TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.346259 %AT, 4424479 nt, 34696 terms. Intergenic: 0.400822 %AT, H2T: 409812 nt, 4218 terms; T2T: 112471 nt, 2703 terms; H2H: 144336 nt, 2762 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|146305042|ref|NC_009439.1| Pseudomonas mendocina ymp, complete genome (length 5072807) dnaA 82 - 1566 + | chromosomal replication initiation protein Pmen_0002 1601 - 2704 + | DNA polymerase III subunit beta TERM 1 3130 - 3151 + G 72 -5.1 -4.3739 | overlap 3131 AGTTTCTCGATTGGG GGGTGTTCC ACGT GGAACATCG TTTTCTCGGCGCCTG recF 2712 - 3815 + | recombination protein F gyrB 3820 - 6240 + | DNA gyrase subunit B TERM 2 6287 - 6259 - T 87 -10.2 -4.36914 | opp_overlap 6260 6261, overlap 6260 6261 6264 GCTCGCCGCACAAAA GCGAACCCCGGC CTTGT GCCGGGGTTCTG TTTTTCTGCCCTATG TERM 3 6286 - 6260 - T 78 -13.7 -3.21934 | opp_overlap 6260 6261, overlap 6259 6261 6264 CTCGCCGCACAAAAG CGAACCCCGGC CTTGT GCCGGGGTTCT GTTTTTCTGCCCTAT TERM 4 6260 - 6287 + T 100 -13.5 -4.8667 | gap 1, opp_overlap 6260 6259 6261 6264, overlap 6261 CTCGCCGCACAAAAG C-GAACCCCGGC CTTGT GCCGGGGTTCTG TTTTTCTGCCCTATG TERM 5 6261 - 6285 + T 100 -17.2 -4.05067 | opp_overlap 6260 6259 6261 6264, overlap 6260 TCGCCGCACAAAAGC GAACCCCGGC CTTGT GCCGGGGTTC TGTTTTTCTGCCCTA TERM 6 6285 - 6261 - T 83 -17.2 -2.52946 | opp_overlap 6261 6260, overlap 6260 6259 6264 TCGCCGCACAAAAGC GAACCCCGGC CTTGT GCCGGGGTTC TGTTTTTCTGCCCTA TERM 7 6282 - 6264 - T 76 -13.1 -3.41587 | opp_overlap 6261 6260, overlap 6261 6260 6259 CCGCACAAAAGCGAA CCCCGGC CTTGT GCCGGGG TTCTGTTTTTCTGCC TERM 8 6452 - 6479 + T 86 -13.6 -3.48276 | opp_overlap 6459, overlap 6459 GATGTCGGAAGGTCA TAAAAAACCCGC CTCG GCGGGTTTTTTG TTGTCTGCGAAAACG TERM 9 6472 - 6459 - T 100 -9.5 -5.27923 | opp_overlap 6452 6459 GAAGGTCATAAAAAA CCCGC CTCG GCGGG TTTTTTGTTGTCTGC TERM 10 6459 - 6472 + T 100 -9.5 -5.60689 | opp_overlap 6459, overlap 6452 GAAGGTCATAAAAAA CCCGC CTCG GCGGG TTTTTTGTTGTCTGC TERM 11 6517 - 6493 - T 76 -9.2 -4.07568 | overlap 6494 TGTTGTCTGCGAAAA CGGCGGGCCC TCCCT AGGCCCACCA GTAACGCACCATATG Pmen_0005 7438 - 6506 - | phosphatidate cytidylyltransferase Pmen_0006 8063 - 7440 - | phospholipid/glycerol acyltransferase Pmen_0007 8507 - 8073 - | hypothetical protein Pmen_0008 9834 - 8497 - | dual specificity protein phosphatase TERM 12 9280 - 9259 - G 71 -9.3 -3.83568 | CCACAGGCAGAAGAA GCCCGCCAG CGCC CCGGTGGGC AGGTCGATGAAGTGA Pmen_0009 11588 - 9834 - | alpha/beta hydrolase fold TERM 13 10583 - 10554 - G 73 -12.9 -3.23274 | gap 1, overlap 10549 GCTGCCAGAATCGAA GCCGGTGTCGAAGC CCA GCTTC-ACTCCGGC CGACAGCGTACTGCC TERM 14 10771 - 10761 - G 70 -8.2 -3.96148 | GTTGCGCAGGATAAA GCGC CGC GCGC GGCTCAGGGCATGGG Pmen_0010 12219 - 11614 - | CDP-alcohol phosphatidyltransferase Pmen_0011 13197 - 12430 - | phospholipid/glycerol acyltransferase Pmen_0012 13741 - 13211 - | D,D-heptose 1,7-bisphosphate phosphatase TERM 15 13813 - 13764 - R 100 -15.8 -4.1021 | overlap 13770 13774 CGCCAGAAGCAGAAA TGGAAACC-GACGCTGGCCGCGAC AACT GCCGCGGCCAGCGCCTGGCGT-CA GCCCAGTACCGAGAT TERM 16 13807 - 13770 - R 100 -22.7 -3.90889 | overlap 13764 13774 AAGCAGAAATGGAAA CCGACGCTGGCCGCGAC AACT GCCGCGGCCAGCGCCTG GCGTCAGCCCAGTAC TERM 17 13803 - 13774 - R 100 -22.9 -2.6993 | overlap 13770 13764 AGAAATGGAAACCGA CGCTGGCCGCGAC AACT GCCGCGGCCAGCG CCTGGCGTCAGCCCA glyS 15865 - 13811 - | glycyl-tRNA synthetase subunit beta TERM 18 15004 - 14981 - G 77 -11 -3.87815 | gap 1 CGCCACGGTGATAAA GCGCGGCAGCA GCT TGCCGCC-CGC ATCGAGCAGGCAGAA glyQ 16809 - 15862 - | glycyl-tRNA synthetase subunit alpha TERM 19 16896 - 16862 - H 76 -9.8 -3.727 | GGGAGTATATCGAAA CTCGGCGCAGGCCGCA GGG TGCGGCTGGTGCAGAG CGTGGCCGAGGGCGT Pmen_0015 17057 - 17623 + | DNA-3-methyladenine glycosylase I Pmen_0016 17717 - 18604 + | lipid A biosynthesis lauroyl acyltransferase TERM 20 18625 - 18641 + F 100 -10.8 -5.00616 | opp_overlap 18625 GGACGAGATCGACAA GGCGCC TTGAT GGCGCC TTTTTTCCGCCACCC Pmen_0017 18721 - 18987 + | type IV pilus assembly PilZ TERM 21 19077 - 19056 - f 73 -4.3 -4.66609 | gap 1, overlap 19057 19058 CACCGCACTGAAAAA CGCCGCCGGC CTG GACG-CGGCA ACCCCACCGGCGATA Pmen_0018 19365 - 19931 + | NLP/P60 protein Pmen_0019 20108 - 20545 + | TIR chaperone family protein Pmen_0020 20545 - 22776 + | hypothetical protein TERM 22 22934 - 22957 + T 76 -12.4 -3.27476 | overlap 22921 GAGCCGACAGGCATT GGCCGGTGGG GTTG CTCACCGGTC TTCCTCATTGGGGAT Pmen_0021 23322 - 22972 - | hypothetical protein Pmen_0022 23528 - 23325 - | hypothetical protein Pmen_0023 25618 - 23528 - | YscC/HrcC family type III secretion outer membrane protein Pmen_0024 26045 - 25620 - | hypothetical protein Pmen_0025 26256 - 26032 - | hypothetical protein Pmen_0026 27004 - 26417 - | HrpE/YscL family type III secretion apparatus protein Pmen_0027 27527 - 26994 - | hypothetical protein TERM 23 27287 - 27318 + g 85 -18 -2.75064 | opp_overlap 27281, overlap 27285 CCGAACAGATGTGCT GCGCCAGGGCTAGC GCGT GCTGGCGCTGGCGC TCGTTCAATGCCAGC Pmen_0028 28342 - 27524 - | YscJ/HrcJ family type III secretion apparatus lipoprotein Pmen_0029 28721 - 28353 - | YscI/HrpB family type III secretion apparatus protein Pmen_0030 29664 - 28765 - | HrpZ family protein Pmen_0031 30009 - 29716 - | hypothetical protein TERM 24 30204 - 30217 + r 80 -3.7 -5.03314 | CGCGTAACGGGTTTG CCCGC GTCA GCGAG TTTTTTACCGGTGCA Pmen_0032 31210 - 30305 - | sigma-54 dependent trancsriptional regulator Pmen_0033 32523 - 31594 - | sigma-54 dependent trancsriptional regulator Pmen_0034 33268 - 32882 - | hypothetical protein Pmen_0036 35032 - 33458 - | transposase IS66 TERM 25 33951 - 33963 + g 72 -6.9 -4.20354 | overlap 33952 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_0037 35411 - 35052 - | IS66 Orf2 family protein Pmen_0038 36171 - 37328 + | TyeA family type III secretion effector delivery regulator Pmen_0039 37328 - 39412 + | HrcV family type III secretion protein Pmen_0040 39429 - 40343 + | YscD/HrpQ family type III secretion apparatus protein Pmen_0041 40340 - 41698 + | FliI/YscN family ATPase Pmen_0042 41701 - 42147 + | hypothetical protein TERM 26 42166 - 42144 - g 73 -6.2 -4.36411 | GATCAACGATGAAAA CTGAACACGC AGC GCGCCCTCAG CTGATGCAAACCCTG Pmen_0043 42137 - 42673 + | hypothetical protein Pmen_0044 42670 - 43386 + | hypothetical protein Pmen_0045 43376 - 43777 + | surface presentation of antigens (SPOA) protein Pmen_0046 43774 - 44427 + | type III secretion system protein Pmen_0047 44435 - 44698 + | HrpO family type III secretion protein Pmen_0048 44699 - 45499 + | type III secretion protein SpaR/YscT/HrcT Pmen_0049 45496 - 46575 + | YscU/HrpY family type III secretion protein TERM 27 46767 - 46752 - f 74 -3.2 -4.7373 | CCACTTCATGAAAAA GGACAT CGAC ATGACC CTGATTCCTGCGTCG Pmen_0050 46762 - 47412 + | hypothetical protein Pmen_0051 47766 - 47452 - | TPR repeat-containing protein trkA 49228 - 47855 - | potassium transporter peripheral membrane component TERM 28 48078 - 48126 + g 70 -9.9 -3.70902 | TTGGCATCGCCGTGG GCGATCACCTCCAGGGCCTCGGC GGC GCCGCGGCGCAGGCTGTGCACGC TTTCGATATCGCCGC Pmen_0053 50553 - 49240 - | sun protein TERM 29 49398 - 49414 + g 70 -6.5 -4.18197 | TACGGGCGAGGAAGG CGGCGAT GGT GTCGCTG TTTTCCGTCGGCAGT TERM 30 50218 - 50233 + g 76 -6.1 -4.56597 | CACGGCGTTGAGCAG GCCCT TGGCCC AGGGC TTTTTCAGCGCGCCG fmt 51494 - 50550 - | methionyl-tRNA formyltransferase TERM 31 51532 - 51515 - R 100 -11.3 -5.27335 | opp_overlap 51515 CTCGCTAAAGAAAAA GGCTTGC CGTG GCAAGCC TTCTGGATGGGGCGT TERM 32 51515 - 51532 + r 72 -11.3 -3.35798 | opp_overlap 51515 CTCGCTAAAGAAAAA GGCTTGC CGTG GCAAGCC TTCTGGATGGGGCGT def 52053 - 51547 - | peptide deformylase TERM 33 52135 - 52123 - H 76 -6.2 -4.70266 | opp_overlap 52133 AACAGCATTGAAAAA CGGC TTCAC GCCG CGTAATCAGCGGGTT Pmen_0056 52207 - 53244 + | peptidoglycan-binding LysM TERM 34 53250 - 53278 + F 100 -16.8 -3.95073 | gap 1, opp_overlap 53247, overlap 53252 CAACCCGTAATACCC G-ACGAGCCCCGC CATA GCGGGGCTCGTGC TTTCTGCCTGTGCCA TERM 35 53252 - 53275 + F 90 -19.6 -3.03459 | opp_overlap 53247, overlap 53250 ACCCGTAATACCCGA CGAGCCCCGC CATA GCGGGGCTCG TGCTTTCTGCCTGTG Pmen_0057 53331 - 54437 + | DNA protecting protein DprA Pmen_0058 54504 - 55061 + | SUA5/yciO/yrdC domain-containing protein Pmen_0059 56150 - 55173 - | alcohol dehydrogenase Pmen_0060 56295 - 57209 + | coproporphyrinogen III oxidase aroE 57317 - 58138 + | shikimate 5-dehydrogenase Pmen_0062 59982 - 58342 - | sulphate transporter Pmen_0063 60949 - 60029 - | substrate-binding region of ABC-type glycine betaine transport system Pmen_0064 62501 - 60993 - | sulfatase TERM 36 62877 - 62923 + G 75 -11.5 -3.66178 | gap 1, overlap 62878 GACAGCGGCCTGCAG GCGGTGGTCGCGCGGCAGCAGC ATGA GGTGCTGCAG-GTGGCCACCGA TTTCGCCTTCGCCGC TERM 37 62878 - 62922 + G 72 -15 -2.79492 | gap 1, overlap 62877 ACAGCGGCCTGCAGG CGGTGGTCGCGCGGCAGCAGC ATGA GGTGCTGCAG-GTGGCCACCG ATTTCGCCTTCGCCG Pmen_0065 62616 - 63569 + | LysR family transcriptional regulator pbpG 63685 - 64587 + | D-alanyl-D-alanine endopeptidase TERM 38 64592 - 64641 + T 86 -18.1 -2.85351 | gap 1, opp_overlap 64607, overlap 64607 CCGCGCAGTGACCTG GCGCTGATGCAAAAAGGGCGACTC GAT GAGTCGCCCTTTTTTCGTT-GTGC TGTCGTGTAGCCGAA TERM 39 64627 - 64607 - T 100 -16.9 -4.65895 | opp_overlap 64592 64607 GCGCTGATGCAAAAA GGGCGACTC GAT GAGTCGCCC TTTTTTCGTTGTGCT TERM 40 64607 - 64627 + T 100 -16.9 -5.33848 | opp_overlap 64607, overlap 64592 GCGCTGATGCAAAAA GGGCGACTC GAT GAGTCGCCC TTTTTTCGTTGTGCT Pmen_0067 65592 - 64684 - | LysR family transcriptional regulator Pmen_0068 65802 - 66605 + | aldo/keto reductase Pmen_0069 67420 - 66677 - | short-chain dehydrogenase/reductase SDR TERM 41 67553 - 67527 - R 100 -14.5 -5.32944 | gap 1, opp_overlap 67527 GGCATAACGAAAAAA CCGCTGC-CCTG GCGC CAGGTGCAGCGG TTTCTCTTGCCGCGG TERM 42 67527 - 67553 + r 100 -14.5 -4.1891 | gap 1, opp_overlap 67527 GGCATAACGAAAAAA CCGCTGC-CCTG GCGC CAGGTGCAGCGG TTTCTCTTGCCGCGG trpA 68385 - 67576 - | tryptophan synthase subunit alpha Pmen_0071 69617 - 68382 - | tryptophan synthase subunit beta Pmen_0072 69732 - 70400 + | hypothetical protein TERM 43 70600 - 70572 - g 71 -13.7 -2.82623 | overlap 70569 70588 CCTGTTCGACAAGGA CGGCCGCGGCGTG AAA CTCACCGAGGCCG GGGTGCGCCTGCGCG TERM 44 71158 - 71187 + G 81 -16.3 -3.14132 | GTGGCGGACGATCTG GCCGCCGGGCGCC TGCT GGCGCCCTGGGGC TTCGTCGAGACAGGG Pmen_0073 70405 - 71316 + | LysR family transcriptional regulator Pmen_0074 71370 - 71609 + | hypothetical protein Pmen_0075 71708 - 71923 + | hypothetical protein Pmen_0076 72869 - 71892 - | NAD-dependent epimerase/dehydratase TERM 45 73035 - 73023 - H 76 -9.1 -4.09864 | AGTGAGTGGCGAAAA TGGCC ATT GGCCA TGATGATGCGTGCCA Pmen_0077 73153 - 73734 + | hypothetical protein TERM 46 73820 - 73802 - T 73 -10.2 -3.63569 | overlap 73803 GGAATGCTGTAAGAA CGGTGCGC GCG GCGCACCC TACGACGGCCCTCAG TERM 47 73819 - 73803 - T 73 -13.7 -2.7782 | overlap 73802 GAATGCTGTAAGAAC GGTGCGC GCG GCGCACC CTACGACGGCCCTCA Pmen_0078 75201 - 73972 - | nucleoside recognition domain-containing protein TERM 48 75133 - 75117 - G 72 -13.7 -3.02144 | CCATGGCGCCGAACA CGGTGGC GTC GCCACCG ATCAGCCAGCGGGCC Pmen_0079 75827 - 75366 - | hypothetical protein Pmen_0080 76002 - 75838 - | hypothetical protein Pmen_0081 76294 - 76022 - | hypothetical protein Pmen_0082 76571 - 76972 + | thioesterase superfamily protein Pmen_0083 77680 - 77048 - | two component LuxR family transcriptional regulator Pmen_0084 79070 - 77721 - | integral membrane sensor signal transduction histidine kinase TERM 49 79579 - 79548 - R 80 -10.8 -4.07568 | opp_overlap 79553 79555, overlap 79550 79553 TGCCTTGGCTCAAAA GAGAAGACCCGGCG ATTG CACCGGGTCTTCGA TAGTCGCCACGCTAG TERM 50 79577 - 79550 - R 100 -17.8 -3.63744 | opp_overlap 79553 79555, overlap 79548 79553 CCTTGGCTCAAAAGA GAAGACCCGGCG ATTG CACCGGGTCTTC GATAGTCGCCACGCT TERM 51 79574 - 79553 - R 91 -13.7 -3.95435 | opp_overlap 79553 79555, overlap 79550 79548 TGGCTCAAAAGAGAA GACCCGGCG ATTG CACCGGGTC TTCGATAGTCGCCAC Pmen_0085 80740 - 79640 - | TRAP dicarboxylate transporter- DctP subunit TERM 52 80647 - 80658 + g 84 -7.2 -4.77216 | overlap 80646 80654 TCGAGCCCTCTTGGG GCGC AGCG GCGC TTTTTGCCTCTTCTT Pmen_0086 80925 - 81467 + | tripartite ATP-independent periplasmic transporter DctQ Pmen_0087 81460 - 82836 + | TRAP dicarboxylate transporter, DctM subunit TERM 53 82853 - 82885 + F 95 -15.6 -3.87373 | overlap 82859 TCATACATCGCAGTT GCCAGACGCCCGTC CTCGT GACGGGCGTTTTGC TTTGTGCGCCGTCTG TERM 54 82859 - 82879 + F 100 -14 -4.61873 | overlap 82853 ATCGCAGTTGCCAGA CGCCCGTC CTCGT GACGGGCG TTTTGCTTTGTGCGC Pmen_0088 82941 - 83843 + | aldose 1-epimerase Pmen_0089 84279 - 85841 + | ImpA domain-containing protein Pmen_0090 85896 - 86402 + | hypothetical protein TERM 55 87235 - 87219 - g 89 -10.1 -4.48987 | CGTCTACAAGGAAAA CGTGGCC AAC AGCCACG AGCACTACCTGTGGG Pmen_0091 86428 - 87906 + | hypothetical protein TERM 56 88028 - 88079 + G 72 -11.8 -3.56643 | gap 4, opp_overlap 88025, overlap 88040 ATCTGGCCAAGATGC TC-AGCA-CCCGT-G-CGGGCAGCGT GCAG ACGCTGCCCGACTACGGGCTGCCCGA TTTGAACGATATGCG Pmen_0092 87913 - 88341 + | GPW/gp25 family protein Pmen_0093 88331 - 89776 + | hypothetical protein Pmen_0094 89769 - 90155 + | hypothetical protein TERM 57 90262 - 90275 + GF 79 -9.5 -4.15044 | TTGCCGAGCGCAGCC CGGCG CTGG CGCCG TTTCTTGGCCAGGCC Pmen_0095 90186 - 91976 + | hypothetical protein TERM 58 92699 - 92722 + GF 77 -11 -3.58037 | gap 1 AAGTTCCGCATCCAC GTGCG-CCAGC TGG GCTGGACGCGC TTTCACGAGTTCCTG Pmen_0096 91940 - 92947 + | hypothetical protein Pmen_0097 92959 - 95559 + | ATPase Pmen_0098 95546 - 97078 + | Fis family transcriptional regulator Pmen_0099 97126 - 97260 + | hypothetical protein TERM 59 97265 - 97249 - f 82 -11.5 -3.92522 | CCGCAAGCCGAGAAA CGCGGCC ACT GACCGCG AGGAGCACAGTCACC Pmen_0100 97281 - 98477 + | FHA domain-containing protein Pmen_0101 98483 - 98965 + | hypothetical protein Pmen_0102 98962 - 100293 + | hypothetical protein Pmen_0103 100296 - 101177 + | hypothetical protein TERM 60 102855 - 102819 - g 74 -12.1 -3.57144 | overlap 102820 GCGCCGAGCTGGAAA CCCTGCTGCTGCCTCGC GTG GCGCGGCAGCTGGAGGC GCAGATCCGCGCCAA TERM 61 102854 - 102820 - g 75 -15.6 -2.74144 | overlap 102819 CGCCGAGCTGGAAAC CCTGCTGCTGCCTCGC GTG GCGCGGCAGCTGGAGG CGCAGATCCGCGCCA Pmen_0104 101174 - 104713 + | ImcF domain-containing protein TERM 62 104901 - 104853 - g 73 -12.4 -3.40403 | GGGCGGGCACCAGAA CGGC-GCCCTGGCCAGCCGCCTGA TCG TCGAGCAGCTGGCC-GAGCTGGCG CAGGGCAGCCTGGAG TERM 63 105207 - 105157 - g 86 -17.6 -3.19389 | overlap 105145 CAACTGATCGACGAA CAGGGCCTGACGCCGC-AGGAGGC CGCGC GCCACCCGGCGGCG-CATGCCCTG ACCCGCGCCATCGGC Pmen_0105 104713 - 105441 + | protein phosphatase 2C domain-containing protein Pmen_0106 105438 - 106409 + | protein kinase Pmen_0107 106434 - 108515 + | Rhs element Vgr protein TERM 64 109015 - 109035 + G 73 -3.9 -4.59109 | overlap 108983 108981 108980 109029 GAGCACAGAAAGCGC GACAGCC AGTGAAG GGCTGAC TTTTTACAGCCTGTA TERM 65 111030 - 111016 - g 71 -2.8 -4.64657 | overlap 111018 TGAAAGTTTTAAAAA CAGC TCAAGTT GCTG CGAGCTATCTACCGA Pmen_0108 108566 - 111730 + | glycoside hydrolase family protein Pmen_0109 111727 - 112542 + | hypothetical protein TERM 66 112670 - 112699 + G 76 -2.2 -4.96848 | gap 1, opp_overlap 112677, overlap 112671 TATGCTTTCCGTTAG T-GGTAAATGGCT CGGAA AGCCATATGCCTA TTTTTATGTGCAAAA TERM 67 112987 - 112976 - g 100 -3 -5.7946 | TGGTCAAGAAAAAAA CTAA GTAC TTAG CCTATATAGACTGCG Pmen_0110 112621 - 113043 + | hypothetical protein Pmen_0111 113171 - 113710 + | hypothetical protein Pmen_0112 113794 - 114204 + | hypothetical protein TERM 68 114712 - 114734 + G 70 -11.2 -3.53012 | AACGGCCATCGATCT GCAGGGCGAG CGC CATGCCCTGC TTTCGCCCACCACCC TERM 69 114880 - 114841 - g 82 -16.6 -3.21747 | gap 1, overlap 114877 CGACGGCACCACGAA GTCGTTCGCGCTGAGCCAG ATC CTG-CTCAACGAGAACGAC ACCCAGTGCGACCAG Pmen_0113 114401 - 115450 + | hypothetical protein Pmen_0114 115928 - 115461 - | hypothetical protein Pmen_0115 116483 - 115947 - | hypothetical protein Pmen_0116 116817 - 116572 - | transglycosylase-associated protein Pmen_0117 117647 - 116883 - | amino acid ABC transporter periplasmic protein TERM 70 117463 - 117451 - G 70 -10.5 -3.72695 | opp_overlap 117460 AGGCTGCGCAGGAAA GGCGC CTG GCGCC AGTGCAGGCGCACGC Pmen_0118 118788 - 117703 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Pmen_0119 119279 - 118788 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 71 119359 - 119322 - H 100 -12.7 -4.72272 | opp_overlap 119329, overlap 119326 119329 GCGGCGCATCAAAAA CCAACAAGCCACGCGGG CGGG CCAGCGTGGCTTGTCAT GATTCGTTGGCCGGG TERM 72 119355 - 119326 - H 100 -17.9 -3.84901 | opp_overlap 119329, overlap 119322 119329 CGCATCAAAAACCAA CAAGCCACGCGGG CGGG CCAGCGTGGCTTG TCATGATTCGTTGGC TERM 73 119352 - 119329 - H 95 -13.8 -4.03474 | opp_overlap 119329, overlap 119326 119322 ATCAAAAACCAACAA GCCACGCGGG CGGG CCAGCGTGGC TTGTCATGATTCGTT TERM 74 119329 - 119352 + H 86 -13.8 -3.48342 | opp_overlap 119329 119326 119322 ATCAAAAACCAACAA GCCACGCGGG CGGG CCAGCGTGGC TTGTCATGATTCGTT Pmen_0120 119556 - 120578 + | alcohol dehydrogenase TERM 75 120622 - 120643 + F 70 -12.3 -2.83908 | opp_overlap 120624, overlap 120610 120624 GCCGAGCGTCGCACA GACCGCAGT TCGG GCTGCGGTC TATACTGCTCACTTT Pmen_0121 120683 - 121477 + | hypothetical protein Pmen_0122 121557 - 122549 + | AraC family transcriptional regulator TERM 76 122905 - 122926 + F 85 -6.5 -4.76041 | gap 1, overlap 122906 122906 ATTGCATCCGGGCGT AG-GGTGCGC CGT GCGCACCGCG TTTTTCCTGGATCTG TERM 77 122906 - 122925 + F 70 -10 -3.44902 | gap 1, overlap 122906 122905 TTGCATCCGGGCGTA G-GGTGCGC CGT GCGCACCGC GTTTTTCCTGGATCT TERM 78 123734 - 123714 - g 95 -9.7 -5.0133 | CAGGGCCGCAAAAAA GTCGCCATC CTC GATGTCGAC TACCACCACGGCAAC Pmen_0123 123150 - 124178 + | histone deacetylase superfamily protein Pmen_0124 124242 - 125336 + | extracellular solute-binding protein Pmen_0125 126345 - 125368 - | transcriptional regulator TERM 79 126307 - 126283 - G 71 -9.2 -3.89346 | opp_overlap 126292 126293 GGCGCATTCGAGAAA CTCCAGCGCC GCCGA GACGCTGGTG GCCGAGCAGCGCTCG TERM 80 126359 - 126378 + H 71 -9.2 -3.82419 | overlap 126349 126361 ATCCTTCCCGCCCCG CTGGCGGA ATTA TCCGCCTG TTATTGGTCGTTTTT TERM 81 126361 - 126376 + H 70 -10.4 -3.47416 | overlap 126349 126359 CCTTCCCGCCCCGCT GGCGGA ATTA TCCGCC TGTTATTGGTCGTTT Pmen_0126 126485 - 127327 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Pmen_0127 128371 - 127469 - | LysR family transcriptional regulator aspA 128663 - 130087 + | aspartate ammonia-lyase TERM 82 130097 - 130128 + F 100 -17.4 -3.55444 | gap 1, opp_overlap 130097, overlap 130102 GGCTGATTCATCGAA TGACGCACGCCGCCC CTT GGGCGGCGTGT-TCA TTTCCGCCCTCGAGC TERM 83 130128 - 130097 - f 80 -15.2 -3.07816 | gap 1, opp_overlap 130097 130102 GGCTGATTCATCGAA TGACGCACGCCGCCC CTT GGGCGGCGTGT-TCA TTTCCGCCCTCGAGC TERM 84 130102 - 130124 + F 100 -20.6 -3.51708 | opp_overlap 130097, overlap 130097 ATTCATCGAATGACG CACGCCGCCC CTT GGGCGGCGTG TTCATTTCCGCCCTC Pmen_0129 130216 - 131469 + | sodium:dicarboxylate symporter TERM 85 131512 - 131531 + T 100 -13.6 -5.44119 | CAGCCTCAACCTTCA GGGATGGC CTCG GCCATCCC TTTTTTTGGCCTGCC Pmen_0130 133072 - 131600 - | GntR family transcriptional regulator TERM 86 132370 - 132413 + g 91 -11.6 -4.18018 | gap 1 CGCCGCACAGCTGCG CGCCGGCCACCGCGAAGGC ATGGCCC GCCG-CGCGGTAGCCGGGG TTTTCGATGGCCACG TERM 87 133375 - 133398 + G 72 -13.8 -3.03124 | overlap 133383 ACTGGCGCGACCTGG CCGCCGGCGC CGAG GCGCTGGTGG TGTTCAGCGGTGCGG Pmen_0131 133170 - 133802 + | FMN-binding negative transcriptional regulator Pmen_0132 133822 - 134262 + | GCN5-related N-acetyltransferase Pmen_0133 134262 - 134933 + | GCN5-related N-acetyltransferase Pmen_0134 135756 - 134938 - | helix-turn-helix domain-containing protein TERM 88 135919 - 135899 - H 77 -3.9 -4.87665 | overlap 135902 TCCCATTCAGAAAAA CAAGAGAGA AAG CCTCCCATG CTCGATCTTCTCAAT TERM 89 135916 - 135902 - H 70 -4.2 -4.5448 | overlap 135899 CATTCAGAAAAACAA GAGAGA AAG CCTCCC ATGCTCGATCTTCTC TERM 90 136262 - 136297 + G 73 -12.4 -3.41878 | gap 1, opp_overlap 136259 136258 CAGCTGTACAAGCGC CGCGAGGCCGACGGCGG CTA CCGCGG-CGGCCCGGCG TTCTACATTCAGCAC Pmen_0135 135917 - 137359 + | amino acid carrier protein TERM 91 137374 - 137401 + F 78 -14.2 -3.19889 | opp_overlap 137377 137380, overlap 137380 AGTTGACCTGATACG GAAGGAGGGGGC CCAG GCCCCCTTTTTC TTGGCTATGTTCCTG TERM 92 137380 - 137395 + F 100 -11.8 -5.12068 | opp_overlap 137380 137377, overlap 137374 CCTGATACGGAAGGA GGGGGC CCAG GCCCCC TTTTTCTTGGCTATG TERM 93 137562 - 137538 - g 77 -7.7 -4.4009 | opp_overlap 137530 GGCGACCCCAGAAAA CCTGCTGGTGC TTT ACACCGGCGGG ACCATTGGCATGCAG Pmen_0136 137521 - 138510 + | asparaginase Pmen_0137 138539 - 138982 + | GCN5-related N-acetyltransferase Pmen_0138 139385 - 138990 - | endoribonuclease L-PSP TERM 94 139342 - 139332 - G 75 -6.8 -4.37886 | overlap 139334 GCAGGCGTGAGAAAA CGGT GCG ACCG GTGCGGGCGCGGTGG Pmen_0139 140365 - 139457 - | glutaminase TERM 95 140252 - 140198 - G 76 -8.5 -4.18018 | opp_overlap 140215 GCTCTGGATCGAAAA CGGCGTGCGC-GCATCGCCGGCCACGT GCA AC-TGGCCATCGTTGCCGTACACGGCG ATGCCCAGCTGATCG Pmen_0140 140508 - 141437 + | auxin efflux carrier Pmen_0141 142068 - 141427 - | hypothetical protein TERM 96 142998 - 143013 + G 79 -4.6 -4.72272 | overlap 142982 143000 GCTGGTGGTGCCGGT GGGCAC CAAG GTGCGC TTTTTGATCACCGCC Pmen_0142 142477 - 143601 + | cytochrome c oxidase, subunit II TERM 97 143719 - 143689 - g 76 -14.8 -3.21099 | opp_overlap 143685 143684 143695, overlap 143695 GGTGCTGACCACCAA CCACAAGGACATCG GCA CGATGTACCTGTGG TTCAGCTTCTGCATG Pmen_0143 143606 - 145189 + | cytochrome-c oxidase Pmen_0144 145200 - 145748 + | cytochrome C oxidase assembly protein TERM 98 145993 - 145983 - g 70 -8.2 -3.95852 | ACGTGATCAAGGAAA GCCG TGC CGGC CTGTACAGCGCACAG TERM 99 146008 - 146047 + G 78 -10.1 -4.10161 | gap 1, opp_overlap 146010, overlap 146043 CCTGTACAGCGCACA GATGGACC-GCTCGTTCC GCTGG GGCATGAGCTGGTTCATC TTTTCCGAGGTGATG Pmen_0145 145760 - 146656 + | cytochrome c oxidase, subunit III Pmen_0146 146868 - 146665 - | hypothetical protein Pmen_0147 146940 - 147671 + | hypothetical protein Pmen_0148 147646 - 148227 + | hypothetical protein Pmen_0149 148264 - 149301 + | cytochrome oxidase assembly Pmen_0150 149320 - 150219 + | protoheme IX farnesyltransferase Pmen_0151 150372 - 151004 + | electron transport protein SCO1/SenC Pmen_0152 152016 - 151066 - | homoserine kinase Pmen_0153 152316 - 152032 - | hypothetical protein TERM 100 153433 - 153415 - g 81 -12.4 -3.78934 | opp_overlap 153430, overlap 153382 GTTGCGGCAGAACAA GGCCCTGG CTG CCAAGGCC GCCGTGCCGGCCGGC Pmen_0154 152534 - 155329 + | DNA polymerase I TERM 101 155548 - 155582 + T 100 -4.3 -5.75342 | opp_overlap 155548 GGTTCAGACCTTAAA CCCCGAACTTC TCCCTCCCCATAC GAAGCTCGGGG TTTTTTTTGCCCAAA TERM 102 155616 - 155602 - T 85 -3.4 -5.40072 | opp_overlap 155604, overlap 155603 155604 TTTTGCCCAAAAAAA GCTGCC GCT AGCGGC ATTCTGATGACCCTC TERM 103 155715 - 155771 + T 84 -17.2 -2.7185 | gap 1 CGGCTACAGTTCCGT AGGGTGCGCCGTGCGCACCGGATACCC CCTA GGGTCTC-GGTGCGCACAGCCCCCCCC TACTTCAGGCCTCCT Pmen_0155 156426 - 155776 - | GTPase EngB Pmen_0156 156671 - 156961 + | cytochrome c5-like protein Pmen_0157 157010 - 157615 + | cytochrome c, class I TERM 104 157652 - 157681 + F 77 -15.1 -2.71791 | opp_overlap 157658, overlap 157658 TGTTGCAGTTGGTAA GACAAAGGGTGGC CGCG GCCACCCTTTTTC ATTTGCGCCGCGGCT TERM 105 157658 - 157675 + F 100 -12.7 -4.98531 | opp_overlap 157658, overlap 157652 AGTTGGTAAGACAAA GGGTGGC CGCG GCCACCC TTTTTCATTTGCGCC TERM 106 157675 - 157658 - f 95 -12.7 -4.19177 | opp_overlap 157658 157652 AGTTGGTAAGACAAA GGGTGGC CGCG GCCACCC TTTTTCATTTGCGCC TERM 107 158267 - 158252 - g 72 -6.8 -4.23758 | overlap 158261 AGGCCAGATGGAAAA GGCCAA GAAG CTGGCC ATGGCCTACCAGATC Pmen_0158 157755 - 158405 + | DSBA oxidoreductase TERM 108 158953 - 158916 - g 72 -14 -3.04144 | GGGCGAGGGCGAACA CGCCCTGTGCGTGGTG ATGATG CACCTCGCCCTGGGCG CGCGTACCCGTACCC Pmen_0159 158425 - 159297 + | endonuclease/exonuclease/phosphatase Pmen_0160 160971 - 159403 - | transposase IS66 TERM 109 159896 - 159908 + g 72 -6.9 -4.20354 | overlap 159897 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_0161 161350 - 160991 - | IS66 Orf2 family protein TERM 110 162591 - 162569 - g 70 -13.4 -3.07816 | opp_overlap 162565, overlap 162572 TCTGGAGGCACTCAA GCAGGCGCTG GAG CAGCGCCTGG ACGGTCTGCTGCAGA Pmen_0162 161388 - 163232 + | diguanylate cyclase Pmen_0163 164761 - 163250 - | uracil-xanthine permease TERM 111 165443 - 165467 + G 84 -9.3 -4.43844 | overlap 165444 CGACGGCATTCATCC TGCTGCAGG CGTCGTT CCTGCAGCG TTTTCTCGGTAATCG Pmen_0164 164992 - 165582 + | multiple antibiotic resistance (MarC)-related protein Pmen_0165 165579 - 166361 + | N-acetylmuramoyl-L-alanine amidase Pmen_0166 166769 - 166365 - | hypothetical protein TERM 112 166805 - 166830 + r 86 -14.7 -3.35996 | overlap 166806 GTTGCGCCGAGCCTG GCCTTGCCGCC GGGC GGCGGCAAGGG TTATCGATACCCCTG TERM 113 166806 - 166829 + r 85 -18.2 -2.61383 | overlap 166805 TTGCGCCGAGCCTGG CCTTGCCGCC GGGC GGCGGCAAGG GTTATCGATACCCCT Pmen_0167 167545 - 166883 - | hypothetical protein Pmen_0168 167987 - 167580 - | response regulator receiver protein TERM 114 169208 - 169234 + G 77 -10 -3.9009 | GAACTGGCATTCATG CGCGTGCTCGAG CCT CGCGAGCGCGAG TTTCTCGAATCCATT TERM 115 170154 - 170140 - g 71 -12.8 -3.21747 | CGACGGCACCACCAA CCGCCG TTA CGGCGG TACCGGCCTGGGGCT Pmen_0169 168101 - 171607 + | multi-sensor hybrid histidine kinase Pmen_0170 171607 - 172416 + | MCP methyltransferase, CheR-type TERM 116 172892 - 172838 - g 77 -15.5 -3.06796 | gap 1, overlap 172841 GCTCACCGGAGCCAA CGAGGACGGCGCGGCCGGCCTGCTGG CGAT CCAGCGGGCCGGCGGC-CTGACCCTG GTACAGGACCCCGCC TERM 117 172889 - 172841 - g 85 -18 -2.75382 | gap 1, overlap 172838 CACCGGAGCCAACGA GGACGGCGCGGCCGGCCTGCTGG CGAT CCAGCGGGCCGGCGGC-CTGACC CTGGTACAGGACCCC Pmen_0171 172413 - 173024 + | CheB methylesterase Pmen_0172 173018 - 174205 + | response regulator receiver sensor signal transduction histidine kinase TERM 118 174223 - 174262 + F 83 -2.8 -5.27023 | gap 1 GTGCAAATTGCATGT GTCGCGTTTCATGCATCTT GCA AAG-TGCAAGGCAGGCGGC TTTTATTTTTCAAAT Pmen_0173 174381 - 174668 + | hypothetical protein Pmen_0174 174687 - 174872 + | hypothetical protein Pmen_0175 176694 - 174898 - | alginate biosynthesis sensor protein KinB TERM 119 176166 - 176197 + g 77 -13.7 -3.40403 | gap 1 CCGTCATCACCAGCA GGCCGGCGATCAGC CGGGA GC-GCTCGCCGGCC TTGTGCTCGGCGGCG Pmen_0176 178060 - 176708 - | two-component response regulator AlgB TERM 120 178154 - 178106 - H 89 -11.8 -4.19817 | gap 1, opp_overlap 178107, overlap 178107 GTTAGTCAGGTAAAA GTCGTGCAAGTTGCACGGTAGTA TGCC TGCAACCCTGCAACCTGCACG-C AGGGGGCGCCTGATA Pmen_0177 178271 - 179101 + | transport-associated Pmen_0178 179167 - 179601 + | hypothetical protein TERM 121 179620 - 179646 + F 100 -15.8 -5.07486 | CAGTGCGTCATCCGA GCCCCTGCAGGC ATT GCGTGCGGGGGC TTTTTATTGGGGCTG TERM 122 179824 - 179840 + F 80 -15.1 -3.08133 | CACCCCTACATCCGG CCCCGGC TGC GCCGGGG TTCCCTCGCTCCATC TERM 123 180161 - 180146 - f 70 -10.4 -3.53012 | opp_overlap 180146 GCGGCCCCGCTTAAA GGGCCA GGGA TGGCCC TTGTAAGCCGGCCCC Pmen_0179 180505 - 181473 + | phosphate binding protein TERM 124 181536 - 181504 - f 70 -9.8 -3.49102 | gap 1, opp_overlap 181504 181509 AGACGCCTTACAGAA CGCGACCCGCC-CTC TTAG GAGTGGCGGGTTTCG TCATGTCAGCTGACT TERM 125 181509 - 181531 + F 80 -11.3 -3.81951 | gap 1, opp_overlap 181504, overlap 181504 CCTTACAGAACGCGA CCCGCC-CTC TTAG GAGTGGCGGG TTTCGTCATGTCAGC Pmen_0180 181639 - 183924 + | binding-protein-dependent transport systems inner membrane component Pmen_0181 183940 - 185616 + | phosphate ABC transporter, inner membrane subunit PstA TERM 126 185657 - 185621 - f 76 -15.1 -2.57795 | opp_overlap 185621, overlap 185617 TGGATCACTAACGCA GCTACGAGCCGCGTACC GCC GGTGCGCAGCTTGCAGC TTGTAGCTACGAACG TERM 127 185621 - 185657 + F 86 -15.1 -3.35679 | opp_overlap 185621 185617 TGGATCACTAACGCA GCTACGAGCCGCGTACC GCC GGTGCGCAGCTTGCAGC TTGTAGCTACGAACG Pmen_0182 185683 - 186516 + | phosphate ABC transporter, ATPase subunit TERM 128 186640 - 186624 - f 72 -13.7 -2.59971 | overlap 186623 186621 186617 CTTAACAACCAATAG GGTGCGC CGT GCGCACC ATGGCCATCCAAGCC Pmen_0183 186678 - 187406 + | phosphate uptake regulator, PhoU TERM 129 187424 - 187445 + F 95 -14.4 -4.06055 | GCCGCAGCTTTCGCA CGGCCCGG GACATG CCGGGCCG TTTCCTTTGCGCGAT Pmen_0184 187542 - 188450 + | response regulator receiver protein Pmen_0185 188598 - 189494 + | peptidase M23B TERM 130 190656 - 190629 - g 75 -15.6 -2.79023 | overlap 190632 GAAGGCCACCAAGGA GAAGGCGCAGAC CTTC GTCAGCGCCTTC AACGCGCTGATGACC TERM 131 190653 - 190632 - g 72 -11.5 -3.54029 | overlap 190629 GGCCACCAAGGAGAA GGCGCAGAC CTTC GTCAGCGCC TTCAACGCGCTGATG Pmen_0186 189850 - 191145 + | flagellar hook-associated 2 domain-containing protein Pmen_0187 191145 - 191543 + | flagellar protein FliS Pmen_0188 191527 - 191844 + | hypothetical protein TERM 132 192463 - 192412 - g 77 -9.9 -4.02132 | gap 1, overlap 192404 192413 GTGGAAAGCGACAAA CCCGCAGCCGGCGGCGCACCCGCC ACCCA GGCCGGCGCGCAGCCC-CTGACGG CCGAGCGCAGCCTCA TERM 133 192463 - 192413 - g 70 -13.2 -3.00797 | overlap 192404 192412 TGGAAAGCGACAAAC CCG-CAGCCGGCGGCGCACCCGCC ACCCA GGCCGGCGCGCAGCCC-CTGACGG CCGAGCGCAGCCTCA Pmen_0189 191848 - 192906 + | flagellar hook-length control protein Pmen_0190 192934 - 193410 + | hypothetical protein Pmen_0191 193427 - 194161 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Pmen_0192 194163 - 195035 + | flagellar motor protein MotA Pmen_0193 195032 - 195973 + | OmpA/MotB domain-containing protein TERM 134 196036 - 195979 - T 100 -19.1 -3.65902 | gap 1, overlap 195980 GGGATCGTAGGGAAA TTGGTGCGCATGGCGCACCCTACGAGAC GGC GGC-CGTAGGGTGCGCCGTGGGCACCGG GCGTCCTCGGTCCGG TERM 135 196035 - 195980 - T 100 -22.6 -2.79327 | gap 1, overlap 195979 GGATCGTAGGGAAAT TGGTGCGCATGGCGCACCCTACGAGAC GGC GGC-CGTAGGGTGCGCCGTGGGCACCG GGCGTCCTCGGTCCG Pmen_0194 196528 - 196058 - | hypothetical protein Pmen_0195 197358 - 196525 - | transcriptional regulator, CadC TERM 136 197638 - 197608 - R 86 -13.3 -3.53012 | gap 1, overlap 197611 TGGCGGGGCGGGAAA CGACGACGCCCCGC GGGT GCGGGGCGTC-TGG AGGGGTGGCGCAGTC TERM 137 197636 - 197611 - R 81 -16.1 -2.90496 | overlap 197608 CGGGGCGGGAAACGA CGACGCCCCGC GGGT GCGGGGCGTCT GGAGGGGTGGCGCAG Pmen_0196 198576 - 197677 - | flagellin domain-containing protein TERM 138 198832 - 198813 - R 100 -15 -5.27335 | opp_overlap 198813 TCGCGCAAACAAAAA CGGCGACC CGAG GGTCGCCG TTTATTCGAATACCA TERM 139 198813 - 198832 + r 100 -15 -4.1822 | opp_overlap 198813 TCGCGCAAACAAAAA CGGCGACC CGAG GGTCGCCG TTTATTCGAATACCA Pmen_0197 199022 - 198855 - | rubredoxin-type Fe(Cys)4 protein Pmen_0198 200840 - 199140 - | L-lactate permease TERM 140 201010 - 200985 - R 90 -14.7 -3.55444 | opp_overlap 200985 CGCTCATGCTCGAAA GCCCCGACGGC CGGA ACCGTCAGGGC TTGTTACTGCTCCTT TERM 141 200985 - 201010 + r 80 -11.8 -3.7614 | opp_overlap 200985 CGCTCATGCTCGAAA GCCCCGACGG CCGGAA CCGTCAGGGC TTGTTACTGCTCCTT Pmen_0199 203245 - 201068 - | malate synthase G Pmen_0200 203839 - 203399 - | hypothetical protein TERM 142 203603 - 203615 + g 85 -10.5 -4.18494 | GCGGCGGCCGAGGGC GGCGC TGC GCGCC TTTTCGGTGGCGATA glcF 205093 - 203876 - | glycolate oxidase iron-sulfur subunit glcE 206152 - 205097 - | glycolate oxidase FAD binding subunit Pmen_0203 207651 - 206152 - | glycolate oxidase subunit GlcD TERM 143 207153 - 207163 + g 72 -8.2 -4.08692 | ACTTCAGGCAGTGCA CGCC GCC GGCG TTTTCGGCGACGTTG TERM 144 207411 - 207383 - G 86 -18.1 -2.87132 | GCGCCGCCGGACAGA CCGGTGCCGGCGC CGC GCGCCACCACCGG CACGGCGCGGGCATG TERM 145 207752 - 207764 + H 79 -7.7 -4.50627 | CCATCTTTGCCCATG CTGGT ATG ACCAG TTTCTTTCGTCAGTC Pmen_0204 207891 - 208664 + | DNA-binding transcriptional regulator GlcC Pmen_0205 209587 - 208742 - | SAF domain-containing protein TERM 146 209457 - 209475 + g 72 -8.9 -4.13767 | opp_overlap 209444 AGCGCCAGCGCGCAG GCGGAAA AAACC TTTCCGC TTTTCCGCTCCCGGC Pmen_0206 209639 - 209992 + | flagellar basal-body rod protein FlgB TERM 147 210105 - 210075 - g 84 -16.8 -3.14344 | overlap 210062 CACCGTGGCCAGCAA CCTGGCCAACGCCG ACT CGGCGGCGGCCAAG GCCGAGGACGTGTAC TERM 148 210340 - 210320 - g 79 -11.9 -3.7829 | overlap 210332 ACCAGATCGAGGAAA TGACCGACA TGA TGTCGGCCA CCCGCAGCTTCGAGA flgC 209995 - 210423 + | flagellar basal body rod protein FlgC TERM 149 211032 - 211048 + G 74 -10.1 -3.86897 | GTGCTGGAGATCGTC GGCATCG GCT CGGTGCC TTTCTACAACATCAC TERM 150 211071 - 211103 + G 79 -7.8 -4.52669 | overlap 211071 211074 211079 AACATCACCGAATTC GG-CCAGACGCAGACC GTC GGTCTGC-TCTGATCC TTTCTTTCCATTGTT flgD 210423 - 211100 + | flagellar basal body rod modification protein TERM 151 211079 - 211095 + F 70 -12.3 -2.92472 | overlap 211074 211071 211071 CGAATTCGGCCAGAC GCAGACC GTC GGTCTGC TCTGATCCTTTCTTT TERM 152 212137 - 212122 - g 72 -11.8 -3.53012 | CGGCCTGGGTGGAAA GCGCCG AGTC CGGCGC GGCGCTGATCGGCGT Pmen_0209 211137 - 212324 + | flagellar basal body FlaE domain-containing protein Pmen_0210 212334 - 213065 + | flagellar basal-body rod protein FlgF TERM 153 213243 - 213185 - f 86 -17.8 -2.85668 | gap 3, opp_overlap 213190 213191 213206, overlap 213150 213146 213183 213188 213206 213216 CAGGGTGACAGGACA CGACGCGTAGCCCGGATGCAATCCGGGAA CATT TCCCCGGATTGCATCCGGGCTACA-G--A CAAACGAGGTAATGC TERM 154 213242 - 213188 - f 100 -31.1 -2.68434 | gap 1, opp_overlap 213190 213191 213206, overlap 213146 213183 213185 213206 213216 GGTGACAGGACACGA CGCGTAGCCCGGATGCAATCCGGGAA CATT TCCCCGGATTGCATCCGGGCTACA-G ACAAACGAGGTAATG Pmen_0211 213261 - 214046 + | flagellar basal-body rod protein FlgG flgH 214052 - 214714 + | flagellar basal body L-ring protein flgI 214724 - 215818 + | flagellar basal body P-ring protein TERM 155 215902 - 215854 - g 80 -14.6 -3.37493 | gap 2, overlap 215856 CGCCCAACACATGAA CAGCCAC-CGC-GGCGCCGCCGAT GGC ATCGGCAACGCCCGCGAGCAGCAG CTGCAGGCCGCCGCC TERM 156 215900 - 215856 - g 80 -15.8 -3.25475 | gap 2, overlap 215854 CCCAACACATGAACA GCCAC-CGC-GGCGCCGCCGAT GGC ATCGGCAACGCCCGCGAGCAGC AGCTGCAGGCCGCCG Pmen_0214 215822 - 216946 + | lytic transglycosylase, catalytic Pmen_0215 216950 - 218317 + | flagellar hook-associated protein FlgK TERM 157 218307 - 218322 + F 70 -10.4 -3.54459 | TCGACGACATGCTTG CCGCGT TCTG ACGCGG TTTCAGAGAGATTCA flgL 218341 - 219258 + | flagellar hook-associated protein FlgL TERM 158 219892 - 219864 - g 70 -11.8 -3.36492 | gap 2, overlap 219865 CGCCGAAGTGGATAA CGGCGGTGCGCTGA AAT TCAGCGC-CCGC-G AAAGCGACTGGCAGC Pmen_0217 219271 - 220296 + | hypothetical protein TERM 159 220305 - 220340 + T 100 -14 -5.36441 | GTCCTGAAGCTTGCC GGCCGTCAGCCGCG TCCACTCC TGCGGCTGGCGGTC TTTTTTATGTCCGGG Pmen_0218 221370 - 220390 - | TRAP dicarboxylate transporter, DctP subunit TERM 160 221411 - 221394 - R 70 -4.1 -4.65895 | gap 1 CTTTTTACGGAAAAA CGCATAGC GAG GCC-TGCG CCGAAACTGGCGGGC TERM 161 221519 - 221566 + r 77 -11.2 -3.61398 | opp_overlap 221543 TCGATGCCCGGTTAT TGTTGGCATGCTGTCGCTGACC AATC GGTCAGCGACAGAGAGCGCGCA TTCTTGCGGAAGGAA Pmen_0219 222754 - 221603 - | hypothetical protein Pmen_0220 224366 - 222897 - | poly-gamma-glutamate biosynthesis protein TERM 162 223929 - 223908 - G 72 -12.9 -3.18264 | overlap 223909 GGCGGTATTGATGAA GGCCGGCGC GCGC GCGGCGGCC AGGCTGTCGCCGGTG TERM 163 223964 - 223909 - G 71 -14.5 -2.50816 | gap 2, overlap 223908 GCGGTATTGATGAAG GCCGGC-GCGCGCGCGGCGGC-CAGGC TGTC GCCGGTGCCGGCGTGGGCGATGCCGGC GGCATCGAGCAGCGC Pmen_0221 225679 - 224384 - | major facilitator transporter TERM 164 225563 - 225518 - G 73 -9.5 -4.02163 | ATAGAGGAAGAAGAA CGCGCTGCCGATGAAGCCGAA CTGC TCCGGCGACAGCTGCAGCTCG TCGATGATCTGCGGG Pmen_0222 226730 - 225807 - | LysR family transcriptional regulator TERM 165 226793 - 226781 - R 90 -4.7 -5.38497 | overlap 226782 226783 ATTTAAAGCAAAAAA CGCCC CAT GGGGG AACTCGCGCGGCGAG TERM 166 226837 - 226818 - R 100 -10.6 -5.31275 | overlap 226819 GGCGAGGATAAAAAA GCGGCGGC CGAA GCCGCCGT GAGGTTAGCGCGATG TERM 167 226836 - 226819 - R 91 -14.1 -3.78042 | overlap 226818 GCGAGGATAAAAAAG CGGCGGC CGAA GCCGCCG TGAGGTTAGCGCGAT Pmen_0223 228227 - 226866 - | hypothetical protein Pmen_0224 230059 - 228248 - | hypothetical protein TERM 168 230249 - 230267 + H 76 -13.1 -3.31144 | opp_overlap 230233 CCCCCTGGCAGGGAC CCGGCGG CATAA CCGCCGG TTATCCCGATAGGCA Pmen_0225 230370 - 231347 + | diguanylate cyclase with PAS/PAC sensor Pmen_0226 231453 - 232058 + | glutathione S-transferase domain-containing protein TERM 169 232252 - 232233 - f 90 -15 -3.53224 | opp_overlap 232231 232229 232228 CAGGCGGTTGCGAAA CCTCGGCG GCCG CGCCGAGG GCTCATTGATCGTCC Pmen_0227 232306 - 233889 + | aldehyde dehydrogenase TERM 170 233911 - 233934 + T 100 -16 -4.8622 | opp_overlap 233911 CGCTGCAACGAAAAA TGCCGCGCCC GTTA GGGTGCGGCA TTTTTCATTCAGGCG TERM 171 233934 - 233911 - T 100 -13.8 -4.8622 | opp_overlap 233911 CGCTGCAACGAAAAA TGCCGCGCCC GTTA GGGTGCGGCA TTTTTCATTCAGGCG Pmen_0228 234732 - 233959 - | hypothetical protein Pmen_0229 234834 - 236258 + | putative metal dependent phosphohydrolase Pmen_0230 236346 - 236660 + | hypothetical protein TERM 172 237314 - 237297 - f 100 -9.8 -5.00138 | opp_overlap 237297 CATGGAAACGAAAAA GCCCGC ACAGTG GCGGGC TTCTAAAATGGCGCA gabD 237746 - 239197 + | succinate-semialdehyde dehydrogenase I TERM 173 239748 - 239690 - g 71 -12.4 -3.30159 | overlap 239701 CGAAGCCGTCGAGAA CGCCG-TGAAGATCGCCCGCGCCGCCAC TGGCC GCGCCGGCGTGATCG-CCTTCACCGGCG CCTACCACGGCCGCA TERM 174 239731 - 239701 - g 72 -13.8 -3.03338 | overlap 239690 AGAACGCCGTGAAGA TCGCCCGCGCCGCC ACT GGCCGCGCCGGCGT GATCGCCTTCACCGG TERM 175 240593 - 240576 - g 75 -4.7 -4.66833 | GCGCAACTGGAAAAA GGCATCG CCAT CGTCGCC GAGTGCTTCGACGAG Pmen_0232 239295 - 240617 + | 4-aminobutyrate aminotransferase TERM 176 240622 - 240656 + F 76 -12.8 -3.40403 | overlap 240624 240626 AGCTGGCCTGAGCCC GATAGCGGGCACGCCG CCC TGGCGTGTCCGCTCTG TTCTCCTGCACGGCC TERM 177 240624 - 240654 + F 89 -15.4 -3.27475 | overlap 240622 240626 CTGGCCTGAGCCCGA TAGCGGGCACGCCG CCC TGGCGTGTCCGCTC TGTTCTCCTGCACGG TERM 178 240626 - 240652 + F 90 -18 -3.20322 | overlap 240624 240622 GGCCTGAGCCCGATA GCGGGCACGCCG CCC TGGCGTGTCCGC TCTGTTCTCCTGCAC TERM 179 240665 - 240692 + F 75 -14.2 -2.96274 | overlap 240661 240667 CGCTCTGTTCTCCTG CACGGCCAGCTA CGCG TAGCTGGCCATG TCTCGTTCTGCAGCC Pmen_0233 240881 - 242566 + | hypothetical protein Pmen_0234 242659 - 243186 + | TetR family transcriptional regulator Pmen_0235 243183 - 244319 + | major facilitator transporter TERM 180 244362 - 244344 - T 100 -13.1 -4.87665 | GCGCACGCAGAAAAA GGCCCGC GCGAG GCGGGCC AAAGGGTGACAAGCA Pmen_0236 244753 - 244394 - | protein of unknown function DUF861, cupin_3 Pmen_0237 245006 - 246499 + | aldehyde dehydrogenase (acceptor) TERM 181 246573 - 246602 + F 100 -17.9 -4.87803 | overlap 246569 CATGAGTCACACCTG CGGCCGGGTTTCC TTGG GGAAGTCCGGCCG TTTTGTTTGGCGATG Pmen_0238 246805 - 247953 + | major facilitator transporter TERM 182 247939 - 247987 + F 100 -8.8 -4.84359 | gap 2, overlap 247942 GGCTCCGATCTGGCG CAGGCC-G-AGCGCTGAAGCGCGC CTG GCGCGCTCTGGCGTTGCCGGCTAG TTTTTCTGAACGTCA TERM 183 247942 - 247984 + F 72 -11.3 -3.31915 | gap 2, overlap 247939 TCCGATCTGGCGCAG GCC-G-AGCGCTGAAGCGCGC CTG GCGCGCTCTGGCGTTGCCGGC TAGTTTTTCTGAACG Pmen_0239 248041 - 248994 + | OmpA/MotB domain-containing protein Pmen_0240 250416 - 248995 - | GntR family transcriptional regulator Pmen_0241 250578 - 250796 + | hypothetical protein Pmen_0242 252116 - 250803 - | FAD dependent oxidoreductase TERM 184 252223 - 252204 - H 83 -4.8 -5.0538 | overlap 252205 252206 GTGGAGGGGAAAAAA GCGCTCTC AGCA GGGTGCGC TGCGAGAGGTAGACA Pmen_0243 252353 - 252706 + | hypothetical protein TERM 185 252702 - 252760 + T 85 -18.3 -2.61264 | gap 2, overlap 252697 252703 CGCGGCAGCGGCTGG TGTAGGGTGTGCCGCACGCACC-A-GCTT TCC GAGCATTGGTGCGCACGGCGCACCCTACG CTTCTCAATCCGGCA Pmen_0244 253253 - 252765 - | AsnC family transcriptional regulator Pmen_0245 253411 - 254709 + | D-amino acid dehydrogenase small subunit Pmen_0246 254747 - 255097 + | endoribonuclease L-PSP TERM 186 255159 - 255180 + F 100 -8.6 -5.47821 | overlap 255160 TTTGTGTTGGCTTTT CGCCCGGC TGTCCC GCCGGGCA TTTTTTTGACTGGCT TERM 187 255160 - 255179 + F 86 -12.1 -3.87608 | overlap 255159 TTGTGTTGGCTTTTC GCCCGGC TGTCCC GCCGGGC ATTTTTTTGACTGGC dadX 255241 - 256329 + | alanine racemase Pmen_0248 256433 - 256981 + | XRE family transcriptional regulator Pmen_0249 257104 - 257514 + | cytochrome c5-like protein TERM 188 257529 - 257559 + F 90 -14.8 -3.56092 | opp_overlap 257537, overlap 257537 AGAGCCGACGCTTCG CTGAAAAACCGCCC TCT GGGCGGTTTTTTCG TTTAGAGCCTGCTCA TERM 189 257551 - 257537 - f 100 -12.8 -4.56597 | opp_overlap 257529 257537 CGCTTCGCTGAAAAA CCGCCC TCT GGGCGG TTTTTTCGTTTAGAG TERM 190 257537 - 257551 + F 100 -12.8 -5.37593 | opp_overlap 257537, overlap 257529 CGCTTCGCTGAAAAA CCGCCC TCT GGGCGG TTTTTTCGTTTAGAG TERM 191 257782 - 257801 + F 95 -11.4 -4.57569 | CAAGCGGCTTCCGAC CGGGCTGG CGCT CCAGCCTG TTTTTAACGCAGTAG Pmen_0250 257927 - 260062 + | Acetyl-CoA hydrolase-like protein Pmen_0251 260695 - 260123 - | xanthine phosphoribosyltransferase Pmen_0252 261312 - 260830 - | hypothetical protein TERM 192 261440 - 261459 + r 76 -9.2 -4.07568 | overlap 261441 CTCCGCTCAGGCGTA GGGTGGGC TTCA GCCCACCG TTTTAGCCCGCCAGA TERM 193 261441 - 261458 + r 72 -12.7 -3.04398 | overlap 261440 TCCGCTCAGGCGTAG GGTGGGC TTCA GCCCACC GTTTTAGCCCGCCAG Pmen_0253 263500 - 261491 - | ATP-dependent DNA helicase Rep TERM 194 263203 - 263187 - G 77 -10.1 -3.9777 | TCGAAGATCGAGAAA CCGGGCT TGT AGCCCAG GCGCGCGTACTCCTT Pmen_0254 263771 - 265444 + | diguanylate cyclase/phosphodiesterase Pmen_0255 266864 - 265479 - | multidrug efflux protein NorA TERM 195 266982 - 266966 - H 91 -5.1 -5.50313 | CACAAAAGGAAAAAA GCCATGC GAG ACATGAC TGAAACTCATGGATG Pmen_0256 266995 - 267921 + | LysR family transcriptional regulator Pmen_0257 269511 - 268018 - | Mg chelatase, subunit ChlI Pmen_0258 269893 - 269546 - | hypothetical protein Pmen_0259 270217 - 270555 + | nitrogen regulatory protein P-II TERM 196 270613 - 270625 + F 84 -9.1 -4.47328 | opp_overlap 270593 270589 CTGCGAACTTTCGCA GGGCT AGG AGCCC TTTTGTCCTCGAATT Pmen_0260 270885 - 272135 + | ammonium transporter TERM 197 272151 - 272176 + F 100 -19.1 -5.24129 | opp_overlap 272151 272155 CACGCCGGTAAATCA CAAAGGGCGCC TTCG GGCGCCCTTTG TTTTTTCTGGCGCCG TERM 198 272176 - 272151 - f 88 -19.1 -2.90813 | opp_overlap 272151, overlap 272155 CACGCCGGTAAATCA CAAAGGGCGCC TTCG GGCGCCCTTTG TTTTTTCTGGCGCCG TERM 199 272172 - 272155 - f 95 -14.1 -4.13654 | opp_overlap 272151, overlap 272151 CCGGTAAATCACAAA GGGCGCC TTCG GGCGCCC TTTGTTTTTTCTGGC Pmen_0261 272234 - 272659 + | hypothetical protein Pmen_0262 272737 - 273060 + | hypothetical protein TERM 200 273075 - 273040 - T 71 -9.7 -3.8377 | gap 1, opp_overlap 273072 273074, overlap 273042 AAGCCCGACAGCAAA TACGGCA-GCCGCCCC ATCTG AGGACGGCACGCCGCA AGAAACCCGCCCCTG TERM 201 273073 - 273042 - T 70 -10.1 -3.5032 | gap 1, opp_overlap 273072, overlap 273040 GCCCGACAGCAAATA CGGCA-GCCGCCCC ATCTG AGGACGGCACGCCG CAAGAAACCCGCCCC TERM 202 273072 - 273106 + T 87 -17.3 -3.09516 | opp_overlap 273042 273040 273081, overlap 273074 273081 CTGAGGACGGCACGC CGCAAGAAACCCGCC CCTGT GGCGGGTTTTTTGTG TTCAGTGGTGCGGGG TERM 203 273074 - 273104 + T 83 -16.3 -3.10796 | opp_overlap 273040 273081, overlap 273072 273081 GAGGACGGCACGCCG CAAGAAACCCGCC CCTGT GGCGGGTTTTTTG TGTTCAGTGGTGCGG TERM 204 273081 - 273097 + T 100 -10.8 -5.48063 | opp_overlap 273081, overlap 273074 273072 GCACGCCGCAAGAAA CCCGCC CCTGT GGCGGG TTTTTTGTGTTCAGT TERM 205 273097 - 273081 - T 84 -10.8 -4.16016 | opp_overlap 273081 273074 273072 GCACGCCGCAAGAAA CCCGCC CCTGT GGCGGG TTTTTTGTGTTCAGT Pmen_0263 273886 - 273185 - | HAD family hydrolase xerC 274830 - 273883 - | site-specific tyrosine recombinase XerC TERM 206 274227 - 274261 + g 80 -14.3 -3.68222 | gap 1 ACTGCTCCAGGGCCT GGCGCGCCATGCTGCC GACC GGCAGC-TCGCGCGTC TTGTTGCCCTTGCCG Pmen_0265 275543 - 274845 - | hypothetical protein dapF 276370 - 275540 - | diaminopimelate epimerase Pmen_0267 277628 - 276381 - | diaminopimelate decarboxylase TERM 207 277287 - 277309 + g 72 -8.3 -4.07568 | opp_overlap 277269 CACGCCCACTTCGAG GGCGCGGCG CATGT CGTCGCGGC TTTTGCCGACGCCGG Pmen_0268 277945 - 278982 + | AraC family transcriptional regulator cyaY 279052 - 279384 + | frataxin-like protein Pmen_0270 279374 - 279571 + | hypothetical protein TERM 208 279570 - 279581 + F 71 -5.8 -4.38748 | overlap 279573 GCCGGTCGACCCCCT GACC AAGC GGTC TTGTTTATTTGTCCG TERM 209 279573 - 279584 + F 70 -4.4 -4.55697 | overlap 279570 GGTCGACCCCCTGAC CAAG CGGT CTTG TTTATTTGTCCGGCT TERM 210 279629 - 279646 + F 100 -14.1 -5.55855 | CAACATTCAGCTGAA CCCCGCC TTCG GGCGGGG TTTTGTTTTTTTGAG Pmen_0271 279689 - 280096 + | nucleoside diphosphate kinase regulator Pmen_0272 280155 - 280955 + | lipase, class 3 cyaA 283828 - 280970 - | adenylate cyclase TERM 211 282722 - 282776 + g 77 -9.9 -3.97139 | gap 2, overlap 282747 GGCGGTCAGGCGCTC GAGCAGCAGGCGCTGCCAGCTCTTGGC GCG GCCGCGAGTCGGC-G-GCCGGCTGATC TTCTTGTTCACCTTC Pmen_0274 284203 - 283949 - | hypothetical protein Pmen_0275 284607 - 284278 - | hypothetical protein Pmen_0276 285046 - 284588 - | hypothetical protein TERM 212 284935 - 284983 + g 72 -14 -3.05384 | gap 1 TGTGGTCCGGCTCGG GGTGG-TAGTGGCGGGTGTAGAC GCTG GTCTGCACCTGCCAGTAGTCGCC TTCGCTGGCGAGGGC TERM 213 285146 - 285116 - R 70 -10.4 -3.48395 | gap 1, opp_overlap 285115 AGCGCGCGGAGAGAA GTTCGCGGCCGCG TGCCAC CGCGGC-GCGTAC CTGGTTCGGTGCGGT Pmen_0277 286493 - 285099 - | argininosuccinate lyase TERM 214 285531 - 285545 + g 75 -11.4 -3.73775 | GTTGTCCTTGTTGTA GGCCAG CGG CTGGCC TTTCATCAGGGTCAG TERM 215 287244 - 287194 - g 72 -13.3 -3.18264 | gap 2, opp_overlap 287225, overlap 287196 TGGCGCAGGCAGGAA CAGGCCGAATTGCGCGCGCGCATCG AAT CGCTGCAGGCGCGCA-TCCG-CCCG CATTTCCTGTTCAAC TERM 216 287243 - 287196 - g 76 -14.8 -3.1552 | gap 1, opp_overlap 287225, overlap 287194 GCGCAGGCAGGAACA GGCCGAATTGCGCGCGCGCATCG AAT CGCTGCAGGCGCGCA-TCCGCCC GCATTTCCTGTTCAA Pmen_0278 286726 - 287808 + | sensory transduction protein kinase AlgZ Pmen_0279 287805 - 288551 + | two-component response regulator AlgR hemC 288636 - 289574 + | porphobilinogen deaminase Pmen_0281 289571 - 290344 + | uroporphyrinogen-III synthase TERM 217 290412 - 290396 - g 86 -5 -5.19328 | overlap 290397 ACGCCAGAAGAAAAA CCGGCC AGCGA GGCCGT GAACACCACCCCGAC Pmen_0282 290357 - 291487 + | protein of unknown function DUF513, hemX Pmen_0283 291484 - 292731 + | HemY domain-containing protein TERM 218 292813 - 292839 + F 76 -10.1 -3.84712 | gap 1, overlap 292814 292816 AGCCATTGACCCAGC CCG-GGGCGCCT TGAA AGGCGCCCTCGC TTTCCTCTACCGTTA TERM 219 292814 - 292838 + F 75 -13.6 -2.90345 | gap 1, overlap 292813 292816 GCCATTGACCCAGCC CG-GGGCGCCT TGAA AGGCGCCCTCG CTTTCCTCTACCGTT TERM 220 292816 - 292835 + F 77 -15 -2.69601 | overlap 292814 292813 CATTGACCCAGCCCG GGGCGCCT TGAA AGGCGCCC TCGCTTTCCTCTACC Pmen_0284 292884 - 293375 + | disulphide bond formation protein DsbB TERM 221 293646 - 293630 - f 78 -4.4 -4.85599 | gap 1 TGCAGGCCATAAAAA CGTCTCG GGAG CG-GACG TACGACAGGCATTAG Pmen_0285 293685 - 294158 + | anti-RNA polymerase sigma 70 factor Pmen_0286 294863 - 294216 - | peptidylprolyl isomerase, FKBP-type TERM 222 294323 - 294338 + g 72 -11.8 -3.59262 | opp_overlap 294320 294317 TCGATGGAATCACCA GGCGCC AGTG GGCGCC TTTCGGCATCTGCAG TERM 223 295178 - 295162 - g 74 -2.1 -4.82154 | overlap 295164 295170 AAGGCACAGGAAAAA CTGCACA AGG CGCGCGG CAAGTTGCAAGACGC Pmen_0287 295000 - 295953 + | putative CheA signal transduction histidine kinase TERM 224 295964 - 295995 + T 93 -17.2 -3.30124 | opp_overlap 295958, overlap 295966 CCTAAGCGAGGCGAA TGGCGCCGCGCAGC ACCT GCAGCGCGGCGCTG TTCTCGCCGGTCAGG TERM 225 295966 - 295993 + T 91 -19.8 -3.21924 | opp_overlap 295958, overlap 295964 TAAGCGAGGCGAATG GCGCCGCGCAGC ACCT GCAGCGCGGCGC TGTTCTCGCCGGTCA Pmen_0288 296393 - 295950 - | hypothetical protein Pmen_0289 296432 - 298342 + | ABC transporter related Pmen_0290 298342 - 298881 + | hypothetical protein TERM 226 299120 - 299169 + G 83 -15.6 -3.58343 | gap 1 CTGGCCCTGCAGATC GCCATCGTCGCGGCGGGCGTGGG CGCCA TCCTCGCC-GCCTCGGCGCTGGC TTTCAGCCTGATCAA Pmen_0291 298916 - 299590 + | lysine exporter protein LysE/YggA Pmen_0292 299719 - 301608 + | iron permease FTR1 Pmen_0293 301731 - 302066 + | hypothetical protein Pmen_0294 302128 - 302577 + | hypothetical protein TERM 227 302731 - 302704 - T 76 -14.2 -2.99471 | gap 1, opp_overlap 302703 302702 302694 TCAGCCGCACAGATA GGTGCCGGT-GCC GAC GGCCACCAGCACC CCTTCGTCGTTGTGC Pmen_0295 303156 - 302689 - | hypothetical protein Pmen_0296 304046 - 303387 - | isoprenoid biosynthesis protein TERM 228 304105 - 304069 - H 87 -10 -4.30576 | gap 1, opp_overlap 304066 304070 TCCTGATGAGGAAAA CGCCGCTCG-TTGCGCC TGTT GGTGCCGGCGAGCGGCG GGATGTTGCCAATTC Pmen_0297 304209 - 305501 + | sterol desaturase-like protein Pmen_0298 306023 - 305469 - | hypothetical protein TERM 229 306108 - 306135 + H 72 -14.2 -2.63102 | gap 1, opp_overlap 306102 306101, overlap 306132 TGCCACAATGCGCGA CTGCTGTGCGACC CGC GGTCGCAC-GCGG TCATGTGACCGTCAT Pmen_0299 306217 - 307230 + | delta-aminolevulinic acid dehydratase Pmen_0300 307250 - 309433 + | polyphosphate kinase TERM 230 309450 - 309437 - T 100 -9.5 -4.83169 | opp_overlap 309436 AGCGCTCGATAAAAA GGCCG CTTG CGGCC ATCTGATGGCCCTCT Pmen_0301 311105 - 309603 - | Ppx/GppA phosphatase TERM 231 310412 - 310443 + g 73 -14.4 -3.21099 | gap 1 CCTCGCCATTGCCCA GGCCGGCGGCCTTGG TCG CCA-GGCCGATGGCC TTGATGGTGCCGGAG Pmen_0302 311713 - 311192 - | ureidoglycolate hydrolase Pmen_0303 312441 - 311710 - | ABC transporter related Pmen_0304 313075 - 312428 - | polar amino acid ABC transporter, inner membrane subunit TERM 232 312644 - 312632 - G 80 -9.1 -4.18494 | CACCTGCACCGAAAA GCCCA CGG TGGGC GCCACGGCAATGCGC Pmen_0305 313740 - 313075 - | polar amino acid ABC transporter, inner membrane subunit Pmen_0306 314545 - 313760 - | extracellular solute-binding protein TERM 233 315318 - 315351 + G 72 -13.2 -3.14132 | opp_overlap 315315, overlap 315344 CAGCGGCAACCAGGC GATGTTCGCCCTGG TGACCT CCAGTGCGGACATC TTCCTGGAAAGCCAG Pmen_0307 314833 - 315537 + | GntR family transcriptional regulator Pmen_0308 315647 - 315973 + | thioredoxin TERM 234 315986 - 316018 + F 89 -12.8 -4.09685 | opp_overlap 315993 315994, overlap 315987 315994 TGAGTTTCGCCGCTC TGAAGAAGCCCCGC CTTGC GCGGGGTTTTTTCG TTTTCAGGGCTAGAC TERM 235 315987 - 316017 + F 76 -14.1 -3.05597 | opp_overlap 315993 315994, overlap 315986 315994 GAGTTTCGCCGCTCT GAAGAAGCCCCGC CTTGC GCGGGGTTTTTTC GTTTTCAGGGCTAGA TERM 236 315994 - 316010 + F 100 -10.8 -5.46698 | opp_overlap 315993 315994, overlap 315987 315986 GCCGCTCTGAAGAAG CCCCGC CTTGC GCGGGG TTTTTTCGTTTTCAG rho 316206 - 317465 + | transcription termination factor Rho TERM 237 317596 - 317625 + F 93 -15.7 -3.54638 | overlap 317599 317602 GATCCGATTGCACTG CCACGAGGCCGGG GAAA CCCGGCCTTGTCG TTTCCGCAGGCTTCT TERM 238 317599 - 317622 + F 81 -16 -2.90615 | overlap 317596 317602 CCGATTGCACTGCCA CGAGGCCGGG GAAA CCCGGCCTTG TCGTTTCCGCAGGCT TERM 239 317602 - 317619 + F 88 -14.1 -3.60151 | overlap 317599 317596 ATTGCACTGCCACGA GGCCGGG GAAA CCCGGCC TTGTCGTTTCCGCAG Pmen_0310 317715 - 319181 + | 3-octaprenyl-4hydroxybenzoate decarboxylase Pmen_0311 319181 - 320149 + | CDP-6-deoxy-delta-3,4-glucoseen reductase Pmen_0312 320439 - 320597 + | hypothetical protein TERM 240 320658 - 320695 + T 76 -5.4 -4.60487 | gap 1, overlap 320654 320651 320659 TCGCTGAGGGCCGGC TCGGGCCGACAGCTGCG CCGTT CGCTCCAGTCG-CCCGG TTTTTGCAGATGGTC Pmen_0313 321764 - 320784 - | alcohol dehydrogenase Pmen_0314 321914 - 322318 + | flagellar basal body-associated protein FliL-like protein Pmen_0315 323506 - 322382 - | ABC-2 type transporter Pmen_0316 326211 - 323506 - | ABC transporter related TERM 241 325374 - 325324 - G 89 -17.6 -3.41587 | overlap 325319 GCCGAGAAAACCGAA GATCTCGCCGCGGCGGATGCGG AACGACA CCGCGTCCACCGCGATGAAATC GCCGAAGCGCATGGT Pmen_0317 327272 - 326208 - | secretion protein HlyD family protein TERM 242 327103 - 327076 - G 70 -9.8 -3.72576 | opp_overlap 327061 CCTGGCTCGACGAAA TCGCCCTCATCG ACCT CGATGCTGGCGA TGCGCCCGGCCAGCT Pmen_0318 329204 - 327366 - | diguanylate cyclase with PAS/PAC sensor TERM 243 327804 - 327846 + g 71 -12.7 -3.28924 | gap 1, opp_overlap 327841, overlap 327805 GCCGCTGCGCCGCAG GCGGCGC-AGTTCGGCCGGC AACT GCTGGTCGAAATAGCGCCGG TTGTACAGGCCGGTC TERM 244 327805 - 327845 + g 77 -16.2 -2.57211 | gap 1, opp_overlap 327841, overlap 327804 CCGCTGCGCCGCAGG CGGCGC-AGTTCGGCCGGC AACT GCTGGTCGAAATAGCGCCG GTTGTACAGGCCGGT TERM 245 329185 - 329163 - G 84 -14.1 -4.00038 | CACCAGCAGGAGAAA GGCCAGCGC CAGGC GCGCCGGCC AGGCGGAAGAGGCCG Pmen_0319 329705 - 329256 - | hypothetical protein TERM 246 329871 - 329855 - H 80 -10.8 -4.07466 | opp_overlap 329855 ATTACACAACAATAA CGCGCG ACCCA CGCGCG CAGTTGCCTTGAAGG Pmen_0320 329899 - 330030 + | hypothetical protein Pmen_0321 330679 - 330083 - | 5-formyltetrahydrofolate cyclo-ligase TERM 247 330187 - 330200 + g 70 -2.3 -4.61231 | CCAGACCCAATAACG TCGGC ATGT GCCAA TTTTTGCGCCTGTGC TERM 248 330537 - 330555 + g 72 -11.6 -3.53811 | opp_overlap 330523 330549 AGCGCGATGTGCCTG GCGCGGCG AAA CGCCGGGC TTTGCGCCAGCTGAC Pmen_0322 331285 - 330980 - | cell division protein ZapA Pmen_0323 331491 - 331282 - | hypothetical protein TERM 249 331998 - 331959 - g 87 -14.9 -3.78775 | opp_overlap 331955 331954 331951 TGCCGGACGATGAAA CGCCGCTGGCGCAGCGC GCCGTT GCGCTGGGCCAGTGGTG CCAGGGTTTTCTCGG Pmen_0324 331682 - 332236 + | hypothetical protein Pmen_0325 332255 - 333589 + | peptidase M24 TERM 250 333693 - 333667 - g 85 -15.8 -3.72576 | TGGCCCTGCAGGAAA CGGCGCGCCAGC GTG GCTGGCGCATCG CCCTGATCGAGCCCT Pmen_0326 333594 - 334778 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 251 334792 - 334838 + F 74 -11.4 -3.56092 | overlap 334795 GAGGCGCTGCATGAC CTGCCGTGCGCCGGTCTTGCCG GGC CGAAAAGGCAGGCGCACCGTGG TTTCGAGAATGGTGC TERM 252 334865 - 334849 - f 72 -13.7 -2.57132 | opp_overlap 334846, overlap 334848 CGTGGTTTCGAGAAT GGTGCGC ACG GCGCACC CTATGGATTGAGAAA Pmen_0327 334881 - 336104 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Pmen_0328 336144 - 336440 + | hypothetical protein TERM 253 337654 - 337683 + F 84 -11.4 -4.11216 | gap 1, overlap 337656 GCGCTGCCGTTATAC TG-CGACGCCCCG CTAGC CGGGGCGTCGTCC TTTTCGCCGTCGAGG TERM 254 337656 - 337680 + F 89 -18.6 -3.09004 | overlap 337654 GCTGCCGTTATACTG CGACGCCCCG CTAGC CGGGGCGTCG TCCTTTTCGCCGTCG Pmen_0330 337706 - 339322 + | binding-protein-dependent transport systems inner membrane component gcvT 339634 - 340731 + | glycine cleavage system aminomethyltransferase T Pmen_0332 340826 - 341215 + | glycine cleavage system protein H TERM 255 341230 - 341257 + F 72 -12.8 -3.08966 | opp_overlap 341237, overlap 341237 ATTCGCATCGATCTG CAAGGAACCCGC TTCG GCGGGTTTTTTG TTGCCTGGGGTTTCG TERM 256 341237 - 341250 + F 100 -9.5 -5.4833 | opp_overlap 341237, overlap 341230 TCGATCTGCAAGGAA CCCGC TTCG GCGGG TTTTTTGTTGCCTGG TERM 257 341344 - 341319 - f 71 -7.1 -4.19817 | opp_overlap 341319 341321, overlap 341334 GTCATTTAGCCAAAA TACAATATATA AAAA TACATATTGTA TTGAGTGAAGGTGTT TERM 258 341344 - 341334 - f 80 -4 -5.12474 | opp_overlap 341321 341319, overlap 341319 TACAATATATAAAAA TACA TAT TGTA TTGAGTGAAGGTGTT Pmen_0333 341362 - 341676 + | ArsR family transcriptional regulator Pmen_0334 341673 - 342107 + | protein of unknown function DUF395, YeeE/YedE Pmen_0335 342110 - 342529 + | protein of unknown function DUF395, YeeE/YedE Pmen_0336 342544 - 342732 + | hypothetical protein TERM 259 342764 - 342783 + T 100 -16.4 -4.32034 | opp_overlap 342764 CAGCTGAACGAAAAA CGCCCGGC ATCT GCCGGGCG TTTTCATGCTGCTGC TERM 260 342783 - 342764 - T 100 -16.4 -4.87291 | opp_overlap 342764 CAGCTGAACGAAAAA CGCCCGGC ATCT GCCGGGCG TTTTCATGCTGCTGC Pmen_0337 343917 - 342811 - | agmatine deiminase Pmen_0338 344871 - 343987 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pmen_0339 345776 - 345135 - | TetR family transcriptional regulator Pmen_0340 346906 - 345848 - | extracellular solute-binding protein TERM 261 346958 - 346939 - R 70 -10.6 -3.54109 | opp_overlap 346937 346946 TGAAGGCAACGATAA CCGGCGGC CTCG GTCGCCGG AGGTTGGTTCACGTC TERM 262 347075 - 347052 - R 81 -8.1 -4.65895 | opp_overlap 347055, overlap 347055 GTTGGCAGGCAAAAA GAAGCCGGC TCTGCG GCCGGCTTT CTCGGTGTCACACGG TERM 263 347072 - 347055 - R 89 -9.8 -4.44608 | opp_overlap 347055, overlap 347052 GGCAGGCAAAAAGAA GCCGGC TCTGCG GCCGGC TTTCTCGGTGTCACA TERM 264 347055 - 347072 + r 78 -10.5 -3.95073 | opp_overlap 347055 347052 GGCAGGCAAAAAGAA GCCGGCT CTGC GGCCGGC TTTCTCGGTGTCACA Pmen_0341 348462 - 347083 - | L-glutamine synthetase TERM 265 348290 - 348303 + g 77 -3.8 -4.73388 | GCGAAGAGCGAAGCC GGCA GGTTGA TGCC TTTTTCGTACACCTT TERM 266 348707 - 348685 - H 85 -2.6 -5.41143 | TATTGTGTAAAAAAA TGAACAAGGC TAA GCTCGGTTCA AACCCATAACAGCAA TERM 267 349027 - 349050 + H 78 -2.2 -5.09895 | overlap 349036 TCGAGGCATCGACGC CATCGACTGG CGCC CCGGGCGGAG TTTTTTCCGTGCCTG Pmen_0342 349220 - 350578 + | L-glutamine synthetase TERM 268 350577 - 350617 + F 86 -12.5 -3.85698 | overlap 350578 TGCTGTTGTCGGTGT AACG-GGCGGCCGGCCGCG CCAGT CGCGGCCGG-CGCCACGAA TTTCTGCGAGGCGCC TERM 269 350578 - 350616 + F 81 -16 -2.91276 | overlap 350577 GCTGTTGTCGGTGTA ACG-GGCGGCCGGCCGCG CCAGT CGCGGCCGG-CGCCACGA ATTTCTGCGAGGCGC TERM 270 350793 - 350764 - g 70 -4.1 -4.57073 | overlap 350751 350748 350765 350766 350785 CAGCTGGCCGAAAAA GGCCCGCGCATCA TCAC TGAAGCGAAGGGC GTTCACCTGTGGGAC Pmen_0343 350662 - 352035 + | putative aminotransferase Pmen_0344 352167 - 353264 + | extracellular solute-binding protein TERM 271 353281 - 353304 + F 100 -19.6 -3.53012 | opp_overlap 353270 353269 353277 353278 CAACGCAGCAACGCC GCCTGGCGGG TTCG CCCGCCAGGC TTTCCCCAGGCAAGA Pmen_0345 353332 - 354426 + | extracellular solute-binding protein TERM 272 354473 - 354450 - f 78 -10.3 -3.86524 | gap 1 AGATTTTCCTATAAA GTGCCGCGCC TTTTC GG-GCGGCAC ACCATAACGAGGATG Pmen_0346 354494 - 355585 + | extracellular solute-binding protein TERM 273 355589 - 355617 + F 80 -14.6 -3.03903 | opp_overlap 355586 TCGGGTCAGTAATCG TTCTGCCCGGCC GCAGG GGCCGGGCACAA TCTTCCGGGAGTTTT Pmen_0347 355639 - 356793 + | spermidine/putrescine ABC transporter ATPase subunit Pmen_0348 356790 - 357698 + | binding-protein-dependent transport systems inner membrane component Pmen_0349 357695 - 358582 + | ornithine carbamoyltransferase TERM 274 358626 - 358597 - T 93 -16.5 -3.53091 | opp_overlap 358603 358610, overlap 358603 AGCTTCTGGCTGAAA GCAAAACGGGCCC CGCG GGGCCCGTTTTTC ATGCTGTAGGGTGCG TERM 275 358620 - 358603 - T 100 -14.1 -4.54727 | opp_overlap 358603 358610, overlap 358597 TGGCTGAAAGCAAAA CGGGCCC CGCG GGGCCCG TTTTTCATGCTGTAG TERM 276 358603 - 358620 + T 100 -14.1 -4.79223 | opp_overlap 358603 358597, overlap 358610 TGGCTGAAAGCAAAA CGGGCCC CGCG GGGCCCG TTTTTCATGCTGTAG Pmen_0350 360027 - 358663 - | adenylate cyclase TERM 277 360352 - 360338 - g 70 -2.1 -4.68705 | gap 1, overlap 360339 360340 ACAAGCTGAAGAAAA GCGTGC GCCT GCAC-C TGCCCAAGAGCCTGT Pmen_0351 360139 - 360816 + | hypothetical protein Pmen_0352 360855 - 362126 + | phosphate transporter Pmen_0353 362194 - 363360 + | acetylornithine deacetylase TERM 278 364001 - 364046 + G 75 -15.3 -2.78384 | CCACCCGCGCCGCCA TCGACCTGGGCGCCGACAAGC TGCT GCTGTTCGGCGCCGAGGACGG TCTGCTCGACGAGCA Pmen_0354 363424 - 364722 + | N-acetylglutamate synthase TERM 279 364775 - 364756 - T 75 -7.8 -4.21908 | CATCAGGACGGAAAA GCCCCG GCTTGCAT CGGGGC TACGGGCTCATCAGA Pmen_0355 365097 - 364870 - | hypothetical protein Pmen_0356 366845 - 365265 - | glutamate--cysteine ligase Pmen_0357 367335 - 366949 - | thioesterase superfamily protein Pmen_0358 369656 - 367332 - | RNA-binding S1 domain-containing protein ompR 369863 - 370600 + | osmolarity response regulator Pmen_0360 370677 - 371993 + | osmolarity sensor protein envZ Pmen_0361 372096 - 375860 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 280 375845 - 375900 + T 88 -13.8 -3.61398 | TCTCGCCTGGCTGCA GGCGCGCCAGGGCTGAGGCGGCCT ACCAGCTC AGGCTGCCGGGGCTCAGTCGCGCC TTCTTGCCGCAGGGC Pmen_0362 376763 - 375867 - | peptidase U61, LD-carboxypeptidase A TERM 281 376745 - 376799 + g 74 -8 -4.18506 | gap 4, overlap 376749 TCAGCGCCAGGCGGC CGTCGAACGCTCGGCT-CATCCGCGACC CTT GGT-GCGGGTCTGGCCG-G-GTTCGGCG TTCTTTTCCAGGTAC Pmen_0363 377665 - 376760 - | SSU ribosomal protein S6P modification protein TERM 282 377323 - 377313 - G 72 -8.2 -4.09685 | overlap 377314 GGGGAGTGGGCAAAA CCGG TCA CCGG CAGGCCGATGCCCTT Pmen_0364 378132 - 377662 - | hypothetical protein Pmen_0365 378165 - 378677 + | RNA-binding S4 domain-containing protein Pmen_0366 379550 - 378756 - | phosphoesterase, PA-phosphatase related TERM 283 379277 - 379248 - G 70 -8.5 -3.92373 | gap 1 CAGGGCAGTCAGAAA GGCGAACAGG-GCG CGG CGCACCTGATGGCC CTGGAACACCAGGTC hslO 379760 - 380647 + | Hsp33-like chaperonin Pmen_0368 380805 - 382346 + | phosphoenolpyruvate carboxykinase TERM 284 382363 - 382392 + F 100 -18.7 -4.14243 | opp_overlap 382370, overlap 382364 382370 CTGGCCTGTGGTCTC TGACAAAGCCGCC TTCG GGCGGCTTTGTCG TTTTCGGGTAGGGTG TERM 285 382364 - 382391 + F 95 -20 -3.08224 | opp_overlap 382370, overlap 382363 382370 TGGCCTGTGGTCTCT GACAAAGCCGCC TTCG GGCGGCTTTGTC GTTTTCGGGTAGGGT TERM 286 382370 - 382385 + F 89 -11.8 -4.208 | opp_overlap 382370, overlap 382364 382363 GTGGTCTCTGACAAA GCCGCC TTCG GGCGGC TTTGTCGTTTTCGGG TERM 287 382385 - 382370 - f 82 -11.8 -3.85698 | opp_overlap 382370 382364 382363 GTGGTCTCTGACAAA GCCGCC TTCG GGCGGC TTTGTCGTTTTCGGG TERM 288 382401 - 382423 + F 95 -12 -4.44046 | overlap 382404 TTTGTCGTTTTCGGG TAGGGTGCGC CGT GCGCACCTTG TTTATTTGCGGTGCG TERM 289 382404 - 382420 + F 100 -13.7 -4.33281 | overlap 382401 GTCGTTTTCGGGTAG GGTGCGC CGT GCGCACC TTGTTTATTTGCGGT TERM 290 383172 - 383142 - g 70 -13.2 -3.01712 | CTGGCGGTGCCAAGA CGCAGCGCCTGC AGCAATG GCTGGCGCCGCG GCGTGGTCAGGCGAG TERM 291 383762 - 383791 + G 78 -15.7 -3.14344 | GAGGACGAGGCCTTG CTGGCGCAGTTCG AGGG CGAGCGGCGCCAG TTCGTCGAGGCGATC Pmen_0369 382505 - 384433 + | ATP-dependent DNA helicase RecQ Pmen_0370 385092 - 384493 - | hypothetical protein Pmen_0371 386006 - 385089 - | hypothetical protein Pmen_0372 386792 - 386007 - | ABC transporter related TERM 292 386571 - 386534 - G 71 -14.9 -2.62396 | gap 1, opp_overlap 386562, overlap 386513 CACGCTGGTACAGCA CGCCGAAGCGCCGCTC CAGCTGC GAGCGGCGCT-CGGCC GACAGGCTCAGCAGC Pmen_0373 387928 - 386789 - | hypothetical protein Pmen_0374 388088 - 389575 + | flavoprotein involved in K+ transport-like protein Pmen_0375 389675 - 389887 + | hypothetical protein TERM 293 389900 - 389937 + F 91 -7.7 -4.8622 | overlap 389902 TGATCTCGCGTTCCC GACCGCTGCGCCG CCCATCCCGCCC TGGCGCAGCGGTG TTTTTGGTTACCGCA TERM 294 389902 - 389935 + F 80 -10.3 -4.05402 | overlap 389900 ATCTCGCGTTCCCGA CCGCTGCGCCG CCCATCCCGCCC TGGCGCAGCGG TGTTTTTGGTTACCG Pmen_0376 390127 - 391047 + | aldo/keto reductase Pmen_0377 391049 - 392341 + | ATP/ADP translocase-like protein Pmen_0378 393261 - 392365 - | LysR family transcriptional regulator Pmen_0379 393360 - 394601 + | 3-hydroxyacyl-CoA dehydrogenase Pmen_0380 394598 - 396388 + | acyl-CoA dehydrogenase domain-containing protein Pmen_0381 396527 - 397690 + | alcohol dehydrogenase Pmen_0382 397788 - 398219 + | thioesterase superfamily protein Pmen_0383 398283 - 399347 + | hypothetical protein TERM 295 399472 - 399421 - g 86 -17.2 -3.28712 | gap 1, opp_overlap 399431 CGGCGTCTGGTACAA CCGCAGCGGCGCGCTCGAGGCGCAG CTG CTGCTCAGCGAGCGCGA-GCTGCAG CGCGTCTACGGTGGC Pmen_0384 399344 - 400114 + | hypothetical protein Pmen_0385 400560 - 400108 - | 17 kDa surface antigen Pmen_0386 401780 - 400692 - | molybdate metabolism transcriptional regulator Pmen_0387 401979 - 402473 + | NADH dehydrogenase (ubiquinone), 24 kDa subunit Pmen_0388 402470 - 404041 + | NADH dehydrogenase (quinone) Pmen_0389 404057 - 406891 + | formate dehydrogenase, alpha subunit TERM 296 407227 - 407248 + G 72 -11.5 -3.53091 | AGGGCCTGAGCGAGT TCGCGCTGC AGGT GCTGCGCGA TTTGCGCGGGCAGAT Pmen_0390 407040 - 407288 + | formate dehydrogenase delta subunit TERM 297 408127 - 408108 - g 77 -12.8 -3.63968 | opp_overlap 408108, overlap 408101 CGCTAAACCGTGAAA GCCGCGAC GCCC GCCGCGGC TTTGCCGTGGTCACT TERM 298 408108 - 408127 + G 70 -10.6 -3.62275 | opp_overlap 408101 408108 CGCTAAACCGTGAAA GCCGCGAC GCCC GCCGCGGC TTTGCCGTGGTCACT Pmen_0391 407489 - 408313 + | formate dehydrogenase family accessory protein FdhD Pmen_0392 409032 - 408370 - | HAD family hydrolase TERM 299 409174 - 409154 - g 71 -3.1 -4.58395 | overlap 409155 409156 409158 CTCATGCGCCAAAAA CCCACGGTC CTC GCCCGCGAA ATCGTCGCCAGCAGC nudE 409142 - 409708 + | ADP-ribose diphosphatase NudE Pmen_0394 409705 - 410523 + | 3'(2'),5'-bisphosphate nucleotidase Pmen_0395 412483 - 410576 - | beta-ketoacyl synthase pyrC 414011 - 412740 - | dihydroorotase pyrB 415018 - 414011 - | aspartate carbamoyltransferase catalytic subunit Pmen_0398 415533 - 415030 - | pyrimidine regulatory protein PyrR TERM 300 415646 - 415598 - R 78 -4.7 -4.75174 | opp_overlap 415598 GAGGCAAGGCAAAAA CAGGCGAGGAA-GCGCAGTTTAC GAGTT GTAAA-TGAGCATTCCGAGCCTG TTTTTAACGCAGCAT TERM 301 415598 - 415646 + r 74 -5.4 -4.56775 | opp_overlap 415598 GAGGCAAGGCAAAAA CAGGCGAGGAA-GCGCAGTTTACG AGT TGTAAA-TGAGCATTCCGAGCCTG TTTTTAACGCAGCAT Pmen_0399 416114 - 415680 - | Holliday junction resolvase-like protein Pmen_0400 416719 - 416114 - | hypothetical protein Pmen_0401 417674 - 416778 - | TonB family protein TERM 302 417716 - 417757 + r 76 -13.7 -3.07575 | gap 1 CGCGCAGTCTGCCGG GTAGCGG-TGGGCGCCTGCA AGT TGCAGGCGCCAGGCTGCCAC TTGCGTCAAGCTTTT Pmen_0402 418719 - 417763 - | glutathione synthetase TERM 303 418882 - 418866 - H 73 -9.3 -3.86524 | AGAGTGTGCTACAAA GGCCCGG CGA CTGGGCC AAAGCCCATCGGCAA Pmen_0403 418961 - 419368 + | response regulator receiver protein Pmen_0404 419415 - 419780 + | response regulator receiver protein TERM 304 419826 - 419813 - f 72 -2.3 -4.74052 | opp_overlap 419813, overlap 419814 ACTAAATAAAAAGAA GGCCA AGGC TGGCA TGTCTGCGCAGACTC TERM 305 420294 - 420337 + G 79 -8 -4.45083 | TTCCAGCGAGAACAG CCCTGGTTGGTATTCAGCCC CTAC GCGCTGGCTGCCGATCCGGG TTTTCTCGATGTGGC Pmen_0405 419826 - 420359 + | putative CheW protein TERM 306 420374 - 420390 + F 75 -7.9 -4.19953 | AAGATTTATCGGTTG GGTCGGT TCT GCCGGCC TTTTGGCGTTACATG Pmen_0406 420444 - 422480 + | methyl-accepting chemotaxis sensory transducer TERM 307 422519 - 422485 - f 78 -10.7 -3.87373 | gap 1, overlap 422488 CAGACGCCTGATAAA GGAGT-GCGGAGGCTG GCTG CAGCCTCCGCTACACA GCCATGACCCAGGGC TERM 308 422516 - 422488 - f 83 -15.4 -3.01125 | gap 1, overlap 422485 ACGCCTGATAAAGGA GT-GCGGAGGCTG GCTG CAGCCTCCGCTAC ACAGCCATGACCCAG TERM 309 422647 - 422662 + G 73 -6 -4.36914 | CCGGTGTGGTGATCA GCGAGC AGCG GCGCGC TTTTCTGCAGACCAA Pmen_0407 422541 - 423401 + | protein-glutamate O-methyltransferase TERM 310 425146 - 425116 - g 76 -2.5 -4.8622 | gap 1 CCGCTCAAGGAAAAA CCCTCGATTC-TCG ACCG CGTCGAATCGCAGG AAGAGAGCCTGGCAC TERM 311 428086 - 428118 + G 75 -12 -3.73302 | gap 1, opp_overlap 428085 428083 TTTCTTTACGAAGAC CTCGGCGCTGGC-CG TCTG CGCGCCAGTCCCGAG TTGTTCGGTCTGTTG Pmen_0408 423412 - 430683 + | CheA signal transduction histidine kinase Pmen_0409 430680 - 431699 + | CheB methylesterase Pmen_0410 431710 - 432180 + | putative CheW protein TERM 312 432236 - 432217 - T 100 -16.4 -4.72272 | opp_overlap 432217 CTCGCCCATGAAAAA GCCCCGGC ATTG GCCGGGGC TTTTTCGTTACTGCG TERM 313 432217 - 432236 + T 100 -16.4 -4.90266 | opp_overlap 432217 CTCGCCCATGAAAAA GCCCCGGC ATTG GCCGGGGC TTTTTCGTTACTGCG Pmen_0411 433742 - 432261 - | amino acid carrier protein TERM 314 433346 - 433389 + g 74 -5.2 -4.48987 | gap 1, opp_overlap 433360 TCAGACCCAGGCCGC GCTCGATGTAGAAGGCCG-GG CCG CCACGGTATTCACCGTTGAGC TTTTCCTTGTACACC Pmen_0412 434675 - 433950 - | hypothetical protein Pmen_0413 436208 - 434805 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 315 436352 - 436321 - R 100 -13.8 -4.56775 | opp_overlap 436326, overlap 436326 ACTGCGGCGCAAAAA CAAAACCCCGGC TGCTTGGG GCCGGGGTTTCG TCGCTCTGCAGCGCT TERM 316 436347 - 436326 - R 100 -10.1 -5.26119 | opp_overlap 436326, overlap 436321 GGCGCAAAAACAAAA CCCCGGC TGCTTGGG GCCGGGG TTTCGTCGCTCTGCA TERM 317 436326 - 436347 + r 76 -10.8 -3.78022 | opp_overlap 436326 436321 GGCGCAAAAACAAAA CCCCGGCT GCTTGG GGCCGGGG TTTCGTCGCTCTGCA Pmen_0414 437868 - 436372 - | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 318 436403 - 436442 + g 70 -13.6 -3.0497 | gap 1 ATGGAGAACTCCGCG CCCTCACGCA-CGTTGGCC GAC GGCCAGCGCTGGGTGACGG TCTTGCGCCTGGTGT TERM 319 436810 - 436845 + g 72 -14.6 -2.7185 | overlap 436812 ATAGCCTTCGATCTG CGGGTCGCGGCCATCG ACCA CGACGGTCGCGCCCTG TGCTTCGGCGCTGCT Pmen_0415 439096 - 437939 - | iron-containing alcohol dehydrogenase TERM 320 438449 - 438482 + g 83 -14.5 -3.7282 | GATCAGGCGCATGGC GGCCAGCGCCTGCTG GTCG CTGTAGGGGCTGGCC TTCTTGCTGACGTAG TERM 321 438581 - 438622 + g 74 -2.1 -4.75372 | gap 1, opp_overlap 438604, overlap 438578 CAGCTCGAAGTCGAC CAGCGCGGCGATCGGCAT GAAACCG ACGCCGA-CGCAGAGCAG TTTTTCATCCGTGGT Pmen_0416 440532 - 439138 - | citrate transporter Pmen_0417 440708 - 441466 + | IclR family transcriptional regulator Pmen_0418 441564 - 442154 + | cytochrome B561 Pmen_0419 442213 - 442788 + | YceI family protein TERM 322 442876 - 442846 - T 100 -25.6 -3.14211 | opp_overlap 442846 442852, overlap 442852 ACGCCCTCGCACCAA CGAAAACGCCGCCC ATC GGGCGGCGTTTTCG TTTGCGCGTCAGCTT TERM 323 442846 - 442876 + T 100 -25.6 -3.5764 | opp_overlap 442846 442852, overlap 442852 ACGCCCTCGCACCAA CGAAAACGCCGCCC ATC GGGCGGCGTTTTCG TTTGCGCGTCAGCTT TERM 324 442852 - 442870 + T 100 -17.4 -4.55128 | opp_overlap 442846 442852, overlap 442846 TCGCACCAACGAAAA CGCCGCCC ATC GGGCGGCG TTTTCGTTTGCGCGT TERM 325 442870 - 442852 - T 100 -17.4 -4.45544 | opp_overlap 442852 442846, overlap 442846 TCGCACCAACGAAAA CGCCGCCC ATC GGGCGGCG TTTTCGTTTGCGCGT Pmen_0420 444776 - 442890 - | DEAD/DEAH box helicase domain-containing protein Pmen_0421 445722 - 444964 - | extracellular solute-binding protein Pmen_0422 447148 - 445775 - | hypothetical protein Pmen_0423 448011 - 447247 - | hypothetical protein TERM 326 447343 - 447361 + gr 72 -4.5 -4.52589 | GCTTTGCAGGTAATC CGGCG CCTGCCATT CGCCG TTTTGTATCAGGCCG Pmen_0424 448847 - 447981 - | hypothetical protein Pmen_0425 449065 - 450111 + | recA protein Pmen_0426 450481 - 451080 + | transposase TERM 327 452021 - 452010 - g 87 -7.2 -5.06414 | opp_overlap 452010 452009 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 328 452365 - 452349 - g 79 -2.9 -5.08601 | opp_overlap 452350, overlap 452350 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_0427 451432 - 452733 + | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 329 452857 - 452878 + F 70 -10.1 -3.54424 | CGGTTCTCAGGGGAG GCAGGAGTG GTAA CACCCCTGC TTTACCCGACTGAAG TERM 330 453456 - 453443 - f 71 -8.1 -4.07568 | opp_overlap 453451 TGCCCGTCTTCAAAA TCGGC GAAG GCCGA AGTCGGCCAGAAATA TERM 331 453526 - 453541 + F 79 -7.6 -4.49756 | CACCGATCATGCCGA CTACAC TTAA GTGTAG TTTTAATATTTAACA TERM 332 455090 - 455104 + G 89 -2.1 -5.26119 | TGGAAAAGGGGCCGC GCTAA CCTGT TTGGC TTTTATTTTTGCCAG TERM 333 455181 - 455197 + G 74 -5.2 -4.44548 | opp_overlap 455178 GCCGTGAATAAATTT GCAAAA CAAAA TTTTGC TTTTGGTTGGCTGTA Pmen_0429 453606 - 456260 + | regulatory protein, LuxR Pmen_0430 456310 - 457467 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pmen_0431 459313 - 457751 - | transposase IS66 TERM 334 458244 - 458256 + g 72 -6.9 -4.20354 | overlap 458245 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_0432 459692 - 459333 - | IS66 Orf2 family protein Pmen_0433 459892 - 460230 + | IS66 Orf2 family protein TERM 335 460350 - 460321 - T 100 -16.7 -4.12532 | opp_overlap 460329, overlap 460343 GCCGCTACACATAAA TCGAGTAATGTTG AGCT CAACATTACTCGA TGACTGGGGCCTGGC Pmen_0434 461986 - 460424 - | transposase IS66 TERM 336 460917 - 460929 + g 72 -6.9 -4.20354 | overlap 460918 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_0435 462365 - 462006 - | IS66 Orf2 family protein TERM 337 462594 - 462566 - R 91 -6 -5.4505 | opp_overlap 462548 GCTTTCAAGAAAAAA GCACCCTCTCTA ATGGA TCGAAAGAGTGC TGCGACAGTGACAGA Pmen_0436 463311 - 462619 - | OmpW family protein Pmen_0437 465056 - 463413 - | AMP-dependent synthetase and ligase TERM 338 463614 - 463640 + g 74 -2.3 -4.77157 | gap 1, opp_overlap 463577, overlap 463622 ATTAGGGGATTTAAC TGCGATGAG-GA GAGG TCGCTCGTCCCA TTTTTCGTGCCTTGC TERM 339 463980 - 463998 + g 73 -6 -4.3467 | AGGCGGGCGCCCTTG GCTTTTGC GCA GTGAAAGC TTTTCATCTGGAGAT Pmen_0439 466980 - 465679 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 340 466047 - 466063 + g 79 -2.9 -5.08601 | opp_overlap 466048, overlap 466048 GGTGCTCATCTGCAA ACAGCTG GAA CAGTTGC TTTTTGTTGGCGTCA TERM 341 466391 - 466402 + g 87 -7.2 -5.06414 | opp_overlap 466390 466391 AGCACATCGAGCAAG CGGG CCGG CCCG TTTTTGTTACGCACG TERM 342 467266 - 467251 - R 72 -2.4 -4.76191 | ACATATGAAAACAAA CCCGAG ACAC CACGAG GGATGAAAGAAAGAG TERM 343 468144 - 468134 - R 74 -5.4 -4.56702 | CTTCAAGTAAACAAA CTCT TTT AGAG GGGTCGGCCGAAAGA Pmen_0440 469705 - 468254 - | aldehyde dehydrogenase TERM 344 468462 - 468452 - G 71 -3.2 -4.58663 | ATTAGGGTGCAAAAA GTGC ACG ACAC TCAGATTAACTCCGA Pmen_0441 470285 - 469752 - | rubredoxin-type Fe(Cys)4 protein TERM 345 470338 - 470353 + r 81 -7.6 -4.63932 | ATTTATTTCTCATCT TCTTCC TTGT GGAAGA TTTTCTTACAACCTG Pmen_0442 470719 - 470321 - | rubredoxin-type Fe(Cys)4 protein Pmen_0443 472141 - 470936 - | alkane 1-monooxygenase TERM 346 472073 - 472084 + g 79 -3 -5.01422 | CCACAAAGTTGATAG TATC CAGA GATA TTTCTTTTTATCTAC TERM 347 472142 - 472155 + r 78 -2.4 -5.13741 | GTGTTTCTCAAGCAT TTGG TGTTCT CCAA TTTTTATTAAATTAG TERM 348 472276 - 472291 + r 74 -4 -4.75372 | gap 1, opp_overlap 472279 GGACGCTTGCGCCAA CTACACC TAC GG-GTAG TTTTTGCTCCGTCGT Pmen_0445 473366 - 472350 - | hypothetical protein TERM 349 472518 - 472508 - G 77 -4 -4.7254 | AGTTGCGATGAAAAA CAAT AGC ATTG CTGATGTAGTGAAAT Pmen_0446 475107 - 473359 - | hypothetical protein TERM 350 474205 - 474225 + g 89 -4 -5.27476 | GCCGCCATCTTCTCG GATGGTGA CAAAT TGACCATC TTTTGTTTTCTTGAC TERM 351 474723 - 474735 + g 82 -6.3 -4.84359 | opp_overlap 474723 AGGTCAGATAGCCAA GAATG TTG CATTC TTTTTCTGAGAATAC Pmen_0447 476462 - 475224 - | hypothetical protein Pmen_0448 477354 - 476509 - | 5,10-methylenetetrahydrofolate reductase TERM 352 477381 - 477439 + r 100 -28.4 -2.93723 | gap 1 CCTTCTCAGCGGCAG GCTTCAAGCCTCGAGCTGCAGG-CGGA TCTGGT TCCGTCCTGCGGCTCGAGGCTTGCGGC TGTGGTTAGTAGCGG Pmen_0449 478854 - 477445 - | S-adenosyl-L-homocysteine hydrolase Pmen_0450 479186 - 479572 + | membrane protein-like protein Pmen_0451 479729 - 480175 + | cytochrome c556-like protein Pmen_0452 480570 - 480169 - | hypothetical protein ligB 482342 - 480654 - | NAD-dependent DNA ligase LigB TERM 353 481522 - 481562 + g 77 -12.5 -3.62597 | CCATCGCTGGCGAAG GGCAGGCGATGGCGATACC AAT GCTGACGCCATTGCCTGGC TTCTTCGACGCTGCG TERM 354 482446 - 482462 + r 86 -15.1 -3.34962 | opp_overlap 482446 GGCGCCCAACAAAAA GCCCCGC ATG GCGGGGC TTCTGGGGTGTGCCG TERM 355 482462 - 482446 - R 100 -15.1 -5.06414 | opp_overlap 482446 GGCGCCCAACAAAAA GCCCCGC ATG GCGGGGC TTCTGGGGTGTGCCG Pmen_0454 483673 - 482483 - | S-adenosylmethionine synthetase Pmen_0455 484674 - 483670 - | ArsR family transcriptional regulator TERM 356 484741 - 484712 - R 86 -15.3 -3.32022 | opp_overlap 484714 484718, overlap 484718 TTTTTCATACAGCAA CAGCAATATCAAA AAGT TTTGATATTGCTG TGTGGCTAGTGCGGC TERM 357 484714 - 484739 + r 70 -12.1 -2.92463 | opp_overlap 484712 484718, overlap 484718 TTTCATACAGCAACA GCAATATCAAA AAGT TTTGATATTGC TGTGTGGCTAGTGCG Pmen_0456 485631 - 484747 - | LysR family transcriptional regulator TERM 358 484813 - 484778 - G 79 -8.8 -4.38712 | gap 1 CTCAGCGCCAGAAAA GCG-GCCGGCGCCGGGC TCA GGCTGGCACCGGGGCGC CACAGCACGTGCAGC Pmen_0457 485741 - 486895 + | C4-dicarboxylate transporter/malic acid transport protein Pmen_0458 487008 - 489008 + | transketolase TERM 359 489043 - 489084 + F 95 -20.1 -2.87132 | CGCTTGCGGGAGGGG GCCGGGGAGAGGGTTGCGG CTGT CGGCGGCCCTCTCCCCAGC TCTCTCCCGCCAACG Pmen_0459 489134 - 490201 + | D-erythrose-4-phosphate dehydrogenase pgk 490206 - 491366 + | phosphoglycerate kinase Pmen_0461 491720 - 492046 + | hypothetical protein Pmen_0462 492144 - 493208 + | fructose-1,6-bisphosphate aldolase TERM 360 493258 - 493231 - T 100 -24.2 -4.72272 | opp_overlap 493231 GCGCTGCACGAAAAA CGCCGCGGCTCC TCAC GGAGCCGCGGCG TTTTTTTATGGCCTG TERM 361 493231 - 493258 + T 100 -24.2 -5.626 | opp_overlap 493231 GCGCTGCACGAAAAA CGCCGCGGCTCC TCAC GGAGCCGCGGCG TTTTTTTATGGCCTG Pmen_0463 493970 - 493287 - | hypothetical protein TERM 362 494092 - 494127 + H 82 -11.8 -3.86194 | opp_overlap 494103, overlap 494093 GGTGGGCAGGACTGC CCGTGACAGCAGAGCG GAAG TGCTCTGCTGGCGCGC TTTATAACGGCAATT TERM 363 494093 - 494126 + H 79 -15.3 -2.91395 | opp_overlap 494103, overlap 494092 GTGGGCAGGACTGCC CGTGACAGCAGAGCG GAAG TGCTCTGCTGGCGCG CTTTATAACGGCAAT Pmen_0464 494365 - 494841 + | hypothetical protein Pmen_0465 494855 - 495955 + | glucose sorbosone dehydrogenase TERM 364 496344 - 496298 - g 73 -10.8 -3.68222 | gap 1, opp_overlap 496302, overlap 496303 GCTCAAGGCGAAGAA GGAAATCC-GCGTCGCTTCGC TGTTTC GCGACGCGGCGCCGGCCTTCC TGCAGATGATCGTGG Pmen_0466 496011 - 496502 + | hypothetical protein Pmen_0467 496837 - 496604 - | hypothetical protein Pmen_0468 497382 - 496900 - | GreA/GreB family elongation factor Pmen_0469 499249 - 497444 - | diguanylate cyclase Pmen_0470 501484 - 499316 - | YccS/YhfK family integral membrane protein TERM 365 499474 - 499509 + g 75 -15.4 -2.78816 | gap 1 CTTCGTCGCTGTGAA TCGCCAGCGGGCGTTCG CCG CGCAGGCCCGC-GGCGA TCTCGTCGAGGCTGG Pmen_0471 501656 - 503101 + | nodulation efficiency protein NfeD Pmen_0472 503101 - 503850 + | SPFH domain-containing protein/band 7 family protein TERM 366 505051 - 505093 + G 70 -8.2 -3.91897 | GTCTGCCGTTCCAGT CGGCGGCCGGGGTGCTGGAG CAT CTGTAGCGGCCTGGCGGCGG TTTGTCGCTGCGCAC Pmen_0473 503958 - 505079 + | L-alanine dehydrogenase TERM 367 505492 - 505476 - g 74 -12.3 -3.56325 | GCTCGATAACGACAA CGACCTG GTG CAGGTCG AAGGCCGGGCCGAGG TERM 368 505626 - 505589 - g 77 -13.5 -3.53012 | gap 1, overlap 505590 GGGCGCTGGTGGAAA TCTG-GCAGGTCGATGCC AAC GGCATCTACCTGCACAGC CGTGGCGGCGATCGC TERM 369 505625 - 505590 - g 80 -17 -2.71712 | gap 1, overlap 505589 GGCGCTGGTGGAAAT CTG-GCAGGTCGATGCC AAC GGCATCTACCTGCACAG CCGTGGCGGCGATCG Pmen_0474 505225 - 505968 + | intradiol ring-cleavage dioxygenase Pmen_0475 507874 - 505976 - | citrate transporter Pmen_0476 509234 - 508050 - | hypothetical protein TERM 370 510148 - 510169 + G 75 -2.8 -4.72986 | AGGATGGCAGCTACG CCGCGACG CTCGAA CGCCACGG TTTTTGATCAGCCTC Pmen_0477 509436 - 510176 + | extracellular solute-binding protein Pmen_0478 511411 - 510143 - | response regulator receiver modulated diguanylate cyclase Pmen_0479 512828 - 511452 - | ATP-dependent RNA helicase DbpA TERM 371 511739 - 511753 + g 75 -11.4 -3.65902 | GGTACCAGGCCAGTT CCCTGC CCT GCAGGG TTTCGATGGCCTGGG Pmen_0480 514344 - 512878 - | major facilitator transporter TERM 372 514425 - 514389 - R 81 -13.8 -3.35813 | gap 1, opp_overlap 514389 GCTGACGCGAATTAA TTCGCTCCTACACGGGC CTCT GACCG-GCAGGAGCGAA TCGCTTGGCCAAAAG TERM 373 514450 - 514440 - R 71 -8.2 -4.07687 | ATCGCTTGGCCAAAA GGCC TTG GGCC CTCGCTGCCATCTCA Pmen_0481 516160 - 514463 - | choline dehydrogenase Pmen_0482 517712 - 516240 - | betaine aldehyde dehydrogenase TERM 374 517712 - 517754 + g 82 -4.9 -4.94058 | gap 1, overlap 517714 CGGCGAAACGGGGCA TGGGCTGTCCTCTGGCGCGA ATGA TTG-GCTAGAAAACAGCCTA TTTTATTTAGATTGA TERM 375 518008 - 518032 + r 75 -7.7 -4.1822 | ACCGCCGCCCCCGAC GCGCGTTCGCC ACA GGCTAGCGGGC TTTGTTCAACTGCAG Pmen_0483 518614 - 518024 - | transcriptional regulator BetI TERM 376 518740 - 518797 + r 78 -16.4 -2.60075 | gap 2, opp_overlap 518753 518760, overlap 518760 GCTTATCGGGTACCG GTGGCCGCGGAAACG--ACAAAGCGGGC CGCA GCCCGCTTTGTCGCGTTACCGGGGCGGC GTTACTTCAGCCAGC TERM 377 518782 - 518753 - R 100 -22.3 -3.53012 | opp_overlap 518740 518760, overlap 518760 CGGTGGCCGCGGAAA CGACAAAGCGGGC CGCA GCCCGCTTTGTCG CGTTACCGGGGCGGC TERM 378 518760 - 518775 + r 82 -11.8 -3.92522 | opp_overlap 518753 518760, overlap 518740 CGCGGAAACGACAAA GCGGGC CGCA GCCCGC TTTGTCGCGTTACCG TERM 379 518775 - 518760 - R 84 -11.8 -4.13654 | opp_overlap 518760 518740, overlap 518753 CGCGGAAACGACAAA GCGGGC CGCA GCCCGC TTTGTCGCGTTACCG Pmen_0484 519650 - 518799 - | substrate-binding region of ABC-type glycine betaine transport system Pmen_0485 520791 - 519847 - | substrate-binding region of ABC-type glycine betaine transport system Pmen_0486 521703 - 520819 - | binding-protein-dependent transport systems inner membrane component Pmen_0487 522901 - 521696 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 380 523471 - 523481 + r 73 -4.6 -4.61566 | overlap 523461 CTTTCCGGCCTTGGC CGGG CTG CTCG TTTTGTCGTTTCGAG TERM 381 523632 - 523586 - R 73 -10.1 -3.60792 | opp_overlap 523586 TGGCCAAGGCTCAAA GCCGCGCCG-GGCTTGCTTCGCG GCT CGCCAAGCGAGGCGCAG-GCGGC ATGCCGCGGGGGCTG Pmen_0488 524810 - 523866 - | substrate-binding region of ABC-type glycine betaine transport system Pmen_0489 524902 - 525183 + | hypothetical protein TERM 382 525335 - 525352 + F 73 -4.7 -4.63218 | CCTGTTTGGTGCGCT GCGCGGC GAGG GATGCGC TTTTATTGAACGCGC Pmen_0490 525496 - 526590 + | transcriptional regulator TERM 383 526609 - 526629 + T 100 -19.7 -3.84185 | opp_overlap 526609 GAGCCGCAATGAAAA CGGGGCGCC AGT GGCGCCCCG TTGTATTTGGGTCGC TERM 384 526629 - 526609 - T 100 -19.7 -4.41494 | opp_overlap 526609 GAGCCGCAATGAAAA CGGGGCGCC AGT GGCGCCCCG TTGTATTTGGGTCGC TERM 385 526665 - 526696 + T 85 -16.6 -2.88579 | opp_overlap 526653 526652 AAGCCGTCTGCATCA GGTGTAGGGTGGGC TTCA GCCCACCCTACGGC TCTGTAGAAGATTGG TERM 386 526767 - 526709 - T 76 -15.3 -2.52623 | overlap 526708 526706 GGCTCTGTAGAAGAT TGGCGCGCACAGCGCACCCCACCCA-GTG GCG CCCGTCCGTAGGGTGCGCCGTGCGCACC- GAGGAGCATCAGGCC Pmen_0491 527027 - 526776 - | hypothetical protein Pmen_0492 527826 - 527053 - | electron transfer flavoprotein beta-subunit TERM 387 527512 - 527500 - G 73 -9.1 -3.96148 | opp_overlap 527510 CTCGGCCAGCAGAAA CGGCA GCA TGCCG GAGCCTTCGCCGGTT Pmen_0493 529121 - 527889 - | electron transfer flavoprotein, alpha subunit TERM 388 529182 - 529195 + r 81 -4.5 -5.00616 | gap 1, overlap 529184 CCTCCGCCAGTTCAC GCCTGG CTG CC-GGC TTTTTTGCCGCCACC Pmen_0494 531120 - 529159 - | hypothetical protein Pmen_0495 533333 - 531273 - | NADH:flavin oxidoreductase/NADH oxidase TERM 389 533356 - 533366 + r 78 -4.6 -4.82901 | CCCTCACGGAAAAGC GGCC TGG GGTC TTTTTGTCGGAAGGC Pmen_0496 533962 - 533432 - | hypothetical protein Pmen_0497 535070 - 534093 - | membrane dipeptidase Pmen_0498 536208 - 535258 - | transcriptional regulator Pmen_0499 536433 - 537371 + | substrate-binding region of ABC-type glycine betaine transport system Pmen_0500 537473 - 538357 + | hypothetical protein Pmen_0501 538491 - 539456 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 390 539888 - 539868 - g 72 -13.3 -3.15544 | CCGGAGGGCGAGGAA CTGCTCGCC GCC AGCGAGCAG ATGCTGATGAACATC Pmen_0502 539565 - 540041 + | thioesterase-like protein Pmen_0503 540131 - 541318 + | gamma-butyrobetaine hydroxylase TERM 391 541315 - 541372 + T 78 -10.6 -3.86015 | gap 2, opp_overlap 541323 541330, overlap 541318 541321 CCGCGTGCTGCAGCG CTGA--TATACCCGAAATGCGCGGCGCG GCAG CGCGCCGCGCATGTCCGGCCTACTTCGG TTTGTAAGCGCAATA TERM 392 541318 - 541367 + T 86 -14.9 -3.32997 | opp_overlap 541323 541330, overlap 541315 541321 CGTGCTGCAGCGCTG ATATACCCGAAATGCGCGGCGCG GCAG CGCGCCGCGCATGTCCGGCCTAC TTCGGTTTGTAAGCG TERM 393 541321 - 541364 + T 84 -16.6 -2.83346 | opp_overlap 541323 541330, overlap 541318 541315 GCTGCAGCGCTGATA TACCCGAAATGCGCGGCGCG GCAG CGCGCCGCGCATGTCCGGCC TACTTCGGTTTGTAA TERM 394 541362 - 541323 - T 100 -23.6 -2.87931 | opp_overlap 541321 541318 541315, overlap 541330 TGCAGCGCTGATATA CCCGAAATGCGCGGCGCG GCAG CGCGCCGCGCATGTCCGG CCTACTTCGGTTTGT TERM 395 541355 - 541330 - T 100 -21.9 -3.65425 | opp_overlap 541321 541318 541315, overlap 541323 CTGATATACCCGAAA TGCGCGGCGCG GCAG CGCGCCGCGCA TGTCCGGCCTACTTC Pmen_0504 541759 - 541364 - | hypothetical protein TERM 396 543396 - 543375 - g 70 -12.9 -3.05384 | opp_overlap 543375 GGCGCGCGTACTCAA GGCGCGCGC CGGC GAGCGCGCC TTGCTGCTGGTGGAA TERM 397 543375 - 543396 + G 73 -12.9 -3.23216 | opp_overlap 543375 GGCGCGCGTACTCAA GGCGCGCGC CGGC GAGCGCGCC TTGCTGCTGGTGGAA TERM 398 543753 - 543765 + G 72 -6.9 -4.18367 | overlap 543739 GCCCTGGCTCGGCAT CGCCG GCC TGGCG TTTCTCTATCTGATC Pmen_0505 541984 - 545607 + | membrane protein-like protein Pmen_0506 545604 - 546956 + | hypothetical protein TERM 399 548521 - 548533 + G 71 -9.1 -3.83026 | overlap 548516 548518 GGACAACCTGCGCAG CACCG ATG CGGTG TTTCGTATCGGCGGC Pmen_0507 547154 - 548827 + | diguanylate cyclase with PAS/PAC sensor Pmen_0508 548890 - 549897 + | fructose-1,6-bisphosphatase TERM 400 550210 - 550246 + G 78 -5.9 -4.67353 | gap 3 GAGGCCGGGCTGGAG CGCGGCTGGGACCGTGCG TTGA CGC-CGATC-CAG-CGCG TTTTTGCCTACCTGA Pmen_0509 549901 - 550500 + | hypothetical protein Pmen_0510 550573 - 550824 + | hypothetical protein Pmen_0511 550837 - 551379 + | Lipocalin family protein Pmen_0512 551942 - 551505 - | hypothetical protein Pmen_0513 552021 - 552992 + | proline iminopeptidase TERM 401 553283 - 553248 - g 83 -9.6 -4.34402 | gap 1, opp_overlap 553261, overlap 553249 CGGCCGATACCAAAA GCGGCA-TGCGCCCGAG CTT CTCCAGCGCGGCGCCGC CGGCGCAGGGCGAGG Pmen_0514 552989 - 553426 + | D-tyrosyl-tRNA deacylase TERM 402 553435 - 553493 + T 100 -24.1 -2.58231 | gap 1, overlap 553432 553432 553436 GGTATAGCGGTAGCT -TGTGGGAGCGAGCTCTGCTCGCGACTC GAAT GCTTCGTGAGCAGAGCTCGCTCCTACAG ATTGGTCGTTCTCGT TERM 403 553436 - 553494 + T 72 -11.2 -3.31589 | gap 3, overlap 553432 553432 553435 GTATAGCGGTAGCTT ---GTGGGAGCGAGCTCTGCTCGCGACTC GAAT GCTTCGTGAGCAGAGCTCGCTCCTACAGA TTGGTCGTTCTCGTT Pmen_0515 554218 - 553508 - | hypothetical protein TERM 404 554179 - 554195 + g 72 -13.7 -3.01712 | GGCGTACCCGATCCT CGCCGAC GAA GTCGGCG TCTTCCAGCAGCAGC Pmen_0516 555009 - 554215 - | Sec-independent protein translocase, TatC subunit Pmen_0517 555347 - 555006 - | twin-arginine translocation protein, TatB subunit Pmen_0518 555584 - 555351 - | twin arginine-targeting protein translocase hisE 555942 - 555607 - | phosphoribosyl-ATP pyrophosphatase hisI 556333 - 555935 - | phosphoribosyl-AMP cyclohydrolase Pmen_0521 557987 - 556404 - | 2-octaprenylphenol hydroxylase Pmen_0522 558601 - 557984 - | hypothetical protein ubiE 559371 - 558601 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 405 559603 - 559578 - g 75 -3.2 -4.82901 | gap 1 GTCGCCCGAGAAAAA GCCGAGCGTCT GGCCG AG-CGCCTGGC CAGCGAGTACGACGT Pmen_0524 559518 - 559793 + | putative polyhydroxyalkanoic acid system protein Pmen_0525 559965 - 560411 + | poly(hydroxyalkanoate) granule-associated protein Pmen_0526 560422 - 561276 + | poly(hydroxyalkanoate) granule-associated protein TERM 406 561289 - 561321 + T 100 -20 -4.87626 | opp_overlap 561295, overlap 561290 TGAGTTTCTCGGGAC TGAAAACGCCCGGC CTAGC GCCGGGCGTTTTCG TTTTTCGTCTTAGGG TERM 407 561290 - 561320 + T 100 -21.3 -3.51853 | opp_overlap 561295, overlap 561289 GAGTTTCTCGGGACT GAAAACGCCCGGC CTAGC GCCGGGCGTTTTC GTTTTTCGTCTTAGG TERM 408 561315 - 561295 - T 100 -15.4 -4.18018 | opp_overlap 561290 561289 TCTCGGGACTGAAAA CGCCCGGC CTAGC GCCGGGCG TTTTCGTTTTTCGTC Pmen_0527 561973 - 561359 - | TetR family transcriptional regulator TERM 409 562038 - 562016 - R 72 -11.2 -3.41527 | opp_overlap 562016 562015 562017, overlap 562017 GAAGGGTGACGATAA CCGGCCGGCA GGT TGCCGGCCAT GGCTTTCAACGGATA TERM 410 562037 - 562017 - R 76 -14.7 -2.64595 | opp_overlap 562017 562016 562015, overlap 562016 AAGGGTGACGATAAC CGGCCGGCA GGT TGCCGGCCA TGGCTTTCAACGGAT Pmen_0528 563726 - 562044 - | poly(R)-hydroxyalkanoic acid synthase, class II Pmen_0529 564792 - 563935 - | poly(3-hydroxyalkanoate) depolymerase TERM 411 564849 - 564817 - R 79 -12.7 -3.54424 | overlap 564818 564829 CCCTATCGGTTGAAA CGCTGACAACGACCG TCC CGGCCGTTGCCAGAA TGACCAGGGCGAACC TERM 412 564848 - 564818 - R 73 -14 -2.72511 | overlap 564817 564829 CCTATCGGTTGAAAC GCTGACAACGACCG TCC CGGCCGTTGCCAGA ATGACCAGGGCGAAC TERM 413 564966 - 564993 + r 100 -15.6 -4.44667 | gap 1, opp_overlap 564949 564964, overlap 564968 GTTCGTGCACATAGG TGCCCGGCGCGGC TTC GCCG-GCCGGGTA TTTCTTGTTGCCCAG TERM 414 564968 - 564991 + r 95 -16 -3.82963 | gap 1, opp_overlap 564949 564964, overlap 564966 TCGTGCACATAGGTG CCCGGCGCGGC TTC GCCG-GCCGGG TATTTCTTGTTGCCC Pmen_0530 566625 - 564946 - | poly(R)-hydroxyalkanoic acid synthase, class II TERM 415 566775 - 566788 + r 73 -4.5 -4.66833 | GGAACCTGCCAGTTC CTTGG TTAC CCGAG TTTTTGAAGTTAAGC Pmen_0531 567386 - 567015 - | hypothetical protein TERM 416 567464 - 567406 - R 88 -18.9 -2.90813 | gap 1, overlap 567403 567422 GAGCTCCTGAAACGA TGCAGCCCGGATGCAATCCG-GGACGCT TGCG AGCGCCCGCGGACTGAGTCCGGGCTACG GGCTTACAGAATATA hslU 568808 - 567468 - | ATP-dependent protease ATP-binding subunit Pmen_0533 569378 - 568848 - | ATP-dependent protease peptidase subunit TERM 417 569160 - 569177 + g 77 -11.3 -3.87815 | CTCGACGGCAGCGCG CACCAGG TGGC CCTGGTG TTTCTCCAGCTGGCC Pmen_0534 570149 - 569475 - | sporulation domain-containing protein TERM 418 569918 - 569970 + g 70 -13.2 -3.02144 | gap 1, overlap 569919 569932 569964 AGAAGTCGTACTTGG GCCGCGC-CGGCTCGGCCGGTGCCG GTTT CGGCTCGGGCTTGGTCGTGCGCGCC TGTTCGCCGCGGTCG TERM 419 569919 - 569942 + g 74 -12.4 -3.60475 | gap 1, overlap 569918 569932 GAAGTCGTACTTGGG CC-GCGCCGGC TCG GCCGGTGCCGG TTTCGGCTCGGGCTT TERM 420 570072 - 570084 + g 70 -10.5 -3.67597 | GGCCAGCCAGATCCA GCCGG GTA CCGGC TTCTTGGCTGGCGCC TERM 421 570092 - 570131 + g 78 -9.8 -4.16016 | overlap 570091 570110 GTACCGGCTTCTTGG CTGGCGCCTGGTAGCGGC TGGC GCCGCGCTTGGGTGCCGG TTTCTTGCGCGCTGC argS 571889 - 570150 - | arginyl-tRNA synthetase TERM 422 570930 - 570962 + g 81 -12.8 -3.86897 | gap 1 GCGGGTCGCAGCCAG GTCGGTGGTGGCGTA CAGG TA-GCCGCCACCGGC TTTCTGCACAATCAG Pmen_0536 574292 - 572061 - | primosome assembly protein PriA Pmen_0537 574437 - 574649 + | 50S ribosomal protein L31P TERM 423 574695 - 574727 + G 100 -17.2 -4.3277 | opp_overlap 574702, overlap 574702 GCCACTCCGTGATAC TGAAAAAGGCGTCC CTGGT GGGCGCCTTTTTCA TTTCTCTTCTCTGTG TERM 424 574720 - 574702 - g 81 -8.1 -4.70659 | gap 1, opp_overlap 574702 574695 CGTGATACTGAAAAA GGCGTCCC TGGT GGG-CGCC TTTTTCATTTCTCTT TERM 425 574702 - 574720 + G 95 -9.5 -5.08367 | opp_overlap 574702, overlap 574695 CGTGATACTGAAAAA GGCGTCC CTGGT GGGCGCC TTTTTCATTTCTCTT Pmen_0538 574676 - 575476 + | nuclease TERM 426 576306 - 576335 + G 83 -12.7 -4.03234 | overlap 576307 GGTCTTCGGTGATTC GGCCGCCAGCGGC ATCC GTCGCGGGCGGCA TTTCTATCACGGCGA TERM 427 576307 - 576334 + G 79 -16.2 -3.01726 | overlap 576306 GTCTTCGGTGATTCG GCCGCCAGCGGC ATCC GTCGCGGGCGGC ATTTCTATCACGGCG Pmen_0539 575473 - 576909 + | peptidase M48, Ste24p Pmen_0540 577014 - 578282 + | malate dehydrogenase TERM 428 578296 - 578329 + T 100 -21.3 -3.05384 | opp_overlap 578306, overlap 578299 578306 AAGCCGTTCGGATGC CAACAAAAAACCCGC TTCG GCGGGTTTTTTGTTG TTCGGTGACGGGGGC TERM 429 578299 - 578326 + T 100 -17.2 -3.67597 | opp_overlap 578306, overlap 578296 578306 CCGTTCGGATGCCAA CAAAAAACCCGC TTCG GCGGGTTTTTTG TTGTTCGGTGACGGG TERM 430 578306 - 578319 + T 100 -9.5 -5.64873 | opp_overlap 578306, overlap 578299 578296 GATGCCAACAAAAAA CCCGC TTCG GCGGG TTTTTTGTTGTTCGG TERM 431 578319 - 578306 - T 100 -9.5 -5.46657 | opp_overlap 578306 578299 578296 GATGCCAACAAAAAA CCCGC TTCG GCGGG TTTTTTGTTGTTCGG Pmen_0541 580759 - 578348 - | 1A family penicillin-binding protein TERM 432 579671 - 579693 + g 79 -2.7 -5.03314 | gap 1 CTGCTCTTCGCCGTT GCGG-GTC AGGACGAG GACGCCGC TTTTTTCCACCTGAG Pmen_0542 580941 - 582005 + | type IV pilus assembly protein PilM Pmen_0543 582005 - 582577 + | fimbrial assembly family protein Pmen_0544 582574 - 583194 + | pilus assembly protein, PilO Pmen_0545 583191 - 583718 + | pilus assembly protein, PilQ Pmen_0546 583774 - 585894 + | type IV pilus secretin PilQ aroK 585927 - 586418 + | shikimate kinase TERM 433 587218 - 587196 - g 72 -13.4 -3.17075 | opp_overlap 587199 CTGGCTCGAAGCCAA CATGGCTGCG CTG CGCAGCCTTG ATCAGGATGCCCTGA TERM 434 587199 - 587215 + G 73 -13.7 -3.15544 | opp_overlap 587196 GCTCGAAGCCAACAT GGCTGCG CTG CGCAGCC TTGATCAGGATGCCC aroB 586594 - 587697 + | 3-dehydroquinate synthase Pmen_0549 587708 - 589309 + | sporulation domain-containing protein TERM 435 589321 - 589363 + F 82 -12.7 -3.66908 | gap 1, opp_overlap 589311, overlap 589316 589326 CTAAACGCTCTGCTT GG-CATGACCGCCTGGTCGT TAGC ACGACCTGGCGGTCTTATCC TTCGTTTTCGCGACA TERM 436 589326 - 589357 + F 100 -20.2 -3.6052 | opp_overlap 589311, overlap 589321 589316 CGCTCTGCTTGGCAT GACCGCCTGGTCGT TAGC ACGACCTGGCGGTC TTATCCTTCGTTTTC TERM 437 589883 - 589867 - g 77 -13.7 -3.41745 | GCGCGAGAACATGAA CCGCGAG ATC CTCGCGG CCGGCCTGCAACTGG TERM 438 592842 - 592790 - g 77 -12.1 -3.74693 | gap 3, opp_overlap 592829 CTGGACGTGATCAAA GCGGCCATC--CTCGGCGCCGAGAGC TTCG GCT-TCGGCACCGCGCCGATGGTCGC GCTGGGTTGCAAATA gltB 589547 - 593995 + | glutamate synthase subunit alpha TERM 439 595186 - 595228 + G 77 -12.7 -3.64703 | gap 1, opp_overlap 595195 AGCCGATCCCGGGCT CCGA-GGAGATCATCCCGGC CGAA GCCGTGCTGATCGCCTTCGG TTTCCGTCCGAGCCC gltD 594030 - 595448 + | glutamate synthase subunit beta TERM 440 595491 - 595520 + F 100 -20.9 -4.16943 | opp_overlap 595478 595496, overlap 595496 AATTGACCCGATGGA CAAAAGGCACGGC ACCC GCCGTGCCTTTTG TTTTGCGCTCTGCGA TERM 441 595515 - 595496 - f 100 -15 -4.42653 | opp_overlap 595491 595496 ACCCGATGGACAAAA GGCACGGC ACCC GCCGTGCC TTTTGTTTTGCGCTC TERM 442 595496 - 595515 + F 100 -15 -5.09259 | opp_overlap 595496, overlap 595491 ACCCGATGGACAAAA GGCACGGC ACCC GCCGTGCC TTTTGTTTTGCGCTC hemE 595567 - 596634 + | uroporphyrinogen decarboxylase TERM 443 596650 - 596669 + F 90 -15 -3.58726 | opp_overlap 596652 TCGATCACCCCCACA GAGGCCGC GCGA GCGGCCTC TTCTGTATCCGGCGG Pmen_0553 596765 - 597535 + | cobyrinic acid a,c-diamide synthase TERM 444 597540 - 597567 + T 70 -12.8 -2.91383 | opp_overlap 597540 597546, overlap 597546 ACGCCGGTTGAGAAT GAAAAAGGCGCC TGGT GGCGCCTTTTTG TGTGTCGCTGGCCCT TERM 445 597561 - 597546 - T 100 -11.8 -4.93365 | opp_overlap 597540 597546, overlap 597540 GTTGAGAATGAAAAA GGCGCC TGGT GGCGCC TTTTTGTGTGTCGCT TERM 446 597546 - 597561 + T 100 -11.8 -5.04597 | opp_overlap 597546 597540, overlap 597540 GTTGAGAATGAAAAA GGCGCC TGGT GGCGCC TTTTTGTGTGTCGCT Pmen_0554 598378 - 597581 - | UspA domain-containing protein TERM 447 598392 - 598411 + r 78 -4.2 -4.79955 | opp_overlap 598378, overlap 598393 ATGGTGACGGCTCTC CTGCCGAT ACCA GTCGGCAA TTTTATTGTGCCTGT Pmen_0555 598945 - 598502 - | hypothetical protein TERM 448 599083 - 599105 + r 73 -9 -3.86897 | CCGGACCGTAGGGTG CGCTGTGCGC ACC GGGCACCGCG TTTATCGGCGGTGCG Pmen_0556 599601 - 599167 - | thioredoxin Pmen_0557 601450 - 599660 - | citrate transporter Pmen_0558 603204 - 601741 - | hypothetical protein TERM 449 603220 - 603237 + r 89 -4.7 -5.18726 | overlap 603221 603222 CGGAGGCCTCGTCAG GTCGCCG CGGG CGGCGGA TTTTTCTTGTCGGCG Pmen_0559 606551 - 603216 - | potassium efflux protein KefA TERM 450 603249 - 603270 + g 73 -13.7 -3.17688 | gap 1 CGGATTTTTCTTGTC GGCGGC-GCC GGC GGCGGCCGCC TTGATCACATCCTTC Pmen_0560 608398 - 606653 - | potassium/proton antiporter TERM 451 608549 - 608511 - R 86 -13.7 -3.55071 | gap 1, overlap 608512 TTACATTTTTCTAAA TCGCCCTGAGGCGTGCCC TGTC GGGC-CGCCACGGGGCGT TCGGCTCGATGTCAG TERM 452 608548 - 608512 - R 84 -17.2 -2.72829 | gap 1, overlap 608511 TACATTTTTCTAAAT CGCCCTGAGGCGTGCCC TGTC GGGC-CGCCACGGGGCG TTCGGCTCGATGTCA Pmen_0561 610429 - 608561 - | acyl-CoA dehydrogenase domain-containing protein TERM 453 609271 - 609302 + g 75 -13 -3.35679 | opp_overlap 609256 609271 GCCGGGCAGCATACA GGCCGAGGTCGAAG GCGC CTTCGACATAGGCC TTCTGCGTCAGCAGC Pmen_0562 611622 - 610486 - | 2-nitropropane dioxygenase, NPD Pmen_0563 611804 - 614530 + | type I restriction-modification system, M subunit TERM 454 614973 - 614953 - g 73 -14.1 -3.19602 | overlap 614951 GGCTGCAGATCAAGA TCGCCTCAA TAT TTGAGGCGA CGGACACTCTAATCC Pmen_0564 614523 - 615770 + | restriction modification system DNA specificity subunit Pmen_0565 615763 - 616416 + | hypothetical protein TERM 455 617156 - 617142 - g 73 -4.2 -4.59773 | CTGCATGCCGAAAAA CGTATC AGC GATTCG GACCCGCTTGATGTC TERM 456 617459 - 617473 + G 77 -7.8 -4.33274 | overlap 617457 CATTGCCTTGGAGCG CCTGAC GCA GTCGGG TTTTAGTGCTGTAGC Pmen_0566 616413 - 617495 + | appr-1-p processing domain-containing protein Pmen_0567 617504 - 620767 + | HsdR family type I site-specific deoxyribonuclease Pmen_0568 620768 - 621475 + | hypothetical protein Pmen_0569 621578 - 622426 + | hypothetical protein Pmen_0570 623756 - 622503 - | metal dependent phosphohydrolase Pmen_0571 623974 - 623840 - | hypothetical protein Pmen_0572 624707 - 624048 - | peptide methionine sulfoxide reductase Pmen_0573 627482 - 624759 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 457 627654 - 627669 + G 81 -5.4 -4.84359 | AAACTCATGGCCATG GTGCTT GGCG GAGCAC TTTTTGTGGCCATGC Pmen_0574 627618 - 628151 + | hypothetical protein TERM 458 628271 - 628252 - T 100 -12.1 -5.60993 | CGCGCCATAAAAAAA CCCCGCC TGGATG GGCGGGG TTGAGGGACGAGCGT aceF 630274 - 628304 - | dihydrolipoamide acetyltransferase TERM 459 628950 - 628984 + g 71 -9.1 -3.77832 | CTGCGGTGCAGGTTG GCGGCGCCGACCTGC ATCAG GCGGGTCATCGCCAC TTCTTCGATTTCACC TERM 460 629028 - 629084 + g 82 -15.8 -3.37796 | gap 2 TCCACGGCCGGGATC GGCGGAATGCCGGCGCCGCCGGTAGCGG CTG CAGCTGCCTGCGGCG-CGGCCTTG-GCC TTGTGCATCATCGCC TERM 461 629445 - 629472 + g 79 -13.4 -3.64822 | gap 1 TTGACCAGCACTTCT TCCACCACGCCGG CAG CCGGCGAGG-GGA TTTCCATGGAGGCCT TERM 462 629775 - 629802 + g 70 -9.8 -3.64822 | gap 1 TTGACCAGCACCTGC TCCACCACGCCGG CAG CCGGTGCGG-GGA TTTCCATGGAGGCCT aceE 632931 - 630286 - | pyruvate dehydrogenase subunit E1 TERM 463 633129 - 633163 + H 72 -11.3 -3.33492 | gap 1 CCGCGGTTCTGCCGG CCGCGCG-CGCCCTGC GCCA GCGGGGCTTCGGGCGG TTGTGCCGTGCGTCC TERM 464 633913 - 633887 - g 70 -3.6 -4.46581 | opp_overlap 633896, overlap 633877 CAAAAGCTCATAAAA GCCCTGGACG CCATCAC CGTCGATGGC TTCGTGTTCCGTACC TERM 465 634072 - 634042 - g 73 -13.3 -3.21747 | gap 1 CTACGCCATGATCAA GGCGCGCGTGGTCG GCGG CGACCAGGC-CGCC GGCGCCGAGCTGCTG Pmen_0577 633203 - 636145 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 466 636475 - 636455 - g 73 -12.5 -3.456 | overlap 636451 GAAGAGATCAACGAA GCGCAGCGC ACC GCGGTGCGC GAGAACGGCCTGGAA Pmen_0578 636209 - 637132 + | branched-chain amino acid aminotransferase TERM 467 637150 - 637178 + F 91 -13.2 -3.86015 | gap 1 GATTCCTCGAAGGCT CGA-CGGGGAGGC GAAA GCCTCCCTGGTCG TTTCTGGAAAAGATA Pmen_0579 637193 - 638236 + | lipopolysaccharide heptosyltransferase II TERM 468 638981 - 639000 + G 73 -10.6 -3.64703 | opp_overlap 638975 CGTAGCCAAGGTGAT CGCTGGCG CCAG CGCCTGCG TTTCCGTCGACACCG Pmen_0580 638238 - 639242 + | lipopolysaccharide heptosyltransferase I Pmen_0581 639252 - 640376 + | glycosyl transferase, group 1 Pmen_0582 640382 - 641179 + | lipopolysaccharide kinase Pmen_0583 641179 - 641913 + | lipopolysaccharide kinase Pmen_0584 641910 - 642653 + | lipopolysaccharide kinase Pmen_0585 642653 - 644098 + | hypothetical protein TERM 469 644385 - 644347 - g 72 -8.6 -4.10161 | CAGCATCTTCGAAAA GGCCCGCTGGCAGTACGC CAA GCGCTATGCCTACGCGCC GGATCGCGCCCTCGA Pmen_0586 644111 - 645865 + | carbamoyltransferase Pmen_0587 645852 - 646970 + | glycosyl transferase, group 1 TERM 470 647089 - 647112 + G 75 -3.2 -4.76041 | gap 1, opp_overlap 647089 TTGAGAGCTGTAGAA GCAATCCAG ATATTGA CTGG-TTGC TTTTTAGTGACTGTG Pmen_0588 647007 - 647879 + | hypothetical protein Pmen_0589 647882 - 649027 + | glycosyl transferase, group 1 Pmen_0590 649024 - 649908 + | glycosyl transferase family protein Pmen_0591 649911 - 650567 + | acetyltransferase Pmen_0594 652493 - 654334 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Pmen_0595 654334 - 655230 + | Mig-14 family protein TERM 471 656392 - 656356 - g 73 -13 -3.28712 | gap 1 GGGCCCGGCGGACAA CGGCATCGCCCTG-CCG CCGG CGATCAAGGCGCTGCCG GCCGATCGACTGTGG TERM 472 656544 - 656497 - g 78 -14.1 -3.61398 | gap 2, opp_overlap 656509, overlap 656498 GCTGCCGCTGAAGAA GCGCCTGCGCCGCTCGATCCAGC GCCT GCTGG-CCGGGCGACGCTGGC-C GGCCAGCGGTGAGGA TERM 473 656509 - 656563 + G 74 -12.2 -3.61398 | gap 3, opp_overlap 656497 656498 GAAGCGCCTGCGCCG CTCGATCCAGCGCCTGCTGGCCGGGCG ACGC TGGCCGGCCAGC-GGTGA-GGA-CGAG TTCTTCCGCAAGGCG Pmen_0596 655235 - 656623 + | LmbE family protein Pmen_0597 656685 - 658106 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 474 658966 - 658920 - g 77 -10.6 -3.87815 | opp_overlap 658961 658965 CTCGATGGCGAGAAA GCCCTGGTGCTCGGCGGGCTGG AGG CCAGCCGGCTGATCGTCAGCGC CCAGGCCGGCGACGG Pmen_0598 658257 - 659537 + | acyl-CoA dehydrogenase domain-containing protein TERM 475 659603 - 659575 - g 74 -7.4 -4.19371 | gap 1, overlap 659564 659557 GAAACCCCGAAGAAA TTCCGCGGCCTGC AGCA GCAGGC-GCAGCA AGTGGCCAGGCATTA Pmen_0599 659551 - 660762 + | acyl-CoA dehydrogenase domain-containing protein TERM 476 660791 - 660806 + T 100 -11.8 -5.24129 | opp_overlap 660791 GCCGCCATGAAAAAA GCCCGC ATCT GCGGGC TTTTTTCTAGAAACG TERM 477 660806 - 660791 - T 100 -11.8 -5.14563 | opp_overlap 660791 GCCGCCATGAAAAAA GCCCGC ATCT GCGGGC TTTTTTCTAGAAACG Pmen_0600 661538 - 660813 - | hypothetical protein Pmen_0601 663959 - 661710 - | DNA topoisomerase IV subunit A Pmen_0602 664491 - 663967 - | aspartyl protease-like protein Pmen_0603 665471 - 664488 - | hypothetical protein Pmen_0604 667369 - 665471 - | DNA topoisomerase IV subunit B Pmen_0605 667996 - 667385 - | hypothetical protein TERM 478 668034 - 668020 - R 84 -5.6 -4.91511 | AGGCTACTACAAAAA GCGGCT ATA AGCTGC AAGCCGCAAGCTACA Pmen_0606 668924 - 668109 - | calcineurin phosphoesterase C-terminal domain-containing protein Pmen_0607 669517 - 669071 - | hypothetical protein Pmen_0608 670113 - 669514 - | NUDIX hydrolase Pmen_0609 672100 - 670217 - | thiamine biosynthesis protein ThiC TERM 479 672056 - 672080 + g 76 -2.2 -4.95547 | gap 1, overlap 672054 672058 TACCGACTGCTGATC G-ACCTGAG CCGATTCA CTCAGGTTC TTTTGTTGTTGTGCG TERM 480 672058 - 672077 + g 72 -5 -4.55653 | overlap 672054 672056 CCGACTGCTGATCGA CCTGAG CCGATTCA CTCAGG TTCTTTTGTTGTTGT TERM 481 673363 - 673326 - g 73 -11.1 -3.65812 | overlap 673323 GGCTGCTGAAGAGAA CCTGCGCCAGCGCAAGG CCGG CCATGCGCCGACCCTGG ACGCCGTGGCCAGCT Pmen_0610 672523 - 673965 + | TolC family type I secretion outer membrane protein TERM 482 674005 - 673987 - T 100 -11.7 -5.26875 | opp_overlap 673982 673987 TGCGCAACGAAAAAA GCCCGAC TTCGT GTCGGGC TTTTGCTTTATAGGC TERM 483 673987 - 674005 + T 95 -11.7 -4.61873 | opp_overlap 673987, overlap 673982 TGCGCAACGAAAAAA GCCCGAC TTCGT GTCGGGC TTTTGCTTTATAGGC Pmen_0611 675363 - 674098 - | 3-deoxy-D-manno-octulosonic-acid transferase Pmen_0612 676294 - 675407 - | LysR family transcriptional regulator Pmen_0613 676383 - 676715 + | small