TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.373511 %AT, 5157263 nt, 42685 terms. Intergenic: 0.431926 %AT, H2T: 503428 nt, 4752 terms; T2T: 163472 nt, 3553 terms; H2H: 206719 nt, 3744 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148545259|ref|NC_009512.1| Pseudomonas putida F1, complete genome (length 5959964) TERM 1 751 - 713 - g 70 -11.7 -3.22475 | gap 2, opp_overlap 747, overlap 711 CTCAGGCGCACAAGA CGGCCCCGGCAGCAGCGGT TGA ACC-C-GTTGCCGTGGCCG CGGCCGAGCCTGTAT dnaA 385 - 1902 + | chromosomal replication initiation protein Pput_0002 1943 - 3046 + | DNA polymerase III subunit beta recF 3062 - 4165 + | recombination protein F gyrB 4170 - 6590 + | DNA gyrase subunit B TERM 2 6679 - 6694 + F 100 -11.8 -5.81412 | opp_overlap 6679 GTCGGTCACCATCAA GCCCGC CTTC GCGGGC TTTTTTTTGCCTGGA TERM 3 6694 - 6679 - f 74 -11.8 -3.21099 | opp_overlap 6679 GTCGGTCACCATCAA GCCCGC CTTC GCGGGC TTTTTTTTGCCTGGA TERM 4 7224 - 7196 - f 100 -13.9 -4.97402 | overlap 7216 GAAAATGTAGAAAAA CGCGATCAATCCC GAG AGGACTGACCGCG CTTAGCGAAGCAGAC TERM 5 7234 - 7267 + F 71 -4.7 -4.56775 | gap 1, opp_overlap 7216 7234 ACCGCGCTTAGCGAA GCAGAC-TTGCG TCCTCAGAACC CGCAATGTCTGC TTTTTCGAAGCGACT TERM 6 7531 - 7501 - g 100 -5.2 -5.61881 | opp_overlap 7500 GCTCAAAAATAAAAA GCCTGTGCCCTGGG AGT CCCAGCTCGAAGGC GCTCTTTTTCGGCTT Pput_0005 7427 - 8065 + | hypothetical protein TERM 7 8589 - 8578 - g 72 -2.2 -4.71426 | GGGTGATTAATAAAA CCTA CCTG CAGG ATACGATTCCAGCGG TERM 8 9769 - 9743 - g 72 -7.2 -4.13816 | overlap 9746 GCGAGAAAAATATAA TGAGCAGCCTAG CTT CGAGGCTACGCA CAGGTGCTACCAGGA Pput_0006 8046 - 10004 + | integrase catalytic subunit Pput_0007 10001 - 10960 + | AAA ATPase TERM 9 10970 - 10989 + F 74 -12.8 -2.80291 | overlap 10959 10959 ACCTGACGGCCAAGG GCCGGGCT TATC GGCCCGGC TCTACTCCCCTGATT TERM 10 12198 - 12214 + G 70 -7.9 -4.00042 | TTAGGCAGCTGCTAG CTGGTGG TAC CCTCCAG TTCTTTGGTGGAGAA Pput_0008 11036 - 12952 + | hypothetical protein Pput_0009 13009 - 13368 + | hypothetical protein Pput_0010 13740 - 14072 + | hypothetical protein Pput_0011 14625 - 14170 - | hypothetical protein Pput_0012 15394 - 14615 - | hypothetical protein Pput_0013 16519 - 15404 - | copper resistance B precursor TERM 11 16261 - 16278 + g 71 -5.5 -4.371 | AGGCGGGTTTCGCTT TGGGCTG GCCA TGGCCCA TTTTGCTGTGATCAA Pput_0014 16850 - 16509 - | hypothetical protein Pput_0015 18862 - 16847 - | CopA family copper resistance protein TERM 12 17154 - 17132 - G 73 -6.3 -4.36914 | CTCTGCGTCAGAAAA CTTGATCCC ATCGA AGGACCAAG CGAACTTTTCCATAT Pput_0016 19194 - 18988 - | hypothetical protein Pput_0017 19361 - 20038 + | two component heavy metal response transcriptional regulator Pput_0018 20038 - 21444 + | heavy metal sensor signal transduction histidine kinase Pput_0019 21481 - 21828 + | hypothetical protein Pput_0020 21915 - 23168 + | outer membrane efflux protein TERM 13 24050 - 24036 - g 73 -11.4 -3.57263 | opp_overlap 24036 ATGCGGATCTGCAAA GCCGCA CCT TGCGGC TTCGTATAGAACTGC Pput_0021 23165 - 24631 + | RND family efflux transporter MFP subunit Pput_0022 24628 - 27786 + | CzcA family heavy metal efflux protein Pput_0023 27783 - 28130 + | hypothetical protein TERM 14 28143 - 28176 + T 84 -13.3 -3.54935 | overlap 28146 TGACGGATTGACTTC TAACCCTGCCTATTA GAGC TGATAGGCAGGGTCA TTTAGCCAAACTTTG TERM 15 28146 - 28173 + T 82 -15 -2.90615 | overlap 28143 CGGATTGACTTCTAA CCCTGCCTATTA GAGC TGATAGGCAGGG TCATTTAGCCAAACT TERM 16 28462 - 28435 - T 70 -3.4 -4.77165 | gap 1, overlap 28445 TTGTCGACAAGAAAA CCCGCGACAACTC AGA GTGTTATC-CGAG CAAACAGACTTTGGA Pput_0025 29204 - 28545 - | S-isoprenylcysteine methyltransferase-like protein Pput_0026 29476 - 29201 - | hypothetical protein Pput_0027 29957 - 29502 - | hypothetical protein TERM 17 29666 - 29676 + g 81 -6.8 -4.72272 | CCATGGACTTCATCA TGGC CAT GCCA TTTTTCATCAGCGCC Pput_0028 31118 - 30096 - | YVTN beta-propeller repeat-containing protein TERM 18 30845 - 30855 + g 73 -8.2 -4.09685 | opp_overlap 30844 TGAACACCAGCAACT GCCC ACC GGGC TTTTCACCGCTCGAA TERM 19 31355 - 31333 - R 100 -15.6 -4.29106 | overlap 31346 31348 CTGTATATGAAGAAA CCGCGCCATG AAA CATGGCACGG CGGCTTGCCATCTGA Pput_0029 31584 - 31384 - | heavy metal transport/detoxification protein Pput_0030 34297 - 31922 - | copper-translocating P-type ATPase TERM 20 34476 - 34459 - R 76 -6.9 -4.55689 | overlap 34461 ACGAGCCACATAAAA CAGGCCA AATA TGGCCAG CATGATCAGTGCAAT TERM 21 34474 - 34461 - R 71 -8.1 -3.88698 | overlap 34459 GAGCCACATAAAACA GGCCA AATA TGGCC AGCATGATCAGTGCA Pput_0031 34640 - 34482 - | hypothetical protein TERM 22 35246 - 35261 + H 74 -4.6 -4.72497 | overlap 35233 ATGGCTGACCCGTGG CAGGGC GTTG GCCGTG TTTTCTTCGTGCGTG Pput_0033 35432 - 36466 + | hypothetical protein Pput_0034 37015 - 36650 - | hypothetical protein TERM 23 36916 - 36935 + g 100 -13.6 -4.45544 | opp_overlap 36916 CCGCATTGAATTTAA GGCCCTCA ATAT TGAGGGCC TTTTCATTGGTGCCA TERM 24 36935 - 36916 - G 76 -13.6 -3.19192 | opp_overlap 36916 CCGCATTGAATTTAA GGCCCTCA ATAT TGAGGGCC TTTTCATTGGTGCCA TERM 25 37283 - 37309 + H 73 -5 -4.56597 | opp_overlap 37278 GCGGGTAATACCACC CCTGAGCCCTAC GAG GTGGTGTTCCGG TTTTTGACCAAACGA Pput_0035 37298 - 37546 + | hypothetical protein TERM 26 37935 - 37910 - g 72 -11.9 -3.39482 | overlap 37914 CAAGATCATCGACAA GGAAGGTTTCG AGGC CGAGACCTTCC GCAGAGATCCGTGGT Pput_0036 37857 - 38780 + | hypothetical protein TERM 27 38797 - 38844 + F 100 -24 -3.55761 | gap 1, opp_overlap 38797, overlap 38807 GAGGCCTGCTGTAAA CCACTTTTTTTCACTGTAAACCA CAG TGGTTTACAGTGAAAAAA-GTGG TTTACAACGTAGCTA TERM 28 38844 - 38797 - f 100 -24 -3.53224 | gap 1, opp_overlap 38797 38807 GAGGCCTGCTGTAAA CCACTTTTTTTCACTGTAAACCA CAG TGGTTTACAGTGAAAAAA-GTGG TTTACAACGTAGCTA Pput_0037 38986 - 39210 + | hypothetical protein Pput_0038 39225 - 39431 + | hypothetical protein TERM 29 39550 - 39567 + T 100 -11.3 -5.5112 | opp_overlap 39550 AGCCCCAAAAAAAAA GCAGCTC CCGA GAGCTGC TTTTTTCTTACTCCC TERM 30 39567 - 39550 - T 100 -11.3 -6.07627 | opp_overlap 39550 AGCCCCAAAAAAAAA GCAGCTC CCGA GAGCTGC TTTTTTCTTACTCCC Pput_0039 41523 - 39826 - | hypothetical protein TERM 31 40267 - 40284 + g 71 -5.5 -4.2528 | overlap 40268 GTCGAGCTCGTTGGT CTCGCAC ACCG GTGCGAA TTTCTTGAATTGCGA TERM 32 41706 - 41693 - H 72 -2.4 -4.89852 | opp_overlap 41705 GCATAGGGATAAAAA GAGA AATGAA TCTC GCTGAGCGCATTATT TERM 33 41901 - 41884 - H 71 -8.5 -3.9279 | ATTTAATTTCACAAA CAAAACG GTTT CGTTTTG TCGTAGGCTAATTTT Pput_0040 42407 - 43312 + | cation diffusion facilitator family transporter TERM 34 43365 - 43336 - f 77 -10.8 -3.72678 | opp_overlap 43340, overlap 43338 TAAACACCATGCAAA CACATCACCCTC CTGGCT GAGGGTGATGTT GCAAAAAAAATGCGG TERM 35 43363 - 43338 - f 82 -13.4 -3.43511 | opp_overlap 43340, overlap 43336 AACACCATGCAAACA CATCACCCTC CTGGCT GAGGGTGATG TTGCAAAAAAAATGC Pput_0041 43470 - 43820 + | hypothetical protein Pput_0042 44179 - 43853 - | hypothetical protein TERM 36 44218 - 44201 - H 100 -9.8 -5.4505 | TCCCTTAATAAAAAA GCGCCC GTAGGG GGGCGC TAAAATTCACCTACC TERM 37 44922 - 44903 - g 86 -8.6 -4.61284 | AAGACGAAATTAAAA CTGCCGAA TATC TTCAGCAG GGCCTATCCGAAAGC Pput_0043 44869 - 45543 + | two component heavy metal response transcriptional regulator TERM 38 45725 - 45683 - g 76 -9.8 -3.91352 | AGACCTGGAAGTAAA GATGGCGGGGATGGCTCACA ACC TGTCCACCATCCCGGACATC TCCGGCGTCAACGCG Pput_0044 45540 - 46958 + | heavy metal sensor signal transduction histidine kinase TERM 39 46977 - 46996 + T 100 -15 -4.90778 | opp_overlap 46974 46971 GCGCAGACACGATTA GGCCCGTC AATC GACGGGCC TTTTGTTTGCCTCAA Pput_0045 47603 - 47016 - | hypothetical protein TERM 40 47081 - 47094 + g 72 -4.5 -4.57837 | TAATAATCTTCTGTT CGTCA GGAT TGGCG TTTTTCCACAGGTGT Pput_0046 47870 - 48091 + | hypothetical protein TERM 41 48166 - 48128 - T 87 -9.8 -4.54253 | gap 1, opp_overlap 48132 48139, overlap 48129 48132 48139 AAATGACGAAAGAAA TCGACAAAAAAGCCAGG GTAAAA CCTGGCTTTTTTGT-GC TTGGAATTTAGCCTT TERM 42 48165 - 48129 - T 81 -13.3 -3.30925 | gap 1, opp_overlap 48132 48139, overlap 48128 48132 48139 AATGACGAAAGAAAT CGACAAAAAAGCCAGG GTAAAA CCTGGCTTTTTTGT-G CTTGGAATTTAGCCT TERM 43 48132 - 48163 + T 82 -16.1 -2.7728 | opp_overlap 48129 48128 48132 48139, overlap 48139 GACGAAAGAAATCGA CAAAAAAGCCAGG GTAAAA CCTGGCTTTTTTG TGCTTGGAATTTAGC TERM 44 48163 - 48132 - T 82 -16.1 -2.8166 | opp_overlap 48132 48139, overlap 48129 48128 48139 GACGAAAGAAATCGA CAAAAAAGCCAGG GTAAAA CCTGGCTTTTTTG TGCTTGGAATTTAGC TERM 45 48156 - 48139 - T 95 -8.4 -5.33866 | opp_overlap 48139 48132, overlap 48132 48129 48128 GAAATCGACAAAAAA GCCAGG GTAAAA CCTGGC TTTTTTGTGCTTGGA TERM 46 48139 - 48156 + T 95 -8.4 -5.37345 | opp_overlap 48132 48129 48128 48139, overlap 48132 GAAATCGACAAAAAA GCCAGG GTAAAA CCTGGC TTTTTTGTGCTTGGA Pput_0047 49628 - 48174 - | glycosyl transferase family protein Pput_0048 50605 - 49622 - | ribonuclease III Pput_0049 50990 - 50571 - | GtrA family protein Pput_0050 51248 - 52216 + | LysR family transcriptional regulator Pput_0051 52427 - 53734 + | phosphate-selective porin O and P TERM 47 53757 - 53793 + G 93 -17.4 -3.52906 | opp_overlap 53762, overlap 53758 53762 CATCAGTCTGACGTG AGAAAGCCGGAAGCGC TCAAC GTGCTTCCGGCTTTCC TGTTTCTGGAGGTGA TERM 48 53758 - 53792 + G 91 -20.9 -2.71422 | opp_overlap 53762, overlap 53757 53762 ATCAGTCTGACGTGA GAAAGCCGGAAGCGC TCAAC GTGCTTCCGGCTTTC CTGTTTCTGGAGGTG TERM 49 53788 - 53762 - g 86 -13.7 -3.89346 | opp_overlap 53758 53757 53762 GTCTGACGTGAGAAA GCCGGAAGCGC TCAAC GTGCTTCCGGC TTTCCTGTTTCTGGA TERM 50 53762 - 53788 + G 95 -15.9 -4.04579 | opp_overlap 53762, overlap 53758 53757 GTCTGACGTGAGAAA GCCGGAAGCGC TCAAC GTGCTTCCGGC TTTCCTGTTTCTGGA Pput_0052 53754 - 53888 + | hypothetical protein TERM 51 54057 - 54047 - g 78 -3.2 -5.0133 | CATGTCTGCAAAAAA GCTG CTT CAAC CTCTCGCTGCTCAGC Pput_0053 54033 - 55058 + | hypothetical protein TERM 52 55218 - 55207 - g 82 -5.8 -4.95618 | overlap 55212 AAGAGTAAAAACAAA CAGG ACAC CCTG GCGGCGATCAATGCG Pput_0054 55186 - 55410 + | hypothetical protein TERM 53 55418 - 55452 + T 100 -25.9 -3.51825 | opp_overlap 55418 ACGAGTGAGAGAAAA GTACGGGTCGTGCGC TGATC GCGCACGACCCGTAC TTCTACTTCAGGTCA TERM 54 55452 - 55418 - T 100 -25.9 -4.55689 | opp_overlap 55418 ACGAGTGAGAGAAAA GTACGGGTCGTGCGC TGATC GCGCACGACCCGTAC TTCTACTTCAGGTCA Pput_0055 57500 - 55503 - | heavy metal translocating P-type ATPase TERM 55 55845 - 55863 + g 73 -3.1 -4.74801 | gap 1, overlap 55848 ACCCACCATGGCCAC CTTGGCGC TAAG GCGC-AGG TTTTTGATGGCCTTG TERM 56 57665 - 57647 - R 100 -14.6 -5.4505 | opp_overlap 57647 GGGCGTAATAAAAAA TGCCAGGC ACT GCCTGGCA TTTATGAATTCTCTA TERM 57 57647 - 57665 + r 95 -14.6 -4.01137 | opp_overlap 57647 GGGCGTAATAAAAAA TGCCAGGC ACT GCCTGGCA TTTATGAATTCTCTA Pput_0056 58026 - 57703 - | hypothetical protein TERM 58 57877 - 57892 + g 80 -4.7 -4.84359 | GTAATCCTGAATCTC TGGCA TTGGCT TGCCA TTTTTCTCCGCGTAC TERM 59 58148 - 58169 + r 91 -14.5 -3.81488 | opp_overlap 58148 ACTTTAAACAAAAAA GCCCACAAC ACGT GTTGTGGGC TTCTCTTTAGCGGAG TERM 60 58169 - 58148 - R 100 -14.5 -5.64421 | opp_overlap 58148 ACTTTAAACAAAAAA GCCCACAAC ACGT GTTGTGGGC TTCTCTTTAGCGGAG Pput_0057 61350 - 58189 - | CzcA family heavy metal efflux protein TERM 61 61380 - 61414 + r 75 -12.8 -3.12668 | TCAGTTCGCATCAGT GACCGTGTTCGGCAGA AGC TTTGCCGAGCTCGGAC TTGAGTGTGAAGCTG Pput_0058 62625 - 61375 - | RND family efflux transporter MFP subunit TERM 62 62465 - 62478 + g 75 -3.7 -4.72007 | TCACCTTCCTCTTTG GCGGC AGAT GCGGC TTTCTTTTCGTCGCC TERM 63 62596 - 62613 + g 71 -5.5 -4.35604 | overlap 62581 TGCCACAGCGGCTAC CGCGAGG GCGA TCTTGCG TTTGTTATCCATTGC Pput_0059 63878 - 62694 - | outer membrane efflux protein TERM 64 63334 - 63356 + g 74 -2.7 -4.84529 | gap 1 CTCCCGGTAATTTGA GCGAGCTGTT GGTA AGCGG-TCGC TTTTTCCGTTTCTGC Pput_0060 64369 - 65712 + | outer membrane porin TERM 65 65723 - 65747 + F 75 -13 -3.13403 | overlap 65718 65722 TGTAATTCGCTAACT GGACCAGTTA TTCAT TAACTGGTCC TATTAGTAAAACGAG TERM 66 65819 - 65835 + F 100 -15.1 -5.47218 | AAAAGGTGGATATTT GGCGCCC ATT GGGCGCC TTTTTTTGCCTAAAA Pput_0061 66201 - 66875 + | two component heavy metal response transcriptional regulator Pput_0062 66993 - 67316 + | hypothetical protein Pput_0063 68029 - 67418 - | hypothetical protein TERM 67 67732 - 67716 - G 71 -5.1 -4.40572 | AGAACTGGCAGAAAA GCCTTGA TCA TGAAGGC GAATAACATCGACGA Pput_0064 69601 - 68135 - | hypothetical protein Pput_0065 70063 - 69614 - | hypothetical protein TERM 68 70740 - 70711 - R 95 -19.5 -2.88579 | opp_overlap 70711 70718, overlap 70718 GTAATTCGCCAGACA CTAAAAAGCCCGC TGAT GCGGGCTTTTTAG TGTCTGCAAAAAATC TERM 69 70711 - 70740 + r 95 -19.5 -2.87344 | opp_overlap 70711 70718, overlap 70718 GTAATTCGCCAGACA CTAAAAAGCCCGC TGAT GCGGGCTTTTTAG TGTCTGCAAAAAATC TERM 70 70733 - 70718 - R 100 -11.8 -4.84527 | opp_overlap 70711 70718, overlap 70711 GCCAGACACTAAAAA GCCCGC TGAT GCGGGC TTTTTAGTGTCTGCA TERM 71 70718 - 70733 + r 100 -11.8 -4.84527 | opp_overlap 70718 70711, overlap 70711 GCCAGACACTAAAAA GCCCGC TGAT GCGGGC TTTTTAGTGTCTGCA Pput_0066 71161 - 70754 - | hypothetical protein Pput_0067 72585 - 71293 - | sigma-54 dependent trancsriptional regulator Pput_0068 72808 - 73692 + | beta-lactamase domain-containing protein Pput_0069 73733 - 75001 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 72 75700 - 75753 + G 71 -13.7 -2.62613 | gap 1, overlap 75688 75699 75742 GGCGCGGTGCTTGGC CTGCTGCTGTCGCGACCCTTGGCAGC CAG GTTGGCC-GGGCCGCGTCTGCAGCAG ATGTTTGCCGTGGCA Pput_0070 74998 - 75816 + | hypothetical protein Pput_0071 76692 - 75805 - | LysR family transcriptional regulator TERM 73 75876 - 75844 - G 77 -13.4 -3.28712 | overlap 75820 75867 TTCGGCCGCGCACAA CGCCAGCAGGTAGT CCCAC ACCACCCGCAGGCG CACAGACTTGTGCAG Pput_0072 76927 - 78573 + | glucose-methanol-choline oxidoreductase TERM 74 78748 - 78781 + G 100 -4 -5.43414 | gap 2, overlap 78755 CAAGATCATTTTCGC GTCAT-CC-CTCGGGA CGGT TTTCGAGTGGTATGAC TTTTTTCTCTATGGT Pput_0073 78671 - 80290 + | general substrate transporter TERM 75 80328 - 80312 - T 100 -9.4 -5.626 | opp_overlap 80307 80312 CATGCCATAAAAAAA CCGGCT GTAAA AGCCGG TTTTCTTATGCCTCA TERM 76 80312 - 80328 + T 86 -9.4 -4.79352 | opp_overlap 80312, overlap 80307 CATGCCATAAAAAAA CCGGCT GTAAA AGCCGG TTTTCTTATGCCTCA Pput_0074 81250 - 80465 - | phospholipid/glycerol acyltransferase TERM 77 81292 - 81277 - R 95 -10.4 -4.82901 | opp_overlap 81277 81276 81274 CCCGCCTGAGAAAAA TGCGCC AGAA GGCGCA CTGTTTAAATTAGTT Pput_0075 81824 - 81297 - | D,D-heptose 1,7-bisphosphate phosphatase TERM 78 81663 - 81702 + g 83 -15.6 -3.16564 | overlap 81638 GTAGCCACGGGCAAT GCCGGACTGGTTGGTGGC CACG GCCACCGTCCAGCCCGCC TTGCTCAACTGCGCG glyS 83882 - 81828 - | glycyl-tRNA synthetase subunit beta TERM 79 82914 - 82935 + g 74 -5.7 -4.45664 | GAAGAACTCGGCGTC GGTCAGGCG CGGG CGCACGACC TTTTCGTTGCCTTGC TERM 80 83765 - 83783 + g 83 -8 -4.65895 | overlap 83744 TGCCGGTGTAGTTCA GGCCAGCG GCC TGCAGGCC TTTTTCGATACCGGC glyQ 84826 - 83879 - | glycyl-tRNA synthetase subunit alpha Pput_0078 84910 - 85461 + | DNA-3-methyladenine glycosylase I Pput_0079 85503 - 86390 + | lipid A biosynthesis lauroyl acyltransferase TERM 81 86470 - 86415 - T 100 -29.2 -3.14132 | opp_overlap 86399, overlap 86467 CGTCCTCTGTAGGAA CGGGTTTACCCGCGAATGCGATGTTG GATT CACCGACGCATTCGCGGGTAAACCCG CTCCTACAGGGACCG Pput_0080 86802 - 86488 - | TPR repeat-containing protein trkA 88187 - 86814 - | potassium transporter peripheral membrane component Pput_0082 89521 - 88211 - | sun protein fmt 90450 - 89518 - | methionyl-tRNA formyltransferase TERM 82 90494 - 90477 - R 100 -11.3 -5.75538 | TTCAAAAAAGAAAAA GGCTTGC CGGA GCAAGCC TTCAGGAAGGTGGGG def 91017 - 90511 - | peptide deformylase Pput_0085 91224 - 92321 + | DNA protecting protein DprA Pput_0086 92364 - 92921 + | SUA5/yciO/yrdC domain-containing protein TERM 83 93127 - 93154 + F 75 -2.5 -5.08824 | overlap 93109 93128 GTCGCCGAATAACTT GGCGATCGGGT GTGGTA GCCCGGACGCA TTTTTTCCATGACAG Pput_0087 93301 - 93618 + | hypothetical protein Pput_0088 94722 - 93745 - | alcohol dehydrogenase Pput_0089 94857 - 95768 + | coproporphyrinogen III oxidase aroE 95794 - 96618 + | shikimate 5-dehydrogenase TERM 84 96705 - 96657 - T 90 -18.2 -3.06183 | gap 1, opp_overlap 96657, overlap 96672 CCTATCGCGACGCAA GGCCGCTCCCACA-AAGGGCGTC GCAC GCCGATCTTCTGTGGGAGCGGCC TTGTGTCGCGATGGG TERM 85 96657 - 96705 + T 100 -20.4 -3.49475 | gap 1, opp_overlap 96657 96672 CCTATCGCGACGCAA GGCCGCTCCCACA-AAGGGCGTC GCAC GCCGATCTTCTGTGGGAGCGGCC TTGTGTCGCGATGGG Pput_0091 98313 - 96748 - | sulphate transporter TERM 86 97659 - 97642 - G 76 -10.5 -3.93256 | overlap 97653 CACATGGCCAAAGAA GCCCGGC AACA GCCAGGC CAGCAAGCTGACCAG TERM 87 98393 - 98376 - R 75 -6.3 -4.57073 | gap 1 CATGCCCGCGAAAAA GCCAACGC GTT GC-TTGGC ACCGGCTTCGCCGGT Pput_0092 99381 - 98458 - | substrate-binding region of ABC-type glycine betaine transport system Pput_0093 100913 - 99396 - | sulfatase Pput_0094 101022 - 101921 + | LysR family transcriptional regulator TERM 88 102006 - 101958 - T 82 -13.8 -3.49475 | gap 1, opp_overlap 101958 CCCATCGCGACACAA GGCCGCTCCCAAAAAGACACTGC GCAC GCCG-GCCCATGTGGGAGCGGCC TTGCGTCGCGATGGG Pput_0095 102660 - 102043 - | hypothetical protein Pput_0096 102713 - 103045 + | DOPA 4,5-dioxygenase trpA 103975 - 103166 - | tryptophan synthase subunit alpha Pput_0098 105189 - 103972 - | tryptophan synthase subunit beta TERM 89 104487 - 104505 + g 73 -11 -3.54382 | opp_overlap 104484 104487, overlap 104499 CGACGCAGGCAACCA GGCTGTCT GGC AGACGGCC TTCCTTCTCTTGCAA TERM 90 104831 - 104854 + g 72 -4.4 -4.59773 | overlap 104792 104827 104826 ACACCGTGCATGCCG GCGCCGGTTT CGGC GATCAGGCGC TTTTTGCCCATGCGC Pput_0099 105300 - 106196 + | LysR family transcriptional regulator Pput_0100 106516 - 106193 - | protein of unknown function DUF883, ElaB TERM 91 106728 - 106695 - g 72 -2.5 -4.79955 | ACACCTACAAGAAAA TCGA-GCTGGTCGGG TCTTCG CCC-ACCAGTATCGA AGAGGCGATTAACAA Pput_0101 106667 - 106882 + | hypothetical protein TERM 92 106930 - 106950 + F 72 -9.6 -3.6392 | opp_overlap 106929 106930, overlap 106922 GAGGTATTCAGAAAT GGGGCGCC TTGGT GGGGCCCC TTCTGATTTCATCTG Pput_0102 106983 - 107204 + | hypothetical protein Pput_0103 108281 - 107277 - | luciferase family protein TERM 93 108302 - 108314 + H 76 -6.9 -4.5464 | overlap 108303 CTCCGCAAGAGTGAT TGGCC AGA GGCCG TTTTGATTCTGTATG Pput_0104 108434 - 108859 + | OsmC family protein Pput_0105 108935 - 109168 + | hypothetical protein Pput_0106 109617 - 109204 - | hypothetical protein TERM 94 109666 - 109714 + r 74 -4.5 -4.78107 | gap 2, overlap 109667 AGCATAGCGCCGTTT GTGC-GGTTCAGGTGC-GCTGGC AACCC GCCGGCAGCCCTTGACCCAGCAG TTTTTGCTGGTGGTC Pput_0107 110086 - 109673 - | hypothetical protein Pput_0108 110154 - 111245 + | hypothetical protein Pput_0109 112064 - 111351 - | HAD family hydrolase TERM 95 112022 - 112069 + g 76 -13.4 -3.22223 | overlap 112023 GGGTTCCACTTGAGT GCTGAGTGGCCTTCTTCGCGGG CATG CCCGCGAATGCGGTCATTCAGG TTGATCGTAGCCTTC TERM 96 112023 - 112068 + g 83 -16.9 -2.53012 | overlap 112022 GGTTCCACTTGAGTG CTGAGTGGCCTTCTTCGCGGG CATG CCCGCGAATGCGGTCATTCAG GTTGATCGTAGCCTT Pput_0110 112609 - 112061 - | carbonic anhydrase Pput_0111 112676 - 114763 + | oligopeptidase A Pput_0112 114760 - 115041 + | nucleic acid binding protein TERM 97 115088 - 115042 - f 83 -15.3 -3.14463 | gap 2, opp_overlap 115043 AAGCCGGCTGAGTAA TCCTGT-CATGCC-GCCCGGG TGCAATG CCCGGGCAGGCATGGACAGGT GTTAGATAGTCAGGC TERM 98 115043 - 115087 + F 100 -20.2 -3.10796 | gap 2, opp_overlap 115042 AGCCGGCTGAGTAAT CCTGT-CATGCC-GCCCGGGTG CAA TGCCCGGGCAGGCATGGACAGG TGTTAGATAGTCAGG Pput_0113 115166 - 117160 + | peptidase M3A and M3B, thimet/oligopeptidase F TERM 99 117270 - 117254 - g 72 -7.9 -4.15565 | TCCAGCACCGCAAAA GGGCCGT GGC ACGGCGC ACAATCCACACAACC Pput_0114 117231 - 118289 + | radical SAM domain-containing protein Pput_0115 118593 - 119312 + | carbonate dehydratase TERM 100 119413 - 119439 + F 70 -10.7 -3.28712 | CTGCTCTGCCGGCGT GCTCGCTGGCG GCCCG CGCCTGCGCGC TTGTCAGGGGCAAAC TERM 101 119538 - 119526 - g 70 -10.5 -3.65693 | opp_overlap 119525 119528 119532 ATTACACAGTTGAAA GCGGC CCT GCCGC GTGAGTTGCTGGCGT TERM 102 120067 - 120085 + G 74 -10.2 -3.73224 | overlap 120068 GGGGCTGGGAGCGCT TGCGGCCG CAG CGGCTGCG TTTCGTGCCGGGTGC Pput_0116 119505 - 121037 + | sulphate transporter Pput_0117 121185 - 121015 - | hypothetical protein TERM 103 121091 - 121113 + g 70 -10.5 -3.55444 | GTGATCGGCGGGTGG GGGTTGGCC AGCAG GGCCGGCCC TTTCGCGGGTGAACC Pput_0118 121938 - 121297 - | hypothetical protein TERM 104 121593 - 121543 - G 80 -14.8 -3.15544 | opp_overlap 121557 GTCGACCGGGATCAA CGGCTGCTGGAAGTGGCGAATG TACAAGT CATTCACCTCTTCCACCAGGCG GTGCGCCAGGTACGC TERM 105 123395 - 123379 - g 81 -7.9 -4.44667 | TGGGGCAACAACAAA GGCGACA TGG TGACGCC GAAGGACGTGCTGGC Pput_0119 122308 - 123435 + | cytochrome c oxidase, subunit II Pput_0120 123479 - 125068 + | cytochrome c oxidase, subunit I Pput_0121 125078 - 125644 + | cytochrome C oxidase assembly protein Pput_0122 125661 - 126548 + | cytochrome c oxidase, subunit III Pput_0123 126779 - 126576 - | hypothetical protein TERM 106 127539 - 127523 - gH 74 -2.1 -4.82901 | overlap 127526 CGGCTGGCACAAAAA CAAGGAG AAA CGCCATG GCCACCGCCACTCCA Pput_0124 126807 - 127568 + | hypothetical protein Pput_0125 127537 - 128118 + | hypothetical protein Pput_0126 128128 - 129207 + | cytochrome oxidase assembly TERM 107 129457 - 129438 - g 74 -9.3 -3.92869 | GCACGCACCCACAAA CGGCCTT TGGCCC AAGGCCG AGTCGAGCCCCTGCC Pput_0127 129192 - 130085 + | protoheme IX farnesyltransferase Pput_0128 130082 - 130714 + | electron transport protein SCO1/SenC TERM 108 130800 - 130753 - T 70 -9.6 -3.48276 | opp_overlap 130753 CCTTTCGCGACACAA GGCCGCTCTCACATGGATCGGC GTAC GCCTTACTTTGTGGGAGCGGCC TTGCGTCGCGAAAGG TERM 109 130753 - 130800 + T 81 -14 -3.05384 | opp_overlap 130753 CCTTTCGCGACACAA GGCCGCTCTCACATGGATCGGC GTAC GCCTTACTTTGTGGGAGCGGCC TTGCGTCGCGAAAGG TERM 110 130830 - 130814 - T 88 -15.1 -3.53012 | CCTTGCGTCGCGAAA GGGCCGC AAA GCGGCCC CGGGGATGTTGGCTC Pput_0129 131614 - 130844 - | NLPA lipoprotein TERM 111 130900 - 130924 + g 71 -5.5 -4.30177 | opp_overlap 130889 TGAACTGCTTCACCT CAGGCGAGTGC AGT GCAGCCGCCAG TTTCTTCATGTCGTC TERM 112 130986 - 131014 + g 72 -4.4 -4.62471 | opp_overlap 130983, overlap 130989 ATGTTCACGTAAGGC GAGTCGCTGCCC TCGAT GGCCAGCGCGTC TTTTTCCGGGTTCAG TERM 113 131644 - 131678 + r 91 -17.8 -3.33696 | GAGGGCCGCGACGGC CCCCGAACGGGTCGGC CAG GCCGACCCCATTGGGG TTACTTACGGGAAAA Pput_0130 132350 - 131679 - | binding-protein-dependent transport systems inner membrane component Pput_0131 133357 - 132350 - | ABC transporter related TERM 114 133179 - 133202 + g 80 -14.6 -3.14132 | gap 1 TCGACGATGATCGTG CCGCC-GGAGG GCT CCTCCAGGCGG TTGATCAGGCGCAGC TERM 115 133310 - 133329 + g 91 -9.3 -4.56961 | CAGTGCGGGGATTTC CCTACCG GCAACG CGGTAGG TTTTATGTACCTGTT TERM 116 134917 - 134894 - g 71 -8.8 -3.90112 | gap 1, overlap 134842 GCTGGCCGAAGGAAA CCCCG-CCTGC GGC GCAGGACGGCG GCTTCGAGAGCTATC katE 133585 - 135720 + | hydroperoxidase II TERM 117 135781 - 135725 - T 85 -16.6 -2.57132 | opp_overlap 135715 135714 135727, overlap 135742 TTCCTGCCTGATAAG GCCTTTTTGCGGGTAAACCCGCTCCT GATGT AGGAGCGGGTTTACCCGCGAAGCGTT TACTGCTGATGCGGG TERM 118 135727 - 135779 + T 100 -28.7 -3.80573 | opp_overlap 135725 135742 CCTGCCTGATAAGGC CTTTTTGCGGGTAAACCCGCTCCTG ATG TAGGAGCGGGTTTACCCGCGAAGCG TTTACTGCTGATGCG TERM 119 135764 - 135742 - T 88 -14.9 -3.53012 | opp_overlap 135727, overlap 135725 CTTTTTGCGGGTAAA CCCGCTCCT GATGT AGGAGCGGG TTTACCCGCGAAGCG Pput_0133 136488 - 135781 - | hypothetical protein TERM 120 136586 - 136611 + r 100 -14.8 -4.19276 | overlap 136609 TACGGGCCGAAGGTT GCAAGGCGTG CCTGCA CACGCCTTGC TTTTCAGCGTTTTGG Pput_0134 137397 - 136615 - | ABC-3 protein Pput_0135 138163 - 137390 - | ABC transporter related Pput_0136 138645 - 138160 - | ferric uptake regulator family protein TERM 121 138903 - 138925 + G 76 -11.2 -3.76224 | CCCCTCGGACGTGCG GCGGGTAGGC GAT GCCGACCTGC TTTACTGGATCGGCC TERM 122 139192 - 139160 - g 72 -4.2 -4.58283 | gap 2, overlap 139162 TAATCGCGGCAAAAA TGG-CAGCT-GACCTG GCC CAGGTCGACCCGGCCA ATGCGGCTCGCTATC Pput_0137 138712 - 139620 + | periplasmic solute binding protein Pput_0138 140682 - 139732 - | homoserine kinase TERM 123 140707 - 140692 - R 74 -4.6 -4.79223 | opp_overlap 140700 140701, overlap 140693 TGACATGATGAAAAA TTGCCC ATAC GGGCAC TTCCGCCGGGAAGTG TERM 124 140701 - 140726 + r 75 -13.3 -2.5547 | opp_overlap 140693 140692, overlap 140700 GAAAAATTGCCCATA CGGGCACTTCC GCCG GGAAGTGCCGG GTTGATGTGAACGGT Pput_0139 141039 - 140752 - | hypothetical protein TERM 125 141720 - 141704 - g 78 -3.6 -5.00616 | overlap 141706 GCGTGGGCGAAAAAA CGGCAG TGGGG CTGCTG ACCGGCATCGGCGGC TERM 126 143629 - 143571 - g 74 -10 -3.68936 | CATCAATGCCAAGAA CCCTGCCCTGCGCAAGGGCGCCGAGCGC ACG GCGATCAACGCCCCGATGCAGGGTACTG CTGCCGACATCATCA Pput_0140 141115 - 143862 + | DNA polymerase I TERM 127 144115 - 144133 + T 100 -4.4 -5.75342 | opp_overlap 144127, overlap 144127 CCCGAACTTCCCCCT CCCCATAC GAA GTCCGGGG TTTTTTTTGCCCGGA Pput_0141 144897 - 144265 - | GTPase EngB TERM 128 144826 - 144852 + g 74 -9.4 -3.89215 | GTCGTCCGGGCATTG TTCGACCTTGGC TGC GCTGAGGGCGAA TTTGGCTTTCTGGCA Pput_0142 145099 - 145401 + | cytochrome c5-like protein Pput_0143 145433 - 146050 + | cytochrome c, class I TERM 129 146083 - 146099 + F 100 -11.5 -5.24129 | opp_overlap 146083 AGGTCAATGATGAAA GGGCGGC CGG GCTGCCC TTTTTTCTGCCCGCA TERM 130 146099 - 146083 - f 71 -9.3 -3.84514 | opp_overlap 146083 AGGTCAATGATGAAA GGGCGGC CGG GCTGCCC TTTTTTCTGCCCGCA Pput_0144 146202 - 146834 + | DSBA oxidoreductase Pput_0145 146847 - 147701 + | endonuclease/exonuclease/phosphatase TERM 131 147933 - 147947 + G 74 -12.8 -3.34192 | opp_overlap 147929 AGCGACAACATGGAC GCCGGC CTC GCCGGC TTGATTCCGCGCCTT TERM 132 148030 - 148014 - g 74 -12.3 -3.40073 | ACCCGCATGAACCAA GTCAGCG ATG CGCTGAC CGCACTGGTTGGCCA TERM 133 148201 - 148235 + G 73 -11.4 -3.61398 | opp_overlap 148213, overlap 148200 148213 CGGCCCTTGGCAAGC CGGGTGAAGAAACCCG ACC CGGGTTTCTGCAGCGG TTGTTCGGAAGCCGC TERM 134 148213 - 148223 + G 71 -8.2 -3.86822 | opp_overlap 148213, overlap 148200 148201 AGCCGGGTGAAGAAA CCCG ACC CGGG TTTCTGCAGCGGTTG TERM 135 148223 - 148213 - g 76 -8.2 -4.15222 | opp_overlap 148200 148213 148201 AGCCGGGTGAAGAAA CCCG ACC CGGG TTTCTGCAGCGGTTG Pput_0146 147729 - 149666 + | diguanylate cyclase TERM 136 150008 - 149988 - g 73 -6.7 -4.25104 | GCTGGTGGATGAAAA CCGTCGTGC CTG GCATGCCGG TGATAGCCAGTGGCA Pput_0147 149740 - 150528 + | N-acetylmuramoyl-L-alanine amidase Pput_0148 150719 - 152326 + | EAL domain-containing protein Pput_0149 154122 - 152341 - | multi-sensor signal transduction histidine kinase TERM 137 153374 - 153353 - G 70 -10.1 -3.5393 | opp_overlap 153362, overlap 153354 AGTACGGCCTGTAAA CGCTGCTGG CCGG CCAGCAGCT CGTCAACGTTGGTGG TERM 138 153373 - 153354 - G 72 -13.6 -2.72144 | opp_overlap 153362, overlap 153353 GTACGGCCTGTAAAC GCTGCTGG CCGG CCAGCAGC TCGTCAACGTTGGTG TERM 139 154102 - 154089 - G 71 -5.9 -4.26344 | opp_overlap 154089 AGATGCTGAGGAAAA GCCGC GTCC GCAGC TTCATGGGCGGCCAT Pput_0150 155465 - 154119 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 140 155628 - 155641 + H 70 -3.1 -4.7416 | AGACACGCGCTGGCA CATTG GTTG CGATG TTTTTCAGATTTTGC Pput_0151 155676 - 156497 + | transport-associated Pput_0152 156670 - 156960 + | hypothetical protein TERM 141 156938 - 156952 + F 74 -7.1 -4.36914 | opp_overlap 156933, overlap 156932 TGGAAAAAGTTGTTC CCCAG GAACG CTGGG TTTTCTGACCAGGCG Pput_0153 157004 - 157165 + | hypothetical protein Pput_0154 157168 - 157638 + | inhibitor of vertebrate lysozyme gltP 158382 - 159710 + | glutamate/aspartate:proton symporter TERM 142 159728 - 159757 + F 79 -12.9 -3.49102 | opp_overlap 159732 159734, overlap 159734 CTGATGGCTGTTTGA CCAAGAGCCCCGA CTTG TCGGGGCTTTTTG TTATCTGCGAGATCT TERM 143 159751 - 159734 - f 75 -12.7 -3.13403 | opp_overlap 159728 159734, overlap 159732 GCTGTTTGACCAAGA GCCCCGA CTTG TCGGGGC TTTTTGTTATCTGCG TERM 144 159734 - 159751 + F 100 -12.7 -5.24796 | opp_overlap 159734 159732, overlap 159728 GCTGTTTGACCAAGA GCCCCGA CTTG TCGGGGC TTTTTGTTATCTGCG Pput_0156 159858 - 161087 + | nucleoside recognition domain-containing protein Pput_0157 161704 - 161069 - | ABC-type uncharacterized transport system auxiliary component-like protein Pput_0158 162639 - 161701 - | hypothetical protein Pput_0159 163434 - 162643 - | ABC transporter related Pput_0160 164564 - 163431 - | hypothetical protein TERM 145 163511 - 163493 - G 75 -3 -4.93296 | opp_overlap 163502, overlap 163497 CGATGACCACAAAAA TCGACTGC ACC ACTGCCGA GGTGGTGTGTGCCCC Pput_0161 165791 - 164766 - | hypothetical protein TERM 146 165837 - 165811 - R 78 -6.4 -4.73682 | opp_overlap 165818, overlap 165813 GGCTACAACAGAAAA GTGAGGTGGCTG TGC CAGCCTCTTCGC GGGCAAGCCTGCGAA Pput_0162 167291 - 165885 - | peptidase M16 domain-containing protein Pput_0163 168980 - 167322 - | sodium-dependent inorganic phosphate (Pi) transporter TERM 147 167521 - 167546 + g 78 -6.9 -4.56597 | gap 1, overlap 167510 TGGGCGTGTGCGAGG CGCC-GTTCC TGGGCAC GGAACCGGCG TTTTTCCCGCAGCAG TERM 148 169067 - 169108 + r 70 -5.1 -4.41348 | overlap 169069 169070 GCTCACTCAAAGCTT TAGCTGTTTTGCCAAGCTG TCGC CAGCTTCGCATGGCAGTCA TTTATTTGAAACAGA TERM 149 169248 - 169210 - R 90 -5.3 -5.38951 | gap 1, opp_overlap 169221, overlap 169221 AACGCACAGAAAAAA GGCATGAAAAAGGGCCCT GCGA AGGGCCCTTGTTG-TGCA GCACTTCCTTGGCCT TERM 150 169238 - 169221 - R 100 -12.7 -4.79667 | opp_overlap 169221, overlap 169210 AAAAGGCATGAAAAA GGGCCCT GCGA AGGGCCC TTGTTGTGCAGCACT TERM 151 169221 - 169238 + r 85 -12.7 -3.79113 | opp_overlap 169221 169210 AAAAGGCATGAAAAA GGGCCCT GCGA AGGGCCC TTGTTGTGCAGCACT Pput_0164 170033 - 169263 - | integral membrane protein TerC Pput_0165 171410 - 170103 - | CitMHS family citrate/H+ symporter Pput_0166 171678 - 172079 + | glutathione-dependent formaldehyde-activating, GFA Pput_0167 174064 - 172118 - | hypothetical protein TERM 152 172320 - 172339 + g 73 -11.4 -3.59979 | CGCTTGCGCTCTTCT GGCTGCGG CAGC CCGTAGCC TTTGGAGTCGAGCAA TERM 153 172574 - 172522 - G 74 -12.1 -3.50853 | gap 3 CCTGCTCAAGCAGAA GCAGTGCCGC-GCTGGTGCG-C-AGG TCAG CCTTGGCGAACCAGCTACGGCGCTGC TCGGCATTGAGGGCC TERM 154 172946 - 172979 + g 70 -11.7 -3.1552 | overlap 172944 172952 GTTGAGCTTCAAGGG CACCGAGGCCAGGCT GCGC AGCTCGGTCTTGGTG TATTCGTCGATCACC Pput_0168 174390 - 174070 - | hypothetical protein Pput_0169 174720 - 174427 - | hypothetical protein Pput_0170 175127 - 174810 - | hypothetical protein TERM 155 174920 - 174888 - G 76 -10.6 -3.87994 | gap 2 ACGGATGTGTACAAA GGCGCTTTCCAGTCGG GCG CCG-C-GGATAGCGCC CTGGGTGCCGACGAA TERM 156 175394 - 175371 - R 100 -14.6 -5.4505 | opp_overlap 175371 TCGGGCAATAAAAAA CCCGCTGCAG TTAC CTGCAACGGG TTTGGGGAATTCACG TERM 157 175371 - 175394 + r 79 -12.4 -3.57561 | opp_overlap 175371 TCGGGCAATAAAAAA CCCGCTGCAG TTAC CTGCAACGGG TTTGGGGAATTCACG Pput_0171 175654 - 175439 - | hypothetical protein TERM 158 176078 - 176043 - R 70 -11.2 -3.03159 | gap 1, opp_overlap 176054, overlap 176053 GCAAGCCCGCGAAGA GGC-CGGAACAGCGG AGGCAGG CCGCCGTTCCGTACC CCATCTGGATTAGCT Pput_0172 177581 - 176088 - | Acetyl-CoA hydrolase TERM 159 177709 - 177734 + r 71 -11.1 -3.06686 | gap 1, opp_overlap 177710, overlap 177706 GATCAATAAAAGAAA AGCCCCGG-CAG ATT CTGACCGGGGCC TCCTTTATATCAGCT TERM 160 177733 - 177710 - R 100 -14.6 -5.28831 | gap 1, opp_overlap 177709 177706 ATCAATAAAAGAAAA GCCCCGG-CAG ATT CTGACCGGGGC CTCCTTTATATCAGC Pput_0173 179204 - 177768 - | NAD(P)(+) transhydrogenase (AB-specific) Pput_0174 179521 - 179207 - | NAD/NADP transhydrogenase alpha subunit-like protein Pput_0175 180654 - 179533 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 161 180559 - 180579 + g 71 -6.2 -4.30833 | gap 1 CCGTTGAACGGTGAC CTGA-TGGC CCTG GCCAATCAG TTTCTTGATGGTTTC TERM 162 180597 - 180611 + g 71 -11.4 -3.49102 | TCTTGATGGTTTCGG GGGTCG CAG CGACCC TTGTCTCACCGGTCT Pput_0176 181991 - 181074 - | LysR family transcriptional regulator Pput_0177 182152 - 183333 + | acyl-CoA dehydrogenase domain-containing protein Pput_0178 183347 - 184567 + | Formyl-CoA transferase TERM 163 184571 - 184604 + T 100 -16.7 -5.26918 | opp_overlap 184573 184575, overlap 184575 GGTGTGCTCTAGATG AATAGCGGGGAGGCC GTCA GGCCTCCCCGCTTTG TTTTTTCTGCGCTAT TERM 164 184602 - 184573 - T 100 -19.3 -3.25823 | opp_overlap 184571 184575, overlap 184575 TGTGCTCTAGATGAA TAGCGGGGAGGCC GTCA GGCCTCCCCGCTT TGTTTTTTCTGCGCT TERM 165 184575 - 184600 + T 100 -21.9 -5.13354 | opp_overlap 184573 184575, overlap 184571 TGCTCTAGATGAATA GCGGGGAGGCC GTCA GGCCTCCCCGC TTTGTTTTTTCTGCG TERM 166 184600 - 184575 - T 100 -21.9 -3.19602 | opp_overlap 184575 184571, overlap 184573 TGCTCTAGATGAATA GCGGGGAGGCC GTCA GGCCTCCCCGC TTTGTTTTTTCTGCG TERM 167 184721 - 184703 - T 82 -6 -4.87291 | opp_overlap 184703 CATCGGAACGAAAAA CTCCTTGA GAT TCAATGAG TTAAGTAGTGAAGGC TERM 168 186712 - 186722 + T 70 -3.2 -4.77036 | AATTGCTTGATTCAT TGTC GAA GACG TTTTTCCTGGTCAGA TERM 169 190101 - 190139 + T 100 -17.7 -3.6502 | gap 1, opp_overlap 190107, overlap 190102 190107 GTCAAGATTCATTTC G-CAAAACCCCTATCTGC ACAT GCAGGTAGGGGTTTTGTC TTTAAGTAGGAACTA TERM 170 190102 - 190137 + T 100 -21.4 -3.40597 | opp_overlap 190107, overlap 190101 190107 TCAAGATTCATTTCG CAAAACCCCTATCTGC ACAT GCAGGTAGGGGTTTTG TCTTTAAGTAGGAAC TERM 171 190132 - 190107 - T 95 -13.3 -4.09864 | opp_overlap 190102 190101 190107 ATTCATTTCGCAAAA CCCCTATCTGC ACAT GCAGGTAGGGG TTTTGTCTTTAAGTA TERM 172 190107 - 190132 + T 100 -15.5 -4.80455 | opp_overlap 190107, overlap 190102 190101 ATTCATTTCGCAAAA CCCCTATCTGC ACAT GCAGGTAGGGG TTTTGTCTTTAAGTA TERM 173 190324 - 190362 + T 100 -20.4 -4.70879 | opp_overlap 190325 190330, overlap 190326 190330 TCGTCAAGATTCAAA CTCAAAGCCCCTGTCTGC GAT GCAGACAGGGGCTTTGTC TTTTTCGGGTTTCAA TERM 174 190361 - 190325 - T 100 -23.9 -2.85503 | opp_overlap 190324 190326 190330, overlap 190330 CGTCAAGATTCAAAC TCAAAGCCCCTGTCTGC GAT GCAGACAGGGGCTTTGT CTTTTTCGGGTTTCA TERM 175 190326 - 190360 + T 100 -27.4 -3.9654 | opp_overlap 190325 190330, overlap 190324 190330 GTCAAGATTCAAACT CAAAGCCCCTGTCTGC GAT GCAGACAGGGGCTTTG TCTTTTTCGGGTTTC TERM 176 190330 - 190356 + T 100 -22.4 -4.55887 | opp_overlap 190325 190330, overlap 190326 190324 AGATTCAAACTCAAA GCCCCTGTCTGC GAT GCAGACAGGGGC TTTGTCTTTTTCGGG TERM 177 190356 - 190330 - T 100 -22.4 -3.86311 | opp_overlap 190330 190326 190324, overlap 190325 AGATTCAAACTCAAA GCCCCTGTCTGC GAT GCAGACAGGGGC TTTGTCTTTTTCGGG Pput_0179 192870 - 190384 - | TonB-dependent siderophore receptor Pput_0180 193920 - 192964 - | anti-FecI sigma factor, FecR TERM 178 193677 - 193647 - G 71 -11.1 -3.40522 | gap 1, opp_overlap 193651 193657 193668, overlap 193659 ATCCTGCCATGACAA CGCCGCCAAGCAGC TTCA GC-GCCTGTCGGCG GCGCAGGCGCTGCTG TERM 179 193668 - 193697 + g 73 -11.3 -3.65425 | opp_overlap 193647 193659, overlap 193651 193657 193694 CAAGCAGCTTCAGCG CCTGTCGGCGGCG CAGG CGCTGCTGGCTGG TTTCCAGTGTCTGCA Pput_0181 194446 - 193925 - | ECF subfamily RNA polymerase sigma-24 factor Pput_0182 195224 - 194535 - | GntR family transcriptional regulator TERM 180 195931 - 195899 - g 78 -6.3 -4.66163 | gap 1 ATCCCCAGCGAAAAA CTG-CGCATCACCT ACGTCA AGGCGCTGCGGCAG AACCGGGCACACATG Pput_0183 195428 - 196189 + | hypothetical protein TERM 181 196169 - 196181 + F 77 -10.5 -3.72576 | opp_overlap 196156 CAGGCCGAAGGGTTC CCGGC CGA GCCGG TTTACTGAAGGAGCA TERM 182 196387 - 196407 + G 90 -14.1 -4.10429 | opp_overlap 196369 ACGACCCAGCGATGG TCGAGCTGA TGG TCAGCTCGA TTTTCGACAGTGGTT TERM 183 197744 - 197784 + G 78 -6.8 -4.66833 | gap 2, opp_overlap 197762 197763, overlap 197747 197771 CCTTCAACGCATTTT CGAGCTGCTGGGCCAGAATG CGG CGCTC-GGCCC-GCGGCTGG TTTTTGAAATTGGCG Pput_0184 196200 - 198146 + | diguanylate cyclase/phosphodiesterase TERM 184 198208 - 198192 - T 100 -15.1 -4.13014 | CCTAGAGCCGCAAAA GGGCCGC ATA GCGGCCC CAGGTTCACGTAGCG Pput_0185 199678 - 198302 - | HlyD family type I secretion membrane fusion protein TERM 185 198331 - 198366 + g 73 -3.2 -4.70169 | overlap 198313 198344 GCGCTTCCGAGCGCG CCTTCATGATCGGCTT GAGC AGGTAGCTCATGATGG TTTTCTTGCCTGTCA TERM 186 199590 - 199621 + g 81 -13.7 -3.59979 | GCTTTGTTTACCTCG GGCAGCGGCTGGC CGCCAA GCGAGTCGCTGCC TTTGAAATAGCGCCG Pput_0186 201824 - 199668 - | ABC transporter related TERM 187 201407 - 201433 + g 70 -12.9 -2.82933 | opp_overlap 201423 CATCGAACTTGTGCT GCGGCTGCGCG AAGAA CACGCGGCCGC TGTAGTCGCTTAGCA TERM 188 202395 - 202415 + G 76 -8.2 -4.14257 | GGTTATCGACCTCTG CCTGGCCG CATTC CGGCAAGG TTTGTGCTTATTCGG Pput_0187 202214 - 202531 + | hypothetical protein TERM 189 206672 - 206651 - g 72 -12.3 -3.33261 | overlap 206637 CCTGAACCTGGACAA GACCCCGGT CAGC ACCGAGGTC ACCGACGAGCCAGGT TERM 190 207708 - 207670 - g 71 -13.8 -2.65112 | overlap 207678 AAGTGACCGATACCA CCGACGAAGTGGTGGCCA AGC TGACTGCCACCCCGTCGG TCACCGAAGGCGGCG TERM 191 208863 - 208834 - g 70 -9.9 -3.54459 | overlap 208824 208823 208837 TCAAGGCCGGCGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 192 209523 - 209494 - g 70 -9.9 -3.54459 | overlap 209484 209483 209497 TCAAGGCCGGCGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 193 210180 - 210151 - g 70 -9.9 -3.54459 | overlap 210141 210140 210154 TCAAGGCCGGTGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 194 210837 - 210808 - g 70 -9.9 -3.54459 | overlap 210798 210797 210811 TCAAGGCCGGCGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 195 211937 - 211916 - g 72 -12.3 -3.33261 | overlap 211902 CCTGAACCTGGACAA GACCCCGGT CAGC ACCGAGGTC ACCGACGAGCCAGGT TERM 196 212151 - 212122 - g 70 -9.9 -3.54459 | overlap 212112 212093 212111 212125 TCAAGGCTGGTGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 197 212808 - 212779 - g 70 -9.9 -3.54459 | overlap 212769 212768 212782 TCAAGGCCGGCGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 198 213465 - 213436 - g 70 -9.9 -3.54459 | overlap 213426 213425 213439 TCAAGGCCGGCGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACC TERM 199 214122 - 214093 - g 70 -9.9 -3.54459 | overlap 214083 214082 214096 TCAAGGCCGGTGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACA TERM 200 214287 - 214249 - g 90 -19.6 -2.65112 | overlap 214257 AAGTGACTGACACCA CCGACGAAGTCGTGGCCA AGT TGACCGCGACCCCGTCGG TCACCGAAGGCGGTG TERM 201 214962 - 214924 - g 71 -13.8 -2.64735 | opp_overlap 214929 214948, overlap 214932 ATGTCACCGACACCA CCGACGAAGTCGTGGCCA AGT TGACCGCGACCCCTTCGG TCACCGAAGGCGGCG TERM 202 215637 - 215599 - g 71 -13.8 -2.64735 | opp_overlap 215604 215623, overlap 215607 ATGTCACCGACACCA CCGACGAAGTCGTGGCCA AGT TGACCGCGACCCCTTCGG TCACCGAAGGCGGCG TERM 203 216312 - 216274 - g 90 -19.6 -2.65112 | overlap 216282 AAGTGACCGATACCA CCGACGAAGTGGTGGCCA AGC TGACCGCCACCCCGTCGG TCACCGAAGGCGGCG TERM 204 220137 - 220108 - g 70 -9.9 -3.54459 | overlap 220098 220097 220111 TCAAGGCCGGTGAAA CCAGCGCGCCGTA CACC CACGACGCGCAAG GCGATGACGTCTACA TERM 205 220962 - 220924 - g 80 -16 -2.64735 | opp_overlap 220929 220932, overlap 220932 ATGTCACCGACACCA CCGACGAAGTCGTGGCCA AGC TGACCGCGACTCCTTCGG TCACCGAAGGCGGTG TERM 206 222282 - 222244 - g 80 -16 -2.64735 | opp_overlap 222249 222252, overlap 222252 ATGTCACCGACACCA CCGACGAAGTCGTGGCCA AGC TGACCGCGACTCCTTCGG TCACCGAAGGCGGTG TERM 207 222942 - 222904 - g 71 -13.8 -2.65112 | overlap 222912 AAGTGACCGACACCA CCGACGAAGTGGTGGCCA AGC TGACTGCCACCCCGTCGG TCACCGAAGGCGGCG TERM 208 224952 - 224914 - g 71 -13.8 -2.65112 | overlap 224922 224925 AAGTGACTGACACCA CCGACGAAGTAGTGGCCA AGT TGACCGCGACCCCGTCGG TGACCGAAGGCGGTG TERM 209 226272 - 226234 - g 71 -13.8 -2.64735 | opp_overlap 226258, overlap 226242 AGGTTACCGACACCA CCGACGAAGTGGTGGCCA AGT TGACCGCGACCCCGTCGG TGACCGAAGGCGGCG TERM 210 226749 - 226733 - g 83 -8 -4.59773 | opp_overlap 226732 CGGTACCGCCAAAAA CGGTGA TGACT TCACCG GTGTTGCGACCGTGA TERM 211 229100 - 229080 - g 71 -9 -3.73072 | AATGGCTTGAGCAAA GTCCAGGC TATCG GCCTGAAC AGCGATGTCACGCTG Pput_0188 202824 - 229916 + | hypothetical protein TERM 212 229962 - 229907 - f 80 -11 -3.82824 | gap 1, opp_overlap 229922 229923 229924, overlap 229921 229924 CATCATCCACAACAA GGACAGCTGACAGACTACCGGGGCCGC ACA GCGGCCCCGGCTCTTT-CCTGCTACCC GCCAACAGCGCATAC TERM 213 229949 - 229921 - f 77 -13.7 -2.90941 | opp_overlap 229922 229923 229924, overlap 229907 229924 AGGACAGCTGACAGA CTACCGGGGCCGC ACA GCGGCCCCGGCTC TTTCCTGCTACCCGC TERM 214 229922 - 229949 + F 88 -13.4 -3.78775 | gap 1, opp_overlap 229921 229907 229924, overlap 229923 229924 GGACAGCTGACAGAC TA-CCGGGGCCGC ACA GCGGCCCCGGCTC TTTCCTGCTACCCGC TERM 215 229923 - 229947 + F 100 -18.5 -3.48024 | opp_overlap 229921 229907 229924, overlap 229922 229924 GACAGCTGACAGACT ACCGGGGCCGC ACA GCGGCCCCGGC TCTTTCCTGCTACCC TERM 216 229924 - 229946 + F 100 -22 -2.68493 | opp_overlap 229921 229907 229924, overlap 229923 229922 ACAGCTGACAGACTA CCGGGGCCGC ACA GCGGCCCCGG CTCTTTCCTGCTACC TERM 217 229946 - 229924 - f 100 -22 -2.69977 | opp_overlap 229924 229923 229922, overlap 229921 229907 ACAGCTGACAGACTA CCGGGGCCGC ACA GCGGCCCCGG CTCTTTCCTGCTACC TERM 218 229981 - 230007 + F 71 -9.4 -3.72968 | gap 1, opp_overlap 229970, overlap 229982 229983 230001 AACAGCGCATACTCT GG-CGCCGGGC CTGCGC GCCCGGCGATC TTTGCCTATGCTGCT TERM 219 229982 - 230005 + F 72 -10.9 -3.44487 | opp_overlap 229970, overlap 229981 229983 230001 ACAGCGCATACTCTG GCGCCGGGC CTGCGC GCCCGGCGA TCTTTGCCTATGCTG TERM 220 229983 - 230004 + F 78 -14.4 -2.6621 | opp_overlap 229970, overlap 229982 229981 230001 CAGCGCATACTCTGG CGCCGGGC CTGCGC GCCCGGCG ATCTTTGCCTATGCT Pput_0189 230062 - 230403 + | hypothetical protein TERM 221 230531 - 230551 + F 71 -8.2 -4.02022 | opp_overlap 230533 CGCACGACTTGAACC CACACGGG AAATC CCCGTGCG TTTCTGATCGTTGCG Pput_0190 230602 - 231501 + | taurine dioxygenase Pput_0191 231519 - 232538 + | ABC transporter periplasmic-binding protein Pput_0192 232545 - 233408 + | ABC transporter related Pput_0193 233423 - 234286 + | binding-protein-dependent transport systems inner membrane component Pput_0194 235009 - 234404 - | hypothetical protein Pput_0195 235172 - 235966 + | Sel1 domain-containing protein Pput_0196 236174 - 236626 + | MarR family transcriptional regulator TERM 222 237335 - 237315 - g 86 -15.4 -3.64487 | GCATACCCTGAAGAA CGCCCGCG AATTG CGCGGGCG GATGATCCATCTGCT TERM 223 237676 - 237705 + G 87 -5.5 -5.1861 | gap 1 TGGCGTGCGGTGTAT CGC-CACTGGCGGC TGG GCCGCCTGACAGCG TTTTTTGATCGTGGC TERM 224 238132 - 238144 + G 74 -10.5 -3.7014 | overlap 238138 AACTCCAACCTTGCC GGCCC CGC GGGCC TTCTGTTCGCCTTTA Pput_0197 236623 - 238710 + | fusaric acid resistance protein region TERM 225 238824 - 238844 + G 70 -10.4 -3.65581 | overlap 238843 CGCCTGCATTTCTAC CGCCTGGT CTGGC ACCGGGCG TTGTTCAACGTTGCT Pput_0198 238707 - 238919 + | hypothetical protein Pput_0199 238916 - 239791 + | secretion protein HlyD family protein TERM 226 240993 - 240963 - g 71 -12.5 -3.01712 | opp_overlap 240954, overlap 240965 CCGCCTGGCGCAATA CAGCGCCTTGCTC GATCG GCGCGAGGCGCTG GCCGAGGCGGAGAAA Pput_0200 239788 - 241206 + | RND efflux system outer membrane lipoprotein Pput_0201 241307 - 242260 + | hypothetical protein TERM 227 242958 - 242979 + G 74 -11.6 -3.53761 | opp_overlap 242973 CCTGGCCTTGGGTAT CGACGGCA CCGAAA TGCCGTCG TTTGCCGACCAATTG Pput_0202 242341 - 244284 + | cytochrome c, class I TERM 228 244326 - 244285 - T 72 -13 -2.52543 | gap 1, opp_overlap 244284, overlap 244263 ACTGCGGCCAACTGA CTG-GAGCCTGCGCGGTCC TGCAG GGCCCGCGCAAGGTCTCAG ATCTTGCGCGAGCCT Pput_0203 244592 - 244347 - | hypothetical protein Pput_0204 244964 - 244662 - | hypothetical protein Pput_0205 245112 - 245774 + | glutathione S-transferase domain-containing protein TERM 229 245803 - 245842 + T 72 -10.9 -3.53012 | gap 2, opp_overlap 245803 TCATTCGCGGGTAAA CCCGCTCCTAC--CGGT AAAGCACA ACCGTTGTAGGAGCGGG TTTACCCGCGAACGA TERM 230 245842 - 245803 - T 72 -10.9 -3.53444 | gap 2, opp_overlap 245803 TCATTCGCGGGTAAA CCCGCTCCTAC--CGGT AAAGCACA ACCGTTGTAGGAGCGGG TTTACCCGCGAACGA Pput_0206 247380 - 245881 - | argininosuccinate lyase TERM 231 247793 - 247809 + G 76 -7.9 -4.25283 | overlap 247792 TGTGCGAACGCGAGG CGCCGCC GGC GGTGGTG TTTTGCTCCGGGGAT Pput_0207 247573 - 248316 + | LytTR family two component transcriptional regulator TERM 232 248952 - 248895 - g 75 -13.4 -3.09492 | GCGGCAACGTCAACA CCCGCC-TGGCGAAGCTGGATGCCGGCG AGTA CGACGCCATC-ATCCTCGCCGCGGCGGG CCTGATCCGTCTGGG hemC 248435 - 249376 + | porphobilinogen deaminase TERM 233 249497 - 249533 + G 90 -19.5 -2.52543 | opp_overlap 249487, overlap 249502 249517 TTGAACCTATTACCG TGCAAGCCCCACAGCGA CTG TCGCTGGAGGGCTTGCA TGACTTCCAGGCGAT TERM 234 250104 - 250134 + G 71 -12.7 -3.02511 | gap 2 TGCCACGGCCTTGCT GGCAGCCGTGCAGCG TAG CGCTGCAC--CTGCC TCTTAAGGCGCTAAG Pput_0209 249373 - 250140 + | uroporphyrinogen-III synthase Pput_0210 250186 - 251286 + | protein of unknown function DUF513, hemX TERM 235 251394 - 251427 + G 76 -8.1 -4.12188 | TATGGTGGTTTCCGT TATCAGTCGGGGCTG TGGG CAGCCTTGGCGGGTA TTTTGGCGGTCGTCC Pput_0211 251283 - 252521 + | HemY domain-containing protein TERM 236 252519 - 252567 + F 100 -16.8 -4.35646 | gap 1, overlap 252522 GAAGGCGTACGCGCC TGACCTACC-CCAAGGCCCGCGC AAAG GTGCGGGCTTTGGGGGCAGGTAA TTTATCTTTCGCTGT TERM 237 252522 - 252564 + F 95 -18.5 -3.15228 | gap 1, overlap 252519 GGCGTACGCGCCTGA CCTACC-CCAAGGCCCGCGC AAAG GTGCGGGCTTTGGGGGCAGG TAATTTATCTTTCGC Pput_0212 252744 - 253250 + | disulphide bond formation protein DsbB Pput_0213 253482 - 253952 + | anti-RNA polymerase sigma 70 factor Pput_0214 254599 - 253961 - | peptidylprolyl isomerase, FKBP-type Pput_0215 254778 - 255800 + | alginate regulatory protein AlgP Pput_0216 256258 - 255779 - | hypothetical protein TERM 238 255878 - 255911 + g 78 -14.5 -3.03159 | overlap 255867 255907 CAGCCGGGCCAGCCA GTCGTCCGCGGGCTC ATGG GAGCCCACGGGCCAC TGTTGCGAGCGTTCC TERM 239 256688 - 256664 - g 81 -13.5 -3.57971 | ACAGTGAGCTGGAAA GCGCCGACGGC TAT ACCGCCGACGC CCGTGCGCGCAAGTT TERM 240 256993 - 257007 + G 71 -11.4 -3.53091 | opp_overlap 256993 CTCAACTTGTACAAA GGCGGT TAC ACCGCC TTTGAGCGCACCCGT TERM 241 257007 - 256993 - g 79 -11.4 -3.89614 | opp_overlap 256993 CTCAACTTGTACAAA GGCGGT TAC ACCGCC TTTGAGCGCACCCGT TERM 242 257968 - 257935 - g 79 -8.1 -4.35091 | gap 1, opp_overlap 257946, overlap 257937 AAGACCGACAAGAAA GCCCAGCGCCAGGCTG CCG CAGCCTTGCG-TCAGC AGTTGGCACCGCACA Pput_0217 256309 - 258219 + | ABC transporter related Pput_0218 258219 - 258806 + | hypothetical protein TERM 243 258801 - 258787 - f 75 -5.7 -4.55295 | overlap 258789 CCCTGCACAAAGAAA CAGCT GCCGA AGCTG ACTGAGCCTGCACCG Pput_0219 259005 - 259637 + | lysine exporter protein LysE/YggA TERM 244 259680 - 259651 - T 100 -19.3 -2.89055 | opp_overlap 259647 259646 259644, overlap 259640 GAAAGGCCGCATACA GGCCATTCGCGGG CAAG CCCGCGATTGGCC CATCACTCTTTCTCC Pput_0220 260444 - 259683 - | band 7 protein TERM 245 260452 - 260472 + r 72 -12.5 -2.52896 | ATGGTCATTCTCCTT GCGTCGCTG GGG CGGCGGCGC TCACTTCCAGCATCA Pput_0221 261787 - 260441 - | hypothetical protein Pput_0222 261886 - 262344 + | YbaK/prolyl-tRNA synthetase associated region TERM 246 262392 - 262359 - f 75 -11.7 -3.51411 | gap 1, opp_overlap 262368, overlap 262355 262360 ATGTTTTCAAACCAA TGCCAGGC-AGGCGTC GTG GACGGCTTGCCTGGCG CTAAGGAGGAACCAT TERM 247 262391 - 262360 - f 80 -15.2 -2.70525 | gap 1, opp_overlap 262368, overlap 262359 262355 TGTTTTCAAACCAAT GCCAGGC-AGGCGTC GTG GACGGCTTGCCTGGC GCTAAGGAGGAACCA Pput_0223 262406 - 262648 + | hypothetical protein TERM 248 262663 - 262650 - f 75 -5.9 -4.64861 | opp_overlap 262660 GCCCCCGAAAATAAA GCGCC GAGC GGCAC CTGACGAGTGATCGG Pput_0224 262718 - 263356 + | hypothetical protein Pput_0225 263800 - 263363 - | CBS domain-containing protein Pput_0226 265728 - 263971 - | hypothetical protein TERM 249 264787 - 264841 + g 73 -12.7 -3.15544 | gap 1 CGGGATCTGGTTGGT G-GCCAGGCCACCGGTCAGGTTGACG ATCT CGGCACCCTTGCCGCTGGCCGGGCGC TTGGTGAAGCTGGCC TERM 250 265860 - 265825 - H 100 -16.2 -3.87373 | opp_overlap 265832, overlap 265832 GACATGGCGCACAAA CGAAAAAGCCCCGGGC TCAG GCCCAGGGCTTTCTTG ATATGGCGCACTCGG TERM 251 265832 - 265853 + H 93 -12.9 -4.29106 | opp_overlap 265825 265832 CGCACAAACGAAAAA GCCCCGGGC TCAG GCCCAGGGC TTTCTTGATATGGCG TERM 252 265853 - 265832 - H 100 -15.1 -5.04601 | opp_overlap 265832, overlap 265825 CGCACAAACGAAAAA GCCCCGGGC TCAG GCCCAGGGC TTTCTTGATATGGCG gabD 266409 - 267851 + | succinate-semialdehyde dehydrogenase I TERM 253 267861 - 267831 - f 73 -8.5 -4.06502 | overlap 267857 TACCTCGAAATCAAA TACCTGTGC-ATCAG CGT CTGATAGCAC-GGTA AAGGCTTTACCTCTG TERM 254 267875 - 267909 + F 100 -12.1 -5.15969 | gap 1, overlap 267876 TAAAGGCTTTACCTC TGCCAGCGGGGCG-CG AGAG CGACGTCTCGCTGGCC TTTTTTACATTGCAG TERM 255 267876 - 267908 + F 91 -15.6 -3.68859 | gap 1, overlap 267875 AAAGGCTTTACCTCT GCCAGCGGGGCG-CG AGAG CGACGTCTCGCTGGC CTTTTTTACATTGCA TERM 256 268021 - 268003 - f 73 -5.2 -4.63218 | CGCCCCCGAATAAAA GCGCCA TTCCTGT CGGCGC AATGAGGGCATTATG TERM 257 269010 - 268994 - g 88 -4.4 -5.29445 | overlap 268995 TTCGAAGAAGAAAAA CTGCTG GACCG CAGCAA GGCTGTGGGTGAGCG Pput_0229 268034 - 269311 + | 4-aminobutyrate aminotransferase TERM 258 269333 - 269346 + F 100 -9.5 -5.60993 | opp_overlap 269333 GCGCTTCAGAAAAAA CCCGC CTCG GCGGG TTTTTTTATGCCCAG TERM 259 269346 - 269333 - f 100 -9.5 -5.24129 | opp_overlap 269333 GCGCTTCAGAAAAAA CCCGC CTCG GCGGG TTTTTTTATGCCCAG Pput_0230 269449 - 270708 + | putative signal transduction protein Pput_0231 271839 - 270811 - | diguanylate cyclase with PAS/PAC sensor Pput_0232 273123 - 271939 - | fatty acid desaturase TERM 260 272077 - 272103 + g 75 -4.2 -4.75372 | GTTGGCACTGGTGCG CGCCCAGATCTG CTG CAGGGCCAGGCG TTTTTCGTAGATGGT Pput_0233 273270 - 275165 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 261 275170 - 275186 + T 75 -13.7 -2.64651 | opp_overlap 275183, overlap 275168 275167 275183 GCTGGGATTGAGAGC GGGCTGC AAA GCAGCCC TGGATTTCAGCGCTT Pput_0234 275837 - 275193 - | binding-protein-dependent transport systems inner membrane component TERM 262 275583 - 275541 - G 74 -9.3 -3.91488 | overlap 275542 AATCCGCGCAAAGAA CG-GTGTGGCGGCAATGGT CAGCGGC ACCACTGCCGCC-CACACA CCATAAGTGGTACCC Pput_0235 276936 - 275827 - | ABC transporter related TERM 263 276385 - 276411 + g 76 -10 -3.85698 | CTCGGGGGTGTGCAC CAGTGCCCGGGC AAT GCCCACGCGCTG TTTCTGCCCGCCGGA Pput_0236 277738 - 276938 - | NLPA lipoprotein TERM 264 277216 - 277232 + g 74 -5.1 -4.66833 | overlap 277217 GTTGCACCGCCTCGA CCTGAAG GAT CTTCAGC TTTTTCGGGTTGGCG TERM 265 277302 - 277335 + g 76 -13.7 -3.1478 | opp_overlap 277301, overlap 277301 TTCAGGGTGATCAAC CCGGCCTTGGCCAGC AGCA GCAGGCCACGGCCGC TGTTGATCGGGTCGT Pput_0237 279116 - 277731 - | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Pput_0238 280297 - 279116 - | acyl-CoA dehydrogenase type 2 TERM 266 280194 - 280231 + g 73 -13.3 -3.15249 | gap 1, opp_overlap 280172 TCGGCCAGCGGCAGG CGGCGCTCGCGGTCGCGC AAG GCGCTGTCGCG-GCGCAG TTGCTGGGCGATGTC Pput_0239 281680 - 280439 - | acyl-CoA dehydrogenase type 2 TERM 267 281081 - 281128 + g 78 -9.9 -4.07568 | gap 3, opp_overlap 281066 281065 281096 GCGCAACCCCGGGCT GCCC-CGGCGCACGAATGCCAGGC GCT GGC-GGCCTTCGT-CGTCGAGGGC TTTTACCGCCACCCA TERM 268 281807 - 281818 + r 71 -7.2 -4.053 | overlap 281803 CAGATGTGTGCTGGT CCGG TGGT CCGG TTTATATACCCTAAT Pput_0240 282756 - 281998 - | putative amino-acid ABC transporter ATP-binding protein YecC TERM 269 282059 - 282076 + g 71 -8.3 -3.91084 | GTACGTTCTTCCTTC GGCGCCG CGAA CAGCGCC TTTGCTTCGCCCTGC Pput_0241 283427 - 282759 - | polar amino acid ABC transporter, inner membrane subunit TERM 270 283394 - 283366 - G 93 -18.2 -3.34222 | overlap 283367 AGCAGCACCGTATAA CCCGCGCCCTTC AGCAG GAAGGGCGCGGA ATCGACAACGAGTTG TERM 271 283393 - 283367 - G 90 -19.5 -2.60212 | overlap 283366 GCAGCACCGTATAAC CCGCGCCCTTC AGCAG GAAGGGCGCGG AATCGACAACGAGTT Pput_0242 284218 - 283424 - | cystine transporter subunit Pput_0243 284526 - 285458 + | Serine O-acetyltransferase TERM 272 287164 - 287189 + G 71 -11.1 -3.40309 | TTGATTCGCTGAAGT CGGCAGTGGTG CTGA CGTCGCTGCCG TTCTCGCTCATTCTG Pput_0244 285729 - 287732 + | choline/carnitine/betaine transporter tauD 288731 - 287856 - | taurine dioxygenase Pput_0246 289577 - 288738 - | binding-protein-dependent transport systems inner membrane component tauB 290362 - 289574 - | taurine transporter ATP-binding subunit TERM 273 289922 - 289948 + g 71 -13.6 -2.57132 | overlap 289921 289924 CCGAGGGGCAGCCGC CAGCGCCCGGGC AAG GCCCACGCGCTG CTTCTGGCCACCGGA Pput_0248 291347 - 290376 - | taurine ABC transporter, periplasmic binding protein TERM 274 291186 - 291200 + g 80 -5.6 -4.77036 | overlap 291176 291175 TTTGCGCCAGTCGAT GCTGGC CTT GCTGGC TTTTTCGTAGTCGCC Pput_0249 291866 - 293206 + | outer membrane porin TERM 275 293210 - 293257 + F 87 -17.3 -2.82291 | gap 1, opp_overlap 293225, overlap 293225 AGCTTCCTGTAAGTC GTAGCCACAAAGAAAGCCTCGC CTAGT GCGAGGCTTT-TTTGTGCCTGC TAGTTCGTATGCGTT TERM 276 293243 - 293225 - f 95 -11.7 -4.57482 | opp_overlap 293210 293225 GTAGCCACAAAGAAA GCCTCGC CTAGT GCGAGGC TTTTTTGTGCCTGCT TERM 277 293225 - 293243 + F 100 -11.7 -5.28778 | opp_overlap 293225, overlap 293210 GTAGCCACAAAGAAA GCCTCGC CTAGT GCGAGGC TTTTTTGTGCCTGCT TERM 278 293280 - 293297 + F 78 -4.3 -4.855 | opp_overlap 293284 TATGCGTTATGGTTA TAAATAA ATCG TTATTTA TTCTTTTTATTTTTA Pput_0250 293372 - 294010 + | peroxidase TERM 279 294053 - 294070 + F 100 -12.7 -5.29782 | CAAGCAGGGATTTTC GGGCCGT TTCG ACGGCCC TTTTTTATGCCTGTA Pput_0251 294229 - 294822 + | NAD(P)H-dependent FMN reductase Pput_0252 294908 - 295873 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 280 296386 - 296373 - g 76 -8.1 -4.19238 | GCTGGAAGGCGAAAA CGTCG ATTA CGACG GTAAGCACATCCAGG Pput_0253 295933 - 297081 + | alkanesulfonate monooxygenase Pput_0254 297092 - 297889 + | binding-protein-dependent transport systems inner membrane component ssuB 297886 - 298698 + | aliphatic sulfonates transport ATP-binding subunit Pput_0256 298726 - 298941 + | TOBE domain-containing protein Pput_0257 299716 - 299084 - | TetR family transcriptional regulator TERM 281 299633 - 299689 + g 75 -12.2 -3.5393 | gap 2, opp_overlap 299635 CCCTTGCTCGGCCAA CAGCTCACGCGCAGCC-G-CCAGGATCG CCT CGATCCTGGCCTGGCTGCTGGCGCGCGG TTTGCGCGGGGTGGT TERM 282 299687 - 299635 - G 81 -15.6 -3.01712 | gap 2, opp_overlap 299633 CTTGCTCGGCCAACA GCTCACGCGCAGCC-G-CCAGGATCG CCT CGATCCTGGCCTGGCTGCTGGCGCGC GGTTTGCGCGGGGTG Pput_0258 301308 - 299716 - | glutamate--cysteine ligase TERM 283 300394 - 300406 + g 72 -7.7 -4.2349 | CTTGGGGCGGATGTT CGAGT AGT ACTCG TTTTCGATCTGCAGA Pput_0259 301830 - 301447 - | thioesterase superfamily protein TERM 284 301662 - 301630 - G 71 -10.7 -3.53012 | gap 2 GCTTTGCTGGTCAAA GCCAT-GG-CTGGCC GAGCA GGCCAGGCCCATGGC GATATCCACCAGGCT Pput_0260 304154 - 301830 - | RNA-binding S1 domain-containing protein TERM 285 301948 - 301965 + g 73 -12.7 -3.18199 | overlap 301964 CGGCTGCCACCATTG CCGCGGT TACC ACCGCGG TTGCCTTCGACCTTC TERM 286 302146 - 302125 - G 77 -14.5 -2.88249 | GACAGCGCCGAGATA TGCACCAGG CCGT CCTGGTGCA CGCCGATGTCGACGA ompR 304372 - 305112 + | osmolarity response regulator TERM 287 305353 - 305317 - g 88 -8.8 -4.71426 | opp_overlap 305326 CGCCGACGAAGAAAA CCGCGACAAGATC-GCCG AGG CGGCAGGTCTTATC-CGG GTGACCGGCTCGGGT TERM 288 305600 - 305618 + G 80 -5.3 -4.87665 | gap 1 GCCATTGGCTTGTTG TCCACAGC ATCG GC-GTGGA TTTTTGTGCGTCAGC Pput_0262 305126 - 306439 + | integral membrane sensor signal transduction histidine kinase TERM 289 306505 - 306466 - T 75 -11.4 -3.53012 | opp_overlap 306491, overlap 306492 CTCTTCGCGGTTAAA GCCGCTCCTACAGGGACT CTGC AATACCTGTGGCAGCGGC TTAGCCGCGAAGAGG TERM 290 306522 - 306549 + T 71 -11.3 -3.16191 | opp_overlap 306492, overlap 306491 306529 TAGCCGCGAAGAGGC GGGCACAGGCT TGAATC AGCCTTTGCCC TTGGTCCGGGTCTGA Pput_0263 307442 - 306537 - | alpha-L-glutamate ligase Pput_0264 307978 - 307439 - | hypothetical protein TERM 291 307471 - 307483 + g 71 -6.2 -4.28188 | overlap 307468 CAGGGGAAAGGGTGG CCGG GAAGG CCGG TTTGTCTTGTACGTA TERM 292 308054 - 308043 - g 75 -3.6 -4.85599 | GGGATGGCACAAAAA GCCG AAGA CGAC GACAAGGTTCGCCTG Pput_0265 308031 - 308432 + | RNA-binding S4 domain-containing protein TERM 293 308454 - 308434 - T 88 -16.9 -3.10641 | GAAGTTACGATTGAA TGGGGCTGC TGC GCAGCCCCA GGAATCTAGCGCAAC Pput_0266 309254 - 308460 - | phosphoesterase, PA-phosphatase related hslO 309375 - 310274 + | Hsp33-like chaperonin TERM 294 310335 - 310295 - f 82 -13.4 -3.50929 | gap 1, opp_overlap 310292 310290 310287 310307 310308, overlap 310287 310284 310296 TAAATCACAGGATAA TCTCCTGTC-GAATTGCGC AAAA GCGCAGTTCTGACAGGAGG GGCCTACTTTTTTTG TERM 295 310334 - 310296 - f 85 -16.9 -2.69834 | gap 1, opp_overlap 310292 310290 310287 310307 310308, overlap 310287 310284 310295 AAATCACAGGATAAT CTCCTGTC-GAATTGCGC AAAA GCGCAGTTCTGACAGGAG GGGCCTACTTTTTTT TERM 296 311318 - 311305 - g 76 -8.1 -4.15565 | CGCAGTACTGGAAAA CGTCG TTCT CGACG CCAACAAGCACGCCG Pput_0268 310454 - 311995 + | phosphoenolpyruvate carboxykinase TERM 297 312037 - 312020 - f 100 -14.1 -4.05714 | opp_overlap 312020 AGCCGCAACGAGAAA GCCGCCC CCAG GGGCGGC TTTTTTGTGGATGCG TERM 298 312020 - 312037 + F 100 -14.1 -5.28176 | opp_overlap 312020 AGCCGCAACGAGAAA GCCGCCC CCAG GGGCGGC TTTTTTGTGGATGCG TERM 299 312366 - 312383 + G 100 -5.5 -5.40072 | overlap 312368 GAACGGCCACATCGC CGGTGCA ACGG TGCACGG TTTTTTTGAAACCGC Pput_0269 312277 - 312717 + | thioesterase superfamily protein TERM 300 312722 - 312743 + T 93 -10.8 -4.63218 | opp_overlap 312722 GGCAGGCATAAAAAA GCCCCGCT GGCAGG GGCGGGGC TTTTGTTGCCGGGGG TERM 301 312743 - 312722 - T 100 -10.1 -5.28176 | opp_overlap 312722 GGCAGGCATAAAAAA GCCCCGC TGGCAGGG GCGGGGC TTTTGTTGCCGGGGG TERM 302 312780 - 312792 + T 72 -10.5 -3.51825 | CCTCAGGCGTTAGTC GCGCC AGT GGCGC TTGTGCTTGCGGTGG Pput_0270 313256 - 312774 - | 17 kDa surface antigen TERM 303 313441 - 313417 - R 83 -11.3 -3.96624 | opp_overlap 313417 GACCTTTATGACAAA GCCCTGAGCCG CCA CGGAACAGGGC TTTTTTCATTTTTAC TERM 304 313417 - 313441 + r 100 -11.3 -5.54079 | opp_overlap 313417 GACCTTTATGACAAA GCCCTGAGCCG CCA CGGAACAGGGC TTTTTTCATTTTTAC Pput_0271 315798 - 313453 - | oxidoreductase alpha (molybdopterin) subunit Pput_0272 316634 - 315804 - | formate dehydrogenase family accessory protein FdhD TERM 305 316276 - 316302 + g 78 -6.5 -4.66833 | gap 1, opp_overlap 316265 316276, overlap 316279 CACAGCCCGCAACCA CTGGTGCCGGCC AGTT GGC-GGCGCTGG TTTTTCAGGTTCCAG Pput_0273 316810 - 317250 + | hypothetical protein Pput_0274 318024 - 317362 - | HAD family hydrolase nudE 318089 - 318655 + | ADP-ribose diphosphatase NudE Pput_0276 318652 - 319470 + | 3'(2'),5'-bisphosphate nucleotidase TERM 306 319524 - 319508 - T 88 -15.1 -3.53012 | opp_overlap 319503 319518, overlap 319518 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CGGCAATTCTGGCGG TERM 307 319518 - 319562 + T 74 -10.7 -3.56092 | gap 1, opp_overlap 319508 319518 319552, overlap 319503 CGAAAGGGCCGCAAA GCGGCCCCGGCAATTCTGGC GGCGAA GCT-GAAATCCTGGGGCCGC TTTGCGGCCTCATCG Pput_0277 320072 - 319617 - | thioesterase domain-containing protein Pput_0278 321478 - 320072 - | two component, sigma54 specific, Fis family transcriptional regulator Pput_0279 323289 - 321475 - | integral membrane sensor signal transduction histidine kinase TERM 308 323319 - 323298 - R 74 -10.9 -3.70037 | opp_overlap 323297 323298 323315, overlap 323312 CAATCATCAGGTAAA TGCGCCAGA AAAG TCTGACGCA ATTATGCGCTAGTTA Pput_0280 323877 - 323332 - | dTDP-4-dehydrorhamnose 3,5-epimerase Pput_0281 324156 - 325262 + | agmatine deiminase TERM 309 325302 - 325279 - f 100 -14.6 -4.24342 | opp_overlap 325279 325282, overlap 325282 CGCGTGATGAATAAA GAAGCCCGTC ATGT GACGGGCCTC TTTTTTGCGCGGGCG TERM 310 325279 - 325302 + F 100 -12.4 -5.00616 | opp_overlap 325279 325282, overlap 325282 CGCGTGATGAATAAA GAAGCCCGTC ATGT GACGGGCCTC TTTTTTGCGCGGGCG TERM 311 325299 - 325282 - f 93 -12.7 -4.24413 | opp_overlap 325279 325282, overlap 325279 GTGATGAATAAAGAA GCCCGTC ATGT GACGGGC CTCTTTTTTGCGCGG TERM 312 325282 - 325299 + F 75 -12.7 -3.07655 | opp_overlap 325282 325279, overlap 325279 GTGATGAATAAAGAA GCCCGTC ATGT GACGGGC CTCTTTTTTGCGCGG TERM 313 325377 - 325395 + F 70 -11.6 -2.88999 | opp_overlap 325370 AGCAGATAGCGAGAT GGCACGGC CAG GCCGCGCC TCTGATCTGTAACAA Pput_0282 325457 - 325654 + | hypothetical protein Pput_0283 327790 - 325721 - | TonB-dependent siderophore receptor Pput_0284 328265 - 329584 + | outer membrane porin Pput_0285 331405 - 329735 - | glutamate synthase (NADPH) Pput_0286 333018 - 331651 - | integral membrane sensor signal transduction histidine kinase Pput_0287 333739 - 333020 - | two component transcriptional regulator TERM 314 333761 - 333749 - H 86 -7.7 -4.87665 | opp_overlap 333760 GCTCATGCAGAAAAA CACCT GTT AGGTG AGGGCCGGCGGCGCT Pput_0288 333880 - 336177 + | TonB-dependent siderophore receptor TERM 315 336307 - 336323 + T 100 -15.1 -4.20783 | opp_overlap 336281 TTCAAGGCCTGCGCT GGGCCGC CAA GCGGCCC TTTCTTACCTGGGCT Pput_0289 336534 - 336328 - | hypothetical protein TERM 316 336634 - 336680 + G 89 -12.5 -4.10925 | opp_overlap 336651 336666, overlap 336636 CGCCAGGTCACCGTA CATCTCGCATCCAGATATCTG GTTGA CAGATATCTGGATCAGAGATA TTTTCCACCCTATGT TERM 317 336636 - 336678 + G 86 -15.1 -3.64984 | opp_overlap 336651 336666, overlap 336634 CCAGGTCACCGTACA TCTCGCATCCAGATATCTG GTTGA CAGATATCTGGATCAGAGA TATTTTCCACCCTAT Pput_0290 336593 - 337069 + | hypothetical protein Pput_0291 337111 - 337584 + | helix-turn-helix domain-containing protein Pput_0292 338005 - 338220 + | hypothetical protein Pput_0293 338540 - 338217 - | hypothetical protein TERM 318 338797 - 338816 + r 95 -9.2 -5.1861 | opp_overlap 338797 GGGGAAAACAAAAAA GGCCCACC TTTC GGTGAGCC TTTTTTGGTACTGCG TERM 319 338816 - 338797 - R 100 -11.4 -5.79595 | opp_overlap 338797 GGGGAAAACAAAAAA GGCCCACC TTTC GGTGAGCC TTTTTTGGTACTGCG Pput_0294 339256 - 339008 - | hypothetical protein TERM 320 339652 - 339679 + H 74 -11.2 -3.22388 | CGTAATGGCGACTGT GCGCGGGCAGAC CTTG GTCTGGCCGAGC TTCCTACGTTCACTC Pput_0295 339782 - 340072 + | hypothetical protein TERM 321 340203 - 340160 - T 73 -8.6 -4.19258 | opp_overlap 340126 340163, overlap 340126 340161 AGATTGCACTGAAAA CGGGGGCCGCTTTGCGGCCC TTTC GCGACGCAAGGCCGCTCCCA CAAAAGCCGCTTGCG TERM 322 340163 - 340179 + T 88 -15.1 -3.53012 | opp_overlap 340126 340161 340160, overlap 340126 TTGCACTGAAAACGG GGGCCGC TTT GCGGCCC TTTCGCGACGCAAGG TERM 323 340372 - 340347 - T 71 -9 -3.77722 | opp_overlap 340352, overlap 340348 CGCAAGCAGGAATAA GCCAAGCGCT TGAAAT AGCGCTTGGA TCCAACAGGTAATCA TERM 324 340371 - 340348 - T 74 -12.5 -2.86151 | opp_overlap 340352, overlap 340347 GCAAGCAGGAATAAG CCAAGCGCT TGAAAT AGCGCTTGG ATCCAACAGGTAATC Pput_0297 341632 - 340427 - | hypothetical protein TERM 325 341716 - 341673 - R 70 -9.6 -3.53012 | gap 1 CTGTTCGCGGGTAAA CCCGCTCCTACGA-AGGTTCA GCA TAGGCCTGTTGTAGGAGCGGG CGTGCCCGCGAAGAA Pput_0298 342433 - 341744 - | polar amino acid ABC transporter, inner membrane subunit TERM 326 342453 - 342465 + r 75 -6.2 -4.66609 | opp_overlap 342451 342452 CAGCCCTCGCAAAGC CGCG AGCGG CGCG TTTTTCCATGAAATG Pput_0299 343125 - 342433 - | polar amino acid ABC transporter, inner membrane subunit Pput_0300 343932 - 343180 - | extracellular solute-binding protein Pput_0301 344717 - 343944 - | ABC transporter related TERM 327 344935 - 344922 - H 79 -3.7 -5.14563 | overlap 344907 GCCTTGATGAAAAAA GGCGC GATG GTGCC AGCTTTGGCCGGCGC Pput_0302 345349 - 346734 + | GABA permease TERM 328 346782 - 346757 - T 91 -16.1 -3.60151 | opp_overlap 346757 TGGCTGAAATGAGAA GGCCGCGCCCT GTGA AGGGTGCGGCC TTTTTTGTTGTCTGG TERM 329 346757 - 346782 + T 100 -18.3 -5.60689 | opp_overlap 346757 TGGCTGAAATGAGAA GGCCGCGCCCT GTGA AGGGTGCGGCC TTTTTTGTTGTCTGG Pput_0303 347381 - 346938 - | hypothetical protein TERM 330 347342 - 347354 + g 85 -10.5 -4.28323 | TGGCCTTGCTGGCGG CGCGC TTG GCGCG TTTCTGTTGCTTGGT TERM 331 347464 - 347445 - R 74 -11.4 -3.34455 | overlap 347389 GCACGATAAACCCAA GCAGCGCC CCTG AGCGCTGC AGCTTAGTGAGACGT Pput_0304 348549 - 347569 - | hypothetical protein TERM 332 348683 - 348642 - R 79 -13.2 -3.39328 | gap 1, opp_overlap 348646 348649 348656, overlap 348644 348656 AATGCGAAAAAATTA CAGGCAACAAAAAACCCGC ACTAG GCGGGTTTCTTGTTGTC-G CTTCGGGTAACTTTG TERM 333 348682 - 348644 - R 90 -16.9 -3.25177 | opp_overlap 348646 348649 348656, overlap 348642 348656 TGCGAAAAAATTACA GGCAACAAAAAACCCGC ACTAG GCGGGTTTCTTGTTGTC GCTTCGGGTAACTTT TERM 334 348646 - 348680 + r 81 -15.9 -2.53995 | opp_overlap 348644 348642 348656, overlap 348649 348656 CGAAAAAATTACAGG CAACAAAAAACCCGC ACTAG GCGGGTTTCTTGTTG TCGCTTCGGGTAACT TERM 335 348649 - 348677 + r 78 -11.8 -3.42354 | opp_overlap 348644 348642 348656, overlap 348646 348656 AAAAATTACAGGCAA CAAAAAACCCGC ACTAG GCGGGTTTCTTG TTGTCGCTTCGGGTA TERM 336 348670 - 348656 - R 95 -8.5 -5.49234 | opp_overlap 348649 348646 348656, overlap 348644 348642 ACAGGCAACAAAAAA CCCGC ACTAG GCGGG TTTCTTGTTGTCGCT TERM 337 348656 - 348670 + r 82 -8.5 -4.52415 | opp_overlap 348656 348644 348642, overlap 348649 348646 ACAGGCAACAAAAAA CCCGC ACTAG GCGGG TTTCTTGTTGTCGCT Pput_0305 349158 - 348886 - | hypothetical protein Pput_0306 350222 - 349155 - | A/G-specific adenine glycosylase Pput_0307 352465 - 350219 - | AsmA family protein TERM 338 351176 - 351205 + g 76 -11.3 -3.8186 | overlap 351179 GTTGGGCAGTGGTGT GGTGCCAGCACCG GCTA CGGCGCTGGCCTC TTGTTGCTTGACCTC TERM 339 351179 - 351202 + g 72 -13.8 -2.68947 | overlap 351176 GGGCAGTGGTGTGGT GCCAGCACCG GCTA CGGCGCTGGC CTCTTGTTGCTTGAC Pput_0308 352733 - 354394 + | major facilitator transporter TERM 340 354493 - 354437 - f 100 -20.3 -3.05384 | gap 3, opp_overlap 354437, overlap 354400 CCTTTCGCGACGCAA GGCCGCTCCCACAGGGACCGCG-TACGC TTCA GGGTTGCGCGGTCCCTGTGGG-G-GGCC TTGTGTCGCGATGGG TERM 341 354437 - 354493 + F 100 -22.5 -3.49475 | gap 3, opp_overlap 354400 354437 CCTTTCGCGACGCAA GGCCGCTCCCACAGGGACCGCGT-ACGC TTCA GGGTTGCGCGGTCCCTGTGGG-G-GGCC TTGTGTCGCGATGGG hisB 354625 - 355257 + | imidazoleglycerol-phosphate dehydratase hisH 355258 - 355896 + | imidazole glycerol phosphate synthase subunit HisH Pput_0311 355897 - 356157 + | hypothetical protein Pput_0312 356185 - 356922 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 342 357061 - 357039 - g 75 -12 -3.53811 | GCGACCCGGTGGAAA TCGCCCGTCG CTA CGACGAGCAA GGTGCTGACGAAATC Pput_0313 356933 - 357703 + | imidazole glycerol phosphate synthase subunit HisF TERM 343 357745 - 357803 + T 75 -12.5 -3.05384 | opp_overlap 357744 357745 CGTTCGCGACACAAG G-TCGTTCCCACCCGTACAGCGCTGAGCC TGA GGCTGA-TGCAGTACGTGTGGGAGCGGCC TTGCGTCGCGAAAGG TERM 344 357802 - 357745 - T 70 -11.9 -2.68823 | gap 1, opp_overlap 357745, overlap 357744 CGTTCGCGACACAAG GTCGTTCCCACCCGTACAGCGCTGAGCC TGA GGCTGAT-GCAGTACGTGTGGGAGCGGC CTTGCGTCGCGAAAG TERM 345 357833 - 357817 - T 88 -15.1 -3.53012 | CCTTGCGTCGCGAAA GGGCCGC GAA GCGGCCC CAAAGGCCTCACCCG Pput_0314 359020 - 357842 - | glycine betaine/L-proline ABC transporter, ATPase subunit Pput_0315 359862 - 359017 - | binding-protein-dependent transport systems inner membrane component TERM 346 359556 - 359582 + g 78 -12.2 -3.74626 | opp_overlap 359553 359556, overlap 359577 TCACCACACATACCA CCGTGGCGAAGG TGA CCTGCGCCAGGG TTTCCATGGTTTCCT TERM 347 359930 - 359894 - R 75 -10.1 -3.74077 | gap 1, overlap 359898 CTGCATAGATTGAAA TCAACC-CGGGGCAGG CACGGT CCTGCCCCGAGGTAGC GCTACTGCGTAGTTC TERM 348 359925 - 359898 - R 95 -16.3 -3.56268 | overlap 359894 ATAGATTGAAATCAA CCCGGGGCAGG CACGGT CCTGCCCCGAG GTAGCGCTACTGCGT Pput_0316 360894 - 359947 - | substrate-binding region of ABC-type glycine betaine transport system TERM 349 362223 - 362183 - g 100 -13.9 -4.78572 | opp_overlap 362221, overlap 362219 GGTCAATGAAGAAAA CGCCGCCGGCGGGCGCA TGGTGAC CGCGCCTACCAACGGCG CGGCAGGCATCATCC Pput_0317 361347 - 362723 + | L-serine dehydratase 1 TERM 350 363195 - 363179 - f 72 -5.8 -4.35992 | CATAACAAGAAATAA GTGCCC GCCTG AGGCAC ACCCTGCATTTGTGT Pput_0318 363225 - 364331 + | AraC family transcriptional regulator TERM 351 364359 - 364417 + T 100 -18.3 -3.61398 | gap 2, overlap 364359 CTCTTCGCGGGCACG -CCCGCTCCCACAGGTCA-CACCCGCTGA GCT TGAGCCAGTGGTGACCTGTGGGGGCGGGC TTGTTCCGCGAAGGG TERM 352 364359 - 364416 + T 100 -24.3 -2.76696 | gap 1, overlap 364359 CTCTTCGCGGGCACG CCCGCTCCCACAGGTCA-CACCCGCTGA GCT TGAGCCAGTGGTGACCTGTGGGGGCGGG CTTGTTCCGCGAAGG Pput_0319 364710 - 364453 - | hypothetical protein TERM 353 364935 - 364966 + H 86 -5.8 -5.06414 | gap 1, overlap 364938 GATGTTGCTCGCTCT TGGCCCCGG-TAGCT CAC GGCTTTCCGGGGTTA TTTTTATTCCGCCAG TERM 354 364938 - 364963 + H 79 -7.5 -4.63592 | gap 1, overlap 364935 GTTGCTCGCTCTTGG CCCCGG-TAGCT CAC GGCTTTCCGGGG TTATTTTTATTCCGC TERM 355 365456 - 365492 + G 86 -8.1 -4.6645 | GTGGAAAGCAGGCAG CTCAGGGTCGGAATCAG AAA TTGATTTTGATCCTAAG TTTTATATGTCTGTC TERM 356 365526 - 365536 + G 85 -3.2 -5.26875 | CGCCTTGGTAATCAG TTGG CAG CCAG TTTTTTGGTTGAGGG Pput_0320 365049 - 366746 + | Ricin B lectin TERM 357 366759 - 366781 + T 76 -13.5 -2.81547 | opp_overlap 366748, overlap 366756 366761 TAACCGAGGCCTAGC GAGCAGCCA TGGTC TGGCTGCTC TCGTTGGTATCAACC Pput_0321 367261 - 366791 - | hypothetical protein Pput_0322 368237 - 367272 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 358 367626 - 367682 + g 84 -15.3 -3.34013 | GCCGTCGTTGACCAG GTGCAAGGCTTCG-CGCCAGAGCGCTT CGAGC AGGCGGTC-GGCGATGAAGCCTGGCAC TTCCTTGCGCACATG Pput_0323 369292 - 368408 - | hypothetical protein TERM 359 368973 - 369015 + g 73 -11.3 -3.57144 | gap 2 AGCGGGCCGATCAGG TCGGTGCCCGGGCCGAACGCC AGC GGCGTTTCACCCGGGC-C-GA TTTCCAGGTCGCCGC Pput_0324 370360 - 369416 - | substrate-binding region of ABC-type glycine betaine transport system Pput_0325 370505 - 371452 + | AraC family transcriptional regulator Pput_0326 372073 - 371456 - | hypothetical protein TERM 360 372135 - 372110 - R 100 -19.1 -3.45849 | TGCAGATGACCAGAA CCGGGTACCAG AGAG CTGGTACCCGG TCTCGCTAATCAGAT TERM 361 372163 - 372174 + r 83 -7.2 -4.76193 | opp_overlap 372161, overlap 372161 GATAGCGAGAAACGC GGCG ATGT CGCC TTTTATCTTCTCATT Pput_0327 372837 - 372145 - | hypothetical protein Pput_0328 373392 - 372976 - | hypothetical protein Pput_0329 373678 - 374655 + | membrane dipeptidase Pput_0330 374732 - 375262 + | hypothetical protein Pput_0331 375278 - 377338 + | NADH:flavin oxidoreductase/NADH oxidase Pput_0332 377517 - 379469 + | hypothetical protein Pput_0333 379469 - 380701 + | electron transfer flavoprotein, alpha subunit-like protein TERM 362 381206 - 381217 + G 72 -7.2 -4.11216 | opp_overlap 381191 CGCGGCGCCCAAGCC GCGC CAGA GCGC TTTTGGGCCTGCGCG Pput_0334 380712 - 381482 + | electron transfer flavoprotein, alpha/beta-subunit-like protein TERM 363 381508 - 381535 + F 79 -14.1 -2.76263 | overlap 381505 CTAGAGGTCTCTTTT TGGGAGCGCCC CGGCAA GGGCGCTCCCC TCATTCAATACTCAG Pput_0335 382083 - 382910 + | hypothetical protein TERM 364 382935 - 382979 + T 82 -15.8 -2.80438 | gap 1, opp_overlap 382960, overlap 382933 TCAGTGGCTGTAGGT GGCTTGATGCGCTCCGACCTG AAAT CAG-TCGGAGCGCTGTAAGCC TAGTTGCGTATTTAC Pput_0336 384283 - 382991 - | Rieske (2Fe-2S) domain-containing protein Pput_0337 384579 - 385679 + | oxidoreductase FAD-binding subunit TERM 365 386299 - 386324 + G 71 -8.4 -3.92542 | gap 1, opp_overlap 386298, overlap 386302 TTGCTGTAAAAATGG GAAGCGCGACA GTTGA TGTCG-GCTTC TTCTTTGGCCGTAAG Pput_0338 385773 - 386495 + | hypothetical protein Pput_0339 388123 - 386498 - | methyl-accepting chemotaxis sensory transducer TERM 366 387563 - 387583 + g 77 -3.9 -4.90266 | overlap 387556 CACCAGGGCGAAAGC GCCGGCA TACTGGT TGGCGGC TTTTTCGTTGGTGGC TERM 367 387994 - 388023 + g 74 -9.3 -3.85698 | gap 1, overlap 387994 CGCTGACTTGCTCGA T-GGCAACGCCCGC CTG GCGGATGTTGCCCA TTTGTACCAGGGAGA TERM 368 388466 - 388449 - g 77 -4.1 -4.87665 | overlap 388450 CCTGATGCAGAAAAA CGCTCAA CTCA TCGAGCA GAACACCGCCCTTGG Pput_0340 388390 - 388620 + | hypothetical protein Pput_0341 388617 - 388919 + | hypothetical protein TERM 369 389275 - 389325 + G 83 -12.8 -3.82946 | opp_overlap 389278 GCATCCAGTTGCAAT TGATCACCAGCATGGGTGCT-GCC TTGCT GGCGAGCATCC-TGGTGGTGGTCA TTATCTTTACCGTGG Pput_0342 389241 - 391178 + | methyl-accepting chemotaxis sensory transducer TERM 370 391186 - 391202 + T 88 -15.1 -3.53012 | GGCTTTAGATTGCCG GGGCCGC CTT GCGGCCC TTTCGCGACACAAGG TERM 371 391275 - 391217 - T 86 -17 -2.68823 | gap 3, opp_overlap 391218, overlap 391216 391261 CTTTCGCGACACAAG GCCGCTCCCACAGAGGAT-TGCA-TCACC TGCA GGCGAATGCATAACCCCTGTGGGAGCGG- CCTTGTGTCGCGATA TERM 372 391218 - 391276 + T 73 -12.6 -2.69471 | gap 3, opp_overlap 391216 391217 391261 TTTCGCGACACAAGG -CCGCTCCCACAGAGGAT-TGCA-TCACC TGCA GGCGAATGCATAACCCCTGTGGGAGCGGC CTTGTGTCGCGATAG Pput_0343 392357 - 391317 - | threonine aldolase TERM 373 392106 - 392061 - G 80 -4.6 -4.82901 | gap 2, opp_overlap 392063 TCCGTTGGAGAAAAA CTCCGGCGCACCGCATTCGTCG GTTT CGACGTGGGCGGT-CTC-GGAG CAGATCACGCTGTGA TERM 374 393761 - 393722 - g 79 -11.4 -3.95324 | CACCGTCAACAAGAA CGCCGTGCCGAACGAC CCGCAGTC GCCGTTCGTCACGTCG GGCCTGCGTATCGGC Pput_0344 392682 - 393935 + | serine hydroxymethyltransferase Pput_0345 393951 - 395201 + | sarcosine oxidase beta subunit family protein Pput_0346 395216 - 395551 + | sarcosine oxidase delta subunit family protein TERM 375 397091 - 397040 - g 83 -7.2 -4.57569 | gap 1, opp_overlap 397059 397059, overlap 397041 GCACCCTGCCAAAAA CCGTGGCGCGCAAGGAAGAG-GCCA CCG TGGCACTGTTCCTGGTGCCGCACGA CAAAGGCACCAAGGG Pput_0347 395548 - 398562 + | sarcosine oxidase alpha subunit family protein TERM 376 398775 - 398762 - g 71 -5.9 -4.25104 | CGTCTTCCAGCAAAA CCCCG GCGC CGAGG CCAAAGCCCAGTCGC Pput_0348 398733 - 399365 + | sarcosine oxidase gamma subunit family protein Pput_0349 399377 - 400234 + | formyltetrahydrofolate deformylase TERM 377 400320 - 400264 - f 90 -15.8 -3.53012 | gap 1, opp_overlap 400264 CTCTTCGCGGCTAAA GCCGCGCCTACTGGTACTGCA-CAGCC CTCG GGTTGGTGCGGTCCCCGTAGGAGCGGC TTTAGCCGCGAAGAG TERM 378 400264 - 400320 + F 100 -20.2 -3.53012 | gap 1, opp_overlap 400264 CTCTTCGCGGCTAAA GCCGCGCCTACTGGTACTGCA-CAGCC CTCG GGTTGGTGCGGTCCCCGTAGGAGCGGC TTTAGCCGCGAAGAG Pput_0350 400536 - 401735 + | formaldehyde dehydrogenase, glutathione-independent TERM 379 401753 - 401775 + T 81 -9.1 -4.47873 | opp_overlap 401755, overlap 401755 ACTGACGCTTAACAA AAGCCCCTC GAACA GAGGGGCTC TTTTATGGCTGTTCT TERM 380 401755 - 401773 + T 80 -11.7 -3.83791 | opp_overlap 401755, overlap 401753 TGACGCTTAACAAAA GCCCCTC GAACA GAGGGGC TCTTTTATGGCTGTT TERM 381 401773 - 401755 - T 95 -11.7 -4.64676 | opp_overlap 401755 401753 TGACGCTTAACAAAA GCCCCTC GAACA GAGGGGC TCTTTTATGGCTGTT Pput_0351 402682 - 401894 - | hypothetical protein TERM 382 402580 - 402616 + g 78 -6.5 -4.56597 | opp_overlap 402572 AGTAAAGCCCCGTCA GCGCGTCAGGGAACTCA CCA TTAAATCCTTGACGTGC TTTTTCCGACGGCAA Pput_0352 402883 - 403458 + | hypothetical protein TERM 383 403601 - 403584 - T 91 -12.7 -4.1399 | opp_overlap 403584 TCACCTACACAGAAA GCCCCTC CTCA GAGGGGC TTTTTGTATCAATGG TERM 384 403584 - 403601 + T 100 -12.7 -4.99035 | opp_overlap 403584 TCACCTACACAGAAA GCCCCTC CTCA GAGGGGC TTTTTGTATCAATGG Pput_0353 404732 - 403746 - | hypothetical protein TERM 385 405002 - 405032 + H 77 -3.3 -5.08824 | overlap 405030 TTCTGGGTGTTTTGC CGTAAGGCATTAA AGCCG TTGACGTCTTGCG TTTTTTCACTAGAGC Pput_0354 405491 - 406081 + | hypothetical protein Pput_0355 407054 - 406167 - | phospholipid/glycerol acyltransferase Pput_0356 407236 - 407736 + | hypothetical protein Pput_0357 407884 - 408564 + | DNA-binding response regulator CreB TERM 386 409439 - 409420 - g 72 -13.6 -2.79183 | opp_overlap 409418 409417 TGCAGGGCGAGGATA TGCCCGCT GATC AGCGGGCA CGCTTTGCCGGCAAT Pput_0358 408564 - 410000 + | sensory histidine kinase CreC TERM 387 410088 - 410072 - f 78 -13.7 -3.06312 | overlap 410060 AAAGCCTCCATGCAA GGCGCAG ACA CTGCGCC CACTGCCACAGGAGG TERM 388 410637 - 410618 - g 81 -6.4 -4.77438 | ATGGACGATCAAAAA GTGCCG TTCGAGCC CGGCAC CCAGCTCGACTGGAT Pput_0359 410108 - 411436 + | hypothetical protein Pput_0360 412224 - 411601 - | glutathione S-transferase domain-containing protein TERM 389 411690 - 411671 - G 74 -15 -2.52676 | overlap 411658 CACGCCGCCAACCCA GGCTGGCG CTCA CGCCAGCC AAACCCGGGCTGACG Pput_0361 412950 - 412228 - | methionine sulfoxide reductase A Pput_0362 415845 - 413065 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 390 416039 - 416063 + r 73 -5.5 -4.56597 | opp_overlap 416043, overlap 416041 GCGGCCTTGTGTCGC GAAAGGAGGGC GAA GCCCTCCCAGC TTTTTCCAGGCAAAA TERM 391 416059 - 416043 - R 82 -13.7 -3.53012 | opp_overlap 416041 416039 CCTTGTGTCGCGAAA GGAGGGC GAA GCCCTCC CAGCTTTTTCCAGGC TERM 392 416102 - 416083 - R 100 -7 -5.81412 | overlap 416084 TCCAGGCAAAAAAAA GCCCCGCC AATC GACGGGGT TGAGGTACGAGCGTG TERM 393 416101 - 416084 - R 81 -10.5 -4.07763 | overlap 416083 CCAGGCAAAAAAAAG CCCCGCC AATC GACGGGG TTGAGGTACGAGCGT TERM 394 416162 - 416130 - R 71 -7.6 -4.11216 | opp_overlap 416135 GTGGCAGCTCGAAAA GGGTACTGCCCCTC GCAAG GAGGGGCAGTGTGC TGGCTTACAGCAGCA TERM 395 416135 - 416157 + r 81 -14.9 -2.82933 | opp_overlap 416130 AGCTCGAAAAGGGTA CTGCCCCTC GCAAG GAGGGGCAG TGTGCTGGCTTACAG Pput_0363 417798 - 416167 - | dihydrolipoamide acetyltransferase aceE 420457 - 417812 - | pyruvate dehydrogenase subunit E1 TERM 396 420567 - 420581 + H 71 -7.2 -4.08919 | TGTCTTCCGGCGCGT TGTAGT TTT ACTACA TTTGCTTTCGCATTT TERM 397 422544 - 422558 + G 71 -9.2 -3.74251 | GCTGACCGAAAACCC CGGTGC CTT GCGCCG TTTGCTGACGCTGTG Pput_0365 420841 - 423774 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 398 423783 - 423799 + F 95 -15.1 -3.72576 | GACTTGAGATCGTTG GGGCCGC TGT GCGGCCC TTTCGTCACACAAGG TERM 399 423813 - 423863 + F 75 -11.7 -3.49475 | gap 1, opp_overlap 423813 CCTTTCGTCACACAA GGCCGCTCCCACCATTGG-CCGGC GTAT GCAGTACCTTTTGTGGGAGCGGCC TTGTGTCGCGATGGG TERM 400 423863 - 423813 - f 82 -13.9 -3.48276 | gap 1, opp_overlap 423813 CCTTTCGTCACACAA GGCCGCTCCCACCATTGGC-CGGC GTAT GCAGTACCTTTTGTGGGAGCGGCC TTGTGTCGCGATGGG TERM 401 423989 - 423953 - f 74 -10.9 -3.6944 | gap 2, overlap 423951 GCCTGAATATAAAGA GGGGAGGC--CAGGCTG TACCG CGGCCTGTAGCCTCCCC GAGCGTTTCTGGACT Pput_0366 424009 - 425058 + | lipopolysaccharide heptosyltransferase II Pput_0367 425059 - 426117 + | lipopolysaccharide heptosyltransferase I Pput_0368 426117 - 427241 + | glycosyl transferase, group 1 Pput_0369 427238 - 428044 + | lipopolysaccharide kinase Pput_0370 428044 - 428778 + | lipopolysaccharide kinase Pput_0371 428775 - 429527 + | lipopolysaccharide kinase Pput_0372 429527 - 430969 + | hypothetical protein TERM 402 430972 - 431001 + T 74 -12.9 -2.81547 | gap 1, overlap 430972 ACTGGTCGACTGAGG CCGCCGGATCCGCT GTC AGTGGGTC-GGCGG TGGTTGATCTGGCAG Pput_0373 433773 - 430987 - | hypothetical protein TERM 403 433409 - 433448 + g 73 -8.5 -4.07568 | gap 1 TAGCTTCGCCAGTTG GGCCGTAGGCCTTCCAGC AGAAC GC-GGTAGACCTGTGGCC TTTTGGCCAGGGGCA Pput_0374 434026 - 433841 - | hypothetical protein Pput_0375 435135 - 434023 - | PepSY-associated TM helix domain-containing protein TERM 404 434768 - 434756 - G 74 -10.5 -3.80841 | ATCACCATCATGAAA CCGCC GTT GGCGG CCGGCATGGCCACCG TERM 405 435163 - 435187 + r 75 -12.7 -3.15758 | overlap 435152 TGTTGTCGGTTGGAA CCCGGGGCCGC AAG GCGGCCCCAGC TTACTCAGAACTTGT Pput_0376 437624 - 435192 - | TonB-dependent siderophore receptor TERM 406 435687 - 435705 + g 80 -5.2 -4.87665 | opp_overlap 435682, overlap 435656 435653 GGTCACACCACCGAC CGTGTTGG TGA CCGAGACG TTTTTCTGAGTCAGG Pput_0377 438834 - 437878 - | anti-FecI sigma factor, FecR Pput_0378 439349 - 438831 - | RNA polymerase sigma factor Pput_0379 440263 - 439553 - | DNA polymerase III, epsilon subunit TERM 407 439631 - 439666 + g 74 -12.5 -3.33162 | CGGGCTGTCCAGCTG CTGGCGCCGGGCCTG GCTGAA CAGGATCAGCGCCAG TTCTGCAGTCACCTG Pput_0380 442197 - 440260 - | CBS domain-containing protein TERM 408 440570 - 440608 + g 76 -13.1 -3.51825 | gap 1, opp_overlap 440569 440570 GCACCATCCACGAAG GGCGTCAGGCCCTGGACC TTGA GGTCGAGGGTC-GCCGCC TTGTCGTTGCCCTGG TERM 409 442165 - 442186 + g 72 -2.1 -4.77036 | overlap 442168 CAGTACCGCTGTCTT GCCCGCCTG GCTG TAGGCGTCC TTTTTGCTCATGAAA Pput_0381 442314 - 442859 + | response regulator receiver protein TERM 410 442856 - 442898 + T 74 -11.1 -3.33815 | opp_overlap 442854 442880, overlap 442858 442859 AGAACTGAAAATGGG TTGATGCGCCAGGGGGCCG CAAAA CGGCACCCTGGCGCAGATG TTACTTACAACCCGT TERM 411 442858 - 442896 + T 87 -15.9 -3.23853 | opp_overlap 442854 442880, overlap 442856 442859 AACTGAAAATGGGTT GATGCGCCAGGGGGCCG CAAAA CGGCACCCTGGCGCAGA TGTTACTTACAACCC TERM 412 442859 - 442895 + T 95 -19.4 -2.54098 | opp_overlap 442854 442880, overlap 442858 442856 ACTGAAAATGGGTTG ATGCGCCAGGGGGCCG CAAAA CGGCACCCTGGCGCAG ATGTTACTTACAACC Pput_0382 445080 - 442903 - | malate synthase G TERM 413 443589 - 443602 + g 73 -6.7 -4.25256 | overlap 443595 GGCCGGTGGCCAGGC CAACG TCGA CGTTG TTGTTTTCGTAGGCG Pput_0383 445530 - 446048 + | amino acid-binding ACT domain-containing protein TERM 414 446089 - 446142 + T 75 -12.5 -3.01712 | opp_overlap 446092, overlap 446092 GGCCCTATCGCGACA CAAGGCCGCTCCCACA-CGGTCCTG CGTACA CCGGACAAATGTGGG-GCGGCCTTG TGTTGCGAAGCGGCC TERM 415 446139 - 446092 - T 75 -11.3 -3.49475 | opp_overlap 446089 446092 CCTATCGCGACACAA GGCCGCTCCCACA-CGGTCCTGC GTAC ACCGGACAAATGTGGG-GCGGCC TTGTGTTGCGAAGCG TERM 416 446326 - 446360 + T 71 -8.5 -3.94664 | overlap 446328 446357 TAACCTATGGAGATG TCTCTGCAGGCCAGG CGCTA CATGGCCTGCAGATC TTTGATCGTTTTCTG TERM 417 446328 - 446358 + T 91 -15.5 -3.54516 | overlap 446326 446357 ACCTATGGAGATGTC TCTGCAGGCCAGG CGCTA CATGGCCTGCAGA TCTTTGATCGTTTTC Pput_0384 447264 - 446377 - | transporter DMT superfamily protein TERM 418 447238 - 447250 + g 70 -10.5 -3.55761 | CAAGCCCAGTATGTA CCCGC GAC GCGGG TTTGCGGCGTGCATG Pput_0385 448303 - 447329 - | serine/threonine protein kinase Pput_0386 449226 - 448462 - | ModE family transcriptional regulator Pput_0387 450007 - 449276 - | amidophosphoribosyltransferase-like protein Pput_0388 450097 - 451155 + | biotin synthase TERM 419 451262 - 451279 + G 74 -12.7 -3.29511 | opp_overlap 451233, overlap 451252 451251 GAAGTCGTGGTCGAC GGCCAGC GGTT GCTGGCC TTCTGCAGCAATGAC Pput_0389 451157 - 452329 + | 8-amino-7-oxononanoate synthase Pput_0390 452322 - 453053 + | carboxylesterase Pput_0391 453034 - 453864 + | biotin biosynthesis protein BioC bioD 453875 - 454555 + | dithiobiotin synthetase Pput_0393 454767 - 455063 + | hypothetical protein TERM 420 455125 - 455159 + F 70 -11.5 -3.01712 | GCTTGCCCGCGAATG CGTCCGATCAGACAA CAATT TTGTCTGGTCGGGCC TCTTCGCGGGCAAGC Pput_0394 455352 - 457157 + | acyl-CoA dehydrogenase domain-containing protein TERM 421 457178 - 457203 + F 100 -12.6 -5.1615 | gap 1, opp_overlap 457178 GCGCTGTACCCAAAA CCCGCCTGCCC TGACC GGG-AGGCGGG TTTTTTACGTCTTCA TERM 422 457203 - 457178 - f 91 -12.6 -4.18018 | gap 1, opp_overlap 457178 GCGCTGTACCCAAAA CCCGCCTGCCC TGACC GGG-AGGCGGG TTTTTTACGTCTTCA TERM 423 457716 - 457744 + G 72 -7.4 -4.12456 | gap 1, overlap 457719 457740 CTTCTACCGTGATCA TGGCCGCGTGCGT GAGG ACGC-CGCGGTGA TTTTCCACCTGGTCT TERM 424 458337 - 458355 + G 70 -12.4 -3.14211 | CGGTGACCAGGTGCT GCGGTTGG TCG CCAGCCGC TTGGTCACCGGCGGT TERM 425 458566 - 458508 - g 79 -13.8 -3.44051 | gap 3, overlap 458525 GCGCGATCAGCACAA CCGC-CCGCAGGACGATA-CCGCCGGGCG CCAG CGCCGGGCGGGCAGCG-CCGGCGGCACGG TCTCGGTCACCATCA TERM 426 458548 - 458525 - g 78 -15.2 -2.82516 | overlap 458508 GCCCGCAGGACGATA CCGCCGGGCG CCAG CGCCGGGCGG GCAGCGCCGGCGGCA Pput_0395 457459 - 458736 + | diguanylate cyclase TERM 427 459724 - 459713 - g 72 -7.2 -4.1822 | opp_overlap 459712 GGTGAGCCGAACAAA GGCC TGGC GGCC ATGTTCACCATGATG Pput_0396 458861 - 460639 + | acyl-CoA dehydrogenase domain-containing protein TERM 428 460963 - 460988 + T 100 -17.7 -4.09542 | opp_overlap 460968, overlap 460968 CAGGGAAACAGTCTG GAAAACCCCGC TTCG GCGGGGTTTTC TTTATGTGCGTGTTT TERM 429 460983 - 460968 - T 87 -11.8 -4.11773 | opp_overlap 460963 460968 AAACAGTCTGGAAAA CCCCGC TTCG GCGGGG TTTTCTTTATGTGCG TERM 430 460968 - 460983 + T 100 -11.8 -5.05113 | opp_overlap 460968, overlap 460963 AAACAGTCTGGAAAA CCCCGC TTCG GCGGGG TTTTCTTTATGTGCG Pput_0397 461926 - 461003 - | LysR family transcriptional regulator Pput_0398 462138 - 463418 + | aminotransferase class-III TERM 431 463464 - 463495 + F 100 -11.5 -6.13 | GGCGTTCCTGCGCAT CGCCCCTGGCC TGTTTCATTC GGCCCGGGGCG TTTTTTTTTGCCTGT Pput_0399 463566 - 463724 + | hypothetical protein Pput_0400 465611 - 463788 - | peptidase S9 prolyl oligopeptidase TERM 432 464492 - 464456 - GT 71 -11.4 -3.13403 | overlap 464454 CGCCGTGGATGAACA CCACCAGCGGTGCGGC GCCTT GCGGCTGCGCTGGCGG GTAGAAGAAACCATG Pput_0401 466707 - 465577 - | pyrroloquinoline quinone biosynthesis protein PqqE TERM 433 466359 - 466387 + gr 76 -5.9 -4.62069 | overlap 466360 CGTCGCTGGCCTGGA AGCTGATCTGGAT ATG GTCCAGGCCAGCC TTTTTGAAGTCGGCG Pput_0402 466984 - 466709 - | pyrroloquinoline quinone biosynthesis protein PqqD Pput_0403 467736 - 466981 - | pyrroloquinoline quinone biosynthesis protein PqqC Pput_0404 468810 - 467899 - | pyrroloquinoline quinone biosynthesis protein PqqB TERM 434 468870 - 468851 - R 100 -12.8 -4.77757 | TCTGAAAAACGAAAA CGCCCCGG CAGG CCGAGGCG TGAAACCCTAAGCCC Pput_0405 471549 - 469120 - | coenzyme PQQ biosynthesis protein PqqF TERM 435 469573 - 469587 + g 73 -7 -4.25104 | opp_overlap 469572, overlap 469575 CAATTGGGCTAACAG GCGGCC TGC GGCCTC TTTTGCTGCCGGCAA Pput_0406 472355 - 471561 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_0407 474052 - 472370 - | amine oxidase Pput_0408 474826 - 474365 - | AsnC family transcriptional regulator TERM 436 474435 - 474406 - G 72 -13.6 -2.82623 | overlap 474403 TGCTGCTGAGAATGA TCGACGTGGTGG TTTTCT CCACCCCGTCGA CACTGCCAATCTGGT Pput_0409 475014 - 475568 + | hypothetical protein TERM 437 475838 - 475866 + T 77 -7.5 -4.40804 | overlap 475824 475841 AGGCTTGCTGATTTG TGAGCCGATTA GCGAGCA TATTCGGCTCA TTTTGTGAGCTGATA Pput_0410 476193 - 475912 - | hypothetical protein TERM 438 476105 - 476121 + g 84 -15.1 -3.34043 | opp_overlap 476105 TGCGGGCATGAAAAA GCCGCGC AGT GCGCGGC TTCTAAGCTGGTGGG TERM 439 476121 - 476105 - G 100 -15.1 -4.72272 | opp_overlap 476105 TGCGGGCATGAAAAA GCCGCGC AGT GCGCGGC TTCTAAGCTGGTGGG TERM 440 476929 - 476915 - g 82 -2.8 -5.22039 | overlap 476917 CGGAAAGCTAAAAAA GAGCTT AAT AAGCTG AACGCTATTTATGGG Pput_0411 476510 - 477103 + | hypothetical protein Pput_0412 477112 - 477678 + | hypothetical protein TERM 441 478499 - 478516 + G 75 -3.5 -4.89477 | overlap 478501 GTTCCACGCATTGAT TTTTGTA CAGC TACAAGA TTTTATTATTACCGA Pput_0413 477665 - 478732 + | hypothetical protein Pput_0414 479329 - 478721 - | hypothetical protein TERM 442 478899 - 478909 + g 77 -4 -4.82518 | ATGGACTCGCAAGTT TCAA GTT TTGA TTTTCTTACTATTTT Pput_0415 480273 - 479578 - | integrase catalytic subunit TERM 443 479622 - 479655 + g 71 -6 -4.3208 | gap 1, opp_overlap 479631, overlap 479622 479623 GTTTCTCATATTCTA C-TGGACACAGCTGC ATAGC GCTGCTGTGTCGACG TTTTGGGTTATAGAA TERM 444 481050 - 481033 - R 78 -6.2 -4.84359 | GCATGCGTACAAAAA GGCCAC AGTGGA GCGGCC AGATATTCCGAATAT Pput_0419 481834 - 481598 - | transposase IS3/IS911 family protein TERM 445 482030 - 482014 - R 95 -13.7 -4.39571 | opp_overlap 482008 CCCAGAAAGCCAAAA GCCGCGT AAT ACGCGGC TTCAAGGTTGGTGGG Pput_0420 485875 - 482132 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 446 482866 - 482892 + g 81 -11.6 -3.95986 | TCTGGGTCTTCAGGC TGAGCTTGGGCT GGA AGCACAGGCTCA TTTCGTTGCGTTCGA TERM 447 484736 - 484684 - G 75 -12 -3.64703 | opp_overlap 484698, overlap 484685 TGTTGCGTATCCAAA GGGGC-TGACCGTCAGCCCGGATCAC CCG GTAGTCCAGGCTGT-GGTCGCGCCCC GCTGCGGTCTCGCTG TERM 448 485550 - 485535 - G 70 -10.4 -3.6502 | overlap 485544 TACGGGCGAGTGAAA GCCAGG AAGC CCTGGC GTTCGGGGGTGGACA TERM 449 486001 - 485971 - R 95 -14.9 -3.72576 | gap 1, opp_overlap 485977, overlap 485977 TCTCGGGCCACTAAA GA-AAAACCCCGGC CTGG GCCGGGGTTTTGTC ATCACTCGTCGAGGA TERM 450 485977 - 485994 + r 100 -14.1 -4.4767 | opp_overlap 485971 485977 GCCACTAAAGAAAAA CCCCGGC CTGG GCCGGGG TTTTGTCATCACTCG TERM 451 485994 - 485977 - R 100 -14.1 -5.33405 | opp_overlap 485977, overlap 485971 GCCACTAAAGAAAAA CCCCGGC CTGG GCCGGGG TTTTGTCATCACTCG Pput_0421 487853 - 486003 - | RNA polymerase sigma factor RpoD TERM 452 487120 - 487131 + g 81 -4.4 -5.06414 | TCGATGCTTTCCTTG TGGT TACG ACCA TTTTTCTTCAGGACC dnaG 489903 - 487921 - | DNA primase TERM 453 489708 - 489688 - G 71 -8.9 -3.96148 | opp_overlap 489687 GTGGTCCATGACAAA GCCCAAGGC GTT GCCTCCGGC GCCACAGCCGAAGCA TERM 454 490211 - 490246 + r 75 -9 -4.1822 | gap 1, opp_overlap 490218 490222, overlap 490187 TGAACGTCTGTATTA GTACAG-ACGAACGGCG CGG CGCTGTTCGCGCTGAAC TTTCTTGGCGTGACG TERM 455 490238 - 490218 - R 70 -11.1 -2.96216 | opp_overlap 490187 490211, overlap 490222 CTGTATTAGTACAGA CGAACGGCG CGG CGCTGTTCG CGCTGAACTTTCTTG rpsU 490423 - 490208 - | 30S ribosomal protein S21 TERM 456 490335 - 490348 + g 72 -3.7 -4.56597 | CGGCTACGAACTTCA GCCAG TACA CCGGC TTTTTCGCAGGAGCG TERM 457 491179 - 491209 + G 74 -13.2 -3.36273 | CGGTCCGGAAATTGC GCGTCTGGCCGAAC AAG GTGTGGCCGGGCGC TTCGTCTTCCCGCGG Pput_0424 490628 - 491653 + | metalloendopeptidase glycoprotease family Pput_0425 492240 - 491671 - | putative glycerol-3-phosphate acyltransferase PlsY Pput_0426 492315 - 492671 + | dihydroneopterin aldolase Pput_0427 492662 - 493171 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase cca 494499 - 493393 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 458 494001 - 494033 + g 71 -9.1 -3.72576 | overlap 493997 GTGCCTGCAGTTCGC CCGAGGCGCTGAT CTGACGC ATCAGCGCCAAGG TTTCATCGGCAACCC TERM 459 494092 - 494080 - G 71 -9.1 -3.74747 | overlap 494090 GTAACGGGCAGCAAA GCGTG CAA CACGC AGCACACGCAAAGGA TERM 460 494508 - 494549 + r 89 -17.3 -3.05816 | opp_overlap 494516 TGTGCATGTGCAGCT CTCCATAACTGCCGACAGG ATAA CCCGTCGGCGGTCATGGGG TTGCATCAGAGGTGG TERM 461 494541 - 494516 - R 78 -12.5 -3.29511 | opp_overlap 494508 TGCAGCTCTCCATAA CTGCCGACAGG ATAA CCCGTCGGCGG TCATGGGGTTGCATC Pput_0429 496123 - 494555 - | hypothetical protein TERM 462 495776 - 495800 + g 81 -6.5 -4.67982 | gap 1, opp_overlap 495778 GCACGCGTGCGCAAT CACCA-GTGC CTGCAT GCACATGGTG TTTTCTTCCATCAGG Pput_0430 497391 - 496120 - | hypothetical protein TERM 463 496197 - 496231 + g 73 -12.9 -3.13403 | opp_overlap 496214, overlap 496195 CCAACTGCTGCTGGG CGAACGTGTCGGGGA AAGCA TCTCCGATACGCTCG TATTCATACCACAGC Pput_0431 499469 - 497547 - | putative serine protein kinase, PrkA TERM 464 497708 - 497719 + g 73 -3 -4.79352 | GCAGCAGGTCTTCGG TGTT GGAG AACA TTTTCTTCTCGATCA TERM 465 498803 - 498828 + g 83 -9 -4.25283 | overlap 498791 GGATATCGACCTTGC CGACCAGGGC CGAGAT GTCCTGGTTG TTTTCATCGCCGGGT TERM 466 499738 - 499707 - R 72 -10.8 -3.48276 | gap 1, overlap 499708 CCGTTCGTCAGATAA GCCGCAAGCCCGCGC GGG GCACGGGCT-GCAGG GGAAAATAAAAAATT TERM 467 499737 - 499708 - R 78 -14.3 -2.68823 | gap 1, overlap 499707 CGTTCGTCAGATAAG CCGCAAGCCCGCGC GGG GCACGGGCT-GCAG GGGAAAATAAAAAAT glpE 500084 - 499752 - | thiosulfate sulfurtransferase apaH 500965 - 500099 - | diadenosine tetraphosphatase TERM 468 500440 - 500465 + g 76 -11.1 -3.73534 | gap 1, opp_overlap 500412, overlap 500440 AGTAGTTGGTGATGA CC-CGCAGGCGT TCG ACGCCGGCGAGG TTCTTGCTCCACTTG apaG 501345 - 500965 - | ApaG ksgA 502346 - 501543 - | dimethyladenosine transferase TERM 469 502195 - 502222 + g 77 -12.7 -3.54307 | CTGCCCAGCAGGCCT TCGGTCAGGGC GCCTTG GCCCGGACCGA TTTCCAGCAGGTGTT pdxA 503332 - 502343 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 470 503336 - 503359 + r 72 -10.2 -3.52204 | overlap 503332 CAGGGGCTTCACTGG GCGGCCTGGT CAGC GCCAGGCAGC TTGATTTCAACGTAG Pput_0437 504648 - 503329 - | SurA domain-containing protein Pput_0438 507436 - 504629 - | organic solvent tolerance protein TERM 471 507827 - 507860 + G 93 -7.3 -5.1963 | gap 1 CGCTGACGTCCATGT GCCGCTGATCCACGCC CAG GACCTGGAAC-GCGGC TTTTTGTTGCTTGGG Pput_0439 507567 - 508586 + | aminoglycoside phosphotransferase Pput_0440 508583 - 509254 + | nucleotidyl transferase Pput_0441 509256 - 510023 + | heat shock protein DnaJ domain-containing protein Pput_0442 511049 - 510051 - | hypothetical protein TERM 472 510081 - 510110 + g 100 -12.2 -4.49958 | overlap 510082 CATCCACCCCCGCAC CCGGCGGAACAA TTGCTC TTGTTCCGCCGC TTTGTTTGCTGGCAT TERM 473 510082 - 510109 + g 84 -15.7 -3.29252 | overlap 510081 ATCCACCCCCGCACC CGGCGGAACAA TTGCTC TTGTTCCGCCG CTTTGTTTGCTGGCA TERM 474 511101 - 511123 + H 79 -12 -3.55444 | opp_overlap 511092 ATAGTATTTGCCCGT GACGGCCATG CTG CATGACCGTC TTTGCCAAGTCGAGC Pput_0443 511145 - 513532 + | PAS/PAC sensor signal transduction histidine kinase TERM 475 513987 - 514001 + G 71 -5.6 -4.28254 | opp_overlap 513984 CCGTTGCACACACTG CTCTCG GAG CGCGAG TTTTCAGTGTTCGAG Pput_0444 513543 - 514172 + | two component LuxR family transcriptional regulator Pput_0445 514468 - 515592 + | spermidine/putrescine ABC transporter ATPase subunit Pput_0446 515633 - 516667 + | extracellular solute-binding protein TERM 476 516829 - 516844 + G 73 -6.8 -4.36554 | gap 1, overlap 516830 GGCGCAGGCGTTGAT C-GCGCC GCT GGCGCTG TTTCTTCTGCTGGTG TERM 477 516830 - 516842 + G 74 -10.5 -3.78004 | overlap 516829 GCGCAGGCGTTGATC GCGCC GCT GGCGC TGTTTCTTCTGCTGG Pput_0447 516728 - 517975 + | binding-protein-dependent transport systems inner membrane component Pput_0448 517986 - 518813 + | binding-protein-dependent transport systems inner membrane component TERM 478 519102 - 519116 + G 70 -10 -3.55071 | overlap 519097 ATGTCCCCAACCTGA CCATCG GTC CGATGG TTTGCACCGCTCTGC Pput_0449 518963 - 519637 + | ribulose-phosphate 3-epimerase Pput_0450 519634 - 520452 + | phosphoglycolate phosphatase TERM 479 520931 - 520920 - g 81 -7.2 -4.42386 | overlap 520921 520922 TCGTTATGTAGAAAA GCGC CTGG GCGC CAGCCCCAACCCGGA Pput_0451 520522 - 522003 + | anthranilate synthase component I TERM 480 522072 - 522042 - T 78 -12 -3.53444 | gap 1, overlap 522045 CCATTCGCGGGTAAA CCACGCTCCTACA AGGTTG TGTAGGAGCG-GG TTCACCCGCGAAAGG TERM 481 522070 - 522045 - T 77 -13.4 -2.90496 | overlap 522042 TTCGCGGGTAAACCA CGCTCCTACA AGGTTG TGTAGGAGCG GGTTCACCCGCGAAA TERM 482 522220 - 522207 - T 79 -9.5 -4.07885 | TAGGCCGTCGTAAAA GCGGG TTCA CCCGC GAATGGGCCGCAAAG Pput_0452 524139 - 522250 - | outer membrane autotransporter TERM 483 522721 - 522741 + g 72 -4.5 -4.66609 | CCCGGACATTGCCCA GGCCTCGCC GTC GGTGTCGCC TTTTTCACTGCGGTC TERM 484 523604 - 523640 + g 78 -14.3 -3.01791 | GCTTGGGCGCTGGCA GCCAGGCGGGCGCCG GCGGCTA CGGCGTCGGCCGGGC TATTCACCAGGCCCT Pput_0453 524507 - 525100 + | anthranilate synthase component II TERM 485 525282 - 525261 - g 76 -10.1 -3.94846 | GCATGAAAAGCGAAA GCATCGACG AAAT CGTCGGTGC GGTGTCGGTGATGCG trpD 525110 - 526159 + | anthranilate phosphoribosyltransferase trpC 526156 - 526989 + | indole-3-glycerol-phosphate synthase TERM 486 526999 - 527016 + F 100 -10.5 -5.29782 | opp_overlap 526995 526999 GACTGATCAAATGAA GCCGGCG TTTT TGCCGGC TTTTTTGTACCTGTA TERM 487 527016 - 526999 - f 72 -9.8 -3.57418 | opp_overlap 526999, overlap 526995 GACTGATCAAATGAA GCCGGC GTTTTT GCCGGC TTTTTTGTACCTGTA TERM 488 527052 - 527091 + F 93 -16.5 -3.53012 | gap 1, overlap 527050 CGCGTCGCGGGCAAG CCCGCCCCTAC-ACGGGG ACGCG CCCTGTTGTAGGCGCGGG TTTACCGCGAAGAGG Pput_0456 527136 - 527840 + | hypothetical protein Pput_0457 528508 - 527837 - | cAMP-regulatory protein TERM 489 528526 - 528548 + H 75 -11.3 -3.53761 | opp_overlap 528539, overlap 528528 GCTTTTTATAGAGGC TGGCTGGCG GAAAG CGCCAGTCA TTTGGCGCCAGCTTA Pput_0458 528673 - 529095 + | OsmC family protein Pput_0459 530212 - 529172 - | hypothetical protein TERM 490 529228 - 529253 + g 71 -5.9 -4.25104 | GAAGACTGCTTCTTA GCGCCTGGCTC AACC GCTCCCGGCGC TTTTGGTAAACCAGG Pput_0460 530870 - 530223 - | ubiquinone biosynthesis protein COQ7-like protein Pput_0461 531274 - 530936 - | histidine triad (HIT) protein Pput_0462 532120 - 531338 - | short-chain dehydrogenase/reductase SDR TERM 491 531544 - 531521 - G 74 -13.8 -2.87132 | CTCGGGGCTGAGACA GCGCGGCTTG CCAT CGAGCCGCGC AATGCGCCGGCGTGC Pput_0463 533144 - 532188 - | 2-nitropropane dioxygenase, NPD TERM 492 532692 - 532745 + g 76 -5.6 -4.59773 | overlap 532733 CCAGGTGCCGGCATG GCCGCCTGCGCCTGCGGCGACGGC GATAAG GCCATCGACACCCGCTTCGGCGGC TTTTTCGGCATGCCG Pput_0464 533598 - 533173 - | hypothetical protein TERM 493 534283 - 534319 + G 74 -13 -3.28712 | gap 1 CTGCAAGTCGGGTGT CAGCGGTGCTGGCCGTG GCGC CGCGGTCGGC-TCGCTG TTCTGCGAAGCCGGC argC 533741 - 534775 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 494 534813 - 534795 - f 91 -13.1 -4.15833 | opp_overlap 534795 ACCAGCAGTGGAAAA GGCCCGC GTCGT GCGGGCC TTTTTGCAGGTCGCG TERM 495 534795 - 534813 + F 95 -13.8 -4.59773 | opp_overlap 534795 ACCAGCAGTGGAAAA GGCCCGCG TCG TGCGGGCC TTTTTGCAGGTCGCG Pput_0466 534875 - 535273 + | iron-sulfur cluster insertion protein ErpA TERM 496 535287 - 535316 + T 87 -16.5 -2.93393 | opp_overlap 535292, overlap 535292 AAGGGCTGGGCATAC GAAAACGCCGCGC AATT GCGCGGCGTTTTG CTTTCTGGCGTAGCG TERM 497 535311 - 535292 - T 100 -16.4 -4.34402 | opp_overlap 535287 535292 CTGGGCATACGAAAA CGCCGCGC AATT GCGCGGCG TTTTGCTTTCTGGCG TERM 498 535292 - 535311 + T 100 -16.4 -4.61873 | opp_overlap 535292, overlap 535287 CTGGGCATACGAAAA CGCCGCGC AATT GCGCGGCG TTTTGCTTTCTGGCG anmK 536424 - 535333 - | anhydro-N-acetylmuramic acid kinase TERM 499 536332 - 536355 + g 85 -14.6 -3.67597 | GGGCAGGTAGTGGGT GGCGAGCAGT TCAA GCTGCTCGCC TTGTTCGATCAGGGC Pput_0468 537849 - 536428 - | peptidase M23B TERM 500 537530 - 537583 + g 71 -11.5 -3.47349 | gap 1, overlap 537502 ACTTCGCGGTGGCCA GGCTCCTTGGC-GGCCTCGGCAACCG GTT CGGCGGCCGGGGCCTGCTGATCGGCC TTCTGGGTTTCGGGG TERM 501 537639 - 537623 - G 70 -10.1 -3.53811 | opp_overlap 537617 537638 TCGATCTGGGCGAAA GGCGAGC CTT GCTCACC TTCGCTTTGCACCAG Pput_0469 538063 - 539262 + | tyrosyl-tRNA synthetase TERM 502 539286 - 539319 + F 100 -22.5 -4.11371 | opp_overlap 539287 539290, overlap 539287 ATGGTTTAGCTATAT AGAAGCGGGGAGGCC GATA GGCCTCCCCGCTTCG TTTTCAGCAATATTA TERM 503 539287 - 539318 + F 100 -26 -3.06341 | opp_overlap 539287 539290, overlap 539286 TGGTTTAGCTATATA GAAGCGGGGAGGCC GATA GGCCTCCCCGCTTC GTTTTCAGCAATATT TERM 504 539318 - 539287 - f 100 -26 -2.91264 | opp_overlap 539287 539286, overlap 539290 TGGTTTAGCTATATA GAAGCGGGGAGGCC GATA GGCCTCCCCGCTTC GTTTTCAGCAATATT TERM 505 539315 - 539290 - f 100 -21.9 -3.60525 | opp_overlap 539287 539286, overlap 539287 TTTAGCTATATAGAA GCGGGGAGGCC GATA GGCCTCCCCGC TTCGTTTTCAGCAAT TERM 506 539434 - 539416 - f 82 -6 -4.87291 | opp_overlap 539416 CATCGGAACGAAAAA CTCCTTGA GAT TCAATGAG TTAAGTAGTGAAGGC TERM 507 539799 - 539747 - f 75 -13 -3.02902 | gap 1, opp_overlap 539753 539760, overlap 539744 539759 TAGTCAAAAAGATTA TCAGCA-TCACAAGTGACCATGCGA GAAA TCACATAGTCATTTGAGATTGCTGA GCCAAGTTTAGGGTT TERM 508 541668 - 541630 - f 71 -9 -3.73775 | opp_overlap 541630 541631, overlap 541631 541638 TGTACCTTGATCAAA CTCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGAC TTTTGTCAGATCGTT TERM 509 541630 - 541668 + F 91 -11.2 -4.41206 | opp_overlap 541630 541631 541638, overlap 541631 TGTACCTTGATCAAA CTCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGAC TTTTGTCAGATCGTT TERM 510 541667 - 541631 - f 74 -12.5 -2.84051 | opp_overlap 541630 541631, overlap 541630 541638 GTACCTTGATCAAAC TCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGA CTTTTGTCAGATCGT TERM 511 541631 - 541667 + F 83 -14.7 -3.24 | opp_overlap 541631 541630 541638, overlap 541630 GTACCTTGATCAAAC TCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGA CTTTTGTCAGATCGT TERM 512 545003 - 545041 + F 100 -17.7 -3.85698 | gap 1, opp_overlap 545009, overlap 545004 545009 GTCAAGATTCATTTC G-CAAAACCCCTATCTGC ACAT GCAGGTAGGGGTTTTGTC TTTGTGGGCAAAAAA TERM 513 545004 - 545039 + F 100 -21.4 -3.51934 | opp_overlap 545009, overlap 545003 545009 TCAAGATTCATTTCG CAAAACCCCTATCTGC ACAT GCAGGTAGGGGTTTTG TCTTTGTGGGCAAAA TERM 514 545009 - 545034 + F 100 -15.5 -4.84918 | opp_overlap 545009, overlap 545004 545003 ATTCATTTCGCAAAA CCCCTATCTGC ACAT GCAGGTAGGGG TTTTGTCTTTGTGGG TERM 515 545034 - 545009 - f 95 -13.3 -4.09864 | opp_overlap 545004 545003 545009 ATTCATTTCGCAAAA CCCCTATCTGC ACAT GCAGGTAGGGG TTTTGTCTTTGTGGG Pput_0470 545178 - 546137 + | biotin--protein ligase Pput_0471 546127 - 546876 + | pantothenate kinase Pput_0472 546884 - 547309 + | hypothetical protein TERM 516 547758 - 547779 + F 100 -11.7 -4.77173 | opp_overlap 547758 GCTCCATATAAACAA GGCAGATAT GAAA ATATCTGCC TTTGTTTTATCAGCG TERM 517 547779 - 547758 - f 86 -11.7 -4.14627 | opp_overlap 547758 GCTCCATATAAACAA GGCAGATAT GAAA ATATCTGCC TTTGTTTTATCAGCG TERM 518 548027 - 547998 - g 83 -4.9 -5.06414 | overlap 548018 GCTCCGGAAGAAAAA GCGCGCGGTATCA CCAT CAACACCGCTCAC GTTGAGTACAACTCG Pput_0473 547827 - 549020 + | elongation factor Tu TERM 519 549147 - 549170 + F 77 -7.4 -4.44667 | ATTCCCTCCTGACCT GCCATTTCAC CTCG GTGTGATGGC TTTCTTCTTACAGGA secE 549195 - 549563 + | preprotein translocase subunit SecE nusG 549573 - 550106 + | transcription antitermination protein NusG TERM 520 550126 - 550150 + F 100 -17.1 -4.4767 | opp_overlap 550119 550116 ACGAAGCATCCCATA CCCCGCAGCCC TGT GTGCTGCGGGG TTTTGTCGTCACTGG rplK 550226 - 550657 + | 50S ribosomal protein L11 rplA 550657 - 551352 + | 50S ribosomal protein L1 TERM 521 551384 - 551356 - f 95 -16.8 -3.65314 | gap 1, overlap 551358 CTGAACGTGTAAGAA CATGGCGGCGCGA CCAG TCGCGCCGCCA-G CAAAAATTGGGGTCC TERM 522 551383 - 551358 - f 100 -20.5 -3.40498 | overlap 551356 GAACGTGTAAGAACA TGGCGGCGCGA CCAG TCGCGCCGCCA GCAAAAATTGGGGTC TERM 523 551553 - 551536 - g 73 -3.3 -4.71482 | overlap 551527 ATGAAACGGTAAAAA CCAGGAG TAAA CCCGTGG CAATTAAACTCGAAG rplJ 551463 - 552050 + | 50S ribosomal protein L10 rplL 552127 - 552492 + | 50S ribosomal protein L7/L12 TERM 524 552538 - 552561 + F 100 -16 -4.8143 | opp_overlap 552531, overlap 552509 GAGCGAAAGGCTGAT GGCTGGTGGC TTAT GCCACCGGCC TTTTTCCGTTATTGG TERM 525 552626 - 552651 + F 72 -6.1 -4.43844 | opp_overlap 552614, overlap 552628 AGACACCCATGTGGG TGGCGCAAACC AAGG GGTTTGCACGA TTTTCTGGCTGCTCC rpoB 552713 - 556786 + | DNA-directed RNA polymerase subunit beta Pput_0481 556851 - 561050 + | DNA-directed RNA polymerase subunit beta' TERM 526 561184 - 561206 + F 100 -10.6 -4.86939 | opp_overlap 561183 561184, overlap 561202 TTTGTACCCTTAAAT TTGGTGAGGC TCC GTCTCGCCAA TTTTTGGCTTTCTTG TERM 527 561202 - 561214 + F 71 -7.7 -4.15044 | opp_overlap 561184 561183, overlap 561184 GTGAGGCTCCGTCTC GCCAA TTT TTGGC TTTCTTGCAAGACAA rpsL 561262 - 561633 + | 30S ribosomal protein S12 Pput_0483 561740 - 562210 + | 30S ribosomal protein S7 TERM 528 562388 - 562359 - g 71 -4.8 -4.42386 | GTCTGAGCCACAAAA TGGGCGAGGTGC ATGACG GCGCCGCGACCA CCGACTGGATGGTGC TERM 529 563978 - 563965 - g 80 -5.2 -4.83269 | opp_overlap 563965 563964, overlap 563951 AGAGCAGATGAAAAA CGGC GTTGTT GCCG GTTATCCTCTGATCG Pput_0484 562241 - 564388 + | elongation factor G TERM 530 564616 - 564587 - g 83 -4.9 -5.06414 | overlap 564607 GCTCCGGAAGAAAAA GCGCGCGGTATCA CCAT CAACACCGCTCAC GTTGAGTACAACTCG Pput_0485 564416 - 565609 + | elongation factor Tu TERM 531 565622 - 565656 + F 88 -16.6 -3.17723 | opp_overlap 565631, overlap 565631 TAATCACTCGACCGA TTGAAAAAACCCCCGC TCA GCGGGGGTTTTTTTTA TTGGGTTGACACTAA TERM 532 565647 - 565631 - f 100 -15.1 -5.09895 | opp_overlap 565631 565622 GACCGATTGAAAAAA CCCCCGC TCA GCGGGGG TTTTTTTTATTGGGT TERM 533 565631 - 565647 + F 100 -15.1 -6.11243 | opp_overlap 565631, overlap 565622 GACCGATTGAAAAAA CCCCCGC TCA GCGGGGG TTTTTTTTATTGGGT rpsJ 565751 - 566062 + | 30S ribosomal protein S10 rplC 566143 - 566778 + | 50S ribosomal protein L3 rplD 566791 - 567393 + | 50S ribosomal protein L4 rplW 567390 - 567689 + | 50S ribosomal protein L23 rplB 567704 - 568528 + | 50S ribosomal protein L2 rpsS 568545 - 568820 + | 30S ribosomal protein S19 rplV 568832 - 569164 + | 50S ribosomal protein L22 rpsC 569178 - 569864 + | 30S ribosomal protein S3 rplP 569877 - 570290 + | 50S ribosomal protein L16 Pput_0495 570290 - 570481 + | 50S ribosomal protein L29 rpsQ 570484 - 570750 + | 30S ribosomal protein S17 TERM 534 570950 - 570936 - g 78 -3.5 -5.09426 | GGTAAGGTCAAAAAA GGCCA GGTGA TGACC GCTGTCGTCGTACGT rplN 570774 - 571142 + | 50S ribosomal protein L14 TERM 535 571183 - 571162 - g 76 -8.1 -4.23758 | gap 1, overlap 571165 ATCCGACATGCAAAA GAT-TCGTCG TGA CGACGAGATC ATCGTGATCGCCGGC rplX 571154 - 571468 + | 50S ribosomal protein L24 rplE 571489 - 572028 + | 50S ribosomal protein L5 TERM 536 572090 - 572065 - g 100 -15.5 -4.8083 | GAAGAGCATGAAAAA CCGCGAGCTGA AGCG TCAGCTCACGG TAGCAAAGTTCGCCA rpsN 572042 - 572347 + | 30S ribosomal protein S14 TERM 537 572434 - 572414 - f 91 -12.6 -4.1552 | opp_overlap 572414 572417, overlap 572417 GACCTTGCCAACAAA CAAGCCCC TATAT GGGGCTTG TTTCGTTTCTGCCTT TERM 538 572414 - 572434 + F 91 -12.6 -4.15669 | opp_overlap 572414 572417, overlap 572417 GACCTTGCCAACAAA CAAGCCCC TATAT GGGGCTTG TTTCGTTTCTGCCTT TERM 539 572431 - 572417 - f 77 -8.5 -4.20367 | opp_overlap 572414 572417, overlap 572414 CTTGCCAACAAACAA GCCCC TATAT GGGGC TTGTTTCGTTTCTGC TERM 540 572417 - 572431 + F 73 -8.5 -4.18676 | opp_overlap 572417 572414, overlap 572414 CTTGCCAACAAACAA GCCCC TATAT GGGGC TTGTTTCGTTTCTGC rpsH 572556 - 572948 + | 30S ribosomal protein S8 rplF 572961 - 573494 + | 50S ribosomal protein L6 TERM 541 573714 - 573676 - g 71 -8.9 -3.86897 | TCGACCTTGGACAAA GACCTGCGT-GATGGCGCC ACT GGCAACATCGACGC-GGCC ACTAAGGTTGGCAAG rplR 573505 - 573855 + | 50S ribosomal protein L18 rpsE 573859 - 574359 + | 30S ribosomal protein S5 rpmD 574362 - 574538 + | 50S ribosomal protein L30 rplO 574542 - 574976 + | 50S ribosomal protein L15 TERM 542 575758 - 575808 + G 71 -5.2 -4.4261 | opp_overlap 575773, overlap 575773 575796 AGACTAGCCACTTGC CGCTGAAGGTGAACATGGCGGGGG TTA TCCCGGCCATTTTCGCGAGCAGCA TTTTGCTGTTCCCGG TERM 543 575773 - 575793 + G 73 -8.9 -4.07568 | opp_overlap 575773, overlap 575758 CGCTGAAGGTGAACA TGGCGGGGG TTA TCCCGGCCA TTTTCGCGAGCAGCA secY 574977 - 576308 + | preprotein translocase subunit SecY Pput_0508 576286 - 576453 + | ribosomal protein L36 TERM 544 576468 - 576500 + F 89 -12.9 -3.93401 | gap 1, opp_overlap 576473, overlap 576473 AGTGTGATCTGCGCT TCAAACCCAGCAGC TAGTGT GCTGCTGGGTT-GA TTATTCGTTTCTACA TERM 545 576473 - 576496 + F 84 -13.9 -3.59936 | opp_overlap 576473, overlap 576468 GATCTGCGCTTCAAA CCCAGCAGC TAGTGT GCTGCTGGG TTGATTATTCGTTTC TERM 546 576496 - 576473 - f 82 -13.9 -3.53224 | opp_overlap 576468 576473 GATCTGCGCTTCAAA CCCAGCAGC TAGTGT GCTGCTGGG TTGATTATTCGTTTC rpsM 576585 - 576941 + | 30S ribosomal protein S13 TERM 547 577221 - 577202 - g 70 -10 -3.62224 | ATACGGTCTGAAGAA CCTCGACG TTAA CGTCAAGG GTCCAGGTCCAGGTC Pput_0510 576960 - 577349 + | 30S ribosomal protein S11 TERM 548 577641 - 577614 - g 81 -4 -5.00616 | overlap 577596 577616 GCTGCCTCGAAAAAA GGCGCAACCGGT GAGA ACCTGCTGCAAC TGCTCGAGTGCCGTC rpsD 577365 - 577985 + | 30S ribosomal protein S4 TERM 549 578108 - 578084 - g 73 -8.5 -4.08216 | opp_overlap 578084 578087, overlap 578087 CGACCCGCGCCAAAA TTACGCTCGAG CCT CTCGAGCGTGG TTTCGGCCATACCCT TERM 550 578084 - 578108 + G 77 -12.9 -3.55563 | opp_overlap 578084 578087, overlap 578087 CGACCCGCGCCAAAA TTACGCTCGAG CCT CTCGAGCGTGG TTTCGGCCATACCCT TERM 551 578087 - 578105 + G 77 -14.6 -2.91144 | opp_overlap 578084 578087, overlap 578084 CCCGCGCCAAAATTA CGCTCGAG CCT CTCGAGCG TGGTTTCGGCCATAC TERM 552 578105 - 578087 - g 78 -14.6 -3.08032 | opp_overlap 578087 578084, overlap 578084 CCCGCGCCAAAATTA CGCTCGAG CCT CTCGAGCG TGGTTTCGGCCATAC Pput_0512 578008 - 579009 + | DNA-directed RNA polymerase subunit alpha TERM 553 579014 - 578989 - f 79 -9.7 -4.183 | GCAAGTCTTAAGAAA GACGACAAGGC GACC GCCTGATCGTC GTAATCACCGAACGT rplQ 579052 - 579438 + | 50S ribosomal protein L17 TERM 554 579455 - 579485 + F 100 -16.3 -4.74453 | opp_overlap 579462, overlap 579462 ACGTTCTGTCTGCTA CAGAAAACCGGGC CTAGT GCCCGGTTTTTTG TTTTTACATCTATTG TERM 555 579478 - 579462 - f 93 -10.8 -4.52589 | opp_overlap 579455 579462 GTCTGCTACAGAAAA CCGGGC CTAGT GCCCGG TTTTTTGTTTTTACA TERM 556 579462 - 579478 + F 100 -10.8 -5.93252 | opp_overlap 579462, overlap 579455 GTCTGCTACAGAAAA CCGGGC CTAGT GCCCGG TTTTTTGTTTTTACA Pput_0514 579611 - 581050 + | catalase TERM 557 581093 - 581064 - f 78 -12.2 -3.42621 | opp_overlap 581070, overlap 581070 AAGTCGAAGTGATAA GAAGAACCGCCC TCATTT GGGCGGTTTTTC AATGAATATCACTAC TERM 558 581070 - 581087 + F 87 -9.8 -4.67755 | opp_overlap 581064 581070 AAGTGATAAGAAGAA CCGCCC TCATTT GGGCGG TTTTTCAATGAATAT TERM 559 581087 - 581070 - f 79 -9.8 -4.04491 | opp_overlap 581070, overlap 581064 AAGTGATAAGAAGAA CCGCCC TCATTT GGGCGG TTTTTCAATGAATAT TERM 560 581501 - 581511 + G 71 -8.2 -3.86346 | GCTCGAATACAAGGT GCGC GGT GCGC TTTGTAAAGGCATCG Pput_0515 581214 - 581678 + | bacterioferritin TERM 561 581728 - 581702 - T 100 -20.2 -4.41494 | opp_overlap 581702 CAGGCTCAAGTAAAA GCCCCTGGCACC CTC GGTACCAGGGGC TTTTTCATTGCGCTG TERM 562 581702 - 581728 + T 100 -18 -4.87291 | opp_overlap 581702 CAGGCTCAAGTAAAA GCCCCTGGCACC CTC GGTACCAGGGGC TTTTTCATTGCGCTG uvrA 584585 - 581751 - | excinuclease ABC subunit A TERM 563 582457 - 582416 - G 71 -13.8 -2.64099 | overlap 582400 582415 GCCCCGGACCATAAC CCCGCGAGC-GTGACTCCGG TACA CCGGAGA-ACAGCTCGCGGA TCGGCGTGAAGATGC Pput_0517 584715 - 586109 + | major facilitator transporter Pput_0518 586119 - 586664 + | single-strand DNA-binding protein TERM 564 586717 - 586698 - T 100 -15 -4.07455 | opp_overlap 586698 CAGCAAGACCAGAAA CCCAGGGC AGTT GCCCTGGG TTTTTTTATGGGCAG TERM 565 586698 - 586717 + T 100 -15 -5.60993 | opp_overlap 586698 CAGCAAGACCAGAAA CCCAGGGC AGTT GCCCTGGG TTTTTTTATGGGCAG Pput_0519 588137 - 586755 - | GntR family transcriptional regulator Pput_0520 588327 - 589124 + | hypothetical protein Pput_0521 589146 - 589907 + | short-chain dehydrogenase/reductase SDR TERM 566 590525 - 590542 + G 78 -6.9 -4.65747 | opp_overlap 590519 590518 AGGCCAAACGGTCAA CCGCTGG CTCA CCACCGG TTTTCTTGCCGCTTC Pput_0522 590055 - 590645 + | molybdopterin oxidoreductase Fe4S4 region TERM 567 591777 - 591764 - g 80 -5.2 -4.82901 | GCTGCCGGACAAAAA CCGC GTCACT GCGG CACTGGGCAAGCTCA TERM 568 592600 - 592588 - g 71 -4.7 -4.42386 | overlap 592589 TCGCCATCGACAAAA TGGCC GAA GGCCC GTTCCCCGAGCACTA Pput_0523 590658 - 593123 + | formate dehydrogenase, alpha subunit Pput_0524 593123 - 594073 + | formate dehydrogenase, beta subunit Pput_0525 594070 - 594726 + | formate dehydrogenase, gamma subunit Pput_0526 594731 - 595657 + | formate dehydrogenase accessory protein FdhE Pput_0527 595797 - 597224 + | selenocysteine synthase Pput_0528 597221 - 599143 + | selenocysteine-specific translation elongation factor Pput_0529 600350 - 599352 - | asparaginase TERM 569 599853 - 599820 - G 81 -12.5 -3.74693 | gap 1, opp_overlap 599811 TGGCAGCGCAGCAAA GGCATCGAACGCTTCG CTG CGTAGC-TTCGACGCC CGACAGCCATGCAGC TERM 570 600397 - 600377 - R 100 -11.1 -4.99645 | AGCGGACAAAGAAAA GCCGCCC GCGGAAG GGGCGGC TGGGCAGGGGAGGAT Pput_0530 601856 - 600414 - | amino acid carrier protein TERM 571 601021 - 601061 + g 72 -11.8 -3.33696 | overlap 601023 CCCGGGTGTTTCACC GC-GGCCACGGCAGCGACGT TCG GCG-CGCTGCCCAGGCCTGC TTCGTTGGCGAACAC TERM 572 601023 - 601058 + g 70 -13.2 -2.84098 | gap 1, overlap 601021 CGGGTGTTTCACCGC GGCCACGGCAGCGACGT TCG GCG-CGCTGCCCAGGCC TGCTTCGTTGGCGAA Pput_0531 602035 - 602844 + | Cro/CI family transcriptional regulator Pput_0532 603296 - 602856 - | hypothetical protein Pput_0535 604911 - 605795 + | dTDP-4-dehydrorhamnose reductase Pput_0536 605788 - 606720 + | NAD-dependent epimerase/dehydratase Pput_0537 607194 - 606751 - | HxlR family transcriptional regulator Pput_0538 607298 - 608503 + | major facilitator transporter Pput_0539 609174 - 608491 - | OmpW family protein Pput_0540 609817 - 609284 - | hypothetical protein Pput_0541 611188 - 609923 - | hypothetical protein TERM 573 611149 - 611135 - G 71 -8.5 -3.8709 | overlap 611123 AAAGGCGGTCAGAAA CGCCG TGAAG CGGCG GTTGGCCAGGCTGGC Pput_0542 611898 - 611188 - | ABC transporter related TERM 574 611580 - 611525 - G 78 -14.7 -3.01712 | gap 2, opp_overlap 611541, overlap 611569 GCCGCCTGGTCAACA CTGCCATGGCGCTGCTCGGCGCGGGCC TTGC GGCT-GCGC-GAGAAGCGGCAGGGCAG CTCGACGTTTTCACG Pput_0543 612480 - 611899 - | hypothetical protein TERM 575 611924 - 611940 + g 86 -13.7 -3.89614 | overlap 611911 ACCGTTGCCTTGGCC GGCGTGG TTT CCACGCC TTTCTGGCCATTGGG Pput_0544 612611 - 612955 + | hypothetical protein Pput_0545 613976 - 613104 - | thioredoxin TERM 576 613311 - 613339 + g 76 -8.1 -4.16943 | opp_overlap 613303 CTGATAAGCCGCCTC GTCGTCTTGCG GGTTCTG CGCCAGACGGC TTTTAAGGTCTGCCA Pput_0546 614664 - 614008 - | methyltransferase type 12 Pput_0547 615144 - 614668 - | hypothetical protein Pput_0548 615221 - 615685 + | transcriptional regulator NrdR TERM 577 616224 - 616208 - g 70 -10.1 -3.55444 | TGGCCAGTGGTGAAA GCCAGTG GAT CACCGGC CCGGCCGCGCGCTCA TERM 578 616408 - 616431 + G 70 -10.2 -3.61398 | gap 1 CTGGTCGATGGCCGC CTGCGCCTGCC ACT GGC-GGCGCCG TTCTTCCAGGCGGGC Pput_0549 615688 - 616818 + | riboflavin biosynthesis protein RibD Pput_0550 616861 - 617526 + | riboflavin synthase subunit alpha TERM 579 617618 - 617597 - g 72 -7.3 -4.13767 | overlap 617580 TCCGCCAGGGCAAAA TGGTCATCC TGAT GGATGACGA AGACCGCGAGAACGA Pput_0551 617545 - 618636 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 580 618680 - 618705 + F 73 -11.8 -3.04144 | GAGTCCAGACCCCTG TCGAGGCCGC TTGTAT GCGGCCTCGC TCTTGAAGATGAGAA ribH 618728 - 619204 + | riboflavin synthase subunit beta nusB 619201 - 619701 + | transcription antitermination protein NusB TERM 581 620135 - 620181 + G 100 -17.2 -3.58905 | TGTTCGGCCGCGTGC CGGCTGGCCAGGCCTTGCGCCG CAG CGGTGCAAGGCCGGGTGACCTG TTGTGTGTCGGCGGT TERM 582 620202 - 620226 + G 73 -12.9 -3.21099 | overlap 620189 TGTCGGCGGTTCGCT GGGCAAGGC CGCCGGT GCCTTGCCC TTGGTGCTGGGCGAG Pput_0554 619720 - 620688 + | thiamine monophosphate kinase Pput_0555 620685 - 621188 + | phosphatidylglycerophosphatase A Pput_0556 621205 - 621948 + | hypothetical protein TERM 583 621975 - 621993 + F 72 -10.2 -3.51032 | CCAAGGTACATCGCG GCCCCCTG TGG CAGCGGGC TTGTGATTGAGCGAT ribA 622130 - 622747 + | GTP cyclohydrolase II Pput_0558 622744 - 623163 + | hypothetical protein Pput_0559 623163 - 623975 + | periplasmic binding protein Pput_0560 625824 - 623953 - | TonB-dependent receptor, plug Pput_0561 628067 - 626172 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 584 626354 - 626370 + g 86 -7.9 -4.69656 | opp_overlap 626303 CCACCGCAGCGCCCG CGCCACC CAT GATGGCG TTTTCTTCAATGGTT Pput_0562 629132 - 628245 - | polyprenyl synthetase TERM 585 628692 - 628676 - G 72 -13.7 -2.70932 | opp_overlap 628675 628674 CCTGGCCGCCAACCA TGCCGGC CGG GCCGGCA GCTTTGGCCAGTACC Pput_0563 629371 - 629129 - | exodeoxyribonuclease VII small subunit TERM 586 629551 - 629577 + r 70 -10.1 -3.53091 | gap 1, overlap 629552 629556 GGAGCGGGCTTGCTC GCGATGCGCCGC GCGG GCGGCGC-TCGA TTTCAGCGCCGCCAT TERM 587 629552 - 629576 + r 75 -13.6 -2.71712 | gap 1, overlap 629551 629556 GAGCGGGCTTGCTCG CGATGCGCCGC GCGG GCGGCGC-TCG ATTTCAGCGCCGCCA TERM 588 629556 - 629573 + r 78 -14.1 -2.64155 | overlap 629552 629551 GGGCTTGCTCGCGAT GCGCCGC GCGG GCGGCGC TCGATTTCAGCGCCG Pput_0564 630270 - 629620 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 589 630339 - 630318 - H 75 -5.7 -4.63218 | opp_overlap 630319, overlap 630319 630320 TCGGGGCGAACAAAA TGCGCGCGC AAGG GCGCCCGGA TGGCCCCTGCATGAC TERM 590 631352 - 631338 - g 78 -7 -4.56775 | ACCTGTCCTGAAAAA GGGCTC CTC GTGCCC CAGCAGACCTACCAG Pput_0565 630642 - 631622 + | zeta toxin family protein Pput_0566 632537 - 631644 - | putative esterase Pput_0567 633966 - 632638 - | integral membrane sensor signal transduction histidine kinase Pput_0568 634658 - 633966 - | two component transcriptional regulator TERM 591 634889 - 634911 + G 86 -6.9 -4.99043 | overlap 634890 GGGTTCGGGGATGGC TGGCGCTGG GGTTG CTGGCGCCG TTTTCTTTATCGGCA Pput_0569 634840 - 637014 + | TonB-dependent siderophore receptor TERM 592 637077 - 637047 - T 100 -19.8 -4.07687 | overlap 637050 AGGTGCGCCGTAAAA CAAGGCCGCGCC GGCAAAG GGCGCGGCCTTG AGGCTGAATGATGAG TERM 593 637074 - 637050 - T 100 -15.7 -4.17048 | overlap 637047 TGCGCCGTAAAACAA GGCCGCGCC GGCAAAG GGCGCGGCC TTGAGGCTGAATGAT Pput_0570 637655 - 637191 - | hemerythrin HHE cation binding domain-containing protein Pput_0571 637939 - 637784 - | hypothetical protein TERM 594 638050 - 638060 + r 73 -5.4 -4.59853 | CATATGATTAGTATT GGTT TTT AACC TTTTTAAAGCGTTGA Pput_0572 638924 - 638151 - | hypothetical protein Pput_0573 639869 - 638934 - | copper resistance B precursor TERM 595 639901 - 639911 + r 100 -4 -5.67063 | TTTGTCGCTGCCATG TGAT TCC ATCA TTTTTTTGTGGTCCA Pput_0574 642050 - 640191 - | CopA family copper resistance protein TERM 596 641608 - 641625 + g 71 -5.5 -4.29432 | overlap 641609 AAGCCAGAGTGGCTG TGGTACC AGTA GGTGCCG TTTTGATGGAGTTTG Pput_0575 642482 - 642327 - | hypothetical protein TERM 597 642784 - 642768 - R 100 -10.8 -4.90266 | opp_overlap 642768 GTTAGGAATTAAAAA GCCGGC TTGTG GCCGGC TTCTCGGGGACGCTT TERM 598 642768 - 642784 + r 74 -11.5 -3.29043 | opp_overlap 642768 GTTAGGAATTAAAAA GCCGGCT TGT GGCCGGC TTCTCGGGGACGCTT Pput_0576 643691 - 642990 - | hypothetical protein TERM 599 643844 - 643859 + r 85 -11.8 -3.9712 | opp_overlap 643844 TCCTGCATAAAAAAA CCCCGC CTAA GCGGGG TTTCTCCTGCAATCG TERM 600 643859 - 643844 - R 100 -11.8 -5.60993 | opp_overlap 643844 TCCTGCATAAAAAAA CCCCGC CTAA GCGGGG TTTCTCCTGCAATCG Pput_0577 644405 - 643878 - | inorganic pyrophosphatase Pput_0578 645313 - 644498 - | hypothetical protein Pput_0579 645981 - 645334 - | SNARE associated Golgi protein Pput_0580 646657 - 646199 - | GCN5-related N-acetyltransferase TERM 601 646324 - 646338 + g 73 -3.5 -4.72029 | GCATGCGCACGGCAT TGGTC TCTTT GGCCA TTTTCTTCGCTTCGC Pput_0581 647583 - 646765 - | ethanolamine ammonia-lyase small subunit Pput_0582 648986 - 647592 - | ethanolamine ammonia lyase large subunit Pput_0583 650481 - 649033 - | ethanolamine transproter TERM 602 649850 - 649868 + g 72 -8 -4.13014 | opp_overlap 649837, overlap 649854 AACGGCAGGAAGCTG CTGGCGCC GAC GGCGTCCG TTTTGGCGATGTCGA TERM 603 650554 - 650587 + r 71 -4.5 -4.52589 | opp_overlap 650554, overlap 650555 TGCTGCAGGAAGCGA GCCAGGGCGGC TGGTGCATGGTT GCTGCCCTGGG TTTTGTGTAAAGCAG TERM 604 650625 - 650682 + r 75 -11.1 -3.53012 | opp_overlap 650663 CTCTTCGCGGGCTTG CCCGCTCCCACAGGTACCGCACCGGTT CTGG AACCAACGGTGAACCTGTAGGAGCGGG TTTACCCGCGAAGAA Pput_0584 652229 - 650709 - | aldehyde dehydrogenase TERM 605 652318 - 652329 + H 71 -4.4 -4.57569 | opp_overlap 652314 652318, overlap 652314 CGCCAGGCAAATCAA TGAC TTGA GTCA TTTTTACGGGGCTGA TERM 606 652749 - 652717 - g 70 -10.5 -3.58162 | opp_overlap 652720 652721, overlap 652713 652719 CGACCATGAAATGAA CAGCCTGCACCAGCA GCT TTCCGGCGCAGGCCA CGCGGTGCTGCTGAC TERM 607 652747 - 652719 - g 74 -13.1 -3.36251 | opp_overlap 652720 652721, overlap 652717 652713 ACCATGAAATGAACA GCCTGCACCAGCA GCT TTCCGGCGCAGGC CACGCGGTGCTGCTG TERM 608 652953 - 652979 + G 81 -15.1 -3.01924 | TCCGTGGCCGTCACA CCGGGCTGACC TGCTC GGCCAGCCCGG TGTTCGACCCGCATG TERM 609 654302 - 654262 - g 73 -13.2 -3.11316 | gap 1, opp_overlap 654268 CGACCAGGCAATAGA GGGCGAGGGCGTTGCCCTC GTTC GCGGGCAA-GCCCGCTCCC ACAGGTCCGGCGGTG Pput_0585 652484 - 654499 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 610 655704 - 655692 - g 74 -9.1 -3.85817 | overlap 655702 ACGGCCTGCCAGAAA GCGTC AAC GACGC CGACCAGGTGATCTG Pput_0586 654566 - 655915 + | UDP-N-acetylmuramate Pput_0587 655912 - 656541 + | aromatic acid decarboxylase Pput_0588 656538 - 656825 + | hypothetical protein Pput_0589 657576 - 656932 - | hypothetical protein Pput_0590 659415 - 657604 - | MORN repeat-containing protein Pput_0591 660639 - 659551 - | alcohol dehydrogenase TERM 611 660105 - 660115 + g 83 -4.6 -5.02074 | overlap 660102 CGGTTTGCCCAAGCA GGCT GCC GGCC TTTTTTACCGCGTGC Pput_0592 661774 - 660668 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Pput_0593 662793 - 661771 - | transketolase, central region Pput_0594 663804 - 662827 - | pyruvate dehydrogenase (acetyl-transferring) TERM 612 663437 - 663477 + g 91 -9.6 -4.59773 | gap 1 GCCCCGGCCACCAGT GGTGCGC-CGGCGCCGACG ATAC CGTTGGCACCGAGCATGCC TTTTTCCAGGTCGGC TERM 613 663515 - 663530 + g 76 -6 -4.65916 | ATCGAGCCGCCCTTG CCGCCG CACA CGCCGG TTTTCTTGCCGTAGA Pput_0595 664882 - 663827 - | ATP-NAD/AcoX kinase TERM 614 666019 - 666046 + G 82 -11.3 -4.03413 | gap 1, opp_overlap 665998 665997 GGGTGAGCGCGTCGT CCGCCCAGCGCC TGCCT GGT-CTGGGCGG TTTGTATGGCCGGGT Pput_0596 665166 - 667019 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 615 667027 - 667043 + T 88 -15.1 -3.53012 | AGGGGTAGAGCCCTG GGGGCGC GCT GCGCCCC TTTCGCGACGCAAGG TERM 616 667058 - 667115 + T 70 -12 -2.69471 | gap 3, opp_overlap 667057 667071, overlap 667058 CTTTCGCGACGCAAG GCCGCTCCCACAAGGACG-GCGTCAGTCC TGA GGCATG-CGCGCAACCT-GTGGGAGCGGC CTTGTGTCGCGATAG TERM 617 667171 - 667189 + T 79 -13.1 -3.4252 | opp_overlap 667171 GCAGGCAATAAAAAA CCCCGGC ACAGG GCCGGGG TTCTGGTACATCACA TERM 618 667189 - 667171 - T 100 -13.1 -5.4833 | opp_overlap 667171 GCAGGCAATAAAAAA CCCCGGC ACAGG GCCGGGG TTCTGGTACATCACA Pput_0597 668568 - 667213 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 619 668204 - 668241 + g 70 -10.6 -3.53811 | gap 1, opp_overlap 668211 ATCATCGCGTCCTTG GCCGAAACCTTGTCGCC CATCA GGCGA-ATGGTGTCGGC TTTCGGGCCGATGAA Pput_0598 669047 - 668586 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 620 669120 - 669141 + r 79 -8.6 -4.39386 | AACGTTTCTCTCGAA CCCCGGCC CACTTA GGCCAGGG TTTTCATCATTTGGG Pput_0599 669603 - 669148 - | 3-dehydroquinate dehydratase dipZ 671555 - 669783 - | thiol:disulfide interchange protein precursor TERM 621 670442 - 670452 + g 86 -8.2 -4.62302 | GCCCCAGCAGCAGTA CGCC AAT GGCG TTTTTCACCGTGTTC Pput_0601 673706 - 671745 - | methyl-accepting chemotaxis sensory transducer TERM 622 673817 - 673803 - R 86 -5.6 -5.24129 | opp_overlap 673801 673803 673805, overlap 673805 TGGTGTCAGAAAAAA GTGGCA CAG TGCCTC TATTGGTGTGGCTGG Pput_0602 675305 - 673950 - | response regulator receiver modulated diguanylate cyclase Pput_0603 675554 - 676621 + | hypothetical protein Pput_0604 676624 - 677157 + | NUDIX hydrolase TERM 623 677339 - 677368 + G 74 -2.2 -4.91109 | gap 2, opp_overlap 677362, overlap 677339 677340 CAGAGTGGGGCTTCG C-GGTCG-GCCT CAACCCCA AGGCACGACCAG TTTTTGTCCTCAGCA TERM 624 677611 - 677562 - g 83 -11.9 -4.05788 | CGCCGCGAAAGCAAA GGCCGTGGCGGCAAGACCGTGAC CACT GTCACCGGCGTGCCGCTGCCGCC CGACCAGCTCAAGGA Pput_0605 677214 - 677768 + | translation initiation factor SUI1 Pput_0606 677919 - 679832 + | arginine decarboxylase TERM 625 679891 - 679837 - f 78 -14.4 -2.52464 | gap 2 TGTCGTCGTAATTGA CGGGGCCGC-CCCGCAAAAAC-TGCA CGGTT TGCTTGTTTTTGTGGGCGCGGCCTCG CGTCGCGATATGAGG Pput_0607 680003 - 680458 + | hypothetical protein TERM 626 680464 - 680480 + T 78 -12.3 -3.53012 | ATGGCTGTGAGCATG TGAGGGC TTC GCCCTCA TTTCGCGACACAAGG Pput_0608 681963 - 680626 - | MATE efflux family protein TERM 627 682159 - 682201 + H 83 -14.8 -3.16683 | overlap 682164 CGACCATGGTCTGAC CTGGCGCGCAACGCCGGGTG CTG CACCTGACGTTGCGCTATAG TTGCTGCCCTCACGT TERM 628 682164 - 682196 + H 100 -19.9 -2.93901 | overlap 682159 ATGGTCTGACCTGGC GCGCAACGCCGGGTG CTG CACCTGACGTTGCGC TATAGTTGCTGCCCT TERM 629 683218 - 683202 - g 76 -7.9 -4.31692 | AATCCATGACGAAAA GGGCAAG CTG CTGGCCC AGGCCACCAGCGATG TERM 630 685018 - 684993 - g 77 -14.7 -2.89564 | opp_overlap 685006 CGGCCAGTTGATAGA GGCCGGCCAAG GCCG CCTGGCCAGCC TGGCGTTCGGTGGTG TERM 631 686386 - 686370 - g 70 -10.1 -3.56704 | overlap 686367 686366 GCTGCAGGAAAGCAA CCTGGCC AGC AGCCAGG TCGATCAGCGCCTGT Pput_0609 682243 - 687144 + | alpha-2-macroglobulin domain-containing protein TERM 632 687213 - 687166 - T 78 -12.6 -3.31144 | opp_overlap 687147 GCTCTACGCGGACAA TGTGGGAGCGGCCTTGCGTCGC GATA GGGCCGCAAAGCGGCCCCGACA ATTCAAGCGGCGAAG Pput_0610 687589 - 687296 - | hypothetical protein TERM 633 688418 - 688449 + G 73 -10.8 -3.61398 | gap 1 AGGAGCCGCTGGTGT TGGCGCCA-CGCCAG GAG CCGGCCCTGGCGCCA TTGTTGGCCCGGCGC Pput_0611 687667 - 690021 + | penicillin-binding protein 1C TERM 634 690448 - 690418 - g 70 -12.6 -2.90496 | overlap 690415 TCGGGCGCGAAACCA CGTTGGGTGAATTG CAG CAATACACCCAGCG CCTGACCCAACGCTA Pput_0612 690114 - 691778 + | polypeptide-transport-associated domain-containing protein Pput_0613 692629 - 691853 - | two component LuxR family transcriptional regulator TERM 635 692116 - 692140 + g 72 -4.2 -4.60487 | CTGCATCACTGGCAC GCCGGTGG GTGCCTTGG CCACGGGC TTTTTCCAGGTCCTG Pput_0614 693219 - 692749 - | peptidase A24A, prepilin type IV TERM 636 693458 - 693440 - R 74 -10.2 -3.6106 | opp_overlap 693440 693437, overlap 693441 GCGAACATCCGCAAA GCCGGTGC CAT GCACCGGG TCAATTGCTTCGCGG TERM 637 693457 - 693441 - R 76 -13.7 -2.76315 | opp_overlap 693440 693437, overlap 693440 CGAACATCCGCAAAG CCGGTGC CAT GCACCGG GTCAATTGCTTCGCG Pput_0615 694093 - 693524 - | hypothetical protein TERM 638 694136 - 694165 + r 77 -11.5 -3.66178 | opp_overlap 694153 694154 GAGGATAGCCGCTGA GTGCCTTGTGC ACAGAATC GCGCAAGGCAC TTTCGCGTTCGCGGG Pput_0616 694748 - 694113 - | hypothetical protein TERM 639 694398 - 694412 + g 72 -4.2 -4.56775 | overlap 694400 GGTGTCGTAGTCACG CACTTG GCG CAAGCG TTTTTCCAGGCGCAT Pput_0617 695520 - 694771 - | methyltransferase type 11 Pput_0618 695822 - 695517 - | hypothetical protein TERM 640 695631 - 695648 + g 71 -8.4 -3.85698 | overlap 695641 CACGTCACCGATTTC CTGGCC GGCGTG GGCCAG TTTGTCGGCAGGCAG Pput_0619 696752 - 695901 - | dehydratase fabG 698107 - 696755 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 641 698404 - 698443 + G 70 -12.1 -3.17392 | opp_overlap 698410 698425 GGCCGGTGCCGTGCT CAAGCACTCGCGCGACA TGAACC TGACCCGCGAGTGCGTG TTGGGTTCGCGCCTG Pput_0621 698225 - 699502 + | acetyl-CoA acetyltransferase TERM 642 700033 - 700043 + G 74 -4.6 -4.67011 | CAGTTGCGCACCTTG CCGG AAG TCGG TTTTTCGCTGCCGTT Pput_0622 699592 - 700371 + | helix-turn-helix domain-containing protein Pput_0623 702380 - 700437 - | methyl-accepting chemotaxis sensory transducer TERM 643 700880 - 700848 - G 70 -9.8 -3.62096 | gap 1, opp_overlap 700851 GGCCACCACGGCAAA GCCGCGGCCC-TGCT CACC AGCACGGGCCGCTTC GATGGCGGCGTTCAG TERM 644 700851 - 700877 + g 78 -14.5 -3.05715 | gap 1, opp_overlap 700848 CACCACGGCAAAGCC GCGGCCC-TGCT CACC AGCACGGGCCGC TTCGATGGCGGCGTT Pput_0624 702958 - 702548 - | MerR family transcriptional regulator Pput_0625 705354 - 702955 - | heavy metal translocating P-type ATPase TERM 645 704942 - 704965 + g 78 -10.3 -4.08216 | TCCTTGGTCGATTGC GGCAGGCTG GCGCTG TAGCCTGCC TTTTGCACAGCGTCG Pput_0626 705793 - 705407 - | hypothetical protein Pput_0627 705938 - 706135 + | heavy metal transport/detoxification protein Pput_0628 706243 - 707424 + | Bcr/CflA subfamily drug resistance transporter Pput_0629 707665 - 707775 + | hypothetical protein TERM 646 707885 - 707907 + F 79 -7.1 -4.77438 | gap 1, overlap 707888 CCGCCTCGCTGCTTG CCA-TGGGTA GGCA TACCCAGTGG TTTTTCGTCATGAGT Pput_0630 708060 - 708773 + | regulatory protein, ArsR Pput_0631 709750 - 708794 - | adenosine deaminase Pput_0632 710513 - 709827 - | short chain dehydrogenase Pput_0633 711466 - 710882 - | hypothetical protein Pput_0634 712138 - 711476 - | TetR family transcriptional regulator Pput_0635 713146 - 712229 - | LysR family transcriptional regulator TERM 647 712345 - 712325 - G 71 -5.4 -4.4009 | GCTCAGGTCATAAAA GCGCTC CTTGGGCTT GAGCGC ACGCAAACGGCCTTG TERM 648 712948 - 712984 + g 73 -10.8 -3.64259 | gap 2, opp_overlap 712947 712948 CCGTCAGCGAGAAAC CGGCGCGGCC-GCG-CTG ACA CAGGCGCAGGCCGAGGCG TTGTTCGAGGTCGTT TERM 649 713595 - 713570 - g 70 -7.5 -4.08216 | CCAGCTGGCGGAAAA GATCGCCGAGC TGGT GCCGGGCAATC TGAATCACGTCTTCT Pput_0636 713265 - 714611 + | beta alanine--pyruvate transaminase TERM 650 714624 - 714663 + F 75 -6.3 -4.62441 | gap 1, overlap 714625 714625 714628 TGATCTTTCCGATTT TGA-TGCCAGGCGCATGC CCGCA GCGCGCGCCTGGCTCTCC TTTGTTTATCTGGAG TERM 651 714625 - 714660 + F 81 -13.3 -3.24105 | gap 1, overlap 714624 714625 714628 GATCTTTCCGATTTT GATGCCAGGCGCATGC CCGCA GCGCGCGCCTGGC-TC TCCTTTGTTTATCTG TERM 652 714628 - 714658 + F 85 -16.1 -3.16414 | overlap 714625 714625 714624 CTTTCCGATTTTGAT GCCAGGCGCATGC CCGCA GCGCGCGCCTGGC TCTCCTTTGTTTATC Pput_0637 714685 - 716178 + | methylmalonate-semialdehyde dehydrogenase TERM 653 716223 - 716190 - f 100 -26.9 -3.6215 | opp_overlap 716190 716194, overlap 716194 TTAAGGGAGGGTAAA CAAAGCGGGGAGGCC GTCA GGCCTCCCCGCTTTG TTTTTGGGGGTTGGT TERM 654 716190 - 716223 + F 100 -26.9 -4.62872 | opp_overlap 716190 716194, overlap 716194 TTAAGGGAGGGTAAA CAAAGCGGGGAGGCC GTCA GGCCTCCCCGCTTTG TTTTTGGGGGTTGGT TERM 655 716194 - 716219 + F 100 -21.9 -4.86385 | opp_overlap 716190 716194, overlap 716190 GGGAGGGTAAACAAA GCGGGGAGGCC GTCA GGCCTCCCCGC TTTGTTTTTGGGGGT TERM 656 716219 - 716194 - f 100 -21.9 -4.44046 | opp_overlap 716194 716190, overlap 716190 GGGAGGGTAAACAAA GCGGGGAGGCC GTCA GGCCTCCCCGC TTTGTTTTTGGGGGT TERM 657 716763 - 716745 - f 82 -6 -4.87291 | opp_overlap 716745 CATCGGAACGAAAAA CTCCTTGA GAT TCAATGAG TTAAGTAGTGAAGGC TERM 658 718754 - 718764 + F 70 -3.2 -4.77036 | AATTGCTTGATTCAT TGTC GAA GACG TTTTTCCTGGTCAGA TERM 659 718781 - 718819 + F 74 -6.8 -4.41206 | opp_overlap 718781 718789 718792, overlap 718782 718785 718793 718814 TTTTCCTGGTCAGAA CCTGGAAATGAGCATTCG TAT CGAATGTTGATTTCTGGC TTTTGTCAGATCGTT TERM 660 718782 - 718818 + F 70 -10.3 -3.24 | opp_overlap 718781 718789 718792, overlap 718781 718785 718793 718814 TTTCCTGGTCAGAAC CTGGAAATGAGCATTCG TAT CGAATGTTGATTTCTGG CTTTTGTCAGATCGT TERM 661 722155 - 722193 + F 100 -17.7 -3.85698 | gap 1, opp_overlap 722161, overlap 722156 722161 GTCAAGATTCATTTC G-CAAAACCCCTATCTGC GCAT GCAGGTAGGGGTTTTGTC TTTGTGGGCAAAAAA TERM 662 722156 - 722191 + F 100 -21.4 -3.51934 | opp_overlap 722161, overlap 722155 722161 TCAAGATTCATTTCG CAAAACCCCTATCTGC GCAT GCAGGTAGGGGTTTTG TCTTTGTGGGCAAAA TERM 663 722186 - 722161 - f 95 -13.3 -4.09864 | opp_overlap 722156 722155 722161 ATTCATTTCGCAAAA CCCCTATCTGC GCAT GCAGGTAGGGG TTTTGTCTTTGTGGG TERM 664 722161 - 722186 + F 100 -15.5 -4.84918 | opp_overlap 722161, overlap 722156 722155 ATTCATTTCGCAAAA CCCCTATCTGC GCAT GCAGGTAGGGG TTTTGTCTTTGTGGG Pput_0638 722388 - 723047 + | paraquat-inducible protein A TERM 665 723484 - 723515 + G 73 -8.8 -4.08767 | TCCATGCTGGATATC TTCGTCATTGCCAT CCTG GTGGCAGTGGTGAA TTTTGGCCGAATAGC Pput_0639 723034 - 723657 + | paraquat-inducible protein A Pput_0640 723641 - 725950 + | hypothetical protein TERM 666 725982 - 725958 - T 86 -10.6 -4.21275 | opp_overlap 725958, overlap 725961 CCAAGTGATGTAAAA GTAGGGCCGC CAAAC GCGGCCCCGC TTTTTTGTGGGAGCG TERM 667 725958 - 725982 + T 100 -10.6 -5.24129 | opp_overlap 725958 725961 CCAAGTGATGTAAAA GTAGGGCCGC CAAAC GCGGCCCCGC TTTTTTGTGGGAGCG TERM 668 725979 - 725961 - T 75 -13.1 -3.11476 | opp_overlap 725958, overlap 725958 AGTGATGTAAAAGTA GGGCCGC CAAAC GCGGCCC CGCTTTTTTGTGGGA TERM 669 726062 - 726078 + T 82 -13.7 -3.53012 | overlap 726027 AAGCTGAGATTGCCG GGGCTGC TCT GCAGCCC TTTCGCGCCACACAG TERM 670 726171 - 726142 - T 85 -15.9 -3.09234 | opp_overlap 726149, overlap 726149 ATAAATCGCAGGCAA CAAAAAACCGACC CTAG GGTCGGTTTTTCG ACTAGCGCGTCGCTT TERM 671 726149 - 726164 + T 93 -10.4 -4.62069 | opp_overlap 726142 726149 GCAGGCAACAAAAAA CCGACC CTAG GGTCGG TTTTTCGACTAGCGC TERM 672 726164 - 726149 - T 100 -10.4 -5.4833 | opp_overlap 726149, overlap 726142 GCAGGCAACAAAAAA CCGACC CTAG GGTCGG TTTTTCGACTAGCGC rpsT 726463 - 726185 - | 30S ribosomal protein S20 TERM 673 726668 - 726688 + H 77 -13.3 -3.00774 | GAGTATCGCACATTC GGACGCTGT CTG GCAGCGTCC TCTGTCATTGGCGTG Pput_0642 726714 - 728252 + | integral membrane protein MviN TERM 674 728293 - 728335 + F 90 -15.5 -3.40522 | TTTTCGCATTCCACG CCGCCCTTGGGCGCTGCTG CCTGT CACCAGCGCCCGGGTGTGG TTATAATCGGCCACT Pput_0643 728353 - 729321 + | bifunctional riboflavin kinase/FMN adenylyltransferase ileS 729318 - 732149 + | isoleucyl-tRNA synthetase TERM 675 732194 - 732229 + G 87 -17 -2.90075 | gap 1 CATGGCTTTGGCTGA GCTTGCTGGTCCTGGTC ATC GACCAGG-CCACCAAGC TGTACTTCAACAACG lspA 732142 - 732657 + | lipoprotein signal peptidase Pput_0646 732650 - 733087 + | peptidylprolyl isomerase, FKBP-type TERM 676 733884 - 733861 - g 73 -13.2 -3.14468 | gap 1, overlap 733880 GCCGAGGACATGCAA CGCGG-CTGGT TTG ACCAGACCGCG CGGATCGGCATCACC ispH 733102 - 734049 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Pput_0648 734608 - 734126 - | hypothetical protein TERM 677 734965 - 734984 + G 100 -10 -4.96848 | gap 1 GATCGGATTGATGCT GCTGGC-GG CGG CCAGCCAGC TTTTTGTCTCCGCGC Pput_0649 734897 - 735535 + | hypothetical protein Pput_0650 735532 - 735996 + | hypothetical protein Pput_0651 735998 - 736387 + | type IV pili biogenesis protein PilE Pput_0652 736442 - 737539 + | FAD dependent oxidoreductase TERM 678 737578 - 737559 - T 72 -10.7 -3.53012 | opp_overlap 737559 CTCTTCGCGGGTAAA CCCGCTC CTACGC GAGCGGG TTTACCCGCGAAAGG TERM 679 737559 - 737578 + T 72 -10.7 -3.53012 | opp_overlap 737559 CTCTTCGCGGGTAAA CCCGCTC CTACGC GAGCGGG TTTACCCGCGAAAGG Pput_0653 739093 - 737684 - | putative amidase Pput_0654 740372 - 739095 - | allantoate amidohydrolase TERM 680 739127 - 739176 + g 81 -7.7 -4.39318 | opp_overlap 739127 TGGCGGCCTGGAACA TGGCGCGCAACAGGACGTCGC AACCATCG GCCAGGTCCTGGGGCGCGGCA TTTTCGATTTCGTTG Pput_0655 741181 - 740486 - | ABC transporter related Pput_0656 741933 - 741181 - | ABC transporter related Pput_0657 742952 - 741933 - | inner-membrane translocator TERM 681 742464 - 742449 - G 72 -2.5 -4.6955 | gap 1, opp_overlap 742457, overlap 742450 742451 GACGAACACATAAAA GTGCCG TGGGT CGGC-C AGGTCGACCAGCACA TERM 682 742918 - 742938 + g 74 -2.4 -4.88736 | AGCGCCGGGGCGCGG CCCTTGGC GACTG GCAATGGG TTTTTCTCGCTCATC Pput_0658 743814 - 742954 - | inner-membrane translocator TERM 683 743273 - 743259 - G 76 -8.6 -4.14874 | opp_overlap 743272 AGAACAGGCGGAAAA TGTTGG TGC CCAACA GCGACACGGTCTCGG TERM 684 743701 - 743689 - G 86 -4.7 -5.1356 | overlap 743690 743691 GCCCAGCAAGAAAAA CGCGC CGT GGGCG AAGTTGACGAAGTTG Pput_0659 745082 - 743880 - | branched chain amino acid ABC transporter amino acid-binding protein TERM 685 745143 - 745158 + r 70 -10.4 -3.34517 | overlap 745142 AAGCGGGTACGGCCG GGCCTG TGTG CAGGCC TCTTTACAGGCGCAT Pput_0660 745952 - 745173 - | regulatory protein GntR, HTH TERM 686 746109 - 746080 - R 74 -3.3 -4.98522 | overlap 746082 746107 AATTGCAGATAAAAA CTGTGGGAGCGGG CGTG CCCGCGAACACCG GCGAAGCCGGTGCCA Pput_0661 746434 - 746204 - | hypothetical protein TERM 687 746507 - 746491 - R 100 -13.7 -5.60993 | opp_overlap 746491 GCGGCCATAAAAAAA GGGAGGC CTG GCCTCCC TTTCATTTACCGCTG TERM 688 746491 - 746507 + r 95 -13.7 -4.06502 | opp_overlap 746491 GCGGCCATAAAAAAA GGGAGGC CTG GCCTCCC TTTCATTTACCGCTG Pput_0662 747546 - 746527 - | DNA uptake lipoprotein-like protein TERM 689 747121 - 747147 + g 71 -9.2 -3.81951 | GGCGAACTCGTTGTA CGAGTCGCGGGC GGC GCCCGGGTCACG TTTGGTCATGTCCAA Pput_0663 747598 - 748656 + | RluA family pseudouridine synthase TERM 690 749337 - 749359 + G 72 -7.7 -4.24294 | gap 1 CGGTTCTTCTCCTAT CGCCGTACCC CGCA GGGTG-GGCG TTTTGCATCGTTGGT Pput_0664 748653 - 749393 + | hypothetical protein TERM 691 750021 - 750000 - g 71 -5.9 -4.2828 | gap 1, overlap 750006 CGCCATGGACGAAAA CAGCAAGCTC GGC AAGC-TGCTG CTGAGCCAAGGCGTG TERM 692 750637 - 750619 - g 72 -4.4 -4.66609 | opp_overlap 750621, overlap 750621 CAGTTCATCGAAAAA GACGCCGC CCT GGAGCGCC GTTTCCAGAAAGTGC Pput_0665 749644 - 752208 + | ATPase TERM 693 752225 - 752242 + T 100 -14.1 -5.30686 | TGTGTTGCACCATGA GCCCCGC GTTT GCGGGGC TTTTTTCTGCCTGTT TERM 694 752271 - 752294 + T 71 -4.5 -4.59109 | TTGCCCATGCCGGCC TCTTCGCGG CCAACC CTGCGCAGA TTTTTGCAGGCTATG TERM 695 752522 - 752501 - T 71 -7.4 -4.14739 | opp_overlap 752504, overlap 752504 TCAGTGATCGCAAAA CAACTTAC AAATCA GTAAGTTG AATGAAAAAAAGTGG TERM 696 752920 - 752900 - T 100 -15.5 -4.43844 | opp_overlap 752900 CCACCATGTAGAAAA GGGCATCTC AAA GAGATGCCC TTTTTTTTGAAACAC TERM 697 752900 - 752920 + T 100 -15.5 -5.75342 | opp_overlap 752900 CCACCATGTAGAAAA GGGCATCTC AAA GAGATGCCC TTTTTTTTGAAACAC TERM 698 753096 - 753130 + T 100 -15.3 -4.18018 | gap 1, opp_overlap 753103, overlap 753103 TACACGACCCACCAT GAACAAAGGGCATCTC GCAT GAGATGCCCTTT-TTC TTTTGCCTCGAAAAA TERM 699 753103 - 753124 + T 100 -14.5 -5.48213 | opp_overlap 753103, overlap 753096 CCCACCATGAACAAA GGGCATCTC GCAT GAGATGCCC TTTTTCTTTTGCCTC TERM 700 753124 - 753103 - T 100 -14.5 -4.2704 | opp_overlap 753103 753096 CCCACCATGAACAAA GGGCATCTC GCAT GAGATGCCC TTTTTCTTTTGCCTC TERM 701 753161 - 753146 - T 71 -4.6 -4.56597 | TTTTGCCTCGAAAAA TGCGCC CATC GGTGCA AATCCCACCTGCATC Pput_0666 754582 - 753287 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pput_0667 754840 - 754667 - | hypothetical protein Pput_0668 755602 - 754973 - | hypothetical protein TERM 702 755408 - 755396 - G 80 -5.5 -4.77036 | overlap 755398 GTCGAGCACGAAAAA CACCT CGA AGGCG GCGTCGCGGAACAGC Pput_0669 756089 - 755658 - | hypothetical protein Pput_0670 756095 - 756883 + | hypothetical protein TERM 703 756971 - 756955 - T 82 -13.7 -3.53012 | CCTTGTGTCGCGAAA GGGCTGC GAA GCAGCCC CAGATTCGGTGGTAA TERM 704 757022 - 756996 - T 75 -2 -5.15969 | opp_overlap 757001, overlap 756997 TGGTAACTCAAAAAA TGCCGGGGCTGC TTC GCAGCCCTTTCG CGACACAAGGCTCCC TERM 705 757001 - 757017 + T 82 -13.7 -3.53012 | opp_overlap 756997 756996 ACTCAAAAAATGCCG GGGCTGC TTC GCAGCCC TTTCGCGACACAAGG Pput_0671 757268 - 757068 - | zinc-binding protein coaE 757888 - 757265 - | dephospho-CoA kinase TERM 706 757798 - 757756 - G 74 -12.7 -3.30441 | gap 1, overlap 757760 GACCAGGTTCGACAA CCCAGCGCGCCGCCTGGTCG GCAT CGACCAGGTG-CACGCCAAG CTCGACAAAGCGCTC TERM 707 757794 - 757760 - G 74 -14.3 -2.5955 | gap 1, overlap 757756 AGGTTCGACAACCCA GCGCGCCGCCTGGTCG GCAT CGACCAGGTG-CACGC CAAGCTCGACAAAGC TERM 708 757845 - 757808 - G 71 -8.5 -3.89614 | gap 2, opp_overlap 757808 GCCAAGCTCGACAAA GC-GC-TCGGCAGCGGC GCTTTT GCCGCTACCAATGCCGC CGGTCAGGCCGAGAA Pput_0673 758754 - 757888 - | prepilin peptidase Pput_0674 759965 - 758757 - | type II secretion system protein TERM 709 759758 - 759780 + g 78 -9.9 -4.0896 | gap 1 ACGTCGCCAACTGCC GGCTGAACCC CGCC GGGT-CAGCC TTTTGGCGCCGCTTT Pput_0675 760182 - 760592 + | fimbrial protein pilin TERM 710 760787 - 760803 + F 100 -10.8 -5.45652 | opp_overlap 760787 CTGGCACCAATAGAA GCCCGC CTTGT GCGGGC TTTTTTGTTCCCGCT TERM 711 760803 - 760787 - f 77 -10.8 -3.71284 | opp_overlap 760787 CTGGCACCAATAGAA GCCCGC CTTGT GCGGGC TTTTTTGTTCCCGCT TERM 712 760827 - 760840 + F 72 -3.8 -4.84529 | TCCCGCTTTTTTCCC CACG GATTTG CGTG TTTTTGACTTTATGG TERM 713 761086 - 761117 + G 74 -2.2 -4.94058 | gap 1, overlap 761087 CGAGTTTCTGCGCAG GCTGAGGCTGGAAGG GGA CACTCCA-CCTCAGG TTTTCTTTCAGTTGA Pput_0676 760961 - 762145 + | filamentation induced by cAMP protein Fic TERM 714 762286 - 762270 - f 88 -15.1 -3.53012 | CCTTGTGTCGCGAAA GGGCCGC AAC GCGGCCC GGCAATTCTTGCGCC TERM 715 762499 - 762469 - f 86 -11 -4.14392 | GCTCAATTTCTAAAA GCTAGCGCGATCCC TGT GGGAGCGGGCAAGC CCGCGAAGGGCTGCA TERM 716 762744 - 762714 - f 86 -11 -4.14392 | GCTCAACTTCTAAAA GCTAGCGCGATCCC TGT GGGAGCGGGCAAGC CCGCGAAGGGCTGCA Pput_0680 764563 - 765465 + | hypothetical protein Pput_0681 765462 - 766094 + | hypothetical protein TERM 717 766247 - 766264 + F 79 -7.1 -4.83169 | opp_overlap 766247 TGACAGATTAATTTA TAGCTAA ATTT TTAGCTA TTTTTGTAAAGGACT Pput_0682 766285 - 767151 + | hypothetical protein TERM 718 767707 - 767686 - T 77 -11.6 -3.64703 | TGCTCTCGACCCAAA GCTGCCCT CGGCGT AGGGCAGC AAACCGCTATGAGCA Pput_0683 768822 - 768040 - | hypothetical protein TERM 719 768937 - 768882 - H 100 -16.6 -4.14243 | gap 1, opp_overlap 768901 768930, overlap 768901 CAGTTGATGTGAAAA TTGAATCCAG-ATGCCAAAATAATCTC TAT GAAATTACTTTGGCATGCCGGATTCGA ACCGAGACCTTTCCA TERM 720 769254 - 769278 + H 73 -8.5 -4.08706 | ACAATGGGTCGGATA GCGACGGCC TGACTTC GACCGTCGC TTTGTGTAGTCAAAA TERM 721 769862 - 769875 + H 74 -6.7 -4.36366 | opp_overlap 769861 769862 GAACATTTTCCAAAT GGCAA CATA TTGCC TTTGTGTATTTTGTC TERM 722 770149 - 770164 + H 91 -4.6 -5.50499 | overlap 770150 770152 GCACTAGGCGCCCCT GCACCA CAGC TGGCGC TTTTTTTGCGTCTGC Pput_0684 770447 - 770674 + | hypothetical protein TERM 723 770705 - 770727 + T 71 -11.2 -3.07994 | GAGGGTGGGGCCAGA TTGGGGCTGC TGC GCAGCCCCCG TTGACTCGAGTTCAA Pput_0685 772124 - 770739 - | gluconate transporter Pput_0686 772403 - 772125 - | hypothetical protein Pput_0687 772558 - 773487 + | lactate/malate dehydrogenase Pput_0689 773862 - 774221 + | hypothetical protein Pput_0690 775104 - 774283 - | polar amino acid ABC transporter, inner membrane subunit Pput_0691 775922 - 775101 - | extracellular solute-binding protein TERM 724 775191 - 775211 + g 72 -3.8 -4.67353 | CACCTGGCGTACCTT GGCATCCC ACTCA GGGTCGCC TTTTTCGATGGCTAC TERM 725 776606 - 776632 + G 71 -10.8 -3.40611 | opp_overlap 776605, overlap 776604 776628 CCGACGCCATCGAAG CTGCAGTCAGCC TGG GGGTGGCTGCGG TGTTGTTCAACTGCA Pput_0692 775990 - 776925 + | homocysteine S-methyltransferase Pput_0693 777093 - 778364 + | cystathionine gamma-synthase TERM 726 778374 - 778402 + F 71 -11 -3.16564 | GCCTGAGGCTGGCGC GTAGCACTCACC CGTGC GGTGGGTGCCAC TTCATGAAGTCGAAC Pput_0694 778507 - 779946 + | amino acid permease-associated region TERM 727 780828 - 780872 + G 75 -12.2 -3.54676 | gap 2 TGAAGCGTTGTCCCC CGATGC-CCA-GGCGTTCAGCC ATT GGCTGGTGGCCATGGCGCATCG TTAATTTACGTAGCT Pput_0695 779992 - 780876 + | LysR family transcriptional regulator TERM 728 781245 - 781262 + G 71 -5.5 -4.37658 | CTCCAAGGACTTTGC CGCGC AGTTGCAG GCGCG TTTTGTCCGGCACTT Pput_0696 780901 - 782289 + | threonine synthase Pput_0697 782286 - 782723 + | AsnC family transcriptional regulator TERM 729 782744 - 782785 + F 100 -26.7 -4.13767 | opp_overlap 782751, overlap 782745 GTCTTTGCATTGGCT AGCACAACGCCGCCTGGGT TCGC GCCCAGGCGGCGTTGTGCG TTTTGCCCTGGCGCA TERM 730 782745 - 782784 + F 100 -30.2 -3.08046 | opp_overlap 782751, overlap 782744 TCTTTGCATTGGCTA GCACAACGCCGCCTGGGT TCGC GCCCAGGCGGCGTTGTGC GTTTTGCCCTGGCGC TERM 731 782778 - 782751 - f 100 -19.9 -3.4072 | opp_overlap 782745 782744 CATTGGCTAGCACAA CGCCGCCTGGG TTCGCG CCCAGGCGGCG TTGTGCGTTTTGCCC TERM 732 783420 - 783378 - g 77 -14.1 -3.36273 | gap 1, opp_overlap 783405 TCGTTCGAATACGAA GGCGCCGTCATGAGCGGCAC ACCG GTGCTGCGCATGGCG-CGCC AGACCCTGGCGGGCG Pput_0698 782922 - 783965 + | homoserine dehydrogenase Pput_0699 783978 - 785396 + | aldehyde dehydrogenase Pput_0700 785413 - 785760 + | endoribonuclease L-PSP Pput_0701 786742 - 785789 - | bile acid:sodium symporter TERM 733 787018 - 786976 - R 100 -16.5 -4.27211 | opp_overlap 786988, overlap 786981 786982 786988 GTGAAACAAACGAAA TCAAACGAAAAAGCCCGGC ACTGG GCCGGGCTTTTTCACTTCA GGCAAGCGCCAATCA TERM 734 787013 - 786981 - R 100 -18.6 -4.18782 | opp_overlap 786988, overlap 786976 786982 786988 ACAAACGAAATCAAA CGAAAAAGCCCGGC ACTGG GCCGGGCTTTTTCA CTTCAGGCAAGCGCC TERM 735 787012 - 786982 - R 100 -19.9 -3.09643 | opp_overlap 786988, overlap 786981 786976 786988 CAAACGAAATCAAAC GAAAAAGCCCGGC ACTGG GCCGGGCTTTTTC ACTTCAGGCAAGCGC TERM 736 786988 - 787006 + r 100 -13.1 -4.74103 | opp_overlap 786982 786981 786976 786988 AAATCAAACGAAAAA GCCCGGC ACTGG GCCGGGC TTTTTCACTTCAGGC TERM 737 787006 - 786988 - R 100 -13.1 -5.05577 | opp_overlap 786988, overlap 786982 786981 786976 AAATCAAACGAAAAA GCCCGGC ACTGG GCCGGGC TTTTTCACTTCAGGC glyA 788284 - 787031 - | serine hydroxymethyltransferase TERM 738 788426 - 788443 + r 70 -3.3 -4.84017 | TGGGCGGGGGCAGGA GTTGACC TGGA GGTCCGC TTTTTATGCAGGATT TERM 739 788564 - 788550 - R 75 -11.4 -3.53012 | GTGTTCGCGGGTAAA CCCGGT CCT ACCGGG ACCTTGCGAGCAGGC Pput_0703 792420 - 788590 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 740 789012 - 789023 + g 72 -7.2 -4.16284 | overlap 789002 GTTCCAGGCATGCCG GCGG CAGG CCGC TTTCTTCCAGAATGT Pput_0704 792642 - 793067 + | hypothetical protein Pput_0705 793370 - 795037 + | putative ABC transporter ATP-binding protein TERM 741 795061 - 795080 + F 100 -15 -4.87665 | opp_overlap 795061 TCTGATGCACAAGAA TGGGGCCC CAAT GGGCCCCA TTTTTGTGCCTGGCG TERM 742 795080 - 795061 - f 95 -15 -3.8211 | opp_overlap 795061 TCTGATGCACAAGAA TGGGGCCC CAAT GGGCCCCA TTTTTGTGCCTGGCG TERM 743 796128 - 796114 - g 72 -4.2 -4.62783 | GATGGAGCTGAAAAA CGTCAA GCG TGGACG TATCAGCGAGCTGGC Pput_0706 795260 - 796600 + | glutamate dehydrogenase Pput_0707 797297 - 796800 - | GreA/GreB family elongation factor TERM 744 797234 - 797267 + g 76 -13.2 -3.42147 | GCTGTTCGCTGATGC GCCGCTCGACC-GGCT GGTC GGCCTGGTCG-GCGGC TTGGTCTTCGTTGAC Pput_0708 797721 - 797365 - | hypothetical protein TERM 745 797517 - 797548 + g 72 -4.5 -4.58283 | gap 1 CGTCCCAGCCGGTTT CGTACTGACGCT CGTGCAGGT AGCG-CGGTACG TTTTTGCGAAAGTTG TERM 746 797936 - 797922 - R 79 -12.8 -3.53012 | overlap 797931 GGCGTGCCCGCGAAA GGCCGC AAA GCGGCC TCAGTAGTGATACCA Pput_0709 799790 - 797937 - | hypothetical protein TERM 747 799836 - 799824 - R 76 -6.9 -4.60487 | opp_overlap 799825, overlap 799831 GACGATGCCGAAAAA GGCGA AAC CCGCC CCGGGTGGGGCGGGA TERM 748 799850 - 799831 - R 100 -16.4 -3.8046 | opp_overlap 799825, overlap 799824 CCGAAAAAGGCGAAA CCCGCCCC GGGT GGGGCGGG AGCAGCTGTGCTTAG Pput_0710 800350 - 799862 - | hypothetical protein Pput_0711 800600 - 803038 + | ATP-dependent protease-like protein Pput_0712 803201 - 803539 + | hypothetical protein Pput_0713 803729 - 804217 + | hypothetical protein Pput_0714 804435 - 804740 + | hypothetical protein Pput_0715 804826 - 805443 + | peptidylprolyl isomerase, FKBP-type TERM 749 805419 - 805435 + T 79 -12.3 -3.54951 | CGTACTGGTGTTCGA CGTCGAG CTG CTCGACG TTCTGTAATGCCCTA TERM 750 805453 - 805469 + T 80 -15.1 -2.54702 | overlap 805443 CTGTAATGCCCTAGA GGCCGGC CCT GCCGGCC TCAATTCCAGTCTGT Pput_0716 805715 - 805470 - | hypothetical protein Pput_0717 806141 - 805800 - | alkylphosphonate utilization operon protein PhnA TERM 751 806285 - 806228 - R 100 -25.8 -4.83169 | gap 1, overlap 806229 806231 ATGTCCGGACAAAAA GCA-TCGCGGGCAAGCCGGCTCCCACA AATGG TGTAGGAGCGGGCTTGCCCGCGAATGA AGGCGACTCGGTCTG TERM 752 806284 - 806229 - R 100 -29.3 -3.49419 | gap 1, overlap 806228 806231 TGTCCGGACAAAAAG CA-TCGCGGGCAAGCCGGCTCCCACA AATGG TGTAGGAGCGGGCTTGCCCGCGAATG AAGGCGACTCGGTCT TERM 753 806281 - 806231 - R 100 -32.1 -3.31915 | overlap 806229 806228 TCCGGACAAAAAGCA TCGCGGGCAAGCCGGCTCCCACA AATGG TGTAGGAGCGGGCTTGCCCGCGA ATGAAGGCGACTCGG Pput_0718 807269 - 806301 - | polyprenyl synthetase Pput_0719 807296 - 807529 + | hypothetical protein TERM 754 807615 - 807589 - g 73 -2.8 -4.74706 | opp_overlap 807612, overlap 807581 807591 CTCAAGATCGAAAAA CTGGAAGTCGCC ACT GGCGAATCCGTG ACCTTCGATCGCGTT rplU 807514 - 807828 + | 50S ribosomal protein L21 rpmA 807867 - 808124 + | 50S ribosomal protein L27 TERM 755 808144 - 808163 + F 100 -15 -5.05505 | opp_overlap 808144 GACGTCGCTCCAGAA GCCCCGTC ATGC GACGGGGC TTTTTCGTTTGTGGT TERM 756 808163 - 808144 - f 86 -15 -3.28924 | opp_overlap 808144 GACGTCGCTCCAGAA GCCCCGTC ATGC GACGGGGC TTTTTCGTTTGTGGT obgE 808313 - 809539 + | GTPase ObgE TERM 757 809559 - 809578 + F 100 -15 -4.96848 | opp_overlap 809559 TTGCAGTACACTAAA CGCCGCTC TCTG GAGCGGCG TTTTTGTATCCACGG TERM 758 809578 - 809559 - f 95 -15 -3.86202 | opp_overlap 809559 TTGCAGTACACTAAA CGCCGCTC TCTG GAGCGGCG TTTTTGTATCCACGG Pput_0723 809625 - 810743 + | gamma-glutamyl kinase Pput_0724 810740 - 811201 + | CreA family protein Pput_0725 814254 - 811459 - | hypothetical protein Pput_0726 814994 - 814287 - | hypothetical protein TERM 759 814571 - 814585 + g 100 -4.2 -5.45652 | CGAAGCCGAGTTGGG TCATGC GCC GCAGGA TTTTTTCTTCCAGCT Pput_0727 816318 - 814984 - | hypothetical protein TERM 760 815119 - 815131 + g 76 -9.1 -4.07568 | GCGGTCGAGGCGTTC GCGCT TGA AGCGC TTTTCCCGCGACAGG TERM 761 815808 - 815848 + g 86 -8.9 -4.57569 | TGCTGGTCTTGGCCC GTTCGGCCACGGCCACCAG TGC CTGCTCGTCGTTGTCGAGC TTTTTCAGCACATCG Pput_0728 816705 - 817490 + | hypothetical protein TERM 762 817734 - 817717 - g 73 -6.9 -4.28049 | overlap 817721 CGTAAAACCGGAAAA CCAAGGC TGCG GCCTGGG CCTGCGCCTACTCGA Pput_0729 817487 - 817942 + | ribosomal-protein-alanine acetyltransferase TERM 763 818102 - 818090 - gT 74 -4.8 -4.64157 | TAAAGAATGAGAAAA CTGC TTTTG GCAG CGGGCTTGTGTTTAG TERM 764 818166 - 818190 + GT 72 -10 -3.6608 | GGATGTTCGCCCAGT GGGCGGGT GATCATCAA ACCCGCCC TTTCCGTGAAATGCT Pput_0731 819513 - 818596 - | LysR family transcriptional regulator Pput_0730 818081 - 818656 + | peptidase M15A TERM 765 819593 - 819554 - fH 75 -11.6 -3.53012 | gap 1, opp_overlap 819554 CTCTTCGCGGGTAAA CCCGCTCCTACATGG CCACATATTCT CC-TGTAGGAGCGGG TTTACCCGCGAAGAG TERM 766 819554 - 819593 + FH 75 -11.6 -3.53012 | gap 1, opp_overlap 819554 CTCTTCGCGGGTAAA CCCGCTCCTACATGG CCACATATTCT CC-TGTAGGAGCGGG TTTACCCGCGAAGAG Pput_0732 819741 - 820355 + | lysine exporter protein LysE/YggA TERM 767 820392 - 820369 - T 73 -13.2 -2.66634 | gap 1, overlap 820366 GAGGCGACGATAGCA GCGCCGAAACC TGT GGTT-CGGCGC CCGGCTGCTGCTGGA TERM 768 820447 - 820480 + T 89 -12.5 -4.015 | opp_overlap 820431 820447 820453, overlap 820453 TTTTTCGCAGGCAAA GAAAAAGGGCTTACC TTGC GGTAAGCCCTTCGTC TTGTTTGGTGGCTAC TERM 769 820480 - 820447 - T 86 -14.7 -3.64703 | opp_overlap 820447 820453, overlap 820431 820453 TTTTTCGCAGGCAAA GAAAAAGGGCTTACC TTGC GGTAAGCCCTTCGTC TTGTTTGGTGGCTAC TERM 770 820474 - 820453 - T 100 -14.5 -5.30616 | opp_overlap 820447 820453, overlap 820447 GCAGGCAAAGAAAAA GGGCTTACC TTGC GGTAAGCCC TTCGTCTTGTTTGGT TERM 771 820453 - 820474 + T 85 -14.5 -3.51158 | opp_overlap 820453 820447, overlap 820447 GCAGGCAAAGAAAAA GGGCTTACC TTGC GGTAAGCCC TTCGTCTTGTTTGGT Pput_0733 821644 - 820658 - | anti-FecI sigma factor, FecR TERM 772 821464 - 821496 + g 74 -10.5 -3.72576 | opp_overlap 821483 821484, overlap 821484 GGGCGTTCTCTTGTA CCTGGCACCAGGC TGCAAAT GCCTGGCGCTGGG TTTCGTCGCAACCGG TERM 773 821832 - 821854 + G 76 -9.9 -3.89614 | opp_overlap 821826 GCAAGCCAAGCCTCG CCGATGGTG ATGCG CATCATCGG TTTCTGCGCCTTGGC Pput_0734 821775 - 822989 + | major facilitator transporter TERM 774 823039 - 823060 + F 91 -9.4 -5.09225 | opp_overlap 823028 TTGACGAGCCCCCCG GAGGTGGC TAGAGT GCCGCCTC TTTTTTCAATCACCT TERM 775 823245 - 823277 + F 71 -8.4 -3.89903 | overlap 823246 823247 AACGGATCTGCGCTT TA-GCGTCGCTCGCCG TCT CGGCGTGCG-CGCCTG TTTCTGCACGTCTTT TERM 776 823246 - 823275 + F 75 -11.3 -3.53174 | gap 1, overlap 823245 823247 ACGGATCTGCGCTTT AGCGTCGCTCGCCG TCT CGGCGTGCG-CGCC TGTTTCTGCACGTCT TERM 777 823247 - 823274 + F 80 -14.8 -2.71422 | gap 1, overlap 823246 823245 CGGATCTGCGCTTTA GCGTCGCTCGCCG TCT CGGCGTGCG-CGC CTGTTTCTGCACGTC TERM 778 823988 - 824024 + G 70 -11.6 -3.21416 | gap 2, overlap 823967 GCTGCTGCCGGTGTA CGCCACCA-GCC-ATGGC TTT GCCGTTGGCGTGGCGGCG TTGATGGTGACGGTG TERM 779 824342 - 824374 + G 70 -9.8 -3.57263 | gap 1 GGTCGGGCCGCTGGT CAGTGGGGCG-GCCA TGAA TGTCGCGCCCCACGG TTTGCCCATGGCGCT Pput_0735 823314 - 824471 + | major facilitator transporter Pput_0736 825435 - 824479 - | anti-FecI sigma factor, FecR Pput_0737 825937 - 825422 - | ECF subfamily RNA polymerase sigma-24 factor TERM 780 826670 - 826696 + G 74 -10 -3.74693 | opp_overlap 826669 ACACCGGCGCAAATG CGTTCGCTGGGC GGC GCCTGGCGGCCG TTTCGTACCGTGGCG Pput_0738 826112 - 826735 + | DNA-3-methyladenine glycosylase II Pput_0739 826783 - 827835 + | methylated-DNA--protein-cysteine methyltransferase TERM 781 828303 - 828290 - g 75 -3.1 -4.84359 | gap 1, overlap 828291 828292 GGAGGCCGAGAAAAA GGCGCT GGT AGC-CC AGCAGGATCAGGCCA TERM 782 829633 - 829660 + G 76 -9.8 -3.95022 | overlap 829635 829637 829637 CCGGTATGCGGGCCT CGCTGGTAACCC TGGT GGGTTACCTGGG TTTCCTGTTCCTGGC Pput_0740 827892 - 830303 + | MscS mechanosensitive ion channel Pput_0741 831547 - 830330 - | Egg lysin (Sperm-lysin) TERM 783 831845 - 831807 - R 100 -20.5 -3.53444 | gap 1 GTATTCGCGGGTAAA CCCGCTCCTACATACAGC ACAG GCCGT-TGTAGGAGCGGG TTCACCCGCGAACAC Pput_0742 833557 - 832127 - | aldehyde dehydrogenase Pput_0743 835070 - 833571 - | permease for cytosine/purine, uracil, thiamine, allantoin TERM 784 834757 - 834735 - G 77 -4 -4.89852 | overlap 834736 834737 CGAGAGTGAGAAAAA CGCCACCGCC GTG AGCAGCGACA GGAACGAGCCGACGA TERM 785 835096 - 835116 + r 89 -8.1 -4.87665 | overlap 835097 CAGCGCGGTTGTTGT AGCCAGCGC AGT GCGCGGGCC TTTTTGTGGGTGCGA TERM 786 835097 - 835115 + r 75 -11.6 -3.52117 | overlap 835096 AGCGCGGTTGTTGTA GCCAGCGC AGT GCGCGGGC CTTTTTGTGGGTGCG Pput_0744 835672 - 835163 - | hypothetical protein Pput_0745 835764 - 836384 + | isochorismatase hydrolase TERM 787 836538 - 836524 - g 78 -3.5 -5.01732 | overlap 836527 AAGCCCTTCAAAAAA CAGCC AGAAA AGCTG GGCGGTAAGGCGTAC Pput_0746 836491 - 837306 + | hypothetical protein Pput_0747 837343 - 838539 + | potassium efflux system protein TERM 788 839043 - 839083 + G 76 -9.5 -4.08823 | CAGATCAAGGGGGCC GGGCTAACGGTGCTGGGCG CTG CGGCCAGCGCCGGTGGGGC TTTCCTTCTGTTCAT Pput_0748 838581 - 839678 + | hypothetical protein TERM 789 839789 - 839759 - g 79 -8.2 -4.30576 | CCCGGATTATGAAAA GCCCCAAACGCC GTGGTTG GGCGGCTGGAGC ACGCCAATGCTGGAG Pput_0749 839682 - 841196 + | RND efflux system outer membrane lipoprotein Pput_0750 841193 - 842290 + | secretion protein HlyD family protein Pput_0751 842280 - 843302 + | hypothetical protein Pput_0752 845034 - 843322 - | sulfate transporter TERM 790 843687 - 843646 - G 78 -10 -4.08557 | GTTGGCAAAGAACAA CGGCGCGTCCCAGCGCAG CAGCAC CAGCCCTGGAATACGCCG GGCCTGTGGATAACG TERM 791 844232 - 844206 - G 74 -14.5 -2.63102 | opp_overlap 844195, overlap 844195 844208 844230 AGGAGCGTGACAGCA CACTGGTGTCG GCGAA CGACACCAGCG CCACTGCAATCCCGC TERM 792 844230 - 844208 - G 74 -13.5 -2.85668 | overlap 844206 GAGCGTGACAGCACA CTGGTGTCG GCGAA CGACACCAG CGCCACTGCAATCCC TERM 793 845086 - 845096 + r 71 -8.2 -3.87869 | opp_overlap 845056, overlap 845083 GCTTAGATGCTGGGG GCGG GGC CCGC TTTGTGGCCCGTTGC TERM 794 845159 - 845184 + r 95 -13.3 -4.1523 | opp_overlap 845159 CCGGGCAAAACAAAA CCCCTTGAAGC GCAA GCCTCAAGGGG TTTGTGTGTGCTGCA TERM 795 845184 - 845159 - R 100 -15.5 -5.07652 | opp_overlap 845159 CCGGGCAAAACAAAA CCCCTTGAAGC GCAA GCCTCAAGGGG TTTGTGTGTGCTGCA Pput_0753 846309 - 845209 - | translation-associated GTPase Pput_0754 846918 - 846334 - | peptidyl-tRNA hydrolase TERM 796 846742 - 846784 + g 74 -2.7 -4.83615 | gap 1, opp_overlap 846733, overlap 846744 846745 GATCAACAAACGAAC GTCGTT-GCCCTGATGGCTG AATT TAGCCGTCAGGCCGAAATAC TTTTTGTCAGCGGTC Pput_0755 847591 - 846998 - | 50S ribosomal protein L25/general stress protein Ctc TERM 797 847685 - 847656 - R 100 -25.1 -5.0538 | GGGGATGGCAAAAAA GCCCCGCCCCAAC ACAG GTTGGGGCGGGGC GCTTCACATCAACAC Pput_0756 848642 - 847710 - | ribose-phosphate pyrophosphokinase ipk 849655 - 848795 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 850277 - 849660 - | outer membrane lipoprotein LolB TERM 798 849902 - 849947 + g 70 -11.8 -3.14344 | opp_overlap 849896, overlap 849899 849906 849909 849937 GGTGCGAAACCGGCA GTTGCCAGCCCAGTTGCTCT TCCAGC AGGGCTTCTGGGCTGGTGGC TTCGTAGCGGCCCTG TERM 799 849906 - 849943 + g 71 -13.4 -2.56596 | opp_overlap 849896, overlap 849899 849902 849909 849937 CGAAACCGGCAGTTG CCAGCCCAGTTGCTCT TCCAGC AGGGCTTCTGGGCTGG TGGCTTCGTAGCGGC TERM 800 850232 - 850218 - G 71 -12.8 -3.05384 | CTCGCGGCTACCGAA GCCGGC ACA GCCGGC CAGCAGGGCGATCAT Pput_0759 852003 - 850282 - | TPR repeat-containing protein TERM 801 850646 - 850674 + g 73 -2.9 -4.71061 | GCCATGGCGTTTTCT GGCTCGCGGGCGA TGA TGGCGCGCAGGTC TTTTTCCATCTGCGT TERM 802 854660 - 854629 - g 73 -7.1 -4.38712 | overlap 854637 TGTAGTGGCAGAAAA CCTCAAGAGCCGC CAGGGT GCGGCTCAGGCGG CCGAAGAGCTGGTAT TERM 803 854908 - 854893 - g 74 -4.6 -4.62069 | opp_overlap 854899 CGTGCAGCTGAAAAA GCTCTC GGCC GAGGGC CGCCTTGATGCGCTG hemA 853706 - 854983 + | glutamyl-tRNA reductase prfA 854980 - 856062 + | peptide chain release factor 1 Pput_0762 856062 - 856892 + | HemK family modification methylase Pput_0763 856886 - 857641 + | molybdopterin biosynthesis protein MoeB Pput_0764 857634 - 858431 + | glutamate racemase TERM 804 858558 - 858573 + F 93 -10.4 -4.64861 | overlap 858560 GAAACTGCTCGGCTT GGCAGC GGCT GCTGCC TTTGTTTTGGGGCAA Pput_0765 858592 - 859056 + | hypothetical protein Pput_0766 859809 - 859180 - | hypothetical protein Pput_0767 861317 - 859890 - | deoxyribodipyrimidine photo-lyase TERM 805 860141 - 860125 - G 71 -13.7 -2.67058 | overlap 860124 860122 AAGATACGGAAATAG GGCACCG CAT CGGTGCC GGTGGACGCACTCCA TERM 806 860969 - 861000 + g 75 -14.4 -2.78547 | overlap 860966 TGGCCGACTTTTCCA GCAGTGCCCGGGTG GCAT CATCCCGGCGCTGC TCATTGATGCCGTAC Pput_0768 862207 - 861308 - | MerR family transcriptional regulator TERM 807 861949 - 861982 + g 76 -10.2 -3.86015 | GCTGGAATTGCCTGG CTTGCCAGTCCCCC TTCGGT GGGGTGCTGGCGGG TTTGTCGAGCAACTC Pput_0769 863165 - 862197 - | hypothetical protein Pput_0770 864255 - 863269 - | NAD/FAD-dependent oxidoreductase-like protein TERM 808 864227 - 864215 - G 76 -10.5 -3.85698 | TGGGCGGCTGACAAA CCGGC GAT GCCGG CCCCGATGATAGCGA TERM 809 864947 - 864961 + G 75 -3.5 -4.83615 | gap 1, overlap 864946 ACTGGCCTGGTGCTG GCCAGC GATG GC-GGC TTTTTGTCGCGCCTG TERM 810 865176 - 865201 + G 73 -12.5 -3.21099 | overlap 865164 865177 GCCGCGCCCTGCATC GGCCGGCGCTG TTGC CAGTGCCGGCA TTGCTGCTCAAGGCC TERM 811 865177 - 865200 + G 79 -16 -2.52516 | overlap 865164 865176 CCGCGCCCTGCATCG GCCGGCGCTG TTGC CAGTGCCGGC ATTGCTGCTCAAGGC Pput_0771 864443 - 865348 + | NAD-dependent epimerase/dehydratase hemH 865362 - 866378 + | ferrochelatase TERM 812 866403 - 866385 - T 89 -17.4 -3.17571 | opp_overlap 866377 866376 AAGGCCTGAATCGAA GGGGCCGC CTT GCGGCCCC TACCGACCGTTTACA Pput_0773 867679 - 866414 - | uracil-xanthine permease TERM 813 866868 - 866906 + g 72 -4.2 -4.63527 | opp_overlap 866851 CCGGCTGCAGTAGTC GCCAGGCCGTCGCCCAGC AAT GTCCGGTGCAGGCCAGGC TTTTTCAGGTAGTCA upp 868320 - 867682 - | uracil phosphoribosyltransferase Pput_0775 868483 - 869040 + | hypoxanthine-guanine phosphoribosyltransferase Pput_0776 869043 - 869516 + | hypothetical protein Pput_0777 869568 - 870038 + | hypothetical protein Pput_0778 870107 - 870397 + | hypothetical protein TERM 814 870542 - 870529 - T 100 -9.5 -5.64274 | opp_overlap 870529 CCAGGCACAAAAAAA CGCCC CGAG GGGCG TTTTTTCGTTAGCAG TERM 815 870529 - 870542 + T 100 -9.5 -5.26875 | opp_overlap 870529 CCAGGCACAAAAAAA CGCCC CGAG GGGCG TTTTTTCGTTAGCAG Pput_0779 872071 - 870563 - | malate:quinone oxidoreductase TERM 816 873477 - 873497 + G 77 -13.9 -3.3344 | opp_overlap 873474 TGATGTGACCAATGG CGGCCGCCG TTA CAGCGGCCG TTATGGCGCTTCGCT Pput_0780 873052 - 873636 + | hypothetical protein TERM 817 873651 - 873691 + T 100 -22.8 -3.05384 | opp_overlap 873658, overlap 873658 AGCTTCAGGTTGTGT CAGAGAACCCGCTGCCTG AGTGA CAGGCAGCGGGTTTTTTG TTGCCTGGACGGCAC TERM 818 873684 - 873658 - T 100 -19.5 -3.48276 | opp_overlap 873658 873651 GGTTGTGTCAGAGAA CCCGCTGCCTG AGTGA CAGGCAGCGGG TTTTTTGTTGCCTGG TERM 819 873658 - 873684 + T 100 -19.5 -5.4833 | opp_overlap 873658, overlap 873651 GGTTGTGTCAGAGAA CCCGCTGCCTG AGTGA CAGGCAGCGGG TTTTTTGTTGCCTGG Pput_0781 873917 - 873711 - | hypothetical protein Pput_0782 874078 - 874338 + | hypothetical protein TERM 820 874378 - 874421 + T 79 -13.2 -3.5365 | gap 1, opp_overlap 874378, overlap 874416 CCAATCGCGACACAA GACCGCTCCCACA-AGGGTGG ACG CAATTCTCTGTGGGAGCGGCC TTGTGTCGCGTTTGG TERM 821 874421 - 874378 - T 75 -11 -3.50447 | gap 1, opp_overlap 874378 874416 CCAATCGCGACACAA GACCGCTCCCACA-AGGGTGG ACG CAATTCTCTGTGGGAGCGGCC TTGTGTCGCGTTTGG Pput_0783 875628 - 874462 - | phospholipid/glycerol acyltransferase TERM 822 874839 - 874862 + g 72 -11.7 -3.29263 | overlap 874835 TGTTGTCATCTTCGC CCGGCGCCT TCTTGT AGGTGCCGG TTGTGGCGCGGATGT Pput_0784 875754 - 875939 + | hypothetical protein Pput_0785 875939 - 876199 + | hypothetical protein Pput_0786 876215 - 876835 + | hypothetical protein TERM 823 876893 - 876931 + F 72 -9.5 -3.67052 | gap 1, opp_overlap 876907 CAATGATCGCGTTAC CCCTGCGGTAGGAACGGG CAAG CCCGCGCCTACC-CACGG TTGTGTTACCCCTGT TERM 824 876963 - 876907 - f 100 -19.5 -3.14132 | gap 1, opp_overlap 876893 CCCCTGCGGTAGGAA CGGGCAAGCCCGCGCCTACCCACGGT TGTGTT ACCCCTG-TAGGAGCGGGCTTGCCCG CGAAGAGGCCGTTAC Pput_0787 877063 - 877881 + | peptidase M48, Ste24p TERM 825 877892 - 877916 + T 95 -13.5 -4.39571 | AATAAATGCCTGAAT CCTGGGGCTGT ATG GCAGCCCCCGG TTTTCCCTTTATCCA Pput_0788 878509 - 877925 - | hypothetical protein TERM 826 878538 - 878591 + r 83 -14.7 -3.29511 | gap 1, opp_overlap 878548, overlap 878539 878540 GGGGCGGGTCGACAC GGC-TATGACACGTACAGCCTCCCCG CCC CGGGTAAGGTGTGCGTGTCATAGGTC TTGTCAAACCCTCGA TERM 827 878539 - 878589 + r 87 -16.2 -3.21593 | opp_overlap 878548, overlap 878538 878540 GGGCGGGTCGACACG GCTATGACACGTACAGCCTCCCCG CCC CGGGTAAGGTGTGCGTGTCATAGG TCTTGTCAAACCCTC TERM 828 878540 - 878588 + r 95 -19.7 -2.52742 | opp_overlap 878548, overlap 878539 878538 GGCGGGTCGACACGG CTATGACACGTACAGCCTCCCCG CCC CGGGTAAGGTGTGCGTGTCATAG GTCTTGTCAAACCCT TERM 829 878762 - 878773 + r 83 -3.6 -5.24129 | opp_overlap 878756, overlap 878756 878755 TAGGCAAAACGCTTT CGGC AAGC GCTG TTTTTTATCCGCGAG Pput_0789 879776 - 878778 - | rRNA (guanine-N(2)-)-methyltransferase Pput_0790 880796 - 879831 - | glycerate dehydrogenase Pput_0791 881090 - 882772 + | acyl-CoA synthetase TERM 830 883524 - 883544 + G 86 -12.5 -4.03234 | opp_overlap 883509 GGCGCCAAGTCGTCC GGCGCCGAG CTG CTCGACGCC TTTGTCTACCACAAC Pput_0792 883104 - 884990 + | hypothetical protein Pput_0793 885016 - 886380 + | hypothetical protein TERM 831 886415 - 886434 + F 100 -16.4 -4.36903 | opp_overlap 886415 GTCTGATCCCCAGAA CGCCCCGG CTTG CCGGGGCG TTTCTATTTCCTGAA TERM 832 886434 - 886415 - f 90 -16.4 -3.31144 | opp_overlap 886415 GTCTGATCCCCAGAA CGCCCCGG CTTG CCGGGGCG TTTCTATTTCCTGAA TERM 833 887415 - 887443 + G 71 -8.1 -3.86897 | gap 1, opp_overlap 887405, overlap 887414 GACAACCTGATCCAG CGCAGCGACGGC TGGGTC GCCGG-GCTGCG TTTCTGGCAACTGGC TERM 834 887558 - 887575 + G 71 -5.5 -4.30719 | overlap 887559 AGTCATCGATAGGCT ACCTGCA GACG TGCAGGC TTTCTTGTACGAAAC Pput_0794 886707 - 889424 + | regulatory protein, LuxR TERM 835 889457 - 889473 + F 72 -2.2 -5.00616 | opp_overlap 889459, overlap 889459 ATTGCTCGTTAAAGT GATGGC CTGAC GCCATA TTTTTTGGCCGACAA TERM 836 889540 - 889552 + F 74 -4.8 -4.7078 | opp_overlap 889527 CAGCGATCGGTGGCA TCGC CTCGC GCGA TTTTTCAATCATTCC TERM 837 890679 - 890651 - g 80 -14.5 -3.21099 | TGCGCGGATGATGAA GGCTGCCAGCCTG CAG CAGGCCGGCGACC CGGAAACGGCCGGCA TERM 838 891064 - 891037 - g 71 -12.6 -3.02144 | overlap 891020 GCATCGCCCTCAATA CCGCCCAGGCGC TGCT GCGCATCGGCGG TGACAACCCTCAGCC Pput_0795 889584 - 891191 + | response regulator receiver protein Pput_0796 891188 - 891880 + | histidine kinase TERM 839 892422 - 892432 + G 76 -6.8 -4.4078 | CAGGCCATACCCCGG GCTC GAT GAGC TTTTGGTTCGCCGAC Pput_0797 891935 - 892651 + | beta-lactamase domain-containing protein Pput_0798 892737 - 893480 + | OmpA/MotB domain-containing protein Pput_0799 895647 - 893560 - | phosphate acetyltransferase TERM 840 893786 - 893752 - G 72 -12.1 -3.36273 | gap 2, opp_overlap 893776, overlap 893755 GTCGGGGAACACGAA CACCGTGGCGCGCCCGG CCA CCGGGCTCGC--CGGCG CCAGCTCTCGTGCGA TERM 841 893786 - 893755 - G 71 -13.6 -2.54723 | gap 1, opp_overlap 893776, overlap 893752 GGGGAACACGAACAC CG-TGGCGCGCCCGG CCA CCGGGCTCGCCGGCG CCAGCTCTCGTGCGA TERM 842 895563 - 895546 - G 95 -10.5 -4.59109 | GATAGGCTTGAAAAA GCCGACC TTCA GGCCGGC ACGCTCCAAGGTGCG Pput_0800 895843 - 895679 - | hypothetical protein Pput_0801 895980 - 896465 + | peptidylprolyl isomerase, FKBP-type TERM 843 896495 - 896552 + F 100 -20.7 -4.72272 | gap 1, opp_overlap 896488 896489 CTCAGAAAGTCGCCA GGCGCTCGGGCAAGCCGATTTGCCTTCC TAC GGGAGGTGAA-CGGTTTGGACGAGCGCC TTTTTAGTGGGCGAA Pput_0802 896611 - 897093 + | peroxiredoxin TERM 844 897130 - 897155 + T 72 -10.3 -3.53444 | overlap 897131 GTGGCACCTGCGAAG CCGAGCACCGC CTGC GCGGCGCTCGC TTTCACAGGCGCTGC TERM 845 897131 - 897154 + T 75 -13.8 -2.71924 | overlap 897130 TGGCACCTGCGAAGC CGAGCACCGC CTGC GCGGCGCTCG CTTTCACAGGCGCTG Pput_0803 898348 - 897158 - | glycosyl transferase, group 1 TERM 846 899726 - 899682 - g 76 -10 -3.86981 | gap 2, overlap 899716 899720 CAGCAGAACGAACAA CTGGCGCAGGCGGCAGTGTCGA TCA TCGACAC--CAGCAAGCGCCAG GCCGAACAGGGGCTG TERM 847 899749 - 899716 - g 71 -13.8 -2.65264 | opp_overlap 899743, overlap 899682 899720 CGATCATCGACACCA GCAAGCGCCAGGCC GAACAG GGGCTGGCGCTGGC GGATGAGACGGGCAG TERM 848 899745 - 899720 - g 70 -11.8 -3.25223 | opp_overlap 899743, overlap 899682 899716 CATCGACACCAGCAA GCGCCAGGCC GAACAG GGGCTGGCGC TGGCGGATGAGACGG Pput_0804 898527 - 899843 + | methyl-accepting chemotaxis sensory transducer Pput_0805 900069 - 901406 + | hypothetical protein Pput_0806 901422 - 902045 + | GAD-like protein TERM 849 902286 - 902243 - T 79 -12.2 -3.55071 | opp_overlap 902227, overlap 902276 902277 CGATAGGGCCGCAAA GCGGCCCCAGCAATCTGTGC AGTG GCGCTGAAATCTGGGGCCGC TCTGCGGCCCTATCG Pput_0808 903092 - 902364 - | putative sulfate transport protein CysZ TERM 850 902801 - 902791 - G 73 -6.8 -4.36914 | TTTTCCGCCAGAAAA CCGT TGA ACGG CGCGGCAATGATGTT Pput_0809 903423 - 904385 + | thioredoxin reductase TERM 851 904413 - 904397 - T 90 -9.3 -4.85599 | overlap 904398 904408 CTGATCTGAGAAAAA GGGGGGC AAA GCGCCCC CAATAAAAAACCGGC TERM 852 904414 - 904398 - T 75 -11.5 -3.50877 | overlap 904397 904408 TGATCTGAGAAAAAG GGGGGCA AAG CGCCCCC AATAAAAAACCGGCC TERM 853 904414 - 904448 + T 93 -18.9 -2.85999 | opp_overlap 904408 904424, overlap 904417 904424 GGGGCAAAGCGCCCC CAATAAAAAACCGGC CAAGC GCCGGTTTTTTATTG TCTGCTATCAGCTCA TERM 854 904417 - 904445 + T 90 -14.8 -3.57651 | opp_overlap 904408 904424, overlap 904414 904424 GCAAAGCGCCCCCAA TAAAAAACCGGC CAAGC GCCGGTTTTTTA TTGTCTGCTATCAGC TERM 855 904438 - 904424 - T 95 -8.5 -5.4505 | opp_overlap 904417 904414 904424, overlap 904408 GCCCCCAATAAAAAA CCGGC CAAGC GCCGG TTTTTTATTGTCTGC TERM 856 904424 - 904438 + T 95 -8.5 -5.60689 | opp_overlap 904424 904408, overlap 904417 904414 GCCCCCAATAAAAAA CCGGC CAAGC GCCGG TTTTTTATTGTCTGC Pput_0810 905309 - 904461 - | nicotinate-nucleotide pyrophosphorylase TERM 857 904769 - 904794 + g 84 -8.9 -4.45544 | overlap 904769 904771 CGGCCACCGCCTCGG CTACGCCGCCG CTGG CGGCGATGTGG TTTTCCTTGATCAGG TERM 858 904771 - 904789 + g 70 -11.6 -3.14708 | overlap 904769 904769 GCCACCGCCTCGGCT ACGCCGCC GCT GGCGGCGA TGTGGTTTTCCTTGA TERM 859 904850 - 904863 + g 71 -8.1 -3.90048 | GATTGTCGCACCCAC CGCAG GTCA CTGCG TATTTTTGCGCCAGG Pput_0811 905553 - 907706 + | hypothetical protein Pput_0812 907795 - 908367 + | N-acetyl-anhydromuranmyl-L-alanine amidase Pput_0813 908364 - 909194 + | signaling modulator of AmpD, AmpE Pput_0814 910015 - 909239 - | TatD family hydrolase Pput_0815 911082 - 910018 - | DNA-binding transcriptional regulator FruR Pput_0816 911298 - 914150 + | phosphoenolpyruvate-protein phosphotransferase Pput_0817 914151 - 915098 + | 1-phosphofructokinase TERM 860 916058 - 916078 + G 71 -8.1 -3.92373 | ATCGGCGGCCTGTTG GCCAGCACC TTG GGGGCCGGC TTTATCGGTGGCATC TERM 861 916417 - 916462 + G 93 -18.6 -3.12351 | gap 3, overlap 916421 CTCATCGAGCTACGC GCCAAT-GGCGGCGACCATGGCC GCC GGC-ATGGT-GCCGCCGATTGGC TTGGGTATCGCCACC TERM 862 916672 - 916684 + G 76 -10.5 -3.85878 | CTGCAAGCTGATGGC GCCGC ATG GCGGC TTGTTCGTGTTGTTG Pput_0818 915095 - 916837 + | PTS system, fructose subfamily, IIC subunit TERM 863 916893 - 916877 - T 88 -15.1 -3.53012 | opp_overlap 916873 916872 916890, overlap 916887 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CGGCATTATTTGCAT TERM 864 916925 - 916941 + T 82 -13.7 -3.53012 | opp_overlap 916887, overlap 916890 GACGCTGAAATCCCG GGGCTGC TGT GCAGCCC TTTCGCGACGCAAGG Pput_0819 917253 - 917032 - | hypothetical protein Pput_0820 917455 - 917931 + | hypothetical protein Pput_0821 919418 - 917928 - | diguanylate cyclase TERM 865 918108 - 918081 - G 85 -14.8 -3.58343 | opp_overlap 918080 GGCATCATCCGCAAA CGGCGCCAGCGC CTCG ACGCTGGCGCGG ATGCGTTCAGCCAGT Pput_0822 920953 - 919619 - | outer membrane porin TERM 866 921081 - 921063 - R 100 -11.7 -5.75478 | opp_overlap 921063 AAGCACATAAAAAAA GCCGCTG ATCGG CAGCGGC TTTAAAAGGCTAACA TERM 867 921063 - 921081 + r 77 -11.7 -3.54424 | opp_overlap 921063 AAGCACATAAAAAAA GCCGCTG ATCGG CAGCGGC TTTAAAAGGCTAACA Pput_0823 921383 - 921159 - | hypothetical protein TERM 868 921535 - 921517 - R 78 -11.8 -3.41359 | overlap 921515 TTGCGAAAATCAATA GGACTTTC GGC GAAAGTCC CGTGCTAGAGCAGCT Pput_0824 922318 - 921584 - | hypothetical protein Pput_0825 922626 - 922315 - | hypothetical protein TERM 869 922677 - 922698 + r 73 -9.4 -3.93136 | gap 1, overlap 922677 ATTATGCCCGAGTCA C-CCCCGGC GGCAA GCCGGGGAG TTTGTCGCTGAATAT Pput_0826 923614 - 922715 - | putative CheW protein Pput_0827 925003 - 923819 - | HlyD family type I secretion membrane fusion protein Pput_0828 927168 - 925000 - | ABC transporter related Pput_0829 928601 - 927165 - | TolC family type I secretion outer membrane protein TERM 870 928218 - 928246 + g 78 -15.3 -2.78816 | overlap 928204 CGACAGGTTCAGGGC CTGGCTATTGCGG TCG CCGCCATAGCCGG TGTCATAACCGGTGC Pput_0830 952859 - 928665 - | glycoprotein TERM 871 934274 - 934309 + g 79 -15.5 -2.87132 | gap 1, overlap 934302 GTATCAGGTTGTCCG GCGTGGCCGGTGCCAG CGCGC CTGGCGCCG-TCACGC TCTGTGCAGGGGAGA TERM 872 937905 - 937943 + g 76 -15.2 -2.52464 | overlap 937908 GTTGCCAGCGGGGTC GCGCAGGACCACGTCCAG TTC CTGGCCGTCGGTCTGCGC TGGGTTCAGGACCAC TERM 873 938011 - 937969 - G 91 -21.2 -2.79302 | overlap 938002 ACCACGCTGATCACA CCGTCGGCACCGACCTGGGC GTT GCCCAGCACAGTGCCGTCGG CGCTGATGACCTGCA TERM 874 951972 - 951947 - G 70 -10.3 -3.64703 | CGCCTCGCACGGAAA CCGTCGAGCCG GGCT CGGCACGACCG GTGAGGGTGTTACCC TERM 875 952948 - 952936 - R 70 -5.5 -4.36914 | overlap 952947 TCCTTTGGTAGAAAA GCCTC AGC GAAGC CCTAGCCTGCGGGCC Pput_0831 954495 - 952939 - | anaerobic nitric oxide reductase transcription regulator Pput_0832 954650 - 955828 + | nitric oxide dioxygenase TERM 876 955862 - 955919 + F 78 -12 -3.53012 | opp_overlap 955833 CTCTTCGCGGGCACG CCCGCTCCCACAGGTATTGCACCG GTCTTGAATG TGGTGCCGTCTCTGTAGGAGCGGG TTTACCCGCGAAGGG TERM 877 956084 - 956108 + F 93 -7.7 -5.40072 | overlap 956086 GTGTCGAGGGGCTTG CCCCTGCGCGG CAC CTGCGCAGCCG TTTTTTTGCCGCCCG Pput_0833 956285 - 956791 + | disulfide bond formation protein B Pput_0835 957351 - 958292 + | ubiquinol oxidase, subunit II Pput_0836 958296 - 960314 + | cytochrome o ubiquinol oxidase, subunit I Pput_0837 960318 - 960944 + | cytochrome o ubiquinol oxidase, subunit III Pput_0838 960944 - 961276 + | cytochrome o ubiquinol oxidase subunit IV Pput_0839 961288 - 962175 + | protoheme IX farnesyltransferase TERM 878 962199 - 962218 + F 100 -12.1 -5.85178 | opp_overlap 962199 CCTGTTTCACGAAAA CCCCGGC CACTGT GCCGGGG TTTTTTTTGGGTATT TERM 879 962218 - 962199 - f 90 -12.1 -4.25104 | opp_overlap 962199 CCTGTTTCACGAAAA CCCCGGC CACTGT GCCGGGG TTTTTTTTGGGTATT TERM 880 962263 - 962293 + F 100 -19.8 -3.53012 | opp_overlap 962263 CTCTTCGCGGGTAAA CCCGCTCCTACAAG GTT CCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 881 962293 - 962263 - f 100 -22 -3.53012 | opp_overlap 962263 CTCTTCGCGGGTAAA CCCGCTCCTACAAG GTT CCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 882 962365 - 962348 - f 77 -2.7 -5.03314 | overlap 962360 CTGATTTTCAAAAAA TAGATCT GAAA AGTTCTA ATAAAACAGGAAATT Pput_0840 962485 - 963693 + | aminotransferase TERM 883 963694 - 963726 + F 74 -11.9 -3.11966 | opp_overlap 963694, overlap 963692 963683 TTGGCTCGCAAGTAA GCCCATTGGGGCTGC GAA GCAGCCCCAACTGCC TCTTGGGTGAGTTTT TERM 884 963726 - 963694 - f 83 -14.1 -3.33696 | opp_overlap 963694 963692 963683 TTGGCTCGCAAGTAA GCCCATTGGGGCTGC GAA GCAGCCCCAACTGCC TCTTGGGTGAGTTTT Pput_0841 963808 - 964935 + | hypothetical protein TERM 885 964944 - 964971 + F 100 -17 -3.67597 | opp_overlap 964943 964942 CTGCTAGCTGAAAGG GGGCGGCCGGTG AATG CACTGGTCGCCC TTGTTCAGTGGCCGG TERM 886 964979 - 964998 + F 91 -4.9 -5.53288 | GGTCGCCCTTGTTCA GTGGCCG GATCAG CGGCAAC TTTTTTTGCATTCCC TERM 887 965061 - 965047 - f 76 -5.6 -4.72272 | TGGTTGGATTAAAAA TGGCGC CGC GGGCCA GCCCCGATAACAACC Pput_0842 965096 - 965479 + | hypothetical protein TERM 888 965543 - 965527 - f 88 -15.1 -3.53012 | CCTTGCGTCGCGAAA GGGCCGC ACA GCGGCCC CAGGCATCAGCGGCG TERM 889 965574 - 965590 + F 82 -13.7 -3.53012 | opp_overlap 965569 965568 CCGCGAGAATTGCCA GGGCTGC TTT GCAGCCC TTTCGCGACGCAAGG Pput_0843 965725 - 966306 + | GCN5-related N-acetyltransferase Pput_0844 966363 - 966890 + | ECF subfamily RNA polymerase sigma-24 factor Pput_0845 966887 - 967858 + | anti-FecI sigma factor, FecR Pput_0846 967935 - 970460 + | TonB-dependent siderophore receptor Pput_0847 970528 - 971067 + | hypothetical protein Pput_0848 971088 - 971474 + | hypothetical protein Pput_0849 972722 - 971610 - | tRNA 2-selenouridine synthase Pput_0850 973756 - 972722 - | selenophosphate synthetase TERM 890 974607 - 974589 - g 72 -2.4 -4.78848 | overlap 974590 CGTTGAAACAGAAAA TCAAGAAA GCC TTCCTGGA CCTTGACCCGAGCAA Pput_0851 973883 - 974737 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 891 975811 - 975832 + G 71 -13.7 -2.63347 | overlap 975808 975807 TGTTGTTGGCGATCC CGGCTGGCT TGCT GGCCAGCCG TGCCTTGTCCTTGCG TERM 892 976087 - 976118 + G 77 -4.2 -4.83615 | overlap 976105 GCCCGGCGCATGCCT TGTTGCAGGCGGGC AGTG GCCGGCTGGCGGCG TTTTTCTACGGCATC Pput_0852 975069 - 976364 + | phosphonate ABC transporter, inner membrane subunit Pput_0853 976361 - 977128 + | phosphonate ABC transporter, inner membrane subunit TERM 893 977159 - 977135 - T 84 -13.5 -3.64703 | opp_overlap 977134 CGTGCCTGACGGAAA GCCCGGGCTGC AAA GCAGCCCCGAC ATCTCTCAGGCGTCT Pput_0854 978058 - 977165 - | hypothetical protein Pput_0855 978280 - 978573 + | addiction module killer protein Pput_0856 978570 - 978866 + | putative transcriptional regulator Pput_0857 979356 - 978877 - | GCN5-related N-acetyltransferase TERM 894 979460 - 979403 - R 100 -24.3 -3.53012 | gap 1, opp_overlap 979403 CTCTTCGCGGGTAAA CCCGCTCCCACAGGTACTGCACAAGGCT CAG ATCCT-GTGCAGGCCCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 895 979403 - 979460 + r 100 -22.1 -3.53012 | gap 1, opp_overlap 979403 CTCTTCGCGGGTAAA CCCGCTCCCACAGGTACTGCACAAGGCT CAG ATCCT-GTGCAGGCCCTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_0858 980150 - 979527 - | hypothetical protein TERM 896 979934 - 979955 + g 73 -8.7 -4.05446 | gap 1 CTGGCACGTACTGGC GCCAGT-GCG GCA CGCTGCTGGC TTTGTGCTTGAAGAA Pput_0859 980517 - 980939 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 897 981604 - 981619 + G 71 -6 -4.26881 | overlap 981610 CGAAGGCAGGTTGAT CCCCGG CAAA CCGCGG TTTGGTTTTGTAGAA TERM 898 982170 - 982149 - g 76 -5.9 -4.66318 | AGTACGCCAAGAAAA TGGGTGT GCGCATCT ACACCCA CTGCGCCGCAAGGGG Pput_0860 981500 - 982915 + | FAD dependent oxidoreductase Pput_0861 982995 - 983489 + | endoribonuclease L-PSP TERM 899 983534 - 983549 + F 93 -10.4 -4.64657 | opp_overlap 983534, overlap 983546 TCGGGCAAAAAAAAA CCGACC ATAA GGTCGG TTTTTCCGGATTTGG TERM 900 983549 - 983534 - f 100 -10.4 -6.06723 | opp_overlap 983534 983546 TCGGGCAAAAAAAAA CCGACC ATAA GGTCGG TTTTTCCGGATTTGG TERM 901 983618 - 983604 - f 73 -8.6 -4.07885 | opp_overlap 983596 CACTCCTTTCGAAAA CGGATT TTG AATCCG CCGCGTCTACCAATT queA 983752 - 984801 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 984798 - 985931 + | queuine tRNA-ribosyltransferase yajC 985974 - 986309 + | preprotein translocase subunit YajC TERM 902 986330 - 986354 + F 75 -12.7 -3.01712 | CGGTTTTATTTTCCA GTCGGGGCGCG CAA CGCGCCCCGCG TCTTGAACGGGCGGC secD 986373 - 988235 + | preprotein translocase subunit SecD TERM 903 988572 - 988551 - g 78 -10.1 -4.07568 | TGCTGCGCTGCAAAA GGCCGGG GGTGACAA CCCGGCC ACGGTCAAGCGTGTC secF 988246 - 989154 + | preprotein translocase subunit SecF TERM 904 989209 - 989187 - f 100 -14.9 -4.07568 | opp_overlap 989187 CCTGGCGGTGTAAAA GGCGCGAGT ATTGA ACTCGCGCC TTTTTTTTTGCTCCA TERM 905 989187 - 989209 + F 100 -14.9 -6.15828 | opp_overlap 989187 CCTGGCGGTGTAAAA GGCGCGAGT ATTGA ACTCGCGCC TTTTTTTTTGCTCCA Pput_0867 989288 - 989818 + | hypothetical protein TERM 906 989854 - 989893 + T 100 -15.8 -3.85698 | opp_overlap 989854 CTTTTCGCGGGTAAA CCCGCTCCTACAGGGG CAATGCGA TCCATGTAGGAGCGGG TTTATCCGCGAAGAG TERM 907 989893 - 989854 - T 88 -15.1 -3.53012 | opp_overlap 989854 CTTTTCGCGGGTAAA CCCGCTCCTACAGGG GCAATGCGAT CCATGTAGGAGCGGG TTTATCCGCGAAGAG TERM 908 989942 - 989969 + T 70 -10 -3.54129 | opp_overlap 989948, overlap 989948 AAACCACCAGGCACA AAAAAAGCACCT CAAG AGGTGCTTTTTG TTTGCCGCCAATCTG TERM 909 989963 - 989948 - T 100 -9 -5.64274 | opp_overlap 989948 989942 CCAGGCACAAAAAAA GCACCT CAAG AGGTGC TTTTTGTTTGCCGCC TERM 910 989948 - 989963 + T 95 -9 -5.27335 | opp_overlap 989948, overlap 989942 CCAGGCACAAAAAAA GCACCT CAAG AGGTGC TTTTTGTTTGCCGCC Pput_0868 990806 - 989988 - | inositol-phosphate phosphatase Pput_0869 990874 - 991713 + | RNA methyltransferase TERM 911 991928 - 991947 + G 80 -5.6 -4.7254 | gap 1 TCGAAATCCACCCTG GCGCC-ACC ATT GGCCGGCGC TTTTTCATCGACCAT Pput_0870 991717 - 992502 + | serine O-acetyltransferase TERM 912 992533 - 992552 + F 73 -12.8 -2.66634 | overlap 992530 GTCATGGTGGCATGT GGGGCGTG TGCT CGCGCCCC TCGTCTGCTACAATC Pput_0871 992625 - 993173 + | BadM/Rrf2 family transcriptional regulator TERM 913 994352 - 994314 - g 70 -7.5 -3.97709 | gap 2 ACCACCGAAGAAGAA GTCGACTACGCCGCGCAGA AAG TCTGCGAGGC-C-GTCAAC AAACTGCGTGAGCTG Pput_0872 993219 - 994433 + | cysteine desulfurase IscS TERM 914 994507 - 994497 - g 73 -6.8 -4.26188 | GGCATACAGTGAAAA GGTC ATC GACC ACTACGAAAACCCGC Pput_0873 994480 - 994866 + | scaffold protein Pput_0874 994895 - 995218 + | iron-sulfur cluster assembly protein IscA TERM 915 995322 - 995292 - g 74 -13.3 -3.31144 | gap 1 TCTGGATCTCGACAA GCTGGCCA-CTCGC TATC GCGAGCTGGCCCGC GAAGTCCATCCCGAC TERM 916 995482 - 995502 + G 74 -9.7 -3.96148 | opp_overlap 995482 995470 GAAGTGCCCCAGGAA GTCACGGTC CAC GACCCTGAC TTTCTGCTGCAGCAG hscB 995227 - 995748 + | co-chaperone HscB TERM 917 996238 - 996265 + G 71 -11.2 -3.40597 | overlap 996237 CTTGGGTGGCGAGCT GGTAGGCGCGGT GATC ACCGTGCCGGCC TATTTCGATGACGCC TERM 918 996661 - 996619 - g 75 -14.3 -2.70932 | gap 2, overlap 996601 TTGCGCCGCCAAGGA GGC-CC-TGACCGACGCTGAC GTG GTCAACGTCAGCCACGGTGCC TGGCACGGTGAGCTG TERM 919 997227 - 997200 - g 76 -9.2 -4.07568 | gap 1 CCGGTGCTGCGAAAA TCCGCGT-CACCT TCC AGGTGGACGCCGA TGGCCTGCTCAGCGT hscA 995792 - 997654 + | chaperone protein HscA TERM 920 997910 - 997922 + G 71 -5.5 -4.2828 | GAAGCGCAATCGCGC CTTGG TTG CCAGG TTTTCGTCGCTGACG Pput_0877 997658 - 997999 + | ferredoxin, 2Fe-2S type, ISC system Pput_0878 998010 - 998210 + | hypothetical protein TERM 921 998238 - 998266 + F 72 -3.7 -4.72986 | overlap 998236 998243 GGTTAGGCAATCCCC CGGAACCCGCGTA TAA TTCGCGGGTTTAA TTTTTCGTAACACTC TERM 922 998243 - 998261 + F 86 -10.2 -4.35327 | overlap 998236 998238 GGCAATCCCCCGGAA CCCGCGTA TAA TTCGCGGG TTTAATTTTTCGTAA Pput_0879 998299 - 998724 + | nucleoside-diphosphate kinase Pput_0880 998753 - 999898 + | radical SAM protein Pput_0881 999913 - 1000674 + | type IV pilus biogenesis/stability protein PilW Pput_0882 1000671 - 1001693 + | helix-turn-helix domain-containing protein TERM 923 1001975 - 1002000 + G 72 -11.7 -3.37344 | opp_overlap 1001974 1001972 1001975 TTTCGACTACAAGAT CGCCCTGCGCG TTGC CGAGCTGGGCG TTGATTGCCTGCGGA ispG 1001697 - 1002806 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase hisS 1002832 - 1004121 + | histidyl-tRNA synthetase Pput_0885 1004161 - 1004802 + | hypothetical protein Pput_0886 1004803 - 1005945 + | Pyrrolo-quinoline quinone TERM 924 1006031 - 1006003 - f 70 -10.1 -3.54129 | opp_overlap 1006001 1006007 GACACGCCGCCCAAA CTCCGGCCGCTGC CTT GCAGCGGCCTTTG CATTTTCAAGAATTC TERM 925 1006007 - 1006027 + F 100 -18.3 -3.92659 | opp_overlap 1006003, overlap 1006001 CGCCGCCCAAACTCC GGCCGCTGC CTT GCAGCGGCC TTTGCATTTTCAAGA TERM 926 1006296 - 1006273 - g 84 -3.9 -5.1675 | gap 2 GCATGGACGAAAAAA TGGCC--GAGC AGTC GCTCATGGCCA TCGAAGAAGCCGACT engA 1006062 - 1007525 + | GTP-binding protein EngA TERM 927 1007567 - 1007529 - f 76 -13.9 -2.77994 | gap 2, opp_overlap 1007528 1007529, overlap 1007520 1007521 1007565 GACAAACGCTAAGTA GCGCCATGTGGGGGCGAGC AAG GC-CGCCCCCACA-GATGC CCTTTGATCCAGAGC TERM 928 1008553 - 1008587 + G 73 -7 -4.35524 | TTTTACCAGGCTAAG CGCGATCTGTTTTGCG GTT TGCTGGACGGCTCGCG TTTTAACTTTACCCG Pput_0888 1007677 - 1008825 + | putative aminotransferase Pput_0889 1008813 - 1009604 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 929 1009602 - 1009660 + T 100 -22.5 -2.71791 | gap 1, opp_overlap 1009610 1009642 1009643, overlap 1009603 1009607 ACCTTCGAGTTGCAC T-GACAGCAGGGCCGGCTTCTTCGCGGG CTTG CCCGCGAAAGGGCCGGGCCTGCTGGCCA ATTTCCACCGGCCGT TERM 930 1009603 - 1009661 + T 70 -9.59999 -3.53343 | gap 3, opp_overlap 1009610 1009642 1009643, overlap 1009602 1009607 CCTTCGAGTTGCACT ---GACAGCAGGGCCGGCTTCTTCGCGGG CTTG CCCGCGAAAGGGCCGGGCCTGCTGGCCAA TTTCCACCGGCCGTT TERM 931 1009651 - 1009610 - T 86 -17.9 -2.64616 | opp_overlap 1009607 1009602 1009603, overlap 1009642 1009643 GTTGCACTGACAGCA GGGCCGGCTTCTTCGCGGG CTTG CCCGCGAAAGGGCCGGGCC TGCTGGCCAATTTCC Pput_0890 1012281 - 1009729 - | flavodoxin/nitric oxide synthase TERM 932 1011591 - 1011625 + g 85 -15 -3.63569 | CTTCACCACGTTTTT GCTGCTGGCCCGCG GCCGGCG CGTCGGCCAGCAGC TTGTTCAGGCCTTCA TERM 933 1012364 - 1012344 - R 93 -12.5 -4.2349 | CCTTGATACGCAAAA GCCCCGCTC AAT GACCGGGGC GGGGGTGGGCTTCTT Pput_0891 1014826 - 1012535 - | TonB-dependent siderophore receptor TERM 934 1012926 - 1012954 + g 71 -13.2 -3.09933 | GCGAACACCTGCCAC TTGTCGGTCAGC TTGCC GCTGGCCGACAG TTCGATACCTTGAAC Pput_0892 1015048 - 1015728 + | putative hydroxylase TERM 935 1015880 - 1015925 + G 74 -12.5 -3.39142 | overlap 1015881 TGCTGGGGCAGATCC TGCTGGATGGGCGTGGCATCC AGCA GGATGCCACGGTTGCCCGGCG TTGGTTCGGTATCGC TERM 936 1015881 - 1015924 + G 71 -13.8 -2.63164 | overlap 1015880 GCTGGGGCAGATCCT GCTGGATGGGCGTGGCATCC AGCA GGATGCCACGGTTGCCCGGC GTTGGTTCGGTATCG TERM 937 1016224 - 1016250 + G 74 -15 -2.63631 | overlap 1016230 CAGGGCATTGCCACG GCGCCCAGCCCG GCG CGGGCGGTGCGC TGGTATCGGCGTTCG Pput_0893 1015732 - 1016481 + | Sel1 domain-containing protein TERM 938 1016785 - 1016768 - T 100 -14.1 -4.3586 | opp_overlap 1016768 GCACGCACATGAAAA CGGGGCC TTTC GGCCCCG TTGTGCATTACAGAT TERM 939 1016768 - 1016785 + T 85 -14.1 -3.42056 | opp_overlap 1016768 GCACGCACATGAAAA CGGGGCC TTTC GGCCCCG TTGTGCATTACAGAT Pput_0894 1017956 - 1016793 - | ornithine decarboxylase Pput_0895 1018451 - 1018948 + | ECF subfamily RNA polymerase sigma-24 factor Pput_0896 1018969 - 1019931 + | anti-FecI sigma factor, FecR TERM 940 1020198 - 1020210 + G 74 -4.8 -4.56597 | opp_overlap 1020197 GCTCGGCCAGCAAAC CAGC CTGCA GCTG TTTTTCAGCCCCGAG Pput_0897 1020040 - 1022469 + | TonB-dependent siderophore receptor TERM 941 1022482 - 1022498 + T 83 -15.1 -3.10255 | overlap 1022478 1022472 TGATCGAGATTGCCG GGGCCGC TTT GCGGCCC TTCGCTCGCTCTTGT Pput_0898 1023793 - 1022636 - | glycine betaine/L-proline ABC transporter, ATPase subunit Pput_0899 1024443 - 1023790 - | binding-protein-dependent transport systems inner membrane component Pput_0900 1025351 - 1024440 - | substrate-binding region of ABC-type glycine betaine transport system Pput_0901 1026078 - 1025365 - | binding-protein-dependent transport systems inner membrane component TERM 942 1026372 - 1026355 - H 83 -4.1 -5.24129 | TTTGGCGAGAAAAAA CAGCG ACTTAATG CGCTG CAGGCGTTGAAATAA TERM 943 1026869 - 1026821 - g 71 -10.9 -3.48063 | overlap 1026814 GATGGAAATGGAGAA GCAGCGCGGCATCTCCATCACCA CCT CGGTGATGCAGTTCCCGTACCGC GAGCACATGATCAAC prfC 1026594 - 1028219 + | peptide chain release factor 3 TERM 944 1028328 - 1028346 + T 70 -11.6 -2.90349 | overlap 1028327 CGGGCGTGCCCGCGA AGGGCCGC TAG GCGGCCCC ATTTCAATTTCCGGC Pput_0903 1029429 - 1028350 - | extracellular solute-binding protein Pput_0904 1029823 - 1029482 - | protein of unknown function DUF861, cupin_3 Pput_0905 1031263 - 1029857 - | FAD dependent oxidoreductase Pput_0906 1032152 - 1031328 - | helix-turn-helix domain-containing protein TERM 945 1032394 - 1032412 + H 95 -13.8 -4.42639 | GCATTGAGATTTTGG GGGCCGCG CTT TGCGGCCC TTTTGCTTCAACTGT TERM 946 1033383 - 1033403 + H 79 -8.4 -4.36343 | AAGGCGGTAGGATTT TCATGTGT CAGAA ACACATGA TTTCTTAATTGGTTC TERM 947 1033490 - 1033510 + G 77 -4.5 -4.82901 | opp_overlap 1033480, overlap 1033492 AATATTCTGGAGTCA GACCCGTTC GAA GGTCGGGAC TTTTTCTGGGAGCAA Pput_0908 1033430 - 1034179 + | hypothetical protein Pput_0909 1034198 - 1034656 + | glyoxalase/bleomycin resistance protein/dioxygenase Pput_0910 1034653 - 1035099 + | hypothetical protein Pput_0911 1035110 - 1035985 + | hypothetical protein TERM 948 1036665 - 1036655 - g 84 -2.4 -5.27779 | overlap 1036647 CCGAATACGAAAAAA TCCG GAT CGGT GATCACCCCAGCATC Pput_0912 1035982 - 1037214 + | biotin carboxylase-like protein Pput_0913 1037255 - 1038496 + | sodium/hydrogen exchanger Pput_0914 1038572 - 1039441 + | hypothetical protein Pput_0915 1039536 - 1040516 + | LysR family transcriptional regulator Pput_0916 1040519 - 1040698 + | rubredoxin-type Fe(Cys)4 protein TERM 949 1040770 - 1040795 + T 93 -13.4 -3.86897 | opp_overlap 1040765 AGCCGACGAAGGCCA TGGTGTCCAC CTAAAA GTGGACACCA TTTCTGGCCCATCAA TERM 950 1041090 - 1041102 + T 79 -7.7 -4.66833 | overlap 1041089 CGTGACTGGGCAGCG CAGCA AAC TGCTG TTTTTCGCATTGAGG dppF 1042106 - 1041138 - | dipeptide transporter ATP-binding subunit Pput_0918 1043074 - 1042106 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Pput_0919 1044011 - 1043085 - | binding-protein-dependent transport systems inner membrane component TERM 951 1043635 - 1043622 - G 72 -3.7 -4.58283 | overlap 1043623 1043624 CAACTGCGGGAAAAA GCCGG CCAG CAGGC CAAGGAGAATGCCCG TERM 952 1043960 - 1043990 + g 71 -4.8 -4.4648 | AGGGGTAGAGCAGGC TCTG-GTCCACCGG GCTGG CCGGTG-ACACGGA TTTTGTAATCGGGCT Pput_0920 1045032 - 1044022 - | alkaline phosphatase TERM 953 1045079 - 1045118 + r 79 -10.7 -3.8917 | gap 2, overlap 1045080 1045084 ATCAGCCCGGTACGG CAGAG-CCGCCGGTC-CCC GTGT GGGTGGCCGGCGGTCGTTG TTGTTCTACTTCACC TERM 954 1045080 - 1045115 + r 79 -9.7 -4.06611 | overlap 1045079 1045084 TCAGCCCGGTACGGC AGAGCCGCCGGTC-CCC GTGT GGGTGGCCGGCGG-TCG TTGTTGTTCTACTTC TERM 955 1045084 - 1045112 + r 85 -16 -3.05496 | gap 1, overlap 1045080 1045079 CCCGGTACGGCAGAG CCGCCGGTC-CCC GTGT GGGTGGCCGGCGG TCGTTGTTGTTCTAC Pput_0921 1046734 - 1045124 - | extracellular solute-binding protein Pput_0922 1048192 - 1046813 - | outer membrane porin TERM 956 1046965 - 1046979 + g 70 -10 -3.57144 | AGCTGGTGCCGATAC CCCACT CGT AGTGGG TTTCGCCATCCAGGC Pput_0923 1050013 - 1048421 - | extracellular solute-binding protein TERM 957 1048822 - 1048842 + g 73 -11.2 -3.55563 | CCTTGAATCCGAGCT TGCTCCAG TCGGC CTGGAGCA TTTCGGCCATCAGCT Pput_0924 1051786 - 1050161 - | extracellular solute-binding protein TERM 958 1050992 - 1051016 + g 73 -2.9 -4.6902 | gap 1 GTCGGCCGGGCGTGG GAACAGGGTG ACCTGG CACTC-GTTC TTTTTAAGCTTCTGC Pput_0925 1052883 - 1052167 - | hypothetical protein TERM 959 1053002 - 1053033 + H 78 -14.4 -2.56273 | opp_overlap 1052988 1052998, overlap 1052998 CCTGTGACAAAGTGT GGCGCTTTGCCGCA TCGC TGCAGCGAGGCGCC TGGCTTCGGTATACT TERM 960 1053860 - 1053835 - g 76 -11.3 -3.69323 | gap 1, overlap 1053859 CCAGGACCAGGTAAA GCTGT-GCAAAG AGA CTTTGCAACAGC TGGTGCGCGCAGCCG Pput_0926 1053086 - 1054342 + | integral membrane sensor signal transduction histidine kinase Pput_0927 1054339 - 1054902 + | two component Fis family transcriptional regulator TERM 961 1055940 - 1055967 + G 70 -9.8 -3.6217 | gap 1 ACCGGCAGACACCTT CGCC-GCCCTTGG CCA CTGGGGGCAGGCG TTATATGTGCTGCCT TERM 962 1056021 - 1055991 - g 73 -6.9 -4.25104 | gap 2 GCTGCCTGAGCAAAA GCTGGTGATCGTGCG CTA CGC-CGATGACC-GC GACGGCAGCTATCGA Pput_0928 1055011 - 1056090 + | beta-lactamase TERM 963 1056323 - 1056290 - g 83 -9.5 -4.25104 | gap 1, overlap 1056292 CCTGCTGGAGGAAAA CA-GCCAGCAGCGGCG AGT CACCGCTGAAGGCCTG GGGCGACGCAGCCAG TERM 964 1056320 - 1056292 - g 78 -12.3 -3.73042 | overlap 1056290 TGCTGGAGGAAAACA GCCAGCAGCGGCG AGT CACCGCTGAAGGC CTGGGGCGACGCAGC Pput_0929 1056087 - 1056383 + | hypothetical protein Pput_0930 1056428 - 1057009 + | YceI family protein Pput_0931 1057011 - 1058168 + | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein Pput_0932 1058220 - 1058798 + | PfpI family intracellular peptidase Pput_0933 1059227 - 1058829 - | hypothetical protein Pput_0934 1059343 - 1059933 + | hypothetical protein Pput_0935 1059930 - 1060802 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_0936 1062445 - 1060922 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 965 1062518 - 1062483 - R 76 -5.5 -4.74706 | GGGAACATTCAAAAA GACGC-TCGACATAGCC GACC AGC-ACGTCGAAGCGCC TTGCAAGGCGCCGGC Pput_0937 1063864 - 1062794 - | hypothetical protein TERM 966 1062835 - 1062824 - G 86 -7.2 -4.77157 | GCAACGGAGTAAAAA GCCC ACGC GGGC ACGACCGGACTCGAA TERM 967 1064178 - 1064197 + H 71 -7.8 -4.17048 | opp_overlap 1064182 TGGTACATTCGCCAT GAAACCCG CCGT CGGGTTCC TTGTTTTGGAGAAAC Pput_0938 1064220 - 1065140 + | hypothetical protein TERM 968 1065158 - 1065180 + T 95 -14.8 -3.72893 | overlap 1065161 GGCGCCTTGAAGTGC GAAGGGCCGC AAA GCGGCCCCTC TTTCATGCGGCACTG TERM 969 1065161 - 1065177 + T 80 -15.1 -2.66695 | overlap 1065158 GCCTTGAAGTGCGAA GGGCCGC AAA GCGGCCC CTCTTTCATGCGGCA Pput_0939 1065911 - 1065183 - | PAP2 (acid phosphatase) superfamily protein-like protein TERM 970 1065395 - 1065369 - G 70 -7.8 -3.97834 | overlap 1065370 CAAGGCCACTACAAA TGCCACCCGCGC CAG GCGCGGCTTGCG ATCACGCAGCATGAA TERM 971 1065452 - 1065417 - G 73 -8.2 -4.00445 | opp_overlap 1065450, overlap 1065433 CAGCATGAAGAACAA GGCGAACAGGCAGAAA CCGG TCGCTGCATGCCCGCC CGGCCAGCACAGGCC Pput_0940 1066095 - 1066778 + | two component transcriptional regulator Pput_0941 1066768 - 1068078 + | integral membrane sensor signal transduction histidine kinase TERM 972 1068702 - 1068692 - g 78 -6.8 -4.56597 | CTGGCGCCGGAAAAA GCTG GAG CAGC GCCGTAGCGCCAAGG Pput_0942 1068186 - 1068866 + | methyltransferase type 11 TERM 973 1069185 - 1069207 + G 76 -7.6 -4.38712 | CAGTGGCGCGCGCTG CTGGTCAGCG AAG CGCTGGACGG TTTTGTCGAACTCGA Pput_0943 1068873 - 1069571 + | lipopolysaccharide kinase Pput_0944 1069571 - 1069804 + | hypothetical protein TERM 974 1069825 - 1069856 + T 100 -20.2 -4.71061 | opp_overlap 1069825 GCGTTAGCTGAAAAA GCCAGAGGCCTCGC GATT GCGGGGCCTTTGGC TTTTTGCATCTGCGT TERM 975 1069856 - 1069825 - T 100 -15.8 -4.62069 | opp_overlap 1069825 GCGTTAGCTGAAAAA GCCAGAGGCCTCGC GATT GCGGGGCCTTTGGC TTTTTGCATCTGCGT Pput_0945 1072957 - 1069913 - | multidrug efflux protein Pput_0946 1074118 - 1072970 - | RND family efflux transporter MFP subunit TERM 976 1074299 - 1074259 - R 72 -10.4 -3.53012 | gap 1, opp_overlap 1074259 CTTTTCGCGGCTAAA GCCGCTCCTACAGGG-ACT GTGT AGAACCCTGTGGGATCGGC TTTAGCTGCGAGAAG TERM 977 1074259 - 1074299 + r 81 -12.6 -3.64703 | gap 1, opp_overlap 1074259 CTTTTCGCGGCTAAA GCCGCTCCTACAGGG-ACT GTGT AGAACCCTGTGGGATCGGC TTTAGCTGCGAGAAG Pput_0947 1075434 - 1074337 - | hypothetical protein Pput_0948 1076501 - 1075437 - | periplasmic lipoprotein-like protein TERM 978 1075981 - 1076027 + g 79 -9.2 -4.19177 | ATCTCCTCTGCCAAG GCCTTCTGGTGCGCGCCGATGG CCA CCAGCAGCGGGCAGTAGCGGGC TTTCTGTTCGGCAGT TERM 979 1076564 - 1076539 - R 74 -11.9 -3.1706 | gap 1, overlap 1076548 AAGTGAGTTCAGGAA CGCGAGCAACGC AGC GCGCTGCTCG-G CATCGAAAGTGAGTA Pput_0949 1077948 - 1076521 - | hypothetical protein Pput_0950 1078444 - 1078058 - | hypothetical protein Pput_0951 1078941 - 1078459 - | hypothetical protein TERM 980 1079063 - 1079031 - R 100 -23.6 -3.73224 | opp_overlap 1079037, overlap 1079037 TTACCCGGCAGCAAA CGAAAACGCCCGGC ACAAG GCCGGGCGTTTTCG ATGAAGCGCTACAGC TERM 981 1079057 - 1079037 - R 100 -15.4 -4.58773 | opp_overlap 1079037, overlap 1079031 GGCAGCAAACGAAAA CGCCCGGC ACAAG GCCGGGCG TTTTCGATGAAGCGC TERM 982 1079037 - 1079057 + r 100 -15.4 -4.18018 | opp_overlap 1079031 1079037 GGCAGCAAACGAAAA CGCCCGGC ACAAG GCCGGGCG TTTTCGATGAAGCGC Pput_0952 1080417 - 1079083 - | hypothetical protein TERM 983 1080321 - 1080333 + g 78 -4.7 -4.81083 | CAGGTGCCTGGGCTT GCGGC GCG GCGGC TTTTTCGTCCTTGCC Pput_0953 1082661 - 1080577 - | diguanylate cyclase/phosphodiesterase TERM 984 1081414 - 1081452 + g 71 -8.1 -3.8709 | gap 1 GAACTGGTAGCGGTT GCGCGAGCGGGCCTTGGC CAGG GTCATGGTCTGTTCG-GC TTTCTGCAGCAGTTT TERM 985 1082311 - 1082329 + g 79 -8.1 -4.3739 | overlap 1082317 1082318 CCAGCGCATGGACAT GTCCTGC AGCGG GCGGGAC TTTTCTGCCAGCATG TERM 986 1082838 - 1082854 + r 81 -10.8 -4.05446 | opp_overlap 1082838 ACAGGCACAAAAAAA CCCGGC ACATG GCCGGG TTTCTCGTTCAAGGC TERM 987 1082854 - 1082838 - R 100 -10.8 -5.65177 | opp_overlap 1082838 ACAGGCACAAAAAAA CCCGGC ACATG GCCGGG TTTCTCGTTCAAGGC Pput_0954 1083474 - 1082878 - | superoxide dismutase Pput_0955 1084345 - 1083746 - | lysine exporter protein LysE/YggA Pput_0956 1084447 - 1085337 + | chromosome replication initiation inhibitor protein TERM 988 1085548 - 1085565 + G 71 -8.3 -3.86524 | GGGTGATCTGGGTGA CGCCGAG CTGG CCCGGCG TTTGTGCCAGGGTGT Pput_0957 1085387 - 1086379 + | NAD-dependent epimerase/dehydratase Pput_0958 1086453 - 1087322 + | hypothetical protein Pput_0959 1088467 - 1087418 - | NADH:flavin oxidoreductase/NADH oxidase TERM 989 1087574 - 1087598 + g 77 -13.5 -3.29144 | opp_overlap 1087551 ATCCGCTTTGCCACT GGCCAGGGCCG CAT TGGCACTGGCC TTGTCGAACCGCTCG TERM 990 1087870 - 1087901 + g 74 -13 -3.26473 | gap 1, overlap 1087895 GGCGCGCGCGGTTTT CCAGCGAGCC-ACCG TAA CGGTCGGTGCGCTGG TTGGTGCTGCTTTGC Pput_0960 1088787 - 1088485 - | regulatory protein, ArsR Pput_0961 1088938 - 1089522 + | hypothetical protein Pput_0962 1090423 - 1089635 - | phospholipid/glycerol acyltransferase Pput_0963 1091178 - 1090423 - | hypothetical protein Pput_0964 1091339 - 1092226 + | hypothetical protein Pput_0965 1092207 - 1092350 + | hypothetical protein Pput_0966 1092420 - 1093361 + | auxin efflux carrier Pput_0967 1093418 - 1094779 + | amino acid permease-associated region Pput_0968 1095966 - 1094923 - | CaCA family Na(+)/Ca(+) antiporter Pput_0969 1096401 - 1096027 - | rare lipoprotein A gatB 1097975 - 1096530 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 991 1097659 - 1097698 + g 71 -13.6 -2.66435 | gap 1, overlap 1097656 TCTTCCAGCGCGATG TCCAGGTGGCCCTTGCCGA CGA TCGGC-AGGTCCATCTGGC TGATCTGGTAGCCCT gatA 1099438 - 1097987 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 1099741 - 1099454 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 992 1099498 - 1099529 + g 75 -11.6 -3.54676 | gap 1, overlap 1099494 1099499 1099501 GACCGCTTTCGGTCG ACGGCGCGATGGCCT GGT AGGC-ATCGCGCTGG TTGCTTTCGGTGACT TERM 993 1099499 - 1099528 + g 78 -15.1 -2.72324 | gap 1, overlap 1099498 1099494 1099501 ACCGCTTTCGGTCGA CGGCGCGATGGCCT GGT AGGC-ATCGCGCTG GTTGCTTTCGGTGAC TERM 994 1099501 - 1099526 + g 74 -14.1 -2.90283 | gap 1, overlap 1099499 1099498 1099494 CGCTTTCGGTCGACG GCGCGATGGCCT GGT AGGC-ATCGCGC TGGTTGCTTTCGGTG Pput_0973 1099946 - 1100983 + | cell shape determining protein MreB TERM 995 1101451 - 1101398 - g 70 -12.4 -3.19293 | opp_overlap 1101441 1101442 1101445, overlap 1101393 AAGCTCAAGACCGAA GCCCTGCTGCTG-CAGGGGCGCCTGC AGAA GCTGGCGGCCCTGACCG-AGCAGAAC GTGCGGCTGCGCGAG Pput_0974 1101209 - 1102201 + | rod shape-determining protein MreC Pput_0975 1102201 - 1102689 + | rod shape-determining protein MreD Pput_0976 1102722 - 1103333 + | Maf-like protein Pput_0977 1103388 - 1104845 + | ribonuclease TERM 996 1108599 - 1108626 + G 73 -12.6 -3.22298 | opp_overlap 1108575 GGCGGCGTTGATCGT CGGCGCGCCGGC GGTG GGCGGTGCGCTG TTCCTGGTCGATCGG Pput_0978 1104934 - 1108749 + | hypothetical protein TERM 997 1109268 - 1109302 + G 89 -12.7 -4.13014 | TACAGCGCGCTGCGC GCTGCCGGCGCGGAG CTGAT CACAGCGCCAGCAGC TTTTACCGCTGTGAC TERM 998 1109541 - 1109564 + G 100 -5.9 -5.40072 | overlap 1109532 1109542 1109543 TCCATTCGGGCGCGC ATGCCGGTG GTATCG CACCGGCGC TTTTTTTCGCAGGGC TERM 999 1109542 - 1109563 + G 74 -9.4 -3.83561 | overlap 1109532 1109541 1109543 CCATTCGGGCGCGCA TGCCGGTG GTATCG CACCGGCG CTTTTTTTCGCAGGG Pput_0979 1108758 - 1109609 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_0980 1109612 - 1111051 + | peptidase U62, modulator of DNA gyrase Pput_0981 1111630 - 1111109 - | hypothetical protein Pput_0982 1111740 - 1113086 + | peptidase U62, modulator of DNA gyrase TERM 1000 1113236 - 1113253 + F 100 -9.8 -5.33405 | opp_overlap 1113229 1113236 CTGCAAATCCGAAGA CCCGGC CCTCGC GCCGGG TTTTTATTTCATCAC TERM 1001 1113436 - 1113379 - g 79 -9 -4.11216 | gap 3, opp_overlap 1113381 GCCCTACCTGGAAAA CTGGCGCTGGCTCAGCCGGCG-CATTCGC TGT GCGCTCGACCCCGAC-GAGCC-GCGCCTG ATCGAGCATTACCTG Pput_0983 1113332 - 1113733 + | hypothetical protein fumC 1113723 - 1115102 + | fumarate hydratase Pput_0985 1115479 - 1116204 + | superoxide dismutase Pput_0986 1116216 - 1117109 + | zinc/iron permease Pput_0987 1117409 - 1117137 - | phosphotransferase system, phosphocarrier protein HPr Pput_0988 1118282 - 1117428 - | hypothetical protein TERM 1002 1117748 - 1117730 - G 78 -6.7 -4.62336 | gap 1, overlap 1117731 1117733 AGCGCACGTCAAAAA CCAGGTCG GCGT CGACC-GG CATGCCCCGTTTGAA Pput_0989 1118749 - 1118285 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 1003 1118768 - 1118790 + r 71 -7.6 -4.14652 | overlap 1118783 TGAGGGGGATCAGCG GGCAGCTGCA CCT TGCAGCAGGC TTTGCTGTTTTTCCT TERM 1004 1118783 - 1118797 + r 82 -6.4 -5.00412 | overlap 1118768 GGCAGCTGCACCTTG CAGCAG GCT TTGCTG TTTTTCCTTGTGTTT Pput_0990 1119070 - 1118762 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 1005 1119123 - 1119101 - R 71 -9.1 -3.85698 | overlap 1119103 TTGCCCGTGCATAAA GAGGCAGGT CTTGC ACCTGCCAC GAAAACGCTGTGGCA TERM 1006 1119121 - 1119103 - R 72 -10.3 -3.51934 | overlap 1119101 GCCCGTGCATAAAGA GGCAGGT CTTGC ACCTGCC ACGAAAACGCTGTGG Pput_0991 1120643 - 1119150 - | RNA polymerase factor sigma-54 Pput_0992 1121544 - 1120819 - | ABC transporter related Pput_0993 1122069 - 1121545 - | cell envelope biogenesis YhbN Pput_0994 1122628 - 1122056 - | hypothetical protein Pput_0995 1123161 - 1122637 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Pput_0996 1124148 - 1123174 - | KpsF/GutQ family protein TERM 1007 1123945 - 1123930 - G 80 -6 -4.7497 | overlap 1123932 CGGATGCACGAAAAA CGCCGG TGTG CCGGTG CTGGCCAGGGTCGCG TERM 1008 1124801 - 1124780 - g 70 -12.3 -3.14344 | gap 1 CATCGTGTTGATGAA GCTGCAGGCC GTG GGCCTGC-GC GGTGCCATCGACCTG Pput_0997 1124397 - 1125206 + | ABC transporter related Pput_0998 1125206 - 1126003 + | hypothetical protein TERM 1009 1126205 - 1126171 - g 71 -9.3 -3.7108 | gap 1 ACGGTCAGAGCTAAA GTGACCATGGCCGGTG TGAC CATCGGCAA-GGTCAC CGCCATCGATCTGGA Pput_0999 1126003 - 1126485 + | hypothetical protein TERM 1010 1127032 - 1126998 - g 76 -13.6 -3.18681 | CGTCAACGGCATCAA CATCGGCAAGCTGTTC CGT GACCAGTTCGCCGATG CCATGCAGCGCAACG Pput_1000 1126495 - 1127142 + | toluene tolerance family protein Pput_1001 1127160 - 1127441 + | hypothetical protein TERM 1011 1127461 - 1127506 + F 100 -19.8 -5.39721 | gap 1, opp_overlap 1127478 CAGGCACGGATGATG GCCCCTCGGTCAGCGAAGCCT TCGTT GGGCTTCGCAGGC-GAGGGGC TTTTTTGTATGATGG Pput_1002 1127559 - 1127798 + | BolA family protein TERM 1012 1129074 - 1129046 - g 80 -5.9 -4.7497 | overlap 1129048 1129068 1129069 TGCATCGAGGAAAAA CTGCAGATGCTCG GCG CGAAAATCCGCCG CGTACCGGGCTAGTA Pput_1003 1127822 - 1129087 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1013 1129152 - 1129125 - f 88 -16.4 -3.17194 | gap 1 ACCTTTTGAATTGAA TGC-GGCCAGGTC GAT GACCTGGCCGGCA GCAGCCGCTTAAGGA hisG 1129179 - 1129814 + | ATP phosphoribosyltransferase catalytic subunit hisD 1130101 - 1131426 + | histidinol dehydrogenase Pput_1006 1131429 - 1132475 + | histidinol-phosphate aminotransferase TERM 1014 1132971 - 1133008 + T 85 -15.7 -3.16881 | GCGGGGATCGCGCCA GCCCTTGAGGAACGACA GAAC TGTTGCTTCTCAAGGGC TTAATAGCGTCGGTC Pput_1007 1134193 - 1133009 - | hypothetical protein Pput_1008 1134333 - 1134983 + | GntR domain-containing protein TERM 1015 1135127 - 1135167 + G 77 -14 -3.30124 | gap 1, overlap 1135083 1135081 1135080 1135166 GGCCATGGCTGTTGC TGCTGGGC-CTGGTTCTGG TGGC CCTGAACCTGCGCCCGGCA TTGTCGAGCATGGCG Pput_1009 1134997 - 1136277 + | cyanate transporter TERM 1016 1136335 - 1136282 - f 81 -14.8 -2.7563 | gap 1 AAAAAGTCTGAAGCA TGTTTTTG-CAGTACCGTCCTCTTG CCTGC CAAGAGGACGGTACTGGCATAAGCC ATCGGGGCAGATTAT Pput_1010 1136387 - 1136863 + | hypothetical protein Pput_1012 1138152 - 1137145 - | nucleoid-associated protein NdpA Pput_1011 1136856 - 1137197 + | GIY-YIG nuclease superfamily protein TERM 1017 1138089 - 1138111 + gF 74 -2.5 -4.87665 | AGTCGCGAGCATGCA GCACGGCGG GGCTG CCATCGGGC TTTTTGTCGATCAGG Pput_1013 1138522 - 1138803 + | histone family protein DNA-binding protein TERM 1018 1138845 - 1138821 - T 100 -20 -3.72576 | opp_overlap 1138821 GTTGTTTTGACGAAA CCGCGCCCGG CTTGC CCGGGCGCGG TTTTTTCATGCCTGT TERM 1019 1138821 - 1138845 + T 100 -20 -5.17353 | opp_overlap 1138821 GTTGTTTTGACGAAA CCGCGCCCGG CTTGC CCGGGCGCGG TTTTTTCATGCCTGT Pput_1014 1139804 - 1138851 - | putative SAM-dependent methyltransferase TERM 1020 1139847 - 1139863 + r 82 -13.7 -3.53012 | opp_overlap 1139844 GGCTTGAAGAACCTG GGGCTGC TAC GCAGCCC TTTCGCGACACAAGG TERM 1021 1139934 - 1139877 - R 100 -20.5 -3.48276 | gap 1, opp_overlap 1139877 CCTTTCGCGACACAA GGCCGCTCCCACAGGGTGGTGGC-GCCT TGA AGGTTGGCGCCGTCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 1022 1139877 - 1139934 + r 100 -29.3 -3.48276 | gap 1, opp_overlap 1139877 CCTTTCGCGACACAA GGCCGCTCCCACAGGGTGGTGGC-GCCT TGA AGGTTGGCGCCGTCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 1023 1139964 - 1139948 - R 72 -10.8 -3.53012 | opp_overlap 1139942 1139960 CCTTGTGTCGCGAAA GGGCCG TGCAG CGGCCC CAACGGTCTCTCTAG valS 1142829 - 1139983 - | valyl-tRNA synthetase TERM 1024 1140647 - 1140661 + g 71 -5.6 -4.25283 | overlap 1140637 CGGGTGCCACGGGCG CGCTCT ACC GGGGCG TTTTCGTCCCACAGT TERM 1025 1141724 - 1141749 + g 70 -10.5 -3.54741 | gap 1, overlap 1141717 CACGGCTCGATGACC GTGCCGGAACGG TCG CC-TTTCGGCAC TTTCAGGGCGTGGTC Pput_1016 1143393 - 1143028 - | hypothetical protein Pput_1017 1143827 - 1143399 - | DNA polymerase III subunit chi Pput_1018 1145371 - 1143878 - | leucyl aminopeptidase TERM 1026 1144687 - 1144697 + g 75 -3.2 -4.91109 | overlap 1144654 ACGCGCCCATGCCCA GGTC CTT GATC TTTTTCTCGTCCAGC TERM 1027 1145570 - 1145596 + H 72 -10.8 -3.38786 | overlap 1145571 TGCGCGCACTTTACA TGGAGGTTCGCC TTT GGCGAACCGGCA TTGGTCTTGGATGTA TERM 1028 1146541 - 1146574 + G 74 -10.1 -3.73953 | overlap 1146542 TCACCCTGCTGGCGG TGCCACTGTCGCGGG TCAA CCCGCGCCAGGGCCG TTTCCTCAAGCTGCT Pput_1019 1145637 - 1146788 + | permease YjgP/YjgQ family protein Pput_1020 1146781 - 1147842 + | permease YjgP/YjgQ family protein TERM 1029 1147864 - 1147881 + T 100 -12.7 -4.76644 | opp_overlap 1147864 GAGCTGCACAAGAAA GCCGACC TCAG GGTCGGC TTTTTCATGGGTGTT TERM 1030 1147881 - 1147864 - T 93 -12.7 -4.31433 | opp_overlap 1147864 GAGCTGCACAAGAAA GCCGACC TCAG GGTCGGC TTTTTCATGGGTGTT Pput_1021 1148479 - 1147991 - | RDD domain-containing protein TERM 1031 1148528 - 1148548 + r 73 -8.2 -4.13014 | opp_overlap 1148529, overlap 1148529 TACGGGCAAAAAAAA ACCCCTGC ACTTG GCAGGGGC TTTTCAAAGTCTGGC TERM 1032 1148547 - 1148529 - R 100 -11.7 -6.07627 | opp_overlap 1148528 1148529 ACGGGCAAAAAAAAA CCCCTGC ACTTG GCAGGGG CTTTTCAAAGTCTGG TERM 1033 1148529 - 1148547 + r 71 -11.7 -3.07487 | opp_overlap 1148529, overlap 1148528 ACGGGCAAAAAAAAA CCCCTGC ACTTG GCAGGGG CTTTTCAAAGTCTGG Pput_1022 1148779 - 1148570 - | cold-shock DNA-binding domain-containing protein Pput_1023 1150258 - 1149137 - | glycine cleavage system T protein TERM 1034 1150310 - 1150330 + r 81 -8.9 -4.43949 | overlap 1150312 GATGATGTTGACGGC CAGGCCGCC ACG GGCGGTCTC TTTGTATTTGCTTTT Pput_1024 1151662 - 1150286 - | L-serine dehydratase 1 TERM 1035 1150312 - 1150328 + g 76 -11.5 -3.79096 | overlap 1150310 TGATGTTGACGGCCA GGCCGCC ACG GGCGGTC TCTTTGTATTTGCTT TERM 1036 1150816 - 1150826 + g 79 -8.2 -4.3534 | opp_overlap 1150815 CGGTGACCACACGAC CGCC GTA GGCG TTTTCCTCGTTCACC TERM 1037 1151030 - 1151040 + g 73 -8.2 -4.05446 | CCAGATGCGCAGCAG CCCG GCT CGGG TTTCTGCTTCAGGGC Pput_1025 1154624 - 1151769 - | glycine dehydrogenase TERM 1038 1151937 - 1151958 + g 74 -5.1 -4.58283 | gap 1, overlap 1151942 CCATTCGCCAACCAG CTCAGCCGCA GTG TGCGG-TGCG TTTTTCAGCGGGTTG Pput_1026 1155019 - 1154636 - | glycine cleavage system protein H TERM 1039 1154943 - 1154911 - G 76 -7.7 -4.26076 | gap 1, opp_overlap 1154917 GCAGTTGCACGAAAA CCACGT-CGCCCAG GGCATT CTGGGCGTAGGCGG TGATGCCCACGGTGA TERM 1040 1155053 - 1155069 + r 71 -11.5 -3.0634 | AGGGCGTTGGGGGGG GCGCGGT GGC GCCGCGC TCTTAGGGTAGGATT TERM 1041 1155207 - 1155225 + r 77 -11.8 -3.28924 | opp_overlap 1155207 CTCATGGGAGGAAAA GGGTTTGA GCA TCAAACCC TTGTGCACCCACGTC TERM 1042 1155225 - 1155207 - R 90 -11.8 -4.26903 | opp_overlap 1155207 CTCATGGGAGGAAAA GGGTTTGA GCA TCAAACCC TTGTGCACCCACGTC TERM 1043 1155251 - 1155287 + r 79 -14.7 -2.78384 | ACGTCGAGGAGGGTA TGTATCGTTTTCGTTAC GAC GTATTGAAAACGATACA TATGGTGCCCGACAG Pput_1027 1155792 - 1155325 - | DoxX family protein Pput_1028 1156558 - 1155785 - | hypothetical protein Pput_1029 1157388 - 1156555 - | hypothetical protein Pput_1030 1157692 - 1157405 - | hypothetical protein TERM 1044 1157561 - 1157581 + g 83 -7.5 -4.65895 | GCAATCGTTCTTTCC TGCCATGGC GAC GCCGTAGCA TTTTTCCATGGCAGC TERM 1045 1157792 - 1157815 + H 70 -11 -3.01712 | overlap 1157773 1157772 TTGGAAGAAATTTTT TCAGGGCGTG TCTT CACGACCTGA TGTTGAAGCCAAGGG Pput_1031 1157917 - 1158501 + | RNA polymerase sigma factor Pput_1032 1158491 - 1159132 + | hypothetical protein Pput_1033 1160399 - 1159194 - | sodium/glutamate symporter Pput_1034 1162035 - 1160527 - | transcriptional regulator, TyrR Pput_1035 1162556 - 1162188 - | hypothetical protein TERM 1046 1162605 - 1162583 - R 73 -8.3 -4.14392 | opp_overlap 1162581, overlap 1162584 TTGGAAGGTCGAAAA TGGCGGGCC GCGTA AGCCCGCCG ACTGCATTCAACGGT TERM 1047 1162604 - 1162584 - R 74 -11.8 -3.08314 | opp_overlap 1162581, overlap 1162583 TGGAAGGTCGAAAAT GGCGGGCC GCGTA AGCCCGCC GACTGCATTCAACGG Pput_1036 1163542 - 1162613 - | carbamate kinase TERM 1048 1163587 - 1163610 + r 75 -11 -3.53444 | opp_overlap 1163563 1163565 CTGCGCTCGGACCGC CCCGCTCC CCGGTGTA GGAGCGGG TTTACCCGCGAATGC Pput_1037 1164738 - 1163728 - | ornithine carbamoyltransferase Pput_1038 1166061 - 1164808 - | arginine deiminase Pput_1039 1167522 - 1166095 - | arginine/ornithine antiporter Pput_1040 1167944 - 1169386 + | arginine/ornithine antiporter Pput_1041 1169779 - 1169366 - | hypothetical protein Pput_1042 1170427 - 1169834 - | heme oxygenase TERM 1049 1170521 - 1170495 - R 93 -6.5 -5.58454 | opp_overlap 1170494 GGGACAGTAAAAAAA GCCGGTATTTG TGTTG CCAGTACCGGC CTCTTCGCGGGTAAA Pput_1043 1173237 - 1170649 - | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TERM 1050 1171747 - 1171777 + g 73 -6.9 -4.3534 | opp_overlap 1171727 1171747, overlap 1171765 TCCTACGGTCAAGCA GGT-ACCGGTACCGC TGC GCGA-ACCGGTGACC TTTTCGTGCTTGAGC Pput_1044 1174325 - 1173363 - | anti-FecI sigma factor, FecR Pput_1045 1174926 - 1174414 - | ECF subfamily RNA polymerase sigma-24 factor Pput_1046 1176251 - 1175301 - | transposase, IS111A/IS1328/IS1533 TERM 1051 1176537 - 1176494 - R 95 -16.8 -3.55071 | gap 1, opp_overlap 1176478 1176531 CGATAGGGCCGCAAA GCGGCCCCAGCAATCTATGCA TGA TGCGGAGATC-CTGGGGCCGC TGCACGGCCCTTTCG TERM 1052 1176531 - 1176547 + r 72 -10.8 -3.53012 | opp_overlap 1176494 GATGCGGAGATCCTG GGGCCG CTGCA CGGCCC TTTCGCGACGCAAGG Pput_1047 1177631 - 1176630 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 1053 1178732 - 1178705 - g 73 -12.7 -3.21416 | GACGCGCATGACCAA GGCCAGCGGCA GCTTCA TGCCGCTGGGC GAAATCGTCGACGAG TERM 1054 1179593 - 1179639 + G 78 -14.2 -3.10464 | opp_overlap 1179580 ACTGGCCAGCCGTGA GCTGCCGCCGGCCCCCCAGGGC AAC GACCTGGGGTGTGGGCGCGAGC TGTTCGGCTTCATGC Pput_1048 1177896 - 1179722 + | phosphogluconate dehydratase glk 1179719 - 1180678 + | glucokinase Pput_1050 1180700 - 1181482 + | two component transcriptional regulator Pput_1051 1181463 - 1182917 + | integral membrane sensor signal transduction histidine kinase Pput_1052 1183133 - 1184386 + | N-acylglucosamine 2-epimerase TERM 1055 1184982 - 1184971 - g 78 -3.6 -5.0133 | GAGGTGTTCAAAAAA GCCG GCAT CGAC AAGGCGCCTACCACC Pput_1053 1184494 - 1185780 + | extracellular solute-binding protein Pput_1054 1185914 - 1186822 + | binding-protein-dependent transport systems inner membrane component Pput_1055 1186815 - 1187660 + | binding-protein-dependent transport systems inner membrane component Pput_1056 1187664 - 1188818 + | ABC transporter related TERM 1056 1189466 - 1189497 + G 83 -11.6 -4.07133 | gap 1, opp_overlap 1189490 CGGTCAGCCAGTGGG CGCTGCGGGTGAAGT ACA ACATCACCC-CGGCG TTCTTTGTGCAGGTC Pput_1057 1188859 - 1190202 + | carbohydrate-selective porin OprB Pput_1058 1190320 - 1191174 + | aldose 1-epimerase Pput_1059 1192039 - 1191167 - | DNA-binding transcriptional regulator HexR TERM 1057 1192066 - 1192087 + H 79 -7.9 -4.58663 | opp_overlap 1192066, overlap 1192068 TGGGTCGGGAAGACA GCCGGCTGT GGGA GCAGCAGGC TTTTTGCACGGTCGT Pput_1060 1192242 - 1193711 + | glucose-6-phosphate 1-dehydrogenase Pput_1061 1193698 - 1194411 + | 6-phosphogluconolactonase Pput_1062 1194429 - 1195109 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1058 1195135 - 1195155 + F 100 -11.8 -5.66684 | TGCTTTACGGCTTAT GGGGCGCT TGGTC GGCGCCCC TTTTTTTATCCGTTG Pput_1063 1195329 - 1196048 + | hypothetical protein TERM 1059 1196744 - 1196759 + G 72 -4 -4.62475 | gap 1, opp_overlap 1196737, overlap 1196747 TTGAGAAAGCGCCAG GTGCCAG ACG CTGG-AC TTTTGATTTCTCGGT Pput_1064 1196053 - 1196781 + | hypothetical protein TERM 1060 1196822 - 1196802 - T 89 -6.8 -5.26875 | opp_overlap 1196802 1196815 GTCGTAATGAAAAAA GCCCGC ATTAAACCA GCGGGC TTTCTGCCTGTAGTG Pput_1065 1198517 - 1196844 - | 2-isopropylmalate synthase TERM 1061 1197137 - 1197156 + g 72 -2 -4.71426 | overlap 1197139 CACCGGCAACTTCCA CTTCCACA GCGC TGTGGCCG TTTTCTTCCTGCAGG Pput_1066 1199812 - 1198985 - | peptidase M23B xseA 1201207 - 1199816 - | exodeoxyribonuclease VII large subunit TERM 1062 1200003 - 1199965 - G 76 -8 -4.2828 | GTTCATCCAGCAAAA TGCTGTATCCGCGGGCCA GGG TGGCCAGCGGACTGACCA CCTGCAGTGTCTGCA TERM 1063 1200280 - 1200255 - G 71 -11.1 -3.53012 | gap 1 GCCTGCTGGCGCAAA CGCTCGCCTGGG TGA CGCAGGCG-GCG GGTGAGTGACTCCAG TERM 1064 1201308 - 1201292 - R 88 -15.1 -3.53012 | opp_overlap 1201286 CCTTGCGTCGCGAAA GGGCCGC AAC GCGGCCC CGGCACTTCATGCGG Pput_1068 1202279 - 1201401 - | LysR family transcriptional regulator Pput_1069 1202377 - 1203132 + | hypothetical protein TERM 1065 1203647 - 1203665 + G 71 -8.1 -3.86822 | gap 1 CAACAACTGGGGCGA GGCC-GGG TTCA CCCAGGCC TTTCTCGACAGCTTC Pput_1070 1203180 - 1203737 + | hypothetical protein TERM 1066 1204449 - 1204430 - g 72 -2.1 -4.72333 | gap 1, overlap 1204420 AAGGACATCGAAAAA GCCAA-GG CTTAC CCGCTGGC CAGCAAGGACGACCA TERM 1067 1205299 - 1205267 - g 74 -9.1 -3.8901 | overlap 1205270 GTGCAAATCACCAAA GAAGCCCCTAACTAC CGC GTAGGCTGAGGCTTC CAGCTACAACATAAA Pput_1071 1203824 - 1205293 + | inositol-5-monophosphate dehydrogenase TERM 1068 1205311 - 1205342 + F 77 -10.8 -3.71917 | opp_overlap 1205315, overlap 1205314 CTTCCAGCTACAACA TAAAGCGGGGCTGT CATG ACAGCCCCGCGTCG TTTCCGATTTCCACT TERM 1069 1205314 - 1205339 + F 80 -14.7 -2.9587 | opp_overlap 1205315, overlap 1205311 CCAGCTACAACATAA AGCGGGGCTGT CATG ACAGCCCCGCG TCGTTTCCGATTTCC TERM 1070 1205338 - 1205315 - f 100 -18.2 -4.28188 | opp_overlap 1205314 1205311 CAGCTACAACATAAA GCGGGGCTGT CATG ACAGCCCCGC GTCGTTTCCGATTTC guaA 1205372 - 1206949 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1071 1206993 - 1207020 + T 100 -21.4 -2.84298 | opp_overlap 1206993 1206997, overlap 1206997 ATGACCTGTAACACA CAAAGGCCCGCG TAAT CGCGGGCCTTTG TCATTCTGAGGTCTA TERM 1072 1207020 - 1206993 - T 100 -21.4 -3.08073 | opp_overlap 1206993 1206997, overlap 1206997 ATGACCTGTAACACA CAAAGGCCCGCG TAAT CGCGGGCCTTTG TCATTCTGAGGTCTA TERM 1073 1206997 - 1207016 + T 100 -16.4 -4.1021 | opp_overlap 1206993 1206997, overlap 1206993 CCTGTAACACACAAA GGCCCGCG TAAT CGCGGGCC TTTGTCATTCTGAGG TERM 1074 1207016 - 1206997 - T 100 -16.4 -4.2074 | opp_overlap 1206997 1206993, overlap 1206993 CCTGTAACACACAAA GGCCCGCG TAAT CGCGGGCC TTTGTCATTCTGAGG Pput_1073 1208141 - 1207074 - | ADP-ribosyl-(dinitrogen reductase) hydrolase Pput_1074 1209613 - 1208138 - | hypothetical protein TERM 1075 1210161 - 1210129 - g 78 -14.2 -3.01712 | gap 2, opp_overlap 1210154 TGCCGGGCTTCAAGA CCGAGGCC--TGGGCC TTC GGCCCATCGGCCCCGG GCACCGAGCTGCGCG Pput_1075 1209954 - 1211333 + | multicopper oxidase, type 3 Pput_1076 1211333 - 1211812 + | CMP/dCMP deaminase, zinc-binding TERM 1076 1211839 - 1211878 + T 70 -10 -3.53012 | CTCTTCGCGGGCAAG CCCACTCCTACAGGTTCT GCGC AAATCTTGTAGGCGTGGG TTTGCCCGCGAAGAG Pput_1077 1213361 - 1211904 - | lytic transglycosylase, catalytic TERM 1077 1212577 - 1212603 + g 78 -3.1 -5.00642 | gap 2, overlap 1212568 1212576 1212576 ACATGGCCGTAGTAG CGGT-C-CTTCAA GCG TTGAAGGGTGCCG TTTTTCTGTGCCTTG TERM 1078 1212847 - 1212858 + g 76 -5.8 -4.62069 | TCCTCATATTGCAAG GCAG GGTA CTGC TTTTTCAGCTCGGCC TERM 1079 1213484 - 1213519 + H 89 -17.7 -3.01712 | opp_overlap 1213486, overlap 1213486 GTGCCCGGTTTGAGA CATTCAGCGCCTGGG CGATCT CACAGGCGCTGAATG TGTTGAACCGGACAC TERM 1080 1213517 - 1213486 - H 79 -14.5 -2.87132 | opp_overlap 1213484 1213486 GCCCGGTTTGAGACA TTCAGCGCCTGGG CGATCT CACAGGCGCTGAA TGTGTTGAACCGGAC TERM 1081 1213486 - 1213517 + H 81 -14.5 -3.06696 | opp_overlap 1213486, overlap 1213484 GCCCGGTTTGAGACA TTCAGCGCCTGGG CGATCT CACAGGCGCTGAA TGTGTTGAACCGGAC TERM 1082 1214691 - 1214650 - g 73 -12.9 -3.16055 | gap 1 GAAATCCGCGACGAA GGTGCGACCGGCCGTGGCGC CAA GC-CCAAGGCCGGCCTGACC GGCTTCACCGTGTCC TERM 1083 1215909 - 1215882 - g 72 -7.7 -4.18018 | TTCGCGCATCGAAAA GCTGTCCGACA TCAAAC TGTCGGCCAAC TGGATGTCCGCGGCT Pput_1078 1213699 - 1217598 + | phosphoribosylformylglycinamidine synthase Pput_1079 1217602 - 1217913 + | hypothetical protein Pput_1080 1218778 - 1218017 - | Sec-independent protein translocase, TatC subunit TERM 1084 1218441 - 1218421 - G 80 -5.3 -4.84311 | overlap 1218436 CGGCATAGAACAAAA CGATGCTCG ATA CCAGCAGCG GCAGGGCAATGCGCC TERM 1085 1218628 - 1218614 - G 78 -7 -4.56597 | overlap 1218616 GCCTTCCGGCAAAAA GCGCCG TAG CGGCTC GGATATGAGCGTGTA Pput_1081 1219065 - 1218775 - | twin-arginine translocation protein, TatB subunit Pput_1082 1219298 - 1219065 - | twin arginine-targeting protein translocase Pput_1083 1219444 - 1220409 + | general secretion pathway protein K Pput_1084 1222614 - 1220539 - | hypothetical protein TERM 1086 1223426 - 1223442 + G 70 -8 -4.07568 | opp_overlap 1223412 ACGCCAGGCACTGGG CGTGCA AGCCC TGCACG TTTTCGAGCGCGGCG TERM 1087 1223936 - 1223892 - g 80 -15 -3.22223 | gap 2, opp_overlap 1223927 CAACTGCACCAGCAA CGGGCCGGCCATGCGGCCTGGC TCG ACCA-GCCGC-TGGCCCGCGCG CCCCAGGCCTTGTGG TERM 1088 1224375 - 1224334 - g 81 -13.7 -3.66178 | gap 1 GCCTGCAATTCGAAA GCCAGGCCGGCGAGCCACTG TGG CAGCGGGTCGA-AGCCTGGC TGGCCCGTCAGCCTG Pput_1085 1222839 - 1224479 + | lipoprotein UxpA TERM 1089 1224796 - 1224821 + G 70 -7.5 -4.07568 | overlap 1224797 1224799 GCCAGGGATCGTGCT GCAGGACATCG ACAG CGATGGCCTGA TTTTCAACAACCAGG TERM 1090 1224859 - 1224832 - g 77 -12.6 -3.63515 | overlap 1224835 CCTGATTTTCAACAA CCAGGGGCGGCG TGAG CGCCTGCCCTGG CCGCCACGCCCCGCC Pput_1086 1224479 - 1224901 + | hypothetical protein Pput_1087 1224905 - 1226659 + | general secretion pathway protein D Pput_1088 1226659 - 1228107 + | type II secretion system protein E TERM 1091 1228746 - 1228773 + G 73 -11.2 -3.61398 | GCTGATCGGCCTGAG CCAGGGGCTGGT GCAC GCCGGGCCCTGG TTGTTAGGGGGGGCG Pput_1089 1228111 - 1229313 + | general secretion pathway protein F Pput_1090 1229331 - 1229765 + | general secretion pathway protein G Pput_1091 1229768 - 1230199 + | general secretion pathway protein H Pput_1092 1230196 - 1230564 + | type II secretion system protein I/J Pput_1093 1230561 - 1231151 + | hypothetical protein Pput_1094 1231148 - 1232224 + | general secretion pathway protein L Pput_1095 1232221 - 1232607 + | hypothetical protein Pput_1096 1232604 - 1233266 + | hypothetical protein TERM 1092 1233365 - 1233407 + T 71 -7.4 -4.14392 | TATCGATGGTGCATA CCCGCGAAGCAGGCGGCGCG TTG CGTGGCACTGGCTGCGCCGG TTTTCGCGGTTGAAC Pput_1097 1234321 - 1233560 - | FAD-binding 9, siderophore-interacting domain-containing protein TERM 1093 1233645 - 1233667 + g 74 -4.8 -4.56597 | opp_overlap 1233644 TTCTCCAGCAACAAC GCCTTGGC CTGGCGA GTCAGGGC TTTTTCCAGCGCCAC Pput_1098 1234859 - 1234314 - | PadR-like family transcriptional regulator TERM 1094 1234493 - 1234505 + g 74 -10.5 -3.74872 | GCGGGCGGTCGTGGC CGCGC AGG GCGCG TTTGCTGACCTCGAT Pput_1099 1238098 - 1234949 - | membrane carboxypeptidase (penicillin-binding protein)-like protein TERM 1095 1236709 - 1236746 + g 72 -4 -4.63527 | gap 1, opp_overlap 1236731 1236732, overlap 1236710 GCAGCCGCTCGCCGA TCAGGCCGATCTGTGCG GCAAA CGC-CGGGTCGGCAAGG TTTTTCAGGTACTGG TERM 1096 1237322 - 1237344 + g 71 -5.5 -4.36914 | overlap 1237323 CTGGTAGGCACGCAC GCTGGCAGA AATCA TCTGCCGGA TTTTCTCCGCGCCCG TERM 1097 1238649 - 1238635 - g 73 -11.4 -3.66874 | opp_overlap 1238630 1238635 CCAAGGCGATCGAAA TGGCCG GTC CGGCCA TCATGTTGTCCTACA Pput_1100 1238487 - 1239905 + | amino acid permease-associated region TERM 1098 1239911 - 1239936 + T 93 -16.9 -3.48276 | gap 1, opp_overlap 1239897 AGCCTCCTGACCTGA CG-TGGGGCCGC TTT GCGGCCCCAGCG TTCTCTCAGGCCGCC Pput_1101 1241561 - 1239942 - | glutamate synthase (NADPH) Pput_1102 1246124 - 1241844 - | DEAD/DEAH box helicase domain-containing protein TERM 1099 1245503 - 1245513 + g 74 -4.6 -4.56775 | overlap 1245501 CGGACAGGCCGATCC GCCG CAG TGGC TTTTTGCACAAGGCT TERM 1100 1245968 - 1245946 - G 71 -5.6 -4.3898 | gap 1, overlap 1245947 1245948 AGCACGGCCAGAAAA GCGCTCAGG GTCTTG CCTGAGC-C GGTCGGTGCGGCCAG TERM 1101 1246213 - 1246238 + H 76 -3.9 -4.86731 | gap 1, opp_overlap 1246192 1246188 1246216, overlap 1246217 1246224 GCCTTGTCAGGCCAA TGACCC-CATGG GAT CCTCGCGGGTCA TTTTATTTAGCGAGC Pput_1103 1246261 - 1246674 + | NUDIX hydrolase Pput_1104 1247575 - 1246658 - | LysR family transcriptional regulator TERM 1102 1248294 - 1248322 + G 76 -13.7 -3.19157 | overlap 1248302 TGTCCAGTTCAGGGG CGGCGGGGCTGCC GGC GCCGGCCCCGGCG TTGGTGCAGTTGCTG Pput_1105 1247771 - 1248766 + | alpha/beta hydrolase fold Pput_1106 1249219 - 1248884 - | GlpM family protein Pput_1107 1250571 - 1249243 - | two component, sigma54 specific, Fis family transcriptional regulator Pput_1108 1252472 - 1250568 - | integral membrane sensor signal transduction histidine kinase TERM 1103 1252238 - 1252261 + g 76 -10.4 -3.84451 | CCAGCTCCAGCAGGC TCGGCAAGTA GGTG TACTTGCTGA TTTCGCTTTCGACCG Pput_1109 1253275 - 1252541 - | ABC transporter related Pput_1110 1253943 - 1253272 - | polar amino acid ABC transporter, inner membrane subunit Pput_1111 1254690 - 1253944 - | polar amino acid ABC transporter, inner membrane subunit Pput_1112 1255753 - 1254836 - | extracellular solute-binding protein TERM 1104 1256986 - 1257003 + G 95 -10.5 -4.58283 | overlap 1257000 GGTAAGCGCTTCCGT GCGCCGG CCTA TCGGCGC TTTTTCGCGCGCTTC TERM 1105 1257737 - 1257717 - g 76 -12.5 -3.4252 | TGTGATGGAGCAGAA TGGCGCCGG CGG CTGGCGCCA CGAACTGGAAGCTCC Pput_1113 1256086 - 1260405 + | leucine-rich repeat-containing protein glpD 1261971 - 1260433 - | glycerol-3-phosphate dehydrogenase TERM 1106 1261811 - 1261836 + g 74 -4.7 -4.56597 | gap 1 AGTTTGCTGCTGGCT GACGACGTGTGT TGG GC-CAGGTCGTC TTTTTCGCAAAGGAA Pput_1115 1263124 - 1262264 - | DeoR family transcriptional regulator glpK 1264620 - 1263121 - | glycerol kinase TERM 1107 1263297 - 1263311 + g 70 -12.8 -2.91322 | opp_overlap 1263295 1263271, overlap 1263294 GGCCTGCCAGATAGG CGGCGC CCA GCGCCG TGGTTTCGCGCATCT TERM 1108 1264320 - 1264331 + g 70 -7.2 -3.9941 | opp_overlap 1264309 CAATGGCGTTGTACA CCGG GCGT CCGG TTTCCTTGTCCCACA Pput_1117 1265523 - 1264672 - | MIP family channel protein TERM 1109 1265601 - 1265574 - H 83 -9.8 -4.34402 | opp_overlap 1265574 CGCTCGACAGCAAAA CCCGGTGTCTAT CCCC ATTGACCCCGGG TGATGTAGGAAATGC Pput_1118 1265826 - 1266296 + | ybaK/ebsC protein TERM 1110 1266333 - 1266373 + T 95 -18.4 -3.50447 | gap 1, opp_overlap 1266333 CCAATCGCGACACAA GGCCGC-CCCACAGGAGTT CTCG ATTTCCTGTGGGAGCGGCC TTGTGTCGCGATTGG TERM 1111 1266373 - 1266333 - T 93 -16.3 -3.50447 | gap 1, opp_overlap 1266333 CCAATCGCGACACAA GGCCGC-CCCACAGGA GTTCTCGATT TCCTGTGGGAGCGGCC TTGTGTCGCGATTGG Pput_1119 1267526 - 1266417 - | ABC transporter related TERM 1112 1266915 - 1266973 + g 72 -7.3 -4.13014 | gap 1, opp_overlap 1266902 1266927 1266928 1266957 GACGCCAACCTGGTC GCTGACGGCAAAGGCTTCTTCCTGGTCA TGGG TGACCAGAATGGCGCTGGTGCCG-CGGC TTTTGAGAATATCGC Pput_1120 1268443 - 1267523 - | ornithine carbamoyltransferase TERM 1113 1269470 - 1269482 + GH 74 -7.7 -4.24342 | GCGAAACGGCGGCAA TGGCT GAC AGCCA TTTGTTCATACGCCC Pput_1121 1268818 - 1270926 + | molydopterin dinucleotide-binding region TERM 1114 1270962 - 1270931 - gT 71 -11.6 -3.14211 | gap 1, opp_overlap 1270938 AGGCCGCTTGAGGAA CGGCAAGGCCGAGCA CGG CGCTCGGC-TTTCCG ATACAATGCGACACC TERM 1115 1270938 - 1270956 + GT 77 -11.7 -3.60627 | opp_overlap 1270931 TTGAGGAACGGCAAG GCCGAGC ACGGC GCTCGGC TTTCCGATACAATGC Pput_1122 1270895 - 1271353 + | glutaredoxin-like protein TERM 1116 1271400 - 1271366 - T 100 -18.9 -3.53444 | opp_overlap 1271376, overlap 1271376 TGATCTTCCGGCAAA CATAAAAAAACCCGC GATCA GCGGGTTTTTTTATG GGGCGAATAGTTACT TERM 1117 1271376 - 1271390 + T 95 -8.5 -5.60993 | opp_overlap 1271366 1271376 GCAAACATAAAAAAA CCCGC GATCA GCGGG TTTTTTTATGGGGCG TERM 1118 1271390 - 1271376 - T 100 -8.5 -5.88197 | opp_overlap 1271376, overlap 1271366 GCAAACATAAAAAAA CCCGC GATCA GCGGG TTTTTTTATGGGGCG Pput_1123 1271884 - 1271411 - | bacterioferritin TERM 1119 1272066 - 1272050 - R 100 -9.4 -5.60993 | opp_overlap 1272050 GCGGGCATAAAAAAA CCGGAC ACCAG GTCCGG TTCTTGAAATTCTGC Pput_1124 1272302 - 1272084 - | BFD/(2Fe-2S)-binding domain-containing protein TERM 1120 1272395 - 1272409 + H 80 -11.4 -3.86015 | GGGTGCTGTGCTTGA GCGACC GGT GGTCGC TTTGTCGACGGAGTC Pput_1125 1272527 - 1273129 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1121 1273138 - 1273178 + T 91 -17.8 -3.25942 | opp_overlap 1273150, overlap 1273139 1273150 GCTGTAATTGCTGCG TGCATGAAAAAACCGGCC TTCGT GGCCGGTTTTTTTATGCC TTCCTGTGCCGGCCT TERM 1122 1273139 - 1273177 + T 100 -21.3 -2.55351 | opp_overlap 1273150, overlap 1273138 1273150 CTGTAATTGCTGCGT GCATGAAAAAACCGGCC TTCGT GGCCGGTTTTTTTATGC CTTCCTGTGCCGGCC TERM 1123 1273150 - 1273166 + T 100 -10.8 -5.66684 | opp_overlap 1273150, overlap 1273139 1273138 GCGTGCATGAAAAAA CCGGCC TTCGT GGCCGG TTTTTTTATGCCTTC TERM 1124 1273166 - 1273150 - T 100 -10.8 -5.14563 | opp_overlap 1273150 1273139 1273138 GCGTGCATGAAAAAA CCGGCC TTCGT GGCCGG TTTTTTTATGCCTTC Pput_1126 1273963 - 1273289 - | ribonuclease T Pput_1127 1275006 - 1273960 - | dihydroorotase Pput_1128 1275137 - 1276078 + | OmpA/MotB domain-containing protein Pput_1129 1276671 - 1277888 + | argininosuccinate synthase TERM 1125 1277908 - 1277925 + T 100 -9.8 -5.60993 | opp_overlap 1277908, overlap 1277891 TGGTGTGTGCGAAAA CCCCGG CTTAGT CCGGGG TTTTTTTATGCCCGC TERM 1126 1277925 - 1277908 - T 79 -9.8 -4.07568 | opp_overlap 1277891 1277908 TGGTGTGTGCGAAAA CCCCGG CTTAGT CCGGGG TTTTTTTATGCCCGC Pput_1130 1278438 - 1277956 - | hypothetical protein Pput_1131 1278720 - 1279430 + | two component LuxR family transcriptional regulator TERM 1127 1279446 - 1279462 + T 71 -9.4 -3.74251 | TCGCCAAGCCTTGAA GCCTCC AGCCA GGAGGC TTTGCTAAGGCTATG Pput_1132 1279677 - 1279501 - | hypothetical protein Pput_1133 1280789 - 1279782 - | endonuclease III Pput_1134 1281544 - 1280942 - | electron transport complex, RnfABCDGE type, G subunit Pput_1135 1282512 - 1281541 - | electron transport complex, RnfABCDGE type, D subunit Pput_1136 1283057 - 1282509 - | NADH:ubiquinone oxidoreductase subunit RnfA-like protein TERM 1128 1282832 - 1282814 - G 70 -7.3 -4.08767 | GCCACTTGGCCAAAA GCCAGGG CAGGC CCCAGGC GAGCAAAGCCAGCCA metG 1285296 - 1283164 - | methionyl-tRNA synthetase TERM 1129 1284793 - 1284807 + g 76 -5.6 -4.59773 | CTTGATGAAGCGGTC GGCAAG GAA CATGCC TTTTTCCGGGTCGAA Pput_1138 1285362 - 1286456 + | hypothetical protein TERM 1130 1286554 - 1286538 - T 88 -15.1 -3.53012 | opp_overlap 1286548 CCTGGCGTCGCGAAA GGGCCGC GCA GCGGCCC CAGGATCTCGGCATA TERM 1131 1286548 - 1286591 + T 95 -16.8 -3.56594 | gap 1, opp_overlap 1286538, overlap 1286585 CGAAAGGGCCGCGCA GCGGCCCCAG-GATCTCGGCA TAA TGCATAGATTGCTGGGGCCGC TTTGCGGCCCTTTCG TERM 1132 1286585 - 1286601 + T 88 -15.1 -3.53012 | overlap 1286548 ATGCATAGATTGCTG GGGCCGC TTT GCGGCCC TTTCGCGACACAAGG TERM 1133 1286677 - 1286662 - T 100 -11.8 -5.65177 | opp_overlap 1286662 ACAGGCATAAAAAAA CCCGCC AGAA GGCGGG TTTTTTTGAAAGCTA TERM 1134 1286662 - 1286677 + T 100 -11.8 -5.41143 | opp_overlap 1286662 ACAGGCATAAAAAAA CCCGCC AGAA GGCGGG TTTTTTTGAAAGCTA Pput_1139 1286917 - 1286708 - | cold-shock DNA-binding domain-containing protein dcd 1287245 - 1287811 + | deoxycytidine triphosphate deaminase TERM 1135 1287820 - 1287839 + F 71 -12.1 -2.74144 | opp_overlap 1287820, overlap 1287819 TACCTGAGCCGACAA GCGCGGG GAATTA CCCGCGC CTTTGGCACTCCAAC TERM 1136 1287839 - 1287820 - f 77 -12.1 -3.33162 | opp_overlap 1287820 1287819 TACCTGAGCCGACAA GCGCGGG GAATTA CCCGCGC CTTTGGCACTCCAAC TERM 1137 1287863 - 1287887 + F 85 -12.9 -3.72576 | opp_overlap 1287863 1287862 CTCCAACGAAGTAAC GCCGGTGTGCA TGA TGTACATCGGC TTTCGTCAGGAGCAG Pput_1141 1287906 - 1288133 + | hypothetical protein TERM 1138 1288153 - 1288198 + T 77 -13.9 -2.90813 | gap 1, opp_overlap 1288146, overlap 1288149 CGCTAAAGCGGCCAG ACGCGGTCAGCGCCAGCCAGGT ACA GCC-GGCTGGCGCTGGCGGGGG TGATTTCCCACCCTC Pput_1142 1288790 - 1288140 - | ICC-like protein putative phosphoesterase Pput_1143 1291237 - 1288787 - | DEAD/DEAH box helicase domain-containing protein Pput_1144 1292420 - 1291305 - | succinylglutamate desuccinylase/aspartoacylase Pput_1145 1294192 - 1292534 - | ATP-dependent DNA ligase Pput_1146 1295205 - 1294189 - | exonuclease of the beta-lactamase fold involved in RNA processing-like protein Pput_1147 1297773 - 1295332 - | penicillin amidase TERM 1139 1295746 - 1295776 + g 73 -8.2 -4.01454 | CCCGGCCTCCATTGC GCCCGCCAGGCT GCGGGCG AGGATGGCGGGC TTGTCTTCTTTTTGC TERM 1140 1296019 - 1296037 + g 72 -11.6 -3.31144 | opp_overlap 1296007, overlap 1296031 GAAGGCCTTGAGACG GGCCAGCG TGT CGCGGGCC TTGTCGCGCTGCCCG TERM 1141 1296490 - 1296462 - G 78 -10.4 -4.07885 | gap 1, opp_overlap 1296462 1296471, overlap 1296463 CAGGCTCGGCGAAAA CGAAGTTGACGGC AGCA GCCGTC-ACTTCA CGTGTGCTGTCGAAG TERM 1142 1296586 - 1296604 + g 95 -10.2 -4.42386 | CTGGGGCAGGTTCAG CGCCAGGC CCA GGCTGGCG TTTTCTGGCTGGGCC Pput_1148 1299217 - 1297877 - | GntR family transcriptional regulator TERM 1143 1298699 - 1298662 - G 76 -7.7 -4.25104 | opp_overlap 1298644, overlap 1298698 GCTCGTCGACGAAAA CGTGGTCGCCCGGTT TGATCAGC AACCGTGCAACCAGG TCCAGGCCTTGCGTG TERM 1144 1299166 - 1299181 + g 76 -10.4 -3.9122 | opp_overlap 1299164 GCCCGGGCAACCACT CGCCTG CATC CAGGCG TTGTTTCAAAAGGTG Pput_1149 1299399 - 1300103 + | Serine O-acetyltransferase Pput_1150 1300100 - 1300888 + | synthetase, putative TERM 1145 1301915 - 1301926 + G 76 -5.8 -4.57569 | AGGGCAAGAACGACC TGGC CATT GCCA TTTTTGCCACCCTCG Pput_1151 1300885 - 1302096 + | major facilitator transporter Pput_1152 1302093 - 1302995 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Pput_1153 1303360 - 1303163 - | SecC motif-containing protein Pput_1154 1303871 - 1303368 - | water stress/hypersensitive response protein Pput_1155 1304320 - 1303844 - | hypothetical protein Pput_1156 1304817 - 1304323 - | hypothetical protein TERM 1146 1305080 - 1305053 - g 85 -6.2 -5.0133 | gap 1, overlap 1305068 CAGGTTTGCAAAAAA CCGACTGGCCGAA ATG TGCCGCC-GTCGG GGGTGTAGGCGGCGC Pput_1157 1304977 - 1305669 + | OmpA/MotB domain-containing protein TERM 1147 1305676 - 1305711 + F 81 -14.7 -3.14132 | gap 1, opp_overlap 1305660 1305672, overlap 1305677 CAGCGGTAAGACGGC GG-GCGCCCGTGCCTC GAGCA GTGGCACGGGCGCGTC TTCATGCCGGCCAGC TERM 1148 1305677 - 1305709 + F 85 -16.2 -3.13403 | opp_overlap 1305660 1305672, overlap 1305676 AGCGGTAAGACGGCG GGCGCCCGTGCCTC GAGCA GTGGCACGGGCGCG TCTTCATGCCGGCCA TERM 1149 1305929 - 1305975 + G 81 -10.6 -4.15044 | overlap 1305932 CATCGAGAGTTCTTC CTGGGCTGCCGGTGGCGGCGCC TTG GGTGCCATCGCCGGCGGGCTGA TTTGTTACGCCCAGG TERM 1150 1305932 - 1305972 + G 84 -16.7 -3.10244 | overlap 1305929 CGAGAGTTCTTCCTG GGCTGCCGGTGGCGGCGCC TTG GGTGCCATCGCCGGCGGGC TGATTTGTTACGCCC Pput_1158 1305759 - 1306478 + | OmpA/MotB domain-containing protein Pput_1159 1306577 - 1306852 + | hypothetical protein TERM 1151 1306927 - 1306911 - T 71 -11.5 -3.14132 | opp_overlap 1306910 1306921, overlap 1306913 GGGCTTGCCCACGAA CACCGGC AAC GCCGGCG CCATGCACCGTGGCA TERM 1152 1306955 - 1306913 - T 74 -11.8 -3.13403 | opp_overlap 1306910 1306921, overlap 1306911 GCTTGCCCACGAACA CCGGCAACGCCGGCGCCATG CAC CGTGGCACCGGCTTCGCTGC AGGTTTCACGCAGCG TERM 1153 1306921 - 1306947 + T 85 -15.8 -3.07307 | opp_overlap 1306911 1306913, overlap 1306910 ACGAACACCGGCAAC GCCGGCGCCATG CAC CGTGGCACCGGC TTCGCTGCAGGTTTC Pput_1160 1307439 - 1306975 - | hypothetical protein TERM 1154 1308663 - 1308653 - g 88 -8.2 -4.75174 | CATCGAACTGAAAAA GGGC TTT GCCC GACTCAACGATCTGT TERM 1155 1308865 - 1308845 - g 71 -12.5 -3.06315 | opp_overlap 1308858, overlap 1308847 CGAAGACCCGGAAGA CAGCCCGCC CAT GGCGCGCTG GCTGACGTTGGCCGA TERM 1156 1309344 - 1309358 + G 70 -10 -3.59979 | CGGGTCGACGATGGC CAGCAC AGC GTGCTG TTTGGCCTGGCCAGC dinG 1307538 - 1309682 + | ATP-dependent DNA helicase DinG TERM 1157 1309819 - 1309856 + G 71 -12.8 -3.10343 | overlap 1309819 AGTTCGCCCTTGCTG GCCGGGCAGCA-GACGCT GTTC AGCTTCGTGC-GCCCGGC TTCGGTGGTCAATGT TERM 1158 1310781 - 1310760 - g 79 -10.9 -3.89354 | gap 1 TGGCGAAAGCAACAA CGACGATGGC AAT GCC-TCGTCG CAAGGGCGCAATTTC TERM 1159 1311693 - 1311714 + G 84 -15.1 -3.28712 | GTCCGAGTTCCAGTT CGGCTCGCG TGAT CGCGGGCCG TTCTGGCCGGGGCCA Pput_1162 1309762 - 1311996 + | Beta-agarase Pput_1163 1312007 - 1313275 + | beta-lactamase TERM 1160 1314282 - 1314272 - g 90 -2.4 -5.4833 | overlap 1314274 GCAGCCAAGAAAAAA GCTG CGC CGGC CAAGCCTGCCGCCAA Pput_1164 1313375 - 1314352 + | OmpA/MotB domain-containing protein Pput_1165 1314372 - 1315019 + | pyridoxamine 5'-phosphate oxidase TERM 1161 1315046 - 1315024 - T 100 -20.6 -3.14132 | opp_overlap 1315021 TGGCGCCCTGAGCAA CTGGGGCCGC CAA GCGGCCCCAG CCATTGATCAAGCTA Pput_1166 1315292 - 1315059 - | hypothetical protein Pput_1167 1315440 - 1315904 + | 17 kDa surface antigen TERM 1162 1315957 - 1315921 - T 90 -12.4 -4.26903 | gap 1, opp_overlap 1315926, overlap 1315926 CGTAGTGCAGTAAAA CAAAACCCCGACATGGC TGAT GCC-CGTCGGGGTTTTT TCATGCTTCAGCCAA TERM 1163 1315926 - 1315952 + T 100 -10.1 -5.2189 | gap 1, opp_overlap 1315921 1315926 TGCAGTAAAACAAAA CCCCGACATGGC TGAT GCCC-GTCGGGG TTTTTTCATGCTTCA TERM 1164 1315952 - 1315926 - T 100 -12.3 -5.13722 | gap 1, opp_overlap 1315926, overlap 1315921 TGCAGTAAAACAAAA CCCCGACATGGC TGAT GCC-CGTCGGGG TTTTTTCATGCTTCA Pput_1168 1317167 - 1315974 - | Na+/H+ antiporter NhaA TERM 1165 1316466 - 1316448 - G 72 -8 -4.18494 | CAGCGGGATGCAAAA GGCCAGGG CGA CACCGGCC AAGGTGGCATGCACG TERM 1166 1317408 - 1317369 - R 93 -16.4 -3.53012 | opp_overlap 1317369 CCTTTCGCGGGTAAA CCCGCTCCTACAGGGGGC CATT GTTCCGTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 1167 1317369 - 1317408 + r 100 -20.8 -3.53012 | opp_overlap 1317369 CCTTTCGCGGGTAAA CCCGCTCCTACAGGGGGC CATT GTTCCGTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_1169 1319076 - 1317445 - | FAD dependent oxidoreductase Pput_1170 1319830 - 1319156 - | membrane protein-like protein TERM 1168 1319897 - 1319910 + r 100 -9.5 -4.8622 | opp_overlap 1319897 TGCGGGCAGAAAAAA GGGCC CGAA GGCCC TTTTTCATTCAACCC TERM 1169 1319910 - 1319897 - R 100 -9.5 -5.24129 | opp_overlap 1319897 TGCGGGCAGAAAAAA GGGCC CGAA GGCCC TTTTTCATTCAACCC Pput_1171 1320620 - 1319919 - | ABC transporter related livG 1321388 - 1320621 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 1322641 - 1321385 - | leucine/isoleucine/valine transporter permease subunit Pput_1174 1323561 - 1322638 - | inner-membrane translocator TERM 1170 1323723 - 1323695 - R 91 -11.8 -4.43189 | gap 1, overlap 1323685 1323699 ATGAACCTCATAAAA CGAAGCCCACTGC TCGC ACAGTGGGC-TCG TAGGTCAGCTATTAG TERM 1171 1323720 - 1323699 - R 83 -12.3 -3.75517 | overlap 1323695 ACCTCATAAAACGAA GCCCACTGC TCGC ACAGTGGGC TCGTAGGTCAGCTAT Pput_1175 1324862 - 1323747 - | extracellular ligand-binding receptor TERM 1172 1324134 - 1324145 + g 73 -3.6 -4.72986 | CGGACCCATGAACTT GGCT TTCA GGCC TTTTTCCTGAGCCTG TERM 1173 1324284 - 1324298 + g 71 -5.6 -4.30987 | opp_overlap 1324284 1324283 CAGGCCTTCAAAGAC GGCAAC CTT GGTGCC TTTCTTCTCAAGGGT TERM 1174 1325004 - 1325045 + H 80 -11.7 -3.80858 | gap 1, overlap 1325006 TACCGGTACAGTGTA GA-GCGCTGTTCGAGCGCTT GAA AAGCGGTCGAAAAGTGCGTC TTTCCTGCGTTGTCG TERM 1175 1325006 - 1325042 + H 78 -14.5 -2.68381 | overlap 1325004 CCGGTACAGTGTAGA GCGCTGTTCGAGCGCTT GAA AAGCGGTCGAAAAGTGC GTCTTTCCTGCGTTG Pput_1176 1325223 - 1325534 + | hypothetical protein Pput_1178 1328778 - 1326514 - | diguanylate cyclase/phosphodiesterase Pput_1177 1325727 - 1326614 + | 3-hydroxyisobutyrate dehydrogenase TERM 1176 1327703 - 1327679 - GT 76 -7.8 -4.25104 | opp_overlap 1327695 TCGTCGCCACCAAAA CGCGCAACCA GGTCG TGGCTGCGGG TAGCGGCCTTGATGT Pput_1179 1331901 - 1329055 - | ATP-dependent helicase HepA TERM 1177 1329765 - 1329794 + g 71 -9.3 -3.71873 | gap 1 TCTCGGAATGGTCTT CGCTGT-CGATGCC GAA GGCGTCGAACAGGG TTTCCATGTAGATCG Pput_1180 1332052 - 1332747 + | hypothetical protein Pput_1181 1332811 - 1333140 + | hypothetical protein Pput_1182 1333208 - 1333369 + | hypothetical protein Pput_1183 1333505 - 1333621 + | hypothetical protein TERM 1178 1333653 - 1333672 + F 100 -9.2 -5.81412 | overlap 1333654 GCACGCAAGGCATTT AGGGCGAC TTCG GTCGCCCA TTTTTTTTGCCTGCA TERM 1179 1333654 - 1333671 + F 91 -12.7 -4.07763 | overlap 1333653 CACGCAAGGCATTTA GGGCGAC TTCG GTCGCCC ATTTTTTTTGCCTGC Pput_1184 1333827 - 1335815 + | fusaric acid resistance protein region Pput_1185 1335802 - 1336008 + | hypothetical protein Pput_1186 1336021 - 1336890 + | secretion protein HlyD family protein TERM 1180 1337021 - 1337002 - f 77 -2.8 -5.1675 | gap 1, opp_overlap 1337003, overlap 1337003 1337004 GCAGGCACGAAAAAA CTTGGCGAA CGG CCCGCCA-G TTGCGTTAGGCTGCC Pput_1187 1337114 - 1337452 + | hypothetical protein Pput_1188 1340052 - 1337467 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 1181 1338842 - 1338824 - G 76 -8.8 -4.11216 | overlap 1338825 GCGGTACCCCGAAAA CCGATGGC CTT GCCATCGC GCCAGATAGCGCGGG TERM 1182 1339406 - 1339431 + g 73 -8.9 -4.08485 | overlap 1339402 TGCATGCCCGTCAGG CCGGCGCCGTT GCCC AACTGCGCCAG TTTGCTTTCGGTGAG Pput_1189 1341177 - 1340104 - | diguanylate cyclase Pput_1190 1342355 - 1341459 - | formate/nitrate transporter TERM 1183 1344644 - 1344606 - H 71 -9 -3.73775 | opp_overlap 1344606 1344607, overlap 1344607 1344614 TGTACCTTGATCAAA CTCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGAC TTTTGTCAGATCGTT TERM 1184 1344606 - 1344644 + H 91 -11.2 -4.41206 | opp_overlap 1344606 1344607 1344614, overlap 1344607 TGTACCTTGATCAAA CTCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGAC TTTTGTCAGATCGTT TERM 1185 1344643 - 1344607 - H 74 -12.5 -2.84051 | opp_overlap 1344607 1344606, overlap 1344606 1344614 GTACCTTGATCAAAC TCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGA CTTTTGTCAGATCGT TERM 1186 1344607 - 1344643 + H 83 -14.7 -3.24 | opp_overlap 1344606 1344607 1344614, overlap 1344606 GTACCTTGATCAAAC TCAGAAATGAGCATTCG CTT CGAATGTTGATTTCTGA CTTTTGTCAGATCGT TERM 1187 1347979 - 1348017 + H 100 -17.7 -3.85698 | gap 1, opp_overlap 1347985, overlap 1347980 1347985 GTCAAGATTCATTTC G-CAAAACCCCTATCTGC GCAT GCAGGTAGGGGTTTTGTC TTTGTGGGCAAAAAA TERM 1188 1347980 - 1348015 + H 100 -21.4 -3.51934 | opp_overlap 1347985, overlap 1347979 1347985 TCAAGATTCATTTCG CAAAACCCCTATCTGC GCAT GCAGGTAGGGGTTTTG TCTTTGTGGGCAAAA TERM 1189 1348010 - 1347985 - H 95 -13.3 -4.09864 | opp_overlap 1347985 1347980 1347979 ATTCATTTCGCAAAA CCCCTATCTGC GCAT GCAGGTAGGGG TTTTGTCTTTGTGGG TERM 1190 1347985 - 1348010 + H 100 -15.5 -4.84918 | opp_overlap 1347985, overlap 1347980 1347979 ATTCATTTCGCAAAA CCCCTATCTGC GCAT GCAGGTAGGGG TTTTGTCTTTGTGGG TERM 1191 1348714 - 1348681 - g 73 -6.7 -4.25104 | gap 1 TCCCGGTGAGGAAAA CCTCGACCTGCTC-GA ATC CCTGCGCAAGTCGAAG ATCAAGCTGGTACTG TERM 1192 1349067 - 1349047 - g 83 -6.7 -4.89477 | overlap 1349048 GGCCGAAGAAGAAAA GCCGGGTGC GGT GCACCTGGA GCTGCCGGAAGACAT Pput_1191 1348598 - 1350241 + | acetolactate synthase Pput_1192 1350679 - 1351575 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_1193 1351586 - 1352740 + | hypothetical protein Pput_1194 1352737 - 1353726 + | asparaginase/glutaminase TERM 1193 1353760 - 1353731 - f 85 -16.4 -2.71731 | opp_overlap 1353721 1353717 TGCAGCCCTGAACCA TCTGCCCGCGCG GTCGTT CGCGCGGGCAGC CCTTCCGGCGTTGCT TERM 1194 1353859 - 1353845 - g 72 -2.1 -4.67552 | overlap 1353846 CTCAGCAAAAAAGAA CTCGA CCGCC TCGAA GACCTGCTGATCACC Pput_1195 1353818 - 1354369 + | yecA family protein TERM 1195 1354453 - 1354427 - f 74 -10.2 -3.54459 | opp_overlap 1354427 1354433 GCAAGTGTTTGGAAA CCATTATTCCGC CCT GCGAAATTATGG TTTCCCCTGCGCACT Pput_1196 1354544 - 1355173 + | glutathione S-transferase domain-containing protein Pput_1197 1355201 - 1357237 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 1196 1357699 - 1357720 + G 82 -2.9 -5.24129 | overlap 1357701 TTACCTGCAGCAGTA CCCGGAAGT CGAC GTTTCCGCG TTTTTTCTCGACCGC Pput_1198 1357346 - 1358242 + | LysR family transcriptional regulator Pput_1199 1359185 - 1358316 - | aldose 1-epimerase TERM 1197 1358465 - 1358446 - G 100 -4.2 -5.42265 | overlap 1358447 1358448 TCAAAGCAGAAAAAA CCTTGCCC CTGC GGGCAATA CAGCAAGAAGTGTTC TERM 1198 1359264 - 1359215 - R 75 -13.5 -2.58252 | gap 1, overlap 1359214 AAATGAACGATCAAT TGGCCCGACGGTAGGTGAGCAGCA CGA TGCCGCACACC-ACCACCGCGCCG CCGAGTAATTGCAGG Pput_1200 1360133 - 1359210 - | hypothetical protein TERM 1199 1360154 - 1360184 + r 75 -13.8 -2.70932 | opp_overlap 1360155 GGATCCATTTGCAAG AGCCCAGGGGCCGC CAA GCGGCCCCCGGTCA TAATTACAGCACCAC TERM 1200 1360183 - 1360155 - R 100 -19.5 -3.04461 | opp_overlap 1360154 GATCCATTTGCAAGA GCCCAGGGGCCGC CAA GCGGCCCCCGGTC ATAATTACAGCACCA Pput_1201 1361468 - 1360188 - | TRAP dicarboxylate transporter, DctM subunit Pput_1202 1361996 - 1361469 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1201 1362039 - 1362010 - R 95 -14.9 -3.80014 | opp_overlap 1362008 1362005, overlap 1362011 ATAGGCATCACCAAA GCGGCAGGGCGGC GGCG GCCGCACTGCCGA GGTCGTCTTGGAAGG TERM 1202 1362038 - 1362011 - R 88 -18.4 -2.87527 | opp_overlap 1362008 1362005, overlap 1362010 TAGGCATCACCAAAG CGGCAGGGCGGC GGCG GCCGCACTGCCG AGGTCGTCTTGGAAG Pput_1203 1363034 - 1362063 - | TRAP dicarboxylate transporter, DctP subunit TERM 1203 1362558 - 1362570 + g 72 -2.6 -4.81551 | TTTGAGGTCTTCCAG GCTG CGCAC CGGC TTTTTGGTGTAGATG TERM 1204 1362873 - 1362888 + g 76 -6.1 -4.62302 | overlap 1362866 GGTAATGTCGCCATT GCTGG CCTGTT CCAGC TTTTTACCCATGTTC Pput_1204 1363980 - 1363099 - | SMP-30/gluconolaconase/LRE domain-containing protein Pput_1205 1364809 - 1364003 - | NAD-dependent epimerase/dehydratase TERM 1205 1364896 - 1364913 + r 73 -8.3 -4.09685 | TTGTCAATGAGGCTT GGGCGGC TTTT GCCGGCC TTTTCGCGGGTAAGA Pput_1206 1366605 - 1365367 - | outer membrane porin Pput_1207 1367364 - 1367603 + | bifunctional antitoxin/transcriptional repressor RelB Pput_1208 1367634 - 1367879 + | plasmid stabilization system protein TERM 1206 1368276 - 1368293 + T 78 -12.7 -3.37796 | opp_overlap 1368276 AAAATCATAAAAAAA GGCTGCC AATC GGCAGCC TTCTCGATGCTCAGC TERM 1207 1368293 - 1368276 - T 100 -12.7 -5.77632 | opp_overlap 1368276 AAAATCATAAAAAAA GGCTGCC AATC GGCAGCC TTCTCGATGCTCAGC Pput_1209 1369564 - 1368317 - | ribonucleotide-diphosphate reductase subunit beta TERM 1208 1368524 - 1368553 + g 76 -13.7 -3.12668 | gap 1 TGCGTTCATGCCCAG TACGCCGCGTGGCA TGG TGTCACG-GGCGTA TTCGATCTCCAGCTG TERM 1209 1370335 - 1370382 + r 70 -11.2 -2.95007 | opp_overlap 1370347, overlap 1370346 1370347 TTTTCGGGTGGTATG GGTGAGGAAAAACCGGGAGTGC TAAT GCTCTCCCGGCTTTCCTTGGCC TACTTCTCTTGGATC TERM 1210 1370346 - 1370371 + r 79 -10.3 -3.92178 | opp_overlap 1370347, overlap 1370335 1370347 TATGGGTGAGGAAAA ACCGGGAGTGC TAAT GCTCTCCCGGC TTTCCTTGGCCTACT TERM 1211 1370347 - 1370370 + r 77 -13.8 -2.94825 | opp_overlap 1370347, overlap 1370346 1370335 ATGGGTGAGGAAAAA CCGGGAGTGC TAAT GCTCTCCCGG CTTTCCTTGGCCTAC TERM 1212 1370370 - 1370347 - R 100 -13.8 -4.7254 | opp_overlap 1370347 1370346 1370335 ATGGGTGAGGAAAAA CCGGGAGTGC TAAT GCTCTCCCGG CTTTCCTTGGCCTAC TERM 1213 1370682 - 1370657 - R 77 -10.4 -3.70902 | opp_overlap 1370657 CGTGGGAGATTCAAA CCCGATGCAG TTGGCG CTGCGTCGGG TTTTTTATTGCCTGA TERM 1214 1370657 - 1370682 + r 100 -13.3 -5.4833 | opp_overlap 1370657 CGTGGGAGATTCAAA CCCGATGCAGT TGGC GCTGCGTCGGG TTTTTTATTGCCTGA TERM 1215 1370755 - 1370724 - R 73 -13.1 -2.6175 | opp_overlap 1370723 1370724 1370738, overlap 1370723 1370734 1370738 TACATGTGAACCAAG GCAGGAGAAAGCA AGCTAA TGCTTCCCCCTGC ATTTGCTGCCTTACT Pput_1210 1373645 - 1370766 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1216 1373762 - 1373722 - H 83 -14.1 -3.29144 | gap 2 CCACTTGCTCGATAA CCTCGC-GG-GGATGCGCA ATGCA TGCGCATCCGCCCGCGCGG GCGTACCGACTTCGG Pput_1211 1374393 - 1375091 + | two component transcriptional regulator TERM 1217 1376052 - 1376070 + G 72 -8 -4.13945 | overlap 1376048 CCCACGAGCTTCGCA CGCCGGTG GCG CGCCTGCG TTTTGGCCTGGAGAT Pput_1212 1375088 - 1376695 + | integral membrane sensor signal transduction histidine kinase Pput_1213 1377400 - 1376699 - | 4'-phosphopantetheinyl transferase TERM 1218 1377634 - 1377645 + r 74 -3 -4.86731 | opp_overlap 1377634 AGTTGCTCCCACAAC GATT GCAC AATC TTTTATTTGAACACC Pput_1214 1378439 - 1377648 - | dienelactone hydrolase Pput_1215 1378569 - 1379174 + | outer membrane protein H1 TERM 1219 1379267 - 1379287 + F 72 -9.7 -3.55071 | opp_overlap 1379242 1379241, overlap 1379280 GTGCAGTACCTTTGG CTTGTGCAG GTG CTGCACACG TTTCAGAGACTGTGC Pput_1216 1379369 - 1380046 + | two component transcriptional regulator Pput_1217 1380043 - 1381389 + | integral membrane sensor signal transduction histidine kinase Pput_1218 1381739 - 1383061 + | C4-dicarboxylate transporter DctA TERM 1220 1383075 - 1383105 + F 87 -17 -2.87931 | opp_overlap 1383076 1383082, overlap 1383082 GATAGCGGGTTGAAA TGAGAAAGGCGACC CAA GGTCGCCTTTTTCG TGTCTGCGCGGTCCC TERM 1221 1383104 - 1383076 - f 82 -16.1 -2.72263 | opp_overlap 1383075 1383082, overlap 1383082 ATAGCGGGTTGAAAT GAGAAAGGCGACC CAA GGTCGCCTTTTTC GTGTCTGCGCGGTCC TERM 1222 1383082 - 1383098 + F 100 -13.7 -4.84527 | opp_overlap 1383076 1383082, overlap 1383075 GGTTGAAATGAGAAA GGCGACC CAA GGTCGCC TTTTTCGTGTCTGCG TERM 1223 1383098 - 1383082 - f 95 -13.7 -4.13654 | opp_overlap 1383082 1383075, overlap 1383076 GGTTGAAATGAGAAA GGCGACC CAA GGTCGCC TTTTTCGTGTCTGCG Pput_1219 1383244 - 1383402 + | hypothetical protein TERM 1224 1383416 - 1383446 + T 87 -17 -2.87931 | opp_overlap 1383417 1383423, overlap 1383423 GATAGCGGGTTGAAA TGAGAAAGGCGACC CAA GGTCGCCTTTTTCG TGTCTGCGCGCTCCC TERM 1225 1383445 - 1383417 - T 82 -16.1 -2.72263 | opp_overlap 1383416 1383423, overlap 1383423 ATAGCGGGTTGAAAT GAGAAAGGCGACC CAA GGTCGCCTTTTTC GTGTCTGCGCGCTCC TERM 1226 1383439 - 1383423 - T 95 -13.7 -4.13654 | opp_overlap 1383416 1383423, overlap 1383417 GGTTGAAATGAGAAA GGCGACC CAA GGTCGCC TTTTTCGTGTCTGCG TERM 1227 1383423 - 1383439 + T 100 -13.7 -4.84527 | opp_overlap 1383423 1383417, overlap 1383416 GGTTGAAATGAGAAA GGCGACC CAA GGTCGCC TTTTTCGTGTCTGCG Pput_1220 1384176 - 1383484 - | hypothetical protein TERM 1228 1383951 - 1383970 + g 78 -7 -4.63218 | overlap 1383944 CGCCCAGACGCGGAG GCCGCACT TTCA GGCGCGGC TTTTCTTCCAGGGCC Pput_1221 1384644 - 1384183 - | hypothetical protein TERM 1229 1384666 - 1384687 + r 70 -10.8 -3.23853 | overlap 1384664 1384667 AGAATCCTGTTCAGG TGCCGCGC GTTCCG GCGCGGCG TATTGCTTAGAAACG TERM 1230 1384667 - 1384686 + r 70 -12.1 -2.54098 | overlap 1384666 1384664 GAATCCTGTTCAGGT GCCGCGC GTTCCG GCGCGGC GTATTGCTTAGAAAC Pput_1222 1385437 - 1384694 - | RNA-binding S4 domain-containing protein TERM 1231 1384920 - 1384953 + g 83 -14.5 -3.53343 | TCATTGCGCATGGCC CCACGCGCCAGGCGT TCCA GCGCCTGGGGGGTGG TTTCGCCGCGCACTT TERM 1232 1385093 - 1385044 - G 82 -14.3 -3.34517 | gap 2, overlap 1385042 AGTCCTGGGTAAACA CCTGCAGGCC-GC-TGGCGCCAC GCTCCA GCGGTGCCACGCAGGCCTGCCGG GCAAAATGCCCGTGC Pput_1223 1385979 - 1385524 - | GCN5-related N-acetyltransferase TERM 1233 1386103 - 1386083 - H 79 -12.6 -3.39895 | opp_overlap 1386077 CGGTCTATTAATTAA GCGTGGGA AAAAA TCCCACGC AAATATAAGTTCAAT Pput_1224 1386274 - 1386828 + | hypothetical protein Pput_1225 1387026 - 1387871 + | hypothetical protein TERM 1234 1388080 - 1388053 - g 74 -6.2 -4.4078 | gap 1, overlap 1388055 TGTGCGCAATGAAAA TGGCGGCGTCGGT GGC ACCGGTGCC-CCA GTCCAGCAACGCCCG Pput_1226 1387868 - 1389586 + | hypothetical protein Pput_1227 1389641 - 1390390 + | hypothetical protein TERM 1235 1390442 - 1390398 - T 100 -20.8 -5.24129 | gap 1, opp_overlap 1390398 1390433 1390434 CGTTCTGACAAAAAA GCCCCTGCGCCGGTCATTCCC TATG GAGAACG-CCGGGGCAGGGGC TTTGCAGGCTTCAGC TERM 1236 1390398 - 1390442 + T 100 -17.2 -3.57561 | opp_overlap 1390398, overlap 1390433 1390434 CGTTCTGACAAAAAA GCCCCTGCGCCGGTCATTC-CC TAT GGAGAACG-CCGGGGCAGGGGC TTTGCAGGCTTCAGC Pput_1228 1391793 - 1390462 - | MiaB-like tRNA modifying enzyme YliG TERM 1237 1392394 - 1392406 + G 73 -6.9 -4.36914 | GATCTGTGGCTTGAT CGGCG CTT CGCTG TTTTATGGCGACAGC Pput_1229 1392029 - 1393939 + | K+ potassium transporter TERM 1238 1393956 - 1393984 + T 85 -14.5 -3.45768 | opp_overlap 1393956 1393953, overlap 1393958 TGGGTTTATACAGCA GGGTCGGGGCCGC AGA GCGGCCCTGACTG TTGTCAGTTCTGCTC TERM 1239 1393958 - 1393982 + T 100 -19.3 -3.29558 | opp_overlap 1393956 1393953, overlap 1393956 GGTTTATACAGCAGG GTCGGGGCCGC AGA GCGGCCCTGAC TGTTGTCAGTTCTGC Pput_1230 1395280 - 1393988 - | virulence factor family protein TERM 1240 1394928 - 1394944 + g 73 -2.9 -4.74801 | overlap 1394932 GCACCGGGGCCGATG CCGGC GACCAAG GTCGG TTTTTCCTGCAGTTG Pput_1231 1397922 - 1395280 - | hypothetical protein TERM 1241 1398174 - 1398133 - H 83 -11.1 -3.92869 | gap 2, opp_overlap 1398137 1398141, overlap 1398137 1398141 TCAGGGAGGTATAAA GCAACAAACCCCGCGCTGC TTTTAC ACAG-GCGGGGTTTGTT-C TGACGAATATGGTTG TERM 1242 1398171 - 1398137 - H 81 -13 -3.61988 | gap 1, opp_overlap 1398137 1398141, overlap 1398133 1398141 GGAGGTATAAAGCAA CAAACCCCGCGCTGC TTTTAC