TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.547995 %AT, 1578288 nt, 7251 terms. Intergenic: 0.593762 %AT, H2T: 188338 nt, 780 terms; T2T: 63562 nt, 444 terms; H2H: 64662 nt, 652 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|14518450|ref|NC_000868.1| Pyrococcus abyssi GE5, complete genome (length 1765118) rpl11p 619 - 125 - | 50S ribosomal protein L11P TERM 1 402 - 418 + g 82 -10.9 -3.59202 | TTTATCAACTGGCTA GTTGGAG GGA CTCCAAC TTCTATCTCGAACTG nusG 1089 - 631 - | transcription antitermination protein NusG secE 1279 - 1094 - | preprotein translocase subunit SecE ftsZ-1 2450 - 1332 - | cell division protein FtsZ PAB2350 2932 - 2519 - | hypothetical protein PAB2349 4109 - 3291 - | hypothetical protein PAB0004 4189 - 4890 + | hypothetical protein PAB0005 5795 - 6139 + | hypothetical protein PAB0006 6417 - 7034 + | hypothetical protein nadC 7851 - 7012 - | nicotinate-nucleotide pyrophosphorylase TERM 2 7420 - 7406 - G 72 -6.4 -4.32857 | TCGCTCAAAGAGAAA CGATGA GGC TCACCG CCACCGATCATTATG PAB2346 8655 - 7855 - | hypothetical protein PAB2345 9583 - 8657 - | quinolinate synthetase TERM 3 9092 - 9113 + g 72 -8.1 -3.78934 | gap 1 CTTCTTACCTGTCAT CTTAG-CCAC GTA GTGGGCTAAG TTCTTGTCGGGGCCA PAB2344 10786 - 9596 - | hypothetical protein PAB2343 12212 - 10818 - | L-aspartate oxidase TERM 4 11737 - 11760 + g 85 -3.8 -5.46657 | overlap 11738 AGCAACTCGCCGTTT AGGAAAACTC CAGC GAGCTTTCCA TTTTTTATTCCAATC PAB2342 13618 - 12209 - | phosphoenolpyruvate carboxylase PAB0011 13874 - 14620 + | hypothetical protein thsA 16317 - 14665 - | thermosome, subunit alpha PAB0014 16469 - 17248 + | hypothetical protein PAB2340 17653 - 17267 - | hypothetical protein PAB2339 18062 - 17640 - | hypothetical protein PAB2338 18833 - 18111 - | pyruvate formate-lyase activating enzyme related protein TERM 5 18517 - 18493 - G 70 -10.8 -2.50935 | gap 1, overlap 18492 ATGTGATTTACCAAG CCCTCAGAGAG CAAT CTCTC-GAGGG GACGGACAATTGTTA PAB2337 20816 - 18840 - | anaerobic ribonucleoside triphosphate reductase PAB2336 21989 - 20895 - | maltose/maltodextrin transport atp-binding PAB2335 22828 - 21995 - | sugar ABC transporter, permease protein TERM 6 22129 - 22101 - G 72 -9.4 -3.65314 | GCGAACTTGTAATAA GCTGGAGCGGCC CCACC GGCTGCCCCTGC GACTATCGAGAGTAT PAB2334 23679 - 22825 - | sugar ABC transporter, permease protein PAB2333 24999 - 23719 - | putative trehalose/maltose binding protein or spermidine/putrescine-binding periplasmic PAB0017 25162 - 26181 + | hypothetical protein ef1B 26453 - 26178 - | elongation factor 1-beta PAB0018a 26645 - 26454 - | Zn-ribbon RNA-binding protein involved in translation TERM 7 26654 - 26668 + H 86 -7.1 -5.12068 | CCGCCAACTCCCACA CCTCC AGAAG GGAGG TTTTTCTTAACTGTC ubiA 26740 - 27573 + | prenyltransferase UbiA-like protein PAB0019 27574 - 27954 + | hypothetical protein putP-3 28198 - 29676 + | proline symporter (proline permease) aor-3 31598 - 29724 - | aldehyde ferredoxin oxidoreductase TERM 8 30437 - 30417 - G 71 -9.7 -3.18264 | opp_overlap 30417 CCTCTCAGCTATTAA GTTGAGGAG CCT CTCCTCAGC TTCCTCATCACCGAA TERM 9 30417 - 30437 + g 79 -11.9 -3.21099 | opp_overlap 30417 CCTCTCAGCTATTAA GTTGAGGAG CCT CTCCTCAGC TTCCTCATCACCGAA PAB2329 32428 - 31589 - | morphine 6-dehydrogenase - like TERM 10 32848 - 32864 + r 74 -5.1 -4.74132 | overlap 32852 32858 32860 CCTCCGTGTTCTTCT TGGTCTC TTC GAGAGCA TTTTTAATGCGCTCT PAB2328 33322 - 33017 - | hypothetical protein PAB2327 34017 - 33424 - | hypothetical protein TERM 11 33607 - 33589 - G 71 -9.6 -3.14344 | TATCTCCTCTATTAA TGCACCGA CCT TCAGTGCA TCCACTACACTTTGA PAB0023 34176 - 34790 + | hypothetical protein PAB2326 35792 - 34782 - | hypothetical protein PAB2325 36597 - 36130 - | hypothetical protein TERM 12 36221 - 36238 + gr 72 -8.5 -3.54447 | overlap 36220 AGGGTCTTGTTTAAG CCTCTTA AGCT TAAGAGG TCTTTATCCCATGTG PAB2324 36905 - 36567 - | hypothetical protein PAB2323 37560 - 37021 - | hypothetical protein PAB2322 38024 - 37587 - | hypothetical protein PAB2321 39096 - 38347 - | hypothetical protein cobS 39903 - 39205 - | cobalamin synthase PAB3017 40157 - 39900 - | hypothetical protein PAB2319 40581 - 40150 - | hypothetical protein TERM 13 41075 - 41093 + G 72 -3 -4.95484 | opp_overlap 41077, overlap 41077 CGAGAACCTTAACGA CAGCGTTG TAG CACCGCTC TTTTATTTCATGCTG cobD 40644 - 41516 + | cobalamin biosynthesis protein hisC 41501 - 42490 + | putative aminotransferase PAB2318 43690 - 42458 - | cofactor-independent phosphoglycerate mutase PAB2317 44652 - 43723 - | modification methylase rpoL 44915 - 44628 - | DNA-directed RNA polymerase subunit L PAB2315 45534 - 44875 - | hypothetical protein PAB2314 46130 - 45531 - | exosome complex RNA-binding protein Csl4 TERM 14 46043 - 46028 - GR 72 -9 -3.40403 | opp_overlap 46025 46028 46040 CGTCTTCTACTATAA CTCCCT CTCC AGGGAG ATATTCCTCTATAAC TERM 15 46090 - 46102 + gr 74 -3.4 -5.06016 | opp_overlap 46090 GGAAGGACAAAATCA CCAT TTTTT ATGG TTTTCTTTCTCTCCT PAB2313 48664 - 46097 - | ATP-dependent RNA helicase, putative PAB2312 49140 - 48673 - | transcriptional regulatory protein or leucine-responsive-regulatory protein PAB2311 49485 - 49144 - | hypothetical protein PAB2310 50053 - 49577 - | hypothetical protein TERM 16 50920 - 50903 - gR 72 -6.3 -4.20769 | gap 1 ATACGCTAATATAAA CCT-CGAC ATG GTCGGAGG AAGTGAAGACAGGGC PAB0027 50007 - 51692 + | hypothetical protein PAB2307 52767 - 51679 - | dolichol-phosphate mannosyltransferase TERM 17 52816 - 52801 - R 71 -4 -4.87318 | overlap 52794 TTTAAAAGGGAAAAA GTTAAG TTTT CCTAAC GACGAACAGTGCGTG PAB2306 53485 - 52802 - | fibrillarin PAB2305 54705 - 53491 - | hypothetical protein TERM 18 54402 - 54421 + g 79 -11.4 -3.4489 | CTTCGTACCAATTCT CTCCGAGG AACT CCTCGGGG TTGCTTCTAAGCCTT PAB2304 55836 - 54784 - | hypothetical protein TERM 19 55870 - 55836 - G 87 -14.4 -2.86011 | opp_overlap 55836, overlap 55833 55831 TAAGGTCAAACAGCA CTTACGCCACCATAAG TGA CTTACGGGGGCATAAG TTATAAAGGTTGGGA TERM 20 55836 - 55870 + g 73 -10 -3.33261 | opp_overlap 55836 55833 55831 TAAGGTCAAACAGCA CTTACGCCACCATAAG TGA CTTACGGGGGCATAAG TTATAAAGGTTGGGA PAB2303 56890 - 55898 - | D-cysteine desulfhydrase TERM 21 57083 - 57049 - R 89 -12.1 -3.53012 | gap 1, overlap 57050 GGTTTGGGGCCTAAA GGGGGTTAGCACGGCC CTTC AGCCGTGCCT-CCCCC ACCGGGCACCCCGCG TERM 22 57083 - 57050 - R 83 -12.3 -2.71712 | overlap 57049 GTTTGGGGCCTAAAG GGGGTTAGCACGGCC CTTC AGCCGTGCCTCCCCC ACCGGGCACCCCGCG PAB2302 58131 - 57439 - | hypothetical protein TERM 23 57584 - 57594 + g 80 -6.8 -4.63952 | overlap 57574 GTAGCTCCCAGGATG GGGA ATT TCCC TTTCTTCTTTATCCT PAB2301 58666 - 58109 - | hit family protein rps15p 59426 - 59902 + | 30S ribosomal protein S15P recJ-like 59921 - 61366 + | putative ss-DNA-specific exonuclease recj related rps3AE 61592 - 62194 + | 30S ribosomal protein S3Ae PAB2299 62637 - 62191 - | transcriptional regulator PAB3022 62955 - 62719 - | hypothetical protein PAB2298 63373 - 62969 - | hypothetical protein PAB0036 63491 - 64252 + | hypothetical protein PAB0037 64275 - 65024 + | hypothetical protein PAB2294 66661 - 65639 - | asparaginase related protein PAB2293 67412 - 66717 - | hypothetical protein TERM 24 67304 - 67316 + g 82 -7.7 -4.56597 | CTAAAAATTCTTTAG CCGTA TTA TACGG TTTTTCAACGAGCAC PAB0038 67480 - 67938 + | hypothetical protein PAB2292 69318 - 68005 - | glycogen synthase PAB0040 69342 - 70229 + | hypothetical protein PAB2291 70853 - 70230 - | hypothetical protein PAB0041 70852 - 71451 + | hypothetical protein PAB0042 71513 - 72088 + | hypothetical protein PAB0043 72006 - 72494 + | hypothetical protein PAB2289 73018 - 72491 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 25 72747 - 72760 + g 72 -8.1 -3.65832 | overlap 72745 TTAACCACTTCCTTA GCCCT CTCA AGGGC TCTTTTAGCAGCTTT TERM 26 73674 - 73690 + G 78 -6.6 -4.65895 | ACGAAGAAGCTGTGT CTCCAA CGAGA TTGGAG TTTTTAACTCAGAGG PAB0044 73127 - 73969 + | hypothetical protein PAB0045 73993 - 75078 + | d-aminopeptidase PAB0046 75075 - 76142 + | hypothetical protein PAB2288 76975 - 76241 - | molybdopterin-guanine dinucleotide biosynthesis protein b related PAB2287 78891 - 77236 - | hypothetical protein PAB0049 79050 - 79895 + | fructose-bisphosphate aldolase speB 79959 - 80810 + | agmatinase TERM 27 81079 - 81069 - g 80 -6.8 -4.59773 | GGCTATGCTCAAAAA TCCC TAT GGGA AAGAGCTTCGCTGTT PAB0051 80807 - 81292 + | hypothetical protein PAB2286 