCTAATCTC ATCGAA GAGAATAGGC TCTTATCTATCTATG fabA 870513 - 869995 - | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase PMI0783 872339 - 870597 - | hypothetical protein TERM 1106 872239 - 872223 - G 72 -8.7 -3.494 | TAAGCTTTCATATAA GCGAGGT TGA ACCTCAC GAAGTGAAGATGCAG PMI0784 872704 - 873171 + | hypothetical protein TERM 1107 873299 - 873272 - T 100 -11.4 -4.31692 | opp_overlap 873278, overlap 873278 AAGTCATCATCAAAA GAAAAACCCTGC CGAA GCAGGGTTTTTT TAGAATTCATTACAG TERM 1108 873293 - 873278 - T 100 -10.4 -5.50723 | opp_overlap 873278, overlap 873272 TCATCAAAAGAAAAA CCCTGC CGAA GCAGGG TTTTTTTAGAATTCA TERM 1109 873278 - 873293 + T 100 -10.4 -5.47399 | opp_overlap 873278 873272 TCATCAAAAGAAAAA CCCTGC CGAA GCAGGG TTTTTTTAGAATTCA ompA 874424 - 873336 - | outer membrane protein A TERM 1110 873453 - 873465 + g 70 -3.3 -4.86731 | overlap 873454 GTTGTCACAAGTGTT GCCAG TTA CTGGG TTTTCTTTACCACGA TERM 1111 874458 - 874468 + r 71 -6.8 -4.1023 | overlap 874443 CCAAGTTAGGCATTT GGCT TTA AGCC TTATTATTTGCCCTT sulA 875327 - 874773 - | cell division inhibitor PMI0787 875554 - 876168 + | hypothetical protein TERM 1112 876246 - 876287 + T 100 -11.3 -4.87665 | gap 1 AAGCCAATAGAGTCT GTTATTTTCTCTAAGGTTCT AAT AGAAA-TTAGAGAAAATAAC TTTTTATCCATCAAG PMI0788 878472 - 876298 - | hypothetical protein TERM 1113 880550 - 880587 + G 71 -5.1 -4.53705 | gap 1, opp_overlap 880550 ACAAGAGCAAAAAAA CAAGTATGGTTATTATTT AAT AAACAACAACCAT-CTTG TTTTGTGTCAGAGTT TERM 1114 880587 - 880550 - g 100 -9.5 -5.6473 | gap 1, opp_overlap 880550 ACAAGAGCAAAAAAA CAAGTATGGTTATTATTT AAT AAACAACAACCAT-CTTG TTTTGTGTCAGAGTT helD 878588 - 880639 + | helicase IV mgsA 881102 - 880644 - | methylglyoxal synthase PMI0791 881242 - 881655 + | CoA-binding protein TERM 1115 881690 - 881670 - T 100 -11.2 -4.36262 | opp_overlap 881670 ATAGGCAGAGTAAAA TCGCCGAA ATGTA TTCGGCGA TTATCATTAAGGTTA TERM 1116 881670 - 881690 + T 87 -11.2 -3.52539 | opp_overlap 881670 ATAGGCAGAGTAAAA TCGCCGAA ATGTA TTCGGCGA TTATCATTAAGGTTA PMI0792 882040 - 881720 - | hypothetical protein TERM 1117 882511 - 882490 - g 78 -7.3 -4.33153 | opp_overlap 882490 GCCAATATGAAGAAA TGGCAGACT TTTC AATCCGCCA TTATGCATCTTAGTA PMI0793 882240 - 882524 + | acylphosphatase PMI0794 882856 - 882527 - | sulfite reductase PMI0795 883315 - 883845 + | acetyltransferase TERM 1118 883924 - 883903 - T 72 -5.9 -4.46493 | overlap 883898 CTAAATACACCAAAA TAAGCCCCA GTCC TAGAGCTTA TTTTTAAATTAACGA TERM 1119 883971 - 884012 + T 73 -9.1 -2.83258 | opp_overlap 883974 883979, overlap 883965 883971 883974 883979 TTAACAATCGTTAAT GTACTAAATGATGAATA AGATATTG TATTCATCATTTAGTAG CTTATTAACTCTATT TERM 1120 883971 - 884013 + T 80 -8.9 -3.73904 | gap 1, opp_overlap 883974 883979, overlap 883971 883965 883974 883979 TTAACAATCGTTAAT G-TACTAAATGATGAATA AGATATTG TATTCATCATTTAGTAGC TTATTAACTCTATTT TERM 1121 884009 - 883974 - T 82 -10.8 -2.5409 | opp_overlap 883971 883971 883965 883974 883979, overlap 883979 ACAATCGTTAATGTA CTAAATGATGAATA AGATATTG TATTCATCATTTAG TAGCTTATTAACTCT TERM 1122 883974 - 884009 + T 82 -10.8 -2.66869 | opp_overlap 883974 883979, overlap 883971 883971 883965 883979 ACAATCGTTAATGTA CTAAATGATGAATA AGATATTG TATTCATCATTTAG TAGCTTATTAACTCT PMI0797 884418 - 884080 - | hypothetical protein PMI0798 884759 - 884427 - | hypothetical protein TERM 1123 884944 - 884979 + H 100 -7.4 -5.58209 | gap 1, opp_overlap 884962 884974, overlap 884954 AGCTCTAACTATTTG TTTTTATTTACTTAAAA ATA TTTTAA-TAAATAAAAA TTTTTTTAAGTTTAG cbpA 885114 - 886058 + | curved DNA-binding protein cbpM 886058 - 886363 + | chaperone-modulator protein PMI0801 886508 - 887404 + | LysR-family transcriptional regulator TERM 1124 887439 - 887407 - T 70 -6.5 -4.18697 | opp_overlap 887411, overlap 887409 887424 AAAAGTAGGTTAAAA CATATAGGTGATA AAAATAA TATCACCTATATT ACGATTTAAATTGGT TERM 1125 887437 - 887409 - T 80 -9.1 -3.68036 | opp_overlap 887411, overlap 887407 887424 AAGTAGGTTAAAACA TATAGGTGATA AAAATAA TATCACCTATA TTACGATTTAAATTG dkgB 888263 - 887460 - | 2,5-diketo-D-gluconic acid reductase B PMI0803 888813 - 890321 + | exported peptidase TERM 1126 890351 - 890380 + T 76 -3.6 -5.4659 | opp_overlap 890351 TATAAATATTAAAAA GATCTCAAGATG CGTAAT CAGATTGAGATC TTTTTATTTCTATTA rob 891296 - 890400 - | right origin-binding protein PMI0805 891648 - 891980 + | hypothetical protein TERM 1127 892002 - 892026 + F 100 -13 -4.71382 | opp_overlap 892006, overlap 892006 GATTATTTATTGAGA TAAAGGCGAG CTAGA CTCGCCTTTA TTTTTAAGTCATTAT TERM 1128 892022 - 892006 - f 90 -10.1 -4.06678 | opp_overlap 892002 892006 ATTTATTGAGATAAA GGCGAGC TAG ACTCGCC TTTATTTTTAAGTCA TERM 1129 892006 - 892022 + F 100 -9.4 -4.89063 | opp_overlap 892006, overlap 892002 ATTTATTGAGATAAA GGCGAG CTAGA CTCGCC TTTATTTTTAAGTCA PMI0806 892274 - 893131 + | hydrolase TERM 1130 893178 - 893215 + F 77 -8.7 -3.67141 | opp_overlap 893173 893178, overlap 893173 893211 GGTATAAATATATCA GTAGATATTGATTGTTT TGTA AAATTATCAGTATCTAC TTTGAGTAGGCTTAT TERM 1131 893330 - 893300 - f 79 -4.9 -5.26158 | opp_overlap 893300, overlap 893304 CAAATAAAAAATAAA TTTACACTTCTAT AAAAA ATAAAAGTGAAAA TAGTTTGCTATAAAA cspB 893546 - 893758 + | cold shock protein TERM 1132 893849 - 893834 - f 93 -9 -4.8384 | opp_overlap 893834 GAAATAACTTAAAAA CCTCAC TGAT GTGAGG TTTTTTTATATCTAT TERM 1133 893834 - 893849 + F 100 -9 -5.77988 | opp_overlap 893834 GAAATAACTTAAAAA CCTCAC TGAT GTGAGG TTTTTTTATATCTAT TERM 1134 893959 - 893946 - f 75 -2.5 -5.61277 | opp_overlap 893946 CATAAAAAAAGAAAA TAAAA ATAA TTTTA CTTACTTTGCTATTA TERM 1135 894809 - 894836 + G 76 -2.1 -5.47218 | gap 1, overlap 894835 ACCAGATCAAGATTT TGGCTTAAAAGG AACCA CCTTTTCA-CCA TTTTTTTCGGTGAAG ddg 894201 - 895127 + | cold-induced palmitoleoyl transferase TERM 1136 895158 - 895136 - f 100 -12.1 -5.84381 | TTATTAATAAAAAAA GACCAACAC ATTAA GTGTTGGTC ACAGTAAATACTGGA PMI0809 895392 - 896147 + | hypothetical protein TERM 1137 896642 - 896625 - g 77 -8.5 -3.7956 | CAAAGAATTTAACAA GAGGTAA GCCA TTACCTC CAGGTATTGCGAAAA TERM 1138 896671 - 896660 - g 72 -3.6 -5.03314 | overlap 896661 GGTATTGCGAAAAAA GCCG TACC CAGC ATTATGCTAAGTCAG PMI0810 896294 - 896794 + | hypothetical protein TERM 1139 896843 - 896877 + F 71 -6.6 -4.15044 | opp_overlap 896845 896850, overlap 896845 896850 TATCTGCTTCAAAAC TATAAAACCTTCCT ACTAACA GGGAAGGTTTTGTG TTTATTGAAAGGCAA TERM 1140 896850 - 896870 + F 72 -4.7 -4.89838 | opp_overlap 896850 896845, overlap 896845 896843 TTCAAAACTATAAAA CCTTCCT ACTAACA GGGAAGG TTTTGTGTTTATTGA TERM 1141 896927 - 896905 - f 100 -10.6 -6.4275 | CAAAAATAAAAAAAA GACCAACGCT AGG AGAGTTGGTC AATAAATACTAGAAG TERM 1142 897647 - 897633 - f 87 -4.4 -5.85425 | opp_overlap 897626, overlap 897626 CAAAGAAATAAAAAA TTTATT TTT AATAAA TCTAAGAGGAACCCA PMI0811 897693 - 897869 + | hypothetical protein TERM 1143 897917 - 897946 + T 72 -8.7 -3.12446 | opp_overlap 897917, overlap 897929 897941 TCGAAGTATTTATAA GATGGGTAGTCTT ATAT AAGGTTATCCATC TTGGATGAATTTATA TERM 1144 897929 - 897963 + T 74 -7.4 -4.14392 | opp_overlap 897917, overlap 897917 897941 TAAGATGGGTAGTCT TATATAAGGTTATCCA TCT TGGATGAATTTATATA TTTATCTGTGGATAT TERM 1145 898002 - 898025 + T 86 -9.7 -4.06825 | opp_overlap 898002, overlap 897992 TATAATAATTTAAAA GGTATAGTC CGTTTA GACTATACC TTTAGTGTTATTTTA TERM 1146 898025 - 898002 - T 95 -10.4 -4.37734 | opp_overlap 897992 898002 TATAATAATTTAAAA GGTATAGTCC GTTT AGACTATACC TTTAGTGTTATTTTA PMI0812 898784 - 898038 - | hypothetical protein PMI0813 899034 - 898786 - | hypothetical protein TERM 1147 899344 - 899334 - H 70 -8.2 -3.17257 | overlap 899332 AAAAGATAGTGAACA GGGG GAA CCCC GAACCTTGGCCGACG PMI0814 899635 - 900213 + | hypothetical protein TERM 1148 900301 - 900275 - T 93 -8.1 -5.28281 | opp_overlap 900273 900275 ATAAAAGAAAGAAAA GTCGCCTTT ACCTTTATA AAAGGCGAC TGTTTACTCAGCGTG TERM 1149 900275 - 900301 + T 73 -8.1 -3.45324 | opp_overlap 900275, overlap 900273 ATAAAAGAAAGAAAA GTCGCCTTT ACCTTTATA AAAGGCGAC TGTTTACTCAGCGTG TERM 1150 900924 - 900935 + T 77 -3 -5.61596 | overlap 900930 TTGGAGTTTGAATTT TAAG ATCT CTTA TTTTTTTGTAAGAGT TERM 1151 901345 - 901314 - T 87 -10.4 -3.737 | opp_overlap 901318, overlap 901318 TAACTTGCCATCAAA GAAAGTATCTATTA GCTT TAATAGATGCTTTC TAAAATAAAAAATTA TERM 1152 901318 - 901341 + T 74 -7.6 -3.89346 | opp_overlap 901314 901318 TTGCCATCAAAGAAA GTATCTATTA GCTT TAATAGATGC TTTCTAAAATAAAAA TERM 1153 901495 - 901516 + T 84 -10.1 -3.45032 | opp_overlap 901489 901493 901484 901496, overlap 901487 901496 AAGATGATAGAGATT ACCTCGCCT ATAC AGGCGAGGC TTATAACTATTATTA TERM 1154 901515 - 901496 - T 100 -13.6 -2.74038 | opp_overlap 901496 901495 901487, overlap 901489 901493 901484 AGATGATAGAGATTA CCTCGCCT ATAC AGGCGAGG CTTATAACTATTATT TERM 1155 901496 - 901515 + T 100 -13.6 -2.66296 | opp_overlap 901489 901493 901484 901496, overlap 901495 901487 AGATGATAGAGATTA CCTCGCCT ATAC AGGCGAGG CTTATAACTATTATT PMI0817 901942 - 901529 - | phage protein PMI0818 902174 - 901989 - | hypothetical protein TERM 1156 902200 - 902256 + r 74 -5.4 -4.87592 | gap 1, overlap 902255 TTCCGTCAACTGATA TACACACTATACACACTAAGACGTAGG CAAT CAAATATTTT-GTGTGTATGGTGTGTA TTTTATTATCTATAA TERM 1157 903584 - 903604 + r 75 -8.3 -3.66028 | opp_overlap 903584 AAAATTTTTATCATA CGGACAC CGATAGA GTGTCCG TTATTGAGAATTATA TERM 1158 903604 - 903584 - R 73 -9 -2.80575 | opp_overlap 903584 AAAATTTTTATCATA CGGACACC GATAG AGTGTCCG TTATTGAGAATTATA PMI0822 904543 - 904229 - | hypothetical protein TERM 1159 904272 - 904286 + g 76 -3.6 -5.28683 | opp_overlap 904272 AAATTACTCAAACTA CATAAG TTT TTTATG TTTTTTGATGTTAGT TERM 1160 904748 - 904715 - R 88 -12 -2.9348 | opp_overlap 904718 904723, overlap 904723 GGCAAATTCCAGACA TAAAAAAACCAACC GTAAGT GGTTGGTTTTCTTA AATAAAAATGGTCGG TERM 1161 904723 - 904740 + r 82 -7.7 -4.67982 | opp_overlap 904715 904723, overlap 904718 CCAGACATAAAAAAA CCAACCG TAAG TGGTTGG TTTTCTTAAATAAAA TERM 1162 904740 - 904723 - R 100 -7 -5.76633 | opp_overlap 904723 904718, overlap 904715 CCAGACATAAAAAAA CCAACC GTAAGT GGTTGG TTTTCTTAAATAAAA PMI0823 906693 - 904960 - | sulphatase TERM 1163 905525 - 905538 + g 72 -3.1 -5.04249 | TGTAAGAAAGAGAAC CAAGG TGTG CTTTG TTTATTTTTTAACAA PMI0824 906944 - 906717 - | hypothetical protein ndpA 907108 - 908112 + | nucleoid-asociated protein TERM 1164 908153 - 908131 - T 100 -12.1 -4.66625 | opp_overlap 908134 ATAGATAGAAACAAA TAACGCCAC ATTAA GTGGCGTTA CATGCTCGGCGTCCC TERM 1165 908134 - 908150 + T 76 -9.4 -3.09635 | opp_overlap 908131 GATAGAAACAAATAA CGCCAC ATTAA GTGGCG TTACATGCTCGGCGT rplY 908480 - 908196 - | 50S ribosomal protein L25 TERM 1166 908537 - 908512 - R 73 -8.3 -3.37871 | overlap 908508 AAAAGAAAATACATA CTTGTTACAGG CGAC CCAGCAACAAG CTCGAGATTTGGTTT PMI0827 910390 - 908621 - | helicase TERM 1167 910708 - 910685 - g 93 -9.6 -4.70879 | GTGAAATGGTAAAAA CAGGTGCGAC TAAA ATCACACCTG AACAAGAAGTTGCTT rsuA 910579 - 911283 + | ribosomal small subunit pseudouridine synthase A bcr 911319 - 912503 + | bicyclomycin resistance protein (sulfonamide resistance protein) (MFS-family transporter) TERM 1168 912538 - 912512 - f 88 -11.8 -2.92037 | opp_overlap 912512, overlap 912509 912507 TAAATAAGAATATCA CGCTATAAATAC ACT ATATTTATAGCG TTTTCCTTTCTATTT TERM 1169 912512 - 912538 + F 100 -11.1 -4.68919 | opp_overlap 912509 912507 912512 TAAATAAGAATATCA CGCTATAAATA CACTA TATTTATAGCG TTTTCCTTTCTATTT TERM 1170 913288 - 913298 + G 76 -6.8 -4.3255 | ACATAGTGATGATGA GTGC GCA GCAC TTTGTTGCTTAAAAA PMI0830 913019 - 913366 + | hypothetical protein TERM 1171 913494 - 913519 + T 100 -8.4 -5.46657 | gap 1, opp_overlap 913494 AAACAACATAAAAAA GCCCC-ATACT CAATA AGTATTGGGGC TTTTTTATTGCGATA TERM 1172 913519 - 913494 - T 100 -9.1 -5.57729 | gap 1, opp_overlap 913494 AAACAACATAAAAAA GCCCC-ATACTC AAT AAGTATTGGGGC TTTTTTATTGCGATA spr 914166 - 913552 - | lipoprotein TERM 1173 914292 - 914277 - R 90 -9 -4.57569 | CTATTTCGCGAAAAA CGTGCT CTAA AGCACG TAAATATCCACATTA TERM 1174 914463 - 914484 + r 100 -10.9 -5.13016 | opp_overlap 914463 TTACAGATAAAAAAA TAAGCGCTC AGTA GGGCGCTTA TTTTTACTTTTACTT TERM 1175 914484 - 914463 - R 100 -8.7 -5.76633 | opp_overlap 914463 TTACAGATAAAAAAA TAAGCGCTC AGTA GGGCGCTTA TTTTTACTTTTACTT PMI0832 915237 - 914515 - | membrane-associated phosphatase TERM 1176 915120 - 915109 - G 81 -3 -5.57888 | opp_overlap 915109 ATTAAAAAAATAAAA GATA TGTG TATC TATTGAAAGCCAAAA PMI0833 915584 - 915895 + | hypothetical protein TERM 1177 916071 - 916083 + F 72 -4.9 -4.76075 | opp_overlap 916054, overlap 916054 TTCTTATTGTGTCTA TATGA ATG TCATA TTTTATTGCTATGAT PMI0834 916160 - 916486 + | hypothetical protein PMI0835 917193 - 916621 - | elongation factor P-like protein TERM 1178 917322 - 917293 - R 87 -10.1 -3.78934 | gap 1, overlap 917294 TTTTTGGCAGAAGAA GGTTCAAGCCAGCA TAT TGCTGGCTTGA-CG GAAGATCAGCGGTAA TERM 1179 917321 - 917294 - R 100 -13.6 -2.87146 | gap 1, overlap 917293 TTTTGGCAGAAGAAG GTTCAAGCCAGCA TAT TGCTGGCTTGA-C GGAAGATCAGCGGTA mtr 918569 - 917328 - | tryptophan-specific transport protein TERM 1180 918851 - 918819 - R 100 -13.8 -4.64598 | TAAGTAGGGGAAAAA CATTATTCTGAATA AAGAA TATTCAGAATAATG ATGAAGAGTGTTAAT PMI0837 919282 - 918866 - | MutT/NUDIX family protein nfo 920212 - 919367 - | endonuclease IV TERM 1181 919947 - 919966 + g 79 -8.6 -4.03888 | opp_overlap 919946, overlap 919963 TCATCGAGAAAAGCG GCTCTTGA TTTT TCAAGGGC TTCTTCTTCTGGATG TERM 1182 920323 - 920296 - R 100 -10 -5.5762 | AGGAAATATAAAAAA GCGCAACTTA AACTAGAA TAAGTTGCGC AATACGGAGGTACAT PMI0839 921445 - 920360 - | hypothetical protein rscR 921630 - 922520 + | LysR-family transciptional regulator TERM 1183 922677 - 922689 + G 76 -9.1 -3.65199 | opp_overlap 922663 922661 922666 ATACCGCAAAATCGG GTGCG GTA CGCAC TTTGCGTCGAGAATT TERM 1184 922719 - 922733 + G 70 -8.6 -3.28984 | TAAAGGCGCGACATT TAGCGA TGA TCGCTA TTGGTGGTTCAATTG TERM 1185 923240 - 923250 + G 80 -8.2 -4.33708 | opp_overlap 923239 CACAACTGGGAAATC GGCG ATG CGCC TTTTGCTGGTGGTTT lysP 922643 - 924130 + | lysine-specific permease TERM 1186 924197 - 924148 - T 100 -15.2 -3.78953 | opp_overlap 924152, overlap 924150 924152 AGTTTTATCACTAAA TAGAGAGCCGGCTAATTTGTGA ACTTTA TCACAATTTAGCCGGCTCTTTT TCTATTCTATGACTA TERM 1187 924195 - 924150 - T 100 -17.8 -3.48024 | opp_overlap 924152, overlap 924148 924152 TTTTATCACTAAATA GAGAGCCGGCTAATTTGTGA ACTTTA TCACAATTTAGCCGGCTCTT TTTCTATTCTATGAC TERM 1188 924193 - 924152 - T 100 -20.4 -3.31162 | opp_overlap 924152, overlap 924150 924148 TTATCACTAAATAGA GAGCCGGCTAATTTGTGA ACTTTA TCACAATTTAGCCGGCTC TTTTTCTATTCTATG TERM 1189 924152 - 924193 + T 100 -20.4 -5.1764 | opp_overlap 924152 924150 924148 TTATCACTAAATAGA GAGCCGGCTAATTTGTGA ACTTTA TCACAATTTAGCCGGCTC TTTTTCTATTCTATG PMI0841A 924376 - 924176 - | hypothetical protein TERM 1190 924819 - 924837 + H 78 -9 -3.53444 | opp_overlap 924818 924815 924814 924819, overlap 924815 ATCAAAATAACTAAG GGTAATTA AAT TAATTACC TTCATTGTTGAGCAA TERM 1191 924837 - 924819 - H 73 -9 -2.81158 | opp_overlap 924819 924815, overlap 924818 924815 924814 ATCAAAATAACTAAG GGTAATTA AAT TAATTACC TTCATTGTTGAGCAA TERM 1192 924959 - 924969 + G 70 -5.4 -4.46212 | overlap 924951 GGCGTTGTTGCTGCT CTTG CAT CAAG TTTTGTGATGACAGC TERM 1193 925694 - 925661 - g 70 -2.5 -5.15969 | gap 1, opp_overlap 925670 925673, overlap 925663 925667 TTTGAATTTAAAAAA GATAATCAACATCGTG ATT CACG-TGTTGGCTATT CAAAATCAGCTGAAC PMI0842 924911 - 926893 + | TonB-dependent receptor TERM 1194 926921 - 926939 + F 100 -13.2 -6.01369 | opp_overlap 926921 GTGTGTGTCAATCAA GCTCCACA TTA TGTGGAGC TTTTTTTGTTATTTA TERM 1195 926939 - 926921 - f 100 -13.2 -3.33696 | opp_overlap 926921 GTGTGTGTCAATCAA GCTCCACA TTA TGTGGAGC TTTTTTTGTTATTTA TERM 1196 927496 - 927518 + F 95 -4.9 -6.31682 | gap 1, opp_overlap 927496 CCACTAAAAATATGA CTGATGC-GT TTTA ACTGCATCGG TTTTTTTTTGCTTTT PMI0842A 927645 - 927854 + | hypothetical protein PMI0843 927844 - 929223 + | amino acid permease TERM 1197 929274 - 929255 - T 100 -12.2 -4.68593 | opp_overlap 929255 TTGATTATTTAAAAA TGGCCTCA TTAG TGAGGCCA TTTTTTGTTTATAGT TERM 1198 929255 - 929274 + T 100 -12.2 -5.73978 | opp_overlap 929255 TTGATTATTTAAAAA TGGCCTCA TTAG TGAGGCCA TTTTTTGTTTATAGT PMI0844 932222 - 929289 - | autotransporter TERM 1199 930400 - 930414 + g 70 -3.6 -4.91109 | TTATTTCTTCCGACA TTTAGT ATT ACTGAA TTTTTATCGTAGGAC ipdC 934189 - 932540 - | indole-3-pyruvate decarboxylase TERM 1200 934139 - 934129 - G 71 -4 -4.89233 | CAGCAACACCAAAAA TATC TTT GATA CCTAAATCATATAAT PMI0846 934339 - 935232 + | LysR-family transcriptional regulator TERM 1201 935250 - 935265 + F 82 -7.6 -4.73613 | opp_overlap 935250 935248 ATGGAATGATAAATA CGCTTT GTAA AAAGCG TTTTATTAATGGTAG TERM 1202 935265 - 935250 - f 73 -7.6 -3.62572 | opp_overlap 935250, overlap 935248 ATGGAATGATAAATA CGCTTT GTAA AAAGCG TTTTATTAATGGTAG dld 935450 - 937219 + | D-lactate dehydrogenase TERM 1203 937234 - 937210 - T 79 -6.6 -4.64591 | overlap 937214 TAATCATATAGAAAA CAAAGAATAA GTTTT TTATTCTCTG ACAGCTAAATATAAT TERM 1204 937253 - 937268 + T 95 -10.4 -4.26079 | opp_overlap 937253 GCTAAATATAATAAA GGCAGG GAAA CCTGCC TTTTGCGTAATTTAA TERM 1205 937268 - 937253 - T 95 -10.4 -4.52143 | opp_overlap 937253 GCTAAATATAATAAA GGCAGG GAAA CCTGCC TTTTGCGTAATTTAA sbcB 938731 - 937301 - | exodeoxyribonuclease I PMI0850 939151 - 940413 + | MFS-family transporter TERM 1206 940459 - 940480 + F 100 -9.5 -5.68039 | TAGATAATTTTTATG GCTACCATT CGTG AGTGGTAGC TTTTTTTATCGATTT PMI0851 940674 - 941012 + | hypothetical protein TERM 1207 941061 - 941036 - T 100 -13.4 -3.84451 | opp_overlap 941036 GCTGGCAAATCCAAA GGCCTCTGAA TGGTTG TTCAGAGGCC TTTTTTTTCGTTTTT TERM 1208 941036 - 941061 + T 100 -14.1 -6.11019 | opp_overlap 941036 GCTGGCAAATCCAAA GGCCTCTGAAT GGTT GTTCAGAGGCC TTTTTTTTCGTTTTT TERM 1209 941135 - 941114 - T 100 -10.9 -5.19275 | opp_overlap 941114 AGCCATAAAACAAAA GAGCCTGCT AATT AACAGGCTC TTGGATTAACAACGG TERM 1210 941114 - 941135 + T 72 -8.7 -3.17075 | opp_overlap 941114 AGCCATAAAACAAAA GAGCCTGCT AATT AACAGGCTC TTGGATTAACAACGG rne 944707 - 941186 - | ribonuclease E TERM 1211 941797 - 941810 + g 72 -4.5 -4.79352 | opp_overlap 941785 941794 941797 TAACGTCAGCAATAA CGTTG TTAA CAGCG TTTTCTTCTACATGA TERM 1212 943391 - 943403 + g 70 -2.7 -5.14626 | overlap 943372 GGGCACAATAGCGTG TACTT CAT GAGTA TTTTCTTTTAATGCT TERM 1213 943980 - 943992 + g 70 -7.7 -3.65353 | opp_overlap 943980 CCAATGGCTTCAATA TGGCT ACG AGCCA TTTCAACTACTTTAG TERM 1214 944105 - 944119 + g 79 -4.9 -5.15634 | overlap 944105 CAGAAAAGGAGCAGG GCGGC TTTCC GCTGC TTTTTTGATAGCATC TERM 1215 944663 - 944640 - G 73 -7.4 -4.11404 | overlap 944641 TCCAGATCATACAAA CGTTGCCCAT CAAC AAGGGCAACA CGCAACTCTTCCTGT TERM 1216 945570 - 945556 - g 70 -7.8 -3.72324 | GATGCTGATTAATAA GCCATC AGG GACGGC AGTACATGGTGGTAG rluC 945239 - 946192 + | ribosomal large subunit pseudouridine synthase C TERM 1217 946246 - 946209 - T 76 -8.5 -3.5393 | opp_overlap 946213 946217 946239, overlap 946212 946217 ACTACTGTTTTCAAA CTAGCAAAGTGGGAGAA AATT TTTTCCCACTTTGTTTG CAAATGATTTACCGT TERM 1218 946243 - 946212 - T 71 -8.8 -2.90615 | opp_overlap 946213 946217 946239, overlap 946209 946217 ACTGTTTTCAAACTA GCAAAGTGGGAGAA AATT TTTTCCCACTTTGT TTGCAAATGATTTAC TERM 1219 946213 - 946242 + T 100 -14.5 -3.6003 | opp_overlap 946212 946209 946217, overlap 946217 946239 CTGTTTTCAAACTAG CAAAGTGGGAGAA AATT TTTTCCCACTTTG TTTGCAAATGATTTA TERM 1220 946238 - 946217 - T 72 -7.3 -3.8901 | opp_overlap 946213 946217, overlap 946212 946209 TTTCAAACTAGCAAA GTGGGAGAA AATT TTTTCCCAC TTTGTTTGCAAATGA TERM 1221 946217 - 946238 + T 91 -9.5 -4.42806 | opp_overlap 946217 946212 946209, overlap 946213 TTTCAAACTAGCAAA GTGGGAGAA AATT TTTTCCCAC TTTGTTTGCAAATGA PMI0854 946697 - 946299 - | lipoprotein TERM 1222 946537 - 946556 + g 83 -6.5 -5.05782 | opp_overlap 946536 946537 AAGTTCTTTTTAAAT GAAGATG CACTTT CATCTTC TTTTTTGGGATCAGT PMI0855 947341 - 946742 - | Maf-like protein TERM 1223 947091 - 947109 + g 87 -3.1 -5.8187 | opp_overlap 947090 947091 AAAGCGTTTTCAAAG TTAAGGG GCTTA CCCGTAA TTTTTTTATTGAGTA PMI0856 947483 - 948016 + | hypothetical protein rpmF 948022 - 948192 + | 50S ribosomal protein L32 TERM 1224 948467 - 948439 - g 70 -8.2 -3.63895 | GCCAATGATGCCAAA CCTTCACATGCT ATTAG AGCAAGTAAAGG CACATCAATGCGCGT TERM 1225 949058 - 949045 - g 74 -4.5 -4.86033 | opp_overlap 949045 AAATGGTTACAAAAA CGCCT AAAT AAGCG TTTTGGCCATATGAA TERM 1226 949140 - 949130 - g 73 -6.8 -4.26076 | GTATCGTCATTAAAA GCCA TGG TGGC GCAAATGAAAACGCG plsX 948217 - 949254 + | fatty acid/phospholipid synthesis protein fabH 949259 - 950212 + | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 1227 950485 - 950475 - g 79 -6.8 -4.63592 | overlap 950482 TGGCAAGAAAAACAA GGCA AAA TGCC ACAAATGATGGCAGG TERM 1228 950916 - 950898 - g 73 -8.2 -3.79481 | opp_overlap 950887 950898, overlap 950887 950901 GAAATTGAATTTAAA CAACCTGA AAT TCAAGTTG TTAATAATGTTGATG fabD 950232 - 951164 + | malonyl CoA-acyl carrier protein transacylase fabG 951173 - 951907 + | 3-oxoacyl-[acyl-carrier protein] reductase acpP 952065 - 952301 + | acyl carrier protein TERM 1229 952311 - 952336 + F 95 -11.9 -3.75024 | opp_overlap 952302 952299 952315, overlap 952313 AAATAAGCTTGCTAA TCTAGGCGGTC ACTC GACCGCCTATA TTCTTAATCCTAAAC TERM 1230 952313 - 952334 + F 100 -14.5 -3.45742 | opp_overlap 952302 952299 952315, overlap 952311 ATAAGCTTGCTAATC TAGGCGGTC ACTC GACCGCCTA TATTCTTAATCCTAA TERM 1231 952332 - 952315 - f 95 -12.7 -2.52795 | opp_overlap 952313 952311, overlap 952302 952299 AAGCTTGCTAATCTA GGCGGTC ACTC GACCGCC TATATTCTTAATCCT TERM 1232 952958 - 952983 + G 71 -6.1 -4.26903 | opp_overlap 952958 952962, overlap 952959 GGCGGTGCTGAAAAA GCAACAACACC ATTA GGTGTTGGTGG TTTTGGTGCAGTACG TERM 1233 952983 - 952958 - g 77 -6.1 -4.56597 | opp_overlap 952958 952959, overlap 952962 GGCGGTGCTGAAAAA GCAACAACACC ATTA GGTGTTGGTGG TTTTGGTGCAGTACG TERM 1234 952959 - 952982 + G 73 -9.6 -3.1582 | opp_overlap 952958 952962, overlap 952958 GCGGTGCTGAAAAAG CAACAACACC ATTA GGTGTTGGTG GTTTTGGTGCAGTAC TERM 1235 952979 - 952962 - g 83 -9.9 -3.80855 | opp_overlap 952959 952958, overlap 952958 GTGCTGAAAAAGCAA CAACACC ATTA GGTGTTG GTGGTTTTGGTGCAG fabF 952376 - 953617 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1236 953670 - 953649 - f 70 -7.3 -3.63895 | opp_overlap 953649 TTGAATTAGTCTAAA GACCCAG ACGTCATG CTGGGTC TTTTATTTTATCTAT TERM 1237 953649 - 953670 + F 91 -7.3 -5.24647 | gap 1, opp_overlap 953649 TTGAATTAGTCTAAA GACCCAGACG TCA TG-CTGGGTC TTTTATTTTATCTAT pabC 953762 - 954589 + | aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) TERM 1238 954795 - 954818 + G 76 -7.6 -4.30559 | opp_overlap 954795 954798, overlap 954785 954783 954787 ATTGCTTATTAAGAA TAATCTTCTT AAAC AAGGAGATTA TTTTCAAATTTTATT PMI0865 954607 - 955629 + | aminodeoxychorismate lyase tmk 955632 - 956276 + | thymidylate kinase holB 956273 - 957259 + | DNA polymerase III, delta' subunit TERM 1239 957251 - 957265 + F 87 -8.6 -4.32857 | CAGCTAGTTGCTCTA GGGAAA TAA TTTCCC TTTCTATTTAGCAGA PMI0868 957327 - 958112 + | deoxyribonuclease PMI0869 958177 - 958527 + | nucleotide-binding protein PMI0870 958569 - 958970 + | lipoprotein PMI0871 958985 - 959566 + | lipoprotein TERM 1240 959590 - 959621 + G 77 -10.2 -3.31144 | opp_overlap 959582 AACAACAGTTATTGA GCCTATTGCGGGAA TGGT TTCCCGCAATACCC TTATCACAGTGGCAA TERM 1241 959652 - 959641 - g 71 -7.2 -3.93256 | CACAGTGGCAAATAA CCGC CTTA GCGG GATTAGGGGGCGGCA TERM 1242 959813 - 959825 + G 100 -7.7 -5.78622 | opp_overlap 959812 AAATATTATTAAACG CCATG GTG CATGG TTTTTTTTCCAGTGG PMI0872 959559 - 960470 + | kinase nagZ 960509 - 961528 + | beta-hexosaminidase TERM 1243 961710 - 961699 - g 73 -5.8 -4.51799 | opp_overlap 961698 961694 961691, overlap 961694 961691 ATTAAATCGACAAAA CAGC CGGT GCTG ATTTGTGGTGTTGGA PMI0874 961525 - 962070 + | hypothetical protein TERM 1244 962086 - 962111 + F 100 -9.1 -5.75822 | opp_overlap 962086 962088 AATTGGCTTATGTAA GATGGACAGAG TGCA TTTTGTCCATC TTTTTTTGATTTATA ndh 962466 - 963773 + | NADH dehydrogenase TERM 1245 963797 - 963822 + F 80 -7.1 -4.64861 | gap 1 GGTTTATTTTTCTAA CTTTTGTTT-CT TTT AGCAAACAAAAG TTTATTTTAACCCCC TERM 1246 963834 - 963860 + F 93 -9.5 -4.64844 | gap 1 AAAGTTTATTTTAAC CCCCCG-CAGTA TTTA TATTGTCGGGGG TTTTATCTATCTAAA umoD 964662 - 965162 + | exported protein (upregulator of flagellar master operon) TERM 1247 965150 - 965165 + T 71 -3.2 -5.27023 | TGAAAATATTCCTTG CCGTAA AGAG TAACGG TTTTCTTTTTAGCAT TERM 1248 965233 - 965209 - T 100 -7.2 -5.5208 | opp_overlap 965209 TGATAAGATAAAAAA GGCCTAATAT TTATT ATGTTAGGCC TTTTTGCATTTTATT TERM 1249 965209 - 965233 + T 100 -9.4 -4.91084 | opp_overlap 965209 TGATAAGATAAAAAA GGCCTAATAT TTATT ATGTTAGGCC TTTTTGCATTTTATT mfd 968706 - 965251 - | transcription-repair coupling factor TERM 1250 965414 - 965431 + g 79 -3.5 -5.40072 | gap 1, opp_overlap 965405 965417, overlap 965417 AATAAACCGATTAAA TAA-GTCG GGT CGACATTA TTTTTTTCACCAAAC TERM 1251 965427 - 965417 - G 71 -6.8 -4.03174 | opp_overlap 965417 965414, overlap 965405 AAACCGATTAAATAA GTCG GGT CGAC ATTATTTTTTTCACC TERM 1252 968627 - 968670 + g 73 -7.4 -4.08692 | gap 1, overlap 968655 GCACATTCTAGGGCG CAAGCGG-CACCTGTCAGCTG ACC CAGCTGGCGAGTATCCCCTTG TTTTACAGGAAGTTG TERM 1253 969728 - 969740 + G 71 -6.9 -4.01737 | overlap 969729 ATTAAGCCTAATTAT TGCGG TCG CCGCG TTTAATATTATTACT lolC 968901 - 970103 + | lipoprotein releasing system, transmembrane protein lolD 970096 - 970800 + | lipoprotein releasing system, ATP-binding protein TERM 1254 971570 - 971560 - g 73 -6.8 -4.13945 | opp_overlap 971559 971555 ATGTTTATGCTAAAA GCTG GAT CAGC GATTATGGTTATATG lolE 970800 - 972047 + | lipoprotein-releasing system transmembrane protein npdA 972138 - 972995 + | NAD-dependent deacetylase pepT 973047 - 974291 + | peptidase T TERM 1255 974321 - 974345 + T 100 -11.6 -4.88684 | opp_overlap 974324 AAAATAATTGCCCCA TAATAGCCGA CAATC TCGGCTATTA TTTTATCTTTGTCTT TERM 1256 974342 - 974324 - T 77 -8.9 -3.30338 | opp_overlap 974321 ATAATTGCCCCATAA TAGCCGA CAATC TCGGCTA TTATTTTATCTTTGT TERM 1257 974846 - 974817 - T 88 -9.3 -4.28375 | opp_overlap 974818 974820, overlap 974810 974820 TTAACATAGTTAAAA TAACACCCAGCTA TAAT TAGCTGGGTGTGT TTGTATAAAAATAGT TERM 1258 974818 - 974845 + T 100 -12.8 -4.04206 | opp_overlap 974810 974817 974820, overlap 974820 TAACATAGTTAAAAT AACACCCAGCTA TAAT TAGCTGGGTGTG TTTGTATAAAAATAG TERM 1259 974820 - 974843 + T 100 -15.4 -3.615 | opp_overlap 974820 974817, overlap 974818 ACATAGTTAAAATAA CACCCAGCTA TAAT TAGCTGGGTG TGTTTGTATAAAAAT TERM 1260 974843 - 974820 - T 100 -15.4 -4.24602 | opp_overlap 974818 974820, overlap 974817 ACATAGTTAAAATAA CACCCAGCTA TAAT TAGCTGGGTG TGTTTGTATAAAAAT PMI0883 975993 - 974872 - | hypothetical protein phoQ 977651 - 976188 - | two-component sensor kinase TERM 1261 977308 - 977332 + g 72 -9.3 -3.38224 | overlap 977306 977309 977311 TCAAATAAGCCTTCT TTATTGCGCCA TTT TGGCGCGATAC TGTTTGGGATCACCT TERM 1262 977309 - 977331 + g 83 -12.8 -2.62613 | overlap 977308 977306 977311 CAAATAAGCCTTCTT TATTGCGCCA TTT TGGCGCGATA CTGTTTGGGATCACC TERM 1263 977311 - 977329 + g 77 -11 -2.85297 | overlap 977309 977308 977306 AATAAGCCTTCTTTA TTGCGCCA TTT TGGCGCGA TACTGTTTGGGATCA phoP 978327 - 977653 - | two-component response regulator TERM 1264 978483 - 978499 + r 83 -8 -4.23758 | opp_overlap 978483 ATCGATATAAAAAAA GGCAGA GATTA TCTGCC TTTTAAGTATGGGAT TERM 1265 978499 - 978483 - R 100 -8 -5.72616 | opp_overlap 978483 ATCGATATAAAAAAA GGCAGA GATTA TCTGCC TTTTAAGTATGGGAT purB 979888 - 978518 - | adenylosuccinate lyase PMI0887 980550 - 979921 - | hypothetical protein TERM 1266 980299 - 980310 + g 80 -4.4 -5.2015 | opp_overlap 980299 TTGATAAGTCATCAA CTCA AACG TGAG TTTTTCTCTTCTTAC TERM 1267 980523 - 980495 - G 91 -14 -2.85545 | gap 1, opp_overlap 980493, overlap 980492 980490 TGCTGAACAAGACGA CTTGC-CTGGCAG ATAC CTGCCAGTGCAAG GGTAATATCACGAAA trmU 981656 - 980553 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1268 981052 - 981031 - G 70 -5.9 -4.31433 | TAGCGCGATAAGAAA TCAGTAAAC TTGC GTTCACCGA TAAAACAGATCCCCG TERM 1269 981734 - 981773 + r 100 -13.2 -3.01791 | gap 1, opp_overlap 981732 981729 981727 CAAACGAATACATTT TTTGCCTTCTTAACTATGA AAG TCATTGTTAAG-AGGCAAA TGTTGAACCAAAGCT PMI0889 982214 - 981762 - | Nudix hydrolase TERM 1270 981985 - 981973 - G 90 -3.3 -5.95286 | opp_overlap 981973 ATCAAAAATAAAAAA CGCAA AAA TGGCG TATTGTCCGGTGCCA rluE 982836 - 982207 - | ribosomal large subunit pseudouridine synthase E icd 982975 - 984228 + | isocitrate dehydrogenase [NADP] TERM 1271 984248 - 984275 + T 100 -9.2 -5.34555 | opp_overlap 984247 984252, overlap 984252 TGATTTGATAAATAG TTAACGGGAGCT TATT AGTTCCCGTTTA TTTTTTGTACTATAA TERM 1272 984252 - 984271 + T 100 -10 -5.1471 | opp_overlap 984252 984247, overlap 984248 TTGATAAATAGTTAA CGGGAGCT TATT AGTTCCCG TTTATTTTTTGTACT intE 985471 - 984338 - | integrase xis 985697 - 985446 - | excisionase PMI0894 986234 - 985758 - | DNA N-4 cytosine methyltransferase PMI0895 986469 - 986218 - | phage protein PMI0896 987002 - 986469 - | phage protein PMI0897 987191 - 987012 - | phage protein PMI0898 987440 - 987219 - | phage protein PMI0899 987950 - 987453 - | single-strand binding protein TERM 1273 987997 - 987977 - R 74 -9 -3.14602 | opp_overlap 987977, overlap 987975 CCTATTTGAGTAATA TCGCCACC AATAA GATGGCGA TTAATTAATAATTAA PMI0900 988836 - 988009 - | prophage protein PMI0901 989276 - 988902 - | prophage protein TERM 1274 989074 - 989090 + g 70 -3 -5.13741 | overlap 989075 GAGAACTTAAGTTTA TGAGTT ATTTC AACTCG TTTTTCTTCCATTGA PMI0902 989482 - 989300 - | hypothetical protein TERM 1275 989711 - 989731 + r 74 -6.9 -4.27062 | opp_overlap 989698 989711 AACTTACTGGAAGTA TGATTACTG GTT CAGTTATCA TTTACTTTTCCTTCA TERM 1276 989795 - 989781 - R 72 -8.6 -3.05997 | opp_overlap 989779 989781 TTGTTATAAATGATA TTAGGC TAA GCCTAA TCTTTAGTCAATAGG TERM 1277 989781 - 989795 + r 76 -8.6 -3.46647 | opp_overlap 989781, overlap 989779 TTGTTATAAATGATA TTAGGC TAA GCCTAA TCTTTAGTCAATAGG racR 990407 - 989925 - | prophage repressor TERM 1278 990474 - 990460 - H 72 -8.6 -3.09878 | opp_overlap 990459 990455 CCTATTGATTTAACA TTAGGC TTA GCCTAA CATTGTATTTCAATA PMI0904 990511 - 990750 + | phage protein PMI0905 990835 - 991497 + | phage protein TERM 1279 991926 - 991941 + G 71 -6.2 -4.13872 | opp_overlap 991915, overlap 991915 AATAGCAAGTGGTCG TGCATT TGTT AATGCA TTTATCTCATTACAT PMI0906 991513 - 991971 + | phage protein PMI0907 992057 - 992230 + | phage protein PMI0908 992227 - 992406 + | phage protein PMI0909 992419 - 993510 + | phage replication protein PMI0910 993664 - 994386 + | phage antirepressor TERM 1280 995140 - 995163 + G 75 -10.3 -3.07816 | opp_overlap 995139 995153 TTAAACCTAAAATGT GCCGTTGGG AGAATA CCCAATGGC TTCAATGGGTAAAAA PMI0911 994386 - 995411 + | phage protein PMI0912 995439 - 995837 + | phage antitermination Protein TERM 1281 995859 - 995846 - f 71 -5.3 -4.5442 | opp_overlap 995846 TGTGTAATTACAAAA CACAA TATA TTGTG TTAATAATGATTTTG cspA 996178 - 996390 + | cold shock protein TERM 1282 996564 - 996579 + F 93 -8.2 -5.24989 | opp_overlap 996559 996564 GTTGAATATACAAAA CCTCGC TTCG GCGGGG TTTTTTGCTATCTAC TERM 1283 996579 - 996564 - f 74 -6 -4.67943 | opp_overlap 996564, overlap 996559 GTTGAATATACAAAA CCTCGC TTCG GCGGGG TTTTTTGCTATCTAC PMI0914 996935 - 999136 + | hypothetical protein TERM 1284 999218 - 999174 - g 72 -10 -2.56571 | gap 1, opp_overlap 999187, overlap 999170 CACACACTCAACGGA TCGGGAGCG-AGCGCATATGC TTAC GCACATGTTCTACGCGCCCGA AACGAAAACGAGTGT PMI0915 999136 - 999387 + | hypothetical protein TERM 1285 999649 - 999622 - T 100 -10 -6.01369 | gap 1 CAAACAATAAAAAAA TGCCGATACG-CT AGG AGTCATATCGGCA TATAAAATAAACGCA TERM 1286 999771 - 999785 + T 76 -6.4 -4.54727 | opp_overlap 999771 CCCTAAATTAAATAA GGTTAC TTT GTAGCC TTTTCATTTACACCG TERM 1287 999999 - 999978 - T 84 -10.2 -3.54488 | opp_overlap 999977 999976 999980, overlap 999963 999976 GTCTCTTAAATAATA GACCCCAA TTATTT TTGGGGTC ATATATTGAGATTAT PMI0916 1000384 - 1000049 - | carboxymuconolactone decarboxylase TERM 1288 1000258 - 1000269 + g 78 -3 -5.47821 | CTCTTGTTTTTGCAT CTAA ATGA TTAG TTTTTTTACCTGCAT TERM 1289 1000457 - 1000443 - H 100 -7.2 -5.86061 | overlap 1000445 TGGGATGAAAAAAAA GATGAT GAC ATCATC AAACGAATCAATTTT TERM 1290 1000458 - 1000445 - H 71 -5.3 -4.5787 | overlap 1000443 GGATGAAAAAAAAGA TGATG ACAT CATCA AACGAATCAATTTTT TERM 1291 1000809 - 1000797 - g 77 -6.3 -4.614 | GTTAAGTACACAAAA TCTGA AGA TCAGA CTCAACATGTTGATT PMI0917 1000488 - 1001414 + | transcriptional regulator TERM 1292 1001457 - 1001470 + F 100 -6.7 -5.60689 | overlap 1001452 TTACTTTCTTTTGAA GTCAC TTCG GTGAC TTTTTTGTTATCTAA TERM 1293 1001642 - 1001617 - f 100 -6.1 -5.86061 | gap 1 TTTGAGTAAAAAAAA GCCGACGCG-CT AGG AGTCATGTCGGC ATAAATCTTCGGGAA TERM 1294 1001785 - 1001770 - f 72 -9 -2.69964 | opp_overlap 1001770, overlap 1001767 TTGTCAATTATATGA GGTCAC TACA GTGACC TTTTTCTTGTCTAAA TERM 1295 1001770 - 1001785 + F 95 -9 -5.24796 | opp_overlap 1001770 1001767 TTGTCAATTATATGA GGTCAC TACA GTGACC TTTTTCTTGTCTAAA TERM 1296 1002165 - 1002148 - g 73 -8.5 -3.72784 | CTTACAACAAACGAA TACATGG ATAT CCATGTA CGGCCTTGTGATTGT PMI0918 1001831 - 1002253 + | phage protein TERM 1297 1002348 - 1002359 + G 86 -7.2 -5.04385 | opp_overlap 1002348 ACTTATGGAACAGCA GGCC TAAC GGCC TTTTTTGCCAGTCTC PMI0919 1002306 - 1002575 + | phage protein TERM 1298 1002604 - 1002594 - g 75 -5.4 -4.78848 | CTCTCAAACAGAAAA TAGC GGC GCTA ACAACAGCAGGAGCA PMI0920 1002575 - 1003045 + | phage lysozyme PMI0921 1003188 - 1003649 + | phage endopeptidase (lysis protein) TERM 1299 1003674 - 1003654 - f 100 -7.5 -5.4833 | GCATGGAATAAAAAA GCCCAGCAT GGG AGGCTGGAC AATACTAACAATATA TERM 1300 1003832 - 1003803 - f 71 -2.1 -5.48063 | overlap 1003805 ACGTAAGATAAAAAA TAGCCCTATGA TTTAATGT TCATAGGGCGG TTAAAATGAAGCAAA TERM 1301 1003830 - 1003805 - f 89 -9.1 -4.36863 | overlap 1003803 GTAAGATAAAAAATA GCCCTATGA TTTAATGT TCATAGGGC GGTTAAAATGAAGCA TERM 1302 1004236 - 1004219 - f 86 -4.2 -5.86061 | TTTGATGAAAAAAAA CTGTAA GAGAGA TTACAG GGCTGAAAAACATAA TERM 1303 1004487 - 1004509 + F 100 -9.9 -5.4505 | opp_overlap 1004487 TGGTGTATACAGATA GCCATCAGT TAACC ACTGGTGGC TTTTTTATTGCGGAA PMI0922 1004547 - 1004885 + | phage protein PMI0923 1005004 - 1005471 + | phage terminase, small subunit TERM 1304 1006232 - 1006255 + GF 74 -6 -4.46493 | opp_overlap 1006223 1006236, overlap 1006236 CGAAAAGTCGCCGAA GGAACTATCG AAGA CGACAGTTTC TTTTCCTATATTTGC PMI0924 1005425 - 1007158 + | phage terminase, large subunit TERM 1305 1008204 - 1008190 - g 71 -7 -4.07568 | CGTTGGCTTCTAAAA CCCCCC GAA GTGGGG AAATACCATGCTGAA PMI0925 1007158 - 1008426 + | phage portal protein TERM 1306 1008405 - 1008422 + F 80 -9.1 -3.65699 | opp_overlap 1008405 1008403 CCAACTCAATAAAGA GCCTCAC GAAA GTGGGGC TTAATTATTTATGGG PMI0926 1008444 - 1009112 + | head maturation protease TERM 1307 1009224 - 1009201 - g 81 -6.8 -4.76087 | opp_overlap 1009207 CACAGAAGAAAGAAA TTGAAGCTAC TGGC GTAGTTTCAA AGCAATTACAAACAG PMI0927 1009116 - 1010282 + | major capsid protein TERM 1308 1010292 - 1010311 + F 81 -10 -3.10975 | GCTTAAGTAATAGGT CGGGGTAG GTAA CTATCCCG TATTACATCATGAAT PMI0928 1010321 - 1010620 + | phage protein PMI0929 1010620 - 1010949 + | phage protein PMI0930 1010942 - 1011412 + | phage protein TERM 1309 1011466 - 1011440 - g 72 -8.7 -3.49321 | opp_overlap 1011440, overlap 1011424 1011438 1011436 AGCAATTAAAAGAGA CCCTTTCACCG CTGGT CGATGGAAGGG TTTTTTTTCAGGTAT TERM 1310 1011440 - 1011466 + G 100 -8.7 -5.79526 | opp_overlap 1011424 1011440 1011438 1011436 AGCAATTAAAAGAGA CCCTTTCACCG CTGGT CGATGGAAGGG TTTTTTTTCAGGTAT PMI0931 1011418 - 1011759 + | phage protein PMI0932 1011769 - 1012434 + | phage protein TERM 1311 1012900 - 1012888 - g 79 -3.3 -5.52909 | overlap 1012889 GAACAGCGAAAAAAA CTCGG AGA CCGAC GGCAATTCCAACTGA PMI0933 1012499 - 1012915 + | phage protein PMI0934 1012918 - 1013190 + | phage protein TERM 1312 1013209 - 1013188 - T 77 -10.1 -2.55544 | opp_overlap 1013190, overlap 1013184 GTATTAGCTAATCGA TAGCCCCAC ATCT GTGGGGCTT AATCGTTAACCACCG TERM 1313 1013190 - 1013207 + T 100 -12.7 -3.27298 | opp_overlap 1013188 1013184 ATTAGCTAATCGATA GCCCCAC ATCT GTGGGGC TTAATCGTTAACCAC PMI0935 1013406 - 1013215 - | phage membrane protein PMI0936 1013509 - 1016808 + | tail length tape measure protein PMI0937 1016809 - 1017405 + | phage protein PMI0938 1017405 - 1017986 + | phage protein TERM 1314 1018018 - 1018005 - f 73 -8.1 -3.53224 | opp_overlap 1018005 TATTGTCTTGTTAAA CCCAC TTTT GTGGG TTTTTTGCTATTTAA TERM 1315 1018005 - 1018018 + F 100 -8.1 -5.32699 | opp_overlap 1018005 TATTGTCTTGTTAAA CCCAC TTTT GTGGG TTTTTTGCTATTTAA TERM 1316 1018086 - 1018104 + G 93 -9.5 -4.7373 | opp_overlap 1018086, overlap 1018099 TACCTGAAACCATAA GGGCGGC GATGA GTCGCCC TTTTTCATGGGGTGA PMI0939 1018043 - 1018441 + | phage protein TERM 1317 1020509 - 1020496 - g 71 -6.7 -4.06185 | opp_overlap 1020495 GAGATAAATAGCAAA GCTGA CCAA TCAGC CGTTGTTGAGTTAAA PMI0940 1018441 - 1021470 + | phage tail protein TERM 1318 1021506 - 1021520 + G 72 -8.6 -3.56092 | TTTTCCTGTTGAAGG CGGTAA ACC TTACCG TTTAACGCGTGATAC TERM 1319 1021968 - 1021952 - g 80 -4.3 -5.24129 | overlap 1021953 TGTTTCGACAAAAAA TCCACCT TGA AGGCGGG CGCTATTGGTCTTTG TERM 1320 1021967 - 1021953 - g 70 -7.8 -3.73995 | overlap 1021952 GTTTCGACAAAAAAT CCACCT TGA AGGCGG GCGCTATTGGTCTTT PMI0941 1021474 - 1022475 + | phage protein PMI0943 1022674 - 1022922 + | colicin immunity protein TERM 1321 1022907 - 1022938 + F 85 -8.2 -4.58395 | overlap 1022908 TACTTATTTCATTGC ATTTGATTACCAGT GATA ACTGGTAATTAAAA TTTTTCAAGAATGAA TERM 1322 1022908 - 1022937 + F 89 -11.7 -3.34716 | overlap 1022907 ACTTATTTCATTGCA TTTGATTACCAGT GATA ACTGGTAATTAAA ATTTTTCAAGAATGA TERM 1323 1022965 - 1022994 + F 77 -7.9 -4.15222 | TGAAATAAAAACGAG TACCCGTTGCTTA CGAA TGAGTGGCGGGTA TTTATTCACAACAGT PMI0944 1022971 - 1023120 + | phage protein TERM 1324 1023230 - 1023248 + G 89 -8.9 -4.73677 | overlap 1023240 TTAATATATTACCTT CCCCATT CTTGA AATGGGG TTTCTTTATTATCAA PMI0945 1023136 - 1023420 + | hypothetical protein PMI0946 1023873 - 1023589 - | hypothetical protein TERM 1325 1024810 - 1024829 + H 100 -10 -5.56673 | opp_overlap 1024807 GTTGCGAATTGATTA CGGGAACT TAAG GGTTCCCG TTTTTTATTGTCAAT TERM 1326 1025181 - 1025196 + H 74 -9 -3.01208 | opp_overlap 1025177, overlap 1025180 ATCCAATATAACCTC GCCATC GATG GATGGC ATTATTATTGTGGGG PMI0949 1025468 - 1025860 + | hypothetical protein TERM 1327 1026036 - 1026072 + F 100 -12.1 -5.42131 | opp_overlap 1026035 1026040 TGGTTGATATAGTAC TTAATATTTATATTAAT TGT GTTAATATAAATATTAA TTTTTTATATGGTTG TERM 1328 1027184 - 1027211 + G 72 -10 -2.60797 | overlap 1027183 TAATTATTATGGTGA GGAGCAAAAATT ATTA AATTTTCGCTCC ATTGATATATCTAAA PMI0950 1026081 - 1027733 + | hypothetical protein PMI0951 1027739 - 1028602 + | hypothetical protein TERM 1329 1028659 - 1028683 + T 100 -10.9 -4.43877 | opp_overlap 1028659 1028662 TTATAAGTGAAGTAA GAAGGTTTATT TTT AGTAAACCTTC TTTATTTGGAAGTTA TERM 1330 1028683 - 1028659 - T 76 -8.7 -3.41978 | opp_overlap 1028659, overlap 1028662 TTATAAGTGAAGTAA GAAGGTTTATT TTT AGTAAACCTTC TTTATTTGGAAGTTA TERM 1331 1029065 - 1029084 + T 81 -4.2 -5.54885 | TTGATAAATAGTTAG CGGTAGCT TATT AGTTCCCG TTTTTTATTAATGTT int 1030465 - 1029338 - | phage integrase PMI0954 1030688 - 1030446 - | excisionase TERM 1332 1030927 - 1030900 - R 73 -9.3 -2.92246 | overlap 1030902 1030913 GTAATGGGAAGTACA TATTGAGCTGA AATGAG CCAGCTCAATA AACTAAAATAAAGAA PMI0955 1031592 - 1030945 - | phage repressor PMI0956 1031923 - 1032996 + | phage protein PMI0957 1033009 - 1033407 + | probable phage antitermination protein PMI0958 1033629 - 1033889 + | phage protein PMI0959 1034045 - 1034302 + | phage protein PMI0960 1034580 - 1034308 - | phage protein PMI0961 1034887 - 1035093 + | phage protein TERM 1333 1035345 - 1035367 + F 100 -7 -5.72254 | TAATGAAAGTTAAAG GCTAGGGACT AAT AGTTTCTGGC TTTTTTATTATTTAG PMI0962 1035396 - 1036418 + | phage DNA adenine-methylase TERM 1334 1036535 - 1036549 + F 77 -2.9 -5.55664 | ATTACTCTTTATTAT TATAG TTTTT CTATA TTTTTTTAATAATGA PMI0963 1036693 - 1037682 + | phage protein TERM 1335 1038088 - 1038111 + G 74 -4.6 -4.95806 | overlap 1038080 1038076 1038109 ATCGGATTATCCCAG TAGATATGGG ATAT CCTTTATCTA TTTTTATAGTCGTTT PMI0964 1037697 - 1038299 + | phage protein TERM 1336 1038357 - 1038368 + F 80 -5.8 -4.98522 | opp_overlap 1038355 1038351 1038357 GCTGTAAATTAAAGA CCAC TTCG GTGG TTTTTATGTCAACTT PMI0965 1038660 - 1039124 + | phage endopeptidase (lysis protein) PMI0966 1039749 - 1039168 - | hypothetical protein PMI0967 1040104 - 1040607 + | phage protein TERM 1337 1040685 - 1040673 - f 80 -7.7 -4.23007 | TATACAATGCTAAAA GTCAG AAC CTGAC AATAAAATATATCTT TERM 1338 1040924 - 1040943 + F 93 -6.4 -5.56673 | TTGATAAATAGTTAA CGGGAGCT TATT AGTTCTCG TTTTTTATTATCAAT PMI0970 1041531 - 1042751 + | hypothetical protein TERM 1339 1042895 - 1042915 + F 84 -5.4 -5.4505 | overlap 1042889 AACTGTGCTTGATAG CCATCAGT TAATT GCTGGTGG TTTTTTATTGAAGAA TERM 1340 1043350 - 1043389 + F 71 -5.2 -4.63527 | opp_overlap 1043359 1043363, overlap 1043352 1043355 1043359 AAGAACCTCATAATT TTTAATTAATAAACTCAC TTCT GTGAGCTTATTAATTGGC TTTTTACAATAATGA TERM 1341 1043352 - 1043387 + F 77 -10 -2.62098 | opp_overlap 1043359 1043363, overlap 1043350 1043355 1043359 GAACCTCATAATTTT TAATTAATAAACTCAC TTCT GTGAGCTTATTAATTG GCTTTTTACAATAAT TERM 1342 1043355 - 1043384 + F 80 -9.5 -3.45433 | opp_overlap 1043359 1043363, overlap 1043352 1043350 1043359 CCTCATAATTTTTAA TTAATAAACTCAC TTCT GTGAGCTTATTAA TTGGCTTTTTACAAT TERM 1343 1043380 - 1043359 - f 71 -8.1 -3.36135 | opp_overlap 1043355 1043352 1043350 1043359, overlap 1043363 ATAATTTTTAATTAA TAAACTCAC TTCT GTGAGCTTA TTAATTGGCTTTTTA TERM 1344 1043376 - 1043363 - f 74 -6.7 -4.3255 | opp_overlap 1043359 1043355 1043352 1043350, overlap 1043359 TTTTTAATTAATAAA CTCAC TTCT GTGAG CTTATTAATTGGCTT TERM 1345 1043474 - 1043446 - f 95 -6 -5.72622 | opp_overlap 1043446 1043448, overlap 1043427 1043448 TTTATAAACAAAAAA TACCCTGTGATT TTTAT ACTCACAGGGTG TTTAAATGAAGCAAA TERM 1346 1043446 - 1043474 + F 75 -8.2 -3.64703 | opp_overlap 1043427 1043446 1043448, overlap 1043448 TTTATAAACAAAAAA TACCCTGTGATT TTTAT ACTCACAGGGTG TTTAAATGAAGCAAA TERM 1347 1043472 - 1043448 - f 88 -8.6 -4.49311 | opp_overlap 1043446 1043448, overlap 1043427 1043446 TATAAACAAAAAATA CCCTGTGATT TTTAT ACTCACAGGG TGTTTAAATGAAGCA TERM 1348 1043448 - 1043472 + F 76 -8.6 -3.40597 | opp_overlap 1043427 1043448 1043446, overlap 1043446 TATAAACAAAAAATA CCCTGTGATT TTTAT ACTCACAGGG TGTTTAAATGAAGCA TERM 1349 1043908 - 1043926 + F 100 -8.9 -5.60689 | opp_overlap 1043908 CTAAACTTTGTTAAA CCTCACT CATTT AGTGAGG TTTTTTGTTATCTGA TERM 1350 1043926 - 1043908 - f 78 -8.9 -3.56594 | opp_overlap 1043908 CTAAACTTTGTTAAA CCTCACT CATTT AGTGAGG TTTTTTGTTATCTGA PMI0971 1044035 - 1045159 + | lipase TERM 1351 1045234 - 1045276 + F 90 -5.7 -5.54338 | AAAGATGAGTGATGT GAGATGCCAGATCATGTTT TGGTT AAAGAACATCTGGTATCTC TTTTTATTTTAATTC PMI0972 1045600 - 1045812 + | cold shock protein TERM 1352 1046001 - 1045986 - f 74 -6 -4.67943 | opp_overlap 1045986, overlap 1045981 GTTGAATATACAAAA CCTCGC TTCG GCGGGG TTTTTTTGCTATCTA TERM 1353 1045986 - 1046001 + F 100 -8.2 -5.60864 | opp_overlap 1045986 1045981 GTTGAATATACAAAA CCTCGC TTCG GCGGGG TTTTTTTGCTATCTA PMI0973 1046145 - 1046603 + | heat shock protein TERM 1354 1046658 - 1046626 - f 89 -10.7 -3.9578 | opp_overlap 1046628, overlap 1046628 AGATAGCTTAAATAA GATTAAGGCTGCACA TAA TGTGTAGCCTTAATT TTTTGTAATAGCCTA TERM 1355 1046628 - 1046656 + F 100 -15.5 -5.31275 | opp_overlap 1046626 1046628 ATAGCTTAAATAAGA TTAAGGCTGCACA TAA TGTGTAGCCTTAA TTTTTTGTAATAGCC TERM 1356 1046656 - 1046628 - f 100 -13.3 -3.56347 | opp_overlap 1046628, overlap 1046626 ATAGCTTAAATAAGA TTAAGGCTGCACA TAA TGTGTAGCCTTAA TTTTTTGTAATAGCC TERM 1357 1046827 - 1046815 - f 80 -7.7 -4.30719 | TGTGTTCATAACAAA CCTCT TTA AGAGG GAGCACTTTATGTGA PMI0974 1047094 - 1047555 + | hypothetical protein TERM 1358 1047595 - 1047574 - T 100 -9.5 -4.91109 | opp_overlap 1047574 TTTTGACTACAAAAA TGGATGGCT TAAT AACCATCCA TTTTTATTGCATAAA TERM 1359 1047574 - 1047595 + T 88 -7.3 -5.10461 | opp_overlap 1047574 TTTTGACTACAAAAA TGGATGGCT TAAT AACCATCCA TTTTTATTGCATAAA PMI0975 1048052 - 1047678 - | hypothetical protein TERM 1360 1047742 - 1047754 + g 75 -7.7 -4.00042 | opp_overlap 1047741, overlap 1047737 CAATCCGCAAGAAGC GTGAG TTT CTCAC TTATTTGCTCACCAA TERM 1361 1048077 - 1048091 + H 70 -7.2 -3.71265 | ACCTTTTTGTATGTA CTTACT TTT AGTAAG TTTAGGTGCTATGTT PMI0976 1048142 - 1048990 + | hypothetical protein PMI0977 1049231 - 1049428 + | lipoprotein PMI0978 1049994 - 1049452 - | hypothetical protein TERM 1362 1050075 - 1050088 + r 71 -5.3 -4.57341 | opp_overlap 1050084 TTTATTTATAGTATT CTGAA TAAG TTCAG TTTTTAGAAAAACTT PMI0979 1050257 - 1050159 - | hypothetical protein PMI0980 1050487 - 1050248 - | hypothetical protein TERM 1363 1050492 - 1050523 + r 81 -10.5 -2.96395 | ATAAAAAGCATGGAT TGTTGATAATTTT ATATAC AAAATTATCAACA TGTATAGTAATAAAT TERM 1364 1050572 - 1050585 + r 86 -3.9 -5.71712 | opp_overlap 1050572 ATAAATAATCTTAAA GTTAT CTTA ATAAC TTTTTTTGTATCACA PMI0981 1050834 - 1050691 - | hypothetical protein PMI0982 1051148 - 1050834 - | transcriptional regulator TERM 1365 1051176 - 1051212 + r 80 -9.7 -3.40967 | opp_overlap 1051170 1051183, overlap 1051174 GGTTATAAAGCATTT TTTAAAAGCAATTAACT TTT AGTTAACTGCTATTAAA TGTTATATATCTGTA TERM 1366 1051205 - 1051183 - R 90 -10 -4.10429 | opp_overlap 1051176 1051174, overlap 1051170 AAGCATTTTTTAAAA GCAATTAACT TTT AGTTAACTGC TATTAAATGTTATAT PMI0983 1051783 - 1051523 - | hypothetical protein TERM 1367 1051778 - 1051745 - G 100 -14.9 -3.24747 | opp_overlap 1051749 1051774, overlap 1051749 CGTTGATATTACTAA CAAAGCACCAATAAA TATA TTTATTGGTGCTTTA TACAAAGTTATTTCT TERM 1368 1051774 - 1051749 - G 100 -13.5 -4.28111 | opp_overlap 1051749, overlap 1051745 GATATTACTAACAAA GCACCAATAAA TATA TTTATTGGTGC TTTATACAAAGTTAT TERM 1369 1051749 - 1051774 + g 100 -13.5 -3.88137 | opp_overlap 1051749 1051745 GATATTACTAACAAA GCACCAATAAA TATA TTTATTGGTGC TTTATACAAAGTTAT ibrB 1052439 - 1051792 - | immunoglobulin-binding regulator TERM 1370 1052122 - 1052108 - G 71 -6.4 -4.22554 | overlap 1052109 TTACTCAATAAATAA CGATGG TAA CCATCA ACGACTTGCCATTGT TERM 1371 1052131 - 1052142 + g 74 -4.4 -4.91473 | ACCATCAACGACTTG CCAT TGTG ATGG TTTATTTTTGGATTG TERM 1372 1052354 - 1052366 + g 78 -2.7 -5.52023 | GATATTTTTATTTTA TTGAG AGC TTCAA TTTTTTGTTCATCAT ibrA 1053672 - 1052446 - | immunoglobulin-binding regulator TERM 1373 1053781 - 1053796 + H 70 -6.2 -4.2711 | opp_overlap 1053780 1053783, overlap 1053780 1053771 TTTATTTTAATACAG TAGAGT AACT ACTCTA TTTAATTGTTTTTAT PMI0986 1054230 - 1054892 + | hypothetical protein TERM 1374 1055079 - 1055055 - f 100 -13.1 -5.1848 | AAGTAACCGAAAAAA GCTTAGTTATA AAA TATAACTAAGC AAAACGGGGATAATC PMI0987 1055455 - 1055811 + | hypothetical protein PMI0988 1056014 - 1056184 + | hypothetical protein PMI0989 1056484 - 1057464 + | hypothetical protein TERM 1375 1057990 - 1058011 + F 85 -10.9 -3.32498 | opp_overlap 1057990 ATTGCAAAAAGAAAA GCCCAATGT GGCG GCATTGGGC TTAGTGTCTCAAATA TERM 1376 1058011 - 1057990 - f 100 -10.2 -5.27023 | opp_overlap 1057990 ATTGCAAAAAGAAAA GCCCAATG TGGCGG CATTGGGC TTAGTGTCTCAAATA TERM 1377 1058122 - 1058142 + F 80 -5.5 -5.16133 | ATAGAAGAATAGTGA TGTTCGTAT AAA ATATGAGCA TTTTTATCTTATCCT PMI0991 1058350 - 1058571 + | hypothetical protein TERM 1378 1058654 - 1058614 - f 100 -17.3 -4.43949 | opp_overlap 1058614 1058617 1058622, overlap 1058622 AAAATTAAATAGAAA TAATAAAAGAAGGCCAT ATAGCTA ATGGCCTTCTTTTATTA TGGTTTAAAGATAAT TERM 1379 1058614 - 1058654 + F 100 -17.3 -2.91873 | opp_overlap 1058614 1058622, overlap 1058617 1058622 AAAATTAAATAGAAA TAATAAAAGAAGGCCAT ATAGCTA ATGGCCTTCTTTTATTA TGGTTTAAAGATAAT TERM 1380 1058617 - 1058651 + F 100 -14.6 -3.60419 | opp_overlap 1058614 1058622, overlap 1058614 1058622 ATTAAATAGAAATAA TAAAAGAAGGCCAT ATAGCTA ATGGCCTTCTTTTA TTATGGTTTAAAGAT TERM 1381 1058622 - 1058646 + F 100 -10.1 -4.86902 | opp_overlap 1058622 1058614, overlap 1058617 1058614 ATAGAAATAATAAAA GAAGGCCAT ATAGCTA ATGGCCTTC TTTTATTATGGTTTA TERM 1382 1058646 - 1058622 - f 100 -10.1 -5.06472 | opp_overlap 1058617 1058614 1058622, overlap 1058614 ATAGAAATAATAAAA GAAGGCCAT ATAGCTA ATGGCCTTC TTTTATTATGGTTTA PMI0992 1058997 - 1059278 + | hypothetical protein TERM 1383 1059293 - 1059326 + F 72 -3.3 -5.29846 | AAAAATAGATTTAAT TAAAGTCTTATGTTT AGAG AATAATAAGGCTTTA TTTTTATTTCAAATT TERM 1384 1059352 - 1059407 + F 79 -7.2 -4.35116 | opp_overlap 1059363, overlap 1059355 1059357 1059361 1059363 1059399 AAATTTAAAATTTTC CAATGTAACAATGACCATATAATAAC CAGT GTTATTATATGGTCATCTTAATATTA TTTTAATATAAACTA TERM 1385 1059355 - 1059404 + F 88 -8.9 -4.29302 | opp_overlap 1059363, overlap 1059352 1059357 1059361 1059363 1059399 TTTAAAATTTTCCAA TGTAACAATGACCATATAATAAC CAGT GTTATTATATGGTCATCTTAATA TTATTTTAATATAAA TERM 1386 1059357 - 1059402 + F 80 -9.3 -3.74088 | opp_overlap 1059363, overlap 1059355 1059352 1059361 1059363 1059399 TAAAATTTTCCAATG TAACAATGACCATATAATAAC CAGT GTTATTATATGGTCATCTTAA TATTATTTTAATATA TERM 1387 1059361 - 1059398 + F 100 -14.5 -3.53836 | opp_overlap 1059363, overlap 1059357 1059355 1059352 1059363 ATTTTCCAATGTAAC AATGACCATATAATAAC CAGT GTTATTATATGGTCATC TTAATATTATTTTAA TERM 1388 1059396 - 1059363 - f 100 -17.1 -3.73068 | opp_overlap 1059361 1059357 1059355 1059352 1059363 TTTCCAATGTAACAA TGACCATATAATAAC CAGT GTTATTATATGGTCA TCTTAATATTATTTT TERM 1389 1059363 - 1059396 + F 100 -17.1 -3.32468 | opp_overlap 1059363, overlap 1059361 1059357 1059355 1059352 TTTCCAATGTAACAA TGACCATATAATAAC CAGT GTTATTATATGGTCA TCTTAATATTATTTT PMI0993 1059647 - 1060060 + | lipoprotein PMI0994 1060088 - 1060330 + | lipoprotein TERM 1390 1060372 - 1060335 - T 74 -7.2 -4.04806 | opp_overlap 1060337 CCTCATATTAAATAA TACCATCAAGGAGA GTCTATTTTT TGTCCTTGATGGTA TAGTCAATATAAGCG PMI0995 1060953 - 1060393 - | ATP-binding protein PMI0996 1061329 - 1061526 + | hypothetical protein map1 1061544 - 1062320 + | methionine aminopeptidase TERM 1391 1062386 - 1062410 + F 100 -9.5 -5.26155 | opp_overlap 1062375 1062388 TTTATATTATTTTAA TAGCTAGAAAT ATT ATTTTTAGCTA TTTTTCTATTTATAT TERM 1392 1062754 - 1062737 - g 75 -2.8 -5.243 | opp_overlap 1062737 TAAACTACTAAAAAA TCATAA AAAAGA TTATGA ATTACTAGTCGATTA PMI0998 1062555 - 1062938 + | phage antitermination protein TERM 1393 1063002 - 1062979 - f 78 -6.9 -4.36862 | opp_overlap 1062979 1062982, overlap 1062976 ATAGCAAATAAAGAA TTGCAATAA TATTGT TTATTGCAA TTTATCTAATGAGTT TERM 1394 1062979 - 1063002 + F 71 -6.9 -4.09822 | opp_overlap 1062976 1062979, overlap 1062982 ATAGCAAATAAAGAA TTGCAATAA TATTGT TTATTGCAA TTTATCTAATGAGTT TERM 1395 1063024 - 1063044 + F 77 -7.7 -3.9642 | TAATGAGTTCAACAT TTGCTAATA GGA TGTTAGCAA TTTAATTAAGTGTTT PMI0999 1063081 - 1063944 + | lipase TERM 1396 1064009 - 1064033 + T 86 -5.8 -5.4833 | gap 1, opp_overlap 1064009 GTTATATGATAGCAA GGTGGC-GTAA ATTA TTATGGCCACC TTTTTTATTAGATGA PMI1000 1064490 - 1064059 - | hypothetical protein PMI1001 1065025 - 1064609 - | IS element transposase TERM 1397 1065681 - 1065668 - g 75 -8.1 -4.06502 | CAGTTTTAAAGTAAA CCAGC GAAA GCTGG CAAGGCTTCAACGGA PMI1002 1065048 - 1066256 + | transposase PMI1003 1066360 - 1067097 + | hypothetical protein TERM 1398 1067118 - 1067139 + T 91 -8.1 -5.08169 | opp_overlap 1067118 TGAAAAAGCTTAAAA GCTAGCATT ATTA AATGTTAGC TTTTTTCAAGTATCT PMI1004 1067732 - 1067184 - | adenylate cyclase TERM 1399 1067522 - 1067539 + g 74 -4.1 -5.07486 | opp_overlap 1067522 TTACAATTAATAAAT TGATACC AGAG GGGATCA TTTTTCTTACGCATA TERM 1400 1067922 - 1067938 + r 71 -5.3 -4.59653 | opp_overlap 1067921 TTTTAGTGAAATTAT TTATTTT ATA AAAATAA TTTATGTTTTTGATT TERM 1401 1068109 - 1068093 - R 85 -5.1 -5.66684 | opp_overlap 1068093 TAAGCCATAAAAAAA GGGCT ACTGATG AGCCC TTTTAGGTAGCAAAA PMI1005 1068579 - 1068184 - | hypothetical protein TERM 1402 1068866 - 1068831 - R 100 -8.5 -5.38047 | opp_overlap 1068837 1068838, overlap 1068834 TATTTAGATAAAAAA TAAGAAATCAGGTTA TTGGCG TAACCTGACTTCTGA TAGGAAAAATCTTGG TERM 1403 1068863 - 1068834 - R 100 -10.2 -4.77122 | opp_overlap 1068837 1068838, overlap 1068831 TTAGATAAAAAATAA GAAATCAGGTTA TTGGCG TAACCTGACTTC TGATAGGAAAAATCT uspF 1069323 - 1068889 - | universal stress protein F ftnA 1069964 - 1070467 + | ferritin TERM 1404 1070545 - 1070570 + F 100 -12 -5.60993 | opp_overlap 1070545 AGATTAACATAATAA GCTCTACTGT AATCGC ACAGTAGAGC TTTTTTTATCGACCC TERM 1405 1070570 - 1070545 - f 100 -12.7 -3.99229 | opp_overlap 1070545 AGATTAACATAATAA GCTCTACTGTA ATCG CACAGTAGAGC TTTTTTTATCGACCC PMI1008 1071000 - 1071392 + | copper resistance protein TERM 1406 1072107 - 1072120 + G 73 -6.7 -4.26351 | ACCAAAGTATGTTAT GGCTA AAAA TAGCC TTTGTTGCCTTGATG PMI1009 1071392 - 1072291 + | copper resistance protein TERM 1407 1072289 - 1072316 + F 86 -5.8 -5.47218 | ATTAACTCACCTGTA TAGATTGATATA TACT TGTATTAATCTA TTTTTTTAAGTGGAA TERM 1408 1072361 - 1072372 + G 95 -4.4 -5.79595 | GTTTTTTATTTGCGG GCAT ATTG ATGC TTTTTTCTTTTCAAA PMI1010 1072339 - 1072680 + | hypothetical protein TERM 1409 1072907 - 1072921 + T 80 -7.8 -4.18018 | CACTTTTTAGCGCAC GGCTCG CAA TGAGCC TTTTCCCTAAGCCAG TERM 1410 1072932 - 1072954 + T 100 -15 -5.67967 | opp_overlap 1072936 GAGCCTTTTCCCTAA GCCAGGTAAA TGA TTTACCTGGC TTTTTTTATGATGCT PMI1011 1073223 - 1072981 - | hypothetical protein TERM 1411 1073374 - 1073394 + r 83 -8.3 -4.20531 | opp_overlap 1073374 TAGCAATAAAAAAAA CGGATCAAA TTT TGTGATCCG TTTTAAATAAATGTG TERM 1412 1073394 - 1073374 - R 100 -8.3 -6.13503 | opp_overlap 1073374 TAGCAATAAAAAAAA CGGATCAAA TTT TGTGATCCG TTTTAAATAAATGTG PMI1012 1075754 - 1073436 - | hypothetical protein PMI1013 1076952 - 1075696 - | hypothetical protein TERM 1413 1075883 - 1075852 - GH 74 -9 -3.1247 | opp_overlap 1075845 1075857 AGGTCCCATAGTGAA TGTCATTAATTGAT CTCG ATTAATTAATGACA TCATCAGCGCAATCA TERM 1414 1076650 - 1076635 - GH 89 -9 -4.42788 | opp_overlap 1076634 GGCAACGGCACAAAA GGCAAC CATT GTTGCC GTTAATGGAGAGCCT TERM 1415 1076835 - 1076796 - GH 76 -8.6 -3.39742 | opp_overlap 1076801, overlap 1076794 TAGAAAGAATTAATA GCCGAGTTAATGACCAAT CACG ATAGGTCGCTAACTTGGC TTGACATTGTGGGCA PMI1014 1077230 - 1077727 + | hypothetical protein proQ 1077823 - 1078515 + | ProP effector prc 1078535 - 1080595 + | tail-specific protease precursor (C-terminal-processing peptidase) TERM 1416 1080662 - 1080625 - f 71 -8.5 -2.81564 | opp_overlap 1080628, overlap 1080624 1080628 GAAAGTGATCCAAAT TTACCCCCAATAGTTGA TTAA TCAATTATTGGGGGTTT TTATTTCCCTATATT TERM 1417 1080628 - 1080659 + F 100 -16.8 -5.31519 | opp_overlap 1080625 1080624 1080628 AGTGATCCAAATTTA CCCCCAATAGTTGA TTAA TCAATTATTGGGGG TTTTTATTTCCCTAT TERM 1418 1080659 - 1080628 - f 100 -14.6 -2.66451 | opp_overlap 1080628, overlap 1080625 1080624 AGTGATCCAAATTTA CCCCCAATAGTTGA TTAA TCAATTATTGGGGG TTTTTATTTCCCTAT PMI1017 1081500 - 1082852 + | hypothetical protein htpX 1083232 - 1084110 + | probable protease (heat shock protein) TERM 1419 1084181 - 1084156 - T 89 -10.5 -3.90318 | opp_overlap 1084156 TTATCAGTTTACAAA TGCCAGAGACA GAAA TGTTTCTGGCA TTTTTGTTGGTGATC TERM 1420 1084156 - 1084181 + T 100 -12.7 -5.15167 | opp_overlap 1084156 TTATCAGTTTACAAA TGCCAGAGACA GAAA TGTTTCTGGCA TTTTTGTTGGTGATC TERM 1421 1084402 - 1084381 - T 100 -11.7 -5.83211 | opp_overlap 1084381 TATCAAAATAAAAAA GCCAGTTTA AAAT TAAACTGGC TTTAAGAGATTTAAC TERM 1422 1084381 - 1084402 + T 95 -11.7 -3.5936 | opp_overlap 1084381 TATCAAAATAAAAAA GCCAGTTTA AAAT TAAACTGGC TTTAAGAGATTTAAC PMI1019 1085826 - 1084435 - | sodium:dicarboxylate symporter TERM 1423 1085833 - 1085844 + r 73 -4.4 -5.04597 | AAAATTCATCTTAAC TCTC CAAC GAGA TTTTTATATATAAAT PMI1020 1086634 - 1086068 - | membrane-bound metal-dependent hydrolase TERM 1424 1086654 - 1086667 + r 73 -8.1 -3.44936 | TATCTATGCCTATAT GCGGT TTTT ACCGC TTGCTGTTCATTTAT TERM 1425 1086758 - 1086739 - R 74 -3 -5.32599 | gap 1 CATAAAAGATAAAAA TTGCCTTAA TTA TTAAG-CAA TAACAGAAATATTTT PMI1021 1087560 - 1086892 - | phosphatase TERM 1426 1087615 - 1087626 + H 71 -3 -5.19261 | overlap 1087614 ATTGTAGCAAGAGTT GATT GGAA AATC TTTTTTAATCAGTTT PMI1022 1087746 - 1088300 + | hypothetical protein TERM 1427 1088322 - 1088366 + T 88 -11.7 -2.91912 | opp_overlap 1088322 1088328 1088332, overlap 1088328 ATCACATTGACTTAA TTAAAATAAACCTCGCAGGAT AAC ATTTGGCGAGGTTTATTTTTA TCTATCGGTAAATAA TERM 1428 1088328 - 1088360 + T 100 -10.7 -5.04597 | opp_overlap 1088328 1088322 1088332, overlap 1088322 TTGACTTAATTAAAA TAAACCTCGCAGGAT AAC ATTTGGCGAGGTTTA TTTTTATCTATCGGT TERM 1429 1088360 - 1088328 - T 74 -6.3 -4.43477 | opp_overlap 1088322 1088328, overlap 1088322 1088332 TTGACTTAATTAAAA TAAACCTCGCAGGAT AAC ATTTGGCGAGGTTTA TTTTTATCTATCGGT PMI1023 1089266 - 1088394 - | kinase TERM 1430 1089182 - 1089200 + g 83 -7.4 -4.70266 | AAGTGTGGTGTATAT CACCGCTT GAA AGGTGGTG TTTTTCGCTGATCTT TERM 1431 1089401 - 1089369 - R 100 -11.6 -4.5477 | gap 1, opp_overlap 1089377 1089393, overlap 1089377 CAATACAGTATAAAA CTA-AAAAACGGGAT GATT ATCCCGTTTTTATAG TAATAAAGATTTTCA TERM 1432 1089377 - 1089392 + r 93 -9 -4.93296 | opp_overlap 1089369 1089377 TATAAAACTAAAAAA CGGGAT GATT ATCCCG TTTTTATAGTAATAA TERM 1433 1089392 - 1089377 - R 100 -9 -5.50313 | opp_overlap 1089377, overlap 1089369 TATAAAACTAAAAAA CGGGAT GATT ATCCCG TTTTTATAGTAATAA sitD 1090274 - 1089417 - | iron ABC transporter, membrane protein sitC 1091182 - 1090271 - | iron ABC transporter, membrane protein TERM 1434 1091025 - 1091013 - G 75 -10.5 -3.03104 | overlap 1091010 CCTAAAATATAAGCA CCGGC AAC GCCGG GAACGACGGAGTGGG TERM 1435 1091037 - 1091055 + g 70 -8.9 -3.14463 | CCGGGAACGACGGAG TGGGAGA GGGCA TCTCCCA TTAATGACCAACCTT sitB 1092072 - 1091185 - | iron ABC transporter, ATP-binding protein sitA 1092977 - 1092069 - | iron ABC transporter, periplasmic substrate-binding protein PMI1028 1093368 - 1094069 + | membrane-bound lytic murein transglycosylase marC 1094755 - 1094021 - | multiple antibiotic resistance protein TERM 1436 1094170 - 1094156 - G 75 -2.8 -5.24551 | GCAAATTAATAAAAA TCCCAT AAC ACGAGA AATAGCATCGATACC TERM 1437 1094413 - 1094423 + g 90 -3.2 -5.88565 | TGGGCGCCTGAGGAT TTCG ATG CGGA TTTTTTTCTTCTGAA PMI1030 1095458 - 1094862 - | acetyltransferase TERM 1438 1095837 - 1095824 - g 84 -2.3 -5.85425 | GAAATAAATAAAAAA GCGAA GAAA CCCGC TTATGTAATGGAAGT csaA 1095725 - 1096078 + | protein secretion chaperone PMI1032 1096170 - 1096856 + | transcriptional regulator TERM 1439 1096899 - 1096919 + F 82 -2.7 -5.9218 | opp_overlap 1096903, overlap 1096903 TTGATATGTGATTTA TTAATTAAT TTT ATTAATTTA TTTTTTTATTCTCTA TERM 1440 1096903 - 1096915 + F 76 -3.5 -5.33131 | opp_overlap 1096903, overlap 1096899 TATGTGATTTATTAA TTAAT TTT ATTAA TTTATTTTTTTATTC PMI1033 1097083 - 1097994 + | fimbrial subunit TERM 1441 1100176 - 1100157 - g 76 -3.6 -5.28942 | overlap 1100158 GATTTTAAAGAAAAA CTTCTG CAAGAAAT CAGAAG CAGAAGTCTTCATCA thrS 1098276 - 1100204 + | threonyl-tRNA synthetase PMI1035 1100208 - 1100747 + | translation initiation factor IF-3 TERM 1442 1100793 - 1100765 - f 73 -8.3 -3.40788 | gap 1, opp_overlap 1100761 1100767 1100769 AGGCAATTCAAGTAA TAGC-GTCAGTC TTTATT GACTGACTGCTA TTCGCCTTATTATTT rpmI 1100842 - 1101039 + | 50S ribosomal subunit protein L35 rplT 1101083 - 1101439 + | 50S ribosomal protein L20 TERM 1443 1101449 - 1101476 + F 100 -11.4 -4.59081 | opp_overlap 1101449 1101454, overlap 1101454 GCTTAATTAAGTCAA TGGAAGAGGGAG TTAA CTCCCTCTTTTA TTTTGTCTAAATTTG TERM 1444 1101454 - 1101471 + F 100 -11.3 -5.23292 | opp_overlap 1101449 1101454, overlap 1101449 ATTAAGTCAATGGAA GAGGGAG TTAA CTCCCTC TTTTATTTTGTCTAA TERM 1445 1101471 - 1101454 - f 88 -11.3 -3.21258 | opp_overlap 1101454 1101449, overlap 1101449 ATTAAGTCAATGGAA GAGGGAG TTAA CTCCCTC TTTTATTTTGTCTAA TERM 1446 1101636 - 1101652 + F 100 -12.3 -5.80951 | overlap 1101649 1101650 1101651 AAAAGTAGCGCCGGA GCCTCCA TTT TGGAGGC TTTTTTGTTTTCAGT TERM 1447 1101649 - 1101700 + F 71 -3 -5.19212 | opp_overlap 1101676, overlap 1101636 1101650 1101651 GAGCCTCCATTTTGG AGGCTTTTTTGTTTTCAGTACTCA AACT TGAGTTCAGAAATCAAAAGGGCAA TTTTTTAATCGTCAT TERM 1448 1101651 - 1101698 + F 79 -10 -2.81543 | opp_overlap 1101676, overlap 1101636 1101650 1101649 GCCTCCATTTTGGAG GCTTTTTTGTTTTCAGTACTCA AACT TGAGTTCAGAAATCAAAAGGGC AATTTTTTAATCGTC TERM 1449 1102472 - 1102462 - g 73 -5.4 -4.57569 | overlap 1102463 CGATTTTCTGAAAAA CTTC TTT GAAG AAGATATGGAAATTC pheS 1101764 - 1102747 + | phenylalanyl-tRNA synthetase alpha chain TERM 1450 1103761 - 1103744 - g 70 -5.7 -4.3255 | GTGTTAATGAAGAAA CTAAAAA CGTA TTTTTAG AGTGCGCATTCTTCT pheT 1102762 - 1105149 + | phenylalanyl-tRNA synthetase beta chain ihfA 1105154 - 1105450 + | integration host factor alpha-subunit TERM 1451 1105491 - 1105462 - f 89 -12.3 -2.674 | opp_overlap 1105467, overlap 1105467 GTAATACTTAAACAC CAAAACGGCTTTC TATT GAAAGCCGTTTTT TTTTCGACTTACTTC TERM 1452 1105467 - 1105486 + F 100 -12.2 -6.10489 | opp_overlap 1105467 1105462 ACTTAAACACCAAAA CGGCTTTC TATT GAAAGCCG TTTTTTTTTCGACTT TERM 1453 1105486 - 1105467 - f 100 -12.2 -4.50358 | opp_overlap 1105467, overlap 1105462 ACTTAAACACCAAAA CGGCTTTC TATT GAAAGCCG TTTTTTTTTCGACTT btuC 1105755 - 1106768 + | vitamin B12 import system permease protein btuD 1106770 - 1107519 + | vitamin B12 import ATP-binding protein TERM 1454 1107558 - 1107571 + F 74 -6.7 -4.24342 | opp_overlap 1107558 ATCGGAAATTATTAA GCCTT CTTT AAGGC TTTCTTAATAACAAC arnB 1107654 - 1108799 + | UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase TERM 1455 1109528 - 1109539 + G 70 -3.6 -4.87291 | overlap 1109536 GTAGGTAGTGTGATT GCTG TTGC CGGC TTTTTACTTGCCGTA TERM 1456 1109604 - 1109617 + G 71 -6.7 -3.97056 | TTTGGGCGGCAGACG GAGTG TTTA CACTC TTTGCTATCTTATTC arnC 1108799 - 1109779 + | undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase arnA 1109779 - 1111761 + | bifunctional polymyxin resistance protein [includes: UDP-glucuronic acid decarboxylase and UDP-4-amino-4-deoxy-l-arabinose formyltransferase TERM 1457 1111897 - 1111914 + G 93 -12.7 -4.07687 | opp_overlap 1111895 1111892 GTCCAGATAATATGG GGCGCCA TTTA TGGCGCC TTTTAAAACCGAAAT PMI1046 1111761 - 1112654 + | polysaccharide deacetylase TERM 1458 1112690 - 1112707 + G 100 -4.8 -6.22691 | overlap 1112689 GGGCGAGTAAAATCG GGGCCA TCCTCT TGGCTC TTTTTTTTGTTCTTA TERM 1459 1113196 - 1113213 + G 75 -5.6 -4.67234 | overlap 1113203 TTAGCTTGTGGTATG GCCTTT ATGACC AAAGGC TTTTTGGCATTAGCT TERM 1460 1113826 - 1113836 + G 71 -6.8 -4.1021 | TCAAAATGGGTATTA GCGA TAG TCGC TTTCTCATTATGGGG arnT 1112662 - 1114323 + | undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase TERM 1461 1114425 - 1114446 + G 79 -9.5 -3.7282 | opp_overlap 1114425 AATTCAACCACTAAA GCCAGAAAG ACGA TTTTCTGGC TTATTACTGCCATCG TERM 1462 1114446 - 1114425 - g 77 -8.8 -3.85362 | opp_overlap 1114425 AATTCAACCACTAAA GCCAGAAA GACGAT TTTCTGGC TTATTACTGCCATCG PMI1048 1114323 - 1114664 + | hypothetical protein PMI1049 1114661 - 1115062 + | hypothetical protein nlpC 1115210 - 1115701 + | lipoprotein TERM 1463 1115735 - 1115756 + F 80 -5.3 -5.21709 | gap 1, overlap 1115740 GCTAACCTACTGAGT GTTATGCTAT CTT ATAGC-TAAC TTTTTTCATATAGGG lplA 1115779 - 1116798 + | lipoate-protein ligase A TERM 1464 1116887 - 1116855 - T 100 -22.3 -4.38927 | opp_overlap 1116855 1116859, overlap 1116859 GTTTGATATAATAAA CAAAGCGGGAAAACA TGA TGTTTTCCCGCTTTG TTTTGTCAGTCAATA TERM 1465 1116855 - 1116887 + T 100 -22.3 -4.431 | opp_overlap 1116855 1116859, overlap 1116859 GTTTGATATAATAAA CAAAGCGGGAAAACA TGA TGTTTTCCCGCTTTG TTTTGTCAGTCAATA TERM 1466 1116859 - 1116883 + T 100 -17.3 -4.7878 | opp_overlap 1116855 1116859, overlap 1116855 GATATAATAAACAAA GCGGGAAAACA TGA TGTTTTCCCGC TTTGTTTTGTCAGTC TERM 1467 1116883 - 1116859 - T 100 -17.3 -4.76087 | opp_overlap 1116859 1116855, overlap 1116855 GATATAATAAACAAA GCGGGAAAACA TGA TGTTTTCCCGC TTTGTTTTGTCAGTC pqrA 1117283 - 1116915 - | AraC-family transcriptional regulator TERM 1468 1117305 - 1117289 - R 70 -4.3 -4.87665 | opp_overlap 1117302, overlap 1117290 1117291 1117302 TTTCAGCCATAAAAA CCTCCCA CAA TAGGTGG GGACATAGTGCCCAA TERM 1469 1117468 - 1117450 - R 74 -9 -3.11784 | overlap 1117447 AGTAATAAACAATGA TTGATAGA TAG TCTATCAA AAAGAAAGTGATAAG TERM 1470 1117851 - 1117815 - R 75 -9.6 -2.96745 | overlap 1117814 GATATGCTAAATAAG CTCACTCGCAGA CAACGGGAGACAC TCTGCGAGTGAG ACGAAAGATTTTTTA PMI1053 1119066 - 1117864 - | FAD dependent oxidoreductase PMI1054 1119797 - 1119084 - | GntR-family transcriptional regulator TERM 1471 1119451 - 1119479 + g 72 -9.6 -3.06796 | opp_overlap 1119457, overlap 1119457 TCTTCTGGTGTTCGA CGTAAAGCGGCA ATGGC TGCCGCTTCATG TTCAATGACCTCACG TERM 1472 1119457 - 1119473 + g 75 -9.4 -3.38072 | opp_overlap 1119457, overlap 1119451 GGTGTTCGACGTAAA GCGGCA ATGGC TGCCGC TTCATGTTCAATGAC TERM 1473 1119473 - 1119457 - G 80 -10.1 -3.64703 | opp_overlap 1119457 1119451 GGTGTTCGACGTAAA GCGGCAA TGG CTGCCGC TTCATGTTCAATGAC TERM 1474 1119652 - 1119687 + g 71 -6.8 -4.08945 | gap 1, overlap 1119653 1119656 AATGCTTCTCTGATG GGAACTCTGCTAACGCC AAA GGCGTCAGC-GAGTACA TTTTCAGACGGTAGT TERM 1475 1119653 - 1119686 + g 75 -10.3 -3.05046 | gap 1, overlap 1119652 1119656 ATGCTTCTCTGATGG GAACTCTGCTAACGCC AAA GGCGTCAGC-GAGTAC ATTTTCAGACGGTAG TERM 1476 1119656 - 1119683 + g 76 -10.6 -2.74605 | gap 1, overlap 1119653 1119652 CTTCTCTGATGGGAA CTCTGCTAACGCC AAA GGCGTCAGC-GAG TACATTTTCAGACGG PMI1055 1121765 - 1119798 - | TRAP-type C4-dicarboxylate transport system permease component TERM 1477 1120095 - 1120063 - G 71 -7.1 -3.80142 | opp_overlap 1120069 GAGATAACACTTAAA TTATCACCTTGCATC AGT AATGCAGGGTTATAA ACCAAAATAAAAGGA TERM 1478 1121175 - 1121160 - G 79 -5.4 -4.88795 | ACCGAATAAAATAAA TACCAC GATA GCGGTA GAGGCAGTAGAGAGT TERM 1479 1121404 - 1121416 + g 70 -2.7 -5.06816 | ATCGCATAATCCATT GTGTT GGG AATAC TTTTTCTTACCACAT PMI1056 1122812 - 1121778 - | TRAP-type transport system substrate-binding protein PMI1057 1123730 - 1123218 - | hypothetical protein TERM 1480 1123404 - 1123385 - G 73 -2.2 -5.27938 | opp_overlap 1123388, overlap 1123388 AGCGTGAAATAAAAA GAATAAAG AATG CTTTATTT TTTAACAGTTGTTGT TERM 1481 1123388 - 1123401 + g 74 -3.9 -5.06103 | opp_overlap 1123385 1123388 GTGAAATAAAAAGAA TAAAG AATG CTTTA TTTTTTAACAGTTGT TERM 1482 1123717 - 1123729 + g 86 -7.7 -4.86902 | opp_overlap 1123717 GTGTCAAGCATTGAA TGGAG TAT CTCCA TTTTATTCTCCTTTG TERM 1483 1123853 - 1123892 + r 75 -8 -3.73914 | gap 1, opp_overlap 1123852 1123847 1123853 GCTTGTAAATAAAAT GCCCCTCCATTCTAATG ACTAATC CGTTA-ACTGGAGGGGC TTATTACTAAATAAT budB 1125578 - 1123899 - | acetolactate synthase, catabolic TERM 1484 1125128 - 1125103 - G 85 -6.7 -5.12707 | GGAAAGGTTAAAAAA GCCGAGCCGGG ACGA CCTGACTCCGC ATGACGAAAAGCATT TERM 1485 1125659 - 1125691 + r 74 -8.5 -3.23452 | overlap 1125653 1125664 CAGTTTTCGGCTTGT TCTATTGCCTGATGA AGG TCATCGGGCATTAAA TTAGCTTCTAAGAAT TERM 1486 1125664 - 1125686 + r 100 -12.8 -3.21705 | overlap 1125659 1125653 TTCGGCTTGTTCTAT TGCCTGATGA AGG TCATCGGGCA TTAAATTAGCTTCTA budA 1126479 - 1125643 - | alpha-acetolactate decarboxylase TERM 1487 1126221 - 1126207 - G 71 -7.1 -3.79519 | AACGTTACTATCAAA GGCGA CCAAT TCGCC ATCAAGATGATTAAA TERM 1488 1126695 - 1126679 - H 78 -2.3 -5.88061 | overlap 1126681 AAAAAATTAAAAAAA TATCAAT GTT ATTGATG AGGTTGCTTTGTTTG TERM 1489 1126949 - 1126963 + H 79 -7.2 -4.41494 | opp_overlap 1126949 1126948 AAGAAGGATAAAAGT GTTACA AAA TGTAAC TTTTAATTCCAGGTA TERM 1490 1127054 - 1127070 + H 87 -5.2 -5.59564 | opp_overlap 1127054 ATTTGTCATTATATA TCAACA GATTA TGTTGA TTTTTTTACATTTAT PMI1060 1127237 - 1127512 + | fimbrial operon regulator PMI1061 1127562 - 1128080 + | fimbrial protein TERM 1491 1128074 - 1128094 + F 74 -8.5 -3.31175 | opp_overlap 1128078, overlap 1128073 TTATGCAGTAGCTTA TAAATAATG TTT CATTATTTA ATTTTATAATGTCTA TERM 1492 1128233 - 1128263 + F 100 -12.8 -3.61328 | opp_overlap 1128242, overlap 1128238 1128242 TATAAGCATTATGAC TGGAATAAAGGGTC ATT GATCCTTTATTTCA TTTGAAAATATTAAT TERM 1493 1128238 - 1128258 + F 85 -9.1 -4.06502 | opp_overlap 1128242, overlap 1128233 1128242 GCATTATGACTGGAA TAAAGGGTC ATT GATCCTTTA TTTCATTTGAAAATA TERM 1494 1128242 - 1128254 + F 71 -5.5 -4.62772 | opp_overlap 1128242, overlap 1128238 1128233 TATGACTGGAATAAA GGGTC ATT GATCC TTTATTTCATTTGAA TERM 1495 1128629 - 1128641 + G 73 -5.5 -4.50218 | overlap 1128626 GATATTAGCCGTTAT CCTGG GGC TCAGG TTATTTTTGATAATT TERM 1496 1128948 - 1128930 - g 79 -10.4 -3.56056 | AATCAATACAAGGAA GTTTTACC GTA GGTAAAAC AATAACCTCTTTATC PMI1062 1128290 - 1130665 + | Fimbrial usher protein PMI1063 1130658 - 1131326 + | fimbrial chaperone PMI1064 1131337 - 1132347 + | fimbrial protein PMI1065 1132348 - 1132893 + | fimbrial subunit PMI1066 1132904 - 1133452 + | fimbrial protein PMI1067 1133454 - 1134002 + | fimbrial protein PMI1068 1134588 - 1134187 - | hypothetical protein TERM 1497 1135794 - 1135816 + r 71 -8.6 -2.83271 | opp_overlap 1135798 1135813, overlap 1135798 1135807 AGCGCAAGCGCTGTT CAAATTTGTT CCC GACAAATTTG TCATTGTCAAAATAC PMI1070 1136822 - 1136286 - | hypothetical protein PMI1071 1136979 - 1136839 - | hypothetical protein TERM 1498 1137414 - 1137436 + r 71 -8.6 -2.83449 | opp_overlap 1137418 1137433, overlap 1137418 1137427 1137433 AGCGCAAGCGCTGTT CAAATTTGTT CCC GACAAATTTG TCATTGTCAAAATAT TERM 1499 1137898 - 1137883 - R 95 -10.4 -4.323 | opp_overlap 1137880 GGCAAATATTGAAAA GCAGGG TTGC CCCTGC TGGTAGTTATGAAAA hocA 1138424 - 1137942 - | phosphotriesterase TERM 1500 1138115 - 1138087 - G 71 -5.3 -4.55128 | opp_overlap 1138087 1138091, overlap 1138091 ATCCCGAAAGTAAAA TATACCCCTTCTA CAT TAATAGGGGTGTA GTTATTCTGATGCCC TERM 1501 1138996 - 1139018 + r 71 -8.6 -2.83449 | opp_overlap 1139000 1139015, overlap 1139000 1139009 1139015 AGCGCAAGCGCTGTT CAAATTTGTT CCC GACAAATTTG TCATTGTCAAAATAT TERM 1502 1140376 - 1140364 - R 72 -9.1 -2.71144 | opp_overlap 1140363 1140364 GAGCTTCTTCAACCA GTCGC CCA GCGAC GTTATAGGTGTATTG TERM 1503 1140364 - 1140376 + r 72 -9.1 -2.65068 | opp_overlap 1140364, overlap 1140363 GAGCTTCTTCAACCA GTCGC CCA GCGAC GTTATAGGTGTATTG TERM 1504 1140503 - 1140491 - R 73 -7.7 -3.57106 | opp_overlap 1140491, overlap 1140487 TTCAATTGAAATTAA TGCAC CTT GTGCA TTGTAATGGTAGTGG TERM 1505 1140491 - 1140503 + r 71 -7.7 -3.45023 | opp_overlap 1140491 1140487 TTCAATTGAAATTAA TGCAC CTT GTGCA TTGTAATGGTAGTGG TERM 1506 1142007 - 1142022 + r 80 -5.4 -5.24129 | opp_overlap 1142007 CTAAAATCCAATTCA TCCTCG TCAT TGAGGA TTTTTTGTCCGCCAA TERM 1507 1142467 - 1142480 + r 70 -8.1 -3.1506 | opp_overlap 1142464 TACGGGTAGACATTG CGGCA GGCT TGCCG TTAATACGAACATTT PMI1075 1143225 - 1142794 - | hypothetical protein TERM 1508 1143572 - 1143560 - R 80 -6.3 -4.86621 | ATTTTTAAGTAAAAA CTCAT TAA ATGAG TGGGATGCAAATTTA TERM 1509 1143639 - 1143679 + r 86 -7.1 -4.81163 | gap 1, opp_overlap 1143640, overlap 1143640 TTTTTATAAAATAAA ACAGCATAAACTTT-CGA TAAGTC TCGTAGAGTTTATGCTGC TTTTGTTAGTATTTA TERM 1510 1143640 - 1143678 + r 85 -10.6 -3.47071 | gap 1, opp_overlap 1143640, overlap 1143639 TTTTATAAAATAAAA CAGCATAAACTTT-CGA TAAGTC TCGTAGAGTTTATGCTG CTTTTGTTAGTATTT TERM 1511 1143678 - 1143640 - R 93 -8.4 -5.18371 | gap 1, opp_overlap 1143639 1143640 TTTTATAAAATAAAA CAGCATAAACT-TTCGA TAAGTC TCGTAGAGTTTATGCTG CTTTTGTTAGTATTT engD 1144832 - 1143741 - | GTP-dependent nucleic acid-binding protein TERM 1512 1144884 - 1144859 - R 84 -5.5 -5.36441 | opp_overlap 1144859 1144869 TTGTCACATAAAAAA CAACAGGAA AGGGGGAG CTCCTGTTG TGTGCTGTTAAAAAA TERM 1513 1144982 - 1144967 - R 82 -6.1 -5.07652 | TTGCGCAAAAGAAAA GGGCA TGGCAT TGCCC AGTTAACTTATTTGA pth 1145608 - 1145024 - | peptidyl-tRNA hydrolase TERM 1514 1145972 - 1145984 + G 77 -7.7 -4.26202 | overlap 1145975 AATATAAACATGCTT TTGCC GTT GGCAA TTTATTGATGGCTAT PMI1082 1145953 - 1146231 + | hypothetical protein TERM 1515 1146340 - 1146362 + T 100 -6.2 -5.72254 | opp_overlap 1146340 ATACATATCTAAAGA CCCGCTGATA AAG TGATAGCGGG TTTTTTATTGTTTAA TERM 1516 1146407 - 1146432 + T 100 -11.9 -4.04174 | opp_overlap 1146407 AAAGATAACAAAAAA CCCGCTATAAC ATAG GCTATAGCGGG TTTAATTATCTCAAA TERM 1517 1146432 - 1146407 - T 100 -14.1 -5.66338 | opp_overlap 1146407 AAAGATAACAAAAAA CCCGCTATAAC ATAG GCTATAGCGGG TTTAATTATCTCAAA prsA 1147416 - 1146469 - | ribose-phosphate pyrophosphokinase ispE 1148380 - 1147505 - | 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase TERM 1518 1148077 - 1148089 + g 76 -3.3 -5.28778 | CTCCCCCTAAACCTC CTCCC ATG GGCAG TTTTTTATCAATACT lolB 1149015 - 1148377 - | outer-membrane lipoprotein TERM 1519 1149014 - 1149003 - G 73 -5.8 -4.56775 | ATTTGGTTGGAAAAA TGCG TGAG CGCA TAGCTGAGATATTCC TERM 1520 1149070 - 1149056 - H 70 -4.2 -5.00616 | CTTTGTTGCAAAAAA GCGTAT CAT AAACGC GAAGATATAACGATA TERM 1521 1149309 - 1149319 + G 79 -5.4 -4.93296 | opp_overlap 1149292 CCCGTAGCGTTACGT GAGA AAG TCTC TTTTTCTCCTGATAC hemA 1149255 - 1150517 + | glutamyl-tRNA reductase TERM 1522 1151426 - 1151401 - g 71 -3.9 -4.98255 | GCCGAAGTACAAAAA CGTCAAGAAGC CGAA GCATCTGAACG CCGTAACTTATTAGG prfA 1150546 - 1151628 + | peptide chain release factor 1 TERM 1523 1151663 - 1151640 - g 73 -7.5 -4.10331 | gap 1, overlap 1151643 1151644 TTAATGAATTATAAA CAATGGCTGC ATCAA GCAGCC-TTG CAATTAATTGATAGT TERM 1524 1151660 - 1151644 - g 72 -9.4 -3.08415 | overlap 1151643 1151640 TGAATTATAAACAAT GGCTGC ATCAA GCAGCC TTGCAATTAATTGAT hemK 1151628 - 1152476 + | protein methyltransferase (protein-glutamine N-methyltransferase) sirB1 1152457 - 1153269 + | hypothetical protein kdsA 1153327 - 1154181 + | 2-dehydro-3-deoxyphosphooctulonate aldolase TERM 1525 1154218 - 1154238 + G 95 -14 -3.40522 | opp_overlap 1154214 TGTAGTGAATATGTT CGGCGCTG ATCTC CAGCGCCG TTATCATGAAAAAAT PMI1091 1154189 - 1155118 + | hypothetical protein PMI1092 1155196 - 1155474 + | hypothetical protein TERM 1526 1155576 - 1155619 + T 76 -5.5 -4.99861 | opp_overlap 1155571 1155579, overlap 1155578 TAAATAATAACTTAA TAATTAAGCCCTTAATTAA ATAGTG TAAATTAAGGGCTTAAAGA TTTTTATAATTAATA TERM 1527 1155616 - 1155579 - T 95 -11.6 -3.78556 | opp_overlap 1155578 1155576, overlap 1155571 ATAATAACTTAATAA TTAAGCCCTTAATTAA ATAGTG TAAATTAAGGGCTTAA AGATTTTTATAATTA PMI1093 1157344 - 1155644 - | sulfate transporter TERM 1528 1156121 - 1156111 - G 73 -5.4 -4.49167 | opp_overlap 1156111 1156109 AACATAATACTAAAA CGAT AAT ATCG TCTTTTGGTGCATGA TERM 1529 1156405 - 1156417 + g 70 -2.7 -5.03715 | opp_overlap 1156401 GACCGACTAACTCAC CATTA GAG TGATG TTTTTTCCCCGTCAT TERM 1530 1157909 - 1157872 - H 100 -13.7 -3.22858 | opp_overlap 1157879 1157880, overlap 1157880 TTAAGGACAGCAAGA CAAAAAAACGCCTAGTT TTTT AACTAGGCGCTTTCTTA GAAGATGGCGGTGAG TERM 1531 1157879 - 1157902 + H 90 -9.6 -4.16016 | opp_overlap 1157872 1157880, overlap 1157880 CAGCAAGACAAAAAA ACGCCTAGTT TTTT AACTAGGCGC TTTCTTAGAAGATGG TERM 1532 1157880 - 1157901 + H 100 -13.1 -3.09288 | opp_overlap 1157872 1157880, overlap 1157879 AGCAAGACAAAAAAA CGCCTAGTT TTTT AACTAGGCG CTTTCTTAGAAGATG TERM 1533 1157901 - 1157880 - H 100 -13.1 -5.82172 | opp_overlap 1157880 1157879, overlap 1157872 AGCAAGACAAAAAAA CGCCTAGTT TTTT AACTAGGCG CTTTCTTAGAAGATG TERM 1534 1158165 - 1158179 + H 70 -4.2 -5.10497 | overlap 1158166 AATGTGATCTCTTTT GGGATG TAA CATCCA TTTTTTAGCTAAATT TERM 1535 1158166 - 1158178 + H 73 -7.7 -3.65214 | overlap 1158165 ATGTGATCTCTTTTG GGATG TAA CATCC ATTTTTTAGCTAAAT TERM 1536 1158579 - 1158540 - g 83 -5 -5.19251 | overlap 1158544 CAAGAGCAACAAAAA CCAGGCACATTACCCG CTGGGGTT CCGGTAATGCGCTTAG AAGACACGGGTATGG PMI1094 1158306 - 1159247 + | 2-hydroxyacid dehydrogenase TERM 1537 1159275 - 1159302 + F 100 -8.7 -5.81412 | opp_overlap 1159275 TAATATATATATAAA TAGACAATAAA TTTTAT TTTATTGTCTA TTTTTTTTGCCTAAA TERM 1538 1159302 - 1159275 - f 87 -8.7 -4.2109 | opp_overlap 1159275 TAATATATATATAAA TAGACAATAAA TTTTAT TTTATTGTCTA TTTTTTTTGCCTAAA TERM 1539 1161118 - 1161096 - g 71 -6.4 -4.18197 | opp_overlap 1161096 ATTTTTCATTTAAAA TTCAACCAAA AGA TTTAGTCGAA TTTATTAATCAAGGG PMI1095 1159439 - 1162300 + | hypothetical protein TERM 1540 1162912 - 1162878 - g 73 -2.4 -5.24129 | opp_overlap 1162901, overlap 1162909 GCTTTCTATAAAAAA CATCTTGATG-CATTT AAAGA AAATGTCA-CAAGACG TTTAACGACAGTGTT PMI1096 1162545 - 1163153 + | 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein TERM 1541 1163202 - 1163247 + F 100 -10.8 -5.2015 | ATAGCATGGGATTAG GCGCGTTTCTTAT-ATTAGGCT ATAT AGCTTAATGATAAGA-GCGCGC TTTTTCTGTTATTAA PMI1097 1163377 - 1163934 + | chaperone TERM 1542 1163974 - 1163958 - T 88 -6.6 -5.19328 | ATCCTATAATAAAAA CGTTGA TGTTT TCAACG GCACCCTAGAATAGC PMI1098 1164726 - 1164172 - | lipoprotein mdtH 1165970 - 1164768 - | multidrug resistance protein (MFS-family transporter) rimJ 1166165 - 1166746 + | ribosomal-protein-alanine acetyltransferase TERM 1543 1167815 - 1167797 - g 76 -7.4 -4.21194 | CTTCATTATCTAAAA GTTTTGCC AGC GGCAACAC ACAAGAATATCAGAA TERM 1544 1168345 - 1168355 + G 70 -5.4 -4.4078 | overlap 1168335 GGGAATATGCTAATG CGTA TTT TACG TTTATTACTTGTTGT mviN 1166917 - 1168452 + | hypothetical protein TERM 1545 1168470 - 1168498 + F 83 -9.5 -3.83559 | TTATTGTCAAACTGG CGCCTCACTGAGT GTA ACAAAGTGGGGCG TTGTCTATTTATTAC PMI1102 1169492 - 1169764 + | lipoprotein TERM 1546 1169883 - 1169862 - T 100 -14.5 -4.93365 | opp_overlap 1169862 TTCTATAATGAAAAA CCGATGGTG ATTT CACCATCGG TTTTTTTAGATAAAT TERM 1547 1169862 - 1169883 + T 100 -14.5 -5.47821 | opp_overlap 1169862 TTCTATAATGAAAAA CCGATGGTG ATTT CACCATCGG TTTTTTTAGATAAAT argS 1171641 - 1169911 - | arginyl-tRNA synthetase TERM 1548 1171480 - 1171490 + g 100 -6.8 -5.76949 | overlap 1171477 TGCGAGTTGTCGGGG TGGG ATA CCCA TTTTTTTTGCCGCTC PMI1104 1171814 - 1172368 + | hypothetical protein cutC 1172535 - 1173287 + | copper homeostasis protein TERM 1549 1173332 - 1173310 - T 89 -10.6 -3.89215 | opp_overlap 1173310 TTTTATAAATCGAAA GGGAGTGATA GTG TTTCACTCCC TTTATTAAATTTATT TERM 1550 1173310 - 1173332 + T 95 -10.6 -4.31837 | opp_overlap 1173310 TTTTATAAATCGAAA GGGAGTGATA GTG TTTCACTCCC TTTATTAAATTTATT PMI1106 1174932 - 1173343 - | lipoprotein PMI1107 1176849 - 1175287 - | ABC transporter, ATP-binding protein TERM 1551 1177139 - 1177159 + r 74 -5.5 -4.84359 | opp_overlap 1177129 1177139 AACAGGTTATAAAAA GGGTATT ATTGATA AATACCC TTTTTATAGAAATGA TERM 1552 1177159 - 1177139 - R 74 -5.5 -4.87273 | opp_overlap 1177139, overlap 1177129 AACAGGTTATAAAAA GGGTATT ATTGATA AATACCC TTTTTATAGAAATGA PMI1108 1178160 - 1177186 - | hypothetical protein PMI1109 1178912 - 1178163 - | hypothetical protein TERM 1553 1179063 - 1179082 + r 72 -5.8 -4.51777 | overlap 1179065 AGCAAGGATGTCTAT TGTGATCA TGGA TGATCATA TTTTCCTTGTGGTAT PMI1110 1179495 - 1179097 - | hypothetical protein aspS 1179763 - 1181547 + | aspartyl-tRNA synthetase ntpA 1181548 - 1181985 + | DATP pyrophosphohydrolase TERM 1554 1182231 - 1182214 - g 77 -8.3 -3.88498 | TCGTGACACACTAAA CCGCGCG ATTG CTCGCGG TGCGGGAAATGATGA PMI1113 1182014 - 1182769 + | hypothetical protein TERM 1555 1182836 - 1182853 + F 74 -6.3 -4.53303 | opp_overlap 1182836 1182831 GCGAAGAGAAGAGCA GAGCAAG CGTA TTTGCTC TTTTCTCTCGCCATC TERM 1556 1183127 - 1183115 - g 72 -3.3 -5.0538 | CTTTATGGCAAAAAA TGCAG ACT CAGCA TTAAAATTAGGCCAA ruvC 1182894 - 1183415 + | Holliday junction nuclease TERM 1557 1183451 - 1183468 + F 100 -7.7 -5.84432 | ATTAGTTTTTCGCAG GCTGGAT ATAC GTCCAGC TTTTTTTATGTTATA TERM 1558 1183571 - 1183554 - g 77 -6.3 -4.58395 | gap 1 GTTATTCTTGAAAAA CAGCCACC AGT GGTG-CTG ATCGAAGCGGGTAAT ruvA 1183518 - 1184141 + | Holliday junction ATP-dependent DNA helicase ruvB 1184154 - 1185164 + | Holliday junction ATP-dependent DNA helicase hcp 1185979 - 1186497 + | hypothetical protein TERM 1559 1186503 - 1186532 + F 93 -9.3 -4.79752 | opp_overlap 1186500, overlap 1186506 1186507 CGAAGCGTAATACCG TTATGACGAGTCC TTGG GGACTCGTCCTTA TTTTGTATTGTTCCC TERM 1560 1186506 - 1186529 + F 100 -11 -4.47977 | opp_overlap 1186500, overlap 1186503 1186507 AGCGTAATACCGTTA TGACGAGTCC TTGG GGACTCGTCC TTATTTTGTATTGTT TERM 1561 1186507 - 1186528 + F 100 -14.5 -3.26346 | opp_overlap 1186500, overlap 1186506 1186503 GCGTAATACCGTTAT GACGAGTCC TTGG GGACTCGTC CTTATTTTGTATTGT PMI1118 1186581 - 1188683 + | Rhs-family protein TERM 1562 1189650 - 1189662 + G 70 -7.7 -3.78934 | CGTCGTCTTATTTCT GTCGT GAA ACGAC TTGTTATCCCCGCAA PMI1119 1188696 - 1189751 + | hypothetical protein TERM 1563 1190278 - 1190267 - g 89 -4.4 -5.63504 | AAGCGGATAAAAAAA GAGA TGAT TCTC TAAATGATATTGACA TERM 1564 1191658 - 1191668 + G 70 -5.4 -4.4715 | GAAAGCACAACCTCA TCTC CTC GAGA TTTTGTACGTTGCGA TERM 1565 1192306 - 1192279 - g 90 -12.8 -3.57561 | gap 1 GGTGAATTGCTCAAA GCCATTACGC-CC AAT GGTGCGCAATGGC AATACCACTATAACC TERM 1566 1194011 - 1193993 - g 71 -7.4 -3.89881 | opp_overlap 1193996, overlap 1193996 ATCAACCCGGAGAAA TAACGCCC ACC GCGCGTTA TCAACAGGGCAAACT PMI1120 1189744 - 1194855 + | Rhs-family protein TERM 1567 1195206 - 1195234 + G 100 -16.3 -4.183 | TGAAGATCCTAATTC CCCTACTAAAATA AAA TATTTTAGTAGGG TTTATTCAAAGTTAA PMI1121 1194871 - 1195482 + | hypothetical protein PMI1122 1195540 - 1195719 + | hypothetical protein PMI1123 1195694 - 1195876 + | hypothetical protein PMI1124 1195873 - 1196193 + | hypothetical protein TERM 1568 1196700 - 1196682 - g 71 -7.4 -3.89881 | opp_overlap 1196685, overlap 1196685 ATCAACCCGGAGAAA TAACGCCC ACC GCGCGTTA TCAACAGGGCAAACT TERM 1569 1197193 - 1197203 + G 70 -5.4 -4.38927 | overlap 1197189 TGGTGGCTTTGTAGA TTCC AAT GGAA TTTATTATATGGGGG PMI1125 1196255 - 1197397 + | Rhs-family protein PMI1126 1197400 - 1197729 + | hypothetical protein PMI1127 1197795 - 1197947 + | hypothetical protein TERM 1570 1199822 - 1199806 - g 71 -5.3 -4.64673 | overlap 1199811 GAAAAAAAAATCAAA TATTATT ATT AATAATA ATGATGATGATTGGT PMI1129 1199654 - 1199941 + | hypothetical protein TERM 1571 1200039 - 1200090 + G 83 -6.5 -5.03961 | opp_overlap 1200039 1200043, overlap 1200046 1200048 CATTTTACTCGATAA CCAACGTCTGCAATCGCAACTTG ATCTCA CCAGTTGCGTTTGCTGTTGTTAG TTTTGTTGTTTAATT TERM 1572 1200046 - 1200083 + G 79 -8.4 -4.0219 | opp_overlap 1200043 1200039, overlap 1200039 1200048 CTCGATAACCAACGT CTGCAATCGCAACTTG ATCTCA CCAGTTGCGTTTGCTG TTGTTAGTTTTGTTG TERM 1573 1200048 - 1200081 + G 77 -9.6 -3.57279 | opp_overlap 1200043 1200039, overlap 1200046 1200039 CGATAACCAACGTCT GCAATCGCAACTTG ATCTCA CCAGTTGCGTTTGC TGTTGTTAGTTTTGT PMI1130 1199975 - 1200103 + | hypothetical protein PMI1132 1201193 - 1201732 + | hypothetical protein TERM 1574 1201827 - 1201853 + F 90 -12.4 -3.00017 | opp_overlap 1201827, overlap 1201824 TGAATAACTGAATAA CTGAGTTCTGTA CTC TACAGGGCTCAG TCCTTTCAATTTAAC TERM 1575 1201853 - 1201827 - f 77 -8 -3.77953 | opp_overlap 1201827 1201824 TGAATAACTGAATAA CTGAGTTCTGTA CTC TACAGGGCTCAG TCCTTTCAATTTAAC PMI1135 1202583 - 1202900 + | hypothetical protein TERM 1576 1203149 - 1203138 - g 100 -4.4 -5.88197 | opp_overlap 1203138 GTAAAGATAAAAAAA CCTT GGAA AAGG TTAATAACGTTTTTT PMI1136 1202903 - 1203370 + | hypothetical protein TERM 1577 1203383 - 1203408 + F 91 -10.6 -4.0257 | TAATAAACATTTATA GCCAGAAAAT CCTTCA ATTTTCTGGC TTCTTCGTTTTTAAG PMI1139 1204565 - 1204933 + | hypothetical protein TERM 1578 1204939 - 1204965 + F 74 -6.8 -4.23007 | opp_overlap 1204939 TTTCAATTAATATAA GGATAATAAA GGTAATG TTTATTATCC TTTTGAAATTCTATA PMI1141 1205946 - 1206257 + | hypothetical protein TERM 1579 1208318 - 1208305 - g 70 -3.1 -4.89838 | GGAATAAACAGAAAA CACCT ATTG AAGTG TATCAATTTTTTTCT PMI1144 1208268 - 1208558 + | ribonuclease inhibitor PMI1145 1208895 - 1209212 + | hypothetical protein PMI1146 1209476 - 1209300 - | hypothetical protein PMI1147 1209647 - 1209832 + | hypothetical protein PMI1148 1209999 - 1210352 + | hypothetical protein TERM 1580 1210644 - 1210604 - T 79 -4.8 -5.28481 | opp_overlap 1210610, overlap 1210610 GATGTAATTAAAAAA TTATAATAGCCCTTGCTA TAAAT TAGCAAAGGCTATTTTTT TGTTTATAAGATAAA TERM 1581 1210610 - 1210638 + T 100 -10.4 -6.02919 | opp_overlap 1210604 1210610 ATTAAAAAATTATAA TAGCCCTTGCTA TAAAT TAGCAAAGGCTA TTTTTTTGTTTATAA TERM 1582 1210638 - 1210610 - T 100 -12.6 -3.82478 | opp_overlap 1210610, overlap 1210604 ATTAAAAAATTATAA TAGCCCTTGCTA TAAAT TAGCAAAGGCTA TTTTTTTGTTTATAA znuB 1211455 - 1210670 - | high-affinity zinc uptake system membrane protein znuC 1212173 - 1211448 - | high-affinity zinc uptake system ATP-binding protein TERM 1583 1212226 - 1212193 - H 74 -8.5 -3.31792 | gap 1, opp_overlap 1212203, overlap 1212202 1212215 TTAGCACTTGCAGAA TCATT-GAAACGTTAT AAT ATAACATTTCCAATGA CGTTTCACGAGAATT znuA 1212248 - 1213192 + | high-affinity zinc uptake system substrate-binding protein TERM 1584 1213676 - 1213692 + G 71 -9.5 -2.89797 | overlap 1213684 1213685 GAGTTAAGTTGGGGC GTTTCTC GCC GAGAAAC TCGTGTTTATACGCG PMI1153 1213205 - 1214533 + | peptidase TERM 1585 1214557 - 1214588 + F 100 -11.8 -4.45077 | opp_overlap 1214562 1214563, overlap 1214563 AAGAAGTTAAAGACA TAAAAGCGGATGAT TGAT ATCATCCGTTTTTG TTTTAATGATTTTTA TERM 1586 1214583 - 1214562 - f 86 -7.3 -4.74013 | opp_overlap 1214557 1214563, overlap 1214563 GTTAAAGACATAAAA GCGGATGAT TGAT ATCATCCGT TTTTGTTTTAATGAT TERM 1587 1214563 - 1214582 + F 100 -10.8 -5.50723 | opp_overlap 1214562 1214563, overlap 1214557 TTAAAGACATAAAAG CGGATGAT TGAT ATCATCCG TTTTTGTTTTAATGA TERM 1588 1214582 - 1214563 - f 87 -10.8 -3.43323 | opp_overlap 1214563 1214557, overlap 1214562 TTAAAGACATAAAAG CGGATGAT TGAT ATCATCCG TTTTTGTTTTAATGA msbB 1214640 - 1215614 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1589 1215650 - 1215671 + T 100 -11.6 -4.09285 | opp_overlap 1215650, overlap 1215643 AGGAAGATAAAAAAA CGGGCACT ATTTAA AGTGCCCG TTTGCTATTTTGCTA TERM 1590 1215671 - 1215650 - T 100 -11.6 -5.82172 | opp_overlap 1215650 1215643 AGGAAGATAAAAAAA CGGGCACT ATTTAA AGTGCCCG TTTGCTATTTTGCTA pykA 1217146 - 1215704 - | pyruvate kinase II TERM 1591 1216162 - 1216182 + g 70 -9.7 -2.60813 | overlap 1216161 1216164 TTGCGGCTACAGTTT CAGCGGGAT ATT GTCCTGCTG CTGTTTCAGCCGATA hexR 1218219 - 1217377 - | hex regulon repressor (RpiR-family transcriptional regulator) TERM 1592 1218235 - 1218247 + H 73 -7.7 -3.64703 | TAAATATACAGATCC TTGGC TTT GCCAA TTTCAATAAAAGGAG TERM 1593 1218323 - 1218337 + H 80 -5.6 -5.14965 | overlap 1218325 CTTACATCGCTGACA GCCCCT TAA AAGGGC TTTTTTCATCAAAGT TERM 1594 1219793 - 1219805 + G 71 -6.3 -4.26076 | opp_overlap 1219793 CTAAATTAGACTTAA GTTTC TCC GAAAC TTTTAATCAAACTCA zwf 1218574 - 1220049 + | glucose-6-phosphate 1-dehydrogenase TERM 1595 1220092 - 1220123 + F 87 -4.4 -5.7946 | AACTAATATAAATAA CACCGTAAAATAAG AGGT CGAGTTTTGCGGTG TTTTTTTATTAAGCA TERM 1596 1220978 - 1220953 - g 72 -3.3 -5.1675 | opp_overlap 1220953, overlap 1220972 TCAGGCACTAAAAAA TCGGTGGTT GCTAAAAA AACAACCGA TTCGGTAAAAAATAT TERM 1597 1220986 - 1220972 - g 76 -2 -5.40072 | opp_overlap 1220953, overlap 1220953 TGGTTGCTAAAAAAA CAACCG ATT CGGTAA AAAATATTGCCGGAA mdtJ 1220632 - 1221072 + | multidrug resistance protein mdtI 1221074 - 1221406 + | multidrug resistance protein TERM 1598 1221470 - 1221448 - f 100 -9.3 -5.69793 | opp_overlap 1221448 ATATTAAATAAAAAA GCTAAGTTT CTTGT AAACTTAGC TTTTTTGTTTCTATA TERM 1599 1221448 - 1221470 + F 100 -9.3 -5.76237 | opp_overlap 1221448 ATATTAAATAAAAAA GCTAAGTTT CTTGT AAACTTAGC TTTTTTGTTTCTATA PMI1160 1221564 - 1221695 + | hypothetical protein TERM 1600 1222242 - 1222217 - g 82 -4.1 -5.45652 | ATGGCGAACAAAAAA TAAATCCTATC TCTG GAAAAGATTTA GCGCAATTTATTGTC PMI1161 1221697 - 1222560 + | hypothetical protein TERM 1601 1222581 - 1222558 - T 100 -11 -4.77867 | ACATATAAGAGAAAA TAGTACCCGC ATGT GCGGGTGCTA ATAAAAAATTAGAGA PMI1162 1222934 - 1222590 - | endoribonuclease TERM 1602 1223063 - 1223049 - g 70 -5.6 -4.37886 | CGATTTTGCAGAAAA CGGGAT TTT AACCCG ACGCGTTCCTGGATT TERM 1603 1223601 - 1223623 + G 70 -3.4 -4.83615 | overlap 1223594 1223602 TGCGTTAGCCGCTGA TGTGGTGGTT GTT AATCATCACC TTTTTATGGCAGATA PMI1163 1223020 - 1224957 + | ATP-dependent helicase TERM 1604 1225185 - 1225169 - g 82 -3.7 -5.46276 | AACATACACAAAAAA TTTTACC AAT GGTGAAA AGTGCTTTAGAAGAA rpf 1225051 - 1225752 + | resuscitation-promoting factor (glycoprotease) PMI1165 1225843 - 1226436 + | lipoprotein TERM 1605 1226600 - 1226559 - f 100 -13.9 -3.30908 | opp_overlap 1226569, overlap 1226562 1226567 1226569 TATTAAAGATGAAGA CAACAAAAGAGAGGGCGGT TTTG ACCGCCTTCTTTTTTGTTA AACATAAAAAGAAAA TERM 1606 1226597 - 1226562 - f 100 -13.4 -3.77775 | opp_overlap 1226569, overlap 1226559 1226567 1226569 TAAAGATGAAGACAA CAAAAGAGAGGGCGGT TTTG ACCGCCTTCTTTTTTG TTAAACATAAAAAGA TERM 1607 1226592 - 1226567 - f 87 -7.5 -4.91285 | opp_overlap 1226569, overlap 1226562 1226559 1226569 ATGAAGACAACAAAA GAGAGGGCGGT TTTG ACCGCCTTCTT TTTTGTTAAACATAA TERM 1608 1226569 - 1226590 + F 100 -12.3 -5.45652 | opp_overlap 1226567 1226562 1226559 1226569 GAAGACAACAAAAGA GAGGGCGGT TTTG ACCGCCTTC TTTTTTGTTAAACAT TERM 1609 1226590 - 1226569 - f 90 -10.1 -4.06203 | opp_overlap 1226569, overlap 1226567 1226562 1226559 GAAGACAACAAAAGA GAGGGCGGT TTTG ACCGCCTTC TTTTTTGTTAAACAT TERM 1610 1228419 - 1228401 - g 90 -7.5 -5.25906 | AGAAATGAAGAAAAA CAGTTGA AAACA TCAACTG GATCTTGATACAACA fadD 1226739 - 1228427 + | long-chain-fatty-acid-CoA ligase TERM 1611 1228474 - 1228455 - f 73 -9.2 -2.924 | opp_overlap 1228456 1228472, overlap 1228454 TAACCTTTGATAAAT TCGCCGGT TTAT ACCGGCGT TTTTGTCTTTACGAA TERM 1612 1228456 - 1228473 + F 100 -12.7 -5.19879 | opp_overlap 1228455 1228454, overlap 1228472 AACCTTTGATAAATT CGCCGGT TTAT ACCGGCG TTTTTGTCTTTACGA TERM 1613 1228855 - 1228866 + G 70 -5.8 -4.37211 | TCGTGGCCGCTTTTC TGGG CTAT CCCA TTTCTTGTGGCTTTG TERM 1614 1229452 - 1229442 - g 79 -3.2 -5.37345 | CCTAACTATAAAAAA GCCT TTA AAGC AATAAAAACGGTGAT TERM 1615 1229574 - 1229563 - g 75 -5.8 -4.67641 | opp_overlap 1229562 ACTGGAAAATTAAAA CAGG GGAG CCTG AATTGCTTTCACGCT rnd 1228527 - 1229645 + | ribonuclease D TERM 1616 1229661 - 1229693 + T 79 -7.1 -4.36914 | opp_overlap 1229662, overlap 1229662 TATCACGTTATATTA ATTCAGGCTAAAGAG TAA TTATTTAGCCTGAAA TTTTCTCAAACCCAA TERM 1617 1229662 - 1229692 + T 83 -10.6 -3.21934 | opp_overlap 1229662, overlap 1229661 ATCACGTTATATTAA TTCAGGCTAAAGAG TAA TTATTTAGCCTGAA ATTTTCTCAAACCCA TERM 1618 1229692 - 1229662 - T 82 -9.9 -3.272 | opp_overlap 1229662 1229661 ATCACGTTATATTAA TTCAGGCTAAAGA GTAAT TATTTAGCCTGAA ATTTTCTCAAACCCA minE 1230188 - 1229919 - | cell division topological specificity factor minD 1231004 - 1230192 - | septum site-determining protein minC 1231728 - 1231027 - | septum site-determining protein TERM 1619 1232059 - 1232039 - g 76 -4.7 -5.07275 | GCAGACATAGAAAAA GTCAAACAA GCG TTGACTGAC CAAGGTTTTTATCTA PMI1171 1231856 - 1232149 + | hypothetical protein TERM 1620 1232146 - 1232131 - f 72 -3.3 -5.31059 | AGATGAATTAAAAAA TTCAG AAAAAA CTGAA TAAATCATCGAGATA TERM 1621 1232274 - 1232264 - g 90 -3.2 -5.94713 | AGTGCAGAAAAAAAA CCTG TAA CAAG TGAAATTGCCAATAT PMI1172 1232174 - 1233301 + | lipoprotein PMI1173 1233355 - 1234011 + | fumarylacetoacetate hydrolase PMI1174 1234045 - 1234488 + | hypothetical protein TERM 1622 1234489 - 1234530 + T 100 -16.1 -4.78572 | gap 1, opp_overlap 1234491, overlap 1234492 1234495 AAAGGACGCGGTTAA TATTGCGCTCTCCCTTTGTG TTA CACAGAGGGAGAGC-CATTA TTTTATTGATTAAAC TERM 1623 1234528 - 1234491 - T 89 -12.1 -3.0263 | gap 1, opp_overlap 1234489 1234492 1234495 AGGACGCGGTTAATA TTGCGCTCTCCCTTTGTG TTA CACAGAGGGAGAGC-CAT TATTTTATTGATTAA TERM 1624 1234492 - 1234527 + T 100 -17.8 -4.48997 | gap 1, opp_overlap 1234491, overlap 1234489 1234495 GGACGCGGTTAATAT TGCGCTCTCCCTTTGTG TTA CACAGAGGGAGAGC-CA TTATTTTATTGATTA TERM 1625 1234495 - 1234525 + T 100 -20.6 -2.55036 | opp_overlap 1234491, overlap 1234492 1234489 CGCGGTTAATATTGC GCTCTCCCTTTGTG TTA CACAGAGGGAGAGC CATTATTTTATTGAT PMI1175 1235303 - 1234533 - | hypothetical protein TERM 1626 1234821 - 1234803 - G 70 -9.6 -2.62371 | overlap 1234802 AGCCATTGAAGCAAT TTTAGGGG TTG CCCCCAAA CTTAACATTTCTTGG PMI1176 1236019 - 1235369 - | ABC transporter, ATP-binding protein PMI1177 1237234 - 1236311 - | hypothetical protein PMI1178 1238267 - 1237353 - | AraC-family transcriptional regulator TERM 1627 1237690 - 1237701 + g 70 -3 -5.07275 | opp_overlap 1237690, overlap 1237697 GAAATTAACACACTA CTTT CCGT AAAG TTTTTATCTGTGTAC PMI1179 1238341 - 1238985 + | TetR-family transcriptional regulator TERM 1628 1239004 - 1238987 - f 79 -8.5 -3.9226 | AACATAGGGTATAAA GAGGTAT TAAA ATACCTC TAAGCATTGTGCAAA TERM 1629 1239576 - 1239607 + F 100 -14.7 -2.75528 | opp_overlap 1239579, overlap 1239579 TTTGTTAACACTAGG GAATGCACTCTTT TTTACT AAAGAGTGCATTC TGATATCTTACAAAT TERM 1630 1239579 - 1239604 + F 85 -10.6 -3.52475 | opp_overlap 1239579, overlap 1239576 GTTAACACTAGGGAA TGCACTCTTT TTTACT AAAGAGTGCA TTCTGATATCTTACA TERM 1631 1239604 - 1239579 - f 83 -10.6 -3.13432 | opp_overlap 1239576 1239579 GTTAACACTAGGGAA TGCACTCTTT TTTACT AAAGAGTGCA TTCTGATATCTTACA TERM 1632 1240139 - 1240116 - g 76 -4.6 -5.08824 | gap 1, overlap 1240118 1240120 CTGCTAGTCAAAAAA TGGATGAACTC AAC GAGATCA-CCA TGACATATTATGCCG TERM 1633 1240423 - 1240413 - g 71 -4 -4.85545 | opp_overlap 1240413 ATGAAATGAATAAAA TGAA AGT TTCA TTAAGTCAAATGATT PMI1180 1239665 - 1241218 + | methyl-accepting chemotaxis protein TERM 1634 1241339 - 1241297 - T 80 -9.4 -3.49169 | gap 1, opp_overlap 1241302, overlap 1241302 CCAAGACGAATAAGA TAAAACCCCT-TTAGCCAC TCAAAG GTGACTAACAGGGGTTTTT TAGAGACTTAGGCTT TERM 1635 1241302 - 1241334 + T 89 -7.8 -5.03145 | gap 1, opp_overlap 1241302 1241297 ACGAATAAGATAAAA CCCCT-TTAGCCACT CAAA GGTGACTAACAGGGG TTTTTTAGAGACTTA TERM 1636 1241334 - 1241302 - T 93 -9.3 -4.80656 | gap 1, opp_overlap 1241302, overlap 1241297 ACGAATAAGATAAAA CCCCT-TTAGCCAC TCAAAG GTGACTAACAGGGG TTTTTTAGAGACTTA ldhA 1242345 - 1241347 - | D-lactate dehydrogenase TERM 1637 1242207 - 1242217 + g 73 -2.4 -5.34055 | overlap 1242213 TACAGACTGCATCTG CGCC GAC GGCA TTTTTTGCTGTTTGT TERM 1638 1245037 - 1245009 - g 76 -7.5 -4.20368 | overlap 1245010 CCATTGGAAGACAAA CGGCGACAAGTAA ATC TTAATTATCGCCA TCAAGAAAATATTTT PMI1182 1242504 - 1245140 + | hypothetical protein PMI1183 1245140 - 1245343 + | lipoprotein PMI1184 1245358 - 1245690 + | hypothetical protein TERM 1639 1245703 - 1245669 - T 73 -8 -3.5013 | overlap 1245691 1245694 TGTTAAAGGAATTAA TGGGCAGTGGAT