ACAG-GCGGGGTTTG TTCTGACGAATATGG TERM 1243 1398137 - 1398171 + H 77 -12.3 -3.30771 | gap 1, opp_overlap 1398137 1398133 1398141, overlap 1398141 GGAGGTATAAAGCAA CAAACCCCGCGCTG CTTTTACA CAG-GCGGGGTTTG TTCTGACGAATATGG TERM 1244 1398141 - 1398167 + H 74 -7.3 -4.30987 | gap 1, opp_overlap 1398137 1398133 1398141, overlap 1398137 GTATAAAGCAACAAA CCCCGCGCTG CTTTTACA CAG-GCGGGG TTTGTTCTGACGAAT TERM 1245 1398167 - 1398141 - H 79 -8 -4.42976 | gap 1, opp_overlap 1398141 1398137, overlap 1398137 1398133 GTATAAAGCAACAAA CCCCGCGCTGC TTTTAC ACAG-GCGGGG TTTGTTCTGACGAAT TERM 1246 1398356 - 1398387 + H 81 -14.6 -3.16267 | opp_overlap 1398361, overlap 1398361 TATCAGCGGGCAAAG AAAAAGGCCACTGT GTTA ACAGTGGCCTTTTC TTGAATCTGGTTGCG TERM 1247 1398382 - 1398361 - H 100 -14.5 -5.27335 | opp_overlap 1398361 1398356 GCGGGCAAAGAAAAA GGCCACTGT GTTA ACAGTGGCC TTTTCTTGAATCTGG TERM 1248 1398361 - 1398382 + H 100 -14.5 -4.70169 | opp_overlap 1398361, overlap 1398356 GCGGGCAAAGAAAAA GGCCACTGT GTTA ACAGTGGCC TTTTCTTGAATCTGG TERM 1249 1398535 - 1398550 + H 75 -6.2 -4.56597 | overlap 1398519 1398526 CTTTGATTTTTCGAG GCTTTT TCGG AAAAGC TTTTTAACGGGCAAA TERM 1250 1398600 - 1398566 - H 81 -13.1 -3.60792 | gap 1, opp_overlap 1398572, overlap 1398572 TTTTTAACGGGCAAA GA-AAAAGGCCACTGC GTTA ACAGTGGCCTTTTCTC GAATCTGGTTGCGGG TERM 1251 1398572 - 1398593 + H 91 -11.6 -4.41548 | opp_overlap 1398566 1398572 ACGGGCAAAGAAAAA GGCCACTG CGTTAA CAGTGGCC TTTTCTCGAATCTGG TERM 1252 1398593 - 1398572 - H 100 -12.3 -5.27938 | opp_overlap 1398572, overlap 1398566 ACGGGCAAAGAAAAA GGCCACTGC GTTA ACAGTGGCC TTTTCTCGAATCTGG Pput_1232 1398898 - 1399962 + | DNA polymerase IV TERM 1253 1399965 - 1399983 + T 100 -16 -3.71284 | opp_overlap 1399965 CCCGCCTAAATGAAA GGGGCTGC AAT GCAGCCCC TTCTATTAATGCACG TERM 1254 1399983 - 1399965 - T 100 -16 -4.05788 | opp_overlap 1399965 CCCGCCTAAATGAAA GGGGCTGC AAT GCAGCCCC TTCTATTAATGCACG Pput_1233 1400942 - 1399989 - | hypothetical protein Pput_1234 1402678 - 1400963 - | prolyl-tRNA synthetase TERM 1255 1402621 - 1402638 + g 78 -6.9 -4.57482 | GCTGATGGCTGATGA CCACTGC GTCG GCAGGGG TTTCTTTCTGGGTGG TERM 1256 1402813 - 1402782 - R 95 -18.9 -3.05935 | opp_overlap 1402788, overlap 1402788 ACACTTGTCAGCCAA GAAAAAGCCCGGC GTGATT GCCGGGCTTTTTC AGGTGCGGGGCACTG TERM 1257 1402807 - 1402788 - R 100 -12.1 -5.10461 | opp_overlap 1402788, overlap 1402782 GTCAGCCAAGAAAAA GCCCGGC GTGATT GCCGGGC TTTTTCAGGTGCGGG TERM 1258 1402788 - 1402807 + r 95 -12.8 -4.62069 | opp_overlap 1402788 1402782 GTCAGCCAAGAAAAA GCCCGGCG TGAT TGCCGGGC TTTTTCAGGTGCGGG Pput_1235 1404104 - 1402839 - | outer membrane porin TERM 1259 1403211 - 1403228 + g 74 -9.1 -3.96148 | opp_overlap 1403211 GATACCATAACCATA GTCGCCG TCGC CGGTGAC TTTCTGGTAGGCCAG Pput_1236 1404796 - 1405215 + | histidine triad (HIT) protein Pput_1237 1405217 - 1405423 + | hypothetical protein Pput_1238 1406138 - 1405545 - | cold-shock DNA-binding domain-containing protein TERM 1260 1405707 - 1405679 - G 85 -10.3 -4.29432 | GAAAGTGCACGAAAA TGTCATCACCCGA GTC TCGGGAGATGAAA CCAAAGCCTTTCGAT TERM 1261 1406908 - 1406855 - g 76 -6.7 -4.4648 | opp_overlap 1406869 AGGTGCACGAGAAAA CCGCCTGGATGCTGCGGGTACT-GC TCGACG GCGAGTAACCGTTGC-TCAAGGCGG AAAGCTTGCGCAACC Pput_1239 1406419 - 1406892 + | Ferritin, Dps family protein TERM 1262 1407132 - 1407089 - f 95 -16.8 -3.55071 | gap 1, opp_overlap 1407073 1407126 CGATAGGGCCGCAAA GCGGCCCCAGCAATCTATGCA TGA TGCCGAGATC-CTGGGGCCGC TGCGCGGCCCTTTCG TERM 1263 1407126 - 1407142 + F 88 -15.1 -3.53012 | opp_overlap 1407089 GATGCCGAGATCCTG GGGCCGC TGC GCGGCCC TTTCGCGACGCAAGG Pput_1240 1407279 - 1407608 + | hypothetical protein Pput_1241 1407703 - 1407924 + | FmdB family regulatory protein aspS 1408018 - 1409793 + | aspartyl-tRNA synthetase TERM 1264 1409804 - 1409825 + F 100 -15.9 -3.84451 | AGTAAGCAGTCCCCG GGCGCATCC ACAT GGATGCGCC TTTGCGTTTCGACGC TERM 1265 1409851 - 1409879 + F 100 -15.9 -4.05446 | overlap 1409853 GACGCAGGTATTTTC CCGTCCCGCCCCG TCA TGGGGCGGGGCTG TTTGTGATTCAAAGG TERM 1266 1409853 - 1409877 + F 100 -17.1 -3.6217 | overlap 1409851 CGCAGGTATTTTCCC GTCCCGCCCCG TCA TGGGGCGGGGC TGTTTGTGATTCAAA Pput_1243 1409908 - 1410654 + | hypothetical protein TERM 1267 1410723 - 1410780 + F 100 -28.1 -3.53012 | gap 1, opp_overlap 1410723 CCTTTCGCGGGTAAA CCCGCTCCTACAGGTATTACGCC-CATT TCA AATGTGGTGCAGTACCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 1268 1410780 - 1410723 - f 100 -25.9 -3.53012 | gap 1, opp_overlap 1410723 CCTTTCGCGGGTAAA CCCGCTCCTACAGGTATTACGCC-CATT TCA AATGTGGTGCAGTACCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 1269 1410931 - 1410981 + G 93 -9.5 -4.79223 | overlap 1410934 1410935 GCGAGTACGTGGCGT CGGGCTGCATCCGCACCGGCAGC GGTGA GCTGCACGAGCGGCTGCAGATTG TTTTTCGTGGTGTCA TERM 1270 1410934 - 1410978 + G 95 -9.8 -4.49314 | overlap 1410931 1410935 AGTACGTGGCGTCGG GCTGCATCCGCACCGGCAGC GGTGA GCTGCACGAGCGGCTGCAGA TTGTTTTTCGTGGTG TERM 1271 1410935 - 1410977 + G 74 -13.3 -3.28504 | overlap 1410934 1410931 GTACGTGGCGTCGGG CTGCATCCGCACCGGCAGC GGTGA GCTGCACGAGCGGCTGCAG ATTGTTTTTCGTGGT ruvC 1410840 - 1411364 + | Holliday junction resolvase ruvA 1411474 - 1412091 + | Holliday junction DNA helicase motor protein ruvB 1412088 - 1413134 + | Holliday junction DNA helicase B TERM 1272 1413241 - 1413215 - f 88 -3.1 -5.5604 | gap 1, overlap 1413218 TTAATGAAGAAAAAA CAG-TTGCCA CAGCGGAT TGGCAAGCTG AGGAGTAAGCACTAG Pput_1247 1413260 - 1413712 + | Pol-Pal system-associated acyl-CoA thioesterase TERM 1273 1413959 - 1413986 + G 81 -13.4 -3.56099 | opp_overlap 1413946 1413949, overlap 1413952 ACCCAGACCCGGACT CCGGCGTGGAGC AGGT GTTCCGTGCCGG TTTCAAGGAGTTCTC Pput_1248 1413715 - 1414410 + | Tol-Pal system, TolQ Pput_1249 1414425 - 1414877 + | biopolymer transport, TolR TERM 1274 1415193 - 1415183 - g 74 -2.4 -4.87892 | GCGGAACAAAAGAAA GCTG ACG CCGC TCAAAAGGCCGAAGA TERM 1275 1415575 - 1415536 - g 74 -9.2 -3.96068 | overlap 1415560 GGACGCGAAGAAGAA GGCAGCTGAAGAGGCC AAGAAAAA GGCCGCTGCAGATGCC CAGAAGAAGAAGGCA TERM 1276 1415602 - 1415560 - g 83 -4.7 -5.09204 | overlap 1415536 1415597 AGAGGCCAAGAAAAA GGCCGCTGCAGATGCCC AGAAGAAGA AGGCACAGGAAGCGGCC CGCAAGGCGGCAGAA TERM 1277 1415641 - 1415627 - g 74 -5.6 -4.49353 | opp_overlap 1415627, overlap 1415629 GCAGAAGACAAGAAA GCCCAG GCA CTGGCC GAGCTGTTGTCCGAT Pput_1250 1414877 - 1415995 + | Tol-Pal system, TolA TERM 1278 1416398 - 1416370 - g 73 -13.1 -3.22298 | GCCACCGAGCAGCAA GTGCTGACCGGCA GCG TGGCGGGCAGCAC CGACCAGCTGCGCGA tolB 1416022 - 1417293 + | translocation protein TolB Pput_1252 1417348 - 1417848 + | peptidoglycan-associated lipoprotein TERM 1279 1417962 - 1417941 - g 79 -13.7 -3.484 | opp_overlap 1417940 1417939 TGTAGTAGATGACAA CGCAGGCAG CTAT CCGCCTGCG GGTTATGGCACGAGC TERM 1280 1417974 - 1418031 + G 76 -13.4 -3.15544 | overlap 1417976 1418028 TGCGGGTTATGGCAC GAGC-GGCGCCTATGCCGGGTCAGGGGC TTCG GCCCCTGCCTCTGCACAGG-GCCAGCTG TTCATGCAGCTGCAA TERM 1281 1417976 - 1418029 + G 86 -16 -3.14051 | overlap 1417974 1418028 CGGGTTATGGCACGA GC-GGCGCCTATGCCGGGTCAGGGGC TTCG GCCCCTGCCTCTGCACAGG-GCCAGC TGTTCATGCAGCTGC TERM 1282 1418028 - 1418062 + G 71 -11.4 -3.53012 | overlap 1417976 1417974 CTCTGCACAGGGCCA GCTGTTCATGCAGCTG CAA CAGATGCAGGATCAGC TTTCCCGCCAGCAAG Pput_1253 1417855 - 1418661 + | Tol-Pal system, YbgF TERM 1283 1418690 - 1418706 + F 100 -10.8 -5.27477 | opp_overlap 1418690 ACCGCTCGAAAGAAA CCCGCG CCAGT CGCGGG TTTTTTCGTTAGAAT TERM 1284 1418706 - 1418690 - f 88 -10.8 -4.41616 | opp_overlap 1418690 ACCGCTCGAAAGAAA CCCGCG CCAGT CGCGGG TTTTTTCGTTAGAAT TERM 1285 1419142 - 1419128 - g 71 -11.4 -3.53091 | opp_overlap 1419127 AGGTGTCGCTGGAAA CCAGCG GCG CGCTGG ATATTGCCGGCACCG Pput_1254 1418830 - 1419477 + | radical SAM domain-containing protein Pput_1255 1419495 - 1420169 + | exsB protein TERM 1286 1420315 - 1420354 + T 90 -15 -3.60296 | opp_overlap 1420308, overlap 1420322 CCACCATACGCATTA CGTGAGAGCCCGCTACCA GAAA TGGTCGCGGGCTTTTTCG TTTGCGCTACGGGTG TERM 1287 1420322 - 1420347 + T 100 -14.7 -4.99134 | opp_overlap 1420308, overlap 1420315 ACGCATTACGTGAGA GCCCGCTACCA GAAA TGGTCGCGGGC TTTTTCGTTTGCGCT TERM 1288 1420395 - 1420381 - T 100 -12.8 -5.00616 | GGTGTTCGGAAAAAA GGGCGC AGA GCGCCC ACCAATTACTCGGCC Pput_1256 1421360 - 1420401 - | cation efflux protein Pput_1257 1423569 - 1421503 - | methyl-accepting chemotaxis sensory transducer TERM 1289 1423624 - 1423593 - R 86 -11.5 -4.15044 | opp_overlap 1423598, overlap 1423594 1423598 TCCTTTTCGAACAAA TGCAACGCCCGCG ATCAGG CGCGGGCGTTGTT GGCAGCGTGGGTCAT TERM 1290 1423623 - 1423594 - R 83 -15 -3.08812 | opp_overlap 1423598, overlap 1423593 1423598 CCTTTTCGAACAAAT GCAACGCCCGCG ATCAGG CGCGGGCGTTGT TGGCAGCGTGGGTCA TERM 1291 1423619 - 1423598 - R 83 -14.4 -3.37761 | opp_overlap 1423598, overlap 1423594 1423593 TTCGAACAAATGCAA CGCCCGCG ATCAGG CGCGGGCG TTGTTGGCAGCGTGG TERM 1292 1423598 - 1423619 + r 86 -14.4 -3.62046 | opp_overlap 1423598 1423594 1423593 TTCGAACAAATGCAA CGCCCGCG ATCAGG CGCGGGCG TTGTTGGCAGCGTGG Pput_1258 1424988 - 1423636 - | amino acid permease-associated region Pput_1259 1425436 - 1426944 + | hypothetical protein TERM 1293 1426979 - 1427014 + F 75 -11.2 -3.53012 | gap 1, overlap 1426984 CTCTTCGCGGGTGAA CCCGCTCCTAC-CAG GATTTCA CAGTGTAGGAGCGGG TTTGCCCGCGAAGAG Pput_1260 1427219 - 1428277 + | quinolinate synthetase Pput_1261 1429502 - 1428552 - | transposase, IS111A/IS1328/IS1533 Pput_1262 1431196 - 1429760 - | peptidase M48, Ste24p TERM 1294 1431526 - 1431515 - g 72 -7.2 -4.15044 | CCCTGCTGCAAGAAA CGGC CGAG GCCG GTACCTATACTTACT Pput_1263 1431319 - 1431558 + | SirA family protein Pput_1264 1431579 - 1432649 + | hypothetical protein Pput_1265 1433240 - 1432767 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pput_1266 1433812 - 1433252 - | glycine cleavage system regulatory protein-like protein TERM 1295 1433701 - 1433711 + g 73 -8.2 -4.07568 | GGCGCGAGGTGACCA CCGC GCA GCGG TTTTCGAAGGCAGCG TERM 1296 1434803 - 1434786 - g 77 -4.1 -4.93547 | GCAATCAACGAAAAA CTCATGC CGCT GCACAAG GACCTGTTCTGCGAG TERM 1297 1434947 - 1434921 - g 73 -2.9 -4.72272 | gap 1, opp_overlap 1434933 1434938, overlap 1434922 1434923 GGCTGCCACGAAAAA GTCCGTACTGCC TTGC GCCAGTCCGG-C GTACTGGTTTAAGAG Pput_1267 1434072 - 1434959 + | dihydrodipicolinate synthase TERM 1298 1435465 - 1435422 - g 80 -14.6 -3.14344 | gap 1 CAGCGTTTCGACGAA CTGTCGGCATCGCTTGGCCAG CGT CTGGCC-AGCACTGCCAGCAG CGGCGACAGCGAGGT Pput_1268 1434975 - 1436096 + | hypothetical protein TERM 1299 1436198 - 1436226 + G 81 -12.3 -3.87815 | opp_overlap 1436200, overlap 1436199 CTTTTCCCTGCGTGA AACCGAGCGGCGC CTG GCGCTGCTCGGGG TTTCTGCCGCTCAGC TERM 1300 1436199 - 1436225 + G 79 -15.8 -2.92475 | opp_overlap 1436200, overlap 1436198 TTTTCCCTGCGTGAA ACCGAGCGGCGC CTG GCGCTGCTCGGG GTTTCTGCCGCTCAG TERM 1301 1436224 - 1436200 - g 93 -17.1 -3.53012 | opp_overlap 1436199 1436198 TTTCCCTGCGTGAAA CCGAGCGGCGC CTG GCGCTGCTCGG GGTTTCTGCCGCTCA Pput_1269 1436097 - 1436855 + | beta-lactamase domain-containing protein Pput_1270 1436886 - 1437596 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1302 1437822 - 1437783 - T 72 -10.6 -3.48276 | opp_overlap 1437789, overlap 1437789 CTCTCCGCCATACAA GATCAAGCCCCTGGAAGC GAAA GCTACCGGGGGCTTTTTC GTTATGGAAGGCAAA TERM 1303 1437816 - 1437789 - T 79 -12.6 -3.44443 | opp_overlap 1437789, overlap 1437783 GCCATACAAGATCAA GCCCCTGGAAGC GAAA GCTACCGGGGGC TTTTTCGTTATGGAA TERM 1304 1437789 - 1437816 + T 100 -14.8 -4.93365 | opp_overlap 1437789 1437783 GCCATACAAGATCAA GCCCCTGGAAGC GAAA GCTACCGGGGGC TTTTTCGTTATGGAA Pput_1271 1438226 - 1437876 - | putative transcriptional regulator Pput_1272 1439152 - 1438880 - | hypothetical protein Pput_1273 1439490 - 1439227 - | hypothetical protein Pput_1274 1440131 - 1440991 + | SH3 type 3 domain-containing protein TERM 1305 1441021 - 1441008 - g 80 -5.9 -4.74801 | opp_overlap 1441008 1441018 1441019 1441020 GAACTCCATGAAAAA GCACG CGCT CGCGC TGGCTGTGATCGGCG TERM 1306 1441729 - 1441707 - g 78 -9.8 -4.07568 | GGTGGTCCTGGAAAA CCGCAACCTG ATG CAGGTAACGG ACGGCACCGGCTGCA Pput_1275 1441000 - 1442928 + | hypothetical protein TERM 1307 1443912 - 1443890 - g 85 -15 -3.54129 | TACAGTGGCTTCAAA TCGCTGAAAG AGG CTTTCAGCGA TTACCAGCAGCAAGT Pput_1276 1442939 - 1444147 + | hypothetical protein TERM 1308 1444199 - 1444171 - T 95 -16.7 -3.67597 | opp_overlap 1444171 TGGCTGAGTGAACAA GCCCCCGGGAACC CTG AGTTGCCGGGGGC TTTTTTTGCTGTCAG TERM 1309 1444171 - 1444199 + T 100 -16 -5.58454 | opp_overlap 1444171 TGGCTGAGTGAACAA GCCCCCGGGAAC CCTGA GTTGCCGGGGGC TTTTTTTGCTGTCAG Pput_1277 1444860 - 1444243 - | lysine exporter protein LysE/YggA Pput_1278 1445051 - 1445242 + | hypothetical protein TERM 1310 1445287 - 1445312 + F 100 -16.9 -5.61881 | opp_overlap 1445285 CGGCGTGATCCAAGG CCCCCGGTCAT GCAC ATGGCCGGGGG TTTTTGTTTTTGACG TERM 1311 1445455 - 1445415 - f 74 -4.8 -4.69622 | gap 2, opp_overlap 1445445, overlap 1445419 ATACAATCGGAAAAA CGATTCAGCCTTGTCGGTCA ATT CGACC-A-AAGGCCGAGCCG TTTTCTAGTTCTCTG Pput_1279 1445570 - 1447207 + | malate:quinone oxidoreductase TERM 1312 1447230 - 1447251 + T 100 -13.7 -5.4505 | opp_overlap 1447230 TTGTTGTGAAAGAAA GCCACGGGG GAGA CCTCGTGGC TTTTTTGTTGCCAAG TERM 1313 1447251 - 1447230 - T 91 -11.5 -4.41348 | opp_overlap 1447230 TTGTTGTGAAAGAAA GCCACGGGG GAGA CCTCGTGGC TTTTTTGTTGCCAAG Pput_1280 1447675 - 1447340 - | ArsR family transcriptional regulator Pput_1281 1447725 - 1448816 + | NADH:flavin oxidoreductase/NADH oxidase Pput_1282 1450187 - 1448940 - | FAD dependent oxidoreductase TERM 1314 1449636 - 1449612 - G 73 -10.7 -3.61398 | opp_overlap 1449614 GGTGCGCGGGAAGAA CAGCCCGCC CAACAGT GACGGGCTG AGTTGCGGCGCCGCT Pput_1283 1451767 - 1450190 - | aldehyde dehydrogenase TERM 1315 1451876 - 1451843 - R 75 -13.1 -3.03124 | gap 1, opp_overlap 1451845 GTTCACCCGCGAACA CCGGCGAAGCCGGTGC CAT GCACCGGG-TCGCCTG ATTCGCGGGCACGCC TERM 1316 1451845 - 1451874 + r 78 -14.3 -2.70932 | gap 1, opp_overlap 1451843 TCACCCGCGAACACC GGCGAAGCCGGTGC CAT GCACCGGG-TCGCC TGATTCGCGGGCACG Pput_1284 1452866 - 1451919 - | dihydrodipicolinate synthetase TERM 1317 1452928 - 1452903 - R 71 -7.4 -4.07568 | overlap 1452904 TGGGTTTGGTCAAAA GGCCGGGGGC TCAGAT GCCCCAGGCG AACGGGTCCTGTTCG Pput_1285 1453839 - 1452913 - | proline racemase Pput_1286 1455476 - 1453863 - | amino acid permease-associated region TERM 1318 1455444 - 1455455 + g 84 -4.4 -5.22039 | GAAGGTGAGGTCCAG CAGT GATA ACTG TTTTTTGAATTTGCC Pput_1287 1455854 - 1456636 + | AraC family transcriptional regulator Pput_1288 1457511 - 1456624 - | LysR family transcriptional regulator Pput_1289 1457653 - 1458192 + | molybdenum cofactor biosynthesis protein B Pput_1290 1459176 - 1458277 - | hypothetical protein moaA 1460201 - 1459197 - | molybdenum cofactor biosynthesis protein A TERM 1319 1460103 - 1460082 - G 71 -8.7 -3.85698 | opp_overlap 1460074 CTGGCGCGGCAGAAA CTGCATGTC TTCG GCCATGCAG TACACGCAACGGAAG Pput_1292 1460424 - 1462754 + | oxidoreductase alpha (molybdopterin) subunit Pput_1293 1463358 - 1462864 - | AsnC family transcriptional regulator Pput_1294 1463418 - 1464599 + | cystathionine gamma-lyase TERM 1320 1464625 - 1464651 + T 75 -11.5 -3.53444 | CTCTTCGCGGGCTCG CCCGCGCCTGC AGGTG GTAGGAGCGGG TTTACCCGCGAATAC Pput_1295 1465048 - 1464812 - | hypothetical protein Pput_1296 1465301 - 1466938 + | hypothetical protein TERM 1321 1466968 - 1466983 + F 73 -11.8 -3.04248 | overlap 1466980 GGGCAAGCCCGCGAA CCCGGG CAAG CCCGGG TCTTACACCGTATTG Pput_1297 1467116 - 1468249 + | ribonuclease D Pput_1298 1468246 - 1468539 + | hypothetical protein TERM 1322 1468666 - 1468691 + G 70 -11.9 -3.15249 | gap 1 GTCAGGCACCGCAGT GTCCGGTGTGGC TGG GCCA-GCCGGAC TTGCTGGCCAGTCTG TERM 1323 1469369 - 1469396 + G 81 -12 -3.90922 | gap 1 CGGGCACAGCTCAGC GCCCACC-TCGCC GGC GGCGATGGTGCGC TTGTTTGCGGAGAAT Pput_1299 1468542 - 1469474 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_1300 1470180 - 1469587 - | nitroreductase TERM 1324 1470359 - 1470340 - g 73 -8.5 -4.10161 | overlap 1470341 GATGATCGCTGAAAA CGCGCCG TTCTGG CGGCGCA AGACCCTCGAACAAC Pput_1301 1470326 - 1470775 + | hypothetical protein Pput_1302 1470817 - 1472025 + | hypothetical protein TERM 1325 1472262 - 1472307 + T 100 -17.6 -5.29846 | gap 1 CGGAGCTCAGCACTC GGTCGCC-CTGTGTTGGCAGG TCTGT CCTGCCGCCGCAGTGGCGGCC TTTTTATTTGAACTT Pput_1304 1472781 - 1472311 - | tRNA/rRNA methyltransferase (SpoU) TERM 1326 1472754 - 1472769 + g 71 -5.4 -4.42062 | overlap 1472752 TGGGGTTGAACAGGC CGATGC AGCT GTATCG TTTGTTTGCCACGTA Pput_1305 1473224 - 1472853 - | hypothetical protein TERM 1327 1473722 - 1473775 + r 100 -24.7 -2.85351 | opp_overlap 1473740 1473742 ACTGGATTCCGCGCT GTGGACTGCACCTCAGAAGATGGAC AGAT GTCCAACATCTGGGGTGCAGCCCAC TGTCCTGTGGGAGCG TERM 1328 1473823 - 1473807 - R 88 -15.1 -3.53012 | opp_overlap 1473803 CCTTGTGTCGCGAAA GGGGCGC AAC GCGCCCC CCGCTCTCTCAAAGG Pput_1306 1475874 - 1473832 - | oligopeptidase B TERM 1329 1476395 - 1476380 - g 73 -8.2 -4.07568 | CTGGCCGCTGGAAAA GCGCGC GCAC GCACGC CGTGAGCAGGCCGAA Pput_1307 1476054 - 1476551 + | hypothetical protein TERM 1330 1476730 - 1476692 - g 70 -12.2 -3.14683 | opp_overlap 1476693 ATAGGCTTTTACGAA GGCCGCGGCCTGCGCCTG TTC CAGGACCCGGCCGCGAGC AGCGAGTCGGAAGTA Pput_1308 1476566 - 1477339 + | glutamine amidotransferase, class-II Pput_1309 1477349 - 1477870 + | hypothetical protein Pput_1310 1478917 - 1478006 - | LysR family transcriptional regulator TERM 1331 1479733 - 1479716 - g 72 -7.7 -4.15453 | gap 1, opp_overlap 1479716 1479717, overlap 1479717 CAAGGCAGTGGAAAA CGCCGAGG CAC CCTCG-CG CTTCTACGAAATCTT Pput_1311 1479048 - 1480334 + | major facilitator transporter Pput_1312 1480344 - 1481120 + | hypothetical protein Pput_1313 1481120 - 1481806 + | allophanate hydrolase subunit 1 Pput_1314 1481803 - 1482720 + | urea amidolyase related protein Pput_1315 1484016 - 1482838 - | hypothetical protein Pput_1316 1484875 - 1484030 - | ATPase TERM 1332 1484068 - 1484090 + g 86 -6.3 -5.00616 | TAAAGGCCAGGCGCT CGAGCAG TTGTACATC CTGCTCG TTTTTTACCAGCGCA TERM 1333 1484192 - 1484216 + g 86 -6.3 -5.06414 | CAGCAGCTTGAGCCA GTCGACCAGCT CGG AGGTGGACGGC TTTTTCTTCAGCCCC TERM 1334 1485057 - 1485020 - R 70 -9.9 -3.53444 | gap 1, opp_overlap 1485021, overlap 1485021 1485024 CCAGGCGGCTGCAAA CGCAGACCGGGTATTCAG TCC CTGAATGCCCCGTC-ACG CTGTCTCAGTCAGAC TERM 1335 1485054 - 1485024 - R 73 -12.6 -2.64155 | opp_overlap 1485021, overlap 1485020 1485021 GCGGCTGCAAACGCA GACCGGGTATTCAG TCC CTGAATGCCCCGTC ACGCTGTCTCAGTCA Pput_1317 1486136 - 1485063 - | hypothetical protein Pput_1318 1486269 - 1487243 + | cysteine synthase A Pput_1319 1487417 - 1488352 + | aspartyl/asparaginyl beta-hydroxylase TERM 1336 1488390 - 1488447 + G 71 -14.1 -2.57132 | gap 1, overlap 1488390 1488403 CTTTTGCGGGGCAAG CCCGCTGACACCGGTGCGCC-TGATCCT TCA AGGACGAGGGTGCGCTTGTGGCAGCGGG GTTGTGCCGCGAAGA Pput_1320 1488378 - 1488671 + | hypothetical protein TERM 1337 1488880 - 1488901 + G 79 -11.5 -3.90286 | GATCGTCTCCAAGCT CGGCCTGGC GCAT GCCAGCCCG TTTGCCTTTCTGCTG Pput_1321 1488788 - 1489669 + | hypothetical protein Pput_1322 1490131 - 1489673 - | hypothetical protein TERM 1338 1490086 - 1490111 + g 100 -11.9 -4.83615 | overlap 1490087 GTGGGTAGCCGTTCT CGTCCTGTTCC AGGC GGAACAGGACC TTTTTGTACGCGCTG TERM 1339 1490087 - 1490110 + g 85 -15.4 -3.49687 | overlap 1490086 TGGGTAGCCGTTCTC GTCCTGTTCC AGGC GGAACAGGAC CTTTTTGTACGCGCT Pput_1323 1491020 - 1490145 - | hypothetical protein TERM 1340 1492290 - 1492273 - g 76 -8.4 -4.18018 | TCTCGCCATCGAAAA CCGTGG ACCGCG CCACGG TGATCGACAAGTACC aceK 1491225 - 1492940 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein Pput_1325 1493820 - 1492960 - | hypothetical protein Pput_1326 1493951 - 1494787 + | RNA-binding S1 domain-containing protein Pput_1327 1495173 - 1494793 - | hypothetical protein Pput_1328 1495409 - 1495588 + | CsbD family protein TERM 1341 1495606 - 1495649 + F 88 -16.9 -3.14881 | gap 2, opp_overlap 1495630, overlap 1495600 1495607 TGAGGTGAGGCGGCC T-GTGCCGGTCTCTG-GCGGG TAAA CCCGCGTAGAGGCCGGCACTA TTCGTAAGCAAATTC TERM 1342 1495607 - 1495647 + F 100 -22 -3.13522 | gap 1, opp_overlap 1495630, overlap 1495600 1495606 GAGGTGAGGCGGCCT GTGCCGGTCTCTG-GCGGG TAAA CCCGCGTAGAGGCCGGCAC TATTCGTAAGCAAAT Pput_1329 1495749 - 1496705 + | putative ribonuclease BN Pput_1330 1496705 - 1497241 + | peptide deformylase Pput_1331 1497636 - 1497196 - | GCN5-related N-acetyltransferase Pput_1332 1497919 - 1498176 + | hypothetical protein TERM 1343 1498183 - 1498220 + F 95 -18.5 -3.15861 | CAGGGTTGACTGGCG GTGCCCGCCACAGGG GCTGAAAA CGCTGTGGCGGGCAC TTGCTAACCCTGATG Pput_1333 1498366 - 1498791 + | hypothetical protein Pput_1334 1498836 - 1499180 + | DGPFAETKE family protein Pput_1335 1499202 - 1499687 + | activator of Hsp90 ATPase 1 family protein TERM 1344 1499988 - 1500033 + G 77 -12.5 -3.65046 | opp_overlap 1499999 AGGCGCAGGACCCCA GTGAAGAAGAACTGCTGGCGG ATGA CCGCCTGCGGCTGATCTTCAC TTGTTGCCATCCGGC TERM 1345 1500022 - 1499999 - g 76 -9.4 -3.97307 | opp_overlap 1499988 CCCAGTGAAGAAGAA CTGCTGGCGG ATGA CCGCCTGCGG CTGATCTTCACTTGT Pput_1336 1499687 - 1500925 + | RNA polymerase ECF-subfamily sigma factor Pput_1337 1501514 - 1501044 - | dehydratase Pput_1338 1502493 - 1501549 - | alpha/beta hydrolase fold Pput_1339 1502712 - 1504400 + | acyl-CoA synthetase TERM 1346 1504416 - 1504447 + F 79 -13.1 -3.53444 | overlap 1504417 TACCGGGATGGCGTC TTCGCTCCTACAC CGCCCA GTGTAGGAGCGGG TTTACCCGCGAATGC TERM 1347 1504417 - 1504446 + F 78 -14.4 -2.71924 | overlap 1504416 ACCGGGATGGCGTCT TCGCTCCTACAC CGCCCA GTGTAGGAGCGG GTTTACCCGCGAATG Pput_1340 1504720 - 1506417 + | acyl-CoA synthetase TERM 1348 1506480 - 1506464 - T 88 -15.1 -3.53012 | opp_overlap 1506459 CCTGGTGTCGCGAAA GGGCCGC GAA GCGGCCC TGGGGTTTCGGCGGC TERM 1349 1506512 - 1506528 + T 88 -15.1 -3.53012 | opp_overlap 1506507 ATGCAACAATGGCTG GGGGCGC TTT GCGCCCC TTTCGCGACACAAGG Pput_1341 1508011 - 1506704 - | FAD dependent oxidoreductase TERM 1350 1507799 - 1507815 + g 70 -10.1 -3.55444 | GCGACCGCTGGCGCC CCAGCCG ATA CGGTTGG TTTCGACGATGGCGA TERM 1351 1508037 - 1508068 + r 74 -12.2 -3.09933 | overlap 1508039 TGTTTTGTAGGGGCT CAGGCCTGGTGCAG GTAC CAGCGCCAGTCCTG TTCGCTGACTTCAGC Pput_1342 1509415 - 1508036 - | glutamate--putrescine ligase TERM 1352 1509478 - 1509462 - R 84 -13.7 -3.65902 | opp_overlap 1509461 1509460 CCCAGTTGAGTCAAA CGGCCAG ACG CTGGCCG GGTTTGGTCACAATG Pput_1343 1509701 - 1509486 - | hypothetical protein TERM 1353 1509954 - 1509941 - H 85 -8.1 -4.77036 | GCCGATCATGAAAAA GCAGG CTCA CCTGC ATCACTAAAAAGCCC TERM 1354 1511189 - 1511177 - g 70 -10.5 -3.63895 | opp_overlap 1511186 1511187 GCCAACCAGCGTAAA GGCCG TTG CGGCC GGGTCGAGCCGGGCA TERM 1355 1511380 - 1511366 - g 70 -10 -3.59979 | opp_overlap 1511351 1511360 CCGCCGGATGGCAAA GCCATC AGC GATGGC TTCAACCTGTTGCAG TERM 1356 1511450 - 1511422 - g 74 -13.2 -3.33261 | gap 1 GGTTAACCGCGAGAA CCAGCTGAC-GCC AATT GGCCGCCAGCTGG CGCGCTTGCCGATCG TERM 1357 1512094 - 1512076 - g 82 -3 -5.1356 | CCTGATCAAGAAAAA CCATTTCG AGC CGCACTGG GAGAAGAAGCGCGGG Pput_1344 1509971 - 1513876 + | ATP-dependent helicase HrpA TERM 1358 1514199 - 1514218 + G 76 -10 -3.85698 | gap 1, opp_overlap 1514164 1514158 GTGAAGTCGAGGCGG CGCCGC-TC TCC GACGCGGCG TTTATCGAAAAGGCC Pput_1345 1514000 - 1515172 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1359 1515349 - 1515310 - T 100 -19.4 -4.72846 | opp_overlap 1515321, overlap 1515313 TCACACAGGCAAAAA GAAGCGGGAAACGCCG GATGGGGT CGGCGTTTCCCGCGTC AGGTGAAGCAGAGCA TERM 1360 1515346 - 1515313 - T 100 -19.7 -4.46215 | opp_overlap 1515321, overlap 1515310 CACAGGCAAAAAGAA GCGGGAAACGCCG GATGGGGT CGGCGTTTCCCGC GTCAGGTGAAGCAGA Pput_1346 1516618 - 1515374 - | hypothetical protein TERM 1361 1516377 - 1516390 + g 81 -3.7 -5.06414 | overlap 1516375 TTGATCTGGGTCTTG GCGGC CCAT GCCAC TTTTTGTTCAAAGGA TERM 1362 1516667 - 1516642 - H 91 -6 -5.47218 | opp_overlap 1516643 1516665, overlap 1516643 CCCTACTGAAAAAAA TGGGGGAGGC TCAAGC GCCTGCCCCT GCGTTGGCATGTCTT TERM 1363 1516666 - 1516643 - H 77 -9.5 -3.87608 | opp_overlap 1516643 1516665, overlap 1516642 CCTACTGAAAAAAAT GGGGGAGGC TCAAGC GCCTGCCCC TGCGTTGGCATGTCT TERM 1364 1517220 - 1517242 + G 83 -9 -4.2704 | overlap 1517228 AGCGGCCCACGGCTG CTGGCGGCCG ATC CGGCTGACGG TTTGTTGATGCTGCA Pput_1347 1516824 - 1518008 + | hypothetical protein Pput_1348 1519945 - 1518113 - | ABC transporter related Pput_1349 1520565 - 1520008 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Pput_1350 1521371 - 1520559 - | alpha/beta hydrolase fold Pput_1351 1522308 - 1521385 - | LysR family transcriptional regulator Pput_1352 1522357 - 1522671 + | hypothetical protein Pput_1353 1522768 - 1523382 + | NAD(P)H dehydrogenase (quinone) TERM 1365 1523436 - 1523456 + F 100 -11.8 -5.28176 | overlap 1523450 1523451 CCTTTGGGTGTACCT GCCCGGCT TGTAT GGCCGGGC TTTTTTATGCCTGGG TERM 1366 1523658 - 1523673 + G 71 -5.4 -4.43309 | gap 1 CTACCTGATAATCGT CGCGCTG ATC CAG-GCG TTTTCCTTCAGCTTG Pput_1354 1523638 - 1524513 + | carboxylate/amino acid/amine transporter TERM 1367 1525811 - 1525782 - f 81 -12.9 -3.62046 | overlap 1525783 GGATTCTCCGAACAA GTCAGCACAGGCC ATCT GACCTGTGCTGAA ATAGCCATCCGTCCA TERM 1368 1525810 - 1525783 - f 86 -16.4 -2.77013 | overlap 1525782 GATTCTCCGAACAAG TCAGCACAGGCC ATCT GACCTGTGCTGA AATAGCCATCCGTCC TERM 1369 1525987 - 1526013 + G 77 -15.2 -2.62263 | overlap 1525990 CGAGCCGCATTACCC TAAGGCTGGCGG TGG CCGCAAGCCTTA TCCTCTGGAAACCAT TERM 1370 1525990 - 1526010 + G 76 -12.5 -3.46602 | overlap 1525987 GCCGCATTACCCTAA GGCTGGCGG TGG CCGCAAGCC TTATCCTCTGGAAAC Pput_1356 1525853 - 1526836 + | transposase, IS4 family protein TERM 1371 1526847 - 1526863 + F 77 -12.3 -3.34043 | opp_overlap 1526847 CGTGAGTCCAGATAA CCAAGGC TTT GCCTTGG TTATCCAATAATCAG TERM 1372 1526863 - 1526847 - f 78 -12.3 -3.50393 | opp_overlap 1526847 CGTGAGTCCAGATAA CCAAGGC TTT GCCTTGG TTATCCAATAATCAG TERM 1373 1527276 - 1527235 - f 74 -11.6 -3.34043 | overlap 1527236 TGGATCAGTTTACAA TGCGGGGCGGATGATG AGTGGTGGAG CATCATCCGCCGCGCC CCTCAGATGGGCAGC TERM 1374 1527275 - 1527236 - f 80 -15.1 -2.60212 | overlap 1527235 GGATCAGTTTACAAT GCGGGGCGGATGATG AGTGGTGGAG CATCATCCGCCGCGC CCCTCAGATGGGCAG TERM 1375 1527343 - 1527368 + F 78 -6.1 -4.72272 | overlap 1527341 TTATTTTGGTCACTA GCTCAGCGCTA TTTT TGGCCTTGAGC TTTTTCATCAACCGA Pput_1358 1527555 - 1527914 + | cupin 2 domain-containing protein Pput_1359 1528947 - 1528057 - | 6-phosphogluconate dehydrogenase, NAD-binding Pput_1360 1530041 - 1528950 - | hypothetical protein Pput_1361 1530759 - 1530043 - | hypothetical protein TERM 1376 1530131 - 1530154 + g 81 -8 -4.46656 | opp_overlap 1530123 1530124, overlap 1530132 ATATCAAGGCCTAGC TCGCCTGCGG CTAG CCGCAGACGC TTTTCCTCTTCTAGG Pput_1362 1531493 - 1530756 - | LmbE family protein TERM 1377 1530986 - 1530966 - G 80 -6.1 -4.71061 | AGTGATATCCAAAAA TGTGTCTGG ACG CCAATCACA CTGCTCTGGCTGATG Pput_1363 1532747 - 1531521 - | outer membrane porin TERM 1378 1532800 - 1532773 - R 79 -10.6 -3.86897 | overlap 1532778 TCCAGGGCGCAGAAA TCCAAGGCTCTG CAAG CAGAGCCATGAA ACTATCAGGAAGGTT TERM 1379 1532795 - 1532778 - R 74 -11.3 -3.32997 | overlap 1532773 GGCGCAGAAATCCAA GGCTCTG CAAG CAGAGCC ATGAAACTATCAGGA Pput_1364 1534133 - 1532817 - | sodium:dicarboxylate symporter Pput_1365 1535050 - 1534187 - | amidohydrolase 2 Pput_1366 1536041 - 1535163 - | LysR family transcriptional regulator TERM 1380 1536230 - 1536267 + r 75 -9.9 -3.86194 | gap 1, overlap 1536233 GGGAGGCCACTACCT GCAAGGGCAA-TGTGCGT TTA ACGCACGCTTGCCCGTAC TTTCTCGCGGAAGTT Pput_1367 1536885 - 1536247 - | hypothetical protein Pput_1368 1537887 - 1536913 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1381 1537627 - 1537650 + g 70 -8 -3.96892 | overlap 1537628 1537630 1537641 AGGAGTGTTCGTGAC CCAGACGCCG TGGT CGGCGGCTGC TTTGTAGTCGACGTT TERM 1382 1537696 - 1537718 + g 77 -14.2 -2.91144 | opp_overlap 1537696 1537695, overlap 1537693 ATGGCGAGCAACAAT TCGCAGCTTC GGC GAGGCTGCGA TCATTTCAGCGCTGA Pput_1369 1539238 - 1537898 - | major facilitator transporter TERM 1383 1538501 - 1538527 + g 72 -7.2 -4.18488 | overlap 1538504 CATGTAATCACGCAC GAGCTCAGCGAA AGG TGCGCTGTGTTC TTTGTTCGCGTCGGT TERM 1384 1539274 - 1539298 + H 81 -4.3 -5.02074 | opp_overlap 1539280 1539281, overlap 1539279 1539281 TCACGTCCATTGTTA AAAAATGGGAC AGT GTCCTGTTTTG TTTTTTGAAGAATCC TERM 1385 1539279 - 1539293 + H 88 -4.2 -5.42198 | opp_overlap 1539280 1539281, overlap 1539274 1539281 TCCATTGTTAAAAAA TGGGAC AGT GTCCTG TTTTGTTTTTTGAAG TERM 1386 1539281 - 1539291 + H 71 -6.8 -4.32882 | opp_overlap 1539280 1539281, overlap 1539279 1539274 CATTGTTAAAAAATG GGAC AGT GTCC TGTTTTGTTTTTTGA Pput_1370 1539408 - 1540946 + | transcriptional regulator IclR-like protein Pput_1371 1541460 - 1542251 + | hypothetical protein Pput_1372 1542712 - 1543002 + | hypothetical protein TERM 1387 1543021 - 1543056 + F 72 -9.9 -3.61517 | TCAAAATCAGCACTC TG-GTGGTCGCTGCGCA CAGA TGC-CAGCGATCACGCA TTATTGGGCCGCCCT TERM 1388 1543118 - 1543101 - f 87 -9.8 -4.64861 | TGCGGGCAAAAGAAA GCCCGC TGCTAG GCGGGC AAGGGAGCTTCTATC Pput_1373 1543461 - 1543673 + | transposase IS3/IS911 family protein Pput_1374 1544902 - 1543706 - | transposase, mutator type TERM 1389 1545343 - 1545369 + H 95 -18.1 -3.53091 | opp_overlap 1545362 1545365 TGGCCACTAGTCTCA GCCGGTCGTTG CCATT CAACGACCGGC TTTGACAGGCCGACT TERM 1390 1545639 - 1545656 + G 73 -6.3 -4.25104 | gap 1 CGCTATGCGCCGAAG CCG-TTGC CCA GCAAGCGG TTTTGATGCAACCGA Pput_1375 1545548 - 1545790 + | hypothetical protein Pput_1376 1545887 - 1546156 + | hypothetical protein TERM 1391 1546310 - 1546294 - T 88 -15.1 -3.53012 | CCTCGTGTCGCGAAA GGGCCGC AAC GCGGCCC CGGGATTGATGCGCG TERM 1392 1546342 - 1546358 + T 82 -13.7 -3.53012 | opp_overlap 1546337, overlap 1546338 TAGTTGAAATTGCTG GGGCTGC TTT GCAGCCC TTTCGCGACACGAGG Pput_1377 1547810 - 1546509 - | MscS mechanosensitive ion channel Pput_1378 1547914 - 1549275 + | DEAD/DEAH box helicase domain-containing protein TERM 1393 1549336 - 1549278 - T 100 -21.8 -3.38812 | overlap 1549309 TGCTGCTGAATAAGA CTCACGCAGGCCCTTTGCAGAAGCGA CGCAAGT TCGCATCTGCGAAGGGCCTGCGCAGG CGACGAACGATCACT Pput_1379 1549619 - 1549347 - | hypothetical protein TERM 1394 1550082 - 1550066 - g 74 -5 -4.63486 | overlap 1550075 ATTTCTGCAAGAAAA GCCACC AAACG GGAGGC CAGGTACTATGACCA Pput_1380 1549835 - 1550113 + | hypothetical protein Pput_1381 1550091 - 1550345 + | hypothetical protein Pput_1382 1550422 - 1550817 + | hypothetical protein Pput_1383 1550923 - 1551849 + | hypothetical protein Pput_1384 1553121 - 1551949 - | hypothetical protein TERM 1395 1552738 - 1552719 - G 82 -10.7 -4.07568 | opp_overlap 1552717 1552725 CGGGTCCGGCGAAAA CCAGCGC TCCCAG GCGCTGG CGGTTGTGGGCAGTG Pput_1385 1553228 - 1554121 + | LysR family transcriptional regulator Pput_1386 1554246 - 1554374 + | hypothetical protein TERM 1396 1554386 - 1554415 + T 100 -19.3 -5.05601 | opp_overlap 1554386 CTGATTAACGACAAA GGCCGCTTCACCC GAGT GGGTGCAGCGGCC TTTTTGTGTCTGCTG TERM 1397 1554415 - 1554386 - T 100 -19.3 -4.08144 | opp_overlap 1554386 CTGATTAACGACAAA GGCCGCTTCACCC GAGT GGGTGCAGCGGCC TTTTTGTGTCTGCTG Pput_1387 1555880 - 1554501 - | Na+/solute symporter TERM 1398 1555917 - 1555950 + r 90 -8.8 -4.90381 | gap 1, overlap 1555920 TATTATGGCGAGATC GACCGCGCGGGCGTT TGCAC GGCGCCCG-GCGATC TTTTCTTGTGTTGGC Pput_1388 1556975 - 1556013 - | putative agmatinase TERM 1399 1556906 - 1556923 + g 71 -8.4 -3.90112 | opp_overlap 1556917 1556918 GGAGCATGGTGGCGA TGCCGC CGAAAC GCGGCA TTTCGTTGCCGCCCA Pput_1389 1557188 - 1558081 + | LysR family transcriptional regulator Pput_1390 1558180 - 1559784 + | methyl-accepting chemotaxis sensory transducer TERM 1400 1559814 - 1559787 - f 90 -14.8 -3.57561 | gap 1, opp_overlap 1559789 1559790, overlap 1559788 GTTCAACCGTTGAAA TCGCGGGGCCCGC AAA GCGGGCCCCG-GT TATGTGGCAAACTGT TERM 1401 1559813 - 1559788 - f 88 -18.3 -2.74322 | gap 1, opp_overlap 1559789 1559790, overlap 1559787 TTCAACCGTTGAAAT CGCGGGGCCCGC AAA GCGGGCCCCG-G TTATGTGGCAAACTG TERM 1402 1559789 - 1559813 + F 100 -18.5 -3.48593 | opp_overlap 1559788 1559787, overlap 1559790 TCAACCGTTGAAATC GCGGGGCCCGC AAA GCGGGCCCCGG TTATGTGGCAAACTG TERM 1403 1559790 - 1559812 + F 100 -22 -2.68942 | opp_overlap 1559788 1559787, overlap 1559789 CAACCGTTGAAATCG CGGGGCCCGC AAA GCGGGCCCCG GTTATGTGGCAAACT Pput_1391 1559849 - 1560448 + | DTW domain-containing protein Pput_1392 1561869 - 1560511 - | TolC family type I secretion outer membrane protein Pput_1393 1562546 - 1562181 - | hypothetical protein Pput_1394 1563141 - 1562554 - | yecA family protein TERM 1404 1563221 - 1563262 + H 70 -2.9 -4.72272 | gap 1, overlap 1563221 1563222 AGGGAACGTCTATCG CCGCGGTGCATGT-GCAGCA CGG TGCTGCGGTATACTTCGCGA TTTTTCATCCAGGGG TERM 1405 1563329 - 1563305 - H 76 -7 -4.56597 | opp_overlap 1563305 1563326 GCTGCCTGGCAAAAA CCGCTTACGC ATTTG GCGTGTGCGG GGCGGGTTTTTCGTC TERM 1406 1563935 - 1563969 + G 73 -8.5 -4.07562 | gap 1, opp_overlap 1563935, overlap 1563936 GAACCCGCGAGGAGA TCGTTCAGCG-CCTGC ACCT GCAGGGCGCCGAGCGC TTTCTGTCGAGTTTC TERM 1407 1564364 - 1564331 - g 78 -12.3 -3.80573 | gap 1, overlap 1564332 CCTACTACCAGGAAA CCGGCCGGGCCGGCCG TGA CGGCCTGCCCT-CCGA TGCCTGGATGGCCTA TERM 1408 1564363 - 1564332 - g 74 -13.6 -2.88023 | gap 1, overlap 1564331 CTACTACCAGGAAAC CGGCCGGGCCGGCCG TGA CGGCCTGCCCT-CCG ATGCCTGGATGGCCT Pput_1395 1563385 - 1565532 + | ATP-dependent DNA helicase RecQ Pput_1396 1565684 - 1566121 + | MarR family transcriptional regulator Pput_1397 1568341 - 1566155 - | patatin TERM 1409 1566506 - 1566476 - G 81 -11.8 -3.96148 | CCCGCCCATCACAAA GCTCGACGTCACCA CTT CGGTGTCGTCCAGC GTGCGCCCGTAGCGC TERM 1410 1568276 - 1568252 - G 74 -12.1 -3.49653 | AGCACCGCCAGACAA CACCAGGCCGA CCT TGGGCCTGGCG GGTTCCGCAGCGATT Pput_1398 1568409 - 1568690 + | hypothetical protein Pput_1399 1569581 - 1568691 - | hypothetical protein TERM 1411 1569675 - 1569729 + r 70 -9.9 -3.53012 | gap 1, opp_overlap 1569675 GCTTTCGCGGGTAAA CCCGCTCCTACAGGTTTTGCACAACC TTCA GGCGGGG-GCATCCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 1412 1569729 - 1569675 - R 70 -9.9 -3.53012 | gap 1, opp_overlap 1569675 GCTTTCGCGGGTAAA CCCGCTCCTACAGGTTTTGCACAACC TTCA GGCGGGGGCAT-CCTGTAGGAGCGGG TTTACCCGCGAAAGG Pput_1400 1570569 - 1569802 - | helix-turn-helix domain-containing protein TERM 1413 1570053 - 1570012 - G 91 -16 -3.57792 | gap 2 GCACTCAGTGGTAAA GCGCGCATGCAGCCGGGC ACTGGACA GCCCGGC-G-ATGCGCGC CAGGTCAGCTACCTG Pput_1401 1570697 - 1571494 + | metallophosphoesterase Pput_1402 1571844 - 1571533 - | hypothetical protein TERM 1414 1571673 - 1571641 - G 74 -6.1 -4.40561 | overlap 1571642 1571659 1571663 CTTCTCGAAAAAGAA GTGCCCGACCCAGGC AAA GCCATAGCCGAACAC CGGCACGGCCAGCAG Pput_1403 1571998 - 1573059 + | helix-turn-helix domain-containing protein Pput_1404 1574470 - 1573016 - | TrkH family potassium uptake protein TERM 1415 1574024 - 1573987 - G 71 -12.7 -3.01791 | gap 1 ATTCGGTCTGGAACA GGCGCATGCCGCCGATGC GCA GCAGCGGCAGGAT-CGCC ACCGCCATGGCGATG TERM 1416 1574677 - 1574709 + G 74 -5.4 -4.65916 | gap 1, overlap 1574685 1574686 CCAGGCTGCCCTGCG CGCCCCGGATCACGG CCAG CTGCGG-CCGTGGCG TTTTCTTACCATCGA Pput_1405 1574573 - 1575130 + | nitroreductase Pput_1406 1576601 - 1575261 - | integral membrane sensor signal transduction histidine kinase TERM 1417 1576645 - 1576618 - R 100 -24.2 -4.24002 | TCCTAAACGGGAAAA GCCCGGCCCGCA GTGA TGCGGGCCGGGC ACGGGGCGGACAGCT Pput_1407 1577076 - 1576660 - | protein of unknown function, Spy-related Pput_1408 1577914 - 1577237 - | two component transcriptional regulator Pput_1409 1578202 - 1577927 - | hypothetical protein Pput_1410 1578546 - 1578247 - | YciI-like protein TERM 1418 1578477 - 1578499 + g 83 -11.9 -4.0896 | GCAGGCGTTCGATGT GCGCCGGGC GGGCA GCCAGGCGC TTTTCCAGGGAGTTT Pput_1411 1579141 - 1578548 - | intracellular septation protein A Pput_1412 1579209 - 1580069 + | phosphotransferase domain-containing protein Pput_1413 1580047 - 1580712 + | Sua5/YciO/YrdC/YwlC family protein Pput_1414 1580709 - 1581563 + | chromosome segregation and condensation protein ScpA Pput_1415 1581550 - 1582317 + | putative transcriptional regulator TERM 1419 1582448 - 1582438 - f 71 -8.2 -3.96327 | AGCGGCCAGCACAAA GCCC ATT GGGC AGAAAATCATGCCCA TERM 1420 1582940 - 1582919 - g 72 -7.2 -4.18506 | CCACGGCCAAAAGAA GGCCGCTG GATCAA CATCGGCC GCCTCGACATCAACA Pput_1416 1582583 - 1583650 + | RNA-binding S4 domain-containing protein TERM 1421 1583690 - 1583675 - f 72 -10.4 -3.39895 | opp_overlap 1583675 GTGGTCATCAAGGAA CCAGCC TTCG GGCTGG TTTTTTATGCCTGCG TERM 1422 1583675 - 1583690 + F 100 -10.4 -5.28176 | opp_overlap 1583675 GTGGTCATCAAGGAA CCAGCC TTCG GGCTGG TTTTTTATGCCTGCG Pput_1417 1584288 - 1585706 + | amino acid permease-associated region TERM 1423 1585756 - 1585731 - T 75 -8.9 -4.13945 | opp_overlap 1585731 AGCGGTATGCGAAAA CCCGGAGTCAG GTGG CTGGCTTCGGG TTTTTTGTTGCCTGT TERM 1424 1585731 - 1585756 + T 100 -13.3 -5.49234 | opp_overlap 1585731 AGCGGTATGCGAAAA CCCGGAGTCAG GTGG CTGGCTTCGGG TTTTTTGTTGCCTGT Pput_1418 1586729 - 1585845 - | LysR family transcriptional regulator Pput_1419 1586882 - 1589902 + | FAD linked oxidase domain-containing protein Pput_1420 1591237 - 1590035 - | hypothetical protein TERM 1425 1591245 - 1591298 + r 86 -15.3 -3.34398 | opp_overlap 1591263 1591292, overlap 1591242 GCTGGCATTGGGGAT CCGTTGCTGCGGTAAGGATGGCAGT GTGT GCCGCCATCTTAACCACAGCAAGGG TGTTTGCGGGCGAAG Pput_1421 1595527 - 1591328 - | hypothetical protein TERM 1426 1594866 - 1594885 + g 74 -12.8 -3.36505 | CGTTCGCGGGCAGTG GGCGGGCG GTAA CGCCTGCC TTGTGCATAGACTGT Pput_1422 1595894 - 1595685 - | hypothetical protein TERM 1427 1595964 - 1595999 + r 82 -15.6 -2.84098 | gap 1, opp_overlap 1595975, overlap 1595975 CAGCGCACATATGCC CCATGAAAAAAGGGGCC TCT GGCCCCTTCTTTC-TGG TGATTACTTCCGGCC TERM 1428 1595989 - 1595975 - R 100 -12.8 -5.14563 | opp_overlap 1595964 1595975 TGCCCCATGAAAAAA GGGGCC TCT GGCCCC TTCTTTCTGGTGATT TERM 1429 1595975 - 1595989 + r 91 -12.8 -4.12857 | opp_overlap 1595975, overlap 1595964 TGCCCCATGAAAAAA GGGGCC TCT GGCCCC TTCTTTCTGGTGATT phhB 1596359 - 1596003 - | pterin-4-alpha-carbinolamine dehydratase phhA 1597187 - 1596399 - | phenylalanine 4-monooxygenase TERM 1430 1597191 - 1597207 + H 82 -5.8 -4.97957 | CGTCTGTTTCATGAG GCTCTC CTGGT GAGGGC TTTTCTTGTTATGTG TERM 1431 1597743 - 1597782 + G 74 -15 -2.61274 | overlap 1597728 1597742 1597772 TGCTGTCGATCGACA TGGGCGGCAGCATCGTTG CGGC CAACCGTGCCGCCGCTCA GTTGCTTGGCGTGCG Pput_1425 1597445 - 1599004 + | transcriptional regulator, TyrR TERM 1432 1599024 - 1599040 + T 78 -12.3 -3.53012 | TGGGCAAAGAACCTG GGACTGC GTT GCAGTCC TTTCGCGACACAAGG TERM 1433 1599112 - 1599054 - T 90 -16.1 -3.48276 | gap 1, opp_overlap 1599055 1599056 1599105 1599108, overlap 1599055 CCTTTCGCGACACAA GGCCGCTCCCACAGGTAATACGCTGTGC TCTG GCTGGGCGCATTACCTGTGGGAGCAAC- TGTCTTGCTCAATTT TERM 1434 1599055 - 1599112 + T 89 -17.7 -3.14982 | opp_overlap 1599054 1599055, overlap 1599056 1599105 1599108 CTTTCGCGACACAAG GCCGCTCCCACAGGTAATACGCTGTGC TCTG GCTGGGCGCATTACCTGTGGGAGCAAC TGTCTTGCTCAATTT TERM 1435 1599112 - 1599055 - T 100 -22.1 -2.68823 | opp_overlap 1599055 1599056 1599105 1599108, overlap 1599054 CTTTCGCGACACAAG GCCGCTCCCACAGGTAATACGCTGTGC TCTG GCTGGGCGCATTACCTGTGGGAGCAAC TGTCTTGCTCAATTT Pput_1426 1600205 - 1599255 - | transposase, IS111A/IS1328/IS1533 Pput_1427 1600722 - 1600468 - | hypothetical protein TERM 1436 1600853 - 1600880 + H 72 -6.2 -4.38712 | overlap 1600854 TGTTTCCAGTTGTTA ATCGCCTTGCCG TTGC TGGCGAGGTGAA TTTTATGGCGGTGGC acsA 1600991 - 1603081 + | acetyl-CoA synthetase TERM 1437 1603703 - 1603690 - g 72 -2.3 -4.72986 | overlap 1603692 CAGGCTGATGAAAAA CCGCT GAAA ATCGG CATCGAAGCGGCCTA TERM 1438 1604109 - 1604062 - g 72 -12 -3.33696 | gap 1, overlap 1604077 CGCTTCGCCAAGGAA GTGCTGGGCGCCA-AAGGTGCCA CCG TGGTGCCTTACGGCACCCAGAAC GAAATCTACCTGGAC Pput_1429 1603618 - 1604403 + | cationic amino acid ABC transporter, periplasmic binding protein TERM 1439 1604427 - 1604461 + F 100 -14.4 -4.96646 | opp_overlap 1604439 GTTTCACCTGTGCAA TGGTGCAAACAGCAGA GGC TCTGAGGTTTGCACCA TTTTTCATTCTCTAG Pput_1430 1604492 - 1605181 + | polar amino acid ABC transporter, inner membrane subunit Pput_1431 1605178 - 1605876 + | polar amino acid ABC transporter, inner membrane subunit Pput_1432 1605899 - 1606663 + | ABC transporter related TERM 1440 1606718 - 1606688 - f 78 -12.5 -3.27475 | overlap 1606686 TTTTGCACCAGAATA GGGCATGCTGCGC GGCGA GCGCAGCCTGACC CGGCGCACAGACTCG TERM 1441 1607608 - 1607630 + G 76 -5.5 -4.62783 | overlap 1607598 1607601 CAGATCGGGCTGTCC TGTGGCTTC TCCTC GGGGCCGCA TTTTTCCAGTGCCTA Pput_1433 1606762 - 1607742 + | helix-turn-helix domain-containing protein TERM 1442 1607819 - 1607794 - f 100 -20.5 -3.53091 | ATGTTGGGGTGCAAA TCGAGCGCCGC GCGG GCGGCGCTCGA TCTCCCCGTCAACAC argD 1608115 - 1609335 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Pput_1435 1609483 - 1610502 + | arginine N-succinyltransferase TERM 1443 1610732 - 1610717 - g 81 -4 -5.00616 | gap 1 GTTGGGCGGAAAAAA GCTTTCG TGG CGAA-GC CGAGCGTGGCGACAC TERM 1444 1611095 - 1611122 + G 78 -3.2 -5.03314 | overlap 1611096 ACGAGCAGGGCCGTT CGCCGTTCTGGG AAAG CCTGGGCCGGCA TTTTTTCAAGATGGA Pput_1436 1610581 - 1611609 + | arginine N-succinyltransferase Pput_1437 1611610 - 1613073 + | succinylglutamic semialdehyde dehydrogenase TERM 1445 1613633 - 1613672 + G 88 -4 -5.36441 | gap 1, opp_overlap 1613635, overlap 1613620 1613636 GGGCGCGGCCAACCA CACGCGCTTCTGCCGCGCC TAT GGCGAGGCTGGCGTG-GAG TTTTTTGTCTACGGC Pput_1438 1613097 - 1614446 + | succinylarginine dihydrolase Pput_1439 1614461 - 1614751 + | hypothetical protein TERM 1446 1614980 - 1614949 - g 81 -11.6 -3.91911 | gap 1 TTCATGGCAACGAAA CAGC-GCCGATCGAA TTG CTCGAACGGCTGCTG CACGGCGTGGCCAAC Pput_1440 1614762 - 1615769 + | succinylglutamate desuccinylase TERM 1447 1618374 - 1618343 - g 72 -12.2 -3.36803 | opp_overlap 1618335 CAACCTGATCGACAA GCTGTCGGCTGTGC TTGA GCGCAACCGCCAGC TGGAGAAGCAGCTGG TERM 1448 1618398 - 1618382 - g 72 -12.3 -3.31144 | overlap 1618394 CCGCCAGCTGGAGAA GCAGCTG GAA CAGCTGC AGGCCAAGGCCGCCA TERM 1449 1618663 - 1618653 - g 73 -8.2 -4.00756 | overlap 1618654 GATCTGATGAAACAA GCCG CTG CGGC GGTGGGTGGCAAGGG alaS 1616085 - 1618778 + | alanyl-tRNA synthetase TERM 1450 1618779 - 1618835 + F 75 -11.7 -3.43246 | gap 2, opp_overlap 1618784, overlap 1618781 GAGCAGGGACTTTGA GATGAGGGGGTGGAGGGTCTAGTGGCC ACACA GGCCACTC--CCGTCCACCCCTTCATG TTGGATTGTTTTTTG TERM 1451 1618781 - 1618833 + F 83 -14.3 -3.25449 | gap 2, opp_overlap 1618784, overlap 1618779 GCAGGGACTTTGAGA TGAGGGGGTGGAGGGTCTAGTGGCC ACACA GGCCACTC--CCGTCCACCCCTTCA TGTTGGATTGTTTTT Pput_1442 1618881 - 1620116 + | aspartate kinase TERM 1452 1620125 - 1620156 + F 100 -15.8 -3.96148 | opp_overlap 1620117, overlap 1620127 CGAGTAAGGCGCTGC CTGGAAGGGCGCGG CTTG CCGCGCCCTTCGCG TTTCTGCTCGCCGCG TERM 1453 1620127 - 1620155 + F 87 -16.8 -2.97475 | gap 1, opp_overlap 1620117, overlap 1620125 AGTAAGGCGCTGCCT G-GAAGGGCGCGG CTTG CCGCGCCCTTCGC GTTTCTGCTCGCCGC Pput_1443 1620283 - 1620471 + | carbon storage regulator, CsrA TERM 1454 1620814 - 1620830 + F 88 -10.9 -4.41616 | overlap 1620826 1620829 AATCCTGCTGAGTCC GCCACTT TTG AAGTGGC TTTGTTTGCAAGGCT TERM 1455 1621282 - 1621301 + F 100 -15 -5.38054 | opp_overlap 1621282 ATACCCCATCAAAAA GCCCGCTC AATA GAGCGGGC TTTTTGTTTGTGCGC TERM 1456 1621301 - 1621282 - f 100 -15 -4.74132 | opp_overlap 1621282 ATACCCCATCAAAAA GCCCGCTC AATA GAGCGGGC TTTTTGTTTGTGCGC TERM 1457 1621536 - 1621548 + F 70 -10.5 -3.28712 | TGATTGCGCCCGTCA GCCCC GCC GGGGC TTGTGGAAAACCACC TERM 1458 1623039 - 1623063 + G 79 -8.6 -4.33755 | overlap 1623032 1623040 GGGCGAGCGTGATGA TCACTGCTGT GACCG ACAGCGGTGG TTTCTTCATCTTCCT Pput_1444 1621664 - 1623106 + | magnesium transporter TERM 1459 1623166 - 1623199 + T 100 -21.3 -3.05596 | opp_overlap 1623160 1623175, overlap 1623168 1623175 TGCCAATCAGTCATC CACAAAAAAGCCAGC TTAC GCTGGCTTTTTTGTG TTCGCTGCAGGCCTC TERM 1460 1623168 - 1623197 + T 90 -18.1 -3.08679 | opp_overlap 1623160 1623175, overlap 1623166 1623175 CCAATCAGTCATCCA CAAAAAAGCCAGC TTAC GCTGGCTTTTTTG TGTTCGCTGCAGGCC TERM 1461 1623190 - 1623175 - T 100 -10.4 -5.28176 | opp_overlap 1623168 1623166 1623175, overlap 1623160 GTCATCCACAAAAAA GCCAGC TTAC GCTGGC TTTTTTGTGTTCGCT TERM 1462 1623175 - 1623190 + T 100 -10.4 -5.48063 | opp_overlap 1623175 1623160, overlap 1623168 1623166 GTCATCCACAAAAAA GCCAGC TTAC GCTGGC TTTTTTGTGTTCGCT Pput_1445 1623530 - 1623213 - | Arc domain-containing protein Pput_1446 1623884 - 1624477 + | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN TERM 1463 1624554 - 1624527 - T 79 -10.6 -3.97947 | overlap 1624528 TTGAGGCATGACAAA CGCCAGCATGCT GGTT AACATGCTGGCC ATCCCGCTGTGCAGC TERM 1464 1624553 - 1624528 - T 80 -14.1 -2.98447 | overlap 1624527 TGAGGCATGACAAAC GCCAGCATGCT GGTT AACATGCTGGC CATCCCGCTGTGCAG Pput_1447 1626130 - 1624748 - | amino acid permease-associated region Pput_1448 1626962 - 1626435 - | hypothetical protein Pput_1449 1627178 - 1628176 + | diguanylate cyclase with PAS/PAC sensor TERM 1465 1628362 - 1628333 - T 100 -18.5 -5.26875 | GCCTGAATGAAAAAA GACCCGCAGCGCC TCTC GGCGCAGCGGGCC AAATCGGCCTCGGCC Pput_1450 1629766 - 1628387 - | dihydrolipoamide dehydrogenase Pput_1451 1631040 - 1629769 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Pput_1452 1632099 - 1631041 - | transketolase, central region Pput_1453 1633333 - 1632101 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) TERM 1466 1633286 - 1633266 - G 72 -2.3 -4.7497 | overlap 1633267 CGCAGGTAGGAAAAA TCGGTCTGG CAG CCTGGCCGG CCGGTGGGCTCGGGC TERM 1467 1633984 - 1633974 - g 79 -8.2 -4.37092 | AGGTGCGCTACAAAA CGGC GTT GCCG TTGCCAGCCAATGGC Pput_1454 1633532 - 1634017 + | AsnC family transcriptional regulator Pput_1455 1634192 - 1635514 + | glutamate--putrescine ligase TERM 1468 1636207 - 1636228 + G 72 -2.1 -4.72272 | gap 1, overlap 1636207 1636208 CCCGGCGCCCTTGCG C-CCGGCACC GAT GGAGCCGAAG TTTTTCATCAAGCGC Pput_1456 1635647 - 1636987 + | major facilitator transporter TERM 1469 1637063 - 1637032 - T 100 -16 -4.41609 | opp_overlap 1637033 1637038, overlap 1637033 1637038 CAGCAGAAACACAAA TGAAAACGCCACCT CAGC AGGTGGCGTTTTCT GTTTTACCGACCGAC TERM 1470 1637062 - 1637033 - T 100 -19.5 -3.23881 | opp_overlap 1637033 1637038, overlap 1637032 1637038 AGCAGAAACACAAAT GAAAACGCCACCT CAGC AGGTGGCGTTTTC TGTTTTACCGACCGA TERM 1471 1637033 - 1637062 + T 100 -19.5 -3.63744 | opp_overlap 1637033 1637032 1637038, overlap 1637038 AGCAGAAACACAAAT GAAAACGCCACCT CAGC AGGTGGCGTTTTC TGTTTTACCGACCGA TERM 1472 1637057 - 1637038 - T 100 -13.6 -4.68919 | opp_overlap 1637033 1637038, overlap 1637033 1637032 AAACACAAATGAAAA CGCCACCT CAGC AGGTGGCG TTTTCTGTTTTACCG TERM 1473 1637038 - 1637057 + T 100 -13.6 -4.89567 | opp_overlap 1637038 1637033 1637032, overlap 1637033 AAACACAAATGAAAA CGCCACCT CAGC AGGTGGCG TTTTCTGTTTTACCG Pput_1457 1637824 - 1637081 - | type IV pilus assembly PilZ Pput_1458 1638371 - 1637904 - | FlgN family protein Pput_1459 1638735 - 1638421 - | anti-sigma-28 factor, FlgM TERM 1474 1638634 - 1638648 + g 74 -4.9 -4.58395 | overlap 1638627 GTCTTTCACCGCTTC CTGGC TGGCT GCCGG TTTTTCGGCGCTGCC flgA 1639652 - 1638900 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1475 1639351 - 1639375 + g 100 -17.1 -3.60098 | overlap 1639352 CGTATCCGTACCGTC ACCCGGCCCAG CGG CTGGGCCGGGC TTTCCAGTGAGGCGT TERM 1476 1639352 - 1639374 + g 91 -20.6 -2.75844 | overlap 1639351 GTATCCGTACCGTCA CCCGGCCCAG CGG CTGGGCCGGG CTTTCCAGTGAGGCG TERM 1477 1639798 - 1639823 + G 70 -9.8 -3.55761 | gap 1 TCGCCTGGAATTGCT GCTGTTCCGCC TCAAT GGCG-AACAGC TTTACGGCATCAATG Pput_1461 1639730 - 1640659 + | putative CheW protein TERM 1478 1640684 - 1640664 - f 81 -15.4 -2.75382 | opp_overlap 1640659, overlap 1640661 CAGCGCATTGAAGCA GCCGGGGG CATGC CCCCCGGC ACCAGTGATTGAAAA Pput_1462 1640712 - 1641539 + | protein-glutamate O-methyltransferase TERM 1479 1641547 - 1641570 + F 100 -11 -5.31519 | opp_overlap 1641547 CCAAGTAAGCACGAA GGCCGGTATC GAGA GATGCCGGTC TTTTTATTTGCCTAT TERM 1480 1642078 - 1642053 - g 71 -6 -4.2828 | opp_overlap 1642062, overlap 1642054 TGGTATCCACGAAAA GGCCCTGGGC TTCCGC GCCCAGCGCG CCGAGGTGTTGGCCA flgB 1642012 - 1642422 + | flagellar basal body rod protein FlgB flgC 1642425 - 1642868 + | flagellar basal body rod protein FlgC flgD 1642884 - 1643588 + | flagellar basal body rod modification protein Pput_1467 1643620 - 1645374 + | flagellar basal body FlaE domain-containing protein TERM 1481 1645396 - 1645429 + F 83 -9 -4.56597 | gap 1, overlap 1645400 TCGTTCGAGTGAGTG CAGGCGAACCCCTTT CTCGT GAAGGGGTTCGT-TG TTTTTGCAGGAGGGG TERM 1482 1645400 - 1645426 + F 95 -13.1 -4.40561 | overlap 1645396 TCGAGTGAGTGCAGG CGAACCCCTTT CTCGT GAAGGGGTTCG TTGTTTTTGCAGGAG Pput_1468 1645447 - 1645635 + | hypothetical protein TERM 1483 1645685 - 1645660 - f 73 -8.3 -4.05788 | overlap 1645683 TGCCTGCAAATGAAA CCTTTTTGCCG CCAA CGGCAAAACAG CGCCGGATAACCGGC TERM 1484 1645705 - 1645683 - f 75 -9.1 -4.19238 | gap 1, opp_overlap 1645695 1645702, overlap 1645660 1645686 1645696 CCGCCAACGGCAAAA CAG-CGCCGG ATAA CCGGCGGCCG TCGCTGCGCGGGCTT TERM 1485 1645701 - 1645686 - f 71 -11.8 -2.81289 | opp_overlap 1645695, overlap 1645683 1645696 CCAACGGCAAAACAG CGCCGG ATAA CCGGCG GCCGTCGCTGCGCGG TERM 1486 1645729 - 1645744 + F 84 -6.8 -4.86773 | overlap 1645714 CGGGCTTTCTCAACT GCCCGT ATTC ATGGGC TTTTTCCTGCTTTTG TERM 1487 1646371 - 1646351 - g 71 -8.9 -3.8377 | opp_overlap 1646352, overlap 1646362 AACCCCGACACCAAA GGCCTGACC AAG GGCCAGGAC GGGCTGATTCACACC flgF 1645841 - 1646581 + | flagellar basal body rod protein FlgF flgG 1646630 - 1647415 + | flagellar basal body rod protein FlgG flgH 1647452 - 1648147 + | flagellar basal body L-ring protein flgI 1648160 - 1649269 + | flagellar basal body P-ring protein flgJ 1649281 - 1650435 + | peptidoglycan hydrolase flgK 1650448 - 1652478 + | flagellar hook-associated protein FlgK flgL 1652492 - 1654057 + | flagellar hook-associated protein FlgL Pput_1476 1654185 - 1657763 + | glycosyl transferase family protein TERM 1488 1658818 - 1658861 + G 70 -13.2 -2.94726 | overlap 1658813 1658811 CTGAGCCACCGCTAT TGGCAGGCCTTGGCGTTGAG CCTG TTCAACCGCGAGGTCTGCCA TCTGCTGTTGTCCAC Pput_1477 1657816 - 1660533 + | hypothetical protein TERM 1489 1660685 - 1660695 + G 75 -4 -4.72272 | overlap 1660670 TTGCCCGGTCAGGCT GATT GGC AATC TTTTTGCTAGACAAC Pput_1478 1660548 - 1660784 + | hypothetical protein Pput_1479 1660781 - 1661551 + | glucose-1-phosphate cytidylyltransferase Pput_1480 1661548 - 1662609 + | CDP-glucose 4,6-dehydratase TERM 1490 1662674 - 1662686 + G 80 -4.7 -4.87665 | overlap 1662670 TATGCCGAGTTGGAG CTGGC CGC GCCCG TTTTTGTACCTGGCC Pput_1481 1662602 - 1663924 + | DegT/DnrJ/EryC1/StrS aminotransferase Pput_1482 1664016 - 1667504 + | glycosyl transferase family protein Pput_1483 1667659 - 1668768 + | N-acetylneuraminic acid synthase domain-containing protein Pput_1484 1668768 - 1670600 + | thiamine pyrophosphate binding domain-containing protein TERM 1491 1670738 - 1670770 + G 89 -15 -3.86346 | gap 1, opp_overlap 1670749, overlap 1670728 CGTAGCCTGGCCGCC GCCGCACAGCAGCAA GGTA TTGCTGTTG-GCGGC TTTGTAGAGACATCG Pput_1485 1670600 - 1671730 + | FkbM family methyltransferase TERM 1492 1671745 - 1671759 + G 77 -2.7 -5.00616 | overlap 1671746 ATGAACCTGCTATTG ACCGG CGGTA CCGGC TTTTTTGGCAAGGCG TERM 1493 1671845 - 1671855 + G 71 -8.2 -3.85817 | CGGTATTGAGCCGGT CGCC AGA GGCG TTTCTGACCCGGCAT TERM 1494 1672567 - 1672543 - g 88 -7.2 -4.91109 | CTGTCACCACAAAAA CCTGTGCA CATCGCAGC TGCACAGG CTGCCGTGGGGAGTT Pput_1486 1671730 - 1672683 + | NAD-dependent epimerase/dehydratase TERM 1495 1673273 - 1673263 - g 74 -2.4 -4.89852 | overlap 1673223 1673222 CGATATCGACAAAAA GCCC ACC GTGC CCGGTACCAGCAGCG Pput_1487 1672754 - 1673656 + | hypothetical protein Pput_1488 1673871 - 1674806 + | Beta-ketoacyl-acyl-carrier-protein synthase I TERM 1496 1674827 - 1674847 + F 95 -12.6 -4.65153 | opp_overlap 1674827 CGTCGCCTTCAACAA CGCCGTCA TCGTC TGACGGCG TTTTACTTTCTATCC TERM 1497 1674847 - 1674827 - f 81 -12.6 -3.61398 | opp_overlap 1674827 CGTCGCCTTCAACAA CGCCGTCA TCGTC TGACGGCG TTTTACTTTCTATCC TERM 1498 1674910 - 1674931 + F 100 -3.7 -5.81032 | gap 1, overlap 1674913 ACTCCTTGATTTCAT TGGACTGGCA CGG TGCCAG-CAA TTTTTTTTGAAATTG TERM 1499 1675269 - 1675259 - g 78 -4.6 -4.72986 | overlap 1675246 CATGGCGATCAAAAA CGCC AAC GACG CTATCTCCATCGCCC Pput_1489 1675059 - 1675910 + | flagellin TERM 1500 1675926 - 1675959 + F 100 -18.9 -4.49389 | TCGCTGATGGTGATC GGCGGGGGAGTGCAT TCTA AGGCACTTCCCCGCC TTTTCGTTATGAGGT Pput_1490 1675982 - 1676359 + | flagellar protein FlaG protein Pput_1491 1676441 - 1677853 + | flagellar hook-associated 2 domain-containing protein TERM 1501 1677908 - 1677880 - f 100 -16.8 -4.18018 | gap 1, opp_overlap 1677880 TTTTGCCATGTAAAA GCCCGGCAGCGAC CCTT GTCGCT-CCGGGC TTTTTGCGTTGGCAC TERM 1502 1677880 - 1677908 + F 100 -16.8 -4.74103 | gap 1, opp_overlap 1677880 TTTTGCCATGTAAAA GCCCGGCAGCGAC CCTT GTCGCT-CCGGGC TTTTTGCGTTGGCAC TERM 1503 1678123 - 1678157 + G 71 -10.9 -3.40403 | opp_overlap 1678122, overlap 1678126 GGCCCAGGCCAAAGG TGCCATCGC-GCGCAAT GAC ATTGCGCAGCGA-GGTA TTCTGCTCGGCAAGG fliS 1677992 - 1678387 + | flagellar protein FliS Pput_1493 1678402 - 1678698 + | hypothetical protein Pput_1494 1678868 - 1680343 + | sigma-54 dependent trancsriptional regulator TERM 1504 1680353 - 1680408 + F 100 -20.4 -2.87132 | GATTGACGCCTGGCG GTTGCCTGTGCCGGCTTCTTCGCGGG CGTG CCCGCGAAGAGGCCGGCACAAATCCC TATCTCCGGCACGGC Pput_1495 1680484 - 1681701 + | PAS/PAC sensor signal transduction histidine kinase Pput_1496 1681701 - 1683056 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1505 1683085 - 1683140 + F 100 -24 -3.55447 | overlap 1683086 TGCAACTGGCGCGGA CCTCTGTGGGAGCGGCCTTGCGCCCC TATC GCGACGCAAGGCCGCTCCCACAGGAA TTGTGTGATCCCTGG TERM 1506 1683086 - 1683139 + F 100 -27.5 -2.72947 | overlap 1683085 GCAACTGGCGCGGAC CTCTGTGGGAGCGGCCTTGCGCCCC TATC GCGACGCAAGGCCGCTCCCACAGGA ATTGTGTGATCCCTG fliE 1683251 - 1683583 + | flagellar hook-basal body protein FliE TERM 1507 1683645 - 1683664 + G 73 -10.7 -3.61371 | opp_overlap 1683635, overlap 1683650 1683657 CCAAAGCTGGCTCGC CAGCGGC CAAGCC GCCGCTG TTTGGCATGGCGTTT fliF 1683599 - 1685377 + | flagellar MS-ring protein fliG 1685370 - 1686389 + | flagellar motor switch protein G fliH 1686552 - 1687346 + | flagellar assembly protein H fliI 1687336 - 1688691 + | flagellum-specific ATP synthase fliJ 1688698 - 1689150 + | flagellar biosynthesis chaperone Pput_1503 1689458 - 1689763 + | anti-sigma-factor antagonist Pput_1504 1689772 - 1691463 + | response regulator receiver protein TERM 1508 1691663 - 1691645 - g 78 -10.2 -4.08767 | TGCACGCGGCCAAAA GCGCCGAG GAG CTTGGCGC GGCAGCCCACAGTTT Pput_1505 1691521 - 1691859 + | Hpt protein Pput_1506 1691930 - 1693195 + | flagellar hook-length control protein TERM 1509 1693477 - 1693490 + G 71 -5.9 -4.26076 | overlap 1693474 1693477 CAAGCTGATCCTGCT GGCTG TCGT CGGCC TTTTGCTGGCGATCG fliL 1693415 - 1693912 + | flagellar basal body-associated protein FliL fliM 1693922 - 1694890 + | flagellar motor switch protein FliM fliN 1694938 - 1695402 + | flagellar motor switch protein Pput_1510 1695415 - 1695849 + | flagellar biosynthesis protein, FliO fliP 1695849 - 1696604 + | flagellar biosynthesis protein FliP fliQ 1696626 - 1696895 + | flagellar biosynthesis protein FliQ TERM 1510 1697567 - 1697584 + G 76 -6.3 -4.42386 | GTTTCCCGTTGACCC TGGTCAT GGGT ATGGCCA TTTTCTGGATCGGCC fliR 1696903 - 1697679 + | flagellar biosynthesis protein FliR flhB 1697682 - 1698824 + | flagellar biosynthesis protein FlhB TERM 1511 1699020 - 1699000 - f 78 -14 -2.64155 | opp_overlap 1699002, overlap 1698997 1698996 CTTCTTGCAAAGCCA CGCCCAGG CGCCC CCTGGGCG TCAAAGTTTTGCATC TERM 1512 1699106 - 1699087 - g 70 -10.6 -3.62522 | opp_overlap 1699102 1699104, overlap 1699076 CAACGCCCGCAACAA CCTGGCCG GGCT CGGCCGGG GCAACCTGGGGGTGC Pput_1515 1699049 - 1699312 + | flagellar biosynthesis pathway component FlhA-like protein TERM 1513 1699357 - 1699374 + T 70 -10.5 -3.29739 | opp_overlap 1699353, overlap 1699351 ATTGCTCAAGATCGA GCGCCGT TTGA GCGGCGC TTAATCTCAATTGGG Pput_1516 1700380 - 1699466 - | D-alanine--D-alanine ligase Pput_1517 1701540 - 1700377 - | aminotransferase, class V Pput_1518 1702429 - 1701551 - | hypothetical protein Pput_1519 1703656 - 1702463 - | Cys/Met metabolism pyridoxal-phosphate-dependent enzyme Pput_1520 1705259 - 1703631 - | hypothetical protein TERM 1514 1704769 - 1704780 + g 74 -5.8 -4.49556 | overlap 1704765 TGGTGTTTGACGAGG GAGG GTAG CCTC TTTCTTTCGTCAGCA TERM 1515 1705277 - 1705294 + H 74 -3.3 -4.97383 | opp_overlap 1705279, overlap 1705280 TCTTCCATTCCTGAA TATCGGC AAAT GCCGTTG TTATTTTTTTTGGAT TERM 1516 1705280 - 1705291 + H 79 -7.2 -4.53495 | opp_overlap 1705279, overlap 1705277 TCCATTCCTGAATAT CGGC AAAT GCCG TTGTTATTTTTTTTG Pput_1521 1705353 - 1706411 + | D-alanine--D-alanine ligase Pput_1522 1707209 - 1706406 - | GntR family transcriptional regulator TERM 1517 1707180 - 1707196 + g 73 -10.9 -3.56568 | opp_overlap 1707179 1707178 ACCAATCGAGTAATT GGCATGA TGT TCATGCC TTTGAGCAGTCATTG TERM 1518 1707488 - 1707468 - g 71 -14 -2.64155 | opp_overlap 1707470, overlap 1707465 1707464 CTTCTTGCAAAGCCA CGCCCAGG CGCCC CCTGGGCG TCAAAGTTTTGCATC flhA 1707400 - 1709646 + | flagellar biosynthesis protein FlhA flhF 1709658 - 1710965 + | flagellar biosynthesis regulator FlhF Pput_1525 1711059 - 1711892 + | cobyrinic acid a,c-diamide synthase fliA 1711889 - 1712629 + | flagellar biosynthesis sigma factor TERM 1519 1712680 - 1712701 + F 84 -13.7 -3.59315 | CGAATTGAATGAGTG CGTGCTCGG TAGG CCGAGCGCG TTTGAGACTGCTTGG TERM 1520 1712890 - 1712865 - g 70 -7.5 -4.09685 | GCCGATGCTGGAAAA CGGTCACTACG ACTT CCTGGTGACCG ACTGGAACATGCCGG Pput_1527 1712725 - 1713111 + | response regulator receiver protein Pput_1528 1713133 - 1713921 + | chemotaxis phosphatase, CheZ Pput_1529 1713934 - 1716177 + | CheA signal transduction histidine kinase TERM 1521 1716157 - 1716172 + F 75 -9 -4.08485 | AGCATGCTCAAGCGT TACGCC GCGC GGCGTA TTTGATTTCGGTGGC TERM 1522 1716631 - 1716574 - g 77 -14.1 -3.33261 | opp_overlap 1716585, overlap 1716622 GCGCAACCCTGACAA GGTCAAGCAGTTGCTGTGCGAGAAGGT GCAC ACCATTTCGCGCAGCAACCGCCGGATC GGCAGCTATGCCAGA TERM 1523 1716673 - 1716648 - g 82 -14.7 -3.33492 | gap 1, overlap 1716649 GCAGCTATGCCAGAA CGGCGCCGGTCG CCG CG-CCAGCGCCG GCCAGCACCTTCGCC TERM 1524 1716682 - 1716649 - g 71 -13.7 -2.59881 | overlap 1716648 CAGCTATGCCAGAAC GGCGCCGGTCGCCGC GCCA GCGCCGGCCAGCACC TTCGCCAGCCAGGCG Pput_1530 1716224 - 1717336 + | chemotaxis-specific methylesterase TERM 1525 1717375 - 1717395 + G 72 -11.9 -3.33815 | CTGATCCTGGCTTTC GTTGCCATC GTC GGTGGCAAC TTCCTTGAAGGCGGT TERM 1526 1717870 - 1717890 + G 71 -8.9 -3.86194 | GACCCGTCGCAACTG GGCAATGGC ATT GCCGTGGCC TTTGTCGCCACCATT motC 1717336 - 1718076 + | flagellar motor protein Pput_1532 1718080 - 1718937 + | flagellar motor protein MotD TERM 1527 1719061 - 1719092 + F 80 -11.5 -3.76413 | overlap 1719053 CGCCGGTGTTCGCGG GCTTGCCCGCTCC CACAGA GGGGCGTGCGAGC TTTGAAGTTTTGCGC TERM 1528 1719211 - 1719191 - g 82 -6.1 -4.88407 | overlap 1719192 1719210 GTAGCCAATCAAAAA GGTGGTGTC GGC AAGACCACC ACTACCATTGCCCTG Pput_1533 1719161 - 1719949 + | cobyrinic acid a,c-diamide synthase Pput_1534 1719949 - 1720845 + | putative CheW protein TERM 1529 1720869 - 1720857 - f 70 -10.5 -3.25717 | opp_overlap 1720856 1720857, overlap 1720855 1720853 ATGACACAGAACATA CCGCC AAC GGCGG ATTTTGAGGGTAGGG Pput_1535 1720887 - 1721366 + | putative CheW protein Pput_1536 1721368 - 1721763 + | hypothetical protein TERM 1530 1721802 - 1721827 + T 95 -16.9 -3.56643 | opp_overlap 1721802 GCGTCGCCTGGGAAA TCGAGCGGCGC CCAT GCGTCGCTCGA TTTGAAAGGTGTCGC TERM 1531 1721827 - 1721802 - T 85 -14.7 -3.53012 | opp_overlap 1721802 GCGTCGCCTGGGAAA TCGAGCGGCGC CCAT GCGTCGCTCGA TTTGAAAGGTGTCGC Pput_1537 1724582 - 1721871 - | hypothetical protein TERM 1532 1723415 - 1723433 + g 79 -11 -3.87149 | GCAGGTTGAGCGTAT TGGTGAGG TAG CCTCGCCA TTTGGCTTTGGTAAC Pput_1538 1724988 - 1724650 - | flagellar protein FhlB-like protein Pput_1539 1726541 - 1724985 - | hypothetical protein TERM 1533 1726166 - 1726189 + g 80 -16.8 -2.62983 | opp_overlap 1726170, overlap 1726170 GGACCTTGCCTTGCA GCAAGGTGCC GACC GGCACCTTGC TGGTGTCCAGCTGGG Pput_1540 1726780 - 1727412 + | cytochrome c biogenesis protein CcmA Pput_1541 1727409 - 1728077 + | heme exporter protein CcmB TERM 1534 1728728 - 1728714 - g 89 -12.8 -4.18494 | opp_overlap 1728725 CACCCTTACCGAAAA GCCGGC GAT GCCGGC CGAAATGTGGCTGCC Pput_1542 1728124 - 1728891 + | heme exporter protein CcmC Pput_1543 1728888 - 1729064 + | Heme exporter protein D (CcmD) TERM 1535 1729491 - 1729479 - g 76 -10.5 -3.90291 | AGGCCCTGAAGGAAA GCGGC CAG GCCGC TGCCGGCGGAGAGAC Pput_1544 1729061 - 1729516 + | cytochrome c-type biogenesis protein CcmE TERM 1536 1730134 - 1730177 + G 74 -10.3 -3.7948 | gap 2, overlap 1730171 GGCCGGCTGGACGCT GCCTGGGCG-CGCTGGT-CGC GGCC GTGGACCATCGTCGCCTGGGC TTTCCTGGGTGTTGG TERM 1537 1731093 - 1731063 - g 78 -11.7 -3.71848 | GCTGTCCAGCAACAA CAGCGCCGAGCGC GACCT GCGCATGGCGCCG GGCGAAAGCGTGGAG Pput_1545 1729513 - 1731501 + | cytochrome c-type biogenesis protein CcmF Pput_1546 1731498 - 1732034 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Pput_1547 1732031 - 1732507 + | cytochrome C biogenesis protein TERM 1538 1732539 - 1732550 + G 80 -5.8 -4.77036 | GGCCTTCTGCTGCTC GCTG CCCT CAGC TTTTTGCTGCTCCCG TERM 1539 1732930 - 1732903 - g 79 -9.2 -4.20783 | gap 1, opp_overlap 1732927 1732929, overlap 1732906 AGTCGATGGAAGAAA TG-ACCACGCGCC TTG AACGCGTGGTGCA GGCCCAGCCGGATTC Pput_1548 1732500 - 1733696 + | TPR repeat-containing protein Pput_1549 1733709 - 1734125 + | hypothetical protein TERM 1540 1734120 - 1734136 + F 70 -5.1 -4.47049 | overlap 1734111 GGGCGCGCGTTCGCA CAGTAAC GCT GTTTCTG TTTCTGTTTCTGTTT Pput_1550 1734742 - 1734927 + | hypothetical protein Pput_1551 1734956 - 1735894 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_1552 1735946 - 1736734 + | PhzF family phenazine biosynthesis protein Pput_1553 1736802 - 1737209 + | glutathione-dependent formaldehyde-activating, GFA TERM 1541 1737224 - 1737260 + F 100 -21.1 -3.92641 | opp_overlap 1737215 ATTCAACGTCATGTT TGTCCGGAGGCATTC CGTGGGT GAATGCCTCCGGACA TTTCTGCGTGAACTT Pput_1554 1737244 - 1737675 + | peptidylprolyl isomerase, FKBP-type Pput_1555 1737910 - 1738572 + | hypothetical protein Pput_1556 1738617 - 1739810 + | D-amino-acid dehydrogenase TERM 1542 1739836 - 1739892 + T 79 -12.5 -3.53012 | opp_overlap 1739836 CTCTTCGCGGCTAAA GCCGCTCCTACAAGGACC-CCACGG TATTCAGGC TTGTGCTGGTCCT-GTAGGAGCGGC TTTAGCCGCGAAGAG TERM 1543 1739892 - 1739836 - T 75 -11.1 -3.53012 | opp_overlap 1739836 CTCTTCGCGGCTAAA GCCGCTCCTACAAGGACC-CCAC GGTATTCAGGCTT GTGCTGGTCCT-GTAGGAGCGGC TTTAGCCGCGAAGAG Pput_1557 1740657 - 1739929 - | Asp/Glu racemase Pput_1558 1742206 - 1740674 - | permease for cytosine/purine, uracil, thiamine, allantoin TERM 1544 1741861 - 1741878 + g 71 -5.5 -4.38154 | CAATGCGGCTGATGA CCGGG AACGGTAC CCCGG TTTTCTGGCCCATGT Pput_1559 1743140 - 1742703 - | AsnC family transcriptional regulator TERM 1545 1743651 - 1743630 - g 76 -9.5 -4.07568 | GTTTCTGGGCGAAAA GATCACCTT GGCC AAGGTGACC TGGCTGAGTGTGGCG Pput_1560 1743274 - 1744197 + | hypothetical protein Pput_1561 1744199 - 1745155 + | hypothetical protein TERM 1546 1745988 - 1746025 + F 77 -11.9 -3.28712 | AAGGTGACGGCCATG GCGATGCGCAGTAGCGC GTGG GCGAGGCTGCGCATCCC TTGTAGGAGCCGAGG TERM 1547 1746183 - 1746198 + F 71 -4.6 -4.62069 | overlap 1746184 GTGTTCGCCGAGCGG CTGGCG AGTC CGCCAA TTTTTCGGATGCGGG TERM 1548 1746329 - 1746340 + F 74 -3 -4.93696 | opp_overlap 1746329 TTGTGTGGGGATTAA TTGT TTTG ACAA TTTTTAATATTTGCA TERM 1549 1747808 - 1747786 - g 71 -11.2 -3.53012 | CCGCTGCCGCGCAAA TGCCCGCCCC GCT GGGGCAGGAA ATCGCTGTGAATGCG Pput_1563 1746447 - 1747958 + | major facilitator transporter TERM 1550 1747973 - 1748014 + F 79 -6.5 -4.84363 | overlap 1747974 1747977 ATTTAGTCAAATAAT GCTCGGCCCGGAACTGTTC AGTT GAATGGTTTCGGGTCTGGA TTTTTGCTGCTTTAA TERM 1551 1747974 - 1748013 + F 70 -10 -3.49533 | overlap 1747973 1747977 TTTAGTCAAATAATG CTCGGCCCGGAACTGTTC AGTT GAATGGTTTCGGGTCTGG ATTTTTGCTGCTTTA TERM 1552 1747977 - 1748010 + F 74 -12.5 -2.87003 | overlap 1747974 1747973 AGTCAAATAATGCTC GGCCCGGAACTGTTC AGTT GAATGGTTTCGGGTC TGGATTTTTGCTGCT Pput_1564 1748045 - 1748425 + | hypothetical protein TERM 1553 1748441 - 1748466 + T 79 -9.7 -4.09685 | opp_overlap 1748441 CAGGCGCATAAAAAA TCCGATGCTCG TTTC CAAGCGTCGGA TTTTGCGGCCTACAG TERM 1554 1748466 - 1748441 - T 100 -9.7 -5.252 | opp_overlap 1748441 CAGGCGCATAAAAAA TCCGATGCTCG TTTC CAAGCGTCGGA TTTTGCGGCCTACAG Pput_1565 1749539 - 1748541 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 1555 1749198 - 1749252 + g 79 -13.4 -3.48276 | opp_overlap 1749182, overlap 1749182 AGTGGCCGAGGTGAA CGGCGCGCTGTTGTTCGGCAGGCGGG TTA CCCAGTTGTCGGGCACCAGCTTGCCG TTGTCTGCCAGGGCG TERM 1556 1749384 - 1749414 + g 71 -11.1 -3.48684 | overlap 1749381 GACCTTCTCGTTGTG CTCGGCTTCCCAG TGCTT CTGGAAGGCCGGG TTGTAGTCCTTGTAG TERM 1557 1749669 - 1749717 + r 75 -11 -3.53012 | gap 2, opp_overlap 1749669 CTCTTCGCGGGTAAA CCCGCTCCTAC-G-GGGACCGCGC ACG GTCCGGGCCTGTTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_1566 1750570 - 1749749 - | Ion transport protein Pput_1567 1751488 - 1750616 - | Urea transporter TERM 1558 1750868 - 1750850 - G 70 -11.7 -3.24289 | overlap 1750845 1750843 1750853 ACCGTAAAGACCTAA CCAGGCG GCCTG CGCCTGG TCGGCGAGCAACGCC TERM 1559 1751655 - 1751600 - R 90 -16 -3.50447 | opp_overlap 1751600 CCAATCGCGACACAA GGCCGCTCCCACAGGATCGCATTCCC TTGT GCCAGCGTGGCCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 1560 1751600 - 1751655 + r 95 -18.2 -3.48276 | opp_overlap 1751600 CCAATCGCGACACAA GGCCGCTCCCACAGGATCGCATTCCC TTGT GCCAGCGTGGCCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 1561 1751685 - 1751669 - R 88 -15.1 -3.53012 | CCTTGTGTCGCGAAA GGGGCGC AAC GCGCCCC CGGCAATCTCAGATC Pput_1568 1753109 - 1751694 - | pyruvate kinase Pput_1569 1754380 - 1753106 - | hydroxypyruvate reductase TERM 1562 1754459 - 1754420 - R 100 -14.9 -4.93365 | opp_overlap 1754418 1754416 CTGCAGAATCAAAAA CGCCCCTGGAACTGCCT CCGTGC AGGCCGAACCAGGGGCG GGTGTTGCTCGATGC Pput_1570 1755514 - 1754621 - | 2-hydroxy-3-oxopropionate reductase TERM 1563 1755098 - 1755127 + g 76 -12.9 -3.53761 | gap 1 GAAGGCTTTCGGGCA GCCGCCGACCATGA TGC TCAGGGTCG-CGGC TTTGGCGCCGACTTC TERM 1564 1755268 - 1755278 + g 73 -8.2 -4.07568 | TCGGGCCCACGCCTT CGGC CAC GCCG TTTTCACCGAACAGG Pput_1571 1756449 - 1755667 - | hydroxypyruvate isomerase TERM 1565 1756495 - 1756471 - R 75 -12.8 -3.14132 | TCTCCTTGCGATGAA GGCCCCCAGG GCGTG CCTGGGGGCG TCAGGCGATCAGTCC Pput_1572 1758279 - 1756504 - | glyoxylate carboligase TERM 1566 1758752 - 1758781 + G 100 -5 -5.41746 | gap 1 CAAGGGGTCGCGCTT GCTGG-CGCTG GATGCGCAG CAGCGGCCGGC TTTTTTTGCCGCGTT Pput_1573 1758537 - 1758977 + | hypothetical protein Pput_1574 1759711 - 1759100 - | TetR family transcriptional regulator TERM 1567 1759948 - 1759935 - g 95 -2.3 -5.75342 | TGGCGGCAAAAAAAA CCGCA GGCG TGCTG GGTGATGACCTGGCG Pput_1575 1759844 - 1760758 + | hypothetical protein TERM 1568 1760797 - 1760855 + T 70 -9.5 -3.53444 | gap 1 CGGTTCGCGGGTGAA CCCGCTCCTACCAGGTACCGCGTTTG CCTTGAAC CCGGCGC-GTCCCCTGTAGGAGCGGG TTTACCCGCGAATGG Pput_1576 1761680 - 1760898 - | nucleoside-binding outer membrane protein-like protein TERM 1569 1761715 - 1761731 + r 93 -5.8 -5.63645 | gap 1 ATTGATCTGTTGTCA GCGCTCG TTGT CG-GCGC TTTTTTGTCTTTTGA Pput_1577 1762818 - 1762033 - | nucleoside-binding outer membrane protein-like protein TERM 1570 1762931 - 1762951 + r 100 -14 -4.20084 | opp_overlap 1762928 1762931 TGCAGAGGTAAATGA GGGGCGGT CATGC ACCGCCCC TTTTGGCTCAATGCT TERM 1571 1762951 - 1762931 - R 80 -14 -2.95942 | opp_overlap 1762931, overlap 1762928 TGCAGAGGTAAATGA GGGGCGGT CATGC ACCGCCCC TTTTGGCTCAATGCT Pput_1578 1764314 - 1762959 - | uracil-xanthine permease TERM 1572 1763973 - 1763928 - G 82 -14.7 -3.26319 | gap 1, overlap 1763952 1763953 AACCTTGGACATGAA CGGCGCGATCAGCA-TGCCGAA GAA CCCGGCAGCGATGGTCGCGCCG AAGATCCCCTGCAGG Pput_1579 1765872 - 1764544 - | hypothetical protein Pput_1580 1766420 - 1765917 - | ureidoglycolate hydrolase Pput_1581 1766985 - 1766470 - | hypothetical protein Pput_1582 1767911 - 1766985 - | chitin deacetylase Pput_1583 1768311 - 1768664 + | hydroxyisourate hydrolase TERM 1573 1768698 - 1768719 + T 93 -6.5 -5.59357 | TTCGTAGGTCCTTTG GCCCGCT CTCACACT GGCGGGC TTTTTTTCGTCTGCT TERM 1574 1768907 - 1768933 + T 70 -10.1 -3.53444 | gap 1, overlap 1768908 1768912 GGAGCGACCTTGCTC GCGATGCGCCGC GCGT GCGGCGC-TCGA TTTCGAAAACACTGG TERM 1575 1768908 - 1768932 + T 75 -13.6 -2.71924 | gap 1, overlap 1768907 1768912 GAGCGACCTTGCTCG CGATGCGCCGC GCGT GCGGCGC-TCG ATTTCGAAAACACTG TERM 1576 1768912 - 1768929 + T 78 -14.1 -2.64155 | overlap 1768908 1768907 GACCTTGCTCGCGAT GCGCCGC GCGT GCGGCGC TCGATTTCGAAAACA Pput_1584 1770322 - 1768973 - | xanthine/uracil/vitamin C permease TERM 1577 1769964 - 1769938 - G 74 -12.2 -3.49169 | overlap 1769936 GGAACATGAACAACA CGCCGGAGACGA ATA CCGCCCCCAGCG CCGTTTCCCAGTTGT TERM 1578 1770287 - 1770250 - G 79 -9.2 -4.11216 | gap 3, overlap 1770251 GCTTGAGTTTGAAAA TC-CGCTCCAGCCAGCTCG TTT CGAGC-GGCGGG-GCGAGA TCCAGCGTAGGGGCT TERM 1579 1770401 - 1770415 + H 75 -2.1 -5.11063 | gap 1, opp_overlap 1770401, overlap 1770401 GGCTCCGCGAGGGAA GG-CAG ACGT CTGACC TTTTTGTTGACTCAT TERM 1580 1770653 - 1770636 - g 81 -4.1 -5.03145 | gap 1 CAACCTCTGAAAAAA CCTGCACG AGT CG-GCAAG GCCGGCCGCAGCGGT Pput_1585 1770570 - 1771361 + | GntR family transcriptional regulator TERM 1581 1771538 - 1771558 + G 74 -12.6 -3.3854 | opp_overlap 1771536 CTCGGTAAACGCATG GGTGCCGA ACTGA TCGGCACC TTCTGGCTGGTCCTT TERM 1582 1772068 - 1772098 + G 74 -10.2 -3.73647 | opp_overlap 1772064 1772062 GGTGACCAATACCTC GGTCAACCCCGCGC GTA GCACGGGGCCGGCC TTGTTCGTCGGTGGC Pput_1586 1771511 - 1772209 + | aquaporin Z Pput_1587 1773510 - 1772206 - | guanine deaminase Pput_1588 1774366 - 1773521 - | xanthine dehydrogenase accessory protein XdhC TERM 1583 1774477 - 1774493 + r 82 -13.7 -3.53012 | CAACATACATATTTG GGGCTGC TGC GCAGCCC TTTCGCGACACAAGG Pput_1589 1776938 - 1774539 - | xanthine dehydrogenase, molybdopterin binding subunit TERM 1584 1776148 - 1776175 + g 76 -9.8 -3.90112 | gap 1 CGCGCGACCACCGCG CACAGGCACGCCG GGC TGGCG-GCCTGGG TTTCCTTGCCGCCAA Pput_1590 1778385 - 1776931 - | xanthine dehydrogenase, small subunit Pput_1591 1778654 - 1779313 + | GntR family transcriptional regulator TERM 1585 1781029 - 1781068 + G 76 -13.4 -3.14463 | GGGTGAGCTGCGTTT GCTGCTGGCCGTCGGCGC GGGG GCGACGTTGCCCGGCAGC TTGCTGGAGAAGGTT Pput_1592 1779317 - 1782805 + | chromosome segregation protein SMC zipA 1783011 - 1783904 + | cell division protein ZipA TERM 1586 1784044 - 1783989 - f 100 -22 -3.53012 | gap 1, opp_overlap 1783989 CTCTTCGCGGGTAAA CCCGCTCCTACAGGTACATCAC-CGCC CTA GGCATGTGACGCCCTTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 1587 1783989 - 1784044 + F 95 -17.6 -3.53012 | gap 1, opp_overlap 1783989 CTCTTCGCGGGTAAA CCCGCTCCTACAGGTACATCAC-CGCC CTA GGCATGTGACGCCCTTGTAGGAGCGGG TTTACCCGCGAAGAG ligA 1784140 - 1786470 + | NAD-dependent DNA ligase LigA Pput_1595 1787240 - 1786821 - | MerR family transcriptional regulator Pput_1596 1787324 - 1787812 + | hypothetical protein Pput_1597 1788698 - 1788973 + | hypothetical protein Pput_1598 1789989 - 1789183 - | extracellular solute-binding protein Pput_1599 1790111 - 1792189 + | DNA polymerase III subunits gamma and tau TERM 1588 1792225 - 1792200 - f 74 -12.6 -2.86806 | gap 1, overlap 1792197 AGTAACGGATAACCA TGCGGC-CGGC CCGGT GCCGGGCCGCA TCACATGACCCAATC TERM 1589 1792323 - 1792311 - g 82 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GAAGA TGCA GGAAGAACTGGCCAA Pput_1600 1792253 - 1792588 + | hypothetical protein TERM 1590 1792609 - 1792628 + F 100 -15 -6.11644 | opp_overlap 1792609 TGAGGTACTCAAAAA CGCCGCTG TTAT CAGCGGCG TTTTTTTTTGCGTAG TERM 1591 1792628 - 1792609 - f 100 -15 -4.67353 | opp_overlap 1792609 TGAGGTACTCAAAAA CGCCGCTG TTAT CAGCGGCG TTTTTTTTTGCGTAG TERM 1592 1792746 - 1792762 + F 82 -13.7 -3.53012 | opp_overlap 1792740, overlap 1792711 CAGCATAGAGTGCCG GGGCTGC TTA GCAGCCC TTTCGCGACACAAGG recR 1792884 - 1793486 + | recombination protein RecR TERM 1593 1793524 - 1793563 + T 88 -15.2 -3.53444 | opp_overlap 1793524 1793542 CCATTCGCGGGTAAA CCCGCGCCTACAAA AAATGCGCGGCC TTTGTAGGCGCGGG TTTACCCGCGAATGG TERM 1594 1793563 - 1793524 - T 93 -16.6 -3.53444 | opp_overlap 1793524, overlap 1793542 CCATTCGCGGGTAAA CCCGCGCCTACAAAAA ATGCGCGG CCTTTGTAGGCGCGGG TTTACCCGCGAATGG Pput_1602 1794153 - 1793605 - | adenine phosphoribosyltransferase Pput_1603 1794943 - 1794209 - | CRP/FNR family transcriptional regulator TERM 1595 1795039 - 1795069 + r 77 -11 -3.56541 | opp_overlap 1795043 1795044, overlap 1795043 ATGGTGCGCGCTGGC GAAACCCCGGCAGG TGG CCTGCCGGGAGTCC TTGTGTGCTCATAGT TERM 1596 1795065 - 1795043 - R 95 -17 -3.53012 | opp_overlap 1795043 1795039, overlap 1795044 TGCGCGCTGGCGAAA CCCCGGCAGG TGG CCTGCCGGGA GTCCTTGTGTGCTCA TERM 1597 1795043 - 1795066 + r 80 -14.6 -2.90888 | gap 1, opp_overlap 1795043 1795044, overlap 1795039 TGCGCGCTGGCGAAA C-CCCGGCAGG TGG CCTGCCGGGAG TCCTTGTGTGCTCAT TERM 1598 1795064 - 1795044 - R 86 -18.3 -2.71712 | opp_overlap 1795043 1795039, overlap 1795043 GCGCGCTGGCGAAAC CCCGGCAGG TGG CCTGCCGGG AGTCCTTGTGTGCTC Pput_1604 1796512 - 1795130 - | coproporphyrinogen III oxidase Pput_1605 1797214 - 1796618 - | hypothetical protein Pput_1606 1797509 - 1797294 - | cytochrome oxidase maturation protein, cbb3-type Pput_1607 1799962 - 1797488 - | heavy metal translocating P-type ATPase TERM 1599 1798147 - 1798106 - G 87 -18.7 -2.72463 | ATCCAGGCCGAACCA GGCCAGTGGCCCCTGGCGG TCGC CCAGCAGCAGCCACTGGCC GCGCGGCTCGGGTAC TERM 1600 1798699 - 1798711 + g 80 -6.2 -4.70659 | overlap 1798684 CGCGATCGGCGATTT CCGC CAGGC GCGG TTTTTCGGTCTGGGC Pput_1608 1800629 - 1800099 - | hypothetical protein Pput_1609 1802063 - 1800645 - | cytochrome c oxidase cbb3 type, accessory protein FixG TERM 1601 1801646 - 1801662 + g 83 -12.3 -4.07885 | TCATGCGCTGGTTGC GGTCACC CTC GGTGACC TTTTCGCACCACATG TERM 1602 1802329 - 1802297 - R 95 -17.2 -3.53012 | gap 1, opp_overlap 1802297 CTCTTCGCGGGTAAA CCCGCTCCTACA-AG GATC CTGTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 1603 1802297 - 1802329 + r 100 -18.5 -3.53012 | opp_overlap 1802297 CTCTTCGCGGGTAAA CCCGCTCCTACAAGG ATC CTGTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_1610 1803334 - 1802357 - | cytochrome c oxidase, cbb3-type, subunit III TERM 1604 1802544 - 1802566 + g 74 -10.5 -3.75153 | GGGTGGGTCAGGTTC GGTGCGCCC ATGGC GGGCGTGCC TTTGCCTTCCGGCCC Pput_1611 1803522 - 1803331 - | Cbb3-type cytochrome oxidase component Pput_1612 1804136 - 1803528 - | cytochrome c oxidase, cbb3-type, subunit II Pput_1613 1805578 - 1804136 - | cytochrome c oxidase, cbb3-type, subunit I Pput_1614 1805855 - 1805580 - | hypothetical protein TERM 1605 1806106 - 1806081 - R 100 -20.5 -2.87132 | opp_overlap 1806065 GTGGTGGGGCAGAGA TCGAGCGCCGC CCGC GCGGCGCTCGA TCTCACAGGCGGCAA Pput_1615 1807106 - 1806165 - | cytochrome c oxidase, cbb3-type, subunit III TERM 1606 1806358 - 1806380 + g 81 -12.7 -3.75153 | GGGTGGGTCAGGTTC GGTGCGCCC ATGGC GGGCGTACC TTTGCCTTCCGGCCC Pput_1616 1807297 - 1807103 - | cytochrome c oxidase, cbb3-type, CcoQ subunit Pput_1617 1807911 - 1807303 - | cytochrome c oxidase, cbb3-type, subunit II Pput_1618 1809349 - 1807925 - | cytochrome c oxidase, cbb3-type, subunit I Pput_1619 1809400 - 1810092 + | hypothetical protein Pput_1620 1810491 - 1810207 - | hypothetical protein Pput_1621 1811117 - 1810566 - | exonuclease, RNase T and DNA polymerase III Pput_1622 1811289 - 1812089 + | extracellular solute-binding protein Pput_1623 1812660 - 1812130 - | extracytoplasmic-function sigma-70 factor PvdS TERM 1607 1815803 - 1815835 + G 76 -7.6 -4.258 | gap 1 CGTGCCCAACGCCAA CCGCCCGCGCC-TGG AAAC CCAAGGCATGGTCGG TTTCTTCATCAATAC TERM 1608 1820099 - 1820123 + G 70 -10 -3.54475 | gap 1 CAACTTCGACGCTGC CAGCGAGCGCC TGTG GGTGC-CGCTG TTGTGTGGTGCGCGC TERM 1609 1821624 - 1821668 + G 74 -10.6 -3.72324 | opp_overlap 1821617, overlap 1821593 1821619 CTGCAACAGGGGCCG CTGCTGCGCGCCTTGCTGGT GCGTG ACGGGCAGGGCACCCAGCGG TTGTTGCTGGCGATC TERM 1610 1822838 - 1822862 + G 84 -17.1 -2.73364 | CTGGCAGGCCGTGGT GGCGCGCCACG AAG CGTTGCGCGCC TCGTTCAGCTGGAAC TERM 1611 1823321 - 1823359 + G 78 -11.7 -3.79113 | gap 1, overlap 1823322 GAGCGACCGCCCGCT GCGCC-ATGACCACGCCG GTAG CGGCATGGTCGTCGGCGA TTGTTATGCCCGCCT TERM 1612 1823322 - 1823358 + G 79 -15.2 -2.87146 | gap 1, overlap 1823321 AGCGACCGCCCGCTG CGCC-ATGACCACGCCG GTAG CGGCATGGTCGTCGGCG ATTGTTATGCCCGCC Pput_1624 1812969 - 1825922 + | peptide synthase Pput_1625 1826423 - 1825965 - | ABC-type multidrug transport system ATPase component-like protein TERM 1613 1826123 - 1826149 + g 80 -4.9 -4.82901 | opp_overlap 1826120, overlap 1826126 AATGAGAAGCTATCA GCACGCTCGCG CCTTC CGCGCACGCGC TTTTTATACCGAGCC TERM 1614 1826259 - 1826291 + g 100 -5.5 -5.45652 | opp_overlap 1826237 1826259 GGTCAGCGTGAAGTA GCTGCGAATTTCACC GTA GCTGCAATTGGCGGC TTTTTTCTTGGCGAT Pput_1626 1827404 - 1826667 - | hypothetical protein dsbG 1828990 - 1828232 - | disulfide isomerase/thiol-disulfide oxidase TERM 1615 1828424 - 1828436 + g 71 -6.2 -4.35461 | overlap 1828422 CGCCTTCAGGGTACT GGCC TTGCC GGCC TTTTCATGCTGTTGC Pput_1628 1829828 - 1828992 - | redoxin domain-containing protein Pput_1629 1831543 - 1829828 - | protein-disulfide reductase TERM 1616 1829895 - 1829908 + g 71 -9.5 -3.68222 | ACCTCACCGGTGATG CGCCG CGCG CGGCG TTCTTCACCTTCCGG TERM 1617 1831056 - 1831113 + g 74 -14.9 -2.56596 | gap 2, opp_overlap 1831055 1831056, overlap 1831056 1831070 1831091 CCAAGGCCGAAGAAC GCCAGCAGGCTCCAGGCCAGGTGGCCT TGTTGC AGGCCGC-TGGCCAGG-GCCTGGTCGC TGGCTTGCTCGGCGG TERM 1618 1832189 - 1832171 - H 83 -7.4 -4.81843 | AAGAATCAAAAGAAA GGGCAG GCCCCAA CTGCCC AGAGGATCAAGCATG TERM 1619 1832440 - 1832490 + G 93 -18.3 -3.27259 | gap 2, opp_overlap 1832437 1832435 GCGCCAAGGACATGC CCG-GGTGGCC-CGCGCAGCAGGGC CAT GCGCTGCTGCTCAAGGCCACCACGG TTGATCGTATCTATG Pput_1630 1832202 - 1835033 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Pput_1631 1835026 - 1835562 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pput_1632 1835565 - 1836776 + | gluconate 2-dehydrogenase acceptor subunit TERM 1620 1837272 - 1837298 + G 81 -15.8 -3.03124 | overlap 1837256 CGCTTGCGTGTCGGC GCCGCCCAGCGG CTG CTGCTGGCCGGC TATTCCAGCGTGGCG Pput_1633 1836780 - 1837751 + | hypothetical protein TERM 1621 1837795 - 1837812 + G 71 -12.7 -3.10164 | CAGCAGTGTGCGTTT CGGCGCT GACA AGCGCCG TTCGCTGCTGGCTGA Pput_1634 1837748 - 1838314 + | MobA-like protein Pput_1635 1838957 - 1838331 - | GAD-like protein Pput_1636 1839597 - 1838980 - | GAD-like protein TERM 1622 1839159 - 1839183 + g 77 -2.1 -4.96435 | overlap 1839165 TTTTCTTCGCGGGCT CAAAAAGGCTT TCA AAGTCGTTGTG TTCTTTTTTTCTTGA Pput_1637 1840962 - 1839616 - | hypothetical protein TERM 1623 1839656 - 1839672 + g 72 -4.3 -4.57073 | overlap 1839657 1839658 ATGTAAGTCGAGTGG GTGCCGA ATT TCGGCGA TTTTTCCGCAGCCTC Pput_1638 1841221 - 1841904 + | two component transcriptional regulator Pput_1639 1841901 - 1843223 + | integral membrane sensor signal transduction histidine kinase TERM 1624 1843318 - 1843365 + F 93 -18.5 -2.81187 | overlap 1843324 GCTGGCCTCTTCGCG GGTGAACCCGCTCCTACGGGC GGTGCG GTCTGTGGGGGCGGGTTTGCC TGTGCTGGCCTCTTT TERM 1625 1843324 - 1843359 + F 91 -14.7 -3.727 | overlap 1843318 CTCTTCGCGGGTGAA CCCGCTCCTACGGGC GGTGCG GTCTGTGGGGGCGGG TTTGCCTGTGCTGGC TERM 1626 1843866 - 1843878 + G 71 -9.1 -3.72695 | opp_overlap 1843850 1843865, overlap 1843867 TCGACCTGACCACAC CGGTC AAG GACCG TTTCGTCCAGGACCT TERM 1627 1844253 - 1844232 - g 77 -12.9 -3.57144 | TGCTCGATCCGGAAA GCGGCGTGC CGCT GCCCGCCGC CGTGATCCTCGAAGT Pput_1640 1843550 - 1844941 + | diaminobutyrate--2-oxoglutarate aminotransferase Pput_1641 1846137 - 1845016 - | transcription factor jumonji TERM 1628 1845855 - 1845887 + g 76 -8.4 -4.17762 | gap 1, opp_overlap 1845852, overlap 1845856 CGCTGCTGATAACCT GCGGCAGCA-GGGTC GCCA GGCCCATGTTGCCGG TTATTTTCAGGCGTC Pput_1642 1847491 - 1846202 - | aminotransferase, class V TERM 1629 1847439 - 1847463 + g 76 -9.1 -4.09739 | overlap 1847440 TCGCTGGCGAGGGGC AGGCCGGCGGC GAG GATGCCGGCCC TTTTGAGAAAATTGC TERM 1630 1847440 - 1847462 + g 71 -12.6 -3.05522 | overlap 1847439 CGCTGGCGAGGGGCA GGCCGGCGGC GAG GATGCCGGCC CTTTTGAGAAAATTG Pput_1643 1848926 - 1847508 - | peptidase M19, renal dipeptidase Pput_1644 1849037 - 1850662 + | hypothetical protein Pput_1645 1850784 - 1851260 + | RNA polymerase sigma factor Pput_1646 1851429 - 1851908 + | hypothetical protein Pput_1647 1851981 - 1853306 + | major facilitator transporter TERM 1631 1853378 - 1853394 + F 71 -8.1 -3.96148 | opp_overlap 1853378 1853377 ACCTATTAGCCAAAT TTAACCT GGA AGGTTAA TTTCTCATGGAAAAG Pput_1648 1853401 - 1853697 + | hypothetical protein Pput_1649 1853700 - 1854101 + | helix-turn-helix domain-containing protein TERM 1632 1854161 - 1854105 - T 100 -26.2 -3.29511 | gap 1, opp_overlap 1854121, overlap 1854121 CGTACTGCCTGATAA TGGCAGCCAACAAAAAGCCCCCGGCTC ATGA GAACCGGGGGCTTTTTGTTG-CCGCAA GGGCAGGGGCCTTAC TERM 1633 1854121 - 1854146 + T 100 -16.1 -5.06414 | opp_overlap 1854121 1854105 GGCAGCCAACAAAAA GCCCCCGGCTC ATGA GAACCGGGGGC TTTTTGTTGCCGCAA TERM 1634 1854146 - 1854121 - T 100 -18.3 -5.10461 | opp_overlap 1854121, overlap 1854105 GGCAGCCAACAAAAA GCCCCCGGCTC ATGA GAACCGGGGGC TTTTTGTTGCCGCAA Pput_1650 1855855 - 1854173 - | electron-transferring-flavoprotein dehydrogenase TERM 1635 1856557 - 1856547 - g 74 -2.4 -4.8622 | opp_overlap 1856554 1856554 CGCCTGAAGGAAAAA GGCG TTG CGAC CGAGATCGTCGTCGT TERM 1636 1856796 - 1856762 - g 76 -12.8 -3.39803 | opp_overlap 1856764, overlap 1856765 CATCGACAGTGACAA CAACCAGACCGGCCAG ATG CTGGCCGCGCTGACTG GCTTCGCCCAGGGCA TERM 1637 1856793 - 1856765 - g 79 -10.9 -3.83568 | opp_overlap 1856764, overlap 1856762 CGACAGTGACAACAA CCAGACCGGCCAG ATG CTGGCCGCGCTGA CTGGCTTCGCCCAGG Pput_1651 1856391 - 1857140 + | electron transfer flavoprotein, alpha/beta-subunit-like protein Pput_1652 1857141 - 1858070 + | electron transfer flavoprotein, alpha subunit-like protein TERM 1638 1858119 - 1858095 - f 91 -12.8 -4.09117 | opp_overlap 1858095 TTCACTTATAAAGAA CCCGGCCCTC GTTTT GAGGGTCGGG TTTTTTTATGGCTTG TERM 1639 1858095 - 1858119 + F 100 -15.7 -5.66684 | opp_overlap 1858095 TTCACTTATAAAGAA CCCGGCCCTCG TTT TGAGGGTCGGG TTTTTTTATGGCTTG Pput_1653 1858146 - 1858967 + | amino acid ABC transporter periplasmic protein Pput_1654 1858977 - 1859330 + | hypothetical protein Pput_1655 1859327 - 1860139 + | OmpA/MotB domain-containing protein TERM 1640 1860170 - 1860152 - f 95 -17.4 -3.53444 | opp_overlap 1860152 TGAGTCTTGTCGAAA CGGGCCGC TTT GCGGCCCG TTTTATGTCGGTTTA TERM 1641 1860152 - 1860170 + F 100 -17.4 -4.59081 | opp_overlap 1860152 TGAGTCTTGTCGAAA CGGGCCGC TTT GCGGCCCG TTTTATGTCGGTTTA Pput_1656 1860224 - 1861753 + | GntR family transcriptional regulator Pput_1657 1861818 - 1862252 + | hypothetical protein TERM 1642 1862330 - 1862345 + F 71 -4.6 -4.63218 | overlap 1862331 GAGCGGTTACTATCC AGGGAC GTTC GTCCCG TTTTGTTCCAGGGAG Pput_1658 1862382 - 1862636 + | hypothetical protein Pput_1659 1862667 - 1863275 + | lipid-binding START domain-containing protein TERM 1643 1863348 - 1863365 + T 85 -12.7 -3.73336 | opp_overlap 1863348 AGGACAAATAAAAAA GGCTGCC CGAG GGCAGCC TTCTTGCGTTCGGCT TERM 1644 1863365 - 1863348 - T 100 -12.7 -5.73978 | opp_overlap 1863348 AGGACAAATAAAAAA GGCTGCC CGAG GGCAGCC TTCTTGCGTTCGGCT gltA 1864678 - 1863389 - | type II citrate synthase TERM 1645 1864786 - 1864803 + H 76 -7 -4.58283 | TAAAGGCTTGTTGAA TCAGGC ATTCAA GCCTGA TTTTTCCCGAAATTC Pput_1661 1865031 - 1865417 + | succinate dehydrogenase, cytochrome b556 subunit Pput_1662 1865411 - 1865779 + | succinate dehydrogenase, hydrophobic membrane anchor protein sdhA 1865783 - 1867555 + | succinate dehydrogenase flavoprotein subunit sdhB 1867567 - 1868271 + | succinate dehydrogenase iron-sulfur subunit TERM 1646 1869206 - 1869180 - g 82 -10.8 -4.08216 | overlap 1869198 TGAGGGCCTGGAAAA GTACCTGGGCAC CAA GTACCCGGGCAC CAAGCGTTTCGGCCT TERM 1647 1871196 - 1871166 - g 70 -11.8 -3.13403 | overlap 1871175 CTGGTGTCAGGAAGA GCCGATGAACCAGG GTG CCTGGTACAGCAGC CAGCACCACATGCGC kgd 1868518 - 1871349 + | alpha-ketoglutarate decarboxylase Pput_1666 1871392 - 1872615 + | dihydrolipoamide acetyltransferase TERM 1648 1872623 - 1872678 + F 100 -19.1 -3.45321 | gap 2, opp_overlap 1872657 1872661, overlap 1872657 1872659 ACATCTAACCCTCTG GCTGCGTACCGTGCCGGGCCTGGCTTC GCGA GAAGCCATGCC-G-CGCGGTTCGCGGC TTGTAGCTTGTAGCT Pput_1667 1872709 - 1874145 + | dihydrolipoamide dehydrogenase TERM 1649 1874178 - 1874156 - f 91 -11.2 -4.3953 | opp_overlap 1874156, overlap 1874157 1874159 GTTAATTATAAGAAA CCACGGCGGG CTG CCCGTCGTGA GTCTTGCGTGCATGA TERM 1650 1874156 - 1874179 + F 71 -11 -3.09878 | gap 1, opp_overlap 1874156 1874157 1874159 GTTAATTATAAGAAA C-CACGGCGGG CTG CCCGTCGTGAG TCTTGCGTGCATGAC TERM 1651 1874215 - 1874157 - f 83 -14.5 -3.22995 | gap 1, opp_overlap 1874156, overlap 1874156 1874159 1874207 1874208 TTAATTATAAGAAAC CACGGCGGGCTGCCCGTCGTGAGTCTTG CGTG CATGACTCACCGCGGAAAGTCCGCCG-G ACCGGATCACACGGG TERM 1652 1874214 - 1874159 - f 90 -18.2 -3.16682 | opp_overlap 1874156, overlap 1874156 1874157 1874207 1874208 AATTATAAGAAACCA CGGCGGGCTGCCCGTCGTGAGTCTTG CGTG CATGACTCACCGCGGAAAGTCCGCCG GACCGGATCACACGG sucC 1874317 - 1875483 + | succinyl-CoA synthetase subunit beta Pput_1669 1875483 - 1876367 + | succinyl-CoA synthetase subunit alpha TERM 1653 1876378 - 1876428 + F 95 -19.1 -3.14211 | gap 1, opp_overlap 1876395, overlap 1876395 AGTAATACTGCTACA CCCCCCACGCGCACAGAGGCCACC TTCG GGTGGCCTTTGT-CGTATGTGGGG TTCGTAGGAGCGGGT TERM 1654 1876395 - 1876412 + F 91 -12.7 -4.04318 | opp_overlap 1876395, overlap 1876378 CCCCACGCGCACAGA GGCCACC TTCG GGTGGCC TTTGTCGTATGTGGG TERM 1655 1876412 - 1876395 - f 74 -12.7 -2.88544 | opp_overlap 1876378 1876395 CCCCACGCGCACAGA GGCCACC TTCG GGTGGCC TTTGTCGTATGTGGG Pput_1670 1876771 - 1878084 + | branched-chain amino acid transport system II carrier protein TERM 1656 1878158 - 1878183 + F 100 -12.5 -4.93696 | opp_overlap 1878156 1878154 1878151 1878158 GGTGAAAACAAGAGA GCCCCGTCTCC GAAA GGATGCGGGGC TTTTTGCTGTTTGCC TERM 1657 1878183 - 1878158 - f 72 -10.3 -3.41798 | opp_overlap 1878158, overlap 1878156 1878154 1878151 GGTGAAAACAAGAGA GCCCCGTCTCC GAAA GGATGCGGGGC TTTTTGCTGTTTGCC Pput_1671 1878320 - 1879069 + | hypothetical protein Pput_1672 1879639 - 1879097 - | hypothetical protein Pput_1673 1880832 - 1879636 - | peptidase TERM 1658 1887009 - 1886993 - g 73 -3.5 -4.71382 | overlap 1886994 1886995 ATAACCAGGTAAAAA TCCGCGG CTT CCGCGTC GAGCTGGGCGAAATC TERM 1659 1887919 - 1887949 + G 70 -11.9 -3.20941 | gap 1, overlap 1887917 1887922 1887926 1887927 1887929 CTGCGTGCCTTGCTG GCAA-CGCTGGCGG ACGG CAGCCAGCGGTTGC TGTTGGTCGTTCATC TERM 1660 1892122 - 1892175 + G 70 -10.3 -3.63694 | gap 3, opp_overlap 1892123, overlap 1892123 1892165 GCCGCTCAGCAGCAG ATCGACCAGGGCCCGGTCAGC-GGTG AGCTG CACCTGCTG-CCG-GCCCAGGCCGAA TTCTTCGCGCTGGCT TERM 1661 1892123 - 1892174 + G 72 -13.8 -2.77895 | gap 3, opp_overlap 1892123, overlap 1892122 1892165 CCGCTCAGCAGCAGA TCGACCAGGGCCCGGTCAGC-GGTG AGCTG CACCTGCTG-CCG-GCCCAGGCCGA ATTCTTCGCGCTGGC TERM 1662 1892174 - 1892123 - g 81 -16 -2.82516 | gap 3, opp_overlap 1892122 1892123 1892165 CCGCTCAGCAGCAGA TCGACCAGGGCCCGGTCAGC-GGTG AGCTG CACCTGCTG-CCG-GCCCAGGCCGA ATTCTTCGCGCTGGC TERM 1663 1895712 - 1895672 - g 83 -17.5 -2.60244 | overlap 1895668 CGTTCAAGCAACTGA TGGCGGTGGCCACCACGGC TGA GCCGCAGCGGCCACTGGCA TTGCGCAGCGTGGTG Pput_1674 1881082 - 1896774 + | amino acid adenylation domain-containing protein TERM 1664 1897005 - 1897048 + G 75 -11.6 -3.6608 | gap 1 AACATCGGGGTCAGC CTGCGCCTGCATGGCCCGCTG AAC CTGCAGGCCTTGCAAG-GCAG TTTCGATGCGCTGCT TERM 1665 1899404 - 1899429 + G 71 -11.1 -3.53012 | overlap 1899405 GCGTTTCGTCCCCGA CCCGTTCGCCG GGAA CGGTGAACGGC TTTACCGCACCGGCG TERM 1666 1899405 - 1899428 + G 75 -14.6 -2.71712 | overlap 1899404 CGTTTCGTCCCCGAC CCGTTCGCCG GGAA CGGTGAACGG CTTTACCGCACCGGC Pput_1675 1896774 - 1900163 + | amino acid adenylation domain-containing protein TERM 1667 1902753 - 1902778 + G 71 -9.7 -3.72576 | gap 1, overlap 1902719 GCGCGTGGTTACCAT CG-TCGCCCGTC GCT GACGGCCGAGCG TTTCGTGCCCGACCC TERM 1668 1906066 - 1906035 - g 73 -11.5 -3.59979 | TCGCTGCAGTTGAAA GCCGATCGGGCAC GGTTCA GTGCCCGGTTGGC CGAGCAGCTTGGCGA TERM 1669 1907195 - 1907145 - g 73 -13.3 -3.14211 | gap 1, opp_overlap 1907144 ACCTGTGTCGACGAA GGGCGTG-ACAGCGTGCCGATCGG CCAG CCGATCGCCAACCTGTACACGCAC ATCCTTGGCCCGGCG TERM 1670 1907283 - 1907308 + G 71 -9.7 -3.72576 | gap 1, overlap 1907249 GCGCGTGGTTACCAT CG-TCGCCCGTC GCT GACGGCCGAGCG TTTCGTACCCGACCC TERM 1671 1907756 - 1907726 - g 74 -12.5 -3.33261 | GCCCAAGCCCGACAA CAGCGCCCTGCAG CAGGC CTACCGGGCGCCG CAAACCCCGCTCGAG TERM 1672 1908057 - 1908027 - g 82 -6.1 -4.87665 | opp_overlap 1908029 1908033 1908040 GCCCATGGAGAAAAA GCCACCGCACC GTTGTCGTT GATGCAGCGGC GCTTGTGGGTTGCCG TERM 1673 1909905 - 1909883 - g 85 -9.8 -4.2828 | overlap 1909884 CCTGATGTACGAAAA GCTGCCGCAG GCA CTGCGGCAAA CCCTCGAGGACAAAG TERM 1674 1909904 - 1909884 - g 73 -13.3 -3.16647 | overlap 1909883 CTGATGTACGAAAAG CTGCCGCAG GCA CTGCGGCAA ACCCTCGAGGACAAA Pput_1676 1900176 - 1910474 + | amino acid adenylation domain-containing protein TERM 1675 1911202 - 1911250 + G 73 -13.2 -3.14463 | GCAACGCCTGGCCGA CGCCCGTCAGGCCAGCCTGGA-CA CGC TGCTGCAGGC-GGCCTGGTGGGCC TTGCTGGGCCGGCTT TERM 1676 1913649 - 1913621 - g 81 -3.7 -5.06816 | overlap 1913640 AGCCCTGAAGAAAAA GCCCGGCTGCT GGAAAAG AGCCGCTGAGC CTCACCACGCCCAGG Pput_1677 1910471 - 1913647 + | amino acid adenylation domain-containing protein TERM 1677 1913654 - 1913689 + F 95 -15.4 -3.76952 | gap 1, opp_overlap 1913640, overlap 1913658 AGCCGCTGAGCCTCA CCACGCCCAGGGGCGGG CAA CCCGCCCCTGGG-GTCA TTTGCATTGCCTCCC TERM 1678 1913658 - 1913686 + F 100 -21.7 -2.97588 | opp_overlap 1913640, overlap 1913654 GCTGAGCCTCACCAC GCCCAGGGGCGGG CAA CCCGCCCCTGGGG TCATTTGCATTGCCT TERM 1679 1914136 - 1914180 + G 72 -12 -3.25823 | ATCGCTGCCCAGTCG CTGCCCAACGCCCTGCGTGC GCTTG GCGAGCAGGCCGATGTGCAG TTCATCTACAACGCC Pput_1678 1913956 - 1916448 + | TonB-dependent siderophore receptor Pput_1679 1917384 - 1916506 - | hypothetical protein TERM 1680 1916907 - 1916944 + g 75 -3.9 -4.72272 | overlap 1916909 1916910 GTGCCGCGTACTCGC GTTCGGCCTCGCTGAGC ATGC GGTAAGTGTGGCCGGTC TTTTTGCTCAGCCAC TERM 1681 1917050 - 1917060 + g 71 -8.2 -3.88559 | overlap 1917043 CTGGCCTGGCACAGG CGCC CTG GGCG TTTGTCACCGTCCTT Pput_1680 1921639 - 1917422 - | amino acid adenylation domain-containing protein TERM 1682 1919330 - 1919370 + g 80 -16.1 -2.60244 | opp_overlap 1919320, overlap 1919327 CACCACGCTGCGCAA TGCCAATGGCCGCTGCGGC TCG GCCGTGGTGGCCACTGCCA TCAGTTGCTTGAACG TERM 1683 1920808 - 1920761 - G 76 -14.1 -3.21416 | CAGGGCGATGACGAA GGGTTGCACGCCCTGCTGCCG GCTGAG CTGCAGCAGGGCCTGGAACAC CTCGGCGTCCAGTTG Pput_1681 1923534 - 1921846 - | cyclic peptide transporter Pput_1682 1924537 - 1923518 - | hypothetical protein TERM 1684 1924630 - 1924598 - R 82 -13.4 -3.50737 | overlap 1924594 1924592 ATGGATAAAGACGAA CCGCACCTGCCGAT GTTTA AGCGCCAGGTGCGG CACCCGGTTCAGCGC Pput_1683 1926053 - 1924614 - | RND efflux system outer membrane lipoprotein TERM 1685 1925814 - 1925846 + g 73 -13.3 -3.14344 | overlap 1925832 GCGAACCCGGGCCAT GGCCGCACCGACTTC GAA GCTGTCGGTGCGGGC TTGCTCCACCAGCTG Pput_1684 1928020 - 1926050 - | ABC transporter related Pput_1685 1929184 - 1928021 - | RND family efflux transporter MFP subunit TERM 1686 1929338 - 1929389 + r 77 -12.4 -3.27298 | opp_overlap 1929346 1929356, overlap 1929356 ACGTTTAAGCTGCAA CTTGCAAACACAAAAAAACCCGAC AGTT GTCGGGTTTTTTTGTTGACGCGAG TTACTGCTTGGCAGG TERM 1687 1929381 - 1929346 - R 95 -16.4 -3.60792 | opp_overlap 1929338 1929356, overlap 1929356 GCTGCAACTTGCAAA CACAAAAAAACCCGAC AGTT GTCGGGTTTTTTTGTT GACGCGAGTTACTGC TERM 1688 1929356 - 1929371 + r 100 -10.4 -5.7946 | opp_overlap 1929356 1929346, overlap 1929338 GCAAACACAAAAAAA CCCGAC AGTT GTCGGG TTTTTTTGTTGACGC TERM 1689 1929371 - 1929356 - R 100 -10.4 -5.88197 | opp_overlap 1929338 1929356, overlap 1929346 GCAAACACAAAAAAA CCCGAC AGTT GTCGGG TTTTTTTGTTGACGC Pput_1686 1929662 - 1929390 - | hypothetical protein TERM 1690 1929421 - 1929456 + g 74 -11.8 -3.42574 | gap 1, overlap 1929421 1929433 TCTGCCGGCGTAGCT GG-AGCCGGAGTAGCCG GAG CGGCTTCTTCGGCAGCC TTCTGCTCGGCTTCG Pput_1687 1929817 - 1930293 + | thioesterase superfamily protein Pput_1688 1930290 - 1930772 + | thioesterase superfamily protein TERM 1691 1930878 - 1930862 - g 75 -4.4 -4.78848 | TGTGGAAACACAAAA GGAAAC GTTGG GCTTCC AGACCGAGGTGAAGC TERM 1692 1932024 - 1931990 - g 78 -6.3 -4.56597 | opp_overlap 1931989 GGGCTTCTGGAAAAA CTTCGGTCAGGTGCT GAAAG AGGGCCCGGCCGAAG ACTTTGCCAACAAGG Pput_1689 1930842 - 1932746 + | heat shock protein 90 TERM 1693 1932763 - 1932778 + F 100 -11.8 -5.24531 | opp_overlap 1932763 TTGATGCACAGCAAA GCCCGC TTCG GCGGGC TTTTTTATGACGAGT TERM 1694 1932778 - 1932763 - f 83 -11.8 -3.84825 | opp_overlap 1932763 TTGATGCACAGCAAA GCCCGC TTCG GCGGGC TTTTTTATGACGAGT Pput_1690 1932810 - 1933535 + | dienelactone hydrolase Pput_1691 1934688 - 1933825 - | pirin domain-containing protein TERM 1695 1934123 - 1934084 - G 71 -13.6 -2.57795 | overlap 1934080 TTCATCATCAACTCA CCATCGAGCACGTACAGC GCCC GCTGCACATGCTCGGTCG GTACCAGCAAGGTGG TERM 1696 1935194 - 1935209 + G 74 -9 -3.85817 | ATGCTGTCAGCCATA TCGAGC GCAT GCTCGA TTTGTACCCGGGGCT Pput_1692 1934791 - 1935813 + | amidohydrolase 2 TERM 1697 1935953 - 1935921 - T 100 -15 -4.22678 | opp_overlap 1935927, overlap 1935927 CACAGGCAACACAAA CAAAAACGCCCCGA ACCAG TCGGGGCGTTTTCA TTGACAGCAGCAGCG TERM 1698 1935927 - 1935947 + T 100 -14 -4.4078 | opp_overlap 1935921 1935927 CAACACAAACAAAAA CGCCCCGA ACCAG TCGGGGCG TTTTCATTGACAGCA TERM 1699 1935947 - 1935927 - T 100 -14 -5.4659 | opp_overlap 1935927, overlap 1935921 CAACACAAACAAAAA CGCCCCGA ACCAG TCGGGGCG TTTTCATTGACAGCA Pput_1693 1937191 - 1935971 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 1700 1936814 - 1936849 + g 70 -11.8 -3.16267 | GCGGTATGGGCCGAC GCGCTTGACGCCTTTC TCAC GCAGGGTGTCCAGCGC TTCCATCTGGTTCAG Pput_1694 1937718 - 1937203 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1701 1937751 - 1937735 - R 72 -10.1 -3.62046 | opp_overlap 1937731, overlap 1937736 CGAGCTCCTCAATAA CCCCCTG CGG CAGGGGA TGAATCTTCCCGGCC Pput_1695 1939857 - 1937926 - | integral membrane sensor hybrid histidine kinase Pput_1696 1940744 - 1939854 - | hypothetical protein TERM 1702 1940474 - 1940491 + g 71 -8.3 -3.85698 | overlap 1940475 TGACCCGCATGACCA GCGCCGG TGGG CCGGCGG TTTCTCCCAGGCGCC Pput_1697 1942858 - 1940744 - | TonB-dependent receptor, plug TERM 1703 1941825 - 1941853 + g 72 -4.5 -4.57073 | gap 1, overlap 1941828 TCGTCAGTGGAAAGG GGGGCGC-CGGT CGCAAT ACCGCGCGCTAC TTTTTCGGCGAAGTC TERM 1704 1942994 - 1943020 + H 71 -7.3 -4.16016 | gap 1, opp_overlap 1942976 1942975, overlap 1942987 GCGCCGCCGGCGCGG TGCA-TCGCGAG CACG CTCGCGCCTGCA TTTGTTGCAACGTGG TERM 1705 1943460 - 1943437 - g 74 -11.8 -3.53012 | gap 1, overlap 1943438 CTGCTGCGCGGCAAA GCCC-TGGTCA GCC TGACCAAGGGC ATCGAAGCGCAAAGC gpsA 1943134 - 1944159 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Pput_1699 1944196 - 1944543 + | hypothetical protein Pput_1700 1944540 - 1944998 + | phosphohistidine phosphatase, SixA Pput_1701 1945149 - 1945535 + | hypothetical protein Pput_1702 1945553 - 1946416 + | hypothetical protein TERM 1706 1947142 - 1947162 + G 73 -11.1 -3.54424 | overlap 1947102 CTGGCGCGCCACACC GGGTTGCTG GAG CAGCTACCC TTTGAACAGGTGACA Pput_1703 1946413 - 1947267 + | alpha/beta hydrolase fold Pput_1704 1947377 - 1948171 + | hypothetical protein Pput_1705 1948184 - 1949233 + | hypothetical protein TERM 1707 1949491 - 1949519 + G 72 -4.5 -4.58424 | overlap 1949492 ACATGCTCGACGGGC TGTCACTGCTGCT GGC AGTGGCATTGGCG TTTTATCTGCTGGTG Pput_1706 1949472 - 1949561 + | K+-transporting ATPase, F subunit TERM 1708 1950566 - 1950556 - g 71 -8.2 -3.91911 | opp_overlap 1950562 TGGAGGGCAAGGAAA GCCG CTT CGGC ACCACCGGTTCGGTG TERM 1709 1951158 - 1951117 - g 100 -5 -5.40072 | gap 1, opp_overlap 1951117 1951155 1951157 TGGCGGCGAAAAAAA GCGCGCCGCTGGGGCAGAA CAGCT TCCCGACTCA-CGGCCCGC TGTTCACCGGCTTGC Pput_1707 1949571 - 1951265 + | potassium-transporting ATPase subunit A TERM 1710 1953194 - 1953225 + G 71 -13 -3.01712 | gap 1 GCTGGCGCTGCGTGG GGTGCG-CGTACAGG CGG CCAGTGCGGCGCACC TGTTGCGGCGCAACC Pput_1708 1951275 - 1953329 + | K+-transporting ATPase, B subunit TERM 1711 1953356 - 1953374 + G 72 -7.3 -4.2461 | TGACTGCTTATCTAC GCCCGGC ATTGA GCCTGGC TTTGTTGATGACCCT Pput_1709 1953340 - 1953897 + | potassium-transporting ATPase subunit C TERM 1712 1953983 - 1953926 - f 100 -19.9 -3.31501 | opp_overlap 1953917 1953944 1953944 1953947, overlap 1953916 AGGAAGCCTGTAGAA GCGGGTTTACCCGCGAATGCGGTGGTG GTGC CACTGACTTATTCGCGGGTAAACCCGC TCCTACACGTTAAGG TERM 1713 1954257 - 1954274 + G 73 -12.7 -3.18264 | GAAGCGTTGCTCGGA GGGCTGC ATCA GCAGCCC TTGCTGCGTAGCCAG Pput_1710 1954047 - 1956701 + | osmosensitive K+ channel signal transduction histidine kinase Pput_1711 1956698 - 1957393 + | two component transcriptional regulator Pput_1712 1958346 - 1957441 - | LysR family transcriptional regulator TERM 1714 1958046 - 1958068 + g 70 -7.7 -4.10453 | gap 1, overlap 1958067 CGGTCTGCAACTCGG GCGCCATGGC GATG GTCA-GGCGC TTTTCCAGGCCTTTG Pput_1713 1961347 - 1958417 - | hypothetical protein TERM 1715 1963396 - 1963380 - g 77 -4.3 -4.91109 | overlap 1963382 CTCGGAGCAGAAAAA CACCGCC AAC GGCAGCA ACGATGGCAACCATG TERM 1716 1963417 - 1963398 - g 70 -12.2 -3.18681 | overlap 1963410 CGCCAACGGCAGCAA CGATGGCA ACCA TGCCATCG GCGTGCCGACATTCC Pput_1714 1961539 - 1963728 + | TonB-dependent siderophore receptor TERM 1717 1963789 - 1963803 + T 74 -11.4 -3.37537 | overlap 1963761 CGATTGCGTCAGGGC GGCAGG GCG CCTGCC TTGGGTTTTGCGGTG Pput_1715 1965505 - 1963898 - | ABC transporter related Pput_1716 1966526 - 1965507 - | binding-protein-dependent transport systems inner membrane component Pput_1717 1967601 - 1966528 - | binding-protein-dependent transport systems inner membrane component TERM 1718 1966780 - 1966738 - G 70 -9.8 -3.62046 | overlap 1966740 1966763 GGAGCCTGTGAAGAA GATGCCGATGAACGCCGA AGGGAAA CCGGCGATCACCAGCAGC ATGGCGTTGCGGAAC TERM 1719 1967470 - 1967427 - G 70 -10.1 -3.64822 | opp_overlap 1967464 1967465 AGCCGGCCACGGAAA CCTCGGCGCCGCCACCTGC AATGCG GCTGGTGGCGCCTTCGAAG CCTTCGAGTTTGGCG Pput_1718 1969438 - 1967603 - | extracellular solute-binding protein TERM 1720 1968816 - 1968833 + g 76 -7.7 -4.26076 | gap 1 GGGATTTCCAGGTTG CCGCG-GT TGA ACTCGCGG TTTTCGTACCAGTGC Pput_1719 1971375 - 1969435 - | extracellular solute-binding protein Pput_1720 1972915 - 1971485 - | MltD domain-containing protein Pput_1721 1973795 - 1973016 - | hydroxyacylglutathione hydrolase Pput_1722 1973881 - 1974654 + | hypothetical protein rnhA 1974670 - 1975116 + | ribonuclease H Pput_1724 1975167 - 1975925 + | DNA polymerase III subunit epsilon TERM 1721 1976744 - 1976729 - g 71 -4.6 -4.46212 | opp_overlap 1976710 TGGCCTATCATAAAA GCCCGG TAGG CCAAGC CTTTCACCAGTTCTT Pput_1725 1976191 - 1978440 + | lysine decarboxylase Pput_1726 1978642 - 1978424 - | hypothetical protein TERM 1722 1979003 - 1979020 + G 71 -9.1 -3.71848 | opp_overlap 1979002 TTTCGCGATGAAATC CGCCGCA GTGA TGCGGTG TTGTTCGTCACCCCG Pput_1727 1978799 - 1979359 + | NADPH-dependent FMN reductase Pput_1728 1981535 - 1979463 - | TonB-dependent receptor TERM 1723 1980856 - 1980880 + g 71 -13.5 -2.63102 | opp_overlap 1980851, overlap 1980869 CGGTAACCGACATTG GCGGCAATGCC CTT GGCGCTGCCGC TGCTGTGCGCCTGGT TERM 1724 1981232 - 1981196 - G 75 -12.1 -3.57615 | opp_overlap 1981221, overlap 1981197 CGAACATCGTGTAAA CGCCGGAACCGTGCGCC CCC GGCGCGCGGTTGAGGCC CGAGCCGCGTATCGA TERM 1725 1981231 - 1981197 - G 78 -15.6 -2.74248 | opp_overlap 1981221, overlap 1981196 GAACATCGTGTAAAC GCCGGAACCGTGCGCC CCC GGCGCGCGGTTGAGGC CCGAGCCGCGTATCG Pput_1729 1981756 - 1982004 + | LuxR family transcriptional regulator Pput_1730 1982017 - 1982364 + | hypothetical protein Pput_1731 1982357 - 1982719 + | hypothetical protein Pput_1732 1983093 - 1982716 - | bacteriophage CI repressor Pput_1733 1983273 - 1983536 + | phage transcriptional activator, Ogr/delta TERM 1726 1983574 - 1983603 + T 82 -15.1 -3.02144 | opp_overlap 1983579, overlap 1983579 AAAACGTGCAGATAA AAAAACACCCCGC CTAG GCGGGGTGTTTTC TGTTACCGGGGCTGC TERM 1727 1983598 - 1983579 - T 100 -15 -5.71712 | opp_overlap 1983574 1983579 GTGCAGATAAAAAAA CACCCCGC CTAG GCGGGGTG TTTTCTGTTACCGGG TERM 1728 1983579 - 1983598 + T 100 -15 -4.66537 | opp_overlap 1983579, overlap 1983574 GTGCAGATAAAAAAA CACCCCGC CTAG GCGGGGTG TTTTCTGTTACCGGG Pput_1734 1985096 - 1983627 - | NADH dehydrogenase subunit N Pput_1735 1986636 - 1985104 - | NADH dehydrogenase subunit M Pput_1736 1988530 - 1986677 - | NADH dehydrogenase subunit L Pput_1737 1988835 - 1988527 - | NADH dehydrogenase subunit K Pput_1738 1989339 - 1988839 - | NADH dehydrogenase subunit J Pput_1739 1989898 - 1989350 - | NADH dehydrogenase subunit I Pput_1740 1990917 - 1989910 - | NADH dehydrogenase subunit H Pput_1741 1993628 - 1990914 - | NADH dehydrogenase subunit G TERM 1729 1991909 - 1991934 + g 82 -11.1 -4.07568 | CTGCATCGACCTTGG CGGCCGGTACG CGGG CGTACAGGTCG TTTTCCAGCACGACG TERM 1730 1992049 - 1992063 + g 82 -5.6 -4.82901 | overlap 1992050 GCCTCAGGTACCACC AGGCTC AGC GAGCCG TTTTTCTCGCGCAGC Pput_1742 1995122 - 1993761 - | NADH dehydrogenase I subunit F TERM 1731 1993963 - 1993974 + g 70 -7.2 -4.07568 | overlap 1993953 TCGATGTCCTCGGCG CGGC CTTG GCCG TTTTCCAGCGCGCGC Pput_1743 1995616 - 1995119 - | NADH dehydrogenase subunit E Pput_1744 1997400 - 1995619 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 1732 1996059 - 1996072 + g 73 -6.7 -4.25104 | TGTGGGCCAGCGGTA CTTCG AACT CGAAG TTTTCGTAGCCGGAG TERM 1733 1996631 - 1996643 + g 83 -4.8 -5.00616 | AAGCTGTGCCAGGAC TGGC GCTCG GCCA TTTTTTCGGCGCCAC TERM 1734 1997473 - 1997436 - R 81 -12.5 -3.5456 | opp_overlap 1997436, overlap 1997433 1997432 1997437 1997440 AACGTTAAGAATGAA GCCAGGCCGCCGGCTCC TTCG GGAGCGGGCGGCAGGTC GCTGGATCAGACTTC TERM 1735 1997471 - 1997437 - R 75 -13.5 -2.72013 | gap 1, opp_overlap 1997436, overlap 1997433 1997432 1997436 1997440 ACGTTAAGAATGAAG CCAGGCCGCCGGCTCC TTCG GGAGCGGGCGG-CAGG TCGCTGGATCAGACT TERM 1736 1997469 - 1997440 - R 80 -14.9 -2.63501 | opp_overlap 1997436, overlap 1997433 1997432 1997437 1997436 TTAAGAATGAAGCCA GGCCGCCGGCTCC TTCG GGAGCGGGCGGCA GGTCGCTGGATCAGA Pput_1745 1998157 - 1997480 - | NADH dehydrogenase subunit B Pput_1746 1998580 - 1998167 - | NADH dehydrogenase subunit A Pput_1747 1999626 - 1998964 - | YhhN family protein TERM 1737 1999662 - 1999674 + r 71 -6.9 -4.2558 | opp_overlap 1999656 CTGCCACAAGCATAG CCCTG ATC CGGGG TTTTGCTGCGGCCTG TERM 1738 1999898 - 1999863 - R 100 -24.2 -4.56597 | opp_overlap 1999867, overlap 1999867 TTTCTCGGGTAAAAA CAAAGGCCCGGAGCTT TCAC AAGCCCCGGGCCTTTG TTCAACCGCAACCCA TERM 1739 1999894 - 1999867 - R 100 -19.2 -4.85782 | opp_overlap 1999867, overlap 1999863 TCGGGTAAAAACAAA GGCCCGGAGCTT TCAC AAGCCCCGGGCC TTTGTTCAACCGCAA TERM 1740 1999867 - 1999894 + r 100 -17 -4.15044 | opp_overlap 1999867 1999863 TCGGGTAAAAACAAA GGCCCGGAGCTT TCAC AAGCCCCGGGCC TTTGTTCAACCGCAA Pput_1748 2001242 - 1999917 - | isocitrate lyase TERM 1741 2000214 - 2000238 + g 86 -5 -5.10208 | gap 1, overlap 2000214 CAGTTCGCGCTGGAA CTTGG-CGATG GTGG CGTCGTCCAGG TTTTTCTTCCAGTTG TERM 1742 2000618 - 2000636 + g 85 -5.9 -5.00616 | TCGGCACCAGCACCT TGCCGCC CATGT GGCCGCA TTTTTTAACCGAGGC Pput_1749 2002467 - 2001733 - | NolW domain-containing protein Pput_1750 2002623 - 2003798 + | hypothetical protein TERM 1743 2004296 - 2004269 - g 93 -8.4 -5.10461 | gap 1, overlap 2004271 TTGATCGAAGAAAAA TACGAC-GGCCTC GGC GAGGCCCGGCGCA TCGCCGGTAAATACG TERM 1744 2004294 - 2004271 - g 76 -8.8 -4.17914 | gap 1, overlap 2004269 GATCGAAGAAAAATA CGAC-GGCCTC GGC GAGGCCCGGCG CATCGCCGGTAAATA Pput_1751 2003852 - 2005561 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1745 2005595 - 2005605 + F 72 -2.4 -4.85599 | CAAATTCCGTAACAT CGCG CCC CTCG TTTTTCTAACGTCCG Pput_1752 2005645 - 2007087 + | sulphate transporter TERM 1746 2007165 - 2007126 - T 95 -17.2 -3.53012 | gap 1, opp_overlap 2007127, overlap 2007127 TTCTTCGCGGGTAAA CCCGCGCCTAC-GGGGGAT CAC ATACCCCTGTAGGCGCGGT TTTACCCGCGAAGAG TERM 1747 2007164 - 2007127 - T 100 -20.7 -2.71712 | gap 1, opp_overlap 2007127, overlap 2007126 TCTTCGCGGGTAAAC CCGCGCCTAC-GGGGGAT CAC ATACCCCTGTAGGCGCGG TTTTACCCGCGAAGA TERM 1748 2007127 - 2007164 + T 100 -22.9 -4.07568 | gap 1, opp_overlap 2007127 2007126 TCTTCGCGGGTAAAC CCGCGCCTACGGGGG-AT CAC ATACCCCTGTAGGCGCGG TTTTACCCGCGAAGA Pput_1753 2009311 - 2007200 - | elongation factor G TERM 1749 2007811 - 2007828 + g 77 -2.7 -5.03314 | gap 1, overlap 2007805 2007813 2007814 CGAAACGCCCCTCGA TCTCGCAG GTA TTGCG-GA TTTTTTCCCGGTAGG TERM 1750 2007977 - 2008017 + g 87 -6.1 -5.1861 | gap 1, opp_overlap 2007980, overlap 2007980 2007980 GGTACGCACGCGGAA TGAGGGGTCTTCCTGGGC CAGCTT GCCCAGCGCGATCCC-CA TTTTTTCCTGGTCGG Pput_1754 2009867 - 2009385 - | hypothetical protein TERM 1751 2009536 - 2009558 + g 85 -6.2 -5.03145 | opp_overlap 2009536, overlap 2009525 ACCAGGTTGAGATCA GCCTTGGTGT ACG ACAGCCAGGC TTTTTTCAACACTTG Pput_1755 2010057 - 2010359 + | hypothetical protein Pput_1756 2011613 - 2010363 - | aminotransferase class-III Pput_1757 2012690 - 2011794 - | LysR family transcriptional regulator TERM 1752 2012730 - 2012715 - H 81 -3.2 -5.17353 | opp_overlap 2012727 ATACCGAGCAAAAAA GGAAGG AGTT CATTCC ATAAAGGAATTATGT TERM 1753 2013672 - 2013692 + G 74 -6.1 -4.42653 | opp_overlap 2013652 GCCGCGCCACCAACC TGGTGGTGT ACC GCATCGCCA TTTTCTACCTGGCGT Pput_1758 2012948 - 2014330 + | amino acid permease-associated region Pput_1759 2014388 - 2014885 + | hypothetical protein Pput_1760 2014973 - 2015668 + | glutathione S-transferase domain-containing protein Pput_1761 2017465 - 2015849 - | phosphate transporter TERM 1754 2016274 - 2016284 + g 75 -3.2 -4.87665 | TGTCGGCATCGAATG TCAC CAG GTGG TTTTTCTCCATGAGG Pput_1762 2017595 - 2017981 + | hypothetical protein Pput_1763 2017992 - 2018435 + | GCN5-related N-acetyltransferase Pput_1764 2018543 - 2018932 + | helix-turn-helix domain-containing protein Pput_1765 2018996 - 2019634 + | two component LuxR family transcriptional regulator TERM 1755 2020019 - 2020009 - g 86 -8.2 -4.56597 | opp_overlap 2020008 2020009, overlap 2020010 CCGTGGGGCGAAAAA GGCC AAG GGCC GTTACTTTGGCCCGT TERM 1756 2020325 - 2020313 - g 74 -4.7 -4.59773 | opp_overlap 2020316 CTCGATTTCGAAAAA GCCGC CGA GCTGC GCGACCAGATCGCCT TERM 1757 2020382 - 2020408 + G 70 -12.2 -3.14211 | opp_overlap 2020371 TACATCGAGGGCGGC AGCGGCGATGTC GAC GTCATCGCCGCC TTCGTCAACCCGGGT uvrC 2019641 - 2021464 + | excinuclease ABC subunit C Pput_1767 2021498 - 2022058 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1758 2022259 - 2022246 - T 100 -9.5 -5.01732 | opp_overlap 2022246 AAGTCGTTGAAAAAA GGCCC TTCG GGGCC TTTTTTCGTTCGAAT TERM 1759 2022246 - 2022259 + T 100 -9.5 -5.27477 | opp_overlap 2022246 AAGTCGTTGAAAAAA GGCCC TTCG GGGCC TTTTTTCGTTCGAAT Pput_1768 2023032 - 2022355 - | protein-disulfide isomerase-like protein TERM 1760 2022994 - 2022972 - G 89 -12.7 -4.13282 | opp_overlap 2022980 AGCACAGTGCCAAAA CCGCGGCTG CGAGC CAGCCGCAG GCCCACTTTAGGTTG TERM 1761 2023252 - 2023221 - R 74 -10.2 -3.61715 | gap 1, opp_overlap 2023218 2023248 CACGGTGCGGAACAA CGGC-TCCACCTTTG TTT CAACGATGGACGCCG CGGGGTTAAACGCTT Pput_1770 2024220 - 2023705 - | sigma-70, region 4 type 2 TERM 1762 2024430 - 2024409 - R 100 -13 -5.85178 | opp_overlap 2024425, overlap 2024425 AAGAGCCAAAAAAAA GACCCGGC AAAAAA GCCGGGTC AAAAACCGTGATTAG Pput_1771 2024968 - 2024669 - | hypothetical protein Pput_1772 2025099 - 2025752 + | putative prophage repressor Pput_1773 2025809 - 2026483 + | putative prophage repressor Pput_1774 2028583 - 2026631 - | carbamoyl-phosphate synthase L chain, ATP-binding TERM 1763 2028587 - 2028627 + r 76 -6.8 -4.56597 | gap 1, overlap 2028572 GGGGCGGCTCATGGG CGCGGCTCCTTCTTGTCAA CGGT TTGCCAGGCAGG-GCGGCG TTTTTCCAGGAAAGC Pput_1775 2029395 - 2028580 - | gamma-carboxygeranoyl-CoA hydratase TERM 1764 2028668 - 2028641 - G 71 -9.1 -3.72576 | gap 1 CGTTTTTCCAGGAAA GCG-CGCAGGCC CTCCT GGCCTTCGGCGC TGACGCGGATACGGG Pput_1776 2031006 - 2029399 - | propionyl-CoA carboxylase Pput_1777 2032189 - 2031026 - | acyl-CoA dehydrogenase domain-containing protein TERM 1765 2032619 - 2032642 + G 76 -13.9 -3.17723 | overlap 2032596 TGTTGCGACAGCGAG GCCCTGGTG TCCCGC CACCAGGGC TTGCGTTACAGCTGG TERM 1766 2032716 - 2032683 - g 73 -11 -3.6106 | gap 1, overlap 2032685 CCGAACAGGTCGAAA TACACGCCC-GCGCG CTGAT CGCACTGGGCGTGAA CACCGGCGACCGTGT TERM 1767 2032714 - 2032685 - g 77 -13.6 -3.38201 | gap 1, overlap 2032683 GAACAGGTCGAAATA CACGCCC-GCGCG CTGAT CGCACTGGGCGTG AACACCGGCGACCGT Pput_1778 2032514 - 2034196 + | acyl-CoA synthetase Pput_1780 2035492 - 2034635 - | hypothetical protein Pput_1782 2037477 - 2036341 - | hypothetical protein TERM 1768 2038084 - 2038050 - g 75 -14.2 -2.72344 | opp_overlap 2038050 GCCCATGGCGAACGA TCACCCGGACCAGGCC ATT AGCCTGGCCCAGGCGC TGTTGGCGCCACGCA TERM 1769 2039498 - 2039510 + G 78 -4.7 -4.79352 | TCTTCCTGCACACCT CCGGC CGC GCAGG TTTTCTTATCCGTGC Pput_1783 2038006 - 2040024 + | alpha amylase, catalytic region TERM 1770 2041417 - 2041428 + G 83 -7.2 -4.56597 | overlap 2041416 GCAGTGGTCGCCAGA CCGC AACG GCGG TTTTTCCCGCGCCGA Pput_1784 2040179 - 2043499 + | trehalose synthase Pput_1785 2043496 - 2045706 + | glycogen branching enzyme Pput_1786 2046997 - 2045921 - | outer membrane autotransporter TERM 1771 2046382 - 2046398 + g 70 -7.9 -4.07568 | TTGCATGGCCACTGT CGTCCAG GCG CTGGCCG TTTTCGCCACGGCCC TERM 1772 2046998 - 2047008 + r 72 -2.4 -4.98911 | CGAGGTGCTTTTCAT GGCG GAT CTCC TTTGTTTTTGTGGTG Pput_1787 2048109 - 2047315 - | endonuclease/exonuclease/phosphatase TERM 1773 2048184 - 2048153 - R 100 -14.4 -4.07568 | CTGTCGCCGCTAAAA CCTGTGGCAGCGGG CAAA CCCGCTCTCACAGG TATGGCGTAGCGATC Pput_1788 2050384 - 2048231 - | glycogen debranching enzyme GlgX TERM 1774 2050326 - 2050359 + g 77 -4.3 -4.88918 | AGGGGGAAGGGCATG CCTTCGCGGATGCGC GATG GTGCGACCGAGCGGG TTTTCTTTGGGGTGC TERM 1775 2050491 - 2050452 - R 100 -21.6 -3.53012 | gap 1, opp_overlap 2050452 CTCTTCGCGGGTAAA CCCGCTCCTACAGGTCATC ACA GGTG-CCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 1776 2050452 - 2050491 + r 100 -23.8 -3.53012 | gap 1, opp_overlap 2050452 CTCTTCGCGGGTAAA CCCGCTCCTACAGGTCATC ACA GGTG-CCTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_1789 2050785 - 2050519 - | hypothetical protein Pput_1790 2053574 - 2050800 - | malto-oligosyltrehalose synthase TERM 1777 2051384 - 2051427 + g 88 -16.1 -3.39327 | gap 1 GTGCGCCGGGGCAGG CCAGCAGCTGCGCCGCGTCG GCCAG CGACTTG-CGCAGTTGCTGG TTCTCGCTGTCCAGC TERM 1778 2053086 - 2053100 + g 76 -10 -3.87815 | overlap 2053092 GTAATGGGCCACTTG CAGCAG CCC CTGCTG TTTGTCGAACTGCAG Pput_1791 2055640 - 2053571 - | 4-alpha-glucanotransferase TERM 1779 2054861 - 2054841 - G 71 -8.1 -3.90291 | overlap 2054827 2054845 AGCGCTTCAAGCAAA CGCAGCCGG GCG CTGGCGGCG CGTGGCCAGTCGACC Pput_1792 2057379 - 2055637 - | malto-oligosyltrehalose trehalohydrolase TERM 1780 2056856 - 2056817 - G 74 -13.6 -2.85351 | gap 1 TGGTTGTACACCACA TCGACCAGCACCATCAGCC CGT GGCCG-TGGGCCTGGTCGA CCAGTGCGCACAGCT glgA 2058953 - 2057394 - | glycogen synthase TERM 1781 2057894 - 2057910 + g 71 -5.7 -4.25104 | AGTCGGCCACGCCCA GGGTCAG GTC CAGGCCC TTTTGATAGACCAGC TERM 1782 2059121 - 2059161 + r 71 -9.1 -3.71552 | gap 2, opp_overlap 2059142 GACTGGTTGGGGTGT GTGGGCC-GA-GGATCGGG AATAG CCCGATGCGTCTGGCCTAC TTATGTTCATGACCT TERM 1783 2059289 - 2059272 - R 73 -5.5 -4.6526 | opp_overlap 2059271 2059273, overlap 2059273 AGAAAGTGCTAAAAA GGTGACC CACT GGTCACT ATTGTTATGTGCGCA Pput_1794 2059757 - 2059602 - | hypothetical protein Pput_1795 2059972 - 2060955 + | 6-phosphogluconate dehydrogenase-like protein TERM 1784 2061462 - 2061432 - g 74 -4.7 -4.56597 | gap 2, overlap 2061433 GTGGTGGTTGAAAAA CCGTTCGGCACCGAC CTG GCCAGCGCCG-A-GG CGCTCAACGCCTGCC Pput_1796 2060952 - 2062457 + | glucose-6-phosphate 1-dehydrogenase Pput_1797 2062573 - 2064369 + | glycoside hydrolase 15-related Pput_1798 2064436 - 2064792 + | glyoxalase/bleomycin resistance protein/dioxygenase Pput_1799 2064792 - 2065412 + | TetR family transcriptional regulator Pput_1800 2066867 - 2065593 - | dihydropyrimidine dehydrogenase TERM 1785 2066325 - 2066271 - G 83 -15.2 -3.14344 | gap 4, opp_overlap 2066270, overlap 2066276 GATGGTGTTGATCAA CGACA-CCG-CA-TCGGCCC-CGCCCCG GTG CGCGGCGCGGGCCGACTGGCGGATATCG GTGATGTTTGGCGTA TERM 1786 2066319 - 2066276 - G 83 -16.1 -2.93723 | gap 3, opp_overlap 2066270, overlap 2066271 TGTTGATCAACGACA CCG-CA-TCGGCCC-CGCCCCG GTG CGCGGCGCGGGCCGACTGGCGG ATATCGGTGATGTTT Pput_1801 2068304 - 2066868 - | putative oxidoreductase TERM 1787 2066993 - 2067012 + g 71 -5.6 -4.25104 | CGCCTGCGTACACGC CCGGCAGG CTGG TCTGCAGG TTTTCGTCCACGCGG TERM 1788 2067240 - 2067261 + g 72 -12.3 -3.28001 | overlap 2067234 GGCATCAGGGCGGGC CCAGGTGTG CAGG CGCACCTGG TTGGCTTTGGCAATG Pput_1802 2069908 - 2068418 - | dihydropyrimidinase TERM 1789 2070369 - 2070336 - g 81 -10.3 -4.16842 | gap 1 CGCACCTGGAACAAA TGGCACATCACCGCCC TGT GGGTGGGGATGT-CCA TCTGCGTACCCACCT Pput_1803 2070201 - 2071691 + | permease for cytosine/purine, uracil, thiamine, allantoin TERM 1790 2072849 - 2072881 + G 71 -6.2 -4.26903 | gap 1, overlap 2072852 CGGGGCATGACGCGA TCTTCCTGGCCGAGC TGGG GC-CGGCGGGGATGA TTTTCGTGCCGTGCG Pput_1804 2071741 - 2073024 + | allantoate amidohydrolase TERM 1791 2073053 - 2073041 - T 74 -10.5 -3.61715 | CACTGGCCTCAAGAA GGCCG TTA CGGCC AAGGTGATAGCGCTG Pput_1805 2073980 - 2073021 - | ribonuclease Z TERM 1792 2073332 - 2073344 + g 76 -9.1 -4.1021 | overlap 2073322 CCCTGGCGACGGCTG CCAGC AGC GCTGG TTTGTCGTTGTCCCC TERM 1793 2074042 - 2074007 - R 74 -11.2 -3.32844 | gap 1, overlap 2074008 TGTTTCAGGCCAGAA GCGGCCAAGGTGATACG GGG CGCA-CACCTTAGCCGG ATTGCCACCCGCCGT TERM 1794 2074041 - 2074008 - R 78 -14.7 -2.59564 | gap 1, overlap 2074007 GTTTCAGGCCAGAAG CGGCCAAGGTGATACG GGG CGCA-CACCTTAGCCG GATTGCCACCCGCCG Pput_1806 2074613 - 2074068 - | Lipocalin family protein nhaB 2076262 - 2074760 - | sodium/proton antiporter TERM 1795 2075791 - 2075780 - G 81 -7.2 -4.41548 | overlap 2075781 GTAGACCGCATAAAA GCCG ACCG CGGC GCTGATGATCACGGC Pput_1808 2076383 - 2077225 + | enoyl-CoA hydratase nudC 2077262 - 2078092 + | NADH pyrophosphatase Pput_1810 2078940 - 2078161 - | hypothetical protein TERM 1796 2078473 - 2078455 - G 72 -11.6 -3.30243 | ACTGACCGTCCAGAA CGCCCCGG TAC CCGGGCCG GCTACGCCGTCGTAG Pput_1811 2079997 - 2079086 - | hypothetical protein TERM 1797 2080192 - 2080135 - R 100 -22.2 -3.53012 | gap 1, opp_overlap 2080135 CCTTTCGCGGGTAAA CCCGCTCCTACAGGTACTGCACAGGTC TTGAG GACG-GTGGAGGACCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 1798 2080135 - 2080192 + r 100 -23.5 -3.53012 | opp_overlap 2080135 CCTTTCGCGGGTAAA CCCGCTCCTACAGGTACTGCACAGGTC TTGA GGACGGTGGAGGACCTGTAGGAGCGGG TTTACCCGCGAAAGG Pput_1812 2081057 - 2080227 - | alpha/beta hydrolase fold Pput_1813 2082532 - 2081243 - | FAD dependent oxidoreductase Pput_1814 2084686 - 2082725 - | DNA topoisomerase III TERM 1799 2084862 - 2084824 - R 95 -17.5 -3.53012 | opp_overlap 2084824 CTCTTCGCGGGTAAA CCCGCTCCTACAGGGAC GCGTG GTGCTTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 1800 2084824 - 2084862 + r 100 -19.7 -3.53012 | opp_overlap 2084824 CTCTTCGCGGGTAAA CCCGCTCCTACAGGGAC GCGTG GTGCTTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_1815 2085323 - 2084895 - | GCN5-related N-acetyltransferase TERM 1801 2084996 - 2084970 - G 70 -10 -3.62096 | GCTGACTACGCGAAA GCCCAGCCGCTC ATA GAACGGCGTGGC GTGTACCTGGGCGCT Pput_1816 2086482 - 2085316 - | cupin 4 family protein TERM 1802 2086545 - 2086527 - R 100 -17.4 -5.08601 | opp_overlap 2086527 2086529 2086538 GTACGGGAATAAAAA CGCCCGGC CAG GCCGGGCG TTGTACGCGACGCTC TERM 1803 2086527 - 2086545 + r 91 -17.4 -3.28924 | opp_overlap 2086527, overlap 2086529 2086538 GTACGGGAATAAAAA CGCCCGGC CAG GCCGGGCG TTGTACGCGACGCTC Pput_1817 2087982 - 2086564 - | adenylosuccinate lyase Pput_1818 2088719 - 2088093 - | hypothetical protein trmU 2089840 - 2088716 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Pput_1820 2090340 - 2089900 - | NUDIX hydrolase TERM 1804 2090463 - 2090483 + r 73 -8.1 -4.07568 | overlap 2090464 GCGGGCTTGCCCGCG AAGGGCCGC AGA GCGGCCCCA TTTTCCCAGAAAGCA TERM 1805 2090464 - 2090482 + r 70 -11.6 -3.04398 | overlap 2090463 CGGGCTTGCCCGCGA AGGGCCGC AGA GCGGCCCC ATTTTCCCAGAAAGC TERM 1806 2090494 - 2090530 + r 91 -17.4 -3.33696 | opp_overlap 2090496 2090503, overlap 2090496 2090503 CCCCATTTTCCCAGA AAGCACAAACCCCGGT GCGTG GCCGGGGTTTGTGCTG TTACTTCAAGCGAAC TERM 1807 2090496 - 2090528 + r 100 -20 -3.23853 | opp_overlap 2090496 2090503, overlap 2090494 2090503 CCATTTTCCCAGAAA GCACAAACCCCGGT GCGTG GCCGGGGTTTGTGC TGTTACTTCAAGCGA TERM 1808 2090528 - 2090496 - R 100 -19.3 -3.86346 | opp_overlap 2090496 2090494 2090503, overlap 2090503 CCATTTTCCCAGAAA GCACAAACCCCGG TGCGTGG CCGGGGTTTGTGC TGTTACTTCAAGCGA TERM 1809 2090503 - 2090521 + r 79 -9.5 -4.08058 | opp_overlap 2090496 2090503, overlap 2090496 2090494 CCCAGAAAGCACAAA CCCCGGT GCGTG GCCGGGG TTTGTGCTGTTACTT TERM 1810 2090521 - 2090503 - R 75 -8.8 -4.17701 | opp_overlap 2090503 2090496 2090494, overlap 2090496 CCCAGAAAGCACAAA CCCCGG TGCGTGG CCGGGG TTTGTGCTGTTACTT Pput_1821 2092850 - 2090547 - | isocitrate dehydrogenase, NADP-dependent Pput_1822 2093187 - 2094443 + | isocitrate dehydrogenase, NADP-dependent TERM 1811 2094489 - 2094451 - T 88 -16.8 -3.16117 | opp_overlap 2094456, overlap 2094456 ACATGTAAGGCAACA GAAAACCGGCCGTCTCCT GTA AAGAGGCGGCCGGTTTTT TCGTCTATCGGCACA TERM 1812 2094484 - 2094456 - T 100 -16.7 -4.7033 | opp_overlap 2094456, overlap 2094451 TAAGGCAACAGAAAA CCGGCCGTCTCCT GTA AAGAGGCGGCCGG TTTTTTCGTCTATCG TERM 1813 2094456 - 2094484 + T 100 -16.7 -5.24989 | opp_overlap 2094451 2094456 TAAGGCAACAGAAAA CCGGCCGTCTCCT GTA AAGAGGCGGCCGG TTTTTTCGTCTATCG Pput_1823 2094781 - 2094515 - | cold-shock DNA-binding domain-containing protein TERM 1814 2094566 - 2094584 + g 70 -10.2 -3.62354 | overlap 2094564 GGGTCTGGCAGCCTC TGCCGCGG CGG CCGCAGCA TCTTTGATTTCAACG clpS 2095012 - 2095374 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1815 2097258 - 2097248 - g 71 -8.2 -3.85817 | ACGCCGGTGCAGAAA CCGC GGC GCGG GCGTCGATCGGCTTC Pput_1825 2095405 - 2097675 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 1816 2097677 - 2097705 + T 100 -18.9 -3.53012 | overlap 2097678 CTGAGGTCGCGTGAT GTGCAGGGGCTGC CTT GCAGCCCCTGCAG TTTCAAAAGGCACAA TERM 1817 2097678 - 2097704 + T 100 -22.4 -2.71712 | overlap 2097677 TGAGGTCGCGTGATG TGCAGGGGCTGC CTT GCAGCCCCTGCA GTTTCAAAAGGCACA TERM 1818 2097754 - 2097714 - T 100 -17 -4.11216 | opp_overlap 2097725, overlap 2097725 CCTGCAGTTTCAAAA GGCACAAAAAAGCCCGGC ACCTG GCCGGGCTTTTTCATGGC TTGAGTTTAGCGCGC TERM 1819 2097743 - 2097725 - T 100 -13.1 -5.35222 | opp_overlap 2097725, overlap 2097714 AAAAGGCACAAAAAA GCCCGGC ACCTG GCCGGGC TTTTTCATGGCTTGA TERM 1820 2097725 - 2097743 + T 100 -13.1 -4.77157 | opp_overlap 2097714 2097725 AAAAGGCACAAAAAA GCCCGGC ACCTG GCCGGGC TTTTTCATGGCTTGA infA 2097979 - 2097761 - | translation initiation factor IF-1 Pput_1827 2098788 - 2098081 - | arginyl-tRNA-protein transferase TERM 1821 2098588 - 2098562 - G 76 -11.4 -3.72576 | opp_overlap 2098575 CGGTTGGGGATGAAA CGCGCCGCCGGG ATG CGCGCCGGCACG CAGGCGTTGCAGTTC aat 2099525 - 2098845 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1822 2100914 - 2100904 - g 71 -4.6 -4.45544 | opp_overlap 2100904, overlap 2100905 2100907 GGCGATGAAGGAAAA GCAG GCG CCGC TGTTCGTCGACAGCG Pput_1829 2099933 - 2102428 + | cell divisionFtsK/SpoIIIE TERM 1823 2102438 - 2102465 + F 100 -18.4 -4.09864 | opp_overlap 2102433 2102435, overlap 2102439 GACTGATGAACACCC TGCCGGGCGCCA ACGG TGGCGCCCGGCC TTTTCAACGCTCAAT TERM 1824 2102439 - 2102464 + F 100 -21.9 -3.05597 | opp_overlap 2102433 2102435, overlap 2102438 ACTGATGAACACCCT GCCGGGCGCCA ACGG TGGCGCCCGGC CTTTTCAACGCTCAA lolA 2102491 - 2103114 + | outer-membrane lipoprotein carrier protein Pput_1831 2103127 - 2104452 + | recombination factor protein RarA Pput_1832 2104449 - 2104823 + | CrcB protein Pput_1833 2104854 - 2106134 + | seryl-tRNA synthetase Pput_1834 2106135 - 2107526 + | uroporphyrin-III C-methyltransferase Pput_1835 2108591 - 2107632 - | glutathione S-transferase-like protein Pput_1836 2109687 - 2108686 - | hypothetical protein Pput_1837 2110019 - 2109684 - | DsrC family protein TERM 1825 2109769 - 2109780 + g 70 -7.2 -4.07568 | AGGCGGTTAAGGTGC GGGC TGTT GCCC TTTTCAGGGCCCAGC Pput_1838 2110312 - 2110016 - | DsrH family protein Pput_1839 2110671 - 2110312 - | hypothetical protein Pput_1840 2111104 - 2110673 - | hypothetical protein TERM 1826 2111109 - 2111140 + r 100 -21.6 -3.53366 | opp_overlap 2111109 TGATAAAGCAAAAAA GCCCGCACCCGCTT GTGC AAGCGGGCGCGGGC TTATCATTCAATCTC TERM 1827 2111140 - 2111109 - R 100 -23.8 -5.42514 | opp_overlap 2111109 TGATAAAGCAAAAAA GCCCGCACCCGCTT GTGC AAGCGGGCGCGGGC TTATCATTCAATCTC Pput_1841 2112540 - 2111161 - | uracil-xanthine permease TERM 1828 2112000 - 2111980 - G 73 -11.2 -3.57144 | TTCGCCATTGGCAAA GGTGCCAT TGGCC ATGGCACC AAAGCCGCCTCCCAT TERM 1829 2112818 - 2112833 + r 79 -11.8 -3.61398 | opp_overlap 2112818 AGCGCCTACAAAAAA GCCCGC CTAA GCGGGC TTGTTGCGGCACAGC TERM 1830 2112833 - 2112818 - R 100 -11.8 -5.24531 | opp_overlap 2112818 AGCGCCTACAAAAAA GCCCGC CTAA GCGGGC TTGTTGCGGCACAGC Pput_1842 2113526 - 2112855 - | hypothetical protein TERM 1831 2113756 - 2113773 + H 100 -11.3 -4.92239 | opp_overlap 2113756 TCCGCCATATTCAAA GCCCTGA TTAT TCAGGGC TTTTTGCGTTTTTGG TERM 1832 2113773 - 2113756 - H 80 -11.3 -3.70902 | opp_overlap 2113756 TCCGCCATATTCAAA GCCCTGA TTAT TCAGGGC TTTTTGCGTTTTTGG TERM 1833 2114158 - 2114170 + H 91 -7.7 -5.1861 | CAATTGATCCGCGCT TCCAG TTC CTGGA TTTTTTGCTGCTCAG Pput_1844 2114710 - 2115477 + | short-chain dehydrogenase/reductase SDR TERM 1834 2115489 - 2115513 + T 70 -12.2 -2.64472 | gap 1, overlap 2115493 GTAATCGGCACTATT G-CAAGCGCCC AAGC GGGCGCTTGTC TAGCTTTGCGCCATC TERM 1835 2115493 - 2115508 + T 79 -11.8 -3.57797 | overlap 2115489 TCGGCACTATTGCAA GCGCCC AAGC GGGCGC TTGTCTAGCTTTGCG Pput_1845 2116391 - 2115513 - | LysR family transcriptional regulator TERM 1836 2115789 - 2115814 + g 78 -3.1 -4.98255 | overlap 2115794 CTCAATAGACGCATA CCAGTCCTTCC ACGC GTGGGGACGGG TTTTTGTGGTTAGCA TERM 1837 2116181 - 2116162 - G 71 -5.6 -4.30014 | gap 1, overlap 2116163 TGTATCAAGGCAAAA GCC-CTGGC CAA GCCTGAGGC GAGGCGTGCTCCCTC Pput_1846 2116570 - 2117847 + | ribulose-bisphosphate carboxylase Pput_1847 2117851 - 2119242 + | type III effector Hrp-dependent outer TERM 1838 2119514 - 2119528 + G 74 -5.7 -4.49556 | CCCGACTGGCCTCTC TTGCG TCATT CGCAA TTTCTTTCGTGGCGC Pput_1848 2119303 - 2120646 + | major facilitator transporter Pput_1849 2120753 - 2122222 + | pyruvate kinase Pput_1850 2122550 - 2123818 + | phosphopyruvate hydratase Pput_1852 2126491 - 2125589 - | LysR family transcriptional regulator TERM 1839 2126938 - 2126965 + G 71 -11.4 -3.41693 | AAGAGATGTTTGATC GGTCTTTTGACA TCAA TGTCAAAGGGCC TTACTTCCTGATCCA TERM 1840 2127126 - 2127084 - g 81 -12.8 -3.72893 | opp_overlap 2127084 TACGCGGCGACCAAA GCAGCGCTGCTGAATATGTC GAA AACACTTTCAACAGAGCTGC TTGATCGCGGTGTTC Pput_1853 2126622 - 2127368 + | short chain dehydrogenase Pput_1854 2127472 - 2128155 + | glutathione S-transferase domain-containing protein Pput_1855 2128175 - 2128981 + | hypothetical protein Pput_1857 2129837 - 2129457 - | helix-turn-helix domain-containing protein TERM 1841 2129690 - 2129674 - G 72 -4.3 -4.59511 | overlap 2129675 AACATTCGCGAAAAA TGGCTGC GCG ACAGCCC GCATGCTGCAGCAAG Pput_1858 2130688 - 2130002 - | isochorismatase hydrolase TERM 1842 2130133 - 2130152 + g 76 -5.6 -4.62069 | TGACCAGTTCCATGA CCGCATCG TAGG TGTTGCGG TTTTTCCAGTCGCGC TERM 1843 2130463 - 2130504 + g 73 -10.7 -3.64599 | opp_overlap 2130463 GAGCGTCAGGGAAGA CCGCGAGCAGCTCGGGGTA GGTA TGCCCGGAGAAGCTCTCGG TTTCGACTGTGGTGA Pput_1859 2130896 - 2131357 + | endoribonuclease L-PSP Pput_1860 2132363 - 2131377 - | LysR family transcriptional regulator Pput_1861 2132654 - 2132926 + | peptidase TERM 1844 2132953 - 2132973 + T 100 -11.1 -5.45726 | GTTGCTCTCTGATCG GCCCGCG ATTTGTG CGCGGGC TTTTTTTCGCCTATC Pput_1862 2133422 - 2133096 - | hypothetical protein TERM 1845 2133445 - 2133459 + r 82 -8.6 -4.65916 | CACCTCGTGTGTTCA CACAGA GAG TCTGTG TTTTCTTCGGATGCC Pput_1863 2134568 - 2133774 - | hypothetical protein TERM 1846 2134679 - 2134662 - H 91 -9.8 -4.68908 | TCTAGGCAAAAGAAA GCCCGC TGCTAG GCGGGC TAATGGGAGCTTCTA TERM 1847 2134921 - 2134904 - H 80 -11.3 -3.73968 | opp_overlap 2134904 AAAGGCGTGAGGAAA GCCCTGA TTAT TCAGGGC TTTTTGCGATTCTTA TERM 1848 2134904 - 2134921 + H 100 -11.3 -4.70626 | opp_overlap 2134904 AAAGGCGTGAGGAAA GCCCTGA TTAT TCAGGGC TTTTTGCGATTCTTA Pput_1865 2135381 - 2136589 + | major facilitator transporter Pput_1866 2136746 - 2137351 + | TetR family transcriptional regulator Pput_1867 2138814 - 2137453 - | chloride channel, core Pput_1868 2140312 - 2138951 - | Na+/H+ antiporter NhaA TERM 1849 2140075 - 2140058 - G 80 -5.5 -4.78107 | opp_overlap 2140057 2140060 CACGACCAGGAAAAA GATGGTC ATCA GGCCATC ATTGATCCAGAAATG Pput_1869 2142314 - 2140860 - | cation transporter TERM 1850 2142575 - 2142559 - R 82 -13.7 -3.53012 | opp_overlap 2142558 2142555, overlap 2142538 CCTTGTGTCGCGAAA GGGCTGC GGA GCAGCCC CTGGATTTCAGCGTG Pput_1870 2143323 - 2142682 - | 3-oxoacid CoA-transferase, B subunit TERM 1851 2143286 - 2143306 + g 73 -3.1 -4.78107 | GCGGCCACGCGTTGG GCCATCTCG GTG CGGGAGAGC TTTTTGGTGATGGTC Pput_1871 2144027 - 2143332 - | 3-oxoacid CoA-transferase, A subunit TERM 1852 2143853 - 2143866 + g 71 -9.5 -3.75738 | CGGCCAGGCCGATCT CGCCG TTGC CGGCG TTGTTGCTGATGATG Pput_1872 2144419 - 2146584 + | methyl-accepting chemotaxis sensory transducer Pput_1874 2147687 - 2147061 - | SMP-30/gluconolaconase/LRE domain-containing protein Pput_1875 2148532 - 2147684 - | NAD-dependent epimerase/dehydratase TERM 1853 2147801 - 2147828 + g 78 -15.6 -2.75481 | overlap 2147803 TTTCGGCTGCTGCTC CAGTGCCGGGCG GAAG CGTTCGGCACTG TCCTTCGGGTTGAAA Pput_1876 2149333 - 2148608 - | oligogalacturonate-specific porin TERM 1854 2149956 - 2149916 - g 81 -3.8 -5.03314 | gap 1, overlap 2149917 2149918 TTGACCGCGAAAAAA TCTGGCACGACCTGGC-GC ACTG GCAGCGCGGTAGCGCCAGC CAGCTGACCGATCGT Pput_1877 2149675 - 2150829 + | mandelate racemase/muconate lactonizing protein Pput_1878 2150899 - 2152509 + | extracellular solute-binding protein Pput_1879 2152554 - 2153591 + | binding-protein-dependent transport systems inner membrane component Pput_1880 2153640 - 2155250 + | extracellular solute-binding protein Pput_1881 2155312 - 2156226 + | binding-protein-dependent transport systems inner membrane component Pput_1882 2156238 - 2157077 + | ABC transporter related Pput_1883 2157089 - 2157865 + | ABC transporter related Pput_1884 2157894 - 2159714 + | glycoside hydrolase family protein TERM 1855 2159723 - 2159756 + T 81 -14 -3.16564 | gap 1, opp_overlap 2159717 2159718, overlap 2159725 GCTGTAGAATGCCTG TAGCCGT-TGCGCCT CACGC AGGCGCATACGGCTG TTGCTCAGGTGCAGG Pput_1885 2160445 - 2159699 - | GntR domain-containing protein TERM 1856 2159725 - 2159754 + g 80 -14.4 -3.14602 | gap 1, opp_overlap 2159717 2159718, overlap 2159723 TGTAGAATGCCTGTA GCCGT-TGCGCCT CACGC AGGCGCATACGGC TGTTGCTCAGGTGCA Pput_1886 2160542 - 2161270 + | GntR domain-containing protein Pput_1887 2161782 - 2161444 - | xanthine and Co dehydrogenase maturation factor Pput_1888 2161923 - 2162561 + | TetR family transcriptional regulator Pput_1889 2166128 - 2162565 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 1857 2163174 - 2163194 + g 74 -2.6 -4.83169 | gap 2, opp_overlap 2163183, overlap 2163178 ATCGACCATGCCGCC GGCAAGGTAG CTG CTACC--GCC TTTTTCTGCGCCCAT Pput_1890 2166598 - 2166125 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1858 2166791 - 2166765 - R 70 -10.1 -3.53012 | gap 1, opp_overlap 2166784, overlap 2166766 2166769 TCGGCGTCTGGGAAA TCGA-GCGCCGC CCGC GCGGCGCATCGC GCTGTGCCGAACCCC TERM 1859 2166790 - 2166766 - R 75 -13.6 -2.71712 | gap 1, opp_overlap 2166784, overlap 2166765 2166769 CGGCGTCTGGGAAAT CGA-GCGCCGC CCGC GCGGCGCATCG CGCTGTGCCGAACCC TERM 1860 2166786 - 2166769 - R 78 -14.1 -2.64155 | opp_overlap 2166784, overlap 2166766 2166765 CGTCTGGGAAATCGA GCGCCGC CCGC GCGGCGC ATCGCGCTGTGCCGA Pput_1891 2167512 - 2167036 - | MarR family transcriptional regulator Pput_1892 2168635 - 2167583 - | hypothetical protein TERM 1861 2168082 - 2168057 - G 84 -11.1 -4.20368 | gap 1 CCAGGTGAACAGAAA GCCGCTGGG-CC AGT GGTCCCAGCGCC CCGGTTCGTCGGCAT TERM 1862 2168668 - 2168689 + H 70 -10.9 -3.2794 | gap 1 GCGTTGACAGGGGGC GCACCATGGC AGT GCC-TGGTGC TTCATCTCGGTGCAA Pput_1893 2168958 - 2170106 + | monooxygenase, FAD-binding Pput_1894 2170103 - 2170909 + | alpha/beta hydrolase fold Pput_1895 2170923 - 2171675 + | Asp/Glu racemase TERM 1863 2171830 - 2171803 - g 74 -14.8 -2.62983 | TGCAGGGCTACACCA CCCCGGGCGCAC CGCT GTACGCCCCGGG CGTGGTCGCAGCGGT Pput_1896 2171691 - 2172332 + | isochorismatase hydrolase Pput_1897 2172388 - 2173854 + | major facilitator transporter TERM 1864 2173911 - 2173875 - f 74 -12.2 -3.05596 | gap 1, opp_overlap 2173877 CAGCGCTTCACGCAA CGGCAGGGCAGGCGGGC CGGG GCCCGCCTG-CCGACCT CTCTCGATGCAACCC TERM 1865 2173877 - 2173910 + F 77 -13.7 -2.91264 | opp_overlap 2173875 GCGCTTCACGCAACG GCAGGGCAGGCGGGC CGGG GCCCGCCTGCCGACC TCTCTCGATGCAACC TERM 1866 2173920 - 2173965 + F 70 -11.2 -3.02511 | gap 2, opp_overlap 2173924, overlap 2173924 CCGACCTCTCTCGAT GCAACCCGCACGCCGGTGGC CATGCAGT GCCGCCG-CGC-CGGGTTGC TGTTGCCCAAATCCA Pput_1898 2173993 - 2175285 + | outer membrane porin Pput_1899 2176095 - 2176178 + | hypothetical protein Pput_1900 2177395 - 2176490 - | LysR family transcriptional regulator TERM 1867 2176758 - 2176738 - G 73 -12.5 -3.18274 | opp_overlap 2176735 CTGAGCCCAAGCGAA GCCTGGGCC TGG GGCGCAGGC TGGTGATCTGGTCAT TERM 1868 2177724 - 2177736 + G 76 -9.1 -4.04149 | GTTGATCGTACCGGC GGCAC TCA GTGCC TTTGTCATGTCGTTC Pput_1901 2177425 - 2178255 + | hypothetical protein Pput_1902 2179666 - 2178257 - | diguanylate cyclase Pput_1903 2181648 - 2179819 - | citrate transporter TERM 1869 2181761 - 2181745 - R 100 -15.1 -5.06414 | GTGCTGCAACAAAAA GGGCCGC TAT GCGGCCC TCCGGTCACGGGGTC Pput_1904 2182167 - 2181775 - | 17 kDa surface antigen Pput_1905 2182561 - 2182241 - | hypothetical protein Pput_1906 2182906 - 2182616 - | hypothetical protein Pput_1907 2183024 - 2183374 + | hypothetical protein Pput_1908 2183544 - 2184365 + | methyltransferase type 12 Pput_1909 2185133 - 2184366 - | short chain dehydrogenase TERM 1870 2185103 - 2185092 - G 74 -5.8 -4.41348 | GGCGCCGGAAACAAA GGCA ATCT TGCC GTCGAGGTCGAACAG TERM 1871 2185190 - 2185204 + r 73 -8.6 -4.15044 | opp_overlap 2185190 GGCTGGACTTGGAAA TGACCT GCA AGGTCA TTTGTTCCAGCAAGC Pput_1910 2186237 - 2185170 - | aminoglycoside phosphotransferase TERM 1872 2186373 - 2186392 + r 100 -13.6 -4.68593 | opp_overlap 2186373 GCAGGGCAAAAAAAA CCGAAGCC GTCA GGCTTCGG TTTTTCGATCATCCG TERM 1873 2186392 - 2186373 - R 100 -13.6 -5.78622 | opp_overlap 2186373 GCAGGGCAAAAAAAA CCGAAGCC GTCA GGCTTCGG TTTTTCGATCATCCG Pput_1911 2186738 - 2186421 - | sterol-binding domain-containing protein TERM 1874 2186819 - 2186788 - R 73 -8.8 -3.8969 | gap 1, overlap 2186785 2186812 GCAGGGACACAACAA GCCGG-GCTTATC GGTAAGT GACAAGCTCCGGC ACCCTCAACAGCTGC Pput_1912 2187661 - 2186795 - | phosphoglycerate mutase TERM 1875 2187637 - 2187604 - G 91 -16.1 -3.5394 | gap 1, opp_overlap 2187606 AAAGGTTGTTTGAAA GGTGCTGCCAG-CGTT TAC ACCGGCTGGCAGCACC ACAGACGCAACGGTA Pput_1913 2187703 - 2188722 + | putative periplasmic protease TERM 1876 2188986 - 2188961 - T 74 -10.4 -3.62096 | opp_overlap 2188962, overlap 2188962 CTCCACCATTCGAAA GCCCCGCAGA TTAACG TCTGCGGGGT TTTTCTTTGTGCGCC TERM 1877 2188962 - 2188985 + T 100 -14.6 -5.38054 | opp_overlap 2188962 2188961 TCCACCATTCGAAAG CCCCGCAGAT TAAC GTCTGCGGGG TTTTTCTTTGTGCGC TERM 1878 2188985 - 2188962 - T 76 -13.9 -2.77043 | opp_overlap 2188962, overlap 2188961 TCCACCATTCGAAAG CCCCGCAGA TTAACG TCTGCGGGG TTTTTCTTTGTGCGC TERM 1879 2189211 - 2189222 + T 82 -5.8 -4.87786 | TGGGCGATTCGGTTG GCCA GGTC TGGC TTTTTCTCGACTTCA TERM 1880 2190023 - 2190053 + T 86 -11 -4.1899 | opp_overlap 2189987 GTCCTTGGTGGTAAC CGTCGGCGCCGGGG CGT CGCAGGCGCTGATG TTTTCCGTGCCGTAG TERM 1881 2191585 - 2191563 - T 70 -11.2 -3.04144 | GGCCCATCTCCAACA CGGTACCGGC GCC GCCGCCACCG CAGAAGAAGTCCACC TERM 1882 2193058 - 2193079 + T 77 -11.5 -3.60151 | GTCCTTGCGTGCAGG CGCCGCCCT CGCC GGGGTGGCG TTATCGTTTAAGAAG Pput_1917 2193720 - 2193244 - | hypothetical protein Pput_1918 2194790 - 2194395 - | hypothetical protein Pput_1919 2195721 - 2195197 - | hypothetical protein Pput_1920 2196061 - 2195696 - | hypothetical protein Pput_1921 2196685 - 2196143 - | hypothetical protein TERM 1883 2196665 - 2196644 - G 84 -13.7 -3.727 | opp_overlap 2196657 2196658, overlap 2196647 GCCACCAGAGGCAAA GAAGGCCGC TTTG GCGGCCTCC AGGTCGATTGATGGG TERM 1884 2196662 - 2196647 - G 83 -11.8 -3.99315 | opp_overlap 2196657 2196658, overlap 2196644 ACCAGAGGCAAAGAA GGCCGC TTTG GCGGCC TCCAGGTCGATTGAT Pput_1922 2197449 - 2196682 - | hypothetical protein Pput_1923 2198060 - 2197446 - | ERF family protein TERM 1885 2199461 - 2199492 + G 79 -11.4 -3.85817 | GAGTTGTCAGCTTAT GCTGGCCTGACCGG AAAA CCCGCCAGGCCTGC TTTATCCCAGAACCT Pput_1926 2199065 - 2199829 + | hypothetical protein TERM 1886 2200221 - 2200254 + F 80 -11.7 -3.72893 | gap 1, overlap 2200222 ATTGCCTTGACCACG ACCGTCACGACC-GCC AGA GGCTGGTCGTGAGGGG TTTCGTGAGCCAATA TERM 1887 2200222 - 2200253 + F 81 -15.2 -2.83522 | gap 1, overlap 2200221 TTGCCTTGACCACGA CCGTCACGACC-GCC AGA GGCTGGTCGTGAGGG GTTTCGTGAGCCAAT Pput_1927 2200357 - 2200875 + | isochorismatase hydrolase TERM 1888 2200927 - 2200950 + F 100 -14.6 -4.61868 | TCCACCATTCGAACG CCCCGCAGAT TAAC GTCTGCGGGG TTTTCTGTATGGGTC Pput_1928 2201600 - 2201899 + | hypothetical protein Pput_1929 2203124 - 2202027 - | hypothetical protein Pput_1930 2203197 - 2203568 + | MerR family transcriptional regulator TERM 1889 2204098 - 2204070 - T 83 -15.3 -3.17901 | overlap 2204058 2204056 AGATGCTGAAGGCAA CGGCTGCAGGCAA GGC CTGCCTCCAGCCG TCAGATACAGAGCTT Pput_1931 2204319 - 2204113 - | hypothetical protein TERM 1890 2204353 - 2204376 + r 89 -12.5 -3.889 | opp_overlap 2204353 TTGAGAAGGCAAAAA GCCCGTAGA GGGTCA TCTACGGGC TTTGCTGTGGTTCCA TERM 1891 2204376 - 2204353 - R 100 -12.5 -4.78149 | opp_overlap 2204353 TTGAGAAGGCAAAAA GCCCGTAGA GGGTCA TCTACGGGC TTTGCTGTGGTTCCA Pput_1932 2205421 - 2204411 - | alcohol dehydrogenase TERM 1892 2205600 - 2205577 - H 100 -13.8 -5.42198 | GCGGAAAAAAGAAAA GCCCGCGGCA AGGA TGCGGCGGGC TGCAAGAACATACGG TERM 1893 2205732 - 2205713 - H 100 -12.1 -5.252 | CAGGGTCATAAAAAA GCCCGCC ATGGAA GGCGGGC AAAAGACGTTTGAAG Pput_1933 2205857 - 2206051 + | hypothetical protein Pput_1934 2206520 - 2206053 - | DoxX family protein TERM 1894 2206240 - 2206230 - G 76 -8.2 -4.19624 | CAGCGCGAATAGAAA GGCC AGC GGCC GCGTGTAGAAACCGA TERM 1895 2206540 - 2206556 + H 81 -10.8 -4.0896 | opp_overlap 2206540 GCCAGGCAGCAAAAA GGCGCC GCAGG GGCGCC TTTTCAACGAAGTTT TERM 1896 2206556 - 2206540 - H 95 -10.8 -4.7497 | opp_overlap 2206540 GCCAGGCAGCAAAAA GGCGCC GCAGG GGCGCC TTTTCAACGAAGTTT Pput_1935 2207123 - 2208283 + | PAS/PAC sensor signal transduction histidine kinase TERM 1897 2209368 - 2209410 + G 100 -15.7 -4.57073 | gap 1 GATCGACAGCCTTGG CGCATTCAGCCGCCT-GGCT ATTG ACCCGACGCGGCTGAATGCG TTTTTCCGCGCGCTG Pput_1936 2208289 - 2209734 + | non-specific serine/threonine protein kinase Pput_1937 2209746 - 2210099 + | response regulator receiver protein Pput_1938 2210336 - 2210139 - | carbon storage regulator, CsrA Pput_1939 2211612 - 2210590 - | DNA topoisomerase TERM 1898 2210738 - 2210756 + g 71 -13.1 -3.01712 | GGGTGGATGTAGCAG CGCCGGC ACACG GCCGGCG TATTGCCCAGGCGCG Pput_1940 2212761 - 2211670 - | molybdate ABC transporter, ATPase subunit TERM 1899 2212306 - 2212294 - G 71 -9.1 -3.71848 | overlap 2212291 2212296 2212297 CTCGTCCATCAACAA CAGCC GCG GGCTG CTGAGCAGGGCGCGG TERM 1900 2212385 - 2212328 - G 75 -13.4 -3.01791 | gap 2 AGGGCGCGGGCAATA CCCACCCGCTGCGCCTCGCCCCCCGACA GGGT TGCCGGGCGGCG-GTC-CAGCAAGTGGC CGATACCCAGCAGTT Pput_1941 2213443 - 2212763 - | molybdate ABC transporter, inner membrane subunit Pput_1942 2214201 - 2213443 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1901 2214025 - 2214057 + g 72 -4 -4.60889 | overlap 2214017 2214027 GAACTGCCCGGTGGC GCCATAGGCCGCGA CCAGT TTGTGGCCGGTGTC TTTTTCGAAGTCCTT Pput_1943 2215369 - 2214284 - | 2-nitropropane dioxygenase, NPD TERM 1902 2215041 - 2215066 + g 89 -17.6 -3.14468 | opp_overlap 2215021 CGGTTGGACACCGGC GTGGGCGCCG CGAAGT CGGCGCCCAC TTCGCTGTAATAAGG Pput_1944 2215592 - 2215422 - | hypothetical protein Pput_1945 2215902 - 2215600 - | hypothetical protein Pput_1946 2216062 - 2216421 + | hypothetical protein Pput_1947 2216499 - 2217149 + | cytochrome c, class I TERM 1903 2217488 - 2217478 - g 83 -5.4 -5.08601 | overlap 2217479 CTATCGCAAGAAAAA TGAC AAG GTCA ACACCTTCGCCGAGC Pput_1948 2217146 - 2218060 + | cytochrome c, class I TERM 1904 2218062 - 2218120 + F 100 -20.3 -2.9621 | gap 1, opp_overlap 2218102 2218104 2218105, overlap 2218064 2218064 GAACGGGTAGCTGAG GTCAGCCAGTGGCGGTCTCTTC-GCGGG TGAG CCCGTAGAAGAGGCCGCCACCGGCACGC TGATTTCCCTGTCAT TERM 1905 2218558 - 2218546 - g 75 -3.4 -4.93968 | opp_overlap 2218532 2218530, overlap 2218540 ACCGACAAGGAAAAA TACC TGGTC GGTA TTCGTCGTCTGCTCA Pput_1949 2218297 - 2219136 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1906 2219157 - 2219174 + F 100 -9.1 -5.63517 | opp_overlap 2219157, overlap 2219147 CCTGCTGGCCTCAAA GCCATCC TTCG GGGTGGC TTTTTTGTTTGCGGC TERM 1907 2219285 - 2219295 + G 79 -8.2 -4.27192 | overlap 2219284 GGGTCCGGTGGTGTG CGCG CAG CGCG TTTTGCTGCCGGTTT Pput_1950 2219234 - 2220589 + | glutathione reductase Pput_1951 2222031 - 2220724 - | OmpA/MotB domain-containing protein Pput_1952 2223335 - 2222187 - | ABC transporter related Pput_1953 2224159 - 2223353 - | binding-protein-dependent transport systems inner membrane component TERM 1908 2224011 - 2223983 - G 77 -3.7 -4.82901 | overlap 2223985 CGGGTTGGAGAAAAA CTGGCCGTACC ACTTGAA GGTCCAGCCCG GTGGCGGGAACACCA Pput_1954 2225083 - 2224166 - | binding-protein-dependent transport systems inner membrane component Pput_1955 2226105 - 2225080 - | extracellular solute-binding protein Pput_1956 2227557 - 2226436 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 1909 2227446 - 2227471 + g 76 -8.9 -4.12188 | overlap 2227450 GGGCGTCGCAGCGCT CGGCGGCGATC AACA GGTCGCCTTCG TTTTCCCGGTCCTCG TERM 1910 2227701 - 2227737 + G 80 -14.3 -3.14931 | opp_overlap 2227695 CCAGCAATACACCCA GCGCGCCCCGGCTGCCT TCA AGGCATTCGGCGGGCGC TTCCTGGCCCGTGGC Pput_1957 2227636 - 2227929 + | hypothetical protein TERM 1911 2227960 - 2228018 + T 100 -29.3 -3.53012 | gap 1, opp_overlap 2227973, overlap 2227960 CCTTTCGCGGGTAAC -CCGCTCCTACACAGGCCACCACAGA ATTTGACG TTTGTGGTGGCCTGTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 1912 2227960 - 2228017 + T 100 -35.3 -2.71712 | opp_overlap 2227973, overlap 2227960 CCTTTCGCGGGTAAC CCGCTCCTACACAGGCCACCACAGA ATTTGACG TTTGTGGTGGCCTGTGTAGGAGCGG GTTTACCCGCGAAAG TERM 1913 2228125 - 2228096 - T 100 -16.5 -3.81488 | opp_overlap 2228096 2228100 2228102, overlap 2228102 TTTCCGCAAATAGAA GCAAAAGACCCGC CCAG GCGGGTCTATTGC TCATTGCCTCACTGC TERM 1914 2228096 - 2228125 + T 86 -16.5 -2.75712 | opp_overlap 2228096 2228102, overlap 2228100 2228102 TTTCCGCAAATAGAA GCAAAAGACCCGC CCAG GCGGGTCTATTGC TCATTGCCTCACTGC TERM 1915 2228119 - 2228102 - T 95 -12.7 -4.58724 | opp_overlap 2228100 2228096 2228102, overlap 2228096 CAAATAGAAGCAAAA GACCCGC CCAG GCGGGTC TATTGCTCATTGCCT TERM 1916 2228102 - 2228119 + T 75 -12.7 -3.20494 | opp_overlap 2228102 2228096, overlap 2228100 2228096 CAAATAGAAGCAAAA GACCCGC CCAG GCGGGTC TATTGCTCATTGCCT Pput_1958 2229153 - 2228134 - | alpha/beta hydrolase domain-containing protein TERM 1917 2228384 - 2228410 + g 73 -10.9 -3.6502 | gap 1, overlap 2228404 GCGGACGCCCGCAGC GGCG-AGGCGTA GATC TGCGCCTGCGCC TTTGCATCAACGGTG TERM 1918 2230111 - 2230144 + G 91 -9.4 -4.43189 | overlap 2230113 TTTCGGCGGTGTATC CGCAGCACCGGCAG GTGGCG CGGCCGGTGCAGGG TTTTGTCAGCTTCCT Pput_1959 2229243 - 2230184 + | LysR family transcriptional regulator Pput_1960 2230211 - 2230612 + | hypothetical protein Pput_1961 2230747 - 2230968 + | MbtH domain-containing protein Pput_1962 2230965 - 2231684 + | thioesterase TERM 1919 2231927 - 2231907 - g 70 -10.3 -3.62572 | GAGCAGTACCCCAAA GGCCTGGGC CAT ACCCTGGCC GAACTGCTGGCCGCA Pput_1963 2231742 - 2232293 + | isochorismatase hydrolase Pput_1964 2232320 - 2233372 + | hypothetical protein TERM 1920 2233573 - 2233535 - T 72 -13.1 -2.52464 | gap 1, opp_overlap 2233565, overlap 2233484 2233557 CGCGTGTCCAATGTA GGAGCGGGCTT-GCCCGC GAAC ACGGGCGAAGCCCGTGCC ATCCACCGCGCGGGC Pput_1965 2234460 - 2233597 - | hypothetical protein Pput_1966 2235356 - 2234457 - | ABC-3 protein Pput_1967 2236102 - 2235356 - | ABC transporter related Pput_1968 2237001 - 2236099 - | periplasmic solute binding protein Pput_1969 2237587 - 2237018 - | hypothetical protein TERM 1921 2237318 - 2237342 + g 78 -6.3 -4.63218 | overlap 2237302 2237319 GCCTTCTTCGACCAG GGCCTTTACGC TGG GCGTGACGGCG TTTTCTTCGCGCAGG Pput_1970 2237904 - 2237584 - | hypothetical protein Pput_1971 2238440 - 2237901 - | hypothetical protein TERM 1922 2238090 - 2238106 + g 71 -9.3 -3.73068 | opp_overlap 2238088 2238087 GCCGAAGAAAATGGT GCCGGCG GCG CGCAGGC TTCTTGGCTTGCCGA Pput_1972 2239630 - 2238437 - | peptidase TERM 1923 2239781 - 2239754 - R 74 -10.6 -3.66216 | gap 1, opp_overlap 2239753 2239778, overlap 2239752 TTCAAAGCACAAACA CCGGACTGCGCAC GAG GCAC-CAGTCCGG CCTTGATGGCTGGTT Pput_1973 2241142 - 2239808 - | lysine/ornithine N-monooxygenase-like protein Pput_1974 2241317 - 2241763 + | hypothetical protein TERM 1924 2242193 - 2242174 - T 71 -9.2 -3.73224 | opp_overlap 2242163 2242186 2242190 GCACGCGCCAGGAAA TGGCGGTC ATTC GGCCGCCA ACCGCCCCTTGTTCT pbpG 2243106 - 2242180 - | D-alanyl-D-alanine endopeptidase TERM 1925 2242239 - 2242262 + g 86 -15.3 -3.55622 | ACTGCATGGCCACTG CCGGTGCCG GCTTGG CGGCACCGG TTTCCAGCCATTGAC Pput_1978 2243393 - 2244109 + | phage integrase family protein Pput_1979 2245156 - 2244200 - | LysR family transcriptional regulator Pput_1980 2245198 - 2245629 + | glutathione-dependent formaldehyde-activating, GFA TERM 1926 2245769 - 2245744 - f 78 -13.4 -3.07816 | opp_overlap 2245727, overlap 2245746 CCGCTATCGACCCAA TAGCTGCCCT TGGCGG AGGGCAGCTA ACGGCCAATAGCGGC TERM 1927 2245767 - 2245746 - f 71 -11.6 -3.09878 | opp_overlap 2245727, overlap 2245744 GCTATCGACCCAATA GCTGCCCT TGGCGG AGGGCAGC TAACGGCCAATAGCG Pput_1981 2246162 - 2247145 + | luciferase family protein Pput_1983 2247863 - 2247561 - | hypothetical protein Pput_1984 2249192 - 2248092 - | low temperature requirement A TERM 1928 2248464 - 2248453 - G 75 -3 -4.90266 | TTCAGCAAGTAAAAA CTAT CAAA ATAG ATCCACCAGATACTG Pput_1985 2249830 - 2249291 - | DSBA oxidoreductase Pput_1986 2250384 - 2249842 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1929 2250308 - 2250350 + g 84 -2.4 -5.28778 | opp_overlap 2250298, overlap 2250309 2250312 GTGAAGTCGGGCGCG ACAGTGCCGGCCGGCAGCGG CCC CTGAACCCGGTCGCCATTGG TTTTTTGTGCATCAT TERM 1930 2250493 - 2250482 - R 82 -2.2 -5.40474 | AGGGGTTCAAAAAAA GACA ACGC TGCC TCGATCTCAGCCTGA TERM 1931 2251121 - 2251109 - R 74 -4.8 -4.68994 | opp_overlap 2251080 AGCAGCAGTCAAAAA TGCG GCTCG CGCA GCGATGGTGCTGTAC TERM 1932 2251200 - 2251257 + r 100 -22.9 -2.80816 | overlap 2251210 2251218 2251219 GCGAATATTGTCACT GACCGCTTTTGGCCGGTAGCTGCCTTT CGCG AAGGGCAGCTATGGGTCGAAAGCGGCC TGTCGTGAATCGCAG Pput_1987 2252460 - 2251294 - | GntR family transcriptional regulator Pput_1988 2252541 - 2252984 + | MarR family transcriptional regulator TERM 1933 2253169 - 2253183 + T 71 -4.2 -4.63218 | opp_overlap 2253166 GCTGTCTAAAACCGC CCGAAA GCG TCTCGG TTTTATTGGGCCAAA TERM 1934 2253787 - 2253769 - T 77 -11.7 -3.68988 | opp_overlap 2253769 GCCCAGCTAATAGAA GCCCAGC CCCGC GCTGGGC TTTTTGCATTCATGA TERM 1935 2253769 - 2253787 + T 100 -11.7 -4.7629 | opp_overlap 2253769 GCCCAGCTAATAGAA GCCCAGC CCCGC GCTGGGC TTTTTGCATTCATGA Pput_1989 2254519 - 2253845 - | alginate lyase 2 TERM 1936 2254280 - 2254301 + g 70 -12.3 -3.24118 | overlap 2254278 2254273 GCGATTCCAGTGATC CTGGGCGCT GGCC AGCGTCCAG TCTTGCGTTTCTGTC Pput_1990 2254754 - 2255077 + | hypothetical protein TERM 1937 2255085 - 2255114 + T 73 -9.2 -3.86897 | opp_overlap 2255090, overlap 2255090 CGTTCTGAGCTTCAG CAAAAGCCCGCC GGTCAG GGCGGGCTTCGG TTTATACAAGGTGGG TERM 1938 2255090 - 2255109 + T 77 -12.1 -3.32997 | opp_overlap 2255090, overlap 2255085 TGAGCTTCAGCAAAA GCCCGCC GGTCAG GGCGGGC TTCGGTTTATACAAG TERM 1939 2255109 - 2255090 - T 90 -12.1 -4.26076 | opp_overlap 2255085 2255090 TGAGCTTCAGCAAAA GCCCGCC GGTCAG GGCGGGC TTCGGTTTATACAAG Pput_1991 2255985 - 2255116 - | putative phage repressor Pput_1992 2256105 - 2256419 + | hypothetical protein TERM 1940 2256471 - 2256453 - T 100 -16 -5.7946 | CCGTGAAGAAAAAAA GCCCGCCA AAT TGGCGGGC GACAAGGGCGTAGGG Pput_1993 2256691 - 2256509 - | hypothetical protein Pput_1994 2257139 - 2256786 - | hypothetical protein Pput_1995 2257301 - 2258122 + | shikimate 5-dehydrogenase TERM 1941 2258165 - 2258127 - T 81 -14.7 -3.07816 | gap 1 GGGCTAGCTAGTTAA TGCTACCCCCTTCACAGC TTCG GCGGCGAAGGGGGTA-CA GGCGAAACCCGGATC Pput_1996 2258421 - 2258179 - | hypothetical protein TERM 1942 2258495 - 2258475 - R 70 -10.4 -3.31983 | gap 1, overlap 2258469 2258477 CATATACCACAGCAA GAGGCCGGG AGTT CCCGGCC-C GACGAGCGCGCCGCG TERM 1943 2258494 - 2258477 - R 83 -14.1 -3.22114 | overlap 2258469 2258475 TATACCACAGCAAGA GGCCGGG AGTT CCCGGCC CGACGAGCGCGCCGC Pput_1997 2259046 - 2258519 - | lactoylglutathione lyase TERM 1944 2259158 - 2259137 - R 100 -17.3 -4.06055 | overlap 2259150 ATTGCGCAAATGAAA GCGCCCTGC AAAG GCAGGGCGC TGAAATTAGAGGCCC Pput_1998 2259675 - 2259271 - | hypothetical protein TERM 1945 2259708 - 2259692 - H 76 -3.5 -4.93316 | opp_overlap 2259694 2259706, overlap 2259694 GAAGAAGAGTAAAAA CGCCGGC CAC GCAGGTG GGTTCCACTGTTCGC TERM 1946 2260065 - 2260078 + G 76 -8.1 -4.15044 | GTGCCGGTGTCAACG CCCAG GCTG CTGGG TTTCTTGAAGACGGC Pput_1999 2259992 - 2261281 + | outer membrane porin Pput_2000 2261349 - 2262098 + | precorrin 6A synthase Pput_2001 2262518 - 2262168 - | response regulator receiver protein Pput_2002 2262767 - 2266234 + | multi-sensor hybrid histidine kinase Pput_2003 2266231 - 2267052 + | MCP methyltransferase, CheR-type Pput_2004 2267049 - 2267624 + | CheB methylesterase Pput_2005 2267618 - 2268844 + | response regulator receiver sensor signal transduction histidine kinase Pput_2006 2268889 - 2269266 + | response regulator receiver protein Pput_2007 2269896 - 2269315 - | TetR family transcriptional regulator Pput_2008 2270757 - 2269909 - | 3-hydroxybutyryl-CoA dehydrogenase Pput_2009 2271955 - 2270771 - | beta-ketothiolase Pput_2010 2272124 - 2273212 + | helix-turn-helix domain-containing protein Pput_2011 2273928 - 2273491 - | alkylhydroperoxidase TERM 1947 2275112 - 2275084 - g 79 -9.6 -4.1964 | gap 2, opp_overlap 2275084 2275095 TGGAACACCTGAAAA CGCCTGCCGAGGCC GGC AGCCT-GGC-GGCG TTCGTACAGGGTATC Pput_2012 2274129 - 2275325 + | major facilitator transporter Pput_2013 2276814 - 2275318 - | GntR family transcriptional regulator TERM 1948 2275969 - 2275935 - G 72 -13.5 -2.70932 | CGGCGCGCGCAAGCA GGGCATGCCGGCGTG GCTCG CTCATCGGCATGCCC AGCGGGAACTGGTGC Pput_2014 2277180 - 2276842 - | hypothetical protein Pput_2015 2277718 - 2277320 - | hypothetical protein glcF 2278946 - 2277711 - | glycolate oxidase iron-sulfur subunit glcE 2280008 - 2278956 - | glycolate oxidase FAD binding subunit TERM 1949 2279126 - 2279143 + g 71 -12.7 -3.01791 | CCTGGTCGCGAATGG CCTGCGC CGGT GCGCAGG TCTTGAGCCAGCGCT Pput_2018 2281507 - 2280008 - | glycolate oxidase subunit GlcD TERM 1950 2281009 - 2281019 + g 73 -8.2 -4.08692 | ACTTGAGGCAGTGCA CGCC ACC GGCG TTTTCGGCGACGTTG TERM 1951 2281600 - 2281612 + H 71 -7.7 -4.1552 | CGAGCGAGATGTTGA CTGGT CCT ACCAG TTTCTTCGGGCAGTA Pput_2019 2281702 - 2282466 + | DNA-binding transcriptional regulator GlcC TERM 1952 2282473 - 2282521 + T 100 -33.3 -3.77196 | TGGGGGTGAAGCGGC CCTGTACCGGCCCTCTCGCGTCG AAC CGCCGCGAAAGGGCCGGTACAGG TTTACTCAATGGTCA Pput_2020 2282844 - 2282527 - | hypothetical protein Pput_2021 2283125 - 2283751 + | glutathione S-transferase domain-containing protein Pput_2022 2285797 - 2283794 - | peptidoglycan glycosyltransferase TERM 1953 2286997 - 2286963 - g 82 -14.2 -3.31144 | opp_overlap 2286931 2286949, overlap 2286986 GCCGCACGGGCAGAA GGTGCCAGCAGCGGTT TCA AGCAGCTGCTGGCGCC GGCCATGCGCCGCAC Pput_2023 2286252 - 2287592 + | major facilitator transporter TERM 1954 2287599 - 2287613 + F 75 -12.8 -2.91383 | AGCCACTGAGTGCAA CCCGGC CTG GCCGGG TATCTGAATGCAACT TERM 1955 2287631 - 2287659 + F 74 -13.1 -2.79679 | overlap 2287653 TCTGAATGCAACTTG CTGCTCCGGGTCA TGC TGGCCTGGGGCGG TCTGCTGCGCCTATT Pput_2024 2287695 - 2288948 + | outer membrane porin TERM 1956 2289458 - 2289474 + G 75 -12.3 -3.55444 | GATGGAAGTCCCAAC CGCCGAA CTG TTCGGCG TTTCACGCATGCCGG Pput_2025 2289342 - 2290076 + | GntR family transcriptional regulator Pput_2026 2291033 - 2290083 - | ferredoxin TERM 1957 2290623 - 2290596 - G 74 -9 -3.86015 | overlap 2290597 GATCCGCTCGACAAA CGCCGCCCGCTC GCTG GAGCGGGCACAG TAGTGCAGCTCGAAG Pput_2027 2292113 - 2291046 - | Rieske (2Fe-2S) domain-containing protein Pput_2028 2292395 - 2293060 + | ABC transporter related TERM 1958 2293085 - 2293112 + G 74 -14.2 -2.64091 | gap 1, overlap 2293075 TGTCGCTGGCCCTGT TGGCGCTGCTCAG CCA CTG-GCGGCGCCA TCGTGTGCAGTGCTT Pput_2029 2293060 - 2295519 + | hypothetical protein Pput_2030 2295509 - 2296564 + | secreted hydrolase-like protein Pput_2031 2297364 - 2296618 - | enoyl-CoA hydratase/isomerase Pput_2032 2297481 - 2298125 + | TetR family transcriptional regulator TERM 1959 2298208 - 2298186 - f 79 -2.6 -5.19251 | overlap 2298190 CAACACCAATAAAAA GAGACAACAC GCA ATGACGCCTC GGGTATTGATCGTCG Pput_2033 2298199 - 2298915 + | two component transcriptional regulator Pput_2034 2298912 - 2299694 + | extracellular solute-binding protein TERM 1960 2301136 - 2301148 + G 71 -4.8 -4.41494 | TGAGAGCGTTCAAGG GCAG GGCAG CTGC TTTTGGTTCGAACTC Pput_2035 2299691 - 2301943 + | multi-sensor hybrid histidine kinase Pput_2036 2302140 - 2303546 + | amino acid permease-associated region TERM 1961 2304475 - 2304429 - g 74 -12.9 -3.26471 | overlap 2304430 2304432 CTATGCGCAGACCAA GCAGCTGATCCGCGACGGCGC CCGGC GCACCCTCGCCGAGCAGCTGG AGGCCGAGCGCCACG TERM 1962 2304474 - 2304430 - g 80 -16.4 -2.55668 | overlap 2304429 2304432 TATGCGCAGACCAAG CAGCTGATCCGCGACGGCGC CCGGC GCACCCTCGCCGAGCAGCTG GAGGCCGAGCGCCAC Pput_2037 2303785 - 2304579 + | enoyl-CoA hydratase/isomerase Pput_2038 2304613 - 2305773 + | acyl-CoA dehydrogenase domain-containing protein Pput_2039 2305791 - 2307908 + | CoA-binding domain-containing protein Pput_2040 2307901 - 2309508 + | hypothetical protein TERM 1963 2310722 - 2310706 - g 71 -9.3 -3.69809 | opp_overlap 2310705, overlap 2310703 2310702 GATGGAAGAAATCAA CGGCGCG TTG CTCGCCG ATCTGTACACCGTAT alr 2309543 - 2310772 + | alanine racemase Pput_2042 2310797 - 2311987 + | aminotransferase, class I and II Pput_2043 2311980 - 2313392 + | aldehyde dehydrogenase Pput_2044 2313430 - 2314137 + | ribosyldihydronicotinamide dehydrogenase (quinone) TERM 1964 2314161 - 2314177 + F 88 -15.1 -3.53012 | opp_overlap 2314158 2314156 CTGTACTGAACACTG GGGCCGC GTT GCGGCCC TTTCGCGACACAAGG TERM 1965 2314520 - 2314504 - f 82 -13.7 -3.53012 | opp_overlap 2314500 2314499 CCTTGTGTCGCGAAA GGGCTGC AAA GCAGCCC CAACATTTTGTCAGC Pput_2045 2314674 - 2315777 + | extracellular solute-binding protein Pput_2046 2315812 - 2317224 + | hypothetical protein Pput_2047 2317221 - 2318126 + | LuxR family transcriptional regulator TERM 1966 2319209 - 2319245 + G 71 -13.7 -2.68034 | overlap 2319208 2319206 GTCTGGTGTCGGTGC GGCCGGGGTATTGGCGG CCT CGGCGAATATCCTGGCC ATGTTTCGCTTGGTC Pput_2048 2318280 - 2319512 + | ethanolamine utilisation protein, EutH TERM 1967 2319527 - 2319565 + F 100 -18.2 -4.58395 | overlap 2319534 AGCAAAAGCGTCATG CGCATGATCCGGAGCGTC CTG GGCGCTCCGGATTTTGTG TTTTTAACCGATCAA TERM 1968 2319534 - 2319558 + F 100 -17.9 -4.98672 | overlap 2319527 GCGTCATGCGCATGA TCCGGAGCGTC CTG GGCGCTCCGGA TTTTGTGTTTTTAAC Pput_2049 2319628 - 2320425 + | response regulator receiver protein TERM 1969 2320456 - 2320430 - T 100 -22.4 -2.88579 | opp_overlap 2320430 2320434, overlap 2320434 2320446 CCAAGGGCTGATACA GCAAGGGGCTGC AAA GCAGCCCCTTGC TGTATCAGGTACAGG TERM 1970 2320430 - 2320456 + T 100 -22.4 -2.89564 | opp_overlap 2320430 2320434 2320446, overlap 2320434 CCAAGGGCTGATACA GCAAGGGGCTGC AAA GCAGCCCCTTGC TGTATCAGGTACAGG TERM 1971 2320434 - 2320452 + T 87 -16 -3.32498 | opp_overlap 2320434 2320430 2320446, overlap 2320430 GGGCTGATACAGCAA GGGGCTGC AAA GCAGCCCC TTGCTGTATCAGGTA TERM 1972 2320452 - 2320434 - T 87 -16 -3.32022 | opp_overlap 2320430 2320434, overlap 2320430 2320446 GGGCTGATACAGCAA GGGGCTGC AAA GCAGCCCC TTGCTGTATCAGGTA Pput_2050 2321791 - 2320472 - | FAD-linked oxidoreductase Pput_2051 2322539 - 2321772 - | short-chain dehydrogenase/reductase SDR TERM 1973 2322309 - 2322324 + g 72 -11.8 -3.31443 | GAAGGCCTCTTCTAC GGCCGC CACC GCGGCC TTCACTTGTTGTGCG Pput_2052 2323687 - 2322785 - | LysR family transcriptional regulator TERM 1974 2323495 - 2323476 - G 73 -7 -4.30719 | overlap 2323478 TGTTCGTAGAAGAAA CGGCCGGC CTCG GTCAGCCG CAGCGGACGTTCGCG TERM 1975 2323781 - 2323741 - H 71 -7.6 -4.04141 | gap 1, overlap 2323745 CAACAATCAAGTAAA CGCATCA-CTCGGGCCTAC GACT GTAAGCCCGACCTGACGGG ACCTGGCAACAATGA Pput_2053 2323793 - 2324914 + | muconate and chloromuconate cycloisomerase Pput_2054 2324932 - 2325222 + | muconolactone Delta-isomerase Pput_2055 2325266 - 2326201 + | catechol 1,2-dioxygenase TERM 1976 2326228 - 2326260 + F 100 -13.4 -4.82901 | TGTCACTGTGATTTT GCCTGGGGCTTTCC GTGCG GGGAGGTCCCGGGC TTTTTGTCGCCAGGG Pput_2056 2326319 - 2326813 + | hypothetical protein TERM 1977 2326799 - 2326822 + F 72 -5.9 -4.45544 | gap 1 AATTTCCTGGTGACC GGCACCCGCC ATTGA GG-GGGCGCC TTTTCGTTGGTGCGG TERM 1978 2328742 - 2328722 - g 79 -8.9 -4.30809 | overlap 2328723 CAACAGCGAGGAAAA CGTGCGCAC CTT GCGCGCACT GAAAGACCTGGGCGT TERM 1979 2328741 - 2328723 - g 70 -12.4 -3.17762 | overlap 2328722 AACAGCGAGGAAAAC GTGCGCAC CTT GCGCGCAC TGAAAGACCTGGGCG Pput_2057 2326974 - 2329073 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Pput_2058 2329912 - 2329088 - | aldo/keto reductase TERM 1980 2330090 - 2330111 + H 77 -12.3 -3.23853 | gap 1, overlap 2330088 TCCCAGCTGTTACAT CCGC-CAGGC AAT GCCTGCGCGG TCTTCCTTGGGCGGG Pput_2059 2330100 - 2331035 + | hypothetical protein Pput_2060 2332000 - 2331095 - | LysR family transcriptional regulator TERM 1981 2333525 - 2333509 - g 71 -9.3 -3.71687 | overlap 2333503 CCAAAAGAGGGCAAA GGCGCCG GAA CGGTGCC CGATGCACACGATCC Pput_2061 2332387 - 2334642 + | catalase/peroxidase HPI TERM 1982 2334649 - 2334683 + F 82 -15.6 -2.82623 | overlap 2334647 TTGAAATAGCGTTGC CTGGCGGGGGGCGCGC TCA GCGCCCCCTTGGCCAG TGGTTATCCCGCCAA Pput_2062 2334802 - 2336013 + | creatinase TERM 1983 2337446 - 2337414 - g 73 -13.3 -3.15544 | opp_overlap 2337435 GGTGACGGGCAGCAA GCTGGCCCCGGCAGG ATA CCTGCTGGCGGCAGC GCTGGTGGCGCTGGT Pput_2063 2336176 - 2337510 + | major facilitator transporter Pput_2064 2338642 - 2337635 - | AraC family transcriptional regulator pssA 2338839 - 2340152 + | phosphatidylserine synthase TERM 1984 2340577 - 2340590 + G 93 -2.3 -5.55664 | overlap 2340578 CGCCAATGGCTTGCT GGTGG TGGC CCACG TTTTTTTCCTGATCG Pput_2066 2340272 - 2341531 + | diguanylate cyclase Pput_2067 2343025 - 2341652 - | hypothetical protein TERM 1985 2343147 - 2343205 + r 86 -17.6 -2.71712 | gap 2, opp_overlap 2343147, overlap 2343137 2343148 GCTTCGCGAGTAAAC CCGCTCCTATACAGGTACAGCGCAAGCC TTGAT GGCG-GTGCGG-ACCTGTGTAGGAGCGG GTTTACCCGCGAAGC TERM 1986 2343205 - 2343147 - R 74 -13.2 -2.83403 | gap 2, opp_overlap 2343137 2343147 2343148 GCTTCGCGAGTAAAC CCGCTCCTATACAGGTACAGCGCAAGCC TTGAT GGCG-GTGCGG-ACCTGTGTAGGAGCGG GTTTACCCGCGAAGC Pput_2068 2344300 - 2343239 - | hypothetical protein TERM 1987 2343532 - 2343486 - G 85 -10.1 -4.30014 | gap 1, overlap 2343491 GCCAGGAAGCCAAAA GCGAACCAGG-GCATGGCAATG CGCC CGTTGCCCTGCGCCTGGCCAGC CTTGCGCGAACGGCT TERM 1988 2343527 - 2343491 - G 72 -11.6 -3.39352 | gap 1, overlap 2343486 GAAGCCAAAAGCGAA CCAGG-GCATGGCAATG CGCC CGTTGCCCTGCGCCTGG CCAGCCTTGCGCGAA TERM 1989 2345188 - 2345209 + G 88 -8.7 -4.8066 | ACCGGCTGCAGGTTG CGCCGCA GGCGCTGG TGCGGCG TTTTTCCATTCTGTT TERM 1990 2345244 - 2345261 + G 73 -6.9 -4.28069 | overlap 2345245 CATGGGGCTACGCCT TCGCGGG CTGC CTCGCGG TTTCTTGAATTGTGT Pput_2069 2344413 - 2345300 + | LysR family transcriptional regulator Pput_2070 2345973 - 2345518 - | dehydratase TERM 1991 2346400 - 2346411 + G 77 -2.2 -5.00616 | GCGTTAGCGGATTTG CTCG ACGA TGAG TTTTTTGCGGCAGAC TERM 1992 2347001 - 2347028 + G 70 -10.6 -3.59979 | gap 1 GCATGTCCAGTTCCA CCCTACAGCGAAG GCT CTACGCTG-AGGG TTTCACCTACCAACG Pput_2071 2346205 - 2347230 + | helix-turn-helix domain-containing protein TERM 1993 2347682 - 2347720 + G 100 -10.5 -5.40474 | gap 2, overlap 2347687 CCAGCGCCGGGGTAA TGGCTGGCTCAGCATTGTT TGG GACAATGCTGGGC--GCCA TTTTTTTAGGCACAT TERM 1994 2348667 - 2348686 + G 76 -6.4 -4.45945 | gap 1, overlap 2348645 2348652 2348668 GGGCGTCGGTCGCGT CGGG-GCGA TTG TCGCGCCTG TTTTGATTGGTGCCT Pput_2072 2347501 - 2348853 + | major facilitator transporter Pput_2073 2348882 - 2349610 + | nitroreductase Pput_2074 2349772 - 2351034 + | outer membrane porin TERM 1995 2351043 - 2351070 + T 87 -9.8 -4.67234 | gap 1, opp_overlap 2351044, overlap 2351044 CTTCTGAATAGCGAA ATGGGCCGGC-CT TCT GGCGCCGGCCCAC TTTTTGCCATTCACT TERM 1996 2351069 - 2351044 - T 88 -13.3 -3.76373 | opp_overlap 2351043 2351044 TTCTGAATAGCGAAA TGGGCCGGC CTTCTGGC GCCGGCCCA CTTTTTGCCATTCAC TERM 1997 2351044 - 2351069 + T 82 -13.3 -3.39618 | gap 1, opp_overlap 2351044, overlap 2351043 TTCTGAATAGCGAAA TGGGCCGGC-CT TCT GGCGCCGGCCCA CTTTTTGCCATTCAC Pput_2075 2352597 - 2351185 - | permease for cytosine/purine, uracil, thiamine, allantoin TERM 1998 2352940 - 2352918 - R 75 -11.2 -3.53012 | opp_overlap 2352918 CTTTTCGCGGGTAAA CCCGCTCCTA CAG CAGGCGCGGG TTTATCCGCGAAAGG TERM 1999 2352918 - 2352940 + r 77 -10.5 -3.85698 | opp_overlap 2352918 CTTTTCGCGGGTAAA CCCGCTCCT ACAGC AGGCGCGGG TTTATCCGCGAAAGG Pput_2076 2353428 - 2352976 - | AsnC family transcriptional regulator Pput_2077 2353540 - 2354154 + | lysine exporter protein LysE/YggA Pput_2078 2354212 - 2354853 + | lysine exporter protein LysE/YggA Pput_2079 2357059 - 2354876 - | GAF sensor hybrid histidine kinase Pput_2080 2357774 - 2357211 - | NUDIX hydrolase Pput_2081 2358529 - 2357777 - | GntR family transcriptional regulator TERM 2000 2358573 - 2358587 + r 77 -11.4 -3.6608 | opp_overlap 2358564 CCAACATCGCGGAAT GCCTCG AAC CGAGGC TTTCCATGCAGTGGT TERM 2001 2358611 - 2358625 + r 75 -10 -3.73775 | opp_overlap 2358610 CAGTGGTTCGAACAG CCCGTT GTT AACGGG TTTGCTCCGCATCGG Pput_2082 2359007 - 2358618 - | carboxymuconolactone decarboxylase TERM 2002 2358949 - 2358973 + g 86 -12.1 -4.10855 | overlap 2358965 GAGCGGTTGACGTAG TCCTCGCCCAG CAC CTGGGTGCGGA TTTTCAGACCCTTTT Pput_2083 2359679 - 2359194 - | flavin reductase domain-containing protein Pput_2084 2361173 - 2359692 - | aldehyde dehydrogenase Pput_2085 2362003 - 2361170 - | alpha/beta hydrolase fold Pput_2086 2362668 - 2362072 - | hypothetical protein TERM 2003 2362902 - 2362864 - R 100 -21.7 -5.75945 | AGGTTTCAAAAAAAA GCCCGCTCACGCAGGCC GAAGG GGCCCACGGGAGCGGGC GCGTCCCGCAATGAT Pput_2087 2363973 - 2362933 - | luciferase family protein Pput_2088 2364539 - 2364054 - | flavin reductase domain-containing protein TERM 2004 2364559 - 2364574 + H 89 -8.2 -4.99861 | overlap 2364572 AGTACCTCTGAAGGG CTGCGG TGGT CCGCGG TTTTTATCGTTGATG TERM 2005 2364691 - 2364657 - H 81 -14.3 -3.14132 | opp_overlap 2364650, overlap 2364666 CGTTTTCGCGATGAA CGGCCCAAAGCCACG AAAAA CGTGGCCTTGAGCGG TGAGGCGGTTTGTCG TERM 2006 2364721 - 2364736 + H 70 -3.2 -4.72986 | gap 1 GCAGGGGTTTTGCAA GCGGATC AGT GG-CCGC TTTTTCATGCGGATC TERM 2007 2365008 - 2365030 + G 70 -12 -3.21924 | overlap 2364995 2365006 GACCGGCGCCATGGT GGTCCAGGTG TTC CACCTGAACC TGTTGTGGGGCCTGA TERM 2008 2365292 - 2365241 - g 71 -13.1 -3.01712 | gap 2 TCCTGGCGGGCAAGA CCATTCACGGCATCGCGCCGAGCGT GCCG ATGCCCGGCGCGAT-C-GTGATCGG TGCCCTGAGTGCGAC TERM 2009 2365954 - 2365970 + G 74 -9.5 -3.93695 | opp_overlap 2365962 CTGGTGCCGTGGGCT TCGATCA ACC TGATCGA TTTCTACCTGATCAA Pput_2090 2364856 - 2366262 + | permease for cytosine/purine, uracil, thiamine, allantoin TERM 2010 2366279 - 2366307 + T 100 -20.3 -4.18197 | overlap 2366281 AGACCGCTGTTGCTG TAGCCGGGGCTGC AAT GCGGCCCCGGCTG TTTTGGATCAAACCT TERM 2011 2366281 - 2366305 + T 100 -20.7 -3.69216 | overlap 2366279 ACCGCTGTTGCTGTA GCCGGGGCTGC AAT GCGGCCCCGGC TGTTTTGGATCAAAC Pput_2091 2367940 - 2366315 - | methyl-accepting chemotaxis sensory transducer TERM 2012 2368160 - 2368126 - R 100 -21 -4.1466 | opp_overlap 2368135, overlap 2368135 ATGTAACGGCCAAAA CTGACAAAACCGCCAA TTG TTGACGGTTTTGTCAG AAAAGTGCCGTTAAA TERM 2013 2368135 - 2368151 + r 74 -6.5 -4.37092 | opp_overlap 2368126 2368135 CCAAAACTGACAAAA CCGCCAA TTG TTGACGG TTTTGTCAGAAAAGT TERM 2014 2368151 - 2368135 - R 83 -8.7 -4.54477 | opp_overlap 2368135, overlap 2368126 CCAAAACTGACAAAA CCGCCAA TTG TTGACGG TTTTGTCAGAAAAGT Pput_2092 2369379 - 2368171 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pput_2093 2370232 - 2369321 - | helix-turn-helix domain-containing protein TERM 2015 2369550 - 2369540 - GH 74 -4.6 -4.58283 | GAAGCGCTTGAAAAA CGCA GAC CGCG ATAAGCCGGTGCAGG TERM 2016 2369749 - 2369767 + gH 77 -11.6 -3.62597 | opp_overlap 2369738, overlap 2369750 GCAACGCCTGCGACG GGCCGGCG GCC CGCCGGCA TTCTTCCAGAATGAG TERM 2017 2369750 - 2369766 + gH 81 -15.1 -2.77344 | opp_overlap 2369738, overlap 2369749 CAACGCCTGCGACGG GCCGGCG GCC CGCCGGC ATTCTTCCAGAATGA TERM 2018 2369951 - 2369902 - GH 84 -13.6 -3.64049 | gap 1, opp_overlap 2369907 2369912, overlap 2369894 GGAAGAAGCCGCAAA CCAGCCCGACGCCGTCGCTGGCT TCGCT ATCCAGCGACTGCAT-GGCCTGG CGCGGTTGGGCACAG TERM 2019 2370381 - 2370391 + G 76 -8.2 -4.15044 | AGAGCGCCCCGGAAG CGGC ACG GCCG TTTCTTGAGAACGCG Pput_2094 2370335 - 2370895 + | alkylhydroperoxidase TERM 2020 2371476 - 2371488 + G 78 -10.5 -3.96892 | opp_overlap 2371475 2371474 CATCGAGGATGAAGC CGGCG GCG CGCCG TTTGTGCTGGCCATT Pput_2095 2370994 - 2372058 + | Acyl-CoA dehydrogenase-like protein Pput_2096 2372055 - 2372876 + | ABC transporter related Pput_2097 2372863 - 2374068 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Pput_2098 2374068 - 2374823 + | binding-protein-dependent transport systems inner membrane component Pput_2099 2375621 - 2374935 - | GCN5-related N-acetyltransferase TERM 2021 2375674 - 2375645 - R 70 -10.1 -3.40403 | gap 1, opp_overlap 2375635, overlap 2375650 TCCGGCGGATGAGAA TACGACCCGCGC TGTGTTG GCGCGGGT-GTA CAGTCTAACCGGTTT Pput_2100 2376638 - 2375697 - | N-acetyl-gamma-glutamyl-phosphate reductase Pput_2101 2376795 - 2377673 + | LysR family transcriptional regulator Pput_2102 2378390 - 2377740 - | SH3 type 3 domain-containing protein TERM 2022 2377904 - 2377932 + g 81 -13.1 -3.68569 | overlap 2377870 CGCGCAGGTCCGACT GGCTCTGATCGAG CTG CTCGTTCAGTGCC TTGTTGCGTGCCTCC TERM 2023 2378442 - 2378420 - H 74 -3.2 -5.00846 | opp_overlap 2378438, overlap 2378421 2378423 GAAACAGGACAAAAA GTAGGCCCGG TGA CTGGGCCGAT GAACCGGTCGGTTAG TERM 2024 2378447 - 2378478 + H 88 -3 -5.60993 | gap 1, overlap 2378438 ACTGGGCCGATGAAC CGGTCGGTTAGTTGA CCG TCAGCGAAA-GACCG TTTTTTTGTCAGCAG TERM 2025 2378982 - 2379005 + G 74 -9.4 -3.93658 | CAAGCTCGACACGGG CGGCGGCCGC AACG GCGGGCGCAG TTCTTTCGACGTATT Pput_2103 2378662 - 2380005 + | outer membrane porin TERM 2026 2380054 - 2380071 + F 100 -10.5 -5.63504 | TGGGTGGATTTTCTG GCGCTCC GCTT GGGGCGC TTTTTTTATCGACTT Pput_2104 2380191 - 2380670 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2027 2380709 - 2380733 + T 79 -9.9 -4.11216 | overlap 2380712 GCGGCCTCGAATCGC GAACGGGCTGC GTG GCAGCCCGTGG TTTTCGGGGTGACGC TERM 2028 2380712 - 2380730 + T 85 -16 -3.09004 | overlap 2380709 GCCTCGAATCGCGAA CGGGCTGC GTG GCAGCCCG TGGTTTTCGGGGTGA Pput_2105 2382496 - 2380751 - | choline/carnitine/betaine transporter Pput_2106 2382812 - 2383129 + | hypothetical protein Pput_2107 2383138 - 2383338 + | hypothetical protein TERM 2029 2383966 - 2383978 + G 76 -9.1 -4.02132 | CTGGGTGAACCGGGT GGTGG GCA CCACC TTTATCGGTTTCGGC Pput_2108 2383388 - 2384029 + | lysine exporter protein LysE/YggA TERM 2030 2384069 - 2384084 + F 73 -5.4 -4.62069 | TGCAGGCCCTTACTG TCTGTC CTTC GGCAGA TTTTTCAACTGGACG Pput_2109 2384238 - 2385026 + | extracellular solute-binding protein Pput_2110 2386439 - 2385096 - | gluconate 2-dehydrogenase acceptor subunit TERM 2031 2385759 - 2385777 + g 74 -5.9 -4.4078 | overlap 2385761 GGACAGGAACGGCTT GCCGCTG TCATC CAGCGCC TTTTCATTGAAGGCC TERM 2032 2386412 - 2386368 - G 72 -13.5 -2.6927 | gap 1, overlap 2386365 ACGGGTGACATACCA GGCCAGCAGGC-CCGCCGCG ACCAGG CACGGCAGCGCCAGCCAGCC AGCGGTTCTTGCGAA Pput_2111 2388713 - 2386458 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 2033 2387463 - 2387448 - G 71 -8.2 -3.90744 | overlap 2387433 2387434 GTGGCGGCCAAAGAA GCCGCC CAGC AGCGGC GAGTGCAGGTTGATT Pput_2112 2389168 - 2388713 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 2034 2390568 - 2390552 - g 71 -13.7 -2.60496 | overlap 2390551 2390549 GTGCTGGCCAAATAC CCGGCGA TCG TCGCCGG CATCCAGGGCCTGGA Pput_2113 2389439 - 2391625 + | hypothetical protein Pput_2114 2392695 - 2391817 - | hypothetical protein TERM 2035 2391946 - 2391964 + g 74 -5.3 -4.63184 | gap 1, opp_overlap 2391949 AAACAGCACGGCCCA GAAC-GGC AATT GCCAGTTC TTTTTGCCCTGCATT TERM 2036 2392588 - 2392572 - G 77 -4.4 -4.82901 | overlap 2392555 GCTTTCCCATAAAAA CTGAGT CTGTT ACCCAG GGGTTTCTCAGGCAT TERM 2037 2392633 - 2392647 + g 71 -8.5 -3.89524 | CAAGCTTGATAGTTG CCCGC CAATA GCGGG TTTATGCCCTGAACT Pput_2115 2395688 - 2392698 - | hypothetical protein TERM 2038 2394213 - 2394227 + g 78 -10 -4.05446 | opp_overlap 2394209 GGCGCCGAACATGGC GCCGAT CGA ATCGGC TTTGTCCTTGAACGG Pput_2116 2396604 - 2395681 - | hypothetical protein Pput_2117 2398769 - 2396601 - | Rhs element Vgr protein TERM 2039 2398829 - 2398803 - R 79 -10.1 -4.15565 | opp_overlap 2398803 2398802 2398797, overlap 2398804 CTGAGTATTCGAAAA GCCCAGGCAGA GCGAG CCTGCCTGGGG CGTTTCAGTTAGATC TERM 2040 2398828 - 2398804 - R 78 -13.6 -3.09018 | opp_overlap 2398803 2398802 2398797, overlap 2398803 TGAGTATTCGAAAAG CCCAGGCAGA GCGAG CCTGCCTGGG GCGTTTCAGTTAGAT Pput_2118 2399358 - 2398843 - | hypothetical protein Pput_2119 2400360 - 2399491 - | hypothetical protein TERM 2041 2400004 - 2400033 + g 76 -11.3 -3.74762 | opp_overlap 2400004 GGAGTACGCCAGCAA CTGAGCCGGCTCG TAAC CGTGCTGGCGCAG TTCTTCCTGGATGTT Pput_2120 2401699 - 2400362 - | hypothetical protein Pput_2121 2402552 - 2401755 - | hypothetical protein TERM 2042 2401846 - 2401857 + g 76 -7.2 -4.26903 | overlap 2401844 ATGCGCAGAACTTGC CGCC AACT GGCG TTTTCATGCCCTCGG Pput_2122 2403118 - 2402549 - | FHA domain-containing protein Pput_2123 2404131 - 2403115 - | hypothetical protein Pput_2124 2405861 - 2404095 - | hypothetical protein Pput_2125 2406275 - 2405865 - | GPW/gp25 family protein TERM 2043 2406116 - 2406156 + g 71 -12.6 -3.08966 | gap 2 CGTTGAAGTCGCGCA GGCCCAGCTCAGGGCTGCTC TGG GAGCACCCCTG-GC-GGGCA TTCAGTAGCGTTTCG Pput_2126 2407762 - 2406272 - | hypothetical protein TERM 2044 2406623 - 2406633 + g 73 -8.2 -4.08945 | GGTCTGTGCCTGAAG CCCC TCA GGGG TTTTCGGGAAGTGCT TERM 2045 2407206 - 2407188 - G 73 -3 -4.73613 | opp_overlap 2407199, overlap 2407190 GGAGCAGCAAGAAAA GGGGCATG GGA CATGGCGC CAACGGAGGCCATGT Pput_2127 2408283 - 2407780 - | hypothetical protein TERM 2046 2408043 - 2408069 + g 70 -11.7 -3.18452 | gap 1 CCGGGGCGGTGCGAA GCCTGGACGGTA CCGT TA-CGTCCAGGC TTACGTTGGCGTCGT Pput_2128 2408611 - 2409261 + | hypothetical protein TERM 2047 2409767 - 2409742 - g 71 -8.9 -3.95022 | TGCAGCAACAGGAAA CAGTGCAGCTG GACA CGGCAGCACTG GGCGAACTTGAGCGC Pput_2129 2409249 - 2410712 + | ImpA domain-containing protein TERM 2048 2411340 - 2411303 - g 80 -5.5 -4.68593 | overlap 2411304 TTCATCAGTCAAAAA CCACCGGTGGGCTCG GCGGCCAA CGACCCCACCAATGC CTCCTCGCCGCCCGG TERM 2049 2411872 - 2411897 + G 74 -14.1 -2.83715 | gap 1, overlap 2411874 GGCGAGTGACCGGTT CACCACGCCACC CTT GGTG-CGTGGTG TGTACTGGTCGTCAG TERM 2050 2412321 - 2412357 + G 71 -5.9 -4.34267 | gap 1, overlap 2412323 2412353 ATGCGGTGGCGGTGT TTGGCGACTATCGTGC GGCCTG GC-CGGTGGTTGCCGA TTTTGGCTTGTATCA Pput_2130 2410709 - 2414329 + | ImcF domain-containing protein Pput_2131 2416260 - 2414407 - | ABC transporter related TERM 2051 2415076 - 2415093 + g 74 -4.8 -4.56597 | gap 1, opp_overlap 2415055, overlap 2415076 2415077 CTTGCCGGCGCCGGA G-CGGCC GACCA GGCCGAC TTTTTCGCCCGGACG Pput_2132 2416563 - 2418053 + | hypothetical protein Pput_2133 2418228 - 2419841 + | hypothetical protein Pput_2134 2419838 - 2420056 + | hypothetical protein Pput_2135 2420053 - 2420760 + | cellulose synthase, putative TERM 2052 2421910 - 2421928 + G 79 -8.8 -4.32177 | opp_overlap 2421904 2421903 ACGCTAAACTGGCGC TGGTGCAG ACA CCGCACCA TTTCTTCTCGCCTGA TERM 2053 2422616 - 2422599 - g 77 -2.7 -5.00616 | gap 1 TTCGCGCCGAAAAAA GGC-ACGT TCA ACGTCACC GCCAAGGGCGGCCTG bcsA 2420757 - 2423366 + | cellulose synthase catalytic subunit Pput_2137 2423402 - 2425651 + | cellulose synthase regulator protein TERM 2054 2426528 - 2426549 + G 70 -7.9 -4.03978 | gap 1, overlap 2426516 CACGTAGCGGTGAAG CCCG-CGGCC ATG GCCCGGCGGG TTTCTCTGCGGCCTT Pput_2138 2425663 - 2426766 + | endo-1,4-D-glucanase TERM 2055 2427285 - 2427319 + G 85 -15.6 -3.53444 | overlap 2427281 TTGGATCAGCAGTAC CCGGGCAGTGCCGGGC TGC GCCAGACACTGACCGG TTGGTTGTTCGCCGA TERM 2056 2427852 - 2427870 + G 74 -11.7 -3.53224 | opp_overlap 2427826 2427851 2427849 2427852 CTGGAGGCGAAAGAC GTGCGCG GTGCG CGCGCAC TTTACCGGCAGGCTC Pput_2139 2426754 - 2430272 + | cellulose synthase subunit BcsC TERM 2057 2430570 - 2430602 + F 76 -5.5 -4.70659 | CTTCCACTCTTCACC CTGCTGACGCTGACT TTC GGTCAACATCAGGAG TTTTTGCATGTCGAA Pput_2140 2430610 - 2431476 + | dihydrodipicolinate synthase TERM 2058 2431620 - 2431597 - f 73 -12.4 -3.04755 | opp_overlap 2431597, overlap 2431594 2431589 CCAAAGAGCAAATGA GCTCTCTCCG CATG CGGAGAGGGC TTTTTTTCGTCCCTG TERM 2059 2431597 - 2431620 + F 100 -14.6 -5.53991 | opp_overlap 2431594 2431589 2431597 CCAAAGAGCAAATGA GCTCTCTCCG CATG CGGAGAGGGC TTTTTTTCGTCCCTG TERM 2060 2431795 - 2431774 - g 73 -6.5 -4.30034 | overlap 2431775 AAAACGCCAGGAAAA TCGCCGACA TCAT TGTCGGCAT GAAGCAGGGGCTGCC amiE 2431662 - 2432705 + | acylamide amidohydrolase TERM 2061 2432716 - 2432737 + F 75 -11.6 -3.53012 | overlap 2432713 GCTGACGGGGTTGCC CAGCGTGC TTGCGT GCACGCTG TTTCACAAAGCGAGG TERM 2062 2433452 - 2433494 + G 88 -15 -3.73953 | gap 2, overlap 2433449 2433447 2433483 TGGGCCCGCTGGCGC CGCT-GCGGCGT-CTGCTTG GCCTG CAGGCAGGGCGCCGCGAGCG TTTGCTGGGGCTGGT TERM 2063 2433517 - 2433530 + G 83 -6.7 -4.84017 | overlap 2433483 GGGCTGGTGCGGCGG CGCTT GGTG AAGCG TTTTTCTGCCGAGTT TERM 2064 2433852 - 2433863 + G 75 -3.6 -4.8622 | opp_overlap 2433821, overlap 2433846 2433847 CGGCCACCTTGAGCG CGGG CGCA TCCG TTTTTCGTTGCCGAC Pput_2142 2432761 - 2433882 + | ATPase Pput_2143 2433904 - 2435061 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pput_2144 2435058 - 2435642 + | response regulator receiver/ANTAR domain-containing protein Pput_2145 2435655 - 2436167 + | AmiS/UreI transporter Pput_2146 2436660 - 2436214 - | GCN5-related N-acetyltransferase TERM 2065 2436340 - 2436367 + g 76 -13.4 -3.14881 | overlap 2436354 CTTTACCGTCACCAC CTCAGCGCTGGC ATGC GCCAGTGCTGCG TTCATCAGGCGCTTG Pput_2147 2438421 - 2436733 - | oxidoreductase FAD-binding subunit TERM 2066 2438757 - 2438795 + G 72 -7.3 -4.13945 | gap 1, opp_overlap 2438702 2438754, overlap 2438756 2438757 2438791 TGTCAGCCAACAGCT GG-CGCCTGGCACAGCGG CCGT TTGCGGTGCCGTGCGGCC TTTTGCCCTGGCGCT TERM 2067 2438873 - 2438883 + G 71 -8.2 -3.9461 | opp_overlap 2438869, overlap 2438866 TAGCCCAACAAGGCC GGCC AGG GGCC TTGTTCTTCGACAAC Pput_2148 2438500 - 2439996 + | GntR family transcriptional regulator Pput_2149 2440267 - 2441892 + | methyl-accepting chemotaxis sensory transducer TERM 2068 2441989 - 2442006 + F 90 -8.3 -5.16572 | overlap 2441990 TGAATAAAGTTCGAC CGCCCCG AGCG CGGGGCC TTTTTTCCCTTCACT TERM 2069 2441990 - 2442005 + F 79 -11.8 -3.68859 | overlap 2441989 GAATAAAGTTCGACC GCCCCG AGCG CGGGGC CTTTTTTCCCTTCAC TERM 2070 2442290 - 2442332 + F 71 -11.3 -3.15579 | gap 1, overlap 2442292 2442313 2442314 CACGGCTACCTTGAC CAC-CACCAGCACCCCCCAA GTAG TTGCGGGGTGCTGGCGCGTC TTCATGCACGCTTGA TERM 2071 2442292 - 2442330 + F 78 -13.9 -3.13899 | gap 1, overlap 2442290 2442313 2442314 CGGCTACCTTGACCA C-CACCAGCACCCCCCAA GTAG TTGCGGGGTGCTGGCGCG TCTTCATGCACGCTT TERM 2072 2444311 - 2444297 - g 74 -9.2 -3.90291 | overlap 2444298 ACCCGCCCAAGGAAA CGGCCG GCC CGGCCA TTGCCGCCTTGCGCG TERM 2073 2444635 - 2444580 - g 76 -13.8 -3.16564 | TGGCGACGGCATCAA CGATGCCGCCGCCCTGCGCGATGCTG ACGT CGGTATCTCGGTGGACAGCGGCACCG ACATCGCCAAGGAAT Pput_2150 2442634 - 2445348 + | magnesium-translocating P-type ATPase TERM 2074 2445408 - 2445465 + G 73 -12.5 -3.14132 | gap 1, opp_overlap 2445402 2445399 ACGCAACTACGCCGA CACCCGACGCTGCCGCCAGGCCTTGGAC GAC GTCCAGCGCCAG-CGGCCGATCCGGGTG TTGATCCACGGCGGC Pput_2151 2445370 - 2445747 + | hypothetical protein TERM 2075 2445830 - 2445844 + T 74 -12.8 -2.73681 | CTCAAGCTTTGCGCA GCCGCC CTG GGCGGC TGCTTAACCTGGCTG Pput_2152 2447074 - 2445848 - | major facilitator transporter TERM 2076 2445934 - 2445911 - G 76 -10.2 -3.88291 | CAGCACGGTGACAAA GCCACAGCCC ACCA GCGCCGTGGC CAGGCTCAGCAGTAC Pput_2153 2447921 - 2447367 - | GCN5-related N-acetyltransferase Pput_2154 2448030 - 2448926 + | helix-turn-helix domain-containing protein TERM 2077 2448938 - 2448981 + T 93 -18.8 -2.85351 | CTGACGCTTGCACAG CGGCGCCTGCCGAGGGCGCT TAGC AGCGTGCTCGGCAGGCACGG TATGCTATGGCGAGA Pput_2155 2449861 - 2448986 - | UspA domain-containing protein TERM 2078 2450184 - 2450156 - R 71 -11 -3.20747 | opp_overlap 2450176 ATGAAACCGCATTAA CTGTCGCAGCGC TGTCG GCCCTGCAACAG CAGCAGTTCGGTGAG Pput_2156 2451093 - 2450152 - | LysR family transcriptional regulator Pput_2157 2451236 - 2452378 + | iron-containing alcohol dehydrogenase Pput_2158 2452423 - 2453766 + | major facilitator transporter Pput_2159 2453904 - 2454689 + | hydratase/decarboxylase Pput_2160 2455497 - 2454679 - | XRE family transcriptional regulator Pput_2161 2455604 - 2455918 + | hypothetical protein Pput_2162 2455915 - 2456340 + | membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) Pput_2163 2456418 - 2456645 + | hypothetical protein Pput_2164 2456962 - 2457993 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 2079 2457998 - 2458041 + F 73 -12.5 -2.59431 | gap 1, opp_overlap 2457996, overlap 2458002 2458032 ACATCCAGTAATACC CAGGCGCTCCCGGTATCGGC ATGAA GCC-ATGCCGGGGGTGTTTG TCCCTTGTCCCGGAA TERM 2080 2458002 - 2458037 + F 85 -11.9 -4.00066 | gap 1, opp_overlap 2457996, overlap 2457998 2458032 CCAGTAATACCCAGG CGCTCCCGGTATCGGC ATGAA GCC-ATGCCGGGGGTG TTTGTCCCTTGTCCC TERM 2081 2458344 - 2458385 + G 76 -8 -4.25104 | gap 1 TGTACAGCGCCTTGA TCGCCCTGTTGATCGCCGG TTTCT TCGGCG-TCAGCATGGCCA TTTTCCTGACCCAGG Pput_2165 2458064 - 2459032 + | phosphate ABC transporter, inner membrane subunit PstC Pput_2166 2459029 - 2459922 + | phosphate ABC transporter, inner membrane subunit PstA Pput_2167 2459973 - 2460758 + | phosphate ABC transporter, ATPase subunit TERM 2082 2460823 - 2460768 - f 72 -9.7 -3.55368 | gap 1, opp_overlap 2460774 AGCTAAGCCATACAA GCTCAAGGTGGGCGGGTGTTGCAGCC AGGAA GGTTGCAACACCCGGCCGCGTT-ACC TTCCGTTAAAGTGTT TERM 2083 2460774 - 2460818 + F 95 -18.6 -3.20991 | opp_overlap 2460768 GCCATACAAGCTCAA GGTGGGCGGGTGTTGCAGCC AGGAA GGTTGCAACACCCGGCCGCG TTACCTTCCGTTAAA TERM 2084 2460892 - 2460917 + G 70 -7.5 -4.08767 | gap 1 CTGTCAGCGGTAGAG CGCGCACTGCGC GAG GTGCAGGGC-CG TTTTGCCGAACTCAG TERM 2085 2461473 - 2461461 - g 82 -3.3 -5.19251 | overlap 2461465 CAAGATCAAGAAAAA GTACG CCG CGTTC CTGGAAGCGAAGGCG Pput_2168 2460853 - 2461551 + | hypothetical protein Pput_2169 2461551 - 2462150 + | hypothetical protein TERM 2086 2463438 - 2463449 + G 72 -7.2 -4.10657 | opp_overlap 2463433 TCTTCACCAACAATG CCGG CGAA CCGG TTTTGCGCAATGTCG Pput_2170 2462543 - 2463730 + | hypothetical protein TERM 2087 2464617 - 2464663 + GF 78 -12.8 -3.22476 | CGGTGTGCCCGTGGC TGCGCTCGATCACCGGGTGTTC GCC GCCCACCCGCTGGCCGTGCGCA TTCATGATCAGTACT TERM 2088 2464802 - 2464847 + GF 72 -9.7 -3.65738 | gap 1, overlap 2464798 2464803 ACCTGCACCAGCTGT TCGATGGCCTGCACCAGC-GTC TCG GACCGTTGCTGCTGACCATCGG TTGTGATTGTTTCCT Pput_2171 2463871 - 2465034 + | hypothetical protein TERM 2089 2465685 - 2465634 - gT 75 -13 -3.02511 | gap 1, overlap 2465619 2465675 CCGAGCGCCGCAACA CCGCACAGGCGTTGCACCAGGC-CT ATC AGCACCTGGAGCAACGGGTGCGCGA GCGCACTGCCGAACT Pput_2172 2464964 - 2466901 + | PAS/PAC sensor hybrid histidine kinase Pput_2173 2467612 - 2466947 - | two component LuxR family transcriptional regulator TERM 2090 2467190 - 2467203 + g 74 -5.9 -4.45201 | overlap 2467194 TGGGGCATCGTTATG GCGCC GGCT GGTGC TGTTTTTTTGTGCGC TERM 2091 2467194 - 2467205 + g 93 -3.6 -5.60993 | overlap 2467190 GCATCGTTATGGCGC CGGC TGGT GCTG TTTTTTTGTGCGCGG Pput_2174 2468227 - 2467667 - | rhodanese domain-containing protein TERM 2092 2467837 - 2467823 - G 71 -5.7 -4.26076 | opp_overlap 2467833 GGAGCGGCAGTAAAA GACCA GTGGT TGGTC CGGGTGCCCGGCCGT TERM 2093 2468228 - 2468239 + r 79 -2.2 -5.19328 | CAGGGCACGTGGCAT GGAG GTTT TTCC TTTTTGTTATGGACT TERM 2094 2468401 - 2468385 - R 88 -15.1 -3.53012 | opp_overlap 2468377 GCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC TCGGATTTCAGCACT TERM 2095 2468432 - 2468448 + r 82 -13.7 -3.53012 | GTACATAGATTGCCG GGGCTGC TGC GCAGCCC TTTCGCGACACAAGG Pput_2175 2469278 - 2468496 - | ABC transporter related TERM 2096 2469041 - 2469078 + g 73 -13.3 -3.14344 | CCAGGTCGATGCCGT CCACCTGGATGCTGCCC TGCT GGGCGACTTCCAGGCGG TTGATGCAACGGATC Pput_2176 2470545 - 2469301 - | FAD dependent oxidoreductase TERM 2097 2469976 - 2470012 + g 75 -13.8 -3.06492 | gap 1, overlap 2469979 GGTTTTCGGGTCGAG CCAG-TGGATGCCACCG ACCA CGGTGGCGTCCAGCTGA TGTTCACGTGCCTGC TERM 2098 2469979 - 2470009 + g 72 -14.1 -2.75074 | gap 1, overlap 2469976 TTTCGGGTCGAGCCA G-TGGATGCCACCG ACCA CGGTGGCGTCCAGC TGATGTTCACGTGCC Pput_2177 2471272 - 2470562 - | polar amino acid ABC transporter, inner membrane subunit Pput_2178 2471988 - 2471269 - | polar amino acid ABC transporter, inner membrane subunit Pput_2179 2472892 - 2472140 - | extracellular solute-binding protein TERM 2099 2472367 - 2472398 + g 73 -12.8 -3.21199 | opp_overlap 2472367 ATTTGTCGGCAATCA CGCCGTCCAGGCGG CCGG CCGCCAGGTCTGCG TTGGCTTCGTCCATG Pput_2180 2473787 - 2472915 - | RpiR family transcriptional regulator TERM 2100 2473478 - 2473509 + g 84 -15.8 -3.3197 | CGGCGATTTCCAGCT CCAGGCTGCCGGCG TTGT CGCTGGCGTCCTGG TTCTGGCGGTAATCT TERM 2101 2474681 - 2474693 + G 70 -7.7 -3.96892 | overlap 2474665 TGCTGGCGGCGGCGC TGACC GGC GGTCA TTTCTCCTGGGAGTT Pput_2181 2473930 - 2474955 + | malate/L-lactate dehydrogenase Pput_2182 2475119 - 2476315 + | aromatic amino acid aminotransferase TERM 2102 2476409 - 2476391 - f 75 -11.6 -3.53012 | opp_overlap 2476382 2476401, overlap 2476392 CCTTGCGTCGCGAAA GGGGGGCG GAG CGCCCCCA CGATTGCAGCTTTGC TERM 2103 2476408 - 2476392 - f 80 -15.1 -2.71712 | opp_overlap 2476382 2476401, overlap 2476391 CTTGCGTCGCGAAAG GGGGGCG GAG CGCCCCC ACGATTGCAGCTTTG TERM 2104 2476439 - 2476455 + F 88 -15.1 -3.53012 | overlap 2476401 CCGCTGACATTGCTG GGGCCGC TTT GCGGCCC TTTCGCGACGCAAGG Pput_2183 2476699 - 2477979 + | aromatic amino acid permease TERM 2105 2478029 - 2478001 - T 91 -16 -3.67597 | opp_overlap 2478001 CGTTTCATTCAAGAA TGCCCGGGTCGC TTGTC GCCACCCGGGCA TTTTTTTGCCTGATC TERM 2106 2478001 - 2478029 + T 100 -16 -5.48825 | opp_overlap 2478001 CGTTTCATTCAAGAA TGCCCGGGTCGC TTGTC GCCACCCGGGCA TTTTTTTGCCTGATC Pput_2184 2479239 - 2478043 - | major facilitator transporter TERM 2107 2478390 - 2478402 + g 80 -4.8 -4.90525 | opp_overlap 2478390, overlap 2478385 CCGCCGTACTTATAA GCAG CAAGC CTGC TTTTATTTGAGCTTG TERM 2108 2479597 - 2479616 + G 76 -10.6 -3.93695 | GGTAACCTGCCACAG GCCGGCGC CCAG GCTCCGGC TTTCTCCCTGGTAGG Pput_2185 2479540 - 2480040 + | redoxin domain-containing protein TERM 2109 2480229 - 2480252 + F 100 -18.2 -4.564 | opp_overlap 2480222 2480221 AGCAACACCCTGTAA CGGCCCGGAA CACG TTCCGGGCCG TTTTCATTTAAAATT TERM 2110 2480932 - 2480893 - g 89 -14.4 -3.91084 | gap 1 GCATCGCCAAGCAAA CCCTGGACACTGCCCAAGC CCA GGTTGCGCAGT-TCCAGGG GCTGGTCAAGACCAA Pput_2186 2480388 - 2481695 + | RND family efflux transporter MFP subunit Pput_2187 2481692 - 2484790 + | acriflavin resistance protein Pput_2188 2484787 - 2487894 + | acriflavin resistance protein Pput_2189 2487891 - 2489381 + | RND efflux system outer membrane lipoprotein TERM 2111 2491519 - 2491548 + G 86 -13.5 -3.86822 | TCGTTGCAGGGCTAC CTGCTGGGCCAGC CCGT GCCGGCCGAGCAG TTTATGAGCAAGTTG Pput_2190 2489512 - 2491599 + | diguanylate cyclase/phosphodiesterase Pput_2191 2491911 - 2491651 - | hypothetical protein Pput_2192 2492833 - 2492186 - | hypothetical protein TERM 2112 2493261 - 2493232 - g 75 -4.1 -4.72986 | TACCGCCAGGAAAAA GGCATCGATGGCC CGCT GTTCATCGGCGCC GATACCCACGCCCTG Pput_2193 2493007 - 2494644 + | phosphoglucomutase Pput_2194 2494723 - 2495235 + | ECF subfamily RNA polymerase sigma-24 factor Pput_2195 2495232 - 2496176 + | anti-FecI sigma factor, FecR TERM 2113 2496293 - 2496260 - g 81 -6.5 -4.72272 | opp_overlap 2496261, overlap 2496261 2496262 TGCCTGCAGTAAAAA CTTGCCGCCTGCGCC CACT GGCGCGCGCAGCACA TCCATTGTTCGCGAT TERM 2114 2497798 - 2497812 + G 78 -3.5 -5.00616 | TCCGGCGTGGCCCTG GCCGA CACCC TTGGC TTTTTTGACGACCGC Pput_2196 2496244 - 2498649 + | TonB-dependent siderophore receptor TERM 2115 2498717 - 2498744 + T 70 -9.8 -3.53012 | overlap 2498694 TCGGTGCATGGCACC GGCTTCGGCAGT GTTC GCGGCTGAAGCC TTTCCCACAGGGGAG Pput_2197 2499713 - 2498775 - | LysR family transcriptional regulator TERM 2116 2499133 - 2499102 - G 77 -13.8 -3.27923 | gap 1 CCGGAACAGCAGCAA CGCATGACCCTCCAG CTG CTGCAGGGTCA-GCG CGGGCTGACCGGCCA TERM 2117 2499425 - 2499396 - G 76 -13.5 -3.16971 | opp_overlap 2499389 2499412 GCACGAGATACGCAA CTTGCGCTGGCCG CCAG CGCCCAGCGCCAG GGCACATTCGTTGAC Pput_2198 2499862 - 2500689 + | amidohydrolase 2 TERM 2118 2500764 - 2500750 - f 71 -9.2 -3.71517 | overlap 2500745 2500753 GAACACTGAACAGAA CACCCG TCC CGGGCG GCATCCTCCATGGCC TERM 2119 2501025 - 2501013 - g 79 -9.1 -4.23723 | GAACAGCACGGAAAA CGGCT TCG AGCCG GTGCTGCGCCAGGCA Pput_2199 2500867 - 2501607 + | short-chain dehydrogenase/reductase SDR Pput_2200 2502226 - 2501810 - | endoribonuclease L-PSP TERM 2120 2501926 - 2501979 + g 75 -14 -3.05343 | opp_overlap 2501941 CCTTGAGCCATTTGC CCACCTCTTTATA-CACCGGCTCGCG GAAG CGCGGGTCGGTGATGT-AGGTGGTGG TCTTGACGATGTGCG Pput_2201 2503545 - 2502226 - | flavoprotein involved in K+ transport-like protein TERM 2121 2502947 - 2502986 + g 71 -13.4 -2.56596 | overlap 2502944 CGCGGCGGGCGGTCG TGGGCGCCGACCGACAGG TACA CCTGGCGCCCGGCGCGCA TCAATTCCTCGGCAA TERM 2122 2503806 - 2503794 - H 71 -4.7 -4.56775 | ACCCCCTCGGAAAAA GGTCG TTT CGCCC GCCCGAAGGTTCCAC Pput_2202 2503863 - 2504540 + | hypothetical protein TERM 2123 2504909 - 2504925 + G 71 -5.8 -4.34402 | CGCAGCCGCTGCGCA TGCCGG TACAC CTGGCA TTTTCCTATGACGAA Pput_2203 2504533 - 2505693 + | acetylornithine deacetylase Pput_2204 2507003 - 2505735 - | carbohydrate-selective porin OprB Pput_2205 2509521 - 2507104 - | Pyrrolo-quinoline quinone TERM 2124 2507428 - 2507452 + g 72 -12.1 -3.2794 | overlap 2507430 AACGGTGCCGACCGG CACCTGCCAGG CCA CCTGGCGGGTC TTCATGTCGATGGCG TERM 2125 2507430 - 2507450 + g 80 -14.7 -3.20573 | overlap 2507428 CGGTGCCGACCGGCA CCTGCCAGG CCA CCTGGCGGG TCTTCATGTCGATGG Pput_2206 2510134 - 2509784 - | cupin 2 domain-containing protein Pput_2207 2510252 - 2511157 + | LysR family transcriptional regulator Pput_2208 2511264 - 2512463 + | major facilitator transporter Pput_2209 2513122 - 2512511 - | lysine exporter protein LysE/YggA TERM 2126 2513634 - 2513660 + G 79 -9.4 -4.11484 | opp_overlap 2513644 GGTGGTGGTGCACTG GCGTCACGAAGC CGA GTTTCGTGCTGC TTTTCCGCAGTTGCA Pput_2210 2513227 - 2514204 + | AraC family transcriptional regulator Pput_2211 2515057 - 2514206 - | SCP-like extracellular protein Pput_2212 2515875 - 2515264 - | cell wall hydrolase, SleB Pput_2213 2516836 - 2515910 - | auxin efflux carrier TERM 2127 2516764 - 2516751 - G 76 -5.9 -4.63218 | CTCTCGGCAAGAAAA CCGCG AAGG CGCAG GAAGGTACCCAGCGC Pput_2214 2517826 - 2516963 - | LysR family transcriptional regulator TERM 2128 2517001 - 2517012 + g 82 -3.6 -5.1861 | ACACCGCACTCAAAT GCCG CCGC TGGC TTTTTTCATGCTCCA Pput_2215 2518768 - 2517920 - | binding-protein-dependent transport systems inner membrane component TERM 2129 2518408 - 2518384 - G 75 -14.9 -2.74523 | overlap 2518381 GTACCGGCAACAGCA GCCGCCTGGCC AGT GGCCGGGCAGC CAGCAGGATGCCCAG TERM 2130 2518753 - 2518739 - G 76 -5.6 -4.54727 | overlap 2518741 GTCGGCAAAGGAAAA CTGCAG GGT CTGCGG GAAACCGCTGCTCAC Pput_2216 2519781 - 2518765 - | substrate-binding region of ABC-type glycine betaine transport system TERM 2131 2518857 - 2518872 + g 88 -8.2 -4.68593 | AGGTGAGGGCGGCTT CGCGCG GGGG CGTGCG TTTTTCGCTCATGAC TERM 2132 2519312 - 2519297 - G 76 -7.5 -4.36914 | opp_overlap 2519282 GGGCTGTTGAGAAAA CGCCC TTTACC GGGCG ATTCGGGGTCAGAAA TERM 2133 2519849 - 2519870 + r 71 -11.5 -3.17075 | AGGTTTTGTCAGTTT CAGGGCCAC TGGC GTGGCCCCG TTCGCTTCAGACGCG Pput_2217 2522021 - 2519877 - | methyl-accepting chemotaxis sensory transducer TERM 2134 2522127 - 2522138 + H 100 -7.2 -5.80003 | opp_overlap 2522126 TGCCTCCCTCAATAT CGGC CCCT GCCG TTTTTTCTTTATTCA Pput_2218 2522269 - 2523588 + | Na+/H+ antiporter NhaC Pput_2219 2524610 - 2523603 - | anti-FecI sigma factor, FecR Pput_2220 2526668 - 2524884 - | acyl-CoA dehydrogenase domain-containing protein TERM 2135 2525283 - 2525253 - G 74 -11.9 -3.53224 | overlap 2525232 CACTTCGCTGGCAAA GCTGGCCAACG CCTGACCAC CGTCGGCCAGC ACCTTGCGCCCCAGC TERM 2136 2526465 - 2526506 + g 91 -12.3 -4.36411 | gap 1 GCACACACCTTGCTC GTCACCGTTGCGGCTGAGCG GGG CGATCAGCTG-GCCGGTGAC TTTTGATGCTTCCTC Pput_2221 2528368 - 2526746 - | acyl-CoA synthetase TERM 2137 2526929 - 2526943 + g 72 -2.7 -4.72272 | overlap 2526930 2526930 GGCAACGAAGGCGCA CGGGG TTTCC CCCCA TTTTTCATCCGGGCG TERM 2138 2528449 - 2528472 + H 82 -15.2 -2.91429 | overlap 2528440 TCTGTTCAGGGTGCA GGGGGCGGAC GGTG GGCCGCCCCC TCTGTCGCAGTTTTA TERM 2139 2528559 - 2528549 - H 80 -5.4 -4.95806 | overlap 2528540 AAACTACTATAAAAA TAGG CCG CCTA CTGTGGATGACACTG Pput_2222 2528562 - 2529968 + | PAS/PAC sensor signal transduction histidine kinase Pput_2223 2529978 - 2530610 + | response regulator receiver protein TERM 2140 2530620 - 2530642 + F 77 -11.2 -3.59202 | CGGTAGCCGCCTTTA CGTAGCCCCT GGC AGGGGCGGCG TTGTGTGTCGCAATG Pput_2224 2530791 - 2531264 + | MarR family transcriptional regulator Pput_2225 2531295 - 2532488 + | secretion protein HlyD family protein Pput_2226 2532485 - 2534020 + | EmrB/QacA family drug resistance transporter TERM 2141 2534268 - 2534295 + F 82 -2.4 -5.33921 | opp_overlap 2534255 AACCCCGGAGCGTAG CGCAGGGGCCGG ATGA CAGGAGCCAGCG TTTTTTGGTTACTTT Pput_2227 2534949 - 2535695 + | short-chain dehydrogenase/reductase SDR Pput_2228 2537771 - 2535705 - | PAS/PAC sensor hybrid histidine kinase Pput_2229 2539495 - 2537834 - | PAS/PAC sensor hybrid histidine kinase TERM 2142 2538517 - 2538503 - G 79 -11.4 -3.95073 | opp_overlap 2538496 2538506 GCGGATACGCAGAAA CTGGCC AGC GGCCAG GCCCCGCTGTCTGGC Pput_2230 2540962 - 2539553 - | GntR family transcriptional regulator Pput_2231 2542416 - 2541013 - | cytochrome c oxidase cbb3 type, accessory protein FixG Pput_2232 2542777 - 2542538 - | hypothetical protein Pput_2233 2542947 - 2543465 + | MgtC/SapB transporter TERM 2143 2543446 - 2543504 + T 100 -3.7 -5.95946 | gap 1, opp_overlap 2543448 2543450 2543459, overlap 2543448 2543451 AGAAGCAGAAGGAGG AAGAGGGCAGGA-AGCACTGAGGGGAGC CGAA GCTCCCCTCAAAGCGGTGTTGCCTGCTC TTTTTTTATTATTGG TERM 2144 2543448 - 2543502 + T 75 -6.3 -4.59954 | gap 1, opp_overlap 2543448 2543450 2543459, overlap 2543446 2543451 AAGCAGAAGGAGGAA GAGGGCAGGA-AGCACTGAGGGGAGC CGAA GCTCCCCTCAAAGCGGTGTTGCCTGC TCTTTTTTTATTATT TERM 2145 2543490 - 2543459 - T 88 -16.6 -3.18735 | opp_overlap 2543451 2543448 2543446, overlap 2543450 2543448 GGAAGAGGGCAGGAA GCACTGAGGGGAGC CGAA GCTCCCCTCAAAGC GGTGTTGCCTGCTCT TERM 2146 2543649 - 2543662 + T 84 -6.7 -4.97957 | CGAACCTGGCTGCCG CTACC TTGA GGTAG TTTTATTGTTCTGTG Pput_2234 2544897 - 2543998 - | hydroxymethylglutaryl-CoA lyase Pput_2235 2545315 - 2544917 - | MerR family transcriptional regulator Pput_2236 2546269 - 2545391 - | AraC family transcriptional regulator TERM 2147 2547245 - 2547231 - g 81 -4.2 -5.00616 | overlap 2547235 CCGCGTTGGAAAAAA GCATTG CGC CACTGC GTAGCCTGGTGGTCG Pput_2237 2546363 - 2547628 + | 4-hydroxybenzoate 3-monooxygenase Pput_2238 2547773 - 2549569 + | gamma-glutamyltransferase Pput_2239 2549614 - 2550495 + | LysR family transcriptional regulator Pput_2240 2551700 - 2550648 - | ornithine cyclodeaminase Pput_2241 2551888 - 2552310 + | AsnC family transcriptional regulator TERM 2148 2552359 - 2552343 - T 76 -3.5 -4.85599 | overlap 2552344 GGTATTGCATAAAAA GCTGCTG GCC CTGCTGC AGTCGGTCTGCGGCC Pput_2242 2552984 - 2552385 - | lipid-binding START domain-containing protein TERM 2149 2552502 - 2552451 - G 70 -7.9 -3.97947 | gap 2 TGTATCCACCACAAA CCGGTTGGCCAGCCACCCCGGCACA TCCC CG-GCAGGGGCGGCCTGC-AACTGG TAGGTCACCTCGGTC TERM 2150 2553057 - 2553031 - R 90 -16.6 -3.34715 | overlap 2553035 TATGCGCGGCAAACA GAAAGCCCGCCA GGT TGGCGGGCTTGC GGGCATCAGCCTGGG TERM 2151 2553053 - 2553035 - R 100 -16 -4.32857 | overlap 2553031 CGCGGCAAACAGAAA GCCCGCCA GGT TGGCGGGC TTGCGGGCATCAGCC Pput_2243 2554009 - 2553074 - | hypothetical protein Pput_2244 2555408 - 2554017 - | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Pput_2245 2556405 - 2555425 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Pput_2246 2556666 - 2557550 + | hypothetical protein Pput_2247 2557699 - 2558382 + | TetR family transcriptional regulator Pput_2248 2559428 - 2558421 - | helix-turn-helix domain-containing protein TERM 2152 2559065 - 2559039 - G 77 -13.6 -3.28712 | overlap 2559024 GGCGCCGTTCCACAA GCCGCCCAAGGC CAT GCCGTGGGCCGC GCAATCGTCCAGCAG Pput_2249 2559590 - 2560060 + | hypothetical protein Pput_2250 2560044 - 2560376 + | hypothetical protein TERM 2153 2560374 - 2560423 + T 95 -17.1 -3.54129 | opp_overlap 2560374 GTGCTGCAGGAAAAA TGACGGTTTGCGGCCTCGGGCGC GGGG GCGCCTGAGGCCGTCGAGGGTCA TTTGGGCAGGATGTC TERM 2154 2560423 - 2560374 - T 95 -10.5 -4.72272 | opp_overlap 2560374 GTGCTGCAGGAAAAA TGACGGTTTGCGGCCTCGGGCGC GGGG GCGCCTGAGGCCGTCGAGGGTCA TTTGGGCAGGATGTC Pput_2251 2560747 - 2560421 - | hypothetical protein TERM 2155 2561049 - 2561065 + H 74 -7.2 -4.19953 | overlap 2561033 AGTCGGGCGCGACCC CGGCCG TTCCT CGGCTG TTTTCGCCTTGCCTG Pput_2252 2561254 - 2561676 + | endoribonuclease L-PSP Pput_2253 2561821 - 2562855 + | hypothetical protein TERM 2156 2563463 - 2563494 + G 79 -10.8 -3.82486 | TCCTGTTTTCTGCGG CGTACCTGCAACTG GGCG CAGGTGCAGGGGCG TTGTTGCTGTTCGGT Pput_2254 2563186 - 2564058 + | hypothetical protein Pput_2255 2564774 - 2564055 - | hypothetical protein Pput_2256 2565107 - 2564856 - | hypothetical protein TERM 2157 2566250 - 2566232 - g 95 -11 -4.4204 | overlap 2566244 AACAACCAGAACAAA TGGCAGCA CAA TGCCGCCA ACCGCGACGGGGTGC Pput_2257 2565353 - 2566819 + | hypothetical protein Pput_2258 2566816 - 2567709 + | hypothetical protein Pput_2259 2568725 - 2567769 - | helix-turn-helix domain-containing protein TERM 2158 2568836 - 2568808 - R 100 -19.6 -4.62069 | opp_overlap 2568808 TTGTTATTGTAAAAA CCGCCCGGCAGC GCAAA ACTGCCGGGCGG TTGTCAGGCCCATGA TERM 2159 2568808 - 2568836 + r 95 -18.9 -3.29144 | opp_overlap 2568808 TTGTTATTGTAAAAA CCGCCCGGCAG CGCAAAA CTGCCGGGCGG TTGTCAGGCCCATGA Pput_2260 2570958 - 2568874 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 2160 2570693 - 2570749 + g 80 -14.4 -3.14564 | gap 2, opp_overlap 2570694 CCCTCGGTGCACAGC AGGC-CCACCTTGACCC-CGGTGCGCTC GAT GAGCGCGTTGAGGGCCACGGTGGTGCCG TTGATGCACAGGTCA TERM 2161 2570748 - 2570694 - G 71 -13.5 -2.62184 | gap 2, opp_overlap 2570693 CCTCGGTGCACAGCA GGC-CCACCTTGACCC-CGGTGCGCTC GAT GAGCGCGTTGAGGGCCACGGTGGTGCC GTTGATGCACAGGTC Pput_2261 2572717 - 2570972 - | hydantoinase B/oxoprolinase Pput_2262 2573792 - 2572872 - | LysR family transcriptional regulator TERM 2162 2574243 - 2574212 - g 89 -14.4 -3.85698 | gap 1, opp_overlap 2574211 2574208, overlap 2574196 TGGGCGTTCGACAAA GCCCGGCACCTGCTG GTG CAGC-GGCGCCTGGC ATGATTCTGCCACCT Pput_2263 2573807 - 2574247 + | transmembrane pair domain-containing protein TERM 2163 2574558 - 2574518 - T 100 -22.2 -2.7083 | gap 1, opp_overlap 2574525, overlap 2574525 GACCGTATAAACCCA TGAAAAACGGGGCATGCCA TCGC TGGCATGCCCCGTTTT-CA TACAGCTGATGCGCC TERM 2164 2574525 - 2574552 + T 100 -21.4 -4.26076 | opp_overlap 2574518 2574525 TAAACCCATGAAAAA CGGGGCATGCCA TCGC TGGCATGCCCCG TTTTCATACAGCTGA TERM 2165 2574552 - 2574525 - T 100 -21.4 -4.78764 | opp_overlap 2574525, overlap 2574518 TAAACCCATGAAAAA CGGGGCATGCCA TCGC TGGCATGCCCCG TTTTCATACAGCTGA Pput_2264 2575593 - 2574574 - | branched-chain amino acid aminotransferase Pput_2265 2577307 - 2575730 - | ABC transporter related TERM 2166 2575913 - 2575928 + g 70 -11.8 -3.16564 | opp_overlap 2575912 TTCGCGGTACAGCAC GGCGGC CAGC GCCGCC TTCATACGCTCGCCG Pput_2266 2577841 - 2577479 - | hypothetical protein Pput_2267 2577990 - 2577838 - | hypothetical protein Pput_2268 2578408 - 2579484 + | cobalamin biosynthesis protein CobW cobN 2579488 - 2583249 + | cobaltochelatase Pput_2270 2583251 - 2584264 + | magnesium chelatase TERM 2167 2584304 - 2584258 - f 77 -3 -5.03145 | GAACTGGGCAAAAAA GCCCTGAGCATCC-CCCAGCCA CCAGC CAACGGGGCGGATGC-CAGAAC GGGCATAGGCAAGCA Pput_2271 2584342 - 2584932 + | hypothetical protein TERM 2168 2584998 - 2585023 + T 82 -13.4 -3.4072 | opp_overlap 2584992 2585001, overlap 2585001 AACAGAGAAGTTGTA CAAGTGCGTG ACCATG CACGCACTTG TTGTGCTGGCCGATA TERM 2169 2585001 - 2585020 + T 71 -9.3 -3.84406 | opp_overlap 2585001 2584992, overlap 2584998 AGAGAAGTTGTACAA GTGCGTG ACCATG CACGCAC TTGTTGTGCTGGCCG Pput_2272 2585305 - 2585039 - | hypothetical protein TERM 2170 2585631 - 2585621 - H 77 -3.2 -5.0538 | TTTTACTTCAAAAAA CCAA AAA CTGG CGCCAAGGATCGGTC Pput_2273 2585647 - 2586972 + | sigma-54 dependent trancsriptional regulator TERM 2171 2587121 - 2587161 + T 79 -12.7 -3.53012 | gap 1, opp_overlap 2587121 GTATTCGCGGGTAAA CCCGCTCCTAC-CGGG GAACCACAAG CCTGCGTAGGAGCGGG TTTACCCGCGAAAGG TERM 2172 2587161 - 2587121 - T 72 -10.5 -3.53444 | gap 1, opp_overlap 2587121 GTATTCGCGGGTAAA CCCGCTCCTAC-CGGG GAACCACAAG CCTGCGTAGGAGCGGG TTTACCCGCGAAAGG Pput_2274 2589308 - 2587308 - | peptidase U32 TERM 2173 2588612 - 2588643 + g 70 -10.2 -3.54029 | gap 1, overlap 2588615 2588641 AGCGCACGCCGGCAT CGACCAGGTCAGCCA GGT TGGC-GGTCTGGTTG TTGTCCTTCATCGAC TERM 2174 2588615 - 2588640 + g 71 -8.3 -3.90241 | gap 1, overlap 2588612 GCACGCCGGCATCGA CCAGGTCAGCCA GGT TGGC-GGTCTGG TTGTTGTCCTTCATC TERM 2175 2589463 - 2589447 - R 88 -15.1 -3.53012 | opp_overlap 2589441 CCTTGCGTCGCGAAA GGGCCGC AGA GCGGCCC CGGCGATCTTGCAGT TERM 2176 2589514 - 2589489 - R 79 -14.1 -2.75712 | gap 1, overlap 2589486 GCAGTCAGTCAACGA TGTTGGGG-GCG CTG CGCACCCCAACA AGCGCAGCTCAGCGC Pput_2275 2589903 - 2589523 - | endoribonuclease L-PSP Pput_2276 2590040 - 2590732 + | hypothetical protein Pput_2277 2590994 - 2590734 - | hypothetical protein Pput_2278 2591118 - 2592050 + | LysR family transcriptional regulator Pput_2279 2593303 - 2592152 - | acyl-CoA dehydrogenase domain-containing protein TERM 2177 2592540 - 2592514 - G 72 -13.6 -2.79796 | GGTCACGCGAGTAGA CCAGCGCCGCTT CGA ATGCGGCGCGGG CGATGCCCAAGGCCT Pput_2280 2594393 - 2593320 - | enoyl-CoA hydratase/isomerase TERM 2178 2594498 - 2594514 + H 74 -4.3 -4.79756 | overlap 2594499 CACAATCGACAATTG TGCAAGG GTA CCGTGCG TTTTTACCTTGTGTG TERM 2179 2597358 - 2597347 - g 71 -5.8 -4.30719 | GCGGTGTACAACAAA GTGG GCTA CCAC TTCCCGCAGGCACGC Pput_2281 2594722 - 2600559 + | hypothetical protein TERM 2180 2602516 - 2602482 - g 72 -4.2 -4.63218 | overlap 2602483 2602485 GTTTGCCGAAGAAAA CTACACCAGCCTGC GCGTTCT GCCGGCTGCTGCAA CCAACGCCTCCCAGA Pput_2282 2600578 - 2602554 + | YVTN beta-propeller repeat-containing protein Pput_2283 2602551 - 2603207 + | electron transport protein SCO1/SenC Pput_2284 2603204 - 2603869 + | electron transport protein SCO1/SenC TERM 2181 2603957 - 2603941 - g 79 -13.7 -3.53012 | TCTTGCGTCGCGAAA GGGCTGC GCA GCAGCCC CGGCAGTGGCAGCTT TERM 2182 2604008 - 2603984 - g 79 -11.3 -3.92522 | opp_overlap 2603988, overlap 2603986 2603987 GCTTAAGCGCAGAAA GAGGGGCGCGC TGC GCGCGCCTTTC GCGACGCAAGGCCGC TERM 2183 2604004 - 2603986 - g 75 -11.6 -3.55191 | opp_overlap 2603988, overlap 2603984 2603987 TTAAGCGCAGAAAGA GGGGCGCG CTG CGCGCGCC TTTCGCGACGCAAGG TERM 2184 2603988 - 2604004 + G 85 -15.1 -3.53012 | opp_overlap 2603986 2603987 2603984 AAGCGCAGAAAGAGG GGCGCGC TGC GCGCGCC TTTCGCGACGCAAGG TERM 2185 2604728 - 2604717 - g 71 -5.8 -4.25104 | GTTGCTCGAGCAAAA GCGA GTGT TCGC CCTGATCGCGCCATT TERM 2186 2605486 - 2605509 + G 74 -10.3 -3.74693 | gap 1 GGTGCCCATGTGGTG GCGGTGGCCC TGCCC GGGCCAC-GC TTTACTGCGGTCACC Pput_2285 2603875 - 2605554 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pput_2286 2605567 - 2606208 + | SurA domain-containing protein Pput_2287 2606461 - 2606991 + | response regulator receiver protein TERM 2187 2607117 - 2607090 - g 70 -9.9 -3.60792 | gap 1 CCCGGAATCTGCAAA GCCTGCAC-CGA CGTCT TCGCGCGCAGGC CCGCTCCCACAGGAT Pput_2288 2607052 - 2608848 + | type II secretion system protein E Pput_2289 2608832 - 2609611 + | hypothetical protein Pput_2290 2609613 - 2610155 + | hypothetical protein Pput_2291 2610142 - 2610705 + | hypothetical protein Pput_2292 2610705 - 2611211 + | hypothetical protein TERM 2188 2611364 - 2611324 - g 71 -10.9 -3.4582 | overlap 2611322 2611360 CCAGTTGATGAAAGA GGGCCAGTACGAGGCCGGC ATC GCCCGCCTGGAAGAGGCCC TGCGCGACGACCCGC Pput_2293 2611208 - 2613073 + | type II and III secretion system protein Pput_2294 2613070 - 2613549 + | Type II secretory pathway pseudopilin PulG-like protein Pput_2295 2613555 - 2613929 + | type II secretion system protein G Pput_2296 2613904 - 2614431 + | hypothetical protein Pput_2297 2614428 - 2614829 + | curli assembly protein CsgE Pput_2298 2614826 - 2615239 + | hypothetical protein Pput_2299 2615274 - 2616125 + | curli production assembly/transport component CsgG Pput_2300 2616194 - 2616430 + | hypothetical protein Pput_2301 2616773 - 2618683 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 2189 2618731 - 2618761 + G 74 -10.5 -3.72576 | gap 1, overlap 2618737 CCAGCGACCCTGTAC TCATGC-GCCAGGC GTTG GCCTGGCTGTATGG TTTCGTGCGCCCACA TERM 2190 2618737 - 2618754 + G 71 -12.7 -3.07227 | overlap 2618731 ACCCTGTACTCATGC GCCAGGC GTTG GCCTGGC TGTATGGTTTCGTGC Pput_2302 2618685 - 2620418 + | ABC transporter related TERM 2191 2620467 - 2620487 + G 71 -8.1 -3.91897 | GCCGGAGCAGGCCAA CGGCTTGCG GGA CGCCCGCCG TTTCTGGCTGGAAGA Pput_2303 2620408 - 2621085 + | hypothetical protein TERM 2192 2621866 - 2621894 + G 78 -5.2 -4.67755 | gap 1, overlap 2621867 2621868 2621884 GGGGGATGCCGCCAT GGCCGTTGACCCG CTGT CGGG-CAACGGGA TTTTTCAGTCGCTCT Pput_2304 2621078 - 2622370 + | FAD dependent oxidoreductase Pput_2305 2623905 - 2622592 - | hypothetical protein TERM 2193 2623902 - 2623920 + g 91 -3.1 -5.40014 | overlap 2623903 AGGCGAGTGTGTGCC TCATGGG TTTGC TCCATGG TTTTTATTGTTGTTT Pput_2306 2625538 - 2624045 - | aldehyde dehydrogenase Pput_2307 2625879 - 2627507 + | hypothetical protein TERM 2194 2627702 - 2627741 + G 95 -19.4 -3.53091 | gap 1 CTTGCGCCAGCAGGG CTGCTCGGCCGAGGAGCTG ATG CAGCGCCTTGGCC-AGCAG TTTGCCGGCGACGAT Pput_2308 2627556 - 2628986 + | radical SAM domain-containing protein TERM 2195 2629044 - 2629017 - g 76 -9.8 -3.9461 | gap 1 GCCCCTGAACAACAA GGCGCGCATCCTG GAG CAGGCCGC-CGCC GAAGACCGTGTCGAA Pput_2309 2628988 - 2629311 + | quinohemoprotein amine dehydrogenase, gamma subunit Pput_2310 2629343 - 2630464 + | hypothetical protein TERM 2196 2631089 - 2631114 + G 73 -12.5 -3.21912 | TGCGTGGCGTGGTCA GCCTGGCGCTG TCGC CACCGCCGGGC TTCCTGGCTTGGCAC Pput_2311 2630599 - 2632272 + | acyl-CoA synthetase mobA 2632982 - 2632407 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 2197 2633017 - 2632989 - R 100 -14.6 -4.75372 | opp_overlap 2633009 2633010 ATCAGGCATGAAAAA GGGTTCCGGGCA GTCAT TGCCGGGAACCC TCCCATTTCACGCGG Pput_2313 2636172 - 2633044 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pput_2314 2637359 - 2636184 - | RND family efflux transporter MFP subunit Pput_2315 2637605 - 2638306 + | two component transcriptional regulator Pput_2316 2638313 - 2639611 + | integral membrane sensor signal transduction histidine kinase Pput_2317 2639855 - 2640286 + | transmembrane pair domain-containing protein TERM 2198 2640416 - 2640400 - f 71 -11.5 -3.06183 | opp_overlap 2640400 CGTACGTGCACCGAA CCCGCCC TGG AGGCGGG TTTTTTCTCTCTGAC TERM 2199 2640400 - 2640416 + F 100 -10.8 -5.4251 | opp_overlap 2640400 CGTACGTGCACCGAA CCCGCC CTGGA GGCGGG TTTTTTCTCTCTGAC TERM 2200 2641208 - 2641252 + G 70 -12 -3.14344 | overlap 2641212 TTTGCCGATGGCGTG GCGGTGGCGCAGATCGGCGC CCATT GCTTCGAGCTGTGCCGCCAC TTCGTCGACGAGGTG Pput_2318 2640467 - 2642026 + | threonine dehydratase TERM 2201 2642091 - 2642115 + T 76 -13.5 -2.78384 | TTGTTCGCAGCGTGA TCGCCCGGTCC AAA GGGCAGGGCGA TCTCCTGCAAGAAAC Pput_2319 2643334 - 2642153 - | hypothetical protein TERM 2202 2643170 - 2643202 + g 74 -10 -3.767 | gap 2, opp_overlap 2643181, overlap 2643172 GGCATCGTTGCGGCA GT-CGCAA-GCCAGCC ACT GGTTGGCGTTGCGTAC TTTCATCAGTAGCTG TERM 2203 2643172 - 2643199 + g 71 -12.8 -2.97667 | gap 1, opp_overlap 2643181, overlap 2643170 CATCGTTGCGGCAGT CGCAA-GCCAGCC ACT GGTTGGCGTTGCG TACTTTCATCAGTAG Pput_2320 2643865 - 2643386 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2204 2643886 - 2643903 + r 83 -14.1 -3.24825 | overlap 2643884 ACTCTCCTGTGCAAT GGGCGCC GAAA GGCGCCC TGTTGCTTAGAGTCG Pput_2321 2645595 - 2643976 - | aldehyde dehydrogenase Pput_2322 2646137 - 2647201 + | hypothetical protein TERM 2205 2647326 - 2647342 + F 74 -7.2 -4.19953 | overlap 2647310 AGTCGGGCGCGACCC CGGCCG TTCCT CGGCTG TTTTCGCCTTGCCTG TERM 2206 2647564 - 2647536 - g 70 -7.4 -4.07568 | gap 1, overlap 2647555 CGGCTGGGTGGAAAA GCGGCGACCGATC TCAA GAGCG-TCGCCAC CAAGTGCTGGGACAT Pput_2323 2647431 - 2648549 + | hypothetical protein TERM 2207 2649264 - 2649236 - g 77 -13.8 -3.30441 | gap 1, opp_overlap 2649237, overlap 2649237 GACCAGCGTGTACAA CTGGCCCGGGCGC AGTT GCGCCAGGGCC-G TTCAATTGCTGAAGT TERM 2208 2649237 - 2649264 + G 86 -16.2 -3.20901 | opp_overlap 2649236 2649237 ACCAGCGTGTACAAC TGGCCCGGGCGC AGTT GCGCCAGGGCCG TTCAATTGCTGAAGT TERM 2209 2649264 - 2649237 - g 71 -14 -2.5805 | opp_overlap 2649237, overlap 2649236 ACCAGCGTGTACAAC TGGCCCGGGCGC AGTT GCGCCAGGGCCG TTCAATTGCTGAAGT Pput_2324 2648597 - 2649445 + | AraC family transcriptional regulator Pput_2325 2650057 - 2649410 - | lysine exporter protein LysE/YggA Pput_2326 2650283 - 2651854 + | integral membrane protein TerC Pput_2327 2652704 - 2651817 - | transporter DMT superfamily protein Pput_2328 2654324 - 2652738 - | diguanylate phosphodiesterase Pput_2329 2654623 - 2655699 + | 4-hydroxyphenylpyruvate dioxygenase Pput_2330 2656526 - 2655720 - | hypothetical protein TERM 2210 2656051 - 2656024 - G 74 -5.6 -4.42653 | gap 1 AGCCCATCCAGAAAA CCATCCAG-CTCG TTG CGAATCTGCATGG CATAGGCTGTCACGA Pput_2331 2657342 - 2656656 - | ThiJ/PfpI domain-containing protein TERM 2211 2659529 - 2659548 + G 72 -7.2 -4.18494 | gap 1, overlap 2659521 2659520 TCGATCAGCCGGGCA CGGCATTGT TGA ACAA-GCCG TTTTCGCTGGCGCTG Pput_2332 2657536 - 2659599 + | PAS/PAC sensor hybrid histidine kinase Pput_2333 2661222 - 2659606 - | histidine kinase Pput_2334 2662500 - 2661301 - | TPR repeat-containing protein TERM 2212 2662532 - 2662507 - R 100 -17.5 -5.56264 | GGCAAACATAAAAAA GCCCCGCGGGC CATG GCCTGCGGGGC AAACGGTTGGGGGAG TERM 2213 2662621 - 2662584 - R 74 -12.8 -2.73681 | opp_overlap 2662578 GAGGCAGTGGAATCA GTGTGC-GCTGGCCACCG TCTC CGGTTGCCAGCCGC-CAC CCAGGGCCTTGTAGA Pput_2335 2663996 - 2662581 - | RND efflux system outer membrane lipoprotein Pput_2336 2667172 - 2663993 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pput_2337 2668426 - 2667185 - | RND family efflux transporter MFP subunit Pput_2338 2669806 - 2668616 - | type II secretion system protein Pput_2339 2670243 - 2669818 - | general secretion pathway protein G TERM 2214 2670733 - 2670720 - g 71 -9.5 -3.69354 | GGCTACAACCCCAAA GCCCG TTCG CGGGC GGGTGCAGTGGGGTT TERM 2215 2670915 - 2670938 + G 74 -11.6 -3.53012 | overlap 2670925 GGCCCGGATGCTGTA CTGCGGCGCG GTGC CGTGCCGCCG TTTGCCGAGACCCGG Pput_2340 2670366 - 2671022 + | lytic transglycosylase, catalytic Pput_2341 2671197 - 2672648 + | integral membrane sensor signal transduction histidine kinase TERM 2216 2673910 - 2673936 + GF 75 -13.7 -2.64616 | TCAGCCAGGTCGACC GCATGTCGCGC TGGGT GCGCGACCTGC TGGTGTCGCTACGCC Pput_2342 2672955 - 2674448 + | integral membrane sensor signal transduction histidine kinase Pput_2343 2674417 - 2675844 + | two component, sigma54 specific, Fis family transcriptional regulator Pput_2344 2676161 - 2675859 - | hypothetical protein Pput_2345 2677600 - 2676248 - | gluconate transporter Pput_2346 2678251 - 2677712 - | carbohydrate kinase Pput_2347 2678458 - 2679477 + | LacI family transcriptional regulator Pput_2348 2679691 - 2681013 + | methyl-accepting chemotaxis sensory transducer Pput_2349 2684260 - 2680979 - | Hpt sensor hybrid histidine kinase TERM 2217 2681507 - 2681490 - G 76 -12.7 -3.46982 | overlap 2681488 GTCACACCAAGAATA CGGCCTG CTGG CAGGCCG CGTTCGCCCTCCAGG Pput_2350 2684888 - 2684274 - | two component LuxR family transcriptional regulator Pput_2351 2685352 - 2685110 - | hypothetical protein Pput_2352 2686171 - 2685419 - | precorrin-4 C11-methyltransferase TERM 2218 2686207 - 2686191 - R 72 -2.2 -5.00884 | overlap 2686203 AGTCCTGGCAAAAAA GAGGGT ACGAA ACGCTC AGCAGGCCAGGGCGA Pput_2353 2686592 - 2686206 - | hypothetical protein Pput_2354 2687278 - 2686592 - | cobalt transporter, subunit CbtA Pput_2355 2687476 - 2687288 - | cobalt transporter, subunit CbtB TERM 2219 2687606 - 2687582 - R 71 -11.3 -3.14132 | CGGGGTGTTCATGAA CGCCAGGCCGG TCT CCGGGCTTGCG AGGAAGAGCTGGGCT Pput_2356 2688391 - 2687912 - | GCN5-related N-acetyltransferase Pput_2357 2688515 - 2689144 + | lysine exporter protein LysE/YggA Pput_2358 2689166 - 2690038 + | alpha/beta hydrolase fold TERM 2220 2690568 - 2690536 - g 77 -13.3 -3.61398 | overlap 2690559 GCCGGCGCGGAACAA GCGTGCAGCGGCTGG CTA CCAGACGCTGCTGGC CGGCGACATTCCGGT Pput_2359 2690135 - 2691022 + | pirin domain-containing protein Pput_2360 2691319 - 2691579 + | hypothetical protein TERM 2221 2691590 - 2691624 + T 75 -12.9 -3.03124 | gap 1, opp_overlap 2691550 2691549 CCTGAACGCGCCTGT CGTGC-CCCGGTCAGT CCAG GCTGGCCGGGCGTACG TATTCCGGCATCAGG Pput_2361 2692214 - 2691600 - | hypothetical protein Pput_2362 2692588 - 2692301 - | hypothetical protein Pput_2363 2693435 - 2692758 - | 2OG-Fe(II) oxygenase TERM 2222 2692889 - 2692911 + g 93 -19.2 -3.29144 | opp_overlap 2692882 2692877 CGAGCACATCGCCGT GGCTCAGCGC AAT GCGCTGAGCC TTGTCGGCACGCTGC TERM 2223 2693551 - 2693515 - R 86 -5.8 -5.1523 | overlap 2693516 GGGATAACAGAAAAA GGAACCGCGGCACC AGGGAGAGA AGCACCGCGGTTCA AGGGGGAGCGGTTTA Pput_2364 2695060 - 2693564 - | curlin-associated protein Pput_2365 2695499 - 2695026 - | curlin-associated protein Pput_2366 2697746 - 2695515 - | hypothetical protein TERM 2224 2696667 - 2696694 + g 91 -17.8 -3.15544 | gap 1 GAGCTTGCTCGAGAG CGCAGTCGGCTGG GTG CC-GCCGACTGCG TTGCTGGCGGTGACA Pput_2367 2699107 - 2697779 - | hypothetical protein Pput_2368 2700489 - 2699368 - | hypothetical protein Pput_2369 2703161 - 2700489 - | hypothetical protein TERM 2225 2700540 - 2700555 + g 77 -2.6 -5.00616 | overlap 2700541 CAGCTCTTCTTGTTC TTCAAA CGGT TTTGAG TTTTTTGCAAGGCGG Pput_2370 2704054 - 2703176 - | hypothetical protein Pput_2371 2706231 - 2704054 - | Rhs element Vgr protein Pput_2372 2707093 - 2706245 - | hypothetical protein TERM 2226 2706505 - 2706524 + g 79 -13.6 -3.46068 | overlap 2706504 CGCTGAGGATTTCAT CGCCCTTG GGGT CAAGGGCG TATTTGCCTTGCAGG TERM 2227 2706991 - 2707014 + g 72 -8 -4.20552 | overlap 2706985 TTGCGTATTCAGGAC CCGCGCCGTC AGGA GGCGGTGGGG TTTCGTTTATGTCTT TERM 2228 2707214 - 2707243 + r 74 -10.9 -3.6445 | opp_overlap 2707218, overlap 2707218 TTTTTGTGGGAGATT GAAACTTCCTAAA GCAT TGTAGGAAGTTTC TTTGGAAGTTGTTGT TERM 2229 2707218 - 2707239 + r 72 -5.9 -4.43877 | opp_overlap 2707218, overlap 2707214 TGTGGGAGATTGAAA CTTCCTAAA GCAT TGTAGGAAG TTTCTTTGGAAGTTG Pput_2373 2708143 - 2707376 - | PAP2 (acid phosphatase) superfamily protein-like protein TERM 2230 2707691 - 2707734 + g 81 -10.5 -4.15565 | gap 2 CCGGGGCTGCGAACC GCCATA-CAGCGTG-GTTTCC ACAG GGCAATACACGCTGGTATGGC TTTTCAGGTAGTGAA Pput_2374 2708835 - 2708146 - | putative phosphohistidine phosphatase, SixA TERM 2231 2708290 - 2708276 - G 82 -11.4 -4.07568 | opp_overlap 2708267 2708282 GCTGTTGCGCTAAAA GGCGCT TTG AGCGCC TGCTCCAGTTGCTCC Pput_2375 2709114 - 2709860 + | gluconate 2-dehydrogenase acceptor subunit Pput_2376 2709864 - 2711648 + | gluconate 2-dehydrogenase acceptor subunit TERM 2232 2711644 - 2711624 - f 71 -4.5 -4.63527 | overlap 2711625 GCAGTACCTGAAAAA CCCCGGTCC GTT GGTCCAGGC TTGAGGAGCGATGAG Pput_2377 2711655 - 2712908 + | gluconate 2-dehydrogenase acceptor subunit Pput_2378 2713175 - 2714194 + | regulatory protein, LacI TERM 2233 2714200 - 2714219 + F 71 -11.4 -3.14931 | opp_overlap 2714200 2714202 ACCCCAGTAAGAAAA CGGCAGGC TTGT GCCTGCTG TTGATCAAAAATGAA TERM 2234 2714219 - 2714200 - f 86 -9.2 -4.71828 | opp_overlap 2714200, overlap 2714202 ACCCCAGTAAGAAAA CGGCAGGC TTGT GCCTGCTG TTGATCAAAAATGAA TERM 2235 2714244 - 2714231 - f 72 -3.9 -4.72272 | GCTGTTGATCAAAAA TGAAA CCGG TTTCA CAAGGATAAGAACAA TERM 2236 2714666 - 2714690 + G 74 -4.9 -4.59109 | overlap 2714667 2714668 TCAGACCGCACAAGG TGGCAGGATCG AAC CGATGCTGCAG TTTTTCCACCGTGTC Pput_2379 2714259 - 2715038 + | xylose isomerase domain-containing protein TERM 2237 2715587 - 2715610 + GF 76 -9.4 -4.08216 | opp_overlap 2715586 2715585 TGCGTGAAATCAATG CCCTGGCGGC CAAG GCCGACTGGG TTTTACCGGGGCTGG Pput_2380 2715031 - 2715981 + | ribokinase-like domain-containing protein Pput_2381 2715944 - 2717332 + | major facilitator transporter Pput_2382 2717343 - 2718305 + | gluconate 2-dehydrogenase TERM 2238 2718347 - 2718290 - T 70 -9.8 -3.53444 | opp_overlap 2718300 TGAGCGGCCGGTAAA CCTGGTCAACGGCTGACGCG-CCCCGGT TCCC ACAGGGGCCGCG-CAGCCTTTGAAACGG TCAGCGGCAGTTGCC TERM 2239 2718300 - 2718337 + T 86 -14.2 -3.54424 | opp_overlap 2718290 GTAAACCTGGTCAAC GGCTGACGCG-CCCCGGT TCCC ACAGGGGCCGCG-CAGCC TTTGAAACGGTCAGC Pput_2383 2719313 - 2718348 - | deoxyribonuclease I Pput_2384 2719711 - 2719328 - | hypothetical protein Pput_2385 2722205 - 2719842 - | surface antigen (D15) TERM 2240 2721535 - 2721554 + g 72 -4.2 -4.57073 | gap 1, overlap 2721537 TAGTAGGAACGCAGG CGCTCCAGG TCA CC-GGAGAG TTTTTCACGGGCGTA Pput_2386 2722342 - 2723103 + | two component transcriptional regulator TERM 2241 2723519 - 2723531 + G 71 -5.5 -4.27316 | overlap 2723506 2723504 GAGCGCGCTGTTCGC GCTGT TGT GCAGC TTTTACCTTACCCGG TERM 2242 2723566 - 2723593 + G 79 -8.3 -4.3467 | overlap 2723567 TGACCTGGCTGCGCG AGGCCATGGGC CAGGTT GCCCAAGGCCG TTTTGATGTGCGGGT TERM 2243 2723567 - 2723592 + G 70 -11.8 -3.2032 | overlap 2723566 GACCTGGCTGCGCGA GGCCATGGGC CAGGTT GCCCAAGGCC GTTTTGATGTGCGGG Pput_2387 2723100 - 2724362 + | integral membrane sensor signal transduction histidine kinase Pput_2388 2725350 - 2724355 - | aldo/keto reductase Pput_2389 2726298 - 2725447 - | LysR family transcriptional regulator Pput_2390 2727545 - 2726361 - | major facilitator transporter TERM 2244 2727270 - 2727246 - G 70 -9.9 -3.56568 | overlap 2727247 GAACGAGGGGGCAAA GGCCGTGGCCA GGT TGCCCACGGCA TACAGCAGCATCAAC TERM 2245 2727269 - 2727247 - G 72 -13.4 -2.73619 | overlap 2727246 AACGAGGGGGCAAAG GCCGTGGCCA GGT TGCCCACGGC ATACAGCAGCATCAA TERM 2246 2727600 - 2727650 + H 77 -10.2 -3.79747 | opp_overlap 2727597 2727601, overlap 2727601 GATAATAGTCAATCG ATGGCTGCAACGTCGAGGATGCTG CCC CGTCTGCCGCGACGTTGCAGCCCG TTTCCTGCTCAGTGC TERM 2247 2727601 - 2727649 + H 76 -13.7 -2.87527 | opp_overlap 2727601 2727597, overlap 2727600 ATAATAGTCAATCGA TGGCTGCAACGTCGAGGATGCTG CCC CGTCTGCCGCGACGTTGCAGCCC GTTTCCTGCTCAGTG TERM 2248 2728116 - 2728142 + G 74 -5 -4.54727 | opp_overlap 2728113 2728116 TTCAACCAGCAACAG CCCGAGCTGC CGGTAGC GCTGGTCGGG TTTTCCTTTGGGGCC Pput_2391 2727813 - 2728472 + | alpha/beta fold family hydrolase-like protein Pput_2392 2729338 - 2728457 - | LysR family transcriptional regulator TERM 2249 2729640 - 2729607 - g 73 -6.7 -4.25104 | gap 1 TCCCGGTGAGGAAAA CCTCGACCTGCTC-GA ATC CCTGCGCAAGTCGAAG ATCAAGCTGGTACTG TERM 2250 2729993 - 2729973 - g 83 -6.7 -4.89477 | overlap 2729974 GGCCGAAGAAGAAAA GCCGGGTGC GGT GCACCTGGA GCTGCCGGAAGACAT Pput_2393 2729524 - 2731167 + | acetolactate synthase TERM 2251 2731262 - 2731219 - T 93 -16.8 -3.53012 | opp_overlap 2731221 2731258, overlap 2731221 GCCTGGTGCTGCAAA GAGGCCCGTATAGCCGAC GGTAATGT GTCGGCTTTACGGGCCTT TTCGCAATACAAGGC TERM 2252 2731221 - 2731260 + T 100 -20.1 -4.11216 | opp_overlap 2731221 2731219, overlap 2731258 CTGGTGCTGCAAAGA GGCCCGTATAGCCGACG GTAATG TGTCGGCTTTACGGGCC TTTTCGCAATACAAG TERM 2253 2731260 - 2731221 - T 100 -19.4 -3.34398 | opp_overlap 2731221 2731258, overlap 2731219 CTGGTGCTGCAAAGA GGCCCGTATAGCCGAC GGTAATGT GTCGGCTTTACGGGCC TTTTCGCAATACAAG Pput_2394 2733837 - 2731294 - | putative GAF sensor protein TERM 2254 2731763 - 2731753 - G 78 -6.8 -4.59773 | CGGGATTCTGAAAAA GCCT TGC AGGC CTTCGGGGTGATATT Pput_2395 2734064 - 2734681 + | hypothetical protein Pput_2396 2735162 - 2734722 - | AsnC family transcriptional regulator TERM 2255 2735186 - 2735217 + H 83 -16 -3.01712 | opp_overlap 2735179 CTTGATAAGCTTGCC GTCATTATGCCGGT CGGG ACCGGCATAATGCC TGTTGCGCCCGACCG Pput_2397 2735306 - 2738353 + | hypothetical protein TERM 2256 2738360 - 2738402 + T 71 -11.9 -2.87132 | gap 1, opp_overlap 2738331 2738332 2738354 CTGAAATAGCGTTTC AGCGCG-GGCAGGGCGTGCG CATG TGCACGCCCTGCGGCGCACC TATCTGGCGAGCCGG Pput_2398 2739556 - 2738432 - | MscS mechanosensitive ion channel TERM 2257 2739488 - 2739467 - G 71 -10.9 -3.40163 | gap 1 GACCAGGAAGACTAA GGTGGCGACT GTC AG-CGCCACC AACAGATTGAGAATG Pput_2399 2740125 - 2739655 - | MarR family transcriptional regulator TERM 2258 2740222 - 2740212 - H 71 -4.6 -4.57073 | GAGGTTCCGCAAAAA GGCA GCG CGCC TAACCATGGAACAAA Pput_2400 2740323 - 2741153 + | p-hydroxycinnamoyl CoA hydratase/lyase TERM 2259 2741360 - 2741387 + G 85 -14.8 -3.55444 | overlap 2741361 ACTGGCCGATGCCGA TGCCGCGGTGGC TGCT GCCAGCGCGGCG TTTCCGGCCTGGGCC TERM 2260 2741361 - 2741386 + G 81 -16.1 -2.73124 | overlap 2741360 CTGGCCGATGCCGAT GCCGCGGTGGC TGCT GCCAGCGCGGC GTTTCCGGCCTGGGC Pput_2401 2741229 - 2742677 + | aldehyde dehydrogenase TERM 2261 2742736 - 2742706 - g 84 -16.2 -3.04263 | gap 1, opp_overlap 2742706, overlap 2742709 AGGCCACTGGCAAGA TGACCGCCGCCCG TCATTT CGGGCGGCGG-CA GGATGTACAACAAGA TERM 2262 2742734 - 2742709 - g 87 -19 -2.74523 | opp_overlap 2742706, overlap 2742706 CCACTGGCAAGATGA CCGCCGCCCG TCATTT CGGGCGGCGG CAGGATGTACAACAA TERM 2263 2742981 - 2743003 + G 78 -14.9 -3.06915 | ACTTTCATCGCGGCA CGCCAGGCA GACGG TGCCTGGCG TTCGATCAGCTACGT Pput_2402 2742705 - 2744651 + | feruloyl-CoA synthase Pput_2403 2744648 - 2745889 + | acetyl-CoA acetyltransferase Pput_2404 2745904 - 2747649 + | acyl-CoA dehydrogenase domain-containing protein Pput_2405 2748655 - 2747630 - | hypothetical protein Pput_2406 2750256 - 2748652 - | sulfatase TERM 2264 2749392 - 2749434 + g 82 -3.4 -5.14163 | gap 2, overlap 2749394 2749395 CGGCGTCCAGCGCCG TGACCATGGCCGCATACACC TCCAT GGTGCGTGCGGAC-TGG-CG TTTTTGTTCATCGCT Pput_2407 2750578 - 2751969 + | hypothetical protein Pput_2408 2752004 - 2753245 + | putative 3-hydroxyphenylpropionic transporter MhpT Pput_2409 2754407 - 2753262 - | diguanylate cyclase Pput_2410 2756849 - 2754798 - | TonB-dependent receptor TERM 2265 2755243 - 2755287 + g 75 -14.9 -2.70932 | overlap 2755243 2755246 ACCTGCAGGTCATAG CCCCAGCGGCGTGTCTCGC CGACGTT GTCCGACTCGCCGCTGGGG TCGTTCAGACGGCGG Pput_2411 2757306 - 2757094 - | hypothetical protein Pput_2412 2759520 - 2757367 - | TonB-dependent siderophore receptor Pput_2413 2759981 - 2759592 - | hypothetical protein Pput_2414 2761277 - 2760384 - | LysR family transcriptional regulator Pput_2415 2761379 - 2761792 + | glyoxalase/bleomycin resistance protein/dioxygenase Pput_2416 2761950 - 2763266 + | sodium:dicarboxylate symporter TERM 2266 2763423 - 2763467 + T 76 -13.5 -2.83715 | overlap 2763427 2763431 TCATTCCGAACGCCT CCAACTGCCATACCTCGGCCG TCA CGGCCGAGGTAGGTCGCTTAG TCTACTCGTGGTGCG TERM 2267 2763427 - 2763463 + T 78 -12.9 -3.30443 | overlap 2763423 2763431 TCCGAACGCCTCCAA CTGCCATACCTCGGCCG TCA CGGCCGAGGTAGGTCGC TTAGTCTACTCGTGG TERM 2268 2763431 - 2763459 + T 91 -18.9 -2.5919 | overlap 2763427 2763423 AACGCCTCCAACTGC CATACCTCGGCCG TCA CGGCCGAGGTAGG TCGCTTAGTCTACTC Pput_2418 2764191 - 2763469 - | hypothetical protein Pput_2419 2766296 - 2764206 - | TonB-dependent siderophore receptor Pput_2420 2767530 - 2766583 - | putative GTP cyclohydrolase Pput_2421 2769283 - 2768033 - | Bcr/CflA subfamily drug resistance transporter Pput_2422 2770572 - 2769280 - | 3-oxoacyl-(acyl carrier protein) synthase II Pput_2423 2773737 - 2770645 - | acriflavin resistance protein TERM 2269 2773499 - 2773515 + g 72 -4.4 -4.58283 | gap 1, opp_overlap 2773499 2773500 GTACGGTCATACCAA CGCA-GC TCCT GCATGCG TTTTTCCAACGGTTC Pput_2424 2774837 - 2773734 - | RND family efflux transporter MFP subunit Pput_2425 2775529 - 2774915 - | TetR family transcriptional regulator Pput_2426 2775611 - 2777074 + | RND efflux system outer membrane lipoprotein Pput_2427 2778521 - 2777193 - | short chain dehydrogenase TERM 2270 2777265 - 2777277 + g 72 -4.1 -4.62471 | overlap 2777259 2777263 AGCTGCACTCACCCA CAACG GTG TGTTG TTTTTGCGGCTTCGC Pput_2428 2778790 - 2778557 - | hypothetical protein Pput_2429 2780011 - 2778809 - | alcohol dehydrogenase TERM 2271 2779647 - 2779657 + g 100 -4.6 -5.5112 | AAGAGTGCGGCTCCG GGCG GGA TGCC TTTTTTGTTGATGAG TERM 2272 2779753 - 2779733 - G 77 -3.9 -4.82901 | overlap 2779737 2779738 GTGTTGGCAGAAAAA GCAACTGCC GCA GGCAATGAC GAAAGGAACCACCAC Pput_2430 2780445 - 2780089 - | hypothetical protein Pput_2431 2781204 - 2780701 - | CinA domain-containing protein Pput_2432 2781410 - 2781568 + | hypothetical protein Pput_2433 2784234 - 2782036 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Pput_2434 2785232 - 2784231 - | molybdopterin dehydrogenase, FAD-binding Pput_2435 2785756 - 2785229 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Pput_2436 2787642 - 2785855 - | pyruvate decarboxylase TERM 2273 2788116 - 2788144 + G 86 -16.1 -3.25015 | TGCCGGCAGGCACTG GTCATCGCCGCAT CGA ATGCAGCGATGAC TTCCTGGTGGTTGGC Pput_2437 2787791 - 2788309 + | double-stranded beta helix domain-containing protein Pput_2438 2788732 - 2788352 - | hypothetical protein Pput_2439 2789351 - 2788833 - | hypothetical protein TERM 2274 2789851 - 2789861 + G 71 -5.4 -4.4017 | GTTTTCGTTATTGCG CTGA TCT TCAG TTTTCTGGCCATTCC Pput_2440 2789554 - 2790537 + | integral membrane protein TerC Pput_2442 2790861 - 2791274 + | hypothetical protein TERM 2275 2791603 - 2791572 - g 80 -5.9 -4.74801 | gap 1, overlap 2791573 CAACTTGAGCAAAAA TTGGCCGCCCAGTT GGCCG AACTGGA-GGCCAT GAAAGGCAGCCGTGA Pput_2443 2791533 - 2791895 + | hypothetical protein TERM 2276 2791941 - 2791919 - T 100 -12.8 -5.54264 | opp_overlap 2791919 2791923 AAAGACGCAAAAAAA GAAACGACCT CAA AGGCCGTTTC TTTTGCCTGTGGATG TERM 2277 2791919 - 2791941 + T 86 -10.6 -4.24204 | opp_overlap 2791919, overlap 2791923 AAAGACGCAAAAAAA GAAACGACCT CAA AGGCCGTTTC TTTTGCCTGTGGATG TERM 2278 2791923 - 2791937 + T 76 -5.6 -4.70515 | opp_overlap 2791919, overlap 2791919 ACGCAAAAAAAGAAA CGACCT CAA AGGCCG TTTCTTTTGCCTGTG Pput_2444 2793029 - 2792121 - | extracellular solute-binding protein Pput_2445 2794418 - 2793078 - | putrescine transporter TERM 2279 2794379 - 2794396 + g 100 -7 -5.64006 | CTGTCACCAGCGTCG TGAGCC CGACCA GGCTCA TTTTTTTGCTTGAAT TERM 2280 2795095 - 2795108 + r 75 -2.3 -5.12617 | opp_overlap 2795095 AATCTCGAAAGTAAA TCGAC CTAG GCCGA TTTTTTGCCTCCTTC TERM 2281 2795762 - 2795789 + r 77 -11.2 -3.61902 | TACACCCGTTTAATT TGCCTGGCGCGC GGGT GCACGCCAGCCA TTCTGTATCCTCAAA Pput_2447 2796847 - 2796419 - | protein of unknown function DUF395, YeeE/YedE Pput_2448 2797604 - 2796849 - | protein of unknown function DUF395, YeeE/YedE Pput_2449 2798897 - 2797716 - | sodium/hydrogen exchanger TERM 2282 2798400 - 2798368 - G 76 -7.7 -4.27316 | overlap 2798397 CCCGCCAAGGCAAAA GGCATCGTCGAGTGA GCC TCCGTCAACAATGCC AACAGCAAGAGTAGT Pput_2450 2799213 - 2799785 + | phosphoribosyltransferase Pput_2451 2800665 - 2799787 - | UspA domain-containing protein TERM 2283 2800016 - 2799973 - G 75 -11.8 -3.61517 | gap 1 ACCTTCGCTGAAGAA TCGATGGTTGTGGGCGATGCC GTG GGCATCGGCCA-ACGCATCGA ACGGCAACTGCAGCG Pput_2453 2801774 - 2800884 - | UspA domain-containing protein TERM 2284 2801879 - 2801901 + r 74 -4.9 -4.83615 | gap 1, overlap 2801886 GCTACCAGCATCCGG TCAA-CGCCG CCCT TGGCGCTTGA TTTTTATCAAGCGTG Pput_2454 2804218 - 2801936 - | heavy metal translocating P-type ATPase TERM 2285 2803323 - 2803309 - G 74 -2.7 -4.82901 | overlap 2803310 2803311 TCTTGTCGAGAAAAA CCTGG CGGAT CCCGG CGAGCGCCTCCAGTA Pput_2455 2804479 - 2804225 - | hypothetical protein TERM 2286 2804521 - 2804546 + H 75 -9.7 -3.85698 | gap 1 CACGCTAAGTATCGA TGGC-GGCGTGC GCC GCACGCCTGACA TTTGTCAACCGCGAC TERM 2287 2804998 - 2804986 - g 74 -4.7 -4.58395 | opp_overlap 2804958 GTCACCGTGCAAAAA GGGAC GGT GACCC TGGAAGGCCAGCTCG Pput_2456 2804668 - 2805315 + | transport-associated Pput_2457 2805336 - 2807183 + | ATP-dependent metalloprotease FtsH Pput_2458 2807212 - 2807637 + | Ion transport 2 domain-containing protein Pput_2459 2810020 - 2807645 - | putative phosphoketolase TERM 2288 2808594 - 2808578 - G 81 -7.9 -4.4261 | TTCGTAACAGGAAAA CAGGCCA TGG CGGCCCG TCAGCAGGTACCCCT Pput_2460 2810910 - 2810350 - | heat shock protein Hsp20 TERM 2289 2810826 - 2810858 + g 71 -12.7 -3.05384 | overlap 2810831 AGGGCCGCCACAGCT CCGAAGGTTCGACGC TGG GCGGCGAAGCTTTGG TTGGCTGGGGGGCGG TERM 2290 2811627 - 2811673 + G 71 -10.9 -3.40522 | CTTTCCGCCCGGACA CGGTG-TACTGTTGCGCGCCGCC ACA GGTGGCGCGCCA-AGTGGCACGG TTGTGCTGGCAAACT Pput_2461 2811101 - 2811835 + | hypothetical protein Pput_2462 2812535 - 2811804 - | CRP/FNR family transcriptional regulator TERM 2291 2812916 - 2812901 - g 75 -4 -4.6902 | gap 1 CGAGAACGCGAAAAA GCC-TTC ATC GAACGGC TGTCGCCCGAATCGC Pput_2463 2812760 - 2813329 + | GCN5-related N-acetyltransferase TERM 2292 2813963 - 2814017 + G 77 -13.4 -3.28791 | GTTGCCTGACGCCTT GGCAGGACGACCCCGCGCTGTACGGG CAC TTTGTCGAGCGCGGTGGCGTCATGCC TTGTGAGCAACCGGT Pput_2464 2813389 - 2814756 + | erythromycin esterase Pput_2465 2815496 - 2814804 - | phosphoribosyltransferase Pput_2466 2816204 - 2815560 - | hypothetical protein Pput_2467 2817592 - 2816225 - | beta-lactamase domain-containing protein Pput_2468 2818509 - 2817583 - | UspA domain-containing protein Pput_2469 2818692 - 2819240 + | GCN5-related N-acetyltransferase TERM 2293 2819265 - 2819246 - T 100 -13.6 -5.00616 | opp_overlap 2819246 2819249 GCGGCCTTGAAAAAA CAAGGCCC TTGC GGGCCTTG TGCTTCAGCCTTTGG TERM 2294 2819246 - 2819265 + T 76 -13.6 -2.74514 | opp_overlap 2819246, overlap 2819249 GCGGCCTTGAAAAAA CAAGGCCC TTGC GGGCCTTG TGCTTCAGCCTTTGG TERM 2295 2819249 - 2819262 + T 70 -9.5 -3.51597 | opp_overlap 2819246, overlap 2819246 GCCTTGAAAAAACAA GGCCC TTGC GGGCC TTGTGCTTCAGCCTT Pput_2470 2820196 - 2819270 - | UspA domain-containing protein Pput_2471 2820736 - 2821557 + | CRP/FNR family transcriptional regulator Pput_2472 2821542 - 2822780 + | membrane protein-like protein Pput_2473 2823824 - 2822820 - | PaaX family transcriptional regulator Pput_2474 2824420 - 2823821 - | phenylacetic acid degradation protein PaaY Pput_2475 2824767 - 2825540 + | enoyl-CoA hydratase-isomerase TERM 2296 2825950 - 2825969 + G 76 -10.7 -3.73072 | GCCTGCGACCTGGTG CTGGCCG CCCGCT CGGCCAG TTTCATCCAGGCCTT Pput_2476 2825575 - 2826366 + | enoyl-CoA hydratase TERM 2297 2826506 - 2826481 - g 79 -13.9 -3.41527 | CAAGCTCTACGACAA CCGCCCGGGTG CGGC CGCCCAGGCGG TGACGGGTATCGATC Pput_2477 2826368 - 2827885 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 2298 2828208 - 2828196 - g 70 -10.5 -3.58269 | overlap 2828188 GAAGTCAGCCGCAAA GGCCG CAC CGGCC TGTACGACGTGCGTA Pput_2478 2827878 - 2828318 + | phenylacetic acid degradation protein PaaD TERM 2299 2828826 - 2828790 - g 83 -15.1 -3.14881 | opp_overlap 2828790 CAACCCGCTGATGAA GGCCGCCTACGGCATCG ATT CGATGCCGGAAACGGCT GAAAACGTGGCCGAA Pput_2479 2828311 - 2829531 + | beta-ketoadipyl CoA thiolase TERM 2300 2830781 - 2830765 - g 78 -12.3 -3.76125 | GTATCGCAATGGAAA CCTGGAC AGT GTCCAGG TGCATGTGGAACTGC Pput_2480 2829653 - 2830972 + | phenylacetate-CoA ligase TERM 2301 2830992 - 2831013 + F 100 -14.4 -5.81412 | ATCGGCTGCCATTTC GGCCCCGG CATTGC CCGGGGCC TTTTTTTTGCCTGCG Pput_2481 2831199 - 2832188 + | phenylacetate-CoA oxygenase subunit PaaA TERM 2302 2832194 - 2832179 - f 87 -11.8 -4.10144 | opp_overlap 2832178 GCAACAGAACAAGAA CGCCGC CTGA GCGGCG ATTGATGCGGAGATC Pput_2482 2832214 - 2832495 + | phenylacetate-CoA oxygenase subunit PaaB Pput_2483 2832504 - 2833262 + | phenylacetate-CoA oxygenase, PaaI subunit Pput_2484 2833249 - 2833782 + | phenylacetate-CoA oxygenase, PaaJ subunit Pput_2485 2833798 - 2834874 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit Pput_2486 2835016 - 2835324 + | hypothetical protein Pput_2487 2835321 - 2836883 + | acetate permease Pput_2488 2836923 - 2838155 + | outer membrane porin Pput_2489 2838193 - 2840247 + | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase TERM 2303 2840641 - 2840621 - T 86 -10.3 -4.32034 | TGATGATGAGGAAAA CCGGCCCGG CGT CCCGGCCAG CGACCCTGAGTCTGG TERM 2304 2840685 - 2840714 + T 100 -16.5 -4.66535 | GAGTGTCAGCGTATC CTGCAGGAGCGGG CACG TCCGTTCCTGCAG TTTCTTTTACCGGTT Pput_2490 2841011 - 2840742 - | hypothetical protein TERM 2305 2841142 - 2841095 - R 76 -6.8 -4.63218 | opp_overlap 2841140 TTTTGTCCAACAAAA TGTCATGGCGCGATTCCGGGGC GGTT ACCCCGAAATCGCTGCTGGGCA CCTATGGGGAGCTGT Pput_2491 2841387 - 2841178 - | hypothetical protein Pput_2492 2841623 - 2842021 + | NUDIX hydrolase Pput_2493 2842574 - 2842023 - | peptidase S14, ClpP TERM 2306 2842315 - 2842299 - G 78 -6.5 -4.64861 | CGGGTGGAAAAGAAA CTTGCTG AAA CTGCAAG CCGTGCGTCGCTCTC TERM 2307 2842441 - 2842459 + g 70 -12.4 -3.14878 | opp_overlap 2842429, overlap 2842438 AAGCCATAGCTGCAT TCGCCGCC CAT GGTGGCGA TGTTCAGTTGCAGAA TERM 2308 2843584 - 2843562 - g 89 -17 -3.19371 | opp_overlap 2843575 ATGGAGCGAAGGTAA CCAGGCGGAC GAT GCCCGCCTGG TCGTGCCGGGGCCGC Pput_2494 2842834 - 2843751 + | hypothetical protein TERM 2309 2843897 - 2843915 + G 72 -3.8 -4.57073 | overlap 2843889 CGAGGCCGTACGGGC CACCGG CGCCGAC CTGGTG TTTTTGCAAGAGGTG Pput_2495 2843748 - 2844521 + | endonuclease/exonuclease/phosphatase Pput_2496 2844518 - 2845720 + | cardiolipin synthase 2 TERM 2310 2846654 - 2846628 - g 70 -7.8 -4.09685 | overlap 2846629 2846642 CCTGATCCTGGAAAA GCGCGCCAAAGC CAT GCGCCGGCGCGA CAAGCCTGCTCAGAC Pput_2497 2845720 - 2846673 + | hypothetical protein Pput_2498 2846702 - 2847118 + | hypothetical protein TERM 2311 2847136 - 2847126 - T 74 -6.8 -4.4891 | overlap 2847127 2847128 CCCACTAGTACAAAA GGCT GGG AGCC AGCGCAAGCCCGCTC TERM 2312 2847155 - 2847128 - T 75 -13.4 -2.56836 | overlap 2847126 2847127 CACTAGTACAAAAGG CTGGGAGCCAGC GCAA GCCCGCTCCCAG AACAAGATCAAAGGG Pput_2499 2847433 - 2847209 - | metallothionein family protein Pput_2500 2847894 - 2847430 - | hypothetical protein TERM 2313 2848624 - 2848604 - g 100 -6.8 -5.40072 | TCCGCTGCAAAAAAA GCCACTGC CCCGC GCAGCAGC CGTAAACGCGCCGAC ligD 2848022 - 2850523 + | ATP-dependent DNA ligase TERM 2314 2851302 - 2851263 - g 77 -12.8 -3.55548 | opp_overlap 2851258 2851298 GAACAGTGCCGCAAA CCCCGCCCAGACCCGCAT GCCG ATGCGCATCTGGGCGCTG TGGATGCTGCGTTGC Pput_2502 2850564 - 2851607 + | hypothetical protein Pput_2503 2851604 - 2852359 + | LmbE family protein TERM 2315 2852887 - 2852907 + G 75 -3.9 -4.7373 | overlap 2852888 CCGTTGCATCAGCAG TTCCGCC ATGAGGA GGCGGAC TTTTTGCTGGAGTAC Pput_2504 2852371 - 2852970 + | methyltransferase type 12 TERM 2316 2853113 - 2853130 + G 70 -9.8 -3.57263 | overlap 2853109 CTGCAGTGACGGCAG CGCCGC CGTGGC GCGGCG TTTCGGCGTACACCT Pput_2505 2852967 - 2853626 + | glycosyl transferase family protein Pput_2506 2854469 - 2853648 - | Ku family containing protein Pput_2507 2855142 - 2854555 - | nucleoside phosphorylase-like protein Pput_2508 2856305 - 2855199 - | carboxylate-amine ligase Pput_2509 2857265 - 2856312 - | methyltransferase small Pput_2510 2858596 - 2857265 - | hypothetical protein TERM 2317 2857762 - 2857739 - G 70 -10.4 -3.55622 | gap 1 TTCAAGGGCTGCAAA CAGTTCG-CCT TGC AGGTCGAACTG GCGGATGAGGTCTGG TERM 2318 2858267 - 2858217 - G 82 -14.7 -3.2963 | gap 1, opp_overlap 2858214 ATCAGCCCGTGATAA CGTGGATCGCGCCAGTGATGCAGG GTGC CCTGCAGC-CAGGCGCCATCGACG GCCTTGGTCGGCGCA TERM 2319 2858860 - 2858833 - R 75 -13.4 -2.57211 | opp_overlap 2858832 2858831 2858840, overlap 2858832 ACCTCCTTGGATAAT TGCAGTGCCAGG TCGC CCCGGCACTGCG CCTTGGTCAGTTACG Pput_2511 2859053 - 2858871 - | hypothetical protein TERM 2320 2858950 - 2858960 + g 74 -5.4 -4.60889 | overlap 2858921 CCGCCCTTGCGACCG GCTT CGG AAGC TTTTTCACGGTCATT TERM 2321 2859185 - 2859175 - R 79 -8.2 -4.41348 | opp_overlap 2859175 2859173 GTGGCGTTAAATAAA CGGC ATC GCCG TATTTGGTGCGCGTG Pput_2512 2860484 - 2859201 - | major facilitator transporter TERM 2322 2860252 - 2860213 - G 77 -2.1 -5.00616 | gap 1, overlap 2860219 2860234 TTGCTGGCGAAAAAA CCATAAGTCCAAGGCAGG ATATG CCTGCGCTGCACCC-TGG ATGCCAGCCAGCCAA TERM 2323 2860428 - 2860410 - G 86 -13.8 -3.84271 | GTAGAACAGCAACAA GCCGGCGA TGA CCGCCGGC CCCTCACCAGGCTGG Pput_2513 2861400 - 2860489 - | aldo/keto reductase TERM 2324 2860654 - 2860639 - G 74 -9 -3.92522 | overlap 2860641 GGCGAACTTGAGAAA CAGCTG TGCC CAGCTG CCGATGCCTGCTTCG Pput_2514 2862353 - 2861490 - | Dyp-type peroxidase family protein Pput_2515 2862538 - 2863431 + | bile acid:sodium symporter Pput_2516 2863933 - 2863466 - | carotene hydroxylase Pput_2517 2864332 - 2865045 + | MgtC/SapB transporter Pput_2518 2865063 - 2865566 + | GCN5-related N-acetyltransferase Pput_2519 2867178 - 2865610 - | diguanylate cyclase Pput_2520 2867332 - 2867832 + | outer membrane protein-like protein Pput_2521 2867841 - 2868092 + | hypothetical protein Pput_2522 2869201 - 2868215 - | hypothetical protein TERM 2325 2869564 - 2869552 - g 81 -4.1 -5.08824 | CCCTTAGCGAAAAAA TCATC TAT GACGA GGAGGCAGACTTCGG TERM 2326 2870359 - 2870336 - g 70 -7.4 -4.07568 | gap 1 TGCGGGTGCTGAAAA GCAGGCGCTCA CGT TG-GAGCCTGC AACCCCCAATAGCCA TERM 2327 2870604 - 2870615 + G 77 -2.2 -5.02074 | gap 1, overlap 2870604 TTGACACCCTTGTTC G-GGG AGA CCCAC TTTTTTAAAGCATCC Pput_2523 2869437 - 2870909 + | hypothetical protein Pput_2524 2871069 - 2871674 + | YheO domain-containing protein TERM 2328 2871895 - 2871869 - g 73 -6.4 -4.30995 | opp_overlap 2871876, overlap 2871866 2871871 GCGTCCATAAAAGAA GCCCACAGCGCG CTT CGCCCTGTCGTC AGCATCACACCGCTG Pput_2525 2871794 - 2872795 + | hypothetical protein Pput_2526 2872792 - 2873739 + | ornithine cyclodeaminase TERM 2329 2873781 - 2873751 - T 70 -11.8 -2.53822 | opp_overlap 2873777, overlap 2873748 CTGAGGCGACAACAG CGTCAGCGCAAACG TTG CACCTGCGCTGGCG TGCGCTGCATCAGCA Pput_2527 2874994 - 2873753 - | N-isopropylammelide isopropylaminohydrolase Pput_2528 2876216 - 2874999 - | PucR family transcriptional regulator TERM 2330 2875090 - 2875067 - G 83 -8 -4.62783 | opp_overlap 2875064 2875067 2875080 CATTCATGCGAAAAA GCGGGTCGTC CAGC GACTGCCCGC TCAGTTGTTCGATGC TERM 2331 2876137 - 2876167 + g 78 -11.9 -3.72576 | gap 1, opp_overlap 2876119 CAGCGTACCCGCCGC TGCAGGTTGCGCGC GCCG GCCCGCA-CCTGCA TTTCGTGCAGACCGG codB 2877478 - 2876213 - | cytosine permease TERM 2332 2876956 - 2876936 - G 77 -12.5 -3.54543 | AGCCAGGCCGGCAAA GCCACCGGC ATC GCGGGTGGC GATGTACATGGACAC TERM 2333 2877667 - 2877705 + r 74 -10.2 -3.55563 | opp_overlap 2877666 2877667, overlap 2877669 GCTCATGCACCAAAG CGGGCCTGGGCTGGGT AGTAATC ACCCAGCCCACGGCGG TTTACACGGTCCCGT Pput_2530 2878372 - 2877707 - | TenA family transcription regulator TERM 2334 2877927 - 2877945 + g 70 -10.2 -3.57144 | opp_overlap 2877924 AAGTCGCCAATACGC TCGGCCAG GGT CCGGCCGA TTTCGGCATAGCCGA TERM 2335 2878135 - 2878181 + g 91 -17.8 -3.21934 | overlap 2878136 2878137 CGGTTTCATCCAGGA TCGCCGCCAGCCCGGCCTGCGC CGC GCGAATGTCGGCCGGGCGGCGG CTTTTGTAGGCAGCC TERM 2336 2878136 - 2878180 + g 87 -19.1 -2.52946 | overlap 2878135 2878137 GGTTTCATCCAGGAT CGCCGCCAGCCCGGCCTGCGC CGC GCGAATGTCGGCCGGGCGGCG GCTTTTGTAGGCAGC TERM 2337 2878137 - 2878182 + g 100 -15.4 -4.36914 | gap 1, overlap 2878136 2878135 GTTTCATCCAGGATC GCCGCCAGCCCGGCCTGCG CCGCGCGAA TGTCGGCCGGGC-GGCGGC TTTTGTAGGCAGCCA Pput_2531 2879112 - 2878369 - | TenA family transcription regulator TERM 2338 2878964 - 2878946 - G 78 -11.6 -3.73072 | AATCGGGTCACGAAA CGGTGGCC AAC GGCCGCCG ACCAGGTCGGCTCGC TERM 2339 2880127 - 2880111 - g 73 -6.5 -4.30576 | overlap 2880112 CGGCCACCAGGAAAA GGCTGGT CGC ACCAGCG CTGGACCGAGTTCTA TERM 2340 2881307 - 2881289 - g 70 -10.3 -3.67498 | overlap 2881292 CAACCTGCAAGACAA CAACGGC GTCTT GCCGTTG CAGGCCATTGCCGAG TERM 2341 2881822 - 2881834 + G 76 -9.1 -4.07568 | opp_overlap 2881821 2881822 AATTGGCCAACCAAT CCACC GAC GGTGG TTTTAGCGGCGACGG Pput_2532 2879451 - 2882846 + | multicopper oxidase, type 2 TERM 2342 2882875 - 2882854 - f 84 -13.7 -3.62418 | gap 1, overlap 2882855 ACAAGTGAGTGCAAA GCGGGGCCGC CAT GCGGCCCC-C ATCAGCCAACCCACG TERM 2343 2882875 - 2882855 - f 76 -13.9 -2.76969 | overlap 2882854 CAAGTGAGTGCAAAG CGGGGCCGC CAT GCGGCCCCC ATCAGCCAACCCACG Pput_2533 2882902 - 2883885 + | electron transport protein SCO1/SenC Pput_2534 2883967 - 2886294 + | diguanylate cyclase/phosphodiesterase TERM 2344 2887253 - 2887280 + G 72 -7.7 -4.13014 | opp_overlap 2887242 2887240 AAGACGCCAAGTCGG CGCTGCGCT ACATCGACTC GGCGCAGCG TTTTGGCGATCTGGC Pput_2535 2886355 - 2887335 + | phage integrase family protein Pput_2536 2888365 - 2887325 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 2345 2889249 - 2889266 + G 78 -10.5 -4.09685 | overlap 2889261 TTCGTCCGCTCGACC CCGCGCG AACG CGTGCGG TTTTGCCCAATCCGC Pput_2537 2888493 - 2889392 + | LysR family transcriptional regulator Pput_2538 2890551 - 2889412 - | glycerate kinase Pput_2539 2891790 - 2890693 - | transcriptional regulator, CdaR Pput_2540 2891954 - 2893282 + | major facilitator transporter Pput_2541 2893458 - 2894978 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2346 2895742 - 2895698 - g 87 -18.6 -2.72344 | gap 2 GCTCAGTGGCAAGTA TGC-GCCGGGCGCGG-TGCCGG ACG CCGGCAGCCGCGCAGGGCGGCA GGACAAACGCATCAT Pput_2542 2895051 - 2896061 + | aldo/keto reductase Pput_2543 2896157 - 2897254 + | N-ethylmaleimide reductase TERM 2347 2897284 - 2897263 - T 95 -12.9 -4.65895 | opp_overlap 2897263 GGCTTGATGCAAAAA CGGGCGCTC TTGC GGGCGCCCG TTTTTTTTTCGTGTC TERM 2348 2897263 - 2897284 + T 100 -15.1 -6.19443 | opp_overlap 2897263 GGCTTGATGCAAAAA CGGGCGCTC TTGC GGGCGCCCG TTTTTTTTTCGTGTC Pput_2544 2898278 - 2897298 - | luciferase family protein Pput_2545 2899290 - 2898379 - | LysR family transcriptional regulator Pput_2546 2900438 - 2899359 - | membrane-bound metal-dependent hydrolase TERM 2349 2899648 - 2899686 + g 73 -3.1 -4.7078 | gap 1, opp_overlap 2899662, overlap 2899647 2899650 2899651 TCATAACGCAGCCAG TCATCGGT-GAACCAGCG CAAG CGCTGGTGCAACGGGTCA TTTTTCAGTGCTTGC TERM 2350 2900199 - 2900171 - G 83 -6.7 -4.88388 | gap 1, opp_overlap 2900188 AGAACGCCACAAAAA GCCTGGGCAAGG TATACC CCTTGC-CGGGC CAGCGCTTGTTGACC Pput_2547 2901763 - 2900513 - | outer membrane porin TERM 2351 2901452 - 2901470 + g 70 -11.7 -3.17763 | ACGGCCGTCGCCATG CACCGGC AACAG GCCGGTG TTGGTGCGGTCTGGA Pput_2548 2903017 - 2901818 - | benzoate transporter Pput_2549 2904077 - 2903163 - | catechol 1,2-dioxygenase Pput_2550 2905435 - 2904107 - | major facilitator transporter TERM 2352 2904957 - 2904940 - G 71 -5.5 -4.30576 | overlap 2904925 GCGGCAGCATGAAAA TGCCGAC ACCT GCCGACA GCATGCCGCCCAGTG benD 2906254 - 2905493 - | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase TERM 2353 2905694 - 2905708 + g 71 -12.8 -3.05384 | ACTGTTGCGCGGTAC GCGCCG GGG CGGCGC TTCGGTGCCACCCGG Pput_2552 2907458 - 2906448 - | oxidoreductase FAD/NAD(P)-binding subunit Pput_2553 2908016 - 2907531 - | benzoate 1,2-dioxygenase Pput_2554 2909371 - 2908013 - | Rieske (2Fe-2S) domain-containing protein TERM 2354 2908926 - 2908907 - G 78 -2.8 -5.06414 | gap 1 GCTGCCGAACAAAAA GCCCCG-GT ACG ACTCGAAGC GTGCCACCTTGGTCA TERM 2355 2909288 - 2909318 + g 76 -8.2 -4.12188 | opp_overlap 2909293 CAACCGTGGGTCGGT GAACATCTCCCGCT TGC AGCGGTAGATGCCC TTTTCACGGTCGTCC Pput_2555 2910487 - 2909531 - | AraC family transcriptional regulator Pput_2556 2911518 - 2910787 - | hypothetical protein Pput_2557 2912496 - 2911705 - | histidinol-phosphate phosphatase, putative TERM 2356 2912826 - 2912810 - g 77 -13.7 -3.35679 | GCTGCTCAGCGACAA CCGCCAG TGG CTGGCGG ATGAGGCCGAACAGC Pput_2558 2912622 - 2913512 + | UspA domain-containing protein TERM 2357 2913610 - 2913628 + F 70 -10.3 -3.36175 | CTGTCGGCCCCTTCG CAGTGCC CTGCA GGCACTG TTGTCACTGACGCTT TERM 2358 2914690 - 2914656 - g 83 -12.8 -3.91357 | GCACAATGACAACAA CATGGCGCAGGTGCGC TTC GAGCACCTGCTCAATG ACAACTGGTCGCTGG TERM 2359 2915847 - 2915878 + G 71 -8.7 -3.86684 | gap 2, opp_overlap 2915811 2915837 CAACAGCTACGTATA CCCCGG-C-GCACCG CGCA CGGTGCAGGCCGGCG TTTCGTATACCTTCT Pput_2559 2913769 - 2915895 + | TonB-dependent siderophore receptor TERM 2360 2915887 - 2915935 + T 82 -15.9 -2.85351 | opp_overlap 2915837 2915933, overlap 2915901 GCCGGCGTTTCGTAT ACCTTCTGAATTGCCGGGGCCGC GCC GCGGCCCCGTCATGTCAGAACGC TGTGCTGTAGAACAG TERM 2361 2915901 - 2915921 + T 95 -19.7 -2.62263 | overlap 2915887 TACCTTCTGAATTGC CGGGGCCGC GCC GCGGCCCCG TCATGTCAGAACGCT Pput_2560 2916448 - 2915927 - | hypothetical protein TERM 2362 2916661 - 2916694 + r 83 -9.5 -4.25104 | overlap 2916663 CGAGGCGTGACCTGA CCCAGGCAGGAGTAC AGGT GTACTCCTGCCCGTC TTTTCATCAACGCCA TERM 2363 2916663 - 2916692 + r 100 -16.5 -3.73042 | overlap 2916661 AGGCGTGACCTGACC CAGGCAGGAGTAC AGGT GTACTCCTGCCCG TCTTTTCATCAACGC Pput_2561 2917144 - 2916701 - | hypothetical protein Pput_2562 2918137 - 2917271 - | LysR family transcriptional regulator TERM 2364 2918678 - 2918692 + G 74 -12.8 -3.30124 | GGCAGGTGCTGCGCG GCGCCG TGC CGGCGC TTCTGGCGGGTAACA Pput_2563 2918245 - 2919630 + | aldehyde dehydrogenase Pput_2564 2921578 - 2919668 - | hypothetical protein Pput_2565 2922664 - 2921765 - | helix-turn-helix domain-containing protein TERM 2365 2922462 - 2922443 - G 95 -10 -4.4078 | gap 1, overlap 2922445 GCGGTCGAAGCAAAA CGCC-AGCG AGC CGCTTGGCG CGCGGAAAAACTGCT TERM 2366 2923880 - 2923840 - g 72 -3.8 -4.63218 | gap 1, overlap 2923841 GTGGGGCGAAGAAAA CCGCACGGCCGG-CCTGCG TGTG CCCACGTCCAGCCCTGAGG CGATGCGGGTGGAAA Pput_2566 2922848 - 2924206 + | glutamate--putrescine ligase TERM 2367 2924890 - 2924873 - g 74 -4.7 -4.65895 | CCGCGCAGCGAAAAA CCGGGCG ACTA CGCCAAG GCCGAGGCACGCCTG Pput_2567 2924288 - 2925376 + | extracellular solute-binding protein TERM 2368 2926564 - 2926533 - g 81 -13.8 -3.57462 | gap 1, opp_overlap 2926562 CACTGGACGGCGAAA CTGCTGGCCGAAAGC ATC GCCCTCGGCCA-CAG CCACGGCCTGGATGT Pput_2568 2925390 - 2926685 + | FAD dependent oxidoreductase Pput_2569 2926826 - 2927503 + | hypothetical protein Pput_2570 2928949 - 2927573 - | L-serine dehydratase 1 TERM 2369 2929509 - 2929474 - g 80 -14.6 -3.12668 | opp_overlap 2929486, overlap 2929477 TACCCGGATATCGAA CTACGCCTGGTCGCCG AAGA CAGCGCCCAGGCGCTG ACCCCGGGTGACTTC TERM 2370 2929506 - 2929477 - g 84 -17.1 -2.77182 | opp_overlap 2929486, overlap 2929474 CCGGATATCGAACTA CGCCTGGTCGCCG AAGA CAGCGCCCAGGCG CTGACCCCGGGTGAC Pput_2571 2929096 - 2930037 + | LysR family transcriptional regulator Pput_2572 2931492 - 2930071 - | undecaprenyl-phosphate galactose phosphotransferase TERM 2371 2931074 - 2931085 + g 72 -7.2 -4.19238 | TCCAGGCGCGCATGC GCGC TAAA GCGC TTTTGCAGTTCGCGC Pput_2573 2932422 - 2931670 - | WecB/TagA/CpsF family glycosyl transferase Pput_2574 2933609 - 2932422 - | glycosyl transferase family protein TERM 2372 2933645 - 2933627 - R 70 -10.2 -3.35046 | overlap 2933625 GTATGCCTTGAAATA GCCGGCCA GCC TGGCCGCC TCGGTGTCGATGTCA Pput_2575 2934841 - 2933606 - | glycosyl transferase, group 1 Pput_2576 2935862 - 2934858 - | hypothetical protein Pput_2577 2936849 - 2935872 - | glycosyl transferase family protein TERM 2373 2936806 - 2936786 - G 71 -8.2 -3.96216 | opp_overlap 2936786 2936786 GCGCCAGCGAAACAA GGCAGCGC TCGAG GCGCTGGC CTTCATTGCGGCCGA Pput_2578 2937379 - 2936855 - | Serine acetyltransferase-like protein Pput_2579 2938344 - 2937388 - | glycosyl transferase family protein Pput_2580 2939032 - 2938346 - | hexapaptide repeat-containing transferase Pput_2581 2940524 - 2939058 - | GMC oxidoreductase TERM 2374 2939261 - 2939290 + g 70 -7.2 -4.08216 | gap 1 AGGCGGCCATACGCG TGGTGCC-CATGT GATGG GCATGAGGCGCCA TTTTCAGCGGAATCG Pput_2582 2940736 - 2940521 - | hypothetical protein Pput_2583 2942137 - 2940761 - | polysaccharide biosynthesis protein TERM 2375 2943455 - 2943495 + G 86 -13.9 -3.94634 | opp_overlap 2943450 2943451 CCTACATCAACCTGG CGCTGCGGGCCGGCCTGGT CGG GCTAGGCCTGTTCGTGGCG TTCTTTGCCGTGCTG Pput_2584 2942233 - 2943759 + | hypothetical protein Pput_2585 2943765 - 2946365 + | hypothetical protein Pput_2586 2946471 - 2947436 + | UDP-glucose 4-epimerase Pput_2587 2948306 - 2947500 - | non-specific protein-tyrosine kinase Pput_2588 2949880 - 2948318 - | lipopolysaccharide biosynthesis protein Pput_2589 2951015 - 2949900 - | hypothetical protein Pput_2590 2951597 - 2951040 - | polysaccharide export protein TERM 2376 2952255 - 2952282 + r 83 -11.2 -3.98282 | opp_overlap 2952254 2952256, overlap 2952256 TTCACAGCTGAGAAC ACGTGGGGGGCA TGAT TGCCCCCTGCGG TTTCATTCGTCTGCG TERM 2377 2952256 - 2952281 + r 80 -14.7 -2.98487 | opp_overlap 2952254 2952256, overlap 2952255 TCACAGCTGAGAACA CGTGGGGGGCA TGAT TGCCCCCTGCG GTTTCATTCGTCTGC TERM 2378 2952281 - 2952256 - R 70 -10.3 -3.24365 | opp_overlap 2952256 2952255, overlap 2952254 TCACAGCTGAGAACA CGTGGGGGGCA TGAT TGCCCCCTGCG GTTTCATTCGTCTGC Pput_2591 2952827 - 2952285 - | XRE family transcriptional regulator TERM 2379 2952391 - 2952373 - G 70 -10.2 -3.64703 | overlap 2952374 GTCTGGGCATTGAAA TGCAGGGC GTC GCCCTGCT CCAGCAACACCCGCT TERM 2380 2952390 - 2952374 - G 72 -13.7 -2.78679 | overlap 2952373 TCTGGGCATTGAAAT GCAGGGC GTC GCCCTGC TCCAGCAACACCCGC Pput_2592 2954433 - 2952904 - | short chain fatty acid transporter TERM 2381 2954396 - 2954383 - G 81 -2.3 -5.16572 | AGGCAACGCAAAAAA CCTGT GGGA ACGGG TTGACCCGCGAATGC Pput_2593 2955132 - 2954476 - | 3-oxoacid CoA-transferase, B subunit Pput_2594 2955866 - 2955168 - | 3-oxoacid CoA-transferase, A subunit TERM 2382 2956701 - 2956668 - g 74 -11.7 -3.53224 | gap 1, overlap 2956672 CAGTCGCGTTCGAAA GCCACCA-GCTGACGA CCA TCGGCCGCATGGTGGC CAGCGGCCTGGGGGT Pput_2595 2956007 - 2956912 + | LysR family transcriptional regulator Pput_2596 2956900 - 2957721 + | aldo/keto reductase Pput_2597 2958949 - 2957999 - | transposase, IS111A/IS1328/IS1533 TERM 2383 2959235 - 2959192 - R 95 -16.8 -3.55071 | gap 1, opp_overlap 2959176 CGATAGGGCCGCAAA GCGGCCCCAGCAATCTATGCA TGA TGCCGAGATC-CTGGGGCCGC TGCGCGGCCCTATCG dnaE2 2962564 - 2959484 - | error-prone DNA polymerase Pput_2599 2963979 - 2962561 - | hypothetical protein TERM 2384 2962777 - 2962759 - G 72 -12.4 -3.28924 | opp_overlap 2962775 2962776 GATCGGTGCCGACAA CAGCCACC CCG GGCGGCTG CCCGGTGCAACCGGC TERM 2385 2963457 - 2963425 - G 77 -12.7 -3.54424 | gap 1 GCCCATGCGGGCAAA CGCTTCGGCC-GCC TCTGCC GGCAGGCCGACGCG CGTGATGGGCATGCC Pput_2600 2964606 - 2963986 - | hypothetical protein Pput_2601 2965223 - 2964606 - | LexA repressor Pput_2602 2965315 - 2965998 + | HAD family hydrolase Pput_2603 2967380 - 2965995 - | major facilitator transporter Pput_2604 2967751 - 2967425 - | NIPSNAP family protein Pput_2605 2969466 - 2967751 - | putative succinate dehydrogenase Pput_2606 2970290 - 2969463 - | short-chain dehydrogenase/reductase SDR Pput_2607 2970467 - 2971339 + | helix-turn-helix domain-containing protein TERM 2386 2971360 - 2971340 - T 75 -12.5 -3.15544 | opp_overlap 2971323 CGGGAGGGCCAGTAA CGCCCGCAG GTT CTGTGGGCG GTACTGGCAATGCAC Pput_2608 2972190 - 2971417 - | regulatory protein, IclR Pput_2609 2973712 - 2972255 - | amidase TERM 2387 2972816 - 2972771 - G 74 -12.6 -3.31792 | CCAGCATTGCCACAA GCGC-GCCAGGTCGAATGCCGG CTGG CAGGC-CTCGACCTGGCAGCCC AGCTCGGCAAAGTCG TERM 2388 2972843 - 2972828 - G 70 -10.4 -3.54424 | opp_overlap 2972832 GCCCAGCTCGGCAAA GTCGGC CAGC GCCGAC TCGCACAGGCTCATT Pput_2610 2975019 - 2973709 - | major facilitator