82001 - 81282 - | hypothetical protein PAB0053 82066 - 82743 + | hypothetical protein PAB0054 82740 - 83756 + | hypothetical protein PAB0055 83680 - 84663 + | hypothetical protein PAB0056 84653 - 86023 + | hypothetical protein TERM 28 86194 - 86182 - g 79 -7.7 -4.42619 | opp_overlap 86182 GAAGAGCTGAGAAAA GAGGA TGT TCCTC TTGTTGGTGGTAAAG ppsA 86140 - 88599 + | phosphoenolpyruvate synthase TERM 29 88596 - 88579 - f 75 -9.9 -3.40163 | opp_overlap 88573 88582, overlap 88582 GAGGAGGAAGAGGAA GAAGAGG AGTT CCTCTTC TGATCCCCTTTTCTT PAB0058 88644 - 89390 + | hypothetical protein TERM 30 89727 - 89717 - g 77 -6.8 -4.51196 | overlap 89709 GCTAAATTCATAAAA CCCT ATG AGGG AATTAAAATACTCGG PAB0059 89387 - 91132 + | hypothetical protein PAB0060 91207 - 91668 + | purine phosphoribosyltransferase related protein PAB0061 91755 - 92831 + | hypothetical protein PAB0062 92866 - 93420 + | hypothetical protein cca 93421 - 94767 + | tRNA CCA-pyrophosphorylase PAB2280 95584 - 94754 - | hypothetical protein PAB0064 95620 - 96480 + | hypothetical protein icc 97992 - 96475 - | lacZ expression regulatory protein PAB2277 98399 - 97989 - | inosine-5'-monophosphate dehydrogenase related TERM 31 98301 - 98250 - G 72 -8.8 -3.61398 | gap 1 GCTCTTCGTGAAGAA GCCT-ACGACGTTTCCCTCATCGTC CAC GACGACAAGGGAACCAACGTCAAAC TCCATCATCAGTTTA PAB0066 98495 - 99136 + | fragment of alanyl-tRNA synthetase TERM 32 99364 - 99376 + G 71 -7.7 -3.96618 | GAAAAAGTTTGACTT CCCAT TTT ATGGG TTCTTTAAACTTGAG TERM 33 101645 - 101617 - g 74 -5.4 -4.60924 | gap 1, opp_overlap 101623 TAAACTCTGGAAAAA GGAGCACATAGAA GAGT TTCTAAGT-CTCC TTGACCATCTAAACG TERM 34 102429 - 102394 - g 70 -10.4 -2.52464 | opp_overlap 102396, overlap 102409 TGTTCTGCCAATGCA CAGGCTCAGGGAAACC TTCA GGCTCCCCCAAGCCTT AGCTGAGTTACACTC PAB0067 99140 - 103066 + | DNA helicase related protein TERM 35 106558 - 106547 - g 76 -4.4 -4.97957 | TATATAAGAATAAAA CTTG CCTA CAAG AATATAATCCTCCCA rfcS 103094 - 107407 + | replication factor C small subunit rfcL 107419 - 108858 + | replication factor C large subunit moaA 109779 - 108859 - | molybdenum cofactor biosynthesis protein A PAB2272 110850 - 109849 - | hypothetical protein PAB0070 110900 - 111604 + | hypothetical protein TERM 36 112280 - 112265 - gT 74 -9 -3.55191 | opp_overlap 112264, overlap 112263 112254 GGAAGCCGACAAATA CTCAGC ACCT GCTGAG ATAATTGAGGGCAGA PAB0071 111534 - 112979 + | hypothetical protein PAB2271 113362 - 112976 - | hypothetical protein PAB3032 113583 - 113359 - | hypothetical protein radB 114425 - 113706 - | DNA repair and recombination protein RadB TERM 37 114411 - 114436 + g 75 -11.3 -2.96695 | gap 1, overlap 114427 GCCCTTAGCCTCATA CTTCGAAGCCCT CAT AGGGCTTC-AAG TCCTTTACTAGAACC PAB2269 115038 - 114406 - | hypothetical protein PAB2404 119543 - 115176 - | DNA polymerase II large subunit TERM 38 119085 - 119069 - G 75 -6.5 -4.47217 | AATCACCAACCAAAA CGCTAAG GGC CTGAGCG GTTCCACCTGAGCTC PAB2266 121402 - 119543 - | DNA polymerase II small subunit TERM 39 120663 - 120681 + g 78 -11.8 -3.09968 | ACGTTGCTTATCTCG GGATTCTC ACG GAGAATCC TCTTAAGCTTAGATA cdc6 122700 - 121402 - | cell division control protein 6 TERM 40 123038 - 123023 - R 74 -6.2 -4.43477 | CCGATGGAAGGAAAA TGAACA TATA TGTTCA TTCAGATAAGAGCAT TERM 41 123169 - 123181 + r 83 -4.9 -5.24129 | GGGTTGCGACACCGA GAATA TTC TATTC TTTTTTCTGACAAGA mtaP 124273 - 123500 - | 5'-methylthioadenosine phosphorylase II PAB0075 124370 - 125095 + | hypothetical protein PAB0076 125105 - 125485 + | hypothetical protein PAB2263 126230 - 125475 - | hypothetical protein PAB0078 126284 - 127075 + | hypothetical protein PAB2261 128499 - 127753 - | hypothetical protein PAB0079 127098 - 127805 + | hypothetical protein cbiO 129278 - 128496 - | cobalt ABC transporter, ATP-binding protein PAB0081 129436 - 130338 + | hypothetical protein TERM 42 131085 - 131102 + G 74 -7 -4.24342 | AAGTATACGCCAGTT CACGAC AAGACC GTCGTG TTTATTAGTGACCAC PAB0082 130350 - 132062 + | hypothetical protein PAB0083 132198 - 133397 + | hypothetical protein napA-1 133451 - 134578 + | Na+/H+ antiporter PAB0085 134830 - 135984 + | hypothetical protein PAB0086 136005 - 137405 + | pyridoxal phosphate-dependent aminotransferase PAB2257 137882 - 137406 - | transcriptional regulatory protein pbp 138044 - 139387 + | beta-lactamase-like protein PAB0088 139689 - 140129 + | hypothetical protein PAB0089 140169 - 140570 + | hypothetical protein ndaD 140777 - 142357 + | d-aminoacylase (aspartate, glutamate ETC) TERM 43 142584 - 142564 - g 73 -11.2 -2.70498 | overlap 142542 142563 GATAGGCTACACAAG GGATCCAG ATACA CTGGATCC ACAGAAGTCCACGTG dppA-1 142385 - 144055 + | dipeptide ABC transporter, dipeptide-binding protein dppB-1 144071 - 145003 + | dipeptide ABC transporter, dipeptide-binding protein dppC-1 145005 - 145868 + | dipeptide ABC transporter, dipeptide-binding protein dppD-1 145870 - 146841 + | dipeptide ABC transporter, dipeptide-binding protein TERM 44 147130 - 147174 + G 88 -12.4 -3.61103 | gap 1, opp_overlap 147125 147124 GAAGGAGAATGGGCA TCGTC-TTCCAGGATCCAAAG TCAT CTTTGAATCCTAGAATGACGA TTTACGATACCCTTA dppF-1 146838 - 147875 + | dipeptide ABC transporter, dipeptide-binding protein TERM 45 148970 - 149000 + F 100 -16.2 -3.8802 | opp_overlap 148966 148965, overlap 148955 148959 TTGAAAGAGAGGGTT GAGGGCTTGTGGCT CTC AGCTCCAAGCCCTC TTTCAATTCTATTTT TERM 46 149236 - 149249 + F 77 -8.1 -4.20712 | opp_overlap 149236 TATTGGAACCAACAA GCTCC GTGT GGAGC TTTTCAACTATTCTC TERM 47 149249 - 149236 - f 73 -8.1 -3.8186 | opp_overlap 149236 TATTGGAACCAACAA GCTCC GTGT GGAGC TTTTCAACTATTCTC birA 150138 - 150851 + | biotin--protein ligase PAB2253 151742 - 150834 - | 2-phosphoglycerate kinase PAB2252 153021 - 151726 - | hypothetical protein TERM 48 151813 - 151827 + g 72 -5.6 -4.50761 | GTTCACGGGCTCGTT GTCGAG GAA CACGAC TTTCTTTCCGTTACT TERM 49 152296 - 152316 + g 78 -6.1 -4.55826 | opp_overlap 152295 GCTTGCTCCAGAACC CTCGAGC ACTATCA GCTCGGG TTTTAATGTTTTGGC PAB0101 153142 - 154176 + | hypothetical protein PAB2251 154878 - 154156 - | hypothetical protein PAB2250 156023 - 154875 - | hypothetical protein TERM 50 156163 - 156177 + G 73 -7.8 -4.04209 | ACGCTGTACCTTTTT GCTGCC CTC GGTAGC TTTCTAATAGTTTAC PAB0102 156130 - 156876 + | anion transport system permease protein PAB0103 156896 - 157930 + | ABC transporter, ATP-binding protein PAB2248 158408 - 157917 - | biotin synthase, putative birA-like 158457 - 159140 + | related biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase PAB2247 159651 - 159100 - | RNA 2'-phosphotransferase-like protein PAB0105 159876 - 160556 + | hypothetical protein PAB2246 162657 - 161263 - | site specific DNA-methyltransferase TERM 51 161688 - 161699 + g 71 -3.6 -4.81863 | CTATTTCCCCAACAT GTGC ATGT GCGC TTTTCTTGTCCATTT TERM 52 162280 - 162290 + g 86 -2.6 -5.80248 | opp_overlap 162280, overlap 162284 TCTCCCCAATTCAAA TTTT GAT AAAA TTTTTTTGTCTGTTA PAB0107 163153 - 163692 + | hypothetical protein PAB2245 164352 - 163672 - | glutaredoxin-like protein PAB0108 164474 - 165196 + | hypothetical protein PAB3048 165165 - 165359 + | ferredoxin TERM 53 166298 - 166282 - g 79 -9.5 -3.83318 | TCTTGAAGAAGAGAA TCTTGAG TTA CTCAAGA ACTACAGCGAAGAAT bchP 165356 - 166537 + | bacteriochlorophyll synthase 43 kDa subunit or geranylgeranyl hydrogenase nadE 167294 - 166521 - | NAD synthetase PAB2243 168241 - 167291 - | hypothetical protein TERM 54 167755 - 167771 + g 72 -5.8 -4.55287 | opp_overlap 167755 TGTAAGCTAAATAAA GCTCGG CCTGC TCGAGC TTTTCTCTACATCCA TERM 55 167771 - 167755 - G 70 -5.1 -4.50159 | opp_overlap 167755 TGTAAGCTAAATAAA GCTCG GCCTGCT CGAGC TTTTCTCTACATCCA moaE 168296 - 168742 + | molybdopterin converting factor, subunit 2 PAB0111 168834 - 169775 + | hypothetical protein PAB0112 169859 - 170614 + | hypothetical protein PAB0113 170626 - 171381 + | hypothetical protein PAB0114 171526 - 172215 + | hypothetical protein PAB0115 172193 - 173311 + | hypothetical protein PAB0116 173342 - 173920 + | hypothetical protein TERM 56 174163 - 174187 + GT 70 -7.7 -3.69684 | overlap 174160 ACAGGGAAGATGTGA GGGCGGTGGTG CAT CTCCATCCCCC TTATTCAATCACTTT fucA 173886 - 174470 + | L-fuculose phosphate aldolase PAB2241 174807 - 174460 - | RnaseP RNA TERM 57 174573 - 174558 - G 70 -10.4 -2.52464 | CGGTGCCGCAAGGCA CCTCCC GAGA GGGAGG GCAACGGCACAGAAA amyA 174843 - 176810 + | Alpha-amylase (or 