TAAGAAATAAT ATCCACTACCCA AGTAGCGATAAAAGA PMI1185 1246353 - 1245769 - | fimbrial subunit PMI1186 1248809 - 1246395 - | outer membrane fimbrial usher protein TERM 1640 1246421 - 1246431 + g 70 -2.6 -5.05577 | AAATTTGTTTCTTAA TAAT TGA ATTA TTTTTACTTTCATTT TERM 1641 1246791 - 1246809 + g 71 -7.5 -3.94067 | ATATGGCATGATGTG CGGTAAT ATTAA ATTACCG TTATTGTCTGTAATG PMI1187 1249503 - 1248802 - | fimbrial chaperone TERM 1642 1249583 - 1249555 - R 77 -7.5 -3.99228 | opp_overlap 1249555 1249561, overlap 1249561 ATATTAATCCATAAA TAAAAAGCCGG TATTTCC CCGGCTTTATA TTGGGTTAAAAATTA TERM 1643 1249577 - 1249561 - R 88 -6.5 -5.38958 | opp_overlap 1249561 1249555, overlap 1249555 ATCCATAAATAAAAA GCCGG TATTTCC CCGGC TTTATATTGGGTTAA TERM 1644 1249561 - 1249577 + r 70 -6.5 -4.23794 | opp_overlap 1249555 1249561, overlap 1249555 ATCCATAAATAAAAA GCCGG TATTTCC CCGGC TTTATATTGGGTTAA PMI1188 1250174 - 1249629 - | fimbrial subunit TERM 1645 1250464 - 1250442 - R 89 -8.5 -4.58085 | opp_overlap 1250442, overlap 1250428 1250444 ATATTTATAAATAAA TAGCACCTT GATTA AAGGTGCCA TTAGATATATTTTTA TERM 1646 1250462 - 1250444 - R 81 -8.9 -3.89305 | opp_overlap 1250442, overlap 1250442 ATTTATAAATAAATA GCACCTT GATTA AAGGTGC CATTAGATATATTTT TERM 1647 1251012 - 1250984 - R 79 -8.3 -3.98826 | opp_overlap 1250984, overlap 1250990 GTATTAACCTATAAA TAAAAAGCCGG TATTTCC CCGACTTTTTA TTGGGTTGAAAATTA TERM 1648 1251006 - 1250990 - R 74 -2.9 -5.38958 | opp_overlap 1250984, overlap 1250984 ACCTATAAATAAAAA GCCGG TATTTCC CCGAC TTTTTATTGGGTTGA PMI1190 1251612 - 1251058 - | fimbrial subunit TERM 1649 1251889 - 1251867 - R 89 -8.5 -4.58085 | opp_overlap 1251867, overlap 1251853 1251869 ATATTTATAAATAAA TAGCACCTT AGTTA AAGGTGCCA TTAGATATATTTTTA TERM 1650 1251887 - 1251869 - R 81 -8.9 -3.89305 | opp_overlap 1251867, overlap 1251867 ATTTATAAATAAATA GCACCTT AGTTA AAGGTGC CATTAGATATATTTT acpD 1252522 - 1251902 - | acyl carrier protein phosphodiesterase TERM 1651 1252601 - 1252619 + H 82 -7.6 -4.38203 | TTCACACCATAATCG TTTGAATA TGC TATTCAAA TTTATTGATTATATA TERM 1652 1253958 - 1253978 + G 79 -5.5 -4.88918 | TGATGGTATTTGTAT TCGTCTTTA TTC TGAAGATGA TTTTATTTCCCGTGC TERM 1653 1254748 - 1254724 - g 79 -4.9 -5.08824 | GGGTTATTTAAAAAA CCGCCAAAATG GAC CATGGTGGCAG AATTAGTCGAAACAT TERM 1654 1254878 - 1254868 - g 71 -6.8 -4.09685 | overlap 1254869 CCTCATTGGTCAAAA GCAC AGG GTGC GGTAATGGCTAATGA TERM 1655 1255692 - 1255679 - g 70 -3.1 -4.95547 | overlap 1255680 GTGACAACAATAAAA CCCTT GCGG AAGGA AAAGATCTTAATCAG hrpA 1252744 - 1256640 + | ATP-dependent helicase TERM 1656 1256651 - 1256688 + T 100 -15.1 -2.87548 | opp_overlap 1256651 1256655, overlap 1256655 GTTAAAGCTGATAGA TAAACCCACAATGGTGA GTTA TGGCCATTGTGGGTTTA TATACTACTATTATT TERM 1657 1256688 - 1256651 - T 100 -13 -2.9348 | opp_overlap 1256651 1256655, overlap 1256655 GTTAAAGCTGATAGA TAAACCCACAATGG TGAGTTATGG CCATTGTGGGTTTA TATACTACTATTATT TERM 1658 1256655 - 1256684 + T 100 -11.5 -4.10566 | opp_overlap 1256655 1256651, overlap 1256651 AAGCTGATAGATAAA CCCACAATGGTGA GTTA TGGCCATTGTGGG TTTATATACTACTAT TERM 1659 1256684 - 1256655 - T 86 -9.4 -4.13648 | opp_overlap 1256651 1256655, overlap 1256651 AAGCTGATAGATAAA CCCACAATGG TGAGTTATGG CCATTGTGGG TTTATATACTACTAT PMI1193 1257016 - 1256699 - | hypothetical protein PMI1194 1258033 - 1257029 - | fimbrial subunit PMI1195 1260436 - 1258043 - | outer membrane fimbrial usher protein TERM 1660 1258900 - 1258933 + g 78 -2.5 -5.42265 | overlap 1258904 TATTGCTATACTGAT CTTTGCTATTCTCTA GCTC TAATGAATAGGAAAG TTTTTTATAATTTGA TERM 1661 1259145 - 1259164 + g 84 -8 -4.81685 | TTTAATGAAATAGTT GTATTTTC CATA GAAAATAC TTTTTGGTAATTAAT PMI1196 1261119 - 1260445 - | fimbrial chaparone TERM 1662 1260613 - 1260603 - G 75 -2.6 -5.31275 | CCCCATTAGAAAAAA TATT TAT AATA GTGAAGTAGTATTCA TERM 1663 1261113 - 1261101 - G 72 -3.5 -5.02323 | opp_overlap 1261101, overlap 1261096 TTATGATAAATAAAA TATAA ACA TTATA CTTCATAATAAAATA PMI1197 1261713 - 1261147 - | fimbrial subunit TERM 1664 1261785 - 1261841 + r 74 -9.2 -3.10967 | opp_overlap 1261785 1261787 1261788 1261803, overlap 1261784 1261788 ACGGAGTGGATAATA TAGTTTTCTAACAAAAAGTAAATAAA GTGTA TTTATCTGCTTTTTGTTGGAAAATCA GTTTATCTGTCTGTA TERM 1665 1261838 - 1261788 - R 82 -10.9 -2.5055 | opp_overlap 1261785 1261784 1261788, overlap 1261787 1261785 1261803 GAGTGGATAATATAG TTTTCTAACAAAAAGTAAATAAA GTGTA TTTATCTGCTTTTTGTTGGAAAA TCAGTTTATCTGTCT TERM 1666 1261788 - 1261838 + r 100 -13.1 -2.75389 | opp_overlap 1261788 1261787 1261785 1261803, overlap 1261785 1261784 GAGTGGATAATATAG TTTTCTAACAAAAAGTAAATAAA GTGTA TTTATCTGCTTTTTGTTGGAAAA TCAGTTTATCTGTCT ydgI 1263596 - 1262202 - | arginine/ornithine antiporter TERM 1667 1263822 - 1263838 + r 85 -8 -4.56597 | opp_overlap 1263822 ACAAGTATAAAAAAA CCTTGC ATAGA GCAAGG TTTTTAAAAGAGAAA TERM 1668 1263838 - 1263822 - R 100 -8 -5.73339 | opp_overlap 1263822 ACAAGTATAAAAAAA CCTTGC ATAGA GCAAGG TTTTTAAAAGAGAAA PMI1199 1264818 - 1263865 - | hypothetical protein TERM 1669 1264040 - 1264050 + g 73 -6.8 -4.20749 | opp_overlap 1264039 AAAGGTTCCATTAAT GCAG CCG CTGC TTTATTAACCTCTTG pntA 1265206 - 1266735 + | NAD(P) transhydrogenase subunit alpha (pyridine nucleotide transhydrogenase subunit alpha) pntB 1266747 - 1268135 + | NAD(P) transhydrogenase subunit beta (pyridine nucleotide transhydrogenase subunit beta) TERM 1670 1268161 - 1268198 + T 74 -8.6 -3.3676 | gap 1, opp_overlap 1268166, overlap 1268166 TAATAATCTTTAATA AAAAACGCCCGACTATT TAAGT GATAG-CGGGCGTTTTG TTATACAGTATTAAA TERM 1671 1268193 - 1268166 - T 100 -7.8 -5.45652 | gap 1, opp_overlap 1268161 1268166 ATCTTTAATAAAAAA CGCCCGACTAT TTAAGTG ATAG-CGGGCG TTTTGTTATACAGTA TERM 1672 1268166 - 1268193 + T 93 -8.5 -4.78237 | gap 1, opp_overlap 1268166, overlap 1268161 ATCTTTAATAAAAAA CGCCCGACTATT TAAGT GATAG-CGGGCG TTTTGTTATACAGTA uspE 1269168 - 1268218 - | universal stress protein E TERM 1673 1269113 - 1269096 - G 71 -7 -4.1347 | opp_overlap 1269095 1269096 1269098 GCTGAACGATATAAA CAGCAC GACGTA GTGCTG GTTGGTCATCTTGGT TERM 1674 1269280 - 1269257 - R 100 -10.3 -4.94487 | opp_overlap 1269257 GCACAAAATAGAAAA CGGGACACA AATTTG TGTGCCCCG TTATAAAAATAGGTG TERM 1675 1269257 - 1269280 + r 71 -8.1 -3.31461 | opp_overlap 1269257 GCACAAAATAGAAAA CGGGACACA AATTTG TGTGCCCCG TTATAAAAATAGGTG fnr 1270069 - 1269311 - | fumarate and nitrate reduction regulatory protein TERM 1676 1271866 - 1271853 - g 74 -3.7 -5.01732 | AATGTGGGTAAAAAA GGCGC TTGG GCGGC TGGATATGGCGGAAT PMI1204 1270635 - 1273031 + | dimethyl sulfoxide reductase chain A precursor TERM 1677 1273307 - 1273294 - g 72 -3.1 -5.04385 | TATATGTGTAAAAAA CTGTC CAAC AACAG CAATGCATAAACGCC PMI1205 1273028 - 1273657 + | anaerobic dimethyl sulfoxide reductase chain B PMI1206 1273654 - 1274526 + | anaerobic dimethyl sulfoxide reductase chain C TERM 1678 1274632 - 1274671 + G 71 -5.1 -4.55826 | gap 1 TCAAACAAAGCCTTT GTGATAGCTGTTCAAAAG TCTGT CCTGTGGAC-GCTATCAC TTTTAGTCTTTTGAA PMI1207 1274547 - 1275431 + | ferredoxin PMI1208 1275562 - 1276587 + | probable zinc-binding dehydrogenase TERM 1679 1276685 - 1276664 - f 95 -8.9 -5.03715 | opp_overlap 1276664 ATTATTCTGAAAAAA CACATAATA AAGA TATTATGTG TTTTTTTATTCTCTA TERM 1680 1276664 - 1276685 + F 100 -8.9 -5.9218 | opp_overlap 1276664 ATTATTCTGAAAAAA CACATAATA AAGA TATTATGTG TTTTTTTATTCTCTA disA 1277098 - 1278933 + | tyrosine decarboxylase TERM 1681 1278969 - 1278992 + F 84 -5.4 -5.37593 | opp_overlap 1278969 TTTAACATAGTAAAA GTTAGCAA GGAAAAGG TTGCTAAC TTTTTTAGTTTACCC TERM 1682 1279028 - 1279016 - f 82 -7.7 -4.38712 | TTTACCCTTATAAAA GTGAC GCT GTCAC TAAAGTTACTCCTTC TERM 1683 1279885 - 1279875 - g 88 -2.6 -5.90231 | AGAAACAGAAAAAAA TATT CAA AATA AACTGGCTTATGCAC PMI1210 1279291 - 1280106 + | PadR-family transcriptional regulator PMI1211 1280099 - 1280254 + | hypothetical protein TERM 1684 1280263 - 1280295 + F 72 -8.6 -3.06991 | overlap 1280262 1280265 ACTATGATAATGCTA GACAGAGGCTAT CCATATGCT ATAGCTTCTGTC GTTTTGAGCATGCTG TERM 1685 1280437 - 1280450 + F 83 -4.5 -5.66229 | TTTTTATTATAAGTT GTGAG ACTC CTCGC TTTTTTATTCTTAGT PMI1212 1280536 - 1281243 + | hypothetical protein ahpC 1281536 - 1282099 + | alkyl hydroperoxide reductase subunit C TERM 1686 1282153 - 1282172 + F 93 -10 -4.64676 | TAACGTAGTTATTTA TCGGGTGT TTCG GCACCCGA TTTTATTGAGGGTGC TERM 1687 1283159 - 1283135 - g 77 -6.4 -4.62069 | GTGCGATTTTAAAAA CCCGTAGC TTAATTATT GCCACGGG TGCTCGCTGGAGAAA TERM 1688 1283210 - 1283196 - g 79 -8.6 -4.08767 | CGTACCGGGTGAAAA CGAGTA CCG TACTCG CGGTGTAACATACTG ahpF 1282192 - 1283757 + | alkyl hydroperoxide reductase subunit F TERM 1689 1283784 - 1283819 + F 86 -11.4 -2.90212 | opp_overlap 1283792, overlap 1283792 ATAATCAATAAGTTA TAGAGAAAGGCATCTT TTTT AAGATGCCTTTTTTTG TATATAAAATCATCA TERM 1690 1283792 - 1283811 + F 100 -10.8 -5.76633 | opp_overlap 1283792, overlap 1283784 TAAGTTATAGAGAAA GGCATCTT TTTT AAGATGCC TTTTTTTGTATATAA TERM 1691 1283811 - 1283792 - f 93 -10.8 -4.15061 | opp_overlap 1283792 1283784 TAAGTTATAGAGAAA GGCATCTT TTTT AAGATGCC TTTTTTTGTATATAA PMI1215 1284070 - 1285062 + | hypothetical protein TERM 1692 1285110 - 1285080 - f 85 -6.9 -5.093 | opp_overlap 1285075 1285073 1285080, overlap 1285082 TTTAAAATAATAAAA CTGCTCTATTATC AATTA GATAAAAGAGCGG TAGTATCTATTTTGA TERM 1693 1285080 - 1285110 + F 73 -9.1 -2.80859 | opp_overlap 1285080 1285082, overlap 1285075 1285073 TTTAAAATAATAAAA CTGCTCTATTATC AATTA GATAAAAGAGCGG TAGTATCTATTTTGA PMI1216 1285324 - 1285806 + | hypothetical protein TERM 1694 1285824 - 1285863 + F 71 -8.1 -3.3197 | opp_overlap 1285823 1285826 AACTAATAAGTGAAT TATCCTAAGTGTATC AGGCGTAATG GATACACTTAGGACA TTATAAAAATAATAT TERM 1695 1285861 - 1285826 - f 81 -10.7 -2.81969 | opp_overlap 1285824, overlap 1285823 CTAATAAGTGAATTA TCCTAAGTGTATC AGGCGTAATG GATACACTTAGGA CATTATAAAAATAAT TERM 1696 1286204 - 1286220 + G 83 -7.3 -4.74103 | opp_overlap 1286204 1286203 TTTAGATCTTAAAAC TGGCTTT GCT GAAGCCA TTTTTACATTACCGG PMI1217 1285965 - 1286447 + | acetyltransferase TERM 1697 1286685 - 1286695 + G 70 -8.2 -3.63744 | overlap 1286683 TTATTTGCGTTAATT GCGC TAG GCGC TATTTTAAGAAGAAA TERM 1698 1286900 - 1286917 + G 73 -6.9 -4.2717 | opp_overlap 1286900 TTTTAAAAAAATAAC CGGCTGG TCTG CTGGCCG TTTTGGTGCGATCGT PMI1218 1286640 - 1287548 + | efflux protein TERM 1699 1287792 - 1287779 - g 76 -3.1 -5.18371 | TGGGATAAAATAAAA GACTG GTTC CAATC AAACAAAAGAGAAAA TERM 1700 1288826 - 1288814 - g 76 -3.5 -5.34655 | overlap 1288802 GAATTAAAAATAAAA TTTTT TAA AAAAA GTAGCGATAAAATAA PMI1219 1287671 - 1289131 + | hypothetical protein TERM 1701 1290340 - 1290356 + G 82 -8.1 -4.57073 | opp_overlap 1290339 GTGACAACAGATGAT CGTAATT GGG AATTACG TTTTTCAGCAACATC amn 1289203 - 1290654 + | AMP nucleosidase TERM 1702 1290687 - 1290718 + T 85 -8.3 -4.64766 | gap 1, opp_overlap 1290684 1290687 1290691 TAAGATGAAAATTTA TATACCCAATATCA TTGAT TGA-ATTGGGTATA TTTTTACAATATAAA PMI1221 1291729 - 1290737 - | integrase/recombinase TERM 1703 1291805 - 1291788 - R 72 -3.5 -5.15381 | overlap 1291799 AACAGATCTAAAAAA GAAAAAA GCTA CTTTTTC AAAGGATCATTTTAA PMI1222 1293074 - 1292037 - | exported L-asparaginase TERM 1704 1293832 - 1293857 + G 70 -2.7 -5.14563 | gap 1, overlap 1293833 1293834 TGTTTACGGCATTAT TAT-TGTTGCAA TTA TTGCAGCAGGTA TTTTTTGGTGGAAAA PMI1223 1293788 - 1294861 + | HlyD-family secretion protein TERM 1705 1296230 - 1296242 + G 77 -7.7 -4.14422 | opp_overlap 1296229 TTGATCTCTCAAGAC GTGAC GGT GTCAC TATTTTTATCTCTAC TERM 1706 1297127 - 1297117 - g 79 -6.8 -4.62069 | opp_overlap 1297115 1297117 GTGGTACGTGAAAAA GAGC TAG GCTC TATTATTAATTTATA PMI1224 1294858 - 1297626 + | ABC-type multidrug transport system PMI1225 1297627 - 1298754 + | ABC-2 type transporter kdpE 1299465 - 1298782 - | two-component response regulator of kdp operon kdpD 1302164 - 1299462 - | two-component sensor kinase TERM 1707 1300973 - 1300990 + g 80 -2.1 -5.54907 | gap 1, overlap 1300976 1300985 TTTGGCGCCATTTAT CATTTTGT GGC ACAAA-TG TTTTTGTTTTATAAC TERM 1708 1301169 - 1301180 + g 83 -7.2 -4.68506 | ATGCTCTCTGGCATA GCGG ATCA CCGC TTTTTCCGCTTGATT TERM 1709 1302060 - 1302038 - G 82 -12 -3.01924 | GAGCTTCTTGTAACA TGGCGTAGGT TTT ACCTACGCCG GCACAGGCACCAAAA TERM 1710 1302664 - 1302679 + H 83 -6.8 -4.89852 | opp_overlap 1302664 AAATAACTGAGGAAA CGGCTG ATAA TAGCCG TTTTTATGCCTATGC TERM 1711 1302797 - 1302826 + G 72 -4.3 -4.73828 | AATATGGTGCGGCTT TTATGCCTTCACT AATT GGTGGAGGAATGA TTGTTTTTTCATTAT PMI1229 1302685 - 1303119 + | hypothetical protein PMI1230 1303138 - 1304625 + | hypothetical protein TERM 1712 1305727 - 1305739 + G 75 -7.7 -4.10657 | TTTATTGAATGCACC TGCAC ACT GTGCA TTTTGGAGAGTGTGA dhaK1 1304759 - 1305754 + | dihydroxyacetone kinase (glycerone kinase), kinase subunit TERM 1713 1306244 - 1306232 - g 71 -4.9 -4.57569 | CCACCGCTTTAAAAA GTATT AAT AATAC GCTAAATGAATTTCG dhaK2 1305754 - 1306365 + | dihydroxyacetone kinase, phosphatase subunit TERM 1714 1307274 - 1307284 + G 72 -4.6 -4.77896 | opp_overlap 1307271 CAATTATGCAAAGAA GCGG GGA TCGC TTTTTCAATTAATTA PMI1233 1306389 - 1307300 + | dihydrodipicolinate synthase TERM 1715 1307337 - 1307362 + T 72 -3.4 -5.31877 | opp_overlap 1307337 TCTTTATTATATTAA GCAGTATA AAAAACAAGC TATACTGC TTTTTTATAATAAAT PMI1234 1308366 - 1307395 - | pyridoxal-phosphate dependent TERM 1716 1308217 - 1308206 - G 78 -7.2 -4.35524 | opp_overlap 1308193 CCGCGAAATTTAAAA GCGC CTAT GCGC TGAAAGTTTTCGCAT PMI1235 1308761 - 1308363 - | endoribonuclease TERM 1717 1309035 - 1309062 + r 77 -9.3 -3.32765 | opp_overlap 1309035 1309038, overlap 1309038 TTTTAAAGGTTGAAA GAAGGTTCAAT AACTTG ATTGAGCCTTC TTAATGTATGCGGTT TERM 1718 1309062 - 1309035 - R 70 -7.1 -3.63968 | opp_overlap 1309035 1309038, overlap 1309038 TTTTAAAGGTTGAAA GAAGGTTCAAT AACTTG ATTGAGCCTTC TTAATGTATGCGGTT PMI1236 1309834 - 1309076 - | acetyltransferase TERM 1719 1309942 - 1309930 - H 82 -7.7 -4.68384 | opp_overlap 1309938 ACTCACCTAATAAAA GTGAC AGT GTCAC CAATGTGTCTGTTGC TERM 1720 1310286 - 1310259 - H 78 -6.6 -4.5366 | opp_overlap 1310274, overlap 1310273 1310274 CTAAAAAATGCAAAA TTTATAAAAAAT AATT ATTTTTCATAAA GATATATAGTTATTT TERM 1721 1310326 - 1310314 - H 72 -2.7 -5.36441 | overlap 1310274 1310273 TTTCTATATAAAAAA TAGCT TAT AACTA TGACTCTCATCACAA PMI1237 1310674 - 1311321 + | transport protein TERM 1722 1311345 - 1311364 + F 100 -5.8 -5.93809 | gap 1, opp_overlap 1311345 TGAGATTGATGAAAA GGTCAC-AT TTT ATGGTGACC TTTTTTTTATACGAA PMI1238 1311426 - 1312043 + | pyridoxamine 5'-phosphate oxidase PMI1239 1312164 - 1312775 + | probable base excision DNA repair protein TERM 1723 1313524 - 1313513 - g 76 -4.4 -5.03747 | AAATTGCTCAAAAAA TTGG TTCG CCAA AATCTTATCGAGCAG ada 1312855 - 1313718 + | regulatory protein of adaptative response [contains: methylated-DNA--protein-cysteine methyltransferase] PMI1241 1313763 - 1314092 + | hypothetical protein TERM 1724 1314143 - 1314126 - T 100 -12.7 -4.78753 | opp_overlap 1314126 TTAATACCAATAAAA GCGGAGG GGTT CCTCCGC TTTGTATTATAACTT TERM 1725 1314126 - 1314143 + T 100 -12.7 -4.28791 | opp_overlap 1314126 TTAATACCAATAAAA GCGGAGG GGTT CCTCCGC TTTGTATTATAACTT PMI1242 1315929 - 1314187 - | ABC transporter ATP-binding protein TERM 1726 1314239 - 1314253 + g 71 -6.4 -4.25283 | overlap 1314224 TCTGCTTGCCATTGA GCCTGT AAT ATAGGC TTTTGATGAGCAGAT TERM 1727 1314668 - 1314651 - G 83 -6.3 -5.16841 | TGAGACCAATAAAAA GTAAACG AGCT CGTTCAC CACCACTTAATGACT TERM 1728 1315114 - 1315136 + g 86 -7.8 -4.92828 | TTCTGTTACATCGAC TTGTTCGTCT TTT AAACGAACAA TTTGTTTTTCCATTT ddlA 1316402 - 1317502 + | D-alanine:D-alanine ligase A TERM 1729 1317642 - 1317662 + G 73 -6.8 -4.30576 | opp_overlap 1317635 1317643 1317646, overlap 1317643 GATAATTACCTTTAA ACAAGGGC GTAAA GCCCTTGC TTTTGGTCATCAAAA TERM 1730 1317643 - 1317661 + G 75 -10.3 -3.18024 | opp_overlap 1317635 1317643 1317646, overlap 1317642 ATAATTACCTTTAAA CAAGGGC GTAAA GCCCTTG CTTTTGGTCATCAAA TERM 1731 1317661 - 1317643 - g 79 -10.3 -3.59583 | opp_overlap 1317642 1317643, overlap 1317635 1317646 ATAATTACCTTTAAA CAAGGGC GTAAA GCCCTTG CTTTTGGTCATCAAA PMI1244 1317538 - 1317921 + | hydrolase PMI1245 1318167 - 1318556 + | hypothetical protein TERM 1732 1319024 - 1319013 - g 70 -5.8 -4.32177 | TTATTTGATAATAAA GCTG AAAA CAGC AATATTAAAATCTCT PMI1246 1318746 - 1319267 + | hypothetical protein metQ 1319484 - 1320284 + | probable D-methionine-binding lipoprotein TERM 1733 1320630 - 1320615 - g 75 -5.4 -4.68103 | GTAAGTGGAAGAAAA CCCCTT CCAG AAGGAG AAAAAGCAGGTTTAG PMI1248 1320420 - 1321703 + | methionine gamma-lyase TERM 1734 1321756 - 1321718 - T 100 -16.4 -2.77537 | opp_overlap 1321723, overlap 1321723 ATGGATAAACAATAG CAAAACAACGGATTATAA GAT TTATAATCCGTTGTTTTT TTTGCTTTGCTGTTT TERM 1735 1321723 - 1321751 + T 100 -16.3 -6.02546 | opp_overlap 1321718 1321723 TAAACAATAGCAAAA CAACGGATTATAA GAT TTATAATCCGTTG TTTTTTTTGCTTTGC TERM 1736 1321751 - 1321723 - T 100 -16.3 -4.52347 | opp_overlap 1321723, overlap 1321718 TAAACAATAGCAAAA CAACGGATTATAA GAT TTATAATCCGTTG TTTTTTTTGCTTTGC PMI1249 1322318 - 1321773 - | acetyltransferase TERM 1737 1323229 - 1323217 - g 79 -4.8 -5.08255 | ATTCTTAAAATAAAA GCGT TATTG ACGC ACACTACGCTATCAG PMI1250 1322515 - 1323360 + | transcriptional regulator PMI1251 1324551 - 1323367 - | MFS-family transporter accA 1324814 - 1325776 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha PMI1253 1325849 - 1326736 + | LysR-family transcriptional regulator PMI1254 1328242 - 1326740 - | MFS-family transporter TERM 1738 1326828 - 1326816 - G 75 -5.5 -4.77983 | overlap 1326823 AACAGAGTAATAAAA CAGGA AAG CCCTG CGGTTAGCATGGCAT PMI1255 1328397 - 1328993 + | TetR-family transcriptional regulator TERM 1739 1330175 - 1330158 - g 85 -5.7 -5.32599 | opp_overlap 1330158 TATAAAAGATAAAAA TTCAAAA GAGT TTTTGAA TTTAATTAAAATCGA PMI1256 1329427 - 1330431 + | hypothetical protein PMI1257 1332162 - 1330564 - | ABC transporter ATP-binding protein PMI1258 1332413 - 1332868 + | hypothetical protein PMI1259 1332925 - 1334325 + | probable amidohydrolase TERM 1740 1334353 - 1334388 + T 100 -13.6 -4.16943 | opp_overlap 1334360, overlap 1334360 TAGCGTTAATAAGTT TATAAAAGGTGATTTG ATAT CAAATCACCTTTTTTA TTTTAAACTATCAGA TERM 1741 1334381 - 1334360 - T 100 -11.7 -4.44461 | opp_overlap 1334353 1334360 AATAAGTTTATAAAA GGTGATTTG ATAT CAAATCACC TTTTTTATTTTAAAC TERM 1742 1334360 - 1334381 + T 100 -11.7 -5.79595 | opp_overlap 1334360, overlap 1334353 AATAAGTTTATAAAA GGTGATTTG ATAT CAAATCACC TTTTTTATTTTAAAC PMI1260 1335370 - 1334399 - | LysR-family transcriptional regulator TERM 1743 1334970 - 1334956 - G 79 -8.6 -4.10178 | opp_overlap 1334955 1334956 CAATAATATTAGAAA GGGAAT TAT ATTCCC AATTTTTTATCTGAA PMI1261 1336547 - 1335363 - | MFS-family transporter TERM 1744 1336429 - 1336419 - G 70 -5.4 -4.45261 | CAAATAAATTGAAAA TGCA TGG TGCA ATGTCACTTCAGAAG TERM 1745 1336543 - 1336525 - G 100 -3.2 -6.21477 | AATACTAAAAAAAAA CTAAAAAT AAC ATATTTAG TCATAAACCACCTCG TERM 1746 1336649 - 1336611 - R 76 -6.3 -4.56093 | gap 2, opp_overlap 1336607 1336613 1336618 1336619, overlap 1336613 1336617 1336618 AACCTAATGATAAAA GAGCAATCGCTTATTTCCA TAA TGGAAATAAGC-A-TGCTT TTAGTTTTTATATCC TERM 1747 1336647 - 1336613 - R 81 -8.9 -3.8823 | gap 2, opp_overlap 1336607 1336613 1336618 1336619, overlap 1336611 1336617 1336618 CCTAATGATAAAAGA GCAATCGCTTATTTCCA TAA TGGAAATAAGC-A-TGC TTTTAGTTTTTATAT TERM 1748 1336613 - 1336647 + r 93 -8.9 -4.84033 | gap 2, opp_overlap 1336613 1336611 1336617 1336618, overlap 1336607 1336618 1336619 CCTAATGATAAAAGA GCAATCGCTTATTTCCA TAA TGGAAATAAGC-A-TGC TTTTAGTTTTTATAT TERM 1749 1336645 - 1336617 - R 82 -9.7 -3.58428 | opp_overlap 1336613 1336607 1336618 1336619, overlap 1336613 1336611 1336618 ATGATAAAAGAGCAA TCGCTTATTTCCA TAA TGGAAATAAGCAT GCTTTTAGTTTTTAT TERM 1750 1336644 - 1336618 - R 100 -13.2 -2.73972 | opp_overlap 1336613 1336607 1336618 1336619, overlap 1336617 1336613 1336611 TGATAAAAGAGCAAT CGCTTATTTCCA TAA TGGAAATAAGCA TGCTTTTAGTTTTTA TERM 1751 1336618 - 1336644 + r 85 -11 -3.28005 | opp_overlap 1336618 1336617 1336613 1336611, overlap 1336613 1336607 1336619 TGATAAAAGAGCAAT CGCTTATTTCCA TAA TGGAAATAAGCA TGCTTTTAGTTTTTA TERM 1752 1336619 - 1336643 + r 100 -14.5 -2.55176 | opp_overlap 1336618 1336617 1336613 1336611, overlap 1336618 1336613 1336607 GATAAAAGAGCAATC GCTTATTTCCA TAA TGGAAATAAGC ATGCTTTTAGTTTTT PMI1262 1337827 - 1336739 - | ATP-binding protein PMI1263 1338131 - 1338412 + | hypothetical protein PMI1264 1338416 - 1339456 + | HlyD-family secretion protein (multidrug resistance protein) TERM 1753 1339750 - 1339767 + G 70 -2.7 -5.14985 | TACGCTTCTTTTTTA TGGCT TTTTTCTC AGCCA TTTTTATGTATTTAG TERM 1754 1340002 - 1340017 + G 82 -4 -5.4505 | AAATTTCAACGCGCT TTATGG CAGC CCATGA TTTTTTCTTAGGGAA TERM 1755 1341089 - 1341074 - g 71 -4 -4.84602 | opp_overlap 1341087 AGATAAAGAAAGAAA CAAAGT ACTC ACCTTG TTTTTTAAACAGTCA PMI1265 1339443 - 1341299 + | multidrug resistance protein TERM 1756 1341585 - 1341575 - g 72 -3.2 -5.1101 | TTATTAGCGAAAAAA TCAG CCA CCGA TATTGGTATGGTAGA TERM 1757 1342192 - 1342178 - g 95 -6.4 -5.626 | GATGTGATAAAAAAA GCGTTA TCA CAACGC CCTGATATTTTAGCT PMI1266 1341299 - 1342771 + | channel-forming component of a multidrug resistance efflux pump PMI1267 1342829 - 1343227 + | hypothetical protein PMI1268 1343319 - 1344671 + | ATP-binding/heat shock protein TERM 1758 1344669 - 1344690 + F 70 -4.5 -4.74453 | gap 1, opp_overlap 1344669 1344672, overlap 1344672 GAAGTTTGTTTTAAA TAG-GCGGTT TTA AATCGCTCTA TTTTTAAATATATTA TERM 1759 1344712 - 1344756 + F 100 -9.5 -5.24647 | AATATATTAGACTCA GCATGTGGTGTTTATTTGATA ATT TGTCAATTAAAGGCCATATGC TTTTCTTTTATCTAT TERM 1760 1345594 - 1345580 - g 73 -8.6 -3.74224 | TTTAAATTAGGTAAA CATCTC AAT GAGATG GCCTCACAATTAGCC PMI1269 1344809 - 1345834 + | beta-eliminating lyase TERM 1761 1345873 - 1345903 + F 88 -12 -2.9176 | opp_overlap 1345877, overlap 1345875 1345877 CTTCACTCACTTTAT GATATTACGCGTGT AAT AAGCGCGTAATATC TATCTCGATCGCGTT TERM 1762 1345875 - 1345901 + F 72 -8.8 -3.0094 | opp_overlap 1345877, overlap 1345873 1345877 TCACTCACTTTATGA TATTACGCGTGT AAT AAGCGCGTAATA TCTATCTCGATCGCG PMI1270 1346007 - 1346270 + | hypothetical protein TERM 1763 1346278 - 1346328 + F 79 -6.6 -4.63932 | gap 1, opp_overlap 1346276 1346285, overlap 1346268 1346282 1346283 1346285 ATCGTTAGCAATAGC TATTA-TATTAGCCCTAATATAT CAATAT ATTTATTAGGGCTAATAGTTATA TTTTCTTGAAAGGTA TERM 1764 1346282 - 1346323 + F 85 -9 -4.0865 | opp_overlap 1346276 1346285, overlap 1346278 1346283 1346285 TTAGCAATAGCTATT ATATTAGCCCTAATATAT CAATAT ATTTATTAGGGCTAATAG TTATATTTTCTTGAA TERM 1765 1346283 - 1346322 + F 90 -12.5 -3.04106 | opp_overlap 1346276 1346285, overlap 1346282 1346278 1346285 TAGCAATAGCTATTA TATTAGCCCTAATATAT CAATAT ATTTATTAGGGCTAATA GTTATATTTTCTTGA TERM 1766 1346285 - 1346320 + F 83 -10.7 -3.05614 | opp_overlap 1346276 1346285, overlap 1346283 1346282 1346278 GCAATAGCTATTATA TTAGCCCTAATATAT CAATAT ATTTATTAGGGCTAA TAGTTATATTTTCTT TERM 1767 1346320 - 1346285 - f 81 -10.7 -2.82987 | opp_overlap 1346285 1346283 1346282 1346278, overlap 1346276 GCAATAGCTATTATA TTAGCCCTAATATAT CAATAT ATTTATTAGGGCTAA TAGTTATATTTTCTT PMI1271 1346630 - 1347229 + | LysE-family transporter TERM 1768 1347257 - 1347238 - T 86 -7.1 -4.89838 | opp_overlap 1347238 CCAATAAATAGAAAA GGGCAAG TATCAT CTCGCCC TTTGTATAACCCTGA xylB 1348745 - 1347291 - | xylulose kinase TERM 1769 1348781 - 1348812 + r 83 -6.7 -4.87786 | opp_overlap 1348783 1348787, overlap 1348783 TATGTTAATTAAATC AATAAACACAGCG CTACTC TGCTGTGTTTATC TTTTTATACCCTTAA TERM 1770 1348810 - 1348783 - R 77 -8.6 -3.61468 | opp_overlap 1348781 1348783, overlap 1348787 TGTTAATTAAATCAA TAAACACAGC GCTACTCT GCTGTGTTTA TCTTTTTATACCCTT TERM 1771 1348783 - 1348810 + r 85 -9.3 -4.05669 | opp_overlap 1348783 1348787, overlap 1348781 TGTTAATTAAATCAA TAAACACAGCG CTACTC TGCTGTGTTTA TCTTTTTATACCCTT xylA 1350140 - 1348824 - | xylose isomerase TERM 1772 1349466 - 1349476 + g 79 -5.4 -4.85822 | GATGAGCAGTGTACC TTGG AAT CCAA TTTTATGTTTATGCT PMI1274 1351626 - 1350151 - | Na+/H+ antiporter TERM 1773 1351401 - 1351412 + g 73 -2.2 -5.26316 | TCAGCAAAGCCGGCA TCGT TTTG GCGA TTTTTTGTGAGATAG PMI1275 1352802 - 1351633 - | aminotransferase TERM 1774 1352460 - 1352475 + g 71 -7.6 -3.88583 | opp_overlap 1352459 TAGGATGATAAGCAG GTGACA AGGT TGTCAC TTTATCGCCAATTTG TERM 1775 1352691 - 1352681 - G 79 -5.4 -4.89477 | TTGTTAATAATAAAA TCTG GTG CAGA AATATCCATATCGGC TERM 1776 1352719 - 1352696 - G 74 -9 -3.51934 | gap 1, overlap 1352694 TCTGGTGCAGAAATA TCCA-TATCGG CAA CCGATAATGGA ATAACATTGGCGTTA TERM 1777 1353937 - 1353958 + G 75 -8.1 -4.07687 | gap 1 ACGCTGTAAATATGT CGC-GTTCTA ATT TAGAACAGCG TTTTAAGAAAGAAGT xylR 1352991 - 1354160 + | xylose operon regulator (AraC-family transcriptional regulator) PMI1277 1354457 - 1354173 - | hypothetical protein PMI1278 1355629 - 1354562 - | hypothetical protein TERM 1778 1355616 - 1355631 + g 79 -4.8 -5.1167 | opp_overlap 1355616 TATTTACCTACAGCA TAATGA ACTT TCATTA TTTTTCTCTTACGTT PMI1279 1355851 - 1356165 + | hypothetical protein TERM 1779 1356244 - 1356278 + G 70 -8.6 -3.35597 | opp_overlap 1356251, overlap 1356242 GAGCATACTTTGGAG TCAGCAATAGCCGC GGTTGGA GCCGCTATTGCGGA TATTTCCAGAGTAAA TERM 1780 1356877 - 1356858 - g 74 -6.4 -4.46615 | opp_overlap 1356857 GACGATTAATGAAAA GGGCAATA AAGC TTTTGCCC AATATTTTAATATAA PMI1280 1356199 - 1356900 + | ArsR-family transcriptional regulator PMI1281 1357401 - 1356937 - | hypothetical protein PMI1282 1357789 - 1357391 - | hypothetical protein TERM 1781 1358665 - 1358692 + H 72 -2.8 -5.39721 | AAAGATAATCATATT GGAATATAAATA TTTT TATGAATATTCC TTTTTTATATGCTAG TERM 1782 1359468 - 1359445 - g 71 -6 -4.13995 | CCTGGAGAAATTAAA GTTACGGCCT TAAG AAGCTGTAAC GTGACAAGTAGTACT PMI1283 1358773 - 1359900 + | hypothetical protein PMI1284 1360544 - 1360035 - | probable acetyltransferase PMI1285 1360699 - 1361190 + | hypothetical protein osmB 1361449 - 1361670 + | osmotically-inducible lipoprotein TERM 1783 1361724 - 1361697 - f 100 -14.4 -3.62275 | overlap 1361719 ATTTACTATGCTAAA CTGAGCTTATAA ATTT TTATAAGCTCAG ATTCGAGCAATGACC PMI1287 1361766 - 1361969 + | hypothetical protein ydfG 1362212 - 1362961 + | NADP-dependent L-serine/L-allo-threonine dehydrogenase PMI1289 1363059 - 1363415 + | hypothetical protein PMI1290 1363465 - 1363701 + | hypothetical protein TERM 1784 1363728 - 1363754 + T 80 -5.9 -5.05782 | opp_overlap 1363733, overlap 1363733 ATAGAATTAATAGCT AAAAAGGGTAC TTTGT GTGCCCTTTTC TTTTTTAACCTAAAT TERM 1785 1363733 - 1363749 + T 86 -5.8 -5.42198 | opp_overlap 1363733, overlap 1363728 ATTAATAGCTAAAAA GGGTAC TTTGT GTGCCC TTTTCTTTTTTAACC TERM 1786 1363841 - 1363816 - T 100 -8.3 -5.95539 | TGTTAAATAAAAAAA CACCCAATGAG TTAA CCCATTAGGCG TTGATAAGTAATAAG TERM 1787 1363880 - 1363904 + T 81 -4.5 -5.33331 | opp_overlap 1363880, overlap 1363889 1363892 AATATTAATAGGAAA TAAGTTATT GAATAGA AATAACTTA TTTTTATTCTCTTTA TERM 1788 1363889 - 1363913 + T 73 -8.1 -3.55262 | opp_overlap 1363880, overlap 1363880 1363892 AGGAAATAAGTTATT GAATAGAAATA ACT TATTTTTATTC TCTTTAATTGACCTT bioD 1364602 - 1363931 - | dethiobiotin synthetase TERM 1789 1364189 - 1364175 - G 73 -10 -2.89793 | TGATTGACACAACCA GGTTGG ATC CCAACC ACTAGAACAACAGGA TERM 1790 1364688 - 1364701 + r 84 -5.3 -5.32565 | ACTGTTTATGGTGGC TTGAG TTAG CTCAA TTTTTTAGTTAATTG mlc 1366009 - 1364798 - | protein Mlc (making large colonies protein) (ROK-family transcriptional regulator) TERM 1791 1364865 - 1364875 + g 73 -6.8 -4.1673 | ACTAGTGATGCCGCT GGCA ATG TGCC TTTATTGCGCAATTC TERM 1792 1365888 - 1365898 + g 81 -5.4 -5.1101 | opp_overlap 1365879, overlap 1365874 GTAATACTGGCAGGC GCAA GTG TTGC TTTTTTAGATAATGA PMI1293 1367053 - 1366139 - | LysR-family transcriptional regulator TERM 1793 1367155 - 1367136 - H 81 -3 -5.74122 | gap 1, opp_overlap 1367141 1367152, overlap 1367141 1367152 TATTAGACAAAAAAA TCAAATGTT TCT AACATT-GA TATAAATCAAATTTA TERM 1794 1367316 - 1367326 + G 89 -5.4 -5.38249 | opp_overlap 1367316 CGCTTTATATAAAAG TGAC AGT GTCA TTTTTTATGGTTGGT PMI1294 1367192 - 1368457 + | MFS-family transporter TERM 1795 1368790 - 1368826 + F 100 -9 -5.46698 | gap 1, overlap 1368794 CAACAAAGTGCCCTT TTATCGCTATACTGTAT AAAT AAACAGTATAGCG-TAA TTTTTTAATTTTCAC TERM 1796 1368794 - 1368823 + F 91 -12.3 -3.48747 | overlap 1368790 AAAGTGCCCTTTTAT CGCTATACTGTAT AAAT AAACAGTATAGCG TAATTTTTTAATTTT tus 1368930 - 1369859 + | DNA replication terminus site-binding protein TERM 1797 1369897 - 1369875 - T 100 -16.4 -6.10295 | opp_overlap 1369871 1369870 GCAATAGAAAAAAAA TCCCGCTATC TGG GATAGCGGGA TCCAATATTGTACTA fumC 1371332 - 1369935 - | fumarate hydratase, class II TERM 1798 1371887 - 1371868 - H 70 -7.2 -3.71353 | overlap 1371869 AAACAATCTTAAGAA CGTATGCT ACGA AGCATACA CAGAGGATGGACTAG TERM 1799 1371886 - 1371869 - H 71 -8.5 -2.81727 | overlap 1371868 AACAATCTTAAGAAC GTATGCT ACGA AGCATAC ACAGAGGATGGACTA TERM 1800 1373057 - 1373041 - g 79 -5.1 -5.09895 | GATGCACTGAAAAAA GAAGACA AGG CGCCTTC AGTTCTGTTTAATGA PMI1297 1371907 - 1373580 + | hypothetical protein TERM 1801 1373649 - 1373619 - T 100 -11.2 -4.34737 | opp_overlap 1373619 TCACTAATCAATAAA GCCCCCTATCACCA TTC TTATGATAAGGGGC TTTTTATTGTTATTA TERM 1802 1373619 - 1373649 + T 93 -6.9 -5.3798 | opp_overlap 1373619 TCACTAATCAATAAA GCCCCCTATCA CCATTCTTA TGATAAGGGGC TTTTTATTGTTATTA PMI1298 1374621 - 1373662 - | hypothetical protein PMI1299 1374827 - 1374672 - | hypothetical protein add 1375181 - 1376182 + | adenosine deaminase TERM 1803 1376219 - 1376196 - T 100 -14 -4.92777 | opp_overlap 1376196 AATATTAACGAAAAA TACCGCCTTA TTGC TAAGGCGGTA TTTTTATCTTTTGCT TERM 1804 1376196 - 1376219 + T 100 -14 -5.30339 | opp_overlap 1376196 AATATTAACGAAAAA TACCGCCTTA TTGC TAAGGCGGTA TTTTTATCTTTTGCT PMI1301 1377236 - 1376241 - | hypothetical protein PMI1302 1378302 - 1377259 - | oxidoreductase PMI1303 1378435 - 1378902 + | hypothetical protein rnfA 1378996 - 1379577 + | electron transport complex protein rnfB 1379577 - 1380203 + | electron transport complex protein TERM 1805 1381693 - 1381681 - g 73 -7.7 -3.83868 | opp_overlap 1381681, overlap 1381677 CACCAACAAAATGAA GTGCA ATC TGCAC TTTCTCGTGTAAAAG TERM 1806 1381681 - 1381693 + G 75 -7.7 -4.0162 | opp_overlap 1381681 1381677 CACCAACAAAATGAA GTGCA ATC TGCAC TTTCTCGTGTAAAAG TERM 1807 1381904 - 1381891 - g 77 -9.5 -3.54543 | opp_overlap 1381890 1381886 AGTGATCCGCGCAAA GCCGC TGTA GCGGC AGCATTAGCTCGTGT TERM 1808 1382024 - 1382011 - g 79 -9.5 -3.66999 | ACCGATCCACGCAAA GCCGC TGTA GCGGC AGCATTGGCCCGCGT TERM 1809 1382690 - 1382674 - g 80 -6.5 -4.68528 | AAAGCTAAAAAAGAA GCACAGC AAC GCCATGC TAAAGAAGAAGTGAC rnfC 1380196 - 1382715 + | electron transport complex protein TERM 1810 1383772 - 1383783 + G 71 -7.2 -3.89881 | TTATTGATAGTTATA CCCG TCCT CGGG TTTATGGACATTAAT rnfD 1382721 - 1383797 + | electron transport complex protein TERM 1811 1384052 - 1384034 - g 74 -4.6 -4.88407 | opp_overlap 1384037, overlap 1384037 TTAGGTAATGAAAAA CCACATAA ACT TTATGTTG CTCGTTTTAATGGTA rnfG 1383797 - 1384435 + | electron transport complex protein TERM 1812 1384846 - 1384860 + G 78 -2.8 -5.45802 | TTGCTATGGGATTAG GTGC AACAGCG GCAC TTTTTGTTTTAGGGG rnfE 1384437 - 1385141 + | electron transport complex protein TERM 1813 1385737 - 1385727 - g 76 -6.8 -4.38712 | opp_overlap 1385727 1385726 TGTATTGCCAGAAAA CCAC GGT GTGG CTCTTGTATTATTGA nth 1385154 - 1385792 + | endonuclease III rnb 1385905 - 1387848 + | exoribonuclease II TERM 1814 1387878 - 1387903 + T 100 -14.9 -5.80003 | opp_overlap 1387878 AATAGATATTATCAA GCTGATAACCT ACTC AGGTTATCAGC TTTTTTATTTATTGC TERM 1815 1387903 - 1387878 - T 100 -14.9 -3.27661 | opp_overlap 1387878 AATAGATATTATCAA GCTGATAACCT ACTC AGGTTATCAGC TTTTTTATTTATTGC TERM 1816 1387957 - 1387945 - T 80 -7.7 -4.19483 | CTACAGATATATAAA GTGAC ACT GTCAC CACTAAAACTAGTTT TERM 1817 1388014 - 1387987 - T 88 -7 -5.29445 | TGCTAATAATAAAAA TGCGCCGACCTT CAAC AAGATAAGCGCA CTATATGTAGAATAC PMI1312 1388394 - 1388071 - | translation initiaiton factor pyrF 1389133 - 1388387 - | orotidine-5'-phosphate decarboxylase TERM 1818 1389034 - 1389051 + g 75 -2.7 -5.28683 | AAGGGTCGATAAGTT GTGCA AAATCGAG TGCAC TTTTTTGGTCTTCAT TERM 1819 1389180 - 1389168 - R 82 -7.7 -4.34947 | AAGAGACTATTAAAA GTGAC ATC GTCAC TGACCATCTAAGCCA PMI1314 1390346 - 1389177 - | hypothetical protein TERM 1820 1390247 - 1390220 - G 72 -8.4 -3.49728 | AAAGTAAAAAGTTAA CCCCTGCCACAT ATTC ACGTGACAGGCG ATCGGCATTTTGCTG PMI1315 1390676 - 1390359 - | hypothetical protein TERM 1821 1390494 - 1390484 - G 80 -4.6 -5.26875 | CTCGCAAGTAAAAAA CGCC ACT GACG ATCCAGCCCAGTACA pgpB 1391554 - 1390835 - | phosphatidylglycerophosphatase B ribA 1391833 - 1392432 + | GTP cyclohydrolase II TERM 1822 1392470 - 1392489 + F 91 -7.1 -5.13722 | opp_overlap 1392470 AGCGTTATTATTCAA TCCGGGT GATTTA GCCCGGA TTTTATTTTCCTGCA TERM 1823 1392976 - 1392988 + G 70 -3.4 -4.94262 | opp_overlap 1392967 TTATAACCTCGTCGC GGTA GGCAA TACC TTTGTTTTTCCTATG nlpA 1392662 - 1393477 + | lipoprotein-28 TERM 1824 1393496 - 1393520 + T 93 -10.1 -4.29829 | opp_overlap 1393495 1393492 1393491, overlap 1393498 1393518 CGACTTATAATTTAT CAGGTCACTTA TAA TAAGTGACCTA TTTATTAATAGTTAT TERM 1825 1393498 - 1393518 + T 100 -12.7 -3.74047 | opp_overlap 1393495 1393492 1393491, overlap 1393496 ACTTATAATTTATCA GGTCACTTA TAA TAAGTGACC TATTTATTAATAGTT PMI1319 1395004 - 1393532 - | transferase TERM 1826 1393938 - 1393951 + g 79 -5.3 -5.1523 | opp_overlap 1393930, overlap 1393930 GTCAAGACATCACCT GATGT TTCT ACATC TTTTTCTATTCTAGG TERM 1827 1394457 - 1394471 + g 75 -10 -3.16683 | opp_overlap 1394459 TCAATATCATCCCAA GAGCCA AAT TGGCTC TTAATAACCTCACCT TERM 1828 1395171 - 1395145 - R 93 -8.1 -5.1471 | overlap 1395141 ATTATAAAAAAGAAA GCGAAGAATTA ATTCA TCATTCTTCGC CAACTAATTAATACT acnA 1397871 - 1395199 - | aconitate hydratase 1 TERM 1829 1395907 - 1395917 + g 74 -4.6 -4.92783 | overlap 1395891 GTGAATATCTTTAAT CGCC TCT GGTG TTTTTGTCATACCTT TERM 1830 1396484 - 1396500 + g 74 -4.3 -4.84017 | GACGATTTGACCCAT GGCTTAC GCT GCAGGCC TTTTTCTACCGCATT TERM 1831 1398869 - 1398892 + G 71 -7.6 -3.96447 | gap 1 TTTAAATAAGTTTCG TCAG-TTGAGT ATT ACTCAATCTGA TTCATTTTTTAGTGG PMI1321 1398087 - 1398926 + | hypothetical protein TERM 1832 1398977 - 1398958 - T 87 -8.6 -4.23007 | gap 1, opp_overlap 1398958 TACATAATGGTAAAA GGCGGG-AT AAT ATACCCGCC TTTGCGTATTAAACT TERM 1833 1398958 - 1398977 + T 79 -8.6 -3.76641 | gap 1, opp_overlap 1398958 TACATAATGGTAAAA GGCGGGATA ATA TA-CCCGCC TTTGCGTATTAAACT cysB 1399960 - 1398986 - | cys regulon transcriptional activator (LysR-family transcriptional regulator) PMI1323 1400302 - 1400111 - | hypothetical protein PMI1324 1401148 - 1400402 - | lipoprotein PMI1325 1402002 - 1401253 - | lipoprotein PMI1326 1402855 - 1402106 - | lipoprotein PMI1327 1403709 - 1402960 - | lipoprotein TERM 1834 1403209 - 1403223 + g 79 -5 -5.09204 | opp_overlap 1403209 TGATGATGTGTAATA GATGGA TTG TTCATC TTTTTCTTCCACTAT PMI1328 1404566 - 1403814 - | lipoprotein TERM 1835 1404019 - 1404029 + g 70 -2.6 -5.15167 | ATTTCTCCATCTGAT TTAT TGG ATAA TTTTTGTTCATCCTC PMI1329 1406457 - 1404547 - | lipase PMI1330 1407264 - 1406479 - | regulatory protein TERM 1836 1406933 - 1406909 - G 76 -2.2 -5.52384 | opp_overlap 1406910 1406914, overlap 1406910 1406914 CGCGCATCAAAAAAA CGAAAGATAA CTTTT TTATCATTCA TTATCACTAGTTGAT PMI1331 1409237 - 1407264 - | VgrG-like protein TERM 1837 1407304 - 1407326 + g 95 -8.4 -5.41143 | overlap 1407306 ATTATTCCCCCTGAG TGCTGTGCTG CTA CTGCACAGTA TTTTTTTACAGGATA TERM 1838 1407306 - 1407324 + g 85 -8.8 -4.34482 | overlap 1407304 TATTCCCCCTGAGTG CTGTGCTG CTA CTGCACAG TATTTTTTTACAGGA TERM 1839 1408907 - 1408921 + g 73 -8.6 -3.6692 | overlap 1408905 CAGGCACCGTTATTT GTCGAA AAA TTCGAC TGTTTTGCCCTAAAG PMI1332 1409546 - 1409271 - | hypothetical protein TERM 1840 1409874 - 1409859 - R 78 -9 -3.41454 | overlap 1409849 1409868 ACAAATTACTCATAA CCCAGT AAAT ACTGGG TACAGTAAAATATAT TERM 1841 1410322 - 1410310 - R 80 -5.5 -5.28561 | opp_overlap 1410310 AATACATAAGAAAAA CCGCT TAA AGCAG TCGTTTTTTAATCAA TERM 1842 1410359 - 1410345 - R 74 -7.2 -3.97209 | TTAATCAATATTAAA TGTGAT TTC ATCACA TTGCGATGGGATAAA TERM 1843 1410437 - 1410408 - R 90 -12.3 -3.31188 | opp_overlap 1410408 1410409 1410415, overlap 1410401 1410409 1410415 GAGTATAACCATTAA CCCAAAAGCCATC ATCA GATAGCTTTTGGA TTATAAATAAATGAA TERM 1844 1410409 - 1410436 + r 86 -11.4 -2.61912 | opp_overlap 1410409 1410408 1410401 1410415, overlap 1410408 1410415 AGTATAACCATTAAC CCAAAAGCCATC ATCA GATAGCTTTTGG ATTATAAATAAATGA TERM 1845 1410436 - 1410409 - R 100 -13.6 -2.58231 | opp_overlap 1410408 1410409 1410415, overlap 1410408 1410401 1410415 AGTATAACCATTAAC CCAAAAGCCATC ATCA GATAGCTTTTGG ATTATAAATAAATGA sodC 1410977 - 1410453 - | copper-zinc superoxide dismutase TERM 1846 1411117 - 1411096 - R 100 -8.8 -5.53288 | opp_overlap 1411096 CTTAATGCAAAAAAA GCGACTTA TGTCAG TAAGTCGC TTTTTTATCTTAAAA TERM 1847 1411096 - 1411117 + r 100 -9.5 -5.47159 | opp_overlap 1411096 CTTAATGCAAAAAAA GCGACTTAT GTCA GTAAGTCGC TTTTTTATCTTAAAA topA 1413748 - 1411151 - | DNA topoisomerase I TERM 1848 1411302 - 1411317 + g 81 -5.4 -5.06451 | TCGGTTACAGGTGCT TGTGCT AAGT AGCGCA TTTTTTCCGATAATC TERM 1849 1412834 - 1412818 - G 71 -7.3 -3.86194 | AACCTGCTTCATAAA GACGTTG AGC CAACATC ATGGTCTTTTTCACC PMI1335 1414051 - 1414302 + | hypothetical protein TERM 1850 1414505 - 1414525 + T 100 -11.1 -5.7946 | ATCAATTATTTTTAT GCCAGTGTG TAC CTCACTGGC TTTTTTTATTCGAAA TERM 1851 1414604 - 1414565 - T 100 -8.8 -6.01369 | opp_overlap 1414564 1414565 1414567, overlap 1414599 TAAATAATAAAAAAA TAGCGATACTCAGC TTACATCTAACT GCTGAATATCGCTA GTTTGATAGCAACTC sohB 1415681 - 1414635 - | probable protease TERM 1852 1415639 - 1415623 - G 72 -8.7 -3.49771 | overlap 1415621 1415612 ACAATAGCAATAATA GCGACTA CAA CAGTCGC AATCTCAGCTAAAAA PMI1337 1415892 - 1416656 + | short chain dehydrogenase btuR 1416680 - 1417270 + | cobalamin adenosyltransferase PMI1339 1418270 - 1417323 - | lipoprotein TERM 1853 1417866 - 1417854 - G 73 -7.7 -3.85817 | opp_overlap 1417853 1417859 1417863 1417863, overlap 1417856 1417859 ATTGTTGTCGATAAA CACAG CAT CTGTG CTATTAATAGCACCA TERM 1854 1418395 - 1418421 + r 100 -16.8 -3.0094 | opp_overlap 1418395, overlap 1418398 AAGCTATCAAAAAAA GAAGTCTGCTAA AAA TTAGCAGACTTC TGTATCTAACTGAAA TERM 1855 1418421 - 1418395 - R 100 -16.8 -5.54894 | opp_overlap 1418395 1418398 AAGCTATCAAAAAAA GAAGTCTGCTAA AAA TTAGCAGACTTC TGTATCTAACTGAAA TERM 1856 1418398 - 1418418 + r 100 -12.7 -3.64912 | opp_overlap 1418395, overlap 1418395 CTATCAAAAAAAGAA GTCTGCTAA AAA TTAGCAGAC TTCTGTATCTAACTG rluB 1419394 - 1418468 - | ribosomal large subunit pseudouridine synthase B TERM 1857 1419505 - 1419466 - R 85 -6.8 -5.12617 | gap 1, opp_overlap 1419474, overlap 1419469 CAATCAGGTAAAAAA TA-ACCCATGTTTATTAAA CTG TTTAACAAACACAGGTCTA TTGATTCAGGGATAA TERM 1858 1419501 - 1419469 - R 93 -10.1 -4.64763 | opp_overlap 1419474, overlap 1419466 TCAGGTAAAAAATAA CCCATGTTTATTAAA CTG TTTAACAAACACAGG TCTATTGATTCAGGG PMI1341 1420381 - 1419761 - | dsRNA-binding protein trpH 1421266 - 1420406 - | hypothetical protein TERM 1859 1420853 - 1420824 - G 75 -2.8 -5.30155 | gap 1 TCATTAACCAAAAAA CGCGCAAAGTGTC CTCGT GTCAC-TTGCCCG CCTTTCGCTAGGGCA TERM 1860 1421509 - 1421523 + H 100 -8.5 -5.71712 | opp_overlap 1421509 CAGTGATATCTAAAA CCCGC CTACC GCGGG TTTTTTTATATGCCA TERM 1861 1421523 - 1421509 - H 87 -8.5 -4.24204 | opp_overlap 1421509 CAGTGATATCTAAAA CCCGC CTACC GCGGG TTTTTTTATATGCCA TERM 1862 1421883 - 1421862 - g 100 -6.5 -5.83211 | CACTAAAAGAAAAAA GCACACTCT CCGT AGAGCGAGC GGAACAATGTGTATT trpE 1421585 - 1423162 + | anthranilate synthase component I TERM 1863 1423728 - 1423718 - g 70 -5.4 -4.31835 | AACTTTTACAACAAA CCAT TGC ATGG GCACAAGCACCAAGA trpD 1423156 - 1423755 + | anthranilate synthase component (glutamine amidotransferase) trpD' 1423757 - 1424755 + | anthranilate synthase component (anthranilate phosphoribosyltransferase) trpC 1424761 - 1426134 + | tryptophan biosynthesis protein [includes: indole-3-glycerol phosphate synthase; N-(5'-phospho-ribosyl)anthranilate isomerase] TERM 1864 1426480 - 1426507 + G 79 -10.6 -3.2375 | gap 1, opp_overlap 1426476, overlap 1426475 TATTGCAGAAACGGG CGCTG-GGCAACA TGG TGTTGCCACTGCG TTAGCTTGTGCCCTG trpB 1426151 - 1427341 + | tryptophan synthase beta chain trpA 1427341 - 1428150 + | tryptophan synthase alpha chain TERM 1865 1428171 - 1428201 + F 100 -10.7 -4.84363 | gap 1 AAATTATTATCGCCG TCTGCTTAGAGAAA ACTT TTTC-CTAAGCAGA TTTTTCCTAATTTAA TERM 1866 1428609 - 1428588 - g 71 -6.6 -4.03085 | TGAGAAAAACCTAAA CTCAACAC AAATTA GCGTTGAG ACATTTAAAGGTAAA PMI1349 1428421 - 1428735 + | lipoprotein TERM 1867 1428755 - 1428788 + T 100 -12.7 -2.8547 | opp_overlap 1428758 1428765 1428766, overlap 1428758 1428766 TTTTTTATAAGTCAG TAAGAAAAAAGCCAC TTCG GTGGTTTTTTTCTTG TCTCATCTAAAGCAT TERM 1868 1428785 - 1428758 - T 82 -10 -3.23711 | opp_overlap 1428755 1428758 1428766, overlap 1428765 1428766 TTTATAAGTCAGTAA GAAAAAAGCCAC TTCG GTGGTTTTTTTC TTGTCTCATCTAAAG TERM 1869 1428758 - 1428785 + T 95 -12.2 -3.57651 | opp_overlap 1428758 1428765 1428766, overlap 1428755 1428766 TTTATAAGTCAGTAA GAAAAAAGCCAC TTCG GTGGTTTTTTTC TTGTCTCATCTAAAG TERM 1870 1428778 - 1428765 - T 71 -2.3 -5.5112 | opp_overlap 1428758 1428755 1428766, overlap 1428758 1428766 GTCAGTAAGAAAAAA GCCAC TTCG GTGGT TTTTTTCTTGTCTCA TERM 1871 1428766 - 1428777 + T 100 -5.8 -5.9218 | opp_overlap 1428765 1428758 1428766, overlap 1428758 1428755 TCAGTAAGAAAAAAG CCAC TTCG GTGG TTTTTTTCTTGTCTC TERM 1872 1428943 - 1428957 + T 71 -8.6 -2.86965 | overlap 1428942 1428954 TTTTCGATGTTATTT TCACCA CAC TGGTGA CTTTCACTTAAATTT TERM 1873 1428972 - 1428985 + T 71 -5.3 -4.73613 | ACTTTCACTTAAATT TGATG CGAC CATCA TTTTCTTAATAGTAC TERM 1874 1429349 - 1429332 - T 100 -10.5 -6.32216 | opp_overlap 1429329 ACAGATAAAAAAAAA GCGGAGC CACT GCCCCGC TGATACTTAATAGCA ompW 1430028 - 1429387 - | outer membrane protein TERM 1875 1429966 - 1429952 - G 76 -2.1 -5.4833 | GCACGGAATAAAAAA TCACC CGCTT GATGA GCAAAAGAAATAGAC TERM 1876 1430003 - 1429977 - G 74 -5.3 -4.73614 | overlap 1429981 GATGAGCAAAAGAAA TAGACGG-TGCAA GTG TTGCAGCCG-CTA GAATAAGCGCAGAAA PMI1351 1430472 - 1431233 + | hypothetical protein TERM 1877 1431289 - 1431249 - T 100 -13.5 -3.72576 | opp_overlap 1431239 1431249 1431252, overlap 1431252 CCCCCTCGCAGCAAA CAATGCCGCGCTAATGT GATTAAT AGATTAGCACGGCATTG TTATTAACATAATCA TERM 1878 1431249 - 1431289 + T 95 -12 -3.66018 | opp_overlap 1431249 1431252, overlap 1431239 1431252 CCCCCTCGCAGCAAA CAATGCCGCGCTAATGTG ATTAA TAGATTAGCACGGCATTG TTATTAACATAATCA TERM 1879 1431286 - 1431252 - T 86 -9.4 -4.00042 | opp_overlap 1431239 1431249 1431252, overlap 1431249 CCTCGCAGCAAACAA TGCCGCGCTAATGT GATTAAT AGATTAGCACGGCA TTGTTATTAACATAA TERM 1880 1431252 - 1431286 + T 77 -7.9 -3.96068 | opp_overlap 1431252 1431249, overlap 1431239 1431249 CCTCGCAGCAAACAA TGCCGCGCTAATGTG ATTAA TAGATTAGCACGGCA TTGTTATTAACATAA PMI1352 1433150 - 1431366 - | sulfate transporter TERM 1881 1431413 - 1431443 + g 81 -2.7 -5.67711 | gap 1, overlap 1431413 1431416 TGGCTTGGTTATCTT CAGCAAACGGCA CTTGTTGT TGCTGTTTG-TG TTTTTCTTTTATTTG TERM 1882 1431416 - 1431441 + g 70 -5.5 -4.41779 | overlap 1431413 1431413 CTTGGTTATCTTCAG CAAACGGCA CTTGTTGT TGCTGTTTG TGTTTTTCTTTTATT TERM 1883 1433496 - 1433506 + G 93 -5.4 -5.65678 | TACTTGATTTCGCTC CACT ATT AGTG TTTTTTATCTTTTAT ispZ 1433456 - 1434109 + | probable intracellular septation protein TERM 1884 1434127 - 1434150 + F 89 -11 -3.69437 | overlap 1434123 ACCTCTATTTTATCG GGAGACTGCC TCAA GGGAGTCTCC TTAGTTTTAACATTG PMI1354 1434183 - 1434614 + | acyl-CoA thioester hydrolase TERM 1885 1434674 - 1434636 - T 90 -11.3 -3.40139 | opp_overlap 1434646, overlap 1434646 TAAGCTCAATAAAAC CAACAAAAAAGGCACTT ATCAA AAGTGCCTTTTTTATCA TTGAGTGATGTGAAG TERM 1886 1434664 - 1434646 - T 100 -8.9 -5.61689 | opp_overlap 1434646, overlap 1434636 AAAACCAACAAAAAA GGCACTT ATCAA AAGTGCC TTTTTTATCATTGAG TERM 1887 1434646 - 1434664 + T 100 -8.9 -5.37345 | opp_overlap 1434636 1434646 AAAACCAACAAAAAA GGCACTT ATCAA AAGTGCC TTTTTTATCATTGAG tonB 1435438 - 1434713 - | TonB protein TERM 1888 1435531 - 1435492 - R 81 -9 -3.85165 | gap 1 TAGTTTAAATGCAAA TAGCAATCATATTCAATAA CGT TTATCAAA-ATGATTGCTA TAACAACTAAAAAAG PMI1356 1435733 - 1435554 - | hypothetical protein TERM 1889 1435638 - 1435614 - G 76 -10.9 -2.57963 | opp_overlap 1435618, overlap 1435613 1435633 TCTAGAAGTATCAAG CTTACGCATTT GGT AAATACGTAAG TTACGGCGTGATTGA TERM 1890 1437459 - 1437472 + G 72 -4.5 -4.71584 | TCCATTTATGAATCG GGTGT TAGA ACGCC TTTGTTATTTCTTTA cls 1436041 - 1437501 + | cardiolipin synthetase TERM 1891 1437567 - 1437545 - f 82 -6.4 -4.93661 | overlap 1437560 ATATCAACAATAAAA TAGTTAGC GAAAACA GCTAACTA TCGATATAAATAGCG PMI1358 1437609 - 1437938 + | hypothetical protein TERM 1892 1438047 - 1438032 - T 100 -10.4 -4.96106 | TATAAAGACTAAAAA GGTCGC AAAA GCGACC TTAAAAAATATATTG PMI1359 1438622 - 1438086 - | outer membrane protein (attachment invasion locus protein) TERM 1893 1438916 - 1438937 + H 89 -8.9 -4.35348 | overlap 1438930 ATTAAATCTATTATT TTATGCTAT CTTT ATAGCATAA TTTATCTTATGTTAT TERM 1894 1438930 - 1438951 + H 79 -2.4 -5.87996 | overlap 1438916 TTTATGCTATCTTTA TAGCATAA TTTATC TTATGTTA TTTTTTTATTAGTTG PMI1360 1438975 - 1439364 + | hypothetical protein TERM 1895 1439403 - 1439382 - T 90 -10.1 -3.98649 | CACAACATATAACAA GGCCGCAAT AAAT AATGCGGCC CAAATTAATATATTA PMI1361 1439755 - 1439453 - | hypothetical protein TERM 1896 1440257 - 1440279 + G 73 -5.6 -4.53419 | GAGTGCTCAATATTT GGACATATCT TGC GGGTATGTTC TTTATTATTATCGTC PMI1362 1440211 - 1440864 + | transport protein TERM 1897 1440909 - 1440935 + F 82 -7.5 -4.59853 | gap 1, opp_overlap 1440895 1440909, overlap 1440894 GGCTGTTGTTATCAA TAGCGATTATCT TTGT AG-TAATCGCTA TTTTTCCCCCATTAC TERM 1898 1441226 - 1441216 - g 72 -3.2 -5.11033 | TAGAACCGTAAAAAA TGAG CAT CCCA AAAGAGCAATATAAT TERM 1899 1441275 - 1441260 - g 70 -2.6 -5.0809 | gap 1 AACAAATTACAAAAA CGCTTAC GCC GTAA-CG TTGGGCAAGCTATCG PMI1363 1441215 - 1442135 + | hypothetical protein TERM 1900 1442246 - 1442226 - T 100 -9.8 -6.25242 | opp_overlap 1442226 ATAAGCAAAAAAAAA CCGATGTT TATTT AACATCGG TGTAATAATGGTCAA TERM 1901 1442226 - 1442246 + T 75 -9.8 -2.83715 | opp_overlap 1442226 ATAAGCAAAAAAAAA CCGATGTT TATTT AACATCGG TGTAATAATGGTCAA PMI1364 1443433 - 1442450 - | transport protein TERM 1902 1442533 - 1442519 - G 74 -5 -4.68645 | CAGTGAAAAGCAAAA TATAGC AAA GCCATA AGGAAATTCATTACC PMI1365 1443798 - 1444130 + | lipoprotein TERM 1903 1444139 - 1444127 - f 70 -4.1 -4.9792 | GATCTTAGATAAAAA GTAAG TAA CTCAC TAGCTAAACAATGGA TERM 1904 1444144 - 1444173 + F 100 -11.7 -3.81258 | opp_overlap 1444148 1444151, overlap 1444148 AAGTAACTCACTAGC TAAACAATGGATT TTCG GATCCATTGTTTA TTTCGCTATTATTAC TERM 1905 1444169 - 1444148 - f 70 -7.4 -3.69094 | opp_overlap 1444148 1444144, overlap 1444151 AACTCACTAGCTAAA CAATGGAT TTTCGG ATCCATTG TTTATTTCGCTATTA TERM 1906 1444148 - 1444169 + F 85 -8.1 -4.49906 | opp_overlap 1444148 1444151, overlap 1444144 AACTCACTAGCTAAA CAATGGATT TTCG GATCCATTG TTTATTTCGCTATTA PMI1366 1444423 - 1444983 + | hypothetical protein TERM 1907 1445128 - 1445115 - T 77 -3.9 -5.38958 | opp_overlap 1445115 ACCTATAAATAAAAA GTATA AATT TATAC TTTGCATCAACTGCA TERM 1908 1445161 - 1445193 + T 72 -5.9 -4.45765 | gap 1, opp_overlap 1445160, overlap 1445163 ATTAGTCAAAACATT CA-TGCAAAATTAT ATTAAC ATAATTTTGCAATG TTTATTCCTTTTGAG TERM 1909 1445163 - 1445190 + T 71 -8.7 -2.87639 | opp_overlap 1445160, overlap 1445161 TAGTCAAAACATTCA TGCAAAATTAT ATTAAC ATAATTTTGCA ATGTTTATTCCTTTT TERM 1910 1445211 - 1445234 + T 100 -10.4 -6.06529 | TATTCCTTTTGAGTC TCCTTCTGTT TCAT AACAGAGGGA TTTTTTTTCTCTATC TERM 1911 1445290 - 1445269 - T 100 -8.1 -5.75342 | opp_overlap 1445267 1445269 TTCCCCTAAAAAAAA GTACGCAAT AATC ATTACGTAC TCTTTGCTAATATTT mppA 1446958 - 1445339 - | periplasmic murein peptide-binding protein precursor tpx 1447184 - 1447687 + | thiol peroxidase TERM 1912 1447750 - 1447726 - T 100 -13.7 -5.17576 | opp_overlap 1447730 GAGTAATGTAAAAAA CAAACGGGCTA ATA TAGCCCGTTTA TTTAAATAAAAACCA TERM 1913 1447730 - 1447746 + T 100 -12.3 -4.46112 | opp_overlap 1447726 AATGTAAAAAACAAA CGGGCTA ATA TAGCCCG TTTATTTAAATAAAA tyrR 1449352 - 1447787 - | transcriptional regulator TERM 1914 1448465 - 1448482 + g 74 -4.1 -5.16572 | AACAGTGCCTCGATT GGCTTGT TCAA AAAAGCC TTTTTTACCTTCGAT PMI1370 1449911 - 1449489 - | hypothetical protein TERM 1915 1450303 - 1450335 + r 78 -9.3 -3.37881 | opp_overlap 1450306, overlap 1450298 1450305 1450306 AATTTAGCGATAAAA AAACCTCAACAATAA TAC TTATTGTTGAGGCTA TTCAATTTATATTGA TERM 1916 1450305 - 1450333 + r 89 -11.9 -3.24721 | opp_overlap 1450306, overlap 1450303 1450298 1450306 TTTAGCGATAAAAAA ACCTCAACAATAA TAC TTATTGTTGAGGC TATTCAATTTATATT TERM 1917 1450332 - 1450306 - R 100 -15.4 -5.64274 | opp_overlap 1450305 1450303 1450298 1450306 TTAGCGATAAAAAAA CCTCAACAATAA TAC TTATTGTTGAGG CTATTCAATTTATAT TERM 1918 1450306 - 1450332 + r 100 -15.4 -2.53748 | opp_overlap 1450306, overlap 1450305 1450303 1450298 TTAGCGATAAAAAAA CCTCAACAATAA TAC TTATTGTTGAGG CTATTCAATTTATAT PMI1371 1451422 - 1450376 - | hypothetical protein PMI1372 1452813 - 1451419 - | ATP-binding protein TERM 1919 1451558 - 1451545 - G 71 -6.7 -4.07568 | opp_overlap 1451544 TTGCTTTTGCCAAAA TGCCT TTTC AGGCA ATCTCTTAGGAACTT TERM 1920 1452746 - 1452775 + g 70 -9.3 -3.1876 | opp_overlap 1452746, overlap 1452747 CTTAACCCTGTAACA GCGAGGCGTAAAT GCCT ATCTACGCCTCGA TTAATCAGTGCAGTT TERM 1921 1452775 - 1452746 - G 81 -11.5 -3.04322 | opp_overlap 1452746 1452747 CTTAACCCTGTAACA GCGAGGCGTAAAT GCCT ATCTACGCCTCGA TTAATCAGTGCAGTT TERM 1922 1452747 - 1452774 + g 83 -12.8 -2.50935 | opp_overlap 1452746, overlap 1452746 TTAACCCTGTAACAG CGAGGCGTAAAT GCCT ATCTACGCCTCG ATTAATCAGTGCAGT pspD 1453051 - 1452794 - | phage shock protein D TERM 1923 1453088 - 1453112 + r 72 -8.5 -3.1585 | opp_overlap 1453089, overlap 1453086 1453091 TTTATATCCAAATAA AGACGCTCCTA GTA TTGGAGCGTCA TATTAGATTAAGTGG TERM 1924 1453111 - 1453089 - R 100 -12 -4.48299 | opp_overlap 1453088 1453086 1453091 TTATATCCAAATAAA GACGCTCCTA GTA TTGGAGCGTC ATATTAGATTAAGTG pspC 1453492 - 1453136 - | phage shock protein C TERM 1925 1453427 - 1453416 - G 70 -5.8 -4.32583 | GGAATATTAAAATAA TGGG CAAG CCCA GCACATACGCCACGG pspB 1453722 - 1453492 - | phage shock protein B pspA 1454427 - 1453759 - | phage shock protein A TERM 1926 1454499 - 1454481 - H 85 -10.4 -3.45027 | overlap 1454479 AGTGTTGATTAAATA GCGTTATT AAC AATAACGC CCAGTTGCTATAGTT TERM 1927 1454948 - 1454913 - g 89 -9 -4.66609 | gap 1, opp_overlap 1454913 1454932 1454934 1454938 TACCGGAGCGAAAAA CCGCCATCAAGGACGTT TTG AGCGTGCC-GATGGCGG CTCTCTTTTTCTTGA TERM 1928 1454932 - 1454951 + G 71 -6.4 -4.19587 | gap 1, opp_overlap 1454913, overlap 1454913 1454934 1454938 CATCAAGGACGTTTT GAGCGTGCC GAT GGCG-GCTC TCTTTTTCTTGATGA TERM 1929 1454934 - 1454953 + G 79 -4.8 -5.1356 | opp_overlap 1454913, overlap 1454913 1454932 1454938 TCAAGGACGTTTTGA GCGTGCCG ATGG CGGCTCTC TTTTTCTTGATGAAC TERM 1930 1455538 - 1455525 - g 87 -3.1 -5.74122 | TAGCACAGAAAAAAA CTTAC TAGA GCAAG CATTGAAAGAGAGTC pspF 1454644 - 1455648 + | psp operon transcriptional activator TERM 1931 1455714 - 1455697 - f 100 -8.4 -6.32216 | ACAGACAAAAAAAAA GCCAGC ACCCGA GCTGGC TAGTAAAATAATACT TERM 1932 1455832 - 1455848 + F 100 -8.1 -5.33985 | TTGTAAAGCTTTTTA TTGAGAA TTT TTCTCAA TTTGTTTTTTTTGAC TERM 1933 1456590 - 1456600 + G 76 -4.6 -5.1244 | opp_overlap 1456584 GATTGGAAACCTGTA GGCT CAG GGCC TTTTTATCTTGATGA TERM 1934 1456948 - 1456974 + G 82 -8.6 -4.21462 | opp_overlap 1456965, overlap 1456949 TGGGATCTATTTATT ACGGTACGGCTG AAA CAGCCGCATCGG TTTTACCTCGTGCCT TERM 1935 1456949 - 1456973 + G 83 -12.1 -3.12395 | opp_overlap 1456965, overlap 1456948 GGGATCTATTTATTA CGGTACGGCTG AAA CAGCCGCATCG GTTTTACCTCGTGCC sapA 1455927 - 1457618 + | peptide transport periplasmic protein sapB 1457615 - 1458580 + | peptide transport system permease protein TERM 1936 1458628 - 1458604 - g 90 -3.6 -5.90231 | gap 1, opp_overlap 1458609, overlap 1458607 1458609 ATAAAGAGAAAAAAA CACCATCACCG GCTG CGGTGATT-TG GCAATGTTTTTCTAA TERM 1937 1458609 - 1458624 + G 76 -9 -3.64192 | opp_overlap 1458607 1458604 1458609 GAGAAAAAAACACCA TCACCG GCTG CGGTGA TTTGGCAATGTTTTT TERM 1938 1458624 - 1458609 - g 70 -9 -3.17457 | opp_overlap 1458609, overlap 1458607 1458604 GAGAAAAAAACACCA TCACCG GCTG CGGTGA TTTGGCAATGTTTTT sapC 1458567 - 1459460 + | peptide transport system permease protein sapD 1459460 - 1460461 + | peptide transport system ATP-binding protein sapF 1460451 - 1461260 + | peptide transport system ATP-binding protein TERM 1939 1461358 - 1461378 + F 80 -7.5 -4.16842 | ACAAATTTACAAATG TCGTGGTAG AAT CAGCCACGA TTTATTAACAATAAG fabI 1461469 - 1462257 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 1940 1462286 - 1462313 + F 100 -10 -5.1675 | opp_overlap 1462291, overlap 1462291 CATTACATTCTTTCT AAAAACCTCGAA ATTC TTCGAGGTTTTC TTTTTTCATGAATAA TERM 1941 1462308 - 1462291 - f 93 -9.9 -4.57073 | opp_overlap 1462291 1462286 CATTCTTTCTAAAAA CCTCGAA ATTC TTCGAGG TTTTCTTTTTTCATG TERM 1942 1462291 - 1462308 + F 100 -9.9 -5.45813 | opp_overlap 1462291, overlap 1462286 CATTCTTTCTAAAAA CCTCGAA ATTC TTCGAGG TTTTCTTTTTTCATG gst 1462476 - 1463087 + | glutathione S-transferase TERM 1943 1463153 - 1463121 - T 77 -8.6 -3.72374 | opp_overlap 1463127 1463149, overlap 1463127 TCTCATTAATAAACA TAAAAAGCGGAAAT TAATG ACTTCCGCTTTATA TTAACAATATGATTA TERM 1944 1463147 - 1463127 - T 91 -7.6 -5.28414 | opp_overlap 1463127, overlap 1463121 TAATAAACATAAAAA GCGGAAAT TAATG ACTTCCGC TTTATATTAACAATA TERM 1945 1463127 - 1463147 + T 70 -6.1 -4.19624 | opp_overlap 1463127 1463121 TAATAAACATAAAAA GCGGAAATT AAT GACTTCCGC TTTATATTAACAATA pdxY 1464035 - 1463166 - | pyridoxamine kinase TERM 1946 1464118 - 1464151 + r 87 -12 -2.71101 | gap 1, opp_overlap 1464125, overlap 1464120 1464125 TTTATTTATTGTTAT CAA-AAAAGGGCAAC CTACT GTTGCCCTTTTGTTG TCAATTATTTCCAGA TERM 1947 1464120 - 1464148 + r 85 -10.4 -3.49938 | opp_overlap 1464125, overlap 1464118 1464125 TATTTATTGTTATCA AAAAAGGGCAAC CTACT GTTGCCCTTTTG TTGTCAATTATTTCC TERM 1948 1464143 - 1464125 - R 100 -10.3 -5.14965 | opp_overlap 1464120 1464118 1464125 ATTGTTATCAAAAAA GGGCAAC CTACT GTTGCCC TTTTGTTGTCAATTA TERM 1949 1464125 - 1464143 + r 100 -10.3 -4.80959 | opp_overlap 1464125, overlap 1464120 1464118 ATTGTTATCAAAAAA GGGCAAC CTACT GTTGCCC TTTTGTTGTCAATTA tyrS 1465442 - 1464156 - | tyrosyl-tRNA synthetase TERM 1950 1464248 - 1464260 + g 82 -7.7 -4.62872 | CTTCAAAGACGTATT CAGGA TTA TCCTG TTTTTCGCCATTAAT TERM 1951 1464851 - 1464864 + g 73 -2.3 -5.33405 | overlap 1464852 AGCCACCAATTTGTA ACTCG ACAC CGAGG TTTTTGTTTAATGAC pdxH 1466214 - 1465561 - | pyridoxamine 5'-phosphate oxidase TERM 1952 1466072 - 1466106 + g 91 -9.4 -4.62069 | opp_overlap 1466080 1466093, overlap 1466074 CACATGGCAGTAGGA TCACTTAAGCGAGCTT CAC AAGCTTGCTTAAGCCA TTTTTCAAATAAAAC TERM 1953 1466074 - 1466104 + g 81 -12 -2.61831 | opp_overlap 1466080 1466093, overlap 1466072 CATGGCAGTAGGATC ACTTAAGCGAGCTT CAC AAGCTTGCTTAAGC CATTTTTCAAATAAA PMI1388 1467370 - 1466258 - | hypothetical protein TERM 1954 1467285 - 1467264 - G 80 -4.4 -5.1925 | opp_overlap 1467264 1467275 GGATAAGGTAAAAAA TGGTTGGC TTGTTG GGCAACCA GTTTATTACTAATGG TERM 1955 1467847 - 1467867 + G 73 -9.7 -3.24188 | opp_overlap 1467849 GTACAGGCCGTAACC TAGCAACCG CAG CGGGTGCTA TTGCTGGTGGTATGG slyB 1467591 - 1468058 + | outer membrane lipoprotein TERM 1956 1468118 - 1468086 - T 100 -15.1 -2.57344 | opp_overlap 1468086 1468091, overlap 1468091 GAGGTGTGTGATAAG CAAAACAGGCAACCA TTC TAGTTGCCTGTTTTA TTAATAGAAATTATT TERM 1957 1468086 - 1468118 + T 83 -10.7 -3.17486 | opp_overlap 1468086 1468091, overlap 1468091 GAGGTGTGTGATAAG CAAAACAGGCAACCA TTC TAGTTGCCTGTTTTA TTAATAGAAATTATT TERM 1958 1468091 - 1468113 + T 95 -10.6 -4.71426 | opp_overlap 1468086 1468091, overlap 1468086 GTGTGATAAGCAAAA CAGGCAACCA TTC TAGTTGCCTG TTTTATTAATAGAAA TERM 1959 1468113 - 1468091 - T 100 -12.8 -4.48987 | opp_overlap 1468091 1468086, overlap 1468086 GTGTGATAAGCAAAA CAGGCAACCA TTC TAGTTGCCTG TTTTATTAATAGAAA slyA 1468831 - 1468403 - | MarR-family transcriptional regulator PMI1391 1469533 - 1469294 - | hypothetical protein gloA 1469714 - 1470121 + | lactoylglutathione lyase TERM 1960 1470134 - 1470161 + F 83 -10.7 -3.34845 | opp_overlap 1470134 TAAATATTAGTAAAA CCAGAAAGGCA TTGTAT TGCTTTTCTGG TTCCTGATTATTATT TERM 1961 1470161 - 1470134 - f 88 -8.5 -4.37067 | opp_overlap 1470134 TAAATATTAGTAAAA CCAGAAAGGCA TTGTAT TGCTTTTCTGG TTCCTGATTATTATT TERM 1962 1470855 - 1470826 - g 81 -5.7 -5.01732 | overlap 1470830 AACCGCTGGAAAAAA TTAGGTGGTTGGC CACT ACCAACGCCCTAA TCAAACTTATGTGTT rnt 1470217 - 1470855 + | ribonuclease T TERM 1963 1470927 - 1470899 - T 100 -9.6 -5.31456 | opp_overlap 1470899 1470902 TTAAGCGACAAAAAA GAAGCCAGTGCA AATAA TGTACTGGCCTC TTTTTTTAATTACGG TERM 1964 1470899 - 1470927 + T 100 -9.6 -5.63103 | opp_overlap 1470899, overlap 1470902 TTAAGCGACAAAAAA GAAGCCAGTGCA AATAA TGTACTGGCCTC TTTTTTTAATTACGG TERM 1965 1470902 - 1470924 + T 82 -9.9 -3.25657 | opp_overlap 1470899, overlap 1470899 AGCGACAAAAAAGAA GCCAGTGCA AATAA TGTACTGGC CTCTTTTTTTAATTA PMI1394 1471315 - 1470977 - | glutaredoxin TERM 1966 1471250 - 1471274 + g 72 -3.5 -5.04868 | TGGTAATTTTGGTGA TCCTTTCATGT ATA ACAGGATGGGA TTTTCTTTGATTTGG PMI1395 1472055 - 1471720 - | hypothetical protein PMI1396 1472352 - 1473167 + | hypothetical protein sodB 1473407 - 1473985 + | superoxide dismutase [Fe] TERM 1967 1474026 - 1474056 + F 90 -11.3 -3.43931 | opp_overlap 1474028 1474031 1474035, overlap 1474028 1474031 1474035 CATTTTTGATAATCT AATAACAAAGGGC CTAGT GCCCTTTGTTATA TTGATATATTTGATT TERM 1968 1474028 - 1474054 + F 100 -13.9 -3.27662 | opp_overlap 1474028 1474031 1474035, overlap 1474026 1474031 1474035 TTTTTGATAATCTAA TAACAAAGGGC CTAGT GCCCTTTGTTA TATTGATATATTTGA TERM 1969 1474054 - 1474028 - f 100 -13.9 -3.23274 | opp_overlap 1474028 1474026 1474031 1474035, overlap 1474031 1474035 TTTTTGATAATCTAA TAACAAAGGGC CTAGT GCCCTTTGTTA TATTGATATATTTGA TERM 1970 1474031 - 1474051 + F 89 -11.2 -3.75655 | opp_overlap 1474031 1474028 1474035, overlap 1474028 1474026 1474035 TTGATAATCTAATAA CAAAGGGC CTAGT GCCCTTTG TTATATTGATATATT TERM 1971 1474051 - 1474031 - f 89 -11.2 -3.75766 | opp_overlap 1474028 1474026 1474031 1474035, overlap 1474028 1474035 TTGATAATCTAATAA CAAAGGGC CTAGT GCCCTTTG TTATATTGATATATT TERM 1972 1474035 - 1474047 + F 74 -6.2 -4.4768 | opp_overlap 1474031 1474028 1474035, overlap 1474031 1474028 1474026 TAATCTAATAACAAA GGGC CTAGT GCCC TTTGTTATATTGATA TERM 1973 1474047 - 1474035 - f 74 -6.2 -4.4846 | opp_overlap 1474035 1474031 1474028 1474026, overlap 1474031 1474028 TAATCTAATAACAAA GGGC CTAGT GCCC TTTGTTATATTGATA PMI1398 1474220 - 1474375 + | hypothetical protein TERM 1974 1474521 - 1474487 - g 70 -3.5 -4.90079 | gap 1, opp_overlap 1474503, overlap 1474489 ATGGCAACAATAAAA GACGTGG-CAAAACGC GCAG GCGTATCAACCACGAC TGTTTCTCATGTGAT purR 1474472 - 1475497 + | purine nucleotide synthesis repressor (LacI-family transcriptional regulator) PMI1400 1476409 - 1475507 - | LysR-family transcriptional regulator TERM 1975 1475593 - 1475626 + g 75 -9.6 -3.41602 | opp_overlap 1475593 ATTCGCTTTTATCAA CCCATGTTAGACAG CACGGA CTGTCTGGCAAGGG TTGTGCTAAGGTAAG TERM 1976 1476873 - 1476889 + G 73 -7.9 -3.90744 | overlap 1476864 CTTACAAGCCTTTGG CGTCTGC TCT GCAGCCG TTATTTGGCAAGCAC TERM 1977 1476988 - 1477004 + G 75 -5.8 -4.66537 | CTTTCCCCAGCCTTA GCGCCA CTCAT TGGTGC TTTTCTGTTAAACCA PMI1401 1476529 - 1477746 + | MFS-family transporter TERM 1978 1477802 - 1477782 - f 100 -9.8 -5.08011 | opp_overlap 1477782 AAAATTCTTAAAAAA GGCCATTT ATATA AAATGGCC TTTTTATTTTCTAGA TERM 1979 1477782 - 1477802 + F 100 -9.8 -5.54907 | opp_overlap 1477782 AAAATTCTTAAAAAA GGCCATTT ATATA AAATGGCC TTTTTATTTTCTAGA cfa 1478049 - 1479203 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 1980 1479258 - 1479230 - T 100 -12.6 -4.74453 | opp_overlap 1479230 CAATAGAGGTAAAAA TCCCGTTTTCCA TAGAC TGAAAAACGGGA TTTTTTAATTCTAGT TERM 1981 1479230 - 1479258 + T 100 -10.4 -5.33848 | opp_overlap 1479230 CAATAGAGGTAAAAA TCCCGTTTTCCA TAGAC TGAAAAACGGGA TTTTTTAATTCTAGT ribE 1479949 - 1479293 - | riboflavin synthase alpha chain mdtK 1480253 - 1481626 + | multidrug resistance protein pykF 1482432 - 1483844 + | pyruvate kinase TERM 1982 1483908 - 1483877 - T 83 -5.8 -5.26875 | opp_overlap 1483882, overlap 1483878 1483882 TTTGTAATTAAAAAA TTTAAGCCATCCGT TTTA ACGGATGGCTTTTT TATCGCTACTTTTTT TERM 1983 1483907 - 1483878 - T 80 -9.3 -3.75402 | opp_overlap 1483882, overlap 1483877 1483882 TTGTAATTAAAAAAT TTAAGCCATCCGT TTTA ACGGATGGCTTTT TTATCGCTACTTTTT TERM 1984 1483882 - 1483903 + T 100 -14.5 -5.28778 | opp_overlap 1483878 1483877 1483882 AATTAAAAAATTTAA GCCATCCGT TTTA ACGGATGGC TTTTTTATCGCTACT TERM 1985 1483903 - 1483882 - T 100 -14.5 -3.54687 | opp_overlap 1483882, overlap 1483878 1483877 AATTAAAAAATTTAA GCCATCCGT TTTA ACGGATGGC TTTTTTATCGCTACT gadC 1485512 - 1483959 - | probable glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) TERM 1986 1485593 - 1485563 - R 100 -13.4 -3.49618 | opp_overlap 1485563 TGTGCAGATAATCAA GGCTGGAGAAAAAG AGT CTATTTCTCCAACC TATTACCAAATAAAA TERM 1987 1485563 - 1485593 + r 84 -11.2 -3.03124 | opp_overlap 1485563 TGTGCAGATAATCAA GGCTGGAGAAAAAG AGT CTATTTCTCCAACC TATTACCAAATAAAA gadB 1487008 - 1485617 - | glutamate decarboxylase beta TERM 1988 1486571 - 1486591 + g 72 -3.2 -5.03145 | opp_overlap 1486588, overlap 1486583 ATTAGGTTTATCTGT CGCTTTTC CAGCA GCAAGGCG TTTTTTACGCCATTG PMI1408 1487412 - 1488464 + | conjugated bile acid hydrolase TERM 1989 1488930 - 1488911 - g 70 -5.7 -4.41895 | overlap 1488927 AACGCTCAAGCAAAA GCCGCTT ATGATG AAGCAGC TCGTGCTAATCAGCG lpp 1488740 - 1488979 + | major outer membrane lipoprotein (murein-lipoprotein) TERM 1990 1489056 - 1489034 - T 100 -11.4 -5.3321 | opp_overlap 1489034 AATTAATAATAAAAA GCAGATACCT ATG AAGTATCTGC TTTTTTTCATCATTG TERM 1991 1489034 - 1489056 + T 100 -9.2 -5.58074 | opp_overlap 1489034 AATTAATAATAAAAA GCAGATACCT ATG AAGTATCTGC TTTTTTTCATCATTG PMI1410 1490000 - 1489083 - | peptidoglycan-binding protein sufE 1490546 - 1490118 - | cysteine desulfuration protein sufS 1491809 - 1490568 - | cysteine desulfurase (selenocysteine lyase) TERM 1992 1491496 - 1491462 - G 72 -10.2 -2.72096 | overlap 1491455 1491461 TTCAGTAATGATAAT GTTATCACCATCATTT AGG AAACGATGGCTATAAC TGTAAGCGACTAAAT TERM 1993 1491615 - 1491672 + g 83 -9.4 -3.91506 | gap 2, overlap 1491633 1491635 CACTAAGGTGGTGGC GTTTGCACTTAATGTGTGAATGCCGCGG TGAA CCGCGGCATAT-TGTGTTAAG-GCAAAC TGTTTTTCACGCTCC TERM 1994 1491633 - 1491656 + g 90 -12.4 -3.65812 | overlap 1491615 1491635 TGCACTTAATGTGTG AATGCCGCGG TGAA CCGCGGCATA TTGTGTTAAGGCAAA TERM 1995 1491635 - 1491654 + g 100 -15 -3.41024 | overlap 1491633 1491615 CACTTAATGTGTGAA TGCCGCGG TGAA CCGCGGCA TATTGTGTTAAGGCA sufD 1493123 - 1491816 - | subunit of cysteine desulfurase activator complex sufC 1493844 - 1493098 - | probable ATP-binding component of cysteine desulfurase (ATP-dependent transporter) TERM 1996 1493692 - 1493715 + gr 74 -9.6 -2.75838 | overlap 1493689 ATCAACTTCATACTC TTCGCGACCT GCTA AGGTTGCGGA TAATGTACTTTTACC TERM 1997 1493896 - 1493878 - R 72 -9 -2.63382 | opp_overlap 1493871, overlap 1493877 TTTTATACCCAGAAT TTGGTTAA TGG TTAACCAA CGCTATGTTCTAAGC sufB 1495385 - 1493889 - | component of cysteine desulfurase activator complex TERM 1998 1494402 - 1494383 - G 70 -7.9 -3.65812 | CTCCTTTTAAGATAA CACTTGG GTATTT CCAAGTG ATCGCTGAACCTGTT sufA 1495771 - 1495403 - | scaffold protein for iron-sulfur cluster assembly TERM 1999 1495653 - 1495667 + g 93 -10 -4.86001 | opp_overlap 1495646 1495652 1495651 ATACTTAAGGAAAGT CCCTGA CTT TCAGGG TTTTTCTCCACTAAT TERM 2000 1496084 - 1496074 - R 77 -4 -5.47914 | overlap 1496078 AAAAAGCATAAAAAA TCAA CAA TTGA TAATCGCAAAATATT PMI1417 1496790 - 1496179 - | lipoprotein TERM 2001 1496921 - 1496893 - R 100 -8.2 -5.80003 | opp_overlap 1496891 1496886 1496893 TCAATAAATAAAAAA CGCCTAAAGTGA AATAA TAACCTTAGGCG TCTATTATTAATTAA PMI1418 1497354 - 1496941 - | thioesterase PMI1419 1500407 - 1497351 - | FAD-binding oxidase (flavoprotein) TERM 2002 1500588 - 1500598 + H 74 -5.4 -4.75472 | CCATGTTTATTCATC TGCT TTT AGCA TTTTATTCGTGTAGG PMI1420 1500625 - 1501737 + | hypothetical protein TERM 2003 1501774 - 1501749 - T 100 -11.3 -4.84673 | opp_overlap 1501749 1501772 GTAAATAATATAAAA GCATGTAAGTA TCAA CACTTACATGC TTTATAAGTATTACT TERM 2004 1501749 - 1501774 + T 91 -10.6 -3.98172 | opp_overlap 1501749, overlap 1501772 GTAAATAATATAAAA GCATGTAAGT ATCAAC ACTTACATGC TTTATAAGTATTACT TERM 2005 1502087 - 1502107 + T 100 -7.6 -6.32216 | CTGTGTGTAGTCTTT GCCTGTCA GCCCA TGATAGGC TTTTTTTTTATCTAT TERM 2006 1502165 - 1502146 - T 100 -7.9 -5.70829 | opp_overlap 1502141 1502146 AATAGTATAAAAAAA GCTCACA TTATTT TGTGAGC TTTTAATTATTCAAT TERM 2007 1502146 - 1502165 + T 82 -7.9 -4.56736 | opp_overlap 1502146, overlap 1502141 AATAGTATAAAAAAA GCTCACA TTATTT TGTGAGC TTTTAATTATTCAAT ppsA 1504566 - 1502191 - | phosphoenolpyruvate synthase TERM 2008 1505019 - 1505005 - g 81 -2.7 -5.68039 | opp_overlap 1505005 AAATTTATAAAAAAA GTGGC GCCAA GCCTC TGGTTTTCTACTCTA PMI1422 1504785 - 1505651 + | hypothetical protein aroH 1505772 - 1506821 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2009 1506851 - 1506834 - f 79 -7 -4.62302 | opp_overlap 1506834, overlap 1506825 TAATATCGCCAAAAA GGAGAG TTTTAC CTCTCC TTTTTAACTTACACA TERM 2010 1506834 - 1506851 + F 83 -7 -4.74103 | opp_overlap 1506825 1506834 TAATATCGCCAAAAA GGAGAG TTTTAC CTCTCC TTTTTAACTTACACA PMI1424 1507078 - 1507260 + | hemin uptake protein TERM 2011 1508663 - 1508649 - g 85 -4.2 -5.65927 | GACTTAAATAAAAAA GGAGAC ATG ACCTCC GCCGACAAATATCAA hmuR1 1507335 - 1509569 + | hemin receptor TERM 2012 1509602 - 1509623 + F 72 -8.7 -3.14848 | opp_overlap 1509602 1509601, overlap 1509601 GATTTTTATCATAAC GGGCTGTTG AGTT TAGCAGCCC ATTTTAATAACGGAG hmuR2 1509649 - 1511691 + | hemin receptor TERM 2013 1511788 - 1511778 - g 100 -5.4 -6.11019 | AAAAATGAAAAAAAA GCAT CTT ATGC GCGTGATTTAGCAAC hmuS 1511685 - 1512776 + | hemin transport protein hmuT 1512792 - 1513607 + | hemin-binding periplasmic protein TERM 2014 1513970 - 1513987 + GF 78 -9.8 -3.21416 | opp_overlap 1513968 TACAGTCATATTATT GCCGCC TTTATT GGCGGC TTAATAGTGGCAATG hmuU 1513607 - 1514611 + | hemin transport system permease protein HmuU hmuV 1514572 - 1515402 + | hemin transport system ATP-binding protein TERM 2015 1515450 - 1515418 - T 93 -9.9 -4.57514 | opp_overlap 1515418 1515421 ATAATAAAAGAGAAA GGACTGAGTCCTG TTGAATG CAGAGCTCAGTCC TTAAAAGACGCTTAA PMI1431 1515979 - 1515512 - | AsnC-family transcriptional regulator PMI1432 1516140 - 1516751 + | LysE-type transporter PMI1433 1518249 - 1516834 - | GntR-family transcriptional regulator PMI1434 1518398 - 1519732 + | cytochrome oxidase subunit I PMI1435 1519722 - 1520729 + | cytochrome oxidase subunit II PMI1436 1520710 - 1520871 + | hypothetical protein TERM 2016 1520920 - 1520896 - f 100 -13 -5.10767 | opp_overlap 1520896 1520900 CAGGTAATATAAAAA TAAAGCGGGA TAAAT TCCCGCTTTA TTTTAGTTAAAAAAA TERM 2017 1520896 - 1520920 + F 100 -13 -4.4078 | opp_overlap 1520896, overlap 1520900 CAGGTAATATAAAAA TAAAGCGGGA TAAAT TCCCGCTTTA TTTTAGTTAAAAAAA TERM 2018 1520900 - 1520916 + F 100 -9.4 -4.78077 | opp_overlap 1520896, overlap 1520896 TAATATAAAAATAAA GCGGGA TAAAT TCCCGC TTTATTTTAGTTAAA PMI1437 1521159 - 1522019 + | iron utilization protein TERM 2019 1522052 - 1522086 + F 100 -12.4 -4.84359 | CGAGTTGGCTGTACC GGCAGCATATTAAG ACCCTCA TTTAATATGCTGCC TTTTTATAGGAATGA PMI1438 1522540 - 1522923 + | hypothetical protein TERM 2020 1522943 - 1522988 + T 95 -12.3 -3.68709 | opp_overlap 1522949 1522951 TAATTAATTTCTATC TTAATACAGTGAGTAAACTAT TTAT ATAATTTACTTACTGTATTGA TTCTCCTTTCTCTTA TERM 2021 1522982 - 1522949 - T 74 -9.1 -3.05963 | opp_overlap 1522943, overlap 1522951 ATTTCTATCTTAATA CAGTGAGTAAACTAT TTAT ATAATTTACTTACTG TATTGATTCTCCTTT TERM 2022 1523130 - 1523164 + T 100 -12.5 -5.5353 | gap 1 TGAATGTTTTTTATC GGCAGCATATTAA-TA CTCT TATTTAATATGCTGCC TTTTTTATTGCTATG phoH 1523978 - 1523193 - | PhoH protein (phosphate starvation-inducible protein PsiH) TERM 2023 1523923 - 1523933 + g 75 -5.4 -4.83243 | overlap 1523906 TTACGTTGCTCTTTA CGTA ATG TACG TTTATTTTCTCTACG TERM 2024 1524136 - 1524088 - H 86 -4 -5.86976 | gap 2, opp_overlap 1524101 1524113 1524121 1524125 GTAGAAAACAAAAAA GCCGGTCACAAACTTGAGCATTAA ACA TCAATGCACA-G-TTGCTACCAGC TTTGTCTTGGTGATT TERM 2025 1524752 - 1524727 - g 80 -11.1 -3.28924 | overlap 1524728 GAGCGGTTTCCACAA GCGTGGCGACA ATAT TGCCGCCACGT TCGACGCTGGATATA TERM 2026 1524751 - 1524728 - g 95 -14.6 -2.57211 | overlap 1524727 AGCGGTTTCCACAAG CGTGGCGACA ATAT TGCCGCCACG TTCGACGCTGGATAT PMI1440 1524325 - 1524768 + | hypothetical protein endA 1525756 - 1524779 - | endonuclease I precursor PMI1442 1525918 - 1526193 + | hypothetical protein PMI1443 1526672 - 1526199 - | hypothetical protein PMI1444 1527466 - 1526663 - | hypothetical protein TERM 2027 1527095 - 1527079 - G 75 -8.1 -4.06611 | opp_overlap 1527084 CAACCATAACAATAA TTATCCA ACG TGGATAA CGTAGTGGTTTGATA PMI1445 1528483 - 1527656 - | hypothetical protein TERM 2028 1528342 - 1528358 + g 76 -2.2 -5.4505 | overlap 1528343 CAATAACCCAATACT GTTCCC AACTA GGAAAC TTTTTTCTTAAAAAA PMI1446 1529564 - 1528470 - | hypothetical protein TERM 2029 1529152 - 1529172 + g 79 -3.4 -5.38549 | TTATTTTCACTAGAT GGAAAATA TAATT TATTTTTC TTTTTATTATTTGAA TERM 2030 1529740 - 1529704 - R 80 -9.8 -3.54741 | gap 1, opp_overlap 1529703 1529706 1529715, overlap 1529707 1529715 TATTACGCTTTCAAA TTA-GTATAAAAGCACC TTAG GATGCTTTTATACCTAA CTTAACTTATTCATA TERM 2031 1529736 - 1529707 - R 100 -13.1 -2.90813 | opp_overlap 1529706 1529703 1529715, overlap 1529704 1529715 TACGCTTTCAAATTA GTATAAAAGCACC TTAG GATGCTTTTATAC CTAACTTAACTTATT PMI1447 1530178 - 1529768 - | hypothetical protein TERM 2032 1530625 - 1530611 - g 70 -3.6 -4.90266 | opp_overlap 1530611 GTTATCAACTAAAAA TGATAA TGG CTATCA TCGTTCTCATTGGAA PMI1448 1530498 - 1531169 + | lipoprotein TERM 2033 1531246 - 1531223 - T 82 -9.6 -3.72324 | opp_overlap 1531223 TAGTTTGATTAATAA GGAGATAGTG TTAC CTCTATCTCC TTTTATACCATATTA TERM 2034 1531223 - 1531246 + T 91 -9.6 -4.42619 | opp_overlap 1531223 TAGTTTGATTAATAA GGAGATAGTG TTAC CTCTATCTCC TTTTATACCATATTA uspG1 1531734 - 1531297 - | universal stress protein G PMI1450 1532139 - 1531801 - | hypothetical protein TERM 2035 1532240 - 1532217 - R 100 -11.2 -5.63645 | opp_overlap 1532219 TTAAAAGAGAAAAAA TAGGTTATGA AACC TCATAACCTA TTAGCATGTGTCAAT TERM 2036 1532219 - 1532238 + r 76 -9.4 -3.08934 | opp_overlap 1532217 AAAAGAGAAAAAATA GGTTATGA AACC TCATAACC TATTAGCATGTGTCA uspG2 1532683 - 1532255 - | universal stress protein G PMI1452 1533720 - 1532830 - | hypothetical protein PMI1453 1534011 - 1534232 + | hypothetical protein TERM 2037 1534375 - 1534398 + F 100 -9.6 -5.76633 | opp_overlap 1534373, overlap 1534376 TTTATTCATTTAACT GCCCCTCTAT TGTT ATAGAGGGGA TTTTTTTATCTGTAA TERM 2038 1534376 - 1534397 + F 100 -13.1 -4.04353 | opp_overlap 1534373, overlap 1534375 TTATTCATTTAACTG CCCCTCTAT TGTT ATAGAGGGG ATTTTTTTATCTGTA PMI1454 1534499 - 1534873 + | hypothetical protein TERM 2039 1534913 - 1534932 + F 100 -6.4 -5.7946 | opp_overlap 1534915 AGCGCAGAGTCCAAG GAGCAGAA ATAA TCCTGCTC TTTTTTTATTAAAAC TERM 2040 1535648 - 1535661 + G 71 -6.7 -4.0274 | AGATCAAGCAGGATT TACCG ATAC CGGTA TTGTTTCCTACTCAA hemB 1535091 - 1536068 + | delta-aminolevulinic acid dehydratase TERM 2041 1536166 - 1536195 + F 95 -10.3 -4.61633 | opp_overlap 1536166 GTTAGATACGCTAAA TACTTCAAGTTAT AACG ATAATTTGAAGTA TTTTTCACCCTATAT TERM 2042 1536195 - 1536166 - f 75 -8.1 -3.65425 | opp_overlap 1536166 GTTAGATACGCTAAA TACTTCAAGTTAT AACG ATAATTTGAAGTA TTTTTCACCCTATAT TERM 2043 1536449 - 1536477 + G 81 -5.4 -5.08011 | gap 2, opp_overlap 1536449 AAATCCTAGATAAAA CATTCCCAGATGTG TCA CGCA-C-GGGAATG TTTTTTGAAGGTTTT PMI1456 1536223 - 1536687 + | hypothetical protein TERM 2044 1536750 - 1536714 - T 89 -12.6 -2.65056 | opp_overlap 1536717 1536720, overlap 1536707 1536717 1536720 ATAATAAACTAATAG CAATAACGGATAAGCA TTTAT TACTTATCCGTTATTA GTTAATATTGCACAA TERM 2045 1536717 - 1536747 + T 84 -9.9 -3.45768 | opp_overlap 1536714 1536707 1536717 1536720, overlap 1536720 ATAAACTAATAGCAA TAACGGATAAGCA TTTAT TACTTATCCGTTA TTAGTTAATATTGCA TERM 2046 1536747 - 1536717 - T 91 -12.1 -3.44936 | opp_overlap 1536717 1536720, overlap 1536714 1536707 1536720 ATAAACTAATAGCAA TAACGGATAAGCA TTTAT TACTTATCCGTTA TTAGTTAATATTGCA TERM 2047 1536720 - 1536744 + T 72 -7.2 -3.85518 | opp_overlap 1536717 1536714 1536707 1536720, overlap 1536717 AACTAATAGCAATAA CGGATAAGCA TTTAT TACTTATCCG TTATTAGTTAATATT TERM 2048 1536744 - 1536720 - T 83 -9.4 -3.83758 | opp_overlap 1536720 1536717, overlap 1536717 1536714 1536707 AACTAATAGCAATAA CGGATAAGCA TTTAT TACTTATCCG TTATTAGTTAATATT codA 1538050 - 1536773 - | cytosine deaminase codB 1539290 - 1538040 - | cytosine permease TERM 2049 1538609 - 1538599 - G 79 -3.2 -5.4505 | overlap 1538608 TTTCCTAAGAAAAAA GCCA CAA TAGC GACAATCACGGCAAT TERM 2050 1539432 - 1539414 - R 85 -3.2 -6.02914 | opp_overlap 1539427 GTGATAGAAAAAAAA TTGATATA TCT CACATCAA TCCTGATGTTATGGT TERM 2051 1539635 - 1539652 + r 74 -8.5 -3.28217 | opp_overlap 1539635 TTCAGTCACAAAAAA GAGGAAT TTTC ATTCCTC TTGACTATTGTTTTG TERM 2052 1539652 - 1539635 - R 95 -8.5 -5.28176 | opp_overlap 1539635 TTCAGTCACAAAAAA GAGGAAT TTTC ATTCCTC TTGACTATTGTTTTG betA 1541344 - 1539677 - | choline dehydrogenase betB 1542865 - 1541390 - | betaine aldehyde dehydrogenase TERM 2053 1541952 - 1541962 + g 70 -5.4 -4.31549 | CGCTCAATGATTTTA GCTT CAA AAGC TTGTTTTAACTTTTC betI 1543492 - 1542890 - | TetR-family transcriptional regulator TERM 2054 1543036 - 1543017 - G 70 -7.8 -3.78312 | opp_overlap 1543013 AAACCATCGATTAAA GCGGCCAA GCCT TTGGCGGC TAAGCGTGCTTTATC TERM 2055 1544160 - 1544107 - g 73 -8.1 -3.90464 | gap 1, opp_overlap 1544107 1544110, overlap 1544108 1544110 GGTGAAACAATAGAA GCAGCCCGTCAGTCGATGGTGTGGAC ATT ATTC-CACTATGGCCTGACGGGCTGG TCTATGTATGCACTG TERM 2056 1544107 - 1544160 + G 82 -11.8 -3.05498 | gap 1, opp_overlap 1544107 1544108 1544110, overlap 1544110 GGTGAAACAATAGAA GCAGCCCGTCAGTCGATGGTGTGGA CATTA TTC-CACTATGGCCTGACGGGCTGG TCTATGTATGCACTG TERM 2057 1544159 - 1544108 - g 81 -11.6 -2.93555 | gap 1, opp_overlap 1544107 1544110, overlap 1544107 1544110 GTGAAACAATAGAAG CAGCCCGTCAGTCGATGGTGTGGAC ATT ATTC-CACTATGGCCTGACGGGCTG GTCTATGTATGCACT TERM 2058 1544110 - 1544157 + G 81 -12.1 -2.74597 | gap 1, opp_overlap 1544110 1544108 1544107, overlap 1544107 GAAACAATAGAAGCA GCCCGTCAGTCGATGGTGTGGA CATTA TTC-CACTATGGCCTGACGGGC TGGTCTATGTATGCA betT 1543702 - 1545744 + | high-affinity choline transport protein TERM 2059 1545773 - 1545795 + F 100 -8.4 -5.46657 | TATCTTATCTCTCAA GGGAACCCGT TTT ATCGGTTCCC TTTTTTATTAGCCTG PMI1463 1546004 - 1547161 + | aminotransferase TERM 2060 1547214 - 1547197 - T 74 -7 -4.22346 | opp_overlap 1547197 TAAATGTATTTAAAA GGGAAC GACACA GTTCCC TTGTTATTTACAGAT TERM 2061 1547197 - 1547214 + T 71 -7 -4.08958 | opp_overlap 1547197 TAAATGTATTTAAAA GGGAAC GACACA GTTCCC TTGTTATTTACAGAT PMI1464 1547779 - 1547222 - | fimbrial subunit PMI1465 1548832 - 1547798 - | fimbrial adhesin PMI1466 1551423 - 1548820 - | fimbrial outer membrane usher protein PMI1467 1552149 - 1551457 - | fimbrial chaperone protein PMI1468 1552716 - 1552174 - | fimbrial subunit TERM 2062 1552465 - 1552490 + g 70 -3.3 -4.85599 | opp_overlap 1552465 AATACTTTTATTACA TCCCATTAATT TAAT AAAAAATGGGA TTTTTATAGAGTGAC TERM 2063 1552730 - 1552762 + r 82 -10.8 -2.52234 | opp_overlap 1552735, overlap 1552735 1552760 1552760 ATATTTCCCTCGATA TAAAAGTATGACCT TTATC AGGTCATACTTTAA ATTAATCCAATTTAT TERM 2064 1552735 - 1552757 + r 89 -10.7 -3.78329 | opp_overlap 1552735, overlap 1552730 TCCCTCGATATAAAA GTATGACCT TTATC AGGTCATAC TTTAAATTAATCCAA TERM 2065 1552757 - 1552735 - R 95 -10.7 -4.52589 | opp_overlap 1552735 1552730 TCCCTCGATATAAAA GTATGACCT TTATC AGGTCATAC TTTAAATTAATCCAA PMI1469 1553338 - 1552778 - | fimbrial subunit TERM 2066 1552923 - 1552912 - G 80 -4.4 -5.24129 | overlap 1552892 TTGCTGTAGAAAAAA CAGA GCCG TCTG GTGGTAACACTTTTC TERM 2067 1553538 - 1553488 - R 70 -6.4 -4.2528 | opp_overlap 1553499, overlap 1553491 1553499 GGGTAATTTAATAAA CATTAAATAAATAGGGTTTTAATT TTA AATAAAATCCCTATTAATTCATTG ATATACTTAATATAC TERM 2068 1553527 - 1553499 - R 76 -6.1 -4.59293 | opp_overlap 1553499, overlap 1553491 1553488 TAAACATTAAATAAA TAGGGTTTTAATT TTA AATAAAATCCCTA TTAATTCATTGATAT PMI1470 1553919 - 1553584 - | fimbrial operon regulator TERM 2069 1553745 - 1553765 + g 76 -6.9 -4.44667 | TAGGTATTTTATTTA TTCCTCGTT CAT AACGAGAAA TTTGTTGTTGAGAGA TERM 2070 1554177 - 1554203 + r 81 -3.2 -5.80727 | opp_overlap 1554179, overlap 1554179 1554193 AATGAAAACATATTA AATTTTTATTAA TTT TTAATAGAAATA TTTTTTATTGTTTTT TERM 2071 1554179 - 1554201 + r 72 -5.8 -4.47161 | opp_overlap 1554179, overlap 1554177 1554193 TGAAAACATATTAAA TTTTTATTAA TTT TTAATAGAAA TATTTTTTATTGTTT TERM 2072 1554351 - 1554364 + r 72 -2.5 -5.36018 | AATTTTTACTTGATA TAAAT TAAT ATTTA TTTATTTTTTTTGGT TERM 2073 1554564 - 1554554 - R 77 -4 -5.50499 | TCATATTTAAAAAAA TGAT AAT ATCA AATAGAAAATAAATT TERM 2074 1554594 - 1554574 - R 72 -4.9 -4.83032 | opp_overlap 1554578 1554593 1554593, overlap 1554578 1554593 ATATCAAATAGAAAA TAAATTTTT AGA AAAAATCTA TTACAAATAAGTTTA TERM 2075 1554657 - 1554678 + r 100 -8.7 -5.49569 | opp_overlap 1554657 ATATATAAAGAAAAA GGGCCTGAA TAAA TTCAGACCC TTTTTTCTATTAATA TERM 2076 1554678 - 1554657 - R 100 -10.9 -5.4433 | opp_overlap 1554657 ATATATAAAGAAAAA GGGCCTGAA TAAA TTCAGACCC TTTTTTCTATTAATA oppF 1555716 - 1554709 - | oligopeptide ABC transporter, ATP-binding protein oppD 1556702 - 1555713 - | oligopeptide ABC transporter, ATP-binding protein TERM 2077 1556594 - 1556607 + g 71 -6.7 -4.01158 | opp_overlap 1556594 TTTCCCCTGCAGATA GCTCA AAGT TGAGC TTATTTACTGCGGTT oppC 1557618 - 1556710 - | oligopeptide ABC transporter, permease protein TERM 2078 1557491 - 1557481 - G 71 -4 -4.93333 | AAGTAAAATACAAAA TAGT AGT ACTA GGCTGGTGATCGCCG oppB 1558557 - 1557637 - | oligopeptide ABC transporter, permease protein TERM 2079 1557709 - 1557699 - G 79 -5.4 -4.93877 | TGGCATTAAATAAAA TGGT TAA ACCA CCCACAATAATGGTT TERM 2080 1558146 - 1558169 + g 90 -13.2 -2.81966 | opp_overlap 1558144 1558143 TCGGTATCACAACCC CCGTCATGGC AAAT GTCATGACGG TATAATCCCATTTGG TERM 2081 1558288 - 1558311 + g 80 -8.2 -4.32857 | overlap 1558281 AGGGAATGCTTTACC GACTAAAGTG TTAA CACTGTAGTC TTTATATTTAAAAGA TERM 2082 1558627 - 1558603 - R 100 -13.7 -4.82901 | overlap 1558620 GCGTGGTGATAAAAA GACCTCGCTTA ACT TAAGCAAGGTC TCGCCCGATTATTTA oppA 1560273 - 1558636 - | oligopeptide ABC transporter, oligopeptide-binding protein TERM 2083 1558851 - 1558861 + g 71 -4 -4.91109 | CTTTCATATACGCAT CAAA TTG TTTG TTTTTATAGTGAACG TERM 2084 1559057 - 1559070 + g 82 -3.7 -5.38047 | opp_overlap 1559056 1559057 TTCCAAATAGAAGAG GCCGC AATC GCGAC TTTTTTATGTAGATC TERM 2085 1560124 - 1560136 + g 70 -7.7 -3.62597 | opp_overlap 1560117 AGGATCAAGTGATTG TGGCT CAG AGCCA TTATTACGCACTAAC oppA2 1562180 - 1560540 - | oligopeptide ABC transporter, oligopeptide-binding protein TERM 2086 1562623 - 1562605 - R 74 -6 -4.64159 | opp_overlap 1562618, overlap 1562618 ATAAACAATAACAAA TCTGTCTT TAA ATGACAGA AACTGGCTAATCTAA TERM 2087 1562653 - 1562674 + r 80 -6.1 -4.86385 | opp_overlap 1562656 AAAATAACGGTAGAT TAATAAAAA AACA TTTTTATTA TTTGTTTTTAAAAAT TERM 2088 1562761 - 1562794 + r 71 -8.4 -3.33261 | opp_overlap 1562761 GAATTAGCAAAAAAA TATCCTTTATCGTT GTTATG AACCATAAAGGATA TTCTGAGCGTTAGCC TERM 2089 1562794 - 1562761 - R 100 -8.4 -5.58074 | opp_overlap 1562761 GAATTAGCAAAAAAA TATCCTTTATCGTT GTTATG AACCATAAAGGATA TTCTGAGCGTTAGCC cysG 1564213 - 1562831 - | siroheme synthase [includes: uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase] TERM 2090 1563089 - 1563079 - G 89 -5.4 -5.36441 | opp_overlap 1563079 GCCCCATATAAAAAA CCAA AGT TTGG TTATCTTGTGCGATA TERM 2091 1563167 - 1563153 - G 80 -6.4 -4.71426 | overlap 1563154 TGCCCAGTAATAAAA CGCACA CTT TGTGCA TAATCCCGATGTGTT TERM 2092 1563318 - 1563298 - G 74 -4.8 -4.72272 | TTCCTCGACCAAAAA TAAAAGGA TCACC CCCTTTTA ACCTCACTACCCTTT nirD 1564571 - 1564239 - | nitrite reductase [NAD(P)H] small subunit nirB 1567114 - 1564568 - | nitrite reductase [NAD(P)H] large subunit TERM 2093 1567233 - 1567248 + H 80 -6.2 -4.76123 | opp_overlap 1567232 1567235 TAATAGTCAACATAT TACTAC CAAA GTAGTA TTTTATTCGTCGTTT TERM 2094 1567499 - 1567526 + G 72 -8.5 -3.47322 | TGCTCTCAGTGCCCC TGTATTGGCAG CAACAC CCGCCAATACA TTGATTGTAGTACAA TERM 2095 1567750 - 1567728 - g 71 -6.2 -4.19735 | overlap 1567730 GTCTTTAAAATTAAA CAGGATGCAA AAT TTGCCTCCGG TAATAGCGTACGCCC PMI1480 1567443 - 1569014 + | ABC transporter, substrate binding protein TERM 2096 1569028 - 1569058 + F 88 -9.2 -4.18259 | gap 1, overlap 1569026 1569029 GATCATTTTCCTGCC G-CCACTCACAAT CATGTT ATTGTGAGTGGTC TATTTTTTGCGATTT TERM 2097 1569029 - 1569056 + F 100 -12.9 -3.66769 | overlap 1569028 1569026 ATCATTTTCCTGCCG CCACTCACAAT CATGTT ATTGTGAGTGG TCTATTTTTTGCGAT TERM 2098 1569133 - 1569149 + G 72 -9.5 -3.09492 | overlap 1569135 AAAAAGCCAGTTGTT TACCTTG GTT CAAGGTA TATTGACATTGGCGC PMI1481 1569089 - 1570129 + | ABC transporter, permease protein PMI1482 1570129 - 1570959 + | ABC transporter, permease protein TERM 2099 1571669 - 1571645 - g 73 -9.4 -3.19157 | GAGCAAGTGGATGAA CTTGAGGCAA AAGCA TTACCTCAAG CCACACATCCATACA PMI1483 1570952 - 1571788 + | ABC transporter, ATP-binding protein TERM 2100 1572378 - 1572353 - g 73 -8.3 -3.6793 | overlap 1572347 AAAAAAACAGCATAA CATGACTTACC TTTT GGTCAGCCATG ATGCAGATGTTATTG PMI1484 1571778 - 1572491 + | ABC transporter, ATP-binding protein TERM 2101 1572533 - 1572563 + T 71 -8.4 -3.27923 | opp_overlap 1572529 1572535, overlap 1572535 AAAGAGAGAAATGAT AAGAGCAGTATTAA ATA TCAATACTGCTCTA TTGGTAATATTACAC TERM 2102 1572535 - 1572561 + T 85 -11 -3.20307 | opp_overlap 1572529 1572535, overlap 1572533 AGAGAGAAATGATAA GAGCAGTATTAA ATA TCAATACTGCTC TATTGGTAATATTAC TERM 2103 1572561 - 1572535 - T 100 -13.2 -3.67705 | opp_overlap 1572535 1572533, overlap 1572529 AGAGAGAAATGATAA GAGCAGTATTAA ATA TCAATACTGCTC TATTGGTAATATTAC PMI1485 1573228 - 1572584 - | hypothetical protein adhE 1573743 - 1576406 + | aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] TERM 2104 1576463 - 1576488 + T 100 -14.9 -4.61868 | opp_overlap 1576468, overlap 1576468 ATGATTGCTTTACTA TAAAACCAGCC ACAA GGCTGGTTTTA TTTTGTCTATCAATG TERM 2105 1576483 - 1576468 - T 95 -10.4 -4.46212 | opp_overlap 1576463 1576468 TGCTTTACTATAAAA CCAGCC ACAA GGCTGG TTTTATTTTGTCTAT TERM 2106 1576468 - 1576483 + T 100 -10.4 -5.24647 | opp_overlap 1576468, overlap 1576463 TGCTTTACTATAAAA CCAGCC ACAA GGCTGG TTTTATTTTGTCTAT TERM 2107 1576887 - 1576866 - T 79 -10.3 -2.55242 | opp_overlap 1576866, overlap 1576865 1576863 ATGTAATAAAATGAG GTGCTTATT TTTT AATAAGCAC TTTTTACCGCAACAC TERM 2108 1576866 - 1576887 + T 95 -10.3 -4.56597 | opp_overlap 1576866 1576865 1576863 ATGTAATAAAATGAG GTGCTTATT TTTT AATAAGCAC TTTTTACCGCAACAC tdk 1578179 - 1577583 - | thymidine kinase TERM 2109 1578187 - 1578165 - G 70 -3.5 -4.90079 | gap 1, opp_overlap 1578170 1578173, overlap 1578170 AGCTGAATAATAAAA GTAAAGCTGA GCCA TCAGCTCT-C TCCTTAAATAGTGTG TERM 2110 1578183 - 1578170 - G 76 -6.7 -4.36716 | opp_overlap 1578170 1578173, overlap 1578165 AATAATAAAAGTAAA GCTGA GCCA TCAGC TCTCTCCTTAAATAG TERM 2111 1578968 - 1578939 - g 70 -5.6 -4.4078 | overlap 1578941 1578953 CTGGCGCAAGCAAAA CTGGTCGTGCTA AACGTG CAGCACGTCCTG CTAAATATTCATACG TERM 2112 1579022 - 1579008 - g 73 -5.7 -4.55128 | ATGGTGAAACTAAAA CTTGG ACAGG CCAAG GCCGTACACCAGCTG hns 1578689 - 1579093 + | DNA-binding protein (histone-like structuring protein) TERM 2113 1579117 - 1579141 + T 100 -13.1 -5.39905 | opp_overlap 1579117 ATACTCTATTTAAAA TACCCTTTTAA AAA TTAAAAGGGTA TTTTTCTTGTTTAGT TERM 2114 1579141 - 1579117 - T 100 -13.1 -4.19258 | opp_overlap 1579117 ATACTCTATTTAAAA TACCCTTTTAA AAA TTAAAAGGGTA TTTTTCTTGTTTAGT TERM 2115 1579290 - 1579275 - T 93 -6.1 -5.55769 | opp_overlap 1579269 1579275 TTTTATAATAAAAAA GGAGC TTTAAG GCTCC TTTTTGTCTTGTGCA TERM 2116 1579275 - 1579290 + T 88 -6.8 -5.1523 | opp_overlap 1579275, overlap 1579269 TTTTATAATAAAAAA GGAGCT TTAA GGCTCC TTTTTGTCTTGTGCA wbnF 1580330 - 1579323 - | probable nucleotide sugar epimerase galU 1581491 - 1580586 - | UTP--glucose-1-phosphate uridylyltransferase PMI1491 1582692 - 1581673 - | response regulator PMI1492 1582833 - 1583306 + | hypothetical protein TERM 2117 1583298 - 1583283 - f 93 -6.2 -5.56264 | CGTAAATACAAAAAA TGTTGT GAAC ACAACA GAAAATAATTGCAAA purU 1583345 - 1584193 + | formyltetrahydrofolate deformylase TERM 2118 1584238 - 1584280 + T 100 -11.5 -5.45652 | opp_overlap 1584238 1584244, overlap 1584244 GACACAAGCCTAAAG TAACAAGAGCCTGGGATAG TTATT TTATCACAGGCTCTTTTTA TTTTTTGTTACACAT TERM 2119 1584280 - 1584238 - T 83 -10.8 -2.82005 | opp_overlap 1584238 1584244, overlap 1584244 GACACAAGCCTAAAG TAACAAGAGCCTGGGATA GTTATTT TATCACAGGCTCTTTTTA TTTTTTGTTACACAT TERM 2120 1584244 - 1584274 + T 100 -10.5 -5.84011 | opp_overlap 1584238 1584244, overlap 1584238 AGCCTAAAGTAACAA GAGCCTGGGATAG TTATT TTATCACAGGCTC TTTTTATTTTTTGTT TERM 2121 1584274 - 1584244 - T 83 -9.8 -3.89756 | opp_overlap 1584244 1584238, overlap 1584238 AGCCTAAAGTAACAA GAGCCTGGGATA GTTATTT TATCACAGGCTC TTTTTATTTTTTGTT PMI1494 1585442 - 1584579 - | LysR-family transcriptional regulator TERM 2122 1586032 - 1586045 + G 73 -2.3 -5.31275 | AGAAACTGTCAGTGC CTTGG GCTA CCACG TTTTTTATCATGGAC xthA 1585886 - 1586692 + | exodeoxyribonuclease III TERM 2123 1586714 - 1586749 + T 100 -15 -4.24534 | opp_overlap 1586718, overlap 1586718 CTCCCCCCTTATTGA TAAACCCCACTTTAAA TAGA TTAAAAGTGGGGTTTA TTTATATATTAGTTA TERM 2124 1586718 - 1586745 + T 100 -11.4 -4.68132 | opp_overlap 1586718, overlap 1586714 CCCCTTATTGATAAA CCCCACTTTAAA TAGA TTAAAAGTGGGG TTTATTTATATATTA TERM 2125 1586745 - 1586718 - T 95 -11.4 -3.91897 | opp_overlap 1586718 1586714 CCCCTTATTGATAAA CCCCACTTTAAA TAGA TTAAAAGTGGGG TTTATTTATATATTA topB 1588749 - 1586782 - | DNA topoisomerase III TERM 2126 1588351 - 1588368 + g 71 -7 -4.06502 | opp_overlap 1588353 GTTTAAATCGTTAAT CAGGCA GCGGCG TGCCTG TTTCCTTTGAGCATC TERM 2127 1588583 - 1588571 - G 77 -10.5 -3.2827 | opp_overlap 1588569 TCATCTAACGACCAA CGCGC ATA GCGCG GATCATATGCATCCG selD 1589797 - 1588754 - | selenide, water dikinase TERM 2128 1589203 - 1589215 + g 77 -7.7 -4.27192 | overlap 1589214 TTTCAGTAGCTAGGC CCTGA TGC TCAGG TTTTAATAAGCCTTT TERM 2129 1589214 - 1589227 + g 79 -3.1 -5.37043 | overlap 1589203 AGGCCCTGATGCTCA GGTTT TAAT AAGCC TTTTTTCTCTGCGGT TERM 2130 1589610 - 1589598 - G 95 -6.3 -5.61596 | opp_overlap 1589598 1589602, overlap 1589602 ATTGGCATAAAAAAA TCAGT GGT ACTGA TAATTCCAGTGCCAT PMI1498 1590363 - 1589812 - | nitroreductase TERM 2131 1590106 - 1590121 + g 81 -2.5 -5.56112 | overlap 1590107 GGTAATAATTAAAGG TGCAC GAAAAG GTGCG TTTTTTGCTTTTTCT TERM 2132 1591360 - 1591349 - g 80 -2.2 -5.53288 | CTGAATTTAAAAAAA CAGG CAAA CCTA TCTATGCGATTAGTG TERM 2133 1591564 - 1591546 - g 73 -7.4 -3.98826 | GTAGGAACCTATAAA TCAGCTGT TGA ACCGCTGA TGCGCGATAATATGT sppA 1590922 - 1592778 + | protease IV (signal peptide peptidase) TERM 2134 1592789 - 1592809 + F 100 -15.5 -3.7014 | opp_overlap 1592780 AATAAATAAGTGTGC TCCCGCTCA ATA TGAGCGGGA TTATCTTAGCCTTTG ansA 1592985 - 1594007 + | L-asparaginase I pncA 1594029 - 1594670 + | pyrazinamidase/nicotinamidase TERM 2135 1594768 - 1594730 - T 70 -4.1 -4.94972 | gap 1 TAGTAGAACTAAAAA GTGGTGATTTATCCAAAT AATA AACTA-ATAAATCACCAC CGTTACGCTAACTTT PMI1502 1595088 - 1594807 - | hypothetical protein msrB 1595605 - 1595168 - | peptide methionine sulfoxide reductase gapA 1595947 - 1596942 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 2136 1596973 - 1596993 + F 100 -12.6 -5.57888 | CCAAGATTGATTTTA GAGCCACC CTTTC GGTGGCTC TTTTATTTTTTTACT PMI1505 1597057 - 1597941 + | aldose 1-epimerase TERM 2137 1597967 - 1597996 + T 82 -10.9 -2.57132 | opp_overlap 1597972, overlap 1597972 TACTTTGTCGAACGA AAAAAGCTTCGAA CAAA TTCGAAGCTTTTA GTTATCGAAAGCAAC TERM 2138 1597991 - 1597972 - T 100 -10.8 -5.26875 | opp_overlap 1597967 1597972 TGTCGAACGAAAAAA GCTTCGAA CAAA TTCGAAGC TTTTAGTTATCGAAA TERM 2139 1597972 - 1597991 + T 100 -10.8 -4.48987 | opp_overlap 1597972, overlap 1597967 TGTCGAACGAAAAAA GCTTCGAA CAAA TTCGAAGC TTTTAGTTATCGAAA mipA 1598783 - 1598031 - | MltA-interacting protein precursor TERM 2140 1598150 - 1598176 + g 72 -8.8 -3.57462 | overlap 1598168 CGAAGAAATCCCAGT TTTCAGCAAACT TAT AGTTAGCTGAGA TTTCAACATAAGGTC hypF 1601183 - 1598883 - | hydrogenase maturation protein TERM 2141 1600748 - 1600759 + g 86 -2.2 -5.9873 | opp_overlap 1600745, overlap 1600745 TAGAGGTAAAAGGCC TGTC GTAA GGCA TTTTTTTTATAATAG dadB 1602345 - 1601233 - | alanine racemase, catabolic TERM 2142 1602135 - 1602117 - G 76 -6.7 -4.41895 | opp_overlap 1602117 1602120 AACCTTCAAGCAAAA GAATGGG GCCTA CCCATCC TTGCTCTCTTAGCAT dadA 1603663 - 1602359 - | D-amino acid dehydrogenase small subunit TERM 2143 1603445 - 1603465 + g 70 -5.5 -4.42667 | opp_overlap 1603444 TCGGATCGCTAAAGG TGCATGTTT TTG AAACATCCA TTTTACTGCTTTTAA TERM 2144 1604178 - 1604148 - R 100 -14.9 -5.55769 | opp_overlap 1604148 CTGGATAATAAAAAA TCAGCACTGGATC AATAA GATCCAATGCTGA TGTTAAGACGGGATA TERM 2145 1604148 - 1604178 + r 100 -12.7 -3.01924 | opp_overlap 1604148 CTGGATAATAAAAAA TCAGCACTGGATC AATAA GATCCAATGCTGA TGTTAAGACGGGATA fadR 1604924 - 1604205 - | fatty acid metabolism regulatory protein TERM 2146 1606657 - 1606671 + G 72 -8.6 -3.52192 | overlap 1606654 GAATTCTGGCTCGTG CCAATG ACA CATTGG TTATATGAAATTGGC nhaB 1605160 - 1606704 + | Na+/H+ antiporter TERM 2147 1606731 - 1606757 + F 100 -15.4 -5.14563 | GAAATGAGTATTTTT TAGGGCTTTTAA TGT TTAAAAGCCCTA TTTTTTCATAAAAAC dsbB 1606876 - 1607400 + | disulfide bond formation protein B TERM 2148 1607489 - 1607461 - T 100 -14.8 -4.93296 | opp_overlap 1607461 TTATCATCACAAAAA TAGGCGCTTAAT CAGAC ATTAAGCGCCTA TTTTTCTAATTATCA TERM 2149 1607461 - 1607489 + T 100 -14.8 -5.01535 | opp_overlap 1607461 TTATCATCACAAAAA TAGGCGCTTAAT CAGAC ATTAAGCGCCTA TTTTTCTAATTATCA PMI1513 1607836 - 1607531 - | lipoprotein emrE 1608204 - 1607872 - | methyl viologen resistance protein (ethidium resistance protein) TERM 2150 1608316 - 1608291 - R 100 -10.6 -5.68489 | opp_overlap 1608295 TAGAACAACAAAAAA GGCATCTATT CAGCGC AATAGATGCC TTAAAATGCTATTTA sotB 1609568 - 1608342 - | sugar efflux transporter (MFS-family transporter) TERM 2151 1609519 - 1609531 + g 74 -9.1 -3.46824 | ATTACCCTGATCCAC GCCGT CTT ACGGC TTACTTCATTAATGC PMI1516 1610482 - 1610039 - | hypothetical protein TERM 2152 1610308 - 1610294 - G 75 -2.8 -5.18371 | opp_overlap 1610294 TTTGACAAAAGAAAA CATATC GTT GATTTG TGTTGAGGAGTTTTC TERM 2153 1610811 - 1610824 + H 73 -8.1 -3.38046 | TTGTAACCTTGACCT TCCCC TAAG GGGGA TCTTTAGAATAAAGA PMI1517 1610865 - 1611254 + | hypothetical protein TERM 2154 1611264 - 1611292 + T 93 -9.6 -4.72029 | opp_overlap 1611264 AACTAATATTTGAAA CGCAGACGTTCT ATTAA GGAAAGTCTGCG TTTTCTTACATTGCC TERM 2155 1611292 - 1611264 - T 80 -8.9 -3.67918 | opp_overlap 1611264 AACTAATATTTGAAA CGCAGACGTTC TATTAAG GAAAGTCTGCG TTTTCTTACATTGCC PMI1518 1612329 - 1611328 - | high-affinity nickel-transport protein PMI1519 1612985 - 1612320 - | hypothetical protein TERM 2156 1612839 - 1612825 - G 81 -5.8 -5.14645 | opp_overlap 1612825 ATAACCCAAGAAAAA GTTAAT CCA ATTAAC TTATCATCTTGTGTA TERM 2157 1613111 - 1613140 + r 72 -4.9 -4.7629 | opp_overlap 1613117, overlap 1613113 1613117 GAGGTGTTTAGAAAG CAAAAAGCCACCC TATT GGGTGGCTTAGTA TTTTTAACTTACTAA TERM 2158 1613113 - 1613138 + r 77 -7.5 -3.99461 | opp_overlap 1613117, overlap 1613111 1613117 GGTGTTTAGAAAGCA AAAAGCCACCC TATT GGGTGGCTTAG TATTTTTAACTTACT TERM 2159 1613117 - 1613134 + r 100 -12.7 -3.61527 | opp_overlap 1613117, overlap 1613113 1613111 TTTAGAAAGCAAAAA GCCACCC TATT GGGTGGC TTAGTATTTTTAACT TERM 2160 1613134 - 1613117 - R 100 -12.7 -5.04601 | opp_overlap 1613113 1613111 1613117 TTTAGAAAGCAAAAA GCCACCC TATT GGGTGGC TTAGTATTTTTAACT TERM 2161 1613217 - 1613237 + r 81 -10.5 -2.90714 | overlap 1613220 GCACAGCCTAGAGGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 2162 1613220 - 1613234 + r 77 -8.6 -3.5947 | overlap 1613217 CAGCCTAGAGGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2163 1613427 - 1613450 + r 79 -6.7 -4.57353 | opp_overlap 1613429, overlap 1613429 GTAGTTAGAAGAAAA AACGGACCT AAATTA AGGTCCGTA TTTTATATGGTGCCC TERM 2164 1613429 - 1613448 + r 81 -9.3 -3.89814 | opp_overlap 1613429, overlap 1613427 AGTTAGAAGAAAAAA CGGACCT AAATTA AGGTCCG TATTTTATATGGTGC TERM 2165 1613448 - 1613429 - R 100 -9.3 -5.56673 | opp_overlap 1613429 1613427 AGTTAGAAGAAAAAA CGGACCT AAATTA AGGTCCG TATTTTATATGGTGC TERM 2166 1613499 - 1613519 + r 81 -10.5 -2.90714 | opp_overlap 1613496, overlap 1613502 GCACAGCCTAAAGGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 2167 1613502 - 1613516 + r 77 -8.6 -3.5947 | opp_overlap 1613496, overlap 1613499 CAGCCTAAAGGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2168 1613699 - 1613719 + r 81 -10.5 -2.90714 | opp_overlap 1613696, overlap 1613702 GCACAGCCTAAAGGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 2169 1613702 - 1613716 + r 77 -8.6 -3.5947 | opp_overlap 1613696, overlap 1613699 CAGCCTAAAGGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2170 1613882 - 1613898 + r 74 -9.5 -2.62616 | overlap 1613885 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCAACTGA pgsA 1614614 - 1614066 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 1616502 - 1614670 - | UvrABC system protein C (excinuclease ABC subunit C) TERM 2171 1615404 - 1615424 + g 70 -8.3 -3.27544 | overlap 1615403 1615408 CAACTTGCTTAGTGG CTAATGCCG TAG CTGCATTAG TTCGTGCTAGTTTTA TERM 2172 1615580 - 1615568 - G 74 -9.1 -3.53091 | opp_overlap 1615568 1615565 ATTTCTGTGGGTAAA GTGCG GAT CGCAC TGCCTTGTAAATAAA PMI1522 1617145 - 1616486 - | response regulator TERM 2173 1617428 - 1617392 - R 100 -14.1 -3.33762 | opp_overlap 1617391 1617396, overlap 1617396 1617421 AATTAATTATAGGAA TAAAGTACTTCCTATAT AAA ATATAAGAAGCACTTTA GTACTTTAAAAATGA TERM 2174 1617424 - 1617396 - R 95 -10.5 -4.3078 | opp_overlap 1617391 1617396, overlap 1617392 1617421 AATTATAGGAATAAA GTACTTCCTATAT AAA ATATAAGAAGCAC TTTAGTACTTTAAAA PMI1523 1618039 - 1617434 - | nitroreductase TERM 2175 1618469 - 1618451 - g 100 -14.6 -5.23765 | TAAACAAGATAAAAA TGCGGCAG ATG CTGCCGCA GTTGCCGCCATGCGA glpX 1618356 - 1619336 + | fructose-1,6-bisphosphatase class II (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) TERM 2176 1619380 - 1619359 - T 100 -11.6 -5.39221 | ATAACAACTAAAAAA GCGACACG GGCTTA CGTGTCGC AAAATGTATTTAAGG PMI1525 1620449 - 1619418 - | phophotriesterase PMI1526 1621417 - 1620452 - | hypothetical protein TERM 2177 1621167 - 1621179 + g 74 -6.3 -4.35581 | opp_overlap 1621166 AGGCCAGCAAACCAG TTCCA TAA TGGAA TTTTACGTGTTTTAA TERM 2178 1621493 - 1621513 + r 100 -8.2 -5.52347 | GTTATTTTGTTATTA GCGCAGAG TGTAT CTCCGCGC TTTTTTACTTTTCTT PMI1527 1622286 - 1621549 - | hypothetical protein PMI1528 1623533 - 1622313 - | carbohydrate kinase/trancriptional regulator PMI1529 1624540 - 1625025 + | hypothetical protein TERM 2179 1625062 - 1625090 + T 100 -11.2 -5.69379 | opp_overlap 1625058 1625062 GTTATAAATAATTAA GGGCTATTTTAT GGTAA GTAAAATAGCCC TTTTTTTAGTTGTAT TERM 2180 1625090 - 1625062 - T 87 -10.5 -3.65699 | opp_overlap 1625062, overlap 1625058 GTTATAAATAATTAA GGGCTATTTTA TGGTAAG TAAAATAGCCC TTTTTTTAGTTGTAT PMI1530 1626261 - 1625125 - | hypothetical protein PMI1531 1626961 - 1626248 - | hypothetical protein PMI1532 1627347 - 1628135 + | glucose 1-dehydrogenase PMI1533 1628788 - 1628234 - | hypothetical protein TERM 2181 1628749 - 1628727 - G 100 -13.5 -3.81741 | AACTGATAAGGGAAA GCGAGCACA GTCAA TGTGCTCGC TAAGTATAAAGTTAA PMI1534 1629192 - 1628785 - | lipoprotein TERM 2182 1629730 - 1629741 + H 74 -3 -5.32699 | opp_overlap 1629730 TTTATCTCAATAAAA CAAA TCTA TTTG TTTTTTAATATTTAA PMI1535 1629981 - 1630220 + | hypothetical protein PMI1536 1630328 - 1631020 + | regulatory protein PMI1537 1631663 - 1631040 - | ABC transporter ATP-binding protein PMI1538 1632433 - 1631657 - | ABC transporter, permease protein TERM 2183 1632065 - 1632055 - G 71 -6.8 -3.99374 | overlap 1632056 TTTGAGCAATAATAA TCCC CAA GGGA GAAAAAAGGGCGCGA TERM 2184 1632505 - 1632486 - R 100 -9.2 -5.54079 | GTAAAAATGAAAAAA GCCACCTG TGAG CCGGTGGC AAAAATACAAATAAT PMI1539 1633287 - 1632532 - | ABC transporter, substrate-binding protein TERM 2185 1633386 - 1633374 - R 86 -4.1 -5.84381 | opp_overlap 1633376 TTAGTAAGAAAAAAA CAGCA AAG TGCTA GCAAGCTATCATTTT TERM 2186 1633543 - 1633526 - R 93 -9.9 -4.51224 | overlap 1633538 AATATTAATAACAAA TCCTCGT TTAA ACGAGGA TCTCACTATTAAATA PMI1540 1634547 - 1633552 - | transcriptional regulator cutA 1634903 - 1635211 + | divalent-cation tolerance protein (C-type cytochrome biogenesis protein) PMI1542 1635618 - 1635851 + | hypothetical protein TERM 2187 1635908 - 1635944 + T 74 -7.6 -3.86107 | gap 1, opp_overlap 1635908 1635911 1635937, overlap 1635912 1635937 ATTATTTATAACTAA TAGT-TTATCCCTTACA ACCT TGTAAGGGATAATAGTA TTCTATTATTGATAT TERM 2188 1635944 - 1635908 - T 71 -7.6 -3.46212 | gap 1, opp_overlap 1635908 1635912 1635937, overlap 1635911 1635937 ATTATTTATAACTAA TAGT-TTATCCCTTACA ACCT TGTAAGGGATAATAGTA TTCTATTATTGATAT TERM 2189 1635940 - 1635911 - T 82 -10.9 -2.57541 | opp_overlap 1635908 1635912 1635937, overlap 1635908 1635937 ATTTATAACTAATAG TTTATCCCTTACA ACCT TGTAAGGGATAAT AGTATTCTATTATTG TERM 2190 1635912 - 1635939 + T 100 -14.4 -2.87621 | opp_overlap 1635911 1635908 1635937, overlap 1635908 1635937 TTTATAACTAATAGT TTATCCCTTACA ACCT TGTAAGGGATAA TAGTATTCTATTATT PMI1543 1637002 - 1635950 - | hypothetical protein TERM 2191 1636516 - 1636536 + g 74 -4.7 -4.87318 | AACAACGTTTTTTAA GCCAATTAT TCA GTAATAGGC TTTTTCCATTTTCAA PMI1544 1637765 - 1636986 - | hypothetical protein TERM 2192 1637957 - 1637983 + r 77 -8 -3.93769 | opp_overlap 1637959, overlap 1637953 1637959 CCATAGAAAACAAAA AAGCCACCAGTA ACA TACTGATGGCTC TTGGTTTTTTAACCT TERM 2193 1637959 - 1637981 + r 85 -10.6 -3.54575 | opp_overlap 1637959, overlap 1637957 1637953 ATAGAAAACAAAAAA GCCACCAGTA ACA TACTGATGGC TCTTGGTTTTTTAAC TERM 2194 1637981 - 1637959 - R 100 -12.8 -5.8901 | opp_overlap 1637957 1637953 1637959 ATAGAAAACAAAAAA GCCACCAGTA ACA TACTGATGGC TCTTGGTTTTTTAAC guaA 1639604 - 1638027 - | GMP synthase [glutamine-hydrolyzing] guaB 1641155 - 1639689 - | inosine-5'-monophosphate dehydrogenase TERM 2195 1641986 - 1641997 + G 72 -4.4 -4.78107 | overlap 1641981 TTAACGATGAGCGCG TAGC CCGT GCTA TTTTTGCTAGTGATA xseA 1641325 - 1642713 + | exodeoxyribonuclease VII large subunit TERM 2196 1642757 - 1642739 - T 89 -10.3 -3.8917 | opp_overlap 1642739 TGGCAACCATAACAA CGGCATC TTAAT GATGCCG TTTGTGTTACTTGGT TERM 2197 1642739 - 1642757 + T 95 -10.3 -4.28323 | opp_overlap 1642739 TGGCAACCATAACAA CGGCATC TTAAT GATGCCG TTTGTGTTACTTGGT TERM 2198 1642800 - 1642813 + T 70 -8.1 -3.12471 | overlap 1642798 1642812 CAGAAAACGCTTTCG CCCTG CTTT CAGGG TATATTACCGTTTAT PMI1548 1645079 - 1642830 - | TonB-dependent receptor TERM 2199 1645242 - 1645192 - R 88 -6.7 -5.1523 | gap 3, opp_overlap 1645206, overlap 1645198 1645201 1645205 1645206 TTTATAAGATAAAAA TTAATAGCATTAACCCTGTCTCTC ATTAAA GAGAGACAGG-TTAAT-C-ATTAA AAATTTAAAAGGCTT TERM 2200 1645237 - 1645198 - R 73 -8.2 -3.52689 | gap 2, opp_overlap 1645206, overlap 1645192 1645201 1645205 1645206 AGATAAAAATTAATA GCATTAACCCTGTCTCTC ATTAAA GAGAGACAGG-TTAAT-C ATTAAAAATTTAAAA TERM 2201 1645235 - 1645201 - R 83 -11 -2.8719 | gap 1, opp_overlap 1645206, overlap 1645198 1645192 1645205 1645206 TAAAAATTAATAGCA TTAACCCTGTCTCTC ATTAAA GAGAGACAGG-TTAA TCATTAAAAATTTAA TERM 2202 1645232 - 1645205 - R 82 -9.9 -3.29038 | opp_overlap 1645206, overlap 1645201 1645198 1645192 1645206 AATTAATAGCATTAA CCCTGTCTCTC ATTAAA GAGAGACAGGT TAATCATTAAAAATT TERM 2203 1645206 - 1645231 + r 100 -13.4 -3.27476 | opp_overlap 1645205 1645201 1645198 1645192 1645206 ATTAATAGCATTAAC CCTGTCTCTC ATTAAA GAGAGACAGG TTAATCATTAAAAAT TERM 2204 1645231 - 1645206 - R 100 -13.4 -2.567 | opp_overlap 1645206, overlap 1645205 1645201 1645198 1645192 ATTAATAGCATTAAC CCTGTCTCTC ATTAAA GAGAGACAGG TTAATCATTAAAAAT ptrB 1647322 - 1645265 - | protease II (oligopeptidase B) TERM 2205 1646257 - 1646292 + g 71 -6.4 -4.15854 | gap 1, opp_overlap 1646257 GCCATGCCATATAGA CAGGATCATCAA-AAAT AAT ATTTGTTGATTGTCCTG TTTTCCAATCAATTT TERM 2206 1647356 - 1647411 + r 80 -5.4 -5.18726 | gap 1, opp_overlap 1647374 1647376 TGTTTGAGCCATTGT CGGTGTTGCGGTGATCAAGA-TTGCCA TCA TGGCACCTGTTAATCCCTGCGTCACCG TTTTTCTTGTCGCGG PMI1550 1648267 - 1647458 - | TonB-like protein TERM 2207 1648023 - 1648038 + g 76 -9 -3.78775 | TGCTGCTGCTTTTTT TGGCTG GCGA CAGCCA TTTGCTGATCAACAC PMI1551 1649154 - 1648285 - | lipoprotein TERM 2208 1649284 - 1649304 + r 75 -9.8 -2.94825 | opp_overlap 1649284, overlap 1649283 1649303 ACCGTAAAATAAAAA CGCCTTTT ATTAA AAAAGGCG CTTTGCTTAAAGTGG TERM 2209 1649304 - 1649284 - R 100 -9.8 -5.46706 | opp_overlap 1649284 1649283 1649303 ACCGTAAAATAAAAA CGCCTTTT ATTAA AAAAGGCG CTTTGCTTAAAGTGG maeB 1651623 - 1649341 - | NADP-dependent malic enzyme TERM 2210 1650361 - 1650337 - G 83 -9.5 -3.87373 | opp_overlap 1650341, overlap 1650341 GATAGGTTTCATAAA TAAATTCGTTT TAT AAACGAATTCA TTGAGGTGTTCGATA TERM 2211 1650357 - 1650341 - G 82 -8.1 -4.55295 | opp_overlap 1650341, overlap 1650337 GGTTTCATAAATAAA TTCGTTT TAT AAACGAA TTCATTGAGGTGTTC TERM 2212 1652692 - 1652667 - g 86 -7.8 -4.8622 | opp_overlap 1652671, overlap 1652671 GGTGGGAATGAAAAA TAAACAGATT GCCGAA AATCTGTTTA TCTCAGAAGAAACCG TERM 2213 1652688 - 1652671 - g 71 -4.2 -4.96773 | opp_overlap 1652671, overlap 1652667 GGAATGAAAAATAAA CAGATT GCCGAA AATCTG TTTATCTCAGAAGAA narP 1652173 - 1652796 + | nitrate/nitrite response regulator TERM 2214 1652832 - 1652798 - T 72 -7.1 -3.80841 | opp_overlap 1652798 1652803, overlap 1652755 1652802 1652803 AGCATCAGCACTAAA CGAATTTACCCCGAC ATTAA GTCGGGGTAATTAAG TTCTTAAGGAAGCCA TERM 2215 1652798 - 1652832 + T 70 -7.1 -3.61398 | opp_overlap 1652755 1652798 1652802 1652803, overlap 1652803 AGCATCAGCACTAAA CGAATTTACCCCGAC ATTAA GTCGGGGTAATTAAG TTCTTAAGGAAGCCA TERM 2216 1652828 - 1652802 - T 89 -10.9 -3.58162 | opp_overlap 1652798 1652803, overlap 1652798 1652803 TCAGCACTAAACGAA TTTACCCCGAC ATTAA GTCGGGGTAAT TAAGTTCTTAAGGAA TERM 2217 1652803 - 1652827 + T 100 -14.4 -3.28745 | opp_overlap 1652803 1652802 1652798, overlap 1652798 CAGCACTAAACGAAT TTACCCCGAC ATTAA GTCGGGGTAA TTAAGTTCTTAAGGA TERM 2218 1652827 - 1652803 - T 100 -14.4 -2.74415 | opp_overlap 1652798 1652803, overlap 1652802 1652798 CAGCACTAAACGAAT TTACCCCGAC ATTAA GTCGGGGTAA TTAAGTTCTTAAGGA PMI1554 1653426 - 1652866 - | hypothetical protein TERM 2219 1653878 - 1653857 - g 85 -2.9 -5.84381 | opp_overlap 1653870 1653875 TGATGAAGAAAAAAA TGCTATCAC TGAT GTGAATGCA GCCATTGCACTTATG PMI1555 1653627 - 1653998 + | glutaredoxin-related protein dapE 1654004 - 1655134 + | N-succinyl-diaminopimelate deacylase PMI1557 1655131 - 1655799 + | D-alanyl-D-alanine carboxypeptidase PMI1558 1656190 - 1655816 - | hypothetical protein PMI1559 1658478 - 1656427 - | acetyltransferase/ATPase PMI1560 1658933 - 1658481 - | hypothetical protein PMI1561 1659880 - 1658996 - | neutral zinc metallopeptidase TERM 2220 1660082 - 1660063 - R 80 -6.4 -4.83269 | opp_overlap 1660063 ATAGCATATTAAAAA GGTCAGTT TTTA AGCTGACC TTTTTCTTTTATGGA TERM 2221 1660063 - 1660082 + r 100 -8.6 -5.54907 | opp_overlap 1660063 ATAGCATATTAAAAA GGTCAGTT TTTA AGCTGACC TTTTTCTTTTATGGA purC 1660840 - 1660127 - | phosphoribosylaminoimidazole-succinocarboxamide synthetase (SAICAR synthetase) TERM 2222 1661015 - 1661037 + r 88 -12 -2.87769 | opp_overlap 1661015, overlap 1661012 1661010 ATTGAGTGATAAAAA GGCCGCACAT TTT ATGTACGGCC TGATATTTAATAGAT TERM 2223 1661037 - 1661015 - R 100 -14.2 -4.88067 | opp_overlap 1661015 1661012 1661010 ATTGAGTGATAAAAA GGCCGCACAT TTT ATGTACGGCC TGATATTTAATAGAT nlpB 1662110 - 1661064 - | lipoprotein TERM 2224 1662139 - 1662152 + r 70 -8.1 -3.02966 | overlap 1662138 GTTTTACAGTATTCC CGCTG TTAA CAGCG CTTTCTCTACGATAT dapA 1663026 - 1662127 - | dihydrodipicolinate synthase TERM 2225 1662668 - 1662681 + g 76 -6.7 -4.3767 | AAATGTTGATAAAGC CCTTC TTGG GAAGG TTTATTATAGTATGG TERM 2226 1663649 - 1663632 - g 72 -9.9 -3.05775 | overlap 1663631 ATTAGTTTCTAAAAC CCATCCT TCTG AGGATGG TACTCCTGCTCGTTT gcvR 1663243 - 1663800 + | glycine cleavage system transcriptional repressor bcp 1663820 - 1664290 + | peroxiredoxin (bacterioferritin comigratory protein) TERM 2227 1664315 - 1664358 + T 85 -10.7 -3.3785 | gap 1, opp_overlap 1664319 1664324, overlap 1664324 1664355 1664356 ACAGCTTAGTGCTGA TAAATAAAACAGACAGCCAT TAACT ATCGCTGTCTGTTTT-TTTA TTATCAATAAGTTGA TERM 2228 1664355 - 1664319 - T 83 -9.6 -3.86897 | opp_overlap 1664315 1664324, overlap 1664324 CTTAGTGCTGATAAA TAAAACAGACAGCCAT TAACT ATCGCTGTCTGTTTTT TTATTATCAATAAGT TERM 2229 1664324 - 1664350 + T 100 -9.5 -5.88565 | opp_overlap 1664319 1664324, overlap 1664315 TGCTGATAAATAAAA CAGACAGCCAT TAACT ATCGCTGTCTG TTTTTTTATTATCAA TERM 2230 1664350 - 1664324 - T 100 -9.5 -4.99043 | opp_overlap 1664324 1664315, overlap 1664319 TGCTGATAAATAAAA CAGACAGCCAT TAACT ATCGCTGTCTG TTTTTTTATTATCAA perM 1665480 - 1664392 - | hypothetical protein PMI1568 1665635 - 1667107 + | exported protease PMI1569 1667116 - 1667472 + | glutaredoxin-related protein TERM 2231 1668167 - 1668201 + F 81 -2.9 -5.76949 | gap 1, overlap 1668169 1668171 1668175 CTTCTTTTACACATG CCTA-CTCGCTATCTC ACTA GAGATAGTGCGTTATG TTTTTTTTAAAAGTG TERM 2232 1668171 - 1668196 + F 85 -8.3 -4.34951 | overlap 1668169 1668167 1668175 TTTTACACATGCCTA CTCGCTATCTC ACTA GAGATAGTGCG TTATGTTTTTTTTAA xapB 1668320 - 1669570 + | xanthosine permease (MFS-family transporter) TERM 2233 1669603 - 1669626 + T 100 -14 -5.52023 | TATTTGTTGCACTCA CCGCTTATCT TTCG AGATAAGCGG TTTTTTATTACTGGT hda 1670426 - 1669680 - | DnaA-homolog protein PMI1572 1671755 - 1670550 - | mechanosensitive ion channel membrane protein TERM 2234 1671991 - 1672005 + r 100 -10 -4.88407 | opp_overlap 1671991 TAACCAATAAAAAAA GCAGTC TAT GACTGC TTTTTAGTTCAATGA TERM 2235 1672005 - 1671991 - R 100 -10 -5.87996 | opp_overlap 1671991 TAACCAATAAAAAAA GCAGTC TAT GACTGC TTTTTAGTTCAATGA uraA 1673353 - 1672052 - | uracil permease TERM 2236 1673454 - 1673436 - R 100 -10.3 -5.81412 | opp_overlap 1673436 GTGATCCAAAAAAAA GCCGACT ATCAA AGTCGGC TTAATCATTATTTTG TERM 2237 1673436 - 1673454 + r 83 -10.3 -3.36965 | opp_overlap 1673436 GTGATCCAAAAAAAA GCCGACT ATCAA AGTCGGC TTAATCATTATTTTG upp 1674088 - 1673462 - | uracil phosphoribosyltransferase TERM 2238 1674756 - 1674792 + G 74 -3.8 -5.13344 | gap 1, opp_overlap 1674747 AAACAGCGGAAATGC CCGGCATGTATCATGGT AACG ATTATGATATC-GCCGG TTTTTGTGTTGGTGT purM 1674320 - 1675360 + | phosphoribosylformylglycinamidine cyclo-ligase (phosphoribosyl-aminoimidazole synthetase) TERM 2239 1675442 - 1675415 - g 85 -12.8 -3.20747 | overlap 1675406 AGGAAATGGTAGCAA CCTACAGGCG ATTATTGA CGCCTGTAGG GCGCATAAAATCGCA purN 1675374 - 1676003 + | phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase) TERM 2240 1676020 - 1676062 + F 78 -9.2 -3.51563 | opp_overlap 1676025, overlap 1676025 1676052 GGTTTCACTTAAGAT AAAAAGTCACTTTGTGCTAC ACT GTAGCCCGCGGTGACTTTTA TTGTGTCACCCTTTT TERM 2241 1676057 - 1676025 - f 75 -4.7 -5.10767 | opp_overlap 1676020 1676025 1676052 CACTTAAGATAAAAA GTCACTTTGTGCTAC ACT GTAGCCCGCGGTGAC TTTTATTGTGTCACC TERM 2242 1676025 - 1676057 + F 93 -9.1 -4.84311 | opp_overlap 1676025, overlap 1676020 1676052 CACTTAAGATAAAAA GTCACTTTGTGCTAC ACT GTAGCCCGCGGTGAC TTTTATTGTGTCACC speG 1676113 - 1676703 + | spermidine N(1)-acetyltransferase (diamine acetyltransferase) TERM 2243 1677533 - 1677518 - g 71 -6.1 -4.14739 | TCATCTACCTTAAAA CAGCG CCTTAC CGCTG AGCCTGTTCGTTTTG ppk 1676750 - 1678831 + | polyphosphate kinase TERM 2244 1679455 - 1679445 - g 85 -5.4 -5.2696 | GTAAAATGGAAAAAA TTGC TTG GCAA TATAAAATGACCGGC ppx 1678835 - 1680370 + | exopolyphosphatase TERM 2245 1680394 - 1680411 + F 72 -4.8 -4.76213 | opp_overlap 1680394, overlap 1680389 TATTATACAGAAAAA GACGCG GTATAA TGCGTC TTTTGTTGCATTTAT TERM 2246 1680411 - 1680394 - f 70 -4.1 -5.05601 | opp_overlap 1680394 1680389 TATTATACAGAAAAA GACGC GGTATAAT GCGTC TTTTGTTGCATTTAT PMI1580 1680604 - 1682067 + | magnesium transporter TERM 2247 1682110 - 1682083 - f 100 -10.7 -5.09685 | gap 1, opp_overlap 1682083 CAAGACAGATAAAAA CGCCACTGTAGA GTACA TC-ACAGTGGCG TTTTTGTTTTTATAG TERM 2248 1682083 - 1682110 + F 100 -10.7 -5.69262 | gap 1, opp_overlap 1682083 CAAGACAGATAAAAA CGCCACTGTAGA GTACA TC-ACAGTGGCG TTTTTGTTTTTATAG TERM 2249 1682925 - 1682945 + F 71 -8.4 -3.25223 | ATTGTTTTATTTTAT GCTCTTTA CTTCA TAAAGAGC TTCCTGATATAACTA TERM 2250 1683936 - 1683950 + G 73 -8.6 -3.62224 | TTGTTACTATTTTGA TGACAC CCA GTGTCA TTGTTGAAGGGATCT PMI1581 1683119 - 1684492 + | MFS-family transporter TERM 2251 1684568 - 1684543 - f 100 -14.1 -3.37975 | opp_overlap 1684543 1684546, overlap 1684546 ATTTATTATTCACAA CAACACCACCC TAAT AGGTGGTGTTG TTGCATCAATATAAT TERM 2252 1684543 - 1684568 + F 100 -13.4 -3.09193 | opp_overlap 1684543 1684546, overlap 1684546 ATTTATTATTCACAA CAACACCACC CTAATA GGTGGTGTTG TTGCATCAATATAAT TERM 2253 1684565 - 1684546 - f 87 -10 -3.82824 | opp_overlap 1684543 1684546, overlap 1684543 TATTATTCACAACAA CACCACCC TAAT AGGTGGTG TTGTTGCATCAATAT TERM 2254 1684546 - 1684565 + F 80 -9.3 -3.68836 | opp_overlap 1684546 1684543, overlap 1684543 TATTATTCACAACAA CACCACC CTAATA GGTGGTG TTGTTGCATCAATAT PMI1582 1684707 - 1685387 + | hypothetical protein PMI1583 1686024 - 1685395 - | hypothetical protein TERM 2255 1686157 - 1686184 + r 90 -11.4 -3.49475 | opp_overlap 1686162, overlap 1686162 1686181 TTTTAAATAGATATA AAAAAGGATGCC CTAA GGCATCCTTTTA TTGTCTGACAATAAA TERM 2256 1686179 - 1686162 - R 100 -11.3 -5.46276 | opp_overlap 1686157 1686162 AATAGATATAAAAAA GGATGCC CTAA GGCATCC TTTTATTGTCTGACA TERM 2257 1686162 - 1686179 + r 100 -11.3 -4.84311 | opp_overlap 1686162, overlap 1686157 AATAGATATAAAAAA GGATGCC CTAA GGCATCC TTTTATTGTCTGACA TERM 2258 1686181 - 1686199 + r 73 -7.6 -3.67517 | overlap 1686157 GCCCTAAGGCATCCT TTTATTGT CTG ACAATAAA TTTCACATATTACTG tppB 1687675 - 1686209 - | tripeptide permease (MFS-family transporter) TERM 2259 1687948 - 1687960 + H 72 -4.9 -4.80453 | AACAAAATAACTCAC TGATT ATT AATCA TTTATTTTATGCTGG mdtA 1688243 - 1689478 + | multidrug resistance protein mdtB 1689478 - 1692609 + | multidrug resistance protein mdtC 1692606 - 1695689 + | multidrug resistance protein TERM 2260 1696726 - 1696736 + G 75 -5.4 -4.79826 | AGCTGATCCGGATAG GTTG ATC CAAC TTTTTCATAATCTAT baeS 1695686 - 1697062 + | two-component system sensor kinase baeR 1697128 - 1697835 + | two-component system response regulator TERM 2261 1699200 - 1699182 - g 82 -3.8 -5.4833 | TTATTTAATAAAAAA CAACAACC GAC AGATGTTG CTCCGGGTAATGGCC PMI1590 1697955 - 1699334 + | protease TERM 2262 1699466 - 1699493 + F 100 -12.9 -5.61277 | opp_overlap 1699472 AGGAACCACCTCCTT GGCAAATCCAA TCTCCC TTGGATTTGCC TTTTCTTTTTTTATC TERM 2263 1699693 - 1699681 - g 72 -3.4 -5.17576 | TATCAATGGAAAAAA CTCA GGCAA TGAG GCTCTGCGACAAGCG PMI1591 1699643 - 1700536 + | diacylglycerol kinase fbaB 1700586 - 1701635 + | fructose-bisphosphate aldolase class I TERM 2264 1701663 - 1701679 + T 100 -9.4 -4.8048 | opp_overlap 1701663 AAATTACGCATTGAA GCCCCT TTAAT AGGGGC TTTTTGATATCACCA TERM 2265 1701679 - 1701663 - T 76 -9.4 -3.09208 | opp_overlap 1701663 AAATTACGCATTGAA GCCCCT TTAAT AGGGGC TTTTTGATATCACCA thiD 1702486 - 1701689 - | phosphomethylpyrimidine kinase TERM 2266 1702639 - 1702623 - H 75 -8.1 -3.64703 | GCGCCCCGAGCCAAA GCTTATA TGA TATAAGC CACAAGAGTATCGCA TERM 2267 1703281 - 1703262 - g 70 -3.4 -4.90778 | opp_overlap 1703266, overlap 1703265 1703266 TGTACTCAAATAAAA GTATGGCG TTCT CGCCTTCC TAAACATCGCAATGT PMI1594 1702950 - 1703594 + | hypothetical protein pagP 1704191 - 1704850 + | antimicrobial peptide resistance and lipid A acylation protein TERM 2268 1704898 - 1704871 - T 100 -10 -5.4505 | opp_overlap 1704875, overlap 1704875 TGCCCTAATAAAAAA TAAAGTGACTCT TTTT AGAGTCACTTTT TTAATATCGCGTTTT TERM 2269 1704875 - 1704894 + T 100 -10.8 -5.21709 | opp_overlap 1704871 1704875 CTAATAAAAAATAAA GTGACTCT TTTT AGAGTCAC TTTTTTAATATCGCG TERM 2270 1704894 - 1704875 - T 100 -10.8 -5.20735 | opp_overlap 1704875, overlap 1704871 CTAATAAAAAATAAA GTGACTCT TTTT AGAGTCAC TTTTTTAATATCGCG pheP 1706333 - 1704951 - | phenylalanine-specific permease TERM 2271 1706073 - 1706061 - G 77 -4.8 -4.87786 | CCAACCTGATAAAAA GCCA GCAAA TGGC CCCCAATACTTATTG TERM 2272 1706599 - 1706619 + H 88 -7.1 -4.94058 | opp_overlap 1706597 1706599 1706602, overlap 1706590 AGCTGATAGCTAATA TAATTATTA AGC TAATAATTA TTTTCTTTGCGTTCA PMI1597 1706994 - 1707380 + | AraC-family transcriptional regulator yidA 1707504 - 1708310 + | phosphatase TERM 2273 1708386 - 1708363 - f 74 -9.7 -2.61086 | opp_overlap 1708362, overlap 1708362 1708358 AAATTATATAGCAAT TGTGATCCT AGCTAG AGGATCACA CTGCTTGCCCCCCTG PMI1599 1708612 - 1709964 + | branched chain amino acid transport protein TERM 2274 1710012 - 1709979 - T 100 -19.1 -3.30214 | opp_overlap 1709979, overlap 1709967 AATCCATTATAGCAA CTAGCCCCAAAGTAA ATGG TCACTTTGGGGCTAG TTTTTATCCTTAATA TERM 2275 1709979 - 1710012 + T 100 -16.9 -4.99861 | opp_overlap 1709967 1709979 AATCCATTATAGCAA CTAGCCCCAAAGTAA ATGG TCACTTTGGGGCTAG TTTTTATCCTTAATA PMI1600 1710916 - 1710032 - | probable N-acetylmuramoyl-L-alanine amidase TERM 2276 1710965 - 1710998 + r 85 -6.9 -5.02716 | opp_overlap 1710972, overlap 1710967 1710972 AGGCTAAATTGTAGA CAAAAAACCCATATT AAAA AATATGGGTTTTGTA TTTTGGTTTTTTTTT TERM 2277 1710967 - 1710996 + r 86 -9.5 -4.05035 | opp_overlap 1710972, overlap 1710965 1710972 GCTAAATTGTAGACA AAAAACCCATATT AAAA AATATGGGTTTTG TATTTTGGTTTTTTT TERM 2278 1710991 - 1710972 - R 100 -9.4 -5.37043 | opp_overlap 1710967 1710965 1710972 ATTGTAGACAAAAAA CCCATATT AAAA AATATGGG TTTTGTATTTTGGTT TERM 2279 1710972 - 1710991 + r 100 -9.4 -4.93333 | opp_overlap 1710972, overlap 1710967 1710965 ATTGTAGACAAAAAA CCCATATT AAAA AATATGGG TTTTGTATTTTGGTT PMI1601 1712516 - 1711047 - | sodium:alanine symporter TERM 2280 1711459 - 1711448 - G 86 -2.2 -5.96894 | AGGCAAAGAAAAAAA TCGC AACA GCAA TAAAAGTACTCCCCC TERM 2281 1712256 - 1712243 - G 88 -8.1 -5.1287 | overlap 1712245 CCCACATCCAAAAAA TGGCC CCAG GGCCA CCTGCGGTCAGCGCA TERM 2282 1712678 - 1712692 + H 84 -3.6 -5.88476 | opp_overlap 1712678 AATGTAACACAAGAT TATACG ATA TGTATA TTTTTTGTTTATTTT TERM 2283 1713381 - 1713401 + H 100 -11.2 -6.02345 | GTTGTATTATTTTTT GCCCTGTT TCCCC AACAGGGC TTTTTTTTATCCTTA TERM 2284 1713572 - 1713559 - H 70 -3.9 -5.05113 | TTGATATAAATAAAA TTGAT CTAG ATCAA ATATAAAACTCGTCA TERM 2285 1713717 - 1713746 + H 71 -2.3 -5.3236 | opp_overlap 1713718 1713733, overlap 1713718 TTTAAAGGCAATATT ATTTACTACTAAT AACT ATTAGTAATAAAG TTTTTTATCCATTAT holE2 1713879 - 1714103 + | DNA polymerase III, theta subunit TERM 2286 1714128 - 1714151 + T 100 -8.3 -5.79595 | opp_overlap 1714128 TCAATATTAAAAAAA GAGATAAAC ATTTAC GTTTATCTC TTTTTTATTTTCAAG TERM 2287 1714151 - 1714128 - T 100 -9 -5.63374 | opp_overlap 1714128 TCAATATTAAAAAAA GAGATAAACA TTTA CGTTTATCTC TTTTTTATTTTCAAG PMI1603 1714615 - 1714220 - | hypothetical protein TERM 2288 1714579 - 1714569 - G 87 -3.2 -5.80364 | ACCGCAAGAAAAAAA CCTG CAC CAAG TATCCCTGTTTGACC PMI1604 1714895 - 1714713 - | hypothetical protein TERM 2289 1714751 - 1714761 + g 73 -6.8 -4.18115 | overlap 1714749 CAATAGAGACTGATT CACG AGT CGTG TGTTTTTCTCTTAAT pabB 1715008 - 1716402 + | para-aminobenzoate synthase component I TERM 2290 1716491 - 1716470 - g 93 -10.9 -5.05782 | opp_overlap 1716470 ATTGATGCTAAAAAA TCGGCAGCA GTTT TACTGCCGA TTATCAATAAGCCTA TERM 2291 1716470 - 1716491 + G 70 -8.7 -3.35996 | opp_overlap 1716470 ATTGATGCTAAAAAA TCGGCAGCA GTTT TACTGCCGA TTATCAATAAGCCTA TERM 2292 1716551 - 1716527 - g 72 -9.9 -3.0263 | opp_overlap 1716531, overlap 1716529 ACGATCCTCTTAACA GAGCGCGCATC AAC GTTGCGCTCTC ATGCCGGACAAGTTG TERM 2293 1716768 - 1716782 + G 70 -8.6 -3.38224 | overlap 1716766 TACGGCATAATCCCA CAGAAG TCG CTTCTG TCTTTGAAATGCCAT PMI1606 1716389 - 1716949 + | NUDIX-family protein TERM 2294 1717508 - 1717523 + G 73 -7.6 -4.11216 | opp_overlap 1717508 1717507 CATTACATGAAAATG GCATGA CAAT TCATGC TTTTGCAGGTGACAA sdaA 1717135 - 1718496 + | L-serine deaminase 1 (L-serine deaminase 1) TERM 2295 1718539 - 1718519 - f 93 -11.3 -3.57462 | opp_overlap 1718519 GATTTTATTTCTAAA GTCCATTTA TAA TAAATGGAC TTTTTTTATTTAAAT TERM 2296 1718519 - 1718539 + F 100 -11.3 -5.96894 | opp_overlap 1718519 GATTTTATTTCTAAA GTCCATTTA TAA TAAATGGAC TTTTTTTATTTAAAT TERM 2297 1718896 - 1718870 - f 72 -2.4 -5.37593 | opp_overlap 1718873 1718875, overlap 1718873 1718876 TTTCAAACGAAAAAA CAATAATGATAA TTA TTATCAATATCA TCTTTTAAATATATG TERM 2298 1718890 - 1718876 - f 72 -5.8 -4.42047 | opp_overlap 1718875 1718873, overlap 1718873 1718870 ACGAAAAAACAATAA TGATAA TTA TTATCA ATATCATCTTTTAAA PMI1608 1719152 - 1719736 + | hypothetical protein TERM 2299 1719756 - 1719780 + T 100 -8 -5.55769 | gap 1, opp_overlap 1719756 TCATAATATGAAAAA GCTTAGGTATG AACA CA-ACCTAAGC TTTTTTATTCTAAAC TERM 2300 1719780 - 1719756 - T 90 -8 -4.90906 | gap 1, opp_overlap 1719756 TCATAATATGAAAAA GCTTAGGTATG AACA CA-ACCTAAGC TTTTTTATTCTAAAC rrmA 1720602 - 1719790 - | ribosomal RNA large subunit methyltransferase A TERM 2301 1720659 - 1720630 - R 100 -11.6 -5.09259 | TATTCCAAAATAAAA TTGGGAGAGATA ATAACA TATCTCCCCCAA TCATGCGGAAAACCT psiE 1721136 - 1720723 - | hypothetical protein PMI1611 1721378 - 1721821 + | universal stress protein PMI1612 1722748 - 1721930 - | metallo-beta-lactamase superfamily protein TERM 2302 1722845 - 1722820 - R 72 -2.6 -5.37593 | TGCCAAATTAAAAAA GCAGTTGA TAAGACGCCG TCAACCGC TTAATGGTATTGCTA PMI1613 1723312 - 1722878 - | universal stress protein TERM 2303 1723600 - 1723569 - R 85 -8.9 -4.10672 | opp_overlap 1723570 1723575, overlap 1723570 1723572 TTAACTCAAATTAAA GTATAACCCTATC GAAAAA GATAGGGTTATAT TTATCCAATGACCAT TERM 2304 1723599 - 1723570 - R 90 -12.4 -3.0568 | opp_overlap 1723570 1723575, overlap 1723569 1723572 TAACTCAAATTAAAG TATAACCCTATC GAAAAA GATAGGGTTATA TTTATCCAATGACCA TERM 2305 1723570 - 1723599 + r 100 -12.4 -3.89346 | opp_overlap 1723569 1723570 1723572, overlap 1723575 TAACTCAAATTAAAG TATAACCCTATC GAAAAA GATAGGGTTATA TTTATCCAATGACCA TERM 2306 1723597 - 1723572 - R 83 -10.6 -3.07332 | opp_overlap 1723570 1723575, overlap 1723570 1723569 ACTCAAATTAAAGTA TAACCCTATC GAAAAA GATAGGGTTA TATTTATCCAATGAC TERM 2307 1723575 - 1723594 + r 74 -7.9 -3.90097 | opp_overlap 1723572 1723570 1723569, overlap 1723570 CAAATTAAAGTATAA CCCTATC GAAAAA GATAGGG TTATATTTATCCAAT cycA 1725046 - 1723634 - | D-serine/D-alanine/glycine transporter TERM 2308 1724762 - 1724750 - G 87 -4.8 -5.4833 | CCATCCAACAAAAAA GCCT GCCCA AGGC CCTAATAAATCCCCG TERM 2309 1725409 - 1725428 + r 100 -10.8 -5.76237 | opp_overlap 1725408 TAATCAGTCAGATAG GCCACTTA GTGA TAAGTGGC TTTTTTGTTTCTATC TERM 2310 1725753 - 1725726 - R 100 -10.8 -5.40474 | opp_overlap 1725726 ATTTTGCCAAAAAAA TACCACCTATAT TCTT ATATAGATGGTA TTTCATTAAATAAAA TERM 2311 1725726 - 1725753 + r 79 -8.6 -3.93288 | opp_overlap 1725726 ATTTTGCCAAAAAAA TACCACCTATAT TCTT ATATAGATGGTA TTTCATTAAATAAAA putP 1727272 - 1725788 - | sodium/proline symporter (proline permease) TERM 2312 1731592 - 1731621 + G 73 -8.7 -3.64283 | gap 1, opp_overlap 1731595 1731596, overlap 1731595 GCTATTATTTCAGTA CAAGGCT-TCTCAC GTG GTGAGACAGCATTG TTATTAGAGCGTTTA putA 1727740 - 1731708 + | bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate TERM 2313 1731743 - 1731774 + T 91 -4.6 -6.02919 | ACTTTATTTTTGAGA CCACCTTTAA CTTACTTATCTA TTAAAGGTGG TTTTTTTATTTCTGG TERM 2314 1731825 - 1731805 - T 100 -8.3 -5.84011 | opp_overlap 1731805 AATAAAAAATAAAAA GGAGCAACA TAA TGTTACCCC TTTTTTTAGGTCTCT TERM 2315 1731805 - 1731825 + T 77 -3.9 -5.51402 | opp_overlap 1731805 AATAAAAAATAAAAA GGAGCAACA TAA TGTTACCCC TTTTTTTAGGTCTCT fliZ 1732382 - 1731852 - | FliZ protein TERM 2316 1732341 - 1732362 + g 80 -6.5 -4.66537 | opp_overlap 1732345, overlap 1732345 TTTATAGTCTTTAAT GTAACGGCT TAGC GGCCGTTTC TTTTGTGTTGAAACA TERM 2317 1732345 - 1732358 + g 79 -5.9 -4.88163 | opp_overlap 1732345, overlap 1732341 TAGTCTTTAATGTAA CGGCT TAGC GGCCG TTTCTTTTGTGTTGA fliA 1733163 - 1732441 - | RNA polymerase sigma factor for flagellar operon TERM 2318 1733578 - 1733552 - R 100 -15.2 -5.14563 | overlap 1733536 GTTTTGATGAAAAAA CACCCACAGCAA AAA TGGCTGTGGGTG GGATCTGAAGATGAG fliC2 1734709 - 1733606 - | flagellin 2 TERM 2319 1734980 - 1734963 - R 100 -9.1 -5.4588 | opp_overlap 1734963 1734979 TAAAATGACAAAAAA GACCCTC AGAT GAGGGCC TTTGATATAGAAAGG fliC1 1736110 - 1735019 - | flagellin 1 TERM 2320 1735223 - 1735203 - G 70 -9.9 -2.62263 | overlap 1735205 AGGTTGTTGATAGTA GATTCAAAA CGG TTTTGAATC GCACCTAATTTAGAA TERM 2321 1737727 - 1737713 - g 79 -3.5 -5.44721 | ATTACCTGAAAAAAA CGCTG CAATC CAACG ACGGCACCCTTGATA fliD 1736497 - 1737915 + | flagellar hook-associated protein 2 fliS 1737941 - 1738339 + | flagellar protein FliS fliT 1738358 - 1738711 + | flagella protein TERM 2322 1738971 - 1738951 - T 100 -9 -5.38958 | ACCGATAAATAAAAA TCGCCTAC ACATG GCAGGCGA TAAACTTACTGTTTC PMI1624 1740147 - 1739005 - | hypothetical protein TERM 2323 1740593 - 1740571 - R 100 -7.1 -6.23317 | opp_overlap 1740571 ATAAAAACAAAAAAA TCTCGCTAA TGATC TTAACGAGA TTTTTATCAATTGAT TERM 2324 1740571 - 1740593 + r 72 -4.9 -4.92314 | opp_overlap 1740571 ATAAAAACAAAAAAA TCTCGCTAA TGATC TTAACGAGA TTTTTATCAATTGAT PMI1625 1740876 - 1740613 - | hypothetical protein PMI1626 1741160 - 1740930 - | hypothetical protein TERM 2325 1741917 - 1741930 + G 95 -4.5 -5.71712 | GCAAATCCTGAAGCC GCTGT TGGT GCAGC TTTTTTTATATGGAC TERM 2326 1742057 - 1742037 - g 83 -8.9 -4.03978 | AACGTCCTATACAAA GGCCCTACC AAT GGTTGGACC TCAGAACAACAATCA PMI1627 1741563 - 1742255 + | fimbrial subunit TERM 2327 1742268 - 1742306 + F 88 -9.2 -4.27316 | opp_overlap 1742273 TAATTTTAACATATT GATAATCACATTATAA TTAACCT TTATATTGTGATTATC TTTTACGTTAAAAAA TERM 2328 1742508 - 1742490 - f 72 -8.8 -3.17212 | overlap 1742492 TTATCACTTCATCAA CAGATGGG GGA CCCATCAG CAAAAATGGTACAGG TERM 2329 1742506 - 1742492 - f 81 -10 -3.1478 | overlap 1742490 ATCACTTCATCAACA GATGGG GGA CCCATC AGCAAAAATGGTACA PMI1628 1742540 - 1742653 + | metalloelastase fliE 1742996 - 1742664 - | flagellar hook-basal body complex protein fliF 1743252 - 1744973 + | flagellar M-ring protein fliG 1744970 - 1745968 + | flagellar motor switch protein TERM 2330 1746162 - 1746146 - g 93 -10.1 -4.97158 | opp_overlap 1746160 TGACATGAAAGAAAA GGCCCAA AAA CTGGGCC ATGCTGAAGGCTTTG fliH 1745961 - 1746683 + | flagellar assembly protein TERM 2331 1746829 - 1746803 - g 72 -9.4 -3.07816 | opp_overlap 1746795 1746808, overlap 1746808 GGCTTAGTCATGGAA GCTAAGGGGC TAGTTAT GCCCCTTGGC TCTACCTGCTTAATA fliI 1746683 - 1748056 + | flagellum-specific ATP synthase TERM 2332 1748153 - 1748133 - g 71 -9.7 -2.89742 | overlap 1748123 1748135 GGGAACTGGCACAGA CAGCGGC AGAACAA GCCGCTG TCCAACTAGCCCAAG fliJ 1748087 - 1748533 + | flagellar protein FliJ TERM 2333 1749344 - 1749310 - g 75 -5.9 -4.68724 | gap 1, opp_overlap 1749339, overlap 1749295 1749314 1749338 1749339 TCAGCCAATACAAAA TTAGCCGATAATCTGG CAAA CCAAATAATCGG-TAA TAACCGTATTGCTGA fliK 1748533 - 1749945 + | flagellar hook-length control protein fliL 1750123 - 1750605 + | flagellar protein FliL fliM 1750611 - 1751642 + | flagellar motor switch protein fliN 1751635 - 1752045 + | flagellar motor switch protein fliO 1752049 - 1752495 + | flagellar protein fliP 1752495 - 1753265 + | flagellar biosynthetic protein fliQ 1753280 - 1753549 + | flagellar biosynthetic protein TERM 2334 1754227 - 1754264 + G 72 -9.3 -3.29704 | gap 1, overlap 1754226 CTTACCCTCACGATC GGTA-TGTTGGCGTTATC ACT GATTATGCCAGCATTACC TGTGTTTACTGAGCG fliR 1753555 - 1754337 + | flagellar biosynthetic protein PMI1643 1754561 - 1754418 - | hypothetical protein TERM 2335 1754601 - 1754580 - R 100 -9.5 -5.76633 | overlap 1754592 TTACAGATAAAAAAA TCCCCTGAT AAAT ATCAAGGGA TAATCGCTTATTTTA flgL 1755594 - 1754650 - | flagellar hook-associated protein 3 (hook-filament junction protein) TERM 2336 1754895 - 1754920 + g 74 -9.1 -3.54475 | opp_overlap 1754901, overlap 1754894 TATTTAATGTGGCGC GATTAACACGG TTAG CCGTATTAATC TTATCTAATGCAGCA flgK 1757263 - 1755620 - | flagellar hook-associated protein 1 TERM 2337 1756957 - 1756988 + g 89 -6.8 -5.20333 | gap 1 AAACATCATTGCCTT TATC-CGCTAATAAA TTA TTTATTTGCGAGATA TTTTTGTTATAGCTA flgJ 1758368 - 1757382 - | peptidoglycan hydrolase (muramidase) TERM 2338 1758237 - 1758254 + g 83 -12.7 -2.80016 | opp_overlap 1758226, overlap 1758235 AACCCCCTCAAGTTG CTGCGCC ACTT GGCGCAG TCCTTGCTGATCGGC flgI 1759474 - 1758368 - | flagellar P-ring protein precursor (basal body P-ring protein) flgH 1760232 - 1759489 - | flagellar L-ring protein precursor TERM 2339 1760031 - 1760016 - G 72 -4.6 -4.80487 | overlap 1760018 GATAACCAAAATAAA CCGGCT GAGT AGCCTG AAAAATAGAGCCATT TERM 2340 1760280 - 1760253 - R 90 -12.2 -3.14683 | gap 1, overlap 1760255 ATACTCTTTTAGTAA TACGCCTGACAGA AAT TCTGTCAGGC-TA ATGAATCAACGAAAT TERM 2341 1760279 - 1760255 - R 100 -12.9 -3.13522 | overlap 1760253 ACTCTTTTAGTAATA CGCCTGACAGA AAT TCTGTCAGGCT AATGAATCAACGAAA flgG 1761077 - 1760295 - | flagellar basal-body rod protein (distal rod protein) flgF 1761852 - 1761097 - | flagellar basal-body rod protein flgE 1763094 - 1761874 - | flagellar hook protein flgD 1763917 - 1763123 - | basal-body rod modification protein TERM 2342 1763221 - 1763232 + g 72 -4.4 -4.73388 | CGGAATTGACTACCG CACT TTTA AGTG TTTTTACTGGGACTT flgC 1764334 - 1763930 - | flagellar basal-body rod protein flgB 1764753 - 1764340 - | flagellar basal-body rod protein TERM 2343 1764673 - 1764690 + g 73 -7 -4.21974 | opp_overlap 1764668, overlap 1764668 1764688 ATTAGCAATATTTGC CGCCAA AATTTC TTGGCG TTTATTACGTAGTGA flgA 1764963 - 1765619 + | flagella basal body P-ring formation protein flgM 1766296 - 1766595 + | negative regulator of flagellin synthesis (anti-sigma-28 factor) flgN 1766607 - 1767047 + | flagella synthesis protein TERM 2344 1767069 - 1767104 + T 95 -8.5 -4.98061 | opp_overlap 1767069 1767071 1767072, overlap 1767071 1767072 TTTATAATTAAAGAA TAGTCCCTGTATTAT TTCAAT ATAATACAGGGAGTG TTTTGTTTAATATAT TERM 2345 1767071 - 1767102 + T 85 -8.9 -4.09862 | opp_overlap 1767071 1767069 1767072, overlap 1767069 1767072 TATAATTAAAGAATA GTCCCTGTATTAT TTCAAT ATAATACAGGGAG TGTTTTGTTTAATAT TERM 2346 1767102 - 1767071 - T 80 -8.9 -3.64905 | opp_overlap 1767069 1767071 1767072, overlap 1767069 1767072 TATAATTAAAGAATA GTCCCTGTATTAT TTCAAT ATAATACAGGGAG TGTTTTGTTTAATAT TERM 2347 1767101 - 1767072 - T 89 -12.4 -2.77858 | opp_overlap 1767071 1767069 1767072, overlap 1767071 1767069 ATAATTAAAGAATAG TCCCTGTATTAT TTCAAT ATAATACAGGGA GTGTTTTGTTTAATA TERM 2348 1767072 - 1767101 + T 90 -12.4 -3.04291 | opp_overlap 1767072 1767071 1767069, overlap 1767071 1767069 ATAATTAAAGAATAG TCCCTGTATTAT TTCAAT ATAATACAGGGA GTGTTTTGTTTAATA floA 1768478 - 1767216 - | haemagglutinin TERM 2349 1767411 - 1767395 - G 70 -9.5 -2.65632 | overlap 1767394 1767392 1767397 CACCAAGAAATATAC TATCCTC AGC GAGGATA TGAAAAACACTATTA TERM 2350 1768221 - 1768239 + g 80 -4.6 -5.1861 | opp_overlap 1768209 1768208 1768221, overlap 1768213 AACCTCATTAATAAT TAATTCTG CTT CAGCATTA TTTTTTAATGATAAA TERM 2351 1768832 - 1768853 + r 95 -10.3 -4.35675 | opp_overlap 1768832 TTAAACTAAAAAAAA CCACTAAAT GATG ATTTAGTGG TTTTAGTAGATTTTT TERM 2352 1768853 - 1768832 - R 100 -10.3 -6.02546 | opp_overlap 1768832 TTAAACTAAAAAAAA CCACTAAAT GATG ATTTAGTGG TTTTAGTAGATTTTT flhA 1770974 - 1768884 - | flagellar biosynthesis protein TERM 2353 1770914 - 1770896 - G 78 -7.4 -4.35682 | opp_overlap 1770899, overlap 1770893 1770897 GTATAAGCAAAATAA GTACTGGC CCT GCCAGTAT CTGCCACTGAGAACT TERM 2354 1770913 - 1770897 - G 79 -10.9 -3.20325 | opp_overlap 1770899, overlap 1770896 1770893 TATAAGCAAAATAAG TACTGGC CCT GCCAGTA TCTGCCACTGAGAAC flhB 1772115 - 1770967 - | flagellar biosynthetic protein TERM 2355 1772380 - 1772398 + r 85 -10.3 -3.45634 | opp_overlap 1772380 CACCATCAAACAAAA GCCGCTT AGATA AAGCGGC TTACATTTTCTTCAA TERM 2356 1772398 - 1772380 - R 100 -10.3 -4.95484 | opp_overlap 1772380 CACCATCAAACAAAA GCCGCTT AGATA AAGCGGC TTACATTTTCTTCAA cheZ 1773200 - 1772544 - | chemotaxis phosphatase TERM 2357 1773012 - 1772995 - G 79 -11.3 -2.58253 | opp_overlap 1772994 1772991, overlap 1772991 1772986 ACACAATTTAATGTA CGCTCAG CTGC CTGAGCG GTCATTTGAGCAACA TERM 2358 1773128 - 1773106 - G 72 -8.4 -3.55622 | opp_overlap 1773106 1773110, overlap 1773107 CCTAATTCTCGCAAA CTGTCGCGTA ACA TACGCGTCAA TTGTCCGATCCGACT TERM 2359 1773127 - 1773107 - G 70 -9.7 -2.73159 | opp_overlap 1773106 1773110, overlap 1773106 CTAATTCTCGCAAAC TGTCGCGTA ACA TACGCGTCA ATTGTCCGATCCGAC TERM 2360 1773110 - 1773124 + g 72 -10 -2.60079 | opp_overlap 1773107 1773106, overlap 1773106 ATTCTCGCAAACTGT CGCGTA ACA TACGCG TCAATTGTCCGATCC cheY 1773599 - 1773210 - | chemotaxis response regulator TERM 2361 1773678 - 1773703 + r 89 -10.5 -3.84514 | ATACGCAATGATTGT GTTGTGCTGAT TTTC ATCAGCACGGC TTTACTCATTGAGCT cheB 1774711 - 1773659 - | chemotaxis response regulator protein-glutamate methylesterase cheR 1775594 - 1774704 - | chemotaxis protein methyltransferase TERM 2362 1775418 - 1775444 + g 73 -5.8 -4.48713 | overlap 1775417 TTCACGTAACCTCCT CGTGAGACGGTT ATA AACCATTTCCCG TTTGTTGTTAGTCAG PMI1665 1777247 - 1775601 - | methyl-accepting chemotaxis protein TERM 2363 1777028 - 1777038 + g 73 -6.8 -4.25681 | CAGTTTTCATTCCTA TCGC AAC GCGA TTTATTGCATTACGT TERM 2364 1777171 - 1777148 - G 73 -8.2 -3.89354 | opp_overlap 1777148 TGTTTAAATGAATAA TTCCCAGTGA GATC CCACTGGAAA TAACTTGCATCACAC TERM 2365 1777266 - 1777286 + r 71 -8.3 -3.30338 | opp_overlap 1777266 TTCACCTCGTTATAA GCGGTAG CAAATCA CTACCGC TTGTCAGCCACTTGT TERM 2366 1777286 - 1777266 - R 78 -9.7 -3.29511 | opp_overlap 1777266 TTCACCTCGTTATAA GCGGTAGCA AAT CACTACCGC TTGTCAGCCACTTGT PMI1666 1779013 - 1777307 - | methyl-accepting chemotaxis protein TERM 2367 1779330 - 1779305 - R 100 -11.2 -5.23016 | opp_overlap 1779305 AAATAATTGAAAAAA CTATTCCGGC AAGATA GCCGGAACAG TATTAAAGAATAAGA TERM 2368 1779305 - 1779330 + r 74 -9 -3.03124 | opp_overlap 1779305 AAATAATTGAAAAAA CTATTCCGGC AAGATA GCCGGAACAG TATTAAAGAATAAGA TERM 2369 1779370 - 1779352 - R 71 -8.2 -3.3056 | opp_overlap 1779351, overlap 1779350 AGAATAAGATTAATA GGCTAAAC TTT ATTTAGCC ATAATTGTTGCGCTA cheW 1779861 - 1779361 - | chemotaxis protein cheA 1782102 - 1779883 - | chemotaxis protein TERM 2370 1781567 - 1781587 + g 74 -4.7 -4.93877 | overlap 1781571 TCAGTATTTGGTGTA TTAGCCGTT GCT AGCGGTTGA TTTTCTTTACTAAGC TERM 2371 1782036 - 1781982 - G 74 -5.3 -4.77036 | opp_overlap 1781982 1781984, overlap 1781984 1782021 1782033 GCGCACTACGAAAAA TAGCATTTAACTGCT-CTTGATCTGGA TTT TGCGGATCAAGTAACAGT-AAATGCTG TTCCATATCAGCTAA TERM 2372 1782034 - 1781984 - G 75 -7.9 -4.00443 | opp_overlap 1781982 1781984, overlap 1781982 1782021 1782033 GCACTACGAAAAATA GCATTTAACTGCT-CTTGATCTGGA TTT TGCGGATCAAGTAACAGT-AAATGC TGTTCCATATCAGCT motB 1783187 - 1782138 - | chemotaxis protein (motility protein B) TERM 2373 1782246 - 1782288 + g 84 -7.9 -4.78839 | gap 1, opp_overlap 1782256 1782258, overlap 1782256 1782258 TTCGGGAAGCTTAGA TGTAGAAGAAGACACAGACG AATT CGTCTGTGTATT-TTCTCCG TTTTCTTGTGGGGTT TERM 2374 1782279 - 1782256 - G 83 -9.6 -3.83568 | opp_overlap 1782246 1782256 1782258, overlap 1782258 TTAGATGTAGAAGAA GACACAGACG AATT CGTCTGTGTA TTTTCTCCGTTTTCT TERM 2375 1782256 - 1782279 + g 91 -9.6 -4.5538 | opp_overlap 1782256 1782258, overlap 1782246 1782258 TTAGATGTAGAAGAA GACACAGACG AATT CGTCTGTGTA TTTTCTCCGTTTTCT TERM 2376 1782258 - 1782277 + g 91 -12.2 -3.86814 | opp_overlap 1782256 1782258, overlap 1782256 1782246 AGATGTAGAAGAAGA CACAGACG AATT CGTCTGTG TATTTTCTCCGTTTT TERM 2377 1782277 - 1782258 - G 89 -12.2 -3.4997 | opp_overlap 1782258 1782256 1782246, overlap 1782256 AGATGTAGAAGAAGA CACAGACG AATT CGTCTGTG TATTTTCTCCGTTTT TERM 2378 1783085 - 1783075 - G 79 -6.8 -4.59944 | ATCACCAGAAAGAAA GCCA TCA TGGC AGTCATAAAGTCAGC motA 1784083 - 1783190 - | chemotaxis protein (motility protein A) TERM 2379 1783360 - 1783374 + g 72 -4.3 -4.67942 | ATAACAGGGTGGTCT TGATG CACTC CATCA TTTTCATTTGTTGAC TERM 2380 1783968 - 1783953 - G 72 -4.6 -4.79352 | TTACCTACAACAAAA GCACCG ATAC CGGCAC CAAAAATAATTAAAA TERM 2381 1784197 - 1784164 - R 79 -8.3 -4.08853 | opp_overlap 1784163 1784165, overlap 1784165 GGGAAGAGGAAACAA CTCAGGTTATAGAGT CTTT AATCTATAACCTGAT ATTTAACTTTCAATC TERM 2382 1784196 - 1784165 - R 89 -11.8 -3.04589 | opp_overlap 1784163 1784165, overlap 1784164 GGAAGAGGAAACAAC TCAGGTTATAGAGT CTTT AATCTATAACCTGA TATTTAACTTTCAAT TERM 2383 1784165 - 1784196 + r 91 -11.8 -3.51234 | opp_overlap 1784165 1784164, overlap 1784163 GGAAGAGGAAACAAC TCAGGTTATAGAGT CTTT AATCTATAACCTGA TATTTAACTTTCAAT flhC 1784799 - 1784218 - | flagellar transcriptional activator TERM 2384 1784637 - 1784627 - G 73 -5.4 -4.58283 | opp_overlap 1784627 CAATCTGTTGAAAAA GGTA GCA TACC TTTAGGAGGAGGGCT TERM 2385 1784639 - 1784661 + g 77 -7.8 -4.19324 | AAAGGTAGCATACCT TTAGGAGGAG GGC TTCCTCTTAA TTCTTTGTATAATTT flhD 1785152 - 1784802 - | flagellar transcriptional activator TERM 2386 1785394 - 1785365 - R 72 -8.7 -3.0264 | opp_overlap 1785364 1785367, overlap 1785367 AAATGCTCGCCAATA TATCACGTTAAGA ATAA TCCTAACGAGATA ACTTTACTCCTTAAT TERM 2387 1785741 - 1785752 + r 77 -3 -5.5943 | GTTTAATAAATATTT CTAT AGAT ATAG TTTTTTTAGTCATTT TERM 2388 1787030 - 1787003 - R 80 -6.4 -4.88067 | opp_overlap 1787003 1787000 1787005, overlap 1787005 1787006 AGGTATTGATAAAAA GACTGCTTTTTT AAAC AAAAAAGCAAAC TTATTTTTATCATTT TERM 2389 1787028 - 1787005 - R 77 -7.6 -4.06182 | opp_overlap 1787003 1787000 1787005, overlap 1787003 1787006 GTATTGATAAAAAGA CTGCTTTTTT AAAC AAAAAAGCAA ACTTATTTTTATCAT TERM 2390 1787027 - 1787006 - R 74 -8.9 -3.02986 | opp_overlap 1787005 1787003 1787000, overlap 1787005 1787003 TATTGATAAAAAGAC TGCTTTTTT AAAC AAAAAAGCA AACTTATTTTTATCA PMI1673 1788071 - 1787910 - | hypothetical protein TERM 2391 1788108 - 1788121 + r 87 -5.3 -5.56673 | ATTTAAAATAAGTTT CCATT GATA AATGG TTTTTTATTATAGAT mgtC 1789172 - 1788474 - | Mg(2+) transport ATPase protein C TERM 2392 1789223 - 1789206 - R 72 -2.7 -5.43866 | gap 1, overlap 1789208 1789209 CAATGGCTAAAAAAA CACGCCGT TAT ACGGC-TA ATGAAGTAATACAAC TERM 2393 1789221 - 1789209 - R 77 -9.1 -3.19966 | overlap 1789208 1789206 TGGCTAAAAAAACAC GCCGT TAT ACGGC TAATGAAGTAATACA TERM 2394 1789384 - 1789420 + r 85 -6.7 -5.08015 | opp_overlap 1789391, overlap 1789373 1789386 TGCACTGCCCACCGG TAGGTAAGCAGTTTT AGCGGAG AAAACGGCTTACCAA TTTATTTTTTGCATT TERM 2395 1789386 - 1789418 + r 72 -9.3 -2.75795 | opp_overlap 1789391, overlap 1789373 1789384 CACTGCCCACCGGTA GGTAAGCAGTTTT AGCGGAG AAAACGGCTTACC AATTTATTTTTTGCA dsrB 1789731 - 1789537 - | protein DsrB TERM 2396 1789611 - 1789597 - G 79 -5 -5.14563 | TTTTTCATTAAAAAA CCAAAT ACC ATTCGG ATATTCAGGCAGTGA TERM 2397 1789812 - 1789789 - R 100 -14.6 -5.38958 | ACCCATAAAGAAAAA GCCTGCCACC AGAA GGTGACAGGC TTGAAGAAAATTTTT cspC 1790052 - 1789840 - | cold shock-like protein TERM 2398 1790288 - 1790278 - H 87 -5.4 -5.66989 | GAAAGATTAAAAAAA TGCA AAT TGCA CATAAAAAATACAAA PMI1677 1790508 - 1791014 + | hypothetical protein TERM 2399 1791057 - 1791027 - f 100 -13.5 -4.01853 | TAATACTATGAGAAA TTCTCCGTGTTAT TGCAC ACAACACGGAGAA CCTTAACCATTTTTT TERM 2400 1791285 - 1791265 - f 73 -8.2 -3.48063 | opp_overlap 1791267, overlap 1791267 GAGCCAAATTTAGAA GAGCCCGC TTTAT GCGGGCTT TTTGCTTTTCTAAAT TERM 2401 1791283 - 1791267 - f 85 -10.8 -3.30797 | opp_overlap 1791267, overlap 1791265 GCCAAATTTAGAAGA GCCCGC TTTAT GCGGGC TTTTTGCTTTTCTAA TERM 2402 1791267 - 1791283 + F 100 -10.8 -5.1417 | opp_overlap 1791267 1791265 GCCAAATTTAGAAGA GCCCGC TTTAT GCGGGC TTTTTGCTTTTCTAA TERM 2403 1791407 - 1791425 + F 81 -3.2 -5.72207 | overlap 1791406 CGGTGCACTCTTGAG CAAACAAA CAT TTTTTTTG TTTTTTTGCTTTACA TERM 2404 1791598 - 1791572 - f 82 -10.9 -2.66748 | opp_overlap 1791577, overlap 1791577 GAGGAGCCAAATTTA GAAAAGCCCGC TTTAT GCGGGCTTTTT GCTTTTTTAATGCCC TERM 2405 1791593 - 1791577 - f 100 -10.8 -4.51196 | opp_overlap 1791577, overlap 1791572 GCCAAATTTAGAAAA GCCCGC TTTAT GCGGGC TTTTTGCTTTTTTAA TERM 2406 1791577 - 1791593 + F 100 -10.8 -5.25735 | opp_overlap 1791577 1791572 GCCAAATTTAGAAAA GCCCGC TTTAT GCGGGC TTTTTGCTTTTTTAA TERM 2407 1791769 - 1791744 - f 78 -9.1 -3.38991 | opp_overlap 1791764, overlap 1791742 1791748 AGGGCGGTAAGAATA TCAACACAGTA TATA TACTGTGCCGA AATCGGTATAATTTT TERM 2408 1791765 - 1791748 - f 76 -8.5 -3.46509 | opp_overlap 1791764, overlap 1791744 1791742 CGGTAAGAATATCAA CACAGTA TATA TACTGTG CCGAAATCGGTATAA TERM 2409 1791988 - 1792004 + F 100 -10.8 -5.18355 | opp_overlap 1791988 GCCAAATTTAGAGAA GCCCGC TTTAT GCGGGC TTTTTGCTTTTTAGC TERM 2410 1792004 - 1791988 - f 89 -10.8 -3.57797 | opp_overlap 1791988 GCCAAATTTAGAGAA GCCCGC TTTAT GCGGGC TTTTTGCTTTTTAGC pyrC 1792488 - 1793540 + | dihydroorotase TERM 2411 1793567 - 1793609 + F 79 -5 -5.28683 | gap 1 TTGATATCTTCTTTT TATGCACCAT-ATAACCCC TTATCT GGGATAGTTATGGTGCATA TTTTTTGCTATTCCT TERM 2412 1793777 - 1793766 - g 75 -3 -5.32882 | TATGAGTAGAAAAAA TGAA GTTA TTCA AACACATCCTGTTGT PMI1679 1793752 - 1794006 + | hypothetical protein TERM 2413 1794041 - 1794071 + F 100 -9.1 -5.34365 | gap 1, opp_overlap 1794036 1794044 1794045 1794047, overlap 1794044 1794045 AAAGCATTAAGACAC CAAG-CAGGAGTAC TTTC GTACTCCTGTCTCG TTTTTATTGTTATAA TERM 2414 1794067 - 1794044 - f 80 -9.6 -3.38951 | opp_overlap 1794044 1794041 1794045, overlap 1794036 1794045 1794047 GCATTAAGACACCAA GCAGGAGTAC TTTC GTACTCCTGT CTCGTTTTTATTGTT TERM 2415 1794044 - 1794068 + F 80 -9.4 -3.44752 | gap 1, opp_overlap 1794036 1794044 1794045 1794047, overlap 1794041 1794045 GCATTAAGACACCAA G-CAGGAGTAC TTTC GTACTCCTGTC TCGTTTTTATTGTTA TERM 2416 1794066 - 1794045 - f 100 -13.1 -2.62889 | opp_overlap 1794045 1794044 1794041, overlap 1794044 1794036 1794047 CATTAAGACACCAAG CAGGAGTAC TTTC GTACTCCTG TCTCGTTTTTATTGT TERM 2417 1794045 - 1794066 + F 100 -13.1 -3.26262 | opp_overlap 1794044 1794036 1794045 1794047, overlap 1794044 1794041 CATTAAGACACCAAG CAGGAGTAC TTTC GTACTCCTG TCTCGTTTTTATTGT TERM 2418 1794064 - 1794047 - f 79 -9.9 -2.84803 | opp_overlap 1794045 1794044 1794041, overlap 1794045 1794044 1794036 TTAAGACACCAAGCA GGAGTAC TTTC GTACTCC TGTCTCGTTTTTATT rcsA 1794321 - 1794923 + | colanic acid capsular biosynthesis activation protein (LuxR-family transcriptional regulator) ttrA 1798343 - 1795263 - | tetrathionate reductase subunit A TERM 2419 1795444 - 1795454 + g 71 -6.8 -4.0641 | AAATAGTGTTGACGT GAGC CTA GCTC TTTATGTCCATAACC ttrC 1799364 - 1798336 - | tetrathionate reductase subunit C ttrB 1800101 - 1799361 - | tetrathionate reductase subunit B TERM 2420 1799457 - 1799447 - G 89 -5.4 -5.50925 | opp_overlap 1799450, overlap 1799448 1799449 AACCAAGATAAAAAA CTTG TGG CAAG GTGCCACTTTCTGGT TERM 2421 1799450 - 1799464 + g 89 -10 -4.14725 | opp_overlap 1799447 1799449 1799448 CAAGATAAAAAACTT GTGGCA AGG TGCCAC TTTCTGGTTTAAGTA ttrS 1800265 - 1802028 + | two component system sensor kinase of tetrathionate reductase complex ttrR 1802039 - 1802641 + | two component system response regulator of tetrathionate reductase complex htrB 1802716 - 1803657 + | lipid A biosynthesis lauroyl acyltransferase (heat shock protein B) TERM 2422 1805078 - 1805096 + G 83 -5.2 -5.31545 | overlap 1805080 1805081 TAGAGCTGTTTTTTA TTTCACCG CTG CGGTGGTA TTTTTTAATCTTATT TERM 2423 1805080 - 1805094 + G 77 -7.8 -4.26398 | overlap 1805078 1805081 GAGCTGTTTTTTATT TCACCG CTG CGGTGG TATTTTTTAATCTTA TERM 2424 1805081 - 1805093 + G 70 -9.1 -3.14212 | overlap 1805080 1805078 AGCTGTTTTTTATTT CACCG CTG CGGTG GTATTTTTTAATCTT mdtG 1803942 - 1805150 + | multidrug resistance protein (MFS-family transporter) PMI1688 1805571 - 1807106 + | di-/tripeptide transporter TERM 2425 1807148 - 1807184 + F 100 -10.4 -5.63504 | opp_overlap 1807158 TATAACTCAACTACG CTCCTCAAATTAGA CACTTCTAC TCTAATTTGGGGAG TTTTTTTATAAAATT TERM 2426 1807257 - 1807241 - f 72 -3.7 -5.22481 | opp_overlap 1807241 TAGAAATAAAGAAAA TAGATCT CAC AGCTCTA TGTCCTGAAAGTGAC PMI1689 1807417 - 1807731 + | hypothetical protein PMI1690 1807896 - 1808675 + | hypothetical protein TERM 2427 1808703 - 1808683 - f 83 -8.4 -4.19735 | opp_overlap 1808681 1808680 1808683 CCTTTTAAAATTAAA GAGGAATA TCATC TATTCCTC TCCTTTGCTTTCATT TERM 2428 1808683 - 1808703 + F 70 -8.4 -3.08604 | opp_overlap 1808683, overlap 1808681 1808680 CCTTTTAAAATTAAA GAGGAATA TCATC TATTCCTC TCCTTTGCTTTCATT PMI1691 1808776 - 1809198 + | thioesterase superfamilyl protein TERM 2429 1809206 - 1809240 + T 70 -4.5 -4.82819 | TTTTATAACCGCTAA TCTGTCGTTTT ATTCTTCAAATTA AAAACGACAGA TTTTATTATGCTGTG TERM 2430 1809399 - 1809375 - T 88 -11.6 -3.35011 | overlap 1809373 ACATGTAAAGCAAGA GTTATCCACA GTTAA TGTGGATAAC AAGAAAGACGTTGCA PMI1692 1809745 - 1809428 - | hypothetical protein TERM 2431 1809891 - 1809865 - R 100 -11.8 -5.10461 | opp_overlap 1809865 GGTAGTCAACAAAAA GCCTTTAATAAC AAT ATTATTAAAGGC TTTAGTTCTATTTCA TERM 2432 1809865 - 1809891 + r 93 -11.1 -4.11501 | opp_overlap 1809865 GGTAGTCAACAAAAA GCCTTTAATAA CAATA TTATTAAAGGC TTTAGTTCTATTTCA PMI1693 1810537 - 1809899 - | acetyltransferase TERM 2433 1810629 - 1810651 + r 74 -7 -4.1585 | opp_overlap 1810629 ATCATGACTAAGCAA TCCGTGGTTG TAA CAATAACGGA TTTTGAACCTTATCC PMI1694 1811897 - 1810806 - | NADH-dependent flavin oxidoreductase PMI1695 1812432 - 1812166 - | hypothetical protein TERM 2434 1812771 - 1812751 - H 73 -8.3 -3.55563 | opp_overlap 1812751 ATTTTATCGGTGAAA TGCTCCC TGAGGAG GGGAGCA TTTCTGACACAGAAC TERM 2435 1812751 - 1812771 + H 81 -9 -3.85698 | opp_overlap 1812751 ATTTTATCGGTGAAA TGCTCCCT GAGGA GGGGAGCA TTTCTGACACAGAAC rssB 1813416 - 1814081 + | swarming motility regulation two-component system, response regulator rssA 1814082 - 1815485 + | swarming motility regulation two-component system, sensor kinase TERM 2436 1815518 - 1815489 - T 71 -7.9 -3.51793 | opp_overlap 1815491, overlap 1815487 1815491 GATAACGAGTAAATA TATTGTAGGAGGC CTTT GCCTCCTATAATT TTAGTTAAAACTATT TERM 2437 1815516 - 1815491 - T 83 -10.5 -3.32233 | opp_overlap 1815491, overlap 1815489 1815487 TAACGAGTAAATATA TTGTAGGAGGC CTTT GCCTCCTATAA TTTTAGTTAAAACTA TERM 2438 1815491 - 1815516 + T 100 -12.7 -4.41494 | opp_overlap 1815491 1815489 1815487 TAACGAGTAAATATA TTGTAGGAGGC CTTT GCCTCCTATAA TTTTAGTTAAAACTA PMI1698 1815871 - 1815542 - | hypothetical protein PMI1699 1816530 - 1815868 - | branched-chain amino acid transporter TERM 2439 1816565 - 1816580 + H 72 -2.6 -5.41143 | overlap 1816557 GAACGATTTGTTCAT TATGTT GAAC GACATA TTTTTTTGCAAGCTG TERM 2440 1816694 - 1816678 - g 86 -2.2 -6.04953 | AGAGAAAGAAAAAAA GCAGGT CTTTC ACTTGC AGAAATCGCAAGGCG PMI1700 1816615 - 1817175 + | transcriptional regulator PMI1701 1818095 - 1817238 - | D-alanine aminotransferase TERM 2441 1817609 - 1817584 - G 83 -9.1 -4.03995 | gap 1, opp_overlap 1817583 1817585, overlap 1817582 TCTTTGATAAAAATA GCATCATCAGCA CCT TGCTGATG-CGC ATGATGTTTTGCTAA PMI1702 1818282 - 1818860 + | hypothetical protein TERM 2442 1818917 - 1818891 - T 100 -16.8 -3.65199 | opp_overlap 1818878 1818877 AATTTGTTATTTAAA TTTAGAGCCACA CAA TGTGGCTCTAAA TCGTAAGCAAAAAAG PMI1703 1820577 - 1818940 - | hypothetical protein TERM 2443 1821040 - 1821000 - H 71 -7 -4.10934 | gap 1, opp_overlap 1821000 ATAACTAAGCATAAA GCCAGAAAATGCACTCT ATATCGCA AGAG-GCACTATCTGGC TTTTATTTTCTATCT TERM 2444 1821000 - 1821040 + H 79 -4.8 -5.24647 | gap 1, opp_overlap 1821000 ATAACTAAGCATAAA GCCAGAAAATGCACTCT ATATCGCA AGAG-GCACTATCTGGC TTTTATTTTCTATCT PMI1704 1821177 - 1822433 + | mechanosensitive ion channel protein TERM 2445 1822472 - 1822456 - f 83 -8 -4.21194 | opp_overlap 1822456 GTTCATTATTTAAAA GGGAGA TTAAT TCTCCC TTTTTTCTATTAAAT TERM 2446 1822456 - 1822472 + F 100 -8 -5.48063 | opp_overlap 1822456 GTTCATTATTTAAAA GGGAGA TTAAT TCTCCC TTTTTTCTATTAAAT dmsA 1822787 - 1825225 + | dimethyl sulfoxide reductase chain A dmsB 1825237 - 1825854 + | anaerobic dimethyl sulfoxide reductase chain B dmsC 1825858 - 1826634 + | anaerobic dimethyl sulfoxide reductase chain C TERM 2447 1826744 - 1826713 - T 100 -10.4 -5.09521 | opp_overlap 1826718, overlap 1826718 GCAAGAAACGAAAAA CAAAATGCATATCT TTTT AGATATGCATTTTT TCTTTTTAGAATGAG TERM 2448 1826718 - 1826739 + T 100 -10.3 -5.93252 | opp_overlap 1826713 1826718 AAACGAAAAACAAAA TGCATATCT TTTT AGATATGCA TTTTTTCTTTTTAGA TERM 2449 1826739 - 1826718 - T 100 -10.3 -5.36689 | opp_overlap 1826718, overlap 1826713 AAACGAAAAACAAAA TGCATATCT TTTT AGATATGCA TTTTTTCTTTTTAGA PMI1708 1827292 - 1826750 - | hypothetical protein TERM 2450 1827439 - 1827416 - H 72 -2.5 -5.36181 | opp_overlap 1827416 AAACAAAAAAATAAA TCCTCTT TAAAGGCAAC AAGAGGA TTTTAATCACGTCCT TERM 2451 1827986 - 1828020 + G 90 -8.6 -5.00027 | opp_overlap 1827989 1827991, overlap 1827991 CTTTTCTTATCGCAA TAACATGGCCATTGAG TTT CCCAATGGCCATTATA TTTTCTATTTTTGGT TERM 2452 1828017 - 1827989 - g 90 -12.5 -3.65046 | opp_overlap 1827986 1827991, overlap 1827991 TTCTTATCGCAATAA CATGGCCATTGAG TTT CCCAATGGCCATT ATATTTTCTATTTTT TERM 2453 1827991 - 1828015 + G 100 -12.9 -4.09627 | opp_overlap 1827989 1827991, overlap 1827986 CTTATCGCAATAACA TGGCCATTGAG TTT CCCAATGGCCA TTATATTTTCTATTT TERM 2454 1828015 - 1827991 - g 100 -15.1 -3.40611 | opp_overlap 1827991 1827986, overlap 1827989 CTTATCGCAATAACA TGGCCATTGAG TTT CCCAATGGCCA TTATATTTTCTATTT PMI1709 1827859 - 1828038 + | hypothetical protein TERM 2455 1828230 - 1828194 - T 87 -11.1 -3.53779 | TGTTTAAAATAGTAA TCTTCAACAGAGATATC TAA AAAATCTCTGTTGAAAA GAAAATATAATTTAT PMI1710 1829552 - 1828299 - | phage protein TERM 2456 1828523 - 1828547 + g 77 -7.9 -4.2704 | opp_overlap 1828510 1828523 1828522 AATCCATACTAATAT GGACTGACTGA CCA TCAGTTAATCC TTTATTACTACTAAA TERM 2457 1829512 - 1829533 + g 90 -9.5 -4.35581 | gap 1 GGCACAACTGTTTTA TCCCC-TTGC GTG GCAAAGGGGA TTTTAAATATTTTAG PMI1711 1830214 - 1829558 - | phage protein PMI1712 1831398 - 1830211 - | phage protein PMI1713 1831735 - 1831391 - | phage protein TERM 2458 1831488 - 1831476 - G 80 -7.7 -4.35675 | AAAAAGGCATTAAAA TGGCT GAT AGCCA CAACTTCCTCGATTT PMI1714 1832424 - 1831732 - | phage protein PMI1715 1833239 - 1832427 - | phage protein PMI1716 1833528 - 1833208 - | phage protein PMI1717 1834029 - 1833541 - | phage protein PMI1718 1836335 - 1834032 - | phage protein PMI1719 1836876 - 1836418 - | phage protein TERM 2459 1836912 - 1836897 - R 100 -10.4 -5.63504 | AACTCCATAAAAAAA GGCGAC CGAA GTCGCC ATGATAAAAAGTAAG PMI1720 1837388 - 1836936 - | phage protein PMI1721 1838886 - 1837399 - | phage protein TERM 2460 1838734 - 1838702 - G 72 -10 -2.71924 | gap 1, opp_overlap 1838694, overlap 1838701 TATTGGCGGGCAAAT TGCGCTTCTGGAGAA TCAG CTC-CCAGAAACGCA TCAACTTGACCAGAA PMI1722 1839407 - 1838895 - | phage protein TERM 2461 1839091 - 1839112 + g 71 -7.3 -3.89572 | opp_overlap 1839089 1839092, overlap 1839092 GATTCAATAAAAGGC AGCGAATGA ATGA TCATTCGCG TTGTTCTAATTAAAT TERM 2462 1839092 - 1839111 + g 78 -10.8 -2.9302 | opp_overlap 1839092 1839089, overlap 1839091 ATTCAATAAAAGGCA GCGAATGA ATGA TCATTCGC GTTGTTCTAATTAAA TERM 2463 1839111 - 1839092 - G 77 -10.8 -2.85242 | opp_overlap 1839091 1839092, overlap 1839089 ATTCAATAAAAGGCA GCGAATGA ATGA TCATTCGC GTTGTTCTAATTAAA PMI1723 1839893 - 1839444 - | phage protein (endopeptidase/lysis protein) PMI1724 1840294 - 1839890 - | phage protein PMI1725 1840596 - 1840297 - | phage holin (lysis protein) TERM 2464 1840864 - 1840830 - R 100 -13 -4.33907 | opp_overlap 1840829 1840837, overlap 1840837 GATAAATATTGAAAA CAAAAAAGCCCCACTT CAA AAGTGAGGCTTCTTAG ATTTTGCTGAGAGCT TERM 2465 1840857 - 1840837 - R 100 -11.9 -5.80951 | opp_overlap 1840829 1840837, overlap 1840830 ATTGAAAACAAAAAA GCCCCACTT CAA AAGTGAGGC TTCTTAGATTTTGCT TERM 2466 1840837 - 1840857 + r 83 -9.7 -3.82481 | opp_overlap 1840837 1840830, overlap 1840829 ATTGAAAACAAAAAA GCCCCACTT CAA AAGTGAGGC TTCTTAGATTTTGCT PMI1726 1841793 - 1840978 - | phage antitermination protein PMI1727 1842039 - 1842776 + | phage repressor protein TERM 2467 1842858 - 1842811 - T 77 -10 -2.56773 | opp_overlap 1842812, overlap 1842808 1842810 TGAAAAAGTGAATAG TGCTAACACTAGGCTTACTGAT ATTC ACCGTTAAGCCTAATGTTAGCT TTTTTAAATACAATA TERM 2468 1842812 - 1842857 + T 100 -11.3 -5.09225 | opp_overlap 1842808 1842811 1842810 GAAAAAGTGAATAGT GCTAACACTAGGCTTACTGAT ATTC ACCGTTAAGCCTAATGTTAGC TTTTTTAAATACAAT PMI1728 1843895 - 1842876 - | tryptophanyl-tRNA synthetase TERM 2469 1844002 - 1844030 + H 76 -7.4 -4.31688 | opp_overlap 1844001, overlap 1844004 AAAGATAAATAGGAC TAGGTGCCGCTT AAATA AAGCGCCACCAA TTTTGAATTGATCTT TERM 2470 1844004 - 1844028 + H 77 -10 -2.50034 | opp_overlap 1844001, overlap 1844002 AGATAAATAGGACTA GGTGCCGCTT AAATA AAGCGCCACC AATTTTGAATTGATC TERM 2471 1844177 - 1844204 + H 71 -8.4 -3.34902 | opp_overlap 1844178, overlap 1844175 1844178 TGGAGATAAGAAAAA ACCCGTTACCTC TTAC GAGATAACGGGC TCTTATATGGTGCCG TERM 2472 1844203 - 1844178 - H 100 -14.1 -5.60689 | opp_overlap 1844177 1844175 1844178 GGAGATAAGAAAAAA CCCGTTACCTC TTAC GAGATAACGGG CTCTTATATGGTGCC TERM 2473 1844178 - 1844203 + H 87 -11.9 -2.6062 | opp_overlap 1844178, overlap 1844177 1844175 GGAGATAAGAAAAAA CCCGTTACCTC TTAC GAGATAACGGG CTCTTATATGGTGCC TERM 2474 1844431 - 1844450 + H 71 -5.2 -4.56702 | GTCTAGTCCTGATGA TAAAAAAA ATGT TTTTTTTA TTTGTTTGCTTAAAC TERM 2475 1844596 - 1844623 + H 71 -8.4 -3.34902 | opp_overlap 1844597, overlap 1844594 1844597 AAAAGATAAGAAAAA ACCCGCTATCTC TTAC GAGATAACGGGC TCTTATATGGTGCCG TERM 2476 1844597 - 1844622 + H 87 -11.9 -2.6062 | opp_overlap 1844597, overlap 1844596 1844594 AAAGATAAGAAAAAA CCCGCTATCTC TTAC GAGATAACGGG CTCTTATATGGTGCC TERM 2477 1844622 - 1844597 - H 100 -14.1 -5.66338 | opp_overlap 1844597 1844596 1844594 AAAGATAAGAAAAAA CCCGCTATCTC TTAC GAGATAACGGG CTCTTATATGGTGCC TERM 2478 1846661 - 1846699 + G 71 -4.8 -4.58213 | opp_overlap 1846650, overlap 1846650 1846664 1846666 ATATTAAACCTAGTT TACTTTTATTTAATGATG GCC CAGCATTAAGTAAGATTA TTTTATCATTGATTA TERM 2479 1846664 - 1846696 + G 74 -6.5 -4.38322 | overlap 1846661 1846666 TTAAACCTAGTTTAC TTTTATTTAATGATG GCC CAGCATTAAGTAAGA TTATTTTATCATTGA TERM 2480 1847165 - 1847151 - g 79 -5.8 -4.84761 | ATACTTTGATAAAAA TAAAGA GAA TCTTTA CTCAGAATACGATAT rsbA 1845004 - 1847697 + | swarming behavior regulation two-component system, sensor kinase rcsB 1847715 - 1848371 + | two component system, response regulator (capsular synthesis regulator component B) TERM 2481 1848409 - 1848444 + T 79 -3.3 -5.61689 | gap 1, opp_overlap 1848410 1848413, overlap 1848410 1848413 GCTGTATAGATAAAA TCAG-GAAGCTCATAC CCATT GTGGGAGCTTCTCTGC TTTTTTATTACTTTT rcsC 1851447 - 1848619 - | two component system, [includes both sensor kinase and response regulator domains] (capsular synthesis regulator component C) TERM 2482 1849703 - 1849715 + g 71 -6.3 -4.19817 | TGGACACGAACCGGA TCGTT ATT AACGA TTTTAGGTACATCCG TERM 2483 1851528 - 1851542 + r 71 -2.9 -5.31877 | opp_overlap 1851522 1851520 TGAATGAGATGATCT TTATC ATCAG GATAA TTTTTTCTGATGACT TERM 2484 1851599 - 1851615 + r 100 -9.4 -5.72207 | opp_overlap 1851599 TTATAATATAAAAAA GCAGGC ATTCC GCCTGC TTTTTTTGCTTTAAG TERM 2485 1851615 - 1851599 - R 100 -10.1 -5.5208 | opp_overlap 1851599 TTATAATATAAAAAA GCAGGCA TTC CGCCTGC TTTTTTTGCTTTAAG gyrA 1854281 - 1851648 - | DNA gyrase subunit A ubiG 1854466 - 1855203 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2486 1855297 - 1855325 + F 75 -8.2 -3.62522 | GTTTTAAGTTTCTGA CTGCCTGTATTT ATGCA GGGTACAGGCAG TTGTTAAAAAAATTA TERM 2487 1855866 - 1855841 - g 76 -4.7 -5.10497 | gap 1, opp_overlap 1855841 1855857 AATTTACGTAAAAAA GCCTATGG-TCA ATT TGAGCCACCGGC ATTGTATGATCACGT TERM 2488 1857342 - 1857320 - g 73 -2.1 -5.29782 | GATACTTATAAAAAA TCATTAG ATGTACTGA CTAATGA ACCTCTGCATTATGA nrdA 1855565 - 1857856 + | ribonucleoside-diphosphate reductase 1 alpha chain TERM 2489 1858005 - 1858027 + G 88 -11.4 -3.51406 | opp_overlap 1858001 1857996, overlap 1858001 1858000 1858006 TGAAAAGCAACTCTC TTTCTTCTGG CGT CCAGAAGAAG TTGATGTTTCTCGTG TERM 2490 1858006 - 1858026 + G 83 -12.7 -2.70121 | opp_overlap 1858001 1857996, overlap 1858005 1858001 1858000 GAAAAGCAACTCTCT TTCTTCTGG CGT CCAGAAGAA GTTGATGTTTCTCGT TERM 2491 1858263 - 1858276 + G 72 -4.5 -4.8083 | overlap 1858260 TCGTAATATCGTCAA CGATC CGTC GGTCG TTTTTGATGATATTG nrdB 1857868 - 1858998 + | ribonucleoside-diphosphate reductase 1, beta subunit TERM 2492 1859060 - 1859039 - g 75 -10.1 -2.93393 | opp_overlap 1859042, overlap 1859038 1859042 TGGCATCTCATAAAG TGACCCTGC ACCA GCAGGGTCT ATCAACCGCATTAGA TERM 2493 1859057 - 1859042 - g 72 -10.4 -2.7083 | opp_overlap 1859042, overlap 1859039 1859038 CATCTCATAAAGTGA CCCTGC ACCA GCAGGG TCTATCAACCGCATT TERM 2494 1859042 - 1859057 + G 73 -10.4 -2.87463 | opp_overlap 1859039 1859038 1859042 CATCTCATAAAGTGA CCCTGC ACCA GCAGGG TCTATCAACCGCATT PMI1736 1859023 - 1859301 + | ferredoxin PMI1737 1859409 - 1859642 + | lipoprotein TERM 2495 1859637 - 1859648 + F 81 -3 -5.71983 | ATGGTTGAGCTTGAT GATT AATT AATC TTTTTTTGTCATTCA TERM 2496 1859708 - 1859684 - f 70 -7.1 -3.67954 | opp_overlap 1859687, overlap 1859673 1859686 1859687 CAAAGACATGTTAAA TAGCGCCAACA TTT TGTTGGCGTTT TTTTATATCCCCTTT TERM 2497 1859706 - 1859686 - f 80 -9.7 -3.4096 | opp_overlap 1859687, overlap 1859684 1859673 1859687 AAGACATGTTAAATA GCGCCAACA TTT TGTTGGCGT TTTTTTATATCCCCT TERM 2498 1859705 - 1859687 - f 100 -13.2 -2.63853 | opp_overlap 1859687, overlap 1859686 1859684 1859673 AGACATGTTAAATAG CGCCAACA TTT TGTTGGCG TTTTTTTATATCCCC TERM 2499 1859687 - 1859705 + F 100 -13.2 -5.71712 | opp_overlap 1859687 1859686 1859684 1859673 AGACATGTTAAATAG CGCCAACA TTT TGTTGGCG TTTTTTTATATCCCC tyrP 1859833 - 1861044 + | tyrosine-specific transport protein TERM 2500 1861099 - 1861076 - T 100 -14 -5.43974 | AAAATCAAATAAAAA GCAGGTGTTA ATTG TAACACCTGC TAAAAATAAATAACT PMI1739 1861691 - 1861149 - | hypothetical protein TERM 2501 1861667 - 1861652 - G 73 -7.6 -4.12254 | CATTAGCAGAAATAA GCAATG CGCT CATTGC TCCTAATAATAAAAA katA 1861974 - 1863428 + | catalase TERM 2502 1863472 - 1863492 + T 83 -8.2 -4.19336 | opp_overlap 1863472, overlap 1863489 TCGGCAAAATAATAA GGCGCCTG TAGTT TGGGCGCC TTTCTTAAAGTCGTT TERM 2503 1863492 - 1863472 - T 74 -6.8 -4.20868 | opp_overlap 1863472 1863489 TCGGCAAAATAATAA GGCGCC TGTAGTTTG GGCGCC TTTCTTAAAGTCGTT menE 1864948 - 1863524 - | O-succinylbenzoic acid--CoA ligase menC 1865907 - 1864936 - | O-succinylbenzoate-CoA synthase TERM 2504 1865878 - 1865861 - G 72 -8.4 -3.48824 | overlap 1865859 TAGCGCAGAACAACA CCTGCC TCCATT GGCAGG CTGAATGAATAGAGT menB 1866764 - 1865907 - | naphthoate synthase yfbB 1867544 - 1866777 - | acyl-CoA thioester hydrolase TERM 2505 1866840 - 1866820 - G 75 -9.7 -3.4178 | opp_overlap 1866831, overlap 1866821 1866823 ATCACCGCAGCATAA GCATCAGGC TGT GCCTGATGG GCATTATGACCAGCT TERM 2506 1866839 - 1866821 - G 90 -13.2 -2.64747 | opp_overlap 1866831, overlap 1866820 1866823 TCACCGCAGCATAAG CATCAGGC TGT GCCTGATG GGCATTATGACCAGC TERM 2507 1866837 - 1866823 - G 73 -10 -2.86449 | opp_overlap 1866831, overlap 1866821 1866820 ACCGCAGCATAAGCA TCAGGC TGT GCCTGA TGGGCATTATGACCA menD 1869213 - 1867528 - | menaquinone biosynthesis protein mend [includes: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase and 2-oxoglutarate decarboxylase] menF 1870883 - 1869555 - | menaquinone-specific isochorismate synthase TERM 2508 1871744 - 1871771 + G 81 -2.9 -5.55664 | opp_overlap 1871744 CAATTTATTATGATA TCATTAATAAA AAGAAA TATATTAATGA TTTTTTTGATAATAG xaxA 1871095 - 1872306 + | toxin xaxB 1872321 - 1873328 + | toxin TERM 2509 1873348 - 1873376 + T 71 -8.3 -3.29947 | gap 1, opp_overlap 1873354, overlap 1873354 TTCACTAGCCAGACA TCATAACCCCCT TAAAAC AGGGGG-TATGA TTGGTATAGTAGATA TERM 2510 1873371 - 1873354 - T 73 -8.4 -3.50045 | opp_overlap 1873348 1873354 AGCCAGACATCATAA CCCCCT TAAAAC AGGGGG TATGATTGGTATAGT TERM 2511 1873643 - 1873665 + T 100 -15 -3.96148 | opp_overlap 1873645 TTTCCGTAGTTTGAA GAGCCTGATA AAA TATCAGGCTC TTTATCATAACAACG TERM 2512 1873663 - 1873645 - T 89 -11.8 -3.04144 | opp_overlap 1873643 TCCGTAGTTTGAAGA GCCTGATA AAA TATCAGGC TCTTTATCATAACAA nuoN 1875162 - 1873693 - | NADH-quinone oxidoreductase chain N TERM 2513 1874464 - 1874443 - G 73 -5.8 -4.56597 | opp_overlap 1874453, overlap 1874444 CGCTGTCGCTAAAAA TGCACCTG TTGGTG CTGGTGCA CCTTGGTATACATCC nuoM 1876698 - 1875169 - | NADH-quinone oxidoreductase chain M TERM 2514 1876019 - 1875984 - G 75 -9.8 -3.33737 | overlap 1876012 CATGAACGGGGACAA TTGGCATTTTTACTGC GAAT GCAGCAAAGAAGCCAA GCATCAGAATAAATT nuoL 1878553 - 1876718 - | NADH-quinone oxidoreductase chain L nuoK 1878852 - 1878550 - | NADH-quinone oxidoreductase chain K nuoJ 1879382 - 1878849 - | NADH-quinone oxidoreductase chain J TERM 2515 1879314 - 1879283 - G 73 -7.4 -4.00348 | gap 1, opp_overlap 1879301, overlap 1879286 GGCCAATTAATGAAA CAATCAGATACA-GC AGT GCGTGTACCGGATTG GTATGCGTTATTACT nuoI 1879937 - 1879395 - | NADH-quinone oxidoreductase chain I nuoH 1880929 - 1879952 - | NADH-quinone oxidoreductase chain H TERM 2516 1880553 - 1880542 - G 70 -3.6 -4.9448 | AGCCAGCAAATAAAA CGGC ATAC ACCG CTAAACCCGCTACCA nuoG 1883661 - 1880929 - | NADH-quinone oxidoreductase chain G TERM 2517 1883688 - 1883672 - R 71 -7.9 -3.5393 | overlap 1883673 AGCATGCTTCCCAAA GGCCTGC ATT GCAGGCG TTAAACCTAGAATGT TERM 2518 1883687 - 1883673 - R 86 -11.4 -2.72144 | overlap 1883672 GCATGCTTCCCAAAG GCCTGC ATT GCAGGC GTTAAACCTAGAATG nuoF 1885079 - 1883715 - | NADH-quinone oxidoreductase chain F nuoE 1885621 - 1885076 - | NADH-quinone oxidoreductase chain E nuoC 1887420 - 1885624 - | NADH-quinone oxidoreductase chain C/D nuoB 1888171 - 1887497 - | NADH-quinone oxidoreductase chain B nuoA 1888641 - 1888189 - | NADH-quinone oxidoreductase chain A TERM 2519 1888453 - 1888423 - G 93 -10.6 -4.86773 | overlap 1888445 GAAAATTACGAAAAA CATGGCAACTAAAT AGA ATTTAGCTGACATG CGCAGACGAGCGCTG TERM 2520 1888973 - 1888991 + G 78 -2.5 -5.52384 | gap 1, opp_overlap 1888977, overlap 1888977 AAAAACCTGACTCTA TATAGGCA AATG TGCCT-TA TTTTTTTGATCAAAC TERM 2521 1888977 - 1888988 + G 79 -5.8 -4.8487 | opp_overlap 1888977, overlap 1888973 ACCTGACTCTATATA GGCA AATG TGCC TTATTTTTTTGATCA PMI1763 1888751 - 1889017 + | hypothetical protein TERM 2522 1889340 - 1889308 - T 100 -10.7 -5.75599 | opp_overlap 1889308 TAAAGCATAAAAAAA CGGAAACAAATGC GTTTATA GCACCTGTTTCCG TTGATTGTGATATAT hexA 1890354 - 1889437 - | LysR-family transcriptional regulator TERM 2523 1890441 - 1890416 - H 74 -6.9 -4.25104 | TGTTTTTTATCAAAA GTCTAAATTGG ACTT CCGATTCAGAC AGTACCTTACTCTGA TERM 2524 1891228 - 1891215 - g 90 -3.1 -6.01187 | AATCAAATAAAAAAA TCAAG TAAA CTCGA CCATGTTTGTTATGA PMI1765 1891197 - 1892411 + | aminotransferase TERM 2525 1892463 - 1892428 - f 80 -9.2 -3.73445 | opp_overlap 1892433, overlap 1892433 TATTATTAATAAAGA TAAAACGCAATATCAC TGAG GTTATATTGCGTTTTT TATTTTCTTTCTGAT TERM 2526 1892433 - 1892458 + F 100 -9.1 -5.95449 | opp_overlap 1892433 1892428 TTAATAAAGATAAAA CGCAATATCAC TGAG GTTATATTGCG TTTTTTATTTTCTTT TERM 2527 1892458 - 1892433 - f 93 -9.1 -4.89838 | opp_overlap 1892433, overlap 1892428 TTAATAAAGATAAAA CGCAATATCAC TGAG GTTATATTGCG TTTTTTATTTTCTTT PMI1766 1892544 - 1893125 + | 5'-nucleotidase TERM 2528 1893136 - 1893174 + T 71 -5.5 -4.57073 | gap 2, opp_overlap 1893136 AATAAGTAGCAAAAA CGCCGTTTAG--CCGTTTA TAA TAAATGAAACTAAACGGCG TTTTTGCAAAAGATA TERM 2529 1893174 - 1893136 - T 74 -5.5 -4.83593 | gap 2, opp_overlap 1893136 AATAAGTAGCAAAAA CGCCGTTTAG--CCGTTTA TAA TAAATGAAACTAAACGGCG TTTTTGCAAAAGATA PMI1767 1895024 - 1893195 - | cation transporter PMI1768 1895796 - 1895134 - | phosphatase PMI1769 1896328 - 1895831 - | hypothetical protein TERM 2530 1896469 - 1896452 - R 71 -8.5 -2.84581 | overlap 1896451 TAACCCATGAAGAAG GTAGAAC AAAT GTTCTAC ACATCATCAAGAAAA PMI1770 1896921 - 1896466 - | hypothetical protein ackA 1897313 - 1898515 + | acetate kinase TERM 2531 1898526 - 1898552 + F 100 -13.8 -3.38046 | overlap 1898524 CTTAAGTTTTTTGAT GTACTGCCAGTG TTA TGCTGGCAGTAC TGTTTCACATAACGA pta 1898593 - 1900737 + | phosphate acetyltransferase TERM 2532 1900797 - 1900761 - f 84 -11.1 -3.10611 | opp_overlap 1900769, overlap 1900763 1900769 TTCACTTCAATAAAT TATAAAAACGCCAGT TCATATC ACTGGCGTTTTTTTA TAATGGTTGATAAAT TERM 2533 1900795 - 1900763 - f 74 -9.3 -3.10958 | opp_overlap 1900769, overlap 1900761 1900769 CACTTCAATAAATTA TAAAAACGCCAGT TCATATC ACTGGCGTTTTTT TATAATGGTTGATAA TERM 2534 1900789 - 1900769 - f 91 -8.3 -5.0809 | opp_overlap 1900769, overlap 1900763 1900761 AATAAATTATAAAAA CGCCAGT TCATATC ACTGGCG TTTTTTTATAATGGT TERM 2535 1900769 - 1900789 + F 100 -8.3 -5.67967 | opp_overlap 1900769 1900763 1900761 AATAAATTATAAAAA CGCCAGT TCATATC ACTGGCG TTTTTTTATAATGGT TERM 2536 1900859 - 1900871 + F 72 -4.9 -4.88295 | ACAAAATAACTCATT GATTT AAT AAATC TTTTTAGCTTTATTT TERM 2537 1900938 - 1900962 + F 84 -10.1 -3.53012 | opp_overlap 1900905 1900930 TAGTATACAGGCGGG TGCTTGGATCA TTT TGGTTCAAGCA TTTGCAAGGACCAAA TERM 2538 1901024 - 1900980 - f 83 -6.6 -4.81083 | gap 1, overlap 1900987 1901012 TGCAAGGACCAAAAA GACGAAAGCCCCGAATTCTAT TTAC ATAAAATTCGAGGCAGTC-TC AAGCCATCAACAACT TERM 2539 1901018 - 1900987 - f 100 -13.2 -4.14652 | overlap 1900980 1901012 ACCAAAAAGACGAAA GCCCCGAATTCTAT TTAC ATAAAATTCGAGGC AGTCTCAAGCCATCA TERM 2540 1901107 - 1901121 + F 70 -4.3 -4.89567 | TTATTGGGCTGATTA CTGTA TGTAT TACAG TTTTGTGTTTTACCC TERM 2541 1901222 - 1901245 + F 100 -15.4 -3.86524 | opp_overlap 1901220 1901219 1901217 TTGCGATAAATAGCT TTGTGGGGGA ATTT TCCCCCACAA TTTCTCACCCAATGT TERM 2542 1901400 - 1901412 + F 72 -4.9 -4.88295 | ACAAAATAACCCATT GATTT AAT AAATC TTTTTAGCTTTATTT TERM 2543 1901479 - 1901503 + F 84 -10.1 -3.53012 | opp_overlap 1901446 1901471 TAGTATACAGGCGGG TGCTTGGATCA TTT TGGTTCAAGCA TTTGCGAGGACCAAA TERM 2544 1901565 - 1901521 - f 83 -6.6 -4.77036 | gap 1, opp_overlap 1901555 1901564, overlap 1901528 1901553 TGCGAGGACCAAAAA GACGAAAGCCCCGAATTCTAT TTAC ATAAAATTCGAGGCAGTC-TC AAGTCCCAAACAACT TERM 2545 1901559 - 1901528 - f 100 -13.2 -4.14652 | opp_overlap 1901555, overlap 1901521 1901553 ACCAAAAAGACGAAA GCCCCGAATTCTAT TTAC ATAAAATTCGAGGC AGTCTCAAGTCCCAA TERM 2546 1901648 - 1901662 + F 70 -4.3 -4.89567 | TTATTGGGCTGATTA CTGTA TGTAT TACAG TTTTGTGTTTTACCC TERM 2547 1901763 - 1901786 + F 100 -15.4 -3.85817 | opp_overlap 1901761 1901760 1901758 TTGCGATAAATAGCT TTGTGGGGGA ATTT TCCCCCACAA TTTCTCGCCCAACGT TERM 2548 1901941 - 1901953 + F 72 -4.9 -4.88295 | ACAAAGTAACCTGTT GATTT AAT AAATC TTTTTAGCTTTATTT TERM 2549 1902020 - 1902044 + F 84 -10.1 -3.53012 | opp_overlap 1901987 1902012 TAGTATACAGGCGGG TGCTTGGATCA TTT TGGTTCAAGCA TTTGCAAGGACCAAA TERM 2550 1902106 - 1902062 - f 83 -6.6 -4.81083 | gap 1, opp_overlap 1902096 1902105, overlap 1902069 1902094 TGCAAGGACCAAAAA GACGAAAGCCCCGAATTCTAT TTAC ATAAAATTCGAGGCAGTC-TC AAGTCCAGACAACTT TERM 2551 1902100 - 1902069 - f 100 -13.2 -4.14652 | opp_overlap 1902096, overlap 1902062 1902094 ACCAAAAAGACGAAA GCCCCGAATTCTAT TTAC ATAAAATTCGAGGC AGTCTCAAGTCCAGA TERM 2552 1902188 - 1902202 + F 70 -4.3 -4.91977 | TTATTGGGCTGATTA CTGTA TGTAT TACAG TTTTGTGTTTTACTC TERM 2553 1902303 - 1902326 + F 100 -15.4 -3.86194 | opp_overlap 1902301 1902300 1902298 TTGCGATAAATAGCT TTGTGGGGGA ATTT TCCCCCACAA TTTCTCGCCAACGTT TERM 2554 1904140 - 1904124 - g 77 -8.7 -3.89695 | GGTCCACAAACACAA GGTGAGC ATT ACTCACC CACTCAGCCTTTTTC TERM 2555 1904554 - 1904544 - g 73 -8.2 -3.91716 | opp_overlap 1904543 1904541 TTACCTTGTAAACAA CCCC CTT GGGG ACTTGTTGCTGGTGT gcd 1902531 - 1904930 + | quinoprotein glucose dehydrogenase TERM 2556 1904953 - 1904975 + T 100 -9.2 -5.39905 | opp_overlap 1904953 1904950 TTATCAATAATATCA GGCGATTG TTATTTT CAATCGCC TTTTTATTATTTGCT TERM 2557 1904975 - 1904953 - T 73 -9.2 -2.87003 | opp_overlap 1904953, overlap 1904950 TTATCAATAATATCA GGCGATTG TTATTTT CAATCGCC TTTTTATTATTTGCT PMI1774 1906231 - 1905008 - | alanine racemase TERM 2558 1906444 - 1906419 - R 100 -10.5 -5.52384 | opp_overlap 1906419 TTTCTACCAAAAAAA TGCCCGACT GGTTAAAA AGTCGGGCA TTTATTAAAATTCCA TERM 2559 1906419 - 1906444 + r 95 -10.5 -4.20918 | opp_overlap 1906419 TTTCTACCAAAAAAA TGCCCGACT GGTTAAAA AGTCGGGCA TTTATTAAAATTCCA PMI1775 1907744 - 1906488 - | PTS system EIIC component TERM 2560 1906713 - 1906699 - G 77 -6.4 -4.55295 | GCCCCCACAAAGAAA TGAGGT ACC ACCCCA GGTATAATGACAGTC TERM 2561 1907638 - 1907648 + g 76 -3.2 -5.24531 | GTGCCCTTAATACAT TCTG TCG CAGG TTTTTTCTGAGCAAT PMI1776 1908042 - 1907755 - | PTS system EIIB component PMI1777 1908515 - 1908072 - | PTS system EIIA component PMI1778 1908742 - 1909788 + | LacI-family transcriptional regulator PMI1779 1910327 - 1909785 - | NUDIX hydrolase TERM 2562 1910073 - 1910088 + g 76 -7.6 -4.24726 | TTCTGCTTCACGACG TGCACT TTCG AGTGCA TTTTCACCTTGTTGT TERM 2563 1910245 - 1910271 + g 86 -4.5 -5.52384 | gap 1 TCTGCTCGCATTTGT TGACG-TGTTGC TTGT GCAACAACTTCA TTTTTTTCATCAACA PMI1780 1910523 - 1911137 + | glutathione-S transferase PMI1781 1911202 - 1912107 + | cell division inhibitor, NAD(P)-binding ubiX 1912708 - 1912127 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2564 1912803 - 1912766 - R 100 -14.3 -5.055 | gap 1, opp_overlap 1912769 TTAACCCTCAAAAAA CAAGCGCCGATG-TAGTG TTA CGCTAGCATCGACGCTTG ATAAAGGTGGCTATT TERM 2565 1912769 - 1912800 + r 81 -10.2 -3.15663 | gap 1, opp_overlap 1912766 ACCCTCAAAAAACAA GCGCCGATG-TAGTG TTA CGCTAGCATCGACGC TTGATAAAGGTGGCT purF 1914347 - 1912830 - | amidophosphoribosyltransferase cvpA 1914869 - 1914378 - | colicin V production protein TERM 2566 1914544 - 1914521 - G 72 -3.2 -5.10767 | gap 1, overlap 1914525 1914526 CACCCAAGACAAAAA GTAACGCTGAT ACA ATCAGCA-CAC CTCTTAAAGCCCCGA TERM 2567 1914541 - 1914525 - G 71 -7.3 -3.93691 | overlap 1914521 1914526 CAAGACAAAAAGTAA CGCTGAT ACA ATCAGCA CACCTCTTAAAGCCC TERM 2568 1915003 - 1914971 - R 72 -8.6 -3.12437 | gap 1, opp_overlap 1914971, overlap 1914970 TAATTTTAAAATAAT TTACGGCGA-CATGA AAAA TCATAATCGCCGCAA TAAGTTAACACCTTG dedD 1915690 - 1915052 - | hypothetical protein TERM 2569 1915495 - 1915462 - G 77 -11.1 -2.87564 | gap 1, opp_overlap 1915493 TTACCGCTTCAGAGA TCATCGCC-TCAGAAG CAC CCTCTGATGGCGTTGA CGGTGTCGTGGTTTG folC 1916978 - 1915680 - | FolC bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] TERM 2570 1916951 - 1916927 - G 95 -12.1 -4.46073 | opp_overlap 1916931 GTTCAAGATAAGAAA GCCACACCGAC AAA GGCGATGTGGC TTGAGGAGCAGTTAT accD 1917933 - 1916971 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit beta dedA 1918931 - 1918230 - | hypothetical protein TERM 2571 1918465 - 1918441 - G 85 -7.2 -4.98436 | overlap 1918460 GTAACATTATAAAAA GCAAAATGAC GATAT GACATTTTGC CCATTCCTGCAACGA truA 1919816 - 1918971 - | tRNA pseudouridine synthase A usg 1920850 - 1919840 - | aspartate-semialdehyde dehydrogenase pdxB 1922022 - 1920895 - | erythronate-4-phosphate dehydrogenase PMI1793 1922956 - 1922171 - | transcriptional regulator TERM 2572 1922338 - 1922325 - G 79 -5.3 -5.11613 | ATAGCATGTAAAAAA CGTAA TCGC TTACG CCATTCACTAAAAGA TERM 2573 1922698 - 1922712 + g 100 -4.3 -5.88565 | GTGCAATATCTAGCA CCTTA AAAGA TAAGG TTTTTTTATTGTAAC PMI1794 1923078 - 1923998 + | hypothetical protein TERM 2574 1923987 - 1923975 - T 79 -3.3 -5.60993 | TCTGTCACAAAAAAA GCAGA TTG TCAGC AGGAGATGTGAGTCA TERM 2575 1924053 - 1924030 - T 100 -9.6 -6.02919 | opp_overlap 1924029 1924030 1924032, overlap 1924032 CTATAAATAAAAAAA TACCGGCTAA GCAA TTAGCCGGTC ACTTTGCTCCCCTAG TERM 2576 1924051 - 1924032 - T 100 -12.2 -4.6372 | opp_overlap 1924030 1924029 1924032, overlap 1924030 ATAAATAAAAAAATA CCGGCTAA GCAA TTAGCCGG TCACTTTGCTCCCCT TERM 2577 1924032 - 1924051 + T 89 -12.2 -2.67981 | opp_overlap 1924032 1924030, overlap 1924030 1924029 ATAAATAAAAAAATA CCGGCTAA GCAA TTAGCCGG TCACTTTGCTCCCCT TERM 2578 1924529 - 1924505 - T 100 -10.1 -6.07374 | opp_overlap 1924504 1924505 ACAAAAAATAAAAAA GCAGTCACTTA TTA TAAGCAACTGC CTTTATCATTTATAC fabB 1925778 - 1924567 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 2579 1925709 - 1925725 + g 70 -8 -3.63991 | opp_overlap 1925708 CTTCTTTTAAAGAGT CCAGCA CTTCT TGCTGG TTATTACCAATGCTC TERM 2580 1926550 - 1926537 - g 74 -4.5 -4.90266 | overlap 1926538 TGCACCAAGTAAAAA CCCAC AAAT GTGGA GTGAAACATTATTTC TERM 2581 1926607 - 1926594 - g 71 -6.7 -4.09685 | opp_overlap 1926593 CTCGATGCGTGAAAA TGGCA CTTT TGCCA CCTTTACCGCAGCTG TERM 2582 1927438 - 1927423 - g 71 -4 -4.85433 | gap 1 ATACAAAGTGAAAAA CTGC-CT ATC AGTGCAG TAAGGGGTCAAGTTA PMI1796 1925983 - 1928022 + | FAD-dependent oxidoreductase TERM 2583 1928046 - 1928085 + T 93 -11.2 -4.1043 | gap 1 ACTGAAATTACGGTT GATATTTAAGTAA-CTATT GTT AATGGGTTACTTAAATATC TTTATAGTATTTAAA PMI1797 1928658 - 1928110 - | acetyltransferase TERM 2584 1928719 - 1928736 + r 74 -5.5 -4.93318 | opp_overlap 1928720, overlap 1928720 ATTACCTATAAAAAA ACCATCC ATAA GGATGGC TTTTTATCCGTTCTA TERM 2585 1928735 - 1928720 - R 100 -9 -5.64274 | opp_overlap 1928719 1928720 TTACCTATAAAAAAA CCATCC ATAA GGATGG CTTTTTATCCGTTCT TERM 2586 1928720 - 1928735 + r 78 -9 -3.54906 | opp_overlap 1928720, overlap 1928719 TTACCTATAAAAAAA CCATCC ATAA GGATGG CTTTTTATCCGTTCT PMI1798 1929656 - 1928760 - | lipoprotein TERM 2587 1929937 - 1929955 + r 91 -11.8 -3.40071 | opp_overlap 1929937, overlap 1929940 GCAATCAAAGAAAAA CAACCGAT AGT ATCGGTTG TTCTCAATATAGGTT TERM 2588 1929955 - 1929937 - R 100 -11.8 -5.38326 | opp_overlap 1929937 1929940 GCAATCAAAGAAAAA CAACCGAT AGT ATCGGTTG TTCTCAATATAGGTT TERM 2589 1929940 - 1929952 + r 74 -7.7 -3.83568 | opp_overlap 1929937, overlap 1929937 ATCAAAGAAAAACAA CCGAT AGT ATCGG TTGTTCTCAATATAG PMI1799 1930250 - 1929978 - | hypothetical protein PMI1800 1930941 - 1930387 - | hypothetical protein PMI1801 1931758 - 1930958 - | hypothetical protein TERM 2590 1931296 - 1931280 - G 93 -8.7 -5.22039 | CCTAAAGCGAAAAAA GATCCTG TTC CAGGACC AAAAACACCATCATA TERM 2591 1931431 - 1931443 + g 70 -5.5 -4.3534 | opp_overlap 1931431 TTGCGATAGTAAGAA CAGGC AGC GCTTG TTTTAGTAATTCAGG aroC 1933016 - 1931931 - | chorismate synthase PMI1803 1934037 - 1933105 - | methylase PMI1804 1934432 - 1934986 + | ferritin-like protein TERM 2592 1935018 - 1935036 + F 100 -11.7 -5.69793 | CTATGTGACTATTTT GGCAGGG ATCCC CCCTGCC TTTTTTGTTTCATCT TERM 2593 1935050 - 1935063 + F 77 -3.9 -5.37043 | CCTTTTTTGTTTCAT CTATT TAAC AATAG TTTTTTATCTCCCCT PMI1805 1935139 - 1935681 + | hypothetical protein sixA 1936209 - 1935724 - | phosphohistidine phosphatase TERM 2594 1936589 - 1936602 + r 78 -9.5 -3.26874 | opp_overlap 1936589 ATAGGTACAAAAAAA GGCGC ATAA GCGCC TTAATCATCCTTTCT TERM 2595 1936602 - 1936589 - R 100 -9.5 -5.65177 | opp_overlap 1936589 ATAGGTACAAAAAAA GGCGC ATAA GCGCC TTAATCATCCTTTCT fadJ 1938811 - 1936643 - | fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] TERM 2596 1937323 - 1937341 + g 71 -3.9 -5.00616 | gap 1, opp_overlap 1937326 1937327, overlap 1937327 1937337 1937337 GTTTATCTCCTACCA CAATGGCA ACTT TGCC-TTG TTTTTTAGCAAAAGC TERM 2597 1937327 - 1937338 + g 73 -5.8 -4.61482 | opp_overlap 1937327 1937326, overlap 1937323 1937337 1937337 ATCTCCTACCACAAT GGCA ACTT TGCC TTGTTTTTTAGCAAA TERM 2598 1937778 - 1937788 + g 75 -5.4 -4.75472 | TCTTTAATTCTAACG GGTA AAT TACC TTTTGTTGCTGTCAC fadI 1940115 - 1938811 - | 3-ketoacyl-CoA thiolase TERM 2599 1940327 - 1940307 - R 100 -10.5 -6.07374 | ATAAAAAATAAAAAA GGCTACTGA ATT TCAATAGCC TTGAAGAAGTTTAAT TERM 2600 1940363 - 1940349 - R 70 -7.2 -3.66921 | opp_overlap 1940349 AAGTTTAATTTCAAA GGATTA ACG TAATCC TAATTGGAAGATCAG PMI1809 1940648 - 1940352 - | hypothetical protein TERM 2601 1940717 - 1940706 - H 77 -3 -5.57888 | AGCAAAAAAATAAAA TAAC CTGC GTTA GCTCAAATTAACCTA fadL 1940994 - 1942355 + | long-chain fatty acid transport protein TERM 2602 1942410 - 1942375 - T 86 -10 -3.60098 | opp_overlap 1942384, overlap 1942384 ATTTGCTACTTTAAA TACAAAAAATGGTCTT AAAA AAGACCATTTTTTATT TAAACAACCAGATAA TERM 2603 1942384 - 1942401 + T 100 -8.5 -5.63517 | opp_overlap 1942384 1942375 TTTAAATACAAAAAA TGGTCTT AAAA AAGACCA TTTTTTATTTAAACA TERM 2604 1942401 - 1942384 - T 100 -8.5 -5.56264 | opp_overlap 1942384, overlap 1942375 TTTAAATACAAAAAA TGGTCTT AAAA AAGACCA TTTTTTATTTAAACA vacJ 1943174 - 1942431 - | VacJ lipoprotein TERM 2605 1944927 - 1944912 - g 88 -9 -4.65895 | CTGTTGACGGAAAAA CGGCTT TTAT AAGCCG AGCAACACCTAAAAC PMI1812 1944497 - 1945192 + | fimbrial adapter TERM 2606 1945239 - 1945225 - f 74 -8.6 -3.29471 | opp_overlap 1945223 CTCTCACTATATTAA CAAGCT ATT AGCTTG TATACATTAAACGGG TERM 2607 1945568 - 1945538 - f 74 -9.8 -2.66272 | opp_overlap 1945546, overlap 1945543 1945546 CCTTAGTTAAATGGA TATAACGAGCCCCT CCT AAGGGCTAGTTACA GGTTCGATTCCTGTA TERM 2608 1945563 - 1945543 - f 73 -7.5 -3.57797 | opp_overlap 1945546, overlap 1945538 1945546 GTTAAATGGATATAA CGAGCCCCT CCT AAGGGCTAG TTACAGGTTCGATTC PMI1813 1945822 - 1946625 + | hypothetical protein TERM 2609 1948213 - 1948227 + G 70 -5.8 -4.37658 | opp_overlap 1948213 1948208 TATGGTAAAAGAAAA TCTTTA TGA TAAAGA TTTTATAGAAAAATT TERM 2610 1948227 - 1948213 - g 81 -5.8 -5.09259 | opp_overlap 1948213, overlap 1948208 TATGGTAAAAGAAAA TCTTTA TGA TAAAGA TTTTATAGAAAAATT TERM 2611 1948700 - 1948723 + G 72 -8.3 -3.54543 | opp_overlap 1948692, overlap 1948692 TACCAAACCAAAGCT TGGATTATG TCACGC CATAATCCA TTTCAAACAGTAAGT phsA 1947407 - 1949686 + | thiosulfate reductase precursor TERM 2612 1950365 - 1950392 + G 73 -2.1 -5.1925 | gap 1 GTTTGATCATTGTCG CCATGATAGC CATATTGGT GCTA-CATGG TTTTTTACGTTATGC phsC 1950280 - 1951047 + | thiosulfate reductase cytochrome b subunit TERM 2613 1951080 - 1951100 + T 100 -11.9 -4.75308 | TTATTAATATCCCCA TGCCTGCTT ACC GAGCAGGCA TTTTTACGTATTGGT TERM 2614 1951251 - 1951263 + T 82 -4.9 -5.44119 | TTTATGATGATATTC TACTA AAT TAGTA TTTTTTTGAACTAGC TERM 2615 1951289 - 1951299 + T 72 -2.6 -5.47431 | CTAGCTAGTTTTTAT TTTT ACT AAAA TTTTTTATATATTAA TERM 2616 1951332 - 1951346 + T 71 -2.9 -5.1861 | opp_overlap 1951332 AATATAATTAACCAA TCTTT TATAT AAAGA TTTTTTAGTCATAAA TERM 2617 1951462 - 1951486 + T 70 -7.2 -3.75153 | opp_overlap 1951467, overlap 1951467 TTACTGTTAAAAAAT AAAAATGCCC ATTAA GGGCATTTTA TTTAGATTCAAGGCG TERM 2618 1951481 - 1951467 - T 100 -7.1 -5.75538 | opp_overlap 1951467 1951462 GTTAAAAAATAAAAA TGCCC ATTAA GGGCA TTTTATTTAGATTCA TERM 2619 1951467 - 1951481 + T 88 -7.1 -4.94058 | opp_overlap 1951467, overlap 1951462 GTTAAAAAATAAAAA TGCCC ATTAA GGGCA TTTTATTTAGATTCA PMI1817 1951920 - 1951618 - | transcriptional regulator TERM 2620 1952429 - 1952412 - H 91 -7.1 -5.252 | opp_overlap 1952411 1952414 CATTTTTACAAAAAA TATTGAG CAAT CTCAATA AATTCTAATTAATAC TERM 2621 1952785 - 1952767 - H 71 -9 -2.53015 | opp_overlap 1952767, overlap 1952779 ACATTTCTTAATTTA TAGAACAT CTA ATGTTCTA CTAAAAACATGCCAG TERM 2622 1953350 - 1953362 + H 76 -3.5 -5.45802 | opp_overlap 1953350 GTTTACTGTAAAGGA TAATT TTG AATTA TTTTTATTTTAACCC TERM 2623 1955741 - 1955731 - g 76 -6.8 -4.43815 | ATCAATATATTAAAA GCAC TTG GTGC TCCAGTACCTGAATA TERM 2624 1955891 - 1955913 + G 72 -8.4 -3.61178 | TAGTACGTTTAGGTT GGTCTCATGG CGA CCAAGAGATC TTTAGCATCGATGAA gltX 1955083 - 1956501 + | glutamyl-tRNA synthetase TERM 2625 1956531 - 1956560 + T 100 -11.5 -5.86465 | opp_overlap 1956531 TTATTTCACAACGAA GAGTCGTCACTTA TTTT TAAGCGGCGACTC TTTTTTTGTATTCTT TERM 2626 1956560 - 1956531 - T 90 -11.5 -3.45118 | opp_overlap 1956531 TTATTTCACAACGAA GAGTCGTCACTTA TTTT TAAGCGGCGACTC TTTTTTTGTATTCTT TERM 2627 1956849 - 1956870 + T 100 -11.7 -5.79595 | opp_overlap 1956841 1956849 ACCAGAATCTTAAGA TCCTGAAGA GAAA TCTTCAGGA TTTTTTATTTTCACC TERM 2628 1956870 - 1956849 - T 89 -11.7 -3.11559 | opp_overlap 1956849, overlap 1956841 ACCAGAATCTTAAGA TCCTGAAGA GAAA TCTTCAGGA TTTTTTATTTTCACC PMI1819 1957684 - 1956932 - | short-chain dehydrogenase PMI1820 1957841 - 1958281 + | MarR-family transcriptional regulator PMI1821 1958499 - 1958278 - | hypothetical protein TERM 2629 1958559 - 1958586 + r 74 -7 -4.22009 | opp_overlap 1958563, overlap 1958563 TAATTTAACGATAAA AAAAGCAGTACC GACG GGTACTGCTTGA TTTATGTTACATGAT TERM 2630 1958582 - 1958563 - R 100 -12.2 -5.71983 | opp_overlap 1958563 1958559 TTAACGATAAAAAAA GCAGTACC GACG GGTACTGC TTGATTTATGTTACA TERM 2631 1958563 - 1958582 + r 95 -12.2 -3.69341 | opp_overlap 1958563, overlap 1958559 TTAACGATAAAAAAA GCAGTACC GACG GGTACTGC TTGATTTATGTTACA nupC 1959847 - 1958663 - | nucleoside permease TERM 2632 1960057 - 1960027 - R 100 -14.2 -4.07246 | opp_overlap 1960023 1960018 1960027 TTAGCTTAAATTAAA GATGCTACTGAGAA CTG CTCTCAATAGCATC TAAGTTTATTGTAAA TERM 2633 1960027 - 1960057 + r 86 -11.3 -2.78523 | opp_overlap 1960027, overlap 1960023 1960018 TTAGCTTAAATTAAA GATGCTACTGAGA ACTGC TCTCAATAGCATC TAAGTTTATTGTAAA ligA 1962103 - 1960076 - | DNA ligase TERM 2634 1962144 - 1962127 - R 100 -14.1 -5.20222 | opp_overlap 1962123 ACCAAAGAAAGAAAA GCCCCCG CAAG CGGGGGC TGAGGTTGTTGGCAA zipA 1963333 - 1962278 - | cell division protein TERM 2635 1963783 - 1963802 + G 78 -2.8 -5.50723 | overlap 1963766 1963786 GTGGTTAAGCTATGT TATCTGGC CACT GTCAGTTA TTTTTATTTTGCTGG TERM 2636 1963786 - 1963799 + G 72 -4.5 -4.80077 | overlap 1963766 1963783 GTTAAGCTATGTTAT CTGGC CACT GTCAG TTATTTTTATTTTGC cysZ 1963556 - 1964326 + | sulfate transporter TERM 2637 1964317 - 1964335 + F 100 -13.2 -4.04295 | opp_overlap 1964315 1964312 ACATGTACAAGCAGG CCAGTGGT AAT ACCACTGG TTTCATTGTGATTAG cysK 1964475 - 1965428 + | cysteine synthase A TERM 2638 1965466 - 1965480 + F 100 -7.8 -5.67063 | opp_overlap 1965466 ATTTTTATTAAAAAA GCACCT TCA GGGTGC TTTTTTTGTGGTAGA TERM 2639 1965480 - 1965466 - f 91 -7.1 -5.14965 | opp_overlap 1965466 ATTTTTATTAAAAAA GCACC TTCAG GGTGC TTTTTTTGTGGTAGA hpr 1965759 - 1966016 + | PTS system phosphocarrier protein TERM 2640 1966052 - 1966076 + F 87 -10.1 -3.92869 | opp_overlap 1966044 CATTAACGTCCTATT TTCCCCTGA AAATCGC TCAGGGGAA TTTATAACTCGATGA TERM 2641 1966469 - 1966455 - g 81 -7 -4.81863 | opp_overlap 1966455 AAAGTGACAAGAAAA CCGCAG AAG CAGCGG TTCAATCTGTTATTG TERM 2642 1966941 - 1966915 - g 84 -10.2 -3.8493 | overlap 1966913 ACATGAAAAAGAAGA GCTGGCAAAACT AAA AGATTTACCAGC AATTACCCTTGATGG TERM 2643 1967832 - 1967798 - g 77 -7.9 -4.21194 | gap 1 TTTGATGATGCAAAA GCACT-GGCAGAGCAA GCAC TTGCTCAGCCGACTGC AAAGGAATTAATGGA ptsI 1966160 - 1967887 + | phosphoenolpyruvate-protein phosphotransferase TERM 2644 1967902 - 1967877 - f 75 -2.6 -5.68438 | gap 1, overlap 1967879 TTACTAAAGAAAAAA CACTGTGCTAA TAACG TTAGC-CAGAG CCCGGTCCCAACTAA crr 1967937 - 1968446 + | PTS family enzyme IIA component TERM 2645 1968472 - 1968494 + T 100 -10.6 -4.96848 | opp_overlap 1968472 GTTCTCACTTTTAAA CCGCCACA TTTCCTC TGTGGCGG TTTTTATATGCAAGC TERM 2646 1968494 - 1968472 - T 87 -10.6 -3.57144 | opp_overlap 1968472 GTTCTCACTTTTAAA CCGCCACA TTTCCTC TGTGGCGG TTTTTATATGCAAGC cysM 1969418 - 1968537 - | cysteine synthase B TERM 2647 1969589 - 1969562 - R 100 -11.4 -4.28656 | opp_overlap 1969579, overlap 1969564 1969578 1969579 ACTCAATAGCCAAAA TACCCATGCAAA AAAA TCTGCATGGGCA GTCATTAACTGTAAT TERM 2648 1969587 - 1969564 - R 95 -11.8 -3.741 | opp_overlap 1969579, overlap 1969562 1969578 1969579 TCAATAGCCAAAATA CCCATGCAAA AAAA TCTGCATGGG CAGTCATTAACTGTA TERM 2649 1969591 - 1969578 - R 71 -2.3 -5.47821 | opp_overlap 1969579, overlap 1969564 1969562 1969579 ACCCATGCAAAAAAA TCTGC ATGG GCAGT CATTAACTGTAATAA cysA 1970716 - 1969628 - | sulfate/thiosulfate ABC transporter, ATP-binding protein cysW 1971578 - 1970736 - | sulfate/thiosulfate ABC transporter, permease protein TERM 2650 1970806 - 1970792 - G 73 -8.6 -3.74526 | CCATTAATGTAATAA TTGCCA TCA TGGCAA GTAATGCTGCTGCCG cysT 1972411 - 1971578 - | sulfate/thiosulfate ABC transporter, permease protein cysP 1973442 - 1972411 - | sulfate/thiosulfate ABC transporter, thiosulfate-binding protein TERM 2651 1973665 - 1973640 - R 93 -6.9 -5.45802 | TCGTCAAAATAAAAA CGCCAGCAT AGTAAATG ATACTGGCG TGGCAAAATAGTAGT PMI1836 1974590 - 1973694 - | hypothetical protein TERM 2652 1974382 - 1974392 + g 70 -2.6 -5.0133 | TCTGGCGCACTATTG TTAT CTG ATAA TTTTTTCCAAAGATC PMI1837 1975329 - 1974739 - | lipoprotein TERM 2653 1975309 - 1975292 - G 73 -9.9 -3.18768 | opp_overlap 1975285, overlap 1975290 1975288 CTTAATAGCAAGACA CTTGTGC TTAA GCACAAG GGTAACCAAAATTTA TERM 2654 1975425 - 1975413 - R 74 -6.3 -4.44748 | ATAAAACTAAAATAA CTGAA TAC TTCAG ACTAGTTACGACCAT TERM 2655 1975611 - 1975563 - R 85 -5 -5.61277 | TACAAAAAAAGAAAA TCCTC-TCTATTAACCGATTAAAA TTA TCTTAA-CAGTCAATAAAAGAGGA TTTAGCGAAGAATTA PMI1838 1976061 - 1975624 - | GNAT-family acetyltransferase hemF 1976195 - 1977103 + | Coproporphyrinogen III oxidase, aerobic TERM 2656 1977156 - 1977124 - T 100 -10.8 -4.28548 | opp_overlap 1977124 1977129 ACTGACGCATTAAAA CTAAAGCCATTTAT TTATT ATAATTGGCTTTAG TTTGGTAAAAATTAC TERM 2657 1977124 - 1977156 + T 89 -10.8 -3.74747 | opp_overlap 1977124, overlap 1977129 ACTGACGCATTAAAA CTAAAGCCATTTAT TTATT ATAATTGGCTTTAG TTTGGTAAAAATTAC PMI1840 1977551 - 1977183 - | lipoprotein TERM 2658 1977582 - 1977598 + r 76 -5.2 -5.00884 | opp_overlap 1977577 1977582, overlap 1977592 AATACGAATAGTAAT CAGTTA CAATT TAACTG TTTTTTGAAAAAAAT TERM 2659 1977688 - 1977711 + r 77 -4.6 -5.21236 | gap 1, opp_overlap 1977688 TAATTAATAAAAAAA CTGAGTCCAGT GAA AC-GAACTCAG TTTTTATTCTACATT TERM 2660 1977711 - 1977688 - R 100 -6.8 -5.87996 | gap 1, opp_overlap 1977688 TAATTAATAAAAAAA CTGAGTCCAGT GAA AC-GAACTCAG TTTTTATTCTACATT engA 1979233 - 1977743 - | GTP-binding protein TERM 2661 1979324 - 1979305 - R 100 -13.6 -4.14652 | opp_overlap 1979298, overlap 1979298 ACTAAAAAGACGAAA CGGCTCCT TTAA AGGAGCCG TAAAATAATTATATT PMI1842 1980525 - 1979353 - | lipoprotein PMI1843 1981160 - 1980540 - | hypothetical protein TERM 2662 1980830 - 1980842 + g 70 -7.7 -3.67564 | ATATTGCTTTAGTCA GGTGA GTT TCACC TTTGGCTAAATCGTT hisS 1982454 - 1981171 - | histidyl-tRNA synthetase TERM 2663 1982567 - 1982540 - R 71 -7.8 -3.44334 | opp_overlap 1982542, overlap 1982542 TGAAATCAATAGTAA TACAGACTCATT AGTT AATGAGCCTGTT AATTGCGTGTTATTT TERM 2664 1982542 - 1982565 + r 73 -8.2 -3.41002 | opp_overlap 1982540 1982542 AAATCAATAGTAATA CAGACTCATT AGTT AATGAGCCTG TTAATTGCGTGTTAT TERM 2665 1982565 - 1982542 - R 83 -10.4 -3.28205 | opp_overlap 1982542, overlap 1982540 AAATCAATAGTAATA CAGACTCATT AGTT AATGAGCCTG TTAATTGCGTGTTAT ispG 1983698 - 1982577 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PMI1846 1984708 - 1983746 - | DNA-binding protein PMI1847 1985215 - 1984781 - | lipoprotein PMI1848 1986482 - 1985301 - | radical SAM superfamily protein TERM 2666 1986387 - 1986403 + g 84 -2.3 -5.77571 | CATCTGTTTACGATT TAAATCT AAC AGATTGA TTTTTGTTTTTTGAT TERM 2667 1986587 - 1986559 - R 100 -14.7 -5.20534 | opp_overlap 1986557 ATTAATTAATAAAAA GACGCCCCATTAA AGA TTAACAGGGCGTC GCATTGTACATTTTT ndk 1987049 - 1986624 - | nucleoside diphosphate kinase pbpC 1989606 - 1987285 - | penicillin-binding protein 1C TERM 2668 1988870 - 1988884 + g 72 -8.6 -3.45242 | overlap 1988868 1988870 GGCGTTTGTCTTGGT GCAAGT AGC ACTTGC TCTTGCTTTATTTCA TERM 2669 1988870 - 1988890 + g 74 -6.2 -4.41616 | gap 1, overlap 1988870 1988868 GGCGTTTGTCTTGGT GCAAGTAGC ACTT GCT-CTTGC TTTATTTCAGCCACT TERM 2670 1989038 - 1989063 + g 79 -9.7 -3.6682 | GCCATTAATGTTGCT TCACCTGCTGA TAAA TCAGCGGGAGA TTTACCTAAATAGGC TERM 2671 1989504 - 1989523 + g 89 -12.2 -3.57918 | CGATTTGAGGCTCGG GATCTGGC AGTG GCCAGATC TTATCTGCTATCCAT TERM 2672 1989627 - 1989646 + r 90 -12.2 -2.94912 | opp_overlap 1989620 1989627 CACTCAAAGGAAAAA GCCCTTTC CGAA GAAAGGGC TGTCTAGCTTAAGGC TERM 2673 1989646 - 1989627 - R 100 -12.2 -5.00138 | opp_overlap 1989627, overlap 1989620 CACTCAAAGGAAAAA GCCCTTTC CGAA GAAAGGGC TGTCTAGCTTAAGGC PMI1851 1994745 - 1989655 - | alpha-2-macroglobulin-like lipoprotein (endopeptidase inhibitor) TERM 2674 1993031 - 1993044 + g 71 -6.7 -4.07885 | opp_overlap 1993013, overlap 1993013 GGCAGTTGACTGACG GCTTC TCGC GAAGC TTTTAAGAAAACCTG TERM 2675 1994986 - 1994965 - R 100 -11.7 -5.79526 | ATAGGGTAAAAAAAA GCGATATCT GATG AGATATCGC CTAAACTGCAAAAAA PMI1852 1995432 - 1995007 - | hypothetical protein pepB 1996755 - 1995460 - | peptidase B TERM 2676 1997012 - 1996994 - R 100 -6.7 -5.74684 | opp_overlap 1996994 CAATAAAAACAAAAA GACTGGC AATTA ACCAGTC TTTCGCATTAATCAT PMI1854 1997230 - 1997036 - | hypothetical protein fdx 1997581 - 1997246 - | 2Fe-2S ferredoxin hscA 1999434 - 1997584 - | chaperone protein HscA hscB 1999967 - 1999446 - | co-chaperone protein HscB iscA 2000339 - 2000016 - | iron-binding protein (iron-sulfur cluster assembly protein) TERM 2677 2000398 - 2000367 - R 90 -9.5 -4.18044 | TCATAAAGAACGAAA GCGGACACTGAAA CATAAC CTTCAGCATCCGC CAATATTTTATTTTT iscU 2000816 - 2000430 - | iron-binding protein iscS 2002055 - 2000841 - | cysteine desulfurase iscR 2002617 - 2002123 - | iron-sulfur cluster transcriptional regulator PMI1862 2003475 - 2002747 - | hypothetical tRNA/rRNA methyltransferase suhB 2003600 - 2004403 + | inositol-1-monophosphatase TERM 2678 2004499 - 2004462 - T 100 -11.3 -4.41206 | opp_overlap 2004463, overlap 2004463 2004466 AACTATCTTATAAAA TGATCCCCAGTAGTTGG ACAG CCAATTACTGGGGGTCT TTTTTATTGCCTATG TERM 2679 2004498 - 2004463 - T 100 -14.8 -3.24 | opp_overlap 2004463, overlap 2004462 2004466 ACTATCTTATAAAAT GATCCCCAGTAGTTGG ACAG CCAATTACTGGGGGTC TTTTTTATTGCCTAT TERM 2680 2004463 - 2004498 + T 100 -19.2 -5.49234 | opp_overlap 2004462 2004463 2004466 ACTATCTTATAAAAT GATCCCCAGTAGTTGG ACAG CCAATTACTGGGGGTC TTTTTTATTGCCTAT TERM 2681 2004495 - 2004466 - T 100 -15.1 -2.50345 | opp_overlap 2004463, overlap 2004463 2004462 ATCTTATAAAATGAT CCCCAGTAGTTGG ACAG CCAATTACTGGGG GTCTTTTTTATTGCC PMI1864 2005184 - 2004510 - | TetR-family transcriptional regulator PMI1865 2006478 - 2005210 - | peptidase TERM 2682 2006491 - 2006518 + r 72 -7.2 -3.88823 | CATAGTAATACCTTT TTTTATTCATTC ATTT GAATGAATTAAA TTTAGCTTTAATATT TERM 2683 2006619 - 2006594 - R 100 -9.1 -6.23317 | ATAAAAAGAAAAAAA CCTGTAATATC AAAA GGTATTACAGG CTTAGACGTTTATGA hcaT 2007808 - 2006654 - | probable 3-phenylpropionic acid transporter (MFS-family transporter) TERM 2684 2007531 - 2007521 - G 72 -4.6 -4.77036 | GGTCATTACCAAAAA GAGC CAA GCCC AATGAGTGCCCAACA TERM 2685 2007590 - 2007579 - G 76 -2.2 -5.43414 | AGGAGAGATAAAAAA GCAA AAAG TCGC AGTGCAGTAATGAGC TERM 2686 2007866 - 2007839 - R 79 -3.5 -5.52909 | gap 2, opp_overlap 2007856 TAACATGCAAAAAAA CCCGC--CAAGAA CATG TTCTCGAAGCGGG CTTGTATAACGGGTT glyA 2009154 - 2007901 - | serine hydroxymethyltransferase TERM 2687 2008223 - 2008201 - G 72 -3.2 -5.10208 | overlap 2008203 TAAGTCTAATAAAAA CAGGTGGTTC TCT GTGCCACCAG ATACTACTTTATAAC TERM 2688 2009876 - 2009896 + G 71 -6.1 -4.24326 | AAGAAGTGCTTGATG CTTGGGGAG CCG CTTACCAAG TTTTGGCTGATGTTT TERM 2689 2010254 - 2010272 + G 73 -2.3 -5.31519 | overlap 2010256 2010258 GAGACATCTTACAAG TTGCCGC ACCAG GGGGCGA TTTTTATTTAGATAT hmp 2009521 - 2010711 + | flavohemoprotein TERM 2690 2010755 - 2010780 + T 89 -7.6 -5.0916 | opp_overlap 2010755 AATAATAAGGAAAAA GCGCTGATTA TTTTAC TATTCAGCGC TTTTTATATTGGAAA TERM 2691 2010780 - 2010755 - T 89 -7.6 -5.03201 | opp_overlap 2010755 AATAATAAGGAAAAA GCGCTGATTA TTTTAC TATTCAGCGC TTTTTATATTGGAAA PMI1869 2011448 - 2010807 - | hypothetical protein TERM 2692 2011420 - 2011404 - G 89 -5.9 -5.45802 | GGCGGAAAACAAAAA TAAAGCA AAA CGCTTTA ATAAATAGCTAAGCA TERM 2693 2011805 - 2011778 - R 100 -7.9 -5.90231 | opp_overlap 2011778 ATAAAGATAAAAAAA CCTGATAATTA AACTAA TAATCATCAGG TTTCATAAACAACGC glnB 2012170 - 2011832 - | nitrogen regulatory protein P-II nadE 2013802 - 2012186 - | glutamine-dependent NAD(+) synthetase