transporter Pput_2611 2976278 - 2975103 - | amidohydrolase Pput_2612 2977818 - 2976325 - | YD repeat-containing protein Pput_2613 2980920 - 2978320 - | YD repeat-containing protein Pput_2614 2981529 - 2980933 - | hypothetical protein Pput_2615 2985736 - 2981534 - | YD repeat-containing protein TERM 2389 2985416 - 2985444 + g 81 -3.7 -5.00616 | overlap 2985409 2985417 2985419 GGCAATCTGCACCGG CCCTGGGTGCTTG TCG CAGGCACCGATGC TTTTTTCGACGCGGG Pput_2616 2986210 - 2985743 - | hypothetical protein Pput_2617 2986829 - 2986245 - | hypothetical protein Pput_2618 2988696 - 2986840 - | Rhs element Vgr protein TERM 2390 2988969 - 2988952 - H 77 -8.3 -4.25283 | ACCGGCCTAGGAAAA CCGGGCG ATAC CGCCCTG TAAGGCAATGTCATA Pput_2620 2989609 - 2990160 + | hypothetical protein TERM 2391 2990184 - 2990172 - f 79 -10.5 -3.91911 | opp_overlap 2990170 2990172 CTGAGTTGAATGAAA CCGGC TGC GCCGG TGTTTGCGGGCAAGC TERM 2392 2990172 - 2990184 + F 70 -10.5 -3.34398 | opp_overlap 2990172, overlap 2990170 CTGAGTTGAATGAAA CCGGC TGC GCCGG TGTTTGCGGGCAAGC Pput_2621 2990739 - 2991503 + | hypothetical protein Pput_2622 2991568 - 2992107 + | hypothetical protein Pput_2623 2992122 - 2993624 + | hypothetical protein Pput_2624 2993651 - 2994133 + | GPW/gp25 family protein Pput_2625 2994133 - 2995953 + | hypothetical protein Pput_2626 2995917 - 2996987 + | hypothetical protein Pput_2627 2996984 - 2999581 + | ATPase TERM 2393 2999758 - 2999746 - g 72 -7.7 -4.2349 | GGCCGACAGCGAAAA GGTCA TCC TGACC TCCGACGGCGGCAAC TERM 2394 2999980 - 3000004 + G 70 -10 -3.62597 | gap 1, opp_overlap 2999980 GCCGCTGGCCAAGAA CGCGCGCTACG TCGG CGTGGCG-GCG TTCTTCCGCGATGAG Pput_2628 2999606 - 3000328 + | hypothetical protein Pput_2629 3000325 - 3001668 + | hypothetical protein Pput_2630 3001665 - 3002381 + | hypothetical protein Pput_2631 3002412 - 3006215 + | ImcF domain-containing protein Pput_2632 3006212 - 3007120 + | hypothetical protein TERM 2395 3007687 - 3007704 + G 74 -4.8 -4.60487 | gap 1, opp_overlap 3007674 3007687 AACAGCCCCGAGGAA GCCG-GC AAGTG GCGCGGC TTTTTGCAAATGCTG TERM 2396 3009086 - 3009047 - g 79 -9.1 -4.13014 | overlap 3009050 GCCATACCGGCAAAA GCATGGCCGCCGCCGGC AGCGAG GCCGGTGGCAACCAGGA CTACCTGTATGCCAG TERM 2397 3009083 - 3009050 - g 75 -13.8 -3.09272 | overlap 3009047 ATACCGGCAAAAGCA TGGCCGCCGCCGGC AGCGAG GCCGGTGGCAACCA GGACTACCTGTATGC Pput_2633 3007117 - 3009612 + | OmpA/MotB domain-containing protein TERM 2398 3009667 - 3009628 - f 100 -16.4 -3.80733 | gap 1, overlap 3009629 GCCACGCCACAATAA CCGGTCGCCGGGGCCTCAC AGG ATGAGGCCCGGGCGG-CGG CAAGCTACCTCTGCC TERM 2399 3009667 - 3009629 - f 86 -16.6 -2.88118 | overlap 3009628 CCACGCCACAATAAC CGGTCGCCGGGGCCTCAC AGG ATGAGGCCCGGGCGGCGG CAAGCTACCTCTGCC Pput_2634 3009756 - 3010274 + | hypothetical protein TERM 2400 3010288 - 3010311 + F 77 -12.4 -3.28712 | opp_overlap 3010287 3010290, overlap 3010298 3010299 AAGCACGTACCGAAC CATGGGCCGC TTCG GCGGCCTGTG TTCTGCAGCGCGCCG TERM 2401 3010317 - 3010343 + F 100 -21.6 -3.06501 | overlap 3010299 3010298 3010319 GCGGCCTGTGTTCTG CAGCGCGCCGGG TTT TCCGGCGCGCTG TTCACTAGCCATGTC TERM 2402 3010319 - 3010341 + F 90 -18.4 -3.08996 | overlap 3010299 3010298 3010317 GGCCTGTGTTCTGCA GCGCGCCGGG TTT TCCGGCGCGC TGTTCACTAGCCATG TERM 2403 3010888 - 3010861 - g 76 -7 -4.42653 | overlap 3010863 ACGCCATGTAGAAAA CCTCGCCTTG CAAAACCC CAAGGCGATG CAGACAGCGCTGAAC Pput_2635 3010370 - 3011455 + | ImpA domain-containing protein TERM 2404 3012211 - 3012186 - g 76 -8.2 -4.19238 | GTGGCAAGGGCAAAA CCTGCGCGAC ATCCTG GTCACGCTGG GCTATGACGTCGATA Pput_2636 3011623 - 3014139 + | excinuclease ABC, A subunit Pput_2637 3014224 - 3015873 + | major facilitator transporter Pput_2638 3015870 - 3017003 + | secretion protein HlyD family protein TERM 2405 3017307 - 3017295 - g 71 -9.1 -3.7282 | overlap 3017292 GCACGGCACCAACAA GGCGT TGC ACGCC CTGGCGCAGGTAGGC Pput_2639 3017107 - 3017709 + | hypothetical protein Pput_2640 3018621 - 3017746 - | auxin efflux carrier TERM 2406 3018277 - 3018250 - G 72 -2.6 -4.72986 | gap 1, overlap 3018251 3018252 CAGGGTCAGGAAAAA TG-CCACGGCCAG GGC CAGGCCATGCTCA CCGAAGGCATACAGA Pput_2641 3019049 - 3020347 + | major facilitator transporter TERM 2407 3020675 - 3020629 - g 73 -12.8 -3.16191 | opp_overlap 3020630, overlap 3020610 3020605 3020608 3020667 3020670 TGACACCGGCAGCAA CGCCGATGCCGCCGACGGTGCC TCT GGCGGCTCCAACAGCACCGGCG AAGCCACCGGCTCTG Pput_2642 3020429 - 3020737 + | hypothetical protein Pput_2643 3020787 - 3021338 + | PEBP family protein TERM 2408 3021495 - 3021528 + F 70 -10.2 -3.35011 | overlap 3021494 CAGCCTGCGCCCTGT GCTGGCCGTTGCCG GCTGCG TGGCACCTGCCAGC TATTACTTTGGGTAT TERM 2409 3021643 - 3021618 - f 100 -21.9 -3.79473 | opp_overlap 3021618 ATGAGAATACTCAAA CCCCCGGTCGG CTTC CCGACCGGGGG TTTTGCTTTTCAGGC TERM 2410 3021618 - 3021643 + F 100 -21.9 -4.67038 | opp_overlap 3021618 ATGAGAATACTCAAA CCCCCGGTCGG CTTC CCGACCGGGGG TTTTGCTTTTCAGGC Pput_2644 3021893 - 3022954 + | phospho-2-dehydro-3-deoxyheptonate aldolase Pput_2645 3023035 - 3023316 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2411 3023422 - 3023444 + F 77 -9.8 -3.99481 | opp_overlap 3023421 TTCGCGGGTAAAACC GCTCCCACAA GTA TGGTGGGGGC TTGTATTTTCGTGCA Pput_2646 3023459 - 3025258 + | extracellular solute-binding protein Pput_2647 3025255 - 3026313 + | binding-protein-dependent transport systems inner membrane component TERM 2412 3027256 - 3027284 + G 71 -8.1 -3.86897 | TTACCGCGTTCTTTG CGCTGGCGGTGAT CCT GTCACTGCTGGTG TTTATCGGGGATGCC Pput_2648 3026313 - 3027329 + | binding-protein-dependent transport systems inner membrane component Pput_2649 3027389 - 3028771 + | sigma-54 dependent trancsriptional regulator TERM 2413 3028764 - 3028779 + F 86 -5.4 -5.20331 | overlap 3028775 AGATGGCGGCACTTG GTCTCT AATT GGAGAC TTTTGTTTCTTGTTT TERM 2414 3028862 - 3028836 - f 70 -12.2 -2.57335 | opp_overlap 3028835, overlap 3028828 3028832 ATAACAGGCAAGCCA GCGATGGGCTGC AAC GCAGCCCCTGGC GTCTCTGAATGTAGA Pput_2650 3028996 - 3030387 + | citrate transporter TERM 2415 3030451 - 3030467 + G 75 -13.7 -3.01924 | CACCAGCGGCATTGG CCTGGGC ATC GCCCAGG TATTGGCCCGGGCTG TERM 2416 3031054 - 3031043 - g 74 -2.2 -4.82901 | CTGCTGGCAGAAAAA CAAC CATC GCTG GCCTTCGTCACCCCC Pput_2651 3030398 - 3031168 + | 3-hydroxybutyrate dehydrogenase TERM 2417 3031370 - 3031332 - g 95 -10.9 -4.59773 | CCCGAGGCGGAAAAA GGCTTCACCCGGCAGGT TATCC ACCTGCCGGCCCAGGCC GACGAGTCGGCCTAT Pput_2652 3031224 - 3031703 + | ecotin precursor TERM 2418 3032518 - 3032535 + G 76 -5.5 -4.56597 | TTCCAGGCAGCCAAC GTCAGCC TCTG GGATGAC TTTTTCCAGCCCGGC Pput_2653 3031795 - 3033747 + | acetoacetyl-CoA synthetase TERM 2419 3033899 - 3033917 + G 70 -10.2 -3.58343 | opp_overlap 3033869 AAAAGCTCAGGCAGC GCATCGCC AAC GGCGAGGC TTTCGACGTGCTCGC Pput_2654 3033835 - 3034110 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2420 3034220 - 3034175 - f 72 -10.3 -3.48593 | opp_overlap 3034185, overlap 3034176 CACTCCTCTATACAA CCCCGGTAACCCTGTGCACCA CGCG TGGTGCGCAGGTTTCCCTGGT GAATGGAGGTTTTCC TERM 2421 3034219 - 3034176 - f 75 -13.8 -2.68942 | opp_overlap 3034185, overlap 3034175 ACTCCTCTATACAAC CCCGGTAACCCTGTGCACCA CGCG TGGTGCGCAGGTTTCCCTGG TGAATGGAGGTTTTC TERM 2422 3034185 - 3034210 + F 91 -15.5 -3.68827 | opp_overlap 3034176 3034175 TACAACCCCGGTAAC CCTGTGCACCA CGCG TGGTGCGCAGG TTTCCCTGGTGAATG Pput_2655 3034238 - 3036697 + | outer membrane autotransporter Pput_2656 3037317 - 3036694 - | lysine exporter protein LysE/YggA TERM 2423 3037218 - 3037179 - G 78 -15.7 -2.80511 | gap 1, opp_overlap 3037208, overlap 3037176 3037171 3037181 CGCAGAAGGCAAGGA TACGGCCGGCGC-CGGCC ACACA GGCGGTGCGCAGGCCGTA ACGGCTGGCGTTGTG TERM 2424 3037216 - 3037181 - G 74 -13.9 -2.94705 | gap 1, opp_overlap 3037208, overlap 3037179 3037176 3037171 CAGAAGGCAAGGATA CGGCCGGCGC-CGGCC ACACA GGCGGTGCGCAGGCCG TAACGGCTGGCGTTG TERM 2425 3037532 - 3037504 - g 70 -10.1 -3.59262 | TGGCACATGTCGAAA GCCGGCGCGCCTG CCA CAGCCGGGCCTGC TACAAGGCCCACAGC TERM 2426 3038177 - 3038197 + G 70 -9.8 -3.54307 | AGTGGCCTACCAGCT TGGCTTTG CTGAC CAAAGCCA TTTCCAGCGGGTGTT Pput_2657 3037449 - 3038258 + | AraC family transcriptional regulator TERM 2427 3038303 - 3038318 + TF 71 -4.6 -4.56597 | opp_overlap 3038289 3038313, overlap 3038305 ACGCCAGAACGGGCC CGGCAG CAGA CTGCGG TTTTTCCGCAGAGCC TERM 2428 3038458 - 3038433 - gT 71 -11.1 -3.1886 | gap 1, overlap 3038435 ACGCAACGCGATCAA CAGCGGCTGGCG CAT CGCCAGCGGC-G CCTGCCTGGGCATAG TERM 2429 3038457 - 3038435 - gT 83 -14.8 -3.15574 | overlap 3038433 GCAACGCGATCAACA GCGGCTGGCG CAT CGCCAGCGGC GCCTGCCTGGGCATA Pput_2659 3039628 - 3038903 - | metallophosphoesterase Pput_2658 3038341 - 3038955 + | lysine exporter protein LysE/YggA TERM 2430 3039239 - 3039206 - Gf 77 -11.7 -3.55444 | gap 1 TGCCCAGTCGGCAAA CGGGCT-GTCGGCATG CAG CAGGCCTACCAGCCCG TCCGCACTCTCCACT Pput_2660 3039843 - 3040586 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_2661 3040583 - 3040825 + | hypothetical protein Pput_2662 3041330 - 3040830 - | methylated-DNA--protein-cysteine methyltransferase TERM 2431 3041141 - 3041109 - G 70 -10.5 -3.58343 | CTCAGTACCGGCAAA GTCCAGCGCCAGC TCGAAAC GCTGGCGCTTGCC GTCAAAGTACTCGCC Pput_2663 3042210 - 3041401 - | hypothetical protein TERM 2432 3042389 - 3042371 - R 75 -11.6 -3.44284 | overlap 3042369 3042372 CCGCCAGCAACAAGA TGGGGCGC AAG GCGCCCCC AAGCATCGCAAGCCA TERM 2433 3042388 - 3042372 - R 80 -15.1 -2.66249 | overlap 3042369 3042371 CGCCAGCAACAAGAT GGGGCGC AAG GCGCCCC CAAGCATCGCAAGCC Pput_2664 3044048 - 3042408 - | acyl-CoA synthetase Pput_2665 3045838 - 3044060 - | acyl-CoA dehydrogenase domain-containing protein Pput_2666 3048296 - 3045831 - | RND efflux transporter TERM 2434 3048043 - 3048060 + g 70 -9.8 -3.56568 | ACCGCATTGCCCAAT CCGCGC AGCGAA GCGCGG TTTCCCAGGTAGTTC Pput_2667 3049307 - 3048312 - | hypothetical protein TERM 2435 3048924 - 3048956 + g 100 -13.3 -4.60041 | overlap 3048916 GGTGTCCGCGCCTGG CAGCTGTTCGGCCAG TAC CCGGCCGTCCAGCTG TTTTTGCCAGTGCAT Pput_2668 3050687 - 3049329 - | hypothetical protein Pput_2669 3052681 - 3050726 - | hypothetical protein Pput_2670 3053334 - 3052759 - | hypothetical protein TERM 2436 3053490 - 3053508 + H 74 -4.5 -4.82901 | opp_overlap 3053487 GGCTATAAAACCCGT GCACCTG CAAGC CAAGTGC TTTTTGTAGCAACAG Pput_2671 3053582 - 3054613 + | helix-turn-helix domain-containing protein Pput_2672 3054908 - 3054576 - | Rieske (2Fe-2S) domain-containing protein Pput_2673 3055558 - 3054905 - | DSBA oxidoreductase TERM 2437 3055093 - 3055147 + g 91 -17.9 -3.15544 | opp_overlap 3055121 CCTGCACGGCCTTGA GCCCGCAACTCTCGGCGAT-GCCGAGC AAC GTGCGGCTATCGCCGAG-GTCGCGGCC TTGGTGGAAATAGGC Pput_2674 3056843 - 3055563 - | major facilitator transporter Pput_2675 3058023 - 3056971 - | hypothetical protein Pput_2676 3058926 - 3058078 - | taurine dioxygenase Pput_2677 3059920 - 3058940 - | alcohol dehydrogenase Pput_2678 3060149 - 3060355 + | hypothetical protein Pput_2679 3060757 - 3060398 - | hypothetical protein Pput_2680 3060925 - 3061125 + | hypothetical protein Pput_2681 3061684 - 3061349 - | hypothetical protein TERM 2438 3061833 - 3061814 - R 86 -7.8 -4.9725 | opp_overlap 3061814 3061812 ATCGGCAGACAAAAA GCCCGC TCTCGACG GCGGGC TATTGGTGTGGGGTT Pput_2682 3062304 - 3061855 - | hypothetical protein Pput_2683 3062518 - 3062420 - | hypothetical protein Pput_2684 3062914 - 3062627 - | hypothetical protein TERM 2439 3063056 - 3063090 + H 74 -10.6 -3.64822 | overlap 3063055 CATTCAGTGCATCCA GTCCGCCCGTTGGCGG GTA TTGCTAGTGGGCGGCC TTTGACTGCCCAGCT Pput_2685 3063130 - 3063657 + | hypothetical protein Pput_2686 3063701 - 3064309 + | RNA polymerase sigma factor Pput_2687 3064306 - 3064998 + | hypothetical protein TERM 2440 3065030 - 3065006 - T 71 -8.5 -3.8766 | overlap 3065007 3065019 3065022 TGATATGACACGAAA GGGCCGCAG AACATGA CTGCGGCCT TCGCAAGGCTGGAAG TERM 2441 3065029 - 3065007 - T 73 -12 -2.92114 | overlap 3065006 3065019 3065022 GATATGACACGAAAG GGCCGCAG AACATGA CTGCGGCC TTCGCAAGGCTGGAA Pput_2688 3065309 - 3065052 - | hypothetical protein Pput_2689 3067097 - 3065700 - | major facilitator transporter Pput_2690 3067675 - 3067238 - | 3-dehydroquinate dehydratase Pput_2691 3068498 - 3067680 - | shikimate 5-dehydrogenase Pput_2692 3069727 - 3068495 - | L-carnitine dehydratase/bile acid-inducible protein F Pput_2693 3070179 - 3069724 - | dehydratase Pput_2694 3070574 - 3070176 - | hypothetical protein Pput_2695 3071518 - 3070571 - | 2-dehydropantoate 2-reductase TERM 2442 3071890 - 3071910 + G 76 -8.1 -4.18802 | overlap 3071907 GGAGCCACAGTTCAT CGCCGCCAC AGC GCAGCGGCG TTTTCGCCTGTGTGT Pput_2696 3071579 - 3072511 + | LysR family transcriptional regulator TERM 2443 3072784 - 3072794 + G 74 -4.6 -4.58283 | opp_overlap 3072784, overlap 3072789 AAAATTTATACGAAG CCGG TGT CTGG TTTTTCCGGGCCTTC Pput_2697 3072654 - 3074657 + | hypothetical protein Pput_2698 3075615 - 3074854 - | short-chain dehydrogenase/reductase SDR Pput_2699 3077291 - 3076035 - | NADH:flavin oxidoreductase/NADH oxidase TERM 2444 3076216 - 3076232 + g 74 -2.1 -4.86385 | ACTACTGCCATGTTT GCCAAGG ATG CGATGGC TTTGTTTTTCCAGGT TERM 2445 3076550 - 3076572 + g 100 -16.4 -4.66953 | CCATGTCTACGCCCA GGTCGTTGAG CCA CTCAACGACC TTTTTCGCGTCTTCG TERM 2446 3076919 - 3076945 + g 81 -4.3 -5.00884 | gap 1 ACATTGTGCCCAGTT CCAGCGGCACGG CTGA CGGTGCC-CAGG TTTTTTGCCCAAGAT Pput_2700 3077647 - 3078396 + | ThiJ/PfpI domain-containing protein Pput_2701 3078511 - 3079437 + | hypothetical protein TERM 2447 3079447 - 3079477 + T 100 -10.4 -5.37345 | CGCTGAGACCTTTTG CGCCTGTCAGGC CCCGGAA GCCTGGCGGGTG TTTTTTCTCGTTGAA Pput_2702 3079932 - 3079453 - | MerR family transcriptional regulator TERM 2448 3079781 - 3079763 - G 84 -2.3 -5.27335 | gap 1, opp_overlap 3079763 TCCTCCAAAGAAAAA CCTGCCGC CTGT GCG-CTGG TTATAAGTTGCAGCA TERM 2449 3079986 - 3080024 + r 75 -9.7 -3.72576 | gap 2, opp_overlap 3079964 3079986, overlap 3079989 TTAAGTCTAAAGTCA TC-GGGCGGCCAAG-CACA ACG TGTGACTTGGTCGCCTTGG TTTCATAGGGAAGCG TERM 2450 3079989 - 3080020 + r 91 -16 -3.56704 | gap 1, opp_overlap 3079986, overlap 3079986 AGTCTAAAGTCATCG GGCGGCCAAG-CACA ACG TGTGACTTGGTCGCC TTGGTTTCATAGGGA Pput_2703 3080864 - 3080070 - | short-chain dehydrogenase/reductase SDR Pput_2704 3081924 - 3080911 - | alcohol dehydrogenase Pput_2705 3082024 - 3082467 + | HxlR family transcriptional regulator Pput_2706 3083479 - 3082598 - | LysR family transcriptional regulator TERM 2451 3083495 - 3083518 + H 77 -11.8 -3.3573 | overlap 3083487 3083517 ACTGTCGGTCATTCC TGGCTTTGCG AATA TGCAAAGCCA TTATGCAATGATTTC TERM 2452 3084383 - 3084405 + G 81 -6.9 -4.78149 | overlap 3084374 3084373 3084384 GTGGTACAGGGCAAG TTGCCCGGG TTGAT CCCTGGCAG TTTTTCCATTGTCGA Pput_2707 3083789 - 3084817 + | NAD-dependent epimerase/dehydratase Pput_2708 3085119 - 3085634 + | hypothetical protein Pput_2709 3085631 - 3085846 + | hypothetical protein Pput_2710 3086866 - 3085865 - | alcohol dehydrogenase TERM 2453 3086794 - 3086773 - G 73 -6.6 -4.2679 | gap 1 GAATCCGCACCAAAA CCTGT-CCC TTACC GGGCACAGG GCGGGCGATGTGGCG TERM 2454 3087297 - 3087311 + G 79 -8.5 -4.36914 | GAGGCTGTGCATAGC GCCCC TGATC GGGGC TTTTCTACAGCGCCA Pput_2711 3086974 - 3087852 + | LysR family transcriptional regulator Pput_2712 3088736 - 3087915 - | helix-turn-helix domain-containing protein Pput_2713 3088866 - 3089384 + | uncharacterized peroxidase-related enzyme Pput_2714 3089398 - 3089652 + | glutaredoxin 3 TERM 2455 3089661 - 3089691 + T 71 -12 -2.79188 | gap 1, overlap 3089659 CGCTTGAAGTGTAGA GTGCTCCGGCATG TGACCC CAT-CCGGAGCAC TGCTTGCGTTCACTC Pput_2715 3090838 - 3089744 - | GCN5-related N-acetyltransferase TERM 2456 3092265 - 3092222 - g 82 -14.4 -3.39327 | overlap 3092228 CTGGCAGATCTACAA CCACAAGGCCCAGGCCGGCG AAGT CAACGGCCTGTGCCGCGCGG TCCCGGTGGAACAGG TERM 2457 3092259 - 3092228 - g 81 -13.6 -3.57039 | overlap 3092222 GATCTACAACCACAA GGCCCAGGCCGGCG AAGT CAACGGCCTGTGCC GCGCGGTCCCGGTGG Pput_2716 3090933 - 3092513 + | RimK domain-containing protein ATP-grasp Pput_2717 3092517 - 3093428 + | Mg2+ transporter protein, CorA family protein Pput_2718 3094124 - 3093738 - | antibiotic biosynthesis monooxygenase TERM 2458 3094112 - 3094089 - G 73 -11 -3.57144 | opp_overlap 3094091, overlap 3094091 CTGGTCAGTTGCAAA GAGCAGGCAC GGTA GTGCCTGCTT CAATGTGTGCATGCG TERM 2459 3094110 - 3094091 - G 77 -13.6 -3.36515 | opp_overlap 3094091, overlap 3094089 GGTCAGTTGCAAAGA GCAGGCAC GGTA GTGCCTGC TTCAATGTGTGCATG TERM 2460 3094091 - 3094110 + g 76 -13.6 -3.16475 | opp_overlap 3094091 3094089 GGTCAGTTGCAAAGA GCAGGCAC GGTA GTGCCTGC TTCAATGTGTGCATG Pput_2719 3095250 - 3094243 - | zinc-binding alcohol dehydrogenase TERM 2461 3095329 - 3095317 - H 93 -10.5 -4.56597 | GGCGTCCGGGAAAAA CGGGC CCT GCCCG TCAACACTTTCATTG Pput_2720 3095356 - 3096246 + | LysR family transcriptional regulator TERM 2462 3096410 - 3096393 - g 78 -3.3 -5.08169 | ACACACGCGAAAAAA TCCTGGC GACT GCCGAGA AGCTGATTTACGAAA Pput_2721 3096359 - 3096943 + | TetR family transcriptional regulator Pput_2722 3096991 - 3097467 + | hypothetical protein TERM 2463 3097479 - 3097504 + T 82 -8.3 -4.56597 | GTAAGTCATGCTAAA CCTGATCCTTT AGAT AGGGGGTCAGG TTTTTCGCACAGAGC Pput_2723 3098485 - 3097544 - | helix-turn-helix domain-containing protein TERM 2464 3098425 - 3098403 - G 78 -9.8 -4.06419 | TCTGCCGACAAACAA TGGCGGCAGA CCA CCTCCCGCCA GTAATCAAAGCGACG TERM 2465 3098611 - 3098624 + H 70 -9.5 -3.53811 | GCCTTCGTCCTTATA GCGCC AACA GGCGC TTTCCAAAACCTCCC Pput_2724 3099015 - 3100073 + | phenylacetaldoxime dehydratase TERM 2466 3100092 - 3100126 + F 71 -4.9 -4.57073 | gap 1, overlap 3100092 3100095 CCAACTCCACGTTTA GCCCCTCACCTGCCGT CCCT GCGGCAG-TGGGGCTC TTTTTGCCCAGAATA Pput_2725 3100156 - 3101022 + | meta-pathway phenol degradation-like protein Pput_2726 3101076 - 3101600 + | globin TERM 2467 3102118 - 3102133 + G 76 -6.8 -4.41206 | gap 1, opp_overlap 3102114, overlap 3102131 CGATGATGAACGGTG CCGCGCC ACT GGC-CGG TTTTGTACCGTCATT Pput_2727 3101790 - 3103304 + | amidase Pput_2728 3103393 - 3103974 + | nitrile hydratase, alpha subunit Pput_2729 3104016 - 3104678 + | nitrile hydratase TERM 2468 3104944 - 3104964 + G 71 -9 -3.78067 | gap 1, opp_overlap 3104943 3104940, overlap 3104905 GCTTGAGCAGATCAG CGC-GCTGG CGCG CCAGCAGCG TTTCGATTACCTGTT Pput_2730 3104675 - 3105937 + | cobalamin synthesis protein, P47K TERM 2469 3105918 - 3105929 + F 79 -7.2 -4.5442 | AAACGCAGTCATTAC CGGC TGAT GCCG TTTTCTAGTTGGAGG Pput_2731 3105951 - 3107243 + | methyl-accepting chemotaxis sensory transducer Pput_2732 3108173 - 3107304 - | hypothetical protein Pput_2733 3108295 - 3109677 + | GntR family transcriptional regulator Pput_2734 3111086 - 3109806 - | integral membrane sensor signal transduction histidine kinase Pput_2735 3111796 - 3111137 - | two component transcriptional regulator TERM 2470 3111185 - 3111196 + g 77 -2.2 -5.08824 | CACGGTTTCGATCAG TTCG CGTC CGAG TTTTTTACGTAGACG Pput_2736 3111929 - 3112252 + | hypothetical protein Pput_2737 3112344 - 3112814 + | hypothetical protein Pput_2738 3112840 - 3115020 + | oxidoreductase FAD/NAD(P)-binding subunit Pput_2739 3115010 - 3115975 + | ApbE family lipoprotein TERM 2471 3116502 - 3116551 + G 74 -9.1 -3.85698 | gap 1, opp_overlap 3116484, overlap 3116498 TGCAGGCCGCCCTGG CGTCCGCCGCGAGCTTCGTGGTGG GCG CCGCCTTGCCGCTGGCGGTG-ACG TTTGTCGCACCGGAG Pput_2740 3116045 - 3116746 + | hypothetical protein Pput_2741 3116958 - 3117434 + | GCN5-related N-acetyltransferase Pput_2742 3118910 - 3117507 - | response regulator receiver sensor signal transduction histidine kinase Pput_2743 3120721 - 3118907 - | integral membrane sensor signal transduction histidine kinase Pput_2744 3121716 - 3120718 - | cytochrome-c peroxidase Pput_2745 3121914 - 3123284 + | response regulator receiver protein Pput_2746 3123405 - 3124070 + | hypothetical protein Pput_2747 3125016 - 3124687 - | hypothetical protein Pput_2748 3125485 - 3125739 + | hypothetical protein Pput_2749 3125732 - 3126031 + | helix-turn-helix, type 11 domain-containing protein Pput_2750 3126108 - 3126623 + | hypothetical protein dapF 3128104 - 3127298 - | diaminopimelate epimerase Pput_2752 3128372 - 3128953 + | hypothetical protein Pput_2753 3129855 - 3130457 + | OsmC family protein TERM 2472 3131433 - 3131419 - g 76 -11.4 -3.71924 | GAAATGACCGAAGAA GACGGC ATG GCCGTC GCCGAGCTGGAAACC TERM 2473 3131878 - 3131863 - g 71 -4.6 -4.4634 | opp_overlap 3131877 AACGCCAAGAAGAAA GCCCAG ATCG CCGAGC TGCAGACCTTTGTCA Pput_2755 3131086 - 3132672 + | ABC transporter related TERM 2474 3132684 - 3132710 + F 77 -13.7 -3.03159 | opp_overlap 3132678, overlap 3132675 CTGATTGAAGGCCAA GGCCTGGCCAC CTTGT GTGGCTGGGCC TCTTCGCGGGCTTGC Pput_2756 3132848 - 3134041 + | hypothetical protein Pput_2757 3135049 - 3134003 - | hypothetical protein Pput_2758 3135251 - 3136093 + | putative glutathione S-transferase YghU TERM 2475 3136191 - 3136175 - f 88 -15.1 -3.53012 | opp_overlap 3136171 3136170 CCTTGTGTCGCGAAA GGGCCGC GAA GCGGCCC CAGCATTATTTGCAT TERM 2476 3136223 - 3136239 + F 82 -13.7 -3.53012 | GACGCTGAAATCCCG GGGCTGC TGT GCAGCCC TTTCGCGACACAAGG TERM 2477 3136977 - 3136948 - g 73 -11.3 -3.54543 | opp_overlap 3136952 AGCTACCTGGTCAAA GGCTTGACTGCCG CCTC CGGCAGCCCTGCC TTCAAGGACCTGGTC Pput_2760 3136678 - 3138381 + | amidase Pput_2761 3138434 - 3139138 + | YheO domain-containing protein Pput_2762 3139135 - 3140052 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 2478 3140291 - 3140271 - g 81 -7.5 -4.42653 | ACCTCATCGATAAAA CCAAGCTGC TCA GCAACATGG AGAAGATCGCCTACG Pput_2763 3140237 - 3141334 + | carboxynorspermidine decarboxylase TERM 2479 3141859 - 3141839 - g 71 -13.3 -3.01712 | CGGGTGTGGTGAACA GCTACGCCA AGC TGGCGCAGC AACAGTATTTCGACA Pput_2764 3141367 - 3142611 + | saccharopine dehydrogenase TERM 2480 3142619 - 3142650 + T 100 -20.2 -3.53012 | opp_overlap 3142620, overlap 3142620 3142622 3142625 AAGCCTAAGCAACAA ACAGAAGGGGCGCC ACAT GGCGCCCCTTCTGC TTTCCAGGCCCAGCC TERM 2481 3142620 - 3142649 + T 100 -23.7 -2.71712 | opp_overlap 3142620, overlap 3142619 3142622 3142625 AGCCTAAGCAACAAA CAGAAGGGGCGCC ACAT GGCGCCCCTTCTG CTTTCCAGGCCCAGC TERM 2482 3142649 - 3142620 - T 100 -23.7 -4.32951 | opp_overlap 3142620 3142619 3142622 3142625 AGCCTAAGCAACAAA CAGAAGGGGCGCC ACAT GGCGCCCCTTCTG CTTTCCAGGCCCAGC TERM 2483 3142622 - 3142647 + T 100 -20.5 -2.90496 | opp_overlap 3142620, overlap 3142620 3142619 3142625 CCTAAGCAACAAACA GAAGGGGCGCC ACAT GGCGCCCCTTC TGCTTTCCAGGCCCA TERM 2484 3142625 - 3142644 + T 95 -16.4 -3.60151 | opp_overlap 3142620, overlap 3142622 3142620 3142619 AAGCAACAAACAGAA GGGGCGCC ACAT GGCGCCCC TTCTGCTTTCCAGGC Pput_2765 3143804 - 3142758 - | methyltransferase type 12 Pput_2766 3144049 - 3145377 + | UDP-glucose 6-dehydrogenase Pput_2767 3147006 - 3145387 - | malate:quinone oxidoreductase TERM 2485 3147834 - 3147810 - g 74 -14.3 -2.55722 | opp_overlap 3147808, overlap 3147806 AGAGCACCCAAGTCA TCGTCGGCGCC GAC AGCACCGACGA CAGTACCTTGCTGCG Pput_2768 3147149 - 3148369 + | radical SAM domain-containing protein Pput_2769 3148366 - 3149208 + | hypothetical protein TERM 2486 3149276 - 3149306 + T 77 -11.9 -3.28712 | opp_overlap 3149265 3149279 3149281, overlap 3149279 3149282 ACATCATGCTCAACT GAAGAGCCTGGCC AGGCA GGCCAGCTTCTTC TTGTACGAACGCCGC Pput_2770 3150241 - 3149270 - | urea amidolyase related protein TERM 2487 3149857 - 3149828 - G 76 -10.7 -3.72576 | gap 1, overlap 3149829 TTTGCGCCCATGAAA GCCACCCAACGCGC CTA GCGCG-TAGGTGGA CCGGCTACCCAGTAC TERM 2488 3149856 - 3149829 - G 77 -14.2 -2.83403 | gap 1, overlap 3149828 TTGCGCCCATGAAAG CCACCCAACGCGC CTA GCGCG-TAGGTGG ACCGGCTACCCAGTA Pput_2771 3151125 - 3150238 - | allophanate hydrolase subunit 1 TERM 2489 3150318 - 3150307 - G 72 -7.2 -4.18018 | overlap 3150292 GGCGTCCAGGGAAAA CGCC ACCG GGCG AATGCGCAGGTCGAA Pput_2772 3151976 - 3151218 - | hypothetical protein Pput_2773 3152097 - 3153014 + | LysR family transcriptional regulator Pput_2774 3153206 - 3155272 + | trehalose synthase Pput_2775 3155445 - 3156074 + | riboflavin synthase subunit alpha TERM 2490 3156539 - 3156559 + G 71 -11.1 -3.53091 | overlap 3156548 CATTGGCCTGACTTA CGTGACGGG CGC CCTGTCGCG TTTCGGCCGCGGCCT TERM 2491 3156648 - 3156665 + G 72 -14.1 -2.70932 | GCCGGGATGTTGCTG GGCGCCG CGCT CGGCGCC TGGTTGCAACAACAC Pput_2776 3156084 - 3156785 + | hypothetical protein Pput_2777 3158288 - 3156786 - | proline/glycine betaine transporter TERM 2492 3157688 - 3157677 - G 73 -3.6 -4.72986 | CAGGGCCAGGAAAAA CGGC AGGC GCCA ACCCCATTCGAGGAA TERM 2493 3158145 - 3158124 - G 72 -3.7 -4.56597 | gap 1, overlap 3158126 GGCGTTGGGGAAAAA CACCT-TGCC CAA GGCATAAGCG ACGAAGCCATAGACC TERM 2494 3158425 - 3158406 - R 100 -15 -4.86731 | opp_overlap 3158406 GGCGCCCAAAGAAAA GCCGCTGC AATG GCAGCGGC TTTCATGCCCAAGGC TERM 2495 3158406 - 3158425 + r 95 -15 -3.72576 | opp_overlap 3158406 GGCGCCCAAAGAAAA GCCGCTGC AATG GCAGCGGC TTTCATGCCCAAGGC Pput_2778 3159421 - 3158447 - | delta-aminolevulinic acid dehydratase TERM 2496 3159583 - 3159557 - R 73 -8.6 -4.07568 | opp_overlap 3159557 3159571, overlap 3159571 TCTTCGCGGGCAAAA CCGCGCCCACAA ATC CCGTAGGTGCGG GTTTACCCGAGAAGA Pput_2779 3160510 - 3159617 - | protein of unknown function RIO1 Pput_2780 3161989 - 3160598 - | GABA permease TERM 2497 3162102 - 3162064 - R 87 -9.5 -4.58395 | opp_overlap 3162065, overlap 3162065 CGCAGGCGCGAAAAA GCCCGCCCTGCCCTG AATGGTGAG CAGGGCAGTACGGGT TGAGTAAAACGAAAC TERM 2498 3162101 - 3162065 - R 78 -13 -3.34716 | opp_overlap 3162065, overlap 3162064 GCAGGCGCGAAAAAG CCCGCCCTGCCCTG AATGGTGAG CAGGGCAGTACGGG TTGAGTAAAACGAAA Pput_2781 3163390 - 3162140 - | hypothetical protein TERM 2499 3163234 - 3163250 + g 71 -13.7 -2.5294 | opp_overlap 3163231, overlap 3163231 GGGTGTAATACACGC CGGCGTG GAT CACGCCG CTGTTATGGCCGGTC TERM 2500 3163421 - 3163458 + r 72 -5.7 -4.36914 | gap 3, opp_overlap 3163433, overlap 3163423 3163424 3163426 GCAGGCATTGCCTGG CAG-GCTCACCAAGGCCC GCACG GGGCC-TGGTG-GCATTG TTTTGTGCAAAAACG TERM 2501 3163496 - 3163472 - R 100 -15 -4.56597 | gap 1, opp_overlap 3163476 3163481 TGTTTTGTGCAAAAA CGCGTGGGCGG GCGC CCGCCC-CGCG CCCTGTCATTATTGC Pput_2782 3164482 - 3163505 - | hypothetical protein Pput_2783 3164573 - 3165373 + | DNA-binding transcriptional regulator CsiR Pput_2784 3165448 - 3166128 + | two component transcriptional regulator TERM 2502 3167034 - 3167076 + G 76 -5.5 -4.67011 | AGCGCCGCGCCGGCT TCGTCCAGCTTGACCCGCA TGAAC TGCTGGTAGAACTGCACGA TTTTTACCTGCCATT Pput_2785 3166106 - 3167497 + | integral membrane sensor signal transduction histidine kinase TERM 2503 3167526 - 3167500 - T 81 -9.2 -4.43477 | opp_overlap 3167500 CCTAGTGAAGTAAAA GCGGGGGGCTGC TTT GCGGCCCTTCGC GGGCACGCACGCTCC cysS 3169010 - 3167628 - | cysteinyl-tRNA synthetase Pput_2787 3170723 - 3169020 - | glutaminyl-tRNA synthetase TERM 2504 3171418 - 3171392 - g 74 -5.1 -4.66609 | overlap 3171410 3171411 GACGCCATCGAAAAA GTGGCCACC GGTTCCAAA GCTGGCCAC CAGGACGTACCGAAG Pput_2788 3170882 - 3171472 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2505 3171528 - 3171508 - g 81 -11.8 -3.95324 | opp_overlap 3171508 CACCTGCAAGAAGAA CGCCCGGA TATTT CCCGGGCG TTTCTTGATCTGCTC TERM 2506 3171508 - 3171528 + G 89 -11.1 -4.30177 | opp_overlap 3171508 CACCTGCAAGAAGAA CGCCCGG ATATTTC CCGGGCG TTTCTTGATCTGCTC Pput_2789 3171469 - 3172191 + | UDP-2,3-diacylglucosamine hydrolase TERM 2507 3172221 - 3172278 + T 72 -10.6 -3.53444 | gap 3, opp_overlap 3172221 TTCTTCGCGGGTAAA CCCGCTCCCACAGGCTCCGCATCAACGCT GCA AGCG--GA-GCGATTCCTGTGAGAGCGGG TTTACCCGCGAATGG TERM 2508 3172278 - 3172221 - T 88 -15 -3.53012 | gap 3, opp_overlap 3172221 TTCTTCGCGGGTAAA CCCGCTCCCACAGGCTCCGCATCAACGCT GCA AGCG--GA-GCGATTCCTGTGAGAGCGGG TTTACCCGCGAATGG Pput_2790 3174604 - 3172313 - | peptidase S45, penicillin amidase TERM 2509 3173078 - 3173042 - G 71 -13.2 -3.10715 | gap 2 TTCATCAGCACCTAA CCGGGCTTTGCCCTGCAG GCG CTGCAAGGCAAAG-C-GG CCACGCATGCCCAGC Pput_2791 3174822 - 3175196 + | hypothetical protein Pput_2792 3175421 - 3175233 - | hypothetical protein Pput_2793 3175573 - 3176031 + | hypothetical protein Pput_2794 3176283 - 3176663 + | hypothetical protein Pput_2795 3176729 - 3177373 + | hypothetical protein Pput_2796 3177469 - 3178002 + | hypothetical protein Pput_2797 3181642 - 3178022 - | hypothetical protein TERM 2510 3178256 - 3178232 - G 70 -9.9 -3.61178 | opp_overlap 3178222 GGTATCCAGCTGAAA GTCGTCGATCC CCA GGCTCGACGCC AGGCTGCCGGTTATG TERM 2511 3180139 - 3180092 - G 72 -11.8 -3.28924 | opp_overlap 3180095 CAGCCTTGGCCACAA CTGGCCCAGGCGCGGCAAGTCA AGGT CGACTTGCCCCGCCAGGCGCTG TTGCACGCTGCCACT TERM 2512 3180095 - 3180137 + g 81 -15.6 -3.03124 | gap 1, opp_overlap 3180092 CCTTGGCCACAACTG GC-CCAGGCGCGGCAAGTC AAGGTC GACTTGCCCCGCCAGGCGC TGTTGCACGCTGCCA TERM 2513 3181056 - 3181096 + g 72 -2 -4.8048 | overlap 3181057 3181064 GCGAGCTCCAGCGTC TTCT-GCAATTGGCCATTGG CCG TCAGTG-CCAGTTGCCAGGG TTTTTCGTCTACCGC Pput_2798 3183444 - 3181693 - | surface antigen (D15) TERM 2514 3183480 - 3183454 - R 71 -12.3 -2.79796 | gap 1, opp_overlap 3183470, overlap 3183471 GCGCATGCTACCAGA GCCAGGC-GCTC AAGG GAGCCGCCCGGC GGCCTGTTCAGGCAA Pput_2799 3184138 - 3183488 - | GCN5-related N-acetyltransferase TERM 2515 3184498 - 3184481 - g 71 -8.4 -3.88291 | opp_overlap 3184480 TACCATGGCCAGAAA GGCCAC TACGGC GTGGCC CTGCTGTCGCGCCAG Pput_2800 3184301 - 3185113 + | exonuclease III Pput_2801 3185906 - 3185154 - | putative transmembrane anti-sigma factor TERM 2516 3185678 - 3185628 - G 76 -13.9 -3.12351 | GCCCCCCACACCCAA CGCCAGCATCACCACCGCCGCCG CCGCC CAACGCCGCTGCCGACGCTGGCG CAATTGCCGACGCAA Pput_2802 3186424 - 3185903 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2517 3186606 - 3186635 + G 74 -10 -3.7108 | gap 1 CGCCTGGCCGCCATT GCCGGCGTGCTGC TGGCC GCAG-GTGCCGGC TTTGCCTATGCCGCT Pput_2803 3186549 - 3187601 + | catalase domain-containing protein Pput_2804 3187598 - 3188131 + | cytochrome B561 Pput_2805 3188213 - 3189418 + | major facilitator transporter Pput_2806 3189500 - 3190045 + | XRE family transcriptional regulator Pput_2807 3190048 - 3190347 + | hypothetical protein Pput_2808 3190934 - 3190320 - | DSBA oxidoreductase TERM 2518 3190434 - 3190472 + g 81 -7.4 -4.44548 | gap 2, opp_overlap 3190414 3190413 3190411 3190430, overlap 3190436 CGCGCCAAACACCCC GC-GCGCCACAGC-GGCC TCGGT GGCCTGCTTTAGCGCTGC TTTTACTTCGCTGTC Pput_2809 3191695 - 3190964 - | short-chain dehydrogenase/reductase SDR TERM 2519 3192020 - 3191990 - g 73 -13.2 -3.1478 | opp_overlap 3191967, overlap 3191988 AGGAGCTGAGCAACA GCCCCCTGGCACGC CTG GCTTGCCAAGGCGC CAACCGCGAACGCCT Pput_2810 3191785 - 3192348 + | TetR family transcriptional regulator Pput_2811 3192335 - 3192928 + | hypothetical protein TERM 2520 3193249 - 3193212 - T 70 -12.1 -2.62515 | opp_overlap 3193202, overlap 3193216 AACCCCTTGATACGA CCAAGCTTTTCAGCGCT GAGC ACCGCAGAAAAGCTTGA CCGCCAACACAGTAT Pput_2812 3194288 - 3193287 - | bile acid:sodium symporter TERM 2521 3193426 - 3193456 + g 72 -3.9 -4.63218 | gap 1, opp_overlap 3193425 3193427, overlap 3193427 CTGCCCACGAACAAC ACCTGGGCCATGGG CACA CCCGTAGCC-AGGC TTTTCTTGGAGCCGG TERM 2522 3194908 - 3194926 + G 71 -13.2 -3.06915 | overlap 3194911 CCAGCGCTGCTACTC CAACCCCA GCC TGGGGTTG TTCGGTGACCTGGCT TERM 2523 3194911 - 3194923 + G 71 -9.1 -3.68073 | overlap 3194908 GCGCTGCTACTCCAA CCCCA GCC TGGGG TTGTTCGGTGACCTG ampC 3194396 - 3195538 + | beta-lactamase Pput_2814 3195839 - 3196171 + | hypothetical protein TERM 2524 3196213 - 3196192 - T 79 -14.4 -2.79183 | opp_overlap 3196192 CGCACCCTTACCAGA GCCCGGCC CGCATT GGCCGGGC TTTTTCATGCCTGGC TERM 2525 3196192 - 3196213 + T 100 -14.4 -4.7497 | opp_overlap 3196192 CGCACCCTTACCAGA GCCCGGCC CGCATT GGCCGGGC TTTTTCATGCCTGGC Pput_2815 3196529 - 3196218 - | hypothetical protein TERM 2526 3196653 - 3196636 - R 100 -14.1 -5.19251 | GAATAGCAATAAAAA CCCCGCC GTTG GGCGGGG CGTGTGCAGACGCGG Pput_2816 3197318 - 3196998 - | hypothetical protein Pput_2817 3198273 - 3197389 - | hypothetical protein Pput_2818 3199191 - 3198436 - | hypothetical protein Pput_2819 3200257 - 3199214 - | spermidine/putrescine-binding periplasmic protein-like protein TERM 2527 3200274 - 3200291 + H 91 -9.1 -5.06116 | gap 1 GTAGTTTCCTCCTGG CGGTGCCC GAC GGGC-CCG TTTTCTTGTTGTTTT TERM 2528 3200425 - 3200407 - H 71 -4.4 -4.58943 | overlap 3200410 TTGATAGAAAAATAA CAACACCG TAC CGGAGCCG CCTGTATGCAGACCG TERM 2529 3201532 - 3201548 + G 76 -15.1 -2.53876 | opp_overlap 3201542 3201543, overlap 3201542 ATTTCCTGCATCCAG CGCCCGG AAA CCGGGCG TGAGTTGCAGTACGG TERM 2530 3201578 - 3201542 - g 70 -10.1 -3.53811 | opp_overlap 3201532 3201542, overlap 3201543 TCCAGCGCCCGGAAA CCGGGCGTGAGTTGC AGTACGG GCACCTCACGCCCAC TTCCTCGCCCAAGCG TERM 2531 3201577 - 3201543 - g 72 -13.6 -2.72144 | opp_overlap 3201532 3201542, overlap 3201542 CCAGCGCCCGGAAAC CGGGCGTGAGTTGC AGTACGG GCACCTCACGCCCA CTTCCTCGCCCAAGC TERM 2532 3202067 - 3202084 + G 70 -7.7 -4.0641 | gap 1 TCAACGGCACTCATT GCGGCGAG AGC CT-GCCGC TTTATGTACGTGACC Pput_2820 3200431 - 3202383 + | NADH:flavin oxidoreductase/NADH oxidase Pput_2821 3202423 - 3203022 + | XRE family transcriptional regulator Pput_2822 3203103 - 3204305 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pput_2823 3204985 - 3204374 - | azoreductase Pput_2824 3205119 - 3206021 + | LysR family transcriptional regulator Pput_2825 3206014 - 3206373 + | hypothetical protein Pput_2826 3206845 - 3206432 - | hypothetical protein Pput_2827 3207668 - 3206838 - | undecaprenyl pyrophosphate phosphatase Pput_2828 3207969 - 3209603 + | methyl-accepting chemotaxis sensory transducer TERM 2533 3209766 - 3209750 - f 88 -15.1 -3.53012 | CCTTGTGTCGCGAAA GGGCCGC GTA GCGGCCC CCGACAATCTGCGCA TERM 2534 3209945 - 3209984 + F 73 -9.3 -3.87815 | gap 2, opp_overlap 3209972 GAAGCAGAGTGACCA GGATGCGGCGGGGCGCTGG TAAT CAAG-GCGCCGCCG-ATCC TTTGTGGGCATGCCC Pput_2829 3210153 - 3210719 + | nicotinamide mononucleotide transporter PnuC Pput_2830 3210716 - 3211285 + | hypothetical protein TERM 2535 3211367 - 3211323 - f 72 -9.9 -3.56594 | opp_overlap 3211306, overlap 3211313 GCAAAGCCCCCGAAA TTGCGGGGCTTGACCCTGTCC TGG GGGCAGTGTCAAGCCCGTGAA ACACACTTGCAAAAA Pput_2831 3211583 - 3212020 + | hypothetical protein TERM 2536 3212349 - 3212309 - g 73 -12.5 -3.14881 | overlap 3212287 CAACGCTTTCAGCAA CGGCAGCGGCGCCCTGG GGGTCAA CCAGAGCGCAGGTGCCA ACACCCAGCAAGCCA Pput_2832 3212022 - 3212600 + | hypothetical protein TERM 2537 3213093 - 3213069 - g 79 -9.3 -4.12857 | opp_overlap 3213069, overlap 3213056 AACCAGCAGAAACAA CCGGGTCGA CAACTAT TCGACCCAG TCTTCGGCTGTGATG Pput_2833 3212650 - 3214101 + | hypothetical protein TERM 2538 3214115 - 3214132 + F 100 -14.1 -4.15044 | GACCGCTGTGCTTGA GGCCCCC TTCG GGGGGCC TTTCTTCAACACACC TERM 2539 3214354 - 3214315 - g 74 -4.8 -4.63218 | gap 1 CCTGGTGCAACAAAA GACCGACTTCAGCTGCGGC GCC GCCGC-GCTGGCGACCATC CTGCGCCAGGCGTAC Pput_2834 3214163 - 3214843 + | peptidase C39, bacteriocin processing TERM 2540 3215175 - 3215159 - g 91 -9.3 -4.55689 | ATGATCGATAGAAAA GGCGCAG GTA CGGCGCC GAGCAGCGCGTCTGC TERM 2541 3215377 - 3215345 - g 76 -13.3 -3.41745 | overlap 3215320 3215315 3215339 GCCGTACAACAGCAA GGCCAGGTACTGGCC GCC GGCCAGACCCTGGTC GGGGAAAATGGCGCC Pput_2835 3214889 - 3215641 + | hypothetical protein Pput_2836 3215688 - 3216968 + | hypothetical protein TERM 2542 3216981 - 3217006 + F 100 -16.1 -3.90291 | TGATAGTTGCCATCG GCCGGGCCCGT GCGA ACGGGCCCGAC TTTGGTTACAAGCCT Pput_2837 3217104 - 3219305 + | sulfatase Pput_2838 3219400 - 3220128 + | protein of unknown function DUF899, thioredoxin family protein TERM 2543 3220188 - 3220172 - T 78 -13.7 -3.09516 | opp_overlap 3220183 3220183, overlap 3220174 GGTTTTACCAGCGAA CACCGGC AGA GCCGGTG CCATCCACCGCGTTG TERM 2544 3220581 - 3220557 - T 72 -3.5 -4.71223 | opp_overlap 3220557, overlap 3220548 3220559 CGACAATACAGAAAA TAGACGTTGTA TTA TTCAGCGTCCA CTTTGCCGTATTGAA Pput_2839 3223036 - 3220568 - | phosphatidylinositol-specific phospholipase C, X region TERM 2545 3223181 - 3223156 - R 95 -7.5 -5.63374 | gap 1 CGAAGACGAAAAAAA CCCCGGAAAGCC TTG AGCTA-CCGGGG CCAGTGCGCCCTGGC Pput_2840 3223928 - 3223305 - | urease accessory protein UreG Pput_2841 3224614 - 3223940 - | urease accessory protein UreF TERM 2546 3224028 - 3223986 - G 76 -13.5 -3.16564 | gap 2 TCGTGACGCGATGAA GCGATGGCCAGC--AGCGGCA GGC CGCCGCCAAGCTGGTCATCGC CCAGGGCCAGTGCCT TERM 2547 3224574 - 3224550 - G 76 -7.8 -4.28254 | gap 1, overlap 3224543 TGCGAATAGGTAAAA CCACCCACCGG CAAG CCGG-GGCTGG CCAACTGCAGTAGGC Pput_2842 3225159 - 3224614 - | HupE/UreJ protein ureE 3225681 - 3225178 - | urease accessory protein UreE ureC 3227394 - 3225691 - | urease subunit alpha ureB 3227744 - 3227391 - | urease subunit beta ureA 3228030 - 3227728 - | urease subunit gamma Pput_2847 3228876 - 3228040 - | urease accessory protein UreD Pput_2848 3230063 - 3229149 - | phage integrase family protein Pput_2849 3230280 - 3231461 + | NnrS family protein Pput_2850 3233820 - 3231559 - | DEAD_2 domain-containing protein TERM 2548 3233133 - 3233119 - G 87 -5.7 -5.24129 | overlap 3233121 3233122 GGCGGTGAGAAAAAA CAGCT TGTCC AGCTG CTGCGGCACCATGGC TERM 2549 3233168 - 3233121 - G 71 -5.6 -4.25873 | gap 2, overlap 3233119 3233122 CGGTGAGAAAAAACA GCTTG-TCCAGCTGCTG-CGGC ACCATG GCCTTCAGCAGCGGGAACAAGG TACCAAGGGTTTTGC Pput_2851 3235466 - 3233817 - | VRR-NUC domain-containing protein TERM 2550 3234318 - 3234336 + g 72 -7.4 -4.12188 | opp_overlap 3234318 3234321, overlap 3234321 GCACAACAGGCCAAA CAGGCTGT TGA ACAGCGTG TTTTCCACGTAATGC TERM 2551 3235590 - 3235558 - R 70 -9.7 -3.48064 | overlap 3235550 3235559 GTCACAATCAACCAA GGGTTCAGGGGCTGC ACT GCAGCCCCCGTAGCG TTCACGCCTGTTCAG TERM 2552 3235589 - 3235559 - R 73 -13.2 -2.68356 | overlap 3235550 3235558 TCACAATCAACCAAG GGTTCAGGGGCTGC ACT GCAGCCCCCGTAGC GTTCACGCCTGTTCA Pput_2852 3236908 - 3235592 - | major facilitator transporter Pput_2853 3238240 - 3236999 - | fumarylacetoacetate (FAA) hydrolase family protein-like protein TERM 2553 3237240 - 3237257 + g 74 -5.5 -4.41895 | opp_overlap 3237230, overlap 3237233 AGGAACAGCACCAGG CCGTCAG GGTA CTGGTGG TTTTCGTTGAGGGTT Pput_2854 3239295 - 3238237 - | malate/L-lactate dehydrogenase Pput_2855 3240872 - 3239331 - | Altronate dehydratase TERM 2554 3240637 - 3240601 - G 76 -9.4 -4.07885 | overlap 3240602 TAGTCGCGGGCAAAA TCGCCCATCTGCACGT TGTGC ACGTGCACATGGTCGC CAGCGTCGATCGCCT TERM 2555 3240636 - 3240602 - G 71 -12.9 -3.04517 | overlap 3240601 AGTCGCGGGCAAAAT CGCCCATCTGCACGT TGTGC ACGTGCACATGGTCG CCAGCGTCGATCGCC Pput_2856 3241990 - 3241019 - | LysR family transcriptional regulator Pput_2857 3242965 - 3242018 - | LysR family transcriptional regulator TERM 2556 3243783 - 3243755 - g 73 -13.1 -3.13073 | overlap 3243751 3243753 ACCTGGAGGAAGACA TCCGTCGCGCCAG CAT CCTGCGCGACGAA ATAGGCTGGGAACGC Pput_2858 3243067 - 3244380 + | mandelate racemase/muconate lactonizing protein TERM 2557 3244539 - 3244563 + G 72 -7.2 -4.15044 | gap 1 CAAATTGATGCCACT GCTCATCGTCG TCTA CG-TGATGAGC TTTCTTGACCGCACC TERM 2558 3245237 - 3245254 + G 75 -4.1 -4.71426 | opp_overlap 3245237 ACTTCGTGCACCAGA TCACCAT CTAC ACGGTGA TTTTCTTCCTGCCGG Pput_2859 3244447 - 3245748 + | major facilitator transporter Pput_2860 3247231 - 3245876 - | GntR family transcriptional regulator Pput_2861 3248616 - 3247231 - | hypothetical protein TERM 2559 3247854 - 3247827 - G 77 -14.8 -2.85437 | overlap 3247824 CATCAATAGCAATCA GCCGCACCGGCG CGCG CTCCGGTACGGC GCCTGGAACCGGCTC TERM 2560 3249093 - 3249110 + r 87 -9.8 -4.55491 | opp_overlap 3249093, overlap 3249088 CCCGCGCATAAAAAA CCCGGG ACATTG CCCGGG TTTTCTGCTTGCGTC TERM 2561 3249110 - 3249093 - R 100 -9.8 -5.24129 | opp_overlap 3249088 3249093 CCCGCGCATAAAAAA CCCGGG ACATTG CCCGGG TTTTCTGCTTGCGTC Pput_2862 3250156 - 3249134 - | alcohol dehydrogenase Pput_2863 3250363 - 3251277 + | LysR family transcriptional regulator Pput_2864 3251545 - 3252702 + | phage integrase family protein TERM 2562 3253391 - 3253406 + T 70 -10.4 -3.30124 | opp_overlap 3253389 ACGATTGAACGCACC GCCGAC TTCG GTCGGC TTCTGGAACCTGGAC Pput_2866 3254592 - 3253810 - | regulatory protein, IclR Pput_2867 3254778 - 3255983 + | RND family efflux transporter MFP subunit Pput_2868 3255998 - 3259138 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pput_2869 3259135 - 3260577 + | RND efflux system outer membrane lipoprotein TERM 2563 3260610 - 3260584 - f 89 -11.5 -4.32049 | opp_overlap 3260585, overlap 3260586 CAGAACTGAGCAAAA CAGGCCGCGTC TCTAG GACGCGGCCCT TCATCGCAACAGTGG TERM 2564 3260585 - 3260609 + F 78 -13.5 -3.14344 | opp_overlap 3260584 3260586 AGAACTGAGCAAAAC AGGCCGCGTCT CTA GGACGCGGCCC TTCATCGCAACAGTG TERM 2565 3260608 - 3260586 - f 100 -16.3 -3.75571 | opp_overlap 3260585, overlap 3260584 GAACTGAGCAAAACA GGCCGCGTC TCTAG GACGCGGCC CTTCATCGCAACAGT Pput_2870 3260657 - 3260833 + | hypothetical protein TERM 2566 3260883 - 3260910 + T 95 -18.6 -3.10876 | opp_overlap 3260883, overlap 3260873 3260872 TGGTTGACCACGAAA CCATGCCAGAGT AGCC ACTCTGGCATGG TATTGGCCTATTCTT TERM 2567 3260910 - 3260883 - T 100 -18.6 -3.78775 | opp_overlap 3260873 3260872 3260883 TGGTTGACCACGAAA CCATGCCAGAGT AGCC ACTCTGGCATGG TATTGGCCTATTCTT Pput_2871 3261582 - 3260962 - | response regulator receiver protein TERM 2568 3261503 - 3261482 - G 72 -2.2 -4.7373 | overlap 3261485 CTAGCGGATGAAAAA CACTCGAC ACTCAG GCCGATTG AACGCACCAAGCTGC Pput_2872 3264515 - 3261579 - | multi-sensor signal transduction histidine kinase TERM 2569 3264689 - 3264665 - R 78 -12.9 -3.24289 | opp_overlap 3264670, overlap 3264660 ACGCGAAATAGGCAA GCCAATGGAGC TAC GCTACATTGGC TTCGGGCTGATGCGT Pput_2873 3265787 - 3264729 - | 4-hydroxy-2-ketovalerate aldolase Pput_2874 3266748 - 3265798 - | acetaldehyde dehydrogenase Pput_2875 3267662 - 3266856 - | 4-oxalocrotonate decarboxylase Pput_2876 3268659 - 3267784 - | glyoxalase/bleomycin resistance protein/dioxygenase Pput_2877 3269502 - 3268675 - | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase Pput_2878 3270731 - 3269499 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2570 3269886 - 3269872 - G 71 -12.8 -3.05596 | TAGGTTTCGAGCGAA CGCCGG CCG CCGGCG CGCAGCGGCCAACTG Pput_2879 3271054 - 3270731 - | Rieske (2Fe-2S) domain-containing protein Pput_2880 3271626 - 3271063 - | toluene dioxygenase TERM 2571 3271701 - 3271725 + r 70 -11.3 -3.02739 | opp_overlap 3271691 3271690 CAAATGCGGCCTCTG GCCGGCGCCAC TGC GTGGCGCAAGC TGTCTCTGGATTCAG Pput_2881 3273089 - 3271737 - | ring hydroxylating dioxygenase, alpha subunit Pput_2882 3274016 - 3273186 - | alpha/beta hydrolase fold Pput_2883 3275403 - 3274042 - | membrane protein involved in aromatic hydrocarbon degradation TERM 2572 3274984 - 3275006 + g 95 -10 -4.43879 | GCTGGTCTGGATTCC GTTTTCTGTC TGT GATAGAAAAC TTTTACTTCCATACT Pput_2884 3275718 - 3276020 + | LysR family transcriptional regulator Pput_2885 3276646 - 3276563 - | hypothetical protein Pput_2887 3278306 - 3277239 - | enoyl-CoA hydratase/isomerase Pput_2888 3279750 - 3278698 - | 4-hydroxy-2-ketovalerate aldolase Pput_2889 3280707 - 3279763 - | acetaldehyde dehydrogenase Pput_2890 3281509 - 3280721 - | 4-oxalocrotonate decarboxylase Pput_2891 3282386 - 3281520 - | alpha/beta hydrolase fold Pput_2892 3283127 - 3282504 - | TetR family transcriptional regulator Pput_2893 3283979 - 3283248 - | class II aldolase/adducin family protein TERM 2573 3283736 - 3283709 - G 73 -8.4 -3.98826 | opp_overlap 3283708 3283711, overlap 3283701 GCATGAAGCGACAAA TACCGCCCACGT CCGG ACGTCGCCGGTA GATTTGCTGGTGGAT Pput_2894 3284332 - 3283976 - | Rieske (2Fe-2S) domain-containing protein Pput_2895 3285122 - 3284343 - | short-chain dehydrogenase/reductase SDR Pput_2896 3286057 - 3285119 - | glyoxalase/bleomycin resistance protein/dioxygenase Pput_2897 3286612 - 3286070 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Pput_2898 3287927 - 3286623 - | ring hydroxylating dioxygenase, alpha subunit TERM 2574 3287243 - 3287253 + g 74 -5.4 -4.63527 | TGGCGCCCGAAAAGC CATC ATT GATG TTTTTCAGGTAGTCG Pput_2899 3289168 - 3287960 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2575 3289002 - 3289032 + g 81 -13.2 -3.72695 | TGAGCGCTTGCCTCT GGCCGCAGCATTTC CTT GGATAGCTGCGGCC TTTCATACGGCAAGT TERM 2576 3289199 - 3289216 + r 100 -11.3 -4.94972 | CTCTCGCTTGTATCG CACCCAC GTAC GTGGGTG TTTTTACTTATAATA TERM 2577 3289232 - 3289255 + r 79 -9.7 -4.07885 | opp_overlap 3289230 3289232 3289236, overlap 3289241 TTTTTACTTATAATA CAAACAGAC CAGATT GTCTGTTTG TTTTCAAAAAAAATC TERM 2578 3289241 - 3289251 + r 73 -5.4 -4.64861 | opp_overlap 3289236 3289232 3289230, overlap 3289232 ATAATACAAACAGAC CAGA TTG TCTG TTTGTTTTCAAAAAA Pput_2900 3291324 - 3289375 - | propionyl-CoA synthetase TERM 2579 3290487 - 3290472 - G 72 -2.5 -4.67904 | GAGCAACGTCAAAAA CCGTC TCCATT GACAG CGCCAGGGCAACCGC Pput_2901 3292754 - 3291372 - | membrane protein involved in aromatic hydrocarbon degradation Pput_2902 3293840 - 3292791 - | oxidoreductase FAD-binding subunit TERM 2580 3293951 - 3293965 + r 79 -12.8 -3.53444 | opp_overlap 3293941, overlap 3293939 AACGATGCCAGGTTG GCGCCC TTT GGGCGC TTTCCGCCAAGATCA Pput_2903 3295314 - 3294184 - | fatty acid desaturase TERM 2581 3294962 - 3294946 - G 72 -7.2 -4.16284 | overlap 3294955 ATAGCGCCCAACAAA GCGAGC CAACC GCCCGC GCGAGTGATACAACT Pput_2904 3296853 - 3295369 - | aldehyde dehydrogenase TERM 2582 3296453 - 3296433 - G 79 -11.2 -3.93288 | opp_overlap 3296432 3296433 GCCCATCGAATGAAA TTGGAGGG GTCGT CCCTCCAA GTTTGGAACACCAAC Pput_2905 3297662 - 3296904 - | short-chain dehydrogenase/reductase SDR Pput_2906 3297932 - 3298594 + | dienelactone hydrolase Pput_2907 3298935 - 3299195 + | hypothetical protein Pput_2908 3300126 - 3299506 - | TetR family transcriptional regulator Pput_2910 3300770 - 3300880 + | hypothetical protein Pput_2911 3300933 - 3301145 + | hypothetical protein Pput_2912 3301647 - 3302384 + | hypothetical protein TERM 2583 3302390 - 3302424 + F 100 -24.6 -4.61633 | opp_overlap 3302403 ACGGGGCTGACGCCG CATTGTCAGGCAATGC CCG GCATTGCCTGACAATG TTTTTCACCCTCTCT Pput_2913 3302498 - 3302713 + | phage transcriptional regulator, AlpA Pput_2914 3302717 - 3303595 + | cobyrinic acid a,c-diamide synthase Pput_2915 3303610 - 3305148 + | hypothetical protein Pput_2916 3305165 - 3305716 + | hypothetical protein Pput_2917 3305710 - 3306927 + | hypothetical protein Pput_2918 3307079 - 3307834 + | hypothetical protein Pput_2919 3307831 - 3308325 + | hypothetical protein Pput_2920 3308331 - 3308759 + | single-strand DNA-binding protein Pput_2921 3309117 - 3308854 - | hypothetical protein TERM 2584 3309561 - 3309537 - g 73 -8.6 -4.08767 | gap 1 TGGAGTCGTTGAAAA CGCTG-GCGAA CCAC CTCGCACAGCG CAAGTAACACCCGCC Pput_2922 3309224 - 3309568 + | XRE family transcriptional regulator TERM 2585 3311291 - 3311277 - g 74 -5.6 -4.48713 | opp_overlap 3311284, overlap 3311278 CTGACCAAGAAGAAA CGCAGC CTG GCTGCC TCAGCGGCGGCGCAT Pput_2923 3309666 - 3311630 + | DNA topoisomerase III TERM 2586 3312018 - 3312039 + F 86 -7.3 -5.00616 | TGGTCCAACTCCTCC TAGCCTGAT GACC GTCGGGCTA TTTTTTCGCCAACGA Pput_2925 3312372 - 3312905 + | hypothetical protein TERM 2587 3312923 - 3312950 + F 91 -17.8 -3.35813 | overlap 3312926 CAGTTTGGCCGCTCG CAGCAGGCGCTC TTAG GAGCGCCTGTTG TTCATTCACGTCGGA TERM 2588 3312926 - 3312947 + F 100 -15.9 -3.8186 | overlap 3312923 TTTGGCCGCTCGCAG CAGGCGCTC TTAG GAGCGCCTG TTGTTCATTCACGTC Pput_2926 3312973 - 3313230 + | hypothetical protein Pput_2927 3313297 - 3313791 + | DNA repair protein RadC Pput_2928 3313857 - 3314573 + | hypothetical protein TERM 2589 3314578 - 3314595 + F 93 -8.3 -5.31275 | opp_overlap 3314579, overlap 3314579 CCGAAGACTGACCAA AGCGCCC TCCC GGGCGCC TTTTTTGTGGTAGCC TERM 2590 3314579 - 3314594 + F 83 -11.8 -3.78042 | opp_overlap 3314579, overlap 3314578 CGAAGACTGACCAAA GCGCCC TCCC GGGCGC CTTTTTTGTGGTAGC TERM 2591 3314594 - 3314579 - f 83 -11.8 -3.7948 | opp_overlap 3314579 3314578 CGAAGACTGACCAAA GCGCCC TCCC GGGCGC CTTTTTTGTGGTAGC Pput_2929 3314704 - 3315219 + | hypothetical protein TERM 2592 3315682 - 3315663 - g 71 -8.6 -3.86897 | gap 1, overlap 3315668 TCCAGCGGTGAGAAA GCCA-AGGC CAA GCCTCTGGC CCCACCCTTCACCCT Pput_2930 3315216 - 3315887 + | hypothetical protein Pput_2931 3315898 - 3316617 + | hypothetical protein Pput_2932 3316599 - 3317153 + | lytic transglycosylase, catalytic Pput_2933 3317150 - 3317569 + | hypothetical protein TERM 2593 3318841 - 3318827 - g 72 -4.2 -4.57569 | CCACTCCTGGAAAAA CTCACC AGC GGCAAG ACCGCACAACTGCTC Pput_2934 3317579 - 3319705 + | hypothetical protein Pput_2935 3319740 - 3320468 + | hypothetical protein Pput_2936 3320943 - 3320560 - | glutathione-dependent formaldehyde-activating, GFA Pput_2937 3321033 - 3321989 + | LysR family transcriptional regulator Pput_2938 3322512 - 3322222 - | hypothetical protein Pput_2939 3323438 - 3323046 - | NUDIX hydrolase Pput_2940 3323684 - 3324043 + | hypothetical protein Pput_2941 3324030 - 3324269 + | hypothetical protein Pput_2942 3324285 - 3324662 + | hypothetical protein Pput_2943 3324670 - 3325071 + | hypothetical protein Pput_2944 3325068 - 3325709 + | hypothetical protein Pput_2945 3325706 - 3326512 + | hypothetical protein TERM 2594 3327585 - 3327571 - gf 70 -7.8 -3.97042 | overlap 3327572 GCAGTAGTAATCAAA CCTCGG ACA CCGAGA AGATCCGCGGCGGCC Pput_2946 3326502 - 3328010 + | hypothetical protein Pput_2947 3327973 - 3328392 + | hypothetical protein Pput_2948 3328392 - 3331133 + | Type IV secretory pathway VirB4 components-like protein Pput_2949 3331480 - 3331271 - | hypothetical protein Pput_2950 3332736 - 3331462 - | DNA-directed DNA polymerase Pput_2951 3333202 - 3332726 - | putative prophage repressor TERM 2595 3333628 - 3333647 + G 74 -4.8 -4.63218 | opp_overlap 3333627, overlap 3333627 3333630 GCCGTACTACATCAC GAGCGCCG ACGG CGGCCCGC TTTTCTTCGGCGCAC TERM 2596 3333785 - 3333764 - g 72 -4.3 -4.57755 | opp_overlap 3333769, overlap 3333766 ATCCACGACAGAAAA CCTCTGGTG CTTG CACCTGATG TGGCAAGGGAATGGT Pput_2952 3333257 - 3333985 + | hypothetical protein Pput_2953 3334579 - 3335610 + | hypothetical protein TERM 2597 3336076 - 3336058 - g 95 -11 -4.57569 | CGATGGCGGCAAAAA TGGCCGAC AAG GTCGACCA GGCCGGATGGGGTGC Pput_2954 3335610 - 3336965 + | hypothetical protein Pput_2955 3336962 - 3337267 + | hypothetical protein Pput_2956 3337277 - 3338815 + | hypothetical protein Pput_2957 3339648 - 3340013 + | hypothetical protein Pput_2958 3340217 - 3340633 + | hypothetical protein Pput_2959 3340719 - 3341657 + | hypothetical protein TERM 2598 3341694 - 3341678 - T 95 -10.8 -4.81685 | opp_overlap 3341678 ATCAACTAGCAAAAA GGCCCC GATTT GGGGCC TTTGTTTTTCGGCAG TERM 2599 3341678 - 3341694 + T 100 -11.5 -4.85782 | opp_overlap 3341678 ATCAACTAGCAAAAA GGCCCCG ATT TGGGGCC TTTGTTTTTCGGCAG Pput_2960 3342109 - 3341744 - | hypothetical protein Pput_2961 3342437 - 3342234 - | hypothetical protein TERM 2600 3342306 - 3342330 + g 91 -9.2 -4.56597 | opp_overlap 3342306 3342308, overlap 3342308 GCCAACCTTGAACAA GATGTCGCGC TGGCT GCGCGGCAAC TTTTTCGCACAGCGC Pput_2962 3342578 - 3344365 + | relaxase Pput_2963 3347242 - 3344453 - | ATPase involved in DNA repair-like protein TERM 2601 3346581 - 3346615 + g 85 -14.4 -3.64236 | overlap 3346573 AGGTTGTCTAGCGCG GCCTCCTTGGCC GGAGAACTAAG GGCCAAGGAGGC TTTGAGCGTTTCAAT Pput_2964 3347804 - 3347235 - | hypothetical protein Pput_2965 3350061 - 3347794 - | hypothetical protein TERM 2602 3347976 - 3347989 + g 90 -8.1 -4.82901 | TGGTGTAATCGTAAC GCCCA TCGC TGGGC TTTTTGTCCGCGACG TERM 2603 3348562 - 3348546 - G 70 -12.3 -3.20164 | CGAGAGTGAATGTAA GAGCACC ACT GGTGCTC CGACGCATAACACGT TERM 2604 3351105 - 3351122 + H 80 -11.3 -3.73224 | opp_overlap 3351105 ATCAGACACAAAAAA GCCCTGA ATAA TCAGGGC TTTAATGAGGAATAA TERM 2605 3351122 - 3351105 - H 100 -11.3 -5.43414 | opp_overlap 3351105 ATCAGACACAAAAAA GCCCTGA ATAA TCAGGGC TTTAATGAGGAATAA TERM 2606 3351329 - 3351352 + H 91 -11.1 -4.43221 | opp_overlap 3351329 ACAGCCATAAAAAAA TCCAGTCAC CGCTAA GTGACTGGA TTTTCTGGAGTATTT TERM 2607 3351352 - 3351329 - H 100 -11.8 -5.65177 | opp_overlap 3351329 ACAGCCATAAAAAAA TCCAGTCACC GCTA AGTGACTGGA TTTTCTGGAGTATTT Pput_2966 3352282 - 3352860 + | NAD(P)H dehydrogenase (quinone) TERM 2608 3352953 - 3352998 + F 85 -14.1 -3.42996 | opp_overlap 3352960, overlap 3352960 CACACCCTGACGCTT GTGCAAAGATGTCGCGCGC CTGCACGA GCACGCGACATCTTTTCGC TTCTGATGCGTCATA TERM 2609 3352960 - 3352991 + F 89 -11.6 -4.33151 | opp_overlap 3352960, overlap 3352953 TGACGCTTGTGCAAA GATGTCGCGCGC CTGCACGA GCACGCGACATC TTTTCGCTTCTGATG TERM 2610 3352991 - 3352960 - f 85 -14.5 -3.53444 | opp_overlap 3352953 3352960 TGACGCTTGTGCAAA GATGTCGCGCGCC TGCACG AGCACGCGACATC TTTTCGCTTCTGATG Pput_2967 3353027 - 3353410 + | MerR family transcriptional regulator Pput_2968 3356089 - 3353480 - | RND efflux transporter TERM 2611 3354046 - 3354082 + g 76 -8.6 -4.24342 | gap 1, overlap 3354047 CCCCGGTCCATATGT ACGGCGTACCGGCATGG GTGA CC-TGCAGGTTCGCCGG TTTGTTGATGGCCAG TERM 2612 3354047 - 3354081 + g 70 -12.1 -3.14284 | gap 1, overlap 3354046 CCCGGTCCATATGTA CGGCGTACCGGCATGG GTGA CC-TGCAGGTTCGCCG GTTTGTTGATGGCCA TERM 2613 3355713 - 3355701 - G 76 -5.5 -4.56597 | overlap 3355702 TCGTTCTGCGAAAAA CCCTC GGC GAGGA TCTGCACCAGCAAAC Pput_2969 3356959 - 3356123 - | putative sigma E regulatory protein, MucB/RseB Pput_2970 3358293 - 3357010 - | hypothetical protein Pput_2971 3359060 - 3358296 - | short-chain dehydrogenase/reductase SDR TERM 2614 3358550 - 3358577 + g 74 -9.8 -3.78953 | CATTGACGGTGATTC GCCGTGGCGC CAGGTCCA GCGCCAAGGC TTTGGTCATGCCGAT TERM 2615 3358835 - 3358821 - G 79 -11.4 -3.95787 | overlap 3358813 CAGCACATCGACAAA GCCGAC CCG GTCGGC CAGGCCCTTGAACAG Pput_2972 3359794 - 3359057 - | short-chain dehydrogenase/reductase SDR TERM 2616 3359601 - 3359585 - G 81 -4.4 -5.0133 | gap 1, opp_overlap 3359585 GACCCGTTCAAAAAA CGCCTGA ATGC TC-GGCG CTTCCTTGACATCAC Pput_2973 3362674 - 3359804 - | aminotransferase class-III TERM 2617 3361600 - 3361614 + g 71 -5.6 -4.25104 | AGTGGCTGCTGCGGA TCACCG TCG CGGCGA TTTTCATCAAGCCGC Pput_2974 3363924 - 3362713 - | Beta-ketoacyl synthase-like protein Pput_2975 3365219 - 3363921 - | Beta-ketoacyl synthase-like protein TERM 2618 3364337 - 3364372 + g 95 -13.2 -4.38712 | gap 1, overlap 3364338 CCGCCTGCATCGCCA GCACCGCGCCACGGCCC TGC GGGTCGGGG-GCGGTGA TTTTGTAGGCATCCA TERM 2619 3364338 - 3364371 + g 86 -16.7 -3.22906 | gap 1, overlap 3364337 CGCCTGCATCGCCAG CACCGCGCCACGGCCC TGC GGGTCGGGG-GCGGTG ATTTTGTAGGCATCC Pput_2976 3366298 - 3365216 - | hypothetical protein TERM 2620 3365447 - 3365488 + g 100 -10.8 -4.90266 | GGCAACCTGCGGATC CTGTGCATCGGCGACGAC TTGCCC GACATCGCTGAGGCACAG TTTTTCGTTGCTCAA Pput_2977 3367574 - 3366300 - | Beta-ketoacyl synthase-like protein Pput_2978 3368155 - 3367586 - | hypothetical protein Pput_2979 3369159 - 3368488 - | ABC transporter related TERM 2621 3369354 - 3369372 + H 70 -10.3 -3.28497 | opp_overlap 3369350, overlap 3369349 CGTGAACGAAAGCTT TGGCAGC CTTGT GCTGCCA TTGCATTTGCAATGA Pput_2980 3369474 - 3369686 + | hypothetical protein Pput_2981 3369733 - 3370920 + | acyl-CoA dehydrogenase type 2 TERM 2622 3371231 - 3371214 - g 76 -9.8 -3.96148 | TTCGGCCACGAGAAA GGCGCC TTCACC GGCGCC CTGGCGGCCAAGGCC Pput_2982 3370929 - 3372032 + | sigma-54 dependent trancsriptional regulator Pput_2983 3372163 - 3372204 + | hypothetical protein TERM 2623 3372231 - 3372210 - T 75 -12.9 -3.07344 | GCAGGGCTGAAGACA GGCCGGGGG GACG CCACCGGCC CTGCCCGCGCGATCA Pput_2984 3373569 - 3372244 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 2624 3372740 - 3372765 + g 70 -11.7 -3.16921 | overlap 3372742 GCGATGAAGCCCTTG GCCGCGGCACC GGCA GGCGCCGCGTC TTCCTCGGAGTTGCT TERM 2625 3372742 - 3372763 + g 73 -12.9 -3.14527 | overlap 3372740 GATGAAGCCCTTGGC CGCGGCACC GGCA GGCGCCGCG TCTTCCTCGGAGTTG Pput_2985 3374704 - 3373637 - | inner-membrane translocator Pput_2986 3375598 - 3374717 - | inner-membrane translocator Pput_2987 3376407 - 3375574 - | ABC transporter related Pput_2988 3377547 - 3376417 - | long-chain acyl-CoA synthetase (AMP-forming)-like protein Pput_2989 3378650 - 3377559 - | luciferase family protein Pput_2990 3379237 - 3378677 - | FMN reductase TERM 2626 3378992 - 3379012 + g 73 -12.5 -3.18582 | opp_overlap 3378985 GCGATACACCGGGCT GCCGACCAG TAG CAGGTCGGC TTGCTCGATGGCCTG TERM 2627 3379839 - 3379862 + G 72 -3.8 -4.58773 | gap 1 CGAAGCCGACTCCAA TGTGC-CGCAG GCA CTGCGCGGGCA TTTTGCTTTCGTCGA TERM 2628 3380479 - 3380516 + G 75 -11.9 -3.55444 | gap 1 GAGGCAGGCACCCTG CGCGCCAGCGAGGC-CGC GCA GCAAGCCTACCTGGCGCG TTTCGGCAATGACGA Pput_2991 3379576 - 3380814 + | acyl-CoA dehydrogenase type 2 TERM 2629 3380847 - 3380817 - T 74 -10.3 -3.56568 | opp_overlap 3380805 3380835, overlap 3380818 3380820 CAAGCAGTCCTGAAA GCATGGCCTGGGG CACAC CCCCAGGCCTCGT CACGGCACTGGCGTT TERM 2630 3380846 - 3380818 - T 76 -13.8 -2.73619 | opp_overlap 3380805 3380835, overlap 3380817 3380820 AAGCAGTCCTGAAAG CATGGCCTGGGG CACAC CCCCAGGCCTCG TCACGGCACTGGCGT TERM 2631 3380844 - 3380820 - T 75 -12.8 -2.91144 | opp_overlap 3380805 3380835, overlap 3380818 3380817 GCAGTCCTGAAAGCA TGGCCTGGGG CACAC CCCCAGGCCT CGTCACGGCACTGGC Pput_2992 3381867 - 3380881 - | inner-membrane translocator TERM 2632 3381549 - 3381517 - G 75 -12 -3.67597 | gap 1, overlap 3381514 CCCGGCATTGAACAA CCCGGCCAGGCTGCC AGCC AGCAGCCC-ACCGGG AATCGCGACATAGAG Pput_2993 3382852 - 3381869 - | inner-membrane translocator TERM 2633 3382113 - 3382062 - G 83 -7.8 -4.66318 | gap 1 ATCACCCCAAGAAAA GCGATGGCCACCACCGACAGCAGCA TCT CGCCGGAGCCGGTGGTG-CTGCCGC TGAACCAGGCCGCTG TERM 2634 3382153 - 3382136 - G 76 -6.2 -4.63218 | overlap 3382121 3382137 GGCCGCTGAACAAAA CGCGGC CAGGCT GCCGCA CAGACCGCTGATCAG Pput_2994 3384368 - 3382830 - | ABC transporter related Pput_2995 3385393 - 3384365 - | ABC-type sugar transport system periplasmic component-like protein TERM 2635 3384564 - 3384506 - G 82 -14.5 -3.34895 | gap 1, opp_overlap 3384561, overlap 3384507 3384510 CGTACGGCCAATCAA CGCAGGCTGCTGCGCCACCACTGCAGCC ACCG GGCTGCCGGGCTGGCGCAGCAGT-TCCA GCACCTCGGGCGTAC TERM 2636 3384563 - 3384507 - G 77 -15.8 -2.60723 | gap 1, opp_overlap 3384561, overlap 3384506 3384510 GTACGGCCAATCAAC GCAGGCTGCTGCGCCACCACTGCAGCC ACCG GGCTGCCGGGCTGGCGCAGCAGT-TCC AGCACCTCGGGCGTA TERM 2637 3384561 - 3384510 - G 87 -18.6 -2.60244 | overlap 3384507 3384506 CGGCCAATCAACGCA GGCTGCTGCGCCACCACTGCAGCC ACCG GGCTGCCGGGCTGGCGCAGCAGTT CCAGCACCTCGGGCG Pput_2996 3386361 - 3385390 - | periplasmic binding protein/LacI transcriptional regulator Pput_2997 3386744 - 3386358 - | hypothetical protein Pput_2998 3387986 - 3386754 - | acyl-CoA dehydrogenase type 2 Pput_2999 3389683 - 3388334 - | outer membrane porin TERM 2638 3389898 - 3389883 - R 100 -11.8 -5.67063 | opp_overlap 3389883 GTCAGGACAAAAAAA CGCGGC CTGG GCCGCG TTGAATGGAACATCA TERM 2639 3389883 - 3389898 + r 74 -11.8 -3.05816 | opp_overlap 3389883 GTCAGGACAAAAAAA CGCGGC CTGG GCCGCG TTGAATGGAACATCA Pput_3000 3390743 - 3389967 - | ABC transporter related Pput_3001 3392194 - 3390860 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pput_3002 3393654 - 3392254 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 2640 3393287 - 3393277 - G 71 -8.2 -3.9461 | GTGGGTGAAGAAGAA CGCC GTC GGCG CGCCATCCTTGCCAT Pput_3003 3394737 - 3393673 - | inner-membrane translocator Pput_3004 3395623 - 3394742 - | inner-membrane translocator Pput_3005 3396390 - 3395620 - | ABC transporter related TERM 2641 3396027 - 3396008 - G 71 -11.4 -3.53012 | gap 1, opp_overlap 3396025 GCGCGCTCGGCGAAA GCCCGG-GC CTC GCGCCGGGC ACGTGGCAGGCCCAG Pput_3006 3397358 - 3396387 - | hypothetical protein Pput_3007 3398788 - 3397379 - | hypothetical protein Pput_3008 3399125 - 3400021 + | UspA domain-containing protein TERM 2642 3400762 - 3400735 - g 72 -2.7 -4.68593 | gap 2, overlap 3400737 3400738 GCCATGATGGAAAAA CACCGCCAACAGG CAGG CCTG--AGCGGCG AACACCTGGTCGGTA Pput_3009 3400117 - 3401076 + | ribose-phosphate pyrophosphokinase Pput_3010 3401265 - 3401858 + | GCN5-related N-acetyltransferase Pput_3011 3401855 - 3402214 + | protein of unknown function DUF861, cupin_3 Pput_3012 3402282 - 3403919 + | MscS mechanosensitive ion channel TERM 2643 3403925 - 3403910 - T 71 -6.8 -4.24002 | GTCCAAACCTGAAAA CACCGC GTGA GCGATG AGGCCTCAGGTGCCG Pput_3013 3405012 - 3404125 - | MerR family transcriptional regulator TERM 2644 3405132 - 3405099 - H 85 -13.2 -3.70709 | overlap 3405097 ATCATGCAACAAACA GCGCCAAAAGCTAC TGCACG GAAGCCTTTGGCGC ACATCGCATACGAAA Pput_3014 3405166 - 3405612 + | putative PAS/PAC sensor protein TERM 2645 3405647 - 3405620 - f 86 -5 -5.24531 | overlap 3405621 AGCGCTGACAAAAAA CCTATACAAG GACGTTGA CTTGTATAGA TAAAAGCTTAGGCTT Pput_3015 3405716 - 3406138 + | hypothetical protein Pput_3016 3406135 - 3406887 + | short-chain dehydrogenase/reductase SDR Pput_3017 3406894 - 3408141 + | amine oxidase Pput_3018 3408138 - 3408947 + | hypothetical protein TERM 2646 3409820 - 3409857 + GTF 74 -9.2 -3.86346 | gap 2, overlap 3409820 AGGCGATCACCATCC G-CGACC-AGCGCTATGC CCAG GCGCAGCGCTCGGTCGAC TTTATCCAGCGGTAC Pput_3019 3408919 - 3410184 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2647 3410251 - 3410264 + GT 77 -9.5 -4.00445 | GGGTCTGCGTGCTGG GGGCC GAGC GGCCC TTGTTGTTGCTGCTG Pput_3021 3410792 - 3410610 - | hypothetical protein Pput_3020 3410184 - 3410672 + | hypothetical protein TERM 2648 3410772 - 3410784 + gT 72 -2.6 -4.7254 | opp_overlap 3410756 CACGCAAACCTTGCT GGGC AGAAG GCTC TTTTTCATAACGCCT Pput_3022 3412315 - 3410789 - | deoxyribodipyrimidine photolyase-related protein TERM 2649 3411949 - 3411939 - G 86 -8.2 -4.57353 | CGGGAGCACAGAAAA CGCG TGT CGCG AAACCACACAAGCGG Pput_3023 3412629 - 3412324 - | hypothetical protein Pput_3024 3413162 - 3412626 - | hypothetical protein Pput_3025 3413701 - 3413165 - | hypothetical protein Pput_3026 3413861 - 3414352 + | hypothetical protein Pput_3027 3414431 - 3415201 + | short-chain dehydrogenase/reductase SDR TERM 2650 3415376 - 3415395 + G 71 -5.7 -4.31587 | gap 1, overlap 3415359 3415379 TCGCTGTGCGTGTTT CAGCGGCC TTCCT GGCCG-TG TTCTTCTTTTTGAAA Pput_3028 3415297 - 3415989 + | membrane protein-like protein Pput_3029 3416082 - 3416621 + | PfpI family intracellular peptidase Pput_3030 3417235 - 3416678 - | hypothetical protein Pput_3031 3417397 - 3418254 + | short-chain dehydrogenase/reductase SDR Pput_3032 3418424 - 3418888 + | hemerythrin HHE cation binding domain-containing protein TERM 2651 3418930 - 3418896 - g 100 -20.1 -4.4078 | gap 1, opp_overlap 3418885 3418884 CCGCTTGAATCAAAA GCGCCAGGCCGGTTCA GGTG CGA-CCGGCCTGGCGC CATGGGTCAATGTTT TERM 2652 3418965 - 3419004 + G 81 -4.3 -5.0538 | gap 2, opp_overlap 3418966, overlap 3418966 CGCCGAGCACCACAA AGGCGCACTGCCGACATCC TCAA GGCT-TT-GCAGTGCGCCC TTTTTTCCACTGCGC Pput_3033 3418885 - 3419184 + | hypothetical protein Pput_3034 3419280 - 3419717 + | regulatory protein, ArsR Pput_3035 3419739 - 3421022 + | arsenical pump membrane protein Pput_3036 3421051 - 3421521 + | protein tyrosine phosphatase Pput_3037 3421535 - 3422236 + | arsenate resistance ArsH Pput_3038 3423613 - 3422249 - | integral membrane sensor signal transduction histidine kinase Pput_3039 3424272 - 3423610 - | two component transcriptional regulator Pput_3040 3424916 - 3424275 - | hypothetical protein Pput_3041 3425719 - 3424913 - | short chain dehydrogenase Pput_3042 3426386 - 3425706 - | hypothetical protein Pput_3043 3427864 - 3426395 - | AMP-dependent synthetase and ligase Pput_3044 3428534 - 3427854 - | hypothetical protein Pput_3045 3429448 - 3428651 - | exodeoxyribonuclease III Pput_3046 3429687 - 3429445 - | hypothetical protein Pput_3047 3430253 - 3429753 - | hypothetical protein TERM 2653 3430196 - 3430214 + g 82 -14.6 -3.28712 | CACCGGCGAAGCCGG TGCCCTGC ACC GCAGGGCA TTCTCCACGGCAAAG TERM 2654 3430271 - 3430229 - G 100 -17.7 -3.60098 | ATTCTCCACGGCAAA GGCGGCACTTGCCGGAGCT GTGCA AGCCCCGGCAAGCCCCGAC AAAGGGGTCAACGCA Pput_3048 3431463 - 3430279 - | amidohydrolase Pput_3049 3432766 - 3431465 - | major facilitator transporter TERM 2655 3432263 - 3432221 - G 86 -15.6 -3.60296 | gap 1, overlap 3432200 GAGGGCCAGGCCAAA GCCGGCCCCCA-CCAAGGC GGCATA GCCTTGGCTGGCGGCCTGC CAGCTGACGCTCTGG TERM 2656 3433224 - 3433243 + G 72 -4.2 -4.56133 | gap 1, overlap 3433224 GAGGGTTTTCCGACG CTC-GCGCG GAT TGCGCCGGG TTTTGGTTATTACGG Pput_3050 3433140 - 3434270 + | hypothetical protein Pput_3051 3435185 - 3434247 - | LysR family transcriptional regulator Pput_3052 3435772 - 3435272 - | redoxin domain-containing protein TERM 2657 3435697 - 3435686 - G 76 -7.2 -4.27316 | CTCGCGAATGGAAAA GGCC ATTG GGCC GATCGCGCAGGCGCC TERM 2658 3436678 - 3436690 + G 85 -6.2 -5.07652 | GCCGCCGAACAGCGT CGCC CCGTT GGCG TTTTATTTTGCCGGC Pput_3053 3436004 - 3436987 + | hypothetical protein Pput_3054 3437014 - 3438048 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Pput_3055 3438074 - 3438583 + | flavin reductase domain-containing protein TERM 2659 3439054 - 3439064 + G 80 -4.6 -4.8622 | GAGGTGGAACTGGAC CTCG CCT CGGG TTTTTCCTTCGCGCC Pput_3056 3438682 - 3439611 + | LysR family transcriptional regulator Pput_3057 3440564 - 3439677 - | LysR family transcriptional regulator Pput_3058 3440660 - 3442102 + | aldehyde dehydrogenase TERM 2660 3442323 - 3442361 + G 71 -9.4 -3.68222 | overlap 3442328 GTGCGCACGGCCAGC GACATCCGCCTGGCCCAC GAG GATGGCCGGGTGGGTATC TTCTTCGGCTTCCAG Pput_3059 3442116 - 3443102 + | peptidase M19, renal dipeptidase TERM 2661 3443350 - 3443340 - g 71 -8.2 -3.85698 | opp_overlap 3443340 CGCCTGGTCGACAAA GGCC TTT GGCC TCTATTGGCAAGTGC Pput_3060 3443158 - 3444708 + | BCCT transporter TERM 2662 3444861 - 3444889 + G 81 -13.8 -3.57792 | ATGCGGCGGATGATG CAGCAGCGCTGG CAAAT CCGGCGCAGCTG TTTCGACCTCGATGG TERM 2663 3445276 - 3445288 + G 91 -9.1 -4.43477 | ACGGTAACGGCAAGT TCGGC ATC GCCGA TTTTGGTTGCCTGCA TERM 2664 3445960 - 3445979 + G 71 -8.6 -3.84406 | gap 1 TGCGCTACGACTTCA GTGCTGCCG ATG CGG-AGCAC TTCTTCTGGTACCGC TERM 2665 3446092 - 3446059 - g 74 -2.3 -4.85782 | overlap 3446060 3446063 3446083 GGGCCGAAAAAGAAA TGCAGCTGGGTATTG CCCG CAATATCCAGCAGTG CCATGGCGCGCTGCT Pput_3061 3444735 - 3446429 + | hypothetical protein Pput_3062 3446432 - 3447127 + | hypothetical protein Pput_3063 3447155 - 3447526 + | endoribonuclease L-PSP Pput_3064 3447560 - 3447862 + | hypothetical protein Pput_3065 3447960 - 3449369 + | hypothetical protein TERM 2666 3449454 - 3449435 - g 83 -9.2 -4.37886 | GGAGCGCGCAGAAAA CCTCGCGC GCAT GCTCGAGG TCAGCTACTCGCTGT Pput_3066 3449373 - 3450323 + | hypothetical protein Pput_3067 3450320 - 3451099 + | transglutaminase domain-containing protein Pput_3068 3451173 - 3451895 + | proteasome-type protease-like protein Pput_3069 3452250 - 3453653 + | gluconate transporter TERM 2667 3453752 - 3453725 - g 72 -7.6 -4.15788 | opp_overlap 3453744 AAGCCTGGCAACAAA GCCACCCGATCA TCGC CGAGCTGGTGGC CCTGAAGCCAACCAG Pput_3070 3453688 - 3455037 + | D-serine dehydratase TERM 2668 3455100 - 3455081 - g 80 -4.8 -4.90266 | overlap 3455082 TTGATCAATGAAAAA GCCCGGCG GCGG CGCCGTGA AACTCAATGGCTCGC Pput_3071 3455073 - 3456011 + | DNA-binding transcriptional regulator DsdC TERM 2669 3456028 - 3455994 - T 95 -15.1 -3.90744 | TGGCTCGTGAAAGAA GCCTGCACTGACC TGTAGGAGC GGCCAGTGCAGGC CCAAGGACTGGGTCA Pput_3072 3457408 - 3456041 - | GntR family transcriptional regulator TERM 2670 3458621 - 3458604 - g 72 -7.7 -4.13767 | gap 1 TCCTGCAGGTGAAAA CCGCCCAG GAC CTGG-CGG AGATTGCCGTGGCCG Pput_3073 3457559 - 3458845 + | hydroxymethylglutaryl-CoA reductase, degradative TERM 2671 3459130 - 3459168 + G 74 -13.1 -3.28712 | gap 1, overlap 3459131 GCGCAACGGGCCGGA TGCCGC-GAGGTGGCGGT GTTC GCCGCCGCCTCCGAGGCG TTCTCGCGCAACAAC TERM 2672 3459131 - 3459167 + G 74 -14.4 -2.57132 | gap 1, overlap 3459130 CGCAACGGGCCGGAT GCCGC-GAGGTGGCGGT GTTC GCCGCCGCCTCCGAGGC GTTCTCGCGCAACAA Pput_3074 3458842 - 3459762 + | pyruvate carboxyltransferase TERM 2673 3459806 - 3459795 - f 71 -7.2 -4.13244 | overlap 3459796 GCACAATAACAACAA GCCC GCAA GGGC AGGAGAAAACCAATG Pput_3075 3459865 - 3460317 + | hypothetical protein Pput_3076 3460317 - 3461699 + | hypothetical protein TERM 2674 3461720 - 3461744 + F 100 -17.2 -3.65902 | CCCTCCCCTGCTCTG CCACGCAGCC AGTGC GGCTGCGTGG TTTCACTCGCCTGCA Pput_3077 3461777 - 3463027 + | outer membrane porin TERM 2675 3463137 - 3463107 - T 100 -17.6 -3.66772 | opp_overlap 3463104 CCAAAGCCTCAACAA CGCCGCGAACCCGC GTT ACAGGTTCGCAGCG TACTGCGTTCAGCGC Pput_3078 3463910 - 3463167 - | hypothetical protein TERM 2676 3464049 - 3464017 - R 85 -4.8 -5.27206 | opp_overlap 3464019, overlap 3464018 3464019 CAGAGACAATAAAAA TCCCCATGTGAGTC CCTGC GACCCACATGAGTT TTAAGGTTGATAACT TERM 2677 3464047 - 3464019 - R 71 -11.8 -2.83191 | opp_overlap 3464019, overlap 3464018 3464017 GAGACAATAAAAATC CCCATGTGAGTC CCTGC GACCCACATGAG TTTTAAGGTTGATAA TERM 2678 3464019 - 3464047 + r 74 -7.4 -4.20696 | opp_overlap 3464019 3464018 3464017 GAGACAATAAAAATC CCCATGTGAGTC CCTGC GACCCACATGAG TTTTAAGGTTGATAA Pput_3079 3466079 - 3464409 - | PAS/PAC sensor hybrid histidine kinase Pput_3080 3467226 - 3466063 - | iron-containing alcohol dehydrogenase Pput_3081 3467588 - 3467316 - | pyrroloquinoline quinone biosynthesis protein PqqD Pput_3082 3467834 - 3467640 - | coenzyme PQQ biosynthesis protein A Pput_3083 3469462 - 3467942 - | aldehyde dehydrogenase TERM 2679 3469521 - 3469559 + r 73 -11.8 -3.02856 | gap 2, opp_overlap 3469521, overlap 3469517 3469513 CACCGATGGTAAGAA GCCCCGCGTGCCGGGCGA ATGCA TCGTT-GGCA-GCGGGGC TCTCGTCTTTTGGTA Pput_3084 3471567 - 3469780 - | Pyrrolo-quinoline quinone TERM 2680 3471625 - 3471606 - R 71 -7.8 -4.07568 | opp_overlap 3471607, overlap 3471607 TTGTGCCCGGGAAAA TTTCCCGG TGTG CCGGGAAT TCTTGGTCCCGACCC TERM 2681 3471624 - 3471607 - R 70 -11.3 -3.04398 | opp_overlap 3471607, overlap 3471606 TGTGCCCGGGAAAAT TTCCCGG TGTG CCGGGAA TTCTTGGTCCCGACC TERM 2682 3471607 - 3471624 + r 80 -11.3 -3.71848 | opp_overlap 3471606 3471607 TGTGCCCGGGAAAAT TTCCCGG TGTG CCGGGAA TTCTTGGTCCCGACC TERM 2683 3471656 - 3471669 + r 71 -4.5 -4.58213 | gap 1, overlap 3471656 3471657 GATTGCCAACAATTG C-CCGC AGT GCGGAG TTTTCTAGTTCCTTG Pput_3085 3472686 - 3471763 - | beta-lactamase domain-containing protein Pput_3086 3473486 - 3472725 - | hypothetical protein Pput_3087 3474370 - 3473495 - | extracellular solute-binding protein Pput_3088 3474861 - 3474376 - | cytochrome c, class I TERM 2684 3475001 - 3475019 + H 74 -4.4 -4.70659 | opp_overlap 3475001, overlap 3475002 GCCGTGCGGGAACTA TTCCCGGC AAG GGCGGGAC TTTTTCCGTATCCCG TERM 2685 3475733 - 3475709 - g 73 -10.7 -3.54029 | GCTGATCAAGGACAA GACCAGCGGCA AGG TGCTGCTGATC CACGGCAGCTCCGGC Pput_3089 3475092 - 3476987 + | Pyrrolo-quinoline quinone TERM 2686 3476995 - 3477020 + F 100 -16.1 -3.9398 | AGCGTTGACCTGCAG CGGGGAGCGGC CTGC GCCCCTCCCCG TTTCTGCCCTTCTCC Pput_3090 3477054 - 3477713 + | pentapeptide repeat-containing protein Pput_3091 3478557 - 3477919 - | two component LuxR family transcriptional regulator TERM 2687 3478234 - 3478246 + g 71 -9.1 -3.7282 | CGCCTCGATCAGCAC CTCGG GCG CCGAG TTCTTGGTCAGGTAG TERM 2688 3478350 - 3478324 - G 91 -9.4 -4.59773 | opp_overlap 3478326 3478327 3478329, overlap 3478327 3478329 GTGCATGCTGAAAAA CAGCACCCGC AATTGCG GCAGGCGCTG GCGCAGGCGCCGGGT Pput_3092 3479831 - 3478554 - | integral membrane sensor signal transduction histidine kinase TERM 2689 3480469 - 3480518 + G 80 -14.3 -3.23216 | gap 1, opp_overlap 3480508, overlap 3480459 3480468 CGAGCCGGGCCATGC TGGCCGATGCC-TTGGCGCAGTTC CTG GTACTGCGCAAATGGCAACGGGCA TTGCTGGTGGTCGGC Pput_3093 3479982 - 3481175 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Pput_3094 3481206 - 3482195 + | YVTN beta-propeller repeat-containing protein Pput_3095 3482192 - 3482932 + | ABC transporter related Pput_3096 3482929 - 3483720 + | ABC-2 type transporter Pput_3097 3484205 - 3485014 + | peptidase C26 TERM 2690 3485038 - 3485063 + F 74 -10.4 -3.55444 | gap 1 TTCCTCTGCTTTGAT CGCGGGGCGGT GCAAG GCCGCCCC-CG TTTCCCCGGTCACCC TERM 2691 3485239 - 3485214 - f 100 -20.5 -3.53012 | GCTGCGCCTGTGAAA TCGAGCGCCGC GCGG GCGGCGCTCGA TCTGCGCCACAACAC Pput_3098 3485389 - 3486300 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 2692 3486677 - 3486689 + G 91 -9.1 -4.42653 | CCTGGTCGCTGTTCA CCCTG CTG CAGGG TTTTGTCGGTGGCCT Pput_3099 3486406 - 3487770 + | d-galactonate transporter TERM 2693 3487807 - 3487776 - f 100 -15.8 -5.08824 | gap 1, overlap 3487778 CCGTCACTGAAAAAA CACGCCCGCGCCGGG TCA CCCGGCATGGGCG-G ATGTACAAAAGCCTG TERM 2694 3487806 - 3487778 - f 100 -19.5 -4.17608 | overlap 3487776 GTCACTGAAAAAACA CGCCCGCGCCGGG TCA CCCGGCATGGGCG GATGTACAAAAGCCT TERM 2695 3487895 - 3487917 + G 72 -12 -3.28712 | opp_overlap 3487907 CTACGTCCGCCTGCA CGACGACGAC AAC GTCGTGGTCG TTGTCAACGACGGCG TERM 2696 3488924 - 3488904 - g 70 -11.8 -3.15544 | CGCTACCTGCAGCAA GGCGCCGC CGACC GCAGCGCC AACACCACACCGGGC Pput_3100 3487848 - 3489401 + | galactarate dehydratase Pput_3101 3489460 - 3491040 + | aldehyde dehydrogenase TERM 2697 3491062 - 3491080 + T 100 -9.5 -5.2853 | opp_overlap 3491062 GCACGCAACAAGAAA GCCCTGC GCACG GCGGGGC TTTTCTTTTTGACTG TERM 2698 3491080 - 3491062 - T 77 -7.3 -4.46854 | opp_overlap 3491062 GCACGCAACAAGAAA GCCCTGC GCACG GCGGGGC TTTTCTTTTTGACTG Pput_3102 3491923 - 3491174 - | GntR domain-containing protein TERM 2699 3492070 - 3492040 - H 77 -3.3 -5.14563 | gap 2 TGGCCCATGAAAAAA CGCGCAGAATCACTG GCC CA-TGGTCC-GCGCG AGTCTGTACTGTACG Pput_3103 3492123 - 3492773 + | hypothetical protein Pput_3104 3492848 - 3493177 + | hypothetical protein Pput_3105 3493339 - 3494247 + | LysR family transcriptional regulator Pput_3106 3494766 - 3494248 - | hypothetical protein TERM 2700 3495147 - 3495126 - g 90 -2.1 -5.40072 | gap 1, overlap 3495128 GGCCTGTCAAAAAAA GTGGC-GGCC ATT GGCCTGGCGC TGGGCAAGTGGCTGG Pput_3107 3494943 - 3495707 + | hypothetical protein Pput_3108 3496436 - 3495855 - | hypothetical protein TERM 2701 3497185 - 3497157 - g 88 -6.8 -5.19212 | gap 1, overlap 3497162 AGCATCAGCAAAAAA CCAAGCTTCACAC CCAA GCGTGAAG-TCGG CATGAACGTCGACAG Pput_3109 3496653 - 3498785 + | TonB-dependent siderophore receptor TERM 2702 3498834 - 3498814 - T 75 -12.5 -3.18264 | opp_overlap 3498806 3498802, overlap 3498815 CCTGTCAGTCAGCAA TTGGGCCGC TCT GCGGCCCAT CGCCAGCTAGCTTTG TERM 2703 3498833 - 3498815 - T 81 -16 -2.50816 | opp_overlap 3498806 3498802, overlap 3498814 CTGTCAGTCAGCAAT TGGGCCGC TCT GCGGCCCA TCGCCAGCTAGCTTT Pput_3110 3500162 - 3498870 - | L-sorbosone dehydrogenase Pput_3111 3500554 - 3500159 - | hypothetical protein Pput_3112 3500751 - 3501035 + | hypothetical protein TERM 2704 3502202 - 3502181 - g 75 -4.3 -4.67943 | CTGGAACACACAAAA CCCGCCCAA CCTC CCGAGCAGG AGCGCGTGCCAGCGT TERM 2705 3502827 - 3502845 + G 72 -7.4 -4.15044 | opp_overlap 3502829, overlap 3502829 ACCCGTTCAAGGACA AAGCCGAT TCG ATCGGCTC TTTGTTCGGCGCCAG TERM 2706 3502829 - 3502843 + G 70 -10 -3.6761 | opp_overlap 3502829, overlap 3502827 CCGTTCAAGGACAAA GCCGAT TCG ATCGGC TCTTTGTTCGGCGCC TERM 2707 3502843 - 3502829 - g 78 -10 -4.05446 | opp_overlap 3502829 3502827 CCGTTCAAGGACAAA GCCGAT TCG ATCGGC TCTTTGTTCGGCGCC TERM 2708 3503927 - 3503900 - g 100 -2.7 -5.88471 | GACCATGAAAAAAAA CTGCCTGCA TTCCCATCGC TGCATGCAG AAATCAAAGCTTGGC Pput_3113 3501368 - 3504358 + | hypothetical protein TERM 2709 3505110 - 3505092 - g 74 -5.3 -4.63184 | gap 1, opp_overlap 3505096 AATGCAGGGCAAAAA GAACTGGC AATT GCC-GTTC TGGGCCGTGCTGTTT Pput_3114 3504361 - 3505254 + | hypothetical protein Pput_3115 3505251 - 3505508 + | PAAR repeat-containing protein Pput_3116 3506429 - 3505659 - | beta-ketoadipate pathway transcription regulator TERM 2710 3506514 - 3506460 - H 88 -7.2 -5.16841 | opp_overlap 3506491 CCAGAGGAACAAAAA CAGCCGATTACTGCGATAACCGGA TCATGAC TGCGATTATCGCATTAAGTGGCCG CTTGACGCATTGTTG Pput_3117 3506586 - 3507395 + | shikimate dehydrogenase substrate binding subunit Pput_3118 3507400 - 3509133 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Pput_3119 3509118 - 3509438 + | NIPSNAP family protein TERM 2711 3509605 - 3509588 - g 74 -4.8 -4.56597 | gap 1, opp_overlap 3509589, overlap 3509589 GTCGTCGCGGAAAAA GCCAGCC AGCTG GGC-GGC ACCAGTGCCTGGTCG Pput_3120 3509480 - 3511168 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 2712 3512113 - 3512159 + G 72 -7.8 -4.14243 | overlap 3512114 GACGAGCCCGAGCCG ACCCGCGTGCCGTTCAGCCGTA TCC TGCGCCTGCGTGGCACCTGGGC TTTTGCAGTGGCCTA Pput_3121 3511411 - 3512736 + | major facilitator transporter TERM 2713 3512761 - 3512776 + T 100 -11.8 -5.44721 | overlap 3512770 3512772 CCACTTACCTCTACG GGGCCC TTGC GGGCCC TTTTTTTGGCCTGGT Pput_3122 3513706 - 3512891 - | xylose isomerase domain-containing protein Pput_3123 3514788 - 3513736 - | oxidoreductase domain-containing protein Pput_3124 3515703 - 3514927 - | IclR family transcriptional regulator TERM 2714 3515494 - 3515530 + g 72 -7.4 -4.1585 | gap 1, opp_overlap 3515491 3515492 GAGGTAACGAAAGCC CAG-CGCTACCAGCT TGGCCGAC AGCTGATAGCGGCTG TTTTCCCGGTTCTGG TERM 2715 3516866 - 3516884 + G 70 -10.2 -3.55563 | ACCGACCTGAAGTCG CCGGTGGC CTG GGCACCGG TTTCACAGGTGCCGT Pput_3125 3515900 - 3517612 + | putative FAD-binding dehydrogenase Pput_3126 3520627 - 3517721 - | metal dependent phosphohydrolase TERM 2716 3518025 - 3518045 + g 70 -10.4 -3.55966 | gap 1 TCCTGCCCGCCCAGG CGGC-GCGG ATAG CCGCTGCCG TTCATCTTTTCGTGG Pput_3127 3522273 - 3520780 - | aldehyde dehydrogenase TERM 2717 3521434 - 3521379 - G 81 -15.4 -3.06815 | opp_overlap 3521400 3521401 3521421, overlap 3521400 3521401 AGTTGGCCGAACACA CCTCGCCCTGGTTGAAGAAAATGCCG AAGG CGGCCTTTTCCGCAGCCAGGTCCAGG TCCTGGCAGTTGTCG TERM 2718 3521413 - 3521400 - G 72 -3.7 -4.63218 | opp_overlap 3521400 3521401, overlap 3521379 3521401 CCTGGTTGAAGAAAA TGCCG AAGG CGGCC TTTTCCGCAGCCAGG TERM 2719 3522428 - 3522370 - R 82 -13.9 -3.50447 | gap 1, opp_overlap 3522371, overlap 3522371 3522387 CCAATCGCGACACAA GGCCGCTCCCACAAGAACAGCGTTGCCC CTGC AAGCGACGCGATTGCTGTGGGAGCGG-C CTTGCGTCGCGATCG TERM 2720 3522428 - 3522371 - R 95 -19.9 -2.69947 | opp_overlap 3522371, overlap 3522370 3522387 CAATCGCGACACAAG GCCGCTCCCACAAGAACAGCGTTGCCC CTGC AAGCGACGCGATTGCTGTGGGAGCGGC CTTGCGTCGCGATCG Pput_3128 3523850 - 3522468 - | putative aminotransferase Pput_3129 3524804 - 3523893 - | LuxR family transcriptional regulator TERM 2721 3524874 - 3524827 - H 100 -20.8 -2.73681 | gap 1, opp_overlap 3524827 CAGGCACCGGAATCA CCCTTTGGGGTGAGCCGGGCA AGGGCAG TGGCCG-CTCACCCCAAAGGG TGATTCCGGGTACCT TERM 2722 3524827 - 3524874 + H 100 -20.8 -2.72463 | gap 1, opp_overlap 3524827 CAGGCACCGGAATCA CCCTTTGGGGTGAGCCGGGCA AGGGCAG TGGCCG-CTCACCCCAAAGGG TGATTCCGGGTACCT TERM 2723 3526054 - 3526043 - g 72 -2.2 -4.72272 | gap 1, opp_overlap 3526052 GCTGGTGACGAAAAA GCGCG TGC CG-GC CACTGCCATCCTGGT Pput_3130 3525018 - 3526400 + | amino acid permease-associated region TERM 2724 3526475 - 3526445 - f 70 -10.5 -3.31144 | opp_overlap 3526470, overlap 3526446 CGGGCATCGCGAGAA CCCGGGTGATAAC TGTTC GTTATCACCCGAT CCGGATTAATCATTA TERM 2725 3526474 - 3526446 - f 78 -14 -2.58544 | opp_overlap 3526470, overlap 3526445 GGGCATCGCGAGAAC CCGGGTGATAAC TGTTC GTTATCACCCGA TCCGGATTAATCATT Pput_3131 3526555 - 3528135 + | aldehyde dehydrogenase TERM 2726 3528152 - 3528199 + F 100 -31.4 -2.7317 | overlap 3528193 CTTTCATAGCTGCAA CCCGTGCCGGCCTCTTCGCGGC TCCA GCCGCCAAGAGGCCGGCACGGA TACTTCGAGCTGTAT TERM 2727 3529428 - 3529458 + G 78 -12.4 -3.76492 | opp_overlap 3529428 TCAACCGCAATGATA TCGGCGCCCTGGCC CCG GGCATGGTCGCCGA TTTCGTCGCCTTCGA Pput_3132 3528272 - 3529669 + | hydroxydechloroatrazine ethylaminohydrolase TERM 2728 3529738 - 3529707 - T 70 -10.8 -3.33696 | gap 1, opp_overlap 3529713, overlap 3529708 GCCGGGTTGAATGAA GGTCATGCGCAGCCC TTT GGGCTGCGC-TGTCA TGTAGAGAACAAAGG TERM 2729 3529737 - 3529708 - T 78 -14.3 -2.60075 | gap 1, opp_overlap 3529713, overlap 3529707 CCGGGTTGAATGAAG GTCATGCGCAGCCC TTT GGGCTGCGC-TGTC ATGTAGAGAACAAAG TERM 2730 3529713 - 3529733 + T 88 -18.3 -2.85351 | opp_overlap 3529708 3529707 TTGAATGAAGGTCAT GCGCAGCCC TTT GGGCTGCGC TGTCATGTAGAGAAC Pput_3133 3530350 - 3529859 - | GCN5-related N-acetyltransferase Pput_3134 3530513 - 3531103 + | heme oxygenase Pput_3135 3531111 - 3531677 + | hypothetical protein Pput_3136 3531862 - 3531707 - | hypothetical protein TERM 2731 3531794 - 3531812 + g 72 -4.5 -4.62069 | overlap 3531785 3531795 CTTGGGCTTGCGTGG CGCCAGT TTGGC ACTGGCC TTTTTGGCATGCGCC TERM 2732 3532198 - 3532210 + G 81 -10.5 -4.1196 | TGTTCAGCGGGACGA CCGGC TTC GCCGG TTTTCGCGATGCGTT Pput_3137 3532074 - 3533828 + | hypothetical protein Pput_3138 3534369 - 3533839 - | hypothetical protein Pput_3139 3536021 - 3534381 - | hypothetical protein Pput_3140 3536650 - 3536021 - | paraquat-inducible protein A Pput_3141 3537243 - 3536647 - | paraquat-inducible protein A Pput_3142 3537394 - 3537867 + | hypothetical protein TERM 2733 3537874 - 3537911 + T 70 -11.9 -2.53213 | opp_overlap 3537872 AGCCCCTGAGCAATG CCACGCCATGCGCCTCC TGCC GGGGTAGCATGGCGTGC TCAGTTCAGAACTTC Pput_3143 3538870 - 3537917 - | LysR family transcriptional regulator Pput_3144 3539100 - 3539486 + | glyoxalase/bleomycin resistance protein/dioxygenase Pput_3145 3539528 - 3540097 + | hypothetical protein Pput_3146 3541953 - 3540274 - | general substrate transporter TERM 2734 3541481 - 3541471 - G 86 -8.2 -4.57569 | CCAGGCGGTGAAAAA GCCG CGT CGGC CCTTGGGCGCATGCT Pput_3147 3542634 - 3542215 - | glyoxalase/bleomycin resistance protein/dioxygenase Pput_3148 3543636 - 3542710 - | alpha/beta hydrolase fold TERM 2735 3544182 - 3544204 + G 74 -9.8 -3.72695 | GCCAACATCTGGGTT GGCGTTCCCG ATG TGGAAACGCC TTTGGTCCCGGACGT Pput_3149 3543666 - 3548708 + | leucine-rich repeat-containing protein Pput_3150 3551220 - 3548716 - | UvrD/REP helicase TERM 2736 3550569 - 3550618 + g 76 -13.6 -3.17688 | gap 2, opp_overlap 3550605, overlap 3550566 CCAGCTCGCGGGCCT GCGCAGGCTGCAGGTTGATCTGCC ACAG GGC-GAACA-CCTGCAGCAGGCGC TTGATGAAGTCCTTG Pput_3151 3551406 - 3552104 + | pirin domain-containing protein TERM 2737 3552158 - 3552183 + F 79 -8.3 -4.36914 | gap 1, opp_overlap 3552159, overlap 3552159 3552159 GGCTCCCATGGAACA ACC-GCTAACCC GTA GGGTTAGCAGGG TTTTATGGGGGCACG TERM 2738 3552181 - 3552159 - f 86 -14.2 -3.67597 | opp_overlap 3552159 3552159 3552158 GCTCCCATGGAACAA CCGCTAACCC GTA GGGTTAGCAG GGTTTTATGGGGGCA TERM 2739 3552159 - 3552182 + F 77 -11.8 -3.21934 | gap 1, opp_overlap 3552159, overlap 3552158 3552159 GCTCCCATGGAACAA CC-GCTAACCC GTA GGGTTAGCAGG GTTTTATGGGGGCAC TERM 2740 3552159 - 3552181 + F 70 -12 -2.52946 | opp_overlap 3552159, overlap 3552159 3552158 GCTCCCATGGAACAA CCGCTAACCC GTA GGGTTAGCAG GGTTTTATGGGGGCA TERM 2741 3552479 - 3552494 + G 70 -7.5 -4.05446 | opp_overlap 3552478 ACTGGAGCAGATCAG CGCGG GTATTG CCGCG TTTCTGGTTAAAAAC TERM 2742 3552522 - 3552509 - g 76 -5.9 -4.56597 | overlap 3552510 GTTTCTGGTTAAAAA CGCCG CCAG CGGCA CCGATCGTGTGGTCA Pput_3152 3552321 - 3555092 + | amino acid adenylation domain-containing protein Pput_3153 3555605 - 3555120 - | hypothetical protein TERM 2743 3555403 - 3555424 + g 74 -10.1 -3.78775 | opp_overlap 3555402 3555404, overlap 3555404 CCATGCTTGACGAAC ACCTGGTCG GCCT CGACCAGGC TTTCGTCCTCGGCCG TERM 2744 3555404 - 3555423 + g 74 -13.6 -2.87051 | opp_overlap 3555404 3555402, overlap 3555403 CATGCTTGACGAACA CCTGGTCG GCCT CGACCAGG CTTTCGTCCTCGGCC TERM 2745 3555423 - 3555404 - G 76 -13.6 -3.1372 | opp_overlap 3555403 3555404, overlap 3555402 CATGCTTGACGAACA CCTGGTCG GCCT CGACCAGG CTTTCGTCCTCGGCC TERM 2746 3555711 - 3555731 + r 72 -12.5 -2.53271 | opp_overlap 3555712, overlap 3555710 3555708 TCTTTGCGCGGAAAA AGGGGCTGC TGC GCAGCCCCC CTGTTGTACCCGTAA TERM 2747 3555730 - 3555712 - R 100 -16 -4.56597 | opp_overlap 3555711 3555710 3555708 CTTTGCGCGGAAAAA GGGGCTGC TGC GCAGCCCC CCTGTTGTACCCGTA Pput_3154 3566625 - 3555766 - | heme peroxidase TERM 2748 3564249 - 3564263 + g 81 -7.1 -4.77165 | opp_overlap 3564259 AGCTGGAACCGAGCA TGCCG CCAAA CGGCA TTTTCTTCTCGGCCA TERM 2749 3566801 - 3566778 - H 75 -8.8 -4.07687 | AGGGGCCCTGTAAAA CGTGCGCAAC AGGT GTAACGCACG TGCATCGATCCCAGC Pput_3155 3567138 - 3568874 + | type I secretion system ATPase Pput_3156 3568881 - 3570221 + | HlyD family type I secretion membrane fusion protein TERM 2750 3570384 - 3570352 - g 80 -6.1 -4.72272 | overlap 3570355 3570369 GCCGTGCATGAAAAA CAAGCCGGTGGCG AAAACCG CGCCATCGGCGAG GCCGGCCTGCTGCCG TERM 2751 3570381 - 3570355 - g 95 -10.8 -4.47707 | overlap 3570352 3570369 GTGCATGAAAAACAA GCCGGTGGCG AAAACCG CGCCATCGGC GAGGCCGGCCTGCTG TERM 2752 3570385 - 3570369 - g 76 -9.3 -4.07687 | overlap 3570355 3570352 AGCCGGTGGCGAAAA CCGCGCC ATC GGCGAGG CCGGCCTGCTGCCGC Pput_3157 3570223 - 3571551 + | TolC family type I secretion outer membrane protein Pput_3158 3571767 - 3572630 + | diguanylate cyclase with PAS/PAC sensor Pput_3159 3572648 - 3574000 + | chromate transporter TERM 2753 3574650 - 3574621 - g 80 -14.3 -3.14931 | gap 1, opp_overlap 3574621 3574618 3574615 TTCAGTCTGCAGGAA CCGCAGCACC-CGC AGA GCGCGGTGCCGCAG TCGTTGTTGATGGTG Pput_3160 3574012 - 3574680 + | methyltransferase type 12 Pput_3161 3576656 - 3574749 - | 4-hydroxyphenylpyruvate dioxygenase TERM 2754 3574885 - 3574873 - G 74 -5.5 -4.45068 | ATCTCGAAGAAGAAA CGCTC CTC GAACG GCTCGGTATACACGT TERM 2755 3575808 - 3575829 + g 76 -7.3 -4.30576 | gap 1, opp_overlap 3575808 CGGCGGGGAGAACAG CACGCCAGGT TCG ATC-GGCGTG TTTTCCTGCTCCAGG TERM 2756 3576557 - 3576606 + g 78 -10.6 -4.07885 | opp_overlap 3576566 3576584, overlap 3576558 AATAGAGCAGATCGT TCTCGAAGATCTCGACGCCGTC AAAACC GGCGGCGGCGATGGCTTCGAGC TTTTCCGGCAGAGTG TERM 2757 3576558 - 3576605 + g 75 -14.1 -3.04517 | opp_overlap 3576566 3576584, overlap 3576557 ATAGAGCAGATCGTT CTCGAAGATCTCGACGCCGTC AAAACC GGCGGCGGCGATGGCTTCGAG CTTTTCCGGCAGAGT TERM 2758 3578287 - 3578268 - g 72 -7.8 -4.19704 | overlap 3578285 CAAGCCGATGGAAAA GGCTGCCT ATGA AGCCAGCC GTAAAGGTAGCTTTC Pput_3162 3576946 - 3578319 + | major facilitator transporter Pput_3163 3579869 - 3578433 - | aromatic-L-amino-acid decarboxylase Pput_3164 3580938 - 3579994 - | LysR family transcriptional regulator TERM 2759 3580848 - 3580867 + g 76 -5.6 -4.62069 | overlap 3580849 GGCTGACGCCCAGGC GCTCGGCC GCGT GGCTGAGG TTTTTAAGCTGCAAC TERM 2760 3581068 - 3581054 - R 75 -12.8 -3.01712 | opp_overlap 3581048 GCTTGCCCGCGAACA GGCCGC AAC GCGGCC CCGACGATTACTCGG Pput_3165 3581789 - 3581076 - | hypothetical protein Pput_3166 3583278 - 3581887 - | FAD dependent oxidoreductase Pput_3167 3584609 - 3583293 - | major facilitator transporter Pput_3168 3584853 - 3585749 + | LysR family transcriptional regulator Pput_3169 3585774 - 3586145 + | hypothetical protein Pput_3170 3586911 - 3586135 - | trans-aconitate 2-methyltransferase TERM 2761 3587195 - 3587155 - R 100 -19.7 -3.63515 | opp_overlap 3587162, overlap 3587156 3587162 GCCCAGGCCCAACAA CGCGAAACGGCCGGGTCCC CAA GGGAGCCGGCCGTTTCCAG ACGCGAGTGACGCTT TERM 2762 3587193 - 3587156 - R 100 -20.7 -2.77895 | gap 1, opp_overlap 3587162, overlap 3587155 3587162 CCCAGGCCCAACAAC GCGAAACGGCCGGGTCCC CAA GGGAGCCGGCCGTTTC-C AGACGCGAGTGACGC TERM 2763 3587162 - 3587188 + r 100 -19.4 -3.53091 | opp_overlap 3587156 3587155 3587162 CCCAACAACGCGAAA CGGCCGGGTCCC CAA GGGAGCCGGCCG TTTCCAGACGCGAGT TERM 2764 3587188 - 3587162 - R 100 -19.4 -3.72051 | opp_overlap 3587162, overlap 3587156 3587155 CCCAACAACGCGAAA CGGCCGGGTCCC CAA GGGAGCCGGCCG TTTCCAGACGCGAGT Pput_3171 3588621 - 3587209 - | amino acid permease-associated region Pput_3172 3588947 - 3590371 + | GntR family transcriptional regulator Pput_3174 3591129 - 3591419 + | hypothetical protein Pput_3176 3591755 - 3592318 + | hypothetical protein Pput_3177 3593106 - 3592330 - | short-chain dehydrogenase/reductase SDR TERM 2765 3592819 - 3592840 + g 73 -11.5 -3.61715 | opp_overlap 3592816 3592811 CCAATCACGGAAGTC CCCCGGTGG CGGG CCACCGGCG TTGTTGACCAGAATG Pput_3178 3594200 - 3593274 - | LysR family transcriptional regulator Pput_3179 3595034 - 3594327 - | hypothetical protein Pput_3180 3595431 - 3595129 - | hypothetical protein Pput_3181 3595630 - 3596253 + | glutathione S-transferase domain-containing protein Pput_3182 3597482 - 3596307 - | major facilitator transporter Pput_3183 3597577 - 3598476 + | LysR family transcriptional regulator Pput_3184 3599149 - 3598526 - | TetR family transcriptional regulator Pput_3185 3599279 - 3600961 + | amidohydrolase 3 Pput_3186 3600976 - 3602133 + | major facilitator transporter TERM 2766 3602810 - 3602825 + G 100 -10.4 -5.00616 | TGGCCACGCTGCTGC CGCCTC GCGT GAGGCG TTTTTTGCCGAGGCG Pput_3187 3602244 - 3603221 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_3188 3603671 - 3603246 - | hypothetical protein Pput_3189 3603874 - 3604869 + | 5'-nucleotidase Pput_3190 3605240 - 3604983 - | hypothetical protein TERM 2767 3605028 - 3605017 - G 71 -5.8 -4.26076 | TGATGGCCACCAAAA CCAC CGCC GTGG CCCCCCCCACCATGA Pput_3191 3605365 - 3606642 + | O-acetylhomoserine aminocarboxypropyltransferase Pput_3192 3606708 - 3607472 + | hypothetical protein Pput_3193 3608027 - 3607554 - | hypothetical protein TERM 2768 3607615 - 3607586 - G 91 -15.1 -3.92602 | TCAACACCTCATAAA TGATCCCGGTCGC CACG GCGACCAGAATCA GGTCTGCGCCCGCTT Pput_3194 3608174 - 3609337 + | ATPase-like protein Pput_3195 3610106 - 3609366 - | metal dependent phosphohydrolase TERM 2769 3609624 - 3609598 - G 72 -3.7 -4.67353 | gap 1, overlap 3609610 CCAGCGACGTAAAAA CACCGG-GCAAT ACCC ACCGCGCCGATG GCGTCAAGCCGGTCA Pput_3196 3610276 - 3612687 + | TonB-dependent siderophore receptor Pput_3197 3613635 - 3612727 - | glutaminase Pput_3198 3613839 - 3613714 - | hypothetical protein Pput_3199 3614027 - 3615376 + | major facilitator transporter TERM 2770 3615692 - 3615745 + G 78 -6.8 -4.56597 | overlap 3615708 GTGGGCGGCCACGCA GCGC-TGTCGCGGCACATCGGCCA GAGCCTGA TGGCCGATGAGTT-CGACATGAGC TTTTTCCGCGACAAG Pput_3200 3615398 - 3616660 + | protocatechuate 4,5-dioxygenase TERM 2771 3616758 - 3616729 - f 81 -14.3 -3.05384 | gap 1, opp_overlap 3616745 3616749 CGCTCCCTGATTCAA CCTGCCCAGCGCCG ATG CGCCGCT-GGCAGG CAGCGCTTTGCCCAT Pput_3201 3616792 - 3618039 + | outer membrane porin Pput_3202 3619248 - 3618055 - | LysR family transcriptional regulator Pput_3203 3619408 - 3620142 + | LmbE family protein TERM 2772 3620766 - 3620745 - g 71 -8.6 -3.85389 | overlap 3620739 CTGGAAGAACGCAAA CGCCTGCG CCTGGC CGCCGGCG AGCTTGGCCTGGACA Pput_3204 3620139 - 3620855 + | hypothetical protein TERM 2773 3621079 - 3621041 - g 88 -14.7 -3.78775 | gap 1 TCGCTCACCAGCAAA GTCGCCATCATCCGCGCT TCGC AGCGCG-ATGACGCCGAC GTGGACTACCTGTTC Pput_3205 3620858 - 3621943 + | hypothetical protein Pput_3206 3622425 - 3621967 - | hypothetical protein TERM 2774 3622372 - 3622357 - G 79 -8.2 -4.29106 | CGTCACACCAATAAA CGGCAG CAGA CCGCCG TAACCCAGGACAGCG Pput_3207 3623056 - 3622496 - | GTP cyclohydrolase I Pput_3208 3623454 - 3623041 - | putative thiol-disulphide oxidoreductase DCC Pput_3209 3624379 - 3623603 - | hypothetical protein Pput_3210 3624436 - 3624714 + | hypothetical protein TERM 2775 3624723 - 3624763 + F 79 -8.4 -4.41616 | gap 1, opp_overlap 3624716 GCTTTAAAGGGCACG GGGCCCCGCTAACGTCA CTGGATGA TGACGTTA-TGGGGACC TTTCTTTCACCCCAT TERM 2776 3624829 - 3624844 + F 75 -6 -4.64861 | ACGTGATAGTACTTA GCCCGC CTCG GCAGGC TTTCTTTTGCCCGCA TERM 2777 3624996 - 3625021 + F 71 -7.6 -4.07885 | gap 1, overlap 3624996 3625016 3625019 CAGCCCTAGTCTCGG CC-TGTCGCCA CCCAT TGGCGGCACGG TTTTGACAGACCGTG Pput_3211 3625200 - 3625442 + | hypothetical protein Pput_3212 3625594 - 3625857 + | hypothetical protein Pput_3213 3626472 - 3625918 - | GCN5-related N-acetyltransferase Pput_3214 3627377 - 3626571 - | HNH endonuclease TERM 2778 3627625 - 3627593 - R 100 -9.2 -5.41746 | gap 1, opp_overlap 3627605, overlap 3627595 AATCGTTTAAAAAAA GA-CGAAACGGCACG GCTA CAGGCCGTTTCGCTC AAACCTGTCCCCAGG TERM 2779 3627622 - 3627595 - R 90 -12 -4.34482 | opp_overlap 3627605, overlap 3627593 TCGTTTAAAAAAAGA CGAAACGGCACG GCTA CAGGCCGTTTCG CTCAAACCTGTCCCC Pput_3215 3628492 - 3627776 - | short-chain dehydrogenase/reductase SDR Pput_3216 3629023 - 3628538 - | hypothetical protein TERM 2780 3630250 - 3630262 + G 80 -6.2 -4.72272 | opp_overlap 3630249 CTTGCGTCAGTCAAT CGGC AGCAC GCCG TTTTTGATGCCCGGC TERM 2781 3630313 - 3630335 + G 70 -12 -3.21747 | overlap 3630314 GAGCATTGGATGCAC CCTGCTCACC CAG GGTGAGCAGA TTGATGATGCAATAA TERM 2782 3630314 - 3630334 + G 76 -15.5 -2.52834 | overlap 3630313 AGCATTGGATGCACC CTGCTCACC CAG GGTGAGCAG ATTGATGATGCAATA Pput_3217 3629390 - 3630427 + | diguanylate cyclase TERM 2783 3630792 - 3630770 - T 83 -7.7 -4.81551 | CACGCACATGAAAAA GGCCATCCC TTTCG GAAATGGCC TAAGTCATTGAAATA TERM 2784 3630994 - 3630978 - T 84 -3 -5.40072 | overlap 3630957 TTTTTCTCAAAAAAA TTTCCG CTCAT CAGAAA CCCGGTTTACTTCTT Pput_3218 3631357 - 3631001 - | MerR family transcriptional regulator TERM 2785 3631282 - 3631309 + g 81 -13.6 -3.56643 | gap 1, opp_overlap 3631281 3631280 TTACGGCACACAACT CGCTCACTTCACC AAT GGTGAAGT-AGCG TTTGCCCGGTATGGG ihfA 3631640 - 3631338 - | integration host factor subunit alpha pheT 3634026 - 3631645 - | phenylalanyl-tRNA synthetase subunit beta TERM 2786 3631751 - 3631769 + g 77 -2.2 -4.9725 | GATGGATGCTGCCAG GTCAAGCC GAC GGCAAGGC TTTTTCTATCAGGAT TERM 2787 3633612 - 3633637 + g 75 -4.5 -4.69053 | CGCCAACCGGAGCGT CGGCAGCCAGT TCCA GCAGGCCGTCG TTTTCTTCGCTGATC pheS 3635074 - 3634058 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2788 3635127 - 3635097 - R 100 -17 -4.39166 | opp_overlap 3635107 CTCCAGATACGAAAA TAGGGGAAGAGCTT TGA AGGCTCTTCCCCTA TCGATGACGTTCAAT rplT 3635540 - 3635184 - | 50S ribosomal protein L20 TERM 2789 3635218 - 3635231 + g 77 -3.7 -4.88407 | opp_overlap 3635217 3635216 GCTTTCTCGACAATC GCAGC AAAC GCCGC TTTTTCGTTCACTGC rpmI 3635762 - 3635568 - | 50S ribosomal protein L35 TERM 2790 3635818 - 3635829 + r 75 -2.2 -5.06414 | overlap 3635806 GGCCTGCCGTGCCCG GGAG ATTA CTTC TTTTTCTTGGGGGCG infC 3636374 - 3635823 - | translation initiation factor IF-3 thrS 3638296 - 3636374 - | threonyl-tRNA synthetase TERM 2791 3637564 - 3637576 + g 73 -3.3 -4.70626 | overlap 3637565 GCTGCTTGCCGATCT TGCGG TGG TCGCG TTTTTCGGCTTCTTC TERM 2792 3637864 - 3637884 + g 74 -5.4 -4.63486 | overlap 3637875 CCGTGAACACATCGA TGACTTCG GCGCG CGGGGTCA TTTTCTTGACCACGT TERM 2793 3637892 - 3637906 + g 72 -4.2 -4.66609 | overlap 3637875 CGGGGTCATTTTCTT GACCAC GTC GTAGTC TTTTTCGATCAGCTC TERM 2794 3638812 - 3638797 - g 77 -2.4 -5.03314 | GCCACCGCGAAAAAA CACTGC GACT GCGGCG CGCAAGCCATCAAAA Pput_3226 3638635 - 3638940 + | hypothetical protein Pput_3227 3639103 - 3639315 + | cold-shock DNA-binding domain-containing protein TERM 2795 3639352 - 3639336 - T 100 -10.8 -5.42862 | opp_overlap 3639336 ATAGCTGTAAAAAAA CCCGCC CTTGT GGCGGG TTTTTTTATGGGTGA TERM 2796 3639336 - 3639352 + T 100 -10.8 -5.64274 | opp_overlap 3639336 ATAGCTGTAAAAAAA CCCGCC CTTGT GGCGGG TTTTTTTATGGGTGA Pput_3228 3639836 - 3639516 - | hypothetical protein Pput_3229 3640111 - 3640323 + | hypothetical protein Pput_3230 3641296 - 3640295 - | inosine/uridine-preferring nucleoside hydrolase Pput_3231 3641759 - 3641361 - | D-ribose pyranase Pput_3232 3642664 - 3641756 - | ribokinase TERM 2797 3642703 - 3642717 + r 72 -12.8 -2.52464 | opp_overlap 3642700 ATTCATTGAACAGGT CCGGGC GCG GCCCGG TGGATTCACGCAAGA Pput_3233 3643702 - 3642680 - | alanine racemase Pput_3234 3644702 - 3643707 - | monosaccharide-transporting ATPase Pput_3235 3646252 - 3644699 - | ABC transporter related Pput_3236 3647232 - 3646273 - | monosaccharide-transporting ATPase Pput_3237 3647600 - 3648688 + | L-asparaginase, type II TERM 2798 3648700 - 3648725 + T 83 -11.9 -3.73068 | CTGATCAACCCCCCA TGGCCGGTG CCCCACAT CACCGGCCA TTCTTCCGTTCCAGA TERM 2799 3648771 - 3648784 + T 72 -5.9 -4.40601 | GCCACTCAACTGGGG CTCGC ATCA GCGGG TTTCTTCTCTGGCTT Pput_3238 3650686 - 3648812 - | putative PAS/PAC sensor protein TERM 2800 3650806 - 3650794 - H 81 -2.7 -5.20735 | TCAATAAAAAATAAA CTAAT AAA ATCAG ATAGTTAAAAAATAA Pput_3239 3650887 - 3651327 + | cyanate hydratase TERM 2801 3651960 - 3651993 + G 82 -3.1 -5.1356 | overlap 3651963 3651963 3651965 CACCTCTGTGAGCGG CAAGGTGATCGCCAT GTGG ATGCCGATCATGCTG TTTTTCTTCATGGGC Pput_3240 3651391 - 3652215 + | formate/nitrite transporter TERM 2802 3652254 - 3652228 - f 71 -7.2 -4.11304 | opp_overlap 3652228 3652228 TGAAGCGATAAAGAA GGCAGGCAGC CTCAGTC GCCGCCTGTC TCACTTCATACCCAG Pput_3241 3652406 - 3652678 + | hypothetical protein TERM 2803 3653120 - 3653102 - g 76 -10.2 -3.84406 | overlap 3653103 TGGCTACCAGAACAA CGCGGCCA GTA TGGCCGCT GCCTGACCCAGGTCG TERM 2804 3653119 - 3653103 - g 74 -13.7 -2.90322 | overlap 3653102 GGCTACCAGAACAAC GCGGCCA GTA TGGCCGC TGCCTGACCCAGGTC Pput_3242 3652685 - 3653377 + | deoxyribonuclease I Pput_3243 3653827 - 3653381 - | hypothetical protein Pput_3244 3654554 - 3653985 - | sporulation domain-containing protein TERM 2805 3654675 - 3654654 - H 100 -14.5 -4.81249 | opp_overlap 3654654 GCGCAAATGCAAAAA GGGCGATCA TTTC TGATCGCCC TTTTTCGATTTGGTA TERM 2806 3654654 - 3654675 + H 100 -14.5 -4.82855 | opp_overlap 3654654 GCGCAAATGCAAAAA GGGCGATCA TTTC TGATCGCCC TTTTTCGATTTGGTA TERM 2807 3654844 - 3654831 - H 86 -5.3 -5.2197 | GAGAAAAATCAAAAA CTTTC GAAT GAAAG CGCTTTGCGTCCATG TERM 2808 3654924 - 3654901 - H 100 -14.6 -5.32944 | opp_overlap 3654901 TGGACAATGAAAAAA GGGGTGACCC TTTC GGATCACCCC TTTTTCGATTTGGTA TERM 2809 3654901 - 3654924 + H 100 -12.4 -4.82855 | opp_overlap 3654901 TGGACAATGAAAAAA GGGGTGACCC TTTC GGATCACCCC TTTTTCGATTTGGTA Pput_3245 3655215 - 3656498 + | FAD dependent oxidoreductase Pput_3246 3657344 - 3656610 - | hypothetical protein TERM 2810 3656890 - 3656861 - G 85 -9.9 -4.32049 | overlap 3656851 CATAACCGATCAAAA CGGCATAACGGGG CTCG CCCCACCAGGCCG AACCGTCCTCGTAAC Pput_3247 3657511 - 3657684 + | hypothetical protein TERM 2811 3657788 - 3657804 + T 91 -9.3 -5.08824 | GGCTTGTCCGCGAGA GGGACGC GAA GCGCCCC TTTTTTACATCAACC Pput_3248 3658566 - 3657814 - | integral membrane protein TerC Pput_3249 3658867 - 3658595 - | hypothetical protein Pput_3250 3658967 - 3659860 + | LysR family transcriptional regulator Pput_3251 3659958 - 3661169 + | serine/threonine transporter SstT TERM 2812 3661800 - 3661778 - g 73 -12.8 -3.11732 | CGGAAATCGAGGCAA TTCTCGCTGC ACG GCAGCAAGAA GGCGGCGGGCGCAGT Pput_3252 3661258 - 3661902 + | hypothetical protein Pput_3253 3662095 - 3661907 - | hypothetical protein Pput_3254 3662391 - 3662185 - | hypothetical protein Pput_3255 3663975 - 3662413 - | alkyl hydroperoxide reductase subunit F TERM 2813 3664035 - 3664012 - R 100 -17.4 -4.9725 | opp_overlap 3664012 ACTCGGATACAAAAA CGCCCAGGCG AGGT CGCCCGGGCG TTTGACGGGGCGGTA TERM 2814 3664012 - 3664035 + r 88 -15.2 -3.53224 | opp_overlap 3664012 ACTCGGATACAAAAA CGCCCAGGCG AGGT CGCCCGGGCG TTTGACGGGGCGGTA Pput_3256 3664663 - 3664100 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2815 3665216 - 3665232 + G 84 -4.3 -5.14563 | GGCGCGCAGTCGGCA CTGGAGT TCT ACACCGG TTTTTTGGTCGAGCA Pput_3257 3664985 - 3666049 + | integral membrane protein TerC Pput_3258 3667374 - 3666145 - | acyl-CoA dehydrogenase domain-containing protein TERM 2816 3667009 - 3667023 + g 76 -5.6 -4.60041 | overlap 3667011 GCCACGCAGCAGCGG CTCCAG CCA CTGGCG TTTTTGCGCCTCGCT Pput_3259 3667515 - 3668438 + | LysR family transcriptional regulator Pput_3260 3668590 - 3669786 + | aminotransferase, class V Pput_3261 3670392 - 3669955 - | RES domain-containing protein Pput_3262 3670964 - 3670389 - | hypothetical protein TERM 2817 3670986 - 3670941 - G 82 -14.7 -3.25823 | gap 1, overlap 3670979 GCTTTGCCAGATTAA CCGCCAGCGTTGCCAGGGCCGC ACA GCGGCCCCGGAAAC-CTCACAG GAAGGTGAACACTTG Pput_3263 3671634 - 3670981 - | dihydropteridine reductase Pput_3264 3671732 - 3672661 + | LysR family transcriptional regulator TERM 2818 3672754 - 3672737 - g 74 -9.1 -3.94188 | ATCGACTTCAAACAA GACGCCG ACAC CGGCATC GAGTCGGTCCGCGCG Pput_3265 3672710 - 3673540 + | AraC family transcriptional regulator Pput_3266 3673592 - 3674176 + | lysine exporter protein LysE/YggA TERM 2819 3674272 - 3674241 - T 73 -8.6 -4.08064 | overlap 3674242 AACGCCTCGCGAAAA CGCCGGGTACTGGC AACG GCCAGTACCAGCCC GACCACTGCCACGCT Pput_3267 3675457 - 3674216 - | sugar efflux transporter TERM 2820 3674639 - 3674623 - G 74 -2.1 -4.9445 | overlap 3674624 3674625 ACAACGAACCAAAAA CCCCGGC ACC GCCGAAC AACAGCAGCAACAGT TERM 2821 3675183 - 3675139 - G 72 -12.2 -3.29325 | gap 1, opp_overlap 3675147 3675152, overlap 3675137 3675148 3675162 GGCTGACAATGAACA CCAGGAACA-CGAACAGCAGC AGAC GCCGCCGTTCGATGTTGCGGG TCAGCAACATCATGG TERM 2822 3675173 - 3675148 - G 73 -13.3 -3.20307 | opp_overlap 3675147 3675152, overlap 3675139 3675137 3675162 TGAACACCAGGAACA CGAACAGCAGC AGAC GCCGCCGTTCG ATGTTGCGGGTCAGC Pput_3268 3675621 - 3676937 + | hypothetical protein Pput_3269 3678100 - 3677048 - | alcohol dehydrogenase Pput_3270 3678282 - 3679187 + | AraC-like transcriptional regulator Pput_3271 3679796 - 3679251 - | 2'-5' RNA ligase Pput_3272 3679955 - 3680854 + | aspartyl/asparaginyl beta-hydroxylase TERM 2823 3680863 - 3680889 + F 78 -12.3 -3.53091 | opp_overlap 3680867 CATCTGAAGGCTCAA CGCAGGCCACT GTACG AGTGACCTGCG TTTACCCACCAAAGT Pput_3273 3680973 - 3681317 + | alkylhydroperoxidase TERM 2824 3681354 - 3681325 - f 95 -14.2 -3.96327 | ACGGTTGAGCACAAA CGGCGTCGCCGC CCTTGC GCGACGGCGCCG CGCCACCCAGACTGG Pput_3274 3681396 - 3681965 + | GCN5-related N-acetyltransferase TERM 2825 3683119 - 3683147 + G 73 -8.7 -4.08216 | GACCGCACCGCTTCA CGTAGCCTGGCCC TGA GCGCCGCGCTGCG TTTTGACGCCAGTGA TERM 2826 3684097 - 3684063 - g 77 -2 -5.07486 | CATCGTCAAGAAAAA GCTGCTGGTGGACGAC CCC ATCACGCACGAGAAGC AACAAGCCGGGCAGC Pput_3275 3682336 - 3684564 + | TonB-dependent siderophore receptor TERM 2827 3685354 - 3685407 + G 82 -10.9 -3.99324 | gap 1, opp_overlap 3685372 3685374, overlap 3685346 GCCCGCGGCAGCGAT GCCGGGCAACGCCAGCAACACCTGCT GGC GGCTGGC-TTGCTCGCGCTGCTTGGC TTTGTCCTGCTGCGC Pput_3276 3684682 - 3685848 + | hypothetical protein TERM 2828 3686277 - 3686294 + G 78 -6.9 -4.56597 | opp_overlap 3686278, overlap 3686278 CGCTGACGGTCGACA ACTGCGG CAAG CCGCAGG TTTTTGCCCAGGCGC Pput_3277 3686186 - 3687196 + | periplasmic binding protein TERM 2829 3687335 - 3687278 - g 75 -12.2 -3.55444 | gap 3, overlap 3687279 3687282 3687283 CCGCCATTGGCGAAA CCAACCTGTCGCCCAGCGTGGTTGGCCAG GTG CTGGCCAACCAC-CTGTG-G-CAAGCCGA CTACCCGGTGGACCC TERM 2830 3687334 - 3687279 - g 72 -13.5 -2.73124 | gap 3, overlap 3687278 3687282 3687283 CGCCATTGGCGAAAC CAACCTGTCGCCCAGCGTGGTTGGCCAG GTG CTGGCCAACCAC-CTGTG-G-CAAGCCG ACTACCCGGTGGACC TERM 2831 3687335 - 3687282 - g 83 -14.8 -3.51708 | gap 3, overlap 3687279 3687278 3687283 CATTGGCGAAACCAA CCTG-TCGCC-CAGCGTGGTTGGCCAG GTG CTGGCCAACCAC-CTGTGGCAAGCCGA CTACCCGGTGGACCC TERM 2832 3687334 - 3687283 - g 81 -16.1 -2.70704 | gap 3, overlap 3687279 3687278 3687282 ATTGGCGAAACCAAC CTG-TCGCC-CAGCGTGGTTGGCCAG GTG CTGGCCAACCAC-CTGTGGCAAGCCG ACTACCCGGTGGACC TERM 2833 3687784 - 3687817 + G 72 -7.3 -4.20696 | overlap 3687735 3687813 CTGAGCGGTGTGCGC TGGCCTTCGGTGTGG CTGG CCGTACCGGTGGCGA TTTTCGGCTTGCTGG TERM 2834 3688059 - 3688080 + G 83 -12.3 -4.1021 | CCGTCTGTTGCCCGC CAGCGCACT GGGT GGTGCGCTG TTTCTGATTGTGGCG Pput_3278 3687196 - 3688212 + | transport system permease protein Pput_3279 3688209 - 3688997 + | ABC transporter related Pput_3280 3689551 - 3689054 - | GCN5-related N-acetyltransferase Pput_3281 3689685 - 3690164 + | hypothetical protein Pput_3282 3690224 - 3691795 + | diguanylate cyclase Pput_3283 3691939 - 3692730 + | cobyrinic acid a,c-diamide synthase TERM 2835 3693275 - 3693290 + G 74 -2.5 -4.84359 | gap 1, overlap 3693275 CGCTGCTGACCCTGG CCC-GC TGCCT GCAGGG TTTTTCTGCCGGTGG Pput_3284 3692911 - 3694248 + | major facilitator transporter Pput_3285 3697427 - 3694281 - | CzcA family heavy metal efflux protein Pput_3286 3698658 - 3697444 - | RND family efflux transporter MFP subunit TERM 2836 3697535 - 3697495 - G 73 -8.8 -3.9712 | gap 1, opp_overlap 3697517 3697520 CGACTTGAGGACAAA GCTGCC-GGCGGCCGCAAC CTGA GTACCGGCGGCCAGGCCGC TGGTGATTTCCACCT TERM 2837 3697517 - 3697541 + g 70 -9.9 -3.57144 | opp_overlap 3697495, overlap 3697520 GCGGCCGCAACCTGA GTACCGGCGGC CAG GCCGCTGGTGA TTTCCACCTGGCCAG TERM 2838 3697520 - 3697538 + g 74 -13.8 -2.91695 | opp_overlap 3697495, overlap 3697517 GCCGCAACCTGAGTA CCGGCGGC CAG GCCGCTGG TGATTTCCACCTGGC Pput_3287 3700045 - 3698651 - | outer membrane efflux protein Pput_3288 3700158 - 3700616 + | 3-dehydroquinate dehydratase TERM 2839 3701137 - 3701153 + G 78 -15.1 -2.70932 | opp_overlap 3701130 CCTGAACACCCATTT CGGCGCG GAG CGCGCCG TGCTTGGCACCGACC Pput_3289 3700613 - 3701461 + | shikimate 5-dehydrogenase Pput_3290 3702116 - 3701580 - | redoxin domain-containing protein Pput_3291 3702402 - 3702106 - | hypothetical protein Pput_3292 3702602 - 3703342 + | two component transcriptional regulator Pput_3293 3703339 - 3704625 + | integral membrane sensor signal transduction histidine kinase Pput_3294 3704790 - 3705407 + | ferric reductase domain-containing protein Pput_3295 3705422 - 3705910 + | DoxX family protein TERM 2840 3705941 - 3705911 - T 80 -15.4 -2.62184 | opp_overlap 3705914 CGGTTCGGCAGATGA GGATCGGGGGCTGC TGC GCAGCCCCCTATGC CTTCAGACGGTTCCG TERM 2841 3705914 - 3705938 + T 81 -15.7 -2.52795 | opp_overlap 3705911 TTCGGCAGATGAGGA TCGGGGGCTGC TGC GCAGCCCCCTA TGCCTTCAGACGGTT Pput_3296 3706639 - 3705944 - | hypothetical protein Pput_3297 3707465 - 3706632 - | hypothetical protein TERM 2842 3707481 - 3707522 + r 71 -9.4 -3.74693 | gap 1, opp_overlap 3707482 3707483 3707485, overlap 3707482 AAAAGTTCTCCAACA AGC-ACAACGCCCCACCTG GCCAG CAGGAGGAGCGTTGTGGCG TTTCATGGGGTAGAA TERM 2843 3707482 - 3707521 + r 74 -12.9 -2.84602 | gap 1, opp_overlap 3707482 3707483 3707485, overlap 3707481 AAAGTTCTCCAACAA GC-ACAACGCCCCACCTG GCCAG CAGGAGGAGCGTTGTGGC GTTTCATGGGGTAGA TERM 2844 3707520 - 3707482 - R 90 -15.3 -3.6279 | opp_overlap 3707481 3707482, overlap 3707483 3707485 AAAGTTCTCCAACAA GCACAACGCCCCACCTG GCCAG CAGGAGGAGCGTTGTGG CGTTTCATGGGGTAG TERM 2845 3707519 - 3707483 - R 93 -18.8 -2.77192 | opp_overlap 3707482 3707481, overlap 3707482 3707485 AAGTTCTCCAACAAG CACAACGCCCCACCTG GCCAG CAGGAGGAGCGTTGTG GCGTTTCATGGGGTA TERM 2846 3707517 - 3707485 - R 83 -15.6 -2.93073 | opp_overlap 3707482 3707481, overlap 3707483 3707482 GTTCTCCAACAAGCA CAACGCCCCACCTG GCCAG CAGGAGGAGCGTTG TGGCGTTTCATGGGG Pput_3298 3708196 - 3707540 - | hypothetical protein TERM 2847 3708097 - 3708109 + g 71 -4.8 -4.53303 | TGTCGTGGATGTATC GTGC CAGGC GCAC TTTTGTATGGCAGTA Pput_3299 3708757 - 3708206 - | hypothetical protein Pput_3300 3713476 - 3708986 - | leucine-rich repeat-containing protein TERM 2848 3713109 - 3713126 + g 72 -2.6 -4.71426 | GTGAAGTTGCGCAAT GCCACT TCGAGC AGCGGC TTTTCTTCATAGACC Pput_3301 3717995 - 3713574 - | leucine-rich repeat-containing protein TERM 2849 3716534 - 3716546 + g 73 -3.3 -4.73388 | GATAGGGGCCGAGGT CTGCG TTC CACAG TTTTTCCTCACCGTT TERM 2850 3716812 - 3716793 - G 75 -2.8 -4.8622 | GCCCGGAACGAAAAA CCCTGC AACACCCA ACAGGG TCCAGCCTTCAGCAC Pput_3302 3720434 - 3718074 - | DNA polymerase II TERM 2851 3720356 - 3720304 - G 100 -17 -3.95584 | gap 2 GCCTGAGGAATGAAA GCCACCGACTCCTGCGCCGCCAGCCG CAA CAGCCGG-GGCCC-GGCATCGGTGGC CAGCCAGAACTCCAC Pput_3303 3721691 - 3720501 - | major facilitator transporter Pput_3304 3721764 - 3722705 + | LysR family transcriptional regulator Pput_3305 3723606 - 3722686 - | LysR family transcriptional regulator Pput_3306 3723767 - 3724555 + | hypothetical protein Pput_3307 3724558 - 3725184 + | lysine exporter protein LysE/YggA TERM 2852 3725712 - 3725724 + G 74 -9.1 -3.88583 | CCCGCAGCACGCCAA GGCCT ACC AGGCC TTTCTCAACAGTTTC TERM 2853 3725881 - 3725863 - g 72 -4.5 -4.56597 | gap 1 TCCTCCCCGGAAAAA CGACTGGC CCGT GCC-GCCG ACAACATTGGCCGCA Pput_3308 3725224 - 3726306 + | hypothetical protein Pput_3309 3726439 - 3727140 + | hypothetical protein TERM 2854 3727153 - 3727173 + F 90 -16.1 -3.41878 | TAACCCAGGGTCATT CGGGGCCGC CCT GCGGCCCTG TTGTCAGTTGGCCAC Pput_3310 3727288 - 3727980 + | AzlC family protein Pput_3311 3727977 - 3728291 + | branched-chain amino acid transport Pput_3312 3728288 - 3729133 + | AraC family transcriptional regulator TERM 2855 3729149 - 3729136 - T 70 -9.5 -3.53012 | opp_overlap 3729125 TCTGCGCGCGTGAAA GGGCG GCAG CGCCC TCTCCAACTTGCGTC Pput_3313 3730399 - 3729182 - | major facilitator transporter TERM 2856 3729901 - 3729884 - G 77 -2.7 -5.07567 | GCACATTGCAAAAAA CAAGAAA GTGG CTTCTCG AGACAGCAGTAACAC TERM 2857 3730364 - 3730346 - G 76 -8.8 -4.13282 | ACCACATTTGGAAAA GCTGTAGC CCA GCGACAGC GAACGCGTTCCGGGG Pput_3314 3730856 - 3731083 + | hypothetical protein TERM 2858 3731103 - 3731121 + T 89 -13.1 -3.89212 | opp_overlap 3731103 CGCAGTTGAAAAAAA GGGCCGC TGAAC GCGGCCC TTTGATCTGTCAGTG TERM 2859 3731121 - 3731103 - T 100 -13.1 -5.44119 | opp_overlap 3731103 CGCAGTTGAAAAAAA GGGCCGC TGAAC GCGGCCC TTTGATCTGTCAGTG Pput_3315 3731613 - 3731131 - | hypothetical protein Pput_3316 3732285 - 3731614 - | electron transport protein SCO1/SenC TERM 2860 3732331 - 3732362 + r 74 -12.3 -3.21395 | gap 1, opp_overlap 3732351, overlap 3732326 3732330 GACCATGGCGGGGAT GGCCTGCAGCCCTT TGAAT ACGGGCTGC-GGCC TGTTGTCGCAGGGGT TERM 2861 3732409 - 3732431 + r 86 -7.6 -5.0065 | TGTTGCTAAGGGAGC CGCCTTCAAC TCA GTAGTAGGCG TTTTCTTTCTGGCTG Pput_3317 3733003 - 3732419 - | HesB/YadR/YfhF-family protein Pput_3318 3734096 - 3733062 - | acyltransferase 3 TERM 2862 3734053 - 3734038 - G 71 -9 -3.74519 | overlap 3734051 AAGATCTGCATGAAA TGGTGG CAGA CCACCA CCCAGGCGGCGAACG Pput_3319 3736679 - 3734292 - | fatty acid cistrans isomerase TERM 2863 3737664 - 3737644 - g 71 -9.6 -3.80573 | opp_overlap 3737659 GTGAGTACGACGAAA CCCCGGCC GAGAT GGCCGCGG TGGTCGAAGAATTCG TERM 2864 3737659 - 3737689 + G 74 -10.5 -3.73953 | opp_overlap 3737644 CCCCGGCCGAGATGG CCGC-GGTGGTCGAA GAA TTCG-CCGCCAGCGG TTTCCTCAACATCAT TERM 2865 3738651 - 3738629 - g 73 -8.4 -4.08216 | CCAGCTGCGTGAAAA GGTCGAGGAC GTG GTGCTCAACC GCACCCCGCATGGCA TERM 2866 3738776 - 3738762 - g 76 -5.6 -4.56597 | opp_overlap 3738773 CTGCCGGTGGAAAAA CGCCTG GAG CACGCG CTGGTCAAGGGCATC TERM 2867 3740343 - 3740368 + G 79 -9.1 -4.13767 | GCGGTCAGCGGCTGG TACTTCGCC CACCCGCA GGCGAAGTA TTTTGCCGTAGGCAA metH 3736776 - 3740483 + | B12-dependent methionine synthase Pput_3321 3740653 - 3740868 + | hypothetical protein TERM 2868 3740999 - 3740971 - T 95 -14.6 -3.94184 | ACAGGCAATACTAAA GCGCCTGCGAGA TTCCC TCCCACAGGCGC CCTGCTACATCACGG Pput_3322 3741142 - 3741029 - | hypothetical protein Pput_3323 3742304 - 3741228 - | periplasmic binding protein/LacI transcriptional regulator TERM 2869 3742071 - 3742128 + g 71 -12.5 -3.04144 | gap 1, overlap 3742073 GTAATCCGGCCGCTG CGGCGCGCTCAGGATCGCCCGGGC-CTG GGT CAGTGCCAGGTCGGCTCTGCGCTCGCTG TATTGCACCTGCAGG Pput_3324 3742518 - 3744170 + | sulfite reductase (ferredoxin) Pput_3325 3744154 - 3744648 + | hypothetical protein TERM 2870 3744663 - 3744693 + T 89 -17.7 -3.14931 | gap 1, opp_overlap 3744667 3744669, overlap 3744667 ATCGTCCCGCCCCAG CG-AACAGCCCGCC TCTC GGCGGGCTGTTTCG TTCATAGGCCGTGGC TERM 2871 3744667 - 3744688 + T 100 -17.3 -3.95584 | opp_overlap 3744667 3744669, overlap 3744663 TCCCGCCCCAGCGAA CAGCCCGCC TCTC GGCGGGCTG TTTCGTTCATAGGCC TERM 2872 3744688 - 3744667 - T 89 -17.3 -3.05384 | opp_overlap 3744667 3744663, overlap 3744669 TCCCGCCCCAGCGAA CAGCCCGCC TCTC GGCGGGCTG TTTCGTTCATAGGCC TERM 2873 3744686 - 3744669 - T 81 -14.1 -3.08679 | opp_overlap 3744667 3744663, overlap 3744667 CCGCCCCAGCGAACA GCCCGCC TCTC GGCGGGC TGTTTCGTTCATAGG Pput_3326 3748882 - 3744695 - | leucine-rich repeat-containing protein TERM 2874 3747178 - 3747232 + g 70 -10 -3.63991 | CATCCGGCACCTGCG CCGT-GCGACTGGCAAGGCGGCGC ACCATGTAG GCGGCGTCATGCCAG-CGCTGCGG TTGTTCGAACTCATG dkgB 3749086 - 3749889 + | 2,5-diketo-D-gluconate reductase B Pput_3328 3749895 - 3751082 + | major facilitator transporter TERM 2875 3752271 - 3752289 + G 70 -10.2 -3.5627 | GCCCAGGAGGCGGTG CCAGGCCG GGT CGGCATGG TTTCGGGGGTGATGT Pput_3329 3751245 - 3752477 + | major facilitator transporter TERM 2876 3753194 - 3753240 + G 84 -16.8 -3.01791 | gap 2, opp_overlap 3753190 CGAGCGAATCATCGA TG-TGGCGGGGGC-CTTGGGCT ATGAC AGCCCAAGTGCCTTCGCCAGCA TGTTCAAACGCCAGT Pput_3330 3752514 - 3753287 + | AraC family transcriptional regulator Pput_3331 3753429 - 3754577 + | peptidase M14, carboxypeptidase A TERM 2877 3754594 - 3754640 + T 80 -14.4 -3.02461 | gap 1 CCTCGCCTTGCGCAG CCCCTGCAGGAGCAGCCCGTC GCGATA GGC-GGCGGCTCCTTCGGGGG TATTGACCGCCGTTC Pput_3332 3755625 - 3754654 - | spore coat U domain-containing protein Pput_3333 3758015 - 3755622 - | fimbrial biogenesis outer membrane usher protein Pput_3334 3758804 - 3758028 - | type 1 pili usher pathway chaperone CsuC Pput_3335 3759348 - 3758845 - | spore coat U domain-containing protein Pput_3336 3759885 - 3759352 - | spore coat U domain-containing protein Pput_3337 3760440 - 3759904 - | spore coat U domain-containing protein TERM 2878 3760391 - 3760361 - G 74 -10.3 -3.72576 | CGCGCCTGGATGAAA CCGGTGGTGCTGC CATGC ACCGCACCGCCGG GGACCAGCAGCGGGC Pput_3338 3761064 - 3760471 - | spore coat U domain-containing protein TERM 2879 3761059 - 3761071 + g 100 -4.8 -5.80817 | GCGGCGCAGCCGATG TGGC ATAAC GCCA TTTTTTTGTATTAGC TERM 2880 3761830 - 3761814 - g 76 -13.7 -3.17723 | CGATGCCGAAGGCAA CGGCCAG GTG CTGGCCG AAGTGGCCGACCCAG Pput_3339 3761266 - 3763512 + | multi-sensor signal transduction histidine kinase Pput_3340 3763528 - 3763989 + | response regulator receiver protein TERM 2881 3765865 - 3765881 + G 76 -13.7 -3.12668 | opp_overlap 3765849 TGGCAAAGGTTCGGG CCTGGGC CTG GCCCAGG TGTTCGGCTTTGCCA Pput_3341 3764003 - 3766390 + | multi-sensor hybrid histidine kinase TERM 2882 3766948 - 3766897 - g 70 -10.3 -3.5393 | ACTACCCGCGCGAAA TCGTCCAGC-AGCGCCGCCAGCA GGACAAGG CGCTGG-ACCGCTTGCTGGACGA ATACATGGACATCGA Pput_3342 3766848 - 3767090 + | hypothetical protein Pput_3343 3767223 - 3768296 + | AFG1 family ATPase Pput_3344 3768400 - 3769626 + | hypothetical protein Pput_3345 3771604 - 3769715 - | AMP-dependent synthetase and ligase TERM 2883 3772591 - 3772553 - g 70 -8 -4.09685 | overlap 3772554 GTGTACCCGCGAAAA CGTGACAGCGAAGCCCTG CAA CAGGCCTTCGCGATCCTG CGCCGGCTGGTCGCT Pput_3346 3771785 - 3772651 + | LysR family transcriptional regulator Pput_3347 3773779 - 3772625 - | CBS domain-containing protein TERM 2884 3773842 - 3773821 - R 89 -8 -4.85782 | gap 1, opp_overlap 3773820 CTGTTTAAAAAGAAA GCCCA-GCC GAGTT GGCCTGGGC CTCGTATTGCGCATG TERM 2885 3774061 - 3774026 - R 79 -14 -2.87132 | opp_overlap 3774025 3774024 3774028 CCCTTTCGCGACACA CGGCCCCACAGGGG ATTGCGTA CCCCTGTGGGAGCG GCCTTGTGTCGCGAT Pput_3348 3775418 - 3774099 - | integral membrane sensor signal transduction histidine kinase TERM 2886 3775039 - 3775078 + g 74 -14.2 -2.52015 | opp_overlap 3775016 3775017, overlap 3775018 3775017 3775038 CCCAGGCGCCGGTAG TCGGCACGCAGGGCCAGC AGTT GCTGGCCTTCGGGGCCGA GTTCATGGCTATCGG TERM 2887 3775213 - 3775194 - G 76 -8.5 -4.20696 | GTAGTAACCGGAAAA CGGCCGC TGATAG GCAGCCG AGATGCGCCGCTCAT Pput_3349 3776083 - 3775415 - | two component transcriptional regulator Pput_3350 3776398 - 3776084 - | peptidase Pput_3351 3776706 - 3776398 - | peptidase Pput_3352 3776848 - 3778005 + | hypothetical protein TERM 2888 3778153 - 3778117 - f 72 -9.5 -3.62591 | gap 1, opp_overlap 3778121 3778126, overlap 3778120 3778121 3778125 3778126 CGGACAATCCCGAAA GAAC-GAAAGGCGCCC GTATAT GGGCGCTTTTCTGTCC TTAATCGTCCCGGTA TERM 2889 3778148 - 3778121 - f 70 -11.3 -2.95918 | opp_overlap 3778121 3778126, overlap 3778120 3778117 3778125 3778126 CAATCCCGAAAGAAC GAAAGGCGCCC GTATAT GGGCGCTTTTC TGTCCTTAATCGTCC TERM 2890 3778121 - 3778148 + F 80 -14.2 -2.94695 | opp_overlap 3778121 3778120 3778117 3778125 3778126, overlap 3778126 CAATCCCGAAAGAAC GAAAGGCGCCCG TATA TGGGCGCTTTTC TGTCCTTAATCGTCC TERM 2891 3778126 - 3778143 + F 93 -10.5 -4.62002 | opp_overlap 3778126 3778125 3778121 3778120 3778117, overlap 3778121 CCGAAAGAACGAAAG GCGCCCG TATA TGGGCGC TTTTCTGTCCTTAAT Pput_3353 3778241 - 3779422 + | phage integrase family protein Pput_3354 3779701 - 3779408 - | hypothetical protein Pput_3355 3779991 - 3779698 - | hypothetical protein Pput_3356 3780289 - 3780065 - | hypothetical protein Pput_3357 3780536 - 3781120 + | hypothetical protein TERM 2892 3781785 - 3781773 - g 75 -4.1 -4.68384 | ATCGACCCAAGAAAA CAAGC ACT ACTTG ATAAATGCTTTAGCT Pput_3358 3781173 - 3782039 + | hypothetical protein Pput_3359 3782878 - 3782378 - | hypothetical protein Pput_3360 3783324 - 3782875 - | hypothetical protein TERM 2893 3783035 - 3783005 - G 80 -14.9 -3.1875 | gap 1, opp_overlap 3783031 GATATGTCAATCGAA TCGCGAA-CGCCTA CGCC TAGGCGCTTCGCGA TGGCCTGGGCATAGG TERM 2894 3783361 - 3783347 - R 89 -8.5 -4.97158 | CCAGACGAAAGAAAA CCCGC GCATG GCGGG CTGCATGAATTTCGG TERM 2895 3783400 - 3783388 - R 93 -6.2 -5.60993 | TCGGGCACAAAAAAA CCGC TCAAG GCGG CCGTTTGGTGTCAGG Pput_3361 3784230 - 3783421 - | hypothetical protein Pput_3362 3786192 - 3784255 - | hypothetical protein TERM 2896 3786229 - 3786213 - R 100 -10.8 -5.06414 | opp_overlap 3786213 CTTCCTCAATAAAAA GCCCGC ACGGG GCGGGC TTGGTAACTGCTGCG Pput_3363 3789301 - 3786248 - | hypothetical protein Pput_3364 3789675 - 3789298 - | hypothetical protein Pput_3365 3790157 - 3789678 - | hypothetical protein Pput_3366 3790624 - 3790154 - | hypothetical protein Pput_3367 3793724 - 3790812 - | prophage tail length tape measure TERM 2897 3792175 - 3792196 + g 71 -9.4 -3.80014 | overlap 3792169 3792172 3792189 3792192 GCGTTCTTCTTCGCC TCGCGGGC TTTGAT GTCCGCGA TTTCCTGCTCGATGT TERM 2898 3793761 - 3793748 - R 100 -9.5 -5.60993 | opp_overlap 3793748 3793746 3793738 CCGGGCATAAAAAAA CCCGC CGAA GCGGG TCTTGTATGTGTTTG TERM 2899 3793748 - 3793761 + r 70 -9.5 -3.43689 | opp_overlap 3793748, overlap 3793746 3793738 CCGGGCATAAAAAAA CCCGC CGAA GCGGG TCTTGTATGTGTTTG Pput_3368 3794199 - 3793780 - | hypothetical protein TERM 2900 3794556 - 3794580 + r 70 -5 -4.48987 | overlap 3794543 CTGCGCCGTCAGCCC GAGGCGCT CATGCTTCC AGCGCTTC TTTTCGTTCTCGGGC Pput_3369 3795112 - 3794627 - | hypothetical protein TERM 2901 3795164 - 3795133 - R 87 -12.2 -4.07568 | gap 1, overlap 3795134 TCCTCTGCGGTAAAA GGCCCGACGCACACC GCA GG-GCGCGCCGGGCA AAGGGTTAAGCGGTG TERM 2902 3795163 - 3795134 - R 83 -15.7 -3.04398 | gap 1, overlap 3795133 CCTCTGCGGTAAAAG GCCCGACGCACACC GCA GG-GCGCGCCGGGC AAAGGGTTAAGCGGT Pput_3370 3796339 - 3795170 - | Ig domain-containing protein TERM 2903 3796384 - 3796371 - R 100 -9.5 -5.42862 | ATAGGCGTAAAAAAA CCGCC ATGT GGCGG TGGATGTTGAGGGCT Pput_3371 3796806 - 3796399 - | hypothetical protein Pput_3372 3797189 - 3796803 - | hypothetical protein Pput_3373 3797572 - 3797192 - | hypothetical protein Pput_3374 3797968 - 3797576 - | hypothetical protein Pput_3375 3798640 - 3798008 - | hypothetical protein Pput_3376 3799613 - 3798645 - | hypothetical protein Pput_3377 3800336 - 3799626 - | hypothetical protein TERM 2904 3800143 - 3800156 + g 72 -4.5 -4.57341 | gap 1, overlap 3800141 3800145 CGCGCCTTTTCTTCG GCCTCG CGG CG-GGC TTTTTCGGCAGCCTT TERM 2905 3800404 - 3800386 - R 100 -13.8 -5.24129 | TGCGGGTACAAAAAA GCCCCGGC TCA GCCAGGGC TTGGAAATTGCGCGC TERM 2906 3800413 - 3800453 + r 78 -14.1 -2.52464 | opp_overlap 3800413 3800412, overlap 3800415 3800416 CCAGGGCTTGGAAAT TGCGCGCCACGAAATAGAG GCG CTGTGTTTTGTGGCGCGGA TCAGTTCAGGCCGGC Pput_3378 3801500 - 3800454 - | SPP1 family phage head morphogenesis protein Pput_3379 3802914 - 3801490 - | hypothetical protein Pput_3380 3804224 - 3802923 - | hypothetical protein TERM 2907 3802995 - 3803024 + g 71 -5.5 -4.31433 | overlap 3802991 3802996 GTGGATGAAGTAGCC GCCGGCGTCGTTC GCGT GGTCGACGCCAGA TTTCTTGTCGGGCTC Pput_3381 3804672 - 3804211 - | hypothetical protein TERM 2908 3804239 - 3804286 + g 78 -6.9 -4.5774 | gap 1 TCAGGCTTCCTCGCA TCCACCACGTCGACCTGCACCC GGGTA GGCGGCACGTTGTCGTGG-GGA TTTTCGTTCTTGGTC Pput_3382 3805312 - 3804704 - | hypothetical protein Pput_3383 3806057 - 3805620 - | hypothetical protein Pput_3384 3806350 - 3806054 - | hypothetical protein Pput_3385 3806503 - 3806739 + | hypothetical protein Pput_3386 3807015 - 3806746 - | hypothetical protein Pput_3387 3807326 - 3807015 - | hypothetical protein TERM 2909 3807381 - 3807398 + r 72 -9.8 -3.67141 | opp_overlap 3807381 TCGGGCAATAAAAAA CCCGGC ACTGGG GCCGGG TTTGCGTGAGCTTCT TERM 2910 3807398 - 3807381 - R 100 -9.8 -5.4505 | opp_overlap 3807381 TCGGGCAATAAAAAA CCCGGC ACTGGG GCCGGG TTTGCGTGAGCTTCT TERM 2911 3807630 - 3807611 - R 71 -4.2 -4.53602 | overlap 3807613 GCCAGAGCAAACAAA CCCGCCAT CCGG ATAGCCGG CATAGCCACTGGAAT Pput_3388 3808281 - 3807736 - | hypothetical protein Pput_3389 3809023 - 3808421 - | bacteriophage lambda NinG family protein Pput_3390 3809421 - 3809023 - | NinB family protein Pput_3391 3809890 - 3809612 - | hypothetical protein Pput_3392 3810285 - 3809890 - | hypothetical protein Pput_3393 3811046 - 3810285 - | hypothetical protein TERM 2912 3811011 - 3811028 + g 73 -6.3 -4.31766 | gap 1 GGCCGTGGCCATGAT CTGCGTCA CGC TG-CGCAG TTTCTGTTGTGTGGT Pput_3394 3811819 - 3811043 - | hypothetical protein Pput_3395 3812565 - 3811816 - | phage-encoded protein TERM 2913 3812484 - 3812540 + g 74 -13 -3.34609 | gap 1, overlap 3812484 3812485 TCTCCGAGCTGCTCA TCGTGACCTCGCGCGCCACGAAACCGT GGTT AGGATTTTGTGGCGCGAG-GGCCACGG TATTGCTTTGGATGG TERM 2914 3812485 - 3812539 + g 74 -14.3 -2.60283 | gap 1, overlap 3812484 3812484 CTCCGAGCTGCTCAT CGTGACCTCGCGCGCCACGAAACCGT GGTT AGGATTTTGTGGCGCGAG-GGCCACG GTATTGCTTTGGATG TERM 2915 3812608 - 3812625 + r 90 -8.4 -5.1287 | opp_overlap 3812608 AATGCAGTACAAGAA GCCGGT CTAGCC ACCGGC TTTTTTGCGTCTGCG TERM 2916 3812848 - 3812865 + r 86 -11.3 -4.13995 | ATTGCCCTTCCCGTC GAGCTGG ATCT CCAGCTC TTTGCTTTCTGGCAC Pput_3396 3813090 - 3812899 - | hypothetical protein Pput_3397 3813366 - 3813118 - | hypothetical protein Pput_3398 3813463 - 3814305 + | putative phage repressor TERM 2917 3814598 - 3814614 + G 100 -7.2 -5.60993 | TTCAACGAGCGCAAG GTCGCC CAAAT GGCGGC TTTTTTTCTCCAACG Pput_3399 3814577 - 3815152 + | hypothetical protein Pput_3400 3815143 - 3815547 + | hypothetical protein TERM 2918 3815574 - 3815559 - T 79 -11.8 -3.55071 | opp_overlap 3815559 CTAGATTTGCTGAAA GCCCGC CACG GCGGGC TTTTTTGCGCCTATC TERM 2919 3815559 - 3815574 + T 100 -11.8 -5.04385 | opp_overlap 3815559 CTAGATTTGCTGAAA GCCCGC CACG GCGGGC TTTTTTGCGCCTATC Pput_3401 3815914 - 3815588 - | hypothetical protein TERM 2920 3816382 - 3816401 + H 77 -11.4 -3.57462 | opp_overlap 3816382 3816370 GAACGATTCACTGAA GCACCTGG GCGA CCGGGTGC TTTGGGAATCCACTG Pput_3402 3816426 - 3816614 + | hypothetical protein Pput_3403 3816611 - 3816865 + | hypothetical protein Pput_3404 3817241 - 3817519 + | hypothetical protein Pput_3405 3817516 - 3817758 + | hypothetical protein TERM 2921 3818144 - 3818132 - g 83 -9.1 -4.26076 | GGAGGTTGAGGAAAA GGTGC GCG GCACC TTCGGCGGACGCTTC Pput_3406 3817779 - 3818213 + | hypothetical protein Pput_3407 3818235 - 3818651 + | hypothetical protein Pput_3408 3818648 - 3818851 + | hypothetical protein Pput_3409 3818848 - 3819069 + | hypothetical protein Pput_3410 3819358 - 3820089 + | hypothetical protein Pput_3411 3820086 - 3820649 + | siphovirus Gp157 family protein TERM 2922 3820680 - 3820695 + G 100 -11.8 -4.64766 | opp_overlap 