4-alpha-glucanotransferase) malE 176911 - 178272 + | maltose-binding periplasmic protein precursor (maltodextrin-binding protein) (mmbp) TERM 58 178330 - 178319 - g 83 -2.2 -5.73563 | ATGAAATGAAAAAAA CTAC AATA GCAG CTTTAGTACTGATCT malC 178294 - 179202 + | maltodextrin transport system permease protein malG 179199 - 180437 + | maltose transport system permease protein malg apu 180434 - 184522 + | amylopullulanase TERM 59 185005 - 185022 + G 82 -11.3 -3.61398 | opp_overlap 185004, overlap 185018 GGCAGAGGCAGAGAG TGGCCCT TGGA AGGGCCA TTATTAGGAGACCGA msmK 184563 - 185678 + | multiple sugar-binding transport atp-binding protein msmk PAB2236 186712 - 185675 - | DNA primase small subunit PAB2235 187862 - 186660 - | DNA primase large subunit TERM 60 186767 - 186751 - GH 73 -8 -3.88232 | opp_overlap 186750, overlap 186735 CTCCTTAGATAATAA GTGAGG GGATT CCTCAC GTACTTACAGTGCTT PAB0124 187879 - 188952 + | hypothetical protein TERM 61 189133 - 189123 - g 80 -5.4 -5.02476 | overlap 189125 ACACGGTGGAAAAAA CTCA AGA TGAG CTTGCCGAAGAACTT PAB0125 189023 - 189490 + | AsnC family transcriptional regulator PAB2234 190034 - 189462 - | GTP-binding protein TERM 62 190118 - 190143 + r 71 -9.9 -2.90075 | gap 1, overlap 190122 GTATATTATCTCATG GGAAGTTATCTG TTG CAG-TAACTTCC TCTCGTTACCAAGAA PAB2233 191296 - 190097 - | proteasome-activating nucleotidase PAB2232 192445 - 191357 - | sugar transport atp-binding protein TERM 63 191726 - 191762 + g 73 -10.1 -3.36803 | opp_overlap 191726 191754 TCTGGCCTCCACGAA GTTCATTGGAGGATTCC CCA GGAAGCCACCGACGAAC TTGTACATCGGCTTG TERM 64 191762 - 191726 - G 71 -10.1 -3.14132 | opp_overlap 191726, overlap 191754 TCTGGCCTCCACGAA GTTCATTGGAGGATTCC CCA GGAAGCCACCGACGAAC TTGTACATCGGCTTG PAB2231 193326 - 192457 - | transmembrane sugar transport protein TERM 65 192686 - 192676 - G 78 -5.4 -4.78661 | AGCTAAAAACGAAAA CAGT GCA ACTG CCAAAATTCCTGGCT PAB2230 194267 - 193326 - | sugar transport system permease protein PAB2439 195909 - 194272 - | sugar ABC transporter binding protein related TERM 66 194378 - 194405 + g 70 -9.9 -3.0517 | overlap 194377 ATGAATTTCACGGCT TCCTCAGGAGT CATCTC ACCCCTGAGGA CTTTATCTACTGCCT PAB2227 197247 - 196015 - | aminotransferase PAB2402 198510 - 197536 - | translation initiation factor IF-2B subunit delta PAB2224 198893 - 198498 - | hypothetical protein PAB3055 199102 - 198890 - | hypothetical protein rad25-like 199218 - 200558 + | DNA repair protein RAD25 speE 201386 - 200547 - | spermidine synthase PAB0130 201464 - 202654 + | hypothetical protein PAB0131 202651 - 203163 + | hypothetical protein PAB2220 203758 - 203150 - | hypothetical protein PAB0133 203820 - 204710 + | hypothetical protein TERM 67 204949 - 204935 - f 82 -8.5 -4.25104 | CGCTCCCGAGGAAAA CCCCC GAATT GGGGG GACCCCTCGGGAGTA TERM 68 205137 - 205112 - f 100 -16.1 -3.06915 | opp_overlap 205112 AGCCATGCGAGTCAA GGGGGCGTCCC TTCT GGGACGCCACC GGCGGACGGCTCAGT TERM 69 205266 - 205251 - f 72 -10.4 -2.74144 | overlap 205250 TCCCCAGGCCGAAAG GGAGCC GTAA GGCTCC GCCCGAGGATGGGCC TERM 70 205453 - 205471 + F 100 -16 -4.10657 | opp_overlap 205431 205432 GGGGGGACCCCCAGT GCCGTGCC TCT GGCACGGC TTTTCCGGAGTGTAA TERM 71 205634 - 205614 - f 74 -8.9 -3.53343 | overlap 205615 AAGTCCCTGGCGAAA TCCCACGGC TCA ACCGTGGGG CTCGCTGGGGATACT TERM 72 205633 - 205615 - f 83 -12.4 -2.71791 | overlap 205614 AGTCCCTGGCGAAAT CCCACGGC TCA ACCGTGGG GCTCGCTGGGGATAC TERM 73 206536 - 206512 - f 77 -10.8 -2.79135 | gap 1, overlap 206511 206515 AGAAGTCGTAACAAG GTAGCCGTAGG GGAA CCTACGGCT-C GATCACCTCCTATCG TERM 74 206534 - 206515 - f 91 -13.6 -2.65808 | overlap 206512 206511 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTACGGC TCGATCACCTCCTAT TERM 75 206721 - 206692 - f 91 -12.9 -3.14693 | gap 1, overlap 206690 206688 TCCACCACGAAGAGA TGCACGTCCCGAGC CCA GCTCGGGACG-GAA GGGCCCAAGGCCCCC TERM 76 206734 - 206722 - f 75 -10.5 -3.05596 | overlap 206690 206688 CAGCTCGGGACGGAA GGGCC CAA GGCCC CCTAATAGGGGGCGA TERM 77 207426 - 207413 - f 83 -9.5 -3.90112 | overlap 207397 CCTCCCCGAAGGAAA CCGCG GCGA CGCGG GAGTACGAGGGGAGG TERM 78 209374 - 209358 - f 71 -5.1 -4.57755 | AGGGATGACAGAAAA GCTACCC TGG GGATAAC AGAGTCGTCTCGGGC TERM 79 209435 - 209473 + F 78 -11.1 -3.04322 | gap 2 CCTCGCTGTCGGCTC TTCCCATCCT-GG-CCCTG CAG CAGGGGCCAAGGGTGGGGG TGTTCACCCATTAAA TERM 80 209691 - 209679 - f 75 -10.5 -3.09933 | opp_overlap 209687, overlap 209662 CCTGAAGGCATCTAA GGCCG AAG CGGCC CCCGAAAATAGGCGG PAB0137 209955 - 211406 + | hypothetical protein PAB0138 211403 - 211975 + | hypothetical protein lysK 212028 - 213608 + | lysyl-tRNA synthetase PAB0140 213612 - 214508 + | hypothetical protein PAB2213 215162 - 214479 - | sterol biosynthesis methyltransferase related PAB0141 215226 - 216182 + | hypothetical protein PAB0142 216175 - 217326 + | hypothetical protein iorB-2 217338 - 217922 + | indolepyruvate oxidoreductase subunit B PAB2211 219073 - 217919 - | multidrug resistance protein TERM 81 218938 - 218912 - G 93 -10.2 -4.65263 | ACCGGCTAAAAGAAA GCTCAAACCCCC TAT GAAGGTTTGAAC TGAAAAGAGGACTCC PAB0144 219163 - 220074 + | phosphate regulatory protein, putative asnA-2 220129 - 221046 + | plant-type l-asparaginase (l-asparagine amidohydrolase) PAB0146 221046 - 222209 + | multidrug resistance protein TERM 82 222811 - 222795 - g 70 -2.1 -5.04175 | opp_overlap 222795, overlap 222789 TGAAGTATACAAAAA GGGAGGC ATA GTTTCCC TATTCGCGTTCACCC bioB-like 222199 - 223107 + | biotin synthase PAB2401 223683 - 223108 - | potassium channel, putative PAB2207 224287 - 223670 - | potassium channel, putative PAB0149 224378 - 225043 + | hypothetical protein TERM 83 225141 - 225121 - gT 80 -6.2 -4.66537 | TTGCCGAACATAAAA TAAGCCTC AGGAG GAAGCTTA AGGAGTTAAAATCAA PAB0150 224997 - 225806 + | hypothetical protein PAB2205 226459 - 225803 - | hypothetical protein purC 227209 - 226505 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 84 228424 - 228410 - g 71 -10 -3.29142 | overlap 228408 228406 CCCACCAATAAGATA CCCATG CTA CATGGG GATAGACATACCTAC purF 227268 - 228611 + | amidophosphoribosyltransferase TERM 85 229015 - 228999 - g 73 -2.2 -5.18995 | AAGATAAGAGAAAAA CGCTCT TCGTT ATAGCG GTTGAGTTCAGGGAT PAB0152 228593 - 229039 + | hypothetical protein asnC 230327 - 229023 - | asparaginyl-tRNA synthetase TERM 86 230377 - 230393 + r 70 -5.9 -4.44548 | TTTATAACTATAATG GTTCATT GTC GATGAAC TTTTGATTAAATATC PAB2202 233583 - 230653 - | oligosaccharyl transferase TERM 87 232843 - 232857 + g 75 -2.8 -5.26119 | GTAGAACTCCTTCAC GAACTT TTT AAGCTC TTTTATTTTTCCAAA PAB2201 235392 - 233596 - | D-fructose-6-phosphate amidotransferase TERM 88 234036 - 234052 + g 74 -7.3 -4.30911 | CTCTCCTATCATTTA GGGACTT GGC AAGTTCC TTTATCTTCTCGTTC PAB2200 236522 - 235470 - | hypothetical protein psmB 237118 - 236525 - | proteasome, subunit beta TERM 89 236616 - 236629 + g 72 -5.2 -4.63932 | ACATCTCTAGCTCCA GCCG CTTTTA CGGC TTTTATTGCAAGCTC tldD 237191 - 238549 + | tldd protein tldE 238546 - 239829 + | pmba protein (tlde protein) PAB0156 239885 - 240484 + | hypothetical protein PAB2198 241040 - 240471 - | hypothetical protein TERM 90 241060 - 241092 + H 71 -6.6 -4.07687 | gap 1 CCACCGCACTCTATT TTTGGAAC-TATATT CTTA AATGTATGTTCCAAA TTTTGAACGAAAAAT PAB0157 241146 - 242351 + | nifs protein PAB2197 243027 - 242326 - | hypothetical protein PAB2196 243556 - 243020 - | hypothetical protein PAB2195 244689 - 243553 - | serine protease htra related protein PAB0159 244742 - 245245 + | hypothetical protein PAB0160 245270 - 245983 + | hypothetical protein PAB0161 246081 - 246695 + | hypothetical protein PAB0162 246742 - 247269 + | hypothetical protein noxC 247262 - 247963 + | NADH oxidase (noxc) radA 248272 - 249342 + | DNA repair and recombination protein RadA PAB0165 249350 - 250096 + | methyltransferase related protein TERM 91 250437 - 250424 - g 70 -2.3 -4.98531 | opp_overlap 250425, overlap 250425 TTTCTAAATGAAAAA GCCCT CAGA AGGGT TATCTTTATGGACTT PAB0166 250115 - 250924 + | hypothetical protein PAB2191 251528 - 250989 - | inosine-5'-monophosphate dehydrogenase related TERM 92 252478 - 252462 - g 79 -10.9 -3.38812 | overlap 252460 TTTTTTTCAACAACA CGGGAAT AGA ATTCCCG GAGACTGTGGAGTAC TERM 93 252862 - 252844 - g 70 -8.8 -3.38564 | overlap 252845 GAAACTTAGGTACAA TCCCCTCT ACG AGAGGGGT ATAGACAGGATAGGC TERM 94 252861 - 252845 - g 78 -12.3 -2.62656 | overlap 252844 AAACTTAGGTACAAT CCCCTCT