TERM 2694 2013411 - 2013436 + g 75 -5.6 -4.7373 | gap 1, opp_overlap 2013411 AAAGGCACAACACAA CGTTCATTTCC TTGCT GGAAAT-AACG TTTTTCATCAAATAC PMI1872 2015214 - 2013877 - | two-component system response regulator (sigma-54 interacting regulator) PMI1873 2016152 - 2015226 - | lipoprotein PMI1874 2017684 - 2016236 - | two-component system sensor kinase TERM 2695 2017797 - 2017848 + r 73 -8.2 -3.53768 | gap 1, opp_overlap 2017802 2017845, overlap 2017796 2017800 2017802 CACGCAACAGGCTCT AGAA-ATGGGAGAGCGGAATATCTT ACT GAGATATTCCGCTCGTCAATATTCA TCTCTTTTCTCTCTA TERM 2696 2017800 - 2017844 + r 84 -10.1 -3.4791 | opp_overlap 2017802, overlap 2017797 2017796 2017802 GCAACAGGCTCTAGA AATGGGAGAGCGGAATATCTT ACT GAGATATTCCGCTCGTCAATA TTCATCTCTTTTCTC TERM 2697 2017802 - 2017842 + r 100 -12.7 -3.29269 | opp_overlap 2017802, overlap 2017800 2017797 2017796 AACAGGCTCTAGAAA TGGGAGAGCGGAATATCTT ACT GAGATATTCCGCTCGTCAA TATTCATCTCTTTTC TERM 2698 2017842 - 2017802 - R 83 -9.8 -3.87641 | opp_overlap 2017800 2017797 2017796 2017802 AACAGGCTCTAGAAA TGGGAGAGCGGAATATCT TACTG AGATATTCCGCTCGTCAA TATTCATCTCTTTTC TERM 2699 2018248 - 2018231 - R 74 -7.7 -3.8579 | ATTCAACAAGTTAAA TGTCACC TTTT GGCGACA ATGAAAAAACGATGT TERM 2700 2018270 - 2018258 - R 76 -3.3 -5.32944 | opp_overlap 2018258 GCGACAATGAAAAAA CGATG TGT CGTCG ATTTTATACATTGAT TERM 2701 2018335 - 2018316 - R 100 -10.7 -4.90302 | opp_overlap 2018316 TATCAACAAAATAAA GCCCCTC TAACTT GAGGGGC TTTGGGTTATAACAC TERM 2702 2018316 - 2018335 + r 89 -10.7 -3.80625 | opp_overlap 2018316 TATCAACAAAATAAA GCCCCTC TAACTT GAGGGGC TTTGGGTTATAACAC purL 2022262 - 2018372 - | phosphoribosylformylglycineamide synthetase TERM 2703 2018779 - 2018769 - G 71 -6.8 -4.08064 | opp_overlap 2018768, overlap 2018770 AAGCGGGCTTCAAAA CGCT CTG AGCG ATTGCGTACAAAGCG TERM 2704 2022251 - 2022237 - G 71 -7 -3.97406 | CGAAAAGCGGATAAA GCGGGG GAG CCACGC AGGATTTCCATAATA PMI1876 2022527 - 2023996 + | transglycosylase pmfA 2024828 - 2025382 + | major fimbrial subunit TERM 2705 2025433 - 2025452 + F 100 -13.6 -3.19192 | opp_overlap 2025424 2025433, overlap 2025421 TAATTACTGCGAAAA CGCAGAGG ATTT CCTCTGCG TTAAATTCAATAAAA TERM 2706 2025452 - 2025433 - f 100 -13.6 -4.12902 | opp_overlap 2025421 2025433, overlap 2025424 TAATTACTGCGAAAA CGCAGAGG ATTT CCTCTGCG TTAAATTCAATAAAA TERM 2707 2025523 - 2025493 - f 100 -7.2 -5.74684 | opp_overlap 2025493, overlap 2025481 TAATAAAAATAAAAA GTAATTAAATAA ATATTTA TTATTTAATTAC TTTTTATTTAATATA TERM 2708 2025493 - 2025523 + F 100 -7.2 -5.35815 | opp_overlap 2025481 2025493 TAATAAAAATAAAAA GTAATTAAATAA ATATTTA TTATTTAATTAC TTTTTATTTAATATA TERM 2709 2025874 - 2025862 - g 70 -2.7 -5.0133 | TACTCTTTTAAAAAA GTTAA CAA TCAAC CAAGAAAACCAAAAA TERM 2710 2026598 - 2026614 + G 77 -7.9 -4.28548 | TTGCCTTATATGACT CGCCCAG GAT CTGTGCG TTTTAATACCTCACT pmfC 2025557 - 2028043 + | outer membrane usher protein pmfD 2028075 - 2028839 + | fimbrial chaperone protein pmfE 2028865 - 2029938 + | minor fimbrial subunit TERM 2711 2030155 - 2030143 - g 91 -7.7 -5.31877 | opp_overlap 2030143 ATTCACTACAAAAAA GCAAC CCC GTTGC TTTTAGTATCAGTTT TERM 2712 2030143 - 2030155 + G 80 -7.7 -4.37534 | opp_overlap 2030143 ATTCACTACAAAAAA GCAAC CCC GTTGC TTTTAGTATCAGTTT pmfF 2029938 - 2030486 + | minor fimbrial subunit TERM 2713 2030518 - 2030490 - T 77 -7.5 -4.01047 | opp_overlap 2030494, overlap 2030494 AATTACCAATAACAA TTAAGCCAAATAG ATG CTATTTGGCTTTC TCTTGTATGATTAAA TERM 2714 2030494 - 2030514 + T 100 -12.7 -4.31766 | opp_overlap 2030490 2030494 ACCAATAACAATTAA GCCAAATAG ATG CTATTTGGC TTTCTCTTGTATGAT TERM 2715 2030514 - 2030494 - T 100 -12.7 -3.62857 | opp_overlap 2030494, overlap 2030490 ACCAATAACAATTAA GCCAAATAG ATG CTATTTGGC TTTCTCTTGTATGAT tadA 2031036 - 2030506 - | tRNA-specific adenosine deaminase TERM 2716 2031505 - 2031490 - g 83 -9 -4.00782 | GGACATTATGATAAA CCGACT TGTC AGTCGG TATGCCCTATCACGA PMI1883 2031349 - 2031609 + | ferredoxin acpS 2032019 - 2031639 - | holo-[acyl-carrier protein] synthase TERM 2717 2031941 - 2031958 + g 79 -11.3 -2.64695 | overlap 2031940 2031938 GAATACGTCGCGCGA GGCGTTC TCCT GAACGCC CTATTATCTCTTCAA pdxJ 2032750 - 2032019 - | pyridoxal phosphate biosynthetic protein recO 2033560 - 2032820 - | DNA repair protein era 2034481 - 2033573 - | GTP-binding protein TERM 2718 2033649 - 2033669 + g 73 -6.9 -4.15006 | opp_overlap 2033653, overlap 2033652 GCTTTTACTTTCACC CAAAGTTCA AGA TGAACCTTG TTTTCAAATAAATCT rnc 2035158 - 2034478 - | RNase III, ds RNA TERM 2719 2035256 - 2035288 + r 82 -10 -3.35046 | gap 1, overlap 2035254 2035260 CAGAACTGTTGCGTT TGCACTGGCTCCTGT TTAT ACAGGAGCCAAT-CA TGTTTAAAGAAGTGG TERM 2720 2035260 - 2035285 + r 88 -11.9 -2.84325 | overlap 2035256 2035254 ACTGTTGCGTTTGCA CTGGCTCCTGT TTAT ACAGGAGCCAA TCATGTTTAAAGAAG lepB 2036325 - 2035354 - | signal peptidase I lepA 2038136 - 2036340 - | GTP-binding elongation factor TERM 2721 2036433 - 2036447 + g 86 -4.3 -5.45652 | TTTTTTACCTTCTTT CTGTT TCTGC AACAG TTTTTTCTTACGGCT TERM 2722 2036582 - 2036593 + g 70 -3 -5.00884 | ACTGTTGACGTGGAA TGAA TTCT TTCA TTTTTTCCACCAACT TERM 2723 2038131 - 2038143 + g 71 -4.9 -4.62708 | AAAGTTACGTATGTT TTTCA TTC TGAAA TTATTTTTCTCTATT TERM 2724 2038431 - 2038416 - R 100 -6.8 -5.95946 | opp_overlap 2038409 2038416 TTAATAACAAAAAAA TGGAGC CTAT GCCCCA TTTTTTATCATATTC TERM 2725 2038416 - 2038431 + r 81 -4.6 -5.36965 | opp_overlap 2038416, overlap 2038409 TTAATAACAAAAAAA TGGAGC CTAT GCCCCA TTTTTTATCATATTC rseC 2038922 - 2038458 - | sigma-E factor regulatory protein rseB 2039906 - 2038935 - | anti sigma E (sigma 24) factor, negative regulator TERM 2726 2039846 - 2039812 - G 71 -6.3 -4.15222 | opp_overlap 2039812 ATCTTTTGCAACAAA GCCTCGGCATTTCCT ATTTG AGGTTGTGCCAAGGC TTGTGTTGGTATTGA rseA 2040578 - 2039955 - | anti sigma E protein rpoE 2041194 - 2040616 - | RNA polymerase sigma-E factor TERM 2727 2040914 - 2040926 + g 72 -10.5 -2.64218 | overlap 2040913 TCTAAGTCATTTGAA GGCGG ACG CCGCC CTTGTGCTACCAGAT PMI1895 2041525 - 2041301 - | hypothetical protein PMI1896 2042253 - 2041495 - | hypothetical protein TERM 2728 2043356 - 2043332 - g 74 -4.3 -4.93296 | GCAGCATTAGAAAAA CAAGGTATC AAAGCCA GCTACCTTG AAGGCGAAATGGCTC srmB 2042522 - 2043877 + | ATP-dependent RNA helicase TERM 2729 2043945 - 2043909 - T 91 -12.5 -3.51329 | opp_overlap 2043909 2043916, overlap 2043916 TACTTTGAACCATAA TAATAAACCGTCGTTAT TTA ATAGCGACGGTTTTTTA TCTTATCTTCTTTAT TERM 2730 2043909 - 2043945 + T 100 -14.7 -3.54019 | opp_overlap 2043909 2043916, overlap 2043916 TACTTTGAACCATAA TAATAAACCGTCGTTAT TTA ATAGCGACGGTTTTTTA TCTTATCTTCTTTAT TERM 2731 2043916 - 2043938 + T 100 -12.8 -5.53436 | opp_overlap 2043916 2043909, overlap 2043909 AACCATAATAATAAA CCGTCGTTAT TTA ATAGCGACGG TTTTTTATCTTATCT TERM 2732 2043938 - 2043916 - T 95 -10.6 -4.54323 | opp_overlap 2043909 2043916, overlap 2043909 AACCATAATAATAAA CCGTCGTTAT TTA ATAGCGACGG TTTTTTATCTTATCT TERM 2733 2043994 - 2043975 - T 100 -7.2 -5.72622 | opp_overlap 2043975 TTGATAAACAAAAAA CCTGATAT AAAC ATACCAGG TTCTATCATTACTTA grcA 2044410 - 2044027 - | autonomous glycyl radical cofactor TERM 2734 2044287 - 2044302 + g 72 -3.2 -5.00884 | overlap 2044275 CACGGCTAACAACTT GGCCTT CTTC AAAGCC TTTTTTCGCACAAAT TERM 2735 2044618 - 2044637 + H 71 -2.2 -5.47218 | ATATAATTGCAATTT TTTTTGTA AATT TTCAAAAA TTTTTTTAAATAACA ung 2044745 - 2045425 + | uracil-DNA glycosylase TERM 2736 2045462 - 2045447 - T 100 -10.4 -5.02287 | opp_overlap 2045447 GATAAAAACACAAAA CCGCAC AAAA GTGCGG TTTACTTATCCCACG TERM 2737 2045447 - 2045462 + T 91 -10.4 -3.9941 | opp_overlap 2045447 GATAAAAACACAAAA CCGCAC AAAA GTGCGG TTTACTTATCCCACG grpE 2046128 - 2045517 - | heat shock protein ppnK 2046230 - 2047129 + | probable inorganic polyphosphate/ATP-NAD kinase TERM 2738 2047378 - 2047402 + G 71 -7.1 -3.86194 | opp_overlap 2047398 GTGATGCTAATATGG TTCGCCCTGGT GCC ACTAGAGCGGA TTTATGCGCACGATT recN 2047215 - 2048876 + | DNA repair protein RecN smpA 2048990 - 2049352 + | lipoprotein TERM 2739 2049381 - 2049413 + T 72 -5.7 -4.37092 | gap 1, overlap 2049383 TTGGCAAAAACGAAC TGCACCCCATTTGT AATTCA AC-AATGGGGTGTG TTTTATAACCAACAT TERM 2740 2049383 - 2049411 + T 77 -8.3 -3.79419 | gap 1, overlap 2049381 GGCAAAAACGAACTG CACCCCATTTGT AATTCA AC-AATGGGGTG TGTTTTATAACCAAC PMI1904 2049777 - 2049484 - | hypothetical protein PMI1905 2050204 - 2049770 - | hypothetical protein TERM 2741 2050780 - 2050763 - g 73 -2 -5.22039 | gap 1, overlap 2050765 GCTAAAGGTAAAAAA GATCACG ATAAG CGTGA-C ACCATAAAAGATCGT smpB 2050361 - 2050843 + | SsrA-binding protein (small protein B) TERM 2742 2051005 - 2050986 - T 76 -6.4 -4.67168 | AAAAAGCCGCAAAAA GATAGTCG CAAA CGACAATC AATATAAAGCACTAG TERM 2743 2051406 - 2051396 - T 75 -8.2 -3.69469 | opp_overlap 2051397, overlap 2051394 2051397 ACATTTGAATAAAGA GCCC CAA GGGC AACTCCTTGGGGTTT TERM 2744 2051418 - 2051397 - T 86 -11.6 -2.80958 | opp_overlap 2051397, overlap 2051396 2051394 CATTTGAATAAAGAG CCCCAAGG GCAACT CCTTGGGG TTTTCTATTTGTAAC TERM 2745 2051397 - 2051418 + T 100 -12.3 -4.84918 | opp_overlap 2051396 2051394 2051397 CATTTGAATAAAGAG CCCCAAGGG CAAC TCCTTGGGG TTTTCTATTTGTAAC TERM 2746 2051788 - 2051773 - T 72 -3.4 -5.2112 | opp_overlap 2051773 2051776 AATATGACTAAAAAA TATTAT ATTC ATAATA TGTTCTGGGGCTATT PMI1907 2052092 - 2051841 - | hypothetical protein TERM 2747 2052110 - 2052081 - G 100 -9.5 -5.26918 | opp_overlap 2052083 ATATTTCACAAAAAA TAGGATAACCAAT TAAA ATCGATTATCCTA TTAGCCTACATATTA PMI1908 2053817 - 2052123 - | colicin TERM 2748 2052646 - 2052630 - G 76 -6.7 -4.3739 | overlap 2052636 TACTTTCTCATAAAA TGAAATT GTA AATTTCA CACCATCTTTGATGT TERM 2749 2053054 - 2053064 + g 72 -4.6 -4.78266 | TCAGTTCCAACTAAC GCGG CAT TCGC TTTATTGTTTTCTTT PMI1909 2054515 - 2053973 - | hypothetical protein imm 2054886 - 2054551 - | colicin immunity protein PMI1911 2056208 - 2054883 - | colicin TERM 2750 2055847 - 2055857 + g 73 -6.8 -4.19974 | overlap 2055855 AAAACAGCAACAGGC GCGA GTG TCGC TTTATTAAGCGTTTT TERM 2751 2055855 - 2055868 + g 81 -6.7 -4.7373 | overlap 2055847 2055867 AACAGGCGCGAGTGT CGCTT TATT AAGCG TTTTTCCTGGAATAA PMI1912 2058124 - 2056688 - | FtsK/SpoIIIE-family protein TERM 2752 2058700 - 2058712 + r 74 -6.3 -4.4261 | TTTTGGAGCATCTTT TGCAA CAG TTGCA TTTTAGTATTCGGCA TERM 2753 2059008 - 2058994 - R 73 -7.8 -3.57239 | opp_overlap 2058994 ACGCAAATATCATAA GCGGCT TTC AACCGC TTTACTAAGCCCATA TERM 2754 2059747 - 2059772 + r 89 -9.1 -4.43307 | TTGATTAGCAGTATC CCAAAGGGTTT CTTC AAAGCCTTTGG TTGTTTTCTTCGCGG PMI1915 2060541 - 2059975 - | hypothetical protein TERM 2755 2060053 - 2060065 + g 82 -7.7 -4.5528 | opp_overlap 2060053 TTTTGCTGTAACCCA TACGG TTC CCGTA TTTTCCTTGGTTTTC TERM 2756 2061131 - 2061111 - g 76 -3.3 -5.19328 | ACGGCACAACAAAAA TGATATTCC AAA AGATTATCA TCACTATTGTCGAGT TERM 2757 2061307 - 2061319 + G 71 -6.9 -4.07746 | overlap 2061298 2061303 CAGCGTTCCATGTCA CGGCC ATG GGCTG TTGTCTTTTTAACAC PMI1916 2060770 - 2061540 + | hypothetical protein PMI1917 2061556 - 2062206 + | hypothetical protein PMI1920 2063649 - 2064344 + | fimbrial subunit TERM 2758 2064359 - 2064397 + T 80 -9.2 -3.75897 | opp_overlap 2064358 2064357 2064354 2064361 2064364, overlap 2064358 2064364 ATTTTTAAAATAACT GATAATCACAATATCA TTAACTT TTATATTGTGATTATC TTTACGTTAAAAGTT PMI1921 2065582 - 2064461 - | hypothetical protein PMI1922 2066088 - 2066783 + | fimbrial subunit TERM 2759 2066841 - 2066791 - T 70 -7.2 -3.66178 | opp_overlap 2066796 2066797 2066836 GTGTCTAATTTTAAA GTAATTGATAATCACAATATCA TTAATTT TTATATTGTGATTATCTTTTAC GTTAAAAATTTAACA TERM 2760 2066797 - 2066835 + T 88 -9.2 -4.27584 | opp_overlap 2066791, overlap 2066796 AATTTTAAAGTAATT GATAATCACAATATCA TTAATTT TTATATTGTGATTATC TTTTACGTTAAAAAT PMI1923 2068037 - 2066910 - | hypothetical protein PMI1924 2068566 - 2069273 + | fimbrial subunit TERM 2761 2069331 - 2069281 - T 77 -8.6 -3.66178 | opp_overlap 2069287, overlap 2069286 2069289 2069292 GTGTCTAATTTTAAA GTAATTGATAATCACAATATAATT AAA ATTTATATTGTGATTATCTTTTGC TATCAATAAGAACCC TERM 2762 2069326 - 2069286 - T 86 -11.5 -2.72211 | opp_overlap 2069287, overlap 2069281 2069289 2069292 TAATTTTAAAGTAAT TGATAATCACAATATAATT AAA ATTTATATTGTGATTATCT TTTGCTATCAATAAG TERM 2763 2069287 - 2069325 + T 100 -15 -4.3586 | opp_overlap 2069286 2069281 2069289 2069292 AATTTTAAAGTAATT GATAATCACAATATAATT AAA ATTTATATTGTGATTATC TTTTGCTATCAATAA TERM 2764 2069323 - 2069289 - T 87 -11.8 -2.6342 | opp_overlap 2069287, overlap 2069286 2069281 2069292 TTTTAAAGTAATTGA TAATCACAATATAATT AAA ATTTATATTGTGATTA TCTTTTGCTATCAAT TERM 2765 2069320 - 2069292 - T 78 -9.1 -3.46205 | opp_overlap 2069287, overlap 2069289 2069286 2069281 TAAAGTAATTGATAA TCACAATATAATT AAA ATTTATATTGTGA TTATCTTTTGCTATC PMI1925 2071633 - 2069390 - | hypothetical protein PMI1926 2072269 - 2071796 - | hypothetical protein PMI1927 2072496 - 2072753 + | hypothetical protein TERM 2766 2072766 - 2072798 + F 89 -10.8 -3.6393 | opp_overlap 2072771, overlap 2072771 TGAATTAGGGTCAAT GAAAAGATCCTAGT TCAAT ACTAGGATCTTTTG TATTTATCTCATCCC TERM 2767 2072793 - 2072771 - f 95 -10.7 -4.41494 | opp_overlap 2072766 2072771 TAGGGTCAATGAAAA GATCCTAGT TCAAT ACTAGGATC TTTTGTATTTATCTC TERM 2768 2072771 - 2072793 + F 100 -10.7 -4.87328 | opp_overlap 2072771, overlap 2072766 TAGGGTCAATGAAAA GATCCTAGT TCAAT ACTAGGATC TTTTGTATTTATCTC PMI1928 2072954 - 2073184 + | hypothetical protein TERM 2769 2073266 - 2073248 - f 89 -7.6 -5.05782 | opp_overlap 2073248 ACTTACTCTAAAAAA GATAAAAA TTA TTTTTATC TTTAGTAATATCTAT TERM 2770 2073248 - 2073266 + F 74 -7.6 -3.8381 | opp_overlap 2073248 ACTTACTCTAAAAAA GATAAAAA TTA TTTTTATC TTTAGTAATATCTAT PMI1929 2073454 - 2074140 + | fimbrial subunit TERM 2771 2074155 - 2074198 + F 89 -10.8 -3.76226 | gap 1, opp_overlap 2074160, overlap 2074160 AATTTCAAAATCATT GATAATCACAATATAAATATA TGT TA-ATTTTTATTGTGATTATC TTGTGTTATCAACTT PMI1930 2074733 - 2075128 + | hypothetical protein mqo 2075140 - 2076636 + | malate:quinone oxidoreductase TERM 2772 2076657 - 2076688 + T 100 -7.5 -5.65927 | opp_overlap 2076657 2076662 TCTTACCGATAAAAA TAAAACAGACC GGAAATTAAA GGTCTGTTTTA TTTTTTATTTGCATC TERM 2773 2076688 - 2076657 - T 87 -7.5 -4.87665 | opp_overlap 2076657, overlap 2076662 TCTTACCGATAAAAA TAAAACAGACC GGAAATTAAA GGTCTGTTTTA TTTTTTATTTGCATC TERM 2774 2076683 - 2076662 - T 74 -3 -5.35224 | opp_overlap 2076657, overlap 2076657 CCGATAAAAATAAAA CAGACC GGAAATTAAA GGTCTG TTTTATTTTTTATTT PMI1932 2077671 - 2076748 - | transporter TERM 2775 2077640 - 2077623 - G 76 -7 -4.43477 | overlap 2077637 GCCAGCCAACTAAAA GCCCTA AGATAA TAGGGC CCAGCGCTGCTAAAA PMI1933 2078669 - 2078091 - | hypothetical protein TERM 2776 2078133 - 2078147 + g 85 -4.2 -5.60689 | overlap 2078134 TAGCTGTTGATGCTG TTGCTC AAA GAGCAC TTTTTTCTTATCTGC TERM 2777 2078134 - 2078146 + g 73 -7.7 -3.94787 | overlap 2078133 AGCTGTTGATGCTGT TGCTC AAA GAGCA CTTTTTTCTTATCTG mdaB 2079276 - 2078698 - | modulator of drug activity B (subunit of NADPH quinone reductase) TERM 2778 2079664 - 2079682 + H 88 -7.4 -5.01811 | opp_overlap 2079663 2079662 ATATTGTATGAAATT GCGACTCA TAA TGAATCGC TTTTTGATTTAATCG TERM 2779 2080659 - 2080636 - H 74 -4 -5.29885 | AATTTAAAAATAAAA CATTATTATT TATT AATTATAATG AAAGATAAAATATAA TERM 2780 2082676 - 2082644 - g 71 -6.9 -3.9712 | overlap 2082645 2082647 TGATTTCACCACAAA GCATCGCGATCGCCG TTT CGGCGACCAAAATGG ATGGGCAAAGCAGTG TERM 2781 2082675 - 2082645 - g 75 -10.4 -2.97951 | overlap 2082644 2082647 GATTTCACCACAAAG CATCGCGATCGCCG TTT CGGCGACCAAAATG GATGGGCAAAGCAGT PMI1935 2081254 - 2082780 + | L-lactate permease PMI1936 2082917 - 2083636 + | oxidoreductase subunit PMI1937 2083647 - 2085068 + | iron-sulphur protein protein PMI1938 2085070 - 2085774 + | hypothetical protein TERM 2782 2085842 - 2085872 + T 100 -12.8 -3.99898 | opp_overlap 2085842 2085849, overlap 2085849 ACGGATTGACCCAAA TACAAAACACCTTT TAT ACAGGTGTTTTGTA TTTATGGCTTAATTA TERM 2783 2085872 - 2085842 - T 100 -12.8 -3.66999 | opp_overlap 2085842 2085849, overlap 2085849 ACGGATTGACCCAAA TACAAAACACCTTT TAT ACAGGTGTTTTGTA TTTATGGCTTAATTA TERM 2784 2085865 - 2085849 - T 72 -5.1 -4.80455 | opp_overlap 2085849 2085842, overlap 2085842 GACCCAAATACAAAA CACCTTT TAT ACAGGTG TTTTGTATTTATGGC TERM 2785 2085849 - 2085865 + T 72 -5.1 -4.84918 | opp_overlap 2085842 2085849, overlap 2085842 GACCCAAATACAAAA CACCTTT TAT ACAGGTG TTTTGTATTTATGGC umoC 2086294 - 2085881 - | upregulator of flagellar master operon TERM 2786 2087056 - 2087071 + G 70 -3.2 -4.85782 | overlap 2087058 CGGTTTTATTTTAAT TGGTGC GGGT GCGCTA TTTATTTTTAAGGGG PMI1940 2086742 - 2087095 + | hypothetical protein TERM 2787 2087141 - 2087158 + F 100 -8.5 -5.86976 | opp_overlap 2087133 2087141 TGAAAATTTTCAAAA CCTCATT TCGA AATGAGG TTTTTTGTTTTGTAG TERM 2788 2087158 - 2087141 - f 87 -8.5 -4.19276 | opp_overlap 2087141, overlap 2087133 TGAAAATTTTCAAAA CCTCATT TCGA AATGAGG TTTTTTGTTTTGTAG TERM 2789 2087217 - 2087199 - f 88 -6.1 -5.46657 | opp_overlap 2087199 2087198 CAGTCGAACAAAAAA CAATCAA AATAA TTGATTG CTATTATTAAGTACT TERM 2790 2087337 - 2087327 - f 74 -5.4 -4.91511 | opp_overlap 2087327 ATTTGACTACAAAAA GCAA ATA TTGC TCTTGAAAAAATATT TERM 2791 2087380 - 2087396 + F 72 -5.1 -4.86861 | ATAATAGCTAGCTAA GAGAGGC ATT GTTTCTC TTTCTTTCTTTGTTG TERM 2792 2087540 - 2087554 + G 70 -7.8 -3.6878 | overlap 2087532 2087539 CCCTGTATGCATTGT GGTGCA TGT TGCGCC TATTTTAGAGTCTCT PMI1941 2087513 - 2087866 + | hypothetical protein TERM 2793 2087893 - 2087871 - T 74 -8.5 -3.21395 | gap 1, opp_overlap 2087870 2087866 2087871, overlap 2087869 2087874 ATTCTGCGTAGAACA TCA-GAGGGG CTAG CCCCTCCTGA GTCTCTTTGATCACA TERM 2794 2087889 - 2087874 - T 81 -10.4 -2.80074 | opp_overlap 2087871 2087870 2087866, overlap 2087871 2087869 CTGCGTAGAACATCA GAGGGG CTAG CCCCTC CTGAGTCTCTTTGAT TERM 2795 2088201 - 2088255 + T 79 -8.8 -3.7645 | opp_overlap 2088193 2088176 2088207, overlap 2088207 2088250 GAAAATATTCTCCCC CAGAAATAGACGCCCATACCAAAA TAATTAT TTTTAGTATGGGCGTCTATTAATA TTATATTAATTAACT TERM 2796 2088249 - 2088207 - T 100 -18.8 -3.85817 | opp_overlap 2088207 2088201, overlap 2088176 ATTCTCCCCCAGAAA TAGACGCCCATACCAAAA TAATTAT TTTTAGTATGGGCGTCTA TTAATATTATATTAA TERM 2797 2088207 - 2088249 + T 100 -16.6 -3.46629 | opp_overlap 2088176 2088207, overlap 2088201 ATTCTCCCCCAGAAA TAGACGCCCATACCAAAA TAATTAT TTTTAGTATGGGCGTCTA TTAATATTATATTAA PMI1942 2088945 - 2088334 - | hypothetical protein TERM 2798 2089079 - 2089054 - R 100 -10.5 -6.13503 | opp_overlap 2089054, overlap 2089072 CATCAATAAAAAAAA CCGAGTTACTC TTAA AAGCAACTCGG TTGATATCAAAGAAT PMI1943 2090278 - 2089112 - | MFS-family transporter TERM 2799 2090135 - 2090116 - G 71 -6.4 -4.21744 | ATCCAATAAAGTAAA TGCTTGCT AACC AGCTAGCA TAAAAAGTATCAATA TERM 2800 2090626 - 2090594 - R 90 -11.5 -3.49777 | opp_overlap 2090597 2090622, overlap 2090597 2090620 GCGCACAGAGCAGAA TAGCGGCTATTTTAT TAA ATAAAACAGCCGTTA ATAACAACGCTTATT TERM 2801 2090597 - 2090623 + r 84 -11 -3.14463 | opp_overlap 2090597 2090594 2090620, overlap 2090622 CACAGAGCAGAATAG CGGCTATTTTAT TAA ATAAAACAGCCG TTAATAACAACGCTT TERM 2802 2090623 - 2090597 - R 100 -13.2 -2.58783 | opp_overlap 2090597 2090622, overlap 2090594 2090620 CACAGAGCAGAATAG CGGCTATTTTAT TAA ATAAAACAGCCG TTAATAACAACGCTT PMI1944 2091494 - 2090637 - | hypothetical protein TERM 2803 2091533 - 2091559 + r 76 -9.5 -3.10611 | opp_overlap 2091537, overlap 2091532 TATCAAATGATGGCA GTAAGCCCCAT AATAA ATGAGGCTTAC CTTTATTGAGATAGA ireA 2093614 - 2091575 - | TonB-dependent ferric siderophore receptor TERM 2804 2093811 - 2093793 - R 100 -10.3 -5.66684 | opp_overlap 2093793 GAAGTGACAAAAAAA GCAGAGC TATTG GCTCTGC TTTTTTTTGTAATAC TERM 2805 2093793 - 2093811 + r 100 -11 -5.9873 | opp_overlap 2093793 GAAGTGACAAAAAAA GCAGAGCT ATT GGCTCTGC TTTTTTTTGTAATAC sglT 2095486 - 2093852 - | sodium/glucose cotransporter TERM 2806 2093915 - 2093925 + g 73 -6.8 -4.28656 | opp_overlap 2093915 2093910 AGAAGCAATATTGAA CCCA CTT TGGG TTTTAAATGTTGCAT TERM 2807 2095847 - 2095797 - R 70 -7.3 -3.5771 | gap 1, opp_overlap 2095801 2095802 2095811, overlap 2095801 2095802 AAAAAGGCGCTTAAA CAAAC-TGTTATAAACTTCTGA GCCTATTA TCAGAAGTTTGTAACATGTTTA AAGTATAATGGATGA TERM 2808 2095801 - 2095843 + r 75 -8.1 -3.64599 | gap 1, opp_overlap 2095797 2095801 2095802, overlap 2095802 2095811 AGGCGCTTAAACAAA C-TGTTATAAACTTCTGA GCCTATTA TCAGAAGTTTGTAACATG TTTAAAGTATAATGG TERM 2809 2095842 - 2095801 - R 74 -6.1 -4.41616 | opp_overlap 2095801 2095802 2095811, overlap 2095797 2095802 AGGCGCTTAAACAAA CTGTTATAAACTTCTGA GCCTATTA TCAGAAGTTTGTAACAT GTTTAAAGTATAATG TERM 2810 2095841 - 2095802 - R 78 -9.6 -3.24488 | opp_overlap 2095801 2095802 2095811, overlap 2095801 2095797 GGCGCTTAAACAAAC TGTTATAAACTTCTGA GCCTATTA TCAGAAGTTTGTAACA TGTTTAAAGTATAAT TERM 2811 2095802 - 2095841 + r 91 -11.8 -3.40112 | opp_overlap 2095802 2095801 2095797, overlap 2095801 2095811 GGCGCTTAAACAAAC TGTTATAAACTTCTGA GCCTATTA TCAGAAGTTTGTAACA TGTTTAAAGTATAAT galR 2096873 - 2095863 - | galactose operon repressor (LacI-family transcriptional regulator) TERM 2812 2097044 - 2097025 - R 100 -8.6 -5.34055 | opp_overlap 2097025 ATAAACAGTAAAAAA GGAAAGCG TTTA CACTTTCC TTTATCTATTACTGA TERM 2813 2097025 - 2097044 + r 70 -6.4 -4.22927 | opp_overlap 2097025 ATAAACAGTAAAAAA GGAAAGCG TTTA CACTTTCC TTTATCTATTACTGA galM 2098123 - 2097053 - | aldose 1-epimerase galK 2099282 - 2098110 - | galactokinase TERM 2814 2098780 - 2098791 + g 72 -4.4 -4.72556 | ATACCGCAATTGCAT CCAA CAAA TTGG TTTTCTGCTTTTTGA galT 2100452 - 2099394 - | galactose-1-phosphate uridylyltransferase galE 2101517 - 2100501 - | UDP-glucose 4-epimerase tkrA 2101949 - 2102908 + | 2-ketogluconate reductase (2-ketoaldonate reductase) TERM 2815 2102931 - 2102953 + T 89 -10.8 -3.63805 | opp_overlap 2102931 AAGAATAAAAAAAAA GGTAATAAAT ACA ATTTATTACC TTTAAACTATCAAAT TERM 2816 2102953 - 2102931 - T 100 -10.8 -6.44931 | opp_overlap 2102931 AAGAATAAAAAAAAA GGTAATAAAT ACA ATTTATTACC TTTAAACTATCAAAT PMI1953 2103899 - 2102982 - | cation efflux protein PMI1954 2104440 - 2104877 + | universal stress protein TERM 2817 2104889 - 2104908 + T 95 -12.2 -3.61356 | opp_overlap 2104889 TTAGTTGTAAAAAAA GCCCTTTG AAAA CAAAGGGC TTTCCACTCAATAAT TERM 2818 2104908 - 2104889 - T 100 -12.2 -5.42259 | opp_overlap 2104889 TTAGTTGTAAAAAAA GCCCTTTG AAAA CAAAGGGC TTTCCACTCAATAAT eco 2105422 - 2104940 - | ecotin precursor PMI1956 2105684 - 2105899 + | hypothetical protein TERM 2819 2105944 - 2105964 + F 100 -11.2 -5.37345 | opp_overlap 2105948 TATCAGCGACCTGAA GCGATGAC CTTTT GTCATCGC TTTTTTATGATTAAA PMI1957 2106043 - 2106282 + | hypothetical protein TERM 2820 2106311 - 2106329 + T 71 -8.2 -3.18511 | opp_overlap 2106300 2106310 2106296 2106292 2106314, overlap 2106314 TAGATTGCCAGTAAG CAACATGT TTG GCATGTTG TTAACTATCTATCTA PMI1958 2106640 - 2106395 - | DNA-damage-inducible protein TERM 2821 2106683 - 2106668 - H 74 -6.2 -4.50761 | opp_overlap 2106666 2106668 ACCAAGGCAAATAAA CTGTAT ATAA ATACAG TATTATATAATCAAA TERM 2822 2106712 - 2106722 + H 85 -2.6 -6.12458 | opp_overlap 2106712 AAAAAAAGAAAAGTA TTTT TGC AAAA TTTTTTCTTTTTTTG TERM 2823 2106803 - 2106789 - H 79 -7.2 -4.46212 | opp_overlap 2106774 TGCGTTATGATAAAA TGCATT TTA AATGCA ACAATAAGAAGTGAG PMI1959 2106825 - 2107172 + | hypothetical protein PMI1960 2107710 - 2107150 - | acetyltransferase TERM 2824 2107633 - 2107607 - G 70 -8 -3.75332 | opp_overlap 2107610, overlap 2107610 AGTGGTGAAGGGAAA TAACGCATCACC GAT GCTGAGGCGTTA ATATGTAAAAAAAAT ccm 2108471 - 2107785 - | membrane protein (Ccm1 protein) TERM 2825 2107884 - 2107870 - G 77 -10 -3.42083 | opp_overlap 2107869 2107874, overlap 2107865 2107868 TTAATAGATACAACA CGTTGC TGT GCAACG GCTTTAGCTTGGTGT TERM 2826 2108873 - 2108826 - H 81 -10.2 -3.01177 | opp_overlap 2108826 2108830, overlap 2108821 2108830 ACAGATAAAATATGA GACATTAGTCACAAAAATAAAC TACC GTCTATTTTTAAGACTAATTTC TTGATACATTACTGG TERM 2827 2108869 - 2108830 - H 76 -9.6 -3.0641 | opp_overlap 2108830 2108826, overlap 2108826 2108821 ATAAAATATGAGACA TTAGTCACAAAAATAAAC TACC GTCTATTTTTAAGACTAA TTTCTTGATACATTA TERM 2828 2109221 - 2109241 + H 74 -8.5 -3.37257 | opp_overlap 2109210 2109220 GAAATATAACTAATT GTTATTTAT AGA ATAAATAAC TCTATTTCATTATCT PMI1962 2109559 - 2110395 + | AraC-family transcriptional regulator PMI1963 2110477 - 2111322 + | hypothetical protein TERM 2829 2111358 - 2111325 - T 85 -8.4 -4.42386 | gap 1, overlap 2111327 GTGGCATGTATAAAA TATCAGCTCTTC-AT TATTT ATAGAAGAGCTGACA ACGGTAATTTATTAA TERM 2830 2111356 - 2111327 - T 79 -8.8 -3.82117 | gap 1, overlap 2111325 GGCATGTATAAAATA TCAGCTCTTC-AT TATTT ATAGAAGAGCTGA CAACGGTAATTTATT PMI1964 2113848 - 2111380 - | exported FKBP-type peptidyl-prolyl cis-trans isomerase TERM 2831 2112605 - 2112618 + g 74 -4.5 -4.89063 | opp_overlap 2112605 TTCTTAGCTAGAGTA GCTTC AAAA GAGGC TTTGTTTTTAGCTAA TERM 2832 2113246 - 2113232 - G 78 -2.9 -5.38951 | overlap 2113239 AATTGATATAAAAAA TGAAA AGGTA TTTCA GTCACTGAATACACT PMI1965 2114306 - 2113854 - | hypothetical protein chrR 2114769 - 2115317 + | chromate reductase (NADPH-dependent FMN reductase) TERM 2833 2115345 - 2115374 + F 100 -10.2 -5.07652 | CCTAAATAGATTTCA CAGAGTGTAGTT TATAAT AATTACACTCTG TTTTATTTTAAAGAG PMI1967 2115818 - 2116027 + | hypothetical protein TERM 2834 2116067 - 2116100 + F 78 -6.8 -4.47707 | opp_overlap 2116067 2116069 2116072, overlap 2116064 2116069 2116070 2116072 TCCCCACCAATTTAA CATCATAGGATGCA CAATAT TGCATCCTATGCTC TTCTTTTTACTAAAA TERM 2835 2116069 - 2116098 + F 83 -9.4 -3.84027 | opp_overlap 2116069 2116067 2116072, overlap 2116067 2116064 2116070 2116072 CCCACCAATTTAACA TCATAGGATGCA CAATAT TGCATCCTATGC TCTTCTTTTTACTAA TERM 2836 2116098 - 2116069 - f 76 -9.4 -3.16676 | opp_overlap 2116067 2116064 2116069 2116070 2116072, overlap 2116067 2116072 CCCACCAATTTAACA TCATAGGATGCA CAATAT TGCATCCTATGC TCTTCTTTTTACTAA TERM 2837 2116070 - 2116097 + F 100 -12.9 -2.89331 | opp_overlap 2116069 2116067 2116072, overlap 2116069 2116067 2116064 2116072 CCACCAATTTAACAT CATAGGATGCA CAATAT TGCATCCTATG CTCTTCTTTTTACTA TERM 2838 2116072 - 2116095 + F 75 -9.7 -2.97636 | opp_overlap 2116072 2116069 2116067, overlap 2116070 2116069 2116067 2116064 ACCAATTTAACATCA TAGGATGCA CAATAT TGCATCCTA TGCTCTTCTTTTTAC TERM 2839 2116095 - 2116072 - f 74 -9.7 -2.78058 | opp_overlap 2116070 2116069 2116067 2116064 2116072, overlap 2116069 2116067 ACCAATTTAACATCA TAGGATGCA CAATAT TGCATCCTA TGCTCTTCTTTTTAC TERM 2840 2116241 - 2116252 + F 71 -3 -5.29385 | TAAAAGCGTTCTTTC TGTA CTAA TACA TTTTTTACTTGGATT TERM 2841 2116398 - 2116383 - g 71 -6.2 -4.25104 | opp_overlap 2116383 2116381 GTTGCGGCATTAAAA GTGATT TTAA AATCAC TATTACTTACATTAA PMI1968 2116335 - 2116544 + | hypothetical protein TERM 2842 2116936 - 2116950 + F 71 -8.6 -2.84794 | opp_overlap 2116938, overlap 2116933 2116938 TCGAACCCTCGTATA GAGCTT GGG AAGCTC TCGTTCTACCATTGA TERM 2843 2117105 - 2117090 - f 100 -9 -5.4251 | opp_overlap 2117104 TTTAGATATAAAAAA GCCATC TTGC GATGGC TATGAAATAGCTTTT TERM 2844 2117104 - 2117116 + F 76 -6.3 -4.72029 | opp_overlap 2117090 AGCCATCTTGCGATG GCTAT GAA ATAGC TTTTATTGCATTGAA TERM 2845 2117182 - 2117202 + F 95 -12.6 -3.75933 | opp_overlap 2117182 2117179 GACCACACTAAATCA TGCCCGGA AATTA TCCGGGCA TTTCATCAAATATCT TERM 2846 2117202 - 2117182 - f 90 -12.6 -3.00585 | opp_overlap 2117182, overlap 2117179 GACCACACTAAATCA TGCCCGGA AATTA TCCGGGCA TTTCATCAAATATCT PMI1969 2117376 - 2118083 + | hypothetical protein TERM 2847 2118111 - 2118086 - T 100 -9.7 -5.18866 | opp_overlap 2118089 2118090, overlap 2118089 2118090 GGCAAATAAATAAAA CAACGCCCGGA ATAC TCCGGGCATTT TCCTCAAATCGCTAA TERM 2848 2118089 - 2118108 + T 88 -9.2 -4.26903 | opp_overlap 2118086 2118089 2118090, overlap 2118090 AAATAAATAAAACAA CGCCCGGA ATAC TCCGGGCA TTTTCCTCAAATCGC TERM 2849 2118108 - 2118089 - T 100 -11.4 -4.64595 | opp_overlap 2118089 2118090, overlap 2118086 2118090 AAATAAATAAAACAA CGCCCGGA ATAC TCCGGGCA TTTTCCTCAAATCGC TERM 2850 2118107 - 2118090 - T 100 -12.7 -3.35097 | opp_overlap 2118090 2118089, overlap 2118089 2118086 AATAAATAAAACAAC GCCCGGA ATAC TCCGGGC ATTTTCCTCAAATCG TERM 2851 2118090 - 2118107 + T 100 -12.7 -3.1582 | opp_overlap 2118089 2118086 2118090, overlap 2118089 AATAAATAAAACAAC GCCCGGA ATAC TCCGGGC ATTTTCCTCAAATCG PMI1970 2118333 - 2118115 - | positive regulator of phage late gene transcription PMI1971 2119483 - 2118386 - | regulator of late phage gene expression TERM 2852 2118594 - 2118582 - G 70 -5.5 -4.43012 | overlap 2118585 AGGGTAATACTAAAA GAGGC AAC ACCTC GCTGTATTTTTTCCC PMI1972 2119953 - 2119483 - | phage tail assembly protein PMI1973 2122781 - 2119947 - | phage tail fiber protein (tape measure protein) TERM 2853 2120945 - 2120932 - G 72 -9.5 -2.92896 | ATCAGATAAACAGCA GCCGC AATA GCGGC AATAACCAATAAAAT TERM 2854 2121346 - 2121362 + g 72 -4.3 -4.66833 | CCGCTTAAGTTATCC GTCATGG TGC CCGCGAC TTTTTGCGCTTCACC TERM 2855 2121713 - 2121724 + g 71 -7.2 -3.91897 | CTAACTTCCCCGTTG CGGC GGCT GCCG TTTCTAAATCAACCC TERM 2856 2122202 - 2122222 + g 71 -4 -4.9448 | gap 1, overlap 2122195 CACCGGTTGCCGTCA TGGT-GGCA CCAG TGCCCGCCA TTTTATTTCGTACAT TERM 2857 2122668 - 2122694 + g 100 -16.6 -4.45386 | opp_overlap 2122662 TTTTAATGAGTCACG CGACTGGCGTAC AGC GGACGCCAGTCG TTTATTACTTTCTTG TERM 2858 2122895 - 2122875 - R 100 -9.7 -4.90266 | opp_overlap 2122874 2122875 GTGACCAATGAAAAA TGACGGCAA TAT CTGCCGCCA GTTCATCGGTGGTTA PMI1974 2123255 - 2122908 - | phage tail protein PMI1975 2123790 - 2123275 - | probable major tail tube protein PMI1976 2124966 - 2123794 - | probable major tail sheath protein PMI1977 2126697 - 2125066 - | phage variable tail fiber protein TERM 2859 2125691 - 2125701 + g 70 -8.2 -3.76402 | TTAGCGGTTTTCTGT GCGG CAT CCGC TTTGCTCACTCCACT TERM 2860 2126123 - 2126139 + g 90 -8.7 -4.92314 | CTATTGGCGTTTGTG TTAGCGG CAT CCGCTGA TTTTTGTACCTTACT PMI1978 2127298 - 2126687 - | phage tail protein TERM 2861 2126974 - 2126988 + g 74 -9.2 -3.53811 | CAAGGCGAAATGTGC CCGGCG GAT CGTCGG TTTGCCACCACTCAG PMI1979 2128199 - 2127291 - | phage baseplate assembly protein TERM 2862 2127321 - 2127341 + g 71 -6.9 -4.02581 | opp_overlap 2127340 ACCAATGGTTAAGGT GCTTTGTGT GCA ATACGAAGC TTGTGTTTTATCAAG TERM 2863 2127584 - 2127609 + g 70 -9.1 -3.22924 | gap 1, overlap 2127585 GGGCGGATTGCACTT TGATGCGATCAG CAA CTGGTCGCA-CA TCTTCATCGTTTAAC PMI1980 2128539 - 2128201 - | phage baseplate assembly protein PMI1981 2129162 - 2128536 - | phage baseplate assembly protein TERM 2864 2129040 - 2129068 + g 77 -8.1 -4.18018 | ACGTGCAGTCAGCCA CGGGCGCCAGT CGGTTTC ATTGTCGCCCG TTTTAACTCGACACC PMI1982 2129863 - 2129228 - | phage tail completion protein S TERM 2865 2129579 - 2129593 + g 100 -5.7 -6.09196 | TTCCAAGTCGTAACC GGTGA TCACC TCACC TTTTTTTGTTTTGCG TERM 2866 2129603 - 2129618 + g 72 -3.2 -5.0538 | CTCACCTTTTTTTGT TTTGCG TAAT CGCCAA TTTTTTAAACTGCGA TERM 2867 2129707 - 2129717 + g 79 -3.2 -5.40072 | GTTTGGTGAATGCGG TTCC ATC GGGA TTTTTTTGCGCGCGA PMI1983 2130290 - 2129853 - | phage tail completion protein R PMI1984 2130768 - 2130265 - | phage lysis protein PMI1985 2131169 - 2130765 - | phage protein PMI1986 2131476 - 2131162 - | phage holin TERM 2868 2131483 - 2131495 + r 74 -9.1 -3.14881 | CTTCTTCATACCTTC CCCCT TAA AGGGG TTAATCCCAAAGTTG PMI1987 2131702 - 2131496 - | phage tail protein X PMI1988 2132157 - 2131702 - | phage head completion/stabilization protein TERM 2869 2131784 - 2131803 + g 89 -5.6 -5.5074 | opp_overlap 2131784 CACACTTCATCAATA GCCGGCGT CATG GTGTCGGC TTTTTTATTACCTTG PMI1989 2132903 - 2132235 - | phage terminase, endonuclease subunit PMI1990 2134048 - 2132903 - | phage major capsid protein TERM 2870 2132951 - 2132965 + g 80 -10 -3.66908 | TTCTGTTACTGCTTT GTCGTC TTT GACGAC TTCATTTTCAGAAGC TERM 2871 2133942 - 2133956 + g 79 -8.6 -4.0641 | overlap 2133925 GTTTGCGCGGCAGAC GGTTCA ATT TGAACC TTTGTATCACTAAAC PMI1991 2134873 - 2134064 - | phage capsid scaffolding protein TERM 2872 2134355 - 2134367 + g 73 -6.9 -4.28548 | AAAAAGCCCTGGCTT CTCGC TCT GCGGG TTTTCATCAATAAAT TERM 2873 2135427 - 2135414 - g 77 -5.3 -4.99035 | TCAGCCAGAGAAAAA CTTCT TTTC AGAAG AACAAATTGAAAAAC PMI1992 2135046 - 2136800 + | phage terminase, ATPase subunit PMI1993 2136800 - 2137828 + | phage portal protein TERM 2874 2137849 - 2137868 + T 100 -10 -5.1287 | opp_overlap 2137849 CCACACAAAGAACAA TACCGCCG ACAC TGGCGGTA TTTTTTACCTGTAAG TERM 2875 2137868 - 2137849 - T 88 -9.3 -4.18983 | opp_overlap 2137849 CCACACAAAGAACAA TACCGCC GACACT GGCGGTA TTTTTTACCTGTAAG TERM 2876 2137948 - 2137965 + T 71 -5.5 -4.64766 | opp_overlap 2137951, overlap 2137951 CCGTTTACACCCTGA TAAGGCG AATC CGCCTAA TTTTTACCCTCTCAA TERM 2877 2138139 - 2138113 - T 82 -8.6 -4.09739 | TTAACCCCCTCAAAA CGCAATCGTGAC CCC GCCACGCCCGCG CACTAAATAGACCGC TERM 2878 2138433 - 2138380 - T 81 -10.6 -2.81786 | gap 1, opp_overlap 2138393, overlap 2138376 2138393 GACACTCAATATAAG GCACTTAAAAAAATCTCCGC-AGTT TATTC AACTAGCGGAGATTTTTATTAACGC TAAAGTTAGTTACAA TERM 2879 2138393 - 2138420 + T 95 -9.3 -5.07486 | gap 1, opp_overlap 2138393 2138380 AGGCACTTAAAAAAA TCTCCGC-AGTT TATTC AACTAGCGGAGA TTTTTATTAACGCTA TERM 2880 2138420 - 2138393 - T 100 -9.3 -5.47821 | gap 1, opp_overlap 2138393, overlap 2138380 AGGCACTTAAAAAAA TCTCCGC-AGTT TATTC AACTAGCGGAGA TTTTTATTAACGCTA PMI1994 2139566 - 2138439 - | transcriptional regulator TERM 2881 2138659 - 2138643 - G 80 -2.2 -5.67063 | TGCATTATAAAAAAA CTCAGG TTTTT CATGAG GTATTAAACAGTCCT PMI1995 2140170 - 2139577 - | hypothetical protein PMI1996 2140493 - 2140281 - | hypothetical protein PMI1997 2142864 - 2140486 - | phage replication protein TERM 2882 2140962 - 2140976 + g 87 -8.5 -4.62069 | TGACAGGACTCCGAG GCGCG CTGAT CGCGC TTTTTAAAGTCAAAA TERM 2883 2141809 - 2141821 + g 70 -2.7 -5.00846 | overlap 2141798 CCATTTCTCGTTAAT GAGAA CTT TTTTC TTTTTCTCATCTTTA TERM 2884 2141972 - 2141994 + g 81 -7 -4.75174 | overlap 2141975 ATACGGCGAATTTTA GGGTTAGCGA TAC TCGCTAATAC TTTTTCCATTAAATC TERM 2885 2141975 - 2141991 + g 75 -9.5 -3.28592 | overlap 2141972 CGGCGAATTTTAGGG TTAGCGA TAC TCGCTAA TACTTTTTCCATTAA TERM 2886 2142715 - 2142755 + g 90 -12.6 -3.72893 | opp_overlap 2142717 2142718, overlap 2142717 2142718 TTCAATATCGAATAA AATCGCTTGCCCCTGAGC CAATT GCTCACGGGTAAGCGGTC TTTCATAAACAACTG TERM 2887 2142753 - 2142717 - G 93 -10.8 -4.71776 | opp_overlap 2142717 2142715 2142718, overlap 2142718 CAATATCGAATAAAA TCGCTTGCCCCTGAGC CAATT GCTCACGGGTAAGCGG TCTTTCATAAACAAC TERM 2888 2142717 - 2142753 + g 100 -15.2 -3.44848 | opp_overlap 2142717 2142718, overlap 2142715 2142718 CAATATCGAATAAAA TCGCTTGCCCCTGAGC CAATT GCTCACGGGTAAGCGG TCTTTCATAAACAAC TERM 2889 2142718 - 2142752 + g 100 -16.5 -2.66695 | opp_overlap 2142717 2142718, overlap 2142717 2142715 AATATCGAATAAAAT CGCTTGCCCCTGAGC CAATT GCTCACGGGTAAGCG GTCTTTCATAAACAA TERM 2890 2142752 - 2142718 - G 100 -14.3 -3.41981 | opp_overlap 2142718 2142717 2142715, overlap 2142717 AATATCGAATAAAAT CGCTTGCCCCTGAGC CAATT GCTCACGGGTAAGCG GTCTTTCATAAACAA PMI1998 2143187 - 2142864 - | hypothetical protein PMI1999 2144011 - 2143187 - | DNA adenine methylase TERM 2891 2143985 - 2143998 + g 74 -5.3 -4.6635 | overlap 2143969 GGCTTTTGAGCCAGC CCATT TCAG AATGG TTTTATTCGCCATTT PMI2000 2144234 - 2144013 - | phage protein PMI2001 2144484 - 2144227 - | phage protein TERM 2892 2144468 - 2144483 + g 72 -3.3 -5.0666 | opp_overlap 2144466 2144475, overlap 2144466 2144475 AAATATAAAAAGTCC TGACA AATAAA TGTCA TTTATTTTTTAGGTG TERM 2893 2144475 - 2144487 + g 72 -3.5 -5.13473 | opp_overlap 2144466 2144475, overlap 2144468 2144466 AAAAGTCCTGACAAA TAAAT GTC ATTTA TTTTTTAGGTGTAAT PMI2002 2144897 - 2144502 - | hypothetical protein PMI2003 2145055 - 2144906 - | hypothetical protein PMI2004 2145249 - 2145052 - | hypothetical protein PMI2005 2145530 - 2145255 - | phage Cox regulatory protein TERM 2894 2145568 - 2145549 - H 74 -9.2 -3.15579 | opp_overlap 2145550 2145561, overlap 2145552 GTAACCTCTTATTAA TGAGCGCC CTTT GGCGCTCT TTTACGCCTTGTAGC TERM 2895 2145550 - 2145567 + H 100 -12.7 -4.1585 | opp_overlap 2145549 2145552, overlap 2145561 TAACCTCTTATTAAT GAGCGCC CTTT GGCGCTC TTTTACGCCTTGTAG TERM 2896 2145565 - 2145552 - H 74 -9.5 -2.78018 | opp_overlap 2145550 2145561, overlap 2145549 ACCTCTTATTAATGA GCGCC CTTT GGCGC TCTTTTACGCCTTGT PMI2006 2145633 - 2145932 + | phage repressor protein C TERM 2897 2146385 - 2146397 + G 71 -4.9 -4.48823 | TCGAGAACTGTATGC TATAC GAG GTATA TTTTCTCAATTAATT PMI2007 2145999 - 2146982 + | phage integrase TERM 2898 2147017 - 2147000 - T 86 -11.3 -2.89323 | opp_overlap 2147000 AAAATTGTCCACAGA GCGACCA CACT TGGTCGC TTTTCATCATTTTTT TERM 2899 2147000 - 2147017 + T 100 -11.3 -4.46432 | opp_overlap 2147000 AAAATTGTCCACAGA GCGACCA CACT TGGTCGC TTTTCATCATTTTTT TERM 2900 2147122 - 2147093 - T 87 -10.9 -3.54177 | opp_overlap 2147100, overlap 2147100 CTGAAAATTAAGCAA TAAAAAAGCCATC TTGC GATGGCTTTTTTC ATATAGCGTATTTAT TERM 2901 2147115 - 2147100 - T 100 -9 -5.5604 | opp_overlap 2147100, overlap 2147093 TTAAGCAATAAAAAA GCCATC TTGC GATGGC TTTTTTCATATAGCG TERM 2902 2147100 - 2147115 + T 95 -9 -5.21709 | opp_overlap 2147100 2147093 TTAAGCAATAAAAAA GCCATC TTGC GATGGC TTTTTTCATATAGCG lysS 2148665 - 2147151 - | lysyl-tRNA synthetase prfB 2149772 - 2148674 - | peptide chain release factor 2 recJ 2151677 - 2149944 - | single-stranded-DNA-specific exonuclease dsbC 2152394 - 2151687 - | thiol:disulfide interchange protein TERM 2903 2152243 - 2152226 - G 76 -2 -5.49569 | CAGTAATATAAAAAA TGCCTT TATCAG AAAGCA CTGCATTTAAACCCA xerD 2153369 - 2152428 - | tyrosine recombinase fldB 2153477 - 2153995 + | flavodoxin 2 PMI2014 2154503 - 2154096 - | hypothetical protein PMI2015 2154732 - 2154538 - | hypothetical protein TERM 2904 2154714 - 2154754 + g 85 -11.3 -3.27476 | opp_overlap 2154720, overlap 2154715 2154717 TTCGTTTTTTACTTA CTAAAACGCCCTTATTCAT TTA ATGAATAAGGGCGTGATAC TTAGTACTTCAGGCT TERM 2905 2154715 - 2154753 + g 95 -14.8 -2.56164 | opp_overlap 2154720, overlap 2154714 2154717 TCGTTTTTTACTTAC TAAAACGCCCTTATTCAT TTA ATGAATAAGGGCGTGATA CTTAGTACTTCAGGC TERM 2906 2154717 - 2154751 + g 90 -13 -2.81815 | opp_overlap 2154720, overlap 2154715 2154714 GTTTTTTACTTACTA AAACGCCCTTATTCAT TTA ATGAATAAGGGCGTGA TACTTAGTACTTCAG TERM 2907 2154748 - 2154720 - G 100 -19.1 -4.2828 | opp_overlap 2154717 2154715 2154714 TTTTACTTACTAAAA CGCCCTTATTCAT TTA ATGAATAAGGGCG TGATACTTAGTACTT PMI2016 2155092 - 2154811 - | hypothetical protein PMI2017 2155347 - 2156333 + | aminomethyltransferase TERM 2908 2156378 - 2156392 + G 85 -9.2 -4.14243 | opp_overlap 2156378 2156377 ACACAACAAACTAAT GGGGCT TTT GGCCCC TTTTCAGATACCATC TERM 2909 2156504 - 2156526 + G 71 -6.2 -4.1585 | overlap 2156494 2156508 GCTGAGCATAGTTGG CACTTTGCTG TTG CAGCAATGAG TTTTCAACCTTATGC PMI2018 2156360 - 2156962 + | metal dependent phosphohydrolase TERM 2910 2156992 - 2157034 + T 100 -13 -3.78953 | opp_overlap 2156963 2156997, overlap 2156997 TTTGATGATGACCAA AAAAATACCGAAGGTAGATT TTG AATTTACCCTCGGTATTTTA TTTAGTAATAGCGCT TERM 2911 2156997 - 2157029 + T 100 -12.9 -4.95484 | opp_overlap 2156997, overlap 2156992 TGATGACCAAAAAAA TACCGAAGGTAGATT TTG AATTTACCCTCGGTA TTTTATTTAGTAATA TERM 2912 2157029 - 2156997 - T 100 -12.9 -5.55664 | opp_overlap 2156992 2156997 TGATGACCAAAAAAA TACCGAAGGTAGATT TTG AATTTACCCTCGGTA TTTTATTTAGTAATA gcvP 2159936 - 2157060 - | glycine dehydrogenase [decarboxylating] (glycine cleavage system P-protein) TERM 2913 2160012 - 2160037 + r 73 -4.5 -4.95618 | opp_overlap 2160012 GCTGATAAATAAAAA CGCCCCGACTT TTTA ATGACGAGGCG TTTATTTTTACTCTT TERM 2914 2160037 - 2160012 - R 93 -6.7 -5.38054 | opp_overlap 2160012 GCTGATAAATAAAAA CGCCCCGACTT TTTA ATGACGAGGCG TTTATTTTTACTCTT gcvH 2160437 - 2160045 - | glycine cleavage system H protein gcvT 2161564 - 2160470 - | aminomethyltransferase (glycine cleavage system T protein) visC 2163213 - 2161978 - | monooxygenase ubiH 2164415 - 2163243 - | 2-octaprenyl-6-methoxyphenol hydroxylase pepP 2165739 - 2164429 - | Xaa-proline aminopeptidase PMI2025 2166377 - 2165793 - | hypothetical protein PMI2026 2166554 - 2166883 + | hypothetical protein TERM 2915 2166987 - 2166972 - f 80 -9 -3.59966 | overlap 2166969 ATAGTTCATAGATAA GGTGCT TAAC AGCACC CACCTAATTTCTCTG TERM 2916 2167186 - 2167228 + F 100 -8.7 -6.11392 | opp_overlap 2167186 GAGACCCCAATTCAA GTTCTAAACACTGAGTACT GATTA AGTATTTAATGTTTAGAGC TTTTTTTATTTCTTT PMI2027 2167349 - 2167966 + | 5-formyltetrahydrofolate cyclo ligase TERM 2917 2168973 - 2168963 - g 83 -3.2 -5.63645 | overlap 2168956 CTAAAATAGAAAAAA CCGT ACA ACAG CTTTATCAATATTCA PMI2028 2168056 - 2170128 + | toxin transporter TERM 2918 2170746 - 2170726 - g 71 -6.3 -4.258 | TTACTCACCAAGAAA TCAATTCAT TAA ATGAATTAA AAAACAATATTGAAA TERM 2919 2170957 - 2170947 - g 83 -3.2 -5.69262 | TTAGAAAAACAAAAA CACC TAG AGTG GCATGACAAATTTAA PMI2029 2170131 - 2171495 + | HlyD-family toxin secretion protein PMI2030 2171509 - 2173632 + | toxin transporter TERM 2920 2173660 - 2173685 + T 73 -9.1 -2.84723 | opp_overlap 2173660, overlap 2173664 AATGAACCATAAAAA TAAAGGCTCTA ATTA TTGAGCCTTTA TACTTAATATTAAAA TERM 2921 2173685 - 2173660 - T 95 -9.1 -5.00765 | opp_overlap 2173660 2173664 AATGAACCATAAAAA TAAAGGCTCTA ATTA TTGAGCCTTTA TACTTAATATTAAAA serA 2174959 - 2173709 - | D-3-phosphoglycerate dehydrogenase TERM 2922 2175267 - 2175234 - R 100 -11.8 -4.79451 | opp_overlap 2175234 AGGGGAAAGATAAAA GAGAGTGGGAAAAC AATATA GTTCACCCACTCTC TTTAGACGATACTGT TERM 2923 2175234 - 2175267 + r 80 -9.6 -3.5627 | opp_overlap 2175234 AGGGGAAAGATAAAA GAGAGTGGGAAAAC AATATA GTTCACCCACTCTC TTTAGACGATACTGT rpiA 2175973 - 2175317 - | ribose 5-phosphate isomerase A iciA 2176134 - 2177033 + | chromosome initiation inhibitor (LysR-family transcriptional regulator) PMI2034 2177236 - 2177457 + | hypothetical protein PMI2035 2177477 - 2177953 + | hypothetical protein TERM 2924 2178102 - 2178067 - T 83 -10.6 -3.21276 | opp_overlap 2178069, overlap 2178065 2178069 TCCTGCGCTATAACA TAGATGTATCAGCTCA CTGC TGAGCCAATACATCTT ATCCTTTGATGGTAA TERM 2925 2178100 - 2178069 - T 100 -13.2 -3.17146 | opp_overlap 2178069, overlap 2178067 2178065 CTGCGCTATAACATA GATGTATCAGCTCA CTGC TGAGCCAATACATC TTATCCTTTGATGGT TERM 2926 2178069 - 2178100 + T 77 -8.8 -3.63251 | opp_overlap 2178069 2178067 2178065 CTGCGCTATAACATA GATGTATCAGCTCA CTGC TGAGCCAATACATC TTATCCTTTGATGGT PMI2036 2178855 - 2178121 - | hypothetical protein argO 2179569 - 2178946 - | arginine exporter TERM 2927 2179568 - 2179558 - G 74 -4 -5.03747 | AAACCCCTGAAAAAA TGTT GTT AACA TGCAAAATATCCTAA TERM 2928 2179710 - 2179688 - R 84 -6.3 -5.26119 | opp_overlap 2179690 GCGGTAAAAATAAAA GAGCCAC GCTTAATCG GTGGCTC TTGAGATGTGTTTTA PMI2038 2180598 - 2179738 - | mechanosensitive ion channel protein PMI2039 2181061 - 2180690 - | hypothetical protein TERM 2929 2181159 - 2181141 - R 100 -14.6 -6.04419 | opp_overlap 2181141 AAAATAACAAAAAAA CAGGAGGC ATT GCCTCCTG TTTCAGACTGCTGAA TERM 2930 2181141 - 2181159 + r 100 -14.6 -3.58343 | opp_overlap 2181141 AAAATAACAAAAAAA CAGGAGGC ATT GCCTCCTG TTTCAGACTGCTGAA acnB 2183829 - 2181232 - | aconitate hydratase 2 (citrate hydro-lyase 2) TERM 2931 2183205 - 2183218 + g 76 -4.5 -5.05782 | GTTGGTCGGGTTCAA TGCCT TCGC GGGCA TTTTTTAGCATAGCT TERM 2932 2183319 - 2183333 + g 81 -5.6 -5.01732 | opp_overlap 2183320, overlap 2183320 CCCCCGTCACTTTAA ACACGG TTA CCGTGA TTTTTTCAGCAAGTT TERM 2933 2183320 - 2183332 + g 74 -9.1 -3.60316 | opp_overlap 2183320, overlap 2183319 CCCCGTCACTTTAAA CACGG TTA CCGTG ATTTTTTCAGCAAGT TERM 2934 2183332 - 2183320 - G 74 -9.1 -3.59979 | opp_overlap 2183319 2183320 CCCCGTCACTTTAAA CACGG TTA CCGTG ATTTTTTCAGCAAGT TERM 2935 2183666 - 2183633 - G 74 -3.9 -5.02476 | gap 1, opp_overlap 2183621, overlap 2183649 AGAGCCGTTAAAAAA CCGGCTTTAACATAAG CGG CTT-CATCAACGCCGG GTGGAACACGGTTAA TERM 2936 2189780 - 2189756 - g 75 -2.8 -5.26316 | TGATGCGACAAAAAA TGCCCTCGCT GACAA AAAGAAGGCA GATGCCAATCGTCAA TERM 2937 2189961 - 2189942 - g 79 -9.4 -3.70722 | TTCAGTAACACACAA TTTGACCA CAGT TGGTCAAA CACTGGAAGTACTCA TERM 2938 2190319 - 2190297 - g 91 -6.2 -5.37043 | ATGGCAGAGAAAAAA GCATCAACCA TGG TGGAAGATGC GAGATCACGAGGAGA TERM 2939 2192974 - 2192947 - g 100 -5 -5.70522 | AAGAACAACAAAAAA TAATGAGTAATT TTAT ACTCACTCATTA TCGTGATTTTGACTC TERM 2940 2196992 - 2196980 - g 74 -6.3 -4.47052 | ACTAAACAAAAAATA TAACC AGT GGTTA GGTGGTAGTGGCAAT TERM 2941 2197039 - 2197027 - g 82 -7.7 -4.65168 | ACGAGATGGGAAAAA TCAGC CGA GCTGA GCAACTTCGTCAACT TERM 2942 2197223 - 2197235 + G 83 -9.1 -3.9941 | TACAGCAACTGGTAT GGTGG AAA CCACC TTTACTTATACCCCC PMI2043 2185083 - 2198945 + | toxin TERM 2943 2199121 - 2199095 - T 100 -16 -5.33848 | opp_overlap 2199097 ATCATAATGAAAAAA GAGCCAAGCTCA TAA TGAACTTGGCTC TTAACATTTACACTT TERM 2944 2199097 - 2199119 + T 83 -10.6 -3.12668 | opp_overlap 2199095 CATAATGAAAAAAGA GCCAAGCTCA TAA TGAACTTGGC TCTTAACATTTACAC lpdA 2200585 - 2199158 - | dihydrolipoyl dehydrogenase (glycine cleavage system L protein) TERM 2945 2199353 - 2199372 + g 71 -4.9 -4.55295 | AGAGCCGACAATTGC CCCACCG ATAACA CGGTTGG TTTCTTTGTCAAAAA TERM 2946 2200761 - 2200777 + r 80 -9.3 -3.71794 | opp_overlap 2200761 CGGCAATCAGAGAAA CCGGCGC TTA GCACCGG TTTAGATGATTACAT TERM 2947 2200777 - 2200761 - R 100 -11.5 -4.1347 | opp_overlap 2200761 CGGCAATCAGAGAAA CCGGCGC TTA GCACCGG TTTAGATGATTACAT aceF 2202652 - 2200787 - | dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex TERM 2948 2202402 - 2202421 + g 70 -9.2 -3.1247 | overlap 2202404 GGAGCGGCTTCTTGA GCGGGTGC CTGA GCACCCTC TTCAGTATCAAAGAT TERM 2949 2202404 - 2202419 + g 75 -10.4 -3.12327 | overlap 2202402 AGCGGCTTCTTGAGC GGGTGC CTGA GCACCC TCTTCAGTATCAAAG TERM 2950 2202462 - 2202477 + g 70 -5.4 -4.46493 | GAGCCAGTTTCGACT TTGTCG CCCA CGGCAA TTTTGATCTCTTTAA aceE 2205331 - 2202665 - | pyruvate dehydrogenase E1 component TERM 2951 2205367 - 2205425 + r 93 -11.4 -3.63515 | gap 3, opp_overlap 2205374, overlap 2205368 2205372 TCTGTTTCTAATGGT TA-TAGGAGCCTATCTTCCCGTGATA-CC ACGG GGATATGACGGGAAGATAGGC-CCTGCTG TTATTACCGCTACCC TERM 2952 2205368 - 2205423 + r 100 -14.3 -3.39784 | opp_overlap 2205374, overlap 2205367 2205372 CTGTTTCTAATGGTT ATAGGAGCCTATCTTCCCGTGATA-CC ACGG GGATATGACGGGAAGATAGGC-CCTGC TGTTATTACCGCTAC TERM 2953 2205372 - 2205420 + r 100 -18.4 -2.85545 | gap 1, opp_overlap 2205374, overlap 2205368 2205367 TTCTAATGGTTATAG GAGCCTATCTTCCCGTGATA-CC ACGG GGATATGACGGGAAGATAGGCCC TGCTGTTATTACCGC TERM 2954 2205418 - 2205374 - R 100 -21 -2.63631 | opp_overlap 2205372 2205368 2205367 CTAATGGTTATAGGA GCCTATCTTCCCGTGATACC ACGGG GATATGACGGGAAGATAGGC CCTGCTGTTATTACC pdhR 2206265 - 2205495 - | pyruvate dehydrogenase complex repressor (GntR-family transcriptional regulator) TERM 2955 2206535 - 2206514 - R 70 -6.5 -4.29493 | overlap 2206516 GATTAAACACATAAA CAGTCACAC TGAA GCGTGACAG CATTCATATATTGAT TERM 2956 2206533 - 2206516 - R 73 -7.7 -3.73323 | overlap 2206514 TTAAACACATAAACA GTCACAC TGAA GCGTGAC AGCATTCATATATTG ampD 2207134 - 2206592 - | N-acetylmuramoyl-L-alanine amidase ppdD 2207345 - 2207788 + | prelipin peptidase dependent protein D TERM 2957 2208801 - 2208822 + G 71 -3.7 -4.89477 | opp_overlap 2208793 AATTATATTACCCAA TTGGCAAGC AACA GGTTGTCAA TTTTGTTATTCCGGC hofB 2207887 - 2208990 + | protein transport protein hofC 2208987 - 2210186 + | protein transport protein coaE 2210464 - 2211078 + | dephospho-CoA kinase PMI2053 2211081 - 2211833 + | hypothetical protein TERM 2958 2211939 - 2211962 + G 75 -2.5 -5.18726 | gap 1 AACCGAGGTAATATG GGATGA-AAG TAGCC CTTATCGTCC TTTTTGTTGTAAGCG PMI2054 2211886 - 2212101 + | hypothetical protein TERM 2959 2212114 - 2212156 + T 74 -5.7 -4.62069 | gap 1, opp_overlap 2212114 2212124, overlap 2212117 2212120 TAAACGCCCACAGCA TACTCA-TACAGCCACAACA ATCA TGAAGTGGCTGTATTGATTA TTTTTGCAATAAGGC TERM 2960 2212117 - 2212153 + T 79 -7.4 -4.42748 | gap 1, opp_overlap 2212114 2212124, overlap 2212114 2212120 ACGCCCACAGCATAC TCA-TACAGCCACAACA ATCA TGAAGTGGCTGTATTGA TTATTTTTGCAATAA TERM 2961 2212120 - 2212149 + T 80 -9.3 -3.74868 | opp_overlap 2212114 2212124, overlap 2212117 2212114 CCCACAGCATACTCA TACAGCCACAACA ATCA TGAAGTGGCTGTA TTGATTATTTTTGCA mutT 2212549 - 2212154 - | mutator MutT protein (dGTP pyrophosphohydrolase) TERM 2962 2213411 - 2213399 - g 71 -4.1 -4.91285 | ATTAATAGAACAAAA TCGCT ATC AGCAA CTGCAAGAAAAAGCG hpmB 2213247 - 2214932 + | hemolysin activator protein (two-partner secretion system accessory protein) TERM 2963 2216171 - 2216159 - g 71 -4.9 -4.63184 | overlap 2216162 AATTGATGCTAAAAA TAATG CGA CATTA ACCGCAACTAAAGGA TERM 2964 2218077 - 2218064 - g 79 -6.7 -4.50159 | opp_overlap 2218063, overlap 2218047 2218075 CTTAATGGAAACAAA GGCTA AAGG TAGCC AATTTACCTCAAATG TERM 2965 2218569 - 2218546 - g 76 -2.4 -5.40072 | opp_overlap 2218559, overlap 2218549 GTTTTGGTAAAAAAA TGACCGATGA TGCT TCATCTGTGA ATGGTTTAGGTAGTG TERM 2966 2219151 - 2219140 - g 83 -7.2 -4.72029 | GCCAAGTGAATAAAA CGGC TAAA GCCG GAGGGTCATTATTAG hpmA 2214966 - 2219699 + | hemolysin TERM 2967 2219744 - 2219774 + F 80 -5.5 -5.18726 | gap 1, opp_overlap 2219744 TTTTTTGTAAGCTAA GCCCACTTGATTGT CATT ATTA-CAAGTGGGC TTTTTATTATCACAC PMI2060 2222564 - 2222971 + | MerR-family transcriptional regulator TERM 2968 2223034 - 2223069 + T 93 -9.8 -4.63928 | opp_overlap 2223040, overlap 2223040 2223067 TTTTTATCCATGATA AAAAAAGCCCACCTTT ATTC GAAGGTGGGCTTTCTA TTTTTAAAATGGTGT TERM 2969 2223040 - 2223063 + T 100 -13.2 -4.55887 | opp_overlap 2223040, overlap 2223034 TCCATGATAAAAAAA GCCCACCTTT ATTC GAAGGTGGGC TTTCTATTTTTAAAA TERM 2970 2223063 - 2223040 - T 100 -12.5 -5.67063 | opp_overlap 2223040 2223034 TCCATGATAAAAAAA GCCCACCTT TATTCG AAGGTGGGC TTTCTATTTTTAAAA secA 2225826 - 2223118 - | preprotein translocase SecA subunit secM 2226461 - 2225934 - | secretion monitor protein TERM 2971 2226115 - 2226140 + g 73 -6.9 -4.15453 | overlap 2226124 2226128 ACCTCAGCAACATTC GCAACAGGTGA TGGC TCATCTTTTGC TTTTACCATCAATTC TERM 2972 2226124 - 2226134 + g 75 -5.4 -4.67641 | overlap 2226115 2226128 ACATTCGCAACAGGT GATG GCT CATC TTTTGCTTTTACCAT TERM 2973 2226128 - 2226186 + g 100 -20.1 -2.79291 | gap 1, overlap 2226124 2226115 TCGCAACAGGTGATG GCTCATCTTTTGCTTTTACCATCAATTC AGGT GAATGAATGGTAAAAGCAAAAGA-GAGC TGCTTAATCACATTT PMI2063 2226505 - 2227023 + | hypothetical protein lpxC 2227971 - 2227054 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 2974 2227084 - 2227094 + g 76 -6.8 -4.31688 | opp_overlap 2227084 CGATGGCGCTTTAAA TGCC ACT GGCA TTTTCGCTTCGTCTT TERM 2975 2228035 - 2227989 - R 76 -9.6 -3.03124 | opp_overlap 2227993, overlap 2227992 TTTTATCTCGCAATA TTATCCGTCCTACCAATTATTA TAC TTATAATTGGCAGGACAGTTTA GCACAAAAAGCGGAG TERM 2976 2228032 - 2227992 - R 86 -11.3 -2.74192 | opp_overlap 2227993, overlap 2227989 TATCTCGCAATATTA TCCGTCCTACCAATTATTA TAC TTATAATTGGCAGGACAGT TTAGCACAAAAAGCG TERM 2977 2227993 - 2228031 + r 85 -10.4 -3.53012 | opp_overlap 2227992 2227989 ATCTCGCAATATTAT CCGTCCTACCAATTATTA TAC TTATAATTGGCAGGACAG TTTAGCACAAAAAGC ftsZ 2229236 - 2228070 - | cell division protein ftsA 2230562 - 2229306 - | cell division protein TERM 2978 2230263 - 2230287 + g 79 -8.7 -4.10161 | opp_overlap 2230268, overlap 2230268 2230286 TGTTACTTCTTCTTC TGAAATTGGCA CCA TACCAATTTCA TTTTGGCAGCTAATA ftsQ 2231396 - 2230608 - | cell division protein TERM 2979 2231023 - 2231035 + g 70 -3.4 -4.91873 | overlap 2231025 GTAAATGGCACATAC TCCA CCAGA TGGA TTTTTAATTCGTCTG PMI2068 2231755 - 2231408 - | hypothetical protein murC 2233224 - 2231761 - | UDP-N-acetylmuramate--L-alanine ligase murG 2234348 - 2233266 - | UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 2980 2233521 - 2233505 - G 80 -4.4 -5.28166 | gap 1, overlap 2233507 GAAAAGGAACAAAAA TAGCGGG TAAC CCCGC-A GCGGCAATCTCGCTA TERM 2981 2233520 - 2233507 - G 89 -9.5 -4.23353 | overlap 2233505 AAAGGAACAAAAATA GCGGG TAAC CCCGC AGCGGCAATCTCGCT TERM 2982 2234386 - 2234366 - R 74 -7.6 -3.87075 | gap 1, opp_overlap 2234366 AGGACTCCTTACAAA CGCCTGAGC CTGT GCT-AGGCG TGATTCATAATCAAT ftsW 2235538 - 2234345 - | cell division protein murD 2236848 - 2235538 - | UDP-N-acetylmuramoylalanine-D-glutamate ligase mraY 2237932 - 2236850 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 2983 2237429 - 2237411 - G 76 -8.9 -3.70033 | CAGTAAGATATACAA CATGCCA AGTTG TGGCATG ACATCTTTAAAGAAA murF 2239308 - 2237926 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase murE 2240792 - 2239305 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diami nopimelate ligase ftsI 2242575 - 2240779 - | penicillin-binding protein (peptidoglycan synthetase protein) TERM 2984 2241365 - 2241387 + g 79 -8.5 -4.07568 | ATGCCACTACTTTCA CCAACTAGC CCCAA GTTAGTTGG TTTTCCGAGGCCAAA TERM 2985 2242370 - 2242402 + g 70 -9.2 -3.26545 | opp_overlap 2242369 2242367 2242370 TGCACACGTAAAGAG CGCAGATCCCCT TCGCGGATC AGGGGATCTGGG TTAATAATCTGTAAA ftsL 2242904 - 2242587 - | cell division protein mraW 2243852 - 2242905 - | S-adenosyl-methyltransferase TERM 2986 2243011 - 2243024 + g 73 -6.7 -4.26832 | ATACTACTCAGGCGA GCACT TCCT AGTGC TTTAATTTGTTCTTC mraZ 2244314 - 2243856 - | hypothetical protein TERM 2987 2244927 - 2244966 + r 85 -10.9 -3.30441 | opp_overlap 2244930, overlap 2244930 ATTATTTAACCAAAT AAACTATCCCTGCTTTA ATTTAA TAAAGCAGGGATAGTCA TTATAAAAAATGCTG TERM 2988 2244963 - 2244930 - R 100 -17 -4.57304 | opp_overlap 2244930 2244927 ATTTAACCAAATAAA CTATCCCTGCTTTA ATTTAA TAAAGCAGGGATAG TCATTATAAAAAATG TERM 2989 2244930 - 2244963 + r 100 -17 -2.8294 | opp_overlap 2244930, overlap 2244927 ATTTAACCAAATAAA CTATCCCTGCTTTA ATTTAA TAAAGCAGGGATAG TCATTATAAAAAATG fruR 2246009 - 2245002 - | fructose repressor (catabolite repressor/activator) (LacI-family transcriptional regulator) TERM 2990 2246194 - 2246222 + r 83 -11.2 -2.82516 | opp_overlap 2246201, overlap 2246201 TTACCTAAAGTGCAA TAAAAAAGCACC TTTAC GGTGCTTTTTTG TCTGGTGATCACGAC TERM 2991 2246201 - 2246215 + r 100 -7.1 -5.39721 | opp_overlap 2246201, overlap 2246194 AAGTGCAATAAAAAA GCACC TTTAC GGTGC TTTTTTGTCTGGTGA TERM 2992 2246215 - 2246201 - R 100 -7.1 -5.4756 | opp_overlap 2246201 2246194 AAGTGCAATAAAAAA GCACC TTTAC GGTGC TTTTTTGTCTGGTGA PMI2081 2248039 - 2246231 - | AMP-binding protein TERM 2993 2247710 - 2247697 - G 74 -3.9 -5.1356 | overlap 2247668 2247700 GGTCACCAACAAAAA GAATA CGAA TATTC GCATCGTTGATGATA TERM 2994 2248556 - 2248568 + r 73 -7.7 -3.66908 | opp_overlap 2248555, overlap 2248552 TAGAGTGCTAATTAT GAGTG AAT CACTC TTAGTTTTGACAAAC leuO 2249513 - 2248569 - | LysR-family transcriptional regulator TERM 2995 2249710 - 2249683 - H 71 -2.2 -5.34055 | gap 1, opp_overlap 2249686, overlap 2249686 2249690 2249708 ACAAACACCAAAAAA TAATTCATCTTTA TAT TAAAGA-GAATAA ATTGACATTTAAATT TERM 2996 2249817 - 2249802 - g 83 -4.8 -5.33124 | AATAATAAAACAAAA TATGAT AAAA ATCATA ATAAAATAATAAAAT PMI2083 2249712 - 2249957 + | hypothetical protein TERM 2997 2250322 - 2250338 + F 100 -10.8 -5.64274 | opp_overlap 2250322 ACCCTTAGAGAAAAA CCCGCG CTAAT CGCGGG TTTTTTTATACCTGG TERM 2998 2250338 - 2250322 - f 100 -10.8 -4.9725 | opp_overlap 2250322 ACCCTTAGAGAAAAA CCCGCG CTAAT CGCGGG TTTTTTTATACCTGG TERM 2999 2250546 - 2250556 + G 73 -6.8 -4.26188 | GGTTTTCCTGTCTCT TCCC CTG GGGA TTTTGAATCTGTACA TERM 3000 2251687 - 2251659 - g 73 -9.6 -3.18869 | opp_overlap 2251659, overlap 2251651 2251666 GAAGAAATCACTGAA GCAGCAACAGGA AATGG TCCCGTTGATGC TGTCTATCAAGCTAT leuA 2250396 - 2251955 + | 2-isopropylmalate synthase leuB 2251961 - 2253052 + | 3-isopropylmalate dehydrogenase leuC 2253054 - 2254463 + | 3-isopropylmalate dehydratase large subunit TERM 3001 2254881 - 2254856 - g 70 -9.1 -3.2327 | overlap 2254849 TTAAGTGATGAGCAA GTTACCCAGTT ATTT AATTGGGTAAC AGAGCATGCTGGTAC leuD 2254475 - 2255077 + | 3-isopropylmalate dehydratase small subunit TERM 3002 2255212 - 2255190 - f 100 -9.2 -5.61689 | AAAACGAACAAAAAA GCCAGTGA ACTATTA TCACTGGC CGGTAATCACCGCAT PMI2088 2255359 - 2257038 + | solute-binding protein mutH 2257641 - 2258318 + | DNA mismatch repair protein TERM 3003 2258331 - 2258378 + T 80 -5.6 -5.1861 | opp_overlap 2258338, overlap 2258333 2258336 TAATGCGTTACAGTA AACAAAATGCCCCGAGTTAT CTTAGTGA ATAACTCGGGGCACATCGTA TTTTTTGCTGGTAAA TERM 3004 2258333 - 2258376 + T 83 -8.2 -4.22314 | opp_overlap 2258338, overlap 2258331 2258336 ATGCGTTACAGTAAA CAAAATGCCCCGAGTTAT CTTAGTGA ATAACTCGGGGCACATCG TATTTTTTGCTGGTA TERM 3005 2258336 - 2258373 + T 72 -8.5 -3.10583 | opp_overlap 2258338, overlap 2258333 2258331 CGTTACAGTAAACAA AATGCCCCGAGTTAT CTTAGTGA ATAACTCGGGGCACA TCGTATTTTTTGCTG TERM 3006 2258371 - 2258338 - T 100 -16.2 -4.97158 | opp_overlap 2258336 2258333 2258331 TTACAGTAAACAAAA TGCCCCGAGTTATC TTAGTG AATAACTCGGGGCA CATCGTATTTTTTGC PMI2090 2258741 - 2258397 - | DNA-binding prophage protein PMI2091 2259072 - 2258731 - | hypothetical protein TERM 3007 2259221 - 2259188 - R 100 -16.2 -5.69473 | CATATCATAAAAAAA TGCCCCGAGTTATC TTAGTG AATAACTCGGGGCA CAAATAACAATTATG budC 2260032 - 2259253 - | acetoin(diacetyl) reductase TERM 3008 2260337 - 2260308 - R 100 -10.9 -4.91712 | opp_overlap 2260306 2260305 2260302, overlap 2260311 TTTAATGGATAAAAA TAAGGCAATATCT AAAT AGATATTGCCTTG ACATTATTTATGACA TERM 3009 2260334 - 2260311 - R 100 -12.6 -4.55383 | opp_overlap 2260306 2260305 2260302, overlap 2260308 AATGGATAAAAATAA GGCAATATCT AAAT AGATATTGCC TTGACATTATTTATG speB 2261282 - 2260362 - | Agmatinase TERM 3010 2261362 - 2261341 - R 90 -9.5 -4.16904 | opp_overlap 2261341 AATATGATAGATAAA GAGTGATGT ATCA ACACCACTC TGCATTAGGAAGTAA speA 2263288 - 2261381 - | biosynthetic arginine decarboxylase TERM 3011 2263697 - 2263681 - H 76 -7.3 -4.2074 | opp_overlap 2263687, overlap 2263661 2263660 TCCCTAACAGAGAAA CAGGATC AGC AATCCTG CGGTTTACACTGTGA TERM 3012 2263835 - 2263823 - H 76 -6.3 -4.62069 | TGCTCACTTGAAAAA TTGTG TCA CACAA AAAATGATATCAACT TERM 3013 2264635 - 2264599 - g 70 -9 -3.1352 | gap 1, opp_overlap 2264608, overlap 2264597 2264607 CGGTAATGGAAGAGA TCATTAAACCTATTCTG CCAA CAGAAT-GGTTAAATGA ACAAACCAAATATTT metK 2263980 - 2265134 + | S-adenosylmethionine synthetase TERM 3014 2265184 - 2265166 - T 72 -7.4 -3.82499 | opp_overlap 2265166 AGCAAACTCATTAAA CCACATCT TTT AGGTGTGG TTTTTTTATTCCTGA TERM 3015 2265166 - 2265184 + T 100 -9.6 -5.84381 | opp_overlap 2265166 AGCAAACTCATTAAA CCACATCT TTT AGGTGTGG TTTTTTTATTCCTGA TERM 3016 2265247 - 2265229 - T 100 -6.6 -5.71983 | TTAACCATAAAAAAA CCCCGCAA TAT TAACGGGG AACTCAAAGTCAGTA PMI2096 2267004 - 2265295 - | hypothetical protein PMI2097 2267832 - 2268023 + | hypothetical protein TERM 3017 2268638 - 2268623 - g 77 -6.2 -4.63218 | opp_overlap 2268622 TTCTGCCCAATAAAA CTTCAT CGCG ATGAAG CATTATTAGAAGCCT PMI2098 2268032 - 2268763 + | hypothetical protein TERM 3018 2269211 - 2269199 - g 75 -5.5 -4.71468 | overlap 2269200 ATAAGAAAAAAAACA CGCCA CTA TGGCA ATACGCTCTATTATC TERM 3019 2270263 - 2270240 - g 72 -9.6 -2.94416 | CACTTTCAGCACATA TTGGCCAACG CATA CGTTGGGCAA AAGGAATGATACAAA bcsA 2268769 - 2271366 + | cellulose synthase catalytic subunit [UDP-forming] bcsB 2271433 - 2273724 + | cyclic di-GMP binding protein TERM 3020 2276434 - 2276421 - g 78 -3.9 -5.28683 | ATTAACAGGAAAAAA TGTTA AAAA TAACA GCAGTGTAAAAGCCA bcsC 2273728 - 2277003 + | cellulose synthase protein TERM 3021 2277022 - 2277055 + T 100 -12.5 -5.26918 | opp_overlap 2277022 2277025 2277029 CGTAACAAGATTAAA CAACAAACAGACAGC TAAT GCGGTCCGTTTGTTG TTTTTTATCGCGTGT TERM 3022 2277055 - 2277022 - T 100 -14.7 -4.01135 | opp_overlap 2277022, overlap 2277025 2277029 CGTAACAAGATTAAA CAACAAACAGACAGC TAAT GCGGTCCGTTTGTTG TTTTTTATCGCGTGT TERM 3023 2277052 - 2277025 - T 91 -10.6 -4.11363 | opp_overlap 2277022, overlap 2277022 2277029 AACAAGATTAAACAA CAAACAGACAGC TAAT GCGGTCCGTTTG TTGTTTTTTATCGCG TERM 3024 2277048 - 2277029 - T 71 -5.6 -4.61162 | opp_overlap 2277022, overlap 2277025 2277022 AGATTAAACAACAAA CAGACAGC TAAT GCGGTCCG TTTGTTGTTTTTTAT PMI2102 2277501 - 2277088 - | hypothetical protein TERM 3025 2277198 - 2277188 - G 73 -8.2 -3.92324 | overlap 2277183 CCCGCTAATACCAAA CCCG GTC CGGG GCAAATACCCGCAAG PMI2103 2277940 - 2277506 - | hypothetical protein TERM 3026 2277876 - 2277865 - G 72 -4.4 -4.81163 | TAAACAGTAATAAAA TAGC CGCT GCTA AACCTATTAATAGCC PMI2104 2278267 - 2277944 - | ArsR-family transcriptional regulator sprT 2278372 - 2278878 + | metallopeptidase PMI2106 2278994 - 2279176 + | hypothetical protein TERM 3027 2279297 - 2279328 + F 71 -6.8 -4.0827 | overlap 2279322 2279323 TTGGGATGGGTGATG GTATATATCCTTTA GCTT TAAATGATGTATAC TTTGTATGCGTATCT TERM 3028 2279499 - 2279486 - g 79 -6.7 -4.5115 | overlap 2279488 GATAAAAAGGCAAAA GGTGA TGTA TCACC AGATGAAATTATGGA PMI2107 2279366 - 2279962 + | hypothetical protein PMI2108 2279953 - 2280363 + | hypothetical protein TERM 3029 2280498 - 2280466 - T 100 -11.6 -5.55769 | gap 1, opp_overlap 2280466 2280470 GCCCATAACAAAAAA TAAAGCCGAT-AACT TGTT AGTTTATCGGCTTTA TTCGGTATAAATAGG TERM 3030 2280466 - 2280498 + T 87 -11.6 -3.1355 | gap 1, opp_overlap 2280466, overlap 2280470 GCCCATAACAAAAAA TAAAGCCGAT-AACT TGTT AGTTTATCGGCTTTA TTCGGTATAAATAGG TERM 3031 2280470 - 2280494 + T 83 -8 -4.23213 | gap 1, opp_overlap 2280466, overlap 2280466 ATAACAAAAAATAAA GCCGAT-AACT TGTT AGTTTATCGGC TTTATTCGGTATAAA mgtE 2281601 - 2280528 - | magnesium transporter TERM 3032 2280621 - 2280610 - G 73 -5.8 -4.64334 | AACGTTGCAATAAAA GGTG CAGA CACC ACCGCTGGATCAACA PMI2110 2282361 - 2282029 - | lipoprotein TERM 3033 2282538 - 2282517 - R 100 -14.5 -5.70522 | AATAATAACAAAAAA CCCCGCTAA TAAA TTAGCGGGG TAAAATAGAAGGATA hcr 2283586 - 2282582 - | NADH oxidoreductase hcp 2285296 - 2283644 - | hydroxylamine reductase TERM 3034 2285689 - 2285663 - H 70 -8.2 -3.1247 | opp_overlap 2285660 ATTTTTGATAGTTAA TATTACCTATTG CAT CAATAGCTAATA AAATTACTACAATTG TERM 3035 2286957 - 2286947 - g 73 -6.8 -4.14397 | ATGCCACAAACCAAA TGCG TGT CGCA CGTGAAGAAATTTTT aldB 2285782 - 2287263 + | aldehyde dehydrogenase TERM 3036 2287319 - 2287336 + T 100 -9.9 -5.35815 | opp_overlap 2287334 TATACTCATCTCTTA GCCTTCT CCCC AGAAGGC TTTTTATTTGCTGTA PMI2114 2288854 - 2287454 - | sodium:alanine symporter TERM 3037 2288683 - 2288664 - G 70 -5.7 -4.31379 | opp_overlap 2288662 2288664 ATTAATGCATTAAAA GGTGAGA TTTGTC CCTCACC TCTTTTATCATTTTT TERM 3038 2290448 - 2290426 - g 100 -8.4 -5.67283 | opp_overlap 2290428, overlap 2290428 AAGCCAAAGAAAAAA CAGAGGCTCC CAA AGAGCCCCTA TAGTTTTCAAATACT clcA 2289051 - 2290451 + | H(+)/Cl(-) exchange transporter TERM 3039 2290446 - 2290428 - T 88 -8.8 -4.45696 | opp_overlap 2290428, overlap 2290426 GCCAAAGAAAAAACA GAGGCTCC CAA AGAGCCCC TATAGTTTTCAAATA TERM 3040 2290499 - 2290463 - T 72 -8.9 -2.61322 | opp_overlap 2290468, overlap 2290468 ATAGTTTTCAAATAC TAAAATACCCTCGCT GTGATCT AACGAGGGTATTTTT CTCACCATCTATTTA TERM 3041 2290494 - 2290468 - T 88 -8.8 -4.49756 | opp_overlap 2290468, overlap 2290463 TTTCAAATACTAAAA TACCCTCGCT GTGATCT AACGAGGGTA TTTTTCTCACCATCT TERM 3042 2290468 - 2290494 + T 86 -7.3 -4.84761 | opp_overlap 2290468 2290463 TTTCAAATACTAAAA TACCCTCGCTG TGATC TAACGAGGGTA TTTTTCTCACCATCT PMI2116 2291369 - 2290515 - | tellurite resistance protein PMI2117 2292620 - 2291451 - | potassium channel protein TERM 3043 2292588 - 2292559 - G 100 -14.5 -4.51224 | opp_overlap 2292563 AAGATCAATAAGAAA GACATCGTCTTTC TGCT AAAAGACGATGTC TCCATAAAATTAACG PMI2118 2293722 - 2292637 - | exported carbon-nitrogen hydrolase TERM 3044 2293913 - 2293895 - R 100 -11.8 -6.23209 | opp_overlap 2293895 TTAAGTAAAAAAAAA CTGATGCT AAA AGCATCAG TTTTTAATCTATTAG TERM 3045 2293895 - 2293913 + r 100 -11.8 -4.87807 | opp_overlap 2293895 TTAAGTAAAAAAAAA CTGATGCT AAA AGCATCAG TTTTTAATCTATTAG PMI2119 2294546 - 2293968 - | hypothetical protein PMI2120 2295146 - 2294592 - | membrane-associated cytochrome TERM 3046 2295863 - 2295841 - H 72 -5 -4.83615 | overlap 2295843 CATTGCGCACAAAAA CACTAATCTA TTT TAAATTAGTA ATAAACACCAACAAA PMI2121 2296223 - 2297047 + | phosphosugar-binding regulatory protein TERM 3047 2297062 - 2297083 + F 80 -7.3 -4.64676 | opp_overlap 2297062 ACATATTATTTAAAA CTGCATCTT ATAT AAGGTGCGG TTTTATTAAAAATAG PMI2122 2297164 - 2298006 + | haemagglutinin PMI2123 2298216 - 2298704 + | hypothetical protein TERM 3048 2299843 - 2299822 - g 88 -8.1 -5.12617 | CAAGTACCGAAAAAA TACCTCGAT GCTT ATCAAGGTA AGACATCAAAAGAGT PMI2124 2299036 - 2300595 + | exported sulfatase TERM 3049 2300632 - 2300602 - f 77 -4.1 -5.51353 | gap 1, opp_overlap 2300607, overlap 2300604 2300605 GAAAAATAATAAAAA CATCT-GCGCCATA ACCT TATGGCGCTATATA TAAACCTAATTCGCT TERM 3050 2300607 - 2300626 + F 90 -12.2 -2.99471 | opp_overlap 2300605 2300604 2300602 ATAATAAAAACATCT GCGCCATA ACCT TATGGCGC TATATATAAACCTAA TERM 3051 2300679 - 2300658 - f 80 -6 -5.0916 | overlap 2300652 TCGCTAATATAAAAA TCCTTTTA ATAAAA TAAAAGGA AGACGTCCTACATCT TERM 3052 2301030 - 2301015 - g 76 -7.6 -4.15396 | TTTTAAATTAAATAA TGGTTG GATA CAACCA GGATTAAAAATACGT PMI2125 2300740 - 2301624 + | hypothetical protein TERM 3053 2302300 - 2302290 - g 75 -5.4 -4.81359 | AAGGTAAAGATAAAA CCAT TCA ATGG GAAGGTAACTTCATG TERM 3054 2302622 - 2302593 - g 73 -7.9 -3.87994 | overlap 2302594 2302596 ATTCATGGTTAGAAA CGACACCACCA AATATTAG CGGTGGTGTCA GTGGTAATCAATTAA TERM 3055 2302718 - 2302731 + G 77 -5.3 -4.89477 | opp_overlap 2302718 GTCACAGAGAATGGA TTAGC AGCA GCTAA TTTTATTATTCCAAC PMI2126 2301662 - 2303827 + | autotransporter TERM 3056 2304408 - 2304426 + G 75 -8.2 -4.08692 | GTCGCTCTTTAGGTG CGAATGTT GAC AGCATTCG TTTTAAAGCCCCTTC PMI2127 2303840 - 2306905 + | chondroitin ABC endolyase 1 precursor TERM 3057 2306919 - 2306936 + F 100 -9.1 -5.79595 | opp_overlap 2306919 GATTAAACCTTTAAA GGAGCGC ATTC GCGTTCC TTTTTTATTTTGCAG PMI2128 2306963 - 2310004 + | chondroitin ABC lyase precursor TERM 3058 2310053 - 2310027 - f 100 -14.6 -4.06903 | opp_overlap 2310027 AACTTTTAAATTAAA GAGTCTCGATAT AAA ACATCGAGACTC TTTTTATTTATAAAT TERM 3059 2310027 - 2310053 + F 100 -12.4 -5.38958 | opp_overlap 2310027 AACTTTTAAATTAAA GAGTCTCGATAT AAA ACATCGAGACTC TTTTTATTTATAAAT TERM 3060 2310180 - 2310204 + G 77 -10.1 -3.31144 | opp_overlap 2310192, overlap 2310172 ATGCTCTGCGCCGGG TGCTTGGATCA ATC TGGTTCAAGCA TTATGCCAATACCAG TERM 3061 2310262 - 2310230 - g 93 -9.9 -4.85822 | opp_overlap 2310257 2310260, overlap 2310260 ACCAGAAAGAGAAAA GCCCCGGAAAATATA CAG TATATTAACCGAGGC GGACTCAAACATAGA PMI2129 2310179 - 2310430 + | hypothetical protein TERM 3062 2310493 - 2310466 - f 71 -8.4 -3.2327 | opp_overlap 2310438 2310468, overlap 2310467 CTAATTGAGTATTAA TCTTGTGGGGGA GTTA TCCCCCACAATT TCCTAATTCGATTGT TERM 3063 2310492 - 2310467 - f 87 -11.9 -2.53641 | opp_overlap 2310468, overlap 2310466 TAATTGAGTATTAAT CTTGTGGGGGA GTTA TCCCCCACAAT TTCCTAATTCGATTG TERM 3064 2310468 - 2310491 + F 100 -15.4 -3.85362 | opp_overlap 2310467 2310466 AATTGAGTATTAATC TTGTGGGGGA GTTA TCCCCCACAA TTTCCTAATTCGATT TERM 3065 2310535 - 2310574 + F 100 -13.9 -3.92641 | opp_overlap 2310540 2310543, overlap 2310540 CTAAGCACCCTAATT TATAAGAAGAGGTAACA ATTTTA TGTTACCTCTTCTTTTA TTTATAACTCAACTT TERM 3066 2310569 - 2310540 - f 100 -13.8 -3.42354 | opp_overlap 2310540 2310535, overlap 2310543 CACCCTAATTTATAA GAAGAGGTAACA ATTTTA TGTTACCTCTTC TTTTATTTATAACTC TERM 3067 2310540 - 2310569 + F 100 -13.8 -5.0065 | opp_overlap 2310540 2310543, overlap 2310535 CACCCTAATTTATAA GAAGAGGTAACA ATTTTA TGTTACCTCTTC TTTTATTTATAACTC TERM 3068 2310566 - 2310543 - f 83 -9.7 -3.84808 | opp_overlap 2310540 2310535, overlap 2310540 CCTAATTTATAAGAA GAGGTAACA ATTTTA TGTTACCTC TTCTTTTATTTATAA TERM 3069 2310695 - 2310719 + G 77 -10.1 -3.31144 | opp_overlap 2310707, overlap 2310687 ATGCTCTGCGCCGGG TGCTTGGATCA ATC TGGTTCAAGCA TTGTGCCAATACCAG TERM 3070 2310777 - 2310745 - g 93 -9.9 -4.85822 | opp_overlap 2310772 2310773 2310775, overlap 2310775 ACCAGAAAGAGAAAA GCCCCGGAAAATATA CTG TATATTAACCGAGGC GGACTCAAAAACACA PMI2130 2310694 - 2310930 + | hypothetical protein PMI2131 2311958 - 2310927 - | gycosyl hydrolase kduD 2312770 - 2312015 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3071 2312808 - 2312788 - R 100 -14.1 -3.36518 | opp_overlap 2312788 TTAAAACCTCTAGAA GTGTGGCAA TAA TTGCCACAC TTTTTTTTGTAGGAA TERM 3072 2312788 - 2312808 + r 100 -14.1 -5.93809 | opp_overlap 2312788 TTAAAACCTCTAGAA GTGTGGCAA TAA TTGCCACAC TTTTTTTTGTAGGAA kduI 2313682 - 2312852 - | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase agaA 2314894 - 2313725 - | N-acetylglucosamine-6-phosphate deacetylase agaF 2315325 - 2314891 - | N-acetylgalactosamine-specific PTS system, EIIA component agaD 2316315 - 2315425 - | N-acetylgalactosamine-specific PTS system, EIID component agaW 2317072 - 2316305 - | N-acetylgalactosamine-specific PTS system, EIIC component TERM 3073 2317101 - 2317087 - R 73 -7.8 -3.6003 | opp_overlap 2317087 TAAATTATCCTCAAA CCTGCC TAT AGCAGG TTTTCTTGATCAGGA TERM 3074 2317087 - 2317101 + r 80 -7.1 -4.71426 | opp_overlap 2317087 TAAATTATCCTCAAA CCTGC CTATA GCAGG TTTTCTTGATCAGGA agaV 2317616 - 2317122 - | N-acetylgalactosamine-specific PTS system, EIIB component TERM 3075 2317441 - 2317425 - G 76 -4.4 -5.10064 | opp_overlap 2317424, overlap 2317419 TTGAATAGAGAAAAA GCGAAC CGCAT ATTCGC CGCCAGCAGATGCTT agaS 2318831 - 2317641 - | tagatose-6-phosphate ketose/aldose isomerase agaZ 2320124 - 2318844 - | tagatose 6-phosphate kinase TERM 3076 2320083 - 2320057 - G 75 -9.6 -3.2964 | opp_overlap 2320052 2320061, overlap 2320061 AAAGGGTGGGCAGAA CAAACAGAATAA ATA CCATTCTGTTTG CCTGATTTATGTTGC TERM 3077 2320176 - 2320130 - R 100 -19 -3.67564 | opp_overlap 2320148, overlap 2320132 AAGGATGCATGTAAA TACTAACTCCATAATCAACACC GGC GGTGTTGCTAATGGAGTTAGCA AATTACGCTGTCTTA TERM 3078 2320174 - 2320132 - R 100 -19.4 -3.41569 | opp_overlap 2320148, overlap 2320130 GGATGCATGTAAATA CTAACTCCATAATCAACACC GGC GGTGTTGCTAATGGAGTTAG CAAATTACGCTGTCT agaR 2320958 - 2320179 - | aga operon transcriptional repressor (DeoR-family transcriptional regulator) TERM 3079 2321058 - 2321048 - H 81 -4 -5.55698 | opp_overlap 2321048 GACAACGCAAAAAAA CAAA ACT TTTG ATCTCTTTCACAAAG TERM 3080 2321603 - 2321591 - g 71 -4.9 -4.59773 | TTTTATCTGGAAAAA GAAAA TAT TTTTC AAGATGAGACAAAAG TERM 3081 2322476 - 2322462 - g 71 -4.2 -4.87626 | TCGCAACATCAAAAA CACAGC AAC GCTTTG GTCAAAATAAATACG aslB 2321495 - 2322730 + | Radical SAM superfamily protein (probable arylsulfatase-activating protein) TERM 3082 2323233 - 2323223 - g 79 -6.8 -4.63486 | ACTTTTCCAAGAAAA TGGC TAT GCCA CTGCCAGCATTGGTA PMI2143 2322771 - 2324381 + | arylsulfatase TERM 3083 2324597 - 2324609 + G 72 -3.4 -5.14477 | GATTTTTTTAAGGAT GAGA CACAC TCTC TTTTTTCGCTCTGTG TERM 3084 2325827 - 2325813 - g 83 -5 -5.31275 | CGCGAGTACAAAAAA TCACAG AAA CTGTAA TTGGACAATCAAGAC PMI2144 2324435 - 2325910 + | hypothetical protein TERM 3085 2326085 - 2326061 - g 89 -10.1 -4.17958 | opp_overlap 2326079, overlap 2326050 AATATGCTCAATAAA GCACAGCAT GAAAACT ATGCTGTGC CCGCTTTTAACATTC gatY 2326025 - 2326879 + | tagatose-1,6-bisphosphate aldolase kdgK 2326876 - 2327847 + | 2-dehydro-3-deoxygluconokinase TERM 3086 2328262 - 2328252 - g 75 -5.4 -4.72272 | CTGGTGGAGTAAAAA TGCT AAA AGCA ATGGCGGCACCTTAC eda 2327828 - 2328466 + | Khg/KdpG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase TERM 3087 2328591 - 2328603 + G 70 -7.7 -3.65542 | opp_overlap 2328589, overlap 2328590 TTGCATGGATACACT GGTGT TAA ACACC TATTTTAACACTAAG PMI2148 2328472 - 2329053 + | DJ-1/PfpI-family protein TERM 3088 2329069 - 2329116 + T 70 -6.5 -4.24422 | gap 3, opp_overlap 2329069 ATATTAAATAACTAA GCCCTCTTTTTAAACCGC-C-GTT AAT AACAGTGCGGTTTATTA-GAGGGC TTTCATTTCTTATCA PMI2149 2330557 - 2329142 - | exported amino acid deaminase PMI2150 2330957 - 2331142 + | hypothetical protein TERM 3089 2331894 - 2331911 + G 70 -2.7 -5.06414 | overlap 2331889 CTTGTTCATCACCTT TTGCC AAACAAAA GGCAA TTTTTGTTCGAACAA PMI2151 2331186 - 2332049 + | hypothetical protein arsB 2333469 - 2332180 - | arsenical pump membrane protein TERM 3090 2332233 - 2332256 + g 71 -6 -4.16279 | GTGTAACAATGAGCA CAGGGATAGT CATG ATGATCCCTG TTTTGAAATAATATC TERM 3091 2332276 - 2332288 + g 81 -2.7 -5.67063 | GAAATAATATCCCCA TGTGA TCG TCATA TTTTTTTGTGATAAA TERM 3092 2333270 - 2333248 - G 72 -3.5 -5.08824 | gap 1, overlap 2333249 CGCCCATTCAAAAAA GCC-ACTTTC ATCT AAAAGTAGGC TAATAATAATTACTG arsR 2333880 - 2333545 - | arsenical resistance operon repressor TERM 3093 2334211 - 2334187 - H 70 -7.3 -3.73084 | overlap 2334185 2334192 ACTATTAAAATAACA TCAAATTAAGA AAG TCTTAATTAGA GAAATTAGAAATATA PMI2154 2334312 - 2335022 + | fimbrial subunit TERM 3094 2335037 - 2335075 + F 95 -9.2 -4.93898 | opp_overlap 2335036 2335035 2335039 2335042 ATTTTTAGAATAATT GATAATCACAATATAA AGATTTA TTATATTGCGATTATC TTTTTATACTAATAT folD 2335773 - 2336645 + | FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase] PMI2156 2336649 - 2336861 + | hypothetical protein TERM 3095 2336878 - 2336906 + F 85 -8.9 -4.10478 | opp_overlap 2336888, overlap 2336888 TCAGCTAATCATACT CGTTACTCAAGCG TTA CTCTTTAGTAACG CTTTTTTTATCTTTC TERM 3096 2336907 - 2336888 - f 84 -10.8 -3.05935 | opp_overlap 2336878 2336888 ATACTCGTTACTCAA GCGTTACT CTTT AGTAACGC TTTTTTTATCTTTCT TERM 3097 2336888 - 2336907 + F 100 -10.8 -5.90231 | opp_overlap 2336888, overlap 2336878 ATACTCGTTACTCAA GCGTTACT CTTT AGTAACGC TTTTTTTATCTTTCT fruK 2337498 - 2338439 + | 1-phosphofructokinase TERM 3098 2338446 - 2338468 + T 87 -7.8 -4.86939 | opp_overlap 2338446 AAAATCTAAAAAAAA TATCGGATAA TAA TTACCCGATA TTTTTGACTTTATTG TERM 3099 2338468 - 2338446 - T 100 -10 -5.91981 | opp_overlap 2338446 AAAATCTAAAAAAAA TATCGGATAA TAA TTACCCGATA TTTTTGACTTTATTG cysS 2339896 - 2338505 - | cysteinyl-tRNA synthetase TERM 3100 2339353 - 2339371 + g 76 -7.4 -4.27316 | opp_overlap 2339353 ACATTTTCCAAAGCA CGAAATCC ATA GGATTGCG TTTTACGTTAGCGAC ppiB 2340288 - 2340782 + | peptidyl-prolyl cis-trans isomerase B TERM 3101 2340856 - 2340840 - g 75 -10.1 -3.2327 | opp_overlap 2340840, overlap 2340833 TTAAGTGAGCACGAA CCGGCAA TTA CTGCCGG TTTTCTTCGCTTTTT TERM 3102 2340840 - 2340856 + G 93 -9.4 -4.79075 | opp_overlap 2340833 2340840 TTAAGTGAGCACGAA CCGGCA ATTAC TGCCGG TTTTCTTCGCTTTTT lpxH 2340795 - 2341517 + | UDP-2,3-diacylglucosamine hydrolase purE 2341650 - 2342171 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 2342168 - 2343235 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3103 2343279 - 2343301 + F 79 -8.5 -3.78168 | gap 1, opp_overlap 2343276 2343279 TAGCCTTTAAATGTA CTGGCC-TGT GAAT ACAAGGCCAG TTATTCGCTATTTTT PMI2163 2343359 - 2344627 + | MFS-family transporter TERM 3104 2345043 - 2345029 - g 79 -3.5 -5.42514 | TCACAAATTAAAAAA GGCAG TGATC CTACC TCAGCCCGTATTATT PMI2164 2344705 - 2345730 + | mechanosensitive ion channel protein TERM 3105 2345771 - 2345747 - T 100 -11.6 -5.626 | opp_overlap 2345747 CATCCGATAAAAAAA TGCTGATATC CGTTC GATATCAGCA TTTTTAATTCAATAT TERM 3106 2345747 - 2345771 + T 100 -11.6 -4.89009 | opp_overlap 2345747 CATCCGATAAAAAAA TGCTGATATC CGTTC GATATCAGCA TTTTTAATTCAATAT PMI2165 2348271 - 2345830 - | permease PMI2166 2348954 - 2348268 - | ABC transporter, ATP-binding protein TERM 3107 2348454 - 2348431 - GH 74 -9.6 -2.77523 | TTTCGATCAAGATTA CCTGTTGGCT CATC AGCAAACAGG ATCGCCGGTTGGGTA TERM 3108 2349075 - 2349064 - gH 70 -7.2 -3.64703 | overlap 2349065 GCCTTCCTATTGAAA GCGC ATGG GCGC AACGCCTCGCGGATA TERM 3109 2349257 - 2349243 - gH 82 -10 -3.30619 | AATGATGGCTTACAA GGCTAC CCT GTAGCC CAAACGAAAGAAGCG tesA 2348925 - 2349554 + | acyl-CoA thioesterase PMI2168 2349605 - 2350390 + | probable short-chain dehydrogenase PMI2169 2350476 - 2351333 + | thioredoxin PMI2170 2351373 - 2352296 + | hypothetical protein TERM 3110 2352315 - 2352329 + G 73 -5.7 -4.52803 | overlap 2352322 TGATTGAATGGATTA GTGCT CAGCC AGCAC TTTTCTGGCTTTGTC TERM 3111 2352322 - 2352338 + G 71 -6.5 -4.26463 | overlap 2352315 ATGGATTAGTGCTCA GCCAGCA CTT TTCTGGC TTTGTCTTGGTGTCT TERM 3112 2352773 - 2352785 + G 70 -7.7 -3.75024 | opp_overlap 2352773 2352771 TCGGCATCATCAACA CAGCA TGC TGCTG TTATTGATGATGACA PMI2171 2352299 - 2352820 + | hypothetical protein cueR 2353187 - 2352786 - | MerR-family transcriptional regulator (copper efflux regulator) TERM 3113 2352876 - 2352907 + g 77 -6 -4.64844 | opp_overlap 2352875, overlap 2352875 2352870 TGCTAATAAGAGAAG CCGTTGACGAAT GGCATTTA ATTCGTTAATGG TTTTCTCTATCTCAG TERM 3114 2354522 - 2354512 - g 76 -4.6 -5.12707 | opp_overlap 2354514, overlap 2354514 GCAAAGCCTAAAAAA CGGC AGT GCCA CCATGGACACGCTCG TERM 3115 2355652 - 2355670 + G 72 -8.8 -3.61517 | opp_overlap 2355656 AGAAAACCAATCAGC GAAAGGGG TAA CCCCTGTC TTATTGGCGCAAAAT TERM 3116 2355666 - 2355656 - g 70 -8.2 -3.72642 | opp_overlap 2355652 AACCAATCAGCGAAA GGGG TAA CCCC TGTCTTATTGGCGCA copA 2353322 - 2356276 + | copper-transporting P-type ATPase TERM 3117 2356300 - 2356327 + F 100 -7 -5.55769 | opp_overlap 2356300 2356298 AATCAGTCAAATACA GCCTCTTCTATC TTTA GATACCAGAGGC TTTTTTATTATCCAG TERM 3118 2356395 - 2356378 - f 100 -9.9 -5.87688 | ATAAGTTAAAAAAAA GCCGATA TTGC TATCGGC CAGTCAAAGAGGAAT TERM 3119 2356567 - 2356577 + F 70 -4 -5.06735 | opp_overlap 2356559 2356567, overlap 2356560 AAACATTTTATAAAA TAAG CCA CTTA TTTTTATACTTTATA PMI2174 2356612 - 2358264 + | adhesin TERM 3120 2358293 - 2358325 + F 90 -9.3 -4.67982 | opp_overlap 2358296, overlap 2358302 ATATAGCGGTAAAGA TAAGGAAAGCTAAGT AAA ACTCAGTTTTCCTTG TTTTATTCAATACAA TERM 3121 2358322 - 2358296 - f 79 -8.8 -3.82202 | opp_overlap 2358293 2358302 TAGCGGTAAAGATAA GGAAAGCTAAGT AAA ACTCAGTTTTCC TTGTTTTATTCAATA PMI2175 2358390 - 2359199 + | hypothetical protein PMI2176 2359247 - 2359726 + | oligo-nucleotide binding protein (suppressor of ushA transcription) TERM 3122 2359821 - 2359787 - T 91 -7.9 -5.18297 | opp_overlap 2359795, overlap 2359790 2359795 CAATAAGAAATAAAA TAACAAAAGGCGACA TCCTC TGCCGCCTTTTGGGA ATTATCTATTGTATA TERM 3123 2359818 - 2359790 - T 100 -14 -4.62561 | opp_overlap 2359795, overlap 2359787 2359795 TAAGAAATAAAATAA CAAAAGGCGACA TCCTC TGCCGCCTTTTG GGAATTATCTATTGT TERM 3124 2359813 - 2359795 - T 93 -8.1 -5.14949 | opp_overlap 2359795, overlap 2359790 2359787 AATAAAATAACAAAA GGCGACA TCCTC TGCCGCC TTTTGGGAATTATCT ushA 2361514 - 2359850 - | protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] PMI2178 2362931 - 2361825 - | transposase TERM 3125 2362298 - 2362311 + g 75 -8.1 -4.06502 | TCCGTTGAAGCCTTG CCAGC TTTC GCTGG TTTACTTTAAAACTG PMI2179 2363070 - 2363369 + | transposase TERM 3126 2363380 - 2363421 + F 87 -10.7 -3.65351 | opp_overlap 2363380 2363379, overlap 2363391 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAACAATAG TERM 3127 2363391 - 2363410 + F 95 -10.6 -4.18094 | opp_overlap 2363380 2363379, overlap 2363380 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG TERM 3128 2364771 - 2364782 + G 73 -5.8 -4.65838 | AAACGGCTGCCACTG GCTC TCGT GAGC TTTTTACCCTATGTG rosB 2364104 - 2365864 + | potassium antiporter TERM 3129 2365864 - 2365839 - T 83 -8.4 -4.17958 | AAGAGGGTCAACAAA TTATTGCGCC CAATGC AGCGCAATAA TAGAGATTTATTTTT TERM 3130 2365901 - 2365935 + T 78 -5.9 -4.74013 | opp_overlap 2365907, overlap 2365907 AAGGATTAACAAACT AAAAAAGCAACAC CTTTATCGC GTGTTGCTTTTTA TTTTCTCTCTTTCAC TERM 3131 2365907 - 2365929 + T 85 -4.9 -5.58522 | opp_overlap 2365907, overlap 2365901 TAACAAACTAAAAAA GCAACAC CTTTATCGC GTGTTGC TTTTTATTTTCTCTC TERM 3132 2365929 - 2365907 - T 82 -4.9 -5.46129 | opp_overlap 2365907 2365901 TAACAAACTAAAAAA GCAACAC CTTTATCGC GTGTTGC TTTTTATTTTCTCTC gsk 2367285 - 2365975 - | inosine-guanosine kinase TERM 3133 2367371 - 2367348 - R 100 -14 -3.002 | opp_overlap 2367348 ATTAGTGGAGAGACA GTAGGTGTAC GTCT GTACACCTAC TTTTATTTGTGGATA TERM 3134 2367348 - 2367371 + r 100 -14 -5.0065 | opp_overlap 2367348 ATTAGTGGAGAGACA GTAGGTGTAC GTCT GTACACCTAC TTTTATTTGTGGATA wzz 2368506 - 2367388 - | O-antigen chain length determinant TERM 3135 2368443 - 2368405 - G 90 -9 -4.86029 | opp_overlap 2368414, overlap 2368408 ATAAAGAACAGAAAA TAACTCAAACAGATCGAT TTC ATCGTTCTGTTTTAGATA AAAATCGTCGAAATG TERM 3136 2368440 - 2368408 - G 91 -10.7 -4.47977 | opp_overlap 2368414, overlap 2368405 AAGAACAGAAAATAA CTCAAACAGATCGAT TTC ATCGTTCTGTTTTAG ATAAAAATCGTCGAA TERM 3137 2368414 - 2368434 + g 82 -8.3 -4.18494 | opp_overlap 2368408 2368405 AGAAAATAACTCAAA CAGATCGAT TTC ATCGTTCTG TTTTAGATAAAAATC hemH 2369638 - 2368670 - | ferrochelatase TERM 3138 2369761 - 2369777 + r 91 -12.3 -3.39187 | opp_overlap 2369761 ATTTTGTAAAAAAAA TCCCGGT CTA ACCGGGA TTGCTCTTCGGTGTT TERM 3139 2369777 - 2369761 - R 100 -12.3 -5.75945 | opp_overlap 2369761 ATTTTGTAAAAAAAA TCCCGGT CTA ACCGGGA TTGCTCTTCGGTGTT adk 2370442 - 2369798 - | adenylate kinase TERM 3140 2370359 - 2370374 + g 79 -5.4 -4.9448 | opp_overlap 2370359, overlap 2370354 ATCACCGGTTGAAAT CTGTGG GATA CCATAG TTTTCTTTAATGAAT TERM 3141 2370599 - 2370573 - R 100 -9.5 -6.09196 | opp_overlap 2370573 CGCAAAAGAAAAAAA CCACGCTCTCT TGCGC AAAGAACGTGG TTTAAATGATTGAAA htpG 2372508 - 2370625 - | chaperone protein HtpG (heat shock protein HtpG) TERM 3142 2372262 - 2372282 + g 85 -2.5 -5.72622 | overlap 2372265 TCATACCTATGCCGT TATCACTGA TAG TCAGTGTTC TTTTTTCTTTATCAG TERM 3143 2372265 - 2372279 + g 90 -8.6 -4.9072 | overlap 2372262 TACCTATGCCGTTAT CACTGA TAG TCAGTG TTCTTTTTTCTTTAT purT 2373868 - 2372669 - | phosphoribosylglycinamide formyltransferase PMI2188 2374891 - 2373980 - | hypothetical protein TERM 3144 2374694 - 2374684 - G 74 -4 -5.1634 | opp_overlap 2374684 ATAAACACATAAAAA TAGA GCG TCTA TCTTGGAGAACAGCA TERM 3145 2374842 - 2374830 - G 71 -6.2 -4.26475 | AGCCGATAAAAAAGA GGGG TTATT CCCC ATAAAATATAGGAGC TERM 3146 2375070 - 2375032 - R 100 -14.3 -6.18768 | AAAACATAAAAAAAA TCTCTATAAATAAAGTT GTATA AACCTTATTTATAGAGA TCACAAAAAGACCAG cscK 2376079 - 2375132 - | fructokinase cscA 2376309 - 2377775 + | sucrose-6-phosphate hydrolase (sucrase) (invertase) TERM 3147 2377832 - 2377809 - T 89 -11.1 -3.75332 | opp_overlap 2377795 2377808 2377811 ACTCTCTAACGGAAA GAGAGTCTC GTTACA GAGACTCTC GTTCAATTAACTGAC cscR 2378814 - 2377819 - | sucrose operon repressor (LacI-family transcriptional regulator) TERM 3148 2378563 - 2378549 - G 79 -11.4 -2.66272 | overlap 2378545 CTCCAGCCAAACTGA CGAGCG GTA CGCTCG ATGGATAAAATCATT TERM 3149 2379400 - 2379383 - g 71 -6.3 -4.24002 | opp_overlap 2379383 CGGCAAATGTGAAAA CCTATTC AAAT GAACAGG CATTTTTAAAGTACT PMI2192 2379289 - 2379924 + | LuxR-family transcriptional regulator PMI2193 2380875 - 2381543 + | CDP-alcohol phosphatidyltransferase PMI2194 2381540 - 2382220 + | acyltransferase PMI2195 2382213 - 2383148 + | cytidylyltransferase TERM 3150 2383194 - 2383165 - f 71 -6.6 -4.15044 | opp_overlap 2383165 TCCCTTTTGAATAAA TGCTGGTAAT CTGCAAAATT ATTACCAGCA TTTCTATAAATAAAT TERM 3151 2383165 - 2383194 + F 71 -6.6 -4.06678 | opp_overlap 2383165 TCCCTTTTGAATAAA TGCTGGTAAT CTGCAAAATT ATTACCAGCA TTTCTATAAATAAAT PMI2196 2383421 - 2384242 + | membrane-associated CAAX amino terminal protease PMI2197 2384601 - 2385515 + | LysR-family transcriptional regulator TERM 3152 2385537 - 2385520 - T 100 -9.9 -5.26875 | opp_overlap 2385520 2385519 CCCTTAACTAAAAAA GGCAAAC CGAA GTTTGCC CTTGTTGATAACATT TERM 3153 2385520 - 2385537 + T 79 -9.9 -2.83639 | opp_overlap 2385520, overlap 2385519 CCCTTAACTAAAAAA GGCAAAC CGAA GTTTGCC CTTGTTGATAACATT PMI2198 2386809 - 2385565 - | MFS-family transporter arcC 2387739 - 2386834 - | carbamate PMI2200 2388610 - 2387786 - | hypothetical protein PMI2201 2389912 - 2388647 - | hypothetical protein fdrA 2391592 - 2389925 - | protein FdrA (multicopy suppressor of dominant negative ftsH mutants) TERM 3154 2391282 - 2391300 + g 72 -3.1 -5.055 | CGCCAGCTACGTACA GTGGTTA ATTTA TTACCAC TTTTTTGACCGTTAG TERM 3155 2392034 - 2392011 - R 100 -9 -5.48514 | opp_overlap 2392010 ATCAACAAATAAAAA GCACTTTATT AATA AACAAAGTGC CTTAAATAATTTTCA TERM 3156 2392155 - 2392123 - R 91 -7.9 -5.31158 | opp_overlap 2392126 2392154, overlap 2392126 GAAAAAAAGCAAAAA TAATGCCTATAAAAA TAA TATTTATAGGCATTT TAAAATTAATAAGTT TERM 3157 2392152 - 2392126 - R 93 -9.6 -4.64346 | opp_overlap 2392126, overlap 2392123 AAAAAGCAAAAATAA TGCCTATAAAAA TAA TATTTATAGGCA TTTTAAAATTAATAA TERM 3158 2392126 - 2392152 + r 90 -9.6 -4.20696 | opp_overlap 2392123 2392126 AAAAAGCAAAAATAA TGCCTATAAAAA TAA TATTTATAGGCA TTTTAAAATTAATAA PMI2203 2392869 - 2392192 - | isochorismatase TERM 3159 2393070 - 2393012 - H 79 -8 -4.14859 | gap 1, opp_overlap 2393026 2393044, overlap 2393026 AGCAATAATGATAAA CACTATTCTAAAAATAGAACACTGAAA CACTTT TGTCATTGTTCTATTTTTAGAATAAT- GAAACCTATTTTCCC PMI2204 2393149 - 2394024 + | pirin-like protein TERM 3160 2394052 - 2394093 + T 100 -10.4 -5.34055 | gap 1, opp_overlap 2394057 2394061, overlap 2394055 2394057 2394061 TTGCTCTATAACTTT TATA-ACAAACGGCTGCTC ACTTA GAGCAGTCGTTTGTATCTA TTTTTTACTCTTTAT TERM 3161 2394055 - 2394089 + T 100 -13.7 -3.7035 | opp_overlap 2394057 2394061, overlap 2394052 2394057 2394061 CTCTATAACTTTTAT AACAAACGGCTGCTC ACTTA GAGCAGTCGTTTGTA TCTATTTTTTACTCT TERM 3162 2394087 - 2394057 - T 100 -14.1 -3.34233 | opp_overlap 2394055 2394052 2394057 2394061, overlap 2394061 CTATAACTTTTATAA CAAACGGCTGCTC ACTTA GAGCAGTCGTTTG TATCTATTTTTTACT TERM 3163 2394057 - 2394087 + T 100 -16.3 -3.40898 | opp_overlap 2394057 2394061, overlap 2394055 2394052 2394061 CTATAACTTTTATAA CAAACGGCTGCTC ACTTA GAGCAGTCGTTTG TATCTATTTTTTACT TERM 3164 2394083 - 2394061 - T 88 -9.1 -4.31835 | opp_overlap 2394057 2394055 2394052 2394061, overlap 2394057 AACTTTTATAACAAA CGGCTGCTC ACTTA GAGCAGTCG TTTGTATCTATTTTT TERM 3165 2394061 - 2394083 + T 100 -11.3 -4.28389 | opp_overlap 2394061 2394057, overlap 2394057 2394055 2394052 AACTTTTATAACAAA CGGCTGCTC ACTTA GAGCAGTCG TTTGTATCTATTTTT PMI2205 2395003 - 2394098 - | LysR-family transcriptional regulator TERM 3166 2395052 - 2395039 - H 76 -5.3 -5.00895 | opp_overlap 2395047 GTCATTATATAAAAA CTGAA TTGT TTCAG CTTCGGAAATTATGA TERM 3167 2395372 - 2395382 + H 72 -2.6 -5.3658 | overlap 2395373 TTACAAACCAAGATG TTAA GAT TTAA TTTTATTTTTATGAT PMI2206 2395514 - 2396986 + | sodium:sulfate symporter TERM 3168 2397043 - 2396998 - T 74 -3 -5.4593 | gap 3, opp_overlap 2397004 2397006, overlap 2397004 GTAAAATAATAAAAA CCAA--AATATGATGCCTAATCA GTC TG-TTAGGCATCATATTAACTAG CGCCAAAGTTCACAC TERM 3169 2397004 - 2397035 + T 90 -12.6 -3.05384 | gap 1, opp_overlap 2397004 2396998, overlap 2397006 TAATAAAAACCAAAA TATGATGCCTAATCA GTC TG-TTAGGCATCATA TTAACTAGCGCCAAA TERM 3170 2397035 - 2397004 - T 100 -12.6 -4.86293 | gap 1, opp_overlap 2397004 2397006, overlap 2396998 TAATAAAAACCAAAA TATGATGCCTAATCA GTC TG-TTAGGCATCATA TTAACTAGCGCCAAA TERM 3171 2397006 - 2397033 + T 84 -10.8 -3.08679 | gap 1, opp_overlap 2397004 2396998, overlap 2397004 ATAAAAACCAAAATA TGATGCCTAATCA GTC TG-TTAGGCATCA TATTAACTAGCGCCA PMI2207 2397393 - 2397040 - | fimbrial operon regulator TERM 3172 2397287 - 2397299 + g 75 -2.7 -5.29445 | CCCGTCATACCATGT TGTTG TCT TAACA TTTTTATTCTTGCGC TERM 3173 2397319 - 2397329 + g 88 -4 -5.84381 | TATTCTTGCGCCAAC TATC TTT GATA TTTTTTTATTCATAA PMI2208 2398369 - 2397386 - | fimbrial adhesin PMI2209 2398643 - 2398350 - | fimbrial operon regulator PMI2210 2399163 - 2398666 - | fimbrial subunit TERM 3174 2399000 - 2399018 + g 88 -4 -5.81412 | opp_overlap 2399015, overlap 2399015 GATGCTTGACCATTT TTAATATT TCT AATATTGA TTTTTTTTAAATCAA PMI2211 2399697 - 2399176 - | fimbrial subunit PMI2212 2402271 - 2399764 - | fimbrial outer membrane usher protein TERM 3175 2400552 - 2400539 - G 78 -3.9 -5.25772 | AAATTATAATAAAAA GTATT ATCA AATAC GCTAAAGGGCACATT TERM 3176 2400905 - 2400889 - G 71 -5.1 -4.6575 | AGATAAACTATAAAA GCCACTC GTT GAATAGC GATAACCTGCTAAAG PMI2213 2402953 - 2402288 - | fimbrial chaperone protein TERM 3177 2403005 - 2402980 - R 83 -10.7 -3.36131 | opp_overlap 2402980 2402983, overlap 2402983 AAAATGATTGTATAA TAAGGTTTAAA TCCC TTTAAACCTTA TGACTTACCTAGTTA TERM 3178 2402980 - 2403005 + r 79 -10.7 -2.5602 | opp_overlap 2402980 2402983, overlap 2402983 AAAATGATTGTATAA TAAGGTTTAAA TCCC TTTAAACCTTA TGACTTACCTAGTTA TERM 3179 2402983 - 2403002 + r 73 -8 -3.4285 | opp_overlap 2402983 2402980, overlap 2402980 ATGATTGTATAATAA GGTTTAAA TCCC TTTAAACC TTATGACTTACCTAG TERM 3180 2403002 - 2402983 - R 77 -8 -3.81 | opp_overlap 2402980 2402983, overlap 2402980 ATGATTGTATAATAA GGTTTAAA TCCC TTTAAACC TTATGACTTACCTAG PMI2214 2403548 - 2403024 - | fimbrial subunit TERM 3181 2404514 - 2404536 + G 70 -2.7 -5.0538 | gap 1 GCGATGTGTATACCG CAGTATCGAC ACCT GGCGAT-CTG TTTTTTCACATACGG PMI2215 2404243 - 2405172 + | peroxidase TERM 3182 2405260 - 2405204 - T 73 -8.4 -3.54768 | gap 2, opp_overlap 2405204 CAAACAAAAAGTTAA TAGCAATAGCTCATACACTGCTCTATAT TCG ATA-AGAACAA-GAAAGAGCTATTGCTA TTCAATATGATGACG PMI2216 2406323 - 2405304 - | fimbrial adhesin TERM 3183 2405406 - 2405418 + g 72 -9.1 -3.31853 | opp_overlap 2405402 GATAGAAAATGTTTT CGCAG CAC CTGCG TTAAGTTTAAATTTA PMI2217 2406940 - 2406395 - | fimbrial subunit PMI2218 2407499 - 2406933 - | fimbrial subunit PMI2219 2408018 - 2407515 - | fimbrial protein TERM 3184 2407654 - 2407669 + g 70 -3.2 -4.99043 | CTTATATCAATATTT TCTACG TTAT CGTTGA TTTTATTTGTGAAAC TERM 3185 2407694 - 2407713 + g 70 -8 -3.73294 | opp_overlap 2407693 2407689 2407696 TGAAACTTAACACAC TAGTAAAC GCAG GTTTACTA TTTGAGCTGTTTTTA TERM 3186 2407878 - 2407894 + g 71 -3.8 -4.87807 | TTGATTTTTTTCATT TTGATT ATAAA AATCAA TTTTTGCTCTATTAA PMI2220 2408752 - 2408042 - | fimbrial chaperone protein TERM 3187 2408311 - 2408327 + g 72 -9.5 -2.9704 | AAACTAATTGATCTT GCCAAAT AGC ATTTGGC TCTCTCAATATTTGT TERM 3188 2408352 - 2408364 + g 72 -3.5 -5.03994 | ATTTGTTTCGGTCTA TAAAA CAA TTTTA TTTTTGTATGTAAGG PMI2221 2411285 - 2408787 - | fimbrial outer membrane usher protein PMI2222 2411929 - 2411363 - | fimbrial subunit TERM 3189 2411941 - 2411982 + r 78 -6.8 -4.39002 | gap 1, opp_overlap 2411946 2411949 2411950, overlap 2411950 ACATAGATTTTGGCC TTAAAT-AATCGAGAGCAG ATTAA CTGCTCTCGTTAAATTTAA TATTTTTTATTCATA TERM 3190 2411975 - 2411946 - R 84 -10.2 -3.53224 | gap 1, opp_overlap 2411941 2411950, overlap 2411949 2411950 GATTTTGGCCTTAAA TAATCGAGAGCAG ATTAA CTGCTCTCG-TTA AATTTAATATTTTTT TERM 3191 2411973 - 2411949 - R 87 -10 -3.90744 | opp_overlap 2411941 2411950, overlap 2411946 2411950 TTTGGCCTTAAATAA TCGAGAGCAG ATTAA CTGCTCTCGT TAAATTTAATATTTT TERM 3192 2411972 - 2411950 - R 100 -13.5 -2.94232 | opp_overlap 2411950 2411941, overlap 2411949 2411946 TTGGCCTTAAATAAT CGAGAGCAG ATTAA CTGCTCTCG TTAAATTTAATATTT TERM 3193 2411950 - 2411972 + r 100 -13.5 -3.33833 | opp_overlap 2411949 2411946 2411950, overlap 2411941 TTGGCCTTAAATAAT CGAGAGCAG ATTAA CTGCTCTCG TTAAATTTAATATTT pmpA 2412540 - 2411989 - | fimbrial subunit TERM 3194 2412513 - 2412497 - G 85 -7.3 -4.84761 | opp_overlap 2412509 2412510, overlap 2412510 2412512 ACAGTCGCAGAAAAA GCCATTG ATG CAATAGC GAACATCGCTAATTT PMI2224 2413034 - 2412726 - | fimbrial operon regulator TERM 3195 2413193 - 2413211 + r 74 -6.8 -4.27007 | opp_overlap 2413191 2413193 2413196, overlap 2413176 TAGATAATCAAAATA CGATAGTT TAC AACTATTG TTTGTTAAATATTTA TERM 3196 2413270 - 2413259 - R 77 -3 -5.64274 | GCATGTAGAAAAAAA TGAA TAAA TTCA ATAGTAAAATTACTT TERM 3197 2413312 - 2413332 + r 83 -8.3 -4.25859 | opp_overlap 2413311, overlap 2413309 2413316 GTTAATAAATGCAAT TTTACACGC ACT GCGTGTTAA TTATTTTCACTTAAG TERM 3198 2413316 - 2413328 + r 80 -9.1 -3.694 | opp_overlap 2413311, overlap 2413312 2413309 ATAAATGCAATTTTA CACGC ACT GCGTG TTAATTATTTTCACT PMI2225 2414617 - 2413793 - | metal-dependent phosphoesterase PMI2226 2416590 - 2414701 - | PTS system, IIabc component TERM 3199 2416560 - 2416578 + g 71 -6.8 -4.08144 | opp_overlap 2416538, overlap 2416563 CACCAACAATAGCGA GAATTTGT TTT GCAAATTC TTTATAATTCATAGC PMI2227 2417552 - 2416698 - | transcriptional antiterminator TERM 3200 2417653 - 2417601 - H 100 -17.6 -2.61718 | gap 1, opp_overlap 2417602 2417607, overlap 2417607 TAAGGCTTAAAAACG CA-AAAACCCATTTGTAGACAAAAA ATAC TTTTCATCTACAAATGGGTTTTGTG TAGTAAGCCAGGTAC TERM 3201 2417602 - 2417651 + H 89 -12.5 -2.78463 | opp_overlap 2417601 2417607, overlap 2417607 AAGGCTTAAAAACGC AAAAACCCATTTGTAGACAAAAA ATAC TTTTCATCTACAAATGGGTTTTG TGTAGTAAGCCAGGT TERM 3202 2417646 - 2417607 - H 100 -16.8 -4.92239 | opp_overlap 2417607 2417602, overlap 2417601 TTAAAAACGCAAAAA CCCATTTGTAGACAAAAA ATAC TTTTCATCTACAAATGGG TTTTGTGTAGTAAGC TERM 3203 2417607 - 2417646 + H 100 -12.4 -4.57353 | opp_overlap 2417601 2417607, overlap 2417602 TTAAAAACGCAAAAA CCCATTTGTAGACAAAAA ATAC TTTTCATCTACAAATGGG TTTTGTGTAGTAAGC PMI2228 2417975 - 2418412 + | acetyltransferase TERM 3204 2418656 - 2418670 + F 81 -10 -3.10879 | TTCGAATCCCACACC CCCATG ATG CATGGG TGTGTTAACGTTGAT TERM 3205 2419417 - 2419405 - g 72 -9.1 -3.41602 | opp_overlap 2419397 2419403 2419412 GTGATGGCAGTACAA GCTGG TTT CCAGC CGTTGGATTATGAAA PMI2229 2418922 - 2419539 + | cell filamentation protein PMI2230 2419700 - 2419536 - | hypothetical protein PMI2231 2420922 - 2419966 - | transport protein PMI2232 2421509 - 2420922 - | TetR-family transcriptional regulator TERM 3206 2421039 - 2421024 - G 79 -9 -3.96148 | GCCTTCCAGCAGAAA GGCAAG ATGT CTTGCC ATACAGTGTGCGCTT PMI2233 2421986 - 2421804 - | hypothetical protein PMI2234 2422456 - 2421983 - | hypothetical protein TERM 3207 2424369 - 2424354 - g 72 -3.2 -5.17576 | opp_overlap 2424355, overlap 2424355 TAGCAATTGAAAAAA TGCTCT ACGA AGAGCT TTTCGAAAAACTATT TERM 3208 2424355 - 2424368 + G 71 -6.7 -4.08394 | opp_overlap 2424354 2424355 AGCAATTGAAAAAAT GCTCT ACGA AGAGC TTTTCGAAAAACTAT mutS 2422775 - 2425339 + | DNA mismatch repair protein TERM 3209 2425376 - 2425350 - T 100 -16.8 -5.33124 | opp_overlap 2425350 AATAACAAAAGAAAA GCCGATTAGTTA ATT TAACTAATCGGC TTGATAACGCATTGA TERM 3210 2425350 - 2425376 + T 100 -16.8 -3.15579 | opp_overlap 2425350 AATAACAAAAGAAAA GCCGATTAGTTA ATT TAACTAATCGGC TTGATAACGCATTGA rpoS 2426394 - 2425405 - | RNA polymerase sigma factor RpoS TERM 3211 2426997 - 2427032 + r 95 -10.6 -4.24123 | opp_overlap 2427001, overlap 2427001 TAATTTAATAACTAA AAAAGCCCTTTTGTTA ATAT TAACAAAAGGGCTTAA TTTTCAGATTATTCA TERM 3212 2427028 - 2427001 - R 100 -15.8 -5.37865 | opp_overlap 2427001 2426997 TTAATAACTAAAAAA GCCCTTTTGTTA ATAT TAACAAAAGGGC TTAATTTTCAGATTA TERM 3213 2427001 - 2427028 + r 100 -15.8 -3.69437 | opp_overlap 2427001, overlap 2426997 