multidrug resistance protein TERM 484 677735 - 677768 + G 87 -15.2 -3.85698 | GGACCGTGCCGAGCC GGCGCAGTCCGGCC TGGTAC GGCCGGACAACGCC TTTCTCGCCGAGCAG Pmen_0614 676779 - 677954 + | FAD dependent oxidoreductase Pmen_0615 677951 - 678763 + | aldo/keto reductase Pmen_0616 678905 - 679816 + | hypothetical protein TERM 485 679840 - 679898 + T 100 -26.2 -2.82491 | gap 1, overlap 679873 679895 TCTTGGGGAGCGCTG -GTGCGCATGGCGCACCCTACGGGTCG TAGCGT CGCGTCGTAGGGTGCGCCATGCGCACC TCTGGTCGGTGTGTC Pmen_0617 681545 - 680013 - | hypothetical protein TERM 486 680746 - 680797 + g 71 -9.2 -3.84648 | overlap 680750 CGCTCGCTGACCTCG GCCTCCTCGTCGAGCTCGACGAAG GCGC CGTCGTCCGGCTCGTCCAGGTAGC TTTCGTCCTCTTCGA Pmen_0618 681646 - 682935 + | phosphoserine phosphatase TERM 487 682980 - 682943 - T 100 -25.9 -3.95424 | opp_overlap 682947 682954, overlap 682947 682954 AGGAGTAAGACCAAA CAAACGAAAAAGCCGCC CTCG GGCGGCTTTTTCGTTTG CGCGGCATCATTCGT TERM 488 682947 - 682976 + T 100 -20.9 -3.5393 | opp_overlap 682943 682947 682954, overlap 682954 GTAAGACCAAACAAA CGAAAAAGCCGCC CTCG GGCGGCTTTTTCG TTTGCGCGGCATCAT TERM 489 682976 - 682947 - T 100 -20.9 -4.56883 | opp_overlap 682947 682954, overlap 682943 682954 GTAAGACCAAACAAA CGAAAAAGCCGCC CTCG GGCGGCTTTTTCG TTTGCGCGGCATCAT TERM 490 682969 - 682954 - T 100 -11.8 -5.13137 | opp_overlap 682954 682947, overlap 682947 682943 CAAACAAACGAAAAA GCCGCC CTCG GGCGGC TTTTTCGTTTGCGCG TERM 491 682954 - 682969 + T 100 -11.8 -4.98531 | opp_overlap 682947 682943 682954, overlap 682947 CAAACAAACGAAAAA GCCGCC CTCG GGCGGC TTTTTCGTTTGCGCG Pmen_0619 685057 - 682988 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Pmen_0620 686924 - 685122 - | hypothetical protein psd 687951 - 687091 - | phosphatidylserine decarboxylase TERM 492 687706 - 687735 + g 70 -10.7 -3.53091 | gap 1, overlap 687705 GCAGAGAATGGCGCC GGGGGT-CTCGTCC AGA GGACGGGCACCCGC TTTCAGCGCGCGGGT TERM 493 687778 - 687798 + g 72 -13.3 -3.11634 | GAAATGCTCGTAAGC GCTCAGGTC CTC GACCTGGGC TTCGCTCATGTCGAC Pmen_0622 688823 - 688008 - | rhodanese domain-containing protein Pmen_0623 690413 - 688890 - | HDOD TERM 494 690047 - 690033 - G 72 -11.4 -3.53224 | opp_overlap 690043, overlap 690036 CAGCCGGGCGCCAAA CAGGCC GCG GGCCTG CTGGCTGGCGTGCTG TERM 495 690318 - 690363 + g 72 -14 -3.01712 | gap 1, opp_overlap 690318 CAGGGTGCGACGCAA GC-GCGCATGCTGCTCCTGCT CGATT GGCAGGGGCAGCTTGCCCAGC TGTTGCAACCAGGCG Pmen_0624 690531 - 691382 + | flagellar motor protein MotA TERM 496 691497 - 691509 + G 75 -9.1 -4.12254 | overlap 691451 CGCCGACTTCGCCAC CGCCA TGA TGGCG TTCTTTCTGGTCATG TERM 497 692292 - 692256 - g 79 -16.5 -3.03159 | overlap 692245 GCAAGGTGGCGAAGA GCCGCCCGCTCCGGC CGACGGC GCCGCACCGGGCGGC GCGGCGAACGAACCG motB 691399 - 692388 + | flagellar motor protein MotB Pmen_0626 693413 - 692382 - | ribosome-associated GTPase Pmen_0627 693550 - 694293 + | hypothetical protein Pmen_0628 694350 - 694892 + | oligoribonuclease Pmen_0629 696071 - 694998 - | putative iron-sulfur cluster binding protein TERM 498 697244 - 697259 + G 75 -11.8 -3.73775 | TGCTGACCCCGCATC CGGGCG AGGC CGCCCG TTTGCTGGGCGTGGC TERM 499 697315 - 697329 + G 79 -11.4 -3.86916 | CCCGCCGCCGCGCGG GCGCTG GCC CAGCGC TTTGGTCTGGTGGTG Pmen_0630 696133 - 697632 + | carbohydrate kinase, YjeF related protein TERM 500 697833 - 697847 + G 75 -9.2 -4.06502 | opp_overlap 697832 GAGCCCTACGAAATC GGTGCG CTG CGCGCC TTTCATTTCGACCTC Pmen_0631 697620 - 698087 + | hypothetical protein Pmen_0632 698110 - 699525 + | N-acetylmuramoyl-L-alanine amidase mutL 699534 - 701405 + | DNA mismatch repair protein miaA 701405 - 702379 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 702481 - 702741 + | RNA-binding protein Hfq TERM 501 702852 - 702885 + G 85 -15.3 -3.63515 | overlap 702852 CCAGGAGTTCCAGGA GCTGGCCATGTCGGC GGGC GCCGACATGGTCGCC TTCTTCAGCGTGCCC TERM 502 702852 - 702884 + G 77 -16.4 -2.77895 | gap 1, overlap 702852 CCAGGAGTTCCAGGA GCTGGCCATGTCGGC GGGC GCCGACATGGTC-GC CTTCTTCAGCGTGCC Pmen_0636 702754 - 704055 + | GTP-binding protein, HSR1-related TERM 503 704104 - 704131 + F 73 -9 -3.91897 | gap 1, overlap 704108 GCTTTCGGTAGCATT G-GCCGGCGCGCC GTG GGCGCGCCTTCGC TTTATCAGTACGGAG TERM 504 704108 - 704126 + F 93 -17.4 -3.33711 | overlap 704104 TCGGTAGCATTGGCC GGCGCGCC GTG GGCGCGCC TTCGCTTTATCAGTA Pmen_0637 704153 - 705322 + | HflK protein Pmen_0638 705322 - 706191 + | HflC protein TERM 505 706294 - 706310 + F 100 -13.7 -5.14477 | TGGTATCATGCGGCA GCCGGGA AAA TCCCGGC TTTTTTGCGTCTGTG Pmen_0639 706332 - 706517 + | hypothetical protein hisZ 706555 - 707742 + | ATP phosphoribosyltransferase regulatory subunit Pmen_0641 707799 - 709094 + | adenylosuccinate synthetase TERM 506 709113 - 709128 + F 100 -11.8 -5.26316 | opp_overlap 709113, overlap 709125 CCACCGTGCTGAAAA GCCGCC TTCG GGCGGC TTTTTTGTGGCCTGC TERM 507 709128 - 709113 - f 84 -11.8 -4.08216 | opp_overlap 709113 709125 CCACCGTGCTGAAAA GCCGCC TTCG GGCGGC TTTTTTGTGGCCTGC TERM 508 711075 - 711054 - g 78 -15.1 -3.34344 | GCATGGCGCAATCAA CGCCGCGAC TCAG GCCGCGGCG CATCAGGCCGAGGGC Pmen_0642 709303 - 711237 + | methyl-accepting chemotaxis sensory transducer TERM 509 711319 - 711336 + F 100 -11.3 -5.12707 | opp_overlap 711319 GCAGGCAATAAAAAA CCGAGTC ATCT GACTCGG TTTTTTGAAATTTGG TERM 510 711336 - 711319 - f 100 -11.3 -5.4833 | opp_overlap 711319 GCAGGCAATAAAAAA CCGAGTC ATCT GACTCGG TTTTTTGAAATTTGG TERM 511 711628 - 711613 - f 75 -7.6 -4.18018 | opp_overlap 711612 711607 CCTGGGCACTGAAAA CGATGA ATCA TCATCG GCTTCGTGTTACAAC TERM 512 713762 - 713721 - g 75 -4.3 -4.58395 | gap 1, overlap 713722 GCGACCCTGGAAAAA CTCGGCGA-GCAATGCTCGA TGA CCGAGCGCCGCGCCGACGAA GCGACGCGCGACGTG TERM 513 714260 - 714211 - g 71 -3.4 -4.63218 | gap 2, overlap 714212 CGCCGGCGAAGAAAA CGTC-CAGCCATCG-CAAGGGCGC GCCT GCGCCCAAGGCCAAGGCCGAGACA AGCGGTAGCAAGCCG Pmen_0643 711813 - 714299 + | RNAse R TERM 514 714741 - 714692 - g 93 -15.8 -4.05446 | opp_overlap 714690 GTGCCCAAGGACAAA TCCGCCAC-CCTCAACGCCACCGT ACGC AAGGTGGCG-TGCGGCGCGGCGGA GGTGATTCCGCTGGT Pmen_0644 714296 - 715048 + | RNA methyltransferase TERM 515 715070 - 715128 + F 78 -7.3 -4.59773 | gap 1, opp_overlap 715102, overlap 715071 AAATAATCGCCAATT CGCCTTGCGT-GCGGCAGGGGGCTTC TCTAGAAT GGCGCCCCTTGCCGTGACGGCAGGCC TTTTTGCGCCTACCG TERM 516 715564 - 715547 - g 70 -2.6 -4.65747 | overlap 715548 GAAGGCCGAAGAAAA CCGCAG TGAGCG CCGCGA GCGTCGTGAACGTCC rpsF 715224 - 715646 + | 30S ribosomal protein S6 rpsR 715675 - 715905 + | 30S ribosomal protein S18 TERM 517 716006 - 716025 + G 77 -7.8 -4.43477 | overlap 716006 715999 716009 TCGTGGTGGTGGGAT CGGCAGCG ATGC CGCTGTTG TTTTGGTTGAGTGCC TERM 518 716009 - 716022 + G 77 -8.1 -4.33004 | overlap 716006 715999 716006 TGGTGGTGGGATCGG CAGCG ATGC CGCTG TTGTTTTGGTTGAGT Pmen_0647 715942 - 716835 + | hypothetical protein TERM 519 716897 - 716882 - g 79 -2.5 -5.00616 | TCCTGCTGGAAAAAA TCGCC AATCTG GGCAA CCTGGGCGACAAAGT TERM 520 717056 - 717043 - g 75 -6.7 -4.30719 | GCTGCCGAGAAGAAA GCTTC CGCC GAAGC TCGCGCTGCCCAACT rplI 716857 - 717303 + | 50S ribosomal protein L9 TERM 521 717350 - 717389 + F 100 -15 -5.31275 | opp_overlap 717352 717353, overlap 717353 GTGCCGGTCTGCCAA AATCGGGCACGTCATTGC GCAA GCGGTGACGTGCCCGTTG TTTTTTCTACTGCAG TERM 522 717387 - 717352 - f 95 -13.2 -4.07568 | opp_overlap 717350 717353, overlap 717353 GCCGGTCTGCCAAAA TCGGGCACGTCATTGC GCAA GCGGTGACGTGCCCGT TGTTTTTTCTACTGC TERM 523 717353 - 717386 + F 100 -21.1 -4.74611 | opp_overlap 717352 717353, overlap 717350 CCGGTCTGCCAAAAT CGGGCACGTCATTGC GCAA GCGGTGACGTGCCCG TTGTTTTTTCTACTG TERM 524 717386 - 717353 - f 87 -16.7 -3.04398 | opp_overlap 717353 717350, overlap 717352 CCGGTCTGCCAAAAT CGGGCACGTCATTGC GCAA GCGGTGACGTGCCCG TTGTTTTTTCTACTG Pmen_0649 717423 - 718817 + | replicative DNA helicase TERM 525 718873 - 718844 - f 100 -16.4 -4.4078 | opp_overlap 718844 CCTGCTCAATGAAAA CGGGCGCCCAGC GGTTAA GATGGGCGCCCG TTTTTCGTTCAGGCT TERM 526 718844 - 718873 + F 100 -16.4 -4.86621 | opp_overlap 718844 CCTGCTCAATGAAAA CGGGCGCCCAGC GGTTAA GATGGGCGCCCG TTTTTCGTTCAGGCT Pmen_0650 718895 - 719971 + | alanine racemase Pmen_0651 721877 - 719994 - | diguanylate cyclase TERM 527 720318 - 720296 - G 77 -16.3 -2.70932 | CGCTGCCGCCAATCA GGGCGGCGA ACTCG TCGCCGCCC AGGCGCGCAACCGCA TERM 528 720775 - 720762 - G 72 -5.3 -4.41494 | GAGGGCGAACGAAAA CAGAA TGGT TTCTG CCGCGACCGAGATAG TERM 529 722694 - 722670 - g 74 -12.8 -3.53012 | GCGCCGTTGTGGAAA TCGCCCAGCG TCTGT CGCGGGGCGA GAAGGTCGAAGCCAT Pmen_0652 722078 - 724369 + | hypothetical protein TERM 530 724372 - 724400 + F 93 -15.4 -3.49475 | opp_overlap 724377, overlap 724377 CGCGCCGCGCTGAAT GAGAACGCCAGC CTAGT GCTGGCGTTTTC TTGTCTGGCGATCGA TERM 531 724395 - 724377 - f 74 -11.7 -3.50853 | opp_overlap 724372 724377 CGCGCTGAATGAGAA CGCCAGC CTAGT GCTGGCG TTTTCTTGTCTGGCG TERM 532 724377 - 724395 + F 100 -11.7 -4.84311 | opp_overlap 724377, overlap 724372 CGCGCTGAATGAGAA CGCCAGC CTAGT GCTGGCG TTTTCTTGTCTGGCG Pmen_0653 724487 - 725734 + | hypothetical protein TERM 533 725890 - 725860 - g 86 -18.3 -3.16564 | gap 1 GGTGTATTGCAGCAA CGC-GGCGGCCAGC TGCA GCCGGCCGCCGGCG TGCTGCCCTACGACC TERM 534 726738 - 726705 - g 85 -13.9 -4.07568 | CGGTGCGCCGGAAAA GTCGGTGCTGAGC TTCCGTCT GCACAGCACCGAC CCCAGCATCATGATG Pmen_0654 725731 - 726837 + | hypothetical protein Pmen_0655 727025 - 730318 + | transglutaminase domain-containing protein Pmen_0656 730430 - 732916 + | hypothetical protein Pmen_0657 732913 - 733806 + | transglutaminase domain-containing protein TERM 535 733834 - 733817 - T 86 -12.7 -3.87373 | GATAGGCGGGATAAA GGGCCTC GCCT GAGGCCC TTGGGGTGACTCAGT Pmen_0658 734294 - 733845 - | azurin Pmen_0659 735619 - 734684 - | hypothetical protein Pmen_0660 736272 - 735685 - | hypothetical protein Pmen_0661 737123 - 736509 - | lysine exporter protein LysE/YggA TERM 536 736794 - 736779 - G 70 -11.8 -3.35679 | overlap 736780 GTTGGTCAGCGACAA CGCCGC GCCG GCGGCG AATGCGCCACCGGCC TERM 537 737363 - 737385 + r 73 -4.9 -4.71426 | overlap 737346 CCAGCTATCTGAGGA TTGTCCACG ATAGC TGTGGATAA TTTTGTTGGTAAGGC Pmen_0662 738559 - 737645 - | glycerophosphodiester phosphodiesterase Pmen_0663 739274 - 738702 - | HupE/UreJ protein Pmen_0664 739910 - 739296 - | urease accessory protein UreG Pmen_0665 740601 - 739927 - | urease accessory protein UreF ureE 741139 - 740639 - | urease accessory protein UreE Pmen_0667 742001 - 741303 - | TetR family transcriptional regulator TERM 538 742612 - 742668 + G 86 -16.6 -3.53761 | overlap 742581 GACGCGCTGGCGCGG GGCTTCGCTGCGCC-GGTGACGCTGCTG CAT CAGGTGCGTCGCCAGGGGCAGC-AGGCC TTTGCCGAGGAGTTG Pmen_0668 742087 - 743175 + | ferredoxin Pmen_0669 743172 - 744254 + | fatty acid desaturase TERM 539 744277 - 744294 + T 86 -14.1 -3.55444 | opp_overlap 744266 744277 GAAAGGCATAAAAAA GCCCGGC ATGC GCCGGGC TTTGGGGGGTGACGC TERM 540 744294 - 744277 - T 100 -14.1 -5.33866 | opp_overlap 744277, overlap 744266 GAAAGGCATAAAAAA GCCCGGC ATGC GCCGGGC TTTGGGGGGTGACGC Pmen_0670 744795 - 744316 - | hypothetical protein Pmen_0671 745070 - 745969 + | auxin efflux carrier Pmen_0672 746063 - 747010 + | alpha/beta hydrolase fold Pmen_0673 747169 - 747675 + | tripartite ATP-independent periplasmic transporter DctQ TERM 541 747944 - 747983 + G 100 -20.8 -3.23216 | gap 1 CATGTTCCACGTGTG GATGG-GCCCGCTGCCGGG GGG CCTGGCGGTGGGCACCATC TTCCTGATGGTGGCG Pmen_0674 747675 - 749000 + | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 542 749031 - 749011 - f 90 -14.7 -3.6682 | GTTGATTCACGGAAA TCGGCGCGC CTG GCGCGCCAA CAGTCGAGCCGGCGC Pmen_0675 749136 - 750173 + | TRAP dicarboxylate transporter- DctP subunit TERM 543 750227 - 750196 - f 82 -13.1 -3.60296 | gap 2, opp_overlap 750198 750199, overlap 750199 CAGCGTCAGGCGAAA CCATGCGCCCGTACC GCGA GGTACGGGCGC--GG TTCTATTGGCGAGGC TERM 544 750198 - 750227 + F 93 -15.7 -3.65812 | opp_overlap 750196 750199, overlap 750199 GCGTCAGGCGAAACC ATGCGCCCGTACC GCGA GGTACGGGCGCGG TTCTATTGGCGAGGC TERM 545 750226 - 750199 - f 85 -17 -2.92613 | opp_overlap 750199 750198, overlap 750196 CGTCAGGCGAAACCA TGCGCCCGTACC GCGA GGTACGGGCGCG GTTCTATTGGCGAGG TERM 546 750199 - 750226 + F 88 -19.2 -2.79273 | opp_overlap 750196 750199, overlap 750198 CGTCAGGCGAAACCA TGCGCCCGTACC GCGA GGTACGGGCGCG GTTCTATTGGCGAGG TERM 547 750309 - 750336 + F 70 -3.2 -4.58395 | overlap 750308 750310 CACCCTACGGTTAGT CCTGCCGGCCTG GCGC CGCGCAGGCAGA TTTTTCCCGCCTCGA TERM 548 751587 - 751551 - g 70 -11.6 -3.35679 | gap 2, opp_overlap 751559 CCCCGGCAGCGACAA GTC-GCAGCGCC-AGGAG TAC CGCCTCGGCGCCGCCGAC GGCAATCCCTTCCTG Pmen_0676 750514 - 751887 + | L-glutamine synthetase Pmen_0677 751987 - 753375 + | aldehyde dehydrogenase Pmen_0678 753384 - 754553 + | iron-containing alcohol dehydrogenase TERM 549 754593 - 754651 + T 95 -19.1 -3.32066 | gap 1, overlap 754593 GCTTTGCCGTAGATC -TTGTAGGAGCCGGCTTGCCGGCGAT CATCGCGA ATCGCCCGCAAGCGGGCTCCTACAGG TTATGCGGGCTTATT TERM 550 754593 - 754650 + T 100 -25.1 -2.58758 | overlap 754593 GCTTTGCCGTAGATC TTGTAGGAGCCGGCTTGCCGGCGAT CATCGCGA ATCGCCCGCAAGCGGGCTCCTACAG GTTATGCGGGCTTAT Pmen_0679 755195 - 754662 - | hypothetical protein TERM 551 754839 - 754821 - G 73 -13.8 -3.12449 | overlap 754819 754815 754817 GTCCACCAACACATA GCCGCCGG TTT CCGGCGAC AGCGCCGAGAGCTGC Pmen_0680 755733 - 755251 - | hypothetical protein Pmen_0681 756090 - 755734 - | hypothetical protein Pmen_0682 757463 - 756198 - | molecular chaperone-like protein TERM 552 757348 - 757331 - G 71 -2.7 -4.63218 | opp_overlap 757331 757338 CGGTGTTGAAGAAAA TCACC GAGGGCAG GGTGA TCTTGCCGTCTTCCA Pmen_0683 758505 - 757531 - | integral membrane protein-like protein Pmen_0684 759135 - 758698 - | membrane protein-like protein Pmen_0685 759898 - 759170 - | hypothetical protein Pmen_0686 760066 - 760989 + | periplasmic binding protein/LacI transcriptional regulator Pmen_0687 761069 - 761836 + | extracellular solute-binding protein TERM 553 762770 - 762826 + G 83 -15.7 -3.59202 | overlap 762794 CGCTTCGCCCGCCTG CAGGCGCAGCAGCTGGCCGCCCGGC AGCAGGC GCTGGCCACCTGGCTGCCGCGCCTG TTCTATCTGGCCGTG TERM 554 762884 - 762919 + G 79 -11.8 -3.78775 | gap 1, overlap 762887 ACCGGCGGTGGATTC TTCCCGGCGCTGCCGGC GGG GCTGGCTG-GCCGGTAA TTTGCTGGTCAGGCG TERM 555 762887 - 762916 + G 70 -13.5 -2.98493 | gap 1, overlap 762884 GGCGGTGGATTCTTC CCGGCGCTGCCGGC GGG GCTGGCTG-GCCGG TAATTTGCTGGTCAG Pmen_0688 761918 - 762919 + | type II secretion system protein Pmen_0689 763047 - 763919 + | 2,3-dimethylmalate lyase Pmen_0690 763989 - 764255 + | hypothetical protein Pmen_0691 764334 - 764777 + | hemerythrin HHE cation binding domain-containing protein TERM 556 764809 - 764791 - T 75 -13.8 -2.96235 | opp_overlap 764791, overlap 764786 GAGAGACCAATGAGA GCCGGGCA TAA CGCCCGGC TTTTGCGTCAGAACA TERM 557 764791 - 764809 + T 95 -13.1 -4.18018 | opp_overlap 764791 764786 GAGAGACCAATGAGA GCCGGGC ATAAC GCCCGGC TTTTGCGTCAGAACA TERM 558 764848 - 764830 - T 78 -5.2 -4.73682 | overlap 764832 764833 CGTCAGAACAGAAAA TACCGCTG CGC CATCGGCA GCACCTCGGCCGGCT ureC 766517 - 764817 - | urease subunit alpha TERM 559 765357 - 765371 + g 72 -5.6 -4.34759 | overlap 765339 CGGCACGTCTTCGGG CAGAGC GCC GCGCTG TTTCTTCATCTTGTC TERM 560 765494 - 765462 - G 91 -13.4 -4.21194 | opp_overlap 765460 GCTGATCATGGAAAA GGCGCCGAGGTCAT GCAGG ATGTCCTCGGCGGC GATGGTCTCGCGGCG TERM 561 766392 - 766418 + g 73 -3.6 -4.67234 | overlap 766397 766408 GCCGCCGCCGAACTT CACTTCTTCGCC GTA GGTGGTGAAGTC TTTTTCCACTTCGAT TERM 562 766533 - 766549 + r 72 -13.7 -2.61511 | overlap 766532 TGGCTCGTCCCGTAG GGTGCGC TGT GCGCACC GTTGCTATCTGTGTC ureB 766910 - 766605 - | urease subunit beta Pmen_0694 767418 - 766918 - | GCN5-related N-acetyltransferase ureA 767724 - 767422 - | urease subunit gamma TERM 563 767838 - 767896 + r 100 -36.4 -3.86981 | GCTGTACTGCAATTT GTAGGAGTCGGCTTGCCGGCGATTAG GCCTCTG CTGATCGCCGGCAAGCCGGCTCCTAC TTGTTCGTTGTGCTC Pmen_0696 768746 - 767910 - | urease accessory protein UreD TERM 564 768594 - 768620 + g 77 -10.9 -3.85698 | gap 1 GATGATGTGCTGGCA CACCTCCG-GCC CCTC GGCGTGGAGGTG TTTCTGCACCCGGAG Pmen_0697 769682 - 768984 - | ABC transporter related Pmen_0698 770613 - 769771 - | ABC transporter related Pmen_0699 771701 - 770610 - | inner-membrane translocator TERM 565 770699 - 770679 - G 72 -4.5 -4.51812 | overlap 770681 GGTGACAACAATAAA CAGCGCGCC CAG GGCGAACAG CCAGTACTCCGGGAA Pmen_0700 773269 - 771701 - | inner-membrane translocator Pmen_0701 774692 - 773427 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pmen_0702 775489 - 774767 - | GntR family transcriptional regulator Pmen_0703 779120 - 775491 - | urea amidolyase related protein TERM 566 778847 - 778818 - G 72 -13.5 -3.14931 | CGTAGGGCCGACGAA GGCGATGCCGGCG GCTT CGCAGGCATCGGC GAACTCGGCACTCTC Pmen_0704 781052 - 779238 - | amidase TERM 567 781249 - 781307 + r 78 -15.8 -2.64155 | overlap 781217 781216 781260 781287 CGCAACGGGCATGTA GCGTGCGCCGTGCACACCGCCGGGGTTC TGT GATGACCGCTGGTGCGCATGGCGCACCC TACATTTACGGCACC Pmen_0705 781909 - 781313 - | multiple antibiotic resistance (MarC)-related protein Pmen_0706 784729 - 781943 - | integral membrane sensor hybrid histidine kinase TERM 568 784786 - 784824 + r 80 -15.2 -3.05463 | opp_overlap 784788, overlap 784788 ATTTGCTCGGGGGAA TACGGCGCGGCGGGGCTT TTT ATGGCCTGCCGCGGCGTA TTCCCTGAGCGGCCT TERM 569 784788 - 784822 + r 76 -13.4 -3.08679 | opp_overlap 784788, overlap 784786 TTGCTCGGGGGAATA CGGCGCGGCGGGGCTT TTT ATGGCCTGCCGCGGCG TATTCCCTGAGCGGC Pmen_0707 786128 - 784839 - | phosphoribosylamine--glycine ligase purH 787955 - 786348 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 570 787992 - 788010 + r 89 -13.1 -4.09739 | opp_overlap 787992 TAAATCAGTGAAAAA GGGCGGC ACCTG GCCGCCC TTTTCCGGGAATTCG TERM 571 788010 - 787992 - R 100 -13.1 -4.72386 | opp_overlap 787992 TAAATCAGTGAAAAA GGGCGGC ACCTG GCCGCCC TTTTCCGGGAATTCG fis 788347 - 788027 - | DNA-binding protein Fis Pmen_0710 789342 - 788344 - | nifR3 family TIM-barrel protein TERM 572 788683 - 788709 + g 74 -2.1 -4.83615 | opp_overlap 788678 788674 CAGCAAGGCATCGGC GCCGGTGGCGT CGAGC ACGGCCTTGGC TTTTTGTGGGGAGTC Pmen_0711 790844 - 789570 - | Zinc finger-domain-containing protein TERM 573 790652 - 790667 + g 75 -11.8 -3.66874 | GCTGGAGCTTGGTGG CCGGCG CGGG CGCCGG TTTGGCTGCGCTTGG prmA 791880 - 791002 - | ribosomal protein L11 methyltransferase TERM 574 792003 - 791972 - R 100 -18.8 -3.53012 | opp_overlap 791978, overlap 791973 791978 GCCGCCGGCCGGAAA CGACAAGGGCCGCC AGAT GGCAGCCCTTGTCA TGCAGCGAGTCAGGA TERM 575 792002 - 791973 - R 95 -20.1 -2.71712 | opp_overlap 791978, overlap 791972 791978 CCGCCGGCCGGAAAC GACAAGGGCCGCC AGAT GGCAGCCCTTGTC ATGCAGCGAGTCAGG TERM 576 791997 - 791978 - R 82 -12.8 -3.60151 | opp_overlap 791978, overlap 791973 791972 GGCCGGAAACGACAA GGGCCGCC AGAT GGCAGCCC TTGTCATGCAGCGAG Pmen_0713 793375 - 792020 - | acetyl-CoA carboxylase biotin carboxylase subunit Pmen_0714 793857 - 793393 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit Pmen_0715 794354 - 793908 - | 3-dehydroquinate dehydratase dipZ 796285 - 794498 - | thiol:disulfide interchange protein precursor Pmen_0717 798407 - 796443 - | methyl-accepting chemotaxis sensory transducer TERM 577 797898 - 797933 + g 73 -13.8 -3.14463 | opp_overlap 797893 797894 GCTGATGAAACGCTC GCGGGCGTGCGCCAGC TTCA GCAGGCGCGAGCCGGC TTCCTGCAACGGCTT Pmen_0718 799845 - 798517 - | TolC family type I secretion outer membrane protein TERM 578 799447 - 799462 + g 79 -8.2 -4.4261 | opp_overlap 799438, overlap 799438 799445 GACCAAGTCGATACT CGCCTG TATG CGGGCG TTTTCATGTTCGAAA Pmen_0719 801165 - 799849 - | HlyD family type I secretion membrane fusion protein Pmen_0720 802893 - 801175 - | type I secretion system ATPase TERM 579 801339 - 801359 + g 95 -7.5 -5.24129 | opp_overlap 801339 801337, overlap 801343 GGGTGATAACGAAGA TGGTGCAGC CGC GCTGCTTCA TTTTTTGTAGCGCGA TERM 580 801343 - 801355 + g 73 -9.1 -3.99236 | opp_overlap 801339 801337, overlap 801339 GATAACGAAGATGGT GCAGC CGC GCTGC TTCATTTTTTGTAGC TERM 581 802851 - 802837 - G 88 -7.8 -5.03994 | CGCCACAGAGAAAAA GCTCGC ACG GCAAGC GATCAGGGTGCGCTC Pmen_0721 808316 - 803022 - | hemolysin-type calcium-binding region TERM 582 805761 - 805778 + g 72 -7 -4.19678 | AGGAGTGCTGTTGAC CTGGGT CTCGCC ACCCAG TTTCTTGCCGTCTGC TERM 583 808358 - 808344 - R 71 -7.1 -4.25859 | TGCAATGGAAAATAA TCGCC GGGCT GGCGA AAATTCTGGCGTCTT Pmen_0722 811127 - 808572 - | hemolysin-type calcium-binding region Pmen_0723 812885 - 811263 - | response regulator receiver modulated diguanylate cyclase TERM 584 812974 - 813007 + H 75 -2.4 -4.96848 | overlap 812954 812956 812954 812977 812978 TCGATCAATTGACGG CGGTATTTCTGTCG AATAAG CGACAGAAAGGTGG TTTTTCTCTACCGGC Pmen_0724 813143 - 814201 + | hypothetical protein Pmen_0725 814201 - 814737 + | NUDIX hydrolase TERM 585 814761 - 814790 + F 82 -12.1 -3.69702 | opp_overlap 814730 814728, overlap 814764 CTTGCGGACGGCTGA TGGCCCTCTCCCG CATG CGGGAGAGGGTGG TTGTGTTAGCTCCTG TERM 586 814764 - 814787 + F 86 -18.2 -2.95007 | opp_overlap 814730 814728, overlap 814761 GCGGACGGCTGATGG CCCTCTCCCG CATG CGGGAGAGGG TGGTTGTGTTAGCTC Pmen_0726 815016 - 815450 + | translation initiation factor 1 (eIF-1/SUI1) Pmen_0727 815573 - 817486 + | arginine decarboxylase Pmen_0728 818003 - 817548 - | membrane protein-like protein TERM 587 817866 - 817812 - G 100 -21.5 -3.53224 | GACGCCCTTGCCAAA CCACAGCACCCGCGCCACCCCGGTG GCCAG CACCAGAACGGCGCAGATGCCGTAG GCCAGGTCGGTGAGC Pmen_0729 819387 - 818038 - | MATE efflux family protein TERM 588 822116 - 822098 - g 79 -2.2 -5.01732 | overlap 822099 AAGCGCCGGAAAAAA TGCGTCCG AAG CAGCCGCT GAAGGTCAAGGTCAG Pmen_0730 819463 - 824457 + | alpha-2-macroglobulin domain-containing protein TERM 589 824518 - 824460 - f 95 -14.1 -4.07885 | gap 2, opp_overlap 824444 824463 824464, overlap 824461 CAGGGGGCGCTAAAA GCTGTCCCGGATTGCATCCGGGCTACA GGAGTTG CGTAGCCCGGATGCAATCCGGGG-AT- TTTCGAGCACAAGGA TERM 590 824518 - 824461 - f 95 -20.1 -3.04517 | gap 1, opp_overlap 824444 824463 824464, overlap 824460 AGGGGGCGCTAAAAG CTGTCCCGGATTGCATCCGGGCTACA GGAGTTG CGTAGCCCGGATGCAATCCGGGG-AT TTTCGAGCACAAGGA TERM 591 824463 - 824517 + F 100 -26.7 -4.07568 | opp_overlap 824460 824461, overlap 824444 824464 GGGGCGCTAAAAGCT GTCCCGGATTGCATCCGGGCTAC AGGAGTTGC GTAGCCCGGATGCAATCCGGGGA TTTTCGAGCACAAGG TERM 592 824464 - 824516 + F 100 -30.2 -3.04398 | opp_overlap 824460 824461, overlap 824444 824463 GGGCGCTAAAAGCTG TCCCGGATTGCATCCGGGCTAC AGGAGTTGC GTAGCCCGGATGCAATCCGGGG ATTTTCGAGCACAAG TERM 593 824670 - 824681 + G 74 -5.8 -4.56914 | overlap 824667 TATGCAGGATACGCA GGCA CGAC TGCC TTTTCGTTTACCTGC Pmen_0731 824542 - 825072 + | hypothetical protein TERM 594 825078 - 825133 + F 100 -25 -3.41051 | gap 1, overlap 825079 TGGTGAATGAGGTAT TC-CCCGGATTGCATCCGGGCTACG CGGGATC TGTAGCCCGGATGCAATCCGGGAGC TTGTGCTGACCATGC TERM 595 825079 - 825132 + F 100 -28.5 -2.64416 | gap 1, overlap 825078 GGTGAATGAGGTATT C-CCCGGATTGCATCCGGGCTACG CGGGATC TGTAGCCCGGATGCAATCCGGGAG CTTGTGCTGACCATG Pmen_0732 825145 - 827469 + | penicillin-binding protein 1C Pmen_0733 827538 - 828305 + | amino acid ABC transporter periplasmic protein Pmen_0734 828453 - 830384 + | methyl-accepting chemotaxis sensory transducer Pmen_0735 831560 - 830433 - | diguanylate cyclase Pmen_0736 832171 - 831722 - | hypothetical protein Pmen_0737 832693 - 832208 - | GCN5-related N-acetyltransferase Pmen_0738 833264 - 832710 - | hypothetical protein Pmen_0739 833868 - 833287 - | hypothetical protein Pmen_0740 834693 - 833944 - | methyltransferase type 11 Pmen_0741 834995 - 834690 - | hypothetical protein Pmen_0742 835993 - 835136 - | dehydratase TERM 596 836282 - 836310 + G 78 -13.7 -3.55444 | overlap 836307 CTGGTGCGCGTTGGC CTGCCGCCCGGCG GGC TGCCGGCCGGCCG TTTCCCCCATGCGGC Pmen_0743 836183 - 837175 + | AraC family transcriptional regulator fabG 838669 - 837314 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 597 837460 - 837495 + g 79 -13.3 -3.64703 | gap 1, overlap 837480 TCCGTCGTCCGGCTT CGCGGATGCCCAGCGG AATGG CCGC-GGTCATCTGCG TTTCGATGAACCCCG Pmen_0745 838896 - 840173 + | acetyl-CoA acetyltransferase TERM 598 840232 - 840261 + F 100 -15.7 -5.40072 | gap 1, opp_overlap 840234, overlap 840234 GCAACTCCGTGAATT GAGGCGGCCTGCGC GAT GCGC-GGCCGCCTA TTTTTTTGCCCGGAC TERM 599 840259 - 840234 - f 85 -18.3 -2.52795 | gap 1, opp_overlap 840232 840234 AACTCCGTGAATTGA GGCGGCCTGCGC GAT GCGC-GGCCGCC TATTTTTTTGCCCGG TERM 600 840234 - 840259 + F 100 -18.3 -4.34482 | gap 1, opp_overlap 840234, overlap 840232 AACTCCGTGAATTGA GGCGGCCTGCGC GAT GCGC-GGCCGCC TATTTTTTTGCCCGG Pmen_0746 840571 - 842010 + | cytochrome bd ubiquinol oxidase, subunit I TERM 601 842205 - 842225 + G 74 -12.5 -3.60805 | overlap 842198 TGGCTGGTGCTCGGC GGCGCCGGG CTG TTCGGCGCC TTTCCGCTGGCCTAT Pmen_0747 842013 - 843020 + | cytochrome d ubiquinol oxidase, subunit II TERM 602 843297 - 843349 + G 70 -8.2 -3.97674 | gap 2, overlap 843298 CGCCAGTTCATGAGT GCGGCGGGGCTGGGC-A-CGCCGGGC TGA GGCCGGCGGTTGATCCGCCCGGCCGA TTGTTTCCATACTGC Pmen_0748 843174 - 843323 + | hypothetical protein Pmen_0749 843393 - 844835 + | peptidase U62, modulator of DNA gyrase TERM 603 845692 - 845738 + G 87 -18.7 -2.52464 | gap 1, overlap 845650 TGCCGAGGGGCCGCG CCAGGCGCTGCGTCTGGTCAGC CAGG GCCGGCCCGGCG-AGCGCCTGG TCAGTTCGCGCAGCG TERM 604 846102 - 846136 + G 70 -10.6 -3.61103 | overlap 846066 GCGCCCGGCAGACCG GCTCGATGGCGCTGCC GGG GGCATTGCTGTCGCGC TTTACCCTGACCTTG Pmen_0750 844835 - 846154 + | Zn-dependent protease-like protein Pmen_0751 847293 - 846160 - | 16S rRNA m(2)G 1207 methyltransferase Pmen_0752 847354 - 848130 + | oxidoreductase FAD/NAD(P)-binding subunit Pmen_0753 848242 - 848484 + | hypothetical protein Pmen_0754 848563 - 848841 + | hypothetical protein Pmen_0755 849375 - 848881 - | acetyltransferase-like protein TERM 605 849057 - 849091 + g 81 -7.7 -4.59773 | gap 1, overlap 849060 CGCCCATCAGTTGCT GCACCAGCG-CGCGGC CGAT GCCGCGGCGACGGTAC TTTTTCAGGATGAAC TERM 606 850088 - 850049 - g 74 -12.8 -3.53811 | gap 1, opp_overlap 850044 850057 CCCAGGTGCGCGAAA GCGCCGCCCTGCTGGTGCG CTT CGC-CAAGCAGAGCGGTAC CGCGGTCTTTCTGGT Pmen_0756 849469 - 850830 + | DNA repair protein RadA Pmen_0757 851544 - 851173 - | type IV pilus assembly PilZ Pmen_0758 851710 - 852216 + | hypothetical protein TERM 607 852335 - 852367 + T 86 -12.7 -3.97636 | opp_overlap 852339, overlap 852339 852342 GAAATCTACAAGGCA AAAAGAAGCCCGCCG AGT TGGCGGGCTTCTTCA TTTCTCGGTTGGGCT TERM 608 852339 - 852363 + T 100 -17.9 -3.63059 | opp_overlap 852339, overlap 852335 852342 TCTACAAGGCAAAAA GAAGCCCGCCG AGT TGGCGGGCTTC TTCATTTCTCGGTTG TERM 609 852363 - 852339 - T 100 -17.2 -4.78149 | opp_overlap 852339 852335 852342 TCTACAAGGCAAAAA GAAGCCCGCC GAGTT GGCGGGCTTC TTCATTTCTCGGTTG TERM 610 852342 - 852360 + T 91 -13.8 -3.93401 | opp_overlap 852339, overlap 852339 852335 ACAAGGCAAAAAGAA GCCCGCCG AGT TGGCGGGC TTCTTCATTTCTCGG glyA 853635 - 852382 - | serine hydroxymethyltransferase Pmen_0760 858045 - 853831 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 611 854804 - 854776 - G 73 -11 -3.71848 | gap 1, overlap 854797 854798 GGCGGTGACGAAGAA CTCGCGCCCTTCG AGCA CGAAGGG-GCGGG CCAGGCTGTCGAGAA TERM 612 857685 - 857657 - G 70 -10.1 -3.72695 | overlap 857661 AGCGCGCGGATGAAA GGCAGGTCCGGCG ATT CGCCGGCGCTGTC GGCCAACCGCTGACC Pmen_0761 858303 - 858061 - | hypothetical protein TERM 613 858149 - 858137 - G 75 -4.8 -4.57569 | GCATGCCTGCAAAAA TGGC CAAGT GCCA GCTTGTCCGACGAGC TERM 614 858318 - 858295 - G 81 -8.8 -4.56775 | AGGCTGGGTGAAAAA CCGCTGCATG CGGC CATGCGGCAG CGAAAACCGGCGCAA Pmen_0762 858465 - 860132 + | putative ABC transporter ATP-binding protein TERM 615 860170 - 860153 - T 100 -12.7 -5.46657 | opp_overlap 860153 CAGTGGAAGAAAAAA CGGAGCC TGCG GGCTCCG TTTTTCGTTGGCGGC TERM 616 860153 - 860170 + T 100 -12.7 -4.8622 | opp_overlap 860153 CAGTGGAAGAAAAAA CGGAGCC TGCG GGCTCCG TTTTTCGTTGGCGGC Pmen_0763 860561 - 860229 - | type IV pilus assembly PilZ Pmen_0764 862916 - 860571 - | hypothetical protein TERM 617 860675 - 860685 + g 76 -8.2 -4.24204 | CGGGGGTAACGATGC GGGC CAG GCCC TTTTCCATCTCGCTG TERM 618 863374 - 863404 + r 100 -21.3 -3.88291 | opp_overlap 863374 863381, overlap 863381 ACCCACCATATAGAA CGACAAAGCCCGC CTTGT GCGGGCTTTGTCG TTTCTGCGCCTCATA TERM 619 863404 - 863374 - R 100 -21.3 -3.6217 | opp_overlap 863374 863381, overlap 863381 ACCCACCATATAGAA CGACAAAGCCCGC CTTGT GCGGGCTTTGTCG TTTCTGCGCCTCATA TERM 620 863397 - 863381 - R 80 -10.8 -4.13 | opp_overlap 863374 863381, overlap 863374 ATATAGAACGACAAA GCCCGC CTTGT GCGGGC TTTGTCGTTTCTGCG TERM 621 863381 - 863397 + r 84 -10.8 -4.17701 | opp_overlap 863381 863374, overlap 863374 ATATAGAACGACAAA GCCCGC CTTGT GCGGGC TTTGTCGTTTCTGCG Pmen_0765 865081 - 863780 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 622 864303 - 864330 + g 71 -14.8 -2.54896 | opp_overlap 864300 864301, overlap 864300 864323 864323 GCCGGGATGAAATTG CCGTCGGCGGTC TTCA GGCCGTCGGCGG TCACTTCGCTGACGG TERM 623 864956 - 865009 + g 75 -7.3 -4.36914 | gap 1, overlap 864957 CAGGGGCTTCCAGAT GTGGGTGAGATTGGCGTCGACCAGGA TGA TCCGGGCTG-CGCCGCTCTTGCCCAG TTTTCTACCCAGACG Pmen_0766 865318 - 865145 - | hypothetical protein Pmen_0767 865891 - 865343 - | MOSC domain-containing protein Pmen_0768 866517 - 865888 - | hypothetical protein TERM 624 866249 - 866239 - G 76 -8.2 -4.18018 | overlap 866240 CTGGCTGAGCGAAAA GGCG CTG CGCC GACGCTCGAGTTCGG Pmen_0769 866644 - 867333 + | membrane protein-like protein Pmen_0770 867357 - 867656 + | hypothetical protein Pmen_0771 867902 - 867708 - | zinc-binding protein coaE 868507 - 867899 - | dephospho-CoA kinase TERM 625 868645 - 868670 + r 81 -13.2 -3.34398 | overlap 868643 GCGTACTGCCTGCGG CCGGCCCCGG TGCAAT CCGGGACCGG TATTTCAGAACCCGG Pmen_0773 869544 - 868675 - | prepilin peptidase TERM 626 869524 - 869506 - G 100 -11.7 -4.77173 | GGCGCATAAAACAAA GGCCAGC ACATG GCTGGCC AGAAGGTCGATGATG Pmen_0774 870762 - 869545 - | type II secretion system protein TERM 627 869806 - 869823 + g 83 -9.1 -4.33854 | GAAATTCAATTGCAT GCCGGTG GAAA CATCGGC TTTGATTTTGTTGGT TERM 628 870236 - 870255 + g 76 -6.4 -4.45765 | opp_overlap 870234 870232, overlap 870232 870231 GCGACGACAATTACC GCGATGGG GTAG TTCATCGC TTTCTTGATTTTCGC Pmen_0775 872468 - 870765 - | type IV-A pilus assembly ATPase PilB TERM 629 872297 - 872275 - G 95 -4.9 -5.47399 | gap 2, opp_overlap 872277, overlap 872276 872279 TTAAGGTCAAAAAAA GCCACGCCGAA TTG TTCGGCG-G-C TAATTCGGCCAGGGC Pmen_0776 874036 - 872735 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 630 873103 - 873119 + g 79 -2.9 -5.08601 | opp_overlap 873104, overlap 873104 GGTGCTCATCTGCAA ACAGCTG GAA CAGTTGC TTTTTGTTGGCGTCA TERM 631 873447 - 873458 + g 87 -7.2 -5.06414 | opp_overlap 873446 873447 AGCACATCGAGCAAG CGGG CCGG CCCG TTTTTGTTACGCACG TERM 632 874407 - 874420 + G 84 -6.7 -4.78077 | overlap 874411 GTCGTTGTCTGCGCC TGGTG AAAT CACCA TTTCTTTTGCTTCGG Pmen_0777 874162 - 874557 + | fimbrial protein pilin TERM 633 874586 - 874602 + T 100 -15.1 -5.71983 | opp_overlap 874586 CGTTCGCTCAAAAAA GCCCCGC TTT GCGGGGC TTTTTTTCTGCTTAG TERM 634 874602 - 874586 - T 100 -15.1 -5.00616 | opp_overlap 874586 CGTTCGCTCAAAAAA GCCCCGC TTT GCGGGGC TTTTTTTCTGCTTAG Pmen_0778 875634 - 874786 - | nicotinate-nucleotide pyrophosphorylase Pmen_0779 876061 - 878361 + | hypothetical protein Pmen_0780 878735 - 879286 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 635 879396 - 879423 + G 72 -12 -3.59202 | gap 1, overlap 879397 879399 GTTGCAGCGGCTGCA GCAGGGCAGCCTG CAA CAGGC-GCCCTGG TTGTGTCTGGCGGTG TERM 636 879397 - 879422 + G 75 -15.5 -2.752 | gap 1, overlap 879396 879399 TTGCAGCGGCTGCAG CAGGGCAGCCTG CAA CAGGC-GCCCTG GTTGTGTCTGGCGGT Pmen_0781 879289 - 880122 + | signaling modulator of AmpD, AmpE TERM 637 881238 - 881213 - g 75 -14 -3.28712 | overlap 881214 CGTCGCCGCGCAGAA CGGCCTCGGC GGTCTG GCCGAGGCCA GCCGGCAGACTCTCA TERM 638 881237 - 881214 - g 74 -15.3 -2.57132 | overlap 881213 GTCGCCGCGCAGAAC GGCCTCGGC GGTCTG GCCGAGGCC AGCCGGCAGACTCTC Pmen_0782 880464 - 882494 + | methyl-accepting chemotaxis sensory transducer Pmen_0783 883295 - 882516 - | TatD family hydrolase TERM 639 883666 - 883678 + G 75 -3.3 -4.82901 | overlap 883657 GCCTGAGCGGCTGGC TGCCG TGG CCGCA TTTTTCTGCCGAGCA Pmen_0784 883449 - 885491 + | AsmA family protein Pmen_0785 886560 - 885568 - | DNA-binding transcriptional regulator FruR TERM 640 886725 - 886750 + H 70 -10.3 -3.55444 | TTCCCCGCTCCGTGG CCGACGCGCAG CAGG CTGCGCGCAGG TTTCGCACCTACAAC TERM 641 887872 - 887827 - g 79 -16.8 -2.53015 | gap 1 AGATGCTGGAATTCA GCGCCGAGC-CCGGCATCGCC GATGT GGCGTTGCCGGCGCTGCGCGC GGCGCTCGCAGCCGG Pmen_0786 886785 - 889643 + | phosphoenolpyruvate--protein phosphotransferase Pmen_0787 889643 - 890563 + | 1-phosphofructokinase TERM 642 891554 - 891572 + G 79 -8.8 -4.3739 | overlap 891542 891555 891568 TGGGCGCCGGCTTTA TCGGCGGT ATC ATCGCCGG TTTTCTCGCCGGCTA TERM 643 892080 - 892122 + G 77 -9.8 -3.90588 | gap 1, overlap 892083 GCGGGTGATCCCGGC GAGCATCGCCGGCGGCGCC CTGACC GGCGC-GCTGTCGATGTAC TTTGGTTGCAAGCTG Pmen_0788 890575 - 892299 + | PTS system, fructose subfamily, IIC subunit TERM 644 892377 - 892352 - f 86 -18.3 -2.71011 | gap 1, overlap 892338 AGCGCCTGGGAAGTA GGGGC-GGCGGG TCA CCCGCCTGCCCC TTGGCGCCATCCCCC TERM 645 892437 - 892463 + G 73 -10.8 -3.65902 | opp_overlap 892426, overlap 892426 892438 TCAAGCTCTCGCGCA TCGCTGGCGC TTCTTCC GCGCCGGCGG TTTCGATCAGGTGCA TERM 646 894124 - 894086 - g 100 -21 -3.54459 | gap 1, opp_overlap 894107, overlap 894063 894064 CCAAGGTCGGCGAAA CCGGCGCC-GCGCCTGC TGCGAC GCCGGCGCCGGCGCCGG CGTTCGATATCGCCA TERM 647 894107 - 894126 + G 81 -16.4 -3.12351 | opp_overlap 894064 894086 CCGCGCCTGCTGCGA CGCCGGCG CCGG CGCCGGCG TTCGATATCGCCAAG Pmen_0789 892417 - 894603 + | hypothetical protein Pmen_0790 895544 - 894837 - | silent information regulator protein Sir2 Pmen_0791 895712 - 898132 + | quinoprotein glucose dehydrogenase TERM 648 898166 - 898134 - T 100 -18.5 -3.8505 | opp_overlap 898139 898142, overlap 898135 898139 AGGAAGATGAGTAAA CGGAACAAGGCCCGC AGA GCGGGCCTTGTTCAA TGTCAGTGGTGCTCA TERM 649 898165 - 898135 - T 88 -19.8 -2.90307 | opp_overlap 898139 898142, overlap 898134 898139 GGAAGATGAGTAAAC GGAACAAGGCCCGC AGA GCGGGCCTTGTTCA ATGTCAGTGGTGCTC TERM 650 898139 - 898161 + T 91 -19.2 -3.13728 | opp_overlap 898135 898134 898139, overlap 898142 GATGAGTAAACGGAA CAAGGCCCGC AGA GCGGGCCTTG TTCAATGTCAGTGGT TERM 651 898161 - 898139 - T 95 -19.2 -3.31415 | opp_overlap 898139 898142, overlap 898135 898134 GATGAGTAAACGGAA CAAGGCCCGC AGA GCGGGCCTTG TTCAATGTCAGTGGT TERM 652 898142 - 898158 + T 93 -15.1 -3.7104 | opp_overlap 898139 898135 898134, overlap 898139 GAGTAAACGGAACAA GGCCCGC AGA GCGGGCC TTGTTCAATGTCAGT prfC 899752 - 898169 - | peptide chain release factor 3 TERM 653 901028 - 901044 + G 75 -11.5 -3.71848 | overlap 901033 TGATGATGCTGGCCA CGGCGGC CAT GCCGCTG TTCTTCGTCACCGGC TERM 654 901113 - 901092 - g 91 -17.3 -3.67597 | TCGCCGACGCAAGAA GCGCGCAGC AGTG GCTGCGCGC AGTGCCATGAAAACG Pmen_0793 899989 - 902520 + | flavodoxin/nitric oxide synthase TERM 655 902551 - 902562 + F 78 -2.2 -5.03994 | ATGCGCGGGGTGAAG TTGC CGAA GCGA TTTTTATATATGAGA Pmen_0794 902611 - 903309 + | two component transcriptional regulator Pmen_0795 903306 - 904640 + | integral membrane sensor signal transduction histidine kinase Pmen_0796 904729 - 906678 + | TonB-dependent receptor TERM 656 907261 - 907271 + G 77 -6.8 -4.56597 | TGCCACAAGGCTCCG CACC CAA GGTG TTTTTGCACAGCCGC Pmen_0797 906678 - 907781 + | periplasmic binding protein Pmen_0798 907793 - 908824 + | transport system permease protein Pmen_0799 908821 - 909603 + | ABC transporter related Pmen_0800 909607 - 909885 + | hypothetical protein Pmen_0801 910266 - 911429 + | ornithine decarboxylase TERM 657 911505 - 911536 + F 93 -15.3 -3.85698 | gap 1, opp_overlap 911512, overlap 911509 GATGTCACGGTTGCT CGATCAACGCCCAC CTTGT GTGGGCGTTG-TCG TTTCTGCCGACCAGA TERM 658 911509 - 911533 + F 83 -15.8 -3.00946 | opp_overlap 911512, overlap 911505 TCACGGTTGCTCGAT CAACGCCCAC CTTGT GTGGGCGTTG TCGTTTCTGCCGACC Pmen_0802 911717 - 914011 + | TonB-dependent siderophore receptor TERM 659 914028 - 914054 + F 100 -20.2 -4.43477 | opp_overlap 914015 CACGCTGTGCCCAGA CGCCCCGATTGC AAC GCAGTCGGGGCG TTTTCATTGGGTGGC Pmen_0803 914148 - 914816 + | putative hydroxylase TERM 660 915382 - 915365 - g 71 -9.1 -3.85698 | gap 1 TCCGCCGTGCAGAAA GCGCC-GG CTA CCAGGCGC TGGTGCTGACCGTGG Pmen_0804 914842 - 916011 + | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 661 916819 - 916798 - g 80 -13.7 -3.66378 | GAGACTTCACCGAAA TCGGCGCCG GCCT CGGCACCGA CAACTACCACCGCCT Pmen_0805 916254 - 918449 + | TonB-dependent siderophore receptor TERM 662 918517 - 918484 - T 100 -25.5 -3.87869 | opp_overlap 918490, overlap 918490 GGAAGTCGCCAGAAA GCAAAACGCCAGCCC CAGG GGGCTGGCGTTTTGC ATTGCAGTGGCGTGG TERM 663 918490 - 918511 + T 100 -17.3 -4.2803 | opp_overlap 918484 918490 CGCCAGAAAGCAAAA CGCCAGCCC CAGG GGGCTGGCG TTTTGCATTGCAGTG TERM 664 918511 - 918490 - T 100 -17.3 -4.61873 | opp_overlap 918490, overlap 918484 CGCCAGAAAGCAAAA CGCCAGCCC CAGG GGGCTGGCG TTTTGCATTGCAGTG Pmen_0806 920765 - 918534 - | TonB-dependent receptor Pmen_0807 920995 - 921738 + | hypothetical protein Pmen_0808 922137 - 921838 - | hypothetical protein TERM 665 922172 - 922211 + r 72 -12.8 -3.05384 | gap 1, overlap 922175 TGCGCACCGGGTCTG CTGG-TGGCCGCCGCTCCG TCG CGTAGCGGCGGCAAGTCGG TTCAATAGGCCAGGG TERM 666 922175 - 922207 + r 72 -13.3 -2.54896 | overlap 922172 GCACCGGGTCTGCTG GTGGCCGCCGCTCCG TCG CGTAGCGGCGGCAAG TCGGTTCAATAGGCC Pmen_0809 922854 - 922213 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 667 923308 - 923328 + G 72 -4.5 -4.56597 | opp_overlap 923281, overlap 923310 CTCTTGAGCGCGCAT CCGGCGCTG AGC CTGCGTCTG TTTTTCCAGGACGAG Pmen_0810 922954 - 923841 + | LysR family transcriptional regulator Pmen_0811 923928 - 924815 + | protein of unknown function RIO1 Pmen_0812 925319 - 924888 - | MerR family transcriptional regulator Pmen_0813 925616 - 925356 - | hypothetical protein Pmen_0814 926057 - 925713 - | hypothetical protein Pmen_0815 927086 - 926745 - | hypothetical protein Pmen_0816 929539 - 927359 - | lipase, class 3 TERM 668 928914 - 928887 - G 75 -4.8 -4.60797 | opp_overlap 928910, overlap 928888 GGGGCATAGACAAAA GTGCTCATCACC GCTA GGTGATAGGCAT TCAGGGCGCAGAAGG Pmen_0817 930211 - 929546 - | hypothetical protein TERM 669 930000 - 929990 - G 76 -8.2 -4.24413 | overlap 929991 GCCATGAATAAACAA CCCG ACA CGGG CCAGACGCATTTCAC Pmen_0818 931029 - 930286 - | hypothetical protein TERM 670 930749 - 930739 - G 76 -8.2 -4.24413 | overlap 930740 GCCATGAATAAACAA CCCG ACA CGGG CCAGACGCATTTCAC Pmen_0819 931928 - 931026 - | hypothetical protein TERM 671 931244 - 931258 + g 75 -11.4 -3.73775 | TCAAATGAACGCTCT CCGCCA ACC TGGCGG TTTCATCGGGATACG Pmen_0820 934009 - 931925 - | Rhs element Vgr protein Pmen_0821 936515 - 934143 - | heavy metal translocating P-type ATPase Pmen_0822 936969 - 936580 - | hypothetical protein Pmen_0823 937054 - 937305 + | heavy metal transport/detoxification protein Pmen_0824 937975 - 937355 - | TetR family transcriptional regulator TERM 672 937777 - 937814 + g 74 -9.9 -3.79906 | overlap 937752 GCGGCTCCAGCGGCA GGCGCACCTGGTTGA GCATTTCG TGAAACAGGTGCGCC TTGTTCTGAAAGTGC TERM 673 937917 - 937944 + g 93 -11.2 -4.39828 | opp_overlap 937913, overlap 937918 937940 TCGAGAAACAACTGC TCCGCTGCGGCG AGGA TGGCGCAGCGGG TTTTCTCCGCATCTT TERM 674 937918 - 937943 + g 71 -12.5 -3.23174 | opp_overlap 937913, overlap 937917 937940 CGAGAAACAACTGCT CCGCTGCGGCG AGGA TGGCGCAGCGG GTTTTCTCCGCATCT TERM 675 938043 - 938077 + H 86 -14.3 -3.33671 | gap 1, overlap 938036 938045 TTACCCTGCCAGCTG GTGGCGCAGCGTGACC GTCC GGTC-CGTTGCGCCTC TTCTGCAGTGCGTGT TERM 676 938045 - 938075 + H 85 -15.5 -3.23572 | gap 1, overlap 938036 938043 ACCCTGCCAGCTGGT GGCGCAGCGTGACC GTCC GGTC-CGTTGCGCC TCTTCTGCAGTGCGT Pmen_0825 938114 - 939265 + | RND family efflux transporter MFP subunit TERM 677 940898 - 940924 + G 72 -13.8 -3.02144 | GCCTGCTGCTGTTCG GCGGCATGATCG CGC TGATCATGCTGC TGTTCGCACGGGTGC Pmen_0826 939271 - 942408 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 678 942414 - 942440 + F 76 -13.7 -3.05816 | gap 1, opp_overlap 942413 GGCGCATTGAGACAT GG-CGGGCCGCT ATCT GGCGGCCCGGCC TTCCGTCGAGCGTGC TERM 679 943541 - 943568 + G 76 -14.8 -3.19463 | CATGCAGTTCAGCGT GGCGGCCAGCGC CTCG GCGCTGGTGGCC TTCCTGCATGATGGC Pmen_0827 942501 - 943670 + | Bcr/CflA subfamily drug resistance transporter Pmen_0828 944540 - 943680 - | protein of unknown function, zinc metallopeptidase putative Pmen_0829 945014 - 944580 - | hypothetical protein Pmen_0830 945144 - 945527 + | hypothetical protein TERM 680 945523 - 945561 + T 73 -13.3 -2.71011 | gap 2 TGCGCGGCTTGTCAC GCTGAACCGTAGCCCGGAT TGC ATCCGGGCTACGG--CAGG TGCTTCAGCGCCGCT Pmen_0831 946654 - 945566 - | tRNA (uracil-5-)-methyltransferase TERM 681 946190 - 946237 + g 81 -8.4 -4.56597 | GCCGATCACCAGGCG CTGGCCGCGCGAGC-GGCCGAC CAGGCT GACGTTCAGCTCGC-TGGCCAG TTTTTCCGCCGCGGC TERM 682 946704 - 946669 - R 73 -10.3 -3.66803 | overlap 946670 TGGCAACACTCTAAA GCGGCGACGACCGGC TGGGCG GCCGGTCGTCGGTGG GAGGAGGGTCAGGCG TERM 683 946703 - 946670 - R 73 -13.8 -2.7976 | overlap 946669 GGCAACACTCTAAAG CGGCGACGACCGGC TGGGCG GCCGGTCGTCGGTG GGAGGAGGGTCAGGC Pmen_0832 948005 - 946713 - | xanthine/uracil/vitamin C permease TERM 684 948049 - 948038 - H 78 -4.4 -4.74801 | CAAGTGCACCAAAAA TGCT CAGA AGCA AGCAAAGCATATTCC Pmen_0833 948241 - 948792 + | DJ-1 family protein Pmen_0834 950001 - 948979 - | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada Pmen_0835 950161 - 953658 + | multi-sensor hybrid histidine kinase Pmen_0836 953693 - 954880 + | response regulator receiver protein dppF 955972 - 955001 - | dipeptide transporter ATP-binding subunit Pmen_0838 956946 - 955972 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 685 956216 - 956257 + g 82 -17.3 -2.81133 | gap 1, opp_overlap 956229 GTGTAGGGGTGGCTG GGCGCGTCGAACAGGGTCGG CAC CCGGCCCAGTTCCAC-CGCC TGTCCTGCATACATC Pmen_0839 957951 - 957049 - | binding-protein-dependent transport systems inner membrane component TERM 686 957614 - 957587 - G 89 -8.3 -5.02476 | AGACGCGGGAAAAAA CCGGCAGCCAG GCCCAG CAGGATGCCGG GGATCAGCGACAGCA TERM 687 957737 - 957724 - G 79 -4.5 -4.72272 | gap 1 GGTGCCGAGCAAAAA GC-GCC ACT GGCCGC CGTCCAGCCATACCG Pmen_0840 959061 - 958051 - | alkaline phosphatase Pmen_0841 960818 - 959223 - | extracellular solute-binding protein Pmen_0842 961559 - 960993 - | cupin 2 domain-containing protein TERM 688 961668 - 961684 + H 76 -6.7 -4.57341 | opp_overlap 961668 AGGCTTTGACCAAAA TTTAAGT AGA ACTTAAA TTTTTGCGACAAGTT TERM 689 961684 - 961668 - H 71 -6.7 -4.25283 | opp_overlap 961668 AGGCTTTGACCAAAA TTTAAGT AGA ACTTAAA TTTTTGCGACAAGTT TERM 690 962633 - 962617 - g 86 -6.5 -4.99435 | overlap 962619 TGGAACAAGGAAAAA GCCGC GCAGCAG GCGGC GTTCGAGGCCGCCAC Pmen_0843 961744 - 962973 + | peptidase M24 TERM 691 962987 - 963026 + T 73 -10.8 -3.66178 | gap 1 AACCGCGCGGAACCG GTGCCG-GAGCGCCG TCACCGGTTCC CGGCGCTCATGGCAC TTTCACCTTGGCGAA Pmen_0844 964613 - 963018 - | extracellular solute-binding protein TERM 692 963165 - 963149 - G 71 -12.3 -3.34398 | overlap 963147 CCTGCTCGTGAAAGA TCGCCAG GGC CTGGCGA TACAGTGCGGCGCGT TERM 693 964148 - 964158 + g 72 -6.8 -4.1899 | opp_overlap 964137 CGAAGCGCACGCGAT GCTC GTC GAGC TTTTCGATGCGCTCG TERM 694 964659 - 964638 - R 100 -17.3 -4.1399 | opp_overlap 964632 CGATCCAGATAGAAA CGGCGCACC CAAA GGTGCGCCG TCTGCCGTCAGTTGC Pmen_0845 966265 - 964667 - | extracellular solute-binding protein TERM 695 966478 - 966435 - R 78 -5.2 -4.75404 | opp_overlap 966437 966438 966440, overlap 966437 966445 AAATCGCAGGAAAAA GATGGCGAAACGCCGTTATC TGGC GATAACGGCGTTGCGTTGTT GCGGGGCGTGGTTCA TERM 696 966440 - 966473 + r 100 -18.3 -3.61715 | opp_overlap 966437 966435 966445, overlap 966438 966437 GCAGGAAAAAGATGG CGAAACGCCGTTATC TGGC GATAACGGCGTTGCG TTGTTGCGGGGCGTG TERM 697 966468 - 966445 - R 93 -15.4 -3.64192 | opp_overlap 966438 966437 966440, overlap 966437 966435 AAAAAGATGGCGAAA CGCCGTTATC TGGC GATAACGGCG TTGCGTTGTTGCGGG Pmen_0846 967204 - 966491 - | hypothetical protein TERM 698 968567 - 968583 + G 75 -13.7 -3.26449 | overlap 968561 CCAGGCCAGCGTGAC CCGTGCC GGC GGCACGG TTAAGTTGTATAACC Pmen_0847 967404 - 968657 + | integral membrane sensor signal transduction histidine kinase Pmen_0848 968673 - 969233 + | two component Fis family transcriptional regulator Pmen_0849 969399 - 970340 + | auxin efflux carrier Pmen_0850 970797 - 970414 - | 4-carboxymuconolactone decarboxylase Pmen_0851 971894 - 970800 - | CaCA family Na(+)/Ca(+) antiporter Pmen_0852 972408 - 971986 - | rare lipoprotein A TERM 699 972448 - 972431 - R 100 -14.1 -5.14563 | opp_overlap 972431 TTCTCCATGAAAAAA CGCCGGG GGAA CCCGGCG TTTTTCAGTAGCAAG TERM 700 972431 - 972448 + r 100 -14.1 -4.65895 | opp_overlap 972431 TTCTCCATGAAAAAA CGCCGGG GGAA CCCGGCG TTTTTCAGTAGCAAG gatB 973923 - 972478 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 975386 - 973935 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 975689 - 975402 - | aspartyl/glutamyl-tRNA amidotransferase subunit C Pmen_0856 975927 - 976964 + | rod shape-determining protein MreB TERM 701 976985 - 977013 + F 76 -13.2 -3.04322 | gap 1 CCGCTAGTGGCTCGC TGT-CGTGCCGCC TCCG GGCGGCACGCGCA TATTCGAGCATTGCA Pmen_0857 977097 - 978083 + | rod shape-determining protein MreC Pmen_0858 978083 - 978571 + | rod shape-determining protein MreD Pmen_0859 978621 - 979217 + | Maf-like protein TERM 702 980147 - 980132 - g 73 -9 -3.92324 | overlap 980136 GCGTCGAAGACGAAA TCCAGC GCGC GCTGGA GCGCAAGGTACCGCT Pmen_0860 979318 - 980775 + | RNAse G Pmen_0861 980793 - 984614 + | membrane protein-like protein TERM 703 984618 - 984606 - f 74 -6.2 -4.57341 | opp_overlap 984587, overlap 984593 AAGCCGTTCGAAAAA CCGC AATGA GCGG ACGGCTTGGCGTACT TERM 704 985447 - 985470 + G 86 -4.4 -5.18726 | opp_overlap 985448, overlap 985448 985449 GCCATCCGCCAACGC ATGCCGGTGC AGCA GCACCGCCGA TTTTTCTTGTCGGAC Pmen_0862 984652 - 985512 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pmen_0863 985515 - 986957 + | peptidase U62, modulator of DNA gyrase Pmen_0864 987549 - 987031 - | hypothetical protein Pmen_0865 987666 - 989012 + | peptidase U62, modulator of DNA gyrase TERM 705 989025 - 989055 + T 100 -16.3 -4.12942 | gap 1, opp_overlap 989025 989028 989031, overlap 989028 TGAGATGGGCAGAGA CG-ACAAGGCCACC CGCG GGTGGCCTTGTTCG TTTTGGAGGCTTTAC TERM 706 989055 - 989025 - T 81 -16.3 -2.89191 | gap 1, opp_overlap 989025 989028, overlap 989028 989031 TGAGATGGGCAGAGA CG-ACAAGGCCACC CGCG GGTGGCCTTGTTCG TTTTGGAGGCTTTAC TERM 707 989028 - 989051 + T 100 -16.8 -3.67175 | opp_overlap 989028 989025 989031, overlap 989025 GATGGGCAGAGACGA CAAGGCCACC CGCG GGTGGCCTTG TTCGTTTTGGAGGCT TERM 708 989051 - 989028 - T 84 -16.8 -2.69468 | opp_overlap 989025 989028, overlap 989025 989031 GATGGGCAGAGACGA CAAGGCCACC CGCG GGTGGCCTTG TTCGTTTTGGAGGCT TERM 709 989048 - 989031 - T 79 -12.7 -3.49777 | opp_overlap 989028 989025, overlap 989028 989025 GGGCAGAGACGACAA GGCCACC CGCG GGTGGCC TTGTTCGTTTTGGAG Pmen_0866 989339 - 989067 - | phosphotransferase system, phosphocarrier protein HPr Pmen_0867 990211 - 989354 - | hypothetical protein TERM 710 989487 - 989512 + g 73 -3.9 -4.59773 | gap 1, overlap 989485 989489 GTCACGTAGGCGCGG TTGCTGGCG-GC AAA GCGCGGCAGCCA TTTTTCCAGGTAGGC Pmen_0868 990678 - 990214 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 711 990613 - 990661 + g 75 -9.5 -4.14243 | gap 1, overlap 990615 TTCGAGCACGCGTTT CTTGCTGCCGCCCGGCACGTTC ACCAGG GAACG-GCCGGGGGTCAGGATG TTTTCAAGTCGGATC TERM 712 990615 - 990659 + g 73 -10.7 -3.6692 | gap 1, overlap 990613 CGAGCACGCGTTTCT TGCTGCCGCCCGGCACGTTC ACCAGG GAACG-GCCGGGGGTCAGGA TGTTTTCAAGTCGGA Pmen_0869 990999 - 990691 - | SSU ribosomal protein S30P / sigma 54 modulation protein Pmen_0870 992591 - 991098 - | RNA polymerase factor sigma-54 TERM 713 991215 - 991227 + g 74 -2.6 -4.75063 | ACCAGCGATCTTGCT GTCG CTCAA CGGC TTTTTCGCGTTTTCT TERM 714 992467 - 992482 + g 73 -9 -3.92592 | AGCATGGGGTTGGAT TCCAGG GCTT CCTGGA TTTCCTGTTGCAGGT Pmen_0871 993453 - 992728 - | ABC transporter related Pmen_0872 993998 - 993453 - | OstA family protein Pmen_0873 994551 - 993985 - | hypothetical protein Pmen_0874 995081 - 994560 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Pmen_0875 996055 - 995081 - | KpsF/GutQ family protein Pmen_0876 996301 - 997110 + | ABC transporter related Pmen_0877 997110 - 997907 + | hypothetical protein Pmen_0878 997907 - 998377 + | hypothetical protein Pmen_0879 998392 - 999021 + | toluene tolerance family protein Pmen_0880 999018 - 999323 + | anti-sigma-factor antagonist TERM 715 999482 - 999470 - g 77 -3.3 -4.93365 | overlap 999471 999472 CTGCAGAAGTAAAAA GCCTC CTA GAGGA AAAACTCCCGAATAC Pmen_0881 999448 - 999687 + | BolA family protein TERM 716 1000170 - 1000182 + G 84 -9.1 -4.45068 | opp_overlap 1000147 1000148 CGCCCGAGGGCGGCC TGCGC GGT GCGCA TTTCTTCTTCGACGT Pmen_0882 999710 - 1000975 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 1001039 - 1001674 + | ATP phosphoribosyltransferase catalytic subunit hisD 1001798 - 1003108 + | histidinol dehydrogenase TERM 717 1003162 - 1003114 - f 77 -14.6 -2.79133 | opp_overlap 1003115, overlap 1003103 CAAGCCCTGAGGATA GGGTGCGCCTTGTGCACC TTGTGAATGTTTT GGTGCGCACGGCGCACCC TACGGGATCACGCTT TERM 718 1003115 - 1003131 + F 70 -10.1 -3.47387 | opp_overlap 1003103 1003114 AAGCCCTGAGGATAG GGTGCGC CTT GTGCACC TTGTGAATGTTTTGG Pmen_0885 1003239 - 1004291 + | histidinol-phosphate aminotransferase TERM 719 1004335 - 1004310 - T 100 -11.8 -5.00616 | opp_overlap 1004310 GGCGGGTCGAAAAAA GCCGGTGGCG TGTCAG CGTCACCGGC TTTTTTCATGGCACG TERM 720 1004310 - 1004335 + T 100 -14.7 -5.14563 | opp_overlap 1004310 GGCGGGTCGAAAAAA GCCGGTGGCGT GTCA GCGTCACCGGC TTTTTTCATGGCACG Pmen_0886 1005080 - 1004361 - | hypothetical protein TERM 721 1004820 - 1004837 + g 76 -8.3 -4.1673 | GCCGTTGTCCAGTGC CACGCCG AGTA CGGCGGG TTTCTTCAAGGGTTG Pmen_0887 1007172 - 1005094 - | TonB-dependent siderophore receptor Pmen_0888 1008401 - 1007259 - | 2-alkenal reductase Pmen_0889 1008513 - 1009271 + | hypothetical protein Pmen_0890 1009404 - 1010321 + | sulfate adenylyltransferase subunit 2 TERM 722 1010549 - 1010529 - g 89 -11.1 -4.1822 | CGCGACTCGAAGAAA GTCGGCACC ACC GGTGACGAC ATCGATCTGGCGCTG Pmen_0891 1010334 - 1012229 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein TERM 723 1012270 - 1012251 - T 100 -12.1 -4.4078 | opp_overlap 1012251 TGCGCTGAACGAAAA GCCCCGC CCTCGT GCGGGGC TTTTTCATTCCTGGC TERM 724 1012251 - 1012270 + T 100 -12.1 -4.90266 | opp_overlap 1012251 TGCGCTGAACGAAAA GCCCCGC CCTCGT GCGGGGC TTTTTCATTCCTGGC TERM 725 1012314 - 1012344 + T 82 -11 -3.91897 | opp_overlap 1012320, overlap 1012317 GCGAACTTTGCCCAA CAAAAAGCCCCGCC AAT GGCGGGGCTCGGTG TTTCTGGCTGACGGG TERM 726 1012338 - 1012320 - T 100 -17.4 -5.06414 | opp_overlap 1012317 1012314 TTTGCCCAACAAAAA GCCCCGCC AAT GGCGGGGC TCGGTGTTTCTGGCT Pmen_0892 1012791 - 1012360 - | hypothetical protein Pmen_0893 1012920 - 1013552 + | alpha/beta fold family hydrolase-like protein Pmen_0894 1013687 - 1015033 + | tryptophanyl-tRNA synthetase TERM 727 1015059 - 1015035 - f 89 -18.7 -3.09516 | opp_overlap 1015031 CGCCGCAGGAGTGAA GTAGCCCGGAT GCA ATCCGGGCTAC GGCCATGATTGCCAA TERM 728 1015079 - 1015106 + F 100 -20.6 -4.8622 | opp_overlap 1015079 ATGATTGCCAACCAA CGGGGGCGTCGC TAAA GTGACGCCCCCG TTTTTACTTGCCCGG TERM 729 1015106 - 1015079 - f 95 -18.4 -3.35073 | opp_overlap 1015079 ATGATTGCCAACCAA CGGGGGCGTCGC TAAA GTGACGCCCCCG TTTTTACTTGCCCGG Pmen_0895 1015132 - 1016226 + | AFG1 family ATPase TERM 730 1016241 - 1016273 + T 86 -18.6 -2.81464 | opp_overlap 1016241 1016248, overlap 1016248 ACAACTGCCGAACCA CGGAAAAGGCGACC CGAGA GGTCGCCTTTTTCG TGTCCTGGGTGGTGC TERM 731 1016273 - 1016241 - T 84 -17.1 -2.72558 | opp_overlap 1016241 1016248, overlap 1016248 ACAACTGCCGAACCA CGGAAAAGGCGACCC GAG AGGTCGCCTTTTTCG TGTCCTGGGTGGTGC TERM 732 1016266 - 1016248 - T 95 -12.4 -4.23892 | opp_overlap 1016241 1016248, overlap 1016241 CCGAACCACGGAAAA GGCGACCC GAG AGGTCGCC TTTTTCGTGTCCTGG TERM 733 1016248 - 1016266 + T 100 -11.7 -4.82667 | opp_overlap 1016248 1016241, overlap 1016241 CCGAACCACGGAAAA GGCGACC CGAGA GGTCGCC TTTTTCGTGTCCTGG Pmen_0896 1017348 - 1016386 - | hypothetical protein TERM 734 1017405 - 1017434 + r 70 -10.7 -3.55444 | gap 1, opp_overlap 1017390 GGGCGCTCAGGGGAT GCGCCAACCTAACC AAG GGT-GGGCTGGCGC TTTGCCGGCTAGCGG Pmen_0897 1018484 - 1017477 - | transcriptional regulator TERM 735 1019154 - 1019176 + G 76 -14.8 -3.17051 | opp_overlap 1019144, overlap 1019152 1019174 CAAGACCGACCCCAA GGCCGGTGCC AAG GGCACCAGCC TGTTCCTGGTGGAGG Pmen_0898 1018627 - 1019766 + | acyl-CoA dehydrogenase domain-containing protein Pmen_0899 1019838 - 1020551 + | endonuclease V Pmen_0900 1021585 - 1020548 - | aldo/keto reductase rplM 1021834 - 1022262 + | 50S ribosomal protein L13 TERM 736 1022311 - 1022294 - g 72 -6.9 -4.18018 | overlap 1022297 GTCGGCGACTCAAAA CTACGGC ACTG GCCGTCG CAAGACCGCAACCGC rpsI 1022277 - 1022669 + | 30S ribosomal protein S9 TERM 737 1022716 - 1022690 - f 89 -13.1 -4.07568 | gap 1, opp_overlap 1022674 1022690 TGGCGCTTTCGAAAA CGCCCAGTTTCC TTAC GGAA-CTGGGCG TTTTTTATGGGCAAG TERM 738 1022690 - 1022716 + F 100 -14.5 -5.24129 | opp_overlap 1022690, overlap 1022674 TGGCGCTTTCGAAAA CGCCCAGTTTC CTTAC GGAACTGGGCG TTTTTTATGGGCAAG TERM 739 1022764 - 1022739 - f 88 -7.5 -4.89477 | gap 1, overlap 1022740 TGGGCAAGAAGAAAA GCTGCGACAACG TGC CGCAGTCGC-GC AAGCCGCGCCCGACA TERM 740 1022758 - 1022740 - f 74 -11 -3.52963 | overlap 1022739 GGGCAAGAAGAAAAG CTGCGACA ACG TGCCGCAG TCGCGCAAGCCGCGC Pmen_0903 1022923 - 1023516 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit Pmen_0904 1023516 - 1024727 + | cytochrome b/b6 domain-containing protein Pmen_0905 1024727 - 1025506 + | cytochrome c1-like protein TERM 741 1025527 - 1025552 + F 100 -21.9 -4.85599 | opp_overlap 1025527 TCACCTGTCGCAGAA CCTGCGCGCCC TGAT GGGCGCGCAGG TTTTTGTGCCCTACC TERM 742 1025552 - 1025527 - f 100 -21.9 -3.29144 | opp_overlap 1025527 TCACCTGTCGCAGAA CCTGCGCGCCC TGAT GGGCGCGCAGG TTTTTGTGCCCTACC TERM 743 1025614 - 1025625 + F 89 -4.4 -5.1634 | opp_overlap 1025614, overlap 1025608 CAGCGACGTCAAAAA TTGC CCCG GCAA TTTTTCTGTGTTTCT TERM 744 1025625 - 1025614 - f 73 -4.4 -4.62783 | opp_overlap 1025614 1025608 CAGCGACGTCAAAAA TTGC CCCG GCAA TTTTTCTGTGTTTCT TERM 745 1025669 - 1025656 - f 95 -3.8 -5.68023 | overlap 1025660 GGATAATCAAAAAAA GCGA GGAGGA TCGC CATGGCGGTGACCAA Pmen_0906 1025671 - 1026288 + | glutathione S-transferase domain-containing protein Pmen_0907 1026303 - 1026716 + | ClpXP protease specificity-enhancing factor TERM 746 1026763 - 1026744 - T 100 -12.8 -4.51174 | opp_overlap 1026744, overlap 1026739 CGATCAGAACGAAAA CGGGCGCC CCAG AGCGCCCG TTTTTACTTGCAGCC TERM 747 1026744 - 1026763 + T 100 -12.1 -4.8622 | opp_overlap 1026739 1026744 CGATCAGAACGAAAA CGGGCGC CCCAGA GCGCCCG TTTTTACTTGCAGCC Pmen_0908 1027330 - 1026797 - | transport-associated gmhA 1027920 - 1027327 - | phosphoheptose isomerase Pmen_0910 1028305 - 1027946 - | hypothetical protein Pmen_0911 1030110 - 1028302 - | LppC family lipoprotein Pmen_0912 1030200 - 1031099 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 748 1031399 - 1031381 - f 79 -8.8 -4.14392 | overlap 1031382 CGGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCACGGCTGGCAACA TERM 749 1031641 - 1031628 - f 80 -3.9 -5.1287 | CTGATACCGAAAAAA TCTTA CTCT TAAGA AACTACTTTAACTTC TERM 750 1031748 - 1031758 + F 81 -5.4 -4.78149 | TTCGCTAAATCTCCG TCCT GTA AGGA TTTTTCCCTTCTGGC Pmen_0913 1031884 - 1032339 + | cell division protein MraZ TERM 751 1032546 - 1032563 + G 85 -14.1 -4.1021 | opp_overlap 1032543 ACCGGGGAAGCATTG GCGGCCG AAGA CGGCCGC TTTGTCGTTGTACAG mraW 1032342 - 1033286 + | S-adenosyl-methyltransferase MraW Pmen_0915 1033283 - 1033576 + | cell division protein FtsL Pmen_0916 1033573 - 1035300 + | peptidoglycan synthetase FtsI murE 1035300 - 1036763 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 752 1038059 - 1038106 + G 71 -14.2 -2.87881 | gap 1, opp_overlap 1038058 1038057, overlap 1038068 CACTACTAATCAAGG GTTCACGCAGCGCTGCCATGGAC AAG GTC-GTGGCGGCGCTGTGTGACG TATCTGGGGAGATTC Pmen_0918 1036756 - 1038126 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 1038127 - 1039209 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 1039216 - 1040562 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Pmen_0921 1040562 - 1041770 + | cell division protein FtsW murG 1041760 - 1042830 + | N-acetylglucosaminyl transferase murC 1042823 - 1044265 + | UDP-N-acetylmuramate--L-alanine ligase ddl 1044262 - 1045203 + | D-alanine--D-alanine ligase TERM 753 1045944 - 1045928 - g 81 -3.5 -5.00884 | overlap 1045929 ACGTGGTGGAAAAAA TGCGTCG TTT CGCCGCC ATCTATGAGCGGGAA TERM 754 1045987 - 1045973 - g 70 -11.4 -3.36326 | overlap 1045971 1045969 AACTGAAAGAACAGA GCGCGA ACA TCGCGC GCATCGACCTGCGTT Pmen_0925 1045207 - 1046073 + | polypeptide-transport-associated domain-containing protein Pmen_0926 1046089 - 1047336 + | cell division protein FtsA Pmen_0927 1047379 - 1048572 + | cell division protein FtsZ lpxC 1048684 - 1049595 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 755 1049623 - 1049640 + T 100 -12.7 -5.28778 | opp_overlap 1049623 1049619 TCCAGATGCAATTGA GGCCACC TTCG GGTGGCC TTTTTTATGGCTGCT Pmen_0929 1050185 - 1049730 - | hypothetical protein TERM 756 1050080 - 1050119 + g 70 -10.6 -3.55622 | gap 1, opp_overlap 1050080 1050079 1050077, overlap 1050082 GGCTTTCGACAAGAC GCTGCAGGTTGGACAGGCG TTG CGCCTGACCGAACAGC-GC TTTCAGGGGCTTGGC TERM 757 1050571 - 1050604 + G 81 -7.4 -4.66163 | gap 1, opp_overlap 1050576, overlap 1050572 TGGGTGAGCGTCTGA CCGAACTGGCCGAGC TGGAC GC-CGGCGAGTTCGA TTTTTCCCTGAGCGT Pmen_0930 1050264 - 1051184 + | peptidase M23B TERM 758 1051281 - 1051235 - f 89 -18.6 -3.05384 | overlap 1051239 TTCGCCCCCATCTAA CGGAGCACGCTGCGCCTGGCTC GCC GAGGCAGGCGCTGCCTGCGCCA TCACGCGGTAGCAAT TERM 759 1051277 - 1051239 - f 88 -18.8 -2.54896 | overlap 1051235 CCCCCATCTAACGGA GCACGCTGCGCCTGGCTC GCC GAGGCAGGCGCTGCCTGC GCCATCACGCGGTAG TERM 760 1051934 - 1051920 - g 71 -2.8 -4.63218 | overlap 1051921 GCCGCCGGAAGAAAA GCGT GCCGCCT ACGC TGCCGACATCACCTA TERM 761 1052862 - 1052841 - g 76 -5.9 -4.48987 | gap 1, overlap 1052843 GCTGCAGAAGGAAAA GATCGAGCAC AAG GTGCTCAA-C GCCAAGTACCACGAC TERM 762 1052861 - 1052843 - g 71 -9.6 -3.85296 | overlap 1052841 TGCAGAAGGAAAAGA TCGAGCAC AAG GTGCTCAA CGCCAAGTACCACGA secA 1051339 - 1054158 + | preprotein translocase subunit SecA TERM 763 1054224 - 1054251 + F 100 -19.2 -4.24002 | gap 1, opp_overlap 1054224 CCTGCGCCCTGACAA CGCCGCGA-CGGC CCT GCCGCTCGCGGCG TTTTACCATTTCACC TERM 764 1054251 - 1054224 - f 95 -19.2 -3.28712 | gap 1, opp_overlap 1054224 CCTGCGCCCTGACAA CGCCGCGA-CGGC CCT GCCGCTCGCGGCG TTTTACCATTTCACC argJ 1054310 - 1055527 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 765 1055548 - 1055581 + F 100 -19.7 -3.92592 | TTGGGCTTTGCACTA TTCCCGCGCCTCATG CCCC CATGACGCGCGGGAA TTTGCTATTCGGGGT Pmen_0933 1055658 - 1056290 + | glutathione S-transferase domain-containing protein Pmen_0934 1056287 - 1057228 + | hypothetical protein Pmen_0935 1057863 - 1057288 - | ATP:cob(I)alamin adenosyltransferase Pmen_0936 1059882 - 1057867 - | multi-sensor signal transduction histidine kinase TERM 766 1059523 - 1059555 + g 71 -9.1 -3.86015 | GGTTTCGCGCCAGTG CTGCAGCTGGCTCAG CTG TTGCGGTAGCTGCAG TTTCTCGCCGCGCTG Pmen_0937 1060900 - 1059989 - | 2-dehydropantoate 2-reductase TERM 767 1060568 - 1060538 - G 75 -9.7 -4.05033 | gap 1, overlap 1060541 GGTACTGGAGAGAAA CAGGCAGCG-CTGC CCGG GCAGACGCTGCGCG ACGCCATCCTGGCTG Pmen_0938 1061859 - 1060897 - | response regulator receiver modulated diguanylate cyclase Pmen_0939 1061998 - 1062477 + | nucleotide-binding protein TERM 768 1062526 - 1062547 + F 100 -15.9 -4.12738 | CTGATAGCATTCTGA CCGCCATGG CATG CCATGGCGG TTTCGTTTCATGTAC Pmen_0940 1062581 - 1063408 + | MscS mechanosensitive ion channel TERM 769 1063422 - 1063453 + T 75 -13.9 -2.89564 | gap 1, opp_overlap 1063428, overlap 1063428 GAGCTTCGCTGCAAC G-AAAAAGCCCCGG CAGGT CCGGGGCTTTTTGC TGTCTGGCGTCAGGC TERM 770 1063446 - 1063428 - T 100 -13.1 -4.8622 | opp_overlap 1063422 1063428 CGCTGCAACGAAAAA GCCCCGG CAGGT CCGGGGC TTTTTGCTGTCTGGC TERM 771 1063428 - 1063446 + T 100 -13.1 -4.84527 | opp_overlap 1063428, overlap 1063422 CGCTGCAACGAAAAA GCCCCGG CAGGT CCGGGGC TTTTTGCTGTCTGGC Pmen_0941 1065259 - 1063463 - | hypothetical protein Pmen_0942 1065677 - 1065303 - | methylated-DNA-(protein)-cysteine S-methyltransferase Pmen_0943 1065694 - 1066686 + | hypothetical protein Pmen_0944 1066837 - 1067850 + | hypothetical protein TERM 772 1067904 - 1067874 - T 73 -14.1 -2.71712 | opp_overlap 1067879, overlap 1067879 GTTGGTCGCTGAAAT GAAAAGCCCGCGA TTCAC TCGCGGGCTTTTT CGTTGCAGCAGGCTC TERM 773 1067899 - 1067879 - T 100 -14 -4.54727 | opp_overlap 1067879, overlap 1067874 TCGCTGAAATGAAAA GCCCGCGA TTCAC TCGCGGGC TTTTTCGTTGCAGCA TERM 774 1067879 - 1067899 + T 100 -14 -4.8622 | opp_overlap 1067874 1067879 TCGCTGAAATGAAAA GCCCGCGA TTCAC TCGCGGGC TTTTTCGTTGCAGCA Pmen_0945 1069180 - 1067918 - | uracil-xanthine permease upp 1069821 - 1069183 - | uracil phosphoribosyltransferase TERM 775 1069966 - 1069987 + H 75 -2.2 -4.87133 | CTTGGCAAGCGCCCT GCGGGT CTGTACCTTT GCCCGC TTTTATTTGACGGGT Pmen_0947 1070056 - 1070613 + | hypoxanthine-guanine phosphoribosyltransferase Pmen_0948 1072425 - 1070686 - | putative sulfate transporter YchM TERM 776 1071420 - 1071391 - G 78 -9.9 -4.09685 | gap 1, overlap 1071374 CGCCACTGGCGAAAA CGCGCCGGCGCGCA CAT TG-GCGGCGGTGCG GGCGATGGCGGCAGT Pmen_0949 1072598 - 1072885 + | hypothetical protein TERM 777 1072905 - 1072932 + T 100 -9.9 -5.26918 | gap 1, opp_overlap 1072905, overlap 1072877 CGCCGGCGGCAAAAA TGCCCGCGTTCC GTTAA GGAG-GCGGGCA TTTTTTATGGCCTGT TERM 778 1072932 - 1072905 - T 79 -7.7 -4.56597 | gap 1, opp_overlap 1072877 1072905 CGCCGGCGGCAAAAA TGCCCGCGTTCC GTTAA GGAG-GCGGGCA TTTTTTATGGCCTGT TERM 779 1072991 - 1072975 - T 100 -10.8 -5.4505 | opp_overlap 1072975 CGGGGCAATAAAAAA CCGGCC TCAAG GGCCGG TTTTTTCAAGAACCT TERM 780 1072975 - 1072991 + T 100 -11.5 -5.00884 | opp_overlap 1072975 CGGGGCAATAAAAAA CCGGCCT CAA GGGCCGG TTTTTTCAAGAACCT rpsT 1073292 - 1073014 - | 30S ribosomal protein S20 TERM 781 1073059 - 1073079 + g 74 -5.3 -4.52415 | GATGTGCGCGTTCAG GCGGCTCTT GTG ACGAGCGGC TTTGTTCTTGTGGAT Pmen_0951 1073484 - 1075025 + | integral membrane protein MviN TERM 782 1075700 - 1075730 + G 72 -11.9 -3.59979 | gap 2, overlap 1075719 GGCCGATGGCGATTT CGAGCTGGCCGAAGC CTT GCT-CGGCCGGC-CG TTTCGCATCGCCGGG Pmen_0952 1075170 - 1076120 + | bifunctional riboflavin kinase/FMN adenylyltransferase ileS 1076117 - 1078948 + | isoleucyl-tRNA synthetase lspA 1078941 - 1079450 + | lipoprotein signal peptidase Pmen_0955 1079447 - 1079884 + | peptidylprolyl isomerase, FKBP-type TERM 783 1079931 - 1079965 + F 86 -13.6 -3.55444 | overlap 1079933 1079935 AGTCGCGAAGCTCTT GTTGCAGCCTGCGC TTGTCCC GCGCAGGCTGTATC TTTCCGGGATCGCCC TERM 784 1079933 - 1079963 + F 86 -14.8 -3.35597 | overlap 1079931 1079935 TCGCGAAGCTCTTGT TGCAGCCTGCGC TTGTCCC GCGCAGGCTGTA TCTTTCCGGGATCGC TERM 785 1079935 - 1079961 + F 82 -15.2 -3.24708 | overlap 1079933 1079931 GCGAAGCTCTTGTTG CAGCCTGCGC TTGTCCC GCGCAGGCTG TATCTTTCCGGGATC ispH 1080023 - 1080967 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 786 1081078 - 1081041 - T 100 -14.9 -4.4959 | opp_overlap 1081046, overlap 1081044 1081046 CTCAACGAATCAAAA TAAGACGCCCCGGTCTC CCTA GAGACCGGAGCGTTTTT TCTACGTCATGTCAA TERM 787 1081075 - 1081044 - T 100 -16.6 -4.34912 | opp_overlap 1081046, overlap 1081041 1081046 AACGAATCAAAATAA GACGCCCCGGTCTC CCTA GAGACCGGAGCGTT TTTTCTACGTCATGT TERM 788 1081073 - 1081046 - T 100 -19.2 -3.75762 | opp_overlap 1081046, overlap 1081044 1081041 CGAATCAAAATAAGA CGCCCCGGTCTC CCTA GAGACCGGAGCG TTTTTTCTACGTCAT TERM 789 1081046 - 1081073 + T 100 -17 -5.28778 | opp_overlap 1081046 1081044 1081041 CGAATCAAAATAAGA CGCCCCGGTCTC CCTA GAGACCGGAGCG TTTTTTCTACGTCAT Pmen_0957 1081515 - 1081090 - | Tfp pilus assembly protein PilE-like protein Pmen_0958 1085201 - 1081518 - | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein TERM 790 1084173 - 1084143 - G 70 -8.3 -3.90744 | gap 1, opp_overlap 1084161, overlap 1084144 GGCGGTGGTAAAGAA CTCACCAGC-GCGC TTTA GCGCCGCTGGTAAC GGAGTGCCTTGGTTG Pmen_0959 1085860 - 1085213 - | Tfp pilus assembly protein PilX-like protein Pmen_0960 1086705 - 1085857 - | Tfp pilus assembly protein PilW-like protein TERM 791 1086397 - 1086379 - G 70 -11.7 -3.36505 | ATAGCGGATGCAGAA CCCCACG CCGAC CGTGGGG TTGAGACCCGTAGCA TERM 792 1086664 - 1086637 - G 75 -9.2 -4.1021 | gap 1, overlap 1086630 GCCGATAATCAGAAA GCTGCTGAT-TGC GAG GCTGATCAGCAGC TCGATCATCGACAGC Pmen_0961 1087262 - 1086702 - | type IV pilus modification protein PilV Pmen_0962 1087759 - 1087271 - | Tfp pilus assembly protein FimT-like protein Pmen_0963 1088410 - 1087901 - | Tfp pilus assembly protein FimT-like protein TERM 793 1088279 - 1088290 + g 74 -5.8 -4.49316 | overlap 1088278 AAACAGCTTTTCACG CAGC ATCT GCTG TTTATTGTTGGTGAT Pmen_0964 1088508 - 1089593 + | glycine oxidase ThiO Pmen_0965 1090996 - 1089656 - | two-component response regulator PilR Pmen_0966 1092591 - 1090999 - | sensor protein PilS Pmen_0967 1092823 - 1092581 - | hypothetical protein TERM 794 1092816 - 1092832 + g 74 -2.1 -4.71223 | opp_overlap 1092817, overlap 1092817 AACAGCAGGCGAAAC AGGCCCA TGG TGTGCCC TTTTATCTGTTATCC TERM 795 1093014 - 1092997 - R 100 -12.7 -5.24129 | opp_overlap 1092997 GGCGGCGACAAAAAA GGGAGGC CGTG GCCTCCC TTTTCGCAGTGACGC TERM 796 1092997 - 1093014 + r 89 -12.7 -4.11216 | opp_overlap 1092997 GGCGGCGACAAAAAA GGGAGGC CGTG GCCTCCC TTTTCGCAGTGACGC Pmen_0968 1094027 - 1093035 - | DNA uptake lipoprotein-like protein Pmen_0969 1094369 - 1095343 + | ribosomal large subunit pseudouridine synthase D Pmen_0970 1095340 - 1096071 + | hypothetical protein TERM 797 1096077 - 1096135 + F 89 -16.1 -3.40382 | gap 2, overlap 1096077 1096116 GCAGGGCTGAGCTGG -GAGTAGGGCGGGTGTGACCCGCC-GC ACGCATG GCTGGCGGGTTGCACCCGCCCTACGGG TTCTGACCTTTAATC TERM 798 1096077 - 1096134 + F 100 -22.1 -2.63747 | gap 1, overlap 1096077 1096116 GCAGGGCTGAGCTGG GAGTAGGGCGGGTGTGACCCGCC-GC ACGCATG GCTGGCGGGTTGCACCCGCCCTACGG GTTCTGACCTTTAAT Pmen_0971 1096193 - 1096795 + | TetR family transcriptional regulator Pmen_0972 1096822 - 1097931 + | NADH:flavin oxidoreductase/NADH oxidase Pmen_0973 1097978 - 1098379 + | hypothetical protein Pmen_0974 1099635 - 1098433 - | glycosyl transferase, group 1 Pmen_0975 1099807 - 1100916 + | hypothetical protein Pmen_0976 1101653 - 1100913 - | putative sulfate transport protein CysZ TERM 799 1101359 - 1101349 - G 75 -6.8 -4.36914 | TTCTCGGCGAGAAAA CCGT TGA ACGG CGCGGCGATGATGTT TERM 800 1101477 - 1101453 - G 79 -11.3 -3.89822 | TATGTACTGCAGAAA GCTCAGCCAGC TCG GCAGGCTGGGC ATGAAGGTATCGACC Pmen_0977 1103698 - 1101725 - | diguanylate cyclase with PAS/PAC sensor Pmen_0978 1103939 - 1104886 + | thioredoxin reductase TERM 801 1104907 - 1104894 - T 84 -3.8 -5.24129 | overlap 1104895 1104896 GGGTTTGAGAAAAAA CCTG TGAGCG CAGG GCGCCTCCCACAGAT TERM 802 1104963 - 1104977 + T 71 -7 -4.2704 | overlap 1104964 CCGCGTCGGGCGGTC AGGCCG GTT CGGCCG TTTCTTCCTGCTGGG Pmen_0979 1107792 - 1104961 - | hypothetical protein Pmen_0980 1108481 - 1107789 - | hypothetical protein TERM 803 1108424 - 1108459 + g 70 -4 -4.44046 | gap 1, opp_overlap 1108430, overlap 1108427 AGATGTGGTAGCCCT TGA-ACAGGTCGCGG AAAGCGG CCGCGAGCTGGGTCA TTTCTTTCAGATCGA Pmen_0981 1109807 - 1108566 - | hypothetical protein Pmen_0982 1110033 - 1110638 + | hypothetical protein Pmen_0983 1110830 - 1111858 + | hypothetical protein Pmen_0984 1111861 - 1112922 + | hypothetical protein TERM 804 1113394 - 1113382 - g 77 -10.5 -3.9461 | overlap 1113383 CGGCTGGAAGAACAA GGCGC TGA GCGCC GCCAATGGCGGCGAC Pmen_0985 1112909 - 1113499 + | hypothetical protein TERM 805 1115359 - 1115334 - g 73 -14 -3.15544 | gap 1 TGGCAGCGGTAGCAA CGCCGC-GGCC TGCTC GGCCAGCGGCG GGCGCTGGGAGGATC Pmen_0986 1113511 - 1115838 + | hypothetical protein TERM 806 1115873 - 1115931 + F 95 -19.7 -3.33696 | gap 2, overlap 1115875 GTCATCGCCGAGCCG -TAGGGTGCGCCATGCGCACCGATG-CCT CAC AGGTCGCTGGTGCGCACGGCGCACCCTGC TTCGTTGCCGAAGCA TERM 807 1115875 - 1115928 + F 100 -26.1 -2.84098 | gap 1, overlap 1115873 CATCGCCGAGCCGTA GGGTGCGCCATGCGCACCGATG-CCT CAC AGGTCGCTGGTGCGCACGGCGCACCC TGCTTCGTTGCCGAA Pmen_0987 1116078 - 1117175 + | carboxynorspermidine decarboxylase Pmen_0988 1117303 - 1118544 + | saccharopine dehydrogenase TERM 808 1118572 - 1118602 + F 100 -22 -3.89614 | opp_overlap 1118577, overlap 1118577 AGCGCACGGGATCGA CAGAACGCCCGCCA TCT TGGCGGGCGTTTTG TTTCTCGCCGTTACC TERM 809 1118577 - 1118597 + F 100 -18.3 -4.99043 | opp_overlap 1118577, overlap 1118572 ACGGGATCGACAGAA CGCCCGCCA TCT TGGCGGGCG TTTTGTTTCTCGCCG TERM 810 1118597 - 1118577 - f 100 -18.3 -3.52102 | opp_overlap 1118577 1118572 ACGGGATCGACAGAA CGCCCGCCA TCT TGGCGGGCG TTTTGTTTCTCGCCG Pmen_0989 1118765 - 1120312 + | 2-isopropylmalate synthase TERM 811 1120671 - 1120692 + G 74 -12.3 -3.53091 | gap 1 CTGCGCCCTGCTGGT CGAGCTGCCC ACC GGGCAGC-CG TTTCAGAGCCGCGAT Pmen_0990 1120309 - 1121088 + | hypothetical protein Pmen_0991 1121243 - 1121695 + | SSU ribosomal protein S18P alanine acetyltransferase Pmen_0992 1122103 - 1121786 - | Rieske (2Fe-2S) domain-containing protein TERM 812 1121914 - 1121891 - G 81 -11.7 -3.96148 | opp_overlap 1121904 GTTCTCGATCAGAAA CAGCGCGCC GTGCGT GGCGCACTG GATCAGGCTGCCGCT TERM 813 1123349 - 1123379 + G 72 -4.7 -4.46212 | gap 2 GCTCGGGCCGCGTGT GCCTGATGGGCTGGC GAT GCTGGCC-G-CAGGC TTTTATCCTGCCAGC Pmen_0993 1122531 - 1123430 + | periplasmic binding protein Pmen_0994 1123427 - 1124467 + | transport system permease protein Pmen_0995 1124467 - 1125234 + | hemin importer ATP-binding subunit Pmen_0996 1125250 - 1126134 + | hypothetical protein Pmen_0997 1126194 - 1126601 + | hypothetical protein TERM 814 1126657 - 1126638 - T 100 -15 -5.40072 | opp_overlap 1126652 CCTCTGGCAAAAAAA GACCCGGC AAGA GCCGGGTC AATAACCGTGATTAG TERM 815 1126824 - 1126842 + T 86 -13.8 -3.54408 | opp_overlap 1126824, overlap 1126820 TCCGAAAACGCAAAA CCCCGGCT TAT GGCCGGGG TTCGTTTGCCTGCAA TERM 816 1126842 - 1126824 - T 100 -13.1 -4.4267 | opp_overlap 1126824 1126820 TCCGAAAACGCAAAA CCCCGGC TTATG GCCGGGG TTCGTTTGCCTGCAA Pmen_0998 1127660 - 1126863 - | cyclic nucleotide-binding protein Pmen_0999 1128038 - 1127766 - | TfoX domain-containing protein Pmen_1000 1128476 - 1128120 - | pentapeptide repeat-containing protein Pmen_1001 1130207 - 1128552 - | hypothetical protein Pmen_1002 1130230 - 1132548 + | penicillin-binding protein 1B Pmen_1003 1132616 - 1133296 + | tetratricopeptide TPR_4 Pmen_1004 1133296 - 1133625 + | hypothetical protein Pmen_1005 1134072 - 1133638 - | hypothetical protein Pmen_1006 1134473 - 1136197 + | acetolactate synthase 3 catalytic subunit ilvH 1136199 - 1136690 + | acetolactate synthase 3 regulatory subunit TERM 817 1136703 - 1136733 + T 83 -16.3 -3.07994 | opp_overlap 1136709, overlap 1136709 TGATCGCTGTGCTAA TAGAAAGCCCCGC CTGGT GCGGGGCTTTTTA TTGCCTGAAATTCAG TERM 818 1136709 - 1136727 + T 100 -13.1 -5.10461 | opp_overlap 1136709, overlap 1136703 CTGTGCTAATAGAAA GCCCCGC CTGGT GCGGGGC TTTTTATTGCCTGAA TERM 819 1136727 - 1136709 - T 95 -13.1 -4.1891 | opp_overlap 1136703 1136709 CTGTGCTAATAGAAA GCCCCGC CTGGT GCGGGGC TTTTTATTGCCTGAA Pmen_1008 1137626 - 1136745 - | DNA-binding transcriptional regulator IlvY Pmen_1009 1137752 - 1138768 + | ketol-acid reductoisomerase TERM 820 1138782 - 1138814 + F 76 -12.8 -3.32963 | opp_overlap 1138790, overlap 1138783 1138790 AAGGTCTGCGATGTG CGAAAGAACGCGGC TTTAT GCCGCGTTTTTTCA TTCTGAGGTGAGGCT TERM 821 1138783 - 1138813 + F 78 -16.3 -2.59564 | opp_overlap 1138790, overlap 1138782 1138790 AGGTCTGCGATGTGC GAAAGAACGCGGC TTTAT GCCGCGTTTTTTC ATTCTGAGGTGAGGC TERM 822 1138790 - 1138806 + F 100 -10.8 -5.32944 | opp_overlap 1138790, overlap 1138783 1138782 CGATGTGCGAAAGAA CGCGGC TTTAT GCCGCG TTTTTTCATTCTGAG TERM 823 1138806 - 1138790 - f 78 -10.8 -3.91716 | opp_overlap 1138790 1138783 1138782 CGATGTGCGAAAGAA CGCGGC TTTAT GCCGCG TTTTTTCATTCTGAG Pmen_1010 1138916 - 1139731 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 824 1139751 - 1139792 + F 100 -16.8 -3.45023 | gap 1 GTAATTTCTTCCTCA CTCCGTGGTCTACAGTTCG TTTTC CGAACTGTAG-TCGCGGAG TTGTCATGCTCATCA TERM 825 1140368 - 1140396 + G 87 -6.7 -5.00895 | gap 1, overlap 1140370 GAGACGCTGGTCGAT CGCGAGCGCATG CCTGGT CA-GCGCTCGGG TTTTTCTCTGATCGA Pmen_1011 1139798 - 1140808 + | putative sulfite oxidase subunit YedY Pmen_1012 1140808 - 1141434 + | putative sulfite oxidase subunit YedZ TERM 826 1147205 - 1147238 + F 100 -20.5 -4.09117 | opp_overlap 1147209, overlap 1147209 GTCAAGCTCCTATAC GAAACCCCAGATCTC GAAA GAGGTCTGGGGTTTC TTCTTTGTGGCTGGA TERM 827 1147234 - 1147209 - f 91 -13.3 -3.83205 | opp_overlap 1147205 1147209 AGCTCCTATACGAAA CCCCAGATCTC GAAA GAGGTCTGGGG TTTCTTCTTTGTGGC TERM 828 1147209 - 1147234 + F 100 -15.5 -4.63048 | opp_overlap 1147209, overlap 1147205 AGCTCCTATACGAAA CCCCAGATCTC GAAA GAGGTCTGGGG TTTCTTCTTTGTGGC TERM 829 1147312 - 1147341 + F 90 -14.3 -3.65902 | gap 1 AGGAGCATCTCGGTG CGCGTGGCGCACCC TAC GGGTGTGCCG-GCG TTTGGCTACGCTCGA Pmen_1013 1147388 - 1148047 + | paraquat-inducible protein A Pmen_1014 1148034 - 1148651 + | paraquat-inducible protein A TERM 830 1148697 - 1148669 - g 73 -3.7 -4.66833 | opp_overlap 1148669, overlap 1148671 1148672 TGCCAATGGCAAAAA CACGGCCGGCC TCCAACT GGTCGGCCATC TGGGTTCTGCCGCTG TERM 831 1149811 - 1149761 - g 70 -11.1 -3.53012 | gap 2 TTCGCCCCGGCGAAA GCGGCAGCCCGCCTCGGCGCGAG TTCGAGG CGCGAGCCAAGGCG--CCGCCGC TGGATCTGGGTGCAC TERM 832 1150549 - 1150594 + G 71 -13.9 -2.83822 | gap 1, opp_overlap 1150544 1150543, overlap 1150546 CGCGAAGAAGGCCTG CGCCTGGTGCTGAGCGCGCCGC GGC GCGGCTCGATCAA-GCCGGGCG TGATTGTCAGCTACC Pmen_1015 1148644 - 1150947 + | hypothetical protein Pmen_1016 1152208 - 1151048 - | SMC domain-containing protein Pmen_1017 1152601 - 1152233 - | hypothetical protein Pmen_1018 1153494 - 1152598 - | short chain dehydrogenase Pmen_1019 1153983 - 1153519 - | hypothetical protein Pmen_1020 1155597 - 1154161 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 833 1155649 - 1155664 + r 78 -7.5 -4.59414 | overlap 1155648 CGTGCTGTGTCGGTG CGGCG TGTGCC CGCCG TTTTCCTTGTTCTAG Pmen_1021 1156339 - 1155692 - | hypothetical protein Pmen_1022 1157510 - 1156377 - | hypothetical protein Pmen_1023 1158975 - 1157524 - | membrane bound O-acyl transferase, MBOAT family protein TERM 834 1159016 - 1159033 + r 79 -8.3 -4.56367 | GCAGCGCCCCCCTTT CCCCCCG CGAG CGGAGGG TTTGTTTGTGCCCTG algL 1160236 - 1159160 - | poly(beta-D-mannuronate) lyase TERM 835 1159622 - 1159594 - G 77 -15.3 -3.07043 | CGGACCAGTCGAACA GGTCGCGGCGATC GCC GATCACCGCCACC GCCATCACCGACCAG Pmen_1025 1161677 - 1160247 - | hypothetical protein Pmen_1026 1163224 - 1161689 - | carbohydrate-binding and sugar hydrolysis Pmen_1027 1164693 - 1163236 - | hypothetical protein Pmen_1028 1166066 - 1164690 - | Sel1 domain-containing protein Pmen_1029 1167240 - 1166077 - | type IV pilus assembly PilZ Pmen_1030 1168748 - 1167267 - | hypothetical protein TERM 836 1168494 - 1168511 + g 79 -3.3 -5.09426 | overlap 1168495 ATACACATGAGAGGG GTCGGCG TCCT TGCCGAG TTTTTTCACCTTGCG Pmen_1031 1170107 - 1168797 - | GDP-mannose 6-dehydrogenase Pmen_1032 1171584 - 1170805 - | hypothetical protein TERM 837 1171878 - 1171900 + H 72 -11.2 -3.36135 | opp_overlap 1171868 1171859 1171878 CGAAACCTGCAGACA GGTGGCGGCC ATT GGCCCTCACC TTGCTTGCACCTTCT Pmen_1033 1172007 - 1173398 + | PhoH family protein TERM 838 1173454 - 1173484 + F 80 -14.8 -3.05816 | gap 1, opp_overlap 1173441 TACCTGCATAGCCCA GCCGGGGT-TGCG CACAGC CGCACACCCCGGC TTGCATCCGGGCTAC TERM 839 1173773 - 1173762 - g 70 -2.2 -4.63486 | AGGCGGCGAAGAAAA CCAG CGAT CTGA TCCCCCTGTGCCATC moaC 1173563 - 1174039 + | molybdenum cofactor biosynthesis protein C Pmen_1035 1174036 - 1174278 + | molybdopterin synthase subunit MoaD Pmen_1036 1174432 - 1174884 + | molybdopterin synthase subunit MoaE Pmen_1037 1175206 - 1175042 - | hypothetical protein Pmen_1038 1175380 - 1177296 + | metallophosphoesterase TERM 840 1177578 - 1177561 - f 71 -8.3 -4.03234 | opp_overlap 1177560 1177557 CCCCTTTCAGATAAA CGCCGCC CAAG GGTGGCG CTCGCTTTATGAATG Pmen_1039 1177587 - 1178498 + | hypothetical protein Pmen_1040 1178600 - 1179178 + | hypothetical protein Pmen_1041 1179633 - 1179187 - | hypothetical protein Pmen_1042 1179824 - 1179660 - | hypothetical protein Pmen_1043 1179846 - 1180316 + | hypothetical protein Pmen_1044 1180540 - 1180313 - | hypothetical protein TERM 841 1180848 - 1180875 + r 80 -15 -3.01918 | opp_overlap 1180852, overlap 1180852 AGCCACCATATTTTT CAAAGGGTTAGC TTCG GCTAGCCCTTTG TCGTTTCTGGGGTAG TERM 842 1180852 - 1180871 + r 84 -10 -4.17701 | opp_overlap 1180852, overlap 1180848 ACCATATTTTTCAAA GGGTTAGC TTCG GCTAGCCC TTTGTCGTTTCTGGG Pmen_1045 1181354 - 1180935 - | PilT domain-containing protein TERM 843 1181358 - 1181382 + r 77 -8.6 -4.3208 | opp_overlap 1181363, overlap 1181359 AAGCAGGATCATTCA TCAAAGCTCG CTGCC CGGGCTTTGG TTTTGCGTTCTGGCA Pmen_1046 1181596 - 1181351 - | hypothetical protein TERM 844 1182917 - 1182906 - H 81 -4.4 -4.91852 | overlap 1182907 TCCACGAAAAAGAAA TGCT ATGC AGCA ACCAAATAATTGCTT TERM 845 1183977 - 1183994 + G 77 -4.1 -4.73388 | opp_overlap 1183966 AAAACCACGATGCTT CGCTG GATGGCAA CAGCG TTTTTGCTCAAACTT TERM 846 1186348 - 1186329 - g 93 -5 -5.27923 | overlap 1186332 GAACGTTATAAAAAA CCAGCAAT AGCT ATTGCTCG GGCTCTAGGTTTTAT Pmen_1048 1183089 - 1186739 + | signal transduction protein TERM 847 1186806 - 1186821 + F 80 -3.2 -5.02476 | GCAAGCGAGATAGGT GACTAC AACG GCAGTC TTTTTTGAAAGCTCT TERM 848 1186969 - 1186990 + F 100 -14.5 -5.30616 | opp_overlap 1186964 1186963 CACCATAAATTTCAA GGGGTTAGC GCAA GCTAACCCC TTTTTGTTTGCGTGC Pmen_1049 1187239 - 1187598 + | IS66 Orf2 family protein TERM 849 1188687 - 1188675 - g 72 -6.9 -4.20354 | overlap 1188676 AACCCAAGGGCAAAA CCGGC CGT GCCGA CATGGCGCTGAACCT Pmen_1050 1187618 - 1189180 + | transposase IS66 Pmen_1051 1189757 - 1189194 - | hypothetical protein TERM 850 1189941 - 1189956 + r 89 -11.8 -4.14397 | opp_overlap 1189941 ACAGGTAAAGAAAAA CCCCGC CGAG GCGGGG TTTCCTTTATGCGCT TERM 851 1189956 - 1189941 - R 100 -11.8 -5.31519 | opp_overlap 1189941 ACAGGTAAAGAAAAA CCCCGC CGAG GCGGGG TTTCCTTTATGCGCT Pmen_1052 1191080 - 1189980 - | translation-associated GTPase Pmen_1053 1191696 - 1191106 - | peptidyl-tRNA hydrolase Pmen_1054 1192365 - 1191760 - | 50S ribosomal protein L25/general stress protein Ctc TERM 852 1192450 - 1192432 - R 100 -13.1 -4.62069 | opp_overlap 1192402 GCGGTAGGGCAAAAA GCCCCGC ACGAG GCGGGGC GCATTACGTCAGCGG Pmen_1055 1193403 - 1192471 - | ribose-phosphate pyrophosphokinase TERM 853 1193256 - 1193272 + g 74 -5.1 -4.5287 | opp_overlap 1193254 1193256, overlap 1193251 GCTGAATCAGGAACA CGTCC TTGCCGC GGACG TTTTCGTTGATTTCG ipk 1194565 - 1193690 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 1195440 - 1194826 - | outer membrane lipoprotein LolB Pmen_1058 1197167 - 1195440 - | TPR repeat-containing protein hemA 1197377 - 1198657 + | glutamyl-tRNA reductase prfA 1198654 - 1199736 + | peptide chain release factor 1 Pmen_1061 1199801 - 1200685 + | HemK family modification methylase Pmen_1062 1200678 - 1201439 + | molybdopterin biosynthesis protein MoeB TERM 854 1201489 - 1201500 + G 72 -7.2 -4.27316 | overlap 1201484 TGAATCAGTCGCAGG CGCC GGTC GGCG TTTTCGATTCGGGGG Pmen_1063 1201473 - 1202264 + | glutamate racemase TERM 855 1202247 - 1202277 + F 76 -6.2 -4.64334 | overlap 1202250 CTGGGCGAACAGGCG CAAGTTCACGTATT TTA AATATGCGAACTAG TTTTATTGGGACCTT Pmen_1064 1202367 - 1202882 + | hypothetical protein TERM 856 1202890 - 1202939 + T 95 -20.1 -3.20382 | opp_overlap 1202904, overlap 1202904 GTTTCTGATCCGTTT CGGCAGACAAAAAAGGCCGGGCA GCGA TGCCCGGCCTTTTTCGTTCGGCG TTCGTCAGTCTGGCG TERM 857 1202925 - 1202904 - T 100 -17.3 -5.36441 | opp_overlap 1202890 1202904 TCGGCAGACAAAAAA GGCCGGGCA GCGA TGCCCGGCC TTTTTCGTTCGGCGT TERM 858 1202904 - 1202925 + T 100 -17.3 -4.86621 | opp_overlap 1202904, overlap 1202890 TCGGCAGACAAAAAA GGCCGGGCA GCGA TGCCCGGCC TTTTTCGTTCGGCGT Pmen_1065 1203488 - 1202964 - | hypothetical protein Pmen_1066 1204755 - 1203481 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 859 1204566 - 1204613 + g 88 -16.4 -3.68886 | gap 1, opp_overlap 1204607 1204608, overlap 1204556 1204607 1204608 CGGCCGGGTCGTTCA CCCTG-ATCTCGGCACGCAGC TCGCTCT GCGGCGTGCCGAAATGCAGGG TTTCGCTGCCTTCCT Pmen_1067 1205542 - 1204742 - | hypothetical protein TERM 860 1204856 - 1204840 - G 72 -13.7 -3.02144 | GTATGCGCTTGAACA GCAGGCG CAG CGCCTGC CAGTAGATGGCCGCC Pmen_1068 1206789 - 1205542 - | amine oxidase Pmen_1069 1207541 - 1206786 - | short-chain dehydrogenase/reductase SDR TERM 861 1206838 - 1206860 + g 75 -12 -3.64822 | ATGGCCAGTTGCAGC CTGCTGGGCA GGC TGCCGAGCAG TTTCAGTACGGCGAT TERM 862 1207438 - 1207481 + g 78 -13.8 -3.62046 | gap 1 GCCTGCAGCGGGCCG CTGCTGCGCGC-GCTGAGCGC CAG GCGGTGGCCGGCGCGCAGCAG TTCTTCCGCCAGTGC Pmen_1070 1207960 - 1207538 - | hypothetical protein Pmen_1071 1209390 - 1207957 - | deoxyribodipyrimidine photo-lyase type I Pmen_1072 1210340 - 1209378 - | MerR family transcriptional regulator Pmen_1073 1211290 - 1210340 - | hypothetical protein Pmen_1074 1211775 - 1211545 - | hypothetical protein Pmen_1075 1212758 - 1211772 - | FAD dependent oxidoreductase TERM 863 1213557 - 1213587 + G 73 -3.9 -4.66537 | AGTGGATGCCGTGGA TCCATATCGCCGA CCAAA TCGGCCTGATGGA TTTTCTCTTGCAGCA Pmen_1076 1212941 - 1213864 + | NAD-dependent epimerase/dehydratase hemH 1213877 - 1214899 + | ferrochelatase Pmen_1078 1215064 - 1216395 + | major facilitator transporter Pmen_1079 1216527 - 1217297 + | hypothetical protein Pmen_1080 1218029 - 1217304 - | extracellular solute-binding protein Pmen_1081 1218450 - 1218109 - | alkylphosphonate utilization operon protein PhnA Pmen_1082 1218919 - 1219698 + | peptidase C26 Pmen_1083 1220680 - 1219727 - | hypothetical protein Pmen_1084 1221135 - 1220704 - | alkylhydroperoxidase Pmen_1085 1221276 - 1222703 + | GntR family transcriptional regulator Pmen_1086 1223170 - 1222697 - | water stress/hypersensitive response protein Pmen_1087 1224070 - 1223225 - | hypothetical protein Pmen_1088 1224921 - 1224157 - | phytanoyl-CoA dioxygenase TERM 864 1224878 - 1224863 - G 74 -10.4 -3.80573 | opp_overlap 1224838 GGCAGCAGCACGAAA CCCTGC TGGT GCAGGG CCTGCAGTCGTTCAG Pmen_1089 1225950 - 1225021 - | RpiR family transcriptional regulator Pmen_1090 1226783 - 1226019 - | ABC transporter related Pmen_1091 1227920 - 1226808 - | succinylglutamate desuccinylase/aspartoacylase Pmen_1092 1228628 - 1227933 - | polar amino acid ABC transporter, inner membrane subunit Pmen_1093 1229329 - 1228640 - | polar amino acid ABC transporter, inner membrane subunit TERM 865 1229382 - 1229358 - R 100 -18.5 -3.74693 | overlap 1229339 1229359 GTGGAGCGCAGGAAA GCCGGCGCCCG AGG CGGGCGCCGGT GAGAGCGGCGGATTA TERM 866 1229381 - 1229359 - R 100 -22 -2.84602 | overlap 1229339 1229358 TGGAGCGCAGGAAAG CCGGCGCCCG AGG CGGGCGCCGG TGAGAGCGGCGGATT Pmen_1094 1230171 - 1229395 - | cationic amino acid ABC transporter, periplasmic binding protein Pmen_1095 1230548 - 1232311 + | cyanophycinase-like protein TERM 867 1232485 - 1232512 + G 71 -9 -3.83226 | overlap 1232488 ACCGAGCGTGCGGGT GCTGGAGCGGGT GCAG ACCGGCGCCGGC TTCTTCTCGGTGATT TERM 868 1232595 - 1232611 + G 73 -15.1 -2.82519 | overlap 1232593 CGTTTCGCCTCAAGC GCCGGCG CGG CGCCGGC TACTTCGTGTGCTGG Pmen_1096 1232390 - 1232710 + | hypothetical protein TERM 869 1233199 - 1233147 - g 75 -11.5 -3.75024 | gap 4, opp_overlap 1233193 GCCGATCAGCAACAA CCGCACCGCCGA--T-GCCG-AGGTGC CGG ACAGCTACGGCCAGATCGGCGGTGCGG TGAAGATGCGCGCCT Pmen_1097 1232773 - 1234113 + | outer membrane porin TERM 870 1234120 - 1234155 + F 89 -7.4 -5.07486 | gap 1, overlap 1234121 ATCCTGTAACGGCAT TCTCCGGGCGGCGACAG ATC CCGG-GCCGTCCGGAGC TTTTTCTTCAAGGTC TERM 871 1234121 - 1234154 + F 77 -10.9 -3.63768 | gap 1, overlap 1234120 TCCTGTAACGGCATT CTCCGGGCGGCGACAG ATC CCGG-GCCGTCCGGAG CTTTTTCTTCAAGGT TERM 872 1234196 - 1234213 + F 84 -10.5 -4.17048 | CTCCTTTGGCCTTAA GGCGTCG CCAG CGGCGCC TTCTTTTCCGCCAGG Pmen_1098 1234268 - 1235032 + | extracellular solute-binding protein Pmen_1099 1235125 - 1236381 + | cyanophycinase Pmen_1100 1236598 - 1237392 + | short-chain dehydrogenase/reductase SDR Pmen_1101 1238268 - 1237702 - | TetR family transcriptional regulator Pmen_1102 1238869 - 1238300 - | thioesterase superfamily protein Pmen_1103 1238953 - 1240152 + | Bcr/CflA subfamily drug resistance transporter Pmen_1104 1240149 - 1241549 + | dihydrolipoamide dehydrogenase TERM 873 1241574 - 1241595 + T 74 -6.6 -4.371 | gap 1, opp_overlap 1241556, overlap 1241560 1241558 TAGGGTGCGCCGTGC GCACCGGCT TCTCC AG-CGGTGC TTTTGGTATGGTCCC Pmen_1105 1242160 - 1241795 - | hypothetical protein TERM 874 1242204 - 1242183 - R 100 -12.9 -4.36914 | overlap 1242184 GCTCCTGCGAGAAAA CGGCGGGGC CGCG GCCCCGCCC CTGATCAGCGGAAAA TERM 875 1242203 - 1242184 - R 85 -16.4 -3.21934 | overlap 1242183 CTCCTGCGAGAAAAC GGCGGGGC CGCG GCCCCGCC CCTGATCAGCGGAAA Pmen_1106 1243135 - 1242209 - | carbamate kinase TERM 876 1243284 - 1243237 - R 81 -5.7 -4.75174 | opp_overlap 1243237 CATGCAAGGCAAAAA CAGGAGAGGAA-GCGCAGTGTAC TTTT GTACA-TGAGCATTCCGATCCTG TTTTTAACGCAGCAG TERM 877 1243237 - 1243284 + r 74 -5.7 -4.56597 | opp_overlap 1243237 CATGCAAGGCAAAAA CAGGAGAGGAA-GCGCAGTGTAC TTTT GTACA-TGAGCATTCCGATCCTG TTTTTAACGCAGCAG Pmen_1107 1244341 - 1243331 - | ornithine carbamoyltransferase TERM 878 1244401 - 1244371 - R 93 -16 -3.57144 | opp_overlap 1244370 1244369 1244373 GTGGGCAGCTTGAAA CGGGCCCGGCGGCG GAT CACCGCCGGGGCTG GCTTGTTCAGTAATC TERM 879 1244373 - 1244399 + r 76 -15 -2.66602 | opp_overlap 1244371, overlap 1244370 1244369 GGGCAGCTTGAAACG GGCCCGGCGGCG GAT CACCGCCGGGGC TGGCTTGTTCAGTAA Pmen_1108 1245658 - 1244408 - | arginine deiminase Pmen_1109 1247102 - 1245675 - | arginine/ornithine antiporter TERM 880 1247497 - 1247531 + r 100 -16.6 -3.56643 | overlap 1247498 CGTGTGGGTGCAGCA TGCCGTGGAAAGCT TTCAGCC AGCTTTCCACGGCG TTTCCGACCTGTGAC TERM 881 1247498 - 1247530 + r 86 -17.9 -2.73771 | overlap 1247497 GTGTGGGTGCAGCAT GCCGTGGAAAGCT TTCAGCC AGCTTTCCACGGC GTTTCCGACCTGTGA putA 1251493 - 1247558 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 882 1251985 - 1252004 + H 77 -11.4 -3.64822 | gap 1 TCGTCGAGGGGTTGA CCGCTGGCG ATA CGCC-GCGG TTTGAATCGAAGCGT Pmen_1111 1252055 - 1252270 + | hypothetical protein Pmen_1112 1252525 - 1252298 - | hypothetical protein TERM 883 1252566 - 1252549 - R 80 -4 -5.02074 | overlap 1252550 CGATTCGGGAAAAAA TGGCCG GACTGG CGGCCC GAGAGACGCCGGCCA Pmen_1113 1253841 - 1252885 - | LysR family transcriptional regulator TERM 884 1253632 - 1253660 + g 77 -12.5 -3.64703 | gap 1, opp_overlap 1253629 1253650 CTGGCCGAGAATCTG CCGGC-AGCGCT CCAGAT AGCGCTCGCCGG TTTCGGTCAGGGCCA Pmen_1114 1254637 - 1254035 - | lysine exporter protein LysE/YggA TERM 885 1254450 - 1254404 - G 78 -9.9 -4.0348 | gap 1 ATACCAGAGCAGAAA CGCAGCG-CCGCCCCAGCGGGC GATG GCCAGCAGTGTCGGGCTCTGCG TCAGCAGGGTAGCCA Pmen_1115 1255050 - 1254637 - | hypothetical protein Pmen_1116 1255146 - 1256039 + | chromosome replication initiation inhibitor protein Pmen_1117 1256280 - 1257278 + | NAD-dependent epimerase/dehydratase Pmen_1118 1257556 - 1257269 - | hypothetical protein TERM 886 1257395 - 1257411 + g 71 -9.3 -3.82031 | overlap 1257408 CAGTTCCGCCAGGCG CCGGCCG ACG CGGCGGG TTTCCTCGTCATTGG Pmen_1119 1257905 - 1258753 + | hypothetical protein TERM 887 1258768 - 1258798 + T 100 -22 -3.36671 | opp_overlap 1258768 1258769, overlap 1258769 1258775 AGGCACCGCGTTAAA TGCACAAGACCCGC AAT GCGGGTCTTGTGCG TTCTGGCCTTGGCGT TERM 888 1258798 - 1258768 - T 100 -19.8 -3.54543 | opp_overlap 1258768 1258769 1258775, overlap 1258769 AGGCACCGCGTTAAA TGCACAAGACCCGC AAT GCGGGTCTTGTGCG TTCTGGCCTTGGCGT TERM 889 1258769 - 1258797 + T 100 -23.3 -2.61681 | opp_overlap 1258768 1258769, overlap 1258768 1258775 GGCACCGCGTTAAAT GCACAAGACCCGC AAT GCGGGTCTTGTGC GTTCTGGCCTTGGCG TERM 890 1258797 - 1258769 - T 100 -23.3 -2.72511 | opp_overlap 1258769 1258768 1258775, overlap 1258768 GGCACCGCGTTAAAT GCACAAGACCCGC AAT GCGGGTCTTGTGC GTTCTGGCCTTGGCG TERM 891 1258775 - 1258791 + T 86 -13.7 -3.45054 | opp_overlap 1258769 1258768, overlap 1258769 1258768 GCGTTAAATGCACAA GACCCGC AAT GCGGGTC TTGTGCGTTCTGGCC Pmen_1120 1259994 - 1258945 - | NADH:flavin oxidoreductase/NADH oxidase Pmen_1121 1260343 - 1260023 - | ArsR family transcriptional regulator Pmen_1122 1260446 - 1261021 + | hypothetical protein Pmen_1123 1263788 - 1261074 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 892 1263222 - 1263186 - G 70 -13 -3.01924 | gap 1, opp_overlap 1263219 CAGGGTGCCGGAATA GGC-CATGCAGCGCCGG TCGC CCAGCGCCGCATCCGCC TGGCAATGGGCCAGG TERM 893 1264223 - 1264252 + G 73 -10.6 -3.71848 | opp_overlap 1264238 GACCTGCTGGTGGTG GGCGCGCATCGC AAATCG GCGCTGCGCGAC TTCTTCGTCGGCACC Pmen_1124 1263920 - 1264768 + | UspA domain-containing protein TERM 894 1264759 - 1264785 + T 86 -18 -2.94695 | overlap 1264753 GCTGGTAGTGCCGCC GGCCGCGTGAGC CCG GCTCACGCCGCC TCTGCTTGCTCCTGC Pmen_1125 1265549 - 1264776 - | lyso-ornithine lipid acyltransferase TERM 895 1265641 - 1265661 + r 79 -14.7 -2.90075 | TGTGCAGGAGCGACT CTGCTCGCC AGT GGCGAGCGG TCTCGTTCGCGAGCA Pmen_1126 1266424 - 1265693 - | ornithine-acyl[acyl carrier protein] N-acyltransferase TERM 896 1266495 - 1266517 + H 100 -7.7 -5.58074 | gap 1 AGCTCAGGCTAGGTT CG-CGCGGTG TCAC CACCGTGACG TTTTTTTGATGCTTA TERM 897 1267323 - 1267268 - g 77 -16.2 -2.52676 | gap 1 CAGGCGCCCAATGCA CCGACCACGCACCTGCTGCTGGCCG GCCTGTT CGCCCAGCAGCAGGCAC-TGAGCGG CGAGCTGCAGGCGGC TERM 898 1267457 - 1267436 - g 81 -12.3 -3.86194 | gap 1, opp_overlap 1267391 1267436 1267435, overlap 1267423 AAGCGCCTGGAGAAA GCGCGGCAGA TTG TC-GCCGCGC GTTGATCCATATCAG Pmen_1127 1266572 - 1267462 + | hypothetical protein Pmen_1128 1267529 - 1268314 + | beta-lactamase domain-containing protein Pmen_1129 1268514 - 1269632 + | beta-lactamase Pmen_1130 1269629 - 1269949 + | hypothetical protein TERM 899 1269944 - 1270000 + F 100 -23.7 -2.62184 | opp_overlap 1269946 1269961, overlap 1269992 CAGTTGTTGCCGAGC AAGTAGGGCGGGTGAAACCCGCCACCT TGG AAGCGGCGGGTTGCACCCGCCCTACGG TGCTGTGCGCGCCGG TERM 900 1269998 - 1269946 - f 100 -35.1 -3.14132 | opp_overlap 1269944 1269992, overlap 1269961 GTTGTTGCCGAGCAA GTAGGGCGGGTGAAACCCGCCACCT TGG AAGCGGCGGGTTGCACCCGCCCTAC GGTGCTGTGCGCGCC TERM 901 1269983 - 1269961 - f 86 -13.4 -3.53444 | opp_overlap 1269944, overlap 1269946 GTAGGGCGGGTGAAA CCCGCCACCT TGG AAGCGGCGGG TTGCACCCGCCCTAC Pmen_1131 1270024 - 1270650 + | YceI family protein TERM 902 1271153 - 1271173 + G 72 -6.7 -4.25104 | TGGCAGCAGCTGTTC GAGCACCAG TGG CTGGCGCGC TTTTCCTGGCGCCCG Pmen_1132 1270658 - 1271806 + | phospholipase D/transphosphatidylase TERM 903 1273981 - 1273991 + G 74 -5.4 -4.54047 | TCAGGGGCGCGAATG CGAT GAA ATCG TTTTCTCTACGGTGC Pmen_1133 1271975 - 1274719 + | superfamily I DNA/RNA helicase Pmen_1134 1275111 - 1276904 + | hypothetical protein TERM 904 1277044 - 1277016 - g 72 -13.1 -3.14931 | GTGAGCGCCGAGGAA GCGGCCAAGCTGG GCA CCAGCCTGACCCC GCTGGGGGCGCAGAT Pmen_1135 1276926 - 1278299 + | hypothetical protein TERM 905 1278316 - 1278339 + F 84 -17.4 -2.69151 | overlap 1278313 TCTCGTGCTTGTCAA CGGCGCCGCC TGCG GGCGGCGTCG TGCTGTCTGGCCGCC Pmen_1136 1278464 - 1281070 + | regulatory protein, LuxR TERM 906 1281130 - 1281155 + T 82 -14.7 -3.15544 | overlap 1281101 1281154 AGCTCTATGGGCCGC CGCTGGTGGGC TTTA GCCCACCAGGG TTGGTCCGCGTGGGC Pmen_1137 1282606 - 1281218 - | short chain fatty acid transporter TERM 907 1282563 - 1282573 + g 95 -4.6 -5.39755 | AGTGTGTTGAACATG GGGG ATG CCTC TTTTTTATGGTTGTA TERM 908 1282668 - 1282650 - R 79 -9.5 -4.18303 | opp_overlap 1282650 1282648 1282667 AGCACAAATGACAAA GCCCGGC ACGAG GCCGAGC TGTTTGGCGTAGCCC TERM 909 1282675 - 1282703 + r 87 -17.5 -3.11178 | overlap 1282667 AGGCCGAGCTGTTTG GCGTAGCCCGGAT TGC ATCCGGGCTACGG TGTTCGGGTTGCTTA Pmen_1138 1283897 - 1282716 - | acetyl-CoA acetyltransferase TERM 910 1283126 - 1283184 + g 100 -12.2 -4.56597 | overlap 1283129 TCGCGCTCATCAGCA GCACGGCAGCGGCGCCGTCGTTGAGGCT GGA GGCGTTGCCGGCGGTGACGCTCCCGTCC TTTTTGAACGCCGGC TERM 911 1283129 - 1283181 + g 71 -12.5 -3.23708 | overlap 1283126 CGCTCATCAGCAGCA CGGCAGCGGCGCCGTCGTTGAGGCT GGA GGCGTTGCCGGCGGTGACGCTCCCG TCCTTTTTGAACGCC TERM 912 1284068 - 1284030 - R 100 -13.9 -4.8622 | TGGCCGAACTAAAAA CGCCCCGAAGACGCC GTGCGTGGT GGCGCCTTCGAGACG GTAGACAACTTAGAA Pmen_1139 1284734 - 1284078 - | butyryl-CoA:acetate CoA transferase TERM 913 1284752 - 1284762 + r 78 -6.8 -4.69027 | overlap 1284744 1284751 TCTTGTCCTCAGCTG CGCA GGG TGCG TTTTTCGATGCGTTT Pmen_1140 1285443 - 1284745 - | 3-oxoacid CoA-transferase, A subunit TERM 914 1285609 - 1285591 - g 74 -12.4 -3.53012 | TCGCCGTGGCGCAAA GCCTGAGC TTC GCCCAGGC CTGCGAGCGCCTGCA Pmen_1141 1285548 - 1286441 + | LysR family transcriptional regulator Pmen_1142 1287214 - 1286621 - | MobA-like protein-like protein TERM 915 1287281 - 1287330 + r 100 -22.2 -3.06302 | TTGCGGTGAGGCGAT CTGCGAACCGCCAGGACGACGC ACGGCG GCGCCGTCCTGGCGGTTCGGAC TTCACTGCGCCTGCT Pmen_1143 1288186 - 1287332 - | ThiJ/PfpI domain-containing protein Pmen_1144 1288506 - 1288183 - | antibiotic biosynthesis monooxygenase Pmen_1145 1288602 - 1289516 + | LysR family transcriptional regulator TERM 916 1289559 - 1289591 + T 77 -8.3 -4.34488 | gap 1, overlap 1289562 GATTGCTCAGCCGGC CAGACCCGCCGCCC TGGCGC GGGCGGCGTG-CAG TTTCTTGTAGCTGTC Pmen_1146 1291748 - 1289550 - | hypothetical protein TERM 917 1291828 - 1291877 + H 70 -10.8 -3.53012 | gap 3, overlap 1291829 CTTGTGCTTTTGCGG TGGCGCC-G-ATGGTCGGGCCTGGC ACT GCCGGGCC-GATCATCCCGGCGCGG TTTCGGCCAGCGCCG TERM 918 1291930 - 1291948 + H 72 -2.3 -4.86216 | overlap 1291931 1291947 CGCGGTTGTTCGGGT TGCTGGC GGGTG GTCGGCG TTTGTTGTTTTTTAT TERM 919 1291982 - 1292013 + H 75 -2.2 -5.00616 | overlap 1291984 AACAAATATTGATAA TGGTTGTGGTTTGG CTGA TCATGCCACGGCTA TTTTTTAGAAAAACA glk 1292143 - 1293102 + | glucokinase Pmen_1148 1293159 - 1293890 + | two component transcriptional regulator TERM 920 1295167 - 1295148 - g 77 -12.2 -3.65812 | opp_overlap 1295145 1295144 TGTGCCCGAACAGAA GCTCGAAC AGGT GTTCGAGC CGCATTTTCGCCTGG Pmen_1149 1293883 - 1295322 + | integral membrane sensor signal transduction histidine kinase Pmen_1150 1295525 - 1296778 + | extracellular solute-binding protein Pmen_1151 1296950 - 1297858 + | binding-protein-dependent transport systems inner membrane component Pmen_1152 1297851 - 1298729 + | binding-protein-dependent transport systems inner membrane component Pmen_1153 1298740 - 1299885 + | ABC transporter related TERM 921 1299961 - 1299947 - f 71 -7 -4.2528 | opp_overlap 1299947 1299954 TGGCAATGGAAGAAA CCGGCG CTG CGGCGG TTATCCGCAGCATTC Pmen_1154 1300004 - 1301239 + | porin, LamB type TERM 922 1301256 - 1301301 + G 77 -13.1 -3.53012 | gap 1 CGCCTCGCGCCCGCT CGGCGCCGCCAGCG-GCGCTGC CGA GCTGCACCCGCTGGCCGGGCTG TTTGCCGAGCCCGGC TERM 923 1301389 - 1301373 - g 72 -13.7 -3.01712 | GCTGTTGCTCGAACA CCGCCTG TTC CAGGCGG CGTTCAGCCGTCAGG Pmen_1155 1301233 - 1302129 + | aldose 1-epimerase Pmen_1156 1303706 - 1302768 - | LysR family transcriptional regulator Pmen_1157 1303840 - 1304802 + | LysR family transcriptional regulator TERM 924 1304891 - 1304850 - T 76 -9.6 -4.08767 | gap 1, opp_overlap 1304850 1304857, overlap 1304857 CGTAGCCCCTGAAAA CACAAAACCCCTGAAATTC TCTAG GAAGATCAGGGGT-TTGTG CTTGCTTCAATTGGG TERM 925 1304885 - 1304857 - T 88 -7.4 -4.89567 | opp_overlap 1304850 1304857, overlap 1304850 CCTGAAAACACAAAA CCCCTGAAATTC TCTAG GAAGATCAGGGG TTTGTGCTTGCTTCA TERM 926 1304857 - 1304885 + T 71 -8.1 -4.10331 | opp_overlap 1304857 1304850, overlap 1304850 CCTGAAAACACAAAA CCCCTGAAATTCT CTA GGAAGATCAGGGG TTTGTGCTTGCTTCA TERM 927 1305102 - 1305074 - T 100 -15.3 -4.52589 | opp_overlap 1305070 1305074 GCCCTCGAGACAAAA GCCCCGCATCG CCTCATT CGACGCGGGGC TTCATTTGAGGTTAA TERM 928 1305074 - 1305102 + T 79 -13.1 -3.54489 | opp_overlap 1305074, overlap 1305070 GCCCTCGAGACAAAA GCCCCGCATCG CCTCATT CGACGCGGGGC TTCATTTGAGGTTAA Pmen_1158 1306102 - 1305137 - | hypothetical protein TERM 929 1305276 - 1305291 + g 70 -6.1 -4.19506 | AGGTTCTTAGCCTTC CTGCC CTTGTT GGCAG TTTTCAGCTTGGACT TERM 930 1305809 - 1305834 + g 83 -3.3 -5.20328 | gap 1, opp_overlap 1305812 1305813, overlap 1305811 1305813 GAGAACATCCAGCAT GAAGCTCTCGAT GTC GTCGAGAG-TGC TTTCTTTTTTTCCGA TERM 931 1306493 - 1306474 - H 71 -9.2 -3.79874 | opp_overlap 1306478 1306484 CGCGACAGAATATAA GCCAGCCG GCGA CGGCTGTC TAGCTGGCTGCTCTG Pmen_1159 1306575 - 1306763 + | phage transcriptional regulator, AlpA TERM 932 1306812 - 1306786 - f 93 -15.2 -3.85817 | opp_overlap 1306786 AGCTTGTGGCATAAA GGCTGCGACC TATAAAT GGTCGCAGCC TTTATGCCGATGAAG TERM 933 1306786 - 1306812 + F 93 -15.2 -3.87815 | opp_overlap 1306786 AGCTTGTGGCATAAA GGCTGCGACC TATAAAT GGTCGCAGCC TTTATGCCGATGAAG Pmen_1160 1307124 - 1308068 + | hypothetical protein TERM 934 1308436 - 1308426 - f 85 -3.2 -5.40072 | GTGGTCGGAAAAAAA CCAG CAA CTGA CGGATGTCGTTAAGA TERM 935 1308750 - 1308735 - g 70 -6 -4.17048 | CTGCTGCGAAAACAA GGCCGG CGAA CTGGCC CAACTGCGCGCTAAA Pmen_1162 1308712 - 1309512 + | cation diffusion facilitator family transporter TERM 936 1309717 - 1309701 - T 72 -12.3 -3.08679 | GGGCTTTATGCAATA CCCCCTT GAA AAGGGGG CTGGCTGTCAGCGTT Pmen_1163 1311407 - 1309845 - | transposase IS66 TERM 937 1310338 - 1310350 + g 72 -6.9 -4.20354 | overlap 1310339 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_1164 1311786 - 1311427 - | IS66 Orf2 family protein Pmen_1165 1312130 - 1311783 - | hypothetical protein TERM 938 1312251 - 1312218 - R 77 -10.9 -3.62859 | overlap 1312219 ATTACAATCGCGAAA GGGGGCTGGCAGGTG AGGG CACCTGCCAGCGACT GACTCAGAAAGCGTA TERM 939 1312250 - 1312219 - R 77 -14.4 -2.77233 | overlap 1312218 TTACAATCGCGAAAG GGGGCTGGCAGGTG AGGG CACCTGCCAGCGAC TGACTCAGAAAGCGT Pmen_1166 1313568 - 1312255 - | phosphate-selective porin O and P TERM 940 1312939 - 1312929 - G 75 -4.6 -4.59853 | opp_overlap 1312912 1312921 TCAACGGCGCAAAAA CGCC GCG AGCG TTGTAGCGTTTGACG Pmen_1167 1313987 - 1314904 + | LysR family transcriptional regulator TERM 941 1315008 - 1315042 + G 72 -5.5 -4.36914 | overlap 1315009 CTGGCACTGGCCATC ACGGCGGCGGCACTC AGTCA GGCTGCTTCCGCCGA TTTTCTCGGAGACAG Pmen_1168 1314978 - 1316306 + | outer membrane porin TERM 942 1316349 - 1316317 - f 85 -12.1 -3.74224 | opp_overlap 1316316 1316313 TTTAAACCATGGAAA GTTGCCTCTTCTG TTCTGTG CAGAAGGGGCAAC ATGATTCACTTCAAT TERM 943 1317247 - 1317236 - g 87 -7.2 -5.06414 | opp_overlap 1317235 1317236 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 944 1317591 - 1317575 - g 79 -2.9 -5.08601 | opp_overlap 1317576, overlap 1317576 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_1169 1316658 - 1317959 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Pmen_1171 1318463 - 1319803 + | outer membrane porin TERM 945 1319813 - 1319831 + F 85 -17.4 -2.87881 | opp_overlap 1319809 1319807 CTGTAACGACATTCA GGGGCGGC ATA GCCGCCCC TCTCTGACAAGATTG Pmen_1172 1319873 - 1320136 + | hypothetical protein TERM 946 1320224 - 1320241 + T 100 -14.1 -6.13503 | AGAGATGGTTCCTTG GCGCCCC TTTG GGGGCGC TTTTTTTTGTTCGTC Pmen_1173 1322349 - 1320916 - | heavy metal sensor signal transduction histidine kinase Pmen_1174 1323020 - 1322346 - | two component heavy metal response transcriptional regulator Pmen_1175 1323417 - 1324667 + | outer membrane efflux protein TERM 947 1325926 - 1325938 + G 71 -9.1 -3.79251 | CAGGCGAACGTGTAG CTGCC ACA GGCAG TTTCATCCTCAAGTC Pmen_1176 1324725 - 1325990 + | RND family efflux transporter MFP subunit TERM 948 1327573 - 1327560 - g 70 -3.7 -4.52347 | opp_overlap 1327560, overlap 1327554 1327561 GAAAGAAGAGGAAAA CGCGC TGAT GCGTG TTGCCCGGCGCACCT Pmen_1177 1326013 - 1329159 + | CzcA family heavy metal efflux protein TERM 949 1329369 - 1329340 - T 93 -8.5 -5.05153 | overlap 1329341 1329342 1329344 ATCGCAAAAAATAAA GTGATCCCGCACC GGTT GGTGCGAGATCTA AGCTGATGCTAGCGT TERM 950 1329368 - 1329341 - T 77 -12 -3.61465 | overlap 1329340 1329342 1329344 TCGCAAAAAATAAAG TGATCCCGCACC GGTT GGTGCGAGATCT AAGCTGATGCTAGCG TERM 951 1329367 - 1329342 - T 79 -15.5 -2.75795 | overlap 1329341 1329340 1329344 CGCAAAAAATAAAGT GATCCCGCACC GGTT GGTGCGAGATC TAAGCTGATGCTAGC TERM 952 1329365 - 1329344 - T 70 -12.3 -2.90326 | overlap 1329342 1329341 1329340 CAAAAAATAAAGTGA TCCCGCACC GGTT GGTGCGAGA TCTAAGCTGATGCTA Pmen_1178 1330018 - 1329389 - | hypothetical protein TERM 953 1329529 - 1329551 + g 79 -2.7 -5.06414 | gap 1 TCTTCGGGCGTGGCT TCGAGCTACC GAAC GG-GGCTTGA TTTTTCTTGGGGCCG TERM 954 1329718 - 1329748 + g 89 -14.8 -4.07885 | CGCATCCGTGTTCTC CACACTGCAGGG TTAAAGT CCCTGCGGTGTG TTTTACAAAGCGCTC Pmen_1179 1330457 - 1330113 - | hypothetical protein Pmen_1180 1330538 - 1330783 + | XRE family transcriptional regulator Pmen_1181 1331309 - 1330812 - | DNA repair protein RadC TERM 955 1331325 - 1331345 + r 75 -13.9 -2.91274 | GGTGTGTCTCCGGAT GGCGAGCCG ATT CGGCCCGCC TATGGTTAGGCTGAC Pmen_1182 1332247 - 1331351 - | hypothetical protein TERM 956 1332306 - 1332273 - R 100 -10.4 -5.26875 | gap 2 CTTGTAAGCAAAAAA GGCCAG-CCA-GCAGC GCGA ACTGCATGGACTGGCC AAGGGGAGGGATGGA Pmen_1183 1333340 - 1332336 - | Phage-related protein endonuclease-like protein TERM 957 1332524 - 1332537 + g 81 -3.7 -4.99043 | GCAGCATTTGCTTGA GCTCG GCCT CGCGC TTTTCTTTCTCGGAG TERM 958 1332875 - 1332906 + g 79 -11.7 -3.87373 | opp_overlap 1332873 GCAACTGCACATATT CGGGG-ACGCCTTCT TTCC AGA-GGCGTGCCCCG TTTATGCCGGCTGTC TERM 959 1333395 - 1333365 - R 100 -14.7 -4.52589 | opp_overlap 1333366, overlap 1333366 CTCGCGGACACAAAA CCGCCCGGTCAGC GCTGA ACTGACCGGGCGT TATGGAGTGGATGAA TERM 960 1333394 - 1333366 - R 95 -18.2 -3.31232 | opp_overlap 1333366, overlap 1333365 TCGCGGACACAAAAC CGCCCGGTCAGC GCTGA ACTGACCGGGCG TTATGGAGTGGATGA TERM 961 1333366 - 1333394 + r 93 -17.5 -3.33492 | opp_overlap 1333366 1333365 TCGCGGACACAAAAC CGCCCGGTCAG CGCTGAA CTGACCGGGCG TTATGGAGTGGATGA Pmen_1184 1334395 - 1333427 - | hypothetical protein TERM 962 1334449 - 1334429 - R 93 -14.7 -3.87641 | opp_overlap 1334443 AATAGCCGGCATAAA GCGCTGCGC ATG GCGCAGCAC CGGCATTTAGGGATG Pmen_1185 1334814 - 1334488 - | hypothetical protein Pmen_1186 1335369 - 1336154 + | hypothetical protein TERM 963 1336733 - 1336723 - g 70 -8.2 -3.90112 | opp_overlap 1336725 TCCGCTGCAAGCAAA GCGC TCG GCGC TAGAGCTTATCGCCA TERM 964 1338857 - 1338846 - g 79 -7.2 -4.59773 | opp_overlap 1338855 TTTTAGGTGGAAAAA CGCC AGAT GGCG ACAAACTTGCGCTCA Pmen_1187 1336151 - 1339321 + | DEAD/DEAH box helicase domain-containing protein Pmen_1188 1340638 - 1339379 - | phage integrase family protein TERM 965 1339831 - 1339845 + g 72 -5.7 -4.38712 | overlap 1339829 TCATGCGTTCAGCCG GGATC GTCCA GATCC TTTTCTCGAAGTCGA TERM 966 1339913 - 1339941 + g 79 -3.8 -4.91511 | overlap 1339916 