ACG AGAGGGG TATAGACAGGATAGG PAB0168 251603 - 253501 + | hypothetical protein asnS-like 253645 - 254529 + | asparagine synthetase A TERM 95 255156 - 255145 - g 73 -4.4 -4.86731 | overlap 255155 GGTGCCGAAAGAAAA GCTT GAAG AAGC CCTTAAGATGGCAGA gptA 254573 - 255220 + | purine phosphoribosyltransferase PAB2438 255905 - 255504 - | lactoylglutathione lyase methylglyoxalase) (aldoketomutase) (glyoxalase i) PAB2398 256863 - 255889 - | lysine arginine ornithine transport system kinase mcmA2 257359 - 256919 - | methylmalonyl-CoA mutase, subunit alpha, C-terminus PAB0172 257468 - 258100 + | hypothetical protein PAB2186 259797 - 258121 - | hypothetical protein PAB0174 259918 - 261384 + | hypothetical protein folp 261386 - 262900 + | dihydropteroate synthase PAB0176 263102 - 263602 + | hypothetical protein PAB2437 264441 - 263599 - | hypothetical protein PAB2181 265313 - 264453 - | hypothetical protein TERM 96 264741 - 264758 + g 72 -5.6 -4.51763 | overlap 264738 AACCTCGCTTTCCTT GAGCTT CTTCTC AAGCTC TTTCTTCTCTTGTTC PAB2180 266060 - 265317 - | hypothetical protein TERM 97 266575 - 266563 - g 74 -3.3 -5.02715 | overlap 266564 ATACTAAAGGAAAAA GTCCC AAA GGGAG AGATACAAGGAGCGA PAB0178 266188 - 266745 + | hypothetical protein PAB0179 267098 - 267901 + | hypothetical protein PAB2178 269027 - 267930 - | x-pro dipeptidase PAB2177 269869 - 269078 - | short chain dehydrogenase TERM 98 269336 - 269361 + g 79 -11.3 -3.30124 | gap 1 GTTAACGGTTATTCC CTTTGGCCCAAG TTC CTTGG-CCAAAG TTCTCACCAATCCGG PAB2176 270783 - 269923 - | 2-acetyl-1-alkylglycerophosph ocholine esterase TERM 99 270700 - 270710 + g 72 -5.4 -4.4009 | overlap 270698 GCCTACTCTCCTAGG TGGT GTT ACCA TTTTGTAGCCTACGA PAB2175 272072 - 270780 - | transporter PAB2174 273440 - 272082 - | hypothetical protein PAB0180 273528 - 274280 + | glycerophosphoryl diester phosphodiesterase TERM 100 274703 - 274689 - g 74 -5.7 -4.58213 | TAATCAAGGAGAAAA CTGGA TTAAT TCCAG ACGCTTACTTCTCTG glpK 274307 - 275791 + | glycerol kinase PAB0182 275813 - 276454 + | hypothetical protein TERM 101 276560 - 276574 + F 86 -7.2 -5.0925 | opp_overlap 276559 AAAGATTTAAAACCT GGAAAT CCT ATTTCC TTTTTAGTTTTGAGG TERM 102 277739 - 277725 - g 75 -2.8 -5.20333 | opp_overlap 277730 GATTGAGAAGAAAAA CTGGAA CCC TTACAG AAGGGACTTTCCCAG glpA 276598 - 278091 + | glycerol-3-phosphate dehydrogenase PAB0184 278091 - 279314 + | monooxygenase PAB0185 279311 - 279658 + | hypothetical protein rpl37ae 279719 - 279970 + | 50S ribosomal protein L37Ae PAB3072 279977 - 280126 + | DNA-directed RNA polymerase subunit P PAB2357 280169 - 280843 + | ribosomal biogenesis protein PAB3073 280821 - 281054 + | hypothetical protein TERM 103 281034 - 281054 + F 73 -7.7 -3.80625 | overlap 281023 281039 TGGATCAAGGTGGCC CTAGATGTT CTG AACATTTAG TTTGCCTTCTCGAGA fus 281135 - 283333 + | elongation factor EF-2 PAB0188 283384 - 284187 + | hypothetical protein imp1 284190 - 284954 + | bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase TERM 104 285906 - 285888 - g 78 -6.7 -4.68994 | gap 1, overlap 285877 ATGAGGAGGCAAAAA CTGGCTCC ACCA GG-GCCAG CAAGGAGTTATTCCT PAB0190 284951 - 287209 + | Hef nuclease PAB2167 287865 - 287206 - | hypothetical protein PAB0191 288270 - 289022 + | hypothetical protein PAB2166 290173 - 289478 - | hypothetical protein PAB2165 291000 - 290182 - | hypothetical protein TERM 105 290560 - 290572 + g 85 -5.5 -5.40625 | overlap 290556 GTTATAGATTTCTAA GGCTA TCT TGGCC TTTTTTATGTGCTCT PAB2164 291347 - 290994 - | hypothetical protein PAB2163 292476 - 291349 - | replication factor A PAB2162 293064 - 292486 - | hypothetical protein PAB2161 294708 - 293107 - | hypothetical protein TERM 106 293289 - 293326 + g 73 -10.7 -3.03214 | gap 1, opp_overlap 293274 293288, overlap 293282 293301 CTATTCCAACGGAAG CCGCTGTTACAGCGTAGG GTA TCTGCGTTGTAAC-GTGG TCTATGTGGTCACTT PAB0194 295028 - 296017 + | hypothetical protein PAB2159 296603 - 295983 - | hypothetical protein PAB2158 297538 - 297203 - | hypothetical protein PAB2157 298689 - 297460 - | hypothetical protein TERM 107 298221 - 298210 - GR 83 -7.2 -4.81212 | TTTATCATAATAAAA GCCG TATC CGGC CAATAACTTCTCAAT PAB3079 299347 - 299030 - | hypothetical protein PAB2154 302642 - 299328 - | type I restriction-modification enzyme, R subunit TERM 108 301708 - 301698 - G 73 -4 -4.8622 | opp_overlap 301698 GTTGGCAACGAAAAA CATT ATG AATG TTTTCCCACTTCCCT PAB2152 303868 - 302711 - | hypothetical protein TERM 109 302852 - 302865 + g 73 -2.3 -5.10461 | TCTGCTGAGAGCATC CTCGG AAAT CCCAG TTTTTATTAAGTCAC TERM 110 303811 - 303832 + g 100 -15.9 -3.40639 | overlap 303796 GTCTTGGCATTGATA CCCCCCGAA GTAC TTCGGGGGG TTCCTTGATAAACTT PAB2150 305173 - 303890 - | type I restriction-modification enzyme, S subunit PAB2149 307037 - 305166 - | type i restriction modification enzyme, subunit m TERM 111 306854 - 306870 + g 71 -7.3 -4.14472 | CCATAAGTTCCTTAC GCTTTTC CTC GAAGAGC TTTTCAACGTCTTCC PAB2148 308957 - 307215 - | ABC transporter ATP-binding protein PAB2147 310686 - 308947 - | ABC transporter, ATP-binding protein TERM 112 309261 - 309271 + g 71 -6.8 -4.07568 | overlap 309252 309253 TCTGTCCCCCTGAGA GGGT TAT ACCC TTTTCGCCGACCACG TERM 113 309452 - 309464 + g 88 -7.7 -5.0916 | TAGGCAACTATCTTC CTGAG GTT CTCAG TTTTTATCTTGGCAA TERM 114 309949 - 309937 - G 71 -3.4 -4.87626 | GCCCAAGACTAAAAA TGGA GCGTT TCCA TAAAGTGCAGTTATC sucC-like 310853 - 311551 + | succinyl-coa synthetase, beta subunit related protein PAB0204 311643 - 311978 + | hypothetical protein PAB0205 312060 - 312788 + | hypothetical protein PAB0206 312785 - 314116 + | hypothetical protein galE-1 315017 - 314094 - | UDP-glucose 4-epimerase gph 315073 - 315732 + | phosphoglycolate phosphatase PAB0208 316073 - 316678 + | hypothetical protein PAB3084 316710 - 316994 + | H/ACA RNA-protein complex component Gar1 PAB0209 317020 - 317511 + | hypothetical protein PAB2143 318110 - 317508 - | hypothetical protein PAB0211 318434 - 319012 + | inosine-5'-monophosphate dehydrogenase-like protein I soxA 319064 - 320509 + | sarcosine oxidase, subunit alpha TERM 115 320694 - 320684 - g 78 -5.4 -4.87665 | CGGGAGCTATAAAAA TGGA AAA TCCA AATGACATACCTATA PAB0213 320506 - 321012 + | polyferredoxin related PAB3086 321009 - 321275 + | hypothetical protein soxB 321272 - 322411 + | sarcosine oxidase, subunit beta PAB2141 322935 - 322408 - | hypothetical protein PAB2140 323521 - 322928 - | adenylate kinase secY 324989 - 323583 - | preprotein translocase subunit SecY rpl15p 325481 - 325038 - | 50S ribosomal protein L15P rpl30p 325960 - 325493 - | 50S ribosomal protein L30P rps5p 326681 - 325971 - | 30S ribosomal protein S5P rpl18p 327289 - 326678 - | 50S ribosomal protein L18P rpl19e 327759 - 327304 - | 50S ribosomal protein L19e rpl32e 328161 - 327769 - | 50S ribosomal protein L32e rpl6p 328726 - 328172 - | 50S ribosomal protein L6P rps8p 329129 - 328737 - | 30S ribosomal protein S8P rps14P 329309 - 329139 - | 30S ribosomal protein S14P rpl5p 329879 - 329313 - | 50S ribosomal protein L5P rps4E 330621 - 329890 - | 30S ribosomal protein S4e rpl24p 330986 - 330621 - | 50S ribosomal protein L24P rpl14p 331422 - 330997 - | 50S ribosomal protein L14P rps17p 331769 - 331428 - | 30S ribosomal protein S17P TERM 116 331623 - 331635 + g 77 -9.1 -3.9398 | overlap 331622 GTAGTACTGCCTCTC GACCG TGA CGGTC TTTCTGGGCTTGTCA PAB2126 332146 - 331763 - | ribonuclease P protein component 1 PAB7082 332331 - 332032 - | translation initiation factor Sui1 TERM 117 332270 - 332297 + gr 76 -9.2 -3.72695 | ACCCTAATTCTCTGC TGCTCCTTGAGG ACCT CCTTAAAGAGCA TTTCATCCAACGGGT rpmC 332547 - 332341 - | 50S ribosomal protein L29 rps3p 333166 - 332534 - | 30S ribosomal protein S3P rpl22p 333638 - 333171 - | 50S ribosomal protein L22P rps19p 334047 - 333649 - | 30S ribosomal protein S19P rpl2p 334777 - 334058 - | 50S ribosomal protein L2P rplW 335049 - 334789 - | 50S ribosomal protein L23 rpl4lp 335822 - 335055 - | 50S ribosomal protein L4P TERM 118 335791 - 335821 + g 70 -9.8 -3.00022 | overlap 335795 335796 ATCTCATCAACGGGT TGACCGTTAAGGTC GAA GACCTTAACCTTCA TCTATCTCACCTCAC TERM 119 335795 - 335817 + g 70 -9.2 -3.35197 | overlap 335791 335796 CATCAACGGGTTGAC CGTTAAGGTC GAA GACCTTAACC TTCATCTATCTCACC TERM 120 335796 - 335816 + g 78 -12.7 -2.60797 | overlap 335795 335791 ATCAACGGGTTGACC GTTAAGGTC GAA GACCTTAAC CTTCATCTATCTCAC rpl3p 336918 - 335833 - | 50S ribosomal protein L3P PAB2119 337696 - 336920 - | hypothetical protein TERM 121 337818 - 337808 - R 70 -2.6 -5.08011 | AAAATTCTTAAAAAA TTTT TGC AAAA TGGAAGATCTTGGAG PAB2118 338684 - 337836 - | hypothetical protein PAB2117 339166 - 338753 - | hypothetical protein TERM 122 339091 - 339111 + g 76 -8.3 -4.05669 | CAACTTGCTTGACCT TGTCCTTGA GTA TCGAGGGCA TCTTTTTCTGAGGTT PAB2116 340474 - 339221 - | hypothetical protein TERM 123 340025 - 340049 + g 100 -12.9 -4.42974 | TATTAAATCCCCAAT TTCCCTGGGCT CGT ATCCCAGGGAA TTTATTATATCTGGA han1 340769 - 340972 + | histone-like protein han1 subunit PAB2114 342437 - 341799 - | hypothetical protein PAB0223 341042 - 341851 + | GTP cyclohydrolase TERM 124 341836 - 341857 + gF 71 -3.7 -4.90013 | overlap 341840 GCACGATGTAATAGC GGAGGCTTG GGCT TAAGCTTTC TTTTTAATTCCATTA TERM 125 341840 - 341853 + gF 72 -3.1 -4.96773 | overlap 341836 GATGTAATAGCGGAG GCTTG GGCT TAAGC TTTCTTTTTAATTCC TERM 126 342712 - 342722 + G 75 -3.2 -5.1166 | GGAAAATACTAACCT TGTC AAT GGCA TTTTTGGTTTTAGTC PAB0225 342489 - 342965 + | hypothetical protein thii 342962 - 343558 + | hypothetical protein PAB0227 343555 - 343875 + | hypothetical protein PAB2113 344575 - 343859 - | hypothetical protein PAB2112 345990 - 344572 - | succinyl-coa synthetase alpha chain related protein pyrG 346124 - 347737 + | CTP synthetase PAB0232 347724 - 348158 + | hypothetical protein PAB2111 348512 - 348141 - | hypothetical protein PAB2110 349304 - 348648 - | hypothetical protein PAB2109 352840 - 349307 - | chromosome segregation protein smc1 TERM 127 352294 - 352306 + g 72 -2.6 -4.99435 | CCTCGGCCTGCTTAA GCTC CTGGA GGGC TTTTTCCTTCTTGGC PAB0239 352901 - 353230 + | hypothetical protein TERM 128 353650 - 353662 + G 74 -5.5 -4.56314 | overlap 353646 ATAGGGGGTATCCCT CAGCT GAC GGCTG TTTTAGTTATATTAA PAB0240 353227 - 353901 + | hypothetical protein TERM 129 354049 - 354033 - g 75 -10.9 -3.11584 | opp_overlap 354033, overlap 354031 354029 ATACTAGCTAAGATA CTTAGGG TTC CCCTAAG TGACTTGGGCTTGAA TERM 130 354033 - 354049 + G 73 -10.9 -2.55074 | opp_overlap 354033 354031 354029 ATACTAGCTAAGATA CTTAGGG TTC CCCTAAG TGACTTGGGCTTGAA TERM 131 354310 - 354289 - g 76 -5.3 -4.81852 | gap 1, opp_overlap 354287 354289 CTAGAAGGAACAAAA TCTT-AGCTA TTC TAGCTCAAGA TATTCCCTATACCCT PAB0241 353898 - 354482 + | hypothetical protein PAB2107 355800 - 354475 - | TBP-interacting protein TIP49 mvaA 357119 - 355884 - | 3-hydroxy-3-methylglutaryl-coenzyme A reductase minD-3 357888 - 357133 - | cell division inhibitor dinF-like 358051 - 359442 + | damage-inducible protein PAB2104 360382 - 359432 - | hypothetical protein PAB0245 360464 - 361243 + | glucose-1-dehydrogenase PAB0246 361240 - 361713 + | hypothetical protein moaC 362170 - 361691 - | putative molybdenum cofactor biosynthesis protein C PAB0247 362224 - 363492 + | hypothetical protein trkH 363542 - 365023 + | TRK potassium uptake system protein PAB0249 365020 - 365862 + | ABC transporter, ATP-binding protein PAB2098 367290 - 366739 - | adenylyl cyclase related protein PAB0250 365970 - 366824 + | cysteine synthase, o-acetylserine (thiol) lyase b PAB2097 367849 - 367283 - | archaemetzincin-like protein PAB2096 368886 - 367846 - | aminopeptidase PAB0252 369008 - 369637 + | hypothetical protein TERM 132 369782 - 369795 + G 72 -8.1 -3.69395 | TAGTCTTAGAGGTGG GCCCA GGAT TGGGC TTCTTAACTGATGAG TERM 133 370172 - 370192 + G 76 -7.5 -4.28994 | opp_overlap 370172 CATTCTATCCAAAAC CCAAGGTTG ACT CTGCCTTGG TTTTGATAACTCCTA ksgA 369634 - 370443 + | dimethyladenosine transferase PAB2094 371654 - 370440 - | S-adenosylmethionine synthetase PAB0254 371784 - 372635 + | hypothetical protein xerD-like 372604 - 373464 + | integrase/recombinase xerd PAB2407 373439 - 374371 + | hypothetical protein PAB2092 375713 - 374562 - | N(2),N(2)-dimethylguanosine tRNA methyltransferase TERM 134 375648 - 375626 - G 74 -3.3 -5.0538 | opp_overlap 375644 TGGGATTGTAAAAAA CGGGTGCAT CGTAT ATGCTCTCG GCCTTTGGGGTGAGA PAB7092 375988 - 375725 - | 50S ribosomal protein L35Ae TERM 135 376044 - 376030 - H 81 -7.2 -4.59773 | GGGGACTTTTAAAAA TTATCC CAG GGATAA CAGTTAAGAAATGCC gap 376086 - 377090 + | glyceraldehyde-3-phosphate dehydrogenase PAB0258 377159 - 377491 + | hypothetical protein PAB2090 378073 - 377474 - | hypothetical protein thiL 378130 - 379062 + | thiamine monophosphate kinase TERM 136 379241 - 379227 - g 72 -5 -4.68655 | TAAGTTTAAAAGAAA GGCATT CTA AATACC CGGAACTAGTTTTCA ogt 379049 - 379567 + | methylated-DNA--protein-cysteine methyltransferase PAB2408 379555 - 380571 + | hypothetical protein PAB0262 380868 - 382328 + | hypothetical protein PAB0263 382614 - 383237 + | hypothetical protein PAB7094 383521 - 383240 - | chromatin protein PAB2086 385996 - 383609 - | cell division protein CDC48 aor-1 387982 - 386096 - | tungsten-containing aldehyde ferredoxin oxidoreductase PAB2084 388484 - 387984 - | electron transport protein PAB2083 388779 - 388468 - | hypothetical protein TERM 137 388639 - 388653 + g 70 -10 -3.08327 | GTGGGCTTTTGATAT TCCCTC CGC GAGGGA TGTTAAGGATTTGCT TERM 138 388746 - 388765 + g 79 -9.2 -4.15328 | opp_overlap 388720 GGAGTTTCCGAAGCC GGGCGGGA TCAA TCCCACCC TTTATGATTTCCATT PAB0268 388870 - 389733 + | hypothetical protein PAB0269 389752 - 390369 + | methlytransferase PAB2081 390773 - 390348 - | acetyl transferase PAB2080 392147 - 390960 - | hypothetical protein TERM 139 391169 - 391197 + g 78 -6.7 -4.61633 | overlap 391150 391196 TGCGTCCCCACTCGG GAACCTTAAGGTT CTT AGCCTCGGGGTTC TTTTTCAAGATGTCT PAB2079 393085 - 392714 - | hypothetical protein PAB3103 393294 - 393055 - | hypothetical protein PAB2078 394681 - 394025 - | hypothetical protein PAB2077 396878 - 395589 - | hypothetical protein TERM 140 395651 - 395678 + g 100 -17.2 -3.40073 | GGGAGTTCCACCTTA GCCATCTGGATT TTTC AATCCAGATGGC TTCATTGGTGGCAGT TERM 141 395771 - 395729 - G 100 -15.7 -4.59773 | gap 2 TCCCATCTGCAAAAA GCCCCCCAGAGC--TTGGAGC ATT GCTCCCATCACTCTGGGGGGC TCTCAAATACAAATT PAB2076 397513 - 396875 - | resolvase related protein PAB0274 398034 - 398783 + | hypothetical protein PAB0275 398780 - 399310 + | hypothetical protein TERM 142 399378 - 399419 + F 70 -8.1 -3.62224 | overlap 399375 CGCACTAAACTTCTT CTTTGAGGTGTGCTTAG ATGATTCC CTATGCCCATCTCAAAG TTCTTCGCAAACTGT PAB0276 399395 - 399868 + | hypothetical protein PAB2075 400269 - 399931 - | hypothetical protein PAB0277 400251 - 400931 + | hypothetical protein PAB0278 400943 - 401272 + | fragment of methionyl-tRNA synthetase PAB2074 401593 - 401288 - | hypothetical protein PAB2073 402344 - 401646 - | aspartate racemase PAB0279 402413 - 402868 + | protein tyrosine phosphatase hsp20 403352 - 402855 - | small heat shock protein TERM 143 403453 - 403474 + H 70 -9.5 -2.72799 | opp_overlap 403453, overlap 403450 TAATCTGAAGTATAA CGTTAAACC ATGA GGTTTGACG TAATCTGTATGGGAA rbsk 403462 - 404343 + | ribokinase PAB2071 405158 - 404340 - | ABC transporter, ATP-binding protein, putative PAB2069 405912 - 405145 - | ABC transporter, ATP-binding protein, puta tive drrA-2 406901 - 405945 - | daunorubicin resistance ATP-binding protein PAB2067 407730 - 406933 - | hypothetical protein PAB2066 409239 - 407734 - | sensory rhodopsin II transducer (HTR-II) (methyl-accepting phototaxis protein II) (mpp-II) PAB2065 409914 - 409258 - | hypothetical protein PAB2064 410787 - 410362 - | hypothetical protein PAB2063 411605 - 411081 - | hypothetical protein TERM 144 411161 - 411181 + g 74 -8.3 -3.89524 | opp_overlap 411161 TATCTTTGTCAATAA CTGGAAGGT GAT GCTTTCCAG TTTCTACCATGAGCT PAB2062 412837 - 411614 - | hypothetical protein PAB2062.1n 412920 - 413162 + | AsnC family transcriptional regulator PAB2061 413470 - 413159 - | signal recognition particle protein Srp19 PAB0282 413514 - 414128 + | hypothetical protein pimT-like 414125 - 414886 + | protein-l-isoaspartate methyltransferase - like PAB2060 415914 - 415417 - | hypothetical protein PAB0284 416235 - 416828 + | hypothetical protein PAB2059 417617 - 416958 - | hypothetical protein TERM 145 417837 - 417848 + G 74 -5.8 -4.7261 | CTACCTCGACCTGTT CCCT GATA AGGG TTTGTTTTGGTGGAT TERM 146 418169 - 418198 + G 76 -7.9 -4.2828 | gap 1, opp_overlap 418169 TGGCAGTTTTAATAA CCGACTGGCTCGTT AGC GATGAGTCAG-CGG TTTTGATAACTGGAC PAB0285 417664 - 418527 + | hypothetical protein PAB2057 419398 - 418490 - | hypothetical