TTAATAACTAAAAAA GCCCTTTTGTTA ATAT TAACAAAAGGGC TTAATTTTCAGATTA nlpD 2428193 - 2427069 - | lipoprotein pcm 2428973 - 2428347 - | protein-L-isoaspartate O-methyltransferase surE 2429731 - 2428967 - | multifunctional protein SurE (stationary-phase survival protein SurE) [includes: 5'/3'-nucleotidase and exopolyphosphatase] truD 2430761 - 2429709 - | tRNA pseudouridine synthase D TERM 3214 2429868 - 2429886 + g 72 -8.8 -3.5121 | opp_overlap 2429861, overlap 2429860 2429867 CAAATTAATCGCACG GCGAGTGG TAT CAACTCGC TCTTGTTGTGCTAAT ispF 2431243 - 2430761 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2431991 - 2431245 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ftsB 2432351 - 2432031 - | cell division protein FtsB cysC 2433227 - 2432613 - | adenylyl-sulfate kinase TERM 3215 2433158 - 2433140 - G 73 -7.5 -4.10953 | opp_overlap 2433139 2433140 ACCCAGTAAACCAAA GTACACA TCCTT TGTGTAC CTGTTGTGCTTCACG cysN 2434684 - 2433227 - | sulfate adenylyltransferase subunit 1 cysD 2435604 - 2434696 - | sulfate adenylyltransferase subunit 2 cysG 2437037 - 2435616 - | siroheme synthase [includes: uroporphyrin-III C-methyltransferase and sirohydrochlorin ferrochelatase] TERM 3216 2436145 - 2436125 - G 71 -4.8 -4.56597 | CTCCGCGTCCAAAAA TAAAAGGA TCGCC CCCTTTTA GTCTGACAACTCGTT TERM 3217 2436655 - 2436638 - G 80 -7.7 -4.4773 | gap 1, overlap 2436641 TCATACGAACTAAAA CAG-GGGC TTT GCCCGCTG ATGAAATGGCAATTA TERM 3218 2437220 - 2437193 - R 91 -10.6 -3.97947 | overlap 2437195 TTTACTCACGACAAA GAGGGCAACAGA TGAC TCTATTGCCCAC TCAAAATAAATAGCG TERM 3219 2437218 - 2437195 - R 95 -11.8 -3.5812 | overlap 2437193 TACTCACGACAAAGA GGGCAACAGA TGAC TCTATTGCCC ACTCAAAATAAATAG cysH 2437989 - 2437258 - | phosphoadenosine phosphosulfate reductase cysI 2439716 - 2437986 - | sulfite reductase [NADPH] hemoprotein beta-component cysJ 2441532 - 2439718 - | sulfite reductase [NADPH] flavoprotein alpha-component TERM 3220 2440346 - 2440317 - G 70 -8.8 -3.39529 | gap 1, overlap 2440311 CTAAGGTAAGATGAA CTTCATCATCAAC TTCTT GTTG-TGATGAAG CGATGGAGTAAAGAC TERM 3221 2441556 - 2441570 + H 71 -7.8 -3.52995 | opp_overlap 2441556 2441555, overlap 2441554 CCTTAAAAAAACATT GCACTG CAT CGGTGC TGTTATTGTGGTTGG PMI2251 2441830 - 2442192 + | 6-pyruvoyl tetrahydrobiopterin synthase TERM 3222 2442227 - 2442209 - T 86 -6 -5.47218 | opp_overlap 2442209, overlap 2442193 TTTCACCTAAAAAAA TCAGCC ACTCATA GGCTGA TTTTTTTTAACGATA TERM 3223 2442209 - 2442227 + T 95 -6 -5.76949 | opp_overlap 2442209 2442193 TTTCACCTAAAAAAA TCAGCC ACTCATA GGCTGA TTTTTTTTAACGATA PMI2252 2442923 - 2442252 - | hypothetical protein TERM 3224 2442865 - 2442854 - G 72 -3.6 -5.13741 | GTAATCGAACAAAAA GCGC AGGA ACGC CAGTAAAAACACCTT proY 2443092 - 2444459 + | proline-specific permease TERM 3225 2444508 - 2444480 - T 100 -10.4 -5.1356 | opp_overlap 2444484, overlap 2444484 TGTTATCAAGAAAAA TAAAGGCTGTGA GTCAT TCACAGCCTTTT CTTTATCCATTATCT TERM 3226 2444484 - 2444504 + T 100 -11.9 -5.01553 | opp_overlap 2444480 2444484 ATCAAGAAAAATAAA GGCTGTGAG TCA TTCACAGCC TTTTCTTTATCCATT TERM 3227 2444504 - 2444484 - T 100 -11.2 -5.06961 | opp_overlap 2444484, overlap 2444480 ATCAAGAAAAATAAA GGCTGTGA GTCAT TCACAGCC TTTTCTTTATCCATT mdeA 2445718 - 2444537 - | methionine gamma-lyase TERM 3228 2445652 - 2445631 - G 100 -12.3 -4.58395 | opp_overlap 2445630 TGGACGTTTGAAAAA CAGGAGGCA CCAA TGCCCCCTG ATAATCTAACGGAGA PMI2255 2446136 - 2445738 - | hypothetical protein PMI2256 2447342 - 2446149 - | oxidoreductase PMI2257 2448313 - 2447528 - | endonuclease/exonuclease/phosphatase family protein TERM 3229 2447739 - 2447712 - G 75 -10 -3.08088 | overlap 2447716 AAACGCTTTAACACA TTAACTCTTGGA CGAC TCCAAGCGTTAA AATCCCCCGCCAAAA TERM 3230 2447912 - 2447929 + g 74 -4.1 -5.1244 | opp_overlap 2447914, overlap 2447914 2447919 TAATGCAGATTTAGC AAGCCTT AAAA AAGGCTC TTTTTCTCTTAATGG TERM 3231 2447914 - 2447927 + g 73 -6.7 -4.18115 | opp_overlap 2447914, overlap 2447912 2447919 ATGCAGATTTAGCAA GCCTT AAAA AAGGC TCTTTTTCTCTTAAT TERM 3232 2447995 - 2447983 - G 72 -9.1 -3.38291 | opp_overlap 2447982, overlap 2447986 TTGATAAGGTCATAA CACCC GCA GGGTG CTGTTGAAAGGCTAA TERM 3233 2448146 - 2448174 + g 95 -11.9 -4.63184 | ACGCCAATTGACCCG TTGCTGTTTGTAA ATA TTCCAAACAGCAA TTTTTAAAGTGCCTT TERM 3234 2448537 - 2448498 - R 100 -14.6 -3.71917 | opp_overlap 2448498 2448503 2448508, overlap 2448508 ACTTTAAATTTTAAA CAAAAAAAAACCTAAGTC ATTA GACTTAGGTTTTCTTATG TGTTGGCGGAACGGA TERM 3235 2448498 - 2448537 + r 90 -12.4 -3.01712 | opp_overlap 2448498 2448508, overlap 2448503 2448508 ACTTTAAATTTTAAA CAAAAAAAAACCTAAGTC ATTA GACTTAGGTTTTCTTATG TGTTGGCGGAACGGA TERM 3236 2448503 - 2448532 + r 89 -10.9 -3.68024 | opp_overlap 2448498 2448508, overlap 2448498 2448508 AAATTTTAAACAAAA AAAAACCTAAGTC ATTA GACTTAGGTTTTC TTATGTGTTGGCGGA TERM 3237 2448508 - 2448527 + r 100 -10.8 -4.90002 | opp_overlap 2448498 2448508, overlap 2448503 2448498 TTAAACAAAAAAAAA CCTAAGTC ATTA GACTTAGG TTTTCTTATGTGTTG TERM 3238 2448527 - 2448508 - R 100 -10.8 -6.4753 | opp_overlap 2448508 2448503 2448498, overlap 2448498 TTAAACAAAAAAAAA CCTAAGTC ATTA GACTTAGG TTTTCTTATGTGTTG TERM 3239 2450513 - 2450531 + r 87 -10.3 -3.57798 | overlap 2450506 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3240 2451484 - 2451496 + r 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3241 2451847 - 2451833 - R 71 -8.6 -2.92371 | opp_overlap 2451833 2451830 ATTCAGTTAATGATA GTATCC ATT GGATAC TGGGTTTCCCCATTC TERM 3242 2452533 - 2452516 - R 74 -9.1 -3.07291 | opp_overlap 2452516 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 3243 2454448 - 2454461 + r 71 -6.7 -4.09685 | AGTGCCTATTTTTTG TGGCT TTTA AGCCA TTTTGGCAAGTCGGC gmhB 2455004 - 2454438 - | D,D-heptose 1,7-bisphosphate phosphatase TERM 3244 2455627 - 2455617 - g 79 -3.2 -5.39721 | TTAGCAGATAAAAAA GAGT ATT ACCC TGCCAATTTATCAGG metN 2455215 - 2456246 + | D-methionine ABC transporter, ATP-binding protein metI 2456239 - 2456892 + | D-methionine ABC transporter, permease protein metQ 2456987 - 2457802 + | D-methionine ABC transporter, substrate-binding lipoprotein TERM 3245 2457828 - 2457857 + F 83 -5.7 -5.15634 | opp_overlap 2457834, overlap 2457834 ACTCAACTTAATAAT AAAAAAGGCGGAC ATTT GTTCGCCTTTCTC TTTTTTACTGGGCTA TERM 3246 2457834 - 2457851 + F 90 -9.1 -4.66347 | opp_overlap 2457834, overlap 2457828 CTTAATAATAAAAAA GGCGGAC ATTT GTTCGCC TTTCTCTTTTTTACT TERM 3247 2457851 - 2457834 - f 100 -6.9 -5.64873 | opp_overlap 2457834 2457828 CTTAATAATAAAAAA GGCGGAC ATTT GTTCGCC TTTCTCTTTTTTACT rcsF 2457933 - 2458343 + | regulator of colanic acid capsule synthesis TERM 3248 2458448 - 2458397 - g 90 -10 -4.40003 | CCTTATAAAGAGAAA TTTGCCGTTCCTCGCCAACCTGGA TTAG TCCAGGATGGCGTAGGCCAGCTAA TACTACACACACCTT PMI2263 2458340 - 2459047 + | hypothetical protein proS 2459222 - 2460937 + | prolyl-tRNA synthetase TERM 3249 2461039 - 2461022 - T 100 -9.9 -5.86332 | opp_overlap 2461022 TTAACGTAAAAAAAA CCGCTTT ATTT AAAGCGG TTTTTTTATAATGAA TERM 3250 2461022 - 2461039 + T 100 -9.9 -5.67063 | opp_overlap 2461022 TTAACGTAAAAAAAA CCGCTTT ATTT AAAGCGG TTTTTTTATAATGAA cutF 2461735 - 2461055 - | copper homeostasis lipoprotein TERM 3251 2461524 - 2461506 - G 78 -2.5 -5.47218 | gap 1, opp_overlap 2461506 CCTGACTCAAAAAAA CTTC-GAT TGTC ATCAGAAG TGCCTTGGTAACTTT rof 2461997 - 2462257 + | Rho-binding antiterminator TERM 3252 2462292 - 2462271 - T 100 -11.6 -4.07526 | opp_overlap 2462271 2462274, overlap 2462274 AACTATTTACATAAA CAACCGCC GTAATT GGCGGTTG TTTACGACGCTTGCC TERM 3253 2462271 - 2462292 + T 91 -12.3 -3.55622 | opp_overlap 2462271 2462274, overlap 2462274 AACTATTTACATAAA CAACCGCCG TAAT TGGCGGTTG TTTACGACGCTTGCC TERM 3254 2462289 - 2462274 - T 80 -7.5 -4.15698 | opp_overlap 2462274 2462271, overlap 2462271 TATTTACATAAACAA CCGCC GTAATT GGCGG TTGTTTACGACGCTT TERM 3255 2462274 - 2462289 + T 77 -8.2 -3.91488 | opp_overlap 2462271 2462274, overlap 2462271 TATTTACATAAACAA CCGCCG TAAT TGGCGG TTGTTTACGACGCTT tilS 2463619 - 2462294 - | tRNA(Ile)-lysidine synthase PMI2268 2464537 - 2463794 - | short chain dehydrogenase TERM 3256 2464680 - 2464704 + r 79 -7.3 -4.36914 | opp_overlap 2464680 2464679 TGAAAGTATCACAAG CTATTACTATT AAC AATAGAAATAG TTTTATAAAAGAAAA TERM 3257 2464796 - 2464777 - R 100 -13.6 -5.93809 | opp_overlap 2464775 TCGCCATAAAAAAAA CCCCATGC TATA GCATGGGG AGTGATCTTTTTAAT accA 2465793 - 2464834 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha dnaE 2469288 - 2465806 - | DNA polymerase III, alpha chain TERM 3258 2467445 - 2467472 + g 71 -9.8 -2.90992 | overlap 2467442 ATCAGATCTTTCATG CCACGGGATTCC AATT GGAATACCGCGG TGGTTTCAGAGCGTT TERM 3259 2469160 - 2469133 - G 85 -8.6 -4.37092 | opp_overlap 2469133 AGCCGCTCCATAAAA TTTCACTAACCC ACAT AAGTTAGTGAAA TCTGTAATTGCAAAA rnhB 2469901 - 2469311 - | ribonuclease HII TERM 3260 2469401 - 2469415 + g 74 -6.4 -4.32857 | opp_overlap 2469401, overlap 2469383 TTTTTCCATATGGAA GGCTGT TGG ATAGCC TTTATGTTTGGCAAA lpxB 2471073 - 2469901 - | lipid-A-disaccharide synthase TERM 3261 2470988 - 2470970 - G 72 -9.5 -3.02511 | TGCATTTGTTTAAGA GCGCGGA TTAAT CCCGCGC CCAAGATATCACCGG lpxA 2471884 - 2471081 - | acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase TERM 3262 2471189 - 2471202 + g 73 -6.7 -4.19506 | AGCAATCTCTTCTCG CGCTT CTTC AAGCG TTTTACCATTACGAT TERM 3263 2471823 - 2471802 - G 74 -5.1 -4.8143 | overlap 2471804 CCAATAACGCAAAAA GGGCCAATG CGAA CATTAGCAC CAATTACCGCACCCT fabZ 2472340 - 2471888 - | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase lpxD 2473495 - 2472467 - | UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3264 2472530 - 2472549 + g 86 -10 -4.10429 | opp_overlap 2472529, overlap 2472517 2472531 TTGCATTTCATCAAT TCGCAGCA CCAG TGCTGCGG TTTTACGCCATGCTT TERM 3265 2472531 - 2472548 + g 81 -11.3 -3.05775 | opp_overlap 2472529, overlap 2472530 2472517 TGCATTTCATCAATT CGCAGCA CCAG TGCTGCG GTTTTACGCCATGCT TERM 3266 2473446 - 2473414 - G 72 -9.2 -3.37522 | gap 1, overlap 2473416 2473417 AGCCCATTGAAGCAA GAC-CGGCGATAGTG ATAT CACCATCGCCGTGTA ACTGTGCATTCAATT TERM 3267 2473443 - 2473416 - G 83 -12 -3.25652 | overlap 2473414 2473417 CCCATTGAAGCAAGA CCGGCGATAGTG ATAT CACCATCGCCGT GTAACTGTGCATTCA TERM 3268 2473442 - 2473417 - G 95 -15.5 -2.5507 | overlap 2473416 2473414 CCATTGAAGCAAGAC CGGCGATAGTG ATAT CACCATCGCCG TGTAACTGTGCATTC ompH 2473996 - 2473499 - | outer membrane protein TERM 3269 2473675 - 2473690 + g 70 -3.2 -4.87665 | opp_overlap 2473683 GACGGCTAAAGTCTT GCTCAA AAGC TTGTGC TTTTTGTGCATAAGC yaeT 2476497 - 2474089 - | outer membrane protein assembly factor TERM 3270 2475279 - 2475299 + g 73 -8.3 -3.695 | CTTGATCAGGAGATC CGGGAATAC GCT GTGTTTCCG TTTCGACTGTTTCAA ecfE 2477890 - 2476538 - | protease TERM 3271 2477792 - 2477778 - G 70 -2.8 -5.16206 | opp_overlap 2477789 AAACCAATAGAAAAA CGCTCA ACA TAAACG CCACAGCGTCTTGCT cdsA 2478763 - 2477900 - | phosphatidate cytidylyltransferase uppS 2479523 - 2478765 - | undecaprenyl pyrophosphate synthetase TERM 3272 2479446 - 2479487 + g 77 -8 -4.26076 | CCCTTGTTTTTTTGC CCAACGTCCGTTGCCATC CATAAT GATGGCAACATGCTTTGG TTTTGATGCGGATGA TERM 3273 2479609 - 2479594 - R 93 -6.1 -5.64274 | opp_overlap 2479593 CTACGCACAAAAAAA CCGTG TGACTC CACGG CCTTTGGCAAAGCCT dxr 2480942 - 2479749 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3274 2481114 - 2481091 - R 93 -9.7 -4.64657 | opp_overlap 2481094, overlap 2481061 GTAAATGCTCAAAAA TAATGCCAC ATTTCA GTGGCATTA TCAGAAAAAGAATAA frr 2481690 - 2481133 - | ribosome recycling factor pyrH 2482535 - 2481807 - | uridylate kinase TERM 3275 2482263 - 2482243 - G 77 -9.7 -3.51924 | overlap 2482227 2482254 CGTGCATTGACATAA GCACGATGC AAT GCATCACGC ATTGCTAAGCCATTC TERM 3276 2482654 - 2482631 - R 100 -13.2 -4.66987 | opp_overlap 2482633 2482636, overlap 2482633 GAGATTGTAACAAAA CAGAACCGCC TTAA GGCGGTTCTA TTAACGCAAAGCGTT TERM 3277 2482652 - 2482633 - R 100 -13.6 -3.94438 | opp_overlap 2482633 2482636, overlap 2482631 GATTGTAACAAAACA GAACCGCC TTAA GGCGGTTC TATTAACGCAAAGCG TERM 3278 2482633 - 2482652 + r 100 -13.6 -3.01712 | opp_overlap 2482631 2482633, overlap 2482636 GATTGTAACAAAACA GAACCGCC TTAA GGCGGTTC TATTAACGCAAAGCG TERM 3279 2482636 - 2482649 + r 82 -9.5 -3.65812 | opp_overlap 2482633 2482631, overlap 2482633 TGTAACAAAACAGAA CCGCC TTAA GGCGG TTCTATTAACGCAAA TERM 3280 2482656 - 2482670 + r 82 -8.6 -4.04927 | TTAAGGCGGTTCTAT TAACGC AAA GCGTTA TTATTTGCTCATTGC tsf 2483522 - 2482671 - | elongation factor Ts TERM 3281 2483603 - 2483584 - R 100 -15 -3.59738 | opp_overlap 2483577 TAGCAGATGTGTAAA GGGGGCCT ATTG AGGCCCCC TAACCAATATATAGC rpsB 2484383 - 2483658 - | 30S ribosomal protein S2 TERM 3282 2483849 - 2483837 - G 74 -9.1 -3.52849 | opp_overlap 2483837 2483836, overlap 2483835 CAACGATAGCAAATA CTGGG ATA CCCAG GTTGTTTGCTTCTTT TERM 3283 2485327 - 2485317 - g 81 -5.4 -5.06816 | ACCTTGCAATAAAAA TGGT AAA ACCA GGTATTCGCTTACGT TERM 3284 2485591 - 2485611 + G 77 -8.3 -3.84246 | overlap 2485594 CAAAGATCGCGGTTG GTCTGCTCA ATA TGAGCATAC TTTAGTGGTTACCGA map2 2484902 - 2485699 + | methionine aminopeptidase TERM 3285 2485725 - 2485749 + F 100 -6.5 -6.34616 | TCTAAAATGTAAAAA CGACATATTTT TTC GAGGTATGTCG TTTTTTTTATTTTCA TERM 3286 2486505 - 2486488 - g 70 -5.5 -4.3467 | opp_overlap 2486491, overlap 2486491 AGCCTGATATTAAAA GTAGTCC TGGG GGACTTC GTGATATTCACACCC glnD 2485854 - 2488499 + | [protein-PII] uridylyltransferase dapD 2488534 - 2489358 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3287 2489394 - 2489367 - f 71 -7 -3.98627 | opp_overlap 2489367 2489369 CGACTAATATAATAA CAGCGGATAGAA TGAA TTCTGTTCGCTG TATCTCATTCATCTT TERM 3288 2489367 - 2489394 + F 87 -11.4 -3.03212 | opp_overlap 2489367, overlap 2489369 CGACTAATATAATAA CAGCGGATAGAA TGAA TTCTGTTCGCTG TATCTCATTCATCTT TERM 3289 2489369 - 2489392 + F 70 -8.2 -3.06361 | opp_overlap 2489367, overlap 2489367 ACTAATATAATAACA GCGGATAGAA TGAA TTCTGTTCGC TGTATCTCATTCATC PMI2289 2489428 - 2489814 + | hypothetical protein PMI2290 2490377 - 2489934 - | flavodoxin PMI2291 2491939 - 2490449 - | hypothetical protein TERM 3290 2491389 - 2491411 + g 83 -9.4 -3.84719 | ATATTTTGATATTTA TTTACATTAT TAT ATAATGTAAA TTTAGGTTTACGCAT TERM 3291 2491849 - 2491868 + g 100 -5.8 -6.11243 | opp_overlap 2491851 TTCCTAAAGAAATAT CATCTTTT CCCA AAGAGATG TTTTTTTTATTCCCT TERM 3292 2492036 - 2492012 - R 100 -8 -5.80364 | gap 1, opp_overlap 2492007 2492012 ATTTCAATAAAAAAA CACTCTTA-GC TGAT GCATAAGAGTG TTTTCTAATTTAGTC TERM 3293 2492012 - 2492036 + r 85 -8 -4.63172 | gap 1, opp_overlap 2492012, overlap 2492007 ATTTCAATAAAAAAA CACTCTTA-GC TGAT GCATAAGAGTG TTTTCTAATTTAGTC ptsG 2493509 - 2492061 - | glucose-specific PTS system, EIIBC component TERM 3294 2492649 - 2492637 - G 71 -4.8 -4.57073 | GATCCCTGTTAAAAA GGCA GTCAA TGCC GCAGAAATCATGATC TERM 3295 2493472 - 2493498 + g 71 -5.2 -4.59773 | opp_overlap 2493468 AACATTAAGGATTTT CCAATTTTTTGT AAA ACAACAAATAGG TTTTTAAACATCAAG TERM 3296 2493771 - 2493740 - R 82 -9.7 -3.58329 | overlap 2493762 TAAATATTGCGCAAA CTATCAAAACTTA AGTAAA TAAGTCTTGATAG TCACGACAGGTAAGC truC 2494571 - 2493792 - | tRNA pseudouridine synthase C TERM 3297 2494537 - 2494498 - G 75 -10 -3.20723 | TGCCTATCAAGCCAA CTGCGGTGAACAAGCCAG CCCG CCGGTTTATTCACCGCCA CAAGATATTCATCTT PMI2294 2494903 - 2494580 - | hypothetical protein TERM 3298 2494995 - 2494974 - R 100 -13.1 -4.95487 | opp_overlap 2494978 AAAACAAATAGAAAA TAAAGGGGC CGTA GCCCCTTTA GACAAGAAGATATGA TERM 3299 2494978 - 2494991 + r 80 -9.5 -3.53091 | opp_overlap 2494974 CAAATAGAAAATAAA GGGGC CGTA GCCCC TTTAGACAAGAAGAT syd 2495925 - 2495377 - | SecY-interacting protein queF 2496089 - 2496934 + | NADPH-dependent 7-cyano-7-deazaguanine reductase TERM 3300 2497769 - 2497779 + G 73 -6.8 -4.20868 | AGCTTTTGTTCGTAT TGCC CAC GGCA TTATTATTTTCCCAG PMI2297 2497026 - 2498393 + | amino acid decarboxylase xni 2498400 - 2499149 + | exodeoxyribonuclease IX TERM 3301 2499193 - 2499165 - T 93 -8.2 -5.1963 | opp_overlap 2499165 2499163 TTTAATCAATAAAAA GGCTAACGCTCT GTAAT AGAGAATTAGCC TGTTAATGATTTACT PMI2299 2500335 - 2499238 - | hypothetical protein PMI2300 2500723 - 2500328 - | hypothetical protein TERM 3302 2500695 - 2500683 - G 88 -2.6 -6.02914 | GCCACATAAAAAAAA CCAC TGATT GCGG AAAACATAAGCAATG gcvA 2501687 - 2500767 - | glycine cleavage system transcriptional activator (LysR-family transcriptional regulator) TERM 3303 2501410 - 2501426 + g 70 -8.7 -3.29584 | overlap 2501409 2501411 2501420 ACTGTTAAAGCCCCT TTTGCGC TTC GCGCAAG TAATTTTCTTGTCGC TERM 3304 2501411 - 2501425 + g 72 -10 -2.57028 | overlap 2501410 2501409 2501420 CTGTTAAAGCCCCTT TTGCGC TTC GCGCAA GTAATTTTCTTGTCG TERM 3305 2501896 - 2501912 + H 90 -10.9 -3.93963 | TTGTGTTTGCAAGTT GTCTGGA AAT TCCAGAC TTTGTAGCTGATGCT TERM 3306 2501916 - 2501929 + H 79 -6.7 -4.56715 | GAAATTCCAGACTTT GTAGC TGAT GCTAC TGTTTTTTTTCACTT TERM 3307 2502003 - 2501984 - H 77 -9.2 -3.33671 | opp_overlap 2501985, overlap 2501985 ATAGTGATTTTATAA TGCACCGC CAAG GCGGTGCT TTTTTTATATATAAT TERM 3308 2502002 - 2501985 - H 95 -12.7 -2.59881 | opp_overlap 2501985, overlap 2501984 TAGTGATTTTATAAT GCACCGC CAAG GCGGTGC TTTTTTTATATATAA TERM 3309 2501985 - 2502002 + H 100 -12.7 -5.76633 | opp_overlap 2501985 2501984 TAGTGATTTTATAAT GCACCGC CAAG GCGGTGC TTTTTTTATATATAA csdA 2502339 - 2503553 + | cysteine sulfinate desulfinase TERM 3310 2503892 - 2503869 - g 78 -7.6 -4.32579 | opp_overlap 2503869 AGACGGCACAAGAAA TAGCCAATAT CGAT ATATTAGCTA TTTTTGAACAATTAG TERM 3311 2503869 - 2503892 + G 73 -5.4 -4.59853 | opp_overlap 2503869 AGACGGCACAAGAAA TAGCCAATAT CGAT ATATTAGCTA TTTTTGAACAATTAG PMI2303 2503556 - 2503999 + | cysteine desulfuration protein PMI2304 2504918 - 2504070 - | hypothetical protein TERM 3312 2504201 - 2504182 - G 80 -10 -3.69699 | overlap 2504178 ATAAAACCAAAGGAA GCGGTAAC CATT GTCACCGC GCCAAAACCCGCTGA TERM 3313 2504949 - 2504979 + r 73 -9.1 -2.95111 | opp_overlap 2504950 2504951 2504953, overlap 2504948 TAGATAGCAGAAATA ATCATGGCTATTG TTAAT CAATAGCCATGGC GTTTGCTCATTTTAC TERM 3314 2504978 - 2504950 - R 91 -10.4 -4.13973 | opp_overlap 2504949 2504948, overlap 2504951 2504953 AGATAGCAGAAATAA TCATGGCTATTG TTAAT CAATAGCCATGG CGTTTGCTCATTTTA TERM 3315 2504977 - 2504951 - R 100 -13.9 -3.07299 | opp_overlap 2504949 2504948, overlap 2504950 2504953 GATAGCAGAAATAAT CATGGCTATTG TTAAT CAATAGCCATG GCGTTTGCTCATTTT TERM 3316 2504975 - 2504953 - R 83 -10.7 -3.08206 | opp_overlap 2504949 2504948, overlap 2504951 2504950 TAGCAGAAATAATCA TGGCTATTG TTAAT CAATAGCCA TGGCGTTTGCTCATT mltA 2506121 - 2505027 - | membrane-bound lytic murein transglycosylase TERM 3317 2506850 - 2506799 - R 78 -6.8 -4.40692 | overlap 2506800 GGTAAAAAATAATAA GTTGTTACCTCTAGTAGAAAATAA CTAT TTATTTCCCACTAGAAGTCTCAAA AATAAGTTGTAGTTG TERM 3318 2506849 - 2506800 - R 83 -10.3 -3.22788 | overlap 2506799 GTAAAAAATAATAAG TTGTTACCTCTAGTAGAAAATAA CTAT TTATTTCCCACTAGAAGTCTCAA AAATAAGTTGTAGTT amiC 2508138 - 2506876 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor argA 2508383 - 2509717 + | amino-acid acetyltransferase TERM 3319 2509765 - 2509739 - T 93 -6.6 -5.46129 | opp_overlap 2509734 2509739 TAATAAAGTAAAAAA GACAGGCTCC CCCTCTC AAAGCCTGTC TTTTGCTATTTACTA recD 2511732 - 2509816 - | exodeoxyribonuclease V alpha chain recB 2515363 - 2511725 - | exodeoxyribonuclease V beta chain TERM 3320 2513979 - 2513966 - G 74 -5.3 -4.78149 | TTTAGAACGTAAAAA CAGTT TATT AACTG CACTTACCATACCCG TERM 3321 2514682 - 2514700 + g 74 -3.8 -5.0538 | overlap 2514686 CAATGACTGCTTGAT GACGCTGT TCA ACAGTCTC TTTTTTAGCGTCGAA TERM 3322 2514867 - 2514839 - G 77 -10.3 -3.27051 | overlap 2514837 AGAAAGGGGATAACA GTGCCTGCGCCAA AAA TCAGCGCAAACAC GTTTTTTTAACTCAT TERM 3323 2515287 - 2515305 + g 100 -14.6 -3.72576 | TTCCCTGTTCCCGCA GACGCCTC AAT GAGGCGTC TTTGATACAAAGGAA ptrA 2518248 - 2515360 - | protease III precursor TERM 3324 2516562 - 2516572 + g 72 -3.2 -5.10461 | CTTGCTGTTTAACTG TGCG ATC TGCA TTTTTATTCACTAAA TERM 3325 2517436 - 2517469 + g 81 -5.4 -5.07486 | overlap 2517439 TTTTTCTTTTTCTGT CATCGCAGGCACC-GT CGTT ACTGGTGCTTG-GGTG TTTTTATTAGGAATA TERM 3326 2517439 - 2517467 + g 71 -6 -4.16307 | gap 1, overlap 2517436 TTCTTTTTCTGTCAT CGCAGGCACC-GT CGTT ACTGGTGCTTGGG TGTTTTTATTAGGAA TERM 3327 2517882 - 2517904 + g 75 -2.6 -5.27335 | TGCGGTAAGTGGTTG TGCTGGCGTT ATG AGAGCCACCA TTTTTATTTAAAAAC TERM 3328 2518040 - 2518059 + g 95 -8.6 -5.36441 | opp_overlap 2518039 ACAGGCAGAGCAACG GCGGTTAA TGAT TTGACCGC TTTTTTATCTGAAAC recC 2521641 - 2518264 - | exodeoxyribonuclease V gamma chain TERM 3329 2518657 - 2518646 - G 70 -3.6 -4.91109 | TTTCTACCATAAAAA CGGC TTTC GCCA GTTCCACCACTTAAG TERM 3330 2519865 - 2519846 - G 76 -2.2 -5.42259 | gap 1, overlap 2519847 2519849 TCAGTGTCAAAAAAA GCATCAACA AGC TGTTGAC-C GATATCAAGCCACTC TERM 3331 2520521 - 2520543 + g 85 -2.8 -5.82316 | gap 1, opp_overlap 2520520 2520521, overlap 2520521 2520522 2520524 TGAAAGGTCAAAGAG C-GATCATC ATTGGC GATGATCCG TTTTTTTTCACTACT PMI2312 2521941 - 2521657 - | hypothetical protein PMI2313 2522440 - 2521982 - | hypothetical protein ppdB 2523075 - 2522437 - | prepilin peptidase dependent protein B precursor ppdA 2523548 - 2523069 - | prepilin peptidase dependent protein A precursor TERM 3332 2523746 - 2523717 - R 100 -12.3 -4.8048 | opp_overlap 2523717, overlap 2523698 TTTTGATATCAAAAA CCCCCAATAATTA AATT CAACTATTGGGGG TCACTTCAAAGGTTC TERM 3333 2523717 - 2523746 + r 74 -9.4 -2.53213 | opp_overlap 2523698 2523717 TTTTGATATCAAAAA CCCCCAATAATT AAATTC AACTATTGGGGG TCACTTCAAAGGTTC PMI2316 2524707 - 2523778 - | hypothetical protein PMI2317 2525233 - 2524700 - | hypothetical protein TERM 3334 2525254 - 2525266 + r 74 -6.2 -4.45187 | opp_overlap 2525253 2525250, overlap 2525250 2525243 CCTCTACTAAATCAC CCCC AACGA GGGG TTATTTTGTATATTT TERM 3335 2525328 - 2525315 - R 71 -5.2 -4.65722 | opp_overlap 2525315 2525315, overlap 2525297 2525325 2525326 TGATATACAAATAAA CCCC AATAAA GGGG GTGTTTTGTATATCA TERM 3336 2525351 - 2525326 - R 70 -8.4 -3.1314 | gap 1, opp_overlap 2525315 2525315 2525347, overlap 2525315 2525297 2525325 2525347 TAAACCCCAATAAAG GGGGTGTTTTG TATAT CAAAAC-CCCC AATAATTAAATTCAA TERM 3337 2525347 - 2525376 + r 82 -9.4 -3.7347 | opp_overlap 2525326 2525325 2525347 TTTTGTATATCAAAA CCCCCAATAATT AAATTC AACTATTGGGGG TTATTAAGTGTTAAA TERM 3338 2525376 - 2525347 - R 100 -12.3 -4.34402 | opp_overlap 2525347, overlap 2525326 2525325 TTTTGTATATCAAAA CCCCCAATAATTA AATT CAACTATTGGGGG TTATTAAGTGTTAAA thyA 2526261 - 2525410 - | thymidylate synthase TERM 3339 2525840 - 2525828 - G 70 -3.4 -4.91109 | CCGGGATTATAAAAA GTGA CTATC TCAC CACGATCGTCAATAC lgt 2527177 - 2526293 - | prolipoprotein diacylglyceryl transferase TERM 3340 2527042 - 2527052 + g 70 -8.2 -3.73953 | CACTGTTAGGTTTTG CCGC TCT GCGG TTTGCTAGCCATAAT ptsP 2529510 - 2527264 - | phosphoenolpyruvate-protein phosphotransferase TERM 3341 2527430 - 2527408 - G 70 -7.8 -3.63073 | TAGATGGCGCAATAA GTATTTTACC CTA GGTAAACTAC GGCCACTCATGCTTA TERM 3342 2529411 - 2529398 - G 71 -6.7 -3.97022 | opp_overlap 2529406 GCAAGATAAATAGAA CACAC ATCC GTGTG CATAGCTTGACACGT TERM 3343 2529447 - 2529477 + g 82 -6.1 -4.89393 | TCACTAATAGTTCAA GTGCTTCTGGCAG ACTCG CTGCCATAGCCAC TTTTTCTACAATTTC nudH 2530049 - 2529519 - | (di)nucleoside polyphosphate hydrolase thiB 2530319 - 2531332 + | thiamine ABC transporter, substrate-binding protein TERM 3344 2531348 - 2531370 + G 93 -12.7 -3.8186 | TGGGTAAATGGCTTA TCCCGGGGC TATGC GCCTCGGGA TTATTACTTACCGTC thiP 2531332 - 2532912 + | thiamine ABC transporter, permease protein thiQ 2532905 - 2533606 + | thiamine ABC transporter, ATP-binding protein PMI2325 2533734 - 2534186 + | POSSIBLE EXCISIONASE PMI2326 2534186 - 2534755 + | hypothetical protein polB 2534871 - 2537225 + | DNA polymerase II TERM 3345 2537283 - 2537295 + F 100 -7.7 -5.36965 | ACATAACGCCCCTTT GGTGA TAA TCACC TTTTTTCTCATCTTG TERM 3346 2538008 - 2538020 + G 79 -6.9 -4.52781 | CAAATCATGGATGGA CGCGC TGA GCGTG TTTTAATTATCGTTC TERM 3347 2538481 - 2538458 - g 75 -3 -5.3321 | opp_overlap 2538467, overlap 2538460 2538461 AATGAACAACAAAAA TATCGCCCCG TGGC CGATGCGGTA ACCATTTTGCTTTCA rapA 2537417 - 2540320 + | RNA polymerase-associated protein TERM 3348 2540330 - 2540359 + F 70 -6.4 -4.27617 | opp_overlap 2540333, overlap 2540333 CAATAATCACTGTTA AAACGGGGGAAA GCTTTA TCTCCCCCGTTA TTTTGCTGAGATATC TERM 3349 2540356 - 2540333 - f 91 -10.3 -4.12902 | opp_overlap 2540330 2540333 TAATCACTGTTAAAA CGGGGGAAA GCTTTA TCTCCCCCG TTATTTTGCTGAGAT TERM 3350 2540333 - 2540356 + F 83 -8.1 -4.25658 | opp_overlap 2540333, overlap 2540330 TAATCACTGTTAAAA CGGGGGAAA GCTTTA TCTCCCCCG TTATTTTGCTGAGAT rluA 2540382 - 2541032 + | ribosomal large subunit pseudouridine synthase A djlA 2542077 - 2541277 - | DnaJ-like chaperone protein TERM 3351 2542032 - 2542021 - G 73 -7.2 -4.12198 | CACAATGCCCCAAAA GCCG ATCC CGGC AAAACTACCGATGAT TERM 3352 2542298 - 2542315 + H 93 -4.8 -6.02919 | opp_overlap 2542298 2542300, overlap 2542300 TTATGCAGCACGAAA TACCGC ACAAGC GCGGTG TTTTTTTGTTTCTAA TERM 3353 2542300 - 2542313 + H 71 -5.2 -4.6372 | opp_overlap 2542300 2542298, overlap 2542298 ATGCAGCACGAAATA CCGC ACAAGC GCGG TGTTTTTTTGTTTCT imp 2542503 - 2544869 + | organic solvent tolerance protein TERM 3354 2545863 - 2545836 - g 81 -7 -4.74132 | opp_overlap 2545836 ATATCTTACTAAAAA GCTCGCCTATCA TGAA TGATGAGCAAGC TTATGCCAAACTACA surA 2544944 - 2546254 + | chaperone SurA protein (peptidyl-prolyl cis-trans isomerase) TERM 3355 2546279 - 2546298 + G 100 -16.4 -3.21747 | ACCCCTCGTTATCAC CCCCGGCG AACC CGCCGGGG TTGGTCCTGACCTGA pdxA 2546244 - 2547245 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 2547238 - 2548056 + | dimethyladenosine transferase TERM 3356 2548281 - 2548302 + G 70 -9.5 -2.72463 | overlap 2548283 GAAGTTCAAGGTGAA GGGGTTGTT GGTG AACAACCTC TGATTGAAGCTGGCT apaG 2548086 - 2548463 + | hypothetical protein apaH 2548466 - 2549287 + | bis(5'-nucleosyl)-tetraphosphatase TERM 3357 2549642 - 2549614 - T 91 -7.6 -5.25906 | opp_overlap 2549620, overlap 2549620 ATAAATTAATAAAAA TAAAAAGGAGAT ATTTA ATCTCCTTTTTT ATTTAAATTTTGTTA TERM 3358 2549636 - 2549620 - T 100 -6.6 -5.74684 | opp_overlap 2549620, overlap 2549614 TAATAAAAATAAAAA GGAGAT ATTTA ATCTCC TTTTTTATTTAAATT TERM 3359 2549620 - 2549636 + T 100 -6.6 -5.67283 | opp_overlap 2549614 2549620 TAATAAAAATAAAAA GGAGAT ATTTA ATCTCC TTTTTTATTTAAATT folA 2550140 - 2549655 - | dihydrofolate reductase PMI2338 2551762 - 2550554 - | transposase TERM 3360 2551129 - 2551142 + g 75 -8.1 -4.06502 | TCCGTTGAAGCCTTG CCAGC TTTC GCTGG TTTACTTTAAAACTG PMI2339 2551785 - 2552204 + | transposase TERM 3361 2552211 - 2552252 + T 87 -10.7 -3.64703 | opp_overlap 2552210 2552211, overlap 2552222 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAAAAAGAA TERM 3362 2552222 - 2552241 + T 95 -10.6 -4.18094 | opp_overlap 2552211 2552210, overlap 2552211 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG PMI2340 2553461 - 2552268 - | hypothetical protein TERM 3363 2552802 - 2552786 - G 73 -6.7 -4.20516 | TCTCCACCGAATAAA TACTATA CAT TATAGTA ACTAAATTCATTATT TERM 3364 2553541 - 2553524 - R 100 -9.9 -6.02914 | TTCATACAAAAAAAA GCCCTTA TTAC TAAGGGC TATAAATATCAAAAA PMI2341 2556822 - 2553568 - | autotransporter (serine protease) TERM 3365 2556042 - 2556057 + g 70 -2.6 -5.0538 | CATCAACAAAGGAAG GTTTAT CACC ATAGAC TTTTTTAAAGTAGAA TERM 3366 2557243 - 2557219 - R 100 -9.5 -6.13503 | opp_overlap 2557219 TAGTAATAAAAAAAA CAGTATCTTTA TTT TAAAAATACTG TTTTTATTTTAATTT TERM 3367 2557219 - 2557243 + r 100 -7.3 -5.56372 | opp_overlap 2557219 TAGTAATAAAAAAAA CAGTATCTTTA TTT TAAAAATACTG TTTTTATTTTAATTT sufI 2558702 - 2557281 - | multicopper oxidase (suppressor of ftsI) TERM 3368 2557444 - 2557457 + g 74 -4.5 -4.88736 | opp_overlap 2557444 2557445, overlap 2557445 TCTTTCCAACCAAAA TCAGC AGGC GCTGG TTTTTGTCCATCATG TERM 3369 2559020 - 2558998 - R 100 -10.7 -4.86001 | opp_overlap 2558998 ATGATGTTATAAAAA TGCCAAATC TAATC GATTTGGCA TTAGGTATGATAAAC TERM 3370 2558998 - 2559020 + r 83 -10.7 -3.14468 | opp_overlap 2558998 ATGATGTTATAAAAA TGCCAAATC TAATC GATTTGGCA TTAGGTATGATAAAC plsC 2559806 - 2559057 - | 1-acyl-glycerol-3-phosphate acyltransferase TERM 3371 2559848 - 2559831 - R 95 -11.3 -3.9461 | opp_overlap 2559831 GCGTCCTAATAATAA GTGGGTC ATAT GACCCAC TAATCTACATTGAAA TERM 3372 2559831 - 2559848 + r 86 -11.3 -2.66733 | opp_overlap 2559831 GCGTCCTAATAATAA GTGGGTC ATAT GACCCAC TAATCTACATTGAAA parC 2562828 - 2559871 - | DNA topoisomerase IV subunit A TERM 3373 2560880 - 2560891 + g 81 -3 -5.54907 | opp_overlap 2560880 GTGATAATAACTAAC CAAT GTTG ATTG TTTTTCTTTTCTGCA TERM 3374 2560942 - 2560972 + g 79 -3.4 -5.38047 | CAATTCTGTTTCATC TGAAACCGTTAA CAGCCCT TTACCGGTTTTA TTTTTTGTCTCCATC TERM 3375 2561704 - 2561684 - G 73 -6.9 -4.26871 | TAAGCGATTAATAAA CCTTTTAGA ATT TCTAAACGG CGTAATACTTTTTCT parE 2564757 - 2562862 - | DNA topoisomerase IV subunit B PMI2346 2565455 - 2564865 - | hypothetical protein icc 2566298 - 2565459 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase nudF 2567159 - 2566530 - | ADP-ribose pyrophosphatase tolC 2567373 - 2568770 + | outer membrane protein TolC precursor TERM 3376 2568800 - 2568827 + F 87 -5.6 -5.626 | gap 1, opp_overlap 2568800 CGTTAACCATCAAAA CCGCTTA-CAGTG ATA TACGGGTAAGCGG TTTTTTTATACACTA PMI2350 2569099 - 2569827 + | lipoprotein TERM 3377 2570326 - 2570306 - g 74 -4 -5.11063 | opp_overlap 2570306 AGTATCCAAGAAAAA TTGATCGA CAGAT TCGCTCAA TTGCGTGATCAATAT TERM 3378 2570431 - 2570450 + G 76 -4.3 -5.07486 | TTGTGCAGAAGAAGC CGAAGTC ACTACC GATTTCG TTTTTATTGAAGATA PMI2351 2569835 - 2570998 + | glutathionylspermidine synthase TERM 3379 2571047 - 2571073 + T 90 -10.8 -3.86015 | overlap 2571048 CTAGCATTGACCCCC TCCCCGCCCT GAGCTAA AGGGCGGGGC TTTATGGCACACCTA TERM 3380 2571048 - 2571072 + T 100 -14.3 -2.91395 | overlap 2571047 TAGCATTGACCCCCT CCCCGCCCT GAGCTAA AGGGCGGGG CTTTATGGCACACCT PMI2352 2571923 - 2571138 - | aromatic ring-opening dioxygenase TERM 3381 2572051 - 2572028 - R 100 -9.6 -5.04265 | opp_overlap 2572028 AAAAAATATGAAAAA GCCACTTAGG GAAA CTTAAGTGGC TTGAATAAGTGTGTG TERM 3382 2572028 - 2572051 + r 89 -11.8 -3.09491 | opp_overlap 2572028 AAAAAATATGAAAAA GCCACTTAGG GAAA CTTAAGTGGC TTGAATAAGTGTGTG ribB 2572752 - 2572099 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase PMI2354 2573238 - 2573552 + | hypothetical protein TERM 3383 2573568 - 2573594 + T 91 -9.4 -4.37886 | opp_overlap 2573568 TTGATAGTGTAATAA CACCCTGTGCCA CAT TCGGACAGGGTG TTTTCTCAAAAATAA TERM 3384 2573594 - 2573568 - T 82 -9.5 -3.66844 | gap 1, opp_overlap 2573568 TTGATAGTGTAATAA CACCCTGTGCCA CATT CGG-ACAGGGTG TTTTCTCAAAAATAA PMI2355 2574920 - 2573613 - | hypothetical protein TERM 3385 2573717 - 2573733 + g 70 -8.1 -3.695 | opp_overlap 2573720, overlap 2573715 2573730 AACCAATATCTTTAA TTACTGT TTT ACAGTAA TATTTACTTTTACAA PMI2356 2575873 - 2574920 - | reverse transcriptase TERM 3386 2575867 - 2575851 - G 76 -2.3 -5.50723 | CCATTAAAATAAAAA TTAAAGA CTT CCTCTAA TTTCATATTCTTTCC PMI2357 2576045 - 2575851 - | hypothetical protein TERM 3387 2575888 - 2575932 + g 100 -23.4 -4.00476 | opp_overlap 2575892 2575899, overlap 2575899 TATTCTTTCCCCCTA TATATTAGAAAGGGTGAAGA ATCTC TCTTCACCCTTTCTAATATA TTTATACTGCCTTTA TERM 3388 2575928 - 2575892 - G 100 -20.5 -2.87132 | opp_overlap 2575888 2575899, overlap 2575899 CTTTCCCCCTATATA TTAGAAAGGGTGAAGAA TCT CTCTTCACCCTTTCTAA TATATTTATACTGCC TERM 3389 2575899 - 2575921 + g 91 -12.1 -4.08111 | opp_overlap 2575899 2575892, overlap 2575888 CCTATATATTAGAAA GGGTGAAGA ATCTC TCTTCACCC TTTCTAATATATTTA TERM 3390 2575921 - 2575899 - G 93 -12.8 -4.04318 | opp_overlap 2575888 2575899, overlap 2575892 CCTATATATTAGAAA GGGTGAAGAA TCT CTCTTCACCC TTTCTAATATATTTA TERM 3391 2576057 - 2576042 - G 89 -9 -4.70169 | opp_overlap 2576041 GTACATCCAACAAAA GCACTC ATTA GAGTGC CCTTTCAATTATAAT rfaE 2577508 - 2576084 - | bifunctional protein HldE [includes: D-beta-D-heptose 7-phosphate kinase and D-beta-D-heptose 1-phosphate adenosyltransferase] glnE 2580443 - 2577609 - | glutamate-ammonia-ligase adenylyltransferase PMI2360 2581391 - 2580468 - | adenylate cyclase-like protein PMI2361 2581611 - 2582231 + | hypothetical protein TERM 3392 2582274 - 2582298 + G 79 -10.7 -3.20349 | overlap 2582267 2582272 GTGAAAATCTACCTT GTTGGTGGTGC TGT GCGCGACCAAC TATTAAATTTACCGG TERM 3393 2583287 - 2583270 - g 73 -9.9 -3.19389 | overlap 2583258 GAACGCATCGATCAA CTCGCTA TAAT TAGCGAG GCCGATGCAAGGGGA cca 2582259 - 2583482 + | multifunctional Cca protein [includes: tRNA nucleotidyltransferase; 2'-nucleotidase and 2',3'-cyclic phosphodiesterase] TERM 3394 2583520 - 2583500 - T 78 -9.1 -3.53091 | ATTGTGTGTGGCAAA TATTAAGCG TAA CGCTCAATA ATCACCCCGACGTTG folB 2583852 - 2583502 - | dihydroneopterin aldolase TERM 3395 2584162 - 2584152 - g 71 -6.8 -4.09685 | opp_overlap 2584151 TGTGACGTCCTAAAA GGGA TGA TCCC CGTTTGGCTCGCCTA PMI2364 2583957 - 2584613 + | hypothetical protein TERM 3396 2584635 - 2584657 + F 100 -7.1 -5.68438 | opp_overlap 2584635 TCCTTATTAAAAAAA GGTCATTTA TTAAC TAAGTGACC TTTTTTATTTAATAA TERM 3397 2584657 - 2584635 - f 85 -4.9 -5.52384 | opp_overlap 2584635 TCCTTATTAAAAAAA GGTCATTTA TTAAC TAAGTGACC TTTTTTATTTAATAA TERM 3398 2584860 - 2584849 - f 77 -3 -5.65496 | overlap 2584851 CATTAAAAATAAAAA TCTT AAAT AAGA TAAACTTATATAAAA TERM 3399 2585195 - 2585181 - g 80 -2.2 -5.56263 | overlap 2585183 ATTAGAAAACAAAAA TCTATT TTA AATAAA CAACCTTCTACGTGG PMI2365 2584983 - 2585681 + | demethylmenaquinone methyltransferase TERM 3400 2585934 - 2585953 + G 71 -9.4 -2.87501 | ATTAACAGATTGTTT TGTTATGG ATAC CCATAACA TGCTATTTGCTAGCC TERM 3401 2586188 - 2586198 + G 81 -6.8 -4.73864 | ATGATTTTGGCCCTG TCCC TAT GGGA TTTTCTATTCATTCA PMI2366 2585701 - 2586225 + | hypothetical protein PMI2367 2586296 - 2586694 + | hypothetical protein TERM 3402 2586722 - 2586695 - f 90 -11.4 -3.52539 | opp_overlap 2586695 2586701, overlap 2586701 CAACCCCAAGGATAA CAAAAAGCGAGG ATCA CCTCGCTTTTTC TATTCTTACTATAAT TERM 3403 2586695 - 2586722 + F 90 -11.4 -3.47383 | opp_overlap 2586695 2586701, overlap 2586701 CAACCCCAAGGATAA CAAAAAGCGAGG ATCA CCTCGCTTTTTC TATTCTTACTATAAT TERM 3404 2586701 - 2586716 + F 100 -10.4 -5.2015 | opp_overlap 2586695 2586701, overlap 2586695 CAAGGATAACAAAAA GCGAGG ATCA CCTCGC TTTTTCTATTCTTAC TERM 3405 2586716 - 2586701 - f 100 -10.4 -5.24416 | opp_overlap 2586701 2586695, overlap 2586695 CAAGGATAACAAAAA GCGAGG ATCA CCTCGC TTTTTCTATTCTTAC aroH 2586754 - 2588160 + | phospho-2-dehydro-3-deoxyheptonate aldolase gcp 2589252 - 2588230 - | O-sialoglycoprotein endopeptidase rpsU 2589595 - 2589810 + | 30S ribosomal subunit protein S21 TERM 3406 2589864 - 2589889 + F 100 -13.3 -3.8917 | opp_overlap 2589863 2589864 AGTCGCAGTTAAAAG GCCGTGCTTTC TTAT GAGAGCGCGGC TTATTCTCGTTCAAC TERM 3407 2589889 - 2589864 - f 74 -8.9 -3.10775 | opp_overlap 2589864, overlap 2589863 AGTCGCAGTTAAAAG GCCGTGCTTTC TTAT GAGAGCGCGGC TTATTCTCGTTCAAC TERM 3408 2590287 - 2590268 - g 74 -5 -4.77867 | ACATATAAGACAAAA TCTCTATC AAGT GATGGAGA AATTGAATCAGTATT TERM 3409 2591364 - 2591376 + G 70 -2.6 -5.13741 | AATACAGAAAAAATA GCGG GTTTA TCGC TTTTTATTGAATTAG dnaG 2589924 - 2591672 + | DNA primase TERM 3410 2593001 - 2592991 - g 76 -6.8 -4.41047 | ATCGGTGAAGCAAAA GCAC GCC GTGC GAAAAAAGAGATGGT TERM 3411 2593679 - 2593657 - g 74 -6.2 -4.44548 | overlap 2593651 2593659 CAGATTGAAGCAAAA GCGTTGCGTA AAT TACGCCACCC AAGCCGTTCTGAAGT rpoD 2591863 - 2593719 + | RNA polymerase sigma-70 factor TERM 3412 2593751 - 2593769 + F 100 -14.6 -5.60689 | opp_overlap 2593751 TGGTAGTAATACAAA CGCCTGTG ACT CACAGGCG TTTTTTATTATCTGG TERM 3413 2593769 - 2593751 - f 100 -14.6 -4.23674 | opp_overlap 2593751 TGGTAGTAATACAAA CGCCTGTG ACT CACAGGCG TTTTTTATTATCTGG TERM 3414 2594207 - 2594226 + F 100 -7.9 -5.4251 | opp_overlap 2594207 AAATCAGCATATTAA GCCACTT CTTAGT AAGTGGC TTTTTTGTATCTAAG PMI2373 2594655 - 2595410 + | DNA-binding protein TERM 3415 2595430 - 2595444 + F 81 -2.9 -5.76949 | opp_overlap 2595430 ATGGACAAAAACAAA CTTAA AAATC TTAAG TTTTTTTTGAAAATA TERM 3416 2595848 - 2595863 + G 74 -6.2 -4.45765 | overlap 2595856 ATTTAGTTTATTAGG TATTGC TATC GCAATA TTTCTTGGTTTTAGA PMI2374 2595666 - 2596583 + | hypothetical protein TERM 3417 2596634 - 2596610 - T 100 -13 -5.88476 | opp_overlap 2596610 AAAACAAATAAAAAA GGCAGTGTTA ATTAA TAACACTGCC TTTTTTATTAATAAT TERM 3418 2596610 - 2596634 + T 100 -13 -5.52023 | opp_overlap 2596610 AAAACAAATAAAAAA GGCAGTGTTA ATTAA TAACACTGCC TTTTTTATTAATAAT PMI2375 2596844 - 2596665 - | hypothetical protein TERM 3419 2596779 - 2596802 + g 74 -4.6 -4.89477 | overlap 2596770 2596769 TCCGATTTGTTGATA CCAACGAG CTTTATTT TTCGTTGG TTTTATTGTTAAAAA PMI2376 2597829 - 2596822 - | cytochrome bd ubiquinol oxidase subunit II PMI2377 2599181 - 2597829 - | cytochrome bd ubiquinol oxidase, subunit I TERM 3420 2598534 - 2598546 + g 80 -6.3 -4.68539 | AGAAAACATTTTTCG TACAG GTG CTGTA TTTTGTCCTTTTAAT TERM 3421 2599423 - 2599398 - H 81 -4.1 -5.68489 | GAGAACAACAAAAAA TCATTACGTAA TAAA TCACATAACGA TACCATGGTAGCCAA TERM 3422 2599487 - 2599471 - H 70 -8.1 -3.08991 | opp_overlap 2599471 2599474, overlap 2599470 ATTTTTTCAATAAAT CAAGTTT AAA AAACTTG TCCATTAGCGTATTA TERM 3423 2599717 - 2599680 - H 82 -9.5 -3.57651 | opp_overlap 2599688 2599692, overlap 2599681 TTGCAGATTATATAA CTTTAATACCAATAAAT TATT ATTTATTGGTATTAACA AGTCTAAATATATCC TERM 3424 2599716 - 2599681 - H 82 -10.8 -2.74269 | opp_overlap 2599688 2599692, overlap 2599680 TGCAGATTATATAAC TTTAATACCAATAAAT TATT ATTTATTGGTATTAAC AAGTCTAAATATATC TERM 3425 2599688 - 2599709 + H 74 -8.9 -3.03771 | opp_overlap 2599681 2599680, overlap 2599692 TATATAACTTTAATA CCAATAAAT TATT ATTTATTGG TATTAACAAGTCTAA cbbbC 2599844 - 2602129 + | probable molybdopterin-containing oxidoreductase TERM 3426 2602188 - 2602156 - T 100 -7.2 -5.80951 | gap 1, opp_overlap 2602160, overlap 2602160 ACGCAAAACAAAAAA CAAAGGCGAGCTATT TATT AATA-CTCGCCTTTT TATCTCTATCCATCT TERM 3427 2602160 - 2602184 + T 91 -8 -5.07275 | gap 1, opp_overlap 2602160 2602156 AAAACAAAAAACAAA GGCGAGCTATT TATT AATA-CTCGCC TTTTTATCTCTATCC TERM 3428 2602184 - 2602160 - T 93 -8 -5.29208 | gap 1, opp_overlap 2602160, overlap 2602156 AAAACAAAAAACAAA GGCGAGCTATT TATT AATA-CTCGCC TTTTTATCTCTATCC PMI2379 2603101 - 2602202 - | LysR-family transcriptional regulator TERM 3429 2603283 - 2603256 - R 100 -7.1 -6.37666 | opp_overlap 2603256 ATAAAATAAAAAAAA CTCACCCTAAT ATTTCA ACTAAGGTGAG TTTATTTTTACTAAA PMI2380 2604858 - 2603326 - | methyl-accepting chemotaxis protein PMI2381 2606570 - 2605002 - | methyl-accepting chemotaxis protein TERM 3430 2605866 - 2605856 - G 74 -4 -5.07567 | TGACACGGGAAAAAA GTTT ACC AAAC TCATCATTTTTTACT TERM 3431 2606143 - 2606115 - G 84 -10.5 -3.91984 | opp_overlap 2606115 2606114 2606136 2606137 ATATTTTTCAAATAA TTGATCAAGATGT TCA AAATCTTGATCAA ATTGATTAGCTTTTA TERM 3432 2606115 - 2606143 + g 72 -10.5 -2.6652 | opp_overlap 2606115, overlap 2606114 2606136 2606137 ATATTTTTCAAATAA TTGATCAAGATGT TCA AAATCTTGATCAA ATTGATTAGCTTTTA TERM 3433 2606669 - 2606683 + H 73 -4.4 -5.00895 | ACTAGGTCATTGATT TTTATT TTA AATAAA TTTTTATATCATAAA TERM 3434 2606721 - 2606707 - H 74 -5.8 -4.58946 | opp_overlap 2606707 TCATAAACAAAATAA GTTATT TTT AATAAC TGCTATAATTATTAG TERM 3435 2606883 - 2606865 - H 75 -2.5 -5.65496 | overlap 2606866 GATTAAAAATAAAAA CCTTATT TTTTC AATAAGA TACTGATGATACTAT PMI2382 2606971 - 2607651 + | phosphotransferase/phosphoserine phosphatase TERM 3436 2607695 - 2607667 - T 100 -14.8 -4.96848 | opp_overlap 2607671, overlap 2607671 GTGTTTATATAAAAA TAAAGCGGGAAA CGTAT TTTCCCGCTTTA TCCATAAACTAACTA TERM 3437 2607671 - 2607691 + T 90 -11.2 -3.92373 | opp_overlap 2607671 2607667 TTATATAAAAATAAA GCGGGAAA CGTAT TTTCCCGC TTTATCCATAAACTA TERM 3438 2607691 - 2607671 - T 100 -11.2 -5.01422 | opp_overlap 2607671, overlap 2607667 TTATATAAAAATAAA GCGGGAAA CGTAT TTTCCCGC TTTATCCATAAACTA terE 2608323 - 2607748 - | tellurite resistance protein TERM 3439 2608272 - 2608247 - G 72 -8.3 -3.60627 | opp_overlap 2608244 2608247 GCATCCCATCCTAAA CCAACCATAGC CACC GTCATGGTTGG TGCTTCTTTAGTTAG TERM 3440 2608374 - 2608351 - R 71 -6.8 -4.15222 | opp_overlap 2608351 ACTGTGTTGAATAAA CTGACAATTA GGAA TAACTGCCAG TAATTTGTGATTTCA terD 2608978 - 2608400 - | tellurite resistance protein terC 2610071 - 2609046 - | tellurite resistance protein terB 2610561 - 2610106 - | tellurite resistance protein terA 2611728 - 2610586 - | tellurite resistance protein terZ 2612313 - 2611729 - | tellurite resistance protein TERM 3441 2612395 - 2612379 - H 83 -8.1 -4.20211 | AATACAAATTATAAA TCATCAT ATC ATGATGA AGTAGTTCGGCAAGT PMI2389 2612706 - 2613851 + | hypothetical protein PMI2390 2613844 - 2614614 + | hypothetical protein PMI2391 2614617 - 2615693 + | hypothetical protein TERM 3442 2616470 - 2616484 + G 75 -10 -3.17075 | CAGTCTGATCATTCC GATGCG TTG CGCATC TTAAATTCAACACAA PMI2392 2615693 - 2616637 + | ATP/GTP-binding protein TERM 3443 2617060 - 2617048 - g 71 -4.9 -4.64861 | GTGTTTTAAAAGAAA TAAGA GAG TCTTA TAGTGCTGAAATTAA terW 2616912 - 2617379 + | tellurium resistance protein TERM 3444 2617387 - 2617434 + T 74 -6 -4.66163 | gap 1, opp_overlap 2617394 2617399, overlap 2617389 2617394 2617399 AAAAATAAATAGGGT AATTATATGAAATAACTTGGTAT TTA ATATCGAGTTATTTCAT-TGATA TTTTTCAATAACCCT TERM 3445 2617389 - 2617432 + T 79 -8.6 -3.94812 | gap 1, opp_overlap 2617394 2617399, overlap 2617387 2617394 2617399 AAATAAATAGGGTAA TTATATGAAATAACTTGGTAT TTA ATATCGAGTTATTTCAT-TGA TATTTTTCAATAACC TERM 3446 2617394 - 2617428 + T 100 -13.2 -3.61527 | opp_overlap 2617394 2617399, overlap 2617389 2617387 2617399 AATAGGGTAATTATA TGAAATAACTTGGTAT TTA ATATCGAGTTATTTCA TTGATATTTTTCAAT TERM 3447 2617428 - 2617394 - T 71 -8.8 -2.92018 | opp_overlap 2617389 2617387 2617394 2617399, overlap 2617399 AATAGGGTAATTATA TGAAATAACTTGGTAT TTA ATATCGAGTTATTTCA TTGATATTTTTCAAT TERM 3448 2617399 - 2617423 + T 74 -7.3 -4.02979 | opp_overlap 2617399 2617394, overlap 2617394 2617389 2617387 GGTAATTATATGAAA TAACTTGGTAT TTA ATATCGAGTTA TTTCATTGATATTTT PMI2394 2617921 - 2617514 - | TonB-like protein PMI2395 2618731 - 2618018 - | NUDIX-family hydrolase TERM 3449 2618870 - 2618827 - H 71 -8.3 -3.272 | overlap 2618846 2618848 ATGACTTGACACCAA TAGTGTCCATAAGACAATA TACTGT TAATGTCATAAGGACACTA ACTGGAGAACACTAT PMI2396 2618884 - 2619900 + | hypothetical protein PMI2397 2619904 - 2620848 + | hypothetical protein tetRJ 2621468 - 2620845 - | tetracycline repressor protein TERM 3450 2621544 - 2621500 - H 100 -16.8 -3.31515 | opp_overlap 2621499 2621500 AAATATTCTTGACAA TCTATCACTGATAGAGATAT TTTTC ACCTCTCTATCAGTGATAGA TTTTTAGGATATTTA TERM 3451 2621500 - 2621544 + H 100 -14.7 -4.6856 | opp_overlap 2621500, overlap 2621499 AAATATTCTTGACAA TCTATCACTGATAGAGA TATTTTTCACC TCTCTATCAGTGATAGA TTTTTAGGATATTTA tetAJ 2621559 - 2622755 + | tetracycline resistance protein (MFS-family transporter) TERM 3452 2622777 - 2622815 + T 91 -10.5 -3.99324 | opp_overlap 2622775 2622783 TGTCATTAAACAGGT TGAAGATCAAGACTG GCTTCCTTG CAGACTTGATCTTCA TTTATCGTGATAAAC PMI2400 2623327 - 2623022 - | phage lysis protein (holin) TERM 3453 2623616 - 2623665 + H 79 -6.6 -4.7373 | overlap 2623619 TTTATACTAGTAACT TTGTTCGGTTATTGTCGGTTAA TGGTGT TTAACCGAGGTTAACCGAATTA TTTTTAGTCAAATAA TERM 3454 2623619 - 2623662 + H 95 -10.5 -4.47707 | overlap 2623616 ATACTAGTAACTTTG TTCGGTTATTGTCGGTTAA TGGTGT TTAACCGAGGTTAACCGAA TTATTTTTAGTCAAA TERM 3455 2624050 - 2624028 - g 79 -3.4 -5.38249 | overlap 2624030 AGCAATGATAAAAAA TCTCTCGCCA CAG CAACGAGAAA AAGCCTTAACCTTGT PMI2401 2623819 - 2624079 + | hypothetical protein TERM 3456 2624342 - 2624313 - f 91 -11.7 -3.56099 | opp_overlap 2624313 CAGAATTTGTCGAAA TCTTATGTAACAG CATT CTGTTACATAAAA TTTCAATACAAGTTT TERM 3457 2624313 - 2624342 + F 82 -9.5 -3.66095 | opp_overlap 2624313 CAGAATTTGTCGAAA TCTTATGTAACAG CATT CTGTTACATAAAA TTTCAATACAAGTTT dhaK 2624374 - 2625438 + | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaL 2625471 - 2626103 + | PTS-dependent dihydroxyacetone kinase, ADP-binding subunit TERM 3458 2626823 - 2626847 + G 71 -6.6 -4.08064 | gap 1 ATGAGGCTATTGATG CCTT-TTTAGC ACTG GCTAAACAAGG TTTTGGCGAAGCATT dhaM 2626135 - 2627583 + | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit [includes: phosphocarrier protein Hpr and phosphotransferase enzyme IIa component] TERM 3459 2627616 - 2627597 - T 90 -12.2 -3.17571 | opp_overlap 2627597 2627600, overlap 2627600 AATGTGCTAATGCAA TAAGCGCC AAAT GGCGCTTA TTGATAACTATCAAA TERM 3460 2627597 - 2627616 + T 90 -12.2 -3.20382 | opp_overlap 2627597 2627600, overlap 2627600 AATGTGCTAATGCAA TAAGCGCC AAAT GGCGCTTA TTGATAACTATCAAA TERM 3461 2627613 - 2627600 - T 82 -9.5 -3.73068 | opp_overlap 2627597 2627600, overlap 2627597 GTGCTAATGCAATAA GCGCC AAAT GGCGC TTATTGATAACTATC TERM 3462 2627600 - 2627613 + T 82 -9.5 -3.74361 | opp_overlap 2627600 2627597, overlap 2627597 GTGCTAATGCAATAA GCGCC AAAT GGCGC TTATTGATAACTATC pgtA 2628904 - 2627627 - | phosphoglycerate transport system transcriptional regulator pgtB 2631245 - 2628882 - | phosphoglycerate transport system sensor kinase TERM 3463 2629209 - 2629233 + g 79 -10.9 -3.19192 | AACTAAGACCTGCTC TATTTGTGTTG GAT CAGCACAAATA TTCAGTTCACTGGGG TERM 3464 2629390 - 2629375 - G 70 -3.3 -4.83615 | GATTTTTTAGAAAAA TTACG TAATGC CGTAA TGATCCTATTCATAC TERM 3465 2630103 - 2630088 - G 71 -6 -4.14243 | opp_overlap 2630088 2630088, overlap 2630089 CATTTGACGCCAAAA GCGCCG CAAA CGGCGA CTTAATAATCCAATT TERM 3466 2630102 - 2630089 - G 72 -9.5 -3.08224 | opp_overlap 2630088 2630088, overlap 2630088 ATTTGACGCCAAAAG CGCCG CAAA CGGCG ACTTAATAATCCAAT TERM 3467 2631221 - 2631195 - G 71 -6.6 -4.01419 | overlap 2631201 GAGTAACGAACTAAA GATAAACGCC AAATAAA GGCGTCTACC GAGTTTGCCCGATTG pgtC 2632601 - 2631315 - | phosphoglycerate transport system, substrate-binding/regulatory protein TERM 3468 2632559 - 2632521 - G 79 -10.5 -3.47322 | CGTCAGTATAACCAA TGGCTGCTCATCACT TTTTGCTGG AGTGATAAACAGCCA ACTAAATAATAGTAT PMI2408 2632914 - 2634251 + | MFS-family transporter TERM 3469 2634269 - 2634292 + F 73 -8.2 -3.53091 | opp_overlap 2634271, overlap 2634265 2634271 AATTAAGTTGTTATC AAGGGATACT TTTC AGTATCCCTC TTTAAAAAAGAGAAT TERM 3470 2634290 - 2634271 - f 84 -10.8 -3.15579 | opp_overlap 2634265 2634269 2634271 TTAAGTTGTTATCAA GGGATACT TTTC AGTATCCC TCTTTAAAAAAGAGA TERM 3471 2634271 - 2634290 + F 85 -10.8 -3.34398 | opp_overlap 2634271, overlap 2634265 2634269 TTAAGTTGTTATCAA GGGATACT TTTC AGTATCCC TCTTTAAAAAAGAGA PMI2409 2634314 - 2635765 + | pyruvate kinase TERM 3472 2635844 - 2635864 + F 100 -8.3 -5.65496 | opp_overlap 2635833 TATAGCCAATTATTT TAGCCACAT GGA ACGTGGCTA TTTTTCTTTTTAATG PMI2410 2635986 - 2636252 + | zinc-finger TERM 3473 2636312 - 2636277 - T 88 -6.2 -5.36441 | opp_overlap 2636277 TTCTTATACAAAAAA CTGTACCTTATGTAAG CTTA CTCAATCAAGGTACAG TTTATTTTATTCAAT PMI2411 2638075 - 2636339 - | pyridoxal-dependent decarboxylase TERM 3474 2636690 - 2636678 - G 73 -7.7 -3.83724 | opp_overlap 2636677 ATCATATAATTTAAA CCCAA CAC TTGGG CCTTGGTTTTGAGGC TERM 3475 2637693 - 2637661 - G 74 -6.5 -4.33819 | opp_overlap 2637666, overlap 2637664 AGTATTCACAATAAA CCATATTAGGATT GCCCATT AATCCTAATATTG AGCCATAAACACCCG TERM 3476 2638847 - 2638810 - R 70 -8 -3.16191 | gap 1, opp_overlap 2638814 2638818, overlap 2638812 2638814 2638818 TGAGATGGGGATTAA TACATAAAGCGGGAAAA GTACT CCTTCCCGCTTTAT-TA ATTAGAATTCGACCT TERM 3477 2638846 - 2638812 - R 72 -8.7 -3.14229 | opp_overlap 2638814 2638818, overlap 2638810 2638814 2638818 AGATGGGGATTAATA CATAAAGCGGGAAAA GTACT CCTTCCCGCTTTATT AATTAGAATTCGACC TERM 3478 2638844 - 2638814 - R 87 -11.3 -3.13073 | opp_overlap 2638814 2638818, overlap 2638812 2638810 2638818 ATGGGGATTAATACA TAAAGCGGGAAAA GTACT CCTTCCCGCTTTA TTAATTAGAATTCGA TERM 3479 2638814 - 2638844 + r 84 -9.9 -3.37612 | opp_overlap 2638812 2638810 2638814 2638818, overlap 2638818 ATGGGGATTAATACA TAAAGCGGGAA AAGTACTCC TTCCCGCTTTA TTAATTAGAATTCGA TERM 3480 2638818 - 2638840 + r 70 -6.3 -4.32951 | opp_overlap 2638818 2638814 2638812 2638810, overlap 2638814 GGATTAATACATAAA GCGGGAA AAGTACTCC TTCCCGC TTTATTAATTAGAAT TERM 3481 2638840 - 2638818 - R 80 -7.7 -4.22927 | opp_overlap 2638814 2638818, overlap 2638814 2638812 2638810 GGATTAATACATAAA GCGGGAAAA GTACT CCTTCCCGC TTTATTAATTAGAAT PMI2412 2640189 - 2638876 - | Mg(2+)/citrate complex transporter TERM 3482 2639470 - 2639484 + g 70 -2.8 -5.13344 | overlap 2639471 TAACAGAAGGTTGAT CCAAAA TTT TTGTGG TTTTTCTGTTCCTGT TERM 3483 2640400 - 2640384 - R 100 -10.9 -5.77988 | opp_overlap 2640384 ATAGACATAAAAAAA CCCAATG CAA CATTGGG TTTCAATTCAATTTA TERM 3484 2640384 - 2640400 + r 90 -10.9 -3.79481 | opp_overlap 2640384 ATAGACATAAAAAAA CCCAATG CAA CATTGGG TTTCAATTCAATTTA deoD 2641150 - 2640434 - | purine nucleoside phosphorylase TERM 3485 2641222 - 2641193 - R 100 -14.5 -3.84587 | ACTATTCAAATATAA TTCGGTAGACATA TTGC TATGCCTACCGAA GTAAAATTAAAACAT deoB 2642455 - 2641229 - | phosphopentomutase deoA 2643844 - 2642522 - | thymidine phosphorylase TERM 3486 2642831 - 2642848 + g 74 -6.3 -4.4522 | gap 1, opp_overlap 2642833 TACAGGCTTACTTAA TACC-GCC GTT GGCAGGTA TTTATTGTAGTTTTC TERM 3487 2643898 - 2643875 - R 73 -8.1 -3.38768 | opp_overlap 2643875, overlap 2643876 TTATAGCATTGATAA CGCCCACCC ATTGTA GGGTAGGCA TACTTCATAAATGAA TERM 3488 2643897 - 2643876 - R 74 -9.4 -2.6294 | opp_overlap 2643875, overlap 2643875 TATAGCATTGATAAC GCCCACCC ATTGTA GGGTAGGC ATACTTCATAAATGA deoC 2644693 - 2643914 - | deoxyribose-phosphate aldolase TERM 3489 2644674 - 2644658 - G 79 -10.1 -3.49176 | overlap 2644656 TAAATCCATCAAAGA CAGCGCA AGG CGCGCTG CAGCGGTTAAATCTG PMI2417 2644863 - 2644690 - | hypothetical protein TERM 3490 2644996 - 2644979 - R 74 -7.1 -3.97911 | opp_overlap 2644978 ACTAAAGACATTAAA TTGTGAT CAGA ATCACAA AAATTTTATTTTCTG TERM 3491 2645199 - 2645172 - R 100 -11.4 -5.59962 | opp_overlap 2645174 GAAAACAAACAAAAA GAGCAGATAAGC AATT ACCTATCTGCTC TGTAAATACTTTCTT PMI2418 2646518 - 2645217 - | Na+ dependent nucleoside transporter TERM 3492 2645414 - 2645434 + g 73 -6.9 -4.15044 | CAAATCCACACAGCG CAAAAGAGA TAA TCACTTTTG TTTGTTCAGACAAGG PMI2419 2647588 - 2646806 - | TatD-related deoxyribonuclease TERM 3493 2646925 - 2646910 - G 83 -3.2 -5.66338 | overlap 2646912 AAAGAGAAGAAAAAA CAGCGA GAAT TCGCTC AGGGCGGTTAGGCTC TERM 3494 2646923 - 2646912 - G 70 -5.8 -4.42868 | overlap 2646910 AGAGAAGAAAAAACA GCGA GAAT TCGC TCAGGGCGGTTAGGC PMI2420 2648646 - 2647585 - | patatin-like phospholipase PMI2421 2649090 - 2648743 - | phospholipid-binding protein TERM 3495 2649457 - 2649473 + r 85 -6.6 -5.06585 | opp_overlap 2649457, overlap 2649451 ATCATTGTGAAAAAA GCCATA AAAAA TATGGC TTTTTATATGATTTA TERM 3496 2649473 - 2649457 - R 85 -6.6 -5.03715 | opp_overlap 2649457 2649451 ATCATTGTGAAAAAA GCCATA AAAAA TATGGC TTTTTATATGATTTA prfC 2651088 - 2649499 - | peptide chain release factor 3 TERM 3497 2650154 - 2650142 - G 81 -5.5 -5.03715 | opp_overlap 2650146, overlap 2650146 ACCACCCGTAAAAAA GCAAC ACG GTCGC GGTGTTTGGGATCCA PMI2423 2651992 - 2651345 - | phage repressor PMI2424 2652110 - 2652361 + | phage regulatory protein TERM 3498 2652995 - 2652969 - g 100 -4.5 -6.23545 | gap 1 CGCAAAGAAAAAAAA GCGAAAGCCA AAGAAGAA TGGC-TTCGC ATGGGCCTCAATGAA PMI2425 2652417 - 2653286 + | hypothetical protein TERM 3499 2653892 - 2653874 - g 76 -6.7 -4.31587 | CTTTAAAAAGAATAA GCCCGAA AGCCA TTCAGGC GCTTCTCGGAAATCA PMI2426 2653327 - 2653935 + | hypothetical protein PMI2427 2653922 - 2654470 + | phage transglycosylase PMI2428 2654467 - 2654766 + | hypothetical protein TERM 3500 2654910 - 2654895 - g 73 -7.6 -4.06687 | overlap 2654899 AGGCTTCACAAAGAA GTGACT GGCA AGTCAC CTTGCCCTGGTCAAT TERM 3501 2654982 - 2654953 - g 86 -9.4 -4.11394 | gap 1 ATGCCATTGTTAAAA GCAGAAGAGCCTT AGTTG AAGGCTC-CCTGC TGATGGCGCTTTATG TERM 3502 2655140 - 2655120 - g 74 -3.9 -5.00884 | opp_overlap 2655119 2655120 2655124 ATCCCCTGGAAAAAA CTAACCATC AAT GAAGGTTGG GTTCTAGCTCGTGAT PMI2429 2654763 - 2655296 + | phage regulatory protein TERM 3503 2655319 - 2655335 + F 75 -8 -3.58343 | ATGCATGATTTGATT GTGCAC CGCCC GTGCAC TTTGAGAGTACTAAG PMI2430 2655354 - 2655785 + | phage membrane protein TERM 3504 2655807 - 2655783 - T 100 -7.9 -5.63857 | opp_overlap 2655782 2655785 AAAAAGCCAAAAAAA TAGCCAGCC AACCACA AGCTGGCTA CCTTCTATTTTCAGT PMI2431 2659387 - 2655818 - | pilus assembly protein TERM 3505 2658406 - 2658392 - G 70 -2.8 -5.07107 | overlap 2658394 GAAACCCTCAAAAAA CGTC ATCATCG GACG AACGATACTTTGGAA PMI2432 2660779 - 2659391 - | pilus assembly protein TERM 3506 2660755 - 2660736 - G 71 -4.2 -4.84527 | overlap 2660740 CTCATAGATGAAAAA CCAATCGC ACAG GCGATAAG CGATACTCGGAATAC PMI2433 2661726 - 2660782 - | pilus assembly PMI2434 2663906 - 2662014 - | plasmid-related helicase PMI2435 2665867 - 2663903 - | plasmid-related protein TERM 3507 2665579 - 2665566 - G 80 -2.4 -5.56568 | opp_overlap 2665568, overlap 2665568 ATATGATGAAAAAAA TCTG GTATCA CAGA GTGATCTCCATCTTC PMI2436 2666241 - 2666041 - | plasmid-related protein PMI2437 2667082 - 2666375 - | plasmid-related protein TERM 3508 2667153 - 2667166 + r 76 -9.5 -3.07443 | opp_overlap 2667153 CAAGGCGCAAAAAAA GGGGC CGAA GCCCC TTGGATCAGATATGA TERM 3509 2667166 - 2667153 - R 100 -9.5 -5.43866 | opp_overlap 2667153 CAAGGCGCAAAAAAA GGGGC CGAA GCCCC TTGGATCAGATATGA PMI2438 2668245 - 2667172 - | plasmid-related protein TERM 3510 2667289 - 2667303 + g 78 -2.8 -5.5074 | opp_overlap 2667289 GACTTGTGTCAGAAT GCCT TTTTGCC AGGC TTTTTTCTTGAGTTC TERM 3511 2668298 - 2668265 - R 93 -8.9 -4.86731 | opp_overlap 2668266, overlap 2668266 CCTCCTTAAATAAAA TGCCGACTCCTACCA CAGG TGGTAAAAGTCAGCT TAGGTCCTGCATTGA TERM 3512 2668297 - 2668266 - R 91 -12.4 -3.51557 | opp_overlap 2668266, overlap 2668265 CTCCTTAAATAAAAT GCCGACTCCTACCA CAGG TGGTAAAAGTCAGC TTAGGTCCTGCATTG PMI2439 2668678 - 2668337 - | plasmid-related protein TERM 3513 2668676 - 2668656 - G 81 -11.9 -2.77899 | opp_overlap 2668659, overlap 2668659 TTTTGTGATGAAGGA GAATGGGCA ATG CGCCCATTC ATTAAAGATAACCGC PMI2440 2669175 - 2668678 - | plasmid-related DNA repair protein TERM 3514 2668723 - 2668707 - G 70 -7.9 -3.75153 | overlap 2668688 GTTCGGCAAGCGAAA CGCAGCC CTC GGATGCG ACCACGACATGGTCA TERM 3515 2669143 - 2669160 + g 88 -2.7 -5.95286 | opp_overlap 2669138 GATGTAAGTACCGGC TTCTTCG CCAG CTAAGAA TTTTTTGTTTTTCAT TERM 3516 2669235 - 2669194 - R 100 -15.1 -5.75945 | overlap 2669180 2669205 2669208 AGTCTCCAAAAAAAA CGGAGACGAACCCATTCCC TGAA GGGGACGGAATCGTCCCCG CAGGGTGGTAAAATT PMI2441 2670913 - 2669258 - | plasmid-related protein PMI2442 2671423 - 2670983 - | plasmid-related protein TERM 3517 2671166 - 2671179 + g 70 -8.1 -3.74693 | ATATTGCATCCAGGC CCGCT CAAA AGCGG TTTGCTGCAATGCCA TERM 3518 2671486 - 2671452 - R 73 -9.2 -2.86177 | overlap 2671440 ATAGTTCAGAGGACA TGCGCCCTTCAGGGCA ACA TGCCCTCAAGGACGTT AGAAATAAAATGAGT PMI2443 2672438 - 2671485 - | plasmid-related protein TERM 3519 2672229 - 2672243 + g 74 -4.2 -5.07107 | ACCGACTTGCTCACA CAAGCG CTG CGCTTC TTTTTTAAGCCTTTC PMI2444 2673304 - 2672537 - | plasmid-related protein TERM 3520 2672780 - 2672768 - G 79 -9.1 -3.83155 | CAGTAACAGCAACAA TGGCC ACG GGCCA TCATCAGTGTTAACA PMI2445 2674263 - 2673304 - | plasmid-related ATPase TERM 3521 2674298 - 2674325 + r 83 -11.2 -2.79008 | opp_overlap 2674305, overlap 2674293 2674291 GACGAGGCCCCATGC CCCAACAGGGAC TGAA GTCCCCGTCGGG TGGTGTGTTGATTGT TERM 3522 2674318 - 2674305 - R 70 -8.1 -3.03124 | opp_overlap 2674298 2674293 2674291 CCCCATGCCCCAACA GGGAC TGAA GTCCC CGTCGGGTGGTGTGT TERM 3523 2674449 - 2674409 - R 75 -8.4 -3.68351 | opp_overlap 2674371, overlap 2674446 TGGCTACGAGTGAAA CTGCTTTCTGATGCACTC GATGT AAGCGCATTAGAAAGGAG CCGAAATCGGCTCCA TERM 3524 2674463 - 2674446 - R 100 -12.7 -3.97834 | overlap 2674409 TAAGCGCATTAGAAA GGAGCCG AAAT CGGCTCC AAGTGAACGTTAAAA PMI2446 2675489 - 2674473 - | plasmid-related protein TERM 3525 2675514 - 2675541 + r 76 -9.8 -3.15252 | TTTGAGGGGAGACTC CCCCGAAGGAGA GAAC TCCCCTTCAGGG TTAAGTGGTTACTTT PMI2447 2675693 - 2675550 - | plasmid-related protein TERM 3526 2675750 - 2675714 - R 100 -6.6 -6.07627 | gap 1, opp_overlap 2675727 ATCTCCAAAAAAAAA GACGAGACC-TTCCCCC TGAC GGGAGAATAATCCCGCC AGGGTTAGTAAAATG TERM 3527 2675727 - 2675754 + r 100 -12.7 -3.16881 | opp_overlap 2675714 AAGACGAGACCTTCC CCCTGACGGGA GAATAA TCCCGCCAGGG TTAGTAAAATGAATG PMI2448 2676595 - 2675777 - | phage recombination protein TERM 3528 2676373 - 2676387 + g 75 -10 -3.0353 | overlap 2676372 CATCGACACCTACCA CTGGGA TAA TCCCAG CTTGTTTATCAGGGA PMI2449 2677094 - 2676675 - | plasmid-related single-stranded DNA-binding protein TERM 3529 2677019 - 2676997 - G 72 -9.1 -3.30124 | CGCCATTTCTCAGAA GTGGCCAGC GAAAT GCTGGTCAC CAAATCACCTGATGG PMI2450 2677436 - 2677110 - | plasmid-related protein TERM 3530 2677507 - 2677466 - H 100 -18.9 -2.71011 | gap 1, opp_overlap 2677477, overlap 2677487 ATTGGTTTTGAAGGA GTCACC-CCCAACTGGGGAA AAC TCCCCCAGTTGGGTGGTGAA AAGGCGAACCGTAAG TERM 3531 2677477 - 2677495 + H 72 -8.8 -3.09516 | opp_overlap 2677466 2677487 AGGAGTCACCCCCAA CTGGGGAA AAC TCCCCCAG TTGGGTGGTGAAAAG PMI2451 2677804 - 2678406 + | plasmid-related protein TERM 3532 2678429 - 2678445 + F 78 -9.4 -3.26933 | opp_overlap 2678426 2678429, overlap 2678427 2678438 GGCTCCCATCAACCA GCCCCT CTCGA AGGGGC TCTTCATCTTGCTGT TERM 3533 2678445 - 2678429 - f 77 -10.1 -2.77899 | opp_overlap 2678429 2678427 2678438, overlap 2678426 GGCTCCCATCAACCA GCCCCTC TCG AAGGGGC TCTTCATCTTGCTGT PMI2452 2678515 - 2679189 + | endonuclease precursor TERM 3534 2679228 - 2679204 - T 100 -11.5 -5.31091 | opp_overlap 2679207, overlap 2679207 GATAATAAAATAAAA TAATAGGGGCA GTA TGCCCCTATTC TAGATTCCCACTAAT TERM 3535 2679225 - 2679207 - T 100 -13.2 -4.68779 | opp_overlap 2679207, overlap 2679204 AATAAAATAAAATAA TAGGGGCA GTA TGCCCCTA TTCTAGATTCCCACT TERM 3536 2679207 - 2679225 + T 100 -13.2 -3.42056 | opp_overlap 2679207 2679204 AATAAAATAAAATAA TAGGGGCA GTA TGCCCCTA TTCTAGATTCCCACT PMI2453 2679772 - 2679254 - | plasmid-related regulatory protein PMI2454 2682065 - 2679792 - | plasmid-related membrane protein TERM 3537 2681470 - 2681486 + g 71 -9.5 -2.76361 | overlap 2681469 2681482 AACACAGCCACATTT CCTGAAA TTG TTTCAGG CTTATCTGATTCGTG PMI2455 2682323 - 2682075 - | plasmid-related glycin-rich membrane protein TERM 3538 2682295 - 2682305 + g 73 -6.8 -4.25401 | CCACCAACAGCACCA GCGA CTT TCGC TTTATCTTCCATTTC TERM 3539 2682361 - 2682410 + r 80 -5.2 -5.16572 | opp_overlap 2682361 CTAACACAACAACAA TTTAGACAATTAAGTCTAACAT ATCAAC ACGTCAGACCTATTTGTCTAAA TTTTTTACGTTAAAT TERM 3540 2682410 - 2682361 - R 100 -12.5 -4.10144 | opp_overlap 2682361 CTAACACAACAACAA TTTAGACAATTAAGTCTAACATA TCAA CACGTCAGACCTATTTGTCTAAA TTTTTTACGTTAAAT TERM 3541 2682522 - 2682550 + r 90 -12.6 -3.31263 | opp_overlap 2682524 2682527, overlap 2682524 2682527 TATTTCATATCGATA TAGAAGGCTTTG CATCA CAAAGCCTTCTG TTCTAAGAGTGCGCT TERM 3542 2682548 - 2682524 - R 100 -13.7 -2.93382 | opp_overlap 2682522 2682524 2682527, overlap 2682527 TTTCATATCGATATA GAAGGCTTTGC ATC ACAAAGCCTTC TGTTCTAAGAGTGCG TERM 3543 2682524 - 2682548 + r 100 -13 -3.22475 | opp_overlap 2682524 2682527, overlap 2682522 2682527 TTTCATATCGATATA GAAGGCTTTG CATCA CAAAGCCTTC TGTTCTAAGAGTGCG TERM 3544 2682545 - 2682527 - R 82 -9.6 -3.61239 | opp_overlap 2682524 2682522 2682527, overlap 2682524 CATATCGATATAGAA GGCTTTGC ATC ACAAAGCC TTCTGTTCTAAGAGT TERM 3545 2682527 - 2682545 + r 80 -8.9 -3.75378 | opp_overlap 2682527 2682524, overlap 2682524 2682522 CATATCGATATAGAA GGCTTTG CATCA CAAAGCC TTCTGTTCTAAGAGT PMI2456 2686257 - 2682565 - | mating pair stabilization protein TERM 3546 2683525 - 2683536 + g 86 -7.2 -5.0538 | ACAGCAATCCACTAT GCCG CCAA CGGC TTTTTTGCACTGGCC PMI2457 2687288 - 2686260 - | plasmid pilus assembly PMI2458 2688399 - 2687272 - | plasmid pilus assembly protein TERM 3547 2688454 - 2688415 - R 93 -11.4 -3.73224 | CCACCTCCTACCAAA GCGGCCAAGCGCGACCAA CAAT CTGCTCGCGCTTAACGGC ATTCCAATAGCGGGA PMI2459 2688919 - 2688407 - | plasmid conjugation signal peptidase PMI2460 2689250 - 2688903 - | plasmid-related protein PMI2461 2691642 - 2689243 - | plasmid pilus assembly protein TERM 3548 2690870 - 2690848 - G 88 -8.3 -4.76041 | GACATTTAGCAAAAA GCTGCCGCG TAAAC CGCGACTGC CCGTCATCATGTCGC PMI2462 2692334 - 2691642 - | plasmid-related disulfide bond isomerase TERM 3549 2691829 - 2691839 + g 73 -2.4 -5.24129 | opp_overlap 2691829, overlap 2691811 CCATTCAGCAATGCA TCGG TGG CCGC TTTTTTGTCACGCGC PMI2463 2693404 - 2692466 - | plasmid-related protein PMI2464 2694230 - 2693397 - | plasmid-related protein TERM 3550 2693603 - 2693621 + g 74 -6 -4.38712 | overlap 2693606 GAACAGAGCTGCTTC GTTCAAGA ATA TCTTGTAC TTTTCTAGGACTAAG TERM 3551 2694322 - 2694368 + r 79 -8.2 -3.95986 | opp_overlap 2694325, overlap 2694325 GCGTTGTTGAAATGA AAAGGTCTACACAACATC ACCAATAACCC GATGTTGTGTAGACCTAG TTTGATTACCTTAAG TERM 3552 2694325 - 2694365 + r 100 -14.3 -3.03282 | opp_overlap 2694325, overlap 2694322 TTGTTGAAATGAAAA GGTCTACACAACATC ACCAATAACCC GATGTTGTGTAGACC TAGTTTGATTACCTT TERM 3553 2694365 - 2694325 - R 100 -15 -4.54727 | opp_overlap 2694325 2694322 TTGTTGAAATGAAAA GGTCTACACAACATCA CCAATAACC CGATGTTGTGTAGACC TAGTTTGATTACCTT PMI2465 2694794 - 2694408 - | plasmid-related protein PMI2466 2695441 - 2694791 - | plasmid-related protein PMI2467 2696727 - 2695438 - | plasmid pilus assembly protein TERM 3554 2695750 - 2695764 + g 71 -7.1 -3.91716 | GGCCATCATCGATTT GGCCA CCAGC TGGCC TTGTTTCGACACTAA PMI2468 2697629 - 2696730 - | plasmid-related protein PMI2469 2698236 - 2697610 - | plasmid pilus assembly protein TERM 3555 2698142 - 2698123 - G 70 -5.7 -4.38712 | GGTATTGCGAGAAAA TGCCGCT ACCGCA AGCAGCA AGTTAGATAGCACCA TERM 3556 2698162 - 2698199 + g 76 -10.7 -2.54371 | gap 1, opp_overlap 2698148 2698152 2698174, overlap 2698171 2698174 AGATAGCACCAGCAC CGCAATCAG-GAACCGTT GCC ATCGGTTCTCTAATTGCG TGCCTTGCCATGATT PMI2470 2698514 - 2698233 - | plasmid pilus assembly protein PMI2471 2698550 - 2698789 + | plasmid-related protein PMI2472 2698803 - 2699390 + | plasmid-related protein TERM 3557 2699397 - 2699423 + T 77 -8 -3.79906 | opp_overlap 2699399 2699401, overlap 2699399 2699401 AGGTTTTAGCTCTAC AAGATGAGGCCT GAC AGGCCTCATATC TTCTTCTGCAAGTGA TERM 3558 2699399 - 2699421 + T 85 -10.6 -3.48378 | opp_overlap 2699399 2699401, overlap 2699397 2699401 GTTTTAGCTCTACAA GATGAGGCCT GAC AGGCCTCATA TCTTCTTCTGCAAGT TERM 3559 2699421 - 2699399 - T 83 -10.6 -3.31144 | opp_overlap 2699397 2699399 2699401, overlap 2699401 GTTTTAGCTCTACAA GATGAGGCCT GAC AGGCCTCATA TCTTCTTCTGCAAGT TERM 3560 2699419 - 2699401 - T 100 -13.2 -3.22475 | opp_overlap 2699399 2699397 2699401, overlap 2699399 TTTAGCTCTACAAGA TGAGGCCT GAC AGGCCTCA TATCTTCTTCTGCAA TERM 3561 2699401 - 2699419 + T 100 -13.2 -3.31208 | opp_overlap 2699401 2699399, overlap 2699399 2699397 TTTAGCTCTACAAGA TGAGGCCT GAC AGGCCTCA TATCTTCTTCTGCAA PMI2473 2700061 - 2699417 - | plasmid-related protein TERM 3562 2699882 - 2699861 - G 76 -10.9 -2.61264 | opp_overlap 2699860 2699857, overlap 2699860 CTGCGTATCCACAAT CCATGACTG ATAC CAGCCATGG CTAGTTTGACCAATC PMI2474 2700599 - 2700039 - | plasmid-related protein PMI2475 2702429 - 2700609 - | plasmid conjugative transfer protein PMI2476 2704628 - 2702478 - | plasmid conjugative relaxase TERM 3563 2704803 - 2704832 + r 74 -7.3 -4.08216 | gap 1, opp_overlap 2704802 2704804, overlap 2704804 CGAGATATCCAAAAC ATG-GCTTCACATA CCC TATGTGAAGCACAA TTTTAAACAAGCTCA TERM 3564 2704804 - 2704831 + r 84 -10.8 -3.04715 | gap 1, opp_overlap 2704802 2704804, overlap 2704803 GAGATATCCAAAACA TG-GCTTCACATA CCC TATGTGAAGCACA ATTTTAAACAAGCTC TERM 3565 2704831 - 2704804 - R 89 -10.8 -3.72985 | gap 1, opp_overlap 2704804 2704803, overlap 2704802 GAGATATCCAAAACA TG-GCTTCACATA CCC TATGTGAAGCACA ATTTTAAACAAGCTC PMI2477 2707012 - 2704877 - | DNA helicase PMI2478 2713440 - 2707018 - | DNA helicase TERM 3566 2709480 - 2709459 - G 71 -7.1 -3.92522 | GTGCAAGCTCAGAAA GCGCGGCCG CTGC CGGACGCTC GTACTCAAAGGTACG TERM 3567 2709664 - 2709679 + g 70 -5.4 -4.44915 | gap 1, opp_overlap 2709657 2709666, overlap 2709664 2709666 TCGAATCAGCGCCAA C-AGCGC ATT GCGCTCG TTTTCTAACTCATTG TERM 3568 2711499 - 2711483 - G 82 -7.9 -4.49556 | opp_overlap 2711483, overlap 2711484 CGTGCAGCAAAGAAA CCCGCTC GGT GAGCGGC GTCTTGGACCGAGTC TERM 3569 2711498 - 2711484 - G 85 -11.4 -3.29252 | opp_overlap 2711483, overlap 2711483 GTGCAGCAAAGAAAC CCGCTC GGT GAGCGG CGTCTTGGACCGAGT TERM 3570 2713566 - 2713593 + r 100 -14.8 -3.11619 | overlap 2713557 GTGATTCGGCGGTTC GAGCGCCGTGGT CGAA GCCTCGGCGCTC TTGCCTACATTATTC TERM 3571 2713656 - 2713667 + r 72 -7.2 -3.8505 | opp_overlap 2713654 2713656 AACGCTCACTAAACA CCGC CCAT GCGG TTTCGTAGTCTTGCT PMI2479 2718603 - 2713633 - | plasmid-related protein PMI2480 2721569 - 2718606 - | plasmid ATP-dependent helicase TERM 3572 2719245 - 2719255 + g 70 -8.2 -3.76224 | GAGATATTGGATTTT CGGC CAA GCCG TTTGCTCACTGCGAC TERM 3573 2720990 - 2720965 - G 85 -6.9 -5.1167 | overlap 2720967 AATGGAATAGAAAAA CGGCTCCAAAA TTCT TTTTGGAACTG CGTCAACATTGATTT PMI2481 2722519 - 2721596 - | plasmid-related protein PMI2482 2723136 - 2722837 - | plasmid-related protein PMI2483 2724129 - 2723224 - | plasmid-related exonuclease umuD 2724786 - 2725235 + | DNA repair protein umuC 2725243 - 2726511 + | DNA repair protein TERM 3574 2726664 - 2726654 - g 73 -5.4 -4.62069 | overlap 2726655 2726657 TTGGCAGTCCAAAAA TGAG TAT CTCA GCTTCGTCTTTGAGA PMI2485A 2726550 - 2726720 + | plasmid-related protein PMI2486 2726717 - 2726878 + | conjugative transposon protein PMI2487 2727158 - 2727325 + | conjugative transposon protein PMI2488 2727430 - 2728404 + | plasmid-related protein TERM 3575 2728497 - 2728469 - g 76 -7.4 -4.2573 | gap 1 CAAAGAATTGGAAAA GACGC-CACCACG GGAA CGCGCTGAGCGTC TGCGGATGCTGGCCA PMI2489 2728407 - 2728676 + | plasmid-related protein PMI2490 2728678 - 2729919 + | integrase TERM 3576 2729948 - 2729927 - T 95 -8.8 -5.16132 | opp_overlap 2729927 2729931 GACAGTAAAATAAAA GAAAGAGG CTCAGT CCTCTTTC TTCTCATACTCCTCC TERM 3577 2729927 - 2729948 + T 76 -8.8 -3.45023 | opp_overlap 2729927, overlap 2729931 GACAGTAAAATAAAA GAAAGAGG CTCAGT CCTCTTTC TTCTCATACTCCTCC PMI2491 2730130 - 2729936 - | DNA-binding protein TERM 3578 2730976 - 2730990 + H 74 -8.6 -3.24694 | overlap 2730974 2730972 ATCTATTTATTCTCA GCATTG TAC CAATGC TCTGTTGTCGTTGTT TERM 3579 2731219 - 2731231 + G 81 -6.9 -4.81083 | opp_overlap 2731215 2731219, overlap 2731216 TTAGAATATGACAAG CGCGG TCG CTGCG TTTTTACTAATTCAG PMI2492 2731174 - 2731710 + | hypothetical protein PMI2493 2731700 - 2732620 + | hypothetical protein TERM 3580 2732904 - 2732885 - T 100 -5.7 -6.14618 | opp_overlap 2732885 CATAAAATAAAAAAA GACGCCT AATAGA AGACGTC TTTAATTTAACTTAA rimI 2733378 - 2732932 - | ribosomal-protein-alanine acetyltransferase holD 2733757 - 2733347 - | DNA polymerase III, psi subunit rsmC 2733887 - 2734900 + | ribosomal RNA small subunit methyltransferase C TERM 3581 2734956 - 2734925 - T 100 -12.4 -4.93296 | opp_overlap 2734923 GCACTATTATAAAAA CCGCCAGTAATTGA TTTT TCAACTACTGGTGG CCTTCGGTATTTACT PMI2497 2735292 - 2735017 - | hypothetical protein TERM 3582 2735427 - 2735401 - R 100 -8.8 -5.64421 | opp_overlap 2735401 2735402, overlap 2735402 AGGTTAAACAAAAAA CGCTTTACCGCT GCC AACGATAAAGCA TTTTAGAGTCATCAA TERM 3583 2735426 - 2735402 - R 90 -10.1 -3.97026 | opp_overlap 2735402 2735401, overlap 2735401 GGTTAAACAAAAAAC GCTTTACCGCT GCC AACGATAAAGC ATTTTAGAGTCATCA PMI2498 2736006 - 2735464 - | acetyltransferase PMI2499 2737640 - 2736003 - | Na+/Pi-cotransporter TERM 3584 2736288 - 2736308 + g 81 -11.9 -2.71364 | overlap 2736290 2736292 ATTCAGATTACTTTG CAGACGCTC AAG GAGTGTCTG TAATTCACGACGTCC TERM 3585 2737994 - 2737965 - R 100 -11.5 -5.75478 | gap 1 AATCATAGAAAAAAA CGCGACTT-GAGGG TAT CTCTCTAAGTCGCG TGAAAATACAACAAT phoA 2739508 - 2738069 - | alkaline phosphatase precursor PMI2501 2740912 - 2739680 - | transposase TERM 3586 2740255 - 2740268 + g 75 -8.1 -4.06502 | TCCGTTGAAGCCTTG CCAGC TTTC GCTGG TTTACTTTAAAACTG PMI2502 2740959 - 2741327 + | transposase TERM 3587 2741338 - 2741379 + T 87 -10.7 -3.6682 | opp_overlap 2741337 2741338, overlap 2741349 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAAATGACA TERM 3588 2741349 - 2741368 + T 95 -10.6 -4.18094 | opp_overlap 2741338 2741337, overlap 2741338 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG TERM 3589 2741441 - 2741413 - T 74 -4 -5.28942 | gap 1, opp_overlap 2741413 TAGCCTAAAGAAAAA GGATGTGTAGT TCACCACC ACT-CACATCC CTTTAAGATAAAAAA PMI2503 2743010 - 2741466 - | esterase TERM 3590 2742329 - 2742313 - G 70 -7.9 -3.63744 | opp_overlap 2742296 2742319 2742320 2742327, overlap 2742311 GCCGTCGTTAAAATA GCACGGC GCT GCTGTGC AGCTGTTGCATTTTC TERM 3591 2742320 - 2742332 + g 70 -9.1 -3.25515 | opp_overlap 2742313 2742311, overlap 2742296 2742319 2742327 TTAAAATAGCACGGC GCTGC TGT GCAGC TGTTGCATTTTCAAT PMI2504 2744334 - 2743195 - | hypothetical protein TERM 3592 2744530 - 2744515 - R 88 -6.2 -5.47399 | opp_overlap 2744514 CTAATTTGAAAAAAA TAGCAT TATT ATGCTA ATCGCTTAATGAACA TERM 3593 2744645 - 2744617 - R 81 -9 -3.93136 | opp_overlap 2744624, overlap 2744624 ATAGCTAGCTATAAA TAAAAAACGCCA ATTAA TGGCGTTTTTAA AAATACTTATTCGAT TERM 3594 2744624 - 2744638 + r 80 -7.1 -4.60889 | opp_overlap 2744624 2744617 GCTATAAATAAAAAA CGCCA ATTAA TGGCG TTTTTAAAAATACTT TERM 3595 2744638 - 2744624 - R 100 -7.1 -5.72622 | opp_overlap 2744624, overlap 2744617 GCTATAAATAAAAAA CGCCA ATTAA TGGCG TTTTTAAAAATACTT nadR 2745896 - 2744652 - | transcriptional regulator radA 2747299 - 2745908 - | DNA repair protein TERM 3596 2746510 - 2746523 + g 77 -5.2 -4.87665 | CACCTAACTCATTCA CCGC ACCAAA GCGG TTTTTATGACTACGC serB 2748310 - 2747333 - | phosphoserine phosphatase smp 2748420 - 2749112 + | hypothetical protein TERM 3597 2749157 - 2749137 - f 71 -6.9 -4.01137 | opp_overlap 2749137 2749134 AAATTAACATAATAA GGTGAGT CATTAGT ACTCACC TTCATTTCTTTATTT PMI2509 2749359 - 2750900 + | hypothetical protein PMI2510 2750872 - 2751738 + | radical SAM superfamily protein PMI2511 2751837 - 2754803 + | autotransporter TERM 3598 2754839 - 2754866 + T 100 -10 -6.09888 | TAGTAGTAATAGTTT GCTTCCTATATT TCAA AATACAGGAAGC TTTTTTTTATTAAAA yntE 2755516 - 2754905 - | nickel/di-oligopepetide ABC transporter, ATP-binding protein yntD 2756387 - 2755584 - | nickel/di-oligopepetide ABC transporter, ATP-binding protein yntC 2757193 - 2756381 - | nickel/di-oligopepetide ABC transporter, permease protein yntB 2758173 - 2757190 - | nickel/di-oligopepetide ABC transporter, permease protein TERM 3599 2758122 - 2758095 - G 100 -8.4 -5.62288 | overlap 2758097 TTAATAAAATAAAAA CACCTGCTGTTG TTAC CAGCAGCAGGCA TAATAATCGCAGGAA TERM 3600 2758120 - 2758097 - G 91 -11 -4.41779 | overlap 2758095 AATAAAATAAAAACA CCTGCTGTTG TTAC CAGCAGCAGG CATAATAATCGCAGG yntA 2759741 - 2758158 - | nickel/di-oligopepetide ABC transporter, substrate-binding protein TERM 3601 2760138 - 2760110 - R 84 -6.2 -5.31059 | gap 1, opp_overlap 2760110 2760113 2760114, overlap 2760114 ATATTAATGAAAAAA TAAA-GGGTGCAA ATTA TTACACCCCTTTA TATTTATTCTGCTAA TERM 3602 2760133 - 2760114 - R 95 -8.6 -5.12785 | opp_overlap 2760114 2760113 2760110, overlap 2760110 TAATGAAAAAATAAA GGGTGCAA ATTA TTACACCC CTTTATATTTATTCT PMI2517 2761134 - 2760142 - | glycosyltransferase TERM 3603 2760951 - 2760969 + g 75 -8.2 -4.05747 | TTAAAATAGTGACAT TGGGAAAG TGT TTTTCCCA TTTATCTAAGATCTG TERM 3604 2761284 - 2761265 - R 73 -8 -3.38786 | TACACTTAACATTAA TCAAAAAG TGCG CTTTTTGA GCCAATTAGGCCTCT TERM 3605 2761411 - 2761469 + r 89 -12 -3.2614 | ATGACTGTTTATCCA TGAGTGATATAAGTTACAAAACTGTC TTTTTTT GGCGGTTGTGACACTTATATCACTCA TTAATATAAAACATC TERM 3606 2761474 - 2761504 + r 77 -9.9 -2.63703 | opp_overlap 2761474 2761481, overlap 2761481 TATATCACTCATTAA TATAAAACATCCG CAGAA CGGATGTTTTTTA CTTATGGATACTTAT TERM 3607 2761504 - 2761474 - R 83 -10.6 -3.1994 | opp_overlap 2761474 2761481, overlap 2761481 TATATCACTCATTAA TATAAAACATCCGC AGA ACGGATGTTTTTTA CTTATGGATACTTAT TERM 3608 2761481 - 2761497 + r 100 -8 -5.32944 | opp_overlap 2761474 2761481, overlap 2761474 CTCATTAATATAAAA CATCCG CAGAA CGGATG TTTTTTACTTATGGA TERM 3609 2761497 - 2761481 - R 89 -8.7 -4.70583 | opp_overlap 2761481 2761474, overlap 2761474 CTCATTAATATAAAA CATCCGC AGA ACGGATG TTTTTTACTTATGGA hycI 2762052 - 2761552 - | hydrogenase maturation protease hyfJ 2762459 - 2762049 - | hydrogenase-4 component J hyfI 2763234 - 2762452 - | hydrogenase-4 component I TERM 3610 2762980 - 2762950 - G 79 -11.1 -3.14963 | overlap 2762942 TTCATAAGCACGTAA TGCCGGTACACGC ATTTG GCGTGTTACGGCA CCAGTAAATAACAAA hyfH 2763785 - 2763231 - | hydrogenase-4 component H TERM 3611 2763691 - 2763734 + g 70 -3.2 -4.91084 | opp_overlap 2763703, overlap 2763693 GGTGAGTACTCAGGT TTTCCTCTAAAACCATCAGG GAGT TCTAATGGTTTAAAAGGATA TTTTGTTGTTGCATC hyfG 2765530 - 2763797 - | hydrogenase-4 component G TERM 3612 2763838 - 2763858 + g 70 -5.5 -4.37198 | opp_overlap 2763852, overlap 2763841 CGATGCTATAACGTT CAATTTCTT TAT AAGAAACTG TTTTCGATTTACGTT TERM 3613 2764803 - 2764780 - G 71 -6.8 -4.02132 | gap 1 GTGTAAAGCCACAAA TCCCA-CAGAC ACG GTCTGATAGGA AAGTCACTTCATTAT TERM 3614 2764926 - 2764914 - G 75 -5.5 -4.67607 | CCGTCAACAAATAAA CGGAA ATG TCCCG GTTCATCAGACGTAA hyfF 2767100 - 2765532 - | hydrogenase-4 component F hyfE 2767755 - 2767105 - | hydrogenase-4 component E hyfD 2769215 - 2767767 - | hydrogenase-4 component D TERM 3615 2768197 - 2768185 - G 71 -4.9 -4.58786 | ACTAAGAAGAACAAA CTTTT AGC AAAAG CGTGGTTAAAGATAT hyfC 2770172 - 2769222 - | hydrogenase-4 component C TERM 3616 2769578 - 2769568 - G 71 -6.8 -4.13767 | opp_overlap 2769567, overlap 2769572 TCCGCGACGTCAAAA GGCA TTT TGCC CATTTCAATAAATGC hyfB 2772200 - 2770185 - | hydrogenase-4 component B TERM 3617 2771009 - 2770999 - G 70 -5.4 -4.431 | CACTCACTCACAAAA CCAT TTA ATGG CGGTAATGCTGAAAT TERM 3618 2772010 - 2772000 - G 71 -6.8 -4.06055 | AGCGGCGAAATCAAA TGGC CCA GCCA TAGCAAAACTGATTG hyfA 2772822 - 2772202 - | hydrogenase-4 component A TERM 3619 2773045 - 2773030 - R 95 -10.4 -4.69664 | GATATGATTGAAAAA GCCTGC AAAA GCAGGC TTACAAAAAAGGGAT rpiB 2773536 - 2773060 - | ribose 5-phosphate isomerase TERM 3620 2773631 - 2773613 - R 77 -3.8 -5.43974 | opp_overlap 2773616, overlap 2773616 AAAACCAAATAAAAA CATCTCAC TCA ATGAGTTG TTACTTATTAAAGTA efp 2774991 - 2774425 - | elongation factor P TERM 3621 2775031 - 2775021 - H 74 -6.8 -4.27316 | TTTTTTAATTTAAAA TGGC ATA GCCA AAAATGGCACACATT TERM 3622 2775190 - 2775208 + G 75 -9.6 -3.34013 | GAGACGACTTTTTCC TTTACGGG TTC CCCGTGAA TTCGTTGCGCGCATG PMI2531 2775035 - 2776063 + | radical SAM superfamily protein TERM 3623 2776182 - 2776153 - T 100 -10.9 -4.86001 | opp_overlap 2776158 2776161 AGTACCTCATAAAAA GCAAATAAGAATG ATCG CGTTCTTATTTGC CCAATATTACGTTAA PMI2532 2776824 - 2776204 - | hypothetical protein PMI2533 2779461 - 2776918 - | outer membrane usher protein TERM 3624 2777720 - 2777734 + g 72 -8.6 -3.53224 | opp_overlap 2777704 2777702 CTTGCATTCATATTT TGCAAG CCA CTTGCA TTTGAGAACACACTC PMI2534 2780320 - 2779505 - | fimbrial chaperone TERM 3625 2780183 - 2780169 - G 70 -5.8 -4.46212 | overlap 2780153 CTTTTTACTACAAAA GAAAAA CCA TTTTTC CCGAAATCTGTTAGA PMI2535 2781041 - 2780325 - | fimbrial chaperone PMI2536 2781606 - 2781049 - | fimbrial protein TERM 3626 2781368 - 2781398 + g 85 -5.7 -5.22104 | gap 1, opp_overlap 2781368, overlap 2781396 GAACTTGTTGAGCAA TTAGTTAACGAGAT AGGG ATCT-GTTGACTAA TTTTATTATTTTTTA TERM 3627 2781396 - 2781406 + g 78 -2.6 -5.42131 | opp_overlap 2781368, overlap 2781368 TAGGGATCTGTTGAC TAAT TTT ATTA TTTTTTATGTCATTA PMI2537 2782184 - 2781609 - | fimbrial protein PMI2538 2782860 - 2782162 - | fimbrial chaperone TERM 3628 2782943 - 2782912 - R 100 -14 -5.13722 | opp_overlap 2782922 GGTAGTAAAACAAAA TTATGGAAAAGGAA TAAA TTCCTTTCCCATAA CATACTAATATTAGT PMI2539 2783517 - 2782954 - | fimbrial subunit PMI2540 2784650 - 2785288 + | hypothetical protein TERM 3629 2785354 - 2785320 - T 91 -7.3 -5.252 | gap 1, opp_overlap 2785320 2785323, overlap 2785323 GATTTTGATAAAAAA CA-ATCTGACCCTGAT AGAC ATTAGGGCCAGATATG TTAGTCACGAGCTAG TERM 3630 2785350 - 2785323 - T 90 -9.2 -4.72201 | opp_overlap 2785320 2785323, overlap 2785320 TTTGATAAAAAACAA TCTGACCCTGAT AGAC ATTAGGGCCAGA TATGTTAGTCACGAG TERM 3631 2785323 - 2785350 + T 74 -9.2 -3.12895 | opp_overlap 2785323 2785320, overlap 2785320 TTTGATAAAAAACAA TCTGACCCTGAT AGAC ATTAGGGCCAGA TATGTTAGTCACGAG PMI2541 2785741 - 2785397 - | lipoprotein TERM 3632 2785933 - 2785943 + H 70 -8.2 -3.06341 | overlap 2785932 TCTATTTATTTTACA CCGC TTT GCGG CTTTTAAAACATATT PMI2542 2786110 - 2786583 + | hypothetical protein TERM 3633 2786634 - 2786651 + T 100 -12.7 -4.8048 | opp_overlap 2786634 TATTATGTAAAAAAA CCCGAGC CTAA GCTCGGG TTTTTGGTGTAAAAC TERM 3634 2786651 - 2786634 - T 100 -12.7 -5.48825 | opp_overlap 2786634 TATTATGTAAAAAAA CCCGAGC CTAA GCTCGGG TTTTTGGTGTAAAAC groL 2788327 - 2786681 - | 60 Kda chaperonin groS 2788673 - 2788380 - | 10 Kda chaperonin fxsA 2789349 - 2788843 - | membrane protein FxsA (suppressor of F exclusion of phage T7) TERM 3635 2789745 - 2789735 - g 70 -3.2 -4.88918 | TCATGTCAAATAAAA CTCG TAT CGAA GAAGACCTGTTAGGT aspA 2789722 - 2791146 + | aspartate ammonia-lyase TERM 3636 2791205 - 2791230 + F 91 -8.3 -4.9445 | gap 1, opp_overlap 2791200 2791205 CTCTTAAAAATACAA GGCACGGACTCT TTA AGAGAC-GTGCC TTTTTACTTGATTGT TERM 3637 2791230 - 2791205 - f 79 -8.3 -4.07746 | gap 1, opp_overlap 2791205, overlap 2791200 CTCTTAAAAATACAA GGCACGGACTCT TTA AGAGAC-GTGCC TTTTTACTTGATTGT dcuA 2791305 - 2792630 + | anaerobic C4-dicarboxylate transporter TERM 3638 2792725 - 2792692 - f 100 -10.3 -5.06505 | opp_overlap 2792696, overlap 2792695 2792696 AACTAGATATAAAAA TAAGTCCCCTCACCC AAAT GGATGAGGGGATTTC ATTTTGACACTACCC TERM 3639 2792722 - 2792695 - f 100 -12 -4.61353 | opp_overlap 2792696, overlap 2792692 2792696 TAGATATAAAAATAA GTCCCCTCACCC AAAT GGATGAGGGGAT TTCATTTTGACACTA TERM 3640 2792696 - 2792721 + F 100 -13.3 -4.20136 | opp_overlap 2792695 2792692 2792696 AGATATAAAAATAAG TCCCCTCACCC AAAT GGATGAGGGGA TTTCATTTTGACACT TERM 3641 2792721 - 2792696 - f 100 -15.5 -3.35185 | opp_overlap 2792696, overlap 2792695 2792692 AGATATAAAAATAAG TCCCCTCACCC AAAT GGATGAGGGGA TTTCATTTTGACACT PMI2548 2792823 - 2793395 + | hypothetical protein TERM 3642 2793411 - 2793427 + T 70 -8.1 -3.06538 | opp_overlap 2793410, overlap 2793418 TTGCATATCAATATT GCAATTA GAG TAATTGC TCATTTCGTTCTCTT TERM 3643 2793518 - 2793502 - T 73 -4.5 -5.04222 | TAAGCAAAGGAAAAA TATCTCT TTA AAAGATA AAAATGGACTATCTT TERM 3644 2793732 - 2793716 - T 82 -10.9 -2.62616 | opp_overlap 2793715 2793714 2793711 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 3645 2793906 - 2793926 + T 83 -10.5 -3.36327 | opp_overlap 2793906 TGATTTATCAAGTAA GGGTGTTTT CCT AGAACACCC TTCTCAATCAAATCC TERM 3646 2793926 - 2793906 - T 73 -8.3 -3.40867 | opp_overlap 2793906 TGATTTATCAAGTAA GGGTGTTTT CCT AGAACACCC TTCTCAATCAAATCC TERM 3647 2793945 - 2793985 + T 87 -4.4 -5.76237 | gap 2, opp_overlap 2793952 2793956, overlap 2793946 2793948 TCAATCAAATCCAGC T-TATACACAAAGTTGA-TA AAA TAGTCAACTTTGTGTAAATA TTTTTTATTTATATC TERM 3648 2793946 - 2793983 + T 91 -9.5 -4.49311 | gap 1, opp_overlap 2793952 2793956, overlap 2793945 2793948 CAATCAAATCCAGCT TATACACAAAGTTGA-TA AAA TAGTCAACTTTGTGTAAA TATTTTTTATTTATA TERM 3649 2793948 - 2793981 + T 87 -12.1 -2.53848 | gap 1, opp_overlap 2793952 2793956, overlap 2793946 2793945 ATCAAATCCAGCTTA TACACAAAGTTGA-TA AAA TAGTCAACTTTGTGTA AATATTTTTTATTTA PMI2549 2795069 - 2793999 - | phage integrase TERM 3650 2794819 - 2794832 + g 75 -8.1 -3.9777 | GTTTTTGTGTTCCAT GTCCG TTCC CGGAC TTTCTGAATATTCAG TERM 3651 2794950 - 2794940 - G 70 -3.2 -4.94222 | opp_overlap 2794942, overlap 2794942 AATAACGCAGAAAAA GACG TAC CATC TTACGGTATGTTTTC PMI2550 2796677 - 2795085 - | helicase TERM 3652 2795719 - 2795737 + g 78 -3.8 -5.26316 | ATTAGCGGTATATCG CAGTGAAT TCC GTTCTCTG TTTTTTCTGAAGTAA TERM 3653 2795928 - 2795910 - G 72 -4.4 -4.74539 | overlap 2795911 2795923 AACAACGGAAGAAAA TGCCGGCA ATG CACCGGCG GGGAACGCAGCCAGA TERM 3654 2796382 - 2796397 + g 72 -4.6 -4.72272 | opp_overlap 2796365 AGCAATCCCCCTTCG CCGGCA TATT TCCCGG TTTTTGATGCCGGCA TERM 3655 2796599 - 2796628 + g 93 -10.1 -4.6821 | gap 1, overlap 2796600 2796601 2796615 TAAATAATGGCCTTT C-CTGCGTGTTTCC CGG GGAAACACGCAATG TTTTCTCTTCCGCTT TERM 3656 2796600 - 2796626 + g 100 -13.8 -3.94773 | overlap 2796599 2796601 2796615 AAATAATGGCCTTTC CTGCGTGTTTCC CGG GGAAACACGCAA TGTTTTCTCTTCCGC TERM 3657 2796601 - 2796625 + g 100 -17.3 -2.96141 | overlap 2796600 2796599 2796615 AATAATGGCCTTTCC TGCGTGTTTCC CGG GGAAACACGCA ATGTTTTCTCTTCCG TERM 3658 2796639 - 2796655 + g 76 -10.9 -2.71712 | opp_overlap 2796653, overlap 2796638 CAATGTTTTCTCTTC CGCTTTC CGG GAAAGCG ATTTACGAAACCACG PMI2551 2797179 - 2796853 - | hypothetical protein TERM 3659 2797292 - 2797275 - R 100 -11.3 -6.32976 | opp_overlap 2797275 AAAAAAATAAAAAAA CCCGGTA TCAC TACCGGG TTTTCAGTCAGTTAA TERM 3660 2797275 - 2797292 + r 100 -11.3 -4.21275 | opp_overlap 2797275 AAAAAAATAAAAAAA CCCGGTA TCAC TACCGGG TTTTCAGTCAGTTAA PMI2552 2798324 - 2797323 - | plasmid-related protein TERM 3661 2797556 - 2797541 - G 77 -6 -4.60143 | overlap 2797543 ACAGAGCACACAAAA CCGCTG CTGA CGGCGG CCCCCACGGAGTATC TERM 3662 2798100 - 2798077 - G 79 -10.4 -3.54543 | gap 1 ACCCAGTGCGTGAAA GCCGTGTTTCC CGG GGAAACA-GGC CCGGTTGCACCGTAT TERM 3663 2798382 - 2798353 - R 100 -15.1 -5.55769 | opp_overlap 2798331, overlap 2798357 TTTCAGAATAAAAAA GAGGGCTTATCCC GTGA GGAACAAGCCCTC ACGGGAAAGATGTCA TERM 3664 2798392 - 2798357 - R 71 -9.1 -2.52342 | gap 1, opp_overlap 2798331, overlap 2798353 AGAATAAAAAAGAGG GCTTATCCCGTGAGGA ACAAG CCCTCACGGGA-AAGA TGTCAGTCGTTAATC PMI2553 2798708 - 2798409 - | hypothetical protein PMI2554 2799692 - 2798718 - | DNA primase TERM 3665 2798792 - 2798757 - G 80 -6.1 -4.76041 | gap 2, overlap 2798758 2798761 CACATTCAGTAAAAA CTCACAGGCCTGGCGGG CCTG CCCGGC-GGCCCG-GAA CAACGCTTTTTTGTC TERM 3666 2798789 - 2798761 - G 73 -10.2 -2.86601 | gap 1, overlap 2798758 2798757 TTCAGTAAAAACTCA CAGGCCTGGCGGG CCTG CCCGGC-GGCCCG GAACAACGCTTTTTT TERM 3667 2799171 - 2799190 + g 80 -11.4 -2.85668 | overlap 2799173 CACCCGGTGCGTGGC CGGCAGGG TTAT CCCTGCTG TCTCCTCTCCGGGTA TERM 3668 2799173 - 2799188 + g 75 -10.4 -2.97747 | overlap 2799171 CCCGGTGCGTGGCCG GCAGGG TTAT CCCTGC TGTCTCCTCTCCGGG TERM 3669 2799543 - 2799593 + g 71 -5.2 -4.56597 | overlap 2799527 2799561 GTTCACCGGAAAACC GGTGCCTGTCCCTTCCGACGGCCG CCA TGGTCGTTTCCACGGACGGGTGCC TTTTTCCAGCGCGGC TERM 3670 2799744 - 2799714 - R 93 -6.9 -5.45652 | gap 1, overlap 2799716 2799741 ACCCTCAATAAAAAA GGTGTATCCCGTCC TGAC GGT-GAGATACACC ATCAGGTGAAAAAAC TERM 3671 2799887 - 2799869 - R 70 -8.2 -3.14801 | overlap 2799868 GGCCACAAAAAACAG TGACTCTG CGT CAAAGTCA AACGTCTCCGTTATC PMI2555 2800492 - 2799845 - | hypothetical protein PMI2556 2801004 - 2800492 - | hypothetical protein TERM 3672 2800718 - 2800697 - G 77 -8.7 -3.85698 | opp_overlap 2800697 GCTGTCTTGCAGAAA TCCCAGTAG TCCT CTACGGGGA TTTCGCGCTGAACAA TERM 3673 2800697 - 2800718 + g 72 -8.7 -3.57144 | opp_overlap 2800697 GCTGTCTTGCAGAAA TCCCAGTAG TCCT CTACGGGGA TTTCGCGCTGAACAA TERM 3674 2800797 - 2800824 + g 80 -6.4 -4.72272 | gap 1 GCGCCTCACCGTCGT CGG-TGAATAATG AGC CATCATTCAGCCG TTTTTCCTCCAGGCC TERM 3675 2801069 - 2801034 - R 100 -11.2 -5.52384 | overlap 2801035 2801063 2801064 TTCTGATTAAAAAAA TGGCGGATTCATCTCC TGAC GGAAATCAATCCGCCG GGCGGGGTCATAACA TERM 3676 2801068 - 2801035 - R 100 -14.7 -3.90707 | overlap 2801034 2801063 2801064 TCTGATTAAAAAAAT GGCGGATTCATCTCC TGAC GGAAATCAATCCGCC GGGCGGGGTCATAAC PMI2557 2801471 - 2801115 - | hypothetical protein TERM 3677 2801531 - 2801494 - R 100 -12.2 -5.40072 | gap 2, opp_overlap 2801506, overlap 2801504 2801505 TCTCCGGTAAAAAAA GACGGAGAAACGTCCACC TGAC GG-GGA-GTTTCCCCGTC GGGTAGGTAAGTAAA TERM 3678 2801540 - 2801504 - R 85 -9.3 -4.02468 | opp_overlap 2801506, overlap 2801494 2801505 AAAAAGACGGAGAAA CGTCCACCTGACGGGGA GTT TCCCCGTCGGGTAGGTA AGTAAAAAAAGAATG TERM 3679 2801539 - 2801505 - R 83 -10.6 -2.99854 | opp_overlap 2801506, overlap 2801494 2801504 AAAAGACGGAGAAAC GTCCACCTGACGGGGA GTT TCCCCGTCGGGTAGGT AAGTAAAAAAAGAAT PMI2558 2801990 - 2801568 - | hypothetical protein TERM 3680 2801938 - 2801915 - G 70 -9.6 -2.6574 | CAACCAGCCACATCA GCCATTCCCA ACTC CGGGAATAGC GACAGACGTGATCGG PMI2559 2802534 - 2802157 - | hypothetical protein TERM 3681 2802431 - 2802419 - G 70 -5.5 -4.32678 | TGCGGAAATAAATAA CTGGC AAT ACCAG ACATTACGTGGGCAA TERM 3682 2802523 - 2802494 - G 82 -10.7 -3.49475 | opp_overlap 2802501, overlap 2802477 2802499 2802503 GCTATCCTCAGATAA GGGAATACAGCCC TCAC GGGATGTTTTCCC GTATGGGTCATAAAA PMI2560 2802831 - 2802556 - | hypothetical protein PMI2561 2803075 - 2802881 - | hypothetical protein TERM 3683 2802971 - 2802938 - G 79 -5.9 -5.00616 | opp_overlap 2802923 2802945 2802946 2802949, overlap 2802923 2802946 2802947 TTTCTCCTGAAAAAA CGGAGAAATTCCCTG ATGA CGGGTGATTTCCCCG TCAGCGGGCAGGTTA PMI2562 2803270 - 2803142 - | hypothetical protein PMI2563 2803878 - 2803267 - | hypothetical protein TERM 3684 2803725 - 2803739 + g 84 -2.1 -5.77571 | opp_overlap 2803718 2803717 TTATTAACCCCGAAC CGGAA ACATA TTCTG TTTTTATTTTTTCAT PMI2564 2804794 - 2803886 - | hypothetical protein TERM 3685 2804476 - 2804495 + g 91 -13.6 -2.85297 | opp_overlap 2804471 2804470, overlap 2804473 2804471 CACCTGAAAGCCCCA GCGCCTCA TTAC TGAGGCGC TCATGTTTAGGGTCA TERM 3686 2804946 - 2804932 - R 71 -8.6 -2.86492 | opp_overlap 2804932, overlap 2804931 2804934 TGAGAGGTATCAAAT CAGTTC TCT GAACTG TTTGCGGTCATCAGA TERM 3687 2804932 - 2804946 + r 77 -8.6 -3.62096 | opp_overlap 2804931 2804932 2804934 TGAGAGGTATCAAAT CAGTTC TCT GAACTG TTTGCGGTCATCAGA PMI2565 2805110 - 2804931 - | hypothetical protein PMI2566 2805195 - 2805416 + | hypothetical protein TERM 3688 2805741 - 2805721 - T 93 -6.9 -5.38054 | opp_overlap 2805721 CCCGATAAAGAAAAA GGAGAATAT TTT ACATCCTCC TTTTTCTCTTTATTA PMI2567 2806076 - 2805837 - | hypothetical protein PMI2568 2806375 - 2806076 - | hypothetical protein PMI2569 2806718 - 2807125 + | hypothetical protein TERM 3689 2807155 - 2807125 - T 100 -13.4 -2.77999 | opp_overlap 2807143, overlap 2807120 2807122 2807143 TATTGACGAAGATTA GCCAGCCACAAAAC TAA ATTTTGCAGCTGGC TTCAAAATATTATTA PMI2570 2808679 - 2807168 - | hypothetical protein PMI2571 2809017 - 2808679 - | hypothetical protein TERM 3690 2808926 - 2808911 - G 76 -9 -3.65046 | overlap 2808915 GCCTCACCGTAATAA CTCAGC CCCA GCTGAG CCACCGCCAGCAACA TERM 3691 2808991 - 2809001 + g 88 -8.2 -5.01811 | opp_overlap 2808991 CAGCACCGGCCATAA CCGG CGC CCGG TTTTTCCTTTCGTCA PMI2572 2810457 - 2809018 - | hypothetical protein TERM 3692 2809407 - 2809421 + g 70 -5.6 -4.35524 | overlap 2809400 TCACCCCCCGGGAGA CCGTCA GGC TGCCGG TTTTCAGTTTCGCCA TERM 3693 2810089 - 2810107 + g 77 -10.2 -3.36327 | overlap 2810090 CATCGCCGGCAGACT GGCCACCG CCC CGGTGGCA TTCTGGATCACCTCA TERM 3694 2810090 - 2810106 + g 91 -13.7 -2.61582 | overlap 2810089 ATCGCCGGCAGACTG GCCACCG CCC CGGTGGC ATTCTGGATCACCTC TERM 3695 2810386 - 2810366 - G 77 -5.3 -4.84359 | overlap 2810370 GCACCGGCAGAAAAA TCCAGCCCG GCC CGGACAGAA AATGCCGGTACACTG PMI2573 2811449 - 2810475 - | hypothetical protein TERM 3696 2810819 - 2810809 - G 80 -8.2 -4.36914 | TGCTGGTTGACAAAA CCGC TGC GCGG ATAGAGATTTCCCCA TERM 3697 2811179 - 2811189 + g 75 -8.2 -4.07568 | TGACCAGTGACATTT CCCG CCA CGGG TTTTCACCCGGGGCA PMI2574 2811886 - 2811446 - | lipoprotein TERM 3698 2811625 - 2811645 + g 71 -7.5 -3.85698 | overlap 2811626 GCCGTAATGCCGTTT CTCTGGCCT GCC AGGCCGGAC TTTGTAACAGGGCGG TERM 3699 2811626 - 2811644 + g 77 -11 -2.91276 | overlap 2811625 CCGTAATGCCGTTTC TCTGGCCT GCC AGGCCGGA CTTTGTAACAGGGCG TERM 3700 2811964 - 2811925 - R 100 -12.2 -4.84311 | gap 1, opp_overlap 2811936, overlap 2811936 GGTGAGAGAAGAAAA GCGCATCAAAACCCGCCGG TGA CCGGCGGGTTTTCAC-CGG TTACCAGCCCACCGC TERM 3701 2811954 - 2811936 - R 100 -17.4 -4.30034 | opp_overlap 2811936, overlap 2811925 AAAAGCGCATCAAAA CCCGCCGG TGA CCGGCGGG TTTTCACCGGTTACC TERM 3702 2811936 - 2811954 + r 100 -17.4 -4.11484 | opp_overlap 2811936 2811925 AAAAGCGCATCAAAA CCCGCCGG TGA CCGGCGGG TTTTCACCGGTTACC TERM 3703 2812011 - 2811984 - R 74 -9.8 -2.76162 | opp_overlap 2811985, overlap 2811983 CAGCCCACCGCAAAC CCGGCGCCGATA CTGG TATCGCCGCCGT TATTCCATGACGCAT TERM 3704 2811985 - 2812010 + r 100 -13.3 -3.67597 | opp_overlap 2811984 2811983 AGCCCACCGCAAACC CGGCGCCGATA CTGG TATCGCCGCCG TTATTCCATGACGCA PMI2575 2814190 - 2811965 - | adhesin TERM 3705 2812595 - 2812607 + g 82 -7.7 -4.56597 | CAGGCTGCCGTCCCC CAGTG CCA CACTG TTTTTCGCCAGCGCC TERM 3706 2813584 - 2813598 + g 71 -6.4 -4.29176 | opp_overlap 2813584 TGATGGTTTCATTAA CCAGAG CAC TTCTGG TTTTCGCTTCAATAT TERM 3707 2813972 - 2813993 + g 70 -8.7 -3.40382 | overlap 2813973 CTGCTCATGCGCCTG CGCCCTGTT CTGC AACAGGGCA TTCTGGGCTTTCATC TERM 3708 2813973 - 2813992 + g 81 -12.2 -2.63747 | overlap 2813972 TGCTCATGCGCCTGC GCCCTGTT CTGC AACAGGGC ATTCTGGGCTTTCAT TERM 3709 2814098 - 2814116 + g 87 -8.8 -4.64766 | CCCCGTGGCCACGGC CGTGTCCC CCA GTGACACG TTTTTGGCCTGTAAA PMI2576 2817152 - 2814285 - | hypothetical protein TERM 3710 2815118 - 2815093 - G 82 -11.1 -3.53091 | gap 1, overlap 2815094 AGCGCCTCCTGCAAA TCCG-CCGGCAG CAT CTGCCGGTCGGC GGCATAAGACGCCCG TERM 3711 2815117 - 2815094 - G 95 -14.6 -2.71712 | gap 1, overlap 2815093 GCGCCTCCTGCAAAT CCG-CCGGCAG CAT CTGCCGGTCGG CGGCATAAGACGCCC TERM 3712 2815506 - 2815484 - G 79 -11.2 -2.64561 | opp_overlap 2815496, overlap 2815483 2815481 2815479 CCGCAATAAACAGAC GCGGACGGCG GAC CGCCATCAGC TGCGATAACTGTGCG TERM 3713 2815838 - 2815863 + g 74 -4 -5.13741 | gap 1, overlap 2815841 CCAGACCGGCATTCA GCAGCGTGG CCGTCAGAT CCACGC-GC TTTTTGTTCAGTTCC TERM 3714 2816150 - 2816165 + g 89 -11.8 -3.61889 | GCTCCCCGGTCAGGT GCCCCG GCCC CGGGGC TTTACGCAGTTTTTC TERM 3715 2817037 - 2817053 + g 71 -9.4 -2.80443 | opp_overlap 2817037, overlap 2817025 GGCTGACGGCCTAAA CCGGCA TTCTC TGCCGG TGTACTGCGGTGTAC TERM 3716 2817053 - 2817037 - G 77 -9.4 -3.55444 | opp_overlap 2817025 2817037 GGCTGACGGCCTAAA CCGGCA TTCTC TGCCGG TGTACTGCGGTGTAC PMI2577 2817589 - 2817152 - | lipoprotein PMI2578 2818071 - 2817586 - | hypothetical protein TERM 3717 2817692 - 2817680 - G 74 -4.8 -4.72846 | TCAGATAGTGAAAAA GGCA CACAT TGCC AGCCGGCTTTATCCG PMI2579 2819564 - 2818068 - | hypothetical protein TERM 3718 2819442 - 2819485 + g 73 -6.7 -4.26076 | gap 3 GATTGACTGAGACAG GTTGTCCTGTCCG-C-TGCCGG TGA CCGGCGTGTCGGGCTGG-CAGC TTTTGATACCAATCA PMI2580 2820457 - 2819561 - | hypothetical protein TERM 3719 2820434 - 2820445 + g 73 -5.8 -4.51097 | CCCCAGAGCACAGGC CGTC AGAT GACG TTTTATGCTCATTGA PMI2581 2821098 - 2820454 - | hypothetical protein PMI2582 2821507 - 2821091 - | hypothetical protein TERM 3720 2821572 - 2821528 - R 75 -5 -5.00616 | gap 1, overlap 2821533 CCTCCGCTTAAAAAA TAATAGTGGCGGATTTTCCGG CCAG CCAGACGA-CCGCCACAATCA GGACGACACCGACTA TERM 3721 2821567 - 2821533 - R 72 -7.1 -3.91465 | gap 1, overlap 2821528 GCTTAAAAAATAATA GTGGCGGATTTTCCGG CCAG CCAGACGA-CCGCCAC AATCAGGACGACACC PMI2583 2821933 - 2821520 - | hypothetical protein TERM 3722 2821670 - 2821643 - G 78 -10.6 -3.06796 | GCGCACTTCATTGAA CGTGGTGACC GCGGCAAT GGCCACCACG ATAAAAGCCGTCGCA PMI2584 2822169 - 2821930 - | hypothetical protein PMI2585 2822492 - 2822166 - | hypothetical protein PMI2586 2822639 - 2823247 + | hypothetical protein TERM 3723 2823268 - 2823280 + T 85 -10.5 -3.54475 | opp_overlap 2823261 2823258 TCACACCACTGACGC GCGGC CTA GCCGC TTGTCTGCTGACAGA TERM 3724 2823377 - 2823356 - T 79 -10.1 -2.91322 | overlap 2823353 ATATTTTTTAAATGA CGCGGTAGC CACT GCCACCGCA AGCCCGAACAACAGA PMI2587 2824084 - 2823335 - | hypothetical protein PMI2588 2826218 - 2824071 - | plasmid transfer protein TERM 3725 2825439 - 2825428 - G 73 -7.2 -4.09243 | opp_overlap 2825428, overlap 2825429 GATACTCGGCCAAAA CGCC CGAT GGCG TTATAACGGGCACTG TERM 3726 2826272 - 2826330 + r 100 -12.7 -3.60792 | opp_overlap 2826269 2826267 2826303 TGTTTAAAAATTCAC CGGTGTTTCCAGTGGAAACAGTG TTCAAAAATCATC CAGCGTTTCCACTGGAAACACTG TTTGAAAATTCACCG TERM 3727 2826335 - 2826303 - R 93 -9.9 -4.59511 | opp_overlap 2826272 AACAGTGTTCAAAAA TCATCCAGCGTTTCC ACT GGAAACACTGTTTGA AAATTCACCGACACG PMI2589 2826574 - 2826377 - | subunit of ATP synthase PMI2590 2827128 - 2826574 - | hypothetical protein TERM 3728 2826919 - 2826953 + g 72 -10.1 -2.60194 | gap 2, overlap 2826918 2826931 TGACGGGGCCATCAC GGACGGCAGAG--GGCG GGA CGCCGGCTTTGCTGTCC ATTCATTCGGGGCAT PMI2591 2827756 - 2827118 - | lytic transglycosylase PMI2592 2828506 - 2827769 - | hypothetical protein PMI2593 2829257 - 2828517 - | hypothetical protein PMI2594 2829916 - 2829254 - | conjugal transfer protein TERM 3729 2830048 - 2830030 - R 77 -8.8 -3.63744 | opp_overlap 2830030, overlap 2830015 2830028 GGCGGGTGTAAAATA CCGCCTCT AAA AGAGGTGG TTTTAAATTGGGCCC TERM 3730 2830030 - 2830048 + r 100 -11 -4.27316 | opp_overlap 2830015 2830030 2830028 GGCGGGTGTAAAATA CCGCCTCT AAA AGAGGTGG TTTTAAATTGGGCCC TERM 3731 2830056 - 2830080 + r 70 -6.3 -4.24413 | opp_overlap 2830056 2830057, overlap 2830058 2830060 AGAGGTGGTTTTAAA TTGGGCCCCCT ATA AGGGGGCTATA TTCTTTATTAATCCC TERM 3732 2830058 - 2830078 + r 80 -8.9 -3.71448 | opp_overlap 2830057 2830056, overlap 2830056 2830060 AGGTGGTTTTAAATT GGGCCCCCT ATA AGGGGGCTA TATTCTTTATTAATC TERM 3733 2830060 - 2830076 + r 100 -13.7 -3.41979 | opp_overlap 2830057 2830056, overlap 2830058 2830056 GTGGTTTTAAATTGG GCCCCCT ATA AGGGGGC TATATTCTTTATTAA TERM 3734 2830607 - 2830628 + r 70 -7.3 -3.57263 | opp_overlap 2830610, overlap 2830608 GCCTCACAGGGTCAA TCATCACCT GCTT AGGTGGTGG TTTAAGGCTGACAAT PMI2596 2832671 - 2830683 - | siderophore TonB-dependent receptor TERM 3735 2831922 - 2831908 - G 74 -5 -4.6856 | GAAAGAGGTGAAAAA GGAACA AAA TATTCC TCATGAGAATGGTAA TERM 3736 2832587 - 2832607 + g 70 -8.3 -3.37959 | TTGTATTATCATGCT GTTCTGTGG CAG CTACAGAGC TTACTGTTACCATTG PMI2597 2832928 - 2834157 + | MFS-family transporter PMI2598 2834189 - 2834926 + | hypothetical protein TERM 3737 2836256 - 