3820671 3820670 ATCAATCGACCTGGA GGCCGC TAAA GCGGCC TTTTTCGCGTCTGGC Pput_3412 3820657 - 3821169 + | hypothetical protein Pput_3413 3821419 - 3821940 + | hypothetical protein Pput_3414 3822383 - 3821937 - | hypothetical protein Pput_3415 3822485 - 3823042 + | hypothetical protein Pput_3416 3823287 - 3823066 - | hypothetical protein Pput_3417 3823726 - 3823451 - | hypothetical protein TERM 2923 3823747 - 3823726 - G 74 -13.7 -2.93338 | overlap 3823723 CACATAAACGAATCA CGCCACCCT AGCG AGGGCGGCG CCTGCAATGGAGCCA Pput_3418 3823762 - 3824145 + | hypothetical protein Pput_3419 3824652 - 3825071 + | hypothetical protein Pput_3420 3825436 - 3825134 - | hypothetical protein TERM 2924 3825504 - 3825490 - H 75 -10 -3.70676 | overlap 3825486 CATAGCCAAAACGAA GCGGTT CGC AACCGC ACCTGCCTGATTCGT Pput_3421 3825608 - 3826402 + | hypothetical protein Pput_3422 3826399 - 3826668 + | hypothetical protein Pput_3423 3826665 - 3826988 + | hypothetical protein Pput_3424 3826985 - 3827377 + | hypothetical protein Pput_3425 3827374 - 3827724 + | hypothetical protein Pput_3426 3827956 - 3828435 + | hypothetical protein TERM 2925 3828506 - 3828485 - f 72 -12.9 -2.52543 | opp_overlap 3828484 3828475 ATGTCCCCCAACCGA GGCGCCGGC ACGG GCCGGCGCA GTCGGTTACCACTTC Pput_3427 3828540 - 3828752 + | phage transcriptional regulator, AlpA Pput_3428 3828816 - 3829172 + | putative 6-pyruvoyl tetrahydropterin synthase Pput_3429 3829960 - 3829199 - | hypothetical protein TERM 2926 3829998 - 3829987 - R 83 -3.6 -5.24531 | ACGCTCGATAAAAAA GCAC AATG GCGC CTTTTCAAAGCATGG Pput_3430 3830495 - 3830028 - | hypothetical protein TERM 2927 3830580 - 3830594 + H 88 -4.2 -5.44119 | AAAGTCATGAACACC GCCTTA CCT TCAGGC TTTTTTTACCGTAGA TERM 2928 3831023 - 3831008 - g 74 -4.6 -4.57569 | overlap 3831009 3831010 CGAGCTGCTGAAAAA CCCGCC GGCC GGCGAA GAAGCCTTCCTCGTA TERM 2929 3831981 - 3831969 - g 78 -6.9 -4.65895 | opp_overlap 3831970 GGCCTGACCGAAAAA GCCCG CGC CGAGC TGGGCCTGGGTGCTT TERM 2930 3833427 - 3833405 - g 72 -12 -3.39018 | opp_overlap 3833405, overlap 3833403 GCAGTACGCGAAAGA CATCGACAGC ATG GCTGCCGACG TTTACCGCTACCTGA Pput_3431 3830901 - 3833510 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2931 3833531 - 3833560 + T 100 -22.3 -4.20817 | opp_overlap 3833531 3833535, overlap 3833535 GTTACACGCTGTAAA CAAAGCCCCGGCA GCGA TGCCGGGGCTTTG TTGTTTTGGCCTGTG TERM 2932 3833560 - 3833531 - T 100 -22.3 -3.56643 | opp_overlap 3833531 3833535, overlap 3833535 GTTACACGCTGTAAA CAAAGCCCCGGCA GCGA TGCCGGGGCTTTG TTGTTTTGGCCTGTG TERM 2933 3833535 - 3833556 + T 100 -17.3 -4.67697 | opp_overlap 3833535 3833531, overlap 3833531 CACGCTGTAAACAAA GCCCCGGCA GCGA TGCCGGGGC TTTGTTGTTTTGGCC TERM 2934 3833556 - 3833535 - T 100 -17.3 -4.42062 | opp_overlap 3833531 3833535, overlap 3833531 CACGCTGTAAACAAA GCCCCGGCA GCGA TGCCGGGGC TTTGTTGTTTTGGCC TERM 2935 3833654 - 3833596 - T 90 -16.1 -3.53012 | gap 2, opp_overlap 3833587 3833596 CGCTTCGCGGCTAAA GCCGCTCTTAC-AGGGCCCCCAC-GGTGT TCG AGACCTGCGCAGGCCCTCGTAGGAGCGGC TTTAGCCGCGAAGCG TERM 2936 3833596 - 3833654 + T 82 -13.9 -3.53012 | gap 2, opp_overlap 3833596, overlap 3833587 CGCTTCGCGGCTAAA GCCGCTCTTAC-AGGGCCCCCAC-GGTGT TCG AGACCTGCGCAGGCCCTCGTAGGAGCGGC TTTAGCCGCGAAGCG prpD 3835170 - 3833686 - | 2-methylcitrate dehydratase Pput_3433 3836532 - 3835342 - | putative AcnD-accessory protein PrpF TERM 2937 3836570 - 3836586 + r 82 -13.7 -3.53012 | opp_overlap 3836563 CGGTGAAATACCCTG GGGCTGC CTT GCAGCCC TTTCGCGACACAAGG TERM 2938 3836642 - 3836600 - R 70 -9.8 -3.48276 | gap 1, opp_overlap 3836600 3836631 3836632, overlap 3836563 CCTTTCGCGACACAA GGCCGCTCCCAC-AGGTAC TGCGCC GCCCTTTGCGGGAGCGGCC TTGTGTCGCGAAAGG TERM 2939 3836672 - 3836656 - R 88 -15.1 -3.53012 | opp_overlap 3836632 3836631, overlap 3836666 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CCGATTCATGCTCAG Pput_3434 3839275 - 3836684 - | aconitate hydratase TERM 2940 3839385 - 3839422 + r 73 -12 -2.9518 | gap 1, overlap 3839387 3839393 AGGCCGGCGCATTCG GGGGCACGCCCGCTCCC ACAAG GGGAACGGGT-TGCCTC TCTATAGCTATTCAG TERM 2941 3839387 - 3839420 + r 70 -11 -3.02626 | gap 1, overlap 3839385 3839393 GCCGGCGCATTCGGG GGCACGCCCGCTCCC ACAAG GGGAACGGGT-TGCC TCTCTATAGCTATTC Pput_3435 3840561 - 3839434 - | methylcitrate synthase prpB 3841512 - 3840622 - | 2-methylisocitrate lyase Pput_3437 3842225 - 3841509 - | GntR family transcriptional regulator Pput_3438 3842514 - 3843068 + | hypothetical protein Pput_3439 3843074 - 3844609 + | hypothetical protein TERM 2942 3844881 - 3844863 - g 89 -17.4 -3.14564 | CGATTTCGTCATCAA GCCGGCGC AAG GCGCCGGC GGTGACGGCATCCTG Pput_3440 3844609 - 3845589 + | alpha-L-glutamate ligase-like protein TERM 2943 3845614 - 3845596 - f 70 -10.2 -3.24976 | overlap 3845594 3845592 3845597 AACCGCTGAAATACA GGGGCTGC GTT GCAGCCCA TTCGCAGCACAAGGT TERM 2944 3845613 - 3845597 - f 75 -13.7 -2.54504 | overlap 3845596 3845594 3845592 ACCGCTGAAATACAG GGGCTGC GTT GCAGCCC ATTCGCAGCACAAGG TERM 2945 3845731 - 3845741 + F 77 -8.2 -4.25283 | TGAATGTCGTACCCA GCGC TAG GCGC TTTTCCTGCACAGGT Pput_3441 3845798 - 3847138 + | para-aminobenzoate synthase, subunit I Pput_3442 3847219 - 3847953 + | phosphoadenosine phosphosulfate reductase cysB 3849097 - 3848123 - | transcriptional regulator CysB TERM 2946 3849162 - 3849187 + r 71 -4.8 -4.67982 | overlap 3849164 ATATAACTATATTAG TGGTTCTGGA AATAAA TCTAGAACTA TTTTGTTACATGCCC Pput_3444 3849723 - 3849226 - | UspA domain-containing protein Pput_3445 3850897 - 3849848 - | 2-dehydropantoate 2-reductase TERM 2947 3850509 - 3850454 - G 71 -13.2 -3.06133 | gap 1 CAAGGCCGGACGCAA CTGCTCCTCGACACCCAGGCCGTTCTG CAA CAGCACCACCTTGGCGCCG-GGCGCAG CAGCCTGGACGATCA TERM 2948 3850756 - 3850742 - G 76 -7 -4.48221 | overlap 3850744 CATCAACCCATAAAA GCCGCC GAT GGCGCC ACTGCCGATGATGCC Pput_3446 3851028 - 3852104 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2949 3852142 - 3852124 - T 100 -17.4 -5.4505 | opp_overlap 3852124 TGCGGGAATAAAAAA CGCCGGGC ACT GCCCGGCG TTTTTTTGTTGTGTC TERM 2950 3852124 - 3852142 + T 100 -17.4 -5.9218 | opp_overlap 3852124 TGCGGGAATAAAAAA CGCCGGGC ACT GCCCGGCG TTTTTTTGTTGTGTC Pput_3447 3852456 - 3852175 - | hypothetical protein Pput_3448 3852964 - 3853215 + | outer membrane lipoprotein OprI TERM 2951 3853260 - 3853239 - T 91 -15.9 -3.63694 | opp_overlap 3853239 ACGGATTGTTAAGAA GCCGACCCA CTTG TGGGTCGGC TTTTTTATTGCCTTT TERM 2952 3853239 - 3853260 + T 100 -15.9 -5.52096 | opp_overlap 3853239 ACGGATTGTTAAGAA GCCGACCCA CTTG TGGGTCGGC TTTTTTATTGCCTTT TERM 2953 3853328 - 3853309 - T 100 -10.7 -4.88736 | CAGCAGGTACAAAAA GGCCTGC ACTAAG GCAGGCC TGGGTGTGTCGAAAT Pput_3449 3854325 - 3853348 - | ErfK/YbiS/YcfS/YnhG family protein Pput_3450 3854759 - 3854439 - | hypothetical protein Pput_3451 3855393 - 3854788 - | arylesterase Pput_3452 3855404 - 3856090 + | ABC transporter related TERM 2954 3856185 - 3856218 + G 74 -12.5 -3.34398 | gap 1, overlap 3856184 GCTGTTCTTTGCCCT GTTGGTGGCGGTAGCT GCC AGC-ACCGCCATCGGC TATTTCGGCGCCCGC Pput_3453 3856096 - 3858594 + | hypothetical protein TERM 2955 3858682 - 3858650 - T 71 -11.4 -3.09803 | gap 1 CAAGCTGACGCAAGA CGGGCCAGTCAGTCC GTCG AAACTGACTGGCC-G TAACGGATGCTGCTC greB 3859146 - 3858658 - | transcription elongation factor GreB Pput_3455 3859466 - 3859158 - | hypothetical protein TERM 2956 3859693 - 3859641 - R 86 -17.7 -2.53911 | overlap 3859644 CCAAGTTGCAAGCGA CAAGCCGCAAGCAAGAACACGCCGA GTA TTGGCCCGCGCTTGCCTGCGGCTCG TAGCTCACAGCGTGC TERM 2957 3859690 - 3859644 - R 90 -15.8 -3.42056 | overlap 3859641 AGTTGCAAGCGACAA GCCGCAAGCAAGAACACGCCGA GTA TTGGCCCGCGCTTGCCTGCGGC TCGTAGCTCACAGCG Pput_3456 3860152 - 3859715 - | DoxX family protein Pput_3457 3861706 - 3860264 - | lytic transglycosylase, catalytic TERM 2958 3860548 - 3860528 - G 83 -4.6 -5.03314 | overlap 3860542 GGCACTGGCAAAAAA CTTGCGCC GGATA AGCGCCAG GTAACGGGCACTGGC TERM 2959 3862180 - 3862170 - g 73 -3.2 -4.72272 | overlap 3862172 CCGCTGCAGGAAAAA GCCT TGG AAGC CCAGCTGACACTGGC Pput_3458 3861756 - 3862625 + | TatD-related deoxyribonuclease Pput_3459 3862753 - 3864231 + | methyl-accepting chemotaxis sensory transducer TERM 2960 3864244 - 3864279 + F 77 -11 -3.57144 | TAGTCACCATAGCCA GCTTCGATTGGCCCCC GCGT GGGGGCCGCACTAAGC TTTGGGCATGACCGA Pput_3460 3864307 - 3864675 + | hypothetical protein Pput_3461 3865514 - 3864717 - | Acyl-CoA thioesterase-like protein Pput_3462 3866370 - 3865591 - | CHAD domain-containing protein Pput_3463 3866663 - 3866385 - | hypothetical protein TERM 2961 3867640 - 3867594 - g 82 -14.3 -3.37533 | gap 1, opp_overlap 3867594 3867627 3867629, overlap 3867587 CCGGAAAACCAGCAA CCGGCAG-CGGCCCCGGAGCGC GAGG GCGCACCGAAGTCGGCCACCGG CTCTTTCATCATCGA Pput_3464 3866841 - 3867881 + | patatin TERM 2962 3867981 - 3867951 - T 100 -15.5 -4.56597 | opp_overlap 3867952 3867956, overlap 3867952 CGCGGCTGGCAAAAA CGAAACAGGCCGC ACGAG GCGGCCTGTTTCT TCATGCAACGAACAC TERM 2963 3867980 - 3867952 - T 95 -19 -3.33744 | opp_overlap 3867952 3867956, overlap 3867951 GCGGCTGGCAAAAAC GAAACAGGCCGC ACGAG GCGGCCTGTTTC TTCATGCAACGAACA TERM 2964 3867952 - 3867980 + T 95 -19 -3.14132 | opp_overlap 3867951 3867952, overlap 3867956 GCGGCTGGCAAAAAC GAAACAGGCCGC ACGAG GCGGCCTGTTTC TTCATGCAACGAACA TERM 2965 3867956 - 3867976 + T 100 -14 -4.24342 | opp_overlap 3867952 3867951, overlap 3867952 CTGGCAAAAACGAAA CAGGCCGC ACGAG GCGGCCTG TTTCTTCATGCAACG Pput_3465 3869869 - 3867998 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2966 3868493 - 3868531 + g 70 -10.2 -3.61398 | GGTGGTCTCAGGGTC GAGCTCGATGGCGGTGCT GTT GGCACCCTCATCCAGCAC TTCTTCAGAGAACGC TERM 2967 3869960 - 3869941 - R 100 -13.6 -4.77173 | opp_overlap 3869941 TCCTGATAAAAGAAA GGCGCATC CGAG GATGCGCC TTTTCTTAGCAAACG TERM 2968 3869941 - 3869960 + r 95 -13.6 -4.63218 | opp_overlap 3869941 TCCTGATAAAAGAAA GGCGCATC CGAG GATGCGCC TTTTCTTAGCAAACG Pput_3466 3870323 - 3870051 - | histone family protein DNA-binding protein Pput_3467 3872872 - 3870476 - | ATP-dependent protease La TERM 2969 3873007 - 3872977 - R 100 -14.1 -4.34402 | gap 1, opp_overlap 3872980 3872984, overlap 3872980 GCTTGCACAGGAAAA GC-AGAAAGGGGCC CGTA GGCCCCCTTCTTGC TTGCAACCGAGAACC TERM 2970 3873003 - 3872980 - R 81 -14.6 -3.16202 | opp_overlap 3872980 3872984, overlap 3872977 TGCACAGGAAAAGCA GAAAGGGGCC CGTA GGCCCCCTTC TTGCTTGCAACCGAG TERM 2971 3872980 - 3873003 + r 77 -12.4 -3.33696 | opp_overlap 3872980 3872977, overlap 3872984 TGCACAGGAAAAGCA GAAAGGGGCC CGTA GGCCCCCTTC TTGCTTGCAACCGAG TERM 2972 3872984 - 3873000 + r 71 -9.3 -3.81146 | opp_overlap 3872980 3872977, overlap 3872980 CAGGAAAAGCAGAAA GGGGCCC GTA GGCCCCC TTCTTGCTTGCAACC clpX 3874320 - 3873037 - | ATP-dependent protease ATP-binding subunit clpP 3875070 - 3874429 - | ATP-dependent Clp protease proteolytic subunit TERM 2973 3875138 - 3875108 - R 73 -12 -3.02511 | gap 1, opp_overlap 3875107 3875108 3875115, overlap 3875115 GTCATGGCTTGAATA CGCACAAGCCAGC TCGAAG GCTGGCTTGTG-G AGGTTTCCTACGAGA tig 3876475 - 3875162 - | trigger factor Pput_3471 3877024 - 3876725 - | hypothetical protein TERM 2974 3877039 - 3877055 + H 70 -10.8 -3.34715 | opp_overlap 3877050, overlap 3877037 TCGTGATGTCCTTTG CCGGCC GAACA GGCCGG TGTTTCAACCGGCTG TERM 2975 3877201 - 3877175 - H 100 -10.9 -5.00138 | gap 1, opp_overlap 3877175, overlap 3877169 GACCCAAAGCAAAAA GGCGCC-CGATC TCAC GATCAAGGCGCC TTTCAGGAATATGGG TERM 2976 3877454 - 3877423 - H 81 -10.2 -4.14392 | gap 1, overlap 3877427 GCGTAACGCTTAAAA CAAAGGCGCC-AGAT GCT ATCGAGGCGCCCTTG AAAAATATGGGGTGG TERM 2977 3877450 - 3877427 - H 79 -7.4 -4.66535 | gap 1, overlap 3877423 AACGCTTAAAACAAA GGCGCC-AGAT GCT ATCGAGGCGCC CTTGAAAAATATGGG TERM 2978 3877871 - 3877886 + H 71 -6.8 -4.34486 | GCCCTTGGCCCATGT CGTGCG AGAA TGCACG TTCTTTATTGTTCCT Pput_3472 3877880 - 3878779 + | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 2979 3878818 - 3878798 - T 91 -12.6 -4.19238 | opp_overlap 3878798 CGCGTAATGCGAAAA CGGCACCT TTTTC AGGTGCCG TTTTTTTTGCCCGTG TERM 2980 3878798 - 3878818 + T 100 -12.6 -5.76949 | opp_overlap 3878798 CGCGTAATGCGAAAA CGGCACCT TTTTC AGGTGCCG TTTTTTTTGCCCGTG Pput_3473 3880661 - 3878922 - | extracellular solute-binding protein TERM 2981 3880308 - 3880319 + g 76 -5.8 -4.57073 | CTTGTCCGACTGCAT CTGC GTCT GCAG TTTTTCCACCACATC Pput_3474 3880973 - 3880701 - | small integral membrane protein-like protein TERM 2982 3880849 - 3880828 - G 84 -10.9 -4.2461 | overlap 3880829 AGGCCGATGAACAAA CGGTCACCA CGGC TGGTGACCA GCGGCAAAAAGCCCC TERM 2983 3880848 - 3880829 - G 70 -12.2 -3.14284 | overlap 3880828 GGCCGATGAACAAAC GGTCACCA CGGC TGGTGACC AGCGGCAAAAAGCCC TERM 2984 3880882 - 3880860 - G 78 -6.8 -4.60487 | GACCAGCGGCAAAAA GCCCCGTCGC TCT ACGCAGGGGC GACGCAGTTCAAGCA Pput_3475 3881786 - 3880986 - | binding-protein-dependent transport systems inner membrane component TERM 2985 3881223 - 3881211 - G 86 -4.7 -5.22289 | CATGAAACAGAAAAA CGCCG TGA CGCCG ATGCCGGAGCCAATC TERM 2986 3881455 - 3881436 - G 80 -5.6 -4.6902 | overlap 3881448 3881450 3881451 GTACAACTGGAAAAA CGGCAGCA GGAA CACCGCCG GTGGCGCCATGCGGT Pput_3476 3882656 - 3881790 - | binding-protein-dependent transport systems inner membrane component TERM 2987 3882476 - 3882447 - G 76 -6.3 -4.49556 | overlap 3882449 GGCCGAGTAAATAAA CTGGCGCAGCA ATGCGTCG TGCAGCGCCGG GTCGCGCAGTACCTG Pput_3477 3883750 - 3882653 - | ABC transporter related Pput_3478 3884844 - 3883750 - | ABC transporter related TERM 2988 3885979 - 3885965 - g 72 -4.2 -4.56597 | overlap 3885967 3885974 CCGCGCCTGGAAAAA GCCTTG AAA CAAGCC GGCCTGCTATTGGAG TERM 2989 3886778 - 3886741 - g 70 -11.9 -3.20723 | GGTCGAGCAAGCCAA TGGCAACCTGTCGGCGG TAGC CCGCCGACTGGGTATCA GCCGTACCACACTGT Pput_3479 3885068 - 3886816 + | Fis family GAF modulated sigma54 specific transcriptional regulator Pput_3480 3888610 - 3886922 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Pput_3481 3890189 - 3888624 - | methyl-accepting chemotaxis sensory transducer TERM 2990 3889043 - 3889092 + g 70 -10.6 -3.56704 | gap 1, overlap 3889038 CGGCAAAGCCCCGGC CCTGCTCGCCCGCACGGGCAGCC TCGAT GGCGGCGT-TGAGGGCCAGCAGG TTGGTTTGCTCGGCA TERM 2991 3889234 - 3889211 - G 73 -13.2 -3.16564 | gap 1, opp_overlap 3889218 TGGCCAGGTTACGAA TGGCCG-TGCC GCT GGCATCGGCCA CCTGGCTACCTTGCT Pput_3482 3890456 - 3890770 + | XRE family transcriptional regulator TERM 2992 3891584 - 3891610 + G 80 -14.4 -3.17075 | GCATGATCGTGCGCC TGGCGCCGATCG GCG TGTTCGGCGCCA TTGCCTTCACCACCA Pput_3483 3890998 - 3892308 + | C4-dicarboxylate transporter DctA TERM 2993 3892434 - 3892395 - g 74 -4.8 -4.57569 | gap 1, overlap 3892397 TCAGTGGTGGAAAAA CTCCGCCAGGCC-CTGGCC CGC GGCCAATGGCGCACCGGCG ACATGCTGCCAGGCC TERM 2994 3892629 - 3892597 - g 85 -15.5 -3.53012 | CGTCGGGCGTGGAAA CCAGCGCAGCGGCCA GCC TGGCCGACGTGCTGG AACTGCGCTACACAC Pput_3484 3892353 - 3893051 + | GntR domain-containing protein Pput_3485 3893068 - 3893736 + | GntR family transcriptional regulator TERM 2995 3894623 - 3894599 - g 81 -9.9 -4.1899 | CCAGGCCAGCGAAAA GCTTGGCGCCA CCC TGGCCCCACGC GGTATCGCCAGTGCC Pput_3486 3893889 - 3894938 + | hypothetical protein Pput_3487 3895406 - 3894978 - | transmembrane pair domain-containing protein Pput_3488 3895507 - 3896385 + | LysR family transcriptional regulator TERM 2996 3898354 - 3898380 + G 70 -10 -3.55801 | overlap 3898364 GACCCTGCGCCATTG CGACCAGCTGGC CCA GCAGGCTGGGCG TTTGAAGCAGTTGGT Pput_3489 3896528 - 3898414 + | methyl-accepting chemotaxis sensory transducer TERM 2997 3898466 - 3898416 - T 74 -10.3 -3.68351 | gap 1, opp_overlap 3898415 3898416 3898419, overlap 3898417 GCTTCAGGATTTAAA CGCCGGGTTCAGGCGGCAAC-GGC CTAT GCCTGTTGTCGCCTGTACCAGCCC CTTATGCAGCCACCG TERM 2998 3898416 - 3898466 + T 73 -12.5 -2.57132 | gap 1, opp_overlap 3898416 3898417, overlap 3898415 3898419 GCTTCAGGATTTAAA CGCCGGGTTCAGGCGGCAAC-GGC CTAT GCCTGTTGTCGCCTGTACCAGCCC CTTATGCAGCCACCG TERM 2999 3898465 - 3898417 - T 76 -13.8 -2.80796 | gap 1, opp_overlap 3898416 3898415 3898419, overlap 3898416 CTTCAGGATTTAAAC GCCGGGTTCAGGCGGCAAC-GGC CTAT GCCTGTTGTCGCCTGTACCAGCC CCTTATGCAGCCACC Pput_3490 3899532 - 3898468 - | hypothetical protein Pput_3491 3900022 - 3899645 - | endoribonuclease L-PSP Pput_3492 3901171 - 3900035 - | FAD dependent oxidoreductase TERM 3000 3900724 - 3900710 - G 70 -10 -3.63837 | ATAACCCCGCAAGAA GCCTTG GTG CAAGGC ATGTACATCAAGGTC Pput_3493 3901287 - 3901880 + | XRE family transcriptional regulator Pput_3494 3902006 - 3902791 + | hypothetical protein Pput_3495 3903400 - 3902795 - | phosphoglycerate mutase TERM 3001 3903438 - 3903454 + r 90 -15.1 -3.65199 | GGTTGACTTGCGATT GGGCCGC AGA GCGGCCC TTTGGATCAGAAGTT Pput_3496 3905695 - 3903461 - | outer membrane receptor FepA TERM 3002 3904223 - 3904234 + g 70 -7.2 -4.07568 | overlap 3904222 AACCTTGTAGGCACG GGCG ATGC CGCC TTTTACCGACAGCGC Pput_3497 3906136 - 3907335 + | major facilitator transporter Pput_3498 3909406 - 3907559 - | ABC transporter TERM 3003 3909589 - 3909551 - H 100 -17.7 -3.85698 | gap 1, opp_overlap 3909558, overlap 3909553 3909558 TTTTTTGCCCACAAA GACAAAACCCCTACCTGC ATGT GCAGATAGGGGTTTTG-C GAAATGAATCTTGAC TERM 3004 3909588 - 3909553 - H 100 -21.4 -3.51934 | opp_overlap 3909558, overlap 3909551 3909558 TTTTGCCCACAAAGA CAAAACCCCTACCTGC ATGT GCAGATAGGGGTTTTG CGAAATGAATCTTGA TERM 3005 3909583 - 3909558 - H 100 -15.5 -4.84918 | opp_overlap 3909558, overlap 3909553 3909551 CCCACAAAGACAAAA CCCCTACCTGC ATGT GCAGATAGGGG TTTTGCGAAATGAAT TERM 3006 3909558 - 3909583 + H 95 -13.3 -4.09864 | opp_overlap 3909553 3909551 3909558 CCCACAAAGACAAAA CCCCTACCTGC ATGT GCAGATAGGGG TTTTGCGAAATGAAT TERM 3007 3912950 - 3912912 - H 79 -8.4 -4.41206 | opp_overlap 3912916 3912920 3912924, overlap 3912902 3912913 AACGATCTGACAAAA GTCAGAAATCAACATTCA ATA TGAATGTTCATTTCTAAG TTCTGACAACTTACT TERM 3008 3912949 - 3912913 - H 77 -11.9 -3.24 | opp_overlap 3912916 3912920 3912924, overlap 3912902 3912912 ACGATCTGACAAAAG TCAGAAATCAACATTCA ATA TGAATGTTCATTTCTAA GTTCTGACAACTTAC TERM 3009 3914816 - 3914868 + H 75 -13 -3.02902 | gap 1, opp_overlap 3914823 3914830, overlap 3914813 3914829 AACCCTAAACTTGGC TCAGCAATCTCAAATGACTATGTGA TTTC TCGCATGGTCACTTGTGA-TGCTGA TAATCTTTTTGACTA Pput_3499 3915252 - 3916139 + | hypothetical protein Pput_3500 3916319 - 3916206 - | hypothetical protein Pput_3501 3916332 - 3916613 + | hypothetical protein TERM 3010 3916639 - 3916620 - T 77 -10 -3.97308 | opp_overlap 3916620 TGTAAATAGAGTAAA GGGCAGCT CGTA AACTGCCC TTTTTCATCTGCGTT TERM 3011 3916620 - 3916639 + T 83 -7.8 -4.82154 | opp_overlap 3916620 TGTAAATAGAGTAAA GGGCAGCT CGTA AACTGCCC TTTTTCATCTGCGTT Pput_3502 3918461 - 3916653 - | peptidase M24 Pput_3503 3918682 - 3919800 + | hypothetical protein TERM 3012 3920011 - 3919987 - g 73 -6.3 -4.25104 | overlap 3920000 GCGCGGTCACGAAAA GACCGAAAGCC AAC GCCTCACGGTC ACCCGTGAACAAAAC Pput_3504 3919784 - 3920554 + | hypothetical protein Pput_3505 3920913 - 3920533 - | hypothetical protein Pput_3506 3921987 - 3920995 - | AraC family transcriptional regulator TERM 3013 3921451 - 3921436 - G 78 -6.8 -4.56597 | CGTCGCCCCCAAAAA GCGCTC CAGC AAGCGC AAGCCGAGGTCCGTC Pput_3507 3922070 - 3922618 + | isochorismatase hydrolase Pput_3508 3923230 - 3922667 - | XRE family transcriptional regulator Pput_3509 3923315 - 3924265 + | hypothetical protein TERM 3014 3924328 - 3924312 - f 86 -2.1 -5.61596 | opp_overlap 3924312 ACTGTTATAAAAAAA CCGCTTG TCA CAGCCGG TTTGTAGGATTCTGC Pput_3510 3924415 - 3927330 + | putative monovalent cation/H+ antiporter subunit A TERM 3015 3927333 - 3927308 - f 71 -4.7 -4.59853 | gap 1, overlap 3927312 GCAACCCGGCAAAAA CCAGCCAAGCAG GAG CCGCCTGA-TGG AAGAAGTGATTGCAG Pput_3511 3927330 - 3927674 + | putative monovalent cation/H+ antiporter subunit C Pput_3512 3927671 - 3929350 + | putative monovalent cation/H+ antiporter subunit D Pput_3513 3929347 - 3929835 + | putative monovalent cation/H+ antiporter subunit E Pput_3514 3929832 - 3930110 + | putative monovalent cation/H+ antiporter subunit F Pput_3515 3930107 - 3930472 + | putative monovalent cation/H+ antiporter subunit G Pput_3516 3930697 - 3930485 - | hypothetical protein Pput_3517 3931179 - 3930694 - | hypothetical protein Pput_3518 3931705 - 3931511 - | hypothetical protein TERM 3016 3931865 - 3931842 - R 84 -6.6 -4.86939 | CAAGAAACGCAAAAA GCCCCAGGAA TTGC TTCGAGGGGC TTGCACCACGCGCGG Pput_3519 3932347 - 3931883 - | TraR/DksA family transcriptional regulator TERM 3017 3933443 - 3933409 - g 78 -6.3 -4.56775 | opp_overlap 3933419, overlap 3933390 ACCTGGTCCGAAAAA GATCCAGGCTGCGCT GCAGG AGCGCTTCCCTGATC AGGCGCCGCCTTCTA Pput_3520 3933134 - 3934312 + | integrase catalytic subunit Pput_3521 3935389 - 3934616 - | enoyl-CoA hydratase/isomerase Pput_3522 3936530 - 3935403 - | acyl-CoA dehydrogenase domain-containing protein Pput_3523 3937732 - 3936539 - | acetyl-CoA acetyltransferase TERM 3018 3937066 - 3937088 + g 100 -12 -4.42238 | GTGCCTTGGGCGGCT GCTCGTCATC CTT GATGACGCGC TTTTCCTTGCCCTCG TERM 3019 3937316 - 3937339 + g 71 -8.8 -3.86015 | gap 1 GATGATCTTGCCGTG GCCCATG-CGG TAG CCGCCACGGGC TTTGTCCAGCAGGTA Pput_3524 3938511 - 3937744 - | short-chain dehydrogenase/reductase SDR Pput_3525 3940174 - 3938525 - | AMP-dependent synthetase and ligase Pput_3526 3944739 - 3940294 - | leucine-rich repeat-containing protein Pput_3527 3945908 - 3944886 - | helix-turn-helix domain-containing protein Pput_3528 3946972 - 3946109 - | LysR family transcriptional regulator TERM 3020 3947463 - 3947413 - g 77 -12.5 -3.5627 | overlap 3947404 ACAGCACCTTCGAAA CGGCC-GAAGACCAGCCGACCACGG CCG CCGACGTCGACCGG-CTGCTGGCCG AAGACTCGGCCATCA TERM 3021 3947730 - 3947708 - g 100 -4.1 -5.40072 | gap 1, overlap 3947709 CTTCGCCGAAAAAAA CGCCCT-GGC GGCT GCCGAAGGCA ATGCCCACTCGCTGG Pput_3529 3947085 - 3948191 + | 2-aminoethylphosphonate--pyruvate transaminase Pput_3530 3948226 - 3949053 + | phosphonoacetaldehyde hydrolase Pput_3531 3950346 - 3949282 - | hypothetical protein Pput_3532 3950480 - 3951814 + | peptidase U32 TERM 3022 3952233 - 3952250 + F 71 -4.7 -4.57569 | CCAGACCCGCCTTGT CGCCGGT ATCC GCCTGCG TTTTTAAAGGAGTGC TERM 3023 3952502 - 3952458 - g 93 -17.7 -3.33815 | overlap 3952444 AGCGCCGTCAAGCAA CGCCTCGGCGTGGCGCCACGC CTA GCGTCGTGCCACACCGGGGTG ATCGACGGCAAGTTC Pput_3534 3952272 - 3952700 + | hypothetical protein TERM 3024 3952714 - 3952732 + G 78 -11.7 -3.72576 | GATGCTCAGCCTGGG GGCGCTG TTTCT CAGCGCC TTTGGTGCCGCCACC Pput_3535 3952700 - 3953137 + | hypothetical protein Pput_3536 3953213 - 3954211 + | alpha/beta hydrolase fold Pput_3537 3954865 - 3954284 - | DinB family protein Pput_3538 3955985 - 3954879 - | AFG1 family ATPase Pput_3539 3957173 - 3956028 - | glucose sorbosone dehydrogenase Pput_3540 3957513 - 3957196 - | hypothetical protein Pput_3541 3958634 - 3957669 - | agmatinase Pput_3542 3959739 - 3958660 - | extracellular solute-binding protein Pput_3543 3959776 - 3960732 + | LysR family transcriptional regulator Pput_3544 3963647 - 3961221 - | TonB-dependent siderophore receptor TERM 3025 3961665 - 3961678 + g 74 -5.2 -4.55023 | opp_overlap 3961665, overlap 3961674 CAGTGCACCTTCAAA GCCG AAGTCG CGGC TTTTCTGCTCTTCCA TERM 3026 3962872 - 3962886 + g 80 -5.6 -4.72986 | overlap 3962865 3962869 GTCTCGAAGCGCGCC GGGCCA GGC TCGCCC TTTTTGGTCACGATG Pput_3545 3964999 - 3963875 - | anti-FecI sigma factor, FecR TERM 3027 3965380 - 3965364 - g 76 -13.7 -3.18199 | opp_overlap 3965363 GAACCTGGAAGTGAA CGGCCAG CCG CTGGCCG CTGGTGTCAGTGACC Pput_3546 3965131 - 3965610 + | water stress/hypersensitive response protein Pput_3547 3965894 - 3965631 - | hypothetical protein TERM 3028 3966051 - 3966039 - g 91 -9.1 -4.57073 | overlap 3966041 CATGGCCCGGAAAAA CGCCA CGC TGGCG GACAGCGATCAGATC Pput_3548 3965917 - 3966345 + | protein of unknown function DUF883, ElaB TERM 3029 3966383 - 3966346 - T 74 -11.9 -3.05384 | overlap 3966382 GGTCGGCGCAGTTAA GGCCTGCGCCGCCTGGT GCAC ATCAGGCGGCCAAAGCC TGCGGGATGCCGCTG Pput_3549 3966985 - 3966368 - | tRNA--hydroxylase TERM 3030 3966497 - 3966532 + g 72 -11.8 -3.36823 | TTCATCACCGTAGTT GTGCGCCAGTTTCAGG TAGC CCTGGTAGTGGCGCGC TTCGCTTTTCAGCAG Pput_3550 3967140 - 3968003 + | UspA domain-containing protein Pput_3551 3968320 - 3968117 - | hypothetical protein Pput_3552 3971199 - 3968317 - | formate dehydrogenase, alpha subunit TERM 3031 3968620 - 3968636 + g 70 -10.1 -3.57792 | GCCGACCCAGTCACC GTCGTGG ATG CCACGGC TTTCCGCGTCGGTCG Pput_3553 3972755 - 3971196 - | NADH dehydrogenase (quinone) TERM 3032 3971545 - 3971515 - G 75 -14.6 -2.82516 | overlap 3971497 TCGGCCACCACCACA CCGCCGTGGCCGAG CAT CGCGCCCACGGCAG CAAACGCTTCATAGT Pput_3554 3973231 - 3972749 - | formate dehydrogenase subunit gamma TERM 3033 3973596 - 3973548 - R 81 -13.8 -3.27525 | gap 1 GCCCTCGAAACCGAA CCTGGTCCATTGCCGGGCCTGCC AGAC GGCAGCCCCGGCAATGGGCT-GC CATCCAGCATGGCTA Pput_3555 3974154 - 3973633 - | ProQ activator of osmoprotectant transporter ProP Pput_3556 3974831 - 3974277 - | XRE family transcriptional regulator TERM 3034 3974953 - 3974970 + r 78 -12.7 -3.2614 | GGCGGCACTGATCGA GCACCGC GCAG GCGGTGC TTGATCTCACAGGTG Pput_3557 3976373 - 3975015 - | putative aminotransferase Pput_3558 3977216 - 3976443 - | peptidase C26 TERM 3035 3977288 - 3977270 - R 78 -14.6 -2.71097 | overlap 3977267 3977266 AACGGTAGAAAGGGA GGTGCAGC GTC GCTGCACC TAGAGGAACCAGCGG Pput_3559 3978634 - 3977288 - | glutamine synthetase, catalytic region Pput_3560 3979216 - 3978662 - | XRE family transcriptional regulator TERM 3036 3979348 - 3979363 + H 79 -8.2 -4.41348 | CAGCGTGGCGGATTG CCTGCG GTGG CGCGGG TTTCTTTACAGGCGC Pput_3561 3979430 - 3980323 + | LysR family transcriptional regulator TERM 3037 3980454 - 3980438 - g 75 -2.9 -4.91511 | overlap 3980440 ATGTCAGTAGAAAAA GTTGCGA TCA TCACAGC AGGTGGCAGTGGTAT Pput_3562 3980423 - 3981127 + | short-chain dehydrogenase/reductase SDR Pput_3563 3981209 - 3981601 + | glutathione-dependent formaldehyde-activating, GFA Pput_3564 3981738 - 3982577 + | AraC family transcriptional regulator Pput_3565 3983623 - 3982649 - | hypothetical protein Pput_3566 3984183 - 3983620 - | TetR family transcriptional regulator TERM 3038 3984261 - 3984234 - R 70 -11.4 -3.04461 | overlap 3984253 TACTGACCGGTAAGA TTCAGGCCGCAT CCAG ATACGACCTGAA GCATGGCCGCTACGA TERM 3039 3984540 - 3984510 - R 100 -19.8 -5.07652 | GCCTCCAAAACAAAA CACCCTGCGAAAGC TTA GCCCTCGCAGGGTG TGGGGGTGACCCGTT TERM 3040 3984562 - 3984579 + r 77 -10.5 -3.73224 | TGACCCGTTCATTTA GCCCGGC CTAC GCTGGGC TTTCGTGCACGCTAA Pput_3567 3985071 - 3984622 - | hypothetical protein Pput_3568 3985347 - 3985258 - | hypothetical protein Pput_3569 3985541 - 3986167 + | lysine exporter protein LysE/YggA TERM 3041 3986184 - 3986206 + T 71 -12 -2.84051 | opp_overlap 3986182 3986181, overlap 3986183 AAGCAGGAGAAAGCG GCGGGGCT GCGTATG AGCCCCGC GTTTCATCACGATGC Pput_3570 3986521 - 3986213 - | chorismate mutase TERM 3042 3986732 - 3986752 + G 73 -3.2 -4.79352 | gap 1, overlap 3986733 TCGCAATCTGTGCAG GCCCCT-CC AGCA GGCAGGGGA TTTTCTTGTCAATGG Pput_3571 3986663 - 3987619 + | PDZ/DHR/GLGF domain-containing protein TERM 3043 3988211 - 3988235 + F 79 -10 -4.0641 | TAGTTGTTCTGCGTC GCTTGGTCTC GCCCA GAGGCCGAGC TTTCTCTGCCTCCAC TERM 3044 3988427 - 3988455 + F 79 -7.4 -4.63542 | gap 1 GATAAATGCGGATCT GGACGA-GGTAGC CAGT GCTGCCATCGGCC TTTTTACGCGTTCTG Pput_3573 3988562 - 3989572 + | tRNA-dihydrouridine synthase A TERM 3045 3990190 - 3990223 + G 85 -5.7 -4.98531 | CCTGCTGTTCTCCTT CGCCCAGGCCCAGGC TTGC GCCGATGCCGGGGTG TTTTTGATTTCGCCG Pput_3574 3989729 - 3990655 + | transaldolase B TERM 3046 3990676 - 3990706 + F 100 -12.6 -4.86731 | TTCGGGTTTGCCTGA CGGGCGGGAAGTGT TCA GTATTTTCCGCCCG TTTTGTTTGCCACGC TERM 3047 3991713 - 3991750 + G 75 -14.9 -2.73875 | overlap 3991709 TGCCGACAATCTCGG TCAGGTGGCGCGGGTGA TGGC TCACCTGCCCTGCCTGA TGATCTTCGACGACC Pput_3575 3990835 - 3992688 + | hypothetical protein Pput_3576 3993316 - 3992834 - | anti-sigma-factor antagonist Pput_3577 3994494 - 3993313 - | response regulator receiver protein TERM 3048 3993416 - 3993444 + g 91 -12.4 -4.27843 | TCCAGACTGCCACCT GCTGCCTTGACG ATCTC CGGCAAGGCGGC TTCTTTATCTTTGAG TERM 3049 3994813 - 3994798 - g 72 -2.5 -4.71061 | overlap 3994799 AGCCATAGCGAAAAA CGCGA CTTCAT TCGCA TGCGCATCGACACCG TERM 3050 3994906 - 3994917 + G 70 -7.2 -3.98214 | GGCATGCAGGTGCAG GCGC CGCA GCGC TTTCTGGTGGGTGAT Pput_3578 3994765 - 3995064 + | type IV pilus assembly PilZ Pput_3579 3995806 - 3995099 - | VacJ family lipoprotein Pput_3580 3996008 - 3996571 + | hypothetical protein Pput_3581 3996694 - 3996957 + | hypothetical protein TERM 3051 3996988 - 3996960 - T 72 -10.1 -3.60296 | opp_overlap 3996961 3996963 3996964, overlap 3996962 3996963 CATGGGGATCTGAAA GAGCGGGGGCCGC AAA GCGGCCCCCTGTA TTACTGCCGTACCAG TERM 3052 3996961 - 3996988 + T 71 -11.2 -3.16564 | gap 1, opp_overlap 3996960 3996962 3996963, overlap 3996963 3996964 ATGGGGATCTGAAAG AGC-GGGGGCCGC AAA GCGGCCCCCTGTA TTACTGCCGTACCAG TERM 3053 3996986 - 3996962 - T 79 -12.7 -3.38046 | opp_overlap 3996961 3996963 3996964, overlap 3996960 3996963 TGGGGATCTGAAAGA GCGGGGGCCGC AAA GCGGCCCCCTG TATTACTGCCGTACC TERM 3054 3996985 - 3996963 - T 82 -16.2 -2.62613 | opp_overlap 3996963 3996961 3996964, overlap 3996962 3996960 GGGGATCTGAAAGAG CGGGGGCCGC AAA GCGGCCCCCT GTATTACTGCCGTAC TERM 3055 3996963 - 3996986 + T 85 -16 -3.14602 | gap 1, opp_overlap 3996962 3996960 3996963, overlap 3996961 3996964 GGGGATCTGAAAGAG C-GGGGGCCGC AAA GCGGCCCCCTG TATTACTGCCGTACC TERM 3056 3996964 - 3996984 + T 100 -19.7 -3.13371 | opp_overlap 3996963 3996962 3996960, overlap 3996963 3996961 GGGATCTGAAAGAGC GGGGGCCGC AAA GCGGCCCCC TGTATTACTGCCGTA queF 3997819 - 3996989 - | 7-cyano-7-deazaguanine reductase TERM 3057 3997458 - 3997483 + g 72 -3.9 -4.57569 | gap 1, overlap 3997456 ACCTTCACCCCCACC GGCTTG-CCGGC AGC GGCGGACAGGTC TTTTTCCAGGCATGC Pput_3583 3998415 - 3997888 - | hypothetical protein Pput_3584 3998617 - 3999297 + | two component heavy metal response transcriptional regulator TERM 3058 4000332 - 4000369 + G 82 -11.2 -4.07568 | GACCAGCATATGCTG CGCCGGGCGCTGTCCA ACCTGC TGGACAACGCCATGCG TTTTACCCCGGCAGG Pput_3585 3999297 - 4000646 + | heavy metal sensor signal transduction histidine kinase Pput_3586 4001927 - 4000686 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 3059 4001979 - 4001958 - R 91 -11.5 -4.49756 | GTGGAAACAGGAAAA CGGGGCAGC ACCT GCCACCCCG GCAGTCGATCAGATG TERM 3060 4002009 - 4001993 - R 71 -12.3 -2.79796 | CGGCAGTCGATCAGA TGGCCAC CAG GTGGCCA TCGTCGAGCTTCAGC Pput_3587 4002686 - 4001988 - | lipoprotein releasing system, ATP-binding protein Pput_3588 4003929 - 4002679 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 3061 4004583 - 4004527 - g 75 -14.6 -2.72463 | overlap 4004530 4004563 4004569 ACCGATGCCCAACGA CAACTGCTGGCG-CGTTACATCCTGCAG CGC CAGCAACA-GCAACGGCGCCAGCAGCTG GAACTGAACGACCCC TERM 3062 4004580 - 4004530 - g 76 -12.7 -3.51329 | overlap 4004527 4004563 4004569 GATGCCCAACGACAA CTGCTGGCG-CGTTACATCCTGCAG CGC CAGCAACA-GCAACGGCGCCAGCAG CTGGAACTGAACGAC Pput_3589 4004023 - 4004607 + | type IV pilus assembly PilZ TERM 3063 4004977 - 4004967 - g 76 -8.2 -4.14511 | overlap 4004968 AACTGGAGGTGAAAA GCGC CTC GCGC ACCCGCGCGGCCACC TERM 3064 4005260 - 4005295 + G 91 -15.4 -3.83026 | opp_overlap 4005268 GTGTCGGTGTGGACG GTCAACGAGCCGGCAC TGAT GCGCCGGCTTGCTGAC TTTGGTGTGGACAGC Pput_3590 4004639 - 4005355 + | glycerophosphoryl diester phosphodiesterase Pput_3591 4006798 - 4005404 - | soluble pyridine nucleotide transhydrogenase TERM 3065 4006846 - 4006816 - R 70 -11.8 -2.57564 | overlap 4006815 4006830 GTACTCCTTCAGAAC TGGCCCGCAAGCCA CGG TCGCTCGCGGGGCA CGATCATGCCGCCGG Pput_3592 4008001 - 4007003 - | ApbE family lipoprotein TERM 3066 4008046 - 4008085 + r 100 -18.7 -3.53012 | opp_overlap 4008046 CTCTTCGCGGGTAAA CCCGCGCCTACAGGG GCAGCGATAA TCCTGTAGGCGCGGG TTTACCCGCGAAAGG TERM 3067 4008085 - 4008046 - R 100 -18.6 -3.53012 | opp_overlap 4008046 CTCTTCGCGGGTAAA CCCGCGCCTACAGGGGCA GCGA TAATCCTGTAGGCGCGGG TTTACCCGCGAAAGG TERM 3068 4008137 - 4008156 + r 100 -13.6 -5.29385 | opp_overlap 4008137 TCAGAATAAAAAAAA CGGGAACC CGAA GGTTCCCG TTTTTTCATTGCCTT TERM 3069 4008156 - 4008137 - R 100 -13.6 -6.17268 | opp_overlap 4008137 TCAGAATAAAAAAAA CGGGAACC CGAA GGTTCCCG TTTTTTCATTGCCTT Pput_3593 4009644 - 4008181 - | glyceraldehyde-3-phosphate dehydrogenase TERM 3070 4009260 - 4009282 + g 75 -13.4 -3.01712 | GCGCCGAAGCGTTCT GCTGACCGAC CAC GTCGGCCAGC TCTTCACGGACGAAC TERM 3071 4009681 - 4009661 - H 91 -6.7 -5.38047 | TAGGGACAGAAAAAA GGGGCTACA TTA TGACGCCCC AACGCGGAACCGGCA TERM 3072 4010157 - 4010173 + G 81 -7.9 -4.46212 | ACCACCGCCCTGCAC CGCCTGG CAC CCACGCG TTTTCTGCTGGGCAG TERM 3073 4011337 - 4011319 - g 75 -12.4 -3.55444 | opp_overlap 4011318 TGGCCACGCTGGAAA TCGACGGC CAG GCCGCCGA ATTCCTGACGCTGGA TERM 3074 4011767 - 4011726 - g 80 -14.4 -3.1855 | gap 1 TTCGGCAAGACTGAA GTGGCCA-TGCGCGCGGCG TTCAT CGCCGTGCACAGTGGCCGC CAGGTGGCCGTACTG TERM 3075 4012348 - 4012290 - g 72 -2.4 -4.7329 | gap 4, overlap 4012291 AAAACCATCGAAAAA TGCGCCGCCGACCTTGCCGA-GCTGGTGCC CGA GGCAC--GCATCGGCATCGGCCACGG-GCA AATGCGCGAACGCGA Pput_3594 4009812 - 4013261 + | transcription-repair coupling factor Pput_3595 4013271 - 4013843 + | hypothetical protein TERM 3076 4013923 - 4013911 - g 71 -9.1 -3.737 | CAATCGTTCAGCAAA GCTGC CCT GCAGC GCGGTGAGCGCTATG TERM 3077 4015047 - 4015020 - g 71 -6.2 -4.2828 | gap 1 CGGCACCGACGAAAA GCCGCTGACCCGC CTG GCAGG-CAGCACC AGCCAGCGCATTCGC TERM 3078 4017069 - 4017054 - g 71 -6 -4.30576 | GTTGCAGCAGGAAAA GGCTGC ATTG GCGGCC AGCCTGCTGGACGGC Pput_3596 4013848 - 4017165 + | non-specific serine/threonine protein kinase Pput_3597 4018576 - 4017566 - | beta-hexosaminidase TERM 3079 4018006 - 4017983 - G 70 -10.2 -3.54543 | opp_overlap 4017983 ACTCAGGCGGGTAAA CGGCACCAGG TCGG CCTGGCGCAG TTGTTCCAGGCTGCG Pput_3598 4019461 - 4018754 - | TetR family transcriptional regulator Pput_3599 4019676 - 4020284 + | LexA repressor TERM 3080 4020787 - 4020748 - g 100 -22.4 -2.64274 | opp_overlap 4020752, overlap 4020752 AGCGCCGGAAACGCA CAAAGCCTGAACATCCGC CTCG GCTGATGTTCAGGCTTTG CCTGTCACTTCAAAT Pput_3600 4020298 - 4020774 + | SOS-response cell division inhibitor blocks FtsZ ring formation-like protein TERM 3081 4020752 - 4020783 + T 100 -17.4 -3.72588 | opp_overlap 4020748 4020752 CCGGAAACGCACAAA GCCTGAACATCCGC CTCG GCTGATGTTCAGGC TTTGCCTGTCACTTC TERM 3082 4020783 - 4020752 - T 100 -17.4 -4.02132 | opp_overlap 4020752, overlap 4020748 CCGGAAACGCACAAA GCCTGAACATCCGC CTCG GCTGATGTTCAGGC TTTGCCTGTCACTTC Pput_3601 4021058 - 4020825 - | hypothetical protein Pput_3602 4021798 - 4021109 - | hypothetical protein TERM 3083 4021512 - 4021539 + g 72 -7.6 -4.183 | opp_overlap 4021516, overlap 4021513 TCGCGCTCAGCCTGA ACCAGGCCTTGG GCAT TCATGGCCTGGC TTTGTTCAGCCTTGG Pput_3603 4024423 - 4021814 - | DNA topoisomerase I TERM 3084 4022925 - 4022942 + g 84 -8.3 -4.39318 | overlap 4022909 4022927 GCCGCGTAGGTCGAT GGGCGGC CAAT GCCGCGC TTTTCCATTTCCTTG TERM 3085 4023484 - 4023495 + g 72 -4.4 -4.63218 | CGTACAAGCGCTGGG CCAT CATC ATGG TTTTCTTCACACCGA TERM 3086 4024477 - 4024458 - R 88 -4.2 -5.47159 | overlap 4024459 TCTGAAGATAAAAAA CGCGCC AAGTGCCA GACGCG GCACCGCTATATATA Pput_3604 4024775 - 4024524 - | hypothetical protein TERM 3087 4024831 - 4024813 - R 100 -13.1 -5.42198 | opp_overlap 4024812 CCTGAAAAAACAAAA CCGGGGC ACTAG GCCCCGG CTGCTGTCCCGCTAC fadA 4026026 - 4024851 - | 3-ketoacyl-CoA thiolase fadB 4028205 - 4026058 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3088 4028589 - 4028601 + r 72 -6.2 -4.36914 | opp_overlap 4028586, overlap 4028586 TTGAATGAATAACCC GGCC TGCCT GGCC TTTTCTGCGCAGCAG TERM 3089 4028671 - 4028625 - R 71 -9.3 -3.82083 | gap 1, opp_overlap 4028621 4028625, overlap 4028620 GCAGCAGAACGCAAA GCGGCGACTTGGCACCCCACCC CTTC AGG-GTTATGCCGAGCCGCCGC TTTGTCGTTACAGAA Pput_3607 4029254 - 4028817 - | hypothetical protein Pput_3608 4029365 - 4029805 + | UspA domain-containing protein TERM 3090 4029837 - 4029876 + T 78 -12.1 -3.53012 | overlap 4029838 CTCTTCGCGGGCCAG CCCGCGCCTGCAAGGGT ATGGCA ATCCCTGCAGGTGCGGC TTTACCCGCGAAGAG TERM 3091 4029838 - 4029875 + T 82 -15.6 -2.71712 | overlap 4029837 TCTTCGCGGGCCAGC CCGCGCCTGCAAGGGT ATGGCA ATCCCTGCAGGTGCGG CTTTACCCGCGAAGA Pput_3609 4031841 - 4029913 - | ABC transporter related TERM 3092 4030104 - 4030123 + g 93 -7.2 -5.06414 | gap 1 GCATCTCCAGTTCAC GCTGCAGCT TGT AGCT-CAGC TTTTTCTTCGAAGCG TERM 3093 4031473 - 4031493 + g 74 -4.7 -4.62302 | overlap 4031459 GTCGCGGGCCTCCAG CTCGTGC TGGACGT GCATGAG TTTTTCCAGGTCTTC Pput_3610 4032038 - 4033987 + | lytic transglycosylase, catalytic Pput_3611 4034902 - 4034099 - | MOSC domain-containing protein Pput_3612 4035893 - 4034958 - | putative CheW protein Pput_3613 4036242 - 4036754 + | putative CheA signal transduction histidine kinase TERM 3094 4036910 - 4036892 - f 71 -8.8 -3.74251 | TACAGGGCGATTAAA GGGTGGCA CTT TGCTACCC GAAAGGGCCCGACCA TERM 3095 4037807 - 4037824 + G 73 -11.3 -3.55444 | GCTGGCGTTGTCGAT CCACGAC GATG GTCGTGG TTTCGCCCCTGCCCG Pput_3614 4037121 - 4038017 + | integral membrane sensor signal transduction histidine kinase Pput_3615 4038007 - 4038666 + | two component LuxR family transcriptional regulator TERM 3096 4038662 - 4038647 - T 77 -3.3 -5.0538 | overlap 4038650 CCGTACGCGAAAAAA TCATC AGCCTG GATGA CTGAGCAACGGCGAC Pput_3616 4039537 - 4038650 - | lipid kinase TERM 3097 4039642 - 4039615 - H 82 -6.3 -5.00884 | gap 1, opp_overlap 4039620 4039622 ATGCCCTGGAAAAAA CAGTGTGCCGGC GCCAG GCCTGCA-ACTG GTCACGTCGCCGGTC TERM 3098 4039620 - 4039658 + H 79 -3.7 -5.0133 | gap 2, opp_overlap 4039615, overlap 4039622 CTGGAAAAAACAGTG TG-CCGGCG-CCAGGCCTG CAA CTGGTCACGTCGCCGGTCA TTTTTTCCACACCTG TERM 3099 4039716 - 4039756 + H 70 -5.2 -4.39166 | CCCTATTGCCATGGA CGCGCCCGGCAGTGGC TCCCCCACT GCTGCCAACGGGCGCG TTTTGCTATCTGCAG TERM 3100 4040176 - 4040166 - g 74 -4.6 -4.57073 | overlap 4040167 4040168 CAGCCGTTCGAAAAA GCCC TGC AGGC TCGCAGGCTGCCCTA Pput_3617 4039794 - 4041041 + | glycosyl transferase, group 1 Pput_3618 4042247 - 4041030 - | molybdenum cofactor synthesis domain-containing protein TERM 3101 4041609 - 4041627 + g 74 -13.2 -3.39327 | overlap 4041609 CTGCAACCAGCTGAC CAGCAACC TGC GGTTGCTG TTGTAGATCTGCCCA TERM 3102 4042045 - 4041998 - G 100 -20.1 -4.07885 | overlap 4042000 CATGGCCGGCGAAAA TACGC-TGGCTGACCGGCAGCGG CTGG CC-CTGCCAGTCAGCCAGGCGCA AGGCATAACCGTCCA TERM 3103 4042043 - 4042000 - G 100 -20.5 -3.63744 | overlap 4041998 TGGCCGGCGAAAATA CGC-TGGCTGACCGGCAGCGG CTGG CC-CTGCCAGTCAGCCAGGCG CAAGGCATAACCGTC Pput_3619 4042779 - 4042240 - | molybdenum cofactor biosynthesis protein B Pput_3620 4042967 - 4043188 + | hypothetical protein TERM 3104 4043355 - 4043383 + T 95 -17.6 -3.48395 | opp_overlap 4043361, overlap 4043361 CGACCAAATCCTTGT CAAAAAGCCCGC CTTGC GCGGGCTTTTTG TTGTGTGCGAAAAAT TERM 3105 4043361 - 4043377 + T 100 -10.8 -5.24796 | opp_overlap 4043361, overlap 4043355 AATCCTTGTCAAAAA GCCCGC CTTGC GCGGGC TTTTTGTTGTGTGCG TERM 3106 4043377 - 4043361 - T 93 -10.8 -4.57341 | opp_overlap 4043361 4043355 AATCCTTGTCAAAAA GCCCGC CTTGC GCGGGC TTTTTGTTGTGTGCG Pput_3621 4045120 - 4043453 - | methyl-accepting chemotaxis sensory transducer TERM 3107 4043526 - 4043499 - G 76 -10.5 -3.86194 | opp_overlap 4043499 4043524 AACTGCCCTGACAAA CCATGCAGGCG CTGCCC CGCCTGCTCGG TATGCTGCACCGCTT TERM 3108 4044004 - 4044018 + g 73 -11.4 -3.60792 | opp_overlap 4044001 GATCGCGAATGACCG TCGCCG TGC CGGCGA TTTCGCGGTTGACCG TERM 3109 4045162 - 4045141 - R 100 -10.9 -5.78622 | GCAGGCCAAAAAAAA GCTGCCATC ACGC AATGGCAGC CAGGTCGAGCACTTA Pput_3622 4047004 - 4045241 - | lipid ABC transporter ATPase/inner membrane protein TERM 3110 4046675 - 4046664 - G 85 -5.8 -5.00616 | TTGTCTTCGAAAAAA CCTG GGTG CAGG CCGATCAGGTGATCG Pput_3623 4047215 - 4047388 + | hypothetical protein TERM 3111 4047407 - 4047424 + T 100 -14.1 -5.06414 | GCGAATTCTTTGCAA CCCGGCG CTTG CGCCGGG TTTTTATTGGCCCAG Pput_3624 4048645 - 4047503 - | erythronate-4-phosphate dehydrogenase Pput_3625 4048948 - 4048706 - | cell developmental protein SirA TERM 3112 4049475 - 4049454 - R 71 -4.4 -4.56597 | TTGTCGTGGCAAAAA GGAACCAA AAACCG TCGGCTCC CATCATCCGGCCCCT Pput_3626 4050805 - 4049741 - | putative RNA 2'-O-ribose methyltransferase acnA 4051030 - 4053771 + | aconitate hydratase TERM 3113 4053811 - 4053836 + F 88 -18.3 -2.78384 | GTTCCGCTCTCTAGA CCGAGCGCTGC GCGG GCGGCGCTCGG TCTCCTACACGCCAA Pput_3628 4054022 - 4055587 + | methyl-accepting chemotaxis sensory transducer Pput_3629 4056729 - 4055824 - | pseudouridine synthase Pput_3630 4057068 - 4056760 - | hypothetical protein Pput_3631 4057565 - 4057134 - | peptidase M15A Pput_3632 4057913 - 4057674 - | glutaredoxin 2 Pput_3633 4059195 - 4057987 - | Rh family protein/ammonium transporter TERM 3114 4058344 - 4058308 - G 73 -8.5 -4.0492 | overlap 4058310 4058312 GAAGGTCCAGACAAA CAGAGCGCCGGCCACCA GGC CGGTGGCGAGCGCACCC ACCGGGTGCATCAGA TERM 3115 4058342 - 4058310 - G 77 -13.3 -3.615 | overlap 4058308 4058312 AGGTCCAGACAAACA GAGCGCCGGCCACCA GGC CGGTGGCGAGCGCAC CCACCGGGTGCATCA TERM 3116 4058340 - 4058312 - G 82 -14.5 -3.38294 | overlap 4058310 4058308 GTCCAGACAAACAGA GCGCCGGCCACCA GGC CGGTGGCGAGCGC ACCCACCGGGTGCAT TERM 3117 4058433 - 4058414 - G 74 -5.6 -4.42386 | gap 1, overlap 4058415 CCGTTATGCAGAAAA CCCGGGTCG TTG CG-CCCGGC CAGCAACGCCGACAG TERM 3118 4059763 - 4059753 - g 79 -8.2 -4.26076 | GTACGTGCAGGAAAA CCCG TGG CGGG CAATCGGCATCGCGG Pput_3634 4059508 - 4059822 + | protein of unknown function DUF883, ElaB Pput_3635 4059832 - 4060206 + | hypothetical protein Pput_3636 4060203 - 4060532 + | hypothetical protein Pput_3637 4060590 - 4062008 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 3119 4062053 - 4062011 - f 90 -14.9 -3.60296 | overlap 4062012 CAGCCCGACCTGAAA CGCGTCGGTGCAGCG-CGGGC TCG GCCAGGCGCTGCACC-ACGCT TGCAGGAAACTTCCT TERM 3120 4062052 - 4062012 - f 88 -18.4 -2.75963 | overlap 4062011 AGCCCGACCTGAAAC GCGTCGGTGCAGCG-CGGGC TCG GCCAGGCGCTGCACC-ACGC TTGCAGGAAACTTCC Pput_3638 4062291 - 4062908 + | two component LuxR family transcriptional regulator TERM 3121 4063613 - 4063645 + G 71 -12.7 -3.05463 | opp_overlap 4063619 4063621, overlap 4063620 4063621 CGCATGGCCAACTTC GGCAAACACGAGGCC ATC GGCTTCGGTTTTGCC TTGCGTCAGCAAGAT TERM 3122 4063620 - 4063638 + G 73 -6.6 -4.28774 | opp_overlap 4063619 4063621, overlap 4063613 4063621 CCAACTTCGGCAAAC ACGAGGCC ATC GGCTTCGG TTTTGCCTTGCGTCA Pput_3639 4062917 - 4066549 + | PAS/PAC sensor hybrid histidine kinase Pput_3640 4066591 - 4066935 + | hypothetical protein TERM 3123 4066975 - 4066995 + F 100 -14 -5.07486 | opp_overlap 4066975 GTTGATTGCTGAAAA GGCCACCC CATTC GGGTGGCC TTTTTATTGGCGATG TERM 3124 4066995 - 4066975 - f 100 -14 -4.09685 | opp_overlap 4066975 GTTGATTGCTGAAAA GGCCACCC CATTC GGGTGGCC TTTTTATTGGCGATG TERM 3125 4067546 - 4067590 + G 71 -9.2 -3.72576 | gap 1 TGACCTGCGCGCCAA TGGCGTGCGCACCGTCACCGG TGAC CTGGTGCTGGACCGCA-GCCA TTTCGTGCAACCCAA TERM 3126 4067830 - 4067799 - g 71 -5.1 -4.42806 | gap 1, overlap 4067800 4067822 GTAGCCTCAAAGAAA TGCACCGGTGATGT GCGCT ACAAC-CCGGTGCC CCAGGCCGACGGCAT Pput_3641 4067136 - 4068590 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 3127 4068626 - 4068680 + T 87 -12.3 -4.07568 | gap 2 TTTTCGCGGGTGAAC CCGCTCCTACAGGGGTGAGCACGGCTT ACC AAACC-TGTGCAAC-CTGTAGGAGCGG TTTTCGCCGCGAAAG Pput_3642 4071111 - 4068721 - | diguanylate cyclase with PAS/PAC sensor TERM 3128 4070906 - 4070861 - G 91 -9 -4.56775 | gap 1, opp_overlap 4070869 4070871, overlap 4070862 4070866 ATGTCGTTGGAAAAA CTGAAGAACCGCCGCAGC-CC ATCCA GGCGCTGCTGCTGTTCGTCAA AGCGCTCGGCAATAC Pput_3643 4073443 - 4071206 - | 23S rRNA m(2)G2445 methyltransferase TERM 3129 4073441 - 4073455 + g 70 -10 -3.57263 | overlap 4073428 4073428 ACTGACGGGGCGACG CATCGC CCC GCGATG TTTGCCCGTACACCT TERM 3130 4073832 - 4073855 + H 77 -11 -3.59979 | gap 1, opp_overlap 4073848, overlap 4073832 ATAGAACTGGTCTTA G-GCCGCTTCG CAA CGAGGCGGCAC TTTCAGCTCGCCACG Pput_3644 4073961 - 4074176 + | ribosome modulation factor TERM 3131 4074238 - 4074256 + T 100 -16 -5.31456 | CGGGCGAAGGCCCAG GGGCCCCT TGA AGGGGCCC TTTTTTATGCCTTGG Pput_3645 4075449 - 4074340 - | dihydroorotate dehydrogenase 2 TERM 3132 4074669 - 4074686 + g 71 -5.5 -4.258 | overlap 4074667 4074681 CCGACGCCATCAGCG CGGCG GCCACCAG CGCCG TTTCTTCGTCGCTCA TERM 3133 4076132 - 4076112 - g 84 -11.1 -4.1552 | GACGCCGTGAACAAA GGCCAAGGC TTC ACCCTGGCC ACCAGCCAGTCGATC TERM 3134 4076588 - 4076566 - g 77 -14.9 -2.87931 | opp_overlap 4076558 GCGAGGCCGCACAGA GCCTGGGCA TCGCT TGCCCAGGC CAACCGATGCGTAGC Pput_3646 4075500 - 4076714 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Pput_3647 4076726 - 4077301 + | response regulator receiver/ANTAR domain-containing protein TERM 3135 4077399 - 4077456 + F 100 -20 -3.25072 | opp_overlap 4077406, overlap 4077406 ACCCCACTTGAATCC CGACAAAGACGTCGCTCTCCCCTCCA CACCCA TGGAGCGGGTAGCGGCGTCTTTTTCG TTCCGTTGTACTACC TERM 3136 4077449 - 4077406 - f 83 -11.6 -3.89614 | opp_overlap 4077399 4077406 TTGAATCCCGACAAA GACGTCGCTCTCCCCTCCAC ACCC ATGGAGCGGGTAGCGGCGTC TTTTTCGTTCCGTTG TERM 3137 4077406 - 4077449 + F 100 -15.3 -4.90013 | opp_overlap 4077406, overlap 4077399 TTGAATCCCGACAAA GACGTCGCTCTCCCCTCCA CACCCA TGGAGCGGGTAGCGGCGTC TTTTTCGTTCCGTTG TERM 3138 4078256 - 4078297 + G 76 -9.4 -4.08767 | gap 3 CGCTTGCGTGTTCGC CGG-CAGCCTGATGCGCCCGC TCG GCG-GCGCC-CTGGCTGACCG TTTTGGCGGCATCCG Pput_3648 4077486 - 4078697 + | nitrite transporter TERM 3139 4078782 - 4078763 - g 78 -10 -4.07568 | gap 1 GCCGCGCGCGGAAAA CCAGGACGC CCT GCG-CCTGG TCACGCCGGCACCAG TERM 3140 4079186 - 4079160 - g 85 -10 -4.28994 | opp_overlap 4079173 4079177 CAGCATGTACTAAAA CGGGCGCTGGGC CTG GACCAGCACCTG CTGGTGGATTACCTG Pput_3649 4078707 - 4080377 + | protein kinase Pput_3650 4080405 - 4081145 + | uroporphyrin-III C-methyltransferase TERM 3141 4081214 - 4081187 - T 100 -18.6 -3.67588 | opp_overlap 4081193, overlap 4081193 TAAACCCCAGGCAAA GAAAAACCCGGC CGAG GCCGGGTTTTTC ATGAAGCTTCAAACC TERM 3142 4081193 - 4081208 + T 100 -11.8 -4.73388 | opp_overlap 4081193 4081187 CCAGGCAAAGAAAAA CCCGGC CGAG GCCGGG TTTTTCATGAAGCTT TERM 3143 4081208 - 4081193 - T 100 -11.8 -5.30616 | opp_overlap 4081193, overlap 4081187 CCAGGCAAAGAAAAA CCCGGC CGAG GCCGGG TTTTTCATGAAGCTT Pput_3651 4082266 - 4081232 - | OmpF family protein TERM 3144 4082329 - 4082352 + r 70 -11.8 -2.60901 | gap 1, opp_overlap 4082324, overlap 4082328 AGAGGGACAACTCGA CGGCGAG-TCT AGC AGAACTCGCCG GTTCGTTAGAGATAT Pput_3652 4082944 - 4082378 - | RNA polymerase sigma factor SigX TERM 3145 4082717 - 4082735 + g 74 -4.6 -4.57569 | GAGCCAGGTCTTGAA CTTCGA CTTACCC TCGAAG TTTTTCAGCCCGTAC Pput_3653 4083882 - 4083058 - | TM helix repeat-containing protein TERM 3146 4083224 - 4083248 + g 70 -9.9 -3.55444 | overlap 4083225 AGCTCGCGCACGTAG ATGCCGGCCAG GAT CTGCCCGGCAA TTTCGCGACTGCCAA TERM 3147 4083225 - 4083247 + g 72 -13.4 -2.73124 | overlap 4083224 GCTCGCGCACGTAGA TGCCGGCCAG GAT CTGCCCGGCA ATTTCGCGACTGCCA Pput_3654 4084157 - 4083885 - | hypothetical protein TERM 3148 4084027 - 4084048 + g 78 -10.1 -4.07568 | opp_overlap 4084024, overlap 4084028 CTGAACAGATCACCC GCGCCAACC TGGC GGTTGGCGG TTTTCAGCACGCGAC TERM 3149 4084028 - 4084047 + g 75 -13.6 -3.04398 | opp_overlap 4084024, overlap 4084027 TGAACAGATCACCCG CGCCAACC TGGC GGTTGGCG GTTTTCAGCACGCGA Pput_3655 4085240 - 4084245 - | Mg2+ transporter protein, CorA family protein TERM 3150 4084697 - 4084710 + g 72 -2.3 -4.71426 | overlap 4084698 CCGGGGCATACCGCT CGTCG GATT CGACC TTTTCTTCCTCCAGG TERM 3151 4084985 - 4085016 + g 72 -4.3 -4.63218 | gap 1, overlap 4084988 ACAGCAACAGCTGTT CGTCCGCCATGGGC AGCAG GCGCG-GGCGGGTG TTTTCTTCCAGCAGC Pput_3656 4085759 - 4085268 - | ribonuclease activity regulator protein RraA Pput_3657 4087146 - 4086118 - | hypothetical protein TERM 3152 4086930 - 4086920 - G 78 -6.8 -4.62069 | overlap 4086921 4086922 CGCCGATTGGAAAAA CTGC CGT GCAG GAGAATGACCGGCAC TERM 3153 4087161 - 4087134 - G 100 -11.2 -5.24129 | TTGGTGCACAAAAAA GGGCGGGGTCCA TTGC TGGAGCTCGCCC TGGAAAAAACCAGGC TERM 3154 4087205 - 4087171 - R 78 -4.8 -5.00616 | opp_overlap 4087174 4087175, overlap 4087172 4087174 4087175 TCGCCCTGGAAAAAA CCAGGCAGGAGGACGC CAG ACGTCCCCCCGCGTTT TACTGCATCAGGCCG TERM 3155 4087202 - 4087174 - R 70 -10.9 -3.37655 | opp_overlap 4087174 4087175, overlap 4087172 4087171 4087175 CCCTGGAAAAAACCA GGCAGGAGGACGC CAG ACGTCCCCCCGCG TTTTACTGCATCAGG TERM 3156 4087201 - 4087175 - R 78 -14.4 -2.62111 | opp_overlap 4087175 4087174, overlap 4087174 4087172 4087171 CCTGGAAAAAACCAG GCAGGAGGACGC CAG ACGTCCCCCCGC GTTTTACTGCATCAG Pput_3658 4089588 - 4087213 - | phosphoenolpyruvate synthase TERM 3157 4087273 - 4087243 - G 70 -11.8 -3.14132 | overlap 4087246 GCCTTCGGCCAGGAA GAACCAGGTCTCGA GTA CCGAGTCCGGGTTC AGCGACACGCTTTCG TERM 3158 4089256 - 4089224 - G 73 -11.3 -3.62046 | gap 1, opp_overlap 4089221 4089220 4089251 GCAGTGGCGGAAGAA CGCACGGCAACGGC CATGTT GTCGTTGCCG-GCG GCCATTTCGGCGAAG Pput_3659 4089780 - 4090598 + | hypothetical protein TERM 3159 4090663 - 4090684 + T 100 -17.3 -4.68908 | opp_overlap 4090663 AGGCATACAAAAAAA GCCCCGGCA TCAC TGCCGGGGC TTTGTTTTACCTCAC TERM 3160 4090684 - 4090663 - T 100 -17.3 -5.72616 | opp_overlap 4090663 AGGCATACAAAAAAA GCCCCGGCA TCAC TGCCGGGGC TTTGTTTTACCTCAC Pput_3660 4095573 - 4090708 - | NAD-glutamate dehydrogenase TERM 3161 4091487 - 4091471 - G 72 -13.7 -2.76442 | opp_overlap 4091479, overlap 4091468 ACGATCACGTAAGCA CCGGCCA CGT TGGCCGG GCTCATGCCGGTCGA Pput_3661 4095848 - 4096201 + | hypothetical protein TERM 3162 4096323 - 4096307 - T 88 -15.1 -3.53012 | opp_overlap 4096317 CCTTGCGTCGCGAAA GGGCCGC GCA GCGGCCC CAGGATCTCGACATC TERM 3163 4096317 - 4096360 + T 77 -11 -3.55071 | gap 1, opp_overlap 4096307 4096348 CGAAAGGGCCGCGCA GCGGCCCCAG-GATCTCGACA TCA TGCATAGATTGCTGGGGCCGC TTTGCGGCCCTATCG Pput_3662 4097306 - 4096401 - | DNA-binding transcriptional regulator LysR TERM 3164 4097154 - 4097117 - G 72 -13.9 -2.77523 | overlap 4097114 4097112 CTTCGATCAACAGCA GCGCCTGGGCCGTCGCC ACCA GGCGCCCGCCCTCGCGC TCGAACAGGTTCAGG Pput_3663 4097430 - 4098662 + | diaminopimelate decarboxylase TERM 3165 4098781 - 4098761 - f 74 -12.5 -2.74144 | overlap 4098760 CCGTGATGCCGAAAC CCGGGCCGC TTT GCGGCCCAA TCGCGACGCAAGGCC Pput_3664 4098890 - 4099390 + | ECF subfamily RNA polymerase sigma-24 factor TERM 3166 4099549 - 4099539 - g 73 -6.8 -4.36914 | overlap 4099540 GGCGCGGGTAGAAAA GCTG CAG CAGC AATGGGCCATGGTGC Pput_3665 4099396 - 4100331 + | anti-FecI sigma factor, FecR Pput_3666 4100442 - 4102928 + | TonB-dependent siderophore receptor TERM 3167 4102950 - 4102966 + F 82 -15.1 -2.91264 | opp_overlap 4102948, overlap 4102949 TTCCGGGGAACGATC GGGCCGC TTT GCGGCCC TGTCTGGATGCGGAC Pput_3667 4103236 - 4105908 + | hypothetical protein Pput_3668 4105908 - 4107038 + | hypothetical protein Pput_3669 4108086 - 4107118 - | LysR family transcriptional regulator TERM 3168 4107524 - 4107546 + g 75 -12 -3.66178 | overlap 4107525 CGCACTACCCTGGCT TGCAGGGTGC GTA GCACCTTGCG TTTGGCATTGGCGGG Pput_3670 4108311 - 4108754 + | GCN5-related N-acetyltransferase Pput_3671 4108774 - 4109598 + | AraC family transcriptional regulator Pput_3672 4109707 - 4110093 + | cupin 2 domain-containing protein TERM 3169 4110865 - 4110898 + G 78 -12.3 -3.76379 | GCCGATCCTGAACGT TGCGCTGGAGCACGG CTAT CAGAGCGCCAGCGCA TTTACTGCCATGTTC Pput_3673 4110263 - 4110973 + | helix-turn-helix domain-containing protein TERM 3170 4111334 - 4111320 - g 71 -11.4 -3.44146 | overlap 4111302 CTGGCGCACAACCAA GGCCTG GCA CAGGCC GAGGCCAACGTGCAG TERM 3171 4111890 - 4111942 + G 81 -12.8 -3.72576 | gap 2, opp_overlap 4111849 GCCGAAGCCAGGACC TGCGTAGCCATCCCCACGCTGTCGGC GCC GCTGCCGGC-TGGCGATGGCTG-GCA TTTGCTCGAACGCCG Pput_3674 4111077 - 4112495 + | RND efflux system outer membrane lipoprotein TERM 3172 4112534 - 4112508 - f 70 -10.8 -3.30039 | opp_overlap 4112521 4112524, overlap 4112506 4112512 TAGCGAGAAGCAAGA CCAACAGCGAGC ACC GCCCACTGTAGG AGCGGGTTTACCCGC TERM 3173 4113291 - 4113261 - g 77 -13.8 -3.36878 | overlap 4113232 GCCAGCCAGGCACAA GCCGCGCGGCAAGG TGC CCAGGCCGCGCTGC GCCAGCAACGCGCTC Pput_3675 4112697 - 4113842 + | secretion protein HlyD family protein TERM 3174 4114840 - 4114851 + G 73 -3.6 -4.77036 | AGTGCCAAGTTCATG GTCG CCAG CGGC TTTTTGATCATGGCG Pput_3676 4113832 - 4115346 + | EmrB/QacA family drug resistance transporter Pput_3677 4115413 - 4116177 + | GntR family transcriptional regulator Pput_3678 4119314 - 4116231 - | acriflavin resistance protein Pput_3679 4120408 - 4119311 - | RND family efflux transporter MFP subunit Pput_3680 4120493 - 4120948 + | MerR family transcriptional regulator Pput_3681 4121095 - 4121343 + | CsbD family protein TERM 3175 4121326 - 4121361 + T 70 -9.6 -3.53224 | gap 1, opp_overlap 4121348 ACACTGGTGGTGTCT CGCCTGCTACGCCGCTG AAC CA-CGGCGCCTCAGGCG TTTCAGGGCCGGATA Pput_3682 4122649 - 4121396 - | outer membrane porin TERM 3176 4122436 - 4122420 - G 73 -8.7 -4.07568 | GTGCCTTGGGTAAAA CCCGACT GGT AGTCGAG CAGAAAGCCTTGAGC Pput_3683 4124017 - 4122713 - | CitMHS family citrate/H+ symporter Pput_3684 4125439 - 4124132 - | sodium:dicarboxylate symporter Pput_3685 4126623 - 4125511 - | hypothetical protein Pput_3686 4126738 - 4127631 + | LysR family transcriptional regulator Pput_3687 4127698 - 4128489 + | hypothetical protein Pput_3688 4128877 - 4128581 - | hypothetical protein TERM 3177 4129457 - 4129447 - g 77 -2.4 -5.0538 | CCTGAGCGCAAAAAA GGCC GAA GCCC TTGCCAAGGCGCATA TERM 3178 4130045 - 4130059 + G 76 -8.6 -4.19238 | overlap 4130035 GCCATCGGCGGCGGT TACCTG ACG CAGGTA TTTTCCCATTGGGAC Pput_3689 4129274 - 4131397 + | HAD family hydrolase Pput_3690 4132661 - 4131477 - | acetyl-CoA acetyltransferase TERM 3179 4132399 - 4132423 + g 74 -12.1 -3.53012 | CCTGAAGCGCACTGG CGGTCGACGGT CTG ACCGCTGACCG TTTGGGGCAGGCCGG Pput_3691 4133110 - 4132658 - | thioesterase superfamily protein Pput_3692 4134273 - 4133110 - | iron-containing alcohol dehydrogenase Pput_3693 4136082 - 4134307 - | acyl-CoA dehydrogenase domain-containing protein Pput_3694 4137317 - 4136079 - | 3-hydroxybutyryl-CoA epimerase TERM 3180 4137723 - 4137667 - g 78 -15.2 -2.82193 | gap 1, opp_overlap 4137666 AGCAGATCGAGCAGA CGTTGGGC-ACCGGCGATGGCTTCG AGCCTCAG CGCAGCCATCGCCAGTTGCGCATCG CCCTCACCGATTTCG Pput_3695 4137345 - 4138325 + | LysR family transcriptional regulator Pput_3696 4138427 - 4140388 + | beta-lactamase domain-containing protein Pput_3697 4140710 - 4140417 - | hypothetical protein Pput_3698 4141089 - 4140703 - | hypothetical protein TERM 3181 4141053 - 4140998 - G 93 -20.6 -2.97171 | gap 1, overlap 4140995 4141050 CAGGCCAGGAAAGTA CGTTCGTT-GGCCAGGGTGAAGCGC GGATCAG GCGCTTCACCCTGGCCCAACAGCCG CCGCGACCAGTCAGG Pput_3699 4142411 - 4141089 - | hypothetical protein Pput_3700 4144275 - 4142422 - | hypothetical protein Pput_3701 4144451 - 4145434 + | LysR family transcriptional regulator Pput_3702 4146742 - 4145447 - | major facilitator transporter Pput_3703 4147971 - 4146805 - | acyl-CoA dehydrogenase domain-containing protein Pput_3704 4149533 - 4147986 - | AMP-dependent synthetase and ligase TERM 3182 4148081 - 4148093 + g 79 -9.1 -4.15044 | opp_overlap 4148079, overlap 4148043 GCTCGCTGACGAAGT CCACG GCA CGTGG TTTCTTGAAACCGGC Pput_3705 4149778 - 4150560 + | hypothetical protein Pput_3706 4150605 - 4151492 + | dihydrodipicolinate synthetase TERM 3183 4151500 - 4151532 + F 100 -11.2 -5.40072 | opp_overlap 4151501 4151502, overlap 4151501 4151502 CCAACTGATGCACAA ACCTGCCCGGCAGC CTGTC GCTGTCGGGCAGCC TTTTTTTCAGGAACA TERM 3184 4151501 - 4151531 + F 91 -14.7 -3.83561 | opp_overlap 4151501 4151502, overlap 4151500 4151502 CAACTGATGCACAAA CCTGCCCGGCAGC CTGTC GCTGTCGGGCAGC CTTTTTTTCAGGAAC TERM 3185 4151531 - 4151501 - f 89 -12.5 -3.93583 | opp_overlap 4151501 4151500 4151502, overlap 4151502 CAACTGATGCACAAA CCTGCCCGGCAGC CTGTC GCTGTCGGGCAGC CTTTTTTTCAGGAAC TERM 3186 4151502 - 4151530 + F 90 -18.2 -2.89655 | opp_overlap 4151502 4151501, overlap 4151501 4151500 AACTGATGCACAAAC CTGCCCGGCAGC CTGTC GCTGTCGGGCAG CCTTTTTTTCAGGAA TERM 3187 4151530 - 4151502 - f 83 -16 -2.95668 | opp_overlap 4151501 4151500 4151502, overlap 4151501 AACTGATGCACAAAC CTGCCCGGCAGC CTGTC GCTGTCGGGCAG CCTTTTTTTCAGGAA Pput_3707 4151641 - 4152855 + | benzoate transporter TERM 3188 4152876 - 4152896 + F 75 -12.5 -3.02829 | CTTTCCACCACCTTG CCGTGCGCC AGG GGCGCACGC TGTTCAACAGGTATC TERM 3189 4154126 - 4154098 - g 74 -13 -3.36878 | overlap 4154114 CGTATTCAGCCAGAA GGCGCGCGACTG AACAG CTGGCGCGCGCC CTGTAGGCCCGGTGC Pput_3708 4152915 - 4154132 + | major facilitator transporter Pput_3709 4155478 - 4154168 - | hypothetical protein TERM 3190 4155453 - 4155418 - G 78 -5.4 -4.67982 | TGCCATCGAAGAAAA CGCCAAACCGCAAG GTGATCGG CGTAAGGTTTGGCG TGCTGGCGCTGGTCA TERM 3191 4155730 - 4155740 + G 77 -2.4 -4.99043 | overlap 4155716 4155715 CGTGAAGCGCTGATC GCGC TGC GCAC TTTTCTTTCTACCCA TERM 3192 4156229 - 4156217 - g 74 -4.8 -4.67353 | overlap 4156218 TGATGCATGTAAAAA TCGG CTTCC CCGA CGCCGCCGTAGAGCG Pput_3710 4155706 - 4156665 + | ATPase Pput_3711 4156658 - 4157614 + | hypothetical protein TERM 3193 4157941 - 4157958 + G 74 -9.1 -3.91897 | gap 1 AGCCACACCCTCAAC GGCC-GCC AGT GGCTGGCC TTTCTGGATAACCGC Pput_3712 4157611 - 4158105 + | hypothetical protein TERM 3194 4158467 - 4158438 - g 74 -13.7 -2.89421 | gap 1, opp_overlap 4158431, overlap 4158433 4158430 GGAAGAACGAGGACA TCAGCCGCCTCGAC CTG GTCAAGGCG-CTGA TGGGCGACTTCCTGC Pput_3713 4158098 - 4159174 + | von Willebrand factor, type A TERM 3195 4159707 - 4159681 - g 76 -8.7 -4.15565 | gap 1 TCGATCATGCCAAAA CCCGGCCAGCGT GCCG AC-CTGGCCGTG CAAAAAGGCCTGGCG TERM 3196 4159747 - 4159714 - g 74 -4.6 -4.56597 | gap 3 CTGGCCGTGCAAAAA GGCC-TGG-CGCTGCTG GCC CAG-AGCGGCCTCGGCC AAGGCCGCCTGCTGC TERM 3197 4160716 - 4160688 - g 72 -12.3 -3.26473 | overlap 4160712 CGAAAGCAGCAGCAA CAGCCAGGCCGCC CCC GGCAACCAGGCCG GGGGTGACGACAGCG Pput_3714 4159171 - 4160889 + | TPR repeat-containing protein Pput_3715 4160886 - 4162517 + | hypothetical protein Pput_3716 4163021 - 4162590 - | hypothetical protein TERM 3198 4164062 - 4164048 - g 73 -6.4 -4.31837 | overlap 4164053 AAGAAACGCAAGAAA GACCAG GCG CTGATC GCCATCAGCCACGCG Pput_3717 4163511 - 4164749 + | nuclease SbcCD, D subunit TERM 3199 4165475 - 4165459 - g 77 -13.7 -3.31144 | TGCCGAGCTCGACAA GCGCCTG GAG CAGGCGC AGCAGCAGTTCAAGG TERM 3200 4166974 - 4166933 - g 72 -4.3 -4.56597 | gap 1, overlap 4166935 4166957 CTGGCCCTGCAAAAA GACGCCGCCCGCCTG-AACC AGC AATTGCAGGCGGCCCACGAC GCCCAGCAACAGGCC Pput_3718 4164746 - 4168390 + | SMC domain-containing protein TERM 3201 4168647 - 4168605 - g 86 -12.1 -4.18018 | gap 1, overlap 4168608 GGCGCTGACGCAAAA CG-ACCCGCAGGATTGGC GGCTACAG GCCAACCCTGCGGCTGCG CAGCAGGCTGAAACG TERM 3202 4168643 - 4168608 - g 73 -12.6 -3.11208 | overlap 4168605 GCTGACGCAAAACGA CCCGCAGGATTGGC GGCTACAG GCCAACCCTGCGGC TGCGCAGCAGGCTGA Pput_3719 4168387 - 4168980 + | glutathione S-transferase domain-containing protein Pput_3720 4169229 - 4169053 - | hypothetical protein Pput_3721 4170494 - 4169352 - | hypothetical protein Pput_3722 4170738 - 4170448 - | hypothetical protein TERM 3203 4170856 - 4170888 + r 85 -15.5 -3.05384 | AGGAGCGGCCTTGTG TCGCGATTGGGCCGC AAT GCGGCCCCCTTGCGA TTCAATGGGCGAAAA Pput_3723 4173289 - 4170890 - | RND efflux transporter Pput_3724 4174326 - 4173286 - | hypothetical protein TERM 3204 4173762 - 4173724 - G 85 -14.6 -3.64703 | opp_overlap 4173755, overlap 4173726 4173751 4173753 GTCGGTGGAGCGAAA CATGCCGCCCTGCTCACC CAC GATGAACAGGCCGGCATC GCGCACGTGGGCGAT TERM 3205 4173760 - 4173726 - G 93 -17.2 -3.40597 | opp_overlap 4173755, overlap 4173724 4173751 4173753 CGGTGGAGCGAAACA TGCCGCCCTGCTCACC CAC GATGAACAGGCCGGCA TCGCGCACGTGGGCG TERM 3206 4174061 - 4174039 - G 73 -3.3 -4.72272 | overlap 4174041 4174055 GTCGTCGAGGAAAAA CACGGCAGT GAGCA ATTGCCGGG TGGGTACCCGGGCCT Pput_3725 4177255 - 4174598 - | aminopeptidase N Pput_3726 4178099 - 4177269 - | hypothetical protein TERM 3207 4177798 - 4177838 + g 72 -3.8 -4.56775 | gap 1, overlap 4177799 4177800 ATGCAGAACTGTTCG CCCCACGACGGCTCCCGGC AGGT GCCG-GCGTCGTAGTGGCA TTTTTCCGGGGCCAT TERM 3208 4177972 - 4178011 + g 75 -14.2 -2.78384 | opp_overlap 4177953 CCGAGGTATTCCAGG CGCAGGCGCTGGCCGATC ATGG GGTTGACCGGCACCTGCG TGTCATCCAGGCGGA Pput_3727 4178356 - 4178096 - | hypothetical protein Pput_3728 4179257 - 4178370 - | rhomboid family protein Pput_3729 4180225 - 4179254 - | metallophosphoesterase TERM 3209 4179635 - 4179587 - G 70 -10 -3.61398 | CTTGGTGCGGAAGAA CGCGCGGGTCAGGCCGTCGCCG CCGGT CAGCGTCAGCCCGTCCGGCAGG CGCATGTCGGTACCG ppnK 4181115 - 4180225 - | inorganic polyphosphate/ATP-NAD kinase TERM 3210 4180311 - 4180327 + g 75 -4.3 -4.72986 | overlap 4180313 CCAGCGGGTGGATCA GGCGCAG CTT TTGCGGC TTTTTGCTGACCGTG Pput_3731 4181204 - 4182136 + | hypothetical protein TERM 3211 4182195 - 4182137 - f 100 -23.9 -2.52464 | gap 1, opp_overlap 4182139, overlap 4182178 CTGCCCGGTAACTGA TGTCGCCTG-TTCCGGCCCCTTCGCGGG CCCG CCCGCGAAGAGGCCGGTGGCTGGCAACA GAATTTTCACAGACC Pput_3732 4182299 - 4182844 + | cytochrome B561 Pput_3733 4183728 - 4182835 - | 1-aminocyclopropane-1-carboxylate deaminase-like protein TERM 3212 4182924 - 4182880 - G 100 -26.6 -3.14132 | overlap 4182906 GCCTGTGTGCACGAA GATCAGGCGGCTGCCGGGCT TGAAC AGCCCGGCAGCGACCTGATC ACGCAAGGCCAGCAG Pput_3734 4186001 - 4183965 - | NADH:flavin oxidoreductase/NADH oxidase TERM 3213 4185719 - 4185744 + g 82 -14.7 -3.33315 | overlap 4185710 4185707 TGCCACCGGCAGCGT GCACCGCCTCG GTGA CGATGCGGTGC TTGTCGGCCTCTTCC Pput_3735 4187173 - 4186265 - | AraC-like transcriptional regulator TERM 3214 4186528 - 4186550 + g 71 -8.4 -3.94877 | opp_overlap 4186527, overlap 4186531 AGCTCGCCAACTCAT CGATGTGCAG CGG CTGCGCATAG TTGTTGTTCAACCAT TERM 3215 4187287 - 4187271 - R 81 -10.8 -4.09685 | opp_overlap 4187271 4187270 TTTGATCTGCCAAAA GCCCGG TTTTT CCGGGC CTTTGGCGCAGCCCA Pput_3736 4187710 - 4187309 - | hypothetical protein Pput_3737 4188920 - 4187997 - | alcohol dehydrogenase Pput_3738 4189432 - 4190169 + | short-chain dehydrogenase/reductase SDR Pput_3739 4190199 - 4190453 + | hypothetical protein TERM 3216 4190461 - 4190482 + F 95 -14.5 -3.98661 | AACGTTGAAGCGCAA GCCGGAATG GAGA CATTCCGGC TTTGTCGTGACTCTG TERM 3217 4190906 - 4190926 + G 74 -4.7 -4.59853 | CAATGGGAAACCAGC GAAGTTGCT AAA GGCGATTTC TTTTTGACCACTTCG Pput_3740 4190666 - 4191571 + | helix-turn-helix domain-containing protein Pput_3741 4191822 - 4191721 - | hypothetical protein Pput_3742 4192788 - 4191883 - | LysR family transcriptional regulator TERM 3218 4193399 - 4193380 - g 73 -6.4 -4.27441 | ATCATCATCAACAAA CTGGTCAT CGAC ATGACCCG CGAAGACTGGGAGCG Pput_3743 4193086 - 4193850 + | short-chain dehydrogenase/reductase SDR Pput_3744 4193882 - 4194169 + | antibiotic biosynthesis monooxygenase Pput_3745 4194213 - 4195052 + | short-chain dehydrogenase/reductase SDR TERM 3219 4195079 - 4195059 - T 79 -14 -2.8294 | opp_overlap 4195040, overlap 4195056 CAGGTTTGAGAACCA GCGGCTCG CTTCC CGAGCCGC CATCCAAACGAACTG Pput_3746 4195526 - 4195182 - | hypothetical protein Pput_3747 4195724 - 4196428 + | pili assembly chaperone Pput_3748 4196454 - 4197443 + | hypothetical protein TERM 3220 4198648 - 4198623 - g 91 -20.5 -2.82623 | overlap 4198620 GGTGCTGGAGAACCA CCTGGCCCAGC AGTG GCTGGGCCAGG ACCCGGCACGCGGTG TERM 3221 4198904 - 4198892 - g 75 -3.3 -4.93547 | overlap 4198886 4198893 4198896 CCAACGAAGCAAAAA CCCAG TTC CTGGC GACCATGAGCCACGA Pput_3749 4197514 - 4200321 + | histidine kinase Pput_3750 4200318 - 4201511 + | response regulator receiver modulated diguanylate phosphodiesterase Pput_3751 4201596 - 4204808 + | multi-sensor hybrid histidine kinase Pput_3752 4204878 - 4205525 + | two component LuxR family transcriptional regulator Pput_3753 4205643 - 4206242 + | fimbrial protein-like protein Pput_3754 4206314 - 4207060 + | pili assembly chaperone TERM 3222 4208919 - 4208937 + G 89 -17.4 -3.14132 | CCCACTCGGCAGCCG CGCCCGCG CAC CGCGGGCG TTCGTCACCACCAGC Pput_3755 4207144 - 4209699 + | fimbrial biogenesis outer membrane usher protein Pput_3756 4209872 - 4210990 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pput_3757 4210977 - 4212035 + | helix-turn-helix domain-containing protein Pput_3758 4213150 - 4212326 - | hypothetical protein TERM 3223 4213292 - 4213307 + r 74 -10.4 -3.69434 | opp_overlap 4213292, overlap 4213305 GCACCAACGAAAAAA GCGACC CGAA GGTCGC TTTAACGTTGCTTCA TERM 3224 4213307 - 4213292 - R 100 -10.4 -5.30155 | opp_overlap 4213292 4213305 GCACCAACGAAAAAA GCGACC CGAA GGTCGC TTTAACGTTGCTTCA TERM 3225 4213521 - 4213506 - R 91 -4.7 -5.64274 | opp_overlap 4213496 GCAGGCACAAAAAAA GCGAT AACACG ATCGC TTCTCTTGTGTTTGC TERM 3226 4214103 - 4214142 + r 93 -16.6 -3.53012 | gap 1, opp_overlap 4214103 CTCTTCGCGGGTAAA CCCGCTCCTACAGTCGG ACATTAA CCG-TTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 3227 4214142 - 4214103 - R 85 -14.4 -3.53012 | gap 1, opp_overlap 4214103 CTCTTCGCGGGTAAA CCCGCTCCTACAGTCGG ACATTAA CCGT-TGTAGGAGCGGG TTTACCCGCGAAGAG Pput_3759 4214955 - 4214182 - | oxidoreductase Pput_3760 4216163 - 4214952 - | O-succinylhomoserine sulfhydrylase Pput_3761 4217685 - 4216180 - | amidophosphoribosyltransferase Pput_3762 4218285 - 4217728 - | colicin V production protein TERM 3228 4218085 - 4218075 - G 73 -6.8 -4.25256 | TGGCGACGAAAAGAA TGGC GCA GCCA GCGATGACGCGCATC Pput_3763 4219127 - 4218483 - | sporulation domain-containing protein TERM 3229 4219080 - 4219100 + g 71 -8.3 -3.83169 | opp_overlap 4219062 4219061 CAGCGCCACCAGCAC CAGCGCA CCCACCA TGCGCTG TTTCATCCCTTTATC Pput_3764 4220418 - 4219111 - | FolC bifunctional protein Pput_3765 4221311 - 4220418 - | acetyl-CoA carboxylase subunit beta Pput_3766 4222152 - 4221532 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 3230 4221790 - 4221780 - G 78 -6.8 -4.63486 | overlap 4221781 4221782 AGGTGTCCAATAAAA TGCC GCG GGCA CCCGCGTAACGCTGA truA 4223212 - 4222214 - | tRNA pseudouridine synthase A TERM 3231 4223139 - 4223118 - G 77 -13 -3.57783 | opp_overlap 4223117 GGATTATAACGACAA CGGCAGCC TCGTAG GGCTGCCG GTGGTTGCGCACTGC TERM 3232 4223153 - 4223206 + g 93 -19.7 -3.05384 | gap 1, opp_overlap 4223195, overlap 4223142 CGGTGGTTGCGCACT GCATGTGCGGGCCTCTTCGCGGGC GCGGTCA GCCCGCCAAGAGGCCTG-ACCTGC TTGCATCAGACCAGC Pput_3768 4225947 - 4223212 - | peptidoglycan-binding LysM TERM 3233 4224666 - 4224688 + g 76 -12.6 -3.39749 | CCTGCTCTTCTTCCA GCGCCCGCGC CAT GCGCAGGTGC TTCTCGGCTTCTTGC Pput_3769 4227023 - 4226019 - | aspartate-semialdehyde dehydrogenase TERM 3234 4227751 - 4227730 - R 71 -4.4 -4.56597 | TTGTCGTGGCAAAAA GGAACCAA AAACCG TCGGCTCC CATCATCCGGCCCCT TERM 3235 4228076 - 4228099 + r 100 -15.4 -4.62069 | opp_overlap 4228076 TCAGGCATAAAAAAA TACCGCACTG TCAC CAGTGCGGTA TTTTTCAGGTAAAGC TERM 3236 4228099 - 4228076 - R 100 -15.4 -5.64274 | opp_overlap 4228076 TCAGGCATAAAAAAA TACCGCACTG TCAC CAGTGCGGTA TTTTTCAGGTAAAGC Pput_3770 4229235 - 4228123 - | aspartate-semialdehyde dehydrogenase Pput_3771 4230381 - 4229299 - | 3-isopropylmalate dehydrogenase Pput_3772 4231200 - 4230436 - | methyltransferase type 11 leuD 4231961 - 4231317 - | isopropylmalate isomerase small subunit Pput_3774 4233391 - 4231958 - | isopropylmalate isomerase large subunit Pput_3775 4233523 - 4234401 + | LysR family transcriptional regulator TERM 3237 4236257 - 4236241 - g 79 -13.7 -3.40403 | CTGGGCCGACGACAA GCAGCGC AGC GCGCTGC TGGCCGAATTGCACG TERM 3238 4237551 - 4237518 - g 71 -13.1 -3.02511 | TCGATGCGCTGAAGA TCGACCAGAGCTTCG TGCG CGATGCACCGGTCGA CCCCAACGACGCAGA Pput_3776 4234463 - 4237759 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3239 4237841 - 4237800 - T 87 -16.2 -3.29511 | gap 2, opp_overlap 4237810, overlap 4237810 GGGACCGCGTGAGAA GCAC-G-AAAAAGGGCACCT CTGG AGGTGCCCTTTTTTCAGTGC CGCGCGGTCAGTTCA TERM 3240 4237829 - 4237810 - T 100 -13.6 -4.8269 | opp_overlap 4237810, overlap 4237800 GAGAAGCACGAAAAA GGGCACCT CTGG AGGTGCCC TTTTTTCAGTGCCGC TERM 3241 4237810 - 4237829 + T 100 -13.6 -5.08824 | opp_overlap 4237810 4237800 GAGAAGCACGAAAAA GGGCACCT CTGG AGGTGCCC TTTTTTCAGTGCCGC Pput_3777 4238292 - 4237849 - | heat shock protein Hsp20 Pput_3778 4238807 - 4238295 - | hypothetical protein Pput_3779 4240144 - 4239173 - | dihydrouridine synthase, DuS TERM 3242 4240192 - 4240166 - R 93 -10.9 -4.62069 | overlap 4240186 4240188 GTCTCAGCGGAAAAA GCCGGCAGTTT AACAA AAAATGCCGGC GACTCAGGCGCCGAT TERM 3243 4240209 - 4240186 - R 90 -5.2 -5.46657 | gap 1, overlap 4240166 4240188 CAGTTTAACAAAAAA TG-CCGGCGAC TCA GGCGCCGATCA GCGCCGGACCGTAAC Pput_3780 4240630 - 4240196 - | thioesterase superfamily protein Pput_3781 4241612 - 4240734 - | hypothetical protein TERM 3244 4241467 - 4241443 - G 70 -7.9 -4.09108 | gap 1 CGCAAGGCAGACAAA CCGAAGCGCA GTGTAA TGCGCT-CGG CGCTGGCCAGCACGG TERM 3245 4241653 - 4241633 - R 79 -11.8 -3.57144 | TGCTCCAGGGTTAAA GCACCGCC GATTT GGCGGCGC GCAGAATACGGTCAG Pput_3782 4242167 - 4241628 - | TetR family transcriptional regulator TERM 3246 4241933 - 4241904 - G 74 -12.7 -3.39327 | GCGCGAGAGGTAGAA GGCCCCGGCCAGC GCTC GCCGCCCGGCGCC ATCGAGATTGGGGTC TERM 3247 4242308 - 4242284 - R 95 -8.6 -5.43553 | opp_overlap 4242284 AGGGAAAAAACAAAA GGCCCATTCA ATAAG CGAATGAGCC TTTAAAGTCCCGCAA TERM 3248 4242568 - 4242536 - R 81 -12.9 -3.56643 | opp_overlap 4242541, overlap 4242541 GCTATAGCCCCGAAA CAAAAGGCTCATCAA TAG TCGACGAGCCTTTTA AAGCCCTGCAAAACG TERM 3249 4242563 - 4242541 - R 100 -10.6 -4.87133 | opp_overlap 4242541, overlap 4242536 AGCCCCGAAACAAAA GGCTCATCAA TAG TCGACGAGCC TTTTAAAGCCCTGCA TERM 3250 4243305 - 4243289 - R 88 -15.1 -3.53012 | opp_overlap 4243281 4243292, overlap 4243300 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CGACGGATTTGTGTC gltX 4244888 - 4243407 - | glutamyl-tRNA synthetase TERM 3251 4244433 - 4244465 + g 70 -9.8 -3.62597 | gap 1 CTTCATGCGGATCAC GTGCGGC-TCGCCAG CGTC CAGGCGGCGCTGCAC TTCTTCGGCGCTCAG Pput_3784 4244924 - 4246087 + | secretion protein HlyD family protein TERM 3252 4246528 - 4246506 - g 75 -12 -3.54741 | opp_overlap 4246493 CACCACCGTGCCAAA GGCATGGCGA TGT TCGCCATGAC CGCCACTTTTGCCCC Pput_3785 4246077 - 4247627 + | EmrB/QacA family drug resistance transporter Pput_3786 4249770 - 4247755 - | excinuclease ABC subunit B TERM 3253 4249825 - 4249842 + H 70 -9.8 -3.53091 | opp_overlap 4249825 4249824 AGTCTATACCCAAAT GCGCCC GTTCGG GGGCGC TTTCAAGGCACAGGT Pput_3787 4250055 - 4251251 + | aromatic amino acid aminotransferase TERM 3254 4251432 - 4251399 - T 100 -22.5 -3.16475 | opp_overlap 4251399 4251402, overlap 4251402 GAGCCAGACATTGAA GAAGCCCCCGGATGC GCAA GCAACCGGGGGCTTC TTCGTTGCGCTGGAA TERM 3255 4251399 - 4251432 + T 100 -22.5 -3.35813 | opp_overlap 4251399 4251402, overlap 4251402 GAGCCAGACATTGAA GAAGCCCCCGGATGC GCAA GCAACCGGGGGCTTC TTCGTTGCGCTGGAA TERM 3256 4251429 - 4251402 - T 100 -18.4 -3.72231 | opp_overlap 4251399 4251402, overlap 4251399 CCAGACATTGAAGAA GCCCCCGGATGC GCAA GCAACCGGGGGC TTCTTCGTTGCGCTG TERM 3257 4251402 - 4251429 + T 100 -18.4 -3.8186 | opp_overlap 4251402 4251399, overlap 4251399 CCAGACATTGAAGAA GCCCCCGGATGC GCAA GCAACCGGGGGC TTCTTCGTTGCGCTG Pput_3788 4251849 - 4251448 - | cupin 2 domain-containing protein TERM 3258 4251583 - 4251595 + g 71 -5.5 -4.3129 | ATACCAATAATCGCC GGCCT TGT AGGTC TTTTCCTGCTCGCTG Pput_3789 4252745 - 4252188 - | hypothetical protein Pput_3790 4253361 - 4252756 - | hypothetical protein TERM 3259 4253404 - 4253390 - R 85 -8.5 -4.72272 | overlap 4253400 GCCGGCGACGAAAAA CCGGC GAATA GCCGG CGGATGCAGCTTTTG Pput_3791 4254396 - 4253428 - | molybdenum cofactor synthesis domain-containing protein TERM 3260 4253866 - 4253848 - G 70 -12.4 -3.15861 | CATGAGCTCGATGAA GCGCAGCT CGA AGCCGCGC GCGAGGCAGTAATCC TERM 3261 4254463 - 4254419 - R 83 -15.2 -3.18264 | gap 1, opp_overlap 4254432, overlap 4254432 TCCGGCATGGATGAA GGGGCCGGCAA-AACCTGACT CATA AATCAGGTTTTTGCAAGCCCC ATGAGCAATGCCGAA Pput_3792 4255288 - 4254653 - | TetR family transcriptional regulator TERM 3262 4255149 - 4255173 + g 74 -14.3 -2.62616 | overlap 4255162 4255164 TTGTAGATCGTGCCT TTGCCGATGCC CAC GGCGTCGGCGA TCATCTCGACGGTGA TERM 3263 4255536 - 4255548 + r 70 -3.3 -4.73614 | opp_overlap 4255528, overlap 4255524 CGATAAAGGTGCTCA GGGAC CGC GTACC TTTGTTTTACTCCTA TERM 3264 4255574 - 4255599 + r 100 -6.1 -5.93809 | overlap 4255581 TCCTAATGGTCTTAA CCCGGATTC CTCCCCCA GAACCCGGG TTTTTTTTGTGGGGA Pput_3793 4257054 - 4256272 - | TatD family hydrolase Pput_3794 4258071 - 4257085 - | DNA polymerase III subunit delta' Pput_3795 4258696 - 4258064 - | dTMP kinase Pput_3796 4259926 - 4258706 - | aminodeoxychorismate lyase Pput_3797 4260746 - 4259931 - | 4-amino-4-deoxychorismate lyase Pput_3798 4262032 - 4260746 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 3265 4261314 - 4261304 - G 79 -8.2 -4.27117 | opp_overlap 4261303 GTCGGACAACACAAA GCCG TCA CGGC CCTTGTCCCATGGGC TERM 3266 4262063 - 4262014 - G 72 -12.3 -3.38812 | opp_overlap 4262014, overlap 4262012 CCTTTTCTAATAACA GAGTCTCTTGCCATTGCATTCAA GTGC TGGAATGAAATGGCAACAGGCTC TTGGTGCGCGGTGAA TERM 3267 4262014 - 4262063 + g 80 -14.5 -3.14931 | opp_overlap 4262014 4262012 CCTTTTCTAATAACA GAGTCTCTTGCCATTGCATTCAA GTGC TGGAATGAAATGGCAACAGGCTC TTGGTGCGCGGTGAA TERM 3268 4262110 - 4262096 - R 87 -10 -4.57341 | AAGCCGCCTGAAAAA TGCGAG GCG CTCGCA AAGAAAAAACCGCAC TERM 3269 4262151 - 4262113 - R 79 -12.6 -3.53444 | gap 1, opp_overlap 4262120, overlap 4262120 CGAGGCGCTCGCAAA GAAAAAACCGCAC-GCC GGCGAA GGCAGTGCGGTTTTCCC CGACAAGAAACGTCG TERM 3270 4262144 - 4262120 - R 100 -9.3 -5.63517 | gap 1, opp_overlap 4262120, overlap 4262113 CTCGCAAAGAAAAAA CCGCAC-GCC GGCGAA GGCAGTGCGG TTTTCCCCGACAAGA TERM 3271 4262120 - 4262144 + r 75 -9.3 -4.07568 | gap 1, opp_overlap 4262120 4262113 CTCGCAAAGAAAAAA CCGCAC-GCC GGCGAA GGCAGTGCGG TTTTCCCCGACAAGA Pput_3799 4262414 - 4262178 - | acyl carrier protein TERM 3272 4262359 - 4262383 + g 78 -6.3 -4.64334 | overlap 4262361 4262377 GTCACTTCTTCTTCC TTGACGCCCAG TTG CTCGGCGACGA TTTTCTTGACGCGTT fabG 4263358 - 4262618 - | 3-ketoacyl-(acyl-carrier-protein) reductase Pput_3801 4264312 - 4263374 - | malonyl CoA-acyl carrier protein transacylase Pput_3802 4265420 - 4264440 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 4265636 - 4265454 - | 50S ribosomal protein L32 Pput_3804 4266177 - 4265650 - | hypothetical protein Pput_3805 4266274 - 4266852 + | Maf-like protein Pput_3806 4268050 - 4267061 - | signal peptide peptidase SppA, 36K type TERM 3273 4267376 - 4267396 + g 72 -3.9 -4.56597 | opp_overlap 4267346 ATCCAGCACGCCCTG CCAGAACCG GGT CTCTTCTGG TTTTTCCGGCGAAAA Pput_3807 4268731 - 4268057 - | HAD family hydrolase Pput_3808 4269736 - 4268735 - | RluA family pseudouridine synthase TERM 3274 4269203 - 4269218 + g 70 -10.4 -3.63991 | opp_overlap 4269177 GGCGGCATGCAGGTG GCGCAG CATG CTGCGC TTCTTGGCGATCATC TERM 3275 4269341 - 4269365 + g 74 -10 -3.72324 | gap 2 GCTCAGGCCACTGCC GCCGTGCACGGC GAT GCCG-GC-CGGC TTGTTCATCACGATA TERM 3276 4270056 - 4270026 - H 74 -11 -3.25823 | TGCCTTGGACATGAA TGGCGCCAGCGCAG AAC CAGCGCTGGCGAAA AATGCAACCCGTTGC TERM 3277 4270392 - 4270408 + H 84 -13.7 -3.55622 | CGTCGCTCGACACGG GGGTGGC CCG GCCACCC TTTGCGCACCTTGGC TERM 3278 4271874 - 4271844 - g 100 -11.9 -4.4078 | overlap 4271862 4271865 CCTGCTGAACGAAAA GCGTAACTCGATC ACCAA GATCGAGCTGCGC ACCCGTGCGCGCATC TERM 3279 4272276 - 4272256 - g 86 -8.2 -4.56597 | overlap 4272258 CCCGCCGCCGAAAAA CCGGCTGC CGAGC GCAGCCCG CGTAACGAAGAACGC TERM 3280 4272333 - 4272311 - g 71 -9 -3.72695 | overlap 4272286 4272289 ACGGCCGCCAGCAAA GCCGCAACCG CAA CGGCCGCCGC GACGAAGAACGCAAA TERM 3281 4272401 - 4272349 - g 100 -19.7 -3.8646 | overlap 4272343 4272350 4272388 GACGAAGAACGCAAA CCGCGTGAAGAGCGTGCCGAGCGCG CAC CGCGCGAGGAACGCGCCCCACGCGA AGAACGTGCACCGCG TERM 3282 4272400 - 4272350 - g 93 -21 -2.91153 | overlap 4272343 4272349 4272388 ACGAAGAACGCAAAC CGCGTGAAGAGCGTGCCGAGCGCG CAC CGCGCGAGGAACGCGCCCCACGCG AAGAACGTGCACCGC TERM 3283 4272668 - 4272640 - g 70 -10.2 -3.61715 | overlap 4272657 CAGCCGCGTGAAGAA CGTGTAGCCCGC GAAGA GCGTGCTCCACG CGAAGAACGCGCACC TERM 3284 4272749 - 4272712 - g 77 -12.8 -3.62046 | overlap 4272695 4272730 4272748 GCACCGCGTGAAGAA CGTGCTCCACGTGAAG AACGTG CTCCACGTGAAGAACG CGCACCGCGTGAAGA TERM 3285 4272821 - 4272766 - g 73 -11 -3.62046 | overlap 4272730 4272783 4272802 4272803 4272820 GCACCGCGTGAAGAA CGTGCTCCACGTGAAGAGCGCGCACC TCGG GAAGAACGCGCTCCACGCGAAGAACG CGCCCCGCGCCCACC TERM 3286 4272848 - 4272802 - g 85 -15 -3.62046 | overlap 4272766 4272783 4272803 4272820 4272846 GCACCTCGGGAAGAA CGCGCTCCACGCGAAGAACGCG CCC CGCGCCCACCACGCGAAGAGCG CCAACCACGCGCTGC TERM 3287 4272849 - 4272803 - g 75 -14.2 -2.77013 | overlap 4272766 4272783 4272802 4272820 4272846 CACCTCGGGAAGAAC GCGCTCCACGCGAAGAACGCGC CCC GCGCCCACCACGCGAAGAGCGC CAACCACGCGCTGCC Pput_3809 4270489 - 4273761 + | ribonuclease TERM 3288 4273783 - 4273808 + T 100 -20.5 -5.72207 | opp_overlap 4273783 AAGCTGAATGAAAAA GCCCCGCCAGT GCGA ACTGGCGGGGC TTTTTTTGGTTTGCC TERM 3289 4273808 - 4273783 - T 100 -20.5 -4.87893 | opp_overlap 4273783 AAGCTGAATGAAAAA GCCCCGCCAGT GCGA ACTGGCGGGGC TTTTTTTGGTTTGCC murB 4275200 - 4274181 - | UDP-N-acetylenolpyruvoylglucosamine reductase Pput_3811 4275661 - 4275197 - | protein tyrosine phosphatase Pput_3812 4276425 - 4275661 - | 3-deoxy-manno-octulosonate cytidylyltransferase Pput_3813 4276607 - 4276422 - | hypothetical protein lpxK 4277653 - 4276652 - | tetraacyldisaccharide 4'-kinase TERM 3290 4276979 - 4276956 - G 76 -13.2 -3.53012 | gap 1 TGGCCGGCGGGGAAA TGGTCGAGCGC ACG GCGCTCG-CCA GTGCGCACGTTGACC TERM 3291 4277682 - 4277649 - G 74 -11.7 -3.53343 | gap 1, overlap 4277650 AAGCGGTCGGCGAAA GCCATCAAGGCGTGCC CTG GGC-CGCCTCGACGGT GGTCATGCGCAACTG TERM 3292 4277681 - 4277650 - G 78 -15.2 -2.71791 | gap 1, overlap 4277649 AGCGGTCGGCGAAAG CCATCAAGGCGTGCC CTG GGC-CGCCTCGACGG TGGTCATGCGCAACT Pput_3815 4278087 - 4277653 - | biopolymer transport protein ExbD/TolR Pput_3816 4278758 - 4278084 - | MotA/TolQ/ExbB proton channel Pput_3817 4281091 - 4278875 - | DNA internalization-related competence protein ComEC/Rec2 TERM 3293 4280198 - 4280184 - G 100 -5.6 -5.54192 | overlap 4280185 AGCAACGGAAAAAAA GCGCCA AGG TGGCGA AAGCGCAGACGCCAG TERM 3294 4280197 - 4280185 - G 74 -9.1 -3.90888 | overlap 4280184 GCAACGGAAAAAAAG CGCCA AGG TGGCG AAAGCGCAGACGCCA TERM 3295 4280923 - 4280905 - G 70 -12.4 -3.24188 | CCAGACGATCATCAA GGGCCTGC TGA GCAGACCC GCACGCCCAACACAA Pput_3819 4282529 - 4281750 - | ABC-2 type transporter Pput_3818 4281234 - 4281866 + | hypothetical protein Pput_3820 4283458 - 4282526 - | ABC transporter related Pput_3821 4284215 - 4283592 - | glutathione S-transferase domain-containing protein TERM 3296 4284999 - 4284979 - g 73 -8.9 -3.97307 | overlap 4284973 4284968 CTGACCGAAGAAGAA CAGGCCTTC ATC GATGGCCCG ACCGAAGCACTGTGC TERM 3297 4286570 - 4286558 - g 79 -9.1 -4.15044 | opp_overlap 4286560 GGGCCGTGGAAGAAA GCCTG GGC CAGGC GGAGCACGCCCTGGA fadE 4284595 - 4287042 + | acyl-CoA dehydrogenase TERM 3298 4287065 - 4287047 - f 74 -13.1 -2.88663 | overlap 4287033 AGGTACGCTGAGACA GGGGCCG TTTTG CGGCCCC TTCCCCAACCGGCGT TERM 3299 4287503 - 4287493 - g 76 -6.8 -4.42386 | opp_overlap 4287481, overlap 4287496 CTGGCATGCACAAAA GCAG GCT CTGC TGGAAGCCGTAAAAA Pput_3823 4287122 - 4287526 + | hypothetical protein Pput_3824 4287605 - 4288231 + | fimbrial protein-like protein Pput_3825 4288287 - 4289024 + | pili assembly chaperone Pput_3826 4290496 - 4289039 - | hypothetical protein TERM 3300 4290554 - 4290534 - R 100 -12.6 -4.83169 | AGGCGGGCACAAAAA GGGGAGGT TCGAT ACCTCCCC GGTTGCAATAGCCCT Pput_3827 4292763 - 4290568 - | outer membrane autotransporter TERM 3301 4292728 - 4292745 + g 77 -2.7 -5.03314 | CACCTTGGCCCGCAC CAACG GCCCCCCG CGTTG TTTTTTCACAATCCC TERM 3302 4292885 - 4292914 + r 77 -11.4 -3.69323 | opp_overlap 4292885 CGTCAACTTCAGAAA GGACGGCGATGG CGCGCT CTATCGCCGCCC TTTCACTGCTCATGG TERM 3303 4292914 - 4292885 - R 83 -11.4 -3.92522 | opp_overlap 4292885 CGTCAACTTCAGAAA GGACGGCGATGG CGCGCT CTATCGCCGCCC TTTCACTGCTCATGG Pput_3828 4294933 - 4292924 - | hypothetical protein TERM 3304 4293985 - 4294010 + g 77 -12.7 -3.60792 | GCGTCCCCCATGTCA CTTCAAGCTCA TCCG TGGGCTTGAAG TTTGAAAATTCAGGG TERM 3305 4295014 - 4295043 + r 75 -9.3 -4.08945 | opp_overlap 4295021, overlap 4295015 AAGCGTAACCCCCCA TCGACAACTGACA AAAA TGTCAGTTGACGC TTTTACAAAGATGCT TERM 3306 4295015 - 4295042 + r 75 -12.8 -3.05046 | opp_overlap 4295021, overlap 4295014 AGCGTAACCCCCCAT CGACAACTGACA AAAA TGTCAGTTGACG CTTTTACAAAGATGC TERM 3307 4295076 - 4295101 + r 100 -16.3 -4.18018 | opp_overlap 4295076 TTTCAAACGTAAAAA TCCGATACCAG AGGA CTGGTATCGGA TTTTCCATAAAGCCC TERM 3308 4295101 - 4295076 - R 100 -16.3 -4.81249 | opp_overlap 4295076 TTTCAAACGTAAAAA TCCGATACCAG AGGA CTGGTATCGGA TTTTCCATAAAGCCC Pput_3829 4299079 - 4295234 - | YD repeat-/RHS repeat-containing protein TERM 3309 4296735 - 4296747 + g 71 -5.5 -4.29227 | GCTGATTCTTGCGTG CCGAT CGG GTCGG TTTGTTCATGGTTGC TERM 3310 4297082 - 4297116 + g 83 -12.8 -3.85389 | overlap 4297081 4297083 4297108 ATGGTAGCTGTACTC GCGTTTCGCCGTGTAC TCG GTACCCGGCGCAACGG TTTCGCTTGTTACGC TERM 3311 4297083 - 4297115 + g 83 -16.3 -2.90751 | overlap 4297081 4297082 4297108 TGGTAGCTGTACTCG CGTTTCGCCGTGTAC TCG GTACCCGGCGCAACG GTTTCGCTTGTTACG TERM 3312 4299109 - 4299128 + r 86 -15 -3.30701 | overlap 4299104 CGATAATTGGGGTGC GTCGCCCG CGAA CGGGCGAC TTGGCTTTACTGCCC Pput_3830 4301966 - 4299135 - | hypothetical protein Pput_3831 4304404 - 4301969 - | hypothetical protein TERM 3313 4302558 - 4302578 + g 78 -15.5 -2.71483 | AGGTAAGTGCGGGGT TTCGCCGGA GGC TCCGGCGAA TAATTGGCGACCTGT Pput_3832 4306386 - 4304578 - | hypothetical protein TERM 3314 4305112 - 4305095 - G 81 -2.6 -5.14563 | opp_overlap 4305103, overlap 4305097 GCCGGGATGAAAAAA CGCAGC GGGTCG GCTGTG CTCGCCGGCTCCTTG TERM 3315 4306071 - 4306051 - G 71 -5.3 -4.39166 | overlap 4306053 4306063 CCCCACATAGCAAAA CTGCCGAAG TGA CTCCAGCGG GTTGCCGCCGGATGG Pput_3833 4306744 - 4307151 + | hypothetical protein TERM 3316 4309758 - 4309743 - g 71 -4.6 -4.431 | GACGCATGTACAAAA CCGTGC GCCC GAACGG TAGCGCGCTGCTGCG Pput_3834 4307156 - 4312327 + | YD repeat-containing protein TERM 3317 4312379 - 4312353 - f 100 -22.4 -3.35992 | overlap 4312372 ACTGACCCCAACCAA GTTCCCGCTGCG CAA CGCAGCGGGAAC CTTCCCACAATGCAT Pput_3835 4312598 - 4315171 + | fimbrial biogenesis outer membrane usher protein Pput_3836 4315171 - 4316259 + | fimbrial protein-like protein TERM 3318 4316321 - 4316353 + F 90 -16.5 -3.27525 | opp_overlap 4316330, overlap 4316330 GGGTGAAATCGAGAC GAAAAAAAAGGGACC TGA GGTCCCTTTTTTATC TTACGTTTGGAGCGG TERM 3319 4316344 - 4316330 - f 100 -11.4 -5.90981 | opp_overlap 4316330 4316321 CGAGACGAAAAAAAA GGGACC TGA GGTCCC TTTTTTATCTTACGT TERM 3320 4316330 - 4316344 + F 100 -11.4 -5.48063 | opp_overlap 4316330, overlap 4316321 CGAGACGAAAAAAAA GGGACC TGA GGTCCC TTTTTTATCTTACGT TERM 3321 4317816 - 4317790 - g 100 -13.6 -4.57073 | overlap 4317765 CAGGCCCTGCAAAAA GGCCAGCCCGGC CAG GCGCGGCTGGCC TTCGAGCGCGGCGTG Pput_3837 4317181 - 4318023 + | hypothetical protein Pput_3838 4318581 - 4318099 - | GAF domain-containing protein Pput_3839 4319469 - 4318582 - | hypothetical protein Pput_3840 4319674 - 4322031 + | histidine kinase Pput_3841 4322509 - 4322021 - | glutathione peroxidase Pput_3842 4322918 - 4322523 - | methionine sulfoxide reductase B TERM 3322 4322996 - 4323024 + H 70 -12.4 -2.51966 | overlap 4322995 TATATTAGTTGGCTT CGTGTGCCAGGC GTTCA GTCTGGCACCCG CTTCCTGCCCTTTCA TERM 3323 4323369 - 4323351 - g 74 -5.2 -4.59342 | GCCAGCAGAAAGAAA TCGAAGGC GTC ACCATCGA GGACATCTACCTGGG Pput_3843 4323086 - 4324297 + | aminotransferase AlaT Pput_3844 4324590 - 4325477 + | heat shock protein HtpX TERM 3324 4325496 - 4325513 + T 100 -12.7 -5.4505 | opp_overlap 4325496 ACCTGAGAAAACAAA GGGCGAC TTCG GTCGCCC TTTTTTATTCCCGGC TERM 3325 4325513 - 4325496 - T 100 -12.7 -4.77775 | opp_overlap 4325496 ACCTGAGAAAACAAA GGGCGAC TTCG GTCGCCC TTTTTTATTCCCGGC Pput_3845 4326304 - 4325654 - | thiopurine S-methyltransferase TERM 3326 4326577 - 4326545 - g 77 -13.3 -3.59738 | CAGCACACTGGGAAA GCCGCGAGCTGCTGG TCA CCGGCAGCGCACAGC CCGAAACCTGGCATG Pput_3846 4326406 - 4327173 + | extradiol ring-cleavage dioxygenase III subunit B TERM 3327 4327276 - 4327295 + T 95 -9.2 -5.26875 | opp_overlap 4327276 TACTGGCAAAAAAAA TCCCCGAC CTAA GCCGGGGA TTTTTTCGTTACGCC TERM 3328 4327295 - 4327276 - T 100 -11.4 -5.76949 | opp_overlap 4327276 TACTGGCAAAAAAAA TCCCCGAC CTAA GCCGGGGA TTTTTTCGTTACGCC Pput_3847 4328994 - 4327315 - | DEAD/DEAH box helicase domain-containing protein TERM 3329 4328513 - 4328559 + g 75 -4.5 -4.72272 | gap 2, overlap 4328514 AAGCCCAGCTTCAGC ATCTCGTCGGCTTCGTCCAGTAC CAG GTACTGTACG--GTCGACAAGAC TTTTTCGTCACGACG Pput_3848 4330131 - 4329346 - | hypothetical protein TERM 3330 4330484 - 4330458 - g 74 -5 -4.56597 | opp_overlap 4330465, overlap 4330459 TCTCGGCTGCAAAAA TCCGCGACACCT TCA AGGTGTTGCTGC AAATGGCCATTGTCA Pput_3849 4330217 - 4331563 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3331 4331557 - 4331567 + T 79 -8.2 -4.44277 | CCTCAAGCAGGTACG GCGC TGA GCGC TTTTCGCTTTTGATC Pput_3850 4333160 - 4332942 - | hypothetical protein Pput_3851 4333257 - 4334108 + | LysR family transcriptional regulator Pput_3852 4334922 - 4334137 - | hypothetical protein TERM 3332 4334960 - 4334976 + H 82 -8 -4.56597 | opp_overlap 4334931 4334950 4334959, overlap 4334957 GGAAACGCACAGCAG CGCACA ATGGC TGTGCG TTTTTCGCAAAAGCA Pput_3853 4335000 - 4335953 + | LysR family transcriptional regulator Pput_3854 4336012 - 4336467 + | MarR family transcriptional regulator Pput_3855 4336608 - 4337036 + | OsmC family protein TERM 3333 4337076 - 4337046 - T 74 -12.5 -2.76261 | gap 1, opp_overlap 4337049, overlap 4337045 GTCTAAGGCGCAAAG GC-TGGCCGCCCCC CAGT GGGAGCGGCCTTGC GTCGCGAACGGGGCG TERM 3334 4337049 - 4337072 + T 83 -15.2 -3.05384 | opp_overlap 4337045 4337046 TAAGGCGCAAAGGCT GGCCGCCCCC CAGT GGGAGCGGCC TTGCGTCGCGAACGG TERM 3335 4337177 - 4337128 - T 89 -12.7 -3.92869 | GCATGTAGGCAGAAA TTGCCGGGGCCGCCTTGCGGCCC TAAC GCGACGCAAGGCCGCTCCCACAA AAGCGCGAGCACAAG TERM 3336 4337199 - 4337180 - T 88 -10.6 -4.36914 | GCCGCTCCCACAAAA GCGCGAGC ACAA GCACGCGC TGAGGATTGGGAAAG TERM 3337 4337231 - 4337246 + T 100 -11.8 -5.1287 | opp_overlap 4337231, overlap 4337245 ACAGGCATAAAAAAA CCCGGC TTGC GCCGGG TTTTTTGCGTCTCGC TERM 3338 4337246 - 4337231 - T 100 -11.8 -5.65177 | opp_overlap 4337231 4337245 ACAGGCATAAAAAAA CCCGGC TTGC GCCGGG TTTTTTGCGTCTCGC Pput_3856 4337839 - 4337270 - | elongation factor P Pput_3857 4339021 - 4337888 - | hypothetical protein TERM 3339 4338518 - 4338506 - G 78 -6.9 -4.57341 | overlap 4338493 4338510 AAGCCCCTGCAAAAA GGCAC GGC GCGCC TCCGCCGACTGCTGG TERM 3340 4338645 - 4338611 - G 78 -2.9 -5.06816 | gap 2, overlap 4338613 ACCCGGGAAGAAAAA TACCTT-G-CGCAAACC GTT GGGCTGCGGCGAAGGCA AACCATGGCAACCCT TERM 3341 4339110 - 4339083 - H 73 -5.5 -4.52589 | TTGGCGCAGACAAAA GCACCTGCGCA GAAAAA TGCCCAAGCGC ATGCGACAATGCCCC Pput_3858 4339255 - 4340031 + | GreA/GreB family elongation factor Pput_3859 4341084 - 4340146 - | LysR family transcriptional regulator fabG 4341203 - 4341952 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 3342 4341959 - 4341996 + T 100 -15 -4.03234 | gap 2, opp_overlap 4341958 GCAGCCTGATTGAAC GGTT-GCCTGTGCC-GCG ACAA CGCCGGCACAGGCTAGCC TTTCTGTGCCCCCAG Pput_3861 4342875 - 4341991 - | LysR family transcriptional regulator Pput_3862 4342982 - 4344169 + | major facilitator transporter TERM 3343 4344567 - 4344624 + G 71 -13.3 -3.05384 | gap 1, opp_overlap 4344543, overlap 4344572 TGGCAGCGCCTTGGG CTGGGGCGTGGCCGGC-GCCCTGGTGGC AGG GCCAGTAGGGCTGCTGGCCGGGCTGTGG TTGGGTGGCAAGGAA TERM 3344 4344572 - 4344619 + G 90 -18.4 -2.92192 | gap 1, overlap 4344567 GCGCCTTGGGCTGGG GCGTGGCCGGC-GCCCTGGTGGC AGG GCCAGTAGGGCTGCTGGCCGGGC TGTGGTTGGGTGGCA Pput_3863 4344385 - 4344765 + | hypothetical protein TERM 3345 4344801 - 4344821 + F 79 -6.8 -4.74132 | TCGTTTTATGTAGAG GGCGGC TGGTAAGAT GCCGCC TTTTTCATGGCCTGT Pput_3864 4345070 - 4347202 + | TonB-dependent siderophore receptor TERM 3346 4347210 - 4347226 + F 88 -15.1 -3.53012 | GCTTCTAGATTGCCG GGGCCGC TCT GCGGCCC TTTCGCGACACAAGG TERM 3347 4347256 - 4347309 + F 85 -16.1 -3.12847 | overlap 4347264 4347274 GCCGCTCCCACAGGT GTGGACTGCCCCCAAGGGGTTGGAT TGGT GTCCAACTTCTTGGGAGCACTCCAA TTGCCTGTGGGCCTT TERM 3348 4347352 - 4347336 - f 82 -13.7 -3.53012 | CCTTGTGTCGCGAAA GGGCTGC ACA GCAGCCC CGGGATTTCAGCGTC TERM 3349 4347384 - 4347400 + F 88 -15.1 -3.53012 | opp_overlap 4347378 4347376 GTGCAAATAGTGCTG GGGCCGC TTC GCGGCCC TTTCGCGACACAAGC TERM 3350 4347684 - 4347647 - f 100 -22.1 -4.11371 | opp_overlap 4347651, overlap 4347651 CAATAGCCTTGAAAA CAAAGAGCCCCCGTGCT TTTC AGCGCGGGGGCTCTTCG TAGAATGTGGCGGTG TERM 3351 4347651 - 4347680 + F 100 -21.5 -3.17763 | opp_overlap 4347647 4347651 AGCCTTGAAAACAAA GAGCCCCCGTGCT TTTC AGCGCGGGGGCTC TTCGTAGAATGTGGC TERM 3352 4347680 - 4347651 - f 100 -19.3 -4.65263 | opp_overlap 4347651, overlap 4347647 AGCCTTGAAAACAAA GAGCCCCCGTGCT TTTC AGCGCGGGGGCTC TTCGTAGAATGTGGC Pput_3865 4347980 - 4348669 + | enoyl-CoA hydratase TERM 3353 4348814 - 4348826 + G 73 -3.3 -4.68103 | overlap 4348809 CATTGCGTATGTTCC TGCTG GGG CTGCA TTTTCTTGCCGTTGG TERM 3354 4349395 - 4349357 - g 71 -13.2 -3.04144 | GCCTGAGCCTGAACA GCTGGC-GCCAGCGCACG GTAAT CGTGCGCTCGCTGCC-GC CCATTGCCACGACGG Pput_3866 4348789 - 4349502 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 3355 4349522 - 4349545 + F 75 -13.2 -3.02144 | GGGTTGCTCTGGAGC CGGGTACAGC CCAA GCTGTATCCG TGTTCAAACGAATAA Pput_3867 4349571 - 4350542 + | Mg2+ transporter protein, CorA family protein Pput_3868 4351317 - 4350583 - | amidotransferase TERM 3356 4351681 - 4351671 - H 73 -8.2 -4.15654 | opp_overlap 4351670 GAATAACAACAAGAA GGCG GTC CGCC ATGTTCAGACAATCG TERM 3357 4352550 - 4352529 - g 100 -17.3 -3.57462 | TACGCGACCCGCAAA GCCTGCGGC GGTG GCCGCAGGC GAAGATGCCGGGGTT Pput_3869 4351844 - 4352644 + | hypothetical protein Pput_3870 4353241 - 4352909 - | hypothetical protein Pput_3871 4353652 - 4353416 - | hypothetical protein Pput_3872 4355916 - 4353859 - | sulfatase Pput_3873 4356247 - 4356056 - | hypothetical protein TERM 3358 4356539 - 4356580 + G 71 -11 -3.53012 | gap 3, opp_overlap 4356547 GTGAACGGCGACCAT GCC-GACAACCTGCACCTGGC CAT GCT-GG-GCGGGTTGTCCGGC TTTGGCGCCACCGCA TERM 3359 4356657 - 4356694 + G 73 -6.9 -4.27686 | gap 1, overlap 4356642 4356658 4356679 CCCAGGACGTGATGC TGGGCTTTGCTGCCGGCA TGA TGCTGGCCGCC-AGCTCG TTTTCGCTGATTTTG Pput_3874 4356374 - 4357312 + | zinc/iron permease TERM 3360 4357350 - 4357408 + T 70 -9.5 -3.48276 | CCTCTTCGCGGGCTC GCCCGCTCCCACAGGGATATCACAG GGCCTGATG CGGTGGAGTATCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 3361 4357438 - 4357422 - T 88 -15.1 -3.53012 | opp_overlap 4357418 4357417 4357435 CCTTGTGTCGCGAAA GGGCCGC GAA GCGGCCC CGGCATTATTTGCAT TERM 3362 4357470 - 4357486 + T 82 -13.7 -3.53012 | overlap 4357435 GACGCTGAAATCCCG GGGCTGC TGT GCAGCCC TTTCGCGACACAAGG Pput_3875 4358106 - 4357576 - | hypothetical protein Pput_3876 4358691 - 4358167 - | ankyrin Pput_3877 4358958 - 4359230 + | hypothetical protein Pput_3878 4359890 - 4359354 - | hypothetical protein Pput_3879 4361044 - 4359890 - | major facilitator transporter TERM 3363 4361105 - 4361163 + r 85 -12.6 -3.85817 | gap 1, opp_overlap 4361111, overlap 4361106 CGCTCCTACATGGGG -ATATCACCGCCCTCAGGTGCAGTG ACAGGGATAC CACAGGACCTGAGGGCGGTGAAATC TTTATAGGCGCGGGT TERM 3364 4361106 - 4361161 + r 95 -17.7 -3.51934 | opp_overlap 4361111, overlap 4361105 GCTCCTACATGGGGA TATCACCGCCCTCAGGTGCAGTG ACAGGGATAC CACAGGACCTGAGGGCGGTGAAA TCTTTATAGGCGCGG TERM 3365 4361156 - 4361111 - R 100 -20.5 -2.63301 | opp_overlap 4361106 4361105 TACATGGGGATATCA CCGCCCTCAGGTGCAGTGACA GGGA TACCACAGGACCTGAGGGCGG TGAAATCTTTATAGG Pput_3880 4362299 - 4361208 - | chorismate synthase TERM 3366 4361530 - 4361569 + g 85 -15 -3.54459 | gap 1 AGTTCGTCCCGGTGC TCGGTGCCGCGCTGGGCCA CAC TGGCGAAGC-CGGCGCCGA TTTCCACGCCCTTGA TERM 3367 4362761 - 4362745 - g 73 -10.8 -3.65046 | CCGCGACGGCAACAA CCCGGC GTCGG GCCGGG TCGACAACCTGAAGC Pput_3881 4362539 - 4363501 + | alpha/beta hydrolase fold TERM 3368 4363566 - 4363508 - f 100 -16.9 -3.75153 | overlap 4363510 TCGGCGTAAGTCAAA CAGG-CTCAGGTCTCAGCCATGCCTGCCG ATA CAGCAGGCATAGCTGAGGAC-AAGCCCTG ATGACCACCTCCCCC TERM 3369 4363563 - 4363510 - f 100 -19.7 -3.46068 | gap 1, overlap 4363508 GGCGTAAGTCAAACA GGCTCAGGTCTCAGCCATGCCTGCCG ATA CAGCAGGCATAGCTGAGGAC-AAGCC CTGATGACCACCTCC TERM 3370 4363703 - 4363715 + G 76 -6.9 -4.42788 | overlap 4363694 ACCGCAGCACCGGCG CGCGG CCG CTGCG TTTTGTGCAGTTCGG Pput_3882 4363567 - 4364349 + | hypothetical protein Pput_3883 4364622 - 4365572 + | transposase, IS111A/IS1328/IS1533 Pput_3884 4366697 - 4365789 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Pput_3885 4366879 - 4367469 + | isochorismatase hydrolase Pput_3886 4367555 - 4367875 + | hypothetical protein TERM 3371 4367938 - 4367922 - f 88 -15.1 -3.53012 | opp_overlap 4367895, overlap 4367932 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CGGCAATTCATGCAG Pput_3887 4368439 - 4368999 + | Smr protein/MutS2 TERM 3372 4368981 - 4369039 + F 72 -3.7 -4.77925 | opp_overlap 4369000 4369001, overlap 4369037 GAAGCGAACCATGCT CGAAGGCCGCGACGAGT-AACGCCGCGCT TGC AGCGCCGCCCTCAC-CGCCGTACCCTTCG TTTTTGCGATTTTTT TERM 3373 4369037 - 4369048 + F 72 -2.2 -5.00884 | overlap 4368981 TCACCGCCGTACCCT TCGT TTTT GCGA TTTTTTCCCACAGGT folE 4369070 - 4369615 + | GTP cyclohydrolase I TERM 3374 4369633 - 4369652 + F 100 -15 -4.35524 | GGTTGCTGACCCCAA GCCGACCC TTCA GGGTCGGC TTTTGCATTTCAGGA Pput_3889 4369675 - 4370046 + | glutaredoxin Pput_3890 4370787 - 4370185 - | glutathione S-transferase domain-containing protein TERM 3375 4370514 - 4370503 - G 76 -5.8 -4.57569 | GTACTGCTCGAAAAA CTGC CACT GCAG CACCTGGGTACGCAG TERM 3376 4371386 - 4371420 + G 73 -11.5 -3.67558 | gap 2, opp_overlap 4371365, overlap 4371387 4371388 GCGAAATCTTCGTGG C-CGCCCAGCACC-GCA CGT TGCTGGTGCTGGGCATG TTCTTCAGCTATCTG TERM 3377 4371387 - 4371418 + G 85 -15.2 -3.41325 | gap 1, opp_overlap 4371365, overlap 4371386 4371388 CGAAATCTTCGTGGC CGCCCAGCACC-GCA CGT TGCTGGTGCTGGGCA TGTTCTTCAGCTATC TERM 3378 4371388 - 4371417 + G 87 -18.7 -2.64313 | gap 1, opp_overlap 4371365, overlap 4371387 4371386 GAAATCTTCGTGGCC GCCCAGCACC-GCA CGT TGCTGGTGCTGGGC ATGTTCTTCAGCTAT Pput_3891 4370932 - 4372122 + | benzoate transporter Pput_3892 4374159 - 4372219 - | methyl-accepting chemotaxis sensory transducer TERM 3379 4373290 - 4373244 - G 72 -11.6 -3.33315 | gap 1, overlap 4373220 4373282 CCAACACGCCTACAA GCAGCGCCAGCGCCGTGGCCA GGCCGA TGGCCAAGGCATT-ACGCTGC AGCTCGCCCTGTAGG Pput_3893 4374565 - 4375308 + | hypothetical protein TERM 3380 4375308 - 4375333 + T 85 -16.1 -3.14132 | AGGCGTCAGCTTTTA GCCGGGTGGCC GGCT GGCTGCCCGGC TTGCTCAGAACGGAC Pput_3894 4376213 - 4375452 - | short chain dehydrogenase Pput_3895 4376391 - 4377392 + | alcohol dehydrogenase Pput_3896 4378464 - 4377763 - | orotidine 5'-phosphate decarboxylase Pput_3897 4378648 - 4378815 + | hypothetical protein TERM 3381 4378904 - 4378873 - T 87 -12.2 -4.03234 | gap 1, opp_overlap 4378875 TTCCCGGCACACAAA GGC-CGGGCCAGGGC ATC ACCCCGGCCCCTGCC CGCTTACTCCACCAT Pput_3898 4379243 - 4378908 - | helix-hairpin-helix repeat-containing competence protein ComEA Pput_3899 4380047 - 4380322 + | hypothetical protein TERM 3382 4380392 - 4380376 - T 77 -8 -4.33417 | TGCAGTCAGAAGAAA TGGGCT TCATC AGCCCA GACATGGCGAGGGCA Pput_3900 4381351 - 4380521 - | hypothetical protein Pput_3901 4382237 - 4381647 - | hexapaptide repeat-containing transferase TERM 3383 4382455 - 4382471 + H 72 -3.6 -4.81249 | overlap 4382456 AACGACGATTCTATA GCTCGC TCAGC GCGAGA TTTTTACCTTTGAGA TERM 3384 4383036 - 4383025 - H 71 -7.2 -4.19258 | ATATCCGAGTGAAAA CGCC ACAC GGCG CACCTTCCTGAAAGA TERM 3385 4383368 - 4383382 + G 81 -7.1 -4.70659 | overlap 4383366 TGATGGATAGCCTGC GCGAG AACCG CTCGC TTTTTGGCTATAAGC Pput_3902 4383205 - 4383891 + | ABC-2 type transporter Pput_3903 4383905 - 4384558 + | ABC transporter related Pput_3904 4384613 - 4385719 + | lipopolysaccharide biosynthesis protein TERM 3386 4385965 - 4385985 + G 76 -7.5 -4.2828 | CGGAGGTGCGCCTAG CAGCAGGAG ATA CTCTGGCTG TTTTGATCGCTGACA Pput_3905 4385739 - 4386803 + | polysaccharide export protein Pput_3906 4386920 - 4389424 + | capsule polysaccharide biosynthesis protein TERM 3387 4389459 - 4389430 - f 100 -16.5 -5.55698 | opp_overlap 4389432, overlap 4389432 GACAATGTAAAAAAA TACAGCCTCCCTC AATA GAGGGAGGCTGTT TTTGCGCTGCGTTCT TERM 3388 4389432 - 4389457 + F 100 -19.1 -4.63184 | opp_overlap 4389430 4389432 CAATGTAAAAAAATA CAGCCTCCCTC AATA GAGGGAGGCTG TTTTTGCGCTGCGTT TERM 3389 4389457 - 4389432 - f 100 -19.1 -4.40173 | opp_overlap 4389432, overlap 4389430 CAATGTAAAAAAATA CAGCCTCCCTC AATA GAGGGAGGCTG TTTTTGCGCTGCGTT TERM 3390 4389806 - 4389790 - f 79 -10.9 -3.87149 | overlap 4389784 GTTATTAAACTCAAA GCCATCT CTA AGATGGC AGGACGCCTGAGGCA TERM 3391 4389988 - 4389978 - g 91 -3.2 -5.43621 | AGAAATCACAAAAAA GCCT GTC AAGC ATGTATTTGGAAACA TERM 3392 4390050 - 4390030 - g 71 -8.4 -3.92373 | overlap 4390049 GACGCCATCGAGAAA GCACTTAT AGAAA ATAAGTGC GACATGGTCATTCAC Pput_3907 4389826 - 4390836 + | UDP-glucose 4-epimerase Pput_3908 4390886 - 4391728 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 3393 4392846 - 4392859 + G 75 -4.5 -4.75288 | CGACTTACCGGCATT TTCCG CATG CGGGA TTTCTTTTGCTGTGG Pput_3909 4391758 - 4393044 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 3394 4393081 - 4393048 - T 79 -12.5 -3.51032 | opp_overlap 4393052 ATGGCGCAATGATAA GTAAGGGCGACAAGA TGCA TCTTTTCGCCCTTGC TTGACGAATCAGTCA TERM 3395 4393052 - 4393077 + T 77 -11.9 -3.34344 | opp_overlap 4393048 CGCAATGATAAGTAA GGGCGACAAGA TGCA TCTTTTCGCCC TTGCTTGACGAATCA Pput_3910 4394022 - 4393090 - | KpsF/GutQ family protein TERM 3396 4393826 - 4393816 - G 72 -2.4 -4.72272 | CGGGTGCAGGAAAAA GCTC GGG GTGC CAGTGGATGCGAAGG TERM 3397 4393854 - 4393872 + g 70 -10.3 -3.57144 | AGGTGGCGACCATCT TCTGGCC GATCA GGCCAGA TTTACCCATGCCGCA TERM 3398 4395249 - 4395296 + G 76 -6.2 -4.60041 | gap 1 GCGCTGGCGCAACTC GGCCTTGAAGACGAACGCTTTGC CGG GCTAGCTGAGCG-CTTCAAGGCC TTTTTACCAGTGACT Pput_3911 4394664 - 4395722 + | hypothetical protein TERM 3399 4397207 - 4397238 + GF 72 -10.8 -3.42996 | gap 1, overlap 4397214 ACGGCTTTCTGCGCT CGGTCG-GCCTGGGC GCC GGCAAGGCGCGACCG TTGTCGTGGGTGGTC Pput_3912 4396024 - 4398045 + | capsule polysaccharide biosynthesis protein Pput_3913 4397985 - 4399304 + | capsule polysaccharide biosynthesis protein Pput_3914 4399301 - 4400077 + | short-chain dehydrogenase/reductase SDR Pput_3915 4400085 - 4401632 + | sulfatase Pput_3916 4401637 - 4402203 + | GCN5-related N-acetyltransferase TERM 3400 4402484 - 4402496 + G 74 -2.6 -4.82333 | overlap 4402483 GCTGCCCTACATTGC GCTG GAAGA CGGC TTTTTGCGTTCTTCT Pput_3917 4402203 - 4404347 + | capsule polysaccharide biosynthesis protein TERM 3401 4404901 - 4404917 + G 70 -7.9 -4.06687 | CCGACACCTTCCACC CCACGGC GAA GGCGTGG TTGTTTCTGGACGAT Pput_3918 4404351 - 4405394 + | phytanoyl-CoA dioxygenase Pput_3919 4406498 - 4406953 + | hypothetical protein Pput_3920 4408315 - 4406963 - | 8-amino-7-oxononanoate synthase TERM 3402 4407080 - 4407047 - G 100 -3.7 -5.47431 | gap 1, overlap 4407048 4407049 GCAAGACACAAAAAA CCGCACCCGCGCCGAA TGC TCCGGCACCGCCG-GG TACAGGATCGGCTGG Pput_3921 4415824 - 4408325 - | Beta-ketoacyl synthase-like protein TERM 3403 4412262 - 4412248 - G 74 -12.8 -3.39327 | GCTGCACAGGCACAA CCGCGC CTG GCGCGG CCTGCCCCACATGGC Pput_3922 4416478 - 4417404 + | glycosyl transferase family protein Pput_3923 4417908 - 4418453 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 3404 4418560 - 4418515 - g 74 -4.6 -4.57073 | gap 1, overlap 4418516 CAGCCTCTGGAAAAA CCGGTCGCTGATCTCGCAGAT GACCA AGC-GCGAGGTCATCGGCCGA TATCGAGGATCGGTA TERM 3405 4418807 - 4418795 - g 83 -4.8 -5.07053 | opp_overlap 4418801 AACTACGTGAAAAAA GTGG TATTC CCAC TGGAGATTCTGCCGG Pput_3924 4418453 - 4419280 + | ABC-2 type transporter TERM 3406 4420080 - 4420070 - g 73 -6.8 -4.25104 | overlap 4420071 TGGGTTGGAGCAAAA CGCT CAA AGCG CTTCCACCGAGTCAG Pput_3925 4419270 - 4420619 + | ABC transporter related Pput_3926 4420626 - 4425155 + | glycosyl transferase family protein TERM 3407 4425219 - 4425240 + G 78 -14.5 -3.09492 | CTAATCGCTCTCTGC GCAGCCCTA ATTG TAGGGCTGC TCTTGGAGTTCACCC TERM 3408 4426466 - 4426446 - g 83 -7.5 -4.59342 | opp_overlap 4426446, overlap 4426450 GCCATCATAAACAAA GCTAGCCAG CAC CTGGCGAAC TCCTTCAGCCCTTAC TERM 3409 4426663 - 4426677 + G 74 -4.9 -4.67038 | GCCAAGTTAGAGGAC GCGCT ACTCC GGCGC TTTTAATTTTCACAC Pput_3927 4425174 - 4427303 + | hypothetical protein Pput_3928 4427318 - 4428427 + | DegT/DnrJ/EryC1/StrS aminotransferase Pput_3929 4428430 - 4429371 + | glycosyl transferase family protein Pput_3930 4429361 - 4430314 + | WxcM domain-containing protein Pput_3931 4430319 - 4430708 + | GtrA family protein Pput_3932 4431842 - 4430922 - | glycosyl transferase family protein TERM 3410 4431784 - 4431758 - G 74 -12.3 -3.53224 | CATTGGTTTGCGAAA GGATCGAGGCG AGTTG CTCCTCGATCC AAGACATTCCGTTGT Pput_3933 4432769 - 4431879 - | glucose-1-phosphate thymidylyltransferase TERM 3411 4431917 - 4431930 + g 75 -3.8 -4.69622 | ACTTTTTCAGGTACT GACC ATAGCC GGTC TTTTTCAGCTTCTCT TERM 3412 4432066 - 4432051 - G 72 -2.6 -4.71828 | gap 1, overlap 4432052 4432053 ATTGTATGAACAAAA TGGCTAG CCT CTAGC-A GCGACTCATGGGTGC TERM 3413 4432292 - 4432302 + g 74 -2.4 -4.87786 | TTTCCTCAATGCTAA GGGC GCG GCCA TTTTTGTCGAATTCA Pput_3934 4433671 - 4432766 - | dTDP-4-dehydrorhamnose reductase Pput_3935 4434744 - 4433668 - | dTDP-glucose 4,6-dehydratase Pput_3936 4437017 - 4435005 - | polysaccharide biosynthesis protein CapD TERM 3414 4435650 - 4435675 + g 85 -10.5 -4.30576 | opp_overlap 4435651, overlap 4435651 CATTTCACGACTCAA AGCTTGCAGAA TCAT TTCTGCAAGCC TTTTGCTGCTGCCCA TERM 3415 4435674 - 4435651 - G 84 -14 -3.68529 | opp_overlap 4435651 4435650 ATTTCACGACTCAAA GCTTGCAGAA TCAT TTCTGCAAGC CTTTTGCTGCTGCCC TERM 3416 4435651 - 4435674 + g 76 -14 -3.18024 | opp_overlap 4435651, overlap 4435650 ATTTCACGACTCAAA GCTTGCAGAA TCAT TTCTGCAAGC CTTTTGCTGCTGCCC TERM 3417 4436471 - 4436434 - G 71 -9.7 -3.73224 | opp_overlap 4436467 TCATCGTCGAGGAAA GCCACCGGGCGCATCAG ACGG CCCATGCGCAAGGCGGC CAGTAATTGGTTGCC Pput_3937 4438243 - 4437101 - | glycosyl transferase family protein Pput_3938 4439272 - 4438328 - | NAD-dependent epimerase/dehydratase Pput_3939 4440837 - 4439407 - | beta-lactamase domain-containing protein TERM 3418 4440178 - 4440227 + g 79 -13.5 -3.53012 | gap 1, overlap 4440179 4440181 GATGGCGTTTTCCAG CCGCTGACGGCGGTCGCCTGC-CT GTG GGTGCAGGCGGTCGCCGTAGGTGC TTTCCAGCACCAGCA TERM 3419 4440179 - 4440226 + g 84 -17 -2.71712 | gap 1, overlap 4440178 4440181 ATGGCGTTTTCCAGC CGCTGACGGCGGTCGCCTGC-CT GTG GGTGCAGGCGGTCGCCGTAGGTG CTTTCCAGCACCAGC TERM 3420 4440181 - 4440224 + g 83 -16 -2.90496 | gap 1, overlap 4440179 4440178 GGCGTTTTCCAGCCG CTGACGGCGGTCGCCTGC-CT GTG GGTGCAGGCGGTCGCCGTAGG TGCTTTCCAGCACCA Pput_3940 4441203 - 4440940 - | hypothetical protein ihfB 4441521 - 4441225 - | integration host factor subunit beta TERM 3421 4441632 - 4441621 - R 95 -3 -5.8187 | overlap 4441628 GACTTAATAAAAAAA TTCA AGAT TGAA GTAATTCAAGAATGG TERM 3422 4442088 - 4442107 + r 100 -15 -4.59773 | opp_overlap 4442088 CCGAGCATAAAAAAA GGGCGACC CGAG GGTCGCCC TTTTTACCGATCAAA TERM 3423 4442107 - 4442088 - R 100 -15 -5.67063 | opp_overlap 4442088 CCGAGCATAAAAAAA GGGCGACC CGAG GGTCGCCC TTTTTACCGATCAAA rpsA 4443805 - 4442129 - | 30S ribosomal protein S1 TERM 3424 4442405 - 4442425 + g 71 -8.9 -3.92542 | overlap 4442399 GTCGGCCAGGGTGAC GATGGCGCC TTT GGCGTCAAC TTCTTTCACGATGCC TERM 3425 4443923 - 4443881 - R 71 -8.5 -3.90112 | TTCGTTTTAAGTAAA GGAAAGCCGGCAGGA CGTTGACTGGTGC CCCTGCCTGCTTTCC TGGCTATCAGATAAG cmk 4444607 - 4443930 - | cytidylate kinase Pput_3944 4446853 - 4444613 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 3426 4446930 - 4446969 + r 95 -17.2 -3.49475 | gap 1, opp_overlap 4446930 CCCATCGCGACACAA GGCCGCTCCCACA-ATGCG CTA CACCTGTGTGGGAGCGGCC TTGTGTCGCGATGGG TERM 3427 4446969 - 4446930 - R 100 -19.4 -3.49475 | gap 1, opp_overlap 4446930 CCCATCGCGACACAA GGCCGCTCCCACA-ATGCG CTA CACCTGTGTGGGAGCGGCC TTGTGTCGCGATGGG Pput_3945 4448106 - 4447012 - | chorismate mutase Pput_3946 4449295 - 4448108 - | phosphoserine aminotransferase TERM 3428 4448908 - 4448918 + g 73 -8.2 -4.07568 | opp_overlap 4448892 4448907 CGGTTTCGATGTAAT CGGC CGT GCCG TTTTCCGGCAGCAGG TERM 3429 4449362 - 4449395 + r 81 -13.1 -3.62478 | opp_overlap 4449368, overlap 4449363 TGCCAGCTGTTATCA GTCAAACGGGGCGAC CTTG GTCGCCCCGTTCGGG TTTCACGCTTGATTA TERM 3430 4449363 - 4449394 + r 86 -16.6 -2.77005 | opp_overlap 4449368, overlap 4449362 GCCAGCTGTTATCAG TCAAACGGGGCGAC CTTG GTCGCCCCGTTCGG GTTTCACGCTTGATT TERM 3431 4449389 - 4449368 - R 100 -17.3 -3.68351 | opp_overlap 4449363 4449362 CTGTTATCAGTCAAA CGGGGCGAC CTTG GTCGCCCCG TTCGGGTTTCACGCT Pput_3947 4452167 - 4449408 - | DNA gyrase subunit A mtnA 4453606 - 4452530 - | methylthioribose-1-phosphate isomerase Pput_3949 4453717 - 4454415 + | 3-demethylubiquinone-9 3-methyltransferase Pput_3950 4454418 - 4455089 + | phosphoglycolate phosphatase Pput_3951 4455187 - 4455927 + | short chain dehydrogenase Pput_3952 4456861 - 4456046 - | hypothetical protein Pput_3953 4459318 - 4456862 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3432 4457238 - 4457196 - G 76 -5.6 -4.56775 | gap 1, opp_overlap 4457200 ATGCCGGCGCAAAAA TCATCGAGCGAGAAACGGC AACCCA GCCCTTTCA-GCTCGTTGA TGAAGCGAATGGCGC TERM 3433 4457881 - 4457867 - G 78 -10 -4.03234 | opp_overlap 4457876 CCCTTTCCATACAAA GTGCAG GCT CTGCAC CATCTGGCGCAGTTG Pput_3954 4461439 - 4459607 - | ABC transporter related TERM 3434 4460555 - 4460528 - G 72 -7.6 -4.10657 | gap 1, overlap 4460530 CGACAGGTCGGAAAA CAGCACGGTCAGC ATG GCCG-CCGCGCGG AAGATGTCGATGCCG TERM 3435 4460581 - 4460610 + g 73 -7.1 -4.27584 | gap 1, opp_overlap 4460581 4460584, overlap 4460584 TGCCGAACTGGAACA GC-AGGCCACTGGC ACG GCCACTGGCATCGC TTTTCCATTGCGAGT Pput_3955 4462064 - 4461432 - | DSBA oxidoreductase Pput_3956 4463000 - 4462068 - | hypothetical protein TERM 3436 4463092 - 4463065 - R 86 -7.6 -4.99638 | gap 1, opp_overlap 4463070, overlap 4463068 4463069 ACAGGTATAGAAAAA GC-ATGGGGGCGC TTT GCGCCCCTTTCGC GACACAAGGCCGCTT TERM 3437 4463070 - 4463086 + r 88 -15.1 -3.53012 | opp_overlap 4463069 4463068 4463065 TATAGAAAAAGCATG GGGGCGC TTT GCGCCCC TTTCGCGACACAAGG TERM 3438 4463158 - 4463100 - R 100 -21.1 -3.48276 | gap 1, opp_overlap 4463100 4463146 CCTTTCGCGACACAA GGCCGCTTCCACAGAGACCGC-GTAACC CGAT GGCTAGTGCGGTTCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 3439 4463100 - 4463158 + r 100 -24.6 -3.48276 | opp_overlap 4463100, overlap 4463146 CCTTTCGCGACACAA GGCCGCTTCCACAGAGACCGCGTAACCC GAT GGCTAGTGCGGTTCCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 3440 4463188 - 4463172 - R 88 -15.1 -3.53012 | opp_overlap 4463146 4463182, overlap 4463182 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CCGGATTTTGCAGGA Pput_3957 4463524 - 4463228 - | BolA family protein Pput_3958 4464059 - 4463535 - | hypothetical protein TERM 3441 4463846 - 4463870 + g 74 -14.9 -2.55351 | overlap 4463830 4463845 CCTGGTAGCTTTCCA GCACCGGCTGC TTG GCGGCCGGGGC CTTGGTCTGGGCGAA Pput_3959 4464214 - 4465608 + | fumarate hydratase Pput_3960 4466922 - 4465705 - | hypothetical protein Pput_3961 4467914 - 4466940 - | hypothetical protein TERM 3442 4468109 - 4468070 - R 100 -22.3 -3.53012 | opp_overlap 4468070 CCTTTCGCGGGTAAA CCCGCTCCTACAAGGGA TCGCGT CCCCCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 3443 4468070 - 4468109 + r 100 -19.4 -3.53012 | opp_overlap 4468070 CCTTTCGCGGGTAAA CCCGCTCCTACAAGGG ATCGCGTC CCCCTGTAGGAGCGGG TTTACCCGCGAAAGG Pput_3962 4469644 - 4468151 - | hypothetical protein TERM 3444 4470203 - 4470221 + G 73 -13.2 -3.15249 | CACCTTCGCCGGTGG CAGGGTCA CCC TGACCCTG TTGATAGGCGATGTG TERM 3445 4471287 - 4471297 + G 73 -6.8 -4.28774 | opp_overlap 4471287 GAGGGTGAACATACA CTGG GCG CCAG TTTTGACTTCCATAG mnmC 4469781 - 4471745 + | 5-methylaminomethyl-2-thiouridine methyltransferase Pput_3964 4471876 - 4473663 + | asparagine synthase (glutamine-hydrolyzing) Pput_3965 4473667 - 4475412 + | glutathione synthase TERM 3446 4475396 - 4475424 + F 79 -6.7 -4.82901 | gap 1 TGCTGTTTCCCCATA GCCG-GCCGTTG GCCTGA CAACTGCTCGGC TTTTTGTGGGAGCGG TERM 3447 4475503 - 4475519 + F 88 -15.1 -3.53012 | overlap 4475499 CTACCGATATTGCCG GGGCCGC TTT GCGGCCC TTTCGCGACACAAGG TERM 3448 4475870 - 4475887 + G 73 -8.4 -4.07568 | GGCCTTGGCGCCCGT CGGCTG CTGGTC CAGCCG TTTTGCCGAAGGCAG Pput_3966 4475583 - 4476767 + | peptidase M42 family protein TERM 3449 4477044 - 4477023 - g 70 -10.2 -3.57144 | opp_overlap 4477038, overlap 4477031 TGTTTGACCTGGAAA GCCAGCAA TGCCAG TTGCTGGC CAAGCATGATGTGCC Pput_3967 4476851 - 4477078 + | hypothetical protein Pput_3968 4477272 - 4477093 - | carbon storage regulator, CsrA Pput_3969 4478202 - 4477393 - | short chain dehydrogenase TERM 3450 4478054 - 4478093 + g 83 -12.9 -3.91911 | opp_overlap 4478044, overlap 4478033 ACGAAGCCGTCGCCA CCGGCCTG-GCGAGCCTGC TCCA GC-GTTTCGCGCAGGCCGG TTTCGTTGACATCGG Pput_3970 4478409 - 4478561 + | hypothetical protein TERM 3451 4478603 - 4478632 + T 77 -12.2 -3.33261 | opp_overlap 4478586 GTCACGTGAGGTGAA TGGCAAGCGGGT CACACC ACCCGGTTGCCA TTCTACAGGTTCGCA Pput_3971 4479798 - 4478635 - | hypothetical protein Pput_3972 4480583 - 4479810 - | hypothetical protein Pput_3973 4483106 - 4480638 - | hypothetical protein TERM 3452 4481174 - 4481200 + g 73 -11.4 -3.60792 | opp_overlap 4481136 4481137 TGCCCCCCATGGCCA GCTTCCCGGCGC CCA GCGCCAGGGTGC TTTCCAGGTTGAGGC TERM 3453 4482982 - 4482957 - G 73 -3.3 -4.70659 | gap 1, opp_overlap 4482972 TGGCACATCGAAAAA GTGCGCCTCGAA GTC TTC-AGGCAAAC GCCCGAATGTATTCA Pput_3974 4483672 - 4483181 - | hypothetical protein TERM 3454 4483326 - 4483343 + g 78 -6.9 -4.56597 | GCGCTCATGACCTCC GTGGGCG TCAA CGCCAAC TTTTTACCCCCAACA TERM 3455 4483569 - 4483554 - G 76 -6.2 -4.65895 | GGGGCCACTGAAAAA TCATTC CCGG GAATGA TCGCCGTCACTGAAA Pput_3975 4484226 - 4483741 - | hypothetical protein TERM 3456 4484362 - 4484332 - R 100 -14.1 -4.4009 | opp_overlap 4484338, overlap 4484338 TCTGACGGCATAAAA TAAAAACGCCCCG ACAGG CGGGGCGTTTTTC AGTGCAGGGGATTGA TERM 3457 4484356 - 4484338 - R 100 -13.1 -5.54907 | opp_overlap 4484338, overlap 4484332 GGCATAAAATAAAAA CGCCCCG ACAGG CGGGGCG TTTTTCAGTGCAGGG TERM 3458 4484338 - 4484356 + r 95 -13.1 -4.65895 | opp_overlap 4484338 4484332 GGCATAAAATAAAAA CGCCCCG ACAGG CGGGGCG TTTTTCAGTGCAGGG actP 4486044 - 4484380 - | acetate permease Pput_3977 4486352 - 4486041 - | hypothetical protein TERM 3459 4486299 - 4486320 + g 74 -5.8 -4.52589 | TTCGCGTTTGGTGAC CAGCTCCT TGAAAC GGGGGCTG TTTTGTATCGAGAGG TERM 3460 4486537 - 4486480 - R 95 -19.9 -2.75825 | opp_overlap 4486490, overlap 4486477 TGCGTAACAAAGTGA TGAGCCGTTCGCGGGTTTACCCGCTCC TGTA GGAGCGGGCAAACCCGCGAAGAAACCC TATGGGCCCTGGAAG Pput_3978 4487417 - 4486557 - | substrate-binding region of ABC-type glycine betaine transport system TERM 3461 4488675 - 4488694 + G 70 -10 -3.54459 | overlap 4488676 4488689 CGATGGCCGCCTTGC TGCTGCCA CTGC TGGCAGCG TTTGGCGCCGCTTGC TERM 3462 4488971 - 4488989 + G 72 -13.8 -2.74038 | overlap 4488968 AGCTTCCCCGGCGCG GCGCTGGC GTT GCCGGCGC TGGTGTATGTGCTGT TERM 3463 4489051 - 4489075 + G 71 -9.1 -3.72027 | GTTGCTGGCGTTCAT CGTCGGCGCCG GGG TGGCGCCGCAG TTGTTCGTGGAAGGT Pput_3979 4487615 - 4489180 + | exo-beta-1 3-glucanase-like protein TERM 3464 4489200 - 4489252 + T 95 -20 -2.73364 | opp_overlap 4489224 4489226, overlap 4489195 GCATATCCCTCGAGC CCGGCGCGTACCTTGTGTGAGCAA GACAG TTGCTCCTACAAGGTACGCGCAGC TGCTTACAATGGGGG Pput_3980 4489621 - 4489256 - | hypothetical protein TERM 3465 4489427 - 4489396 - G 70 -10.1 -3.54424 | CGGCACGCGCGGAAA CGAACTGGGCCAG TAGCGC CAGGCCCAATCCG CCCCAGGCCATGACT Pput_3981 4489812 - 4491110 + | hypothetical protein Pput_3982 4491103 - 4491930 + | VacJ family lipoprotein Pput_3983 4493166 - 4492018 - | patatin TERM 3466 4492913 - 4492879 - G 76 -13.4 -3.14132 | GCTGTGGCCGACGAA GCGGCTGGCCTGGCGC ACG ACCCCGGGCCAGTCGC TGCGGATGACCAGAT Pput_3984 4494247 - 4493312 - | lipid A biosynthesis lauroyl acyltransferase TERM 3467 4494757 - 4494745 - g 74 -4.7 -4.67353 | CGAGGTAGTCAAAAA GCCCG AAC CGGCC CCTGCCCCGGCGCCA minC 4494359 - 4495126 + | septum formation inhibitor Pput_3986 4495236 - 4496048 + | septum site-determining protein MinD minE 4496052 - 4496306 + | cell division topological specificity factor MinE TERM 3468 4496403 - 4496430 + F 73 -9 -3.88442 | gap 1, opp_overlap 4496419 AGGAGCGGGCTTGCC CGCGAAGGGCCGC AAA GCGGCCCCA-GCG TTTACTGCTATTTTC TERM 3469 4496756 - 4496719 - g 72 -2.6 -4.81249 | gap 2, overlap 4496720 CGTGAAACCGAAAAA GCCTACACCGCGCTGTGC TGGG GC-CAGC-CGGCGCTGGA CAGCGGCAGCATCGA Pput_3988 4496458 - 4497093 + | pseudouridine synthase Pput_3989 4497262 - 4498551 + | putative aminopeptidase 2 TERM 3470 4498605 - 4498557 - f 100 -33.3 -3.05463 | opp_overlap 4498560 ACTGCCCTGATGTAA GCAGGCCCGGCCTATTCGCGGCG GTT CGACGCGAACAGGCCGAGCCTGC TTACACATGCTCAAG TERM 3471 4498560 - 4498602 + F 100 -23.4 -2.72661 | opp_overlap 4498557 GCCCTGATGTAAGCA GGCCCGGCCTATTCGCGGCG GTT CGACGCGAACAGGCCGAGCC TGCTTACACATGCTC Pput_3990 4498689 - 4498856 + | hypothetical protein TERM 3472 4499093 - 4499065 - g 81 -10.3 -4.16921 | CAAGAACCTCGAAAA CGACCAGCAAC GGGCCAA GCTGCTGGCCG ACCTGAAAAAACTGC TERM 3473 4500452 - 4500489 + G 86 -12.7 -4.07885 | gap 1, overlap 4500456 ATGAACGTCACCCCG CTGCTGGCCGGCGCCGGT GTG ATCGGC-CTGGCCATCGG TTTTGGCGCGCAGTC Pput_3991 4498901 - 4501048 + | MscS mechanosensitive ion channel TERM 3474 4501038 - 4501055 + T 79 -12.7 -3.53012 | opp_overlap 4501036 GTGGGATGACAGAGG CCCGCTC GTAG GAGCGGG TTTACCCGCCAAGAA Pput_3992 4501793 - 4501080 - | GntR family transcriptional regulator Pput_3993 4502121 - 4503185 + | ABC-type Fe3+ transport system periplasmic component-like protein TERM 3475 4503271 - 4503231 - f 70 -9.9 -3.53012 | gap 2, opp_overlap 4503231 CCTTTCGCGGGTAAA CCCGCTCCTACACAGGGAT ACGCG ATACCTG--TAGGAGCGGG TTTACCCGCGAAGGT TERM 3476 4503231 - 4503271 + F 70 -9.9 -3.53091 | gap 2, opp_overlap 4503231 CCTTTCGCGGGTAAA CCCGCTCCTACACAGGGAT ACGCG ATACCTG--TAGGAGCGGG TTTACCCGCGAAGGT Pput_3994 4503300 - 4504121 + | type I phosphodiesterase/nucleotide pyrophosphatase Pput_3995 4504130 - 4504957 + | binding-protein-dependent transport systems inner membrane component Pput_3996 4504947 - 4505741 + | binding-protein-dependent transport systems inner membrane component TERM 3477 4506093 - 4506142 + G 81 -13.4 -3.60098 | GCGGGTACGCGAGGT GCTGGAGCTGGTGGAGCTGGGC AAGTTC GCCGGGCGCTACCCGCACCAGC TTTCCGGTGGCCAGT Pput_3997 4505743 - 4506732 + | ABC transporter related Pput_3998 4506747 - 4507400 + | HAD family hydrolase Pput_3999 4508482 - 4507520 - | quinone oxidoreductase putative, PIG3 TERM 3478 4508510 - 4508534 + H 100 -15.8 -4.21827 | opp_overlap 4508504 GTTGAATCATGACTG GGCCTGAGGT CGCTT ACCTCAGGCC TTTTGCAGTATTTGC TERM 3479 4509860 - 4509840 - g 81 -7.5 -4.40003 | CTGCAGAAAGAGAAA GTCGACGGC GTG GTCATCGAC CTGCGCAACAACGGC TERM 3480 4510014 - 4509986 - g 76 -6.5 -4.4261 | overlap 4510004 4510005 GCTGGAAGACGAAAA CCCGGGGGCCTTC TAC AAGGGCCCGCTGG CACTGCTGGTCAACC Pput_4000 4508589 - 4510703 + | carboxyl-terminal protease TERM 3481 4510805 - 4510770 - f 90 -16.2 -3.53012 | opp_overlap 4510772, overlap 4510772 4510775 CGTGCTGTCGTGAAA TATGAGGGCCGGGCAT GCAG ATGCCCGGCCCTTATT TTTCAGGAATCCATC TERM 3482 4510772 - 4510803 + F 100 -21 -4.58395 | opp_overlap 4510770 4510772 4510775 TGCTGTCGTGAAATA TGAGGGCCGGGCAT GCAG ATGCCCGGCCCTTA TTTTTCAGGAATCCA TERM 3483 4510803 - 4510772 - f 95 -18.8 -3.34398 | opp_overlap 4510772, overlap 4510770 4510775 TGCTGTCGTGAAATA TGAGGGCCGGGCAT GCAG ATGCCCGGCCCTTA TTTTTCAGGAATCCA TERM 3484 4510800 - 4510775 - f 100 -20.5 -2.84325 | opp_overlap 4510772, overlap 4510772 4510770 TGTCGTGAAATATGA GGGCCGGGCAT GCAG ATGCCCGGCCC TTATTTTTCAGGAAT TERM 3485 4511292 - 4511316 + G 75 -15 -2.78816 | GCCATCGACGACCTG GGCGCGGGCT ATTCC AGCCTGCGCC TGTGGTCGGAGCTGC Pput_4001 4510821 - 4511894 + | diguanylate phosphodiesterase Pput_4002 4512450 - 4512082 - | hypothetical protein Pput_4003 4512785 - 4512447 - | XRE family transcriptional regulator TERM 3486 4512822 - 4512804 - R 93 -10.4 -4.58685 | overlap 4512793 4512792 AAACCCCTTTAAAAA GGATTACA GCA TGTAATCC GTAGGCATAACCCTT Pput_4004 4513337 - 4512900 - | hypothetical protein TERM 3487 4513357 - 4513383 + r 81 -13.9 -3.28712 | opp_overlap 4513357 4513382 CCTCCGAGAGGAAAA GGTTATCCACA TTTAT TGTGGATAACC TTGTGAACAGGGCGA TERM 3488 4513383 - 4513357 - R 95 -13.9 -4.34402 | opp_overlap 4513357, overlap 4513382 CCTCCGAGAGGAAAA GGTTATCCACA TTTAT TGTGGATAACC TTGTGAACAGGGCGA TERM 3489 4513431 - 4513449 + r 86 -6.6 -5.02074 | overlap 4513432 GCCTGCCAGGCAAGG GGCCCGGT CAG ATCGGGCG TTTTTTACACAGTCG TERM 3490 4513432 - 4513448 + r 72 -10.1 -3.60762 | overlap 4513431 CCTGCCAGGCAAGGG GCCCGGT CAG ATCGGGC GTTTTTTACACAGTC TERM 3491 4513611 - 4513580 - R 100 -16.7 -3.89614 | opp_overlap 4513586, overlap 4513586 TCCAATCGGCACAAA CGAAAACGCCCCA ACAATG TGGGGCGTTTCCG ACAACCAGCCAATGT TERM 3492 4513586 - 4513605 + r 72 -10.7 -3.53012 | opp_overlap 4513580 4513586 CGGCACAAACGAAAA CGCCCCA ACAATG TGGGGCG TTTCCGACAACCAGC TERM 3493 4513605 - 4513586 - R 93 -10.7 -4.61873 | opp_overlap 4513586, overlap 4513580 CGGCACAAACGAAAA CGCCCCA ACAATG TGGGGCG TTTCCGACAACCAGC Pput_4005 4514378 - 4513626 - | peptidylprolyl isomerase, FKBP-type TERM 3494 4514004 - 4514027 + g 72 -7.4 -4.24711 | gap 1, opp_overlap 4514021, overlap 4514007 4514021 TTCGTACTGCAGGCC CGAGGCAGTGG TAA CCAC-GCCTGG TTTCTTGGCGTTTTC TERM 3495 4514021 - 4514037 + g 76 -5.7 -4.63486 | opp_overlap 4514021, overlap 4514007 4514004 AGGCAGTGGTAACCA CGCCTGG TTT CTTGGCG TTTTCTTCGAGGAAT TERM 3496 4514549 - 4514564 + r 75 -6 -4.56887 | overlap 4514550 GTATTGACCCTTTGT GCCGGG TTTG CCGGGC TTTTGTGGCTTTTTA Pput_4006 4515597 - 4514665 - | LysR family transcriptional regulator TERM 3497 4516099 - 4516074 - g 72 -4 -4.63218 | gap 1 CGTCTTTCAACAAAA CAGGTCTTGTC TATCT GACT-GACCTG AGCACAGTTTTTGAT Pput_4007 4515794 - 4517074 + | hypothetical protein Pput_4008 4517272 - 4517556 + | hypothetical protein Pput_4009 4518615 - 4517686 - | helix-turn-helix domain-containing protein TERM 3498 4518018 - 4518055 + g 82 -14.8 -3.25942 | overlap 4518019 GCAGGTAGTCGCTCA TGCGGCCCAGCGCAGC ACGGCG GCTGAGCTGGGCAGCG TTGCTGTCGGCCAGT TERM 3499 4518019 - 4518054 + g 80 -16.1 -2.55351 | overlap 4518018 CAGGTAGTCGCTCAT GCGGCCCAGCGCAGC ACGGCG GCTGAGCTGGGCAGC GTTGCTGTCGGCCAG TERM 3500 4518922 - 4518899 - H 76 -6.6 -4.58786 | ACCAACAACAACAAA CGAGGTCGAC TCAT GTCGAGCACG CCTACCCCCCGCGCC Pput_4010 4518911 - 4520251 + | major facilitator transporter TERM 3501 4520504 - 4520552 + G 72 -11.7 -3.35679 | gap 2, overlap 4520507 CCCGCCGGCCATCGT CAGCCTGCCGATCCGCGGCAGCG ATGCG CGCTTCC-CGG-TCGGCCGGGTG TTCTGCCTCGGCCGC TERM 3502 4520580 - 4520615 + G 80 -6 -4.72272 | gap 1, opp_overlap 4520573, overlap 4520581 CGCAACTACCCGTGG C-CGGAATCCTACGGCG CGG CGCCGCAGGAGCCTGTG TTTTTCATGAAACCG TERM 3503 4520581 - 4520613 + G 76 -9.7 -3.98256 | opp_overlap 4520573, overlap 4520580 GCAACTACCCGTGGC CGGAATCCTACGGCG CGG CGCCGCAGGAGCCTG TGTTTTTCATGAAAC Pput_4011 4520472 - 4521182 + | fumarylacetoacetate (FAA) hydrolase Pput_4012 4521201 - 4521959 + | short-chain dehydrogenase/reductase SDR TERM 3504 4522263 - 4522300 + G 71 -12.8 -3.05963 | gap 2 CGCGGCATCCAGGTG ACGGCGAC--CCTCGGTG CGCT CACCGAGGACGTCGCCGA TCTTGCCATCGGCCT Pput_4013 4521984 - 4522934 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_4014 4523424 - 4523062 - | nitrite reductase (NAD(P)H), small subunit TERM 3505 4523368 - 4523386 + g 80 -6 -4.71776 | CACCAGGTCTTGTGC CTGGCA CACCGGC TGCCAG TTTTCTTGCGTGTTC Pput_4015 4525976 - 4523424 - | nitrite reductase (NAD(P)H), large subunit TERM 3506 4524255 - 4524276 + g 90 -8.7 -4.91459 | ACCACCGGGAATGCG CGGCACC ACCGAATA GGTGCCG TTTTTCTGCATGTTG TERM 3507 4526001 - 4526028 + r 100 -17 -3.77177 | opp_overlap 4526002, overlap 4526002 4526019 4526021 CTCGATCAAAAAAAA AGCGCCTGGAGC CGAA GCTCCAGGCGCC TTTGCCTGTATTCAT TERM 3508 4526002 - 4526027 + r 100 -20.5 -2.85583 | opp_overlap 4526002, overlap 4526001 4526019 4526021 TCGATCAAAAAAAAA GCGCCTGGAGC CGAA GCTCCAGGCGC CTTTGCCTGTATTCA TERM 3509 4526027 - 4526002 - R 100 -20.5 -6.15828 | opp_overlap 4526002 4526001 4526019 4526021 TCGATCAAAAAAAAA GCGCCTGGAGC CGAA GCTCCAGGCGC CTTTGCCTGTATTCA Pput_4016 4530281 - 4526256 - | molybdopterin oxidoreductase TERM 3510 4527925 - 4527907 - G 78 -6.6 -4.55295 | overlap 4527892 4527910 CCGTCGACAAACAAA CGACGGCT GGC AGCCAGCG GCGCACTGGGCGGCA TERM 3511 4528300 - 4528254 - G 73 -10.8 -3.65902 | gap 1, overlap 4528266 GTCATTCCAGTGAAA CGGCGCAAAGCAGTTGCCCGG CATGAC CCGGTC-ACTGATGCGCGCCG GCAACACGGCGTGCC TERM 3512 4530310 - 4530357 + H 100 -19.9 -3.9712 | opp_overlap 4530310 TGGAAAACGCAAAAA GGCGCCG-GCTGCCCCGGCATGC TGAT GCAAGC-GGGGCAACACGGCGCC TTTGTCGTGAAGTGA TERM 3513 4530357 - 4530310 - H 100 -22.1 -4.87318 | opp_overlap 4530310 TGGAAAACGCAAAAA GGCGCCG-GCTGCCCCGGCATGC TGAT GCAAGC-GGGGCAACACGGCGCC TTTGTCGTGAAGTGA Pput_4017 4530600 - 4531397 + | methionine aminopeptidase, type I TERM 3514 4531476 - 4531437 - f 74 -13 -2.80077 | opp_overlap 4531441 4531449, overlap 4531449 GGGGGACAAAATTCA GGCACAAAAAAAGCGACC CTAG GGTCGCTTTCTTTGTTAC TTCCGGGTGTTCAGT TERM 3515 4531441 - 4531472 + F 83 -14.6 -3.35639 | opp_overlap 4531437 4531449, overlap 4531449 GACAAAATTCAGGCA CAAAAAAAGCGACC CTAG GGTCGCTTTCTTTG TTACTTCCGGGTGTT TERM 3516 4531449 - 4531464 + F 95 -10.4 -4.73297 | opp_overlap 4531437 4531449, overlap 4531441 TCAGGCACAAAAAAA GCGACC CTAG GGTCGC TTTCTTTGTTACTTC TERM 3517 4531464 - 4531449 - f 100 -10.4 -5.64274 | opp_overlap 4531449 4531441, overlap 4531437 TCAGGCACAAAAAAA GCGACC CTAG GGTCGC TTTCTTTGTTACTTC TERM 3518 4531785 - 4531800 + F 95 -10.4 -4.73297 | opp_overlap 4531774 4531785 TCAGGCAAAAAAAAA GCGACC CTAA GGTCGC TTTCTTTGTTACTTC TERM 3519 4531800 - 4531785 - f 100 -10.4 -6.11644 | opp_overlap 4531785, overlap 4531774 TCAGGCAAAAAAAAA GCGACC CTAA GGTCGC TTTCTTTGTTACTTC TERM 3520 4532029 - 4532065 + F 70 -2.7 -4.77925 | overlap 4532023 4532031 TCGTCTCGGTGTGGC GCGCATTCTACGGAGCG TCC CGCACCCTGGCAAGCAC TTTTTAAACTTTTTT rdgC 4532193 - 4533149 + | recombination associated protein Pput_4019 4533544 - 4533861 + | small multidrug resistance protein Pput_4020 4535743 - 4533866 - | phospholipid/glycerol acyltransferase TERM 3521 4535707 - 4535693 - G 78 -4.9 -4.7497 | CTGAGTGATGAAAAA CGGCA GGAAA CGCCG CTTGCCGAGCAAGGT Pput_4021 4536743 - 4535901 - | amidohydrolase 2 Pput_4022 4538033 - 4536759 - | major facilitator transporter TERM 3522 4537043 - 4537020 - G 72 -4.4 -4.66609 | overlap 4537021 CAGCTCATTGAAAAA CGCACCCAGG CTGG CCGGGATGCC GGCGGCGAAAAAGCC TERM 3523 4538101 - 4538078 - R 75 -13.9 -2.53876 | GGGCAGGCGAAGCCA CTGCGCCGT GGCAGT ACGGCGCAG ACAGGTAAAAGGGTG Pput_4023 4538859 - 4538128 - | GntR family transcriptional regulator TERM 3524 4538791 - 4538814 + g 88 -14.6 -3.71848 | overlap 4538792 GCGGTTGTTGGCAAT TTGCGCGACC ATGT GGTCGCGCAG TTGTTGGTAGCGGGG TERM 3525 4538792 - 4538813 + g 79 -15.9 -2.82895 | overlap 4538791 CGGTTGTTGGCAATT TGCGCGACC ATGT GGTCGCGCA GTTGTTGGTAGCGGG TERM 3526 4539383 - 4539393 + G 79 -8.2 -4.29348 | overlap 4539380 CGGTCGCCAGCCGTT CGGC ACT GCCG TTCTTCTTTTGTCTG Pput_4024 4539055 - 4540269 + | major facilitator transporter Pput_4025 4540396 - 4543875 + | integral membrane sensor hybrid histidine kinase Pput_4026 4545334 - 4543847 - | hypothetical protein TERM 3527 4544608 - 4544622 + g 76 -7.1 -4.41241 | overlap 4544620 CGAGGATAAGCTCAC CCCAG TTACC CTGGG TTTTCTGGCCCTTTA TERM 3528 4545815 - 4545777 - R 71 -4.4 -4.61199 | overlap 4545780 4545781 AGCTCAGACAGAAAA CCACTGTCGCAACAAGCG CCG CGCTTCCTGCGACCCCTG CCCTGCCGCAAGCTC Pput_4027 4546184 - 4545765 - | Sel1 domain-containing protein TERM 3529 4546411 - 4546395 - H 70 -10.9 -3.29043 | AAGCGCTCGGGACAA TCCACAG TTC CTGTGGA TAACTCGGTGGACAA TERM 3530 4546468 - 4546482 + H 77 -2.8 -5.0133 | opp_overlap 4546476, overlap 4546470 GTGAATTGGGGGCTT TGGTCA AAC TGACGA TTTTTTCACCAGCTA Pput_4028 4547136 - 4547360 + | hypothetical protein Pput_4029 4547610 - 4548092 + | hypothetical protein Pput_4030 4548239 - 4549519 + | membrane protein involved in aromatic hydrocarbon degradation TERM 3531 4549541 - 4549555 + T 90 -8.5 -5.1675 | opp_overlap 4549541 TGCGCTACATGAAAA CCGCC CTCGT GGCGG TTTTTTCATGCCTGC TERM 3532 4549555 - 4549541 - T 77 -8.5 -4.34402 | opp_overlap 4549541 TGCGCTACATGAAAA CCGCC CTCGT GGCGG TTTTTTCATGCCTGC Pput_4031 4550490 - 4549561 - | LysR family transcriptional regulator Pput_4032 4550605 - 4550865 + | hypothetical protein Pput_4033 4551561 - 4551010 - | glutathione peroxidase Pput_4034 4551730 - 4551608 - | hypothetical protein Pput_4035 4552929 - 4551727 - | major facilitator transporter TERM 3533 4552961 - 4552976 + r 72 -10.4 -3.49924 | opp_overlap 4552949 ACATCGCAAGGTTTT GCGGGT ATAT ACCCGC TTATAGTCGTTTCAC Pput_4036 4553397 - 4552993 - | MarR family transcriptional regulator Pput_4037 4554641 - 4553460 - | glycoside hydrolase family protein cobS 4555523 - 4554801 - | cobalamin synthase Pput_4039 4556091 - 4555525 - | phosphoglycerate mutase cobT 4557143 - 4556088 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 3534 4556680 - 4556706 + g 79 -9.5 -4.21194 | gap 1, overlap 4556673 4556671 TGGGCACTGTCGCGA CCGGCCTGCAAG GCCG CTTGCAG-CTGG TTTTCGGTCATCGCG cobU 4557661 - 4557140 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Pput_4042 4559117 - 4557663 - | cobyric acid synthase Pput_4043 4560106 - 4559114 - | threonine-phosphate decarboxylase cobD 4561007 - 4560099 - | cobalamin biosynthesis protein TERM 3535 4560986 - 4560964 - G 71 -9 -3.72576 | overlap 4560933 GGTTCGCCCAGCAAA GCGTCCAGGG CCA CCCCGGCCAC GGTCAGCAAGGCCAC Pput_4045 4561654 - 4561004 - | cob(II)yrinic acid a,c-diamide reductase Pput_4046 4562946 - 4561651 - | cobyrinic acid a,c-diamide synthase Pput_4047 4563554 - 4562943 - | cob(I)yrinic acid a,c-diamide adenosyltransferase Pput_4048 4564550 - 4564017 - | NLP/P60 protein TERM 3536 4564537 - 4564527 - G 77 -2.4 -4.98255 | TGCCAAGGAGAAAAA TGCG AAG CGCG CCATCTTTACCATGG TERM 3537 4564671 - 4564628 - R 90 -15.5 -3.53224 | opp_overlap 4564631, overlap 4564615 GACGCTTTCTGTAAA TGCGCACGGCGGCGA-GCTTT TTTT AAAGCATCACCGCCGCG-GCA GGGTACATCATTTTG TERM 3538 4564631 - 4564644 + r 86 -3.7 -5.41143 | opp_overlap 4564628 GCTTTCTGTAAATGC GCACG GCGG CGAGC TTTTTTTAAAGCATC Pput_4049 4565328 - 4564690 - | NLP/P60 protein Pput_4050 4566163 - 4565456 - | DNA replication initiation factor Pput_4051 4567467 - 4566403 - | hypothetical protein TERM 3539 4567524 - 4567502 - R 90 -12 -4.21194 | opp_overlap 4567507 CCTTACCAGCGAAAA CGCAAGCCGT CGA ACGGCTTGGG TGCTGGCTGCGCAGG Pput_4052 4568556 - 4567489 - | hypothetical protein TERM 3540 4567572 - 4567614 + g 70 -11.8 -3.16742 | TGGCGTCCACTGCCG GTGCTGGCATGGCCGGCACC GCC GGTGCCTGCTCGACCGGCAC TTCCTGCAGCTTGGC TERM 3541 4568632 - 4568612 - H 84 -5.3 -5.08088 | opp_overlap 4568612 4568618 AAGCTGCAAGAAAAA GCAGGCCGA GCG CCAGGCTGC ATTGTCGTGCAGCCG TERM 3542 4568820 - 4568840 + H 73 -5.3 -4.60041 | overlap 4568816 CCGCCGCTTATCAGC CGGCCTTGG CCG TCATGGTCG TTTTTAAGAATCCCT TERM 3543 4569074 - 4569044 - g 82 -14.6 -3.28712 | opp_overlap 4569032 CCCGGCCGGCTACAA GCAGCCGGTGCTGG TCT CCGGCACCGACGGC GTCGGCACCAAGCTG Pput_4053 4568877 - 4569935 + | phosphoribosylaminoimidazole synthetase TERM 3544 4570145 - 4570180 + G 85 -15.5 -3.53224 | gap 1 TTCGACGGCCGTGAA GCCTTCGATGC-CGCC CTGAT GGCGCGCATCGACGGC TTTGCCCCGGACCTG purN 4569935 - 4570588 + | phosphoribosylglycinamide formyltransferase Pput_4055 4570597 - 4571307 + | hypothetical protein TERM 3545 4571333 - 4571351 + F 100 -13.1 -4.93877 | CCTGCAACACCTGAA GCCCCGC CCTGT GCGGGGC TTTTCTTTGCTGCGA TERM 3546 4571483 - 4571460 - f 73 -8.2 -4.09551 | gap 1, opp_overlap 4571459, overlap 4571448 AAACTCTATAAAGAA GACGTGCGACA CAC TGTCGCA-GCC ATCTTGAAGAAGTGG Pput_4056 4571508 - 4571690 + | hypothetical protein TERM 3547 4571775 - 4571739 - T 90 -18.1 -3.18264 | overlap 4571747 4571749 GGGCTGAGTGAGCAA CCCCACAATACTGCGGC ATT ACCGGAGCATTGTGGGG TTGCCATGTCAGGGC Pput_4057 4574049 - 4571791 - | glucose-methanol-choline oxidoreductase TERM 3548 4572051 - 4571998 - G 71 -13.1 -3.09516 | gap 1, overlap 4572048 CGGTTGACCAGGCAA GGCATAGCCGGGCTTGGCGATCAACC TTG GGTTGCCCGCCGCGCC-AACCATGCC GGTGGCCGGGTTCGC Pput_4058 4574537 - 4574046 - | hypothetical protein Pput_4059 4575882 - 4574542 - | hypothetical protein TERM 3549 4575563 - 4575602 + g 71 -5.1 -4.42464 | gap 3, overlap 4575540 4575564 4575570 GCCTGCTGGTCCCAG GCGACG-GG-CTT-CTGCCC CTT GGGCAGGAAGATCTCGTAGC TTTCTTTCCACGATT TERM 3550 4576173 - 4576157 - R 90 -15.1 -3.64703 | CCGTGTGCAGCGAAA GGGCCGC AGA GCGGCCC TGCAATCTTGAATGA Pput_4060 4576760 - 4576221 - | hypothetical protein TERM 3551 4576530 - 4576551 + g 71 -5.8 -4.32034 | gap 1, overlap 4576526 4576521 TTGCTTGACCTGCGC GGCACGGGC CTTCT GCTCG-GCC TTTTCCTGCTGCTGG mazG 4577620 - 4576787 - | nucleoside triphosphate pyrophosphohydrolase TERM 3552 4577123 - 4577134 + g 80 -5.8 -4.70879 | opp_overlap 4577119 4577122 CCAGTCGAAACCGAC CGTG GCCG CACG TTTTTGCAGTTTGGC Pput_4062 4579985 - 4577745 - | (p)ppGpp synthetase I, SpoT/RelA TERM 3553 4578702 - 4578678 - G 70 -9.9 -3.6502 | opp_overlap 4578685 CACGCGGTAGGCAAA GTCCAATGGCG TGG CGCCTTTGGGC AGGTCGATGGCGTGG rumA 4581440 - 4580082 - | 23S rRNA 5-methyluridine methyltransferase TERM 3554 4580346 - 4580313 - G 91 -9.6 -4.40804 | gap 2, overlap 4580303 4580300 GAGTACCGCAGAAAA GCCCTCGGC-GGC-CC ATCC GGTGCCTGCCAAAGGC TGCGATAAATCGGCC TERM 3555 4580641 - 4580596 - G 88 -14.5 -3.73775 | TTCACCTGCACGAAA TCGCCCGGGCGCCAGGCCAGC TCCA GCTGCCAAGGTGCCAGGGCGA AGCCCAACTGCGCCG cysM 4582379 - 4581441 - | cysteine synthase B TERM 3556 4582475 - 4582512 + r 85 -14.2 -3.53012 | opp_overlap 4582475 CTCTTCGCGGGTAAA CCCGCTCCTACAGG GATTCGCTAG CCTGCAGGAGCGGG TTTACCCGCGAAGCG TERM 3557 4582512 - 4582475 - R 93 -16.4 -3.53012 | opp_overlap 4582475 CTCTTCGCGGGTAAA CCCGCTCCTACAGG GATTCGCTAG CCTGCAGGAGCGGG TTTACCCGCGAAGCG Pput_4065 4583873 - 4582482 - | integral membrane sensor signal transduction histidine kinase Pput_4066 4584638 - 4583877 - | two component transcriptional regulator TERM 3558 4584475 - 4584442 - G 74 -5.9 -4.47259 | gap 1, opp_overlap 4584442 4584445, overlap 4584444 AGCACAACATCAAAA GCCTGG-CGGCCAG CCGTTTC CAGGCCCTCCAGGC CATTGCGGCACCAGG TERM 3559 4585746 - 4585730 - g 81 -4.3 -5.00884 | overlap 4585731 ACCTGCTGCAAAAAA GCGAGAT GAC ACCGCGC CAGCTCGACTACCTG TERM 3560 4586188 - 4586230 + G 74 -12.1 -3.53444 | gap 2, opp_overlap 4586188 4586187 4586191 AGCCAGGCTGACAAC TCACTGGCTCGCCAGCCCGGT GGC ACCGGTCTGG-G-GCTGGTGA TTTCCAAGCGCCTGA TERM 3561 4586430 - 4586404 - g 80 -14.4 -3.15544 | GTCGATGGCCACGAA CTGGCGCGCCAG GCA CTGGAGCACCAG CTGGAAGACTGCGGC Pput_4067 4584790 - 4587543 + | multi-sensor hybrid histidine kinase Pput_4068 4587620 - 4588609 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_4069 4588641 - 4589078 + | hypothetical protein TERM 3562 4589389 - 4589366 - g 90 -8.8 -4.88228 | overlap 4589359 4589357 ATGGAACAGGAAAAA CGCTTCCTGC AGGC GCTGGAAACG GTAGAGCGTTGGGAT Pput_4070 4589075 - 4589479 + | protein of unknown function DUF306, Meta and HslJ TERM 3563 4589586 - 4589569 - T 85 -14.1 -3.53012 | opp_overlap 4589554 4589554, overlap 4589580 GGGCCTGCCCGCAAA GGGCCGC AAAA GCGGCCC GAATGCATCAGGCGC Pput_4071 4590058 - 4589594 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Pput_4072 4590144 - 4590497 + | arsenate reductase Pput_4073 4590494 - 4591099 + | flavodoxin/nitric oxide synthase Pput_4074 4591092 - 4591505 + | hypothetical protein Pput_4075 4592280 - 4591609 - | 3-methyladenine DNA glycosylase-like protein Pput_4076 4593109 - 4592285 - | PP-loop domain-containing protein TERM 3564 4593049 - 4593070 + g 88 -8.6 -4.7339 | AGTCGGTGATGGCTT CGCCAGCG AGACGA CGCAGGCG TTTTTGCAGTTTGTT Pput_4077 4593373 - 4593972 + | hypothetical protein TERM 3565 4594039 - 4593990 - f 74 -11.4 -3.26366 | gap 2, overlap 4593988 4594002 CAGACCTAACCAACA CTGGGGCATCAACCAGGGGCCGCC GCAA GGCGGCCTCTGGCTG-TG-CGCTG ACCGGTGACTCGGCA TERM 3566 4594029 - 4594002 - f 90 -18.4 -3.14683 | overlap 4593990 4593988 ACACTGGGGCATCAA CCAGGGGCCGCC GCAA GGCGGCCTCTGG CTGTGCGCTGACCGG TERM 3567 4594233 - 4594215 - g 72 -3.7 -4.56597 | overlap 4594167 4594200 CTGCGCGGGCAAAAA GCCGGCG TCGCC CACCTGC ACGAGAATCTGCTGC Pput_4078 4594104 - 4594598 + | hypothetical protein TERM 3568 4594636 - 4594693 + T 100 -21.3 -3.53012 | overlap 4594636 CCTTTCGCGGGCAAG CCCGCTCCTACGGGTTTCGTGCAATTC CCGG GACGTGCGCTGCACCCGTAGGAGCGGG TTTACCCGCGAAAGG TERM 3569 4594764 - 4594747 - T 73 -9.1 -3.97947 | opp_overlap 4594747 CCCAGGCATGAGAAA GGCGACC CGAG AGTCGCC TTCCTGTACCCGCCT Pput_4079 4595564 - 4594785 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 3570 4595605 - 4595587 - H 86 -5.9 -5.06414 | overlap 4595588 4595589 4595599 GCTCCTGAAGAAAAA CGCGCGC GCAAA GCGCACA GTTGCGCAATAGTTT Pput_4080 4595682 - 4596608 + | LysR family transcriptional regulator Pput_4081 4596970 - 4596605 - | diacylglycerol kinase TERM 3571 4597039 - 4597026 - R 72 -2.3 -5.00616 | GCTCGGGTCAAAAAA GCGTG AAGC CATGC GCAGTCAGTTGCTGG Pput_4082 4597694 - 4597044 - | two component LuxR family transcriptional regulator Pput_4083 4598583 - 4597873 - | DTW domain-containing protein Pput_4084 4598800 - 4599219 + | hypothetical protein TERM 3572 4599243 - 4599216 - T 73 -8.4 -4.09963 | opp_overlap 4599220 CGGCAACAAGAAGAA GTAAGCACAGCG TCAA CGCTACGCTTTC TCGTCCTCATGAGCG Pput_4085 4599443 - 4599234 - | hypothetical protein Pput_4086 4599604 - 4600722 + | hypothetical protein recX 4601459 - 4600989 - | recombination regulator RecX recA 4602548 - 4601481 - | recombinase A Pput_4089 4603134 - 4602652 - | CinA domain-containing protein Pput_4090 4604258 - 4603191 - | hypothetical protein TERM 3573 4605161 - 4605211 + G 77 -12.8 -3.54662 | gap 2, opp_overlap 4605157, overlap 4605162 CCCACAAAGATCGCT ATCTACG-CCAG-CTCCTCCTGAA GGATA TTCAGGAGGAGACTGGGCGTAGCC TTATCGTCTATTTCA TERM 3574 4605162 - 4605210 + G 81 -16.3 -2.72074 | gap 2, opp_overlap 4605157, overlap 4605161 CCACAAAGATCGCTA TCTACG-CCAG-CTCCTCCTGAA GGATA TTCAGGAGGAGACTGGGCGTAGC CTTATCGTCTATTTC Pput_4091 4605034 - 4605915 + | hypothetical protein TERM 3575 4605923 - 4605936 + T 100 -9.5 -5.252 | opp_overlap 4605923 4605922 4605921 CCCCTTAACAAAACT GGGCC GAGA GGCCC TTTTTTGTGCCCGTA Pput_4092 4606257 - 4605952 - | hypothetical protein Pput_4093 4606547 - 4606254 - | hypothetical protein Pput_4094 4606845 - 4606621 - | hypothetical protein Pput_4095 4607353 - 4606859 - | hypothetical protein Pput_4096 4607799 - 4607350 - | hypothetical protein TERM 3576 4607837 - 4607821 - R 93 -10.8 -4.53602 | TCCAGACGAAAGAAA GCCCGC GCATG GCGGGC TGCATGAATCTCGGG TERM 3577 4607875 - 4607863 - R 93 -6.2 -5.60993 | TCGGGCACAAAAAAA CCGC TCAAG GCGG CCGTTCGGTGTCAGG Pput_4097 4608702 - 4607896 - | hypothetical protein Pput_4098 4610664 - 4608727 - | hypothetical protein TERM 3578 4610700 - 4610687 - R 100 -8.1 -5.78622 | CCAGGCGAAAAAAAA CCCAC CGAA GTGGG CAGGGAATTAGGTAG Pput_4099 4611190 - 4610708 - | hypothetical protein Pput_4100 4614300 - 4611202 - | hypothetical protein TERM 3579 4613218 - 4613197 - GR 74 -10.9 -3.60296 | gap 1 CAGCGTCACGGGAAA CGTG-CTCGC GCC GCGAGTCACG GTGAAGCTCAGCGGC Pput_4101 4614691 - 4614272 - | hypothetical protein Pput_4102 4615557 - 4615075 - | hypothetical protein Pput_4103 4617998 - 4615554 - | hypothetical protein TERM 3580 4617484 - 4617503 + g 76 -5.8 -4.65153 | gap 1, opp_overlap 4617483 4617484 GCTTCGAGGTAGAAG GTCATGTCA GAC TGAC-TGAC TTTTGCTTTCTCTAG TERM 3581 4617855 - 4617870 + g 71 -9 -3.68261 | opp_overlap 4617854 GATTCCAGAACCTAT GGCAGT ACCA ACTGCC TTTGCACTATTCTCA TERM 3582 4618035 - 4618021 - R 100 -12.8 -5.75342 | opp_overlap 4618019 4618018 TCCGGGCAAAAAAAA GCCCGC AGA GCGGGC GCATTGTCAATTGTG Pput_4104 4618404 - 4618054 - | hypothetical protein Pput_4105 4618678 - 4618478 - | hypothetical protein Pput_4106 4619172 - 4618702 - | hypothetical protein Pput_4107 4619915 - 4619181 - | hypothetical protein TERM 3583 4619959 - 4619945 - R 90 -8.5 -5.07652 | opp_overlap 4619944 GCGGGCAAAAGAAAA CCCGC ACTGG GCGGG CTATTGGGGTTTGTT Pput_4108 4620349 - 4619981 - | hypothetical protein Pput_4109 4620831 - 4620346 - | HK97 family phage protein Pput_4110 4621168 - 4620824 - | phage head-tail adaptor, putative Pput_4111 4621488 - 4621165 - | hypothetical protein Pput_4112 4622429 - 4621485 - | hypothetical protein Pput_4113 4623783 - 4622416 - | HK97 family phage portal protein Pput_4114 4624022 - 4623798 - | hypothetical protein TERM 3584 4623841 - 4623854 + g 76 -9.5 -4.0492 | TAAGTGCGCTTTGCT GGGCC GCCT GGCCC TTTCTGTCGGCCTTC TERM 3585 4624062 - 4624042 - R 74 -12.5 -2.87211 | overlap 4624056 ATTTCCTCGCAGAGA TGGCCGGGT TAA ACCCGGCCG CGGCGGTTCAGGATT Pput_4115 4626019 - 4624070 - | peptidase U35, phage prohead HK97 TERM 3586 4626054 - 4626042 - R 72 -6.2 -4.39571 | opp_overlap 4626042, overlap 4626043 CCCAGAAATGCAAAA GCCC GCACT GGGC GGGTCTGGCTTAGCC Pput_4116 4627743 - 4626076 - | phage terminase TERM 3587 4626298 - 4626282 - G 75 -4.4 -4.72986 | GATCGGCATGAAAAA GCTTAC GCTCT GCAAGC CTTCGCTCTGCGATG Pput_4117 4628243 - 4627746 - | hypothetical protein TERM 3588 4628206 - 4628223 + g 75 -4.1 -4.74706 | overlap 4628198 GCACCTCCCCTGATA GCGTC AATAAACC GACGC TTTTTGGGTGTTAAA TERM 3589 4628357 - 4628341 - R 71 -7.2 -4.18197 | overlap 4628355 ACCCCCCACCCAAAA CGCCCC AAAAA AGGGCG GAAACCGGGGGTGTA Pput_4118 4628694 - 4628389 - | HNH endonuclease TERM 3590 4628506 - 4628517 + g 71 -5.8 -4.36914 | GTTGATGATGTGGTC GACC TCAA GGTC TTTTGTGACCAGGCC Pput_4119 4628933 - 4628694 - | hypothetical protein Pput_4120 4629181 - 4628933 - | hypothetical protein Pput_4121 4629459 - 4629178 - | hypothetical protein TERM 3591 4629382 - 4629363 - G 74 -10 -3.68529 | gap 1, opp_overlap 4629355 AGGCCATCAGGGAAA CGCCCAGCT TGT AGC-GGGCG TCCGGGTAAGGTCGG Pput_4122 4629834 - 4629460 - | hypothetical protein TERM 3592 4629874 - 4629855 - R 100 -12.8 -5.24129 | CTGCTCCATAAAAAA GCCCCGGC ATTT GCCAGGGC CCAGAAACGACAAAG TERM 3593 4629908 - 4629889 - R 73 -8.5 -4.17701 | opp_overlap 4629889 CCCAGAAACGACAAA GCCCAGC TCAATG GCCGGGC TTTTGTAGTGCCACT TERM 3594 4629889 - 4629908 + r 74 -7 -4.4648 | opp_overlap 4629889 CCCAGAAACGACAAA GCCCAGCT CAAT GGCCGGGC TTTTGTAGTGCCACT Pput_4123 4630680 - 4629994 - | hypothetical protein Pput_4124 4631008 - 4630691 - | hypothetical protein Pput_4125 4631172 - 4631005 - | hypothetical protein Pput_4126 4632467 - 4631169 - | phage integrase family protein TERM 3595 4631276 - 4631262 - G 78 -10 -3.98804 | CGAAATTTCAAATAA GGCCTT GGT AAGGCC GTGAATGGCTGCAAA Pput_4127 4632892 - 4632464 - | VRR-NUC domain-containing protein Pput_4128 4633185 - 4632889 - | hypothetical protein Pput_4129 4633979 - 4633185 - | IstB ATP binding domain-containing protein Pput_4130 4634826 - 4633969 - | phage replication protein O TERM 3596 4634180 - 4634168 - G 71 -9.1 -3.76373 | GGCTGAATACCCAAA GCCAG ACA CTGGC GGAGCTTCTCGTTCA TERM 3597 4634460 - 4634492 + g 74 -6.2 -4.39287 | gap 1, overlap 4634461 4634470 TCTGTTTCGACTCTT C-GCCGATTCGGACC ACTT GAGCCGAGTCGGCTG TTTTGGTCTGATTCG TERM 3598 4634461 - 4634490 + g 74 -9.9 -3.7948 | overlap 4634460 4634470 CTGTTTCGACTCTTC GCCGATTCGGACC ACTT GAGCCGAGTCGGC TGTTTTGGTCTGATT TERM 3599 4634858 - 4634873 + H 100 -7.5 -5.90981 | opp_overlap 4634857 4634858 ATGCTGTAGAGAAAG CCGCC CTGCCA GGCGG TTTTTTTTCGTCTGC Pput_4131 4635265 - 4636086 + | putative phage repressor TERM 3600 4636120 - 4636103 - T 75 -9.8 -3.7104 | opp_overlap 4636103 4636097 ACTCAGATTCAAGAA GCCCGC GTAATA GCGGGC TTTTCGTACCTTCAA TERM 3601 4636103 - 4636120 + T 83 -9.8 -4.30978 | opp_overlap 4636103, overlap 4636097 ACTCAGATTCAAGAA GCCCGC GTAATA GCGGGC TTTTCGTACCTTCAA Pput_4132 4636446 - 4636132 - | hypothetical protein Pput_4133 4636853 - 4637077 + | hypothetical protein Pput_4134 4637208 - 4637591 + | response regulator receiver protein Pput_4135 4637611 - 4637949 + | hypothetical protein Pput_4136 4637946 - 4638443 + | single-strand binding protein Pput_4137 4638446 - 4638607 + | hypothetical protein Pput_4138 4638928 - 4639533 + | hypothetical protein Pput_4139 4639621 - 4640400 + | hypothetical protein Pput_4140 4640397 - 4641272 + | hypothetical protein TERM 3602 4641550 - 4641516 - g 73 -6.5 -4.28994 | gap 2, opp_overlap 4641545 GACCAGGCAGTAAAA GAGTGGAACA-AGC-GC GCA GCAGCTGTGCCCCACCC AGACCCTATAGCCTG TERM 3603 4641993 - 4641974 - g 70 -7.9 -4.07568 | TGCGCTGCTGCAAAA GCTGAAG GAGACA CTTCAGC GCGAATACTGGGATG Pput_4141 4641279 - 4642220 + | hypothetical protein Pput_4142 4642217 - 4642369 + | hypothetical protein Pput_4143 4642419 - 4643213 + | hypothetical protein Pput_4144 4643210 - 4643479 + | hypothetical protein Pput_4145 4643476 - 4643757 + | hypothetical protein Pput_4146 4643754 - 4644149 + | hypothetical protein Pput_4147 4644146 - 4644502 + | hypothetical protein Pput_4148 4644733 - 4645125 + | hypothetical protein Pput_4149 4645107 - 4645355 + | hypothetical protein TERM 3604 4646027 - 4645991 - g 89 -10.7 -4.30576 | opp_overlap 4645995 4645996, overlap 4645993 CTTCGACCAGCAAAA GACCGGAGCCAAGCTCA TTG TGGGCATGACCCCGGAC CTTGAACAGCTGATT TERM 3605 4646025 - 4645993 - g 78 -11.9 -3.7574 | opp_overlap 4645995 4645996, overlap 4645991 TCGACCAGCAAAAGA CCGGAGCCAAGCTCA TTG TGGGCATGACCCCGG ACCTTGAACAGCTGA Pput_4150 4645368 - 4646348 + | phage integrase family protein TERM 3606 4646375 - 4646346 - T 81 -12.9 -3.63266 | opp_overlap 4646352 4646353, overlap 4646347 4646353 AAAACTGATCGGAAA TGAAAAAGCCGCC TTTC GGCGGCCTTTTCT CGGAGGTGATTCAGC TERM 3607 4646374 - 4646347 - T 86 -16.4 -2.77236 | opp_overlap 4646352 4646353, overlap 4646346 4646353 AAACTGATCGGAAAT GAAAAAGCCGCC TTTC GGCGGCCTTTTC TCGGAGGTGATTCAG TERM 3608 4646352 - 4646369 + T 79 -8.3 -4.37886 | opp_overlap 4646347 4646346 4646353, overlap 4646353 GATCGGAAATGAAAA AGCCGCC TTTC GGCGGCC TTTTCTCGGAGGTGA TERM 3609 4646368 - 4646353 - T 100 -11.8 -4.99134 | opp_overlap 4646352 4646353, overlap 4646347 4646346 ATCGGAAATGAAAAA GCCGCC TTTC GGCGGC CTTTTCTCGGAGGTG TERM 3610 4646353 - 4646368 + T 77 -11.8 -3.2241 | opp_overlap 4646353 4646347 4646346, overlap 4646352 ATCGGAAATGAAAAA GCCGCC TTTC GGCGGC CTTTTCTCGGAGGTG Pput_4151 4647257 - 4646532 - | zeta toxin family protein TERM 3611 4647516 - 4647506 - g 74 -4.6 -4.66833 | CTGGAAGCTGAAAAA CCAG CAC CCGG ACCAGCTGATGTTCT TERM 3612 4649770 - 4649752 - g 70 -10.2 -3.64703 | GCCCTGCCAGCCAAA GCTACGGC CTG GCCGTTGC GCAGCTGGCCGGCGT Pput_4152 4647450 - 4650023 + | DNA mismatch repair protein Pput_4153 4650164 - 4650487 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3613 4650501 - 4650528 + T 100 -15 -4.25104 | opp_overlap 4650468 4650508, overlap 4650508 4650518 GATAGCGCCCAGACG CGAAAAAGGCCC TTCG GGGCCTTTTTTG TTTTCCTACGGGCAA TERM 3614 4650521 - 4650508 - T 87 -9.5 -4.64766 | opp_overlap 4650501 4650508 4650518 CCCAGACGCGAAAAA GGCCC TTCG GGGCC TTTTTTGTTTTCCTA TERM 3615 4650508 - 4650521 + T 100 -9.5 -5.83211 | opp_overlap 4650508, overlap 4650501 4650518 CCCAGACGCGAAAAA GGCCC TTCG GGGCC TTTTTTGTTTTCCTA TERM 3616 4650549 - 4650571 + T 82 -2.6 -5.48825 | gap 1, opp_overlap 4650550 4650551, overlap 4650518 4650550 4650550 CTACGGGCAAAAAAA AG-GGGCGG TTTGAC CCGCCCACA TTTTTTTCCGTAGTC TERM 3617 4650569 - 4650550 - T 100 -6.3 -5.76949 | opp_overlap 4650518 4650549 4650550 4650550, overlap 4650551 TACGGGCAAAAAAAA GGGGCGG TTTGAC CCGCCCA CATTTTTTTCCGTAG TERM 3618 4650568 - 4650551 - T 79 -9.8 -4.05085 | opp_overlap 4650518 4650550 4650550 4650549, overlap 4650550 ACGGGCAAAAAAAAG GGGCGG TTTGAC CCGCCC ACATTTTTTTCCGTA TERM 3619 4651010 - 4650977 - T 95 -14.8 -3.85698 | gap 1, opp_overlap 4650981 4650983, overlap 4650983 GCTTTTCGCCACAAA CAAAA-ACGCCCCGA GATCA TCGGGGCGTCTTTTG TTACAGCGCTAGCTA TERM 3620 4650981 - 4651005 + T 95 -11.4 -4.63486 | opp_overlap 4650977 4650983, overlap 4650983 TTCGCCACAAACAAA AACGCCCCGA GATCA TCGGGGCGTC TTTTGTTACAGCGCT TERM 3621 4651003 - 4650983 - T 100 -14 -5.38054 | opp_overlap 4650981 4650983, overlap 4650977 CGCCACAAACAAAAA CGCCCCGA GATCA TCGGGGCG TCTTTTGTTACAGCG TERM 3622 4650983 - 4651003 + T 95 -14 -3.93367 | opp_overlap 4650983 4650977, overlap 4650981 CGCCACAAACAAAAA CGCCCCGA GATCA TCGGGGCG TCTTTTGTTACAGCG Pput_4154 4652030 - 4651023 - | RNA polymerase sigma factor RpoS TERM 3623 4651358 - 4651401 + g 70 -8 -4.07885 | opp_overlap 4651358, overlap 4651359 CGTCTACCGAAGACA CCCGCTCGTTCAGGCCAAGC ATGC GCTTGACCTCGGCGACCGGC TTTTCCAGCAAGGTG Pput_4155 4652927 - 4652139 - | peptidase M23B pcm 4653908 - 4653234 - | protein-L-isoaspartate O-methyltransferase surE 4654657 - 4653908 - | stationary phase survival protein SurE truD 4655703 - 4654645 - | tRNA pseudouridine synthase D ispF 4656173 - 4655700 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 3624 4656201 - 4656181 - R 100 -12.6 -5.65177 | opp_overlap 4656178 4656181 ATACGCATAAAAAAA CGCCCTGA ATGAG TCAGGGCG TGATTCTACCTGCTT TERM 3625 4656181 - 4656201 + r 74 -12.6 -2.85484 | opp_overlap 4656181, overlap 4656178 ATACGCATAAAAAAA CGCCCTGA ATGAG TCAGGGCG TGATTCTACCTGCTT Pput_4160 4657140 - 4656286 - | S-formylglutathione hydrolase TERM 3626 4656918 - 4656945 + g 71 -13.4 -2.6176 | gap 1, overlap 4656918 CGATGATCAGCCCCA GCTCGGCGGCCAG ACG CTGGGCGCCG-GC CTTCTGCATGAAGTT TERM 3627 4656918 - 4656946 + g 72 -12.3 -3.36803 | overlap 4656918 CGATGATCAGCCCCA GCTCGGCGGCCAG ACG CTGGGCGCCGGCC TTCTGCATGAAGTTC Pput_4161 4658261 - 4657149 - | S-(hydroxymethyl)glutathione dehydrogenase TERM 3628 4659134 - 4659167 + G 79 -15.4 -2.87132 | opp_overlap 4659143 GTGTCGCTGCTGGAG GCGCACCA-ACCGCCG AATA CGGCGGTGTGG-GCGC TGTATCCGCAGCAGA TERM 3629 4659158 - 4659143 - g 70 -11.8 -3.15544 | opp_overlap 4659134 CTGGAGGCGCACCAA CCGCCG AATA CGGCGG TGTGGGCGCTGTATC Pput_4162 4658369 - 4659265 + | LysR family transcriptional regulator ispD 4660096 - 4659389 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Pput_4164 4660374 - 4660093 - | septum formation initiator TERM 3630 4660224 - 4660237 + g 76 -8.1 -4.12188 | GCACACGATTACGCT CGAGC AAGC GCTCG TTTTCGGCATGCTGA TERM 3631 4660458 - 4660428 - R 87 -16.3 -3.01712 | gap 1, opp_overlap 4660435, overlap 4660431 4660435 TCGGGGCCTCGAATA GCACGAAGCCTGGC CGAG GCCAGGCTTCGT-C GACAGAAACCCGTTA TERM 3632 4660456 - 4660431 - R 93 -19.1 -2.73875 | opp_overlap 4660435, overlap 4660428 4660435 GGGCCTCGAATAGCA CGAAGCCTGGC CGAG GCCAGGCTTCG TCGACAGAAACCCGT TERM 3633 4660435 - 4660452 + r 75 -12.7 -3.14132 | opp_overlap 4660431 4660428 4660435 CTCGAATAGCACGAA GCCTGGC CGAG GCCAGGC TTCGTCGACAGAAAC TERM 3634 4660452 - 4660435 - R 78 -12.7 -3.27923 | opp_overlap 4660435, overlap 4660431 4660428 CTCGAATAGCACGAA GCCTGGC CGAG GCCAGGC TTCGTCGACAGAAAC eno 4661829 - 4660540 - | phosphopyruvate hydratase TERM 3635 4661950 - 4661927 - R 70 -12.4 -2.56596 | opp_overlap 4661935 GGCCTGATGAAGGGA GCCCCTGACC GACT GGTCAGGGGT GGATCGGGCGGTACT Pput_4166 4662829 - 4661984 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 3636 4662670 - 4662710 + g 71 -12.5 -3.02461 | opp_overlap 4662660 4662673, overlap 4662673 4662674 CGAAACTGGCCTTGA ACACGTACGGGATACCGAG CTT CTCGGTAACCCGCACGTAC TCTTCGCAGACCTTC TERM 3637 4662707 - 4662673 - G 93 -20.8 -3.02043 | opp_overlap 4662673 4662670 4662674, overlap 4662660 AACTGGCCTTGAACA CGTACGGGATACCGAG CTT CTCGGTAACCCGCACG TACTCTTCGCAGACC TERM 3638 4662673 - 4662707 + g 87 -18.6 -2.73875 | opp_overlap 4662660 4662673, overlap 4662670 4662674 AACTGGCCTTGAACA CGTACGGGATACCGAG CTT CTCGGTAACCCGCACG TACTCTTCGCAGACC Pput_4167 4664461 - 4662833 - | CTP synthetase TERM 3639 4663011 - 4663037 + g 70 -7.9 -3.99494 | opp_overlap 4663011 4663006 4663003, overlap 4663027 CCGGAAACCACCAGA CCAGCTTCCAC CAGTT GTGGCAGCAGG TTGTTGTTCACTTCG Pput_4168 4664683 - 4664543 - | hypothetical protein Pput_4169 4666012 - 4664729 - | tRNA(Ile)-lysidine synthetase TERM 3640 4666166 - 4666150 - R 75 -11.5 -3.54029 | TGCCATCAATCACAA GGGCCGC AAA ACGGCCC CAGGGCTAATCAGAA Pput_4170 4667135 - 4666182 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 3641 4666535 - 4666561 + g 70 -7.3 -4.09685 | gap 1 CACCGGAACCACCCT CACCGATCA-CG GTAG CGATGATCGGGG TTTTCAGGCGTGCCA dnaE 4670760 - 4667236 - | DNA polymerase III subunit alpha rnhB 4671570 - 4670947 - | ribonuclease HII lpxB 4672699 - 4671572 - | lipid-A-disaccharide synthase TERM 3642 4672421 - 4672439 + g 73 -3.1 -4.67982 | gap 1, overlap 4672421 4672422 GTCAGGGGCGTCGAT G-CCGATG AATA CGTCGGGC TTTTCTTCGATCAGG Pput_4174 4673477 - 4672701 - | UDP-N-acetylglucosamine acyltransferase TERM 3643 4673458 - 4673407 - G 91 -18 -3.20435 | gap 1, overlap 4673389 4673399 CCAACGATCGACCAA GGGCCGACCTCGACGCCGTCGGCCA GCT TGGCCGACGG-ATCGATAATGGCCC GAGGATCAATCGAAT fabZ 4673914 - 4673474 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxD 4675084 - 4674029 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Pput_4177 4675589 - 4675086 - | outer membrane chaperone Skp (OmpH) TERM 3644 4675175 - 4675188 + g 75 -3.7 -4.77157 | CACGCTCGAGGACCA GGTCG TAGC CGCCC TTTTTGATCACTTCC TERM 3645 4675649 - 4675625 - R 78 -12.2 -3.39895 | gap 1 GTTGTCATTAAGCAA GGGCC-GACCT TAGA AGGTCTGGCCC AGAGAGAATTGGAAC Pput_4178 4677994 - 4675634 - | surface antigen (D15) TERM 3646 4677324 - 4677343 + g 72 -4.2 -4.57073 | gap 1, overlap 4677326 TAGTAGGAACGCAGG CGCTCCAGG TCA CC-GGAGAG TTTTTCACGGGCGTA TERM 3647 4678048 - 4678027 - R 90 -12.3 -4.20768 | opp_overlap 4678047 ACTGGCAATAAACAA CCTGCCGTC ACAA AACGGCAGG TTCGCAATTGAGCGA Pput_4179 4679420 - 4678068 - | putative membrane-associated zinc metalloprotease Pput_4180 4680695 - 4679493 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3648 4679985 - 4680005 + g 83 -9 -4.27441 | ATCGAACAACCAGCA GGCTTCGA TCAAC TCGAGGCC TTTGTTCATCATGCT Pput_4181 4681495 - 4680680 - | phosphatidate cytidylyltransferase Pput_4182 4682250 - 4681495 - | undecaprenyl diphosphate synthase TERM 3649 4682130 - 4682164 + g 100 -15.6 -4.56597 | overlap 4682119 4682131 GAACGGCGTCCACAC CCGCCTTGTGCCCGGC CAC GCCGGGCAGCAGGCGC TTTTTCGCCCAGCGG TERM 3650 4682131 - 4682163 + g 93 -19.1 -3.33744 | overlap 4682119 4682130 AACGGCGTCCACACC CGCCTTGTGCCCGGC CAC GCCGGGCAGCAGGCG CTTTTTCGCCCAGCG frr 4682823 - 4682266 - | ribosome recycling factor pyrH 4683563 - 4682820 - | uridylate kinase TERM 3651 4683720 - 4683693 - R 100 -17 -3.85698 | opp_overlap 4683693 4683712, overlap 4683674 CTCCGTTTTGACAAA GAGGCTGCGCGC GTGA GCGGGCAGCCTC TTTGGGGCGACAGAC TERM 3652 4683693 - 4683720 + r 95 -17 -3.53012 | opp_overlap 4683674 4683693, overlap 4683712 CTCCGTTTTGACAAA GAGGCTGCGCGC GTGA GCGGGCAGCCTC TTTGGGGCGACAGAC tsf 4684608 - 4683745 - | elongation factor Ts TERM 3653 4683806 - 4683845 + g 83 -14.4 -3.53343 | overlap 4683784 4683782 TCGTCGACTGGCTTC TCGATGCCTTCGCCTACT TTGA AGTAGGTGAAGGAAACGA TTTCAGCACCGGCTT TERM 3654 4684297 - 4684336 + g 77 -13 -3.66286 | gap 1, overlap 4684285 4684314 AGCGGCGTCGGTCAG CTTC-TGGGCGAAGGCTTC TTC GAGGCTTTCGGCCACGAAG TTCTTGAAGTCGTCT TERM 3655 4684399 - 4684453 + g 74 -4.9 -4.58283 | gap 1, overlap 4684394 TTCCAGCAGGACGGC GGATG-TACCGTCGGTCTTGACGGCG ATAG CGCCTTCAGCAGCGACGTTGCCAGCC TTTTTGGCGGCCTTG TERM 3656 4684519 - 4684534 + g 78 -6.8 -4.62783 | overlap 4684510 4684512 CTCGATGTCGCCGCC GGCCTT TTCC AGGGCC TTTTTGCAATCCATC TERM 3657 4684762 - 4684748 - R 95 -12.8 -4.59853 | opp_overlap 4684748 TCAAGGTGGCAAAAA GGGGGC AAA GCCCCC TTTTTGCGTGCCAAG TERM 3658 4684748 - 4684762 + r 95 -12.8 -4.65895 | opp_overlap 4684748 TCAAGGTGGCAAAAA GGGGGC AAA GCCCCC TTTTTGCGTGCCAAG rpsB 4685531 - 4684794 - | 30S ribosomal protein S2 Pput_4187 4685878 - 4686660 + | methionine aminopeptidase glnD 4686702 - 4689404 + | PII uridylyl-transferase Pput_4189 4689435 - 4690631 + | hypothetical protein Pput_4190 4692383 - 4690737 - | Na+/H+ antiporter Pput_4191 4692635 - 4692913 + | plasmid maintenance system killer Pput_4192 4692922 - 4693221 + | XRE family plasmid maintenance system antidote protein TERM 3659 4693267 - 4693241 - f 83 -10.1 -4.2461 | gap 1, opp_overlap 4693248, overlap 4693243 ATCCTGATCAATAAA CAGGGGCGCCAC GGGC GTGGCGCCGC-G AGGATCGTTCCCGCA TERM 3660 4693266 - 4693243 - f 88 -13.8 -3.72374 | opp_overlap 4693248, overlap 4693241 CCTGATCAATAAACA GGGGCGCCAC GGGC GTGGCGCCGC GAGGATCGTTCCCGC Pput_4193 4693337 - 4693693 + | arsenate reductase and related Pput_4194 4693725 - 4694759 + | tetrahydrodipicolinate N-succinyltransferase-like protein TERM 3661 4694817 - 4694788 - f 100 -20.1 -3.03124 | opp_overlap 4694788 TTTGAGGTGTTAAGA TCGGGTCTGGCGC CAAT GCACCAGACCCGA TTTTCATTCCAGGCC TERM 3662 4694788 - 4694817 + F 100 -17.9 -4.4078 | opp_overlap 4694788 TTTGAGGTGTTAAGA TCGGGTCTGGCGC CAAT GCACCAGACCCGA TTTTCATTCCAGGCC Pput_4195 4694841 - 4696046 + | aminotransferase, class V Pput_4196 4696043 - 4696453 + | Fe-S metabolism associated SufE Pput_4197 4697371 - 4696562 - | UBA/THIF-type NAD/FAD binding protein TERM 3663 4697598 - 4697616 + G 74 -6 -4.4261 | CTCCGCCCCCGCCTG GCCAGA ACAGATC TCTGGC TTTTCGTATTCGCCG Pput_4198 4697491 - 4700082 + | glycosyl transferase family protein TERM 3664 4700660 - 4700674 + G 74 -9.2 -3.96148 | opp_overlap 4700659 GACTACCCGAACCAC CGCGGC AAG GTCGCG TTTCTGATCACCAGC Pput_4199 4700273 - 4701424 + | succinyl-diaminopimelate desuccinylase TERM 3665 4702185 - 4702156 - g 74 -5 -4.58395 | GCCAGCGCCGAAAAA CGTGCCCGGG-TGA TCGA CCAGCCCGAGC-CG TTCGAGGTCACGGTT Pput_4200 4701424 - 4702236 + | rRNA (guanine-N(1)-)-methyltransferase TERM 3666 4702589 - 4702566 - g 73 -11 -3.65201 | GAAGACGGGGAAGAA GATGCTGACC GCTG GGTCCGCATC AGCGCCGACGGTGAA Pput_4201 4702254 - 4702631 + | hypothetical protein TERM 3667 4702729 - 4702679 - T 82 -14.8 -3.03124 | gap 3, opp_overlap 4702682 GTTTACCCGCGAACA CGGGCCACGCCCGTG--GCAGCCAC CGTG GTGGCTGCTTCGCGGGCA-AGCCCG CTCCTACGGCTTGAA Pput_4202 4702963 - 4702754 - | cold-shock DNA-binding domain-containing protein TERM 3668 4703506 - 4703495 - g 81 -7.2 -4.46212 | overlap 4703496 4703497 GCCGCCAGGACAAAA GCGG CGCC CCGC CCACCCTCGAACGCC TERM 3669 4703781 - 4703755 - g 85 -10 -4.35483 | GTGCAGCACAACAAA GGCCACGAGCGC ACC GTGCGCATGGCC CAGCGCCTGATGCGC TERM 3670 4704776 - 4704740 - g 76 -10.2 -3.85698 | overlap 4704741 CCCGCCTGGGAGAAA CCG-TGGCCCGCCACCTC AAC GAGGCGGCG-GCCATCAA CCCGGTCAACCTGGT TERM 3671 4705086 - 4705128 + G 70 -12.8 -2.87463 | overlap 4705109 GCTGCTGGCCAGCTT CTTCCTCAGCAGTTCACG CATGAGC CGTGAACTGCTGGGCCAG TATGTGCACGCGCTT TERM 3672 4705587 - 4705570 - g 73 -8.4 -3.99324 | GGTTATCACGACAAA CTCGGC GAGCTG GCCGAG GGCGTGGCCAAGCGA Pput_4203 4703197 - 4705683 + | glycerol-3-phosphate acyltransferase TERM 3673 4705747 - 4705713 - f 74 -10.6 -3.60818 | GCAAAATCCGCTAAA GTCCGTGGGGTTGGCC ACA AGCCAGCTCCAAGGAC ACCGGAGATTCCATG Pput_4204 4705760 - 4706158 + | hypothetical protein Pput_4205 4706192 - 4706878 + | hypothetical protein TERM 3674 4707100 - 4707149 + T 72 -10.8 -3.53012 | gap 3, opp_overlap 4707100, overlap 4707147 GTATTCGCGGGTAAA CCCGCTCCTAAACGGCGG-CGGGGT TGG ACACAGGCCGTCGT--AGGAGCGGG TTTACCCGCGAAGGG TERM 3675 4707155 - 4707187 + T 87 -16.9 -3.05066 | opp_overlap 4707166, overlap 4707147 TAGGAGCGGGTTTAC CCGCGAAGGGAGGGC TAA GCCCTCCCCCTGCGG TCTTCAGCCCTTCTT Pput_4206 4710256 - 4707191 - | acriflavin resistance protein Pput_4207 4711363 - 4710263 - | RND family efflux transporter MFP subunit TERM 3676 4710426 - 4710444 + g 70 -8 -4.07618 | opp_overlap 4710411 GCCCCCAGGCGCACG GTCGCCCG CTC CAGGCGGC TTTCCTTGTTCACCC TERM 3677 4711249 - 4711291 + g 86 -16.3 -3.14132 | gap 2 CTTCGGCCGGCTGTG GCTGCACCACCAGCGCCGGGC GCG GCGCGGCG--GGTGGGGCAGC TTCCTGGCCACACGC Pput_4208 4711614 - 4712255 + | TetR family transcriptional regulator Pput_4209 4713101 - 4712325 - | hypothetical protein Pput_4210 4713206 - 4713826 + | hypothetical protein Pput_4211 4714518 - 4713829 - | extensin family protein Pput_4212 4715348 - 4714518 - | PEP phosphonomutase and related enzymes-like protein Pput_4213 4716246 - 4715377 - | hypothetical protein TERM 3678 4715833 - 4715809 - G 77 -2 -5.00884 | gap 1 ACCCTTGGCAAAAAA GGCC-TGGTTG CGCA CTTCCACGGCC ACGGGCACGGCAATC Pput_4214 4716540 - 4716250 - | hypothetical protein Pput_4215 4717346 - 4716672 - | peptidase M22, glycoprotease TERM 3679 4717507 - 4717491 - R 100 -15.1 -4.07568 | opp_overlap 4717461 CTTGCGTCGCGAAAA GGGCCGC AAA GCGGCCC CAGGGTTTCAGCGGT TERM 3680 4717539 - 4717555 + r 82 -13.7 -3.53012 | TCACACCATTGTATG GGGCTGC TCT GCAGCCC TTTCGCGACACAAGG adk 4718268 - 4717618 - | adenylate kinase TERM 3681 4717897 - 4717922 + g 73 -6.7 -4.2704 | gap 1, overlap 4717898 CGAGGCCAGGTGCAC GCGGCGGCCAGC CAT GC-GGCCGACGA TTTCTTCGTCGTCCA Pput_4217 4721153 - 4718526 - | phosphoenolpyruvate carboxylase Pput_4218 4721414 - 4721758 + | hypothetical protein Pput_4219 4722050 - 4722448 + | hypothetical protein TERM 3682 4723115 - 4723147 + G 70 -9.8 -3.54129 | overlap 4723116 4723120 GCGTGCGCATGGCAC TGGTGCGTGCCGGG GTAGA TCCGGCGCGTATCG TTTCCCAGGGCTATG Pput_4220 4722499 - 4723290 + | OmpA/MotB domain-containing protein TERM 3683 4723313 - 4723333 + T 100 -15.4 -4.71418 | opp_overlap 4723313 TAGCTGAAAGGACAA GCCCCGCG ATCGA CGCGGGGC TTTCTTTTGCCTGTT TERM 3684 4723333 - 4723313 - T 90 -15.4 -3.60865 | opp_overlap 4723313 TAGCTGAAAGGACAA GCCCCGCG ATCGA CGCGGGGC TTTCTTTTGCCTGTT Pput_4221 4723794 - 4723468 - | hypothetical protein Pput_4222 4724651 - 4723791 - | alpha/beta fold family hydrolase-like protein Pput_4223 4726014 - 4724686 - | hypothetical protein TERM 3685 4725453 - 4725484 + g 78 -11.7 -3.70037 | gap 1, overlap 4725444 4725456 TCAGCCGGTGCTGGA GGATCTCCACCGCC TCCTT GGCGGTG-AGATTC TTTGGCTCATCCTTG TERM 3686 4725456 - 4725481 + g 78 -9.8 -3.97674 | gap 1, overlap 4725444 4725453 GCCGGTGCTGGAGGA TCTCCACCGCC TCCTT GGCGGTG-AGA TTCTTTGGCTCATCC Pput_4224 4726651 - 4726103 - | hypothetical protein Pput_4225 4727386 - 4726682 - | TetR family transcriptional regulator TERM 3687 4727451 - 4727481 + r 100 -20.6 -3.53012 | opp_overlap 4727451 CCCTTCGCGGGTAAA CCCGCTCCTACAAG GCC TTTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 3688 4727481 - 4727451 - R 100 -19.9 -3.53012 | opp_overlap 4727451 CCCTTCGCGGGTAAA CCCGCTCCTACAA GGCCT TTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 3689 4727557 - 4727528 - R 75 -12.9 -3.07307 | opp_overlap 4727534, overlap 4727534 TAAAGCTTCAGGCAA GAAAAAGCCGCCT CGAA AGGCGGCTCGTTC AGCTCACTCAGGCCT TERM 3690 4727534 - 4727551 + r 74 -12.7 -2.73681 | opp_overlap 4727528 4727534 TTCAGGCAAGAAAAA GCCGCCT CGAA AGGCGGC TCGTTCAGCTCACTC TERM 3691 4727551 - 4727534 - R 100 -12.7 -5.10461 | opp_overlap 4727534, overlap 4727528 TTCAGGCAAGAAAAA GCCGCCT CGAA AGGCGGC TCGTTCAGCTCACTC lysS 4729067 - 4727565 - | lysyl-tRNA synthetase TERM 3692 4728972 - 4728992 + g 74 -2.6 -4.8622 | gap 2, opp_overlap 4728967, overlap 4728971 4728969 GGGGAAGGCATTGCC CTTGGCACGC TCG GCG-GC-AAG TTTTTCCTTGCGCAG Pput_4227 4730075 - 4729161 - | peptide chain release factor 2 TERM 3693 4730329 - 4730303 - R 70 -12.2 -2.64099 | opp_overlap 4730309 4730327, overlap 4730302 GCCCGCGAGTATAAC CGAGTCCGCAGC ATG GCGGCAGACCCG CCGGGCGGTCGTATG Pput_4228 4731398 - 4730394 - | response regulator receiver modulated diguanylate cyclase Pput_4229 4732463 - 4731450 - | chemotaxis-specific methylesterase Pput_4230 4734757 - 4732460 - | CheA signal transduction histidine kinase TERM 3694 4734618 - 4734583 - G 95 -20.5 -3.31461 | CATCCACCCCGACAA TGCGCGCTGCCCCCT TGAGCG AGTGGGCAGCGCGCA TGCAAGCCTCGAGCT Pput_4231 4735419 - 4734754 - | putative CheW protein Pput_4232 4736690 - 4735416 - | protein-glutamate O-methyltransferase TERM 3695 4736496 - 4736484 - G 78 -4.7 -4.74103 | GGGGTAACGGAAAAA CCAGG TTT CCGGG ACAATCACCGCTTCG Pput_4233 4737193 - 4736687 - | putative CheW protein Pput_4234 4738821 - 4737199 - | methyl-accepting chemotaxis sensory transducer TERM 3696 4738969 - 4738912 - R 100 -26.3 -3.14344 | GATTGTCGTTAGGAA TTTTGCGCCTGGGGGACCGAGCGCCGC GCGG GCGGCGCTCGATCTCACAGGCGCTGAA TACGCCCCGGCAAGC Pput_4235 4739672 - 4738992 - | hypothetical protein TERM 3697 4740657 - 4740638 - g 78 -3.5 -5.09895 | overlap 4740639 GAGCGATGTAAAAAA CGAAGGC GTGGTT GCCTCCA GCTCCTGGGGCTACA Pput_4236 4739889 - 4741040 + | extracellular solute-binding protein TERM 3698 4741524 - 4741503 - g 73 -6.5 -4.27316 | gap 1, overlap 4741481 GGCCTGAAGGTAAAA GGCG-TGGGC AAG GCCGAACGCC ACAGCCGCGCCGAAG TERM 3699 4742166 - 4742132 - g 70 -7.6 -4.08216 | overlap 4742107 TGACCGCTGGCAAAA GCAGGTGCAGGCCTGG CAG CCCGGGCAACGCCTGC AGGCGCACTGGCCCC Pput_4237 4741191 - 4742222 + | spermidine/putrescine ABC transporter ATPase subunit Pput_4238 4742224 - 4743135 + | binding-protein-dependent transport systems inner membrane component Pput_4239 4743125 - 4743931 + | binding-protein-dependent transport systems inner membrane component TERM 3700 4743992 - 4743972 - g 73 -12.6 -3.16191 | GCAGATGCTGATCAA TGGCCAGC TAGTC GCTGGCCA AGGCCCGGCCTGGAC Pput_4240 4743949 - 4745373 + | gamma-aminobutyraldehyde dehydrogenase TERM 3701 4745424 - 4745375 - f 70 -12.3 -2.57136 | gap 2, opp_overlap 4745375 4745377, overlap 4745367 4745374 TGATCAAGCACTAAG TGCT-CG-CGTTGACCGAGGGGC TTGAAT GCCCCTCGGTCAACGTCTCAGAA TTTTCCTTCAACCGT TERM 3702 4745375 - 4745424 + F 91 -12.3 -4.41047 | gap 2, opp_overlap 4745367 4745375 4745374, overlap 4745377 TGATCAAGCACTAAG TGCT-CG-CGTTGACCGAGGGGC TTGAAT GCCCCTCGGTCAACGTCTCAGAA TTTTCCTTCAACCGT TERM 3703 4745377 - 4745422 + F 80 -14.9 -2.54166 | gap 2, opp_overlap 4745375 4745374, overlap 4745375 ATCAAGCACTAAGTG CT-CG-CGTTGACCGAGGGGC TTGAAT GCCCCTCGGTCAACGTCTCAG AATTTTCCTTCAACC Pput_4241 4745577 - 4745756 + | hypothetical protein Pput_4242 4745753 - 4746085 + | HicB family protein TERM 3704 4746091 - 4746107 + T 88 -15.1 -3.53012 | opp_overlap 4746091 CTATAGCTGAACCCA GGGCCGC TTT GCGGCCC TTTCGCGAAACACGG TERM 3705 4746107 - 4746091 - T 80 -15.1 -2.54523 | opp_overlap 4746091 CTATAGCTGAACCCA GGGCCGC TTT GCGGCCC TTTCGCGAAACACGG Pput_4243 4747260 - 4746154 - | NADH:flavin oxidoreductase/NADH oxidase TERM 3706 4746308 - 4746348 + g 71 -12.6 -3.10715 | opp_overlap 4746308 GCGAGGAAGATGATA TCGGCCT-GGCCGGTGCGCA GGA TGTGC-TCGGCCTGGGCCGG TTCGGTGATCATACC TERM 3707 4747666 - 4747683 + r 78 -14.1 -2.65354 | overlap 4747662 4747661 GCCTTGCGTCGCGAT GCGCCGC GCGG GCGGCGC TGGATTTCCGCTACA Pput_4244 4749440 - 4747731 - | single-stranded-DNA-specific exonuclease RecJ Pput_4245 4749991 - 4749449 - | YaeQ family protein Pput_4246 4750122 - 4751321 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 3708 4751729 - 4751719 - g 76 -6.8 -4.4078 | overlap 4751722 GTTGCGCAAGGAAAA CCAG GCG CTGG TGGCACCCTACCTCG Pput_4247 4751342 - 4752217 + | hypothetical protein TERM 3709 4752298 - 4752284 - T 100 -11.4 -4.96501 | GCCCAGAAAAAGAAA CCCCAG GCG CTGGGG AAGACGCCCGGGGCC Pput_4248 4752686 - 4752405 - | hypothetical protein Pput_4249 4753185 - 4752766 - | response regulator receiver protein Pput_4250 4754725 - 4753316 - | threonine synthase Pput_4251 4756089 - 4754785 - | homoserine dehydrogenase Pput_4252 4756916 - 4756173 - | thiol:disulfide interchange protein DsbC TERM 3710 4756980 - 4756968 - R 81 -4.7 -5.0133 | CACCTGCGGAAAAAA CGCGG TGA CCGTG CGGCCCTTGGTGCAA xerD 4757966 - 4757070 - | site-specific tyrosine recombinase XerD TERM 3711 4759205 - 4759182 - g 73 -11 -3.59979 | gap 1, opp_overlap 4759187 CGGTGGTACTGCAAA GCGCCA-CGGC CAG GCCGCTGGCAC GCTTGCTCAAGGTCG Pput_4254 4758035 - 4759840 + | sodium/hydrogen exchanger Pput_4255 4760251 - 4759844 - | thioesterase superfamily protein TERM 3712 4760313 - 4760279 - R 81 -10.9 -4.07568 | gap 1, opp_overlap 4760288, overlap 4760280 4760288 CCTGGGGTTTCAAAA CG-CAAAAAAGCAGCC CGAA GGCTGCTTTTTTCTCG CTAGGCGGCCTCGGC TERM 3713 4760310 - 4760280 - R 73 -12.1 -3.04398 | gap 1, opp_overlap 4760288, overlap 4760279 4760288 CTGGGGTTTCAAAAC GCAAAAAAGCAGCC CGAA GGCTGCTTTTTT-C TCGCTAGGCGGCCTC TERM 3714 4760303 - 4760288 - R 100 -10.4 -5.2696 | opp_overlap 4760288, overlap 4760280 4760279 TCAAAACGCAAAAAA GCAGCC CGAA GGCTGC TTTTTTCTCGCTAGG TERM 3715 4760288 - 4760303 + r 100 -10.4 -5.28176 | opp_overlap 4760288 4760280 4760279 TCAAAACGCAAAAAA GCAGCC CGAA GGCTGC TTTTTTCTCGCTAGG rplS 4760696 - 4760346 - | 50S ribosomal protein L19 trmD 4761491 - 4760739 - | tRNA (guanine-N(1)-)-methyltransferase rimM 4762031 - 4761495 - | 16S rRNA-processing protein rpsP 4762288 - 4762037 - | 30S ribosomal protein S16 TERM 3716 4762464 - 4762480 + r 77 -13.7 -3.02511 | opp_overlap 4762474 AGATTTGCCGGTTGC GCCGCGA AAT TCGCGGC TGTTGCCCCGCTACA TERM 3717 4762486 - 4762501 + r 70 -11.8 -2.58579 | opp_overlap 4762474, overlap 4762485 AATTCGCGGCTGTTG CCCCGC TACA GCGGGG GTTCTGGGCGCTTGC Pput_4260 4763923 - 4762547 - | signal recognition particle protein TERM 3718 4762818 - 4762830 + g 74 -9.1 -3.87869 | TTTTCGGCCGCGCCC TGGGC GTT GCCCA TTTGTGACAGGTTGA TERM 3719 4763724 - 4763706 - G 74 -10.2 -3.73953 | ACGATCTTCACGAAA GCCTGGCC CGG GGTCAGGC TGCGCGACACCTCGG Pput_4261 4764194 - 4765045 + | cytochrome c assembly protein Pput_4262 4765055 - 4766260 + | transporter-associated region Pput_4263 4766531 - 4767832 + | general substrate transporter TERM 3720 4767870 - 4767928 + T 100 -18.9 -3.48276 | gap 1, opp_overlap 4767870 CCTATCGCGACACAA GGCCGCTCCCACAGGAATAACGCA-GCT TCCA GGCTTACGCGATCCCTGTGGGAGCGGCC TTGTGTCGCGACAGG TERM 3721 4767928 - 4767870 - T 100 -24.8 -3.49475 | gap 1, opp_overlap 4767870 CCTATCGCGACACAA GGCCGCTCCCACAGGAATAACGC-AGC TTCCAG GCTTACGCGATCCCTGTGGGAGCGGCC TTGTGTCGCGACAGG purT 4769153 - 4767972 - | phosphoribosylglycinamide formyltransferase 2 TERM 3722 4769274 - 4769234 - R 74 -11 -3.24925 | ATTCTACACCATCAA CCGGCCACGGCGGCCCGC CGGGC GCGAAATGCCATGGCCAG CCACACCGCGGTTAC Pput_4265 4769697 - 4769230 - | hypothetical protein TERM 3723 4769811 - 4769754 - R 78 -11.9 -3.53012 | gap 1 CCGTTCGCGGGTAAA CCCGCTCCTACAGATGTTGTG-CAGCCC TCA AGGCTGACGCTGTACCTGTGGGAGCGGG CGTGCCCGCGAAGCC Pput_4266 4770097 - 4769894 - | hypothetical protein Pput_4267 4770611 - 4770087 - | hexapaptide repeat-containing transferase TERM 3724 4770640 - 4770655 + r 71 -11.8 -2.77118 | overlap 4770638 GCTGCGACGCAGACG GCGGGG TAGG CCCCGC TCAATTTTCGATGTA Pput_4268 4771288 - 4770656 - | NUDIX hydrolase Pput_4269 4771379 - 4771930 + | NUDIX hydrolase TERM 3725 4772231 - 4772221 - g 72 -2.4 -4.78839 | opp_overlap 4772221 AAGGCGACAAGAAAA CCCC TGA GGGC TTGTACTGGCTGGAC Pput_4270 4771953 - 4772507 + | hypothetical protein TERM 3726 4773311 - 4773268 - g 86 -16 -3.14132 | gap 1, opp_overlap 4773282 4773283 CTTCGCGCCTATGAA CTGGGCGCCACCTTGCTGCCC GGC GAACTGCAAGGCGGCACCC-G CGTGGTCGTGCAGCC TERM 3727 4773675 - 4773730 + G 76 -13.1 -3.40403 | gap 1, opp_overlap 4773671 4773714 CCAGCAAGGCATGCT CAGCGCCAGCGC-CCGGCTGGACCGC AAGCA GCTGATCAACCGCAGCGCTGGCGCAG TTATCGTCCAGCAGA Pput_4271 4772668 - 4774350 + | polypeptide-transport-associated domain-containing protein TERM 3728 4774674 - 4774632 - g 77 -12.7 -3.61398 | gap 1, opp_overlap 4774670 CCTGGTGCTGAACAA CGCCACCGCAGCCGGGCAGT CGCA ACTGGCCGG-TGCCCTGGCG GCCAACCCGCAATTT Pput_4272 4774378 - 4778904 + | filamentous haemagglutinin outer membrane protein Pput_4273 4779703 - 4779068 - | hypothetical protein Pput_4274 4779926 - 4779705 - | hypothetical protein TERM 3729 4781068 - 4781043 - g 71 -8.9 -3.95324 | CACCTTCAAGAACAA GGGCTACGAAG CCCG CATCGAAGCCC GTCACCAGCCGCTCG TERM 3730 4781505 - 4781493 - g 78 -6.9 -4.56133 | overlap 4781487 CCTGAACAAGGAAAA GGCGA TTT CCGCC GACCTGGCGCTGCGC Pput_4275 4780090 - 4782147 + | TonB-dependent receptor TERM 3731 4782232 - 4782177 - f 100 -24.1 -3.14683 | AGATCGGTGTAGGAA CGGGTTCACCCGCGAAGACGATGGT AGGTCA ACCGGCGCATTCGCGGGTGAACCCG CTCCTACACCGGCCT TERM 3732 4782290 - 4782300 + F 100 -5.4 -5.7946 | ACAACAATCCTCTGC GACA ATT TGTC TTTTTTTCTTACAAC TERM 3733 4782369 - 4782410 + F 75 -2.1 -5.1101 | opp_overlap 4782360 ATCGAACAACCTTGT CGCCATATCCATTGAGGGG CTCG CCCTTCGATGCGCTTGCCG TTTTTTCAATAATCA TERM 3734 4783583 - 4783558 - g 70 -10.3 -3.65046 | overlap 4783576 TGCCTATCGCAAGAA CGCCCGCCTGG CCAA CCAGGCCGCCG GCCTCTACGACTACG Pput_4276 4782443 - 4783777 + | carbohydrate-selective porin OprB TERM 3735 4784019 - 4784039 + G 77 -13.3 -3.56092 | overlap 4784020 TTGGCCTGTATGGCC TGGTGCTGC TGG GCAGCACCG TTTGGGCCCTGCTCG TERM 3736 4784020 - 4784038 + G 75 -14.6 -2.73441 | overlap 4784019 TGGCCTGTATGGCCT GGTGCTGC TGG GCAGCACC GTTTGGGCCCTGCTC Pput_4277 4783808 - 4786219 + | Pyrrolo-quinoline quinone TERM 3737 4786336 - 4786320 - f 82 -13.7 -3.53012 | opp_overlap 4786315 CCTTGCGTCGCGAAA GGGCTGC ACA GCAGCCC CGGGGTTTCAGCGTC TERM 3738 4786368 - 4786384 + F 88 -15.1 -3.53012 | opp_overlap 4786364 4786363 ATGCAAATAATGCCG GGGCCGC TTC GCGGCCC TTTCGCGACGCAAGG TERM 3739 4788363 - 4788352 - g 90 -2.2 -5.4833 | TCACCGAAGAAAAAA TGAC CATC GCCA AGCGCCACCTGTGGC Pput_4278 4786749 - 4789166 + | ATP-dependent protease La TERM 3740 4789192 - 4789232 + F 100 -27.7 -3.14132 | CCTCTTCGCGGGCAA GCCCGCGCCTGCACGGGTA CGC TATCCCTGCAGGCGCGGGC TTACTCGCGAAAGGG Pput_4279 4789318 - 4789710 + | secreted protein-like protein Pput_4280 4789800 - 4790543 + | putative methyltransferase TERM 3741 4791239 - 4791229 - g 73 -6.8 -4.26076 | overlap 4791204 4791205 CGAGGGCGACGAAAA CCAG GTG CTGG TGCCTGAGGACCGCT Pput_4281 4790540 - 4791496 + | putative methyltransferase TERM 3742 4791518 - 4791501 - T 100 -14.1 -5.63517 | CGCGCAAATAAAAAA GGCGCCC GCAG GGGCGCC TGAATACACCTGCGG Pput_4282 4791769 - 4791566 - | hypothetical protein Pput_4283 4792079 - 4792753 + | two component heavy metal response transcriptional regulator Pput_4284 4792750 - 4794132 + | heavy metal sensor signal transduction histidine kinase Pput_4285 4794980 - 4794258 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3743 4794346 - 4794324 - G 78 -9.8 -4.08948 | overlap 4794304 GAAGCCGACAAACAA GGCATGCGCC ACC AGCGCATGGC CAATGTTCAGCTCAT TERM 3744 4794851 - 4794881 + g 70 -11.9 -3.15544 | gap 1 GCCGGCGGTCTTCAC GCAGGTGCACGGTG ATGC CATCG-GCGCCTGC TTCCTCGGCGTCCAG recO 4795725 - 4795042 - | DNA repair protein RecO TERM 3745 4795218 - 4795192 - G 75 -12.2 -3.54424 | overlap 4795195 4795209 CTCGATCCCGCGAAA CAGGCCGGGCTG CAA CAGCTCGACCCG CTCCAGGCCGGCATC TERM 3746 4795804 - 4795788 - R 100 -15.1 -4.07568 | opp_overlap 4795786 4795785, overlap 4795798 CTTGTGTCGCGAAAA GGGCCGC AAA GCGGCCC CAGATTTTTAGCTTT era 4796797 - 4795895 - | GTP-binding protein Era TERM 3747 4795924 - 4795952 + g 76 -11 -3.75153 | gap 1, opp_overlap 4795920 4795924 AGCCCAGCGAACGCA GGGCGCGCTCGTC GTCG GACCAGC-CGCCC TTTACCTTGACCCAC rnc 4797479 - 4796790 - | ribonuclease III TERM 3748 4796983 - 4797010 + g 72 -7.6 -4.2243 | GGCAGCTCACAGCTG CGCGACTGCAGG AACT CTTGCAGGCGGG TTTTCGGATCTTTAT TERM 3749 4797640 - 4797605 - R 71 -8.3 -3.89524 | gap 1, overlap 4797606 4797609 AGCCTATGTCAGAAA TGCATTCGGCGCTGTC TGCTG GACAGCGCCGA-TGGG TATCAATGGATCAGG TERM 3750 4797639 - 4797606 - R 73 -11.8 -2.93393 | gap 1, overlap 4797605 4797609 GCCTATGTCAGAAAT GCATTCGGCGCTGTC TGCTG GACAGCGCCGA-TGG GTATCAATGGATCAG TERM 3751 4797637 - 4797609 - R 78 -14.6 -2.7083 | overlap 4797606 4797605 TATGTCAGAAATGCA TTCGGCGCTGTC TGCTG GACAGCGCCGAT GGGTATCAATGGATC Pput_4289 4798497 - 4797643 - | signal peptidase I TERM 3752 4797909 - 4797925 + g 95 -10.1 -4.48987 | CCTTGCGGATCAGGT GTTCGGC CGC GCCGAGC TTTTCCTTGTACAGC TERM 3753 4797975 - 4798015 + g 70 -10.4 -3.55487 | opp_overlap 4797959, overlap 4797976 CCGGCTCGCTGCCCA CCAGTTGTTCGGCAACGG GCTGG CCGTTGACGAACAGCCGC TTGTCGTTGGTGTAG TERM 3754 4797976 - 4798014 + g 72 -13.9 -2.7281 | opp_overlap 4797959, overlap 4797975 CGGCTCGCTGCCCAC CAGTTGTTCGGCAACGG GCTGG CCGTTGACGAACAGCCG CTTGTCGTTGGTGTA Pput_4290 4800293 - 4798503 - | GTP-binding protein LepA TERM 3755 4799464 - 4799444 - G 71 -12.6 -3.03159 | TGAAGCCTGGCAACA CCTCGACC TCAGG GGTCGAGG ACAGGGTCAGGGTGT TERM 3756 4800330 - 4800320 - R 71 -6.8 -4.1964 | overlap 4800312 4800321 GTCAACACTCGAAAA GGCT GCG AGCC GGACGCCCGCCGAAA TERM 3757 4800463 - 4800446 - R 100 -12.7 -4.76644 | opp_overlap 4800446 4800460 AAGATTCATGAAAAA GGGCAGC CGAA GCTGCCC TTTCGCCTTGCGAAA TERM 3758 4800446 - 4800463 + r 81 -12.7 -3.66178 | opp_overlap 4800446, overlap 4800460 AAGATTCATGAAAAA GGGCAGC CGAA GCTGCCC TTTCGCCTTGCGAAA Pput_4291 4801916 - 4800483 - | protease Do TERM 3759 4801995 - 4801972 - R 83 -11 -4.00066 | TGCACAACGCAGAAA GGCCAGGCTC TTCA AAGCCTGACC TATAGAAAATTTGCC TERM 3760 4802103 - 4802084 - R 100 -15 -4.18018 | opp_overlap 4802072 GCTCGGCACGCAAAA GCGCGCCA TTAC TGGCGCGC CTGGGCATCCTGGGG Pput_4292 4803057 - 4802092 - | sigma E regulatory protein, MucB/RseB TERM 3761 4802305 - 4802294 - G 72 -2.2 -4.75308 | gap 1 ATGAACACCGAAAAA CGCGC CAG GC-CG TCGTCATACATCAAG Pput_4293 4803660 - 4803070 - | anti sigma-E protein, RseA TERM 3762 4803522 - 4803557 + g 73 -11.1 -3.58343 | CCTTGTGCATGGCTG CTCGGGCAACCTGGT AACGCG ACCAGGTGGCACGGG TTTCGGCGTCGTCGA TERM 3763 4803677 - 4803723 + r 86 -11.4 -4.13246 | overlap 4803674 GCGGTTCCTCTCTTG GCGCTGTCGCCGCTGTCTCAGG TTT CCTGCAACAACGGCTGCAGGGC TTTATCTATGGCCTC algU 4804275 - 4803694 - | RNA polymerase sigma factor AlgU Pput_4295 4804711 - 4806315 + | L-aspartate oxidase Pput_4296 4806892 - 4806434 - | hypothetical protein Pput_4297 4807130 - 4806876 - | hypothetical protein TERM 3764 4807188 - 4807163 - H 80 -14.7 -2.94099 | gap 1, opp_overlap 4807163 4807162 4807165 GGCCGCCAGTATACA GCCCGGCG-CGC GAA GCGACACCGGGC GTTGGTCTAGTCACC TERM 3765 4807163 - 4807188 + H 73 -12.5 -2.57468 | gap 1, opp_overlap 4807163, overlap 4807162 4807165 GGCCGCCAGTATACA GCCCGGCG-CGC GAA GCGACACCGGGC GTTGGTCTAGTCACC Pput_4298 4807264 - 4808205 + | glycine cleavage T protein (aminomethyl transferase) Pput_4299 4808255 - 4809067 + | putative signal transduction protein TERM 3766 4809126 - 4809077 - T 100 -19.3 -3.04144 | CGCTGAGCTGTAACA GCCTGCCTGGGCCCTTTCGCAGG TGAG CCCGCGAAAGGGTCGACACAGGC AAACCCTCAATCCGC Pput_4300 4810512 - 4809133 - | integral membrane sensor signal transduction histidine kinase Pput_4301 4811176 - 4810505 - | two component transcriptional regulator TERM 3767 4811271 - 4811255 - H 75 -9.5 -3.85698 | opp_overlap 4811243 GCCCCTCGTGACAAA CCTTTCA CGC TGAAAGG TTAGCGAAAGGTTCG TERM 3768 4811343 - 4811329 - H 84 -7.1 -5.00616 | TTCGCGCCGAAAAAA GCACC AGCAA GGTGC AACGAATAAGAACAA Pput_4302 4811377 - 4812666 + | outer membrane porin Pput_4303 4812713 - 4813693 + | hypothetical protein Pput_4304 4813893 - 4814351 + | hypothetical protein TERM 3769 4815266 - 4815241 - g 70 -10.3 -3.55622 | opp_overlap 4815246 GGCAAGTTCGGCAAA GGCGATGCCCG TGGC CTGGCAGCGCC GGAAACGGCCATTGG Pput_4305 4814353 - 4815867 + | hypothetical protein TERM 3770 4815897 - 4815945 + G 100 -29.7 -3.61356 | overlap 4815890 4815904 TGTTCGTCGCGACCG GGCTGGTCGGCCTTGCTGGCGGT TTT GCCGCCAGCAAGGTCGGCTGGCC TTTGCCATGGATGGT Pput_4306 4815860 - 4816915 + | putative ammonia monooxygenase Pput_4307 4817006 - 4818688 + | 5'-nucleotidase domain-containing protein TERM 3771 4818720 - 4818757 + T 70 -11.2 -3.01924 | gap 1 CCCCGGTTTCTCACA GCGGGGGC-AGTGCCCA GTCGA TGGGCCCGAGTCCCCGC TGTTCGAGGAAGCTG Pput_4308 4819407 - 4818715 - | uracil-DNA glycosylase TERM 3772 4820009 - 4820030 + G 84 -8.7 -4.45068 | gap 1, overlap 4820004 CCAGTTGGTTCCTGG CCCGGC-TGC CGG GCAAGCTGGG TTTGTTCTTCGGCCT TERM 3773 4820544 - 4820532 - g 74 -9.1 -3.89695 | GCTGGACAAAGACAA CCAGC CGC GCTGG CACTGGCCTGATGTG Pput_4309 4819534 - 4820640 + | enoyl-CoA hydratase/isomerase Pput_4310 4821134 - 4820685 - | hypothetical protein TERM 3774 4821661 - 4821676 + G 73 -3.2 -4.80882 | opp_overlap 4821661 GGTCATGGGCAAGCA GGACAT CTTC ACGTCC TTTTTCGTGTCCGAT Pput_4311 4821347 - 4822828 + | diguanylate cyclase Pput_4312 4822821 - 4823033 + | hypothetical protein Pput_4313 4823042 - 4823740 + | pseudouridine synthase TERM 3775 4824425 - 4824398 - g 75 -14.8 -2.70932 | GGGGTGGCGCAAGCA CGCTGCTGGCGC TGGC GCACCAGCCGCG GTACGTGAAGAAGGC Pput_4315 4824076 - 4824963 + | alpha/beta hydrolase fold TERM 3776 4824964 - 4825015 + F 81 -2.8 -5.31456 | opp_overlap 4824989 GCATTTGCCATCTGA GCGGCTCGGCGCCTTGTAGC AAATACCCGCAG GCCACGGGGCGCCGACAAGC TTTTTTATAACTTGG TERM 3777 4825195 - 4825208 + F 95 -8.1 -5.54079 | opp_overlap 4825195 TCATCGCAGTCAAAA GGAGC CTTG GCTCC TTTTTTCGTTTTTCA TERM 3778 4825208 - 4825195 - f 73 -8.1 -4.1899 | opp_overlap 4825195 TCATCGCAGTCAAAA GGAGC CTTG GCTCC TTTTTTCGTTTTTCA Pput_4316 4825359 - 4827065 + | sulfate transporter TERM 3779 4827149 - 4827120 - f 82 -13.6 -3.53012 | CCTTTCGCGGGTAAA CCCGCTCCTACA TGGACT TGTAGGGGCGGG TTCACCCGCGAAAGG Pput_4317 4827268 - 4828278 + | hypothetical protein Pput_4318 4829526 - 4828312 - | hypothetical protein Pput_4319 4830309 - 4829692 - | hypothetical protein TERM 3780 4829829 - 4829794 - G 74 -9.6 -3.9009 | gap 1 AATGCACTCGACAAA GCCCTGCAAGGTGCGGC CCT GGCGCACC-TGCTCGGC CAAACGGGCACCGAT TERM 3781 4830013 - 4829980 - G 74 -11.6 -3.53012 | GTTCTGCTCGCGAAA CTGCTGGCGGGCCA GGCGCG CGGCACGCCAGCGG CGCAAGGCACGGGGG Pput_4320 4830496 - 4832787 + | glycoside hydrolase family 3 protein TERM 3782 4832853 - 4832796 - f 95 -11.7 -4.65895 | opp_overlap 4832794 4832796 4832802, overlap 4832837 GCTTTGACTGAAAAA GGCCGCCTGTTCCGGCCTCTTCTCGGG TAAA CCCGCGAAGAGGCCGGCCCCGTTATCC CACCACCGGATCCGC TERM 3783 4832802 - 4832847 + F 95 -18.9 -3.28712 | opp_overlap 4832796 4832837, overlap 4832796 4832794 ACTGAAAAAGGCCGC CTGTTCCGGCCTCTTCTCGGG TAAA CCCGCGAAGAGGCCGGCCCCG TTATCCCACCACCGG TERM 3784 4833151 - 4833132 - g 79 -8.6 -4.25104 | CCCGGTCGACGAAAA GGTTCAGA ACGC CCTGAACC TCAAGCTCGAACGCA TERM 3785 4833872 - 4833838 - g 78 -14.3 -3.05384 | gap 1 CTTTTCGTCAGCCAA CGCCTGCGCCTGGCAC GCCT GCGCCAG-CGCAGCCG GCAAGAACTCGAACG Pput_4321 4832875 - 4834632 + | integral membrane sensor signal transduction histidine kinase Pput_4322 4834626 - 4835960 + | two component, sigma54 specific, Fis family transcriptional regulator Pput_4323 4836215 - 4837534 + | major facilitator superfamily metabolite/H(+) symporter TERM 3786 4837583 - 4837557 - f 100 -22.4 -4.30576 | opp_overlap 4837557 CTGGCAGTACTAAAA GGGGCGCTCCAT TGC ATGGAGCGCCCC TTTTTCATTCAGACC TERM 3787 4837557 - 4837583 + F 100 -22.4 -4.8622 | opp_overlap 4837557 CTGGCAGTACTAAAA GGGGCGCTCCAT TGC ATGGAGCGCCCC TTTTTCATTCAGACC TERM 3788 4837861 - 4837843 - g 72 -2.4 -4.7871 | AACGACCATGAAAAA CAAACTGA TCC TCACCTTG GCCCTCTCGGTTTTC Pput_4324 4837835 - 4838200 + | hypothetical protein TERM 3789 4838221 - 4838238 + F 83 -14.1 -3.32769 | overlap 4838214 GATTGCGAGCACCCA GCCCGGC TTCG GCCGGGC TTGATCATTTGCACA Pput_4325 4838320 - 4838925 + | hypothetical protein Pput_4326 4839159 - 4838926 - | hypothetical protein Pput_4327 4839502 - 4839209 - | antibiotic biosynthesis monooxygenase TERM 3790 4839585 - 4839642 + H 100 -28.8 -3.59979 | overlap 4839586 GCGCGTTAGGCCATT ACTGCATGTCAATTGCCTGATCCTGC AGCACG GCAGGATCAGGCAATCGACATGCAGC TTTCGACTAGCGCCC TERM 3791 4839586 - 4839641 + H 100 -32.3 -2.75844 | overlap 4839585 CGCGTTAGGCCATTA CTGCATGTCAATTGCCTGATCCTGC AGCACG GCAGGATCAGGCAATCGACATGCAG CTTTCGACTAGCGCC Pput_4328 4839705 - 4840625 + | AraC-like transcriptional regulator Pput_4329 4842386 - 4840749 - | hypothetical protein TERM 3792 4842210 - 4842183 - Gf 75 -11.3 -3.44146 | gap 1 GCCGGTGATAATGAA GCACACCC-CGG GTTTG CCGCGGGTGCGC GCATAGCCGTCAGCC Pput_4330 4842306 - 4842401 + | hypothetical protein Pput_4331 4842501 - 4843376 + | LysR family transcriptional regulator Pput_4332 4844010 - 4843396 - | NAD-dependent epimerase/dehydratase Pput_4333 4844194 - 4845102 + | LysR family transcriptional regulator Pput_4334 4846204 - 4845335 - | PEP phosphonomutase and related enzymes-like protein TERM 3793 4847294 - 4847314 + G 79 -8.1 -4.25104 | TGGCGCTGTTCGGCT GCGCCCTGC TGG GCCTGGCGC TTTTCATCGCACACG TERM 3794 4847774 - 4847735 - g 70 -8 -4.03234 | gap 2 TGGTGGGTACACAAA GTGC-GGTGGCCA-GC AAGGACATCG GCGTGGCCACCAGCAC CACCAACCTGTTCCG Pput_4335 4846585 - 4848036 + | EmrB/QacA family drug resistance transporter TERM 3795 4848047 - 4848092 + T 74 -11.2 -3.27994 | gap 2, opp_overlap 4848073, overlap 4848048 GCTGAAGGTTGCACA CG-CGCTGCCGCCTTGTGG-TG CGAA CAGCTGCAAGGCGGCGGCGACC TTAATCTCCCCTTAA TERM 3796 4848048 - 4848091 + T 78 -14.7 -2.56475 | gap 2, opp_overlap 4848073, overlap 4848047 CTGAAGGTTGCACAC G-CGCTGCCGCCTTGTGG-TG CGAA CAGCTGCAAGGCGGCGGCGAC CTTAATCTCCCCTTA Pput_4336 4848780 - 4848148 - | TetR family transcriptional regulator TERM 3797 4849143 - 4849113 - g 79 -9.6 -4.15222 | overlap 4849116 4849119 4849122 AGTGGCTGTAAGAAA GAAGAAGCAGCGCC AGC GGCGCAGGCTCCTC AGGTCGGCGTCGTGA TERM 3798 4849140 - 4849116 - g 72 -7.7 -4.20367 | overlap 4849113 4849119 4849122 GGCTGTAAGAAAGAA GAAGCAGCGCC AGC GGCGCAGGCTC CTCAGGTCGGCGTCG Pput_4337 4849038 - 4850192 + | RND family efflux transporter MFP subunit TERM 3799 4851232 - 4851201 - g 78 -14.6 -3.05384 | gap 1, opp_overlap 4851191 CCCGTGGTCACCGAA TCGATCAGCGGCGTG ATC CACACC-CTGATCGA AGCCGTGGTGCTGGT Pput_4338 4850196 - 4853348 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 3800 4853369 - 4853379 + G 73 -8.2 -4.07618 | TCTTTGTTGTCCCTG GCGG TAA CCGC TTTCATTCTTGGCGG TERM 3801 4853591 - 4853572 - g 85 -15 -3.61398 | CTCGCTGGTCAATAA CCGCGACC TGCG GGTCGCGG CGCTGAACCTCGATG TERM 3802 4854507 - 4854474 - g 82 -3.1 -5.2189 | gap 1, overlap 4854497 CCAAGTACGAAAAAA CCATC-CAGACGGCCT TCC AGGAAGTCTCCGATGG CCTGGCGGCACGCAA Pput_4339 4853345 - 4854799 + | RND efflux system outer membrane lipoprotein TERM 3803 4854814 - 4854843 + F 100 -18 -5.17353 | opp_overlap 4854819 ATCGGCCTTGTTACA GCAAAGCCCACC CTTAGC GGTGGGCTTTGC TTTTTTACTGCCTGT TERM 3804 4854838 - 4854819 - f 77 -10.7 -3.83026 | opp_overlap 4854814 CCTTGTTACAGCAAA GCCCACC CTTAGC GGTGGGC TTTGCTTTTTTACTG Pput_4340 4855202 - 4856458 + | outer membrane porin TERM 3805 4856498 - 4856465 - f 100 -18.9 -3.90112 | overlap 4856484 CTTCTGTGAATCAAA TGGCCTCTTCGCGGA TAAA CCCGCGAGGAGGCCA GACGCCTCCTCAAAT Pput_4341 4856702 - 4857226 + | hypothetical protein TERM 3806 4857277 - 4857228 - T 100 -17.9 -3.54543 | gap 1, opp_overlap 4857229 4857230, overlap 4857229 AGGCATCGGTGTAAA GGCCATTCGCGGGCAAGTGCCCTG TTG CAGGGGGCTTGCCCGCGAACG-CG GTTTAATGGCGCGAC TERM 3807 4857229 - 4857278 + T 100 -17.9 -3.72695 | gap 1, opp_overlap 4857228 4857229, overlap 4857230 GGCATCGGTGTAAAG GC-CATTCGCGGGCAAGTGCCCTG TTG CAGGGGGCTTGCCCGCGAACGCGG TTTAATGGCGCGACT TERM 3808 4857276 - 4857229 - T 100 -21.4 -2.72511 | gap 1, opp_overlap 4857229 4857230, overlap 4857228 GGCATCGGTGTAAAG GCCATTCGCGGGCAAGTGCCCTG TTG CAGGGGGCTTGCCCGCGAACG-C GGTTTAATGGCGCGA TERM 3809 4857230 - 4857277 + T 100 -21.4 -2.83403 | gap 1, opp_overlap 4857229 4857228, overlap 4857229 GCATCGGTGTAAAGG C-CATTCGCGGGCAAGTGCCCTG TTG CAGGGGGCTTGCCCGCGAACGCG GTTTAATGGCGCGAC Pput_4342 4857672 - 4857280 - | 4-carboxymuconolactone decarboxylase Pput_4343 4858474 - 4857683 - | 3-oxoadipate enol-lactonase Pput_4344 4859838 - 4858486 - | 3-carboxy-cis,cis-muconate cycloisomerase Pput_4345 4861137 - 4859848 - | major facilitator superfamily metabolite/H(+) symporter TERM 3810 4860705 - 4860676 - G 73 -8.5 -4.00348 | opp_overlap 4860679, overlap 4860679 CTGGAACGAAGCAAA GAAGCCGCGCTGC CCAC GCAGTGCCACTTC ACTCATGTAGGTGGC Pput_4346 4862527 - 4861325 - | beta-ketoadipyl CoA thiolase TERM 3811 4862823 - 4862790 - R 100 -22.5 -3.72576 | opp_overlap 4862803 TGCGCCCTGATCAAA GCACAACGCCGCACC TGTC GGCGCGGCGTTGCGC TGTGAATGGGCCGTA Pput_4347 4864200 - 4862854 - | benzoate transport TERM 3812 4864351 - 4864367 + r 81 -3 -5.30348 | GTGACAGTATTCATG CGTAAG TGCCT CTTATG TTTTTCTTGTTCGGT Pput_4348 4865396 - 4864521 - | beta-ketoadipate pathway transcription regulator TERM 3813 4865447 - 4865415 - H 95 -3.3 -5.79526 | overlap 4865417 4865418 ACACCTCAAAAAAAA CACCGGTTCGTGCGA TTA TCGAACAAACGGCCG ATAATCGCAATTGAC TERM 3814 4865444 - 4865417 - H 73 -5.6 -4.53853 | gap 1, overlap 4865415 4865418 ACCTCAAAAAAAACA CCGGTTCGTGCGA TTA TCGAACAAAC-GG CCGATAATCGCAATT TERM 3815 4865576 - 4865553 - H 100 -19.6 -3.06133 | opp_overlap 4865553 GAAGTCCCCAGGCAA CGGCCTCGCC TTTC GGCGAGGCCG TTTTTCATTACGGCC TERM 3816 4865553 - 4865576 + H 100 -19.6 -4.8622 | opp_overlap 4865553 GAAGTCCCCAGGCAA CGGCCTCGCC TTTC GGCGAGGCCG TTTTTCATTACGGCC Pput_4349 4865875 - 4866075 + | hypothetical protein Pput_4350 4866370 - 4867863 + | phosphate transporter TERM 3817 4867870 - 4867912 + T 83 -14.3 -3.35679 | gap 1, opp_overlap 4867884, overlap 4867884 ATTGGCTGAGTGACA CCGCAATGAATAAAGGCGCC CTCG GGCGCCTTT-TTCATAGCCG TTATGCCTGCCGAAG TERM 3818 4867884 - 4867899 + T 100 -11.8 -4.73388 | opp_overlap 4867884, overlap 4867870 ACCGCAATGAATAAA GGCGCC CTCG GGCGCC TTTTTCATAGCCGTT TERM 3819 4867899 - 4867884 - T 90 -11.8 -4.32951 | opp_overlap 4867884 4867870 ACCGCAATGAATAAA GGCGCC CTCG GGCGCC TTTTTCATAGCCGTT Pput_4351 4869444 - 4867969 - | protein of unknown function DUF853, NPT hydrolase putative TERM 3820 4869543 - 4869525 - H 70 -11.8 -2.53613 | opp_overlap 4869523, overlap 4869524 4869522 ATTAGAGAGGAACAG CCGAAAAG GGA CTTTTCGG GATGTTGCACAACCT Pput_4352 4869614 - 4871488 + | methyl-accepting chemotaxis sensory transducer Pput_4353 4871654 - 4872775 + | glycosyl transferase, group 1 TERM 3821 4873160 - 4873172 + G 74 -9.1 -3.85698 | CGAGAGCCAAGGTTG GCCTG TGG CAGGC TTTGTCGCACCGGCC Pput_4354 4872768 - 4873532 + | hypothetical protein TERM 3822 4873545 - 4873585 + G 76 -13.9 -3.19463 | overlap 4873546 TGAAGCGTTGGGCCT GGCTGGCGCTGGCACTGCT GGG GGCAGCGCTGGTGCCAGCG TTGCTGGGTGGTAGC TERM 3823 4873546 - 4873584 + G 83 -17.4 -2.51464 | overlap 4873545 GAAGCGTTGGGCCTG GCTGGCGCTGGCACTGCT GGG GGCAGCGCTGGTGCCAGC GTTGCTGGGTGGTAG TERM 3824 4873848 - 4873865 + G 95 -9.8 -4.62069 | GAGACCGCATCCGCC CGGCGC GCAGCG GCGCCG TTTTTGCCATGGACC Pput_4355 4873529 - 4874521 + | hypothetical protein purU 4875604 - 4874753 - | formyltetrahydrofolate deformylase Pput_4357 4875889 - 4876266 + | hypothetical protein TERM 3825 4876303 - 4876321 + GT 100 -16 -5.27335 | opp_overlap 4876303 TTCGCACAACAAAAA CGCCGGCA CAC TGCCGGCG TTTTTGTTTACCGGC TERM 3826 4876321 - 4876303 - gT 100 -16 -5.18726 | opp_overlap 4876303 TTCGCACAACAAAAA CGCCGGCA CAC TGCCGGCG TTTTTGTTTACCGGC Pput_4358 4876238 - 4876354 + | hypothetical protein sbcB 4877772 - 4876339 - | exonuclease I Pput_4360 4878189 - 4877830 - | type IV pilus assembly PilZ Pput_4361 4878699 - 4878313 - | hypothetical protein TERM 3827 4878346 - 4878378 + g 95 -10.5 -4.59109 | overlap 4878327 4878348 CGTCACCGGATTGGC CACGGCCGTTTCTGC GCC GCGCAAATGGCCGAG TTTTTCCAGCGTCTG Pput_4362 4878880 - 4880334 + | pyruvate kinase TERM 3828 4880408 - 4880431 + T 100 -18.2 -4.77036 | opp_overlap 4880408 CTGGAATAACAAAAA GCCCCGGTTC TCGC GAACCGGGGC TTTTTGATGGTGCAG TERM 3829 4880431 - 4880408 - T 100 -18.2 -5.29445 | opp_overlap 4880408 CTGGAATAACAAAAA GCCCCGGTTC TCGC GAACCGGGGC TTTTTGATGGTGCAG groEL 4882101 - 4880461 - | chaperonin GroEL TERM 3830 4881093 - 4881115 + g 84 -8.4 -4.4078 | overlap 4881096 TCTCGGTGTCAGCGC CAGCACCGTC GAT GATGGTGGTG TTTTCCTTGGACAGG groES 4882445 - 4882152 - | co-chaperonin GroES TERM 3831 4882476 - 4882496 + r 77 -8.2 -4.33274 | overlap 4882478 4882484 AATTGTGGTTTTCAT CGGCCGGT TCGAC ACCGGCGG TTTTGATGCTGTCCG TERM 3832 4882656 - 4882685 + r 95 -14.9 -3.8591 | opp_overlap 4882659, overlap 4882659 TCATCAGGCCAAAAA AAACCGGGGCCGC TTGC GCGGCCCCGGTCC TTCTTACTTGTCGCG TERM 3833 4882659 - 4882682 + r 100 -21 -3.00018 | opp_overlap 4882659, overlap 4882656 TCAGGCCAAAAAAAA CCGGGGCCGC TTGC GCGGCCCCGG TCCTTCTTACTTGTC TERM 3834 4882682 - 4882659 - R 100 -21 -5.78622 | opp_overlap 4882659 4882656 TCAGGCCAAAAAAAA CCGGGGCCGC TTGC GCGGCCCCGG TCCTTCTTACTTGTC fxsA 4883150 - 4882689 - | FxsA Pput_4366 4883947 - 4883216 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Pput_4367 4885040 - 4884030 - | hypothetical protein Pput_4368 4885205 - 4885558 + | methylated-DNA-(protein)-cysteine S-methyltransferase, DNA binding Pput_4369 4885602 - 4887149 + | AmpG-related permease TERM 3835 4887227 - 4887188 - T 70 -10.1 -3.53012 | gap 1 CTCTTCGCGGGTAAA CCCGCTCCTACACCGG GCCGCGTTG CCT-TGTAGGAGCGGG TTCACCCGCGAAGAG Pput_4370 4888551 - 4887310 - | major facilitator transporter TERM 3836 4888666 - 4888643 - R 71 -4.4 -4.57569 | gap 1, opp_overlap 4888643, overlap 4888645 TCAGGGTCGGAAAAA GCTGGGGCCGC TTT GCG-CCCCTTC GCGGGCAAGCCCGCT Pput_4371 4889604 - 4888762 - | MscS mechanosensitive ion channel Pput_4372 4890206 - 4889721 - | nucleotide-binding protein TERM 3837 4890255 - 4890228 - H 86 -7 -5.07652 | opp_overlap 4890228 4890225 TCTCCCAAAATAAAA GCGCGCTC AGGCTGAAGATG GAGCGCGC TGGGTTTGAAGGTTA TERM 3838 4891154 - 4891181 + G 71 -9 -3.72695 | overlap 4891155 GTCATGGCCTGCAAC TGCCGCAGCTGG AACA CCTGCTGCAGCG TTTGGTCGAAAACCT Pput_4373 4890307 - 4891224 + | 2-dehydropantoate 2-reductase Pput_4374 4891262 - 4893292 + | multi-sensor signal transduction histidine kinase Pput_4375 4893294 - 4893860 + | ATP--cobalamin adenosyltransferase Pput_4376 4894943 - 4893999 - | hypothetical protein Pput_4377 4895572 - 4894940 - | glutathione S-transferase domain-containing protein TERM 3839 4895631 - 4895604 - R 71 -7.6 -4.07568 | gap 1, opp_overlap 4895610 GTTTGTCTTGCAAAA CCCGCA-GGCCGC TGC GCGGCCTTTCGCG GGCAAGCCCGCTCCT TERM 3840 4895610 - 4895624 + r 79 -12.8 -3.53012 | opp_overlap 4895604 CTTGCAAAACCCGCA GGCCGC TGC GCGGCC TTTCGCGGGCAAGCC argJ 4896945 - 4895728 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 3841 4896539 - 4896566 + g 70 -9.9 -3.63744 | gap 1, overlap 4896538 TTCTCCGACAGGTTG TCGAGGGCG-GC CTGCA GCGCGCCTTCGA TCTTTTCGACCGGCA TERM 3842 4896910 - 4896899 - G 72 -7.2 -4.15006 | overlap 4896885 4896882 4896881 ATACCGAGTTCAAAA CCCG GAAC CGGG TGCAGGGTGGGCAAA TERM 3843 4896999 - 4896982 - R 83 -9.1 -4.60487 | gap 1, overlap 4896983 GATGATGTCGAAAAA GGGGCCGC TTC GCG-CCCC ATCGCGACACAAGGC TERM 3844 4897070 - 4897012 - R 100 -24 -3.49475 | gap 1, opp_overlap 4897013 4897013, overlap 4897013 CCCATCGCGACACAA GGCCGCTCCCACAAGGATCGCGCCCGT TCATGG ACGAGCGCGGTACCTGTGGGAGCGGC- CTTGTGTCGCGAAAG TERM 3845 4897013 - 4897070 + r 100 -28.5 -2.68823 | opp_overlap 4897012 4897013, overlap 4897013 CCATCGCGACACAAG GCCGCTCCCACAAGGATCGCGCCCGTT CATG GACGAGCGCGGTACCTGTGGGAGCGGC CTTGTGTCGCGAAAG TERM 3846 4897070 - 4897013 - R 100 -30 -2.69471 | opp_overlap 4897013 4897013, overlap 4897012 CCATCGCGACACAAG GCCGCTCCCACAAGGATCGCGCCCGT TCATGG ACGAGCGCGGTACCTGTGGGAGCGGC CTTGTGTCGCGAAAG TERM 3847 4897013 - 4897071 + r 100 -22.5 -3.48276 | gap 1, opp_overlap 4897012 4897013, overlap 4897013 CCATCGCGACACAAG -GCCGCTCCCACAAGGATCGCGCCCGTT CATG GACGAGCGCGGTACCTGTGGGAGCGGCC TTGTGTCGCGAAAGG TERM 3848 4897101 - 4897085 - R 88 -15.1 -3.53012 | opp_overlap 4897079 CCTTGTGTCGCGAAA GGGCCGC AAA GCGGCCC CAGGCTTGTACAACG secA 4899947 - 4897128 - | preprotein translocase subunit SecA Pput_4380 4900062 - 4900691 + | hypothetical protein TERM 3849 4900713 - 4900696 - T 100 -12.7 -5.31456 | opp_overlap 4900696 GCAAGCCATAAAAAA GGCCACC CGAA GGTGGCC TTAATGAACTAGAGA TERM 3850 4900696 - 4900713 + T 75 -12.7 -3.16564 | opp_overlap 4900696 GCAAGCCATAAAAAA GGCCACC CGAA GGTGGCC TTAATGAACTAGAGA lpxC 4901650 - 4900739 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3851 4901342 - 4901325 - G 75 -4.1 -4.71186 | gap 1, overlap 4901329 ATCAGGAATACAAAA GGACCGGC GCT GCC-ATCC ATGATCGGCACTTCC TERM 3852 4901733 - 4901683 - R 71 -11.3 -3.0806 | gap 1, opp_overlap 4901695, overlap 4901691 4901695 CGCAAATTGCGAACA GGTAT-CAACAAAGGCTGGGGATG ATAA CAGACCCAACCTTTGATGAATACC AATCACCTTTATACC TERM 3853 4901724 - 4901691 - R 70 -10.3 -3.2218 | opp_overlap 4901695, overlap 4901683 4901695 GCGAACAGGTATCAA CAAAGGCTGGGGATG ATAA CAGACCCAACCTTTG ATGAATACCAATCAC Pput_4382 4902959 - 4901763 - | cell division protein FtsZ Pput_4383 4904277 - 4903015 - | cell division protein FtsA Pput_4384 4905161 - 4904292 - | polypeptide-transport-associated domain-containing protein TERM 3854 4904572 - 4904562 - G 76 -8.2 -4.19817 | GCGAGCGATGGAAAA GCCC AAG GGGC GCAGCATCTGGCTCA ddl 4906123 - 4905167 - | D-alanine--D-alanine ligase TERM 3855 4906144 - 4906160 + r 74 -7.2 -4.26903 | CTTCTCCTGCTTGGC GCCTGC GAACA GCGGGC TTTTCATCAACTGCG murC 4907568 - 4906120 - | UDP-N-acetylmuramate--L-alanine ligase murG 4908640 - 4907561 - | N-acetylglucosaminyl transferase TERM 3856 4908106 - 4908088 - G 70 -11.6 -3.17527 | overlap 4908086 CACCGAGCACCAACA GGCGTGCG CGG CGCTCGCC CAAGGGCACGCGTTG Pput_4388 4909844 - 4908630 - | cell division protein FtsW murD 4911193 - 4909841 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3857 4911133 - 4911092 - G 75 -12.4 -3.60098 | ATCGGCGACCGCAAA GGCAATG-CCCCGGCTCGCC AGGA AGCGAACCAGGGACA-TGCC GCTCTTGCCGAGGCC mraY 4912276 - 4911194 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Pput_4391 4913643 - 4912276 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase murE 4915126 - 4913636 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Pput_4393 4916871 - 4915123 - | peptidoglycan glycosyltransferase TERM 3858 4916218 - 4916242 + g 86 -13.6 -3.82604 | opp_overlap 4916218 CAGGTCTATCGACAA CGCCAAGGTC TTCCC GGCCTTGGCG TTCTTGGTTACCTGA Pput_4394 4917161 - 4916868 - | cell division protein FtsL mraW 4918105 - 4917158 - | S-adenosyl-methyltransferase MraW TERM 3859 4917898 - 4917881 - G 90 -14.1 -4.1021 | opp_overlap 4917893 4917894 4917895 CTGCACAATGACAAA GCGGCCG TCTT CGGCCGC CAGCGCTTGCCCCGT Pput_4396 4918557 - 4918102 - | cell division protein MraZ TERM 3860 4919041 - 4919059 + r 75 -8.8 -4.14392 | overlap 4919037 TGTTGCCAGCCGTGC GGTGCGCT CTT ACCGCACC TTTTCACCCTTACCG TERM 3861 4919232 - 4919216 - R 81 -4.3 -5.06414 | GTTGCGGAACAAAAA CAGGCAG CGA CTGTCCG ATCGACTCTCCGCCG Pput_4398 4920184 - 4919309 - | uroporphyrin-III C/tetrapyrrole methyltransferase Pput_4399 4920371 - 4922188 + | LppC family lipoprotein TERM 3862 4922328 - 4922296 - g 81 -13.4 -3.65199 | opp_overlap 4922289 AACTGGCGATGCAAA GGCGGCGAGCTTGA TCTGG TCATGCTCGACGCC GATACAGTAGTATTC Pput_4400 4922188 - 4922559 + | hypothetical protein TERM 3863 4922787 - 4922825 + G 71 -5.9 -4.2558 | opp_overlap 4922774 4922782, overlap 4922790 GAGGGCAAGATGCTC G-CCTGCGGCAACGGCGGC TCG GCCGGCGATGCC-CAGCAC TTTTCATCGGAGCTG gmhA 4922646 - 4923239 + | phosphoheptose isomerase Pput_4402 4923236 - 4923814 + | transport-associated TERM 3864 4923847 - 4923866 + T 100 -13.6 -5.5604 | opp_overlap 4923847 CAGGCCAAACAAAAA GGCGATCC ATCT GGATCGCC TTTTTTGTTACTTGA TERM 3865 4923866 - 4923847 - T 100 -13.6 -5.28942 | opp_overlap 4923847 CAGGCCAAACAAAAA GGCGATCC ATCT GGATCGCC TTTTTTGTTACTTGA Pput_4403 4924305 - 4923874 - | ClpXP protease specificity-enhancing factor Pput_4404 4924939 - 4924316 - | glutathione S-transferase domain-containing protein TERM 3866 4925029 - 4924984 - R 100 -36.3 -4.564 | AACTTTAAATGAAAA CGCGCCCGGGGTGGCCTGGCA ATAC TGCTAGGCCACCCCGGGCGCG TTCAACAACCAGAAA Pput_4405 4925835 - 4925056 - | ubiquinol--cytochrome c reductase, cytochrome c1 TERM 3867 4925806 - 4925791 - G 74 -6.1 -4.43477 | overlap 4925792 GGCAGCGAAGGAAAA GGCAG GCATCA CTGCC AGCAAAAATACTGCA Pput_4406 4927049 - 4925835 - | cytochrome b/b6 domain-containing protein Pput_4407 4927639 - 4927046 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 3868 4927857 - 4927878 + r 100 -15.9 -5.0538 | opp_overlap 4927857 AAGGCTAAAAAAAAA GCCCGGTTC CAAG GAACCGGGC TTTTTTCGACTGCCG TERM 3869 4927878 - 4927857 - R 100 -15.9 -6.10489 | opp_overlap 4927857 AAGGCTAAAAAAAAA GCCCGGTTC CAAG GAACCGGGC TTTTTTCGACTGCCG rpsI 4928294 - 4927902 - | 30S ribosomal protein S9 rplM 4928737 - 4928309 - | 50S ribosomal protein L13 Pput_4410 4928996 - 4930036 + | aldo/keto reductase Pput_4411 4930143 - 4931147 + | helix-turn-helix domain-containing protein Pput_4412 4932348 - 4931254 - | AFG1 family ATPase TERM 3870 4932400 - 4932374 - R 100 -12.3 -5.4833 | gap 1, opp_overlap 4932373 CGAGGCAACAAAAAA CGGGCC-GTCAC TGTA GCGACAGGCCCG CTTAATGGCAATCAG Pput_4413 4933910 - 4932561 - | tryptophanyl-tRNA synthetase Pput_4414 4934570 - 4933935 - | alpha/beta fold family hydrolase-like protein Pput_4415 4934706 - 4935143 + | hypothetical protein TERM 3871 4935162 - 4935177 + T 100 -10.4 -5.27923 | opp_overlap 4935162 GCTGAACATGCAAAA GGCCTC GCAA GAGGCC TTTTTTATGGGCTTG TERM 3872 4935177 - 4935162 - T 86 -10.4 -4.28254 | opp_overlap 4935162 GCTGAACATGCAAAA GGCCTC GCAA GAGGCC TTTTTTATGGGCTTG Pput_4416 4936503 - 4935307 - | methionine gamma-lyase Pput_4417 4936631 - 4937110 + | AsnC family transcriptional regulator TERM 3873 4939289 - 4939270 - f 89 -5.8 -5.31275 | gap 1, opp_overlap 4939269 4939270 TCGGATGAGAAAAAA CGACTACTC ACC GA-TAGTCG ATTTCCCAGACAGCC Pput_4420 4939435 - 4939698 + | colicin immunity protein/pyocin immunity protein TERM 3874 4939708 - 4939727 + T 71 -7.8 -4.07885 | opp_overlap 4939708 AGCTAACACGAGCAA GGCCCTGA ACTC TGAGGGCC TTTTCACCCGAACTG TERM 3875 4939781 - 4939748 - T 78 -12.5 -3.22091 | opp_overlap 4939757, overlap 4939750 4939757 ACCCGAACTGAGCAA TAGAAAAAACCCCGC CGAA GCGGGGTTTTCCCTG CAGGCTAGCGCTTAG TERM 3876 4939779 - 4939750 - T 83 -15.1 -3.17319 | opp_overlap 4939757, overlap 4939748 4939757 CCGAACTGAGCAATA GAAAAAACCCCGC CGAA GCGGGGTTTTCCC TGCAGGCTAGCGCTT TERM 3877 4939757 - 4939772 + T 87 -11.8 -4.18197 | opp_overlap 4939757 4939750 4939748 GAGCAATAGAAAAAA CCCCGC CGAA GCGGGG TTTTCCCTGCAGGCT TERM 3878 4939772 - 4939757 - T 100 -11.8 -5.49569 | opp_overlap 4939757, overlap 4939750 4939748 GAGCAATAGAAAAAA CCCCGC CGAA GCGGGG TTTTCCCTGCAGGCT Pput_4421 4941694 - 4939793 - | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein Pput_4422 4942628 - 4941711 - | sulfate adenylyltransferase subunit 2 TERM 3879 4942261 - 4942285 + g 70 -12.1 -3.18849 | opp_overlap 4942253, overlap 4942260 4942262 TCGAAACCATGCTTG TCCAGCGCCTG CTT CAGGCCCTGGG TCTTCATGATGTCGG TERM 3880 4942262 - 4942284 + g 71 -13.4 -2.50988 | opp_overlap 4942253, overlap 4942261 4942260 CGAAACCATGCTTGT CCAGCGCCTG CTT CAGGCCCTGG GTCTTCATGATGTCG TERM 3881 4942760 - 4942776 + r 70 -11.5 -3.03124 | ATGACTGGGGGTTTG GGCTGGC AGG GCCGGCC TCTTCGCAGGTGAAC Pput_4423 4943610 - 4942852 - | hypothetical protein Pput_4424 4943779 - 4944939 + | 2-alkenal reductase Pput_4425 4945875 - 4945111 - | ABC transporter related TERM 3882 4945168 - 4945138 - G 76 -11 -3.71848 | CTGGCTGAGGAACAA CTTGGTCCGGTCGC TGC GCGGCCGGTCGAAG AAGTCATCCGGCGCG Pput_4426 4946983 - 4945886 - | polar amino acid ABC transporter, inner membrane subunit Pput_4427 4948172 - 4946994 - | polar amino acid ABC transporter, inner membrane subunit TERM 3883 4948231 - 4948203 - R 89 -17.4 -3.06492 | GTAGGGATTCGAACA GCCTGCGGCGGC GGGAT GCCGCCGCAGGA TGCAGCCATCAGCGC Pput_4428 4949268 - 4948240 - | extracellular solute-binding protein Pput_4429 4949601 - 4950257 + | carboxylesterase Pput_4430 4950358 - 4951800 + | ATP-dependent RNA helicase RhlB TERM 3884 4951898 - 4951914 + T 88 -15.1 -3.53012 | TGCGGAGATTGTCGG GGGCCGC TCC GCGGCCC TTTCGCGACACAAGG TERM 3885 4952208 - 4952224 + T 88 -15.1 -3.53012 | TGCGGAGATTGTCGG GGGCCGC CAC GCGGCCC TTTCGCGACACAGGG Pput_4431 4952819 - 4952373 - | molybdopterin biosynthesis MoaE protein Pput_4432 4953067 - 4952822 - | molybdopterin converting factor, subunit 1 moaC 4953654 - 4953067 - | molybdenum cofactor biosynthesis protein C TERM 3886 4953327 - 4953338 + g 90 -2.2 -5.40474 | GGTGGCACAACGGGA TCAG GTCG CTGG TTTTTTTCGCCGCCT TERM 3887 4953727 - 4953700 - R 75 -12.6 -3.14132 | opp_overlap 4953696, overlap 4953702 GGGCGTGTCCACGAA GAGGCCGGGCAG TAAT CTGCCCGGCTAC AGGGTTTACAAATGA TERM 3888 4953725 - 4953702 - R 78 -13.8 -3.13403 | opp_overlap 4953696, overlap 4953700 GCGTGTCCACGAAGA GGCCGGGCAG TAAT CTGCCCGGCT ACAGGGTTTACAAAT Pput_4434 4955127 - 4953733 - | PhoH family protein Pput_4435 4956536 - 4955409 - | polysaccharide deacetylase Pput_4436 4956674 - 4957453 + | hypothetical protein TERM 3889 4957512 - 4957475 - f 100 -19.3 -3.57144 | CCCTTCACGGCTAAA CCCGCTCTTACAGGTAA TGCG CTACCTGTAGGAGCGGG TTCACCCGCGAAGAG TERM 3890 4957724 - 4957759 + F 72 -9.8 -3.59262 | gap 1, opp_overlap 4957715 4957732 GCAACAGTTACGCCC TTGATA-CACGGGGGCG AAA CACCCGCGTGCTATCAA TTTGAAACTGTCCGC TERM 3891 4958076 - 4958053 - f 71 -11 -3.16246 | overlap 4958048 4958051 4958049 GAAAAAACAAGCACA GCAACGCGCC AAGT AGCGCATTGC AATAAAGACGGCTGC TERM 3892 4958813 - 4958778 - g 70 -12.6 -2.90496 | overlap 4958775 4958788 4958791 TCCTGCGTGAAAGCA CCGCCATCAAGGACTA CGAC CAGCCCCCGATGACGG TCATCGGCGAACTGG TERM 3893 4959283 - 4959229 - g 76 -12.9 -3.42574 | CGAAGCCCACGACAA GCGCAAGGTCGCC-CTGCTGGGCCTGA GCT TCAAGGCCGGCACCGACGACC-TGCGC GAAAGCCCGCTGGTG Pput_4437 4958291 - 4959607 + | GDP-mannose 6-dehydrogenase TERM 3894 4959614 - 4959665 + F 90 -15.1 -3.58533 | gap 1, opp_overlap 4959642 TGCTGGTAAGTGCCC GGCCGGGCAGCGATGAGGC-ACTC GACAA GAGCCGCCTCCTCGCTGCCCACCC TTTCCCGAATTCTCG Pput_4438 4959685 - 4961175 + | hypothetical protein TERM 3895 4962309 - 4962268 - g 74 -12.9 -3.25823 | gap 1 CCGCGTGCAGATCAA GCCAGAC-ACCGGCCTGCCC GCC GAACTGGCCGGCCGCCCGGC CTCGGTCAACAGCGA Pput_4439 4961213 - 4962379 + | type IV pilus assembly PilZ Pput_4440 4962390 - 4963823 + | Sel1 domain-containing protein TERM 3896 4963952 - 4963915 - g 100 -7.7 -5.41143 | gap 1, overlap 4963935 GACCGCTGAAAAAAA CTTCGGCCTGGACG-TGA AAA TCACCGGCCAGTCGGAAG ACGACCGTGACCTGG TERM 3897 4965124 - 4965098 - g 83 -7.9 -4.59773 | opp_overlap 4965118, overlap 4965115 4965118 GTCGATGGCGAAAAA GACCTCGGCCA GGAAA TGGACGTGGTC GTGACCAAGTACTTC Pput_4441 4963820 - 4965298 + | outer membrane protein AlgE TERM 3898 4965824 - 4965847 + G 84 -8.1 -4.4767 | gap 1 CAGGGTCAAACAGCT GCGCCTGTCC CAGGA GGGC-GGCGC TTTTCTGGTCAATGA TERM 3899 4966572 - 4966544 - g 76 -7.4 -4.25104 | CCGCCTGTACGAAAA CGTCG-CCATGGCC AAC GGCC-TGGTCGGCG TATACGGCCACATCA Pput_4442 4965321 - 4966880 + | carbohydrate-binding and sugar hydrolysis TERM 3900 4967082 - 4967064 - g 76 -7.4 -4.30576 | CCGCTATCAGCAAAA CTTCACCA CGC TGGTGCAG GCCCAGGGCGACTGG TERM 3901 4968161 - 4968148 - g 72 -4.5 -4.62872 | overlap 4968149 4968155 ATCAAGCTGGAAAAA CCGGA AACC TCCGA CACCGACGGCCGCTT Pput_4443 4966894 - 4968333 + | alginate biosynthesis protein AlgX TERM 3902 4968892 - 4968870 - g 78 -6.3 -4.66609 | gap 1, overlap 4968871 4968872 GACCTGATCGAAAAA TGGCTCAGCC GCCT GGCCGAGC-A GACTGTGCGTGACTG algL 4968342 - 4969445 + | poly(beta-D-mannuronate) lyase Pput_4445 4969644 - 4971101 + | membrane bound O-acyl transferase, MBOAT family protein TERM 3903 4971505 - 4971476 - g 70 -12.1 -3.15249 | GACACCCTGCAGCAA CACGGTAGCCAGC TGGT GCTGGCGATCGTG CCGGCCAAGGCACGG TERM 3904 4972139 - 4972114 - g 74 -5.4 -4.57569 | gap 1, opp_overlap 4972133, overlap 4972115 4972116 CGATGCCTTTAAAAA CGCCGCACCAC AAGTG GTGGTGTGG-G AATTCCCCGAACGTT Pput_4446 4971113 - 4972270 + | hypothetical protein Pput_4447 4972291 - 4972938 + | hypothetical protein Pput_4448 4972971 - 4974428 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 3905 4974468 - 4974430 - T 91 -14.5 -3.73224 | opp_overlap 4974431, overlap 4974431 CCATCGCGCAGTAAA TGCTGACTCGCCCCTGG GCTGA CCAGGGGCGAACCTGCT TATTCAACGCTTGGG TERM 3906 4974467 - 4974431 - T 88 -18 -2.8372 | opp_overlap 4974431, overlap 4974430 CATCGCGCAGTAAAT GCTGACTCGCCCCTGG GCTGA CCAGGGGCGAACCTGC TTATTCAACGCTTGG TERM 3907 4974431 - 4974467 + T 84 -13.6 -3.63569 | opp_overlap 4974431 4974430 CATCGCGCAGTAAAT GCTGACTCGCCCCTGG GCTGA CCAGGGGCGAACCTGC TTATTCAACGCTTGG Pput_4449 4974920 - 4974468 - | hypothetical protein TERM 3908 4974854 - 4974871 + g 100 -4.1 -5.77856 | gap 1 TGATGACAGCCGTAA CGT-TGCC CTT GGCAGGCG TTTTTTTAATTTCTT Pput_4450 4975090 - 4975554 + | hypothetical protein Pput_4451 4975676 - 4976488 + | short chain dehydrogenase Pput_4452 4978191 - 4976737 - | RND efflux system outer membrane lipoprotein Pput_4453 4979291 - 4978188 - | secretion protein HlyD family protein Pput_4454 4980819 - 4979278 - | major facilitator transporter TERM 3909 4980778 - 4980752 - G 71 -13.6 -2.53263 | overlap 4980725 4980724 TGCAGGCCGAACGCA GCCTGCGCGGGC GCA GCCGGCGCAGGG GCGGCGGCCATGGCG Pput_4455 4981860 - 4980955 - | LysR family transcriptional regulator TERM 3910 4981505 - 4981481 - G 73 -6.4 -4.36914 | gap 1, overlap 4981485 CCCTCCGGCACAAAA CGCA-GCACCG TATG CGGTGCCTGGG CCAGCATCATGCGCA Pput_4456 4981984 - 4982529 + | UspA domain-containing protein TERM 3911 4982541 - 4982594 + T 90 -18.2 -2.98823 | gap 1 CTGAGTTGCGCGAGG TGTCGCCAAGCGGATCGGGCAGCGC GCGGG GTGC-GCTCGATCGGCCTGGCGACG TATATCTCAAGGCGA Pput_4457 4983461 - 4982601 - | secretion protein HlyD family protein Pput_4458 4983672 - 4983472 - | hypothetical protein Pput_4459 4985839 - 4983662 - | fusaric acid resistance protein region TERM 3912 4984388 - 4984376 - G 76 -6.9 -4.49556 | GCGCGACGAAAGAAA CGCGC CCA GCACG AACACAGGCGCCAGC Pput_4460 4987365 - 4985836 - | RND efflux system outer membrane lipoprotein TERM 3913 4986707 - 4986686 - G 70 -10.1 -3.57144 | TGGCTGACTTCGAAA TGGGTGCCG ATAC CGGCATCCA GGCGACGCTTGGCCA Pput_4461 4987558 - 4988505 + | LysR family transcriptional regulator TERM 3914 4988622 - 4988603 - f 72 -12.8 -2.52464 | opp_overlap 4988602 4988603 CGTTCCTGCAAGGCA CCGCGCCC CTGT AGGCGCGG GTTTGCCCGCGAAGA TERM 3915 4988603 - 4988622 + F 70 -12.1 -2.71712 | opp_overlap 4988603, overlap 4988602 CGTTCCTGCAAGGCA CCGCGCC CCTGTA GGCGCGG GTTTGCCCGCGAAGA TERM 3916 4988699 - 4988687 - g 72 -2.6 -4.72272 | TTGCCCGATGAAAAA GACC GTCCT GGCC TTCAGCCGTATCACC TERM 3917 4989490 - 4989474 - g 78 -10.1 -3.96624 | opp_overlap 4989476 GACGTGTACGAGAAA GAGCCGC TGA GCGACTC GCCGCTGTTCAAGCT Pput_4462 4988679 - 4989653 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 3918 4989693 - 4989733 + T 75 -11.3 -3.53012 | gap 2, opp_overlap 4989693 CTCTTCGCGGGTAAA CCCGCTCCTACAAAGGGTG TGCAC TGCCCT--GTAGGAGCGGG TTTACCCGCGAAAGG TERM 3919 4989733 - 4989693 - T 82 -13.4 -3.53012 | gap 1, opp_overlap 4989693 CTCTTCGCGGGTAAA CCCGCTCCTACAAAG-GGT GTGC ACTGCCCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 3920 4989812 - 4989790 - T 74 -11.2 -3.27475 | overlap 4989788 TTGGCTACCACAACA CCCCCAGCCA CCC TGGCCCGGGG CTTGCGAAACACCAG Pput_4463 4990673 - 4989771 - | hypothetical protein Pput_4464 4990859 - 4991734 + | helix-turn-helix domain-containing protein TERM 3921 4991759 - 4991737 - T 81 -12.6 -3.59979 | opp_overlap 4991738 4991739, overlap 4991738 CTTTTTCATCTGAAA CCGGGGCCGC TCT GCGGCCCCAT TTGCCTAGAACTCGA TERM 3922 4991738 - 4991758 + T 84 -13.9 -3.65351 | opp_overlap 4991737 4991738, overlap 4991739 TTTTTCATCTGAAAC CGGGGCCGC TCT GCGGCCCCA TTTGCCTAGAACTCG TERM 3923 4991758 - 4991738 - T 82 -16.1 -2.75844 | opp_overlap 4991738 4991739, overlap 4991737 TTTTTCATCTGAAAC CGGGGCCGC TCT GCGGCCCCA TTTGCCTAGAACTCG TERM 3924 4991739 - 4991757 + T 87 -17.4 -2.78996 | opp_overlap 4991738 4991737, overlap 4991738 TTTTCATCTGAAACC GGGGCCGC TCT GCGGCCCC ATTTGCCTAGAACTC Pput_4465 4994154 - 4991764 - | TonB-dependent siderophore receptor Pput_4466 4995311 - 4994331 - | anti-FecI sigma factor, FecR TERM 3925 4995122 - 4995139 + g 100 -14.1 -4.36914 | overlap 4995119 CTTCGTCCGCCAGCC GCGCCGC TGGG GCGGCGC TTTTCTGCCACAGCA Pput_4467 4995892 - 4995308 - | ECF subfamily RNA polymerase sigma-24 factor Pput_4468 4996215 - 4995889 - | hypothetical protein Pput_4469 4997792 - 4996215 - | PepSY-associated TM helix domain-containing protein Pput_4470 4998094 - 4997789 - | hypothetical protein Pput_4471 4998351 - 4998698 + | hypothetical protein TERM 3926 4998708 - 4998738 + F 83 -15.5 -2.92475 | opp_overlap 4998713, overlap 4998713 GCCTGATCGGCAATG CAAAACGCCCGGC CTTGA GCCGGGCGTTTTC GTTTGTGCCGATCAA TERM 3927 4998713 - 4998733 + F 100 -15.4 -4.61873 | opp_overlap 4998713, overlap 4998708 ATCGGCAATGCAAAA CGCCCGGC CTTGA GCCGGGCG TTTTCGTTTGTGCCG TERM 3928 4998733 - 4998713 - f 100 -16.1 -4.27584 | opp_overlap 4998713 4998708 ATCGGCAATGCAAAA CGCCCGGCC TTG AGCCGGGCG TTTTCGTTTGTGCCG Pput_4472 4998820 - 4999110 + | hypothetical protein Pput_4473 4999584 - 4999114 - | phosphate-starvation-inducible E TERM 3929 4999737 - 4999727 - H 86 -6.8 -5.0538 | overlap 4999728 GCGCATTGCAAAAAA GCAC GCC GTGC TTGGGGAAAAATCAG Pput_4474 5000033 - 5000275 + | hypothetical protein Pput_4475 5000368 - 5000631 + | hypothetical protein Pput_4476 5000987 - 5001250 + | YebG family protein Pput_4477 5002328 - 5001309 - | Glu/Leu/Phe/Val dehydrogenase, dimerisation region TERM 3930 5003192 - 5003246 + G 73 -12.7 -3.19192 | opp_overlap 5003190 TGCTGACGGAAGACC CGGTCCAGCGCCTGAAGCTGTCCGA GCGAA TCGGCAAGCTTCCGGCGACGAACCG TTCACTTCACTGAGC Pput_4478 5002453 - 5003259 + | hypothetical protein Pput_4479 5003885 - 5003253 - | maleylacetoacetate isomerase Pput_4480 5005190 - 5003898 - | fumarylacetoacetase TERM 3931 5004817 - 5004802 - G 76 -9 -3.97636 | ATGCCAACGTAGAAA TCGGTG TAGT CACCGA TCTGCGCCGGCACGT Pput_4481 5006495 - 5005194 - | homogentisate 1,2-dioxygenase TERM 3932 5006082 - 5006120 + g 74 -5.3 -4.62069 | gap 1, opp_overlap 5006070 5006067 CACCCGTTCCATGGA CCGGTTGGCG-CAGTA GATGTAGA TGCTCACGCCAGCCGG TTTTTCCGCTGCGGC TERM 3933 5007325 - 5007370 + Gr 78 -12.6 -3.28712 | gap 1, opp_overlap 5007312, overlap 5007328 AACATGGGCCGGCGG CGCA-GCGCCTGCTCACGG CCGCACGAA CCGTGAGCTGGCGCATGGG TTATGCGGACAACCC TERM 3934 5007328 - 5007366 + Gr 73 -13.1 -2.59431 | opp_overlap 5007312, overlap 5007325 ATGGGCCGGCGGCGC AGCGCCTGCTCACGG CCGCACGAA CCGTGAGCTGGCGCA TGGGTTATGCGGACA Pput_4483 5010595 - 5007371 - | hypothetical protein Pput_4482 5006607 - 5007440 + | IclR family transcriptional regulator TERM 3935 5009097 - 5009073 - GT 83 -7.8 -4.55826 | gap 1, overlap 5009074 TCGAAAAGATGAAAA TCGCCTCCTGG TGCA CCAGG-GGCGT AGAGCAAGTACTGAT TERM 3936 5009096 - 5009074 - GT 74 -11.3 -3.32411 | gap 1, overlap 5009073 CGAAAAGATGAAAAT CGCCTCCTGG TGCA CCAGG-GGCG TAGAGCAAGTACTGA TERM 3937 5010849 - 5010871 + Tr 100 -17 -5.79526 | TCTGACGTCTCGATT GGCCGCTGCG GCT TGCAGCGGCC TTTTTTTTGAAATCT TERM 3938 5010980 - 5010922 - TR 100 -24.2 -3.04263 | gap 3 AGGTGACCGTCAAGA CTTTCAGCGCCGATGAGGTCGGGCGCCGT GCGG AGGGCGCCCGACCTCATCGGCGCTGA--- AACCTCGTCATGACC Pput_4484 5011893 - 5010988 - | alpha/beta hydrolase fold Pput_4485 5012741 - 5012070 - | LrgB family protein Pput_4486 5013132 - 5012746 - | LrgA family protein TERM 3939 5013976 - 5013965 - g 70 -7.2 -4.07568 | CGGGTGGTGGCAAAA GCGC TGGA GCGC CCCGGGGTGGTGCGT Pput_4487 5013230 - 5014111 + | LysR family transcriptional regulator Pput_4488 5014588 - 5014133 - | flavodoxin Pput_4489 5014704 - 5015132 + | putative PAS/PAC sensor protein Pput_4490 5015192 - 5015809 + | hypothetical protein Pput_4491 5016729 - 5015794 - | MerR family transcriptional regulator TERM 3940 5016931 - 5016909 - H 77 -10.5 -3.74077 | GGCCACACAGCCAAA GGGGCCAGC TACCC GCCAGCCCC GTTGCCAGGAGATAC Pput_4492 5016950 - 5017510 + | hypothetical protein Pput_4493 5017544 - 5018281 + | short chain dehydrogenase Pput_4494 5018291 - 5018584 + | hypothetical protein Pput_4495 5018581 - 5018922 + | HopJ type III effector protein Pput_4496 5019875 - 5018967 - | alpha/beta hydrolase-like protein Pput_4497 5021230 - 5020019 - | trans-2-enoyl-CoA reductase TERM 3941 5021667 - 5021653 - g 91 -9.2 -4.42464 | AACTGCTGAAACAAA CCGGGC TGG ACCCGG CGCAGGTCGACGAAG TERM 3942 5022281 - 5022303 + G 83 -9 -4.25104 | opp_overlap 5022248 5022245 5022287, overlap 5022287 CAATGCCTCCAGCCT GAACGACGGC GCC GCCGCCGTGC TTTTGATGAGCGCAG TERM 3943 5022662 - 5022651 - g 78 -3.6 -5.0538 | CGGGATGCCAAAAAA GGCC TGGC GACC TTGTGCATTGGTGGT Pput_4498 5021532 - 5022710 + | acetyl-CoA acetyltransferase Pput_4499 5023673 - 5022849 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase Pput_4500 5023903 - 5025390 + | methylenetetrahydrofolate reductase Pput_4501 5026327 - 5025350 - | cobalamin synthesis protein, P47K TERM 3944 5026388 - 5026352 - R 71 -7.2 -4.19238 | gap 1, opp_overlap 5026354 5026355, overlap 5026355 TCCTGAATCTGAAAA TGACTGTGGGAGCC-GG TTAC CCAGGCTCCCACAGATT TACACGTACCGCAGG TERM 3945 5026354 - 5026386 + r 86 -14.2 -3.57144 | gap 1, opp_overlap 5026352 5026355, overlap 5026355 CTGAATCTGAAAATG ACTGTGGGAGCC-GG TTAC CCAGGCTCCCACAGA TTTACACGTACCGCA TERM 3946 5026355 - 5026385 + r 87 -17.7 -2.74144 | gap 1, opp_overlap 5026352 5026355, overlap 5026354 TGAATCTGAAAATGA CTGTGGGAGCC-GG TTAC CCAGGCTCCCACAG ATTTACACGTACCGC TERM 3947 5026385 - 5026355 - R 89 -17.7 -3.11289 | gap 1, opp_overlap 5026355 5026354, overlap 5026352 TGAATCTGAAAATGA CTGTGGGAGCC-GG TTAC CCAGGCTCCCACAG ATTTACACGTACCGC Pput_4502 5026602 - 5026405 - | hypothetical protein Pput_4503 5028686 - 5026620 - | carbon starvation protein CstA Pput_4504 5028863 - 5029225 + | type IV pilus assembly PilZ Pput_4505 5029489 - 5031006 + | uracil-xanthine permease TERM 3948 5031009 - 5031042 + T 82 -15.3 -3.02511 | opp_overlap 5031003 TGCCGAACACTGACT GATTGCAGGAGCGAG CTTG CTCGCTCCTGCACAC TATTCGAACAATGCA Pput_4506 5032412 - 5031042 - | DNA repair protein RadA TERM 3949 5031815 - 5031779 - G 82 -5.7 -4.91109 | opp_overlap 5031789 5031806 5031810 GGCCGACCAGAAAAA TTGCCGTACCGCTTTGC TTG GCATAGCGCACCAGCAA CGCTGTGCTTTCGCG TERM 3950 5032261 - 5032294 + g 71 -9.6 -3.70438 | TGTCCTGTCCAGCCA GC-GCGGCCGCTACTG GGTG CAGCAGCG-CCGCCGC TTTCGATCATGGTTT mscL 5032589 - 5033008 + | large-conductance mechanosensitive channel Pput_4508 5034139 - 5033285 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 3951 5034203 - 5034193 - H 100 -3.2 -5.88565 | overlap 5034194 5034202 GCTATAACAAAAAAA TCCC AAC AGGA TGGTAGGTCTTTTCC Pput_4509 5034277 - 5034984 + | autoinducer-binding domain-containing protein TERM 3952 5035056 - 5035034 - f 79 -12.6 -3.53761 | opp_overlap 5035033 5035032, overlap 5035023 5035022 GAATCGCCCGGCAAA GCCCGGCGCG AAC CGCAACGGGC AGTTTCGTACCCGAG Pput_4510 5035081 - 5036205 + | rRNA (guanine-N(2)-)-methyltransferase Pput_4511 5036466 - 5036311 - | hypothetical protein TERM 3953 5036416 - 5036430 + g 81 -7.8 -4.46073 | opp_overlap 5036404 5036415, overlap 5036417 CAACAGCCAACCCAG TCGCTG CCA CAGCGG TTTCTTGTCTTCCAA Pput_4512 5037483 - 5036476 - | cytochrome d ubiquinol oxidase, subunit II Pput_4513 5038923 - 5037487 - | cytochrome bd ubiquinol oxidase, subunit I TERM 3954 5039715 - 5039756 + G 81 -10.2 -4.15664 | gap 3, overlap 5039712 GCGGCGTCGGCCTCG GCCACCCA--GTCGGCGACCA TCG TGG-CGCCGGCGGTGGGCGGC TTTCTGTATGCCTTT TERM 3955 5039867 - 5039905 + G 76 -10.3 -3.90112 | gap 2 CCAGGTCGCCCAGCG CGGACG-C-GCCAGCATCG AAT CGCTGCTGGCTGGCATCCG TTTCATTCGCAGCCG Pput_4514 5039268 - 5040488 + | major facilitator transporter TERM 3956 5040499 - 5040482 - f 74 -11.3 -3.29144 | GGATCGGTTGCATAA CGGGTGA TGCA TCACCCG TGCCGGCCTGTTCGC TERM 3957 5040591 - 5040617 + F 88 -7.2 -5.1675 | CGGCCATAGGCCCCC GCCATGCATGCT GGT ATCATGCGCGGC TTTTTTCCTCCCTAC Pput_4515 5040688 - 5042013 + | xanthine/uracil/vitamin C permease Pput_4516 5042010 - 5043095 + | tRNA (uracil-5-)-methyltransferase Pput_4517 5043888 - 5043283 - | protocatechuate 3,4-dioxygenase, alpha subunit Pput_4518 5044618 - 5043899 - | protocatechuate 3,4-dioxygenase, beta subunit Pput_4519 5044818 - 5045708 + | protein of unknown function, zinc metallopeptidase putative TERM 3958 5046270 - 5046282 + G 70 -10.5 -3.64822 | opp_overlap 5046247 5046245 GGCTACGACGCCACC CGCGC AGC GCGCG TTTCCATGGACAGCT TERM 3959 5046612 - 5046572 - g 86 -11.9 -4.14472 | gap 1, overlap 5046550 GCAACAGTTCGAAAA CGCGGTACTGGCCTATCG TGACGC CG-TACGCCAGTTCCGCG ACGCGGTTGCCAACA TERM 3960 5046868 - 5046856 - g 100 -9.1 -5.00616 | TGGCCGTGGAAAAAA TCGCC AGT GGCGA CCTTACCCAGCACAT Pput_4520 5045880 - 5047799 + | methyl-accepting chemotaxis sensory transducer TERM 3961 5047813 - 5047829 + T 88 -15.1 -3.53012 | GACCTTTGGAACCTG GGGCCGC TTT GCGGCCC TTTCGCGACACAAGG Pput_4521 5049588 - 5047921 - | gamma-glutamyltransferase Pput_4522 5050602 - 5049706 - | LysR family transcriptional regulator Pput_4523 5051376 - 5050786 - | NAD(P)H dehydrogenase (quinone) Pput_4524 5051540 - 5051854 + | antibiotic biosynthesis monooxygenase Pput_4525 5052608 - 5051844 - | hypothetical protein TERM 3962 5053337 - 5053309 - g 78 -14.5 -3.04144 | overlap 5053313 GTTGTACCTGGAAGA GCAAGCGCTGCAC GAG GGGCAGCGCATGC AGGTTCGGGTACGAG TERM 3963 5053333 - 5053313 - g 74 -12.5 -3.36749 | overlap 5053309 TACCTGGAAGAGCAA GCGCTGCAC GAG GGGCAGCGC ATGCAGGTTCGGGTA Pput_4526 5052686 - 5053567 + | LysR family transcriptional regulator Pput_4527 5053949 - 5053674 - | hypothetical protein Pput_4528 5054020 - 5054958 + | cation diffusion facilitator family transporter TERM 3964 5055319 - 5055304 - g 74 -9 -3.85389 | opp_overlap 5055303 5055299 5055306 GGCGAAGAACCGAAA CACCTG AAAG CAGGTG ATGTGTTCGTGATCG Pput_4529 5055055 - 5055399 + | protein of unknown function DUF861, cupin_3 TERM 3965 5055570 - 5055512 - T 77 -9.7 -3.90707 | gap 2, opp_overlap 5055516, overlap 5055513 GTGGACGAAAAAAAT CGCGGAGCAGGCGCCCTTCCCTCTG GTGCGCAGTTA CAGAGGGAAGGCCACCTGG-CC-CG CGATGAAGTCCACCT TERM 3966 5055571 - 5055513 - T 100 -20.4 -2.93701 | opp_overlap 5055516, overlap 5055512 TGGACGAAAAAAATC GCGGAGCAGGCGCCCTTCCCTCTG GTGCGCAGTTA CAGAGGGAAGGCCACCTGGCCCGC GATGAAGTCCACCTC Pput_4530 5056479 - 5055592 - | 3-hydroxyisobutyrate dehydrogenase Pput_4531 5058016 - 5056490 - | methylmalonate-semialdehyde dehydrogenase TERM 3967 5058468 - 5058490 + G 72 -2.7 -4.72272 | gap 1 GCCATGTGCGCATGG GCTGCACGGA GGGC TTTG-GCAGC TTTTTCATCACGCCG Pput_4532 5058149 - 5059099 + | LysR family transcriptional regulator Pput_4533 5059722 - 5059234 - | OmpA/MotB domain-containing protein Pput_4534 5061001 - 5059730 - | diguanylate cyclase Pput_4535 5061564 - 5060998 - | hypothetical protein Pput_4536 5063740 - 5061665 - | exodeoxyribonuclease V, alpha subunit TERM 3968 5063312 - 5063281 - G 75 -12.3 -3.65199 | gap 1 AACGGCGCAGGTAAA GGCGCTCGCCACTG CGTAC CAGTGGCC-GCGCC TGCTGGCCAGGCGTA Pput_4537 5067411 - 5063737 - | exodeoxyribonuclease V, beta subunit TERM 3969 5065750 - 5065800 + g 73 -12.6 -3.15544 | gap 1, opp_overlap 5065736 5065737 5065769, overlap 5065795 5065796 ACCCGCCGTGCCCTG CTGGCCGCCA-TTGAGCAAGGCG ACAATA TGGCTGGCGCAACTGGCGGCCAG TTGCTGGCGGTAAAC Pput_4538 5070890 - 5067408 - | exodeoxyribonuclease V, gamma subunit TERM 3970 5071215 - 5071177 - R 100 -17.7 -3.85698 | gap 1, opp_overlap 5071184, overlap 5071179 5071184 TTTTTTGCCCACAAA GACAAAACCCCTACCTGC ATGT GCAGATAGGGGTTTTG-C GAAATGAATCTTGAC TERM 3971 5071214 - 5071179 - R 100 -21.4 -3.51934 | opp_overlap 5071184, overlap 5071177 5071184 TTTTGCCCACAAAGA CAAAACCCCTACCTGC ATGT GCAGATAGGGGTTTTG CGAAATGAATCTTGA TERM 3972 5071184 - 5071209 + r 95 -13.3 -4.09864 | opp_overlap 5071179 5071177 5071184 CCCACAAAGACAAAA CCCCTACCTGC ATGT GCAGATAGGGG TTTTGCGAAATGAAT TERM 3973 5071209 - 5071184 - R 100 -15.5 -4.84918 | opp_overlap 5071184, overlap 5071179 5071177 CCCACAAAGACAAAA CCCCTACCTGC ATGT GCAGATAGGGG TTTTGCGAAATGAAT TERM 3974 5074576 - 5074538 - R 79 -8.4 -4.41206 | opp_overlap 5074542 5074546 5074550, overlap 5074528 5074539 AACGATCTGACAAAA GTCAGAAATCAACATTCA ATA TGAATGTTCATTTCTAAG TTCTGACAAGTTACT TERM 3975 5074575 - 5074539 - R 77 -11.9 -3.24 | opp_overlap 5074542 5074546 5074550, overlap 5074528 5074538 ACGATCTGACAAAAG TCAGAAATCAACATTCA ATA TGAATGTTCATTTCTAA GTTCTGACAAGTTAC TERM 3976 5076442 - 5076494 + r 75 -13 -3.02902 | gap 1, opp_overlap 5076449 5076456, overlap 5076439 5076455 AACCCTAAACTTGGC TCAGCAATCTCAAATGACTATGTGA TTTC TCGCATGGTCACTTGTGA-TGCTGA TAATCTTTTTGACTA TERM 3977 5076807 - 5076825 + r 82 -6 -4.87291 | opp_overlap 5076807 GCCTTCACTACTTAA CTCATTGA ATC TCAAGGAG TTTTTCGTTCCGATG TERM 3978 5077016 - 5076958 - R 88 -18.4 -2.78384 | gap 3, opp_overlap 5076960 GTGTTTGCCACGACA GTTTCAGCGCCTGTGAGACCGAGCGCCGC CCGC GCGGCGCTCGGTCTCATAGGCGGTGA--- ATGTCTCAAGCCGGA TERM 3979 5076960 - 5077017 + r 100 -39.5 -2.87132 | opp_overlap 5076958 GTTTGCCACGACAGT TTCAGCGCCTGTGAGACCGAGCGCCGC CCGC GCGGCGCTCGGTCTCATAGGCGGTGAA TGTCTCAAGCCGGAC Pput_4539 5077747 - 5077136 - | putative sulfite oxidase subunit YedZ TERM 3980 5077429 - 5077394 - G 83 -15.4 -3.19157 | overlap 5077385 5077418 CAGCAACCCCAGGAA CCCCAGCGCCCCCACA ATAA TGTAGGGGCGCTTGCG CAACTCCACCGCCAA Pput_4540 5078760 - 5077747 - | putative sulfite oxidase subunit YedY Pput_4541 5079691 - 5078840 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 3981 5079826 - 5079798 - R 73 -12.6 -2.59564 | gap 1, opp_overlap 5079799 5079805, overlap 5079742 5079805 GCTGGATGCCAGAAC GAAAAAACGCGGC CGAA GCCGCGTTTTT-C ATCTTTCGATAAGAC TERM 3982 5079799 - 5079826 + r 73 -12.8 -2.64144 | opp_overlap 5079742 5079798 5079805, overlap 5079805 CTGGATGCCAGAACG AAAAAACGCGGC CGAA GCCGCGTTTTTC ATCTTTCGATAAGAC TERM 3983 5079820 - 5079805 - R 100 -11.8 -5.32944 | opp_overlap 5079799 5079805, overlap 5079798 GCCAGAACGAAAAAA CGCGGC CGAA GCCGCG TTTTTCATCTTTCGA TERM 3984 5079805 - 5079820 + r 100 -11.8 -4.93696 | opp_overlap 5079805 5079798, overlap 5079799 GCCAGAACGAAAAAA CGCGGC CGAA GCCGCG TTTTTCATCTTTCGA Pput_4542 5080858 - 5079842 - | ketol-acid reductoisomerase ilvH 5081406 - 5080915 - | acetolactate synthase 3 regulatory subunit Pput_4544 5083132 - 5081408 - | acetolactate synthase 3 catalytic subunit TERM 3985 5082166 - 5082188 + g 72 -12 -3.27923 | GCACGCTGTCGACCG GGCCGACG ATTGGCA CGTCGGCC TTGATCATCTTCGAG TERM 3986 5083519 - 5083501 - R 100 -12.4 -5.76949 | GATTTCCAAAAAAAA GGGCCACA ATC TGCGGCCC TTGACGGAAAAACTG Pput_4545 5083873 - 5083541 - | hypothetical protein Pput_4546 5084673 - 5083873 - | hypothetical protein Pput_4547 5087010 - 5084689 - | penicillin-binding protein 1B TERM 3987 5088283 - 5088260 - g 70 -10.2 -3.61398 | CTGTTCGGCGAACAA CAGCAGGCCG ACGC CGGCCAACTG AGCACAGGCATCTAT Pput_4548 5087087 - 5088688 + | hypothetical protein Pput_4549 5088846 - 5089124 + | TfoX domain-containing protein TERM 3988 5089259 - 5089279 + T 100 -16.9 -5.50499 | opp_overlap 5089251 CTAATCACGGTTATT GACCCGGCA ATT TGCCGGGTC TTTTTTTGCCTGTGC Pput_4550 5090189 - 5089305 - | hypothetical protein Pput_4551 5091061 - 5090294 - | hemin importer ATP-binding subunit Pput_4552 5092098 - 5091061 - | transport system permease protein Pput_4553 5092979 - 5092095 - | periplasmic binding protein TERM 3989 5092228 - 5092251 + g 77 -4.4 -4.86731 | gap 1, overlap 5092229 CGTTTCTCACGCACG GCCCGCG-AGG CAG CCAGCGCGGGG TTTTCTTTCAACAGC Pput_4554 5093128 - 5093445 + | Rieske (2Fe-2S) domain-containing protein Pput_4555 5094148 - 5093435 - | sugar fermentation stimulation protein A Pput_4556 5095320 - 5094148 - | hypothetical protein TERM 3990 5095107 - 5095082 - G 80 -5.4 -4.82901 | gap 1 CGCTGCCCATAAAAA CCGGCAATTGC CTCAC GCAGT-GCCGG CAGACCGCGTGCGGC Pput_4557 5095531 - 5095977 + | TraR/DksA family transcriptional regulator TERM 3991 5095987 - 5095953 - f 70 -2.9 -4.84017 | gap 1, opp_overlap 5095962 AATTGCCGAGAAAAA GGAAAAAACGGTCGGC AAAG GCTGATC-TTTCTTCC ACCTGAACGGGGCGC TERM 3992 5095995 - 5096015 + F 100 -18.3 -4.18042 | TTTCTTCCACCTGAA CGGGGCGCA TCA TGCGCCCCG TTTCATTTATATGCC Pput_4558 5096026 - 5096928 + | glutamyl-Q tRNA(Asp) synthetase Pput_4559 5097173 - 5097349 + | hypothetical protein TERM 3993 5097785 - 5097809 + G 70 -7.8 -4.10161 | CCTTACCGGTGAACC GGTCAAGGCC CGGGT GGCCTTTGCC TTTTGCACGCTGATC TERM 3994 5099450 - 5099436 - g 79 -11.4 -3.88291 | overlap 5099438 5099439 GAGCACCTGCACAAA CAGCGC CTG GCGCTG GACGGCCAGCCACGC TERM 3995 5099695 - 5099675 - g 73 -8.2 -4.07568 | CTGCCTGGCGCAAAA CCTGCGCG AGGAA CGCGAAGG CGATGGTGAAATCAT Pput_4560 5097333 - 5100308 + | multi-sensor signal transduction histidine kinase TERM 3996 5101023 - 5100991 - g 100 -9.9 -4.72272 | gap 3, opp_overlap 5101006 5101015 5101017 TTCGGCCACGAAAAA GGCGCGTTCACCGGCG CCAG CGCCGG-G--CGCGCC GGCTTGGTGGAGGCC TERM 3997 5101225 - 5101206 - g 76 -5.6 -4.62069 | opp_overlap 5101207, overlap 5101207 CCGCGACCTGAAAAA CCTGGCCA AGGC CGGCCAGT TCCGTGAAGACTTGT Pput_4561 5100313 - 5101755 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 3998 5102400 - 5102386 - f 84 -2.8 -5.35721 | overlap 5102388 AGAGAACAACAAAAA CTGC ACTAAAA GCAG CGCCTGAACTGGTTG TERM 3999 5102573 - 5102590 + F 81 -12.7 -3.64915 | opp_overlap 5102567, overlap 5102567 ACGCAACGACTTCTT GGGGAGC TTAG GCTCCCC TTGTCGTTTCTACCC TERM 4000 5103641 - 5103608 - g 74 -10.3 -3.68569 | gap 1, opp_overlap 5103635, overlap 5103629 CCAGGCACTGAACAA CACCGACCTGCGCGTG AAG CAGG-GCAAGCCGGTG ACGCCAGCCTTCCTG Pput_4562 5102724 - 5104106 + | poly(A) polymerase Pput_4563 5104103 - 5104582 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 4001 5104566 - 5104598 + F 81 -15.6 -2.52896 | AATGCCCATTCGTCG GCCTGGAACGCCTG TAGAC CGGGCGTTCCAGCC TGCATTACCACCTCG panB 5104845 - 5105645 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 5105642 - 5106505 + | pantoate--beta-alanine ligase TERM 4002 5106542 - 5106575 + F 90 -16.7 -3.35813 | CCCATTCGCGGGCAA GCCCGCTCCTGCACG TTTA CCTGTAGGGGCGGGC TTGCTTGCAATGCCC TERM 4003 5106691 - 5106643 - f 78 -13.1 -3.28712 | GGCCTTTGCCTATAA TGGTGCCAGCCTGAACCCGGCAA CGA CTGCCGTGTCCAAGCCCTCACCA CGCACCAAGGGAACC TERM 4004 5107416 - 5107379 - g 74 -4.7 -4.61231 | gap 1 CGAGACGCTGAAAAA CGCCATGGCCGCGCGTAC CTG GTACCTG-GCCCAAGGCG GCTCGGAAGCCGAGC pgi 5106714 - 5108378 + | glucose-6-phosphate isomerase TERM 4005 5108412 - 5108451 + F 90 -15.8 -3.53012 | opp_overlap 5108412 CTCTTCGCGGGTAAA CCCGCTCCTACCAGGCAA CGCG TTATCTCGTAGGAGCGGG TTTACCCGCGAAGAG TERM 4006 5108451 - 5108412 - f 90 -15.8 -3.53012 | opp_overlap 5108412 CTCTTCGCGGGTAAA CCCGCTCCTACCAGGCAA CGCG TTATCTCGTAGGAGCGGG TTTACCCGCGAAGAG TERM 4007 5109751 - 5109771 + G 74 -12.6 -3.37056 | GGTATTTCGAGGAGG TCGGGCAG AAGCG CTGCCCGA TTGTGGATACCTGGT Pput_4567 5108559 - 5110493 + | acetyl-CoA synthetase Pput_4568 5110535 - 5111404 + | hypothetical protein TERM 4008 5112526 - 5112511 - g 81 -7.5 -4.41494 | overlap 5112512 CACGCCGAAGGAAAA GGCCG AGCCGG CGGCC GCAGCACCTACGCCT TERM 4009 5113651 - 5113628 - g 71 -8.1 -3.86015 | CAGCTGGGCGAGAAA GTCGACAGC CCGGAT GCGGTCGAC CTTCCGATCCGCCTG Pput_4569 5111483 - 5114419 + | hypothetical protein Pput_4570 5114935 - 5114522 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4010 5114936 - 5114948 + H 74 -3.3 -4.98522 | AGGCAATTCGGACAT TGGCG AAG CTCCA TTTTTGTATACAATT Pput_4571 5114996 - 5115298 + | antibiotic biosynthesis monooxygenase TERM 4011 5115330 - 5115311 - T 100 -15 -5.13741 | opp_overlap 5115311 TGAACTCAAGAAAAA GCCCTGGC ACGG GCCAGGGC TTTGCTGAAAGTGGC TERM 4012 5115311 - 5115330 + T 95 -15 -3.73775 | opp_overlap 5115311 TGAACTCAAGAAAAA GCCCTGGC ACGG GCCAGGGC TTTGCTGAAAGTGGC Pput_4572 5115725 - 5115375 - | transport-associated TERM 4013 5115963 - 5115948 - R 100 -11.8 -5.14563 | opp_overlap 5115948 GCCCCCATGAAAAAA GGGCCC CGAA GGGCCC TTTCTCTATTGCGTG TERM 4014 5115948 - 5115963 + r 90 -11.8 -4.21811 | opp_overlap 5115948 GCCCCCATGAAAAAA GGGCCC CGAA GGGCCC TTTCTCTATTGCGTG Pput_4573 5118092 - 5115987 - | polynucleotide phosphorylase/polyadenylase rpsO 5118612 - 5118343 - | 30S ribosomal protein S15 TERM 4015 5118447 - 5118468 + g 73 -8.7 -4.06562 | opp_overlap 5118449 TGACCATACGGATCA GACCACGAC GGGA GTGGTGGTC TTTATCGTTGGCCTT TERM 4016 5118722 - 5118753 + r 80 -11.4 -3.71527 | CAGCCACCCTTGATG CCGTGGGGCTCGGC AACT GCCTGACCCCGCGG TTTCGGTCATTCCGA TERM 4017 5118780 - 5118801 + r 74 -12.3 -3.06796 | gap 1, opp_overlap 5118777 5118774, overlap 5118782 CCGACCGAATCAGCC GACGCGGCGC AAT GCGCC-CGTC TTCGCTCACCTCACC Pput_4575 5119677 - 5118760 - | tRNA pseudouridine synthase B rbfA 5120079 - 5119681 - | ribosome-binding factor A TERM 4018 5120138 - 5120109 - R 100 -17.1 -3.64236 | overlap 5120101 ACTTAAAGCGGCAAA CGCCCGGACAGAC GAAT GCCTGACCGGGCG CTACCTGAAGAGGTA infB 5122736 - 5120196 - | translation initiation factor IF-2 TERM 4019 5122315 - 5122343 + g 72 -12.4 -3.35813 | gap 1 GGGGCGGCGGCGGTG GAGCCGGC-CGCC TGAC GGCGAGCCTGCTC TTCGTTGCGCTGGCG nusA 5124245 - 5122764 - | transcription elongation factor NusA TERM 4020 5123771 - 5123808 + g 83 -4.7 -5.0538 | opp_overlap 5123760, overlap 5123765 5123772 GCAAGGCCTCGGCGT TGTTGCCCAGGTCAACG ATGA CGTTGTCGCGGGTAACC TTTTTTACGGTACCG TERM 4021 5124187 - 5124197 + g 74 -2.4 -4.88407 | TCGAAAATGACGCCG GGCG GTA CACC TTTTTCGTTGGATAC Pput_4579 5124814 - 5124305 - | hypothetical protein TERM 4022 5124813 - 5124799 - G 100 -11.4 -5.63517 | TGTGCAAATAAAAAA TGGGCG AAG CGCCCA TCCCTGAAAGCGCCG TERM 4023 5124881 - 5124866 - R 95 -10.4 -4.72272 | opp_overlap 5124880 TTCGGTTAGCAAAAA GCCCCT GAAA AGGGGC TCCGCTGAAGCTGGT TERM 4024 5125059 - 5125036 - R 83 -14.6 -3.37622 | opp_overlap 5125033 5125032, overlap 5125040 AACATTCACCTACAA GAAAGCCCGC TAAA GCGGGCTCTC AAGCTTTAATTGGTA TERM 4025 5125055 - 5125040 - R 90 -11.8 -4.33417 | opp_overlap 5125033 5125032, overlap 5125036 TTCACCTACAAGAAA GCCCGC TAAA GCGGGC TCTCAAGCTTTAATT secG 5125575 - 5125177 - | preprotein translocase subunit SecG tpiA 5126335 - 5125580 - | triosephosphate isomerase Pput_4582 5127741 - 5126401 - | phosphoglucosamine mutase TERM 4026 5127050 - 5127028 - G 70 -9.9 -3.57144 | gap 1 GCCGTCACCGTCAAA GGCAATGCCG AGAT CGGCA-TGCC CGACCAGGACAGCAG Pput_4583 5128609 - 5127758 - | dihydropteroate synthase TERM 4027 5128587 - 5128564 - G 95 -16 -3.93401 | GCGACAAATCAAGAA CCCGGCTGCC GCAA GGCAACCGGG TGGGGTACTGCACTG Pput_4584 5130522 - 5128618 - | ATP-dependent metalloprotease FtsH Pput_4585 5131352 - 5130729 - | ribosomal RNA methyltransferase RrmJ/FtsJ Pput_4586 5131455 - 5131763 + | hypothetical protein Pput_4587 5132225 - 5131776 - | hypothetical protein TERM 4028 5132058 - 5132022 - G 85 -15.1 -3.43049 | opp_overlap 5132021, overlap 5132013 CAACAAGCCAAGCAA CGCCACGCCGATCAACC AGC GGTCGATCTGCCCGGCG ATATCCTGCACCAGC TERM 4029 5132170 - 5132126 - G 73 -12.7 -3.12327 | overlap 5132124 GCCCGACATGGAACA CCCACAGGCCACCGACCCAGA AAA CCTGGGCCAGTTGCCAGAGGA TCCCCTCGAGGGATG greA 5132685 - 5132203 - | transcription elongation factor GreA carB 5135849 - 5132682 - | carbamoyl phosphate synthase large subunit Pput_4590 5137169 - 5136009 - | carbamoyl phosphate synthase small subunit TERM 4030 5137226 - 5137197 - R 100 -16.5 -5.02074 | opp_overlap 5137197 GCAGGTTGCAAAAAA GCGGAGTGACGTA TGGA CACGTCACCCCGC TTTCATGTGCTGAAT TERM 4031 5137197 - 5137226 + r 88 -13.6 -3.8647 | opp_overlap 5137197 GCAGGTTGCAAAAAA GCGGAGTGACGT ATGGAC ACGTCACCCCGC TTTCATGTGCTGAAT Pput_4591 5138275 - 5137472 - | dihydrodipicolinate reductase Pput_4592 5139413 - 5138289 - | chaperone protein DnaJ TERM 4032 5139010 - 5139026 + g 70 -10.1 -3.65314 | ACGCGGATGCTGACC GTGGTGC CAC GCACCGC TTCTTCCAGGTTCAG TERM 4033 5139555 - 5139525 - R 80 -14.7 -2.91681 | gap 1, overlap 5139542 CTCGAATTCCAGATA CGCCAACGCGGGAG CAAG CCCCCGCGC-GGCG ACATCCTACCAGCTC TERM 4034 5139595 - 5139626 + r 70 -9.5 -3.50953 | opp_overlap 5139580 5139601 5139604, overlap 5139593 5139598 5139604 CGACGGTGAACCGGC CGACAACATGCAG GGATTA CTGCTTGTTGTTG TCTTTCACTTCTTCG Pput_4593 5141536 - 5139701 - | molecular chaperone DnaK TERM 4035 5141137 - 5141162 + g 73 -8.9 -4.0219 | overlap 5141125 5141122 5141139 5141140 CCGCTTCGGTGACCG GCTCGCCGAGG TAGT CTTCGGCGGTC TTCTTCATTTTCTTC TERM 4036 5141139 - 5141160 + g 70 -10.1 -3.57279 | overlap 5141125 5141122 5141137 5141140 GCTTCGGTGACCGGC TCGCCGAGG TAGT CTTCGGCGG TCTTCTTCATTTTCT Pput_4594 5142195 - 5141638 - | GrpE protein Pput_4595 5142388 - 5144061 + | DNA repair protein RecN TERM 4037 5144051 - 5144068 + T 86 -11.3 -4.08064 | AGATGGTGGTGAGCG GCAAGGC CTGA GCCTTGC TTTTCCAGGACGATT TERM 4038 5144230 - 5144205 - T 89 -17.7 -3.01422 | opp_overlap 5144209, overlap 5144209 CAGCCCCAGAAAGCA CAAAGGCGACC CGAA GGTCGCCTTTG CTATCCATAACGAAA TERM 4039 5144209 - 5144226 + T 85 -12.7 -3.84825 | opp_overlap 5144205 5144209 CCCAGAAAGCACAAA GGCGACC CGAA GGTCGCC TTTGCTATCCATAAC TERM 4040 5144226 - 5144209 - T 91 -12.7 -4.17701 | opp_overlap 5144209, overlap 5144205 CCCAGAAAGCACAAA GGCGACC CGAA GGTCGCC TTTGCTATCCATAAC Pput_4596 5144655 - 5144251 - | ferric uptake regulator family protein TERM 4041 5144675 - 5144687 + H 71 -9.1 -3.71284 | AGCTTTCTCGCCGAT GCTGC TTC GCAGC TTCTCTTAATACGGG TERM 4042 5145203 - 5145191 - g 80 -4.7 -4.8543 | overlap 5145192 CAACCTGTAGAAAAA CCGGC CAA GCCTG GTTCGACCGAAGAGT Pput_4597 5144753 - 5145289 + | SmpA/OmlA domain-containing protein TERM 4043 5145294 - 5145282 - T 74 -10.5 -3.54424 | CCGCACCGCTGGAAA CCCGC TAA GCGGG AACAGCAGATGCAAA TERM 4044 5145313 - 5145331 + T 100 -16 -5.27938 | opp_overlap 5145313 AGCAGATGCAAAAAA GCCCGGAC CTG GTCCGGGC TTTTTGTTTGCGCCT TERM 4045 5145331 - 5145313 - T 100 -16 -5.13473 | opp_overlap 5145313 AGCAGATGCAAAAAA GCCCGGAC CTG GTCCGGGC TTTTTGTTTGCGCCT Pput_4598 5145787 - 5145353 - | cyclase/dehydrase TERM 4046 5146085 - 5146072 - g 77 -3.7 -4.8622 | overlap 5146073 GCTGGGAAGTAAAAA GCCTG CGAG CCGGC AAGGCGCACCTGACT smpB 5145951 - 5146433 + | SsrA-binding protein Pput_4600 5147405 - 5146638 - | GntR domain-containing protein Pput_4601 5147662 - 5149332 + | L-lactate transport TERM 4047 5149374 - 5149334 - f 88 -13.3 -3.78775 | gap 1, overlap 5149340 5149341 TGGTTCATCACTAAA GTGAAAGGGGCCGGGCGC CGTCGC GCGCCCGGCAC-TCCCAC AAGCAACGCTGCGAG TERM 4048 5149369 - 5149340 - f 85 -12 -3.87551 | overlap 5149334 5149341 ATCACTAAAGTGAAA GGGGCCGGGCGC CGTCGC GCGCCCGGCACT CCCACAAGCAACGCT TERM 4049 5149368 - 5149341 - f 83 -15.5 -2.91807 | overlap 5149340 5149334 TCACTAAAGTGAAAG GGGCCGGGCGC CGTCGC GCGCCCGGCAC TCCCACAAGCAACGC lldD 5149395 - 5150540 + | L-lactate dehydrogenase TERM 4050 5150605 - 5150569 - f 73 -13 -2.71364 | gap 1 CCACCGCCTGAATGA CCCGGGGCATGTAGCGC ACAG ACGCCACA-GCCCCGCG AGGAGACTGCATGAG TERM 4051 5152569 - 5152612 + G 75 -13.8 -3.05384 | gap 1, opp_overlap 5152577 ACCGCCGCCAATACC GCACGCAAGCTG-CTAGGCGC CCC GCGCCTGGGCCGCCTGAGTGC TTCGCTGAGCAAAGC Pput_4603 5150616 - 5153426 + | D-lactate dehydrogenase (cytochrome) Pput_4604 5153901 - 5154191 + | hypothetical protein TERM 4052 5154233 - 5154200 - f 91 -13.2 -4.13767 | gap 1 CGCGTGAGCCCAAAA GCGGGCGAC-TGGAC CGGCT GTCGACGTCGCCCGC GCAATGGGGTATACT TERM 4053 5154724 - 5154685 - f 71 -9.4 -3.72576 | opp_overlap 5154697, overlap 5154686 5154697 CCCGGCTCCACCAAA TGATCAAAAAAAGACGTC CACG GACGTCTTTTTTTGTGCC TGGAAGTCAGTGAAA TERM 4054 5154723 - 5154686 - f 74 -12.9 -2.83403 | opp_overlap 5154697, overlap 5154685 5154697 CCGGCTCCACCAAAT GATCAAAAAAAGACGTC CACG GACGTCTTTTTTTGTGC CTGGAAGTCAGTGAA TERM 4055 5154697 - 5154712 + F 100 -9 -5.64274 | opp_overlap 5154697 5154686 5154685 AAATGATCAAAAAAA GACGTC CACG GACGTC TTTTTTTGTGCCTGG TERM 4056 5154712 - 5154697 - f 100 -9 -5.5943 | opp_overlap 5154697, overlap 5154686 5154685 AAATGATCAAAAAAA GACGTC CACG GACGTC TTTTTTTGTGCCTGG TERM 4057 5155520 - 5155500 - g 82 -3.1 -5.10665 | opp_overlap 5155514 5155515, overlap 5155502 5155503 ACCGAAGAAAGAAAA TATGGCGGC GCT ACCGCCCGA GGAGCTTCCTGAGCT Pput_4605 5154871 - 5156127 + | phage integrase family protein TERM 4058 5156316 - 5156294 - f 79 -2 -5.27779 | GCTAACACTAAAAAA GCGACAAA CGGCCAC TTTGCCAC TGACAGCCACCGACT TERM 4059 5156443 - 5156425 - f 79 -12.4 -3.62478 | GAACGAAGGTTCAAA GCGCTGCC TTA GGCAGCAC CCCAGATGACCAGAG TERM 4060 5156752 - 5156734 - f 70 -10.3 -3.28712 | overlap 5156747 5156748 TTCCCCTCGTGACAA TCGGCGT GACAA ACGCCGA TATCACCAGCAACAG Pput_4606 5157092 - 5158489 + | hypothetical protein Pput_4607 5158473 - 5158832 + | hypothetical protein Pput_4608 5158810 - 5159790 + | phage integrase family protein Pput_4609 5159787 - 5160062 + | hypothetical protein TERM 4061 5160463 - 5160452 - T 71 -4.4 -4.67234 | ACGTAATTGCAAAAA CTCA ACGT TGAG GGGATTACGGCCTAG Pput_4610 5162438 - 5160468 - | hypothetical protein Pput_4611 5164153 - 5162468 - | restriction modification system DNA specificity subunit Pput_4612 5165619 - 5164150 - | N-6 DNA methylase TERM 4062 5164665 - 5164681 + g 78 -15.1 -2.71364 | opp_overlap 5164648, overlap 5164676 CGTCGGGCAGCACTA CGGCGGC GCG GCCGCCG TCCTTGAGCAGGTGC TERM 4063 5164926 - 5164936 + g 74 -2.4 -4.82901 | TGGTGGCCAGCAGGT GCGG CAG CGGC TTTTTCTCCACGCCG TERM 4064 5165055 - 5165065 + g 73 -6.8 -4.2679 | CAGTGCCGCAGGCCG GGTC CAT GACC TTTTCGTCCAGCTTG Pput_4613 5166455 - 5165622 - | hypothetical protein Pput_4614 5168831 - 5166459 - | EcoEI R domain-containing protein Pput_4615 5172880 - 5169632 - | non-specific serine/threonine protein kinase Pput_4616 5174505 - 5172880 - | hypothetical protein TERM 4065 5173816 - 5173799 - G 73 -11.3 -3.5393 | ACCAGGTCGGCCAAA CGCTGAG AGAA CTCAGCG TCATCCAACAAGAAA Pput_4617 5175245 - 5174502 - | hypothetical protein Pput_4618 5177451 - 5175259 - | hypothetical protein TERM 4066 5177227 - 5177267 + g 72 -2.6 -4.78149 | gap 2 ATTGGAGCCTTTGAA CAGTCGCTCCAGCTCTGATC GCC GATCTGA-CGGGAGA-ACTG TTTTTGCGTTCTCCA Pput_4619 5179359 - 5178049 - | McrBC 5-methylcytosine restriction system component-like protein Pput_4620 5181944 - 5179356 - | ATPase TERM 4067 5180286 - 5180253 - G 70 -10.2 -3.61715 | opp_overlap 5180253 CAGCTGCCGCAACAA GCTCAATGGCAGCG GTAGTA CGCCGCCCTTGGGC TTGTCCAACTCCACC TERM 4068 5182087 - 5182074 - R 71 -4.5 -4.56187 | gap 1 GATAATCAAAAATAA GCAGCC AAC GGC-GC AACTGGTGAGATGTC Pput_4621 5183448 - 5182768 - | hypothetical protein Pput_4622 5184018 - 5183752 - | hypothetical protein Pput_4623 5184132 - 5185007 + | transcriptional regulator-like protein TERM 4069 5185313 - 5185279 - T 78 -13.6 -3.20723 | opp_overlap 5185277 CTTTGAGCAAGGCAA TTGCCCCCTCAGATTT GGC ACACCTGTGGGGGCAA ACTTACTCGCGAACA Pput_4624 5187750 - 5185357 - | TonB-dependent siderophore receptor Pput_4625 5188991 - 5188239 - | hypothetical protein TERM 4070 5189271 - 5189241 - R 79 -9.6 -4.09739 | opp_overlap 5189241 GCAAGTTTCTGAAAA CGGTCAAGGACGCC CTG GGTATCCCTGCCCG TTTACGCCAGGTCAT Pput_4626 5190093 - 5189470 - | hypothetical protein TERM 4071 5190261 - 5190232 - R 100 -18.7 -4.82901 | opp_overlap 5190236, overlap 5190236 TCTGGCCCAGAAAAA CAAAGGGCACCCA TCCT CGGGTGCCCTTTG CCTTACAGCCAGGTG TERM 4072 5190257 - 5190236 - R 100 -13.7 -4.96501 | opp_overlap 5190236, overlap 5190232 GCCCAGAAAAACAAA GGGCACCCA TCCT CGGGTGCCC TTTGCCTTACAGCCA TERM 4073 5190236 - 5190257 + r 85 -13 -3.75153 | opp_overlap 5190232 5190236 GCCCAGAAAAACAAA GGGCACCC ATCCTC GGGTGCCC TTTGCCTTACAGCCA Pput_4627 5191675 - 5190284 - | amino acid permease-associated region TERM 4074 5191610 - 5191582 - G 76 -8 -4.27617 | opp_overlap 5191603 CAGAGCCGACGAAAA GTCCGGCGCCGA TGATG CCGGCGATGGAC AGCATCGTTACGTGA TERM 4075 5191908 - 5191960 + r 84 -3.3 -5.36689 | gap 1, opp_overlap 5191894 5191908, overlap 5191902 5191909 AGGGCATTTCCAATA GCGCCAGATGTCGCGAATGGCATG CCCGAT CGCGCCAC-CGGGCCATTTGGTGC TTTTGTTTTTCATTT TERM 4076 5192071 - 5192054 - R 100 -14.1 -5.4505 | opp_overlap 5192053 GCCGCCAACAAAAAA GCCCCGG TTTC CCGGGGC CTCTGTTGCCAAGGC Pput_4628 5193436 - 5192093 - | d-galactonate transporter TERM 4077 5193269 - 5193251 - G 91 -9.6 -4.4715 | GGCGAAGGCAGAAAA GATCATGC CCA GCATGACC GGATCGAGCCCCAGG Pput_4629 5194508 - 5193531 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pput_4630 5194581 - 5195468 + | LysR family transcriptional regulator Pput_4631 5197062 - 5195707 - | glucarate dehydratase Pput_4632 5198434 - 5197082 - | major facilitator transporter Pput_4633 5198694 - 5199395 + | GntR domain-containing protein Pput_4634 5200494 - 5199484 - | alcohol dehydrogenase TERM 4078 5200013 - 5199975 - G 81 -10.2 -4.11394 | overlap 5199976 ACTGCAGGGCGAAAA TCGACACACCGCCGGTAC CCT GCACCAGCACCGTGTCGC CGGGCTTGAGGTGAT TERM 4079 5200012 - 5199976 - G 75 -13.7 -3.06515 | overlap 5199975 CTGCAGGGCGAAAAT CGACACACCGCCGGTAC CCT GCACCAGCACCGTGTCG CCGGGCTTGAGGTGA TERM 4080 5200115 - 5200100 - G 70 -10.4 -3.55444 | TCGGCATGGCTGAAA CCCTGG GGTG CCAGGG TGAAGGCGGTGGCGC Pput_4635 5201249 - 5200659 - | HAD family hydrolase Pput_4636 5202115 - 5201246 - | acyl-CoA thioesterase II TERM 4081 5202147 - 5202173 + r 70 -10.1 -3.53444 | gap 1, overlap 5202148 5202152 GAGCGAGCCTAGCTC GCGATGCGCCGC CCGA GCGGCGC-TCGA TTTCACAGGCGCTGA TERM 4082 5202148 - 5202172 + r 75 -13.6 -2.71924 | gap 1, overlap 5202147 5202152 AGCGAGCCTAGCTCG CGATGCGCCGC CCGA GCGGCGC-TCG ATTTCACAGGCGCTG TERM 4083 5202152 - 5202169 + r 78 -14.1 -2.64155 | overlap 5202148 5202147 AGCCTAGCTCGCGAT GCGCCGC CCGA GCGGCGC TCGATTTCACAGGCG Pput_4637 5202834 - 5202265 - | GCN5-related N-acetyltransferase Pput_4638 5203014 - 5203700 + | putative phosphohistidine phosphatase, SixA TERM 4084 5203794 - 5203778 - f 82 -13.7 -3.53012 | opp_overlap 5203773 CCTTGCGTCGCGAAA GGGCTGC ACA GCAGCCC CGGGGTTTCAGCGTC TERM 4085 5203826 - 5203842 + F 88 -15.1 -3.53012 | opp_overlap 5203822 5203821 ATGCAAATAATGCCG GGGCCGC TTC GCGGCCC TTTCGCGACGCAAGG Pput_4639 5204199 - 5205152 + | histone deacetylase superfamily protein Pput_4640 5205301 - 5206539 + | hypothetical protein Pput_4641 5208023 - 5206692 - | DEAD/DEAH box helicase domain-containing protein TERM 4086 5206789 - 5206815 + g 90 -8.7 -4.90525 | gap 1 TCAGTGCTGTCCATC CAGCGCCCCAGC CCGC GCTTGG-CGCTG TTTTCTTTCGGCTTC Pput_4642 5208999 - 5208079 - | hypothetical protein Pput_4643 5209753 - 5209118 - | DNA polymerase III, epsilon subunit Pput_4644 5210242 - 5209763 - | hypothetical protein TERM 4087 5210244 - 5210254 + r 70 -3.2 -4.80882 | GCGATCTTTTTCACC TGGG AAC CTCA TTTTTGGTCTGGAGT Pput_4645 5211162 - 5210404 - | putative periplasmic ligand-binding sensor protein Pput_4646 5211330 - 5211986 + | hypothetical protein Pput_4647 5212052 - 5212591 + | hypothetical protein Pput_4648 5215189 - 5212661 - | ATP-dependent helicase HrpB TERM 4088 5215443 - 5215459 + G 72 -12.3 -3.38656 | overlap 5215440 TGTGGTTGCCGCCAT GGATGCC ATT GGCATCC TGTTCTATGTAATCC Pput_4649 5215306 - 5215725 + | hypothetical protein Pput_4650 5215748 - 5216620 + | cation diffusion facilitator family transporter TERM 4089 5216787 - 5216750 - T 95 -17.2 -3.53444 | GTATTCGCGGGTAAA CCCGCTCCTAC-ACGCGC ACAG GC-CGTTGTAGGAGCGGG TTCACCCGCGAATGG Pput_4651 5217815 - 5216898 - | hypothetical protein TERM 4090 5217423 - 5217388 - G 80 -4.6 -4.83615 | gap 1 TAGCGGTCAGAAAAA TGGTCCACCGTGT-GCC CCG GGCGATACTGCGGCCCA GGCCCCCAGCCATTG TERM 4091 5217842 - 5217823 - H 100 -15 -5.21709 | opp_overlap 5217827 CCCGACATGAAAAAA GGGAGGCC ACAG GGCCTCCC TTCAGGAATTGTCGT Pput_4652 5218130 - 5218606 + | AsnC family transcriptional regulator Pput_4653 5218660 - 5218863 + | hypothetical protein Pput_4654 5219609 - 5218977 - | pseudouridine synthase TERM 4092 5219564 - 5219586 + g 81 -13.4 -3.62597 | GTGGGCCGGCGGCAG GCCGCGCC TGGGGGC GGCGCGGC TTGTTACGGGGTGGC Pput_4655 5221166 - 5219616 - | AMP nucleosidase TERM 4093 5219950 - 5219967 + g 74 -4.7 -4.63527 | TCGTAGGTCAGCACC GTGCCGG TGCG CAGGCGC TTTTTCAACTGCTCG TERM 4094 5221081 - 5221069 - G 74 -5.5 -4.51097 | opp_overlap 5221069 5221074 TCAACGACTACAAAA GCGTG GCT CACAC TGTGCTTCCTGTCTG Pput_4656 5222837 - 5221185 - | acyl-CoA dehydrogenase domain-containing protein Pput_4657 5225037 - 5223049 - | integral membrane sensor signal transduction histidine kinase TERM 4095 5225237 - 5225218 - H 77 -2.8 -5.07652 | overlap 5225222 5225230 GCTTTCAAAAGAAAA CCAATCAG CAAC CTGACCGA TCGATCAGTAAAACT Pput_4658 5225303 - 5226100 + | phosphomethylpyrimidine kinase TERM 4096 5226483 - 5226497 + G 93 -9.2 -4.79756 | overlap 5226439 GAAGGCGCCAGCTAC GTGGCC TTT GGCCGC TTTTTCAATTCTGTC thiE 5226114 - 5226737 + | thiamine-phosphate pyrophosphorylase TERM 4097 5227221 - 5227210 - g 70 -7.2 -4.07687 | opp_overlap 5227210 AGCCTGCTGGTAAAA GCCG GCTC CGGC TTGCTGACCCAAGGC Pput_4660 5226754 - 5228037 + | glutamate-1-semialdehyde aminotransferase TERM 4098 5228534 - 5228518 - g 100 -9.3 -5.12707 | opp_overlap 5228516, overlap 5228529 GCAAACGCCAAAAAA CCTGGGC AAA GCCCTGG ACTGGTTCCAGAAGG Pput_4661 5228282 - 5228827 + | Sel1 domain-containing protein Pput_4662 5229157 - 5228831 - | hypothetical protein Pput_4663 5229390 - 5230388 + | PhoH family protein Pput_4664 5230381 - 5230854 + | putative metalloprotease TERM 4099 5230989 - 5230960 - g 74 -5 -4.63527 | gap 1, overlap 5230961 CCATGAGCCGAAAAA CCGC-CAGGAGCT GCTTG AGCTGCTGCGCGA AGCCCATCAGAACAA TERM 4100 5231480 - 5231496 + G 84 -4.3 -5.14563 | opp_overlap 5231480 5231481, overlap 5231481 GACAGCTACATCAAA CCACTGC CCA GCGGTGA TTTTTTGGTCAAAGC Pput_4665 5230880 - 5231719 + | CBS domain-containing protein lnt 5231728 - 5233245 + | apolipoprotein N-acyltransferase Pput_4667 5234153 - 5233392 - | hypothetical protein TERM 4101 5234228 - 5234189 - R 78 -12.8 -3.32844 | opp_overlap 5234183 5234190, overlap 5234190 5234192 GCGTGCAGCCTAGAA GGATCGACGCCGGTCAAC AAGT GCGTACCGGCGTCGATCT TGAGTTGTGTGATAG TERM 4102 5234227 - 5234190 - R 85 -16.3 -2.59564 | opp_overlap 5234183 5234190, overlap 5234189 5234192 CGTGCAGCCTAGAAG GATCGACGCCGGTCAAC AAGT GCGTACCGGCGTCGATC TTGAGTTGTGTGATA TERM 4103 5234190 - 5234227 + r 83 -14.3 -3.27164 | opp_overlap 5234190 5234189 5234192, overlap 5234183 CGTGCAGCCTAGAAG GATCGACGCCGGT CAACAAGTGCGT ACCGGCGTCGATC TTGAGTTGTGTGATA TERM 4104 5234225 - 5234192 - R 74 -13.1 -2.83822 | opp_overlap 5234190 5234183, overlap 5234190 5234189 TGCAGCCTAGAAGGA TCGACGCCGGTCAAC AAGT GCGTACCGGCGTCGA TCTTGAGTTGTGTGA Pput_4668 5234602 - 5234288 - | hypothetical protein TERM 4105 5234681 - 5234667 - H 71 -4.9 -4.56597 | overlap 5234670 GCGTCGCTGCAAAAA GCAGC CGTGC GCCGC GACCAGCGGCCATTC leuS 5234716 - 5237436 + | leucyl-tRNA synthetase TERM 4106 5237471 - 5237443 - f 100 -21.8 -4.30978 | GCCAACTGATGAAAA CGCCCACCCGCA TTGGC TGCGGGTGGGCG GAACAGGCCCAAAAG Pput_4670 5237498 - 5238103 + | rare lipoprotein B TERM 4107 5238128 - 5238104 - f 74 -11.3 -3.34344 | opp_overlap 5238109, overlap 5238092 GTACCGGGCAACTAA GCCCGCGAGGG GCG CCCTCGGGCGC CCCACCTGTTCCCCA TERM 4108 5238109 - 5238134 + F 70 -11.7 -3.04144 | opp_overlap 5238104 GGGCAACTAAGCCCG CGAGGGGCGCC CTCG GGCGCCCCACC TGTTCCCCATGAAAC TERM 4109 5239016 - 5238998 - g 71 -8.8 -3.86897 | overlap 5238999 CCCATCTGGGACAAA CGCCGACC GCT GGTCAGCA AGGCCCTGCAGCGCC holA 5238143 - 5239180 + | DNA polymerase III subunit delta TERM 4110 5239424 - 5239409 - g 73 -3.2 -4.78107 | overlap 5239419 5239421 5239422 CACCATGAGCAAAAA GCCG AAAAAGCA CGGC CCCAACAAGGCCAAG TERM 4111 5239507 - 5239547 + G 95 -9.8 -4.67353 | gap 1, opp_overlap 5239497 5239498, overlap 5239511 5239512 5239515 GCAAAGGCAGCTACC GCCGCGAAGCCTTCCAATC GAGA GATTGGGAGGCTTC-CTAC TTTTTGGCTGCATGA TERM 4112 5239511 - 5239544 + G 82 -14.7 -3.26405 | overlap 5239507 5239512 5239515 AGGCAGCTACCGCCG CGAAGCCTTCCAATC GAGA GATTGGGAGGCTTCC TACTTTTTGGCTGCA TERM 4113 5239512 - 5239543 + G 86 -18.2 -2.55361 | overlap 