AGTCATCGTGTGCAG TTGCCACTCGAT CAGGC ATCGAGTGGTTC TTTTTATGCTGGCGT TERM 967 1339916 - 1339938 + g 100 -12.1 -4.56153 | overlap 1339913 CATCGTGTGCAGTTG CCACTCGAT CAGGC ATCGAGTGG TTCTTTTTATGCTGG TERM 968 1340793 - 1340808 + H 71 -9 -3.79473 | opp_overlap 1340793 TCAGACACAAAAAAA GACGTC CGTG GACGTC TTTAGATGTTGTAAT TERM 969 1340808 - 1340793 - H 100 -9 -5.76633 | opp_overlap 1340793 TCAGACACAAAAAAA GACGTC CGTG GACGTC TTTAGATGTTGTAAT TERM 970 1341999 - 1342020 + G 75 -11.5 -3.72695 | GGATGATGTCAGCCA TCGCCCCGG TCTA CCGCGGCGA TTTCCTGGAAGGGGT TERM 971 1344195 - 1344241 + G 79 -16.6 -3.07816 | AGGAGGTGCGTCAGG TCGCGCTGGGCTTGCTGTACAG CGG CTATTGAGCGAGCCCAGCGTGA TTCACTCGCTGGCGG Pmen_1189 1341311 - 1344226 + | multi-sensor hybrid histidine kinase Pmen_1190 1344488 - 1344243 - | hypothetical protein Pmen_1191 1345579 - 1344554 - | RNA 3'-terminal-phosphate cyclase TERM 972 1344712 - 1344684 - G 74 -12.4 -3.53012 | TGCGTTGTGCTGAAA CTGCCGCCACCG GCCAT CGCTAGCGGCAG GAGCAATTGATCGGC TERM 973 1345559 - 1345531 - G 78 -10.1 -4.07568 | opp_overlap 1345532, overlap 1345532 GCGCGCTGCGCAAAA TCTGGCCGCCGCC GAT GGCGCCGTCCAGT TCGATAAAGTCCTTG TERM 974 1345558 - 1345532 - G 70 -13.6 -3.04398 | opp_overlap 1345532, overlap 1345531 CGCGCTGCGCAAAAT CTGGCCGCCGCC GAT GGCGCCGTCCAG TTCGATAAAGTCCTT TERM 975 1345532 - 1345558 + g 70 -13.6 -3.07291 | opp_overlap 1345531 1345532 CGCGCTGCGCAAAAT CTGGCCGCCGCC GAT GGCGCCGTCCAG TTCGATAAAGTCCTT Pmen_1192 1346469 - 1345681 - | nucleotidyltransferase-like protein TERM 976 1346442 - 1346468 + g 78 -5.9 -4.59212 | gap 1 TGCGCATGGCGCTGC TGAGCG-GGTGG TTTT CCATCACGTTCA TTTCTTTCGTTCCTT TERM 977 1346489 - 1346505 + r 78 -13.7 -3.2048 | TTCGTTCCTTGCATA GGCCGCT GGT AGCGGCC TTCCTAGCCTTTCAC Pmen_1193 1347735 - 1346509 - | hypothetical protein Pmen_1194 1348130 - 1347732 - | hypothetical protein Pmen_1195 1349304 - 1348162 - | band 7 protein TERM 978 1350107 - 1350132 + G 70 -6.1 -4.25104 | opp_overlap 1350098, overlap 1350109 1350117 AAAATGGCGGCCGAG CATCGGCCTGT GCCA GCAGGCTGATC TTTTGATCGACCGGC TERM 979 1350860 - 1350882 + G 74 -12.7 -3.51934 | opp_overlap 1350843, overlap 1350858 CCGCGACGGTCTGTT GCGTGCCGC AGATG GCGGCATGC TGTTTCTCGACGAAA Pmen_1196 1350012 - 1351613 + | regulator of RNA terminal phosphate cyclase Pmen_1197 1353460 - 1351607 - | hypothetical protein TERM 980 1352914 - 1352942 + g 72 -11.7 -3.55761 | opp_overlap 1352909 CGTAGAGAATGCTGT TGTCGTCGCCTTC GAT GAAGGCGCCGAAA TTTAGCGCGTAGCTC Pmen_1198 1353604 - 1353915 + | TraR/DksA family transcriptional regulator Pmen_1199 1355548 - 1353908 - | sodium/hydrogen exchanger Pmen_1200 1355691 - 1358180 + | ATP-dependent protease-like protein TERM 981 1358255 - 1358279 + F 79 -8.7 -4.27584 | opp_overlap 1358255 CGCGTCATGCACAGA GTTATCCAC AGAATGC GTGGATAAC TTTTGCCTTCACAGT Pmen_1201 1358346 - 1358699 + | hypothetical protein Pmen_1202 1358784 - 1359347 + | hypothetical protein TERM 982 1359369 - 1359398 + F 100 -19.3 -4.564 | TCGTCTGCCTGACTG CCGCCCGGCCGTT GTCT AACGGACGGGCGG TTTTCGTTTGGCCTT Pmen_1203 1359489 - 1359791 + | hypothetical protein Pmen_1204 1359803 - 1361365 + | deoxyribodipyrimidine photolyase-related protein Pmen_1205 1361362 - 1361526 + | hypothetical protein Pmen_1206 1361597 - 1362226 + | peptidylprolyl isomerase, FKBP-type TERM 983 1362309 - 1362270 - T 100 -21.5 -3.89524 | opp_overlap 1362270 1362276, overlap 1362271 ACCCTACTGGAGAAA TGCAAACGGGGCGCCCC ATCAAA AGGGCGCCCCGTTTGCG TTAGGTAGGGTGCGC TERM 984 1362270 - 1362309 + T 100 -23 -3.06796 | opp_overlap 1362270 1362271, overlap 1362276 ACCCTACTGGAGAAA TGCAAACGGGGCGCCC CATCAAAA GGGCGCCCCGTTTGCG TTAGGTAGGGTGCGC TERM 985 1362308 - 1362271 - T 100 -25 -2.93393 | opp_overlap 1362270 1362276, overlap 1362270 CCCTACTGGAGAAAT GCAAACGGGGCGCCCC ATCAAA AGGGCGCCCCGTTTGC GTTAGGTAGGGTGCG TERM 986 1362276 - 1362303 + T 100 -17 -3.76952 | opp_overlap 1362271 1362270, overlap 1362270 CTGGAGAAATGCAAA CGGGGCGCCC CATCAAAA GGGCGCCCCG TTTGCGTTAGGTAGG Pmen_1207 1362613 - 1362386 - | hypothetical protein TERM 987 1362484 - 1362517 + g 79 -13.1 -3.62597 | gap 1, overlap 1362487 GCTCGTGCAGGTCCA GATCGCCCTGGTCGCG CAA CTCGTCCAGGGCG-TC TTCTTCGAGCATGGC TERM 988 1362487 - 1362515 + g 82 -15.9 -3.39288 | overlap 1362484 CGTGCAGGTCCAGAT CGCCCTGGTCGCG CAA CTCGTCCAGGGCG TCTTCTTCGAGCATG Pmen_1208 1365876 - 1362823 - | multidrug efflux protein TERM 989 1365889 - 1365906 + r 76 -14.1 -2.99319 | CATAAGGATTTCCTT GGCCGCC CTGC GGCGGCC TGTCTATCAGCAGTT TERM 990 1365999 - 1366023 + r 74 -11.3 -3.46068 | overlap 1365997 CCCGTTTTCCCTCTT GGCCTCACCCC GAA GGGGCGAGGAC TGTTTGCATTCGGCG Pmen_1209 1367221 - 1366076 - | RND family efflux transporter MFP subunit TERM 991 1366717 - 1366730 + g 71 -9.5 -3.79906 | TGGTACCGGCGAAGG GCGCG AGCA CGCGC TTCTTGTCCAACTGC Pmen_1210 1368985 - 1367363 - | methyl-accepting chemotaxis sensory transducer Pmen_1211 1370817 - 1369297 - | hypothetical protein TERM 992 1370641 - 1370599 - G 86 -16.9 -3.26319 | AATCGCCGAGATCAA GCCGCCGGAGGTGGCGCCG ATGAA CAGCGCCACCAGCAGCGAC AGACCCGCCTGCGGG Pmen_1212 1371339 - 1370827 - | hypothetical protein Pmen_1213 1372383 - 1371406 - | hypothetical protein Pmen_1214 1373812 - 1372418 - | D-glucarate dehydratase TERM 993 1374456 - 1374489 + G 71 -9.5 -3.8211 | gap 1 GGCGCCCTACGGTGC CTCGGCGCTGTTCGCC GCC GGCG-GCACCGGCGAG TTCTTCTCCCTGGCA Pmen_1215 1374322 - 1375233 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 994 1375274 - 1375234 - f 82 -14.6 -3.14881 | gap 1, opp_overlap 1375258 CAAGGCGCGCAGTAA CGCTGCAGGTGCCGCTCGC CCCG GCGAGCGGC-CCGGTCGCG CCGCGGCAGGCCGGG TERM 995 1376550 - 1376536 - g 72 -8.5 -4.08767 | opp_overlap 1376543 TGCAGGTGCCGAAAA CGCCG GGCCT CGGCG TCGAGCTGGATTGGG Pmen_1216 1375344 - 1376693 + | D-glucarate dehydratase TERM 996 1376908 - 1376926 + G 70 -8.9 -3.96148 | overlap 1376899 1376907 GGGTCGGGTGCGCTA CAGCATC TTGCT GATGCTG TTTCTGGTCACCACC Pmen_1217 1376876 - 1378216 + | d-galactonate transporter Pmen_1218 1378239 - 1379795 + | galactarate dehydratase TERM 997 1380290 - 1380323 + G 73 -13.1 -3.28712 | gap 1 TCGGCGAGGCGGTGG CGCAGCGG-GCGGCGG GCT TCGCCATGCCGCTGCG TTATCACAACCGCCG Pmen_1219 1379809 - 1380750 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 998 1380915 - 1380935 + F 100 -15.4 -5.07567 | CCTCACCTGCAGCAT CGGCGCGC CACAA GCGCGCCG TTTTTTGCGCTCTGC Pmen_1220 1381137 - 1382066 + | ABC transporter related Pmen_1221 1382063 - 1382824 + | ABC-2 type transporter Pmen_1222 1383302 - 1382910 - | secreted protein-like protein Pmen_1223 1385786 - 1383390 - | ATP-dependent protease La TERM 999 1383564 - 1383612 + g 77 -5.1 -4.57569 | gap 1 GCGTACGCCGCCGAT GGGC-AGCACCTGGCCGGTGAG GGTCAG CTCGCCGGTCATGGCCACGCCC TTTTTCGGCGCCTGG TERM 1000 1384138 - 1384164 + g 75 -9.2 -4.12902 | overlap 1384095 GCCGCGTCGCTGATG GACAGGCGCGCC TTT GGCACGCCGGCC TTTTCCAGCTGCTTG Pmen_1224 1386588 - 1385884 - | hypothetical protein TERM 1001 1386087 - 1386064 - G 72 -8.8 -4.03234 | GCGCTCGCAGAGAAA GCGCATCTGC ATCT GCAGACCCGC CGGGCAGCGCGAATA TERM 1002 1386792 - 1386805 + H 80 -3.7 -5.0538 | opp_overlap 1386783, overlap 1386790 AACCCATCCGCTGGT CGCGG GTTG CGGCG TTTTTTCCCGTAAAG Pmen_1225 1386863 - 1387612 + | AraC family transcriptional regulator TERM 1003 1388352 - 1388400 + G 89 -17.4 -3.53012 | gap 2 CCCTGGCCAGCAGCG GCCCTGCCGAGC-CGC-CCGCGCC GCC GGCGCCGAGCGCGTTCGGCGAGGC TTTCAGGAAGGCCGC Pmen_1226 1387694 - 1388434 + | hypothetical protein TERM 1004 1389120 - 1389083 - g 71 -12.5 -3.27994 | opp_overlap 1389090, overlap 1389084 GCAAGCGCAGATGAA GGCCGCCGGCGCGATGC CGCA GCGTCTCGACGGCGGCA GCGAGCACTACTTCG TERM 1005 1389119 - 1389084 - g 74 -16 -2.56475 | opp_overlap 1389090, overlap 1389083 CAAGCGCAGATGAAG GCCGCCGGCGCGATGC CGCA GCGTCTCGACGGCGGC AGCGAGCACTACTTC Pmen_1227 1388421 - 1390760 + | diguanylate cyclase/phosphodiesterase Pmen_1228 1390764 - 1391615 + | hypothetical protein Pmen_1229 1391618 - 1392037 + | globin Pmen_1230 1392634 - 1392047 - | phosphoheptose isomerase Pmen_1231 1393938 - 1392649 - | putative aminopeptidase 2 Pmen_1232 1394771 - 1394136 - | ribosomal large subunit pseudouridine synthase A TERM 1006 1394831 - 1394802 - R 100 -23.7 -4.3739 | GATTGGGCGATAAAA GCGAATGGCGGCC GTAA GGCCGCCATTCGC ATGATCCAGTTAAAA minE 1395293 - 1395039 - | cell division topological specificity factor MinE Pmen_1234 1396105 - 1395290 - | septum site-determining protein MinD TERM 1007 1396138 - 1396173 + r 84 -5.3 -4.99035 | opp_overlap 1396159 AATGAAGATAAACGC GGGAATCCGTAGGCC ATTCAA GGCTTCCAGATGCCC TTTTTGTGTCCCTGA minC 1396936 - 1396208 - | septum formation inhibitor Pmen_1236 1397184 - 1398116 + | lipid A biosynthesis lauroyl acyltransferase TERM 1008 1398153 - 1398139 - f 70 -3.5 -4.69326 | ATACTCAACAGAAAA TCAGG ATTGG CCCGA TGACTGCAGTTGCCC Pmen_1237 1398153 - 1399334 + | patatin Pmen_1238 1400283 - 1399429 - | pirin domain-containing protein TERM 1009 1400394 - 1400356 - R 88 -19.1 -2.52795 | opp_overlap 1400367, overlap 1400367 AATGGGTGCAATTTA TGCCGCCTAAATATCGA TTTCG TCGATATTTAGGCGGCG CTCAGTCGGCGATCT Pmen_1239 1401166 - 1400396 - | VacJ family lipoprotein Pmen_1240 1402457 - 1401159 - | putative serine protein kinase, PrkA Pmen_1241 1403031 - 1402543 - | GCN5-related N-acetyltransferase Pmen_1242 1403316 - 1403095 - | membrane protein-like protein Pmen_1243 1403468 - 1403839 + | hypothetical protein TERM 1010 1404348 - 1404362 + G 84 -9.2 -4.57073 | opp_overlap 1404341 GTCAACAACGCCGGG GTCGCC TCG GGCGGC TTTTTCGACGAGCTG Pmen_1244 1404084 - 1404896 + | short chain dehydrogenase Pmen_1245 1405006 - 1406157 + | major facilitator transporter Pmen_1246 1406232 - 1406660 + | hypothetical protein Pmen_1247 1406670 - 1407002 + | hypothetical protein Pmen_1248 1407182 - 1408495 + | phosphate-selective porin O and P TERM 1011 1408524 - 1408542 + F 100 -17.4 -5.52384 | opp_overlap 1408524 CTGCTCCTGAATTGA GCCCCGCC ACT GGCGGGGC TTTTTTTCGTCCGCC TERM 1012 1408542 - 1408524 - f 83 -17.4 -2.52464 | opp_overlap 1408524 CTGCTCCTGAATTGA GCCCCGCC ACT GGCGGGGC TTTTTTTCGTCCGCC Pmen_1249 1408578 - 1409702 + | hypothetical protein TERM 1013 1409801 - 1409828 + F 77 -3.5 -5.00616 | gap 1, overlap 1409801 1409802 CCAGAAGTTCCCCGG C-CTGGAGATTT CTGCA AAAACTCCAGAG TTTTTTGCAAGAAGC Pmen_1250 1410159 - 1411649 + | sodium/proline symporter TERM 1014 1411690 - 1411727 + F 100 -20.7 -4.53303 | overlap 1411696 GCTCCGTAGCCAGTG CTGCAACGGCCGACACC GCAA GGTGTCGGCCGTTTTAG TTTTATATGGGGATG TERM 1015 1411696 - 1411721 + F 100 -20.5 -4.75518 | overlap 1411690 TAGCCAGTGCTGCAA CGGCCGACACC GCAA GGTGTCGGCCG TTTTAGTTTTATATG Pmen_1251 1411832 - 1412050 + | hypothetical protein TERM 1016 1412106 - 1412146 + T 76 -14 -3.02144 | gap 1, overlap 1412133 TTCGCTGTCGGCTCA GTTCAGCGCCAGGCCCAGC GCCT GCAGGGCCTGGCGAT-AGC TGTTGCCAGCCATGC Pmen_1252 1412987 - 1412103 - | alpha/beta fold family hydrolase-like protein Pmen_1253 1416180 - 1413082 - | membrane carboxypeptidase (penicillin-binding protein)-like protein TERM 1017 1416107 - 1416073 - G 70 -6.3 -4.28994 | gap 2, opp_overlap 1416074, overlap 1416074 CAGCAGTGAGTAAAA CGCCAGACGCCAGCGGC GTG GCCGC-GGAG-CCGGCT TGTCGTCGACCGTCG Pmen_1254 1416381 - 1417061 + | methyltransferase type 12 TERM 1018 1417113 - 1417164 + G 72 -12.9 -3.09635 | overlap 1417102 1417156 TGCCGGCCGCGGTGG CCTTCTATCAGCAGGCGCTCGGC TTCAGC GTCGGGCGCGTGCTGTTCGACGG TTCGGTCGTCGAGAT Pmen_1255 1417064 - 1417498 + | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_1256 1417485 - 1418306 + | aldo/keto reductase Pmen_1257 1419306 - 1418347 - | hypothetical protein TERM 1019 1419277 - 1419255 - G 91 -11.9 -4.25283 | overlap 1419256 AGGCGCTGAGCAAAA GGGCGCCGC ACAGG GCGGCGCCG GTCAGGCGAAGGTTG TERM 1020 1419276 - 1419256 - G 78 -15.4 -3.14848 | overlap 1419255 GGCGCTGAGCAAAAG GGCGCCGC ACAGG GCGGCGCC GGTCAGGCGAAGGTT Pmen_1258 1421042 - 1419327 - | prolyl-tRNA synthetase TERM 1021 1420003 - 1419976 - G 72 -7 -4.1899 | gap 1 GCACCGGAGGCAAAA TCGCTCATCAGCG CCA CGCTG-CGATCGA CGATGCAGGGGATCG Pmen_1259 1421161 - 1421574 + | thioesterase superfamily protein TERM 1022 1421586 - 1421632 + T 100 -21.1 -3.77196 | gap 1, opp_overlap 1421593 1421594 1421598, overlap 1421594 1421598 TTGAGGAAATGTAAC CCG-GAAATGAAACAGCCCGGC ATAT GCCGGGCTGTTTCGTTTCGCCG TTTGCTCGGTAATCG TERM 1023 1421624 - 1421593 - T 100 -18.8 -3.61536 | opp_overlap 1421586 1421594 1421598, overlap 1421594 1421598 AATGTAACCCGGAAA TGAAACAGCCCGGC ATAT GCCGGGCTGTTTCG TTTCGCCGTTTGCTC TERM 1024 1421594 - 1421623 + T 100 -22.3 -2.78327 | opp_overlap 1421593 1421594 1421598, overlap 1421586 1421598 ATGTAACCCGGAAAT GAAACAGCCCGGC ATAT GCCGGGCTGTTTC GTTTCGCCGTTTGCT TERM 1025 1421623 - 1421594 - T 100 -22.3 -2.7644 | opp_overlap 1421594 1421586 1421598, overlap 1421593 1421598 ATGTAACCCGGAAAT GAAACAGCCCGGC ATAT GCCGGGCTGTTTC GTTTCGCCGTTTGCT TERM 1026 1421619 - 1421598 - T 100 -17.3 -4.06903 | opp_overlap 1421598 1421594 1421586, overlap 1421594 1421593 AACCCGGAAATGAAA CAGCCCGGC ATAT GCCGGGCTG TTTCGTTTCGCCGTT TERM 1027 1421598 - 1421619 + T 100 -17.3 -4.06903 | opp_overlap 1421594 1421593 1421598, overlap 1421594 1421586 AACCCGGAAATGAAA CAGCCCGGC ATAT GCCGGGCTG TTTCGTTTCGCCGTT Pmen_1260 1422931 - 1421654 - | outer membrane porin TERM 1028 1422564 - 1422579 + g 72 -5.4 -4.42788 | gap 1, overlap 1422564 1422566 GTCTGAGTGTCGTCA CC-GCGA CCA TCGCTGG TTTTATCAAATTGAC TERM 1029 1422961 - 1422994 + H 81 -5.2 -5.01422 | overlap 1422963 TGGTTTAGAAGAGTT GCGCTGCCCATGTG TTTTGT TGTATGGGCGGCTC TTTCTTTTTGTGTCG Pmen_1261 1423580 - 1424011 + | histidine triad (HIT) protein Pmen_1262 1424008 - 1424214 + | hypothetical protein TERM 1030 1424218 - 1424245 + T 100 -18.6 -4.06491 | opp_overlap 1424224, overlap 1424224 CCGCATTACTGAATT GAAAAAGCCCGG TTCC CCGGGCTTTTTC TTTGTGTGCGATTCA TERM 1031 1424239 - 1424224 - T 100 -11.8 -4.75174 | opp_overlap 1424224 1424218 TACTGAATTGAAAAA GCCCGG TTCC CCGGGC TTTTTCTTTGTGTGC TERM 1032 1424224 - 1424239 + T 100 -11.8 -5.42975 | opp_overlap 1424224, overlap 1424218 TACTGAATTGAAAAA GCCCGG TTCC CCGGGC TTTTTCTTTGTGTGC Pmen_1263 1424875 - 1424258 - | cold-shock DNA-binding protein family protein Pmen_1264 1426115 - 1425048 - | diguanylate cyclase TERM 1033 1426185 - 1426202 + r 88 -14.1 -3.59262 | opp_overlap 1426185 TCTGCCTAATGAAAA GGCCCGG AAAA CCGGGCC TTTGGGCGTGTCACG TERM 1034 1426202 - 1426185 - R 100 -14.1 -4.4078 | opp_overlap 1426185 TCTGCCTAATGAAAA GGCCCGG AAAA CCGGGCC TTTGGGCGTGTCACG Pmen_1265 1426683 - 1426213 - | Ferritin, Dps family protein Pmen_1266 1427634 - 1426798 - | short-chain dehydrogenase/reductase SDR TERM 1035 1427594 - 1427612 + g 71 -3 -4.66833 | overlap 1427595 CCGATACCCGAGGCC GCGCCG GTGATCA CGGCGG TTTTTCCGCTTAGGG Pmen_1267 1428824 - 1427706 - | metal dependent phosphohydrolase TERM 1036 1429773 - 1429759 - g 75 -2.8 -4.72272 | overlap 1429761 1429764 TTCCTCGATGAAAAA GACATC ATG GACATC ACCGAGACCATGGTG aspS 1429024 - 1430799 + | aspartyl-tRNA synthetase TERM 1037 1430832 - 1430810 - f 95 -14.2 -4.12599 | opp_overlap 1430810 1430813, overlap 1430813 AATAAGCCTGCAAAA GAAGCCTGGA GAT CCCAGGCTTC TTCGTTATGGGGTGG TERM 1038 1430810 - 1430832 + F 86 -13.5 -3.45118 | opp_overlap 1430810 1430813, overlap 1430813 AATAAGCCTGCAAAA GAAGCCTGG AGATC CCAGGCTTC TTCGTTATGGGGTGG TERM 1039 1430829 - 1430813 - f 84 -10.1 -4.18164 | opp_overlap 1430810 1430813, overlap 1430810 AAGCCTGCAAAAGAA GCCTGGA GAT CCCAGGC TTCTTCGTTATGGGG TERM 1040 1430813 - 1430829 + F 73 -9.4 -3.8591 | opp_overlap 1430813 1430810, overlap 1430810 AAGCCTGCAAAAGAA GCCTGG AGATC CCAGGC TTCTTCGTTATGGGG Pmen_1269 1430905 - 1431654 + | hypothetical protein TERM 1041 1431694 - 1431721 + F 100 -15.6 -5.14563 | opp_overlap 1431694 TCGCGATCTGATCAA GCCGGAAGCGCT GAAC AGCGATTCCGGC TTTTTTCGTCGGGCC TERM 1042 1431721 - 1431694 - f 85 -15.6 -3.16564 | opp_overlap 1431694 TCGCGATCTGATCAA GCCGGAAGCGCT GAAC AGCGATTCCGGC TTTTTTCGTCGGGCC ruvC 1431808 - 1432332 + | Holliday junction resolvase ruvA 1432351 - 1432959 + | Holliday junction DNA helicase motor protein ruvB 1432973 - 1434025 + | Holliday junction DNA helicase B Pmen_1273 1434079 - 1434531 + | 4-hydroxybenzoyl-CoA thioesterase Pmen_1274 1434534 - 1435229 + | MotA/TolQ/ExbB proton channel Pmen_1275 1435257 - 1435709 + | biopolymer transport protein ExbD/TolR TERM 1043 1436196 - 1436183 - g 70 -3.7 -4.4846 | overlap 1436184 1436194 GAAGCGAAGAAGAAA GCCGC TGAA GAGGC CAAGAAAAAGGCCGC Pmen_1276 1435709 - 1436689 + | TonB family protein tolB 1436695 - 1437993 + | translocation protein TolB TERM 1044 1437997 - 1438007 + F 74 -6.8 -4.3255 | TACCTGAACTGATGC GGTG CTA CACC TTTATTGCTTAACAC Pmen_1278 1438046 - 1438546 + | OmpA domain-containing protein TERM 1045 1438683 - 1438741 + G 82 -17.3 -3.06796 | gap 1, overlap 1438685 CGGCGGGTTATGGTA CGGCCGGCGCCTACGCCGGAGCGGGTGC GCAA GCGCCCGCTTCAGCGCAGG-GCATGCTG TTCAATCAGCTCGAG TERM 1046 1438685 - 1438739 + G 81 -16.3 -3.09327 | gap 1, overlap 1438683 GCGGGTTATGGTACG GCCGGCGCCTACGCCGGAGCGGGTGC GCAA GCGCCCGCTTCAGCGCAGG-GCATGC TGTTCAATCAGCTCG Pmen_1279 1438553 - 1439365 + | TPR repeat-containing protein TERM 1047 1439379 - 1439408 + F 72 -11.6 -3.34962 | gap 1, opp_overlap 1439386, overlap 1439386 AAGCCGAGAATCGAT GAACAAACCCGCG CTCGT CGCGGGTTT-TTC TTATCCGGTCTCGCG TERM 1048 1439386 - 1439402 + F 100 -10.8 -5.19328 | opp_overlap 1439386, overlap 1439379 GAATCGATGAACAAA CCCGCG CTCGT CGCGGG TTTTTCTTATCCGGT TERM 1049 1439402 - 1439386 - f 84 -10.8 -4.26871 | opp_overlap 1439386 1439379 GAATCGATGAACAAA CCCGCG CTCGT CGCGGG TTTTTCTTATCCGGT TERM 1050 1439498 - 1439523 + F 78 -13.3 -3.24232 | overlap 1439496 1439499 1439502 GTCGCCATGCCTCGT CGAACGTCGGC CGCG GCCGACGTTCC TGTCTTTCCACGCAA TERM 1051 1439499 - 1439522 + F 83 -16.8 -2.54325 | overlap 1439498 1439496 1439502 TCGCCATGCCTCGTC GAACGTCGGC CGCG GCCGACGTTC CTGTCTTTCCACGCA TERM 1052 1439502 - 1439519 + F 79 -12.7 -3.42257 | overlap 1439499 1439498 1439496 CCATGCCTCGTCGAA CGTCGGC CGCG GCCGACG TTCCTGTCTTTCCAC Pmen_1280 1439548 - 1440228 + | radical SAM domain-containing protein Pmen_1281 1440231 - 1440905 + | exsB protein TERM 1053 1441050 - 1441067 + F 100 -11.3 -5.90981 | opp_overlap 1441050 CACCAGATCGCAAAA GCCAGTC GTCA GACTGGC TTTTTTTTGCTCTCG TERM 1054 1441067 - 1441050 - f 89 -11.3 -4.17657 | opp_overlap 1441050 CACCAGATCGCAAAA GCCAGTC GTCA GACTGGC TTTTTTTTGCTCTCG Pmen_1282 1441177 - 1442235 + | quinolinate synthetase TERM 1055 1442250 - 1442281 + T 90 -15.2 -3.64703 | opp_overlap 1442253 1442257, overlap 1442251 1442254 1442257 ATCTCGAAGTGTTCA ACAGGAAGCCCAGC CCGT GCTGGGCTTCTTGC TTTGCGTAGCCCGGA TERM 1056 1442251 - 1442280 + T 86 -18.7 -2.78679 | opp_overlap 1442253 1442257, overlap 1442250 1442254 1442257 TCTCGAAGTGTTCAA CAGGAAGCCCAGC CCGT GCTGGGCTTCTTG CTTTGCGTAGCCCGG TERM 1057 1442278 - 1442253 - T 76 -13.3 -3.04322 | opp_overlap 1442251 1442250 1442254 1442257, overlap 1442257 TCGAAGTGTTCAACA GGAAGCCCAGC CCGT GCTGGGCTTCT TGCTTTGCGTAGCCC TERM 1058 1442254 - 1442277 + T 100 -16.8 -3.54408 | opp_overlap 1442253 1442257, overlap 1442251 1442250 1442257 CGAAGTGTTCAACAG GAAGCCCAGC CCGT GCTGGGCTTC TTGCTTTGCGTAGCC TERM 1059 1442274 - 1442257 - T 76 -12.7 -3.36452 | opp_overlap 1442254 1442251 1442250 1442257, overlap 1442253 AGTGTTCAACAGGAA GCCCAGC CCGT GCTGGGC TTCTTGCTTTGCGTA TERM 1060 1442257 - 1442274 + T 86 -12.7 -3.90425 | opp_overlap 1442257 1442253, overlap 1442254 1442251 1442250 AGTGTTCAACAGGAA GCCCAGC CCGT GCTGGGC TTCTTGCTTTGCGTA Pmen_1283 1443438 - 1442365 - | hypothetical protein TERM 1061 1443534 - 1443554 + r 79 -9.7 -4.25104 | AGGTTGCCACAGCCA GGTTGCAGC CTG GCTGCAAGC TTTTCGTAAGCGCGG Pmen_1284 1444974 - 1443571 - | beta-lactamase domain-containing protein TERM 1062 1443629 - 1443653 + g 70 -9.9 -3.69618 | overlap 1443630 1443639 CAGTGCAGCCGTTCG CGCAGGGCCTG CTG CAGGGCCTGCA TCTTTTCCAGTTCGC TERM 1063 1443639 - 1443655 + g 70 -6.5 -4.19238 | overlap 1443630 1443629 GTTCGCGCAGGGCCT GCTGCAG GGC CTGCATC TTTTCCAGTTCGCCG TERM 1064 1444616 - 1444636 + g 80 -9 -4.19238 | gap 1, overlap 1444616 TTGATCGCCGGCTTG CC-CTGGCG TGCG CGCCAGCGG TTTTCCCATTCGGCG Pmen_1285 1445100 - 1447502 + | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Pmen_1286 1447540 - 1447734 + | hypothetical protein Pmen_1287 1448149 - 1447748 - | hypothetical protein Pmen_1288 1448492 - 1450189 + | membrane protein involved in aromatic hydrocarbon degradation Pmen_1289 1450249 - 1450983 + | DTW domain-containing protein Pmen_1290 1451914 - 1450943 - | hypothetical protein Pmen_1291 1452069 - 1452716 + | two component LuxR family transcriptional regulator Pmen_1292 1453679 - 1452753 - | LysR family transcriptional regulator TERM 1065 1453762 - 1453745 - g 70 -2.5 -4.63218 | opp_overlap 1453748, overlap 1453746 TTGCCGCGAATAAAA TGCCGCG CAAT CGCGTCT TCAGGCGCCCGATTC Pmen_1293 1453744 - 1454571 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 1066 1454580 - 1454621 + T 100 -24.7 -2.59564 | opp_overlap 1454572 1454585 1454592, overlap 1454585 1454592 GAAATAAGCGTTGCG TTAAACGACAAAGCCGCCC AATT GGGCGGCTTTGTCGTTTCA GTTGTAGGGTGCGCC TERM 1067 1454585 - 1454616 + T 100 -24.6 -3.80893 | opp_overlap 1454572 1454585 1454592, overlap 1454580 1454592 AAGCGTTGCGTTAAA CGACAAAGCCGCCC AATT GGGCGGCTTTGTCG TTTCAGTTGTAGGGT TERM 1068 1454616 - 1454585 - T 100 -24.6 -3.53343 | opp_overlap 1454585 1454580 1454592, overlap 1454572 1454592 AAGCGTTGCGTTAAA CGACAAAGCCGCCC AATT GGGCGGCTTTGTCG TTTCAGTTGTAGGGT TERM 1069 1454609 - 1454592 - T 95 -14.1 -4.13654 | opp_overlap 1454592 1454585 1454580, overlap 1454572 1454585 GCGTTAAACGACAAA GCCGCCC AATT GGGCGGC TTTGTCGTTTCAGTT TERM 1070 1454592 - 1454609 + T 100 -14.1 -4.15328 | opp_overlap 1454572 1454585 1454592, overlap 1454585 1454580 GCGTTAAACGACAAA GCCGCCC AATT GGGCGGC TTTGTCGTTTCAGTT Pmen_1294 1455262 - 1454708 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Pmen_1295 1456065 - 1455268 - | 3-oxoadipate enol-lactonase Pmen_1296 1457002 - 1456076 - | LysR family transcriptional regulator Pmen_1297 1457077 - 1457391 + | hypothetical protein TERM 1071 1457443 - 1457456 + F 72 -2.3 -4.74801 | opp_overlap 1457443 TGTCGATATATGTAA GCGGA TATT TGCGC TTTTTAATCGGCTTG TERM 1072 1458099 - 1458085 - g 81 -11.4 -3.92373 | GAGTTCAGCGAGAAA GGCCTG GCC CAGGCC AAGGCCAAGCTGGCT Pmen_1298 1457527 - 1458126 + | NAD(P)H dehydrogenase (quinone) Pmen_1299 1458345 - 1459112 + | MotA/TolQ/ExbB proton channel motB 1459122 - 1460012 + | flagellar motor protein MotB Pmen_1301 1460074 - 1460946 + | carboxylate/amino acid/amine transporter Pmen_1302 1460946 - 1461839 + | transporter DMT superfamily protein Pmen_1303 1462418 - 1461840 - | deaminase-reductase domain-containing protein TERM 1073 1462512 - 1462470 - R 81 -14.2 -3.28712 | gap 2, opp_overlap 1462449, overlap 1462471 GTGCCGCGGGGACAA GTTCTGCGGGCGCCGTACCG TTTGT CGGCA-GGCGCCCGCAGG-C TCAGTCCAGCACGTT TERM 1074 1462512 - 1462471 - R 76 -14.4 -2.57132 | gap 1, opp_overlap 1462449, overlap 1462470 TGCCGCGGGGACAAG TTCTGCGGGCGCCGTACCG TTTGT CGGCA-GGCGCCCGCAGGC TCAGTCCAGCACGTT Pmen_1304 1462920 - 1462513 - | hypothetical protein TERM 1075 1462571 - 1462548 - G 71 -14.6 -2.62616 | GGATTTCGTAGACGA TGCCGGTGGC GATG GCCACCAGCA CCACGTCGCGGCCAA Pmen_1305 1464278 - 1462977 - | MscS mechanosensitive ion channel Pmen_1306 1464441 - 1465766 + | DEAD/DEAH box helicase domain-containing protein Pmen_1307 1467755 - 1465920 - | ABC transporter related TERM 1076 1466071 - 1466092 + g 74 -7.9 -4.28774 | GCGATGGTGGACAGG CGGTGGGCG ATGG CGATCACCG TTTTGCCTTCCATCA Pmen_1308 1468863 - 1467799 - | membrane-bound metal-dependent hydrolase Pmen_1309 1468992 - 1469405 + | hypothetical protein mgsA 1469973 - 1469509 - | methylglyoxal synthase Pmen_1311 1470989 - 1469988 - | glyceraldehyde-3-phosphate dehydrogenase Pmen_1312 1471118 - 1472941 + | phosphogluconate dehydratase rdgC 1473995 - 1473030 - | recombination associated protein Pmen_1314 1474610 - 1475320 + | peptidylprolyl isomerase, FKBP-type TERM 1077 1475337 - 1475367 + F 100 -17.7 -3.85698 | gap 1, opp_overlap 1475324, overlap 1475339 1475362 ACTTGCACGCGTCAT CG-CAACGCCCCGT CTTG ACGGGGCGTTGTCG TTTCTGGCGCGGAAA TERM 1078 1475339 - 1475364 + F 90 -19.1 -3.00946 | opp_overlap 1475324, overlap 1475337 1475362 TTGCACGCGTCATCG CAACGCCCCGT CTTG ACGGGGCGTTG TCGTTTCTGGCGCGG TERM 1079 1475641 - 1475615 - f 93 -16.6 -3.28791 | opp_overlap 1475614 1475619, overlap 1475578 1475619 1475624 AGCTTCGGTGGATAA GCCAGGCAAGGC CAG GCATTGCCTGGC TTGCCGAGGAGGTCC TERM 1080 1475646 - 1475619 - f 78 -16.4 -2.59431 | gap 1, opp_overlap 1475614 1475619, overlap 1475578 1475615 1475624 TCGGTGGATAAGCCA GGCAAGGCCAGGC ATT GCCTGGC-TTGCC GAGGAGGTCCGATGA Pmen_1315 1475658 - 1476101 + | hypothetical protein Pmen_1316 1476822 - 1476052 - | hypothetical protein Pmen_1317 1477009 - 1477329 + | XRE family transcriptional regulator Pmen_1318 1477332 - 1477691 + | hypothetical protein Pmen_1319 1477684 - 1478169 + | Sel1 domain-containing protein Pmen_1320 1479912 - 1478158 - | diguanylate cyclase/phosphodiesterase TERM 1081 1479938 - 1479968 + r 74 -11 -3.54459 | opp_overlap 1479938 1479942, overlap 1479939 1479942 GATCTGGCAAAAAAA CGAAGGGGCCGGTT TTT GGCCGGCCCCTGCA TTTCACGACAGTTCG TERM 1082 1479968 - 1479938 - R 100 -11.8 -5.41143 | opp_overlap 1479938 1479939 1479942, overlap 1479942 GATCTGGCAAAAAAA CGAAGGGGCCGG TTTTTGG CCGGCCCCTGCA TTTCACGACAGTTCG TERM 1083 1479939 - 1479967 + r 77 -14.5 -2.72461 | opp_overlap 1479938 1479942, overlap 1479938 1479942 ATCTGGCAAAAAAAC GAAGGGGCCGGTT TTT GGCCGGCCCCTGC ATTTCACGACAGTTC TERM 1084 1479942 - 1479964 + r 76 -14.8 -2.64155 | opp_overlap 1479938 1479942, overlap 1479939 1479938 TGGCAAAAAAACGAA GGGGCCGGTT TTT GGCCGGCCCC TGCATTTCACGACAG TERM 1085 1479964 - 1479942 - R 95 -13.4 -4.03885 | opp_overlap 1479942 1479939 1479938, overlap 1479938 TGGCAAAAAAACGAA GGGGCCGG TTTTTGG CCGGCCCC TGCATTTCACGACAG Pmen_1321 1482130 - 1480016 - | carboxyl-terminal protease TERM 1086 1480335 - 1480354 + g 79 -11.4 -3.76952 | overlap 1480339 TCCGGATCATTGGCC GTGCGCCG GTCA TGGCGCAC TTTCAGTTCGCTCAG TERM 1087 1482198 - 1482178 - H 83 -15.4 -3.12351 | TGGCGCTAGACGTAA GCCCGGCG GTCTG CGCCGGGC CCGTTCCACTTGCAC Pmen_1322 1482226 - 1483188 + | alcohol dehydrogenase TERM 1088 1483202 - 1483218 + F 76 -12.3 -3.33969 | opp_overlap 1483193 GAACCAGGGCTGCAG CCCACGT GCG ACGTGGG TTGTAACATCGATTG TERM 1089 1483882 - 1483860 - g 77 -9.8 -3.96618 | GCCAAGTGGAAAGAA GGCGAAGCCA CTC TGGCTCCGTC GCTGGACCTGGTTGG Pmen_1323 1483344 - 1483907 + | peroxiredoxin TERM 1090 1483996 - 1484020 + F 100 -15 -4.63486 | overlap 1484013 1484015 CCTTGTGGTGCCCGA TGCCCGGGCG CGATC CGTCCGGGCA TTTTATTGCCCGAAT TERM 1091 1484013 - 1484034 + F 84 -5.8 -4.93696 | overlap 1483996 1484015 1484031 CCCGGGCGCGATCCG TCCGGGCA TTTTAT TGCCCGAA TTTTTCGTATTTGAG Pmen_1324 1484061 - 1485617 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1092 1485637 - 1485662 + T 100 -13.3 -5.03994 | opp_overlap 1485640, overlap 1485640 TTGTTGCAGAAGCGA AAAGGCCACCC CTCG GGGTGGCCTTC TTTTTATGTCTACCC TERM 1093 1485659 - 1485640 - T 100 -15 -4.3208 | opp_overlap 1485637 1485640 TTGCAGAAGCGAAAA GGCCACCC CTCG GGGTGGCC TTCTTTTTATGTCTA TERM 1094 1485640 - 1485659 + T 100 -15 -4.61353 | opp_overlap 1485640, overlap 1485637 TTGCAGAAGCGAAAA GGCCACCC CTCG GGGTGGCC TTCTTTTTATGTCTA Pmen_1325 1486608 - 1485766 - | hypothetical protein Pmen_1326 1486752 - 1487606 + | LysR family transcriptional regulator TERM 1095 1487630 - 1487653 + T 90 -5.2 -5.40072 | gap 1, overlap 1487632 1487633 GGGCCGCCTAGGCGG GTAGGGTGCGC CGT GCGCACCA-GC TTTTTTTGCGGCCGA Pmen_1327 1488350 - 1487697 - | HAD family hydrolase Pmen_1328 1489336 - 1488350 - | ABC transporter related Pmen_1329 1490127 - 1489333 - | binding-protein-dependent transport systems inner membrane component Pmen_1330 1490956 - 1490114 - | binding-protein-dependent transport systems inner membrane component TERM 1096 1490967 - 1490979 + r 73 -9.1 -3.96148 | opp_overlap 1490961 TTCATGCAAGCAGCT CCCTG CAC CAGGG TTTGTCGTGGGCCAC Pmen_1331 1491828 - 1490953 - | hypothetical protein TERM 1097 1491719 - 1491680 - G 100 -24.4 -3.14132 | overlap 1491685 CCGGCCTGGCAGTAA GCCAACAGGTGGCCCAGC GCAT GCTGGGCCACCTGATAGC TCAGGCCATCCAGTA TERM 1098 1491714 - 1491685 - G 100 -23.7 -3.20723 | overlap 1491680 CTGGCAGTAAGCCAA CAGGTGGCCCAGC GCAT GCTGGGCCACCTG ATAGCTCAGGCCATC TERM 1099 1491780 - 1491802 + g 73 -6.2 -4.42788 | opp_overlap 1491794, overlap 1491782 1491782 1491794 TCTCTCGTTCGGTCG TAGCCCGGAT GCA ATCCGGGGCA TTTTCTGCAATTGCC TERM 1100 1491822 - 1491794 - G 70 -13.2 -3.05816 | opp_overlap 1491782 1491782 1491780 1491794 GTAGCCCGGATGCAA TCCGGGGCATTT TCTGC AATTGCCCCGGA TTTCATCCGGGCTAC TERM 1101 1491794 - 1491822 + g 79 -13.2 -3.73224 | opp_overlap 1491794, overlap 1491782 1491782 1491780 GTAGCCCGGATGCAA TCCGGGGCATTT TCTGC AATTGCCCCGGA TTTCATCCGGGCTAC Pmen_1332 1492919 - 1491861 - | ABC-type Fe3+ transport system periplasmic component-like protein TERM 1102 1492637 - 1492659 + g 81 -8.4 -4.48987 | overlap 1492626 CGAAGGCGGCGCCGA CGTCACCG ATATCGG CGGTGGCG TTTTCCTTCTCGGCG Pmen_1333 1493235 - 1493951 + | GntR family transcriptional regulator Pmen_1334 1494140 - 1494514 + | DGPFAETKE family protein TERM 1103 1494647 - 1494628 - g 77 -7.8 -4.4261 | overlap 1494629 GCTCGAACAGGAAAA GGCGCTGA CCCG TCAGCGCG ACGCAATCAACCGCG Pmen_1335 1494548 - 1495330 + | protein of unknown function DUF899, thioredoxin family protein Pmen_1336 1495496 - 1495918 + | ketosteroid isomerase-like protein Pmen_1337 1496479 - 1495934 - | Sel1 domain-containing protein TERM 1104 1496848 - 1496827 - g 74 -10.1 -3.78934 | GTCGGCCTACAACAA GGCCTGGGA CGGC TACCAGGCC GTGGCCAGCTACGAC Pmen_1338 1496630 - 1497757 + | peptidase M14, carboxypeptidase A TERM 1105 1497865 - 1497855 - T 70 -3.2 -4.65895 | TGGTGGATGTAAAAA GCGA CAT TCAC CCAAGGGTTCGGCAT TERM 1106 1497972 - 1497954 - T 100 -11.7 -5.40072 | TGGCGGGCAAAAAAA GCCCGTC ACGAG GACGGGC GTAAAGTGCCGTAAA Pmen_1339 1499293 - 1498025 - | outer membrane porin Pmen_1340 1499760 - 1500113 + | 5-carboxymethyl-2-hydroxymuconate isomerase-like protein Pmen_1341 1500556 - 1500110 - | MerR family transcriptional regulator TERM 1107 1501022 - 1501000 - g 70 -13.4 -3.01712 | GCGTGCGGTGGAACA GCTGCGCCAG GTG CTGGCGGAGC TGCATGCGATGACGG Pmen_1342 1500635 - 1501213 + | NADPH-dependent FMN reductase Pmen_1343 1502559 - 1501435 - | glycine cleavage system T protein TERM 1108 1501681 - 1501704 + g 77 -3.6 -4.78107 | overlap 1501683 CTCCTGCGGCAGCAG GCCGACGCGC TTGC GCGCCACGCC TTTTTGCTGCTGCTC TERM 1109 1502596 - 1502614 + r 74 -11.6 -3.43117 | overlap 1502583 1502597 CCGCGCGCACCGGTT GGGGCCGC TTT GCGGCCCG TTGTACGTTGGGTGT TERM 1110 1502597 - 1502613 + r 76 -15.1 -2.65388 | overlap 1502583 1502596 CGCGCGCACCGGTTG GGGCCGC TTT GCGGCCC GTTGTACGTTGGGTG Pmen_1344 1503882 - 1502629 - | serine hydroxymethyltransferase TERM 1111 1503996 - 1504054 + r 95 -20.5 -3.04894 | gap 2, overlap 1503997 GGGCACGAGGTCATG --TAGGAGCCGGCTTGCCGGCGATGGCGG TTG CCGTGATCGCCAGCAAGCTGGCTCCTACA ATTTTCACCGCGCTT TERM 1112 1503997 - 1504055 + r 71 -7.59999 -4.08692 | gap 4, overlap 1503996 GGCACGAGGTCATGT ----AGGAGCCGGCTTGCCGGCGATGGCGG TTG CCGTGATCGCCAGCAAGCTGGCTCCTACAA TTTTCACCGCGCTTA Pmen_1345 1506920 - 1504068 - | glycine dehydrogenase Pmen_1346 1507313 - 1506930 - | glycine cleavage system protein H Pmen_1347 1507646 - 1508197 + | superoxide dismutase, copper/zinc binding Pmen_1348 1509816 - 1508296 - | putative PAS/PAC sensor protein Pmen_1349 1509890 - 1510096 + | hypothetical protein Pmen_1350 1511073 - 1510375 - | deoxyribonuclease I Pmen_1351 1511868 - 1511215 - | protein-disulfide isomerase-like protein TERM 1113 1511895 - 1511855 - G 83 -15.4 -3.57462 | opp_overlap 1511850 TACTGCAGTTCGAAA GAGTGGGGCGCCATGG TCGGGGTCT CCTGGGCGCCCCACTC TAAGGTTGCCTCGCG Pmen_1352 1513105 - 1511975 - | MscS mechanosensitive ion channel Pmen_1353 1514938 - 1513295 - | methyl-accepting chemotaxis sensory transducer TERM 1114 1515302 - 1515335 + r 74 -12.5 -3.15999 | opp_overlap 1515302 1515308, overlap 1515308 TCAGGTGCCAGAAAC GAAAAAGCCCCGTCA GTGA TGACGAGGCTTTTGC TTGGCTGTCTGGAGC TERM 1115 1515335 - 1515302 - R 79 -14.7 -2.91924 | opp_overlap 1515302 1515308, overlap 1515308 TCAGGTGCCAGAAAC GAAAAAGCCCCGTCA GTGA TGACGAGGCTTTTGC TTGGCTGTCTGGAGC TERM 1116 1515329 - 1515308 - R 100 -12.3 -5.04601 | opp_overlap 1515302 1515308, overlap 1515302 GCCAGAAACGAAAAA GCCCCGTCA GTGA TGACGAGGC TTTTGCTTGGCTGTC TERM 1117 1515308 - 1515329 + r 89 -10.1 -4.44548 | opp_overlap 1515308 1515302, overlap 1515302 GCCAGAAACGAAAAA GCCCCGTCA GTGA TGACGAGGC TTTTGCTTGGCTGTC TERM 1118 1515410 - 1515428 + r 78 -10.2 -3.85817 | opp_overlap 1515409 1515412 1515414 GTATTACCATTATAC GACACCCG CAG CGGGTGCC TTTATACCGGAACCT Pmen_1354 1516391 - 1515504 - | alpha/beta hydrolase fold Pmen_1355 1517475 - 1516783 - | ribosomal small subunit pseudouridine synthase A Pmen_1356 1517685 - 1517479 - | hypothetical protein Pmen_1357 1519211 - 1517685 - | diguanylate cyclase TERM 1119 1519246 - 1519277 + r 100 -17.3 -4.2803 | CCTCTTCTGCGTGCT TCAGGGCCGCCGG TTTGGT CCGGCGGCACTGA TTTTCCGTTGACCTG Pmen_1358 1522999 - 1519304 - | biotin carboxylation domain-containing protein TERM 1120 1520883 - 1520863 - G 73 -13.3 -3.28924 | overlap 1520831 CATCCGGCCCCAGAA TCACCGGCA TAT CGCCGGTGA AGTCCACCGCGCCGA TERM 1121 1523168 - 1523111 - R 100 -20.7 -3.85698 | gap 1, opp_overlap 1523130 TGTGCTGGGGACAAA TTTTGCAGGGCGGGTGAAA-CCCGCC GGGCCTT GGCGGGTTTTCACCCGCCCTGCGTCA GCTCCACACCAGCAC TERM 1122 1523130 - 1523148 + r 80 -10.2 -4.07885 | opp_overlap 1523111 GCAGGGCGGGTGAAA CCCGCCGG GCC TTGGCGGG TTTTCACCCGCCCTG Pmen_1359 1523801 - 1523166 - | hypothetical protein Pmen_1360 1524540 - 1523812 - | hypothetical protein Pmen_1361 1525688 - 1524621 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 1123 1526372 - 1526409 + G 78 -6.1 -4.65895 | overlap 1526344 TTGATCGACCAGGCG CGCCGCTTCTTCGCCCG CCCG CTGGAGGAGAAGATGCG TTTTTACATCGGCCA Pmen_1362 1526189 - 1527214 + | 2OG-Fe(II) oxygenase Pmen_1363 1527211 - 1528143 + | hypothetical protein Pmen_1364 1529176 - 1528307 - | ABC transporter related Pmen_1365 1529988 - 1529173 - | binding-protein-dependent transport systems inner membrane component TERM 1124 1530294 - 1530307 + r 71 -9.5 -3.71848 | TTGTGGTGCCGCGAT CCCGG CGAG CCGGG TTGTTCCTGCACGGG Pmen_1366 1531510 - 1530449 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Pmen_1367 1532300 - 1532749 + | hypothetical protein Pmen_1368 1533664 - 1532753 - | LysR family transcriptional regulator TERM 1125 1532862 - 1532901 + g 85 -17.8 -2.52676 | ACCAGGCCATAGGCC GACTGCTGCTGCAGGCTC GCCG GGGCCAGCGGCAGCAGGC TCAGTTGGCCGGCTG Pmen_1369 1533762 - 1535549 + | beta-lactamase domain-containing protein TERM 1126 1535783 - 1535840 + G 85 -13.3 -4.0828 | gap 1, overlap 1535789 CGAGCTGGTGCTGTT CGGCTCGCGCCTGCGGGGCCTGCCGCTG TTG TGGTGGCAGCGCCTGCAGGTGCT-GCTG TTTGGTGTTTTGCAT TERM 1127 1535789 - 1535835 + G 82 -17.2 -2.90633 | overlap 1535783 GGTGCTGTTCGGCTC GCGCCTGCGGGGCCTGCCGCTG TTG TGGTGGCAGCGCCTGCAGGTGC TGCTGTTTGGTGTTT Pmen_1370 1535628 - 1535873 + | hypothetical protein TERM 1128 1535887 - 1535945 + T 100 -22.7 -3.28712 | gap 1, overlap 1535887 GAATGCCGATGGCCC -TGGTGCGCACGGCGCACCCTACG ATGGGGGCGGCC CGTAGGGTGCGCCATGCGCACCAG TTCTACCGGGAAACG TERM 1129 1535887 - 1535944 + T 100 -28.7 -2.57132 | overlap 1535887 GAATGCCGATGGCCC TGGTGCGCACGGCGCACCCTACG ATGGGGGCGGCC CGTAGGGTGCGCCATGCGCACCA GTTCTACCGGGAAAC TERM 1130 1536069 - 1536042 - T 70 -4 -4.59773 | gap 1 CTCTACCGGGAAAAA CGCCCCGGTGCGC GCA GCGCACCCT-ACG ATGGGGGCGGCCCCG TERM 1131 1536147 - 1536120 - T 73 -10.6 -3.57263 | gap 1 AGCTCTACCGGGAAA CGTCACGGTGCGC ACA GCGCACCCT-ACG GTGGGGACGCGGCTT Pmen_1371 1537117 - 1536233 - | 3-hydroxyisobutyrate dehydrogenase TERM 1132 1536417 - 1536458 + g 73 -9.4 -3.89695 | gap 2 AAACCACCGCTGTAG CCCTTGGACGCCGGGGCGTT CTCC ATCACCCCGG-G-CCAGGGG TTGTATTTCTCCAGC Pmen_1372 1537982 - 1537146 - | PEP phosphonomutase and related enzymes-like protein TERM 1133 1537942 - 1537958 + g 75 -4.3 -4.60889 | overlap 1537943 TCGCGTTGATGCAGG GCCTGGA AGG TCAGGGC TTTTTGCAACTGCTT Pmen_1373 1539217 - 1538114 - | enoyl-CoA hydratase/isomerase TERM 1134 1539349 - 1539359 + r 70 -4.6 -4.56597 | overlap 1539342 CATTTGTTGCGCCAC TGCG GGT CGCG TTTTTCCAGGAAGGC Pmen_1374 1540151 - 1539333 - | enoyl-CoA hydratase TERM 1135 1540303 - 1540254 - R 72 -13.6 -2.62184 | opp_overlap 1540250 1540293 1540297 GTCTGGTTCAGAGCA GGCGATCG-AGCATGCCGCCCTGC TGCA GCAGG-CGGCGCGCGACGATCACC CGCATGATCTCGTTG Pmen_1375 1541409 - 1540246 - | acyl-CoA dehydrogenase domain-containing protein Pmen_1376 1542663 - 1541416 - | extracellular ligand-binding receptor Pmen_1377 1544257 - 1542761 - | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 1136 1544498 - 1544511 + G 70 -2.3 -4.62069 | AGCTCGGGCTGCTAT CCCCT GGCC ATGGG TTTTTACCCTGACGC Pmen_1378 1544381 - 1545262 + | AraC family transcriptional regulator Pmen_1379 1545774 - 1545274 - | thioesterase superfamily protein Pmen_1380 1546597 - 1545785 - | putative signal transduction protein Pmen_1381 1546735 - 1547424 + | uracil-DNA glycosylase Pmen_1382 1548334 - 1547474 - | hypothetical protein TERM 1137 1548505 - 1548490 - R 100 -11.8 -6.09196 | opp_overlap 1548490 CGGAAAATAAAAAAA CCGCCC CGAA GGGCGG TTTCCATGTCGCAGG TERM 1138 1548490 - 1548505 + r 80 -11.8 -3.70902 | opp_overlap 1548490 CGGAAAATAAAAAAA CCGCCC CGAA GGGCGG TTTCCATGTCGCAGG Pmen_1383 1549228 - 1548527 - | ABC transporter related livG 1549999 - 1549232 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 1551267 - 1549996 - | leucine/isoleucine/valine transporter permease subunit Pmen_1386 1552187 - 1551264 - | inner-membrane translocator TERM 1139 1552071 - 1552055 - G 70 -10.1 -3.71794 | opp_overlap 1552055 AGCCAATCATGTAAA CCTCGCC ATG GGCGAAG TTGATCATGCCGATG TERM 1140 1552289 - 1552259 - R 100 -19.9 -4.15788 | opp_overlap 1552263, overlap 1552263 AATTCTTCTAATAAA CAAAGCCCACTGC TGGAG GCAGTGGGCTTTG GCTCAGACAGGAAGC TERM 1141 1552285 - 1552263 - R 100 -14.9 -4.67607 | opp_overlap 1552263, overlap 1552259 CTTCTAATAAACAAA GCCCACTGC TGGAG GCAGTGGGC TTTGGCTCAGACAGG TERM 1142 1552263 - 1552285 + r 93 -15.6 -3.64703 | opp_overlap 1552263 1552259 CTTCTAATAAACAAA GCCCACTGCT GGA GGCAGTGGGC TTTGGCTCAGACAGG Pmen_1387 1553426 - 1552305 - | extracellular ligand-binding receptor Pmen_1388 1553721 - 1554038 + | hypothetical protein Pmen_1389 1554131 - 1554499 + | hypothetical protein TERM 1143 1554551 - 1554534 - T 100 -11.3 -5.40072 | opp_overlap 1554534 TTCGGGCGAAAAAAA CCGGATC ATTC GATCCGG TTTTTTGTTTCATTC TERM 1144 1554534 - 1554551 + T 100 -11.3 -5.72053 | opp_overlap 1554534 TTCGGGCGAAAAAAA CCGGATC ATTC GATCCGG TTTTTTGTTTCATTC Pmen_1390 1554790 - 1554572 - | BFD/(2Fe-2S)-binding domain-containing protein TERM 1145 1554938 - 1554925 - R 100 -9.5 -5.21709 | opp_overlap 1554925 CCTGATATGAAAAAA CCGGC GTGC GCCGG TTTTTTCATGAGCGG TERM 1146 1554925 - 1554938 + r 100 -9.5 -5.14563 | opp_overlap 1554925 CCTGATATGAAAAAA CCGGC GTGC GCCGG TTTTTTCATGAGCGG Pmen_1391 1555635 - 1554961 - | ribonuclease T Pmen_1392 1556678 - 1555632 - | dihydroorotase TERM 1147 1556769 - 1556785 + H 71 -6.5 -4.24002 | overlap 1556778 AGGCAATTCGTTCGC CTTGGCG CTG CGCTGAG TTTTGCGCTTTCCCG Pmen_1393 1556872 - 1557819 + | OmpA/MotB domain-containing protein Pmen_1394 1557935 - 1559152 + | argininosuccinate synthase TERM 1148 1559172 - 1559202 + F 89 -12.5 -4.07568 | opp_overlap 1559178, overlap 1559175 1559178 CTGAGCGCCTTGTGA GACGAACCCCGGC CACAA GCCGGGGTTCTGC TTTTAGAAGAGGAAA TERM 1149 1559175 - 1559199 + F 87 -17.2 -3.08032 | opp_overlap 1559178, overlap 1559172 1559178 AGCGCCTTGTGAGAC GAACCCCGGC CACAA GCCGGGGTTC TGCTTTTAGAAGAGG TERM 1150 1559178 - 1559196 + F 82 -13.1 -3.68359 | opp_overlap 1559178, overlap 1559175 1559172 GCCTTGTGAGACGAA CCCCGGC CACAA GCCGGGG TTCTGCTTTTAGAAG TERM 1151 1559196 - 1559178 - f 78 -13.8 -3.25823 | opp_overlap 1559175 1559172 1559178 GCCTTGTGAGACGAA CCCCGGCC ACA AGCCGGGG TTCTGCTTTTAGAAG Pmen_1395 1559224 - 1559616 + | lactoylglutathione lyase Pmen_1396 1559686 - 1560756 + | diguanylate cyclase TERM 1152 1560792 - 1560759 - T 88 -14 -3.59979 | gap 1, opp_overlap 1560766, overlap 1560766 CGCGGTGAGCTGAAA CG-AAAAAGCCCCGC GGTTG GCGGGGCTTCTTGCG TGGCGCGATCAGATA TERM 1153 1560784 - 1560766 - T 100 -13.1 -4.99134 | opp_overlap 1560766, overlap 1560759 AGCTGAAACGAAAAA GCCCCGC GGTTG GCGGGGC TTCTTGCGTGGCGCG TERM 1154 1560766 - 1560784 + T 82 -13.1 -3.67597 | opp_overlap 1560766 1560759 AGCTGAAACGAAAAA GCCCCGC GGTTG GCGGGGC TTCTTGCGTGGCGCG Pmen_1397 1560980 - 1560801 - | hypothetical protein Pmen_1398 1561730 - 1561092 - | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III Pmen_1399 1562434 - 1561727 - | SoxR-reducing system protein RsxE Pmen_1400 1563066 - 1562431 - | electron transport complex, RnfABCDGE type, G subunit Pmen_1401 1564100 - 1563069 - | electron transport complex, RnfABCDGE type, D subunit Pmen_1402 1567074 - 1564240 - | electron transport complex protein RnfC TERM 1155 1565485 - 1565508 + g 70 -2.2 -4.64144 | overlap 1565497 CTGGGTCTGCAGCTC CGGCGTGTCG TGGG CGGCCAGCTG TTTTTCCGCCTTCTT TERM 1156 1566396 - 1566436 + g 81 -12.3 -3.8512 | GCACCTGGTAGCTGC GCTCGCTGCAGGCGCCGCG CAC CGCGGCGATGGCCTCGGGC TTGTTGTCCTCGATG TERM 1157 1567076 - 1567121 + r 73 -9.5 -3.95219 | gap 1, opp_overlap 1567104 TCCTGCGCGCTCATG CCGCCTGCTCCCGGTC-GCTGG CGA TCAACTGGCCGGGCGCCAGCGG TTTGTCCCATTTCCA Pmen_1403 1567646 - 1567071 - | electron transport complex protein RnfB Pmen_1404 1568227 - 1567643 - | electron transport complex, RnfABCDGE type, A subunit TERM 1158 1568319 - 1568298 - R 95 -15.9 -3.70902 | opp_overlap 1568301 1568314, overlap 1568301 GCGCGTAGATGCAAA CAAGCCGGC ATTG GCCGGCTTG TTCGACGATCTCGAG TERM 1159 1568301 - 1568316 + r 77 -11.8 -3.63073 | opp_overlap 1568298 1568301, overlap 1568314 CGTAGATGCAAACAA GCCGGC ATTG GCCGGC TTGTTCGACGATCTC TERM 1160 1568316 - 1568301 - R 82 -11.8 -3.98913 | opp_overlap 1568301 1568314, overlap 1568298 CGTAGATGCAAACAA GCCGGC ATTG GCCGGC TTGTTCGACGATCTC metG 1570383 - 1568347 - | methionyl-tRNA synthetase Pmen_1406 1570568 - 1571656 + | hypothetical protein TERM 1161 1571677 - 1571659 - T 71 -5.8 -4.3129 | opp_overlap 1571661, overlap 1571662 CAGTGAGGATTAAAA GCAGCCGC GCA GCGGCATC TGATGACCCTCTCCC TERM 1162 1572134 - 1572156 + T 80 -10.5 -4.07885 | opp_overlap 1572136, overlap 1572136 CAAACACCCATAAAA AAGCCCCGC ACTAG GCGGGGCTC TTTTCAAGCGGGGTA TERM 1163 1572136 - 1572154 + T 82 -13.1 -3.63744 | opp_overlap 1572136, overlap 1572134 AACACCCATAAAAAA GCCCCGC ACTAG GCGGGGC TCTTTTCAAGCGGGG TERM 1164 1572154 - 1572136 - T 100 -13.1 -5.30686 | opp_overlap 1572136 1572134 AACACCCATAAAAAA GCCCCGC ACTAG GCGGGGC TCTTTTCAAGCGGGG Pmen_1407 1572388 - 1572179 - | cold-shock DNA-binding protein family protein dcd 1572690 - 1573256 + | deoxycytidine triphosphate deaminase TERM 1165 1573303 - 1573271 - f 80 -10.5 -4.10007 | opp_overlap 1573279, overlap 1573279 ACAACCGCGGGAAAA TGGAAGAAGCCGGGC ATT GCCCGGCTTTTTCGT ATCCGGCTCATGGCG TERM 1166 1573279 - 1573295 + F 100 -15.1 -4.8048 | opp_overlap 1573271 1573279 GGGAAAATGGAAGAA GCCGGGC ATT GCCCGGC TTTTTCGTATCCGGC TERM 1167 1573295 - 1573279 - f 93 -15.1 -3.81879 | opp_overlap 1573279, overlap 1573271 GGGAAAATGGAAGAA GCCGGGC ATT GCCCGGC TTTTTCGTATCCGGC Pmen_1409 1573393 - 1573605 + | hypothetical protein TERM 1168 1573648 - 1573690 + T 87 -17 -3.06796 | opp_overlap 1573661, overlap 1573654 1573657 1573658 CTGGTCGGACGGTGC CGAATGCGAAGAAGCCGGGC AAT GCCCGGCTTCCTGGTTTTCG TTGCCTGCGATCAGG TERM 1169 1573654 - 1573684 + T 100 -15.4 -4.43477 | opp_overlap 1573661, overlap 1573648 1573657 1573658 GGACGGTGCCGAATG CGAAGAAGCCGGGC AAT GCCCGGCTTCCTGG TTTTCGTTGCCTGCG TERM 1170 1573657 - 1573681 + T 85 -15.7 -3.1867 | opp_overlap 1573661, overlap 1573654 1573648 1573658 CGGTGCCGAATGCGA AGAAGCCGGGC AAT GCCCGGCTTCC TGGTTTTCGTTGCCT TERM 1171 1573658 - 1573680 + T 88 -19.2 -2.50479 | opp_overlap 1573661, overlap 1573657 1573654 1573648 GGTGCCGAATGCGAA GAAGCCGGGC AAT GCCCGGCTTC CTGGTTTTCGTTGCC TERM 1172 1573677 - 1573661 - T 90 -15.1 -3.68222 | opp_overlap 1573658 1573657 1573654 1573648 GCCGAATGCGAAGAA GCCGGGC AAT GCCCGGC TTCCTGGTTTTCGTT nadE 1574528 - 1573701 - | NAD synthetase TERM 1173 1573909 - 1573940 + g 86 -16.6 -3.53012 | gap 1, overlap 1573910 AGATGTTGTGGCGCG C-CCAGGTGCGCGGC GAT GGCGCGCACCTGGTG TTTAACCAGACCCGA TERM 1174 1573910 - 1573938 + g 100 -20.3 -3.34398 | overlap 1573909 GATGTTGTGGCGCGC CCAGGTGCGCGGC GAT GGCGCGCACCTGG TGTTTAACCAGACCC Pmen_1411 1575738 - 1574539 - | nicotinate phosphoribosyltransferase Pmen_1412 1576379 - 1575735 - | isochorismatase hydrolase TERM 1175 1576400 - 1576442 + H 93 -8.6 -5.00616 | opp_overlap 1576414, overlap 1576401 GCTCCTCTCTGCGCT TGGATGTCTACATATTTCAT CTG ATGAAATATGTAGTCAAGCG TTTTTTCAGGGAAGC TERM 1176 1576401 - 1576441 + H 73 -9.9 -3.60048 | opp_overlap 1576414, overlap 1576400 CTCCTCTCTGCGCTT GGATGTCTACATATTTCAT CTG ATGAAATATGTAGTCAAGC GTTTTTTCAGGGAAG Pmen_1413 1576520 - 1577209 + | NUDIX hydrolase TERM 1177 1577258 - 1577241 - T 100 -7.7 -5.40072 | gap 1, opp_overlap 1577253, overlap 1577243 CTGCGGGCAAAAAAA TAGGCGCC AGA GGCGCC-A GGAGCTTTGCAACAC TERM 1178 1577257 - 1577243 - T 100 -12.8 -4.34482 | opp_overlap 1577253, overlap 1577241 GCGGGCAAAAAAATA GGCGCC AGA GGCGCC AGGAGCTTTGCAACA TERM 1179 1577386 - 1577372 - T 100 -9.2 -5.11836 | ACAGGCAAAAGAAAA GGCGCC AGA AGCGCC TTAAACGATGATCTA Pmen_1414 1579981 - 1577468 - | penicillin amidase TERM 1180 1579614 - 1579632 + g 78 -6.6 -4.68103 | CGCGGTGAGGCGTCG GCGTAGAG GAA CTCCGCGC TTTTCTTCAGGTTCA Pmen_1415 1580617 - 1580153 - | hypothetical protein TERM 1181 1580471 - 1580511 + g 95 -16.8 -3.78775 | gap 1, overlap 1580470 1580464 GATGTTCAGGTCACC GCCGAGCCGCTGCCG-GCG TTCC TGCTCGGCGGCGGCCTGGC TTTCCTGCTGCGCCC Pmen_1416 1580816 - 1580625 - | SecC motif-containing protein Pmen_1417 1581319 - 1580822 - | water stress/hypersensitive response protein TERM 1182 1581813 - 1581787 - g 74 -12.2 -3.53012 | CGCCTCCGCTCGAAA CGGCCGGCGC ACCGGTG GTGCCGGCCG CAGCGCCCAGGCCGG Pmen_1418 1581513 - 1582067 + | hypothetical protein TERM 1183 1582133 - 1582112 - T 72 -11.5 -3.33815 | opp_overlap 1582112, overlap 1582113 ACTGGCTTGAAGGAA CGCCGCGAC GTCG GCCGCGGCA TTCGCTCCGCTTAGC Pmen_1419 1583297 - 1582176 - | hypothetical protein Pmen_1420 1583846 - 1583364 - | hypothetical protein Pmen_1421 1584348 - 1583851 - | hypothetical protein Pmen_1422 1584512 - 1585144 + | OmpA/MotB domain-containing protein TERM 1184 1585160 - 1585200 + F 100 -22.6 -3.84406 | opp_overlap 1585121 1585167, overlap 1585162 1585191 GCCGGGGTAATGCCT GAGCAGAGCCCGCCCGGC CACAA GCCGCGCGGGCTCTGCTG TTCTTGTGCTCAAGC TERM 1185 1585162 - 1585198 + F 100 -25.2 -3.50808 | opp_overlap 1585121 1585167, overlap 1585160 1585191 CGGGGTAATGCCTGA GCAGAGCCCGCCCGGC CACAA GCCGCGCGGGCTCTGC TGTTCTTGTGCTCAA TERM 1186 1585193 - 1585167 - f 84 -17.2 -2.79133 | opp_overlap 1585162 1585160 1585191, overlap 1585121 TAATGCCTGAGCAGA GCCCGCCCGGCC ACA AGCCGCGCGGGC TCTGCTGTTCTTGTG Pmen_1423 1585276 - 1586010 + | OmpA/MotB domain-containing protein TERM 1187 1586013 - 1586055 + F 72 -12 -3.28924 | gap 1, opp_overlap 1586015 1586018, overlap 1586014 CGTTTCCCGTTGAGC AACGAGCGTGCCTCGGACC GGGGAG GGTCTGAGGCACGC-CGCC TTGTCGCCAGGCGTA TERM 1188 1586014 - 1586054 + F 78 -15.5 -2.57211 | gap 1, opp_overlap 1586015 1586018, overlap 1586013 GTTTCCCGTTGAGCA ACGAGCGTGCCTCGGACC GGGGAG GGTCTGAGGCACGC-CGC CTTGTCGCCAGGCGT TERM 1189 1586053 - 1586015 - f 89 -16.8 -3.14132 | gap 1, opp_overlap 1586014 1586013, overlap 1586018 TTTCCCGTTGAGCAA CGAGCGTGCCTCGGACC GGGGAG GGTCTGAGGCACGC-CG CCTTGTCGCCAGGCG TERM 1190 1586051 - 1586018 - f 86 -18.2 -2.77899 | opp_overlap 1586014 1586013, overlap 1586015 CCCGTTGAGCAACGA GCGTGCCTCGGACC GGGGAG GGTCTGAGGCACGC CGCCTTGTCGCCAGG TERM 1191 1586117 - 1586089 - g 70 -2.2 -4.68424 | overlap 1586090 GAAGTCATGCAAAAA CGCCCTCCAGAC TGGTG GTCCGGGCCGCG AGCGGTTAACGTGCT Pmen_1424 1586080 - 1586469 + | hypothetical protein Pmen_1425 1586462 - 1587223 + | hypothetical protein Pmen_1426 1587706 - 1587242 - | integral membrane protein-like protein dinG 1587846 - 1589990 + | ATP-dependent DNA helicase DinG Pmen_1428 1590333 - 1589992 - | monovalent cation/proton antiporter, MnhG/PhaG subunit Pmen_1429 1590641 - 1590330 - | multiple resistance and pH regulation protein F Pmen_1430 1591135 - 1590638 - | cation antiporter Pmen_1431 1592631 - 1591135 - | NADH dehydrogenase (quinone) TERM 1192 1591678 - 1591651 - G 80 -14.8 -3.39595 | overlap 1591644 GTGAATCAGGTAGAA CACCGCGCCGGC CAGG GCCAGCGGGGTG GCCAGAGCGAGGCCG Pmen_1432 1593032 - 1592628 - | NADH-ubiquinone oxidoreductase, chain 4L Pmen_1433 1595752 - 1593032 - | NADH dehydrogenase (quinone) TERM 1193 1595847 - 1595871 + H 83 -5 -5.02074 | gap 2, opp_overlap 1595839, overlap 1595821 1595847 GGTAAAGGGCGCATG GCG-GGCC-GGT CAT ATCAGGCCGCGC TTTTTTCCAGCATAG Pmen_1434 1595992 - 1597137 + | beta-lactamase Pmen_1435 1597220 - 1597873 + | OmpA/MotB domain-containing protein TERM 1194 1597980 - 1597945 - g 75 -15.4 -2.78384 | gap 1, opp_overlap 1597944 TGCGCCGCGACTACA CCCGCGACGGCCTGAGC GAA GCCCAGGCC-CCGCTGG ATCCCTTTACCCTGT Pmen_1436 1597908 - 1598555 + | pyridoxamine 5'-phosphate oxidase TERM 1195 1598626 - 1598601 - f 76 -12.5 -3.34043 | overlap 1598602 GCGATCAGCCTACAA TGGCGGCCTCA CCCG CGAGGCCGCCT GCATGCTCGAACTCG TERM 1196 1598625 - 1598602 - f 78 -16 -2.60212 | overlap 1598601 CGATCAGCCTACAAT GGCGGCCTCA CCCG CGAGGCCGCC TGCATGCTCGAACTC Pmen_1437 1598629 - 1599744 + | CdaR family transcriptional regulator Pmen_1438 1599939 - 1601306 + | gluconate transporter TERM 1197 1601317 - 1601344 + F 73 -9.8 -3.62518 | gap 1, overlap 1601319 1601341 TGTAATCCGCTTTAT CG-GCGGGCGACC TCG GGTCGTCCGCTCC TTTCGAGGTGTTTCA TERM 1198 1601319 - 1601341 + F 85 -17 -2.92439 | overlap 1601317 TAATCCGCTTTATCG GCGGGCGACC TCG GGTCGTCCGC TCCTTTCGAGGTGTT TERM 1199 1602029 - 1602041 + G 78 -10.5 -4.08767 | TTGCCGAGCTGGATA CGGCC CTC GGCCG TTTTGCACGCATCGC Pmen_1439 1601362 - 1602504 + | glycerate kinase Pmen_1440 1602629 - 1603090 + | 17 kDa surface antigen TERM 1200 1603103 - 1603130 + F 100 -15.6 -5.28176 | TGAGCGCGGCCCAGA GCCGGAGTAGCT GCAG GGCTGCTCCGGC TTTTTTATGCCTGCC TERM 1201 1603210 - 1603198 - f 80 -3.3 -5.03314 | GCCATTGGTAAAAAA GCTTG GTA CATGC CTGTTGCCGCAGCCT Pmen_1441 1603470 - 1606262 + | putative monovalent cation/H+ antiporter subunit A Pmen_1442 1606264 - 1606593 + | putative monovalent cation/H+ antiporter subunit C TERM 1202 1607560 - 1607580 + G 73 -13.9 -3.11316 | TTGCCATCGGCACCG CCGCGGCGC TGA GCGCCGCGC TCTATTACCTGGTGC Pmen_1443 1606590 - 1608095 + | putative monovalent cation/H+ antiporter subunit D Pmen_1444 1608092 - 1608589 + | cation antiporter Pmen_1445 1608574 - 1608843 + | multiple resistance and pH regulation protein F Pmen_1446 1608856 - 1609194 + | putative monovalent cation/H+ antiporter subunit G Pmen_1447 1609289 - 1610194 + | hypothetical protein Pmen_1448 1610211 - 1610723 + | GCN5-related N-acetyltransferase Pmen_1449 1610720 - 1611124 + | hypothetical protein Pmen_1450 1612734 - 1611121 - | FAD dependent oxidoreductase Pmen_1451 1613827 - 1612820 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1203 1613978 - 1613950 - R 87 -16.7 -3.03771 | opp_overlap 1613942, overlap 1613966 CGACAGCCTGGAAGA GGCTGGCGCCAGA GCA TCCGGCGCCAGCG CGGGCGGTCAGTTGC Pmen_1452 1614654 - 1613986 - | membrane protein-like protein Pmen_1453 1614880 - 1615761 + | pseudouridine synthase TERM 1204 1615854 - 1615838 - T 100 -10.8 -5.60993 | opp_overlap 1615853 GGCGTCATAAAAAAA GCCCGC ACGAG GCGGGC TAAGTGTGGCGTTTG Pmen_1454 1616876 - 1615854 - | putative ammonia monooxygenase TERM 1205 1615972 - 1615914 - G 81 -11.8 -4.02456 | gap 3, overlap 1615916 AAACATCACCAGAAA CAGCCGCAGCACCTGCAG-TG-CGGTGAC CAGC GCCACCGACAGCTGCAG-CGCCTCGGCGG TCAGGCACAGCTCGG TERM 1206 1615970 - 1615916 - G 77 -13 -3.59266 | gap 3, overlap 1615914 ACATCACCAGAAACA GCCGCAGCACCTGCAG-TG-CGGTGAC CAGC GCCACCGACAGCTGCAG-CGCCTCGGC GGTCAGGCACAGCTC TERM 1207 1616817 - 1616797 - G 78 -14 -3.61356 | ACCATCCACGGCAAA GGCCAGCC GGCGA GGCTGGCC AGGTAGCCGCCGACC Pmen_1455 1618380 - 1616860 - | hypothetical protein Pmen_1456 1618825 - 1618382 - | hypothetical protein Pmen_1457 1619869 - 1618892 - | hypothetical protein Pmen_1458 1621166 - 1619901 - | outer membrane porin TERM 1208 1621771 - 1621823 + G 89 -18.4 -2.8547 | gap 1 GAGGCGCGGGTCAAG GCGCTGCTGCGTCGCAGCGTGCTCG GCGG CGAGCA-GCTGCAGCGCTGCGGCGA TCTGGTCTACGACCT Pmen_1459 1621432 - 1622103 + | two component transcriptional regulator TERM 1209 1622108 - 1622150 + G 73 -13.3 -3.28684 | overlap 1622107 TCGAGGCATGAGCCG CAGCGTCAGCCTGCGCGGC CGCCT GCTGCGGCGCCTGGCGCTG TTGCTGTCGCTGATT Pmen_1460 1622100 - 1623497 + | integral membrane sensor signal transduction histidine kinase Pmen_1461 1624235 - 1623480 - | extracellular solute-binding protein TERM 1210 1624273 - 1624298 + r 79 -9.7 -4.2558 | GACCTGAGTGTAGAG GCGGTTTGCCA TCCG TGGCGAGTCGC TTTTACTGCAGCATG Pmen_1462 1625137 - 1624301 - | putative signal transduction protein Pmen_1463 1626125 - 1625184 - | GcvT-like aminomethyltransferase Pmen_1464 1626271 - 1626525 + | hypothetical protein TERM 1211 1626884 - 1626916 + G 86 -18.3 -3.13475 | TGCATCGCGCGCGAC GCGCTGGCGCCGGAG CAG CATCGGCGCCTGCGC TTGCGTCTGAAGTTC Pmen_1465 1626509 - 1626976 + | hypothetical protein Pmen_1466 1628561 - 1626930 - | L-aspartate oxidase algU 1628939 - 1629520 + | RNA polymerase sigma factor AlgU Pmen_1468 1629551 - 1630126 + | anti sigma-E protein, RseA Pmen_1469 1630135 - 1631082 + | sigma E regulatory protein, MucB/RseB Pmen_1470 1631079 - 1631534 + | positive regulator of sigma E, RseC/MucC Pmen_1471 1631570 - 1632994 + | protease Do TERM 1212 1633010 - 1633039 + F 70 -12.1 -2.87344 | opp_overlap 1633015, overlap 1633013 1633016 ATCGCGGCGCAGGTC AGACAGGGGCGCT TTCG GGCGCCCTTGTCA TGTGTGCGGCCGGTG TERM 1213 1633016 - 1633033 + F 70 -10.5 -3.49777 | opp_overlap 1633015, overlap 1633013 1633010 GCGCAGGTCAGACAG GGGCGCT TTCG GGCGCCC TTGTCATGTGTGCGG TERM 1214 1634146 - 1634164 + G 74 -10.2 -3.77241 | opp_overlap 1634144 ACATGCCGGAAAGCT CCGATGCC CTG GGCTTCGG TTTCCGTTGCGGTTT Pmen_1472 1633146 - 1634945 + | GTP-binding protein LepA Pmen_1473 1634952 - 1635806 + | signal peptidase I TERM 1215 1636180 - 1636170 - g 72 -6.8 -4.19577 | GAAGGTGGAAAACAA CGAG TTC CTCG TCCACCTCAAATATG TERM 1216 1636211 - 1636201 - g 76 -2.4 -4.93696 | opp_overlap 1636207, overlap 1636203 CTCAAATATGAAAAA CGCG AGC CGCT GATCGAGAACCTCGA Pmen_1474 1635895 - 1636272 + | hypothetical protein TERM 1217 1636476 - 1636525 + G 72 -12 -3.57144 | gap 1, opp_overlap 1636496 GGTCAGCTGTCGCGC CTGCGCGCCCGCCTAGTCAAGGG CGAGA CCCT-GGCCGTGCTGGCGCGCGG TTTCGAGCTGGGCGA TERM 1218 1636765 - 1636738 - g 84 -17 -3.08283 | overlap 1636727 ACAAGGATCCGAAGA CGCGCCTGCAGG AGTT CCTGCAGTCGCG CGCCTGCGAACTGCC TERM 1219 1636880 - 1636865 - g 72 -5.4 -4.4078 | gap 1, overlap 1636867 CCTGCTCAATGAAAA GACCCTG GGC CAGGG-C GGCAGCCGGCGTATC TERM 1220 1636879 - 1636867 - g 71 -9.1 -3.8125 | overlap 1636865 TGCTCAATGAAAAGA CCCTG GGC CAGGG CGGCAGCCGGCGTAT rnc 1636269 - 1636958 + | ribonuclease III era 1636951 - 1637850 + | GTP-binding protein Era TERM 1221 1637855 - 1637890 + F 76 -12.5 -3.33737 | overlap 1637856 ACCTGGATTGATCGC GGCGCCATGCGCATC CTCGGT GTTGCGCGTGGCGCA TTCTGGCGGTTACTG TERM 1222 1637856 - 1637889 + F 78 -16 -2.59921 | overlap 1637855 CCTGGATTGATCGCG GCGCCATGCGCATC CTCGGT GTTGCGCGTGGCGC ATTCTGGCGGTTACT recO 1637908 - 1638597 + | DNA repair protein RecO Pmen_1478 1638590 - 1639336 + | pyridoxal phosphate biosynthetic protein PdxJ Pmen_1479 1640324 - 1639440 - | LysR family transcriptional regulator Pmen_1480 1640442 - 1640705 + | hypothetical protein Pmen_1481 1641701 - 1640733 - | putative methyltransferase Pmen_1482 1642441 - 1641698 - | putative methyltransferase Pmen_1483 1643180 - 1642542 - | YhhN family protein TERM 1223 1643285 - 1643258 - H 79 -12.7 -3.53811 | GCGACGGGCGCCAAA TCGAGGGGCGG ATCGTG CCGCCACTCGA CGCCGCCGGCGGTAT Pmen_1484 1643334 - 1644569 + | RNA polymerase ECF-subfamily sigma factor Pmen_1485 1647502 - 1644659 - | ATP-dependent helicase HepA Pmen_1486 1647676 - 1647969 + | hypothetical protein Pmen_1487 1648005 - 1648604 + | DNA-N1-methyladenine dioxygenase Pmen_1488 1648601 - 1648762 + | hypothetical protein Pmen_1489 1648964 - 1649080 + | hypothetical protein TERM 1224 1649114 - 1649131 + F 100 -12.7 -5.95539 | opp_overlap 1649111 CACGCAAGGCAATTT GGGCGAC TTCG GTCGCCC TTTTTTTGTTTCCGC Pmen_1490 1649294 - 1651282 + | fusaric acid resistance protein region Pmen_1491 1651269 - 1651472 + | hypothetical protein Pmen_1492 1651487 - 1652341 + | secretion protein HlyD family protein TERM 1225 1652378 - 1652342 - T 76 -12.1 -3.32022 | CGGGTGATAGAGTAA GGGGGGCGGACGCCGCT GGT AGCGGCGTCCGCGGGGC TCAGCCGACAGTCAC Pmen_1493 1652849 - 1652379 - | dehydratase Pmen_1494 1653826 - 1652846 - | alpha/beta hydrolase fold Pmen_1495 1654172 - 1655860 + | acyl-CoA synthetase TERM 1226 1655868 - 1655894 + F 100 -21.6 -3.87576 | overlap 1655834 TCGCCTGATGTCCGA GCCCCTCCGCCG TTC TGGCGGAGGGGC TTTCCCTTCTTCTGC Pmen_1496 1656266 - 1657954 + | acyl-CoA synthetase TERM 1227 1657968 - 1657999 + T 100 -16.6 -4.13945 | opp_overlap 1657976, overlap 1657969 GATTCGCTAGCTGCT TTCGAGAACCCCGC TTCG GCGGGGTTCTCGCG TTTTGGAGTCACGAT TERM 1228 1657969 - 1657998 + T 89 -17.9 -3.08046 | opp_overlap 1657976, overlap 1657968 ATTCGCTAGCTGCTT TCGAGAACCCCGC TTCG GCGGGGTTCTCGC GTTTTGGAGTCACGA TERM 1229 1657991 - 1657976 - T 72 -11.8 -3.28791 | opp_overlap 1657969 1657968 AGCTGCTTTCGAGAA CCCCGC TTCG GCGGGG TTCTCGCGTTTTGGA Pmen_1497 1659643 - 1658468 - | major facilitator transporter Pmen_1498 1660542 - 1659640 - | hypothetical protein Pmen_1499 1660628 - 1661128 + | MarR family transcriptional regulator Pmen_1500 1661244 - 1661546 + | ArsR family transcriptional regulator Pmen_1501 1661695 - 1662669 + | alcohol dehydrogenase Pmen_1502 1662714 - 1663058 + | antibiotic biosynthesis monooxygenase Pmen_1503 1663342 - 1663599 + | hypothetical protein TERM 1230 1663607 - 1663632 + T 85 -9.7 -4.65895 | gap 1, opp_overlap 1663605 GGCACTGACACGATC CCAGGG-GCGTC CAA GAGGCGCCCTGG TTTTTCAATCACCGC Pmen_1504 1664095 - 1663652 - | LysR family transcriptional regulator TERM 1231 1665055 - 1665079 + G 75 -13.5 -3.46602 | ACCGTATTGATGCGC TGGCCGCTGCC GGC GGCCGTGGCCA TTCTGATCTGGGGCA Pmen_1505 1664176 - 1665363 + | major facilitator transporter TERM 1232 1665793 - 1665769 - g 73 -4.1 -4.60924 | overlap 1665771 GAAATTCCTGAAAAA GTTGGCGGAGC AGG GCTATGCCCAC CACACGATCCTCCAA Pmen_1506 1665596 - 1666585 + | hypothetical protein TERM 1233 1666659 - 1666694 + T 100 -21.2 -3.18383 | gap 1 CAACTCCGTCCGCAA CGCCTGATGCCCGCCGC CTA GCGGCGAGCA-CAGGCG TTGGTGGATGCGGCT Pmen_1507 1666937 - 1666635 - | hypothetical protein TERM 1234 1667583 - 1667563 - R 95 -14.7 -4.09685 | opp_overlap 1667561 1667560 TGCTATCGGCCAAAA GCGGACGCC TGG AGCGTCCGC CGATTGTGGGTCATC Pmen_1508 1668190 - 1667594 - | NADP oxidoreductase, coenzyme F420-dependent Pmen_1509 1668954 - 1668202 - | short-chain dehydrogenase/reductase SDR TERM 1235 1668474 - 1668452 - G 70 -9.8 -3.68529 | AGCCCACGACTGAAA CCGGCCAAGG CGC CCTTGGTCAG GGTGTAGGCGGAGGC TERM 1236 1668790 - 1668829 + g 80 -15 -3.37796 | opp_overlap 1668792 1668805, overlap 1668791 GCCACCGGCGGCAAC TATCTCGCCGACCAATGC CTCG GCCTTGGTCGGCGAGGCG TTGTAGGTGATGGCG TERM 1237 1668791 - 1668828 + g 77 -16.3 -2.62463 | opp_overlap 1668792 1668805, overlap 1668790 CCACCGGCGGCAACT ATCTCGCCGACCAATGC CTCG GCCTTGGTCGGCGAGGC GTTGTAGGTGATGGC TERM 1238 1668827 - 1668792 - G 85 -17.6 -2.71144 | opp_overlap 1668791 1668790, overlap 1668805 CACCGGCGGCAACTA TCTCGCCGACCAATGC CTCG GCCTTGGTCGGCGAGG CGTTGTAGGTGATGG TERM 1239 1669060 - 1669034 - H 79 -12.4 -3.48342 | opp_overlap 1669035 1669037, overlap 1669035 1669037 AAGTAATGACTAGAA TCACCTTCAATC AAT GATTGAAGGTGT GTCTATGGAGACCTT TERM 1240 1669059 - 1669035 - H 78 -15.9 -2.68282 | opp_overlap 1669035 1669037, overlap 1669034 1669037 AGTAATGACTAGAAT CACCTTCAATC AAT GATTGAAGGTG TGTCTATGGAGACCT TERM 1241 1669035 - 1669059 + H 83 -15.9 -2.98942 | opp_overlap 1669035 1669034 1669037, overlap 1669037 AGTAATGACTAGAAT CACCTTCAATC AAT GATTGAAGGTG TGTCTATGGAGACCT TERM 1242 1669037 - 1669057 + H 72 -12.7 -3.05022 | opp_overlap 1669037 1669035 1669034, overlap 1669035 TAATGACTAGAATCA CCTTCAATC AAT GATTGAAGG TGTGTCTATGGAGAC TERM 1243 1669057 - 1669037 - H 70 -12.7 -2.87957 | opp_overlap 1669035 1669037, overlap 1669035 1669034 TAATGACTAGAATCA CCTTCAATC AAT GATTGAAGG TGTGTCTATGGAGAC Pmen_1510 1669065 - 1670003 + | LysR family transcriptional regulator TERM 1244 1673159 - 1673134 - g 70 -2.5 -4.6468 | TGAAAGCATAGAAAA CCACCTGAAGA TGAA TATCGAGGTGG TGGATGCGCGCGGCA TERM 1245 1673947 - 1673899 - g 78 -15.2 -3.29144 | gap 1, opp_overlap 1673896 GCAGCGCCTGGACAA GGTCGGCGCGCAGGTGCAG-CGC GACC GCGTCTGGACCGGCGAGCTGACC GGCTATTGGGAGCAG Pmen_1511 1670120 - 1674136 + | ATP-dependent helicase HrpA Pmen_1512 1674185 - 1675630 + | lysophospholipase-like protein Pmen_1514 1677387 - 1676053 - | GntR family transcriptional regulator Pmen_1515 1677471 - 1678085 + | ThiJ/PfpI domain-containing protein Pmen_1516 1678151 - 1678678 + | hypothetical protein Pmen_1517 1679932 - 1678733 - | major facilitator transporter TERM 1246 1678905 - 1678879 - G 85 -18.1 -2.70932 | CTGCCTGCGCAACGA GCATGGGCCTG GCGAG CAGGCCCATGC GCGCGCCATAACCGG Pmen_1518 1681069 - 1679996 - | arsenical-resistance protein Pmen_1519 1681176 - 1681952 + | ArsR family transcriptional regulator Pmen_1520 1682044 - 1682766 + | NADPH-dependent FMN reductase Pmen_1521 1682785 - 1683285 + | dual specificity protein phosphatase Pmen_1522 1683299 - 1684303 + | glyceraldehyde-3-phosphate dehydrogenase Pmen_1523 1684499 - 1685725 + | major facilitator transporter TERM 1247 1685765 - 1685744 - f 72 -11.5 -3.40403 | opp_overlap 1685735, overlap 1685745 1685747 GCGCTTTCACGAGAA TGACGGCGC GCCA GCGCCGTCG AACTCAGAGCCTTTG TERM 1248 1685764 - 1685745 - f 76 -15 -2.64099 | opp_overlap 1685735, overlap 1685744 1685747 CGCTTTCACGAGAAT GACGGCGC GCCA GCGCCGTC GAACTCAGAGCCTTT TERM 1249 1685937 - 1685923 - g 83 -3.4 -5.24799 | GGATAAACAGAAAAA GCGCGC TCA ACGGGC CAAGACCAAGGCCAG Pmen_1524 1685897 - 1686376 + | hypothetical protein Pmen_1525 1686556 - 1687866 + | CitMHS family citrate/H+ symporter TERM 1250 1687917 - 1687889 - T 100 -21.1 -3.36273 | opp_overlap 1687889 GCGCGCGAATAGGAA CGCCGCCAATCCC TGA AGGATTGGCGGCG TTTTCATATGCGCCA TERM 1251 1687889 - 1687917 + T 100 -20.4 -4.34402 | opp_overlap 1687889 GCGCGCGAATAGGAA CGCCGCCAATCC CTGAA GGATTGGCGGCG TTTTCATATGCGCCA Pmen_1526 1688528 - 1687971 - | periplasmic protein-like protein Pmen_1527 1689793 - 1688594 - | major facilitator transporter Pmen_1528 1690792 - 1689869 - | LysR family transcriptional regulator TERM 1252 1692053 - 1692021 - g 72 -5.5 -4.4261 | gap 1, opp_overlap 1692051, overlap 1692049 CGGCGAAGAGGAAAA GCGCGGCCCCCTGG GGCTGG CCAAGGTACCG-GC TGCCGCGGCGGATGC Pmen_1529 1691143 - 1692129 + | short-chain dehydrogenase/reductase SDR TERM 1253 1693357 - 1693414 + G 73 -13.9 -3.1739 | overlap 1693356 CCTGCTGGACATGCT CGCCCAGGGCGCTTGGCTGGTGGCGCT GGTG GGCGCGGCCAGCGCGGCGCTGTGGGGG TTGCTCGGCTGGTAT Pmen_1530 1692176 - 1693492 + | major facilitator transporter Pmen_1531 1694250 - 1693549 - | glutathione S-transferase domain-containing protein Pmen_1532 1694426 - 1694863 + | histidine triad (HIT) protein TERM 1254 1694907 - 1694866 - T 100 -20.3 -3.60792 | gap 1, opp_overlap 1694872, overlap 1694869 1694872 TCTGCAAGCCTGAAA CGA-CAATGCCCCGGTCGCA TGA TGCGGCCGGGGCATTGCTCA GCGTGCGGCTCAACC TERM 1255 1694903 - 1694869 - T 100 -24.4 -2.92667 | opp_overlap 1694872, overlap 1694866 1694872 GCAAGCCTGAAACGA CAATGCCCCGGTCGCA TGA TGCGGCCGGGGCATTG CTCAGCGTGCGGCTC TERM 1256 1694900 - 1694872 - T 100 -20.3 -3.60419 | opp_overlap 1694872, overlap 1694869 1694866 AGCCTGAAACGACAA TGCCCCGGTCGCA TGA TGCGGCCGGGGCA TTGCTCAGCGTGCGG TERM 1257 1694872 - 1694900 + T 100 -22.5 -3.15544 | opp_overlap 1694872 1694869 1694866 AGCCTGAAACGACAA TGCCCCGGTCGCA TGA TGCGGCCGGGGCA TTGCTCAGCGTGCGG Pmen_1533 1695183 - 1694917 - | hypothetical protein Pmen_1534 1695368 - 1695793 + | hypothetical protein Pmen_1535 1695874 - 1697142 + | monooxygenase, FAD-binding Pmen_1536 1697557 - 1697144 - | hypothetical protein Pmen_1537 1698149 - 1697676 - | hypothetical protein TERM 1258 1697715 - 1697727 + g 75 -9.1 -4.07568 | CAGCGGCTGGTCACT CCAGG CAA CCTGG TTTTCAGCGAACAGG TERM 1259 1698211 - 1698221 + r 78 -6.8 -4.60924 | overlap 1698220 TTATCTGAATTCCGC CCTC TTT GAGG TTTTTCAACCATTTC Pmen_1538 1698792 - 1698340 - | hypothetical protein Pmen_1539 1700156 - 1698795 - | hypothetical protein TERM 1260 1700248 - 1700268 + r 77 -3.1 -4.9218 | opp_overlap 1700229 1700226 TGCGCAAAGTCTTGC GCAGTGGCG GGC CGGCTTTGC TTTTTGTGATCCATG TERM 1261 1700314 - 1700334 + r 73 -9.7 -3.92373 | opp_overlap 1700298 1700297 CGTGGCGGTTCAGCC GCGCTGC AGCTCGA GCAGCGC TTTCTGGCTGAGGTC Pmen_1540 1701060 - 1700308 - | TPR repeat-containing protein TERM 1262 1700660 - 1700648 - G 75 -9.1 -4.10657 | TGACAGCCGGCAAAA TCGCC CAG GGCGA AGCGTGCGCGGGCCA TERM 1263 1701355 - 1701367 + G 75 -3.3 -4.72272 | GTTGTATGCGGACGT GACCT TGC AGGGC TTTTTCATCGCCACC Pmen_1541 1701203 - 1701769 + | nicotinamide mononucleotide transporter PnuC Pmen_1542 1701771 - 1702811 + | ATPase/kinase involved in NAD metabolism-like protein Pmen_1543 1703558 - 1702821 - | amino acid ABC transporter periplasmic protein TERM 1264 1702935 - 1702970 + g 75 -3.3 -4.72272 | gap 3, opp_overlap 1702934 CACGAGGCAGGAAAG CGCAT-CG-GCGCTGAGC TCG GC-CAGTGCACGCAGGCG TTTTTCCTCCGGCAG Pmen_1544 1705168 - 1703558 - | glutamate synthase (NADPH) TERM 1265 1703641 - 1703684 + g 73 -13.1 -3.2794 | gap 1, opp_overlap 1703665 CGATCTGGCCGCCGA GCAGTTCGCCCGGC-GCGAG GAACA CATGCTGCTGGGCGAACAGC TTGATCTCGGTGGCC TERM 1266 1704114 - 1704136 + g 73 -12.6 -3.35813 | overlap 1704115 TGATCGGTGAACTCC AGCGGCGCCG CGC CGGTGCCGCC TTCCTTGCCGTCGAC TERM 1267 1704115 - 1704135 + g 77 -16.1 -2.61274 | overlap 1704114 GATCGGTGAACTCCA GCGGCGCCG CGC CGGTGCCGC CTTCCTTGCCGTCGA TERM 1268 1705626 - 1705601 - g 70 -6.1 -4.25104 | gap 1, opp_overlap 1705600 1705601 CGTCGGGCATCAAAA GCCG-CTTCGTC ATC GACAAGGACGGC ATTCTCGATCCGCAG Pmen_1545 1705399 - 1706526 + | 3-oxoacyl-(acyl carrier protein) synthase III Pmen_1546 1706598 - 1707200 + | ECF subfamily RNA polymerase sigma-24 factor Pmen_1547 1707194 - 1707343 + | hypothetical protein Pmen_1548 1708936 - 1707374 - | transposase IS66 TERM 1269 1707867 - 1707879 + g 72 -6.9 -4.20354 | overlap 1707868 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_1549 1709315 - 1708956 - | IS66 Orf2 family protein Pmen_1550 1709578 - 1709312 - | hypothetical protein Pmen_1551 1710485 - 1709739 - | hypothetical protein Pmen_1552 1711286 - 1710624 - | hypothetical protein Pmen_1553 1711818 - 1712111 + | hypothetical protein TERM 1270 1712167 - 1712222 + G 90 -15.3 -3.87815 | gap 1, overlap 1712163 CCGGCGCCGGCCTCG GCCTGCGTCGCGGGCTGC-TCGCCGA GTTGA TCGGCGATGAGGCCAGCGGCGCCGAC TTTCTCGAAGTGGCG Pmen_1554 1712133 - 1712975 + | hypothetical protein Pmen_1555 1712972 - 1713682 + | hypothetical protein TERM 1271 1713710 - 1713743 + G 72 -5.3 -4.37092 | gap 2 CTTTGCTCAATCGCT TCCAGGACGCGCTGG AGGCTA CCCG-GCG-CCTGGA TTTTCTCGGCCCGCT Pmen_1556 1713688 - 1714287 + | DoxX family protein Pmen_1557 1715509 - 1714475 - | AraC family transcriptional regulator TERM 1272 1717051 - 1717013 - g 71 -13.9 -2.80816 | overlap 1717016 CGGGCAGCGACTACA CCACCGCCATG-GCGCGCT GGC AGCG-GCTCAAGGCGGCGG CCAGCCGCACCATCG TERM 1273 1717069 - 1717016 - g 71 -15.2 -2.66964 | gap 1, overlap 1717013 GCAGCGACTACACCA CCGCCATGGCGC-GCTGGCAGCGGC TCAAG GCGGCGGCCAGCCGCACCATCGCCG AGAATCGCGGCACCA Pmen_1558 1715635 - 1717230 + | FAD linked oxidase domain-containing protein Pmen_1559 1717233 - 1718804 + | FAD dependent oxidoreductase TERM 1274 1720095 - 1720065 - g 100 -18.2 -3.92373 | GAGCGCATCGAGAAA CGCGCCGGCACCCG TAT CGAGCGCCTGCGCG TGTCCGGTGGCGGTT Pmen_1560 1718850 - 1720409 + | carbohydrate kinase, FGGY TERM 1275 1720433 - 1720478 + T 89 -17 -3.14132 | gap 1 AAGGTGTCGTAGCAG CCGGCTTGCTGGCGAT-GCCG TGAAT CGATGATCGCCAGCAAGCTGG TTCCTACAAAAAAGA TERM 1276 1720518 - 1720492 - T 100 -12.3 -5.24129 | opp_overlap 1720490 1720494, overlap 1720494 GGTTCCTACAAAAAA GATCGCCCTCC TAAGC GGAGGGCGATT GGTTTGGCATCAGGC TERM 1277 1720516 - 1720494 - T 100 -14.9 -4.25873 | opp_overlap 1720490 1720494, overlap 1720492 TTCCTACAAAAAAGA TCGCCCTCC TAAGC GGAGGGCGA TTGGTTTGGCATCAG TERM 1278 1720494 - 1720516 + T 90 -14.9 -3.53031 | opp_overlap 1720494 1720492, overlap 1720490 TTCCTACAAAAAAGA TCGCCCTCC TAAGC GGAGGGCGA TTGGTTTGGCATCAG Pmen_1561 1721244 - 1720528 - | pirin domain-containing protein Pmen_1562 1721397 - 1722299 + | lipid kinase Pmen_1563 1722952 - 1722308 - | two component LuxR family transcriptional regulator TERM 1279 1722646 - 1722661 + g 77 -5.4 -4.58283 | gap 1 CGGCGTCCTTGAGCA GGTAGCC GTG GGC-ACC TTTTTGCAGGGCTTC Pmen_1564 1724257 - 1723190 - | response regulator receiver modulated CheB methylesterase TERM 1280 1723743 - 1723791 + g 76 -6.6 -4.56597 | gap 1, overlap 1723749 GTGGAGGTGCCCAGC GCCACCACGCGGTCGGTGGTG GTCAGGTG CACCGCCGG-CGCGCGCTCGC TTTTTGCCGGCGCGA Pmen_1565 1725089 - 1724280 - | protein-glutamate O-methyltransferase Pmen_1566 1725598 - 1725089 - | putative CheW protein TERM 1281 1725278 - 1725301 + g 71 -12.4 -3.23692 | GAGCACCGCGTCGAC CGCATCGACC ACCA GGCCGATGCG TTGCTGCTGCTCGTC Pmen_1567 1727252 - 1725609 - | methyl-accepting chemotaxis sensory transducer TERM 1282 1726325 - 1726339 + g 75 -11.4 -3.73224 | AGGCGGACATCTGTT CCACCG AGG CGGTGG TTTCCTCGACGCTGG TERM 1283 1726790 - 1726813 + g 77 -12.4 -3.64703 | CGCGGCGGGACAGCT CCGGCATCTG CGCG CTGATGCCGG TTTCCGTGGCCAGGG Pmen_1568 1729485 - 1727266 - | CheA signal transduction histidine kinase Pmen_1569 1729825 - 1729499 - | hypothetical protein Pmen_1570 1730192 - 1729827 - | response regulator receiver protein Pmen_1571 1731302 - 1730214 - | methyl-accepting chemotaxis sensory transducer TERM 1284 1731223 - 1731191 - G 100 -11.9 -4.56597 | GGGGGCGCTGAAAAA GCGCAGCCAGCGC ACTGATG GCGCAGCCTGCGC CGATCAGCCAGGGCA Pmen_1572 1731559 - 1732491 + | CheW protein TERM 1285 1732546 - 1732512 - f 85 -15.9 -3.14132 | gap 2, opp_overlap 1732500 CGTTTCCCGCATGAA CGCCGATGCAGGCGGGT GCA ACCCGCCTG-ATCG-CG GTCGCACGGCCCTTG Pmen_1573 1732647 - 1733453 + | MOSC domain-containing protein Pmen_1574 1735210 - 1733573 - | hypothetical protein TERM 1286 1735590 - 1735614 + r 93 -17.2 -3.36327 | AGGACTATGCTCGGT CCGCTGCAGG CTTGC CCTGCAGCGG TTGTCCATGGCCTCG Pmen_1575 1737655 - 1735673 - | lytic transglycosylase, catalytic TERM 1287 1738125 - 1738092 - g 72 -13.7 -3.03124 | opp_overlap 1738115 CCCCAGGGCTGAAGA TCGGCGAGCTGCCGC AGGA GCTGCCGCGCGCCGA CGAGCGCACGGTGTT TERM 1288 1738881 - 1738893 + G 71 -3.4 -4.68994 | ATGCCGGCGGGCCAT TCCT GGTCA AGGA TTTTTCCATGGTGCT Pmen_1576 1737890 - 1739815 + | ABC transporter related TERM 1289 1740508 - 1740480 - g 72 -5.2 -4.38712 | gap 1, opp_overlap 1740480, overlap 1740481 CCCAGCTGCAGAAAA TTCGCCCGCTGGT GATG AGC-GCGGGCGAG TCGTTCGAATAAGCC Pmen_1577 1739834 - 1740520 + | hypothetical protein TERM 1290 1740540 - 1740558 + T 78 -10.2 -3.85698 | overlap 1740541 TCCTCGGCCTAGGTA GGGTGCGC CGC GCGCACCG TTTCTACGAAGGCCC TERM 1291 1740541 - 1740557 + T 75 -13.7 -2.91276 | overlap 1740540 CCTCGGCCTAGGTAG GGTGCGC CGC GCGCACC GTTTCTACGAAGGCC Pmen_1578 1741062 - 1740613 - | UspA domain-containing protein TERM 1292 1741178 - 1741159 - R 100 -15 -4.86731 | TCCGCGCAAAGAAAA GCCCGGTG CGAG CACCGGGC GGTAACAGGGCCAGG Pmen_1579 1742035 - 1741214 - | hypothetical protein TERM 1293 1742056 - 1742067 + H 70 -4.4 -4.53419 | overlap 1742051 ACTCCGTATGGCCCG TCGA GGGC TCGA TTTGTTGTTGTGCTG TERM 1294 1742271 - 1742256 - H 71 -6.1 -4.3739 | CAGGCTTGTAGAAAA CGTCG GGAAAT CGACG AAAAGAGGCCAATTG fadB 1742502 - 1744649 + | multifunctional fatty acid oxidation complex subunit alpha fadA 1744680 - 1745855 + | 3-ketoacyl-CoA thiolase TERM 1295 1745891 - 1745873 - f 89 -13.1 -4.06491 | opp_overlap 1745873 GCAAGCGGACAGAAA CCGGGGC CCAGT GCCCCGG TTTTGCTTTTTAAGG TERM 1296 1745873 - 1745891 + F 100 -13.1 -4.77757 | opp_overlap 1745873 GCAAGCGGACAGAAA CCGGGGC CCAGT GCCCCGG TTTTGCTTTTTAAGG TERM 1297 1745896 - 1745907 + F 83 -2.2 -5.24129 | CAGTGCCCCGGTTTT GCTT TTTA AGGC TTTTTTATCGGGAAC Pmen_1582 1745929 - 1746171 + | hypothetical protein TERM 1298 1747771 - 1747754 - g 72 -8.3 -4.12902 | CAAGGAGCTGGAAAA GCGCGGC ATCG GCCGCCC GTCCACTTATGCGGC Pmen_1583 1746276 - 1748882 + | DNA topoisomerase I TERM 1299 1749016 - 1748967 - f 80 -11.3 -3.79021 | opp_overlap 1748965 1748978, overlap 1748978 TAAAAGGCCAGGAAA GGCTGACGAGATGCGCGTCTGGC TATA GCCCGACGCGCGTATCATGACCC GATCTGCTGTGGAGG TERM 1300 1748978 - 1749005 + F 77 -14.8 -2.78596 | opp_overlap 1748978 1748967, overlap 1748965 GAAAGGCTGACGAGA TGCGCGTCTGGC TATA GCCCGACGCGCG TATCATGACCCGATC Pmen_1584 1749040 - 1749558 + | hypothetical protein Pmen_1585 1749639 - 1749875 + | hypothetical protein TERM 1301 1749924 - 1749892 - T 95 -18.5 -3.28712 | opp_overlap 1749898, overlap 1749893 1749898 GTCGCTGCGCTACAA CGCAAACGGGGCTCC AAT GGAGCCCCGTTTTCA TGTGTGAAGATGCAT TERM 1302 1749923 - 1749893 - T 88 -19.8 -2.57132 | opp_overlap 1749898, overlap 1749892 1749898 TCGCTGCGCTACAAC GCAAACGGGGCTCC AAT GGAGCCCCGTTTTC ATGTGTGAAGATGCA TERM 1303 1749918 - 1749898 - T 100 -18.3 -3.80625 | opp_overlap 1749898, overlap 1749893 1749892 GCGCTACAACGCAAA CGGGGCTCC AAT GGAGCCCCG TTTTCATGTGTGAAG TERM 1304 1749898 - 1749918 + T 100 -18.3 -4.39166 | opp_overlap 1749898 1749893 1749892 GCGCTACAACGCAAA CGGGGCTCC AAT GGAGCCCCG TTTTCATGTGTGAAG Pmen_1586 1750411 - 1749941 - | SOS cell division inhibitor SulA Pmen_1587 1751035 - 1750421 - | LexA repressor TERM 1305 1751341 - 1751327 - g 76 -6.4 -4.56597 | opp_overlap 1751327, overlap 1751340 CTGTTCGCGGAAAAA GGCTTC GCC GAAACC TCGTTGCGGCTGATC Pmen_1588 1751264 - 1751971 + | TetR family transcriptional regulator Pmen_1589 1752019 - 1752543 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1306 1752982 - 1753003 + G 75 -12.9 -3.35371 | overlap 1752983 GGGTGATCCGCAGCG CGCCGCCGC GCTG GCGGCGGCC TTCATTCGGGGTATG TERM 1307 1752983 - 1753002 + G 77 -16.4 -2.60901 | overlap 1752982 GGTGATCCGCAGCGC GCCGCCGC GCTG GCGGCGGC CTTCATTCGGGGTAT Pmen_1590 1752554 - 1753564 + | beta-hexosaminidase Pmen_1591 1753575 - 1754312 + | 5'-methylthioadenosine phosphorylase TERM 1308 1754328 - 1754354 + T 77 -15.2 -2.73124 | opp_overlap 1754328 1754333, overlap 1754333 GCATTCGACAGTAAC GAAAAGGGCCGC TTA GCGGCCCTTTTG CTTTAGCGACTCAGA TERM 1309 1754354 - 1754328 - T 76 -15.2 -2.55999 | opp_overlap 1754328 1754333, overlap 1754333 GCATTCGACAGTAAC GAAAAGGGCCGC TTA GCGGCCCTTTTG CTTTAGCGACTCAGA TERM 1310 1754333 - 1754349 + T 100 -15.1 -4.54727 | opp_overlap 1754333 1754328, overlap 1754328 CGACAGTAACGAAAA GGGCCGC TTA GCGGCCC TTTTGCTTTAGCGAC TERM 1311 1754349 - 1754333 - T 100 -15.1 -4.4773 | opp_overlap 1754328 1754333, overlap 1754328 CGACAGTAACGAAAA GGGCCGC TTA GCGGCCC TTTTGCTTTAGCGAC Pmen_1592 1754886 - 1754365 - | hypothetical protein Pmen_1593 1758335 - 1754898 - | transcription-repair coupling factor TERM 1312 1755539 - 1755513 - G 84 -14.4 -3.96148 | GGTGGCGAGGATAAA GCCGGCGCCCAA GTC TTGTGCACCGGC GATGGCCTCCAGGCG TERM 1313 1757880 - 1757825 - G 70 -13.3 -3.04144 | TGCCCATGGGGAACA GGTCGATCAGCGCGC-CGCGCACGGCG AACT CGCCGTGCTCGTACACGGTG-TCGACG CAGCGGTAGCCGGCG Pmen_1594 1758467 - 1759933 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1314 1759947 - 1759976 + F 72 -13.7 -2.57211 | opp_overlap 1759953, overlap 1759953 AAGTAGCGCAAACGA AAAAAACGGGAGC TTCG GCTCCCGTTTTTC GTTGTGCCGGAAAGT TERM 1315 1759953 - 1759970 + F 100 -12.7 -4.93365 | opp_overlap 1759953, overlap 1759947 CGCAAACGAAAAAAA CGGGAGC TTCG GCTCCCG TTTTTCGTTGTGCCG TERM 1316 1759970 - 1759953 - f 100 -12.7 -5.72207 | opp_overlap 1759953 1759947 CGCAAACGAAAAAAA CGGGAGC TTCG GCTCCCG TTTTTCGTTGTGCCG Pmen_1595 1760253 - 1761590 + | Na(+)-translocating NADH-quinone reductase subunit A Pmen_1596 1761594 - 1762805 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 1317 1762843 - 1762813 - g 78 -6.1 -4.66163 | gap 1, overlap 1762816 1762817 ATGTCTAGTCAAAAA GAATCCACCGTCCG TACG CTGACGGTGG-CCC TGCTGGTGTGTCTGG TERM 1318 1762841 - 1762816 - g 81 -8.9 -4.44608 | overlap 1762813 1762817 TCTAGTCAAAAAGAA TCCACCGTCCG TACG CTGACGGTGGC CCTGCTGGTGTGTCT TERM 1319 1762840 - 1762817 - g 71 -12.4 -3.26042 | overlap 1762816 1762813 CTAGTCAAAAAGAAT CCACCGTCCG TACG CTGACGGTGG CCCTGCTGGTGTGTC Pmen_1597 1762798 - 1763586 + | Na(+)-translocating NADH-quinone reductase subunit C Pmen_1598 1763589 - 1764257 + | Na(+)-translocating NADH-quinone reductase subunit D Pmen_1599 1764257 - 1764865 + | Na(+)-translocating NADH-quinone reductase subunit E Pmen_1600 1764881 - 1766104 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1320 1766125 - 1766170 + G 89 -18.3 -3.23274 | overlap 1766119 1766128 GAGGTCTGCTGTACT CCAGCCCGTTATCGCTGTCGC CCTG GCGGCAGCCCTAACGGGCTGC TTGCATTCTGAACGG TERM 1321 1766128 - 1766167 + G 87 -18.6 -2.80511 | overlap 1766125 1766119 GTCTGCTGTACTCCA GCCCGTTATCGCTGTCGC CCTG GCGGCAGCCCTAACGGGC TGCTTGCATTCTGAA Pmen_1601 1766108 - 1767133 + | ApbE family lipoprotein Pmen_1602 1767130 - 1767360 + | hypothetical protein Pmen_1603 1767457 - 1768851 + | soluble pyridine nucleotide transhydrogenase TERM 1322 1768990 - 1768960 - T 100 -19.9 -3.73224 | opp_overlap 1768960 1768968, overlap 1768968 TCAGGCGGCAGCAAA CGACAAAACCGGC CTAGT GCCGGTTTTGTCG TTCTCGGGCGCTGTA TERM 1323 1768960 - 1768990 + T 100 -19.9 -3.29829 | opp_overlap 1768960 1768968, overlap 1768968 TCAGGCGGCAGCAAA CGACAAAACCGGC CTAGT GCCGGTTTTGTCG TTCTCGGGCGCTGTA TERM 1324 1768968 - 1768982 + T 81 -8.5 -4.58466 | opp_overlap 1768968 1768960, overlap 1768960 CAGCAAACGACAAAA CCGGC CTAGT GCCGG TTTTGTCGTTCTCGG TERM 1325 1768982 - 1768968 - T 81 -8.5 -4.63172 | opp_overlap 1768960 1768968, overlap 1768960 CAGCAAACGACAAAA CCGGC CTAGT GCCGG TTTTGTCGTTCTCGG Pmen_1604 1769833 - 1769114 - | glycerophosphoryl diester phosphodiesterase Pmen_1605 1770138 - 1769830 - | hypothetical protein Pmen_1606 1770724 - 1770158 - | type IV pilus assembly PilZ TERM 1326 1770975 - 1770993 + H 90 -4.4 -5.33405 | GTAAGGCTGCTGATC CGGCCCTG CCA CAAGGACG TTTTTCTTTCCTCCG Pmen_1607 1771021 - 1772268 + | LolC/E family lipoprotein releasing system, transmembrane protein Pmen_1608 1772261 - 1772974 + | lipoprotein releasing system, ATP-binding protein Pmen_1609 1772974 - 1774218 + | LolC/E family lipoprotein releasing system, transmembrane protein TERM 1327 1774246 - 1774229 - T 100 -12.7 -5.38249 | opp_overlap 1774229 AGTAAGCATAAAAAA GCCGTCG ATTT CGACGGC TTTTTTTCAGTGACG TERM 1328 1774229 - 1774246 + T 100 -12.7 -5.47218 | opp_overlap 1774229 AGTAAGCATAAAAAA GCCGTCG ATTT CGACGGC TTTTTTTCAGTGACG Pmen_1610 1774780 - 1774253 - | hypothetical protein TERM 1329 1775778 - 1775804 + G 74 -10 -3.84648 | overlap 1775761 GCCTGCGTGATGGTC GCGCTGGTGCTG CTC TGGCGCCTGCGC TTTCGTCATCTTGGC Pmen_1611 1774908 - 1777133 + | DNA internalization-related competence protein ComEC/Rec2 TERM 1330 1777153 - 1777182 + F 76 -7.1 -4.56775 | gap 1, overlap 1777153 1777154 GGCGGCGGTCGGCGA G-GGCGGCACCCTA TGC TAGAGTGGCGCCAC TTTTTCGAGGGGGAT Pmen_1612 1777206 - 1777838 + | MotA/TolQ/ExbB proton channel Pmen_1613 1777835 - 1778263 + | biopolymer transport protein ExbD/TolR TERM 1331 1778982 - 1779015 + G 70 -6 -4.20783 | overlap 1778983 CGCCCGGCCAGGCCG TGCATGC-GGTGGCCG GCAT CGGCAACCCGCA-GCG TTTCTTCAATACCCT lpxK 1778264 - 1779265 + | tetraacyldisaccharide 4'-kinase Pmen_1615 1779288 - 1779473 + | hypothetical protein Pmen_1616 1779474 - 1780238 + | 3-deoxy-manno-octulosonate cytidylyltransferase Pmen_1617 1780238 - 1780702 + | protein tyrosine phosphatase TERM 1332 1781067 - 1781091 + G 82 -17.2 -2.85668 | CGGCACCGTCGGCGC GGCGCCGATG CAGAA CATCGGCGCC TATGGTGTGGAGATC murB 1780699 - 1781718 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1333 1781811 - 1781792 - T 100 -13.6 -4.81551 | opp_overlap 1781792 GATGGACATGAAAAA GGGGATGC CTAG GCATCCCC TTTTTCGTTAGCGCC TERM 1334 1781792 - 1781811 + T 100 -13.6 -4.8622 | opp_overlap 1781792 GATGGACATGAAAAA GGGGATGC CTAG GCATCCCC TTTTTCGTTAGCGCC Pmen_1619 1784872 - 1781834 - | RNAse E Pmen_1620 1785405 - 1786403 + | ribosomal large subunit pseudouridine synthase C TERM 1335 1787024 - 1787060 + G 77 -13.6 -3.49475 | opp_overlap 1787025, overlap 1787025 TCAACGATTTCAATG AGCTGCGCGCCTGGCT GGATG GGCGGGGCGCGCAGCG TTCTGTAGAGGTGAG TERM 1336 1787025 - 1787059 + G 80 -17.1 -2.69471 | opp_overlap 1787025, overlap 1787024 CAACGATTTCAATGA GCTGCGCGCCTGGCT GGATG GGCGGGGCGCGCAGC GTTCTGTAGAGGTGA Pmen_1621 1786396 - 1787091 + | HAD family hydrolase TERM 1337 1787183 - 1787221 + G 71 -3.1 -4.68132 | gap 1 GTGCAGGAGCAGCGT CGTTCGCGGCGTTGGGGG ATTT TCTTCAA-GCTGCTGACG TTTCTTTATCTGTTC Pmen_1622 1787081 - 1788061 + | signal peptide peptidase SppA, 36K type TERM 1338 1788069 - 1788097 + T 100 -15.3 -4.67353 | opp_overlap 1788071 1788072, overlap 1788072 TGCGCTGACAGTTAA AAGGAAGGCCCGC TTA GCGGGCCTTCTTC TTTTTGGGTGACTCA TERM 1339 1788095 - 1788071 - T 100 -15.7 -4.2349 | opp_overlap 1788069 1788072, overlap 1788072 CGCTGACAGTTAAAA GGAAGGCCCGC TTA GCGGGCCTTCT TCTTTTTGGGTGACT TERM 1340 1788072 - 1788094 + T 100 -19.2 -4.44608 | opp_overlap 1788071 1788072, overlap 1788069 GCTGACAGTTAAAAG GAAGGCCCGC TTA GCGGGCCTTC TTCTTTTTGGGTGAC TERM 1341 1788094 - 1788072 - T 91 -19.2 -3.13773 | opp_overlap 1788072 1788069, overlap 1788071 GCTGACAGTTAAAAG GAAGGCCCGC TTA GCGGGCCTTC TTCTTTTTGGGTGAC Pmen_1623 1788691 - 1788110 - | Maf-like protein TERM 1342 1788526 - 1788536 + g 70 -2.4 -4.63218 | overlap 1788518 GATGGCTGCTGGCGA GGGC GCG GGCC TTTTCTTCGGCCAGG TERM 1343 1788989 - 1788974 - g 72 -4.6 -4.4891 | GTGACGAGCAGAAAA CTGTGG TGAT CCGCAG TGAGCTCGAGGTTGA Pmen_1624 1788802 - 1789329 + | hypothetical protein rpmF 1789343 - 1789525 + | 50S ribosomal protein L32 Pmen_1626 1789559 - 1790539 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1344 1790615 - 1790640 + F 78 -6.7 -4.62069 | overlap 1790619 TCCAACTGTCAGTTT GCTGCGCCAGG CTCG CCTGGCGTTGG TTTTTCGACTCAAGG TERM 1345 1790619 - 1790636 + F 85 -12.7 -3.81926 | overlap 1790615 ACTGTCAGTTTGCTG CGCCAGG CTCG CCTGGCG TTGGTTTTTCGACTC Pmen_1627 1790665 - 1791603 + | [Acyl-carrier-protein] S-malonyltransferase fabG 1791627 - 1792370 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1346 1792403 - 1792375 - f 100 -19.7 -5.11613 | ACATGAGCTAAAAAA GGAAGCCTCCAGA TGG TCCGGAGGCTTCC GAATGTGACGCGAGC Pmen_1629 1792601 - 1792837 + | acyl carrier protein TERM 1347 1792861 - 1792897 + F 100 -16.7 -3.64703 | opp_overlap 1792839 1792866, overlap 1792866 CAGCTTTCTGACCGA GAAAAGCCGCACTCC CTAATCA GGCGTGCGGCTTTTC TTTACGTGCAAGGCG TERM 1348 1792866 - 1792892 + F 100 -10.8 -4.90778 | opp_overlap 1792866, overlap 1792861 TTCTGACCGAGAAAA GCCGCACTCC CTAATCA GGCGTGCGGC TTTTCTTTACGTGCA TERM 1349 1792892 - 1792866 - f 93 -11.5 -4.42386 | opp_overlap 1792866 1792861 TTCTGACCGAGAAAA GCCGCACTCCC TAATC AGGCGTGCGGC TTTTCTTTACGTGCA Pmen_1630 1792948 - 1794192 + | 3-oxoacyl-(acyl carrier protein) synthase II Pmen_1631 1794192 - 1795007 + | 4-amino-4-deoxychorismate lyase Pmen_1632 1795011 - 1796066 + | aminodeoxychorismate lyase TERM 1350 1796498 - 1796536 + G 72 -11.7 -3.53012 | gap 2 TCTGCCGGTGGAAGT CGGTCTGGCTCGCGCCGCG GCG CGCGG-GCGC-CTGGACCG TTTCGAGCAGGAAGG Pmen_1633 1796076 - 1796708 + | thymidylate kinase Pmen_1634 1796701 - 1797693 + | DNA polymerase III subunit delta' Pmen_1635 1797819 - 1798175 + | type IV pilus assembly PilZ TERM 1351 1798178 - 1798212 + F 70 -12.9 -2.92463 | gap 1, opp_overlap 1798176, overlap 1798180 GCACACCATGTAATC CGCTGGCCGCGAGCGA ACTC TC-CTCGCGGCCAATG TATCTCCGTCGTCCA Pmen_1636 1798210 - 1799073 + | TatD family hydrolase TERM 1352 1799249 - 1799224 - T 100 -10.5 -5.86061 | GCTGAGCAAAAAAAA CCCGGATTC TGGGGGAT GAATCCGGG TTAAGACCATTAGGA Pmen_1637 1800559 - 1799426 - | aminotransferase, class V Pmen_1638 1800635 - 1801255 + | TetR family transcriptional regulator Pmen_1639 1801389 - 1802357 + | molybdenum cofactor synthesis domain-containing protein Pmen_1640 1802588 - 1803481 + | radical SAM domain-containing protein TERM 1353 1803641 - 1803655 + G 75 -7 -4.36914 | overlap 1803626 CGGCGCCGAGTACCA CCTGCG CGA CGCCGG TTTTCTCGACCACGG TERM 1354 1804057 - 1804067 + G 70 -8.2 -3.9398 | overlap 1804052 CCGCTCGCATCCGCA GCCG TGG CGGC TTTCTCACCTTCTAC Pmen_1641 1803555 - 1804157 + | hypothetical protein TERM 1355 1804221 - 1804266 + F 77 -14.7 -2.79501 | opp_overlap 1804180, overlap 1804180 GCTCGGTCAGGAGGT GCTTTGGCGGCGATTGGGATC TGCC GCCTCCAGTCGCGGCCAAAGC TCTGGTCAGGGTGTA TERM 1356 1804627 - 1804641 + G 72 -11.4 -3.53224 | GAGGGCGAGGGGGAA GCGCAG GTG CTGCGC TTTACCACCAACGTC Pmen_1642 1804318 - 1804887 + | hypothetical protein Pmen_1643 1804952 - 1805482 + | GCN5-related N-acetyltransferase TERM 1357 1805701 - 1805685 - g 72 -13.7 -3.03243 | opp_overlap 1805675 ATTGATGCGCCAATA CCGCCAG GCA CTGGCGG GCAAGCGCGTGATCT Pmen_1644 1805479 - 1805802 + | protein tyrosine phosphatase-like protein Pmen_1645 1807585 - 1805813 - | peptidase S8 and S53, subtilisin, kexin, sedolisin Pmen_1646 1807780 - 1809657 + | diguanylate cyclase with PAS/PAC sensor TERM 1358 1809744 - 1809707 - T 83 -17.2 -2.67803 | gap 1, opp_overlap 1809705 1809705, overlap 1809704 1809703 GGTTGACGAAATCGA TGTCGACGGCACTTCGC TGCGC GCGAAGTGC-GCCGACA GGCTTTACGCTGCCT Pmen_1647 1810309 - 1809749 - | PfpI family intracellular peptidase Pmen_1648 1811050 - 1810505 - | hypothetical protein TERM 1359 1811983 - 1811965 - g 78 -10.2 -4.15222 | opp_overlap 1811964 ATGCTTTGGAAGAAA CGCCAGGC GAT GCCTTGCG CAACCCGCTAGAGCC Pmen_1649 1811650 - 1811994 + | hypothetical protein Pmen_1650 1813039 - 1812089 - | AraC family transcriptional regulator Pmen_1651 1813264 - 1814028 + | short-chain dehydrogenase/reductase SDR Pmen_1652 1814226 - 1815497 + | hypothetical protein Pmen_1653 1816631 - 1815543 - | hypothetical protein TERM 1360 1816743 - 1816725 - H 80 -11.6 -3.75665 | overlap 1816726 GGATACTGGATGAAA CGCCGCGC TCG GCGCGGCC GTCCTCAAACTGCAA TERM 1361 1816742 - 1816726 - H 79 -15.1 -2.85078 | overlap 1816725 GATACTGGATGAAAC GCCGCGC TCG GCGCGGC CGTCCTCAAACTGCA Pmen_1654 1816772 - 1817482 + | methyltransferase type 11 Pmen_1655 1817884 - 1817492 - | glutathione-dependent formaldehyde-activating, GFA Pmen_1656 1818056 - 1818448 + | hypothetical protein TERM 1362 1819010 - 1818987 - g 71 -12.4 -3.25073 | overlap 1818985 TGGGCAAGACCAATA TGCCGCCGAT GGCC AACGGCGGCA TGCAGCGCGGCGTCT Pmen_1657 1818602 - 1820305 + | amidase Pmen_1658 1821786 - 1820353 - | peptidase M48, Ste24p TERM 1363 1821717 - 1821695 - G 72 -13.4 -3.1994 | GAGACGATCGATGAA CTGGCGTCGC CCA GCGACGGCAG GTCACTGGCACCCGT Pmen_1659 1821894 - 1822133 + | SirA family protein Pmen_1660 1822245 - 1823315 + | hypothetical protein TERM 1364 1823352 - 1823323 - T 75 -13.7 -2.93435 | opp_overlap 1823330, overlap 1823330 TGAATTAGGTACACA CAAAAAAGGCCGC AATT GCGGCCTTTTTTT CTGGCGGTGCGGGGG TERM 1365 1823330 - 1823345 + T 100 -11.8 -5.61596 | opp_overlap 1823330 1823323 GGTACACACAAAAAA GGCCGC AATT GCGGCC TTTTTTTCTGGCGGT TERM 1366 1823345 - 1823330 - T 100 -11.8 -5.4251 | opp_overlap 1823330, overlap 1823323 GGTACACACAAAAAA GGCCGC AATT GCGGCC TTTTTTTCTGGCGGT Pmen_1661 1823841 - 1823368 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pmen_1662 1824421 - 1823864 - | glycine cleavage system regulatory protein-like protein Pmen_1663 1824627 - 1825505 + | dihydrodipicolinate synthase Pmen_1664 1825522 - 1826643 + | hypothetical protein TERM 1367 1826674 - 1826701 + F 100 -9.9 -4.86731 | opp_overlap 1826674, overlap 1826676 CCAGCCGTTAATCGA TGGGCGAAACC CGCAAA GGTTTCGCCTG TTTTGTTTGCCAGAA TERM 1368 1826676 - 1826699 + F 89 -12.5 -4.05678 | opp_overlap 1826674, overlap 1826674 AGCCGTTAATCGATG GGCGAAACC CGCAAA GGTTTCGCC TGTTTTGTTTGCCAG TERM 1369 1827541 - 1827517 - g 76 -8.4 -4.20367 | GGCTGGAACAAACAA CCCCCGGCCC CGGCC GTGCCGGCGG ACGTCGCGCAGAAAA TERM 1370 1827575 - 1827557 - g 72 -5.2 -4.37092 | overlap 1827558 1827570 ACGTCGCGCAGAAAA CCGCGG ACAAATA CCGCGA AGCGCTGACCCGGCT Pmen_1665 1826731 - 1827600 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1371 1827615 - 1827633 + F 89 -13.1 -4.07687 | opp_overlap 1827614 ATCCCAGCGAGAGAG GGCCGGG TGTAC CCCGGCC TTTTCACAAGCGCCT TERM 1372 1827815 - 1827855 + F 100 -19.1 -4.0056 | opp_overlap 1827816 1827822, overlap 1827818 1827822 TTCCCGCCATATCCA AGCCAAAGCCCCGAATCGT ATT ACGGTTCGGGGCTTTGTCG TTTCTGGGTGTTTAT TERM 1373 1827854 - 1827816 - f 95 -20.4 -3.12351 | opp_overlap 1827815 1827818 1827822, overlap 1827822 TCCCGCCATATCCAA GCCAAAGCCCCGAATCGT ATT ACGGTTCGGGGCTTTGTC GTTTCTGGGTGTTTA TERM 1374 1827818 - 1827852 + F 100 -23.8 -3.0386 | opp_overlap 1827816 1827822, overlap 1827815 1827822 CCGCCATATCCAAGC CAAAGCCCCGAATCGT ATT ACGGTTCGGGGCTTTG TCGTTTCTGGGTGTT TERM 1375 1827848 - 1827822 - f 100 -16.6 -3.77666 | opp_overlap 1827822 1827818 1827815, overlap 1827816 CATATCCAAGCCAAA GCCCCGAATCGT ATT ACGGTTCGGGGC TTTGTCGTTTCTGGG TERM 1376 1827822 - 1827848 + F 100 -18.8 -4.17701 | opp_overlap 1827816 1827822, overlap 1827818 1827815 CATATCCAAGCCAAA GCCCCGAATCGT ATT ACGGTTCGGGGC TTTGTCGTTTCTGGG TERM 1377 1827941 - 1827926 - f 70 -3.9 -4.59773 | TCGCAGCGCTAAAAA GCGCG AGCTGA CGCAC ATTCCTGCAAAGCAG TERM 1378 1828573 - 1828555 - g 70 -10.3 -3.65522 | GATCCACTCGAAGAA CAGCGTC TCGCC GACGCTG ATGCTGGGCTATCAA Pmen_1666 1828235 - 1828915 + | hypothetical protein Pmen_1667 1830468 - 1828987 - | hypothetical protein algL 1831598 - 1830483 - | poly(beta-D-mannuronate) lyase Pmen_1669 1833007 - 1831589 - | hypothetical protein Pmen_1670 1833683 - 1833042 - | hypothetical protein Pmen_1671 1834805 - 1833699 - | hypothetical protein Pmen_1672 1836249 - 1834816 - | membrane bound O-acyl transferase, MBOAT family protein Pmen_1673 1837658 - 1836267 - | hypothetical protein Pmen_1674 1839130 - 1837655 - | hypothetical protein Pmen_1675 1840283 - 1839138 - | type IV pilus assembly PilZ Pmen_1676 1841821 - 1840301 - | hypothetical protein Pmen_1677 1843306 - 1841882 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 1379 1843375 - 1843403 + r 78 -2.5 -5.12068 | gap 2, opp_overlap 1843374 1843378, overlap 1843375 1843377 1843378 CACGCCATGACCAAT CA-A-GCGGCACT CGACC GGTGCCGCCTCTG TTTTTGTTAGCTGTC Pmen_1678 1844731 - 1843421 - | GDP-mannose 6-dehydrogenase TERM 1380 1845424 - 1845394 - R 100 -20.6 -4.18494 | opp_overlap 1845394 1845401, overlap 1845401 CATGCGGACGGAAAA CGACAAAGCCCTCC GAG AGAGGGCTTTGTCG TTTCTGAGGCGTGAG TERM 1381 1845394 - 1845424 + r 100 -19.9 -3.86897 | opp_overlap 1845394 1845401, overlap 1845401 CATGCGGACGGAAAA CGACAAAGCCCTC CGAGA GAGGGCTTTGTCG TTTCTGAGGCGTGAG TERM 1382 1845401 - 1845417 + r 79 -9.4 -4.17701 | opp_overlap 1845401 1845394, overlap 1845394 ACGGAAAACGACAAA GCCCTC CGAGA GAGGGC TTTGTCGTTTCTGAG TERM 1383 1845417 - 1845401 - R 84 -10.1 -4.21402 | opp_overlap 1845394 1845401, overlap 1845394 ACGGAAAACGACAAA GCCCTCC GAG AGAGGGC TTTGTCGTTTCTGAG TERM 1384 1845601 - 1845562 - R 70 -3.2 -4.65916 | opp_overlap 1845568, overlap 1845563 1845564 CTGACTGGAAGAAAA GGGGGGCGCAGGCCGGGG TGTG CCCCGGCCTGCGTTGAGT TGCTGGAGGAGCCCC TERM 1385 1845568 - 1845595 + r 100 -24.2 -3.20723 | opp_overlap 1845564 1845563 1845562 GGAAGAAAAGGGGGG CGCAGGCCGGGG TGTG CCCCGGCCTGCG TTGAGTTGCTGGAGG Pmen_1679 1848782 - 1845636 - | acriflavin resistance protein Pmen_1680 1849866 - 1848784 - | RND family efflux transporter MFP subunit Pmen_1681 1850522 - 1849872 - | TetR family transcriptional regulator TERM 1386 1850765 - 1850745 - R 72 -12.5 -3.05384 | opp_overlap 1850746 GCCGGCGGTAGTGAA TGGGTGCGC AAG GCGCACCCT GTGTGCGGCCGTCAG TERM 1387 1850746 - 1850764 + r 81 -16 -2.87564 | opp_overlap 1850745 CCGGCGGTAGTGAAT GGGTGCGC AAG GCGCACCC TGTGTGCGGCCGTCA Pmen_1682 1851694 - 1850777 - | LysR family transcriptional regulator Pmen_1683 1851864 - 1854167 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Pmen_1684 1854364 - 1855353 + | alpha/beta hydrolase fold Pmen_1685 1855626 - 1855366 - | hypothetical protein Pmen_1686 1855905 - 1856891 + | hypothetical protein Pmen_1687 1856879 - 1857220 + | hypothetical protein Pmen_1688 1857827 - 1857210 - | NAD(P)H dehydrogenase (quinone) Pmen_1689 1859214 - 1857820 - | fumarate hydratase Pmen_1690 1860312 - 1859302 - | hypothetical protein Pmen_1691 1860588 - 1861085 + | hypothetical protein Pmen_1692 1861097 - 1861390 + | transcriptional regulator BolA TERM 1388 1861517 - 1861536 + F 100 -16.4 -4.13183 | GCTACAATCGCTCCC GCGCCGGC CCAC GCCGGCGC TTTCGTTTAGATTTT TERM 1389 1861634 - 1861585 - f 70 -5 -4.56914 | opp_overlap 1861586, overlap 1861586 CCATGCAAAGCAAAA GCAGGCGAGGAA-GCGCAGTGTAC TTTT GTAC-CTGAGCATTCCGAGCCTGT TTTTAACGCAGCAGG TERM 1390 1861586 - 1861633 + F 79 -8.5 -4.56597 | opp_overlap 1861585 1861586 CATGCAAAGCAAAAG CAGGCGAGGAA-GCGCAGTGTAC TTTT GTAC-CTGAGCATTCCGAGCCTG TTTTTAACGCAGCAG Pmen_1693 1861714 - 1862652 + | hypothetical protein Pmen_1694 1862655 - 1863287 + | DSBA oxidoreductase Pmen_1695 1863280 - 1865061 + | ABC transporter related Pmen_1696 1865418 - 1866500 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1391 1867517 - 1867502 - g 70 -8.2 -3.90316 | AGGCGCTGAAAAAGA GCCAGG AGGA CCCGGC GACCTTCATCGACGA Pmen_1697 1866505 - 1867644 + | homogentisate 1,2-dioxygenase TERM 1392 1867772 - 1867788 + F 86 -12.3 -3.92522 | AGGGCGCTACAGCGG GCGAAGC AGT GCTTCGC TTTCTCCGCTTCCGC Pmen_1698 1867860 - 1868840 + | fumarylacetoacetate (FAA) hydrolase Pmen_1699 1868907 - 1869557 + | maleylacetoacetate isomerase TERM 1393 1869716 - 1869694 - g 78 -6.2 -4.58663 | overlap 1869696 ATGACCCGTGAAAAA CCCAAGAACC TCT GGCTCTCGCG CTGGGGCTTCATCCT Pmen_1700 1869679 - 1871139 + | sodium:neurotransmitter symporter TERM 1394 1871157 - 1871182 + F 100 -18.3 -5.24129 | CTGGCGGCAGATCGA GGCGCAGCTCC GCGA GGGGCTGCGCC TTTTTTGTGGGCGGC Pmen_1701 1871430 - 1873382 + | methyl-accepting chemotaxis sensory transducer TERM 1395 1873466 - 1873499 + T 84 -16.7 -2.72463 | gap 1 GTCCCCTGTGTACCT GGTGC-GCGCGGCGCA CCC TGCGCAGCGCTGCGCC TGGTTACCGCTGGCT Pmen_1702 1873913 - 1873503 - | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_1703 1873976 - 1874278 + | antibiotic biosynthesis monooxygenase Pmen_1704 1875063 - 1874290 - | short-chain dehydrogenase/reductase SDR Pmen_1705 1875949 - 1875245 - | hypothetical protein TERM 1396 1875724 - 1875743 + g 73 -10.6 -3.66556 | overlap 1875742 CGCCCAGACGCGGCG GCCGCACC TTCA GGCGCGGC TTGTCTTCCAGCGTT TERM 1397 1875799 - 1875773 - G 72 -5.2 -4.32857 | gap 1, overlap 1875775 1875776 1875778 TTGGTGAAAGAGAAA CAGCA-GCCAG ACATGG CTGACCTGCTG CAGACCCTGAACTGC Pmen_1706 1876165 - 1875959 - | hypothetical protein Pmen_1707 1876919 - 1876209 - | RNA-binding S4 domain-containing protein Pmen_1708 1877404 - 1876979 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1398 1878137 - 1878181 + G 72 -13.6 -3.14132 | TGCGCGACCACCAGT GCGCCAGCCAGTGGC-AACCTG CCG CCGATTCGCCGCTGGC-GGCGC TTGATCCCGACAAGC Pmen_1709 1877578 - 1878729 + | UDP-N-acetylglucosamine 2-epimerase nfrB 1878726 - 1880900 + | bacteriophage N4 adsorption protein B TERM 1399 1880963 - 1880973 + G 72 -8.2 -4.12942 | overlap 1880956 GTCGCGGCTGCCGAG CCGC TCA GCGG TTTTCAGCAGTTTCG TERM 1400 1883189 - 1883205 + G 74 -12.3 -3.57144 | opp_overlap 1883188 1883187 AGGGCCCATGAAACG CTGTCGC GGC GCGACAG TTTCACCCTGGCCAG Pmen_1711 1880897 - 1884046 + | bacteriophage N4 receptor, outer membrane subunit Pmen_1712 1884046 - 1884882 + | hypothetical protein TERM 1401 1884888 - 1884923 + T 72 -13.2 -2.67441 | opp_overlap 1884891, overlap 1884884 1884898 GTTGCGCTAGTGCAA AAAGCACGAACCCCGC CGGA GCGGGGTTCGTGCACG TGCTGTAGTGGCTTA TERM 1402 1884920 - 1884891 - T 100 -23.7 -4.62069 | opp_overlap 1884888 1884884 1884898 GCGCTAGTGCAAAAA GCACGAACCCCGC CGGA GCGGGGTTCGTGC ACGTGCTGTAGTGGC Pmen_1713 1886258 - 1884936 - | MiaB-like tRNA modifying enzyme YliG Pmen_1714 1886903 - 1886355 - | cytochrome B561 TERM 1403 1887033 - 1887002 - H 79 -16 -2.78015 | opp_overlap 1887008 1887026, overlap 1887008 TCAATGAGCGGAAAC GAAAAAGGCCACTC GCTT GAGTGGCCTTTATC TGAAGGTGGTTGCGG TERM 1404 1887008 - 1887027 + H 95 -13.6 -4.04206 | opp_overlap 1887008 1887002, overlap 1887026 AGCGGAAACGAAAAA GGCCACTC GCTT GAGTGGCC TTTATCTGAAGGTGG TERM 1405 1887027 - 1887008 - H 100 -13.6 -4.99134 | opp_overlap 1887008 1887026, overlap 1887002 AGCGGAAACGAAAAA GGCCACTC GCTT GAGTGGCC TTTATCTGAAGGTGG TERM 1406 1887200 - 1887219 + H 100 -13.6 -4.26076 | opp_overlap 1887200 TCGCCCAAGCAAAAA GGCCACTC GATT GAGTGGCC TTTTCGTGAAGCTGG TERM 1407 1887219 - 1887200 - H 100 -13.6 -4.8622 | opp_overlap 1887200 TCGCCCAAGCAAAAA GGCCACTC GATT GAGTGGCC TTTTCGTGAAGCTGG TERM 1408 1887457 - 1887481 + H 86 -14.3 -3.41393 | AGCCCGCCATCCGGA CGGCCATTGCA AGC TGCTATGGCCG TTATCCCTCTCTGAT Pmen_1715 1887581 - 1889545 + | beta-lactamase domain-containing protein TERM 1409 1889554 - 1889591 + T 100 -27.1 -4.18367 | GCCCTGAGGCCTGCG CGAACGCCCCGCTCGGT GCAG GCCGGGCGGGGCGTTCG TTTGTCTGTGTGCTA Pmen_1716 1891033 - 1889645 - | hypothetical protein Pmen_1717 1891459 - 1891148 - | hypothetical protein Pmen_1718 1891844 - 1891452 - | hypothetical protein Pmen_1719 1893232 - 1891865 - | hypothetical protein Pmen_1720 1895026 - 1893245 - | hypothetical protein TERM 1410 1895318 - 1895333 + G 79 -6.8 -4.62069 | overlap 1895319 GCTACCTCATCGCCA TTGCCG AGGC CGGCAG TTTTTCCGCTGCCGC Pmen_1721 1895284 - 1896252 + | LysR family transcriptional regulator Pmen_1722 1897517 - 1896216 - | major facilitator transporter TERM 1411 1896674 - 1896629 - G 77 -12.5 -3.75535 | gap 1, overlap 1896621 1896619 1896633 TCAGACACAGCGAAA CGAATGCGCCGCGCGCCACGCG CGA CGAGTAGC-CGCTGCGCATCAG ACGCTGCGACAGCCA TERM 1412 1896670 - 1896633 - G 78 -14.1 -3.56268 | gap 1, overlap 1896621 1896619 1896629 ACACAGCGAAACGAA TGCGCCGCGCGCCACGCG CGA CGAGTAGC-CGCTGCGCA TCAGACGCTGCGACA TERM 1413 1897577 - 1897552 - R 100 -19 -5.14563 | opp_overlap 1897552 GTTCTTATGAAAAAA GGCCCGCCCC GCGTGG GGGGCGGGCC TGTCCTGCGCCCTAG TERM 1414 1897552 - 1897577 + r 88 -19 -2.78816 | opp_overlap 1897552 GTTCTTATGAAAAAA GGCCCGCCCC GCGTGG GGGGCGGGCC TGTCCTGCGCCCTAG Pmen_1723 1898752 - 1897589 - | acyl-CoA dehydrogenase domain-containing protein TERM 1415 1898237 - 1898183 - G 86 -8.3 -4.72986 | gap 1 CAGGTCGATGAAAAA CGCCGAGATGCCTTGCGGGCCGCGGC CCGG ACCGGTGACCGCGA-GCAGCACGGCG AGGTCGGCATAGGGC TERM 1416 1898711 - 1898731 + g 79 -4.7 -4.75776 | gap 1 GACGAAGGCGTTGAT GCC-CTCG ATCAGG CGAGCGGC TTTTTCACTTGGCTT Pmen_1724 1900310 - 1898763 - | AMP-dependent synthetase and ligase Pmen_1725 1901762 - 1900578 - | acetyl-CoA acetyltransferase TERM 1417 1901851 - 1901821 - H 76 -12.6 -3.28712 | gap 1 GGCTCGCGGCGATAA CGG-AAGCGCCGC TGTGGC GCGGCGCTCGCCG ACCACCCTAGGTAAC TERM 1418 1902471 - 1902481 + G 79 -8.2 -4.30576 | CAGCGACTGGCGCAA GCCC AAC GGGC TTTTCGTGATCACCC Pmen_1726 1901995 - 1903053 + | DNA polymerase IV Pmen_1727 1903546 - 1903148 - | protein of unknown function DUF306, Meta and HslJ Pmen_1728 1903982 - 1903551 - | hypothetical protein Pmen_1729 1905005 - 1904010 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pmen_1730 1907765 - 1905015 - | multi-sensor hybrid histidine kinase TERM 1419 1906536 - 1906560 + g 73 -12.9 -3.34398 | overlap 1906535 GGTGAACTTGATGGC GTTGCTGACCA GGT TGGTCAGCACC TGTTTCAGGCGCAGC Pmen_1731 1907883 - 1908593 + | two component transcriptional regulator Pmen_1732 1908590 - 1909927 + | integral membrane sensor signal transduction histidine kinase cysM 1910027 - 1910932 + | cysteine synthase B rumA 1910932 - 1912284 + | 23S rRNA 5-methyluridine methyltransferase TERM 1420 1912969 - 1912955 - g 72 -7.1 -4.23674 | overlap 1912940 GCCGACGAAGAGAAA CGCCA GCGTG TGGCG CGCGAGGTGTTCGAC Pmen_1735 1912412 - 1914655 + | (p)ppGpp synthetase I, SpoT/RelA mazG 1914668 - 1915498 + | nucleoside triphosphate pyrophosphohydrolase Pmen_1737 1915675 - 1916214 + | hypothetical protein Pmen_1738 1916590 - 1916318 - | transcriptional antiterminator, Rof TERM 1421 1916660 - 1916688 + r 100 -18.9 -4.14725 | opp_overlap 1916660 CTTCGCATGAAAAAA CGCCGCAATCCCC AGA GGGCATTGCGGCG TTTCTCGTTTCAGTG TERM 1422 1916688 - 1916660 - R 100 -18.9 -5.14563 | opp_overlap 1916660 CTTCGCATGAAAAAA CGCCGCAATCCCC AGA GGGCATTGCGGCG TTTCTCGTTTCAGTG Pmen_1739 1917983 - 1916736 - | outer membrane porin TERM 1423 1918204 - 1918190 - H 78 -2.8 -5.055 | GCAAGTCTGAAAAAA CTCG TTCGAGC CGAG TGAAAGGGCAATCAG Pmen_1740 1918304 - 1919443 + | hypothetical protein Pmen_1741 1919492 - 1919728 + | glutaredoxin 2 TERM 1424 1919757 - 1919788 + T 80 -11.7 -3.72576 | opp_overlap 1919757 1919764, overlap 1919764 CTGAATCGCAGGCAA TAAAAAACCCGCC GGTTAA GGCGGGTTTTTGA TTTGGTCGGAGAGAC TERM 1425 1919781 - 1919764 - T 100 -9.8 -5.4833 | opp_overlap 1919757 1919764, overlap 1919757 GCAGGCAATAAAAAA CCCGCC GGTTAA GGCGGG TTTTTGATTTGGTCG TERM 1426 1919764 - 1919781 + T 100 -9.8 -5.01811 | opp_overlap 1919764 1919757, overlap 1919757 GCAGGCAATAAAAAA CCCGCC GGTTAA GGCGGG TTTTTGATTTGGTCG Pmen_1742 1920222 - 1920001 - | hypothetical protein mobA 1920895 - 1920290 - | molybdopterin-guanine dinucleotide biosynthesis protein A Pmen_1744 1920963 - 1921502 + | molybdenum cofactor biosynthesis protein B Pmen_1745 1921499 - 1922713 + | molybdopterin molybdochelatase Pmen_1746 1922863 - 1923474 + | NLP/P60 protein TERM 1427 1923482 - 1923505 + F 74 -12.4 -3.14132 | gap 1, opp_overlap 1923446 ATCCTTGACGCATGA CGGCGCG-CCC GCA GGGTTGCGCCG TTCGTCGCGAGACGG Pmen_1747 1923559 - 1924083 + | NLP/P60 protein Pmen_1748 1924091 - 1924750 + | caffeoyl-CoA O-methyltransferase Pmen_1749 1924757 - 1925077 + | hypothetical protein TERM 1428 1925733 - 1925756 + G 72 -8.2 -4.07687 | gap 1 GGGCGCGGCCAGCAC CGG-GGAGGAA ACC TTCTTCCGCCG TTTTCCCGAGGAAGT Pmen_1750 1925506 - 1926117 + | cob(I)yrinic acid a,c-diamide adenosyltransferase Pmen_1751 1926117 - 1927409 + | cobyrinic acid a,c-diamide synthase TERM 1429 1927990 - 1927973 - g 75 -3.3 -4.72272 | GCCTTCTATGAAAAA CCCATGC TGGT GCAAGAG GGCTGGGCCACGCCT Pmen_1752 1927406 - 1928059 + | cob(II)yrinic acid a,c-diamide reductase cobD 1928063 - 1928971 + | cobalamin biosynthesis protein Pmen_1754 1928964 - 1929974 + | threonine-phosphate decarboxylase Pmen_1755 1929974 - 1931425 + | cobyric acid synthase TERM 1430 1931780 - 1931819 + G 78 -14.2 -3.48772 | gap 1, overlap 1931781 TGCTGATGCTGGAGG ACGCGCAGCGCCTGGCTGC CGA GC-GCGAGGCGCTGCTCGC TTGTGTGGAGCAATT TERM 1431 1931781 - 1931818 + G 85 -17.7 -2.68942 | gap 1, overlap 1931780 GCTGATGCTGGAGGA CGCGCAGCGCCTGGCTGC CGA GC-GCGAGGCGCTGCTCG CTTGTGTGGAGCAAT TERM 1432 1931961 - 