2836233 - g 71 -5.2 -4.57837 | opp_overlap 2836231 2836234 2836234 2836236, overlap 2836234 AGACCTTCGTAAAAA TGGCACCCAT CCTT ATGGGTGTCC TGTTGTCTTTACTAG TERM 3738 2836255 - 2836234 - g 70 -8.7 -3.3422 | opp_overlap 2836231 2836234 2836234 2836236, overlap 2836233 GACCTTCGTAAAAAT GGCACCCAT CCTT ATGGGTGTC CTGTTGTCTTTACTA TERM 3739 2836234 - 2836255 + G 76 -10.9 -2.70128 | opp_overlap 2836234 2836233, overlap 2836231 2836234 2836236 GACCTTCGTAAAAAT GGCACCCAT CCTT ATGGGTGTC CTGTTGTCTTTACTA TERM 3740 2836234 - 2836256 + G 72 -8.5 -3.51419 | gap 1, opp_overlap 2836234 2836233, overlap 2836234 2836231 2836236 GACCTTCGTAAAAAT GG-CACCCAT CCTT ATGGGTGTCC TGTTGTCTTTACTAG TERM 3741 2836236 - 2836253 + G 71 -9.9 -2.88134 | opp_overlap 2836234 2836233, overlap 2836234 2836234 2836231 CCTTCGTAAAAATGG CACCCAT CCTT ATGGGTG TCCTGTTGTCTTTAC TERM 3742 2836326 - 2836302 - g 74 -4.4 -4.88067 | opp_overlap 2836302 ACTTATTGATAAAAA TATAGAATCT GTATT AGGTTCTATA GGATGGGGAATATCA TERM 3743 2838695 - 2838724 + G 84 -7.9 -4.82901 | opp_overlap 2838695 AAGAGATACAAAAAT TCGTTTCACTCTG TGCT CCGAGTGGAATGA TTTTTATACAAGAAG TERM 3744 2840383 - 2840353 - g 75 -10.5 -3.1996 | opp_overlap 2840353 GAAATGGCAATTCAA CGACAGATGTCTC ATATA GAGATACCTGTCG TTTTTACCTGTGCAT TERM 3745 2840353 - 2840383 + G 93 -10.5 -4.71061 | opp_overlap 2840353 GAAATGGCAATTCAA CGACAGATGTCTC ATATA GAGATACCTGTCG TTTTTACCTGTGCAT TERM 3746 2840797 - 2840767 - g 74 -4.1 -5.1764 | opp_overlap 2840776, overlap 2840768 2840770 2840788 CAGACAATACAAAAA CTACAACAACTTG TTAAG CAAGTTATTGGAA TAACGTTAGCACCTG TERM 3747 2840894 - 2840883 - g 93 -5.8 -5.67967 | opp_overlap 2840883 AGCACTACAAAAAAA TGGC TATA GCCA TATTACAATTACTGA PMI2599 2834947 - 2841051 + | non-ribosomal peptide synthase (siderophore synthase) TERM 3748 2842688 - 2842668 - g 93 -11.3 -4.2602 | opp_overlap 2842668 2842673, overlap 2842673 TACATCAACAAATAA GAAAATAGC GTG GCTATTTTC TGGTATGGGATCACA TERM 3749 2842668 - 2842688 + G 79 -11.3 -2.63596 | opp_overlap 2842668 2842673, overlap 2842673 TACATCAACAAATAA GAAAATAGC GTG GCTATTTTC TGGTATGGGATCACA TERM 3750 2842683 - 2842673 - g 81 -5.4 -5.08731 | opp_overlap 2842668 2842673, overlap 2842668 CAACAAATAAGAAAA TAGC GTG GCTA TTTTCTGGTATGGGA TERM 3751 2842673 - 2842683 + G 73 -5.4 -4.50976 | opp_overlap 2842673 2842668, overlap 2842668 CAACAAATAAGAAAA TAGC GTG GCTA TTTTCTGGTATGGGA TERM 3752 2843339 - 2843321 - g 82 -6 -4.93365 | CCTCACAAGGAAAAA TAGCCTTA GTC TCAGGCTA TACAGGGCAATTAAT TERM 3753 2844887 - 2844873 - g 71 -5 -4.52589 | overlap 2844874 TGTTTCGACAGAAAA CGATCA CTT TGATCA AGAGTTACCTAGTGA TERM 3754 2846664 - 2846674 + G 75 -5.4 -4.67011 | overlap 2846665 CTACGGAGGCGTTGC TTGC CAT GCAA TTTTTGAATGGGATT TERM 3755 2848057 - 2848042 - g 71 -7.6 -3.89334 | opp_overlap 2848041 AAAGACGATACGAAA GTAGAG CCTC CTCTAC AATTACTGTTTGAAG nrpS 2841064 - 2850279 + | non-ribosomal peptide synthase (siderophore synthase) nrpU 2850279 - 2851367 + | siderophore biosynthetic protein nrpT 2851367 - 2852140 + | siderophore biosynthetic protein (thioesterase) TERM 3756 2852414 - 2852427 + G 74 -3.8 -5.0916 | ATAAGTCATATTGCC GCAC ATCGGG GTGC TTTTTATATTCAGCA nrpA 2852159 - 2853925 + | siderophore ABC transporter, ATP-binding/permease protein TERM 3757 2854138 - 2854164 + G 72 -3.1 -5.16071 | overlap 2854158 TTGTTCTGCGTATTG TCATTGGTA CTTATAGTA TGCCAATGA TTTTTATTGGTGCTT TERM 3758 2854674 - 2854684 + G 76 -3.2 -5.28831 | CTTTATGGTTTTATT CTTG AAT CAGG TTTTATTTTATTAAT TERM 3759 2855501 - 2855483 - g 75 -8.2 -3.99481 | overlap 2855478 GTTATCAAAAGATAA GACAATCA TTA TGATTGCC CATCGATTAAATAGC nrpB 2853918 - 2855645 + | siderophore ABC transporter, ATP-binding/permease protein TERM 3760 2855786 - 2855765 - g 80 -10.3 -3.64371 | opp_overlap 2855768, overlap 2855768 AATGCACATCTTAAA TAACGATGA AATT TCATCGTTA TTCGACTACCCTTTT TERM 3761 2855783 - 2855768 - g 71 -7.6 -3.95378 | opp_overlap 2855768, overlap 2855765 GCACATCTTAAATAA CGATGA AATT TCATCG TTATTCGACTACCCT nrpG 2855658 - 2856407 + | 4'-phosphopantetheinyl transferase TERM 3762 2857552 - 2857523 - f 80 -9.5 -3.44487 | overlap 2857521 CATTATACTGAAATA CGTATTAAGAACT CAAA AACTCTTAATACG GGCTTACGTGCTTTC PMI2608 2857629 - 2857817 + | prophage regulatory protein TERM 3763 2858210 - 2858195 - g 78 -2.6 -5.46657 | overlap 2858196 GAGCTGAAGAAAAAA CTTCAA CGTA TTGAAA TGGAAAATGAAATAT insN 2857976 - 2858278 + | transposase for insertion sequence element IS911 TERM 3764 2858531 - 2858552 + F 72 -8.7 -3.03771 | TTATGAGGAAGCTGG GGCTGGTGA GTTG TCAGCAGCC TGTTCACCGATATAG TERM 3765 2859587 - 2859574 - g 77 -8.1 -4.30978 | opp_overlap 2859573 CGTAATGCAGTAAAA GCCTG TACG CAGGC GATTAATCAGCTTCG PMI2612 2859139 - 2860203 + | transposase TERM 3766 2862288 - 2862268 - T 100 -9.7 -5.9873 | opp_overlap 2862270 TGATTATAAAAAAAA GAGGCACCC ATA GAGTACCTC ACTTACTTTATATCT PMI2618 2864690 - 2862321 - | TonB-dependent receptor TERM 3767 2862449 - 2862465 + g 76 -7.3 -4.14633 | opp_overlap 2862449, overlap 2862455 AATCAACCGAAACAT CTACCTT ATC AAGGTGG TATTTTTTGCCAATC TERM 3768 2862455 - 2862467 + g 70 -2.7 -5.03314 | opp_overlap 2862449, overlap 2862449 CCGAAACATCTACCT TATCA AGG TGGTA TTTTTTGCCAATCCC TERM 3769 2864536 - 2864546 + g 85 -5.4 -5.20735 | opp_overlap 2864536, overlap 2864507 TTGAGTAATAAAGAG GAGA ATG TCTC TTTGTTTTTTATTGA TERM 3770 2864582 - 2864593 + g 76 -4.4 -5.05606 | opp_overlap 2864582 CTTTAACAGTAATAA CATC GTTT GATG TTTCTTTTTCTTGGC PMI2619 2866794 - 2864701 - | TonB-dependent receptor TERM 3771 2868204 - 2868178 - R 71 -8 -3.30441 | overlap 2868182 2868183 TAGTATCTTTCAGAA CTAACCTTCCCG CAC CGGAAAGATAAG GAAACTCAGTATGAG TERM 3772 2868888 - 2868911 + r 72 -2.6 -5.46706 | overlap 2868882 ATCGGGAGTTGAAGA TAATTTGAGT TTAC ATTTAAATTA TTTTTATTTTCAAAT TERM 3773 2869266 - 2869254 - R 72 -4.9 -4.77036 | GGCCATCATGAAAAA GAAAA GTT TTTTC ATGGAAACTCCGAAC TERM 3774 2870454 - 2870440 - R 76 -3.6 -5.38326 | overlap 2870429 TGAATTAAAGAAAAA TCATTC TTT AAATGA TATACCTTGATCTGC TERM 3775 2870930 - 2870910 - R 74 -6.3 -4.43283 | opp_overlap 2870914, overlap 2870914 TGACATAAATATAAA TAAATGAAA TAT TTTCACTTA ATATTTCAGCAAGAT TERM 3776 2870926 - 2870914 - R 72 -4.9 -4.74787 | opp_overlap 2870914, overlap 2870910 ATAAATATAAATAAA TGAAA TAT TTTCA CTTAATATTTCAGCA TERM 3777 2872035 - 2872011 - R 91 -5.6 -5.79635 | opp_overlap 2872027, overlap 2872013 2872027 AAAAAAAAAAGAAAA CGGCGGGCAT AAAAA ATGCCGGCAG TCATGCCGGCATTTG TERM 3778 2872046 - 2872027 - R 100 -13.6 -5.24129 | opp_overlap 2872027, overlap 2872013 2872011 GGCGGGCATAAAAAA TGCCGGCA GTCA TGCCGGCA TTTGAGAGTAAAAAC TERM 3779 2872027 - 2872046 + r 100 -13.6 -3.57144 | opp_overlap 2872013 2872011 2872027 GGCGGGCATAAAAAA TGCCGGCA GTCA TGCCGGCA TTTGAGAGTAAAAAC PMI2627 2872993 - 2872070 - | transposase TERM 3780 2872934 - 2872917 - G 76 -3.3 -5.28176 | opp_overlap 2872902 2872917, overlap 2872906 2872902 TGCACCGAGAAAAAA TCCCGGG CATT CTCAGGA TGCGTTAAAAACTGC PMI2628 2873481 - 2873014 - | hypothetical protein TERM 3781 2873389 - 2873374 - G 77 -6 -4.57073 | opp_overlap 2873362 2873386, overlap 2873376 CACTGCGGTTAAAAA CTGCCC TTTA GGGCCG TTAACCTGACGGATA PMI2629 2873671 - 2873465 - | hypothetical protein TERM 3782 2873550 - 2873516 - G 90 -5.1 -5.63857 | gap 1 AAAAAGGTAAAAAAA TGAGAAACATCGTCTC GGCA GGAACG-TGTTTCCCA CCGGGGTCAGTAACA TERM 3783 2873831 - 2873851 + r 100 -6.9 -6.02919 | opp_overlap 2873831 2873847 2873848 TAAGCAACGGTATAA GCAGAATAA GGA TTAATCTGC TTTTTTTATTTGTCA TERM 3784 2874071 - 2874057 - R 84 -5.6 -5.44119 | opp_overlap 2874062, overlap 2874060 2874061 CCCACCGGAAAAAAA CAGCGC CCG GCCCTG CCCGGACTGGGTGAT TERM 3785 2874155 - 2874135 - R 100 -7.6 -5.63517 | TTGTCAAATAAAAAA GGCGTTAC GGTTA ATAACGCC TGACAGTGCCGCCCA TERM 3786 2874264 - 2874246 - R 78 -8.9 -3.53811 | opp_overlap 2874246 TTGATGCGCCTTAAA GTCTGTC CTGCT GACAGAC AGACTTTCTCATTGT TERM 3787 2874246 - 2874268 + r 74 -7.1 -4.1021 | gap 1, opp_overlap 2874246 TTGATGCGCCTTAAA GTCTGTCCTG CTGA CAG-ACAGAC TTTCTCATTGTCGCC PMI2630 2876419 - 2874365 - | topoisomerase TERM 3788 2875770 - 2875757 - G 70 -9.5 -2.71731 | CTGATGCTGCAACGA GGCGG TCAC CCGCC AGAAGGGTTTGGAAA PMI2631 2876965 - 2876429 - | lipoprotein TERM 3789 2877004 - 2877015 + r 74 -3 -5.40072 | opp_overlap 2877004 TTAACCCAATATAAA TAAC ATTC GTTA TTTTTTTAAAGACGG PMI2632 2877717 - 2877013 - | hypothetical protein PMI2633 2878000 - 2878518 + | hypothetical protein TERM 3790 2878747 - 2878689 - g 74 -9 -3.61536 | opp_overlap 2878684 2878683 2878697 2878733, overlap 2878692 AACCCAATTTTTAAA CACTGTTTCCAGTGGAAACACCGGTTAA GTT TTGAGCACTGTTTCCAGTGGAAACACCG GTTAAGTTTTGAGCA PMI2634 2878555 - 2878716 + | hypothetical protein TERM 3791 2878744 - 2878692 - T 86 -11.5 -2.62667 | opp_overlap 2878684 2878683 2878697 2878733, overlap 2878689 CCAATTTTTAAACAC TGTTTCCAGTGGAAACACCGGTTAA GTT TTGAGCACTGTTTCCAGTGGAAACA CCGGTTAAGTTTTGA PMI2635 2880099 - 2878804 - | hypothetical protein TERM 3792 2879382 - 2879410 + g 100 -4.5 -6.15717 | opp_overlap 2879387 2879388 CCCTGAGTTCGATTT TCAAATCCGGTGT TTT ACACTGGGCTCGA TTTTTTTTATGTTTA TERM 3793 2880035 - 2880053 + g 75 -3 -5.31275 | TGGCTGTGTTGCCGG TGATGCAG TTG CTGCCGCA TTTTTTCTAATGAAA PMI2636 2880510 - 2880226 - | hypothetical protein PMI2637 2881090 - 2880500 - | hypothetical protein TERM 3794 2880646 - 2880634 - GR 73 -9.1 -2.80245 | overlap 2880619 2880633 TGATCTGAAGACAAT CCGGA TCA TCCGG CTCCGGCATGCCCTC PMI2638 2881517 - 2881005 - | hypothetical protein PMI2639 2883264 - 2881615 - | hypothetical protein TERM 3795 2882161 - 2882190 + g 84 -2 -5.79595 | opp_overlap 2882163, overlap 2882162 2882163 TGCCCCGCCGTATAA ATCCGTCTGGAT CTCCAC AACCGGACGGGA TTTTTTCTTTTCAAC PMI2640 2884631 - 2883279 - | DNA helicase TERM 3796 2884022 - 2884036 + g 70 -2.8 -5.14965 | ACACCAAATCGCCTG CCTG CAAACCA CAGG TTTTTTCATCCAGCT PMI2641 2885355 - 2884624 - | hypothetical protein TERM 3797 2884910 - 2884922 + g 90 -10.5 -4.3487 | opp_overlap 2884902 2884905 2884904 ACAACAACACCGATA CGGGC GAA GCCCG TTTTGACTTGTATGT PMI2642 2886224 - 2885352 - | chromosome partitioning related protein TERM 3798 2886136 - 2886120 - G 79 -10.9 -3.14211 | ATCGCCGTCGATCAA CAGGGTT TTT AACCCTG CATCAGCACAAAAAC TERM 3799 2886166 - 2886151 - G 74 -4.6 -4.93296 | opp_overlap 2886151 2886145 GCATCAGCACAAAAA CCCGCA ATAT TGCTGG CTTTGGTTGACTTTC TERM 3800 2886275 - 2886265 - R 79 -2.6 -5.87688 | AGAAGTCAAAAAAAA TAAT TAC ATTA GTGAATTACATCAAG TERM 3801 2886318 - 2886302 - R 82 -10.9 -2.71681 | opp_overlap 2886301 CAAGCTTTTTAACTA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 3802 2886457 - 2886479 + r 100 -7 -6.02919 | opp_overlap 2886457 AACTCTTAAACTAAA CAGTCTTGCT CAT ATCAAGGCTG TTTTTTTATTTGTCA PMI2644 2887889 - 2886711 - | hypothetical protein TERM 3803 2887893 - 2887877 - G 70 -2.9 -5.01823 | AGAATAAGAATAAAA CCTTACG TAT CATGAGG CAAAGTCCACCACTG PMI2645 2888482 - 2887886 - | hypothetical protein PMI2646 2888961 - 2889590 + | hypothetical protein TERM 3804 2890610 - 2890597 - g 71 -5.2 -4.63486 | AGTCGCGCAACAAAA CCGC ACCAGA GCGG TAGCTATCGAGCAAG TERM 3805 2890945 - 2890931 - g 70 -5.7 -4.45771 | AGTGCAAAACATAAA GCTGA AGAAA TCAGC ACCATGGCAAAAGCA PMI2647 2889677 - 2891872 + | hypothetical protein TERM 3806 2891925 - 2891891 - f 81 -10.2 -3.09823 | opp_overlap 2891891 2891897 2891924, overlap 2891897 CGCTCTAAAAGGAGA GGAAAAGACATAGATA AAT TCTCTATGTCTTTTCG ATTGTTTCTATCGTT TERM 3807 2891891 - 2891925 + F 81 -10.2 -3.09968 | opp_overlap 2891891 2891897, overlap 2891897 2891924 CGCTCTAAAAGGAGA GGAAAAGACATAGATA AAT TCTCTATGTCTTTTCG ATTGTTTCTATCGTT TERM 3808 2891919 - 2891897 - f 82 -7.8 -4.41797 | opp_overlap 2891891 2891897, overlap 2891891 AAAAGGAGAGGAAAA GACATAGATA AAT TCTCTATGTC TTTTCGATTGTTTCT TERM 3809 2891897 - 2891919 + F 82 -7.8 -4.40311 | opp_overlap 2891897 2891891, overlap 2891891 AAAAGGAGAGGAAAA GACATAGATA AAT TCTCTATGTC TTTTCGATTGTTTCT TERM 3810 2892259 - 2892271 + G 87 -6.3 -5.24449 | opp_overlap 2892258, overlap 2892264 TTAAAACGAGAAACG CATCT TGA AGATG TTTTTTCACTTTATC TERM 3811 2893525 - 2893510 - g 70 -3.2 -4.89233 | overlap 2893512 GATGAATATGAAAAA GTCGAA AGTA TTCGTC AACAATCAGCGAAAT TERM 3812 2893850 - 2893837 - g 74 -3.8 -5.09685 | CAACAGATAGAAAAA GCAC AAAACA GTGC TCAGCTTGATGTACC TERM 3813 2895156 - 2895145 - g 71 -7.2 -3.90766 | opp_overlap 2895144 2895145 CAGGCAGAAATAGAA GCGG ATAT CCGC CTATTCCTTACTGAT TERM 3814 2896041 - 2896009 - g 70 -3.3 -4.91459 | opp_overlap 2896011 2896016, overlap 2895994 2896014 CAAGAGCTAGAAAAA CTCAATCTTGCCCTT GAG ATGGGCAATAATGTG ATGTTGTATGTCGAT PMI2648 2891965 - 2896899 + | hypothetical protein PMI2649 2898466 - 2897135 - | MFS-family transporter TERM 3815 2897452 - 2897436 - G 73 -2.1 -5.24129 | overlap 2897450 CCTCCCGAGAAAAAA GCGTAGG TAG CAAACGC TAAGATAACGAATAA TERM 3816 2898042 - 2898056 + g 74 -4.2 -5.06816 | overlap 2898037 GCAATAAATCCAACG GCAAAG GCA CGTTGC TTTTTATTGGAAAAT TERM 3817 2898535 - 2898507 - R 91 -7.4 -5.20222 | gap 1, overlap 2898508 ACCAAAGAAAGAAAA GCTCCCAG-GCCG GAGA CAGCGCTGGGAGA AAAGTAGCGATACAT TERM 3818 2898534 - 2898508 - R 89 -10.9 -3.69693 | gap 1, overlap 2898507 CCAAAGAAAGAAAAG CTCCCAG-GCCG GAGA CAGCGCTGGGAG AAAAGTAGCGATACA fixX 2898837 - 2898550 - | ferredoxin subunit for carnitine metabolism TERM 3819 2898586 - 2898597 + g 73 -5.8 -4.56775 | overlap 2898566 GCCAAACGTTCCGCG TGGG TATT CCCA TTTTTCAAGCGCACT fixC 2900126 - 2898834 - | FAD-dependent oxidoreductase subunit for carnitine metabolism TERM 3820 2900173 - 2900152 - R 100 -13.1 -4.43877 | opp_overlap 2900157 GAACTTGCAAATAAA GCAGAGAAG TTAT CTTCTCTGC TGACTAAATCAGTTA fixB 2901120 - 2900182 - | electron transfer flavoprotein alpha subunit for carnitine metabolism TERM 3821 2900849 - 2900831 - G 72 -9.6 -2.94144 | overlap 2900828 CGGTGACCTAAACGA GCGGCAAA TAA TTTGCCAC GACGCGTATTCGGCA fixA 2901905 - 2901132 - | electron transfer flavoprotein beta subunit for carnitine metabolism TERM 3822 2902270 - 2902260 - H 80 -5.4 -5.24291 | AAAATGAAAATAAAA GGTT ATA AACC GTAACATAAAATCGA TERM 3823 2902556 - 2902524 - g 85 -5.5 -5.33331 | opp_overlap 2902523 2902524 CAAAGATAATAAAAA GGCAGGAATAGAACC GAA GGTTTTTTTTCCGCC ATTAATCATTGTTGG TERM 3824 2902808 - 2902818 + G 71 -6.8 -4.1196 | opp_overlap 2902807 CTTCTTGTACATCAG CAGC TGT GCTG TTTTGGGGCTCAATT caiT 2902504 - 2904048 + | L-carnitine/gamma-butyrobetaine antiporter TERM 3825 2904436 - 2904452 + G 83 -12.3 -2.62515 | opp_overlap 2904439, overlap 2904439 AACTCAGCGATCACT GAACCGG GGG CCGGTTC TGATGTGGGCAGCTT TERM 3826 2904923 - 2904907 - g 72 -3.6 -5.10461 | overlap 2904908 CTTATTCAAGAAAAA TTCGCC CATAT GGCGAT CAAACTCAATTCAAT caiA 2904061 - 2905203 + | crotonobetainyl-CoA dehydrogenase caiB 2905273 - 2906493 + | crotonobetainyl-coa:carnitine CoA-transferase TERM 3827 2906549 - 2906495 - f 72 -7.3 -3.85114 | gap 2, overlap 2906497 AAATCGTAGAGTAAA TACCGTTAGACTCAGGTACAAGTGGCA CTA TCCCACA-ATACCTGAG-CTTACGGCA AAAGCATGGGATAAC TERM 3828 2906547 - 2906497 - f 71 -7.7 -3.50588 | gap 2, overlap 2906495 ATCGTAGAGTAAATA CCGTTAGACTCAGGTACAAGTGGCA CTA TCCCACA-ATACCTGAG-CTTACGG CAAAAGCATGGGATA TERM 3829 2906768 - 2906754 - g 93 -5.6 -5.60993 | opp_overlap 2906754 TGTGGTATAAAAAAA GGCGAC CAT GTTGCC TTACATCTTGATAAC caiC 2906571 - 2908127 + | probable crotonobetaine/carnitine-CoA ligase caiD 2908193 - 2908978 + | carnitinyl-CoA dehydratase caiE 2909018 - 2909611 + | transferase in carnitine metabolism TERM 3830 2909644 - 2909620 - T 77 -10 -2.64454 | opp_overlap 2909609 2909620, overlap 2909619 2909614 2909613 CCAATAAACCAACAG CGACAGGCAC AACAA ACGCCTGTCG TATTGCTTTATTTTA TERM 3831 2909620 - 2909644 + T 76 -8.6 -3.47652 | opp_overlap 2909620 2909619 2909614 2909613, overlap 2909609 CCAATAAACCAACAG CGACAGGC ACAACAAAC GCCTGTCG TATTGCTTTATTTTA caiF 2910067 - 2909675 - | transcriptional activator for carnitine metabolism fsaA 2911448 - 2910786 - | fructose-6-phosphate aldolase TERM 3832 2911569 - 2911548 - R 100 -10.9 -4.42238 | opp_overlap 2911568 TCAGTTTAATGAAAA TAGCGCCAT TTTC ACGGCGCTA ACAATTAAACAAAAA PMI2662 2912321 - 2911710 - | chitin binding protein TERM 3833 2912130 - 2912157 + g 75 -2.8 -5.33026 | gap 1, opp_overlap 2912130 ATCCCCTTCAATGGA TTGCGGTTC-ATA CTG TATCGGACCACAA TTTTTATTTAAATTC PMI2663 2913111 - 2912650 - | regulatory protein PMI2664 2913469 - 2914458 + | hypothetical protein TERM 3834 2914481 - 2914502 + G 100 -12.3 -4.41348 | overlap 2914483 AACATCTTTTATTTA TGGGCTGGC CTTT GCCAGCCTA TTTATTTCACACACA TERM 3835 2914483 - 2914500 + G 93 -12.7 -3.81557 | overlap 2914481 CATCTTTTATTTATG GGCTGGC CTTT GCCAGCC TATTTATTTCACACA PMI2665 2914458 - 2915600 + | hypothetical protein TERM 3836 2915813 - 2915826 + G 77 -5.3 -4.95155 | AAAGTCAAAGCATGG GGAAT ACCT ATTCC TTTTTATCGTATCGA PMI2666 2915600 - 2916751 + | lipoprotein PMI2667 2917027 - 2917821 + | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TERM 3837 2917883 - 2917846 - f 100 -15.2 -3.84825 | opp_overlap 2917846 2917851, overlap 2917851 GCTATTCATAGCAAA CAAAAGCCACTTTTCA TTTATC TGAAAAGTGGCTTTTA TTTATCACAAGATAA TERM 3838 2917846 - 2917883 + F 100 -13 -3.86346 | opp_overlap 2917846 2917851, overlap 2917851 GCTATTCATAGCAAA CAAAAGCCACTTTTCA TTTATC TGAAAAGTGGCTTTTA TTTATCACAAGATAA TERM 3839 2917878 - 2917851 - f 100 -12.9 -4.97158 | opp_overlap 2917851 2917846, overlap 2917846 TCATAGCAAACAAAA GCCACTTTTCA TTTATC TGAAAAGTGGC TTTTATTTATCACAA TERM 3840 2917851 - 2917878 + F 100 -12.9 -4.99043 | opp_overlap 2917846 2917851, overlap 2917846 TCATAGCAAACAAAA GCCACTTTTCA TTTATC TGAAAAGTGGC TTTTATTTATCACAA pacA 2917986 - 2919404 + | peptidoglycan O-acyl transferase pacB 2919391 - 2920584 + | peptidoglycan O-acyl transferase TERM 3841 2921257 - 2921233 - gT 72 -4.3 -4.78107 | opp_overlap 2921233, overlap 2921220 2921249 TACGATTAGTAAAAA CCAACCG ATAAAATTAGG CGGTTGG TTAATTAGCAACCAA PMI2670 2920559 - 2921791 + | lipoprotein TERM 3842 2921830 - 2921804 - T 85 -10.3 -3.46563 | gap 1, opp_overlap 2921804 2921810, overlap 2921810 TAGATATTATTATAA CGA-AAAGGAGC CTCA GCTCCTTTCTCG TTATGTGGACTCTCA TERM 3843 2921804 - 2921830 + T 85 -10.3 -3.51365 | gap 1, opp_overlap 2921804 2921810, overlap 2921810 TAGATATTATTATAA CGA-AAAGGAGC CTCA GCTCCTTTCTCG TTATGTGGACTCTCA TERM 3844 2921823 - 2921810 - T 85 -8.1 -4.51174 | opp_overlap 2921804 2921810, overlap 2921804 TTATTATAACGAAAA GGAGC CTCA GCTCC TTTCTCGTTATGTGG TERM 3845 2921810 - 2921823 + T 79 -8.1 -4.12397 | opp_overlap 2921810 2921804, overlap 2921804 TTATTATAACGAAAA GGAGC CTCA GCTCC TTTCTCGTTATGTGG PMI2671 2922784 - 2921858 - | methyl-accepting chemotaxis protein TERM 3846 2922910 - 2922889 - R 100 -12.3 -4.91873 | opp_overlap 2922889 TATAGCAATGAAAAA TGGCGCACC TATT GATGCGCCA TTTGTTAAAAAGGAA TERM 3847 2922889 - 2922910 + r 90 -10.1 -4.15044 | opp_overlap 2922889 TATAGCAATGAAAAA TGGCGCACC TATT GATGCGCCA TTTGTTAAAAAGGAA gntU 2924273 - 2922936 - | low-affinity gluconate transporter gntK 2924824 - 2924270 - | thermoresistant gluconokinase TERM 3848 2924862 - 2924888 + r 100 -16.8 -3.18264 | opp_overlap 2924852 TTAACTTTTTTGTAA TGTTACCCGTAA CTG TTACGGGTAACA TTACTCGATCCAGAA gntR 2926126 - 2925131 - | gluconate utilization system Gnt-I transcriptional repressor (LacI-family transcriptional regulator) TERM 3849 2925814 - 2925781 - G 70 -5.4 -4.39277 | opp_overlap 2925781 CAATATTATAAGAAA GCAGAGAAATAAGA CGCTCT TCTTCTTTTTCTGC TTGATAGCCATAGTG PMI2675 2926361 - 2927392 + | iron compound ABC transporter, substrate-binding protein PMI2676 2927389 - 2928387 + | iron compound ABC transporter, permease PMI2677 2928384 - 2929178 + | iron compound ABC transporter, ATP-binding protein TERM 3850 2929688 - 2929718 + G 86 -12.1 -3.35597 | gap 1, overlap 2929685 GTATTCTTCGCTTAT TAGGTCG-CAATGT TCCC ACATTGCCGACCTA TATTTACGCAGTCAA PMI2678 2929165 - 2929989 + | hypothetical protein modD 2929986 - 2930834 + | pyrophosphorylase TERM 3851 2930905 - 2930876 - f 77 -8 -3.92869 | gap 1, opp_overlap 2930877 2930878, overlap 2930878 TTATTGACTGATAAA GATGAGTGCCTAC ATTAG GTAAGCACTCA-C TTTGTAACTTTAACT TERM 3852 2930904 - 2930878 - f 91 -11.7 -3.55378 | opp_overlap 2930877 2930878, overlap 2930876 ATTGACTGATAAAGA TGAGTGCCTAC ATTAG GTAAGCACTCA CTTTGTAACTTTAAC TERM 3853 2930878 - 2930904 + F 76 -9.5 -3.00797 | opp_overlap 2930878 2930876, overlap 2930877 ATTGACTGATAAAGA TGAGTGCCTAC ATTAG GTAAGCACTCA CTTTGTAACTTTAAC TERM 3854 2932466 - 2932488 + G 76 -10.6 -2.60496 | overlap 2932465 2932464 CCATTATGGCGCATA CGCTTTATCG TCA CGGTGAAGCG CTATTTCAAAACCAA prrA 2930965 - 2932914 + | TonB-dependent receptor TERM 3855 2932937 - 2932965 + T 93 -9 -4.75308 | opp_overlap 2932940, overlap 2932940 2932944 ACTCAATTATAAGTA AAAGCGCTATTA AAAAA TAATAGCGCTTA TTTTTCAATATTCAT TERM 3856 2932962 - 2932940 - T 95 -10.7 -4.52781 | opp_overlap 2932940 2932937 2932944 CAATTATAAGTAAAA GCGCTATTA AAAAA TAATAGCGC TTATTTTTCAATATT TERM 3857 2932940 - 2932962 + T 95 -10.7 -4.47118 | opp_overlap 2932940, overlap 2932937 2932944 CAATTATAAGTAAAA GCGCTATTA AAAAA TAATAGCGC TTATTTTTCAATATT PMI2681 2934068 - 2933022 - | cell invasion protein TERM 3858 2933567 - 2933557 - G 85 -4 -5.54894 | AAGTCATTAAAAAAA GATT TAA AATC AAAATTCACCGTACC TERM 3859 2933803 - 2933817 + g 79 -5.8 -4.99861 | opp_overlap 2933803 2933802, overlap 2933808 AGATCATTAGAAAAT TGATTT AAA AAATCA TTTTTATCATTAATG PMI2682 2934959 - 2934129 - | type III secretion system protein PMI2683 2937143 - 2934984 - | cell invasion protein TERM 3860 2935497 - 2935485 - G 74 -9.1 -3.48144 | overlap 2935481 2935480 AATAACAAAACTCAA TGCCG TAG CGGCA ACAAATAAAACGACT TERM 3861 2935562 - 2935576 + g 95 -4.3 -5.71712 | overlap 2935554 CTTGTATTGAATTTT TCATC TCTTC GATGA TTTTTTTATCTAGCC TERM 3862 2936487 - 2936498 + g 70 -3 -5.02357 | TTCAGACTCTTTTTT GAAA TTCT TTTC TTTTATTTGGTTATA PMI2684 2937666 - 2937148 - | chaperone protein PMI2685 2938849 - 2937788 - | type III secretion system protein PMI2686 2939615 - 2938842 - | type III secretion system protein PMI2687 2939875 - 2939621 - | type III secretion system protein PMI2688 2940534 - 2939875 - | type III secretion system protein TERM 3863 2940216 - 2940206 - G 70 -5.4 -4.36372 | AAAAAAGCTAATAAA TCAG GAT CTGA GTAATGATAAAGGTA PMI2689 2941467 - 2940538 - | type III secretion system protein TERM 3864 2940913 - 2940899 - G 72 -4.4 -4.7373 | TCATCCCATGAAAAA TAAAAA TAT TTTTTA TCACCAACATTAAAA TERM 3865 2941026 - 2941039 + g 70 -2.5 -5.03715 | AAATAAAACTTGTTA TAAAA CCTA TTTTA TTTTTTGGAAATACT PMI2690 2942612 - 2941464 - | type III secretion system protein TERM 3866 2941779 - 2941795 + g 81 -5.9 -5.16841 | overlap 2941780 CATTTTGGCTACTTT TGGTAAT GCA ATTACCG TTTTTATTGGTGTAA TERM 3867 2942225 - 2942239 + g 100 -3.6 -6.08342 | overlap 2942227 GTTGTAGTTTGTATT TATCTA TCT TAGATG TTTTTTTATTTATTC TERM 3868 2942327 - 2942338 + g 85 -3 -5.79588 | overlap 2942330 CTTTTTTTATATTTA TATC TAAA GATA TTTTTTTAGTTTTAG PMI2691 2943084 - 2942623 - | type III secretion system protein TERM 3869 2942715 - 2942739 + g 88 -8.1 -5.01732 | overlap 2942720 CTAATGCTTTTCTTT CAAAATAAAGT GTC ATTTTATTTTG TTTTTTGACGGCCTT TERM 3870 2942720 - 2942734 + g 76 -2.2 -5.42198 | overlap 2942715 GCTTTTCTTTCAAAA TAAAGT GTC ATTTTA TTTTGTTTTTTGACG PMI2692 2944366 - 2943068 - | type III secretion system protein TERM 3871 2944226 - 2944252 + g 100 -14 -4.4078 | opp_overlap 2944231 AACAATAGCTTCACC GAGAATATTTTC ACT GAAAATATTCTC TTTTAGTTGGCAGAC PMI2693 2944783 - 2944370 - | type III secretion system protein PMI2694 2946891 - 2944792 - | type III secretion system protein TERM 3872 2945213 - 2945225 + g 81 -2.7 -5.58179 | ATAATAGTCTTTATG TTTCT AAT AGGAA TTTTTTCTTGTACTA TERM 3873 2946489 - 2946467 - G 90 -7.6 -5.30616 | CCATCCAAAGAAAAA CGAGCCGCGA CCT CCGCTACTCG TTCAGATCCTTTAGT PMI2695 2947994 - 2946918 - | type III secretion system protein PMI2696 2949714 - 2947999 - | type III secretion system protein TERM 3874 2949594 - 2949615 + g 81 -11.7 -2.9176 | opp_overlap 2949594, overlap 2949596 TTACCGCAACAAAAA CATCAGGTT TTTT AACCTGATG TGTATAAATAACCTT TERM 3875 2949615 - 2949594 - G 100 -11.7 -5.08601 | opp_overlap 2949594 2949596 TTACCGCAACAAAAA CATCAGGTT TTTT AACCTGATG TGTATAAATAACCTT PMI2697 2950453 - 2949698 - | type III secretion system regulatory protein TERM 3876 2950226 - 2950211 - G 70 -5.4 -4.37199 | AGCATAATCAATAAA TGCCAA TAAT CTGGCA CAAATAAAAAATGAT TERM 3877 2950275 - 2950292 + g 75 -2.8 -5.1925 | overlap 2950289 GACTGATTTTCTGAT TGAAAA ATAACA TTTTCA TTTTTTGAATTATAA TERM 3878 2951348 - 2951332 - g 81 -6.7 -4.67755 | overlap 2951339 ATAGTGATTCAAAAA CAAAAAT TTC ATTTTTG AACAAAGAAAAAATT TERM 3879 2951503 - 2951480 - g 73 -9.8 -3.22388 | opp_overlap 2951486, overlap 2951472 2951486 CATTCAAGCCATCAA TGACAATTTT CCCA AAAATTGTCA GCCAATCATAAAAGA PMI2698 2950743 - 2951816 + | hypothetical protein PMI2699 2951866 - 2952120 + | type III secretion system protein PMI2700 2952144 - 2952422 + | type III secretion system protein PMI2701 2952425 - 2953177 + | type III secretion system protein PMI2702 2953170 - 2953742 + | type III secretion system protein (oxygen-regulated invasion protein) TERM 3880 2954213 - 2954225 + G 81 -2.7 -5.55664 | TTGCTATTCATACCG GTGAT CAA ATTAC TTTTTTTGATCCTGC PMI2703 2953723 - 2954415 + | type III secretion system protein (oxygen-regulated invasion protein) TERM 3881 2954507 - 2954475 - g 72 -9.3 -3.39784 | opp_overlap 2954474 2954475, overlap 2954486 CTAGTGCTAACAATA TTTCGAGAAAAGGAT CAG ATCCTATTATCGAAA ATTTGAAACTGACTT TERM 3882 2954496 - 2954486 - g 70 -5.4 -4.39828 | opp_overlap 2954475 2954474, overlap 2954475 AATATTTCGAGAAAA GGAT CAG ATCC TATTATCGAAAATTT TERM 3883 2954708 - 2954695 - g 87 -5.3 -5.50723 | TCATGAAAATAAAAA CTTGA TTAA TCAAG CACTCGTTTCGCGAC PMI2704 2954405 - 2954836 + | hypothetical protein soxR 2955286 - 2954837 - | redox-sensitive transcriptional activator TERM 3884 2955314 - 2955331 + H 93 -9.9 -4.56629 | overlap 2955309 TTATTTTTCACTTGA CCTCAAG TTAA CTTGAGG TTTTATAGTCTTGTC TERM 3885 2955363 - 2955378 + H 77 -3.2 -5.55855 | CAATACAAAGTCAAG TCAGCC AATT GCCTGA TTTTATTTTTTTAAG TERM 3886 2955547 - 2955570 + G 73 -2.4 -5.21709 | gap 1, overlap 2955550 2955551 2955553 TTGGCAGAGATGCGT GCAG-CAGGGT TAA ACCCTGATTGG TTTTTTAATCTCGCC TERM 3887 2955551 - 2955565 + G 75 -10 -2.96783 | overlap 2955550 2955547 2955553 CAGAGATGCGTGCAG CAGGGT TAA ACCCTG ATTGGTTTTTTAATC PMI2706 2955412 - 2955834 + | hypothetical protein TERM 3888 2956292 - 2956275 - g 74 -4.9 -4.80882 | gap 1 ACTTTATAGTAAAAA TGTGGCTG CAG CAGC-ACA ATTAGATAGTACGTT PMI2707 2955880 - 2956986 + | multidrug efflux protein TERM 3889 2957944 - 2957924 - g 78 -2.5 -5.4251 | CTGATATAGAAAAAA CACTCCCAC CAG GTGTAAATG TGGAGCTGGCCTTTG TERM 3890 2959146 - 2959126 - g 72 -8.3 -3.54543 | opp_overlap 2959127 ATTGATCGTGCCAAA GCCAATACC CTT GGTATTCGC ATGCAAGATATTGGC PMI2708 2956999 - 2960076 + | multidrug efflux protein TERM 3891 2960093 - 2960141 + T 89 -7.6 -5.09895 | gap 1, opp_overlap 2960102 2960103, overlap 2960097 2960103 2960139 AATAACAAGCGCTAA TGTCGTAAACCCATCCCCATTGT AAAT ACAATGGGGATGGTTATA-GTTA TTTTTTGAATAAATA TERM 3892 2960097 - 2960138 + T 100 -11.7 -4.64763 | opp_overlap 2960102 2960103, overlap 2960093 2960103 ACAAGCGCTAATGTC GTAAACCCATCCCCATTGT AAAT ACAATGGGGATGGTTATAG TTATTTTTTGAATAA TERM 3893 2960133 - 2960102 - T 100 -16 -3.57561 | opp_overlap 2960097 2960093 2960103, overlap 2960103 CGCTAATGTCGTAAA CCCATCCCCATTGT AAAT ACAATGGGGATGGT TATAGTTATTTTTTG TERM 3894 2960103 - 2960132 + T 100 -19.5 -3.72181 | opp_overlap 2960102 2960103, overlap 2960097 2960093 GCTAATGTCGTAAAC CCATCCCCATTGT AAAT ACAATGGGGATGG TTATAGTTATTTTTT TERM 3895 2960132 - 2960103 - T 100 -19.5 -2.74322 | opp_overlap 2960103 2960097 2960093, overlap 2960102 GCTAATGTCGTAAAC CCATCCCCATTGT AAAT ACAATGGGGATGG TTATAGTTATTTTTT PMI2709 2961287 - 2960157 - | protein-tyrosine phosphatase TERM 3896 2961449 - 2961421 - R 82 -6.2 -5.1167 | gap 1, opp_overlap 2961421 AAGTGAATATAAAAA TGCCAATATTGTT GAAT AACA-TATCGGCA TTTAAAATTAAAAGA PMI2710 2961820 - 2961494 - | multidrug resistance protein PMI2711 2962318 - 2961911 - | quaternary ammonium compound resistance protein PMI2712 2963057 - 2962353 - | hypothetical protein TERM 3897 2962975 - 2963001 + g 100 -9.5 -5.28826 | overlap 2962969 TCACGATATCCCGGC GCCGGTGTT AAAACTAAC AACACCGGC TTTTTTATACACTTT pduL 2963719 - 2963075 - | propanediol utilization protein pduJ 2964225 - 2963719 - | propanediol utilization protein PMI2715 2965192 - 2964242 - | propanediol utilization protein (dehydratase activating enzyme) TERM 3898 2965286 - 2965262 - R 74 -9.3 -3.14132 | opp_overlap 2965265 2965277 TCTTGTCGCGATTAA TAGGGAGGACT CTT AGCCCTCCTTA GGTCTATGATCAGAA TERM 3899 2965265 - 2965283 + r 72 -8.8 -3.16971 | opp_overlap 2965262, overlap 2965277 TGTCGCGATTAATAG GGAGGACT CTT AGCCCTCC TTAGGTCTATGATCA PMI2716 2968724 - 2965296 - | propanediol utilization protein (dehydratase) TERM 3900 2965412 - 2965424 + g 70 -2.6 -5.12617 | CGCGGTACTTTTCAG GCTC TAATT GGGC TTTTTTCAGTACTTC PMI2717 2969924 - 2968776 - | propanediol utilization protein (alcohol dehydrogenase) TERM 3901 2969235 - 2969245 + g 79 -5.4 -5.00616 | opp_overlap 2969235, overlap 2969228 2969225 ACCTGCGATGCAAGA TGCA TTG TGCA TTTTTTCGCGAGCAA TERM 3902 2969680 - 2969695 + g 71 -6.2 -4.26076 | opp_overlap 2969677 ATAACCAAATCAGGA TAATGG GCAT CCATTA TTTTCATACCACTGA PMI2718 2970195 - 2969932 - | hypothetical protein PMI2719 2971874 - 2970222 - | aldehyde-alcohol dehydrogenase TERM 3903 2971777 - 2971791 + g 72 -8.6 -3.60364 | overlap 2971771 TTGTCGATTTTTTCC TGCGAA AAT TTCGCA TATTGTTGTTGTGCA PMI2720 2972220 - 2971942 - | microcompartments protein TERM 3904 2972232 - 2972263 + r 74 -3.8 -5.13473 | gap 1, overlap 2972261 TCATATTTATTTCCT TCGTTATTCAGTCAC TTT GT-ACTGGGCAACGA TTTTTTGAATATCGT PMI2721 2972519 - 2972235 - | microcompartments protein PMI2722 2972818 - 2972540 - | microcompartments protein PMI2723 2973920 - 2973402 - | hypothetical protein PMI2724 2974780 - 2973920 - | regulatory protein PMI2725 2975394 - 2974801 - | TetR-family transcriptional regulator TERM 3905 2975421 - 2975406 - R 71 -7.6 -3.41051 | opp_overlap 2975406 2975400 TCATGCGTAGGATAA TACCGA CCAG TCGGTA TGTTCCTTATTGATC TERM 3906 2975518 - 2975538 + r 70 -4.2 -5.00027 | opp_overlap 2975528 2975531, overlap 2975531 ATTTAAAACCAAATT TAATTTTA AATAA TAAAATTA TTTTATATTTTTGAT TERM 3907 2975738 - 2975761 + r 71 -8.2 -3.20437 | opp_overlap 2975738, overlap 2975737 GTTTTAAAATAAAAA GCCCTCTTTA AATT TAAAGAAGGC CTTTCTATTATTAAT TERM 3908 2975761 - 2975738 - R 100 -10.4 -5.45802 | opp_overlap 2975737 2975738 GTTTTAAAATAAAAA GCCCTCTTTA AATT TAAAGAAGGC CTTTCTATTATTAAT cysD 2977099 - 2975825 - | O-acetylhomoserine sulfhydrylase PMI2727 2978223 - 2977288 - | hypothetical protein TERM 3909 2977324 - 2977337 + g 72 -3.1 -5.02074 | CGATTTGCTCGTTTT TGGCA TTTT TGTCA TTTTTTGACGAGTCG TERM 3910 2977677 - 2977651 - G 93 -10.2 -5.06414 | overlap 2977655 TGCTGTTAAGAAAAA GAAAGGCACAAT ACC ATTGTGCCCCCC CGAAATAAGACGAGT TERM 3911 2977673 - 2977655 - G 100 -11.8 -5.05606 | overlap 2977651 GTTAAGAAAAAGAAA GGCACAAT ACC ATTGTGCC CCCCCGAAATAAGAC TERM 3912 2978065 - 2978050 - G 71 -7.6 -3.90352 | AGGAAAAAGAGATAA CTTAGG CACC CCTAAG ATCAAAATCAAAAAT TERM 3913 2978394 - 2978408 + H 78 -5.8 -4.85599 | opp_overlap 2978394, overlap 2978405 TCCCAATACGAGTAA TAAAAG TAT CTTTTA TTTTTATACGATAAA TERM 3914 2978830 - 2978842 + H 74 -6.3 -4.44525 | opp_overlap 2978830 2978828 ACCAGCAAAAAACGA TCGTT TAA AACGA TTTCTCTATTTTTTT TERM 3915 2979198 - 2979218 + G 70 -7.7 -3.63305 | opp_overlap 2979196 CCAACAGAAGTTACA GTTAATGGT GGT ACTATTAAC TTTGAAGGTTCTGTC atfA 2979093 - 2979653 + | major subunit of type 1 fimbria atfB 2979752 - 2980429 + | type 1 fimbrial chaperone protein TERM 3916 2981583 - 2981567 - g 76 -2.2 -5.50925 | AACCAACATAAAAAA CCTCGC TTTAT ACAAGG TCATCTTATTTATGG atfC 2980466 - 2982997 + | outer membrane usher protein PMI2731 2982997 - 2983515 + | fimbrial subunit TERM 3917 2984202 - 2984180 - g 77 -4.9 -4.93696 | opp_overlap 2984182, overlap 2984182 CGTAAATACCAAAAA TCTCACCTA TGAAT TAGGTGATA TCTCAATGCGAGATA PMI2732 2983515 - 2984588 + | fimbrial adhesin PMI2733 2984615 - 2984932 + | fimbrial operon regulator TERM 3918 2985025 - 2985043 + T 100 -14.6 -4.78107 | opp_overlap 2985025 ATACAAATATAAGAA GCCACCGT TTA ACGGTGGC TTTTTGGTACTGATA TERM 3919 2985043 - 2985025 - T 100 -14.6 -4.0777 | opp_overlap 2985025 ATACAAATATAAGAA GCCACCGT TTA ACGGTGGC TTTTTGGTACTGATA potD 2986109 - 2985066 - | spermidine/putrescine ABC transporter, substrate-binding periplasmic protein TERM 3920 2986161 - 2986147 - R 87 -10 -3.92324 | TGCGTTAATATCAAA TAGGCG TAA CGCCTA CCTCCAACAGATTTG TERM 3921 2986212 - 2986196 - R 100 -12.3 -4.66953 | opp_overlap 2986193 2986189 TCAAGACCGTAAAAA GTGCGAG AAA CTCGCAC TAATACTTTTAAATT potC 2987005 - 2986226 - | spermidine/putrescine ABC transporter, permease protein potB 2987862 - 2987002 - | spermidine/putrescine ABC transporter, permease protein potA 2988961 - 2987846 - | spermidine/putrescine ABC transporter, ATP-binding protein TERM 3922 2989395 - 2989365 - R 85 -7 -4.96106 | opp_overlap 2989365 2989387, overlap 2989387 GATAAATACTAAAAA TACCTTCCATAG TCTTAAG CCATAGAAGGTA TCCTTTCTATTAATT PMI2738 2990742 - 2989405 - | serine protease TERM 3923 2991179 - 2991168 - H 71 -3 -5.31275 | TCTGATGATAAAAAA GTAT ATCT ATAC ATCCGATGAAGAACA TERM 3924 2991319 - 2991337 + H 100 -14.6 -4.24948 | CGAGATATTTTCGAA GGGCTCCT TAT AGGAGCCC TTTTCGATCTAATAA TERM 3925 2991523 - 2991509 - H 70 -6.4 -4.26076 | TTACTCTCAGTAAAA CACCAA AAT CTGGTG TCCTCATTGGTGTCC dusA 2991572 - 2992606 + | tRNA-dihydrouridine synthase A qor 2993696 - 2992713 - | quinone oxidoreductase TERM 3926 2994447 - 2994435 - g 83 -6.3 -5.03747 | AAACCGTTGAAAAAA TAGAG CAA CTCTA CCAAAAACCTCATGA TERM 3927 2994754 - 2994764 + G 70 -5.4 -4.4078 | GGCGCGTATTTCAAG TACC ATG GGTA TTTTGCTTGAAAAAC dnaB 2993864 - 2995273 + | replicative DNA helicase TERM 3928 2995330 - 2995320 - g 75 -8.2 -4.05319 | overlap 2995321 AGAAATAACATGAAA GCGG CAA CCGC AGTAATAGATCGCCG alr 2995314 - 2996405 + | alanine racemase (biosynthetic) TERM 3929 2996995 - 2996981 - g 81 -5.7 -5.01732 | AACTTCCTGAAAAAA GCATC GTACT GATGC ACCCATGTTGCCATA tyrB 2996461 - 2997654 + | aromatic-amino-acid aminotransferase TERM 3930 2997693 - 2997728 + T 81 -9.2 -3.794 | opp_overlap 2997698, overlap 2997698 CTGATATTAGCTTAA AAAAATACCTGCCTAT TTTC ATAAGCAGGTATTTTC TTTACTGCATTACAA TERM 3931 2997698 - 2997723 + T 95 -9.1 -4.9448 | opp_overlap 2997698, overlap 2997693 ATTAGCTTAAAAAAA TACCTGCCTAT TTTC ATAAGCAGGTA TTTTCTTTACTGCAT TERM 3932 2997723 - 2997698 - T 100 -11.3 -5.44721 | opp_overlap 2997698 2997693 ATTAGCTTAAAAAAA TACCTGCCTAT TTTC ATAAGCAGGTA TTTTCTTTACTGCAT PMI2744 2999125 - 2997776 - | hypothetical protein PMI2745 3000518 - 2999187 - | hypothetical protein TERM 3933 3000971 - 3000987 + r 81 -2.3 -5.93809 | opp_overlap 3000971, overlap 3000983 3000986 TGTAATAAAACAGCA GAATTAA CTA TTTATTC TTTTTTTTATAAAAA TERM 3934 3001117 - 3001139 + r 85 -10.7 -3.53224 | opp_overlap 3001117 TTTTATAAAGAAAAA CGCTACAAA CAAAA TTTGTAGCG TTTAGACAAGAAGTG TERM 3935 3001139 - 3001117 - R 100 -11.4 -5.38054 | opp_overlap 3001117 TTTTATAAAGAAAAA CGCTACAAAC AAA ATTTGTAGCG TTTAGACAAGAAGTG uvrA 3004005 - 3001171 - | UvrABC excision repair system proteinA (excinuclease ABC subunit A) ssb 3004258 - 3004782 + | single-strand binding protein TERM 3936 3004837 - 3004858 + F 88 -6.6 -5.20222 | opp_overlap 3004837 ACATCAAACGCTAAA GCCTGTTA TACCAT TAACGGGC TTTTCTTTGTTTCAT zur 3005138 - 3005668 + | zinc uptake regulation protein TERM 3937 3005764 - 3005730 - T 70 -3.8 -5.00027 | gap 1, opp_overlap 3005730, overlap 3005717 ATTAAAAACAGAAAA TGCAGATGAT-TTTA TGTTTT TACACATCATCTGCA TCTTTTTGACGTTCT lexA 3006468 - 3005857 - | LexA repressor TERM 3938 3006571 - 3006584 + r 100 -6.7 -6.0458 | TCTTTGCATTATTTT TCGAC AATT GTCGA TTTTTTTTACTTTAT dgkA 3006967 - 3006596 - | diacylglycerol kinase plsB 3007098 - 3009581 + | glycerol-3-phosphate acyltransferase TERM 3939 3009617 - 3009649 + T 100 -12.2 -4.8543 | opp_overlap 3009617 3009622, overlap 3009622 CTATAATCAGTAATA GAAAAGGGATAAGC AATTG GCTTATCCCTTTTA TTTTTATGCAACTTC TERM 3940 3009649 - 3009617 - T 90 -12.2 -3.21684 | opp_overlap 3009617 3009622, overlap 3009622 CTATAATCAGTAATA GAAAAGGGATAAGC AATTG GCTTATCCCTTTTA TTTTTATGCAACTTC TERM 3941 3009644 - 3009622 - T 100 -12.1 -4.71186 | opp_overlap 3009617 3009622, overlap 3009617 ATCAGTAATAGAAAA GGGATAAGC AATTG GCTTATCCC TTTTATTTTTATGCA TERM 3942 3009622 - 3009644 + T 100 -12.1 -5.35224 | opp_overlap 3009622 3009617, overlap 3009617 ATCAGTAATAGAAAA GGGATAAGC AATTG GCTTATCCC TTTTATTTTTATGCA ubiA 3010549 - 3009695 - | 4-hydroxybenzoate octaprenyltransferase ubiC 3011087 - 3010578 - | chorismate--pyruvate lyase TERM 3943 3011275 - 3011248 - R 93 -7 -5.33866 | opp_overlap 3011248 3011252 CAAATTGAGAAAAAA CAAAGGAGGTCA CCAT CAACCTCCTTGG TTATAAGCGCTTAAT pgi 3012955 - 3011309 - | glucose-6-phosphate isomerase TERM 3944 3013842 - 3013821 - g 82 -6.5 -4.99134 | AGCCTAAAGGAAAAA CCACCACCT TAGG ACGTGGCGG AAGTGATTATACTGC TERM 3945 3014457 - 3014443 - g 77 -8.6 -3.92178 | opp_overlap 3014443 3014442, overlap 3014454 ACTATCGCAAGTAAA TGGCTT AGG AAGCCA GATTTTTGGCACTTT lysC 3013220 - 3014590 + | lysine-sensitive aspartokinase III TERM 3946 3014684 - 3014718 + F 100 -16 -4.87389 | opp_overlap 3014682 3014687 AATGACTTTAGAATT TAACATAGGCTTCTTG CAA TAAGGAGCCTATGTTA TTTATTTTTACAGTA TERM 3947 3014715 - 3014687 - f 83 -10.4 -3.2375 | opp_overlap 3014684, overlap 3014682 GACTTTAGAATTTAA CATAGGCTTCTT GCAAT AAGGAGCCTATG TTATTTATTTTTACA TERM 3948 3015189 - 3015176 - g 74 -3.9 -5.02231 | opp_overlap 3015176 TAAAAACATGAAAAA TGTTT TAAC AAACA ATTTTAAAAGTGAAA PMI2756 3014817 - 3015500 + | hypothetical protein TERM 3949 3015547 - 3015574 + T 87 -4.3 -5.77571 | gap 2, opp_overlap 3015547, overlap 3015562 ACAGTATTAACGTAA GCGGATGCCTTTC GATA GAAA-G-ATCCGC TTTTTATTTTTTAAT PMI2757 3016169 - 3015585 - | hypothetical protein TERM 3950 3016231 - 3016260 + r 100 -10.9 -4.29073 | opp_overlap 3016231 AACTGCGAGAGAAAA TAACAAGGGGATA TGAT TATCACCTTGTTA TTTATTACATTATTA TERM 3951 3016260 - 3016231 - R 100 -10.9 -4.53705 | opp_overlap 3016231 AACTGCGAGAGAAAA TAACAAGGGGATA TGAT TATCACCTTGTTA TTTATTACATTATTA metH 3019968 - 3016297 - | methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) TERM 3952 3020493 - 3020504 + G 70 -5.8 -4.33819 | GGTTTATGGGTAGTG GGCA CTCA TGCC TTTATTGTCGGTAGT iclR 3020232 - 3021068 + | acetate operon repressor TERM 3953 3021297 - 3021263 - f 95 -13 -2.54193 | opp_overlap 3021264, overlap 3021253 3021281 GAGTATTGCAACTGA GCTTGTTACCCGTAAC AAT GTTACCGGTAACAAGT TATTGCTAAGCGCTT TERM 3954 3021264 - 3021296 + F 100 -16.5 -3.72027 | opp_overlap 3021263 3021253 3021281 AGTATTGCAACTGAG CTTGTTACCCGTAAC AAT GTTACCGGTAACAAG TTATTGCTAAGCGCT edd 3021374 - 3023230 + | 6-phosphogluconate dehydratase TERM 3955 3023251 - 3023286 + F 77 -7.8 -4.05446 | overlap 3023254 AAAGTTTTCATTGCC TAATGAGGAGCAAG CCTATTTA TTTGCTCTTCATTA TTTCTGATTAGGAAA eda 3023309 - 3023950 + | KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase] TERM 3956 3023975 - 3024009 + T 71 -7.5 -3.48814 | gap 1, opp_overlap 3023975 3023979, overlap 3023979 TTAATTATTACCCAA TAAAGATAGGTATATC ATTC GAT-TATCTATCTTTA TTACTCTGTTTTATT aceK 3025741 - 3024023 - | isocitrate dehydrogenase kinase/phosphatase TERM 3957 3025779 - 3025761 - R 80 -7.4 -4.7373 | opp_overlap 3025763, overlap 3025749 3025763 TGACCTCATGAAAAA GAGGAGCA TCC TGCTCCTG AATTATCACCACAAA TERM 3958 3025777 - 3025763 - R 90 -10 -3.98658 | opp_overlap 3025763, overlap 3025749 3025761 ACCTCATGAAAAAGA GGAGCA TCC TGCTCC TGAATTATCACCACA TERM 3959 3025763 - 3025777 + r 77 -10 -2.59431 | opp_overlap 3025749 3025761 3025763 ACCTCATGAAAAAGA GGAGCA TCC TGCTCC TGAATTATCACCACA aceA 3027120 - 3025813 - | isocitrate lyase TERM 3960 3027174 - 3027191 + r 72 -2.7 -5.37593 | opp_overlap 3027176, overlap 3027176 TATTTGCAGTTTATA AATACGT TATG ACGTATC TTTTTTAATTTAAAA aceB 3028788 - 3027196 - | malate synthase A TERM 3961 3027445 - 3027457 + g 70 -9.1 -3.14878 | overlap 3027443 GGTTCGAGATATCTC TGCCG TGG CGGCA TCTTCCATTAGCCCA TERM 3962 3028993 - 3028943 - H 89 -9.2 -4.42748 | opp_overlap 3028945, overlap 3028944 3028983 3028985 CTATTTCAAAAATAA CTCGAGTGATCTTGGTTTGTTGAA TGA TTAAACAAACTAAGATCATGCGAA GATCACATAAAGCTC TERM 3963 3028992 - 3028944 - H 83 -10.5 -3.24926 | opp_overlap 3028945, overlap 3028943 3028983 3028985 TATTTCAAAAATAAC TCGAGTGATCTTGGTTTGTTGAA TGA TTAAACAAACTAAGATCATGCGA AGATCACATAAAGCT TERM 3964 3029093 - 3029110 + H 77 -4.1 -5.43866 | overlap 3029095 TTGGCTAAATTCAGG CTTCTAG ATGT CTAGATG TTTTTTTAGAGGTTA TERM 3965 3029295 - 3029273 - g 82 -4.2 -5.42259 | TGATGCCCAAAAAAA TAGAAACAGA AAA TCAATTTCTA CGATTGCTCTCTAAT metA 3029131 - 3030060 + | homoserine O-succinyltransferase TERM 3966 3030063 - 3030095 + T 90 -12.3 -3.01924 | opp_overlap 3030063 3030068, overlap 3030068 AACTTTAGATTAAAA TAAAACCCCAAAT TCAATTT ATTTGGGGTTTTA TATTCAAAAAAAATA TERM 3967 3030095 - 3030063 - T 100 -12.3 -4.35518 | opp_overlap 3030063 3030068, overlap 3030068 AACTTTAGATTAAAA TAAAACCCCAAAT TCAATTT ATTTGGGGTTTTA TATTCAAAAAAAATA TERM 3968 3030090 - 3030068 - T 91 -7.8 -5.16132 | opp_overlap 3030063 3030068, overlap 3030063 TAGATTAAAATAAAA CCCCAAAT TCAATTT ATTTGGGG TTTTATATTCAAAAA TERM 3969 3030068 - 3030090 + T 82 -7.8 -4.66537 | opp_overlap 3030068 3030063, overlap 3030063 TAGATTAAAATAAAA CCCCAAAT TCAATTT ATTTGGGG TTTTATATTCAAAAA PMI2766 3031221 - 3030118 - | glycerol dehydrogenase TERM 3970 3030761 - 3030741 - G 70 -8.3 -3.44146 | overlap 3030737 3030744 GTGGTGCAGAAGCAA TAATCGCGG TAT CCGCAATCA CCATATCAGGGTTCT TERM 3971 3030758 - 3030744 - G 73 -7.8 -3.8591 | overlap 3030737 3030741 GTGCAGAAGCAATAA TCGCGG TAT CCGCAA TCACCATATCAGGGT PMI2767 3031581 - 3032126 + | isopentenyl-diphosphate delta-isomerase TERM 3972 3032212 - 3032230 + F 100 -14.6 -4.11081 | opp_overlap 3032212 TCTAAACGCAAAAAA GCCAACCC ATT GGGTTGGC TTTCTCGTCTTATTT TERM 3973 3032230 - 3032212 - f 100 -14.6 -5.22039 | opp_overlap 3032212 TCTAAACGCAAAAAA GCCAACCC ATT GGGTTGGC TTTCTCGTCTTATTT TERM 3974 3034089 - 3034107 + F 87 -10.3 -3.57798 | overlap 3034082 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3975 3034886 - 3034898 + F 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3976 3035249 - 3035235 - f 71 -8.6 -2.92371 | opp_overlap 3035235 3035232 ATTCAGTTAATGATA GTATCC ATT GGATAC TGGGTTTCCCCATTC TERM 3977 3035586 - 3035610 + F 70 -4.4 -4.75954 | opp_overlap 3035582 ATTTTGAGAGACTCA TCAATATACC TCGGT GATATATTGA TTTGTTTTCAATTTT TERM 3978 3035827 - 3035845 + F 77 -4.6 -5.27335 | overlap 3035828 ATAACCACTCCTTTT TCTTCTTA TAA TAAGAAGC TTTTTCTTTAGGCAA TERM 3979 3035828 - 3035844 + F 75 -8.1 -3.75678 | overlap 3035827 TAACCACTCCTTTTT CTTCTTA TAA TAAGAAG CTTTTTCTTTAGGCA TERM 3980 3036107 - 3036090 - f 74 -9.1 -3.07291 | opp_overlap 3036090 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC purH 3038234 - 3039823 + | bifunctional purine biosynthesis protein [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase] purD 3039836 - 3041125 + | phosphoribosylamine--glycine ligase PMI2770 3041841 - 3041149 - | lipoprotein TERM 3981 3041828 - 3041814 - G 93 -11.4 -4.63218 | opp_overlap 3041813 3041811 3041809 3041806 3041814, overlap 3041793 GTCGTCTCAACAAAA GGGGAG CAA CTCCCC CTCTATTGTTCATTC TERM 3982 3041814 - 3041828 + g 79 -11.4 -2.58074 | opp_overlap 3041793 3041814, overlap 3041813 3041811 3041809 3041806 GTCGTCTCAACAAAA GGGGAG CAA CTCCCC CTCTATTGTTCATTC hupA 3042128 - 3041856 - | DNA-binding protein HU-alpha (HU-2) TERM 3983 3042296 - 3042325 + r 74 -9.5 -2.69449 | opp_overlap 3042284 3042299, overlap 3042295 3042291 AACGTCGCTTTTCAA GCACTAAATCA CGTTTTTC TGATTTAGTGC GTTAATTCTATACCG PMI2772 3042909 - 3042319 - | hypothetical protein TERM 3984 3042366 - 3042381 + g 89 -9 -4.79174 | TTCCAGATTCGCGCA GGTCTG TACG CAGACC TTTTATTAGTTCAAT nfi 3043652 - 3042984 - | endonuclease V TERM 3985 3043536 - 3043511 - G 86 -9.7 -4.04491 | opp_overlap 3043511 AATGCATAACAACAA TAGCGGCACGA GTGA CCGCACCGCTA TTTTCAAATCCGACA hemE 3044718 - 3043645 - | uroporphyrinogen decarboxylase nudC 3045592 - 3044807 - | NADH pyrophosphatase TERM 3986 3045723 - 3045707 - H 71 -5.3 -4.62069 | CCTCCATGGTAAAAA TATAAAT TGT ATTTATA AATAAGGTTCACTCG PMI2776 3045740 - 3046420 + | hydrolase thiC 3046719 - 3048671 + | thiamine biosynthesis protein TERM 3987 3048682 - 3048706 + G 73 -8.6 -3.68261 | TCTAATTCGGCTTTT GCCCCAAC CGAAAAAAA GTTGGGGC TTTACCCTGTTGTCG thiE 3048655 - 3049302 + | thiamine-phosphate pyrophosphorylase thiF 3049296 - 3050045 + | thiamine biosynthesis adenylyltransferase thiS 3050042 - 3050242 + | thiamine biosynthesis protein thiG 3050244 - 3051023 + | thiazole biosynthesis TERM 3988 3051217 - 3051243 + G 77 -8.1 -4.21142 | opp_overlap 3051216 3051217, overlap 3051218 TGCCCAGCAACTAAC TCGACAACGTT TTGGT AATGTTGTCGG TTTATATGTTCCACT TERM 3989 3051218 - 3051242 + G 73 -9.4 -3.11962 | opp_overlap 3051216 3051217, overlap 3051217 GCCCAGCAACTAACT CGACAACGTT TTGGT AATGTTGTCG GTTTATATGTTCCAC TERM 3990 3051354 - 3051379 + G 72 -9.1 -3.39521 | ATGAAAACGAAATCC TTGCTGAATGT CATA GCATTCGGCAA TTAGGTTTTGATAGC thiH 3051023 - 3052141 + | thiazole biosynthesis protein TERM 3991 3052201 - 3052153 - T 76 -6.2 -4.68124 | opp_overlap 3052153 3052158 TTAATAGAGATAAAA TAATACCGCGTTTTAATTTATT TTTTT AATAAATATAATCGCGGTTTTA TTACATAACACATAG TERM 3992 3052158 - 3052196 + T 76 -6.1 -4.67982 | opp_overlap 3052153, overlap 3052153 AGAGATAAAATAATA CCGCGTTTTAATTTATT TTTTT AATAAATATAATCGCGG TTTTATTACATAACA PMI2783 3053268 - 3052300 - | transposase/plasmid-related protein TERM 3993 3053338 - 3053314 - R 100 -7.3 -5.71712 | GCTTACAGAAAAAAA TGACCTTTTAC TTA GTAAAAAATCA TCATAAATATCTGAA TERM 3994 3053410 - 3053433 + r 100 -14 -4.33258 | opp_overlap 3053410 AAAAGAGCAAAAAAA TACCCTCGAT AACT ATCGAGGGTA TTTATATTTAAAACT TERM 3995 3053433 - 3053410 - R 100 -14 -5.69023 | opp_overlap 3053410 AAAAGAGCAAAAAAA TACCCTCGAT AACT ATCGAGGGTA TTTATATTTAAAACT rpoC 3057691 - 3053462 - | DNA-directed RNA polymerase beta' subunit TERM 3996 3053519 - 3053501 - G 75 -10.4 -3.18383 | opp_overlap 3053500 3053499, overlap 3053514 ACCCGCATTCAGCAA TTCTGCTA AGT TAGCAGAA GCTTCATCTGCACTG TERM 3997 3057103 - 3057131 + g 72 -8.9 -3.30159 | GCAGCGTTTCACACT CTTGTTCCAGATC CAT GCTCTGTAACAAG TTCTGAACAGCTTCA TERM 3998 3057774 - 3057799 + r 95 -11.9 -3.74872 | opp_overlap 3057779 TGTAGTCACTGTTTA GCAGACTGCCA TATT TAGCAGTCTGC TTTCATGGAATACGT rpoB 3061842 - 3057814 - | DNA-directed RNA polymerase, beta-subunit TERM 3999 3062161 - 3062136 - R 100 -11.9 -4.64766 | overlap 3062153 3062156 CTTACAGCGCAAAAA GGCTGGTGACC AAAA AATCACCAGCC ATCAGCCGTTAGGCT TERM 4000 3062187 - 3062153 - R 72 -3.5 -5.14563 | gap 1, opp_overlap 3062163, overlap 3062136 3062156 CTGGTGACCAAAAAA TCACCAGCCATCAGCC GTTA GGCTGCTCTCTGG-GA AGTTAAATTACTTAA rplL 3062560 - 3062195 - | 50S ribosomal subunit protein L7/L12 rplJ 3063121 - 3062624 - | 50S ribosomal subunit protein L10 TERM 4001 3062675 - 3062686 + g 73 -7.2 -4.04927 | opp_overlap 3062668 AGTACGAACCAGTTT GCCG GCAG CGGC TTCTTTCATGGTTGA TERM 4002 3063159 - 3063144 - R 74 -9 -3.14132 | TTGCTCCTGGATTAA CCGAGT AAAA ACTCGG GACTCACATCACTTA TERM 4003 3063410 - 3063382 - R 90 -12.6 -3.30038 | overlap 3063377 CATAGCTAAACTCAA GGCGTCAAATTC TATAC AAATTTGACGCC AAGGTAAAGTCTTTT rplA 3064150 - 3063449 - | 50S ribosomal protein L1 TERM 4004 3063631 - 3063647 + g 77 -5.2 -4.98255 | CAACTTTACCGATAG TGGTAT GGATA ATACCA TTTTTGTCGTTACGG rplK 3064583 - 3064155 - | 50S ribosomal protein L11 TERM 4005 3064338 - 3064366 + g 77 -8.2 -4.25104 | overlap 3064339 TTTCACGCCCGCCGC TTTCTTCAGCAG AATCG CTGCTGGAGGAG TTTTAGTCACGAAAG TERM 4006 3064339 - 3064365 + g 73 -9.5 -3.14848 | overlap 3064338 TTCACGCCCGCCGCT TTCTTCAGCAG AATCG CTGCTGGAGGA GTTTTAGTCACGAAA TERM 4007 3064541 - 3064553 + g 73 -7.7 -3.84712 | GATTAGCCATACCTG CTGCA ACT TGCAG TTTGATATAGGCTTG TERM 4008 3064706 - 3064668 - R 82 -7.6 -4.41817 | opp_overlap 3064673 CAAAACAACTCAAAA CGAAAGGTGGAAAATT GTAGTGA ACTTTTCCACCTTTTG CAAGAAAGGCGAGTA nusG 3065274 - 3064729 - | transcription antitermination protein secE 3065659 - 3065282 - | preprotein translocase SecE subunit TERM 4009 3065819 - 3065867 + r 93 -9.8 -4.56597 | opp_overlap 3065821 CAATTCGTTGTATCA GAGCCTATCTCACCAATAATTT CCAGA AAACTAGTGATGAGATAGGTTC TTTTTCAAACAACGC TERM 4010 3065865 - 3065821 - R 74 -9.5 -2.78463 | opp_overlap 3065819 ATTCGTTGTATCAGA GCCTATCTCACCAATAATTTC CAG AAAACTAGTGATGAGATAGGT TCTTTTTCAAACAAC TERM 4011 3065890 - 3065907 + r 95 -11.3 -3.91488 | opp_overlap 3065890 AACAACGCATAAAAA GGGCATC AATT GATGCCC TTCTTTAGGAAAATT TERM 4012 3065907 - 3065890 - R 100 -11.3 -4.94222 | opp_overlap 3065890 AACAACGCATAAAAA GGGCATC AATT GATGCCC TTCTTTAGGAAAATT tufB 3067116 - 3065932 - | elongation factor Tu TERM 4013 3067088 - 3067101 + g 78 -3.9 -5.27335 | ACGTTAACGTGCGGT TTTGA ACGT TCAAA TTTTTCTTTAGACAC TERM 4014 3067158 - 3067134 - R 100 -14.3 -3.03771 | opp_overlap 3067131 CTATATTCCTTAATA TCGCTCCCTCT CAC AGAGGGAGCGT AAACTAAATTGAACT fusA 3069298 - 3067184 - | elongation factor G (EF-G) TERM 4015 3069350 - 3069334 - R 95 -12.3 -3.68619 | TTCAATTCAGGTAAA GGACAGC ATA GCTGTCC TGAAAAGAGTTGCGA rpsG 3069848 - 3069378 - | 30S ribosomal subunit protein S7 rpsl 3070322 - 3069948 - | 30S ribosomal protein S12 PMI2796 3070743 - 3070450 - | intracellular sulfur oxidation protein PMI2797 3071133 - 3070774 - | intracellular sulfur oxidation protein PMI2798 3071534 - 3071142 - | intracellular sulfur oxidation protein PMI2799 3072248 - 3071544 - | hypothetical protein TERM 4016 3072330 - 3072311 - H 73 -8 -3.37796 | opp_overlap 3072310 TCTTATTATTTATAA TGATTCAT CTTC ATGAATCA ATTCAATATTAAAAT PMI2800 3072867 - 3073748 + | hypothetical protein TERM 4017 3073760 - 3073780 + T 93 -8.3 -5.26875 | opp_overlap 3073760 ATAAACAAACAAAAA TGCTGGAAT AGT ACTCCAGCA TTTTTTCATTAAGCA TERM 4018 3073780 - 3073760 - T 100 -10.5 -5.56573 | opp_overlap 3073760 ATAAACAAACAAAAA TGCTGGAAT AGT ACTCCAGCA TTTTTTCATTAAGCA fkpA 3074550 - 3073801 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3074887 - 3075105 + | hypothetical protein TERM 4019 3075162 - 3075131 - T 100 -13.2 -3.68073 | opp_overlap 3075138, overlap 3075138 GACTGTAGGCAAGAA CAAAAAAGGAGCGT TATC ACGCTCCTTTTTCA ATGGTTTCACAAGAT TERM 4020 3075155 - 3075138 - T 100 -11.3 -5.64873 | opp_overlap 3075138, overlap 3075131 GGCAAGAACAAAAAA GGAGCGT TATC ACGCTCC TTTTTCAATGGTTTC TERM 4021 3075138 - 3075155 + T 100 -11.3 -4.72386 | opp_overlap 3075138 3075131 GGCAAGAACAAAAAA GGAGCGT TATC ACGCTCC TTTTTCAATGGTTTC slyD 3075818 - 3075177 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4022 3075916 - 3075901 - R 75 -2.6 -5.58454 | gap 1, overlap 3075902 GTTATATCAAAAAAA CCTACAA TTA TTGT-GG TGTAAAGATCCCGAT PMI2804 3076111 - 3075908 - | hypothetical protein kefB 3077963 - 3076116 - | glutathione-regulated potassium-efflux system protein TERM 4023 3076702 - 3076712 + g 70 -5.4 -4.44046 | TCATGCTCTAATACG GTCA CAT TGAC TTTATTTGCCATAAG kefG 3078528 - 3077968 - | glutathione-regulated potassium-efflux system ancillary protein TERM 4024 3079765 - 3079748 - g 75 -9.9 -3.41051 | TTAGCTCCACTACAA GGAAAGG TTGC CCTTTCC AAAGGGATCAAATTA PMI2807 3078650 - 3080581 + | ABC transporter ATP-binding protein PMI2808 3080908 - 3082599 + | methyl-accepting chemotaxis protein TERM 4025 3082681 - 3082708 + F 88 -9.3 -4.18488 | opp_overlap 3082683 GACCTCTACCGTTAA TACCTTCAATC AAATAA GATTGGAGGTA TTTCTTAAAATCAAT TERM 4026 3083221 - 3083209 - g 72 -3.4 -5.10064 | opp_overlap 3083189 3083186 3083209 TTGAACAGATAAAAA CCAT GGATT ATGG TTATGCCGCATTAAA TERM 4027 3083624 - 3083639 + G 72 -3.2 -5.01422 | opp_overlap 3083618, overlap 3083618 GGGTAATTATCAACG CGCG TTGATCTT CGCG TTTATTTTTATGTCG PMI2809 3083055 - 3084782 + | methyl-accepting chemotaxis protein TERM 4028 3084850 - 3084797 - f 100 -16 -2.5409 | gap 2, opp_overlap 3084801 3084804, overlap 3084813 ACAAGTGCTAATCTA TTTAT-AT-GTATATCAACACCTCAT AAAA ATGAGGTGTTGATATACTATTATAAA CTGTGAAATTGGGCT TERM 4029 3084801 - 3084843 + F 100 -17.5 -3.34962 | gap 1, opp_overlap 3084797 3084813, overlap 3084804 GTGCTAATCTATTTA TATGTATATCAACACCTCAT AAAA ATGAGGTGTTGATATAC-TA TTATAAACTGTGAAA TERM 4030 3084804 - 3084841 + F 100 -21.7 -3.24365 | opp_overlap 3084797 3084813, overlap 3084801 CTAATCTATTTATAT GTATATCAACACCTCAT AAAA ATGAGGTGTTGATATAC TATTATAAACTGTGA TERM 4031 3084832 - 3084813 - f 85 -10.8 -3.28912 | opp_overlap 3084804 3084801, overlap 3084797 TTATATGTATATCAA CACCTCAT AAAA ATGAGGTG TTGATATACTATTAT PMI2810 3085012 - 3085728 + | hypothetical protein TERM 4032 3086199 - 3086141 - g 77 -6.49999 -4.65584 | gap 2, opp_overlap 3086147 3086150 3086158 3086162, overlap 3086155 3086158 3086162 ATAAATGATATAAAA CCTTATCTATTAGAGAAGAAAGCATCTAC TTA GTAGATACTTTCTTCTCTAATAC-TATA- TCCTGATGTGGATGC TERM 4033 3086147 - 3086195 + G 100 -19.3 -2.97188 | opp_overlap 3086141 3086155 3086158 3086162, overlap 3086150 3086158 3086162 GATATAAAACCTTAT CTATTAGAGAAGAAAGCATCTAC TTA GTAGATACTTTCTTCTCTAATAC TATATCCTGATGTGG PMI2811 3085736 - 3086173 + | hypothetical protein TERM 4034 3086150 - 3086192 + T 100 -21 -2.71744 | opp_overlap 3086141 3086155 3086158 3086162, overlap 3086147 3086158 3086162 ATAAAACCTTATCTA TTAGAGAAGAAAGCATCTAC TTA GTAGATACTTTCTTCTCTAA TACTATATCCTGATG TERM 4035 3086187 - 3086155 - T 100 -17.3 -2.80935 | opp_overlap 3086150 3086147 3086158 3086162, overlap 3086141 3086158 3086162 ACCTTATCTATTAGA GAAGAAAGCATCTAC TTA GTAGATACTTTCTTC TCTAATACTATATCC TERM 4036 3086158 - 3086184 + T 89 -11 -3.56987 | opp_overlap 3086155 3086141 3086158 3086162, overlap 3086150 3086147 3086162 TTATCTATTAGAGAA GAAAGCATCTAC TTA GTAGATACTTTC TTCTCTAATACTATA TERM 4037 3086184 - 3086158 - T 100 -13.2 -3.55447 | opp_overlap 3086158 3086150 3086147 3086162, overlap 3086155 3086141 3086162 TTATCTATTAGAGAA GAAAGCATCTAC TTA GTAGATACTTTC TTCTCTAATACTATA TERM 4038 3086162 - 3086180 + T 72 -6 -4.41114 | opp_overlap 3086158 3086155 3086141 3086162, overlap 3086158 3086150 3086147 CTATTAGAGAAGAAA GCATCTAC TTA GTAGATAC TTTCTTCTCTAATAC TERM 4039 3086180 - 3086162 - T 85 -8.2 -4.41114 | opp_overlap 3086162 3086158 3086150 3086147, overlap 3086158 3086155 3086141 CTATTAGAGAAGAAA GCATCTAC TTA GTAGATAC TTTCTTCTCTAATAC PMI2812 3086649 - 3086170 - | hypothetical protein TERM 4040 3086808 - 3086827 + r 100 -10.8 -4.77867 | opp_overlap 3086805 3086802 3086808 3086810 TTAATCAAATAATTA CACCTCAT AAAA ATGAGGTG TTTTATATTATCTGT TERM 4041 3086827 - 3086808 - R 84 -10.8 -3.07256 | opp_overlap 3086808, overlap 3086805 3086802 3086810 TTAATCAAATAATTA CACCTCAT AAAA ATGAGGTG TTTTATATTATCTGT aer 3088428 - 3086884 - | aerotaxis receptor TERM 4042 3088271 - 3088283 + g 70 -9.1 -3.2244 | opp_overlap 3088271 3088268 3088266, overlap 3088267 TGTCTGACAATATTA TGGGG TTG CCCCA TTAACTCTTGTGCTG TERM 4043 3088572 - 3088557 - R 75 -4.8 -4.93696 | opp_overlap 3088557 TTTAAATATTAAAAA TTTGAA TCAG TTCAAA TAAATTAATCATCCA PMI2814 3089437 - 3088577 - | RpiR-family transcriptional regulator TERM 4044 3089579 - 3089563 - R 79 -6.7 -4.68724 | opp_overlap 3089562, overlap 3089572 CTACTCAATAGAAAA TGTTAAT AAT ATTAACA ATACCTTTATAATAA TERM 4045 3090116 - 3090100 - R 85 -3.1 -6.02546 | CTAAACTAAAAAAAA TATTATT TAC AACAATA AAAAGAAATTAAATC PMI2815 3090755 - 3090150 - | LysE-type translocator TERM 4046 3091267 - 3091251 - g 70 -7.9 -3.62522 | opp_overlap 3091251 3091245, overlap 3091240 CAATTTGGCGAACAA CCAACCG CAG CGGTAGG TTACTCTTTAGGAGG TERM 4047 3091323 - 3091339 + G 72 -8.7 -3.52874 | opp_overlap 3091323 3091322 GAAAGTGGTGAAAAT GCGGTAT TAG ATGCCGC TGTTATTGTGTCCGC PMI2816 3090855 - 3091835 + | hydrolase PMI2817 3091832 - 3092053 + | hypothetical protein prkB 3092127 - 3092996 + | probable phosphoribulokinase TERM 4048 3093023 - 3093049 + T 71 -5.3 -4.67943 | opp_overlap 3093023, overlap 3093018 TATTTGTGACGAAAA TAATATCCC CGTATTTTA GGGATATTA TTTTATATATTAAAA PMI2819 3093492 - 3093085 - | OsmC-like protein crp 3093805 - 3094437 + | catabolite gene activator (cAMP receptor protein) TERM 4049 3094492 - 3094510 + T 100 -11 -4.37198 | opp_overlap 3094491 TTATTTTGTATGAAG CCCCATCG CAA TGATGGGG TTTTACATTTGAATT argD 3095742 - 3094525 - | acetylornithine/succinyldiaminopimelate aminotransferase TERM 4050 3095820 - 3095806 - R 77 -2.9 -5.54885 | AATATGAATAAAAAA TCAAA TAAGG TTTGA TATAAAAGTGGATAA pabA 3096435 - 3095860 - | para-aminobenzoate synthase glutamine amidotransferase component II TERM 4051 3096302 - 3096313 + g 72 -4.4 -4.70534 | opp_overlap 3096297, overlap 3096297 3096301 GAGATAACAAGATGT GATG GCAT CATC TTTTCTATCTCTTTA TERM 4052 3096725 - 3096761 + r 91 -12.6 -3.38088 | gap 1, opp_overlap 3096728, overlap 3096728 3096737 AATTTTTTTGATCGA CA-ATATCCAGAATGTG AGAA CGCATTCTGGATATCTG TTCATTGACTGGCTT TERM 4053 3096728 - 3096757 + r 100 -14.5 -3.19081 | opp_overlap 3096728, overlap 3096725 3096737 TTTTTTGATCGACAA TATCCAGAATGTG AGAA CGCATTCTGGATA TCTGTTCATTGACTG TERM 4054 3096757 - 3096728 - R 90 -12.3 -3.35679 | opp_overlap 3096728 3096725 3096737 TTTTTTGATCGACAA TATCCAGAATGTG AGAA CGCATTCTGGATA TCTGTTCATTGACTG ppiA 3097380 - 3096808 - | peptidyl-prolyl cis-trans isomerase A TERM 4055 3096970 - 3096956 - G 73 -5.7 -4.49389 | ACCGCATAACCAAAA TCACG TTGAC CGTGA TCTAAAAAGGCATTA engB 3097655 - 3098278 + | probable GTP-binding protein TERM 4056 3098362 - 3098396 + F 77 -10 -2.75074 | opp_overlap 3098364, overlap 3098359 AATTTTAGATAAAAA AATGCCCCAGTCGA AATAAAG TCGACTGGGGCAGC TAATATTCAGCTAAA TERM 4057 3098394 - 3098364 - f 100 -17 -5.71712 | opp_overlap 3098362 3098359 TTTTAGATAAAAAAA TGCCCCAGTCGA AATAAAG TCGACTGGGGCA GCTAATATTCAGCTA TERM 4058 3098662 - 3098638 - f 77 -4.3 -5.26119 | opp_overlap 3098642 3098643 3098658, overlap 3098643 TGCTTAAAAATAAAA CAAATCACACA AAA TGTGCGGTTTA TACAAACTAATTTTG def 3098737 - 3099255 + | peptide deformylase TERM 4059 3099309 - 3099328 + T 95 -5.7 -5.8096 | ACTTTTATAGTGTAA GCTCAGT CAAACA ACTGGGC TTTTTATTTTTTATC TERM 4060 3099415 - 3099390 - T 93 -11.1 -3.97308 | opp_overlap 3099390 TTTAAATATAGCAAA GCGGGAAAACC TTAT GGCTATCCCGC TTAAATTCATCAGTT TERM 4061 3099390 - 3099415 + T 77 -8.9 -3.21466 | opp_overlap 3099390 TTTAAATATAGCAAA GCGGGAAAACC TTAT GGCTATCCCGC TTAAATTCATCAGTT polA 3102275 - 3099477 - | DNA polymerase I TERM 4062 3099682 - 3099692 + g 85 -5.4 -5.20216 | ATCCAATTATCCACC GCAA TCA TTGC TTTTTTAATGATATC PMI2827 3102996 - 3102598 - | hypothetical protein TERM 4063 3103593 - 3103617 + r 100 -12.2 -4.98522 | opp_overlap 3103593 TGAAGAATAAAAAAA TGGCACTCAC AAACA GTGGGTGCCA TTTTTATCTAACATT TERM 4064 3103617 - 3103593 - R 100 -10 -5.95946 | opp_overlap 3103593 TGAAGAATAAAAAAA TGGCACTCAC AAACA GTGGGTGCCA TTTTTATCTAACATT dsbA 3104300 - 3103677 - | thiol:disulfide interchange protein rdoA 3105316 - 3104321 - | phosphotransferase TERM 4065 3105205 - 3105193 - G 71 -4.1 -4.84529 | CCATAAACTGAAAAA CACGA TTT TCGTA GCTGTTTAATTCCGT PMI2830 3105600 - 3105331 - | hypothetical protein TERM 4066 3105672 - 3105660 - H 70 -4.1 -5.0916 | TCTCTAAGAGAAAAA GACAA CCT CTGTC AATCTGCGTAAATAT TERM 4067 3105678 - 3105692 + H 95 -8.6 -5.01732 | AACCTCTGTCAATCT GCGTAA ATA TTACGC TTTTTTAAAAAAATT mobA 3105819 - 3106403 + | molybdopterin-guanine dinucleotide biosynthesis protein A mobB 3106415 - 3106933 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4068 3106944 - 3106971 + T 78 -7 -4.43189 | opp_overlap 3106944 AATAGCCATAAAAAA CGCTAAAGAAAG TTGC CCTTCTCTAGCG TTTTATAAAATTGGT TERM 4069 3106971 - 3106944 - T 100 -11.4 -5.30686 | opp_overlap 3106944 AATAGCCATAAAAAA CGCTAAAGAAAG TTGC CCTTCTCTAGCG TTTTATAAAATTGGT PMI2833 3107517 - 3107020 - | endoribonuclease aad 3108979 - 3107558 - | amino acid deaminase TERM 4070 3109369 - 3109344 - R 100 -10.5 -5.48213 | opp_overlap 3109344 TAGCTAAAATAAAAA GCGAATACCAC TATA GTAGTACTCGC TTTTTAATTAAATGT TERM 4071 3109344 - 3109369 + r 80 -6.1 -4.89009 | opp_overlap 3109344 TAGCTAAAATAAAAA GCGAATACCAC TATA GTAGTACTCGC TTTTTAATTAAATGT gor 3110744 - 3109392 - | glutathione reductase TERM 4072 3110344 - 3110356 + g 70 -2.7 -5.07107 | overlap 3110351 GTGGCGATAAGTATA TTATC TGC GGTAA TTTTTTCACCGTTTA PMI2836 3111732 - 3110890 - | hypothetical protein PMI2837 3111913 - 3112305 + | hypothetical protein TERM 4073 3112317 - 3112346 + F 82 -8.8 -4.0342 | opp_overlap 3112317 ATAATGCCCCGTAAA TTCCCATTATGT TAAGCC ATATAATGGGAA TTATTATTCATTCGA PMI2838 3112582 - 3113604 + | hypothetical protein PMI2839 3113684 - 3113890 + | tautomerase TERM 4074 3113916 - 3113954 + T 95 -10.5 -4.26351 | opp_overlap 3113921, overlap 3113921 TAACATATAACGATA AAAAAGCTGAAAATAGC GTTAG GCTATTTCCAGCTTTTA TTTATTAAGTTAATG TERM 4075 3113921 - 3113949 + T 100 -10.4 -5.10665 | opp_overlap 3113921, overlap 3113916 TATAACGATAAAAAA GCTGAAAATAGC GTTAG GCTATTTCCAGC TTTTATTTATTAAGT TERM 4076 3113949 - 3113921 - T 100 -12.6 -5.39755 | opp_overlap 3113921 3113916 TATAACGATAAAAAA GCTGAAAATAGC GTTAG GCTATTTCCAGC TTTTATTTATTAAGT PMI2840 3115494 - 3113983 - | insulinase (Peptidase family M16) TERM 4077 3115641 - 3115630 - R 73 -4.4 -5.10163 | AACGCTAAAATAAAA TCAC TCAC GTGA TTAGAGTCATAGTGG PMI2841 3116378 - 3115668 - | signal sensing protein TERM 4078 3116545 - 3116508 - R 77 -4.3 -5.28166 | opp_overlap 3116509 3116511, overlap 3116511 TAAAATCAATAAAAA GAATTATCTGGCTAT AAACACAA ATAGCCAGATAATAT TCATCTTTTTTAGAT TERM 4079 3116509 - 3116544 + r 73 -7.8 -3.66995 | opp_overlap 3116508 3116511, overlap 3116511 AAAATCAATAAAAAG AATTATCTGGCTAT AAACACAA ATAGCCAGATAATA TTCATCTTTTTTAGA TERM 4080 3116542 - 3116511 - R 95 -10.4 -4.67357 | opp_overlap 3116509 3116511, overlap 3116508 AATCAATAAAAAGAA TTATCTGGCTAT AAACACAA ATAGCCAGATAA TATTCATCTTTTTTA TERM 4081 3116511 - 3116542 + r 85 -10.4 -3.39574 | opp_overlap 3116511 3116508, overlap 3116509 AATCAATAAAAAGAA TTATCTGGCTAT AAACACAA ATAGCCAGATAA TATTCATCTTTTTTA PMI2842 3118305 - 3116611 - | haemagglutinin TERM 4082 3117281 - 3117297 + g 71 -6.6 -4.00299 | TGATCAGCAACTCTC CTAGCT TCAGT AGCTAG TTCTCTTATTTTCTT TERM 4083 3118401 - 3118372 - R 76 -5.3 -4.99035 | gap 1, opp_overlap 3118372 CTAGTCATATAAAAA TAAGAACAAC-ATA TAA TATCATTGTTCTTA TTTTATAAACCAAAT dppF 3119433 - 3118432 - | dipeptide ABC transporter, ATP-binding protein dppD 3120409 - 3119426 - | dipeptide ABC transporter, ATP-binding protein dppC 3121324 - 3120422 - | dipeptide ABC transporter, permease protein TERM 4084 3121283 - 3121305 + g 70 -8.5 -3.37556 | gap 1 AAAGGGGGTCATTGG CACCGGTGCA CTAA TG-ACCGGTG TTACGTTATTTTCAG dppB 3122354 - 3121335 - | dipeptide ABC transporter, permease protein TERM 4085 3122418 - 3122403 - R 81 -10.4 -2.92102 | overlap 3122392 3122402 3122405 ATAGCGCTGATAAAT CAGGGG AAAG CCCCTG CGCTCACAGTGTACT dppA 3124131 - 3122524 - | dipeptide ABC transporter, substrate-binding protein TERM 4086 3122909 - 3122924 + g 72 -3.3 -5.03314 | TCATAACTAACGATC TTGGT TTTCAC ACCAA TTTTTTCCCAGTCAG TERM 4087 3124166 - 3124191 + r 75 -2.5 -5.56263 | TCTGTTGTGTTTTTT GGTTTCCTGTT TAAA AACGGAATACC TTTTTATTTTGTCAT TERM 4088 3124533 - 3124556 + r 89 -11.2 -3.6959 | opp_overlap 3124533 CTCCGTTAATCCAAA GAGAGAAAAA TACC TTTTTCTCTC TTTGACTACTAGTAT TERM 4089 3124556 - 3124533 - R 89 -11.2 -3.75153 | opp_overlap 3124533 CTCCGTTAATCCAAA GAGAGAAAAA TACC TTTTTCTCTC TTTGACTACTAGTAT PMI2848 3126336 - 3124654 - | two-partner secretion system accessory protein TERM 4090 3126552 - 3126532 - H 100 -15.5 -4.67635 | opp_overlap 3126532 CTTAAAACGACAAAA CCCCGCTTT AAA AAAGCGGGG TTTCTAAATATGGTC TERM 4091 3126532 - 3126552 + H 100 -15.5 -3.95787 | opp_overlap 3126532 CTTAAAACGACAAAA CCCCGCTTT AAA AAAGCGGGG TTTCTAAATATGGTC PMI2849 3126939 - 3127241 + | hypothetical protein TERM 4092 3127294 - 3127243 - T 72 -3.7 -5.23943 | gap 2, opp_overlap 3127286 CAGCAAAAAAATAAA TATAAATAATGACTAAATAATAA ATAAGTGA TTAT-ATTTAGTC-TTATTTATA ATAATTAGGTTTTAT PMI2850 3127628 - 3127299 - | lipoprotein TERM 4093 3129220 - 3129236 + G 79 -9.4 -3.67175 | overlap 3129232 3129233 TAGGTCTTGCTGGCG GGCCAC TGATC GTGGCC TTGATTTTAGGCCGT PMI2851 3128007 - 3129665 + | permease TERM 4094 3129898 - 3129923 + T 100 -10.5 -5.23396 | CCTCGTTATTGTCTT TGCCCCTTC TTCTCGCT GAAGGGGCA TTTTTATTACTTATT avtA 3131191 - 3129938 - | valine--pyruvate aminotransferase tag 3131945 - 3131364 - | DNA-3-methyladenine DNA glycosylase I glyQ 3132196 - 3133101 + | glycyl-tRNA synthetase alpha subunit TERM 4095 3133586 - 3133574 - g 71 -4.8 -4.55295 | GGGGTGATAAAGAAA CGCA TTTTG TGCG TCCAGTGCATACTGT glyS 3133111 - 3135183 + | glycyl-tRNA synthetase beta subunit TERM 4096 3135216 - 3135239 + F 100 -11 -5.63103 | opp_overlap 3135211 3135216 TACAACAACATAAAA CCGGCATTGC GAAA GCAGTGCTGG TTTTTTTACTTAAAA TERM 4097 3135239 - 3135216 - f 83 -6.6 -4.82162 | opp_overlap 3135216, overlap 3135211 TACAACAACATAAAA CCGGCATTGC GAAA GCAGTGCTGG TTTTTTTACTTAAAA PMI2856 3135345 - 3135731 + | hypothetical protein PMI2857 3135724 - 3136044 + | regulatory protein TERM 4098 3136065 - 3136088 + T 100 -8.8 -5.52023 | opp_overlap 3136065 TCAAAAGAATAAAAA CCGACATTGC GAAA GCAGTGCCGG TTTTTTATTGGTGAT TERM 4099 3136088 - 3136065 - T 100 -8.8 -5.4593 | opp_overlap 3136065 TCAAAAGAATAAAAA CCGACATTGC GAAA GCAGTGCCGG TTTTTTATTGGTGAT PMI2858 3136527 - 3136093 - | hypothetical protein PMI2859 3137404 - 3136520 - | endonuclease/exonuclease/phosphatase PMI2860 3138907 - 3137621 - | hypothetical protein TERM 4100 3139324 - 3139338 + G 91 -6.4 -5.5208 | TTCTCATTTTAGACT CCATCG GAT TGATGG TTTTTTCTATTATCG PMI2861 3139044 - 3139661 + | hypothetical protein TERM 4101 3139784 - 3139797 + F 71 -3.1 -5.23765 | ATTTGTATGTTAATA TTGGG CTTA CTCAA TTTTTCTCTTATTTC gmk 3139962 - 3140585 + | guanylate kinase TERM 4102 3140861 - 3140827 - g 82 -8.6 -4.20696 | overlap 3140828 TGATTAACGGTAAAA TTCTTGATGCTCGTGA ACG TCAAGAGCAGCAAGAG CAAGAAGCCGCAGAA TERM 4103 3140860 - 3140828 - g 83 -12.1 -3.11936 | overlap 3140827 GATTAACGGTAAAAT TCTTGATGCTCGTGA ACG TCAAGAGCAGCAAGA GCAAGAAGCCGCAGA rpoZ 3140640 - 3140915 + | DNA-directed RNA polymerase omega chain spoT 3140945 - 3143071 + | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase TERM 4104 3143455 - 3143441 - g 82 -4.2 -5.4505 | TGGGGCAAGAAAAAA CCGGTA TAT CACCAG AAGCTATTGCGCTGG trmH 3143074 - 3143793 + | tRNA (guanosine-2'-O-)-methyltransferase TERM 4105 3144140 - 3144115 - g 74 -4.9 -4.7497 | gap 1, opp_overlap 3144119, overlap 3144119 GGCAGCCATGAAAAA TAACCTTGCTCA GGG TAAGCAA-GTTA TCGCTTATGGTGAAA recG 3143801 - 3145888 + | ATP-dependent DNA helicase TERM 4106 3145967 - 3145946 - T 100 -12.3 -5.46657 | opp_overlap 3145946 TACTGTAATAAAAAA CGGCACAGA CTTA CCTGTGCCG TTCTCATTCGAACTA TERM 4107 3145946 - 3145967 + T 90 -11.6 -3.51329 | opp_overlap 3145946 TACTGTAATAAAAAA CGGCACAG ACTTAC CTGTGCCG TTCTCATTCGAACTA gltS 3147211 - 3145997 - | sodium/glutamate symport carrier protein TERM 4108 3146586 - 3146596 + g 73 -8.2 -3.86524 | overlap 3146585 GAAGTGATCATTCTC CCCG TAG CGGG TTTCTCAAAGGCTGT TERM 4109 3148796 - 3148808 + G 76 -9.1 -3.68836 | overlap 3148794 CCGGTATTGCTGCAG GCGGT CTA ACCGC TATTATTTTAAACCT PMI2868 3147454 - 3148845 + | permease TERM 4110 3148858 - 3148913 + F 80 -6.4 -4.83169 | opp_overlap 3148868 3148872, overlap 3148860 3148868 3148872 TAATCATTAATAAAC TTCCAAATAATAAAGCGCTATTTT CATAATCA AAAATAGCGCTTTATTTGTTGGTC TTTTTATAAAAGCAT TERM 4111 3148860 - 3148911 + F 100 -13.4 -4.03995 | opp_overlap 3148868 3148872, overlap 3148858 3148868 3148872 ATCATTAATAAACTT CCAAATAATAAAGCGCTATTTT CATAATCA AAAATAGCGCTTTATTTGTTGG TCTTTTTATAAAAGC TERM 4112 3148903 - 3148868 - f 100 -13.6 -3.95071 | opp_overlap 3148860 3148858 3148868 3148872, overlap 3148872 TAAACTTCCAAATAA TAAAGCGCTATTTTCA TAAT CAAAAATAGCGCTTTA TTTGTTGGTCTTTTT TERM 4113 3148868 - 3148903 + F 100 -12.2 -4.40199 | opp_overlap 3148868 3148872, overlap 3148860 3148858 3148872 TAAACTTCCAAATAA TAAAGCGCTATTTT CATAATCA AAAATAGCGCTTTA TTTGTTGGTCTTTTT TERM 4114 3148899 - 3148872 - f 93 -10 -4.56978 | opp_overlap 3148868 3148860 3148858 3148872, overlap 3148868 CTTCCAAATAATAAA GCGCTATTTTCA TAAT CAAAAATAGCGC TTTATTTGTTGGTCT TERM 4115 3148872 - 3148899 + F 89 -8.6 -4.71791 | opp_overlap 3148872 3148868, overlap 3148868 3148860 3148858 CTTCCAAATAATAAA GCGCTATTTT CATAATCA AAAATAGCGC TTTATTTGTTGGTCT TERM 4116 3149477 - 3149444 - g 73 -7.7 -3.86037 | overlap 3149445 AGAAACATTAAAAGA GGTATTGAATAATTT AGAA AAATTATCCAATACA GAAAAAATGAGACTC TERM 4117 3149476 - 3149445 - g 80 -11.2 -2.89995 | overlap 3149444 GAAACATTAAAAGAG GTATTGAATAATTT AGAA AAATTATCCAATAC AGAAAAAATGAGACT PMI2869 3148986 - 3149525 + | hypothetical protein PMI2870 3149620 - 3151308 + | hypothetical protein PMI2871 3151392 - 3151631 + | plasmid-related protein rluF 3152597 - 3151719 - | ribosomal large subunit pseudouridine synthase F TERM 4118 3152268 - 3152258 - G 89 -5.4 -5.47218 | GGTTAGTCAAAAAAA TCAG TCC CTGA GAATCTTTATCTAAA PMI2873 3153687 - 3152773 - | acetyltransferase dtd 3154148 - 3153711 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 4119 3154218 - 3154191 - R 90 -5.7 -5.60993 | opp_overlap 3154191, overlap 3154210 GTGTTTATAAAAAAA GGATAACAAAT TCAATT AATTGTTATCC TATTACAACGTTATT PMI2875 3154846 - 3154229 - | hydrolase PMI2876 3155496 - 3155188 - | plasmid-related protein TERM 4120 3155612 - 3155599 - R 80 -5.3 -5.17744 | opp_overlap 3155599 ATACAGCAATAAAAA CAACT TTCA AGTTG TATATAAGACAAGAA PMI2877 3156226 - 3155825 - | hypothetical protein PMI2878 3156542 - 3156219 - | hypothetical protein TERM 4121 3156699 - 3156727 + r 87 -11.9 -2.53271 | opp_overlap 3156705, overlap 3156705 AGACCGTATTATGTT AAAAAAGCCAGTA AAT TACTGGCTTTTTA GTGTTATAAAAATAA TERM 4122 3156721 - 3156705 - R 100 -10.9 -5.06451 | opp_overlap 3156699 3156705 TATTATGTTAAAAAA GCCAGTA AAT TACTGGC TTTTTAGTGTTATAA TERM 4123 3156705 - 3156721 + r 100 -10.9 -4.90906 | opp_overlap 3156705, overlap 3156699 TATTATGTTAAAAAA GCCAGTA AAT TACTGGC TTTTTAGTGTTATAA vagD 3157186 - 3156767 - | plasmid-related protein TERM 4124 3156805 - 3156822 + g 70 -7.7 -3.69841 | overlap 3156803 TTTTTAGTCCTTCAA CTCGTGA AAAT TCACGGG TATTATTTGTTACCA TERM 4125 3157021 - 3156990 - G 75 -8.1 -4.03413 | opp_overlap 3156990 ACGCGTTCACAGAAA GCATCAACCAAAC GATTGT GTTTAGGTGATGC TTTTTTTCCTATTGC TERM 4126 3156990 - 3157021 + g 100 -6.6 -5.63374 | opp_overlap 3156990 ACGCGTTCACAGAAA GCATCAACCAAACG ATTG TGTTTAGGTGATGC TTTTTTTCCTATTGC vagC 3157416 - 3157183 - | plasmid-related protein TERM 4127 3157940 - 3157962 + r 74 -9.2 -3.15231 | GATCGGTTATTGTGC CTTAGCTCGT GCA ACTAGCTAAG TTGGGTACTTCTGGT TERM 4128 3158142 - 3158118 - R 100 -13.6 -3.85817 | opp_overlap 3158117 3158116 3158112 ACGGGGTTTTATAAA CTCAGGGCGC TTAAC GCGCCCTAAG AATTATATTATCAGA typA 3159983 - 3158166 - | GTP-binding protein TERM 4129 3159557 - 3159543 - G 71 -6.4 -4.25681 | overlap 3159545 3159552 3159554 ACCTAAGTTAACAAA CAGATC AAA GACCTG ATCAACAACCCAATC TERM 4130 3159656 - 3159636 - G 73 -8.3 -3.737 | opp_overlap 3159635 TAAGTTGTTAGCAAA CGCTTTTTG TGT CACAAAGCG AGTTTGTGGCATTGG TERM 4131 3160030 - 3160013 - H 71 -7 -4.07877 | opp_overlap 3160013 GCATTGTAGAAATAA GCGTGT TATTGT ACACGC TTTAGACGAGAGACT glnA 3160361 - 3161770 + | glutamine synthetase TERM 4132 3161775 - 3161763 - f 73 -9.1 -2.84732 | opp_overlap 3161761, overlap 3161758 TTGAAATGTATTACA GTGCG TAA CGCAC AATAGTTAAAGTACT TERM 4133 3161831 - 3161848 + F 95 -11.3 -3.92276 | overlap 3161829 CCGTGAAGCTATTTT GCCCATC TTCG GATGGGC TCTTTTCTCTCTAAT TERM 4134 3162390 - 3162378 - g 88 -7.7 -5.02715 | ACATGAAATTAAAAA TCCAC TCG GTGGA TTACGAGGGGCGGCT ntrB 3161950 - 3162996 + | nitrogen regulation protein NR(II) (two-component system sensor kinase) glnG 3163007 - 3164428 + | nitrogen regulation protein NR(I) (two-component system response regulator) hemN 3165831 - 3164458 - | oxygen-independent coproporphyrinogen III oxidase TERM 4135 3166630 - 3166662 + r 91 -10.7 -4.08945 | opp_overlap 3166605 3166632, overlap 3166632 TAATAGATAAATAAA AACGCGGCTTATATT TAC AATATAAACCGCGTC TTTTAAAAGAGTAAT TERM 4136 3166632 - 3166660 + r 100 -13.3 -3.6422 | opp_overlap 3166632, overlap 3166630 ATAGATAAATAAAAA CGCGGCTTATATT TAC AATATAAACCGCG TCTTTTAAAAGAGTA TERM 4137 3166660 - 3166632 - R 100 -15.5 -5.4433 | opp_overlap 3166632 3166630 ATAGATAAATAAAAA CGCGGCTTATATT TAC AATATAAACCGCG TCTTTTAAAAGAGTA PMI2886 3167349 - 3166693 - | lipoprotein PMI2887 3167696 - 3167346 - | lipoprotein PMI2888 3168401 - 3167721 - | lipoprotein TERM 4138 3168800 - 3168828 + r 100 -13.4 -3.39717 | opp_overlap 3168800 TGAATAGTTATGAAA CGTGAAGTAATA CAATT TATTACTTCACG TTAATATTGATGGCT TERM 4139 3168828 - 3168800 - R 100 -13.4 -3.7948 | opp_overlap 3168800 TGAATAGTTATGAAA CGTGAAGTAATA CAATT TATTACTTCACG TTAATATTGATGGCT tex 3171189 - 3168856 - | transcription accessory protein TERM 4140 3170098 - 3170071 - G 78 -10.6 -3.08073 | opp_overlap 3170075 3170090, overlap 3170074 3170075 ATTATGCTTAATACA TAATGCCGCTAC ACTA GCAGCGGCTTTA TCCGCTTGTCCGGTA TERM 4141 3170095 - 3170074 - G 70 -7.9 -3.68292 | opp_overlap 3170075 3170090, overlap 3170071 3170075 ATGCTTAATACATAA TGCCGCTAC ACTA GCAGCGGCT TTATCCGCTTGTCCG TERM 4142 3170094 - 3170075 - G 80 -11.4 -2.80493 | opp_overlap 3170075 3170090, overlap 3170074 3170071 TGCTTAATACATAAT GCCGCTAC ACTA GCAGCGGC TTTATCCGCTTGTCC TERM 4143 3170075 - 3170094 + g 79 -9.2 -3.9398 | opp_overlap 3170075 3170074 3170071, overlap 3170090 TGCTTAATACATAAT GCCGCTAC ACTA GCAGCGGC TTTATCCGCTTGTCC TERM 4144 3170818 - 3170830 + g 77 -7.7 -4.28432 | opp_overlap 3170818 TAACAAATCAGCTAA TGGCT CTA AGCCA TTTTCAATTGCAATT greB 3171371 - 3171850 + | transcription elongation factor ompR 3171999 - 3172721 + | osmolarity transcriptional regulator (two-component system response regulator) TERM 4145 3172895 - 3172865 - g 89 -9.8 -4.26351 | CAGCAATTTAATAAA GTATTAGCGTATGA AAT TCGTACGCTAGTAC CGGAAGAACTGATCT envZ 3172721 - 3174061 + | osmolarity sensor protein (two-component system sensor kinase) pstS 3174264 - 3175304 + | phosphate ABC transporter, substrate-binding protein TERM 4146 3175338 - 3175362 + F 77 -10 -2.52543 | opp_overlap 3175331 AAAATAGATTAACGT TCACCCCCTG CAACA CAGGGGGTAA TAAATTAAAGAGGCT TERM 4147 3175574 - 3175560 - g 70 -7.8 -3.72576 | TTCTTGTGGACGAAA GAGTGG GAT CCACCC GCACAGGAATTCGGT pstC 3175380 - 3176339 + | phosphate ABC transporter, permease protein TERM 4148 3176420 - 3176407 - g 73 -8.1 -3.91858 | CATATACGCCATAAA CGCCA ACTT TGGCG TCGTCAAAAAAACCG pstA 3176341 - 3177243 + | phosphate ABC transporter, permease protein TERM 4149 3177326 - 3177308 - g 71 -3.9 -4.87133 | opp_overlap 3177308 3177313, overlap 3177310 ACGCTGGAAACAAAA TCCAAGT TCGTG ACTTGAA CTTCTACTATGGTAA pstB 3177274 - 3178050 + | phosphate ABC transporter, ATP-binding protein phoU 3178065 - 3178799 + | phosphate transport/metabolism protein TERM 4150 3178831 - 3178851 + F 100 -11.2 -6.04953 | opp_overlap 3178831, overlap 3178822 CTTTACGCTCTGAAA CAGAGGCA TTATT TGCCTCTG TTTTTTTATTTATGT TERM 4151 3178851 - 3178831 - f 87 -11.2 -3.54424 | opp_overlap 3178822 3178831 CTTTACGCTCTGAAA CAGAGGCA TTATT TGCCTCTG TTTTTTTATTTATGT PMI2898 3179003 - 3179842 + | amino acid ABC transporter, substrate-binding protein TERM 4152 3179920 - 3179892 - f 100 -13.2 -4.431 | gap 1, opp_overlap 3179898 GATTTATTGATAAAA CACCAA-CCCCGC TACT GCGGGGTTTGGCG TCTGCAATAGGTAAT TERM 4153 3179898 - 3179913 + F 95 -11.8 -3.63805 | opp_overlap 3179892 TTGATAAAACACCAA CCCCGC TACT GCGGGG TTTGGCGTCTGCAAT PMI2899 3179940 - 3180677 + | amino acid ABC transporter, permease protein TERM 4154 3181418 - 3181402 - g 82 -3.7 -5.45652 | overlap 3181403 3181404 ATCCCTAATAAAAAA CCTTCAC TGA GTGAAAA AATTATTTAACTTAT PMI2900 3180679 - 3181428 + | amino acid ABC transporter, permease protein TERM 4155 3181465 - 3181433 - T 71 -9.3 -2.56288 | opp_overlap 3181437, overlap 3181429 AAATTATTTAACTTA TTCATCCCCTAATAA TAT TGATTAGGGGATTAA ATAATAACCATCACA TERM 4156 3181437 - 3181461 + T 81 -10.1 -3.09635 | opp_overlap 3181433 3181429 TATTTAACTTATTCA TCCCCTAATAA TAT TGATTAGGGGA TTAAATAATAACCAT PMI2901 3182496 - 3181486 - | hypothetical protein TERM 4157 3182042 - 3182017 - G 74 -4.1 -5.05113 | GCTATATAAAGAAAA GTTATTCAAAT AATG AATTGAACAAC TGACATAAAACTTGA PMI2902 3183456 - 3182518 - | transacylase PMI2903 3184775 - 3183468 - | hypothetical protein TERM 4158 3183870 - 3183857 - G 74 -5.3 -4.68451 | overlap 3183866 AAAAATAATAATAAA TAGCA ATAA TGCTA TACAATAATAGCATT TERM 4159 3184149 - 3184159 + g 89 -5.4 -5.39221 | ACCACGTACATAAGT TGGT AAT ACCA TTTTTTCATTATTAT PMI2904 3185443 - 3184775 - | hypothetical protein PMI2905 3186131 - 3185424 - | hypothetical protein TERM 4160 3185641 - 3185663 + g 72 -9.2 -3.38951 | opp_overlap 3185639, overlap 3185642 TTTTTCACTAAAGCT CTGCTAAAGG CCA CCTTTAGCAA TTGATCTGTTGATAA TERM 4161 3185642 - 3185662 + g 83 -12.7 -2.62889 | opp_overlap 3185639, overlap 3185641 TTTTCACTAAAGCTC TGCTAAAGG CCA CCTTTAGCA ATTGATCTGTTGATA PMI2906 3187177 - 3186143 - | ATP-binding protein PMI2907 3188391 - 3187174 - | beta-ketoacyl-ACP synthase TERM 4162 3188274 - 3188291 + g 87 -8.5 -4.63179 | opp_overlap 3188273 3188271 CTACAAAATAATCAT CAGAGAA GTAT TTCTCTG TTTTAATTGTTCTTT PMI2908 3190949 - 3188388 - | beta-ketoacyl-ACP synthase TERM 4163 3189396 - 3189407 + g 72 -4.4 -4.69053 | opp_overlap 3189392 TAAGGCATAAGTCCC GCTA GGAA TAGC TTTTCTTGGATCATA TERM 4164 3189466 - 3189477 + g 70 -3 -5.02074 | overlap 3189460 TCAGTGATAGCATGA TAAC AGGC GTTA TTTTTTAAGCGATGA PMI2909 3192161 - 3191013 - | aminomethyltransferase PMI2910 3192512 - 3192192 - | acyl carrier protein PMI2911 3193103 - 3192525 - | fatty acyl chain dehydratase PMI2912 3193871 - 3193116 - | 3-oxoacyl-[acyl-carrier protein] reductase PMI2913 3194261 - 3193893 - | holo-[acyl-carrier protein] synthase PMI2914 3196852 - 3194336 - | haemagglutinin TERM 4165 3197403 - 3197414 + G 73 -5.8 -4.60889 | ACAGAACTGATCGCC GGTG TCAC CACC TTTTTAACCATGGTT PMI2915 3197310 - 3198662 + | permease TERM 4166 3198697 - 3198722 + T 79 -4.7 -5.29716 | opp_overlap 3198697 TTAATAATAAAAAAA GCACCAATAAT ATTC ATCACTGGTGC TTTTTATTATCTTAA TERM 4167 3198722 - 3198697 - T 100 -9.1 -5.95946 | opp_overlap 3198697 TTAATAATAAAAAAA GCACCAATAAT ATTC ATCACTGGTGC TTTTTATTATCTTAA PMI2916 3199287 - 3198739 - | acetyltransferase TERM 4168 3198948 - 3198938 - G 79 -5.4 -4.85618 | AAATAATCAATAAAA GCAA TCA TTGC CTCATACATCAACCC PMI2917 3200764 - 3199289 - | hypothetical protein TERM 4169 3200453 - 3200430 - G 71 -7.4 -3.89215 | opp_overlap 3200428 CCTGATAAATTTAAA CCTAACATGG CAAA CCAAGCTAGG TGATAATTTTTGGTT TERM 4170 3200608 - 3200586 - G 77 -4.8 -4.84311 | GGCCACATAATAAAA CCAACAAACC AAG GGTTTTTAGG TGAGCCCCAACCGCC PMI2918 3200954 - 3201454 + | hypothetical protein TERM 4171 3201478 - 3201511 + F 80 -7.7 -4.19648 | gap 1, opp_overlap 3201485, overlap 3201481 TACCCTATCTTAATC TGA-CAGATACCAA ATATATA TTGGTATCTGTTCA TTTCCTTTCTCTCTA TERM 4172 3201481 - 3201507 + F 82 -9.6 -3.67121 | opp_overlap 3201485, overlap 3201478 CCTATCTTAATCTGA CAGATACCAA ATATATA TTGGTATCTG TTCATTTCCTTTCTC TERM 4173 3201537 - 3201555 + F 100 -7.6 -5.67283 | opp_overlap 3201536, overlap 3201517 CTCTATTTTAGAGAG TCATAATT AGA AATTATGA TTTTTTATTTAAATT TERM 4174 3202392 - 3202372 - g 80 -10.5 -3.77553 | opp_overlap 3202386, overlap 3202373 TAACAGTATTAACAA CCGCCAAAT TGA ATTTGGCGA GCCGATGCTTTGTGG TERM 4175 3202391 - 3202373 - g 81 -11.8 -2.85809 | opp_overlap 3202386, overlap 3202372 AACAGTATTAACAAC CGCCAAAT TGA ATTTGGCG AGCCGATGCTTTGTG PMI2919 3201668 - 3203116 + | hypothetical protein TERM 4176 3203149 - 3203184 + F 77 -9.1 -3.1886 | CACTATTCTCTGCAA CGGGATCTGTCAGTA TGACCT TGATGATAGATCCCG TTAATAGCATTCACT TERM 4177 3203230 - 3203246 + F 79 -5.1 -5.1675 | GATGCGCAATTATCT CTAACTG TTA CAGTTTG TTTTTTGATGAATAA TERM 4178 3203727 - 3203698 - g 81 -5.7 -5.00884 | overlap 3203726 ATTTTGCGTAAAAAA GATCTCGCTTTGA TAAA TCTTAGCGAAATC GCTCATAACGAAAAA feoA 3203509 - 3203745 + | ferrous iron transport protein A TERM 4179 3206089 - 3206078 - g 70 -5.8 -4.34223 | AATTTAAGTAACAAA CGCT CATT AGCG AAACAGTGCTGTGGT feoB 3203795 - 3206125 + | ferrous iron transport protein B PMI2922 3206146 - 3206379 + | hypothetical protein TERM 4180 3206414 - 3206435 + F 93 -8.7 -4.93296 | ACATACCTTCCATAT CCCCCTG CTATCTCA CAGGGGG TTTTTCTGATAATCA PMI2923 3206597 - 3207043 + | hypothetical protein bioH 3207854 - 3207069 - | carboxylesterase (biotin synthesis protein) TERM 4181 3208452 - 3208479 + G 72 -9.2 -3.29381 | GTAAATCGCACAGTG TCAGTGGCAGGT AAGG ATCTGGCACTGA TTGATGATGTTATCA gntX 3207894 - 3208586 + | gluconate metabolism protein gntY 3208647 - 3209225 + | gluconate metabolism protein (iron-sulphur cluster biosynthesis) glpE 3209406 - 3209732 + | thiosulfate sulfurtransferase (gluconate metabolism protein) glpG 3209751 - 3210590 + | hypothetical protein glpR 3210629 - 3211387 + | glycerol-3-phosphate regulon repressor TERM 4182 3211407 - 3211422 + F 74 -5.4 -4.75404 | opp_overlap 3211407 ACCCTCTATTAAAAA GTACCT TTCG GGGTAC TTTTTCCTAAAATTT TERM 4183 3211864 - 3211901 + G 75 -5.7 -4.75309 | gap 1, opp_overlap 3211865, overlap 3211865 TTTAGAGCATTACGA ATTC-CGTTTAGTCAGTG AAG CATTGGCTGAACGTGAAG TTTTATTGCGTTTGG TERM 4184 3211865 - 3211900 + G 72 -9.2 -3.44101 | gap 1, opp_overlap 3211865, overlap 3211864 TTAGAGCATTACGAA TTC-CGTTTAGTCAGTG AAG CATTGGCTGAACGTGAA GTTTTATTGCGTTTG glpD 3211685 - 3213178 + | aerobic glycerol-3-phosphate dehydrogenase TERM 4185 3213229 - 3213249 + T 100 -11.1 -5.7946 | TTATTAGCAATTTTT GTGGCGCGA TAA TAGCGCCAC TTTTTTTATTGCCGC PMI2931 3213668 - 3213312 - | hypothetical protein metF 3213956 - 3214855 + | 5,10-methylenetetrahydrofolate reductase TERM 4186 3214864 - 3214888 + T 100 -14.3 -4.82901 | GGTTTAGTCTTATCA CCCCGCCCATA GTC TATTGGCGGGG TTTTTCTAGGCGAGA PMI2933 3215494 - 3214904 - | hypothetical protein TERM 4187 3216032 - 3216018 - R 85 -2.9 -6.06723 | opp_overlap 3216001 CTTTTTAAAAAAAAA GAAAA TATTT TTTTC ATACATAGCCTACAT TERM 4188 3216174 - 3216142 - R 70 -6.3 -4.20368 | TGAGGCGAATAGAAA GCTTATTCTACTCAC AAA GTGAGGCGAATAATC ACGATATTTGACTCA PMI2934 3217191 - 3216187 - | LacI-family transcriptional regulator TERM 4189 3216510 - 3216526 + g 73 -8.7 -3.76568 | GCTTCATCATCTGTT CACCATC TTT GGTGGTG TTATGTTCTGCATAG PMI2935 3218766 - 3217252 - | hypothetical protein TERM 4190 3217534 - 3217524 - G 79 -5.4 -4.93296 | CCATCATCACAAAAA CATC AAT GATG CTATGGTTAACTGAA PMI2936 3219247 - 3218786 - | hypothetical protein TERM 4191 3219261 - 3219289 + r 100 -13.2 -4.30719 | overlap 3219264 ATGTCGGGATCTCCC CGACCCTATCCG ACTTG CGGATAGGGTGG TTTATTATAGAAAGG TERM 4192 3219264 - 3219286 + r 100 -13.5 -3.15008 | overlap 3219261 TCGGGATCTCCCCGA CCCTATCCG ACTTG CGGATAGGG TGGTTTATTATAGAA PMI2937 3220297 - 3219305 - | hypothetical protein TERM 4193 3219893 - 3219876 - G 70 -8.5 -3.31322 | TCCAATGTTTTATAA GGTGAAT TAGC ATTCACC ACGAGCACAACCGGA PMI2938 3221352 - 3220300 - | hypothetical protein TERM 4194 3221122 - 3221112 - G 73 -6.8 -4.28254 | opp_overlap 3221118, overlap 3221076 GGTCAACATGTAAAA CTGG ATT CCAG TGCGCAACACCTGGA TERM 4195 3221194 - 3221214 + g 70 -9.7 -2.70946 | opp_overlap 3221194 3221196 3221198, overlap 3221193 TTTTATCGCCAACCA GATAGCGGT ATT ACCGCTACC CTCTTTATCGCCAGC TERM 4196 3221214 - 3221194 - G 81 -11.9 -2.72344 | opp_overlap 3221194 3221193, overlap 3221196 3221198 TTTTATCGCCAACCA GATAGCGGT ATT ACCGCTACC CTCTTTATCGCCAGC TERM 4197 3221212 - 3221196 - G 77 -10.9 -2.90723 | opp_overlap 3221194 3221193, overlap 3221194 3221198 TTATCGCCAACCAGA TAGCGGT ATT ACCGCTA CCCTCTTTATCGCCA TERM 4198 3221251 - 3221237 - G 82 -4.2 -5.52384 | TCGCCAGCAAAAAAA GCGGTT AAT AAACGC TCAGAGTTAGGCACA PMI2939 3222304 - 3221375 - | dihydrodipicolinate synthase-family protein PMI2940 3223898 - 3222315 - | hypothetical protein PMI2941 3225598 - 3224012 - | probable carbohydrate kinase PMI2942 3226034 - 3226462 + | hypothetical protein TERM 4199 3226478 - 3226509 + T 71 -8.2 -3.37344 | opp_overlap 3226478 3226475, overlap 3226489 ATAGAGTAAATACAG CAAGCAATGATG CGATAATA CATTATTGCTTG TTGATTAAATAACAG PMI2943 3227266 - 3226514 - | ABC transporter, ATP-binding protein TERM 4200 3226817 - 3226799 - G 77 -9.6 -3.56161 | overlap 3226781 TAACGCACGACATAA GCAAACTC GTT GAGCTTGC CCACCAGACAATTCA PMI2944 3228112 - 3227303 - | ABC transporter, ATP-binding protein PMI2945 3228959 - 3228090 - | ABC transporter, permease protein PMI2946 3229888 - 3228962 - | ABC-transporter, permease protein TERM 4201 3229714 - 3229701 - G 72 -3.1 -5.0133 | TAGCGTGTGAAAAAA GGCTT ATCT AAACC AAGCTCACGGCGCAT TERM 4202 3229924 - 3229902 - R 100 -12.8 -3.33815 | opp_overlap 3229904 ATCTGCTTTAACCAA TATGGCACCG GAT CAGTGCCATA TTGAAGTAACCTCTT TERM 4203 3229904 - 3229922 + r 72 -8.8 -3.06162 | opp_overlap 3229902 CTGCTTTAACCAATA TGGCACCG GAT CAGTGCCA TATTGAAGTAACCTC PMI2947 3231528 - 3229951 - | ABC transporter. substrate-binding protein TERM 4204 3231285 - 3231271 - G 70 -2.8 -5.06414 | TTGGCGCAAGAAAAA GGTATA ACT TTTACC ATCAGGAGAAATTTC PMI2948 3232329 - 3231550 - | probable methyltransferase PMI2949 3232764 - 3233459 + | hypothetical protein TERM 4205 3233519 - 3233478 - f 82 -6.4 -4.9448 | opp_overlap 3233485, overlap 3233485 AGGTATTAAATAAAA TAAA-AAATAGCGTTTTATA TTGA TATAAA-CGCTATTTATTTA TAAAAACAAACACGC TERM 4206 3233511 - 3233485 - f 100 -6.1 -5.95449 | gap 1, opp_overlap 3233485, overlap 3233478 AAATAAAATAAAAAA TAGCGTTTTATA TTGA TATAAA-CGCTA TTTATTTATAAAAAC TERM 4207 3233485 - 3233511 + F 76 -6.1 -4.55295 | gap 1, opp_overlap 3233485 3233478 AAATAAAATAAAAAA TAGCGTTTTATA TTGA TATAAA-CGCTA TTTATTTATAAAAAC PMI2950 3233661 - 3234227 + | outer membrane protein TERM 4208 3234282 - 3234256 - T 100 -14.6 -5.75599 | opp_overlap 3234254 TAAATTATAAAAAAA GCCTCTGTCATT ATC AATAACAGAGGC AAATTATTTCACAGA chbG 3235097 - 3234336 - | hypothetical protein chbF 3236487 - 3235135 - | 6-phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) chbR 3237499 - 3236648 - | cel operon repressor chbA 3237852 - 3237505 - | N,N'-diacetylchitobiose-specific PTS system, EIIA component chbC 3239272 - 3237914 - | N,N'-diacetylchitobiose-specific PTS system , EIIC component chbB 3239688 - 3239362 - | N,N'-diacetylchitobiose-specific PTS system , EIIB component PMI2957 3240142 - 3241101 + | iron ABC transporter, substrate-binding protein TERM 4209 3241178 - 3241207 + G 75 -5.6 -4.77036 | overlap 3241183 TGATCAGTCTATTTA TCGGCGCAGGAG ATATCA CTCCTGCTTCGC TTTTTACTGATCCCG TERM 4210 3241183 - 3241202 + G 74 -9.3 -3.47218 | overlap 3241178 AGTCTATTTATCGGC GCAGGAG ATATCA CTCCTGC TTCGCTTTTTACTGA PMI2958 3241111 - 3242073 + | iron ABC transporter, permease component PMI2959 3242060 - 3243067 + | iron ABC transporter permease component TERM 4211 3243426 - 3243411 - g 77 -6.2 -4.49353 | opp_overlap 3243411 CTAGAAGATAAGAAA GTGATT GATG AATCAC TCGATTTTCTTAATT PMI2960 3243069 - 3243824 + | iron ABC transporter, ATP-binding protein TERM 4212 3243885 - 3243845 - T 86 -11.5 -2.79327 | opp_overlap 3243850, overlap 3243828 3243850 CTATTTCACCGAAAG CCAAACAGCATATTGTT ACTTTTA AACAATATGCTGTTTAA TTACTTCGTAGTCAC TERM 4213 3243880 - 3243850 - T 95 -11.4 -3.85909 | opp_overlap 3243850, overlap 3243828 3243845 TCACCGAAAGCCAAA CAGCATATTGTT ACTTTTA AACAATATGCTG TTTAATTACTTCGTA TERM 4214 3243850 - 3243880 + T 100 -11.4 -4.01419 | opp_overlap 3243828 3243845 3243850 TCACCGAAAGCCAAA CAGCATATTGTT ACTTTTA AACAATATGCTG TTTAATTACTTCGTA PMI2961 3244437 - 3243886 - | TetR-family transcriptional regulator PMI2962 3244529 - 3246028 + | multidrug efflux protein (MFS-family transporter) TERM 4215 3246062 - 3246046 - T 100 -10.8 -4.55118 | opp_overlap 3246046 CAAGCTCATAGAAAA CGCGCC GTTAT GGCGCG TTTCTCACAAAATCA TERM 4216 3246046 - 3246062 + T 95 -11.5 -3.86346 | opp_overlap 3246046 CAAGCTCATAGAAAA CGCGCCG TTA TGGCGCG TTTCTCACAAAATCA PMI2963 3246823 - 3246053 - | probable transcriptional regulator TERM 4217 3247033 - 3247045 + H 74 -7.7 -3.9122 | opp_overlap 3247022 TAATCCTCTACTATC CCTCT TGC AGAGG TTGTTTCAGGCGCTC TERM 4218 3248572 - 3248558 - g 70 -2.8 -5.0916 | overlap 3248560 GTGTGAAGATAAAAA TTTGGT CAC ACCACA AAATGGCTTACTCAA PMI2964 3247200 - 3249617 + | anaerobic reductase component A PMI2965 3249614 - 3250255 + | anaerobic reductase component B TERM 4219 3250683 - 3250698 + G 72 -3.2 -5.0133 | opp_overlap 3250683 AACATGGATGGATAA CAACAC TTAT GTGATG TTTTTTGGCGCGATG PMI2966 3250252 - 3251151 + | anaerobic reductase component C TERM 4220 3251186 - 3251208 + T 84 -6.3 -5.24531 | opp_overlap 3251186, overlap 3251206 TGAAGATGACAATTA TCAGGGG AATTATTAG CCCCTGA TTTTTTATCAAAGAT PMI2967 3253424 - 3251223 - | LacI-family transcriptional regulator TERM 4221 3251254 - 3251275 + g 71 -5.3 -4.49353 | gap 1, opp_overlap 3251246 3251254 3251252, overlap 3251246 3251256 GTATCAATCAACAGA CG-TTGATTA ATA TAATCAATCG TTTCTTCTATTGTCA TERM 4222 3252002 - 3252019 + g 75 -2.7 -5.1861 | CAAAGGTTGTCGGCA CAGTTAA TTCA TTACCTG TTTTTTCGTAATACA TERM 4223 3253155 - 3253142 - G 76 -2.4 -5.41143 | overlap 3253127 GATCTGTTAAAAAAA GATC GTAGCT GATC TCTGGAAAATTAACG PMI2968 3253769 - 3254590 + | hypothetical protein PMI2969 3254604 - 3255851 + | MFS-family transporter TERM 4224 3255958 - 3255980 + G 73 -8.4 -3.73068 | TATTGCTAAATTACT GGCCGCCT TTATCTT AGGCGGTC TTATTGGCTTAGAGC PMI2970 3255890 - 3256603 + | hypothetical protein TERM 4225 3256667 - 3256635 - T 72 -8.6 -3.09925 | gap 1, opp_overlap 3256635, overlap 3256633 3256632 ATAGAGAAACAACCA TAGTGCC-CCTATAT TCTT AAATAGGTGGCACTA TTATAATCTAAGTAA TERM 4226 3256635 - 3256667 + T 76 -8.6 -3.47573 | gap 1, opp_overlap 3256635 3256633 3256632 ATAGAGAAACAACCA TAGTGCC-CCTATAT TCTT AAATAGGTGGCACTA TTATAATCTAAGTAA PMI2971 3258673 - 3256694 - | surface polysaccharide modification acyltransferase TERM 4227 3257901 - 3257887 - G 73 -7.2 -4.06419 | GTCCTGTATAAATAA TTAGTG CAA CACTAA GACAAACATATAACG PMI2972 3259481 - 3258792 - | hypothetical protein TERM 4228 3259296 - 3259276 - G 76 -6.9 -4.38712 | opp_overlap 3259281 GTCACCGCTATAAAA GGAAATTGC TGA GCAATTTGC TGACAATAAACATCT TERM 4229 3259588 - 3259567 - R 100 -10.9 -5.60689 | overlap 3259585 GTAGATAATAAAAAA GTGGCTCTC AAGC GAAAGCCAC TGTCACATCCAATGG PMI2973 3260553 - 3259660 - | N-acetylneuraminate lyase PMI2974 3261614 - 3260727 - | RpiR-family transcriptional regulator TERM 4230 3261707 - 3261695 - R 77 -4.1 -5.46629 | opp_overlap 3261698 AACAGGTTAAAAAAA GCCTT GTT AAGAC AATAATGTGATAATA PMI2975 3262278 - 3261805 - | hypothetical protein PMI2976 3263782 - 3262292 - | sodium:solute symporter nanK 3264703 - 3263834 - | N-acetylmannosamine kinase TERM 4231 3264347 - 3264329 - G 73 -6.8 -4.19678 | TGAGACCGTAATAAA CACCATAT CAG ATATAGTG TCACGACGATGATAA nanE 3265398 - 3264700 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4232 3265547 - 3265574 + r 70 -4.1 -4.96657 | opp_overlap 3265551, overlap 3265551 TAAATAAACAGAATA AAAATGGAGGC CAAATA GCCTCCATTGA TTTTGTTATATTTCT TERM 4233 3265570 - 3265551 - R 100 -10 -5.33331 | opp_overlap 3265551 3265547 TAAACAGAATAAAAA TGGAGGCC AAAT AGCCTCCA TTGATTTTGTTATAT TERM 4234 3265551 - 3265570 + r 81 -9.3 -3.86445 | opp_overlap 3265551, overlap 3265547 TAAACAGAATAAAAA TGGAGGC CAAATA GCCTCCA TTGATTTTGTTATAT fdhF 3267772 - 3265604 - | formate dehydrogenase H TERM 4235 3268169 - 3268183 + H 100 -7.1 -5.61596 | opp_overlap 3268169 3268168 CATTTTTTGCTAAAG CCACC AGTAA GGTGG TTTTTTTATAACCCT TERM 4236 3268715 - 3268730 + G 70 -5.4 -4.42386 | gap 1, opp_overlap 3268715 ATAGTAGTGAATTAA CGGG-GA TCT TCACCCG TTTTATCAGTGACCC PMI2980 3268333 - 3269649 + | sodium:solute symporter TERM 4237 3269685 - 3269660 - T 100 -14.9 -5.75538 | opp_overlap 3269664 GTTAAAAAACAAAAA GAGAGCTTCTT ATTT AAGAAGCTCTC TGACTAATTATCCCC TERM 4238 3269664 - 3269681 + T 71 -8.5 -2.93703 | opp_overlap 3269660 AAAAACAAAAAGAGA GCTTCTT ATTT AAGAAGC TCTCTGACTAATTAT PMI2981 3271109 - 3269739 - | lyase TERM 4239 3270664 - 3270685 + g 78 -3.7 -5.24531 | CGGCCATGTGTTCTA CCGGGCATA ACCA TATGTTTGG TTTTTTCTGCCAAGT PMI2982 3272679 - 3271123 - | PTS system, EIIBC component TERM 4240 3272778 - 3272802 + r 82 -9.4 -3.7398 | opp_overlap 3272777, overlap 3272776 AGTTTTAAATATTAT CTTAGGTCAT TTATT ATGACCTAGG TCTTTTAAATTAAAA PMI2983 3273771 - 3273031 - | phosphosugar isomerase/binding protein TERM 4241 3273524 - 3273535 + g 74 -4.4 -4.98103 | opp_overlap 3273524 TGTTTTTTATAAGAT GAGT GATC ACTC TTTTCTATTTTATTA PMI2984 3274385 - 3273903 - | cold-shock protein TERM 4242 3274457 - 3274434 - H 79 -8.2 -3.97947 | opp_overlap 3274434 TCTATGCAGTATAAA GCACAATCTG CATT CAGACTATGC CTTTGCCTATTAGTC TERM 4243 3275115 - 3275131 + G 78 -10.9 -3.07876 | opp_overlap 3275110, overlap 3275110 3275112 3275117 TGCCAATATATAGGG CACCCTA TTT TAGGGTG TGATTTGTATGGTGG rluA 3274566 - 3275264 + | ribosomal large subunit pseudouridine synthase PMI2986 3275796 - 3275284 - | hypothetical protein TERM 4244 3276095 - 3276085 - g 77 -8.2 -4.21402 | ATGCAAAACTAGAAA GCGG TTA CCGC GAAAAGGCGCTAAAA TERM 4245 3276221 - 3276239 + G 75 -10.4 -3.13593 | overlap 3276219 3276216 3276214 TAATCCCGAAGATGG CAGTAACT GGG AGTTACTG TGTCTGTATTGTCAT PMI2987 3276048 - 3276395 + | HNH endonuclease PMI2988 3277611 - 3276463 - | transposase TERM 4246 3277038 - 3277051 + g 75 -8.1 -4.06502 | TCCGTTGAAGCCTTG CCAGC TTTC GCTGG TTTACTTTAAAACTG PMI2989 3277694 - 3278110 + | transposase TERM 4247 3278121 - 3278162 + F 87 -10.7 -3.6682 | opp_overlap 3278121 3278120, overlap 3278132 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAAATCAGA TERM 4248 3278132 - 3278151 + F 95 -10.6 -4.18094 | opp_overlap 3278121 3278120, overlap 3278121 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG PMI2990 3278930 - 3279448 + | hypothetical protein TERM 4249 3279455 - 3279486 + F 85 -8 -4.37502 | opp_overlap 3279462, overlap 3279456 3279462 GAAGCATAAGTCATG GGTTAAACGAGTCC TTAG GGGCTCGTTTACCG TTTTAGTCTCCTACT TERM 4250 3279456 - 3279485 + F 88 -11.5 -3.21778 | opp_overlap 3279462, overlap 3279455 3279462 AAGCATAAGTCATGG GTTAAACGAGTCC TTAG GGGCTCGTTTACC