protein TERM 147 419364 - 419382 + g 79 -2.5 -5.5604 | gap 1, opp_overlap 419353 419351 419368, overlap 419353 419368 AATAGTAGTTCTTTA GAACCACT TGCT AGTG-TTC TTTTTTCTTCATTCA TERM 148 419368 - 419379 + g 73 -4.4 -4.82661 | opp_overlap 419353 419351 419368, overlap 419353 419364 GTAGTTCTTTAGAAC CACT TGCT AGTG TTCTTTTTTCTTCAT TERM 149 419490 - 419508 + H 86 -4.6 -5.51046 | overlap 419504 ATTAATGTCCTCAAC TTTTCTCA ATG TGCGAAAA TTTTTTCTATATTTC aksA 419656 - 420741 + | trans-homoaconitate synthase leuC-2 420738 - 421880 + | 3-isopropylmalate dehydratase large subunit leuD 421877 - 422368 + | 3-isopropylmalate dehydratase small subunit leuB-2 422356 - 423396 + | 3-isopropylmalate dehydrogenase rimK 423603 - 424424 + | ribosomal protein s6 modification protein argC 424421 - 425413 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 425410 - 426156 + | acetylglutamate kinase argD 426162 - 427256 + | acetylornithine/acetyl-lysine aminotransferase argE 427237 - 428250 + | acetyl-lysine deacetylase TERM 150 428297 - 428286 - f 72 -4.4 -4.81752 | overlap 428287 AAAAAGATGTAAAAA TCCA TGCT TGGA TGGTGAAAGGAAAAT PAB0294.1n 428343 - 428633 + | hypothetical protein tkt1 428617 - 429279 + | transketolase n-terminal section tkt2 429292 - 430245 + | transketolase c-terminal section aroG 430214 - 431011 + | 3-deoxy-7-phosphoheptulonate synthase aroB 430999 - 432015 + | 3-dehydroquinate synthase aroD 432012 - 432659 + | 3-dehydroquinate dehydratase aroE 432656 - 433450 + | shikimate 5-dehydrogenase thrB-2 433428 - 434252 + | shikimate kinase tmpC-like 434296 - 435510 + | membrane lipoprotein (tmpc) TERM 151 435505 - 435528 + F 71 -3.8 -4.95155 | GAAAAGGGTTCGGTT GAGTGAAGTT TTTA ACCTTCTCTC TTTTTCTACTCTCCA rbsA 435555 - 437051 + | ribose ABC transporter, ATP-binding protein TERM 152 437483 - 437506 + G 71 -7.4 -3.97947 | TAGCCTACCTCATAG CTTCCAGGTT CTAT AACCCGGAGG TTTCTCATGAATCAG TERM 153 437935 - 437921 - g 71 -7 -4.13767 | GGGTTGAGCTCAAAA CCGGGG CCC CTCCGG AGCTTGCCGACACTT rbsC-1 437044 - 438033 + | ribose ABC transporter, permease protein rbsC-2 438030 - 438938 + | ribose ABC transporter, permease protein aroA 438967 - 440199 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroC 440189 - 441259 + | chorismate synthase trpA 441991 - 441245 - | tryptophan synthase subunit alpha trpB-1 443150 - 441984 - | tryptophan synthase subunit beta trpF 443763 - 443137 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 154 443571 - 443584 + g 70 -2.3 -4.93968 | TCTCTATCGCAACCT CCCAG TCTT CTCGG TTTTTCATTGTGGAT trpG 444335 - 443763 - | anthranilate synthase component II trpE 445636 - 444332 - | anthranilate synthase component I TERM 155 444432 - 444445 + g 70 -5.2 -4.4195 | ACAATGCCAGCCCCA GCCC TAACAT GGGC TTTTCTACCCTCTAT trpD 446592 - 445618 - | anthranilate phosphoribosyltransferase TERM 156 445817 - 445831 + g 70 -10 -3.06183 | TTTATCCTCTCGGCG CTCTCC TGG GGAGAG TTGCATGGAACTACC trpC 447275 - 446586 - | indole-3-glycerol-phosphate synthase TERM 157 446969 - 446992 + g 80 -6.6 -4.74917 | opp_overlap 446969, overlap 446961 TCGTTATGAGTAGAA CAGCCGATCC TCCA GCTTCGGCTG TTTTCTCTATTTCCT PAB2042 447806 - 447348 - | hypothetical protein PAB2041 448969 - 447803 - | hypothetical protein TERM 158 448961 - 448980 + g 77 -10.8 -3.30771 | TGTTTTCCTCCATCG TTTCCGCA AGAA TGCGGAAA TTATAAAGAATCTAG aif2G 450260 - 449025 - | translation initiation factor IF-2 subunit gamma PAB2039 451358 - 450330 - | tRNA-modifying enzyme pfpI 451483 - 451983 + | intracellular protease PAB0312 452042 - 452761 + | hypothetical protein PAB0313 452754 - 453671 + | hypothetical protein hpyA1-2 453899 - 454102 + | histone A2/ histone A1 PAB0314 454151 - 455428 + | hypothetical protein PAB0315 455913 - 456311 + | hypothetical protein PAB0316 456311 - 457654 + | DNA primase mpg 457725 - 458810 + | mannose-1-phosphate guanyltransferase pmm-like 458725 - 459528 + | phosphomannomutase related protein tdk 459541 - 460158 + | thymidylate kinase TERM 159 461475 - 461461 - g 71 -7.2 -4.0251 | ATCAGTACAATCAAA TGAAGA AGT TCTTCA AGAGCATGAATAAGA srp54 460197 - 461528 + | signal recognition particle protein Srp54 PAB7115 461528 - 461758 + | AsnC family transcriptional regulator TERM 160 461825 - 461803 - g 74 -7.1 -4.33258 | gap 1, opp_overlap 461803 ACTGGCAAAGATAAA CCTCAAGACT GGAG AG-CTTGAGG TTGTTGATGAAGATT PAB0321 461771 - 462199 + | hypothetical protein PAB0322 462249 - 462692 + | leucine-responsive-regulatory protein PAB2035 463402 - 462689 - | adenine phosphoribosyltransferase gltX 464160 - 465875 + | glutamyl-tRNA synthetase PAB0324 465850 - 466203 + | hypothetical protein TERM 161 466296 - 466311 + F 70 -5.4 -4.33151 | overlap 466298 GTCGTTAGATATTAG GAGGGA ATGG TTCCTC TTTTCCCTTGTGATC TERM 162 466743 - 466755 + G 76 -9.1 -3.70811 | opp_overlap 466743 CCTGGAGTTCATTAA GGGGA TGC TCCCC TTTACCCTTCTCTGG TERM 163 467292 - 467310 + G 73 -7.4 -4.09285 | overlap 467307 GCTCCTCTACATCAT GGTGGCCA CTT TGGTTACC TTTGGTATTTTCCTA PAB0325 466321 - 467430 + | hypothetical protein fum-2 468861 - 468364 - | fumarate hydratase TERM 164 468815 - 468849 + g 72 -6.6 -4.27617 | gap 1, opp_overlap 468824 468825, overlap 468816 TCGCCAACTTTGAGC TTCAGAACATCCTCT GGGGAG AGGGGA-GTTCTGAG TTTTACTGCCATATC fum-1 469667 - 468852 - | fumarate hydratase PAB0328 469703 - 470410 + | oxidoreductase PAB0329 470883 - 471236 + | hypothetical protein TERM 165 471588 - 471601 + G 73 -2.4 -5.1963 | CCATCGAGGGCCCAT CCAA CGTCCC TTGG TTTTTGTTGGTTGCC PAB0330 471233 - 471880 + | hypothetical protein PAB0331 471874 - 472218 + | hypothetical protein PAB2029 473161 - 472190 - | hypothetical protein PAB0333 473309 - 474088 + | hypothetical protein TERM 166 475447 - 475464 + G 70 -9.9 -3.06315 | opp_overlap 475442, overlap 475449 GAATTGGAAAGGTCA TAGCCTC GATA GAGGCTA TCTTCGGAATGTTCA PAB0334 474081 - 475526 + | hypothetical protein PAB0335 475528 - 476667 + | hypothetical protein TERM 167 477067 - 477045 - g 77 -11.2 -3.21276 | opp_overlap 477044 477043, overlap 477043 TTGGTTCTTATAATA GGCGGACCCA TAG CGGTTCCGCC GGTTTACGAGGACAT TERM 168 477220 - 477235 + G 83 -10.4 -3.72695 | TAGTCGTCGTCCACG GCTGGG ATTA CCCAGC TTTAATGGAGGCGAT PAB0336 476781 - 477881 + | hypothetical protein TERM 169 478460 - 478444 - g 79 -9.5 -3.70773 | overlap 478449 TGGGATATTCAAGAA GATTAGG ATT CCTAATC CGATAATAGTCAAAG PAB0337 477878 - 478963 + | hypothetical protein PAB2026 480127 - 478964 - | GTP-binding protein PAB0339 480234 - 480911 + | metal-dependent hydrolase PAB7122 481178 - 480900 - | hypothetical protein dpa 482139 - 481171 - | signal recognition particle receptor TERM 170 483192 - 483175 - H 87 -8.5 -4.54449 | ACACTTGACAGAAAA TTACCAC TATT GTGGTAA ACAGAAAACGAAAAA korD 483505 - 483810 + | 2-ketoglutarate ferredoxin oxidoreductase, subunit delta korA-1 483813 - 485003 + | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha korB-1 485000 - 485854 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 171 486350 - 486334 - g 72 -6.5 -4.2586 | GGAGATCAACATAAA GGCCTTT AGG AAGGGCC TGGAGGTGGGAAGGG korG-1 485858 - 486370 + | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma TERM 172 486358 - 486383 + F 91 -13.4 -3.14051 | overlap 486356 486363 GAAGGGCCTGGAGGT GGGAAGGGAA TGAGGT TTCCCTTCCC TGTTGGTAAAGCTGA korA-2 486367 - 487524 + | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha korB-2 487521 - 488366 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta korG-2 488354 - 488911 + | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma PAB0349 488991 - 490040 + | iron (III) ABC transporter, periplasmic-binding protein, putative PAB2022 490503 - 490042 - | small multidrug export related protein (qace) PAB2021 491047 - 490490 - | acid phosphatase precursor related protein PAB2020 491619 - 491044 - | hypothetical protein PAB2019 492295 - 491579 - | hypothetical protein glyA 493629 - 492346 - | serine hydroxymethyltransferase PAB0350 493815 - 494597 + | ABC transporter ATP-binding protein TERM 173 494951 - 494981 + G 75 -11.2 -3.05384 | opp_overlap 494977 TCATGGCCTCTAGAC CTTACTTTGCCCTC TCC GAGAGCATAGTAAG TTACCTCACGGGAGA PAB0351 494599 - 495429 + | ABC transporter rnhB 495426 - 496100 + | ribonuclease HII PAB2015 497495 - 496062 - | hypothetical protein moeA-2 498739 - 497552 - | molybdenum cofactor biosynthesis protein PAB2013 500136 - 498781 - | ADP-specific phosphofructokinase trub 500249 - 501253 + | H/ACA RNA-protein complex component Cbf5p PAB0357 501232 - 501636 + | hypothetical protein PAB2010 502737 - 501598 - | hypothetical protein PAB2009 503323 - 502802 - | hypothetical protein TERM 174 503901 - 503876 - g 70 -9.1 -3.46936 | gap 1, opp_overlap 503876, overlap 503874 AAAGTTTATTAAAGA CCT-GATGAAGG ACA CCTTCACCGAGG TAGTTGAGTTGGCGA PAB0359 503367 - 503954 + | hypothetical protein rps13p 504055 - 504501 + | 30S ribosomal protein S13P rps4p 504521 - 505063 + | 30S ribosomal protein S4 TERM 175 505358 - 505331 - g 70 -4.8 -4.4078 | gap 1, overlap 505335 505337 CTGGTGGAAGTAAAA GCAAGA-CTCCTG GCC CAGGAGCTCAAGC GGCTATAAGAGCCCT TERM 176 505351 - 505337 - g 73 -10 -3.45152 | overlap 505335 505331 GAAGTAAAAGCAAGA CTCCTG GCC CAGGAG CTCAAGCGGCTATAA rps11p 505060 - 505473 + | 30S ribosomal protein S11P TERM 177 505729 - 505753 + G 86 -14.4 -2.74563 | CCCCAGTTGATAGGT TCGAGCTCGA TGCCC TCGAGCTCGA TGATTACACTGTAAC rpoD 505506 - 506285 + | DNA-directed RNA polymerase subunit D rpl18E 506452 - 506814 + | 50S ribosomal protein L18e rpl13p 506821 - 507249 + | 50S ribosomal protein L13P rps9p 507266 - 507673 + | 30S ribosomal protein S9P rpoN 507718 - 507915 + | DNA-directed RNA polymerase subunit N rpoK 508036 - 508209 + | DNA-directed RNA polymerase subunit K eno-like 508216 - 509244 + | hypothetical protein TERM 178 509494 - 509456 - g 72 -10.4 -2.91264 | GGTTCGATCCACAGA GCATCTTGGCCGT-GAGC GTTAG GCTCTACGGCC-AGAAGC CCGTTAAAAAGTTTG rps2P 509260 - 509868 + | 30S ribosomal protein S2 thrC-like 509908 - 510939 + | threonine synthase PAB0370 510974 - 511849 + | hypothetical protein PAB0371 511852 - 512226 + | hypothetical protein mvk 512229 - 513236 + | mevalonate kinase argB-like 513233 - 513997 + | acetylglutamate kinase, putative lig 515682 - 514003 - | ATP-dependent DNA ligase TERM 179 515323 - 515341 + g 71 -9.6 -3.27476 | overlap 515307 CTCGGCAACTTTGAC GAGGGTTT GGT AGACCCTC TTAATCGTTAAGGGT PAB2001 516155 - 515724 - | hypothetical protein PAB0376 516055 - 516555 + | hypothetical protein PAB2000 518135 - 517023 - | hypothetical protein spoIIM-like 516552 - 517112 + | stage II sporulation protein m related PAB0378 518382 - 519638 + | udp-n-acetyl-d-mannosaminuronic acid dehydrogenase wlbD 519635 - 520780 + | udp-n-acetylglucosamine 2-epimerase PAB1999 521459 - 520758 - | hypothetical protein PAB1998 522832 - 521573 - | molybdenum cofactor biosynthesis protein a related glyS 522896 - 524611 + | glycyl-tRNA synthetase TERM 180 524833 - 524817 - f 83 -9.5 -3.80841 | ATCATGAGTATGAAA CTTGTGA GGC TCACAAG AGAAAAGACATATAT TERM 181 525432 - 525422 - g 74 -6.8 -4.22948 | AAAAGCTACCTAAAA TGGG ATC CCCA ATGTCAGCTAAAATT PAB0381 525421 - 525936 + | hypothetical protein PAB1994 526311 - 525925 - | hypothetical protein PAB0382 526454 - 526930 + | pyruvoyl-dependent arginine decarboxylase PAB1992 527696 - 526914 - | hypothetical protein PAB1991 528583 - 527834 - | atp-binding protein phnp (phnp) TERM 182 528061 - 528085 + g 79 -9.5 -3.6944 | opp_overlap 528063, overlap 528059 TAGCTAATCTTAGAG GAGATAGTTTT TCC AAAATTATCTC TGTTTCTCTTGGAAG PAB1990 529955 - 528609 - | hypothetical protein ino1 531170 - 530010 - | myo-inositol-1-phosphate synthase related TERM 183 533297 - 533341 + G 70 -9.4 -3.44794 | gap 2, opp_overlap 533296 533297 533302, overlap 533302 CCCAGATGCAGTAAG CCAAAGGG-CCAAGCAGA-GAG GAG CTCCTCAGCTTGGATCCCTTGG TTCTGGTAATCACTT PAB0383 531438 - 534188 + | hypothetical protein TERM 184 534179 - 534197 + F 77 -6 -4.62904 | overlap 534182 GCCCATAGGAGTGGC GAAGGG CTGATGC CCCTTC TTTTTAAACCTCTTT PAB0384 534188 - 535663 + | hypothetical protein PAB0385 535650 - 536003 + | ribonuclease P protein component 4 minD-1 537024 - 536242 - | cell division inhibitor TERM 185 537195 - 537184 - g 91 -2.2 -5.85425 | GAAAGAAAGAAAAAA CCCA TAGA TGAG TTTCCTTGGCAGGAA PAB0387 537163 - 537555 + | hypothetical protein deoA 539075 - 537552 - | thymidine phosphorylase PAB1981 539741 - 539106 - | dolichyl-phosphate mannose synthase related protein PAB0389 540019 - 540543 + | hypothetical protein TERM 186 540960 - 540976 + GF 75 -10.1 -3.04263 | opp_overlap 540958, overlap 540962 GGCGTTTTAAGGAGC GAGGTCG GTG CGGCCTC TCTTAGCGCTAGCGT napA-2 540498 - 541778 + | Na+/H+ antiporter TERM 187 543295 - 543327 + G 85 -6.3 -5.14645 | opp_overlap 543299, overlap 543296 543299 CAGAGAGTCTACCAG GCAATGCTTGACC GTGGTTG GGTCAAGCACTGA TTTTTCTTCCCTTAT TERM 188 543296 - 543326 + G 79 -9.8 -3.6716 | opp_overlap 543299, overlap 543295 543299 AGAGAGTCTACCAGG CAATGCTTGACC GTGGTTG GGTCAAGCACTG ATTTTTCTTCCCTTA TERM 189 543323 - 543299 - g 70 -10.1 -3.09834 | opp_overlap 543296 543295 543299 GAGTCTACCAGGCAA TGCTTGACC GTGGTTG GGTCAAGCA CTGATTTTTCTTCCC gdh 542065 - 543327 + | glutamate dehydrogenase (NAD(P)+) PAB0392 543435 - 543860 + | transcriptional regulatory protein, AsnC f amily fbp 543976 - 544497 + | ferripyochelin binding protein PAB0394 544494 - 545288 + | hypothetical protein PAB1975 545833 - 545285 - | dCMP deaminase, putative htpX 546673 - 545876 - | heat shock protein PAB1973 547051 - 546683 - | hypothetical protein PAB1972 547452 - 547096 - | hypothetical protein PAB1971 548320 - 547457 - | dolichyl-phosphate mannose synthase PAB0396 548383 - 549636 + | peptide chain release factor 1 trpB-2 550981 - 549626 - | tryptophan synthase subunit beta PAB1969 551950 - 551102 - | dipeptide transport protein dppa hypA 552009 - 552428 + | hydrogenase nickel incorporation protein mrp-like 552428 - 553156 + | ATP-binding protein PAB1968 553661 - 553140 - | mutator protein MutT (mutT) PAB1967 554479 - 553694 - | hypothetical protein PAB0401 554531 - 555148 + | hypothetical protein PAB1965 555998 - 555135 - | hypothetical protein TERM 190 555876 - 555906 + g 73 -4.6 -4.74132 | CTCGTGGTATTCCCT GGCTATGAGCTTAG CAG CTAGGAACATCGCC TTTTTCCTAAGCTCT hypE-like 556052 - 557032 + | hydrogenase expression/formation related protein PAB1962 558023 - 556992 - | hypothetical protein PAB1961 558484 - 558011 - | hypothetical protein PAB1960 559479 - 558472 - | putative protease aif1A 559600 - 559947 + | translation initiation factor IF-1A PAB0405 559953 - 560753 + | hypothetical protein PAB0406 560726 - 561391 + | putative RNA-processing protein top6B 561401 - 563095 + | DNA topoisomerase VI subunit B top6A 563070 - 564218 + | DNA topoisomerase VI subunit A PAB2412 564225 - 565472 + | hypothetical protein PAB2413 565469 - 565888 + | hypothetical protein PAB0411 565878 - 566462 + | hypothetical protein PAB1956 567786 - 566440 - | antibiotic/peptide maturation related protein PAB1955 569155 - 567779 - | tldd related protein PAB0414 569273 - 570442 + | hypothetical protein PAB1954 571464 - 570400 - | hypothetical protein TERM 191 571488 - 571466 - H 90 -13.4 -2.9155 | opp_overlap 571466, overlap 571461 GGGTTGAATAGCATA CCCTCACCAG TTA CTGGTGGGGG TTTAACCTTATACGT TERM 192 571466 - 571488 + H 100 -15.6 -3.69621 | opp_overlap 571461 571466 GGGTTGAATAGCATA CCCTCACCAG TTA CTGGTGGGGG TTTAACCTTATACGT PAB3148 571553 - 571729 + | hypothetical protein PAB0415 571740 - 572372 + | hypothetical protein TERM 193 572759 - 572773 + G 76 -8.6 -4.07885 | opp_overlap 572759 572761 TTGGTAGCCTATATA TAGTGC TCA GCACTA TTTTCAAGGCCGATC PAB0416 572437 - 573537 + | hypothetical protein PAB2435 574034 - 573534 - | hypothetical protein TERM 194 574519 - 574493 - g 72 -10.8 -2.88544 | overlap 574495 574497 CTTGAGGCCCAGATA CACAGGCTAACC TAT GGTGAGCCCGCG CCATTGGCCGTGATA TERM 195 574517 - 574495 - g 70 -9.8 -2.99471 | overlap 574493 574497 TGAGGCCCAGATACA CAGGCTAACC TAT GGTGAGCCCG CGCCATTGGCCGTGA psmA 574193 - 574975 + | proteasome subunit alpha TERM 196 574959 - 574975 + F 85 -5.9 -5.2197 | AGGATTACTCAGAGC TCGATAG CCA CTATTGA TTTTTCATTTTTGTG PAB0418 575003 - 575713 + | putative RNA-associated protein TERM 197 575745 - 575757 + GF 72 -9.1 -3.33696 | opp_overlap 575736 575743 AAATAGGGAACTAGT CGTCC CTG GGACG TTACTTGCCCAGGGG PAB0419 575710 - 576507 + | exosome complex RNA-binding protein Rrp4 rph 576482 - 577231 + | exosome complex exonuclease Rrp41 TERM 198 577430 - 577417 - g 70 -2.3 -5.06414 | TGGTTGGAATAAAAA CTAGC CTTG GCGAG CCCTTCCCAGACACC PAB0421 577224 - 578048 + | exosome complex RNA-binding protein Rrp42 TERM 199 578221 - 578252 + F 72 -8.7 -3.53444 | opp_overlap 