1931938 - g 78 -16 -3.14132 | opp_overlap 1931937 1931934 GGCTGGCTGCACCAA GCGCTGGCCG AACG CAGCCAGCGC GTGCTGTTCACCGTT cobU 1931494 - 1932015 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cobT 1932012 - 1933067 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Pmen_1758 1933067 - 1933639 + | phosphoglycerate mutase cobS 1933636 - 1934367 + | cobalamin synthase Pmen_1760 1934441 - 1934845 + | MarR family transcriptional regulator Pmen_1761 1934898 - 1936103 + | major facilitator transporter Pmen_1762 1936288 - 1936839 + | glutathione peroxidase Pmen_1763 1936962 - 1937888 + | acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein TERM 1433 1938466 - 1938478 + G 84 -9.1 -4.56597 | AGCGTCTGGATGCGC TGCGC CGC GCGCA TTTTTCCGCGGCCGC Pmen_1764 1937931 - 1938989 + | lipase chaperone Pmen_1765 1939002 - 1940762 + | integral membrane sensor hybrid histidine kinase Pmen_1766 1941378 - 1940767 - | two component LuxR family transcriptional regulator Pmen_1767 1942717 - 1941443 - | membrane protein involved in aromatic hydrocarbon degradation Pmen_1768 1943340 - 1942861 - | hypothetical protein TERM 1434 1942941 - 1942912 - G 71 -9.3 -3.86346 | CCAGGCCTCGAGAAA GTCCCCCAGCC GGCCCTGT GGCTGGAAGAC CCGGCACCAGATACG Pmen_1769 1944391 - 1943537 - | rhodanese domain-containing protein Pmen_1770 1944489 - 1945289 + | phospholipid/glycerol acyltransferase TERM 1435 1946508 - 1946527 + G 72 -7.2 -4.24342 | gap 1 GGGGCCAACATGCCC TCCA-CGCT GGA AGCGGTGGA TTTGTTCGTCGAGGC Pmen_1771 1945464 - 1946801 + | glutamate dehydrogenase TERM 1436 1946843 - 1946826 - T 100 -8.3 -5.93809 | opp_overlap 1946826 TGGCGATAAAAAAAA GCCCAGG TTAT CCGGGGC TTTTTTCTCAGTGCA TERM 1437 1946826 - 1946843 + T 100 -8.3 -5.28176 | opp_overlap 1946826 TGGCGATAAAAAAAA GCCCAGG TTAT CCGGGGC TTTTTTCTCAGTGCA Pmen_1772 1947915 - 1946851 - | gluconolactonase Pmen_1773 1948040 - 1949173 + | ribonuclease D Pmen_1774 1949170 - 1949463 + | hypothetical protein Pmen_1775 1949467 - 1950399 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1438 1950430 - 1950457 + F 81 -4.7 -5.00616 | overlap 1950400 GCGCCGCTTGGCCGG GCCCGGCGCTC GGGCTA GACTGCCGCGC TTTTTTCCACCCGAG Pmen_1776 1950487 - 1950936 + | hypothetical protein Pmen_1777 1951004 - 1952275 + | hypothetical protein Pmen_1778 1952674 - 1952324 - | hypothetical protein Pmen_1779 1952751 - 1953062 + | hypothetical protein Pmen_1780 1953561 - 1953091 - | cyclic nucleotide-binding protein Pmen_1781 1955703 - 1953667 - | oligopeptidase B Pmen_1782 1955811 - 1956281 + | hypothetical protein Pmen_1783 1956338 - 1956784 + | histidine triad (HIT) protein Pmen_1784 1956789 - 1957562 + | glutamine amidotransferase, class-II Pmen_1785 1957576 - 1958100 + | hypothetical protein TERM 1439 1958753 - 1958741 - g 80 -9.1 -4.25104 | CTGGCGCGAGGAAAA CGGCT ACG AGCCG GTGCAACTGGTCGGC Pmen_1786 1958247 - 1959293 + | hypothetical protein TERM 1440 1959394 - 1959365 - T 100 -12.1 -4.96848 | opp_overlap 1959366, overlap 1959366 TCCGGGATACAAAAA CGCCGCGAATCCT GTGC AGGGTTCGCGGCT TTTTTTTTCGTTGCG TERM 1441 1959366 - 1959393 + T 100 -17.8 -6.23209 | opp_overlap 1959365 1959366 CCGGGATACAAAAAC GCCGCGAATCCT GTGC AGGGTTCGCGGC TTTTTTTTTCGTTGC TERM 1442 1959393 - 1959366 - T 93 -15.6 -3.57627 | opp_overlap 1959366, overlap 1959365 CCGGGATACAAAAAC GCCGCGAATCCT GTGC AGGGTTCGCGGC TTTTTTTTTCGTTGC Pmen_1787 1960599 - 1959421 - | hypothetical protein TERM 1443 1960190 - 1960228 + g 70 -3.8 -4.51174 | gap 1, overlap 1960183 1960168 1960193 1960194 GAGCCGAACGGACTG GTACCGCCGGTGCCGAT CCACTT GTTGCCGCCGGCG-TGC TTTTCCTTCTGCTCC Pmen_1788 1961621 - 1960776 - | ATPase Pmen_1789 1962875 - 1961781 - | hypothetical protein TERM 1444 1963476 - 1963458 - g 70 -6.6 -4.2828 | GGCCATTCATGAAAA GACCACCG GCC CGGAGATC TGGCGTGATACCGAC Pmen_1790 1962991 - 1963962 + | cysteine synthase TERM 1445 1963986 - 1964001 + T 95 -11.8 -4.72272 | opp_overlap 1963986 ATTCAGCGCGACCAA GCCGCC TACG GGCGGC TTTTTCGTAGGGGCA Pmen_1791 1965086 - 1964196 - | hypothetical protein TERM 1446 1965182 - 1965239 + H 95 -20.2 -2.73635 | gap 2, opp_overlap 1965197 1965198 1965207, overlap 1965182 GGTTTGTGCCAACCC GTAGCCCGGATGAAATCCGGGAAGAC CGGGGATA GTC--CCCGGATTGCATCCGGGCTAC GTTTGGCCGACTTTG TERM 1447 1965182 - 1965240 + H 88 -14.2 -3.56594 | gap 3, opp_overlap 1965197 1965198 1965207, overlap 1965182 GGTTTGTGCCAACCC -GTAGCCCGGATGAAATCCGGGAAGAC CGGGGATA GTC--CCCGGATTGCATCCGGGCTACG TTTGGCCGACTTTGC TERM 1448 1965223 - 1965207 - H 76 -13.7 -3.05294 | opp_overlap 1965182 1965182, overlap 1965198 1965197 TGAAATCCGGGAAGA CCGGGGA TAG TCCCCGG ATTGCATCCGGGCTA TERM 1449 1966092 - 1966107 + G 73 -6 -4.37092 | overlap 1966081 1966077 1966075 1966074 TGGACGTGGCGATTC CCGCCG AGTT CGTCGG TTTTCTCAAGCGCAT aceK 1965296 - 1967014 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein Pmen_1793 1967983 - 1967252 - | beta-lactamase domain-containing protein TERM 1450 1967362 - 1967316 - G 71 -9.5 -3.85698 | CGCTCGCCGGAGAAA CT-CGCGAAATGCCCGCCATGCA CGG TGCGTA-CGGGCAGCTCGCGCAG GCGCGCAAGGCTGCG TERM 1451 1967778 - 1967757 - G 74 -12.3 -3.56643 | opp_overlap 1967760 GCGATATGGTCGAAA TGGCAGTGG CTGG CCACCGCCA GCAGCGGTTTCTCGG Pmen_1794 1969517 - 1968177 - | permease for cytosine/purine, uracil, thiamine, allantoin Pmen_1795 1971257 - 1969623 - | hypothetical protein Pmen_1796 1972691 - 1971297 - | nucleoside recognition domain-containing protein TERM 1452 1972791 - 1972762 - R 81 -8.5 -4.71426 | gap 1, overlap 1972763 GGCGGAGCAATAAAA GCCGGCGG-TCAGC GGC GCTGAACCCCCGGA AGCACGCAGAGCATT TERM 1453 1972790 - 1972763 - R 74 -12 -3.42374 | gap 1, overlap 1972762 GCGGAGCAATAAAAG CCGGCGG-TCAGC GGC GCTGAACCCCCGG AAGCACGCAGAGCAT Pmen_1797 1973729 - 1972770 - | putative agmatinase TERM 1454 1973612 - 1973624 + g 75 -3.3 -4.7254 | overlap 1973588 1973587 CGCCGACGAAGGCGG CGTCG AGC TGGCG TTTTTCCTCGGGGCT TERM 1455 1973845 - 1973820 - H 70 -4.1 -4.59773 | overlap 1973821 CGGCAGGGGCAAAAA CTTAGTTCAGA GATT TCTAAACTAAT CGCCCGGCACTAGAC Pmen_1798 1973972 - 1975534 + | diguanylate phosphodiesterase Pmen_1799 1975544 - 1976443 + | LysR family transcriptional regulator Pmen_1800 1976563 - 1978128 + | methyl-accepting chemotaxis sensory transducer Pmen_1801 1978315 - 1978908 + | DTW domain-containing protein TERM 1456 1978970 - 1978912 - T 100 -24 -2.72661 | gap 1, opp_overlap 1978951 1978953 CATCAGCGCTAACGA GGTGCGCACGGCGCACCCTACGCGCGT AGCCGA AGGCATGTAGGGTGCGCCGCGCGCAC- CAGCTTTGGTGAATG Pmen_1802 1980466 - 1979108 - | HlyD family type I secretion membrane fusion protein TERM 1457 1979243 - 1979253 + g 72 -4.6 -4.4715 | overlap 1979236 1979252 CGGATTCTCCTCGCT GCCG AGA TGGC TTTTATCGGTTCGCA Pmen_1803 1982629 - 1980479 - | ABC transporter related Pmen_1804 1984018 - 1982663 - | TolC family type I secretion outer membrane protein TERM 1458 1983999 - 1983986 - G 71 -3.1 -4.59511 | overlap 1983975 1983976 1983989 AACAGTCGCCAAAAA CATGG CGCT CCATA GCGGGGTTAGGGTGC TERM 1459 1984076 - 1984063 - R 72 -2.3 -4.82901 | opp_overlap 1984053 1984052 1984064, overlap 1984064 CTGTCGCCATAAAAA TGGCA TTTC TGCCT GTTGAACCGTTTCAG Pmen_1805 1984632 - 1984366 - | hypothetical protein Pmen_1806 1984657 - 1994211 + | hemolysin-type calcium-binding region TERM 1460 1994278 - 1994304 + F 100 -15.1 -4.73388 | opp_overlap 1994278 TCTCAACTAGAGTAA GCCCGCTGCCC GTTCG GGGCGGTGGGC TTTTTCATGGGCGTT Pmen_1807 1994334 - 1994675 + | hypothetical protein TERM 1461 1994680 - 1994666 - T 76 -10 -3.72742 | opp_overlap 1994676 CGACGACGAACACAA CCTGGT GTG ACCAGG CGCCAGCCCGGATGC Pmen_1808 1996683 - 1994731 - | diguanylate cyclase/phosphodiesterase TERM 1462 1995980 - 1996008 + g 83 -16 -3.61398 | opp_overlap 1995977, overlap 1995981 CTGTCCTGATAAGCC TCCTCGCGCAGC TTCTC GCTGCGCGAGGC TTCTTCGGCAAACAG TERM 1463 1995981 - 1996007 + g 93 -19.5 -2.76696 | opp_overlap 1995977, overlap 1995980 TGTCCTGATAAGCCT CCTCGCGCAGC TTCTC GCTGCGCGAGG CTTCTTCGGCAAACA TERM 1464 1996496 - 1996476 - G 72 -14.1 -3.03243 | AGCCACTGTCGAAGA TCGAGCTGA CCA TCAGCTCGA TCATCGCCGGGTCGT TERM 1465 1996791 - 1996807 + r 78 -5 -4.82901 | AGTCGAGCGCGACTC CGACCG TTTTT CGGCCG TTTTTGTGGGGCCGC Pmen_1809 1997549 - 1996869 - | periplasmic protein-like protein Pmen_1810 1998110 - 1997712 - | hypothetical protein TERM 1466 1997976 - 1997944 - G 70 -8.3 -3.9534 | overlap 1997945 AGCCAGATGTAGAAA CGCCGCGAACTGC GCACGAA GCAGGCCGCGGCC AGGAGCAGGAAAGGC Pmen_1811 1998747 - 1998160 - | yecA family protein TERM 1467 1999871 - 1999859 - g 74 -10.5 -3.80573 | opp_overlap 1999860 CCTACTACCAGGAAA CCGGC CGC GCCGG GCGTGACGGTTTGCC Pmen_1812 1998913 - 2001045 + | ATP-dependent DNA helicase RecQ Pmen_1813 2001127 - 2002287 + | diguanylate cyclase TERM 1468 2002393 - 2002403 + F 74 -4 -4.72486 | GTTATGGCTAGCTAC CTAA TAA TTAG TTTTTGACCTTTGTA Pmen_1814 2002434 - 2002865 + | MarR family transcriptional regulator TERM 1469 2004074 - 2004034 - g 71 -12.5 -3.29144 | overlap 2004022 2004035 CCAGGCCGCCGAGAA CCTGCAGCTGCAGCAGGGC CTG GCGCAACTGCAACTGCAGC TGCAGCAACTGCAGG TERM 1470 2004073 - 2004035 - g 74 -16 -2.57344 | overlap 2004022 2004034 CAGGCCGCCGAGAAC CTGCAGCTGCAGCAGGGC CTG GCGCAACTGCAACTGCAG CTGCAGCAACTGCAG Pmen_1815 2003171 - 2005249 + | peptidoglycan-binding LysM TERM 1471 2005269 - 2005299 + T 100 -24 -3.53444 | GGTCACCGAGCCCTT CACCCAGGCCGCGC CAT GCGCGGCCTGGGCG TTTCAGGCGGGCTGA Pmen_1816 2007519 - 2005333 - | patatin TERM 1472 2007566 - 2007548 - H 71 -8.8 -3.78953 | overlap 2007561 AGGGGCAGGACGAAA GGCGGCTA TTA TAGGCGCC ACGCCCCAGTCCAGA Pmen_1817 2007591 - 2007872 + | putative selenoprotein Pmen_1818 2008781 - 2007930 - | hypothetical protein Pmen_1819 2009113 - 2008778 - | export-related chaperone CsaA Pmen_1820 2010076 - 2009330 - | AraC family transcriptional regulator TERM 1473 2009548 - 2009531 - G 74 -9.8 -3.85698 | overlap 2009543 GGTCTCGGCCAGAAA GCGCGC GTGAAA GCGCGC CACCGAAAGGCCGGC Pmen_1821 2010212 - 2011033 + | metallophosphoesterase Pmen_1822 2011030 - 2012067 + | glycosyl transferase, group 1 Pmen_1823 2013510 - 2012122 - | putative adenylate/guanylate cyclase TERM 1474 2012916 - 2012938 + g 88 -10.5 -4.30576 | overlap 2012931 ACAGGTACTTGGCCA GGTTGCGCG CCAGT CGCGCGGCC TTTTCCTGCTCGCGC Pmen_1824 2014093 - 2013776 - | membrane protein-like protein TERM 1475 2013856 - 2013866 + g 72 -6.8 -4.17048 | opp_overlap 2013855 GGGGGTATTGAAAGG TCGC CGG GCGA TTCTTTTCGAACACG Pmen_1825 2014224 - 2015237 + | AraC family transcriptional regulator Pmen_1826 2016704 - 2015253 - | TrkH family potassium uptake protein TERM 1476 2017026 - 2017045 + G 75 -9.2 -4.06993 | CCAATCCCTGCCTCA CGTGCGGC GCCT GCTGCGCG TTCTTTCGTGTGTCC Pmen_1827 2017001 - 2017372 + | hypothetical protein TERM 1477 2017556 - 2017566 + G 79 -8.2 -4.38712 | overlap 2017526 GATCACGGTCAGCTG CGCC CCT GGCG TTTTCTCACGATAGA Pmen_1828 2017430 - 2017990 + | nitroreductase Pmen_1829 2019356 - 2018025 - | integral membrane sensor signal transduction histidine kinase TERM 1478 2019319 - 2019293 - G 72 -14.4 -2.94695 | overlap 2019288 CGAGCAGCAATGACA GGCCGGCCACCA GTG CGATGGCCAGCC AGAAGGTGGCCAGAA TERM 1479 2019404 - 2019376 - R 95 -18.8 -3.36327 | GTACCTCATGCAGAA GCCGCCGGGCCC GGCAA GGGCGCGGCGGC GGGTGGTCGGGGAAG Pmen_1830 2019835 - 2019422 - | protein of unknown function, Spy-related Pmen_1831 2020653 - 2019976 - | two component transcriptional regulator Pmen_1832 2021028 - 2020657 - | hypothetical protein TERM 1480 2020779 - 2020825 + g 91 -12.8 -4.25104 | overlap 2020768 2020780 2020782 CGCTGAGCAGTGCGG GCTGCGTCTGCGCCTGGCTCTC CTT GAGCTGCAGGCGCAGGCGCTGG TTTTCCTGACGCAGG TERM 1481 2020780 - 2020824 + g 81 -16.3 -3.14848 | overlap 2020768 2020779 2020782 GCTGAGCAGTGCGGG CTGCGTCTGCGCCTGGCTCTC CTT GAGCTGCAGGCGCAGGCGCTG GTTTTCCTGACGCAG TERM 1482 2020782 - 2020822 + g 84 -17.5 -3.13504 | overlap 2020768 2020780 2020779 TGAGCAGTGCGGGCT GCGTCTGCGCCTGGCTCTC CTT GAGCTGCAGGCGCAGGCGC TGGTTTTCCTGACGC Pmen_1833 2021366 - 2021067 - | YciI-like protein TERM 1483 2021865 - 2021909 + GH 79 -10.6 -3.96148 | gap 1, opp_overlap 2021886, overlap 2021866 GCTGTGCAGCAGGCG CTCGGCGACA-GCGGCAACGC ACCG GCGCGGCCGCATTTCGCCGAA TTTCTGGTGCGGGCC TERM 1484 2021866 - 2021908 + GH 75 -14.1 -2.97475 | gap 1, opp_overlap 2021886, overlap 2021865 CTGTGCAGCAGGCGC TCGGCGACA-GCGGCAACGC ACCG GCGCGGCCGCATTTCGCCGA ATTTCTGGTGCGGGC Pmen_1834 2021439 - 2022350 + | phosphotransferase domain-containing protein Pmen_1835 2022322 - 2022990 + | Sua5/YciO/YrdC/YwlC family protein Pmen_1836 2023391 - 2023038 - | hypothetical protein TERM 1485 2023475 - 2023495 + H 74 -6.7 -4.3208 | overlap 2023477 TTTGACTCCGCCGCC GACTGGCGG GTT CCGCCAACC TTTTCCGTTGTGCCC Pmen_1837 2023561 - 2024775 + | tryptophanyl-tRNA synthetase TERM 1486 2025274 - 2025305 + G 72 -13.7 -3.02144 | gap 1 CGTCACGGTGCCCAG GCTGGACGCGCCCG AAGCG CGGGCGCG-CAAGC TGTTGCCGGACGTCA Pmen_1838 2024789 - 2025613 + | condensin subunit ScpA Pmen_1839 2025610 - 2026404 + | condensin subunit ScpB Pmen_1840 2026501 - 2026683 + | hypothetical protein TERM 1487 2027678 - 2027660 - g 72 -4.4 -4.56607 | overlap 2027670 CGATGAAGGAGAAAA CGCGCGAG AAG CTCGACCG CCTGCAGCGCAAGTC Pmen_1841 2026864 - 2028021 + | ribosomal large subunit pseudouridine synthase B TERM 1488 2028032 - 2028062 + T 91 -19.2 -3.22476 | opp_overlap 2028039, overlap 2028033 2028039 GCTGACAGTCGTTCA TGAAAAAGGGCCCT CGC AGGGCCCTTTTTCG TTACTGCTGCGTCGT TERM 1489 2028033 - 2028061 + T 95 -20.5 -2.53164 | opp_overlap 2028039, overlap 2028032 2028039 CTGACAGTCGTTCAT GAAAAAGGGCCCT CGC AGGGCCCTTTTTC GTTACTGCTGCGTCG TERM 1490 2028039 - 2028055 + T 100 -13.7 -4.90869 | opp_overlap 2028039, overlap 2028033 2028032 GTCGTTCATGAAAAA GGGCCCT CGC AGGGCCC TTTTTCGTTACTGCT TERM 1491 2028055 - 2028039 - T 100 -13.7 -4.72272 | opp_overlap 2028039 2028033 2028032 GTCGTTCATGAAAAA GGGCCCT CGC AGGGCCC TTTTTCGTTACTGCT Pmen_1842 2029005 - 2028079 - | diguanylate cyclase Pmen_1843 2030024 - 2029245 - | short chain dehydrogenase Pmen_1844 2030722 - 2030051 - | phosphoglycolate phosphatase Pmen_1845 2031426 - 2030722 - | 3-demethylubiquinone-9 3-methyltransferase Pmen_1846 2032867 - 2031548 - | N-ethylammeline chlorohydrolase mtnA 2033027 - 2034103 + | methylthioribose-1-phosphate isomerase TERM 1492 2034605 - 2034559 - g 70 -11.5 -3.36515 | overlap 2034557 CGTGATCGGTAAATA CCACCCGCACGGCGACACCGC GGTGT ACGACACCATCGTGCGGATGG CTCAGGACTTCTCCC Pmen_1848 2034329 - 2037097 + | DNA gyrase subunit A Pmen_1849 2037216 - 2038301 + | phosphoserine aminotransferase Pmen_1850 2038303 - 2039397 + | prephenate dehydratase Pmen_1851 2039485 - 2040594 + | histidinol-phosphate aminotransferase Pmen_1852 2040591 - 2042831 + | 3-phosphoshikimate 1-carboxyvinyltransferase cmk 2042828 - 2043493 + | cytidylate kinase TERM 1493 2043529 - 2043566 + F 95 -11.3 -4.65895 | opp_overlap 2043531 CGATAGGCTCGCAAG GAGGCATGCGGGAGA CCAGTCCT TGTCCCGCAGGCCTC TTTTTACATGAACGA rpsA 2043641 - 2045323 + | 30S ribosomal protein S1 TERM 1494 2045330 - 2045314 - f 71 -6.5 -4.2349 | opp_overlap 2045314 TGCTCAGATGGAAAA CCAGAAC TAA GTTCGGG TAATTCATCCAAGAA TERM 1495 2045342 - 2045373 + F 100 -17.4 -3.57462 | opp_overlap 2045343 2045349, overlap 2045343 2045349 CGGGTAATTCATCCA AGAAAAAGGCGGCC CTCG GGCCGCCTTTTTCG TTTCCGCGTCCCGTA TERM 1496 2045372 - 2045343 - f 95 -20.9 -3.09933 | opp_overlap 2045342 2045343 2045349, overlap 2045349 GGGTAATTCATCCAA GAAAAAGGCGGCC CTCG GGCCGCCTTTTTC GTTTCCGCGTCCCGT TERM 1497 2045343 - 2045372 + F 95 -20.9 -2.74263 | opp_overlap 2045343 2045349, overlap 2045342 2045349 GGGTAATTCATCCAA GAAAAAGGCGGCC CTCG GGCCGCCTTTTTC GTTTCCGCGTCCCGT TERM 1498 2045366 - 2045349 - f 100 -14.1 -5.10461 | opp_overlap 2045343 2045342 2045349, overlap 2045343 TTCATCCAAGAAAAA GGCGGCC CTCG GGCCGCC TTTTTCGTTTCCGCG TERM 1499 2045349 - 2045366 + F 100 -14.1 -4.98531 | opp_overlap 2045349 2045343, overlap 2045343 2045342 TTCATCCAAGAAAAA GGCGGCC CTCG GGCCGCC TTTTTCGTTTCCGCG TERM 1500 2045951 - 2045931 - g 70 -6 -4.19238 | GTCGTAATCCGAAAA CCGGCCAG TCGGT CCGGCTGG ATGGCAAGTTCGTGC ihfB 2045735 - 2046022 + | integration host factor subunit beta TERM 1501 2046394 - 2046408 + G 77 -2.8 -4.88407 | overlap 2046395 GCGAGCGGGTTCTGA GCGATT AGC AATCGA TTTTTCCTTGGCTGG Pmen_1856 2046242 - 2047708 + | beta-lactamase domain-containing protein Pmen_1857 2047730 - 2049046 + | UDP-glucose/GDP-mannose dehydrogenase TERM 1502 2049051 - 2049096 + F 100 -23.5 -2.72144 | gap 1, overlap 2049051 2049053 TCAAGGCCTGATCCT GGTAGACGGGGTTGGCATGCGC TAT GCGCATGCCAA-CCCGTCAATC CTTTGCGAGACATGA TERM 1503 2049051 - 2049097 + F 100 -21.1 -3.53811 | overlap 2049051 2049053 TCAAGGCCTGATCCT GG-TAGACGGGGTTGGCATGCGC TAT GCGCATGCCAA-CCCGTCAATCC TTTGCGAGACATGAA TERM 1504 2049053 - 2049094 + F 100 -22.5 -2.90615 | gap 1, overlap 2049051 2049051 AAGGCCTGATCCTGG TAGACGGGGTTGGCATGCGC TAT GCGCATGCCAA-CCCGTCAA TCCTTTGCGAGACAT Pmen_1858 2049108 - 2050064 + | oxidoreductase domain-containing protein Pmen_1859 2050069 - 2050653 + | Serine acetyltransferase-like protein TERM 1505 2051439 - 2051461 + G 81 -7.6 -4.64676 | TATGCCTGTCTGTTG GGGGCTGC TGGTATT GCCGCCCC TTTTATTGAAGATCA Pmen_1860 2050650 - 2051738 + | DegT/DnrJ/EryC1/StrS aminotransferase Pmen_1861 2051770 - 2053533 + | citrate transporter Pmen_1862 2053569 - 2054195 + | adenylylsulfate kinase Pmen_1863 2054197 - 2055438 + | polysaccharide biosynthesis protein Pmen_1864 2055952 - 2055683 - | hypothetical protein Pmen_1865 2056102 - 2056938 + | hypothetical protein Pmen_1867 2059055 - 2057754 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1506 2058122 - 2058138 + g 79 -2.9 -5.08601 | opp_overlap 2058123, overlap 2058123 GGTGCTCATCTGCAA ACAGCTG GAA CAGTTGC TTTTTGTTGGCGTCA TERM 1507 2058466 - 2058477 + g 87 -7.2 -5.06414 | opp_overlap 2058466 2058465 AGCACATCGAGCAAG CGGG CCGG CCCG TTTTTGTTACGCACG TERM 1508 2060411 - 2060422 + G 74 -2.2 -4.80417 | gap 1 CGAACAAATGTGGTT GCGCC AGC GG-GC TTTGTTCTTTTTCTA Pmen_1868 2059770 - 2060648 + | glycosyl transferase family protein Pmen_1869 2060651 - 2061886 + | glycosyl transferase, group 1 TERM 1509 2061914 - 2061933 + G 83 -5 -5.04265 | gap 1, overlap 2061915 GGTCCTAGGCGTTAC TGGCA-TGC TTG GCAATGCCG TTTTTCGTGTTTTTT TERM 1510 2062453 - 2062464 + G 79 -2.2 -5.055 | overlap 2062443 ACGGGGTCTTGGGTT TTGC CAGG GCAG TTTTTTCCGGCTTGC Pmen_1870 2061888 - 2062745 + | dTDP-4-dehydrorhamnose reductase Pmen_1871 2062780 - 2063547 + | hypothetical protein Pmen_1872 2063547 - 2064557 + | polysaccharide biosynthesis protein CapD Pmen_1873 2064550 - 2065677 + | UDP-N-acetylglucosamine 2-epimerase Pmen_1874 2065680 - 2066642 + | NAD-dependent epimerase/dehydratase Pmen_1875 2066639 - 2067655 + | glycosyl transferase family protein Pmen_1876 2067652 - 2068239 + | hypothetical protein TERM 1511 2068986 - 2068975 - g 87 -7.2 -5.06414 | opp_overlap 2068974 2068975 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 1512 2069330 - 2069314 - g 79 -2.9 -5.08601 | opp_overlap 2069315, overlap 2069315 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_1877 2068397 - 2069698 + | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1513 2070016 - 2070042 + G 79 -2.8 -5.00339 | overlap 2070012 2070019 2070020 ATTGGTATCGCGGGC CGACGGCTCTCG TTC CGAGGTCCATGG TTTTTAATTATTGGT Pmen_1878 2069808 - 2071676 + | polysaccharide biosynthesis protein CapD TERM 1514 2071720 - 2071739 + F 71 -7.8 -4.03234 | opp_overlap 2071719 2071720 GTCTAGTTTGAAAAG CGAGGCCA TTGA TTGCCTCG TTTCTATAAACAAAG Pmen_1879 2071766 - 2072089 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1515 2072112 - 2072130 + T 100 -16 -5.0925 | CGGCGTTGCCATTTG GGCCGGTC TTT GACCGGCC TTTTTGCTTTTAGAG TERM 1516 2072226 - 2072242 + T 76 -9.4 -4.05026 | opp_overlap 2072226 GCAGGCAATAAAAAA CCCAGC GCTAG GCTGGG TTCTTTGAATTTGGC TERM 1517 2072242 - 2072226 - T 100 -9.4 -5.4833 | opp_overlap 2072226 GCAGGCAATAAAAAA CCCAGC GCTAG GCTGGG TTCTTTGAATTTGGC Pmen_1880 2073262 - 2072456 - | hypothetical protein TERM 1518 2072549 - 2072563 + g 75 -2.8 -4.73388 | GCCGCTGTCCTCGCG CTTGAG GCG TTCGAG TTTTTCCTCCAGCTT Pmen_1881 2074291 - 2073299 - | lysophospholipase-like protein TERM 1519 2073692 - 2073733 + g 73 -12.1 -3.35679 | GCTGGCGAGGATGCG CCGGCTCTGCGCCAGTTGC GCAG GCGGCAGGCGCATGGCCAG TTGTGCGTCGAGCAC Pmen_1882 2074415 - 2075506 + | chorismate synthase TERM 1520 2076130 - 2076172 + G 71 -9 -3.76402 | gap 1, overlap 2076131 GCTTCTGGGTGCCCA ACGCCCAGC-CGCTGCTGC GCCCCG GCAGCGCCGAGCAGGGCGG TTTCCTGCGTCAGCT Pmen_1883 2075592 - 2076764 + | major facilitator transporter Pmen_1884 2076761 - 2077297 + | hypothetical protein Pmen_1885 2077365 - 2077556 + | hypothetical protein Pmen_1886 2077517 - 2078110 + | putative phosphohistidine phosphatase, SixA Pmen_1887 2078629 - 2078132 - | methylated-DNA--protein-cysteine methyltransferase TERM 1521 2078498 - 2078514 + g 74 -10.1 -3.76224 | GGCATCCAGTTCGCG GCTGGCG GGT TGCCAGC TTTCCTCGATGCGCC Pmen_1888 2079512 - 2078634 - | alcohol dehydrogenase TERM 1522 2079527 - 2079541 + r 72 -11.4 -3.28712 | TGCCTCGCACCCTAG CTCGCC GTT GGCGAG TTGTCAGCGCGAAGA Pmen_1889 2080837 - 2079755 - | AraC family transcriptional regulator Pmen_1890 2080870 - 2082345 + | flavoprotein involved in K+ transport-like protein Pmen_1891 2082329 - 2083258 + | alpha/beta hydrolase domain-containing protein Pmen_1892 2083258 - 2084019 + | short chain dehydrogenase TERM 1523 2084051 - 2084067 + F 74 -10.9 -3.53012 | opp_overlap 2084065 TGGCCGCTGGTCGTC GCCTTTG TCA CAAAGGC TTTCCAGGCCGGGCG Pmen_1893 2084286 - 2084630 + | hypothetical protein Pmen_1895 2086017 - 2085481 - | DinB family protein Pmen_1896 2086603 - 2086043 - | GCN5-related N-acetyltransferase Pmen_1897 2087330 - 2086629 - | short-chain dehydrogenase/reductase SDR Pmen_1898 2087935 - 2087573 - | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_1899 2088775 - 2088029 - | hypothetical protein TERM 1524 2088374 - 2088409 + g 73 -9 -3.91144 | opp_overlap 2088383 AGTGCGTTTTACCTT CAGATGGAAGCCGGAG AGCA TTCCGCCTTCTATCGG TTTATAAGCTATACC TERM 1525 2088975 - 2088985 + r 80 -3.2 -5.05782 | GCGTTCGTAGCTGAT CATG CGG CGTG TTTTTTGGCGTAGCT Pmen_1900 2089718 - 2089212 - | hypothetical protein Pmen_1901 2090124 - 2089804 - | hypothetical protein TERM 1526 2090283 - 2090309 + r 100 -15.1 -4.42464 | GAGGGGAGACGGGCA GGACGCAGCGG CGGAA CCGCTGCGCCC TTTGTTTCAGCGGTT Pmen_1902 2091881 - 2090316 - | methyl-accepting chemotaxis sensory transducer TERM 1527 2090993 - 2091019 + g 70 -8.6 -3.90112 | TACGGGCGACGTTGC TGGCCACTTCCA GAG TGGTGGCGGCCA TTTCGTTGACCGCCG TERM 1528 2092050 - 2092026 - R 100 -22.9 -3.59979 | opp_overlap 2092029 TGGCCCGACGGGAAA GCCCTGCCGCC TGG GGCGGCAGGGC TGCTGCATCAGCTGG acnA 2094799 - 2092058 - | aconitate hydratase TERM 1529 2093355 - 2093371 + g 74 -5.7 -4.57341 | GAGCTCTTCACCCAG GGCTGGC GCT GCAGGCC TTTTTCCACCGCCTT Pmen_1904 2095047 - 2096102 + | putative RNA 2'-O-ribose methyltransferase Pmen_1905 2096319 - 2096570 + | cell developmental protein SirA Pmen_1906 2097735 - 2096662 - | hypothetical protein TERM 1530 2097615 - 2097655 + g 80 -15.3 -3.28712 | opp_overlap 2097614 2097615 CGAAGGCGGCGAAAC CGTCGGCCTCGAGCGCCCG GTT CAGGCGTTCGAGGTAGTCG TTCTGCAGCGCCAGG Pmen_1907 2099150 - 2097777 - | MATE efflux family protein Pmen_1908 2099301 - 2100431 + | erythronate-4-phosphate dehydrogenase TERM 1531 2100488 - 2100431 - f 76 -15 -2.59431 | gap 3, opp_overlap 2100401 2100400, overlap 2100427 CGCTGCCACAACGTA GGGTGCGCCGTGCGCA-C-CG-GCCGTTA TCG TAGGGGCCCGCAATGCGCACAGCGCACCC TACGATAACGCCCTA TERM 1532 2100519 - 2100557 + F 84 -9.9 -4.25848 | gap 1, opp_overlap 2100528 2100533, overlap 2100521 TCGATGTGCCTTATT TTGC-AGCAATTAAATTG CATG CAATTTAATTGCTCGCTA TTTTGCTCCCCACTT TERM 1533 2100521 - 2100555 + F 85 -12.5 -3.73042 | gap 1, opp_overlap 2100528 2100533, overlap 2100519 GATGTGCCTTATTTT GC-AGCAATTAAATTG CATG CAATTTAATTGCTCGC TATTTTGCTCCCCAC Pmen_1909 2100597 - 2101082 + | peroxiredoxin Pmen_1910 2101079 - 2101537 + | MarR family transcriptional regulator Pmen_1911 2103890 - 2101527 - | integral membrane sensor hybrid histidine kinase Pmen_1912 2103957 - 2104847 + | hypothetical protein Pmen_1913 2104844 - 2105326 + | putative GAF sensor protein Pmen_1914 2106115 - 2105453 - | glutathione S-transferase domain-containing protein Pmen_1915 2106935 - 2106168 - | hypothetical protein TERM 1534 2107573 - 2107542 - R 100 -23.2 -4.41348 | opp_overlap 2107542 2107548, overlap 2107548 CCCGCTCCAAATAAA CGAAAACGCCGCTC AATC GAGCGGCGTTTTCG TTTCTGCCGTTTGCA TERM 1535 2107542 - 2107573 + r 100 -23.2 -3.95219 | opp_overlap 2107542 2107548, overlap 2107548 CCCGCTCCAAATAAA CGAAAACGCCGCTC AATC GAGCGGCGTTTTCG TTTCTGCCGTTTGCA TERM 1536 2107548 - 2107567 + r 100 -15 -4.61873 | opp_overlap 2107548 2107542, overlap 2107542 CCAAATAAACGAAAA CGCCGCTC AATC GAGCGGCG TTTTCGTTTCTGCCG TERM 1537 2107567 - 2107548 - R 100 -15 -4.72863 | opp_overlap 2107542 2107548, overlap 2107542 CCAAATAAACGAAAA CGCCGCTC AATC GAGCGGCG TTTTCGTTTCTGCCG TERM 1538 2107630 - 2107593 - R 78 -15.8 -2.57132 | gap 2, opp_overlap 2107594 2107599, overlap 2107599 TGCCGTTTGCACAAT GA-AAAAGGCCCGC-CGG TTAG CCGTGCGGGCCTTTTGTC TGTCGGCCGGTCAGT TERM 1539 2107594 - 2107628 + r 79 -15.1 -2.87564 | gap 1, opp_overlap 2107593 2107599, overlap 2107599 GCCGTTTGCACAATG AAAAAGGCCCGC-CGG TTAG CCGTGCGGGCCTTTTG TCTGTCGGCCGGTCA TERM 1540 2107599 - 2107623 + r 100 -15 -4.60797 | gap 1, opp_overlap 2107599 2107593, overlap 2107594 TTGCACAATGAAAAA GGCCCGC-CGG TTAG CCGTGCGGGCC TTTTGTCTGTCGGCC TERM 1541 2107623 - 2107599 - R 100 -15 -4.93365 | gap 1, opp_overlap 2107594 2107599, overlap 2107593 TTGCACAATGAAAAA GGCCCGC-CGG TTAG CCGTGCGGGCC TTTTGTCTGTCGGCC Pmen_1916 2108048 - 2107641 - | hypothetical protein TERM 1542 2108104 - 2108073 - R 82 -9.5 -4.35524 | gap 1, opp_overlap 2108100 TCCTGAAAGGTAAAA CGGGCGC-AGGA GTATAGAGT TCCTGGCGCCCG CTGTCCCGCTTGGGT fadE 2110596 - 2108149 - | acyl-CoA dehydrogenase TERM 1543 2108335 - 2108349 + g 72 -11.4 -3.54741 | GCTGCCGTCCTTGAG CGCCTG GTT CAGGCG TTTGCGGGCGTCCTG Pmen_1918 2110737 - 2111399 + | transglutaminase-like enzymes putative cysteine protease-like protein TERM 1544 2111958 - 2111940 - g 78 -10.2 -4.07568 | CGGCCTGTGGGAAAA GCGCGACG TGG CCTCGCGC GAGCTGTCCGGTGGC Pmen_1919 2111554 - 2112486 + | ABC transporter related Pmen_1920 2112483 - 2113277 + | ABC-2 type transporter TERM 1545 2113972 - 2113947 - g 72 -11.7 -3.50393 | TCGCATTCCACAGAA GGCCGTGGCCC AGGT GCGCCTCGGCC AGACCGTGGAAGTCA Pmen_1921 2113369 - 2114391 + | RND family efflux transporter MFP subunit TERM 1546 2115409 - 2115435 + G 74 -2.2 -4.72029 | overlap 2115413 2115415 CCATCTGGGAGGCAG TGGCGCTGGTCA TCC TGATCATCTTCA TTTTCTTGCGTTCGC Pmen_1922 2114388 - 2117456 + | acriflavin resistance protein TERM 1547 2117573 - 2117602 + F 70 -4.9 -4.56597 | gap 1 TCGCTGTGGGTGCGG CTGGGCG-GTCAAC CCG GTAAACTCGCCCGG TTTTTCGCCAACCCG TERM 1548 2118200 - 2118172 - g 77 -13.1 -3.54543 | AGCCACCTGCTGAAA TCCAACTGCCCGG TCA CCGGTCAGCCGGA CTGGGGCAGCCTGGT queF 2117629 - 2118459 + | 7-cyano-7-deazaguanine reductase TERM 1549 2118496 - 2118471 - T 100 -16.1 -4.77157 | GTAAGCCATGAAAAA GCCGCCAGCCC GAAA GGGGTGGCGGC TCCGGGCTTTCCGAC Pmen_1924 2118781 - 2118515 - | hypothetical protein Pmen_1925 2119619 - 2118900 - | phosphatase/phosphohexomutase-like protein Pmen_1926 2120092 - 2119682 - | thioesterase superfamily protein Pmen_1927 2120199 - 2120903 + | VacJ family lipoprotein TERM 1550 2120909 - 2120955 + T 77 -14.7 -2.77043 | gap 2, opp_overlap 2120923, overlap 2120923 CGATTTCTGAGTTCG GCAGGC--ATGAAAAAGGCGGCT TAA AGCCGCCTTTTTCGTAAGCATGC GTTTCAGCTCATCGA TERM 1551 2120923 - 2120939 + T 100 -13.7 -4.72986 | opp_overlap 2120923, overlap 2120909 GGCAGGCATGAAAAA GGCGGCT TAA AGCCGCC TTTTTCGTAAGCATG TERM 1552 2120939 - 2120923 - T 100 -13.7 -4.7497 | opp_overlap 2120923 2120909 GGCAGGCATGAAAAA GGCGGCT TAA AGCCGCC TTTTTCGTAAGCATG Pmen_1928 2121258 - 2120959 - | type IV pilus assembly PilZ Pmen_1929 2121472 - 2122656 + | response regulator receiver protein Pmen_1930 2122653 - 2123147 + | anti-sigma-factor antagonist TERM 1553 2123164 - 2123187 + T 73 -13.2 -2.70932 | gap 1 CTCCCTGGTTTTTCC GTCGGGTGCGC TGT GCGCACC-GAC TGATTCAAAGAAAGC TERM 1554 2123229 - 2123201 - T 70 -5.1 -4.46514 | opp_overlap 2123202, overlap 2123202 ACTGATTCAAAGAAA GCCTCAGGTGCGC ACG GCGCACCCTACGT ATTGATCTCGTAGTA TERM 1555 2123251 - 2123277 + T 100 -15.8 -5.4505 | opp_overlap 2123252, overlap 2123252 CTCGTAGTATTCGAA AGGGGCGTCAGC TTG GCTGGCGCCCCC TTTTTTGTTCAGGCC TERM 1556 2123252 - 2123276 + T 100 -19.3 -3.86307 | opp_overlap 2123252, overlap 2123251 TCGTAGTATTCGAAA GGGGCGTCAGC TTG GCTGGCGCCCC CTTTTTTGTTCAGGC TERM 1557 2123276 - 2123252 - T 100 -17.1 -3.62096 | opp_overlap 2123252 2123251 TCGTAGTATTCGAAA GGGGCGTCAGC TTG GCTGGCGCCCC CTTTTTTGTTCAGGC Pmen_1931 2124212 - 2123286 - | transaldolase B Pmen_1932 2124409 - 2124738 + | ferric uptake regulator family protein Pmen_1933 2125703 - 2124708 - | tRNA-dihydrouridine synthase A dnaE2 2128889 - 2125809 - | error-prone DNA polymerase TERM 1558 2126231 - 2126249 + g 70 -10.2 -3.62597 | overlap 2126232 CTTCGCCGACCGTGG GCCGTGGC AGC GCCACGGG TTCTTCACGGCTGGA TERM 1559 2127192 - 2127176 - G 72 -13.7 -3.04263 | ACTCGATCTGGAACA CGCCGAC GGT GTCGGCG CGGCTGATCATGGCG TERM 1560 2128039 - 2128058 + g 70 -10.6 -3.61715 | GTGCTGGCGCCATCC GGCCAGCG CCAG CGCAGGCC TTCTTCGACCCGATG Pmen_1935 2130307 - 2128886 - | nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein Pmen_1936 2130926 - 2130309 - | hypothetical protein TERM 1561 2130940 - 2130969 + H 77 -10.9 -3.63895 | opp_overlap 2130939 2130938, overlap 2130945 ATGGCGGTGAAAACT CCAAATACTGTCT ATGC ATACAGTATTTGG TTTGCCGTGGTTGCG TERM 1562 2131238 - 2131267 + G 75 -6.9 -4.38154 | overlap 2131239 GGCGGGCAGTCACGA CGAGCCGGCCGCG TACC CGGGGCTGGCGCA TTTTCTCGAGCATCT TERM 1563 2133386 - 2133366 - g 73 -12.5 -3.37344 | overlap 2133368 GCCGGACTGAATGAA GAGCACCCG CAA CGGGTGCGC CAGGCATTGGCTGAG TERM 1564 2133384 - 2133368 - g 75 -13.7 -3.25652 | overlap 2133366 CGGACTGAATGAAGA GCACCCG CAA CGGGTGC GCCAGGCATTGGCTG Pmen_1937 2131110 - 2133494 + | coenzyme PQQ biosynthesis protein PqqF TERM 1565 2133537 - 2133574 + F 72 -11.9 -3.28712 | overlap 2133550 TCGGCGGCCTGTGGT GCGCGCAGCGCACCC TACGGGAT GGATGCGCCGTGCGC TTCTACGCCCAAGGA TERM 1566 2133713 - 2133679 - f 79 -15.1 -2.90496 | gap 1, opp_overlap 2133668 2133667, overlap 2133688 2133689 GGGCGCGCCAAAGCA GCAGGCAA-ACGCTGC CAAG GCAGCGTATGGCCTGC CCTGGCGCCTTTCGA TERM 1567 2133703 - 2133688 - f 73 -10.4 -3.70438 | opp_overlap 2133668 2133667, overlap 2133679 2133689 AAAGCAGCAGGCAAA CGCTGC CAAG GCAGCG TATGGCCTGCCCTGG Pmen_1938 2133783 - 2134967 + | hypothetical protein TERM 1568 2134982 - 2135011 + F 100 -19.3 -5.4833 | opp_overlap 2134982 AGCACCGTTGCACAA GGCCGGGCAGGGG ACGA CCTCTGCCCGGTC TTTTTTGTTCCATGG TERM 1569 2135011 - 2134982 - f 86 -14.9 -3.2963 | opp_overlap 2134982 AGCACCGTTGCACAA GGCCGGGCAGGGG ACGA CCTCTGCCCGGTC TTTTTTGTTCCATGG TERM 1570 2136319 - 2136349 + G 73 -9.6 -3.91897 | opp_overlap 2136322 CCGCCTGGAGATCGA GAACGACAGCGGCA GCC TGCCGGTGTCGGCC TTTCTGCGTCAGCAG TERM 1571 2136346 - 2136322 - g 77 -14.3 -3.39327 | opp_overlap 2136319 CCTGGAGATCGAGAA CGACAGCGGCA GCC TGCCGGTGTCG GCCTTTCTGCGTCAG Pmen_1939 2135309 - 2136463 + | hypothetical protein TERM 1572 2139158 - 2139147 - g 87 -7.2 -5.06414 | opp_overlap 2139146 2139147 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 1573 2139502 - 2139486 - g 79 -2.9 -5.08601 | opp_overlap 2139487, overlap 2139487 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_1941 2138569 - 2139870 + | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1574 2140608 - 2140557 - T 100 -29.6 -2.83715 | opp_overlap 2140593 TGCAGGATCATCATA GGGTGCGCCATGCGCACCGAGC GTACGGGG GCTTGGTGCGCACGGCGCACCC TGCGGATTCGTCGCC Pmen_1942 2141058 - 2140639 - | GCN5-related N-acetyltransferase Pmen_1943 2141767 - 2141102 - | two component LuxR family transcriptional regulator Pmen_1944 2142366 - 2141791 - | hypothetical protein Pmen_1945 2143286 - 2142495 - | ABC-2 type transporter Pmen_1946 2144101 - 2143283 - | ABC transporter related Pmen_1947 2145063 - 2144098 - | YVTN beta-propeller repeat-containing protein Pmen_1948 2146320 - 2145145 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 1575 2146161 - 2146115 - G 73 -6.4 -4.36914 | CTCTGCTTGAGAAAA CGCC-CGGTGCTGTTGCTGTCG GCAAT CGCCAGCT-CGGCGCCGCGGCG GCCGGCGTCCAGCGG TERM 1576 2146478 - 2146468 - H 75 -2.4 -5.00467 | CCAATAAGAACAAAA GGTG AAC CCCC ATGCGCATCATCAAA Pmen_1949 2146479 - 2146916 + | hypothetical protein TERM 1577 2147469 - 2147500 + G 78 -14.4 -3.53811 | gap 1, opp_overlap 2147468, overlap 2147470 CGCCTGCCCAACCAC GGCCTGGCCGAGGCG CAG CGCCT-GGCCGGGCA TTTCAACGCCATGGC TERM 1578 2147470 - 2147499 + G 85 -17.9 -2.72144 | gap 1, opp_overlap 2147468, overlap 2147469 GCCTGCCCAACCACG GCCTGGCCGAGGCG CAG CGCCT-GGCCGGGC ATTTCAACGCCATGG TERM 1579 2147755 - 2147726 - g 70 -11.5 -3.41602 | gap 1, opp_overlap 2147734 2147734 CCTACTCGACGACAA CTGCGAACG-CCTG CAG CAGGGCTTTCGCAG CCTGATCCGCGACCT Pmen_1950 2146917 - 2148182 + | integral membrane sensor signal transduction histidine kinase Pmen_1951 2148179 - 2148829 + | two component LuxR family transcriptional regulator TERM 1580 2149451 - 2149441 - g 70 -2.4 -4.58395 | CGCACTGTCGAAAAA GCTG GAG CTGC CGGAGGATGCTTCGG Pmen_1952 2149004 - 2149543 + | PBP family phospholipid-binding protein TERM 1581 2149596 - 2149630 + F 75 -8.5 -4.1891 | overlap 2149594 2149602 AGGCCGCATCAGTTG GGTGAAGCCCGTCCT TACGC AGGACGGGCTTGTCG TTTCTATTCAGGCAG TERM 1582 2149602 - 2149624 + F 90 -14.9 -3.68709 | overlap 2149594 2149596 CATCAGTTGGGTGAA GCCCGTCCT TACGC AGGACGGGC TTGTCGTTTCTATTC Pmen_1953 2149686 - 2150492 + | AraC family transcriptional regulator Pmen_1954 2151914 - 2150613 - | glucose/sorbosone dehydrogenase-like protein Pmen_1955 2152339 - 2151911 - | hypothetical protein Pmen_1956 2153242 - 2152583 - | pentapeptide repeat-containing protein TERM 1583 2153298 - 2153342 + r 77 -11.4 -3.66178 | gap 1, opp_overlap 2153304 2153306, overlap 2153299 GAAGCCGCTCCTACA AGCAAAGACGCATGGCGCGCC TTGC GGTGCGCCATGCGT-TGGGCC TTTAGCGTTGGGCGC TERM 1584 2153299 - 2153341 + r 77 -14.9 -2.79492 | gap 1, opp_overlap 2153304 2153306, overlap 2153298 AAGCCGCTCCTACAA GCAAAGACGCATGGCGCGCC TTGC GGTGCGCCATGCGT-TGGGC CTTTAGCGTTGGGCG TERM 1585 2153337 - 2153304 - R 100 -16.7 -3.9941 | opp_overlap 2153299 2153298, overlap 2153306 GCTCCTACAAGCAAA GACGCATGGCGCGCC TTGC GGTGCGCCATGCGTT GGGCCTTTAGCGTTG TERM 1586 2153335 - 2153306 - R 100 -19.3 -3.5891 | opp_overlap 2153299 2153298, overlap 2153304 TCCTACAAGCAAAGA CGCATGGCGCGCC TTGC GGTGCGCCATGCG TTGGGCCTTTAGCGT Pmen_1957 2155206 - 2153344 - | Pyrrolo-quinoline quinone TERM 1587 2154603 - 2154617 + g 74 -5.6 -4.51097 | AGCTGCCGTGGATCA GCAGCA CCT TGCCGC TTTTCTGATCCTTCA TERM 1588 2155308 - 2155290 - H 78 -7.4 -4.65895 | opp_overlap 2155294 2155296, overlap 2155291 GCGCCTACGGAAAAA CTCCCG CCTTCAC CGGGAG GATTTCCCGGTCGGG Pmen_1958 2155497 - 2155916 + | hypothetical protein Pmen_1959 2156065 - 2156937 + | extracellular solute-binding protein Pmen_1960 2156959 - 2157708 + | hypothetical protein TERM 1589 2157892 - 2157922 + G 100 -12.6 -4.36914 | CCGACAACTTTGCAA CCGACAATGGCGGT AAT ATCGTCAATGTCGG TTTTATCGAAACCGC Pmen_1961 2157765 - 2158694 + | beta-lactamase domain-containing protein Pmen_1962 2159655 - 2159269 - | hypothetical protein Pmen_1963 2159874 - 2161649 + | Pyrrolo-quinoline quinone TERM 1590 2161664 - 2161696 + F 100 -22.1 -3.57263 | opp_overlap 2161670, overlap 2161665 2161667 ATCGGTTGATGTGGC AGACGATGGCCGGAC TTT GTCCGGCCATCGTCG TTTCCGGCTCCCACT TERM 1591 2161665 - 2161695 + F 100 -25.6 -2.74144 | opp_overlap 2161670, overlap 2161664 2161667 TCGGTTGATGTGGCA GACGATGGCCGGAC TTT GTCCGGCCATCGTC GTTTCCGGCTCCCAC TERM 1592 2161667 - 2161693 + F 100 -22.4 -2.91695 | opp_overlap 2161670, overlap 2161665 2161664 GGTTGATGTGGCAGA CGATGGCCGGAC TTT GTCCGGCCATCG TCGTTTCCGGCTCCC TERM 1593 2161690 - 2161670 - f 83 -16.9 -2.62616 | opp_overlap 2161667 2161665 2161664 TGATGTGGCAGACGA TGGCCGGAC TTT GTCCGGCCA TCGTCGTTTCCGGCT Pmen_1964 2161982 - 2163502 + | aldehyde dehydrogenase TERM 1594 2163677 - 2163704 + F 90 -14.8 -3.53012 | gap 1, opp_overlap 2163678, overlap 2163678 CCGATGCATCCACAT AGCGGCGCGCTCG CTC CG-GCGCGCCGCC TTTGCACGGCGAAGA TERM 1595 2163703 - 2163678 - f 86 -18.3 -2.91912 | gap 1, opp_overlap 2163677 2163678 CGATGCATCCACATA GCGGCGCGCTCG CTC CG-GCGCGCCGC CTTTGCACGGCGAAG TERM 1596 2163678 - 2163703 + F 86 -18.3 -2.71712 | gap 1, opp_overlap 2163678, overlap 2163677 CGATGCATCCACATA GCGGCGCGCTCG CTC CG-GCGCGCCGC CTTTGCACGGCGAAG TERM 1597 2163782 - 2163797 + F 100 -11.8 -5.4505 | AGACCCTTATCGCGA CGCGGC TTCG GCCGCG TTTTTTATTGGCGCA pqqA 2163985 - 2164056 + | coenzyme PQQ synthesis protein PqqA TERM 1598 2164126 - 2164141 + G 72 -11.8 -3.54424 | TCCAGATTCTCGGTT CCGCCG CCGG CGGCGG TTTCCCCCAGTGGAA Pmen_1966 2164104 - 2165018 + | pyrroloquinoline quinone biosynthesis protein PqqB Pmen_1967 2165042 - 2165794 + | pyrroloquinoline quinone biosynthesis protein PqqC Pmen_1968 2165791 - 2166096 + | pyrroloquinoline quinone biosynthesis protein PqqD Pmen_1969 2166068 - 2167222 + | pyrroloquinoline quinone biosynthesis protein PqqE TERM 1599 2167454 - 2167478 + G 95 -17.1 -3.76224 | ACGGCGGCGGCAACT GCTGCGCCACG GAG CGGGGCGCAGC TTTCGTCAATGAGCG TERM 1600 2167609 - 2167577 - g 74 -7.6 -4.21607 | gap 1, overlap 2167578 CTGATTCAAGAGAAA TCGCGGCTGAAGCGG AATG CCGC-CCAGCCGCTC CTACGAATATTGAGC Pmen_1970 2167210 - 2169168 + | peptidase S9 prolyl oligopeptidase TERM 1601 2170300 - 2170310 + G 84 -6.8 -4.83169 | overlap 2170289 ACGGTGTCGGCACGT CGGA CAT TCCG TTTTTGTCCAGCCAT Pmen_1971 2169246 - 2170409 + | iron-containing alcohol dehydrogenase TERM 1602 2170762 - 2170745 - g 70 -9.8 -3.72576 | TGCTCGGCTACGAAA CGCGCC TGCGCC GGCGCG ATGGCAGCACCATCG Pmen_1972 2170393 - 2172117 + | PAS/PAC sensor hybrid histidine kinase Pmen_1973 2172198 - 2172605 + | hypothetical protein TERM 1603 2173262 - 2173206 - g 100 -20.7 -3.73953 | ACGACCTCGAGCAAA CCGGCAATGCCCAGCCGGCGCGGCG TGCCTAT CGCCGGGCCAGCGAGGCCTGGCCGG AGCAGGCGCTGCCCT Pmen_1974 2172590 - 2173543 + | hypothetical protein TERM 1604 2173552 - 2173581 + T 100 -22.3 -3.18735 | opp_overlap 2173552, overlap 2173558 TCCGTGATGCACAAA CGATAACGGCGCC CTCG GGCGCCGTTATCG TTCATGGGCTGTTGC TERM 1605 2173581 - 2173552 - T 100 -22.3 -3.91897 | opp_overlap 2173552 2173558 TCCGTGATGCACAAA CGATAACGGCGCC CTCG GGCGCCGTTATCG TTCATGGGCTGTTGC TERM 1606 2173558 - 2173575 + T 86 -14.1 -3.54029 | opp_overlap 2173552, overlap 2173552 ATGCACAAACGATAA CGGCGCC CTCG GGCGCCG TTATCGTTCATGGGC Pmen_1975 2174880 - 2173597 - | FAD dependent oxidoreductase TERM 1607 2174884 - 2174895 + H 83 -4.4 -5.04249 | CGTGTGCGCCATTTT GAAC CTCT GTTC TTTATTTTTTACGAA TERM 1608 2175148 - 2175180 + H 100 -17.9 -4.17089 | opp_overlap 2175155, overlap 2175155 TGCCTACCAAATCGA TAAGAAAGGGGTCGC CAA GCGACCCCTTTTTTG TTTTCCGAATTTGCG TERM 1609 2175173 - 2175155 - H 100 -16 -4.37211 | opp_overlap 2175148 2175155 CAAATCGATAAGAAA GGGGTCGC CAA GCGACCCC TTTTTTGTTTTCCGA TERM 1610 2175155 - 2175173 + H 100 -16 -5.79595 | opp_overlap 2175155, overlap 2175148 CAAATCGATAAGAAA GGGGTCGC CAA GCGACCCC TTTTTTGTTTTCCGA TERM 1611 2175916 - 2175906 - g 76 -8.2 -4.2558 | opp_overlap 2175901 2175906 CATGCCGGACGAAAA GGCC ATG GGCC TGTACTTTCATGAAG thrS 2175406 - 2177328 + | threonyl-tRNA synthetase infC 2177346 - 2177879 + | translation initiation factor IF-3 rpmI 2177940 - 2178134 + | 50S ribosomal protein L35 TERM 1612 2178486 - 2178473 - g 79 -3.7 -4.88407 | opp_overlap 2178472 2178456 GCAGTGAACGAAAAA GCGGC GTTT GCTGC GATTGTCGAGAAAGC rplT 2178164 - 2178520 + | 50S ribosomal protein L20 TERM 1613 2178597 - 2178563 - f 88 -13.7 -3.66178 | opp_overlap 2178565, overlap 2178565 GGTGGCAACGTCAAA GATAGGGGAAGAGCC TTAAC AGCTCTTCCCCTATT TCGTATCTGGAGTCT TERM 1614 2178565 - 2178595 + F 95 -15.6 -3.88766 | opp_overlap 2178565 2178563 TGGCAACGTCAAAGA TAGGGGAAGAGC CTTAACA GCTCTTCCCCTA TTTCGTATCTGGAGT TERM 1615 2178595 - 2178565 - f 89 -16.3 -3.41222 | opp_overlap 2178565, overlap 2178563 TGGCAACGTCAAAGA TAGGGGAAGAGCC TTAAC AGCTCTTCCCCTA TTTCGTATCTGGAGT pheS 2178617 - 2179633 + | phenylalanyl-tRNA synthetase subunit alpha pheT 2179678 - 2182056 + | phenylalanyl-tRNA synthetase subunit beta ihfA 2182060 - 2182362 + | integration host factor subunit alpha Pmen_1983 2182343 - 2182699 + | MerR family transcriptional regulator TERM 1616 2182870 - 2182891 + F 100 -14.5 -5.36441 | opp_overlap 2182870 AATCCCTACATTAGA GCCTGGTCA GTGA TGACCAGGC TTTTTTGTATCAGGG TERM 1617 2182891 - 2182870 - f 79 -14.5 -2.85847 | opp_overlap 2182870 AATCCCTACATTAGA GCCTGGTCA GTGA TGACCAGGC TTTTTTGTATCAGGG Pmen_1984 2183139 - 2183462 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1618 2183485 - 2183503 + F 100 -16 -4.67038 | overlap 2183501 GGTTATCACCATCAG GGCCGGTC GTT GACCGGCC TTTTCGTTTTCGGGC TERM 1619 2185388 - 2185434 + G 75 -11.5 -3.73072 | gap 2, opp_overlap 2185365 CGGCACCTGCAGCAG CTGCGC-GA-GCCGGCCACGCCG GTG CGGTGGGGCGAGCGTCTGCGCAG TTTGCTCGACGACTT Pmen_1985 2183561 - 2187037 + | DNA helicase/exodeoxyribonuclease V, gamma subunit Pmen_1986 2187034 - 2190663 + | DNA helicase/exodeoxyribonuclease V, beta subunit TERM 1620 2191028 - 2191052 + G 72 -13.5 -3.08197 | GCTGGAGTCCGAAGG TGCGCCGCTGG TGC TCAGCGGCGCC TGTCTATATATGAGG TERM 1621 2191843 - 2191805 - g 70 -10.3 -3.63073 | gap 1, opp_overlap 2191805 2191802, overlap 2191806 GATATCCGGTAACAA GGCG-CTGGCGCAGCATA TCGT CATGCTGCGCCACTCGCG TCGTTTCGGCAGTGG Pmen_1987 2190660 - 2192690 + | DNA helicase/exodeoxyribonuclease V, alpha subunit TERM 1622 2198482 - 2198515 + T 100 -20.5 -4.09117 | opp_overlap 2198486, overlap 2198486 GTCAAGCTCCTATAC GAAACCCCAGATCTC GAAA GAGGTCTGGGGTTTC TTCTTTGTGGCTGGA TERM 1623 2198511 - 2198486 - T 91 -13.3 -3.83205 | opp_overlap 2198482 2198486 AGCTCCTATACGAAA CCCCAGATCTC GAAA GAGGTCTGGGG TTTCTTCTTTGTGGC TERM 1624 2198486 - 2198511 + T 100 -15.5 -4.63048 | opp_overlap 2198486, overlap 2198482 AGCTCCTATACGAAA CCCCAGATCTC GAAA GAGGTCTGGGG TTTCTTCTTTGTGGC TERM 1625 2198638 - 2198655 + T 89 -12.7 -4.04579 | opp_overlap 2198638 CGGCATCAATAAAAA GGCCACC TGAA GGTGGCC TTTGCTGTTTCTGGG TERM 1626 2198655 - 2198638 - T 100 -12.7 -5.1356 | opp_overlap 2198638 CGGCATCAATAAAAA GGCCACC TGAA GGTGGCC TTTGCTGTTTCTGGG Pmen_1988 2200277 - 2198715 - | transposase IS66 TERM 1627 2199208 - 2199220 + g 72 -6.9 -4.20354 | overlap 2199209 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_1989 2200656 - 2200297 - | IS66 Orf2 family protein Pmen_1990 2201109 - 2200753 - | putative 6-pyruvoyl tetrahydropterin synthase Pmen_1991 2202000 - 2201164 - | hypothetical protein Pmen_1992 2203130 - 2202051 - | hypothetical protein Pmen_1993 2203279 - 2203587 + | peptidase Pmen_1994 2203587 - 2203901 + | peptidase Pmen_1995 2203901 - 2204569 + | two component transcriptional regulator TERM 1628 2205303 - 2205293 - g 72 -8.2 -4.08767 | GCCACGCCCTGAAAA CGCC CTT GGCG GTGCTGATCAGCCTG Pmen_1996 2204566 - 2205879 + | integral membrane sensor signal transduction histidine kinase Pmen_1997 2206555 - 2205959 - | NADPH-dependent FMN reductase TERM 1629 2206606 - 2206575 - R 100 -11.7 -5.00616 | gap 2, overlap 2206578 CTTCCCCCGAAAAAA GAACGCAGGCTAGGC GATA GCCT-GCCTGCGT-C GCAAGGGAAGCGCCG TERM 1630 2206604 - 2206578 - R 100 -14.5 -4.61482 | gap 1, overlap 2206575 CCCCCGAAAAAAGAA CGCAGGCTAGGC GATA GCCT-GCCTGCG TCGCAAGGGAAGCGC Pmen_1998 2208845 - 2206701 - | methyl-accepting chemotaxis sensory transducer TERM 1631 2207375 - 2207404 + g 73 -10.7 -3.72576 | gap 1, overlap 2207378 CTGCCTGTGCGGCGT TGTGCGCCA-CGTC CTG GGCGGTGGCGCTCA TTTCCTGGAAGGCGG TERM 1632 2207580 - 2207566 - G 72 -5.6 -4.37092 | overlap 2207568 AGCTTGTCGAGAAAA CGGTTG AAC CAGCCG GCCAGCTCGCCCAAC TERM 1633 2208979 - 2209002 + H 74 -5.9 -4.57073 | opp_overlap 2208978, overlap 2208980 CTTTTGACAGGATAG TCCGCGTGC GGCAGA GTACGCGGC TTTTTGCACCGGCTA Pmen_1999 2209048 - 2210367 + | Na+/H+ antiporter NhaC TERM 1634 2210424 - 2210451 + F 100 -19.2 -4.72497 | CGCTTAACTCTTCCA CGGGGCTGCCGA TAGA TCGGTAGCCCCG TTTTGTTACTGCCTG TERM 1635 2212132 - 2212086 - g 75 -11.5 -3.72576 | gap 1 GCGTCGCCGATGAAA CCCAGCGCGG-CGCCCAGACTG CACG CAGCCTGGCCGGCCTCGGTGAG CGTCTCGGGGCGCTG Pmen_2000 2210486 - 2212168 + | methyl-accepting chemotaxis sensory transducer Pmen_2001 2213072 - 2212170 - | LysR family transcriptional regulator Pmen_2002 2213191 - 2213799 + | azoreductase TERM 1636 2213843 - 2213814 - T 100 -20.9 -3.30243 | opp_overlap 2213814 2213821, overlap 2213821 ATCCAGTCGCCATAA CGAAAAAGCCCGC GAAA GCGGGCTTTTTCG TTTGCAGGGCCTACG TERM 1637 2213814 - 2213843 + T 100 -20.9 -3.53811 | opp_overlap 2213814 2213821, overlap 2213821 ATCCAGTCGCCATAA CGAAAAAGCCCGC GAAA GCGGGCTTTTTCG TTTGCAGGGCCTACG TERM 1638 2213821 - 2213836 + T 100 -11.8 -4.98531 | opp_overlap 2213814 2213821, overlap 2213814 CGCCATAACGAAAAA GCCCGC GAAA GCGGGC TTTTTCGTTTGCAGG TERM 1639 2213836 - 2213821 - T 100 -11.8 -4.93365 | opp_overlap 2213821 2213814, overlap 2213814 CGCCATAACGAAAAA GCCCGC GAAA GCGGGC TTTTTCGTTTGCAGG Pmen_2003 2215445 - 2213859 - | ABC transporter related Pmen_2004 2216355 - 2215954 - | hypothetical protein Pmen_2005 2217446 - 2216367 - | NADH:flavin oxidoreductase/NADH oxidase Pmen_2006 2217571 - 2218443 + | LysR family transcriptional regulator Pmen_2007 2219256 - 2218501 - | ABC transporter related Pmen_2008 2219924 - 2219256 - | polar amino acid ABC transporter, inner membrane subunit Pmen_2009 2220718 - 2219921 - | cystine transporter subunit TERM 1640 2220776 - 2220796 + r 71 -7.1 -4.20368 | opp_overlap 2220780, overlap 2220766 2220780 AATTTTTTATTCCGA TAAATAATT AAA AATTATTTA TTTATATTCGAATCC TERM 1641 2220780 - 2220792 + r 70 -3.5 -4.68511 | opp_overlap 2220780, overlap 2220776 TTTTATTCCGATAAA TAATT AAA AATTA TTTATTTATATTCGA Pmen_2010 2221794 - 2220790 - | D-cysteine desulfhydrase Pmen_2011 2222620 - 2221916 - | glutamine amidotransferase Pmen_2012 2223645 - 2222617 - | homoserine dehydrogenase Pmen_2013 2224087 - 2223665 - | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_2014 2224193 - 2225062 + | LysR family transcriptional regulator TERM 1642 2225037 - 2225082 + F 77 -3.3 -4.9251 | gap 3, overlap 2225043 2225067 GCTTCATCGAGTGCC TGCAGGGCGTGGGCGTGGCCCG CTGAA CGCGCGGC-CCCACGC--TGCA TTTTCATTTTTTCTT Pmen_2015 2225193 - 2225843 + | dihydropteridine reductase Pmen_2016 2226292 - 2225897 - | endoribonuclease L-PSP Pmen_2017 2226433 - 2227359 + | LysR family transcriptional regulator Pmen_2018 2228250 - 2227372 - | LysR family transcriptional regulator TERM 1643 2229368 - 2229411 + G 76 -15.1 -3.08464 | opp_overlap 2229358, overlap 2229370 TGAAACGGTGCTGCA GGCGCGCCACCAGGCGCTG CAGGCA CGGCGCCCGGCGCCGCGTC TTCGCTCGCTGCTGC TERM 1644 2229370 - 2229409 + G 73 -14.1 -3.10056 | opp_overlap 2229358, overlap 2229368 AAACGGTGCTGCAGG CGCGCCACCAGGCGCTG CAGGCA CGGCGCCCGGCGCCGCG TCTTCGCTCGCTGCT Pmen_2019 2228352 - 2229884 + | NADH dehydrogenase subunit L TERM 1645 2230855 - 2230820 - g 78 -16 -3.15861 | opp_overlap 2230839 2230852 2230854 GAGCAGTTGCAGCAA GGCTTGCGCCGGCCCC AGGC GGTGCCGGCGCAGGCG CCCGAGCTGGCACGG Pmen_2020 2229881 - 2232328 + | hypothetical protein Pmen_2021 2233226 - 2232375 - | hypothetical protein TERM 1646 2233638 - 2233674 + G 72 -13.8 -3.03338 | gap 2, overlap 2233627 GGGCAGCTCCGACTC GGCGCGGTCACCACGGCA AAA TACC-TGGTG-CCGCGCC TGTTGGGGCCGTTCT TERM 1647 2234183 - 2234195 + G 70 -6.2 -4.17089 | overlap 2234180 GAAGGCACTCTCGCC GGCC GCGCA GGCC TTTTCCAGCTTTGCC Pmen_2022 2233323 - 2234252 + | LysR family transcriptional regulator Pmen_2023 2235265 - 2234246 - | translation factor SUA5 Pmen_2024 2237182 - 2235287 - | patatin TERM 1648 2237043 - 2236988 - G 80 -17.5 -2.56596 | gap 2, overlap 2236984 CTCGCCAGCAAGGTA GCGCTGGCGACCCAGCTCAGCCGCCGC CGCC GCGGCAGCCGCGATGG--CGCCGGCGC TGGTGCCGCCGATGC TERM 1649 2237291 - 2237277 - R 78 -10 -3.91716 | opp_overlap 2237279 TCAGTCGCGAAAGAA CACCTG GAT CAGGTG ATACCCGAACTGGGT Pmen_2025 2237540 - 2237262 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1650 2237379 - 2237405 + g 80 -9.5 -4.20516 | overlap 2237379 CCGCACCATCTGGCC GG-GGCGTACCTC GCC GAGGT-CGCCGCC TTTCTTGCCTGAGGG Pmen_2026 2237688 - 2238917 + | twitching motility protein Pmen_2027 2239756 - 2238929 - | amino acid ABC transporter periplasmic protein TERM 1651 2239173 - 2239196 + g 78 -10.3 -4.07885 | gap 1, opp_overlap 2239188 CAGGCGTCGATACGC CCCCGCTCCA GCAGA TGG-GCGGGG TTTTCACCCAGCGTA Pmen_2028 2241704 - 2239749 - | acetoacetyl-CoA synthetase Pmen_2029 2242741 - 2241842 - | hydroxymethylglutaryl-CoA lyase TERM 1652 2242626 - 2242596 - G 95 -16.8 -3.83026 | opp_overlap 2242623 2242624 2242625 TTGGGCGAGACGAAA CTGCCGACCTCGAC ATA GCCGAGGCCGGCGG CGCTCAGGTCGTCGA TERM 1653 2242624 - 2242675 + g 85 -13.1 -4.1021 | gap 2, opp_overlap 2242596, overlap 2242623 2242625 CATAGCCGAGGCCGG CGG-CGCTCAG-GTCGTCGACCAGG CGCA CCTTGTCGGCGACGCTGATCGGCTG TTTCTCGTTCTGCAG TERM 1654 2242625 - 2242673 + g 83 -14.6 -3.64357 | gap 1, opp_overlap 2242596, overlap 2242623 2242624 ATAGCCGAGGCCGGC GGCGCTCAG-GTCGTCGACCAGG CGCA CCTTGTCGGCGACGCTGATCGGC TGTTTCTCGTTCTGC Pmen_2030 2244857 - 2242923 - | 3-methylcrotonoyl-CoA carboxylase, alpha subunit TERM 1655 2244566 - 2244582 + g 75 -9.3 -4.07568 | opp_overlap 2244548 CGGCTTCTTCGATGG CGCGGGC GAA GCCGGCG TTTTCCGAGAGAAAG Pmen_2031 2245654 - 2244854 - | gamma-carboxygeranoyl-CoA hydratase Pmen_2032 2247337 - 2245730 - | propionyl-CoA carboxylase TERM 1656 2246955 - 2246966 + g 73 -3.6 -4.59773 | overlap 2246950 CGGGCGATGGCCTGG GCGC GCAG GTGC TTTTTCACGGTCAGC TERM 1657 2247366 - 2247394 + r 89 -10.9 -4.25256 | ATTTCTGGCTACCGT CTGTAGGGTGCGC CGT GCGCACCATGCCG TTGTTTTGGTGCGCA Pmen_2033 2248601 - 2247438 - | isovaleryl-CoA dehydrogenase Pmen_2034 2249052 - 2248666 - | MerR family transcriptional regulator Pmen_2035 2249134 - 2249901 + | short-chain dehydrogenase/reductase SDR Pmen_2036 2249992 - 2251179 + | acetyl-CoA acetyltransferase TERM 1658 2251603 - 2251560 - g 73 -12.6 -3.36515 | opp_overlap 2251570, overlap 2251558 2251582 GCCGATCCTGAAATA CGG-CAGCGAGGCGCAGAAA CAGCGC TTTCTCCGCC-CGCTGGCCG AAGGCAGCATGCTCG Pmen_2037 2251264 - 2252391 + | acyl-CoA dehydrogenase domain-containing protein ampC 2253645 - 2252509 - | beta-lactamase Pmen_2039 2254095 - 2253658 - | AsnC family transcriptional regulator TERM 1659 2254341 - 2254369 + G 74 -10.2 -3.76482 | TGGTGGACGTGGTGT TCTGGCGCTGCC TGATC GGCGGCGCCGCA TTGTTGCTGGTCTGC Pmen_2040 2254199 - 2255125 + | hypothetical protein Pmen_2041 2256950 - 2255115 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 1660 2255778 - 2255795 + g 100 -9.8 -4.72272 | ATGGCCCTTCTGGCT GGCGCC GGTAAA GGCGCC TTTTTCGTAGCCGAA Pmen_2042 2257184 - 2258305 + | ABC transporter related Pmen_2043 2258305 - 2259402 + | ABC transporter related Pmen_2044 2259399 - 2260262 + | binding-protein-dependent transport systems inner membrane component Pmen_2045 2260271 - 2261071 + | binding-protein-dependent transport systems inner membrane component TERM 1661 2261204 - 2261230 + G 79 -13.1 -3.74361 | gap 1 CGCAAGGGTTTTCTG CCGATCACCACC ACCC GG-GGTGATCGG TTGTTCATCGGTCTG Pmen_2046 2261084 - 2261356 + | small integral membrane protein-like protein Pmen_2047 2261408 - 2263150 + | extracellular solute-binding protein TERM 1662 2263196 - 2263166 - T 95 -16.3 -3.89346 | gap 1, opp_overlap 2263153 2263169 2263172, overlap 2263169 TCGCTACGGCAGAAA CG-ACAACGGCACC CTCG GGTGCCGTTGTTCG TTGTGCAGCGCTGCT TERM 1663 2263192 - 2263169 - T 87 -16.8 -3.01918 | opp_overlap 2263153 2263169 2263172, overlap 2263166 CTACGGCAGAAACGA CAACGGCACC CTCG GGTGCCGTTG TTCGTTGTGCAGCGC TERM 1664 2263169 - 2263192 + T 100 -16.8 -3.44146 | opp_overlap 2263169 2263166, overlap 2263153 2263172 CTACGGCAGAAACGA CAACGGCACC CTCG GGTGCCGTTG TTCGTTGTGCAGCGC TERM 1665 2263172 - 2263189 + T 86 -12.7 -3.8591 | opp_overlap 2263169 2263166, overlap 2263169 2263153 CGGCAGAAACGACAA CGGCACC CTCG GGTGCCG TTGTTCGTTGTGCAG Pmen_2048 2264065 - 2263211 - | methenyltetrahydrofolate cyclohydrolase TERM 1666 2264530 - 2264562 + H 100 -14.2 -4.19238 | opp_overlap 2264536, overlap 2264536 CGTCCACCCCATATT CCAGAACGCCAGGC CCAAA GCCTGGCGTTTTTG TTTTAAGCTTCAAAC TERM 1667 2264536 - 2264556 + H 100 -14 -5.46706 | opp_overlap 2264536, overlap 2264530 CCCCATATTCCAGAA CGCCAGGC CCAAA GCCTGGCG TTTTTGTTTTAAGCT TERM 1668 2264556 - 2264536 - H 86 -14.7 -3.34962 | opp_overlap 2264536 2264530 CCCCATATTCCAGAA CGCCAGGCC CAA AGCCTGGCG TTTTTGTTTTAAGCT tig 2264792 - 2266102 + | trigger factor TERM 1669 2266255 - 2266234 - g 72 -11.5 -3.58731 | overlap 2266226 2266225 2266223 2266235 AAAACATGCCTGAAA TCCAGGCCG CTGG CGGCCTGGT GCCGATGGTCATCGA TERM 1670 2266254 - 2266235 - g 72 -15 -2.74515 | overlap 2266226 2266225 2266223 2266234 AAACATGCCTGAAAT CCAGGCCG CTGG CGGCCTGG TGCCGATGGTCATCG clpP 2266197 - 2266838 + | ATP-dependent Clp protease proteolytic subunit TERM 1671 2266852 - 2266899 + F 71 -9.2 -3.80858 | gap 1, overlap 2266887 AGATGAGGTTCCGGC TGCGGGCATTGTGCATCGGCG CGTCCGT CGCCCTTGAA-AATGCCCGCA TTTGCCTTCATCTTG TERM 1672 2267202 - 2267157 - g 70 -8.4 -3.93288 | gap 1 CGGCACCCAAGGAAA TCAGCGCGATCCTCGATCAAT ATGTG ATCGGTC-AGGAACGCGCTAA AAAGGTGCTTTCGGT clpX 2266946 - 2268226 + | ATP-dependent protease ATP-binding subunit TERM 1673 2268245 - 2268271 + F 100 -12.2 -4.4017 | opp_overlap 2268247 2268250, overlap 2268246 2268247 2268250 CTGTTACACGGTGCA AAGAAGGGGCCC TAT GGGCCCCTTCGC TTTTCTGGACATTGC TERM 1674 2268246 - 2268270 + F 85 -15.7 -3.2362 | opp_overlap 2268247 2268250, overlap 2268245 2268247 2268250 TGTTACACGGTGCAA AGAAGGGGCCC TAT GGGCCCCTTCG CTTTTCTGGACATTG TERM 1675 2268247 - 2268269 + F 88 -19.2 -2.5369 | opp_overlap 2268247 2268250, overlap 2268246 2268245 2268250 GTTACACGGTGCAAA GAAGGGGCCC TAT GGGCCCCTTC GCTTTTCTGGACATT TERM 1676 2268269 - 2268247 - f 100 -19.2 -3.56643 | opp_overlap 2268247 2268246 2268245 2268250, overlap 2268250 GTTACACGGTGCAAA GAAGGGGCCC TAT GGGCCCCTTC GCTTTTCTGGACATT TERM 1677 2268266 - 2268250 - f 93 -15.1 -3.91984 | opp_overlap 2268247 2268246 2268245 2268250, overlap 2268247 ACACGGTGCAAAGAA GGGGCCC TAT GGGCCCC TTCGCTTTTCTGGAC TERM 1678 2268250 - 2268266 + F 86 -15.1 -3.41587 | opp_overlap 2268250 2268247, overlap 2268247 2268246 2268245 ACACGGTGCAAAGAA GGGGCCC TAT GGGCCCC TTCGCTTTTCTGGAC Pmen_2052 2268376 - 2270772 + | ATP-dependent protease La Pmen_2053 2270908 - 2271180 + | nucleoid protein HU beta subunit TERM 1679 2271308 - 2271289 - f 81 -13.6 -3.40899 | opp_overlap 2271289 AACGCGTTACGAGAA GGCGCATC CAAG GATGCGCC TTTCTTCTATCTGGA TERM 1680 2271289 - 2271308 + F 100 -13.6 -4.42974 | opp_overlap 2271289 AACGCGTTACGAGAA GGCGCATC CAAG GATGCGCC TTTCTTCTATCTGGA TERM 1681 2272375 - 2272416 + G 73 -10.7 -3.6502 | gap 1, opp_overlap 2272385, overlap 2272375 GAGGAGGCGCTCTAT G-CGCTGCAAACGGGCCAGG TTT CCGAGCCCGTACGCAGCGAC TTTGGCTGGCACCTG Pmen_2054 2271376 - 2273223 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1682 2273240 - 2273268 + T 95 -13.2 -4.12188 | opp_overlap 2273245, overlap 2273245 CGTCGTTCGCTGCGA AAAAAGCCCCGC CTGGT GCGGGGCTTTTC TTTTGCGGGTCATAA TERM 1683 2273245 - 2273263 + T 100 -13.1 -5.08255 | opp_overlap 2273245, overlap 2273240 TTCGCTGCGAAAAAA GCCCCGC CTGGT GCGGGGC TTTTCTTTTGCGGGT TERM 1684 2273263 - 2273245 - T 100 -13.1 -5.00616 | opp_overlap 2273240 2273245 TTCGCTGCGAAAAAA GCCCCGC CTGGT GCGGGGC TTTTCTTTTGCGGGT Pmen_2055 2274825 - 2273278 - | phospholipase D/transphosphatidylase TERM 1685 2274202 - 2274246 + g 72 -12.9 -3.15427 | opp_overlap 2274204, overlap 2274204 CGGGCCGATGGCCAG AACGTCGAGGTCGGCGAAG AGCACGC CTTCGCTGGCCTCGAAGTA TTCGTCGCCGATATT TERM 1686 2274204 - 2274244 + g 78 -15.5 -3.1372 | opp_overlap 2274204, overlap 2274202 GGCCGATGGCCAGAA CGTCGAGGTCGGCGAAG AGCACGC CTTCGCTGGCCTCGAAG TATTCGTCGCCGATA TERM 1687 2274981 - 2274924 - R 100 -20.2 -3.89614 | gap 3, opp_overlap 2274936 2274939, overlap 2274925 2274933 2274936 TTGAATGCTGACAAA CGCCAGAAACG-ACAACGCCGCAC-TTGC TGG GCAATGTGCGGCGTTGTGCGTT-CAGGCA CGGCTGGCCGTGCAT TERM 1688 2274980 - 2274925 - R 100 -21.5 -2.93447 | gap 3, opp_overlap 2274936 2274939, overlap 2274924 2274933 2274936 TGAATGCTGACAAAC GCCAGAAACG-ACAACGCCGCAC-TTGC TGG GCAATGTGCGGCGTTGTGCGTT-CAGGC ACGGCTGGCCGTGCA TERM 1689 2274973 - 2274933 - R 100 -20 -3.96291 | gap 2, opp_overlap 2274936 2274939, overlap 2274925 2274924 2274936 GACAAACGCCAGAAA CG-ACAACGCCGCAC-TTGC TGG GCAATGTGCGGCGTTGTGCG TTCAGGCACGGCTGG TERM 1690 2274936 - 2274969 + r 95 -20.5 -2.52464 | gap 1, opp_overlap 2274933 2274925 2274924 2274936, overlap 2274939 AAACGCCAGAAACGA CAACGCCGCAC-TTGC TGG GCAATGTGCGGCGTTG TGCGTTCAGGCACGG TERM 1691 2274969 - 2274936 - R 95 -20.5 -3.03034 | gap 1, opp_overlap 2274936 2274939, overlap 2274933 2274925 2274924 AAACGCCAGAAACGA CAACGCCGCAC-TTGC TGG GCAATGTGCGGCGTTG TGCGTTCAGGCACGG TERM 1692 2274939 - 2274966 + r 93 -16.4 -3.41878 | gap 1, opp_overlap 2274936 2274933 2274925 2274924, overlap 2274936 CGCCAGAAACGACAA CGCCGCAC-TTGC TGG GCAATGTGCGGCG TTGTGCGTTCAGGCA Pmen_2056 2275838 - 2275044 - | enoyl-[acyl-carrier-protein] reductase [NADH] Pmen_2057 2277480 - 2275867 - | ABC transporter related Pmen_2058 2278501 - 2277482 - | binding-protein-dependent transport systems inner membrane component Pmen_2059 2279577 - 2278504 - | binding-protein-dependent transport systems inner membrane component Pmen_2060 2281426 - 2279579 - | extracellular solute-binding protein TERM 1693 2281069 - 2281040 - G 72 -11.5 -3.57144 | gap 1, opp_overlap 2281033 2281054, overlap 2281066 CTCGCCATCGTGAAA GCGCGCTTCCTTGC GCA GCA-GGAAACGCAC CCAGGCGTTGTCCGG Pmen_2061 2283273 - 2281423 - | extracellular solute-binding protein Pmen_2062 2283400 - 2284842 + | putative signal transduction protein Pmen_2063 2286339 - 2284843 - | lytic transglycosylase, catalytic TERM 1694 2285728 - 2285743 + g 72 -4.6 -4.45664 | overlap 2285739 CAGGTTCCAGTAGTC GCTGGG CAGG CCGAGC TTTTCGTTGCGTTCG Pmen_2064 2287363 - 2286590 - | hydroxyacylglutathione hydrolase TERM 1695 2288053 - 2288065 + G 85 -10.5 -4.21908 | GGAGGCCTGGCAACT GCCGG GGG CCGGC TTTTACCTGCTGGTA Pmen_2065 2287436 - 2288194 + | hypothetical protein rnhA 2288235 - 2288687 + | ribonuclease H TERM 1696 2289112 - 2289081 - g 77 -12.2 -3.71848 | CGGCTTCATCAACAA CGAGTTCGCCCTGC TGGG GCAGAGCGAGCGCG CCGATGTCAGCGACT Pmen_2067 2288761 - 2289519 + | DNA polymerase III subunit epsilon Pmen_2068 2289642 - 2291885 + | lysine decarboxylase Pmen_2069 2292088 - 2292900 + | enoyl-CoA hydratase TERM 1697 2294424 - 2294398 - g 70 -13.6 -3.01712 | opp_overlap 2294417 GTGGTTCCTCGAACA GCGCCGGGCAGC CAT GCTGGTCGGCGC CTGCGCCGACTATAT Pmen_2070 2292947 - 2294626 + | hypothetical protein TERM 1698 2294656 - 2294675 + G 71 -15 -2.55351 | overlap 2294655 2294666 GCCTTTCTCGACCCG GCCCAGCC GGGC GGCTGGGC GTTGCTCTACCACCA nudC 2294626 - 2295447 + | NADH pyrophosphatase Pmen_2072 2296340 - 2295495 - | hypothetical protein Pmen_2073 2296376 - 2297023 + | hypothetical protein TERM 1699 2297191 - 2297177 - T 70 -3.4 -4.67641 | overlap 2297185 ACCTCAAAATGAAAA CCACTG AAC CTGCGG TGCGCATCGCGTACC TERM 1700 2297203 - 2297251 + T 100 -21.9 -3.75153 | opp_overlap 2297185 2297212 2297219, overlap 2297219 GCGGTGCGCATCGCG TACCCAAAACGACAAAGGCACCT TGT AGGTGCCTTTGTCGTTCGGGGCA TTTGGCTTCAGGAGA TERM 1701 2297242 - 2297212 - T 100 -22.8 -4.18197 | opp_overlap 2297203 2297219, overlap 2297219 ATCGCGTACCCAAAA CGACAAAGGCACCT TGT AGGTGCCTTTGTCG TTCGGGGCATTTGGC TERM 1702 2297235 - 2297219 - T 95 -12.3 -4.21402 | opp_overlap 2297203 2297219, overlap 2297212 ACCCAAAACGACAAA GGCACCT TGT AGGTGCC TTTGTCGTTCGGGGC TERM 1703 2297219 - 2297235 + T 89 -12.3 -4.05446 | opp_overlap 2297219 2297212, overlap 2297203 ACCCAAAACGACAAA GGCACCT TGT AGGTGCC TTTGTCGTTCGGGGC Pmen_2074 2298026 - 2297259 - | short chain dehydrogenase Pmen_2075 2299110 - 2298043 - | aminoglycoside phosphotransferase Pmen_2076 2300367 - 2299378 - | alpha-L-glutamate ligase-like protein TERM 1704 2300095 - 2300113 + g 84 -17.4 -3.14564 | opp_overlap 2300066, overlap 2300090 CAGGATGCCGTCACC GCCGGCGC CCT GCGCCGGC TTGATGACGAAGTCG Pmen_2077 2301898 - 2300372 - | hypothetical protein Pmen_2078 2302440 - 2301904 - | hypothetical protein Pmen_2079 2302744 - 2303466 + | GntR family transcriptional regulator prpB 2303463 - 2304350 + | 2-methylisocitrate lyase Pmen_2081 2304387 - 2305601 + | methylcitrate synthase TERM 1705 2306923 - 2306907 - g 70 -3.6 -4.56597 | overlap 2306916 CCTGCTGGCGAAAAA GGCCAA CGAGC TGGGCC TGGTACGCAAGCCCT Pmen_2082 2305603 - 2308224 + | aconitate hydratase TERM 1706 2308373 - 2308427 + F 84 -17.3 -2.71731 | gap 1, opp_overlap 2308367 GGAGACAAGCGTGTA GCCCGGATGAAATCCGGGGCAAGGTT GAAT GATTCT-CCCCGGATTGCATCCGGGC TACTTCAGGACTGCA TERM 1707 2308906 - 2308876 - g 70 -3.9 -4.4727 | CCAATATCCAGAAAA CCATCATCGCCCA TGTGC CGGTCATTGATGG CCAGGTGCAGGAAAC Pmen_2083 2308401 - 2309633 + | methylitaconate delta2-delta3-isomerase TERM 1708 2309643 - 2309674 + T 95 -16 -3.88787 | opp_overlap 2309645 2309650, overlap 2309650 TTCTAGGCCCTGAAT GAGAAAAGGCTCGA AGTA TCGAGCCTTTTCCC TTTGTAAACATGTGC TERM 1709 2309672 - 2309645 - T 84 -17.2 -2.71364 | opp_overlap 2309643 2309650, overlap 2309650 CTAGGCCCTGAATGA GAAAAGGCTCGA AGTA TCGAGCCTTTTC CCTTTGTAAACATGT TERM 1710 2309650 - 2309667 + T 93 -11.3 -4.39571 | opp_overlap 2309645 2309650, overlap 2309643 CCCTGAATGAGAAAA GGCTCGA AGTA TCGAGCC TTTTCCCTTTGTAAA TERM 1711 2309667 - 2309650 - T 95 -11.3 -4.5442 | opp_overlap 2309650 2309643, overlap 2309645 CCCTGAATGAGAAAA GGCTCGA AGTA TCGAGCC TTTTCCCTTTGTAAA Pmen_2084 2310517 - 2309699 - | hypothetical protein TERM 1712 2310574 - 2310596 + H 73 -9 -3.89957 | overlap 2310575 ATAGGCCGCGTTTTT CGCCGGGCCC ATG GGGTTCGGCA TTGTTACTTATTCAA TERM 1713 2310575 - 2310595 + H 70 -12.5 -2.93251 | overlap 2310574 TAGGCCGCGTTTTTC GCCGGGCCC ATG GGGTTCGGC ATTGTTACTTATTCA Pmen_2085 2310698 - 2313070 + | phosphoenolpyruvate synthase TERM 1714 2313094 - 2313112 + F 100 -13.1 -4.72272 | opp_overlap 2313057 2313094, overlap 2313062 CATCGATGTGCACAA GGGCGGG TTGAT CCCGCCC TTTTTAGTGCCCCGG TERM 1715 2313112 - 2313094 - f 76 -13.1 -3.31461 | opp_overlap 2313062 2313094, overlap 2313057 CATCGATGTGCACAA GGGCGGG TTGAT CCCGCCC TTTTTAGTGCCCCGG Pmen_2086 2313258 - 2314247 + | hypothetical protein Pmen_2087 2314499 - 2314987 + | ribonuclease activity regulator protein RraA TERM 1716 2315565 - 2315592 + G 72 -8.2 -4.03234 | CCTGATGCTCCAGTT GCGCCGCCGGGC GGCT GCGCTGCGTCGC TTTCTGTCGCCGCAA Pmen_2088 2314993 - 2315979 + | Mg2+ transporter protein, CorA family protein Pmen_2089 2316035 - 2316280 + | hypothetical protein Pmen_2090 2316282 - 2317106 + | TM helix repeat-containing protein TERM 1717 2317130 - 2317158 + F 100 -16 -4.30576 | overlap 2317131 TGTTATTTTATGCAG CTGCCCGGCAGG CATGA CCTGCCGGGCAC TTTTCGTCCTGACCG TERM 1718 2317131 - 2317157 + F 91 -19.5 -3.18024 | overlap 2317130 GTTATTTTATGCAGC TGCCCGGCAGG CATGA CCTGCCGGGCA CTTTTCGTCCTGACC Pmen_2091 2317189 - 2317779 + | RNA polymerase sigma factor SigX TERM 1719 2317912 - 2317902 - g 95 -4.6 -5.40004 | GATGAAAGTAAAAAA CACC TTG GGCG TAGTCATTGGCTCTC TERM 1720 2318498 - 2318442 - g 90 -18.6 -3.14132 | gap 1, opp_overlap 2318442 CGGTGGCGGCAGCAA GCCGGCCCCGGCTCCGGCTCCTGTAGC TGCA GCTCC-GGAGCCGATGCCTGAGCCTGC TCCTGAGCCGGCCAT Pmen_2092 2317888 - 2318871 + | OmpF family protein TERM 1721 2318890 - 2318917 + T 100 -16.4 -4.87665 | opp_overlap 2318896, overlap 2318896 TTCTGGTGCTGTAAG GAGAAACCCGGC CGAG GCCGGGTTTTTC TTTTTCTGCATAAAA TERM 1722 2318896 - 2318911 + T 100 -11.8 -5.69262 | opp_overlap 2318896, overlap 2318890 TGCTGTAAGGAGAAA CCCGGC CGAG GCCGGG TTTTTCTTTTTCTGC TERM 1723 2318911 - 2318896 - T 84 -11.8 -4.05446 | opp_overlap 2318890 2318896 TGCTGTAAGGAGAAA CCCGGC CGAG GCCGGG TTTTTCTTTTTCTGC TERM 1724 2318956 - 2318935 - T 100 -10.8 -5.24129 | TTTCTGCATAAAAAA GCCCGCCA AGGGGA CGGCGGGC AAACAACGCCTTCGC Pmen_2093 2319729 - 2318986 - | uroporphyrin-III C-methyltransferase TERM 1725 2319741 - 2319799 + r 100 -29.1 -2.69471 | overlap 2319742 2319743 TCATATCGGGTTCCT CGTAGGGTGCGCCGTGCGCACCG AGTTATTTTGCAG CGGTGCGCACAGCGCACCCTACG CTTGTGTCGCCATCG TERM 1726 2319742 - 2319800 + r 90 -14.8 -3.49475 | gap 2, overlap 2319741 2319743 CATATCGGGTTCCTC G--TAGGGTGCGCCGTGCGCACCG AGTTATTTTGCAG CGGTGCGCACAGCGCACCCTACGC TTGTGTCGCCATCGG Pmen_2094 2322512 - 2319795 - | assimilatory nitrate reductase (NADH) alpha subunit apoprotein TERM 1727 2322215 - 2322198 - G 75 -4.8 -4.60797 | gap 1, overlap 2322200 GCCGGAGATATAAAA GGCCACG CTGTC CG-GGCC GTGCTCGCGGATGGT Pmen_2095 2322948 - 2322622 - | assimilatory nitrite reductase (NAD(P)H) small subunit Pmen_2096 2325401 - 2322945 - | assimilatory nitrite reductase (NAD(P)H) large subunit precursor TERM 1728 2325476 - 2325446 - R 100 -17.7 -5.88476 | gap 1, opp_overlap 2325446 AAAAGAAACAAAAAA GGCGTCC-CGCTAG TCAC CTAGCGAGGACGCC TTTGTCCAGGTCCCG TERM 1729 2325446 - 2325476 + r 100 -17.7 -3.87815 | gap 1, opp_overlap 2325446 AAAAGAAACAAAAAA GGCGTCC-CGCTAG TCAC CTAGCGAGGACGCC TTTGTCCAGGTCCCG TERM 1730 2325504 - 2325531 + r 71 -5.5 -4.29493 | CCGTTCTATCGGGAA GTGCAGCCTTC TTCGTT GAAGGTCGCGC TTTATGTGTTTGCTG Pmen_2097 2327345 - 2325681 - | protein kinase Pmen_2098 2328667 - 2327456 - | nitrite transporter TERM 1731 2328747 - 2328692 - R 88 -19.1 -2.85216 | gap 3, opp_overlap 2328722 2328740 CATCAGCGAGAAGGA GCCCGGCATGGCGCGGCGAACCGTGGTC GTG GAC-ACGGCG-GCCGCGCC-TGCCGGGG AGGCCGTGCACTTGT TERM 1732 2328870 - 2328914 + r 73 -9.3 -3.96148 | gap 2, opp_overlap 2328872, overlap 2328872 GCGAACACGAAAAAA AACGCCGCTTCACCGCAGGCC ATGAA GGCC-G-GGTGAGGCGACGTC TTTGTCGTGAGGGAG TERM 1733 2328912 - 2328872 - R 100 -11.9 -5.94597 | gap 2, opp_overlap 2328872 2328870 GAACACGAAAAAAAA CGCCGCTTCACCGCAGGCC ATGAA GGCC-G-GGTGAGGCGACG TCTTTGTCGTGAGGG TERM 1734 2328872 - 2328912 + r 77 -11.9 -3.57406 | gap 2, opp_overlap 2328872, overlap 2328870 GAACACGAAAAAAAA CGCCGCTTCACCGCAGGCC ATGAA GGCC-G-GGTGAGGCGACG TCTTTGTCGTGAGGG Pmen_2099 2329245 - 2329090 - | hypothetical protein Pmen_2100 2329829 - 2329386 - | thioesterase-like protein Pmen_2101 2331752 - 2329908 - | sulfatase Pmen_2102 2332515 - 2331826 - | hypothetical protein Pmen_2103 2333417 - 2332626 - | nitrate ABC transporter, ATPase subunits C and D TERM 1735 2333463 - 2333488 + r 78 -2.5 -5.10933 | gap 1, overlap 2333465 2333467 GGGGAGTCGTGTCAG GCTTTCCCGCAT TTA ATTCGGGAT-GC TTTTCTTTTAAATCA Pmen_2104 2334386 - 2333535 - | nitrate ABC transporter, inner membrane subunit Pmen_2105 2335682 - 2334399 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 1736 2335168 - 2335178 + g 76 -8.2 -4.18934 | overlap 2335166 TGGGCGAAGGTCAGC GGCG TGC CGCC TTTCTTCACGTGCTC TERM 1737 2335641 - 2335659 + g 70 -10.2 -3.65046 | CTTGAGGAAGTTGCG GCGGCTGG TGT CCAGCGGC TTGTTCGAATCACGA TERM 1738 2335716 - 2335767 + r 93 -17.3 -3.38272 | opp_overlap 2335716 GCGCATAAACAAAAA CGGCGTACGCCAGGCCACCTC AAATGAGAGG GAGGTGACCTGACGGACGCCG TTGTCCGTGATCCTC TERM 1739 2335767 - 2335716 - R 100 -21.7 -5.38054 | opp_overlap 2335716 GCGCATAAACAAAAA CGGCGTACGCCAGGCCACCTC AAATGAGAGG GAGGTGACCTGACGGACGCCG TTGTCCGTGATCCTC TERM 1740 2335910 - 2335924 + r 85 -5.6 -5.14563 | opp_overlap 2335907, overlap 2335907 AGCTGGATATAAGCT GGCCAG AAG CTAGCC TTTTTTAATCAAGAA TERM 1741 2335971 - 2336007 + r 91 -13.7 -3.86346 | GAGGTCGTTTGGCAA CGTGCGCGGCGAGCC AGCGCGC GGCTCGCCCTGCATG TTTCTGAGCCAATGC Pmen_2106 2336384 - 2336070 - | hypothetical protein TERM 1742 2336460 - 2336441 - H 72 -2.2 -4.74504 | AGCCTAATCTAAAAA TACTGT ACAAATAA ACAGTA TTGAGGAATAGTAAG Pmen_2107 2336532 - 2336924 + | hypothetical protein TERM 1743 2336972 - 2336998 + T 89 -10.7 -4.66057 | opp_overlap 2336972, overlap 2336967 CGCGCAAAGAAAAAA GCGCCGCGACC TCAAC GGAAGCGGCGC TTTTCATTTATGTGT TERM 1744 2336998 - 2336972 - T 100 -10.7 -5.63517 | opp_overlap 2336967 2336972 CGCGCAAAGAAAAAA GCGCCGCGACC TCAAC GGAAGCGGCGC TTTTCATTTATGTGT Pmen_2108 2337713 - 2337024 - | enoyl-CoA hydratase Pmen_2109 2337900 - 2338118 + | hypothetical protein TERM 1745 2338156 - 2338142 - T 100 -2.8 -5.75945 | ATCCTTTAAAAAAAA TTTGCC ATC GGGAAA ACATTCGACTAAATT TERM 1746 2338319 - 2338346 + T 100 -12.8 -5.0925 | opp_overlap 2338319 TTCGCAATACCTAAA GCCCTGAAAGCT GAGA AGTTTTCGGGGC TTTTTGCTTTTCAGC Pmen_2110 2339364 - 2338357 - | phage integrase family protein Pmen_2111 2340641 - 2339364 - | hypothetical protein Pmen_2112 2341985 - 2340795 - | zonular occludens toxin Pmen_2113 2342302 - 2341985 - | hypothetical protein Pmen_2114 2343620 - 2342304 - | hypothetical protein TERM 1747 2343587 - 2343569 - G 86 -6.6 -5.07652 | overlap 2343570 GCGTTGAAAAGAAAA GCGCTGCC ATC AGCAGCGA GGCCTGCGCGATATA TERM 1748 2343586 - 2343570 - G 70 -10.1 -3.63868 | overlap 2343569 CGTTGAAAAGAAAAG CGCTGCC ATC AGCAGCG AGGCCTGCGCGATAT TERM 1749 2343736 - 2343715 - R 95 -10.9 -4.62069 | opp_overlap 2343712 2343715 CCCTTATGTGAAAAA GCCCGATAA CGAG TTACCGGGC TGGTTGGTTGCAGCC TERM 1750 2343861 - 2343890 + r 77 -11.3 -3.67597 | ATCAGAGAGGGCAGT GGTCACGCCGGCC GGGA GGGCGGCGTGGGC TTGTTGCATGGCCAG Pmen_2115 2344177 - 2343974 - | hypothetical protein Pmen_2116 2344366 - 2344187 - | hypothetical protein Pmen_2117 2344750 - 2344382 - | hypothetical protein TERM 1751 2344492 - 2344508 + g 74 -10.1 -3.78934 | CGGCTTCGATGTGCA GGGCGAG ATT CTTGCCC TTGTTCTGGCCGCCG Pmen_2119 2345286 - 2344999 - | hypothetical protein Pmen_2120 2345581 - 2345291 - | hypothetical protein Pmen_2121 2345836 - 2345621 - | hypothetical protein Pmen_2122 2345967 - 2346236 + | hypothetical protein Pmen_2123 2346304 - 2347131 + | hypothetical protein Pmen_2124 2347179 - 2347838 + | hypothetical protein Pmen_2125 2347893 - 2348642 + | hypothetical protein Pmen_2126 2350131 - 2349802 - | plasmid stabilization system protein Pmen_2127 2350364 - 2350128 - | CopG/Arc/MetJ family transcriptional regulator TERM 1752 2350570 - 2350609 + H 100 -18 -3.61889 | opp_overlap 2350576, overlap 2350576 GCCACTTTCGCAATG CATGAAGCCCCGAGAGCT GAAA AGTTCTCGGGGCTTTTTG TTTGCCGCCTTTTTG TERM 1753 2350576 - 2350603 + H 100 -17.8 -5.27335 | opp_overlap 2350576, overlap 2350570 TTCGCAATGCATGAA GCCCCGAGAGCT GAAA AGTTCTCGGGGC TTTTTGTTTGCCGCC TERM 1754 2350603 - 2350576 - H 85 -15.6 -3.21912 | opp_overlap 2350576 2350570 TTCGCAATGCATGAA GCCCCGAGAGCT GAAA AGTTCTCGGGGC TTTTTGTTTGCCGCC Pmen_2128 2350810 - 2351016 + | hypothetical protein TERM 1755 2351056 - 2351072 + F 100 -15.1 -5.24796 | CCAGCGCTCCCCTTG GCCCGCC TCT GGCGGGC TTTTTCTTGTCTGCC TERM 1756 2351591 - 2351606 + G 75 -11.8 -3.73775 | TGAGGCCGAGCTGCT GGCGCG GCGG CGCGCC TTTCATGCCGATGCG Pmen_2129 2351124 - 2352266 + | hypothetical protein Pmen_2130 2352301 - 2352873 + | translation initiation factor 5A (eIF-5A) TERM 1757 2352886 - 2352917 + T 80 -15.3 -3.09273 | opp_overlap 2352893, overlap 2352893 TGAGCTTGAACGCTA CGAAAAACCCGGC CTTCGC GCCGGGTTTTTTG TGTCTGTTACCAGGC TERM 1758 2352910 - 2352893 - T 100 -9.8 -4.74801 | opp_overlap 2352886 2352893 GAACGCTACGAAAAA CCCGGC CTTCGC GCCGGG TTTTTTGTGTCTGTT TERM 1759 2352893 - 2352910 + T 100 -9.8 -5.46276 | opp_overlap 2352893, overlap 2352886 GAACGCTACGAAAAA CCCGGC CTTCGC GCCGGG TTTTTTGTGTCTGTT Pmen_2131 2353957 - 2352962 - | LysR family transcriptional regulator Pmen_2132 2354026 - 2354790 + | hypothetical protein Pmen_2133 2355639 - 2354785 - | LysR family transcriptional regulator Pmen_2134 2355737 - 2355961 + | hypothetical protein Pmen_2135 2355985 - 2356929 + | hypothetical protein Pmen_2136 2356929 - 2357402 + | hypothetical protein Pmen_2137 2357417 - 2358610 + | hypothetical protein Pmen_2138 2358996 - 2358607 - | hypothetical protein TERM 1760 2359029 - 2359011 - R 93 -16 -3.60865 | opp_overlap 2359025 2359027, overlap 2359005 TATCGCAAACGAGAA GGGGCTGC GTT GCAGCCCC TCGGGAGGGTCTTAC Pmen_2139 2359796 - 2359041 - | peptidase M48, Ste24p Pmen_2140 2361342 - 2359957 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase TERM 1761 2361255 - 2361278 + g 83 -13.2 -3.89346 | gap 1 GGTATTCGGGCTGCT GCTGGATGGGC TTG GCCC-TCCAGC TTTCTGGGCTCCAGG Pmen_2141 2362354 - 2361422 - | bile acid:sodium symporter Pmen_2142 2363685 - 2362357 - | flavin-containing monooxygenase TERM 1762 2364045 - 2364060 + G 72 -11.8 -3.52906 | overlap 2364044 GCCCTGTGCCACGAC GCGCCG GAAA CGGCGC TGTTTCTCGGCCTGG Pmen_2143 2363823 - 2364602 + | spermidine synthase-like protein TERM 1763 2366125 - 2366096 - g 77 -12.2 -3.71848 | gap 1 TGCCCGTATCAAGAA GCTGACCAGCAGC CTGGC GCCGCTGGTC-GC GGACGCCGAAGCCAG Pmen_2144 2364939 - 2366621 + | DEAD/DEAH box helicase domain-containing protein TERM 1764 2366685 - 2366660 - T 100 -21.9 -4.30576 | opp_overlap 2366660 GCTGGATCAGCAAAA CGCCGCGCCCT GCAC AGGGCGCGGCG TTTTTGTTTGTGCGC TERM 1765 2366660 - 2366685 + T 100 -21.9 -5.38054 | opp_overlap 2366660 GCTGGATCAGCAAAA CGCCGCGCCCT GCAC AGGGCGCGGCG TTTTTGTTTGTGCGC Pmen_2145 2367109 - 2366708 - | hypothetical protein TERM 1766 2367229 - 2367197 - R 88 -14.2 -3.64822 | opp_overlap 2367198 2367203, overlap 2367198 2367203 AGCGGTCCATGCAAA GCAAAACGCCCCGA ACCAG TCGGGGCGTTTCGT TCGCTTCTGCCCGCG TERM 1767 2367228 - 2367198 - R 86 -17.7 -2.78679 | opp_overlap 2367198 2367203, overlap 2367197 2367203 GCGGTCCATGCAAAG CAAAACGCCCCGA ACCAG TCGGGGCGTTTCG TTCGCTTCTGCCCGC TERM 1768 2367198 - 2367228 + r 85 -15.5 -3.23274 | opp_overlap 2367197 2367198 2367203, overlap 2367203 GCGGTCCATGCAAAG CAAAACGCCCCGA ACCAG TCGGGGCGTTTCG TTCGCTTCTGCCCGC TERM 1769 2367223 - 2367203 - R 100 -14 -4.56914 | opp_overlap 2367203 2367198, overlap 2367198 2367197 CCATGCAAAGCAAAA CGCCCCGA ACCAG TCGGGGCG TTTCGTTCGCTTCTG TERM 1770 2367203 - 2367223 + r 91 -14 -3.97057 | opp_overlap 2367198 2367197 2367203, overlap 2367198 CCATGCAAAGCAAAA CGCCCCGA ACCAG TCGGGGCG TTTCGTTCGCTTCTG Pmen_2146 2367746 - 2367249 - | hypothetical protein Pmen_2147 2369388 - 2367730 - | sulfite reductase (ferredoxin) TERM 1771 2368342 - 2368396 + g 71 -9.2 -3.78934 | overlap 2368387 CTTGTCGGTGACGTC GCCCGGC-GCCACGCCGGTGGGCTTG AGCGA CAGGGTCA-CGGCGACGTAGCCGGGC TTCTTGTGGGCGAAG Pmen_2148 2369581 - 2369736 + | hypothetical protein TERM 1772 2369756 - 2369780 + F 100 -11.4 -4.84529 | gap 1 CGACGCGCTTGCAGA GGCCGACCCGT CTTG GCGGG-CGGCC TTTTTGCGTTTATGC TERM 1773 2370636 - 2370648 + G 73 -9.1 -3.9941 | GGCGTATCGAGGTGC TGGCC AGC GGCCA TTTCATTCTCGGGGG Pmen_2149 2369792 - 2370892 + | periplasmic binding protein/LacI transcriptional regulator Pmen_2150 2371120 - 2370893 - | hypothetical protein TERM 1774 2371939 - 2371913 - g 100 -19.4 -3.28791 | AGCGCGTGCCCACAA GACGCCGCCACG GGC CGAGGCGGCGTC CGCCACCTATCAGGC TERM 1775 2374170 - 2374189 + G 73 -3.5 -4.67353 | overlap 2374177 GATCTGGTGCGCCAC CTGCAGC GCGCTG GGTGCAG TTTTTCGATCGATGA Pmen_2151 2371275 - 2374493 + | diguanylate cyclase/phosphodiesterase Pmen_2152 2374539 - 2375366 + | AraC family transcriptional regulator Pmen_2153 2375389 - 2376816 + | FAD dependent oxidoreductase Pmen_2154 2378737 - 2376854 - | methyl-accepting chemotaxis sensory transducer TERM 1776 2378275 - 2378249 - G 77 -10.8 -3.86822 | overlap 2378250 GAAGGCGCCGAGAAA CTGGCCCGCATC GCT GATTCGGGCCAC GGCGGAGATGAGAAT TERM 1777 2378274 - 2378250 - G 71 -14.3 -2.91772 | overlap 2378249 AAGGCGCCGAGAAAC TGGCCCGCATC GCT GATTCGGGCCA CGGCGGAGATGAGAA Pmen_2155 2379916 - 2378876 - | radical SAM domain-containing protein TERM 1778 2379510 - 2379558 + g 75 -9.3 -4.12188 | opp_overlap 2379497, overlap 2379529 AAGCGCCGGCCCAGC GCGACCTGGGCCACCATCTCGGC GCT GCTGAGCTGGCGCAGCAGGCCGC TTTTGCCGGTCATGC Pmen_2156 2380957 - 2379932 - | hypothetical protein Pmen_2157 2381096 - 2381389 + | hypothetical protein TERM 1779 2381457 - 2381438 - T 76 -10 -3.8297 | gap 1 AAGAAAAAGGCTAAA CCCTGACCG CCG CGG-CAGGG TCACAACTGATGAAT TERM 1780 2381602 - 2381634 + T 100 -23.5 -3.05384 | GCACGCGCAGTCAGG CCTTGCCCCGCTGCC AAC GGCAGCAGGGCAAGG TTCGCTCAGAGGCGG Pmen_2158 2381972 - 2381640 - | DNA-binding transcriptional activator OsmE metH 2385808 - 2382098 - | B12-dependent methionine synthase Pmen_2160 2385961 - 2388237 + | fatty acid cistrans isomerase Pmen_2161 2388353 - 2388937 + | HesB/YadR/YfhF-family protein TERM 1781 2388952 - 2388984 + T 100 -24.3 -3.92075 | opp_overlap 2388958 2388959, overlap 2388959 AGGTGCTCTGCACGA CGACAAGGGCGACCC GGT GGGTCGCCTTTGTCG TTTCTGGCTACCAAT TERM 1782 2388978 - 2388958 - T 79 -12.5 -3.44051 | opp_overlap 2388952 2388959, overlap 2388959 TCTGCACGACGACAA GGGCGACCC GGT GGGTCGCCT TTGTCGTTTCTGGCT TERM 1783 2388959 - 2388977 + T 100 -16 -4.17701 | opp_overlap 2388959 2388958, overlap 2388952 CTGCACGACGACAAG GGCGACCC GGT GGGTCGCC TTTGTCGTTTCTGGC TERM 1784 2388977 - 2388959 - T 78 -16 -2.66216 | opp_overlap 2388952 2388959, overlap 2388958 CTGCACGACGACAAG GGCGACCC GGT GGGTCGCC TTTGTCGTTTCTGGC Pmen_2162 2389501 - 2388992 - | HPP family protein+B94 Pmen_2163 2389731 - 2389495 - | hypothetical protein TERM 1785 2389748 - 2389795 + r 78 -9.9 -3.86897 | overlap 2389750 CAGGTTCTCCTGGCG TGCCTGGCCG-AAGCGCTGCAGG TAGT CCTGCGG-GCTGATGGCCAGGTG TTTGTGAAAGCTGCG Pmen_2164 2390746 - 2389724 - | transcriptional regulator TERM 1786 2389750 - 2389793 + g 74 -12.5 -3.5241 | overlap 2389748 GGTTCTCCTGGCGTG CCTGGCCG-AAGCGCTGCAGG TAGT CCTGCGG-GCTGATGGCCAGG TGTTTGTGAAAGCTG Pmen_2165 2391133 - 2390864 - | hypothetical protein Pmen_2166 2392520 - 2391315 - | hypothetical protein TERM 1787 2392045 - 2392059 + g 75 -2.7 -4.78764 | overlap 2392046 ACGAAATCCTGATCG CCCGC ATGCA GCGGA TTTTTCATCAGTTTC Pmen_2167 2394430 - 2392556 - | hypothetical protein Pmen_2168 2395755 - 2394454 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1788 2394822 - 2394838 + g 79 -2.9 -5.08601 | opp_overlap 2394823, overlap 2394823 GGTGCTCATCTGCAA ACAGCTG GAA CAGTTGC TTTTTGTTGGCGTCA TERM 1789 2395166 - 2395177 + g 87 -7.2 -5.06414 | opp_overlap 2395166 2395165 AGCACATCGAGCAAG CGGG CCGG CCCG TTTTTGTTACGCACG Pmen_2169 2396085 - 2397320 + | sigma-54 dependent trancsriptional regulator Pmen_2170 2397391 - 2397858 + | hypothetical protein Pmen_2171 2398377 - 2397826 - | ATPase/kinase involved in NAD metabolism-like protein TERM 1790 2398014 - 2397976 - G 75 -11.7 -3.73402 | opp_overlap 2397975 ACAGGCCTGATGAAA GGCCAGGCGCT-CCTGCAG TTG CGGCTGGCAGCGC-TGGCC ATCTTCCACCCAGGG Pmen_2172 2398943 - 2398374 - | nicotinamide mononucleotide transporter PnuC Pmen_2173 2399607 - 2398993 - | hypothetical protein Pmen_2174 2401249 - 2399615 - | methyl-accepting chemotaxis sensory transducer TERM 1791 2401426 - 2401441 + H 74 -6.1 -4.48175 | GTGGGACGGGGCTGT GTCCC AGGGCC GGGAC TTTTGCTTCAGTTTT Pmen_2175 2401491 - 2402321 + | undecaprenyl pyrophosphate phosphatase TERM 1792 2402587 - 2402574 - g 72 -5.2 -4.35524 | overlap 2402576 GGCGCAAACCGAAAA CGCC CGGCAC GGCG GCACCGGTAGTGCGA Pmen_2176 2402318 - 2403040 + | hypothetical protein Pmen_2177 2403391 - 2403026 - | hypothetical protein Pmen_2178 2404298 - 2403411 - | aminoglycoside resistance protein TERM 1793 2404395 - 2404372 - R 100 -10.2 -5.78622 | TGAGCGCAAAAAAAA GCCCCTGAGC ATCG ACTCCGGGGC TGAGGAGGGTCGGCA Pmen_2179 2405824 - 2404436 - | RND efflux system outer membrane lipoprotein Pmen_2180 2409000 - 2405821 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1794 2405855 - 2405865 + g 81 -8.2 -4.56597 | AGACGGGCGACTTTG CGCG CTT CGCG TTTTTCGACGAAGCC Pmen_2181 2410266 - 2409028 - | RND family efflux transporter MFP subunit Pmen_2182 2411978 - 2410437 - | filamentation induced by cAMP protein Fic TERM 1795 2412030 - 2412020 - R 83 -2.4 -5.21236 | AATCGATAACAAAAA GCCG TTG CCGC GCGAAAACGATAATC Pmen_2183 2413078 - 2412164 - | LysR family transcriptional regulator Pmen_2184 2413296 - 2414318 + | alcohol dehydrogenase Pmen_2185 2414379 - 2415272 + | putative CheW protein Pmen_2186 2415669 - 2416538 + | AraC family transcriptional regulator TERM 1796 2416540 - 2416594 + T 76 -12.9 -3.29471 | gap 2, opp_overlap 2416577, overlap 2416542 GCAACTGGCCGTGAA GGCGC-CCGCATCTGGCCA-TGCCGGT CTA ACGAGCAATGGCCAGGTGCGGAGCGTG TTCGTGTGCTCAGCC TERM 1797 2416542 - 2416592 + T 90 -17.7 -3.214 | gap 2, opp_overlap 2416577, overlap 2416540 AACTGGCCGTGAAGG CGC-CCGCATCTGGCCA-TGCCGGT CTA ACGAGCAATGGCCAGGTGCGGAGCG TGTTCGTGTGCTCAG Pmen_2187 2417989 - 2416604 - | magnesium transporter Pmen_2188 2419833 - 2418544 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pmen_2189 2419870 - 2421369 + | GntR family transcriptional regulator TERM 1798 2421396 - 2421373 - T 95 -19.6 -3.28712 | CTGCGCGGCTGAGAA CTGCCCCGGC CGAG GCCGGGGCAG GCGCCATCAGAGGAT Pmen_2190 2422656 - 2421403 - | outer membrane porin TERM 1799 2421459 - 2421433 - G 72 -13 -3.16564 | CGGGTATTCGATGAA GGCGCGAATCTC GTT GAGATCCGGGCC GACATCGGTGCTGGA TERM 1800 2422911 - 2422936 + H 100 -17.5 -5.86061 | TTGGTTACGAGTTGC GGCCGCACCGG TTAT CCGGCGCGGCC TTTTTTTTCGTCCAG Pmen_2191 2423069 - 2423395 + | hypothetical protein Pmen_2192 2423392 - 2423811 + | hypothetical protein Pmen_2193 2424494 - 2423814 - | ICC-like putative phosphoesterase Pmen_2194 2427120 - 2424508 - | DEAD/DEAH box helicase domain-containing protein Pmen_2195 2428778 - 2427120 - | ATP-dependent DNA ligase Pmen_2196 2429782 - 2428775 - | exonuclease of the beta-lactamase fold involved in RNA processing-like protein Pmen_2197 2430113 - 2430433 + | cytochrome c, class I Pmen_2198 2430468 - 2431001 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pmen_2199 2431004 - 2433196 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Pmen_2200 2434386 - 2433238 - | hypothetical protein Pmen_2201 2434607 - 2435509 + | LysR family transcriptional regulator Pmen_2202 2436027 - 2435506 - | DinB family protein TERM 1801 2437216 - 2437226 + G 74 -2.4 -4.81212 | GGCGATGTCGCTTTT GCCG TAA CGTC TTTTCTTCTGATGGC Pmen_2203 2436352 - 2438055 + | ABC transporter related Pmen_2204 2439017 - 2438082 - | LysR family transcriptional regulator TERM 1802 2438547 - 2438558 + g 70 -2.2 -4.62783 | AGGGCCGACAGCAAT GGCA ACCA TGTC TTTTTCGACTGCGTC Pmen_2205 2440075 - 2439173 - | LysR family transcriptional regulator TERM 1803 2440183 - 2440164 - H 80 -11.4 -3.75105 | TCAACTCATCAAGAA GGCCCGCA ATGG TGCAGGCC AAAGACAGGAGGAGT Pmen_2206 2440203 - 2441033 + | short-chain dehydrogenase/reductase SDR Pmen_2207 2441067 - 2441327 + | hypothetical protein TERM 1804 2441351 - 2441373 + T 100 -13.5 -5.15969 | opp_overlap 2441351 2441355 TTGGAAGACCAGAGA GAAACCGGG CTCGT CCCGGTTTC TTTTTTACGTTGAAA TERM 1805 2441373 - 2441351 - T 76 -13.5 -3.00923 | opp_overlap 2441351, overlap 2441355 TTGGAAGACCAGAGA GAAACCGGG CTCGT CCCGGTTTC TTTTTTACGTTGAAA TERM 1806 2441369 - 2441355 - T 75 -8.5 -4.16904 | opp_overlap 2441351, overlap 2441351 AAGACCAGAGAGAAA CCGGG CTCGT CCCGG TTTCTTTTTTACGTT Pmen_2208 2441987 - 2441715 - | CopG family transcriptional regulator Pmen_2209 2442547 - 2442891 + | hypothetical protein Pmen_2210 2442981 - 2444243 + | outer membrane efflux protein TERM 1807 2445491 - 2445473 - g 74 -5.2 -4.51765 | opp_overlap 2445473, overlap 2445469 2445475 GACAATGCAAAGAAA CTCCATGA GTC CCATGGCG TGATTCGTGCCCTGG Pmen_2211 2444240 - 2445700 + | RND family efflux transporter MFP subunit Pmen_2212 2445697 - 2448846 + | CzcA family heavy metal efflux protein TERM 1808 2448891 - 2448856 - f 100 -17.7 -3.88787 | gap 1 CTATAGCTTTACAAA CCCGGGCAAGCCACGC GCCAA GC-TGACTTGCCCGGG TAACGCGGCAGGCAG Pmen_2213 2448992 - 2449324 + | hypothetical protein TERM 1809 2449425 - 2449402 - f 100 -16 -4.58303 | gap 1, opp_overlap 2449394 GGAAATATGACAAAA GCGCGCTCGGC TAT GCCG-GCGCGC TTGGCGCATATATCC TERM 1810 2449890 - 2449880 - g 75 -3.2 -4.72272 | overlap 2449882 GCGGTGCAGTAAAAA CACG GTT CATG GATACCGAAATCAAG Pmen_2214 2449480 - 2450802 + | outer membrane porin TERM 1811 2450812 - 2450837 + T 73 -13.3 -2.80492 | opp_overlap 2450816, overlap 2450809 CTCTAACCCTGGCAA GCGAGCGGG TTGATTGC CCCGCTCGC TCCTTGGTCCTGCTG TERM 1812 2450891 - 2450906 + T 100 -11.8 -5.29385 | opp_overlap 2450885 TTGGAGACAGCCCTT GGCGCC CTAG GGCGCC TTTTTTACTTAGGTT Pmen_2215 2451442 - 2450981 - | hypothetical protein Pmen_2216 2452256 - 2451414 - | hypothetical protein TERM 1813 2452168 - 2452150 - GR 71 -6.6 -4.26903 | TGCACTGCAGGAAAA TGGGGATC GTC GGCCCCCA CGTTGACCACGCCAA Pmen_2217 2453357 - 2452266 - | copper resistance B precursor Pmen_2218 2453658 - 2453347 - | hypothetical protein Pmen_2219 2455485 - 2453671 - | CopA family copper resistance protein TERM 1814 2454892 - 2454904 + g 73 -4.1 -4.66833 | CTTGTGGTAGTTGTA GTAGT CCG ACTGC TTTTTGAGCTTGGCC Pmen_2220 2455880 - 2455674 - | hypothetical protein TERM 1815 2455967 - 2456007 + H 91 -7.7 -4.73677 | gap 1, opp_overlap 2455973, overlap 2455969 ACCACGAAGCCCTGT CAGCAACCTGATCTGAAC ATTACA GTTCTG-TCAGGTTGCTA TTTCTTTCTTGTAGG TERM 1816 2455969 - 2456005 + H 78 -10.3 -3.97183 | gap 1, opp_overlap 2455973, overlap 2455967 CACGAAGCCCTGTCA GCAACCTGATCTGAAC ATTACA GTTCTG-TCAGGTTGC TATTTCTTTCTTGTA Pmen_2221 2456164 - 2456424 + | hypothetical protein Pmen_2222 2456469 - 2457305 + | hypothetical protein Pmen_2223 2457302 - 2458096 + | hypothetical protein TERM 1817 2458295 - 2458280 - g 89 -2.4 -5.30189 | TAGAAGACGAAAAAA GCCACG AGTT CGCTGC ATTGAAAAGCCTGTT Pmen_2224 2458147 - 2458461 + | hypothetical protein TERM 1818 2458493 - 2458472 - T 78 -15.9 -2.62983 | TTTAGTGGGATAGCA GGTCAGCGC TCAA GCGCTGACC TGGGCCGAATAGCCA Pmen_2225 2458681 - 2458481 - | heavy metal transport/detoxification protein TERM 1819 2458756 - 2458730 - R 70 -10.2 -3.51924 | GCCGCACGGACAGAA TCGACCTTGACA CGA TGGCAAGGTCAA GTGTGCAGACGCTTG Pmen_2227 2459469 - 2459164 - | PadR family transcriptional regulator Pmen_2228 2460685 - 2459480 - | chromate transporter TERM 1820 2460661 - 2460644 - G 74 -5.5 -4.54553 | overlap 2460646 GAGAAAGATAAGAAA GACAGCC CATG GGCTGTG ATCGCTGGATCGGCG TERM 1821 2460726 - 2460749 + r 82 -12.6 -3.63694 | opp_overlap 2460725 2460724 2460732, overlap 2460732 GAAAGCCACATAATG TCGAAATTCG CTAT CGAATTTCGA TTATTCGCAGTGAAT Pmen_2229 2463391 - 2461028 - | copper-translocating P-type ATPase Pmen_2230 2463645 - 2463397 - | hypothetical protein Pmen_2231 2464258 - 2463725 - | blue (type1) copper domain-containing protein TERM 1822 2463987 - 2464003 + g 74 -12.3 -3.55622 | ATCTCTTTCTGGTGC GCGGCAT GGG ATGCCGC TTTGCCAAGATTGAA Pmen_2232 2464963 - 2464406 - | hypothetical protein TERM 1823 2465085 - 2465061 - R 73 -4.8 -4.58395 | overlap 2465062 2465064 GTCAGCTGGGAAAAA GCACGGCGCC ATAAA GGCGCCGCTA GGCCAAAGGAGCAAT TERM 1824 2465082 - 2465064 - R 74 -13.1 -3.23975 | overlap 2465062 2465061 AGCTGGGAAAAAGCA CGGCGCC ATAAA GGCGCCG CTAGGCCAAAGGAGC Pmen_2233 2465489 - 2465130 - | hypothetical protein Pmen_2234 2465696 - 2466373 + | two component heavy metal response transcriptional regulator Pmen_2235 2466376 - 2467752 + | heavy metal sensor signal transduction histidine kinase Pmen_2236 2468408 - 2467788 - | hypothetical protein TERM 1825 2468753 - 2468771 + r 100 -16 -4.17701 | TGAAACTTGGTTCGA GGCGGCCT CTA AGGCCGCC TTTATCATTTCTGCC Pmen_2237 2469045 - 2468803 - | hypothetical protein Pmen_2238 2469550 - 2469164 - | hypothetical protein Pmen_2239 2470846 - 2470166 - | hypothetical protein Pmen_2240 2471596 - 2470859 - | hypothetical protein Pmen_2241 2471985 - 2471644 - | hypothetical protein Pmen_2242 2472092 - 2472385 + | hypothetical protein TERM 1826 2472932 - 2472954 + G 77 -9.8 -3.91897 | overlap 2472933 CGACGACGCGTCCTG ACGGGACAGC TCA GCTGTTCCGC TTTGTGCATCGCGGC TERM 1827 2472933 - 2472953 + G 70 -13.3 -2.94924 | overlap 2472932 GACGACGCGTCCTGA CGGGACAGC TCA GCTGTTCCG CTTTGTGCATCGCGG Pmen_2243 2472394 - 2473521 + | high-affinity nickel-transporter Pmen_2244 2473522 - 2473962 + | membrane protein-like protein Pmen_2245 2473962 - 2474663 + | TraX family protein Pmen_2246 2475268 - 2474945 - | rhodanese domain-containing protein TERM 1828 2475143 - 2475127 - G 83 -2.1 -5.14563 | CCTTCCAGGAAAAAA GCAGTTC GGG GTCCTGC CATTTCGCGTTGGCG Pmen_2247 2476639 - 2475278 - | chromate transporter Pmen_2248 2477552 - 2476632 - | hypothetical protein Pmen_2249 2478813 - 2477854 - | phage integrase family protein Pmen_2250 2478996 - 2479898 + | hypothetical protein Pmen_2251 2481163 - 2479895 - | hypothetical protein TERM 1829 2480516 - 2480501 - G 90 -3.2 -5.4505 | CGGCTTAACAAAAAA GAACGA CATG CCGTCC GTCACAGAGTATCCA Pmen_2252 2482139 - 2481192 - | hypothetical protein Pmen_2253 2484056 - 2482149 - | hypothetical protein TERM 1830 2482275 - 2482287 + g 73 -3.5 -4.59773 | ACCATTGAGTCGCGC TAATT CCA AATTA TTTTTGACGCTAGAA TERM 1831 2483605 - 2483615 + g 100 -2.4 -5.68039 | opp_overlap 2483605 ATGTCATAAAAAACT TGGC ATA GCCC TTTTTTTCTAAATTT TERM 1832 2484944 - 2484928 - H 78 -2.3 -5.03314 | TCTATGTTCAAAAAA TAGCAAT ATA ATTTCTA GCTCTTTGAGCTAAC TERM 1833 2485235 - 2485221 - g 89 -2.1 -5.38054 | TTGGACAAACAAAAA TTCAC CTGGC GCGAA ATGGCTGGCAAGCCC Pmen_2254 2485164 - 2486336 + | hypothetical protein Pmen_2255 2486347 - 2487066 + | hypothetical protein TERM 1834 2487124 - 2487089 - T 78 -14 -3.25015 | gap 1, opp_overlap 2487092, overlap 2487092 GTTAAGTAGCACGAA CGAGCGGGGAAGGTGCC ATG GGC-CCTTCCCCGCTTT TCGTTCAGCGCCCTC TERM 1835 2487121 - 2487092 - T 95 -20.1 -2.8076 | gap 1, opp_overlap 2487092, overlap 2487089 AAGTAGCACGAACGA GCGGGGAAGGTGCC ATG GGC-CCTTCCCCGC TTTTCGTTCAGCGCC TERM 1836 2487092 - 2487121 + T 100 -20.1 -4.4078 | gap 1, opp_overlap 2487089 2487092 AAGTAGCACGAACGA GCGGGGAAGGTGCC ATG GGC-CCTTCCCCGC TTTTCGTTCAGCGCC Pmen_2256 2487417 - 2487157 - | membrane protein-like protein TERM 1837 2487225 - 2487247 + g 81 -12.6 -3.78934 | overlap 2487226 GACCGTGGCCGGCAG CGTCGCCGCC ATC GGCGGCGGCC TTCTTGTCCAGACGG TERM 1838 2487226 - 2487246 + g 79 -16.1 -2.87146 | overlap 2487225 ACCGTGGCCGGCAGC GTCGCCGCC ATC GGCGGCGGC CTTCTTGTCCAGACG TERM 1839 2487454 - 2487422 - R 85 -12.6 -3.72576 | opp_overlap 2487414 2487424 2487442, overlap 2487405 2487423 GTCTTTGGCATCAAA GGCCCCGGCACCGC GCGAG GCGATGCCGGGCTC CGTTAGCGTTTGGCG TERM 1840 2487452 - 2487423 - R 73 -13.6 -2.83403 | gap 1, opp_overlap 2487414 2487424 2487442, overlap 2487405 2487422 TCTTTGGCATCAAAG GCCCCGGCACCGC GCGAG GCGATGCCGGG-C TCCGTTAGCGTTTGG Pmen_2257 2487966 - 2487457 - | hypothetical protein Pmen_2258 2488413 - 2488132 - | hypothetical protein TERM 1841 2490418 - 2490407 - g 87 -7.2 -5.06414 | opp_overlap 2490407 2490406 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 1842 2490762 - 2490746 - g 79 -2.9 -5.08601 | opp_overlap 2490747, overlap 2490747 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_2260 2489829 - 2491130 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Pmen_2261 2492016 - 2491546 - | hypothetical protein TERM 1843 2492087 - 2492058 - R 100 -20.8 -4.61566 | TCTGAAAGGAGAAAA CCGGATGCGCGG AGCGAA CCGCGCATCCGG TCGCGAGCGGCAGGG Pmen_2262 2492567 - 2492103 - | hypothetical protein Pmen_2263 2493248 - 2492697 - | peptidase S14, ClpP TERM 1844 2493379 - 2493365 - H 75 -2.7 -5.00616 | GCTCTGGCGAAAAAA GGCTG AACGG CTGCC TCGAGCGGAACTCTG TERM 1845 2493593 - 2493567 - H 82 -9.4 -4.431 | overlap 2493568 CAGGCAGTCACAAAA CCGTGACCCG TCCCGCT CGGGTCACGC CTCGGCAACGAACGG TERM 1846 2493592 - 2493568 - H 74 -12.9 -3.25378 | overlap 2493567 AGGCAGTCACAAAAC CGTGACCCG TCCCGCT CGGGTCACG CCTCGGCAACGAACG Pmen_2264 2493627 - 2494040 + | hypothetical protein Pmen_2265 2494578 - 2494120 - | membrane protein-like protein Pmen_2266 2494600 - 2495610 + | cytochrome c, monohaem TERM 1847 2496866 - 2496914 + G 100 -20.4 -3.39482 | overlap 2496848 2496847 CATCTATTACTGGCT GCCGCATTTTTCCGGGCGCATG CCCTC CATGCGCCTGGGCAAATGGGGC TTCTGGCTGGTGTTC TERM 1848 2497087 - 2497105 + G 81 -8.8 -4.54727 | GTATCGCCACCGTGC TGCTGGAC ATC GTCCTGCA TTTTCGTTTCGGCCA TERM 1849 2497906 - 2497926 + G 77 -14 -3.45023 | overlap 2497886 ATCTCGCGCCGCGTG CCACGGCG CATGA CGCCGTGG TTCTGGTGATGCTCG Pmen_2267 2495607 - 2498138 + | cytochrome-c oxidase Pmen_2268 2498138 - 2498491 + | hypothetical protein Pmen_2269 2498482 - 2499297 + | membrane protein-like protein TERM 1850 2499404 - 2499420 + F 71 -6.5 -4.20368 | overlap 2499405 TCAAGTTGTTTTTCT GTCGCGA GAC TCGCGAA TTTATCTTGGCGTGC Pmen_2270 2499971 - 2500423 + | hypothetical protein Pmen_2271 2500557 - 2500781 + | hypothetical protein TERM 1851 2500939 - 2500961 + G 82 -12 -4.03234 | TAACAGTTGCGCCAG CGCTTGCGAA CAT TGCGCAAGCG TTTGTCTGACCGAGA Pmen_2272 2500886 - 2501212 + | hypothetical protein katE 2503562 - 2501421 - | hydroperoxidase II TERM 1852 2502499 - 2502469 - G 72 -11.8 -3.53012 | opp_overlap 2502462 2502474 GGGTCGTTGCTGAAA TCGATGCCGGGCAC CAC GTGCCCGACGTGGA ACGCCGCCTGTTCGG TERM 1853 2503527 - 2503544 + g 74 -10.5 -3.827 | overlap 2503511 GGTACCGGCCATCTG GCTGCCG TTCT CGGCGGC TTTCGATTGCTTCTT Pmen_2274 2503837 - 2504361 + | outer membrane protein-like protein TERM 1854 2505179 - 2505191 + G 71 -9.1 -3.82378 | overlap 2505175 GCAGACCAGCTCGAT CACCG GTT CGGTG TTCTTCTGGGTGGAT Pmen_2275 2504397 - 2505527 + | MscS mechanosensitive ion channel Pmen_2276 2506019 - 2505537 - | CinA domain-containing protein TERM 1855 2506214 - 2506224 + H 71 -8.2 -4.08216 | CTCCGCTCTCCTACC CGCC CGT GGCG TTTTGCCCGGGATGC TERM 1856 2507560 - 2507593 + G 74 -8.1 -4.21607 | gap 1, overlap 2507576 CCGGCGCACCGGCGG GCTGGCCGACACCATC GAG GATGGCGTCAGC-GGC TTTCTCTTCGATGAA glgA 2506271 - 2507797 + | glycogen synthase TERM 1857 2508685 - 2508663 - g 82 -12.7 -3.91357 | opp_overlap 2508662 2508663 GGAGAACGAGAACAA CGCCGCGCA TCTGC TGCGCGACG GTTTCGATGCGCAGT Pmen_2278 2507797 - 2509551 + | malto-oligosyltrehalose trehalohydrolase Pmen_2279 2509548 - 2511602 + | 4-alpha-glucanotransferase TERM 1858 2513378 - 2513358 - g 73 -12.5 -3.44527 | opp_overlap 2513371 CACGCACGACCACAA GCGCGGCGA GGA TTGCCGCGC GCGCCTGGCGGTGCT Pmen_2280 2511595 - 2514339 + | malto-oligosyltrehalose synthase Pmen_2281 2514356 - 2514625 + | hypothetical protein Pmen_2282 2514636 - 2516750 + | glycogen debranching enzyme GlgX TERM 1859 2516793 - 2516755 - f 76 -7.3 -4.56597 | opp_overlap 2516791, overlap 2516756 TGCTGCGCTGAAAAA GGCTTGGAGTTGCGTCG CCTGC CGGCGCAATTCCAGGCG CTCCGCGGACCGGCA Pmen_2283 2517049 - 2518317 + | alcohol dehydrogenase TERM 1860 2518328 - 2518303 - f 71 -7.5 -4.15044 | gap 1, overlap 2518289 2518288 2518304 TCCCGGTCGAAGAAA CCGGGTCGC-CT GTG AGCGCGGCCCGA CGAGGTGCACTGCAA Pmen_2284 2518346 - 2519134 + | endonuclease/exonuclease/phosphatase Pmen_2285 2519131 - 2520333 + | cardiolipin synthase 2 Pmen_2286 2520330 - 2521310 + | integral membrane protein-like protein TERM 1861 2521356 - 2521304 - f 90 -18.4 -3.14463 | gap 1, overlap 2521306 AAGCGTGCCCAGCAA GACCTGAGGCCAGCGCCTGCGCGGC GTGA GTCGCGCAGGCGCTGGACGCAAA-C ACGCCGCCCGACGCA TERM 1862 2521355 - 2521306 - f 100 -22.1 -3.13403 | overlap 2521304 GCGTGCCCAGCAAGA CCTGAGGCCAGCGCCTGCGCGGC GTGA GTCGCGCAGGCGCTGGACGCAAA CACGCCGCCCGACGC TERM 1863 2521684 - 2521643 - g 76 -8.5 -4.1822 | gap 1 CTGCATCCGAAGAAA GGCGCCCCCACCCCG-GCGC ACC GCGTGCAGCGCTGAGGCGCC TCACTGCTGCGGAGG Pmen_2287 2521421 - 2521678 + | hypothetical protein Pmen_2288 2524156 - 2521685 - | glycogen/starch/alpha-glucan phosphorylase TERM 1864 2522728 - 2522756 + g 70 -8.2 -3.9461 | gap 2, opp_overlap 2522728, overlap 2522729 GGTTGACCTGGAACA G-CCAGCGGCG-GA AGG TCACGCCGTTGGTC TTGTTGTTGACCCGG TERM 1865 2522729 - 2522754 + g 72 -11.9 -3.56318 | gap 1, opp_overlap 2522728, overlap 2522728 GTTGACCTGGAACAG CCAGCGGCG-GA AGG TCACGCCGTTGG TCTTGTTGTTGACCC Pmen_2289 2524347 - 2524778 + | hypothetical protein Pmen_2290 2524775 - 2525872 + | hypothetical protein TERM 1866 2525888 - 2525922 + G 77 -11.3 -3.85698 | opp_overlap 2525881 2525879 2525905, overlap 2525905 2525909 CGAAAGCATCGACAT CCAGGTGGCCGACGA GAGCA TCGCCGGCACCCTGG TTTCTCCGGCCAGCC Pmen_2291 2525859 - 2526629 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Pmen_2292 2526695 - 2527108 + | CBS domain-containing protein TERM 1867 2527150 - 2527119 - T 100 -22.4 -2.53995 | overlap 2527129 ATTGATGCCAAGGGA TGCGCACCAACCGC ACAT GCGGCTGGTGCGCA TGGCGCACCCTATCC Pmen_2293 2529391 - 2527253 - | glycogen branching enzyme Pmen_2294 2532708 - 2529406 - | trehalose synthase Pmen_2295 2534708 - 2532726 - | alpha amylase, catalytic region TERM 1868 2534782 - 2534760 - R 88 -4.1 -5.52384 | gap 1, overlap 2534761 GGGGTATGAAAAAAA CGAGCGCAGC GCAG GCTG-GCTCT AAAAATTCCGAGGCA Pmen_2296 2535365 - 2534841 - | MgtC/SapB transporter Pmen_2297 2535535 - 2535912 + | Rho termination factor domain-containing protein TERM 1869 2535978 - 2536018 + T 100 -24.9 -3.69395 | gap 1, opp_overlap 2535967 GAATGCGTCTCTCCA CGGCGCCTGCGCCGATGC GCCGCG GCATCGG-GCAGGCGCCG TTCTTACCTACTCGC TERM 1870 2536032 - 2536054 + T 70 -9.8 -3.53012 | overlap 2536031 CGTTCTTACCTACTC GCGGGCGC CGCCTTT GCGTCCGC TTTCGCCGGGCACCA Pmen_2298 2536460 - 2536026 - | hypothetical protein TERM 1871 2536092 - 2536121 + g 72 -13.6 -3.14132 | gap 1 GGTCCAGGGCTCACC GTCGAGC-GGCGC CGAAC GCGCCAGCTCGGC TTCGTCGAGGCCGGC Pmen_2299 2536884 - 2536522 - | hypothetical protein Pmen_2300 2538151 - 2536985 - | alcohol dehydrogenase Pmen_2301 2539345 - 2538209 - | glutamate--cysteine ligase, GCS2 Pmen_2302 2539501 - 2540901 + | hypothetical protein Pmen_2303 2540916 - 2541884 + | methyltransferase small Pmen_2304 2542394 - 2541927 - | hemerythrin HHE cation binding domain-containing protein TERM 1872 2542143 - 2542166 + g 74 -10.3 -3.8186 | gap 1, overlap 2542154 2542157 CTTGATGTCCGGCAG CACCAGCGCC TCGAC GGCGC-GGTG TTCTTCCTTCGCCTC TERM 1873 2542477 - 2542424 - R 73 -13.7 -2.71144 | gap 1, overlap 2542469 CAGGTCTTGTAATCA CGCAGGCTGGAACGTCAGGGCCCGCT AGA AGCGGGCCCTGACGAAGCGGTC-ACG AGTTACGACCGCCGT Pmen_2305 2542643 - 2542473 - | hypothetical protein Pmen_2306 2543612 - 2542758 - | short-chain dehydrogenase/reductase SDR TERM 1874 2543475 - 2543441 - G 79 -17.1 -2.52896 | gap 1, opp_overlap 2543469 CCAGGGCGTAATGCA CGGCGACGGC-GCGGC CGAT GCCGCTGTCGCCGCCG GTGATGATCGCCACC Pmen_2307 2544504 - 2543641 - | UDP-glucose pyrophosphorylase TERM 1875 2544477 - 2544460 - G 76 -8.4 -4.16842 | GGTAGCGGGAAGAAA GCGGGT ACCGTA ACCCGC AGCGGGGAATAAGCA Pmen_2308 2544953 - 2544657 - | hypothetical protein Pmen_2309 2545906 - 2545010 - | 17 kDa surface antigen Pmen_2310 2547798 - 2545993 - | hypothetical protein Pmen_2311 2548984 - 2547791 - | hypothetical protein Pmen_2312 2549688 - 2548984 - | ABC transporter related TERM 1876 2549129 - 2549184 + g 78 -15.5 -3.14132 | gap 2 TGCTCCTGCGCGCGC TCCACCAGCAGCTGCATGACCCGCTCG GCAT TGAGCGGGTCGAGC-GATGC-GGTGGG TTCGTCGGCCAGCAC Pmen_2313 2552744 - 2549688 - | protein kinase Pmen_2314 2553491 - 2552760 - | protein phosphatase 2C domain-containing protein Pmen_2315 2554177 - 2553488 - | hypothetical protein TERM 1877 2553941 - 2553927 - G 81 -11.4 -3.92542 | overlap 2553930 GTCAGCGGGAAATAA CGACCG ACC CGGTCG ACGCTGGGCATCATC Pmen_2316 2557689 - 2554174 - | ImcF domain-containing protein TERM 1878 2555477 - 2555447 - G 79 -8.3 -4.3739 | opp_overlap 2555448, overlap 2555448 CATTGGCCGAGAAAA TCCTGGAAGTACA GGTTG CGTACCTCCAGGG CCAGGGTGGCGGCGT Pmen_2317 2559047 - 2557686 - | hypothetical protein TERM 1879 2558828 - 2558794 - G 90 -17.9 -3.53091 | gap 1 ATGGTGTTGCGCAAA CGCGTCAGCAGCGCCA GCAG CGGCGCCGCTG-CGCG CTCCAGCGGGTTGAG Pmen_2318 2560388 - 2559054 - | hypothetical protein Pmen_2319 2560876 - 2560409 - | hypothetical protein Pmen_2320 2562393 - 2560951 - | FHA domain-containing protein Pmen_2321 2562769 - 2563791 + | ImpA domain-containing protein Pmen_2322 2563855 - 2564370 + | hypothetical protein TERM 1880 2564457 - 2564440 - g 75 -14.1 -3.32963 | ACTGCTACCGCAGAA GGCGGCG ACTT CGCCGCC CTCCTCCTGCAGGAA Pmen_2323 2564386 - 2565882 + | hypothetical protein Pmen_2324 2565959 - 2566447 + | hypothetical protein TERM 1881 2566451 - 2566484 + F 70 -10.2 -3.53444 | opp_overlap 2566449 2566453, overlap 2566454 GTCAAGGTATGAACG CAGCCCACCCCGAG CAGGAA CTCGGGGTGGGTAA TTTCAAACCCGGTCA TERM 1882 2566482 - 2566453 - f 78 -15.7 -2.57721 | opp_overlap 2566451 2566454, overlap 2566449 CAAGGTATGAACGCA GCCCACCCCGAGC AGGA ACTCGGGGTGGGT AATTTCAAACCCGGT TERM 1883 2566454 - 2566481 + F 86 -18.5 -2.90496 | opp_overlap 2566453 2566449, overlap 2566451 AAGGTATGAACGCAG CCCACCCCGAG CAGGAA CTCGGGGTGGG TAATTTCAAACCCGG Pmen_2325 2566521 - 2566952 + | hypothetical protein Pmen_2326 2566949 - 2567395 + | hypothetical protein Pmen_2327 2567442 - 2568227 + | virulence protein, SciE type Pmen_2328 2568230 - 2568742 + | GPW/gp25 family protein Pmen_2329 2568739 - 2570598 + | hypothetical protein Pmen_2330 2570613 - 2571599 + | hypothetical protein TERM 1884 2573437 - 2573401 - g 88 -7.4 -5.06451 | gap 2, overlap 2573402 2573405 GAGCACCTGAAAAAA CGCATCATCGGTCAGGAC CAC GCCCTGGC-GATGAT-CG CCAAGCGCATCCAGA Pmen_2331 2571592 - 2574294 + | ATPase TERM 1885 2576058 - 2576047 - g 70 -2.2 -4.66609 | GATCGCACCGAAAAA GTCG GCAG CAAC GAGAAGATCAGCATC Pmen_2332 2574325 - 2576550 + | Rhs element Vgr protein Pmen_2333 2576561 - 2576995 + | hypothetical protein TERM 1886 2577359 - 2577407 + G 100 -13.8 -4.36914 | gap 1 CGGTACTCGGCCCCA GGCAGTGGCAGCC-GGGGCTG CTCGGCGT CGCCCCCGGGCTGCCGCAGCC TTTTCTCGAACAGAC Pmen_2334 2577010 - 2578122 + | hypothetical protein TERM 1887 2578943 - 2578964 + G 70 -10.1 -3.72231 | GCTGGCGCTCAGTCG CACCTTGCG CGTG CGCAAGGAG TTCTTCCATATCTGG Pmen_2335 2578122 - 2579159 + | 3-oxoacyl-(acyl carrier protein) synthase Pmen_2336 2579159 - 2580244 + | hypothetical protein TERM 1888 2580279 - 2580269 - g 85 -5.4 -5.04385 | CAGATGCCTAAAAAA CCAT TGG ATGG GCTGATCATCCGCAC Pmen_2337 2580257 - 2581153 + | hypothetical protein TERM 1889 2581266 - 2581216 - g 86 -6.9 -4.9218 | gap 1 CATCGATCACAAAAA TGCTCGCCCAACACATCGAAGAAG CCGC CTTCCTCGGCCTGCTGCGC-AGCA TCGCCGTCCGCCAGC Pmen_2338 2581197 - 2582438 + | hypothetical protein Pmen_2339 2583542 - 2582493 - | UDP-galactose 4-epimerase TERM 1890 2584488 - 2584471 - g 74 -9.8 -3.78934 | GGGCTTTCAGAACAA CCCGCC GGACCA GGCGGG CATCGGCCGGCCGCG Pmen_2340 2583821 - 2585014 + | glycosyl transferase, group 1 TERM 1891 2586096 - 2586112 + G 71 -13.7 -2.87564 | opp_overlap 2586075 CATGGATCAGGTCGT GGGCCAG GCG CTGGCCC TGTATCAGCGCATCG Pmen_2341 2585002 - 2586198 + | UDP-galactopyranose mutase Pmen_2342 2586208 - 2587350 + | hypothetical protein TERM 1892 2587544 - 2587506 - g 73 -11.1 -3.75169 | gap 2, opp_overlap 2587532, overlap 2587532 CAGTACGGGATGAAA CTGCTGGTCGATGCGATGG CCA CCAACG-ACCG-CCAGCAG GCCGACGTGTGGTTC Pmen_2343 2587347 - 2589122 + | ABC transporter related Pmen_2344 2589274 - 2589579 + | hypothetical protein Pmen_2345 2591796 - 2589592 - | xanthine dehydrogenase, molybdenum binding subunit apoprotein TERM 1893 2591354 - 2591387 + g 71 -9.5 -3.80573 | gap 1, overlap 2591355 2591357 AGTTCGGCCGGGGCG TC-ATGGGCGCGCGGC AGC GCCGCGCGCAAATCGG TTTCGTGCTCGTCGG Pmen_2346 2592782 - 2591793 - | molybdopterin dehydrogenase, FAD-binding TERM 1894 2592365 - 2592395 + g 100 -18.2 -4.15222 | opp_overlap 2592341 2592339 TGCGATTGAGGCCAT CGCGCGCCGGGCAG CCG CTGCCGGGCTCGCG TTTGTTGCAGGGCGT Pmen_2347 2593288 - 2592779 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pmen_2348 