GTTTTAGTCTCCTAC TERM 4251 3279462 - 3279479 + F 81 -9.1 -3.77484 | opp_overlap 3279462, overlap 3279456 3279455 AAGTCATGGGTTAAA CGAGTCC TTAG GGGCTCG TTTACCGTTTTAGTC TERM 4252 3281200 - 3281187 - g 84 -6.7 -4.84492 | TTAATCATAATAAAA CCCAA TACG TTGGG CATGATGATAGCCAT PMI2991 3279686 - 3281692 + | VgrG-like protein TERM 4253 3282716 - 3282728 + G 72 -3.3 -5.02476 | overlap 3282715 GCTACTGTATACACG CAGCA AAT TGCAG TTTTTTAGACGATAT PMI2992 3281692 - 3282915 + | hypothetical protein TERM 4254 3283582 - 3283570 - g 83 -4.9 -5.1848 | AATTAATGCAAAAAA TCAAT TTT ATTGA TTACAACAATAACGA TERM 4255 3284060 - 3284070 + G 85 -2.6 -5.75342 | GTGGAAAAATATTCA TAAA ACA TTTA TTTTTTTTGAGAAAC PMI2993 3282912 - 3286013 + | hypothetical protein PMI2994 3286013 - 3286951 + | hypothetical protein TERM 4256 3287007 - 3286997 - g 70 -5.4 -4.43624 | opp_overlap 3287001, overlap 3287000 AAATGATACAACAAA TACC GGC GGTA CCGTACTTACCGGCT PMI2995 3286944 - 3287213 + | hypothetical protein PMI2996 3287393 - 3288328 + | hypothetical protein PMI2997 3289095 - 3288418 - | fimbrial protein PMI2998 3290795 - 3289188 - | fimbrial protein TERM 4257 3290715 - 3290699 - G 74 -3.7 -5.07486 | opp_overlap 3290713, overlap 3290700 TATTCTCAATAAAAA CGTAACT ATT AGTTACC GTAGCGGCTTGACTG TERM 4258 3292404 - 3292374 - R 70 -8.4 -3.14683 | opp_overlap 3292373 3292375 3292382, overlap 3292382 ACATGCTGGTATCAA CTTCAAAATTACCC ATC GGGAAATTTTGAAT ATTTAATAATTTACC TERM 4259 3292375 - 3292403 + r 91 -11.9 -3.52909 | opp_overlap 3292374 3292382, overlap 3292373 3292382 CATGCTGGTATCAAC TTCAAAATTACCC ATC GGGAAATTTTGAA TATTTAATAATTTAC PMI3001 3294009 - 3293326 - | fimbrial protein TERM 4260 3294074 - 3294033 - R 74 -5.4 -4.85782 | opp_overlap 3294036, overlap 3294036 GTTTCTAAAAATAAA TAACGATAAAGATATTAC TTCCCT ATAGTATCTTTATCGTAA TATCAATTAGCCAAT TERM 4261 3294071 - 3294036 - R 79 -7.1 -4.52502 | opp_overlap 3294036, overlap 3294033 TCTAAAAATAAATAA CGATAAAGATATTAC TTCCCT ATAGTATCTTTATCG TAATATCAATTAGCC PMI3002 3294722 - 3294099 - | fimbrial protein TERM 4262 3294690 - 3294706 + g 100 -9.5 -5.95539 | overlap 3294683 AGCAATAATTGTTGA TAGCATC ACC GATGCTA TTTTTTTATTTAACA TERM 4263 3294847 - 3294871 + r 71 -6.7 -3.99917 | opp_overlap 3294851, overlap 3294846 3294850 TTTTATGTGATTTAT TAATTTTTAAT GTA ATTAAAAGTTA TTTATGAAGTTTTTT PMI3003 3295182 - 3294862 - | fimbrial operon regulator TERM 4264 3296113 - 3296093 - R 90 -9.1 -4.62085 | overlap 3296090 AGTGTTAAAAAATAA GCTTAGTCT TTA AGACTAAAC GTCAGCCGAGGTTTT PMI3004 3297264 - 3296230 - | hypothetical protein TERM 4265 3297032 - 3297061 + g 93 -12.3 -4.09739 | gap 1, opp_overlap 3297036 3297039 CGATTTCCCTCTAAT CG-AACTATCCGGA ATT TCCGGATGGTTGCG TTTTGAGCAAGTTCC TERM 4266 3297056 - 3297036 - G 73 -9.7 -3.17075 | opp_overlap 3297032, overlap 3297039 TTCCCTCTAATCGAA CTATCCGGA ATT TCCGGATGG TTGCGTTTTGAGCAA TERM 4267 3297053 - 3297039 - G 73 -10 -2.78712 | opp_overlap 3297032, overlap 3297036 CCTCTAATCGAACTA TCCGGA ATT TCCGGA TGGTTGCGTTTTGAG prlC 3297985 - 3300027 + | oligopeptidase A TERM 4268 3300058 - 3300075 + G 90 -12.7 -3.6471 | opp_overlap 3300058 TTACTTTGTGAAGAA GGCGCTG ATAA CAGCGCC TTATCTGCTTTAGCG TERM 4269 3300075 - 3300058 - g 90 -12.7 -3.62046 | opp_overlap 3300058 TTACTTTGTGAAGAA GGCGCTG ATAA CAGCGCC TTATCTGCTTTAGCG PMI3006 3300031 - 3300777 + | hypothetical protein TERM 4270 3300794 - 3300813 + T 70 -6.4 -4.15854 | opp_overlap 3300796, overlap 3300796 CATAGATAACCCATA GAGGGG CGTGTCTC CCCCTC TTTTCCCGTAACTTT PMI3007 3301597 - 3300848 - | short chain dehydrogenase TERM 4271 3301718 - 3301686 - R 81 -10.5 -2.85124 | opp_overlap 3301691, overlap 3301685 GAAAATGATTGAAAC GGTCAGAGCGAGCGC TAT GCACTCGCACTAACT TAAAAAATTACAGCA TERM 4272 3301691 - 3301713 + r 71 -9 -2.53213 | opp_overlap 3301686 3301685 TGATTGAAACGGTCA GAGCGAGCGC TAT GCACTCGCAC TAACTTAAAAAATTA gdhA 3303066 - 3301726 - | NADP-specific glutamate dehydrogenase TERM 4273 3302149 - 3302129 - G 79 -11.1 -3.25341 | overlap 3302127 AGTGCAATATCAACA GCGACAGCC CAA GGCTGTTGC CCTTCAAGATAAGTT TERM 4274 3303293 - 3303276 - R 100 -7.7 -5.60993 | opp_overlap 3303276 3303278, overlap 3303255 3303278 TTTTGGACAAAAAAA TACCTGC ATAA GCAGGCA TTTTTTTTGCTTAAA TERM 4275 3303276 - 3303293 + r 95 -5.5 -5.95166 | opp_overlap 3303255 3303276 3303278, overlap 3303278 TTTTGGACAAAAAAA TACCTGC ATAA GCAGGCA TTTTTTTTGCTTAAA TERM 4276 3303291 - 3303278 - R 85 -8.1 -4.45201 | opp_overlap 3303278 3303276, overlap 3303255 3303276 TTGGACAAAAAAATA CCTGC ATAA GCAGG CATTTTTTTTGCTTA TERM 4277 3303278 - 3303291 + r 70 -8.1 -3.07657 | opp_overlap 3303255 3303276 3303278, overlap 3303276 TTGGACAAAAAAATA CCTGC ATAA GCAGG CATTTTTTTTGCTTA uspA 3303754 - 3303320 - | universal stress protein A uspB 3304168 - 3304500 + | universal stress protein B TERM 4278 3304540 - 3304521 - T 100 -9.3 -5.65177 | opp_overlap 3304521 ATAGGGATAAAAAAA CGGTGAC GAGTTA GTCACCG TTTCTCAATACTATT TERM 4279 3304521 - 3304540 + T 81 -9.3 -3.94811 | opp_overlap 3304521 ATAGGGATAAAAAAA CGGTGAC GAGTTA GTCACCG TTTCTCAATACTATT pitA 3306071 - 3304572 - | low-affinity inorganic phosphate transporter TERM 4280 3305247 - 3305284 + g 86 -9.3 -4.33675 | opp_overlap 3305254 3305256 AGCTGGTTGATGCTT CTCATAATACTGTTGTA AGTG TACAACGGCATCATGAG TTTTAGTGATATCGT TERM 4281 3305799 - 3305783 - G 93 -8.7 -5.31059 | opp_overlap 3305796, overlap 3305784 ACAGCAACGAAAAAA CCATGGC AAG GCCATGA GCCGAGCTCACATTT TERM 4282 3305798 - 3305784 - G 80 -10 -3.77008 | opp_overlap 3305796, overlap 3305783 CAGCAACGAAAAAAC CATGGC AAG GCCATG AGCCGAGCTCACATT TERM 4283 3306019 - 3306000 - G 70 -5.8 -4.37658 | gap 1 AATGGCTTCATAAAA TAGCAC-GA AAA TCAGTGCTA AAACCAACATTAAAC TERM 4284 3306415 - 3306425 + G 76 -2.4 -5.4111 | TATTATAGGTGCAGG GGCC GCT GGAC TTTTTTGTGCTTCTT TERM 4285 3307343 - 3307355 + G 77 -7.7 -4.21194 | overlap 3307338 ATAACGACGTTGCTA CAAGC ATG GCTTG TTTTACCTAATGGCA PMI3012 3306380 - 3307585 + | hypothetical protein TERM 4286 3307741 - 3307729 - f 79 -2.7 -5.86061 | opp_overlap 3307740, overlap 3307740 TTTGATTAAAAAAAA CACTT TAC AAATG ATAGTGAGAACCATT TERM 4287 3307842 - 3307858 + F 100 -9.4 -5.74684 | CAGTGTTTTACTTTA GCCAGC CGGGT GCTGGC TTTTTCTTTTTGTTA TERM 4288 3307986 - 3307974 - f 77 -7.7 -3.99917 | AAAAAATTTTAGAAA CCAGT GAA ACTGG TAAAGAAAGAGGCCA PMI3013 3308190 - 3308489 + | hypothetical protein PMI3014 3308737 - 3309438 + | hypothetical protein TERM 4289 3309502 - 3309530 + T 100 -11.8 -5.28176 | overlap 3309503 TTGTTTTCTTGTTAA CTCCCTGAGATG TCTTT CATCTCAGGGAA TTTTTTATCAATAAA TERM 4290 3309503 - 3309529 + T 100 -15.3 -3.76182 | overlap 3309502 TGTTTTCTTGTTAAC TCCCTGAGATG TCTTT CATCTCAGGGA ATTTTTTATCAATAA pckA 3311173 - 3309554 - | phosphoenolpyruvate carboxykinase [ATP] TERM 4291 3309886 - 3309870 - G 80 -10.9 -3.40867 | opp_overlap 3309865 3309862 3309862 GTATTCACTAAGTAA GCTTGTG CTC CACAAGC CTGCATACGTTTTAC TERM 4292 3310594 - 3310573 - G 70 -8.9 -3.25282 | opp_overlap 3310577, overlap 3310577 ACCAAGTACCACCAA TTAACTGAA TGCG TTCAGTTAA GTTGAAAGCAACGAA TERM 4293 3311348 - 3311331 - R 100 -8.4 -5.4505 | opp_overlap 3311331 3311344 TTGTTGAATAAAAAA GGACGC AAAATA GCGTCC TTTAGGGTGATTTAC TERM 4294 3311331 - 3311348 + r 75 -8.4 -3.65353 | opp_overlap 3311331, overlap 3311344 TTGTTGAATAAAAAA GGACGC AAAATA GCGTCC TTTAGGGTGATTTAC hslO 3312262 - 3311378 - | heat-shock chaperonin hslR 3312703 - 3312290 - | heat shock protein 15 TERM 4295 3312397 - 3312408 + g 76 -2.2 -5.47431 | overlap 3312397 ACGCATTCATTTTTC TTGC TAGA GCGA TTTTTTCTCTCTTGG umoB 3314885 - 3312777 - | flagellar operon control protein (membrane protein) TERM 4296 3313174 - 3313154 - G 76 -7.5 -4.28994 | opp_overlap 3313152 3313154, overlap 3313157 3313159 CATCACTGATTAAAA GCACACCAC CCG GTGGTGGAC TATTTAACAGTATTG TERM 4297 3313171 - 3313157 - G 75 -10 -3.14218 | opp_overlap 3313154 3313152, overlap 3313154 3313159 CACTGATTAAAAGCA CACCAC CCG GTGGTG GACTATTTAACAGTA TERM 4298 3314831 - 3314801 - G 70 -9.1 -3.1994 | gap 1, opp_overlap 3314800 3314799 GATATGAGCCATCAA GCCGCC-TTCTTTT AAAG AATAGAAAGGCGGC CATTATAAATAGGCT TERM 4299 3315165 - 3315185 + H 76 -6.3 -4.57209 | opp_overlap 3315165, overlap 3315169 TTTTCACTAAAAAGC TAAATCTAA TTG TTGGATTTA TTTTATCATTAATGT nudE 3315241 - 3315798 + | ADP compounds hydrolase TERM 4300 3315853 - 3315826 - T 71 -5.5 -4.56358 | opp_overlap 3315826 3315830 3315851, overlap 3315830 GATATCCAGATAAAA TTAAGGCCACC AAATAG GGAGGCCTTGA TATCTATCATCTCTT PMI3020 3316691 - 3315888 - | probable lipoprotein TERM 4301 3316900 - 3316884 - R 85 -8.1 -4.61868 | opp_overlap 3316886 GATTTACACACAAAA CATGAAA TAT TTTCATG TTGGAAGATGAGATG TERM 4302 3316971 - 3316946 - R 88 -6.9 -5.25699 | gap 1, opp_overlap 3316946 ATTAGATAACAAAAA GCGGGAAAAACA ATC TGTTAT-CCCGC TTTAGTTATTCGTTA TERM 4303 3316946 - 3316971 + r 71 -6.9 -4.11412 | gap 1, opp_overlap 3316946 ATTAGATAACAAAAA GCGGGAAAAACA ATC TGTTAT-CCCGC TTTAGTTATTCGTTA TERM 4304 3316983 - 3317005 + r 71 -2.1 -5.50774 | CCGCTTTAGTTATTC GTTAGAT CGCTATTTA ATCTAAC TTTTTGTTTATTATA mrcA 3319559 - 3317025 - | penicillin-binding protein 1A TERM 4305 3317527 - 3317517 - G 75 -8.2 -3.98214 | opp_overlap 3317517 3317514 ATCATGCATTAGAAA CGCC AGT GGCG TACTTATCACATGAG PMI3022 3319676 - 3320500 + | hypothetical protein PMI3023 3320488 - 3321087 + | fimbrial assembly protein PMI3024 3321071 - 3321604 + | hypothetical protein PMI3025 3321611 - 3322726 + | hypothetical protein TERM 4306 3322923 - 3322949 + F 73 -4.3 -5.05601 | ACGGATACATTTTAT GCACTTCCTCT TTCTT GGAGGTAGGGC TTTTTATATGTAATA TERM 4307 3323109 - 3323137 + F 91 -10.4 -4.01158 | gap 1, opp_overlap 3323099, overlap 3323099 3323111 CAAAGGGATTTTTAT CC-TGTGTTGTCG CTTG CGACAACACGTGG TTATTTAATAGCGTT TERM 4308 3323111 - 3323134 + F 89 -11.8 -3.05069 | overlap 3323109 AAGGGATTTTTATCC TGTGTTGTCG CTTG CGACAACACG TGGTTATTTAATAGC TERM 4309 3323590 - 3323604 + G 74 -6.4 -4.32678 | overlap 3323587 CCCGTAACCGACTAT CAGCAC GCG GTGTTG TTGTTTATTTAGAAA aroK 3323307 - 3323828 + | shikimate kinase I aroB 3323881 - 3324975 + | 3-dehydroquinate synthase damX 3325130 - 3326074 + | hypothetical protein TERM 4310 3326240 - 3326198 - g 82 -10.7 -3.53012 | opp_overlap 3326197 TGGGCTGGTGGTAAA TACCCTTTGGTAGATGACA TTAAG CGTCATCTACCTCAAGGTA ACTGTTTAATTGAAC dam 3326156 - 3326971 + | DNA adenine methylase rpe 3327016 - 3327690 + | ribulose-phosphate 3-epimerase gph 3327687 - 3328397 + | phosphoglycolate phosphatase TERM 4311 3328433 - 3328422 - g 93 -5.8 -5.67063 | opp_overlap 3328422 3328420 TTCAGTAGAAAAAAA GGCT CAAA AGCC TATTGTATTCAGTGG TERM 4312 3328666 - 3328652 - g 79 -5 -5.03314 | TTGATCCTGAAAAAA GCACAA TTT TTGTAC AATCTCATGTTCCAC trpS 3328399 - 3329427 + | tryptophanyl-tRNA synthetase PMI3033 3330696 - 3329488 - | transposase PMI3034 3330719 - 3331135 + | transposase TERM 4313 3331186 - 3331147 - T 85 -10.6 -3.39842 | opp_overlap 3331147 3331157, overlap 3331145 3331144 TTAGTTAAAAAACCA CACCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTG CTTTGGATAACTGCT TERM 4314 3331147 - 3331186 + T 81 -10.6 -2.80056 | opp_overlap 3331147 3331145 3331144, overlap 3331157 TTAGTTAAAAAACCA CACCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTG CTTTGGATAACTGCT TERM 4315 3331157 - 3331176 + T 95 -10.6 -4.18094 | opp_overlap 3331147 3331145 3331144, overlap 3331147 AACCACACCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG PMI3035 3331890 - 3331216 - | sulfur-carrier protein TERM 4316 3331975 - 3331949 - R 100 -18.2 -4.44448 | opp_overlap 3331952 AGCAGGCTAAATAAA CAATGCCGACAA TAA TTGTCGGCATTG ATAAATAGAGAGAAA TERM 4317 3331952 - 3331972 + r 100 -14.1 -3.18264 | opp_overlap 3331949 AGGCTAAATAAACAA TGCCGACAA TAA TTGTCGGCA TTGATAAATAGAGAG sodA 3332631 - 3332008 - | superoxide dismutase [Mn] TERM 4318 3332721 - 3332701 - H 84 -5.5 -5.50499 | opp_overlap 3332704 TTATAGTGAAAAAAA TGTTAATGA AAA TCATTATCA TATCCATATTATTTT TERM 4319 3332938 - 3332926 - H 70 -4.1 -5.03314 | CTTATGCGCAAAAAA GAAAC AAT GTCTC TTTACCCTCTTTTGT acs 3332999 - 3334957 + | acetyl-coenzyme A synthetase TERM 4320 3335004 - 3335036 + F 81 -9.9 -3.06815 | opp_overlap 3335005 3335014, overlap 3335014 TAAAACCAGAATACT ACTATGCAAAGGCAT TTT ATGCCTTTGCAGGGC TCTCTTACCACAAAT TERM 4321 3335035 - 3335005 - f 83 -11.2 -2.85004 | opp_overlap 3335004 3335014, overlap 3335014 AAAACCAGAATACTA CTATGCAAAGGCAT TTT ATGCCTTTGCAGGG CTCTCTTACCACAAA TERM 4322 3335014 - 3335026 + F 71 -7.7 -3.5525 | opp_overlap 3335005 3335014, overlap 3335004 ATACTACTATGCAAA GGCAT TTT ATGCC TTTGCAGGGCTCTCT TERM 4323 3335026 - 3335014 - f 73 -7.7 -3.6959 | opp_overlap 3335014 3335004, overlap 3335005 ATACTACTATGCAAA GGCAT TTT ATGCC TTTGCAGGGCTCTCT PMI3038 3335122 - 3335433 + | hypothetical protein actP 3335430 - 3337085 + | cation/acetate symporter TERM 4324 3337134 - 3337116 - f 100 -13.2 -3.57144 | opp_overlap 3337116 TTTTTTATTCTTAAA GTGCCAAC AAT GTTGGCAC TTTTTTTTACTCTTT TERM 4325 3337116 - 3337134 + F 100 -13.2 -5.9663 | opp_overlap 3337116 TTTTTTATTCTTAAA GTGCCAAC AAT GTTGGCAC TTTTTTTTACTCTTT TERM 4326 3338202 - 3338190 - g 90 -3.5 -6.04953 | opp_overlap 3338190 AGAGAAAGAAAAAAA TAATA TTT TATTA TTTAAGCAAGCTTAT TERM 4327 3338980 - 3338960 - g 80 -4.7 -5.33405 | overlap 3338962 GCTATCAAACAAAAA CGTCAATGA TGG TCATCGATG GTAATAAGAAGTTAT PMI3040 3337408 - 3339039 + | membrane-associated sulfatase PMI3043 3339858 - 3340274 + | transposase TERM 4328 3340303 - 3340322 + T 95 -10.6 -4.18094 | CCTTATATCCCCTAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG PMI3044 3341053 - 3340361 - | hypothetical protein PMI3045 3342475 - 3341057 - | iron-sulfur cluster-binding protein TERM 4329 3341765 - 3341775 + g 73 -6.8 -4.23723 | TTCCATCCCCATCAC CGCA ATA TGCG TTTTGGGTAATGTTG TERM 4330 3342024 - 3342034 + g 73 -5.4 -4.56133 | opp_overlap 3342024 GGGACCACTACATGA GATG GGG CATC TTTTGCTTGTTGAAG TERM 4331 3342238 - 3342226 - G 70 -3.4 -4.93877 | opp_overlap 3342226 TTTGAGCAAAGAAAA CATG CCCAC CATG TTGTTCTATTTTTTC PMI3046 3343203 - 3342466 - | oxidoreductase (cysteine-rich protein) TERM 4332 3343530 - 3343498 - H 100 -17.9 -2.57036 | opp_overlap 3343505, overlap 3343505 GAAATAGAATAAACG CAAAAAAGCCAACCC ATT GGGTTGGCTTTCTCG TCTTATTTAATGCTT TERM 4333 3343523 - 3343505 - H 100 -14.6 -5.25805 | opp_overlap 3343505, overlap 3343498 AATAAACGCAAAAAA GCCAACCC ATT GGGTTGGC TTTCTCGTCTTATTT TERM 4334 3343505 - 3343523 + H 100 -14.6 -4.11081 | opp_overlap 3343505 3343498 AATAAACGCAAAAAA GCCAACCC ATT GGGTTGGC TTTCTCGTCTTATTT TERM 4335 3343710 - 3343736 + H 82 -8.6 -4.15044 | overlap 3343728 3343733 TGAGACTCACCCCTT CGGGGCCAGTGC TCC GCACTGTTCCAG TTTGTTCCAGACAAA TERM 4336 3343733 - 3343755 + H 86 -11.4 -2.78049 | overlap 3343710 3343728 GTGCTCCGCACTGTT CCAGTTTGTT CCA GACAAACTGG TCGGTTTTAATCACT TERM 4337 3345475 - 3345493 + H 87 -10.3 -3.57798 | overlap 3345468 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4338 3346272 - 3346284 + H 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4339 3346635 - 3346621 - H 71 -8.6 -2.92371 | opp_overlap 3346621 3346618 ATTCAGTTAATGATA GTATCC ATT GGATAC TGGGTTTCCCCATTC TERM 4340 3347324 - 3347307 - H 74 -9.1 -3.07291 | opp_overlap 3347307 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 4341 3349070 - 3349081 + H 81 -3 -5.8901 | opp_overlap 3349070, overlap 3349058 TCTGAAGAGTCAAGA GTTT TTTC AAAC TTTTTTCTTTTCTCT PMI3047 3349328 - 3350014 + | GntR-family transcriptional regulator PMI3048 3350095 - 3351492 + | MFS-family transporter TERM 4342 3351537 - 3351511 - T 100 -13.2 -5.03994 | opp_overlap 3351516, overlap 3351516 GTTGAGATATAAAAA TAAAAGAGAGCC TAT AGCTCTCTTTTA TACGCCACTCTAAAT TERM 4343 3351516 - 3351532 + T 85 -8 -4.3739 | opp_overlap 3351511 3351516 GATATAAAAATAAAA GAGAGC CTATA GCTCTC TTTTATACGCCACTC TERM 4344 3351532 - 3351516 - T 100 -8.7 -5.38839 | opp_overlap 3351516, overlap 3351511 GATATAAAAATAAAA GAGAGCC TAT AGCTCTC TTTTATACGCCACTC rbsK 3352500 - 3351574 - | ribokinase TERM 4345 3353189 - 3353174 - g 71 -7.6 -3.81428 | ATTAATGAACGTAAA TTTCGC AATG GCGAAA ACGAAGTAAGTATTC PMI3050 3352781 - 3354280 + | ATPase PMI3051 3354288 - 3355745 + | hypothetical protein asnA 3356738 - 3355746 - | aspartate-ammonia ligase (asparagine synthetase A) TERM 4346 3356281 - 3356241 - G 71 -6.3 -4.16842 | opp_overlap 3356246, overlap 3356242 TTCAGTGTGAATAAA TTGAATTTGATCTGGCA GGAACGG TGTCAGACCAAATTCAT CGCTGACGGCTTTTT TERM 4347 3356280 - 3356242 - G 73 -9.8 -3.09784 | opp_overlap 3356246, overlap 3356241 TCAGTGTGAATAAAT TGAATTTGATCTGGCA GGAACGG TGTCAGACCAAATTCA TCGCTGACGGCTTTT asnC 3356899 - 3357360 + | AsnC-family transcriptional regulator mioC 3357461 - 3357901 + | flavoprotein involved in biotin synthesis gidA 3358281 - 3360179 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) TERM 4348 3360219 - 3360205 - g 81 -5.6 -5.03145 | overlap 3360207 TAATCGGTTAAAAAA GCTGGC AAA GCAAGC CAATATTGAGTTAAC TERM 4349 3360403 - 3360425 + G 89 -12 -3.52204 | overlap 3360401 CTTCATAGATGTTGG TACCGGGCCA GGA TTGCCCGGTA TTCCTTTAGCAATAA TERM 4350 3360588 - 3360578 - g 79 -5.4 -4.99861 | opp_overlap 3360578 TATCAAGTAGAAAAA CCAT TTG ATGG TGTGATTAGTCGTGC gidB 3360176 - 3360802 + | methyltransferase (glucose-inhibited division protein B) TERM 4351 3360849 - 3360877 + F 100 -16.3 -4.06055 | opp_overlap 3360858 TCATTTTTTGTGCTT TAGCGATAACATT TAC AATGTTATCGCTA TTTACTTTAAGGGAT TERM 4352 3361551 - 3361575 + G 80 -4.4 -5.31855 | gap 1 TTTTTTAGGTGGAAT TGC-ATGTTGG TTAC CCAATATTGCA TTTTTATTATTACTA atpI 3361417 - 3361794 + | ATP synthase protein I atpB 3361826 - 3362650 + | ATP synthase A chain atpE 3362696 - 3362935 + | ATP synthase C chain atpF 3362997 - 3363467 + | ATP synthase B chain atpH 3363480 - 3364013 + | ATP synthase delta chain atpA 3364028 - 3365569 + | ATP synthase alpha chain TERM 4353 3365578 - 3365602 + F 86 -11.5 -2.93723 | opp_overlap 3365576 3365573, overlap 3365573 CTGGTAATAACTATT CGGCCTAATAA TGA TCATTAGGCCG TCTGGTTCATGAGGA TERM 4354 3365733 - 3365721 - g 75 -7.7 -4.07568 | TCGCCGCGTCGAAAA TGCGT AAA ACGCA GGAACGCATGGCAGC atpG 3365627 - 3366490 + | ATP synthase gamma chain TERM 4355 3366574 - 3366553 - g 72 -9.4 -3.05935 | opp_overlap 3366552 AGATTGTCCAGGTAA TCGGCGCC GTAGTG GACGCCGA GTTCCCTCAGGATAG TERM 4356 3366662 - 3366639 - g 89 -6.7 -5.29846 | AATGGTAAAGAAAAA CTGGTGCTG GAAGTT CAGCAACAG TTAGGCGGTGGTATC atpD 3366525 - 3367907 + | ATP synthase beta chain atpC 3367929 - 3368345 + | ATP synthase epsilon chain TERM 4357 3368396 - 3368373 - f 100 -11.1 -5.1356 | opp_overlap 3368373 GTCCATGAATAAAAA GCCAGTTAG TTATAG CTAACTGGC TTTTTTGCTTTCAGA TERM 4358 3368373 - 3368396 + F 100 -11.8 -5.37593 | opp_overlap 3368373 GTCCATGAATAAAAA GCCAGTTAGT TATA GCTAACTGGC TTTTTTGCTTTCAGA glmU 3368496 - 3369869 + | bifunctional protein GlmU [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase] TERM 4359 3370838 - 3370824 - g 84 -7.8 -4.7497 | opp_overlap 3370824 TTTAGCCATTAAAAA CACCCT TGA AGGGCG TTTAAAAGCAGAAAG glmS 3370027 - 3371853 + | glucosamine--fructose-6-phosphate aminotransferase TERM 4360 3371881 - 3371911 + F 100 -12.6 -4.67755 | GTTTATTGCCAATTT TGCCCCGTATCTTA ATT TTAGGTGCGGGGCA TTTTTAACTCACTAT TERM 4361 3373342 - 3373318 - f 93 -10.1 -4.23054 | ACATAGTATTCAAAA CGGTAAAGTTA AAG TGACTTTACCG GCTAATGAACTACAC TERM 4362 3374257 - 3374267 + G 73 -6.8 -4.15197 | opp_overlap 3374246 AAAAGCTAATTTTCA GCGT GAC ACGC TTTATCTAATATTTG PMI3070 3373382 - 3375073 + | ABC transporter permease protein PMI3071 3375119 - 3376129 + | ABC transporter, substrate-binding protein TERM 4363 3376152 - 3376180 + F 80 -8.9 -3.64866 | opp_overlap 3376153 3376155, overlap 3376155 3376157 3376169 TTACTTTATTAATTA ATAGATAGGGTGC GAT GCACTCTATCTGG TTTAGGGTGTCATAT TERM 4364 3376179 - 3376153 - f 73 -8 -3.40371 | opp_overlap 3376152 3376155 3376157 3376169, overlap 3376155 TACTTTATTAATTAA TAGATAGGGTGC GAT GCACTCTATCTG GTTTAGGGTGTCATA TERM 4365 3376155 - 3376177 + F 100 -12.8 -2.93585 | opp_overlap 3376153 3376155, overlap 3376152 3376157 3376169 CTTTATTAATTAATA GATAGGGTGC GAT GCACTCTATC TGGTTTAGGGTGTCA TERM 4366 3376177 - 3376155 - f 83 -10.6 -3.27029 | opp_overlap 3376155 3376152 3376157 3376169, overlap 3376153 CTTTATTAATTAATA GATAGGGTGC GAT GCACTCTATC TGGTTTAGGGTGTCA TERM 4367 3376157 - 3376175 + F 76 -9.6 -3.01765 | opp_overlap 3376155 3376153, overlap 3376155 3376152 3376169 TTATTAATTAATAGA TAGGGTGC GAT GCACTCTA TCTGGTTTAGGGTGT TERM 4368 3376379 - 3376366 - g 71 -5.3 -4.57341 | AAGCGCCGGGAAAAA TGCTA GATT TAGCA AAAAATAGTCGTGAA PMI3072 3376194 - 3377321 + | oxidoreductase TERM 4369 3377404 - 3377363 - T 87 -10.7 -3.71527 | opp_overlap 3377362 3377363, overlap 3377374 TTTTAATTATCCAAA GCACCGTAAAACCCCGTCC TTCA GGTCGGGGATATAAGGCGC GGTTTTTTAACTAAC TERM 4370 3377393 - 3377374 - T 95 -10.6 -4.18094 | opp_overlap 3377363 3377362, overlap 3377363 CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGGGG ATATAAGGCGCGGTT PMI3073 3377831 - 3377415 - | transposase TERM 4371 3378487 - 3378474 - g 75 -8.1 -4.06502 | CAGTTTTAAAGTAAA CCAGC GAAA GCTGG CAAGGCTTCAACGGA PMI3074 3377854 - 3379011 + | transposase TERM 4372 3379161 - 3379137 - T 90 -5.8 -5.62045 | opp_overlap 3379137 3379156 AGAGAGAATAAAAAA GAGATGTCTA TTTTT TACACATCTC TTTTGCAATAACATA PMI3075 3379548 - 3379144 - | hypothetical protein PMI3078 3380513 - 3380226 - | hypothetical protein phnX 3381414 - 3380602 - | phosphonoacetaldehyde phosphonohydrolase TERM 4373 3381993 - 3381962 - H 71 -5.4 -4.57341 | opp_overlap 3381975, overlap 3381985 AATGCTCTCTAAAAA CAAGATAAAATAGT AAAA AGTATTTTATCTTA AACCTCTTTTCTATT PMI3080 3382289 - 3383422 + | amidohydrolase/metallopeptidase TERM 4374 3383835 - 3383846 + G 71 -7.2 -3.80019 | overlap 3383829 CATCCCTTGGGCTTG CGGC CAAT GCCG TTATTGCGTTTATCC TERM 4375 3384372 - 3384360 - g 74 -6.3 -4.37502 | ATGACTATATCAAAA CCTTT ATG AAAGG TGCTCAATCTTTAGT PMI3081 3383432 - 3384838 + | C4-dicarboxylate anaerobic carrier TERM 4376 3384916 - 3384890 - T 80 -7.4 -4.62622 | gap 1, opp_overlap 3384891 3384892, overlap 3384891 3384892 TTAAGTATAAATAAA GTGCCGTTTGT TTAGTT ACAAACGGC-C TTTTTAAACCAACCT TERM 4377 3384891 - 3384916 + T 82 -7.6 -4.56775 | opp_overlap 3384890 3384891 3384892, overlap 3384892 TAAGTATAAATAAAG TGCCGTTTGT TTAGTT ACAAACGGCC TTTTTAAACCAACCT TERM 4378 3384915 - 3384892 - T 82 -11.1 -2.60809 | opp_overlap 3384891 3384892, overlap 3384890 3384891 AAGTATAAATAAAGT GCCGTTTGT TTAGTT ACAAACGGC CTTTTTAAACCAACC TERM 4379 3384892 - 3384915 + T 85 -11.1 -3.33744 | opp_overlap 3384892 3384890 3384891, overlap 3384891 AAGTATAAATAAAGT GCCGTTTGT TTAGTT ACAAACGGC CTTTTTAAACCAACC PMI3082 3385569 - 3384931 - | TetR-family transcriptional regulator TERM 4380 3385680 - 3385666 - H 71 -8.6 -2.88653 | overlap 3385663 3385661 GAAAGTTAAATATCA CTAAGC TTC GCTTAG GAGTAGAAAGATGGA PMI3083 3385691 - 3386791 + | multidrug efflux protein PMI3084 3386784 - 3388304 + | multidrug efflux protein (MFS-family transporter) TERM 4381 3388330 - 3388309 - T 100 -10.2 -5.83211 | TAGTAAAATAAAAAA CTGCCTGT TTTAGT ACAGGCAG AAAATAAAATAAGAA PMI3085 3388851 - 3388399 - | hypothetical protein TERM 4382 3388978 - 3389030 + r 71 -5.4 -4.56736 | opp_overlap 3388993, overlap 3388982 3388993 3389025 AATAATATAAATGTC TACATAAATA-AAAAAGCCTTGATAT AAC ATATCAAGGCTTTATATATTAAT-TA TTTTAATTATTAACT TERM 4383 3388982 - 3389027 + r 88 -8.7 -4.38092 | gap 1, opp_overlap 3388993, overlap 3388978 3388993 3389025 ATATAAATGTCTACA TAAATA-AAAAAGCCTTGATAT AAC ATATCAAGGCTTTATATATTAA TTATTTTAATTATTA TERM 4384 3388993 - 3389015 + r 100 -13.6 -4.24534 | opp_overlap 3388993, overlap 3388982 3388978 TACATAAATAAAAAA GCCTTGATAT AAC ATATCAAGGC TTTATATATTAATTA TERM 4385 3389015 - 3388993 - R 100 -13.6 -5.76237 | opp_overlap 3388993 3388982 3388978 TACATAAATAAAAAA GCCTTGATAT AAC ATATCAAGGC TTTATATATTAATTA PMI3086 3389707 - 3389033 - | fimbrial chaperone TERM 4386 3389340 - 3389352 + g 74 -4.1 -5.13741 | AACATCGCAATATCT TGTCT GAT AGGCA TTTTTGTTGAATTGA TERM 4387 3390611 - 3390596 - R 70 -6.2 -4.34859 | opp_overlap 3390609 ATTAAAAGACATAAA TGGAAA TCTT TTTCCA TAAGAAATGGTATTT TERM 4388 3391164 - 3391183 + r 75 -8 -3.69395 | opp_overlap 3391179 TTTTTTAAGTCTTTA TTTGATGT AATA ACATCAAA TTCTTGAATAGTACC TERM 4389 3392106 - 3392092 - R 72 -3.6 -5.30348 | overlap 3392095 AGCTAATAATAAAAA TATCAT TTT ACGATA TCGAAAATGCATAAT PMI3089 3392793 - 3392155 - | fimbrial subunit TERM 4390 3393080 - 3393027 - R 100 -11.6 -4.93318 | gap 1, opp_overlap 3393030 3393041, overlap 3393030 3393041 GATAATTTATAAAAA TATTTAAATAAAAACGTAAGAAACC CAAAT GATTTCTTACGTTTTT-TTTAATTA AATTCCGAATTGGAA TERM 4391 3393030 - 3393077 + r 85 -11.1 -3.18199 | gap 1, opp_overlap 3393027 3393030 3393041, overlap 3393041 AATTTATAAAAATAT TTAAATAAAAACGTAAGAAACC CAAAT GATTTCTTACGTTTTT-TTTAA TTAAATTCCGAATTG TERM 4392 3393077 - 3393030 - R 100 -13.3 -3.03589 | gap 1, opp_overlap 3393030 3393041, overlap 3393027 3393041 AATTTATAAAAATAT TTAAATAAAAACGTAAGAAACC CAAAT GATTTCTTACGTTTTT-TTTAA TTAAATTCCGAATTG TERM 4393 3393041 - 3393067 + r 100 -8.1 -5.95166 | opp_overlap 3393030 3393027 3393041, overlap 3393030 ATATTTAAATAAAAA CGTAAGAAACC CAAAT GATTTCTTACG TTTTTTTTAATTAAA TERM 4394 3393067 - 3393041 - R 100 -10.3 -5.31519 | opp_overlap 3393041 3393030, overlap 3393030 3393027 ATATTTAAATAAAAA CGTAAGAAACC CAAAT GATTTCTTACG TTTTTTTTAATTAAA PMI3090 3393740 - 3393078 - | fimbrial subunit TERM 4395 3394003 - 3394028 + r 100 -7.1 -5.84381 | overlap 3394004 TTATTTGATGGAGTT TCTATATTTTA TACC TAAAATATAGG TTTTTTTCTTGATGG TERM 4396 3394004 - 3394027 + r 79 -8.4 -4.09002 | overlap 3394003 TATTTGATGGAGTTT CTATATTTTA TACC TAAAATATAG GTTTTTTTCTTGATG TERM 4397 3394086 - 3394122 + r 100 -14.1 -4.33808 | opp_overlap 3394088 3394091, overlap 3394088 GTTTTTGTGGAAAAT AAGAATGTAAGAAATTA GTT TAATTTCTTACATTCTA TTTTAAATTAATTTA TERM 4398 3394120 - 3394088 - R 100 -16.7 -4.17048 | opp_overlap 3394086 3394088, overlap 3394091 TTTTGTGGAAAATAA GAATGTAAGAAATTA GTT TAATTTCTTACATTC TATTTTAAATTAATT TERM 4399 3394088 - 3394120 + r 100 -16.7 -3.75653 | opp_overlap 3394088 3394091, overlap 3394086 TTTTGTGGAAAATAA GAATGTAAGAAATTA GTT TAATTTCTTACATTC TATTTTAAATTAATT TERM 4400 3394117 - 3394091 - R 100 -12.6 -4.20868 | opp_overlap 3394088 3394086, overlap 3394088 TGTGGAAAATAAGAA TGTAAGAAATTA GTT TAATTTCTTACA TTCTATTTTAAATTA PMI3091 3394810 - 3394154 - | fimbrial subunit TERM 4401 3395209 - 3395155 - R 77 -4.1 -5.32565 | opp_overlap 3395168, overlap 3395168 TAATGAATGAAAAAA CATATAATAA-AAAGTGTAAGGTAATT GTT AAATACCTTACACTTTATTAATAT-TA AATACCAAATTGAAA TERM 4402 3395196 - 3395168 - R 100 -11.9 -5.28561 | opp_overlap 3395168, overlap 3395155 AACATATAATAAAAA GTGTAAGGTAATT GTT AAATACCTTACAC TTTATTAATATTAAA TERM 4403 3395168 - 3395196 + r 100 -11.9 -4.33153 | opp_overlap 3395168 3395155 AACATATAATAAAAA GTGTAAGGTAATT GTT AAATACCTTACAC TTTATTAATATTAAA PMI3092 3395872 - 3395207 - | fimbrial subunit TERM 4404 3396026 - 3396011 - R 76 -3.3 -5.43514 | overlap 3396004 AAAACAATCAAAAAA GCTTT TGTGAC AAAGC TAACAATAAAACGGT TERM 4405 3396153 - 3396125 - R 77 -3.9 -5.47159 | GGGAATAAATAAAAA GACACATAATGTT TTA ATCTTTATATGTC TTTTTAAAGAGTATA PMI3093 3396574 - 3396170 - | hypothetical protein TERM 4406 3396342 - 3396360 + g 76 -7.5 -4.28254 | AAAACATAAAGCTCA TCACCAA TTTTT TTGGTGA TTTTGCCTGTTAAGA PMI3094 3397307 - 3396723 - | hypothetical protein TERM 4407 3397363 - 3397390 + r 74 -7.8 -3.83921 | gap 1, opp_overlap 3397361 3397363 3397366, overlap 3397366 AATCTACTGTAAAGA GAAGAGCCTTTCT GTT AGAT-GGCTCTTC TTCTATTATATTCAG TERM 4408 3397390 - 3397363 - R 71 -7.8 -3.3879 | gap 1, opp_overlap 3397363 3397366, overlap 3397361 3397366 AATCTACTGTAAAGA GAAGAGCCTTTCT GTT AGAT-GGCTCTTC TTCTATTATATTCAG PMI3095 3398313 - 3397402 - | ROK-family protein TERM 4409 3398570 - 3398553 - H 71 -2.1 -5.47159 | gap 1, opp_overlap 3398553 3398556, overlap 3398556 TTTTAATAGAAAAAA CTA-TCAT AAA ATGACTAG TTTTTAGATTTTAAT PMI3096 3399757 - 3400152 + | hypothetical protein TERM 4410 3400209 - 3400225 + F 74 -6.7 -4.31293 | ATAGCTATTGGTATT TTCTTTT TTT AAAAGAA TTTATTGGTCTATCG PMI3097 3400249 - 3402414 + | cellulose synthase catalytic subunit [UDP-forming] PMI3098 3402417 - 3404765 + | cellulose biosynthesis protein B TERM 4411 3405052 - 3405034 - g 76 -4.5 -5.04222 | overlap 3405037 CAAGGAAATGAAAAA CAAGCCA GCTAT TGGCGTG AAAAACTGGCACGGA TERM 4412 3405049 - 3405037 - g 71 -4.8 -4.58698 | overlap 3405034 GGAAATGAAAAACAA GCCA GCTAT TGGC GTGAAAAACTGGCAC TERM 4413 3406066 - 3406056 - g 93 -6.8 -5.37865 | TCAACAAGGAAAAAA CAGC CAA GCTG AGCAGTTAGTAGCAA TERM 4414 3406398 - 3406372 - g 90 -8.8 -5.07486 | TATGTTGAACAAAAA CAGTGGGATAAA GTT TTTACCCTACTG AACAATCAACCTCAA TERM 4415 3407601 - 3407589 - g 79 -4.8 -5.1285 | opp_overlap 3407600 AAAAAACAAAATAAA CGCA GATGA TGCG GGAAGCCAGCGGGCT PMI3099 3404776 - 3408462 + | cellulose biosynthesis protein C PMI3100 3408478 - 3408948 + | cellulose biosynthesis protein TERM 4416 3408977 - 3408955 - f 88 -6.4 -5.42164 | GATAAATAATAAAAA CTATGCTT TATTGAT AAGCATAG GAGGAAAAAATGAGT PMI3101 3408987 - 3409892 + | signaling protein TERM 4417 3409952 - 3409937 - f 82 -4.7 -5.48514 | ATTAATAAATAAAAA TCTCC TTATCT GGAGA GGGATACTTATATTT TERM 4418 3410012 - 3410001 - f 74 -3 -5.40279 | overlap 3409991 GAAAAGAAAATAAAA GAAA TTAT TTTC AATTAATAACAATGT galU 3410065 - 3411027 + | UTP--glucose-1-phosphate uridylyltransferase TERM 4419 3411663 - 3411681 + G 75 -8.2 -4.06491 | ACCCCTCCTATTTTA TCTTTCCG GCA TGGAAAGA TTTCTATCGAGTTAG celY 3411101 - 3412138 + | cellulase TERM 4420 3412197 - 3412167 - T 82 -7.7 -4.38129 | opp_overlap 3412173, overlap 3412173 ATATAACCATTAAAA TAAAAAGAGGCTA GTTAT CAGCCTCTTTTTT GTTCGATATCAGGAC TERM 4421 3412191 - 3412173 - T 93 -6.7 -5.50723 | opp_overlap 3412173, overlap 3412167 CCATTAAAATAAAAA GAGGCTA GTTAT CAGCCTC TTTTTTGTTCGATAT TERM 4422 3412173 - 3412191 + T 86 -6 -5.49234 | opp_overlap 3412173 3412167 CCATTAAAATAAAAA GAGGCT AGTTATC AGCCTC TTTTTTGTTCGATAT TERM 4423 3412285 - 3412301 + T 70 -6.5 -4.16182 | opp_overlap 3412284 TTGAAAATTAATTAT CTTTGCC ACC GGCAACG TTTAATTTGTCATAA PMI3104 3413926 - 3412277 - | hypothetical protein selB 3415897 - 3414035 - | selenocysteine-specific elongation factor TERM 4424 3415345 - 3415387 + g 71 -7.1 -3.83155 | gap 1, opp_overlap 3415343 3415345 3415350 CTTTAATACTAAATA CACGATCAATTGC-TAAGCG AAAA CGCTTATGCCATTGAGGGTG TTGTTGCTCTTGCTG selA 3417285 - 3415894 - | L-seryl-tRNA(sec) selenium transferase fdhE 3418221 - 3417301 - | formate dehydrogenase formation protein TERM 4425 3417656 - 3417683 + g 74 -6.4 -4.35524 | gap 1, opp_overlap 3417661 3417662, overlap 3417662 CTGTTACAAACGGGG CAAAAT-TGGCGA TTT TCGCCATATTCTG TTTTCGCTTTACCGG TERM 4426 3417676 - 3417662 - G 75 -10 -3.07283 | opp_overlap 3417656 3417662, overlap 3417661 CAAACGGGGCAAAAT TGGCGA TTT TCGCCA TATTCTGTTTTCGCT TERM 4427 3417662 - 3417676 + g 79 -10 -3.5698 | opp_overlap 3417662 3417661, overlap 3417656 CAAACGGGGCAAAAT TGGCGA TTT TCGCCA TATTCTGTTTTCGCT TERM 4428 3417766 - 3417751 - G 70 -5.4 -4.41348 | TGCCGCCCAAATAAA CACTGA TTTA TCAGCG GAAACTTTTGAGTAT TERM 4429 3418371 - 3418392 + r 87 -8.7 -4.15788 | opp_overlap 3418371 TAAATAAAATAAAAA CGGAGGC AACAGTCA GCCTCCG TTTGTTCAGCAAATT TERM 4430 3418392 - 3418371 - R 100 -8.7 -5.67711 | opp_overlap 3418371 TAAATAAAATAAAAA CGGAGGC AACAGTCA GCCTCCG TTTGTTCAGCAAATT fdoI 3419076 - 3418420 - | formate dehydrogenase-O gamma subunit TERM 4431 3419094 - 3419107 + r 71 -6.7 -4.10429 | TTGCTCCTCCTTATT CACAG AGGT CTGTG TTTTAGAAGATGCTT fdoH 3420011 - 3419073 - | formate dehydrogenase-O beta subunit TERM 4432 3419928 - 3419967 + g 82 -11.6 -3.14132 | gap 1 AAGTTTTGCCACTTC TTCCTTGTAATCCCGCACT TGT GGTGCGGGAGTA-AGGGAA TTGGTGGCAGAGCGA fdoG 3423070 - 3420023 - | formate dehydrogenase-O, major subunit TERM 4433 3421293 - 3421311 + g 77 -10.4 -3.35597 | overlap 3421290 TCACCGTGGTTTTGC CAGAAACA AGA TGTTTCTG TATTTAACGGATCCA TERM 4434 3422014 - 3422036 + g 77 -7.7 -4.29738 | overlap 3422012 GAGGATGTTGAAGCG TGGTGTCGC GTTTA GCGAAACCA TTTTCATCCATCTCG TERM 4435 3422587 - 3422603 + g 73 -8 -3.90291 | AGGCACAAAGCATCC CCGTTG ATAAC CAACGG TTTACTTCAACACCT fdhD 3423250 - 3424080 + | formate dehydrogenase accessory protein PMI3113 3424847 - 3424077 - | hypothetical protein TERM 4436 3424409 - 3424421 + g 89 -5.5 -5.48825 | opp_overlap 3424409 CAGGTACAGCAACAC CGAGG TAA CCTTG TTTTTTTGCATGCTC PMI3114 3425733 - 3424858 - | glycosyltransferase TERM 4437 3425646 - 3425630 - G 75 -8.1 -4.07687 | opp_overlap 3425633 ATGGGGTGGCGAAAA TTAGGTT GAT AACCTAA GTTACGAATAAATTT umoA 3426567 - 3426025 - | upregulatior of flagellar operon (exported protein) TERM 4438 3427044 - 3427031 - g 76 -3.1 -5.33405 | TCCATTAAACAAAAA GCACA ACAG TATGC AATGGCTATTGGTGT PMI3116 3426782 - 3427753 + | carbon-nitrogen hydrolase TERM 4439 3428495 - 3428478 - g 75 -2.7 -5.30575 | opp_overlap 3428478 3428479, overlap 3428479 GAAAAAGGGAAAAAA CTGTATC AGCA GATACAT GCTTTTTTACAACAG PMI3117 3427878 - 3428765 + | LysR-family transcriptional regulator TERM 4440 3428900 - 3428887 - f 74 -3.9 -5.252 | CACTCTCACAAAAAA TAAAC ATAA GTTTA TAAAGGTTTTATTTA PMI3118 3429180 - 3429980 + | hypothetical protein TERM 4441 3430066 - 3430091 + F 95 -4.1 -6.15259 | opp_overlap 3430066, overlap 3430088 GCTAGTTTTTAGCAA CAGATAATC AAATATAC GGTTATCTG TTTTTTTTTGCCTTA PMI3119 3430155 - 3431507 + | hypothetical protein TERM 4442 3434252 - 3434242 - g 75 -5.4 -4.7254 | opp_overlap 3434245 3434247 ATCGGGTATTAAAAA CTGT ATG ACAG GGGGATACCCTGGCG PMI3120 3431552 - 3434629 + | TonB-dependent receptor PMI3121 3434657 - 3435460 + | TonB-like protein TERM 4443 3435495 - 3435469 - T 87 -5.3 -5.52096 | opp_overlap 3435469 AAATTGAATAAAAAA TACCTAAGT CAATATTAC ACTTAGGTA TTTTATGGAAATAAA PMI3122 3437475 - 3435514 - | hypothetical protein TERM 4444 3435976 - 3435988 + g 78 -4.1 -5.22312 | CCCATGATTTAAATC GAGTT CAT AGCTC TTTTTTGCTGTGGGT PMI3123 3438436 - 3437507 - | phosphoesterase TERM 4445 3437749 - 3437767 + g 70 -3.1 -4.83615 | TATATTTAAAGAAGG TCAGCTC TTCTT GAGATGA TTTTTCTGGGAAGTG PMI3124 3439085 - 3438621 - | hypothetical protein hipA 3440801 - 3439488 - | regulatory protein TERM 4446 3439935 - 3439924 - G 72 -4.4 -4.73108 | TTCATAAAATGAAAA CGAT CTTG ATCG GCATTTGATGAGCCA TERM 4447 3440427 - 3440441 + g 85 -7.2 -4.9181 | TAGAATTTTTTCAAG CTCAAT ATC ATTGAG TTTTTGATATTCTAT hipB 3441059 - 3440802 - | transcriptional regulator TERM 4448 3441197 - 3441150 - R 91 -12.3 -3.39327 | opp_overlap 3441149 3441148, overlap 3441171 3441177 CGTGTAGAGTTATAA TTACCTGCTATAACCGGTAAA GTAATA TTTACACGCTATAGCAGGTAA AGTTTGGTCGTTACT trmE 3442572 - 3441208 - | probable tRNA modification GTPase TERM 4449 3442314 - 3442326 + g 74 -9.1 -3.56325 | opp_overlap 3442312 AGTCGAGAATAATTG GGCCA CCA TGGCC TTGTAGTTCTAAAAC TERM 4450 3442390 - 3442380 - G 72 -4.6 -4.69053 | GATTAGGGAAGAAAA GGGC GAT ACCC TGATCAAGCACTGAG TERM 4451 3442658 - 3442615 - R 100 -9.8 -4.87786 | gap 1, opp_overlap 3442621 3442623 3442624 3442628, overlap 3442623 3442625 TTAATCGTATAAAAA TAAAAAAACAGAAGGCGGCCT ATT AGACCGCCTTC-ACTATTTTA TGTCACTTTTCTTTG TERM 4452 3442623 - 3442651 + r 72 -7.3 -3.89301 | opp_overlap 3442615 3442623 3442625, overlap 3442621 3442624 3442628 ATAAAAATAAAAAAA CAGAAGGCGGCCT ATT AGACCGCCTTCAC TATTTTATGTCACTT TERM 4453 3442651 - 3442623 - R 100 -9.5 -6.23317 | opp_overlap 3442623 3442621 3442624 3442628, overlap 3442615 3442625 ATAAAAATAAAAAAA CAGAAGGCGGCCT ATT AGACCGCCTTCAC TATTTTATGTCACTT TERM 4454 3442624 - 3442650 + r 83 -10.8 -2.92496 | opp_overlap 3442623 3442615 3442625, overlap 3442623 3442621 3442628 TAAAAATAAAAAAAC AGAAGGCGGCCT ATT AGACCGCCTTCA CTATTTTATGTCACT TERM 4455 3442649 - 3442625 - R 100 -16.5 -4.70159 | opp_overlap 3442624 3442623 3442621 3442628, overlap 3442623 3442615 AAAAATAAAAAAACA GAAGGCGGCCT ATT AGACCGCCTTC ACTATTTTATGTCAC TERM 4456 3442628 - 3442646 + r 82 -10.2 -3.31575 | opp_overlap 3442625 3442623 3442615, overlap 3442624 3442623 3442621 AATAAAAAAACAGAA GGCGGCCT ATT AGACCGCC TTCACTATTTTATGT oxaA 3444350 - 3442710 - | inner membrane protein PMI3129 3444613 - 3444353 - | hypothetical protein rnpA 3444936 - 3444577 - | ribonuclease P protein component TERM 4457 3444927 - 3444948 + gr 71 -3.8 -5.00196 | gap 1, opp_overlap 3444927, overlap 3444929 3444930 CCCTTGGAAAAGCGA GCTTAACCA CGGAA TGGTTA-GC TTTTATTATTTCGAA rpmH 3445097 - 3444954 - | 50s ribosomal protein l34 dnaA 3445820 - 3447220 + | chromosomal replication initiator protein TERM 4458 3447281 - 3447260 - g 72 -8.7 -3.57883 | opp_overlap 3447259, overlap 3447249 AGAACAGCTGCTAAA GCCGCTG CAACAAGT CAGCGGC CCTTTAGGCGGTCGC dnaN 3447225 - 3448328 + | DNA polymerase III beta subunit TERM 4459 3448711 - 3448701 - g 73 -8.2 -3.82604 | CGATGCAATTAATAA CCCC TGA GGGG TTCACATTACTTAAT recF 3448340 - 3449428 + | dna replication and repair protein TERM 4460 3450504 - 3450488 - g 71 -6.5 -4.27316 | CTTCTGAAGTTAAAA CAGCGGT AGA AACGCTG ATGAATGAGAAGCTG gyrB 3449449 - 3451863 + | DNA gyrase subunit B TERM 4461 3451918 - 3451884 - T 70 -7.3 -3.64703 | opp_overlap 3451889, overlap 3451889 TTTTCTTGAGTCAAA CAAAACCCGCTAA TTCAATAGG TTAGCGGGTTTTT TATATCTATAGTATT TERM 4462 3451889 - 3451913 + T 100 -8.6 -5.4492 | opp_overlap 3451884 3451889 TTGAGTCAAACAAAA CCCGCTAATT CAATA GGTTAGCGGG TTTTTTATATCTATA TERM 4463 3451913 - 3451889 - T 86 -7.2 -4.90778 | opp_overlap 3451889, overlap 3451884 TTGAGTCAAACAAAA CCCGCTAA TTCAATAGG TTAGCGGG TTTTTTATATCTATA asd 3453049 - 3451943 - | aspartate-semialdehyde dehydrogenase TERM 4464 3452156 - 3452175 + g 71 -7.2 -3.90588 | TACCCAATCATTATG TTGGGCAA GCAA TTGCTCAA TTTCGTTAACCGGTA PMI3137 3453549 - 3454112 + | methyltransferase PMI3138 3454388 - 3455287 + | phosphosugar binding/isomerase PMI3140 3455806 - 3455943 + | transposase TERM 4465 3456221 - 3456231 + T 71 -5.4 -4.73448 | GATTTAATGGCTCAT TTCG CCG CGAA TTTTTAAATGTGTAT TERM 4466 3456417 - 3456441 + T 74 -7.8 -3.93004 | opp_overlap 3456417 3456411 AGTGGACAACCAAAA GTGGACGCCG AAAAA CGTTGTCCAC TTTATGGCGTATTAT PMI3141 3458798 - 3456453 - | restriction endonuclease PMI3142 3460334 - 3458799 - | DNA modification methyltransferase PMI3143 3461587 - 3460331 - | DNA modification methyltransferase TERM 4467 3460678 - 3460668 - G 78 -4 -5.23292 | TCATATAAAACAAAA GTAT CTA ATAC GTGGTAGTATCGAGA PMI3144 3461830 - 3461648 - | excisionase PMI3145 3461951 - 3462133 + | hypothetical protein TERM 4468 3462118 - 3462168 + F 86 -11.4 -2.82987 | gap 1, opp_overlap 3462099 3462118 CAAAGTCTATGAAAG TCTGGACTTCGGCTGACAATTAG TTTTTT CTAGTTGT-AGCCGGAGGTCAGA TATGATGAATATTAA PMI3146 3462173 - 3463177 + | integrase PMI3150 3464768 - 3463905 - | hypothetical protein rph 3464895 - 3465611 + | ribonuclease PH TERM 4469 3465627 - 3465642 + F 100 -9 -5.76633 | ATTCTATTTTTTAAG GCGACT GAAA AGTCGC TTTTTTTATGTCTAA pyrE 3465693 - 3466337 + | orotate phosphoribosyltransferase TERM 4470 3466406 - 3466382 - T 100 -7.8 -5.76949 | gap 1, overlap 3466383 3466384 TAGCTGTAAAAAAAA GCCCTCGCCCA ATAA TGGGCG-GGGT GAGTAGTACAATGAA TERM 4471 3466405 - 3466383 - T 100 -11.3 -4.05085 | gap 1, overlap 3466382 3466384 AGCTGTAAAAAAAAG CCCTCGCCCA ATAA TGGGCG-GGG TGAGTAGTACAATGA TERM 4472 3466405 - 3466384 - T 87 -11.5 -3.01966 | overlap 3466383 3466382 GCTGTAAAAAAAAGC CCTCGCCCA ATAA TGGGCGGGG TGAGTAGTACAATGA slmA 3467261 - 3466656 - | TetR-family transcriptional regulator TERM 4473 3467335 - 3467303 - R 90 -10.8 -3.93708 | AAACAAATCAGTAAA CCTTTGCACTAA ATAAAAACG TTAGTGCAAAGG GAGTGATATCGTCAT dut 3467836 - 3467381 - | deoxyuridine 5'-triphosphate nucleotidohydrolase coaBC 3469031 - 3467823 - | coenzyme A biosynthesis bifunctional protein [includes: phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase] radC 3469339 - 3470010 + | DNA repair protein rpmB 3470258 - 3470494 + | 50S ribosomal protein L28 rpmG 3470506 - 3470673 + | 50S ribosomal rotein L33 TERM 4474 3470688 - 3470719 + F 85 -10.3 -3.551 | opp_overlap 3470695, overlap 3470695 ATTTTAGTTCTCTGA AAAAAAACCCGAC CTTAGC GTCGGGTTTTTTG TTATCTGGCTTGCGC TERM 4475 3470712 - 3470695 - f 100 -8.4 -5.75342 | opp_overlap 3470688 3470695 TTCTCTGAAAAAAAA CCCGAC CTTAGC GTCGGG TTTTTTGTTATCTGG TERM 4476 3470695 - 3470712 + F 100 -8.4 -5.60689 | opp_overlap 3470695, overlap 3470688 TTCTCTGAAAAAAAA CCCGAC CTTAGC GTCGGG TTTTTTGTTATCTGG TERM 4477 3471390 - 3471379 - g 80 -4.4 -5.33785 | AAGCACGAGAAAAAA TAGG TGTG CCTA ATAAACCTACATTAG PMI3159 3470823 - 3471950 + | glycosyl transferase TERM 4478 3472807 - 3472834 + G 71 -7 -3.96932 | opp_overlap 3472817, overlap 3472810 CAGGGCAAGTCTCTA TGCGCGAAAATG CTGC CATTATGGCGCA TTTGTCGCTCTATAT TERM 4479 3472810 - 3472842 + G 78 -10.8 -2.99947 | opp_overlap 3472817, overlap 3472807 GGCAAGTCTCTATGC GCGA-AAATGCTGCCA TTA TGGC-GCATTTGTCGC TCTATATCGGGGTTG PMI3160 3472089 - 3473090 + | glycosyl transferase PMI3161 3473094 - 3474200 + | glycosyl transferase TERM 4480 3474533 - 3474545 + G 79 -3.3 -5.40072 | CTGGCTGAGAACCAT GCAGA TAT TCCGC TTTTTTTCGAAAGCC PMI3162 3474200 - 3475375 + | glycosyl transferase rfaL 3476636 - 3475368 - | O-antigen ligase TERM 4481 3477231 - 3477212 - g 91 -2.1 -6.20267 | overlap 3477214 3477223 GCAAAAATAAAAAAA TCGCCAT CAAACC ATGGCTA ATGGATAACAAGCTG mutM 3476758 - 3477582 + | formamidopyrimidine-DNA glycosylase coaD 3478064 - 3477579 - | phosphopantetheine adenylyltransferase waaE 3478833 - 3478054 - | lipopolysaccharide core biosynthesis glycosyl transferase waaA 3480110 - 3478833 - | KDO transferase TERM 4482 3480501 - 3480511 + G 75 -2.6 -5.26875 | TGAGAATTTCTCTGC TATT GAA AATA TTTTTTCCTTAGACA TERM 4483 3481209 - 3481196 - g 72 -4.5 -4.77036 | opp_overlap 3481196, overlap 3481197 CTTCAGCACTAAAAA CGCCA CTGG TGGCA CTGTTTGGTCCATCA waaQ 3480328 - 3481392 + | lipopolysaccharide core biosynthesis glycosyl transferase TERM 4484 3481821 - 3481806 - g 70 -3.3 -4.92314 | ATGAACGCAGAAAAA GAGAT GTATCA ATCTC CTGAGCTAAAACGGG wabG 3481389 - 3482519 + | lipopolysaccharide core biosynthesis glycosyl transferase wabH 3482516 - 3483613 + | lipopolysaccharide core biosynthesis glycosyl transferase PMI3171 3483650 - 3484612 + | lipopolysaccharide core biosynthesis protein TERM 4485 3484718 - 3484731 + G 71 -3.9 -5.00616 | ATCTGATATCAAATT TAACA GTAT TGTTA TTTTTTCAACCACAG PMI3172 3484614 - 3485675 + | lipopolysaccharide core biosynthesis glycosyl transferase TERM 4486 3485692 - 3485671 - T 88 -6.7 -5.1523 | opp_overlap 3485671 TTGATAAGATAAAAA GATAAGATA TTAA TACCTTATC TTTTAGAGTTTATTT PMI3173 3486610 - 3485702 - | glycosyltransferase TERM 4487 3485765 - 3485800 + g 83 -7.2 -4.72863 | opp_overlap 3485765, overlap 3485756 3485755 3485760 3485781 TATTGATTTATCAAA GATAAAATTAATTAAG TTAA TTTTATTAATTTTATC TTTTAATTTATTTAC TERM 4488 3485781 - 3485793 + g 70 -3.5 -4.93333 | opp_overlap 3485765, overlap 3485765 3485760 ATAAAATTAATTAAG TTAAT TTT ATTAA TTTTATCTTTTAATT TERM 4489 3485821 - 3485835 + g 90 -8.6 -4.87328 | ATTTATTTACTGTAT CAGAAC TAA GTTCTG TTTTATATTTATATA TERM 4490 3486447 - 3486461 + g 72 -4.4 -4.77867 | opp_overlap 3486449 GGATGATGATTTACA TATTTT TTT AAAATA TTTTCTGTTCTATCT waaC 3487636 - 3486674 - | lipopolysaccharide heptosyltransferase 1 TERM 4491 3487497 - 3487485 - G 70 -9.1 -3.15841 | opp_overlap 3487479, overlap 3487483 ATAACGGTATCAACA GCTGG GTG CCAGC TTGGAATTTGCGCAA waaF 3488685 - 3487633 - | ADP-heptose--LPS heptosyltransferase II waaD 3489633 - 3488695 - | ADP-L-glycero-D-manno-heptose-6-epimerase kbl 3489901 - 3491100 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 4492 3491560 - 3491585 + G 87 -8.3 -4.58773 | ATTTTTGATCCCTTT GGTAACGCAGT ACAC ACGGCGTTATC TTTTGATTTAGTGGG TERM 4493 3491741 - 3491729 - g 79 -3.3 -5.40474 | overlap 3491730 ATCTGGCTAAAAAAA TGGGT GTC ACCCG TGCAGTCAATGTTAG TERM 4494 3491827 - 3491843 + G 77 -7.9 -4.2717 | opp_overlap 3491826 3491825, overlap 3491828 GTTGGATTAGAAATG TCCGGTG CGC CACCGGC TTTTCGTACCATGCT TERM 4495 3491828 - 3491842 + G 82 -11.4 -3.1582 | opp_overlap 3491826 3491825, overlap 3491827 TTGGATTAGAAATGT CCGGTG CGC CACCGG CTTTTCGTACCATGC tdh 3491110 - 3492135 + | L-threonine 3-dehydrogenase PMI3179 3493640 - 3492675 - | exported polysaccharide deacetylase TERM 4496 3492758 - 3492775 + g 90 -4.9 -5.63103 | opp_overlap 3492758 TTAATTTTTTAGTAA GTACTTT CATA AGAGTAC TTTTTTTCATTGAAA PMI3180 3494935 - 3493643 - | exported peptidase TERM 4497 3493717 - 3493703 - G 70 -7.8 -3.69618 | opp_overlap 3493703, overlap 3493701 TCTAATTTCAAAATA GAGCGC TGA ACGCTC TTGTCCACCACTGTT PMI3181 3496486 - 3495155 - | hypothetical protein TERM 4498 3495727 - 3495714 - G 71 -6.7 -4.011 | opp_overlap 3495714 GGAATATCTAAATAA GGCAA AATT TTGCC TTCTGCCATTAATGG TERM 4499 3495769 - 3495748 - G 79 -9.5 -3.74526 | CCATTAATGGAATAA CCTCATCCA CATG TGGATAAGG GTAAACATAATGTAA TERM 4500 3496929 - 3496942 + G 73 -2.3 -5.24129 | overlap 3496917 GGCGGTCATTGTATT GACCT TTAA AGGCC TTTTTTCTAAAACGA PMI3182 3496843 - 3497280 + | rhodanese-like protein secB 3497351 - 3497824 + | protein-export protein TERM 4501 3497846 - 3497870 + G 72 -8.5 -3.61536 | overlap 3497847 CTTCTATGACAGTTA TCGGTGCCG GTTCATA CGGCACCGC TTTAGCGATTACCTT TERM 4502 3497847 - 3497869 + G 81 -12 -2.7644 | overlap 3497846 TTCTATGACAGTTAT CGGTGCCG GTTCATA CGGCACCG CTTTAGCGATTACCT gpsA 3497824 - 3498837 + | glycerol-3-phosphate dehydrogenase (NAD(P)+) TERM 4503 3498923 - 3498904 - f 90 -10.8 -3.92659 | opp_overlap 3498904, overlap 3498898 GTTTGAAAATTCAAA GCCTAAGT ATTT ACTTAGGC TTTCGTGTAAAAAAT TERM 4504 3498904 - 3498923 + F 90 -10.8 -3.83205 | opp_overlap 3498898 3498904 GTTTGAAAATTCAAA GCCTAAGT ATTT ACTTAGGC TTTCGTGTAAAAAAT cysE 3498949 - 3499770 + | serine acetyltransferase PMI3186 3499773 - 3500327 + | serine acetyltransferase TERM 4505 3500375 - 3500353 - T 83 -5.7 -5.25803 | gap 1, opp_overlap 3500353 AAGGTTTATAAAAAA GGTGCTGAAT AAAT ATT-AGCACC TTTTTTAGTTTATAA TERM 4506 3500353 - 3500375 + T 86 -5.7 -5.42514 | gap 1, opp_overlap 3500353 AAGGTTTATAAAAAA GGTGCTGAAT AAAT ATT-AGCACC TTTTTTAGTTTATAA PMI3187 3500960 - 3500457 - | methyltransferase TERM 4507 3500902 - 3500883 - G 91 -12.2 -3.98816 | CAAATGAAGATGAAA GCCTGTGT TGGC ACACAGGC GGATAATATTACCCG wbnF 3501974 - 3500964 - | nucleotide sugar epimerase ugd 3503166 - 3502000 - | UDP-glucose 6-dehydrogenase TERM 4508 3502764 - 3502776 + g 70 -2.7 -5.02502 | opp_overlap 3502756, overlap 3502746 GAGAGAAGATAATAT TATCG GTA TGATA TTTTTCTCTCATCTG TERM 4509 3503010 - 3503042 + g 86 -2 -5.99154 | overlap 3502990 3503011 CTTTAGTAGCTAAAA ACTCTTCAATTTCT TTATC AGAGATAGGAGAGA TTTTTTTGTTTAATA cpsF 3504293 - 3503181 - | glycosyl transferase TERM 4510 3504328 - 3504349 + r 74 -5.3 -4.83246 | opp_overlap 3504328 AATTCCAGTATAGAA TCATATTTT TTCT AAAGTATGA TTTATTTCTTTATAA PMI3191 3505497 - 3504328 - | glycosyl transferase TERM 4511 3504863 - 3504873 + gr 100 -5.4 -5.86465 | AAGGTAATCATAATC TGTG AGT CACA TTTTTTTATATTATT TERM 4512 3505200 - 3505210 + gr 82 -4 -5.35721 | CAGTCATAATTATTT TACA ATA TGTA TTTTTCTTCTTGTGT TERM 4513 3505447 - 3505458 + gr 70 -7.2 -3.61774 | overlap 3505437 ATCATTAGTCACTTG GGCG CTAC CGCC TTTGAGACTATTATC wzy 3506662 - 3505472 - | O antigen polysaccharide unit polymerase TERM 4514 3506038 - 3506067 + gr 79 -3.1 -5.4659 | overlap 3506028 3506026 AGATAGAGAAAGAAA TTAATATAAGGAA AAGC TTTATTATATTAA TTTTTCTTTCTGTTA TERM 4515 3506622 - 3506604 - GR 74 -7.6 -3.77607 | opp_overlap 3506591, overlap 3506591 AATAATTTCATTAAA TTACTTTT ATA AAAAGTAA TAGGTAAAAAAAATA PMI3193 3507828 - 3506656 - | O antigen biosynthesis protein TERM 4516 3506694 - 3506704 + gr 75 -2.6 -5.19328 | TACCACACTTTTCTC TAAT AAT ATTA TTTTTGTTATCAAGT TERM 4517 3507524 - 3507551 + gr 72 -7.1 -3.81259 | opp_overlap 3507520 TCTATATTTAACATG TCACATACCAT AATTGC ATGGTAAGTGA TTTGGTGGCTTATAT PMI3194 3509018 - 3507798 - | flippase TERM 4518 3508553 - 3508514 - GR 82 -3.8 -5.52023 | opp_overlap 3508527, overlap 3508517 3508519 ATGATGAATAAAAAA TAAGATTTAAAAGTAGCA ATCC TGCTATTTTTAAATAGTA CACAAGAGGAAATAT TERM 4519 3508550 - 3508517 - GR 75 -5.5 -4.82661 | opp_overlap 3508527, overlap 3508514 3508519 ATGAATAAAAAATAA GATTTAAAAGTAGCA ATCC TGCTATTTTTAAATA GTACACAAGAGGAAA TERM 4520 3508548 - 3508519 - GR 79 -8.1 -4.00001 | opp_overlap 3508527, overlap 3508517 3508514 GAATAAAAAATAAGA TTTAAAAGTAGCA ATCC TGCTATTTTTAAA TAGTACACAAGAGGA TERM 4521 3508527 - 3508540 + gr 74 -5.3 -4.68593 | opp_overlap 3508519 3508517 3508514 AATAAGATTTAAAAG TAGCA ATCC TGCTA TTTTTAAATAGTACA PMI3195 3509800 - 3509018 - | glycosyl transferase TERM 4522 3510851 - 3510861 + G 71 -4 -4.91109 | GCTGCGGGATTAATT TTTG GAA CAAA TTTTTATCATCCAAC PMI3196 3510410 - 3511399 + | glycosyl transferase TERM 4523 3511424 - 3511383 - T 71 -5.6 -4.63863 | gap 3, opp_overlap 3511396, overlap 3511396 TTAATAGAAAAATAA TTAAGTCCATAAACTAAGGGG ATT CCCCTTAGTTTA---ACTTAA GATAGTTGCCAAAAA TERM 4524 3511396 - 3511414 + T 100 -13.2 -3.76125 | opp_overlap 3511383 3511396 AATTAAGTCCATAAA CTAAGGGG ATT CCCCTTAG TTTAACTTAAGATAG TERM 4525 3511414 - 3511396 - T 100 -13.2 -3.93638 | opp_overlap 3511396, overlap 3511383 AATTAAGTCCATAAA CTAAGGGG ATT CCCCTTAG TTTAACTTAAGATAG PMI3197 3512304 - 3511411 - | O antigen biosynthesis protein cpxA 3513741 - 3512374 - | two-component system sensor kinase cpxR 3514452 - 3513754 - | two component system response regulator cpxP 3514636 - 3515202 + | periplasmic protein TERM 4526 3515322 - 3515339 + F 100 -12.7 -5.9663 | TCCCTGTCTTTTGCA GCCCCTC TGGA GAGGGGC TTTTTTTTGCTCTTT PMI3201 3515773 - 3516084 + | DNA-binding protein TERM 4527 3516117 - 3516134 + T 100 -6.9 -5.91981 | opp_overlap 3516114 3516118, overlap 3516118 ATAACTGAATAATTA ACCCCTC TGGA GAGGGGC TTTTTTTTGCGTTTT TERM 4528 3516118 - 3516133 + T 91 -10.4 -4.11528 | opp_overlap 3516114 3516118, overlap 3516117 TAACTGAATAATTAA CCCCTC TGGA GAGGGG CTTTTTTTTGCGTTT TERM 4529 3516133 - 3516118 - T 85 -10.4 -3.55973 | opp_overlap 3516118 3516117, overlap 3516114 TAACTGAATAATTAA CCCCTC TGGA GAGGGG CTTTTTTTTGCGTTT PMI3202 3516985 - 3516230 - | probable short chain dehydrogenase pfkA 3517519 - 3518496 + | 6-phosphofructokinase TERM 4530 3518677 - 3518699 + F 78 -2.1 -5.72254 | gap 1, opp_overlap 3518679, overlap 3518679 3518680 GTTTTCTCAACTATA TAG-CTGTTA CGTA TAACAGTCTG TTTTTTATTATTTCA sbp 3518791 - 3519795 + | sulfate-binding protein (sulfate starvation-induced protein) TERM 4531 3519843 - 3519815 - T 100 -6.9 -5.66684 | gap 1, opp_overlap 3519815 TAACGCATAAAAAAA TCACCTT-CTGT TAAGAC ACAGTAAGGTGA TTTTCGCGATAGTTA TERM 4532 3519815 - 3519843 + T 71 -6.9 -4.12902 | gap 1, opp_overlap 3519815 TAACGCATAAAAAAA TCACCTT-CTGT TAAGAC ACAGTAAGGTGA TTTTCGCGATAGTTA tpiA 3520661 - 3519891 - | triosephosphate isomerase PMI3206 3521403 - 3520768 - | hypothetical protein TERM 4533 3521265 - 3521253 - G 71 -4.8 -4.56597 | opp_overlap 3521253 TGGTGGTTTCAAAAA CAGG GGCAT CCTG TTTAAGGTAAAGAAT PMI3207 3521515 - 3521943 + | hypothetical protein TERM 4534 3521961 - 3521997 + T 100 -13.3 -3.51329 | gap 1, opp_overlap 3521961 3521964 3521979, overlap 3521964 TGTGTAACTGCTAAA CAGTCAGGGCTGAATA AAGTGC TATTCAGCCCTGA-TG TTATCATTACCAATA TERM 4535 3521997 - 3521961 - T 100 -14 -3.60792 | gap 1, opp_overlap 3521961 3521964, overlap 3521964 3521979 TGTGTAACTGCTAAA CAGTCAGGGCTGAATAA AGTG CTATTCAGCCCTGA-TG TTATCATTACCAATA TERM 4536 3521964 - 3521995 + T 100 -16.1 -3.32946 | opp_overlap 3521961 3521964 3521979, overlap 3521961 GTAACTGCTAAACAG TCAGGGCTGAATA AAGTGC TATTCAGCCCTGA TGTTATCATTACCAA TERM 4537 3521995 - 3521964 - T 100 -16.8 -2.62667 | opp_overlap 3521964 3521961, overlap 3521961 3521979 GTAACTGCTAAACAG TCAGGGCTGAATAA AGTG CTATTCAGCCCTGA TGTTATCATTACCAA fpr 3522750 - 3522004 - | ferredoxin--NADP reductase TERM 4538 3523342 - 3523359 + G 74 -4.1 -5.00884 | TGAGTATTTTCTGTT TAGCGAC GATC GTGGCTA TTTTTTCACAGAACT TERM 4539 3523708 - 3523720 + G 78 -4.1 -5.2112 | overlap 3523696 TATTGCTGTCCAACA GTACT TTT AGTGC TTTTTTGATCATGTT emrD 3523089 - 3524273 + | multidrug resistance protein D (MFS-family transporter) TERM 4540 3524331 - 3524304 - T 100 -10 -5.06414 | opp_overlap 3524304 TTTCGCCAATAAAAA TGCCGATAGT GTATACCT ACTATCGGCA TTTGTTTTATGTCGC TERM 4541 3524304 - 3524331 + T 100 -10.7 -4.83243 | opp_overlap 3524304 TTTCGCCAATAAAAA TGCCGATAGTG TATACC TACTATCGGCA TTTGTTTTATGTCGC TERM 4542 3524342 - 3524355 + T 75 -8.1 -3.61902 | CGGCATTTGTTTTAT GTCGC CTAG GCGAC TTCTCTCTCATAGGG glpK 3525915 - 3524383 - | glycerol kinase TERM 4543 3524410 - 3524421 + g 86 -7.2 -5.01732 | TTCCCATTCTTGTGC GCGG GCAA CCGC TTTTTTCCAGCCGTT TERM 4544 3524872 - 3524862 - G 71 -6.8 -4.0942 | opp_overlap 3524862 CAGGTACGACATAAA CACC GTT GGTG TCATTAACTTTAGTG glpF 3526773 - 3525958 - | glycerol uptake facilitator protein TERM 4545 3526070 - 3526038 - G 79 -8.5 -4.08692 | overlap 3526041 CAAGTGCGCCTAAAA TACCCCCAATCATTG GAG CAATGAGTGGGACTA AGAAATAAGGAATAT TERM 4546 3526067 - 3526041 - G 73 -10.2 -2.78032 | overlap 3526038 GTGCGCCTAAAATAC CCCCAATCATTG GAG CAATGAGTGGGA CTAAGAAATAAGGAA TERM 4547 3527185 - 3527171 - g 75 -2.8 -5.28983 | overlap 3527174 GCTAAAAGAGAAAAA TGATGC ACT GAATCA AGAAGTGCAGGGCGC PMI3212 3527070 - 3527312 + | hypothetical protein TERM 4548 3527344 - 3527360 + T 85 -8 -4.52803 | opp_overlap 3527344, overlap 3527350 3527352 3527356 CCAGTTAAAAACAAA GCCACT GATAA AGTGGC TTTTGTCGCTTTATG TERM 4549 3527360 - 3527344 - T 90 -8 -4.89063 | opp_overlap 3527344 3527350 3527352 3527356 CCAGTTAAAAACAAA GCCACT GATAA AGTGGC TTTTGTCGCTTTATG rraA 3527924 - 3527406 - | regulator of ribonuclease activity TERM 4550 3528012 - 3527989 - R 100 -14 -4.07568 | GGGGTGTTGGCAAAA GACTCACTGA CAAT TCAGTGAGTC AAATCAACAATAGCG menA 3528950 - 3528033 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 4551 3528673 - 3528686 + g 84 -8.1 -4.74103 | TTTTTCATTTGAGCA GGGGT GATA ACCCC TTTTTGCATTCCACG TERM 4552 3528876 - 3528889 + g 73 -6.7 -4.21194 | opp_overlap 3528876 CACAATAGCAATTAA CCCTA AAGG TAGGG TTTTGGGTCGTAAAC TERM 4553 3529013 - 3528996 - R 100 -11.3 -4.36508 | opp_overlap 3528995 3528994, overlap 3528990 TTATAAAAATAAGAA TGGGAGG CAAG CCTCCCA CGTTAATATTGCTGA hslU 3530389 - 3529049 - | ATP-dependent Hsl protease, ATP-binding subunit hslV 3530932 - 3530402 - | ATP-dependent protease HslV (heat shock protein) ftsN 3531837 - 3531043 - | cell division protein TERM 4554 3531644 - 3531663 + g 80 -2.1 -5.56673 | opp_overlap 3531660, overlap 3531647 3531650 TGCCCTGCACTTGAT GACGTTG GTTCGA CAACCTC TTTTTTATTATGGGT TERM 4555 3531691 - 3531660 - G 77 -10.4 -3.28791 | opp_overlap 3531650 3531644, overlap 3531690 ACGTTGGTTCGACAA CCTCTTTTTTATTA TGGG TAATAAAATAGAGG CCGCCAACAAATAGC cytR 3532939 - 3531908 - | LacI-family transcriptional regulator TERM 4556 3532717 - 3532731 + g 75 -5.7 -4.7078 | CACTGATGTTAGGGA CGATC ACGAG GATCG TTTTTGACTCGTTAC priA 3535393 - 3533192 - | primosomal protein n' rpmE 3535597 - 3535809 + | 50S ribosomal protein L31 TERM 4557 3535896 - 3535875 - T 93 -10.2 -4.25681 | opp_overlap 3535875 ACGGAATTGAAGAAA GCCCAAAG TATTTG CTTTGGGC TTTTTGTTATTCTTT TERM 4558 3535875 - 3535896 + T 100 -10.9 -5.40014 | opp_overlap 3535875 ACGGAATTGAAGAAA GCCCAAAGT ATTT GCTTTGGGC TTTTTGTTATTCTTT TERM 4559 3536708 - 3536741 + T 71 -6.7 -4.1193 | opp_overlap 3536709 3536710 3536714, overlap 3536703 3536711 3536714 TAGAGTAATGCACAA ATTGAAGCCCAAAGT GTTG GCTTTGGGCTTCTGG TTATATTTTTGCTAT TERM 4560 3536740 - 3536709 - T 74 -7.3 -3.99228 | opp_overlap 3536708 3536703 3536711 3536714, overlap 3536710 3536714 AGAGTAATGCACAAA TTGAAGCCCAAAG TGTTGG CTTTGGGCTTCTG GTTATATTTTTGCTA TERM 4561 3536739 - 3536710 - T 84 -10.8 -2.98814 | opp_overlap 3536708 3536703 3536711 3536714, overlap 3536709 3536714 GAGTAATGCACAAAT TGAAGCCCAAAG TGTTGG CTTTGGGCTTCT GGTTATATTTTTGCT TERM 4562 3536711 - 3536738 + T 100 -15 -3.06384 | opp_overlap 3536710 3536709 3536714, overlap 3536708 3536703 3536714 AGTAATGCACAAATT GAAGCCCAAAGT GTTG GCTTTGGGCTTC TGGTTATATTTTTGC TERM 4563 3536714 - 3536735 + T 89 -10.9 -3.6372 | opp_overlap 3536710 3536709 3536714, overlap 3536711 3536708 3536703 AATGCACAAATTGAA GCCCAAAGT GTTG GCTTTGGGC TTCTGGTTATATTTT TERM 4564 3536735 - 3536714 - T 82 -10.2 -3.34113 | opp_overlap 3536714 3536711 3536708 3536703, overlap 3536710 3536709 AATGCACAAATTGAA GCCCAAAG TGTTGG CTTTGGGC TTCTGGTTATATTTT metJ 3537090 - 3536773 - | repressor of the methionine regulon TERM 4565 3536988 - 3537017 + g 83 -3.1 -5.57054 | gap 1, overlap 3536992 CATCTGTCAAAATTT TTAGCACTTTCAAT GGG ATTGAAACTG-TAA TTTTTTTGACTTGTT TERM 4566 3538295 - 3538314 + G 72 -3.6 -5.06585 | TTGAGTTAAAAGGGG GGATTGAA GCAA TTAAATCC TTTTTATCTCATTTA metB 3537376 - 3538536 + | cystathionine gamma-synthase metL 3538546 - 3540984 + | bifunctional aspartokinase/homoserine dehydrogenase II [includes: aspartokinase II and homoserine dehydrogenase II] TERM 4567 3541010 - 3541037 + F 74 -5.7 -4.7189 | overlap 3541005 TCTTTTTAATCAAAA CTATCAGTGAT TTTTTT ATTGCTGATAG TTTTCTGTGTATTTT TERM 4568 3541329 - 3541345 + G 71 -5.2 -4.65078 | TTGATAATGGTTATT TTCTCA GGTTA TGAGAA TTTTATTACCAATAT TERM 4569 3541506 - 3541496 - g 74 -4 -5.09895 | TATGGACTTAAAAAA TATC CCC GATA ACAAGTTATTATGGT PMI3225 3541107 - 3541625 + | hypothetical protein PMI3226 3541704 - 3541865 + | hypothetical protein TERM 4570 3541887 - 3541906 + F 100 -10.7 -4.78848 | opp_overlap 3541887 TATTTGTTAACACAA GGCGCTG CATAGT CAGCGCC TTTTCTATTTAAGGG TERM 4571 3541906 - 3541887 - f 87 -10.7 -3.66288 | opp_overlap 3541887 TATTTGTTAACACAA GGCGCTG CATAGT CAGCGCC TTTTCTATTTAAGGG TERM 4572 3542060 - 3542038 - f 72 -3.5 -5.14563 | overlap 3542039 CTTTCTAGTAAAAAA CGCTTCTTA GACGA TAAGAAACA AAAAAATGTCCTTAT ppc 3542338 - 3544974 + | phosphoenolpyruvate carboxylase TERM 4573 3544998 - 3545033 + T 100 -12.8 -4.34482 | opp_overlap 3545006, overlap 3545006 ATAGGGTTATTTTAT TAGTAAAACAGCGCTA AATT TAGCGCTGTTTTTTTA TCTTTTTTTCCAACG TERM 4574 3545006 - 3545025 + T 100 -12.2 -5.9667 | opp_overlap 3545006, overlap 3544998 ATTTTATTAGTAAAA CAGCGCTA AATT TAGCGCTG TTTTTTTATCTTTTT TERM 4575 3545025 - 3545006 - T 100 -12.2 -4.30844 | opp_overlap 3545006 3544998 ATTTTATTAGTAAAA CAGCGCTA AATT TAGCGCTG TTTTTTTATCTTTTT PMI3228 3546014 - 3545031 - | glycosyl transferase phrB 3547484 - 3546054 - | deoxyribodipyrimidine photolyase TERM 4576 3547115 - 3547127 + g 83 -4.9 -5.25803 | TGGTGTTATGGGCGA GTAAT TCC ATTAC TTTTTTATCACGGTT proP 3548997 - 3547495 - | proline/betaine transporter (MFS-family transporter) TERM 4577 3550210 - 3550185 - g 72 -3.2 -5.1361 | opp_overlap 3550193 AGAAATGGTAAAAAA TGGCGATGTC GATTTT GCCATTGCCA CAGAATCGATGCATT cysB 3549766 - 3550779 + | cys regulon transcriptional activator ( LysR-family transcriptional regulator) TERM 4578 3550836 - 3550808 - T 100 -12.6 -4.75372 | gap 1, opp_overlap 3550798, overlap 3550797 ATGAGGGACTAAAAA GCCCG-TTTTTGC GGGG GCAAAAAACGGGC TTAGGGCAGAATAAG PMI3232 3552036 - 3550855 - | amidohydrolase/metallopeptidase PMI3233 3552485 - 3552036 - | hypothetical protein PMI3234 3553303 - 3552482 - | hypothetical protein TERM 4579 3553067 - 3553078 + g 74 -4.4 -4.99035 | TACCATTTTACCGCA GAAG CCTT CTTC TTTTTCTGTAAATAA TERM 4580 3554775 - 3554790 + G 73 -5.4 -4.65078 | opp_overlap 3554760 GCATTGGCTCACATT GCCATG TGGA TATGGC TTTTGTTGGAGATGT poxB 3553868 - 3555592 + | pyruvate dehydrogenase [cytochrome] TERM 4581 3555617 - 3555655 + T 100 -14.1 -3.57792 | gap 2, opp_overlap 3555609 3555608 GCATAATCGTTATAT TGCGAGTTGCAGG--GGCT AAT AGCCTACCTGCAACTTGCA TTTCAACATAAGTCG argE 3556847 - 3555684 - | acetylornithine deacetylase argC 3556948 - 3557952 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 3557973 - 3558746 + | acetylglutamate kinase TERM 4582 3559572 - 3559560 - g 73 -7.7 -3.84825 | TTTAGCTACATTAAA TACGC TAG GCGTA AAACACGGTATTGGT argG 3558811 - 3560022 + | argininosuccinate synthase argH 3560115 - 3561497 + | argininosuccinate lyase TERM 4583 3561562 - 3561537 - f 84 -5.3 -5.48825 | opp_overlap 3561537 GATTATTCAAAAAAA GCAGGGTGGCT CATG AACTGCCCTGC TTTTTTATGGACGCT TERM 4584 3561537 - 3561562 + F 91 -7.5 -5.24531 | opp_overlap 3561537 GATTATTCAAAAAAA GCAGGGTGGCT CATG AACTGCCCTGC TTTTTTATGGACGCT oxyR 3561732 - 3562649 + | hydrogen peroxide-inducible genes activator (LysR-family transcriptional regulator) sthA 3564038 - 3562641 - | soluble pyridine nucleotide transhydrogenase PMI3243 3564239 - 3564919 + | TetR-family transcriptional regulatory PMI3244 3564919 - 3565320 + | hypothetical protein TERM 4585 3565361 - 3565384 + T 100 -14 -5.42605 | opp_overlap 3565366 ACAGCGAGATTTTGA CACCAGTAAG TGCA CTTACTGGTG TTTTGTTTTTATTGG trmA 3566539 - 3565442 - | tRNA (uracil-5)-methyltransferase btuB 3566925 - 3568778 + | vitamin B12 transporter (TonB-dependent receptor) murI 3568723 - 3569589 + | glutamate racemase TERM 4586 3571496 - 3571513 + F 74 -9.1 -3.07291 | opp_overlap 3571496 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 4587 3572182 - 3572196 + F 71 -8.6 -2.92371 | opp_overlap 3572179 3572182 GAATGGGGAAACCCA GTATCC AAT GGATAC TATCATTAACTGAAT TERM 4588 3572545 - 3572533 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 4589 3573516 - 3573498 - f 87 -10.3 -3.57798 | overlap 3573511 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 4590 3575443 - 3575427 - f 82 -10.9 -2.62616 | overlap 3575429 TCAGTTGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCCCCAGTTCGA TERM 4591 3575648 - 3575691 + F 100 -7.6 -5.52807 | gap 1, opp_overlap 3575660, overlap 3575653 3575660 CTGCTAAGCATTAAA TAAG-ACGAGAAAGCCAACCC AAT GGGTTGGCTTTTTTGCATTTG TTTTTCTTTATTCTT TERM 4592 3575653 - 3575685 + F 100 -17.9 -2.76771 | opp_overlap 3575660, overlap 3575648 3575660 AAGCATTAAATAAGA CGAGAAAGCCAACCC AAT GGGTTGGCTTTTTTG CATTTGTTTTTCTTT TERM 4593 3575678 - 3575660 - f 100 -14.6 -4.11081 | opp_overlap 3575653 3575648 3575660 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCATTTGTT TERM 4594 3575660 - 3575678 + F 100 -14.6 -5.25805 | opp_overlap 3575660, overlap 3575653 3575648 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCATTTGTT murB 3575840 - 3576874 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 3576871 - 3577833 + | BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase] coaA 3578913 - 3577966 - | pantothenate kinase TERM 4595 3579915 - 3579902 - g 78 -3.9 -5.27938 | ATGTCTAAAGAAAAA TTTGA ACGT TCAAA ACCGCACGTTAACGT tufB 3579887 - 3581071 + | elongation factor Tu TERM 4596 3581114 - 3581097 - f 100 -11.3 -4.10161 | opp_overlap 3581097 TATTATTTTTGAAAA GGGCATC TGAT GATGCCC TTTTTTAGTTTATGC TERM 4597 3581097 - 3581114 + F 100 -11.3 -5.42514 | opp_overlap 3581097 TATTATTTTTGAAAA GGGCATC TGAT GATGCCC TTTTTTAGTTTATGC bfd 3581274 - 3581471 + | bacterioferritin-associated ferredoxin bfr 3581549 - 3582022 + | bacterioferritin TERM 4598 3582082 - 3582120 + F 100 -9.9 -5.16572 | gap 1, opp_overlap 3582087, overlap 3582086 3582087 TATCTATCGAATTTA TAAAA-GCAAAGGTAACG CTAT TGTTGCCTTTGCCTTTTA TTTTTTAAGTTCAAT TERM 4599 3582086 - 3582115 + F 100 -7.9 -5.43553 | opp_overlap 3582087, overlap 3582082 3582087 TATCGAATTTATAAA AGCAAAGGTAACG CTAT TGTTGCCTTTGCC TTTTATTTTTTAAGT TERM 4600 3582087 - 3582114 + F 95 -11.4 -3.83692 | opp_overlap 3582087, overlap 3582086 3582082 ATCGAATTTATAAAA GCAAAGGTAACG CTAT TGTTGCCTTTGC CTTTTATTTTTTAAG TERM 4601 3582114 - 3582087 - f 88 -8.5 -4.47551 | opp_overlap 3582087 3582086 3582082 ATCGAATTTATAAAA GCAAAGGTAAC GCTATT GTTGCCTTTGC CTTTTATTTTTTAAG TERM 4602 3582242 - 3582255 + F 78 -2.3 -5.83226 | AGTGGGGCTGATTTA TCAGC TAAT GCAGA TTTTTTTATTGCATT rpsJ 3582388 - 3582699 + | 30S ribosomal protein S10 rplC 3582732 - 3583361 + | 50S ribosomal protein L3 TERM 4603 3583410 - 3583398 - g 79 -10.5 -3.54414 | opp_overlap 3583392, overlap 3583396 ATTGGTAATGAAAGA CGCGC AAG GCGCG CTGACTGTTTCCGAA rplD 3583378 - 3583983 + | 50S ribosomal protein L4 rplW 3583980 - 3584282 + | 50S ribosomal protein L23 rplB 3584302 - 3585126 + | 50S ribosomal protein L2 rpsS 3585141 - 3585419 + | 30S ribosomal protein S19 rplV 3585434 - 3585766 + | 50S ribosomal protein L22 TERM 4604 3586057 - 3586042 - g 70 -3.2 -4.91459 | opp_overlap 3586053, overlap 3586043 GAAGATGTAGAAAAA CTGCGT AAAA ACGTAG CGGATATCGCTGGCG rpsC 3585784 - 3586485 + | 30S ribosomal protein S3 rplP 3586498 - 3586908 + | 50S ribosomal protein L16 rpmC 3586908 - 3587099 + | 50S ribosomal protein L29 rpsQ 3587099 - 3587353 + | 30S ribosomal protein S17 TERM 4605 3587377 - 3587406 + F 100 -8 -5.38047 | opp_overlap 3587377 3587381 CCTTTTCGTACGAAA TAAACGGCTC AAAACTGAAC GAGCCGTTTA TTTTTTCTGTCCATA TERM 4606 3587406 - 3587377 - f 77 -8.7 -3.72576 | opp_overlap 3587377, overlap 3587381 CCTTTTCGTACGAAA TAAACGGCTCA AAACTGAA CGAGCCGTTTA TTTTTTCTGTCCATA rplN 3587530 - 3587901 + | 50S ribosomal protein L14 rplX 3587912 - 3588226 + | 50S ribosomal protein L24 TERM 4607 3588402 - 3588384 - g 90 -7.4 -5.24531 | opp_overlap 3588383 ATTGCTGATAAAAAA CTGCTGGA TAA TGCAGCAG CTGATTTAGCAGCAA rplE 3588240 - 3588779 + | 50S ribosomal protein L5 rpsN 3588792 - 3589097 + | 30S ribosomal protein S14 rpsH 3589130 - 3589522 + | 30S ribosomal protein S8 rplF 3589537 - 3590070 + | 50S ribosomal protein L6 rplR 3590080 - 3590433 + | 50S ribosomal protein L18 TERM 4608 3590683 - 3590665 - g 78 -7.4 -4.4261 | opp_overlap 3590665, overlap 3590682 GTCGCAATATGAAAA CCGTCGCT TTA AACAACGG TACTCTGTTCCACCC rpsE 3590448 - 3590948 + | 30S ribosomal protein S5 rpmD 3590954 - 3591133 + | 50S ribosomal protein L30 TERM 4609 3591320 - 3591330 + G 70 -5.4 -4.42238 | TTATACCGTCGTTTA CCAA AAT TTGG TTTTACTTCACGTAA rplO 3591137 - 3591571 + | 50S ribosomal protein L15 secY 3591579 - 3592901 + | preprotein translocase SecY subunit rpmJ 3592946 - 3593062 + | 50S ribosomal protein L36 TERM 4610 3593090 - 3593122 + F 100 -11.3 -3.99324 | opp_overlap 3593088 3593087, overlap 3593091 3593093 TTTTCTTGCAAAGTT CGGTTGAGCTGGCTA AAT TAGCCAGCCCAATCA TTTATAATCATACAG TERM 4611 3593091 - 3593121 + F 100 -14.8 -2.99273 | opp_overlap 3593088 3593087, overlap 3593090 3593093 TTTCTTGCAAAGTTC GGTTGAGCTGGCTA AAT TAGCCAGCCCAATC ATTTATAATCATACA TERM 4612 3593093 - 3593119 + F 100 -13.8 -3.04836 | opp_overlap 3593088 3593087, overlap 3593091 3593090 TCTTGCAAAGTTCGG TTGAGCTGGCTA AAT TAGCCAGCCCAA TCATTTATAATCATA rpsM 3593207 - 3593563 + | 30S ribosomal protein S13 TERM 4613 3593851 - 3593841 - g 73 -6.8 -4.15453 | overlap 3593842 3593844 GAAGTTATGGTAAAA GGAC CTG GTCC TGGTCGTGAGTCAAC rpsK 3593580 - 3593969 + | 30S ribosomal protein S11 TERM 4614 3594516 - 3594506 - g 73 -6.8 -4.14472 | overlap 3594507 TGAACAGCGTGAAAA GCCA ACA TGGC TGGAAGTTGATGCTG rpsD 3594006 - 3594626 + | 30S ribosomal protein S4 rpoA 3594652 - 3595641 + | DNA-directed RNA polymerase alpha chain rplQ 3595679 - 3596065 + | 50S ribosomal protein L17 TERM 4615 3596084 - 3596130 + F 95 -12.7 -2.53263 | gap 1, opp_overlap 3596051 3596074 3596071 3596086 3596097 3596099, overlap 3596099 3596121 AATTATTATTCAGCG AAGCGAATAAAAAGACCGGATT TTTT AATCCGGTTTTTTTATT-GCTA TAGATTAGCAATAAA TERM 4616 3596128 - 3596086 - f 100 -13.1 -3.08464 | gap 1, opp_overlap 3596084 3596099 3596121, overlap 3596051 3596074 3596071 3596097 3596099 TTATTATTCAGCGAA GCGAATAAAAAGACCGGATT TTTT AATCCGGTTTTTTTATT-GC TATAGATTAGCAATA TERM 4617 3596118 - 3596097 - f 91 -7.3 -5.13741 | opp_overlap 3596084 3596099, overlap 3596086 3596099 CGAAGCGAATAAAAA GACCGGATT TTTT AATCCGGTT TTTTTATTGCTATAG TERM 4618 3596099 - 3596116 + F 100 -9.9 -5.85737 | opp_overlap 3596097 3596086 3596099, overlap 3596084 AAGCGAATAAAAAGA CCGGATT TTTT AATCCGG TTTTTTTATTGCTAT TERM 4619 3596116 - 3596099 - f 93 -9.9 -4.18817 | opp_overlap 3596099 3596084, overlap 3596097 3596086 AAGCGAATAAAAAGA CCGGATT TTTT AATCCGG TTTTTTTATTGCTAT TERM 4620 3596121 - 3596145 + F 79 -8.8 -3.93864 | opp_overlap 3596086 3596138 3596142, overlap 3596084 3596142 TTTTAATCCGGTTTT TTTATTGCTA TAGAT TAGCAATAAA TTTAAATTTATTGGT zntR 3596328 - 3596741 + | Zn(II)-responsive regulator of zntA (MerR-family transcriptional regulator) TERM 4621 3596954 - 3597005 + G 100 -16.9 -5.65496 | opp_overlap 3596954 TAATAAGAAAGGTAA CTGGGAGGCCAGTGATAACAAAT ATTTTC AATTGTTATCACTGGCCTTTTAG TTTTTATTTTTGCTG TERM 4622 3597005 - 3596954 - g 80 -11 -3.41554 | opp_overlap 3596954 TAATAAGAAAGGTAA CTGGGAGGCCAGTGATAACAAATA TTTT CAATTGTTATCACTGGCCTTTTAG TTTTTATTTTTGCTG PMI3283 3596802 - 3597005 + | hypothetical protein mscL 3597416 - 3597009 - | large-conductance mechanosensitive channel trkA 3598899 - 3597523 - | trk system potassium uptake protein TERM 4623 3598077 - 3598063 - G 71 -5 -4.4891 | TGCATCACCATAAAA CACGAT AGT ATCATG GAGGAGCTCTGCTAA TERM 4624 3598963 - 3598930 - R 80 -7.6 -4.25056 | opp_overlap 3598932 3598935, overlap 3598932 TATTCGATTAACAAA TACAAGATCAATGT CTGTTC ACATCGATCTTGTG TTGGAATAGTAGCTT TERM 4625 3598932 - 3598961 + r 70 -8 -3.07043 | opp_overlap 3598930 3598932, overlap 3598935 TTCGATTAACAAATA CAAGATCAATGT CTGTTC ACATCGATCTTG TGTTGGAATAGTAGC TERM 4626 3598961 - 3598932 - R 86 -10.2 -3.72374 | opp_overlap 3598932 3598935, overlap 3598930 TTCGATTAACAAATA CAAGATCAATGT CTGTTC ACATCGATCTTG TGTTGGAATAGTAGC rsmB 3600280 - 3599012 - | ribosomal RNA small subunit methyltransferase B TERM 4627 3600140 - 3600157 + g 70 -5.5 -4.43283 | opp_overlap 3600132 3600142, overlap 3600142 TAAGGTACCAAAGCA GAGCTCT TGCA AGAGCGC TTTGTCTTTATCTGA TERM 4628 3600371 - 3600338 - R 89 -7.5 -5.00884 | opp_overlap 3600338 3600341, overlap 3600339 3600341 ATTGGCGTGAAAAAA GGACCCCCTGAAATA TTGT TATTTCAAGGGGTAG TATCATTATTGAATG TERM 4629 3600370 - 3600339 - R 89 -11 -3.60048 | opp_overlap 3600338 3600341, overlap 3600338 3600341 TTGGCGTGAAAAAAG GACCCCCTGAAATA TTGT TATTTCAAGGGGTA GTATCATTATTGAAT TERM 4630 3600368 - 3600341 - R 100 -13.6 -3.37655 | opp_overlap 3600338 3600341, overlap 3600339 3600338 GGCGTGAAAAAAGGA CCCCCTGAAATA TTGT TATTTCAAGGGG TAGTATCATTATTGA TERM 4631 3600341 - 3600368 + r 86 -11.4 -2.73221 | opp_overlap 3600341 3600339 3600338, overlap 3600338 GGCGTGAAAAAAGGA CCCCCTGAAATA TTGT TATTTCAAGGGG TAGTATCATTATTGA fmt 3601327 - 3600377 - | methionyl-tRNA formyltransferase fms 3601869 - 3601354 - | polypeptide deformylase smf 3602001 - 3603161 + | hypothetical protein PMI3290 3603180 - 3603737 + | DNA-binding protein PMI3291 3603730 - 3604299 + | RNA-binding protein aroE 3604307 - 3605131 + | shikimate dehydrogenase PMI3293 3605128 - 3605391 + | hypothetical protein TERM 4632 3605367 - 3605409 + T 70 -7.2 -3.70919 | overlap 3605370 AACTCTTCATCCATT TTACTGTTTATCAATGGC GGAATGA GCCGTTGATAAATAGTCG TTCTTCCACTTTACG TERM 4633 3605370 - 3605406 + T 83 -11.1 -2.95161 | overlap 3605367 TCTTCATCCATTTTA CTGTTTATCAATGGC GGAATGA GCCGTTGATAAATAG TCGTTCTTCCACTTT PMI3294 3605930 - 3605367 - | transferase TERM 4634 3606325 - 3606314 - R 81 -3 -5.8901 | opp_overlap 3606314, overlap 3606302 AGAGAAAAGAAAAAA GTTT GAAA AAAC TCTTGACTCTTCAGA TERM 4635 3608071 - 3608088 + r 74 -9.1 -3.07291 | opp_overlap 3608071 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 4636 3608351 - 3608333 - R 77 -4.6 -5.27335 | overlap 3608334 TTGCCTAAAGAAAAA GCTTCTTA TTA TAAGAAGA AAAAGGAGTGGTTAT TERM 4637 3608350 - 3608334 - R 75 -8.1 -3.75678 | overlap 3608333 TGCCTAAAGAAAAAG CTTCTTA TTA TAAGAAG AAAAAGGAGTGGTTA TERM 4638 3608592 - 3608568 - R 70 -4.4 -4.75954 | opp_overlap 3608564 AAAATTGAAAACAAA TCAATATATC ACCGA GGTATATTGA TGAGTCTCTCAAAAT TERM 4639 3608929 - 3608943 + r 71 -8.6 -2.92371 | opp_overlap 3608929 3608926 GAATGGGGAAACCCA GTATCC AAT GGATAC TATCATTAACTGAAT TERM 4640 3609292 - 3609280 - R 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 4641 3610089 - 3610071 - R 87 -10.3 -3.57798 | overlap 3610084 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 4642 3612183 - 3612202 + r 100 -12.2 -5.24796 | TTATACTACTTTGTA GCCCAGTT AATT AACTGGGC TTTTTGTTATATAAA hdfR 3613237 - 3612413 - | H-NS-depdendent flhDC regulator (LysR-family transcriptional regulator) TERM 4643 3612924 - 3612907 - G 70 -9.9 -2.60075 | opp_overlap 3612907, overlap 3612906 TTCTTTCTAAGTAAG CCTCTTG TAGC CAAGAGG TTAGATAAGCGTCCC TERM 4644 3612907 - 3612924 + g 72 -9.9 -3.06183 | opp_overlap 3612907 3612906 TTCTTTCTAAGTAAG CCTCTTG TAGC CAAGAGG TTAGATAAGCGTCCC TERM 4645 3613106 - 3613116 + g 71 -6.8 -4.0616 | overlap 3613097 AGTAAACAAATTTGT CCCA AGT TGGG TTTCTAATTGGCGTA TERM 4646 3613618 - 3613582 - g 82 -3.8 -5.4505 | CTGTTGAAGAAAAAA TTTGGAAGAAATATAC CAGTC GTATAAGTCGTCCAAA ACGTTTTCATACCTT PMI3296 3613353 - 3613691 + | hypothetical protein TERM 4647 3613681 - 3613700 + T 74 -5.8 -4.54727 | ATGACTATACCGATT CTGATGAT TAAT ATCATTAG TTTTAATTTAAAAGG TERM 4648 3613714 - 3613730 + T 91 -7.2 -5.27477 | opp_overlap 3613714 AGTTTTAATTTAAAA GGGGCG TATTT CGCTCC TTTTTTACTTACCCT PMI3297 3615271 - 3613739 - | magnesium-chelatase TERM 4649 3614640 - 3614659 + g 83 -9.3 -4.01369 | overlap 3614638 ATGTTGTGATTTCCT GCTGCAG TGATTT CTGCAGC TCTTTTTGCGTTATT ilvL 3615716 - 3615817 + | ilvGMEDA operon leader peptide TERM 4650 3615839 - 3615862 + F 100 -15.2 -5.75342 | opp_overlap 3615839 CGGATCTCAGAAAAA CCCCCGCACC GAAA GGCGCGGGGG TTTTTTTTGAGCCAA TERM 4651 3615862 - 3615839 - f 100 -17.4 -4.85599 | opp_overlap 3615839 CGGATCTCAGAAAAA CCCCCGCACC GAAA GGCGCGGGGG TTTTTTTTGAGCCAA TERM 4652 3616817 - 3616797 - g 72 -9.1 -3.34398 | overlap 3616795 CGGGTCGTTTAAATA CTTTTGCAC CCA ATGCAAAAG TGATCCATATCGATA ilvG 3615947 - 3617596 + | Acetolactate synthase isozyme II large subunit ilvM 3617593 - 3617871 + | acetolactate synthase isozyme II small subunit ilvE 3617882 - 3618808 + | branched-chain amino acid aminotransferase TERM 4653 3618832 - 3618855 + F 73 -8.2 -3.4811 | overlap 3618830 AAATACATTTATTGA GCGAGTAG TTCGTTCC CTACTCGC TGTTATTATCGCAGG TERM 4654 3619683 - 3619670 - g 71 -5.3 -4.62085 | overlap 3619681 3619682 ATCGCTAAAAAAGAA GCATT TGAA AATGC GATGATCTTAGATAT ilvD 3618881 - 3620731 + | dihydroxy-acid dehydratase TERM 4655 3620758 - 3620779 + G 70 -8.8 -3.34398 | CTTTAGACCTTTAAC TTCAGCAC CCAGTA GTGCTGAA TATTTAAAAGCCGCA TERM 4656 3621171 - 3621152 - g 74 -6.4 -4.45544 | overlap 3621158 3621159 TTTGATGAAGCAAAA GCAAAAGC CATC GCTTTGGC AAAAGAGATGGGATA TERM 4657 3621183 - 3621158 - g 72 -4.7 -4.72729 | overlap 3621152 3621159 GAAGCAAAAGCAAAA GCCATCGCTTT GGCA AAAGAGATGGG ATATACCTTTGTGCC ilvA 3620735 - 3622309 + | threonine dehydratase biosynthetic ilvY 3623182 - 3622295 - | LysR-family transcriptional regulator TERM 4658 3623232 - 3623214 - H 71 -5.3 -4.54753 | opp_overlap 3623214, overlap 3623211 3623215 AAATAGTAAAAACAA CGTTGCA TTTAT TGCAACA TCATCTTGTAAATAT ilvC 3623355 - 3624830 + | ketol-acid reductoisomerase TERM 4659 3625047 - 3625006 - T 87 -10.7 -3.67141 | opp_overlap 3625005 3625006, overlap 3625017 ATAAGTTTATCCAAA GCACCGTAAAACCCCGTCC TTCA GGTCGGGGATATAAGGCGC GGTTTTTTAACTAAC TERM 4660 3625036 - 3625017 - T 95 -10.6 -4.18094 | opp_overlap 3625006 3625005, overlap 3625006 CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGGGG ATATAAGGCGCGGTT PMI3306 3625474 - 3625058 - | transposase TERM 4661 3626050 - 3626070 + G 77 -9.7 -3.54424 | TCGGGCTTGATGCAG GCGTGACAA AAC TTGCCACGC TTTCAGACGGTACGG TERM 4662 3626130 - 3626117 - g 75 -8.1 -4.06502 | CAGTTTTAAAGTAAA CCAGC GAAA GCTGG CAAGGCTTCAACGGA PMI3307 3625497 - 3626705 + | transposase TERM 4663 3626838 - 3626802 - T 77 -8.2 -3.93817 | opp_overlap 3626807, overlap 3626807 TATATTTTAAAAAGA TAAAACCACATATCTA TCAAT TTGATATGTGGTTTTT ATTTAAATAAATCAG TERM 4664 3626807 - 3626833 + T 93 -8.1 -5.30616 | opp_overlap 3626802 3626807 TTTAAAAAGATAAAA CCACATATCTA TCAAT TTGATATGTGG TTTTTATTTAAATAA TERM 4665 3626833 - 3626807 - T 91 -8.1 -4.98672 | opp_overlap 3626807, overlap 3626802 TTTAAAAAGATAAAA CCACATATCTA TCAAT TTGATATGTGG TTTTTATTTAAATAA PMI3308 3627097 - 3626837 - | plasmid stability protein TERM 4666 3627046 - 3627061 + g 74 -6.1 -4.39347 | TATTAATATCCTTTC CTCGC TTTTCT GCGAG TTTTAAGTCTTTTTT PMI3309 3627355 - 3627107 - | plasmid-related protein TERM 4667 3627984 - 3627959 - g 72 -4.7 -4.66833 | opp_overlap 3627959 3627962, overlap 3627962 3627964 CTCTAACTGGAAAAA TGACATGCTCA CACC TGAGCAAGTGA TTGGTAGAGCACAAT TERM 4668 3628642 - 3628655 + G 79 -3.1 -5.44119 | gap 1 TTCCTTATCGCATTT CG-GGT GAA ACCTCG TTTTTTTCCCGTGAA rep 3627528 - 3629549 + | ATP-dependent DNA helicase TERM 4669 3629570 - 3629602 + T 87 -8.6 -4.26019 | opp_overlap 3629573, overlap 3629573 TGTCAGTAAAAAATA AAATCCCTTACTTG CATGA TAAGTAAGGGATTA TTTTGAATCTGGTTA TERM 4670 3629599 - 3629573 - T 100 -9.6 -5.45813 | opp_overlap 3629570 3629573 CAGTAAAAAATAAAA TCCCTTACTT GCATGAT AAGTAAGGGA TTATTTTGAATCTGG TERM 4671 3629573 - 3629599 + T 95 -10.3 -4.23999 | opp_overlap 3629573, overlap 3629570 CAGTAAAAAATAAAA TCCCTTACTTG CATGA TAAGTAAGGGA TTATTTTGAATCTGG gppA 3631132 - 3629624 - | guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase TERM 4672 3630392 - 3630406 + g 75 -2.8 -5.30616 | TAACTCTTCAAGCTT GCCA CACTCAA TGGC TTTTTGTTTCAGTCG rhlB 3632434 - 3631136 - | ATP-dependent RNA helicase trxA 3632554 - 3632880 + | thioredoxin TERM 4673 3633368 - 3633386 + F 74 -9.6 -2.76046 | opp_overlap 3633367 3633368 3633371, overlap 3633371 TACACATGACGAAAC TGACAGCG ATT CGCTGTTA TACTATTCACGTTCA TERM 4674 3633383 - 3633371 - f 72 -9.1 -2.69042 | opp_overlap 3633371 3633368, overlap 3633368 3633367 ACATGACGAAACTGA CAGCG ATT CGCTG TTATACTATTCACGT TERM 4675 3633371 - 3633383 + F 78 -9.1 -3.52341 | opp_overlap 3633368 3633367 3633371, overlap 3633368 ACATGACGAAACTGA CAGCG ATT CGCTG TTATACTATTCACGT rho 3633442 - 3634701 + | transcription termination factor Rho TERM 4676 3634858 - 3634829 - f 74 -9.4 -2.7165 | opp_overlap 3634835, overlap 3634835 TAATTAACGATATGA TAAAAACGCCAC AAGTCA GTGGCGTTTTTT TTACATTGGACTTAG TERM 4677 3634852 - 3634835 - f 91 -8.4 -4.95758 | opp_overlap 3634835, overlap 3634829 ACGATATGATAAAAA CGCCAC AAGTCA GTGGCG TTTTTTTTACATTGG TERM 4678 3634835 - 3634852 + F 100 -8.4 -5.86332 | opp_overlap 3634835 3634829 ACGATATGATAAAAA CGCCAC AAGTCA GTGGCG TTTTTTTTACATTGG PMI3315 3634895 - 3635065 + | hypothetical protein TERM 4679 3636122 - 3636132 + G 79 -6.8 -4.63932 | opp_overlap 3636113, overlap 3636120 ATTAAACGCGCGTGG CGAG TCG CTCG TTTTATTAAACGATA wecA 3635096 - 3636187 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase TERM 4680 3636259 - 3636277 + G 78 -7.4 -4.32579 | opp_overlap 3636262, overlap 3636262 TTTTCACCCGATAAT GAACTCGA TAT TCGAGGTC TTTGTTGTGCACTAT wzzE 3636208 - 3637269 + | lipopolysaccharide biosynthesis protein TERM 4681 3637335 - 3637302 - f 86 -9.6 -3.96068 | opp_overlap 3637329, overlap 3637303 3637305 3637307 TCATTTTAATAATAA CGAGACATCAGGTG TATTTT CACCTGATGCCCCT GAGAATAAGGGCATA TERM 4682 3637334 - 3637303 - f 100 -13.1 -2.97158 | opp_overlap 3637329, overlap 3637302 3637305 3637307 CATTTTAATAATAAC GAGACATCAGGTG TATTTT CACCTGATGCCCC TGAGAATAAGGGCAT TERM 4683 3637332 - 3637305 - f 89 -12.1 -3.03309 | opp_overlap 3637329, overlap 3637303 3637302 3637307 TTTTAATAATAACGA GACATCAGGTG TATTTT CACCTGATGCC CCTGAGAATAAGGGC TERM 4684 3637330 - 3637307 - f 84 -11.1 -3.0663 | opp_overlap 3637329, overlap 3637305 3637303 3637302 TTAATAATAACGAGA CATCAGGTG TATTTT CACCTGATG CCCCTGAGAATAAGG TERM 4685 3637699 - 3637715 + G 88 -8.7 -4.83169 | opp_overlap 3637688 ACAACCACCACTATG GCGGCAA GCC TTGCTGC TTTTTATCAACAAAT rffE 3637399 - 3638529 + | UDP-N-acetylglucosamine 2-epimerase rffD 3638526 - 3639788 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4686 3639806 - 3639832 + G 73 -10 -2.78639 | overlap 3639804 3639805 CGTATTTTAGTCACA GGCGGCGCCGGT TTT ATCGGCTCCGCG GTTGTTAGACATATT rffG 3639779 - 3640852 + | dTDP-D-glucose-4,6-dehydratase TERM 4687 3641130 - 3641105 - g 71 -6.1 -4.19624 | opp_overlap 3641110 3641123 CATCTGCAATATAAA GTTCAGCCATC TCCT GATGGCTTAGC TCAAGCCTTTATTTT TERM 4688 3641123 - 3641137 + G 73 -5.7 -4.65263 | opp_overlap 3641105, overlap 3641110 CAGCCATCTCCTGAT GGCTT AGCTC AAGCC TTTATTTTAGGGGAT rffH 3640868 - 3641752 + | glucose-1-phosphate thymidylyltransferase rffC 3641730 - 3642443 + | lipopolysaccharide biosynthesis acetyltransferase rffA 3642445 - 3643575 + | lipopolysaccharide biosynthesis aminotransferase TERM 4689 3644647 - 3644664 + G 83 -6.3 -5.1523 | overlap 3644648 TGGCTATCTGGTGAT TGCAAAG GCTG CTTTGCG TTTTTATATTCTGAC wzxE 3643577 - 3644833 + | O-antigen translocase (flippase) TERM 4690 3645060 - 3645078 + G 79 -9 -3.8709 | opp_overlap 3645055 3645060 3645062 ATTAGCTAAAGCAGA TAGAAAAC AAC GTTTTCTA TTTCTGGGGCAATTT rffT 3644830 - 3645915 + | 4-alpha-L-fucosyltransferase wzyE 3645912 - 3647276 + | ECA polymerase rffM 3647276 - 3648013 + | probable UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4691 3648697 - 3648678 - f 100 -12.2 -5.31855 | opp_overlap 3648678 GACCAATAAGAAAAA GCCTCGAT ATAT ATCGAGGC TTTTTTGCATTTATT TERM 4692 3648678 - 3648697 + F 100 -12.2 -5.25805 | opp_overlap 3648678 GACCAATAAGAAAAA GCCTCGAT ATAT ATCGAGGC TTTTTTGCATTTATT TERM 4693 3649516 - 3649539 + F 100 -10.4 -5.82281 | ATTGTATATTTTATG CACCTGTATT TTTT AATACGGGTG TTTTTTTGTCTGTTT TERM 4694 3649662 - 3649650 - g 72 -3.3 -5.05712 | ATAAATAACCAAAAA GCGTA TCT TGCGC AAGAAAGGCTCTTTT TERM 4695 3649910 - 3649942 + G 71 -4.9 -4.60487 | TTTATTTTTAATTTT GTGTCTTGAAGTAGT ACT ACTGGTTCAACACGC TTTTTAAAAGTAATA PMI3328 3649632 - 3649949 + | hypothetical protein TERM 4696 3649984 - 3649963 - T 90 -5.9 -5.61689 | opp_overlap 3649963 AAAAGTAATAAAAAA CCCTCAA TTTTGTGT TTGAGGG TTTTGGTCAATAAAT hemY 3651241 - 3650012 - | porphyrin biosynthesis protein hemX 3652496 - 3651246 - | uroporphyrin-III C-methyltransferase TERM 4697 3652116 - 3652126 + g 71 -6.8 -4.06179 | overlap 3652118 TGCACTTGAGATAGC CGCA AAT TGCG TTTGTAAATTTTGGA hemD 3653254 - 3652517 - | uroporphyrinogen-III synthase TERM 4698 3652645 - 3652629 - G 71 -7.3 -3.80573 | opp_overlap 3652607 3652627 3652629 CTGACCACCACTAAA TGACTGT TTA ACAGCCA TGCTTTTTCAGATCC hemC 3654192 - 3653251 - | porphobilinogen deaminase TERM 4699 3654662 - 3654646 - H 71 -5.3 -4.65969 | AATAAATAATGAAAA TTTAAAT TTT ATTTAAA TAGACAATGATGAAG TERM 4700 3655354 - 3655364 + G 70 -5.4 -4.42806 | opp_overlap 3655347, overlap 3655347 CAAGGAAATGTCCCT CATG GTA CATG TTTCTTTGAACCTGA TERM 4701 3656338 - 3656322 - g 70 -8.7 -3.40622 | TAGCTGGAAAATAGA GCGCGTT CGT AACGCAC ATAATGAATTATTAG cyaA 3655180 - 3657777 + | adenylate cyclase TERM 4702 3657833 - 3657806 - T 87 -10.6 -3.63656 | opp_overlap 3657802 3657806 AAAACCGATAGAGAA GTGATGGGGACT TTCC AGCACCCATCAC TTAGTTGTTTGTGTT TERM 4703 3657806 - 3657833 + T 75 -8.4 -3.68209 | opp_overlap 3657806, overlap 3657802 AAAACCGATAGAGAA GTGATGGGGACT TTCC AGCACCCATCAC TTAGTTGTTTGTGTT cyaY 3658170 - 3657847 - | CyaY protein PMI3335 3658227 - 3658412 + | lipoprotein TERM 4704 3658440 - 3658422 - f 100 -13.2 -2.76736 | opp_overlap 3658426, overlap 3658426 AATTAGTCAATATTA GAAACGGG ACA CCCGTTTC AGGCAGGGTTAAGAT TERM 4705 3658436 - 3658426 - f 79 -8.2 -4.06786 | opp_overlap 3658426, overlap 3658422 AGTCAATATTAGAAA CGGG ACA CCCG TTTCAGGCAGGGTTA TERM 4706 3658426 - 3658436 + F 73 -8.2 -3.53761 | opp_overlap 3658426 3658422 AGTCAATATTAGAAA CGGG ACA CCCG TTTCAGGCAGGGTTA dapF 3658454 - 3659278 + | diaminopimelate epimerase PMI3337 3659303 - 3660013 + | hypothetical protein xerC 3660010 - 3660933 + | tyrosine recombinase PMI3339 3660933 - 3661649 + | haloacid dehalogenase-like hydrolase TERM 4707 3661722 - 3661747 + F 77 -8.5 -3.66896 | CGGGCGTAAAATCCT GTTAGTTTGTT GCTT AATAAACTAAC TTCTGTATATATCCA uvrD 3661795 - 3663951 + | DNA helicase II TERM 4708 3664004 - 3664036 + F 100 -8.5 -5.86061 | opp_overlap 3664004 AGCAATATAAAAAAA CACCCTTACTAATCT AGA AGATAGTTAAGGGTG TTTTTTTTAATGAAC TERM 4709 3664036 - 3664004 - f 100 -8 -5.82172 | opp_overlap 3664004 AGCAATATAAAAAAA CACCCTT-ACTAATCT AGA AGA-TAGTTAAGGGTG TTTTTTTTAATGAAC TERM 4710 3664453 - 3664480 + G 71 -7 -4.00469 | overlap 3664451 3664454 AAGAGCACTCAAGCC CTGCCAGAAAGG GGTA TCTTTCTGGCGC TTTCATTAGTATTGA TERM 4711 3664454 - 3664479 + G 75 -10.5 -2.99558 | overlap 3664451 3664453 AGAGCACTCAAGCCC TGCCAGAAAGG GGTA TCTTTCTGGCG CTTTCATTAGTATTG PMI3341 3664107 - 3664511 + | hypothetical protein rarD 3665415 - 3664522 - | chloramphenicol-sensitive protein TERM 4712 3665166 - 3665154 - G 76 -9.1 -3.66896 | CCCATATATAGATAA GCCAG TTA CTGGC AATAATCACCGCAGT TERM 4713 3665184 - 3665199 + g 74 -4 -5.0538 | TAATCACCGCAGTAA GTGCTA ACAT TAGTAC TTTTTTGGGCTGACG TERM 4714 3665460 - 3665497 + r 81 -4.3 -5.42259 | gap 1, opp_overlap 3665464, overlap 3665477 ATGTGACGGGGTTAT CATACCCAATGACATTAT CTA ATG-TGTCATTAGGCATG TTTTTTTACAAGTAA PMI3343 3666017 - 3665550 - | thioesterase pldA 3666252 - 3667127 + | phospholipase A TERM 4715 3667169 - 3667188 + F 84 -6.4 -5.14626 | opp_overlap 3667162, overlap 3667163 ACGACAAGTGGTGAT GGCACC TTTATACT GGTGCC TTTTCTTTTACTCCT TERM 4716 3668811 - 3668800 - g 72 -3.6 -5.10208 | TAAGCCCAACAAAAA GCCG TTAT CAGC AAACAAAAAATAGTC recQ 3667239 - 3669068 + | ATP-dependent DNA helicase TERM 4717 3669433 - 3669451 + G 77 -8.2 -4.28111 | AAAATTCAGTGATTA TGTCGATG ATT TATCGACA TTTATTGATACTATC TERM 4718 3669497 - 3669522 + G 73 -8.3 -3.6422 | gap 1, overlap 3669495 TATCAGCACTATTTT GCGTTAGCCCAT TCG ATGGGC-GGCGC TATTTTAGCCAGCTA TERM 4719 3669568 - 3669586 + G 72 -10.2 -2.64679 | overlap 3669567 3669560 TGATATTTTCCAAGC CGCCGCAC TGT GTGCGCCG ATGTTTGGGATTAAT TERM 4720 3669986 - 3669976 - g 79 -5.4 -4.94147 | AACAAGAGAAGAAAA GCAA AAA TTGC CACTTGTGATTGAAG pldB 3669089 - 3670093 + | lysophospholipase L2 PMI3347 3670106 - 3670906 + | haloacid dehalogenase-like hydrolase TERM 4721 3670926 - 3670956 + T 85 -10.6 -3.53343 | opp_overlap 3670926 3670927 3670932, overlap 3670927 3670932 AACCAATGGGATAAA TTAAAAGGCGGA TAATACT TCCGCCTTTTAG TTTAAGAGCGCAATT TERM 4722 3670956 - 3670926 - T 77 -8.4 -3.93638 | opp_overlap 3670926 3670927 3670932, overlap 3670927 3670932 AACCAATGGGATAAA TTAAAAGGCGGA TAATACT TCCGCCTTTTAG TTTAAGAGCGCAATT TERM 4723 3670927 - 3670955 + T 87 -11.9 -2.71791 | opp_overlap 3670926 3670927 3670932, overlap 3670926 3670932 ACCAATGGGATAAAT TAAAAGGCGGA TAATACT TCCGCCTTTTA GTTTAAGAGCGCAAT TERM 4724 3670955 - 3670927 - T 88 -11.9 -2.95459 | opp_overlap 3670927 3670926 3670932, overlap 3670926 3670932 ACCAATGGGATAAAT TAAAAGGCGGA TAATACT TCCGCCTTTTA GTTTAAGAGCGCAAT TERM 4725 3670932 - 3670950 + T 80 -7.4 -4.54727 | opp_overlap 3670932 3670927 3670926, overlap 3670927 3670926 TGGGATAAATTAAAA GGCGGA TAATACT TCCGCC TTTTAGTTTAAGAGC TERM 4726 3670950 - 3670932 - T 80 -7.4 -4.61873 | opp_overlap 3670927 3670926 3670932, overlap 3670927 3670926 TGGGATAAATTAAAA GGCGGA TAATACT TCCGCC TTTTAGTTTAAGAGC PMI3348 3672003 - 3670975 - | fimbrial adhesin TERM 4727 3671115 - 3671131 + g 71 -5.1 -4.49756 | overlap 3671130 CCGTTATCAATTTTC CTAACTC AAT GGGTTGG TTTTGGTATTTCACC PMI3349 3674529 - 3672004 - | fimbrial outer membrane usher protein PMI3350 3675201 - 3674542 - | fimbrial chaperone TERM 4728 3675227 - 3675254 + r 80 -7.8 -4.21885 | overlap 3675220 3675229 3675230 3675232 AAGTTTGAGGAGAGG TGAGAGGGTAAT GGTG ATTACCCTCATA TTTATCATTTATTAT TERM 4729 3675229 - 3675252 + r 75 -8.2 -3.68727 | overlap 3675227 3675220 3675230 3675232 GTTTGAGGAGAGGTG AGAGGGTAAT GGTG ATTACCCTCA TATTTATCATTTATT TERM 4730 3675230 - 3675251 + r 88 -11.7 -2.79609 | overlap 3675229 3675227 3675220 3675232 TTTGAGGAGAGGTGA GAGGGTAAT GGTG ATTACCCTC ATATTTATCATTTAT TERM 4731 3675232 - 3675249 + r 71 -8.5 -2.92928 | overlap 3675230 3675229 3675227 3675220 TGAGGAGAGGTGAGA GGGTAAT GGTG ATTACCC TCATATTTATCATTT PMI3352 3675787 - 3675266 - | frimbrial protein TERM 4732 3675801 - 3675826 + r 80 -10.7 -2.60511 | opp_overlap 3675807, overlap 3675800 3675807 ATGATCGGTCCTATA TAAAAAGTAAG CGAA CTTACTTTTTA ATCTATTTATAAGTA TERM 4733 3675807 - 3675820 + r 74 -5.3 -4.90217 | opp_overlap 3675807, overlap 3675801 3675800 GGTCCTATATAAAAA GTAAG CGAA CTTAC TTTTTAATCTATTTA TERM 4734 3675820 - 3675807 - R 76 -5.3 -4.96848 | opp_overlap 3675807 3675801 3675800 GGTCCTATATAAAAA GTAAG CGAA CTTAC TTTTTAATCTATTTA PMI3353 3676862 - 3675999 - | LysR-family transcriptional regulator TERM 4735 3676047 - 3676062 + g 79 -4.8 -5.09204 | opp_overlap 3676032 3676059 TAAACTTTGCAAGTT TTCATT AATA AATGAA TTTTTATTCAAATAT TERM 4736 3678100 - 3678136 + r 70 -3.8 -5.07486 | opp_overlap 3678094 AACAAGAAGCAAAAA TGCCACTATTTTGGTT TTTTC ATTTAAATTAGTGGCA TTTTTATTCAAAGTA PMI3354 3681501 - 3678166 - | mechanosensitive ion channel TERM 4737 3679249 - 3679267 + g 75 -10.4 -2.94563 | overlap 3679248 ATTCTCATCTTCCCC TTTAGCTC GTT GAGCTAAA ATTTCTGCCCGTTTT TERM 4738 3679529 - 3679540 + g 81 -5.8 -5.09426 | opp_overlap 3679528 TTATCTAAGTAAAGC GGCA CATG TGCC TTTTTTAGGCTTGAG TERM 4739 3679613 - 3679598 - G 80 -4.6 -5.24003 | overlap 3679599 AATAAAAAGCAAAAA CGCCCA ACCG TTGGCG CAAATTCTCTGTCAC TERM 4740 3680744 - 3680756 + g 80 -7.7 -4.36366 | overlap 3680742 GGGAGTTCGCCCCCT TGCTC GGC GAGCA TTTCTGTCTTTTCTA TERM 4741 3680843 - 3680853 + g 81 -5.4 -5.09895 | AGTTGTACATCAAGT CGTT GAT AACG TTTTTTAAATAGCTC TERM 4742 3681263 - 3681301 + g 70 -9 -3.20361 | AACTCTTGAGTGATC TGCGGATATTCATCAATA GTC TTTTGATAATTATCCGCA TTAACTTGAGCTTTT psd 3682435 - 3681524 - | phosphatidylserine decarboxylase proenzyme engC 3683582 - 3682524 - | probable GTPase orn 3683698 - 3684243 + | oligoribonuclease TERM 4743 3684453 - 3684437 - T 74 -9.5 -2.62616 | overlap 3684440 TCAGTTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 4744 3684561 - 3684545 - T 74 -9.5 -2.62616 | overlap 3684548 TCAGTTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 4745 3684677 - 3684661 - T 74 -9.5 -2.62616 | overlap 3684664 TCAGTTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA PMI3358 3685169 - 3684843 - | plasmid stabilization protein PMI3359 3685444 - 3685175 - | antitoxin PMI3360 3687546 - 3686392 - | 4Fe-4S binding protein PMI3361 3687768 - 3688235 + | ATP/GTP hydrolase TERM 4746 3688751 - 3688735 - g 71 -5.1 -4.51743 | TTATCAGCAAACAAA GCCAC AAATACG GTGGC TAATCAACAGATGGC amiB 3688330 - 3689565 + | N-acetylmuramoyl-l-alanine amidase mutL 3689587 - 3691596 + | DNA mismatch repair protein miaA 3691565 - 3692506 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 3692616 - 3692906 + | protein Hfq (host factor-I protein) TERM 4747 3692962 - 3692938 - f 83 -5.7 -5.29716 | opp_overlap 3692938 TTAATATAATAAAAA CATAGGTAGGG AGA CTTTACCTATG TTTTTCCTGTTTTTA TERM 4748 3692938 - 3692962 + F 100 -10.1 -5.02231 | opp_overlap 3692938 TTAATATAATAAAAA CATAGGTAGGG AGA CTTTACCTATG TTTTTCCTGTTTTTA hflX 3693000 - 3694283 + | GTP-binding protein TERM 4749 3694573 - 3694562 - g 79 -5.8 -5.00616 | opp_overlap 3694562 3694563, overlap 3694563 TTCGGTGGTAAAAAA GGAG GAAA CTCC TCTTCTGGGCAAAAT TERM 4750 3694821 - 3694797 - g 74 -4.9 -4.74103 | CTGTCAACGTAAAAA CCATCCGTGAT TTA ACTACGGGTGG CATGATGTTGACATC TERM 4751 3695396 - 3695381 - g 70 -3.3 -4.8384 | GAAACAATGGAAAAA GTGTT GTCGAA AACAC GTAAAGTCATTGCCA TERM 4752 3695416 - 3695402 - g 71 -7.2 -3.85184 | overlap 3695406 TCGAAAACACGTAAA GTCATT GCC AATGAC AAAGGTAACAGTATG hflK 3694376 - 3695650 + | HflK protein (regulator of FtsH protease) hflC 3695653 - 3696657 + | HflC protein (regulator of FtsH protease) TERM 4753 3696712 - 3696685 - f 74 -8.5 -3.28719 | opp_overlap 3696687, overlap 3696684 3696681 3696687 AAGAAAATAAATAAT CATCCCCTAAG ATAAAA CTTAGGGGATT TTTTTAGCTTTTAAT TERM 4754 3696710 - 3696687 - f 84 -11.1 -3.16872 | opp_overlap 3696687, overlap 3696685 3696684 3696681 GAAAATAAATAATCA TCCCCTAAG ATAAAA CTTAGGGGA TTTTTTTAGCTTTTA TERM 4755 3696687 - 3696710 + F 100 -11.1 -5.61824 | opp_overlap 3696687 3696685 3696684 3696681 GAAAATAAATAATCA TCCCCTAAG ATAAAA CTTAGGGGA TTTTTTTAGCTTTTA TERM 4756 3696965 - 3696949 - g 79 -5.9 -4.84017 | opp_overlap 3696947 3696949 AACTGTTGATAAAAA TCACAAA TAT CTTGTGA TGTGGTTTTTTCGGG PMI3369 3696836 - 3697006 + | hypothetical protein TERM 4757 3697851 - 3697839 - g 72 -9.1 -3.35046 | opp_overlap 3697839, overlap 3697837 TCACCTCTTCAAATA CCACC GCA GGTGG TGTTGCAACAGGTTC purA 3697109 - 3698407 + | adenylosuccinate synthetase TERM 4758 3698438 - 3698462 + F 95 -9.3 -5.25893 | opp_overlap 3698438 GGTTTGATGTGAAAA TCGTCCCTG AAAATGA CAGGGGCGA TTTTTTCGTATCTGT TERM 4759 3698462 - 3698438 - f 74 -7.1 -4.13767 | opp_overlap 3698438 GGTTTGATGTGAAAA TCGTCCCTG AAAATGA CAGGGGCGA TTTTTTCGTATCTGT TERM 4760 3698535 - 3698519 - f 80 -7.3 -4.73613 | TGATTAGCAATAAAA CGAGAAA CAG TTTCCCG CTCGGTTGCGTTTTT TERM 4761 3698612 - 3698639 + F 91 -7.1 -5.31519 | gap 1, opp_overlap 3698612 3698627 TGTCAACTAAGAGAA GCGAT-CTGTTG AAAAG CGACAGGATCGC TTTTTCTTTGCCTGT PMI3371 3698833 - 3699261 + | transcriptional regulator TERM 4762 3701257 - 3701269 + G 75 -7.7 -3.97446 | opp_overlap 3701245 TTACCGGTATTATTA CCAGT GTC ACTGG TTTCGGTTTCTTTGT TERM 4763 3701527 - 3701514 - g 70 -8.1 -3.64488 | overlap 3701512 AACCCCGGGAAAACA GCACG TGTT CGTGC GTTAAAAGGGGGAAA rnr 3699300 - 3701789 + | ribonuclease R TERM 4764 3701826 - 3701850 + F 88 -11.5 -3.3161 | opp_overlap 3701831, overlap 3701831 TGTTTGACTCCTATT AAAAAGGCGGA TTT TCCGCCTTTTA TCTGTTATTGTGCCT TERM 4765 3701831 - 3701845 + F 100 -11.4 -4.73633 | opp_overlap 3701831, overlap 3701826 GACTCCTATTAAAAA GGCGGA TTT TCCGCC TTTTATCTGTTATTG TERM 4766 3701845 - 3701831 - f 100 -11.4 -4.72986 | opp_overlap 3701831 3701826 GACTCCTATTAAAAA GGCGGA TTT TCCGCC TTTTATCTGTTATTG TERM 4767 3702576 - 3702592 + G 74 -5.1 -4.78326 | CTCTTCATTAAATGT CTCCG TGGCAAC CGGAG TTTGTTTATTTGAAG rlmB 3701893 - 3702636 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 4768 3703127 - 3703115 - g 82 -7.7 -4.55128 | opp_overlap 3703121, overlap 3703121 ATGGTTAAAGCAAAA GACGA ACG TCGTC GCGATGTTGCTGAAG rpsF 3702797 - 3703192 + | 30S ribosomal protein S6 TERM 4769 3703365 - 3703334 - g 83 -7.4 -4.73388 | gap 1, opp_overlap 3703342 AAGCGGGATTAAAAA GACAATCATGGTGCA GAA TGC-CCATTATTGCC AGTGGGAAAGCGTTA TERM 4770 3703407 - 3703423 + G 73 -8.7 -3.62478 | TCACAGTATAACGGT CGGTAGC AAA GTTACCG TTTCAGGATTCATTA priB 3703201 - 3703518 + | primosomal replication protein N TERM 4771 3703688 - 3703675 - g 70 -8.1 -3.6422 | opp_overlap 3703680 3703682, overlap 3703673 TACTCGTGCAAAATA CCAGC GTCA GCTGG CTCGTGCTATCAAGC rpsR 