5239511 5239507 5239515 GGCAGCTACCGCCGC GAAGCCTTCCAATC GAGA GATTGGGAGGCTTC CTACTTTTTGGCTGC TERM 4114 5239515 - 5239540 + G 79 -14.1 -3.4158 | overlap 5239512 5239511 5239507 AGCTACCGCCGCGAA GCCTTCCAATC GAGA GATTGGGAGGC TTCCTACTTTTTGGC Pput_4672 5239398 - 5239562 + | hypothetical protein Pput_4673 5239623 - 5240939 + | lytic murein transglycosylase TERM 4115 5240969 - 5240943 - T 76 -13.6 -2.80016 | opp_overlap 5240945, overlap 5240940 CGGCAGCAGTAAGCA TTTCGGGGCCGC AGC GCGGCCCCGGTA ATCTCACGCCCTGAA TERM 4116 5240945 - 5240967 + T 86 -18.4 -2.62396 | opp_overlap 5240943 5240940 GCAGCAGTAAGCATT TCGGGGCCGC AGC GCGGCCCCGG TAATCTCACGCCCTG Pput_4674 5241911 - 5240973 - | peptidase U61, LD-carboxypeptidase A TERM 4117 5241984 - 5241942 - R 100 -17.9 -4.05033 | gap 1, opp_overlap 5241948, overlap 5241948 CGCATGGGACACAAA CAAAAATGCCGATGC-CGCC CTTG GGCGCGCATCGGCATCTGTG GCTCTGCTCTAGGCT TERM 4118 5241948 - 5241978 + r 89 -17.7 -2.93858 | gap 1, opp_overlap 5241942 5241948 GGACACAAACAAAAA TGCCGATGC-CGCC CTTG GGCGCGCATCGGCA TCTGTGGCTCTGCTC TERM 4119 5241978 - 5241948 - R 100 -17.7 -5.42975 | gap 1, opp_overlap 5241948, overlap 5241942 GGACACAAACAAAAA TGCCGATGC-CGCC CTTG GGCGCGCATCGGCA TCTGTGGCTCTGCTC Pput_4675 5243026 - 5242010 - | lipoyl synthase lipB 5243676 - 5243029 - | lipoyltransferase TERM 4120 5243653 - 5243606 - G 73 -8.5 -4.07568 | gap 2 CGCTGCTCGGTAAAA CGACGCATGGCCTCCAGCACC GGTTCATA GG-GCTGCAGGCCAAGC-TCG CGAAAACCGAGGCAG TERM 4121 5243684 - 5243736 + r 72 -10.6 -3.47349 | opp_overlap 5243681 5243684 GCGGACATCAAAGCA CCATTTTCACGATGCCGGTAGCGC GCAGG GCGCTGTTGATATCGTGCAACTGG TTCTCGCTTTCGGCA Pput_4677 5243951 - 5243676 - | hypothetical protein TERM 4122 5244011 - 5243987 - R 89 -12.8 -3.9461 | overlap 5243989 CCGTGGCAACAACAA CACCCCCGCG GTAGG CGCGGGGGCA TGCAGGTCACGTATC TERM 4123 5244009 - 5243989 - R 90 -15.4 -3.56318 | overlap 5243987 GTGGCAACAACAACA CCCCCGCG GTAGG CGCGGGGG CATGCAGGTCACGTA Pput_4678 5245236 - 5244025 - | Serine-type D-Ala-D-Ala carboxypeptidase Pput_4679 5246407 - 5245406 - | rare lipoprotein A TERM 4124 5245864 - 5245880 + g 78 -3.6 -5.00616 | overlap 5245865 CGTGCGCGGTACCGA TCTCGG CATAA CCGAGC TTTTTTGCCGCAGCA Pput_4680 5247417 - 5246407 - | lytic murein transglycosylase B Pput_4681 5248577 - 5247435 - | rod shape-determining protein RodA Pput_4682 5250466 - 5248577 - | peptidoglycan glycosyltransferase TERM 4125 5248603 - 5248634 + g 79 -8.6 -4.25104 | overlap 5248604 ATTCCTGGGTAACGG TGGCGGGCGCGAAC TCGG GTTTGAGCCGGCCG TTTTCGTCGAGCAGC TERM 4126 5250423 - 5250379 - G 74 -13.6 -2.90061 | gap 1, opp_overlap 5250376 5250414, overlap 5250376 ACACGCACACAAGCA GCATGAT-CGCAACTGCGCCG ACCA CGACGCGGTTGCGCACCAGGC GGGCGTCTTTCTCGT Pput_4683 5250950 - 5250483 - | SPOUT methyltransferase superfamily protein Pput_4684 5251437 - 5250961 - | iojap-like protein nadD 5252116 - 5251424 - | nicotinic acid mononucleotide adenylyltransferase proA 5253356 - 5252085 - | gamma-glutamyl phosphate reductase TERM 4127 5253224 - 5253261 + gH 71 -8.9 -3.7941 | CGAGTTCGGCACGGG CAGCGTCCAGCGCGTCG GCGG CGGCTTGCAGGGCGCGG TTCTTCTGCGCGGTG Pput_4687 5253687 - 5254355 + | 3-methyladenine DNA glycosylase Pput_4688 5254358 - 5255674 + | phosphoesterase, PA-phosphatase related TERM 4128 5255706 - 5255746 + T 70 -9.8 -3.53012 | gap 2 CTATTCGCGGGTGAA CCCGCTCCTAC-ACTGG-GT ATC GCGCTTGTCGTAGGAGCGGG TTTACCCGCGAAGGG Pput_4689 5256376 - 5255786 - | peptidase S16, lon domain-containing protein Pput_4690 5257102 - 5256386 - | LrgB family protein Pput_4691 5257461 - 5257099 - | LrgA family protein TERM 4129 5257378 - 5257360 - G 78 -12.4 -3.75738 | GAGCAGCAGCAACAA CAGGCCGA TGA TCGGCCCG GGCAAAAACGGCACA Pput_4692 5257605 - 5258060 + | dehydratase TERM 4130 5258095 - 5258065 - f 79 -14.6 -2.87132 | GTTTTGTCTGATACA TGCCCGGGGGCTGC AGT GCAGCCCCCGATCC ACAAATCCCCCGCAC prmA 5258177 - 5259055 + | ribosomal protein L11 methyltransferase TERM 4131 5259283 - 5259244 - g 71 -6.2 -4.25104 | GCTGCTGGAGCAAAA CCGCGCCGCTACCACCAG CGCC CCCGTGGTGCCGGCACCG GTACCTCCAGCGCCT Pput_4694 5259098 - 5260453 + | Zinc finger-domain-containing protein TERM 4132 5261002 - 5260982 - g 100 -5.3 -5.40072 | opp_overlap 5260982 5260990 5260992 5260997, overlap 5260983 5260984 TGTCCGGCAAAAAAA GTCTGCAAC AAA GCCGCAGGC TCTGCTTTATTGAGA TERM 4133 5261323 - 5261293 - g 71 -6 -4.3739 | opp_overlap 5261320, overlap 5261295 5261313 CACCTCGCCAGAAAA GGCCCGGGCGGT GCTGGAA ACCACCGGGGTC GATGGCCTGTTGATC Pput_4695 5260661 - 5261674 + | nifR3 family TIM-barrel protein fis 5261671 - 5261991 + | DNA-binding protein Fis TERM 4134 5262013 - 5262036 + F 84 -5.2 -5.1675 | opp_overlap 5262013 ATCCCATCCAGAAAA GGCGACTC CCTGAACA GAGGCGCC TTTTTTGCTGACTCC TERM 4135 5262036 - 5262013 - f 72 -5.9 -4.42653 | opp_overlap 5262013 ATCCCATCCAGAAAA GGCGACTCC CTGAAC AGAGGCGCC TTTTTTGCTGACTCC purH 5262073 - 5263680 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Pput_4698 5263827 - 5265119 + | phosphoribosylamine--glycine ligase Pput_4699 5265258 - 5268029 + | integral membrane sensor hybrid histidine kinase TERM 4136 5268640 - 5268666 + G 74 -5.1 -4.57569 | overlap 5268642 5268643 GTTTGATGGGGCTGT TCGTCTGTGCC CTGGC GGCGCAGATCA TTTTTACAGGGATCA Pput_4700 5268105 - 5268701 + | multiple antibiotic resistance (MarC)-related protein Pput_4701 5269321 - 5268698 - | hypothetical protein Pput_4702 5270007 - 5269318 - | hypothetical protein TERM 4137 5270060 - 5270038 - R 95 -14.8 -3.7956 | CAAAGAACCGAACAA GGCGGCGTTG CGA CTACGCCGCC GAGCAATCAGATGTC Pput_4703 5270747 - 5270067 - | hypothetical protein TERM 4138 5270298 - 5270327 + g 76 -6.9 -4.4634 | opp_overlap 5270301, overlap 5270294 5270299 TTTTGAGGTTTCAAT GCAGGAGGCCAGG CCGA CCAGGCCCCTGGC TTTGTTCTTGCGCTT Pput_4704 5272522 - 5270840 - | precorrin-3B C17-methyltransferase Pput_4705 5273256 - 5272525 - | precorrin-2 C(20)-methyltransferase cobH 5273882 - 5273256 - | precorrin-8X methylmutase Pput_4707 5275191 - 5273875 - | precorrin-3B synthase Pput_4708 5275450 - 5276661 + | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 4139 5276911 - 5276949 + G 74 -5.9 -4.42386 | gap 1, overlap 5276915 5276916 CCACGGTGCCCTGCT CTATAGCCAGG-TGCGCC TGCT GGCGGAACCTGGCATTGG TTTTGTCGCTGGCAG cbiD 5276654 - 5277748 + | cobalt-precorrin-6A synthase Pput_4710 5277745 - 5278464 + | cobalt-precorrin-6x reductase Pput_4711 5278593 - 5279030 + | hypothetical protein Pput_4712 5279057 - 5279911 + | band 7 protein TERM 4140 5279998 - 5280053 + F 73 -12.6 -2.69471 | gap 1, opp_overlap 5279990 5279987 5279998, overlap 5279997 AAATTGAGCAAGACA GTTGCTCCCACAGGACAGCG-CAGTAT TCG AGGCTGACGCAATTCTGTGGGAGCGGC CTTGTGTCGCGATGG Pput_4713 5280183 - 5280572 + | hypothetical protein Pput_4714 5280620 - 5281105 + | hypothetical protein TERM 4141 5281320 - 5281280 - g 89 -17 -3.14564 | gap 1 CCACGCGGGCATGAA CATGCCGATGGACATGCCG ATGG CGGC-TGCCCATCAGCACG GCGGCGACGCCCACC Pput_4715 5281128 - 5281559 + | hypothetical protein Pput_4716 5281626 - 5283692 + | TonB-dependent copper receptor TERM 4142 5283701 - 5283720 + F 77 -11.4 -3.62096 | opp_overlap 5283700 5283699 CTTCTGACAACAACG GGCGCAGC TTCG GTTGCGCC TTTCAGCTGGTCAAA Pput_4717 5283749 - 5285116 + | peptidase TERM 4143 5285154 - 5285194 + F 88 -14.8 -3.53012 | opp_overlap 5285154 CTTTTCGCGGGTAAA CCCGCTCCTACAGGGG ACCGCGTTG CCTTTGTAGGGGCGGG TTTACCCGCGAAGAG Pput_4718 5285338 - 5286744 + | D-alanine/D-serine/glycine permease TERM 4144 5287796 - 5287820 + G 77 -13.5 -3.35679 | opp_overlap 5287777 5287787 CAACCAGGGCCTGAA GGCCACCGACG TGC CGGTGGTGGCC TTCTCGGTGGGCGAG TERM 4145 5288179 - 5288146 - g 72 -11.7 -3.25896 | overlap 5288144 5288150 TGACCATGGACAAGA CCAACCACCACCTGC ACAA GCCGGTGATGATCGG CGAGATTCAGGATGA Pput_4719 5287041 - 5288306 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 4146 5288388 - 5288357 - f 70 -10.2 -3.29043 | gap 1, opp_overlap 5288356 AACCCGCTCCTACAA GGACCGCGC-AGGTT TCA AACCTTGCACCGTCC CTGTGTAGGCGCGGG Pput_4720 5288480 - 5289934 + | inner-membrane translocator Pput_4721 5289934 - 5291013 + | inner-membrane translocator Pput_4722 5291010 - 5291867 + | ABC transporter related TERM 4147 5292473 - 5292442 - g 73 -13 -3.21099 | gap 1, opp_overlap 5292452 5292468 GGCGGCCAGCAGCAA CAGCTGGCCATCGGC CGC GCCC-TGGCCAGCCG CCCGCGCCTGCTGAT Pput_4723 5292022 - 5292720 + | ABC transporter related TERM 4148 5292804 - 5292765 - g 74 -10.6 -3.77196 | TCATGAGCTACGAAA TCCGCGATGCCCGGCCCA CCGA TGTGCCGGGCATACTGGA CATCTACAACGACGC Pput_4724 5292752 - 5293267 + | GCN5-related N-acetyltransferase Pput_4725 5293920 - 5293615 - | hypothetical protein Pput_4726 5294882 - 5293923 - | chaperone DnaJ domain-containing protein Pput_4727 5295047 - 5296318 + | molecular chaperone-like protein Pput_4728 5297681 - 5296674 - | hypothetical protein TERM 4149 5297730 - 5297685 - R 75 -13.2 -2.93747 | gap 1 AGTAAAGGTCATACA GCCTCGAC-GGCAGACAGCGG GAATG CCGCAGTCTGCCAGCCTTGGC GGCGCAGGCATAGGC Pput_4729 5298038 - 5297751 - | PsiF repeat-containing protein Pput_4730 5298890 - 5298102 - | AraC family transcriptional regulator TERM 4150 5298996 - 5298961 - H 70 -11.8 -2.5055 | gap 1, opp_overlap 5298960 5298982, overlap 5298958 5298956 CATTCGATAATACAG GCCTATCGAGGGCCTGC CTT GCAGGCCTTCG-CGGGC TCGCCCGCTCCCACA Pput_4731 5299115 - 5299996 + | hypothetical protein TERM 4151 5300010 - 5300060 + T 82 -13.3 -3.53012 | opp_overlap 5300003 5300042, overlap 5300007 5300011 GAGCTAAAGCCCCGC CGCCTTGAGCCGG-GCGGCATGTTC GGT GAACA-GCCGCACCGGCTCCGCGCC TTTGCCCACGGCCCC TERM 4152 5300011 - 5300059 + T 85 -16.8 -2.71712 | opp_overlap 5300003 5300042, overlap 5300007 5300010 AGCTAAAGCCCCGCC GCCTTGAGCCGG-GCGGCATGTTC GGT GAACA-GCCGCACCGGCTCCGCGC CTTTGCCCACGGCCC Pput_4732 5300888 - 5299998 - | alpha/beta hydrolase fold Pput_4733 5301011 - 5301352 + | DNA-binding transcriptional activator OsmE Pput_4734 5301396 - 5301926 + | Ferritin, Dps family protein TERM 4153 5301943 - 5301961 + T 95 -17.4 -3.45571 | overlap 5301937 TTCTGACACCCTCAT GGGGCCGC TTT GCGGCCCC TTGCTATTTCCGCGC Pput_4735 5304031 - 5301965 - | AsmA family protein Pput_4736 5304372 - 5304869 + | hypothetical protein TERM 4154 5304917 - 5304944 + F 100 -13.4 -5.71712 | overlap 5304921 AACGCTTGCTCCCCT CCAGGCCCGGTC CATT GACCGGGCTTTG TTTTTTTATCTAGAG TERM 4155 5304921 - 5304940 + F 100 -15 -5.29742 | overlap 5304917 CTTGCTCCCCTCCAG GCCCGGTC CATT GACCGGGC TTTGTTTTTTTATCT Pput_4737 5304959 - 5305627 + | TetR family transcriptional regulator Pput_4738 5305680 - 5306780 + | N-acylglucosamine 2-epimerase Pput_4739 5306875 - 5307123 + | hypothetical protein TERM 4156 5307134 - 5307167 + T 72 -10.9 -3.40141 | opp_overlap 5307124, overlap 5307136 5307137 ACTGAGCGATGCGTT GCTTCGCGAACCGGA TCGT TCCGGTTCGCGCCTC TTGCTTAGCCTTTTG TERM 4157 5307136 - 5307165 + T 77 -12.1 -3.25941 | opp_overlap 5307124, overlap 5307134 5307137 TGAGCGATGCGTTGC TTCGCGAACCGGA TCGT TCCGGTTCGCGCC TCTTGCTTAGCCTTT TERM 4158 5307137 - 5307164 + T 81 -15.6 -2.54841 | opp_overlap 5307124, overlap 5307136 5307134 GAGCGATGCGTTGCT TCGCGAACCGGA TCGT TCCGGTTCGCGC CTCTTGCTTAGCCTT Pput_4740 5307936 - 5307172 - | short-chain dehydrogenase/reductase SDR TERM 4159 5308375 - 5308326 - R 100 -12.3 -5.5353 | gap 1, opp_overlap 5308326 5308324, overlap 5308330 5308334 GATATGAACAAAAAA TGATCAAATCGCTACAGGCCTTGA TAC TCAAGGCCTTGAGCGATATG-CCA CCATGTTTTCCACAG TERM 4160 5308372 - 5308330 - R 85 -16.4 -2.69438 | opp_overlap 5308326 5308324, overlap 5308326 5308334 TGAACAAAAAATGAT CAAATCGCTACAGGCCTTGA TAC TCAAGGCCTTGAGCGATATG CCACCATGTTTTCCA TERM 4161 5308368 - 5308334 - R 100 -15.8 -3.98747 | opp_overlap 5308326 5308324, overlap 5308330 5308326 CAAAAAATGATCAAA TCGCTACAGGCCTTGA TAC TCAAGGCCTTGAGCGA TATGCCACCATGTTT TERM 4162 5308520 - 5308500 - R 79 -12.5 -3.39327 | overlap 5308501 TTTCCACATTGAGAA GGGGGCTGC ATT GCAGCCCCT GCATACAACTCAGTG TERM 4163 5308519 - 5308501 - R 82 -16 -2.63382 | overlap 5308500 TTCCACATTGAGAAG GGGGCTGC ATT GCAGCCCC TGCATACAACTCAGT Pput_4741 5309246 - 5308530 - | ABC transporter related Pput_4742 5310118 - 5309243 - | ABC transporter related Pput_4743 5311416 - 5310115 - | inner-membrane translocator TERM 4164 5310418 - 5310397 - G 71 -8.7 -3.91716 | gap 1, overlap 5310399 GTAGGTGGCAAAGAA CACC-CCGGC CAG GCCGGCGGTA GAGGCGCCAAGGGTA Pput_4744 5312333 - 5311419 - | inner-membrane translocator TERM 4165 5311919 - 5311969 + g 72 -14 -2.70528 | gap 1, overlap 5311915 ACCCGACTTCGACAC GC-ATGGCGCCTTCCAGCAGGGT TGGCAC GCCTTGCTGGCGGGCGCCCTGGC TGATCTGTGCGTAGT TERM 4166 5312448 - 5312484 + r 84 -10 -4.42156 | gap 1, opp_overlap 5312439 5312435 5312466, overlap 5312449 5312460 5312463 AAGACAGGTACCGCG GGGCTTG-GGCCCGAGC AACC GCCCGGGCCGCGGGCCG TTGTTATTTTTGTTT TERM 4167 5312449 - 5312483 + r 81 -13.5 -3.21633 | gap 1, opp_overlap 5312439 5312435 5312466, overlap 5312448 5312460 5312463 AGACAGGTACCGCGG GGCTTG-GGCCCGAGC AACC GCCCGGGCCGCGGGCC GTTGTTATTTTTGTT TERM 4168 5312460 - 5312490 + r 95 -7.5 -5.61881 | opp_overlap 5312439 5312435 5312466, overlap 5312449 5312448 5312463 GCGGGGCTTGGGCCC GAGCAACCGCCCG GGCCG CGGGCCGTTGTTA TTTTTGTTTTTCCAG TERM 4169 5312463 - 5312487 + r 100 -11.4 -4.855 | opp_overlap 5312439 5312435 5312466, overlap 5312449 5312448 5312460 GGGCTTGGGCCCGAG CAACCGCCCG GGCCG CGGGCCGTTG TTATTTTTGTTTTTC Pput_4745 5313624 - 5312488 - | extracellular ligand-binding receptor TERM 4170 5313733 - 5313757 + H 84 -5.6 -5.09762 | opp_overlap 5313722 AAAACACACTGTGCA GGGTGCCTGT AGGCG ACGGGCGGCC TTTTCTTTATTGAGC Pput_4746 5314137 - 5315342 + | nicotinate phosphoribosyltransferase nadE 5315346 - 5316173 + | NAD synthetase Pput_4748 5316736 - 5316284 - | azurin TERM 4171 5316869 - 5316883 + H 76 -7.1 -4.63932 | opp_overlap 5316860 5316869 ATACAACCAATCTAA GGGCA CATCA TGCCC TTTTATTAGACGATG Pput_4749 5317083 - 5317670 + | hypothetical protein Pput_4750 5320092 - 5317792 - | hypothetical protein TERM 4172 5320270 - 5320328 + r 100 -20.6 -3.01924 | gap 3, opp_overlap 5320266 5320265 5320289 TTCGACAGAATCCTT G---CAGCGCCTGTGAGATCAAGCGCCGC GCGG GCGGCGCTCGATCTCATAGGCGCTGAAAC TGTTGCGGCGAACTC TERM 4173 5320306 - 5320289 - R 83 -14.1 -3.25823 | opp_overlap 5320270, overlap 5320266 5320265 CGCCTGTGAGATCAA GCGCCGC GCGG GCGGCGC TCGATCTCATAGGCG Pput_4751 5320568 - 5320377 - | hypothetical protein TERM 4174 5321175 - 5321201 + H 93 -16.6 -3.53012 | opp_overlap 5321176, overlap 5321176 TTCTGTAAGTGACAA ACCAGAAGGGGC TTA GCCCCTTCTGGC TTTACCAAGGAGCAG TERM 4175 5321200 - 5321176 - H 100 -20.1 -3.97368 | opp_overlap 5321175 5321176 TCTGTAAGTGACAAA CCAGAAGGGGC TTA GCCCCTTCTGG CTTTACCAAGGAGCA TERM 4176 5321176 - 5321200 + H 100 -20.1 -2.71712 | opp_overlap 5321176, overlap 5321175 TCTGTAAGTGACAAA CCAGAAGGGGC TTA GCCCCTTCTGG CTTTACCAAGGAGCA TERM 4177 5322078 - 5322063 - g 77 -2.6 -4.96848 | gap 1 GGGGCCACAGAAAAA CA-AGAG GAT CTCTCTG CTGAAAAAATGCTTA Pput_4752 5321220 - 5322374 + | hypothetical protein Pput_4753 5322376 - 5324031 + | ABC transporter related Pput_4754 5325453 - 5324056 - | replicative DNA helicase TERM 4178 5324940 - 5324951 + g 70 -7.2 -4.07687 | opp_overlap 5324925 GCTCGTTGACGCCCA CCGG GCCG CCGG TTTTAGGCCGCGCCT TERM 4179 5325527 - 5325484 - R 100 -11 -4.77036 | gap 1, opp_overlap 5325488, overlap 5325490 CTGGAGGATGAAAAA GACAAAGGGCACGG-CCTGTC GAA AACAGGACCGTGCCCGATGTT AACCGCCTGACTCGC TERM 4180 5325521 - 5325490 - R 100 -17.4 -4.58297 | gap 1, opp_overlap 5325488, overlap 5325484 GATGAAAAAGACAAA GGGCACGG-CCTGTC GAA AACAGGACCGTGCCC GATGTTAACCGCCTG rplI 5326013 - 5325567 - | 50S ribosomal protein L9 TERM 4181 5325930 - 5325953 + g 74 -5.2 -4.61873 | opp_overlap 5325930 GAATGGCAGCAGGAA GTTACGGCCG TAAC CAGCCTTAAC TTTTACTTTGTCGCC Pput_4756 5326897 - 5326034 - | hypothetical protein TERM 4182 5326709 - 5326688 - G 73 -8.7 -4.02022 | CGCAATCACCAGAAA GGTGATGGG ATCG CCCATGACC CACACGGCCAGCCCG rpsR 5327161 - 5326931 - | 30S ribosomal protein S18 rpsF 5327615 - 5327190 - | 30S ribosomal protein S6 Pput_4759 5328651 - 5327905 - | RNA methyltransferase TERM 4183 5328611 - 5328632 + g 81 -4.3 -5.03314 | overlap 5328613 5328615 TGCTGCAGCAATGCC TGCACGGCG TGTA CGCCGTAGA TTTTTTCCAGCTGAC Pput_4760 5331221 - 5328648 - | ribonuclease R TERM 4184 5328754 - 5328782 + g 82 -2.9 -5.21709 | TCCGATTTGCTGCCA GCACTGCTGCGCG CGT CGGTCATCAGCGC TTTTTTCATCTCGCG TERM 4185 5328904 - 5328920 + g 76 -5.8 -4.56597 | gap 1 GCTTTCGCTTCGGTT GCCG-GC TGCT GCTCGGC TTTTTCGGCAACCGG TERM 4186 5329668 - 5329691 + g 74 -5.1 -4.57073 | overlap 5329670 GTGCAGGCTCAGACC CAGCTCGCC GAGGAA GGCGCGCAG TTTTTCCAGGCGCTC TERM 4187 5331783 - 5331764 - H 100 -12.2 -5.00895 | opp_overlap 5331764 GGCACCATACAAAAA CCCACTAG CTTG CTAGTGGG TTTTTTCTTGCCTGC TERM 4188 5331764 - 5331783 + H 100 -12.2 -5.4833 | opp_overlap 5331764 GGCACCATACAAAAA CCCACTAG CTTG CTAGTGGG TTTTTTCTTGCCTGC TERM 4189 5332852 - 5332808 - g 76 -9.2 -3.97051 | gap 1, overlap 5332844 AAACACCCGAAAGAA GCCCAGGCCCTGCTCAACTGG ATGG CCAG-CGAGGAAGGCCAGCGC GTGATCACCCAGACC Pput_4761 5332001 - 5333014 + | extracellular solute-binding protein TERM 4190 5333269 - 5333316 + G 72 -11.9 -3.30441 | gap 1, opp_overlap 5333301 TGCATGGTGGTCGGC CTGGC-ACTGGCCTGGCTGCTG GAGCG CAGCAACCTGGCCGGCCGCCGG TTGTGGGGCGTGGTG TERM 4191 5333991 - 5334015 + G 70 -9.9 -3.62616 | GTTGTTCACCTCGCT GTCGGTGTCGC TGG GCGGTGCCGGC TTCTGTGTGCTGCTG Pput_4762 5333014 - 5334579 + | binding-protein-dependent transport systems inner membrane component Pput_4763 5335131 - 5334664 - | hypothetical protein TERM 4192 5335225 - 5335209 - R 88 -15.1 -3.53012 | opp_overlap 5335204 CCTTGTGTCGCGAAA GGGCCGC ATA GCGGCCC CGGCAATTTCCGCGT TERM 4193 5335257 - 5335273 + r 82 -13.7 -3.53012 | opp_overlap 5335254 TATGCAACAAACCTG GGGCTGC TAT GCAGCCC TTTCGCGACACAAGG Pput_4764 5337250 - 5335316 - | methyl-accepting chemotaxis sensory transducer TERM 4194 5337569 - 5337542 - R 100 -20.6 -4.61873 | GCCCACAAATGAAAA CGCCGCGGCCCT TCTC AGGGCCACGGCG TCAGATCAGCCTGAA Pput_4765 5338884 - 5337592 - | adenylosuccinate synthetase hisZ 5340128 - 5338941 - | ATP phosphoribosyltransferase regulatory subunit TERM 4195 5339478 - 5339507 + g 73 -10.7 -3.54424 | gap 1 ACCACCGCACAGCTC GACCAGGGCGCGCA GCA TGC-TGCCCAGGTC TTTCGGCAGGTCGGC TERM 4196 5340333 - 5340316 - R 100 -12.7 -5.1287 | TGCAGACGCAAAAAA GCCGGGA AATT TCCCGGC TGCCTCATCATACAC Pput_4767 5341299 - 5340430 - | HflC protein Pput_4768 5342480 - 5341299 - | HflK protein TERM 4197 5342524 - 5342506 - R 95 -13.8 -4.14397 | ATCTGATAAAGCAAA GACGCGCC CAC GGCGCGCC GTCCAATGCTACAGA Pput_4769 5343878 - 5342577 - | GTP-binding protein, HSR1-related TERM 4198 5342749 - 5342730 - G 70 -7.8 -4.01381 | ACCCAAGGCAAAGAA TTGCGCGC GCAA GCGGGCAA AACGCTGCTCCAGGC hfq 5344151 - 5343891 - | RNA-binding protein Hfq miaA 5345217 - 5344246 - | tRNA delta(2)-isopentenylpyrophosphate transferase mutL 5347120 - 5345219 - | DNA mismatch repair protein TERM 4199 5345874 - 5345926 + g 70 -12 -3.23216 | gap 1, opp_overlap 5345867 TTATAGAACTCGCGG TACACCGCCTGTGCCTCTGCGGCCG GCAG CGGCTGT-GAGGGACGTGGGGTGTA TTGATACTGGTAACC TERM 4200 5346487 - 5346449 - G 70 -11.7 -3.14132 | gap 2, opp_overlap 5346473 TGCCTGCTCCATGAA GCCCGGGC-C-GCAGATGG CAC CCACCCGCCGTGCACGGGC GGTTTCGTCGTGGGC Pput_4773 5348547 - 5347117 - | N-acetylmuramoyl-L-alanine amidase TERM 4201 5348022 - 5348047 + g 70 -11.9 -3.14564 | gap 1, opp_overlap 5348013 CAACCACGATGTCAC GCTTGCCACTGG GTA CCGGTGGC-AGC TTGATCGCCGGCTGG Pput_4774 5349032 - 5348559 - | hypothetical protein Pput_4775 5349943 - 5349020 - | carbohydrate kinase, YjeF related protein Pput_4776 5349946 - 5351010 + | putative iron-sulfur cluster binding protein Pput_4777 5351762 - 5351151 - | hypothetical protein TERM 4202 5351822 - 5351846 + r 81 -12.9 -3.60098 | opp_overlap 5351821 5351820 5351822, overlap 5351823 CAAGGCACCAAAAGG GGGCGCAGATA CAA TATCTGCGCCG TTTCGACTCACAGCT TERM 4203 5351846 - 5351822 - R 72 -12.9 -2.50381 | opp_overlap 5351822 5351823, overlap 5351821 5351820 CAAGGCACCAAAAGG GGGCGCAGATA CAA TATCTGCGCCG TTTCGACTCACAGCT TERM 4204 5351823 - 5351845 + r 86 -16.4 -2.75844 | opp_overlap 5351822 5351821 5351820, overlap 5351822 AAGGCACCAAAAGGG GGCGCAGATA CAA TATCTGCGCC GTTTCGACTCACAGC Pput_4778 5352396 - 5351854 - | oligoribonuclease TERM 4205 5352625 - 5352598 - g 93 -7.6 -5.08824 | gap 1, overlap 5352599 5352602 GGCGGATCGAAAAAA TCCAGGGCGAGCG CGC CGCTCGCGC-GGC CAAACGCGAGCAGCA TERM 4206 5352624 - 5352599 - g 73 -11.1 -3.64812 | gap 1, overlap 5352598 5352602 GCGGATCGAAAAAAT CCAGGGCGAGCG CGC CGCTCGCGC-GG CCAAACGCGAGCAGC TERM 4207 5352622 - 5352602 - g 70 -12.5 -2.93182 | overlap 5352599 5352598 GATCGAAAAAATCCA GGGCGAGCG CGC CGCTCGCGC GGCCAAACGCGAGCA Pput_4779 5352549 - 5353580 + | ribosome-associated GTPase motB 5354928 - 5353888 - | flagellar motor protein MotB Pput_4781 5355783 - 5354932 - | flagellar motor protein MotA Pput_4782 5355914 - 5357449 + | metal-dependent hydrolase HDOD TERM 4208 5357997 - 5357954 - g 75 -12.4 -3.58343 | gap 1 GCGAGTACCTGCAAA GCCGCCTGGGCGCC-GATGAC CTG GTCATCTGGGACGCACGCGGC CCGCAGGAATTCAGC TERM 4209 5358047 - 5358022 - g 72 -3.9 -4.58395 | gap 1, overlap 5358023 TTCAGCGGCGAAAAA GTGCTGGCAGCC AAA GGCGGCCA-CAT CCCCGGCGCGATCAA Pput_4783 5357494 - 5358303 + | rhodanese domain-containing protein psd 5358313 - 5359176 + | phosphatidylserine decarboxylase TERM 4210 5359195 - 5359214 + T 100 -15 -4.8622 | opp_overlap 5359195 GAGCCATATGAGAAA GGCCCTGC ATAT GCAGGGCC TTTTTCGTTGGGCCG TERM 4211 5359214 - 5359195 - T 95 -15 -4.02334 | opp_overlap 5359195 GAGCCATATGAGAAA GGCCCTGC ATAT GCAGGGCC TTTTTCGTTGGGCCG Pput_4785 5360467 - 5359253 - | phosphoserine phosphatase SerB TERM 4212 5359410 - 5359428 + g 75 -14.6 -2.80994 | GGCAGGTCATTGGCA CCATCGCC CAC GGCGATGG TCTGCTCCAGTTGCA TERM 4213 5361031 - 5361014 - g 71 -5.6 -4.371 | TGTACCAGACCAAAA TCACGT TCCAGG ACGTGA CGGCCGGGCAGTTGC TERM 4214 5361356 - 5361325 - g 71 -9.4 -3.72324 | gap 1, overlap 5361327 GAGCCTGAGGAAGAA GACGACGAGCAGTTC GAC GACCTGCCCGCCG-C TGCCCCGGCACCCAA TERM 4215 5361355 - 5361327 - g 76 -13.1 -3.44284 | overlap 5361325 GCCTGAGGAAGAAGA CGACGAGCAGTTC GAC GACCTGCCCGCCG CTGCCCCGGCACCCA Pput_4786 5360602 - 5362059 + | hypothetical protein TERM 4216 5362466 - 5362409 - T 85 -15.8 -3.14211 | gap 1, opp_overlap 5362411 5362428, overlap 5362396 5362411 5362428 ACCCGCTCCTACGAA GACCGGC-AGATACAAAAAAGCCCGCA GCGAA TGCGGGCTTTGTCGTATCTGGCCGCTT GATCAGAACCGATAA TERM 4217 5362463 - 5362411 - T 95 -18.6 -3.13403 | opp_overlap 5362411 5362428, overlap 5362396 5362409 5362428 CCGCTCCTACGAAGA CCGGCAGATACAAAAAAGCCCGCA GCGAA TGCGGGCTTTGTCGTATCTGGCCG CTTGATCAGAACCGA TERM 4218 5362411 - 5362464 + T 85 -16.2 -3.14211 | gap 1, opp_overlap 5362396 5362409 5362411 5362428, overlap 5362428 CCGCTCCTACGAAGA CCGGC-AGATACAAAAAAGCCCGCA GCGAA TGCGGGCTTTGTCGTATCTGGCCGC TTGATCAGAACCGAT TERM 4219 5362446 - 5362428 - T 100 -11.7 -5.4251 | opp_overlap 5362411 5362428, overlap 5362411 5362409 GGCAGATACAAAAAA GCCCGCA GCGAA TGCGGGC TTTGTCGTATCTGGC TERM 4220 5362428 - 5362446 + T 86 -11.7 -4.04318 | opp_overlap 5362428 5362411 5362409, overlap 5362411 GGCAGATACAAAAAA GCCCGCA GCGAA TGCGGGC TTTGTCGTATCTGGC Pput_4787 5363224 - 5362469 - | hypothetical protein Pput_4788 5365610 - 5363352 - | DNA topoisomerase IV subunit A Pput_4789 5366139 - 5365621 - | hypothetical protein TERM 4221 5366116 - 5366060 - G 78 -2.9 -5.0133 | gap 3, overlap 5366074 5366077 CACTGGCCGAAAAAA CGCGTGGCAAGAAACAG-CG-CCGCCGC CCAA GCGACGATCATCAGCAACTTGCC-CGCG CGCTTGCCCGGCGCC Pput_4790 5367122 - 5366136 - | hypothetical protein Pput_4791 5369023 - 5367119 - | DNA topoisomerase IV subunit B Pput_4792 5369667 - 5369059 - | hypothetical protein TERM 4222 5369870 - 5369829 - R 100 -23.1 -3.49475 | opp_overlap 5369829 CCTATCGCGACACAA GGCCGCTCCCACAGGGG TACGCGAT CTCCTGTGGGAGCGGCC TTGTGTCGCGATAGG TERM 4223 5369829 - 5369870 + r 100 -25.3 -3.49475 | opp_overlap 5369829 CCTATCGCGACACAA GGCCGCTCCCACAGGGG TACGCGAT CTCCTGTGGGAGCGGCC TTGTGTCGCGATAGG Pput_4793 5370709 - 5369909 - | calcineurin phosphoesterase C-terminal domain-containing protein Pput_4794 5371241 - 5370795 - | hypothetical protein Pput_4795 5371855 - 5371238 - | NUDIX hydrolase TERM 4224 5372663 - 5372635 - g 86 -12.4 -4.15044 | overlap 5372636 TGGCCGTTCAAGAAA TCGCCGCACGTC GCCCT GACGTACGGCGC GGTAGTGGTCAAGTA TERM 4225 5372662 - 5372636 - g 81 -15.9 -3.08812 | overlap 5372635 GGCCGTTCAAGAAAT CGCCGCACGTC GCCCT GACGTACGGCG CGGTAGTGGTCAAGT Pput_4796 5372041 - 5372787 + | hypothetical protein Pput_4797 5374039 - 5372756 - | putative hydroxymethylpyrimidine transporter CytX TERM 4226 5372944 - 5372906 - G 95 -19.6 -3.17956 | overlap 5372894 AAACCAGGCCACCAA CGCCTGCCAGTGCAAGCC ATT GACCTGCGCTGGCAGACG GCGTCGACGGACCAC TERM 4227 5374165 - 5374107 - R 100 -24.8 -3.06183 | gap 1, opp_overlap 5374108 5374121, overlap 5374124 CGTATCGCGACGCAA GGCCGCTCCCACAAAAACCACGCAGGC TTCGAG GCTTGCGCGGTCCTTGTGGGAGCGGC- CTTGCGTCGCGAAAG TERM 4228 5374108 - 5374166 + r 100 -21.1 -3.05384 | gap 1, opp_overlap 5374107 5374124, overlap 5374121 GTATCGCGACGCAAG -GCCGCTCCCACAAAAACCACGCAGGCT TCGA GGCTTGCGCGGTCCTTGTGGGAGCGGCC TTGCGTCGCGAAAGG TERM 4229 5374149 - 5374124 - R 85 -8.2 -4.82901 | opp_overlap 5374121 5374108, overlap 5374107 CCGCTCCCACAAAAA CCACGCAGGC TTCGAG GCTTGCGCGG TCCTTGTGGGAGCGG TERM 4230 5374196 - 5374180 - R 88 -15.1 -3.53012 | opp_overlap 5374175, overlap 5374190 CCTTGCGTCGCGAAA GGGCCGC AAA GCGGCCC CAGCGTGCTTAGACT Pput_4798 5376085 - 5374205 - | thiamine biosynthesis protein ThiC Pput_4799 5376507 - 5377940 + | TolC family type I secretion outer membrane protein Pput_4800 5379326 - 5378055 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 4231 5378997 - 5378974 - G 81 -7.3 -4.44245 | ACATGATCGAGAAAA CGCCCCGCC GCCCAA GGCAGGTCG TAGGGCAGGTAGCAA TERM 4232 5379250 - 5379208 - G 70 -9.8 -3.57144 | overlap 5379213 GCCGGCAGCTTGAAA GCAAAGCGCTCGCCGATG CGCTGGC CATAGGCCGGCGCCTTGC GCGCGCGCAGGTATA TERM 4233 5379258 - 5379213 - G 100 -16.7 -4.06502 | gap 1, overlap 5379208 CAGCTTGAAAGCAAA GCGCTCGC-CGATGCGCTGGCC ATA GGCCGGCGCCTTGCGCGCGCGC AGGTATAGGCGCAGC Pput_4801 5380228 - 5379338 - | LysR family transcriptional regulator Pput_4802 5380315 - 5380647 + | small multidrug resistance protein Pput_4803 5380736 - 5381911 + | FAD dependent oxidoreductase Pput_4804 5381908 - 5382720 + | aldo/keto reductase Pput_4805 5382779 - 5383747 + | hypothetical protein Pput_4806 5385250 - 5383829 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4234 5384758 - 5384768 + g 76 -6.8 -4.39133 | CCTTGGCCCGCGCCG CCTG GAT CAGG TTTTGGTGGTTCTTC TERM 4235 5385369 - 5385349 - R 83 -14.7 -3.2964 | AAATTCCCGTGACAA TCGGGGCCA TAA CGGCCCCGA TCAAGGAGGGTTCAG Pput_4807 5387189 - 5385381 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Pput_4808 5388380 - 5387205 - | O-antigen polymerase TERM 4236 5388850 - 5388871 + G 84 -8.7 -4.44046 | gap 1, opp_overlap 5388844 CTGATCGAACTGATC CGCCAGTTGC ACC GCAGC-GGCG TTTATTTCCGCTCGC Pput_4809 5388412 - 5389086 + | hypothetical protein Pput_4810 5390181 - 5389090 - | glycosyl transferase, group 1 Pput_4811 5390992 - 5390219 - | hypothetical protein Pput_4812 5392014 - 5391058 - | hypothetical protein TERM 4237 5391190 - 5391177 - G 71 -9.5 -3.78087 | opp_overlap 5391176 5391175 AACTAAAACGGGAAA CCGCC AGAT GGCGG CCATTTTCTGCAATC Pput_4813 5393493 - 5392063 - | LmbE family protein Pput_4814 5394359 - 5393463 - | Mig-14 family protein TERM 4238 5393567 - 5393581 + gr 70 -11.4 -3.02144 | GCGCCCGGGCATCTT CCCAGG CGG CCTGGG TATTGAGGAAGCTCA Pput_4815 5395489 - 5394359 - | glycosyl transferase, group 1 Pput_4816 5397230 - 5395473 - | carbamoyltransferase Pput_4817 5398259 - 5397423 - | hypothetical protein TERM 4239 5397767 - 5397792 + g 79 -8.3 -4.25104 | gap 1 CGGCCTGTTCGAACG GCGGGTCGATCA GCA TGATCG-CGCGC TTTTCCTGCACCGGC TERM 4240 5398316 - 5398363 + r 74 -11.2 -3.29325 | gap 1, opp_overlap 5398341, overlap 5398314 5398317 GCGGAGTCAGGCCTG GCTGCTG-ATTGGCGGCACCCGC AAA GCAGGCGCCGCCAATTCAACGGG TGTTACTTGTCGGCG TERM 4241 5398317 - 5398362 + r 78 -14.7 -2.57274 | gap 1, opp_overlap 5398341, overlap 5398316 5398314 CGGAGTCAGGCCTGG CTGCTG-ATTGGCGGCACCCGC AAA GCAGGCGCCGCCAATTCAACGG GTGTTACTTGTCGGC Pput_4818 5399844 - 5398366 - | sodium/proline symporter TERM 4242 5399990 - 5400024 + H 75 -6.4 -4.60041 | opp_overlap 5399989 5399990, overlap 5399991 CATTTTCCGACAAAG CCCGTTTCTTGCTCCT TCC GGGAGCAAAAAACCGC TTTTTCAGAATAAAT TERM 4243 5403688 - 5403643 - g 88 -16.2 -3.25823 | gap 1, overlap 5403646 CTGGGCCGAGAGCAA CCAGCTGGCCGACCTGGCCGC GCTGT GCAGCCAGTTCG-CCAGCCAG TCGCAGAGCGGCATC TERM 4244 5403685 - 5403646 - g 81 -16.5 -2.81547 | gap 1, overlap 5403643 GGCCGAGAGCAACCA GCTGGCCGACCTGGCCGC GCTGT GCAGCCAGTTCG-CCAGC CAGTCGCAGAGCGGC putA 5400200 - 5404153 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 4245 5404178 - 5404195 + T 100 -11.3 -5.28176 | opp_overlap 5404178 GTTGTTGAAGAAGAA GGAGAGC CTCG GCTCTCC TTTTTTATGCGTGCA TERM 4246 5404195 - 5404178 - T 83 -11.3 -3.9461 | opp_overlap 5404178 GTTGTTGAAGAAGAA GGAGAGC CTCG GCTCTCC TTTTTTATGCGTGCA TERM 4247 5404588 - 5404575 - T 83 -3.8 -5.17353 | opp_overlap 5404575 AGACCTATCAAAAAA GCCT TGCAGC AGGC TTCTACCCAGCATCG Pput_4820 5405372 - 5404689 - | hypothetical protein Pput_4821 5405514 - 5407316 + | acyl-CoA dehydrogenase domain-containing protein TERM 4248 5407359 - 5407407 + G 72 -7.3 -4.21812 | gap 1, overlap 5407361 CCGCATGTTCGATTC CAGCGCCCTGCTGCGCCAGCGC TTTGCT GCGCT-GCGCAGTACGGCCGAG TTGTTTTCCCTGCGC TERM 4249 5407929 - 5407910 - g 71 -9.2 -3.727 | overlap 5407904 GCCAGGACAGCCAAA GCCGCAGC CTGG GCCGCGAC AACTTCGGCCAACAG Pput_4822 5407348 - 5408790 + | peptidase U62, modulator of DNA gyrase Pput_4823 5408790 - 5410109 + | hypothetical protein TERM 4250 5410178 - 5410139 - f 82 -13.6 -3.53012 | opp_overlap 5410139 CCTTTCGCGGCTAAA GCCGCGCCTACAAGGA ACGCGTAA CCCCTGTAGGAGCGGC TTTAGCCGCGAAAGG TERM 4251 5410139 - 5410178 + F 72 -10.7 -3.53012 | opp_overlap 5410139 CCTTTCGCGGCTAAA GCCGCGCCTACAAGG AACGCGTAAC CCCTGTAGGAGCGGC TTTAGCCGCGAAAGG TERM 4252 5411058 - 5411076 + GF 70 -10.2 -3.22223 | overlap 5411059 CCTGTTCGCCCGCCT GGGCAGCG GCG CGCTGCCG TTCCTGGTGCCGTTG TERM 4253 5411059 - 5411075 + GF 75 -13.7 -2.53012 | overlap 5411058 CTGTTCGCCCGCCTG GGCAGCG GCG CGCTGCC GTTCCTGGTGCCGTT Pput_4824 5410219 - 5411646 + | EmrB/QacA family drug resistance transporter TERM 4254 5412859 - 5412841 - gf 86 -8.1 -4.61231 | overlap 5412845 5412846 GGACAGCCTGAAAAA CAAGGGC GGCGA GCCCCTG CTGCCGGTGATGACC Pput_4825 5411612 - 5413096 + | ATP-dependent RNA helicase DbpA TERM 4255 5413566 - 5413536 - g 71 -9 -3.78934 | GTTCTGTGACAACAA GGCCAGCGACAT CCTCGAC ATGCTGCTGGCC GAGTGCGACGAGGCC Pput_4826 5413219 - 5414400 + | hypothetical protein TERM 4256 5416282 - 5416255 - g 85 -14.8 -3.62597 | opp_overlap 5416269, overlap 5416269 CCGACGGCTGAACAA GGCGCTGGCCAA TACC CTGGCCTGCGCC AGCGTTTACCTGCGC Pput_4827 5414612 - 5416795 + | YccS/YhfK family integral membrane protein Pput_4828 5417512 - 5416814 - | extracellular solute-binding protein TERM 4257 5418029 - 5418041 + G 85 -6.2 -4.9792 | GCGGAGCATTGTTGG CCGG GGGTG CCGG TTTTTCTGTCGGCTC Pput_4829 5417705 - 5418157 + | GCN5-related N-acetyltransferase Pput_4830 5418570 - 5418274 - | hypothetical protein Pput_4831 5419122 - 5418583 - | hypothetical protein Pput_4832 5421249 - 5419123 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4258 5421425 - 5421440 + r 93 -10.4 -4.62471 | opp_overlap 5421425 TCGCCCATAAAAAAA CCCGCA TCAC TGCGGG TTTTTCAGGGTTACC TERM 4259 5421440 - 5421425 - R 100 -10.4 -5.60993 | opp_overlap 5421425 TCGCCCATAAAAAAA CCCGCA TCAC TGCGGG TTTTTCAGGGTTACC Pput_4833 5422526 - 5421462 - | fructose-1,6-bisphosphate aldolase TERM 4260 5422542 - 5422553 + r 72 -5.8 -4.49556 | overlap 5422545 TGTGTATCTCTCTCC CGAC AAGC GTCG TTTGTTTCGTGCAAG Pput_4834 5422956 - 5422627 - | hypothetical protein TERM 4261 5422974 - 5422990 + r 78 -13.7 -3.14132 | AGTTTCCTCGATTTG GGGCTGC TGT GCAGCCC TTCCTCAAGACCACA Pput_4835 5423286 - 5423035 - | hypothetical protein pgk 5424449 - 5423286 - | phosphoglycerate kinase Pput_4837 5425523 - 5424462 - | D-erythrose-4-phosphate dehydrogenase TERM 4262 5425583 - 5425641 + r 100 -26 -3.06183 | opp_overlap 5425583, overlap 5425610 CCCATCGCGACGCAA GGCCGCTCCCACAGGGACCGCGCCATCC GGA GGACAGCACCGTTTCTGTGGGAGCGGCC TTGCGTCGCGATGGA TERM 4263 5425641 - 5425583 - R 100 -28.2 -3.06183 | opp_overlap 5425583 5425610 CCCATCGCGACGCAA GGCCGCTCCCACAGGGACCGCGCCATCC GGA GGACAGCACCGTTTCTGTGGGAGCGGCC TTGCGTCGCGATGGA TERM 4264 5425683 - 5425704 + r 90 -12.3 -4.2123 | opp_overlap 5425664 TCCCCTTGCACGACC TGGAGGGCG TCAC TGCCCTCCA TTTGTTACATCAGTC Pput_4838 5427711 - 5425714 - | transketolase TERM 4265 5426178 - 5426197 + g 76 -5.6 -4.56597 | opp_overlap 5426164 TCAGCGCCGATGGGC CGTCCTTG CGCT CCAGGGCG TTTTTCCAGGACACG TERM 4266 5427301 - 5427318 + g 82 -5.5 -4.82901 | overlap 5427287 5427304 GTGGCCGTCACGGTT GAACTGG GCAG CCAGTAC TTTTTCTGCCAGGGC TERM 4267 5427770 - 5427755 - H 70 -3.2 -4.72272 | TGGTGTCACGAAAAA GGCG GCCATTTT CGCC CACTGGGGGCGCTTG Pput_4839 5427963 - 5428955 + | ArsR family transcriptional regulator Pput_4840 5428974 - 5430164 + | S-adenosylmethionine synthetase TERM 4268 5430189 - 5430214 + F 100 -20.5 -5.29782 | opp_overlap 5430189 CAGCGCTGGACGAAA GCCCCTGCCGA GCGA TCGGCAGGGGC TTTTTTGTGCCTGTC TERM 4269 5430214 - 5430189 - f 100 -20.5 -3.72893 | opp_overlap 5430189 CAGCGCTGGACGAAA GCCCCTGCCGA GCGA TCGGCAGGGGC TTTTTTGTGCCTGTC TERM 4270 5430255 - 5430269 + F 80 -5.6 -5.00884 | CATCGCCTGTGAGAT CGAGCG CCG CGCTGG TTTTTTGCGCAACCT ligB 5430394 - 5432094 + | NAD-dependent DNA ligase LigB Pput_4842 5432227 - 5432619 + | hypothetical protein TERM 4271 5432738 - 5432718 - T 73 -12.5 -2.60496 | overlap 5432717 5432715 TTTTTGCTGAAATAC TGGGGCCGC TGA GCGGCCCTA TCGCGACACAAGGCC Pput_4843 5433266 - 5432808 - | cytochrome c, class II TERM 4272 5433373 - 5433342 - H 71 -4.3 -4.56961 | overlap 5433344 5433347 AATAGCCACATAAAA GACAGGGGCGAAC CTTCAT GTTCGCTCATGAC AGGAATGCACACATG TERM 4273 5433520 - 5433553 + G 84 -8.8 -4.42386 | opp_overlap 5433539 CACTTGGAAAGACTT GCCGGCCGTCAG CGATGAAGAC CTGCTGGCCGGC TTTTATGCATGGCGC TERM 4274 5433617 - 5433584 - g 74 -5.2 -4.57341 | gap 1, overlap 5433586 5433589 AACGGCTGCGAAAAA CTCAAGCG-CGACCC GGTGT GGGCCGCCACCTGCG AAGCGGCCGGCAGCG Pput_4844 5433359 - 5434537 + | MltA domain-containing protein TERM 4275 5434538 - 5434585 + T 95 -16.3 -3.59979 | gap 1, overlap 5434503 5434543 CCCAAGGTACCTTGA CCGTTGCTGCCTTCTTCGCGGG AGCCG CCCGCGAAGAAGGCCACT-CGG TTTCAGATGGAAACC TERM 4276 5434543 - 5434581 + T 91 -18.9 -2.65354 | overlap 5434503 5434538 GGTACCTTGACCGTT GCTGCCTTCTTCGCGGG AGCCG CCCGCGAAGAAGGCCAC TCGGTTTCAGATGGA Pput_4845 5434974 - 5434588 - | hypothetical protein Pput_4846 5435836 - 5435003 - | hypothetical protein Pput_4847 5436119 - 5437354 + | sodium/hydrogen exchanger TERM 4277 5437430 - 5437393 - T 100 -18.6 -3.53444 | CCATTCGCGGGTAAA CCCGCTCCTACAGG TTCGCGTACC CCTGTAGGAGCGGG TTCACCCGCGAAGAG Pput_4848 5437868 - 5437467 - | thioesterase superfamily protein Pput_4849 5438164 - 5439573 + | S-adenosyl-L-homocysteine hydrolase TERM 4278 5439666 - 5439691 + F 88 -10.4 -4.41895 | opp_overlap 5439659 TTGAACGACGCCCAA GCCAGACCGG CCATCA CCGATCTGGC TTTTACTTGCAGCTT TERM 4279 5439827 - 5439805 - g 89 -11.2 -4.25104 | overlap 5439787 5439786 CGCCGGTCACGAAAA GCTGATGGGC GTC GCCCGCCAGC TGGCCACCTATAACC Pput_4850 5439740 - 5440585 + | 5,10-methylenetetrahydrofolate reductase TERM 4280 5440614 - 5440650 + F 100 -16.1 -4.19238 | opp_overlap 5440614 AGTCTGCTTAAGAAA TGATTAAGGCTTTGGTC ATA GACTAAAGCCTTATTCA TTTTCGGGTTAAACA TERM 4281 5440650 - 5440614 - f 95 -13.9 -4.15222 | opp_overlap 5440614 AGTCTGCTTAAGAAA TGATTAAGGCTTTGGTC ATA GACTAAAGCCTTATTCA TTTTCGGGTTAAACA Pput_4851 5440679 - 5441755 + | hypothetical protein Pput_4852 5441925 - 5442713 + | extracellular solute-binding protein TERM 4282 5443486 - 5443496 + G 73 -6.8 -4.37092 | opp_overlap 5443459 CCTGCCGGCCAAGCG GCAG AAC CTGC TTTTCTCGGCCACCT TERM 4283 5444023 - 5444008 - g 73 -3.2 -4.76075 | overlap 5444009 5444010 ACCAGATGAAGAAAA GCTGCT CAAG AGCATC GAGCGGGTGACCAAG TERM 4284 5444148 - 5444128 - g 76 -8.9 -4.17048 | overlap 5444129 GCGCCCGCAAAACAA CGGCCGCGG TGG CCGCAACCA GCAAGCCCGCGGCGA Pput_4853 5442932 - 5444815 + | DEAD/DEAH box helicase domain-containing protein TERM 4285 5444857 - 5444905 + T 100 -27 -2.82516 | opp_overlap 5444857 5444860, overlap 5444860 AGCCCTATCACGACA CAAGGCCGCTCCTGCAGAGA TCAAGAAAT TCTCTGCGGGAGCGGCCTTG TGTCGTGATAGGGCC TERM 4286 5444905 - 5444857 - T 100 -24.8 -2.82635 | opp_overlap 5444857 5444860, overlap 5444860 AGCCCTATCACGACA CAAGGCCGCTCCTGCAGAGA TCAAGAAAT TCTCTGCGGGAGCGGCCTTG TGTCGTGATAGGGCC TERM 4287 5444860 - 5444902 + T 100 -22.9 -3.56273 | opp_overlap 5444857 5444860, overlap 5444857 CCTATCACGACACAA GGCCGCTCCTGCAGAGA TCAAGAAAT TCTCTGCGGGAGCGGCC TTGTGTCGTGATAGG TERM 4288 5444902 - 5444860 - T 100 -20.7 -3.56273 | opp_overlap 5444860 5444857, overlap 5444857 CCTATCACGACACAA GGCCGCTCCTGCAGAGA TCAAGAAAT TCTCTGCGGGAGCGGCC TTGTGTCGTGATAGG Pput_4854 5445534 - 5444956 - | hypothetical protein TERM 4289 5444991 - 5445021 + g 71 -9.6 -3.72893 | CAACACTGATATCCA GGTCCAGGGTCTGC GAA GTAGCGCCTGGGCC TTTGATGCCGAAGTC Pput_4855 5446118 - 5445567 - | cytochrome B561 Pput_4856 5448177 - 5446318 - | amine oxidase TERM 4290 5447118 - 5447104 - G 76 -11.4 -3.72576 | opp_overlap 5447104 CTGCTTTTCACCAAA CGCCTG CAG CAGGCG AGCGTTATCGCCGGA Pput_4857 5448225 - 5448878 + | hypothetical protein TERM 4291 5450031 - 5450004 - g 70 -9.8 -3.65522 | opp_overlap 5450016, overlap 5449986 GATCGAGGCCAACAA GGCCCTGGCCAC GCGC ATGGCCACAGCC ACTGCACATTTGGCC TERM 4292 5450134 - 5450115 - g 70 -10 -3.66556 | AATGGTTCAAGACAA GGCAGGCA AGGT TGCCTACC CCTGGCAGGAGCGCC Pput_4858 5448958 - 5450364 + | adenosylmethionine--8-amino-7-oxononanoate transaminase Pput_4859 5450513 - 5451232 + | hypothetical protein Pput_4860 5451850 - 5451233 - | hemolysin III family channel protein TERM 4293 5451374 - 5451346 - G 70 -13.1 -2.85813 | overlap 5451343 5451341 5451364 AGGCGAAGAAGATGA TGCCGACGGTGTA GAA CACGCCGCCGGCA GCCAGCCAGGCGAAG Pput_4861 5452531 - 5452058 - | CheW domain-containing protein Pput_4862 5457464 - 5452524 - | CheA signal transduction histidine kinase TERM 4294 5455776 - 5455727 - G 86 -7.3 -4.72272 | gap 3, overlap 5455729 CCTCGGTACGAAAAA TGC-CCAGCAACTGC-GG-ATCGA GGCCA TCGACACCGGCAGCCGCCGGGGCA TCGTTTTCGGCCAGG TERM 4295 5456493 - 5456462 - G 71 -13 -3.02144 | GGATCTGCTGCAACA GCCCCGGCAAGG GTTGCAGG CGTTGCCGGGGC CAGTCGGACTCCAGG Pput_4863 5459537 - 5457477 - | methyl-accepting chemotaxis sensory transducer TERM 4296 5457775 - 5457803 + g 71 -11 -3.43071 | overlap 5457767 CCACGCACCACTTCG GCGGTGGTCTGC TCCAT GGAGATCACCGC TTCGTTGGTATCGGC TERM 4297 5458144 - 5458160 + g 70 -12.3 -3.15544 | opp_overlap 5458141 ATGGCCACCGAACGC TCGGCCA CCT TGGCCGA TTCGTAAGCATGCGC Pput_4864 5460103 - 5459549 - | putative CheW protein TERM 4298 5459657 - 5459631 - G 72 -7.2 -4.11216 | overlap 5459633 CGTTCACGCGGAAAA TACCCCTGCACA AAG CGCGCAGCGGCA AGGATCAGAGGCTGC Pput_4865 5460465 - 5460100 - | response regulator receiver protein Pput_4866 5460914 - 5460513 - | response regulator receiver protein TERM 4299 5461005 - 5461028 + H 73 -5.4 -4.57569 | gap 1 TCTTTTCTTGAGGCT TGTAGCT-CAA GGC TTGCAGCTGCA TTTTTAGCACACTCC Pput_4867 5461153 - 5462106 + | glutathione synthetase Pput_4868 5462198 - 5463103 + | TonB family protein Pput_4869 5463268 - 5463837 + | hypothetical protein Pput_4870 5463837 - 5464262 + | Holliday junction resolvase-like protein Pput_4871 5464312 - 5464830 + | pyrimidine regulatory protein PyrR pyrB 5464843 - 5465847 + | aspartate carbamoyltransferase catalytic subunit pyrC 5465844 - 5467115 + | dihydroorotase TERM 4300 5467203 - 5467160 - f 100 -20.4 -3.55071 | gap 1, opp_overlap 5467144 5467197 CGATAGGGCCGCAAA GCGGCCCCAGCGATCTATGCA TGA TGCCGAGATC-CTGGGGCCGC TGCGCGGCCCTTTCG TERM 4301 5467197 - 5467213 + F 88 -15.1 -3.53012 | opp_overlap 5467160 GATGCCGAGATCCTG GGGCCGC TGC GCGGCCC TTTCGCGACGCAAGG TERM 4302 5467433 - 5467390 - f 100 -20.4 -3.55071 | gap 1, opp_overlap 5467374 5467427 CGATAGGGCCGCAAA GCGGCCCCAGCGATCTATGCA TGA TGCCGAGATC-CTGGGGCCGC TGCGCGGCCCTTTCG TERM 4303 5467427 - 5467443 + F 88 -15.1 -3.53012 | opp_overlap 5467390 GATGCCGAGATCCTG GGGCCGC TGC GCGGCCC TTTCGCGACGCAAGG TERM 4304 5467805 - 5467788 - g 83 -7.7 -4.59773 | overlap 5467790 GGTCAGCTGGAAAAA CACCAGG GCCA CCTGGTA CGCGCCGCCGTCGAG TERM 4305 5467803 - 5467790 - g 71 -8.1 -3.91506 | overlap 5467788 TCAGCTGGAAAAACA CCAGG GCCA CCTGG TACGCGCCGCCGTCG Pput_4874 5467539 - 5468117 + | ATP-dependent protease peptidase subunit TERM 4306 5468133 - 5468153 + F 91 -12.6 -4.09864 | TTCAGCTGTTCTGGC GCCCCTTC CCGGT GAAGGGGC TTTTCCACGCTGACT hslU 5468194 - 5469537 + | ATP-dependent protease ATP-binding subunit Pput_4876 5469626 - 5470081 + | hypothetical protein Pput_4877 5470350 - 5472029 + | poly(R)-hydroxyalkanoic acid synthase, class II TERM 4307 5472037 - 5472066 + G 100 -17.1 -3.90112 | AGCGTTGAGTTACAG CGCCGTGGCGGCC TGCG GGGCGCCACGGTG TTTACTTCACCCAAG Pput_4878 5472026 - 5472943 + | poly(3-hydroxyalkanoate) depolymerase Pput_4879 5472993 - 5474675 + | poly(R)-hydroxyalkanoic acid synthase, class II Pput_4880 5474688 - 5475302 + | TetR family transcriptional regulator TERM 4308 5475386 - 5475348 - T 79 -13.2 -3.53444 | opp_overlap 5475348 GCATTCGCGGGTAAA CCCGCTCCTACAAGGT TTGGCGC ATCTTGTGGGAGCGGG TTTACCCGCGAAGAA TERM 4309 5475348 - 5475386 + T 95 -17.6 -3.53012 | opp_overlap 5475348 GCATTCGCGGGTAAA CCCGCTCCTACAAGGT TTGGCGC ATCTTGTGGGAGCGGG TTTACCCGCGAAGAA Pput_4881 5476199 - 5475414 - | poly(hydroxyalkanoate) granule-associated protein TERM 4310 5475504 - 5475555 + g 70 -10.1 -3.61517 | gap 3, overlap 5475494 5475505 GGTCGCAGCAGGCGC AGCGCTGGCC-G-CTGG-GGCCGCCG GCT TGGCGGCTGCCGGTTTGGCCGGCGCC TTCTTCACCGCAGGT TERM 4311 5475505 - 5475554 + g 72 -13.6 -2.76696 | gap 3, overlap 5475494 5475504 GTCGCAGCAGGCGCA GCGCTGGCC-G-CTGG-GGCCGCCG GCT TGGCGGCTGCCGGTTTGGCCGGCGC CTTCTTCACCGCAGG Pput_4882 5476629 - 5476210 - | poly(hydroxyalkanoate) granule-associated protein Pput_4883 5476809 - 5481569 + | hypothetical protein Pput_4884 5481917 - 5481588 - | putative polyhydroxyalkanoic acid system protein ubiE 5481988 - 5482758 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4312 5483037 - 5483078 + G 100 -24.5 -3.14468 | opp_overlap 5483018 5483017 5483015 GTACTGCACAGCCCG CAGGTCGAGCTGCACGGCG ACAG CGCCGTACTGCTCGACCTG TTCGGTGTGCTGCAG Pput_4886 5482758 - 5483381 + | hypothetical protein Pput_4887 5483378 - 5485000 + | 2-polyprenylphenol 6-hydroxylase TERM 4313 5485021 - 5485000 - f 70 -11.5 -3.01924 | GATCGTGCGCCAATA GCCAGCCGC GCCT GTGGCTGGC ACACTAGCGCAAAGG hisI 5485073 - 5485465 + | phosphoribosyl-AMP cyclohydrolase hisE 5485467 - 5485802 + | phosphoribosyl-ATP pyrophosphatase TERM 4314 5486002 - 5485968 - g 71 -10.7 -3.50119 | gap 1, overlap 5485966 5485975 CATGAACGAAGAAGA GAGCAAGCCGGCCGAG CAGA CTCCGCC-GCCTGCCC AACCTGTGCCACCGG tatA 5485828 - 5486100 + | twin argininte translocase protein A tatB 5486104 - 5486481 + | sec-independent translocase Pput_4892 5486478 - 5487266 + | Sec-independent protein translocase, TatC subunit TERM 4315 5487674 - 5487652 - g 70 -7.6 -4.10161 | overlap 5487673 GAGCATTCGCGAAAA CCTGATCCTG GGC CTGGAACAGG CACGCGACACCGTGC Pput_4893 5487263 - 5487970 + | hypothetical protein Pput_4894 5488072 - 5489988 + | methyl-accepting chemotaxis sensory transducer TERM 4316 5490070 - 5490031 - f 78 -12.3 -3.53012 | gap 2 CTCTTCGCGGGTAAA CCCGCTCCTAC-AC-GCAT GCAC AGGCCGTCGTAGGAGCGGG TTCACCCGCGAATGG TERM 4317 5490314 - 5490275 - f 78 -12.3 -3.53444 | gap 2 GTATTCGCGGGTAAA CCCGCTCCTAC-AC-GCAT GCAC AGGCCGTCGTAGGAGCGGG TTCACCCGCGAATGG TERM 4318 5490436 - 5490397 - f 78 -12.3 -3.53444 | gap 2 GTATTCGCGGGTAAA CCCGCTCCTAC-AC-GCAT GCAC AGGCCGTCGTAGGAGCGGG TTCACCCGCGAATGG Pput_4895 5490448 - 5492667 + | methyl-accepting chemotaxis sensory transducer Pput_4896 5493511 - 5492777 - | ABC transporter related Pput_4897 5494466 - 5493504 - | polar amino acid ABC transporter, inner membrane subunit TERM 4319 5494433 - 5494448 + g 71 -4.6 -4.53047 | opp_overlap 5494428, overlap 5494428 GGGCAGTCAACCCAT GCCAAG GCCA CTGGGC TTTCTTGTGTTTGAT Pput_4898 5495346 - 5494546 - | extracellular solute-binding protein TERM 4320 5494729 - 5494740 + g 70 -7.2 -4.03234 | opp_overlap 5494720 GAGGAACAGCAGCTT GCCG GCGC CGGC TTTCTCTACCGCCAC Pput_4899 5498257 - 5495684 - | glucosyltransferase MdoH mdoG 5499989 - 5498250 - | glucan biosynthesis protein G TERM 4321 5499729 - 5499741 + g 71 -6.2 -4.25104 | overlap 5499739 5499740 CGGGGTCTTGTCCTT GGCC CACTC GGCC TTTTCCTGCAGGAAA TERM 4322 5500146 - 5500125 - R 71 -8.7 -3.71873 | overlap 5500126 CGAGTCAGAGTGAAA CGGACCTAC GAAC GCAGGTCCA TGCAGCGCGCGATTA TERM 4323 5500217 - 5500242 + r 79 -4 -5.06451 | opp_overlap 5500217, overlap 5500241 ATTTATCGTACAAAA CCCCTTGTTT TCCTGT GAACAAAGGG TTTTTTGACCTCATA TERM 4324 5500242 - 5500217 - R 70 -5.5 -4.40358 | opp_overlap 5500217 5500241 ATTTATCGTACAAAA CCCCTTGTT TTCCTGTG AACAAAGGG TTTTTTGACCTCATA Pput_4901 5500690 - 5500253 - | D-tyrosyl-tRNA deacylase Pput_4902 5501658 - 5500687 - | proline iminopeptidase Pput_4903 5502631 - 5501828 - | N-formylglutamate amidohydrolase Pput_4904 5503847 - 5502642 - | imidazolonepropionase Pput_4905 5505266 - 5503863 - | amino acid permease-associated region TERM 4325 5505019 - 5505004 - G 71 -8.2 -3.84961 | overlap 5505005 CAGCCAAGGATGAAA CCGGCC ATGG GGCCGA GGTAGGTCGTGGCGT Pput_4906 5506956 - 5505424 - | histidine ammonia-lyase TERM 4326 5506977 - 5507013 + r 100 -14.4 -4.10566 | gap 1, opp_overlap 5506972 TACTCCAAATCGCGT GGAGC-CGCAGGCCCGC TTGT GGGTGCCTGCGCGCTCC TTCTTGTTGTTCAGT Pput_4907 5508738 - 5507065 - | urocanate hydratase TERM 4327 5508947 - 5508922 - R 100 -20.5 -3.85698 | GCGGCGGCGCATAAA TCGAGCGCCGC GCGG GCGGCGCTCGA TCTCACAGGCGATGA Pput_4908 5509554 - 5508982 - | hypothetical protein TERM 4328 5509334 - 5509309 - G 70 -11.9 -3.1886 | gap 1 ATCGAACGCCAGCAA TGGCCGACTGGC CTG GCC-GTCGACCA GCAGGCGCATGCCGT Pput_4909 5510297 - 5509551 - | GntR family transcriptional regulator Pput_4910 5510406 - 5511770 + | N-formimino-L-glutamate deiminase Pput_4911 5512498 - 5511926 - | Lipocalin family protein Pput_4912 5512749 - 5512495 - | hypothetical protein TERM 4329 5512939 - 5512917 - R 100 -18.4 -5.4505 | opp_overlap 5512917 GCGCCCAATAAAAAA GGCCGCCCCC AAT GGGAGCGGCC TTGCGTCGCGATGCC TERM 4330 5512917 - 5512939 + r 85 -16.2 -3.06183 | opp_overlap 5512917 GCGCCCAATAAAAAA GGCCGCCCCC AAT GGGAGCGGCC TTGCGTCGCGATGCC Pput_4913 5513573 - 5512977 - | hypothetical protein Pput_4914 5514587 - 5513577 - | fructose-1,6-bisphosphatase TERM 4331 5514639 - 5514621 - R 76 -5.2 -4.72272 | opp_overlap 5514606 5514605, overlap 5514605 5514622 TGGGGGGATGAAAAA CCCCCGCA GTT TACAGGGA GAGTGACGGGCTAGC TERM 4332 5514754 - 5514792 + r 100 -19 -3.53012 | opp_overlap 5514775 CCATTCGCGGACGCG CCCGCGCCTACAGG TGGATAAGGGC CCTGTAGGCGCGGG TTTACCCGCGAACAA Pput_4915 5517275 - 5514825 - | glycogen/starch/alpha-glucan phosphorylase Pput_4916 5517460 - 5517864 + | hypothetical protein TERM 4333 5517910 - 5517885 - T 91 -14.7 -3.85698 | opp_overlap 5517885 GCGCCGGGGCATAAA TCGAGTGCCGC GCGG GCGGCGCTCGA TTCTGTGGCGATGCC TERM 4334 5517885 - 5517910 + T 93 -16.9 -3.49475 | opp_overlap 5517885 GCGCCGGGGCATAAA TCGAGTGCCGC GCGG GCGGCGCTCGA TTCTGTGGCGATGCC Pput_4917 5519384 - 5517963 - | PhoPQ-activated pathogenicity-related protein-like protein TERM 4335 5519560 - 5519510 - R 100 -22.1 -3.29511 | gap 1, opp_overlap 5519522, overlap 5519516 5519522 TGGAGCTTTCCACAA GGC-AAACAAAAACGCCCCCGGCC TTTC GACCGGGGGCGTTTTCATTCAGCC TGAGCTAACTCAGTT TERM 4336 5519553 - 5519516 - R 100 -20.7 -3.80625 | opp_overlap 5519522, overlap 5519510 5519522 TTTCCACAAGGCAAA CAAAAACGCCCCCGGCC TTTC GACCGGGGGCGTTTTCA TTCAGCCTGAGCTAA TERM 4337 5519547 - 5519522 - R 100 -19.7 -5.33026 | opp_overlap 5519522, overlap 5519516 5519510 CAAGGCAAACAAAAA CGCCCCCGGCC TTTC GACCGGGGGCG TTTTCATTCAGCCTG TERM 4338 5519522 - 5519547 + r 100 -17.5 -4.41494 | opp_overlap 5519522 5519516 5519510 CAAGGCAAACAAAAA CGCCCCCGGCC TTTC GACCGGGGGCG TTTTCATTCAGCCTG Pput_4918 5521390 - 5519570 - | GTP-binding protein TypA Pput_4919 5522973 - 5521519 - | thiamine biosynthesis protein ThiI TERM 4339 5521609 - 5521651 + g 76 -13.4 -3.16564 | opp_overlap 5521609 5521611, overlap 5521615 ACCCTTGTCGCAATA CAGCAAGTACTGGCGCGTGG GGT CCAGGTGCTTGAACTTGCTG TTGATGGCGTAGAAC TERM 4340 5523142 - 5523125 - H 72 -10.5 -3.53012 | opp_overlap 5523125 CCTTTCGCGGGTAAA CCCGCCC GTAG GAGCGGG TTTACCCGCGAAGAG Pput_4920 5523424 - 5524830 + | glutamine synthetase, type I TERM 4341 5524886 - 5524867 - f 88 -15 -3.46117 | opp_overlap 5524867 ATGACATGATCACAA CGGCCTCC CTCG GGAGGCCG TTTTTGTTTTCATAC TERM 4342 5524867 - 5524886 + F 100 -15 -5.50723 | opp_overlap 5524867 ATGACATGATCACAA CGGCCTCC CTCG GGAGGCCG TTTTTGTTTTCATAC Pput_4921 5524979 - 5525521 + | chorismate mutase, putative TERM 4343 5525924 - 5525898 - g 76 -10.2 -3.85817 | gap 1, overlap 5525885 5525884 ACCCGGCCGCAGAAA TGCTGCTGGCC GTCAGT GGCCAGC-GCA GCCATGGGCAATTCA Pput_4922 5525789 - 5526874 + | signal transduction histidine kinase, nitrogen specific, NtrB Pput_4923 5526871 - 5528307 + | nitrogen metabolism transcriptional regulator NtrC TERM 4344 5528421 - 5528364 - Tf 100 -36.5 -3.49475 | opp_overlap 5528364 CCCATCGCGACACAA GGCCGCTCCCACAGGATCACCTCTGCC CCCT GGCTGATGCGATCCTGTGGGAGCGGCC TTGTGTCGCGATGGG TERM 4345 5528364 - 5528421 + TF 100 -34.3 -3.49475 | opp_overlap 5528364 CCCATCGCGACACAA GGCCGCTCCCACAGGATCACCTCTGCC CCCT GGCTGATGCGATCCTGTGGGAGCGGCC TTGTGTCGCGATGGG Pput_4924 5529204 - 5528767 - | hypothetical protein TERM 4346 5529347 - 5529328 - gR 70 -10 -3.42574 | gap 1 CGAACTGGATGACAA GCGCCTGCG CCG CGCAGG-GC TGGACTACCACGAGT Pput_4925 5529203 - 5529664 + | RNA methyltransferase TERM 4347 5529769 - 5529723 - TR 88 -15.1 -3.49475 | gap 1, opp_overlap 5529734 5529765, overlap 5529699 CGCAGGCCGAGAGAA CGGCGCAATCCCCTGTAGCGGG TTTA CCCGCGA-AGAGGCCCGCGCCG GCAACAAAAAAGCGC TERM 4348 5529765 - 5529813 + Tr 74 -12.5 -2.78018 | gap 1, opp_overlap 5529723 5529781, overlap 5529781 CCGCGAAGAGGCCCG C-GCCGGCAACAAAAAAGCGCC CCGAGA GGCGCTTTCTTGATACCGGCAG TAATTACTGCACAGT TERM 4349 5529796 - 5529781 - TR 95 -8.2 -5.4505 | opp_overlap 5529765 5529781 GCCGGCAACAAAAAA GCGCCC CGAG AGGCGC TTTCTTGATACCGGC TERM 4350 5529781 - 5529796 + Tr 74 -7.5 -4.24342 | opp_overlap 5529781, overlap 5529765 GCCGGCAACAAAAAA GCGCC CCGAGA GGCGC TTTCTTGATACCGGC Pput_4926 5530302 - 5529817 - | preprotein translocase subunit SecB Pput_4927 5530596 - 5530342 - | glutaredoxin 3 Pput_4928 5531011 - 5530598 - | rhodanese domain-containing protein Pput_4929 5531219 - 5532754 + | phosphoglyceromutase TERM 4351 5532782 - 5532764 - f 91 -16 -3.60792 | opp_overlap 5532756 GCCTGAATGTCGAAA GGGGCTGC GTT GCAGCCCC AATTGCACATGAATT TERM 4352 5532832 - 5532807 - f 91 -12.5 -4.06491 | opp_overlap 5532807 TGAATTCCAGACAAA CGCCCCTCTGC ATCC GCAGCGAGGCG TTTTTTTTGCCTGCC TERM 4353 5532807 - 5532832 + F 100 -10.3 -5.81412 | opp_overlap 5532807 TGAATTCCAGACAAA CGCCCCTCTGC ATCC GCAGCGAGGCG TTTTTTTTGCCTGCC TERM 4354 5533714 - 5533675 - g 93 -7.7 -4.99861 | gap 1, overlap 5533676 5533677 5533690 5533691 CAGGAAGCAGAAAAA CGCCGCCAGCAGGAAGCG CTGGC CGCCGCC-GCTGCCCGCG ACCGGGCCCGTGAGC TERM 4355 5533778 - 5533758 - g 78 -6.8 -4.59853 | opp_overlap 5533769 GGAACCGCCGAAAAA GGCCCG CACCACCCT CGGGCC GATGGTTTCCAGCGA Pput_4930 5532895 - 5534211 + | peptidase M23B TERM 4356 5534273 - 5534257 - f 74 -7.2 -4.19953 | overlap 5534268 CAGGCAAGGCGAAAA CAGCCG AGGAA CGGCCG GGGTCGCGCCCGACT Pput_4931 5534446 - 5535762 + | carboxyl-terminal protease Pput_4932 5535771 - 5536538 + | protein of unknown function DUF610, YibQ Pput_4933 5541170 - 5536578 - | hypothetical protein TERM 4357 5540331 - 5540313 - G 77 -2.3 -5.03145 | gap 1, overlap 5540316 GAACTCGGCAAAAAA GGAC-GCG GGGT CGCAGGCC AAATGGCAGTAATGC TERM 4358 5541261 - 5541308 + r 74 -11.3 -3.33162 | CGCGTGAGTGGCGGG CATGACCAGGACTCGTTGTGG AATGAA CCACAAAGCGTCCTGGAGATG TTATCGAATGAGGTG Pput_4934 5543384 - 5541381 - | choline/carnitine/betaine transporter TERM 4359 5542597 - 5542608 + g 70 -7.2 -4.07687 | opp_overlap 5542563, overlap 5542595 TTCAGGTTGGACAGG CGGC GAAT GCCG TTTTCCACACCCGAT TERM 4360 5542829 - 5542869 + g 74 -13.1 -3.31144 | opp_overlap 5542822 TGACCCAACGCTCGC CCACCAGCGGGTACAGCGC CGA GCGCAGTGCCAGCGGCTGG TTGTGGCGGTAGGCA TERM 4361 5543538 - 5543521 - H 75 -6.3 -4.57837 | gap 1, overlap 5543525 5543527 ATACGTTGCCAAAAA CAGACAGG TGG CCTG-CTG AAAATGCCACGCCTC TERM 4362 5544521 - 5544481 - g 70 -10.4 -3.61715 | overlap 5544465 CAGGCCGCTGAACAA GCGCG-CACGGCACTTGCCA ACC CGGCAGGAG-CGTGACGCGC AAGCCAAACCACACA Pput_4935 5543860 - 5544516 + | transcriptional regulator BetI Pput_4936 5544556 - 5546028 + | betaine aldehyde dehydrogenase Pput_4937 5546106 - 5547803 + | choline dehydrogenase TERM 4363 5547815 - 5547833 + T 100 -17.4 -3.64599 | CTGAGGCCTTGATCA GGGGCCGC TCA GCGGCCCC TTTCACGTGTGCTCA Pput_4938 5549996 - 5547846 - | hypothetical protein TERM 4364 5551491 - 5551480 - g 71 -5.8 -4.27316 | TGCGCGAACTGAAAA TGCC CGAA GGCA CACGGATTGCCGCGC Pput_4939 5550174 - 5551916 + | potassium/proton antiporter TERM 4365 5552191 - 5552171 - g 73 -3.3 -4.80487 | gap 1, overlap 5552185 5552188 GACAACGAAAAGAAA CTGGCTGC ACTCAA GCAG-CAG CTGAGCAGCGCCCCC TERM 4366 5553979 - 5554021 + G 73 -13.3 -3.16191 | CACCTCGCTGTTCCG CAGGGCGGTGGGGGTAGCG TTCAC CGCCCTGCCCATCGCCCTG TTCGTCGCCGTGTGC Pput_4940 5551952 - 5555260 + | potassium efflux protein KefA TERM 4367 5555364 - 5555326 - f 85 -14.4 -3.53012 | TCGTTCGCGGGTAAA CCCGCTCCTACATCGGGC GCT GGCCGCTGTGGGGGCGGG TTCACCCGCGAGGGG TERM 4368 5555479 - 5555456 - g 71 -13.8 -2.57931 | opp_overlap 5555456, overlap 5555455 CTCACCTTCGACAAC CGCTTCGCCC GCCT GGGCGATGCG TTCTCCACCCAGGTG TERM 4369 5555456 - 5555479 + G 77 -13.8 -3.28924 | opp_overlap 5555456 5555455 CTCACCTTCGACAAC CGCTTCGCCC GCCT GGGCGATGCG TTCTCCACCCAGGTG TERM 4370 5555806 - 5555762 - g 73 -11.5 -3.64103 | gap 3 GACCTACACCTCAAA GGCGCCGGCCAGACACCC-TAC TCCC GCATGGGTGAC-GGCCG-CGCC GTGCTGCGCTCGTCG TERM 4371 5555946 - 5555970 + G 71 -9.2 -3.74224 | opp_overlap 5555931 GCGCGGCCATGCTGA CGCGCCTGGC GCAGA GCCACGTGCG TTTCGGTCATTTCGA Pput_4941 5555423 - 5556883 + | hypothetical protein Pput_4942 5557014 - 5557448 + | thioredoxin Pput_4943 5558218 - 5557445 - | cobyrinic acid a,c-diamide synthase TERM 4372 5558059 - 5558081 + g 75 -13.4 -3.09803 | TGCCCATGGGGATGT CCTCGCCGGT CAG GCCGGTGAGG TATTGGGTCGAGTTC Pput_4944 5559194 - 5558295 - | LysR family transcriptional regulator Pput_4945 5559303 - 5560547 + | major facilitator transporter Pput_4946 5560962 - 5560615 - | hypothetical protein TERM 4373 5561059 - 5561041 - R 100 -9.5 -5.13343 | opp_overlap 5561041 TAATGCAAAATAAAA GCCCGGC ACATG ACCGGGC TTATGGTTTCCGCGT hemE 5562145 - 5561081 - | uroporphyrinogen decarboxylase gltD 5563758 - 5562340 - | glutamate synthase subunit beta TERM 4374 5563295 - 5563262 - G 86 -18.1 -2.82516 | GCGCGCACCAGCACA TCGGCGCAGCCCAGG CCAG CCGGGCCTGCGCCGA TGATGGCGACGCGCT TERM 4375 5563680 - 5563693 + g 100 -3.8 -5.78622 | overlap 5563674 5563673 CGAACTCCTTCTTGC GCTG GCGCAA CAGC TTTTTTTTCGGGTCC gltB 5568327 - 5563882 - | glutamate synthase subunit alpha TERM 4376 5565072 - 5565058 - G 74 -10 -3.72576 | opp_overlap 5565070 TGGCGCGGTACCAAA GCCGAA GCT TTCGGC GCCGAGAATGGCCGC TERM 4377 5565602 - 5565590 - G 73 -6.9 -4.34402 | opp_overlap 5565592, overlap 5565591 5565592 GGGGTCACACCAAAA CGGCC GGT GGCCA CCTGCTTGATCTTCG TERM 4378 5567747 - 5567728 - G 79 -8.5 -4.3739 | opp_overlap 5567744, overlap 5567729 CAGGTCTGGATAAAA CGCCGCG AGATCG CGCGGCA TCATCAGGCCTTTGT TERM 4379 5568360 - 5568371 + r 72 -2.2 -5.00616 | overlap 5568344 GTTCACCTCTCAACG GAGG TAAA TCTC TTTTTTAACAACCAC TERM 4380 5568640 - 5568615 - R 100 -18.3 -4.52589 | GTCCGGGACAGAAAA GCCTGCCGCGC TCGG GCGCAGCAGGC TAGTCGAAAGCTAGA Pput_4950 5570302 - 5568701 - | sporulation domain-containing protein TERM 4381 5568977 - 5569009 + g 86 -8.4 -4.652 | gap 1, opp_overlap 5568980, overlap 5569005 CTTCTGTCCGGCATA CCAGCCGCTGTT-GC CAGC GCTAGCGGAGGCTGG TTTTTCAGCTGGTTT aroB 5571415 - 5570318 - | 3-dehydroquinate synthase aroK 5572030 - 5571512 - | shikimate kinase Pput_4953 5573297 - 5572035 - | type IV pilus secretin PilQ TERM 4382 5572512 - 5572522 + gr 77 -2.4 -5.08824 | overlap 5572511 CTGCGAAATGATCTC GCCG TTG CCGC TTTTTTCCATGGCAC Pput_4954 5574222 - 5573221 - | hypothetical protein Pput_4955 5574770 - 5574234 - | fimbrial assembly family protein Pput_4956 5575648 - 5574767 - | Tfp pilus assembly protein ATPase PilM-like protein TERM 4383 5576591 - 5576558 - g 83 -12.4 -4.10007 | ACAAGCTGGGTAAAA TCGACCAGGCCAGC TACGAG GCCGCCCTGGCCGA GCCGCTCAACGCCAG Pput_4957 5575852 - 5578305 + | 1A family penicillin-binding protein TERM 4384 5578345 - 5578370 + T 100 -20.5 -2.78384 | opp_overlap 5578349 GCGTGGGCGCGTGAA TCGAGCGCCGC CCGC GCGGCGCTCGA TCTGATAGGCGCCAC TERM 4385 5578366 - 5578349 - T 78 -14.1 -2.52464 | opp_overlap 5578345 GGGCGCGTGAATCGA GCGCCGC CCGC GCGGCGC TCGATCTGATAGGCG TERM 4386 5578441 - 5578464 + T 100 -19.6 -5.38951 | opp_overlap 5578441 AAGCCCCAACAAAAA GCCCCGGCTC ATGC GAGCCGGGGC TTTTTTATGTCGCTT TERM 4387 5578464 - 5578441 - T 100 -19.6 -5.08088 | opp_overlap 5578441 AAGCCCCAACAAAAA GCCCCGGCTC ATGC GAGCCGGGGC TTTTTTATGTCGCTT Pput_4958 5579764 - 5578487 - | malate dehydrogenase Pput_4959 5580754 - 5579933 - | nuclease TERM 4388 5580710 - 5580692 - G 100 -9.5 -5.25803 | opp_overlap 5580692, overlap 5580679 AACGCCCACAAAAAA GGCGCCC ACAAG GGACGCC TTCTTCAGCAACAAT Pput_4960 5581059 - 5580757 - | ribosomal protein L31 TERM 4389 5581687 - 5581645 - g 71 -12.6 -3.02013 | overlap 5581640 ACCTGAACAAGGACA GCCTCGACCTGCTGCTGGCC AAG GACCTGGTGCAGATCGAGAC GCGCCGCCACTTGCC TERM 4390 5582314 - 5582289 - g 74 -11.7 -3.39895 | opp_overlap 5582311 5582312 CTGCGTATGAACCAA CGCGCCGGGGG GGCA CGCCCGCCGCG CATGCTGCGCCTTGA Pput_4961 5581140 - 5583359 + | primosome assembly protein PriA TERM 4391 5585116 - 5585089 - g 78 -6.3 -4.57341 | gap 1, overlap 5585076 AACGTCGCCGAAAAA GGCACGCCGCAC GTATT GTGCAGC-TACC TGTACGACTTGGCCG argS 5583547 - 5585283 + | arginyl-tRNA synthetase TERM 4392 5585325 - 5585303 - g 90 -2.5 -5.4505 | overlap 5585304 5585305 5585315 5585316 GCTGCCAAGAAAAAA CCTGCCCCG AAACG CGGCGCCAG CCGCCAGACGGCACC TERM 4393 5585364 - 5585348 - g 70 -10.1 -3.55563 | ACGGCACCGGCCAAA CAGCCGA TCC CCGGCTG GGTATGGCTGGCGGT TERM 4394 5585492 - 5585481 - g 72 -7.2 -4.13343 | overlap 5585472 5585471 5585482 AGAAACCGGCGAAAA CGGC CGAA GCCG GCAAGCCCGCGCAAG TERM 4395 5585656 - 5585604 - g 74 -5.5 -4.4009 | overlap 5585651 CCGTACCGGAGAAAA CGCCACCGGTGCCGGC-CCAGCCGG TAACC CCGG-TGACACCAGCAGAAGCGGCG AAAATCGACACGGCG Pput_4963 5585285 - 5585983 + | sporulation domain-containing protein TERM 4396 5585991 - 5586018 + T 100 -17 -4.72272 | opp_overlap 5585991 GCCAGTAACAAAGAA GGCCTTGCCGCG GCGG CGCGACAAGGCC TTTTTCATGGGGGGC TERM 4397 5586018 - 5585991 - T 100 -19.2 -4.24413 | opp_overlap 5585991 GCCAGTAACAAAGAA GGCCTTGCCGCG GCGG CGCGACAAGGCC TTTTTCATGGGGGGC Pput_4964 5586494 - 5586075 - | TM2 domain-containing protein Pput_4965 5586661 - 5587287 + | NLP/P60 protein Pput_4966 5588414 - 5587416 - | twitching motility protein Pput_4967 5588480 - 5589166 + | alanine racemase domain-containing protein Pput_4968 5589205 - 5590023 + | pyrroline-5-carboxylate reductase Pput_4969 5590034 - 5590624 + | protein of unknown function YGGT TERM 4398 5590638 - 5590686 + F 79 -12.4 -3.66356 | gap 1, overlap 5590640 GAGGCTCGCCAGAGC CAGCG-TGCCCCCCGTCGCAAGC CTTT GCTTGCCGCTGGGGGTAGCGCTC TTTAGACTTACGCCT TERM 4399 5590640 - 5590684 + F 88 -15 -3.41222 | gap 1, overlap 5590638 GGCTCGCCAGAGCCA GCG-TGCCCCCCGTCGCAAGC CTTT GCTTGCCGCTGGGGGTAGCGC TCTTTAGACTTACGC metX 5590724 - 5591863 + | homoserine O-acetyltransferase Pput_4971 5591871 - 5592491 + | methionine biosynthesis protein MetW Pput_4972 5592514 - 5592948 + | hypothetical protein TERM 4400 5593187 - 5593210 + G 74 -13.1 -3.28712 | overlap 5593177 GGACTTCCTCGGCGG CGCGCCGGG CATCTA CTCGGCGCG TTATGCCGACGGCAA Pput_4973 5592945 - 5593541 + | putative deoxyribonucleotide triphosphate pyrophosphatase Pput_4974 5593538 - 5594713 + | coproporphyrinogen III oxidase Pput_4975 5594723 - 5595049 + | hypothetical protein TERM 4401 5595184 - 5595201 + T 91 -6.9 -5.44119 | opp_overlap 5595184, overlap 5595197 CCTACAAAGAAAAAA CCGCCCT TCTC AAGGCGG TTTTTTTCGCCTGCA TERM 4402 5595201 - 5595184 - T 100 -9.1 -5.72622 | opp_overlap 5595184 5595197 CCTACAAAGAAAAAA CCGCCCT TCTC AAGGCGG TTTTTTTCGCCTGCA trmB 5595980 - 5595258 - | tRNA (guanine-N(7))-methyltransferase thiG 5596802 - 5595990 - | thiazole synthase Pput_4978 5597057 - 5596857 - | sulfur carrier protein ThiS Pput_4979 5597531 - 5597160 - | hypothetical protein mtgA 5597596 - 5598306 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4403 5598426 - 5598464 + T 70 -9.6 -3.53012 | opp_overlap 5598443, overlap 5598427 TCCTCGCGGGGCAGA TCCGCGCCTACAGG CAACCGCATCC CCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 4404 5598507 - 5598533 + T 90 -9.3 -4.86731 | opp_overlap 5598507, overlap 5598502 AGCACAAACAAAAAA GCCGCTCACCC CATTC GGGCCAGCGGC TTTTCTTTACAACCC TERM 4405 5598533 - 5598507 - T 100 -11.5 -5.73978 | opp_overlap 5598502 5598507 AGCACAAACAAAAAA GCCGCTCACCC CATTC GGGCCAGCGGC TTTTCTTTACAACCC Pput_4981 5599411 - 5598557 - | RNA polymerase factor sigma-32 Pput_4982 5600548 - 5599523 - | hypothetical protein Pput_4983 5601216 - 5600545 - | cell division ATP-binding protein FtsE Pput_4984 5602712 - 5601219 - | signal recognition particle-docking protein FtsY Pput_4985 5602944 - 5604299 + | peptidase M16 domain-containing protein TERM 4406 5604904 - 5604885 - g 78 -3.4 -5.03227 | opp_overlap 5604894 5604900, overlap 5604886 5604887 5604896 ATATGAGAAACAAAA CCCCGGCA AGAT CGCCGGCA AGGCCCTTTTCGGCA Pput_4986 5604292 - 5605782 + | peptidase M16 domain-containing protein Pput_4987 5605782 - 5606384 + | putative methyltransferase Pput_4988 5606475 - 5607776 + | peptidase M16 domain-containing protein TERM 4407 5608611 - 5608575 - g 75 -13.7 -3.02829 | overlap 5608564 GATAGCCGTCGAACA GGCCGGTGCCAGCAG TGCGGTC CTGCTGGCACTGCCC ATGAACGTACCCGCC Pput_4989 5607769 - 5609139 + | peptidase M16 domain-containing protein Pput_4990 5609200 - 5610192 + | alpha/beta hydrolase fold Pput_4991 5611374 - 5610424 - | transposase, IS111A/IS1328/IS1533 Pput_4992 5612523 - 5611669 - | rhodanese domain-containing protein TERM 4408 5612573 - 5612551 - R 74 -11.3 -3.23572 | gap 1, opp_overlap 5612550, overlap 5612549 ATCGATGGCACAAGA GCCCTGG-GC TAGT GCTCCAGGGC CTGGTTGAACGGTAC Pput_4993 5613224 - 5612559 - | TetR family transcriptional regulator TERM 4409 5612883 - 5612869 - G 78 -7 -4.57073 | CAGCGTTCGGAAAAA CGCCGG TAA CGGGCG GCCAGTTCGGCATCG TERM 4410 5613691 - 5613647 - g 73 -11.4 -3.60431 | gap 2 AAAAGCACTTGCAAA GCTGGATGCGCACCCGCCGACG CCG CGTCGGCCTG-GCGT-TCCAGC CGGCCAGCGCACAGG Pput_4994 5613376 - 5614800 + | aldehyde dehydrogenase Pput_4995 5614811 - 5615296 + | hypothetical protein Pput_4996 5615317 - 5616915 + | glucose-methanol-choline oxidoreductase TERM 4411 5617178 - 5617153 - g 100 -11.9 -5.07486 | overlap 5617175 CAGCCCCAAGAAAAA CCCCTTGTTCC CCCT GGAACAACGGG TTGAGCTCGCCCGTG coaD 5617028 - 5617507 + | phosphopantetheine adenylyltransferase Pput_4998 5617615 - 5617866 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pput_4999 5618839 - 5618027 - | formamidopyrimidine-DNA glycosylase Pput_5000 5619715 - 5618843 - | putative signal transduction protein TERM 4412 5620792 - 5620772 - g 78 -5.4 -4.69464 | gap 1, overlap 5620773 AAAAGACCTGAAAAA CGGCGA-AG CGGC CTACCGCCG CCTGAACGAGCAGGC Pput_5001 5619837 - 5621033 + | hypothetical protein TERM 4413 5621063 - 5621047 - f 100 -15.1 -4.59109 | opp_overlap 5621047 GATATCTGCCAAAAA GGGCCGC CCA GCGGCCC TTTCCTGCCGCAATC TERM 4414 5621047 - 5621063 + F 95 -15.1 -3.72893 | opp_overlap 5621047 GATATCTGCCAAAAA GGGCCGC CCA GCGGCCC TTTCCTGCCGCAATC Pput_5002 5621304 - 5623145 + | dihydroxy-acid dehydratase TERM 4415 5623188 - 5623170 - T 100 -17.4 -4.08557 | opp_overlap 5623170 GGCGTGAAATAAGAA CCGGCGCC CTG GGCGCCGG TTTTTTTATGCCTGC TERM 4416 5623170 - 5623188 + T 100 -17.4 -5.64274 | opp_overlap 5623170 GGCGTGAAATAAGAA CCGGCGCC CTG GGCGCCGG TTTTTTTATGCCTGC Pput_5003 5624316 - 5623261 - | hypothetical protein TERM 4417 5623331 - 5623342 + g 76 -5.8 -4.60487 | overlap 5623330 AACCCTTCCTTGGCC TGCG CTGC CGCA TTTTTGGCAATCATC TERM 4418 5625120 - 5625134 + G 74 -5 -4.66953 | CCAAGCCGACCTCGA TCATCA GCG TGGTGA TTTTTGCCGTGTTCC Pput_5004 5624561 - 5625952 + | sodium:dicarboxylate symporter TERM 4419 5625963 - 5625979 + T 88 -15.1 -3.53012 | CCTGATAGATTGCCG GGGGCGC GTT GCGCCCC TTTCGCACAAGGCCG Pput_5005 5626743 - 5626228 - | dihydrofolate reductase TERM 4420 5626866 - 5626836 - g 82 -14.6 -3.33162 | CACGCCACTGGACAA GCGCTGGCTCACCG AAG CGGTACGCCTGCGC GAAGAACATGCCGGC Pput_5006 5626798 - 5628189 + | hypothetical protein TERM 4421 5628672 - 5628706 + G 80 -14.2 -3.18681 | overlap 5628673 ACCGCGAACCGGAAT GGCGTGAAGCCCTTGC CCG GCTTGGGCTTCACGCA TTGGTGCGGTTCGAC TERM 4422 5628673 - 5628705 + G 86 -17.7 -2.50994 | overlap 5628672 CCGCGAACCGGAATG GCGTGAAGCCCTTGC CCG GCTTGGGCTTCACGC ATTGGTGCGGTTCGA TERM 4423 5628845 - 5628787 - g 90 -13.6 -4.07568 | opp_overlap 5628831, overlap 5628788 GCTGCTGCTGGAAAA CGCCCGCCCGGCGCTGCAACGGCTGATC GAC GACCAGCAGGCGCAGCGCTTGGCACGCC GGCACAGCGGCAAGC TERM 4424 5628844 - 5628788 - g 88 -17.1 -3.04398 | opp_overlap 5628831, overlap 5628787 CTGCTGCTGGAAAAC GCCCGCCCGGCGCTGCAACGGCTGATC GAC GACCAGCAGGCGCAGCGCTTGGCACGC CGGCACAGCGGCAAG Pput_5007 5628182 - 5629546 + | GTP-binding protein, HSR1-related TERM 4425 5629577 - 5629632 + T 70 -9.7 -3.53444 | gap 2 CCTTTCGCGGGTGAA CCCGCTCCTACGGCGGCCTGTGTAGTG TGCC CACCCC-CAATCTGC-GTAGGAGCGGG TTTACCCGCGAATAC Pput_5008 5630846 - 5629821 - | extracellular solute-binding protein Pput_5009 5632589 - 5630865 - | binding-protein-dependent transport systems inner membrane component Pput_5010 5633649 - 5632591 - | ABC transporter related TERM 4426 5632764 - 5632774 + g 72 -2.4 -4.71426 | TTTCGCGGACCATGG CCGG GAA CAGG TTTTCTTCGTGCACC TERM 4427 5632966 - 5632942 - G 73 -12.8 -3.14132 | opp_overlap 5632935 5632935, overlap 5632954 GCCCTGGCCGACGAA CTCGGCCACG AACGG CGTGGCCGGG TGGTCATAGATTTCC Pput_5011 5634750 - 5633881 - | LysR family transcriptional regulator Pput_5012 5637012 - 5634760 - | heavy metal translocating P-type ATPase Pput_5013 5637096 - 5637539 + | MerR family transcriptional regulator Pput_5014 5637999 - 5637658 - | thymidylate synthase-like protein Pput_5015 5638286 - 5642776 + | AAA ATPase TERM 4428 5642989 - 5643013 + G 76 -6.4 -4.4261 | AGCCTTGGTTCCTCC GTTCATGCAG CTACC CGGCATGAGC TTTTCCTCTTGGGCA Pput_5016 5642897 - 5644459 + | hypothetical protein TERM 4429 5645611 - 5645636 + G 75 -4 -4.71426 | gap 1, overlap 5645612 GGAAGGCAAACAGGA TCCTGACCGTG TGTAC TACGG-CAGGG TTTTCTTCCTCAAGG Pput_5017 5645216 - 5646046 + | hypothetical protein Pput_5018 5646737 - 5646528 - | hypothetical protein Pput_5019 5647123 - 5646734 - | hypothetical protein TERM 4430 5647918 - 5647872 - g 80 -14.5 -3.20367 | gap 1, overlap 5647864 5647911 CAAGAACGTCAGGAA CTTCCCCACCGAT-GCCACGAC CCTG GCCGCGACGAACGATGGGGAAG AACTGCCTCACCATG Pput_5020 5647534 - 5647977 + | hypothetical protein Pput_5021 5648856 - 5648212 - | 3-isopropylmalate dehydratase, small subunit Pput_5022 5650266 - 5648863 - | 3-isopropylmalate dehydratase, large subunit Pput_5023 5651879 - 5650548 - | major facilitator transporter TERM 4431 5651477 - 5651465 - G 71 -9.1 -3.76224 | GCGTCAGGTAGTAAA GCACC CCT GGTGC AAAGCCCGCCTCCAT TERM 4432 5651940 - 5651953 + r 71 -8.1 -3.91144 | TTTGTTTTCTGGCTC GCGAC GTTT GTCGC TTTGTCAGGTATCAG Pput_5024 5652900 - 5651965 - | pyruvate carboxyltransferase Pput_5025 5654087 - 5652897 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 4433 5654189 - 5654167 - R 70 -9.8 -3.39844 | overlap 5654165 5654168 GGTATATCGGAAAGA GGCGTTCGCG TTT CGCGAACACG AGAGACTAGCGCGGC TERM 4434 5654188 - 5654168 - R 75 -13.3 -2.63585 | overlap 5654167 5654165 GTATATCGGAAAGAG GCGTTCGCG TTT CGCGAACAC GAGAGACTAGCGCGG Pput_5026 5655103 - 5654195 - | LysR family transcriptional regulator Pput_5027 5655487 - 5655278 - | hypothetical protein Pput_5028 5655901 - 5655509 - | hypothetical protein TERM 4435 5655820 - 5655804 - G 100 -6.5 -5.64274 | opp_overlap 5655804 TCAGGCACAAAAAAA CCGCC TTTGAGG GGCGG TTTCTTTGACGATGT TERM 4436 5655804 - 5655820 + g 81 -7.9 -4.43208 | opp_overlap 5655804 TCAGGCACAAAAAAA CCGCCTT TGA GGGGCGG TTTCTTTGACGATGT Pput_5029 5657032 - 5655965 - | hypothetical protein Pput_5030 5658505 - 5657225 - | DNA-directed DNA polymerase Pput_5031 5658920 - 5658492 - | putative prophage repressor Pput_5032 5659199 - 5660776 + | hypothetical protein TERM 4437 5661290 - 5661276 - f 78 -6.4 -4.80853 | ATGCCAAAAAAATAA CCTAGG CAG CCTAAG GACAGCATCCATGCG Pput_5034 5661301 - 5663019 + | hypothetical protein TERM 4438 5663014 - 5663068 + T 81 -8.7 -4.43642 | gap 1, opp_overlap 5663001 5663023 5663026 5663029 5663035, overlap 5663020 5663023 5663029 ATTTGGCCTGCAGTG GC-ATGACAATACGAAGCAGAAGCGC AGGA GCGCTTCTGCTTCCTATACTTTTAGC TTTATTGATTATTTT TERM 4439 5663020 - 5663061 + T 95 -13.1 -4.42851 | opp_overlap 5663001 5663023 5663026 5663029 5663035, overlap 5663014 5663023 5663029 CCTGCAGTGGCATGA CAATACGAAGCAGAAGCGC AGGA GCGCTTCTGCTTCCTATAC TTTTAGCTTTATTGA TERM 4440 5663023 - 5663058 + T 95 -19.2 -3.16695 | opp_overlap 5663023 5663026 5663029 5663035, overlap 5663020 5663014 5663029 GCAGTGGCATGACAA TACGAAGCAGAAGCGC AGGA GCGCTTCTGCTTCCTA TACTTTTAGCTTTAT TERM 4441 5663058 - 5663023 - T 100 -19.2 -3.41051 | opp_overlap 5663023 5663020 5663014 5663029, overlap 5663026 5663029 5663035 GCAGTGGCATGACAA TACGAAGCAGAAGCGC AGGA GCGCTTCTGCTTCCTA TACTTTTAGCTTTAT TERM 4442 5663055 - 5663026 - T 100 -20.9 -2.56271 | opp_overlap 5663023 5663020 5663014 5663029, overlap 5663023 5663029 5663035 GTGGCATGACAATAC GAAGCAGAAGCGC AGGA GCGCTTCTGCTTC CTATACTTTTAGCTT TERM 4443 5663052 - 5663029 - T 93 -16.8 -3.43203 | opp_overlap 5663029 5663023 5663020 5663014, overlap 5663026 5663023 5663035 GCATGACAATACGAA GCAGAAGCGC AGGA GCGCTTCTGC TTCCTATACTTTTAG TERM 4444 5663029 - 5663052 + T 90 -16.8 -3.37531 | opp_overlap 5663026 5663023 5663029 5663035, overlap 5663023 5663020 5663014 GCATGACAATACGAA GCAGAAGCGC AGGA GCGCTTCTGC TTCCTATACTTTTAG Pput_5035 5663838 - 5663077 - | hypothetical protein TERM 4445 5664542 - 5664529 - R 100 -9.5 -5.7946 | opp_overlap 5664529 CCGCTAACAAAAAAA CCGCC AATC GGCGG TTTTTTCAATTGTGT TERM 4446 5664529 - 5664542 + r 100 -9.5 -5.20154 | opp_overlap 5664529 CCGCTAACAAAAAAA CCGCC AATC GGCGG TTTTTTCAATTGTGT Pput_5037 5665058 - 5664693 - | hypothetical protein Pput_5038 5666025 - 5665399 - | hypothetical protein Pput_5039 5666430 - 5666047 - | hypothetical protein Pput_5040 5666912 - 5666433 - | hypothetical protein Pput_5041 5667458 - 5666943 - | hypothetical protein Pput_5042 5668254 - 5668006 - | hypothetical protein TERM 4447 5668324 - 5668309 - R 100 -11.8 -4.72986 | opp_overlap 5668300 5668321 GACTCGCACGAAAAA CCGGCC CTGA GGCCGG TCTCCGGTGTTGACT Pput_5043 5669183 - 5668350 - | thymidylate synthase Pput_5044 5669692 - 5669180 - | hypothetical protein TERM 4448 5669347 - 5669329 - G 83 -13.2 -3.88787 | opp_overlap 5669329 TCATATCCGTATAAA GCCGAAGA TTT TCTTCGGC TTGGTCTTCCGATTT TERM 4449 5669329 - 5669347 + g 74 -13.2 -3.38361 | opp_overlap 5669329 TCATATCCGTATAAA GCCGAAGA TTT TCTTCGGC TTGGTCTTCCGATTT TERM 4450 5669395 - 5669410 + g 74 -9 -3.91897 | AATGTAAAACCTCCA CTCGAG CTGA CTCGAG TTTCTCCGTCAGAAC TERM 4451 5669416 - 5669443 + g 86 -6.9 -5.04249 | CTGACTCGAGTTTCT CCGTCAGAACC TTAACT GGATCTGCCGG TTTATTTTTTGAGAC Pput_5045 5671776 - 5669692 - | hypothetical protein TERM 4452 5670035 - 5670064 + g 77 -12.9 -3.57792 | gap 1, opp_overlap 5670033 TATCCCTGGAACACT CGCTGAAGGCGCTC TTT GTGCGC-TTCAGCG TTTACCCCTGCATAG Pput_5046 5674157 - 5671779 - | phage integrase family protein TERM 4453 5671850 - 5671870 + g 76 -11.2 -3.76224 | GGCCTTCAGCCAGCT CCTCAGAC GTGAA GTCTGAGG TTTCCTCACTCAGGA Pput_5047 5675383 - 5674154 - | phage integrase family protein TERM 4454 5675187 - 5675206 + g 91 -5 -5.31877 | overlap 5675190 TTCTGGCCGTAGGTC TGAGCAGA TGTG TCTGCTAA TTTTTTGTGCTGAAT TERM 4455 5675483 - 5675497 + r 73 -5.6 -4.64766 | TTTTTTAGGCTAGGA GCGCGT ACT GTGCGC TTTTTCCCATGTCCA Pput_5048 5676176 - 5675472 - | thymidylate synthase TERM 4456 5675536 - 5675519 - G 74 -4.8 -4.64676 | CCATGTCCAATAAAA GCCCCA GGTCGT TGGAGC GGATGTAGAGGGTCA TERM 4457 5676218 - 5676196 - R 100 -16.3 -4.72986 | opp_overlap 5676191 5676212 TACCTGTAGCAAAAA CGGCAGGGG GATCG CCCCTGCCG TGGGATTAATCAGGC Pput_5049 5677034 - 5676228 - | prolipoprotein diacylglyceryl transferase TERM 4458 5676645 - 5676609 - G 73 -12.9 -3.14132 | TTCGGCGTTGATGAA GTTGCCGATACGCCCGG CAC CCAGGCCAATCGGCACC AGCGGGGCGACGAAG TERM 4459 5677074 - 5677063 - R 72 -2.2 -5.00138 | GATTCAAATCAAAAA GCTG AGGC CAAC ACAGAACAACAGGGC Pput_5050 5677833 - 5677051 - | hypothetical protein TERM 4460 5677968 - 5677948 - H 93 -6.1 -5.65177 | overlap 5677954 ACAGTGACAAAAAAA CACAGAGGC CCA ACCTATGTG CCTGATCGTATTTGC Pput_5051 5677964 - 5678710 + | hypothetical protein Pput_5052 5681277 - 5678998 - | phosphoenolpyruvate-protein phosphotransferase PtsP Pput_5053 5681779 - 5681300 - | dinucleoside polyphosphate hydrolase TERM 4461 5681853 - 5681823 - H 83 -11.9 -3.86346 | gap 1, opp_overlap 5681823 GCATTGTTCCACAAA GCTT-GCGAGCGCA GCAA CGCGCCCGCCAAGC TTATGTGCAGCTGCG Pput_5054 5681921 - 5682577 + | HAD family hydrolase Pput_5055 5683132 - 5682707 - | hypothetical protein Pput_5056 5684716 - 5683202 - | threonine dehydratase TERM 4462 5684468 - 5684518 + g 100 -17.4 -3.62597 | overlap 5684458 GCGCGCGGCCAGGGC CAGGCCTTGGGCGTGGTTGCCGGC CGA GGCGGTGACCACGCCACGGGCCAG TTCTTCCGGGCTCAG Pput_5057 5684850 - 5685524 + | ribose-5-phosphate isomerase A TERM 4463 5685542 - 5685599 + T 79 -13 -3.53012 | gap 3, opp_overlap 5685542 CCCTTCGCGGGTAAA CCCGCTCCTACA-AGGTACCCCACCGG CCTGGAA CCG-TGGCG-ATCTCTGTAGGAGCGGG TTTACCCGCGAACAG TERM 4464 5685599 - 5685542 - T 85 -14.1 -3.53012 | gap 1, opp_overlap 5685542 CCCTTCGCGGGTAAA CCCGCTCCTACAAGGTACCCCACCGGCC TGG AACCG-TGGCGATCTCTGTAGGAGCGGG TTTACCCGCGAACAG Pput_5058 5686531 - 5685629 - | SdiA-regulated domain-containing protein TERM 4465 5686483 - 5686457 - G 77 -13 -3.66803 | overlap 5686450 5686436 CTCGAACAGGCGAAA CTCCTGCCCAGC CCA GCCAAGCAGGAG CAGACCAATGGCAGC Pput_5059 5687542 - 5686622 - | SdiA-regulated domain-containing protein TERM 4466 5687384 - 5687394 + g 74 -5.4 -4.64861 | overlap 5687374 GCTGCGCGCGGTGGT GCTT TCG AAGC TTTCTTTTACCCACA Pput_5060 5688410 - 5687745 - | fumarylacetoacetate (FAA) hydrolase TERM 4467 5688041 - 5688063 + g 76 -6.8 -4.47271 | overlap 5688042 CGCCGTCAAAGCACT TGGCCAGCTC CCA GGGCAGGCCC TTTTCCTTCAGTTTG Pput_5061 5689858 - 5688437 - | FAD linked oxidase domain-containing protein TERM 4468 5688481 - 5688494 + g 71 -5.9 -4.26351 | TCATGATGCCGTTAG GGTCG AACA CGGCC TTTATTGCCTTCATG TERM 4469 5688947 - 5688971 + g 71 -12.9 -3.10796 | opp_overlap 5688951 GACGCAGTGCTCGAA GGTAGCCAATG CTT CATTGGCAACC TCTTCAGTGCTGGCC TERM 4470 5691154 - 5691134 - g 73 -8.3 -4.09215 | CAGACCAACGAGAAA GTCGGTTAC GTG GTAATCGAC GTTGACGCCGAGTAC Pput_5062 5690006 - 5691235 + | D-3-phosphoglycerate dehydrogenase TERM 4471 5691257 - 5691277 + T 100 -14 -5.38497 | opp_overlap 5691257 TTGCAGGATGAAGAA GGGAGGCC CTGGT GGCCTCCC TTTTTTCATTTCACT TERM 4472 5691277 - 5691257 - T 91 -14 -3.75024 | opp_overlap 5691257 TTGCAGGATGAAGAA GGGAGGCC CTGGT GGCCTCCC TTTTTTCATTTCACT TERM 4473 5691288 - 5691302 + T 71 -4.3 -4.65916 | CTCCCTTTTTTCATT TCACT TCGAC AGTGA TTTTCTTCGACTCGA Pput_5063 5691759 - 5691283 - | hypothetical protein Pput_5064 5691983 - 5692471 + | hypothetical protein Pput_5065 5693165 - 5692662 - | hypothetical protein Pput_5066 5693787 - 5693152 - | 2OG-Fe(II) oxygenase Pput_5067 5693898 - 5694650 + | hypothetical protein Pput_5068 5695637 - 5694651 - | lysophospholipase-like protein TERM 4474 5695757 - 5695714 - H 100 -20.4 -3.54459 | gap 1, opp_overlap 5695698 5695751 CGAACGGGCCGCAAA GCGGCCCCAGCGATCTATGCA TGA TGCCGAGATC-CTGGGGCCGC TGCGCGGCCCTTTCG TERM 4475 5695751 - 5695767 + H 88 -15.1 -3.53012 | opp_overlap 5695714 GATGCCGAGATCCTG GGGCCGC TGC GCGGCCC TTTCGCGACGCAAGG TERM 4476 5696185 - 5696158 - g 70 -7.6 -4.08216 | CCATGTGCTGCAAAA GCCCGGCAGCCA CGGC CAGCTACCGGCC AATATCGGTAGCTTG Pput_5069 5695859 - 5696428 + | hypothetical protein Pput_5070 5696973 - 5696407 - | hexapaptide repeat-containing transferase TERM 4477 5699110 - 5699054 - g 75 -14.4 -2.71144 | gap 1, overlap 5699020 CACCCTCGGCAAGGA CCCAGCCAGCTGGCAGTGGGGCAAGGC CCAT ACCCTGACCCACAACCATCCG-CTGGG GGTGAAAAAGCCGCT Pput_5071 5697060 - 5699426 + | peptidase S45, penicillin amidase TERM 4478 5699500 - 5699488 - T 74 -10.5 -3.55761 | opp_overlap 5699492 5699497 GATTTAGCCGCGAAA CCGGC GCA GCCGG TGCCATGCACCGCGT TERM 4479 5699605 - 5699584 - T 100 -15.9 -4.45544 | opp_overlap 5699584 TCCCAGCAATGAAAA CGCCGACAC AAAG GTGTCGGCG TTGGGTCATGCAAGG TERM 4480 5699584 - 5699605 + T 85 -15.9 -3.09516 | opp_overlap 5699584 TCCCAGCAATGAAAA CGCCGACAC AAAG GTGTCGGCG TTGGGTCATGCAAGG Pput_5072 5700569 - 5699634 - | NLPA lipoprotein TERM 4481 5699939 - 5699958 + g 73 -2.8 -4.6856 | gap 1, overlap 5699939 5699940 GGTTCTCGGCAATGT C-CTTTGGC GTG GCCAGGGCG TTTTTCGGGTCTTTC Pput_5073 5701425 - 5700595 - | sigma-54 factor interaction domain-containing protein Pput_5074 5702071 - 5701490 - | hypothetical protein TERM 4482 5702261 - 5702244 - R 100 -9.8 -5.10461 | opp_overlap 5702243 5702241 5702244 TTCAGGCAAGAAAAA CCCGGG ACCATG CCCGGG CTCTCTTTTCCTTGT Pput_5075 5703271 - 5702282 - | sulfate ABC transporter, ATPase subunit Pput_5076 5704147 - 5703275 - | sulfate ABC transporter, inner membrane subunit CysW Pput_5077 5704977 - 5704159 - | sulfate ABC transporter, inner membrane subunit CysT TERM 4483 5704241 - 5704218 - G 70 -7.4 -3.97042 | opp_overlap 5704238, overlap 5704219 5704231 5704233 GCAGGATGAAGGAAA CCACCAGCAT CAAC ACGCCGATGG CGGTCGCGCCGGTGT TERM 4484 5705116 - 5705075 - R 100 -20.1 -3.48924 | opp_overlap 5705075 5705083 5705106 CCATTCGCGACACAA GGCCGCTCCCACAGGGGAC TATG GTTCCTTGTGGGGGCGGCC TTGTGCCGCGAATGG TERM 4485 5705075 - 5705116 + r 100 -26.7 -3.29144 | opp_overlap 5705075, overlap 5705083 5705106 CCATTCGCGACACAA GGCCGCTCCCACAGGGGAC TATG GTTCCTTGTGGGGGCGGCC TTGTGCCGCGAATGG Pput_5078 5706170 - 5705163 - | sulfate ABC transporter, periplasmic sulfate-binding protein Pput_5079 5706403 - 5706221 - | hypothetical protein TERM 4486 5706492 - 5706514 + r 80 -5 -4.9725 | AGTGAGGCGGGATTA TTCTTAAAAA TAC TGTTTAAGAA TTTTTATATAACCAT Pput_5080 5709690 - 5706637 - | acriflavin resistance protein TERM 4487 5708734 - 5708721 - G 71 -8.1 -3.85698 | CGGCCTGGTCAGAAA CGGTG TGTA CACCG ACACCCACCGGCAGA Pput_5081 5710754 - 5709687 - | RND family efflux transporter MFP subunit Pput_5082 5711839 - 5710751 - | RND family efflux transporter MFP subunit TERM 4488 5711922 - 5711934 + H 70 -3.3 -4.76041 | opp_overlap 5711912 5711909, overlap 5711923 AACATCACTGGCGGG GGCCA TGC TGGCA TTTTTGGTGCCTGTG Pput_5083 5712093 - 5712548 + | hypothetical protein Pput_5084 5713548 - 5712655 - | ornithine carbamoyltransferase Pput_5085 5714465 - 5713545 - | binding-protein-dependent transport systems inner membrane component TERM 4489 5713769 - 5713782 + g 76 -5.9 -4.56775 | opp_overlap 5713755 ACACCAGCATGCAGC CGGCG ATGA TGCCG TTTTTCGACAGCGGT Pput_5086 5715604 - 5714462 - | spermidine/putrescine ABC transporter ATPase subunit TERM 4490 5715035 - 5715046 + g 71 -5.8 -4.32177 | CAGCTCCAGCTGCAT CTGC GAAC GCAG TTTCTTGTCCAGTGC TERM 4491 5715627 - 5715671 + r 74 -2.8 -4.8622 | gap 2, overlap 5715632 ACTCCCAACAAGATT TTTGTGCCCGCG-TGGC-CTGT TCT ACGGTGCCGTCGCGGGTCTGGA TTTTTACTTGCCCGA Pput_5087 5716769 - 5715675 - | extracellular solute-binding protein Pput_5088 5718023 - 5716926 - | extracellular solute-binding protein TERM 4492 5718091 - 5718107 + r 70 -12.3 -2.62933 | opp_overlap 5718101 GGTGCAGAGCGCGCG GCGACTG AAA CAGTCGC TAGTCTGGCAAGTTA Pput_5089 5719553 - 5718192 - | putative aminotransferase Pput_5090 5720960 - 5719602 - | glutamate--putrescine ligase TERM 4493 5720790 - 5720825 + g 78 -6.6 -4.58395 | opp_overlap 5720779, overlap 5720794 GTAATCGCCGGTCAC GGTCTGCAGCAGCACG CTCT CGGGCAGCCGCATGCC TTTTTCAGCGATGAA Pput_5091 5721535 - 5722911 + | glutamate--putrescine ligase TERM 4494 5722943 - 5722919 - T 100 -19.3 -4.54727 | CCGTGTAAACGAAAA CGCCGCCCCCA TTG TGGGAGCGGCG TCGCGATAGGGGCGA TERM 4495 5722997 - 5723013 + T 88 -15.1 -3.53012 | AAGCTGATATTGTCG GGGCCGC TTT GCGGCCC TTTCGCGACGCAAGG Pput_5092 5724355 - 5723057 - | N-acetylglutamate synthase Pput_5093 5725622 - 5724480 - | acetylornithine deacetylase TERM 4496 5727018 - 5726996 - g 78 -6.9 -4.62069 | CGGCGACCTGAAAAA GCTGCACGA GCTGG CCGAGCAGC CTATCAGCGATGAAG Pput_5094 5725740 - 5727107 + | adenylate cyclase TERM 4497 5727186 - 5727135 - T 88 -15 -3.53012 | gap 1, opp_overlap 5727135 TGCTTCGCGGGTAAA CCCGCTCCTACG-TAGGATCCGCGC CAG GCGTGGGGCCAGTCGTAGGAGCGGG TTTACCCGCGAATGG TERM 4498 5727135 - 5727186 + T 100 -21.6 -3.53444 | gap 1, opp_overlap 5727135 TGCTTCGCGGGTAAA CCCGCTCCTACG-TAGGATCCGCGC CAG GCGTGGGGCCAGTCGTAGGAGCGGG TTTACCCGCGAATGG Pput_5095 5727674 - 5727204 - | AsnC family transcriptional regulator Pput_5096 5727801 - 5728106 + | hypothetical protein Pput_5097 5728291 - 5729964 + | type II secretion system protein E Pput_5098 5730053 - 5730367 + | hypothetical protein Pput_5099 5733306 - 5730433 - | glycine dehydrogenase TERM 4499 5732511 - 5732491 - G 83 -13.3 -3.83502 | overlap 5732508 CATCGGCACACCAAA GCGCTGGGT CGA ACCCAGCAC CACATCGGCGCCCAG Pput_5100 5733886 - 5733503 - | glycine cleavage system protein H gcvT 5735020 - 5733938 - | glycine cleavage system aminomethyltransferase T TERM 4500 5735059 - 5735078 + r 76 -3.5 -4.92757 | overlap 5735061 GAAGCGGCGGCGGTC GATGACG TTGGGT CGTCAGC TTTTCTTGTTACTCA Pput_5102 5736770 - 5735148 - | binding-protein-dependent transport systems inner membrane component TERM 4501 5736872 - 5736823 - R 100 -21.4 -3.53012 | opp_overlap 5736823 TCGTTCGCGGGTAAA CCCGCTCCTACGGGGACCGCGC AAGGCA GTGCAGATCCCGTAGGAGCGGG TTTACCCGCGAAAGG TERM 4502 5736823 - 5736872 + r 100 -23.6 -3.53012 | opp_overlap 5736823 TCGTTCGCGGGTAAA CCCGCTCCTACGGGGACCGCGC AAGGCA GTGCAGATCCCGTAGGAGCGGG TTTACCCGCGAAAGG TERM 4503 5736901 - 5736886 - R 79 -11.8 -3.55444 | GGTTTACCCGCGAAA GGGCCC TAAC GGGCCC AAAGAGGATAAGGCC Pput_5103 5737924 - 5736923 - | extracellular solute-binding protein TERM 4504 5738109 - 5738093 - R 100 -15.1 -4.08216 | CTAGTGTCGCGAAAA GGGCCGC AGA GCGGCCC CGCCACTCTCAAGCC Pput_5104 5739341 - 5738118 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 4505 5738707 - 5738697 - G 86 -8.2 -4.66833 | opp_overlap 5738697 5738696 GCTCAAGGGCAAAAA GGCC AAT GGCC CTTCGTCAGTGAAGC Pput_5105 5739827 - 5739345 - | hypothetical protein Pput_5106 5741023 - 5739824 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 4506 5739872 - 5739885 + g 72 -3.7 -4.59773 | CAGGCCCATGGCCTG GCGGG CGAA CCAGC TTTTTGCCGGTGGCA Pput_5107 5742354 - 5741020 - | peptidase M24 Pput_5108 5742930 - 5742376 - | hypothetical protein Pput_5109 5743076 - 5743294 + | hypothetical protein TERM 4507 5743396 - 5743371 - g 71 -9.7 -3.68302 | gap 1 GGAAGAGCGCAACAA CCTGGTCAGCGC TGC GCGCT-ACCTGG ACGGCAAGATGCGCG Pput_5110 5743291 - 5743611 + | hypothetical protein TERM 4508 5743622 - 5743650 + F 70 -12.3 -2.63555 | overlap 5743619 5743618 GCTGAGATTGGTATA CTGGCGCCACTCC CTG GGGGATGCGCCAG TCGGTTATGTCCCTG TERM 4509 5743817 - 5743839 + F 90 -14.9 -3.66908 | overlap 5743813 5743831 GGAGCCTGAATTTTC TTGCCCGCC CCCAA GGCGGGCAA TTCGTTTTGGCCGAC Pput_5111 5743933 - 5744541 + | 5-formyltetrahydrofolate cyclo-ligase Pput_5112 5744713 - 5744561 - | hypothetical protein TERM 4510 5744686 - 5744696 + g 72 -2.4 -4.77896 | opp_overlap 5744677 5744674, overlap 5744675 ACACCAGGATCCACA GCAG ATC CGGC TTTTTACGTTGATTC Pput_5113 5744892 - 5745341 + | hypothetical protein TERM 4511 5746198 - 5746210 + G 74 -9.1 -3.85698 | CGAGCGCGCGCTGCC GGCCA AGG TGGCC TTTGTCGCAGCCAAG TERM 4512 5746316 - 5746292 - g 79 -13.5 -3.53012 | GTGTTCCGGGTCAAA CTGCGCCTGAG CGA CCCAGGCGCCG TGCCGCAAGCCAAAC Pput_5114 5745437 - 5746396 + | secretion protein HlyD family protein TERM 4513 5747605 - 5747631 + G 71 -13.6 -2.61264 | overlap 5747604 CTGCCCCTTGGTTTG CGCCAGCGCCTG TCG CTGGCGGTGGCG GTTCTGCATCGCCCG Pput_5115 5746393 - 5749113 + | ABC transporter related Pput_5116 5749115 - 5750227 + | ABC-2 type transporter TERM 4514 5750295 - 5750278 - T 100 -14.1 -4.40003 | TGGCACAAAGACAAA GGGCGCC TTTC GGCGCCC TACTCACAGACAGGT Pput_5117 5750851 - 5750408 - | hypothetical protein Pput_5118 5751452 - 5751006 - | flagellar basal body-associated protein FliL-like protein TERM 4515 5752109 - 5752096 - g 72 -4.5 -4.58663 | overlap 5752097 AGCAGTGCCGAAAAA CTGGC CGTG GCCAA GGCTGCCGGGGCGGA TERM 4516 5752192 - 5752171 - g 76 -8.7 -4.21141 | gap 1, opp_overlap 5752182 CGCGAAGAAATCAAA CG-CCTGACC GGC GGCCAGGGCG TGGACGTGATCTATG Pput_5119 5751568 - 5752545 + | alcohol dehydrogenase Pput_5120 5753361 - 5752711 - | ChaC family protein TERM 4517 5753416 - 5753430 + r 79 -12.8 -3.53091 | AGCTTCGATTACGCT GCGGCC CCA GGCCGC TTTACCAAGGGCGCT TERM 4518 5753561 - 5753579 + r 78 -13.2 -3.2964 | opp_overlap 5753553 5753549 5753550 AAAGTTATTGGCCAA GGCGGTAA CAA TTACCGCC TTATACCGACACTTT Pput_5121 5754576 - 5753608 - | CDP-6-deoxy-delta-3,4-glucoseen reductase Pput_5122 5756042 - 5754576 - | UbiD family decarboxylase TERM 4519 5756195 - 5756153 - R 89 -17.7 -3.14132 | CCCCTTCGCGAGCAA GCCCGCTCCTACAAGGGCC GCAAT GACCTGTGCAGGAGCGGGC TTGCCCGCGAAGGGC rho 5757509 - 5756250 - | transcription termination factor Rho TERM 4520 5757709 - 5757728 + r 81 -10.6 -4.13767 | opp_overlap 5757710, overlap 5757710 GCTCTGAAAAAGAAA AGCCCCGC ATTT GCGGGGCC TTTTCACATCACAGG TERM 4521 5757710 - 5757727 + r 81 -14.1 -3.08046 | opp_overlap 5757710, overlap 5757709 CTCTGAAAAAGAAAA GCCCCGC ATTT GCGGGGC CTTTTCACATCACAG TERM 4522 5757727 - 5757710 - R 100 -14.1 -5.26119 | opp_overlap 5757710 5757709 CTCTGAAAAAGAAAA GCCCCGC ATTT GCGGGGC CTTTTCACATCACAG Pput_5124 5758066 - 5757737 - | thioredoxin TERM 4523 5759750 - 5759801 + G 70 -12.4 -3.21416 | gap 3, opp_overlap 5759747 5759750 GCTGGAGCAGAACCA GCTGACCCAGGCC-G--ACTTCGCC AACGA GGCGGAGTGGCTGGCCCGGGTCGGC TTCGTCCTCAGCGTA Pput_5125 5758320 - 5759822 + | Ppx/GppA phosphatase Pput_5126 5762052 - 5759809 - | polyphosphate kinase TERM 4524 5762767 - 5762799 + Gr 75 -12.7 -3.11634 | gap 1, overlap 5762755 CTTGGCGGCCTGGTG GCGCTGG-GCGGCC TGCTGT GGCTGCGCCGGCGC TTCCGTACTCTGCGC Pput_5128 5764038 - 5762743 - | sterol desaturase-like protein Pput_5127 5762266 - 5762910 + | hypothetical protein TERM 4525 5764022 - 5764012 - Gf 78 -4.6 -4.74611 | CAGCACAAAAAAGAA CGGC ACG GCCA GCAGTATCAGGTCCA Pput_5129 5764151 - 5764810 + | isoprenoid biosynthesis protein Pput_5130 5765511 - 5765023 - | hypothetical protein TERM 4526 5767481 - 5767459 - g 70 -7.6 -4.07568 | TGGCGTGCGCGAAAA CCTGGTGCTG ACC CTGGACCAGG TCACCGTCAACAGCT TERM 4527 5768016 - 5768031 + G 71 -5.4 -4.40358 | overlap 5768017 ACGAAGCGCATCTGC TGTTGC CACT GCAACG TTTTCTGCGCTCGGT cyaA 5765642 - 5768497 + | adenylate cyclase Pput_5132 5768998 - 5768588 - | nucleoside diphosphate kinase regulator TERM 4528 5769053 - 5769070 + r 86 -14.1 -3.54935 | opp_overlap 5769053 GCAAATAAAGCAAAA CCCCGCC CAAG GGCGGGG TTTGAGAAGGCTTTG TERM 4529 5769070 - 5769053 - R 100 -14.1 -4.72863 | opp_overlap 5769053 GCAAATAAAGCAAAA CCCCGCC CAAG GGCGGGG TTTGAGAAGGCTTTG Pput_5133 5769369 - 5769145 - | hypothetical protein cyaY 5769703 - 5769371 - | frataxin-like protein Pput_5135 5769943 - 5770161 + | hypothetical protein TERM 4530 5770711 - 5770677 - g 75 -3.4 -4.86731 | overlap 5770680 5770681 5770682 CGGCCTTAAAGAAAA CAAGTTCGGCATCGCC ATT GCCGATGCCGAGGCCA TCTACGTACGCGCCG TERM 4531 5770708 - 5770680 - g 83 -7.3 -4.54026 | overlap 5770677 5770681 5770682 CCTTAAAGAAAACAA GTTCGGCATCGCC ATT GCCGATGCCGAGG CCATCTACGTACGCG TERM 4532 5770706 - 5770682 - g 74 -14.3 -2.57714 | overlap 5770681 5770680 5770677 TTAAAGAAAACAAGT TCGGCATCGCC ATT GCCGATGCCGA GGCCATCTACGTACG TERM 4533 5770930 - 5770912 - g 70 -12.4 -3.15544 | CGCTACCGCGACGAA CAGCCACC ACG GGTGGCCG ACTACATCAAGGCCA TERM 4534 5771350 - 5771331 - g 72 -13.6 -2.71712 | overlap 5771330 CCGTTGCGCTGAAAT CCTGGTCG ACGG CGACCAGG CGTTCGAAGTACGCC Pput_5136 5770171 - 5771418 + | diaminopimelate decarboxylase dapF 5771423 - 5772253 + | diaminopimelate epimerase Pput_5138 5772267 - 5772977 + | hypothetical protein TERM 4535 5773033 - 5772983 - g 71 -9.7 -3.73775 | gap 1, opp_overlap 5773027 GGTACGCTGATGAAA CGCCAGCTGGAGGCTTATTGCGCA CACC TGCGCAACGAGCG-CCAGGTGTCG GAGCACACCTTGCTG xerC 5772977 - 5773876 + | site-specific tyrosine recombinase XerC Pput_5140 5773873 - 5774568 + | HAD family hydrolase TERM 4536 5774711 - 5774729 + T 100 -11.6 -5.0538 | opp_overlap 5774711 CACAGGCGTAAAAAA GCCCGCAG CGA CGGCGGGC TTTTTTGCGATCAGC TERM 4537 5774729 - 5774711 - T 100 -11.6 -5.04385 | opp_overlap 5774711 CACAGGCGTAAAAAA GCCCGCAG CGA CGGCGGGC TTTTTTGCGATCAGC Pput_5141 5775077 - 5774748 - | hypothetical protein TERM 4538 5775468 - 5775489 + r 75 -5.7 -4.58395 | opp_overlap 5775470, overlap 5775469 5775470 AAAAACTGGCAAAAA AATGCCCGG CAAG CCGGGCAAA TTTTTACCGCGTCGC TERM 4539 5775487 - 5775470 - R 100 -12.7 -5.4477 | opp_overlap 5775469 5775468 5775470 AAACTGGCAAAAAAA TGCCCGG CAAG CCGGGCA AATTTTTACCGCGTC TERM 4540 5775470 - 5775487 + r 73 -12.7 -2.60508 | opp_overlap 5775470, overlap 5775469 5775468 AAACTGGCAAAAAAA TGCCCGG CAAG CCGGGCA AATTTTTACCGCGTC Pput_5142 5776838 - 5775507 - | ammonium transporter Pput_5143 5777224 - 5776886 - | nitrogen regulatory protein P-II TERM 4541 5777991 - 5777959 - g 72 -4.2 -4.58283 | gap 2, overlap 5777961 GAAGCCTTGGAAAAA CAGGT--AGCCGAGCT GGA AGCCCGGCTGAACCCA ACTTCACAGGATGAA Pput_5144 5777608 - 5778009 + | hypothetical protein Pput_5145 5778010 - 5778363 + | hypothetical protein Pput_5146 5780392 - 5778317 - | Sel1 domain-containing protein TERM 4542 5780180 - 5780204 + g 77 -13.6 -3.37071 | opp_overlap 5780180 GCACGCGTCAATCCA GGCTCTGAGC ACTTG GCTCAGGGCC TTGTCACTCAGGTTT Pput_5147 5780649 - 5781035 + | ATPase with chaperone activity-like protein Pput_5148 5781032 - 5781388 + | hypothetical protein TERM 4543 5782048 - 5782030 - f 71 -6.6 -4.28361 | overlap 5782031 CGAAGCCCATGAAAA CGCAGGGA AAA CCCCTGCC TTGAAAAACCACGAC Pput_5149 5782150 - 5783640 + | Mg chelatase, subunit ChlI Pput_5150 5784076 - 5783708 - | response regulator receiver protein TERM 4544 5783784 - 5783765 - G 71 -5.6 -4.3739 | overlap 5783766 CACCTCTTCAGAAAA CGGCTTGC CCAG GCAGGCCA GTGCCCCAAGGCCCA TERM 4545 5783962 - 5783934 - G 71 -9.5 -3.70722 | TCCAGCAACACACAA CCCGCCTCGCC CGCCAGT GGCGAGGCCAG GAATGCGTGCCCGGC Pput_5151 5785065 - 5784073 - | response regulator receiver protein TERM 4546 5786950 - 5786960 + G 88 -8.2 -4.72272 | TGCATGGCAAGACGG CGGG CAA CCCG TTTTTCATCAACCAG TERM 4547 5789664 - 5789612 - g 74 -4.7 -4.63218 | gap 1 CCTGGCCGAAGAAAA CCAGATCCGCACCCAGATGGAGGC TGAGTT GCGCCGCTC-GCGTGCGGAACTGG CGCGCAGTGCGCACT Pput_5152 5785305 - 5790353 + | ATPase domain-containing protein TERM 4548 5790380 - 5790417 + T 95 -17.1 -3.53012 | gap 1, opp_overlap 5790380, overlap 5790353 5790351 CTGTTCGCGGGTAAA CCCGCGCCTACAGTCGGC GCG GCC-ATTGTAGGGGCGGG TTTACCCGCGAAGAG TERM 4549 5790417 - 5790380 - T 88 -14.9 -3.53012 | gap 1, opp_overlap 5790353 5790351 5790380 CTGTTCGCGGGTAAA CCCGCGCCTACAGTCGGC GCG GCC-ATTGTAGGGGCGGG TTTACCCGCGAAGAG Pput_5153 5791076 - 5790450 - | isochorismatase hydrolase Pput_5154 5791512 - 5791150 - | helix-turn-helix domain-containing protein TERM 4550 5792107 - 5792121 + G 71 -11.4 -3.53012 | opp_overlap 5792100 TGGAATTACGTGGAG CGCCTG GCA CAGGCG TTTCCCGAAGCCAAG Pput_5155 5791633 - 5792679 + | AraC family transcriptional regulator Pput_5156 5792908 - 5794695 + | potassium efflux system protein Pput_5157 5795383 - 5795676 + | hypothetical protein TERM 4551 5795801 - 5795828 + T 83 -11.2 -3.89881 | opp_overlap 5795801 ACAGCAAACAAAAAA GGCCGGCTCCCT ATAG AGAGAGCCAGCC TTTGTGCGCGTTGCT TERM 4552 5795828 - 5795801 - T 100 -15.6 -5.69793 | opp_overlap 5795801 ACAGCAAACAAAAAA GGCCGGCTCCCT ATAG AGAGAGCCAGCC TTTGTGCGCGTTGCT Pput_5158 5796482 - 5795853 - | isochorismatase hydrolase TERM 4553 5796839 - 5796815 - g 71 -5.5 -4.27584 | overlap 5796816 5796819 ATGCCCAAGTCAAAA CTCAGCCGGCG AAT CGCCGACCTTG AAGACCGCCTGGGTG Pput_5159 5796719 - 5797630 + | LysR family transcriptional regulator TERM 4554 5797637 - 5797653 + F 70 -11.5 -3.02144 | ATGGCTTGAGTGCCT GGCTGGC TGA GCCGGCC TCTTCGCGGGCCTGC TERM 4555 5798267 - 5798247 - g 73 -11.1 -3.5627 | AGATGATGGTGGAAA CCCCGGTGT TCG ACACCGGTG ACAAACGCCTGCACC TERM 4556 5798334 - 5798290 - g 75 -13.7 -3.04144 | gap 2, opp_overlap 5798323 5798333, overlap 5798316 5798317 CCTGCACCCGGAATA CGCCA-CC-GGCTGGTGGGTG GAAAA CACCGACCAGCCCGACTGGCG CCTGCAGGCCGGGCG TERM 4557 5798609 - 5798580 - g 76 -6.3 -4.4017 | gap 1, overlap 5798581 GCAACCTGTACAAAA CCCGCGATACCGGC AAC GCCAGCGCCG-GGG CGATCGACACCCTCG Pput_5160 5797838 - 5799100 + | outer membrane porin TERM 4558 5799611 - 5799629 + G 75 -12.4 -3.61178 | GGTGGTGGTGAGCAT GGTCGGCC CGT GGCTGACC TTTGCCCTGAATGCC Pput_5161 5799102 - 5800700 + | protein of unknown function DUF894, DitE TERM 4559 5800749 - 5800732 - T 72 -10.5 -3.53012 | opp_overlap 5800732 CCTTTCGCGGGTAAA CCCGCCC GTAG GAGCGGG TTTACCCGCGAAAGG TERM 4560 5800806 - 5800788 - T 93 -8.1 -5.2696 | TGAAAACTCAAAAAA GGGGCCA GATAT TGACCCC CGCTCTTCACATCAG Pput_5162 5802810 - 5800828 - | amidohydrolase 3 TERM 4561 5802562 - 5802613 + g 72 -7.8 -4.11216 | gap 1, opp_overlap 5802577, overlap 5802546 GGCCTCGGCGTCGCT GCCCACGGCGA-TGAAGCGGCCGTC CTT GATGGCGACGGCGGTCGCGGTGGGC TTTTCGCGGTCAACG TERM 4562 5802944 - 5802999 + r 100 -34.5 -3.55622 | gap 1, opp_overlap 5802957, overlap 5802945 TGCCTGGGCCGCCCT C-TTCGCGGGTAAACCCGCTCCTACA ACGTC TGTAGGAGCGGGTTTACCCGCGAATG TTTCCCACAATTACC TERM 4563 5802945 - 5802997 + r 100 -38.2 -3.35522 | opp_overlap 5802957, overlap 5802944 GCCTGGGCCGCCCTC TTCGCGGGTAAACCCGCTCCTACA ACGTC TGTAGGAGCGGGTTTACCCGCGAA TGTTTCCCACAATTA TERM 4564 5802985 - 5802957 - R 100 -19.7 -3.53012 | opp_overlap 5802945 5802944 CTCTTCGCGGGTAAA CCCGCTCCTACAA CGT CTGTAGGAGCGGG TTTACCCGCGAATGT Pput_5163 5803828 - 5803010 - | alpha/beta hydrolase fold Pput_5164 5804177 - 5803869 - | hypothetical protein TERM 4565 5804255 - 5804287 + r 74 -10.4 -3.69836 | overlap 5804247 5804257 GATAGGTGTGCTGCC CTGGGCGGGCACCG ATTGG CGGTGCCCGCGGCG TTTGCGCTTACTTGT Pput_5165 5804924 - 5804295 - | isochorismatase hydrolase Pput_5166 5805246 - 5806673 + | cyclic nucleotide-regulated small mechanosensitive ion channel TERM 4566 5806701 - 5806758 + T 100 -19.1 -3.53012 | opp_overlap 5806701 CTCTTCGCGGGTAAA CCCGCGCCTACAAGTTGTCCACCGCCT GAAA GGGCTGTGGTGAACCTGTAGGAGCGGG TTTACCCGCGAAGAG TERM 4567 5806758 - 5806701 - T 100 -20.6 -3.53012 | opp_overlap 5806701 CTCTTCGCGGGTAAA CCCGCGCCTACAAGTTGTCCACCGCC TGAAAG GGCTGTGGTGAACCTGTAGGAGCGGG TTTACCCGCGAAGAG Pput_5167 5808218 - 5806782 - | FAD dependent oxidoreductase TERM 4568 5808097 - 5808113 + g 86 -15.1 -3.55444 | AATTTGTTCTTGTTG GGGCCGC AGG GCGGCCC TTTCGCGGGTAAACC TERM 4569 5808176 - 5808127 - G 100 -20.9 -3.53012 | CCTTTCGCGGGTAAA CCCGCTCCTACAGGGGTCG GTGTCGCTTGGA CGAACCCTGTAGGAGCGGG TCTACCCGCGAACCG Pput_5168 5809716 - 5808226 - | aldehyde dehydrogenase TERM 4570 5810008 - 5809971 - g 70 -12 -3.14344 | gap 1, opp_overlap 5809969 5809971, overlap 5809974 GAGCGCGGTCAGCAA GCAGGTGGCGCAGC-TG GAAGA CATGCTGCGCCACCACC TGTTCCTGCGCATCC TERM 4571 5809971 - 5810008 + G 70 -12 -3.14051 | gap 1, opp_overlap 5809971 5809974, overlap 5809969 GAGCGCGGTCAGCAA GCAGGTGGCGCAGC-TG GAAGA CATGCTGCGCCACCACC TGTTCCTGCGCATCC TERM 4572 5810005 - 5809974 - g 81 -16.7 -2.77899 | gap 1, opp_overlap 5809971 5809969, overlap 5809971 CGCGGTCAGCAAGCA GGTGGCGCAGC-TG GAAGA CATGCTGCGCCACC ACCTGTTCCTGCGCA Pput_5169 5809852 - 5810742 + | LysR family transcriptional regulator TERM 4573 5810820 - 5810762 - f 100 -24.7 -3.53012 | gap 1, opp_overlap 5810762 CTCTTCGCGGCTAAA GCCGCTCCTACGGGGCCCTGCGCAAGAC CCCA ACCTTGCAC-GGTCCCTGTAGGAGCGGC TTTAGCCGTGAAACG TERM 4574 5810762 - 5810820 + F 100 -23.3 -3.57144 | gap 1, opp_overlap 5810762 CTCTTCGCGGCTAAA GCCGCTCCTACGGGGCCCTGCGCAAG ACCCCAAC CTTGCAC-GGTCCCTGTAGGAGCGGC TTTAGCCGTGAAACG TERM 4575 5811808 - 5811769 - g 76 -10.7 -3.72695 | gap 1, overlap 5811770 5811805 AGGCCCTGCAGGAAA CGGTCGCCTTCCGCGACC AGCAA GGCCGC-GAAGGCAGCCA CACCGCGCGCTTTGG TERM 4576 5811888 - 5811830 - g 75 -14.5 -2.71712 | gap 1, overlap 5811805 5811829 5811837 GCGCTTTGGCGAAAT CGAGCAACGCGGCGCGGCGCTGACG-CC GAAA GGTCGCCAGCTCTACGACAAGTTGCTCG ACGCTACCCGCGCTG Pput_5170 5810946 - 5812340 + | hypothetical protein TERM 4577 5812389 - 5812342 - T 100 -35.8 -3.64703 | opp_overlap 5812329, overlap 5812343 TGGGCTCGATGTAAA TCTGCACCGGCCTCTTCGCGGG CGAG CCCGCGAAGAGGCCGGTGCAGG TGATCAAAGAGGCGG TERM 4578 5812388 - 5812343 - T 100 -39.3 -2.78679 | opp_overlap 5812329, overlap 5812342 GGGCTCGATGTAAAT CTGCACCGGCCTCTTCGCGGG CGAG CCCGCGAAGAGGCCGGTGCAG GTGATCAAAGAGGCG Pput_5171 5813319 - 5812393 - | LysR family transcriptional regulator TERM 4579 5813258 - 5813232 - G 70 -7.3 -4.03234 | gap 1 TTTGGGTGATAGAAA GCT-CTTCGCCC GCAC GGGTGAAGGAGC TTAGCCGCGCGGCAG Pput_5172 5813477 - 5814865 + | multidrug efflux protein NorA Pput_5173 5816716 - 5815049 - | diguanylate cyclase/phosphodiesterase TERM 4580 5816944 - 5816925 - H 77 -7.9 -4.3898 | ATTAGGCGGACAAAA GTCTGAC TCAGAC GTCAGAC GGTCGCGCCACAACG TERM 4581 5817508 - 5817478 - g 70 -7.5 -4.10007 | gap 1, overlap 5817467 5817479 AGAAGCCCTGGAAAA GGCGCGCAACCCGC GCGA GCAGACCGC-CGCC ATCGTCTACACCCAC TERM 4582 5818295 - 5818273 - g 78 -9.8 -4.10161 | opp_overlap 5818286, overlap 5818285 CACCACCCTGGAAAA GCTCGGCAAC TAC GCCACCGAGC GCGGCATTTCGATGT Pput_5174 5817014 - 5819023 + | ATP-dependent DNA helicase Rep Pput_5175 5819088 - 5819660 + | xanthine phosphoribosyltransferase Pput_5176 5821630 - 5819771 - | Acetyl-CoA hydrolase-like protein TERM 4583 5821840 - 5821813 - R 100 -9.8 -5.8187 | overlap 5821817 CAGGCAACAAAAAAA CAAAGCCCGCCA TCAA CGGCGGGCCTCA TGCAATTCAGCTGTA TERM 4584 5821836 - 5821817 - R 100 -12.8 -5.33131 | overlap 5821813 CAACAAAAAAACAAA GCCCGCCA TCAA CGGCGGGC CTCATGCAATTCAGC Pput_5177 5822280 - 5821858 - | cytochrome c5 Pput_5178 5823016 - 5822417 - | XRE family transcriptional regulator dadX 5824146 - 5823073 - | alanine racemase Pput_5180 5825595 - 5824291 - | D-amino acid dehydrogenase small subunit TERM 4585 5826027 - 5826037 + G 76 -8.2 -4.11216 | TACCTTCGAGGAGTT CCGC CGC GCGG TTTTGAAGCTGCCCC Pput_5181 5825752 - 5826240 + | AsnC family transcriptional regulator Pput_5182 5826596 - 5826243 - | hypothetical protein Pput_5183 5826741 - 5828033 + | FAD dependent oxidoreductase Pput_5184 5828464 - 5828234 - | hypothetical protein Pput_5185 5828583 - 5830073 + | GntR family transcriptional regulator Pput_5186 5830134 - 5831687 + | phospholipase D/transphosphatidylase Pput_5187 5832863 - 5831724 - | major facilitator transporter TERM 4586 5831900 - 5831865 - G 71 -11.2 -3.44848 | gap 1, overlap 5831863 CGGCCCGAGCAAACA GCCAATACCC-CACAGC TGG GCCACGTGGGCATTGGC CCGTACCAACTCATC Pput_5188 5834554 - 5832974 - | aldehyde dehydrogenase Pput_5189 5834664 - 5835023 + | protein of unknown function DUF861, cupin_3 Pput_5190 5835050 - 5835310 + | hypothetical protein TERM 4587 5835333 - 5835354 + T 100 -13.7 -5.78622 | opp_overlap 5835333 GCAGCCCAAAAAAAA CCCGCGTCC TTTC GGATGCGGG TTTTTTTTCAGGTCG TERM 4588 5835354 - 5835333 - T 100 -11.5 -5.78622 | opp_overlap 5835333 GCAGCCCAAAAAAAA CCCGCGTCC TTTC GGATGCGGG TTTTTTTTCAGGTCG rpmG 5835533 - 5835378 - | 50S ribosomal protein L33 rpmB 5835781 - 5835545 - | 50S ribosomal protein L28 TERM 4589 5837598 - 5837563 - g 71 -8.2 -3.85704 | gap 1 CCACCAACGACCAAA GCGTGCGCAGCCGGCTG TAC CAGCAGGC-GCAGACAC TGATCCAGCAGCAGG Pput_5193 5836143 - 5837732 + | extracellular solute-binding protein TERM 4590 5837760 - 5837816 + T 95 -18.1 -3.53012 | gap 1, opp_overlap 5837760 CTCTTCGCGGGTAAA CCCGCTCCTACAG-GACAGCGCCAGC CTGGCA GTTGACGCTACCCCTGTAGGAGCGGG TTTACCCGCGAAAGG TERM 4591 5837816 - 5837760 - T 100 -23.2 -3.53012 | gap 1, opp_overlap 5837760 CTCTTCGCGGGTAAA CCCGCTCCTACA-GGACAGCGCCAGCC TGGC AGTTGACGCTACCCCTGTAGGAGCGGG TTTACCCGCGAAAGG radC 5838574 - 5837867 - | DNA repair protein RadC Pput_5195 5838608 - 5839885 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 4592 5840319 - 5840303 - g 84 -13.7 -3.75437 | AAGCATTCGACGAAA GCCAGCG TGG CGCTGGC GGCTTCGGCCACTCC dut 5839891 - 5840346 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4593 5840938 - 5840922 - g 83 -12.3 -4.07687 | opp_overlap 5840920 AGGCCGCGTGGAAAA GGTCGAG ATC CTCGACC GCTACTTCCAGCAGA Pput_5197 5840458 - 5841858 + | phosphomannomutase Pput_5198 5841889 - 5842794 + | acetylglutamate kinase TERM 4594 5842833 - 5842869 + T 93 -16.6 -3.53012 | opp_overlap 5842833 CTCTTCGCGGGTAAA CCCGCTCCTACAAAGG AAATC CCCATGTAGGAGCGGG TTTACCCGCGAAAGG TERM 4595 5842869 - 5842833 - T 100 -19.5 -3.53012 | opp_overlap 5842833 CTCTTCGCGGGTAAA CCCGCTCCTACAAAGGA AAT CCCCATGTAGGAGCGGG TTTACCCGCGAAAGG TERM 4596 5842909 - 5842932 + T 100 -12.4 -4.90266 | opp_overlap 5842909 GGCGGCACAAAAAAA GGCGACCCTC TGAA GAAGGTCGCC TTTTTCATTCCTGGG TERM 4597 5842932 - 5842909 - T 100 -14.6 -5.60993 | opp_overlap 5842909 GGCGGCACAAAAAAA GGCGACCCTC TGAA GAAGGTCGCC TTTTTCATTCCTGGG pyrE 5843595 - 5842954 - | orotate phosphoribosyltransferase TERM 4598 5844138 - 5844106 - g 71 -12.7 -3.06815 | AGCGTCGCGAATACA TCTACTGCGGCTCGT TCT ACGTGGCGCAGCAGA AGCTCGACATCAAAA TERM 4599 5844170 - 5844155 - g 80 -6.1 -4.8048 | GCTCGACATCAAAAA CTGGC GTGACA GCCAG CAGTCGCCAGGCTTC Pput_5200 5843676 - 5844455 + | exodeoxyribonuclease III Xth TERM 4600 5844457 - 5844491 + T 100 -20.8 -3.72576 | opp_overlap 5844458 5844459, overlap 5844459 CGCTGACCATCTAAA AGGCCATTGGGGCTGC GTT GCAGCCCCAATGGCTA TTTGATCGGCCGCCA TERM 4601 5844490 - 5844458 - T 100 -22.1 -4.21194 | opp_overlap 5844457 5844459, overlap 5844459 GCTGACCATCTAAAA GGCCATTGGGGCTGC GTT GCAGCCCCAATGGCT ATTTGATCGGCCGCC TERM 4602 5844489 - 5844459 - T 100 -25.6 -3.12395 | opp_overlap 5844457 5844459, overlap 5844458 CTGACCATCTAAAAG GCCATTGGGGCTGC GTT GCAGCCCCAATGGC TATTTGATCGGCCGC TERM 4603 5844459 - 5844489 + T 100 -25.6 -3.44848 | opp_overlap 5844459 5844458, overlap 5844457 CTGACCATCTAAAAG GCCATTGGGGCTGC GTT GCAGCCCCAATGGC TATTTGATCGGCCGC Pput_5201 5844857 - 5844489 - | hypothetical protein TERM 4604 5844830 - 5844800 - G 73 -12.5 -3.22102 | overlap 5844798 5844801 AGAGGTGGCAGAACA TCGCCCATTGCCG GATTT CGGCATTGGGCGG GGTGATCGACAGGTT TERM 4605 5844829 - 5844801 - G 79 -16 -2.5294 | overlap 5844800 5844798 GAGGTGGCAGAACAT CGCCCATTGCCG GATTT CGGCATTGGGCG GGGTGATCGACAGGT rph 5845603 - 5844881 - | ribonuclease PH TERM 4606 5845336 - 5845379 + g 70 -11.7 -3.17392 | gap 1 TCAGGCGCTGGATTT CCAGGGTGCGGCCA-CCCTG CTTGC CACGGCTGGCCTCACGCTGG TTACGTTCGCCGGTG Pput_5203 5845832 - 5846695 + | hypothetical protein TERM 4607 5847315 - 5847284 - g 70 -10 -3.61398 | overlap 5847285 GCTGCTGTTGAAGAA GCAGCAGCAGCGTC ATGC GGCGCTGCTGAAGC AAATGATCGGCTAAA gmk 5846709 - 5847329 + | guanylate kinase TERM 4608 5847503 - 5847487 - f 88 -15.1 -3.53012 | opp_overlap 5847483 5847482 CCTTGTGTCGCGAAA GGGCCGC GAA GCGGCCC CAGCATTATTTGCAT TERM 4609 5847536 - 5847550 + F 86 -11.4 -4.07568 | ACGCTGAAATCCCGG GGCTGC TGT GCAGCC TTTTCGCGACACAAG Pput_5205 5847765 - 5847794 + | hypothetical protein Pput_5206 5849465 - 5847858 - | amino acid permease-associated region TERM 4610 5849352 - 5849381 + g 85 -14.3 -3.65002 | gap 1 CTGAGTGTTGCCCGC GTCGGCCGCCACAT CGG GTG-GGCGGCCGGC TTCTGTGTAATTGCT Pput_5207 5850286 - 5849519 - | peptidase C26 TERM 4611 5850193 - 5850166 - G 72 -13.4 -2.73875 | gap 1, opp_overlap 5850161 5850157, overlap 5850163 GGGCCGGCAAGATCA GTGGCAAGCCGGC AAA GCCGGC-TGCCTC GACATACTTGTCGCC Pput_5208 5851673 - 5850291 - | glutamate--putrescine ligase TERM 4612 5850817 - 5850838 + g 80 -5.9 -4.77165 | gap 1 TGCAGCGGATCGTCA CTGGCGAAGA TGT TCTT-GCCGG TTTTCTTGTCCAGCA Pput_5209 5851702 - 5852751 + | LysR family transcriptional regulator rpoZ 5852992 - 5853255 + | DNA-directed RNA polymerase subunit omega TERM 4613 5853795 - 5853777 - g 72 -4.4 -4.56597 | overlap 5853779 CTGTCTGGCGAAAAA CGCCGGCG CAT CGCCAAGG AAACCCTCGAGATCT Pput_5211 5853315 - 5855423 + | (p)ppGpp synthetase I, SpoT/RelA Pput_5212 5855447 - 5855827 + | putative endoribonuclease L-PSP TERM 4614 5855833 - 5855857 + F 82 -15.7 -2.81547 | opp_overlap 5855806, overlap 5855830 CATCGAATGATGCCC TGGTGACGGGC CCT GCCCGTCACCC TCCTTCCTCTGCAAG Pput_5213 5855884 - 5856615 + | hypothetical protein Pput_5214 5857642 - 5856785 - | NAD-dependent epimerase/dehydratase TERM 4615 5857058 - 5857043 - G 76 -10.4 -3.96148 | GGCCTGCAGCAGAAA CGCCAG CAGG CTGGCG GCATCTTCGGCATGA Pput_5215 5857832 - 5858806 + | TonB-system energizer ExbB type-1 Pput_5216 5858810 - 5859238 + | biopolymer transport protein ExbD Pput_5217 5859235 - 5859966 + | TonB family protein Pput_5218 5860061 - 5860987 + | LysR family transcriptional regulator Pput_5219 5860991 - 5863069 + | ATP-dependent DNA helicase RecG Pput_5220 5863148 - 5864551 + | putative signal transduction protein Pput_5221 5865055 - 5864681 - | hypothetical protein TERM 4616 5865178 - 5865147 - R 88 -13.6 -3.85698 | overlap 5865153 TTTTGCCTGCAGAAA GCACAACGGGCGCC TTGA GGCGCCCGCTTGGC CGACACTGGGGTTGT TERM 4617 5865172 - 5865153 - R 95 -16.4 -3.64915 | overlap 5865147 CTGCAGAAAGCACAA CGGGCGCC TTGA GGCGCCCG CTTGGCCGACACTGG Pput_5222 5865503 - 5865204 - | histone family protein DNA-binding protein TERM 4618 5865621 - 5865646 + r 74 -11.1 -3.28712 | gap 1, opp_overlap 5865607, overlap 5865622 ATGGCACGAGCTCAG GGGCCGCGCCAG TAT CTGG-GCGGCCA TTGTGCAGGCAACAA TERM 4619 5865622 - 5865645 + r 78 -14.6 -2.57132 | gap 1, opp_overlap 5865607, overlap 5865621 TGGCACGAGCTCAGG GGCCGCGCCAG TAT CTGG-GCGGCC ATTGTGCAGGCAACA Pput_5223 5866839 - 5865691 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pput_5224 5867023 - 5866856 - | rubredoxin-type Fe(Cys)4 protein TERM 4620 5867590 - 5867614 + G 84 -15.7 -3.28712 | CCTGGAATCCTTGGG CAGCCGCTCGC TGG GCGAGCTGCTG TTCTGCGACCAGGCG Pput_5225 5867249 - 5867806 + | chorismate lyase ubiA 5867806 - 5868696 + | 4-hydroxybenzoate octaprenyltransferase Pput_5227 5869188 - 5868817 - | hypothetical protein Pput_5228 5869361 - 5870050 + | two component transcriptional regulator Pput_5229 5870099 - 5871406 + | PAS/PAC sensor signal transduction histidine kinase TERM 4621 5871515 - 5871534 + F 100 -13.6 -5.77988 | TACATTGGATCCCCT GTGCCAGC AAAA GCTGGCAC TTTTTTTCTCTCTAT Pput_5230 5871580 - 5872920 + | hypothetical protein TERM 4622 5873032 - 5873016 - T 82 -13.7 -3.53012 | CCTTGTGTCGCGAAA GGCCTGC GAA GCAGGCC CGGCAATCTCAAGGG Pput_5231 5873937 - 5873041 - | peptidase M23B Pput_5232 5874968 - 5874084 - | response regulator receiver protein TERM 4623 5875112 - 5875093 - R 100 -16.4 -4.55798 | GACCGCAAACGAAAA CGCCCGGC CAAG GCCGGGCG TCGATGCTCGGGAGC Pput_5233 5875902 - 5875132 - | phosphate uptake regulator, PhoU TERM 4624 5875969 - 5875953 - R 84 -13.7 -3.57144 | opp_overlap 5875957 GGGTTCACCCGCAAA CACCGGC AAC GCCGGTG CCAGACACCGAGGTG Pput_5234 5876837 - 5876004 - | phosphate ABC transporter, ATPase subunit TERM 4625 5876895 - 5876871 - R 72 -9.9 -3.54459 | TCAAGTCGTTTCAAA GGGCCGCCC GGCTTAA GGGCGGCAC GCTTGCAATCAGGGT Pput_5235 5878580 - 5876910 - | phosphate ABC transporter, inner membrane subunit PstA TERM 4626 5877868 - 5877856 - G 91 -9.1 -4.56597 | opp_overlap 5877866 CTGTCGCGGGAAAAA GCCTG GTG CAGGC CGGTCAGGCGGTCTT Pput_5236 5880886 - 5878598 - | binding-protein-dependent transport systems inner membrane component TERM 4627 5880083 - 5880061 - G 75 -13.4 -3.04144 | opp_overlap 5880064, overlap 5880063 CGCGCAGGCTGAACA CATCGGCCGT GGC ACGGCCGTTG ATCACGTACAGCCAG TERM 4628 5880064 - 5880080 + g 76 -13.7 -3.16564 | opp_overlap 5880063 5880061 GCAGGCTGAACACAT CGGCCGT GGC ACGGCCG TTGATCACGTACAGC TERM 4629 5880986 - 5881016 + r 82 -13.3 -3.47896 | gap 1, opp_overlap 5880991, overlap 5880983 5880989 GACTGGAAATTCGTG GAAGAGGCCGG-GC TGTG GCACCGGCCTCCTC TTAATTACTTACTTC TERM 4630 5880989 - 5881013 + r 75 -13.6 -2.57354 | gap 1, opp_overlap 5880991, overlap 5880986 5880983 TGGAAATTCGTGGAA GAGGCCGG-GC TGTG GCACCGGCCTC CTCTTAATTACTTAC Pput_5237 5882023 - 5881025 - | phosphate binding protein TERM 4631 5882166 - 5882224 + r 75 -11.7 -3.53012 | gap 1, opp_overlap 5882166 CTCTTCGCGGCTAAA GCCGCTCCTACA-GGTTCGGTGTCAGCC TTGA GGCCTGTGCAAAACCCTGTAGGAGCGGC TTTAGCCGCGAAGAG TERM 4632 5882224 - 5882166 - R 70 -9.5 -3.53012 | gap 1, opp_overlap 5882166 CTCTTCGCGGCTAAA GCCGCTCCTACA-GGTTCGGTGTCAGCC TTGA GGCCTGTGCAAAACCCTGTAGGAGCGGC TTTAGCCGCGAAGAG Pput_5238 5883549 - 5882260 - | major facilitator transporter Pput_5239 5883911 - 5884309 + | thioesterase superfamily protein Pput_5240 5884381 - 5885277 + | aldose 1-epimerase TERM 4633 5885276 - 5885286 + T 76 -6.8 -4.63486 | GTTGTGAAAATATCT GAGC CCT GCTC TTTTATTACCGGCCT Pput_5241 5885932 - 5885399 - | hypothetical protein TERM 4634 5885938 - 5885967 + r 86 -15.1 -3.30441 | opp_overlap 5885938 AGGCACGCATGGAAA TGCTCGGCAACTC GAAT GAATTGCCGAGCA TTCTAACCAGTAATC TERM 4635 5885967 - 5885938 - R 100 -17.3 -3.66999 | opp_overlap 5885938 AGGCACGCATGGAAA TGCTCGGCAACTC GAAT GAATTGCCGAGCA TTCTAACCAGTAATC Pput_5242 5886226 - 5885981 - | transglycosylase-associated protein TERM 4636 5886249 - 5886289 + r 80 -14.2 -3.01924 | gap 1, opp_overlap 5886257, overlap 5886257 CCTCTGCAGTGAAGT TGG-AACAAGCCAAAGCCT AGAC GGGCTTCGGCTTGTTGCCA TATTCAGAGGGCATG TERM 4637 5886280 - 5886257 - R 74 -10.3 -3.65314 | opp_overlap 5886257 5886249 GTGAAGTTGGAACAA GCCAAAGCC TAGACG GGCTTCGGC TTGTTGCCATATTCA Pput_5243 5887417 - 5886335 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Pput_5244 5887919 - 5887428 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 4638 5887997 - 5887960 - H 91 -12.7 -4.07568 | opp_overlap 5887967, overlap 5887964 5887967 TCTGGCGCGCTAAAA GCAACAAGCCACGCAGG TGGG CCGGCGTGGCTTGTCAT ACGGATTCTGAATCG TERM 4639 5887993 - 5887964 - H 100 -17.9 -3.66908 | opp_overlap 5887967, overlap 5887960 5887967 GCGCGCTAAAAGCAA CAAGCCACGCAGG TGGG CCGGCGTGGCTTG TCATACGGATTCTGA TERM 4640 5887990 - 5887967 - H 93 -13.8 -3.965 | opp_overlap 5887967, overlap 5887964 5887960 CGCTAAAAGCAACAA GCCACGCAGG TGGG CCGGCGTGGC TTGTCATACGGATTC TERM 4641 5887967 - 5887990 + H 82 -13.8 -3.41527 | opp_overlap 5887967 5887964 5887960 CGCTAAAAGCAACAA GCCACGCAGG TGGG CCGGCGTGGC TTGTCATACGGATTC TERM 4642 5888624 - 5888604 - g 78 -6.7 -4.54821 | opp_overlap 5888583 ATTTCAAGCAGAAAA CGGCCATTG CCT CTGTGGCCG CATACGGTGCTGCAG Pput_5245 5888189 - 5888815 + | hypothetical protein Pput_5246 5889733 - 5888807 - | LysR family transcriptional regulator aspA 5889895 - 5891331 + | aspartate ammonia-lyase TERM 4643 5891392 - 5891414 + F 100 -11.3 -5.81412 | gap 1, overlap 5891406 TCTCAACCTTTCCAA GGCCCG-AGC GCTT GCTTCGGGCC TTTTTTTTGCCTGAA TERM 4644 5891482 - 5891464 - f 70 -11.6 -3.01924 | opp_overlap 5891464 5891456 CAGGCCTTCGCAACA CCCGGCCG CGC CGGCAGGG TATGTGGTTTGCCTG TERM 4645 5891464 - 5891482 + F 71 -11.6 -3.06483 | opp_overlap 5891464, overlap 5891456 CAGGCCTTCGCAACA CCCGGCCG CGC CGGCAGGG TATGTGGTTTGCCTG TERM 4646 5892524 - 5892541 + G 73 -6.3 -4.3534 | gap 1, overlap 5892517 CTTCCAGCGCTGGAG TGGCGTGG CGC CCA-GCCA TTTTCGTGGTTGACC Pput_5248 5891562 - 5892554 + | helix-turn-helix domain-containing protein Pput_5249 5892851 - 5893894 + | histone deacetylase superfamily protein Pput_5250 5893894 - 5894997 + | extracellular solute-binding protein TERM 4647 5895001 - 5895031 + T 91 -11.3 -4.39002 | gap 2, overlap 5895007 TCCGGTACCTGATGT TGAACCGGGGGCTGC TTT GCAGCCCCC--TTCA TTTTCTCCAGACTTT TERM 4648 5895007 - 5895027 + T 100 -18.3 -3.75115 | overlap 5895001 ACCTGATGTTGAACC GGGGGCTGC TTT GCAGCCCCC TTCATTTTCTCCAGA Pput_5251 5896558 - 5895029 - | GntR family transcriptional regulator TERM 4649 5895381 - 5895369 - G 76 -9.1 -4.08394 | ATATGCCGCTGAAAA TGGCC ACG GGCCA TGAACTCGGCCATCA TERM 4650 5895561 - 5895533 - G 77 -14.5 -2.87881 | overlap 5895535 GAAGGTGCCGACATA CAGCACCCGCCCG TGC CGGTCGAGCGCTG CCAGCGGGGCCAGCG TERM 4651 5896883 - 5896910 + G 74 -5.4 -4.56597 | CACTGTTGGTATTCC CCGGCGCCGATG CCTA TGTCAGCCCCGG TTTTTACCCAAGCAA Pput_5252 5896648 - 5897277 + | FMN-binding negative transcriptional regulator Pput_5253 5897289 - 5897735 + | GCN5-related N-acetyltransferase Pput_5254 5897743 - 5898414 + | GCN5-related N-acetyltransferase TERM 4652 5898543 - 5898526 - T 100 -10.5 -5.60993 | TCCGGCACAAAAAAA GGGGAGC ATCC GCCCCCC AGAGGTTAACCACTT Pput_5255 5900384 - 5898576 - | pyruvate carboxylase subunit B Pput_5256 5901811 - 5900396 - | acetyl-CoA carboxylase TERM 4653 5902834 - 5902870 + G 95 -13 -4.26351 | gap 1, overlap 5902835 CTGGTGCGTGGTGCA GGCCAAGGCCAAGCGGC AGTC GCCGGT-GGCCTTGGCG TTTCTTGCATTCATC TERM 4654 5902835 - 5902869 + G 86 -16.5 -3.15087 | gap 1, overlap 5902834 TGGTGCGTGGTGCAG GCCAAGGCCAAGCGGC AGTC GCCGGT-GGCCTTGGC GTTTCTTGCATTCAT Pput_5257 5902001 - 5902963 + | LysR family transcriptional regulator TERM 4655 5903028 - 5903060 + T 76 -5 -4.7871 | gap 2, overlap 5903034 GTCGCAATAGCTCTC GATCGCGCGGCGGTAT TCC ATAC-GTCGC-TGATC TTTTTCCTGCTGCTT Pput_5258 5904202 - 5903336 - | RpiR family transcriptional regulator Pput_5259 5904306 - 5905748 + | glucose-6-phosphate 1-dehydrogenase uvrD 5905963 - 5908149 + | DNA-dependent helicase II Pput_5261 5908241 - 5909134 + | import inner membrane translocase, subunit Tim44 TERM 4656 5909174 - 5909157 - f 91 -14.1 -3.76232 | opp_overlap 5909157 GTGCTAAACAGAGAA CCCCGGG CTTG CCCGGGG TTTTTGCTTTTGCCA TERM 4657 5909157 - 5909174 + F 100 -14.1 -5.0925 | opp_overlap 5909157 GTGCTAAACAGAGAA CCCCGGG CTTG CCCGGGG TTTTTGCTTTTGCCA Pput_5262 5909248 - 5909655 + | hypothetical protein TERM 4658 5909754 - 5909730 - T 91 -12.9 -4.14472 | TCAAGATCGTTAAAA TCGCCAGGC CTTCTGC GCCTGGCGA CATCGCTGTAGCCCC Pput_5263 5911578 - 5909818 - | sodium/hydrogen exchanger TERM 4659 5912343 - 5912316 - g 88 -8.4 -4.69053 | gap 1, overlap 5912317 CAGCAGCGAAGAAAA GCGCCGCT-TCCT GCA AGGCCAGCAGCGC CGGCAGATCCGCCAG Pput_5264 5911918 - 5912403 + | thioesterase superfamily protein Pput_5265 5913272 - 5912400 - | pyridoxamine kinase TERM 4660 5912889 - 5912907 + g 81 -10.2 -4.11216 | AAACTCACTGACTTC GGGCGGCA CGA TGCAGCCC TTTTCCGGGTGCCCC Pput_5266 5913393 - 5913785 + | hypothetical protein Pput_5267 5914757 - 5913786 - | cobalamin synthesis protein, P47K TERM 4661 5914121 - 5914140 + g 95 -10.8 -4.58395 | opp_overlap 5914136, overlap 5914107 CTGCTGGATCGATTC CAGGATTG TCGA CAATCCTG TTTTTCAAGAATGGG TERM 4662 5914330 - 5914350 + g 75 -11.9 -3.54424 | overlap 5914331 TTGAAAGCCTGCTGT TGAGCCTCT GGC AGAGGCTCG TTTCGAGCCATGGCC Pput_5268 5915424 - 5914798 - | hypothetical protein Pput_5269 5916629 - 5915421 - | cobalamin synthesis protein, P47K Pput_5270 5916744 - 5917124 + | hypothetical protein TERM 4663 5917110 - 5917131 + T 75 -2.1 -5.07652 | overlap 5917108 5917126 CATTGCAGCTTGATC GAGGGCTGC CGTT GATGCCTTC TTTTGTTTTGAAGGC Pput_5271 5917923 - 5917396 - | hypothetical protein TERM 4664 5917963 - 5917947 - H 90 -5 -5.40072 | GCTCCTGGAAAAAAA CCGGTC AAACG GGCCGG ACTGAGCCTTAGACG TERM 4665 5918006 - 5917984 - H 90 -14.9 -3.63627 | opp_overlap 5917977 GCCTTAGACGCCAAA TCCGCCTGC GGGTT GCAGGCGGA CCGGGAACGTGTTCT cls 5918056 - 5919495 + | cardiolipin synthetase Pput_5273 5920824 - 5919568 - | cyclopropane-fatty-acyl-phospholipid synthase Pput_5274 5920960 - 5922360 + | dihydrolipoamide dehydrogenase Pput_5275 5923479 - 5922472 - | transketolase, central region TERM 4666 5923401 - 5923433 + g 77 -14.1 -3.30338 | overlap 5923393 5923428 AACGGGTGGCCTGGC CCTCGGCAGCGATCG AAG CGATCATGGCCGAGG TTGTCAGGCGCTTCT Pput_5276 5924324 - 5923476 - | transketolase domain-containing protein Pput_5277 5925644 - 5924343 - | major facilitator transporter TERM 4667 5925312 - 5925289 - G 72 -3.7 -4.57209 | overlap 5925303 ATACCAAGCAGAAAA CGCAGGGCA TAAAAC TGCCAGGCG GTCTCAACAAAGGCG TERM 4668 5925703 - 5925681 - R 86 -14.9 -3.254 | overlap 5925679 TATCGATTCAGAACA GCGTCAGCC GCGCG GGCTGACGC AATGTGCATCAGTGA Pput_5278 5926461 - 5925712 - | short-chain dehydrogenase/reductase SDR Pput_5279 5926657 - 5927574 + | LysR family transcriptional regulator Pput_5280 5927821 - 5928444 + | methyltransferase type 12 TERM 4669 5928471 - 5928506 + T 72 -5.9 -4.41494 | overlap 5928473 GGAGCAGGAGCATTG CAGGCGGAGGCGGGG TGGACT CACCGCCTCCAACAG TTTTAATTAAAACTG Pput_5281 5930195 - 5928954 - | outer membrane porin TERM 4670 5930048 - 5930008 - G 77 -4 -4.83032 | gap 2 AGATCAAAGATAAAA CCCTGCGTCCACTCACGGGC ATG GCTC-TGAGT-GACACCAGG CGCAGTGAAATTGCG TERM 4671 5930353 - 5930323 - R 75 -11.1 -3.46336 | overlap 5930321 5930324 ATCCGAATCGAAAGA TGCCAAGACCCTG ATGCG CAGGGCCCTGGCC GGGATTTCAGCTGAA TERM 4672 5930352 - 5930324 - R 78 -14.6 -2.6732 | overlap 5930321 5930323 TCCGAATCGAAAGAT GCCAAGACCCTG ATGCG CAGGGCCCTGGC CGGGATTTCAGCTGA TERM 4673 5930397 - 5930370 - R 86 -14.2 -3.60627 | opp_overlap 5930369 GGATTTCAGCTGAAA GCCAGCACCGAA TTGG CTCAGTGCTGGC CTTGGCTTGGGATCA Pput_5282 5931339 - 5930410 - | dihydrodipicolinate synthetase Pput_5283 5932854 - 5931463 - | major facilitator transporter TERM 4674 5933338 - 5933352 + r 100 -4.3 -6.04419 | overlap 5933348 CGCACCTTTTGTTTT TTTCG GATTG CGAAA TTTTTTTGTTCTTTT Pput_5284 5933681 - 5933469 - | hypothetical protein TERM 4675 5933688 - 5933704 + r 72 -5.8 -4.37971 | overlap 5933689 TCGTAGCAAGTTGCG CTGCGC CGAGC GCGTAG TTTTCGTCCTATTTT Pput_5285 5933874 - 5933713 - | hypothetical protein TERM 4676 5934032 - 5934049 + H 86 -5.5 -5.32599 | overlap 5934033 5934034 AGGTGCGTGAAAAGT TTGTCCC TTGT GGGACGG TTTTTGTGTTTTATG Pput_5286 5934190 - 5934912 + | two component transcriptional regulator TERM 4677 5934982 - 5934996 + F 78 -4.2 -5.00616 | overlap 5934983 TGATTGTCTCTCAAG CGCTGA CGC TCAGCA TTTTTTGGGACGAGC Pput_5287 5935032 - 5936309 + | histidine kinase TERM 4678 5936455 - 5936443 - g 81 -2.6 -5.10208 | GAACCTCAACAAAAA GCGA AACGA CCGC TGCTGAAGAAGATAA Pput_5288 5936418 - 5937254 + | regulatory protein, IclR TERM 4679 5937882 - 5937869 - g 71 -9.5 -3.75738 | opp_overlap 5937867 CATCATCAGCAACAA CGCCG GCAA CGGCG AGATTGGTCTGGCCG Pput_5289 5937708 - 5938403 + | 3-oxoacid CoA-transferase, A subunit TERM 4680 5938875 - 5938855 - g 70 -11.9 -3.21099 | overlap 5938856 GTTCGTGATGATGAA CCACCTGAC CAA GTCAGGTGA AAGCAAGCTGGTGCC Pput_5290 5938412 - 5939053 + | 3-oxoacid CoA-transferase, B subunit TERM 4681 5939333 - 5939292 - T 86 -11 -4.08767 | opp_overlap 5939289 5939292 5939292 5939293, overlap 5939293 GGGAGGCTCGTAAAA GCGCTCGAT-GAGGAGAAGC GAGC GCTTCTCCTCTACCG-GCGA TAGTTTTAATTGCCC TERM 4682 5939332 - 5939293 - T 80 -14.5 -3.05046 | opp_overlap 5939292 5939292 5939289 5939293, overlap 5939292 GGAGGCTCGTAAAAG CGCTCGAT-GAGGAGAAGC GAGC GCTTCTCCTCTACCG-GCG ATAGTTTTAATTGCC TERM 4683 5939293 - 5939332 + T 72 -12.8 -2.50479 | opp_overlap 5939293 5939292, overlap 5939292 5939292 5939289 GGAGGCTCGTAAAAG CGCTCGATGAGGAGAAGC GAGC GCTTCTCCTCTACCGGCG ATAGTTTTAATTGCC Pput_5291 5941234 - 5939399 - | D-fructose-6-phosphate amidotransferase Pput_5292 5942014 - 5941238 - | DeoR family transcriptional regulator TERM 4684 5942178 - 5942155 - R 100 -14 -5.45652 | opp_overlap 5942155 AGCGCCAATAAAAAA GCCGACTTAT TCAC ATAAGTCGGC TTTCGATCGAAACGG TERM 4685 5942155 - 5942178 + r 86 -14 -3.64703 | opp_overlap 5942155 AGCGCCAATAAAAAA GCCGACTTAT TCAC ATAAGTCGGC TTTCGATCGAAACGG Pput_5293 5943572 - 5942205 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 4686 5942513 - 5942526 + g 75 -3.7 -4.74103 | overlap 5942506 CAGCCTTGGCCCCTT CACCC AGGT GGGCG TTTTTCAGTTCAACG TERM 4687 5942999 - 5943009 + g 71 -8.2 -3.9461 | CGGTCAGGTAATACT CGCC CTG GGCG TTGTTGTTCGACAGC TERM 4688 5943657 - 5943628 - R 100 -13.7 -5.32599 | opp_overlap 5943634, overlap 5943634 GAGAAAACAGAAAAA GAAAAAGGGTAGC CGAG GCTACCCTTTTAC TCAATCGCAACAGAA TERM 4689 5943634 - 5943651 + r 89 -11.3 -4.2828 | opp_overlap 5943634 5943628 ACAGAAAAAGAAAAA GGGTAGC CGAG GCTACCC TTTTACTCAATCGCA TERM 4690 5943651 - 5943634 - R 100 -11.3 -5.71295 | opp_overlap 5943634, overlap 5943628 ACAGAAAAAGAAAAA GGGTAGC CGAG GCTACCC TTTTACTCAATCGCA atpC 5944110 - 5943691 - | F0F1 ATP synthase subunit epsilon Pput_5295 5945530 - 5944154 - | F0F1 ATP synthase subunit beta Pput_5296 5946418 - 5945558 - | F0F1 ATP synthase subunit gamma TERM 4691 5946460 - 5946441 - R 88 -16.4 -3.17212 | CTATCAGGTTAGCAA GCGGGGGC CTGA GCCCCCGC TGCGGCTTACCAGGT Pput_5297 5948011 - 5946467 - | F0F1 ATP synthase subunit alpha TERM 4692 5947321 - 5947365 + g 76 -8.6 -4.183 | opp_overlap 5947304 5947329 GCAGTGCGGCGGATT CCGAAGCACTGGC-AACAACCA CGA TGGT-GTTGGCCAGGGCGCCGG TTTCTTCCAGCTTGC Pput_5298 5948569 - 5948033 - | F0F1 ATP synthase subunit delta Pput_5299 5949052 - 5948582 - | F0F1 ATP synthase subunit B Pput_5300 5949366 - 5949109 - | F0F1 ATP synthase subunit C Pput_5301 5950380 - 5949511 - | F0F1 ATP synthase subunit A Pput_5302 5950804 - 5950397 - | F0F1 ATP synthase subunit I TERM 4693 5950624 - 5950614 - G 73 -6.8 -4.27316 | CCGCTGAAGCGAAAA GCCT TCC AGGC GAAATACACATTGGG TERM 4694 5950769 - 5950759 - G 74 -4.6 -4.63527 | GCAGTACCGGAAAAA CCGC CCA GCGA TGGAAAGGCAGGCGG Pput_5303 5951826 - 5950954 - | parB-like partition protein Pput_5304 5952627 - 5951836 - | cobyrinic acid a,c-diamide synthase gidB 5953296 - 5952646 - | glucose-inhibited division protein B TERM 4695 5953313 - 5953328 + r 100 -11.8 -5.05782 | opp_overlap 5953297 CGCTTTGCTCCAATT CGCGGC CAGC GCCGCG TTTTTTCAAGTGAAT Pput_5306 5955185 - 5953293 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4696 5955186 - 5955202 + r 76 -6.5 -4.59773 | opp_overlap 5955185, overlap 5955189 GGAAGGGAAATCCAC CACGCAC CTC GTGCCTG TTTTTGCGAATAGAG Pput_5307 5955742 - 5955512 - | hypothetical protein TERM 4697 5955795 - 5955776 - R 100 -15 -5.81412 | TTCAGGCAAAAAAAA GCCGCTCC CTAA GGAGCGGC GCTTGGCCTTGCCTG trmE 5957189 - 5955819 - | tRNA modification GTPase TrmE TERM 4698 5957230 - 5957246 + r 100 -10.8 -5.4505 | opp_overlap 5957230 GACAGATAGCAAAAA CGCCCC ACTAG GGGGCG TTTTTTATTCACAGG TERM 4699 5957246 - 5957230 - R 100 -10.8 -4.86133 | opp_overlap 5957230 GACAGATAGCAAAAA CGCCCC ACTAG GGGGCG TTTTTTATTCACAGG Pput_5309 5958960 - 5957278 - | putative inner membrane protein translocase component YidC Pput_5310 5959208 - 5958963 - | hypothetical protein rnpA 5959605 - 5959201 - | ribonuclease P