2593459 - 2594346 + | hypothetical protein Pmen_2349 2594742 - 2594365 - | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_2350 2595368 - 2594745 - | hypothetical protein Pmen_2351 2596734 - 2595376 - | glutathione reductase TERM 1895 2595999 - 2596029 + g 75 -4.7 -4.65895 | gap 2, opp_overlap 2595970, overlap 2596000 GCACGCGGCCGTCCT TGAG-CG-TGGCAGC CAG GCTGCCATCGGCGCG TTTTTCGATGCGGGC Pmen_2352 2596808 - 2597230 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1896 2597264 - 2597233 - T 100 -23.2 -3.54424 | opp_overlap 2597240 GCCGATCCCCTGAAA TGCAAGACGCCACC GGCA GGTGGCGTCTTGCA GCGCTCGCTGCGCAC TERM 1897 2597240 - 2597257 + T 72 -12.7 -3.02511 | opp_overlap 2597233 CCCTGAAATGCAAGA CGCCACC GGCA GGTGGCG TCTTGCAGCGCTCGC Pmen_2353 2598154 - 2597315 - | UDP-glucose pyrophosphorylase Pmen_2354 2599559 - 2598198 - | UDP-glucose 6-dehydrogenase TERM 1898 2599021 - 2598991 - G 77 -8.1 -4.36914 | TGGTTGCGCAGAAAA GGCGCGTACAGCC TGCGC AGCAGCTCGCGCC CACGCTCGTCGTCGC Pmen_2355 2599851 - 2601647 + | pyruvate decarboxylase Pmen_2356 2602882 - 2601650 - | sodium/hydrogen exchanger TERM 1899 2603184 - 2603236 + G 74 -15.5 -2.59881 | gap 1, overlap 2603183 2603198 CGTCGTGGTGATCTG CGGCGCCAGCGCAGGCGTGGGGCG CGCCAC CGCCC-ATGCTTTCGCCGCCGCCG GTTATGCCATAGGTC Pmen_2357 2603149 - 2604126 + | short chain dehydrogenase Pmen_2358 2604549 - 2604220 - | hypothetical protein TERM 1900 2604973 - 2604963 - g 79 -6.8 -4.60889 | overlap 2604965 AATGACCGGGAAAAA GCCT CCG AGGC GGGACGCAAGGGTGG Pmen_2359 2604843 - 2605019 + | hypothetical protein TERM 1901 2605030 - 2605050 + F 100 -14 -5.50723 | opp_overlap 2605019 AATAGGCAGCCTCAG GGAGGCCC GCTCA GGGCCTCC TTTTTATTTTCGTCA Pmen_2360 2605166 - 2606149 + | short chain dehydrogenase TERM 1902 2606316 - 2606305 - f 85 -7.2 -4.85599 | opp_overlap 2606307, overlap 2606307 TCTAGGGTATAAAAA CCGG ACCA CCGG AGCCTCGACTCTCCC TERM 1903 2606541 - 2606509 - g 71 -12.1 -3.28924 | CATGCCCTGGCAGAA GCGG-CGCAGCTGGA AGTCA TCCAGC-GCGACCGC GAGCGCCGCCTGCCC TERM 1904 2606956 - 2606973 + G 74 -10.5 -3.85698 | opp_overlap 2606940 GCCCTGGACGATCAG GGCCGGC CGTG GCTGGCC TTTATCCAGCGCGGG Pmen_2361 2606392 - 2607630 + | acyl-CoA dehydrogenase type 2 Pmen_2362 2607634 - 2608833 + | acyl-CoA dehydrogenase type 2 Pmen_2363 2608833 - 2610236 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Pmen_2364 2610291 - 2611085 + | NLPA lipoprotein TERM 1905 2611611 - 2611585 - g 83 -13.6 -3.85698 | opp_overlap 2611572 2611571 TCCGGCGGGCAGAAA CAGCGCGTGGGC ATC GCCCGCGCCCTG GTGCACGATCCGCAG Pmen_2365 2611087 - 2612184 + | ABC transporter related Pmen_2366 2612168 - 2612821 + | binding-protein-dependent transport systems inner membrane component Pmen_2367 2614008 - 2613040 - | luciferase family protein TERM 1906 2613937 - 2613927 - G 79 -6.8 -4.70169 | overlap 2613930 CGAGAGGGAAGAAAA GACC CAG GGTC AGGCGGCCTTGGCGG Pmen_2368 2616008 - 2614227 - | potassium efflux system protein Pmen_2369 2616802 - 2616332 - | hypothetical protein Pmen_2370 2619883 - 2617040 - | ATPase TERM 1907 2617140 - 2617181 + g 85 -16.5 -3.40522 | overlap 2617126 GGTGCTTCGGCGCTG GTCGGAGCGGGTTGCTTGC GGTC GAACGCGACCCGCTCCGCC TTGTCGTCCCAACGT TERM 1908 2619320 - 2619365 + g 76 -14.7 -3.19246 | overlap 2619341 GAGCGCATCCTTCAC CCGTGGCGACACGCCGATC TCGCCTTC GAACGGCTTGTCGCCACGC TTGGCTTCGGCTTCG TERM 1909 2619936 - 2619911 - R 72 -13.3 -2.64616 | gap 1, opp_overlap 2619911 TGGTCATTGAGATGA CGAGG-GCCGCA GGC CGCGGCACCTCG TCTCCTGGTGGGACT TERM 1910 2620804 - 2620778 - R 100 -16 -5.32944 | opp_overlap 2620778, overlap 2620726 TGGAGAATGAAAAAA GCCTCGTAAATC AGT GATCTACGAGGC TTTTCGAATTGGAGG TERM 1911 2620778 - 2620804 + r 100 -13.8 -4.19238 | opp_overlap 2620726 2620778 TGGAGAATGAAAAAA GCCTCGTAAATC AGT GATCTACGAGGC TTTTCGAATTGGAGG TERM 1912 2620917 - 2620898 - R 84 -11.4 -4.06502 | opp_overlap 2620901 CAGCCTTAAATCAAA CGAGCCGC CTTG GCGACTCG TGTAAAACTGGAGCG Pmen_2373 2621629 - 2621069 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1913 2621600 - 2621581 - G 72 -5.6 -4.32436 | ACAGCAGGATGAAAA CCGGAATC AGCA GAACCCGG AGCACGGTAAGCAAG uvrC 2623486 - 2621663 - | excinuclease ABC subunit C TERM 1914 2622830 - 2622842 + g 70 -6.2 -4.21194 | GCGCTCGAACTCCAG GGCC ATGGA GGCC TTTTCCATACTGGCC Pmen_2375 2624133 - 2623489 - | two component LuxR family transcriptional regulator TERM 1915 2624221 - 2624209 - H 81 -5.5 -4.7373 | TCACCTTAGCAAAAA GCCAG GGC CTGAC CTAGCTTGGCGCACG Pmen_2376 2624551 - 2625219 + | hypothetical protein TERM 1916 2625241 - 2625256 + F 100 -11.8 -5.06414 | overlap 2625250 TTCGTCCCCCTTAGA GCCCGC TTCG GCGGGC TTTTTCTTGCGCGCC Pmen_2377 2625355 - 2625747 + | hypothetical protein Pmen_2378 2625748 - 2626107 + | hypothetical protein Pmen_2379 2626107 - 2626406 + | DsrH family protein Pmen_2380 2626403 - 2626738 + | DsrC family protein TERM 1917 2627035 - 2627080 + G 76 -14.9 -3.13403 | gap 2, overlap 2627033 AAGCGTCACCTGCCC TG-GTAC-CTGCTGGCGGCCA AGGCGC TGGCCGCCAGCGGCGTGCGCA TCTTCATGCACGGCG Pmen_2381 2626735 - 2627730 + | hypothetical protein Pmen_2382 2627805 - 2628803 + | glutathione S-transferase domain-containing protein Pmen_2383 2630236 - 2628848 - | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase TERM 1918 2630358 - 2630380 + r 70 -10.4 -3.53761 | opp_overlap 2630358 2630359, overlap 2630359 GCGTGCTGCCTGAAA CCGGGGCGGC CGC GCCACCCCGC TTTAGCACCGGCTTA TERM 1919 2630380 - 2630358 - R 79 -12.6 -3.53012 | opp_overlap 2630358 2630359, overlap 2630359 GCGTGCTGCCTGAAA CCGGGGCGGC CGC GCCACCCCGC TTTAGCACCGGCTTA TERM 1920 2630379 - 2630359 - R 79 -16.1 -2.71712 | opp_overlap 2630359 2630358, overlap 2630358 CGTGCTGCCTGAAAC CGGGGCGGC CGC GCCACCCCG CTTTAGCACCGGCTT TERM 1921 2630359 - 2630379 + r 73 -13.9 -2.72043 | opp_overlap 2630358 2630359, overlap 2630358 CGTGCTGCCTGAAAC CGGGGCGGC CGC GCCACCCCG CTTTAGCACCGGCTT Pmen_2384 2631673 - 2630393 - | seryl-tRNA synthetase TERM 1922 2630503 - 2630550 + g 70 -11.2 -3.60971 | CCAGGGTACGCCCTA CCGCCAGGCCGGAGCCGTTG AGGGTGTG CACCAGTTCCGGCTTGCCGG TTTCCGGGTTGCGGT Pmen_2385 2632135 - 2631752 - | camphor resistance protein CrcB TERM 1923 2631907 - 2631893 - G 72 -5.6 -4.35742 | ACTGAAGGACGAAAA GGTGGT GAA ACCGCC CAGCACACCGGTAAT Pmen_2386 2633454 - 2632132 - | recombination factor protein RarA TERM 1924 2633428 - 2633408 - G 77 -12.5 -3.64703 | CTGGTGGCACGCAAA CGGGCAGCC AGA GGCTGCGCG ACGGGTTGGCGGCCG lolA 2634084 - 2633458 - | outer-membrane lipoprotein carrier protein TERM 1925 2633973 - 2634001 + g 90 -18.9 -3.14683 | opp_overlap 2633958 2633957, overlap 2633997 GCGCGCTGATGGTCT GCGCCTGGCTGAG CAG CTCGGTCAGGCGC TTGGTGGCCGCCTCT Pmen_2388 2636617 - 2634209 - | DNA translocase FtsK Pmen_2389 2636811 - 2637761 + | thioredoxin reductase aat 2637817 - 2638497 + | leucyl/phenylalanyl-tRNA--protein transferase Pmen_2391 2638552 - 2639259 + | arginyl-tRNA-protein transferase infA 2639395 - 2639613 + | translation initiation factor IF-1 TERM 1926 2639664 - 2639619 - T 100 -25.7 -3.17075 | gap 1, opp_overlap 2639620 2639627 2639633, overlap 2639622 2639627 2639633 CGCCCGTTAAGCCAA GCACCAAACGAAAACGCCCGGC ACT GCCGGGCGTTTTCGTT-GGTGT TGCCTTCGATCAGGC TERM 1927 2639620 - 2639663 + T 100 -29.2 -3.19192 | gap 1, opp_overlap 2639619 2639622 2639627 2639633, overlap 2639627 2639633 GCCCGTTAAGCCAAG CACCAAACGAAAACGCCCGGC ACT GCCGGGCGTTTTCGTT-GGTG TTGCCTTCGATCAGG TERM 1928 2639661 - 2639622 - T 100 -26 -2.78712 | gap 1, opp_overlap 2639620 2639627 2639633, overlap 2639619 2639627 2639633 CCGTTAAGCCAAGCA CCAAACGAAAACGCCCGGC ACT GCCGGGCGTTTTCGTT-GG TGTTGCCTTCGATCA TERM 1929 2639627 - 2639657 + T 100 -25.6 -3.39529 | opp_overlap 2639622 2639619 2639627 2639633, overlap 2639620 2639633 AAGCCAAGCACCAAA CGAAAACGCCCGGC ACT GCCGGGCGTTTTCG TTGGTGTTGCCTTCG TERM 1930 2639657 - 2639627 - T 100 -25.6 -3.85362 | opp_overlap 2639627 2639620 2639633, overlap 2639622 2639619 2639633 AAGCCAAGCACCAAA CGAAAACGCCCGGC ACT GCCGGGCGTTTTCG TTGGTGTTGCCTTCG TERM 1931 2639651 - 2639633 - T 100 -17.4 -4.59376 | opp_overlap 2639627 2639620 2639633, overlap 2639627 2639622 2639619 AGCACCAAACGAAAA CGCCCGGC ACT GCCGGGCG TTTTCGTTGGTGTTG TERM 1932 2639633 - 2639651 + T 100 -17.4 -4.49337 | opp_overlap 2639633 2639627 2639622 2639619, overlap 2639627 2639620 AGCACCAAACGAAAA CGCCCGGC ACT GCCGGGCG TTTTCGTTGGTGTTG Pmen_2393 2641944 - 2639674 - | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 1933 2640246 - 2640268 + g 73 -13.4 -3.21747 | TCTCGATCTCGTCGA GCAGCAGCAC GCA GTGCGGCTGC TTGGTGATGGCCTCG clpS 2642336 - 2641974 - | ATP-dependent Clp protease adaptor protein ClpS Pmen_2395 2642568 - 2642837 + | cold-shock DNA-binding protein family protein TERM 1934 2642882 - 2642863 - T 100 -15 -4.25848 | opp_overlap 2642863 AAGTCGCCATGAAAA GGCCGGTC ATGT GACCGGCC TTTTTTTCACGCTCT TERM 1935 2642863 - 2642882 + T 100 -15 -5.42862 | opp_overlap 2642863 AAGTCGCCATGAAAA GGCCGGTC ATGT GACCGGCC TTTTTTTCACGCTCT Pmen_2396 2644169 - 2642913 - | isocitrate dehydrogenase (NADP) Pmen_2397 2644531 - 2646759 + | isocitrate dehydrogenase, NADP-dependent TERM 1936 2646803 - 2646779 - f 93 -17.2 -3.31144 | opp_overlap 2646779, overlap 2646782 GCTTGAGTGTCAGAA GAACCCCGGC CTGGT GCCGGGGTTC TTTATTTATGGATAC TERM 1937 2646779 - 2646803 + F 100 -17.2 -4.57482 | opp_overlap 2646779 2646782 GCTTGAGTGTCAGAA GAACCCCGGC CTGGT GCCGGGGTTC TTTATTTATGGATAC TERM 1938 2646800 - 2646782 - f 85 -13.1 -3.79906 | opp_overlap 2646779, overlap 2646779 TGAGTGTCAGAAGAA CCCCGGC CTGGT GCCGGGG TTCTTTATTTATGGA TERM 1939 2646888 - 2646873 - g 72 -5.4 -4.39571 | CGGAGAAAGCGAAAA TGGAGT GGCA ACCCCA TATCACCGTGGCCAC TERM 1940 2646903 - 2646924 + G 78 -6.5 -4.70583 | opp_overlap 2646894, overlap 2646911 ATATCACCGTGGCCA CGGTGATCG AAGA CGATGGCCG TTTTCTGTTCGTCGA Pmen_2398 2646872 - 2647312 + | NUDIX hydrolase TERM 1941 2648161 - 2648110 - g 70 -13.1 -2.95942 | gap 2, opp_overlap 2648127, overlap 2648107 2648115 GTGATATCGAAACCA CCGAAGGTCAGGT-CATC-GGCCGT CATC ACGGCCTGATGTACCACACCATCGG CCAGCGCCAGGGCCT trmU 2647440 - 2648552 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Pmen_2400 2648549 - 2649169 + | hypothetical protein Pmen_2401 2649172 - 2650035 + | hypothetical protein Pmen_2402 2650184 - 2651554 + | adenylosuccinate lyase TERM 1942 2651568 - 2651598 + F 100 -17.6 -4.28651 | opp_overlap 2651564, overlap 2651574 GAGCGACACCAGCCT CGAGGACGCCCGGC TGA GCCGGGCGTTTTTG TTTTAAGGTTTTCAT TERM 1943 2651574 - 2651592 + F 100 -17.4 -5.46706 | opp_overlap 2651564, overlap 2651568 CACCAGCCTCGAGGA CGCCCGGC TGA GCCGGGCG TTTTTGTTTTAAGGT TERM 1944 2651777 - 2651748 - g 77 -13.5 -3.57144 | TTCCCGACTTCGAAA GCCCGATCAGCCC GGAC GAGCTGGCCGGGC TGGCGCTGGAAGAGG Pmen_2403 2651633 - 2652799 + | cupin 4 family protein Pmen_2404 2652792 - 2653217 + | GCN5-related N-acetyltransferase Pmen_2405 2653226 - 2653867 + | hypothetical protein Pmen_2406 2653864 - 2654673 + | NolW domain-containing protein Pmen_2407 2655232 - 2656827 + | isocitrate lyase TERM 1945 2656838 - 2656866 + F 78 -10.3 -3.9693 | overlap 2656839 ACTAAGAACGGTTCC CCTGCTGCGGA CCACGCA TCCGCAGCAGC TTGTTTGCCTAACTA TERM 1946 2656839 - 2656865 + F 75 -13.8 -2.97676 | overlap 2656838 CTAAGAACGGTTCCC CTGCTGCGGA CCACGCA TCCGCAGCAG CTTGTTTGCCTAACT TERM 1947 2656882 - 2656900 + F 100 -17.4 -5.60993 | opp_overlap 2656882, overlap 2656893 TTGTTTGCCTAACTA GCCCCGGC ACT GCCGGGGC TTTTTTTATCCCCCG TERM 1948 2656900 - 2656882 - f 84 -17.4 -2.70932 | opp_overlap 2656882 2656893 TTGTTTGCCTAACTA GCCCCGGC ACT GCCGGGGC TTTTTTTATCCCCCG Pmen_2408 2657116 - 2659119 + | hypothetical protein Pmen_2409 2659248 - 2659886 + | hypothetical protein Pmen_2410 2660426 - 2659905 - | hypothetical protein TERM 1949 2660480 - 2660456 - R 100 -15.7 -4.57341 | AATGCTGCTGAAAAA GGGGCGCGG TCTGGCG CCGCGCCCC TGCGTACCATCAGAG Pmen_2411 2661893 - 2660490 - | hypothetical protein TERM 1950 2660995 - 2660953 - G 79 -11.8 -3.86346 | overlap 2660954 TCAGTGCTGGAGAAA CCCGGCAGGCGCGCCTGCAG ATA CTGCAGCGGCCCCTGCGCGG CATCCAGCCCCCAGG TERM 1951 2660995 - 2660954 - G 73 -15.1 -2.91593 | gap 1, overlap 2660953 CAGTGCTGGAGAAAC CCG-GCAGGCGCGCCTGCAG ATA CTGCAGCGGCCCCTGCGCGG CATCCAGCCCCCAGG TERM 1952 2662689 - 2662699 + G 72 -6.8 -4.2679 | overlap 2662686 CTGGGTCGGCCTGGT CGGT GCT ACCG TTTTCATAACCATTC Pmen_2412 2662393 - 2662806 + | NADH dehydrogenase subunit A Pmen_2413 2662817 - 2663494 + | NADH dehydrogenase subunit B Pmen_2414 2663557 - 2665338 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D Pmen_2415 2665340 - 2665852 + | NADH dehydrogenase subunit E Pmen_2416 2665849 - 2667195 + | NADH-quinone oxidoreductase, F subunit TERM 1953 2667674 - 2667664 - g 72 -6.8 -4.2828 | overlap 2667672 GCGCACTCATCAAAA CCAG GAA CTGG GCCCGTTCATCGCCC Pmen_2417 2667254 - 2669962 + | NADH dehydrogenase subunit G Pmen_2418 2669959 - 2670951 + | NADH dehydrogenase subunit H Pmen_2419 2670965 - 2671513 + | NADH dehydrogenase subunit I Pmen_2420 2671581 - 2672090 + | NADH dehydrogenase subunit J Pmen_2421 2672087 - 2672395 + | NADH dehydrogenase subunit K TERM 1954 2672643 - 2672684 + G 76 -6.5 -4.4648 | gap 1, overlap 2672648 CACCCTGTATCTCGA CGGACTGTCGCTGACCATGC TGG GCGTGGTCACCGGC-GTGGG TTTTCTGATCCACCT Pmen_2422 2672392 - 2674242 + | NADH dehydrogenase subunit L TERM 1955 2675125 - 2675141 + G 72 -13.7 -3.0497 | GGAGTTCGCGCCCAT CGCCCAG TGG CTGGGCG TGTTCGCCATCATCT Pmen_2423 2674256 - 2675785 + | NADH dehydrogenase subunit M Pmen_2424 2675789 - 2677273 + | NADH dehydrogenase subunit N TERM 1956 2677299 - 2677281 - T 76 -13.1 -3.36878 | opp_overlap 2677281, overlap 2677246 CGCAGTGACCGACAA GCCCCGC GAAAT GCGGGGC TTTTTTCATCGGCTG TERM 1957 2677281 - 2677299 + T 100 -13.8 -5.15634 | opp_overlap 2677246 2677281 CGCAGTGACCGACAA GCCCCGCG AAA TGCGGGGC TTTTTTCATCGGCTG Pmen_2425 2678145 - 2677384 - | trans-aconitate 2-methyltransferase Pmen_2426 2678449 - 2679456 + | TRAP dicarboxylate transporter, DctP subunit TERM 1958 2679515 - 2679467 - T 100 -13.2 -4.60041 | gap 2, overlap 2679457 2679468 2679469 ACTGATGGCGAAAAA CCGCCACCCTCATGCCGCCGACAG ATG CT-CCGGCGGCA-GAGGCTGGCCA AGCAGGTAGCCCTGC TERM 1959 2679514 - 2679468 - T 86 -14.5 -3.35542 | gap 2, overlap 2679457 2679467 2679469 CTGATGGCGAAAAAC CGCCACCCTCATGCCGCCGACAG ATG CT-CCGGCGGCA-GAGGCTGGCC AAGCAGGTAGCCCTG TERM 1960 2679513 - 2679469 - T 85 -18 -2.61004 | gap 2, overlap 2679457 2679468 2679467 TGATGGCGAAAAACC GCCACCCTCATGCCGCCGACAG ATG CT-CCGGCGGCA-GAGGCTGGC CAAGCAGGTAGCCCT Pmen_2427 2681527 - 2679476 - | diguanylate cyclase/phosphodiesterase TERM 1961 2679662 - 2679640 - G 77 -13.4 -3.56092 | CGACGATGGCCGAAA CGATGGCGGC GTC GTCGCCATCG TGCTCCAGGTCGCGC Pmen_2428 2683203 - 2681674 - | RND efflux system outer membrane lipoprotein TERM 1962 2682881 - 2682853 - G 82 -15.9 -3.48593 | CAGGGTCGGATAGAA GCGCGCCCGCGCG CCA CGCACCAGCGCGC GGGCCTGGCGGTACT TERM 1963 2683174 - 2683188 + g 70 -11.4 -3.37028 | GGAATTGAAGGTTTC GCGAGC AAC GCTCGC TTCTGGGATGTTCAT Pmen_2429 2686304 - 2683200 - | acriflavin resistance protein TERM 1964 2685940 - 2685997 + g 78 -14.9 -3.2326 | gap 3, overlap 2685972 GGCATCGTGCGCATG CCGCTGGGCAGC-AGCTCGCGGGCGGCG TTGAT CGCCGCCTGC-ACCTCGC-GCGCGGCGG TGTTAATGTCCTTGT Pmen_2430 2689518 - 2686426 - | acriflavin resistance protein TERM 1965 2689093 - 2689129 + g 73 -13.1 -3.28712 | gap 1, overlap 2689096 GCTGGACGTCACCGC CAGGGTCAGCACCGGC GTATCG GCCGG-GTTGACCTTG TTGTACACCGGCGGC TERM 1966 2689096 - 2689126 + g 77 -11.2 -3.78934 | gap 1, overlap 2689093 GGACGTCACCGCCAG GGTCAGCACCGGC GTATCG GCCGG-GTTGACC TTGTTGTACACCGGC Pmen_2431 2690822 - 2689515 - | RND family efflux transporter MFP subunit TERM 1967 2690993 - 2691019 + r 70 -3.5 -4.59982 | overlap 2690979 2690997 GTCGTCTGATCTGAC GGGTTTCGCCC CTTAC GGGCGACTCAC TTTCTTTGCTTGTGC TERM 1968 2691072 - 2691088 + r 82 -15.1 -3.1364 | overlap 2691085 CACCCCTGCATACGG CCCCGGC TGC GCCGGGG TTCCCTCCTTCCATC TERM 1969 2691270 - 2691254 - R 71 -5.7 -4.4261 | opp_overlap 2691254 GCTTCAAGAGCAAAA GCCAGAC GCC GCCGGGC TTAATTACGTGGAGA TERM 1970 2691739 - 2691721 - R 100 -16 -5.73339 | opp_overlap 2691723, overlap 2691732 2691735 AGAACCATAAAAAAA CGGCCTGC AAA GCAGGCCG TCTCGGACGCTTGGC Pmen_2432 2692259 - 2691759 - | thiol peroxidase (atypical 2-Cys peroxiredoxin) Pmen_2433 2696115 - 2692435 - | hypothetical protein Pmen_2434 2697839 - 2696112 - | surface antigen (D15) TERM 1971 2696360 - 2696392 + g 71 -14.2 -2.83715 | gap 1, overlap 2696347 GGTAGCGGCCGCCAA CCCTGTCGCCGC-GA TTGT TCTGCGGCGACAGGC TCTGATAGTCGTAGC Pmen_2435 2698551 - 2697907 - | GCN5-related N-acetyltransferase Pmen_2436 2698796 - 2699608 + | exonuclease III Pmen_2437 2699711 - 2701093 + | OmpA/MotB domain-containing protein Pmen_2438 2701271 - 2702260 + | integral membrane protein TerC TERM 1972 2702572 - 2702542 - T 95 -13.2 -4.0641 | opp_overlap 2702543 2702546, overlap 2702543 2702545 GCGCACCGATATAAA CGACGAGGCCCGCA AAA CGCGGGCCTCCTCT TTCCAGGCTGGCGAA TERM 1973 2702571 - 2702543 - T 87 -16.7 -3.03525 | opp_overlap 2702543 2702546, overlap 2702542 2702545 CGCACCGATATAAAC GACGAGGCCCGCA AAA CGCGGGCCTCCTC TTTCCAGGCTGGCGA TERM 1974 2702543 - 2702571 + T 93 -16 -3.55444 | opp_overlap 2702542 2702543 2702545, overlap 2702546 CGCACCGATATAAAC GACGAGGCCCGC AAAAC GCGGGCCTCCTC TTTCCAGGCTGGCGA TERM 1975 2702569 - 2702545 - T 76 -13.5 -3.07132 | opp_overlap 2702543 2702546, overlap 2702543 2702542 CACCGATATAAACGA CGAGGCCCGCA AAA CGCGGGCCTCC TCTTTCCAGGCTGGC TERM 1976 2702546 - 2702568 + T 78 -16.3 -2.61144 | opp_overlap 2702545 2702543 2702542, overlap 2702543 ACCGATATAAACGAC GAGGCCCGC AAAAC GCGGGCCTC CTCTTTCCAGGCTGG Pmen_2439 2703817 - 2702588 - | acyl-CoA dehydrogenase domain-containing protein TERM 1977 2703443 - 2703466 + g 70 -8.8 -3.93638 | opp_overlap 2703448 GCGGATCTCGCCGGA CAGCAGCGGT TCCA GCCACTGCTG TTTCTGCGCTTCGTT Pmen_2440 2703958 - 2704893 + | LysR family transcriptional regulator TERM 1978 2704911 - 2704940 + T 100 -17.9 -3.62597 | opp_overlap 2704914 2704917, overlap 2704914 GCTTGCAGCCGAACG CAAGAAGGCCCGC ATAT GCGGGCCTTCTCG TTGTTGCCGGATCGA TERM 1979 2704914 - 2704937 + T 86 -18.2 -2.93252 | opp_overlap 2704914 2704917, overlap 2704911 TGCAGCCGAACGCAA GAAGGCCCGC ATAT GCGGGCCTTC TCGTTGTTGCCGGAT TERM 1980 2704937 - 2704914 - T 90 -18.2 -3.18274 | opp_overlap 2704914 2704911, overlap 2704917 TGCAGCCGAACGCAA GAAGGCCCGC ATAT GCGGGCCTTC TCGTTGTTGCCGGAT TERM 1981 2704934 - 2704917 - T 91 -14.1 -3.73336 | opp_overlap 2704914 2704911, overlap 2704914 AGCCGAACGCAAGAA GGCCCGC ATAT GCGGGCC TTCTCGTTGTTGCCG Pmen_2441 2705391 - 2704957 - | DoxX family protein Pmen_2442 2706912 - 2705497 - | lytic transglycosylase, catalytic Pmen_2443 2707191 - 2708018 + | Sec-independent protein translocase TatD Pmen_2444 2708105 - 2709574 + | methyl-accepting chemotaxis sensory transducer TERM 1982 2709967 - 2709985 + G 71 -3.1 -4.64861 | gap 1, opp_overlap 2709950, overlap 2709943 CCTGCTGCTGGAGCA GTGCGTGA CCTT TC-CGCGC TTTGTTTTCAGCGGC Pmen_2445 2709677 - 2710039 + | hypothetical protein Pmen_2446 2710856 - 2710041 - | Acyl-CoA thioesterase-like protein TERM 1983 2710677 - 2710629 - G 72 -11.6 -3.53224 | gap 1 CACCTCGGCCTGAAA GCTCACCGGCACCT-CGGCGGCC ACCG GGCCGACGAAGGTGATGGCCAGC GAGCGCACCGGACGC Pmen_2447 2711721 - 2710945 - | CHAD domain-containing protein Pmen_2448 2713783 - 2711798 - | transglutaminase domain-containing protein Pmen_2449 2714736 - 2713780 - | hypothetical protein Pmen_2450 2715653 - 2714736 - | ATPase Pmen_2451 2717716 - 2715749 - | methyl-accepting chemotaxis sensory transducer TERM 1984 2717802 - 2717790 - R 71 -9.1 -3.80858 | overlap 2717782 CGACAAGCCAGCAAA GGCCA GGA TGGCC GGAACAGTTAACTGG Pmen_2452 2718443 - 2717838 - | hypothetical protein Pmen_2453 2718721 - 2718443 - | hypothetical protein Pmen_2454 2719883 - 2718762 - | tRNA 2-selenouridine synthase Pmen_2455 2720917 - 2719883 - | selenophosphate synthetase TERM 1985 2720615 - 2720660 + g 72 -13.3 -3.14344 | gap 1, opp_overlap 2720608 2720609 GCCAAGAATGGCGAT GGCCATCAGCGG-ATCGCCGCC CAT GGCGTAGATGTCGCTGATGGCA TTGGTGGCGGCGATA Pmen_2456 2721020 - 2722030 + | patatin Pmen_2457 2723125 - 2722037 - | hypothetical protein TERM 1986 2723177 - 2723153 - R 79 -14.3 -2.88822 | overlap 2723157 CCTTCGACAGAACGA CAAAGCGCCCA TGA CGGGCGCTCTG AATAACCGATGCACG TERM 1987 2723173 - 2723157 - R 84 -11.5 -4.12397 | overlap 2723153 CGACAGAACGACAAA GCGCCCA TGA CGGGCGC TCTGAATAACCGATG Pmen_2458 2724003 - 2723200 - | hypothetical protein Pmen_2459 2725022 - 2724159 - | alpha/beta hydrolase fold TERM 1988 2724912 - 2724945 + g 70 -13.1 -3.02144 | gap 1 GCTGGCCGCGTTGTC CAGCCAGCCG-TGCAG TGC CAGCAGCGGCTGGCCG TCTTCCGGACCGTAC Pmen_2460 2725822 - 2725019 - | alpha/beta hydrolase fold TERM 1989 2725870 - 2725839 - R 79 -9.4 -4.19238 | gap 1 CGTCGAACTCGAAAA GGCGAATACCCGGAG ATT CTCCGG-CAGCCGCC GACACGCGGCAATGA Pmen_2461 2726554 - 2725922 - | lysine exporter protein LysE/YggA TERM 1990 2726139 - 2726083 - G 79 -16.4 -3.04144 | GGCTCAGGCCGAACA GCAGCGCGGCGCAGGCCACCTTGCCG GGCAG CGACATGTCGGCCGGCACCAGGCTGC TGAGCAGGGCGAGGA Pmen_2462 2727399 - 2726596 - | AraC family transcriptional regulator TERM 1991 2726684 - 2726657 - G 93 -9.9 -4.59511 | overlap 2726674 AACAGCCGGGAAAAA TGCGCCTGG TCATAGAACC CCAGGCGCA GTGCGATCTCGCTCA TERM 1992 2727044 - 2727029 - G 70 -6 -4.25283 | overlap 2727030 ATCGCCGCATGAAAA CGCTGC AGAT GCTGCG ACAGCACGGGATGGC Pmen_2463 2727901 - 2727458 - | thioesterase superfamily protein TERM 1993 2727950 - 2727928 - R 100 -16.2 -4.18018 | overlap 2727930 TGTGCGGAGGGAAAA CAGGGCCGGC GGC GCCGGCCCGG CGCTGCTCAATCGTG TERM 1994 2727948 - 2727930 - R 100 -17.4 -3.69216 | overlap 2727928 TGCGGAGGGAAAACA GGGCCGGC GGC GCCGGCCC GGCGCTGCTCAATCG Pmen_2464 2729624 - 2727957 - | AMP-dependent synthetase and ligase TERM 1995 2728686 - 2728668 - G 70 -11.6 -3.38316 | GTACCAGTTAAGCAA CGCCTCGG GCA CCGGGGCG GCGCCGGACAGCGCA TERM 1996 2729679 - 2729656 - R 85 -15.4 -3.14132 | opp_overlap 2729655 TTGTTTTTGTAGGAA TCGACCAAGC ACTT GCTTGGTCGA CTATTCCACGCAGAC Pmen_2465 2730223 - 2729765 - | phosphohistidine phosphatase, SixA Pmen_2466 2730567 - 2730220 - | hypothetical protein gpsA 2731618 - 2730596 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1997 2733407 - 2733367 - g 88 -16.7 -3.72576 | CGTTCTGCGAGCAAA GCAGGCAGGTGCAGAGCGG CGC CCACCCCGCCCCCGCCAGC GGTGACGGCCAGGCC Pmen_2468 2731890 - 2733785 + | integral membrane sensor hybrid histidine kinase Pmen_2469 2734000 - 2734515 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Pmen_2470 2734527 - 2735747 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 1998 2735765 - 2735794 + T 90 -14.3 -3.57144 | opp_overlap 2735748 2735765 2735771, overlap 2735766 2735771 GCTACGCCGCAGTAA CGAGAACGGCGCC TTCG GGCGCCGTTTTCA TTTGCCGATCAAGGC TERM 1999 2735794 - 2735765 - T 82 -14.3 -3.14931 | opp_overlap 2735765 2735766 2735771, overlap 2735748 2735771 GCTACGCCGCAGTAA CGAGAACGGCGCC TTCG GGCGCCGTTTTCA TTTGCCGATCAAGGC TERM 2000 2735766 - 2735793 + T 86 -17.8 -2.74144 | opp_overlap 2735748 2735765 2735771, overlap 2735765 2735771 CTACGCCGCAGTAAC GAGAACGGCGCC TTCG GGCGCCGTTTTC ATTTGCCGATCAAGG TERM 2001 2735771 - 2735788 + T 100 -14.1 -4.55128 | opp_overlap 2735771 2735765, overlap 2735766 2735765 CCGCAGTAACGAGAA CGGCGCC TTCG GGCGCCG TTTTCATTTGCCGAT TERM 2002 2735788 - 2735771 - T 86 -14.1 -3.54029 | opp_overlap 2735766 2735765 2735771, overlap 2735765 CCGCAGTAACGAGAA CGGCGCC TTCG GGCGCCG TTTTCATTTGCCGAT TERM 2003 2735825 - 2735807 - T 74 -12.4 -3.14564 | TCATTTGCCGATCAA GGCCGCAC CAT ATGCGGCC CTCCACGCGTCGTCA Pmen_2471 2737115 - 2735838 - | methyl-accepting chemotaxis sensory transducer Pmen_2472 2737751 - 2737401 - | hypothetical protein Pmen_2473 2738436 - 2737756 - | protein tyrosine/serine phosphatase TERM 2004 2738405 - 2738389 - G 75 -4.3 -4.58283 | overlap 2738394 CAACGCGCCCAAAAA CACCAGC GAG GCCAGCG CCAGCCGCAGGCCCT Pmen_2474 2739158 - 2738433 - | phosphoesterase, PA-phosphatase related TERM 2005 2738732 - 2738694 - G 73 -12.3 -3.37796 | gap 1, overlap 2738679 2738676 TGCCAGCAGCGAGAA CCCCGCCGAGGCATGGCC GCCC GGCCA-GCAGCGGCCGGG ATTGGCGGTCGGTGC Pmen_2475 2741126 - 2739168 - | sulfatase TERM 2006 2741081 - 2741063 - G 100 -8.8 -5.52384 | GGGTGAGGAAAAAAA CTGCCAGC CAG GCCAGCAG AATGATCGACAGATA Pmen_2476 2741230 - 2741913 + | two component transcriptional regulator Pmen_2477 2741903 - 2743171 + | integral membrane sensor signal transduction histidine kinase Pmen_2478 2743253 - 2743942 + | methyltransferase type 11 TERM 2007 2744522 - 2744497 - g 100 -14 -4.38712 | opp_overlap 2744507 TGGATCTGGAGAAAA GCCGGCGACG TTGGCG CGTCGCCAGC GCCTCGCGCCGCGAC Pmen_2479 2743944 - 2744648 + | lipopolysaccharide kinase TERM 2008 2744992 - 2745026 + G 73 -10.8 -3.72576 | gap 1, opp_overlap 2744964 2744962, overlap 2744994 GCAGATGGTCGCGCT GC-TGATGATCGCCC TGACCT GGGCGATCATCCTGC TTTGATCAGCGCACC Pmen_2480 2744645 - 2745031 + | diacylglycerol kinase Pmen_2481 2745496 - 2745032 - | hypothetical protein Pmen_2482 2746573 - 2745563 - | amidohydrolase 2 Pmen_2483 2746806 - 2748200 + | methyl-accepting chemotaxis sensory transducer TERM 2009 2748540 - 2748489 - g 72 -15 -2.79183 | TCGAGCGTGACGACA GCGAGGAGCGCCAGGGCAACTACC GTCT GGTCGTCGACCTGGCGCTCCAGGG GCCACTGGACGAGGC Pmen_2484 2748260 - 2748661 + | OsmC family protein TERM 2010 2748648 - 2748636 - f 78 -10.5 -3.93136 | ACATCCAGGTAGAAA CCCGC CTG GCGGG AGCCCCGGCATGAGC TERM 2011 2749378 - 2749328 - g 89 -17.5 -3.54424 | gap 1, overlap 2749304 TCCCAGCGGGTGAAA CGCCACTGCTCAGCGCC-TGCGGC GAAT GCCACCTGGCGCTGATCGGCGGCG AACCCATCGGCCCAC Pmen_2485 2748658 - 2749518 + | pirin domain-containing protein TERM 2012 2749553 - 2749534 - f 80 -15 -3.10975 | overlap 2749536 ACCGACCATCGAACA CAGGCGCC AGGC GGCGCCTG TCACAGCAAAGGACT Pmen_2486 2749575 - 2750387 + | hypothetical protein TERM 2013 2750565 - 2750518 - g 83 -13.5 -3.78953 | gap 2, opp_overlap 2750551 ACTTCGATTACGAAA GCACCCTGGAAGCCTGCGCGCGT GGCG ACGAGCGC-GCCTTCCAGG-CGC TCTATCGGCAGGAGG Pmen_2487 2750490 - 2751038 + | ECF subfamily RNA polymerase sigma-24 factor Pmen_2488 2751035 - 2751748 + | hypothetical protein TERM 2014 2751783 - 2751749 - f 78 -16.5 -2.53263 | gap 1, opp_overlap 2751744 2751743 GCCAGCGCCAATTGA TAGCG-CTTGCCGGCC GCTC GGCCGGCAAGCCGCTT GAAAAATTTTCAGCC Pmen_2489 2751913 - 2752692 + | hypothetical protein TERM 2015 2752726 - 2752704 - T 100 -17 -5.1861 | opp_overlap 2752704 GTGAGCATGAAAAAA GGCTGCGCCC GAT GAGCGCAGCC TTTCGTTCAGACCTT TERM 2016 2752704 - 2752726 + T 93 -14.8 -3.90856 | opp_overlap 2752704 GTGAGCATGAAAAAA GGCTGCGCCC GAT GAGCGCAGCC TTTCGTTCAGACCTT Pmen_2490 2753545 - 2752757 - | dienelactone hydrolase TERM 2017 2753766 - 2753781 + r 95 -11.8 -4.4767 | opp_overlap 2753766 GGAGCCATAAAAAAA GCCCGC CGAA GCGGGC TTTTCTACTGCGTGG TERM 2018 2753781 - 2753766 - R 100 -11.8 -5.64274 | opp_overlap 2753766 GGAGCCATAAAAAAA GCCCGC CGAA GCGGGC TTTTCTACTGCGTGG Pmen_2491 2755705 - 2753801 - | heat shock protein 90 Pmen_2492 2757037 - 2755790 - | hypothetical protein Pmen_2493 2757535 - 2757089 - | thioesterase superfamily protein Pmen_2494 2758011 - 2757532 - | thioesterase superfamily protein TERM 2019 2757986 - 2757976 - G 81 -8.2 -4.56367 | CAGGGCAGAAAGAAA GCGC TGG GCGC GCTCGAGGATGGTGT Pmen_2495 2758195 - 2758455 + | hypothetical protein TERM 2020 2758506 - 2758476 - T 100 -22.7 -3.75169 | opp_overlap 2758482 CAGCACCCGAGCAAA CGACAAGGCCCGC CTAGC GCGGGCCTTGTCG CATCATAGCGCCGGG TERM 2021 2758482 - 2758500 + T 76 -13.1 -3.34043 | opp_overlap 2758476 CCGAGCAAACGACAA GGCCCGC CTAGC GCGGGCC TTGTCGCATCATAGC Pmen_2496 2758901 - 2758509 - | membrane protein-like protein Pmen_2497 2759632 - 2758898 - | hypothetical protein TERM 2022 2759715 - 2759697 - R 100 -13.1 -5.24129 | opp_overlap 2759697 GGGGTCGATAAAAAA GGCCGCC TTGTG GGCGGCC TTTGTGTTGGAAGCG TERM 2023 2759697 - 2759715 + r 100 -13.8 -4.1891 | opp_overlap 2759697 GGGGTCGATAAAAAA GGCCGCCT TGT GGGCGGCC TTTGTGTTGGAAGCG Pmen_2498 2761048 - 2759735 - | branched-chain amino acid transport system II carrier protein TERM 2024 2760962 - 2760911 - G 84 -14.4 -3.96148 | gap 2, opp_overlap 2760913 TCCGGTCAGGAGAAA GCCCAGTGC-CGCC-GGCAGCAGG TTATCC CCCGCCGCCAGGCCCGCGCTGGGC GGGAAGATGATGTTG TERM 2025 2761212 - 2761202 - R 76 -6.8 -4.4773 | overlap 2761203 GGATACTAACGAAAA CTGC CAG GCAG CAGCACAGTTGGCGG TERM 2026 2761299 - 2761311 + r 73 -10.5 -3.64198 | GGCAGCAACTGCCCT GCCCG CCC CGGGC TTCTGTATATGAAGC TERM 2027 2761403 - 2761389 - R 71 -9.2 -3.71794 | ATGGAACCAGGGAAA CGCAGG GGT CCCGCG CAGACTCTGCCCTCC TERM 2028 2761509 - 2761480 - R 100 -19.5 -3.6502 | opp_overlap 2761486, overlap 2761486 TACTCTGCAGGCAAA CAAAAAGGCCACC CGAA GGTGGCCTTTTTG CGAGGGTCAGAAACG TERM 2029 2761486 - 2761503 + r 100 -12.7 -4.57569 | opp_overlap 2761480 2761486 GCAGGCAAACAAAAA GGCCACC CGAA GGTGGCC TTTTTGCGAGGGTCA TERM 2030 2761503 - 2761486 - R 100 -12.7 -5.30616 | opp_overlap 2761486, overlap 2761480 GCAGGCAAACAAAAA GGCCACC CGAA GGTGGCC TTTTTGCGAGGGTCA Pmen_2499 2762413 - 2761526 - | succinyl-CoA synthetase subunit alpha sucC 2763579 - 2762413 - | succinyl-CoA synthetase subunit beta TERM 2031 2763790 - 2763810 + r 81 -14 -3.33261 | opp_overlap 2763786 CTTACAACAATTTGC GTGGCCGC ACGAG GCGGCCAC TTGTGACGCTTAGCG Pmen_2501 2765256 - 2763820 - | dihydrolipoamide dehydrogenase TERM 2032 2765307 - 2765279 - R 95 -12.4 -4.15044 | gap 1, overlap 2765280 TCCTTCTCGAATAAA CCGGACGGCCCTG TGAA CAGGGCCG-CCGT GGAGGAGACTGGCTT TERM 2033 2765306 - 2765280 - R 83 -15.9 -3.08812 | gap 1, overlap 2765279 CCTTCTCGAATAAAC CGGACGGCCCTG TGAA CAGGGCCG-CCG TGGAGGAGACTGGCT Pmen_2502 2766555 - 2765323 - | dihydrolipoamide acetyltransferase kgd 2769452 - 2766621 - | alpha-ketoglutarate decarboxylase TERM 2034 2769607 - 2769641 + r 77 -8.4 -4.30978 | overlap 2769611 CGTCATATTTTTCGA GTATGAGCCGCGGCTT TGT GGGCTGCGGCTCTGGC TTTTGCTGCATTACC TERM 2035 2769611 - 2769637 + r 77 -14.4 -2.78049 | overlap 2769607 ATATTTTTCGAGTAT GAGCCGCGGCTT TGT GGGCTGCGGCTC TGGCTTTTGCTGCAT sdhB 2770410 - 2769703 - | succinate dehydrogenase iron-sulfur subunit TERM 2036 2769833 - 2769813 - G 70 -13.3 -3.05844 | opp_overlap 2769822, overlap 2769824 CGCGGCAGCGGAACA CGCTGAACG GAT CGTCCAGCG AAGCCAGACGCTCGG sdhA 2772194 - 2770422 - | succinate dehydrogenase flavoprotein subunit Pmen_2506 2772566 - 2772198 - | succinate dehydrogenase subunit D TERM 2037 2772252 - 2772234 - G 73 -13.2 -3.2614 | CACGCCCCAGACGAA CATCGCGA ACA TCGCGATG CCGCACACGGCCTGG Pmen_2507 2772946 - 2772560 - | succinate dehydrogenase subunit C gltA 2773266 - 2774576 + | type II citrate synthase TERM 2038 2774592 - 2774623 + T 100 -17.4 -3.61356 | opp_overlap 2774599, overlap 2774599 GATCCTCGCGCACTA CGCAAAAGGCTGCC AACT GGCAGCCTTTTTCG TTTGCGCTCGATGAT TERM 2039 2774599 - 2774616 + T 100 -12.7 -4.99134 | opp_overlap 2774599, overlap 2774592 GCGCACTACGCAAAA GGCTGCC AACT GGCAGCC TTTTTCGTTTGCGCT TERM 2040 2774616 - 2774599 - T 95 -12.7 -4.21194 | opp_overlap 2774599 2774592 GCGCACTACGCAAAA GGCTGCC AACT GGCAGCC TTTTTCGTTTGCGCT Pmen_2509 2775264 - 2774659 - | lipid-binding START domain-containing protein Pmen_2510 2775577 - 2775326 - | hypothetical protein Pmen_2511 2776523 - 2775651 - | 6-phosphogluconate dehydrogenase, NAD-binding Pmen_2512 2776756 - 2777304 + | exonuclease, RNase T and DNA polymerase III TERM 2041 2777338 - 2777317 - f 88 -2.8 -5.55664 | opp_overlap 2777324 TGATGACGAAAAAAA GGCGCTTG GGCATA CTGGCGCC CCCTTTTGTAACCCT Pmen_2513 2777370 - 2777651 + | hypothetical protein TERM 2042 2777689 - 2777673 - f 73 -10.8 -3.61398 | opp_overlap 2777673, overlap 2777657 GCGCGCTCCGAAGAA CCGGCC CTCGC GGCCGG TTTTTTCTTTGATCC TERM 2043 2777673 - 2777689 + F 100 -10.8 -5.68438 | opp_overlap 2777657 2777673 GCGCGCTCCGAAGAA CCGGCC CTCGC GGCCGG TTTTTTCTTTGATCC TERM 2044 2778280 - 2778313 + G 74 -15.3 -2.5474 | gap 1, overlap 2778279 2778276 CGCCGCACTGCTGGT GCTGCCCATCGGCCTG TGG CAGGCCGGAGG-CAGC CTGTTCTCGGTCGAC Pmen_2514 2777723 - 2778574 + | hypothetical protein Pmen_2515 2780334 - 2778571 - | lipid ABC transporter ATPase/inner membrane protein Pmen_2516 2780750 - 2780343 - | DoxX family protein TERM 2045 2780782 - 2780758 - R 70 -4.1 -4.67353 | TCAGTCATGCAAAAA GCGCTCGGC GTGGTCG GCCGTGGGC AGCAGGCAGACGGCA Pmen_2517 2781177 - 2780743 - | putative thiol-disulphide oxidoreductase DCC Pmen_2518 2781764 - 2781174 - | hypothetical protein Pmen_2519 2782889 - 2781774 - | ATP-NAD/AcoX kinase Pmen_2520 2783196 - 2783375 + | hypothetical protein TERM 2046 2783381 - 2783412 + T 90 -18.1 -3.18264 | gap 1, opp_overlap 2783398, overlap 2783381 GCAGGGCTGAACCTT GG-GCGCCAGGCAC GCAAG GTGCCTGGCGCGCC TTGGTCAATCCCGCG TERM 2047 2783381 - 2783411 + T 85 -18.3 -2.50816 | opp_overlap 2783398, overlap 2783381 GCAGGGCTGAACCTT GGGCGCCAGGCAC GCAAG GTGCCTGGCGCGC CTTGGTCAATCCCGC Pmen_2521 2783812 - 2783417 - | methionine sulfoxide reductase B Pmen_2522 2784103 - 2785314 + | aminotransferase AlaT Pmen_2523 2785321 - 2785773 + | hypothetical protein TERM 2048 2786560 - 2786534 - g 84 -17.2 -3.16742 | TTCAAGGCCGACGAA GCCGGCGCCCGC CTG GCCGGCACCGGC GCGATGATCGCCGCG Pmen_2524 2785862 - 2786734 + | heat shock protein HtpX TERM 2049 2786775 - 2786748 - T 100 -18.6 -4.03978 | opp_overlap 2786748 2786753, overlap 2786753 AATCGTCCACACAAA GAAAAGGCGACC TTCG GGTCGCCTTTTC TGTGCTCGGGGCAAA TERM 2050 2786748 - 2786775 + T 86 -18.6 -2.78384 | opp_overlap 2786748 2786753, overlap 2786753 AATCGTCCACACAAA GAAAAGGCGACC TTCG GGTCGCCTTTTC TGTGCTCGGGGCAAA TERM 2051 2786770 - 2786753 - T 100 -12.7 -5.05113 | opp_overlap 2786748 2786753, overlap 2786748 TCCACACAAAGAAAA GGCGACC TTCG GGTCGCC TTTTCTGTGCTCGGG TERM 2052 2786753 - 2786770 + T 100 -12.7 -4.57353 | opp_overlap 2786753 2786748, overlap 2786748 TCCACACAAAGAAAA GGCGACC TTCG GGTCGCC TTTTCTGTGCTCGGG Pmen_2525 2787522 - 2786863 - | thiopurine S-methyltransferase Pmen_2526 2787626 - 2788393 + | extradiol ring-cleavage dioxygenase III subunit B Pmen_2527 2788974 - 2788390 - | TetR family transcriptional regulator Pmen_2528 2789079 - 2789516 + | hypothetical protein TERM 2053 2789548 - 2789519 - T 100 -18.7 -3.55761 | gap 1 CAGCCAGGCCTGAAA CGACGAGGCCCGTC ATT GACGGGCCTC-TCG CTCAATCCAGCCGCA Pmen_2529 2790539 - 2789550 - | alcohol dehydrogenase Pmen_2530 2791651 - 2790632 - | putative periplasmic protease Pmen_2531 2791850 - 2792548 + | phosphoglycerate mutase Pmen_2532 2792607 - 2792918 + | sterol-binding domain-containing protein TERM 2054 2792968 - 2792949 - T 100 -13.6 -4.3586 | opp_overlap 2792949 TGATGCAGACGAAAA CCGGAGTC CCTG GACTCCGG TTTTTTTATGGGCGC TERM 2055 2792949 - 2792968 + T 100 -13.6 -5.60993 | opp_overlap 2792949 TGATGCAGACGAAAA CCGGAGTC CCTG GACTCCGG TTTTTTTATGGGCGC Pmen_2533 2794152 - 2793010 - | hypothetical protein Pmen_2534 2795746 - 2794157 - | membrane protein involved in aromatic hydrocarbon degradation Pmen_2535 2796766 - 2795765 - | hypothetical protein Pmen_2536 2797566 - 2796805 - | peptidase C39, bacteriocin processing TERM 2056 2797631 - 2797595 - R 78 -15.8 -2.5955 | opp_overlap 2797601, overlap 2797591 ACTGCGTACAACGGA GCAGGAGCCCGGCCGC AGCCG GCGGCAAGGCTCCTGT GGATCAGGTCAGGCG Pmen_2537 2798073 - 2797651 - | hypothetical protein Pmen_2538 2801037 - 2798314 - | regulatory protein, LuxR TERM 2057 2800315 - 2800276 - G 83 -14.3 -3.86015 | gap 2 CAGCCCGGCGAGAAA GGCGGCGCGGTCACGCTGC CGCG GCAGCGC--CAGCGCCGCC AGGTGCAGCGCGGTG Pmen_2539 2803748 - 2801034 - | regulatory protein, LuxR TERM 2058 2801074 - 2801100 + g 73 -5.9 -4.30809 | gap 1 CGGGCGCGGCGGATG GCTTGA-GTGCG ATTA CGCACCTTGAGC TTTTCGTAGATGTTG Pmen_2540 2803864 - 2805264 + | aminodeoxychorismate synthase, subunit I Pmen_2541 2806495 - 2805332 - | fatty acid desaturase TERM 2059 2805821 - 2805860 + g 74 -9.8 -3.83568 | gap 1, opp_overlap 2805835 GCGCAGCAGCGCGTT GCGCCAGCCGAACA-GGGC ATG GCCCTTGCGCTGCAGGCGC TTCTTCTCGATCTGC Pmen_2542 2807569 - 2806535 - | oxidoreductase FAD/NAD(P)-binding subunit Pmen_2543 2807720 - 2808730 + | AraC family transcriptional regulator TERM 2060 2808769 - 2808751 - T 74 -11.8 -3.55761 | opp_overlap 2808730 GATTTATCCGCGAAA TTCGCGAT GAA ATCGCGAA TAAAGCGGAACACCG TERM 2061 2808785 - 2808774 - T 71 -7.2 -4.19371 | opp_overlap 2808730 GAAATCGCGAATAAA GCGG AACA CCGC CCGTTCGCTCCTACA Pmen_2544 2809413 - 2808796 - | phosphoserine phosphatase Pmen_2545 2809590 - 2810210 + | phosphoadenylylsulfate reductase (thioredoxin) TERM 2062 2810221 - 2810264 + T 100 -21.2 -3.61268 | opp_overlap 2810227 2810232, overlap 2810227 2810232 ACTGATCATCGGTGA CTGAAACGAAACATGGCGCC CTTG GGCGCCATGTTTCGTTATGG TTTGCAGCTTCAGTG TERM 2063 2810227 - 2810258 + T 100 -23.2 -3.60419 | opp_overlap 2810227 2810232, overlap 2810221 2810232 CATCGGTGACTGAAA CGAAACATGGCGCC CTTG GGCGCCATGTTTCG TTATGGTTTGCAGCT TERM 2064 2810258 - 2810227 - T 100 -23.2 -3.6502 | opp_overlap 2810227 2810221 2810232, overlap 2810232 CATCGGTGACTGAAA CGAAACATGGCGCC CTTG GGCGCCATGTTTCG TTATGGTTTGCAGCT TERM 2065 2810253 - 2810232 - T 100 -15.9 -4.08485 | opp_overlap 2810232 2810227 2810221, overlap 2810227 GTGACTGAAACGAAA CATGGCGCC CTTG GGCGCCATG TTTCGTTATGGTTTG TERM 2066 2810232 - 2810253 + T 100 -15.9 -4.05902 | opp_overlap 2810227 2810232, overlap 2810227 2810221 GTGACTGAAACGAAA CATGGCGCC CTTG GGCGCCATG TTTCGTTATGGTTTG cysB 2811248 - 2810274 - | transcriptional regulator CysB Pmen_2547 2811854 - 2811354 - | UspA domain-containing protein Pmen_2548 2812940 - 2812035 - | 5'-nucleotidase Pmen_2549 2813896 - 2812943 - | 2-dehydropantoate 2-reductase Pmen_2550 2814222 - 2813896 - | hypothetical protein Pmen_2551 2814281 - 2814694 + | type IV pilus assembly PilZ TERM 2067 2815639 - 2815627 - g 72 -4.7 -4.48221 | overlap 2815628 CAGGAACTGACAAAA GCCGG CAT CCGCC CGAACATCATGGTCG Pmen_2552 2814844 - 2815932 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2068 2815978 - 2815948 - T 91 -19.8 -3.14931 | opp_overlap 2815954, overlap 2815954 TCCAGGCGGCACCAA TGAAAACGCCGGGC AAT GCCCGGCGTTTTCG TATCCGCGCTCAACT TERM 2069 2815954 - 2815972 + T 100 -17.4 -4.34402 | opp_overlap 2815954 2815948 CGGCACCAATGAAAA CGCCGGGC AAT GCCCGGCG TTTTCGTATCCGCGC TERM 2070 2815972 - 2815954 - T 100 -17.4 -4.45544 | opp_overlap 2815954, overlap 2815948 CGGCACCAATGAAAA CGCCGGGC AAT GCCCGGCG TTTTCGTATCCGCGC Pmen_2553 2816331 - 2816047 - | acetyltransferase-like protein Pmen_2554 2817846 - 2816473 - | citrate transporter TERM 2071 2818065 - 2818091 + H 78 -4.5 -4.83169 | gap 1, overlap 2818067 GTAGTATGTATGCCG GCTAATTTCCCG CAGT TGGGGAATT-GC TTTTTATGGAAAACT Pmen_2555 2818126 - 2818377 + | hypothetical protein TERM 2072 2818400 - 2818423 + T 100 -19.6 -5.626 | opp_overlap 2818400 CTCGGCTTCTCGAAA GCCGCCCCAG GTAA CTGGGGCGGC TTTTTTTATCGCCTG TERM 2073 2818423 - 2818400 - T 100 -19.6 -3.53012 | opp_overlap 2818400 CTCGGCTTCTCGAAA GCCGCCCCAG GTAA CTGGGGCGGC TTTTTTTATCGCCTG TERM 2074 2818484 - 2818513 + T 70 -9.9 -3.53012 | opp_overlap 2818486, overlap 2818486 CTATCGCGCAATAAA AAGCCCGCCGGCA CAAG TGTGGGCGGGCTG TTTACCGGCGGCGAG TERM 2075 2818511 - 2818486 - T 100 -10.3 -5.06816 | opp_overlap 2818484 2818486 ATCGCGCAATAAAAA GCCCGCCGGCA CAAG TGTGGGCGGGC TGTTTACCGGCGGCG TERM 2076 2818486 - 2818511 + T 76 -12.5 -3.34398 | opp_overlap 2818486, overlap 2818484 ATCGCGCAATAAAAA GCCCGCCGGCA CAAG TGTGGGCGGGC TGTTTACCGGCGGCG Pmen_2556 2819485 - 2818529 - | ErfK/YbiS/YcfS/YnhG family protein Pmen_2557 2819837 - 2819556 - | hypothetical protein Pmen_2558 2820499 - 2819894 - | lysophospholipase Pmen_2559 2820510 - 2821193 + | ABC transporter related TERM 2077 2822365 - 2822418 + G 71 -9.4 -3.81951 | gap 1, overlap 2822366 GCGCCGCGACATGCT GCCGGTGCCGGTCAGCTCCTGGCTG GTGTA CGGCGCGGCGCTG-CTGGCACTGGG TTTGATCATGTGGCG Pmen_2560 2821193 - 2823697 + | hypothetical protein Pmen_2561 2823752 - 2824249 + | transcription elongation factor GreB Pmen_2562 2824658 - 2824350 - | hypothetical protein Pmen_2563 2824851 - 2825396 + | 2'-5' RNA ligase Pmen_2564 2825589 - 2826542 + | triacylglycerol lipase TERM 2078 2826612 - 2826643 + F 100 -18.8 -4.16016 | GCACCCTACAGCCCC GCTTCGGATCGGGA GCAA TCCCGATCCGACGC TTTATTGGAACCTGC TERM 2079 2827630 - 2827581 - g 81 -12.2 -3.87075 | gap 3, overlap 2827558 AGCAGCGGCGACAAA CGCGC-CGC-CATCGAGGCGCT-GG CCG CCGAGCGCTTCGACGAGCGCGAGCG TCTGCGCCTGGATGC Pmen_2565 2826660 - 2827679 + | lipase chaperone Pmen_2566 2828703 - 2827684 - | periplasmic binding protein/LacI transcriptional regulator TERM 2080 2828747 - 2828719 - R 80 -10.9 -3.72695 | opp_overlap 2828706, overlap 2828721 AGCGCCTCCAGGAAA GACCAGGCCGCGA TTC TAGCAGCCTGGAC GACGAATAAAGCGCG TERM 2081 2828745 - 2828721 - R 79 -12.1 -3.44848 | opp_overlap 2828706, overlap 2828719 CGCCTCCAGGAAAGA CCAGGCCGCGA TTC TAGCAGCCTGG ACGACGAATAAAGCG TERM 2082 2828770 - 2828758 - R 71 -6.9 -4.2704 | TGGACGACGAATAAA GCGCG GGG CACGC CGCCCGGGGTGACGC Pmen_2567 2829840 - 2828827 - | TRAP dicarboxylate transporter, DctP subunit TERM 2083 2829889 - 2829870 - R 84 -10.6 -4.15222 | overlap 2829871 ATTGTTGTGAAGAAA GCCGGCGC ACCC GCGCCGGT GGGGCAACTCAGCGC TERM 2084 2829888 - 2829871 - R 76 -14.1 -3.08812 | overlap 2829870 TTGTTGTGAAGAAAG CCGGCGC ACCC GCGCCGG TGGGGCAACTCAGCG Pmen_2568 2831175 - 2829898 - | TRAP dicarboxylate transporter, DctM subunit Pmen_2569 2832346 - 2831225 - | carbohydrate kinase TERM 2085 2831860 - 2831910 + g 70 -11.2 -3.55444 | gap 3, opp_overlap 2831892 GCTCCAGCAGCGACT CG-CGGCTGTCG-GCCGCAT-TCAG CACG CAGACATGCGGCTCGCCGGCCGGCG TTTCGAGGGTGGCGA TERM 2086 2834570 - 2834590 + G 86 -18.3 -2.87211 | opp_overlap 2834526 GGCCGCTATTACGAG CCAGGCCCG GAG CGGGCCTGG TATGTCGGCGCAGGT Pmen_2570 2832542 - 2834626 + | TonB-dependent receptor TERM 2087 2834748 - 2834717 - T 100 -19.6 -3.93638 | opp_overlap 2834720 2834724, overlap 2834720 2834724 AATGAACCCGATAAA CAACAAAGGCCGCT ATCA AGCGGCCTTTGTCG TGTGGCGCGGAGCTT TERM 2088 2834745 - 2834720 - T 100 -17.7 -4.08948 | opp_overlap 2834720 2834724, overlap 2834717 2834724 GAACCCGATAAACAA CAAAGGCCGCT ATCA AGCGGCCTTTG TCGTGTGGCGCGGAG TERM 2089 2834720 - 2834745 + T 85 -17.7 -2.62184 | opp_overlap 2834717 2834720 2834724, overlap 2834724 GAACCCGATAAACAA CAAAGGCCGCT ATCA AGCGGCCTTTG TCGTGTGGCGCGGAG TERM 2090 2834724 - 2834741 + T 89 -12.7 -4.0162 | opp_overlap 2834720 2834717 2834724, overlap 2834720 CCGATAAACAACAAA GGCCGCT ATCA AGCGGCC TTTGTCGTGTGGCGC TERM 2091 2834741 - 2834724 - T 100 -12.7 -4.63048 | opp_overlap 2834724 2834720, overlap 2834720 2834717 CCGATAAACAACAAA GGCCGCT ATCA AGCGGCC TTTGTCGTGTGGCGC cysS 2836147 - 2834762 - | cysteinyl-tRNA synthetase Pmen_2572 2837815 - 2836148 - | glutaminyl-tRNA synthetase Pmen_2573 2837942 - 2838472 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2092 2838509 - 2838544 + G 88 -9.8 -4.36914 | gap 1, opp_overlap 2838512 2838516, overlap 2838510 2838512 2838516 CGATCTGCACCTCGA AG-AGAAACGCCCGG ACATCAC CCGGGCGTTTCTGCA TTTTCTCGCCACCCG TERM 2093 2838510 - 2838543 + G 73 -13.3 -3.21934 | gap 1, opp_overlap 2838512 2838516, overlap 2838509 2838512 2838516 GATCTGCACCTCGAA G-AGAAACGCCCGG ACATCAC CCGGGCGTTTCTGC ATTTTCTCGCCACCC TERM 2094 2838512 - 2838540 + G 77 -16.1 -2.80077 | opp_overlap 2838512 2838516, overlap 2838510 2838509 2838516 TCTGCACCTCGAAGA GAAACGCCCGG ACATCAC CCGGGCGTTTC TGCATTTTCTCGCCA TERM 2095 2838540 - 2838512 - g 82 -17.5 -3.04144 | opp_overlap 2838512 2838510 2838509 2838516, overlap 2838516 TCTGCACCTCGAAGA GAAACGCCCGGAC ATC ACCCGGGCGTTTC TGCATTTTCTCGCCA TERM 2096 2838516 - 2838536 + G 81 -11.1 -4.07786 | opp_overlap 2838512 2838516, overlap 2838512 2838510 2838509 CACCTCGAAGAGAAA CGCCCGG ACATCAC CCGGGCG TTTCTGCATTTTCTC TERM 2097 2838536 - 2838516 - g 91 -12.5 -4.19624 | opp_overlap 2838516 2838512 2838510 2838509, overlap 2838512 CACCTCGAAGAGAAA CGCCCGGAC ATC ACCCGGGCG TTTCTGCATTTTCTC Pmen_2574 2838477 - 2839205 + | UDP-2,3-diacylglucosamine hydrolase Pmen_2575 2840070 - 2839393 - | tRNA--hydroxylase TERM 2098 2840371 - 2840357 - g 75 -7 -4.33417 | GTTAGCGACAAGAAA GGCGAC CAC GGCGCC TGGCTCAACGACCTC Pmen_2576 2840228 - 2841091 + | UspA domain-containing protein TERM 2099 2841140 - 2841106 - T 86 -12.4 -3.90856 | gap 1, opp_overlap 2841113, overlap 2841113 AAGCGTTGAACGAAA CGAAAAATGCCGCTC TGAATC GAGCGGCATTTTT-G TTTCAGGGGCTAAAC TERM 2100 2841113 - 2841134 + T 100 -11.6 -5.27335 | opp_overlap 2841113 2841106 GAACGAAACGAAAAA TGCCGCTC TGAATC GAGCGGCA TTTTTGTTTCAGGGG TERM 2101 2841134 - 2841113 - T 100 -11.6 -5.04222 | opp_overlap 2841113, overlap 2841106 GAACGAAACGAAAAA TGCCGCTC TGAATC GAGCGGCA TTTTTGTTTCAGGGG Pmen_2577 2841626 - 2841150 - | hypothetical protein TERM 2102 2842152 - 2842137 - g 75 -4.6 -4.57569 | overlap 2842138 2842139 CGAGCTGCTGAAAAA CCCGCC GGCT GGCGAA GAAGAATTCCTCGTA Pmen_2578 2842030 - 2844630 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2103 2844670 - 2844648 - f 73 -10.5 -3.62046 | opp_overlap 2844650, overlap 2844650 CCAGCGTTGCAAGAA GAGCCCCGC CTAGT GCGGGGCTT TTTTATATGCGCGGC TERM 2104 2844650 - 2844668 + F 100 -13.1 -5.36441 | opp_overlap 2844648 2844650 AGCGTTGCAAGAAGA GCCCCGC CTAGT GCGGGGC TTTTTTATATGCGCG TERM 2105 2844668 - 2844650 - f 76 -13.1 -3.38991 | opp_overlap 2844650, overlap 2844648 AGCGTTGCAAGAAGA GCCCCGC CTAGT GCGGGGC TTTTTTATATGCGCG Pmen_2579 2844776 - 2844985 + | hypothetical protein TERM 2106 2845135 - 2845086 - f 79 -12.1 -3.51032 | gap 1, opp_overlap 2845080 2845087, overlap 2845073 2845087 AGGCCCGAACGACAA CGGCGTCGTATTCGAACTCGGCCT CTA AAGCCGTGATCGG-TACGACGCCT TTTTTGTGCGCCATC TERM 2107 2845134 - 2845087 - f 79 -15.6 -2.70298 | gap 1, opp_overlap 2845080 2845087, overlap 2845073 2845086 GGCCCGAACGACAAC GGCGTCGTATTCGAACTCGGCCT CTA AAGCCGTGATCGG-TACGACGCC TTTTTTGTGCGCCAT TERM 2108 2845087 - 2845134 + F 100 -15.6 -5.24531 | gap 1, opp_overlap 2845073 2845086 2845087, overlap 2845080 GGCCCGAACGACAAC GGCGTCGTATTCGAACTCGGCCT CTA AAGCCGTGATCG-GTACGACGCC TTTTTTGTGCGCCAT TERM 2109 2845643 - 2845625 - g 85 -7.4 -4.72007 | GTGCACCAAAATAAA GCGCGA CTGACCT TCGCGC AGACCTTCCCCACCG Pmen_2580 2845211 - 2846422 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Pmen_2581 2846442 - 2847020 + | response regulator receiver/ANTAR domain-containing protein Pmen_2582 2847259 - 2848371 + | hypothetical protein Pmen_2583 2848525 - 2849754 + | aminotransferase TERM 2110 2849779 - 2849762 - f 75 -14.1 -2.93348 | opp_overlap 2849762, overlap 2849755 GCGAGTAACAGCATA GGGCGCC GCAA GGCGCCC TTTCTGTTGGGCGCT TERM 2111 2849762 - 2849779 + F 100 -14.1 -4.19177 | opp_overlap 2849762 2849755 GCGAGTAACAGCATA GGGCGCC GCAA GGCGCCC TTTCTGTTGGGCGCT Pmen_2584 2849916 - 2850638 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase Pmen_2585 2850784 - 2850978 + | hypothetical protein Pmen_2586 2850987 - 2851229 + | hypothetical protein TERM 2112 2851234 - 2851249 + T 100 -11.8 -5.28176 | opp_overlap 2851234 AGCAGGCATGAAAAA GCCCGG TAAA CCGGGC TTTTTTCTGGATCGG TERM 2113 2851249 - 2851234 - T 100 -11.8 -4.75372 | opp_overlap 2851234 AGCAGGCATGAAAAA GCCCGG TAAA CCGGGC TTTTTTCTGGATCGG Pmen_2587 2851997 - 2851272 - | amidotransferase Pmen_2588 2852429 - 2852629 + | hypothetical protein Pmen_2589 2852684 - 2852950 + | hypothetical protein TERM 2114 2852984 - 2852957 - T 87 -9.8 -4.30809 | opp_overlap 2852959 2852963, overlap 2852958 2852963 GAAGACTGAGCAAAA TGGAAACGGCCC TTGC GGGCCGTTTCTG CTTGTGCGGCAGCCG TERM 2115 2852983 - 2852958 - T 78 -13.3 -3.17762 | opp_overlap 2852959 2852963, overlap 2852957 2852963 AAGACTGAGCAAAAT GGAAACGGCCC TTGC GGGCCGTTTCT GCTTGTGCGGCAGCC TERM 2116 2852959 - 2852982 + T 84 -16.8 -2.82623 | opp_overlap 2852958 2852957 2852963, overlap 2852963 AGACTGAGCAAAATG GAAACGGCCC TTGC GGGCCGTTTC TGCTTGTGCGGCAGC TERM 2117 2852963 - 2852978 + T 84 -11.8 -4.1021 | opp_overlap 2852958 2852957 2852963, overlap 2852959 TGAGCAAAATGGAAA CGGCCC TTGC GGGCCG TTTCTGCTTGTGCGG TERM 2118 2852978 - 2852963 - T 82 -11.8 -3.94846 | opp_overlap 2852963 2852959, overlap 2852958 2852957 TGAGCAAAATGGAAA CGGCCC TTGC GGGCCG TTTCTGCTTGTGCGG Pmen_2590 2855191 - 2853047 - | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase TERM 2119 2853710 - 2853725 + g 79 -4.6 -4.81551 | GCCGCGGCTGTCGTT GACCAC GATG GGGGTC TTTTTGATCTGCATG TERM 2120 2855048 - 2855006 - G 73 -11.2 -3.62775 | opp_overlap 2855006 2855006 ACCACCGGCGAAGAA GGTTTTCTTCGCCGAGGTGA CGA TCACCCCGGCGATCGAATCC CTTTCCGCTTCCAGA TERM 2121 2855137 - 2855165 + g 74 -7.4 -4.2558 | overlap 2855138 2855159 GGCCGGGCATGTCCA TGGTCAGGACGA CGATA TTGTCCTGGCCC TTTTCGTAACGGATG Pmen_2591 2856558 - 2855353 - | acetyl-CoA acetyltransferase TERM 2122 2856906 - 2856885 - H 75 -2.1 -5.00616 | CCCGTGCGGAAAAAA CGGGTACAG GGAG CCGTCGCCG GGTCATGCCGGGGCG Pmen_2592 2857246 - 2857605 + | rhodanese domain-containing protein TERM 2123 2857600 - 2857613 + F 71 -6.7 -4.18934 | CTGCTGGAGGCCGAC CAGTG AAAG CACTG TTTCTTGCGCTGCTG Pmen_2593 2857602 - 2858411 + | hypothetical protein Pmen_2594 2858879 - 2858490 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2124 2858758 - 2858740 - G 72 -8.8 -4.12198 | TAGAAGCGTGGAAAA GCCAGATC CTC GACCCGGC CATAGCCGACCGAGG TERM 2125 2858854 - 2858830 - G 78 -9.9 -4.03413 | overlap 2858816 AGCGGGTCATAGAAA CGCAGGGCCTG TGG CAGATCCCGCG TTCCCACCATGGTGT Pmen_2595 2859788 - 2858991 - | transglutaminase domain-containing protein Pmen_2596 2860735 - 2859785 - | hypothetical protein Pmen_2597 2862148 - 2860739 - | hypothetical protein TERM 2126 2862268 - 2862252 - R 100 -10.1 -4.76213 | ACAAACCGAACAAAA CGCACCA TCT CGGTGCG GCGCAATCTTTCCGT TERM 2127 2862367 - 2862357 - R 70 -3.2 -4.68424 | overlap 2862366 CAATGCAGGCAAAAA GCCT GCA AAGC CCGCGCTGACACGGG TERM 2128 2862383 - 2862366 - R 73 -10.5 -3.61889 | overlap 2862357 CAAAAAGCCTGCAAA GCCCGCG CTGA CACGGGC CGGGACACTTAGCTG Pmen_2598 2863215 - 2862541 - | hydrolase of the alpha/beta-hydrolase fold-like protein TERM 2129 2863235 - 2863275 + H 89 -16.2 -3.29829 | gap 1, overlap 2863234 GCCTCGCGTCGATAT CCGTGGTGTCCGT-GGCTT GCTC ATGCCTGCGGGCACCACGG TTATCGGCCGCTCTG Pmen_2599 2863317 - 2864756 + | cytochrome c oxidase, cbb3-type, subunit I Pmen_2600 2864756 - 2865364 + | cytochrome c oxidase, cbb3-type, subunit II Pmen_2601 2865370 - 2865549 + | Cbb3-type cytochrome oxidase component Pmen_2602 2865546 - 2866472 + | cytochrome c oxidase, cbb3-type, subunit III TERM 2130 2866481 - 2866513 + F 76 -13.3 -3.09655 | opp_overlap 2866473 CAAGTAATACCCCGC TGCACCGGCGACCGA CCA TCGGTCGCCGGCCCC TCTATATATATGTGC Pmen_2603 2866523 - 2866801 + | hypothetical protein Pmen_2604 2866818 - 2868260 + | cytochrome c oxidase, cbb3-type, subunit I Pmen_2605 2868260 - 2868868 + | cytochrome c oxidase, cbb3-type, subunit II Pmen_2606 2868875 - 2869069 + | Cbb3-type cytochrome oxidase component Pmen_2607 2869066 - 2870064 + | cytochrome c oxidase, cbb3-type, subunit III TERM 2131 2870126 - 2870093 - f 95 -18.2 -3.36135 | gap 1, opp_overlap 2870093 ACAAGGGTCAATGAA CGCCCGGGACGCGAC TGCTG GTCGCA-CCCGGGCG TTGTCTTTCAGGCGT TERM 2132 2870093 - 2870126 + F 100 -16.7 -3.81755 | gap 1, opp_overlap 2870093 ACAAGGGTCAATGAA CGCCCGGGACGCGACT GCT GGTCGCA-CCCGGGCG TTGTCTTTCAGGCGT TERM 2133 2870699 - 2870679 - g 74 -12.5 -3.5393 | overlap 2870692 ATGAGCGGCGCGAAA CTGGGCCGC AAA GCGGCCAAG CACGGTATCTGGGTG TERM 2134 2870984 - 2870972 - g 78 -10.5 -4.07568 | GCGCCGCGGCGAAAA GCGCG GCC CGCGC AAGAAGGAGGCCGAC Pmen_2608 2870220 - 2871632 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2135 2871873 - 2871844 - g 83 -8.5 -4.59773 | gap 1 CTGGAGCGGGAAAAA CTGGCCGAAC-GCC TGC AGCTGCACGGCCAG ATGGTGCTGGATGAA Pmen_2609 2871646 - 2872164 + | hypothetical protein Pmen_2610 2872173 - 2874581 + | heavy metal translocating P-type ATPase Pmen_2611 2874602 - 2874808 + | cytochrome oxidase maturation protein, cbb3-type Pmen_2612 2874801 - 2875484 + | hypothetical protein Pmen_2613 2875652 - 2877034 + | coproporphyrinogen III oxidase Pmen_2614 2877505 - 2877062 - | hypothetical protein Pmen_2615 2877658 - 2878392 + | CRP/FNR family transcriptional regulator Pmen_2616 2878437 - 2878985 + | adenine phosphoribosyltransferase Pmen_2617 2879079 - 2879897 + | Ion transport protein TERM 2136 2879916 - 2879934 + F 100 -17.4 -3.59979 | CTCCTTCAGTCGAGA CGGCGGGC CAT GCCCGCCG TTTCGCCTCGGGCGA TERM 2137 2880520 - 2880494 - g 70 -6.5 -4.2704 | gap 1 TTCAGCACCAAGAAA CAGCGC-CTGGC CGCC ACCTGCGCGCTG GAGCACTTCACCGCG Pmen_2618 2880122 - 2880958 + | metal-dependent hydrolase-like protein TERM 2138 2880968 - 2880985 + T 100 -14.1 -4.72272 | AACTGATGTCCCTTC GGGCGGC CTTG GCCGCCC TTTTTCATGGCCCCG Pmen_2619 2881776 - 2881069 - | TetR family transcriptional regulator Pmen_2620 2881893 - 2883446 + | cyclohexanone monooxygenase Pmen_2621 2883443 - 2884330 + | short-chain dehydrogenase/reductase SDR TERM 2139 2884376 - 2884349 - f 77 -14.8 -2.82516 | opp_overlap 2884348 2884347, overlap 2884351 2884353 CTGGTCAGCAGCAGA CACAGGGCTGGC CATT GCCGGCCCTGCG CGTTTGTCGGGCAAC TERM 2140 2884374 - 2884351 - f 75 -13.8 -2.96216 | opp_overlap 2884348 2884347, overlap 2884349 2884353 GGTCAGCAGCAGACA CAGGGCTGGC CATT GCCGGCCCTG CGCGTTTGTCGGGCA Pmen_2622 2884529 - 2884777 + | hypothetical protein Pmen_2623 2885130 - 2884915 - | hypothetical protein TERM 2141 2885043 - 2885071 + g 74 -12.3 -3.51825 | opp_overlap 2885042, overlap 2885068 2885069 ACCAGTTGAGGTAAT GGCCCGGCAGGTC GGC GATCAGCCGGTCC TTGTACTTGCCGTAG Pmen_2624 2885770 - 2885177 - | DSBA oxidoreductase Pmen_2625 2886545 - 2885814 - | short-chain dehydrogenase/reductase SDR TERM 2142 2886510 - 2886475 - G 82 -11.8 -4.11216 | gap 1 CCCTCACGGGCAAAA CGCCGGGCAATGGCACC ACC GGTGGCGTCGC-CGGCG CCGATGATCAAGGCG TERM 2143 2886888 - 2886841 - g 74 -14.7 -3.04322 | gap 1, opp_overlap 2886877 GCGAACTGCGCAACA GCCTGGCGCGGCTCGGCGGCGC GCCGG GCGAAGCCG-GACGCGACAGGC TGCAACGCTGCCTGG Pmen_2626 2886636 - 2887202 + | TetR family transcriptional regulator Pmen_2627 2887251 - 2887901 + | hypothetical protein Pmen_2628 2887901 - 2888248 + | hypothetical protein Pmen_2629 2888315 - 2888797 + | MarR family transcriptional regulator TERM 2144 2888803 - 2888815 + F 84 -10.5 -4.23213 | opp_overlap 2888803 CGCTCTCTGACAGCA GGCGG TAG CCGCC TTTCTTCCCTATCCG Pmen_2630 2889175 - 2889600 + | OsmC family protein TERM 2145 2889637 - 2889614 - f 82 -12.4 -3.61654 | GACAGCTACGGCAAA GCGCTCACGG TCCT CCCTGAGCGC AGCCCAAGAGGAGAA Pmen_2631 2889658 - 2889918 + | hypothetical protein Pmen_2632 2889952 - 2890968 + | alpha/beta hydrolase domain-containing protein TERM 2146 2891017 - 2890981 - T 100 -13.8 -4.58283 | gap 1, opp_overlap 2890986, overlap 2890986 TAAGCGGCTGAAAAA CG-AAACCCCGCCACCG TCAC CGGTCGCGGGGTTTTCA TTTGCCTGGCCGGTG TERM 2147 2891011 - 2890986 - T 100 -16.1 -4.32046 | opp_overlap 2890986, overlap 2890981 GGCTGAAAAACGAAA CCCCGCCACCG TCAC CGGTCGCGGGG TTTTCATTTGCCTGG TERM 2148 2890986 - 2891011 + T 100 -16.1 -4.56914 | opp_overlap 2890986 2890981 GGCTGAAAAACGAAA CCCCGCCACCG TCAC CGGTCGCGGGG TTTTCATTTGCCTGG TERM 2149 2891029 - 2891047 + T 85 -12.4 -3.73783 | TTCATTTGCCTGGCC GGTGCGCG CCG CGTGCACC TTCTTGAATTACATC Pmen_2633 2892423 - 2891056 - | putative aminotransferase Pmen_2634 2893793 - 2892447 - | glutamate--putrescine ligase TERM 2150 2892492 - 2892509 + g 75 -6.9 -4.31433 | opp_overlap 2892492, overlap 2892493 GATGTCGTGCATGAA GGCCAGG TGAT CCTGGCG TTTGTTCTCGCAATA Pmen_2635 2894379 - 2893822 - | XRE family transcriptional regulator Pmen_2636 2895687 - 2894398 - | FAD dependent oxidoreductase TERM 2151 2895398 - 2895413 + g 88 -10.4 -4.36914 | CAGAGGCGGCGAGCA CGCTCG ATGC CGAGCG TTTTCTCCAGCGGCG TERM 2152 2895783 - 2895742 - R 71 -7.3 -4.17698 | gap 1, overlap 2895750 ATCTATAGAGATAAA TTCACAAAGGCAAGCTCGAG CGG CTCGAGGGCGCC-CTGCGAA AGACTACCCGCAGCC TERM 2153 2895776 - 2895750 - R 71 -8.6 -4.04922 | overlap 2895742 AGATAAATTCACAAA GGCAAGCTCGAG CGG CTCGAGGGCGCC CTGCGAAAGACTACC Pmen_2637 2896101 - 2895802 - | antibiotic biosynthesis monooxygenase TERM 2154 2896030 - 2895981 - G 70 -3.6 -4.43844 | gap 3, overlap 2895998 TGAGCAGCGAGAAAA TCCGCAGG-CGCAGGCAA-CCGGGA ATG TCCCGACCTACCT-CGTCCAGCCGA GCCAGGCACTGCCCC Pmen_2638 2896595 - 2897542 + | AraC family transcriptional regulator Pmen_2640 2898884 - 2897736 - | acyl-CoA dehydrogenase domain-containing protein TERM 2155 2898886 - 2898898 + r 71 -6.9 -4.20868 | TGAGGGGCGGCCATG CGGGG TTC TCCCG TTATTGTTTTGGCCA ftrA 2899929 - 2898961 - | transcriptional activator FtrA Pmen_2642 2900027 - 2900464 + | rhodanese domain-containing protein TERM 2156 2900868 - 2900842 - g 83 -4.4 -4.98531 | gap 1, overlap 2900843 GCGGGAAATCAAAAA GCCGA-GCGCT TCTATC AGCGCCTGGGC GGACAACCCGATACC Pmen_2643 2900458 - 2900979 + | GCN5-related N-acetyltransferase Pmen_2644 2901529 - 2900960 - | hypothetical protein TERM 2157 2901454 - 2901423 - G 84 -14.4 -3.93398 | opp_overlap 2901428 ACGCACAGACAAGAA CCGCCCAGGCAGAC CTGT ATCTGCCCGGTCGG GCATTGCGCCTGGGC recR 2902159 - 2901560 - | recombination protein RecR Pmen_2646 2902740 - 2902414 - | hypothetical protein Pmen_2647 2904845 - 2902767 - | DNA polymerase III subunits gamma and tau Pmen_2648 2905303 - 2905524 + | hypothetical protein Pmen_2649 2905578 - 2905865 + | hypothetical protein TERM 2158 2905908 - 2905888 - T 77 -11.8 -3.58726 | opp_overlap 2905888 CCCCCCCACAGACAA GCCCGCGC TCAGT ACGCGGGC TTTTTGTTGCGCGCA TERM 2159 2905888 - 2905908 + T 100 -11.1 -5.06414 | opp_overlap 2905888 CCCCCCCACAGACAA GCCCGCG CTCAGTA CGCGGGC TTTTTGTTGCGCGCA TERM 2160 2906131 - 2906105 - T 81 -13.6 -3.41051 | opp_overlap 2906102 GCAGGGCCACCATAA CGCTGCCCGCCA TTG CGACGGGCCGCG CCATTGTAACGACTA Pmen_2650 2907902 - 2906196 - | methyl-accepting chemotaxis sensory transducer TERM 2161 2906693 - 2906719 + g 83 -14.4 -3.78775 | CGATGCCCTTGATCA CCGCCAGCACCG CGC CGATGTTGGCGG TTTCCTGCTCCAGGG Pmen_2651 2908163 - 2908441 + | histone family protein DNA-binding protein TERM 2162 2908449 - 2908478 + F 91 -13.6 -3.79519 | TCAATTGAGTTCCTG CTGGCCGCCG CGCGCACCAA CGGCGGCCAG TTTCCTGCTCCGGTT TERM 2163 2909607 - 2909576 - g 72 -11.4 -3.54029 | GGCGAGCAACGACAA GGCGCACGACTGGC TGCT GCGCGCCGCGCGCC AGGGCAGCGCGGCCG Pmen_2652 2908593 - 2909825 + | Sel1 domain-containing protein TERM 2164 2909839 - 2909863 + G 77 -11.3 -3.77553 | GATGGCCAGCCTGCC CCGCCTGGCGG GCT CCTCCAAGCGG TTGTTGATGCTCTTG TERM 2165 2911601 - 2911584 - g 75 -4.8 -4.63218 | GCGTGGCGAAGAAAA TCCGCC TGCATC GGCAGA TCACCCGGGTGATGC Pmen_2653 2909825 - 2912137 + | diguanylate cyclase/phosphodiesterase Pmen_2654 2912446 - 2912150 - | hypothetical protein Pmen_2655 2912960 - 2912466 - | blue (type1) copper domain-containing protein TERM 2166 2912981 - 2913011 + r 78 -13.3 -3.14344 | gap 2 AATCCTCGCTTGCTG TGGGGACCGGGCCGC GTG GCGGCCC-G-CCCCG TTAATGCCCGGCATG TERM 2167 2913017 - 2913036 + r 72 -12.1 -3.07935 | GCCCGCCCCGTTAAT GCCCGGC ATGACC GCCGGGC TTGCGTACCTGCACT Pmen_2656 2914424 - 2913012 - | multicopper oxidase, type 3 Pmen_2657 2915841 - 2914441 - | outer membrane efflux protein TERM 2168 2914971 - 2915017 + g 78 -16 -3.14132 | overlap 2914975 GGCCGAGGTTCTGCG CCAGGCGCTCGG-CATCCAGGC GCACG GCCTGGATGTCCTGGCG-CTGG TTCATGGCCAGGCGC TERM 2169 2914975 - 2915014 + g 77 -16.5 -2.77899 | gap 1, overlap 2914971 GAGGTTCTGCGCCAG GCGCTCGG-CATCCAGGC GCACG GCCTGGATGTCCTGGCGC TGGTTCATGGCCAGG Pmen_2658 2916127 - 2915828 - | hypothetical protein Pmen_2659 2916606 - 2916202 - | hypothetical protein TERM 2170 2916260 - 2916290 + g 70 -11.1 -3.53091 | gap 1, opp_overlap 2916259 ACGCCGACGATAAGG CGGTCGGGCCAGGC TGTA GCC-GGCTCGACGG TTTGCAGGGCAGAGT Pmen_2660 2918103 - 2916676 - | arginine/ornithine antiporter TERM 2171 2917165 - 2917147 - G 74 -10.2 -3.85698 | opp_overlap 2917150 CTCCCGGCGCAGAAA GGCCGGCA TGG TGCCGTCC TTGGCAGAGACGAAG TERM 2172 2918502 - 2918533 + G 70 -11.4 -3.46509 | opp_overlap 2918463 AGCTGGTGGTGGTGC GTCCGGCGGGCAGC CAGG GCAACCTGCCGGGC TTCATGTTCTTCCAC Pmen_2661 2918267 - 2919244 + | alpha/beta hydrolase domain-containing protein Pmen_2662 2919383 - 2920069 + | isochorismatase hydrolase Pmen_2663 2920074 - 2920745 + | hypothetical protein TERM 2173 2920958 - 2920940 - g 70 -2.3 -4.59773 | gap 1, opp_overlap 2920955, overlap 2920941 2920942 GTCGACCGCGAAAAA CCCCAGGC CAGC GCC-GTGG CCATCAAGGACGGAC TERM 2174 2921408 - 2921374 - g 83 -12.9 -3.84406 | gap 1 GGGCTACGACAAGAA CACGCCGAACC-CGCC CGGT GGCGAGATCCAGCGTG ACGCCAGCGGCGAGC Pmen_2664 2920742 - 2922724 + | amidohydrolase 3 Pmen_2665 2922726 - 2924354 + | protein of unknown function DUF894, DitE Pmen_2666 2924385 - 2925155 + | hypothetical protein Pmen_2667 2925142 - 2928195 + | histidine kinase Pmen_2668 2928192 - 2928833 + | two component LuxR family transcriptional regulator Pmen_2669 2928920 - 2929486 + | AraC family transcriptional regulator Pmen_2670 2930089 - 2929487 - | glutathione S-transferase domain-containing protein Pmen_2671 2931352 - 2930195 - | GntR family transcriptional regulator TERM 2175 2931465 - 2931453 - H 78 -2.7 -5.09895 | GACTGACCTAAAAAA TTTCC CCG AGAAA TTTTTGACCGCGCCC Pmen_2672 2931520 - 2931957 + | MarR family transcriptional regulator Pmen_2673 2932147 - 2932671 + | RNA polymerase sigma factor TERM 2176 2933197 - 2933215 + G 76 -6.6 -4.4767 | overlap 2933198 CGGCGCAGGGCCGCC TGCGTGCC CTG GGGACGCG TTTTCTGGTGCGTCG Pmen_2674 2932668 - 2933624 + | putative FecR Pmen_2675 2933703 - 2936111 + | TonB-dependent siderophore receptor Pmen_2676 2936976 - 2936329 - | hypothetical protein TERM 2177 2936897 - 2936862 - G 71 -14.6 -2.65264 | CTACCACCGAGACCA GCGCCAGCCAGCCGAG CACC CGCAGCTGGCGAGCGC TCCAGCCTGGCAGGC TERM 2178 2937024 - 2937003 - H 74 -5.7 -4.56597 | overlap 2937005 2937017 CTTGTTCGGCAAAAA CCCGAGGCT AACC AGCCGCGCG GCGCTTGACCAGACT Pmen_2677 2937121 - 2937732 + | lysine exporter protein LysE/YggA TERM 2179 2937754 - 2937800 + G 72 -13 -3.15861 | gap 1 ACGTCGCCCCTACCC GCCTGCGCCCACTGGCCGA TACCTCCACC TCGGCC-GTGGTCGCTGGC TTCATCGCCATGCTC Pmen_2678 2937732 - 2938922 + | benzoate transporter Pmen_2679 2939911 - 2939018 - | bile acid:sodium symporter Pmen_2680 2940782 - 2940021 - | short chain dehydrogenase Pmen_2681 2941735 - 2940998 - | orotidine 5'-phosphate decarboxylase Pmen_2682 2941924 - 2943318 + | ethanolamine ammonia lyase large subunit Pmen_2683 2943318 - 2944082 + | ethanolamine ammonia-lyase light chain Pmen_2684 2944137 - 2944310 + | hypothetical protein TERM 2180 2944429 - 2944453 + G 70 -9.9 -3.72695 | overlap 2944440 TGCTCCCCGCGCTCA CCCTGGCCC TGGGCAC GGGCCTGGG TTTCATCCAGCCCGT Pmen_2685 2944392 - 2945150 + | abortive infection protein Pmen_2686 2945892 - 2945101 - | extracellular solute-binding protein TERM 2181 2945201 - 2945175 - G 75 -7.3 -4.42788 | GGTAAGGCGAGAAAA TGCGCGCCA GCTCGCCAT TGGCACGCA GCTGCTCGAGCAGCG Pmen_2687 2946779 - 2945994 - | hypothetical protein Pmen_2688 2947502 - 2946879 - | TetR family transcriptional regulator TERM 2182 2948443 - 2948485 + G 72 -11.8 -3.59979 | opp_overlap 2948455, overlap 2948444 AGACGATGGCCGTTT CGTCGTGACCAAGCCGGAGG GTT CCGGCGGCCTGGTCACGCCC TTTACCGTCGGCGAG TERM 2183 2948444 - 2948484 + G 75 -15.3 -2.75844 | opp_overlap 2948455, overlap 2948443 GACGATGGCCGTTTC GTCGTGACCAAGCCGGAGG GTT CCGGCGGCCTGGTCACGCC CTTTACCGTCGGCGA TERM 2184 2949563 - 2949505 - g 80 -17.5 -2.71712 | gap 2, overlap 2949504 GGCGCTGGCGCAAAC CTTGATTGGTGCGCACGGCGCACCCTACA CCC CGTAGGGTGCGCCGCGCGCACCGG-CAT- CAGTCAGGACAACAA Pmen_2689 2947703 - 2949541 + | hypothetical protein TERM 2185 2949938 - 2949960 + G 70 -4 -4.46212 | overlap 2949939 2949940 GGCTTCGAGACCGTG GTGCGCACCA ACC TGGTGGGCGG TTTTCTGGTGGCCAA Pmen_2690 2949584 - 2950453 + | short-chain dehydrogenase/reductase SDR TERM 2186 2950743 - 2950712 - g 76 -15.8 -2.87243 | opp_overlap 2950739, overlap 2950694 2950709 GCACGACGACAAGGA CGGCAGCCAGGCCG GCGG CGGCCTGATCGCCG GTATCGGCTACATCG TERM 2187 2951275 - 2951241 - g 71 -14.4 -2.87132 | gap 1 TTGGCGCGCGAGATA GTCGGCATGCTGCCG TGGAAC CAGCAGC-TGCCGAC ACGTGAGAAACGCAC TERM 2188 2951396 - 2951354 - g 100 -11.3 -4.62069 | opp_overlap 2951387 GGCGGACGCCAAAAA GCCCTACGACG-TGCGCGAGA TCA TCGCGCGCATCGCCG-ACGGC TCGGCGTTTCTCGAC TERM 2189 2951387 - 2951402 + G 77 -10.4 -3.92522 | opp_overlap 2951354 GATCATCGCGCGCAT CGCCGA CGGC TCGGCG TTTCTCGACTTCAAG Pmen_2691 2950458 - 2952074 + | propionyl-CoA carboxylase TERM 2190 2952112 - 2952087 - f 74 -3.9 -4.84359 | gap 1, overlap 2952089 TGACCTCGATAAAAA GATTCGGTGCGC ACA GCGCACCCTA-C GGAGAACAACAATGA TERM 2191 2952111 - 2952089 - f 71 -7.6 -4.04397 | overlap 2952087 ACCTCGATAAAAAGA TTCGGTGCGC ACA GCGCACCCTA CGGAGAACAACAATG Pmen_2692 2952124 - 2953284 + | acyl-CoA dehydrogenase domain-containing protein Pmen_2693 2953358 - 2954155 + | enoyl-CoA hydratase/isomerase Pmen_2694 2954349 - 2956334 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 2192 2956622 - 2956670 + G 72 -11.6 -3.56643 | gap 1 CCCTGCAGCTGGATG TGCGC-GATGAGCAGGCCGTGGC GGCC GCCATGGCCCGCGCAGCCGAGCA TTTCGGCGGTATCGA Pmen_2695 2956414 - 2957238 + | short chain dehydrogenase TERM 2193 2958001 - 2957969 - g 80 -14.1 -3.62597 | overlap 2957992 GTGATCGGCGAAGAA CTGCTCGGCGCCTTC GAG GAAATCGCCGCGCAG CTGCACAGTCAGCAG TERM 2194 2959233 - 2959215 - g 85 -8.1 -4.84492 | overlap 2959216 TCAAGTACAAGAAAA CCGACCT CAAGC AGGCCGG CTACGACCCGGGCAA Pmen_2696 2957525 - 2959351 + | acyl-CoA synthetase Pmen_2697 2959868 - 2959353 - | hypothetical protein TERM 2195 2959415 - 2959453 + g 70 -10.3 -3.66921 | AGTAGTCGTCCACCC GCTCGTTGTTGATCAGC CGACC GCTGATCTGGAACGGGC TTTGGACTTCGGGTT Pmen_2698 2960638 - 2959949 - | hypothetical protein Pmen_2699 2961207 - 2960635 - | RNA polymerase sigma factor TERM 2196 2961184 - 2961139 - G 100 -20.3 -3.07443 | opp_overlap 2961145 GTACAGCGCATTGAA GGCCGCCGCGTCGCCGCGGCG GTAA CGCCGCAGCAAGGCGGCGTCG TCATCCGTGAGAGGT Pmen_2700 2962904 - 2961204 - | von Willebrand factor, type A TERM 2197 2961807 - 2961825 + g 73 -12.4 -3.39327 | CTGATCCACCAGCAC CTTGCGCG CCT CGCGCAGG TTGTCGATGTAGGCG Pmen_2701 2964499 - 2962991 - | GntR family transcriptional regulator TERM 2198 2964610 - 2964580 - R 100 -10.6 -5.04385 | gap 1, opp_overlap 2964586, overlap 2964586 CATACCTGTAAAAAA CA-AAAACCCCGG ACACTG CCGGGGTTTTCTG CATATTGCTCTCAGC TERM 2199 2964586 - 2964603 + r 89 -9.8 -4.4727 | opp_overlap 2964586 2964580 TGTAAAAAACAAAAA CCCCGG ACACTG CCGGGG TTTTCTGCATATTGC TERM 2200 2964603 - 2964586 - R 100 -9.8 -5.75538 | opp_overlap 2964586, overlap 2964580 TGTAAAAAACAAAAA CCCCGG ACACTG CCGGGG TTTTCTGCATATTGC Pmen_2702 2965433 - 2964621 - | OmpA/MotB domain-containing protein Pmen_2703 2965783 - 2965433 - | hypothetical protein Pmen_2704 2966626 - 2965793 - | extracellular solute-binding protein Pmen_2705 2966742 - 2967671 + | alpha/beta hydrolase fold TERM 2201 2967755 - 2967708 - T 74 -12.8 -3.2048 | opp_overlap 2967723, overlap 2967700 2967709 2967723 GCGAAACTTGACCAA GCGCCAATAAAAAAACCCGCTC CGAG GAGCGGGTTCTTCTAGCAGCGG AAAAAGTGGTTAGAC TERM 2202 2967754 - 2967709 - T 78 -16.3 -2.51966 | opp_overlap 2967723, overlap 2967700 2967708 2967723 CGAAACTTGACCAAG CGCCAATAAAAAAACCCGCTC CGAG GAGCGGGTTCTTCTAGCAGCG GAAAAAGTGGTTAGA TERM 2203 2967740 - 2967723 - T 100 -12.7 -5.7946 | opp_overlap 2967723, overlap 2967709 2967708 GCGCCAATAAAAAAA CCCGCTC CGAG GAGCGGG TTCTTCTAGCAGCGG TERM 2204 2967723 - 2967740 + T 85 -12.7 -3.78934 | opp_overlap 2967723 2967709 2967708 GCGCCAATAAAAAAA CCCGCTC CGAG GAGCGGG TTCTTCTAGCAGCGG Pmen_2706 2968694 - 2967765 - | electron transfer flavoprotein, alpha subunit TERM 2205 2968245 - 2968196 - G 90 -18 -3.53012 | overlap 2968243 2968244 CGGCCGGGCCGGAAA CGGCTTCAACGGCAGC-GCTGCCG CCTT CGGCAGCCGCGGC-GTCGAAACCG GTGCTACGCACGGTG Pmen_2707 2969444 - 2968695 - | electron transfer flavoprotein beta-subunit Pmen_2708 2969769 - 2971433 + | electron-transferring-flavoprotein dehydrogenase TERM 2206 2971446 - 2971475 + T 100 -18.1 -4.21607 | opp_overlap 2971453, overlap 2971453 TAATTCGGCCACGCA TGAAAAAGGCTCC CTCG GGAGCCTTTTTCA TTTCTGTTGAATCAG TERM 2207 2971468 - 2971453 - T 100 -10.4 -4.7497 | opp_overlap 2971453 2971446 GCCACGCATGAAAAA GGCTCC CTCG GGAGCC TTTTTCATTTCTGTT TERM 2208 2971453 - 2971468 + T 100 -10.4 -5.08367 | opp_overlap 2971453, overlap 2971446 GCCACGCATGAAAAA GGCTCC CTCG GGAGCC TTTTTCATTTCTGTT Pmen_2709 2972337 - 2971561 - | oxidoreductase Pmen_2710 2973551 - 2972340 - | O-succinylhomoserine sulfhydrylase TERM 2209 2973628 - 2973570 - R 100 -15.8 -4.26903 | opp_overlap 2973571 2973585, overlap 2973571 GCTACCTCACGAAAA GTAGCCCGGATGCAATCCG-GGAAAT-TCA GTG TGACATTCCCCCGGATTGCATCCGGGCT-- ACGGAGCGGGTGCGC TERM 2210 2973629 - 2973571 - R 100 -28.7 -3.1582 | gap 2, opp_overlap 2973571 2973585, overlap 2973570 CTACCTCACGAAAAG TAGCCCGGATGCAATCCG-GGAAAT-TCA GTG TGACATTCCCCCGGATTGCATCCGGGCTA CGGAGCGGGTGCGCC TERM 2211 2973684 - 2973661 - R 93 -16 -3.55444 | opp_overlap 2973654 TGCGCACCGCCGAAA CGGGCAGGAC TGCC GCCCTGCCCG CTCGAATCAATTGTT Pmen_2711 2975199 - 2973691 - | amidophosphoribosyltransferase TERM 2212 2975238 - 2975272 + r 81 -16.4 -2.94099 | overlap 2975242 TTCAGGCTAACTTCA GCGCCTGCCACGGC GGTTTGG GCCATGGCGGGCGC TCTGTAATGAGGCGG Pmen_2712 2975801 - 2975289 - | colicin V production protein TERM 2213 2975404 - 2975377 - G 76 -6.2 -4.4891 | overlap 2975378 GCGACCATCAGAAAA TGCGGCACCAGT TGCG ACTGCTGCCACC ATGCATCCTGTTCCA TERM 2214 2975886 - 2975876 - R 78 -6.8 -4.65895 | overlap 2975877 CCGGCCATTGAAAAA CGTC GGC GACG ACTGCATGGATGCAG Pmen_2713 2976773 - 2976159 - | sporulation domain-containing protein Pmen_2714 2978066 - 2976789 - | FolC bifunctional protein Pmen_2715 2978947 - 2978063 - | acetyl-CoA carboxylase subunit beta Pmen_2716 2979717 - 2979064 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 2215 2979489 - 2979451 - G 71 -9.4 -3.78775 | overlap 2979483 CTCGTCACCATGAAA CTGCAACAGGTCCAGCGG CAC CCGCTGCAACAGCTGCTG CAGCTCGGCGCGCGG truA 2980605 - 2979742 - | tRNA pseudouridine synthase A TERM 2216 2980587 - 2980558 - G 85 -14.3 -4.09685 | gap 1, overlap 2980559 2980562 GGCGATTCTGGAAAA GCCAGCGGCCGCCA TTT CGGCGGCCGCTA-C AGGTACTACGTCAGA TERM 2217 2980587 - 2980559 - G 74 -14.5 -3.05597 | overlap 2980558 2980562 GCGATTCTGGAAAAG CCAGCGGCCGCCA TTT CGGCGGCCGCTAC AGGTACTACGTCAGA TERM 2218 2980584 - 2980562 - G 87 -18.4 -2.74784 | overlap 2980558 2980559 ATTCTGGAAAAGCCA GCGGCCGCCA TTT CGGCGGCCGC TACAGGTACTACGTC Pmen_2718 2983409 - 2980614 - | Tfp pilus assembly protein FimV-like protein TERM 2219 2982219 - 2982238 + g 72 -11.4 -3.57144 | opp_overlap 2982205, overlap 2982220 AGGCGGCGTCGGGGT TTGCGCCG CAGG CGGCGCAG TTTCCGGCTCGGCGA Pmen_2719 2984575 - 2983565 - | aspartate-semialdehyde dehydrogenase TERM 2220 2983868 - 2983858 - G 70 -2.4 -4.63218 | TGTCGCCGAAGAAAA CCGG CAC CAGG GCGCAAGTCGCCGCC TERM 2221 2984689 - 2984658 - R 93 -15.2 -3.82117 | opp_overlap 2984658 2984661, overlap 2984662 TCGAGCCATAAAAGA CAAAGCCCCTCTGC CGAA GCAGAAGGGCCCTG TTTGACTCCGAATGC TERM 2222 2984685 - 2984662 - R 100 -14.6 -4.51238 | opp_overlap 2984661 2984658, overlap 2984658 GCCATAAAAGACAAA GCCCCTCTGC CGAA GCAGAAGGGC CCTGTTTGACTCCGA Pmen_2720 2985828 - 2984716 - | aspartate-semialdehyde dehydrogenase TERM 2223 2985878 - 2985849 - R 71 -7.8 -4.07868 | gap 1 CTACACCTATATAAA CAGCC-CGCCGGA CCCAC CCCGGCGCAGCCG TGGAAGATTACAGAC Pmen_2721 2986968 - 2985886 - | 3-isopropylmalate dehydrogenase TERM 2224 2987046 - 2987024 - R 73 -9.8 -3.62518 | overlap 2987027 TTAAATAGTCTTAAA TCAGGTGCGC ACA GCGCACCCTA TCGAACGCCTTACTT TERM 2225 2987043 - 2987027 - R 75 -13.7 -2.92439 | overlap 2987024 AATAGTCTTAAATCA GGTGCGC ACA GCGCACC CTATCGAACGCCTTA Pmen_2722 2987703 - 2987056 - | 3-isopropylmalate dehydratase, small subunit Pmen_2723 2989142 - 2987715 - | isopropylmalate isomerase large subunit TERM 2226 2989079 - 2989091 + g 71 -9.1 -3.78597 | opp_overlap 2989079 2989078 2989074 AGATCAACGAGGAAC CGTCG TCG CGACG TTTCACTTCGTGCAT TERM 2227 2989455 - 2989470 + G 77 -6.8 -4.56597 | opp_overlap 2989465, overlap 2989456 ACGCCTTTATCGCCA TTGCCG AAAC CGGCAG TTTTTCCGAAGCCGG TERM 2228 2989919 - 2989875 - g 70 -11.1 -3.53012 | opp_overlap 2989873 CCCTCGCCCCGGAAA CCCGCGAGCCGATCCGCGCCG TGG CGGTGTGGGACGACCCGCTGG ACTTCGTCGCCGCCC Pmen_2724 2989421 - 2990302 + | LysR family transcriptional regulator Pmen_2725 2990402 - 2992555 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 2229 2992630 - 2992599 - T 81 -8.6 -4.62783 | opp_overlap 2992603, overlap 2992603 2992606 CATCCATGGCAAAAA CGCAGAAGGCGCCC CGCG GGGCGCCTTCTTTT TCGGCATCGACCGGA TERM 2230 2992603 - 2992626 + T 100 -18.2 -4.59773 | opp_overlap 2992599 2992603 2992606 CATGGCAAAAACGCA GAAGGCGCCC CGCG GGGCGCCTTC TTTTTCGGCATCGAC TERM 2231 2992626 - 2992603 - T 86 -18.2 -2.84617 | opp_overlap 2992603, overlap 2992599 2992606 CATGGCAAAAACGCA GAAGGCGCCC CGCG GGGCGCCTTC TTTTTCGGCATCGAC TERM 2232 2992623 - 2992606 - T 86 -14.1 -3.5616 | opp_overlap 2992603, overlap 2992603 2992599 GGCAAAAACGCAGAA GGCGCCC CGCG GGGCGCC TTCTTTTTCGGCATC Pmen_2726 2993129 - 2992647 - | heat shock protein Hsp20 Pmen_2727 2994266 - 2993310 - | dihydrouridine synthase, DuS Pmen_2728 2994361 - 2994756 + | hypothetical protein Pmen_2729 2995212 - 2994763 - | thioesterase superfamily protein Pmen_2730 2995358 - 2997274 + | diguanylate cyclase Pmen_2731 2998083 - 2997244 - | hypothetical protein Pmen_2732 2998644 - 2998105 - | TetR family transcriptional regulator TERM 2233 2998776 - 2998801 + r 78 -16.1 -2.52676 | opp_overlap 2998776 2998793 AGGCAGAAACAAAAA GGGGCCGCCTC TGAA GAGGCAGCCCC TGGGTTCCGCAAATG TERM 2234 2998801 - 2998776 - R 100 -18.3 -5.38958 | opp_overlap 2998776, overlap 2998793 AGGCAGAAACAAAAA GGGGCCGCCTC TGAA GAGGCAGCCCC TGGGTTCCGCAAATG TERM 2235 2998851 - 2998828 - R 73 -5.2 -4.64334 | opp_overlap 2998841 AATGCGGCAAGAAAA TTGGCGTCCC CTAG GGGACTCGAA CCCCTGTTACCGCCG TERM 2236 2998944 - 2998920 - R 79 -15.8 -2.72855 | opp_overlap 2998923, overlap 2998923 GAAACCTTCGAACGA CAAGGCCAGC ACTAG GCTGGCCTTG AGTGTGATTGGTGGA TERM 2237 2998941 - 2998923 - R 74 -11.7 -3.51032 | opp_overlap 2998923, overlap 2998920 ACCTTCGAACGACAA GGCCAGC ACTAG GCTGGCC TTGAGTGTGATTGGT TERM 2238 2999191 - 2999167 - R 93 -16.5 -3.63837 | opp_overlap 2999160 2999170, overlap 2999170 AGAACCTTCGAAGAA CAAGGCCAGCA CTA CGCTGGCCTTG TCAGTGTTTGGTGGA TERM 2239 2999170 - 2999188 + r 74 -11.7 -3.45602 | opp_overlap 2999170 2999167, overlap 2999160 ACCTTCGAAGAACAA GGCCAGC ACTAC GCTGGCC TTGTCAGTGTTTGGT TERM 2240 2999188 - 2999170 - R 86 -12.4 -3.94877 | opp_overlap 2999160 2999170, overlap 2999167 ACCTTCGAAGAACAA GGCCAGCA CTA CGCTGGCC TTGTCAGTGTTTGGT gltX 3001195 - 2999714 - | glutamyl-tRNA synthetase Pmen_2734 3002150 - 3001230 - | LysR family transcriptional regulator TERM 2241 3001338 - 3001311 - G 70 -8.4 -3.96148 | GCTGGCGATGAGAAA GTCGAGGAAGGT CTTG ACCTTCATCGCC TGGAAGCGCCGCGAC TERM 2242 3002942 - 3002896 - g 88 -16.6 -3.64703 | TCTCGCGCACGCAAA TTCACGCGCCGATCAGCGGC ATGGTCG GCCAGCGCTCGGCGCGTGAA GGCCAGGTGGTGCAA Pmen_2735 3002259 - 3003308 + | secretion protein HlyD family protein Pmen_2736 3003298 - 3004851 + | EmrB/QacA family drug resistance transporter Pmen_2737 3006963 - 3004948 - | excinuclease ABC subunit B TERM 2243 3007017 - 3006980 - H 78 -9.9 -3.88291 | gap 1, opp_overlap 3006980 CAGCACCTCGACAAA TGGCTGT-GACGCATCCC TTC GGACTGCGTCAAAAGCCA TGAATTGCGGGGCGA Pmen_2738 3007212 - 3008408 + | aromatic amino acid aminotransferase TERM 2244 3008454 - 3008426 - T 85 -16.1 -3.1355 | opp_overlap 3008431, overlap 3008431 TTCAGTGACACCCAA GAAAACGCCGGCT CAT AGCCGGCGTTTTT CTATGCGTGGGTTTT TERM 2245 3008449 - 3008431 - T 100 -16 -4.70169 | opp_overlap 3008431, overlap 3008426 TGACACCCAAGAAAA CGCCGGCT CAT AGCCGGCG TTTTTCTATGCGTGG TERM 2246 3008431 - 3008449 + T 100 -16 -4.99035 | opp_overlap 3008426 3008431 TGACACCCAAGAAAA CGCCGGCT CAT AGCCGGCG TTTTTCTATGCGTGG TERM 2247 3008522 - 3008553 + T 85 -18 -2.52464 | opp_overlap 3008514 GAGGTAAGCCCTCGG TGCGCGCGGCGCTC CTGC GAGGGCCGTGCGCA TCGCTTCACGCCGAG Pmen_2739 3009479 - 3008559 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Pmen_2740 3009654 - 3010946 + | citrate transporter Pmen_2741 3011285 - 3011881 + | isochorismatase hydrolase Pmen_2742 3011962 - 3012282 + | hypothetical protein Pmen_2743 3012392 - 3012949 + | Smr protein/MutS2 folE 3013035 - 3013580 + | GTP cyclohydrolase I TERM 2248 3013590 - 3013627 + F 93 -15.5 -3.57561 | opp_overlap 3013593, overlap 3013591 CGCTGATCCCGCTCA AGACGACGGCCGCTCAC TTCG GTGAACGGCCGTCGGCA TTTCAGGAGTTAGAA TERM 2249 3013591 - 3013626 + F 88 -19 -2.74322 | opp_overlap 3013593, overlap 3013590 GCTGATCCCGCTCAA GACGACGGCCGCTCAC TTCG GTGAACGGCCGTCGGC ATTTCAGGAGTTAGA TERM 2250 3013624 - 3013593 - f 100 -22.4 -3.02144 | opp_overlap 3013591 3013590 TGATCCCGCTCAAGA CGACGGCCGCTCAC TTCG GTGAACGGCCGTCG GCATTTCAGGAGTTA TERM 2251 3013962 - 3013944 - g 70 -6.6 -4.2828 | GCGCATCGAGGAAAA CGGCCAGA GCA CCTGGCTG TACGAGTCCAAGGCG Pmen_2745 3013645 - 3014013 + | glutaredoxin ligA 3016513 - 3014153 - | NAD-dependent DNA ligase LigA TERM 2252 3016533 - 3016554 + r 82 -8.7 -4.31688 | opp_overlap 3016535, overlap 3016535 AGTCTCTCAAACGAA AAGAGCAGC CTTG GCTGCTCTC TTTTGACTTCGTGTT TERM 2253 3016552 - 3016535 - R 95 -11.3 -4.54727 | opp_overlap 3016535 3016533 TCTCTCAAACGAAAA GAGCAGC CTTG GCTGCTC TCTTTTGACTTCGTG TERM 2254 3016535 - 3016552 + r 80 -11.3 -3.75051 | opp_overlap 3016535, overlap 3016533 TCTCTCAAACGAAAA GAGCAGC CTTG GCTGCTC TCTTTTGACTTCGTG zipA 3017395 - 3016574 - | cell division protein ZipA TERM 2255 3017449 - 3017432 - R 85 -4.1 -5.40072 | TTCTGGTGAAAAAAA GATCCAA TCAA CCGGATC ACAACTTGACTATAA Pmen_2748 3021054 - 3017566 - | condensin subunit Smc TERM 2256 3017986 - 3017976 - G 77 -4 -4.72272 | TGCCGCCACCAAAAA CTTT TGG AAAG AGTGCCTGCAAACCG TERM 2257 3018991 - 3019029 + g 73 -14.4 -3.18681 | CTGCTCGCGCAGCTC CTCCTGACGGCGCTGCTC GTC GCGCAGCGCCAGCAGGCG TTCATCCAGTTGCGC TERM 2258 3019705 - 3019725 + g 87 -16.9 -3.4052 | CAGGGCTTCGTGCTC CAGCTCGCC GGC GGCGAGCTG TTCGTTCAGTTCGAG Pmen_2749 3021720 - 3021061 - | GntR family transcriptional regulator Pmen_2750 3021953 - 3023086 + | alkane 1-monooxygenase TERM 2259 3023113 - 3023136 + F 100 -13.8 -5.11836 | CCCTCCCCATCCCAA CCCCGGCAGC GCAG GCTCCCGGGG TTTTGTTTTGGCTAT Pmen_2751 3023473 - 3024912 + | molybdopterin dehydrogenase, FAD-binding TERM 2260 3025668 - 3025685 + G 72 -8.3 -4.07568 | overlap 3025669 GATCGTCATCGACAT GCGCCGC ATGG GCGGCGG TTTTGGCGGCAAGGA TERM 2261 3025730 - 3025703 - g 84 -13.4 -3.90112 | gap 1, opp_overlap 3025707 TTGGCGGCAAGGAAA CCCAGGC-CGCCG GCC CGGCGTGCCTGTG TGCAGTGATCGCGCA Pmen_2752 3024940 - 3027336 + | xanthine oxidase Pmen_2753 3027618 - 3028448 + | molybdenum cofactor sulfurylase Pmen_2754 3028619 - 3029920 + | guanine deaminase TERM 2262 3030042 - 3030005 - T 95 -20.7 -3.1505 | opp_overlap 3030005 3030012, overlap 3030012 AGGATTCGCTACGAA CGAAAAAGCCCCGCTGC GCGA GCAGCGGGGCTTTCTTG TTACGTGCAACGAAT TERM 2263 3030005 - 3030042 + T 95 -20.7 -3.05463 | opp_overlap 3030005 3030012, overlap 3030012 AGGATTCGCTACGAA CGAAAAAGCCCCGCTGC GCGA GCAGCGGGGCTTTCTTG TTACGTGCAACGAAT TERM 2264 3030035 - 3030012 - T 100 -19.6 -4.90266 | opp_overlap 3030005 3030012, overlap 3030005 GCTACGAACGAAAAA GCCCCGCTGC GCGA GCAGCGGGGC TTTCTTGTTACGTGC TERM 2265 3030012 - 3030035 + T 100 -19.6 -4.46854 | opp_overlap 3030012 3030005, overlap 3030005 GCTACGAACGAAAAA GCCCCGCTGC GCGA GCAGCGGGGC TTTCTTGTTACGTGC Pmen_2755 3030824 - 3030057 - | GntR family transcriptional regulator Pmen_2756 3031407 - 3032747 + | xanthine/uracil/vitamin C permease TERM 2266 3032771 - 3032791 + T 100 -15.4 -4.58773 | opp_overlap 3032756 3032771 CCTTCGTTGATCGAA GCCCCGGC CTTGT GCCGGGGC TTTTCGTTTGGTCGC TERM 2267 3032791 - 3032771 - T 83 -15.4 -3.05384 | opp_overlap 3032771, overlap 3032756 CCTTCGTTGATCGAA GCCCCGGC CTTGT GCCGGGGC TTTTCGTTTGGTCGC TERM 2268 3032984 - 3032966 - T 100 -8.8 -5.58454 | CGCAGACGAAAAAAA GCCCGC AGTGTGA GCGGGC GTAAGGACTCGAACG Pmen_2757 3033404 - 3033051 - | transthyretin TERM 2269 3033872 - 3033891 + G 70 -13.6 -2.94695 | overlap 3033868 CCATCCGCACTGGCC GGGCGATG CCCG CATCGCCC TGTCCTTCGTGCTCA Pmen_2758 3033807 - 3034733 + | chitin deacetylase Pmen_2759 3034730 - 3035260 + | hypothetical protein TERM 2270 3035392 - 3035339 - g 70 -10.1 -3.72893 | opp_overlap 3035345 3035346, overlap 3035342 GAGCCCCTGAGCAAA GAAGCCTTCGCCGCCTTCGGTGACG TGAT CGAAACCGACGGCAGCGACTTCTTC ATGATCAACAACGGC Pmen_2760 3035306 - 3035809 + | ureidoglycolate hydrolase Pmen_2761 3035857 - 3037149 + | hypothetical protein TERM 2271 3037158 - 3037187 + F 100 -12.1 -4.82901 | opp_overlap 3037160, overlap 3037160 CAACTGATTGCCACA CATGCCGCGCCCG CGAA TGGGTGCGGCATC TTTTTATCCCCGCCC TERM 2272 3037160 - 3037185 + F 95 -14.7 -4.03995 | opp_overlap 3037160, overlap 3037158 ACTGATTGCCACACA TGCCGCGCCCG CGAA TGGGTGCGGCA TCTTTTTATCCCCGC TERM 2273 3037248 - 3037282 + F 100 -20.9 -5.24531 | gap 1, opp_overlap 3037252 GCAACACCTCCCCCA TGAACCGCCGG-CAGC GAAA GCTGACCGGCGGTTCA TTTTTTGTGCACAAT TERM 2274 3037278 - 3037252 - f 85 -15.9 -3.14344 | gap 1, opp_overlap 3037248 CACCTCCCCCATGAA CCGCCGG-CAGC GAAA GCTGACCGGCGG TTCATTTTTTGTGCA Pmen_2762 3037449 - 3038951 + | uracil-xanthine permease TERM 2275 3038971 - 3038994 + F 72 -11.7 -3.36492 | CTTTTACCCTTACCC CTCCCGGTG CTGCGC CGCCGGGAG TTGTCCGCTTGCACG Pmen_2763 3039029 - 3039889 + | nucleoside-binding outer membrane protein-like protein TERM 2276 3039972 - 3039945 - f 100 -18.4 -4.56597 | opp_overlap 3039945 GCGGCCGGGTAAAAA GGGGGATGGGCG TTCG CGCCCTTCCCCC TTTTTCTTTGCACCG TERM 2277 3039945 - 3039972 + F 100 -18.4 -5.27335 | opp_overlap 3039945 GCGGCCGGGTAAAAA GGGGGATGGGCG TTCG CGCCCTTCCCCC TTTTTCTTTGCACCG TERM 2278 3039995 - 3040048 + F 86 -13.1 -3.85817 | gap 1, opp_overlap 3039991 3039994 3039993 TTGCACCGAAAGATG GGCGGTGCACACGGC-CATCTACC TCGGGCC GCAGGGTGCGCCGTGCGCACCGCC TTTATCAAACCGGCT TERM 2279 3040170 - 3040186 + F 72 -3 -4.72986 | gap 1, opp_overlap 3040170, overlap 3040170 3040171 CTTGCAAGCACGCAA C-TGACC GCAA GGTCAAG TTTTTGATCACAATA Pmen_2764 3040321 - 3041874 + | permease for cytosine/purine, uracil, thiamine, allantoin TERM 2280 3042062 - 3042093 + T 100 -18 -4.59773 | opp_overlap 3042068, overlap 3042064 AGCCCTTATCGAGTG GACGAAGCCGGCGC CTGC GCGCCGGCTTTGGC TTTTTGGCGCTCGAA TERM 2281 3042064 - 3042091 + T 88 -19.2 -2.61004 | opp_overlap 3042068, overlap 3042062 CCCTTATCGAGTGGA CGAAGCCGGCGC CTGC GCGCCGGCTTTG GCTTTTTGGCGCTCG TERM 2282 3042087 - 3042068 - T 85 -16.4 -3.16881 | opp_overlap 3042064 3042062 TATCGAGTGGACGAA GCCGGCGC CTGC GCGCCGGC TTTGGCTTTTTGGCG Pmen_2765 3042891 - 3042052 - | hypothetical protein Pmen_2766 3043931 - 3042936 - | molybdenum cofactor biosynthesis protein A TERM 2283 3043949 - 3043963 + H 84 -5.6 -4.9218 | CGGGTCTCCTGCAGC GTCACG CGC CGAGAC TTTTTGTCATGGATG Pmen_2767 3044144 - 3044788 + | TetR family transcriptional regulator TERM 2284 3045350 - 3045319 - T 86 -13.6 -3.53811 | overlap 3045290 CGCACCGGCGGTAAA GCCGGTGCGCACGG CACA CCCTACGCCCCGGC ATCCGCCTTCAGGCC Pmen_2768 3045773 - 3045339 - | hypothetical protein TERM 2285 3046008 - 3045992 - H 78 -6.5 -4.64861 | GCGTTTTAAAAGAAA TCCGCCG CGG CGACAGA CTGCCTCGGAAAAAA Pmen_2769 3046105 - 3047880 + | glyoxylate carboligase TERM 2286 3048732 - 3048708 - g 73 -10.7 -3.65812 | opp_overlap 3048727, overlap 3048719 CGGCTGTGAATACAA GCCGGCAAC CACCACC GCTGCCGGC CTCGGCTGGATGGCT Pmen_2770 3047983 - 3048780 + | hydroxypyruvate isomerase Pmen_2771 3048794 - 3049684 + | 2-hydroxy-3-oxopropionate reductase TERM 2287 3049747 - 3049689 - f 95 -20.5 -2.82895 | gap 2, opp_overlap 3049730, overlap 3049688 GCGGCGAGTAACAAG GCGGTGCGCGCGGCGCACCCTACGG GGTATCGCGAG CCGTAGGGTGCGCCGTGCGCACC-- GACCAGCCGGATCGC Pmen_2772 3049983 - 3051257 + | glycerate 2-kinase Pmen_2773 3051254 - 3052669 + | pyruvate kinase Pmen_2774 3052914 - 3053825 + | Urea transporter TERM 2288 3053951 - 3053962 + F 71 -5.8 -4.36914 | overlap 3053942 GCCATCGCCGTTTCG CCTG TTGT CAGG TTTTGTCGAGGGGCG Pmen_2775 3053983 - 3055008 + | DNA topoisomerase Pmen_2776 3056735 - 3055272 - | RND efflux system outer membrane lipoprotein TERM 2289 3055750 - 3055718 - G 74 -12.8 -3.55622 | gap 2 TCGAAGCGCTGGAAA TGGCGTCGCCCAGGGC GAA GCCC-GAGCGAC-CCA CGGCGGCCTGCACCG Pmen_2777 3059776 - 3056732 - | acriflavin resistance protein Pmen_2778 3060860 - 3059781 - | RND family efflux transporter MFP subunit TERM 2290 3060245 - 3060276 + g 93 -18.8 -3.43492 | TCAGCGCGGCGCTTT CCGGCAGATCGACG CCGA CCTCGATCTGCCGG TTGTCCTGCATCTCG TERM 2291 3060717 - 3060691 - G 77 -10.7 -3.87075 | ACCACCCCGGAGAAA CGCAGCGCCTC GGCCT GCGGCGCGGCG GGCTGCAGCGGCTCG Pmen_2779 3061289 - 3061672 + | hypothetical protein Pmen_2780 3061756 - 3062610 + | Ion transport protein TERM 2292 3062770 - 3062804 + G 72 -12 -3.53091 | GGGCCCCTTGCTGCT GCTCGCCTGCCTGCTC ACC GATCCGCCGGGCGAGC TTTCCAGCGCCGCCT Pmen_2781 3062693 - 3064150 + | anion transporter TERM 2293 3064204 - 3064163 - T 86 -18.1 -2.81464 | opp_overlap 3064175, overlap 3064169 3064175 TGAGCACGGATCACA GCCAAACAACAACGGCGCC CAAG GGCGCCGTTTTCGTTTGGA GGCAACAGGTAACGC TERM 2294 3064198 - 3064169 - T 93 -14.3 -3.727 | opp_overlap 3064175, overlap 3064163 3064175 CGGATCACAGCCAAA CAACAACGGCGCC CAAG GGCGCCGTTTTCG TTTGGAGGCAACAGG TERM 2295 3064192 - 3064175 - T 95 -14.1 -4.11346 | opp_overlap 3064175, overlap 3064169 3064163 ACAGCCAAACAACAA CGGCGCC CAAG GGCGCCG TTTTCGTTTGGAGGC TERM 2296 3064175 - 3064192 + T 100 -14.1 -4.54727 | opp_overlap 3064169 3064163 3064175 ACAGCCAAACAACAA CGGCGCC CAAG GGCGCCG TTTTCGTTTGGAGGC Pmen_2782 3064589 - 3064224 - | hypothetical protein Pmen_2783 3065797 - 3064586 - | TPR repeat-containing protein Pmen_2784 3066282 - 3065794 - | cytochrome C biogenesis protein Pmen_2785 3066818 - 3066279 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Pmen_2786 3068788 - 3066815 - | cytochrome c-type biogenesis protein CcmF Pmen_2787 3069270 - 3068785 - | cytochrome c-type biogenesis protein CcmE Pmen_2788 3069443 - 3069267 - | Heme exporter protein D (CcmD) Pmen_2789 3070195 - 3069440 - | heme exporter protein CcmC Pmen_2790 3070954 - 3070283 - | heme exporter protein CcmB Pmen_2791 3071595 - 3070951 - | cytochrome c biogenesis protein CcmA Pmen_2792 3071793 - 3073322 + | hypothetical protein Pmen_2793 3073319 - 3073663 + | flagellar protein FhlB-like protein Pmen_2794 3074087 - 3073644 - | rhodanese domain-containing protein Pmen_2795 3074653 - 3074246 - | hypothetical protein Pmen_2796 3075132 - 3074653 - | putative CheW protein TERM 2297 3075174 - 3075153 - R 76 -6.5 -4.57341 | gap 1, opp_overlap 3075170 AAGCCTCGTCAAAAA CCGCTCA-GC GCG GCATGTGCGG GTCGACCCGCCTGTC Pmen_2797 3076025 - 3075228 - | putative CheW protein Pmen_2798 3076901 - 3076113 - | cobyrinic acid a,c-diamide synthase Pmen_2799 3077793 - 3076984 - | flagellar motor protein MotD motC 3078546 - 3077806 - | flagellar motor protein Pmen_2801 3079699 - 3078572 - | chemotaxis-specific methylesterase TERM 2298 3079170 - 3079156 - G 72 -11.4 -3.53012 | TGGGCGCGGGCGAAA CCGGTG CGG CACCGG AAGACGCCGGCGCGG TERM 2299 3079229 - 3079175 - G 74 -14.7 -3.05844 | TGCGGCACCGGAAGA CGCCGGCGCGGGGCGCGGGGCGACC GAGGG AGCCGCCGGGCGCGCCGAGGCGGCA GGACGACTAGTCGGC Pmen_2802 3081955 - 3079742 - | CheA signal transduction histidine kinase TERM 2300 3080491 - 3080513 + g 83 -12.6 -4.14472 | opp_overlap 3080485 CTGACAGCACCACGC GGCCGGCGCG GGC CTTGCCGGCC TTTTCGCGCTCTTCC TERM 2301 3081001 - 3081031 + g 73 -11.1 -3.64703 | overlap 3081001 CCGCAGCAGGTTTTG CC-GCAGCCGCTGGC TTG GCC-GCGGCGGCCGG TTTGGCTGCGGGCGC TERM 2302 3081482 - 3081539 + g 72 -14.2 -3.01712 | gap 3, opp_overlap 3081508 3081509, overlap 3081485 CTCGCTGTCGGTGAT GTCGCCGGAGGCGGCAGGCGCGGAAACCG GAG CGGGTTCCG-GC-T-CCGCTTCCGGCTCC TGTTCGGGGGCAGCC TERM 2303 3081485 - 3081536 + g 87 -18.9 -2.73875 | gap 3, opp_overlap 3081508 3081509, overlap 3081482 GCTGTCGGTGATGTC GCCGGAGGCGGCAGGCGCGGAAACCG GAG CGGGTTCCG-GC-T-CCGCTTCCGGC TCCTGTTCGGGGGCA Pmen_2803 3082756 - 3081968 - | chemotaxis phosphatase, CheZ TERM 2304 3082767 - 3082782 + r 70 -10.4 -3.55444 | TCCATAGCACCCTCG CGGCTG ACAT CAGCCG TTTACCCGCTCGAAG Pmen_2804 3083195 - 3082776 - | response regulator receiver protein fliA 3083974 - 3083228 - | flagellar biosynthesis sigma factor Pmen_2806 3084801 - 3083971 - | cobyrinic acid a,c-diamide synthase flhF 3086205 - 3084892 - | flagellar biosynthesis regulator FlhF TERM 2305 3085848 - 3085881 + g 74 -12.3 -3.53811 | gap 1, overlap 3085823 GATCGACCGCCGGGG CCGCGGCAGGCG-CCG GCT CGGCCGCGCGCTGCGG TTTGACCGGCGTGGC flhA 3088364 - 3086217 - | flagellar biosynthesis protein FlhA flhB 3089585 - 3088449 - | flagellar biosynthesis protein FlhB TERM 2306 3089542 - 3089554 + g 79 -3.3 -5.00616 | overlap 3089532 TCGAGCCGCTTACTG GTGGG TTC CTCGC TTTTTTCGGCACCGC fliR 3090371 - 3089595 - | flagellar biosynthesis protein FliR fliQ 3090654 - 3090385 - | flagellar biosynthesis protein FliQ fliP 3091451 - 3090666 - | flagellar biosynthesis protein FliP Pmen_2813 3091882 - 3091451 - | flagellar biosynthesis protein, FliO fliN 3092352 - 3091885 - | flagellar motor switch protein fliM 3093363 - 3092392 - | flagellar motor switch protein FliM fliL 3093898 - 3093377 - | flagellar basal body-associated protein FliL TERM 2307 3093870 - 3093883 + g 80 -9.5 -4.20768 | CCGGGTTGTCCGTCG GCGGC CGGT GCCGC TTCTTTCTTAGCCAT TERM 2308 3094033 - 3094078 + r 79 -13.1 -3.54424 | opp_overlap 3094036, overlap 3094034 TTGCTGTCACCTCAA AAAGCATTCGCCCGGGCGACC TTTC GGCCACCCGGGCGAATGCAAG TTTAGCGGAGTGACG TERM 2309 3094034 - 3094077 + r 84 -16.6 -2.72511 | opp_overlap 3094036, overlap 3094033 TGCTGTCACCTCAAA AAGCATTCGCCCGGGCGACC TTTC GGCCACCCGGGCGAATGCAA GTTTAGCGGAGTGAC TERM 2310 3094075 - 3094036 - R 100 -28 -4.62069 | opp_overlap 3094034 3094033 CTGTCACCTCAAAAA GCATTCGCCCGGGCGACC TTTC GGCCACCCGGGCGAATGC AAGTTTAGCGGAGTG Pmen_2817 3095355 - 3094129 - | flagellar hook-length control protein Pmen_2818 3095803 - 3095420 - | Hpt protein Pmen_2819 3097491 - 3095803 - | response regulator receiver protein Pmen_2820 3097799 - 3097494 - | anti-sigma-factor antagonist fliJ 3098332 - 3097883 - | flagellar biosynthesis chaperone fliI 3099704 - 3098358 - | flagellum-specific ATP synthase fliH 3100494 - 3099694 - | flagellar assembly protein H TERM 2311 3100433 - 3100417 - G 72 -13.7 -3.06183 | GCCAGGCGCATCGAA GCTGGGC AGC GCCCAGC GATCGAACGTACCCA fliG 3101779 - 3100763 - | flagellar motor switch protein G fliF 3103556 - 3101772 - | flagellar MS-ring protein fliE 3103896 - 3103567 - | flagellar hook-basal body protein FliE TERM 2312 3104050 - 3104072 + r 70 -10.5 -3.55444 | opp_overlap 3104046 3104051 3104053, overlap 3104051 3104053 TGAGACAGCAAGACG ACAGGCGGG GATGA CCCGCCTGG TTTCGGGCATGCGCA TERM 2313 3104071 - 3104051 - R 73 -14 -2.80035 | opp_overlap 3104050 3104051 3104053, overlap 3104046 3104053 GAGACAGCAAGACGA CAGGCGGG GATGA CCCGCCTG GTTTCGGGCATGCGC TERM 2314 3104051 - 3104071 + r 73 -14 -2.73124 | opp_overlap 3104051 3104046 3104053, overlap 3104050 3104053 GAGACAGCAAGACGA CAGGCGGG GATGA CCCGCCTG GTTTCGGGCATGCGC Pmen_2827 3105508 - 3104096 - | two component, sigma54 specific, Fis family transcriptional regulator Pmen_2828 3106741 - 3105512 - | PAS/PAC sensor signal transduction histidine kinase TERM 2315 3106864 - 3106831 - R 100 -14 -5.04987 | opp_overlap 3106835 3106858, overlap 3106835 AACAGGTTGAAAAAA CAAAGCCGGAGCTT GCGTCA AAGCTCCGGCTCTA TTGGGCCTTTCCGCC TERM 2316 3106860 - 3106835 - R 100 -14.8 -5.04249 | opp_overlap 3106835 3106858, overlap 3106831 GGTTGAAAAAACAAA GCCGGAGCTT GCGTCA AAGCTCCGGC TCTATTGGGCCTTTC TERM 2317 3106835 - 3106860 + r 80 -14.8 -3.09581 | opp_overlap 3106831 3106835, overlap 3106858 GGTTGAAAAAACAAA GCCGGAGCTT GCGTCA AAGCTCCGGC TCTATTGGGCCTTTC Pmen_2829 3108367 - 3106892 - | sigma-54 dependent trancsriptional regulator TERM 2318 3108425 - 3108402 - R 73 -13.2 -2.72591 | gap 1, overlap 3108397 3108401 AGGAGTGAAAGGAAC TGCGCGCC-AG ATC CTCGGCGCGCA CCGGCAATTGGCCAC TERM 2319 3108614 - 3108583 - R 70 -13 -2.92091 | AGAGCGATGGAGACA TTCCGGGCCGAACC AGCC GGTCGAGCCCGGAA AATGCGGCGAAATCA Pmen_2830 3108920 - 3108627 - | hypothetical protein fliS 3109325 - 3108945 - | flagellar protein FliS Pmen_2832 3109790 - 3109398 - | flagellar protein FliS Pmen_2833 3111253 - 3109790 - | flagellar hook-associated 2 domain-containing protein Pmen_2834 3111725 - 3111333 - | flagellar protein FlaG protein TERM 2320 3111785 - 3111742 - R 72 -11 -3.29043 | gap 1, opp_overlap 3111739 3111738 3111750, overlap 3111750 AATTGCTCCTCACAA TGAGGTAACGGGGGGAAGAGC CAA GCCCTTCCCCCCGTAGTCT-A GCGCTTTCGACCTTA TERM 2321 3111778 - 3111750 - R 100 -22.5 -3.14963 | opp_overlap 3111750 3111739 3111738, overlap 3111742 CTCACAATGAGGTAA CGGGGGGAAGAGC CAA GCCCTTCCCCCCG TAGTCTAGCGCTTTC TERM 2322 3111750 - 3111778 + r 95 -20.3 -2.64107 | opp_overlap 3111742 3111750, overlap 3111739 3111738 CTCACAATGAGGTAA CGGGGGGAAGAGC CAA GCCCTTCCCCCCG TAGTCTAGCGCTTTC Pmen_2835 3113276 - 3111798 - | flagellin domain-containing protein TERM 2323 3113491 - 3113523 + r 77 -12 -3.61178 | opp_overlap 3113482 GATAATTTGGCGGGA TTCCGACGGGCAAT TGGCC ATTGCCCGCCGGCA TTTCACATCAATCCG Pmen_2836 3118810 - 3113531 - | glycosyl transferase family protein TERM 2324 3118467 - 3118491 + g 70 -10.8 -3.57144 | gap 1, opp_overlap 3118457 3118467 AGAACCCCCATCAGA CTGACG-GCGT CAAA ACGCTCGTCAG TTTGAAACTCGAAAA Pmen_2837 3119465 - 3118803 - | nucleotidyl transferase Pmen_2838 3120046 - 3119441 - | HAD family hydrolase Pmen_2839 3120813 - 3120043 - | methyltransferase type 12 flgL 3122642 - 3120954 - | flagellar hook-associated protein FlgL flgK 3124756 - 3122711 - | flagellar hook-associated protein FlgK flgJ 3125950 - 3124766 - | peptidoglycan hydrolase TERM 2325 3124916 - 3124928 + g 72 -6.9 -4.25104 | CTCGGGGTTCTCGGT GGCGT TCA GCGCC TTTTCGTAGCGCCCA TERM 2326 3125278 - 3125325 + g 72 -14 -3.03159 | gap 1, opp_overlap 3125269 3125267 TGAACACGGCCTTGC CCGGCGCCAGCGGCGGCTGGGCG ATG CGC-CGGCCGCTGATGGCATCGC TGTTGCCCGGGTTCA flgI 3127125 - 3125965 - | flagellar basal body P-ring protein TERM 2327 3127165 - 3127125 - G 75 -15.3 -2.78384 | GCCGGCGGCAGGACA CGCCCTGCTCCGACTGCGC CTT GCGCAGCGGGCGCAAGGCC TGCTGCCGCGGGCGA flgH 3128030 - 3127308 - | flagellar basal body L-ring protein flgG 3128855 - 3128070 - | flagellar basal body rod protein FlgG flgF 3129642 - 3128902 - | flagellar basal body rod protein FlgF TERM 2328 3129814 - 3129834 + r 100 -16.9 -3.54424 | opp_overlap 3129814 CTCCGCAACGGCAAA GCGGCAAGC CTG GCTTGCCGC TTTGCCGCCGTCGGC TERM 2329 3129834 - 3129814 - R 100 -16.9 -3.66178 | opp_overlap 3129814 CTCCGCAACGGCAAA GCGGCAAGC CTG GCTTGCCGC TTTGCCGCCGTCGGC flgE 3131213 - 3129897 - | flagellar hook protein FlgE flgD 3131915 - 3131250 - | flagellar basal body rod modification protein flgC 3132380 - 3131937 - | flagellar basal body rod protein FlgC flgB 3132799 - 3132392 - | flagellar basal body rod protein FlgB TERM 2330 3132921 - 3132945 + r 84 -11.4 -4.07568 | opp_overlap 3132921 3132918 TCACTTGATAACCGA GCGGCAAGCG GCAAG CGCTTTCCGC TTTTCCCCCACGAGC TERM 2331 3133095 - 3133074 - R 100 -13.7 -4.5852 | opp_overlap 3133073 3133074 CAACGCAAACGAAAA CGGGAGACC CTGA GGCCTCCCG CTTGTCGCCGATCAT Pmen_2851 3133970 - 3133122 - | MCP methyltransferase, CheR-type Pmen_2852 3134927 - 3133995 - | putative CheW protein flgA 3135005 - 3135763 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 2332 3135960 - 3135926 - g 79 -12.9 -3.62522 | gap 1, overlap 3135927 CAACCGGCTGAACAA TGCCAATACGC-CCGC CAAT GCGGGGCGTACTGGCG CCACTCAGGCTGGCA TERM 2333 3135959 - 3135927 - g 77 -16.4 -2.77192 | gap 1, overlap 3135926 AACCGGCTGAACAAT GCCAATACGC-CCGC CAAT GCGGGGCGTACTGGC GCCACTCAGGCTGGC TERM 2334 3136051 - 3136033 - g 70 -6.6 -4.258 | overlap 3136034 GTAGCGATGAACAAA CCACCGCC AAG AGCGGCGA ATCCGTGCAACTGAG Pmen_2854 3135897 - 3136232 + | anti-sigma-28 factor, FlgM Pmen_2855 3136283 - 3136750 + | FlgN family protein Pmen_2856 3136845 - 3137594 + | type IV pilus assembly PilZ Pmen_2857 3138911 - 3137601 - | major facilitator transporter Pmen_2858 3140306 - 3138963 - | glutamate--putrescine ligase Pmen_2859 3140586 - 3141809 + | serine/threonine transporter SstT Pmen_2860 3141964 - 3142731 + | ABC transporter related Pmen_2861 3143485 - 3142742 - | ferric iron reductase TERM 2335 3143470 - 3143451 - G 75 -3.4 -4.79223 | overlap 3143452 CGATACGAGGAAAAA TCGCCGAT GAAC AGCGGCGC CAGTGCCTCAATCAC Pmen_2862 3144493 - 3143507 - | hypothetical protein TERM 2336 3143560 - 3143534 - G 90 -6.4 -5.14563 | opp_overlap 3143556 3143557, overlap 3143536 CCCGCTATCAAAAAA GCGCTCGCGACC GAT GGCCATCAGCGC CGCGCGCTTGTGAGG Pmen_2863 3145476 - 3144490 - | taurine catabolism dioxygenase TauD/TfdA Pmen_2864 3145702 - 3145502 - | MbtH domain-containing protein Pmen_2865 3146702 - 3145791 - | periplasmic binding protein Pmen_2866 3148749 - 3146713 - | iron-hydroxamate transporter permease subunit TERM 2337 3147286 - 3147262 - G 70 -11.3 -3.59979 | GCCGCTGATGGCAAA GCCGGTGAGCG TCA CGCGCAGCGGC TCCAGGCCGTGACGC TERM 2338 3148732 - 3148706 - G 75 -11.5 -3.69323 | CCAGCATGACCGAAA CCACGGGCAGC GGCAG ACTGCCCGGGG CGACTCAAACTCGTC TERM 2339 3148795 - 3148774 - R 100 -13.7 -4.67353 | opp_overlap 3148770 3148774 TTACTTATGCAAAAA GGCGAAGGG TGTC CCCCTCGCC TTGGTTTGCTCACTC TERM 2340 3148774 - 3148795 + r 77 -11.5 -3.57418 | opp_overlap 3148774, overlap 3148770 TTACTTATGCAAAAA GGCGAAGGG TGTC CCCCTCGCC TTGGTTTGCTCACTC Pmen_2867 3151021 - 3148820 - | TonB-dependent siderophore receptor Pmen_2868 3152691 - 3151270 - | diaminobutyrate--2-oxoglutarate aminotransferase Pmen_2869 3168667 - 3152681 - | amino acid adenylation domain-containing protein Pmen_2870 3178359 - 3168664 - | amino acid adenylation domain-containing protein TERM 2341 3174210 - 3174263 + g 75 -9.6 -4.11216 | gap 3, opp_overlap 3174195 3174193 3174192 3174242 GGGCATGCGCAGGTA TCG-CACG-CTCACCTGCGCCGGCCTG CAG CAGACCGGC-CAGGTGGGTCGGCACGA TTTTGAGAATGCCGA Pmen_2871 3179733 - 3178417 - | lysine/ornithine N-monooxygenase-like protein TERM 2342 3179904 - 3179875 - R 100 -20.1 -4.57569 | gap 1, overlap 3179878 TCACTTCGGCAAAAA CGACTGCGCCCGCA TGA TGCGGGCGCAG-CG AGGGCAATCGGCATT TERM 2343 3179902 - 3179878 - R 100 -21.5 -3.23708 | overlap 3179875 CTTCGGCAAAAACGA CTGCGCCCGCA TGA TGCGGGCGCAG CGAGGGCAATCGGCA Pmen_2872 3181595 - 3179919 - | cyclic peptide transporter Pmen_2873 3182228 - 3181596 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2344 3182524 - 3182570 + r 79 -7.9 -4.46212 | opp_overlap 3182511 AGGGGACCCAGCCCG GCGAGCGGTGTCGCAAAGG CCGGGCGCA TCTTAGCGGCGTCGCGCGC TTTTGTCATGCCGCA Pmen_2874 3184056 - 3182662 - | sodium:neurotransmitter symporter TERM 2345 3184116 - 3184169 + r 100 -18.9 -3.7104 | gap 1, opp_overlap 3184094 3184095, overlap 3184096 3184097 GTGGTCGGGCCACCC CGCTTGGTGCGCACGACGCACCTCAT CTC GTAGGGTGCGCCATGCGCACCA-GCG TTATTGCCTATCCAT Pmen_2875 3185246 - 3184188 - | Glu/Leu/Phe/Val dehydrogenase, dimerisation region TERM 2346 3185307 - 3185275 - R 84 -11.2 -4.14243 | gap 1, overlap 3185276 TATCGGATTGTAAAA GGCCGCCCCGCTCCC AGAC GGGAG-GGGGTGGCA AGGGGTGACGGGGAA TERM 2347 3185306 - 3185276 - R 80 -14.7 -3.08224 | gap 1, overlap 3185275 ATCGGATTGTAAAAG GCCGCCCCGCTCCC AGAC GGGAG-GGGGTGGC AAGGGGTGACGGGGA Pmen_2876 3188793 - 3185326 - | indolepyruvate ferredoxin oxidoreductase Pmen_2877 3188980 - 3189459 + | AsnC family transcriptional regulator phnP 3190352 - 3189588 - | carbon-phosphorus lyase complex accessory protein Pmen_2879 3190951 - 3190343 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Pmen_2880 3192096 - 3190951 - | phosphonate metabolism protein PhnM Pmen_2881 3192802 - 3192086 - | phosphonate C-P lyase system protein PhnL phnK 3193793 - 3192984 - | phosphonates transport ATP-binding protein TERM 2348 3193759 - 3193743 - G 75 -13.7 -3.29511 | GTCACGCGCCGAGAA CAGCGGC TCG GCCGCTG CCACGGCAGGTTGCA Pmen_2883 3194659 - 3193790 - | phosphonate metabolism PhnJ Pmen_2884 3195735 - 3194659 - | phosphonate metabolism phnH 3196346 - 3195735 - | carbon-phosphorus lyase complex subunit TERM 2349 3195859 - 3195834 - G 74 -12.6 -3.57462 | gap 1, overlap 3195813 CAGGCCACGGGGAAA GGC-GCAGCGC GCCTG GCGCTGCTGCC AGAACGAGGCCGGCA TERM 2350 3196202 - 3196167 - G 74 -10.2 -3.85698 | GTCGCTGTCGAGAAA GGCCAGGCACAGGCCA TAGG TGGCCGGGGCCAGGTC GCCCAAGGCGTGGGC Pmen_2886 3196807 - 3196346 - | phosphonate metabolism PhnG Pmen_2887 3197529 - 3196807 - | GntR family transcriptional regulator TERM 2351 3197539 - 3197522 - G 78 -9.8 -4.08767 | opp_overlap 3197516 TTCATCGTTTGAAAA GGGCGC ACGCGG GCGCCC TCCTCCTCCTTCAGA Pmen_2888 3198341 - 3197550 - | phosphonate ABC transporter, inner membrane subunit TERM 2352 3198407 - 3198361 - R 89 -12.3 -4.08216 | gap 1, overlap 3198362 3198364 GTATCTCGGGGAAAA CGACTGCAGTCAGCCCCTCGGT TGAT ACCGAGGGGCTGCCAGGA-TCA ACCGGCGCTGGCGCC TERM 2353 3198406 - 3198362 - R 76 -13.6 -3.04715 | gap 1, overlap 3198361 3198364 TATCTCGGGGAAAAC GACTGCAGTCAGCCCCTCGGT TGAT ACCGAGGGGCTGCCAGGA-TC AACCGGCGCTGGCGC TERM 2354 3198405 - 3198364 - R 72 -12.9 -3.08032 | overlap 3198362 3198361 TCTCGGGGAAAACGA CTGCAGTCAGCCCCTCGGT TGAT ACCGAGGGGCTGCCAGGAT CAACCGGCGCTGGCG Pmen_2889 3199406 - 3198405 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 2355 3198678 - 3198702 + g 74 -12.1 -3.61398 | overlap 3198670 GAAGAAGTCGCGCAG CTTGTCGCGGG TTT CCTGCGGCAGG TTCTTGCGCCAGACG Pmen_2890 3200284 - 3199460 - | phosphonate ABC transporter, ATPase subunit TERM 2356 3199793 - 3199819 + g 72 -13.6 -3.14132 | opp_overlap 3199777 3199774 CTCGGCCTGTTGGCA CAGCGCGCGGGC GAT GGCCACGCGCTG TTGCTGGCCGCCGGA Pmen_2891 3200670 - 3200996 + | Arc domain-containing protein TERM 2357 3201007 - 3201037 + T 78 -13.5 -3.19157 | opp_overlap 3201015, overlap 3201015 CCTGAGGCGAGCCCA TGAAAAAACCGGC CTTGA GCCGGTTTTTTTA TTCCTGCCATTCCTG TERM 2358 3201015 - 3201029 + T 100 -8.5 -5.84381 | opp_overlap 3201015, overlap 3201007 GAGCCCATGAAAAAA CCGGC CTTGA GCCGG TTTTTTTATTCCTGC TERM 2359 3201029 - 3201015 - T 100 -9.2 -5.15634 | opp_overlap 3201007 3201015 GAGCCCATGAAAAAA CCGGCC TTG AGCCGG TTTTTTTATTCCTGC TERM 2360 3201099 - 3201080 - T 80 -15 -3.05384 | TTGGGCCGTAGCGAA GCGCGGAG CGAA CTCCGCGC CCTGATCAGCCGACG Pmen_2892 3202241 - 3201105 - | sodium ion-translocating decarboxylase, beta subunit TERM 2361 3202118 - 3202131 + g 81 -5.2 -4.72272 | TGGGAACCAGCAGCA GGGG CTCGAA CCCC TTTTTGATGGCCAGG Pmen_2893 3204030 - 3202252 - | pyruvate carboxylase subunit B Pmen_2894 3204351 - 3204055 - | sodium pump decarboxylase, gamma subunit TERM 2362 3204437 - 3204450 + r 77 -3.8 -4.91109 | overlap 3204431 AAGCAAACCCCAGAC TGCC CGGTCA GGCA TTTTTGTAGTGGAGG Pmen_2895 3205488 - 3204511 - | AraC family transcriptional regulator Pmen_2896 3205584 - 3206306 + | short-chain dehydrogenase/reductase SDR Pmen_2897 3206318 - 3206647 + | hypothetical protein TERM 2363 3206702 - 3206692 - g 74 -2.4 -4.75308 | ATGAACATGCAAAAA GCTG TCG CCGC CCTACTGCTCAGCCT Pmen_2898 3206677 - 3207138 + | ketosteroid isomerase-like protein Pmen_2899 3208582 - 3207140 - | magnesium transporter TERM 2364 3208922 - 3208943 + G 70 -8.7 -3.90729 | overlap 3208916 GCGAGGATTGCACTT CGCAGCG CTGCTTGC CGCTGCG TTTCTCCACCTTATT Pmen_2900 3208905 - 3209399 + | hypothetical protein TERM 2365 3209435 - 3209414 - T 100 -15.9 -5.27938 | opp_overlap 3209414 ACGGGCAAAGAAAAA GGGCCTGCA TTGC TGCAGGCCC