3703523 - 3703750 + | 30S ribosomal protein S18 rplI 3703794 - 3704243 + | 50S ribosomal protein L9 TERM 4772 3704277 - 3704293 + T 100 -13.7 -5.38951 | opp_overlap 3704277 ATGTTGATAGAAAAA CGCCAGC TTA GCTGGCG TTTTTTATATAGGTT TERM 4773 3704293 - 3704277 - T 100 -13.7 -4.9725 | opp_overlap 3704277 ATGTTGATAGAAAAA CGCCAGC TTA GCTGGCG TTTTTTATATAGGTT PMI3378 3705001 - 3704342 - | hypothetical protein TERM 4774 3705585 - 3705598 + G 71 -6.7 -4.13343 | GAAGGTAATGTGGCA CGCTT TAAT AAGCG TTTTGGCCGATTTGT rpmE2 3705372 - 3705620 + | 50S ribosomal protein L31 type B PMI3380 3705760 - 3706407 + | hypothetical protein TERM 4775 3706441 - 3706470 + T 100 -14.5 -3.85698 | opp_overlap 3706444, overlap 3706444 CTATTGGGCTGACAT CAATACCCTTGAT ATTT ATCGAGGGTATTG TTTATCCAAAGCACC TERM 4776 3706444 - 3706467 + T 91 -10.4 -4.06419 | opp_overlap 3706444, overlap 3706441 TTGGGCTGACATCAA TACCCTTGAT ATTT ATCGAGGGTA TTGTTTATCCAAAGC TERM 4777 3706467 - 3706444 - T 71 -8.2 -3.25823 | opp_overlap 3706444 3706441 TTGGGCTGACATCAA TACCCTTGAT ATTT ATCGAGGGTA TTGTTTATCCAAAGC TERM 4778 3706511 - 3706492 - T 95 -10.6 -4.18094 | opp_overlap 3706482 CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGGGG ATATAAGGCGTGGTT PMI3381 3706949 - 3706533 - | transposase PMI3382 3706972 - 3708180 + | transposase gabD 3709745 - 3708297 - | succinate-semialdehyde dehydrogenase TERM 4779 3708774 - 3708794 + g 71 -4 -4.86862 | overlap 3708775 CCCAATAGTCACGCC TTCGGTAA AGCCA TTACCGAC TTTTAGTTTTTTAAC TERM 4780 3709573 - 3709592 + g 86 -10.7 -3.88178 | overlap 3709567 GTCGGTAATGCTTTG GCGGCTG CATCAA CAGCCGC TTTGGCTTCTTCTGT fklB 3710005 - 3710625 + | FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase TERM 4781 3710653 - 3710672 + F 95 -9.3 -5.07275 | opp_overlap 3710650 3710653 3710655 CAAAAAATAACACTA TAGCCGG TTTTTT CCGGCTA TTTTTGTCTCTATAC TERM 4782 3710672 - 3710653 - f 74 -9.3 -3.00046 | opp_overlap 3710653, overlap 3710650 3710655 CAAAAAATAACACTA TAGCCGG TTTTTT CCGGCTA TTTTTGTCTCTATAC TERM 4783 3710980 - 3710996 + G 70 -7.9 -3.70853 | opp_overlap 3710980, overlap 3710984 CCTGCGTGGGAAGAA CGTCGCC ATT GGCAACG TTATTGGCTGATTGA TERM 4784 3710996 - 3710980 - g 79 -10.1 -3.61398 | opp_overlap 3710980 3710984 CCTGCGTGGGAAGAA CGTCGCC ATT GGCAACG TTATTGGCTGATTGA cysQ 3710764 - 3711504 + | inositol monophosphatase family protein TERM 4785 3711544 - 3711516 - T 70 -8.1 -2.9953 | opp_overlap 3711514, overlap 3711511 3711519 CTAATGATAACGAGA GCAGAGCCCTTAA GTT TAAAGGGCTCCGA TACAGATAATTTAAA TERM 4786 3711541 - 3711519 - T 80 -10.6 -2.72031 | opp_overlap 3711514, overlap 3711516 3711511 ATGATAACGAGAGCA GAGCCCTTAA GTT TAAAGGGCTC CGATACAGATAATTT PMI3386 3712122 - 3711562 - | hypothetical protein PMI3387 3712406 - 3712612 + | hypothetical protein PMI3388 3714070 - 3712697 - | transporter msrA 3714871 - 3714233 - | peptide methionine sulfoxide reductase TERM 4787 3714709 - 3714697 - G 76 -9.1 -3.63744 | overlap 3714695 GTTGTTGCCAAAATA GGCGT TCA ACGCC CCAAAAGCAGCCCAT TERM 4788 3715198 - 3715208 + G 73 -8.2 -3.87576 | opp_overlap 3715198 3715197 3715195 AAGGCAATTAAAGAG GGCC TAC GGCC TTTAGGTTATTATCA PMI3390 3714997 - 3716739 + | cell surface protein TERM 4789 3718278 - 3718268 - g 70 -2.6 -5.15969 | TGGTAATTTAAAAAA TAAT CTT ATTA AGGCGCGAGGAAACG PMI3391 3716739 - 3720557 + | hypothetical protein PMI3392 3720563 - 3720910 + | hypothetical protein TERM 4790 3720975 - 3720938 - f 79 -10.1 -2.80522 | opp_overlap 3720948, overlap 3720948 AGCTGACTCAATAAT GATTAAAAAAGCTCGAT ATAT ATCGAGCTTTTTTATTT TTACTAAAAGTAGTA TERM 4791 3720965 - 3720948 - f 100 -9.9 -5.22794 | opp_overlap 3720948, overlap 3720938 ATAATGATTAAAAAA GCTCGAT ATAT ATCGAGC TTTTTTATTTTTACT TERM 4792 3720948 - 3720965 + F 100 -9.9 -5.95286 | opp_overlap 3720948 3720938 ATAATGATTAAAAAA GCTCGAT ATAT ATCGAGC TTTTTTATTTTTACT PMI3393 3721164 - 3721427 + | hypothetical protein TERM 4793 3721435 - 3721450 + F 95 -10.4 -4.65895 | opp_overlap 3721435 GTCTTTAATCAATAA GCAGCC ATAA GGCTGC TTTTTAAATGAAAGG TERM 4794 3721450 - 3721435 - f 89 -10.4 -3.81146 | opp_overlap 3721435 GTCTTTAATCAATAA GCAGCC ATAA GGCTGC TTTTTAAATGAAAGG PMI3394 3721474 - 3722766 + | DTDP-6-deoxy-D-glucose-3,5-epimerase PMI3395 3722775 - 3723968 + | MFS-family transporter TERM 4795 3723995 - 3723961 - T 87 -11.6 -2.99393 | opp_overlap 3723966 3723969, overlap 3723966 AAAAAGAGATAATCA TAAAATAAGCCCACAT TTG AAGTGGGCTTATTTTG GCTAAGCAACCAATG TERM 4796 3723966 - 3723990 + T 100 -11.5 -4.18018 | opp_overlap 3723961 3723966, overlap 3723969 GAGATAATCATAAAA TAAGCCCACAT TTG AAGTGGGCTTA TTTTGGCTAAGCAAC TERM 4797 3723990 - 3723966 - T 100 -11.5 -4.60073 | opp_overlap 3723966 3723969, overlap 3723961 GAGATAATCATAAAA TAAGCCCACAT TTG AAGTGGGCTTA TTTTGGCTAAGCAAC TERM 4798 3723969 - 3723987 + T 87 -8.8 -4.21812 | opp_overlap 3723966 3723961, overlap 3723966 ATAATCATAAAATAA GCCCACAT TTG AAGTGGGC TTATTTTGGCTAAGC ppa 3724573 - 3724046 - | inorganic pyrophosphatase TERM 4799 3724591 - 3724580 - R 71 -3 -5.252 | CAGGCTCATAAAAAA TTTC CTAT GAAA AATTAATTTGACGTG fbp 3725780 - 3724773 - | fructose-1,6-bisphosphatase TERM 4800 3725832 - 3725819 - H 84 -5.3 -5.32599 | opp_overlap 3725819, overlap 3725813 GATAAAATATAAAAA GGAAA AAAG TTTCC TTATTAGTGGCAAGT mpl 3725946 - 3727325 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (murein peptide ligase) TERM 4801 3727333 - 3727364 + T 100 -14.6 -3.94276 | opp_overlap 3727335, overlap 3727323 3727335 AATATTAATTTAAAT AAGTAAGCCACTGA AATT TCAGTGGCTTACTG TTTATGACCTATTTT TERM 4802 3727362 - 3727335 - T 100 -17.2 -4.02051 | opp_overlap 3727333 3727323 3727335 TATTAATTTAAATAA GTAAGCCACTGA AATT TCAGTGGCTTAC TGTTTATGACCTATT TERM 4803 3727335 - 3727362 + T 100 -17.2 -3.54848 | opp_overlap 3727335, overlap 3727333 3727323 TATTAATTTAAATAA GTAAGCCACTGA AATT TCAGTGGCTTAC TGTTTATGACCTATT argR 3727864 - 3727394 - | arginine repressor TERM 4804 3727487 - 3727474 - G 76 -3.1 -5.24129 | CGGGTGTAGAAAAAA TAGTG TCAT CACCA GCGATACTTCCGAGG mdh 3728315 - 3729253 + | malate dehydrogenase TERM 4805 3729288 - 3729327 + T 100 -16.2 -3.49182 | gap 1, opp_overlap 3729298, overlap 3729298 3729326 AAAATAATGTAAATT TAAATAAAAACCGCTGATA GTG TATCAGCGGTTTTT-TTTA TTAATTATAATATAT TERM 4806 3729298 - 3729318 + T 100 -14.1 -6.15536 | opp_overlap 3729298, overlap 3729288 AAATTTAAATAAAAA CCGCTGATA GTG TATCAGCGG TTTTTTTTATTAATT TERM 4807 3729318 - 3729298 - T 100 -14.1 -5.34381 | opp_overlap 3729288 3729298 AAATTTAAATAAAAA CCGCTGATA GTG TATCAGCGG TTTTTTTTATTAATT sfsB 3729620 - 3729354 - | sugar fermentation stimulation protein TERM 4808 3729603 - 3729619 + g 71 -3.7 -4.88129 | opp_overlap 3729604 3729606, overlap 3729604 GGCAGGATGCCAATC AGATTTC CTT GAAATCA TTTTTAATCCTTTTT PMI3402 3729806 - 3730153 + | hypothetical protein TERM 4809 3730537 - 3730518 - g 88 -8 -5.04385 | opp_overlap 3730531 3730532 CAGAGCGTGAAAAAA TCGTAAAA TTTG TTTTACGA GAAGGTCTCGCTAAG TERM 4810 3730668 - 3730623 - g 100 -14.9 -3.34488 | gap 1, opp_overlap 3730629 3730664 3730665, overlap 3730629 AAGTGGTTCAAAAAT TAAAAAGCCCCCCAGAGTCGAC ATA GTCG-CTCTGACGGGCTTCTCA TACTTTATGGGGTTT PMI3403 3730232 - 3730648 + | phage-related DNA-binding protein TERM 4811 3730629 - 3730662 + T 91 -11.7 -3.50995 | gap 1, opp_overlap 3730623 3730629 TTCAAAAATTAAAAA GCCCCCCAGAGTCGAC ATA GTCG-CTCTGACGGGC TTCTCATACTTTATG TERM 4812 3730662 - 3730629 - T 100 -13.9 -5.18355 | gap 1, opp_overlap 3730629, overlap 3730623 TTCAAAAATTAAAAA GCCCCCCAGAGTCGAC ATA GTCG-CTCTGACGGGC TTCTCATACTTTATG ispB 3731666 - 3730695 - | octaprenyl-diphosphate synthase TERM 4813 3731363 - 3731374 + g 70 -5.8 -4.48299 | opp_overlap 3731361 3731363 CAGCATTACCAAACA CAGC ATTA GCTG TTTGTTTGCCTCTAC rplU 3731929 - 3732237 + | 50S ribosomal protein L21 TERM 4814 3732410 - 3732431 + G 72 -8.7 -3.46783 | overlap 3732408 GCAGGTACTAACGTT GGTTGTGGT CGTG ACCACACCC TGTTTGCGTTAGCTG rpmA 3732257 - 3732514 + | 50S ribosomal protein L27 TERM 4815 3732538 - 3732573 + F 83 -10.6 -3.34398 | gap 1, opp_overlap 3732544, overlap 3732544 CCTTTAAACACCGAG TTAAAAGCCCTGC-ACA GTC TGTTGCGGGGCTTTTTA TATTTAAAAAAGGCC TERM 4816 3732567 - 3732544 - f 76 -7.4 -4.20932 | gap 1, opp_overlap 3732538 3732544 AACACCGAGTTAAAA GCCCTGC-ACA GTC TGTTGCGGGGC TTTTTATATTTAAAA TERM 4817 3732544 - 3732567 + F 100 -9.6 -5.19879 | gap 1, opp_overlap 3732544, overlap 3732538 AACACCGAGTTAAAA GCCCTGC-ACA GTC TGTTGCGGGGC TTTTTATATTTAAAA PMI3407 3732646 - 3733815 + | GTP-binding protein TERM 4818 3733876 - 3733905 + T 90 -12.3 -2.91924 | opp_overlap 3733882, overlap 3733882 CAGATAGCGAGACAT AAAAAACGCCTGA ATTT TCAGGCGTTTTTA CTTTCTAACAAATAA TERM 4819 3733882 - 3733899 + T 100 -11.3 -5.04601 | opp_overlap 3733882, overlap 3733876 GCGAGACATAAAAAA CGCCTGA ATTT TCAGGCG TTTTTACTTTCTAAC TERM 4820 3733899 - 3733882 - T 100 -11.3 -5.4251 | opp_overlap 3733882 3733876 GCGAGACATAAAAAA CGCCTGA ATTT TCAGGCG TTTTTACTTTCTAAC dacB 3735368 - 3733926 - | penicillin-binding protein greA 3735782 - 3736258 + | transcription elongation factor TERM 4821 3736318 - 3736331 + T 91 -8.1 -5.0538 | opp_overlap 3736318 GGTAATATTAAAAAA GGCCT GAAA AGGCC TTTTTTGCCATAGAG TERM 4822 3736331 - 3736318 - T 93 -8.1 -5.27779 | opp_overlap 3736318 GGTAATATTAAAAAA GGCCT GAAA AGGCC TTTTTTGCCATAGAG TERM 4823 3736337 - 3736358 + T 76 -5.2 -4.9725 | TGAAAAGGCCTTTTT TGCCATAG AGTTAG TTATGGCA TTTTTATATAAAGGT PMI3410 3736674 - 3736381 - | RNA-binding protein TERM 4824 3736640 - 3736652 + g 75 -2.7 -5.20735 | TGATGAGCGAGCCCT TTCAG GTG TTGAA TTTGTTTTTTGTTAA ftsJ 3736820 - 3737449 + | ribosomal RNA large subunit methyltransferase J (cell division protein FtsJ) TERM 4825 3739265 - 3739231 - g 73 -8 -3.93288 | CTGCACTCAATGAAA GATGCATTAATGACTT ATG AAACCATTGATGCACC TCAAATTGATGACTT ftsH 3737506 - 3739446 + | cell division protein TERM 4826 3739487 - 3739503 + F 100 -10.1 -5.72616 | opp_overlap 3739487 AGCTATAAATACAAA CCCCAGG CTT TCTGGGG TTTTTTTATATAGGT TERM 4827 3739503 - 3739487 - f 91 -9.4 -4.40605 | opp_overlap 3739487 AGCTATAAATACAAA CCCCAG GCTTT CTGGGG TTTTTTTATATAGGT folP 3739528 - 3740370 + | dihydropteroate synthase glmM 3740367 - 3741704 + | phosphoglucosamine mutase secG 3741871 - 3742215 + | protein-export membrane protein TERM 4828 3742620 - 3742648 + F 90 -12.5 -3.29511 | opp_overlap 3742626 3742627, overlap 3742627 TACAGGGTCCAGTTG CATAAAGCCCCGA ATT TCGGGGTTTTTTG TTATCAGAGAATAGA TERM 4829 3742642 - 3742626 - f 74 -7.9 -3.87815 | opp_overlap 3742620 3742627, overlap 3742627 GTCCAGTTGCATAAA GCCCCGA ATT TCGGGGT TTTTTGTTATCAGAG TERM 4830 3742627 - 3742641 + F 100 -11.4 -5.55769 | opp_overlap 3742626 3742627, overlap 3742620 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATCAGA TERM 4831 3742641 - 3742627 - f 86 -11.4 -2.92475 | opp_overlap 3742627 3742620, overlap 3742626 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATCAGA TERM 4832 3742669 - 3742681 + F 100 -9.1 -5.66684 | opp_overlap 3742668 3742667 AGAGAATAGAATACT GGGCT ATA AGCCC TTTTTTTATGCCTTG TERM 4833 3742990 - 3743006 + G 79 -9.4 -3.67498 | opp_overlap 3742989 TTATGAGCAATTTAT CGGCGA AGAAG TCGCCG TTGTATTACGAATTG PMI3416 3742700 - 3743158 + | hypothetical protein TERM 4834 3744193 - 3744181 - g 72 -3.4 -5.12617 | CAATTACTGAAAAAA CATC GTGGT GATG ACAAATGGGAACTGA nusA 3743179 - 3744687 + | transcription elongation protein (N utilization substance protein A) TERM 4835 3744888 - 3744840 - g 72 -4.6 -4.7908 | gap 1, overlap 3744841 AAAAAGAGAAAGAAA CCTTGCTGGCTTGGTTGAACCGT GATA AAGAGTCAACCA-GCCAACCAGA AAAATTAACGTTACA TERM 4836 3744926 - 3744893 - g 82 -6.1 -4.98857 | gap 1, opp_overlap 3744893 3744892 3744890 3744897 AGCCAACCAGAAAAA TTAACGTTACAGCGCA AAG TGCGTAGTA-CGTTAA GTGTTCCTGGTACAG TERM 4837 3745817 - 3745800 - g 70 -5.5 -4.40037 | AAACAATGATGAAAA TGGGTGC AATG GCAACCA TCAATCAAGTTTTAG TERM 4838 3746830 - 3746815 - g 71 -6.2 -4.24404 | ATCTAAACTGGAAAA CATGTT TGCT AACATG GAAGAAGGTAAAGTT infB 3744710 - 3747460 + | translation initiation factor IF-2 TERM 4839 3747508 - 3747483 - f 90 -9 -4.65895 | opp_overlap 3747484 3747487, overlap 3747484 CGTCTGATTTAAAAA GGAAGGGAGC TTAATG GCTCCCTTCT TATTCCTCTCTTTAT TERM 4840 3747484 - 3747507 + F 100 -13.2 -3.83811 | opp_overlap 3747483 3747484, overlap 3747487 GTCTGATTTAAAAAG GAAGGGAGCT TAAT GGCTCCCTTC TTATTCCTCTCTTTA TERM 4841 3747507 - 3747484 - f 91 -12.5 -3.39216 | opp_overlap 3747484 3747487, overlap 3747483 GTCTGATTTAAAAAG GAAGGGAGC TTAATG GCTCCCTTC TTATTCCTCTCTTTA TERM 4842 3747487 - 3747504 + F 85 -9.1 -4.02163 | opp_overlap 3747484 3747483, overlap 3747484 TGATTTAAAAAGGAA GGGAGCT TAAT GGCTCCC TTCTTATTCCTCTCT rbfA 3747768 - 3748169 + | ribosome-binding factor A TERM 4843 3748949 - 3748935 - g 81 -11.4 -3.05384 | opp_overlap 3748934 3748935 CTGTGGTGCATTTAA CCGCCA TTA TGGCGG GTTACTTAAAACTGG TERM 4844 3748935 - 3748949 + G 79 -11.4 -2.60723 | opp_overlap 3748935, overlap 3748934 CTGTGGTGCATTTAA CCGCCA TTA TGGCGG GTTACTTAAAACTGG truB 3748169 - 3749125 + | tRNA pseudouridine synthase B TERM 4845 3749413 - 3749392 - g 75 -2.9 -5.34555 | opp_overlap 3749397, overlap 3749395 3749397 TCAGAGCACAAAAAA GATCACCAC AGCC GTCGTGGTC TGCTGCGTAAAGTTT rpsO 3749248 - 3749517 + | 30S ribosomal protein S15 TERM 4846 3749539 - 3749554 + F 100 -11.8 -4.46212 | opp_overlap 3749539, overlap 3749520 GAGTTTCAGTGAAAA GGGGCC CGTA GGCCCC TTTTCTACTAGAAAG TERM 4847 3749554 - 3749539 - f 100 -11.8 -4.18494 | opp_overlap 3749539 3749520 GAGTTTCAGTGAAAA GGGGCC CGTA GGCCCC TTTTCTACTAGAAAG TERM 4848 3749894 - 3749904 + G 76 -4.6 -5.10208 | AATGGTTGACATGGA CGGC ACT GCTG TTTTTGTTACCGTTG pnp 3749787 - 3751916 + | polyribonucleotide nucleotidyltransferase TERM 4849 3751922 - 3751960 + F 81 -9.1 -3.8917 | gap 1, opp_overlap 3751922, overlap 3751923 TGCAAATTAATGATA TTCTACTACCGATATCTA GACA TAGGTATCGGTAG-AGAC TTATTATGATTGACA TERM 4850 3751923 - 3751959 + F 90 -12.6 -2.9302 | gap 1, opp_overlap 3751922, overlap 3751922 GCAAATTAATGATAT TCTACTACCGATATCTA GACA TAGGTATCGGTAG-AGA CTTATTATGATTGAC TERM 4851 3752599 - 3752586 - g 72 -3.1 -5.0133 | gap 1, overlap 3752588 GATTCTGCTAAAAAA CAGCTG AAA CAGC-G ATACCTACAGGCGAA TERM 4852 3752598 - 3752588 - g 71 -6.8 -4.13561 | overlap 3752586 TTCTGCTAAAAAACA GCTG AAA CAGC GATACCTACAGGCGA nlpI 3752031 - 3752918 + | lipoprotein TERM 4853 3752949 - 3752973 + F 70 -6.4 -4.30104 | opp_overlap 3752949, overlap 3752946 TTGATCAGTTTGAAA GCCATCATCT GCATA GGATGAGGGC TTGTTTGTTCGTTTA TERM 4854 3753878 - 3753860 - g 78 -3.8 -5.24129 | CGTTCGTACAAAAAA TGCGACCT TAG AAGTAGCA GAAACCTTAGAGCGT TERM 4855 3754263 - 3754251 - g 80 -6.3 -4.72272 | overlap 3754253 CGTCGTCAGGAAAAA TTTGC TCA GCAAA TCGCTCAACAGTTAG TERM 4856 3754474 - 3754448 - g 82 -11.6 -3.17075 | opp_overlap 3754443 3754457 TCGTCGTGAATTTAA CGATCGTGACGA TCG CCGTAACGATCG CGAACGTTCTCCACG TERM 4857 3754834 - 3754800 - g 77 -10.1 -3.35996 | gap 1, opp_overlap 3754791 3754783 3754830, overlap 3754821 3754830 3754833 GATGGTCAGCCACAA GGTGGTCG-TCGCTTT AGTA AAGGCGATCAACCACC ACGCCGTGGTAATGG deaD 3753075 - 3754925 + | cold-shock DEAD box protein A (ATP-dependent RNA helicase) TERM 4858 3754988 - 3754968 - T 100 -14.1 -4.91712 | opp_overlap 3754968 CTGAATTGATAAAAA CCAGTCCAT ACA ATGGACTGG TTTTTTTATAGTATG TERM 4859 3754968 - 3754988 + T 100 -14.1 -5.69473 | opp_overlap 3754968 CTGAATTGATAAAAA CCAGTCCAT ACA ATGGACTGG TTTTTTTATAGTATG PMI3425 3755758 - 3755108 - | hypothetical protein TERM 4860 3755316 - 3755336 + g 73 -5.5 -4.55826 | opp_overlap 3755316 3755314 3755319, overlap 3755328 3755330 TGATTCTGTACAAGA TTATTCACA TCT TGTGAAAAA TTTTCATGTTTTAAA PMI3426 3755945 - 3756907 + | sugare isomerase PMI3427 3756944 - 3757321 + | endoribonuclease PMI3428 3757327 - 3758580 + | MFS-family transporter TERM 4861 3758907 - 3758928 + T 93 -6.6 -5.4251 | opp_overlap 3758907 ATATAAATTGAAAAA CCAGTCAA CAAAAA TTGGCTGG TTTTTTCTATATAAA TERM 4862 3758928 - 3758907 - T 72 -5.1 -4.85433 | opp_overlap 3758907 ATATAAATTGAAAAA CCAGTCAAC AAAA ATTGGCTGG TTTTTTCTATATAAA PMI3429 3759839 - 3759465 - | hypothetical protein PMI3430 3760578 - 3759862 - | two-component system response regulator PMI3431 3762284 - 3760581 - | two-component system sensor kinase PMI3432 3762520 - 3763491 + | HlyD-family secretion protein PMI3433 3763501 - 3764646 + | probable transporter PMI3434 3764646 - 3765809 + | probable transporter TERM 4863 3765867 - 3765838 - f 78 -9.3 -3.41073 | opp_overlap 3765839, overlap 3765836 3765839 3765841 TATGCTAGGTAAATA GGACGGGATTACT GAAA AGTTATCCCGTCT TTTTTATTTTAGTGT TERM 4864 3765866 - 3765839 - f 95 -12.8 -2.64322 | opp_overlap 3765839, overlap 3765838 3765836 3765841 ATGCTAGGTAAATAG GACGGGATTACT GAAA AGTTATCCCGTC TTTTTTATTTTAGTG TERM 4865 3765839 - 3765866 + F 100 -12.8 -5.83211 | opp_overlap 3765838 3765836 3765839 3765841 ATGCTAGGTAAATAG GACGGGATTACT GAAA AGTTATCCCGTC TTTTTTATTTTAGTG TERM 4866 3765864 - 3765841 - f 75 -9.6 -2.86124 | opp_overlap 3765839, overlap 3765839 3765838 3765836 GCTAGGTAAATAGGA CGGGATTACT GAAA AGTTATCCCG TCTTTTTTATTTTAG TERM 4867 3766252 - 3766242 - f 75 -2.6 -5.63857 | opp_overlap 3766242 3766249 AAAAATTTAAAAAAA TTAA TTG TTAA ATTTTAATTAAGTAT PMI3435 3766390 - 3766956 + | fimbrial subunit TERM 4868 3766991 - 3766961 - f 82 -9.9 -3.30816 | opp_overlap 3766963, overlap 3766959 3766957 3766963 AATACGAATAATATA TAGCCTTATACTA TTTTT TAGTATAAGGCTT TTTTACTTTTTTGTG TERM 4869 3766963 - 3766989 + F 100 -12.5 -5.59502 | opp_overlap 3766961 3766959 3766957 3766963 TACGAATAATATATA GCCTTATACTA TTTTT TAGTATAAGGC TTTTTTACTTTTTTG TERM 4870 3766989 - 3766963 - f 90 -12.5 -3.2058 | opp_overlap 3766963, overlap 3766961 3766959 3766957 TACGAATAATATATA GCCTTATACTA TTTTT TAGTATAAGGC TTTTTTACTTTTTTG PMI3436 3767057 - 3767755 + | fimbrial chaperone PMI3437 3767793 - 3770414 + | fimbrial outer membrane usher protein PMI3438 3770418 - 3770960 + | fimbrial subunit PMI3439 3770979 - 3771488 + | fimbrial subunit TERM 4871 3772165 - 3772190 + G 70 -5.7 -4.36433 | gap 1 ACCTATTCCTTTATC TATTTT-TTGTC CTA GACAACAAAATA TTTCTTACTATTTAA PMI3440 3771521 - 3772453 + | fimbrial adhesin TERM 4872 3772499 - 3772467 - T 74 -6.6 -4.26344 | gap 1, opp_overlap 3772467 3772471, overlap 3772471 AGATGTTTATTAAAA TAAAGTGGAATAATA ATTT TATT-TTCCACCTTA TTTAGATTTCAAAAA TERM 4873 3772495 - 3772471 - T 71 -5.2 -4.72007 | gap 1, opp_overlap 3772471 3772467, overlap 3772467 GTTTATTAAAATAAA GTGGAATAATA ATTT TATT-TTCCAC CTTATTTAGATTTCA PMI3441 3773401 - 3772523 - | protease PMI3442 3774411 - 3773416 - | protease TERM 4874 3774161 - 3774174 + g 79 -6.7 -4.58283 | opp_overlap 3774171 GCACCTAAATGAGCC GCCAT ATCA ATGGC TTTTTGCCAGCGTTC PMI3443 3774627 - 3775160 + | lipid carrier protein PMI3444 3775154 - 3775657 + | acetyltransferase PMI3445 3775955 - 3775674 - | hypothetical protein TERM 4875 3775699 - 3775724 + g 93 -7.7 -5.44837 | gap 1, overlap 3775703 TACTGTGCAACGTCT GAAG-GCTGATC AAT GATCAGCTTTTC TTTTTGTATTTTTTT TERM 4876 3775703 - 3775719 + g 100 -10.9 -5.40873 | overlap 3775699 GTGCAACGTCTGAAG GCTGATC AAT GATCAGC TTTTCTTTTTGTATT PMI3446 3776242 - 3776493 + | hypothetical protein TERM 4877 3776540 - 3776584 + F 100 -12.4 -4.65153 | gap 1, opp_overlap 3776532 3776544, overlap 3776532 3776542 AAAGAGACACGCGGT AAGACGCTTGTTTTGGTGATA TAAT TATCACCTAAAC-AGCGTCTC TTTTAGTTTCTATGC TERM 4878 3776542 - 3776582 + F 100 -15 -3.9258 | gap 1, opp_overlap 3776532 3776544, overlap 3776532 3776540 AGAGACACGCGGTAA GACGCTTGTTTTGGTGATA TAAT TATCACCTAAAC-AGCGTC TCTTTTAGTTTCTAT TERM 4879 3776580 - 3776544 - f 89 -11.8 -3.0395 | gap 1, opp_overlap 3776532 3776542 3776540, overlap 3776532 AGACACGCGGTAAGA CGCTTGTTTTGGTGATA TAAT TATCACCTAAAC-AGCG TCTCTTTTAGTTTCT PMI3447 3776609 - 3777049 + | hypothetical protein TERM 4880 3777051 - 3777076 + T 81 -4.1 -5.52384 | GGCAACGTCACTAAG TTACTGCTTAT TGCC AAAAGTAGTAA TTTTTTTGCTCCCAA PMI3448 3777420 - 3777058 - | lipoprotein TERM 4881 3777211 - 3777230 + g 75 -2.8 -5.28176 | overlap 3777212 3777213 ATCCCCACAACGCTC TTTGTCGT CTTT ACGGCAGG TTTTTTCTACATCAC PMI3449 3777811 - 3777602 - | hypothetical protein nrdG 3778302 - 3777838 - | anaerobic ribonucleoside-triphosphate reductase activating protein nrdD 3780445 - 3778307 - | anaerobic ribonucleoside-triphosphate reductase TERM 4882 3778654 - 3778635 - G 77 -8.6 -3.8766 | CCATAGCATATGAAA CCACCATT GGCT AATGGCGG GTAAGGGGCTTCAAA TERM 4883 3779470 - 3779483 + g 71 -5.2 -4.65895 | opp_overlap 3779456 3779458 3779455 3779470, overlap 3779464 3779474 CCAGTTTGGGGAAAA CCGC CGTTTT GCGG TTTTTACCTAAACCC TERM 4884 3780771 - 3780725 - R 89 -11.9 -3.36878 | opp_overlap 3780735 3780740, overlap 3780735 CTCATTTATTGAGAA TATAAAAAAAGCAAAGTGCTC ATAAA GAGTACTTTGCTTCTTTGATA TGACAGGTAGAAAAA TERM 4885 3780735 - 3780761 + r 100 -11.7 -4.04806 | opp_overlap 3780725 3780735, overlap 3780740 GAGAATATAAAAAAA GCAAAGTGCTC ATAAA GAGTACTTTGC TTCTTTGATATGACA TERM 4886 3780761 - 3780735 - R 100 -9.5 -5.84432 | opp_overlap 3780735 3780740, overlap 3780725 GAGAATATAAAAAAA GCAAAGTGCTC ATAAA GAGTACTTTGC TTCTTTGATATGACA tdcF 3781177 - 3780791 - | endoribonuclease TERM 4887 3780907 - 3780897 - G 70 -5.4 -4.41348 | opp_overlap 3780897 TGCTCTTTAAAGAAA GCTT CAT AAGC TGCATTAATAGTACC PMI3453 3781431 - 3781288 - | hypothetical protein pyrI 3781973 - 3781515 - | aspartate carbamoyltransferase regulatory subunit pyrB 3782922 - 3781987 - | aspartate carbamoyltransferase catalytic subunit PMI3456 3783130 - 3782915 - | hypothetical protein TERM 4888 3783003 - 3782987 - G 100 -9.4 -5.92337 | opp_overlap 3782987 ACAGACCAAAAAAAA CCCCTC AATGA GAGGGG TTTTAAAAAATAGCT TERM 4889 3782987 - 3783003 + g 86 -9.4 -4.09864 | opp_overlap 3782987 ACAGACCAAAAAAAA CCCCTC AATGA GAGGGG TTTTAAAAAATAGCT TERM 4890 3783144 - 3783155 + r 70 -4.4 -4.86862 | ATCTTTATCTTACAC GCAA GCGT TTGC TTTTAATTTTTTGCA TERM 4891 3783162 - 3783176 + r 87 -4.4 -5.72207 | AGCGTTTGCTTTTAA TTTTTT GCA AAAAAA TTTTTTTAATTTAAA TERM 4892 3783253 - 3783222 - R 88 -6.8 -5.28315 | gap 1, opp_overlap 3783222 AGAAAAGGCAAAAAA GCACCCTTTGTTTAA TCA TTAAA-AAACGGTGC TTTTGCATGAATATG TERM 4893 3783222 - 3783253 + r 74 -6.8 -4.20531 | gap 1, opp_overlap 3783222 AGAAAAGGCAAAAAA GCACCCTTTGTTTAA TCA TTAAA-AAACGGTGC TTTTGCATGAATATG argI 3784278 - 3783274 - | ornithine carbamoyltransferase chain I TERM 4894 3783621 - 3783607 - G 72 -10 -2.58418 | opp_overlap 3783607, overlap 3783606 3783605 CGTGTAGAGAAAATC GGCGTT TTT AACGCC TTCTGCGACATTTTC TERM 4895 3783607 - 3783621 + g 77 -10 -3.33009 | opp_overlap 3783607 3783606 3783605 CGTGTAGAGAAAATC GGCGTT TTT AACGCC TTCTGCGACATTTTC PMI3458 3784460 - 3784891 + | hypothetical protein TERM 4896 3784975 - 3784939 - T 100 -11 -5.03314 | opp_overlap 3784942 3784944, overlap 3784942 3784944 TTTAGGTGCAAAAAA GAACACCCGCCACAAA TTCTT TTTGTGACGGGTATTT TTTAAATGGCTAATC TERM 4897 3784942 - 3784972 + T 91 -8.3 -5.09895 | opp_overlap 3784942 3784939 3784944, overlap 3784944 AGGTGCAAAAAAGAA CACCCGCCACAAA TTCTT TTTGTGACGGGTA TTTTTTAAATGGCTA TERM 4898 3784972 - 3784942 - T 100 -12.7 -4.62085 | opp_overlap 3784942 3784944, overlap 3784939 3784944 AGGTGCAAAAAAGAA CACCCGCCACAAA TTCTT TTTGTGACGGGTA TTTTTTAAATGGCTA TERM 4899 3784970 - 3784944 - T 100 -13.1 -3.91465 | opp_overlap 3784942 3784944, overlap 3784942 3784939 GTGCAAAAAAGAACA CCCGCCACAAA TTCTT TTTGTGACGGG TATTTTTTAAATGGC TERM 4900 3784944 - 3784970 + T 100 -10.9 -4.17608 | opp_overlap 3784944 3784942 3784939, overlap 3784942 GTGCAAAAAAGAACA CCCGCCACAAA TTCTT TTTGTGACGGG TATTTTTTAAATGGC PMI3459 3785854 - 3784985 - | pirin-like protein TERM 4901 3786142 - 3786107 - R 93 -7 -5.45802 | opp_overlap 3786107 3786110 TTTCCAAAATAAAAA CCACATTCTGCTTTAT AAAA ATAACTCAGAATGTAG TTTATTCATAAAACT PMI3460 3786330 - 3786163 - | lipoprotein TERM 4902 3786700 - 3786682 - R 100 -10.3 -5.60689 | opp_overlap 3786681 3786680 TGAGATAACAAAAAA CCCGCAT TAAAT ATGCGGG CGTTTAGATCTATAC PMI3461 3787254 - 3786745 - | acetyltransferase TERM 4903 3787170 - 3787199 + g 76 -4.3 -5.09895 | gap 1, opp_overlap 3787176, overlap 3787173 CGGCGGAAACTTCTC GA-ATAACGCGTGC AAT GCCGGCGTTATCTC TTTTTTCAATGGCTC TERM 4904 3787549 - 3787568 + r 70 -8 -3.11316 | overlap 3787551 AAAATGTTTTATTTT TAGGTTTA GTGA TAAACCTA TATCTTAAGTAGTAA TERM 4905 3787605 - 3787637 + r 100 -13.6 -3.21747 | opp_overlap 3787607, overlap 3787607 3787613 TAGGTGTTAAAAATA AACTAAAACCCGCA ATCAA TGCGGGTTTTAGTA TTAATGGTGCAATAA TERM 4906 3787607 - 3787635 + r 100 -16.2 -3.17229 | opp_overlap 3787607, overlap 3787605 3787613 GGTGTTAAAAATAAA CTAAAACCCGCA ATCAA TGCGGGTTTTAG TATTAATGGTGCAAT TERM 4907 3787635 - 3787607 - R 100 -16.2 -4.85782 | opp_overlap 3787605 3787607 3787613 GGTGTTAAAAATAAA CTAAAACCCGCA ATCAA TGCGGGTTTTAG TATTAATGGTGCAAT TERM 4908 3787613 - 3787629 + r 91 -9.4 -4.44797 | opp_overlap 3787607, overlap 3787607 3787605 AAAAATAAACTAAAA CCCGCA ATCAA TGCGGG TTTTAGTATTAATGG valS 3790542 - 3787654 - | valyl-tRNA synthetase TERM 4909 3790190 - 3790207 + g 75 -5.5 -4.8143 | overlap 3790192 TCGATGAAAGCATCA CGGCCAT AATC ATGGCGG TTTTTACCTTCTTCA TERM 4910 3790431 - 3790447 + g 82 -3.7 -5.42862 | TGGATGTATCACCAT TGGCT TTAAAGT AGCCA TTTTTTTCCCAATGT holC 3791005 - 3790556 - | DNA polymerase III, chi subunit TERM 4911 3790730 - 3790744 + g 90 -12.8 -3.53012 | opp_overlap 3790728 3790725 AATCAGGAGATCACG CGGGGC ATT GCCCCG TTTGCCCGGCCAACA TERM 4912 3791014 - 3791055 + r 100 -15.5 -2.81937 | gap 1, opp_overlap 3791019 3791024, overlap 3791008 3791015 3791024 TTTTCATGATATCCC GA-TAATAGAAGGGTATTGC ATT GCAATACCCTTCTATGAGTC TGCTCTATTTACCTT TERM 4913 3791015 - 3791053 + r 100 -14.8 -2.94872 | opp_overlap 3791019 3791024, overlap 3791014 3791008 3791024 TTTCATGATATCCCG ATAATAGAAGGGTATTGC ATT GCAATACCCTTCTATGAG TCTGCTCTATTTACC TERM 4914 3791049 - 3791019 - R 100 -20 -3.32521 | opp_overlap 3791015 3791014 3791008 3791024, overlap 3791024 ATGATATCCCGATAA TAGAAGGGTATTGC ATT GCAATACCCTTCTA TGAGTCTGCTCTATT TERM 4915 3791024 - 3791044 + r 100 -14.1 -3.5399 | opp_overlap 3791019 3791024, overlap 3791015 3791014 3791008 ATCCCGATAATAGAA GGGTATTGC ATT GCAATACCC TTCTATGAGTCTGCT TERM 4916 3791044 - 3791024 - R 100 -14.1 -3.75378 | opp_overlap 3791024 3791015 3791014 3791008, overlap 3791019 ATCCCGATAATAGAA GGGTATTGC ATT GCAATACCC TTCTATGAGTCTGCT pepA 3792594 - 3791086 - | cytosol aminopeptidase TERM 4917 3793193 - 3793169 - g 70 -2.8 -5.1615 | opp_overlap 3793173 3793182, overlap 3793170 3793173 GGAATAGGTAAAAAA GCATTAGTGC AAGCA GCACTATTGT TGTCATTACTTACTA PMI3465 3792881 - 3793978 + | permease TERM 4918 3794843 - 3794853 + G 70 -3.2 -4.85782 | CGGTGATGATGCTAA TGGC GCT GTCA TTTATTTTTGGCCCA PMI3466 3793978 - 3795057 + | permease TERM 4919 3795092 - 3795113 + T 100 -8.7 -5.65177 | opp_overlap 3795092 ATGCTTAAAGAAAAA GCGCCTTCA ATAA TCAAGGCGC TTTTTTTATCGGTCT TERM 4920 3795113 - 3795092 - T 95 -8.7 -5.27938 | opp_overlap 3795092 ATGCTTAAAGAAAAA GCGCCTTCA ATAA TCAAGGCGC TTTTTTTATCGGTCT ampH 3796364 - 3795147 - | penicillin-binding protein TERM 4921 3796270 - 3796287 + g 70 -9.9 -2.5664 | opp_overlap 3796267, overlap 3796269 TGATTAAACTTAGCG GGTAACG TTGG CGTTACC GTTGCTCGTTGACTA TERM 4922 3797426 - 3797404 - H 84 -5.6 -5.48213 | TATTTAAAATAAAAA TTCTTCCTTA CAC CAGGGAAGAA AAGGGCAGTGACATT TERM 4923 3797498 - 3797526 + H 100 -7.6 -5.76633 | AATTGCAGTACCGTC GGATCAAAAC ACTAACCCA GTTTTGATCC TTTTTTTATATCTCG TERM 4924 3797935 - 3797950 + H 100 -6.8 -5.76633 | opp_overlap 3797927 3797935 ATAAGAACATCAAGA GACGTC AGCG GGCGTC TTTTTTTGTATCTGA intB 3798109 - 3799374 + | prophage integrase PMI3470 3799990 - 3800259 + | hypothetical protein PMI3471 3800237 - 3801025 + | hypothetical protein PMI3472 3801072 - 3801203 + | hypothetical protein PMI3473 3801359 - 3801553 + | hypothetical protein PMI3474 3801982 - 3803076 + | hypothetical protein TERM 4925 3803161 - 3803135 - g 70 -9.5 -2.52112 | opp_overlap 3803140, overlap 3803134 3803132 3803137 AAAAATATCGAATAT GATGACCCATA TCAGG TATGGGTCTTC GACAATTCCTCTTAT TERM 4926 3803263 - 3803251 - g 83 -3.4 -5.64328 | opp_overlap 3803251 AATAAAAAAAGAAAA TACC ATCAA GGTA TCACTTTTATTAACA PMI3475 3803069 - 3804328 + | hypothetical protein TERM 4927 3804319 - 3804361 + T 100 -13.9 -5.26918 | gap 2, opp_overlap 3804310 3804319 3804322 3804324 3804333 TAATTATTTATTAAG CAAGAGCTAATAAATAGAAGC GAA GCTTCTATTTATT-GC-CTTG TTTTTTCTGCCATAT TERM 4928 3804361 - 3804319 - T 100 -13.9 -2.5194 | gap 2, opp_overlap 3804319, overlap 3804310 3804322 3804324 3804333 TAATTATTTATTAAG CAAGAGCTAATAAATAGAAGC GAA GCTTCTATTTATT-GC-CTTG TTTTTTCTGCCATAT TERM 4929 3804358 - 3804322 - T 80 -9.8 -3.40867 | gap 2, opp_overlap 3804319, overlap 3804310 3804319 3804324 3804333 TTATTTATTAAGCAA GAGCTAATAAATAGAAGC GAA GCTTCTATTTATT-GC-C TTGTTTTTTCTGCCA TERM 4930 3804357 - 3804324 - T 100 -13.5 -3.27297 | gap 1, opp_overlap 3804319, overlap 3804310 3804322 3804319 3804333 ATTTATTAAGCAAGA GCTAATAAATAGAAGC GAA GCTTCTATTTATT-GC CTTGTTTTTTCTGCC TERM 4931 3804349 - 3804333 - T 90 -9.5 -4.254 | opp_overlap 3804319, overlap 3804324 3804322 3804319 GCAAGAGCTAATAAA TAGAAGC GAA GCTTCTA TTTATTGCCTTGTTT PMI3476 3804919 - 3804404 - | hypothetical protein PMI3477 3805436 - 3804960 - | hypothetical protein TERM 4932 3805163 - 3805175 + g 78 -2.7 -5.36314 | CAGAGTTTTCTTTTA GTATT CTG AGTAC TTTTTTAATATTTTC PMI3478 3806774 - 3806544 - | phage regulatory protein PMI3479 3807467 - 3806880 - | hypothetical protein PMI3480 3807957 - 3808724 + | hypothetical protein TERM 4933 3808730 - 3808717 - f 74 -3.9 -5.28683 | ATGAATATGAAAAAA TGAAA TAAA TTTCA AATATATATCATCTA PMI3481 3808777 - 3809640 + | ATP/GTP-binding protein TERM 4934 3809674 - 3809699 + F 100 -13.3 -5.88476 | TATTCATCACTCTCA GCGCCAGTCCT TAAC GGGATTGGCGC TTTTTTATTTCTTTT PMI3482 3809732 - 3810157 + | plasmid-related antirestriction protein PMI3483 3810172 - 3811008 + | plasmid-related protein PMI3484 3811220 - 3811927 + | hypothetical protein TERM 4935 3812050 - 3812038 - g 70 -9.1 -3.14344 | GATTGCGGTCATGAA TGGGC CAT GCCCA TTCAAAATCACCCTC PMI3485 3811924 - 3812100 + | hypothetical protein PMI3486 3812105 - 3812566 + | hypothetical protein TERM 4936 3812688 - 3812700 + F 82 -7.7 -4.45693 | opp_overlap 3812687 3812688 ACGGTGTTCATAAAG CGTCA ATC TGACG TTTCTATTTATGTTG PMI3487 3812729 - 3812926 + | hypothetical protein PMI3488 3812971 - 3813216 + | hypothetical protein TERM 4937 3813258 - 3813218 - f 74 -6.1 -4.51994 | overlap 3813221 CCAATCAACAATAAA TAACATTCTCGCTGCCG TCACTTG CGGTAGCGAGGACGATA AAAGATAACAAAAGG TERM 4938 3813255 - 3813221 - f 80 -7.8 -4.34486 | overlap 3813218 ATCAACAATAAATAA CATTCTCGCTGCCG TCACTTG CGGTAGCGAGGACG ATAAAAGATAACAAA PMI3489 3813446 - 3813778 + | hypothetical protein PMI3490 3813809 - 3814243 + | hypothetical protein TERM 4939 3816360 - 3816348 - g 76 -3.3 -5.18371 | CGCTATAAAATAAAA GTGCT GGA AGCTC ACGATGTTAAAAAAA PMI3491 3814944 - 3816527 + | plasmid-related protein TERM 4940 3816632 - 3816646 + T 82 -8.6 -4.05788 | TCAGGTCGGGTTAAT GCCTTT AGT AAAGGC TTTGGTTTACCGCAG PMI3492 3817013 - 3816783 - | hypothetical protein PMI3493 3817226 - 3817050 - | hypothetical protein TERM 4941 3817595 - 3817610 + H 100 -9 -5.76633 | opp_overlap 3817587 ATAAGAACATCGAGG GACGTC AACG GACGTC TTTTTTTGTATCTGA TERM 4942 3818343 - 3818321 - H 100 -7.8 -5.71983 | opp_overlap 3818321 TTAATTATAAAAAAA CATGTTCC ATAATTG GGAACATG TTGATAGTTTATCAT PMI3495 3818322 - 3818675 + | hypothetical protein PMI3496 3818665 - 3819873 + | hypothetical protein TERM 4943 3819974 - 3819986 + G 79 -3.3 -5.44119 | opp_overlap 3819970 3819961 3819974, overlap 3819970 3819961 AAGGTAAATATGCAA GTGCA ATT TGCCC TTTTTTTGAAATACC PMI3497 3819892 - 3821031 + | hypothetical protein PMI3500 3822818 - 3822084 - | hypothetical protein TERM 4944 3822697 - 3822676 - G 72 -4.5 -4.77122 | overlap 3822696 TTATATAAAAAATAA TCTCTAATG ATGC CACTAAAGA GAAAAACATCATTTT PMI3501 3824308 - 3822824 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 4945 3823963 - 3823977 + g 72 -4.3 -4.81551 | GGTTTCCAATATCGT GTAGT AAACA ACTAC TTTTTAATATCACTG PMI3507 3827900 - 3825382 - | hypothetical protein TERM 4946 3825591 - 3825572 - GRH 95 -10.6 -4.18094 | opp_overlap 3825561 3825572 CAAAGCACCGTAAAA CCCCGTCC TTCA GGTCGGGG ATATAAGGGCGCGGT TERM 4947 3825572 - 3825605 + grH 72 -3.1 -5.08824 | gap 1, opp_overlap 3825572, overlap 3825561 CAAAGCACCGTAAAA CCCCGTCCTTCAGGTC GGG GATAT-AAGGGCGCGG TTTTTTAACTAACGA PMI3505 3826093 - 3825614 - | IS element transposase TERM 4948 3826677 - 3826664 - GgH 71 -8.1 -3.28001 | CAGTTTTAAAGTCAA CCAGC GAAA GCTGG CAAGGCTTCAACGGA PMI3506 3826053 - 3827252 + | transposase TERM 4949 3828020 - 3828032 + FH 72 -4.9 -4.76088 | TTAATTATTCATATC TGTTA TAA TAACA TTGTTTTTTAATTTC PMI3508 3828735 - 3828992 + | transcriptional regulator TERM 4950 3829431 - 3829451 + T 74 -6.8 -4.30161 | opp_overlap 3829431, overlap 3829426 TTATTAGTCAGTTAA GCCACGAT TTAAT AACGTGGC TTTAGTTTTATATGA prfH 3830079 - 3829468 - | probable peptide chain release factor PMI3510 3831227 - 3830079 - | hypothetical protein deoR 3832258 - 3831482 - | deoxyribose operon repressor deoC 3832982 - 3832314 - | deoxyribose-phosphate aldolase TERM 4951 3833435 - 3833445 + G 73 -6.8 -4.17914 | CCCGGAACCACCAGC GGTG TTG CACC TATTTTTGTTACCTC deoK 3833162 - 3834082 + | deoxyribokinase TERM 4952 3834108 - 3834133 + F 100 -11.9 -4.33417 | GCCATACCTCTCACA GCTCTCCTGTT TAAA ATCAGGAGAGC TTTATTATCAATAAG PMI3514 3834299 - 3835213 + | phosphosugar binding/isomerase TERM 4953 3835505 - 3835484 - g 74 -8.9 -3.54459 | GGAACGGCCGCCAAA GTTTATTCA ATCA TGAATAAAC GTATGCAAAAAAACA PMI3515 3835253 - 3836617 + | PTS system EIIBC component PMI3516 3836649 - 3837500 + | phosphosugar-binding transcriptional regulator TERM 4954 3837725 - 3837750 + G 72 -3.2 -5.03747 | opp_overlap 3837725, overlap 3837728 AAACGAGCCATGATA GTCCTCGGCA TTATGT TGCCAAGTAC TTTTTTAGCGAGTTT TERM 4955 3837834 - 3837848 + G 81 -2.8 -5.53079 | overlap 3837831 GGATTAATGCGCTGG TGGTGG CTG CCATTA TTTTTTCTCTCTTTT TERM 4956 3837868 - 3837880 + G 85 -2.7 -5.80364 | TTCTCTCTTTTTGTT TATTC AAA GAATG TTTTTTTCTTCACCT PMI3517 3837500 - 3838288 + | hypothetical protein ivbL 3838524 - 3838622 + | ilvBN operon leader peptide TERM 4957 3838650 - 3838676 + F 100 -10.1 -4.84527 | gap 1 AACACAGTTTCGCAA CCCCGCCGGCGT ATTA AC-CGGGCGGGG TTTTTCATATCTACC ilvB 3838730 - 3840424 + | acetolactate synthase isozyme I large subunit ilvN 3840428 - 3840712 + | acetolactate synthase isozyme I small subunit PMI3521 3841663 - 3840767 - | cation efflux protein TERM 4958 3841614 - 3841586 - G 71 -7.6 -3.85857 | gap 1 AATCACCATAAAAGA GCCTGTTAA-TGC AAAA GCAATTAACAGAC GTGATTCAGGTAGCG PMI3522 3842318 - 3841740 - | transcriptional regulator PMI3523 3842557 - 3843744 + | MFS-family transporter TERM 4959 3843750 - 3843785 + F 79 -9.9 -2.8867 | overlap 3843749 TACATCATAATTGCA TGCTCTTTTTTACCT TATTGT AGGTAAAAGAGGGCG CTATTTTCATTAAAT TERM 4960 3844234 - 3844260 + F 81 -4.6 -5.49579 | gap 1, opp_overlap 3844234 AAAACAGTTTAACCA GAGGAGAAATA TATCAC TATT-CTCCTC TTTTCTTTTTTCTGC TERM 4961 3844943 - 3844967 + G 72 -3.6 -5.1166 | gap 1, overlap 3844945 GATTGGTATCGCTCA TGGCGCCGGTA TTGG TATCGG-GCTA TTTTTACTTTTGATC PMI3524 3844515 - 3845861 + | permease TERM 4962 3845918 - 3845882 - f 87 -10.5 -3.58522 | gap 1, opp_overlap 3845882 3845890, overlap 3845890 ATCATCAGGTTTAAA CATAAAAAGCGGAATA TATTTT TATTCCGCTTTTT-TG CTATTTATTTATCTA TERM 4963 3845882 - 3845918 + F 81 -10.5 -2.94105 | gap 1, opp_overlap 3845882 3845890, overlap 3845890 ATCATCAGGTTTAAA CATAAAAAGCGGAATA TATTTT TATTCCGCTTTTT-TG CTATTTATTTATCTA TERM 4964 3845911 - 3845890 - f 95 -8.8 -5.19879 | opp_overlap 3845882 3845890, overlap 3845882 GTTTAAACATAAAAA GCGGAATA TATTTT TATTCCGC TTTTTTGCTATTTAT TERM 4965 3845890 - 3845911 + F 100 -8.8 -5.34055 | opp_overlap 3845890 3845882, overlap 3845882 GTTTAAACATAAAAA GCGGAATA TATTTT TATTCCGC TTTTTTGCTATTTAT PMI3525 3845989 - 3846492 + | acetyltransferase PMI3526 3846850 - 3848499 + | Na(+)/H(+) exchanger TERM 4966 3848926 - 3848946 + GT 71 -4.8 -4.64676 | TCTGGCTGGGATTAT TATTGGTT CAGTT AGCCAATA TTTTCTTCGCCATAG metR 3850242 - 3849289 - | LysR-family transcriptional regulator PMI3527 3848502 - 3849374 + | hypothetical protein metE 3850350 - 3852623 + | 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase TERM 4967 3852648 - 3852684 + F 100 -13.3 -5.95946 | AATAATATATTTTAG TAGCCTGTTATTTTGAT GTT ATCAATATAATAGGCTA TTTTTTTCTTATTAA TERM 4968 3852745 - 3852731 - f 71 -2.9 -5.31519 | opp_overlap 3852731 3852738, overlap 3852738 ATAGGTAAATAAAAA TAAGA GATAA TCTTA TTATTGATATTTTTT PMI3530 3852792 - 3853619 + | hypothetical protein TERM 4969 3853717 - 3853661 - T 71 -6.8 -4.0942 | gap 2, opp_overlap 3853664 3853667, overlap 3853665 GATTGATTATAGAAA GCAAGATGGCTATTGCGCTTGATTGGTT AAG AAACAAT-A-GCGCCATAGCCATCATTC AATTTATTAGCCACC TERM 4970 3853713 - 3853665 - T 87 -10.6 -3.66365 | gap 2, opp_overlap 3853664 3853667, overlap 3853661 GATTATAGAAAGCAA GATGGCTATTGCGCTTGATTGGTT AAG AAACAAT-A-GCGCCATAGCCATC ATTCAATTTATTAGC PMI3531 3854116 - 3853724 - | hypothetical protein udp 3854459 - 3855217 + | uridine phosphorylase TERM 4971 3855274 - 3855233 - f 77 -7.5 -4.05788 | opp_overlap 3855240, overlap 3855240 GTTTTCTAAATGAAA TACTAAAGCCTTTAATACA TTGG TGTATTAAAGGCTTTTTTT GTGCGGTAATTCATC TERM 4972 3855240 - 3855267 + F 100 -14.4 -5.626 | opp_overlap 3855233 3855240 AAATGAAATACTAAA GCCTTTAATACA TTGG TGTATTAAAGGC TTTTTTTGTGCGGTA TERM 4973 3855267 - 3855240 - f 100 -14.4 -4.05229 | opp_overlap 3855240, overlap 3855233 AAATGAAATACTAAA GCCTTTAATACA TTGG TGTATTAAAGGC TTTTTTTGTGCGGTA PMI3533 3855367 - 3856149 + | hypothetical protein TERM 4974 3856423 - 3856435 + G 89 -4.7 -5.58074 | overlap 3856424 CAATTTGGCTTGCTG CCGCC CTA GGCGC TTTTTTTGGTGATTG TERM 4975 3856424 - 3856434 + G 73 -8.2 -3.93218 | overlap 3856423 AATTTGGCTTGCTGC CGCC CTA GGCG CTTTTTTTGGTGATT PMI3534 3856221 - 3856751 + | hypothetical protein TERM 4976 3857697 - 3857685 - g 76 -3.3 -5.2204 | GAGAATGAACAAAAA CAAGC GCT GCATG CTCATGTGAACTCTA TERM 4977 3858168 - 3858152 - g 89 -5.9 -5.36441 | opp_overlap 3858152 GGTTGAGATAAAAAA GACCATT GAT AATGATC TGGTTGAAAAATCAG rumC 3856854 - 3858194 + | DNA recombination protein TERM 4978 3858190 - 3858180 - f 71 -5.4 -4.57073 | opp_overlap 3858168 3858171 3858180 GATCTGGTTGAAAAA TCAG CTT CTGA TTGATTTACATAAAT TERM 4979 3858361 - 3858339 - g 77 -4.8 -4.96106 | opp_overlap 3858343, overlap 3858343 GACAAAGATGAAAAA CAAACCATGG TGG CCAAGGTTTT TCACTCTGTTGCATC TERM 4980 3858357 - 3858343 - g 79 -5.6 -4.95618 | opp_overlap 3858343, overlap 3858339 AAGATGAAAAACAAA CCATGG TGG CCAAGG TTTTTCACTCTGTTG TERM 4981 3858343 - 3858357 + G 75 -5.6 -4.74453 | opp_overlap 3858343 3858339 AAGATGAAAAACAAA CCATGG TGG CCAAGG TTTTTCACTCTGTTG ubiE 3858276 - 3859031 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4982 3859173 - 3859147 - g 82 -10.9 -3.57309 | opp_overlap 3859138 3859147, overlap 3859148 GAAAATGTGCTTAAA CCTGCCCGCAA TCGCC TTGCGGGCAAA GTCTTGGCGCTTTCT TERM 4983 3859172 - 3859148 - g 81 -12.2 -2.73903 | opp_overlap 3859147 3859138, overlap 3859147 AAAATGTGCTTAAAC CTGCCCGCAA TCGCC TTGCGGGCAA AGTCTTGGCGCTTTC PMI3537 3859033 - 3859674 + | hypothetical protein ubiB 3859674 - 3861311 + | probable ubiquinone biosynthesis protein tatA 3861437 - 3861703 + | sec-independent protein translocase tatB 3861707 - 3862237 + | Sec-independent protein translocase TERM 4984 3862430 - 3862440 + G 81 -5.4 -5.00884 | opp_overlap 3862416, overlap 3862416 ATGAGTGCGACTGAT GTTG CCT CAAC TTTTTTGACACCGAT tatC 3862241 - 3863026 + | sec-independent protein translocase TERM 4985 3863060 - 3863085 + T 95 -10.5 -4.57073 | opp_overlap 3863057 3863054 3863061 3863065, overlap 3863061 CTAAAAACATAATTT ATTAACCCAGC TAAG GCTGGGTTAAC TTTTTAGAAAGGCTC TERM 4986 3863084 - 3863061 - T 100 -14 -2.72746 | opp_overlap 3863060 3863061, overlap 3863057 3863054 3863065 TAAAAACATAATTTA TTAACCCAGC TAAG GCTGGGTTAA CTTTTTAGAAAGGCT TERM 4987 3863061 - 3863084 + T 100 -14 -3.33922 | opp_overlap 3863061 3863057 3863054 3863065, overlap 3863060 TAAAAACATAATTTA TTAACCCAGC TAAG GCTGGGTTAA CTTTTTAGAAAGGCT TERM 4988 3863080 - 3863065 - T 83 -10.4 -3.24827 | opp_overlap 3863061 3863060, overlap 3863061 3863057 3863054 AACATAATTTATTAA CCCAGC TAAG GCTGGG TTAACTTTTTAGAAA rfaH 3863589 - 3863089 - | transcriptional activator PMI3543 3864984 - 3863776 - | transposase PMI3544 3865007 - 3865423 + | transposase TERM 4989 3865434 - 3865475 + F 87 -10.7 -3.6682 | opp_overlap 3865433 3865434, overlap 3865445 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAAATGCAG TERM 4990 3865445 - 3865464 + F 95 -10.6 -4.18094 | opp_overlap 3865434 3865433, overlap 3865434 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG TERM 4991 3866284 - 3866268 - g 75 -8.1 -4.11751 | opp_overlap 3866267, overlap 3866278 ATGAAGGCTTTAAAA TTTTCCA ACA TGGAAAA ACTTTTCCAGAACAA TERM 4992 3866318 - 3866338 + G 72 -8.3 -3.58864 | overlap 3866316 GATACAAAAATGTTG GCAAAATGG GTT CCATTTCGC TGTTTATAATAATAA pepE 3865622 - 3866347 + | dipeptidase E TERM 4993 3866434 - 3866420 - f 90 -11.4 -3.55071 | opp_overlap 3866420 TTATAGTGTTTCAAA GAGGGC TTT GCCCTC TTTTCTCTCACTCAC TERM 4994 3866420 - 3866434 + F 100 -11.4 -4.55287 | opp_overlap 3866420 TTATAGTGTTTCAAA GAGGGC TTT GCCCTC TTTTCTCTCACTCAC ubiD 3866467 - 3867936 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase fadI 3867952 - 3868653 + | NAD(P)H-flavin reductase TERM 4995 3868736 - 3868719 - T 100 -9.8 -5.77632 | AAAACCATAAAAAAA CCCGCC CCTGAC GGCGGG AAAATGGTTAAAAAA fadA 3869972 - 3868809 - | 3-ketoacyl-CoA thiolase fadB 3872164 - 3869984 - | fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] TERM 4996 3870396 - 3870416 + g 70 -3.3 -4.84359 | CGCTTATCAATAGTG TAGTCATAG AAC CCATGATTA TTTTTCTGACCATAG TERM 4997 3871359 - 3871384 + g 100 -11.9 -5.03405 | opp_overlap 3871357 GTTTCCAATTCAAGT GCCGCTTTTCT ATCT AGAAATGCGGC TTTTTCTATCGTATT TERM 4998 3872200 - 3872188 - H 77 -7.7 -4.13654 | opp_overlap 3872187 TCCCTAAAGTATAAA CTGGT ATG ACCAG ATAATTAGAGTGTGA pepQ 3872453 - 3873787 + | Xaa-Pro dipeptidase PMI3552 3873787 - 3874407 + | hypothetical protein TERM 4999 3874969 - 3874953 - g 74 -4.3 -4.95302 | overlap 3874965 TGAAAGACAATAAAA TGCGCCC AAG GATCGCA GAAACTGCGAAAGCA TERM 5000 3874979 - 3874965 - g 72 -10 -2.7186 | overlap 3874953 AAATGCGCCCAAGGA TCGCAG AAA CTGCGA AAGCATTGTGGCTGA trkH 3874433 - 3875884 + | Trk system potassium uptake protein hemG 3875905 - 3876435 + | protoporphyrinogen oxidase TERM 5001 3876617 - 3876606 - T 81 -3 -5.8901 | opp_overlap 3876606, overlap 3876594 AGAGAAAAGAAAAAA GTTT GAAA AAAC TCTTGACTCTTCAGA TERM 5002 3878364 - 3878381 + T 74 -9.1 -3.07291 | opp_overlap 3878364 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 5003 3879050 - 3879064 + T 71 -8.6 -2.92371 | opp_overlap 3879047 3879050 GAATGGGGAAACCCA GTATCC AAT GGATAC TATCATTAACTGAAT TERM 5004 3879413 - 3879401 - T 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5005 3880384 - 3880366 - T 87 -10.3 -3.57798 | overlap 3880379 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 5006 3882261 - 3882243 - T 100 -14.6 -4.11081 | opp_overlap 3882243 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCGTTTGAA TERM 5007 3882243 - 3882261 + T 100 -14.6 -5.22039 | opp_overlap 3882243 AAATAAGACGAGAAA GCCAACCC AAT GGGTTGGC TTTTTTGCGTTTGAA PMI3555 3883002 - 3882343 - | GntR-family transcriptional regulator TERM 5008 3883181 - 3883231 + H 75 -8.4 -3.7035 | opp_overlap 3883180 3883183, overlap 3883180 3883193 TTTGATGCCAAAATG TATGCACCAATTTTGCGCATAA CTCTTTT TTATGCGCTATTTTGGGGCATA TCTATTTTTTACTCT PMI3556 3883493 - 3884725 + | hypothetical protein PMI3557 3884739 - 3885524 + | hypothetical protein TERM 5009 3885599 - 3885611 + F 74 -5.5 -4.75308 | GGCAATAAAAGGGAG GCGTA TTT TGCGC TTTTTACCTGTTAAT TERM 5010 3886623 - 3886600 - g 71 -7.4 -3.83998 | overlap 3886601 3886603 GTAGTGGAGATGAAA TCACTGTAGG GATA CCTACAGCGG GGATTCGTAGTTATC TERM 5011 3886622 - 3886601 - g 77 -10.9 -2.90078 | overlap 3886600 3886603 TAGTGGAGATGAAAT CACTGTAGG GATA CCTACAGCG GGGATTCGTAGTTAT TERM 5012 3886620 - 3886603 - g 72 -9.9 -2.99871 | overlap 3886601 3886600 GTGGAGATGAAATCA CTGTAGG GATA CCTACAG CGGGGATTCGTAGTT PMI3558 3885606 - 3887183 + | allophanate hydrolase TERM 5013 3888316 - 3888304 - g 75 -10.5 -3.10112 | opp_overlap 3888301, overlap 3888290 AGCCAATTTAGTCAA CCGGC TGG GCCGG GCGTTCGTGTTGATA TERM 5014 3888869 - 3888853 - g 77 -10.9 -2.84988 | opp_overlap 3888855, overlap 3888850 ATGAAAATGGAAGTA CAGGTAG TTG CTACCTG TCATGGTGTATTGCA PMI3559 3887200 - 3888945 + | bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] TERM 5015 3888992 - 3888973 - f 85 -10.8 -3.19642 | opp_overlap 3888973 ACTATTATCGAGTAA GCCTCTTA GCAA TAAGAGGC TTTTTTATAATAACC TERM 5016 3888973 - 3888992 + F 100 -10.8 -5.31275 | opp_overlap 3888973 ACTATTATCGAGTAA GCCTCTTA GCAA TAAGAGGC TTTTTTATAATAACC PMI3560 3889105 - 3889902 + | hypothetical protein PMI3561 3889971 - 3890270 + | hypothetical protein TERM 5017 3891233 - 3891222 - g 70 -3 -5.07275 | opp_overlap 3891222 CTATACATATAAAAA GATT ATAT AATC CTGGTTTTTGTGGGT PMI3562 3890267 - 3891655 + | radical SAM superfamily protein PMI3563 3891648 - 3892757 + | radical SAM superfamily protein PMI3564 3892754 - 3893302 + | hypothetical protein PMI3565 3893311 - 3893553 + | hypothetical protein TERM 5018 3893572 - 3893547 - T 89 -12 -3.1082 | opp_overlap 3893550, overlap 3893550 TATTTATCCAATAGA GAAGTGATCG AAATAA CGATCACTTC TACATCACTTTATTA TERM 5019 3893569 - 3893550 - T 73 -7.9 -3.69482 | opp_overlap 3893550, overlap 3893547 TTATCCAATAGAGAA GTGATCG AAATAA CGATCAC TTCTACATCACTTTA TERM 5020 3893550 - 3893569 + T 71 -7.9 -3.38564 | opp_overlap 3893550 3893547 TTATCCAATAGAGAA GTGATCG AAATAA CGATCAC TTCTACATCACTTTA PMI3566 3894025 - 3893585 - | hypothetical protein PMI3567 3894136 - 3895038 + | LysR-family transcriptional regulator narL 3895688 - 3895035 - | nitrate/nitrite two-component system, response regulator TERM 5021 3895457 - 3895436 - G 71 -7.3 -3.89041 | gap 1, opp_overlap 3895450, overlap 3895451 ATACACTAAACACAA CGATCCGCCC AGA GAGCG-ATCG TAATCGCAATTGATC narX 3897519 - 3895690 - | nitrate/nitrite teo-component system, sensor kinase TERM 5022 3897165 - 3897177 + g 70 -5.5 -4.43864 | TAGGCTGTTTGGCTG CTGAC AAA GTCGG TTTTAATGTCTCTTT TERM 5023 3897744 - 3897725 - H 78 -5.8 -4.81551 | GATTTAGATGAAAAA TCAAACAA AATC TTGCTTGA TGCAGATCATGACTC narK 3897814 - 3899205 + | nitrite extrusion protein (MFS-family transporter) TERM 5024 3900383 - 3900373 - g 79 -5.4 -4.93296 | CGATCAGGAGAAAAA TCCA GAA TGGA AAACCATTGCTATTG narG 3899261 - 3903022 + | respiratory nitrate reductase 1 alpha chain TERM 5025 3903901 - 3903886 - g 70 -3.3 -4.93365 | GCTGATAATGAAAAA GACTT ATACCA AAGTC AATTAGATATCTTTT narH 3903022 - 3904575 + | respiratory nitrate reductase 1 beta chain narJ 3904575 - 3905300 + | respiratory nitrate reductase 1 delta chain narI 3905297 - 3905974 + | respiratory nitrate reductase 1 gamma chain TERM 5026 3906025 - 3906040 + F 100 -11.8 -5.86332 | ATTGCGCTTATCTCA CCCCCG CCCG CGGGGG TTTTTTTTAACTTAA TERM 5027 3906164 - 3906191 + F 77 -8.8 -3.76289 | TAAAATGTCATTATG TTATTTAAATAT CATG ATATTTAAATAA TTATATATATTTTCC PMI3575 3906382 - 3907575 + | oxidase TERM 5028 3907605 - 3907630 + T 100 -10.5 -5.1963 | opp_overlap 3907605 CTCAGCGAGTAAAAA CCCCATGCTTA ATCT TAAACATGGGG TTTTTATTGATTAGA TERM 5029 3907630 - 3907605 - T 100 -12.7 -4.7497 | opp_overlap 3907605 CTCAGCGAGTAAAAA CCCCATGCTTA ATCT TAAACATGGGG TTTTTATTGATTAGA PMI3576 3909343 - 3907652 - | sulfatase TERM 5030 3908390 - 3908408 + g 77 -6 -4.55721 | AATATTGTTCTCTTT TAACGTTC GCT GATCGTTA TTTTCTGTACCGTTT fdhF 3909884 - 3912028 + | formate dehydrogenase-H, selenopolypeptide subunit TERM 5031 3912063 - 3912097 + T 100 -8 -5.68039 | gap 1, opp_overlap 3912063 TTTTCTGTTCGAAAA CCGAGCATGACTGAT CTAGAT ATCAGTAA-GCTCGG TTTTTTTATCGCTTT TERM 5032 3912097 - 3912063 - T 79 -8 -4.07568 | gap 1, opp_overlap 3912063 TTTTCTGTTCGAAAA CCGAGCATGACTGAT CTAGAT ATCAGTAA-GCTCGG TTTTTTTATCGCTTT PMI3579 3913004 - 3912117 - | hypothetical protein TERM 5033 3913138 - 3913163 + r 80 -7.7 -4.16943 | opp_overlap 3913138 ATGGACAGAAAAAAA CGAGTGTAA CAAATTAA TTACACTCG TTTTACAATATCGGC TERM 5034 3913163 - 3913138 - R 100 -8.4 -5.72616 | opp_overlap 3913138 ATGGACAGAAAAAAA CGAGTGTAAC AAATTA ATTACACTCG TTTTACAATATCGGC fhlA 3914808 - 3913195 - | formate hydrogenlyase transcriptional activator TERM 5035 3914353 - 3914375 + g 77 -10.6 -2.79492 | opp_overlap 3914365, overlap 3914352 ACTACTTATTTCATG CGCTAGGATT AAT AAACCTAGCG GTTTACGGTTAAAAG TERM 5036 3914873 - 3914883 + H 71 -5.4 -4.72272 | opp_overlap 3914873 ATAAATTTATATCAA TGAC TGA GTCA TTTTTGATCCAAACC TERM 5037 3915114 - 3915087 - H 72 -5 -4.75174 | gap 1, opp_overlap 3915094, overlap 3915092 TAGTTAATTTAAAAA TAGAT-TGGCATG AAC CATGCTATATCTA ATATATAGATACCTA TERM 5038 3915643 - 3915673 + G 72 -9.1 -3.38297 | gap 1, overlap 3915668 CCGTGCTGAAGGTCC TGCTTGTGTTGAGG TCTG CC-CAACGCAGGCA TTAGTCTGTATTGAT hydN 3915209 - 3915766 + | electron transport protein hybF 3915840 - 3916181 + | probable hydrogenase nickel incorporation protein hypC 3916190 - 3916480 + | hydrogenase formation protein TERM 5039 3916560 - 3916545 - f 80 -10.4 -2.73124 | opp_overlap 3916545 3916557, overlap 3916544 TTTCACTTTTCAAAG GCTGGG ACGA CCCAGC TTTTTAATCTGTATA TERM 5040 3916545 - 3916560 + F 100 -10.4 -4.86133 | opp_overlap 3916545 3916544, overlap 3916557 TTTCACTTTTCAAAG GCTGGG ACGA CCCAGC TTTTTAATCTGTATA TERM 5041 3916585 - 3916609 + F 76 -7.1 -4.21811 | overlap 3916579 3916588 TGTATATTCAGGGGA CGACCCCAATT ATC AATAGGGGTAG TTTATGTCTTGGATA sugE 3916613 - 3916927 + | quaternary ammonium compound-resistance protein TERM 5042 3916956 - 3916982 + T 91 -8 -4.99043 | opp_overlap 3916961, overlap 3916961 GCAGTTTAGCGATAA AAAAAGCCACTC AAT GAGTGGCTTTAA TTTTATTTATCAAGC TERM 5043 3916977 - 3916961 - T 100 -12.3 -5.64274 | opp_overlap 3916956 3916961 TTAGCGATAAAAAAA GCCACTC AAT GAGTGGC TTTAATTTTATTTAT TERM 5044 3916961 - 3916977 + T 100 -12.3 -4.39227 | opp_overlap 3916961, overlap 3916956 TTAGCGATAAAAAAA GCCACTC AAT GAGTGGC TTTAATTTTATTTAT frdD 3917359 - 3917000 - | fumarate reductase subunit D frdC 3917769 - 3917374 - | fumarate reductase subunit C frdB 3918509 - 3917784 - | fumarate reductase iron-sulfur protein frdA 3920310 - 3918514 - | fumarate reductase flavoprotein subunit TERM 5045 3920556 - 3920544 - H 79 -3.4 -5.626 | TATTTCACAAAAAAA GTGT GATCT ACAC CAAGAATTCTCGGTT TERM 5046 3921226 - 3921242 + H 70 -4.3 -4.88163 | TCTGTTGAAGAGGAT GCGAGTA AAC TGCACGC TTTGTTTTCTGTTGG poxA 3921270 - 3922247 + | lysyl-tRNA synthetase TERM 5047 3922272 - 3922287 + T 80 -5.4 -5.22312 | opp_overlap 3922272 3922265 TAATCAGATTAAAAA GAGAGT TTAG GCTCTC TTTTTTAATATGAAT TERM 5048 3922287 - 3922272 - T 72 -4.7 -4.84274 | opp_overlap 3922272, overlap 3922265 TAATCAGATTAAAAA GAGAG TTTAGG CTCTC TTTTTTAATATGAAT TERM 5049 3922496 - 3922464 - T 95 -11.5 -3.78409 | GCAACTCAAGGGAAA TTATCCTGCCCTT TATTGAT AAGAGCAGGATAA CAGAAATAAAGGTTA glpQ 3923588 - 3922509 - | glycerophosphoryl diester phosphodiesterase TERM 5050 3923643 - 3923674 + r 79 -6.6 -4.59773 | opp_overlap 3923647, overlap 3923647 TACAGTTGGCAATAA AAAAGCCACATCAG AAAG TTGATGTGGCTTGA TTTTTAGAGATGAGA TERM 5051 3923647 - 3923670 + r 100 -11.8 -3.81256 | opp_overlap 3923647, overlap 3923643 GTTGGCAATAAAAAA GCCACATCAG AAAG TTGATGTGGC TTGATTTTTAGAGAT TERM 5052 3923670 - 3923647 - R 100 -11.1 -5.4505 | opp_overlap 3923647 3923643 GTTGGCAATAAAAAA GCCACATCA GAAAGT TGATGTGGC TTGATTTTTAGAGAT glpT 3925074 - 3923722 - | glycerol-3-phosphate transporter (MFS-family transporter) TERM 5053 3923921 - 3923937 + g 100 -13.7 -5.02074 | AGACCGGTGAAGCCT GCTGCGG TAC CCGCAGC TTTTTTCGGCGCTAA TERM 5054 3924491 - 3924471 - G 81 -11.9 -2.82156 | overlap 3924464 3924463 ATGCAAACGCAATCA TCGCGACTA AAA TAGCCGCGA ATGCTGGCATATATA glpA 3925455 - 3927113 + | anaerobic glycerol-3-phosphate dehydrogenase subunit A glpB 3927103 - 3928410 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 5055 3929113 - 3929101 - g 76 -2 -5.36441 | opp_overlap 3929111, overlap 3929111 CTCTGACAGAAAAAA TTGT GGAGA ACAA CATTCCGGTTGTTGC glpC 3928407 - 3929600 + | anaerobic glycerol-3-phosphate dehydrogenase subunit C TERM 5056 3929656 - 3929682 + T 100 -12.5 -5.59655 | opp_overlap 3929654 3929653 AATAACAAGCAATTT GGGAATAAAAG TCGAT CTTTTATTCCC TTTTTTATTACTTTA TERM 5057 3929706 - 3929743 + T 84 -9.9 -3.42581 | gap 1, opp_overlap 3929716 3929718 3929727 TACTTTACATCACAT TGTGAGTCAACAGGGTAC AGA GCACCCTGTTGGCGC-CA TTAATATTAATCTTT TERM 5058 3929734 - 3929716 - T 84 -11 -3.06501 | opp_overlap 3929706, overlap 3929718 3929727 CACATTGTGAGTCAA CAGGGTAC AGA GCACCCTG TTGGCGCCATTAATA gldA 3930860 - 3929757 - | glycerol dehydrogenase TERM 5059 3931135 - 3931160 + r 73 -7.7 -3.62046 | opp_overlap 3931130 3931135 GTAAAAGTAAGCTAA GGCTTTATTGT GCAA AGAATAAAGCC TTATTGGGGGAGTCA PMI3596 3931855 - 3931181 - | hypothetical protein TERM 5060 3931427 - 3931441 + g 81 -5.7 -5.17744 | AAACATCGCTGCACT TGGTG CTACC CACCA TTTTTGTTGCTGTCT sirA 3932066 - 3932320 + | sulfurtransferase (tRNA 2-thiouridine synthesizing protein A) TERM 5061 3932358 - 3932342 - f 82 -6.5 -5.02074 | opp_overlap 3932345 3932354, overlap 3932344 3932354 TTATCTTGTAAAAAA CACGCTT ATC AAGCGAG ATAAAGCATGGCTTG TERM 5062 3932356 - 3932344 - f 77 -7.7 -4.13963 | opp_overlap 3932345 3932354, overlap 3932342 3932354 ATCTTGTAAAAAACA CGCTT ATC AAGCG AGATAAAGCATGGCT TERM 5063 3932354 - 3932379 + F 78 -9.1 -3.46874 | gap 1, opp_overlap 3932344 3932342 3932354, overlap 3932345 AAACACGCTTATCAA GCGAGATAAAGC ATG GCTT-GTCTCGC TTGTGGCTCTTTCTT TERM 5064 3933939 - 3933917 - g 70 -9.2 -3.13553 | opp_overlap 3933916 3933912 3933911, overlap 3933916 3933912 GAACTCAAGAGAAAG CGATTGTTGT GCC ACAACAAGCG ATTACCTTTGATGCC PMI3598 3933031 - 3934170 + | multidrug efflux pump TERM 5065 3935556 - 3935566 + G 85 -6.8 -5.1675 | overlap 3935549 TATCAGCAGTCTTTG TGCC AAT GGCA TTTTTTGGTGGATCG PMI3599 3934196 - 3937330 + | multidrug efflux pump TERM 5066 3937401 - 3937366 - T 93 -9.8 -4.67234 | opp_overlap 3937369, overlap 3937369 ATTTAAGCGTAAAAA TAACCCAAACCATAGC AATG ACTGTGGTTTGGGTTT TATTTTTAGGTTAGT TERM 5067 3937398 - 3937369 - T 100 -11.5 -4.44355 | opp_overlap 3937369, overlap 3937366 TAAGCGTAAAAATAA CCCAAACCATAGC AATG ACTGTGGTTTGGG TTTTATTTTTAGGTT TERM 5068 3937369 - 3937398 + T 100 -13 -5.29885 | opp_overlap 3937369 3937366 TAAGCGTAAAAATAA CCCAAACCATAG CAATGA CTGTGGTTTGGG TTTTATTTTTAGGTT ppaA 3939759 - 3937417 - | P-type cation-translocating membrane ATPase TERM 5069 3939119 - 3939141 + g 91 -6.3 -5.44119 | overlap 3939120 ATCGCGAATGGGGTA CCACTACGA ATGAG TCGTAGTGA TTTTTTTACAATAGG TERM 5070 3939120 - 3939140 + g 83 -9.8 -3.85748 | overlap 3939119 TCGCGAATGGGGTAC CACTACGA ATGAG TCGTAGTG ATTTTTTTACAATAG TERM 5071 3939517 - 3939527 + g 81 -5.4 -5.04385 | opp_overlap 3939517 TTTCCAACTAAAACG TTGC TGT GCAA TTTTTTCAGGCTCTA TERM 5072 3939925 - 3939886 - R 84 -10.2 -3.51708 | opp_overlap 3939885 3939884, overlap 3939887 3939890 GATTTGTTAAATCAA TTAATCCCTTGTTTCTAT TGAT AAAGAAACAAGGGATCAG GGTTTTACAGAAAAA TERM 5073 3939924 - 3939887 - R 100 -13.7 -2.70704 | opp_overlap 3939885 3939884, overlap 3939886 3939890 ATTTGTTAAATCAAT TAATCCCTTGTTTCTAT TGAT AAAGAAACAAGGGATCA GGGTTTTACAGAAAA TERM 5074 3939921 - 3939890 - R 100 -13.2 -3.5013 | opp_overlap 3939885 3939884, overlap 3939887 3939886 TGTTAAATCAATTAA TCCCTTGTTTCTAT TGAT AAAGAAACAAGGGA TCAGGGTTTTACAGA PMI3601 3940556 - 3939930 - | hypothetical protein PMI3602 3940703 - 3941107 + | hypothetical protein PMI3603 3941464 - 3941171 - | hypothetical protein PMI3604 3942066 - 3941482 - | hypothetical protein TERM 5075 3941620 - 3941632 + g 77 -6.3 -4.51097 | ATAACAACCTTCGGC TAACC ATT GGTTA TTTTCTAATAATTGC TERM 5076 3942513 - 3942483 - g 79 -9 -3.96068 | overlap 3942480 TTAGCCGAAGAAGAA GCCCAGCGTCAAGC GCA ACTTGAAGCTGAAC AAGCACGCCAAGAAG TERM 5077 3942855 - 3942825 - g 79 -9 -3.96068 | overlap 3942822 TTAGCTGAAGAAGAA GCCCAGCGTCAAGC GCA ACTTGAAGCTGAAC AAGCACGCCAAGAAG TERM 5078 3942969 - 3942939 - g 71 -7.6 -3.96068 | TTAGCCGAAGAAGAA GCTCAACGTCAAGC GCA ACTTGAAGCTGAAC AAGCACGCCAAGAAG TERM 5079 3943128 - 3943116 - g 70 -2.6 -5.10208 | GAAGCTGAAGAAAAA GCGC GTATT GCAC AAGCACAAGCCGAAG ftsY 3942294 - 3944132 + | cell division protein ftsE 3944138 - 3944803 + | cell division ATP-binding protein TERM 5080 3945047 - 3945013 - g 77 -10 -3.29973 | opp_overlap 3945016 GGAAAAATGTATCAA CAGCCGCAGAGCAG TGGTATC CCGCTCCGCAACTG ACGGTCTATCTTGAT ftsX 3944796 - 3945773 + | cell division protein TERM 5081 3945822 - 3945835 + F 78 -6.7 -4.37092 | overlap 3945806 CGGGTTGCATTATTA TGGCA ACCT TGCCA TTTTATCAAACCCCT rpoH 3946115 - 3946969 + | RNA polymerase sigma-32 factor TERM 5082 3947043 - 3947016 - f 71 -8.6 -2.84634 | opp_overlap 3947021, overlap 3947021 TTGTAGAGTATGATA TAAAAGCGATAT TGAT ATATCGCTTTTT TTATACGCGGAGAAC TERM 5083 3947021 - 3947038 + F 100 -8.5 -5.60993 | opp_overlap 3947016 3947021 GAGTATGATATAAAA GCGATAT TGAT ATATCGC TTTTTTTATACGCGG TERM 5084 3947038 - 3947021 - f 89 -8.5 -4.58424 | opp_overlap 3947021, overlap 3947016 GAGTATGATATAAAA GCGATAT TGAT ATATCGC TTTTTTTATACGCGG garK 3947064 - 3948212 + | glycerate kinase PMI3610 3948604 - 3948188 - | acetyltransferase TERM 5085 3948278 - 3948264 - G 74 -4.2 -5.02074 | opp_overlap 3948264, overlap 3948265 TGATGCGCTAAAAAA GCCTGT GCT ACAGGA TCGTTGATTTGCCCT TERM 5086 3948474 - 3948455 - G 93 -13.6 -3.15758 | overlap 3948444 ACAAGCCGCTAGTAA TCGCCCGT TAAA ACGGGCGA CAAAAAGAGCATGCT TERM 5087 3948507 - 3948528 + g 78 -10.9 -3.08088 | overlap 3948500 GTGGTGATTGGTGCA GTGAGTGCC ATTT GGTACTCAC TATCTTGCCAAATTT PMI3611 3949803 - 3948616 - | MFS-family transporter PMI3612 3949917 - 3950393 + | MarR-family transcriptional regulator TERM 5088 3950423 - 3950400 - T 89 -7.5 -5.06089 | AAAGCATAAAGAAAA CCCCCATAT GGTTAA ATATAGGGG CGATAAAGTTTATTT PMI3613 3951185 - 3950433 - | peptidase TERM 5089 3950722 - 3950747 + g 71 -9.7 -2.808 | opp_overlap 3950715, overlap 3950719 GCTGAAGAGGCTGCG GTACGTGCCGC AACG GTGGCATGTGC TACTTGGATTGCTTT TERM 5090 3950990 - 3951001 + g 80 -4.4 -5.27023 | TAGTGTAGTTACTAT TTGC AGGT GCAA TTTTGTTTTTAGCAT TERM 5091 3951204 - 3951214 + r 71 -6.8 -4.01737 | CAATTAAGTCCTTTT CTGC TTA GCAG TTTAATATTATTAGT TERM 5092 3951639 - 3951611 - R 100 -12.7 -5.1675 | opp_overlap 3951616 TCATCGATGAAAAAA TAATAGCAATGCT AAA AACATTGCTATTA AGATTAAACTGAAAA ugpC 3952769 - 3951675 - | sn-glycerol-3-phosphate ABC transporter, ATP-binding protein TERM 5093 3952594 - 3952606 + g 75 -7.7 -3.96624 | TCAATCAGTAAATCG CCATC TGT GATGG TTTCTAATCCCGCTA TERM 5094 3952792 - 3952806 + r 76 -8.6 -3.40775 | opp_overlap 3952792, overlap 3952790 CTCCGTATCAACAAA GCCTTT AAC AAAGGC TCTTTGCATCAAAAT TERM 5095 3952806 - 3952792 - R 87 -8.6 -4.24342 | opp_overlap 3952792 3952790 CTCCGTATCAACAAA GCCTTT AAC AAAGGC TCTTTGCATCAAAAT ugpE 3953619 - 3952771 - | sn-glycerol-3-phosphate ABC transporter, permease protein ugpA 3954503 - 3953619 - | sn-glycerol-3-phosphate ABC transporter, permease protein TERM 5096 3954556 - 3954533 - R 80 -8.9 -3.75581 | overlap 3954531 3954528 TCTGACAAAATAACA GGCGAACAC TTATTG ATGTTCGCC GAATACCAAATACCT ugpB 3955875 - 3954571 - | glycerol-3-phosphate ABC transporter, substrate-binding protein ugpQ 3956051 - 3956767 + | glycerophosphoryl diester phosphodiesterase TERM 5097 3956776 - 3956814 + T 100 -12.7 -3.21005 | opp_overlap 3956782, overlap 3956774 3956773 3956782 GAATTAATGTGCTTT TTATAAGGTATCTGAGT GAATG ACACAGATGCCTTATAA TGCTTATTTTTATCA cynX 3958026 - 3956830 - | cyanate transport protein (MFS-family transporter) TERM 5098 3957782 - 3957757 - G 74 -6.2 -4.48072 | ATAGGCACGAGAAAA CGATGCTAAT AATAAG ATAAGCATCG CAACTTGTAGCCCTC TERM 5099 3958071 - 3958051 - H 90 -9.9 -4.04579 | opp_overlap 3958050 3958051 CTGATAAACATCAAA TTTGTCTAT TGT ATAGACAAA GTTTGTCTAAAAAAA TERM 5100 3958051 - 3958071 + H 81 -9.9 -3.01726 | opp_overlap 3958051, overlap 3958050 CTGATAAACATCAAA TTTGTCTAT TGT ATAGACAAA GTTTGTCTAAAAAAA PMI3620 3958314 - 3959279 + | hypothetical protein PMI3621 3959384 - 3959596 + | hypothetical protein TERM 5101 3959606 - 3959582 - T 81 -4.2 -5.64873 | opp_overlap 3959582 TGCAATAACAAAAAA GCCCTTAACA AATAA TGAAAAGGGC TTTTTAATTCAATGT fis 3959933 - 3959637 - | DNA-binding protein Fis dusB 3960925 - 3959954 - | tRNA-dihydrouridine synthase B TERM 5102 3960960 - 3960974 + r 70 -4.2 -5.02476 | overlap 3960961 CTGTGACTGCAAGGG CGCGTA TAT TACGCA TTTTTTACCAGATAT TERM 5103 3960961 - 3960973 + r 73 -7.7 -3.60762 | overlap 3960960 TGTGACTGCAAGGGC GCGTA TAT TACGC ATTTTTTACCAGATA prmA 3962128 - 3961247 - | ribosomal protein L11 methyltransferase panF 3963598 - 3962153 - | sodium/pantothenate symporter TERM 5104 3962496 - 3962506 + g 76 -4.6 -5.05712 | opp_overlap 3962497, overlap 3962490 3962500 GATAGGCTAGATAAA CGCG CAA TGCG TTTTTCATTGTTTAT PMI3626 3963836 - 3963588 - | hypothetical protein TERM 5105 3963718 - 3963707 - G 73 -7.2 -4.08919 | opp_overlap 3963707, overlap 3963703 AAAGCTCAAACCAAA CCGG TAGG CCGG TTAGTCCCACACTAT TERM 5106 3964043 - 3964022 - R 100 -9.5 -5.46657 | opp_overlap 3964022 TAGTCGAATAAAAAA GGCATAGTC GATA AACTATGCC TTTTACTGATAAGCT TERM 5107 3964022 - 3964043 + r 87 -8.8 -4.30844 | opp_overlap 3964022 TAGTCGAATAAAAAA GGCATAGT CGATAA ACTATGCC TTTTACTGATAAGCT accC 3965415 - 3964066 - | biotin carboxylase accB 3965898 - 3965428 - | biotin carboxyl carrier protein TERM 5108 3965951 - 3965940 - R 70 -7.2 -3.71284 | TTTTTATTAAGACAA GCGG TTGA CCGC TGCCTGTAAAGCAAA aroQ 3966374 - 3965931 - | 3-dehydroquinate dehydratase TERM 5109 3966781 - 3966750 - R 89 -10.4 -3.85159 | opp_overlap 3966748 TTAAAAACGCAATAA TCTGGCATTAAA TTAATCTG TTTAATGCCAGA AATTAGCTCAAAATC PMI3630 3967782 - 3966808 - | possible zinc-binding dehydrogenase TERM 5110 3968443 - 3968428 - H 72 -9 -2.62184 | overlap 3968430 GTGGTTGGTAGAGTA GACGGA TTTT TCCGTC CCGGCTTGCAGGATT mreB 3968469 - 3969512 + | rod shape-determining protein TERM 5111 3969564 - 3969513 - f 73 -8.2 -3.38072 | opp_overlap 3969530, overlap 3969515 TTTAGCGAAGATTAA TATTATTGTGCGAGTAAGGGAGAA AGGA TTCCCCCTTAATCACAATATAACA ATATTAACACCTGTT TERM 5112 3969562 - 3969515 - f 74 -8.6 -3.25787 | opp_overlap 3969530, overlap 3969513 TAGCGAAGATTAATA TTATTGTGCGAGTAAGGGAGAA AGGA TTCCCCCTTAATCACAATATAA CAATATTAACACCTG mreC 3969614 - 3970660 + | rod shape-determining protein mreD 3970660 - 3971154 + | rod shape-determining protein TERM 5113 3971566 - 3971579 + G 71 -6.7 -4.08767 | ATAAGCCAATTAGTT GTCAC GGAT GTGAC TTTTAGAAAGATGAC TERM 5114 3971746 - 3971757 + G 70 -3 -5.03994 | opp_overlap 3971746 GTTGAAACCGAAGCA TTGA TAGC TCAA TTTTTGTCTCTAGCG PMI3634 3971206 - 3971793 + | inhibitor of septum formation TERM 5115 3971970 - 3971986 + G 70 -3 -5.12617 | gap 1, overlap 3971970 3971971 GCATTTATTGACATT G-GGCTT GAGA AAGCCGC TTTTTTACATGCTTC cafA 3971790 - 3973259 + | ribonuclease G PMI3636 3973304 - 3977107 + | hypothetical protein TERM 5116 3977188 - 3977160 - g 88 -3.9 -5.72118 | AAAAAATATAAAAAA TAATCTGGCGC AAATAGA GCAACAGATTA AGCAACTCCCCGATT TERM 5117 3977642 - 3977620 - g 79 -4.8 -5.1244 | GCATTAAGAGAAAAA GGTGCTGAAA TTA TTTCTGTACC GGCAGCCTTTACTCG PMI3637 3977104 - 3977964 + | carbon-nitrogen hydrolase TERM 5118 3978719 - 3978735 + G 83 -7.2 -4.67982 | GCCTGTGGTTTTAGG CGCCGG ATGGC CCGGTG TTTTATTACATGAAG tldD 3977961 - 3979406 + | modulator of DNA gyrase TERM 5119 3979468 - 3979450 - f 90 -8.9 -4.66318 | opp_overlap 3979450 ATTACCCCAATAAAA CTCCATC GCTAT GATGGAG TTTCTATTTAAGTGA TERM 5120 3979450 - 3979468 + F 91 -9.6 -4.35044 | opp_overlap 3979450 ATTACCCCAATAAAA CTCCATCG CTA TGATGGAG TTTCTATTTAAGTGA PMI3639 3979500 - 3980006 + | exported ribonuclease PMI3640 3980006 - 3980287 + | ribonuclease inhibitor TERM 5121 3980367 - 3980321 - T 87 -11.9 -2.62292 | gap 1, opp_overlap 3980331, overlap 3980317 3980330 3980331 AAGTATTACAAGGTA TCCTGAAAACCGCAGTGGTA TCATGATT TAGCACTGC-GTTTTCAGGA GCATCAGTCGTTAAG PMI3641 3980938 - 3980378 - | hypothetical protein TERM 5122 3980691 - 3980707 + g 72 -10.1 -2.74605 | overlap 3980687 3980694 TATTGAATTTGGCGA CGACGCG CTT CGCGTTG TACCTTTTGCGCCAA tldE 3981098 - 3982453 + | modulator of DNA gyrase rnk 3982969 - 3982559 - | regulator of nucleoside diphosphate kinase TERM 5123 3983029 - 3982999 - R 100 -17 -4.27316 | opp_overlap 3983002 TGTTCCAATGCAAAA CAACACCCCCAC GGATTAG GTGGGGGTGTTG TTAAACTCTATGTAA TERM 5124 3983002 - 3983026 + r 100 -12.9 -3.67558 | opp_overlap 3982999 TCCAATGCAAAACAA CACCCCCAC GGATTAG GTGGGGGTG TTGTTAAACTCTATG TERM 5125 3983098 - 3983071 - R 79 -7 -4.72272 | opp_overlap 3983075 GTTCTGTAGCAAAAA GAAAGAGGCAGT GATC ACAGTCTCTTTC TGGGATTTTTGTTAA ptsO 3983416 - 3983144 - | phosphocarrier protein PMI3645 3984267 - 3983413 - | P-loop ATPase ptsN 3984819 - 3984352 - | nitrogen regulatory protein [includes: PTS system EIIA component] TERM 5126 3984745 - 3984757 + g 73 -7.7 -3.93398 | overlap 3984749 CGCGCGTTTTTTACT TGTGC AAT GCACA TTGTTATGTGTACAT TERM 5127 3984845 - 3984869 + r 100 -12.9 -5.06816 | opp_overlap 3984845 ACTTAGACCAGCAAA CCAGATGCCAC AGA GTGACATCTGG TTTTTGTTAGCGGAT TERM 5128 3984869 - 3984845 - R 100 -15.1 -3.82218 | opp_overlap 3984845 ACTTAGACCAGCAAA CCAGATGCCAC AGA GTGACATCTGG TTTTTGTTAGCGGAT PMI3647 3985262 - 3984975 - | probable sigma(54) modulation protein rpoN 3986761 - 3985286 - | RNA polymerase sigma-54 factor (sigma-N) TERM 5129 3985715 - 3985725 + g 79 -5.4 -4.84017 | TAATGTCTCATTACG GCTT TCT AAGC TTTTTATCAGCCATT PMI3649 3987546 - 3986821 - | ABC transporter ATP-binding protein TERM 5130 3987396 - 3987419 + g 73 -7.4 -4.07687 | opp_overlap 3987395 3987393 3987396 3987412 CACGGGCGACAATAC CTACCACCAT ATAA AAGGTGGTGG TTTTCCCCGCACCGT PMI3650 3988086 - 3987553 - | organic solvent tolerance protein PMI3651 3988645 - 3988067 - | hypothetical protein kdsC 3989220 - 3988663 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase kdsD 3990234 - 3989248 - | arabinose 5-phosphate isomerase TERM 5131 3990268 - 3990256 - R 73 -7.7 -3.68738 | TAGGTTAAGAGAGAA TGTGC AAC GCACA ACACCGTAATATAAA PMI3654 3991220 - 3990240 - | sodium/calcium exchanger protein TERM 5132 3990636 - 3990626 - G 71 -4 -4.93296 | GCATGATGATAAAAA CATT ATC AATG ATCATTCTTGTTGCA PMI3655 3991464 - 3992276 + | ABC transporter ATP-binding protein PMI3656 3992280 - 3993059 + | hypothetical protein PMI3657 3993063 - 3993599 + | hypothetical protein TERM 5133 3994101 - 3994089 - g 70 -3.4 -4.88736 | TATTATTGATAAAAA TGGT CGACC ACCA GTACGCCTTGATTTT PMI3658 3993673 - 3994302 + | toluene tolerance protein TERM 5134 3994398 - 3994374 - g 100 -13.7 -4.17296 | CGCTAGATAGAGAAA CGTTATTGCCA GTT TGGCAACAACG TAAAGCGTTATTAGC PMI3659 3994304 - 3994597 + | anti-sigma factor antagonist TERM 5135 3994659 - 3994626 - f 100 -11.1 -5.9003 | opp_overlap 3994627, overlap 3994627 AAAGCAATAAAAAAA TCCCCCTTATTGATA CTTT TATCATTAAGGGGGT TTTTCATGGTTTAAG TERM 5136 3994658 - 3994627 - f 100 -14.6 -4.10357 | opp_overlap 3994627, overlap 3994626 AAGCAATAAAAAAAT CCCCCTTATTGATA CTTT TATCATTAAGGGGG TTTTTCATGGTTTAA TERM 5137 3994627 - 3994658 + F 100 -14.6 -4.84363 | opp_overlap 3994626 3994627 AAGCAATAAAAAAAT CCCCCTTATTGATA CTTT TATCATTAAGGGGG TTTTTCATGGTTTAA PMI3660 3994738 - 3994992 + | morphoprotein TERM 5138 3996017 - 3996032 + G 74 -6.2 -4.4727 | opp_overlap 3996017 GAATGATCACTGAAA CGATTT TTGA AAATCG TTTTATGCATATTCC murA 3995041 - 3996303 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 5139 3996328 - 3996372 + T 100 -13.2 -3.15427 | opp_overlap 3996338, overlap 3996338 GTTACCCTGTTATCG TGATTAAAAACCATAGCACT TTATT GGTGCTATGGTTTTTTATTA TTCATCAAGCGTATT TERM 5140 3996338 - 3996362 + T 100 -10.8 -5.66229 | opp_overlap 3996338, overlap 3996328 TATCGTGATTAAAAA CCATAGCACT TTATT GGTGCTATGG TTTTTTATTATTCAT TERM 5141 3996362 - 3996338 - T 93 -10.1 -4.72986 | opp_overlap 3996338 3996328 TATCGTGATTAAAAA CCATAGCAC TTTATTG GTGCTATGG TTTTTTATTATTCAT PMI3662 3997691 - 3996387 - | hypothetical protein TERM 5142 3996575 - 3996599 + g 71 -3.7 -4.9138 | GAAATACCGCTTTAA GATATATTTTT TCT AAGGATGTATC TTTTATTTCGATAAT TERM 5143 3997028 - 3997041 + g 71 -3.9 -4.94902 | opp_overlap 3997028 AGGAACCAATAACAT TTTCT CGTG AGAAA TTTTTGTACTCATTA PMI3663 3998595 - 3997684 - | hypothetical protein TERM 5144 3998304 - 3998322 + g 81 -7.4 -4.61284 | opp_overlap 3998303 3998304 CATCGAGAATAAAAG GAAGAGCC TCT GGATCTTC TTTCATTTTTTTTAT TERM 5145 3999552 - 3999564 + G 74 -4.1 -5.02476 | overlap 3999563 TTGGCTCTGCATTAT TAGCG GGA TGCTA TTTTTTGCAAAATAT PMI3664 3998924 - 3999973 + | hypothetical protein degS 4001084 - 4000014 - | protease TERM 5146 4001236 - 4001215 - R 100 -11.7 -5.9003 | AAATCAAGAAAAAAA CCCTATTAC CGAA GTAATAGGG CTGAAAGGAACAAAT degQ 4002667 - 4001276 - | protease TERM 5147 4001649 - 4001659 + g 70 -5.4 -4.46404 | overlap 4001645 TCTTTACCTGGTGGT GTTG TAC CAAC TTTTGCTCTTAATTC TERM 5148 4002870 - 4002896 + r 100 -14.6 -3.15809 | opp_overlap 4002874, overlap 4002874 CAAAATAATATAAAA TAAACGCCACAA TAG TTGTGGCGTTTG TGTGTTAATCATCTT TERM 5149 4002874 - 4002892 + r 100 -13.2 -4.22927 | opp_overlap 4002874, overlap 4002870 ATAATATAAAATAAA CGCCACAA TAG TTGTGGCG TTTGTGTGTTAATCA TERM 5150 4002892 - 4002874 - R 100 -13.2 -4.89519 | opp_overlap 4002874 4002870 ATAATATAAAATAAA CGCCACAA TAG TTGTGGCG TTTGTGTGTTAATCA PMI3667 4003305 - 4002901 - | hypothetical protein PMI3668 4003508 - 4004626 + | ATPase TERM 5151 4005214 - 4005199 - g 76 -6.8 -4.32857 | CGCGGTAAACATAAA GCGGAA TACA CTCCGC ACGTTGATACTGGTG TERM 5152 4005404 - 4005394 - g 71 -6.8 -4.10453 | GAAATCGCGGTAAAA GGCA TGC TGCC AAAAGGGCCTCTGGG rplM 4005076 - 4005504 + | 50S ribosomal protein L13 rpsI 4005520 - 4005912 + | 30S ribosomal protein S9 TERM 5153 4005942 - 4005975 + F 93 -9.7 -4.7153 | opp_overlap 4005950, overlap 4005950 4005971 GATATCAATTTGATG TTGAAAAACCCGTCT TTAC AGGCGGGTTTTTTTA TTTTTAAAATTGTTT TERM 5154 4005950 - 4005967 + F 100 -9.1 -6.20267 | opp_overlap 4005950, overlap 4005942 TTTGATGTTGAAAAA CCCGTCT TTAC AGGCGGG TTTTTTTATTTTTAA TERM 5155 4005967 - 4005950 - f 79 -6.9 -4.59773 | opp_overlap 4005942 4005950 TTTGATGTTGAAAAA CCCGTCT TTAC AGGCGGG TTTTTTTATTTTTAA sspA 4006548 - 4007189 + | stringent starvation protein A sspB 4007196 - 4007705 + | stringent starvation protein B TERM 5156 4007733 - 4007751 + T 100 -10.3 -5.77988 | opp_overlap 4007733 TTTTCATTGCATAAA GCCCAGT TAAAT ACTGGGC TTTTTTTATATCTAT TERM 5157 4007751 - 4007733 - T 89 -10.3 -3.89346 | opp_overlap 4007733 TTTTCATTGCATAAA GCCCAGT TAAAT ACTGGGC TTTTTTTATATCTAT PMI3673 4008810 - 4007785 - | MerR-family transcriptional regulator TERM 5158 4008348 - 4008359 + g 79 -5.8 -4.84527 | TTGAAATACGCTGTT GCCA TGCT TGGC TTTTTAATGTGTGCG TERM 5159 4008860 - 4008844 - R 82 -8.7 -4.14739 | TCATGCAGGTTAAAA CCTCACG TAA CGTAAGG GTCAATAGGTTAATT TERM 5160 4008932 - 4008911 - R 100 -9.5 -5.70829 | opp_overlap 4008911 AACAGCATAAAAAAA CGCCCTATA GTGA TATAGAGCG TTTTAATCAGTCAAT TERM 5161 4008911 - 4008932 + r 76 -7.3 -4.28548 | opp_overlap 4008911 AACAGCATAAAAAAA CGCCCTATA GTGA TATAGAGCG TTTTAATCAGTCAAT PMI3674 4010226 - 4008961 - | probable aminohydrolase PMI3675 4011515 - 4010241 - | C4-dicarboxylate transporter TERM 5162 4011215 - 4011205 - G 70 -5.4 -4.47491 | opp_overlap 4011205 4011203 ATATTAATAAAATAA GTGA CGA TCAC TGTTGCTGGAATAAG TERM 5163 4011975 - 4011941 - R 100 -13.2 -4.76312 | opp_overlap 4011945, overlap 4011922 4011945 TATAATAGTTAAAAA TAAATTACCCCATTTT AAT AAAACAGGGTAATTTA TAAATAAAATTGTAT TERM 5164 4011971 - 4011945 - R 100 -9.6 -4.89966 | opp_overlap 4011945, overlap 4011941 ATAGTTAAAAATAAA TTACCCCATTTT AAT AAAACAGGGTAA TTTATAAATAAAATT gltD 4013439 - 4012039 - | glutamate synthase (NADPH) small chain TERM 5165 4012286 - 4012275 - G 73 -7.2 -4.01101 | opp_overlap 4012274 4012271 4012283 CAAATGCAAGAATAA CCGC ATCT GCGG ATAATATATGTTCGC TERM 5166 4013212 - 4013243 + g 78 -11 -2.9675 | TGCTTCTATTATTCG TCCTTCATTGGCTA ATTT TAGCCAATTAGGGA TATAGTTATGCACTG gltB 4017904 - 4013447 - | glutamate synthase [NADPH] large chain TERM 5167 4014417 - 4014429 + g 80 -7.7 -4.32402 | AGCAAATCCGTTCTG CCGAT TAA ATCGG TTATTTTCCTTACGC TERM 5168 4016730 - 4016743 + g 77 -5.2 -4.8543 | ACCATTAGTTCGCCA GGGC CGACAC GCCC TTTTTCTAGAACTTC TERM 5169 4017294 - 4017271 - G 80 -6 -4.73388 | overlap 4017273 AACGTTGATGAAAAA GACAGATGGA CGAT TCCATCCGTA AATCCGCTAAGTCAG TERM 5170 4017292 - 4017273 - G 79 -8.6 -3.98256 | overlap 4017271 CGTTGATGAAAAAGA CAGATGGA CGAT TCCATCCG TAAATCCGCTAAGTC TERM 5171 4017339 - 4017317 - G 76 -3.3 -5.18357 | overlap 4017321 TAAGTCAGTAAAAAA GCGAGGCAA ATCAA TTGCCATGC ACAGCCCTTTATAGA TERM 5172 4018198 - 4018211 + H 93 -6.7 -5.41746 | TATGGGATGGTGAGT GTGAG CTAT CTCAC TTTTTTTACGGGGTT arcB 4018571 - 4020907 + | aerobic respiration control sensor/response regulatory protein TERM 5173 4020929 - 4020905 - f 100 -8.5 -5.626 | overlap 4020908 GACGCTAGAAAAAAA TAACCCCAACC GAA GGTTGGGGTGC GCGAATACTGCGCCA TERM 5174 4020926 - 4020908 - f 100 -14.6 -4.89054 | overlap 4020905 GCTAGAAAAAAATAA CCCCAACC GAA GGTTGGGG TGCGCGAATACTGCG elbB 4021144 - 4021794 + | enhancing lycopene biosynthesis protein 2 TERM 5175 4022367 - 4022383 + G 79 -9.4 -3.70674 | opp_overlap 4022356, overlap 4022356 4022355 4022365 CTCACCGCCCATGAG GCGGCT TTATT AGCCGC TGTTTTACCTAATCC mtgA 4021815 - 4022516 + | monofunctional biosynthetic peptidoglycan transglycosylase ureR 4023401 - 4022520 - | urease operon transcriptional activator TERM 5176 4022934 - 4022924 - G 70 -2.6 -5.13016 | AATTAAAACGAAAAA TATT AAG AATA TCGACCCCTTCGTGA TERM 5177 4022999 - 4022973 - G 100 -5.1 -5.83211 | opp_overlap 4022975 4022977 CAGCAAAATAAAAAA GAGGCTCTGTT GCATA AACAGGGTCTC TTGAGAGGGGGTGCC TERM 5178 4024146 - 4024136 - g 70 -8.2 -3.72027 | overlap 4024137 ATGCCCTATTAACAA CGCC GGG GGCG ACAAAATTTTATCGT UreD 4023895 - 4024719 + | urease accessory protein ureA 4024741 - 4025043 + | urease gamma subunit ureB 4025052 - 4025378 + | urease beta subunit TERM 5179 4026055 - 4026071 + G 73 -9.5 -3.2614 | GGGGGCAACGCCAAT GGCAATT CAC AATTGCC TTAATGTCGCCGATG TERM 5180 4026905 - 4026887 - g 74 -4.6 -4.84359 | opp_overlap 4026887 4026891, overlap 4026891 GGAGTGCCAGAAAAA TTAGGCTT AAA AAGCTTAA TTGGTCGTGTGGAGG ureC 4025375 - 4027078 + | urease alpha subunit ureE 4027106 - 4027591 + | urease accessory protein ureF 4027619 - 4028287 + | urease accessory protein ureG 4028297 - 4028914 + | urease accessory protein PMI3689 4029587 - 4029009 - | phospholipid-binding lipoprotein diaA 4030187 - 4029597 - | DnaA initiator-associating protein PMI3691 4030587 - 4030210 - | hypothetical protein PMI3692 4032464 - 4030692 - | lipoprotein PMI3693 4032526 - 4033404 + | tetrapyrrole methylase TERM 5181 4033667 - 4033657 - T 70 -8.2 -3.02043 | overlap 4033645 4033644 AAGGGTGCGGTAAGA GCGC ACC GCGC AACTGGTAACAGTTT TERM 5182 4033842 - 4033878 + T 100 -13.1 -3.14616 | opp_overlap 4033847, overlap 4033847 TCAACTCACCTTATA TAAAACCCTCGATTCAC TCT GTGGCTCGAGGGTTTTC TGCTTTATTGCTATT TERM 5183 4033847 - 4033873 + T 100 -13 -4.67256 | opp_overlap 4033847, overlap 4033842 TCACCTTATATAAAA CCCTCGATTCAC TCT GTGGCTCGAGGG TTTTCTGCTTTATTG TERM 5184 4033873 - 4033847 - T 100 -10.8 -4.54047 | opp_overlap 4033842 4033847 TCACCTTATATAAAA CCCTCGATTCAC TCT GTGGCTCGAGGG TTTTCTGCTTTATTG PMI3694 4034642 - 4033938 - | hypothetical protein PMI3695 4034757 - 4035659 + | LysR-family transcriptional regulator TERM 5185 4035689 - 4035717 + T 73 -7.5 -3.73302 | opp_overlap 4035695, overlap 4035695 TTTGATAATGCAATT AAAAAAGATCCCC CTA GAGGATCTTTTTA TTATTAAATCTATTA TERM 5186 4035695 - 4035711 + T 84 -6.5 -5.30348 | opp_overlap 4035695, overlap 4035689 AATGCAATTAAAAAA GATCCCC CTA GAGGATC TTTTTATTATTAAAT TERM 5187 4035711 - 4035695 - T 95 -8.7 -5.29385 | opp_overlap 4035695 4035689 AATGCAATTAAAAAA GATCCCC CTA GAGGATC TTTTTATTATTAAAT PMI3696 4036125 - 4035733 - | hypothetical protein TERM 5188 4036260 - 4036244 - R 79 -2.4 -5.82036 | ACAATAAAGAAAAAA TAATAT GGAGG ATATTA AGAAGAATTAACATT PMI3697 4036602 - 4036297 - | hypothetical protein TERM 5189 4036527 - 4036555 + g 100 -13.3 -4.75308 | overlap 4036512 GCGCTAATTGAGTGC GCTGTTGTTGAAT TTC ATCCAACAACAGC TTTTTGCGTCTTGCT PMI3698 4036996 - 4036586 - | hypothetical protein TERM 5190 4036970 - 4036957 - G 77 -9.5 -3.47583 | opp_overlap 4036954 4036952 4036969, overlap 4036950 TAAGAGAATTCAGAA CCCCG GATG CGGGG CCCTGTGGTCTTTGA PMI3699 4037308 - 4037003 - | hypothetical protein TERM 5191 4037506 - 4037473 - R 100 -10.5 -5.63517 | opp_overlap 4037478, overlap 4037478 GCTTGAAATAAAAAA CAAAAGCCTGTTTTA ATCA TAAAACAGGCTTTAA GATGCTAAATATTAA TERM 5192 4037501 - 4037478 - R 100 -12.6 -5.58051 | opp_overlap 4037478, overlap 4037473 AAATAAAAAACAAAA GCCTGTTTTA ATCA TAAAACAGGC TTTAAGATGCTAAAT TERM 5193 4037478 - 4037501 + r 95 -12.6 -3.62275 | opp_overlap 4037478 4037473 AAATAAAAAACAAAA GCCTGTTTTA ATCA TAAAACAGGC TTTAAGATGCTAAAT PMI3700 4038221 - 4037553 - | hypothetical protein PMI3701 4038945 - 4040198 + | sodium:dicarboxylate symporter TERM 5194 4040278 - 4040312 + T 100 -15.3 -2.86785 | gap 1, opp_overlap 4040278, overlap 4040283 AATTAATAATAAAAA CAG-AACCCCATATAG GAAA CTATATGGGGTTTCTG GTTATTGATATGATA TERM 5195 4040312 - 4040278 - T 100 -15.3 -5.3321 | gap 1, opp_overlap 4040278 4040283 AATTAATAATAAAAA CAG-AACCCCATATAG GAAA CTATATGGGGTTTCTG GTTATTGATATGATA TERM 5196 4040283 - 4040306 + T 100 -14 -4.14859 | opp_overlap 4040278, overlap 4040278 ATAATAAAAACAGAA CCCCATATAG GAAA CTATATGGGG TTTCTGGTTATTGAT fadH 4042355 - 4040337 - | 2,4-dienoyl-CoA reductase TERM 5197 4040410 - 4040428 + g 75 -3 -5.33124 | TTAGCCTCTTTTGCC CCGCCAAT AAG ATGGACGG TTTTATTTTCTTGTT TERM 5198 4040736 - 4040707 - G 87 -8.6 -4.63218 | gap 1, opp_overlap 4040725, overlap 4040710 TCTTTTTTAATAAAA GGATCGGCGGAGG TGATC CCTCCGC-GATGC GTAAGTGTTGGGTCA TERM 5199 4040733 - 4040710 - G 70 -8.9 -3.25538 | gap 1, opp_overlap 4040725, overlap 4040707 TTTTTAATAAAAGGA TCGGCGGAGG TGATC CCTCCGC-GA TGCGTAAGTGTTGGG PMI3703 4042625 - 4043041 + | hypothetical protein TERM 5200 4043134 - 4043101 - T 100 -15.5 -3.27022 | opp_overlap 4043101 4043105, overlap 4043105 TTCAGGTTAGATGAA TAAACGCCCAGAATA AAGA TATGCTGGGCGTTTA TTATTAAAGTGATAA TERM 5201 4043101 - 4043134 + T 100 -15.5 -3.66018 | opp_overlap 4043101 4043105, overlap 4043105 TTCAGGTTAGATGAA TAAACGCCCAGAATA AAGA TATGCTGGGCGTTTA TTATTAAAGTGATAA TERM 5202 4043130 - 4043105 - T 100 -11.9 -4.29106 | opp_overlap 4043101 4043105, overlap 4043101 GGTTAGATGAATAAA CGCCCAGAATA AAGA TATGCTGGGCG TTTATTATTAAAGTG TERM 5203 4043105 - 4043130 + T 100 -11.9 -4.45738 | opp_overlap 4043105 4043101, overlap 4043101 GGTTAGATGAATAAA CGCCCAGAATA AAGA TATGCTGGGCG TTTATTATTAAAGTG PMI3704 4045956 - 4043158 - | probable exported protease PMI3705 4047655 - 4045946 - | ABC transporter ATP-binding protein TERM 5204 4046434 - 4046424 - G 77 -8.2 -4.17048 | TCTCCTTTAAAATAA GGCC AGT GGCC GCTTAACGCACGTAA TERM 5205 4047312 - 4047323 + g 70 -3 -5.14563 | opp_overlap 4047312 GTTAACCGCAACATA TAGT GTTT ACTA TTTTTTGATAGCCAG TERM 5206 4047610 - 4047595 - G 91 -11.8 -3.82031 | GGAACCAGCAGTAAA GGGCGG TACG CCGCCC CCAAAAAGGTGAAAC PMI3706 4050468 - 4047718 - | TonB-dependent receptor PMI3707 4051585 - 4050572 - | FecR-like transcriptional regulator PMI3708 4052123 - 4051575 - | ECF-family sigma factor PMI3709 4052295 - 4053086 + | TonB-like protein PMI3710 4054363 - 4053155 - | transposase TERM 5207 4053730 - 4053743 + g 75 -8.1 -4.06502 | TCCGTTGAAGTCTTG CCAGC TTTC GCTGG TTTACTTTAAAACTG PMI3711 4054386 - 4054802 + | transposase TERM 5208 4054813 - 4054854 + T 87 -10.7 -3.6502 | opp_overlap 4054812 4054813, overlap 4054824 GTTAGTTAAAAAACC GCGCCTTATATCCCCGACC TGAA GGACGGGGTTTTACGGTGC TTTGGATAAAACGTA TERM 5209 4054824 - 4054843 + T 95 -10.6 -4.18094 | opp_overlap 4054813 4054812, overlap 4054813 AACCGCGCCTTATAT CCCCGACC TGAA GGACGGGG TTTTACGGTGCTTTG TERM 5210 4054912 - 4054881 - T 80 -8.9 -3.73008 | opp_overlap 4054888, overlap 4054888 CGTAAAGAGAGATAA TAAAAAAGCAGAG GGTGAG CTCTGCTTTTTTG CGTTCAGCTAAATAA TERM 5211 4054888 - 4054905 + T 88 -7 -5.15969 | opp_overlap 4054881 4054888 AGAGATAATAAAAAA GCAGAG GGTGAG CTCTGC TTTTTTGCGTTCAGC TERM 5212 4054905 - 4054888 - T 100 -7 -5.62045 | opp_overlap 4054888, overlap 4054881 AGAGATAATAAAAAA GCAGAG GGTGAG CTCTGC TTTTTTGCGTTCAGC PMI3712 4056598 - 4054931 - | ABC transporter ATP-binding component TERM 5213 4056364 - 4056387 + g 88 -9 -4.57341 | gap 1 GTTGTGGGTTTAATT TTGGCT-CTTG TGG CAAGTAGCCAA TTTTTAGACCCGGTT TERM 5214 4056633 - 4056644 + H 70 -4.4 -4.74103 | TAAAAGAGATTTTAT CTGA AGTG TCAG TTTTTGCGTTAAACA TERM 5215 4058430 - 4058395 - g 74 -6.1 -4.3851 | opp_overlap 4058394, overlap 4058403 TATACGAAAGATAAA GCGATAGATCGCAAT TATGCG ATGGCGATCGCTCGC CAAGAAAGTGCATGG slt 4056940 - 4058859 + | soluble lytic murein transglycosylase TERM 5216 4059039 - 4059057 + G 71 -6 -4.19276 | CGCCAAGCGTTTGAA CAGGGAGT TGA ATTTCCTG TTTTACAACTTTTAA trpR 4058961 - 4059272 + | trp operon repressor TERM 5217 4059324 - 4059297 - T 100 -10 -5.38054 | opp_overlap 4059297 CGTTAGAAATAAAAA TGCCATTTAATC AGTT GGTTAAATGGCA TTTTTTTTAAATAGC TERM 5218 4059297 - 4059324 + T 100 -12.2 -5.81412 | opp_overlap 4059297 CGTTAGAAATAAAAA TGCCATTTAATC AGTT GGTTAAATGGCA TTTTTTTTAAATAGC PMI3715 4059901 - 4059362 - | hypothetical protein TERM 5219 4059960 - 4059950 - H 74 -4 -5.1925 | GTATAACGGAAAAAA TGTA TGT TACA GGTCTATCTTGTTCG gpmB 4059953 - 4060600 + | probable phosphoglycerate mutase TERM 5220 4060612 - 4060637 + T 74 -7.7 -3.94877 | opp_overlap 4060610 4060612 TTAATGACAATAACA GACTCTCTT CGCTGTAA AAGAGAGTC TTATTGTTAGGCCGT TERM 5221 4060637 - 4060612 - T 73 -8.4 -3.52995 | opp_overlap 4060612, overlap 4060610 TTAATGACAATAACA GACTCTCTTC GCTGTA AAAGAGAGTC TTATTGTTAGGCCGT rob 4061546 - 4060644 - | right origin-binding protein TERM 5222 4061976 - 4061986 + G 70 -8.2 -3.6761 | opp_overlap 4061974, overlap 4061974 4061972 CTTGCTGAAGATACC GCCG ATG CGGC TATTTCTTGCCAACA creA 4061748 - 4062224 + | hypothetical protein TERM 5223 4062377 - 4062345 - T 76 -7.1 -4.16016 | opp_overlap 4062351, overlap 4062351 TTATGCTTTAATAAA GAAAAACCCCGAA ACTGAAA TCCGGGGTTTTTA GCATTATTTTTTACT TERM 5224 4062371 - 4062351 - T 88 -6.1 -5.47159 | opp_overlap 4062351, overlap 4062345 TTTAATAAAGAAAAA CCCCGAA ACTGAAA TCCGGGG TTTTTAGCATTATTT arcA 4063124 - 4062408 - | aerobic respiration control protein SEQUENCE gi|172055989|ref|NC_010555.1| Proteus mirabilis plasmid pHI4320, complete sequence (length 36289) pir 1 - 867 + | Pi protein (replication initiation protein) TERM 1 1002 - 986 - g 75 -5.8 -4.67651 | overlap 988 AGAGGCGAAAAGAAA CAGCAC TAAGT GCGCTG AAAAAAATTTTTTTC PMIP02 883 - 1272 + | hypothetical protein TERM 2 1325 - 1338 + F 73 -8.1 -3.53279 | opp_overlap 1324, overlap 1323 TACCTCTTGACTAAG GGGCA CATG TGCCC TATTGTGTTTATAGA PMIP03 1333 - 1845 + | hypothetical protein PMIP04 1853 - 2041 + | hypothetical protein TERM 3 2084 - 2049 - f 78 -9.8 -3.34787 | overlap 2050 AAGAGTAGTTTATAA CGCAGGTAGTGAAAGC GGAC ACTTTTACTACCTGCT AATCACAACAACCTG TERM 4 2083 - 2050 - f 100 -13.3 -2.6039 | overlap 2049 AGAGTAGTTTATAAC GCAGGTAGTGAAAGC GGAC ACTTTTACTACCTGC TAATCACAACAACCT PMIP05 2114 - 2380 + | putative DNA_binding protein TERM 5 2416 - 2394 - f 71 -7.8 -3.48593 | opp_overlap 2394 2397, overlap 2397 GAGTTTTTCAGACAA TAACACCC GCTTTTA GGGTGTTA TTTGCCTTAAATCTC TERM 6 2394 - 2416 + F 74 -7.8 -3.77666 | opp_overlap 2394 2397, overlap 2397 GAGTTTTTCAGACAA TAACACCC GCTTTTA GGGTGTTA TTTGCCTTAAATCTC PMIP06 2440 - 2688 + | hypothetical protein TERM 7 2793 - 2767 - g 73 -5.8 -4.65838 | opp_overlap 2774, overlap 2768 2774 TAGATATTGCAAAAA CGGAAAGCGGAT TCA ATCCGTTTGCCA TTGCGGAGATCGTAA TERM 8 2774 - 2786 + G 70 -7.7 -3.66178 | opp_overlap 2774 2768 2767 TGCAAAAACGGAAAG CGGAT TCA ATCCG TTTGCCATTGCGGAG TERM 9 3168 - 3157 - g 86 -4.4 -5.38549 | TTGAAAGAACAAAAA CAAC GGTA GTTG TTCCAAGCACAAAAA pilX1 2685 - 3320 + | putative transglycosylase pilX2 3340 - 3588 + | putative conjugal transfer protein TERM 10 4184 - 4173 - g 74 -4.4 -4.93333 | opp_overlap 4173 AAGTAAAATAGAAAA GAAC TTCC GTTC TCTTGTCCCTTTTGC TERM 11 4662 - 4675 + G 81 -6.7 -4.7373 | opp_overlap 4662 GGATTATTTTCAACA TACCG AATC CGGTA TTTTTGATGCGCTGA pilX4 3610 - 6384 + | putative conjugal transfer protein pilX5 6396 - 7160 + | putative conjugal transfer protein eex 7173 - 7403 + | putative lipoprotein pilX6 7422 - 8579 + | putative conjugal transfer protein TERM 12 8673 - 8647 - g 88 -7.8 -5.08824 | overlap 8649 8650 GTGCCAGTCAAAAAA CAGTTCCCCCCG TGT CGGGGGGATTAG AGCCTGTTAATACTC TERM 13 8671 - 8649 - g 85 -9 -4.17608 | overlap 8647 8650 GCCAGTCAAAAAACA GTTCCCCCCG TGT CGGGGGGATT AGAGCCTGTTAATAC TERM 14 8670 - 8650 - g 85 -12.5 -3.09842 | overlap 8649 8647 CCAGTCAAAAAACAG TTCCCCCCG TGT CGGGGGGAT TAGAGCCTGTTAATA pilX7 8583 - 8717 + | conjugal transfer protein pilX8 8719 - 9426 + | conjugal transfer protein TERM 15 9706 - 9693 - g 79 -6.7 -4.55721 | AAAGTGTACATAAAA GTCAC GCCT GTGAC ACAAACCATTGAAGC pilX9 9429 - 10352 + | conjugal transfer protein TERM 16 10927 - 10915 - g 72 -3.3 -5.08178 | ACAGAGACAGAAAAA CGTTC ACT GAGCG CGATTAAAGTGTTGC pilX10 10345 - 11547 + | conjugal transfer protein TERM 17 11727 - 11740 + G 79 -6.7 -4.64598 | TGTAAATCATTTGCC TCAGC ACTG GCTGA TTTTTGCAGTGATTC pilX11 11544 - 12578 + | conjugal transfer protein TERM 18 12990 - 12980 - g 75 -5.4 -4.68919 | AAATATAAAGGAAAA TACC TCT GGTA TACCGCCCCTGATTT TERM 19 13805 - 13817 + G 70 -9.1 -3.14848 | overlap 13804 GTTGAGGTGACGTTA CGGGA AAA TCCCG ATTTTGATCCGACAC taxB 12581 - 14434 + | conjugal transfer protein PMIP18 14431 - 14838 + | putative lipoprotein PMIP19 14828 - 15376 + | putative conjugal transfer protein PMIP20 15431 - 15574 + | hypothetical protein TERM 20 15637 - 15647 + G 76 -3.2 -5.29445 | TGCTAAGGAAATTTA TAGC CTT GCTG TTTTTGTTATTAAGC TERM 21 15923 - 15912 - g 70 -3 -5.03715 | overlap 15922 ATGACGCTGAAAAAA TACT GAAA AGTA AAAATGCCTTTTATC PMIP21 15590 - 16102 + | hypothetical protein PMIP22 16099 - 16221 + | hypothetical protein TERM 22 16282 - 16245 - f 87 -7.9 -4.78237 | opp_overlap 16249, overlap 16230 16247 TATTTTACAAGAAAA TATAGGTATGAATGAAC AATT GTCTATTCATACCTATT GCAAAAAAAGACAAA TERM 23 16280 - 16247 - f 91 -10.5 -4.00512 | opp_overlap 16249, overlap 16245 TTTTACAAGAAAATA TAGGTATGAATGAAC AATT GTCTATTCATACCTA TTGCAAAAAAAGACA TERM 24 16249 - 16278 + F 72 -8.7 -3.01712 | opp_overlap 16247 16245 TTACAAGAAAATATA GGTATGAATGAAC AATT GTCTATTCATACC TATTGCAAAAAAAGA PMIP23 16252 - 16446 + | hypothetical protein TERM 25 17130 - 17140 + G 78 -4 -5.2166 | opp_overlap 17130 GTACGTAATTCAATA TTAG ATG CTAA TTTTTTGGATTATTA TERM 26 17462 - 17491 + G 74 -3.7 -5.00884 | opp_overlap 17462 17471 CAGGCAGCCTGAAAT TAAAAAATACCCT ACTA AGGCTATTTTTGA TTTTTTAGAGACCGT TERM 27 17664 - 17680 + G 71 -5.1 -4.65895 | opp_overlap 17664 17677, overlap 17666 GCACATGCTATAGAA TGGGTGT TTA ACACCGA TTTTTACATCCAAAA PMIP24 16461 - 18140 + | hypothetical protein TERM 28 18528 - 18518 - g 95 -4.6 -5.75538 | opp_overlap 18518 CGCAAAAAATAAAAA GCCC GTA GAGC GTATTTTAGTATCGG TERM 29 20448 - 20428 - g 81 -6.9 -4.82819 | TAGATGATAAGAAAA CAGGGAA GATAGGT TTCCCTG AAAAGAAAAAGTAAC traE 18144 - 20462 + | DNA topoisomerase TERM 30 20716 - 20705 - g 72 -3.6 -5.10208 | GAACTGGAAGAAAAA CGCC TAAA AGCG ATTAAATACTTAGAA PMIP26 20507 - 21022 + | HN-S family DNA-binding protein TERM 31 21038 - 21075 + F 91 -7.7 -5.16071 | overlap 21040 TCTCCCTCTCCTGCT GTCTCTTACATTGCCTG TTAT CGGGCAATGTAAGCCCC TTTTTATTGGTGATT TERM 32 21040 - 21073 + F 73 -8.9 -2.79725 | overlap 21038 TCCCTCTCCTGCTGT CTCTTACATTGCCTG TTAT CGGGCAATGTAAGCC CCTTTTTATTGGTGA PMIP27 21048 - 21599 + | hypothetical protein PMIP28 21574 - 22536 + | hypothetical protein TERM 33 22599 - 22578 - T 100 -11.5 -5.38839 | overlap 22579 CACAGAAAAAGAAAA TGCGGGGGA ATGC TCCCCCGCT AGGCATCACCGTTCT TERM 34 22598 - 22579 - T 100 -15 -3.80863 | overlap 22578 ACAGAAAAAGAAAAT GCGGGGGA ATGC TCCCCCGC TAGGCATCACCGTTC srnB 22751 - 22605 - | post-segregation killing protein TERM 35 22895 - 22871 - H 77 -8.6 -3.72576 | CTGGCTCTCACTAAA TGCTTGAACC GGACA GGATCAAGCA CCCGCTGAAAGATTA TERM 36 23122 - 23110 - H 76 -6.3 -4.67048 | TTACTGTAAAACAAA GATTC ATA GAATC GCCGGTAATCGCTCA TERM 37 23228 - 23240 + H 71 -7.7 -3.53012 | ACATTAATGTGTCTT GCATG AAA CATGC TTTAGCCACAGCAAC PMIP29 23395 - 23565 + | hypothetical protein TERM 38 24297 - 24287 - g 71 -4 -4.96848 | GGTTTTATAGAAAAA TTCT CCA AGAA AATTATAAAAGCATC PMIP30 23591 - 25057 + | putative colicin TERM 39 25065 - 25102 + T 100 -10.1 -4.96501 | opp_overlap 25087 25088 CTCATTAATTACTTT TGGTTATCTTATTTAGT TAAA ACTATCTAAGATAACCA TTTATTTTTATAAAA PMIP31 25655 - 25137 - | colicin immunity protein PMIP32 26098 - 25796 - | plasmid stabilization protein TERM 40 25927 - 25893 - G 71 -9.5 -2.9138 | overlap 25890 25888 TAGTAAATAATATGA CTTTCTACAGGAAAA CTTCT TATTCCTGTAAAAAG GTCATCACTACGATC PMIP33 26370 - 26107 - | putative antitoxin of toxin-antitoxin stability system TERM 41 26160 - 26145 - G 77 -6.2 -4.64657 | overlap 26148 TTAAAGGTGCAAAAA CATCAT CAAT ATGATG TAACTCTCCCCGTTC TERM 42 26747 - 26790 + H 86 -9.9 -3.6075 | opp_overlap 26753, overlap 26748 26768 26770 26771 TTGATTAATCACTAT TGATAATCTTTGATTATCT TGCTAT GGTTAATCAAAGATTATCG TTATATGATATTCAT TERM 43 26748 - 26789 + H 82 -11.2 -2.75727 | opp_overlap 26753, overlap 26747 26768 26770 26771 TGATTAATCACTATT GATAATCTTTGATTATCT TGCTAT GGTTAATCAAAGATTATC GTTATATGATATTCA TERM 44 26771 - 26815 + H 80 -10.3 -2.67365 | opp_overlap 26753, overlap 26748 26747 26770 26768 TTGATTATCTTGCTA TGGTTAATCAAAGATTATCGT TAT ATGATATTCATTGATTAATCA CTGTTGTTAATCCTT TERM 45 26985 - 26953 - g 82 -4.2 -5.4505 | gap 1, opp_overlap 26954, overlap 26954 TGTTGCAACAAAAAA CTGCGTCTG-TCGCA TTAG TGCGAACAGACAAAA ACGAAGATTTGAATA TERM 46 27419 - 27404 - g 71 -7.6 -3.8822 | CATATCAAACTTAAA GGCTTT TGAA AAAGCC ATAAATGAAGGGCTG PMIP34 26868 - 27530 + | putative plasmid stability/partitioning protein TERM 47 27584 - 27535 - f 72 -3.7 -5.13473 | opp_overlap 27544 27561, overlap 27537 27544 27560 27580 AGGATAGCTAAAAAA CATTGGAAATCATTGATTAATCA TATC TGATTAATCAATGATTAACTCAG TATTGAGGTGGATTA TERM 48 27575 - 27544 - f 100 -14.8 -3.74198 | opp_overlap 27544 27561, overlap 27537 27535 27560 AAAAAACATTGGAAA TCATTGATTAATCA TATC TGATTAATCAATGA TTAACTCAGTATTGA TERM 49 27544 - 27575 + F 100 -14.8 -3.09987 | opp_overlap 27544 27537 27535 27560, overlap 27561 AAAAAACATTGGAAA TCATTGATTAATCA TATC TGATTAATCAATGA TTAACTCAGTATTGA PMIP35 27604 - 27882 + | putative plasmid stability/partitioning protein TERM 50 27880 - 27900 + F 84 -3.3 -5.83211 | ATAGAGGTAATGAGG TAACTACAA TGT TAGTGGTTA TTTTTTATTTTGGTG TERM 51 28102 - 28065 - g 76 -3.6 -5.22258 | gap 2, opp_overlap 28075, overlap 28075 TAAACGAAAACAAAA GAGCGC-A-AAAGCCGTT TTAG AACGGCTTTCTGGCATTC ATGAATTTAGTCAAA TERM 52 28075 - 28090 + G 79 -9 -3.93236 | opp_overlap 28075 28065 CAAAAGAGCGCAAAA GCCGTT TTAG AACGGC TTTCTGGCATTCATG TERM 53 28090 - 28075 - g 85 -9 -4.23434 | opp_overlap 28075, overlap 28065 CAAAAGAGCGCAAAA GCCGTT TTAG AACGGC TTTCTGGCATTCATG PMIP36 27952 - 28479 + | putative endonuclease TERM 54 28485 - 28471 - T 74 -7.1 -4.14739 | opp_overlap 28459 28470 CTACTCACGGTAAAA CCGGA GTAAT TCCGG ATGTGTTAAAGCATC PMIP37 28812 - 28456 - | hypothetical protein TERM 55 28777 - 28799 + g 81 -2.9 -5.64274 | gap 1, overlap 28780 ATTGACCGTTTCAAT TTG-GTTTTT ATTT AAAAACTCAA TTTTTTTATACATAC PMIP38 29991 - 28822 - | putative relaxase/mobilisation nuclease TERM 56 29072 - 29082 + g 76 -3.2 -5.22943 | GGTACTTTTACTTCT TCTG AAC CGGA TTTTTTGAGTTTAAT PMIP39 30655 - 29981 - | hypothetical protein PMIP40 31154 - 30885 - | hypothetical protein TERM 57 31087 - 31101 + g 87 -5 -5.40072 | GCGTGGCGGTTTAAG TTATCC TCG GGATGA TTTTTTTGAGCAGAA TERM 58 31269 - 31250 - R 100 -10.7 -5.46706 | ACCCGAAAAGAAAAA CAGGGGC GGTTAA GCCCCTG CGAAGTGTATTTTCA PMIP41 31543 - 31259 - | putative transcriptional regulator PMIP42 31841 - 31545 - | hypothetical protein TERM 59 31946 - 31929 - R 95 -5.5 -6.06723 | opp_overlap 31927 31929 TTTTTTAAAAAAAAA GGGGC TTTATTTT GCCCC TGTGATTATTTTTTT PMIP43 32097 - 31963 - | hypothetical protein TERM 60 32123 - 32167 + r 74 -6.5 -4.36586 | gap 1, opp_overlap 32123 32158, overlap 32124 32124 32156 CTTTCGTTGATTTAA TG-TGTTCGCTGTTAAGGGG GGGCAA CCCCTTAACAGCGCCTAGCG TTGTTTTAGTTGTCT TERM 61 32156 - 32170 + r 82 -7.8 -4.53034 | opp_overlap 32123 32158, overlap 32124 32124 32123 GGGGCAACCCCTTAA CAGCGC CTA GCGTTG TTTTAGTTGTCTACC PMIP44 32517 - 32173 - | hypothetical protein TERM 62 32529 - 32564 + r 100 -14.2 -2.9568 | opp_overlap 32537, overlap 32533 32537 TCATTTTACTGTCTC CTATTGAATGCCAGTG TTGC CACTGGCATTTATTAG ATTAGTTTTATTTTT TERM 63 32533 - 32560 + r 100 -13.6 -3.29386 | opp_overlap 32537, overlap 32529 32537 TTTACTGTCTCCTAT TGAATGCCAGTG TTGC CACTGGCATTTA TTAGATTAGTTTTAT TERM 64 32537 - 32556 + r 100 -12.2 -4.26953 | opp_overlap 32537, overlap 32533 32529 CTGTCTCCTATTGAA TGCCAGTG TTGC CACTGGCA TTTATTAGATTAGTT TERM 65 32556 - 32537 - R 90 -12.2 -3.05384 | opp_overlap 32537 32533 32529 CTGTCTCCTATTGAA TGCCAGTG TTGC CACTGGCA TTTATTAGATTAGTT PMIP45 32673 - 32581 - | hypothetical protein TERM 66 32696 - 32709 + r 77 -3.9 -5.4756 | opp_overlap 32696 GATAAAATATAATGA TGAAT TAAA ATTCA TTTTTTCTTGGAATT PMIP46 32839 - 32678 - | hypothetical protein PMIP47 33026 - 32844 - | hypothetical protein PMIP48 33353 - 33159 - | hypothetical protein PMIP49 33627 - 33397 - | putative transcriptional regulator PMIP50 33883 - 33617 - | hypothetical protein PMIP51 34474 - 33905 - | hypothetical protein TERM 67 34520 - 34487 - R 95 -12 -3.68325 | gap 1 CATAGCTTAATATAA TTTTTTA-GGCGGGT TCGAT ACCCGCCATAAAAAA CAGGCTTAGATATCA PMIP52 34732 - 34526 - | hypothetical protein TERM 68 34761 - 34774 + r 75 -9.5 -2.83641 | opp_overlap 34752, overlap 34742 TGAATACCTGATTCA GGGGC TTTC GCCCC TGTCGTAATAGGTTA PMIP53 35311 - 34787 - | DnaJ-like protein