TTTGGGTATGGCGGA TERM 2366 3209414 - 3209435 + T 95 -15.9 -3.70902 | opp_overlap 3209414 ACGGGCAAAGAAAAA GGGCCTGCA TTGC TGCAGGCCC TTTGGGTATGGCGGA Pmen_2901 3210197 - 3210012 - | carbon storage regulator, CsrA TERM 2367 3210376 - 3210343 - R 100 -12.4 -4.57569 | opp_overlap 3210350, overlap 3210345 CGAGCTGGGCAAAAA GACGAAAGGCGCGG AACCAG CCGCGCCTTTCGGG TAACAGGTATCACTC TERM 2368 3210374 - 3210345 - R 100 -19.4 -3.90316 | opp_overlap 3210350, overlap 3210343 AGCTGGGCAAAAAGA CGAAAGGCGCGG AACCAG CCGCGCCTTTCG GGTAACAGGTATCAC TERM 2369 3210350 - 3210369 + r 82 -12.1 -3.60098 | opp_overlap 3210345 3210343 GGCAAAAAGACGAAA GGCGCGG AACCAG CCGCGCC TTTCGGGTAACAGGT Pmen_2902 3211660 - 3210386 - | aspartate kinase TERM 2370 3210631 - 3210671 + g 71 -9.6 -3.86935 | gap 1, overlap 3210659 CGACCACCTCACGGG CGCCCAGCTCGT-CTGCGG TCTT CTGCAGCACGCCCAGGGCG TTGTTATAGTCGTTG alaS 3214405 - 3211727 - | alanyl-tRNA synthetase Pmen_2904 3215482 - 3214478 - | L-threonine aldolase TERM 2371 3215048 - 3215066 + g 72 -8.8 -4.07568 | GTAGTCGAGCGGCAG CACCTTGC CCT GCATGGTG TTTTCCAGCGCCAGC Pmen_2905 3216654 - 3215641 - | succinylglutamate desuccinylase Pmen_2906 3216950 - 3216672 - | hypothetical protein Pmen_2907 3218322 - 3216976 - | succinylarginine dihydrolase TERM 2372 3217307 - 3217321 + g 72 -11.4 -3.62046 | AGCTGCTCCAGGTAG CGCCAG ACG CTGGCG TTGTTACGGCACTCC Pmen_2908 3219785 - 3218322 - | succinylglutamic semialdehyde dehydrogenase Pmen_2909 3220866 - 3219850 - | arginine succinyltransferase Pmen_2910 3221940 - 3220924 - | arginine succinyltransferase TERM 2373 3221941 - 3221951 + r 70 -4.6 -4.56597 | GCGCATTACCAGCAT GGGG TCA CTCC TTTTTCAAGAAAAGC TERM 2374 3221995 - 3221965 - R 78 -7.5 -4.63218 | gap 1, overlap 3221966 CCTTTTTCAAGAAAA GCTCCGG-TGACCG CGCA CGGGCAGCCGGAGA ACGCCAGGCCAGAGG TERM 2375 3221994 - 3221966 - R 72 -11 -3.3761 | gap 1, overlap 3221965 CTTTTTCAAGAAAAG CTCCGG-TGACCG CGCA CGGGCAGCCGGAG AACGCCAGGCCAGAG TERM 2376 3222017 - 3221997 - R 76 -12.5 -3.31144 | overlap 3221998 CGGGCAGCCGGAGAA CGCCAGGCC AGA GGCCCGGCA CACACAGGAACATCA TERM 2377 3222016 - 3221998 - R 72 -13.8 -2.58544 | overlap 3221997 GGGCAGCCGGAGAAC GCCAGGCC AGA GGCCCGGC ACACACAGGAACATC TERM 2378 3222067 - 3222045 - R 81 -14.1 -3.29144 | opp_overlap 3222044, overlap 3222028 TCATCCGTGGGAGAA GCCCGGCAC TACCT GCGCCGGGC GTTCACTCAGGCGTT argD 3223294 - 3222074 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Pmen_2912 3224701 - 3223721 - | AraC family transcriptional regulator TERM 2379 3224263 - 3224218 - G 73 -12.5 -3.41051 | gap 1 GCAGCGCCAGCAGAA GATCGAGCACCGCCAGGCCGCC GCA GGCAGTCAGGCGAT-CACGATC CCAGTCGAACAGATG Pmen_2913 3225541 - 3224777 - | ABC transporter related Pmen_2914 3226267 - 3225569 - | polar amino acid ABC transporter, inner membrane subunit Pmen_2915 3226953 - 3226264 - | polar amino acid ABC transporter, inner membrane subunit TERM 2380 3227153 - 3227123 - R 100 -10.5 -4.81685 | gap 2, opp_overlap 3227122 3227123, overlap 3227114 ATGAACCAGTAAAAA GTGGCACCG-C-CCG TTG CGGAGTCAGTGCCAC CTTTTCTGCCTACGA Pmen_2916 3227946 - 3227173 - | cationic amino acid ABC transporter, periplasmic binding protein TERM 2381 3228251 - 3228237 - R 80 -10 -4.13728 | CATACATCGCGAAAA GCCCAT TCC ATGGGC GTTAACGCGTCTCGG Pmen_2917 3228926 - 3228402 - | general secretion pathway M protein Pmen_2918 3230068 - 3228929 - | general secretion pathway protein L TERM 2382 3229055 - 3229099 + g 77 -13.8 -3.43071 | gap 2, opp_overlap 3229047 GGCAAAGCCGGGCGC CTGAATCTGCAGCGCCATGTCG GCA CGA-ATGGCGCTGTAG-TCCAG TTGATTGATCTGCAC TERM 2383 3229864 - 3229844 - G 74 -12.5 -3.59979 | opp_overlap 3229845 3229849 CTCTTCCACCGCAAA TGGCAGCGC CTG GCGCAGCCA GCGCGCCTTCTGCGT Pmen_2919 3231039 - 3230065 - | general secretion pathway protein K Pmen_2920 3231755 - 3231036 - | general secretion pathway protein J TERM 2384 3231206 - 3231237 + g 71 -14.4 -2.83271 | opp_overlap 3231205, overlap 3231202 3231211 CATCGCCCGAAGCAT TGGCCGGTGGCCAG TCGG CTTGCCACTGGCCG TCCTTGTCCAGGTAG Pmen_2921 3232135 - 3231752 - | general secretion pathway protein I Pmen_2922 3232713 - 3232132 - | general secretion pathway protein H Pmen_2923 3233110 - 3232685 - | general secretion pathway protein G Pmen_2924 3234331 - 3233114 - | general secretion pathway protein F TERM 2385 3233218 - 3233249 + g 73 -6.5 -4.39133 | gap 1, opp_overlap 3233205 3233217, overlap 3233221 ACGGTTCGAACAATC CGACCAGCAGGGCG ATCTG CGCGCT-CAGGTCG TTTTCCTGGTTCTTC Pmen_2925 3235841 - 3234354 - | general secretory pathway protein E TERM 2386 3234417 - 3234463 + g 75 -15.9 -2.67515 | gap 2, overlap 3234413 TTCGAGCACCTTGCG CCGGCCATCGTCGCGAATGCTCG GGC CGAGCGTGCGCG-CG-TGGCGGG TCATGTCCTGCTCCG Pmen_2926 3236198 - 3236839 + | hypothetical protein TERM 2387 3238730 - 3238700 - g 72 -13.2 -3.16564 | opp_overlap 3238716 CGGCGATGGCAGCAA CGGCCGTCCGAGCA TCC TGCCCAGCCAGCCG GCGCAGTTGTTCGAT Pmen_2927 3236844 - 3238781 + | general secretion pathway protein D TERM 2388 3238868 - 3238901 + T 100 -28.3 -3.57971 | opp_overlap 3238868 TGCTAACCCCTGAAA CGCAACAGGCCCCGC AAAT GCGGGGCCTGTTGCG TTTCAGGCTGGGTAT TERM 2389 3238901 - 3238868 - T 100 -28.3 -3.57561 | opp_overlap 3238868 TGCTAACCCCTGAAA CGCAACAGGCCCCGC AAAT GCGGGGCCTGTTGCG TTTCAGGCTGGGTAT Pmen_2928 3243757 - 3238916 - | glutamate dehydrogenase (NAD) Pmen_2929 3244197 - 3245156 + | ATPase Pmen_2930 3245212 - 3246201 + | hypothetical protein Pmen_2931 3246198 - 3246692 + | hypothetical protein Pmen_2932 3246685 - 3247689 + | von Willebrand factor, type A Pmen_2933 3247686 - 3249452 + | TPR repeat-containing protein Pmen_2934 3249449 - 3251089 + | hypothetical protein TERM 2390 3251455 - 3251408 - T 100 -17.3 -3.57144 | gap 1, opp_overlap 3251417 3251423, overlap 3251409 3251412 3251417 3251423 CTCGTCAGCGCCAAA GCCATAAAACAAAAACCGCGGC ACTCG GCCGCGGTTCTCGTTTTAC-GC AAAGGGCATCAGGCC TERM 2391 3251455 - 3251409 - T 84 -17.5 -2.74144 | opp_overlap 3251417 3251423, overlap 3251408 3251412 3251417 3251423 TCGTCAGCGCCAAAG CCATAAAACAAAAACCGCGGC ACTCG GCCGCGGTTCTCGTTTTACGC AAAGGGCATCAGGCC TERM 2392 3251452 - 3251412 - T 95 -20 -2.64803 | opp_overlap 3251417 3251423, overlap 3251408 3251409 3251417 3251423 TCAGCGCCAAAGCCA TAAAACAAAAACCGCGGC ACTCG GCCGCGGTTCTCGTTTTA CGCAAAGGGCATCAG TERM 2393 3251447 - 3251417 - T 100 -15.5 -4.51196 | opp_overlap 3251417 3251423, overlap 3251412 3251408 3251409 3251423 GCCAAAGCCATAAAA CAAAAACCGCGGC ACTCG GCCGCGGTTCTCG TTTTACGCAAAGGGC TERM 2394 3251417 - 3251447 + T 84 -11.1 -4.07568 | opp_overlap 3251412 3251408 3251409 3251417 3251423, overlap 3251423 GCCAAAGCCATAAAA CAAAAACCGCGGC ACTCG GCCGCGGTTCTCG TTTTACGCAAAGGGC TERM 2395 3251441 - 3251423 - T 100 -13.1 -5.54907 | opp_overlap 3251423 3251417, overlap 3251417 3251412 3251408 3251409 GCCATAAAACAAAAA CCGCGGC ACTCG GCCGCGG TTCTCGTTTTACGCA TERM 2396 3251423 - 3251441 + T 82 -13.1 -3.68359 | opp_overlap 3251417 3251412 3251408 3251409 3251423, overlap 3251417 GCCATAAAACAAAAA CCGCGGC ACTCG GCCGCGG TTCTCGTTTTACGCA Pmen_2935 3253818 - 3251464 - | Patched family protein Pmen_2936 3254928 - 3253837 - | hypothetical protein TERM 2397 3255099 - 3255078 - R 100 -15.9 -5.09225 | AGCTGATGCAAAAAA GGCCGCTAC TACT GTAGCGGCC TTCGCATACGACTAC Pmen_2937 3256492 - 3255122 - | hypothetical protein TERM 2398 3256051 - 3256082 + g 71 -9.4 -3.77553 | gap 1, opp_overlap 3256047, overlap 3256052 CGTTGGTGAAACCGT TGCCGCCATCGGCCA GCT TGGC-GCTGGTGGCG TTCTTGATGGTGTTG TERM 2399 3256515 - 3256541 + r 100 -13.7 -5.39755 | gap 1, opp_overlap 3256512, overlap 3256517 3256518 TCTCCGTGAAGAGTC TGACCGGGCGCC CAAC GGCGCCCGG-CG TTTTTTCTGGTTATG TERM 2400 3256517 - 3256540 + r 93 -15.2 -3.82226 | opp_overlap 3256512, overlap 3256515 3256518 TCCGTGAAGAGTCTG ACCGGGCGCC CAAC GGCGCCCGGC GTTTTTTCTGGTTAT TERM 2401 3256518 - 3256539 + r 86 -18.7 -2.87709 | opp_overlap 3256512, overlap 3256517 3256515 CCGTGAAGAGTCTGA CCGGGCGCC CAAC GGCGCCCGG CGTTTTTTCTGGTTA Pmen_2938 3258558 - 3256561 - | hypothetical protein TERM 2402 3258981 - 3258955 - R 100 -8 -5.4505 | opp_overlap 3258955 TTGGGTAACAAAAAA GTGTTACTAGCC AGA GACCGGTAACAC TTTTTCGAGAGCAGA TERM 2403 3258955 - 3258981 + r 74 -5.8 -4.56597 | opp_overlap 3258955 TTGGGTAACAAAAAA GTGTTACTAGCC AGA GACCGGTAACAC TTTTTCGAGAGCAGA Pmen_2939 3261661 - 3259004 - | aminopeptidase N Pmen_2940 3262516 - 3261713 - | hypothetical protein Pmen_2941 3262812 - 3262549 - | hypothetical protein TERM 2404 3262888 - 3262830 - R 95 -15.4 -3.90291 | opp_overlap 3262847 3262858, overlap 3262831 3262857 3262858 AGGTCTCCAAGTAAA TCGTAGGGCGGATGAAACCCGCCA AAATGCCGCGA TGGCGGGTTTCACCCGCCTCACAG GCTTTAAATCGTTCG TERM 2405 3262887 - 3262831 - R 88 -18.9 -2.93853 | opp_overlap 3262847 3262858, overlap 3262830 3262857 3262858 GGTCTCCAAGTAAAT CGTAGGGCGGATGAAACCCGCCA AAATGCCGCGA TGGCGGGTTTCACCCGCCTCACA GGCTTTAAATCGTTC TERM 2406 3262891 - 3262857 - R 76 -9.3 -4.12942 | opp_overlap 3262847 3262858, overlap 3262831 3262830 3262858 TGAAACCCGCCAAAA TGCC-GCGATGGCGGGT TTC ACCCGCC-TCACAGGCT TTAAATCGTTCGTCG TERM 2407 3262890 - 3262858 - R 72 -12.8 -3.07283 | opp_overlap 3262847 3262858, overlap 3262831 3262830 3262857 GAAACCCGCCAAAAT GCC-GCGATGGCGGGT TTC ACCCGCC-TCACAGGC TTTAAATCGTTCGTC TERM 2408 3262858 - 3262890 + r 76 -10.6 -3.72241 | opp_overlap 3262831 3262830 3262857 3262858, overlap 3262847 GAAACCCGCCAAAAT GCC-GCGATGGCGGGT TTC ACCCGCC-TCACAGGC TTTAAATCGTTCGTC Pmen_2942 3263752 - 3262892 - | rhomboid family protein Pmen_2943 3264723 - 3263749 - | metallophosphoesterase ppnK 3265611 - 3264724 - | inorganic polyphosphate/ATP-NAD kinase TERM 2409 3264807 - 3264823 + g 78 -13.7 -3.62046 | CCAGCGGATGGATCA GGCGCAG CTT CTGCGCC TTCTTGGCCACGTGC TERM 2410 3265940 - 3265923 - g 70 -4 -4.56597 | opp_overlap 3265928 TGGCTGGCGCAAAAA CCCGCG CGCCGC CTCGGG CTGTACTACGAACGC Pmen_2945 3265695 - 3266663 + | hypothetical protein Pmen_2946 3267773 - 3266664 - | cyclic nucleotide-binding protein Pmen_2947 3268740 - 3267796 - | 1-aminocyclopropane-1-carboxylate deaminase-like protein Pmen_2948 3270110 - 3268743 - | hypothetical protein Pmen_2949 3270674 - 3271630 + | TRAP transporter solute receptor TAXI family protein TERM 2411 3271662 - 3271637 - T 75 -8.3 -4.26188 | gap 1, overlap 3271638 CTCAGATAGCCAAAA GTGCCCGCCC TTGCGGC GGGCGG-CAC AATCAGCTCTTGGCT Pmen_2950 3272096 - 3271665 - | hypothetical protein TERM 2412 3272133 - 3272153 + r 93 -15.4 -3.51329 | opp_overlap 3272133 AGGCCAGAAAACAAA CGCCCCGC ACTGA GCGGGGCG TTGTCATTACAGCTC TERM 2413 3272153 - 3272133 - R 100 -15.4 -4.77775 | opp_overlap 3272133 AGGCCAGAAAACAAA CGCCCCGC ACTGA GCGGGGCG TTGTCATTACAGCTC Pmen_2951 3274193 - 3272160 - | 2,4-dienoyl-CoA reductase Pmen_2952 3274396 - 3275421 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2414 3275945 - 3275928 - g 73 -3.5 -4.58395 | gap 1, overlap 3275929 3275930 GTTACTGTGGAAAAA GTGGAAAT CGA ATTTCC-C GCGCCCGCCTACGCC TERM 2415 3276437 - 3276415 - g 73 -14.8 -2.87132 | GCTGGCTCGGACAGA CGCCCGGCGA CTA TCGCCGCGCG CAGCGCAGGGCCAGC Pmen_2953 3275418 - 3276491 + | AraC family transcriptional regulator TERM 2416 3276649 - 3276626 - T 100 -16.8 -5.30616 | opp_overlap 3276626 GCAGGCAAAGAAAAA CCCGCTGATC TTGC GATCAGCGGG TTTCCATATGGCGCA TERM 2417 3276626 - 3276649 + T 100 -16.8 -3.70902 | opp_overlap 3276626 GCAGGCAAAGAAAAA CCCGCTGATC TTGC GATCAGCGGG TTTCCATATGGCGCA TERM 2418 3277112 - 3277098 - T 77 -3.4 -5.00616 | overlap 3277100 CTTTTTCTGAAAAAA GCGCGC CGG GCAGGC AGCTCAATCCATCTC Pmen_2954 3277631 - 3277116 - | MarR family transcriptional regulator Pmen_2955 3277707 - 3279476 + | asparagine synthase (glutamine-hydrolyzing) TERM 2419 3279508 - 3279484 - f 84 -10.7 -4.19735 | overlap 3279486 GTCTGTAAAACCAAA CAGGGGCGG ACTAGCG CCGCCCCTA CAGGATCAATGGTCG TERM 2420 3279506 - 3279486 - f 77 -11.1 -3.695 | overlap 3279484 CTGTAAAACCAAACA GGGGCGG ACTAGCG CCGCCCC TACAGGATCAATGGT Pmen_2956 3279602 - 3281341 + | glutathione synthase Pmen_2957 3281453 - 3282652 + | peptidase M42 family protein TERM 2421 3282693 - 3282710 + F 100 -12.7 -4.87626 | GAGAAAAGATGCCAG GGGGAGC GCCA GCTCCCC TTTTTAATGTTCCGC Pmen_2958 3282837 - 3285581 + | integral membrane sensor hybrid histidine kinase Pmen_2959 3285602 - 3285892 + | hypothetical protein Pmen_2960 3286553 - 3285882 - | 3-methyladenine DNA glycosylase-like protein TERM 2422 3286651 - 3286627 - R 91 -13.5 -3.91488 | overlap 3286630 AAGTCCTGTAAAGAA CAAGGGCGGGG GCC CCCCGACCTCG GGCTGGCCCGTCGCG TERM 2423 3286648 - 3286630 - R 84 -11.6 -4.08557 | overlap 3286627 TCCTGTAAAGAACAA GGGCGGGG GCC CCCCGACC TCGGGCTGGCCCGTC Pmen_2961 3287737 - 3286673 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2424 3287948 - 3287913 - R 100 -22 -5.00616 | opp_overlap 3287918 3287927, overlap 3287918 TTCGGCCGGAAAAAA CAAAACCCCCGGTCGG GTTG CCGACCGGGGGTTTTC TGGAAAACGTCTTTG TERM 2425 3287918 - 3287943 + r 100 -21.9 -4.37092 | opp_overlap 3287918 3287913, overlap 3287927 CCGGAAAAAACAAAA CCCCCGGTCGG GTTG CCGACCGGGGG TTTTCTGGAAAACGT TERM 2426 3287943 - 3287918 - R 100 -21.9 -5.42198 | opp_overlap 3287918 3287927, overlap 3287913 CCGGAAAAAACAAAA CCCCCGGTCGG GTTG CCGACCGGGGG TTTTCTGGAAAACGT Pmen_2962 3289021 - 3288197 - | PP-loop domain-containing protein Pmen_2963 3289122 - 3289715 + | heat shock protein DnaJ domain-containing protein Pmen_2964 3289882 - 3290481 + | hypothetical protein TERM 2427 3290508 - 3290525 + F 100 -14.1 -4.7254 | overlap 3290516 CTCGCTGAACCTCAA GGCCGCC TTCG GGCGGCC TTTTTCATGGCGGCT Pmen_2965 3290621 - 3291283 + | hypothetical protein Pmen_2966 3291345 - 3291839 + | hypothetical protein TERM 2428 3291865 - 3291881 + T 73 -13.7 -2.75074 | overlap 3291861 CCCGACAGGCCGTAG GGTGCGC CGC GCGCACC TGCTGTTACCGTCAA Pmen_2967 3292338 - 3291961 - | hypothetical protein Pmen_2968 3292653 - 3292342 - | hypothetical protein Pmen_2969 3293909 - 3292728 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2429 3293451 - 3293395 - G 77 -15.8 -3.07935 | gap 2 ACTCCATGCAGGGAA CCGCCGGCGATATCCGCCAGCTGCACGC CCA GCG-GCAGCGGGCCGCTGTCGC-GACGG CCGGTGTAGCTGGCG Pmen_2970 3295694 - 3294054 - | AMP-dependent synthetase and ligase Pmen_2971 3296935 - 3295796 - | acyl-CoA dehydrogenase domain-containing protein TERM 2430 3298002 - 3298014 + G 71 -9.1 -3.86015 | opp_overlap 3297983 3297999, overlap 3298001 CGATTCACGACATCG CCGAG CAG CTCGG TTTCTCCGAGCCCTC Pmen_2972 3297005 - 3298099 + | AraC family transcriptional regulator TERM 2431 3298363 - 3298347 - g 73 -9.4 -3.92373 | GAGGCGAGCGAGAAA CTGCCG AGACG CGGCAG AACCAGCGTGGACGG Pmen_2973 3298233 - 3298784 + | hypothetical protein Pmen_2974 3298865 - 3300247 + | methyl-accepting chemotaxis sensory transducer Pmen_2975 3301663 - 3300281 - | integral membrane sensor signal transduction histidine kinase Pmen_2976 3302337 - 3301660 - | two component transcriptional regulator TERM 2432 3302384 - 3302366 - R 93 -17.4 -3.37344 | TTTTCAGTGAACGAA GGCCGGGC GAT GCCCGGCC TGGTGAACGAAGCCT Pmen_2977 3303008 - 3302403 - | hypothetical protein Pmen_2978 3304294 - 3303122 - | major facilitator transporter Pmen_2979 3304514 - 3304681 + | periplasmic nitrate reductase NapE Pmen_2980 3304711 - 3304971 + | NapD family protein TERM 2433 3305033 - 3304998 - g 74 -12.6 -3.57561 | gap 1, overlap 3305003 CGTGAATTCGCCAAA GCCAA-CGCCGCTGC CATCGCC GCAGCGGCGGCCGGC CTGCCGCTTGCCAGC TERM 2434 3305027 - 3305003 - g 75 -14.3 -3.27704 | overlap 3304998 ATTCGCCAAAGCCAA CGCCGCTGC CATCGCC GCAGCGGCG GCCGGCCTGCCGCTT Pmen_2981 3304968 - 3307472 + | nitrate reductase Pmen_2982 3307484 - 3307969 + | periplasmic nitrate reductase subunit NapB Pmen_2983 3307979 - 3308575 + | periplasmic nitrate reductase subunit NapC Pmen_2984 3309185 - 3308727 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2435 3308968 - 3308980 + g 85 -10.5 -4.16681 | overlap 3308973 TTGACGCCCAGCACT CGCGC CGA GCGCG TTTTCAGCTCGTCTT Pmen_2985 3309234 - 3310640 + | type IV pilus assembly PilZ Pmen_2986 3310757 - 3311149 + | hypothetical protein TERM 2436 3311169 - 3311188 + T 100 -12.1 -4.54727 | opp_overlap 3311169, overlap 3311164 GGCAGATGCACAAAA CCCCGCG CTCAGT CGCGGGG TTTTCGTTTCAGCCG TERM 2437 3311188 - 3311169 - T 100 -12.1 -4.45083 | opp_overlap 3311164 3311169 GGCAGATGCACAAAA CCCCGCG CTCAGT CGCGGGG TTTTCGTTTCAGCCG Pmen_2987 3311445 - 3311197 - | hypothetical protein Pmen_2988 3312812 - 3311595 - | tRNA-processing RNAse BN Pmen_2989 3312937 - 3313302 + | arsenate reductase Pmen_2990 3313299 - 3313895 + | flavodoxin/nitric oxide synthase Pmen_2991 3313898 - 3314308 + | membrane protein-like protein Pmen_2992 3314308 - 3315015 + | hypothetical protein Pmen_2993 3315697 - 3314993 - | DNA replication initiation factor Pmen_2994 3316776 - 3315694 - | hypothetical protein Pmen_2995 3317898 - 3316858 - | hypothetical protein TERM 2438 3318353 - 3318323 - g 78 -14.6 -3.28712 | opp_overlap 3318311 CCCGGCCGGCTACAA GCAGCCGGTGCTGG TGT CCGGCACCGACGGC GTCGGCACCAAGCTG TERM 2439 3318692 - 3318678 - g 72 -11.4 -3.54543 | ATCGACGGCTCCAAA GTCGCC ACC GGCGAC GCGCTGATCGCCCTG Pmen_2996 3318156 - 3319214 + | phosphoribosylaminoimidazole synthetase purN 3319214 - 3319858 + | phosphoribosylglycinamide formyltransferase Pmen_2998 3319867 - 3320583 + | hypothetical protein TERM 2440 3320634 - 3320599 - T 85 -15.6 -3.18274 | gap 1, opp_overlap 3320604, overlap 3320604 CGCAGCGCAAGCGAA GAAAAGCCGCGATACCC TTC GGG-ATCGCGGCTTTTT TATGCGCCCCTGATC TERM 2441 3320629 - 3320604 - T 100 -15.5 -4.72029 | gap 1, opp_overlap 3320604, overlap 3320599 CGCAAGCGAAGAAAA GCCGCGATACCC TTC GGG-ATCGCGGC TTTTTTATGCGCCCC TERM 2442 3320604 - 3320629 + T 100 -15.5 -5.24129 | gap 1, opp_overlap 3320604 3320599 CGCAAGCGAAGAAAA GCCGCGATACCC TTC GGG-ATCGCGGC TTTTTTATGCGCCCC Pmen_2999 3321913 - 3320705 - | Rh family protein/ammonium transporter TERM 2443 3321976 - 3321966 - H 70 -4.6 -4.46757 | AACAGAGGCAGAAAA CGCA AAG CGCG CACCACAATGCAGCC Pmen_3000 3322286 - 3322603 + | protein of unknown function DUF883, ElaB Pmen_3001 3322612 - 3322971 + | membrane protein-like protein Pmen_3002 3322968 - 3323267 + | hypothetical protein TERM 2444 3323748 - 3323720 - g 76 -14.6 -3.11634 | gap 1, opp_overlap 3323718 TTCGAGATCACCGAA CTGGGC-GGCGCC AGCC AGCGCCTGCCCAG CGTCGTCTCGCGCTA Pmen_3003 3323366 - 3324529 + | diguanylate phosphodiesterase Pmen_3004 3324603 - 3325934 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 2445 3326059 - 3326071 + G 76 -6.2 -4.53303 | TGCTCGGCCTGTTCA CCGC CCACA GCGG TTTTCTCTGGGCGTC Pmen_3005 3325947 - 3327008 + | hypothetical protein Pmen_3006 3327142 - 3330093 + | metal dependent phosphohydrolase Pmen_3007 3330538 - 3330197 - | hypothetical protein Pmen_3008 3330724 - 3332160 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Pmen_3009 3334409 - 3332232 - | 23S rRNA m(2)G2445 methyltransferase TERM 2446 3334502 - 3334470 - H 71 -6.9 -4.21812 | opp_overlap 3334478, overlap 3334471 3334474 3334478 CTCGACTCAAAATAA GTGACAAAGCGTCGC ACC GCGACCCTTCGTCGG AATAAGCAAGCACTC TERM 2447 3334494 - 3334478 - H 71 -7.9 -4.04764 | opp_overlap 3334478, overlap 3334474 3334471 3334470 AAAATAAGTGACAAA GCGTCGC ACC GCGACCC TTCGTCGGAATAAGC Pmen_3010 3334825 - 3335040 + | ribosome modulation factor TERM 2448 3335100 - 3335117 + T 100 -12.7 -5.27335 | CGGGCGCAAGCCCAA GGGCTCC TTGA GGAGCCC TTTTTATTTGCGCAA Pmen_3011 3336143 - 3335121 - | dihydroorotate dehydrogenase 2 Pmen_3012 3336451 - 3336230 - | hypothetical protein Pmen_3013 3336533 - 3337471 + | hypothetical protein recX 3338003 - 3337551 - | recombination regulator RecX recA 3339067 - 3338024 - | recombinase A Pmen_3016 3339655 - 3339155 - | CinA domain-containing protein TERM 2449 3340331 - 3340301 - R 74 -5.3 -4.56597 | gap 1, overlap 3340306 CTGCCGGCTGAAAAA CGCAAGG-GCTCGC GTCG GCGTGCGCCCTGGG ACTTCGACCGCGACA Pmen_3018 3342467 - 3341166 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 2450 3341534 - 3341550 + g 79 -2.9 -5.08601 | opp_overlap 3341535, overlap 3341535 GGTGCTCATCTGCAA ACAGCTG GAA CAGTTGC TTTTTGTTGGCGTCA TERM 2451 3341878 - 3341889 + g 87 -7.2 -5.06414 | opp_overlap 3341877 3341878 AGCACATCGAGCAAG CGGG CCGG CCCG TTTTTGTTACGCACG Pmen_3019 3343868 - 3344191 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2452 3344193 - 3344249 + T 85 -6.7 -4.81083 | gap 2, opp_overlap 3344205 3344208, overlap 3344205 3344208 3344211 ATCTGGAGCGCTGAG TT-CGCC-TGGAAACACGAAGACCCGC CGAGT GCGGGTCTTCTCGTTTCTGCGGGGCAA TTTTTGATCGTTGCC TERM 2453 3344205 - 3344235 + T 82 -11.1 -3.85817 | opp_overlap 3344205 3344208, overlap 3344193 3344208 3344211 GAGTTCGCCTGGAAA CACGAAGACCCGC CGAGT GCGGGTCTTCTCG TTTCTGCGGGGCAAT TERM 2454 3344235 - 3344205 - T 86 -13.3 -3.53224 | opp_overlap 3344193 3344205 3344208 3344211, overlap 3344208 GAGTTCGCCTGGAAA CACGAAGACCCGC CGAGT GCGGGTCTTCTCG TTTCTGCGGGGCAAT TERM 2455 3344232 - 3344208 - T 78 -15.8 -2.60496 | opp_overlap 3344205 3344193 3344208 3344211, overlap 3344205 TTCGCCTGGAAACAC GAAGACCCGC CGAGT GCGGGTCTTC TCGTTTCTGCGGGGC TERM 2456 3344208 - 3344232 + T 83 -15.8 -3.00946 | opp_overlap 3344208 3344205, overlap 3344205 3344193 3344211 TTCGCCTGGAAACAC GAAGACCCGC CGAGT GCGGGTCTTC TCGTTTCTGCGGGGC TERM 2457 3344211 - 3344229 + T 77 -11.7 -3.64915 | opp_overlap 3344208 3344205, overlap 3344208 3344205 3344193 GCCTGGAAACACGAA GACCCGC CGAGT GCGGGTC TTCTCGTTTCTGCGG TERM 2458 3344306 - 3344326 + T 89 -10.4 -4.69053 | gap 1, opp_overlap 3344306 3344307, overlap 3344306 3344307 TCGCAGGCAAAAAAA G-GGGCGGC TTGC GCCGCCCAC TTTTATTCCCTAGTC TERM 2459 3344325 - 3344306 - T 100 -10.6 -5.47218 | opp_overlap 3344306 3344306 3344307, overlap 3344307 TCGCAGGCAAAAAAA GGGGCGGC TTGC GCCGCCCA CTTTTATTCCCTAGT TERM 2460 3344324 - 3344307 - T 91 -14.1 -3.87608 | opp_overlap 3344306 3344306 3344307, overlap 3344306 CGCAGGCAAAAAAAG GGGCGGC TTGC GCCGCCC ACTTTTATTCCCTAG TERM 2461 3344307 - 3344324 + T 72 -14.1 -2.63702 | opp_overlap 3344307 3344306, overlap 3344306 3344306 CGCAGGCAAAAAAAG GGGCGGC TTGC GCCGCCC ACTTTTATTCCCTAG TERM 2462 3344654 - 3344639 - T 100 -11.8 -5.24129 | opp_overlap 3344639 TCCGCGCATAAAAAA CCCGGC CGAA GCCGGG TTGGTGATCAGGACA Pmen_3020 3345681 - 3344674 - | RNA polymerase sigma factor RpoS TERM 2463 3345010 - 3345051 + g 77 -7.1 -4.57341 | opp_overlap 3345009 GTCCACCGAGGACAC CCGCTCGTTGAGGCCGAGC ATGC GCTTGACCTCGCCCACCGG TTTTTCCAGCAGGTT TERM 2464 3345257 - 3345242 - G 79 -6.8 -4.61231 | GCATAGGTCGAAAAA CGGAAC CCCC GCTCCG GATCGAATTTTTCCA Pmen_3021 3346664 - 3345783 - | peptidase M23B Pmen_3022 3347651 - 3346713 - | hypothetical protein TERM 2465 3347156 - 3347137 - G 79 -11.4 -3.80841 | AGCAGCAGGATGAAA CTGCCGGA AACC CCCGGCAG GATCATGGCGCAGAT pcm 3348352 - 3347678 - | protein-L-isoaspartate O-methyltransferase TERM 2466 3347760 - 3347742 - G 77 -3 -4.84761 | overlap 3347730 3347743 ACATGGCGAGAAAAA CCATGCTC TTC GCGCACGA TCAGCAGCAGTTGCT surE 3349101 - 3348352 - | stationary phase survival protein SurE truD 3350147 - 3349089 - | tRNA pseudouridine synthase D ispF 3350617 - 3350144 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 2467 3350227 - 3350261 + g 70 -13.6 -3.03124 | TCTCGGTGGTCGTAG CCTTGACGTTGACCTG ATC CAGCTCGACGCCAAGG TCTTCGGCAATGCGC TERM 2468 3350653 - 3350621 - R 86 -12.8 -3.9534 | opp_overlap 3350624 3350627, overlap 3350627 ACCGATACGCATAAA GAACAACGCCCTGA AAAAG TCAGGGCGTGATTC TACATGCACAGACTG TERM 2469 3350647 - 3350627 - R 95 -12.6 -4.16305 | opp_overlap 3350627 3350624, overlap 3350621 ACGCATAAAGAACAA CGCCCTGA AAAAG TCAGGGCG TGATTCTACATGCAC TERM 2470 3350627 - 3350647 + r 70 -12.6 -2.8474 | opp_overlap 3350621 3350627, overlap 3350624 ACGCATAAAGAACAA CGCCCTGA AAAAG TCAGGGCG TGATTCTACATGCAC Pmen_3027 3351586 - 3350744 - | carboxylesterase TERM 2471 3351692 - 3351668 - R 95 -13.5 -4.00756 | overlap 3351669 CACCCTACGAAAGAA TCCGCACGACC ATC GGCCGTGCGGC GCGTCATCAGAAATG TERM 2472 3351691 - 3351669 - R 87 -17 -2.99972 | overlap 3351668 ACCCTACGAAAGAAT CCGCACGACC ATC GGCCGTGCGG CGCGTCATCAGAAAT Pmen_3028 3352811 - 3351699 - | alcohol dehydrogenase Pmen_3029 3352990 - 3353904 + | LysR family transcriptional regulator Pmen_3030 3353908 - 3354309 + | hypothetical protein ispD 3355019 - 3354312 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 2473 3355034 - 3355048 + r 73 -10 -3.57144 | opp_overlap 3355034 3355036 TTCGGTCAGCAGATA GAGGGT TTC ACCCTC TTTGAGCATGCCCAG Pmen_3032 3355342 - 3355016 - | cell division protein FtsB TERM 2474 3355436 - 3355453 + r 100 -12.7 -4.36914 | opp_overlap 3355436 AGCGTCCACGAAAAA GGGCGAC TTGC GTCGCCC TTTTCTACCACGCAG TERM 2475 3355453 - 3355436 - R 100 -12.7 -4.7254 | opp_overlap 3355436 AGCGTCCACGAAAAA GGGCGAC TTGC GTCGCCC TTTTCTACCACGCAG eno 3356761 - 3355472 - | phosphopyruvate hydratase TERM 2476 3356846 - 3356871 + r 81 -6.1 -4.82901 | GGGCAGATCGGCGGC TCACTCTGACT CACG GGTCAGGGGGA TTTTTCTCGGGCGGC Pmen_3034 3357754 - 3356909 - | 2-dehydro-3-deoxyphosphooctonate aldolase Pmen_3035 3359389 - 3357758 - | CTP synthetase Pmen_3036 3360862 - 3359540 - | tRNA(Ile)-lysidine synthetase TERM 2477 3360898 - 3360883 - R 84 -11.8 -4.1023 | opp_overlap 3360880 AAGCTTAAACAACAA CGGGCC CGAA GGCCCG TGGTGGTGTGCGATA Pmen_3037 3361958 - 3361002 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha dnaE 3365609 - 3362079 - | DNA polymerase III subunit alpha TERM 2478 3363861 - 3363875 + g 73 -9.2 -3.92373 | GACCAAGTCCTCGTC CGCGGC GCC GTCGCG TTTCTGGATGCGGTG rnhB 3366307 - 3365681 - | ribonuclease HII lpxB 3367440 - 3366307 - | lipid-A-disaccharide synthase TERM 2479 3366795 - 3366771 - G 73 -13.5 -3.21695 | overlap 3366766 GCAGCAGGAAGCGAA CGCCTGGACGC AAG GCGCGCAGGCG AATGGCCGCATCGAG Pmen_3041 3368222 - 3367446 - | UDP-N-acetylglucosamine acyltransferase TERM 2480 3368184 - 3368144 - G 75 -13.9 -3.28924 | CATCGGGCCCGACAA TGCTCCACGGGCCGACGAC GAC GTCGTCGGCCAGTCTGGCA CTGGGGTCGATGATG fabZ 3368659 - 3368219 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 2481 3368708 - 3368688 - R 100 -9.7 -5.27476 | TGTAAGAAAAGAAAA GAGCACTAC AAC GTCGTGCTC AGGCATCAGATGAGA lpxD 3369762 - 3368707 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 2482 3368742 - 3368754 + g 70 -2.6 -4.59773 | overlap 3368725 TCGCCGTCTGGGTCA CGGC GGCCA GCTG TTTTTCCAGCTCACG TERM 2483 3369651 - 3369683 + g 100 -24.9 -3.37236 | opp_overlap 3369640 GGAAGCTCAACTGTT CGGGCCTGGCCTCCT GCA AGGTGGCCAGGCCCG TTATGACCTTAGCTT Pmen_3044 3370268 - 3369765 - | outer membrane chaperone Skp (OmpH) Pmen_3045 3372673 - 3370313 - | surface antigen (D15) TERM 2484 3372725 - 3372707 - R 88 -6.6 -4.92783 | opp_overlap 3372707 3372708, overlap 3372708 AACTGACGATAAAAA CTGCCGCC CAA GGCGACAC TTCTTGTGAATCTCG TERM 2485 3372724 - 3372708 - R 70 -10.1 -3.54585 | opp_overlap 3372707 3372708, overlap 3372707 ACTGACGATAAAAAC TGCCGCC CAA GGCGACA CTTCTTGTGAATCTC Pmen_3046 3374113 - 3372761 - | putative membrane-associated zinc metalloprotease Pmen_3047 3375315 - 3374131 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Pmen_3048 3376127 - 3375312 - | phosphatidate cytidylyltransferase TERM 2486 3376084 - 3376072 - G 100 -6.9 -5.67063 | opp_overlap 3376076, overlap 3376073 3376074 TCGAGCAGAAAAAAA CCGCC CAG GGCGA TGGGCAACAGCACCA TERM 2487 3376083 - 3376073 - G 70 -8.2 -3.99153 | opp_overlap 3376076, overlap 3376072 3376074 CGAGCAGAAAAAAAC CGCC CAG GGCG ATGGGCAACAGCACC Pmen_3049 3376873 - 3376127 - | undecaprenyl pyrophosphate synthetase frr 3377449 - 3376892 - | ribosome recycling factor pyrH 3378189 - 3377446 - | uridylate kinase TERM 2488 3378222 - 3378242 + r 72 -11.9 -3.30159 | GCGATATGAATGCTG TTGCGATGC CAG GCATCGCGA TTATCCGGCACTTCG TERM 2489 3378346 - 3378319 - R 100 -17 -3.55444 | CCCTTATTCGGCAAA GAGGCTGCACGC GCAA GCGGGCAGCCTC TCGGGGACAACTGGC tsf 3379236 - 3378373 - | elongation factor Ts TERM 2490 3378642 - 3378652 + g 72 -5.4 -4.4078 | CGGCGTTCAGCTGCA GGAA GAT TTCC TTTTCCTTGGCAACC TERM 2491 3379324 - 3379310 - R 100 -12.8 -4.59773 | opp_overlap 3379310 TGTGAGTGGCAAAAA GGGGGC CTA GCCCCC TTCTTGCACAGCGCA TERM 2492 3379310 - 3379324 + r 82 -12.8 -3.61398 | opp_overlap 3379310 TGTGAGTGGCAAAAA GGGGGC CTA GCCCCC TTCTTGCACAGCGCA rpsB 3380109 - 3379366 - | 30S ribosomal protein S2 Pmen_3054 3380426 - 3381208 + | methionine aminopeptidase TERM 2493 3381217 - 3381275 + F 79 -15.6 -2.71712 | gap 3, opp_overlap 3381245, overlap 3381213 3381251 GGCCTGACCGCGATC ---CGTAGGGTGCGCCGTGCGCACCAT TGAAGCTT GTGGTGCGCATGGCGCACCCTACGAAC CTTTAAGAGGAAGGC TERM 2494 3382011 - 3382028 + G 82 -12.7 -3.96148 | ACCCTCAACCTGCAG GCCCTGG TCGG CCAGGGC TTTCTGCTGGAAAGC glnD 3381297 - 3383996 + | PII uridylyl-transferase TERM 2495 3384524 - 3384541 + G 70 -9.9 -3.74383 | opp_overlap 3384523 CGGTGCCGAGCGAAG TCTGGCA GCGC TGCCAGA TTCTCTTCCTGTGCT Pmen_3056 3384034 - 3385230 + | hypothetical protein Pmen_3057 3385964 - 3385248 - | hypothetical protein TERM 2496 3386325 - 3386298 - g 71 -9.2 -3.86897 | gap 1, opp_overlap 3386298 GCGAGCCTGCAGAAA TGGTGCTCCGAGC ACG GCTGGGAG-ACCA TTCTCAACCGCGCCG Pmen_3058 3386160 - 3386510 + | arsenate reductase and related Pmen_3059 3386547 - 3387581 + | tetrahydrodipicolinate N-succinyltransferase-like protein TERM 2497 3388685 - 3388740 + G 77 -10.4 -3.91897 | gap 3 GAGCTGCTGGCCGGC CTGGC-GGCGCGCGACGGC-GTGCGCC TGCTC GGCGCGCCGCAGCTG-GCGCTGGCCAG TTTCTGCGTCGACGG Pmen_3060 3387731 - 3388954 + | aminotransferase, class V Pmen_3061 3388951 - 3389379 + | Fe-S metabolism associated SufE Pmen_3062 3389895 - 3389425 - | hypothetical protein Pmen_3063 3390738 - 3389944 - | amino acid ABC transporter periplasmic protein Pmen_3064 3391691 - 3390882 - | UBA/THIF-type NAD/FAD binding protein Pmen_3065 3391816 - 3392967 + | iron-containing alcohol dehydrogenase Pmen_3066 3393035 - 3394177 + | succinyl-diaminopimelate desuccinylase TERM 2498 3394344 - 3394305 - g 84 -14.2 -3.9644 | gap 1, overlap 3394307 GGTGCAACACAAGAA CAGCCGCGACCCCGGCGAC AAC GCCGCCATGGTCGAGGC-G CGCCGACGCTTTCTC TERM 2499 3394343 - 3394307 - g 90 -17.9 -3.56921 | overlap 3394305 TGCAACACAAGAACA GCCGCGACCCCGGCGAC AAC GCCGCCATGGTCGAGGC GCGCCGACGCTTTCT Pmen_3067 3394174 - 3394986 + | rRNA (guanine-N(1)-)-methyltransferase Pmen_3068 3394992 - 3395363 + | hypothetical protein TERM 2500 3395562 - 3395532 - T 100 -19.8 -3.87373 | opp_overlap 3395538, overlap 3395535 TACAGCGTGCAGAAA CGACAAGGCCCGTC ATC GACGGGCCTTGTGG CATTACGAGCTTGGC TERM 2501 3395559 - 3395535 - T 95 -20.1 -3.01125 | opp_overlap 3395538, overlap 3395532 AGCGTGCAGAAACGA CAAGGCCCGTC ATC GACGGGCCTTG TGGCATTACGAGCTT TERM 2502 3395538 - 3395556 + T 89 -16 -3.36492 | opp_overlap 3395535 3395532 GTGCAGAAACGACAA GGCCCGTC ATC GACGGGCC TTGTGGCATTACGAG Pmen_3069 3395789 - 3395580 - | cold-shock DNA-binding protein family protein Pmen_3070 3397149 - 3396085 - | hypothetical protein TERM 2503 3397162 - 3397106 - G 85 -18.1 -2.58272 | overlap 3397102 3397103 GATAGGATGAAGCCA CGCAGGG-GCGCCGTGCGCACCGAAGC TTCCT GAGT-GGTGCGCACGGCACACCCTACG GGCCTCTGGAAAACC TERM 2504 3397231 - 3397185 - R 80 -14.4 -3.10531 | overlap 3397183 GGAAAACCAGACATA GGGGGAGGTACTTCAGCGGCAA CGG TCGCGACTGAAGCCCCTCCCAC AGGTGAACATCAAGC TERM 2505 3397268 - 3397245 - R 72 -11 -3.37513 | gap 1, overlap 3397246 ACAGGTGAACATCAA GC-GTGACGGC GGC GCCGCCACAGC CACAGCGCCAACACG Pmen_3071 3399073 - 3397241 - | ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein Pmen_3072 3399814 - 3399083 - | hypothetical protein TERM 2506 3399682 - 3399659 - G 70 -10.2 -3.68222 | GTGGAAGTTGAAGAA GGCGGACAGA TTGG CCTGGCCGCC CTCGAAGAAGCCGCC Pmen_3073 3400734 - 3399811 - | ABC transporter related Pmen_3074 3400834 - 3401154 + | hypothetical protein Pmen_3075 3401821 - 3401123 - | integron integrase Pmen_3076 3402354 - 3402833 + | GCN5-related N-acetyltransferase Pmen_3077 3403369 - 3403683 + | hypothetical protein Pmen_3078 3403761 - 3404114 + | hypothetical protein TERM 2507 3405075 - 3405064 - g 87 -7.2 -5.06414 | opp_overlap 3405064 3405063 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 2508 3405419 - 3405403 - g 79 -2.9 -5.08601 | opp_overlap 3405404, overlap 3405404 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_3079 3404486 - 3405787 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Pmen_3080 3405788 - 3406264 + | hypothetical protein TERM 2509 3406566 - 3406540 - g 79 -8.7 -4.4078 | opp_overlap 3406545 3406547 CTTTCCGAAGCAAAA CACAGAAGCCG TGGAG CGGCTCTTGTG TTCGGCATCTCCAGA Pmen_3081 3406355 - 3406804 + | hypothetical protein TERM 2510 3406837 - 3406869 + F 85 -15.7 -3.22409 | opp_overlap 3406845, overlap 3406831 GCTCACTTCGTTCGC TGGACAGACAAAAGC TAC GCTTTTGTCTGCCCG TTAGCTTAATCGTTA TERM 2511 3407080 - 3407093 + F 71 -5.3 -4.41548 | opp_overlap 3407080 TGGTCACTTGAAGAA GCATA CGAA TATGC TTTTATAGACTATGG TERM 2512 3407193 - 3407165 - f 70 -4 -4.64992 | gap 2, overlap 3407168 TTGAAAAAATAGAAA GCAGCATTGGCTAG CAG CTAAC-AATGC-GC TTAAATCGTTCGCTT Pmen_3082 3407321 - 3407632 + | hypothetical protein TERM 2513 3407666 - 3407685 + F 70 -10.6 -3.53224 | CGCTTCGCTCACTCG GGGCCGGC CAAA GCCCGCCC TTTAGCCAAACGCTA Pmen_3083 3408318 - 3408797 + | hypothetical protein Pmen_3084 3410390 - 3408828 - | transposase IS66 TERM 2514 3409321 - 3409333 + g 72 -6.9 -4.20354 | overlap 3409322 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_3085 3410769 - 3410410 - | IS66 Orf2 family protein Pmen_3086 3410838 - 3411218 + | hypothetical protein Pmen_3087 3411278 - 3411805 + | gentamicin 3'-N-acetyltransferase Pmen_3088 3411886 - 3412278 + | hypothetical protein Pmen_3089 3412432 - 3413274 + | hypothetical protein Pmen_3090 3413433 - 3413816 + | hypothetical protein TERM 2515 3413908 - 3413920 + F 93 -7.7 -5.00616 | opp_overlap 3413908 CAGCGCGGTGAAGAA CTTCC CCC GGAAG TTTTTTGCCCGCCAC Pmen_3091 3414000 - 3416483 + | glycerol-3-phosphate acyltransferase TERM 2516 3417167 - 3417128 - g 72 -14.9 -2.78384 | opp_overlap 3417126 3417136 TTGGCTTTCAGGACA GCCTGCACCGCATGCCG GTGGCG CGGCATGCCGGGCTGGC CTCGTCCTTCGGCCT TERM 2517 3417136 - 3417185 + G 72 -11.9 -3.53811 | gap 1, opp_overlap 3417128, overlap 3417126 CAGGACAGCCTGCAC CGCATGCCGGTGG-CGCGGCATGC CGG GCTGGCCTCGTCCTTCGGCCTGCG TTTCCAGGGGCTGGG Pmen_3092 3416692 - 3417405 + | hypothetical protein TERM 2518 3417466 - 3417454 - T 71 -5.5 -4.38927 | overlap 3417457 CTCCTATAGAACAAA CCACG CCC CGTAG GAGCCGCTTGCGGGC TERM 2519 3417521 - 3417547 + T 93 -15 -3.79113 | opp_overlap 3417521 GGGCCCAAGAAAAAA CCCGCCGAGCGC ATC GCGCAGGGCGGG TTCTTATACAGCGGT TERM 2520 3417547 - 3417521 - T 100 -15 -5.4505 | opp_overlap 3417521 GGGCCCAAGAAAAAA CCCGCCGAGCGC ATC GCGCAGGGCGGG TTCTTATACAGCGGT Pmen_3093 3419255 - 3417570 - | malate:quinone oxidoreductase TERM 2521 3418433 - 3418401 - G 73 -14.1 -3.14211 | opp_overlap 3418409, overlap 3418407 ACCGGCGCCGATGAA GACGAAGCGCGCATC GAT GCTGCGCTCTTCGCC GCCCTTGGCCAGGTC TERM 2522 3419570 - 3419609 + H 89 -4.9 -5.24129 | gap 1, overlap 3419576 3419581 AGCCACACGCCGGCA GCGGCGCCGA-ACGACTG CCGAT CGGTCGTATCTGATCCGC TTTTTTATCGAAAAC Pmen_3094 3419698 - 3421110 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2523 3421185 - 3421159 - f 74 -12.2 -3.16564 | GGTGGACGCGATCAA TCCCCTCTCCCC TCC GGGGAGAGGGCT AGGGAGAGGGGAGCA TERM 2524 3422529 - 3422572 + G 71 -2.9 -4.614 | gap 1, overlap 3422532 3422558 GCCTCGGCCGCCCGG CATTTTCCCGCCAGCACGCG GGTGA CGCG-GCCGGCGGGCGGCTA TTTTCTCTGGTTCGA Pmen_3095 3421308 - 3422783 + | GntR family transcriptional regulator Pmen_3096 3423009 - 3424181 + | hypothetical protein Pmen_3097 3424787 - 3424185 - | SH3 type 3 domain-containing protein Pmen_3098 3426421 - 3425060 - | diguanylate phosphodiesterase TERM 2525 3425173 - 3425162 - G 77 -7.2 -4.56597 | opp_overlap 3425161, overlap 3425164 GTTGTCGGCCAAAAA GCGC CGCT GCGC CTCGGTTTCCACCCC Pmen_3099 3427387 - 3426458 - | LysR family transcriptional regulator TERM 2526 3426716 - 3426670 - G 72 -12.9 -3.10344 | gap 1, overlap 3426668 CGGCCACCGAATACA GCGGCTGCAGGCTGATGCCGGC ACCG GCCAGCGCC-GCCTCCAGCAGC ACCATCGACTCGTTG Pmen_3100 3427489 - 3428352 + | beta-lactamase domain-containing protein TERM 2527 3428507 - 3428548 + F 86 -13.8 -3.53224 | gap 1, opp_overlap 3428507 3428508 3428513, overlap 3428508 3428510 3428513 CAGCCTCCGCCCAAA CGACAACGCCCGGCAGATC GCGGA GA-CTGGCGGGCGTTGTCA TTTGGGGCGCCGGTA TERM 2528 3428548 - 3428507 - f 93 -16 -3.53224 | gap 1, opp_overlap 3428507 3428508 3428510 3428513, overlap 3428508 3428513 CAGCCTCCGCCCAAA CGACAACGCCCGGCAGATC GCGGA GA-CTGGCGGGCGTTGTCA TTTGGGGCGCCGGTA TERM 2529 3428508 - 3428547 + F 84 -17.3 -2.71791 | gap 1, opp_overlap 3428507 3428508 3428513, overlap 3428507 3428510 3428513 AGCCTCCGCCCAAAC GACAACGCCCGGCAGATC GCGGA GA-CTGGCGGGCGTTGTC ATTTGGGGCGCCGGT TERM 2530 3428547 - 3428508 - f 84 -17.3 -2.71791 | gap 1, opp_overlap 3428508 3428507 3428510 3428513, overlap 3428507 3428513 AGCCTCCGCCCAAAC GACAACGCCCGGCAGATC GCGGA GA-CTGGCGGGCGTTGTC ATTTGGGGCGCCGGT TERM 2531 3428510 - 3428545 + F 75 -14.1 -2.90496 | gap 1, opp_overlap 3428508 3428507 3428513, overlap 3428508 3428507 3428513 CCTCCGCCCAAACGA CAACGCCCGGCAGATC GCGGA GA-CTGGCGGGCGTTG TCATTTGGGGCGCCG TERM 2532 3428542 - 3428513 - f 73 -10 -3.60151 | gap 1, opp_overlap 3428513 3428510 3428508 3428507, overlap 3428508 3428507 CCGCCCAAACGACAA CGCCCGGCAGATC GCGGA GA-CTGGCGGGCG TTGTCATTTGGGGCG TERM 2533 3428513 - 3428542 + F 73 -10 -3.60151 | gap 1, opp_overlap 3428508 3428507 3428513, overlap 3428510 3428508 3428507 CCGCCCAAACGACAA CGCCCGGCAGATC GCGGA GA-CTGGCGGGCG TTGTCATTTGGGGCG TERM 2534 3428687 - 3428663 - f 84 -5.8 -4.99035 | opp_overlap 3428663 TCAGCTATACAAAAA CTGTACATAA ACAAA CCATGTACAG CTTTAGGTAAATCGA Pmen_3101 3428704 - 3430482 + | acyl-CoA dehydrogenase domain-containing protein Pmen_3102 3430619 - 3431164 + | hypothetical protein Pmen_3103 3431173 - 3431706 + | hypothetical protein TERM 2535 3431747 - 3431786 + G 71 -12.3 -3.30441 | gap 3, opp_overlap 3431712 GGGCAGCGGCTACCG GGCGCTGGT-GATCGGCGCC AGC GGCGCC-ATCGGCCAG-GCC TTCTGCCAGCTGCTG TERM 2536 3432174 - 3432134 - g 75 -14 -3.30441 | gap 1 CAGCATCGGCGACAA CCGCCTCGGCGGC-TGGTA CGCC TACCGCGCCTCCAAGGCGG CGCTGAACATGCTGA Pmen_3104 3431703 - 3432413 + | short-chain dehydrogenase/reductase SDR Pmen_3105 3432834 - 3432421 - | hypothetical protein Pmen_3106 3432938 - 3433615 + | hypothetical protein TERM 2537 3433620 - 3433656 + T 93 -15.2 -3.75153 | gap 2, opp_overlap 3433619 3433620, overlap 3433621 3433623 GCGCGCTCTGAGAAC G-GC-CGCCCCGTTGGCT CGC GGCCAGCGGGGCGTGCTC TTTGCGTTCAGGGCC TERM 2538 3433621 - 3433654 + T 100 -18.9 -3.46068 | gap 1, opp_overlap 3433620 3433619, overlap 3433620 3433623 CGCGCTCTGAGAACG GC-CGCCCCGTTGGCT CGC GGCCAGCGGGGCGTGC TCTTTGCGTTCAGGG TERM 2539 3433623 - 3433651 + T 95 -20.3 -2.87581 | opp_overlap 3433620 3433619, overlap 3433621 3433620 CGCTCTGAGAACGGC CGCCCCGTTGGCT CGC GGCCAGCGGGGCG TGCTCTTTGCGTTCA Pmen_3107 3434443 - 3433664 - | diguanylate phosphodiesterase TERM 2540 3434729 - 3434691 - R 100 -22.5 -3.57561 | opp_overlap 3434696 3434697 3434697, overlap 3434697 TTCTAATCGCGCAAA CGAAAACCCCGCCGGGC TTTTG GCCGGGCGGGGCTTTCG CGGTGCCGTTGCCGA TERM 2541 3434696 - 3434724 + r 88 -13.7 -3.5764 | opp_overlap 3434691 3434697, overlap 3434697 3434697 ATCGCGCAAACGAAA ACCCCGCCGGGCT TTT GGCCGGGCGGGGC TTTCGCGGTGCCGTT TERM 2542 3434697 - 3434723 + r 84 -17.2 -2.74263 | opp_overlap 3434697 3434691, overlap 3434697 3434696 TCGCGCAAACGAAAA CCCCGCCGGGCT TTT GGCCGGGCGGGG CTTTCGCGGTGCCGT TERM 2543 3434723 - 3434697 - R 100 -16.5 -4.54727 | opp_overlap 3434696 3434697 3434697, overlap 3434691 TCGCGCAAACGAAAA CCCCGCCGGGC TTTTG GCCGGGCGGGG CTTTCGCGGTGCCGT acsA 3436706 - 3434745 - | acetyl-CoA synthetase TERM 2544 3436715 - 3436726 + H 84 -5.8 -4.9041 | opp_overlap 3436714 CACTCATGGATATAC CTCG ATGG CGAG TTGTTTTTTTATGCT TERM 2545 3436780 - 3436807 + H 87 -17.2 -3.03771 | overlap 3436772 3436783 CGTGGGGCCATTCGA CCATGGTCTTAC CGTT GTAAGACCATGG TCTTGAGGGCTCTGA TERM 2546 3436903 - 3436884 - H 100 -15 -5.75342 | overlap 3436895 CGCGGGCAAAAAAAA GGGCGACC AATT GGTCGCCC GCCCATTCAAGGCAT Pmen_3110 3437083 - 3437643 + | CMP/dCMP deaminase, zinc-binding Pmen_3111 3439354 - 3437801 - | transcriptional regulator, TyrR phhA 3439608 - 3440393 + | phenylalanine 4-monooxygenase phhB 3440515 - 3440868 + | pterin-4-alpha-carbinolamine dehydratase Pmen_3114 3440865 - 3442061 + | aromatic amino acid aminotransferase TERM 2547 3442442 - 3442496 + G 79 -3.4 -5.06414 | gap 1, opp_overlap 3442481, overlap 3442481 CAACATCGTGCGCAA GGCGCTGATCGCCGGCGAGATCG ACCTCTACCC CGAATACACCGGCAA-CGGCGCC TTTTTCTTCGACCAG Pmen_3115 3442233 - 3443147 + | substrate-binding region of ABC-type glycine betaine transport system Pmen_3116 3443157 - 3444317 + | binding-protein-dependent transport systems inner membrane component TERM 2548 3444371 - 3444397 + G 70 -5.9 -4.21908 | gap 2, overlap 3444384 ACGGCGGTGGATGAG CT-GTCGCT-GCG CAT CGCCAGCGGCGAG TTTTGCGTACTGGTC Pmen_3117 3444314 - 3445252 + | ABC transporter related Pmen_3118 3445252 - 3445980 + | binding-protein-dependent transport systems inner membrane component Pmen_3119 3446175 - 3447437 + | major facilitator transporter Pmen_3120 3447528 - 3449786 + | glucosylglycerol-phosphate synthase Pmen_3121 3450839 - 3450513 - | hypothetical protein Pmen_3122 3451395 - 3450976 - | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_3123 3451834 - 3451409 - | DGPFAETKE family protein Pmen_3124 3452706 - 3451963 - | alpha/beta hydrolase fold Pmen_3125 3454302 - 3452905 - | hypothetical protein Pmen_3126 3455210 - 3454299 - | alpha/beta hydrolase fold Pmen_3127 3456455 - 3455340 - | maltose/maltodextrin transporter ATP-binding protein TERM 2549 3456536 - 3456507 - R 74 -12.7 -3.16921 | ATGAACCTTGAGGAA GCCGCGGGGCCGG CGTA CCGGCCCTGCAGG AATCGCCCTAGCCCA Pmen_3128 3458172 - 3456544 - | alpha amylase, catalytic region TERM 2550 3458240 - 3458250 + r 71 -8.2 -4.08216 | AAGGCGTCACATCCT CCCC GCT GGGG TTTTCACCGGCGTAG TERM 2551 3458392 - 3458449 + r 72 -11.1 -3.34043 | gap 1, opp_overlap 3458394 3458396 CAACAACGCATACGA CAGATGCCCCGACCACGCATCGGTGCGC ACG GCGCACCC-TACGGGGCCGGGATATCGG TTCTCCCCTACTCGC TERM 2552 3458447 - 3458394 - R 85 -16.7 -2.8779 | gap 1, opp_overlap 3458392, overlap 3458396 ACAACGCATACGACA GATGCCCCGACCACGCATCGGTGCGC ACG GCGCACCC-TACGGGGCCGGGATATC GGTTCTCCCCTACTC TERM 2553 3458445 - 3458396 - R 76 -13.5 -2.98491 | gap 1, opp_overlap 3458392, overlap 3458394 AACGCATACGACAGA TGCCCCGACCACGCATCGGTGCGC ACG GCGCACCC-TACGGGGCCGGGATA TCGGTTCTCCCCTAC Pmen_3129 3461201 - 3458457 - | transcriptional regulator MalT TERM 2554 3459612 - 3459627 + g 72 -5.4 -4.32034 | gap 1, overlap 3459612 3459613 CGAGGCGTTGATCTG C-TGCGC GCG GCGCACG TTTTCCTCGTGCTGA malG 3462237 - 3461347 - | maltose transporter permease malF 3463810 - 3462248 - | maltose transporter membrane protein TERM 2555 3463830 - 3463869 + r 76 -9.8 -3.75629 | gap 1, overlap 3463831 GTTATAGCCTCGGAG CGAGGCCGCTG-CCGACGC CAG GCGCCGGTCAGCGGCCGGA TTTCACTTGGCGATG TERM 2556 3463831 - 3463868 + r 75 -13.3 -2.85056 | gap 1, overlap 3463830 TTATAGCCTCGGAGC GAGGCCGCTG-CCGACGC CAG GCGCCGGTCAGCGGCCGG ATTTCACTTGGCGAT malE 3465059 - 3463872 - | maltose ABC transporter periplasmic protein TERM 2557 3465247 - 3465234 - H 85 -2.3 -5.41143 | opp_overlap 3465243 GATTCCGGAAAAAAA GCATG CGCC CCTGC CCCTTCTGCGCCTGT TERM 2558 3465693 - 3465731 + G 72 -14.4 -3.01712 | GCAGCGCCTGCCGCA CCTGGCAGGGCGAGGCGC TGA GCGTCGCGGTCGGCCAGG TATTCGCCGACGGCG malS 3465317 - 3467380 + | periplasmic alpha-amylase precursor Pmen_3134 3467577 - 3468656 + | hypothetical protein Pmen_3135 3469295 - 3468765 - | hypothetical protein TERM 2559 3469271 - 3469255 - G 70 -6.5 -4.1711 | overlap 3469257 3469260 ACCAGGGTGAAGAAA TAGCAGG CGC CCTGCTC CCGGGCGCGGCGGTA Pmen_3136 3471112 - 3469445 - | glucan 1,4-alpha-maltotetraohydrolase TERM 2560 3470710 - 3470768 + g 79 -11 -3.96068 | gap 3 AGATGGGTTTGACCC CGGCCGCATTGAGCGCGCTGGCGGCCTGT CTGA GCAGGCTGTC-GC-TGC-CATAGCGGCCG TTCTTGTTGAAGTCG lamB 3471482 - 3472753 + | maltoporin Pmen_3138 3472879 - 3473802 + | maltose operon periplasmic TERM 2561 3473861 - 3473876 + T 100 -11.8 -5.75945 | CTCCAGGGAAATTCG GGCGGC CTAG GCCGCC TTTTTTTTCGAACCT Pmen_3139 3475841 - 3473919 - | methyl-accepting chemotaxis sensory transducer TERM 2562 3475998 - 3475978 - R 78 -6.7 -4.58685 | overlap 3475979 3475982 AAATTTCGTGAAAAA TCATCCGCC TGC GGCGGCTGT GCGTACCCGCCCCGT TERM 2563 3476004 - 3476026 + r 100 -17.7 -3.61398 | CGGCGGCTGTGCGTA CCCGCCCCG TAAGC CGGGGCGGG TTCTTCAGGGCGCGC Pmen_3140 3476894 - 3476031 - | aldo/keto reductase Pmen_3141 3477680 - 3477009 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Pmen_3142 3478395 - 3477682 - | 6-phosphogluconolactonase TERM 2564 3478092 - 3478138 + g 75 -15.4 -2.70932 | gap 3, opp_overlap 3478106 3478109, overlap 3478106 3478110 TCGCCTCGGAGGCCG CGCCACGCAGCAGATGACGGCGC ACCA GCGCC-TCGT-TGCTGC-TGGCG TGGTTGACCGGCACC Pmen_3143 3479848 - 3478382 - | glucose-6-phosphate 1-dehydrogenase TERM 2565 3479932 - 3479914 - H 70 -3.2 -4.70583 | opp_overlap 3479914 3479907 CTTATCAAGAGAAAA TGTTGT AATAAAA ACAACA TTTGTTCATTTTCCT Pmen_3144 3480051 - 3480920 + | DNA-binding transcriptional regulator HexR Pmen_3145 3481108 - 3482055 + | bile acid:sodium symporter Pmen_3146 3482200 - 3482514 + | small multidrug resistance protein Pmen_3147 3484472 - 3482598 - | phospholipid/glycerol acyltransferase TERM 2566 3484443 - 3484422 - G 82 -5.9 -4.72272 | gap 1 TTGCGTCACGAAAAA CGGCA-GAAA GCG CTTCTTGCCG AGCAGGGCGAATTGC TERM 2567 3484943 - 3484963 + H 76 -12.5 -3.31144 | opp_overlap 3484943 GCAGCGCAAAAAAAA CGGCAGCCC ATC GGGCTACCG TTCTCGAACTCGGAG TERM 2568 3484963 - 3484943 - H 100 -14.7 -5.78622 | opp_overlap 3484943 GCAGCGCAAAAAAAA CGGCAGCCC ATC GGGCTACCG TTCTCGAACTCGGAG TERM 2569 3485003 - 3484983 - H 82 -8.9 -4.4017 | overlap 3484984 CGAACTCGGAGAAAA CGCCAGTGC CTC GCACCGGCT ACAACCTCACCTGCA TERM 2570 3485002 - 3484984 - H 74 -12.4 -3.2362 | overlap 3484983 GAACTCGGAGAAAAC GCCAGTGC CTC GCACCGGC TACAACCTCACCTGC TERM 2571 3485120 - 3485104 - H 73 -9.3 -3.96542 | GCAAAGAAATGTAAA CGCCGGG TGA CCAGGCG GTCCCGGCCGCGGCA Pmen_3148 3485148 - 3485852 + | 4'-phosphopantetheinyl transferase TERM 2572 3486038 - 3485999 - T 88 -7.1 -5.00884 | gap 3, overlap 3486000 3486001 AGCGCCGGCAAAAAA TCGGTGCGCACGGCGCACCC TAC GGG-GCGG-G-GCGCACCGC GCCCTACTCCCCCTG TERM 2573 3486037 - 3486000 - T 73 -10.6 -3.60048 | gap 3, overlap 3485999 3486001 GCGCCGGCAAAAAAT CGGTGCGCACGGCGCACCC TAC GGG-GCGG-G-GCGCACCG CGCCCTACTCCCCCT TERM 2574 3486017 - 3486001 - T 73 -13.7 -2.75708 | overlap 3486000 3485999 CGCCGGCAAAAAATC GGTGCGC ACG GCGCACC CTACGGGGCGGGGCG Pmen_3149 3487682 - 3486042 - | integral membrane sensor signal transduction histidine kinase Pmen_3150 3488409 - 3487660 - | two component transcriptional regulator TERM 2575 3488539 - 3488568 + H 71 -5.6 -4.42386 | gap 1, opp_overlap 3488515, overlap 3488541 CCGTACGCTCGCCGG GC-GTTGCGGGCC GCCTA GGCGCGCACCTGC TTTTATGACTCCCCG Pmen_3151 3489275 - 3492181 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2576 3492629 - 3492610 - f 75 -13.6 -2.93382 | overlap 3492594 CTGTATATCCATACA GGCCGGTT CGCT AACCGGCC CTCACGCAGGAGCCA TERM 2577 3492729 - 3492709 - g 70 -8.2 -3.90112 | GCCGCCGCAAGCAAA GCCAACGC ACAGA GCGCCGGC ACCAATTTCGACAAG Pmen_3152 3492649 - 3493899 + | ribonucleotide-diphosphate reductase subunit beta TERM 2578 3493954 - 3494006 + F 95 -18.8 -3.32066 | opp_overlap 3493971, overlap 3493958 3493959 3493971 CATGGATGTTGGGGT TGAAGCTTGAATAGAAAGCCCCGC CTAGT GCGGGGCTTTTTATTTAAGGTTTA TTATGCACGATTCTT TERM 2579 3493958 - 3494002 + F 100 -17.4 -4.30987 | opp_overlap 3493971, overlap 3493954 3493959 3493971 GATGTTGGGGTTGAA GCTTGAATAGAAAGCCCCGC CTAGT GCGGGGCTTTTTATTTAAGG TTTATTATGCACGAT TERM 2580 3493959 - 3494001 + F 95 -20.9 -3.1811 | opp_overlap 3493971, overlap 3493958 3493954 3493971 ATGTTGGGGTTGAAG CTTGAATAGAAAGCCCCGC CTAGT GCGGGGCTTTTTATTTAAG GTTTATTATGCACGA TERM 2581 3493971 - 3493989 + F 100 -13.1 -5.29846 | opp_overlap 3493971, overlap 3493959 3493958 3493954 AAGCTTGAATAGAAA GCCCCGC CTAGT GCGGGGC TTTTTATTTAAGGTT TERM 2582 3493989 - 3493971 - f 95 -13.1 -4.20025 | opp_overlap 3493971 3493959 3493958 3493954 AAGCTTGAATAGAAA GCCCCGC CTAGT GCGGGGC TTTTTATTTAAGGTT TERM 2583 3494340 - 3494370 + G 78 -9.9 -4.07568 | opp_overlap 3494339 3494336 TGGGGGCAAGAGGAT TTATGCCCATCTT ACTGC AAGATGGACATAA TTTTAACGGAGCCCC Pmen_3153 3494009 - 3495322 + | hypothetical protein TERM 2584 3495471 - 3495446 - f 75 -8.3 -4.28049 | opp_overlap 3495445 CGGAAAAGCGGAAAA GGGGACAGA TTTATTTT TCCGTCCCC CTCCTCTACCGGTTT TERM 2585 3495780 - 3495792 + F 73 -10.5 -3.64703 | opp_overlap 3495775 3495777 3495776 CAAAGAGAAAGCGCG CCCGG CAT CCGGG TTTCGCTGCGCGAAA Pmen_3154 3496507 - 3496683 + | hypothetical protein Pmen_3155 3497006 - 3498067 + | aldo/keto reductase Pmen_3156 3498971 - 3498087 - | LysR family transcriptional regulator Pmen_3157 3499315 - 3499124 - | hypothetical protein Pmen_3158 3499634 - 3499299 - | hypothetical protein Pmen_3159 3500758 - 3499859 - | LysR family transcriptional regulator TERM 2586 3501517 - 3501502 - g 71 -3.2 -4.67353 | overlap 3501504 CGAGTCAGTCAAAAA GGCCTT GGGC AAGGTC GATGCGCTGGTGGCC Pmen_3160 3500879 - 3501580 + | NAD(P)H dehydrogenase (quinone) Pmen_3161 3502359 - 3501616 - | methyltransferase type 12 Pmen_3162 3502644 - 3503084 + | hypothetical protein TERM 2587 3503166 - 3503146 - f 86 -14.7 -3.31263 | opp_overlap 3503146 AGCGCAGCCCCACAA GGCCGGCCT GAT AAGCCGGCC TTTTTGTTTTCAGGG TERM 2588 3503146 - 3503166 + F 100 -12.5 -5.45802 | opp_overlap 3503146 AGCGCAGCCCCACAA GGCCGGCCT GAT AAGCCGGCC TTTTTGTTTTCAGGG Pmen_3163 3503299 - 3503646 + | protein of unknown function DUF861, cupin_3 Pmen_3164 3503815 - 3504291 + | proteinase inhibitor I11, ecotin Pmen_3165 3505050 - 3504406 - | hypothetical protein TERM 2589 3505904 - 3505873 - g 78 -13.8 -3.54029 | gap 1, opp_overlap 3505891, overlap 3505853 3505876 GTCGATGAAGGACAA CAACCAGAGCGC-CA ACC TGCGCGCCCTGGTCG AGGCCGGCGTGCGCT TERM 2590 3505901 - 3505876 - g 81 -11.9 -3.90241 | gap 1, opp_overlap 3505891, overlap 3505873 GATGAAGGACAACAA CCAGAGCGC-CA ACC TGCGCGCCCTGG TCGAGGCCGGCGTGC Pmen_3166 3505208 - 3507217 + | peptidase U32 Pmen_3167 3507610 - 3507314 - | antibiotic biosynthesis monooxygenase Pmen_3168 3507765 - 3508352 + | NAD(P)H dehydrogenase (quinone) Pmen_3169 3509198 - 3508359 - | Allergen V5/Tpx-1 family protein Pmen_3170 3509407 - 3509772 + | hypothetical protein TERM 2591 3509773 - 3509813 + F 93 -17 -3.30124 | gap 2, opp_overlap 3509778, overlap 3509775 3509779 TGGTTGCAGCAATGA GGCAA-GCG-CGCTGCCGAG CGC CTCGGCAGCGCCTCGTTGCC TTGTCGCACATGGGG TERM 2592 3509775 - 3509808 + F 89 -17.5 -3.23274 | gap 1, opp_overlap 3509778, overlap 3509773 3509779 GTTGCAGCAATGAGG CAAGCGCGCTGCCGAG CGC CTCGGCAGCGC-CTCG TTGCCTTGTCGCACA TERM 2593 3509805 - 3509778 - f 90 -17.8 -3.14136 | gap 1, opp_overlap 3509775 3509773 3509779 GCAGCAATGAGGCAA GCGCGCTGCCGAG CGC CTCGGCAGCGC-C TCGTTGCCTTGTCGC TERM 2594 3509779 - 3509805 + F 86 -18 -2.80511 | opp_overlap 3509778, overlap 3509775 3509773 CAGCAATGAGGCAAG CGCGCTGCCGAG CGC CTCGGCAGCGCC TCGTTGCCTTGTCGC Pmen_3171 3509926 - 3510207 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2595 3510217 - 3510243 + F 84 -17.3 -2.73123 | gap 1, overlap 3510206 3510221 GACTGATGATGCCAA GGGCGCGGCCGC CACG GCGGCC-CGCCC TCGTTCCCGCCTTTT TERM 2596 3511003 - 3510990 - g 75 -3.1 -4.82901 | overlap 3510991 CCTGCGCGAGAAAAA TGAAG GCAC CTCCA TCCAGACGTCGCGCA Pmen_3172 3510286 - 3511842 + | diguanylate cyclase Pmen_3173 3512759 - 3511866 - | hypothetical protein Pmen_3174 3512937 - 3513671 + | hypothetical protein TERM 2597 3513752 - 3513717 - T 74 -11 -3.51924 | overlap 3513718 GCTGTATCCATAGAA GCCGGTGCGCGCATGG CGCA CCCTACGCGCAACGGT CCGTAGGGTGCGCCG TERM 2598 3513776 - 3513718 - T 84 -16.8 -2.7094 | gap 3, overlap 3513717 CTGTATCCATAGAAG CCGGTGCGCGCATGGCGCACCCTACGCGC AACG GTCCGTAGGGTGCGCC--GTGCGCACCG- CCGCACTAGCAACGC Pmen_3175 3514839 - 3513796 - | hypothetical protein Pmen_3176 3515618 - 3514908 - | NADP oxidoreductase, coenzyme F420-dependent Pmen_3177 3515846 - 3515977 + | hypothetical protein Pmen_3178 3516149 - 3516850 + | hypothetical protein Pmen_3179 3516893 - 3517282 + | NUDIX hydrolase TERM 2599 3517331 - 3517343 + F 71 -6.9 -4.24342 | opp_overlap 3517331 AAGCGGCGGCAAGAA CCGCT CCC GGCGG TTTCTTGATCCACGG Pmen_3180 3517451 - 3517780 + | hypothetical protein Pmen_3181 3518798 - 3517890 - | FHA domain-containing protein TERM 2600 3518481 - 3518512 + g 78 -10 -4.08767 | gap 1, opp_overlap 3518478 3518481 CACCTGGAGAAACCA GCGCGGCGCGG-CGG CTT CCGGCCTGGCTGCGC TTTTCGCCGGGTCGA Pmen_3182 3520298 - 3518814 - | protein kinase TERM 2601 3519289 - 3519325 + g 78 -14.3 -3.53012 | opp_overlap 3519278, overlap 3519290 3519314 TAATCGGCGTTGTCC TGCGCCGGAGCGAGCAG GCG CCCCTCGCTCAGGCGCG TTTCCGCCAGCGCGA TERM 2602 3519290 - 3519324 + g 75 -15.6 -2.71712 | opp_overlap 3519278, overlap 3519289 3519314 AATCGGCGTTGTCCT GCGCCGGAGCGAGCAG GCG CCCCTCGCTCAGGCGC GTTTCCGCCAGCGCG Pmen_3183 3521139 - 3520315 - | protein phosphatase 2C domain-containing protein Pmen_3184 3521245 - 3521655 + | GCN5-related N-acetyltransferase Pmen_3185 3521761 - 3522804 + | diguanylate cyclase Pmen_3186 3523134 - 3522808 - | hypothetical protein TERM 2603 3522950 - 3522979 + g 73 -12.1 -3.45023 | gap 1, overlap 3522950 TCCTGCCGCACGCTG CC-CTGCGGCAGGC GCT GCCCGCCGTAGAGG TTGTGCTGCTCGTAA TERM 2604 3523170 - 3523150 - R 72 -11.1 -3.3344 | AGGCAACTCCCAGAA GGCTCGGCC TGC AGCCAAGCC AAGATGCACATTAGC TERM 2605 3523233 - 3523262 + r 82 -9.3 -4.30576 | opp_overlap 3523234 3523238, overlap 3523234 CTGAGGCCCCATACG ACAAAGGGCTAGC CGAA GCTAACCCTTTGA TTTTCATGGTGCCGG TERM 2606 3523261 - 3523234 - R 76 -15 -2.62616 | opp_overlap 3523233 3523234, overlap 3523238 TGAGGCCCCATACGA CAAAGGGCTAGC CGAA GCTAACCCTTTG ATTTTCATGGTGCCG TERM 2607 3523234 - 3523261 + r 74 -12.8 -3.18024 | opp_overlap 3523234 3523238, overlap 3523233 TGAGGCCCCATACGA CAAAGGGCTAGC CGAA GCTAACCCTTTG ATTTTCATGGTGCCG TERM 2608 3523257 - 3523238 - R 80 -10 -4.0162 | opp_overlap 3523234 3523233, overlap 3523234 GCCCCATACGACAAA GGGCTAGC CGAA GCTAACCC TTTGATTTTCATGGT Pmen_3187 3524242 - 3523400 - | GntR family transcriptional regulator Pmen_3188 3524483 - 3524674 + | hypothetical protein Pmen_3189 3525919 - 3524774 - | glucose sorbosone dehydrogenase Pmen_3190 3526683 - 3526003 - | extracellular solute-binding protein TERM 2609 3527828 - 3527791 - g 89 -19.1 -2.82519 | overlap 3527784 3527788 TGAGCACATCAAGGA TGCCGTGGCGGCCGCCG CCAG CGGCGAGCGCGACGGCA AGATCCTGCTGGTGC Pmen_3191 3526871 - 3527848 + | alcohol dehydrogenase TERM 2610 3527851 - 3527890 + T 81 -16.5 -2.87931 | gap 1, opp_overlap 3527854 GCTGGTGCCCTGAGA TGAGTGCGCATGGCGCAC CCTAC GTGCGCCGTGCGCGC-CG TCTGTGGCGCCTGCG TERM 2611 3527888 - 3527854 - T 83 -17.1 -2.62184 | opp_overlap 3527851 GGTGCCCTGAGATGA GTGCGCATGGCGCAC CCTAC GTGCGCCGTGCGCGC CGTCTGTGGCGCCTG Pmen_3192 3529401 - 3528073 - | major facilitator transporter Pmen_3193 3529679 - 3531847 + | hypothetical protein Pmen_3194 3531902 - 3534082 + | diguanylate cyclase/phosphodiesterase Pmen_3195 3535161 - 3534370 - | hydroxypyruvate isomerase TERM 2612 3534551 - 3534500 - G 100 -20.2 -4.11751 | gap 1 AGTAACGGCGCAAAA TCCAGCTCACCGCTGC-CCGGGGCG CCG CGCCCCGGCACATCGGCGAACTGCA CGTGACCGATGCGCC TERM 2613 3534905 - 3534956 + g 77 -16.4 -2.75064 | gap 1, overlap 3534903 GCCTCCTGCAGGGCG GCGTCGAACTCGGCCTGGCGCGCCG GCA CGCTG-GCCAGGCCGGGCCCGCCGC TCATTAGGTCGCCCG Pmen_3196 3536042 - 3535152 - | 3-hydroxyisobutyrate dehydrogenase Pmen_3197 3536178 - 3537029 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein Pmen_3198 3537026 - 3537826 + | ABC transporter related Pmen_3199 3537820 - 3538647 + | phosphonate ABC transporter, inner membrane subunit Pmen_3200 3538644 - 3539405 + | phosphonate ABC transporter, inner membrane subunit Pmen_3201 3540066 - 3539518 - | AraC family transcriptional regulator Pmen_3202 3541935 - 3540433 - | aldehyde dehydrogenase TERM 2614 3542026 - 3542080 + r 89 -17.1 -3.21416 | gap 1, overlap 3542037 CTCTCCCCTCCGGGC GCCATCTGCCGGCACGCCGG-GAGTG CTTT CGCTCTCCGGGATGCCGGCACAAGGC TTGGTCCTCGCGATC Pmen_3203 3542675 - 3542103 - | hypothetical protein Pmen_3204 3544684 - 3542972 - | Fis family transcriptional regulator TERM 2615 3543268 - 3543256 - G 70 -2.6 -4.70879 | GGGAAACCGCAAAAA GAGC GTCCT GCCC TATGGTTTCATTGCT Pmen_3205 3546050 - 3545313 - | short-chain dehydrogenase/reductase SDR Pmen_3206 3547113 - 3546184 - | LysR family transcriptional regulator TERM 2616 3547374 - 3547356 - R 71 -8.8 -3.72893 | opp_overlap 3547372, overlap 3547357 CATGCTGCGAGCAAA TCGCTGCA GCA TGCAGCGC CGTGCAAACGGGGTT Pmen_3207 3547699 - 3547409 - | hypothetical protein Pmen_3208 3548514 - 3547696 - | NAD(P)H dehydrogenase (quinone) TERM 2617 3547802 - 3547825 + g 81 -11 -4.07568 | TGCGGTTTAAGCTCG TGGCGGGG CGTATAGT CCCCGCCA TTTTGGGGCCGGAAG TERM 2618 3548931 - 3548905 - g 73 -13.7 -3.16564 | opp_overlap 3548903 GCCTGACCGTATCAA TCGCCTGCACG GATTA CGTGCAGGCGG CCTTGATCAAGCATC Pmen_3209 3548604 - 3549542 + | LysR family transcriptional regulator Pmen_3210 3551386 - 3549764 - | major facilitator transporter TERM 2619 3550107 - 3550117 + g 70 -2.4 -4.62069 | TCCGAAATGGCTGAG GCTG ATC CCGC TTTTTCACCTGGCGC TERM 2620 3551576 - 3551522 - g 77 -13.5 -3.51411 | overlap 3551519 3551566 ATCGTCGGAAACTAA CGCCAG-CCGATGTCGGGCTGCCGTCC CAC GGGCGGC-GCCGAACACCGGGCCTGCG CAGAGAAGAAGTCGC Pmen_3211 3551449 - 3552240 + | XRE family transcriptional regulator TERM 2621 3552355 - 3552297 - T 100 -16.8 -4.2008 | gap 1, opp_overlap 3552301 3552309 ACAGATTTGAACAAA CCGTGCGCTTCCGGCCGG-TAGCGGTC CTGTGT GACAGGTAACCGGCCAGAAACGCAAGG TCAGCCCTTATTCGA Pmen_3212 3552797 - 3552363 - | glutathione-dependent formaldehyde-activating, GFA Pmen_3213 3552906 - 3553790 + | LysR family transcriptional regulator Pmen_3214 3554721 - 3553849 - | AraC family transcriptional regulator Pmen_3215 3554859 - 3555614 + | short-chain dehydrogenase/reductase SDR TERM 2622 3555668 - 3555635 - f 100 -16 -4.08394 | gap 1 AGACGCGCGCCAAAA CTGG-GCCGGGCGCC CGCGT GGCGCCCTGCTCCAG GCCGCGGCATGCGCG Pmen_3216 3555936 - 3556787 + | Ku domain-containing protein TERM 2623 3556849 - 3556907 + G 73 -14.4 -3.21099 | opp_overlap 3556852 3556892, overlap 3556852 3556896 AACGCAATTTCGAAC GCACCAGCGAGCCGGCCGAGC-GCACCG GCAAG CGGCGCAGCAAGGCCGGCGCGCT-GCGC TTCGTGGTGCAGAAG TERM 2624 3556905 - 3556852 - g 85 -18 -2.53911 | gap 1, opp_overlap 3556849 3556852 3556896, overlap 3556892 GCAATTTCGAACGCA CCAGCGAGCCGGCCGAGC-GCACCG GCAAG CGGCGCAGCAAGGCCGGCGCGCTGC GCTTCGTGGTGCAGA TERM 2625 3556852 - 3556906 + G 73 -15.6 -2.52516 | gap 2, opp_overlap 3556852 3556892, overlap 3556849 3556896 GCAATTTCGAACGCA C-CAGCGAGCCGGCCGAGC-GCACCG GCAAG CGGCGCAGCAAGGCCGGCGCGCTGCG CTTCGTGGTGCAGAA ligD 3556803 - 3559316 + | ATP-dependent DNA ligase Pmen_3218 3561161 - 3559506 - | methyl-accepting chemotaxis sensory transducer TERM 2626 3561370 - 3561402 + H 70 -9.9 -3.48395 | gap 2 ACTACCGCAGCGGTG GCCTGGTCTGCCTGC CTGGT GCAGGC-G-CCGGGC TTCTGTCGACGCCCT Pmen_3219 3561592 - 3562035 + | MerR family transcriptional regulator Pmen_3220 3563208 - 3562156 - | hypothetical protein Pmen_3221 3563404 - 3564639 + | NADH:flavin oxidoreductase/NADH oxidase Pmen_3222 3564796 - 3564969 + | hypothetical protein TERM 2627 3565012 - 3564970 - T 93 -16.5 -3.52539 | gap 1, overlap 3564971 3564998 CAAGCGCAAGGATAA GCCGAGGCTGTTGCCGTTTC GACC GAAACGGCAACAGCTTCA-C AGCCCCTGCCGCGCC TERM 2628 3565012 - 3564971 - T 84 -16.7 -2.71041 | overlap 3564970 3564998 AAGCGCAAGGATAAG CCGAGGCTGTTGCCGTTTC GACC GAAACGGCAACAGCTTCAC AGCCCCTGCCGCGCC Pmen_3223 3567317 - 3565272 - | oxidoreductase FAD-binding subunit TERM 2629 3566778 - 3566757 - G 77 -3.7 -4.72272 | gap 1, opp_overlap 3566761, overlap 3566758 3566761 GCTGGCGACGAAAAA GGT-ATCGGC GCT GCCGATCATC TCGGCGCTGCGCGCA TERM 2630 3567236 - 3567252 + g 74 -7.9 -4.28361 | CGAGCACTTCCATGC GTTCGGC GAC GCCGACC TTTTCCTGCAGTTGC TERM 2631 3567363 - 3567336 - R 100 -19.8 -3.72576 | opp_overlap 3567326 3567325 CTGCCCTCCATGAAA GCGGCCGCCGGG CGAT CCCGGCGGCGGC AATAGGGCGCTTCTA Pmen_3224 3568140 - 3567514 - | glutathione S-transferase domain-containing protein Pmen_3225 3569167 - 3568277 - | LysR family transcriptional regulator Pmen_3226 3570087 - 3569164 - | LysR family transcriptional regulator TERM 2632 3570161 - 3570127 - R 70 -10.7 -3.47078 | gap 1 GAGGGCACAGGATAA CGCCTCAGCGCCTG CTCAATGC CAGGCGC-GCGGCG AACAGCAGGAAGATC Pmen_3227 3570751 - 3570131 - | lysine exporter protein LysE/YggA TERM 2633 3570383 - 3570370 - G 70 -3.8 -4.45485 | overlap 3570361 3570371 3570372 AGGACAGGTAGAAAA TCCC CACCTT GGGA TTGAGCACGTTGCCC TERM 2634 3570751 - 3570781 + g 71 -12.5 -3.28791 | opp_overlap 3570747 TTTCGGCAAAGGGCA TCGGCGCAGGCTC CGTCT GAGCAGGCGCCGA TTATAGACAGGGCAT Pmen_3228 3572076 - 3570889 - | acetyl-CoA acetyltransferase Pmen_3229 3573751 - 3572261 - | hypothetical protein mnmC 3573898 - 3575871 + | 5-methylaminomethyl-2-thiouridine methyltransferase Pmen_3231 3577956 - 3575893 - | TonB-dependent siderophore receptor TERM 2635 3578072 - 3578062 - R 93 -5.4 -5.45726 | CAGATGCTAAAAAAA TCCA TTA TGGA CACCGACATCCACCC Pmen_3232 3578993 - 3578088 - | hypothetical protein TERM 2636 3579993 - 3580017 + G 70 -6.4 -4.25283 | CCGCCCTGCCCTTGT TCGAGCTGCT GCATG GGCAGATCGA TTTTGCTGAAAGCCT Pmen_3233 3579143 - 3581029 + | UvrD/REP helicase TERM 2637 3581075 - 3581088 + T 79 -9.5 -4.15222 | opp_overlap 3581075 GCAGCCAACAAAAAA CCCGC CTAA GCGGG TTTCTTCCCAACCAT TERM 2638 3581088 - 3581075 - T 100 -9.5 -5.4833 | opp_overlap 3581075 GCAGCCAACAAAAAA CCCGC CTAA GCGGG TTTCTTCCCAACCAT Pmen_3234 3581794 - 3581261 - | cytochrome B561 TERM 2639 3581983 - 3581947 - R 83 -17.4 -2.56914 | gap 1, overlap 3581943 3581966 TATGTCACCAAGGCA TCACGGCACGCCGCTAC AAGC GCAGCAGCGTGCCG-GA CGATCAGGCGTCGCG Pmen_3235 3584524 - 3581987 - | glucosyltransferase MdoH mdoG 3586052 - 3584517 - | glucan biosynthesis protein G Pmen_3237 3588618 - 3586312 - | glycoside hydrolase family 3 protein TERM 2640 3588725 - 3588699 - H 100 -8.6 -5.44119 | opp_overlap 3588668 GGCAGTGCAAAAAAA CCGGAGCACGAC CCA GCGGCGCTCCAG CTATTGAGACCCCGG TERM 2641 3588745 - 3588758 + H 100 -8.1 -5.75342 | TGAGACCCCGGTTTT GCGCA AACT TGCGC TTTTTTTTCGCCGCC TERM 2642 3589578 - 3589630 + G 70 -10.6 -3.5394 | gap 1, overlap 3589579 CTGCTGCGTCAGTCC GCGCTGCCGCTGGGCGAAATCGC CCTGGACA GCGGTTTCGCC-AGCGCCAGCCA TTTCAGCAACCGTTT Pmen_3238 3588825 - 3589697 + | AraC family transcriptional regulator TERM 2643 3589954 - 3589941 - g 74 -2.3 -4.72986 | overlap 3589942 TATGCCGAGGAAAAA CGCAG CAAA CTGCT CAGCCTCAAGGACAA TERM 2644 3591222 - 3591206 - g 75 -9.4 -4.07885 | overlap 3591207 3591209 TATCCTCTGCGAAAA GCAGGC CGGGC GCCTGC AGCAACCGGCGCTGA Pmen_3239 3589845 - 3592475 + | non-specific serine/threonine protein kinase TERM 2645 3592493 - 3592513 + T 85 -12.5 -3.76224 | overlap 3592494 CCACCCCGCACGATT ACGGTGCGC AGC GCGCACCGG TTTCCTCAATCCGCG TERM 2646 3592494 - 3592512 + T 81 -16 -2.8552 | overlap 3592493 CACCCCGCACGATTA CGGTGCGC AGC GCGCACCG GTTTCCTCAATCCGC Pmen_3240 3593013 - 3592519 - | phosphate-starvation-inducible E TERM 2647 3593144 - 3593132 - H 71 -6.9 -4.2717 | opp_overlap 3593136, overlap 3593121 3593136 AGGATGTGACCAAAA GCCAC AGC GCGGC CGGTTTTCGCAAGCA Pmen_3241 3593300 - 3593563 + | YebG family protein TERM 2648 3593577 - 3593603 + T 100 -12.3 -5.14563 | gap 1 GAACCAATCCCCTTG GCCCCGCCGTTC GCCC GGACG-CGGGGC TTTTTTAATAGCGCG Pmen_3242 3593985 - 3593734 - | hypothetical protein Pmen_3243 3594292 - 3594696 + | hypothetical protein Pmen_3244 3594983 - 3595849 + | hypothetical protein TERM 2649 3595880 - 3595850 - T 86 -14.6 -3.33261 | CCGCAAGGCCGATAA GTCCCGGCCCGGCG TCA CGCCGGGCCATCAC TCCGGCTGCTGCAGC Pmen_3245 3596983 - 3595877 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Pmen_3246 3598057 - 3597053 - | transketolase, central region Pmen_3247 3599138 - 3598050 - | pyruvate dehydrogenase (acetyl-transferring) Pmen_3248 3600261 - 3599239 - | Glu/Leu/Phe/Val dehydrogenase, dimerisation region Pmen_3249 3600362 - 3601165 + | hypothetical protein Pmen_3250 3601322 - 3601993 + | hypothetical protein Pmen_3251 3602074 - 3602427 + | hypothetical protein Pmen_3252 3602431 - 3603390 + | secretion protein HlyD family protein Pmen_3253 3603452 - 3603820 + | hypothetical protein TERM 2650 3604460 - 3604476 + G 74 -10.1 -3.87815 | TCGCGCAAAGCATTC CGCTCAC TCT GTGGGCG TTTCTCGGCATGGAG Pmen_3254 3603871 - 3605199 + | putrescine transporter Pmen_3255 3605211 - 3606104 + | extracellular solute-binding protein Pmen_3256 3606469 - 3606113 - | type IV pilus assembly PilZ TERM 2651 3606378 - 3606394 + g 82 -12.3 -3.93695 | TCCAGGGAGACATTG CCGATGG AGC CCATCGG TTTGTCGGTGATGCG Pmen_3257 3606951 - 3606529 - | hypothetical protein Pmen_3258 3607398 - 3607024 - | hypothetical protein Pmen_3259 3607551 - 3608357 + | hypothetical protein TERM 2652 3608414 - 3608403 - f 74 -3.6 -4.74103 | overlap 3608405 3608406 TCTGTAATTCAAAAA CACC CCCA GGCG AGGCCACTGCCATGA Pmen_3260 3608426 - 3609334 + | UspA domain-containing protein Pmen_3261 3609407 - 3610858 + | pyruvate kinase TERM 2653 3610873 - 3610901 + T 100 -11.8 -4.82901 | opp_overlap 3610863 3610878, overlap 3610878 AGTGATCTGCACATG CAAAAGGCCGCT CGATA AGCGGCCTTTTC TTTTTGTAGCCGGCG TERM 2654 3610896 - 3610878 - T 95 -12.4 -4.2349 | opp_overlap 3610873 3610878 TCTGCACATGCAAAA GGCCGCTC GAT AAGCGGCC TTTTCTTTTTGTAGC TERM 2655 3610878 - 3610896 + T 100 -11.7 -5.35224 | opp_overlap 3610878, overlap 3610873 TCTGCACATGCAAAA GGCCGCT CGATA AGCGGCC TTTTCTTTTTGTAGC Pmen_3262 3611863 - 3611090 - | enoyl-CoA hydratase/isomerase Pmen_3263 3612893 - 3611955 - | hypothetical protein Pmen_3264 3614013 - 3612886 - | diguanylate cyclase TERM 2656 3614135 - 3614155 + H 88 -3.1 -5.4833 | overlap 3614127 3614137 GTGCCCTGTGCGACC GTCGCGCTA TAC TGCCGCGCC TTTTTTGTTGCCTGC TERM 2657 3614239 - 3614260 + H 70 -10.1 -3.4706 | overlap 3614231 3614230 CCATTTTTCGCCGTT GCGCCGGGT TCTG ATTCGGCGC TTCCTTATAGATGTT TERM 2658 3614436 - 3614414 - g 70 -12 -3.35813 | GCCTACCTGAAGGAA GAGTCCCCGG CGG CCAAGGACTC CATGGCGCAGATCCT Pmen_3265 3614297 - 3615820 + | fumarase TERM 2659 3615868 - 3615837 - T 90 -15.3 -3.57561 | gap 1, opp_overlap 3615837 3615844, overlap 3615844 CGTCAAGGCTGCAAA GCAAAAAGCCCGGC CATGT GCCGGGCTTTT-GC GTTTTCAGGCGCCCT TERM 2660 3615837 - 3615868 + T 80 -15.3 -3.04517 | gap 1, opp_overlap 3615837 3615844, overlap 3615844 CGTCAAGGCTGCAAA GCAAAAAGCCCGGC CATGT GCCGGGCTTTT-GC GTTTTCAGGCGCCCT TERM 2661 3615844 - 3615862 + T 100 -13.1 -4.4267 | opp_overlap 3615844 3615837, overlap 3615837 GCTGCAAAGCAAAAA GCCCGGC CATGT GCCGGGC TTTTGCGTTTTCAGG TERM 2662 3615862 - 3615844 - T 100 -13.1 -4.98531 | opp_overlap 3615837 3615844, overlap 3615837 GCTGCAAAGCAAAAA GCCCGGC CATGT GCCGGGC TTTTGCGTTTTCAGG Pmen_3266 3617222 - 3615882 - | D-serine dehydratase Pmen_3267 3617362 - 3618036 + | hypothetical protein Pmen_3268 3618327 - 3619661 + | Beta-xylosidase-like protein Pmen_3269 3620765 - 3619656 - | AFG1 family ATPase Pmen_3270 3621655 - 3620771 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pmen_3271 3622242 - 3621652 - | hypothetical protein TERM 2663 3621718 - 3621679 - G 70 -12 -3.35679 | CTCCTTCAGCCAGAA CGACATGGGCTTGGCCGA CTCC TCGGCCTCGTCCAAGTCG CGCCAGTGGTAACGG TERM 2664 3621884 - 3621860 - G 70 -11.3 -3.62096 | overlap 3621844 3621861 GCGCACCAGTCGAAA TGGCCCAGGCG CCG CGCGTGGGCCT CGCGCTCGGCGAAGA TERM 2665 3621883 - 3621861 - G 72 -14.8 -2.77043 | overlap 3621844 3621860 CGCACCAGTCGAAAT GGCCCAGGCG CCG CGCGTGGGCC TCGCGCTCGGCGAAG Pmen_3272 3622355 - 3622756 + | hypothetical protein TERM 2666 3622931 - 3622910 - T 73 -8.7 -3.91897 | gap 1 CGCCCCAGCCAGAAA CCCGCTGCCG CAC CGG-AGCAGG AACATCCGAATTTCT Pmen_3273 3623264 - 3622962 - | hypothetical protein Pmen_3274 3623939 - 3623358 - | PfpI family intracellular peptidase TERM 2667 3623411 - 3623395 - G 73 -10.8 -3.73953 | opp_overlap 3623403, overlap 3623396 AGCAGCTTGAGGAAA CCGGCC AGCCA GGCCGG GTGCGCAGGCCAGGC Pmen_3275 3624657 - 3624049 - | hypothetical protein TERM 2668 3624382 - 3624361 - G 75 -13.7 -3.30441 | gap 1, opp_overlap 3624353 3624353 CAGCAGTGTCCAGAA GCTGCCGGCC AGA GGCCGGC-GC ATCTCCAGCTTGTAG Pmen_3276 3625472 - 3624735 - | enoyl-CoA hydratase TERM 2669 3625552 - 3625533 - R 100 -15 -4.8622 | TGGCTGAACGAAAAA GGCCGGCA TCAC TGCCGGCC TTCGAGCCTAATCTG Pmen_3277 3626510 - 3625599 - | short-chain dehydrogenase/reductase SDR TERM 2670 3626589 - 3626577 - R 76 -10.5 -3.78934 | CGCGCTTCACAAGAA GGCGC GGG GCGCC TGAATGACGGCCGAT Pmen_3278 3626941 - 3626624 - | hypothetical protein Pmen_3279 3627593 - 3627063 - | hypothetical protein Pmen_3280 3628480 - 3627572 - | alpha/beta hydrolase fold TERM 2671 3627865 - 3627851 - G 70 -11.4 -3.38088 | opp_overlap 3627862 AATGTAGCGAATCAA GCGGTG CAT CACCGC CGGGCCGTTGTTGCA Pmen_3281 3629262 - 3628477 - | hypothetical protein Pmen_3282 3629884 - 3629417 - | hypothetical protein Pmen_3283 3630335 - 3629886 - | flavodoxin Pmen_3284 3630438 - 3630884 + | putative PAS/PAC sensor protein Pmen_3285 3630950 - 3631558 + | hypothetical protein Pmen_3286 3632541 - 3631576 - | MerR family transcriptional regulator Pmen_3287 3632856 - 3633422 + | antibiotic biosynthesis monooxygenase TERM 2672 3633460 - 3633442 - f 74 -11.7 -3.53012 | opp_overlap 3633442 GCCGTCTTCCGCAAA GGCCAGC CTCGC GCTGGCC TTTTTTGTTCGCCGC TERM 2673 3633442 - 3633460 + F 100 -11.7 -5.4505 | opp_overlap 3633442 GCCGTCTTCCGCAAA GGCCAGC CTCGC GCTGGCC TTTTTTGTTCGCCGC Pmen_3288 3633738 - 3634448 + | short chain dehydrogenase Pmen_3289 3634471 - 3635031 + | GTP cyclohydrolase folX 3635031 - 3635402 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase Pmen_3291 3635478 - 3635771 + | hypothetical protein Pmen_3292 3635768 - 3636109 + | hypothetical protein TERM 2674 3636113 - 3636089 - f 74 -12.2 -3.22491 | overlap 3636078 3636077 3636090 AAATTCGAGCAGGAA CCGCTCAAGC GCAAG GCTTGAGCGA ATAGCGCAAAAACCT TERM 2675 3636112 - 3636090 - f 72 -13.5 -2.53012 | overlap 3636078 3636077 3636089 AATTCGAGCAGGAAC CGCTCAAGC GCAAG GCTTGAGCG AATAGCGCAAAAACC Pmen_3293 3636272 - 3636859 + | hypothetical protein Pmen_3294 3637278 - 3636949 - | branched-chain amino acid transport Pmen_3295 3638054 - 3637278 - | AzlC family protein TERM 2676 3638271 - 3638236 - g 73 -14 -3.21099 | gap 1 GCTTGCGAGCAGCAA CCGCGCTTCACCGCGGC GGA ACCG-GGCGAAGCGCTG TCGGCCGGCACAGCC TERM 2677 3639087 - 3639048 - g 73 -12.1 -3.4072 | gap 1, overlap 3639049 GATCCCCCATGACAA CTGCACCGCGGCGCAGGC CGACT GCCTG-GCCGCGCCGCAC GGCGGCGAACCGGAG TERM 2678 3639086 - 3639049 - g 74 -15.6 -2.64218 | gap 1, overlap 3639048 ATCCCCCATGACAAC TGCACCGCGGCGCAGGC CGACT GCCTG-GCCGCGCCGCA CGGCGGCGAACCGGA Pmen_3296 3638170 - 3639582 + | hypothetical protein TERM 2679 3640290 - 3640265 - g 79 -7.6 -4.44667 | GGCCTGAAGAAGAAA CTC-GGCGCGCC CATG GGC-CGCCAGAG CAAGGGCATTCCCCA TERM 2680 3640400 - 3640354 - g 80 -17.3 -2.78216 | gap 1, overlap 3640351 CAGCCTGAGCAACCA GGCTGCCGCCCTGGCCAGCGCC GAAC GGCTCTGGC-ACGGCAGCAACC GCGACGGCATCCAGT Pmen_3297 3639593 - 3640654 + | periplasmic lipoprotein-like protein Pmen_3298 3640657 - 3641760 + | hypothetical protein TERM 2681 3642626 - 3642659 + G 77 -11 -3.81488 | GGACGGCTACTACGG GCTGTCCAAGTCCT ACGGCG AGGACATGGCCAGC TTCTATTTCGACCGC Pmen_3299 3642189 - 3643016 + | NAD-dependent epimerase/dehydratase TERM 2682 3643290 - 3643232 - g 72 -11.8 -3.53811 | gap 4, opp_overlap 3643233, overlap 3643233 GGCAGGCCGGGGAAA TGCTCGC-CTGCATCGCCCGCCACCCGGCC GGC GGCTGGCTGGCCGGC-ATGCAGAGCG-GC- CTCTTCCATCTGCAT TERM 2683 3643290 - 3643233 - g 85 -17.8 -2.72144 | gap 3, opp_overlap 3643233, overlap 3643232 GCAGGCCGGGGAAAT GCTCGC-CTGCATCGCCCGCCACCCGGCC GGC GGCTGGCTGGCCGGC-ATGCAGAGCG-GC CTCTTCCATCTGCAT TERM 2684 3643233 - 3643291 + G 90 -18.9 -3.12803 | opp_overlap 3643232 3643233 GCAGGCCGGGGAAAT GCTCGC-CTGCATCGCCCGCCACCCGGCC GGC GGCTGGCTGGCCGGC-ATGCAGAGCGGCC TCTTCCATCTGCATC Pmen_3300 3643072 - 3643947 + | gluconolactonase Pmen_3301 3644026 - 3645000 + | TRAP dicarboxylate transporter, DctP subunit TERM 2685 3645054 - 3645001 - f 78 -13.2 -3.14881 | gap 3 GAAGCCGTTCAGTAA TCCACGCGCAAGCGCGCGGCGCAGGCC ATC GGTCTGCGCCGCGC-CAC-CG-GTGAA ATCCGATGAAAAACC TERM 2686 3645078 - 3645068 - g 74 -2.4 -4.75404 | opp_overlap 3645077 AAATCCGATGAAAAA CCTG GTT CTGG GCGTCAACGACGCCA Pmen_3302 3645060 - 3645587 + | tripartite ATP-independent periplasmic transporter DctQ Pmen_3303 3645587 - 3646867 + | TRAP dicarboxylate transporter, DctM subunit TERM 2687 3646897 - 3646916 + F 77 -15 -2.70354 | overlap 3646894 3646893 ACACCGATGCATCTC GAGCCGCC GCCT GGCGGCTC TCGCTTTATAAGGAC Pmen_3304 3646945 - 3647847 + | hypothetical protein Pmen_3305 3648694 - 3647939 - | GntR family transcriptional regulator Pmen_3306 3648795 - 3649670 + | aldose 1-epimerase TERM 2688 3649711 - 3649725 + F 73 -10 -3.65542 | opp_overlap 3649689, overlap 3649709 CGATAATACGCGCAA GTTGCC TCC GGCAAC TGTTTTCAAAGTCAA Pmen_3307 3649914 - 3650126 + | hypothetical protein Pmen_3308 3651835 - 3650351 - | protein of unknown function DUF853, NPT hydrolase putative Pmen_3309 3651991 - 3653868 + | methyl-accepting chemotaxis sensory transducer TERM 2689 3653909 - 3653881 - T 93 -15.4 -3.48924 | gap 1, opp_overlap 3653884 3653887, overlap 3653884 3653887 TGAGCCTCCATACAA CG-AGAAGGGCGC CGCG GCGCCCTTCTTCG TTATCGCTCATGCTC TERM 2690 3653905 - 3653884 - T 81 -15.9 -2.88822 | opp_overlap 3653884 3653887, overlap 3653881 3653887 GCCTCCATACAACGA GAAGGGCGC CGCG GCGCCCTTC TTCGTTATCGCTCAT TERM 2691 3653884 - 3653905 + T 93 -15.9 -3.46212 | opp_overlap 3653884 3653881 3653887, overlap 3653887 GCCTCCATACAACGA GAAGGGCGC CGCG GCGCCCTTC TTCGTTATCGCTCAT TERM 2692 3653902 - 3653887 - T 77 -11.8 -3.59023 | opp_overlap 3653884 3653887, overlap 3653884 3653881 TCCATACAACGAGAA GGGCGC CGCG GCGCCC TTCTTCGTTATCGCT TERM 2693 3653887 - 3653902 + T 82 -11.8 -3.86312 | opp_overlap 3653887 3653884 3653881, overlap 3653884 TCCATACAACGAGAA GGGCGC CGCG GCGCCC TTCTTCGTTATCGCT Pmen_3310 3654089 - 3653910 - | hypothetical protein Pmen_3311 3654531 - 3654106 - | CBS domain-containing protein purU 3655428 - 3654577 - | formyltetrahydrofolate deformylase TERM 2694 3655825 - 3655814 - g 83 -4.4 -5.11033 | GACAAGCTGAAAAAA GAAC TGGA GTTC GAAGGCAAGCTGCGC Pmen_3313 3655688 - 3656092 + | H-NS family protein MvaT TERM 2695 3656114 - 3656130 + T 100 -13.7 -5.4833 | opp_overlap 3656114 CGCAACACCCAAAAA CGCCAGC CAT GCTGGCG TTTTTTATTGGCTCG TERM 2696 3656130 - 3656114 - T 100 -13.7 -4.74706 | opp_overlap 3656114 CGCAACACCCAAAAA CGCCAGC CAT GCTGGCG TTTTTTATTGGCTCG sbcB 3657848 - 3656403 - | exonuclease I Pmen_3315 3658025 - 3658783 + | hypothetical protein TERM 2697 3658793 - 3658814 + F 89 -17.3 -3.22521 | opp_overlap 3658784 3658785, overlap 3658789 CAATAAGCCGACGTT CCGGGCCAG TTCG CTGGCCCGG TTGCGTTCGTGTCCC TERM 2698 3659470 - 3659438 - g 74 -12.6 -3.61517 | opp_overlap 3659436 3659415 3659438 ACCCTCGGCGAACAA CGCGCCCTGCTCGG TTTCG CCGAACGCGGCGCG CAATTGTCCGCGGCG Pmen_3316 3658871 - 3659596 + | RDD domain-containing protein Pmen_3317 3659593 - 3660579 + | hypothetical protein TERM 2699 3661415 - 3661374 - g 72 -12.9 -3.12595 | gap 1, overlap 3661367 3661372 CGCAACTACCGAACA CCGCCTGGGC-CGAGCCGCA GCC TGCGGCCAGCGAGCAGGCGG ACCCACAGGGCCCGG Pmen_3318 3660566 - 3662143 + | hypothetical protein Pmen_3319 3662140 - 3663321 + | hypothetical protein Pmen_3320 3663318 - 3664361 + | ATPase TERM 2700 3664928 - 3664960 + G 70 -9.8 -3.74693 | gap 1, opp_overlap 3664898 AGCCAGCTGGGCGTA CGCCAGCGCCCACGC CGCG GCCTGGGC-CTGGAG TTTCATCAGCTGCGC TERM 2701 3665352 - 3665307 - g 72 -11.7 -3.49653 | opp_overlap 3665326 ACGACCTCGAGACAA GCCAGCAACCGGCCGACTTCA GCGC CGCGGCCGACCTGCTGCTGGC CCGTCAGCGCCGCCG Pmen_3321 3664358 - 3665689 + | hypothetical protein Pmen_3322 3665897 - 3666478 + | superoxide dismutase TERM 2702 3666493 - 3666466 - f 72 -12 -3.28712 | overlap 3666467 CTTCGTCGCCCAGAA CTACGCCGCCTG ATTC CAGGCTGCGTAA CCCGAGAACCCGGCC TERM 2703 3666492 - 3666467 - f 72 -13.3 -2.57132 | overlap 3666466 TTCGTCGCCCAGAAC TACGCCGCCTG ATTC CAGGCTGCGTA ACCCGAGAACCCGGC TERM 2704 3666502 - 3666520 + F 100 -13.1 -5.0925 | opp_overlap 3666502 TGCGTAACCCGAGAA CCCGGCC CCTGC GGCCGGG TTTTTCGTTTTCGGC TERM 2705 3666520 - 3666502 - f 76 -13.1 -3.36492 | opp_overlap 3666502 TGCGTAACCCGAGAA CCCGGCC CCTGC GGCCGGG TTTTTCGTTTTCGGC TERM 2706 3666689 - 3666668 - f 81 -4.3 -4.87893 | opp_overlap 3666668, overlap 3666670 AATGGCAATGAAAAA GTGCCAGCA ACCA TGATGGCCC TTTGACGGCTAGAGC Pmen_3323 3666691 - 3668826 + | diguanylate cyclase/phosphodiesterase TERM 2707 3668847 - 3668833 - T 74 -12.8 -3.17194 | opp_overlap 3668845 ACGCTCTGAACGCAA GCCCGC CTG GCGGGC TCGGCGCCGTAGGGT TERM 2708 3668941 - 3668922 - T 70 -3.5 -4.65263 | overlap 3668918 ACCCCGGAAAACAAA CCGTCAC CGCTGC GCGACAG CCTGCAGGGTGGAAA Pmen_3324 3669893 - 3668988 - | hypothetical protein Pmen_3325 3670467 - 3669895 - | LemA family protein TERM 2709 3670777 - 3670733 - g 77 -10 -3.96148 | gap 2 TGCGGCGACGACAAA GCTCCCGCCACTCAAGCCGCAG CTC CGGCGGC-C-AGCAGCGAGAGC ACTGCCCCGGCCGGC Pmen_3326 3670658 - 3671995 + | hypothetical protein TERM 2710 3672043 - 3672017 - T 100 -18.7 -3.61715 | opp_overlap 3672017 TAGCGGGCTGAAGAA GCCGGCGCCCC GATAA GGAGCGCCGGC TTTTTTGTGCCTCGC TERM 2711 3672017 - 3672043 + T 100 -16.5 -5.28176 | opp_overlap 3672017 TAGCGGGCTGAAGAA GCCGGCGCCCC GATAA GGAGCGCCGGC TTTTTTGTGCCTCGC Pmen_3327 3672910 - 3672071 - | AraC family transcriptional regulator Pmen_3328 3673482 - 3672913 - | GCN5-related N-acetyltransferase TERM 2712 3673584 - 3673605 + r 73 -9.3 -3.86346 | opp_overlap 3673560 3673559 CACCCTGCGACCTTG GTCGCAGCC GACA GGCCGCGGC TTTGTGCAACACTGA TERM 2713 3674363 - 3674337 - R 72 -13.7 -2.57132 | overlap 3674336 TTCGGCCTGTACAAC GGCGTGGGCGA TCTGC TCGCCCAGGCC CGGGTCACCGCCGAA TERM 2714 3676786 - 3676753 - R 72 -12.3 -3.07575 | gap 1, overlap 3676742 3676743 AAAACCCGCACCCAA GCCG-CAGGGGCCCGC CTC GCAGGCCGCAGACGGC CAGCCGCTGCACGGC Pmen_3330 3678030 - 3677212 - | MerR family transcriptional regulator Pmen_3331 3678241 - 3679263 + | alpha/beta hydrolase fold Pmen_3332 3680789 - 3679314 - | hypothetical protein Pmen_3333 3681154 - 3680843 - | Sel1 domain-containing protein TERM 2715 3681279 - 3681263 - R 72 -10.9 -3.29043 | overlap 3681250 AAGCGCTCGGCACAA TCCACAG AAG CTGTGGA TAACTCCGTGCACAA TERM 2716 3681337 - 3681310 - R 72 -13.4 -2.64155 | opp_overlap 3681301 3681336, overlap 3681307 3681306 CTTGGGCGAAAGGGA CGTGAGCCCCGA TGCT TCGGGGCTCTCA GTCAAACTGTCGATT Pmen_3334 3682272 - 3681520 - | hypothetical protein TERM 2717 3682086 - 3682114 + g 78 -14.6 -3.21912 | gap 1 TCAGCAGGTAGTGCA GCTGCTCGCTGCC CTGC GGCAGCG-GCGGC TTGCTGGCTTCGAGC TERM 2718 3682412 - 3682397 - R 76 -6.2 -4.59109 | opp_overlap 3682397 3682395 CAGAGCCGCGAAAAA CTGTAT TTTT ATACAG TATTTTGTCCCGCGG Pmen_3335 3682875 - 3682504 - | XRE family transcriptional regulator Pmen_3336 3682981 - 3685563 + | hypothetical protein Pmen_3337 3685568 - 3685759 + | hypothetical protein Pmen_3338 3685771 - 3686109 + | hypothetical protein TERM 2719 3686183 - 3686202 + T 100 -13.6 -5.00616 | opp_overlap 3686183 3686186 GCCGCAGAAACGAAA GAACCCGC CGAG GCGGGTTC TTTTTTGCGAAGGCA TERM 2720 3686202 - 3686183 - T 95 -13.6 -4.13995 | opp_overlap 3686183, overlap 3686186 GCCGCAGAAACGAAA GAACCCGC CGAG GCGGGTTC TTTTTTGCGAAGGCA TERM 2721 3686199 - 3686186 - T 79 -9.5 -4.18676 | opp_overlap 3686183, overlap 3686183 GCAGAAACGAAAGAA CCCGC CGAG GCGGG TTCTTTTTTGCGAAG Pmen_3339 3686548 - 3686222 - | glutaredoxin-like protein TERM 2722 3686630 - 3686612 - R 100 -14.6 -4.1899 | opp_overlap 3686602, overlap 3686624 CGATTGTAGCGAAAA GCCGAGCA CAA TGCTCGGC CTTGCCGTCGCTCCC Pmen_3340 3688781 - 3686673 - | molydopterin dinucleotide-binding region TERM 2723 3686919 - 3686955 + g 72 -13 -3.18912 | gap 1, overlap 3686920 CACCTGCACGCGCTG GCCGT-CGACCAGGCCA CGGC TGGCCAGGTCGGACGGA TTCATCAGTAGCTGG TERM 2724 3686920 - 3686954 + g 77 -16.5 -2.51133 | gap 1, overlap 3686919 ACCTGCACGCGCTGG CCGT-CGACCAGGCCA CGGC TGGCCAGGTCGGACGG ATTCATCAGTAGCTG TERM 2725 3688904 - 3688882 - R 90 -17.8 -3.14132 | CGTTCGTCTCATGAA TCGGCAGGCA TCA TGCCTGCCGA TTCAGGGTCGCAACG Pmen_3341 3689358 - 3688927 - | hypothetical protein TERM 2726 3690408 - 3690380 - g 72 -14.5 -2.77523 | opp_overlap 3690389, overlap 3690377 3690375 GGGCCAGGAAGACGA GGCCGCACAGCGC ATG GCGCTGTTCCGCC CCTACCAGGTGACCC Pmen_3342 3689694 - 3690614 + | ornithine carbamoyltransferase Pmen_3343 3690611 - 3691717 + | ABC transporter related Pmen_3344 3692525 - 3691719 - | PhzF family phenazine biosynthesis protein TERM 2727 3692576 - 3692596 + r 84 -11.1 -4.11216 | opp_overlap 3692549 3692575 CCTGCGCCAGGTAAG CGGCAACAG ATA CAGTTGCCG TTTTCCAGATGCCGG Pmen_3345 3694174 - 3692687 - | glycerol kinase TERM 2728 3693341 - 3693359 + g 70 -11.7 -3.37796 | overlap 3693313 GCGATTCTTCGAGCT CACCGGC TGATC GCCGGTG TTCTGGATCATGAAA Pmen_3346 3694701 - 3694231 - | ybaK/ebsC protein TERM 2729 3695045 - 3695033 - g 84 -6.9 -4.7254 | overlap 3695035 ATGCGCGAGGAAAAA CAGCG CAT CGCCG AAGCCGTGGCCGCGC Pmen_3347 3694796 - 3695554 + | DeoR family transcriptional regulator glpD 3695751 - 3697280 + | glycerol-3-phosphate dehydrogenase TERM 2730 3697297 - 3697313 + F 100 -15.1 -5.24129 | TTCTGCGTGCTCAAT GCCCCGC TCT GCGGGGC TTTTTTATGGCGCGA TERM 2731 3697425 - 3697448 + F 85 -3.2 -5.34655 | gap 1, overlap 3697431 CTTGGCACTTTGATG CGGAAT-CGAA ACA TTCGTATTCAG TTTTATTTTTACTTA Pmen_3349 3697550 - 3698020 + | bacterioferritin TERM 2732 3698074 - 3698021 - T 100 -18.3 -3.74361 | gap 1, opp_overlap 3698039, overlap 3698025 3698039 CAGATGGACGAATAA GTCAGCCGCAACAAAAAACGGGAGCC AGT GGCTCCCGTTTTTTAT-GCGCCAGGC AATCAGCGCGCCTCC TERM 2733 3698070 - 3698025 - T 95 -20.7 -2.67428 | gap 1, opp_overlap 3698039, overlap 3698021 3698039 TGGACGAATAAGTCA GCCGCAACAAAAAACGGGAGCC AGT GGCTCCCGTTTTTTAT-GCGCC AGGCAATCAGCGCGC TERM 2734 3698039 - 3698057 + T 100 -16 -5.24129 | opp_overlap 3698039 3698025 3698021 AGCCGCAACAAAAAA CGGGAGCC AGT GGCTCCCG TTTTTTATGCGCCAG TERM 2735 3698057 - 3698039 - T 100 -16 -5.45652 | opp_overlap 3698039, overlap 3698025 3698021 AGCCGCAACAAAAAA CGGGAGCC AGT GGCTCCCG TTTTTTATGCGCCAG Pmen_3350 3701151 - 3698077 - | acriflavin resistance protein TERM 2736 3700513 - 3700492 - G 70 -3.5 -4.56597 | opp_overlap 3700495, overlap 3700494 GGCGGTCTCGAAAAA GCCCGCGGC AGCC ACCGCGTTC TGCGCCTCCAGCGCC Pmen_3351 3702261 - 3701158 - | RND family efflux transporter MFP subunit TERM 2737 3702851 - 3702811 - g 71 -14.5 -2.63596 | opp_overlap 3702804 GTGCAGGGCAGATCA GGGCGGCCTGCTGCGGATC GAC GACCCGCTGATGGCCGCCG ACCAGTTCTTCAGCC Pmen_3352 3702353 - 3702988 + | TetR family transcriptional regulator Pmen_3353 3703856 - 3703050 - | hypothetical protein TERM 2738 3703969 - 3703980 + r 76 -7.2 -4.56597 | overlap 3703962 CGCCAGCCCCCAGAC GCCC GGCC GGGC TTTTTGGCCAGGCGC Pmen_3354 3704790 - 3704089 - | extensin family protein TERM 2739 3704185 - 3704218 + g 73 -13.1 -3.32343 | gap 1, opp_overlap 3704177 3704178 GTTGAAACTGTCGCA GGC-CGCCTCCTGCAC CAG GCGCAGGAAGCGCGCC TTGTCGCCCTCTCCC Pmen_3355 3705672 - 3704803 - | hypothetical protein TERM 2740 3705332 - 3705289 - G 72 -13.2 -3.14564 | gap 2 CCAGTGCTCGATGAA CGCC-GCCAGC-TCGGCCAG GCGCGT CGGGCCGAAGCTGGCCGGCA GTTGCAGCCAGTACG Pmen_3356 3706071 - 3705727 - | hypothetical protein Pmen_3357 3706868 - 3706185 - | peptidase M22, glycoprotease TERM 2741 3706914 - 3706894 - R 100 -10.4 -5.252 | CAGCTGCAGAAAAAA GAGCCGGC ATTAG ACCGGCTC GAGGAGTTTTTTTCC Pmen_3358 3707757 - 3706984 - | 5'-nucleotidase TERM 2742 3707917 - 3707888 - R 100 -22.3 -2.87931 | opp_overlap 3707895, overlap 3707895 TCCATGTTCCATATA CGACAAAGGCCCC TTGC GGGGCCTTTGTCG GAGACAGCTGGCGGT TERM 2743 3707910 - 3707895 - R 84 -11.8 -4.04318 | opp_overlap 3707895, overlap 3707888 TCCATATACGACAAA GGCCCC TTGC GGGGCC TTTGTCGGAGACAGC TERM 2744 3707895 - 3707910 + r 82 -11.8 -3.85698 | opp_overlap 3707895 3707888 TCCATATACGACAAA GGCCCC TTGC GGGGCC TTTGTCGGAGACAGC adk 3708584 - 3707937 - | adenylate kinase TERM 2745 3708805 - 3708758 - R 72 -12.4 -3.02511 | overlap 3708736 CCGACCCGGTGAACA GGCTCGGCGAGGCCGGCCTGGC ACAC GCCTTGCCGGCCTCTGCGCCCC TCAACCGGTGTTGCG Pmen_3360 3711442 - 3708806 - | phosphoenolpyruvate carboxylase TERM 2746 3710325 - 3710284 - G 72 -12.9 -3.17527 | gap 1, overlap 3710282 3710285 GACGCACCAGGAACA GGCCGAAGGTCG-CTGCCCG GCG CAGGCAGTCGAGCAGCGGCC CATCGGCGATCACGC Pmen_3361 3711613 - 3711957 + | hypothetical protein Pmen_3362 3712390 - 3712803 + | hypothetical protein TERM 2747 3713185 - 3713161 - g 77 -12.1 -3.66732 | overlap 3713163 GAACGAGCTGAAGAA CACCTCGGCGC AAC GCGCCAAGGCA CTGCTCGATGCCCGC TERM 2748 3713183 - 3713163 - g 80 -14.7 -3.40878 | overlap 3713161 ACGAGCTGAAGAACA CCTCGGCGC AAC GCGCCAAGG CACTGCTCGATGCCC Pmen_3363 3712850 - 3713635 + | OmpA/MotB domain-containing protein TERM 2749 3713654 - 3713677 + T 100 -16.8 -5.08824 | opp_overlap 3713654 3713658 CAGCGCTGCAATGAA GAAACCCGCC TGAT GGCGGGTTTC TTTTTTAGGTGCGCA TERM 2750 3713677 - 3713654 - T 93 -16.8 -3.34013 | opp_overlap 3713654, overlap 3713658 CAGCGCTGCAATGAA GAAACCCGCC TGAT GGCGGGTTTC TTTTTTAGGTGCGCA TERM 2751 3713673 - 3713658 - T 93 -11.8 -4.3255 | opp_overlap 3713654, overlap 3713654 GCTGCAATGAAGAAA CCCGCC TGAT GGCGGG TTTCTTTTTTAGGTG Pmen_3364 3714034 - 3713711 - | hypothetical protein TERM 2752 3713741 - 3713758 + g 77 -6.9 -4.51812 | overlap 3713722 CGGCGTTTCCTGACC CAGGCAG CGCA CGGCCTG TTTCTTGTTGTCCAC Pmen_3365 3714924 - 3714031 - | alpha/beta fold family hydrolase-like protein Pmen_3366 3715660 - 3714914 - | hypothetical protein Pmen_3367 3717030 - 3715741 - | hypothetical protein Pmen_3368 3717590 - 3717039 - | hypothetical protein Pmen_3369 3718347 - 3717634 - | TetR family transcriptional regulator TERM 2753 3718502 - 3718487 - R 100 -11.8 -4.7497 | opp_overlap 3718482 3718487 CCCAGTCAGCAAAAA GCCGCC CGAG GGCGGC TTTTCTGTCTGGCAT TERM 2754 3718487 - 3718502 + r 95 -11.8 -4.61199 | opp_overlap 3718487, overlap 3718482 CCCAGTCAGCAAAAA GCCGCC CGAG GGCGGC TTTTCTGTCTGGCAT lysS 3720034 - 3718517 - | lysyl-tRNA synthetase TERM 2755 3719926 - 3719969 + g 72 -4.6 -4.46587 | opp_overlap 3719905 3719920, overlap 3719959 GGAAGGCAATGCCCT GCTCA-CGCACGGCGGCAAG CTTTTC CTTGC-GCTGGGCGATCAGC TTGTTTTCTTCGTGC Pmen_3371 3721242 - 3720106 - | peptide chain release factor 2 Pmen_3372 3722315 - 3721380 - | autotransporter beta-domain-containing protein Pmen_3373 3724056 - 3722395 - | glucose-methanol-choline oxidoreductase TERM 2756 3723820 - 3723782 - G 70 -10.3 -3.67597 | gap 1, opp_overlap 3723795, overlap 3723784 CCGTTGATCGAAGAA CAGCCGCCGAGCACCCGC CCAC GCGGGTACTTGA-GGCTA CGCCCGTGCAGGCCG TERM 2757 3724189 - 3724199 + H 71 -8.2 -4.0251 | overlap 3724188 TATGGTGAAGCACCC GCGC TCT GCGC TTTACTTGTAGTCAT TERM 2758 3725175 - 3725195 + G 73 -9.7 -3.95674 | overlap 3725170 ATGGTCGGCCTGGGC GCAGCCAAT CTG ATTGGCGGC TTCTTTCAGGGTTTT Pmen_3374 3724236 - 3726023 + | sulfate transporter Pmen_3375 3726757 - 3726032 - | hypothetical protein TERM 2759 3726680 - 3726698 + g 72 -7.3 -4.1899 | opp_overlap 3726649, overlap 3726676 GGCCTGCTGCCCCTG GCCAGCC TTGCC GGCAGGC TTTTGCATGGCCTGC Pmen_3376 3728632 - 3726923 - | exonuclease RecJ TERM 2760 3728647 - 3728674 + r 100 -22.8 -3.05384 | TGGGTATTCCGTATG GCGCTGCGCGTC AGCC GACGCGCAGCGC TTGAGTCAAAGCGAG Pmen_3377 3729324 - 3728680 - | putative transcriptional regulator TERM 2761 3728835 - 3728845 + g 76 -8.2 -4.21194 | overlap 3728818 CGTACTCCTGGCACA GGGC ACG GCCC TTTTCGGTAGTGCGG TERM 2762 3730124 - 3730106 - g 73 -13.1 -3.31144 | CGTGCACGGCGACAA CGCCGCC TCGGT GGCGGCG GTGCAGCGTATCCGC Pmen_3378 3729417 - 3730166 + | hypothetical protein Pmen_3379 3730163 - 3730867 + | allophanate hydrolase subunit 1 Pmen_3380 3730864 - 3731778 + | urea amidolyase related protein TERM 2763 3731819 - 3731793 - f 100 -8.7 -4.88067 | gap 1, overlap 3731795 3731796 ATTCACCGAGAAAAA CAT-CCGGCCCG ACGA CGGGCCGGCACA ACAACGACAAGAAAC TERM 2764 3731816 - 3731795 - f 89 -12.9 -4.06182 | overlap 3731793 3731796 TCACCGAGAAAAACA TCCGGCCCG ACGA CGGGCCGGC ACAACAACGACAAGA TERM 2765 3731815 - 3731796 - f 83 -16.4 -3.02986 | overlap 3731795 3731793 CACCGAGAAAAACAT CCGGCCCG ACGA CGGGCCGG CACAACAACGACAAG Pmen_3381 3731910 - 3733136 + | manganese transporter NRAMP Pmen_3382 3733700 - 3733158 - | YaeQ family protein Pmen_3383 3736472 - 3733761 - | superfamily I DNA/RNA helicase Pmen_3384 3737161 - 3736472 - | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein Pmen_3385 3737726 - 3737175 - | rhomboid family protein Pmen_3386 3742957 - 3737723 - | hypothetical protein TERM 2766 3742525 - 3742485 - G 72 -12 -3.57144 | gap 2, opp_overlap 3742485 3742483, overlap 3742486 TCGCCGATCTGGAAA CTCGCCAGCAGCTTGCCATC GCG GATGGCCAGCTGC-AGC-AG ACGGGTGTTCTTGTA Pmen_3387 3745179 - 3743134 - | hypothetical protein Pmen_3388 3745912 - 3745271 - | hypothetical protein TERM 2767 3745940 - 3745957 + r 75 -14.1 -2.91695 | opp_overlap 3745940, overlap 3745937 CCTAGGTTAGGGAAA CGGGGCG CCAG CGCCCCG TCGTTTACGCATCGC TERM 2768 3745957 - 3745940 - R 88 -14.1 -3.65902 | opp_overlap 3745940 3745937 CCTAGGTTAGGGAAA CGGGGCG CCAG CGCCCCG TCGTTTACGCATCGC Pmen_3389 3746668 - 3745973 - | phage shock protein A, PspA Pmen_3390 3747302 - 3746682 - | hypothetical protein Pmen_3391 3747638 - 3748837 + | L-carnitine dehydratase/bile acid-inducible protein F Pmen_3392 3748839 - 3749090 + | hypothetical protein TERM 2769 3749118 - 3749098 - T 100 -15.4 -4.05788 | opp_overlap 3749098 GCCGCTGAAACGAAA CCGGCGCC ACAAG GGCGCCGG TTTGCATTCGCAGGC TERM 2770 3749098 - 3749118 + T 95 -15.4 -3.75153 | opp_overlap 3749098 GCCGCTGAAACGAAA CCGGCGCC ACAAG GGCGCCGG TTTGCATTCGCAGGC Pmen_3393 3750549 - 3749140 - | threonine synthase Pmen_3394 3751911 - 3750607 - | homoserine dehydrogenase TERM 2771 3751962 - 3751941 - R 93 -15.1 -3.75169 | CAGCACTGCACGAAA CGGCCGGAG CATG CCCCGGCCG CGGATAAAGAGCCGC TERM 2772 3752113 - 3752065 - R 78 -4.7 -4.75174 | opp_overlap 3752065 TATGCAAGGCAAAAA CAGGCGAGGAA-GCGCAGTTTAC GAGTT GTAAA-TGAGCATTCCGAGCCTG TTTTTAACGCAGCAG TERM 2773 3752065 - 3752113 + r 74 -5.4 -4.56597 | opp_overlap 3752065 TATGCAAGGCAAAAA CAGGCGAGGAA-GCGCAGTTTACG AGT TGTAAA-TGAGCATTCCGAGCCTG TTTTTAACGCAGCAG Pmen_3395 3752885 - 3752160 - | protein-disulfide isomerase-like protein xerD 3753873 - 3752977 - | site-specific tyrosine recombinase XerD Pmen_3397 3754091 - 3754771 + | hypothetical protein TERM 2774 3754836 - 3754821 - T 100 -6.8 -5.65177 | opp_overlap 3754821 ACAGGCATAAAAAAA GCAGCC CGTA AGCTGC TTTTTTGCGAGAAGC TERM 2775 3754821 - 3754836 + T 84 -6.1 -5.00616 | opp_overlap 3754821 ACAGGCATAAAAAAA GCAGC CCGTAA GCTGC TTTTTTGCGAGAAGC rplS 3755210 - 3754860 - | 50S ribosomal protein L19 trmD 3755996 - 3755253 - | tRNA (guanine-N(1)-)-methyltransferase rimM 3756538 - 3756002 - | 16S rRNA-processing protein rpsP 3756799 - 3756548 - | 30S ribosomal protein S16 TERM 2776 3756862 - 3756849 - R 74 -3.7 -4.84527 | overlap 3756850 3756851 GGCACACATTAAAAA TGGGC CTAG GCCCG AAAGGCCGCATATTT Pmen_3402 3758318 - 3756942 - | signal recognition particle subunit FFH/SRP54 (srp54) Pmen_3403 3758476 - 3759276 + | cytochrome c assembly protein Pmen_3404 3759287 - 3760573 + | hypothetical protein Pmen_3405 3761279 - 3760545 - | lysophospholipase L1 and related esterase-like protein purT 3762457 - 3761276 - | phosphoribosylglycinamide formyltransferase 2 Pmen_3407 3762679 - 3762479 - | hypothetical protein Pmen_3408 3763196 - 3762672 - | carbonic anhydrase Pmen_3409 3763813 - 3763208 - | NUDIX hydrolase TERM 2777 3764243 - 3764194 - g 85 -15.5 -3.66666 | gap 1, overlap 3764186 TGGAAAACGGCGAAA CCGTCGAGCAGGCCGCCGCCCGCG AAA CCCTGGAGGAGGCCTGCGCG-CGG GTACGCGATCTCAGC Pmen_3410 3763965 - 3764519 + | NUDIX hydrolase Pmen_3411 3764541 - 3765044 + | hypothetical protein TERM 2778 3765076 - 3765062 - T 100 -12.8 -4.65895 | opp_overlap 3765062 CGCCGCATCGAAAAA GGCGCC GAG GGCGCC TTTTTCATATCGATT TERM 2779 3765062 - 3765076 + T 100 -12.8 -4.82154 | opp_overlap 3765062 CGCCGCATCGAAAAA GGCGCC GAG GGCGCC TTTTTCATATCGATT Pmen_3412 3765408 - 3765091 - | hypothetical protein TERM 2780 3765343 - 3765355 + g 78 -6.2 -4.57569 | opp_overlap 3765323, overlap 3765341 GCGGCCACCACCTGC GGCG AAAAC CGCC TTTTTCACCGGCTCC Pmen_3413 3765833 - 3765564 - | hypothetical protein TERM 2781 3766200 - 3766216 + r 71 -9.3 -3.71848 | opp_overlap 3766201, overlap 3766201 GAGAGGGTCATCAGA AGGCCGC TAC GCGGCCG TTGTTAATCCACCCA TERM 2782 3766215 - 3766201 - R 76 -12.8 -3.41229 | opp_overlap 3766200 3766201 AGAGGGTCATCAGAA GGCCGC TAC GCGGCC GTTGTTAATCCACCC Pmen_3414 3770116 - 3766220 - | phosphoribosylformylglycinamidine synthase TERM 2783 3767620 - 3767654 + g 73 -12.8 -3.35798 | overlap 3767653 TGCGGTTCTGGCCGC GGCCGAGGTCGATCAG GAT CAGATCGGTCTCGCCC TTGTCCATGCGCAGT TERM 2784 3768262 - 3768298 + g 70 -11.3 -3.53012 | opp_overlap 3768252 AGTCATCGCCCTGCT CCGCCTCGCGAGCCACG CTG CGGTGCATGCGCGGCGG TTTGCCCAGCAGCAC TERM 2785 3770184 - 3770200 + H 73 -10.1 -3.57144 | opp_overlap 3770172 AAAGCCGCGTCTGCG GCACCTG TGC CGGGTGC TTTCGAGATGGGCGA Pmen_3415 3770282 - 3771748 + | lytic transglycosylase, catalytic Pmen_3416 3772218 - 3771751 - | hypothetical protein Pmen_3417 3772715 - 3772239 - | CMP/dCMP deaminase, zinc-binding Pmen_3418 3774139 - 3772769 - | multicopper oxidase, type 3 Pmen_3419 3774319 - 3774789 + | hypothetical protein TERM 2786 3774937 - 3774904 - g 79 -2.2 -5.00616 | opp_overlap 3774890 3774889, overlap 3774879 3774906 TGCTCTGGGAAAAAA TCCGCAGAGCCTTG CTGCGT CCAGGCACGGCGCA AATCACATCCTATGA Pmen_3420 3774792 - 3775307 + | hypothetical protein Pmen_3421 3775995 - 3775369 - | hypothetical protein TERM 2787 3776111 - 3776082 - H 100 -15.8 -5.08169 | opp_overlap 3776087, overlap 3776087 ACATACCCCAAAAAA CAAAACCCCGGC AGCATG GCCGGGGTTTCG TCACACGAGCTAGGC TERM 2788 3776106 - 3776087 - H 100 -12.1 -5.42198 | opp_overlap 3776087, overlap 3776082 CCCCAAAAAACAAAA CCCCGGC AGCATG GCCGGGG TTTCGTCACACGAGC TERM 2789 3776087 - 3776106 + H 85 -12.1 -3.72576 | opp_overlap 3776082 3776087 CCCCAAAAAACAAAA CCCCGGC AGCATG GCCGGGG TTTCGTCACACGAGC Pmen_3422 3776776 - 3777084 + | hypothetical protein Pmen_3423 3777062 - 3777343 + | hypothetical protein TERM 2790 3778034 - 3778068 + G 78 -14.3 -3.59979 | gap 1 CCGAATTCCGAGTGC GCCGGCGGACC-TGGC TAGT GCCAAGGTGCGCTGGC TTTCCGCTGGCGAAC TERM 2791 3778555 - 3778541 - g 80 -9.2 -4.25104 | opp_overlap 3778540 3778541 CCGCCGCTATCAAAA GGCGCC GCC GGCACC GTTGTCTTACGGCTA Pmen_3424 3777612 - 3780098 + | hypothetical protein TERM 2792 3780518 - 3780501 - gf 72 -6.9 -4.16943 | TTGCACAGGCCAAAA CGGAAGC TAAA GCGTCCG GCAAAGACAGTGAGG Pmen_3425 3780095 - 3781390 + | hypothetical protein TERM 2793 3781607 - 3781597 - g 72 -8.2 -4.1523 | opp_overlap 3781596 3781593 TGCAGGACACAGAAA CGCC AGG GGCG GTGCTTTACATCAGC Pmen_3426 3781365 - 3783581 + | DEAD/DEAH box helicase domain-containing protein TERM 2794 3783686 - 3783669 - f 70 -10.5 -3.53012 | opp_overlap 3783639 TGCGGCCTGTGGAAA CCGGCCG AAAC CGGCCAG GAGCAGTCTTTGGCT Pmen_3427 3783970 - 3784470 + | hypothetical protein Pmen_3428 3784524 - 3784871 + | hypothetical protein TERM 2795 3785615 - 3785604 - g 87 -7.2 -5.06414 | opp_overlap 3785603 3785604 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 2796 3785959 - 3785943 - g 79 -2.9 -5.08601 | opp_overlap 3785944, overlap 3785944 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_3429 3785026 - 3786327 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Pmen_3430 3787217 - 3786564 - | hypothetical protein TERM 2797 3787413 - 3787426 + r 78 -6.7 -4.67982 | opp_overlap 3787410, overlap 3787410 CAATAGATAATAGGT GAAGC TCCT GCTTC TTTTGTTGCATGCAC Pmen_3431 3789169 - 3787388 - | hypothetical protein TERM 2798 3787923 - 3787933 + g 83 -4 -5.14563 | opp_overlap 3787923 ATTCCGAAAACGGAA TTTG CGT CAAA TTTTTTCCTGGCGGG TERM 2799 3788569 - 3788595 + g 72 -6.7 -4.27584 | GCTCGGAGGACTCCA CTA-CTCGGCCAC TTT GTG-CCGAGATAG TTTTAACTTGCCCAT TERM 2800 3788683 - 3788665 - G 73 -9.6 -3.90588 | CAGCGTGTAAGGAAA GCAGACCT TTC AGATCTGC TGCCTCGTAAGCCTT TERM 2801 3788732 - 3788742 + g 79 -2.4 -5.03314 | CGAAACAGTCATGTT CCGC ATC GCGA TTTTTTGAAACTCAG TERM 2802 3790099 - 3790126 + H 100 -13.4 -4.57837 | opp_overlap 3790097, overlap 3790102 AATCGCTAACCCAGC GGAGGCACCGGG GCGA CCCGGTGCCTTG TTTTTACGCCCCTGT TERM 2803 3790102 - 3790123 + H 100 -17.3 -4.40561 | opp_overlap 3790097, overlap 3790099 CGCTAACCCAGCGGA GGCACCGGG GCGA CCCGGTGCC TTGTTTTTACGCCCC TERM 2804 3790397 - 3790344 - H 77 -11.7 -3.66999 | opp_overlap 3790322 3790338 3790345, overlap 3790376 ACGGATTTACTGAAA TCCGCCGATGCGGTTTTCCGGTTTT GCAG AAAGCCGTAGAACCGCACCTTCGGA GACTGCAGCCACTCA TERM 2805 3790345 - 3790356 + H 71 -7.2 -4.28049 | opp_overlap 3790344, overlap 3790322 3790338 CGGATTTACTGAAAT CCGC CGAT GCGG TTTTCCGGTTTTGCA Pmen_3433 3791083 - 3791721 + | cobyrinic acid a,c-diamide synthase Pmen_3434 3791718 - 3791930 + | hypothetical protein TERM 2806 3792914 - 3792881 - T 100 -13.2 -4.21811 | gap 1, opp_overlap 3792881, overlap 3792884 GAGTCAATAGATAAA GCACAAGGCACCGGG GTTAA CCCAGTGCCTCG-GC TCTGTGAGTAGCATC TERM 2807 3792912 - 3792884 - T 80 -14.6 -3.11303 | opp_overlap 3792881, overlap 3792881 TCAATAGATAAAGCA CAAGGCACCGGG GTTAA CCCAGTGCCTCG GCTCTGTGAGTAGCA Pmen_3436 3794508 - 3792928 - | choline/carnitine/betaine transporter Pmen_3437 3794874 - 3795464 + | hypothetical protein Pmen_3438 3795493 - 3796326 + | 3-oxoadipate enol-lactonase Pmen_3439 3796323 - 3797804 + | aldehyde dehydrogenase (acceptor) Pmen_3440 3797817 - 3798302 + | flavin reductase domain-containing protein Pmen_3441 3798530 - 3799969 + | succinate semialdehyde dehydrogenase Pmen_3442 3799988 - 3800371 + | 4-carboxymuconolactone decarboxylase TERM 2808 3800384 - 3800417 + F 91 -8.1 -4.84359 | opp_overlap 3800394, overlap 3800387 3800388 TAGGGCCGGTGAAAC TGTTGAAGGAGCGCC CTCG GGTGCTCCTTCGTTG TTTTTCTACGGATAG TERM 2809 3800387 - 3800414 + F 100 -14.2 -4.52873 | opp_overlap 3800394, overlap 3800384 3800388 GGCCGGTGAAACTGT TGAAGGAGCGCC CTCG GGTGCTCCTTCG TTGTTTTTCTACGGA TERM 2810 3800388 - 3800413 + F 89 -15.5 -3.31001 | opp_overlap 3800394, overlap 3800387 3800384 GCCGGTGAAACTGTT GAAGGAGCGCC CTCG GGTGCTCCTTC GTTGTTTTTCTACGG Pmen_3443 3800404 - 3801204 + | GntR family transcriptional regulator TERM 2811 3801455 - 3801442 - g 70 -5.9 -4.18018 | CGGCTTCATGGAAAA CGGCG AAAC CACCG AACAGGCCGCCCTGC Pmen_3444 3801209 - 3801772 + | NUDIX hydrolase Pmen_3445 3802240 - 3801908 - | hypothetical protein Pmen_3446 3802276 - 3803385 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 2812 3803443 - 3803456 + F 70 -3.8 -4.67478 | overlap 3803448 CAGCCTCGCCAGATC GTGC TCAGGC GCAC TTGTTTTTCTATTTC TERM 2813 3803448 - 3803459 + F 83 -2.2 -5.19879 | overlap 3803443 TCGCCAGATCGTGCT CAGG CGCA CTTG TTTTTCTATTTCAAA TERM 2814 3803719 - 3803699 - f 76 -8.9 -4.07687 | opp_overlap 3803699 ACTGCTCCCTGAAAA GCGGGCATC GCA AAAGCCCGC TTGCGTACAAACACA TERM 2815 3803819 - 3803769 - g 75 -4.5 -4.63218 | overlap 3803771 3803809 TGGTGTTCAAGAAAA CAGCTACCGCGGTAATCGCCACC GCACT GATGGCCATAACCGCAGGCACGG CCACCGCAGCCGATA Pmen_3447 3803753 - 3804778 + | extracellular solute-binding protein TERM 2816 3804827 - 3804776 - g 74 -12.2 -3.53224 | gap 1, overlap 3804780 3804783 GAGTGGCTGCTGAAA TGAAGATCGCCGCCGTGCAGTTGAC CCA GTCACCCGC-CGGCGGCACTCCCCG CTCGGCGCGCCTGGC TERM 2817 3804823 - 3804780 - g 83 -16 -3.51232 | gap 1, overlap 3804776 3804783 GGCTGCTGAAATGAA GATCGCCGCCGTGCAGTTGAC CCA GTCACCCGC-CGGCGGCACTC CCCGCTCGGCGCGCC TERM 2818 3804820 - 3804783 - g 77 -16.3 -2.59569 | gap 1, overlap 3804780 3804776 TGCTGAAATGAAGAT CGCCGCCGTGCAGTTGAC CCA GTCACCCGC-CGGCGGCA CTCCCCGCTCGGCGC TERM 2819 3805370 - 3805392 + G 79 -13.4 -3.65201 | AGGCCGGCTCGATCT GTGGCGCCAG CCC CTGGCGCAAC TTCTTCCGGGTGTTC Pmen_3448 3804775 - 3805671 + | binding-protein-dependent transport systems inner membrane component Pmen_3449 3805675 - 3806484 + | binding-protein-dependent transport systems inner membrane component Pmen_3450 3806502 - 3807656 + | ABC transporter related TERM 2820 3807674 - 3807700 + F 100 -25.2 -4.92385 | CAAACTCCCCCTTTG CCCCCGCCCTGC TGC GCAGGGCGGGGG TTTTCTTTGCCTGTC Pmen_3451 3807947 - 3808432 + | flavin reductase domain-containing protein TERM 2821 3808458 - 3808475 + T 100 -9.8 -4.83169 | TTGTGTGCTTGTCTT GCCCCC TTAGCC GGGGGC TTTTTATGACCAGCT Pmen_3452 3809304 - 3808639 - | putative PAS/PAC sensor protein Pmen_3453 3809497 - 3810024 + | hypothetical protein Pmen_3454 3810021 - 3810950 + | ferredoxin Pmen_3455 3810967 - 3811983 + | hypothetical protein Pmen_3456 3812011 - 3813141 + | glycine cleavage T protein (aminomethyl transferase) TERM 2822 3813145 - 3813123 - f 80 -10.4 -4.02817 | CCCCGAGAAGAAGAA GCGCACCGCC AAG GGCTGAGCGC ACGACCTTGCCTGCA Pmen_3457 3813175 - 3814029 + | formyltetrahydrofolate deformylase Pmen_3458 3814026 - 3814937 + | methenyltetrahydrofolate cyclohydrolase TERM 2823 3816051 - 3816015 - g 77 -7.2 -4.48713 | GTCAGGAAGAAGAAA CCCTGGAAACCGCCCA GCAGA TGTTCGAGTTCCAGGG CGAGTACATCCGCCA Pmen_3459 3814934 - 3816304 + | flavin-containing monooxygenase TERM 2824 3816898 - 3816845 - g 82 -16.8 -2.87344 | CACCCGGCGGACAGA CGCCGGTGGACCAGCAGACGC-GCGC CAGC GAGCTGCGCCTGCTGATCCAACG-CG CCAACCCGTCCAGCC Pmen_3460 3816415 - 3818760 + | glycine cleavage T protein (aminomethyl transferase) TERM 2825 3818961 - 3819004 + F 81 -16 -2.84602 | overlap 3818961 TAGGGAAGCCGCCAT CTGTAGGAGCGGGCTCTGCT TGCG AGCAGGGCTCGCCCCTACGC GTTTCATCCCATAGC TERM 2826 3818961 - 3819005 + F 95 -15.8 -3.74693 | gap 1, overlap 3818961 TAGGGAAGCCGCCAT C-TGTAGGAGCGGGCTCTGCT TGCG AGCAGGGCTCGCCCCTACGCG TTTCATCCCATAGCC Pmen_3461 3819036 - 3820022 + | methyl-accepting chemotaxis sensory transducer TERM 2827 3820301 - 3820287 - g 79 -7.8 -4.55023 | TGGAAGAGCAGAAAA CCCCCA CTC TGGAGG AGCTGCAGGCTCTGA Pmen_3462 3820271 - 3821644 + | Rh family protein/ammonium transporter Pmen_3463 3821700 - 3821879 + | hypothetical protein TERM 2828 3821888 - 3821907 + T 93 -15 -3.78775 | CAAGTAAGCACTCCG GCCGGCAG TCCG CTGCCGGC TTTCCTCCTCCCCGC TERM 2829 3822100 - 3822070 - T 79 -14.8 -2.91264 | opp_overlap 3822073 3822075 CCGTTCACCCACACA GCACAGCCTGGC GACTCAA GCCAGACTGTGC TCTACCAGCACGGAG TERM 2830 3822239 - 3822194 - T 95 -19.1 -3.30441 | gap 1, opp_overlap 3822201 3822202, overlap 3822203 CATTACCGTCCACAA GCGCAGAA-ACGCCGCGAGTCC GGA GAACCCGCGGCGCCTTGTGCGC AAGACCGGGCCGGAT TERM 2831 3822229 - 3822203 - T 100 -18 -3.9398 | opp_overlap 3822202 3822201, overlap 3822194 CCACAAGCGCAGAAA CGCCGCGAGTCC GGA GAACCCGCGGCG CCTTGTGCGCAAGAC Pmen_3464 3822608 - 3822258 - | small multidrug resistance protein TERM 2832 3822660 - 3822633 - R 100 -18.4 -3.89215 | CCGCAGAAATGCAAA CGCCCCGAACGC TGAC GCGCCCGGGGCG AGCAAAGACCTCAGA Pmen_3465 3823993 - 3822671 - | glutamate synthase (NADPH) GltB2 subunit TERM 2833 3823299 - 3823318 + g 70 -2.1 -4.60041 | TAGGGGCGGCTGGCA CCGATCT TCACGT AGATGGG TTTTTCCCAGTCGGT Pmen_3466 3824785 - 3824111 - | glutamate synthase (NADPH) GltB3 subunit Pmen_3467 3825696 - 3824797 - | glutamate synthase (NADPH) GltB1 subunit TERM 2834 3825640 - 3825664 + g 77 -12.2 -3.65046 | gap 1, opp_overlap 3825636, overlap 3825640 GGGTTCGAACAGTTT G-CCGAGCTGG CCTT CCAGCTCGGGC TTCTTCAGGTAAAGA Pmen_3468 3827070 - 3825736 - | L-glutamine synthetase Pmen_3469 3827427 - 3828020 + | XRE family transcriptional regulator TERM 2835 3828108 - 3828124 + F 72 -13.7 -2.59881 | overlap 3828107 CCCGCCACGCCGTAG GGTGCGC CGC GCGCACC GTTCTGCACTCCATC TERM 2836 3828750 - 3828719 - g 77 -16.6 -2.71144 | gap 1, opp_overlap 3828712 CATCGTCTCCAACCA CCTCGAGCTGCGGCC CAT GGCCG-AGCGCGAGG GCATCCGCTTCATCT Pmen_3470 3828336 - 3829202 + | formyltetrahydrofolate deformylase TERM 2837 3830083 - 3830038 - g 84 -6.7 -4.7373 | gap 1, overlap 3830041 CTACCTGATGAAAAA CACCCTGGTCGCGGCGCGCCTG CAA CAGACG-GCCCCGTCCAACCTG ACCCAGCGCGCGGAG Pmen_3471 3829199 - 3830122 + | methenyltetrahydrofolate cyclohydrolase Pmen_3472 3830104 - 3831345 + | FAD dependent oxidoreductase Pmen_3473 3831357 - 3831659 + | sarcosine oxidase, delta subunit, heterotetrameric TERM 2838 3832720 - 3832705 - g 78 -10.4 -4.07568 | GGTCGCCGTGGAAAA GCAGGG CATC CCCTGC CACCTGGGCAGCACC TERM 2839 3833666 - 3833653 - g 81 -8.1 -4.65895 | CCTGCCATTCAAAAA GCAGC CGCT GCTGC GCACTCGCTATGCGT TERM 2840 3833952 - 3834003 + G 71 -9.3 -3.76402 | gap 1 GCTTCCCCTATCTGG CCG-CACGCACCGGCAGCGTCG CCGGCATAC CGGCGCGGCTGATGCGGGTCGG TTTCGTCGGTGAGCT TERM 2841 3834447 - 3834414 - g 77 -16.7 -2.62184 | CCCTCGGCCAGATCA TCGGCCTGGCCTACG CCGG CGCCGACCAGGCCGA GCCAGGCATGCGGAT Pmen_3474 3831656 - 3834553 + | aminomethyltransferase Pmen_3475 3834557 - 3835135 + | hypothetical protein TERM 2842 3836087 - 3836059 - g 77 -16.1 -2.52464 | opp_overlap 3836046 GCTCGCGGCAAGCCA CGATGTGTCGCAG GCA CTGGGACACATCG CCGCGTGATCATGCC Pmen_3476 3835310 - 3836095 + | IclR family transcriptional regulator TERM 2843 3836844 - 3836820 - f 95 -20.1 -3.07113 | GACCATTTCATGGAA GGCGGTGGACA CCA TGTCCACCGCC TCGCGCTGGCGAGAA Pmen_3478 3838257 - 3839300 + | luciferase family protein TERM 2844 3839312 - 3839339 + F 100 -17 -3.53012 | opp_overlap 3839313, overlap 3839313 CTAATCGATGCAGCA AGCGGCCGGATC GGGC GATCCGGCCGCC TTTCACCAACCCACA TERM 2845 3839313 - 3839338 + F 95 -20.5 -2.71712 | opp_overlap 3839313, overlap 3839312 TAATCGATGCAGCAA GCGGCCGGATC GGGC GATCCGGCCGC CTTTCACCAACCCAC TERM 2846 3839338 - 3839313 - f 95 -20.5 -3.19389 | opp_overlap 3839313 3839312 TAATCGATGCAGCAA GCGGCCGGATC GGGC GATCCGGCCGC CTTTCACCAACCCAC Pmen_3479 3839625 - 3840338 + | isochorismatase hydrolase TERM 2847 3840652 - 3840667 + F 72 -2.5 -4.7254 | GCTGCTGTTCGTGAT GCTCA TTTACC TGGGC TTTTTCGTCAGCAAT TERM 2848 3842510 - 3842492 - g 91 -13.1 -4.19817 | TTTACCTACGGAAAA CCCGCCC TGTCC GGGCGGG CTCAAGCCAAGCATG Pmen_3481 3842143 - 3842526 + | phage transcriptional regulator, AlpA Pmen_3482 3843065 - 3842541 - | phage transcriptional regulator, AlpA Pmen_3483 3843345 - 3843070 - | hypothetical protein TERM 2849 3843372 - 3843399 + r 70 -12.8 -2.94032 | overlap 3843372 AGTATTCGCATGACC GGCAAGGTTGTC AACT GACAACCTTGCA CTTTCCTTAAACCGT TERM 2850 3843372 - 3843400 + r 86 -12.6 -3.90588 | gap 1, overlap 3843372 AGTATTCGCATGACC G-GCAAGGTTGTC AACT GACAACCTTGCAC TTTCCTTAAACCGTG Pmen_3484 3844662 - 3843406 - | phage integrase family protein TERM 2851 3844585 - 3844555 - G 75 -11.9 -3.65351 | overlap 3844556 GTAGTCGTAGCGAAA GGTGACGGTACCG GTAGG CGATACCGTCACG TACATACCATCGCGG TERM 2852 3844584 - 3844556 - G 75 -15.4 -2.78996 | overlap 3844555 TAGTCGTAGCGAAAG GTGACGGTACCG GTAGG CGATACCGTCAC GTACATACCATCGCG guaA 3846541 - 3844964 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2853 3846573 - 3846594 + r 85 -13 -3.75105 | opp_overlap 3846568 3846573 TATTCACAAATGACA CGGGGCTG ATCGAA CAGCCCCG TTATTCATACATTGC TERM 2854 3846594 - 3846573 - R 72 -13 -3.06711 | opp_overlap 3846573, overlap 3846568 TATTCACAAATGACA CGGGGCTG ATCGAA CAGCCCCG TTATTCATACATTGC Pmen_3486 3848219 - 3846750 - | inositol-5-monophosphate dehydrogenase Pmen_3487 3848984 - 3848430 - | hypothetical protein TERM 2855 3848506 - 3848469 - G 77 -13.5 -3.59979 | gap 1, overlap 3848499 CTGCCTCAGCGCAAA GCCCAGACGTTCGCCGAA CTC CTCGACGAACGCC-GGAC GCAGGCCGGCATCCA TERM 2856 3849035 - 3849010 - R 70 -4.6 -4.55295 | overlap 3849012 GGGCTGACAAAGAAA GAGCGGCAGC TTAGGC GCTAGCGCCC GCAAATCAAGCCCCT Pmen_3488 3849508 - 3849041 - | transmembrane pair domain-containing protein Pmen_3489 3849597 - 3850472 + | LysR family transcriptional regulator TERM 2857 3850905 - 3850894 - g 76 -2.2 -4.8622 | opp_overlap 3850896 GCGCTGAAGGAAAAA CTCG GCGC CGAA GGGCTGTTCTCCACC TERM 2858 3851221 - 3851189 - g 87 -14.7 -3.84246 | GCTTCAACGAGGAAA GCGTGGCGCGCGCCG TGG CGGCCTGCGTCACGC CCATCGTCAGCGCCG xseA 3850465 - 3851895 + | exodeoxyribonuclease VII large subunit Pmen_3491 3851902 - 3852744 + | peptidase M23B Pmen_3492 3853029 - 3854699 + | 2-isopropylmalate synthase TERM 2859 3854745 - 3854716 - T 89 -12.9 -4.13767 | gap 1, opp_overlap 3854722, overlap 3854722 CCGCCGAGGCTAAAA CGACAACGCCGGGC ATT GCCCGGCGTTTT-G CTATGCGTAGCCCGG TERM 2860 3854722 - 3854740 + T 100 -17.4 -4.3586 | opp_overlap 3854716 3854722 AGGCTAAAACGACAA CGCCGGGC ATT GCCCGGCG TTTTGCTATGCGTAG TERM 2861 3854740 - 3854722 - T 100 -17.4 -3.68761 | opp_overlap 3854722, overlap 3854716 AGGCTAAAACGACAA CGCCGGGC ATT GCCCGGCG TTTTGCTATGCGTAG Pmen_3493 3855399 - 3854938 - | hypothetical protein Pmen_3494 3856193 - 3855411 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pmen_3495 3857374 - 3856226 - | putative aminotransferase TERM 2862 3857466 - 3857512 + r 81 -13.6 -3.38326 | opp_overlap 3857456 3857460 GAAAAGAAGCTGGAA GCTTATGCCGTGCACGCCGAAC GCG GTCCGACGTGCACGGTGGATGC TTACTTGCGCTTGTC engA 3858991 - 3857513 - | GTP-binding protein EngA TERM 2863 3859049 - 3859028 - R 100 -17.3 -3.96705 | overlap 3859022 TTCAGAAAATGCAAA GGCCGCTGC AGGG GCAGCGGCC GGGATACTGCGTGCT Pmen_3497 3860229 - 3859090 - | Pyrrolo-quinoline quinone Pmen_3498 3860872 - 3860234 - | hypothetical protein hisS 3862191 - 3860905 - | histidyl-tRNA synthetase TERM 2864 3862224 - 3862206 - R 77 -11.7 -3.6512 | CAAAGAATCCTTAAA GCGCAGC GATCA GCTGCGC ACGATCACGGCGGCA ispG 3863327 - 3862215 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2865 3862245 - 3862263 + g 73 -13.1 -3.30124 | overlap 3862227 3862254 CACGGCGGCATCGGC GGCGGCC TTCTC GGCCGCC TTGTCGCGGATGAGC Pmen_3501 3864320 - 3863331 - | helix-turn-helix domain-containing protein TERM 2866 3863951 - 3863932 - G 71 -9.2 -3.86202 | TGCCACCACAGGAAA CCGGCGCC GATC AGCGCCAG CAACAGCAGGAAACT Pmen_3502 3865078 - 3864317 - | type IV pilus biogenesis/stability protein PilW Pmen_3503 3866240 - 3865092 - | radical SAM protein Pmen_3504 3866698 - 3866267 - | nucleoside diphosphate kinase TERM 2867 3866762 - 3866734 - R 74 -3.7 -4.81249 | overlap 3866739 3866752 GGTTAAAGCGAAAAA TTAAACCCGCGAA TTA TACGCGGGTTCCG GGATGGCAGCCACAG TERM 2868 3866757 - 3866739 - R 87 -10.2 -4.34557 | overlap 3866734 3866752 AAGCGAAAAATTAAA CCCGCGAA TTA TACGCGGG TTCCGGGATGGCAGC Pmen_3505 3867053 - 3866856 - | hypothetical protein Pmen_3506 3867411 - 3867070 - | ferredoxin, 2Fe-2S type, ISC system hscA 3869280 - 3867415 - | chaperone protein HscA hscB 3869847 - 3869326 - | co-chaperone HscB Pmen_3509 3870180 - 3869857 - | iron-sulfur cluster assembly protein IscA Pmen_3510 3870580 - 3870194 - | scaffold protein Pmen_3511 3871838 - 3870624 - | cysteine desulfurase IscS Pmen_3512 3872366 - 3871869 - | BadM/Rrf2 family transcriptional regulator TERM 2869 3872494 - 3872467 - R 85 -9.1 -4.62783 | opp_overlap 3872493 GATTGACCGCAAAAA GAGGCGGCACT ATAGCA AGAACCGCCTC CCCCTGCATCAGGCA Pmen_3513 3873288 - 3872503 - | serine O-acetyltransferase Pmen_3514 3874069 - 3873281 - | RNA methyltransferase Pmen_3515 3874206 - 3875021 + | inositol-phosphate phosphatase TERM 2870 3875056 - 3875044 - T 93 -5.5 -5.5112 | opp_overlap 3875044, overlap 3875037 TCGAGCAATAAAAAA TCGCC CGG AGCGA TTTTTGACGTCGCGC TERM 2871 3875044 - 3875056 + T 73 -4.8 -4.62069 | opp_overlap 3875044 3875037 TCGAGCAATAAAAAA TCGC CCGGA GCGA TTTTTGACGTCGCGC TERM 2872 3875134 - 3875121 - T 100 -9.5 -5.94713 | opp_overlap 3875121 AGGCCACAAAAAAAA CGCCC CGAG GGGCG TTTTTTATTGCGCGC TERM 2873 3875121 - 3875134 + T 100 -9.5 -5.4505 | opp_overlap 3875121 AGGCCACAAAAAAAA CGCCC CGAG GGGCG TTTTTTATTGCGCGC Pmen_3516 3875697 - 3875155 - | hypothetical protein TERM 2874 3875783 - 3875757 - R 100 -19.6 -4.82667 | opp_overlap 3875757 CTAGGACAGCAAAAA GCCGCGAAAAGT TCG ACTTTTCGCGGC TTGGTCTGCCTTACA TERM 2875 3875757 - 3875783 + r 95 -19.6 -3.29739 | opp_overlap 3875757 CTAGGACAGCAAAAA GCCGCGAAAAGT TCG ACTTTTCGCGGC TTGGTCTGCCTTACA secF 3876733 - 3875816 - | preprotein translocase subunit SecF secD 3878611 - 3876743 - | preprotein translocase subunit SecD yajC 3879012 - 3878683 - | preprotein translocase subunit YajC TERM 2876 3878933 - 3878916 - G 70 -4.1 -4.43844 | TCATCAGGTAGAAAA TGACCAG GAAA CCGATCA GGAATACCCACTCGA TERM 2877 3878975 - 3878951 - G 77 -13.5 -3.61922 | AATACCCACTCGAAA CCGCTGCCGGC AGG GCCAGCAGCCG CAGTGTCAGCGTAGG tgt 3880186 - 3879053 - | queuine tRNA-ribosyltransferase queA 3881232 - 3880189 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 2878 3880705 - 3880729 + g 78 -14.9 -3.31144 | opp_overlap 3880693, overlap 3880725 GAAGTGCAGCCCCGC GGTGGGCGCCG CCA CCGCGCCCGCC TTCTCGGCGTAGACG Pmen_3522 3882154 - 3881324 - | amino acid ABC transporter periplasmic protein TERM 2879 3882295 - 3882309 + H 71 -8.6 -4.07885 | opp_overlap 3882306 AATCGGTAGACGCGG CGGATT CAA AATCCG TTTTCGAAAGGAGTG TERM 2880 3882389 - 3882364 - H 87 -16.9 -3.03159 | opp_overlap 3882364 CCAACCGTTTCAAGA GCCCGCAAGAC TTAG GTCCTGCGGGC TTTTTCATATCTGCG TERM 2881 3882364 - 3882389 + H 100 -14.7 -4.84527 | opp_overlap 3882364 CCAACCGTTTCAAGA GCCCGCAAGAC TTAG GTCCTGCGGGC TTTTTCATATCTGCG Pmen_3523 3882691 - 3882903 + | cold-shock DNA-binding protein family protein TERM 2882 3882923 - 3882942 + F 100 -12.2 -5.67063 | opp_overlap 3882923 CGCTGCTTTGAAGAA CCCCTGAT CTCG ATCAGGGG TTTTTTTATGCTCGC TERM 2883 3882942 - 3882923 - f 82 -12.2 -3.61398 | opp_overlap 3882923 CGCTGCTTTGAAGAA CCCCTGAT CTCG ATCAGGGG TTTTTTTATGCTCGC Pmen_3524 3883008 - 3883505 + | RDD domain-containing protein TERM 2884 3883526 - 3883544 + T 100 -14.6 -4.7254 | opp_overlap 3883526 GGCAGATGCAAAAAA GCCGGTTC ACT GAACCGGC TTTTTCATGCGGGCT TERM 2885 3883544 - 3883526 - T 100 -14.6 -5.1287 | opp_overlap 3883526 GGCAGATGCAAAAAA GCCGGTTC ACT GAACCGGC TTTTTCATGCGGGCT Pmen_3525 3884630 - 3883566 - | permease YjgP/YjgQ family protein Pmen_3526 3885741 - 3884623 - | permease YjgP/YjgQ family protein TERM 2886 3886371 - 3886347 - g 75 -4.9 -4.63218 | overlap 3886351 3886366 GCGCCTTGAAGAAAA TCACCCTGGTC GCC GACAAGGCCGA GCTGGCCGATGCCGA Pmen_3527 3885833 - 3887371 + | leucyl aminopeptidase Pmen_3528 3887483 - 3887902 + | DNA polymerase III, chi subunit Pmen_3529 3887963 - 3888406 + | hypothetical protein TERM 2887 3889153 - 3889129 - g 74 -7.8 -4.19238 | overlap 3889142 CCTGGAAGTGGAAAA CCACGACGAG AAAGG CTCGCTGTGG AACCTGCGCTACCCG valS 3888569 - 3891400 + | valyl-tRNA synthetase TERM 2888 3891422 - 3891443 + F 100 -14.4 -5.49579 | CGCAATACCCACAGG CCCGCGCC CTAACC GGCGCGGG TTTTGTTTTTTCTGC TERM 2889 3891687 - 3891671 - g 78 -6.5 -4.65895 | GGTCGGACTGAAAAA CGGCC TGCGCTG GGCCG ATATCGAGGAAGGCA Pmen_3531 3891504 - 3892937 + | Na+/H+ antiporter NhaC Pmen_3532 3893193 - 3894569 + | citrate transporter Pmen_3533 3894607 - 3894903 + | hypothetical protein TERM 2890 3895592 - 3895617 + G 77 -3.9 -4.81249 | gap 1 TGCACGCCGAGCTGC GCCG-CGCCG GTCTGGA CGGCTTCGGC TTTTTCGATTTCACC TERM 2891 3896719 - 3896669 - g 79 -16.7 -3.04144 | TGTTCATCTCCAACA CCGCCACCGCCGTGCTGATGGCC CCGGT GGCCATCGCCACGGCGCAGGCGC TGGGCGCCTCGCCGC TERM 2892 3896888 - 3896911 + G 75 -4.6 -4.64766 | gap 1 TGCTGGTGATGCTGG TCAGCGTGC TGCTGGT GC-CGCTGA TTTTTCCGCTCTGAG Pmen_3534 3895096 - 3896925 + | citrate transporter TERM 2893 3897790 - 3897804 + G 71 -9.2 -3.86015 | GAGCTGTGGTGCCCG GGTGGC GAG GCCGCC TTTCTCAAGCGCATG Pmen_3535 3897040 - 3898041 + | putative SAM-dependent methyltransferase Pmen_3536 3899380 - 3898136 - | citrate transporter Pmen_3537 3900152 - 3899610 - | isochorismatase hydrolase Pmen_3538 3903589 - 3900155 - | SMC domain-containing protein TERM 2894 3901453 - 3901493 + g 74 -2.6 -4.71426 | gap 1 GTTCCTGCTCCAGCC CCTGCAGACGC-TCG TTCTGTTCGCGT TGACGCGCCTGCAGG TTTTCTTCATCGCGC TERM 2895 3901999 - 3902015 + g 76 -6.5 -4.48987 | GATCCTGAATGCGCT GCTCCTG CTC CAGCAGC TTTTCCTTGTCGGCA TERM 2896 3902519 - 3902505 - G 72 -11.4 -3.55444 | GGGGTAGCCCTCAAA CGCGCT TGC AGCGCG TCACGCTGCTCGGCC Pmen_3539 3904010 - 3903648 - | hypothetical protein Pmen_3540 3905198 - 3904101 - | diguanylate cyclase TERM 2897 3905491 - 3905480 - R 71 -7.2 -4.15222 | ATGTTGGCGAAGAAA GCGG ATTG CCGC CTGCACGGAACGGGT Pmen_3541 3906467 - 3905508 - | alcohol dehydrogenase Pmen_3542 3908095 - 3906881 - | exonuclease subunit SbcD TERM 2898 3907164 - 3907190 + g 74 -15.1 -3.03124 | opp_overlap 3907164 ACCTCGAGCCACACA GGCCGCTCGGG CATGC CCTGGGCGGCC TGTTCGGCGATGGCG Pmen_3543 3908321 - 3909118 + | ribosomal protein L11 methylase-like protein Pmen_3544 3909122 - 3910468 + | amino acid permease-associated region Pmen_3545 3910952 - 3910479 - | AsnC family transcriptional regulator TERM 2899 3910592 - 3910536 - G 81 -15.1 -3.54424 | gap 1 CTGCATGCCGGGAAA CTGCTCGATGGCGCCGCGCACCTCGC TCAGGC GCGCCATGCTCGGCGCC-TCGACCAG CACCAGCATGTCGGT Pmen_3546 3911021 - 3912274 + | inner membrane protein YjeH Pmen_3547 3912509 - 3913879 + | TRAP-type uncharacterized transport system periplasmic component-like protein TERM 2900 3913898 - 3913928 + T 100 -17 -3.74693 | opp_overlap 3913903, overlap 3913903 CGGGCAGCGGCCACA AAAAAGCCCGCGAT ACG ATCGCGGGCTTTTC TTTCGTAGGGTGCGC TERM 2901 3913903 - 3913923 + T 100 -16.9 -4.93877 | opp_overlap 3913903, overlap 3913898 AGCGGCCACAAAAAA GCCCGCGAT ACG ATCGCGGGC TTTTCTTTCGTAGGG TERM 2902 3913923 - 3913903 - T 100 -16.9 -5.24531 | opp_overlap 3913903 3913898 AGCGGCCACAAAAAA GCCCGCGAT ACG ATCGCGGGC TTTTCTTTCGTAGGG Pmen_3548 3915663 - 3913996 - | aminopeptidase Y TERM 2903 3916005 - 3915985 - g 73 -6 -4.33417 | overlap 3915986 3915987 CTGATCGACAAGAAA CCCGACGG CAGCC CCGCCGTG CTGCACGCCCGCGAC TERM 2904 3916613 - 3916583 - g 70 -11 -3.58343 | overlap 3916584 GCGATTACGTGGAAA GCGAGGACCTGCCC GAA GAGCAGGCCCGCGA GAAGACCAAGACCCT TERM 2905 3916612 - 3916584 - g 72 -14.5 -2.74792 | overlap 3916583 CGATTACGTGGAAAG CGAGGACCTGCCC GAA GAGCAGGCCCGCG AGAAGACCAAGACCC Pmen_3549 3915943 - 3916950 + | nucleoid-associated protein NdpA Pmen_3550 3916952 - 3917800 + | hypothetical protein Pmen_3551 3917797 - 3918117 + | glutaredoxin Pmen_3552 3919118 - 3918183 - | glutathione S-transferase-like protein TERM 2906 3918592 - 3918571 - G 93 -10.1 -4.65895 | overlap 3918551 3918549 TGCGCGACCGAAAAA TCGGCCAGC GACG GCTCGCCGA ACAGAAAGTCGCCGT Pmen_3553 3919464 - 3919183 - | GIY-YIG nuclease superfamily protein Pmen_3554 3920225 - 3919461 - | CDP-diacylglycerol-choline O-phosphatidyltransferase Pmen_3555 3920749 - 3920279 - | hypothetical protein Pmen_3556 3920910 - 3921869 + | transcriptional regulator TERM 2907 3921978 - 3921995 + T 82 -12.7 -3.60151 | opp_overlap 3921978 CGCGGCCATGAAAAA GGGAGCC CGAG GGCTCCC TTGTCATTTGACGCA TERM 2908 3921995 - 3921978 - T 100 -12.7 -4.72272 | opp_overlap 3921978 CGCGGCCATGAAAAA GGGAGCC CGAG GGCTCCC TTGTCATTTGACGCA Pmen_3557 3922778 - 3922017 - | ABC transporter related Pmen_3558 3923885 - 3922788 - | polar amino acid ABC transporter, inner membrane subunit TERM 2909 3923677 - 3923631 - G 71 -12.3 -3.26947 | gap 1, overlap 3923641 GAAGCCGTACATGAA CTGGCCGAAACG-CTGCTGGAT GAAC ACCCAGCAGGCGCCTCCGCCGG TGCAGTCGGCGCGGG Pmen_3559 3925079 - 3923895 - | polar amino acid ABC transporter, inner membrane subunit TERM 2910 3925061 - 3925010 - G 72 -13.7 -3.07233 | gap 2, overlap 3925045 CGAGAATCTGGAACA GCCACGCGCGCACCTGAGGATCGGT CCAG ACCGAACCTC-G-CGGGCGCGGGGC ATTAGCAGTAGTTTG TERM 2911 3925168 - 3925144 - R 100 -20 -3.75024 | CGTCATCAGGAACAA CCGGCGCGCC ATGCA GGCGCGCCGG TACAGACGATCAACG Pmen_3560 3926206 - 3925178 - | extracellular solute-binding protein TERM 2912 3926009 - 3925990 - G 70 -6.4 -4.18018 | gap 1 TGGCGTCACCGAAAA CCGCGGCTG CAA CAGC-ACGG CAGACGTCGACGTCC Pmen_3561 3926684 - 3927343 + | carboxylesterase TERM 2913 3927537 - 3927513 - g 74 -5.5 -4.45485 | overlap 3927514 3927515 AGCAGATCGAGAAAA CCCCGCTCGCG GCG CGCGAGCTGCC CGCCAGCACCTACGA Pmen_3562 3927458 - 3929359 + | acyl-CoA synthetase Pmen_3563 3929551 - 3930489 + | cyclic nucleotide-binding protein Pmen_3564 3930588 - 3931751 + | peptidase M19, renal dipeptidase TERM 2914 3931891 - 3931873 - g 81 -7.4 -4.69656 | overlap 3931875 AAGCACTCAAGAAAA TGTTCGGC AAA GCCGAAGA CGAGCAGCCACAACC Pmen_3565 3931851 - 3933299 + | ATP-dependent RNA helicase RhlB TERM 2915 3933340 - 3933319 - f 100 -13.7 -5.14563 | opp_overlap 3933319 TGCGCTAGCAAAAAA GGCGAAGCC GCGA GGCCTCGCC TTTTTTGTTGCCCCA TERM 2916 3933319 - 3933340 + F 100 -11.5 -5.4505 | opp_overlap 3933319 TGCGCTAGCAAAAAA GGCGAAGCC GCGA GGCCTCGCC TTTTTTGTTGCCCCA Pmen_3566 3933635 - 3934594 + | ornithine cyclodeaminase TERM 2917 3935512 - 3935477 - g 74 -14.6 -3.0497 | opp_overlap 3935475, overlap 3935465 ACACCAGCCTCAACA TCCGCCGCCCGGCGCA CACC TGGGCCGGGCTGCGCA GCTTCGTCGCCGACG Pmen_3567 3934597 - 3935742 + | FAD dependent oxidoreductase TERM 2918 3935770 - 3935814 + F 90 -14.9 -3.53444 | gap 1, opp_overlap 3935745 3935744 TCGCAGATCGCATCC GCAGCCGGGGGCGGCGCCGG CGCGTC CTGATGACGCCCCCGGC-GC TTTGCGGCACACTCG Pmen_3568 3935855 - 3936484 + | YheO domain-containing protein Pmen_3569 3936489 - 3936935 + | hypothetical protein TERM 2919 3936963 - 3936936 - T 100 -22 -3.30771 | opp_overlap 3936949 3936950 3936951 CGACATGCCCCATAA GCCCCCACCGGC AAGC GCCGGCGGGGGC CCGCCGCGTCACTTC Pmen_3570 3937586 - 3936972 - | isochorismatase hydrolase TERM 2920 3937940 - 3937963 + G 77 -13.8 -3.48276 | TCCACGCGCAAGGTG GCGCCGACCG ACAG CGGTCAGCGC TTCTATCACCAGGCC Pmen_3571 3937730 - 3938683 + | LysR family transcriptional regulator Pmen_3572 3941124 - 3938764 - | DNA polymerase II TERM 2921 3941908 - 3941929 + G 73 -12.3 -3.35679 | GCTGTTCCATGCGGT GTCGGCGTT CAAC AACGCCGGC TTCTCGATCCACGCC TERM 2922 3942116 - 3942126 + G 72 -4.6 -4.49311 | overlap 3942093 GGCACGGTGCTCCTG CTGC TGG GCGG TTTTCTCGTCATGCT Pmen_3573 3941414 - 3942742 + | H(+)-transporting two-sector ATPase Pmen_3574 3942735 - 3943427 + | TrkA domain-containing protein TERM 2923 3943450 - 3943466 + F 80 -10.1 -4.08216 | opp_overlap 3943427 3943461 ACCGCCGCGCCAGGC GGCGCTA CAA TGGCGCC TTTTGCGCAGAATGG Pmen_3575 3943459 - 3943920 + | globin Pmen_3576 3943917 - 3944255 + | peptidylprolyl isomerase, FKBP-type Pmen_3577 3944248 - 3945174 + | SAM-dependent methyltransferase-like protein Pmen_3578 3946048 - 3945272 - | cationic amino acid ABC transporter, periplasmic binding protein Pmen_3579 3947903 - 3946353 - | anaerobic nitric oxide reductase transcription regulator TERM 2924 3947954 - 3947918 - H 73 -10.3 -3.68351 | opp_overlap 3947907 TTTCGACTACTCAAA GTCTTTATGACTCAC AACCAGA GCGAGTCATTAAGAC AACAAAATTTTCAAG TERM 2925 3948546 - 3948530 - g 75 -9.3 -4.12188 | overlap 3948531 CCAGTATGCGCAAAA CGCCGCG GCG CCCGGCG GCTGGCGTGGCGCGC TERM 2926 3948902 - 3948875 - g 71 -12.6 -3.32268 | GAACGAGTCGGACAA GCCGCTGGCGCT GATC AGCGCCGGCGTC GGCATCACCCCGGCG Pmen_3580 3948096 - 3949277 + | nitric oxide dioxygenase Pmen_3581 3949297 - 3949548 + | hypothetical protein TERM 2927 3949736 - 3949752 + G 74 -10.1 -3.78775 | CCCTTCGGTTTCGGC CTGGCGA TCA TCGCCGG TTTCCTGCTCACCGC Pmen_3582 3949535 - 3950710 + | NnrS family protein Pmen_3583 3951464 - 3950757 - | sugar fermentation stimulation protein A Pmen_3584 3952635 - 3951454 - | hypothetical protein TERM 2928 3951500 - 3951524 + g 75 -14.3 -3.26722 | overlap 3951497 CCGCGGGCGATGCGT TCGACCGCCTG CTG CAGGCGCTCGA TGTTCTGCGTGTAGG TERM 2929 3952437 - 3952396 - G 73 -13 -3.28791 | overlap 3952353 3952354 ACGCTCGGCGTAGAA GCCG-GCGATGGCCTCGCGC AGCT GCGGCAGGCCA-CGCGCGGC GGTATAGCGGGTATG Pmen_3585 3952893 - 3953339 + | TraR/DksA family transcriptional regulator TERM 2930 3953345 - 3953372 + F 78 -9.9 -3.9279 | gap 2, overlap 3953346 3953348 CGGTTCCTGATCTGA C-GA-CGGGGCGC TTAG GCGCCCCGCTCTG TTTCTGGCCTTCGCT TERM 2931 3953346 - 3953370 + F 86 -13.6 -3.55191 | gap 1, overlap 3953345 3953348 GGTTCCTGATCTGAC GA-CGGGGCGC TTAG GCGCCCCGCTC TGTTTCTGGCCTTCG TERM 2932 3953348 - 3953367 + F 78 -16.4 -2.60065 | overlap 3953346 3953345 TTCCTGATCTGACGA CGGGGCGC TTAG GCGCCCCG CTCTGTTTCTGGCCT Pmen_3586 3953390 - 3954274 + | glutamyl-Q tRNA(Asp) synthetase Pmen_3587 3954414 - 3954590 + | hypothetical protein TERM 2933 3956202 - 3956176 - g 70 -10.8 -3.54424 | overlap 3956154 3956177 3956192 GCCCAGCTGGCCAAA CCGCTGGGCG CCAAGAC CGCCCAGCGC GAGGTGGAGCAGGCC Pmen_3588 3954574 - 3957528 + | two-component sensor kinase CbrA TERM 2934 3958300 - 3958251 - g 84 -14.2 -3.96148 | gap 1, opp_overlap 3958292, overlap 3958216 TTCGGTCACGAGAAA GGCGCCTTCACCGGCGCCAGCGC CGGAC GCGCCGGC-CTGGTGGAAGCGGC CGATGGCGGCACCCT Pmen_3589 3957582 - 3959015 + | two-component response regulator CbrB TERM 2935 3959091 - 3959119 + F 84 -3.1 -5.26316 | opp_overlap 3959091 TATCTCGTAACAAAA GCCGGGTCT AAAGGTAACGG AAACCCGGC TTTTTTCTACCCTCC TERM 2936 3959119 - 3959091 - f 76 -5.3 -4.63932 | opp_overlap 3959091 TATCTCGTAACAAAA GCCGGGTCT AAAGGTAACGG AAACCCGGC TTTTTTCTACCCTCC TERM 2937 3959385 - 3959372 - f 93 -8.1 -4.95547 | CCGAGAACAACAAAA CTGCC TTCA GGCAG CACCCGAACTGGTTG TERM 2938 3959564 - 3959533 - f 85 -2.1 -5.3798 | opp_overlap 3959551, overlap 3959548 CAATAACAACAAAAA CAAAGCACGCACC AACTTG GGGGGGAGCTTCG GCTCCCCCAGTAGCT TERM 2939 3961022 - 3961005 - g 78 -10.5 -4.07568 | opp_overlap 3960995 3960993 3961002 CCTGCTGCTGGAAAA CCCGCGC TTTC GCGCAGG CTATGACTTCCTGCT TERM 2940 3961198 - 3961180 - g 78 -13.8 -3.55563 | overlap 3961151 3961150 3961181 AGCGCACCGCGCAAA CGCCGCCG CAG CGGCGGCA AACGCAAGCGCGGCG TERM 2941 3961197 - 3961181 - g 72 -15.1 -2.73124 | overlap 3961151 3961150 3961180 GCGCACCGCGCAAAC GCCGCCG CAG CGGCGGC AAACGCAAGCGCGGC Pmen_3590 3959842 - 3961233 + | poly(A) polymerase Pmen_3591 3961230 - 3961718 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase panB 3961992 - 3962792 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 3962789 - 3963646 + | pantoate--beta-alanine ligase TERM 2942 3963679 - 3963697 + F 100 -16 -4.54727 | opp_overlap 3963658 3963673 CGGTTAAACTCGCGA GGCCCGGT CGC ACCGGGCC TTTTGCTTTCCCGGA pgi 3963725 - 3965389 + | glucose-6-phosphate isomerase Pmen_3595 3965694 - 3967631 + | acetyl-CoA synthetase Pmen_3596 3967752 - 3968618 + | hypothetical protein TERM 2943 3969480 - 3969422 - g 100 -18 -4.56597 | overlap 3969425 GCCGGCGTTCAAAAA GGACGGCAGCGTCACCGCCGGCAACGCC TCC AGCCTCAACGACGGCGCCGCTGCCGTGC TGCTGATGAGCGCGA TERM 2944 3969477 - 3969425 - g 89 -18.3 -3.23708 | overlap 3969422 GGCGTTCAAAAAGGA CGGCAGCGTCACCGCCGGCAACGCC TCC AGCCTCAACGACGGCGCCGCTGCCG TGCTGCTGATGAGCG Pmen_3597 3968709 - 3969890 + | acetyl-CoA acetyltransferase TERM 2945 3969957 - 3969987 + F 70 -3.2 -4.71828 | gap 1 CCCCCCGGATTGCAT CCGGGCTACCTCA TGGTGC TGAGGC-GACCGG TTTTCTTGATAAACT Pmen_3598 3970033 - 3971049 + | hypothetical protein TERM 2946 3973752 - 3973733 - g 70 -13.6 -3.03159 | GGAAGTGGGCGAAGA CGAGCAGG CCGC CCTGCTCG AAGGCATCTACCGCA Pmen_3599 3971154 - 3974036 + | hypothetical protein Pmen_3600 3974033 - 3974329 + | hypothetical protein Pmen_3601 3974343 - 3974645 + | hypothetical protein TERM 2947 3974709 - 3974675 - T 100 -25.8 -4.82901 | opp_overlap 3974679 GCCCGGCCACAAAAA CCAAGGCCCCGCCGGT CAC ACCGGCGGGGCCTTTG AGCATCCATGCCTTG TERM 2948 3974679 - 3974705 + T 100 -25.2 -3.57792 | opp_overlap 3974675 GGCCACAAAAACCAA GGCCCCGCCGGT CAC ACCGGCGGGGCC TTTGAGCATCCATGC Pmen_3602 3974996 - 3974799 - | CsbD family protein TERM 2949 3975017 - 3975046 + r 81 -13.5 -3.39895 | overlap 3975018 3975021 TTCTCCCGGTGACGG GGAAGCGGCCGGC GTGA GCCGGCCACTTCG TTGATTAGTCAGCCG TERM 2950 3975018 - 3975045 + r 83 -17 -2.63723 | overlap 3975017 3975021 TCTCCCGGTGACGGG GAAGCGGCCGGC GTGA GCCGGCCACTTC GTTGATTAGTCAGCC TERM 2951 3975021 - 3975042 + r 79 -12.9 -3.46824 | overlap 3975018 3975017 CCCGGTGACGGGGAA GCGGCCGGC GTGA GCCGGCCAC TTCGTTGATTAGTCA Pmen_3603 3975401 - 3975051 - | transport-associated TERM 2952 3975761 - 3975744 - R 100 -12.7 -5.28778 | opp_overlap 3975744 ATCAGGCACAAAAAA GGGCTCC CGCA GGAGCCC TTCTCGTTCGAACCG TERM 2953 3975744 - 3975761 + r 79 -12.7 -3.50853 | opp_overlap 3975744 ATCAGGCACAAAAAA GGGCTCC CGCA GGAGCCC TTCTCGTTCGAACCG Pmen_3604 3977965 - 3975788 - | polynucleotide phosphorylase/polyadenylase TERM 2954 3977885 - 3977900 + g 70 -2.5 -4.58724 | CTTGAACTGTTTGAT TACCG GGTTCA CGGTG TTTTCCTTCTCTTTG TERM 2955 3978041 - 3977983 - R 100 -24.7 -4.4267 | gap 1, overlap 3977977 3977984 TTCGAAAAGCCAAAA GCTGGAAGCCCGCAGCCGCACTCCGGGG TAAG CCCCGAGGTGCCGCTGCGAACTTCCAG- CTTCCAACTTGTGCA TERM 2956 3978041 - 3977984 - R 100 -30.7 -3.24879 | overlap 3977977 3977983 TCGAAAAGCCAAAAG CTGGAAGCCCGCAGCCGCACTCCGGGG TAAG CCCCGAGGTGCCGCTGCGAACTTCCAG CTTCCAACTTGTGCA rpsO 3978337 - 3978068 - | 30S ribosomal protein S15 TERM 2957 3978449 - 3978475 + r 82 -13 -3.59262 | AGCCACCCTCGCAAT CCTGACGCTGGT ATC GCCAGCCTCAGG TTTCGACCTCTCGGC Pmen_3606 3979425 - 3978505 - | tRNA pseudouridine synthase B rbfA 3979817 - 3979428 - | ribosome-binding factor A TERM 2958 3979913 - 3979870 - R 100 -15.3 -4.1899 | gap 2, opp_overlap 3979878, overlap 3979878 GCAGCGGACGTAAAA GCGGCAAACGCCCGGCCGCGC ATGA GCGGGGCCGGGCGTT-GC-GT GATCGGGATGCCGCG TERM 2959 3979907 - 3979878 - R 100 -22.1 -3.66666 | opp_overlap 3979878, overlap 3979870 CGTAAAAGCGGCAAA CGCCCGGCCGCGC ATGA GCGGGGCCGGGCG TTGCGTGATCGGGAT TERM 2960 3979878 - 3979907 + r 100 -22.1 -3.09635 | opp_overlap 3979878 3979870 CGTAAAAGCGGCAAA CGCCCGGCCGCGC ATGA GCGGGGCCGGGCG TTGCGTGATCGGGAT infB 3982416 - 3979930 - | translation initiation factor IF-2 nusA 3983925 - 3982444 - | transcription elongation factor NusA Pmen_3610 3984544 - 3984086 - | hypothetical protein TERM 2961 3984594 - 3984580 - R 100 -11.4 -5.63517 | opp_overlap 3984580 TGTGCAAATAAAAAA TGGGCG AAA CGCCCA TCCCTTCAACCCACC TERM 2962 3984663 - 3984648 - R 100 -10.4 -5.10461 | TTCAGCTAACAAAAA GCCCCT GAAA AGGGGC CTGCTGAAACTGGTT TERM 2963 3984843 - 3984813 - R 95 -19.9 -3.19449 | opp_overlap 3984816 3984820, overlap 3984816 3984820 CAAACACTCCAGCAA CAAGAAAGCCCGC GAACT GCGGGCTTTCTTG AGTATGGTACCGAGG TERM 2964 3984840 - 3984816 - R 95 -15.8 -3.73088 | opp_overlap 3984816 3984820, overlap 3984813 3984820 ACACTCCAGCAACAA GAAAGCCCGC GAACT GCGGGCTTTC TTGAGTATGGTACCG TERM 2965 3984816 - 3984840 + r 85 -16.5 -3.14468 | opp_overlap 3984816 3984813 3984820, overlap 3984820 ACACTCCAGCAACAA GAAAGCCCGCG AAC TGCGGGCTTTC TTGAGTATGGTACCG TERM 2966 3984820 - 3984836 + r 89 -11.5 -4.23615 | opp_overlap 3984820 3984816 3984813, overlap 3984816 TCCAGCAACAAGAAA GCCCGCG AAC TGCGGGC TTTCTTGAGTATGGT TERM 2967 3984836 - 3984820 - R 89 -10.8 -4.48713 | opp_overlap 3984816 3984820, overlap 3984816 3984813 TCCAGCAACAAGAAA GCCCGC GAACT GCGGGC TTTCTTGAGTATGGT secG 3985318 - 3984941 - | preprotein translocase subunit SecG tpiA 3986077 - 3985322 - | triosephosphate isomerase Pmen_3613 3987480 - 3986143 - | phosphoglucosamine mutase TERM 2968 3986941 - 3986905 - G 70 -10.7 -3.54543 | ACCCAGCTCGCGAAA CACGCTTGGCGCGACCT TGT AGGCAGCGCCATGGGCG CAATCGATGACGATC Pmen_3614 3988345 - 3987494 - | dihydropteroate synthase TERM 2969 3987776 - 3987764 - G 72 -6.9 -4.19735 | CTTGGCAAAACCAAA GCCCG GAT CGAGC ACGATCCGCTCGGCG TERM 2970 3988323 - 3988300 - G 100 -19.6 -3.93401 | opp_overlap 3988294 GGGACAAATCAAGAA GCCGGCTGCC ACAG GGCAGCCGGC TCGGGTATTGCCGTT Pmen_3615 3990276 - 3988354 - | membrane protease FtsH catalytic subunit TERM 2971 3990376 - 3990358 - R 78 -10.2 -3.86283 | CTAACTTACACCAAA CGCCCGCA TCC CGCAGGCG CCGTCTGTAACCCTT Pmen_3616 3991063 - 3990440 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 2972 3990921 - 3990938 + g 73 -6.3 -4.33165 | gap 1 ACCACGGTCATGCCC GGA-CGCA GGA TGCGATCC TTTTCCTGGATTTCC Pmen_3617 3991154 - 3991465 + | hypothetical protein Pmen_3618 3992010 - 3991549 - | hypothetical protein TERM 2973 3991930 - 3991900 - GT 77 -11.8 -3.61089 | opp_overlap 3991914, overlap 3991897 3991894 3991914 3991915 CTGCAACAACCACAA GCCGCCGACCCAAA GGG TCTGGGCCAGCTGC CAACTGACGGCAGCG greA 3992443 - 3991967 - | transcription elongation factor GreA carB 3995661 - 3992440 - | carbamoyl phosphate synthase large subunit TERM 2974 3992870 - 3992912 + g 93 -19.2 -2.52896 | TCGCTGGCACCCAGC TGGGCCTTGGCGAAGGCTTC GCC GAAGCTGTCGCCGACGCCCA TGACTTCACCGGTGG Pmen_3621 3996846 - 3995698 - | carbamoyl phosphate synthase small subunit TERM 2975 3996808 - 3996795 - G 77 -6.7 -4.57341 | AATCGCCGCGAAAAA TGCTG CCGT CAGCA AGGGCCAAAATGGCA TERM 2976 3996897 - 3996924 + r 100 -14.2 -5.63517 | opp_overlap 3996897 GCAGGTTGTAAAAAA GCGGGATGACGT GTGA AGGTCATCCCGC TTTTTTATTTGAGCC TERM 2977 3996924 - 3996897 - R 100 -14.2 -5.02074 | opp_overlap 3996897 GCAGGTTGTAAAAAA GCGGGATGACGT GTGA AGGTCATCCCGC TTTTTTATTTGAGCC Pmen_3622 3997839 - 3997036 - | dihydrodipicolinate reductase TERM 2978 3997857 - 3997879 + r 100 -16.2 -4.19238 | opp_overlap 3997843, overlap 3997858 ATCAGCTCCAAGCCG TCGCCCCGGC ATT GCCGGGGCGC TTTTGGGGTTAAACG TERM 2979 3997858 - 3997878 + r 90 -19.7 -3.11222 | opp_overlap 3997843, overlap 3997857 TCAGCTCCAAGCCGT CGCCCCGGC ATT GCCGGGGCG CTTTTGGGGTTAAAC Pmen_3623 3999015 - 3997888 - | chaperone protein DnaJ TERM 2980 3998609 - 3998625 + g 70 -10.1 -3.63515 | ACGCGAATGGTCACG GTGGTGC CGC GCACCGC TTCTTCCAGGTCCAG TERM 2981 3998801 - 3998762 - G 70 -11.3 -3.55444 | gap 1, overlap 3998746 TTGGCACCGCCGAAA CCGGCGCCACCGCCGCCG CCCAT CTGCGG-GTCGACGCCGG CATGGCCGTACTGGT TERM 2982 3999083 - 3999053 - R 95 -20.5 -2.88544 | gap 1, overlap 3999070 CGTGAGCTCCAGATA CGCCGACGCGGGAG AAGG CTCCCGCG-CGGCG AATCCTGCCCGTCGC TERM 2983 3999148 - 3999122 - R 93 -15.1 -3.9392 | opp_overlap 3999121 3999120 3999114 3999124, overlap 3999125 GTGGAGCGTAAAGAA GAGGCGGCCCG CTTGC CGGGCCGCGTC CCTTACTTGTTCTCC TERM 2984 3999145 - 3999125 - R 79 -15.4 -2.73085 | opp_overlap 3999124 3999121 3999120 3999114, overlap 3999122 GAGCGTAAAGAAGAG GCGGCCCG CTTGC CGGGCCGC GTCCCTTACTTGTTC Pmen_3624 4001064 - 3999151 - | molecular chaperone DnaK TERM 2985 4001156 - 4001144 - R 73 -4.7 -4.65895 | overlap 4001145 CGCTTGACTGAAAAA TGGGG TCG CCCCC GAAAATTTCAAGCCT Pmen_3625 4001733 - 4001164 - | GrpE protein TERM 2986 4003021 - 4002970 - g 100 -12.3 -4.32034 | gap 3 TCATTATCAGGAAAA GGCCGCC-GA-GCTCAGC-GCTCTGC GCA GCAGTGCCGCCGAGCGCCTGGCCGCC GCCGTGGAACAGGAG Pmen_3626 4001891 - 4003567 + | DNA repair protein RecN TERM 2987 4003632 - 4003649 + T 89 -12.7 -4.05446 | opp_overlap 4003632 GGCCAAAGCAAAAAA GGCGACC CGAG GGTCGCC TTTCTCATTGCCGCA TERM 2988 4003649 - 4003632 - T 100 -12.7 -5.37593 | opp_overlap 4003632 GGCCAAAGCAAAAAA GGCGACC CGAG GGTCGCC TTTCTCATTGCCGCA Pmen_3627 4004090 - 4003671 - | ferric uptake regulator family protein TERM 2989 4004091 - 4004111 + H 83 -15.5 -3.06501 | GGTCTGCTTTCTCAT GGATGCTGC TTC GCAGCATCC TTCAATACGGGTATG Pmen_3628 4004170 - 4004688 + | SmpA/OmlA domain-containing protein TERM 2990 4004739 - 4004691 - T 78 -14 -3.14051 | gap 1, opp_overlap 4004706, overlap 4004706 CGATCCGCAGTAATA CG-CGGACACGAAAAAGCCCGGA ATCT TCCGGGCTTTTTTGCATCTGGCG ATCGCTCCAGTAGAG TERM 2991 4004706 - 4004723 + T 100 -12.7 -5.1287 | opp_overlap 4004691 4004706 CGCGGACACGAAAAA GCCCGGA ATCT TCCGGGC TTTTTTGCATCTGGC TERM 2992 4004723 - 4004706 - T 100 -12.7 -4.8048 | opp_overlap 4004706, overlap 4004691 CGCGGACACGAAAAA GCCCGGA ATCT TCCGGGC TTTTTTGCATCTGGC Pmen_3629 4005087 - 4004767 - | hypothetical protein Pmen_3630 4005514 - 4005080 - | cyclase/dehydrase Pmen_3631 4006917 - 4005514 - | sodium:neurotransmitter symporter smpB 4007006 - 4007527 + | SsrA-binding protein Pmen_3633 4008548 - 4007775 - | GntR family transcriptional regulator Pmen_3634 4008846 - 4010540 + | L-lactate transport TERM 2993 4010586 - 4010566 - f 86 -13.9 -3.54459 | overlap 4010567 CCAAGCGCCTTGAAA CGCCCCGGC CAT GCCGGGGCT ACTGCCGTCAGGCTA TERM 2994 4010585 - 4010567 - f 84 -17.4 -2.72461 | overlap 4010566 CAAGCGCCTTGAAAC GCCCCGGC CAT GCCGGGGC TACTGCCGTCAGGCT TERM 2995 4011410 - 4011385 - g 72 -13.3 -3.15544 | overlap 4011406 CCCGATGGTGATCAA GGGCATCCTCG ACCC CGAAGACGCCC GCGACGCGGTGACCT lldD 4010633 - 4011772 + | L-lactate dehydrogenase TERM 2996 4013394 - 4013407 + G 71 -9.5 -3.85817 | CTGTACGTGGCCAAG CCGGC GCTG GCCGG TTTCTACCGCGAGCT Pmen_3636 4011777 - 4013549 + | D-lactate dehydrogenase Pmen_3637 4013546 - 4013905 + | IS66 Orf2 family protein TERM 2997 4014994 - 4014982 - g 72 -6.9 -4.20354 | overlap 4014983 AACCCAAGGGCAAAA CCGGC CGT GCCGA CATGGCGCTGAACCT Pmen_3638 4013925 - 4015487 + | transposase IS66 TERM 2998 4015637 - 4015620 - T 75 -2.5 -4.98255 | overlap 4015621 4015622 CGCGAACGAGAAAAA TCGCGGC TGAA GCCGCTC CTACACGAAACGCGC TERM 2999 4015753 - 4015723 - T 100 -19.8 -4.37092 | opp_overlap 4015724 4015728, overlap 4015724 ATCCGGGCTACAAAA GCAAAGGCCCGCCA ATT TGGCGGGCCTTTGT GTTGACGCTGCAAGC TERM 3000 4015752 - 4015724 - T 100 -23.3 -3.21934 | opp_overlap 4015724 4015728, overlap 4015723 TCCGGGCTACAAAAG CAAAGGCCCGCCA ATT TGGCGGGCCTTTG TGTTGACGCTGCAAG TERM 3001 4015724 - 4015752 + T 100 -23.3 -3.04144 | opp_overlap 4015723 4015724, overlap 4015728 TCCGGGCTACAAAAG CAAAGGCCCGCCA ATT TGGCGGGCCTTTG TGTTGACGCTGCAAG TERM 3002 4015728 - 4015748 + T 100 -18.3 -4.19624 | opp_overlap 4015724 4015723, overlap 4015724 GGCTACAAAAGCAAA GGCCCGCCA ATT TGGCGGGCC TTTGTGTTGACGCTG Pmen_3639 4018335 - 4015771 - | ATPase Pmen_3640 4019192 - 4018455 - | nitroreductase Pmen_3641 4019807 - 4019322 - | peroxiredoxin TERM 3003 4019921 - 4019894 - R 86 -14.2 -3.48593 | opp_overlap 4019900, overlap 4019900 CACGCCGGCATACAA GAAAAAGGCGCC ATGA GGCGCCTTTATC GCGAGCTTTGAGCTT TERM 3004 4019900 - 4019915 + r 82 -11.8 -3.8709 | opp_overlap 4019894 4019900 GGCATACAAGAAAAA GGCGCC ATGA GGCGCC TTTATCGCGAGCTTT TERM 3005 4019915 - 4019900 - R 100 -11.8 -5.24796 | opp_overlap 4019900, overlap 4019894 GGCATACAAGAAAAA GGCGCC ATGA GGCGCC TTTATCGCGAGCTTT Pmen_3642 4020468 - 4019983 - | peptidylprolyl isomerase, FKBP-type Pmen_3643 4020480 - 4020764 + | hypothetical protein Pmen_3644 4020765 - 4021949 + | acetate kinase TERM 3006 4023187 - 4023147 - g 72 -13.1 -3.09933 | opp_overlap 4023181, overlap 4023142 CCCGAAGGCAGCGAA CCGCGCACCGTGCAGGCAG CGG CCATCTGCCAGGCGCGCGG CATCGCCCGTTGCGT Pmen_3645 4021959 - 4024052 + | phosphate acetyltransferase TERM 3007 4024273 - 4024226 - f 93 -14.8 -3.85698 | gap 1, overlap 4024227 CGGGGCTCGTAGAAA GCC-CCATACCCAGGCCGCCCGC ATG ACGCGCGGCCTGCCTACGGAGGC GTTCGCCCAATGCTG TERM 3008 4024271 - 4024227 - f 79 -14.9 -2.91276 | overlap 4024226 GGGGCTCGTAGAAAG CCCCATACCCAGGCCGCCCGC ATG ACGCGCGGCCTGCCTACGGAG GCGTTCGCCCAATGC TERM 3009 4024768 - 4024747 - g 72 -8.7 -4.12902 | gap 1, overlap 4024726 4024727 4024748 CAAGTACCCGGAAAA GCGCGGCCAG GAC CTGGCCAC-C ACCCGCCGCGCCTGC Pmen_3646 4024283 - 4025179 + | phospholipid/glycerol acyltransferase Pmen_3647 4027342 - 4025195 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Pmen_3648 4031100 - 4027387 - | multi-sensor hybrid histidine kinase TERM 3010 4029386 - 4029398 + g 73 -9.1 -3.91084 | ATATCGATGATCACC GCCTG CAC CAGGC TTTCGTTGCCGCTGC TERM 3011 4030294 - 4030265 - G 77 -13.5 -3.5594 | gap 1 AACTGACTGCTGAAA CGCGGCACCCAGCC ATT GGCCGGG-GCCTCG CCACGCAGCAGTTCA TERM 3012 4031305 - 4031322 + r 79 -12.7 -3.51411 | opp_overlap 4031305, overlap 4031301 AACGGGCAGAAAAAA GCCCTCG CAAG CGAGGGC TTCGTTTCAGCGAAT TERM 3013 4031322 - 4031305 - R 100 -12.7 -5.25803 | opp_overlap 4031305 4031301 AACGGGCAGAAAAAA GCCCTCG CAAG CGAGGGC TTCGTTTCAGCGAAT Pmen_3649 4032001 - 4031345 - | OmpA/MotB domain-containing protein TERM 3014 4032158 - 4032126 - R 71 -5.4 -4.33417 | opp_overlap 4032149 4032150, overlap 4032128 GCGATCCAGAACAAA TCCCGGAAGTGCGG GCTTA CTGCACGCCCGGCA GGGGGCGCAGGGTGA Pmen_3650 4032810 - 4032142 - | OmpA/MotB domain-containing protein Pmen_3651 4033518 - 4032871 - | beta-lactamase domain-containing protein Pmen_3652 4034540 - 4033518 - | AraC family transcriptional regulator Pmen_3653 4034635 - 4035489 + | metal-dependent hydrolase-like protein TERM 3015 4035511 - 4035530 + F 70 -12.1 -2.89881 | TTTCCGCAGGATTAT GCGCCGC ATTCGG GCGGCGC TATCTACCCTGGATG TERM 3016 4035614 - 4035567 - f 84 -11.2 -4.03234 | gap 1, opp_overlap 4035579, overlap 4035569 GTGCCCGCACACAAA CAGCGGCGAACAGCTGGTGCGCA TCG CGCACCCCATCTCCTCGCCGC-G CCCGTCACCTATCCC TERM 3017 4035613 - 4035569 - f 90 -14.9 -3.61232 | opp_overlap 4035579, overlap 4035567 GCCCGCACACAAACA GCGGCGAACAGCTGGTGCGCA TCG CGCACCCCATCTCCTCGCCGC GCCCGTCACCTATCC TERM 3018 4036086 - 4036071 - g 70 -11.8 -3.36327 | CGAGCGCATGGAGAA GCGCGC CCGC GCGCGC ATCCGCTACACCCAG Pmen_3654 4035754 - 4036599 + | metal-dependent hydrolase-like protein TERM 3019 4036690 - 4036674 - T 70 -10.8 -3.48276 | overlap 4036685 TCCTGCCGCAGACAA GGCGGG AGCAA CCCGCC GAATCGGCGCCCGAC Pmen_3655 4037653 - 4036715 - | alpha/beta hydrolase fold Pmen_3656 4038395 - 4037724 - | TetR family transcriptional regulator Pmen_3657 4038478 - 4039338 + | hypothetical protein Pmen_3658 4042071 - 4039327 - | regulatory protein, LuxR TERM 3020 4042187 - 4042171 - R 100 -10.8 -4.8622 | opp_overlap 4042171 GTCCGTAACGAAAAA GCCGGC ACAAG GCCGGC TTCGTCGTGTAACTC Pmen_3659 4043587 - 4042214 - | hypothetical protein TERM 3021 4043392 - 4043369 - G 81 -8.1 -4.58395 | gap 1, opp_overlap 4043368, overlap 4043373 CGGATCGGCCAAAAA GCCA-CGCGG ATCGA CCGCGCCGGC ATTGGTCGGCAGGCC Pmen_3660 4045593 - 4043614 - | hypothetical protein Pmen_3661 4047490 - 4045808 - | acyl-CoA synthetase TERM 3022 4047583 - 4047596 + H 72 -2.3 -4.7254 | overlap 4047577 GAATGATTTGCCATG TGACC CTAT GGCCA TTTTTGGTCACAGGT Pmen_3662 4047681 - 4048856 + | acetyl-CoA acetyltransferase TERM 3023 4048860 - 4048909 + T 93 -16.3 -3.64703 | opp_overlap 4048861 4048874 4048876, overlap 4048869 GAACTGCTGTAAGCC AGCCCATCACCCAAGAGCCCCGC AGTT GCGGGGCTCTTGGGTTTAGCGCA TTTCGCTCAGCGCCA TERM 3024 4048908 - 4048861 - T 88 -19.8 -2.52795 | opp_overlap 4048860 4048869, overlap 4048874 4048876 AACTGCTGTAAGCCA GCCCATCACCCAAGAGCCCCGC AGTT GCGGGGCTCTTGGGTTTAGCGC ATTTCGCTCAGCGCC TERM 3025 4048869 - 4048900 + T 100 -26 -3.5936 | opp_overlap 4048861 4048874 4048876, overlap 4048860 TAAGCCAGCCCATCA CCCAAGAGCCCCGC AGTT GCGGGGCTCTTGGG TTTAGCGCATTTCGC TERM 3026 4048895 - 4048874 - T 87 -17.3 -3.09834 | opp_overlap 4048869 4048860, overlap 4048861 4048876 CAGCCCATCACCCAA GAGCCCCGC AGTT GCGGGGCTC TTGGGTTTAGCGCAT TERM 3027 4048893 - 4048876 - T 76 -14.1 -3.10796 | opp_overlap 4048869 4048860, overlap 4048874 4048861 GCCCATCACCCAAGA GCCCCGC AGTT GCGGGGC TCTTGGGTTTAGCGC Pmen_3663 4049531 - 4048902 - | lysine exporter protein LysE/YggA TERM 3028 4049082 - 4049069 - G 75 -9.5 -4.04206 | CCAGCGCCAGATAAA GGCCG TAAC CGGCC TGGACCGCCACTGGC Pmen_3664 4049611 - 4050576 + | glycerate dehydrogenase TERM 3029 4051646 - 4051664 + G 72 -6.7 -4.16943 | gap 1, overlap 4051629 TCGGCCCTTGCCGCA CCCT-GGC CGAG GCCGAGGG TTTTCGCATCTACAG Pmen_3665 4050697 - 4051692 + | 16S rRNA m(2)G 1207 methyltransferase TERM 3030 4051908 - 4051855 - f 89 -16.4 -3.28712 | gap 3, opp_overlap 4051866 4051885, overlap 4051857 4051858 CCTGCGGTTTGACAA GACCTATGACACGCAC-ACCTTACCCG GGG CGGG-AAGGTCGTACGTGTCATA-GCC GTGTCGACCCGCCCC TERM 3031 4051907 - 4051857 - f 90 -17.9 -3.21276 | opp_overlap 4051866 4051885, overlap 4051855 4051858 TGCGGTTTGACAAGA CCTATGACACGCAC-ACCTTACCCG GGG CGGG-AAGGTCGTACGTGTCATAGC CGTGTCGACCCGCCC TERM 3032 4051906 - 4051858 - f 100 -21.4 -2.52623 | opp_overlap 4051866 4051885, overlap 4051857 4051855 GCGGTTTGACAAGAC CTATGACACGCAC-ACCTTACCCG GGG CGGG-AAGGTCGTACGTGTCATAG CCGTGTCGACCCGCC Pmen_3666 4051937 - 4052521 + | hypothetical protein Pmen_3667 4052631 - 4053074 + | hypothetical protein TERM 3033 4053118 - 4053077 - T 90 -14.3 -3.53091 | opp_overlap 4053080, overlap 4053078 AGCCCTGCCCTGAAA CGCCGACGGCGCGTCGTGA GTGC TCACGCCGCGCCGTCGTTC TGCTGCCGAGACCTG TERM 3034 4053117 - 4053078 - T 86 -17.8 -2.71712 | opp_overlap 4053080, overlap 4053077 GCCCTGCCCTGAAAC GCCGACGGCGCGTCGTGA GTGC TCACGCCGCGCCGTCGTT CTGCTGCCGAGACCT TERM 3035 4053080 - 4053115 + T 100 -24.8 -3.40403 | opp_overlap 4053078 4053077 CCTGCCCTGAAACGC CGACGGCGCGTCGTGA GTGC TCACGCCGCGCCGTCG TTCTGCTGCCGAGAC Pmen_3668 4053958 - 4053137 - | peptidase M48, Ste24p TERM 3036 4053716 - 4053687 - G 74 -7.9 -4.26076 | gap 2, overlap 4053706 GCATCCGGACGAAAA CGCGG-G-GCCTG GGGAAT CAGGCGCGCCGCG ACGGCCTGCAGGCGC Pmen_3669 4054154 - 4056304 + | methyl-accepting chemotaxis sensory transducer Pmen_3670 4057009 - 4056392 - | hypothetical protein Pmen_3671 4057300 - 4057040 - | hypothetical protein TERM 3037 4057645 - 4057665 + G 77 -11.1 -3.86194 | opp_overlap 4057627 4057628 CGCCCCGTTCTGGCG CGCCTGCTC GCC GACCAGGCG TTTCTCGGCACCCTT Pmen_3672 4057582 - 4058745 + | phospholipid/glycerol acyltransferase TERM 3038 4058791 - 4058761 - T 100 -20.6 -3.85698 | opp_overlap 4058761 4058762 4058767, overlap 4058762 4058767 GCCCTGCGGCAGAAA CGAAAACGGCAGCC CAT GGCTGCCGTTTTCA TTGATTCATCCGTGA TERM 3039 4058761 - 4058791 + T 95 -18.4 -3.40867 | opp_overlap 4058761 4058762 4058767, overlap 4058762 4058767 GCCCTGCGGCAGAAA CGAAAACGGCAGCC CAT GGCTGCCGTTTTCA TTGATTCATCCGTGA TERM 3040 4058762 - 4058790 + T 100 -21.9 -2.64199 | opp_overlap 4058761 4058762 4058767, overlap 4058761 4058767 CCCTGCGGCAGAAAC GAAAACGGCAGCC CAT GGCTGCCGTTTTC ATTGATTCATCCGTG TERM 3041 4058790 - 4058762 - T 100 -21.9 -2.91276 | opp_overlap 4058762 4058761 4058767, overlap 4058761 4058767 CCCTGCGGCAGAAAC GAAAACGGCAGCC CAT GGCTGCCGTTTTC ATTGATTCATCCGTG TERM 3042 4058785 - 4058767 - T 100 -16 -4.61873 | opp_overlap 4058767 4058762 4058761, overlap 4058762 4058761 CGGCAGAAACGAAAA CGGCAGCC CAT GGCTGCCG TTTTCATTGATTCAT TERM 3043 4058767 - 4058785 + T 100 -16 -4.50193 | opp_overlap 4058762 4058761 4058767, overlap 4058762 4058761 CGGCAGAAACGAAAA CGGCAGCC CAT GGCTGCCG TTTTCATTGATTCAT Pmen_3673 4059082 - 4058807 - | hypothetical protein Pmen_3674 4059357 - 4059563 + | hypothetical protein TERM 3044 4059607 - 4059579 - T 85 -17.5 -2.91276 | opp_overlap 4059584, overlap 4059584 GGCTCCCGCACAAAC GAAAACGCCCCGC ATT GCGGGGCGTTTTG CTATCTGCAGCGTTA TERM 3045 4059584 - 4059602 + T 100 -17.4 -4.39166 | opp_overlap 4059579 4059584 CCGCACAAACGAAAA CGCCCCGC ATT GCGGGGCG TTTTGCTATCTGCAG TERM 3046 4059602 - 4059584 - T 100 -17.4 -4.61873 | opp_overlap 4059584, overlap 4059579 CCGCACAAACGAAAA CGCCCCGC ATT GCGGGGCG TTTTGCTATCTGCAG Pmen_3675 4060204 - 4059620 - | hypothetical protein Pmen_3676 4060372 - 4060599 + | hypothetical protein TERM 3047 4061018 - 4061028 + F 76 -5.4 -4.63218 | CCATGCGGCCGCCAA TCTG GTG CAGA TTTTCTTGGAGAGAG Pmen_3677 4061048 - 4062544 + | malate:quinone oxidoreductase TERM 3048 4062563 - 4062578 + T 100 -11.8 -5.28176 | opp_overlap 4062563 CCACGCATAAAAAAA CCGCCC CTCG GGGCGG TTTTTTATGCGTAGG TERM 3049 4062578 - 4062563 - T 100 -11.8 -5.64274 | opp_overlap 4062563 CCACGCATAAAAAAA CCGCCC CTCG GGGCGG TTTTTTATGCGTAGG Pmen_3678 4063106 - 4062648 - | CreA family protein Pmen_3679 4064234 - 4063116 - | gamma-glutamyl kinase TERM 3050 4064303 - 4064286 - R 100 -9.8 -4.87665 | CCCCACCTACAAAAA CGCCGC AATTAA GCGGCG TTGGAAATTTGCTTA obgE 4065536 - 4064316 - | GTPase ObgE TERM 3051 4065042 - 4065065 + g 71 -9.4 -3.75897 | GGCATTGGGCAGACC GAGCAGGCCG ACGT CGGCCAGCAC TTTCAGTTCCAGCTT TERM 3052 4065675 - 4065665 - R 100 -4.6 -6.28967 | opp_overlap 4065674 CAGAAACAAAAAAAA CGCC TGG AGCG TTTTTTAACGTCGCT TERM 3053 4065759 - 4065739 - R 100 -14.7 -5.4505 | opp_overlap 4065739 CGGGCCAATAAAAAA GCCCCGTCC TAC GGACAGGGC TTTTCCAGCGCGCAG TERM 3054 4065739 - 4065759 + r 89 -12.5 -4.07568 | opp_overlap 4065739 CGGGCCAATAAAAAA GCCCCGTCC TAC GGACAGGGC TTTTCCAGCGCGCAG rpmA 4066036 - 4065779 - | 50S ribosomal protein L27 Pmen_3682 4066385 - 4066074 - | 50S ribosomal protein L21P Pmen_3683 4066632 - 4067600 + | polyprenyl synthetase TERM 3055 4067718 - 4067685 - T 93 -16.2 -3.58522 | gap 1, opp_overlap 4067691, overlap 4067691 ACCAGCAGCCGGAAA CG-AAAACGCCCCGA AGCAG TCGGGGCGTTTTGCG TTCAGGCGCAGCCGA TERM 3056 4067691 - 4067711 + T 100 -14 -4.27316 | opp_overlap 4067685 4067691 AGCCGGAAACGAAAA CGCCCCGA AGCAG TCGGGGCG TTTTGCGTTCAGGCG TERM 3057 4067711 - 4067691 - T 100 -14 -4.55128 | opp_overlap 4067691, overlap 4067685 AGCCGGAAACGAAAA CGCCCCGA AGCAG TCGGGGCG TTTTGCGTTCAGGCG fabG 4068492 - 4067734 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 3058 4068355 - 4068369 + g 75 -3.4 -4.81083 | overlap 4068331 4068357 TGCCTTGCAGGCGGC CACGGC TTC GTCGAG TTTTTCCTGGTTCAG Pmen_3685 4068601 - 4069335 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding fxsA 4069403 - 4069852 + | FxsA TERM 3059 4069872 - 4069916 + F 100 -24.3 -3.40403 | overlap 4069873 CAAGCACCTGTAGGA GCCGGCTTGCCGGCGATCTCC CTG GCTGATCGCCGGCAAGCCGGG TTCTACTCAAGCGCA TERM 3060 4069873 - 4069915 + F 100 -27.8 -2.64099 | overlap 4069872 AAGCACCTGTAGGAG CCGGCTTGCCGGCGATCTCC CTG GCTGATCGCCGGCAAGCCGG GTTCTACTCAAGCGC groES 4070173 - 4070466 + | co-chaperonin GroES TERM 3061 4071530 - 4071496 - g 77 -13.6 -3.61398 | CGTCGTGCTGAACAA GGACAACACCACCATC ATC GATGGTGCTGGTGCCC AGGCCGACATCGAAG groEL 4070516 - 4072162 + | chaperonin GroEL TERM 3062 4072210 - 4072192 - f 85 -13.1 -3.75292 | opp_overlap 4072192 ACGCAGTACGAAGAA CCCCGCG CTAGT CGCGGGG TTTTTTTATGCGCGG TERM 3063 4072192 - 4072210 + F 100 -13.1 -5.60993 | opp_overlap 4072192 ACGCAGTACGAAGAA CCCCGCG CTAGT CGCGGGG TTTTTTTATGCGCGG TERM 3064 4072296 - 4072306 + F 71 -8.2 -4.13911 | ACTTGAGGGTGGACT CGGG CAC CCCG TTTGCTTATGTTTTG TERM 3065 4073042 - 4073060 + G 78 -10.2 -4.07568 | opp_overlap 4073040 GACTGGCAACAACTG CTGCACGG CTA CCGCGCAG TTTTCGCCGAGGGCG Pmen_3689 4072400 - 4073104 + | Mn2+-dependent serine/threonine protein kinase Pmen_3690 4073464 - 4073700 + | hypothetical protein TERM 3066 4074309 - 4074279 - g 85 -13.2 -4.1399 | TCATCTATACAGAAA TTCTTCGCGCCGGC GCG GCCGGCGCAACGGA AGAACTGCCTAGCAA Pmen_3691 4073834 - 4074652 + | hypothetical protein Pmen_3692 4074719 - 4075807 + | hypothetical protein Pmen_3693 4077118 - 4076291 - | N-hydroxyarylamine O-acetyltransferase TERM 3067 4077199 - 4077218 + r 71 -9.2 -3.72695 | opp_overlap 4077199 GGCCGATAGCAAAAA GGCCGATC TTGC GACCGGCC TTTCGTGCAACGCCT TERM 3068 4077218 - 4077199 - R 100 -11.4 -4.8048 | opp_overlap 4077199 GGCCGATAGCAAAAA GGCCGATC TTGC GACCGGCC TTTCGTGCAACGCCT Pmen_3694 4078738 - 4077242 - | methylmalonate-semialdehyde dehydrogenase [acylating] Pmen_3695 4080173 - 4078827 - | beta alanine--pyruvate transaminase Pmen_3696 4080338 - 4081255 + | LysR family transcriptional regulator TERM 3069 4081502 - 4081519 + F 70 -3.3 -4.66833 | CAATCTCCCGCACAA GCTGATC AGTT GGACAGC TTTTTGCACTTGAGC Pmen_3697 4081593 - 4082393 + | nucleoside-binding outer membrane protein-like protein TERM 3070 4082401 - 4082427 + F 89 -12.3 -4.08692 | gap 1 ATTTCTGACCCACGG CGCCCGACCGGC ACAG GCTGGTCGG-CG TTTTGCAGCCACTTC Pmen_3698 4082467 - 4083843 + | uracil-xanthine permease TERM 3071 4084424 - 4084440 + G 74 -15.1 -3.02511 | CTACCTGGACTGGTT CCGCGGC CGC GCCGCGG TGTTCGACGCCTGGA Pmen_3699 4084002 - 4084664 + | TetR family transcriptional regulator Pmen_3700 4084664 - 4085248 + | hypothetical protein Pmen_3701 4085245 - 4085802 + | hypothetical protein Pmen_3702 4085848 - 4086531 + | short chain dehydrogenase Pmen_3703 4087144 - 4086647 - | hypothetical protein TERM 3072 4086901 - 4086866 - G 100 -19.7 -3.62046 | opp_overlap 4086868 CCAGGTGGCGAACAA CAGGCGACCGGCCGC GTCATA GCGGCCGAACGCCTG TTGCGGATCGCGGAT TERM 3073 4086868 - 4086899 + g 72 -14.3 -3.04144 | opp_overlap 4086866 AGGTGGCGAACAACA GGCGACCGGCCGC GTCATA GCGGCCGAACGCC TGTTGCGGATCGCGG Pmen_3704 4087227 - 4087577 + | MerR family transcriptional regulator Pmen_3705 4087704 - 4089059 + | hydroxydechloroatrazine ethylaminohydrolase TERM 3074 4089109 - 4089076 - f 74 -12.3 -3.12668 | opp_overlap 4089081 CATCGGGACAGGCAA CGCCACCCGCCGACC GCCT GGTTGGCGGGTTTCG CCCGTCCTACGGGTT TERM 3075 4089081 - 4089104 + F 93 -16 -3.56092 | opp_overlap 4089076 GGACAGGCAACGCCA CCCGCCGACC GCCT GGTTGGCGGG TTTCGCCCGTCCTAC Pmen_3706 4089164 - 4090111 + | adenosine deaminase TERM 3076 4090105 - 4090087 - T 86 -14.6 -3.28791 | ACGCCTGGCGCAGAA CAGCCTGG ACG CCAGGCTG GCCTGAGGCCGGATG Pmen_3707 4090717 - 4090235 - | hypothetical protein TERM 3077 4090761 - 4090792 + r 82 -14.5 -3.18728 | opp_overlap 4090761 4090762, overlap 4090762 GTAGCCTGAATGAAA C-CGGCGCCAGCGGC CAGG GCCG-TGGCGCCGTG TTGAATCTTGCAGCT TERM 3078 4090791 - 4090761 - R 93 -14.7 -3.91084 | gap 1, opp_overlap 4090761 4090762, overlap 4090762 GTAGCCTGAATGAAA CCGGCGCCAGCGGC CAGG GCCG-TGGCGCCGT GTTGAATCTTGCAGC TERM 3079 4090762 - 4090790 + r 90 -18.2 -3.15503 | gap 1, opp_overlap 4090761 4090762, overlap 4090761 TAGCCTGAATGAAAC CGGCGCCAGCGGC CAGG GCCG-TGGCGCCG TGTTGAATCTTGCAG TERM 3080 4090790 - 4090762 - R 86 -18.2 -2.94329 | gap 1, opp_overlap 4090762 4090761, overlap 4090761 TAGCCTGAATGAAAC CGGCGCCAGCGGC CAGG GCCG-TGGCGCCG TGTTGAATCTTGCAG Pmen_3708 4092308 - 4090878 - | hypothetical protein Pmen_3709 4094350 - 4092305 - | TonB-dependent receptor Pmen_3710 4094861 - 4094475 - | hypothetical protein Pmen_3711 4095880 - 4094966 - | LysR family transcriptional regulator Pmen_3712 4095997 - 4097013 + | alcohol dehydrogenase TERM 3081 4097402 - 4097373 - g 77 -16.4 -2.78384 | overlap 4097375 CCTGCGTGCACCACA CAGCCTGCCCGC GCAACG GCGGGCGGGCTG ACCGCGATGTCCGTA Pmen_3713 4097230 - 4097403 + | hypothetical protein Pmen_3714 4098221 - 4097583 - | TetR family transcriptional regulator TERM 3082 4098839 - 4098782 - g 78 -14.7 -3.28712 | gap 1, overlap 4098765 4098764 GCTGGTGGCCGACAA GGCGGTCAGCCAACAGGCTTACGACGAG GCG CGCGCCGCCGGCCTGCAGGCCGAC-GCC GCGCTGGAGCAGGCG Pmen_3715 4098402 - 4099550 + | RND family efflux transporter MFP subunit TERM 3083 4101638 - 4101665 + G 70 -6.2 -4.20918 | gap 1, opp_overlap 4101631 4101630, overlap 4101639 AGGAGAATGGCGTGG CGGCGCTGGCGCA ACG TGCGC-AGCGACA TTTCTTCAGCTTCCG Pmen_3716 4099708 - 4102851 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pmen_3717 4102848 - 4104281 + | RND efflux system outer membrane lipoprotein TERM 3084 4104323 - 4104347 + T 100 -20.7 -5.55664 | overlap 4104320 CCTTACCCCACGCGC CGCCCCCGCCG TCT TGGCGGGGGCG TTTTTTTGCTACTGG Pmen_3718 4105003 - 4104410 - | HAD family hydrolase Pmen_3719 4105869 - 4105000 - | acyl-CoA thioesterase II Pmen_3720 4107472 - 4105850 - | hypothetical protein TERM 3085 4107037 - 4106997 - G 81 -8.3 -4.4648 | overlap 4106998 AGCCCCAGGAGAAAA CCACC-GGGCGGCAGGCTG CTCGC CAGC-TGCCGGCCAAGCGG CGCGGGCAGCTCGCT Pmen_3721 4108029 - 4107469 - | GCN5-related N-acetyltransferase Pmen_3722 4108088 - 4109008 + | histone deacetylase superfamily protein Pmen_3723 4110142 - 4109012 - | aminotransferase, class V Pmen_3724 4110256 - 4111497 + | hypothetical protein Pmen_3725 4111679 - 4112680 + | CheC, inhibitor of MCP methylation Pmen_3726 4112685 - 4113122 + | putative PAS/PAC sensor protein Pmen_3727 4113215 - 4113577 + | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_3728 4114964 - 4113621 - | DEAD/DEAH box helicase domain-containing protein TERM 3086 4114487 - 4114539 + g 73 -13.3 -3.31144 | overlap 4114488 AGCCCAGATCGAGCA TGCGGTCGGCCTCGTCCAGCACCAG GGT CTGCAGCTGGGCGAACTTGACCGCG TTCTGCCGGTACAGG TERM 3087 4114488 - 4114538 + g 71 -14.6 -2.58544 | overlap 4114487 GCCCAGATCGAGCAT GCGGTCGGCCTCGTCCAGCACCAG GGT CTGCAGCTGGGCGAACTTGACCGC GTTCTGCCGGTACAG Pmen_3729 4115689 - 4115090 - | DNA polymerase III, epsilon subunit TERM 3088 4115530 - 4115571 + g 80 -17.3 -2.79183 | opp_overlap 4115540, overlap 4115540 TGATGCCGGTGAGCT GCTCGATGAACGGCGGCAC CCAG GCGCCGCTGTTCATCAGGC TCTGGTAACGGTCGA Pmen_3730 4116176 - 4115697 - | hypothetical protein Pmen_3731 4116278 - 4116763 + | YbaK/prolyl-tRNA synthetase associated region Pmen_3732 4116825 - 4117490 + | hypothetical protein Pmen_3733 4117525 - 4117962 + | glyoxalase/bleomycin resistance protein/dioxygenase Pmen_3734 4118713 - 4117970 - | extracellular solute-binding protein Pmen_3735 4119558 - 4118713 - | short chain dehydrogenase TERM 3089 4118812 - 4118791 - G 79 -12.9 -3.62522 | overlap 4118780 CAACCGCGGGAAGAA GCGCGCCAG CACC CGGGCGCGC CAGTCGACGTTGGAC Pmen_3736 4119919 - 4121007 + | endonuclease/exonuclease/phosphatase Pmen_3737 4121101 - 4121835 + | hypothetical protein Pmen_3738 4122646 - 4121840 - | redoxin domain-containing protein TERM 3090 4122130 - 4122079 - G 72 -15.2 -2.77999 | gap 2, overlap 4122074 4122076 GATTGACGAACAGCA CGCG-GATGCCGGC-CTCGCGCTG CTGCGC CTGCGCCAGCACCGGCATCTCGCG ACGGCACGGCGGGCA Pmen_3739 4125188 - 4122654 - | ATP-dependent helicase HrpB TERM 3091 4122887 - 4122915 + g 74 -7.9 -4.24948 | opp_overlap 4122884, overlap 4122912 CCAGACCGAACAGCT CCTGCAGGCGCAC GGC GAGCACCGGCGGG TTTTCCGTGTAGTCG TERM 3092 4123743 - 4123759 + g 72 -11.5 -3.55444 | CACGCCGCCTTGAGC GCTGCGC GTG GCGCGGC TTTCGCCGCTGAGCA Pmen_3740 4125320 - 4125739 + | hypothetical protein TERM 3093 4125955 - 4125991 + G 74 -12.1 -3.53091 | overlap 4125956 4125966 4125981 CGGCCGACGAGGACC ACCGCTACGGCCATGGC AAG GCCGAGGCCCTGGCGGG TTTGGGCCAGGCGCT TERM 3094 4125956 - 4125990 + G 75 -15.6 -2.71712 | overlap 4125955 4125966 4125981 GGCCGACGAGGACCA CCGCTACGGCCATGGC AAG GCCGAGGCCCTGGCGG GTTTGGGCCAGGCGC Pmen_3741 4125744 - 4126622 + | cation diffusion facilitator family transporter TERM 3095 4126706 - 4126691 - f 100 -11.8 -5.26316 | GCAGGCCATAAAAAA GGGGCC TTGC GGCCCC CTCGGGGAATCTGTC Pmen_3742 4126993 - 4127472 + | AsnC family transcriptional regulator TERM 3096 4127511 - 4127535 + F 100 -9.9 -5.08824 | opp_overlap 4127511 4127513, overlap 4127499 TGCCGCGGTCCAAGA CAGGGCGCGTA TAA TCCCCGCCCTG TTTTTTCCGTCCGAA Pmen_3743 4127563 - 4127781 + | hypothetical protein Pmen_3744 4127862 - 4128254 + | globin Pmen_3745 4129080 - 4128460 - | ribosomal large subunit pseudouridine synthase E Pmen_3746 4129205 - 4130236 + | alcohol dehydrogenase TERM 3097 4130273 - 4130239 - f 76 -13.6 -3.03701 | gap 1, opp_overlap 4130234, overlap 4130234 CGCCAGCAAATGACA GCACGGGCGCGGAGC TGGCAT GCTCTGCGCCC-TGC CTGATCCCTGATCCC Pmen_3747 4130291 - 4130743 + | GCN5-related N-acetyltransferase Pmen_3748 4132131 - 4130740 - | GntR family transcriptional regulator TERM 3098 4131177 - 4131161 - G 72 -5.7 -4.36914 | opp_overlap 4131132 GCGCCGGCGATAAAA CCCAGGC GCA GTCCGGG CGCGACGCTTTTGGA TERM 3099 4133127 - 4133077 - g 72 -13.9 -3.02144 | gap 1, overlap 4133118 TCAGCGGTGCCAATA TCGACCGCCGCGCCCTGGCCGAGC TGTT ACTCGACGAGGAAGCGGCGG-CGG CCTGATCAGCGAAAC Pmen_3749 4132161 - 4133132 + | hypothetical protein Pmen_3750 4134605 - 4133133 - | AMP nucleosidase Pmen_3751 4134739 - 4135476 + | hypothetical protein Pmen_3752 4136170 - 4135487 - | hypothetical protein TERM 3100 4136651 - 4136627 - H 71 -7.8 -4.01888 | ACTTCATATTACAAA GCGAGCGTAG TATTT CTGCACTCGC GCCGGCCTCTGCCCA Pmen_3753 4136707 - 4137450 + | carbonate dehydratase TERM 3101 4137461 - 4137482 + T 86 -15.1 -3.33815 | ACTGACCCCCGTTAT GCGCCGGCT GAAT GGCCGGCGC TTCGTTACACCCGCT TERM 3102 4138679 - 4138644 - T 78 -14 -3.1552 | gap 1, opp_overlap 4138605, overlap 4138642 GCTGACCGACGAAGA CGCCGACGCCAGCGG TTCATCC CCGCTGGCG-CGGGG AACACTTGCAGCCCG TERM 3103 4139731 - 4139749 + T 91 -13.8 -3.74747 | opp_overlap 4139731 CGGGGAACACAAAAA GCCCGGCT CCG GGCCGGGC TTTCCTGACGGTTCA TERM 3104 4139749 - 4139731 - T 100 -13.1 -5.0916 | opp_overlap 4139731 CGGGGAACACAAAAA GCCCGGC TCCGG GCCGGGC TTTCCTGACGGTTCA Pmen_3754 4140213 - 4139914 - | hypothetical protein Pmen_3755 4141127 - 4140213 - | CRISPR-associated Cas1 family protein Pmen_3756 4141741 - 4141127 - | CRISPR-associated Cse3 family protein TERM 3105 4141643 - 4141614 - GR 70 -4.1 -4.55721 | gap 1 AAACGCCAGAGAAAA CGAGCCGGA-GCGC TGT GCTCATCCGTCACG AAGGCACGTGCCAGG Pmen_3757 4142378 - 4141716 - | CRISPR-associated Cas5e family protein TERM 3106 4142015 - 4141971 - GR 74 -11.4 -3.53224 | opp_overlap 4142006 CATGCCCGGCGCAAA GCTCTTGCGC-CCCAGCGCCAG CGG CCAGTGCGGGGCGCGCAAG-GC GGCGTGTATACGCGC Pmen_3758 4143535 - 4142381 - | CRISPR-associated Cse4 family protein TERM 3107 4143040 - 4143050 + g 70 -2.4 -4.67353 | overlap 4143016 TGCCACCATCGAGCA GGGC CTT GGCC TTTTTCACTACCTCG Pmen_3759 4144088 - 4143546 - | CRISPR-associated Cse2 family protein Pmen_3760 4145662 - 4144085 - | CRISPR-associated Cse1 family protein Pmen_3761 4145833 - 4146123 + | hypothetical protein Pmen_3762 4146120 - 4146401 + | addiction module antitoxin Pmen_3763 4149061 - 4146404 - | CRISPR-associated helicase Cas3 family protein protein TERM 3108 4149802 - 4149820 + r 91 -13.8 -3.74747 | opp_overlap 4149802 CGGGGAACACAAAAA GCCCGGCT CCG GGCCGGGC TTTCCTGACGGTTCA TERM 3109 4149820 - 4149802 - R 100 -13.1 -5.0916 | opp_overlap 4149802 CGGGGAACACAAAAA GCCCGGC TCCGG GCCGGGC TTTCCTGACGGTTCA TERM 3110 4149863 - 4149881 + r 91 -13.8 -3.74747 | opp_overlap 4149863 CGGGGAACACAAAAA GCCCGGCT CCG GGCCGGGC TTTCCTGACGGTTCA TERM 3111 4149881 - 4149863 - R 100 -13.1 -5.0916 | opp_overlap 4149863 CGGGGAACACAAAAA GCCCGGC TCCGG GCCGGGC TTTCCTGACGGTTCA Pmen_3764 4151896 - 4150247 - | acyl-CoA dehydrogenase domain-containing protein TERM 3112 4150406 - 4150352 - G 100 -25 -3.85698 | opp_overlap 4150353 4150393 GCGGCTGGCGATAAA GGCGTCGCTGACCACGCTGTTGCCGG CCT CCAGCAACAGCTTGGCCTGCAGCGCC ACGGCCATGTCCTCG TERM 3113 4151299 - 4151330 + g 70 -10.8 -3.55824 | overlap 4151296 CGATGGGATAGGCAC GGGTGGTATTGGCG CGCA CGTCGGTGCCGCCC TGTTTCTCGGTCATG TERM 3114 4151545 - 4151533 - G 74 -10.5 -3.88498 | overlap 4151534 TGTGCAGATAGGAAA GCCCG GCG CGGGC GACATGGGCACCGGC Pmen_3765 4152534 - 4151893 - | TetR family transcriptional regulator Pmen_3766 4155080 - 4152672 - | integral membrane sensor hybrid histidine kinase TERM 3115 4153681 - 4153702 + g 72 -4.3 -4.49311 | gap 1, overlap 4153680 4153686 ACCATGCGCATCATG TCG-CGCGCC GAG GCCGCGGCGG TTTTCTGATACTGCT Pmen_3767 4156208 - 4155318 - | periplasmic binding protein Pmen_3768 4158181 - 4156205 - | iron-hydroxamate transporter permease subunit Pmen_3769 4158951 - 4158184 - | ABC transporter related TERM 3116 4158663 - 4158653 - G 72 -6.8 -4.18018 | CCGCGCCAGGGAAAA CGTC CCA GACG CACCAGCTCACGCAC Pmen_3770 4159691 - 4158945 - | hypothetical protein Pmen_3771 4160942 - 4159782 - | major facilitator transporter Pmen_3772 4161086 - 4161883 + | phosphomethylpyrimidine kinase thiE 4161880 - 4162509 + | thiamine-phosphate pyrophosphorylase Pmen_3774 4162532 - 4163821 + | glutamate-1-semialdehyde aminotransferase Pmen_3775 4163821 - 4164453 + | hypothetical protein TERM 3117 4164522 - 4164488 - f 72 -11.4 -3.32844 | gap 1 CGGTTTACTCCATAA TGCGACGGCCGGCAC GATTTT GCGCCGGCCGG-GCA TGCCACCCGCTCCGA Pmen_3776 4164561 - 4165109 + | Sel1 domain-containing protein TERM 3118 4165113 - 4165171 + T 100 -25.5 -2.6006 | gap 2, opp_overlap 4165147 4165148, overlap 4165114 CCCTTGCCCTGACCC -GTAGGGTGCGCCGTGCGCACCA-CTGAC GTG GAAAGCTGGTGCGCGCGGCGCACCCTACG ATTCTGCGCTCACTT TERM 3119 4165114 - 4165172 + T 72 -11.2 -3.33969 | gap 4, opp_overlap 4165147 4165148, overlap 4165113 CCTTGCCCTGACCCG ---TAGGGTGCGCCGTGCGCACCA-CTGAC GTG GAAAGCTGGTGCGCGCGGCGCACCCTACGA TTCTGCGCTCACTTG Pmen_3777 4165504 - 4165181 - | hypothetical protein TERM 3120 4165566 - 4165527 - H 78 -4.8 -4.77157 | gap 1, overlap 4165543 4165548 CGAAGTCAGGAAAAA CGGGGCGCGCAGGATAGCA CAG CGCCG-CATGCGCAGCCCG GATGCAATCCGGGGA Pmen_3778 4165636 - 4166460 + | hypothetical protein TERM 3121 4167598 - 4167609 + G 74 -5.8 -4.52781 | overlap 4167581 4167590 AAGCTGATCGAGGAC GTCG GCTT CGAC TTTTCCTTCTCCTTC Pmen_3779 4166581 - 4167960 + | tRNA-i(6)A37 thiotransferase enzyme MiaB Pmen_3780 4167987 - 4169039 + | PhoH family protein Pmen_3781 4169032 - 4169487 + | putative metalloprotease Pmen_3782 4169519 - 4170358 + | CBS domain-containing protein TERM 3122 4170368 - 4170396 + F 83 -15.4 -3.05816 | gap 1 CGCTGACGGCTGGCC TCCGGGGACGGCT GGCG AGCC-TCCCCGGA TTGCATCCGGGCTAC lnt 4170474 - 4171997 + | apolipoprotein N-acyltransferase Pmen_3784 4172922 - 4172152 - | hypothetical protein Pmen_3785 4173374 - 4172946 - | hypothetical protein TERM 3123 4173471 - 4173458 - g 71 -9.5 -3.86346 | opp_overlap 4173460 4173461 GGATGCCGCGACAAA CGGCG TGCG CGCCG CAATCTGGGTTTCCC TERM 3124 4174483 - 4174468 - g 75 -6.8 -4.33819 | gap 1, opp_overlap 4174471, overlap 4174470 ACCATGGAGAAGAAA GGCCTGG CCA CC-GGCC AGTTCGTCATTCATC TERM 3125 4175811 - 4175796 - g 72 -8.2 -4.08692 | GAACGTGCTGGAAAA GGCCGC CACC GCGACC GAACAGGACCGCGCG leuS 4173445 - 4176165 + | leucyl-tRNA synthetase TERM 3126 4176198 - 4176171 - f 72 -14.1 -2.52933 | overlap 4176170 CGCCAACTGATTAAG CTCGGCGCCAC CGCGAC GTGGCGCCGCG ATCCGCCAAGGGGAT TERM 3127 4176409 - 4176390 - g 70 -6.4 -4.17048 | CGTGCTGGAAAACAA CGGCGT TCGCGTTC ACGCCG GCGCCCCCTACAAGC Pmen_3787 4176220 - 4176831 + | rare lipoprotein B TERM 3128 4176863 - 4176833 - f 74 -11.1 -3.53012 | gap 1 TGCCGTCCCGCTAAA GGCCCAGGGGCCGC ATCC GCGGCCC-TATGCC TCCGTCCAGATGACC holA 4176887 - 4177915 + | DNA polymerase III subunit delta TERM 3129 4178162 - 4178150 - g 85 -10.5 -4.2704 | overlap 4178159 CGCATGAGCAAGAAA GCCGC AAA GCGGC CGAACAAGGCCAAAT TERM 3130 4178249 - 4178274 + G 90 -17.7 -3.61244 | overlap 4178252 GGCAGCTACCGCCGC GAAGCCTCCCA CAAC TGGGAGGCTTC TTGCTTTATGGGGTA TERM 3131 4178252 - 4178271 + G 84 -13.6 -3.93401 | overlap 4178249 AGCTACCGCCGCGAA GCCTCCCA CAAC TGGGAGGC TTCTTGCTTTATGGG Pmen_3789 4178138 - 4178332 + | hypothetical protein Pmen_3790 4178366 - 4179622 + | lytic murein transglycosylase TERM 3132 4179659 - 4179630 - f 73 -9.9 -3.59979 | gap 1, overlap 4179608 GCCGCTGACGCCAAA GCCG-CTGGCGTGG CCG CCCCGGCAGGCGGC CACCAGCCTCTCGCC Pmen_3791 4179786 - 4180838 + | lipoyl synthase TERM 3133 4180858 - 4180889 + T 100 -21.8 -3.86015 | opp_overlap 4180858 4180865, overlap 4180865 GCTCTTCACGACAAA CGAAAAAGGGACGC CGAG GCGTCCCTTTTTCG TTTCTGAGAACACTA TERM 3134 4180889 - 4180858 - T 100 -21.8 -3.96148 | opp_overlap 4180858 4180865, overlap 4180865 GCTCTTCACGACAAA CGAAAAAGGGACGC CGAG GCGTCCCTTTTTCG TTTCTGAGAACACTA TERM 3135 4180865 - 4180882 + T 100 -12.7 -5.04601 | opp_overlap 4180858 4180865, overlap 4180858 ACGACAAACGAAAAA GGGACGC CGAG GCGTCCC TTTTTCGTTTCTGAG TERM 3136 4180882 - 4180865 - T 100 -12.7 -5.05505 | opp_overlap 4180865 4180858, overlap 4180858 ACGACAAACGAAAAA GGGACGC CGAG GCGTCCC TTTTTCGTTTCTGAG Pmen_3792 4181589 - 4180972 - | lipoate-protein ligase B Pmen_3793 4181873 - 4181595 - | hypothetical protein TERM 3137 4181929 - 4181907 - R 72 -14.1 -2.52623 | opp_overlap 4181905 4181914, overlap 4181892 4181906 4181904 GCCCGTCCAGAAGAG GGCCGCCCC GGGTT GGAGCGGCC AGGTTTGATCAGTTG Pmen_3794 4183098 - 4181938 - | Serine-type D-Ala-D-Ala carboxypeptidase Pmen_3795 4184225 - 4183212 - | rare lipoprotein A Pmen_3796 4185232 - 4184222 - | lytic murein transglycosylase B Pmen_3797 4186395 - 4185250 - | rod shape-determining protein RodA Pmen_3798 4188284 - 4186392 - | peptidoglycan glycosyltransferase Pmen_3799 4188758 - 4188291 - | SPOUT methyltransferase superfamily protein Pmen_3800 4189136 - 4188768 - | iojap-like protein nadD 4189845 - 4189186 - | nicotinic acid mononucleotide adenylyltransferase proA 4191111 - 4189846 - | gamma-glutamyl phosphate reductase TERM 3138 4190534 - 4190558 + g 74 -12.1 -3.53811 | overlap 4190535 GGCATGGTGATCAGC TCACCCACCGC GGC GCGGTCGGTGG TTTCCACCACCTGCA TERM 3139 4191517 - 4191501 - H 89 -4.3 -5.24416 | overlap 4191503 TAACGACAAGAAAAA GCCGGAG TGC CTCCATC ATGCATTACCGCACC TERM 3140 4192488 - 4192439 - g 77 -9.9 -3.89614 | gap 1, overlap 4192440 CTGAAGCTGGAGAAA CGTTGCGAGCCGCGCCTGGCGCCA CGC CAGCGTCAGGCACTGCT-GCAGCA TGCCGAAGGCCGGCA Pmen_3803 4191518 - 4192747 + | alpha/beta hydrolase fold Pmen_3804 4193634 - 4192780 - | O-methyltransferase involved in polyketide biosynthesis-like protein TERM 3141 4193912 - 4193886 - g 70 -6.4 -4.1899 | opp_overlap 4193888 TTACCTGACGGAAAA GGGCAGCCATGC CTC GCTCGGCTACAC CGAGAAACGCAAGGC Pmen_3805 4193689 - 4194417 + | 3-methyladenine DNA glycosylase TERM 3142 4195049 - 4195026 - g 72 -7.3 -4.17048 | opp_overlap 4195040 4195045, overlap 4195027 CTGGCGGGAAAACAA CGCGCCAGC CTGCTC GCCGGCGGG CTCAGCCTGCTGCTG Pmen_3806 4194414 - 4195730 + | phosphoesterase, PA-phosphatase related Pmen_3807 4196324 - 4195740 - | peptidase S16, lon domain-containing protein Pmen_3808 4197048 - 4196332 - | LrgB family protein TERM 3143 4196590 - 4196569 - G 75 -13.7 -3.23216 | opp_overlap 4196582 GGTGATCATCACGAA CACCGCCGC CAGC GCGGCGATG CCGCCGATCTGCTCG Pmen_3809 4197404 - 4197045 - | LrgA family protein Pmen_3810 4197655 - 4198110 + | dehydratase Pmen_3811 4198244 - 4199977 + | MORN repeat-containing protein TERM 3144 4200203 - 4200157 - g 83 -12.2 -4.11216 | gap 1 TGCTCATCTGGAAAA CCCGGTCGGCGATCTGCAGGC CCTGCT GCC-GCAGCTCTCCGGCCAGG TCGACACCGCCTTCT Pmen_3812 4200008 - 4200649 + | NAD-dependent epimerase/dehydratase Pmen_3813 4200666 - 4201007 + | hypothetical protein Pmen_3814 4201011 - 4201622 + | methyltransferase type 11 Pmen_3815 4202386 - 4201748 - | response regulator receiver protein TERM 3145 4202031 - 4201992 - G 78 -13.7 -3.53811 | gap 3, opp_overlap 4202029 TGCACCTCGGCCAAA CGC-GGATCG-CGCCGCGGC CTG GCCG-GACGGCGATCCAGCG CCTGCTGCACGCTGT Pmen_3816 4204335 - 4202425 - | PAS/PAC sensor signal transduction histidine kinase Pmen_3817 4204477 - 4206096 + | acyl-CoA synthetase Pmen_3818 4206207 - 4207580 + | hypothetical protein TERM 3146 4209366 - 4209406 + G 78 -10.5 -4.08394 | gap 2, overlap 4209367 TGGAGGCGAGCATTC GTGC-CGGCAGCCAG-CCG CTCTA TGGTCTGGCTGCCGAGCAA TTTTGAAGACCGTGT TERM 3147 4209367 - 4209405 + G 72 -14 -3.04715 | gap 2, overlap 4209366 GGAGGCGAGCATTCG TGC-CGGCAGCCAG-CCG CTCTA TGGTCTGGCTGCCGAGCA ATTTTGAAGACCGTG Pmen_3819 4207640 - 4209412 + | acyl-CoA dehydrogenase domain-containing protein TERM 3148 4209512 - 4209463 - f 76 -12.3 -3.28712 | gap 1 GGGCCGTCCGGACAA CGTTCGGCTTCAGCCTAC-CGA CGGCAGT TCACGTGGGCTGAAGCGGAACG CCGCCCGGCCCACCC TERM 3149 4209596 - 4209617 + F 100 -18.7 -4.8622 | ACTGTTGAGCGTGTT GCGCGGCGC TTCG GCGCCGCGC TTTTTCATTCGAGCC Pmen_3820 4209667 - 4210845 + | acetyl-CoA acetyltransferase TERM 3150 4211640 - 4211600 - g 72 -6.7 -4.2828 | gap 1, opp_overlap 4211600 4211618 CCTGATCGAGGAAAA GGAGG-CGCTGCTGGCCA ACCTGG TAGCCCGCGGCGGCCGCC TGGTATTCACCCACG TERM 3151 4211709 - 4211697 - g 100 -10.5 -4.80882 | overlap 4211699 ACGCGAGACGAAAAA GGCCG CTA CGGCC TCGATGCGGCGACGA Pmen_3821 4210884 - 4211750 + | beta-lactamase domain-containing protein TERM 3152 4211767 - 4211800 + F 78 -7.5 -4.60487 | gap 1, overlap 4211772 GCTATCGGGCCTTGA CGAGCCGGTCATGC AGCGCGA GCATGGCC-GCTTG TTTTTCGCCGTGGTC Pmen_3822 4211905 - 4212384 + | YbaK/prolyl-tRNA synthetase associated region Pmen_3823 4212773 - 4212486 - | hypothetical protein Pmen_3824 4213060 - 4212770 - | hypothetical protein Pmen_3825 4213698 - 4213069 - | aromatic acid decarboxylase TERM 3153 4213213 - 4213198 - G 77 -7.5 -4.36914 | CGGCTGGTGATAAAA GCCGG GCGAAG CCGGC AGGATGGTAACGCCC Pmen_3826 4215054 - 4213699 - | UDP-N-acetylmuramate Pmen_3827 4215438 - 4215893 + | GCN5-related N-acetyltransferase Pmen_3828 4215988 - 4216815 + | hypothetical protein Pmen_3829 4216893 - 4217420 + | inorganic pyrophosphatase TERM 3154 4217440 - 4217456 + F 100 -10.8 -5.28176 | opp_overlap 4217440 4217451 TGACCACCTCCGAAA GCCGGC CACAA GCCGGC TTTTTTATGCCTGCA TERM 3155 4217456 - 4217440 - f 74 -11.5 -3.56092 | opp_overlap 4217440, overlap 4217451 TGACCACCTCCGAAA GCCGGCC ACA AGCCGGC TTTTTTATGCCTGCA Pmen_3830 4217716 - 4218750 + | hypothetical protein Pmen_3832 4219034 - 4220608 + | gamma-glutamyltransferase Pmen_3833 4220633 - 4221361 + | GntR family transcriptional regulator Pmen_3834 4222587 - 4221358 - | amidohydrolase 3 Pmen_3835 4225076 - 4222584 - | ABC transporter related TERM 3156 4223056 - 4223096 + g 70 -8.2 -3.9777 | gap 2, opp_overlap 4223040, overlap 4223057 TGTCGCCCCTCCGGC ACCAGGGCCAG-GCCG-CGC GCG GCGATGGCGCTGGCCTCGGC TTTCTCGATATTGAC TERM 3157 4223729 - 4223784 + g 86 -16.9 -3.28924 | gap 3 GCTCTTCCTGCTCGG CCGGCGGGCGCGCCA-GCGGCA-GGCCG AGC TGGCCCTGCTGCATGGC-CGCCAGCAGG TTCTCCAGCACGCTC TERM 3158 4224194 - 4224172 - G 74 -12.6 -3.53224 | overlap 4224184 CAGCGCTGCTGCAAA GCGCCGAGCA CAC CGCGCGGCGC CAGCCAGAGCACCGC Pmen_3836 4225942 - 4225073 - | inner-membrane translocator TERM 3159 4225781 - 4225753 - G 75 -9.4 -4.11216 | overlap 4225756 GCGCCAGGCTCAAAA CAGCGGCCAGCC ACCAG GGCAGGCCGGCG GTGACGCAGAGGCTG Pmen_3837 4227173 - 4225986 - | extracellular ligand-binding receptor TERM 3160 4227272 - 4227222 - H 71 -8.9 -3.7331 | gap 1, opp_overlap 4227238 4227239, overlap 4227220 4227223 ATTGCTAGCAAAACA GGTGCCACCCCGG-CAAAGCCCGC AAAT ACGGGCCTTGTCCATGGCGCCACT TCAGAAACCGCCCCA Pmen_3838 4227338 - 4227736 + | hypothetical protein TERM 3161 4227962 - 4228015 + G 77 -16.5 -2.71144 | gap 1, opp_overlap 4227964 ACGGCCAATGCCACC AACGC-CGTGGCCCTGTGGCCGGCCA GCC TGGCCGGCGCCTGGGCCGCGCGCGCC TCGTTGCGGCCGCTG TERM 3162 4228013 - 4227964 - g 100 -21.3 -3.18681 | gap 1, opp_overlap 4227962 GGCCAATGCCACCAA CGC-CGTGGCCCTGTGGCCGGCCA GCC TGGCCGGCGCCTGGGCCGCGCGCG CCTCGTTGCGGCCGC Pmen_3839 4227821 - 4228591 + | hypothetical protein TERM 3163 4228594 - 4228619 + F 74 -6.1 -4.52589 | gap 1, overlap 4228598 4228599 CTTCTCTGCATAGGC CGTAGGGTGTGC CAT GCGCACCAT-CG TTTTCTATCGCCGAG Pmen_3840 4228607 - 4229005 + | exodeoxyribonuclease VII, small subunit Pmen_3841 4229002 - 4229889 + | farnesyl-diphosphate synthase TERM 3164 4230644 - 4230630 - g 72 -8.5 -4.11394 | ACTGTACGTGGAAAA GCGCG TGCGC CGCGC CCGGCATATCGAAGT TERM 3165 4231112 - 4231067 - g 74 -12.4 -3.60792 | gap 1 GTCTGAATCTGGAAA CCCTGCTCGCCGATGGCACGG CGCGC CCG-GCCAGCGGCGTGCTCGG CGCCTACCAGCCGCC Pmen_3842 4230034 - 4233306 + | pyruvate carboxylase., propionyl-CoA carboxylase Pmen_3843 4233317 - 4234267 + | alpha/beta hydrolase fold TERM 3166 4234285 - 4234324 + F 71 -7.8 -4.13014 | overlap 4234280 4234288 GCGATATGGACAGCG GATTGGGCTGTTTTCCTG GCAT CAGGTAAACTGCCGCATC TTTTACGCCTATAAC Pmen_3844 4234350 - 4236245 + | 1-deoxy-D-xylulose-5-phosphate synthase Pmen_3845 4236609 - 4238495 + | TonB-dependent receptor, plug Pmen_3846 4239355 - 4238561 - | periplasmic binding protein TERM 3167 4238909 - 4238893 - G 76 -6.5 -4.54449 | AGATCTGATAGAAAA CGCTCAG GGG CTGATCG CGCCGGTAGCGCTGG Pmen_3847 4239770 - 4239357 - | hypothetical protein ribA 4240426 - 4239767 - | GTP cyclohydrolase II Pmen_3849 4241143 - 4240499 - | aspartyl protease-like protein Pmen_3850 4241932 - 4241162 - | hypothetical protein Pmen_3851 4242443 - 4241910 - | phosphatidylglycerophosphatase Pmen_3852 4243406 - 4242453 - | thiamine monophosphate kinase TERM 3168 4243176 - 4243152 - G 70 -11.3 -3.60296 | overlap 4243153 CAGGGCGAGGGTAAA GGCCAAGGGCG TCG CGCCCATGGCA GCCAGATCGCTGGCG TERM 3169 4243175 - 4243153 - G 72 -14.8 -2.75963 | overlap 4243152 AGGGCGAGGGTAAAG GCCAAGGGCG TCG CGCCCATGGC AGCCAGATCGCTGGC TERM 3170 4243215 - 4243196 - G 72 -11.4 -3.53224 | GATCGCTGGCGGAAA CGGCCAGC GCGC GCTGACCG AGAAGAAAGGCATCG nusB 4243882 - 4243403 - | transcription antitermination protein NusB ribH 4244355 - 4243879 - | riboflavin synthase subunit beta TERM 3171 4244402 - 4244380 - R 72 -11.2 -3.36073 | overlap 4244378 4244381 CACATGGGTTAAAGA GCCGGAGCGC CTT GCGCTCCGAA AATAAAATTCGTTTG TERM 3172 4244401 - 4244381 - R 76 -14.7 -2.61322 | overlap 4244380 4244378 ACATGGGTTAAAGAG CCGGAGCGC CTT GCGCTCCGA AAATAAAATTCGTTT TERM 3173 4244597 - 4244549 - R 81 -13.2 -3.28791 | gap 1, overlap 4244551 AGGCGTTGGCCATAA CACCCTCTCCCGCCCTCCGGG CACCCTCT CCCGCAAG-CGGGAGAGGGTC ATCAGCATTGGCCCT TERM 3174 4244595 - 4244551 - R 85 -15.8 -3.21276 | gap 1, overlap 4244549 GCGTTGGCCATAACA CCCTCTCCCGCCCTCCGGG CACCCTCT CCCGCAAG-CGGGAGAGGG TCATCAGCATTGGCC Pmen_3855 4245703 - 4244624 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein Pmen_3856 4246378 - 4245716 - | riboflavin synthase subunit alpha TERM 3175 4246818 - 4246804 - R 85 -12.8 -3.79906 | opp_overlap 4246811 4246813 GGACGTGGAGAAGAA CCGCGG CGG CCGCGG TGCGCGCGGCGCACC Pmen_3857 4247949 - 4246834 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Pmen_3858 4248413 - 4247946 - | transcriptional regulator NrdR Pmen_3859 4248525 - 4248977 + | hypothetical protein Pmen_3860 4248974 - 4249633 + | methyltransferase type 12 Pmen_3861 4249688 - 4250560 + | thioredoxin TERM 3176 4250705 - 4250722 + T 73 -10.5 -3.65529 | opp_overlap 4250705, overlap 4250706 CCACCCAGTGATAGA TCGGCGC ATCC GCGCCGG TTTCCATGCGGATCT Pmen_3862 4251020 - 4250682 - | hypothetical protein Pmen_3863 4251134 - 4251712 + | hypothetical protein Pmen_3864 4251812 - 4252519 + | ABC transporter related Pmen_3865 4252521 - 4253786 + | hypothetical protein TERM 3177 4253798 - 4253827 + F 82 -15.1 -3.15579 | gap 1, opp_overlap 4253793 4253794 CTGAGGGAAAGTTGA GAGCGCCTGGCGTA CAC TGCG-CAGGCGCTC TTACTACGAGGTTCC Pmen_3866 4253845 - 4254366 + | hypothetical protein TERM 3178 4254513 - 4254545 + T 82 -14.4 -3.14132 | gap 1, opp_overlap 4254519, overlap 4254519 ACCGAGACGCCCCAT G-AAAAAGCCAGACC CCGG GGTCTGGCTTTTTAC TTGGTGCGCGCGGCG TERM 3179 4254519 - 4254538 + T 100 -13.6 -4.90266 | opp_overlap 4254519, overlap 4254513 ACGCCCCATGAAAAA GCCAGACC CCGG GGTCTGGC TTTTTACTTGGTGCG TERM 3180 4254538 - 4254519 - T 100 -13.6 -4.7254 | opp_overlap 4254519 4254513 ACGCCCCATGAAAAA GCCAGACC CCGG GGTCTGGC TTTTTACTTGGTGCG Pmen_3867 4255697 - 4254600 - | hypothetical protein Pmen_3868 4256383 - 4255700 - | TonB family protein TERM 3181 4256032 - 4256073 + g 82 -17.2 -3.02144 | gap 1 GCGGCGTCGGCGCTG GCGCGCCCGGCGCCAGGCC GGACA GGCTCGGCGACGG-CGCGC TGTTGACGGCGATAC Pmen_3869 4256793 - 4256383 - | biopolymer transport protein ExbD/TolR Pmen_3870 4257353 - 4256805 - | MotA/TolQ/ExbB proton channel Pmen_3871 4258695 - 4257346 - | MotA/TolQ/ExbB proton channel TERM 3182 4257622 - 4257648 + g 74 -5.1 -4.56597 | gap 1 CAGCGGCGCCACGGC GGCCAGCAGCTT GAGC AGGCC-CTGGCC TTTTTCCAGCGGCGG TERM 3183 4258399 - 4258410 + g 81 -5.8 -4.77036 | overlap 4258398 4258397 AAGGTGACCGACACG CTGC GCCA GCAG TTTTTCCTGCTCGGC Pmen_3872 4259465 - 4258692 - | hypothetical protein TERM 3184 4259573 - 4259549 - H 79 -8.5 -4.48823 | opp_overlap 4259553, overlap 4259551 AATCAATGGACAAAA CAGCTCGGCAG AGC CCGCCGATCTA TTGAGCCAGGTCAAA TERM 3185 4259571 - 4259551 - H 71 -8.9 -3.84304 | opp_overlap 4259553, overlap 4259549 TCAATGGACAAAACA GCTCGGCAG AGC CCGCCGATC TATTGAGCCAGGTCA Pmen_3873 4259658 - 4260341 + | OmpW family protein TERM 3186 4260386 - 4260357 - T 100 -20.9 -4.07885 | opp_overlap 4260357 4260364, overlap 4260364 CAGCCCGCGCGAAAA CGAAAAAGCCGGC AGAT GCCGGCTTTTTCG TTTTCGCAGTCCGGA TERM 3187 4260357 - 4260386 + T 100 -20.9 -4.11216 | opp_overlap 4260357 4260364, overlap 4260364 CAGCCCGCGCGAAAA CGAAAAAGCCGGC AGAT GCCGGCTTTTTCG TTTTCGCAGTCCGGA TERM 3188 4260364 - 4260379 + T 100 -11.8 -5.0925 | opp_overlap 4260357 4260364, overlap 4260357 CGCGAAAACGAAAAA GCCGGC AGAT GCCGGC TTTTTCGTTTTCGCA TERM 3189 4260379 - 4260364 - T 100 -11.8 -5.0925 | opp_overlap 4260364 4260357, overlap 4260357 CGCGAAAACGAAAAA GCCGGC AGAT GCCGGC TTTTTCGTTTTCGCA Pmen_3874 4261493 - 4260573 - | NAD-dependent epimerase/dehydratase Pmen_3875 4262370 - 4261486 - | dTDP-4-dehydrorhamnose reductase Pmen_3876 4262877 - 4262389 - | single-strand binding protein Pmen_3877 4264281 - 4262887 - | major facilitator transporter uvrA 4264416 - 4267256 + | excinuclease ABC subunit A TERM 3190 4268195 - 4268222 + G 78 -14.8 -3.28924 | opp_overlap 4268195, overlap 4268196 CGTCTGGCCGACCAA TGCCGCCGTCGC GCCC GCGGCGGTGGCG TTGTCGAAGCAGATG TERM 3191 4268196 - 4268221 + G 77 -16.1 -2.57211 | opp_overlap 4268195, overlap 4268195 GTCTGGCCGACCAAT GCCGCCGTCGC GCCC GCGGCGGTGGC GTTGTCGAAGCAGAT Pmen_3879 4267356 - 4268624 + | peptidase M14, carboxypeptidase A TERM 3192 4268713 - 4268740 + T 95 -12.7 -4.18018 | gap 1, opp_overlap 4268713 TTGGCCAAGAAAAAA GCCGCG-CGCCT CAGGA GGGCGTCGCGGC TTTTCCATCGAGGAA TERM 3193 4268740 - 4268713 - T 100 -12 -5.4505 | gap 1, opp_overlap 4268713 TTGGCCAAGAAAAAA GCCGCG-CGCC TCAGGAG GGCGTCGCGGC TTTTCCATCGAGGAA Pmen_3880 4269243 - 4268779 - | bacterioferritin TERM 3194 4269315 - 4269345 + r 93 -16.9 -3.33696 | opp_overlap 4269315 TTCGGTCAAGCAAAA GCACAACGCCTCC ACGAG GGAGGCGTTGCGC TTCATTGACGCAGCG TERM 3195 4269345 - 4269315 - R 100 -19.1 -4.4078 | opp_overlap 4269315 TTCGGTCAAGCAAAA GCACAACGCCTCC ACGAG GGAGGCGTTGCGC TTCATTGACGCAGCG Pmen_3881 4271511 - 4269361 - | catalase/peroxidase HPI TERM 3196 4271654 - 4271670 + r 73 -10.8 -3.57792 | opp_overlap 4271654 AGCGCCATGAAAAAA CGGGCC ACCAG GGCCCG TTTCCGACTGCGTGC TERM 3197 4271670 - 4271654 - R 100 -10.8 -5.14965 | opp_overlap 4271654 AGCGCCATGAAAAAA CGGGCC ACCAG GGCCCG TTTCCGACTGCGTGC Pmen_3882 4273073 - 4271694 - | Na+/H+ antiporter NhaC TERM 3198 4273253 - 4273237 - R 100 -10.8 -5.45652 | opp_overlap 4273237 ACGGGCAACAAAAAA CCGGGC ACGAG GCCCGG TTCTTCGTACAACCA TERM 3199 4273237 - 4273253 + r 76 -10.8 -3.71848 | opp_overlap 4273237 ACGGGCAACAAAAAA CCGGGC ACGAG GCCCGG TTCTTCGTACAACCA rplQ 4273660 - 4273274 - | 50S ribosomal protein L17 TERM 3200 4273700 - 4273725 + r 89 -11.9 -4.183 | TCGTTCGGTGATGAT GACGATCAGGC AGTG GCCTTATCGTC TTTCTTCAGACTTGC Pmen_3884 4274706 - 4273705 - | DNA-directed RNA polymerase subunit alpha TERM 3201 4274630 - 4274606 - G 70 -10.7 -3.55563 | opp_overlap 4274606 4274609, overlap 4274607 AGGGTATGGCCGAAA CCACGCTCGAG AGG CTCGAGGGTGA TCTTGGCGCGGGTCG rpsD 4275349 - 4274729 - | 30S ribosomal protein S4 Pmen_3886 4275756 - 4275367 - | 30S ribosomal protein S11 TERM 3202 4275680 - 4275715 + g 88 -8.2 -4.86939 | gap 1, opp_overlap 4275680 ATGGTGTTGTTGAAA GACGCGTGGATGTGGGC GAT GCCATCAACCAC-CGTC TTTTTGACTTTCTTA rpsM 4276143 - 4275787 - | 30S ribosomal protein S13 TERM 3203 4276262 - 4276225 - R 100 -12.8 -4.85782 | opp_overlap 4276231 4276232, overlap 4276232 CGCTGTAAAAACAAA TAATCAACCCGGCAGC GCACTA GCTGCCGGGCTTATCA CGCGTGGTTCACACT TERM 3204 4276231 - 4276256 + r 72 -11.8 -3.30619 | opp_overlap 4276225 4276232, overlap 4276232 AAAAACAAATAATCA ACCCGGCAGC GCACTA GCTGCCGGGC TTATCACGCGTGGTT TERM 3205 4276232 - 4276255 + r 76 -15.3 -2.5805 | opp_overlap 4276225 4276232, overlap 4276231 AAAACAAATAATCAA CCCGGCAGC GCACTA GCTGCCGGG CTTATCACGCGTGGT TERM 3206 4276255 - 4276232 - R 93 -15.3 -3.72745 | opp_overlap 4276232 4276231, overlap 4276225 AAAACAAATAATCAA CCCGGCAGC GCACTA GCTGCCGGG CTTATCACGCGTGGT rpmJ 4276393 - 4276277 - | 50S ribosomal protein L36 secY 4277750 - 4276422 - | preprotein translocase subunit SecY rplO 4278182 - 4277751 - | 50S ribosomal protein L15 rpmD 4278364 - 4278185 - | 50S ribosomal protein L30 rpsE 4278867 - 4278367 - | 30S ribosomal protein S5 rplR 4279221 - 4278871 - | 50S ribosomal protein L18 rplF 4279766 - 4279233 - | 50S ribosomal protein L6 rpsH 4280171 - 4279779 - | 30S ribosomal protein S8 TERM 3207 4280213 - 4280200 - R 81 -8.1 -4.58943 | CTGATACAAAAAGAA CAGCC CGAG GGCTG TGGGATCATCCAAAA TERM 3208 4280315 - 4280287 - R 100 -12.6 -4.76041 | gap 1, opp_overlap 4280292 4280295, overlap 4280292 GAGACCGATCAAAAA TGAAGCAAGCCCC AAAA GGGGCTTG-TTCA TATAAAGACAAAGCC TERM 3209 4280311 - 4280292 - R 75 -13.6 -2.90218 | opp_overlap 4280292 4280295, overlap 4280287 CGATCAAAAATGAAG CAAGCCCC AAAA GGGGCTTG TTCATATAAAGACAA TERM 3210 4280292 - 4280311 + r 78 -13.6 -3.25823 | opp_overlap 4280292 4280287, overlap 4280295 CGATCAAAAATGAAG CAAGCCCC AAAA GGGGCTTG TTCATATAAAGACAA TERM 3211 4280295 - 4280308 + r 71 -9.5 -3.7732 | opp_overlap 4280292 4280287, overlap 4280292 TCAAAAATGAAGCAA GCCCC AAAA GGGGC TTGTTCATATAAAGA TERM 3212 4280323 - 4280349 + r 100 -7.9 -5.19212 | opp_overlap 4280324 4280328, overlap 4280324 CTTGTTCATATAAAG ACAAAGCCGGC ACTAG GCCGGCTTCGC TTTTTTACTGCTACT TERM 3213 4280324 - 4280348 + r 77 -11.4 -3.70443 | opp_overlap 4280324 4280328, overlap 4280323 TTGTTCATATAAAGA CAAAGCCGGC ACTAG GCCGGCTTCG CTTTTTTACTGCTAC TERM 3214 4280348 - 4280324 - R 88 -13.6 -3.61232 | opp_overlap 4280324 4280323, overlap 4280328 TTGTTCATATAAAGA CAAAGCCGGC ACTAG GCCGGCTTCG CTTTTTTACTGCTAC TERM 3215 4280344 - 4280328 - R 87 -10.8 -4.43283 | opp_overlap 4280324 4280323, overlap 4280324 TCATATAAAGACAAA GCCGGC ACTAG GCCGGC TTCGCTTTTTTACTG rpsN 4280669 - 4280364 - | 30S ribosomal protein S14 TERM 3216 4280475 - 4280520 + g 75 -13.9 -3.28712 | gap 1 CGGACGGCCGGTGAT GCGGCAGCGGTTACGCAGGCGC GAG GCGCTGGCGTCAC-GCGGCTGC TTCTGCAGAGCGACC rplE 4281224 - 4280685 - | 50S ribosomal protein L5 rplX 4281558 - 4281244 - | 50S ribosomal protein L24 TERM 3217 4281529 - 4281550 + g 74 -8.1 -4.23758 | gap 1, overlap 4281533 GCCGGCGATCACGAT GATCTCGTCG TCA CGACGA-ATC TTTTGCATGTCGGAT rplN 4281938 - 4281570 - | 50S ribosomal protein L14 rpsQ 4282228 - 4281962 - | 30S ribosomal protein S17 TERM 3218 4282192 - 4282209 + g 79 -3.3 -5.09426 | CGCTGACAACACGGC CGGTCAG CGTA CGGACTG TTTTTTCAACTTCGG Pmen_3901 4282422 - 4282231 - | 50S ribosomal protein L29 TERM 3219 4282352 - 4282394 + g 75 -7.1 -4.37658 | opp_overlap 4282348, overlap 4282348 4282348 4282353 4282357 CGCAGATTGAACTGG TCGCGCAGCAGCTCGAGC-AG TTG CTCGTTC-AGCTGTTGTGCGC TTTTATCACGAAGTT rplP 4282835 - 4282422 - | 50S ribosomal protein L16 rpsC 4283534 - 4282848 - | 30S ribosomal protein S3 rplV 4283880 - 4283548 - | 50S ribosomal protein L22 TERM 3220 4283686 - 4283661 - G 74 -7.5 -4.25104 | opp_overlap 4283653 CTTCGTTGACGAAAA CGGTGCTGACC TTCA GGTCATCAACG TCTGCGCCTTCGTTG TERM 3221 4283701 - 4283733 + g 89 -10.6 -4.28111 | gap 1 GTCTGCGCCTTCGTT GTGCTCGGCGTTGGC AACG GCCGACTCC-AGCAC TTTCTTCATGATCTC rpsS 4284167 - 4283892 - | 30S ribosomal protein S19 rplB 4285008 - 4284184 - | 50S ribosomal protein L2 rplW 4285322 - 4285023 - | 50S ribosomal protein L23 rplD 4285921 - 4285319 - | 50S ribosomal protein L4 rplC 4286565 - 4285936 - | 50S ribosomal protein L3 rpsJ 4286960 - 4286649 - | 30S ribosomal protein S10 TERM 3222 4287097 - 4287072 - R 100 -17.7 -4.17023 | opp_overlap 4287077, overlap 4287077 TTAACCAGTTCAAAA GAAAAGGGCCC CGAA GGGCCCTTTTC TCTCAAGCGGATCGT TERM 3223 4287092 - 4287077 - R 100 -11.8 -5.09259 | opp_overlap 4287077, overlap 4287072 CAGTTCAAAAGAAAA GGGCCC CGAA GGGCCC TTTTCTCTCAAGCGG TERM 3224 4287077 - 4287092 + r 95 -11.8 -4.52589 | opp_overlap 4287077 4287072 CAGTTCAAAAGAAAA GGGCCC CGAA GGGCCC TTTTCTCTCAAGCGG Pmen_3911 4288309 - 4287116 - | elongation factor Tu Pmen_3912 4290487 - 4288340 - | elongation factor G Pmen_3913 4290988 - 4290518 - | 30S ribosomal protein S7 TERM 3225 4291112 - 4291080 - R 85 -3.3 -5.38326 | opp_overlap 4291087, overlap 4291083 4291084 TCAACTAAATAAAAA GGATCAAGCGGCC TTATTTC GGACGCTTGGTAC CGTACTTGGAACGAC rpsL 4291464 - 4291093 - | 30S ribosomal protein S12 TERM 3226 4291531 - 4291505 - R 70 -4.3 -4.55697 | opp_overlap 4291505 4291506, overlap 4291507 ACGCTCACAAATAAA GATGGCAGAGC CAAAC GCCCTGCCAAA TTTAGGGGTGCATGA TERM 3227 4291529 - 4291507 - R 82 -11.3 -3.88703 | opp_overlap 4291506 4291505, overlap 4291505 GCTCACAAATAAAGA TGGCAGAGC CAAAC GCCCTGCCA AATTTAGGGGTGCAT TERM 3228 4291568 - 4291536 - R 76 -15 -2.64155 | gap 1, overlap 4291533 4291532 4291554 GCCCTGCCAAATTTA GGGGTGCATGAGTCT AAAG AGACTCACGC-CCCC AGTCAAGGCAAAGCC TERM 3229 4291610 - 4291575 - R 83 -16.2 -3.05596 | opp_overlap 4291571 4291575, overlap 4291581 CACGCCCCCAGTCAA GGCAAAGCCCCGCTAG CGAA CTAGCGAGGCTTCGAC TCAATTTCCGCTCGA TERM 3230 4291604 - 4291581 - R 93 -14.6 -3.76952 | opp_overlap 4291575 4291571, overlap 4291575 CCCAGTCAAGGCAAA GCCCCGCTAG CGAA CTAGCGAGGC TTCGACTCAATTTCC Pmen_3915 4295810 - 4291611 - | DNA-directed RNA polymerase subunit beta' TERM 3231 4291947 - 4291967 + g 72 -13.3 -3.14468 | GGCCAGACGCTCGTT CTCGCCCAG AAC CTGGGTGAG TTCCATCTGGTCGCC TERM 3232 4293840 - 4293861 + g 83 -8.7 -4.63932 | gap 1 CTTCACTTCCTCGGT GGCG-GCGTC GAT GATGCGCGCC TTTTCTTCCGGGATG TERM 3233 4295106 - 4295124 + g 72 -14.6 -2.72379 | GGTCAGCACCATCCA CTCCGGCA GGT TGCCGGAG TCCTTGAAGGCTTCC rpoB 4299947 - 4295874 - | DNA-directed RNA polymerase subunit beta TERM 3234 4300123 - 4300100 - R 100 -16 -4.78149 | opp_overlap 4300093 CCTAGAACGGAAAAA GGCCGGTGGC AGAA GCCACCAGCC GTCAGCCTTGTGCGA rplL 4300541 - 4300170 - | 50S ribosomal protein L7/L12 rplJ 4301122 - 4300622 - | 50S ribosomal protein L10 TERM 3235 4301119 - 4301136 + g 71 -3.3 -4.70879 | overlap 4301134 CTTCGAGTTTAATTG CCACGGG TTTA CTCCTGG TTTTTACCGTTTCGC TERM 3236 4301325 - 4301303 - R 93 -16.3 -3.57561 | opp_overlap 4301299 CCCCAATCTTTCAAA GCCGGCAGC GCATG GCTGCCGGC CCAATCACTTACGCG rplA 4302029 - 4301334 - | 50S ribosomal protein L1 rplK 4302460 - 4302029 - | 50S ribosomal protein L11 TERM 3237 4302559 - 4302537 - R 100 -20.6 -4.4767 | opp_overlap 4302530 CCAGTGACGACAAAA CCCCGCAGCC TAA GGCTGCGGGG TGAGGGATGCTTATG nusG 4303112 - 4302579 - | transcription antitermination protein NusG TERM 3238 4302785 - 4302806 + g 71 -2.9 -4.68593 | opp_overlap 4302784, overlap 4302784 4302788 CGCTATCGGCAACAC GACGCAGAA TGGC TTCGGCTTC TTTTTCGGTGATCGG secE 4303490 - 4303122 - | preprotein translocase subunit SecE TERM 3239 4303643 - 4303618 - R 89 -10.4 -4.56914 | TGACCTAAAGCAAAA TCAGGCCGAC CATTAT GCCGGCCCGA GAGGAACAGATCAAC Pmen_3923 4304855 - 4303662 - | elongation factor Tu TERM 3240 4304930 - 4304909 - R 85 -9.5 -4.72007 | opp_overlap 4304909 CGCCATTAAAACAAA GGCAGATAC TTTC ATATCTGCC TTCATTAGATGGAGC Pmen_3924 4306043 - 4305366 - | sporulation domain-containing protein Pmen_3925 4306798 - 4306052 - | pantothenate kinase Pmen_3926 4307753 - 4306788 - | biotin--protein ligase TERM 3241 4307906 - 4307851 - R 100 -23.4 -2.81535 | gap 1, opp_overlap 4307852 4307878 4307895, overlap 4307847 4307848 TCAGGACAAAACGTA GGGTGCGCCGCGCGCACCTTTG-TAAC CGC GTCATCAGCGGTGCGCACAGCGCACCC TACGCGCTCTGTATT TERM 3242 4307852 - 4307868 + r 91 -13.7 -3.86346 | opp_overlap 4307847 4307848 4307851 CAGGACAAAACGTAG GGTGCGC CGC GCGCACC TTTGTAACCGCGTCA TERM 3243 4307971 - 4307938 - R 100 -20.5 -4.09117 | opp_overlap 4307942, overlap 4307942 TCCAGCCACAAAGAA GAAACCCCAGACCTC TTTC GAGATCTGGGGTTTC GTATAGGAGCTTGAC TERM 3244 4307967 - 4307942 - R 100 -15.5 -4.63048 | opp_overlap 4307942, overlap 4307938 GCCACAAAGAAGAAA CCCCAGACCTC TTTC GAGATCTGGGG TTTCGTATAGGAGCT TERM 3245 4307942 - 4307967 + r 91 -13.3 -3.83205 | opp_overlap 4307942 4307938 GCCACAAAGAAGAAA CCCCAGACCTC TTTC GAGATCTGGGG TTTCGTATAGGAGCT TERM 3246 4308078 - 4308045 - R 100 -21.9 -3.58726 | opp_overlap 4308048, overlap 4308048 TTTGCGCACATAGAA GAACGCCCAGTCTGC GTTA GCAAACTGGGCGTTC GTATAGGAGCTTGAC TERM 3247 4308048 - 4308075 + r 85 -15.6 -3.26319 | opp_overlap 4308048 4308045 GCGCACATAGAAGAA CGCCCAGTCTGC GTTA GCAAACTGGGCG TTCGTATAGGAGCTT TERM 3248 4308075 - 4308048 - R 100 -17.8 -3.92996 | opp_overlap 4308048, overlap 4308045 GCGCACATAGAAGAA CGCCCAGTCTGC GTTA GCAAACTGGGCG TTCGTATAGGAGCTT Pmen_3927 4315064 - 4313865 - | tyrosyl-tRNA synthetase TERM 3249 4316335 - 4316300 - g 71 -14.6 -2.52015 | overlap 4316299 4316303 GGCACACCGATCAAG GCAGCCGGCGACGGCC GCGT GACCCTGGCCGGCCGC AACGGCGGTTACGGC TERM 3250 4316659 - 4316644 - g 73 -6.1 -4.3129 | CATGGACCAGGAAAA GGCCA CCATGC TGGCC TCCAATCAGCAGTAA Pmen_3928 4315247 - 4316674 + | peptidase M23B TERM 3251 4317042 - 4317057 + G 72 -6.8 -4.25104 | CCGAGCTCACCGGCA TCTGCG TGGT CGCGGA TTTTCGTCGGCGCGA anmK 4316678 - 4317769 + | anhydro-N-acetylmuramic acid kinase TERM 3252 4317799 - 4317779 - T 100 -15.4 -4.67038 | GCCTGAAAACGAAAA CGCCGCGC ATCGA GCGCGGCG TCGTCATGAGGCGAA Pmen_3930 4318169 - 4317819 - | iron-sulfur cluster insertion protein ErpA Pmen_3931 4318653 - 4318243 - | hypothetical protein Pmen_3932 4319385 - 4318660 - | hypothetical protein argC 4320416 - 4319382 - | N-acetyl-gamma-glutamyl-phosphate reductase Pmen_3934 4320553 - 4320981 + | hypothetical protein Pmen_3935 4320992 - 4321954 + | 2-nitropropane dioxygenase, NPD Pmen_3936 4321951 - 4323213 + | alanine racemase domain-containing protein Pmen_3937 4323314 - 4324270 + | hypothetical protein Pmen_3938 4324280 - 4325068 + | short-chain dehydrogenase/reductase SDR Pmen_3939 4326557 - 4325076 - | ATPase central domain-containing protein Pmen_3940 4326679 - 4327512 + | hypothetical protein Pmen_3941 4327580 - 4328227 + | ubiquinone biosynthesis protein COQ7-like protein TERM 3253 4328260 - 4328230 - T 100 -17.7 -3.60627 | gap 1, opp_overlap 4328231 4328234 4328237, overlap 4328234 4328237 CTACCGCATCTGAAA CCAACAAGGGCGCC AATC GGCGCCCTTGT-GG TTTACAGCGTAGAGG TERM 3254 4328231 - 4328260 + T 100 -17.9 -3.55444 | opp_overlap 4328230 4328234 4328237, overlap 4328234 4328237 TACCGCATCTGAAAC CAACAAGGGCGCC AATC GGCGCCCTTGTGG TTTACAGCGTAGAGG TERM 3255 4328257 - 4328234 - T 100 -18.2 -3.53031 | opp_overlap 4328231 4328234 4328237, overlap 4328230 4328237 CGCATCTGAAACCAA CAAGGGCGCC AATC GGCGCCCTTG TGGTTTACAGCGTAG TERM 3256 4328234 - 4328257 + T 86 -18.2 -2.91144 | opp_overlap 4328234 4328230 4328237, overlap 4328231 4328237 CGCATCTGAAACCAA CAAGGGCGCC AATC GGCGCCCTTG TGGTTTACAGCGTAG TERM 3257 4328254 - 4328237 - T 91 -14.1 -3.89756 | opp_overlap 4328237 4328234 4328231, overlap 4328234 4328230 ATCTGAAACCAACAA GGGCGCC AATC GGCGCCC TTGTGGTTTACAGCG TERM 3258 4328237 - 4328254 + T 88 -14.1 -3.60151 | opp_overlap 4328234 4328230 4328237, overlap 4328234 4328231 ATCTGAAACCAACAA GGGCGCC AATC GGCGCCC TTGTGGTTTACAGCG Pmen_3942 4328699 - 4328277 - | OsmC family protein Pmen_3943 4328933 - 4329577 + | cAMP-regulatory protein TERM 3259 4329590 - 4329621 + T 93 -15.3 -3.73953 | opp_overlap 4329597, overlap 4329591 4329597 TGAAAACCCGCTCCA TGAAAAAGCCGGC TTGATT GCCGGCTTTTTCG TTTACTCGGGGTCCT TERM 3260 4329591 - 4329620 + T 85 -16.6 -2.84051 | opp_overlap 4329597, overlap 4329590 4329597 GAAAACCCGCTCCAT GAAAAAGCCGGC TTGATT GCCGGCTTTTTC GTTTACTCGGGGTCC TERM 3261 4329597 - 4329614 + T 100 -9.8 -5.01811 | opp_overlap 4329597, overlap 4329591 4329590 CCGCTCCATGAAAAA GCCGGC TTGATT GCCGGC TTTTTCGTTTACTCG TERM 3262 4329614 - 4329597 - T 89 -9.8 -4.72272 | opp_overlap 4329597 4329591 4329590 CCGCTCCATGAAAAA GCCGGC TTGATT GCCGGC TTTTTCGTTTACTCG trpC 4330462 - 4329623 - | indole-3-glycerol-phosphate synthase TERM 3263 4330353 - 4330411 + g 86 -18.1 -3.16742 | gap 2, opp_overlap 4330337 CCGCGCGGGGCATCG GCGGCGCGGGCGGCCGCTTCCAGTTCGGC GAG GCTGACCTGGACGCGG-CGCGCG-GCCAC TTCCTCGAACTTACG trpD 4331505 - 4330459 - | anthranilate phosphoribosyltransferase Pmen_3946 4332098 - 4331502 - | anthranilate synthase component II TERM 3264 4332449 - 4332424 - H 76 -12.1 -3.39327 | opp_overlap 4332427, overlap 4332427 CCCGCAGATGGACAA GAATACTGTAT AGAA ATACAGTATTC ATATGGACCTACACG TERM 3265 4332593 - 4332577 - g 77 -12.3 -3.63627 | GCGCGACAGGGCAAA CGAGCTG CTG CAGCTCG GCGAGGTCTCGACCG Pmen_3947 4332452 - 4332961 + | hypothetical protein Pmen_3948 4332978 - 4333673 + | hypothetical protein Pmen_3949 4333947 - 4333681 - | hypothetical protein TERM 3266 4334017 - 4334056 + r 100 -25 -4.08485 | opp_overlap 4334001 4334018, overlap 4334018 GCCGGGCACAAAAAA AGGCCCGGTGCCGTAGGG ATTT CCCCACGGCACCGGGCCA TTTCATTTCGGTGAC TERM 3267 4334018 - 4334055 + r 100 -28.5 -3.04609 | opp_overlap 4334001 4334018, overlap 4334017 CCGGGCACAAAAAAA GGCCCGGTGCCGTAGGG ATTT CCCCACGGCACCGGGCC ATTTCATTTCGGTGA TERM 3268 4334055 - 4334018 - R 100 -30.7 -5.60993 | opp_overlap 4334018 4334017, overlap 4334001 CCGGGCACAAAAAAA GGCCCGGTGCCGTAGGG ATTT CCCCACGGCACCGGGCC ATTTCATTTCGGTGA Pmen_3950 4334632 - 4334162 - | hypothetical protein TERM 3269 4334614 - 4334585 - G 72 -13.5 -3.21416 | CAGCGCCATGAGCAA CAGCACGCCGCCA GCTT TGGCGGCCAGCTG GTACCGGACGGGGAT Pmen_3951 4335075 - 4334629 - | hypothetical protein TERM 3270 4335115 - 4335099 - R 100 -10.8 -5.28176 | opp_overlap 4335099 TCCAGGCACAAAAAA GCCCGC GCGTG GCGGGC TTGGTGGTGATGGTC Pmen_3952 4335814 - 4335386 - | hypothetical protein TERM 3271 4335671 - 4335613 - G 79 -13.1 -3.66018 | opp_overlap 4335613 TCATCACCTCAAGAA TCTCGCCAGGCGCACCGGGCGTGGC-GGC TGC GCCAGGTATGCCCGATGCACCCAGCG-GA TGTATCGCCCCCCGC Pmen_3953 4336779 - 4335811 - | hypothetical protein Pmen_3954 4337297 - 4336779 - | hypothetical protein Pmen_3955 4337809 - 4337303 - | hypothetical protein TERM 3272 4337393 - 4337341 - G 91 -12.6 -4.26076 | gap 1 GCAGGTTGAGTAAAA GCCGGCCGCTGGCCACGGCCGCGCC AAGC AGCACGTC-GTAGCCATCAGCAGGC GGGGTTTGAGTGAGC Pmen_3956 4338371 - 4337799 - | hypothetical protein TERM 3273 4338314 - 4338294 - G 70 -11.1 -3.54408 | overlap 4338290 4338295 GGGCAGGTAAACGAA CTCCGGCTG CAT CAGCCGGAC GGTGTCACGGTACGT TERM 3274 4338313 - 4338295 - G 72 -14.6 -2.72324 | overlap 4338294 4338290 GGCAGGTAAACGAAC TCCGGCTG CAT CAGCCGGA CGGTGTCACGGTACG Pmen_3957 4339322 - 4338408 - | hypothetical protein TERM 3275 4339273 - 4339253 - G 79 -11.8 -3.85698 | TCGCCTCCCCAGAAA CCGGCAGC TCGGC GCCGCCGG CAGGTAGCTCATCGG Pmen_3958 4340938 - 4339322 - | hypothetical protein TERM 3276 4340045 - 4340082 + g 73 -12.2 -3.41051 | gap 2, overlap 4340047 AGGCGCACCGGCATC GTAG-A-GCGCACCGACT ACGT AGTCGGTGCGCGTCCTGC TTATGATCGAGCTGC TERM 3277 4340453 - 4340417 - G 81 -16.5 -3.08679 | opp_overlap 4340448 GGCGCGGAGGGAATA GCTGGGGCTGGCCGCAA CGG CCGATGCCAGCCCCAGC GACGACTCCGTGCGG TERM 3278 4340693 - 4340650 - G 75 -13 -3.36492 | opp_overlap 4340649 4340647 4340646 TGCTCAAGCTGACAA GCCGGCGGCCGAGGCTGC GCCCGCCT GCCGCCTCGATCTCCGGC GTGGTTTCAGGGTCA Pmen_3959 4341384 - 4340935 - | hypothetical protein Pmen_3960 4343108 - 4341387 - | hypothetical protein TERM 3279 4341905 - 4341957 + g 74 -14.9 -3.02144 | GGTGCGCGCTCAGCA GCTCGACGGCGC--CGCCGCGCAGCAG GGT CTGCAGCGCGGCAATGCGCCG-CG-GC TCTTCGGCAAGATCG Pmen_3961 4343615 - 4343112 - | hypothetical protein TERM 3280 4343338 - 4343291 - G 78 -14 -3.53012 | gap 1, overlap 4343300 GTGTGCGCCGCCAAA CGCCATCAACCCGAGCCCGCGCC CAG GGCGCACGGTCGGGGCG-CGGCG TGCTGGGCAGCACAT TERM 3281 4343330 - 4343300 - G 76 -14.6 -3.2048 | overlap 4343291 GCCAAACGCCATCAA CCCGAGCCCGCGCC CAG GGCGCACGGTCGGG GCGCGGCGTGCTGGG TERM 3282 4343658 - 4343633 - R 74 -3.1 -4.82901 | opp_overlap 4343635 4343637, overlap 4343634 4343635 CGTGCTCCAGAAAAA GTTGGGCCCTC GAAC GAGGGCCTATT TGCGACGGGAAGATC TERM 3283 4343635 - 4343656 + r 79 -12.3 -3.53012 | opp_overlap 4343634 4343633 4343635, overlap 4343637 TGCTCCAGAAAAAGT TGGGCCCTC GAAC GAGGGCCTA TTTGCGACGGGAAGA TERM 3284 4343637 - 4343654 + r 76 -12.7 -3.34398 | opp_overlap 4343635 4343634 4343633, overlap 4343635 CTCCAGAAAAAGTTG GGCCCTC GAAC GAGGGCC TATTTGCGACGGGAA Pmen_3962 4345669 - 4343654 - | hypothetical protein TERM 3285 4344422 - 4344405 - G 83 -12.7 -4.12942 | overlap 4344395 TGAAACTGCCCAAAA CTCGGGC CGCT GCCCGAG CCCGAGCGAAAGCCG Pmen_3963 4345818 - 4345669 - | hypothetical protein Pmen_3964 4346207 - 4345845 - | hypothetical protein TERM 3286 4346243 - 4346230 - R 100 -9.5 -5.4505 | opp_overlap 4346230 CCGGGCAATAAAAAA CCCGC CGAA GCGGG TTCTGAAAAATGCGG Pmen_3965 4347516 - 4346731 - | hypothetical protein Pmen_3966 4347986 - 4347540 - | hypothetical protein TERM 3287 4347683 - 4347650 - G 70 -13.1 -3.01712 | gap 1 CCTCCTCGTTCAACA GGCCGGGGAACTGCCG CTC CGGCAGATCCT-GGCC AATACCGAAGGCGCG Pmen_3967 4348577 - 4347990 - | hypothetical protein Pmen_3968 4349125 - 4348574 - | hypothetical protein Pmen_3969 4349658 - 4349128 - | hypothetical protein Pmen_3970 4351166 - 4349925 - | HK97 family phage major capsid protein TERM 3288 4351096 - 4351117 + g 77 -7.9 -4.41348 | overlap 4351097 4351098 CAATTGTCGCCAGTG TTCGCGTCC ATCA GGGCGCGGG TTTCTTTCGCCAGGG TERM 3289 4351211 - 4351198 - R 100 -9.5 -5.71712 | opp_overlap 4351198 4351198 TCGGACATAAAAAAA CCGCC GGTT GGCGG TTTCGGTGCTGCGCG TERM 3290 4351198 - 4351247 + r 72 -11.3 -3.33696 | gap 1, opp_overlap 4351198, overlap 4351198 TCGGACATAAAAAAA CCGCCGGTTGGC-GGTTTCGGTGC TGC GCGCGGGAGCCCGCTACGCGGCGG TTCGTTCCAGCAGGC Pmen_3971 4351887 - 4351237 - | peptidase S14, ClpP TERM 3291 4351419 - 4351405 - G 74 -7.8 -4.25056 | opp_overlap 4351404 CAGGCGATCAACAAA GCCGTG CTC CACAGC CTCTTCGGCGCTGAA Pmen_3972 4353142 - 4351907 - | HK97 family phage portal protein TERM 3292 4352866 - 4352853 - G 71 -3.1 -4.59773 | gap 1, opp_overlap 4352854 GCGTAGGCCGAAAAA CAAGGC GTA GCCT-G TTCATTGAGCAGCCA Pmen_3973 4354916 - 4353210 - | phage terminase Pmen_3974 4355421 - 4354900 - | hypothetical protein Pmen_3975 4355939 - 4355556 - | HNH endonuclease Pmen_3976 4356376 - 4355942 - | phage holin TERM 3293 4356161 - 4356179 + g 72 -5.8 -4.42238 | CAGGCCAGCTTCGAG GGCGATGC GCT GCCACGCC TTTTCCTTGCGGTCG TERM 3294 4356358 - 4356339 - G 100 -12.8 -5.27335 | TGGCGGAAACAAAAA GCCCCGGC ACAT GCCGAGGC TCGAATGGGTAGGTG TERM 3295 4356446 - 4356415 - R 82 -10.9 -3.87815 | opp_overlap 4356422, overlap 4356422 CCGGAGCGCCATAAA CAAAAAACCCGGC TCGCTG GCCGGGTTTGCTG AGAAGCCGCCTAAGC TERM 3296 4356422 - 4356439 + r 76 -10.5 -3.72576 | opp_overlap 4356415 4356422 GCCATAAACAAAAAA CCCGGCT CGCT GGCCGGG TTTGCTGAGAAGCCG TERM 3297 4356439 - 4356422 - R 100 -9.8 -5.72622 | opp_overlap 4356422, overlap 4356415 GCCATAAACAAAAAA CCCGGC TCGCTG GCCGGG TTTGCTGAGAAGCCG TERM 3298 4356741 - 4356722 - R 93 -11.4 -4.31895 | gap 1, opp_overlap 4356736 AGAGAGATTAATAAA CGCTGCGCG TAA CGCGC-GCG CGTGCATCTGCCTGC TERM 3299 4356855 - 4356828 - R 72 -11.2 -3.28712 | overlap 4356845 GCGCGGGCTGTAGAA GTCCCGCCAGCA AAAA CGCGAGCGGGAC AAGCCGGGGCGGTGC TERM 3300 4356895 - 4356858 - R 72 -11.2 -3.31263 | gap 1, overlap 4356845 ACGCGAGCGGGACAA GCCGGGGCGGTGCGACA GATCA CGCCGC-CCGCTCCAGC AGCATACCTGCAATC Pmen_3977 4357245 - 4356877 - | hypothetical protein Pmen_3978 4359476 - 4357242 - | virulence-associated E family protein Pmen_3979 4359861 - 4359469 - | hypothetical protein TERM 3301 4359629 - 4359617 - G 76 -6.3 -4.45544 | CGGCACCAACGAAAA GTGAA GAA TTCAC CATCAGCGATATCGA Pmen_3980 4360076 - 4359858 - | TraR/DksA family transcriptional regulator Pmen_3981 4360581 - 4360069 - | hypothetical protein TERM 3302 4360818 - 4360859 + r 72 -13.7 -2.56914 | opp_overlap 4360810, overlap 4360813 GAAGCAAGCTGCCAG TGACCAGGGCGAGGGCTAT TGAT ATAGTCCGCGCCATGGTCC TCCCTTCGTCAGGTG TERM 3303 4360967 - 4360982 + r 100 -11.8 -5.36441 | opp_overlap 4360951 4360967 4360966 4360964 GCGGCCGGGAAACAG GGCGCC TTAC GGCGCC TTTTTTCTATGCAGC Pmen_3982 4361216 - 4360989 - | helix-turn-helix domain-containing protein TERM 3304 4361389 - 4361366 - g 79 -8 -4.54727 | CTGCGCAAAGCAAAA GGCATGAGCC AGCA GGCTCTAGCC GAAGAATGCGGCTGG Pmen_3983 4361321 - 4362043 + | putative phage repressor TERM 3305 4362082 - 4362041 - f 74 -5.3 -4.55697 | gap 1, opp_overlap 4362044 4362069, overlap 4362044 ACGGCCAGAAAGAAA TAATCACATAACGTGTTGAC TTA ACCAACACGACACGTGA-TA TTTGCCTCGTCTCTC TERM 3306 4362080 - 4362044 - f 82 -9.5 -4.38748 | opp_overlap 4362044 4362069, overlap 4362041 GCCAGAAAGAAATAA TCACATAACGTGTTGAC TTA ACCAACACGACACGTGA TATTTGCCTCGTCTC Pmen_3984 4362278 - 4362547 + | hypothetical protein Pmen_3985 4362544 - 4363140 + | hypothetical protein Pmen_3986 4363151 - 4363441 + | hypothetical protein Pmen_3987 4363598 - 4364071 + | hypothetical protein Pmen_3988 4364068 - 4364397 + | hypothetical protein Pmen_3989 4364394 - 4364657 + | hypothetical protein Pmen_3990 4364732 - 4365418 + | hypothetical protein Pmen_3991 4365415 - 4365960 + | hypothetical protein Pmen_3992 4365957 - 4366865 + | hypothetical protein TERM 3307 4367011 - 4366991 - T 100 -12.5 -4.36914 | overlap 4366992 GGGGGCGTTATAAAA CGCCGCGCC GAA GGCGCGACA TCATCCAATACCCTG TERM 3308 4367010 - 4366992 - T 78 -13.8 -3.21934 | overlap 4366991 GGGGCGTTATAAAAC GCCGCGCC GAA GGCGCGAC ATCATCCAATACCCT Pmen_3993 4367809 - 4367147 - | hypothetical protein Pmen_3994 4367884 - 4368120 + | phage transcriptional regulator, AlpA TERM 3309 4368099 - 4368117 + T 84 -17.4 -2.71144 | opp_overlap 4368099 GATTGAAAAGCAAAA GGCCGCCC GTA GGGCGGCC TGATTGCGAGACCTA TERM 3310 4368117 - 4368099 - T 100 -17.4 -4.68645 | opp_overlap 4368099 GATTGAAAAGCAAAA GGCCGCCC GTA GGGCGGCC TGATTGCGAGACCTA Pmen_3995 4368490 - 4368134 - | hypothetical protein Pmen_3996 4369661 - 4368492 - | phage integrase family protein TERM 3311 4369670 - 4369707 + r 85 -2.7 -5.42862 | gap 2, opp_overlap 4369658 AAGGCATGAGGGTAT GCGGGTATC--AGCGAG ACGATA CCCGCAACGATACCCGC TTTTTTTAAGGATGT Pmen_3997 4371348 - 4369858 - | anthranilate synthase component I TERM 3312 4371543 - 4371512 - R 73 -10 -3.61715 | overlap 4371515 4371517 CAGGCGGGGGAATAA GGAGAGCGGCCACG GTAG CGCAGCCGCTCGAC CTAAGCAACCCGTAG TERM 3313 4371540 - 4371515 - R 79 -14.7 -2.93073 | overlap 4371512 4371517 GCGGGGGAATAAGGA GAGCGGCCACG GTAG CGCAGCCGCTC GACCTAAGCAACCCG Pmen_3998 4372299 - 4371619 - | phosphoglycolate phosphatase Pmen_3999 4372970 - 4372296 - | ribulose-phosphate 3-epimerase TERM 3314 4373075 - 4373100 + r 93 -17.5 -3.37959 | opp_overlap 4373075 CGCCTCACAGCAAAA GGCCCCGCCGG TTAC CCGGCGAGGCC TTGGTCTTGCAGTTG TERM 3315 4373100 - 4373075 - R 100 -19.7 -4.34402 | opp_overlap 4373075 CGCCTCACAGCAAAA GGCCCCGCCGG TTAC CCGGCGAGGCC TTGGTCTTGCAGTTG Pmen_4000 4373950 - 4373123 - | binding-protein-dependent transport systems inner membrane component TERM 3316 4374084 - 4374104 + r 76 -7.5 -4.56775 | opp_overlap 4374085, overlap 4374043 4374085 4374086 GGAGAGGGTCATCAG ATGGTCTGC TAC GCAGACCGC TTTTTAACCAAGCCT TERM 3317 4374085 - 4374103 + r 72 -11 -3.33744 | opp_overlap 4374085, overlap 4374043 4374084 4374086 GAGAGGGTCATCAGA TGGTCTGC TAC GCAGACCG CTTTTTAACCAAGCC Pmen_4001 4375355 - 4374108 - | binding-protein-dependent transport systems inner membrane component TERM 3318 4375417 - 4375382 - R 88 -7.4 -4.95167 | overlap 4375383 4375386 CAAGCAAGAAGAAAA TTCAGACGGCCCTGCC AACA GGCAGGGCCGGATCGA GTCGCAGAACCTGTT TERM 3319 4375417 - 4375383 - R 70 -10.7 -3.55474 | gap 1, overlap 4375382 4375386 AAGCAAGAAGAAAAT TC-AGACGGCCCTGCC AACA GGCAGGGCCGGATCGA GTCGCAGAACCTGTT TERM 3320 4375413 - 4375386 - R 70 -12.6 -2.88634 | overlap 4375382 4375383 CAAGAAGAAAATTCA GACGGCCCTGCC AACA GGCAGGGCCGGA TCGAGTCGCAGAACC Pmen_4002 4376595 - 4375564 - | extracellular solute-binding protein Pmen_4003 4377746 - 4376649 - | spermidine/putrescine ABC transporter ATPase subunit Pmen_4004 4378677 - 4378048 - | two component LuxR family transcriptional regulator Pmen_4005 4381079 - 4378674 - | multi-sensor signal transduction histidine kinase TERM 3321 4379268 - 4379280 + g 73 -6.2 -4.30576 | overlap 4379266 4379267 GTCATGCACCTCACG GGCG ATGCG CGCC TTTTCCTCCTCACGC TERM 3322 4381499 - 4381489 - g 72 -8.2 -4.11216 | overlap 4381490 CGGCGACGTGGAAAA CGCC GAC GGCG CGGCCGCGGTCGGAC Pmen_4006 4381193 - 4382170 + | hypothetical protein Pmen_4007 4382928 - 4382167 - | heat shock protein DnaJ domain-containing protein Pmen_4008 4383600 - 4382929 - | nucleotidyl transferase TERM 3323 4383196 - 4383182 - G 74 -2.1 -4.77567 | gap 1, opp_overlap 4383190 ATCGCCAGAACAAAA TC-CCC TTGC GGGTGA TGCGCCGGGTTGTCC Pmen_4009 4384622 - 4383597 - | aminoglycoside phosphotransferase Pmen_4010 4384747 - 4387563 + | organic solvent tolerance protein TERM 3324 4387740 - 4387776 + G 100 -20.9 -2.82516 | opp_overlap 4387716 4387724 4387723 GCGGCGGCGCCCTGC CGCCCGAGCACGTGCTG AGC CAGCAGGTGCTCGAGCG TCTGATCATCGAGAA Pmen_4011 4387544 - 4388836 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3325 4388850 - 4388882 + F 85 -15.6 -3.14132 | opp_overlap 4388855 4388857, overlap 4388857 AACAGCCGTTCCGAA CGCAAGAGCCCGGC CCAGC GCCGGGCTTTTTCG TTCCTGGCCCGGCGG TERM 3326 4388857 - 4388875 + F 100 -13.1 -4.90266 | opp_overlap 4388855 4388857, overlap 4388850 GTTCCGAACGCAAGA GCCCGGC CCAGC GCCGGGC TTTTTCGTTCCTGGC TERM 3327 4388875 - 4388857 - f 74 -13.1 -3.14878 | opp_overlap 4388857 4388850, overlap 4388855 GTTCCGAACGCAAGA GCCCGGC CCAGC GCCGGGC TTTTTCGTTCCTGGC pdxA 4388935 - 4389948 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 3328 4390066 - 4390042 - f 71 -5.5 -4.38712 | opp_overlap 4390053, overlap 4390043 4390044 GCCAGCGTCACAAAA TCCGCGCGCGC GAC GCGCGTGCCTA CAGCCGCAGCGTCTT ksgA 4390163 - 4390972 + | dimethyladenosine transferase apaG 4391002 - 4391382 + | ApaG TERM 3329 4391515 - 4391530 + G 78 -6 -4.57755 | overlap 4391519 ACCGCGGCCCGCAGT CGCTGG AAAC CCTGCG TTTTCTCTACTCCAT apaH 4391382 - 4392200 + | diadenosine tetraphosphatase glpE 4392242 - 4392571 + | thiosulfate sulfurtransferase Pmen_4017 4392854 - 4394776 + | putative serine protein kinase, PrkA TERM 3330 4394783 - 4394805 + F 73 -14.1 -2.75712 | opp_overlap 4394777, overlap 4394781 4394800 TCTCAGTAAGCCCTA TCCGGCGCG TAGCC CGCGCCGGG TCATTCGCTGCCTGC Pmen_4018 4394851 - 4396122 + | hypothetical protein Pmen_4019 4396133 - 4397698 + | hypothetical protein Pmen_4020 4397712 - 4398272 + | hypothetical protein TERM 3331 4398437 - 4398401 - g 77 -10 -3.9534 | gap 1 ATGCAGATTTACAAA GTCGGCGGGGCAGTGCG CGAT CGC-CTGCTCGGCCGTC CCGTCAGCGAAGTGG cca 4398386 - 4399618 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase Pmen_4022 4400267 - 4399734 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Pmen_4023 4400614 - 4400258 - | dihydroneopterin aldolase TERM 3332 4401176 - 4401158 - g 83 -16 -3.61398 | CTGGCCTGGCAACAA CCGGCAGC CTT GCTGCCGG CCTGCGTGCTCACCG Pmen_4024 4400681 - 4401259 + | putative glycerol-3-phosphate acyltransferase PlsY Pmen_4025 4402318 - 4401293 - | O-sialoglycoprotein endopeptidase TERM 3333 4402371 - 4402353 - H 71 -6.6 -4.15044 | opp_overlap 4402367, overlap 4402367 GCCGCGTGGAACAAA GGCGCGCA TGA TAAGCGCC GCCCGGCGGAGCGGC TERM 3334 4402367 - 4402392 + H 71 -7.4 -4.18018 | opp_overlap 4402353 4402367 AGGCGCGCATGATAA GCGCCGCCCG GCGGAG CGGCCAGCGC TTTTCGATCAGAGGG TERM 3335 4402610 - 4402597 - g 70 -3.7 -4.56597 | CGCTCCTGCGAAAAA GCCGG TGTA CTGGC TGAAGTTCGTAGCCG rpsU 4402522 - 4402737 + | 30S ribosomal protein S21 TERM 3336 4402759 - 4402778 + F 86 -15 -3.27525 | overlap 4402755 ACGGCAACGCCCGAA TGCCCGGC TCAC GCCGGGCA TTGCATTTGAAAGAC TERM 3337 4402793 - 4402823 + F 85 -5.4 -5.1417 | gap 1, opp_overlap 4402791 4402793 ATTGCATTTGAAAGA CTCCGCCTCGCAC CTTAGC GAGTGAG-CGGAG TTTTTGCTTTTCTAC dnaG 4402883 - 4404874 + | DNA primase Pmen_4028 4404942 - 4406789 + | RNA polymerase sigma factor RpoD TERM 3338 4406822 - 4406793 - f 85 -17.9 -2.50016 | opp_overlap 4406798 4406813, overlap 4406798 CTCGACGAGTAAGAC CAGAACCCCCGGC CCAG GCCGGGGGTTTTG CTTCCAGCTCCCCCC TERM 3339 4406817 - 4406798 - f 93 -16.4 -3.53531 | opp_overlap 4406798 4406813, overlap 4406793 CGAGTAAGACCAGAA CCCCCGGC CCAG GCCGGGGG TTTTGCTTCCAGCTC TERM 3340 4406798 - 4406817 + F 100 -16.4 -4.41494 | opp_overlap 4406798 4406793, overlap 4406813 CGAGTAAGACCAGAA CCCCCGGC CCAG GCCGGGGG TTTTGCTTCCAGCTC TERM 3341 4409424 - 4409465 + G 77 -11.3 -3.87815 | opp_overlap 4409408 4409447, overlap 4409426 4409429 CGCCTGCGCAGCGCG CTGGACGGCTCACGCGCGG AAGA CCGCGCCGGCGCCGTGCTG TTTCTCGACCTCGAC TERM 3342 4409426 - 4409463 + G 74 -12.5 -3.52906 | opp_overlap 4409408 4409447, overlap 4409424 4409429 CCTGCGCAGCGCGCT GGACGGCTCACGCGCGG AAGA CCGCGCCGGCGCCGTGC TGTTTCTCGACCTCG Pmen_4029 4406940 - 4410674 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3343 4410776 - 4410792 + F 100 -15.1 -4.17701 | opp_overlap 4410776 CCCACCACCTTCAAA GCCGCGC ATT GCGCGGC TTTATCATTTCTGCC TERM 3344 4410792 - 4410776 - f 90 -15.1 -3.58343 | opp_overlap 4410776 CCCACCACCTTCAAA GCCGCGC ATT GCGCGGC TTTATCATTTCTGCC Pmen_4030 4410999 - 4411331 + | hypothetical protein TERM 3345 4411473 - 4411490 + F 84 -5.6 -4.91712 | opp_overlap 4411473 4411472 GGCTGCTTGTATAAC TGTAGC CCAAGA GCTACA TTTTTCTGCATTACC Pmen_4031 4411533 - 4411799 + | XRE family transcriptional regulator Pmen_4032 4411796 - 4413130 + | HipA domain-containing protein TERM 3346 4413237 - 4413209 - f 80 -11.8 -3.72695 | overlap 4413188 ATTCGGCTCACCAAA TGAGCCGAATAG ATGCG CTAATCGGCTCA TGAACAAAAGCCGCG TERM 3347 4413258 - 4413247 - f 70 -3.6 -4.71426 | GGCTCATGAACAAAA GCCG CGCT CAGC CCTGCGCAATGCCCC Pmen_4033 4413429 - 4414199 + | NERD domain-containing protein TERM 3348 4414871 - 4414883 + G 73 -6.2 -4.4009 | TCCGATCTATATCCT GGCG TTGCT CGCC TTTTCTCAGATGCAA Pmen_4034 4414352 - 4415752 + | hypothetical protein Pmen_4035 4415749 - 4416729 + | hypothetical protein Pmen_4036 4416852 - 4417949 + | DNA-cytosine methyltransferase TERM 3349 4418171 - 4418187 + F 95 -15.1 -4.04579 | opp_overlap 4418171 CCCACCACCTTCAAA GCCGCGC ACT GCGCGGC TTTCGTATTTCTCGC TERM 3350 4418187 - 4418171 - f 90 -15.1 -3.58343 | opp_overlap 4418171 CCCACCACCTTCAAA GCCGCGC ACT GCGCGGC TTTCGTATTTCTCGC TERM 3351 4418297 - 4418279 - f 78 -10.2 -3.90744 | overlap 4418276 4418280 GGTCGGCTTAAAGAA CCGTCGCG CTT CGCGACGC CAGCAAAGGATGCGC TERM 3352 4418296 - 4418280 - f 75 -13.7 -2.94232 | overlap 4418276 4418279 GTCGGCTTAAAGAAC CGTCGCG CTT CGCGACG CCAGCAAAGGATGCG TERM 3353 4418626 - 4418588 - g 70 -11.6 -3.41527 | opp_overlap 4418590, overlap 4418590 CAATTCCTACTACAA GACCCACGGCACGCCC TTCGAGC GGGCGCGGCGCGGGTT GTTGTCGCGGCCGAC TERM 3354 4418624 - 4418590 - g 75 -14.2 -3.27653 | opp_overlap 4418590, overlap 4418588 ATTCCTACTACAAGA CCCACGGCACGCCC TTCGAGC GGGCGCGGCGCGGG TTGTTGTCGCGGCCG TERM 3355 4418590 - 4418624 + G 74 -9.8 -3.78934 | opp_overlap 4418590 4418588 ATTCCTACTACAAGA CCCACGGCACGCCC TTCGAGC GGGCGCGGCGCGGG TTGTTGTCGCGGCCG Pmen_4037 4418316 - 4419599 + | hypothetical protein Pmen_4038 4419602 - 4420564 + | methyltransferase type 12 Pmen_4039 4421028 - 4420804 - | hypothetical protein TERM 3356 4421628 - 4421597 - g 73 -14.4 -3.10493 | opp_overlap 4421594, overlap 4421610 CGCCGAAGACAGACA CCTGCTGGAGCAAC TGAC GCCGCGCCAGCAGG AGGTGTTGCGGCTGG Pmen_4040 4421145 - 4421795 + | two component LuxR family transcriptional regulator Pmen_4041 4423428 - 4421797 - | integral membrane sensor hybrid histidine kinase Pmen_4042 4423611 - 4423982 + | hypothetical protein Pmen_4043 4425117 - 4424017 - | diguanylate cyclase Pmen_4044 4426500 - 4425205 - | TRAP dicarboxylate transporter, DctM subunit Pmen_4045 4426966 - 4426490 - | tripartite ATP-independent periplasmic transporter DctQ Pmen_4046 4428125 - 4427124 - | TRAP dicarboxylate transporter, DctP subunit Pmen_4047 4428423 - 4429883 + | sigma-54 dependent trancsriptional regulator Pmen_4048 4430311 - 4431696 + | citrate transporter Pmen_4049 4431771 - 4433399 + | propionate CoA-transferase TERM 3357 4433411 - 4433428 + F 100 -10.5 -5.40072 | TTGAGCGTGAAGTTG CGGGCCT GAAC GGGCCCG TTTTTTTGGCCGGCA Pmen_4050 4433541 - 4435853 + | oxidoreductase alpha (molybdopterin) subunit Pmen_4051 4436812 - 4435850 - | agmatinase Pmen_4052 4437940 - 4436867 - | extracellular solute-binding protein TERM 3358 4437999 - 4438017 + r 70 -10.2 -3.54676 | overlap 4437993 GGAGGCTGGGCATGT CGGCATGC TGC GCCTGCCG TTGCTTTGGATAAAT Pmen_4053 4438950 - 4438117 - | AraC family transcriptional regulator TERM 3359 4438311 - 4438297 - G 79 -11.4 -3.85698 | CCCCTCGTGCAGAAA CACCGC GTA GCGGTG CGCTGCCAAACGTTG TERM 3360 4438849 - 4438839 - G 72 -4.6 -4.56597 | overlap 4438841 TGGCGCCGGCAAAAA CCCG CGA CAGG GTGAAGCGCGACAGT TERM 3361 4439474 - 4439488 + G 77 -12.8 -3.72576 | CTGGAGCGCCTCGGC GCGGCC ATC GGCCGC TTTCGTCGGCGCAAC Pmen_4054 4439123 - 4440019 + | LysR family transcriptional regulator Pmen_4055 4440270 - 4440016 - | hypothetical protein Pmen_4056 4440402 - 4440956 + | NADPH-dependent FMN reductase TERM 3362 4441606 - 4441580 - g 70 -10.8 -3.5774 | AGCGAACCGCTGAAA CAGGCAGCGCAG ACG CTGCTCCACCTG ACCCGTCAGCACCGT Pmen_4057 4441061 - 4441636 + | TetR family transcriptional regulator Pmen_4058 4441638 - 4442516 + | alpha/beta hydrolase-like protein TERM 3363 4442583 - 4442558 - T 73 -9.7 -3.86346 | gap 1 GCATGGTGGCAGAAA CGT-TGGTGCGC ACG GCGCACCCTACG GTAGAGCCCGAGGTC Pmen_4059 4444905 - 4442950 - | hypothetical protein TERM 3364 4443856 - 4443823 - G 73 -10.9 -3.65812 | gap 1 GTCGCCCGAATAGAA GGCCAT-GCGCCCGTC CTC GCCGAGCGCCAGGGCC GCGCACTCGCGACTG TERM 3365 4444261 - 4444294 + g 80 -15.3 -3.29144 | GGCCAGCGGTCCGGC CAGGCGCATCGGCGT GAGC ATGCTGATGCGCCGG TTGTAGGGCGAATCC TERM 3366 4444789 - 4444756 - G 80 -13.9 -3.67597 | gap 1 GCCTCCACCGAAGAA GCCC-AGGGCGGCC AGGCCGA GGCCGCCCTTGAGC AGGTTGCGCCGGGTG Pmen_4060 4445764 - 4444973 - | TonB family protein TERM 3367 4445398 - 4445443 + g 72 -11.7 -3.53012 | gap 1, overlap 4445389 4445385 4445386 CACGCTGCTGCGCCT CGCGCTGGCGTTGCTGCTCCTG TTC CAGGCGCTGCTGC-TCGGCGCG TTTGCGCGCCAGGGC Pmen_4061 4446210 - 4445761 - | biopolymer transport protein ExbD/TolR Pmen_4062 4446931 - 4446221 - | MotA/TolQ/ExbB proton channel TERM 3368 4446951 - 4446974 + r 76 -13.8 -3.11951 | overlap 4446949 4446948 GACTCCTTGCTTGCT GCGCCCGCCA TGGG TGGCGGGCAC TCTCTGTATTGCTAC Pmen_4063 4448981 - 4447026 - | 3-phytase TERM 3369 4447992 - 4448049 + g 86 -17.5 -3.30441 | gap 1 CGTCAGCACCGGCAG CGGCCTGGCCAGCG-CCGGCGCGGCCGG TGC CCAGTCGAGCTGGGCGCGGTGCAGGCCG TTATCGCCGCTGATC TERM 3370 4449015 - 4449038 + r 72 -13.8 -2.53263 | TCGGGTCGCCCTGCG CTGCCCGGCG GACG CGCAGGGCAG TGCATTAGAAGTGGG Pmen_4064 4451553 - 4449043 - | TonB-dependent receptor TERM 3371 4450644 - 4450688 + g 77 -12.2 -3.7456 | gap 2, overlap 4450674 4450685 CTTCGCCGCTCTCAC CGGGCAACTGCGCGTCGGCG AACTCGA CGCCGGCG-GC-GTTGCGCG TTTCCGTGTCCTTGT TERM 3372 4452443 - 4452427 - g 72 -13.7 -3.03771 | GCAGAGCCGCGAAGA GGGCCAG CCG CTGGCCC TGGCAATTCTCGATC Pmen_4065 4451906 - 4452823 + | diguanylate cyclase Pmen_4066 4452834 - 4453865 + | AraC family transcriptional regulator TERM 3373 4453984 - 4453969 - f 100 -11.8 -5.55855 | CCCAAAAAAAGAAAA CCCCGC GATT GCGGGG CCTTGCAGACTGTTG Pmen_4067 4454269 - 4454928 + | endonuclease I Pmen_4068 4455809 - 4455057 - | GntR family transcriptional regulator TERM 3374 4456183 - 4456157 - R 85 -13 -3.73224 | opp_overlap 4456144 4456157, overlap 4456141 4456142 GTAGCCCGGATGAAA TCCGGGGCCTCA TAT CAAAGCCCCGGA TTCGTTCTCAGCCTA Pmen_4069 4457726 - 4456191 - | histidine ammonia-lyase Pmen_4070 4459505 - 4457844 - | urocanate hydratase Pmen_4071 4460870 - 4459545 - | nucleoside recognition domain-containing protein TERM 3375 4460523 - 4460511 - G 80 -9.1 -4.1891 | CTTGTCGAACAGAAA CGGCA GCA TGCCG GGCTGATACAGCGCC TERM 3376 4460986 - 4461010 + r 95 -19.3 -3.40299 | GAGCAGGTGGATCAG CCGCGCCGCCA CCT TGGCGGTGCGG TTGTCGATGTCGTAG Pmen_4072 4461897 - 4460962 - | formiminoglutamase Pmen_4073 4463104 - 4461887 - | imidazolonepropionase TERM 3377 4463101 - 4463118 + g 73 -6.3 -4.41422 | gap 1, overlap 4463105 AAGTTGATTGCGTCG GCATGGGA TTC TCCC-TGC TTGTTTTGTATATAC Pmen_4074 4463332 - 4463925 + | hypothetical protein Pmen_4075 4464005 - 4465165 + | Na+/Pi-cotransporter Pmen_4076 4465185 - 4465412 + | hypothetical protein TERM 3378 4466173 - 4466193 + G 72 -8.9 -4.0641 | opp_overlap 4466166 GCGCAGAACCGCTAC CAGCCGCTG ACC CGGCCGCTG TTTCTCTACGTCAGC Pmen_4077 4465417 - 4466358 + | phosphate binding protein Pmen_4078 4467335 - 4466403 - | hypothetical protein TERM 3379 4467099 - 4467074 - G 70 -13.3 -3.01712 | opp_overlap 4467080 CGCGGCCCTCGAACA GCACCACCACC TTGA GGTGGTTGTGC ACCACCCAGTCCTGC TERM 3380 4467607 - 4467586 - R 100 -14.4 -4.27316 | opp_overlap 4467586 GCCCTGAACGCAAAA GCCCCGGC ACTGGG GCCGGGGC TTTCGGGTGGTGCCG TERM 3381 4467586 - 4467607 + r 90 -14.4 -3.62096 | opp_overlap 4467586 GCCCTGAACGCAAAA GCCCCGGC ACTGGG GCCGGGGC TTTCGGGTGGTGCCG Pmen_4079 4469408 - 4467630 - | acyl-CoA dehydrogenase domain-containing protein Pmen_4080 4470893 - 4469574 - | diguanylate cyclase TERM 3382 4470991 - 4470960 - R 100 -20.2 -4.58395 | opp_overlap 4470963 4470966, overlap 4470963 TGCACGGCGCAAAAA CGACAACGCCGCCC CGAG GGGCGGCGTTGTGG TTCAACCGATCAGGA TERM 3383 4470988 - 4470963 - R 95 -20.5 -3.23975 | opp_overlap 4470963 4470966, overlap 4470960 ACGGCGCAAAAACGA CAACGCCGCCC CGAG GGGCGGCGTTG TGGTTCAACCGATCA TERM 3384 4470963 - 4470988 + r 95 -20.5 -2.71364 | opp_overlap 4470963 4470960, overlap 4470966 ACGGCGCAAAAACGA CAACGCCGCCC CGAG GGGCGGCGTTG TGGTTCAACCGATCA TERM 3385 4470966 - 4470985 + r 93 -16.4 -3.50853 | opp_overlap 4470963 4470960, overlap 4470963 GCGCAAAAACGACAA CGCCGCCC CGAG GGGCGGCG TTGTGGTTCAACCGA Pmen_4081 4472813 - 4471008 - | acyl-CoA dehydrogenase domain-containing protein Pmen_4082 4473718 - 4472984 - | hypothetical protein TERM 3386 4473538 - 4473589 + g 73 -13.7 -3.14132 | gap 1, overlap 4473540 CGGCACGCCCTTCGG TGGCAGGACGA-TCGGCCTCCTCG CGTTC CGAGGCGGCCGAATCCGCCTGCTG TTCCTGAGCAGCGGC TERM 3387 4473540 - 4473587 + g 81 -16.3 -3.13403 | gap 1, overlap 4473538 GCACGCCCTTCGGTG GCAGGACGA-TCGGCCTCCTCG CGTTC CGAGGCGGCCGAATCCGCCTGC TGTTCCTGAGCAGCG Pmen_4083 4474079 - 4473771 - | hypothetical protein bioD 4474865 - 4474179 - | dithiobiotin synthetase Pmen_4085 4476080 - 4475277 - | biotin biosynthesis protein BioC TERM 3388 4475960 - 4476004 + g 70 -10.6 -3.53012 | gap 1, opp_overlap 4475960 GCAGACGCGCCAACA GCTGC-ACGCCGACGCTGCGC TGCA GCTCGGCCACGGCGTCGTAGC TTTCGGCCGCGCGGG Pmen_4086 4476968 - 4476243 - | carboxylesterase Pmen_4087 4478130 - 4476961 - | 8-amino-7-oxononanoate synthase TERM 3389 4477909 - 4477932 + g 70 -3.6 -4.56597 | opp_overlap 4477907, overlap 4477910 GCCGATCACCAGATG CGAGGCGCCG CCGC CGACGCCCCA TTTTTCCGCACCCAG Pmen_4088 4479237 - 4478179 - | biotin synthase Pmen_4089 4479432 - 4479725 + | hypothetical protein Pmen_4090 4479768 - 4480508 + | amidophosphoribosyltransferase-like protein TERM 3390 4480624 - 4480651 + G 70 -13.5 -3.05384 | gap 1, opp_overlap 4480639 GCCCGAAGCGCCTGG CCCTGCTCGAGC AGATC GC-CGAGCAGGG TTCCATCACCCGCGC Pmen_4091 4480569 - 4481333 + | ModE family transcriptional regulator TERM 3391 4481361 - 4481328 - f 72 -12.3 -3.05384 | CTGCTGGGTACGCAA CTGTAGGGCGGGTGC TGCT GCATCCGCCCGACGG CCAGAGCATCGGCCA Pmen_4092 4481411 - 4482385 + | serine/threonine protein kinase Pmen_4093 4482698 - 4483591 + | transporter DMT superfamily protein TERM 3392 4483696 - 4483684 - T 88 -2.6 -5.4833 | TCACTGAACAAAAAA CACC CATCC GGCG CCAGGCCTCGCCAAC TERM 3393 4483848 - 4483807 - T 83 -15.9 -3.05384 | opp_overlap 4483807 4483836, overlap 4483813 TTTTTGGCCAGCCAA TGAAAAGCCCCGGGGCACT AGGC AGTGCGCCGGGACTCCCCA GTTTACCCACAGGCT TERM 3394 4483842 - 4483813 - T 100 -15.7 -4.43477 | opp_overlap 4483807 4483836, overlap 4483807 GCCAGCCAATGAAAA GCCCCGGGGCACT AGGC AGTGCGCCGGGAC TCCCCAGTTTACCCA Pmen_4094 4484402 - 4483884 - | amino acid-binding ACT domain-containing protein Pmen_4095 4484937 - 4484437 - | GCN5-related N-acetyltransferase Pmen_4096 4485243 - 4487420 + | malate synthase G TERM 3395 4487442 - 4487457 + F 80 -11.8 -3.83006 | opp_overlap 4487442 GCCGCCGCAAGAAAA CCGCCC TACG GGGCGG TTATTCATTGCCTCT TERM 3396 4487457 - 4487442 - f 95 -11.8 -4.63218 | opp_overlap 4487442 GCCGCCGCAAGAAAA CCGCCC TACG GGGCGG TTATTCATTGCCTCT Pmen_4097 4487560 - 4489491 + | CBS domain-containing protein TERM 3397 4489591 - 4489606 + G 74 -10.4 -3.80573 | ACATGGACCAGCGCC CGCTGC ATCA GCAGCG TTTCGTCGTGCTCGA Pmen_4098 4489488 - 4490189 + | DNA polymerase III, epsilon subunit Pmen_4099 4491628 - 4490321 - | peptidase U32 Pmen_4100 4492347 - 4491841 - | hypothetical protein TERM 3398 4492391 - 4492367 - R 100 -21.5 -5.00616 | opp_overlap 4492369 GTGTTCCCGAAAAAA GACGGGCCTCC ACT GGAGGCCCGTC TGTAAGACCCTGGAC TERM 3399 4492369 - 4492389 + r 86 -18.3 -2.87564 | opp_overlap 4492367 GTTCCCGAAAAAAGA CGGGCCTCC ACT GGAGGCCCG TCTGTAAGACCCTGG Pmen_4101 4494208 - 4492439 - | Na+/solute symporter Pmen_4102 4494475 - 4494215 - | membrane protein-like protein TERM 3400 4496382 - 4496352 - g 83 -9.6 -4.41494 | overlap 4496353 4496381 TATCGTCAAGGAAAA CGTGCTGACCAGCG ACC CGCTGGATAGCACC CGCAGCATCGCCGCC TERM 3401 4496381 - 4496353 - g 73 -13.1 -3.24414 | overlap 4496352 ATCGTCAAGGAAAAC GTGCTGACCAGCG ACC CGCTGGATAGCAC CCGCAGCATCGCCGC Pmen_4103 4494721 - 4496853 + | TonB-dependent siderophore receptor TERM 3402 4496888 - 4496860 - T 72 -11.7 -3.27704 | opp_overlap 4496866, overlap 4496855 AGTCTGTAAAGCCAA GCGCCAGGTGAAC GCG GTTCACCTGGCTT GCCACCTCGTAGCCC TERM 3403 4496896 - 4496922 + T 100 -21 -2.52464 | CCTGGCTTGCCACCT CGTAGCCCGGAT GCA ATCCGGGCTACG TGCCTTCAGAGCGGG Pmen_4104 4497716 - 4496928 - | hypothetical protein TERM 3404 4498862 - 4498817 - g 80 -9 -4.1822 | gap 2 TTCGACCGCAAGAAA CGCC-TGCTGCCCG-GCTTCCC CAAA GAGATGCGCGAGCATCACGGCG TGTGGACCTACAGCG Pmen_4105 4497929 - 4501036 + | alpha-1,6-glucosidase, pullulanase-type TERM 3405 4501049 - 4501027 - T 89 -11.2 -4.25104 | opp_overlap 4501019 TCTGCCGCAGGAAAA GCGGCGCTAA ACC CTGGCGCCGC TGGCTCGGTATTGGC TERM 3406 4501288 - 4501248 - T 85 -9 -4.67234 | gap 2, overlap 4501239 4501250 ATGCAAGGGCAAAAA CCCGGTTGCCAGCGGTGCGC ACG GCGCACC-CT-ACGACCGCG TAGGGCGGGTGCAAC Pmen_4106 4501708 - 4501406 - | hypothetical protein Pmen_4107 4503100 - 4501757 - | hypothetical protein Pmen_4108 4503373 - 4504794 + | N-acetylglucosamine-binding protein A TERM 3407 4504835 - 4504800 - f 72 -12.6 -3.07935 | gap 1, overlap 4504803 AGCTGACTGAGCCAA GCACCGCGCCAGCCGAA CTG TTTGGCTGGCGCGAC-C ACCCCAATACCCCTG TERM 3408 4504833 - 4504803 - f 84 -17.6 -2.75712 | overlap 4504800 TGACTGAGCCAAGCA CCGCGCCAGCCGAA CTG TTTGGCTGGCGCGA CCACCCCAATACCCC Pmen_4109 4505183 - 4506745 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 3409 4506754 - 4506780 + F 100 -15.9 -4.62783 | gap 1, opp_overlap 4506746 4506747 CGAGTAACTCGCCTG GCCCCGAGGCAG GCAA CTGCC-CGGGGC TTTTTGCCCTGCATA TERM 3410 4508475 - 4508517 + G 71 -14 -2.89177 | opp_overlap 4508468 4508475, overlap 4508462 4508471 CAGGACAACCAGAAA CGCTGGCTGGCCTTCTGCGC CGA GCACGGCATGCCGGTCAGCG TCTGCTATGTGGAGT TERM 3411 4508517 - 4508475 - g 75 -9.6 -4.11281 | opp_overlap 4508462 4508471 4508475, overlap 4508468 CAGGACAACCAGAAA CGCTGGCTGGCCTTCTGCGC CGA GCACGGCATGCCGGTCAGCG TCTGCTATGTGGAGT Pmen_4110 4506900 - 4508543 + | hypothetical protein TERM 3412 4509314 - 4509261 - g 74 -15.2 -3.04144 | gap 1 TCCTCAGCGCCAAGA CCCCGGGGCGGCGCCTGGCGCTGGA CGCCC TGCAGCGCCTG-CGCGACCCCGAGA CGCCGCTGCGGGTGC TERM 3413 4510699 - 4510663 - g 83 -12.2 -4.07568 | opp_overlap 4510693 CCCCGGCCTGCAAAA GGTGGTGCAGGCCGCC GGTCG GGTGATCCGCACCACC GAGGACGAAGGTGTG Pmen_4111 4508540 - 4510840 + | helicase c2 Pmen_4112 4511128 - 4511523 + | hypothetical protein Pmen_4113 4511659 - 4511859 + | hypothetical protein Pmen_4114 4513463 - 4511901 - | transposase IS66 TERM 3414 4512394 - 4512406 + g 72 -6.9 -4.20354 | overlap 4512395 AGGTTCAGCGCCATG TCGGC ACG GCCGG TTTTGCCCTTGGGTT Pmen_4115 4513842 - 4513483 - | IS66 Orf2 family protein Pmen_4116 4513894 - 4514352 + | hypothetical protein Pmen_4117 4514514 - 4514903 + | hypothetical protein TERM 3415 4515245 - 4515224 - g 70 -11.5 -3.35775 | overlap 4515222 AGCACTGGCCAAATA CGGAGCTGG TCAG CCTGCTCCG CTCCACACAGTGGGC Pmen_4118 4514995 - 4515363 + | hypothetical protein Pmen_4119 4517094 - 4515673 - | sensory histidine kinase CreC TERM 3416 4516136 - 4516167 + g 73 -13.8 -3.08471 | gap 1 TCCTCCAGGCCCTGA CG-CTGCTCCACCTG GGC CAGGTGCAGCAGGCG TTCGATGAGGTTCTG Pmen_4120 4517919 - 4517239 - | DNA-binding response regulator CreB TERM 3417 4517535 - 4517549 + g 74 -12.8 -3.53012 | opp_overlap 4517524 GAAAGGCGCTCGCGG CGCCGG CGG CCGGCG TTTCACGCGGCGCCA Pmen_4121 4518502 - 4518062 - | signal-transduction protein Pmen_4122 4520590 - 4518560 - | methyl-accepting chemotaxis sensory transducer TERM 3418 4520664 - 4520652 - R 78 -4.8 -4.7497 | overlap 4520656 TGCACTTAGCAAAAA GCAG GCCCG CTGC CGCCCAACCAGAAGG Pmen_4123 4521264 - 4520752 - | hypothetical protein Pmen_4124 4522583 - 4521465 - | metal dependent phosphohydrolase TERM 3419 4522690 - 4522678 - H 79 -9.1 -4.19624 | CACTCCCAAGAGAAA TGGCC ATA GGCCA GTAGTCGCGATTTTG Pmen_4125 4522761 - 4523651 + | phospholipid/glycerol acyltransferase TERM 3420 4523684 - 4523667 - T 100 -12.7 -5.03994 | GGCCAGACAGAAAAA GGGAGCC CGCA GGCTCCC GAAAAAAGGCGCGGA TERM 3421 4523709 - 4523692 - T 84 -5.5 -5.00884 | AGGCTCCCGAAAAAA GGCGC GGACCAAT GCGCC TAGGCCGTGAAACTG TERM 3422 4523781 - 4523723 - T 77 -14.7 -2.72511 | opp_overlap 4523741, overlap 4523722 CCTAGGCCGTGAAAC TGGCGTTGCCCGGATG-GAGTCCGGGGGA CGC TCCCCGCGACTCTCATCCGGCCAA-GGCA TCAGGCAGCGCTGAA Pmen_4126 4524981 - 4523782 - | alcohol dehydrogenase TERM 3423 4525033 - 4525017 - R 72 -11.5 -3.31726 | overlap 4525015 GTTGTGGACACAAGA CGCGACC GGC GGCCGCG CGGCCTTGCACTGGA Pmen_4127 4526116 - 4525253 - | formyltetrahydrofolate deformylase Pmen_4128 4526885 - 4526256 - | sarcosine oxidase gamma subunit family protein Pmen_4129 4529895 - 4526878 - | sarcosine oxidase alpha subunit family protein TERM 3424 4529542 - 4529519 - G 70 -8.8 -3.96148 | gap 1, opp_overlap 4529540, overlap 4529520 GTCTTGTAGTAGAAA CCG-GGCGGCA TCA TGCCGCCGCCG ACCTTGCCGAGGATG Pmen_4130 4530218 - 4529892 - | sarcosine oxidase delta subunit family protein TERM 3425 4530267 - 4530246 - R 82 -12.9 -3.60792 | CGGTGAATCTTCAAA CCCGCTCGG ATGA CCGCGCGGG GCAAGCTTGTCTCCC TERM 3426 4530280 - 4530301 + r 89 -15.9 -3.29043 | GGGGCAAGCTTGTCT CCCCTCTCC CGGG GGAGAGGGG TTGTGGGAGAGGGTT TERM 3427 4530390 - 4530408 + r 76 -10.2 -3.72576 | overlap 4530391 GAGAGGGTCATCAGC CGTCGCGC TAC GCGCGACC TTTAGTGGGCCACAC TERM 3428 4530391 - 4530407 + r 73 -13.7 -2.83403 | overlap 4530390 AGAGGGTCATCAGCC GTCGCGC TAC GCGCGAC CTTTAGTGGGCCACA Pmen_4131 4531660 - 4530410 - | sarcosine oxidase beta subunit family protein Pmen_4132 4532980 - 4531727 - | serine hydroxymethyltransferase TERM 3429 4533193 - 4533168 - R 89 -16.1 -3.28712 | overlap 4533182 CTTGGCGCCGGATAA CGGCGGGAAGC CAAG GCCCCCCGCCG GGCGCGCCGGGAAGT TERM 3430 4533590 - 4533629 + r 72 -13.4 -2.61548 | gap 1, overlap 4533587 4533588 TGCCTGTGGACATCC GGCG-CCACGCCAGGGCCC ACG GGGCCCCGGCGCGGATGCA TGCGTTCTGCTCAAC Pmen_4133 4533950 - 4533651 - | hypothetical protein TERM 3431 4534144 - 4534165 + H 71 -8.6 -4.07568 | TAAAGTGACCCCTTT GCCGGCAG ATTCGC CGGCCGGC TTTTCAGAAGGAACG TERM 3432 4535130 - 4535147 + G 71 -9.1 -3.83502 | gap 1 CTTCTACACCTTCAT CG-GCGCC GGC GGCGCGCG TTTCATGTGCAGCTG Pmen_4134 4534186 - 4535226 + | L-threonine aldolase Pmen_4135 4536479 - 4535256 - | outer membrane autotransporter Pmen_4136 4537705 - 4536602 - | oxidoreductase FAD-binding subunit Pmen_4137 4538042 - 4539334 + | Rieske (2Fe-2S) domain-containing protein TERM 3433 4539481 - 4539516 + T 95 -20.6 -2.74144 | opp_overlap 4539486, overlap 4539486 AGACAGGCGCCAAGA AAAAAGCCCCGCCAGA TCGC TCTGGCGGGGCTTTTC ATTTCAGCCTGGGGA TERM 3434 4539511 - 4539486 - T 100 -20.5 -5.4505 | opp_overlap 4539481 4539486 GGCGCCAAGAAAAAA GCCCCGCCAGA TCGC TCTGGCGGGGC TTTTCATTTCAGCCT TERM 3435 4539486 - 4539511 + T 100 -20.5 -4.55128 | opp_overlap 4539486, overlap 4539481 GGCGCCAAGAAAAAA GCCCCGCCAGA TCGC TCTGGCGGGGC TTTTCATTTCAGCCT Pmen_4138 4541355 - 4539535 - | GTP-binding protein TypA TERM 3436 4541435 - 4541419 - R 85 -6.5 -4.78753 | overlap 4541421 CGAATATGAAGAAAA CGGGTTC AGC GAACCTG AATGGGCGCGCCTGA Pmen_4139 4542960 - 4541506 - | thiamine biosynthesis protein ThiI Pmen_4140 4543291 - 4544697 + | L-glutamine synthetase TERM 3437 4544758 - 4544732 - f 100 -20.8 -3.53091 | opp_overlap 4544732 ACGGCGCGCTTGAAA GCCCCGCCCGGC TCT GCCTGGCGGGGC TTTTTTCATTTCCCA TERM 3438 4544732 - 4544758 + F 100 -20.8 -5.37593 | opp_overlap 4544732 ACGGCGCGCTTGAAA GCCCCGCCCGGC TCT GCCTGGCGGGGC TTTTTTCATTTCCCA Pmen_4141 4544963 - 4545529 + | hypothetical protein Pmen_4142 4545532 - 4546152 + | hypothetical protein TERM 3439 4546865 - 4546853 - g 74 -10.5 -3.78778 | opp_overlap 4546852 4546856 CCACGAGATCAAGAA CCCGC TCG GCGGG ATTCGTGGCGCCGCC Pmen_4143 4546416 - 4547504 + | PAS/PAC sensor signal transduction histidine kinase Pmen_4144 4547501 - 4548934 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 3440 4548950 - 4548981 + T 93 -16 -3.56099 | opp_overlap 4548950 4548951 4548956, overlap 4548951 4548956 TCCCGCCAGCAGCAA CGAAAAGGGCATCC CGCG GGATGCCCTTTTCA TTTCCCCGGATTGTA TERM 3441 4548981 - 4548950 - T 90 -18.2 -3.21099 | opp_overlap 4548950 4548951 4548956, overlap 4548951 4548956 TCCCGCCAGCAGCAA CGAAAAGGGCATCC CGCG GGATGCCCTTTTCA TTTCCCCGGATTGTA TERM 3442 4548980 - 4548951 - T 88 -19.5 -2.52516 | opp_overlap 4548951 4548950 4548956, overlap 4548950 4548956 CCCGCCAGCAGCAAC GAAAAGGGCATCC CGCG GGATGCCCTTTTC ATTTCCCCGGATTGT TERM 3443 4548951 - 4548980 + T 88 -19.5 -2.73338 | opp_overlap 4548950 4548951 4548956, overlap 4548950 4548956 CCCGCCAGCAGCAAC GAAAAGGGCATCC CGCG GGATGCCCTTTTC ATTTCCCCGGATTGT TERM 3444 4548956 - 4548975 + T 100 -13.6 -4.54727 | opp_overlap 4548951 4548950 4548956, overlap 4548951 4548950 CAGCAGCAACGAAAA GGGCATCC CGCG GGATGCCC TTTTCATTTCCCCGG TERM 3445 4548975 - 4548956 - T 100 -13.6 -4.46615 | opp_overlap 4548956 4548951 4548950, overlap 4548951 4548950 CAGCAGCAACGAAAA GGGCATCC CGCG GGATGCCC TTTTCATTTCCCCGG TERM 3446 4549064 - 4549074 + T 91 -8.2 -4.72986 | opp_overlap 4549063, overlap 4549049 4549063 CGCCGCCCGATCAAC CGCG CTG CGCG TTTTTGATCGAGATC Pmen_4145 4549457 - 4549059 - | TM2 domain-containing protein Pmen_4146 4549605 - 4550816 + | radical SAM domain-containing protein TERM 3447 4551661 - 4551634 - g 81 -10.6 -4.0371 | gap 1, overlap 4551638 CATCGCCCAGATAAA CGA-AGGGGACGC AGC GCGTCCCCCGTCA GGCAGCGTCAGCGGA TERM 3448 4551656 - 4551638 - g 85 -16 -3.65294 | overlap 4551634 GCCCAGATAAACGAA GGGGACGC AGC GCGTCCCC CGTCAGGCAGCGTCA Pmen_4147 4550816 - 4551703 + | hypothetical protein Pmen_4148 4552814 - 4551669 - | twitching motility protein Pmen_4149 4553936 - 4552902 - | twitching motility protein TERM 3449 4554228 - 4554206 - g 83 -12.7 -4.08216 | opp_overlap 4554205 4554204 GGAGGCGCTGGAAAA GCAGGCCGC GCTGA GCGACCTGC CCTTGATCTGGCACT Pmen_4150 4554012 - 4554704 + | alanine racemase domain-containing protein Pmen_4151 4554722 - 4555543 + | pyrroline-5-carboxylate reductase Pmen_4152 4555553 - 4556146 + | protein of unknown function YGGT Pmen_4153 4556151 - 4556447 + | hypothetical protein Pmen_4154 4556684 - 4558666 + | GTPase (dynamin-related)-like protein metX 4558798 - 4559937 + | homoserine O-acetyltransferase Pmen_4156 4559940 - 4560560 + | methionine biosynthesis protein MetW Pmen_4157 4560582 - 4560998 + | hypothetical protein Pmen_4158 4560991 - 4561587 + | putative deoxyribonucleotide triphosphate pyrophosphatase Pmen_4159 4561584 - 4562744 + | coproporphyrinogen III oxidase Pmen_4160 4563009 - 4565255 + | general secretion pathway protein D Pmen_4161 4565499 - 4566167 + | hypothetical protein Pmen_4162 4566205 - 4567995 + | carbohydrate-binding CenC domain-containing protein TERM 3450 4568032 - 4568000 - f 100 -26.4 -2.52464 | CCCGGCTGTAAGCCA GCGCGCCCATGGCC CCAGC GGCCATGGGCGCGC CAACGAGGAACGGTC Pmen_4163 4568048 - 4568581 + | hypothetical protein Pmen_4164 4568835 - 4569158 + | hypothetical protein TERM 3451 4569284 - 4569256 - T 100 -13.9 -5.252 | gap 1, opp_overlap 4569256 CACCGCCATAAAAAA CGCCGCG-CTCC GGTAAA GGAGGCGCGGCG TTTCGTTTGTACCAG TERM 3452 4569256 - 4569284 + T 95 -13.9 -4.13995 | gap 1, opp_overlap 4569256 CACCGCCATAAAAAA CGCCGCG-CTCC GGTAAA GGAGGCGCGGCG TTTCGTTTGTACCAG Pmen_4165 4570662 - 4569319 - | hypothetical protein TERM 3453 4570707 - 4570725 + r 71 -8.1 -4.01025 | gap 1, overlap 4570706 GCGCCGCTATTGTCC GCGC-CCC TGAT GGGTGCGC TTGTCTTTGTTGTGT trmB 4571560 - 4570844 - | tRNA (guanine-N(7))-methyltransferase thiG 4572423 - 4571629 - | thiazole synthase Pmen_4168 4572643 - 4572443 - | thiamine biosynthesis protein ThiS Pmen_4169 4573185 - 4572814 - | hypothetical protein mtgA 4573361 - 4574089 + | monofunctional biosynthetic peptidoglycan transglycosylase Pmen_4171 4574818 - 4574207 - | hypothetical protein TERM 3454 4574860 - 4574843 - R 100 -12.7 -5.4251 | opp_overlap 4574843 TCCAGACAGAAAAAA GCCGCAC CAGG GTGCGGC TTTTCGGGGTAACGG TERM 3455 4574843 - 4574860 + r 89 -12.7 -4.11216 | opp_overlap 4574843 TCCAGACAGAAAAAA GCCGCAC CAGG GTGCGGC TTTTCGGGGTAACGG Pmen_4172 4575735 - 4574881 - | RNA polymerase factor sigma-32 TERM 3456 4575782 - 4575758 - R 76 -10.7 -3.76224 | overlap 4575759 CTCCGATTCACGAAA CTCGCGCAGTG TAG CACTGCGCAAT CAGACGCGGTGCCTG TERM 3457 4575781 - 4575759 - R 75 -14.2 -2.8552 | overlap 4575758 TCCGATTCACGAAAC TCGCGCAGTG TAG CACTGCGCAA TCAGACGCGGTGCCT Pmen_4173 4576864 - 4575848 - | cell division protein FtsX TERM 3458 4576787 - 4576770 - G 72 -8.4 -4.09511 | AACAGGGTGCGAAAA TCCGGC TCGTCC GCCGGA CGATCGACCACCTTG Pmen_4174 4577532 - 4576864 - | cell division ATP-binding protein FtsE TERM 3459 4577459 - 4577446 - G 72 -6.7 -4.23674 | GGTGACGAAGAGAAA TTCGC CGGG GCGAA CGCGGAAGCTCAGCT Pmen_4175 4578956 - 4577529 - | signal recognition particle-docking protein FtsY TERM 3460 4578742 - 4578765 + g 72 -15.2 -2.73483 | GCCACGGGCTCTTCG GGCGCCGCGG CGGG CAGCGGCGCC TGATTGGCGTCCGAT Pmen_4176 4579099 - 4580466 + | peptidase M16 domain-containing protein Pmen_4177 4580463 - 4581923 + | peptidase M16 domain-containing protein TERM 3461 4581973 - 4581947 - g 95 -17.2 -3.85698 | overlap 4581948 CGCGCTCCGCAGAAA CCCGCCGCGGGC AAG GCCCACGGCGGC CAGGGCCAGTTGCGC TERM 3462 4581972 - 4581948 - g 100 -20.7 -2.91276 | overlap 4581947 GCGCTCCGCAGAAAC CCGCCGCGGGC AAG GCCCACGGCGG CCAGGGCCAGTTGCG TERM 3463 4582282 - 4582312 + G 72 -13.3 -3.14944 | gap 2, opp_overlap 4582267, overlap 4582289 GTTGGGCGACGCCCT GCAGCTGCTGGCGCG CCC CGCGCC-GCGGC-GC TTCGATATCGTCCTG Pmen_4178 4581923 - 4582525 + | putative methyltransferase Pmen_4179 4582522 - 4582740 + | hypothetical protein TERM 3464 4582748 - 4582800 + F 95 -20.8 -2.78384 | gap 1, opp_overlap 4582744 GACGCTGAATAGCTC CGTAGCCTGGATGAAATCCAGGGCA ACCA TTCCC-GGATTGCATCCGGGCTACG TCTACTGCCGACGAC Pmen_4180 4582826 - 4583809 + | alpha/beta hydrolase fold Pmen_4181 4584317 - 4583811 - | calcium/calmodulin dependent protein kinase II association-domain-containing protein Pmen_4182 4584481 - 4585650 + | GAF sensor signal transduction histidine kinase Pmen_4183 4585647 - 4586309 + | two component LuxR family transcriptional regulator TERM 3465 4587081 - 4587033 - g 77 -16.1 -2.78384 | overlap 4587061 CGGCGGCCGACGAGA TCGGCCAGCTCGCCG-CCAGCCT GGAAG AGGCCGGGCAGCT-GCTGGCCGA ACGCGAGCGCGCCCT TERM 3466 4587390 - 4587423 + G 71 -14.5 -2.57931 | overlap 4587389 CCAACGTGGTGATCA CCGCGCAGCGTGACG CCAG CGGCACCTTGCGCGG CTTCTCCAAGATCAC Pmen_4184 4586306 - 4588657 + | multi-sensor hybrid histidine kinase TERM 3467 4588808 - 4588834 + G 70 -11.6 -3.39327 | AGGCGCTGGCCCTGT TCAGCAGCTTCG AGC CGGACCTGCTGA TTCTCGATCTGCACA Pmen_4185 4588660 - 4589139 + | response regulator receiver protein Pmen_4186 4589882 - 4589145 - | TetR family transcriptional regulator TERM 3468 4589216 - 4589186 - G 72 -11.9 -3.60627 | gap 2 GCAGGCGATCGTAAA GCGCC-TCGAC-CGC CGC GCGCGCCGAAGGCGC GATATAGCCGCCCTC TERM 3469 4589902 - 4589935 + H 77 -11.7 -3.57561 | TGGCAGGCCTTTGGT TAGGGTGCAGCGAGG ACGG CGTCGCGGCATCCTA TTTGACACATTAGAG Pmen_4187 4590011 - 4591441 + | aldehyde dehydrogenase TERM 3470 4591448 - 4591460 + F 80 -10.5 -4.12188 | opp_overlap 4591447 GTACGCTGAACAACG CGGGC AGC GCCCG TTTTACGCCTGGTGA Pmen_4188 4591484 - 4592029 + | hypothetical protein Pmen_4189 4592133 - 4593746 + | glucose-methanol-choline oxidoreductase Pmen_4190 4593748 - 4594119 + | hypothetical protein TERM 3471 4594347 - 4594322 - g 73 -9.7 -3.95324 | CAGCCCCAAGAAGAA CCCGCTGTTCC CGCT GGAACAACGCG TCGAGCTGGCCCGTG coaD 4594197 - 4594679 + | phosphopantetheine adenylyltransferase TERM 3472 4594825 - 4594804 - f 84 -10.9 -4.12942 | overlap 4594816 TCAAAGTCCGTAAAA TGTCGAAGC CAAC GCCTCGACA GGAGTTGCTCCATGT Pmen_4192 4594837 - 4595088 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3473 4595361 - 4595417 + G 73 -11.3 -3.75024 | opp_overlap 4595320, overlap 4595359 GACGCCGCCGTCGCC GCCAGCGCGGCCCTGGCCGTGGTCG AGCCTTA CGGCTCGGGCCTGGGTGGCGGTGGC TTCTTCCTCCTGCGC Pmen_4193 4595199 - 4596857 + | gamma-glutamyltransferase TERM 3474 4596922 - 4596885 - T 76 -13.5 -3.05463 | gap 1, opp_overlap 4596889 4596889, overlap 4596887 ACCCGCCCTACCGAA CACTGCAGTAGCCCGGAT GCA ATCCGGGCTAC-GCCTTG TGTCAGGAGAGCCGG TERM 3475 4596889 - 4596919 + T 86 -14 -3.48276 | opp_overlap 4596887 4596885, overlap 4596889 GCCCTACCGAACACT GCAGTAGCCCGGAT GCA ATCCGGGCTACGCC TTGTGTCAGGAGAGC TERM 3476 4596889 - 4596918 + T 83 -17.3 -2.68823 | gap 1, opp_overlap 4596887 4596885, overlap 4596889 GCCCTACCGAACACT GCAGTAGCCCGGAT GCA ATCCGGGCTAC-GC CTTGTGTCAGGAGAG Pmen_4194 4598766 - 4596925 - | Na+/Pi-cotransporter TERM 3477 4598833 - 4598800 - R 100 -28.3 -3.84451 | GTGTTCAAACGCAAA CGGCCTCTCGCCTCC GTGG GGAGGCGAGAGGCCG CGACGAACCGATTAC Pmen_4195 4599193 - 4598855 - | hypothetical protein Pmen_4196 4599848 - 4599270 - | phospholipid/glycerol acyltransferase TERM 3478 4599882 - 4599922 + r 100 -14.5 -4.62471 | TTCTTGTTTTTATGC CGGAGGGCGGGCAACCCGC CCT GAGGGTCGCCCGTCAGCCG TTTTTCAACGTTGAC Pmen_4197 4600739 - 4599927 - | formamidopyrimidine-DNA glycosylase TERM 3479 4600773 - 4600761 - R 70 -3.3 -4.7173 | overlap 4600763 TACGACAGGCAAAAA CAGCG GTG CGCCA CCTTAGCAGGAGCGG Pmen_4198 4601709 - 4600843 - | putative signal transduction protein Pmen_4199 4601845 - 4603044 + | SAM-dependent methyltransferase TERM 3480 4603353 - 4603379 + F 90 -14.5 -3.60839 | gap 1, opp_overlap 4603352 4603351 4603349 4603347, overlap 4603349 4603341 CCAGCGAAACAGAGC GCCAG-CGACCC ACCC GGGTCGTCTGGC TTGCTTATTGCTTTT TERM 3481 4604174 - 4604147 - g 74 -12.6 -3.61398 | opp_overlap 4604144 CGCCGTGTTCAACAA CGGCGTGGTGCA GCAG TGCGCCGCGCCG CACGTGCTCTACGAA Pmen_4200 4603497 - 4604615 + | spermidine/putrescine ABC transporter ATPase subunit Pmen_4201 4604638 - 4605711 + | spermidine/putrescine-binding periplasmic protein-like protein TERM 3482 4605719 - 4605753 + F 74 -11.5 -3.55761 | gap 1, opp_overlap 4605712, overlap 4605721 TGAAGTAAGGGCCAT CGGCTCCCCTCTCCCA CTTG TGGGAGAGG-GAGCTA TTTAGGGGCTCGCTG TERM 3483 4605721 - 4605751 + F 89 -16.3 -3.35597 | gap 1, opp_overlap 4605712, overlap 4605719 AAGTAAGGGCCATCG GCTCCCCTCTCCCA CTTG TGGGAGAGG-GAGC TATTTAGGGGCTCGC Pmen_4202 4605795 - 4607030 + | binding-protein-dependent transport systems inner membrane component Pmen_4203 4607038 - 4607892 + | binding-protein-dependent transport systems inner membrane component Pmen_4204 4608769 - 4607927 - | hypothetical protein Pmen_4205 4609211 - 4611049 + | dihydroxy-acid dehydratase TERM 3484 4611087 - 4611068 - f 85 -12.1 -3.83026 | opp_overlap 4611068 CTGCTGCACACGAAA GCCCGGC CACCGT GCCGGGC TTTTTCTTGCCCACG TERM 3485 4611068 - 4611087 + F 100 -12.1 -5.06414 | opp_overlap 4611068 CTGCTGCACACGAAA GCCCGGC CACCGT GCCGGGC TTTTTCTTGCCCACG Pmen_4206 4611164 - 4611622 + | phosphodiesterase TERM 3486 4611797 - 4611787 - f 81 -8.2 -4.59773 | TTCGACCTTGAAAAA CGCC ATG GGCG AAGCCATCTAGGCAG Pmen_4207 4611860 - 4612387 + | lactoylglutathione lyase TERM 3487 4612433 - 4612400 - T 72 -13.7 -2.52896 | opp_overlap 4612401 TGACGCTCTAACCTA GCGAGGGGCTGCCTC CCGC GAGGCTGCCCCGCGT TCGTTGCAGGGATCA TERM 3488 4612401 - 4612432 + T 93 -17.2 -3.34013 | opp_overlap 4612400 GACGCTCTAACCTAG CGAGGGGCTGCCTC CCGC GAGGCTGCCCCGCG TTCGTTGCAGGGATC Pmen_4208 4613093 - 4612446 - | hypothetical protein Pmen_4209 4613729 - 4613199 - | dihydrofolate reductase Pmen_4210 4613875 - 4615026 + | glycerophosphoryl diester phosphodiesterase Pmen_4211 4615087 - 4616478 + | hypothetical protein TERM 3489 4617681 - 4617670 - g 70 -2.2 -4.57516 | overlap 4617675 AGACTGAAAGGAAAA CTGA AGGG CCAG CGCGAGCTGACCGTC TERM 3490 4617774 - 4617760 - g 81 -12.8 -3.89346 | GCGGCACTGGATAAA CGCGGC CAC GCCGCG ATGGACGCCATCGCC Pmen_4212 4616584 - 4617951 + | GTP-binding protein, HSR1-related thyA 4618849 - 4618055 - | thymidylate synthase Pmen_4214 4619649 - 4618849 - | prolipoprotein diacylglyceryl transferase Pmen_4215 4620442 - 4619660 - | hypothetical protein Pmen_4216 4620643 - 4621389 + | hypothetical protein Pmen_4217 4623830 - 4621551 - | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 3491 4622006 - 4621971 - G 71 -12.5 -3.2794 | opp_overlap 4621981 GCCGACCGAGAGGAA GTCCACCTGGCGCGC CAGCTC GCGCGTCTGGTAGAC CGCCGCCGGGATCTC Pmen_4218 4624328 - 4623849 - | dinucleoside polyphosphate hydrolase TERM 3492 4624583 - 4624598 + G 75 -6.8 -4.37886 | gap 1 CGCGGCCGAGTACCT GGCG-CG CAA CGACGCC TTTTATGCCGACTAC Pmen_4219 4624473 - 4625126 + | HAD family hydrolase Pmen_4220 4625772 - 4625332 - | integral membrane protein-like protein TERM 3493 4625834 - 4625817 - R 86 -12.7 -3.86897 | CGTAGGGTGGATAAA CCGCCAG CGCT CTGGCGG GTCATCCACCCTACC Pmen_4221 4627379 - 4625865 - | threonine dehydratase TERM 3494 4627131 - 4627181 + g 72 -11.6 -3.61398 | overlap 4627106 CTTGGCCGCCAGTGC CAGACCCTGGGCGTGGTTGCCGGC CGA GGCGGTAACCACGCCGCGCGCCAG TTCTTCGGCCGAGAG Pmen_4222 4627535 - 4628644 + | hypothetical protein Pmen_4223 4628666 - 4629379 + | ribose-5-phosphate isomerase A Pmen_4224 4629841 - 4629506 - | hypothetical protein Pmen_4225 4632057 - 4629853 - | heavy metal translocating P-type ATPase TERM 3495 4631867 - 4631846 - G 75 -11.5 -3.727 | TGCAGCAGATTGAAA TGCAGGGCG GCGA CGCCCGGCA GCTTGCCCAGGGCAT Pmen_4226 4632137 - 4632589 + | MerR family transcriptional regulator Pmen_4227 4633510 - 4632599 - | SdiA-regulated domain-containing protein TERM 3496 4633566 - 4633540 - R 100 -18.7 -4.24606 | AACTGACACGGAAAA GCCCGCCACGC TCGAG GCGCGGCGGGC ATACGGACACTTCGA Pmen_4228 4633929 - 4633582 - | hypothetical protein Pmen_4229 4634978 - 4634025 - | SdiA-regulated domain-containing protein Pmen_4230 4635723 - 4635025 - | fumarylacetoacetate (FAA) hydrolase TERM 3497 4635770 - 4635802 + r 72 -11.9 -3.30007 | opp_overlap 4635777, overlap 4635771 GACGCAAGGCCGGAT ACGAAAACGCCCGCT GTC AGCGGGCGTCTACGG TTATGCGAAGATCTT TERM 3498 4635771 - 4635801 + r 78 -15.4 -2.57683 | opp_overlap 4635777, overlap 4635770 ACGCAAGGCCGGATA CGAAAACGCCCGCT GTC AGCGGGCGTCTACG GTTATGCGAAGATCT TERM 3499 4635795 - 4635777 - R 100 -16 -4.34402 | opp_overlap 4635771 4635770 GGCCGGATACGAAAA CGCCCGCT GTC AGCGGGCG TCTACGGTTATGCGA Pmen_4231 4637194 - 4635803 - | FAD linked oxidase domain-containing protein Pmen_4232 4637376 - 4638605 + | D-3-phosphoglycerate dehydrogenase TERM 3500 4638667 - 4638609 - T 95 -20.6 -2.70932 | gap 3, opp_overlap 4638627, overlap 4638627 GTCCTGTTCTAAGCA CGC-CGCCGCACACGAA--AAGGGGAGGC TTCG GCCTCCCCTTTTTTCATGTGCGCCGCGCG CACCTACGACAGATG TERM 3501 4638646 - 4638627 - T 100 -15 -4.34402 | opp_overlap 4638627, overlap 4638609 CGCCGCACACGAAAA GGGGAGGC TTCG GCCTCCCC TTTTTTCATGTGCGC TERM 3502 4638627 - 4638646 + T 100 -15 -5.21709 | opp_overlap 4638627 4638609 CGCCGCACACGAAAA GGGGAGGC TTCG GCCTCCCC TTTTTTCATGTGCGC Pmen_4233 4639211 - 4638720 - | hypothetical protein TERM 3503 4639461 - 4639473 + H 71 -9.1 -3.72576 | GCTGATAAGGAAGGC GTCGC TGC GCGAC TTTCATGCCCACCAG Pmen_4234 4639503 - 4640039 + | hypothetical protein Pmen_4235 4640812 - 4640075 - | 2OG-Fe(II) oxygenase TERM 3504 4640798 - 4640769 - G 95 -15.7 -4.18197 | opp_overlap 4640769 4640768 4640771, overlap 4640771 ACCCGCCACCGAAAA TAGCCGGCCGCAG CGCC CTGCGGGCGGCCA GGATAGTTTGCCAAG TERM 3505 4640796 - 4640771 - G 88 -16.1 -3.69216 | opp_overlap 4640771 4640769 4640768, overlap 4640769 CCGCCACCGAAAATA GCCGGCCGCAG CGCC CTGCGGGCGGC CAGGATAGTTTGCCA TERM 3506 4640819 - 4640829 + H 75 -2.4 -4.89521 | GTTTGCCAAGGAGTT CCCG ATG CGCG TTTTGTTTGCCCTGT Pmen_4236 4640823 - 4641590 + | hypothetical protein TERM 3507 4641646 - 4641634 - T 71 -9.1 -3.73224 | opp_overlap 4641622 GCAGCCTGGAGCAAA GGCGT TCT ACGCC AGCCGCTCGCGCAAA Pmen_4237 4642581 - 4641640 - | lysophospholipase-like protein TERM 3508 4643027 - 4642996 - g 83 -12.2 -4.08216 | TCACGTCGTGCAAAA GCCCGGCAGCCAGG GCCG CCTGCCCGCCGAAC TGGCCGCGCTACAAC Pmen_4238 4642697 - 4643278 + | hypothetical protein Pmen_4239 4644392 - 4643364 - | AraC family transcriptional regulator Pmen_4240 4644506 - 4646884 + | peptidase S45, penicillin amidase TERM 3509 4647096 - 4647106 + TF 75 -8.2 -4.20367 | TGGTACAGGCAGGCC GGGG AAT CCCC TTCTTTATTCGACGC Pmen_4241 4647662 - 4647219 - | hypothetical protein Pmen_4242 4647661 - 4648125 + | RNA methyltransferase TERM 3510 4648210 - 4648170 - TR 100 -16.2 -4.58395 | gap 1, opp_overlap 4648176 4648199 4648209, overlap 4648130 4648176 CGCACCCTGCAAAAA GCAAAACGCCGCGAACCTG TTGC CAGGAACGCGGCGTTT-GC GAGCGGAGCGTCGCT TERM 3511 4648205 - 4648176 - TR 100 -14.9 -4.77757 | opp_overlap 4648176 4648199, overlap 4648170 CTGCAAAAAGCAAAA CGCCGCGAACCTG TTGC CAGGAACGCGGCG TTTGCGAGCGGAGCG TERM 3512 4648176 - 4648205 + Tr 90 -14.9 -3.53012 | opp_overlap 4648176 4648170, overlap 4648199 CTGCAAAAAGCAAAA CGCCGCGAACCTG TTGC CAGGAACGCGGCG TTTGCGAGCGGAGCG Pmen_4243 4648710 - 4648225 - | preprotein translocase subunit SecB TERM 3513 4648458 - 4648483 + g 79 -13.3 -3.63515 | opp_overlap 4648468 CGGCCTGCTGCACTT CGGCGATGAAG GCGA CTTCTTCGCCG TTCTTCACGGTCACC TERM 3514 4648677 - 4648693 + g 73 -13.7 -3.21199 | GGTTCTGCGACTCGG CAGCGGC GGC GCCGCTG TTGGCTTGCTCGGTC Pmen_4244 4648999 - 4648739 - | glutaredoxin 3 Pmen_4245 4649414 - 4649001 - | rhodanese domain-containing protein Pmen_4246 4649562 - 4651094 + | phosphoglyceromutase TERM 3515 4651145 - 4651106 - f 87 -10.6 -4.40572 | opp_overlap 4651113, overlap 4651113 ATAATCGGCAGAAAA CAGGAAACGCCCCGCGCC GTGA GGCCCGGGGCGTTTTTTT TGCCCGGCGGCGCGG TERM 3516 4651113 - 4651138 + F 100 -17.5 -5.75342 | opp_overlap 4651106 4651113 GCAGAAAACAGGAAA CGCCCCGCGCC GTGA GGCCCGGGGCG TTTTTTTTGCCCGGC TERM 3517 4651138 - 4651113 - f 100 -17.5 -4.10958 | opp_overlap 4651113, overlap 4651106 GCAGAAAACAGGAAA CGCCCCGCGCC GTGA GGCCCGGGGCG TTTTTTTTGCCCGGC Pmen_4247 4651202 - 4652452 + | peptidase M23B Pmen_4248 4652499 - 4653815 + | carboxyl-terminal protease TERM 3518 4653838 - 4653857 + T 100 -15 -5.10208 | opp_overlap 4653838 TGGCGCAACGAAAAA GCCCGGAC AACT GTCCGGGC TTTTTCTTGGCCTTA TERM 3519 4653857 - 4653838 - T 100 -15 -4.8622 | opp_overlap 4653838 TGGCGCAACGAAAAA GCCCGGAC AACT GTCCGGGC TTTTTCTTGGCCTTA Pmen_4249 4654728 - 4653973 - | extracellular solute-binding protein TERM 3520 4654828 - 4654856 + r 74 -12.3 -3.13164 | overlap 4654830 TCTGCCATTCCTTGG CAAGCGGCCGGCT CAT GGCCGGCCGCGTA TTCGGTGCTTACAAG TERM 3521 4654830 - 4654854 + r 80 -14.9 -3.12595 | overlap 4654828 TGCCATTCCTTGGCA AGCGGCCGGCT CAT GGCCGGCCGCG TATTCGGTGCTTACA Pmen_4250 4655620 - 4654865 - | amino acid ABC transporter periplasmic protein Pmen_4251 4656439 - 4655705 - | amino acid ABC transporter periplasmic protein Pmen_4252 4657422 - 4656652 - | imidazole glycerol phosphate synthase subunit HisF Pmen_4253 4658232 - 4657495 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 3522 4657759 - 4657740 - G 74 -10 -3.86346 | overlap 4657752 CGATGTCGGTATAAA CGATGGCA GACA CGCCATCG GCTTCGAAGCGCTTG Pmen_4254 4658524 - 4658270 - | hypothetical protein TERM 3523 4658470 - 4658450 - G 73 -9.7 -3.92075 | ACGCTCATCGAGAAA GCGCTGC AGCATTA GCAGCGC GGCCTGCTCCTGGGC hisH 4659162 - 4658524 - | imidazole glycerol phosphate synthase subunit HisH hisB 4659756 - 4659163 - | imidazoleglycerol-phosphate dehydratase Pmen_4257 4659929 - 4661020 + | FAD dependent oxidoreductase TERM 3524 4661597 - 4661584 - g 70 -5.9 -4.1899 | overlap 4661557 4661585 CCAGCCGAGCGAAAA GCCGG CCGG CCAGC CGGTCAAGCTGGATA TERM 3525 4661727 - 4661703 - g 85 -13.5 -4.15006 | ACATCGAGCTGAAAA CCGGCGCCATC CGC GAAGGCGCCAG CATTCCGGTCAAGTT TERM 3526 4663016 - 4662976 - g 73 -13.1 -3.28712 | CGGCGTCGCCCACAA CCCGGACCTCAAGGCCCAG GTG CCGGGCCTGGCGGTCAGCG GCAATGGCGATCTCG Pmen_4258 4661102 - 4663327 + | AsmA family protein TERM 3527 4663380 - 4663346 - g 77 -15.8 -3.07043 | gap 1 CCGAGCAGTTCAACA GCG-CCGTGCTGGCC TGGTAT GACCAGCACGGGCGC AAGGATCTGCCCTGG Pmen_4259 4663324 - 4664391 + | A/G-specific DNA-adenine glycosylase Pmen_4260 4664388 - 4664660 + | hypothetical protein TERM 3528 4664721 - 4664663 - f 100 -19.7 -3.41988 | gap 2, overlap 4664664 GCCGAGCGAATAAGA CGTAGGGTGCGCCGCGCGCACCAGGGC ATCTACA GGGC-GGTGCGCACGGCGCACCCTAC- CCTCACGAACCTAAG TERM 3529 4664721 - 4664664 - f 100 -25.7 -2.64872 | gap 1, overlap 4664663 CCGAGCGAATAAGAC GTAGGGTGCGCCGCGCGCACCAGGGC ATCTACA GGGC-GGTGCGCACGGCGCACCCTAC CCTCACGAACCTAAG TERM 3530 4664901 - 4664926 + F 95 -4.5 -5.72622 | CCACTAATACCGAGA CCCCTGATTCC GCAA GGTTCCAGGGG TTTTTTGTTTCTGGA Pmen_4261 4664986 - 4666680 + | hypothetical protein Pmen_4262 4667548 - 4667090 - | hypothetical protein TERM 3531 4667635 - 4667603 - R 71 -6.4 -4.21974 | gap 1, opp_overlap 4667608 4667609, overlap 4667609 TCATCATTCAATAAA TGAATAT-ACCCCCG CTTC CGGGGATAATTTTCA GTGATTATTGTCGCG TERM 3532 4667628 - 4667609 - R 70 -10 -3.41962 | opp_overlap 4667609 4667608, overlap 4667603 TTCAATAAATGAATA TACCCCCG CTTC CGGGGATA ATTTTCAGTGATTAT Pmen_4263 4668328 - 4667840 - | ribonuclease H TERM 3533 4668015 - 4668033 + g 71 -3 -4.66318 | overlap 4668016 CATAGGTCGCGGTGG TCGACGGG CTT CTTGTCGC TTTTCTTCCAGTCCT Pmen_4264 4669200 - 4668472 - | hypothetical protein Pmen_4265 4669491 - 4669210 - | hypothetical protein TERM 3534 4669728 - 4669712 - R 100 -4.4 -6.11229 | opp_overlap 4669712 ACGAAAACAAAAAAA GCCAAC TAGGT GTTGAC TTTAGAAGAAATCTA TERM 3535 4670115 - 4670094 - R 72 -13.7 -2.62442 | overlap 4670093 4670078 AGGCAACAGACCAAG CCCTCCAGG TTCA CCCGGAGGG TGAGGTGCTGGCCTA Pmen_4266 4670841 - 4670146 - | resolvase domain-containing protein TERM 3536 4671580 - 4671569 - g 77 -3 -4.89567 | GCGCAAAAGATAAAA TTGT TGAA ACAA TTGCCAGTGCTGAAA TERM 3537 4672100 - 4672084 - g 70 -3.6 -4.564 | overlap 4672079 4672085 AATGGGAAAGGAAAA GCGCCA GATAG CGACGC CCTTCGAGCCCTCAC Pmen_4267 4671277 - 4672377 + | hypothetical protein TERM 3538 4672690 - 4672675 - g 75 -3.2 -4.81212 | CTGAGCAGAAGAAAA GCATTG AGCG CAAGGC AAAGGCACTCCGAAC Pmen_4268 4672374 - 4672745 + | hypothetical protein TERM 3539 4672900 - 4672920 + F 100 -10.4 -4.98531 | opp_overlap 4672900 4672894, overlap 4672894 AATAGCAAACGAAGA GCCTCAGC CATGC GCTGGGGC TTTTTGCTTTCCGCC TERM 3540 4673379 - 4673363 - g 78 -13.7 -3.61715 | GAGGGCCGCGAAGAA CGGCGAC CTG GTCGCCG CCGACAACAAGCAGA Pmen_4269 4673130 - 4673903 + | ABC transporter related Pmen_4270 4673919 - 4674671 + | extracellular solute-binding protein Pmen_4271 4674726 - 4675421 + | polar amino acid ABC transporter, inner membrane subunit Pmen_4272 4675418 - 4676188 + | polar amino acid ABC transporter, inner membrane subunit TERM 3541 4677446 - 4677489 + G 79 -2.4 -5.0133 | gap 1, overlap 4677447 4677451 4677452 4677455 TTGCTGCTCGCAGAG CG-CGACGAGGTTGCCCACAG AAG CTGTGGATAACTCTGTTGATG TTTTTTGGGCAAGTG Pmen_4273 4676240 - 4677478 + | hypothetical protein TERM 3542 4677598 - 4677579 - T 80 -3.6 -5.01732 | AAGGCCTTGAAAAAA CAACAAGT TGCG ACTTCTTG TGAGGAGTAGCCCCA TERM 3543 4677831 - 4677856 + T 95 -15.5 -3.82117 | opp_overlap 4677835, overlap 4677835 GCCGGCACCATCTTT CAAAGCCTCGC TCAC GCGGGGCTTTG TCTTTTCTGCGTCAC TERM 3544 4677835 - 4677852 + T 89 -10.5 -4.51238 | opp_overlap 4677835, overlap 4677831 GCACCATCTTTCAAA GCCTCGC TCAC GCGGGGC TTTGTCTTTTCTGCG Pmen_4274 4678209 - 4677868 - | hypothetical protein TERM 3545 4678617 - 4678638 + G 77 -7.9 -4.36903 | CCGCAACCGCTTTCA GCAGCCGAG AGAA CTTGGCCGC TTTCTCTTTCATCGC TERM 3546 4678743 - 4678767 + G 83 -4.9 -4.99435 | overlap 4678744 GGTCAATTCATCACA TGGCAGCTCGA ATA TCTGGCTGTCG TTTTTCCTTGTTCCC Pmen_4275 4678369 - 4679508 + | acyltransferase 3 TERM 3547 4679658 - 4679670 + G 95 -3.3 -5.55769 | opp_overlap 4679658 TGGCATCTTCAGAAT TACCG TGC CGGTC TTTTTTCTTATAAGC Pmen_4276 4679521 - 4680501 + | hypothetical protein Pmen_4277 4681910 - 4680504 - | virulence factor MVIN family protein Pmen_4278 4682738 - 4681917 - | acetyltransferase Pmen_4279 4684177 - 4682735 - | hypothetical protein Pmen_4280 4685277 - 4684174 - | glycosyl transferase, group 1 Pmen_4281 4686485 - 4685268 - | glycosyl transferase, group 1 Pmen_4282 4687828 - 4686494 - | Beta-xylosidase-like protein Pmen_4283 4689008 - 4687818 - | glycosyl transferase, group 1 Pmen_4284 4691002 - 4689008 - | lipopolysaccharide biosynthesis protein TERM 3548 4689650 - 4689640 - G 72 -8.2 -4.07568 | GGCTCTTGGGGAAAA CCCG ACT CGGG TTGAGCGTCGCATGC Pmen_4285 4691790 - 4691023 - | polysaccharide export protein Pmen_4286 4692731 - 4691820 - | glycosyl transferase family protein Pmen_4287 4694188 - 4692731 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 3549 4693841 - 4693809 - G 75 -9.1 -4.06055 | ACCGCGGAAACGAAA GCCTGCTGATCAC GAATCAG GTGATCGGCCGGC AGCACCAGCAACTGC Pmen_4288 4695621 - 4694188 - | sugar transferase Pmen_4289 4696039 - 4697100 + | dTDP-glucose 4,6-dehydratase TERM 3550 4697697 - 4697677 - g 76 -8.9 -4.23892 | GCCAAGGACGTAAAA CCGTCCGCC CGC GGCGAACTG GAAATCACCGACGTC Pmen_4290 4697113 - 4697985 + | glucose-1-phosphate thymidylyltransferase Pmen_4291 4697982 - 4698530 + | dTDP-4-dehydrorhamnose 3,5-epimerase Pmen_4292 4698527 - 4699390 + | dTDP-4-dehydrorhamnose reductase Pmen_4293 4699443 - 4701257 + | integral membrane sensor signal transduction histidine kinase TERM 3551 4701728 - 4701685 - g 72 -15.2 -2.71144 | overlap 4701658 4701695 CATGGCGCTCAACGA CCGCCAGCAACTGGCCGGGC GCCT GGTCGGCCAGTCGCCGGCAA TGCAGCGCCTGCGCG Pmen_4294 4701254 - 4702639 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 3552 4702689 - 4702659 - f 93 -15.5 -3.63968 | gap 2 CGGCAAACCGCCAAA CGCGCTGCCGGCACG CCT CG-GCCGGCAGC-CG GCAGAATGCCACCAA TERM 3553 4702730 - 4702696 - f 72 -11.4 -3.30124 | opp_overlap 4702706, overlap 4702706 4702717 CGGCAGCCGGCAGAA TGCCACCAAGGCCCGT AGA ACGGGCTTTACCGGCA CACCGGCAGCGCGCT TERM 3554 4702706 - 4702720 + F 74 -11.4 -3.53012 | opp_overlap 4702696 4702706 4702717 CAGAATGCCACCAAG GCCCGT AGA ACGGGC TTTACCGGCACACCG Pmen_4295 4702921 - 4703913 + | TRAP dicarboxylate transporter, DctP subunit Pmen_4296 4704050 - 4704679 + | tripartite ATP-independent periplasmic transporter DctQ Pmen_4297 4704676 - 4705956 + | TRAP dicarboxylate transporter, DctM subunit TERM 3555 4706004 - 4706023 + F 100 -12.1 -5.75342 | TTGTGTACCGACTCC GCCCGGC CTGAGT GCCGGGC TTTTTTTTGCGCCGC Pmen_4298 4706133 - 4706816 + | hypothetical protein Pmen_4299 4707280 - 4706813 - | AsnC family transcriptional regulator Pmen_4300 4707408 - 4707734 + | hypothetical protein Pmen_4301 4707832 - 4709616 + | type II secretion system protein E Pmen_4302 4710299 - 4709619 - | hypothetical protein Pmen_4303 4710559 - 4711494 + | SPFH domain-containing protein/band 7 family protein Pmen_4304 4711498 - 4711947 + | hypothetical protein Pmen_4305 4712069 - 4712410 + | hypothetical protein TERM 3556 4712587 - 4712611 + T 100 -20.1 -4.2558 | opp_overlap 4712587 CGCGTTCATAAAAAA TGCCCGCATCC AAT GGATGCGGGCA TTTTCATCAAGCCTC TERM 3557 4712611 - 4712587 - T 100 -20.1 -5.24129 | opp_overlap 4712587 CGCGTTCATAAAAAA TGCCCGCATCC AAT GGATGCGGGCA TTTTCATCAAGCCTC Pmen_4306 4713983 - 4712670 - | outer membrane porin Pmen_4307 4715397 - 4714414 - | diguanylate cyclase with PAS/PAC sensor TERM 3558 4715478 - 4715451 - R 100 -21.4 -3.51934 | opp_overlap 4715455, overlap 4715455 GCTGTTGGACAAAGA CAAAGGCCCGCC GTTC GGCGGGCCTTTG GAGGAAATGCGCAGC TERM 3559 4715474 - 4715455 - R 100 -16.4 -4.40003 | opp_overlap 4715455, overlap 4715451 TTGGACAAAGACAAA GGCCCGCC GTTC GGCGGGCC TTTGGAGGAAATGCG TERM 3560 4715455 - 4715474 + r 93 -16.4 -3.53811 | opp_overlap 4715451 4715455 TTGGACAAAGACAAA GGCCCGCC GTTC GGCGGGCC TTTGGAGGAAATGCG Pmen_4308 4716687 - 4715497 - | fatty acid desaturase TERM 3561 4717367 - 4717409 + G 70 -10.5 -3.73775 | gap 2 ATCGCTGGTTCCACT CGC-GCGGCCGCCTG-TTGCG CGA CGAAGGCGGGCGGCCACAGCG TTTCATCGGCATCGC TERM 3562 4717472 - 4717460 - g 71 -9.1 -3.84246 | opp_overlap 4717452 GCGCCAACGACGAAA GCCTG CGC CAGGC TGCGGCCGTATTCGA Pmen_4309 4716856 - 4719156 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Pmen_4310 4719159 - 4720280 + | response regulator receiver protein TERM 3563 4722354 - 4722338 - g 79 -8.7 -4.36914 | opp_overlap 4722352, overlap 4722344 GCGCGCTGCAGAAAA GCGAAAG CCG CTTCCGC GGCCTGGTGGCCAAC TERM 3564 4722357 - 4722344 - g 73 -9.5 -3.96705 | opp_overlap 4722352, overlap 4722338 TGCAGAAAAGCGAAA GCCGC TTCC GCGGC CTGGTGGCCAACCTG Pmen_4311 4720291 - 4724166 + | PAS/PAC sensor signal transduction histidine kinase Pmen_4312 4724166 - 4726088 + | multi-sensor signal transduction histidine kinase TERM 3565 4726758 - 4726785 + G 85 -10.5 -4.18018 | AGCCACTGGACACGC CCGAGCAGCGC CTGGCC GCGCTGCGTGG TTTTGCCTACAGCCC Pmen_4313 4726085 - 4728982 + | multi-sensor hybrid histidine kinase Pmen_4314 4728975 - 4729361 + | response regulator receiver protein Pmen_4315 4729354 - 4731018 + | response regulator receiver modulated diguanylate cyclase Pmen_4316 4731906 - 4731079 - | sulfate ABC transporter, inner membrane subunit CysW TERM 3566 4731160 - 4731205 + g 73 -10.9 -3.66018 | GAGCAGCGCCATGCA CGCCAGCAGGCCGGCAGCGGT GAAC GCCGCAGCGGGCTTGTAGTCG TTGTTGAGCTGATCG Pmen_4317 4732742 - 4731903 - | sulfate ABC transporter, inner membrane subunit CysT TERM 3567 4731957 - 4731934 - G 72 -13.2 -3.08813 | gap 1 TGCCACGCGAAGATA CGGCCCTGCAG CAC CTGCAGGG-CG AACAGGAGGATCAGC TERM 3568 4732796 - 4732765 - R 82 -10.9 -3.85698 | gap 1, overlap 4732766 4732769 GCTCGGCTCTACAAA TGCAGTTGGCCGCC AATAA GGCGGCCAACGG-A CCAATACGATGCTTA TERM 3569 4732796 - 4732766 - R 70 -12.5 -2.91276 | overlap 4732765 4732769 CTCGGCTCTACAAAT GCAGTTGGCCGCC AATAA GGCGGCCAACGGA CCAATACGATGCTTA TERM 3570 4732793 - 4732769 - R 84 -17.2 -2.70354 | overlap 4732765 4732766 GGCTCTACAAATGCA GTTGGCCGCC AATAA GGCGGCCAAC GGACCAATACGATGC TERM 3571 4732875 - 4732903 + r 74 -13.1 -3.14132 | opp_overlap 4732890 4732891 AGGGTAGGGTGCGCC GCGCGCACCGTGA AAC TCGCAGTGCGTGC TTGGTGCGCACGGCG Pmen_4318 4734014 - 4732998 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 3572 4734230 - 4734194 - R 71 -9.4 -3.76393 | gap 2, overlap 4734195 ACAGGCGAAGGGAAA GGCGCCCTGCCCCGATCA GGC CGACCGGGGC-GG-CGCG AGGGGATCAGAGCTT TERM 3573 4734229 - 4734195 - R 70 -12.9 -2.85354 | gap 2, overlap 4734194 CAGGCGAAGGGAAAG GCGCCCTGCCCCGATCA GGC CGACCGGGGC-GG-CGC GAGGGGATCAGAGCT Pmen_4319 4734509 - 4734237 - | TOBE domain-containing protein ssuB 4735342 - 4734542 - | aliphatic sulfonates transport ATP-binding subunit Pmen_4321 4736133 - 4735339 - | binding-protein-dependent transport systems inner membrane component TERM 3574 4736039 - 4736020 - G 71 -15 -2.57132 | overlap 4736019 4736032 4736035 GGGTGCCGGCAGAAT GCGGCTGG ACAA CCAGCCGC TGGCCACCGCCAGCT TERM 3575 4736083 - 4736032 - G 80 -15.8 -3.29043 | gap 1, opp_overlap 4736082, overlap 4736020 4736019 4736035 AATGCGGCTGGACAA CCAGCCGCTGGCCACCGCCAGCTGC CAG GCAGCCAGCAGCC-CCAGCGGCAAG GCCCAGGGCGCGGCG TERM 3576 4736080 - 4736035 - G 86 -18.3 -2.82623 | gap 1, overlap 4736020 4736019 4736032 GCGGCTGGACAACCA GCCGCTGGCCACCGCCAGCTGC CAG GCAGCCAGCAGCC-CCAGCGGC AAGGCCCAGGGCGCG Pmen_4322 4737520 - 4736372 - | alkanesulfonate monooxygenase Pmen_4323 4738593 - 4737613 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 3577 4738427 - 4738443 + g 74 -12.3 -3.53012 | TCGGCCAGGCGTTTT TCCAGCG CAC CGCTGGA TTTGAGCAGCACCAG Pmen_4324 4739263 - 4738670 - | NAD(P)H-dependent FMN reductase TERM 3578 4738780 - 4738811 + g 100 -18 -4.19238 | overlap 4738810 GTGCTTCGTCGAGGC GCTCGCGCAGCTCG TCGT CGATCTGCGCGGGC TTTTCGCCTTCCGGG Pmen_4325 4739911 - 4739273 - | 1-Cys peroxiredoxin TERM 3579 4739997 - 4739980 - H 78 -4.3 -4.74052 | opp_overlap 4739980 4739980 ACGAAACAAAAAGAA TAAATAA AAAT TTATTTA TAACTTAAAGCTATT Pmen_4326 4740038 - 4740493 + | GCN5-related N-acetyltransferase Pmen_4327 4741822 - 4740488 - | chromate transporter TERM 3580 4741687 - 4741665 - G 93 -11.3 -4.42653 | gap 1, opp_overlap 4741665, overlap 4741682 AGCGCATGCAGAAAA CGCCGCTCGG ACAA CC-AGCGGCG TTTCTCCACCAACTC TERM 3581 4741665 - 4741687 + g 77 -11.3 -3.86015 | gap 1, opp_overlap 4741665 4741682 AGCGCATGCAGAAAA CGCCGCTCGG ACAA CC-AGCGGCG TTTCTCCACCAACTC TERM 3582 4743044 - 4743034 - g 81 -4 -5.09762 | AGCCCAACAGAAAAA TCAA CGA TTGA CTTGCAAAACGCAGA TERM 3583 4743081 - 4743067 - g 75 -2.8 -4.82154 | overlap 4743068 AACGCAGATGAAAAA CCTTTG AAA CAAAGC GAAGAAGCTGAGATA TERM 3584 4743408 - 4743395 - g 83 -2.4 -5.19003 | AATACAAAAAAGAAA TTGC GCTATG GCAA AGAGTCAAAAATGAA Pmen_4328 4742656 - 4744449 + | hypothetical protein TERM 3585 4744722 - 4744706 - T 86 -15.1 -3.3782 | opp_overlap 4744716 GATGGAGCGAACGAA CCCCGGC GAA GCCGGGG CCGGATGGCGGGGCG TERM 3586 4744793 - 4744769 - T 73 -4.2 -4.66537 | gap 1, overlap 4744770 4744773 TTTGCCAAGACAAAA GTGACTCGCCC GAGG GGGCGAAAC-C AGAAACATCGGTCAA TERM 3587 4745051 - 4745034 - T 100 -12.7 -5.71712 | TCGCAGACAAAAAAA TCGGGCC TTAC GGCCCGA AAAAGTACTCCACCT Pmen_4329 4745810 - 4745079 - | ABC transporter related Pmen_4330 4746637 - 4745807 - | binding-protein-dependent transport systems inner membrane component Pmen_4331 4747633 - 4746641 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 3588 4747210 - 4747235 + g 83 -8.2 -4.66833 | opp_overlap 4747210, overlap 4747209 GGAGGAACAGGAAAG GGTCGGTGCC CTTGGT GGCGGCGACC TTTTTACCCTTGAGG TERM 3589 4747460 - 4747477 + g 79 -7.7 -4.56597 | gap 1, overlap 4747470 CCATTTGACGGCGAT GCCCTGCG GCG CG-AGGGC TTTTTCCAGCAAGCC Pmen_4332 4749030 - 4747711 - | outer membrane porin TERM 3590 4749849 - 4749828 - g 77 -5.7 -4.66833 | opp_overlap 4749831, overlap 4749843 CCTCAAGGGCAAAAA GGTCGCCGT GACC AAGGCGGCC GGCGTGCATTACCTG Pmen_4333 4749385 - 4750377 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Pmen_4334 4750374 - 4751603 + | acyl-CoA dehydrogenase type 2 Pmen_4335 4751707 - 4752633 + | rhodanese domain-containing protein TERM 3591 4752807 - 4752778 - f 89 -10.6 -4.67353 | opp_overlap 4752779 4752780, overlap 4752780 TCAGTCACGCAAAAA CACGGCCCCGGC CTAAAC ACCGGGGCCGCT TTCATCATTACGGTC TERM 3592 4752779 - 4752806 + F 80 -11.2 -3.84514 | opp_overlap 4752778 4752780, overlap 4752780 CAGTCACGCAAAAAC ACGGCCCCGG CCTAAACA CCGGGGCCGC TTTCATCATTACGGT TERM 3593 4752805 - 4752780 - f 95 -15.4 -3.95214 | opp_overlap 4752779 4752780, overlap 4752778 AGTCACGCAAAAACA CGGCCCCGGC CTAAAC ACCGGGGCCG CTTTCATCATTACGG TERM 3594 4752780 - 4752805 + F 79 -14.7 -2.90227 | opp_overlap 4752780 4752778, overlap 4752779 AGTCACGCAAAAACA CGGCCCCGG CCTAAACA CCGGGGCCG CTTTCATCATTACGG Pmen_4336 4752837 - 4754021 + | protein of unknown function DUF395, YeeE/YedE Pmen_4337 4755443 - 4754199 - | major facilitator transporter TERM 3595 4756324 - 4756361 + G 71 -12.7 -3.24245 | gap 1, opp_overlap 4756318 4756319, overlap 4756293 4756318 GAGCAGCAACCCTGG CTGGCC-AGCGTTTGGCG ACG CGCCTGACGCTCGGCCAC TTGACTTGTGAGTCA Pmen_4338 4755724 - 4756350 + | methyltransferase type 11 Pmen_4339 4756548 - 4757324 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Pmen_4340 4757390 - 4758070 + | molybdate ABC transporter, inner membrane subunit Pmen_4341 4758070 - 4759194 + | molybdate ABC transporter, ATPase subunit Pmen_4342 4760484 - 4759654 - | sigma-54 factor interaction domain-containing protein TERM 3596 4760565 - 4760541 - R 83 -4.2 -5.15634 | overlap 4760544 TAGTCGAGTAAAAAA GAGCGGGC GGCTGCCTG GCCCGTTC CCGCTCCGAAAGGGT Pmen_4343 4761179 - 4760598 - | hypothetical protein Pmen_4344 4761423 - 4761605 + | hypothetical protein TERM 3597 4762024 - 4762005 - g 75 -9.2 -4.09685 | GCTGATCCCGGAAAA CTGGCAGG AGCG CCTGCCGG ACGCCAGCACCCCCT Pmen_4345 4761697 - 4762695 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 3598 4762702 - 4762759 + F 86 -18.4 -2.78395 | opp_overlap 4762733, overlap 4762739 GCCCATTGATCCGTA GGGTGCGCTGCGCGCACCAGCCGT CAATCGACGC GCAGGTGGTGCGCACGGCGCACCC TACTTCGTACAGGTT TERM 3599 4763506 - 4763545 + G 78 -15 -3.23692 | opp_overlap 4763503 4763500 CCAGTACAACTACGC CGGCGCCACCGCCATCGG CGTG CTGATGCTGGTGGTGTCG TTCATCCTGCTGCTG Pmen_4346 4762781 - 4763599 + | sulfate ABC transporter, inner membrane subunit CysT TERM 3600 4763664 - 4763648 - g 72 -11.5 -3.61715 | overlap 4763649 CAGCGCCGCCAACAA CGCCGCG CGC CGCGGCA ACGCCCTGGGCCGCC Pmen_4347 4763610 - 4764482 + | sulfate ABC transporter, inner membrane subunit CysW Pmen_4348 4764486 - 4765484 + | sulfate ABC transporter, ATPase subunit Pmen_4349 4766026 - 4765625 - | hypothetical protein Pmen_4350 4766150 - 4766944 + | XRE family transcriptional regulator Pmen_4351 4767116 - 4767862 + | hypothetical protein Pmen_4352 4768610 - 4768086 - | hypothetical protein Pmen_4353 4768735 - 4769418 + | CRP/FNR family transcriptional regulator Pmen_4354 4769475 - 4771421 + | hypothetical protein Pmen_4355 4772234 - 4771464 - | 3-hydroxybutyrate dehydrogenase TERM 3601 4772321 - 4772300 - R 100 -12.9 -4.56597 | opp_overlap 4772297 4772314, overlap 4772301 CGCTTGCCGGAAAAA GGCCGGGCC AACT GGCCCGGCA GGGCTTTCACGAGGA TERM 3602 4772320 - 4772301 - R 89 -16.4 -3.33744 | opp_overlap 4772297 4772314, overlap 4772300 GCTTGCCGGAAAAAG GCCGGGCC AACT GGCCCGGC AGGGCTTTCACGAGG Pmen_4356 4773628 - 4772363 - | outer membrane porin TERM 3603 4773838 - 4773870 + r 83 -16.2 -3.06831 | overlap 4773841 GCTGTCCAGGCCGAT GGACGGCGCCGGCC CGGGC GGCCGGCGCCATGC TTCAGTGGCCGTTGC TERM 3604 4773841 - 4773867 + r 79 -16.5 -2.75183 | overlap 4773838 GTCCAGGCCGATGGA CGGCGCCGGCC CGGGC GGCCGGCGCCA TGCTTCAGTGGCCGT Pmen_4357 4775584 - 4773872 - | tannase and feruloyl esterase TERM 3605 4774777 - 4774816 + g 75 -4.9 -4.58395 | overlap 4774780 GCACGCCATCCAGCC CGTCGCAGGCCTGC-AGAG CGGC CTCGAGCAGGGCGGCG-CG TTTTTCCAGGCTGGG Pmen_4358 4777312 - 4775834 - | sigma-54 dependent trancsriptional regulator TERM 3606 4777380 - 4777349 - R 84 -16.7 -2.75712 | gap 1, overlap 4777354 TGATCCAGGTAATGA CGCAA-GCCCTGCC GGGTA GGCAGGGCATTGCG CATGCAGCCATGACG TERM 3607 4777374 - 4777354 - R 78 -14 -3.1364 | overlap 4777349 CAGGTAATGACGCAA GCCCTGCC GGGTA GGCAGGGC ATTGCGCATGCAGCC Pmen_4359 4778770 - 4777397 - | TRAP dicarboxylate transporter, DctM subunit Pmen_4360 4779371 - 4778784 - | tripartite ATP-independent periplasmic transporter DctQ Pmen_4361 4780529 - 4779444 - | TRAP dicarboxylate transporter- DctP subunit TERM 3608 4780789 - 4780750 - R 100 -20.9 -3.65522 | opp_overlap 4780761, overlap 4780729 CAGTTACGCGAAGAA CCCGCCAGACATGTCCA GAAATA CGGACATGTCTGGCGAG GGTGGACAGCCTGAG Pmen_4362 4782608 - 4780878 - | PHB depolymerase family esterase TERM 3609 4782570 - 4782558 - G 75 -4.7 -4.68593 | GGCAGCAGTGAAAAA GCGGC AAA GACGC TGATCCGCCATGCCT Pmen_4363 4784158 - 4782947 - | major facilitator transporter Pmen_4364 4784161 - 4785219 + | LysR family transcriptional regulator Pmen_4365 4786543 - 4785230 - | FAD dependent oxidoreductase Pmen_4366 4788041 - 4786626 - | glutamine synthetase, catalytic region TERM 3610 4787492 - 4787534 + g 73 -9.7 -3.96148 | gap 1 GCCGCGGGCGACCGC CGTCGGCGTCCAGCGCCGGC TGCG GGCGGCCCTGGGCATCG-CG TTTCTGATCGAGCAG Pmen_4367 4790013 - 4788439 - | methyl-accepting chemotaxis sensory transducer Pmen_4368 4791317 - 4790241 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pmen_4369 4792327 - 4791314 - | AraC family transcriptional regulator Pmen_4370 4792431 - 4793489 + | fatty acid desaturase Pmen_4371 4793673 - 4796555 + | diguanylate cyclase/phosphodiesterase Pmen_4372 4797754 - 4796540 - | putative signal transduction protein TERM 3611 4797924 - 4797912 - R 77 -3.3 -5.0133 | opp_overlap 4797893 4797893, overlap 4797913 GAGTTGCGCAAAAAA TTGCG CAG CGCAG GGCCTTGTCAGCCGG TERM 3612 4797990 - 4798009 + r 82 -12.1 -3.61398 | opp_overlap 4797990 AACGGCAACAAAAAA GCCCGCC GGTAAG GGCGGGC TTCTTCGACAGGCAG TERM 3613 4798009 - 4797990 - R 100 -12.1 -5.4756 | opp_overlap 4797990 AACGGCAACAAAAAA GCCCGCC GGTAAG GGCGGGC TTCTTCGACAGGCAG rpmG 4798188 - 4798033 - | 50S ribosomal protein L33 rpmB 4798435 - 4798199 - | 50S ribosomal protein L28 TERM 3614 4800187 - 4800153 - g 71 -12.8 -3.30124 | overlap 4800154 CGCGACGCTGGACAA GCTGATCGCCGATGGC AAG GCCAGCAGCGACCAGG GCGAGCGCAGCCGTC TERM 3615 4800186 - 4800154 - g 77 -16.3 -2.57931 | overlap 4800153 GCGACGCTGGACAAG CTGATCGCCGATGGC AAG GCCAGCAGCGACCAG GGCGAGCGCAGCCGT Pmen_4375 4798780 - 4800357 + | 4-phytase radC 4801085 - 4800411 - | DNA repair protein RadC TERM 3616 4801133 - 4801109 - H 89 -18.5 -3.06183 | opp_overlap 4801109 4801132 TCCATGTCGAGCCAA GCGCCCGCTGC TCC GCTGCGGGCGC TGTGCTATCGTAGCC TERM 3617 4801109 - 4801133 + H 86 -18.5 -2.87468 | opp_overlap 4801109, overlap 4801132 TCCATGTCGAGCCAA GCGCCCGCTGC TCC GCTGCGGGCGC TGTGCTATCGTAGCC Pmen_4377 4801226 - 4802434 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 4802437 - 4802892 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Pmen_4379 4802930 - 4805521 + | phosphomannomutase Pmen_4380 4805546 - 4806451 + | acetylglutamate kinase TERM 3618 4806480 - 4806501 + F 83 -15.9 -3.01712 | GCGGCCATCTGATGG CCCTCTCCC CCCC GGGAGAGGG TATTGCAAGCGCACC Pmen_4381 4806662 - 4807108 + | thioesterase superfamily protein Pmen_4382 4807724 - 4807122 - | hypothetical protein pyrE 4808381 - 4807740 - | orotate phosphoribosyltransferase TERM 3619 4809163 - 4809129 - g 73 -14.3 -3.21099 | gap 1, opp_overlap 4809137 4809139 CGCTTCGACTACCAA CTGCTCACGCCG-GGC ATGC GCCGCAGCGTGCGCAG CGCACGCCTGCCACG Pmen_4384 4808463 - 4809242 + | exodeoxyribonuclease III Xth TERM 3620 4809276 - 4809260 - T 100 -11.5 -5.252 | opp_overlap 4809260 GACCGCTAGAAAAAA GCCGGCA TCG CGCCGGC TTTTTTGTGGCCTGC TERM 3621 4809260 - 4809276 + T 100 -10.8 -5.26316 | opp_overlap 4809260 GACCGCTAGAAAAAA GCCGGC ATCGC GCCGGC TTTTTTGTGGCCTGC TERM 3622 4809339 - 4809349 + T 100 -4.6 -5.96219 | opp_overlap 4809329 AGCGACGTCAAAAAA CGCT CCC GGCG TTTTTTTTGTACCTG Pmen_4385 4809743 - 4809372 - | hypothetical protein rph 4810491 - 4809772 - | ribonuclease PH Pmen_4387 4810666 - 4811529 + | hypothetical protein gmk 4811584 - 4812201 + | guanylate kinase rpoZ 4812296 - 4812559 + | DNA-directed RNA polymerase subunit omega Pmen_4390 4812623 - 4814731 + | (p)ppGpp synthetase I, SpoT/RelA Pmen_4391 4814800 - 4815180 + | endoribonuclease L-PSP TERM 3623 4815187 - 4815208 + F 72 -12.9 -3.09878 | CTCGAATAAGTCCTG CGGCGGGGC AAAC GCCCCGCCC TCTTCCCTCCCTGCC TERM 3624 4815464 - 4815505 + G 78 -15.1 -3.29144 | opp_overlap 4815489 TTCGAACTGGCCGAG GGCCGCCTGCAAGCGGC CGGCGAAA GCCGCTGGCAGGTGACC TTCTACGGCGACTAC Pmen_4392 4815239 - 4815964 + | hypothetical protein Pmen_4393 4816620 - 4816003 - | lysine exporter protein LysE/YggA TERM 3625 4816641 - 4816625 - R 73 -9.4 -3.92592 | AGCGCGAACATGAAA CCTCCG TTTGG CGGAGG CAGTGTCGACAACTG Pmen_4394 4817568 - 4816768 - | AraC family transcriptional regulator Pmen_4395 4818427 - 4817570 - | NAD-dependent epimerase/dehydratase Pmen_4396 4818619 - 4819548 + | LysR family transcriptional regulator Pmen_4397 4819557 - 4821632 + | ATP-dependent DNA helicase RecG Pmen_4398 4821724 - 4823130 + | putative signal transduction protein Pmen_4399 4823954 - 4823199 - | hypothetical protein Pmen_4400 4824417 - 4824022 - | hypothetical protein TERM 3626 4824583 - 4824560 - R 95 -19.6 -3.34233 | opp_overlap 4824553, overlap 4824552 4824551 TGAGAAGCGGGAGAA GCCCGGAGCC GAGC GGCTCCGGGC AGCGGGCTCAGTTGA Pmen_4401 4824863 - 4824591 - | nucleoid protein HU alpha subunit TERM 3627 4824932 - 4824916 - R 72 -11.5 -3.28712 | GCTGTTCTTCCAGAA CAGCGCC TAA GGCGCCG CAACAGCTCTGCGCT Pmen_4402 4826199 - 4825051 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pmen_4403 4826438 - 4826271 - | rubredoxin-type Fe(Cys)4 protein Pmen_4404 4826664 - 4827833 + | choline-glycine betaine transporter-like protein Pmen_4405 4828646 - 4827891 - | hypothetical protein Pmen_4406 4830198 - 4828858 - | hypothetical protein Pmen_4407 4831580 - 4830261 - | PAS/PAC sensor signal transduction histidine kinase Pmen_4408 4832306 - 4831617 - | two component transcriptional regulator ubiA 4833280 - 4832390 - | 4-hydroxybenzoate octaprenyltransferase TERM 3628 4833290 - 4833308 + r 72 -11 -3.28712 | GTACATCGAAGCGTC TCCGTGCA GGT TGCGCGGA TTATAAGGGGAAAAG Pmen_4410 4833936 - 4833385 - | chorismate lyase Pmen_4411 4834467 - 4834021 - | hypothetical protein Pmen_4412 4834742 - 4834464 - | anti-sigma-28 factor, FlgM family protein Pmen_4413 4835244 - 4834819 - | flagellar export protein FliJ Pmen_4414 4836557 - 4835241 - | FliI/YscN family ATPase fliH 4837256 - 4836564 - | flagellar assembly protein H Pmen_4416 4838322 - 4837258 - | flagellar motor switch protein FliG fliF 4839976 - 4838297 - | flagellar MS-ring protein Pmen_4418 4840332 - 4839997 - | flagellar hook-basal body complex subunit FliE TERM 3629 4840242 - 4840211 - G 86 -16.6 -3.53343 | gap 1, opp_overlap 4840204 4840214 4840228 4840228, overlap 4840238 4840239 AAGGCGGCGGCGAAA CCGGC-TTCGCCGGG CTG CCCGGCGAAAGCCTG CGCCGGCTTGATCGG Pmen_4419 4841753 - 4840344 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 3630 4841397 - 4841426 + g 79 -4.7 -4.77036 | opp_overlap 4841396 4841395 4841399, overlap 4841399 CGCCAGCAGATAATC GACGCAGCCCAGC TCGA GCAGCGCCGCGGC TTTTTCCTGATCGGC Pmen_4420 4842103 - 4843068 + | surface presentation of antigens (SPOA) protein Pmen_4421 4843065 - 4843436 + | flagellar motor switch protein FliN fliP 4843436 - 4844188 + | flagellar biosynthesis protein FliP Pmen_4423 4844201 - 4844473 + | export protein FliQ Pmen_4424 4844477 - 4845271 + | flagellar biosynthetic protein FliR flhB 4845264 - 4846397 + | flagellar biosynthesis protein FlhB Pmen_4426 4846401 - 4848497 + | flagellar biosynthesis protein FlhA Pmen_4427 4848953 - 4848612 - | hypothetical protein TERM 3631 4849187 - 4849203 + r 91 -13.7 -3.86346 | opp_overlap 4849182 GCAGACCAACCGTAG GGTGCGC CGC GCGCACC TTTGTAACCGCGTCA TERM 3632 4849306 - 4849273 - R 100 -20.5 -4.09117 | opp_overlap 4849277, overlap 4849277 TCCAGCCACAAAGAA GAAACCCCAGACCTC TTTC GAGATCTGGGGTTTC GTATAGGAGCTTGAC TERM 3633 4849302 - 4849277 - R 100 -15.5 -4.63048 | opp_overlap 4849277, overlap 4849273 GCCACAAAGAAGAAA CCCCAGACCTC TTTC GAGATCTGGGG TTTCGTATAGGAGCT TERM 3634 4849277 - 4849302 + r 91 -13.3 -3.83205 | opp_overlap 4849277 4849273 GCCACAAAGAAGAAA CCCCAGACCTC TTTC GAGATCTGGGG TTTCGTATAGGAGCT Pmen_4428 4856275 - 4855052 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 3635 4855468 - 4855428 - G 78 -6.1 -4.57569 | gap 1, overlap 4855446 TTATTGGTGGAAAAA CGCG-GATCGTCGGCC AAAGCCGGAA GGCCGGCGACCTCGCA GAACTTGCGGAACTG TERM 3636 4856009 - 4856053 + g 74 -7.9 -4.20918 | gap 1, opp_overlap 4856009 4856008 4856011 GACCAGCTCACGAAC CAGTCGCTGCCCTTCAGGCT GGGTGA AGTC-CAGGGTCAGCGACTG TTTGTTGCGATTGGC Pmen_4429 4857510 - 4856332 - | acyl-CoA dehydrogenase domain-containing protein TERM 3637 4857608 - 4857621 + H 95 -6.7 -5.31456 | ACAAACGCAGAATTT GCACA GTCC TGTGC TTTTTTCTCACTTCG Pmen_4430 4857688 - 4858584 + | LysR family transcriptional regulator TERM 3638 4859146 - 4859126 - g 74 -7.6 -4.17556 | gap 1 GAGACCGTCAAGAAA CTGGTCGGC CAAG GCC-ACCAG GTGACCGTCCAGACC Pmen_4431 4859051 - 4860172 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 3639 4860482 - 4860468 - g 79 -3.4 -5.08088 | overlap 4860469 AATGTTCAAGAAAAA GGCGCC GAA AGCGCA GGCGGAGAAACACTG Pmen_4432 4860184 - 4860498 + | NAD/NADP transhydrogenase alpha subunit-like protein Pmen_4433 4860501 - 4861937 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 3640 4861982 - 4861956 - f 70 -12.3 -2.87931 | opp_overlap 4861957 4861961, overlap 4861961 CTGACCGCTCAGACA GGAAACCCGGC TTTGT GCCGGGTTTCT CATATTCGGCAGGCA TERM 3641 4861957 - 4861981 + F 79 -15.8 -2.73875 | opp_overlap 4861956 4861961, overlap 4861961 TGACCGCTCAGACAG GAAACCCGGC TTTGT GCCGGGTTTC TCATATTCGGCAGGC TERM 3642 4861977 - 4861961 - f 78 -10.8 -3.88498 | opp_overlap 4861961 4861957, overlap 4861956 CGCTCAGACAGGAAA CCCGGC TTTGT GCCGGG TTTCTCATATTCGGC TERM 3643 4861961 - 4861977 + F 80 -10.8 -4.06384 | opp_overlap 4861956 4861961, overlap 4861957 CGCTCAGACAGGAAA CCCGGC TTTGT GCCGGG TTTCTCATATTCGGC Pmen_4434 4862295 - 4862510 + | hypothetical protein TERM 3644 4862546 - 4862582 + F 100 -13.1 -4.52589 | opp_overlap 4862551, overlap 4862547 CAAGTTGGGACCTTC TGAAAGCTCCACCGT CTCTGCT GCGGTGGGGCTTTCG TTTTATCTGCAACAG TERM 3645 4862547 - 4862581 + F 86 -14.4 -3.31232 | opp_overlap 4862551, overlap 4862546 AAGTTGGGACCTTCT GAAAGCTCCACCGT CTCTGCT GCGGTGGGGCTTTC GTTTTATCTGCAACA Pmen_4435 4862698 - 4862940 + | hypothetical protein Pmen_4436 4863027 - 4863347 + | hypothetical protein Pmen_4437 4863632 - 4863952 + | hypothetical protein Pmen_4438 4863949 - 4865904 + | hypothetical protein Pmen_4439 4866368 - 4865970 - | glutathione-dependent formaldehyde-activating, GFA Pmen_4440 4866437 - 4867342 + | auxin efflux carrier Pmen_4441 4868155 - 4867376 - | amino acid ABC transporter periplasmic protein Pmen_4442 4868296 - 4869426 + | twitching motility protein TERM 3646 4870019 - 4870037 + G 73 -13.8 -3.08015 | ACGCCGATCACCGAG GCGCGCGG CAT CCGCGTGC TGTTCGCCTCCTTGA Pmen_4443 4869551 - 4871191 + | sodium-dependent inorganic phosphate (Pi) transporter Pmen_4444 4872698 - 4871193 - | xanthine/uracil/vitamin C permease TERM 3647 4872174 - 4872117 - G 70 -11.3 -3.59979 | GGCCGGCAGGCGAAA CGGCATGCTGATGCGCGCCACCA GGCCGACGATGG TGATGGCCAGCACCAGCAGGCCG ATCATGGGGATTTCC TERM 3648 4872813 - 4872784 - R 100 -17.3 -3.96148 | opp_overlap 4872791, overlap 4872785 GCGCTGCACCATAAA CGAACAAGGCAGC CGAA GCTGCCTTGTTCA CGGTCACGATGGGCC TERM 3649 4872812 - 4872785 - R 86 -18.6 -2.97475 | opp_overlap 4872791, overlap 4872784 CGCTGCACCATAAAC GAACAAGGCAGC CGAA GCTGCCTTGTTC ACGGTCACGATGGGC TERM 3650 4872791 - 4872806 + r 73 -10.4 -3.63515 | opp_overlap 4872785 4872784 ACCATAAACGAACAA GGCAGC CGAA GCTGCC TTGTTCACGGTCACG Pmen_4445 4875531 - 4872973 - | TRAP transporter, 4TM/12TM fusion protein TERM 3651 4874691 - 4874725 + g 72 -12.9 -3.21416 | gap 1, opp_overlap 4874717, overlap 4874664 4874692 AGGAGGCCACCTCCA CCGCGCCGGCCTTCTC CGAC GAGAAG-CCGGTGCGC TTCATCATCGGGATG TERM 3652 4874692 - 4874724 + g 77 -16.4 -2.52635 | gap 1, opp_overlap 4874717, overlap 4874664 4874691 GGAGGCCACCTCCAC CGCGCCGGCCTTCTC CGAC GAGAAG-CCGGTGCG CTTCATCATCGGGAT TERM 3653 4875595 - 4875571 - R 93 -15 -3.93782 | gap 1, overlap 4875566 4875564 4875559 4875556 TCAGCGAACAGCAAA GCCCGCG-GCC TTGC GGCGCGCGGGC TGCTCAACTCAAGCG Pmen_4446 4876621 - 4875650 - | TRAP transporter solute receptor TAXI family protein Pmen_4447 4876794 - 4877822 + | AraC family transcriptional regulator Pmen_4448 4877825 - 4878145 + | antibiotic biosynthesis monooxygenase Pmen_4449 4878216 - 4878533 + | hypothetical protein TERM 3654 4878601 - 4878643 + F 100 -26.3 -5.75342 | opp_overlap 4878601 GGCCTGCAAGACAGA GCGCCGCAGCTCGCCATCC ACTCG GGATGGCGCGCCGCGGCGC TTTTTTTTGCGCCGA TERM 3655 4878643 - 4878601 - f 100 -28.5 -3.09273 | opp_overlap 4878601 GGCCTGCAAGACAGA GCGCCGCAGCTCGCCATCC ACTCG GGATGGCGCGCCGCGGCGC TTTTTTTTGCGCCGA Pmen_4450 4878627 - 4880924 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3656 4882059 - 4882084 + G 74 -12.5 -3.62096 | gap 1, overlap 4882060 CCGCCATCGAGGCTG CCCGC-GCCGGC GAG GCCGGCCGCGGC TTTGCCGTGGTGGCC TERM 3657 4882060 - 4882083 + G 75 -16 -2.77043 | gap 1, overlap 4882059 CGCCATCGAGGCTGC CCGC-GCCGGC GAG GCCGGCCGCGG CTTTGCCGTGGTGGC TERM 3658 4882129 - 4882109 - g 72 -14.7 -2.77899 | overlap 4882106 GTGGCCGAGGAAGTA CGCGCGCTG GCG CAGCGCACG CAGGATTCCACCCAG Pmen_4451 4880921 - 4882516 + | methyl-accepting chemotaxis sensory transducer Pmen_4452 4882641 - 4883642 + | luciferase family protein TERM 3659 4884079 - 4884064 - g 78 -10.4 -4.07568 | overlap 4884075 CGCCGCCTTCGAAAA GGCGGT GGAA ACCGCC AAGACCGGCTGTCCG Pmen_4453 4883723 - 4884148 + | OsmC family protein Pmen_4454 4884588 - 4884169 - | hypothetical protein Pmen_4455 4884674 - 4885735 + | aminopeptidase-like protein Pmen_4456 4885799 - 4886029 + | hypothetical protein Pmen_4457 4886760 - 4886113 - | HAD family hydrolase Pmen_4458 4887787 - 4886819 - | hypothetical protein Pmen_4459 4888497 - 4888009 - | GCN5-related N-acetyltransferase Pmen_4460 4889036 - 4888494 - | carbonic anhydrase TERM 3660 4889812 - 4889778 - g 73 -13.4 -3.26947 | CAAGGCGCAGATGAA GCAGGCCGCCGAGGCC AAG GGCCTGGACGGCTGGC TGATCACCCTGGAAT Pmen_4461 4889173 - 4891221 + | oligopeptidase A Pmen_4462 4891218 - 4891505 + | nucleic acid binding protein Pmen_4463 4891532 - 4892620 + | hypothetical protein TERM 3661 4892661 - 4892651 - T 78 -2.4 -5.02074 | CTACTCGCGAAAAAA CTCC CCA GGTG TTGCGCCGAACTGGC Pmen_4464 4893427 - 4892636 - | AraC family transcriptional regulator Pmen_4465 4893509 - 4894510 + | bile acid:sodium symporter Pmen_4466 4894629 - 4895690 + | radical SAM domain-containing protein TERM 3662 4895778 - 4895749 - f 71 -8.5 -4.09685 | CGCGATGTGTTAAAA CATCGCCACTCGA GGCA CCGACCGGCGACG CTCATGACCCGTATC TERM 3663 4896582 - 4896539 - g 76 -8.9 -4.25848 | gap 2, overlap 4896543 4896546 AACTGCTGAGCAAAA GCGAGAAGCCGGTCACCGAAG TGTG CTTCGA-GTCCGGCTTCA-GC AACATCTCCAACTTC Pmen_4467 4895782 - 4896687 + | AraC family transcriptional regulator TERM 3664 4897767 - 4897743 - g 70 -10.7 -3.50853 | overlap 4897760 CGGTTTCAACGAGAA CCTGGCGCTGT TCA ACAGCGGCAAG TGCGCGCTGTGGGTC TERM 3665 4898121 - 4898109 - g 78 -10.5 -4.08216 | GGATTCGCTGCAAAA GGCCG ACC CGGCC GACCCCAGCGCCAAG Pmen_4468 4897003 - 4898313 + | extracellular solute-binding protein TERM 3666 4898500 - 4898538 + G 77 -10.1 -3.96148 | opp_overlap 4898474, overlap 4898515 GCGCAGGTCAGCACG CCAGGCGGGCGCAAGCC CCGGC GTCTGGCGCCGGGCTGG TTTCTGGTCAGCCCC TERM 3667 4899093 - 4899070 - g 70 -11.7 -3.48036 | gap 1, opp_overlap 4899082 CAGGAGCAGAAGGAA GCCGCGCGCC TCGAC GGCGC-CGGC CCCATCGCCATCTTC Pmen_4469 4898452 - 4899387 + | binding-protein-dependent transport systems inner membrane component Pmen_4470 4899398 - 4900231 + | binding-protein-dependent transport systems inner membrane component Pmen_4471 4900244 - 4901347 + | ABC transporter related TERM 3668 4902667 - 4902633 - g 73 -12.1 -3.40403 | gap 1, opp_overlap 4902632 4902659 GGGCGTCGACGAGAA CGGCGCGCACTACCGG ATCG CCGATC-CGCGCGCCG AGTTCTGTCAGGCGC Pmen_4472 4901374 - 4902849 + | fructuronate reductase Pmen_4473 4902853 - 4904352 + | xylulokinase Pmen_4474 4904381 - 4905328 + | ribokinase-like domain-containing protein Pmen_4475 4905508 - 4906236 + | carbonate dehydratase TERM 3669 4906304 - 4906246 - T 84 -16.8 -2.77132 | gap 1, opp_overlap 4906257, overlap 4906245 4906257 GACTGATACAAAGAC TCGCGGCTAAAGCCCCT-CCACGGTCG AGGTGG CTTTTGTGGGAGGGGCTTTAGCCGCGA CGCTCCTCCTGAAGC Pmen_4476 4906656 - 4906354 - | hypothetical protein Pmen_4477 4907599 - 4906658 - | hypothetical protein TERM 3670 4907846 - 4907829 - R 100 -10.5 -5.47218 | GGCCAGTCAAAAAAA GGGAGCC TTGC GGCCCCC GGGACAAAGATGCGC Pmen_4478 4909745 - 4907937 - | pyruvate carboxylase subunit B TERM 3671 4909058 - 4909080 + g 78 -9.8 -4.08692 | CCATGCTGGAGATGG CGGTGTCGAT GCG GTCGGCGCCG TTTTCCACGGCCTTG Pmen_4479 4911177 - 4909762 - | acetyl-CoA carboxylase Pmen_4480 4911330 - 4912292 + | LysR family transcriptional regulator TERM 3672 4912320 - 4912335 + F 70 -3.2 -4.62069 | GGCATAGGGGACATT GGCGAT CTGC ATAGCC TTTTTCCGCTCGCCC TERM 3673 4913016 - 4912994 - g 79 -16.2 -3.01791 | opp_overlap 4912991 4912994 AGTGTTCTGCGAATA CCTGGCGCCG CAG CGGCGCCTGG TGATCTTCGGCGCCG TERM 3674 4912994 - 4913016 + G 77 -16.2 -2.73875 | opp_overlap 4912994, overlap 4912991 AGTGTTCTGCGAATA CCTGGCGCCG CAG CGGCGCCTGG TGATCTTCGGCGCCG Pmen_4481 4912374 - 4913561 + | hypothetical protein TERM 3675 4913718 - 4913750 + T 100 -17 -3.55444 | opp_overlap 4913718 4913724, overlap 4913737 ACCAGCCCCCACAAA CGCAAACGCCCGGG ATTAC CCCGGGCGTTCGTG TTTCCAGCATCGGAC TERM 3676 4913750 - 4913718 - T 100 -17.7 -3.87075 | opp_overlap 4913718 4913737, overlap 4913724 ACCAGCCCCCACAAA CGCAAACGCCCGGGA TTA CCCCGGGCGTTCGTG TTTCCAGCATCGGAC TERM 3677 4913744 - 4913724 - T 95 -16.1 -3.89215 | opp_overlap 4913718 4913737, overlap 4913718 CCCCACAAACGCAAA CGCCCGGGA TTA CCCCGGGCG TTCGTGTTTCCAGCA Pmen_4482 4916010 - 4913767 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Pmen_4483 4916477 - 4916019 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pmen_4484 4916869 - 4916657 - | hypothetical protein TERM 3678 4916964 - 4916946 - R 90 -14.6 -3.41745 | opp_overlap 4916933, overlap 4916959 GGGCGAGAAGATGAA CAGGCGGT GAA ACCGCCTG CACTCAATCCTCGCT Pmen_4485 4917834 - 4916968 - | RpiR family transcriptional regulator TERM 3679 4916997 - 4917032 + g 78 -15.4 -3.08015 | opp_overlap 4916959 TGCGCAGCGACTTGG GCGACAGGCGCAGGCT GCGC AGGCTGCGCTTGACGC TCTTGAGGTGGTTGA TERM 3680 4918021 - 4918008 - H 73 -4.5 -4.63184 | gap 1 AAGTGATCCGAAAAA GC-GCG ATC CGCTGC GGCCGATACGGCTCC Pmen_4486 4918054 - 4919553 + | glucose-6-phosphate 1-dehydrogenase TERM 3681 4919671 - 4919652 - f 76 -6.4 -4.57073 | opp_overlap 4919638, overlap 4919653 4919663 GATGCTGCGCAAAAA GCTGCACA GCAG TGCGCAAC TTGTTGCGCAACAAT Pmen_4487 4919837 - 4920355 + | hypothetical protein TERM 3682 4920380 - 4920411 + F 100 -19.5 -3.53012 | GAGTTCGCGCGTCAC CGCAGCGGCCAGG CATCGT CCTGGCCGTTGCG TTTCGGCAGGCCGCG TERM 3683 4921833 - 4921823 - g 77 -6.8 -4.4648 | overlap 4921824 AGGCTGATGAGAAAA CCAG CTG CTGG CTGCGCGTCAGCTCC Pmen_4488 4920544 - 4922652 + | Rhs element Vgr protein Pmen_4489 4922628 - 4923494 + | hypothetical protein TERM 3684 4925346 - 4925358 + G 75 -4.7 -4.58663 | overlap 4925347 TGGTATTCGGCCCAG GCGCC AGC GGCGG TTTTTCGACCGTGGT Pmen_4490 4923506 - 4925740 + | peptidoglycan-binding LysM TERM 3685 4926419 - 4926408 - g 87 -7.2 -5.06414 | opp_overlap 4926408 4926407 CGTGCGTAACAAAAA CGGG CCGG CCCG CTTGCTCGATGTGCT TERM 3686 4926763 - 4926747 - g 79 -2.9 -5.08601 | opp_overlap 4926748, overlap 4926748 TGACGCCAACAAAAA GCAACTG TTC CAGCTGT TTGCAGATGAGCACC Pmen_4491 4925830 - 4927131 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Pmen_4492 4927132 - 4927488 + | hypothetical protein TERM 3687 4927519 - 4927492 - T 89 -10.6 -4.62069 | opp_overlap 4927484 4927496, overlap 4927493 4927496 GGGCTAGCCTAAAAA GCAAGGGTTCCC AACA GGGAACCCTTAT CTCTTAAAGTTTCTG TERM 3688 4927518 - 4927493 - T 81 -14.1 -3.3692 | opp_overlap 4927484 4927496, overlap 4927492 4927496 GGCTAGCCTAAAAAG CAAGGGTTCCC AACA GGGAACCCTTA TCTCTTAAAGTTTCT TERM 3689 4927515 - 4927496 - T 91 -13.6 -3.81926 | opp_overlap 4927484 4927496, overlap 4927493 4927492 TAGCCTAAAAAGCAA GGGTTCCC AACA GGGAACCC TTATCTCTTAAAGTT TERM 3690 4927496 - 4927515 + T 88 -13.6 -3.6914 | opp_overlap 4927496 4927493 4927492, overlap 4927484 TAGCCTAAAAAGCAA GGGTTCCC AACA GGGAACCC TTATCTCTTAAAGTT Pmen_4493 4928515 - 4927523 - | hypothetical protein Pmen_4494 4929944 - 4928694 - | major facilitator transporter TERM 3691 4929986 - 4929965 - R 80 -10.1 -4.07568 | GCGCTCGCGGCAAAA GCGCAAGCC TAGT GGTTTGCGC CGGTCAGCGGCAATG Pmen_4495 4931143 - 4930091 - | periplasmic solute binding protein Pmen_4496 4931210 - 4931695 + | ferric uptake regulator family protein Pmen_4497 4931692 - 4932480 + | ABC transporter related TERM 3692 4933214 - 4933229 + G 74 -10.4 -3.88985 | opp_overlap 4933189, overlap 4933189 GCCGTCCATCGTGGT CAGCGC CGCG GCGCTG TTTCTGGCCAGTTTT Pmen_4498 4932480 - 4933268 + | ABC-3 protein Pmen_4499 4933328 - 4934239 + | LysR family transcriptional regulator Pmen_4500 4934341 - 4935387 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Pmen_4501 4935384 - 4936079 + | isochorismatase hydrolase TERM 3693 4936202 - 4936213 + G 81 -3.6 -5.01535 | AGTCGTTCGCTTTTC GTGG TCTT CCGC TTTTTCTGGTTCTAC Pmen_4502 4936144 - 4937028 + | TPR repeat-containing protein TERM 3694 4937379 - 4937356 - g 76 -14.6 -3.14132 | gap 1 GCTGCGCCTGATCAA CCGCCTGGAGG AGC CCTCC-GGCGG GCGCATCGAGATCGA Pmen_4503 4937201 - 4938208 + | ABC transporter related Pmen_4504 4938208 - 4938876 + | binding-protein-dependent transport systems inner membrane component TERM 3695 4938893 - 4938879 - f 76 -9.2 -4.05788 | overlap 4938880 TTCCCGTAAATGAAA GCGGCG ACC CGCCAC CCGCGGGACCCGTGC Pmen_4505 4938934 - 4939704 + | NLPA lipoprotein TERM 3696 4939734 - 4939761 + T 100 -17 -4.2828 | CCAAGCTGCACCCGA TGCCGCGCCGCT GCAA AGCCGCGCGGCA TTTTCATGGGTGGAA Pmen_4506 4940438 - 4940040 - | hypothetical protein Pmen_4507 4941021 - 4940431 - | heme oxygenase TERM 3697 4941199 - 4941162 - H 86 -13.3 -3.53012 | GCCGCGTCCCCCAAA CGCTCGGCCATGACGCA TGGC CGGGTCAAGGCCGTGCG CTAGCCACCTCAATT Pmen_4508 4941261 - 4941782 + | ECF subfamily RNA polymerase sigma-24 factor Pmen_4509 4941779 - 4942795 + | putative FecR Pmen_4510 4942902 - 4945505 + | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TERM 3698 4945505 - 4945551 + T 72 -14.2 -2.55606 | overlap 4945504 4945526 4945545 GGTCTGGGACATCTG AGCCTGTCGCTGGCAGCGGCCG CAA CGGCCGCTTCCGGGGCGAGGCG GTTGCTCGTATCTAC Pmen_4511 4946288 - 4945563 - | hypothetical protein Pmen_4512 4949229 - 4946347 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3699 4950889 - 4950922 + G 72 -13.1 -3.15861 | gap 1 GCTCGCCGTCAAGGC GCTGCCCGGCCGTGCC GCC GGCGC-GCTGGGTGGC TTCATCGAGCTGATC uvrD 4949534 - 4951717 + | DNA-dependent helicase II Pmen_4514 4951741 - 4952835 + | TRAP dicarboxylate transporter- DctP subunit TERM 3700 4952846 - 4952863 + F 100 -9.8 -5.07486 | opp_overlap 4952818 4952846 GATGAGCCAACTGAA CGGGGC CGAAAA GCCCCG TTTTTCTTAGGGATA Pmen_4515 4952886 - 4953968 + | TRAP dicarboxylate transporter- DctP subunit Pmen_4516 4954114 - 4954695 + | hypothetical protein Pmen_4517 4954879 - 4955733 + | import inner membrane translocase, subunit Tim44 TERM 3701 4955748 - 4955778 + T 79 -12.1 -3.53012 | gap 1, opp_overlap 4955755, overlap 4955748 4955755 ATCGCGCGGTACCCA T-AAAAAACCCGGG CTTG CCCGGGTTTTTTCA TTTGCAGCCGAGGCC TERM 3702 4955748 - 4955777 + T 73 -13.7 -2.71712 | opp_overlap 4955755, overlap 4955748 4955755 ATCGCGCGGTACCCA TAAAAAACCCGGG CTTG CCCGGGTTTTTTC ATTTGCAGCCGAGGC TERM 3703 4955755 - 4955770 + T 100 -11.8 -5.37593 | opp_overlap 4955755, overlap 4955748 4955748 GGTACCCATAAAAAA CCCGGG CTTG CCCGGG TTTTTTCATTTGCAG TERM 3704 4955770 - 4955755 - T 100 -11.8 -5.28176 | opp_overlap 4955755 4955748 4955748 GGTACCCATAAAAAA CCCGGG CTTG CCCGGG TTTTTTCATTTGCAG Pmen_4518 4956249 - 4955800 - | GCN5-related N-acetyltransferase Pmen_4519 4957568 - 4956249 - | hypothetical protein TERM 3705 4956379 - 4956362 - G 77 -3.3 -4.91109 | overlap 4956363 4956366 GGGGCACCAGAAAAA GCACCAG GGTA CTGGCGG CATGCCGCCCCACCT Pmen_4520 4958020 - 4957571 - | hypothetical protein Pmen_4521 4959692 - 4958022 - | hypothetical protein TERM 3706 4958261 - 4958226 - G 73 -9.7 -3.92075 | gap 1 ATTGGCATCGAGAAA GCGCAGCCGGC-CG AACAACTCG CGCGCCGGCTGCTC GGGCTGCACCACCGC TERM 3707 4958838 - 4958818 - G 73 -6.2 -4.42386 | gap 1, overlap 4958820 TCGGCAGCGAGAAAA TC-CCTGCT CCGC AGCAGGCGA TCCCAGGCGCTGTCA Pmen_4522 4959868 - 4960275 + | hypothetical protein Pmen_4523 4961113 - 4960460 - | GntR family transcriptional regulator Pmen_4524 4961319 - 4962710 + | aminotransferase TERM 3708 4962767 - 4962721 - f 73 -5 -4.59511 | overlap 4962722 4962723 AATAGTCCCGAAAAA TCCTGGGCCGTGCGCACC GTTCCCCTTTT GGTGCGCACGGCGCACCC TACTAGAGACCGCAC Pmen_4525 4962784 - 4964151 + | L-glutamine synthetase Pmen_4526 4965412 - 4964159 - | hypothetical protein TERM 3709 4964242 - 4964204 - G 76 -15.2 -3.14211 | overlap 4964207 ACGCGGCCCGACGAA GCACAGGCGGCCCTGCTC GTC GAGCACGGCCGGCTGCCC CGGGAAGTAGGGATT TERM 3710 4964239 - 4964207 - G 85 -17.7 -2.77899 | overlap 4964204 CGGCCCGACGAAGCA CAGGCGGCCCTGCTC GTC GAGCACGGCCGGCTG CCCCGGGAAGTAGGG Pmen_4527 4966125 - 4965409 - | hypothetical protein Pmen_4528 4966231 - 4966716 + | thioesterase superfamily protein Pmen_4529 4967329 - 4966796 - | hypothetical protein Pmen_4530 4967452 - 4967847 + | hypothetical protein Pmen_4531 4968211 - 4967852 - | hypothetical protein TERM 3711 4968265 - 4968237 - R 95 -11.5 -4.46212 | overlap 4968238 CGCTGCAGCAGAAAA TCGGCCGCCCGCG CCG CGCTGTCGGCCGG CCGCTCCTGCATGAA TERM 3712 4968264 - 4968238 - R 86 -15 -3.27406 | overlap 4968237 GCTGCAGCAGAAAAT CGGCCGCCCGCG CCG CGCTGTCGGCCG GCCGCTCCTGCATGA Pmen_4532 4969093 - 4968215 - | alpha/beta hydrolase fold Pmen_4533 4970104 - 4969130 - | cobalamin synthesis protein, P47K TERM 3713 4969390 - 4969371 - G 70 -10.7 -3.57144 | overlap 4969372 TGCGCCAGGTCGAAA CGCTGGC TCGGAT GCCAGCG CCAGCCGATGCTCCA Pmen_4534 4970200 - 4970550 + | hypothetical protein TERM 3714 4970644 - 4970669 + T 100 -12.5 -5.72207 | overlap 4970646 GATCTCTTGGTGCTT AAGGCCGGGGC AGTC GCTCCGGCCTA TTTTTTTGATTTCGG TERM 3715 4970646 - 4970667 + T 100 -15.1 -4.49088 | overlap 4970644 TCTCTTGGTGCTTAA GGCCGGGGC AGTC GCTCCGGCC TATTTTTTTGATTTC Pmen_4535 4971399 - 4970755 - | hypothetical protein TERM 3716 4971190 - 4971136 - G 77 -11.3 -3.86015 | gap 2 CACGTCGGCGAGAAA GGCG-GCCTGGCCCGGCAGGTCG-GCA TAC TGCGCGACCAGGCCGGCCAGGTTCGGC TCGCTGTCGGCACGC Pmen_4536 4972604 - 4971399 - | cobalamin synthesis protein, P47K Pmen_4537 4973042 - 4972620 - | TraR/DksA family transcriptional regulator TERM 3717 4973068 - 4973082 + H 74 -5.8 -4.55295 | CTGGCTTGTTTCAAT TGTTAT AAC ATAACA TTTATTTCTGACAGC Pmen_4538 4973114 - 4974004 + | putative GTP cyclohydrolase TERM 3718 4974332 - 4974369 + G 71 -9 -3.85817 | gap 1 TTGCTCAGGGTCGAG CAGCAGGGCCCGGCCTG CCACA CCGGGC-GGCCCAGCTG TTTCTACAACGAGCT Pmen_4539 4974008 - 4974427 + | phosphoribosyl-AMP cyclohydrolase TERM 3719 4974564 - 4974544 - g 73 -4 -4.62783 | gap 2, opp_overlap 4974555, overlap 4974547 GAGGCACTGGAAAAA CATGGCCTGC TGC GC-GGCC-TG TGGCTGAGCCTGCGC Pmen_4540 4974424 - 4974669 + | hypothetical protein Pmen_4541 4974662 - 4976002 + | dihydroorotase Pmen_4542 4979495 - 4976091 - | serralysin TERM 3720 4977539 - 4977555 + g 74 -12.3 -3.61398 | TTCCGGTCGCGCTGG CGTCGAG GTT CTCGACG TTATTGGCCAGGGCG TERM 3721 4980107 - 4980073 - g 71 -12.8 -3.31144 | CGGCGAGCTGCACAA CCGCCTGGCCGAGG GCGACAT CTTCGGCCAGGCCG GCCTGCTGCGCGGCA Pmen_4543 4979855 - 4981774 + | CBS domain-containing protein Pmen_4544 4981771 - 4982478 + | DNA polymerase III subunit epsilon Pmen_4545 4982511 - 4982750 + | hypothetical protein Pmen_4546 4983786 - 4982884 - | LysR family transcriptional regulator TERM 3722 4984957 - 4984941 - g 72 -5 -4.48987 | CCTGTACAAGGAAAA CGCCTC GATCA GCGGCG CCGAAGTGGGCTGCC Pmen_4547 4983931 - 4985319 + | L-serine ammonia-lyase TERM 3723 4985360 - 4985340 - T 83 -15.4 -3.05384 | opp_overlap 4985340 GCTCTGCCCACCCAA CGCCCCGG TTGAT CCGGGGCG TTTTCGTTTTTGCCG TERM 3724 4985340 - 4985360 + T 100 -15.4 -4.77757 | opp_overlap 4985340 GCTCTGCCCACCCAA CGCCCCGG TTGAT CCGGGGCG TTTTCGTTTTTGCCG TERM 3725 4985600 - 4985566 - T 100 -18.7 -3.89346 | gap 1, overlap 4985569 GCGCCAGGCCATAAA CGACGACGCCCCGGTC GATC GACCGGGGCGTCAT-G CTGGCAGGCCGTCAG TERM 3726 4985598 - 4985569 - T 100 -21.5 -3.01918 | overlap 4985566 CCAGGCCATAAACGA CGACGCCCCGGTC GATC GACCGGGGCGTCA TGCTGGCAGGCCGTC Pmen_4548 4987305 - 4985650 - | choline/carnitine/betaine transporter Pmen_4549 4988328 - 4987945 - | hypothetical protein Pmen_4550 4989095 - 4988313 - | hypothetical protein Pmen_4551 4989649 - 4989092 - | PAAR repeat-containing protein TERM 3727 4989651 - 4989663 + r 75 -7.7 -4.20367 | GGTTTGCCAGACATG GAGAG TCC CTCTC TTGTTTCTTCCAACC TERM 3728 4990032 - 4990006 - R 82 -12.2 -3.64703 | GGCCGCCCATGCAAA GGCGCGCTGACC AGC GCTCAGCGCGGC TCGCTCATCAGCCCC Pmen_4552 4991690 - 4990023 - | choline/carnitine/betaine transporter TERM 3729 4992402 - 4992424 + G 70 -9.9 -3.75292 | gap 1, overlap 4992402 CGGCGCTGGCCAGCG C-GCAGCAGG TGAT CCTGCTGCAG TTCTTCATCATCCGT cls 4991972 - 4993417 + | cardiolipin synthetase Pmen_4554 4993536 - 4994267 + | hypothetical protein TERM 3730 4994292 - 4994270 - T 90 -14.8 -3.53444 | opp_overlap 4994270 4994280 TCATGGCCTGTGAAA CGCCGCGCAG GCG CTGCTCGGCG AGCAGGCGCGAACGG Pmen_4555 4995461 - 4994250 - | PepSY-associated TM helix domain-containing protein TERM 3731 4995474 - 4995517 + r 88 -13.9 -3.57263 | gap 2, overlap 4995475 4995475 CATCGAATCCTCTCG T-C-GACCGGCAGGGCCGCCC GTGC GGGCGGCCCTGGCCGTCAGTA TTTCCAGGTCAGGGT TERM 3732 4995475 - 4995514 + r 88 -19.2 -2.61695 | overlap 4995474 4995475 ATCGAATCCTCTCGT CGACCGGCAGGGCCGCCC GTGC GGGCGGCCCTGGCCGTCA GTATTTCCAGGTCAG TERM 3733 4995475 - 4995515 + r 95 -19 -3.36515 | gap 1, overlap 4995475 4995474 ATCGAATCCTCTCGT C-GACCGGCAGGGCCGCCC GTGC GGGCGGCCCTGGCCGTCAG TATTTCCAGGTCAGG Pmen_4556 4997674 - 4995512 - | TonB-dependent siderophore receptor Pmen_4557 4998360 - 4997767 - | hypothetical protein TERM 3734 4998365 - 4998339 - G 100 -10.9 -4.75472 | gap 1, opp_overlap 4998339 CGCAGACGAACAAAA CCCCCATA-GGC TCGC GCCGCATGGGGG TTCTCTTCCTTTCCG Pmen_4558 4998832 - 4998425 - | hypothetical protein Pmen_4559 5000856 - 4998829 - | TRAP transporter, 4TM/12TM fusion protein TERM 3735 5001127 - 5001088 - R 86 -17.8 -2.87463 | gap 1, opp_overlap 5001113 5001114 AACGCTGCCGAGACA GCCCACCAGGGCCGTGGCG CCA CGCCACGGCCC-GCCCGGC ATCAGAGCGCGCCGG Pmen_4560 5002082 - 5001129 - | TRAP transporter solute receptor TAXI family protein TERM 3736 5002160 - 5002135 - R 72 -13.2 -2.63596 | TTTCACTCTAGACGA CGCCCGCTGC GGCTAA GCGGCGGGCG ACGCCGGCTGTGCGC Pmen_4561 5003900 - 5002560 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 3737 5003498 - 5003520 + g 73 -13.4 -3.28712 | TACGCCCCTTGTTCG CCACCTGCTG ACG CAGCAGGCGG TTCTCGCAGACCAGG Pmen_4562 5005837 - 5004062 - | integral membrane sensor signal transduction histidine kinase Pmen_4563 5007031 - 5005847 - | cyclopropane-fatty-acyl-phospholipid synthase Pmen_4564 5008139 - 5007117 - | transport system permease protein TERM 3738 5007183 - 5007162 - G 77 -12.3 -3.72324 | gap 1 CAGCGCCACGAAGAA CACC-CCGCC GAT GGCGGCGGTG ACGATGCCGATGGGC Pmen_4565 5009164 - 5008136 - | periplasmic binding protein TERM 3739 5009080 - 5009095 + g 84 -5.4 -4.89567 | CGAGTGTAGGAGCGA GCTTTG CTCG CGAAGC TTTTGTCTTTTCCCA Pmen_4566 5010006 - 5009164 - | ABC transporter related Pmen_4567 5012290 - 5010050 - | TonB-dependent siderophore receptor Pmen_4568 5013444 - 5012719 - | hypothetical protein TERM 3740 5012958 - 5012978 + g 72 -8.9 -4.07568 | overlap 5012943 CCAGCTTGCCAGCGG CCTTGAGCC GCT GGCGCAGGG TTTTCCACAGGCCCA Pmen_4569 5014378 - 5013659 - | cobalt-precorrin-6x reductase TERM 3741 5013906 - 5013869 - G 100 -26.4 -3.81488 | gap 1, opp_overlap 5013868, overlap 5013844 5013870 CTCGTCCAAAGAGAA CGGCCCGCGCGCGCCGA TGATC TCGGCGCGCGCGGGC-G CCGGCTCGGCCTGCA TERM 3742 5013906 - 5013870 - G 100 -26.6 -2.88571 | opp_overlap 5013868, overlap 5013844 5013869 TCGTCCAAAGAGAAC GGCCCGCGCGCGCCGA TGATC TCGGCGCGCGCGGGCG CCGGCTCGGCCTGCA Pmen_4570 5015577 - 5014375 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Pmen_4571 5015944 - 5017353 + | precorrin-3B synthase TERM 3743 5017460 - 5017448 - g 75 -4.7 -4.59773 | opp_overlap 5017448 5017449 GCCGATCTGGAAAAA CTCGC CGT GCGGG TGATTCATGCCTGCG cobH 5017346 - 5017972 + | precorrin-8X methylmutase Pmen_4573 5017972 - 5018712 + | precorrin-2 C(20)-methyltransferase TERM 3744 5018829 - 5018810 - f 73 -4.8 -4.7173 | CAGCACACCTAAAAA GCTTCGCC CCAG GGCGGGGC TCCTACAGGACAAGA TERM 3745 5018873 - 5018931 + F 100 -19.1 -3.55444 | gap 1, opp_overlap 5018891 TTTCACATTCATTCG TTC-GTAGCCCGGATGCAATCCGGGAAA CCCA TTCCCCGGATTGCATCCAAGCTACAGGA TTTACCGCATGAACA Pmen_4574 5018940 - 5020595 + | precorrin-6Y C5,15-methyltransferase (decarboxylating) / precorrin-3 methyltransferase Pmen_4575 5021674 - 5020694 - | transcriptional regulator TERM 3746 5021618 - 5021603 - G 72 -8.2 -4.1552 | CAGCTTGTCAAGAAA GCCGCC GAAC GGCAGC AGGGCGAACTCCGGC Pmen_4576 5021769 - 5022380 + | lysine exporter protein LysE/YggA Pmen_4577 5022962 - 5022393 - | flavin reductase domain-containing protein TERM 3747 5023027 - 5022985 - R 100 -19.3 -4.81249 | gap 1, opp_overlap 5023024 CCTGAAAGCGAAAAA GGCGCCCGC-ATGCTGGCTC GGCT GAACCAGCATCGCAAGCGCC TGCAACAGCGGTTGT Pmen_4578 5023840 - 5023046 - | short-chain dehydrogenase/reductase SDR Pmen_4579 5023930 - 5024841 + | LysR family transcriptional regulator TERM 3748 5025293 - 5025319 + G 70 -13.6 -3.06312 | CAGCATCGGGCTGCT CGCGCCGCTGCT GCT GGCCGTGGCGCG TTGCCTGCAAGGTTT Pmen_4580 5024943 - 5026247 + | major facilitator transporter Pmen_4581 5026415 - 5028571 + | TonB-dependent receptor Pmen_4582 5028571 - 5029083 + | GCN5-related N-acetyltransferase Pmen_4583 5029943 - 5029182 - | precorrin 6A synthase TERM 3749 5029881 - 5029851 - G 73 -14 -3.21099 | opp_overlap 5029841 5029857 CTTGTCCATCAGGAA GATCACGTCGCTGC GGC GCAGCGCCTTGATC GCCTGGTAGGTGATG Pmen_4584 5030581 - 5029940 - | Mg-chelatase subunit ChlD-like protein TERM 3750 5030630 - 5030677 + r 77 -3.4 -5.00616 | gap 2 GAGTCGTCCGGGCCG GTTACGGGCATCCGCGCCAGTG GCTGTG CGC-GG-GCGGATGCTCAGGAC TTTTTTGGCCAACGC Pmen_4585 5031678 - 5030671 - | protoporphyrin IX magnesium-chelatase TERM 3751 5031836 - 5031823 - R 74 -3.7 -4.84761 | ATATCTGCAGAAAAA CTCGG CGCG CCGCG TAACCCACCAGGCGA cobN 5035699 - 5031953 - | cobaltochelatase TERM 3752 5033433 - 5033403 - G 73 -15.5 -2.52896 | opp_overlap 5033403 GTATCGCCGAAGGTA CGCCACAGGCTGT TATCC ACAGCCTGCAGCG CCTGTGGACGCGCCC Pmen_4587 5036840 - 5035791 - | cobalamin biosynthesis protein CobW TERM 3753 5036495 - 5036524 + g 75 -11.4 -3.65529 | AGTTGAAGGCCTGCA CCAGCGGCTTGG GCAGGG CCAGACCGCTGG TTTCGATCAGGATAT TERM 3754 5037629 - 5037591 - g 77 -3.9 -4.82901 | gap 2, opp_overlap 5037595, overlap 5037592 GCTCGGCGAGAAAAA CCGCAG-T-GCCAGCGC CACTTGC GCGCTGGCCACCTTCGA TAGAGAACTTACATG Pmen_4588 5037217 - 5037645 + | cobalamin (vitamin B12) biosynthesis CbiG protein Pmen_4589 5037642 - 5038397 + | precorrin-4 C11-methyltransferase Pmen_4590 5038849 - 5038619 - | hypothetical protein Pmen_4591 5039021 - 5039233 + | hypothetical protein TERM 3755 5039542 - 5039529 - g 77 -8.1 -4.32067 | overlap 5039526 CACCCTAGAAAAGAA CGGCT ACCT AGCCG ACTCGAGCAAGATCT TERM 3756 5039703 - 5039684 - g 79 -11.4 -3.76952 | opp_overlap 5039684 5039682 5039678 GCCATGCAATCGAAA GCCATGCG CGTG CGCACGGC TATTCGGTGGTTCGC Pmen_4592 5039230 - 5039985 + | methionine aminopeptidase, type I TERM 3757 5040257 - 5040226 - T 72 -11.6 -3.2963 | gap 1 ATCATCGGTCTATAA GGCACCGCGCCCGCT GCC AG-GAGCGCAGTACC AGTGAAGATAGGACA Pmen_4593 5041772 - 5040276 - | methylmalonate-semialdehyde dehydrogenase Pmen_4594 5042993 - 5041839 - | iron-containing alcohol dehydrogenase TERM 3758 5042261 - 5042242 - G 77 -5.6 -4.62783 | opp_overlap 5042253, overlap 5042243 GAGGCACTGGAAAAA GCGACGCC GGCG AGCGTCGA GCCAAGCATCATGGC Pmen_4595 5043426 - 5044199 + | IclR family transcriptional regulator TERM 3759 5044317 - 5044289 - f 76 -6 -4.69464 | gap 1 AAAACAGGTGAAAAA CGGTCGC-AGTCG CGCT CGACTTACGAGCG GTAAATGAGCATTTG Pmen_4596 5044792 - 5045910 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pmen_4597 5045922 - 5046521 + | response regulator receiver/ANTAR domain-containing protein TERM 3760 5046571 - 5046602 + F 70 -3.7 -4.63184 | gap 1 TTCGGGCAGTCGGCT GGGCAGACGCAT GCCCGAATA AAGCGTC-GCCC TTTTTCAACTGCCTT Pmen_4598 5046653 - 5048134 + | permease for cytosine/purine, uracil, thiamine, allantoin Pmen_4599 5048145 - 5049866 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 3761 5050663 - 5050642 - T 100 -17.3 -3.54424 | GGCCACTCTCCCAAA GCCACGCCG CTTC CGGCGTGGC CAGCCTTGAATTTGC Pmen_4601 5051228 - 5050932 - | transposase IS3/IS911 family protein TERM 3762 5051351 - 5051334 - R 100 -7.7 -5.72622 | opp_overlap 5051334 CCCAGAAACAAAAAA CCCCTGT AGAT ACAGGAG TTTACGTATTTTGTC Pmen_4602 5053301 - 5051451 - | D-fructose-6-phosphate amidotransferase TERM 3763 5051857 - 5051886 + g 81 -10.7 -4.07687 | GCCACCGGATACTGC GCGCCACGGCC GAGGAACA GGCTGTGGTGC TTTTCGGCGAACAGT Pmen_4603 5054082 - 5053312 - | DeoR family transcriptional regulator TERM 3764 5053918 - 5053888 - G 83 -14.6 -3.67597 | CGGCTCACTGAACAA CTCCTGCGGCACCG GCA CGGCGCCGCCGTAG CGACGCAATAGCAGG Pmen_4604 5054767 - 5054156 - | lysine exporter protein LysE/YggA Pmen_4605 5056182 - 5054824 - | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase TERM 3765 5055244 - 5055208 - G 70 -10.8 -3.54543 | gap 1, opp_overlap 5055230 5055235 ACGCAGGCGGGCAAA CGG-GCCGCAATCGGCG CCCT CGCCCATCTCGGCGCCG TCCAGGTGGCTGTTG TERM 3766 5056286 - 5056255 - R 100 -24.6 -3.86346 | opp_overlap 5056261, overlap 5056261 CTATTTTGCCAGAAA CGCAAAGGGGCGAC CTAA GTCGCCCCTTTGCG TGATACCGCGATACG TERM 3767 5056261 - 5056280 + r 90 -15 -3.68351 | opp_overlap 5056255 5056261 TGCCAGAAACGCAAA GGGGCGAC CTAA GTCGCCCC TTTGCGTGATACCGC TERM 3768 5056280 - 5056261 - R 93 -15 -3.89215 | opp_overlap 5056261, overlap 5056255 TGCCAGAAACGCAAA GGGGCGAC CTAA GTCGCCCC TTTGCGTGATACCGC atpC 5056739 - 5056305 - | F0F1 ATP synthase subunit epsilon Pmen_4607 5058195 - 5056819 - | F0F1 ATP synthase subunit beta Pmen_4608 5059106 - 5058243 - | F0F1 ATP synthase subunit gamma Pmen_4609 5060699 - 5059155 - | F0F1 ATP synthase subunit alpha Pmen_4610 5061251 - 5060715 - | ATP synthase F1, delta subunit Pmen_4611 5061734 - 5061264 - | ATP synthase F0, B subunit TERM 3769 5061601 - 5061616 + g 74 -2.6 -4.78839 | gap 1 GCGCGCCCGGCAGCA TC-CAGA CCT TCTGCGA TTTTCTTCTGGCGTT TERM 3770 5061786 - 5061775 - R 76 -5.8 -4.67982 | overlap 5061776 5061784 GTTCAGGGAAGAAAA GCCT GAAG AGGC AGCAGTGTTCTGCTG TERM 3771 5061803 - 5061784 - R 76 -13.6 -3.09919 | overlap 5061775 5061776 AGAAAAGCCTGAAGA GGCAGCAG TGTT CTGCTGCC TCGAACTCAGGAACT Pmen_4612 5062047 - 5061820 - | F0F1 ATP synthase subunit C Pmen_4613 5062931 - 5062113 - | F0F1 ATP synthase subunit A Pmen_4614 5063345 - 5062956 - | F0F1 ATP synthase subunit I Pmen_4615 5064346 - 5063477 - | chromosome segregation DNA-binding protein TERM 3772 5063781 - 5063805 + g 77 -7.7 -4.43213 | overlap 5063782 CGGGCATGACCCATC TCCAGGTCGCC ATG GGCGAGCAGGG TTTTGATCTCTTCGG Pmen_4616 5065146 - 5064358 - | chromosome segregation ATPase gidB 5065802 - 5065158 - | glucose-inhibited division protein B Pmen_4618 5067694 - 5065802 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 5069668 - 5068301 - | tRNA modification GTPase TrmE TERM 3773 5069288 - 5069308 + g 75 -9.7 -4.05446 | overlap 5069289 CAGGTCGGCGATGGC TTCGGCCTG GGC CAGGTCGAG TTTGTCGTTGAGAAA TERM 3774 5069774 - 5069802 + r 72 -14 -2.54098 | gap 1, opp_overlap 5069764 5069780, overlap 5069780 ACAAATGCTTGGATA GCAAAACGCCCCA ATCA TGGGGCG-TTTGC GTGTTGCTTGGAAGC TERM 3775 5069780 - 5069797 + r 85 -12.7 -3.78902 | opp_overlap 5069780, overlap 5069774 GCTTGGATAGCAAAA CGCCCCA ATCA TGGGGCG TTTGCGTGTTGCTTG TERM 3776 5069797 - 5069780 - R 100 -12.7 -4.34402 | opp_overlap 5069780 5069774 GCTTGGATAGCAAAA CGCCCCA ATCA TGGGGCG TTTGCGTGTTGCTTG Pmen_4620 5071571 - 5069826 - | putative inner membrane protein translocase component YidC TERM 3777 5071075 - 5071087 + g 71 -9.1 -3.7829 | opp_overlap 5071055 ACCACCAGGCTGTCC TGGCC GTC GGCCA TTTCATAGCTCTGCT Pmen_4621 5071819 - 5071574 - | hypothetical protein rnpA 5072216 - 5071812 - | ribonuclease P Pmen_4623 5072364 - 5072230 - | 50S ribosomal protein L34P