578199, overlap 578204 CGGGGCTCCAAGAGG GGCCGTAGGGTAG CTTGGT CTATCCTGCGGGC TTTGGGAGCCCGTGA PAB0422 578401 - 579030 + | hypothetical protein rpoH 579272 - 579520 + | DNA-directed RNA polymerase subunit H TERM 200 580743 - 580716 - g 70 -9.2 -3.44622 | CAGGTTCATAAGGAA CTCGATAAGACC CGAC GTTCTTACCGAG AGGATTGAGCATGCT rpoB 579538 - 582891 + | DNA-directed RNA polymerase subunit beta TERM 201 583814 - 583802 - g 76 -7.7 -4.23723 | overlap 583795 GAAGACCACTTAAAA CGTTG GCT CAACG TCTGAAGGGTAAGGA rpoA1 582895 - 585618 + | DNA-directed RNA polymerase subunit alpha TERM 202 586058 - 586044 - g 70 -10 -2.96274 | overlap 586046 GTGGCGAGAAGGATA GAGGGT ACA ACCCTC GAAAACTTGGCGAGA TERM 203 586733 - 586761 + G 71 -9.6 -3.20164 | gap 1, opp_overlap 586722, overlap 586735 AAACGTCCTCATAGG GCA-GCCCGTTCC AGTG GGAACGGGCATGG TTAAGTTGACTATGA TERM 204 586735 - 586758 + G 79 -12.4 -2.79188 | overlap 586733 ACGTCCTCATAGGGC AGCCCGTTCC AGTG GGAACGGGCA TGGTTAAGTTGACTA rpoA2 585624 - 586817 + | DNA-directed RNA polymerase subunit A'' rpl30E 586821 - 587120 + | 50S ribosomal protein L30e nusA 587129 - 587566 + | transcription elongation factor NusA-like protein rps12P 587577 - 588020 + | 30S ribosomal protein S12P TERM 205 588391 - 588375 - g 72 -8.7 -3.71883 | opp_overlap 588375 588378, overlap 588365 588368 588378 GAAGAGAACCGGAAA GAACCCG ATC CAGGTTC TAGTCTGGGCCATCG rps7P 588025 - 588672 + | 30S ribosomal protein S7P PAB0429 588701 - 589066 + | peptidyl-tRNA hydrolase truD 589073 - 590293 + | tRNA pseudouridine synthase D PAB1947 591767 - 590832 - | proliferating-cell nucleolar antigen P120, putative TERM 206 591599 - 591627 + g 73 -7.5 -4.06502 | opp_overlap 591594 591595 CTAGCTCAAACTTCT CCTCAAGGAGA GCCTTTA TCTCCTTAAGG TTTCCTTTGAGGGTG PAB1946 592205 - 591777 - | hypothetical protein PAB0431 592265 - 593518 + | hypothetical protein PAB1945 594526 - 593519 - | atp-binding protein TERM 207 594660 - 594627 - H 75 -7.8 -3.99013 | gap 1 CAAAAACCTTATAAA TGTAAAG-TTTCTTT TACGT AAAGAAAACTTTACA TGGTGGATGGAATGA TERM 208 594692 - 594678 - g 71 -7.8 -3.93288 | GTGGATGGAATGAAA GAGAGG CTT CCCCTC CTAGCGATAGTGGCC PAB0432 594660 - 595043 + | hypothetical protein PAB7155 595045 - 595266 + | repressor protein, putative PAB0433 595263 - 595610 + | hypothetical protein PAB0434 595598 - 596332 + | atp-binding transport protein TERM 209 596788 - 596776 - g 77 -9.1 -3.97511 | TAGTTAATATAATAA GCGAG GAG CTCGC TAAGCTGAAGATAAA PAB0435 596325 - 597587 + | hypothetical protein PAB1944 598102 - 597590 - | hypothetical protein PAB1943 599130 - 598102 - | RNA 3'-terminal-phosphate cyclase PAB1942 600290 - 599127 - | hypothetical protein PAB0437 600398 - 601444 + | aminopeptidase PAB0438 601485 - 601835 + | hypothetical protein nac 601974 - 602303 + | nascent polypeptide-associated complex protein PAB1940 603647 - 602283 - | hypothetical protein TERM 210 603501 - 603524 + g 76 -5.3 -4.7373 | CTTTATGATGTAGAG GGTTCCCTT CTTGAC AAGGGGATC TTTTTCCTGGAGTGC PAB1939 605047 - 603644 - | hypothetical protein TERM 211 604027 - 604047 + g 77 -10.5 -3.38522 | overlap 604025 AGAGCACATATGCTT CGGCAATAG CCT TTATTGCCG TGTTTCGAATCCATG TERM 212 604244 - 604255 + g 74 -5.8 -4.70659 | CTTAGCTAACGTTGC CACG ACCT CGTG TTTTTCCATCTCGAA PAB1938 605570 - 605115 - | AsnC family transcriptional regulator snrnp 605707 - 605934 + | small nuclear ribonucleoprotein rpl37e 605946 - 606134 + | 50S ribosomal protein L37e PAB1937 607528 - 606146 - | hypothetical protein pyrD 608533 - 607622 - | dihydroorotate dehydrogenase 1B neac 608583 - 609860 + | N-ethylammeline chlorohydrolase TERM 213 610021 - 610033 + G 80 -5.5 -4.94902 | GGAGGATGCCTACCT GGCTG GAT TAGCC TTTTTCTCCTCATTC PAB0444 609857 - 610816 + | hypothetical protein PAB0445 610800 - 611360 + | hypothetical protein TERM 214 612378 - 612396 + G 79 -10.3 -3.54459 | opp_overlap 612389 TCTTAAGGGATCTCC CCCAGGA TAAGT TCCTGGG TTTAGGAAAAGTTAC agpa 611357 - 613864 + | Alpha-glucan phosphorylase PAB1933 614690 - 613884 - | stomatin-like protein PAB1932 616009 - 614687 - | nodulation protein nfed PAB1931 617404 - 616082 - | NADH oxidase (noxA-2) TERM 215 617571 - 617552 - R 79 -5 -5.09204 | opp_overlap 617543 AGAGGGGAAGAAAAA CTAAGAGG TTTG CTTCTTAG TCAGCATCTCTTGGA PAB1930 618841 - 617552 - | thiamine biosynthesis protein ThiC TERM 216 617697 - 617681 - G 75 -9.5 -3.53811 | opp_overlap 617673 CTTATCCTTGTCAAA GGCAATT TCA AATTGCC TAGCCCAGTTTAAGT PAB1929 620803 - 618902 - | ABC transporter ATP-binding protein PAB1928 622097 - 621363 - | hypothetical protein PAB0452 620871 - 621425 + | virR related PAB1927 622464 - 622108 - | hypothetical protein PAB1926 622901 - 622518 - | hypothetical protein ccrB 623278 - 622907 - | camphor resistance protein CrcB drrB 624089 - 623316 - | daunorubicin resistance membrane protein drrA-1 625072 - 624086 - | daunorubicin resistance ATP-binding protein PAB1922 625457 - 625059 - | hypothetical protein PAB1921 626973 - 625678 - | 4-aminobutyrate aminotransferase TERM 217 625967 - 625981 + g 72 -5.6 -4.44461 | TTGAGCCTCTTCATG GCGTGG TTT CCAAGC TTTTCTGCCCTTCTT PAB0458 627080 - 627517 + | hypothetical protein nth 627486 - 628154 + | endonuclease III PAB1920 628771 - 628133 - | hypothetical protein TERM 218 628686 - 628660 - G 80 -5.8 -5.03994 | overlap 628661 628683 CTTCATAGATAAAAA CCGCCGTGATGA TAA TCATCAAGGAGA ACGTCCCGGGAAAGT TERM 219 629132 - 629093 - g 70 -10 -2.98947 | overlap 629090 CCCAAGCAAGAAGGA GCTTGGAGCTGCAGCC GGAATTGA GGTTGCAGCCGCAAGC GTAGCTATAATCGAG rpl7ae 628824 - 629210 + | 50S ribosomal protein L7Ae TERM 220 629221 - 629189 - f 86 -12 -3.37053 | opp_overlap 629187 629194 AGAGATTGCAATGAA GGTTAGGGAGCTCA TGAAG TGAGCTCCCTTTCC CCTTTCCTTACCTCA TERM 221 629194 - 629216 + F 100 -14.2 -3.74178 | opp_overlap 629189, overlap 629187 TTGCAATGAAGGTTA GGGAGCTCAT GAA GTGAGCTCCC TTTCCCCTTTCCTTA rps28e 629258 - 629473 + | 30S ribosomal protein S28e rpl24E 629479 - 629682 + | 50S ribosomal protein L24e PAB0461 629735 - 630571 + | hypothetical protein TERM 222 631058 - 631038 - T 93 -9.7 -4.68511 | overlap 631041 631050 GTTAACATAAAGAAA GAGGAGCTC AAA GAGCTCGTC AAGCTCGTGAGGGAG TERM 223 631055 - 631041 - T 75 -10 -2.95009 | overlap 631038 631050 AACATAAAGAAAGAG GAGCTC AAA GAGCTC GTCAAGCTCGTGAGG PAB1919 631485 - 631057 - | hypothetical protein PAB0462 631705 - 632556 + | cation efflux system protein (zinc/cadmium) TERM 224 633345 - 633327 - g 73 -10.3 -2.94747 | opp_overlap 633312 633327 CGACTTGAGGAGATA CCTCGAG GAGTT CTCGAGG TTTTCCCAGGACTTT TERM 225 633327 - 633345 + G 89 -11 -4.0896 | opp_overlap 633327, overlap 633312 CGACTTGAGGAGATA CCTCGAGG AGT TCTCGAGG TTTTCCCAGGACTTT TERM 226 633754 - 633739 - g 72 -2.6 -5.0538 | gap 1, overlap 633740 633741 GTTGATTTGAAAAAA GCTAAGG CTC CCTTA-C TTAAAAGATATAACT PAB0463 632668 - 633771 + | hypothetical protein TERM 227 634218 - 634201 - g 72 -4.9 -4.58395 | gap 1 TTTATCGGCTAAAAA GGCTATTC CCG GAA-AGCC AAGGGCTACTCCATA PAB0463.1n 633875 - 634234 + | hypothetical protein PAB0463.2n 634928 - 634224 - | hypothetical protein PAB0463.3n 635718 - 635047 - | hypothetical protein PAB1916 636638 - 635889 - | lipoate-protein ligase a related tuf 636920 - 638206 + | elongation factor 1-alpha TERM 228 638192 - 638217 + F 71 -6.1 -4.15577 | opp_overlap 638194 638197, overlap 638194 ATGGTTATCTCAATC CAGAAGGGTGA GTGA TCTCCCTTCTC TTCTTTAATTCTTGG TERM 229 638194 - 638215 + F 73 -8.7 -3.65809 | opp_overlap 638194 638197, overlap 638192 GGTTATCTCAATCCA GAAGGGTGA GTGA TCTCCCTTC TCTTCTTTAATTCTT rps10p 638243 - 638551 + | 30S ribosomal protein S10P tfb 639635 - 638733 - | transcription initiation factor IIB TERM 230 639124 - 639134 + g 74 -6.8 -4.26903 | opp_overlap 639124 CTAATTTCGTCAAGA GTCC TCG GGAC TTTTAATAGCCTACA PAB0467 639776 - 640135 + | ribonuclease P protein component 2 pelA 640145 - 641215 + | cell division protein pelota TERM 231 641345 - 641325 - g 78 -11.9 -2.93991 | opp_overlap 641324 641323 TCGAATTCAAGGATA CTCCAAGCC CAG AGCTTGGAG ACTTTGGGACTCCCG argS 641228 - 643105 + | arginyl-tRNA synthetase PAB0469.1n 643535 - 643107 - | hypothetical protein egsA 644588 - 643548 - | NAD(P)-dependent glycerol-1-phosphate dehydrogenase PAB0472 644827 - 645630 + | hypothetical protein PAB0473 645635 - 645994 + | hypothetical protein PAB0474 646000 - 646590 + | hypothetical protein TERM 232 646584 - 646605 + F 85 -8.7 -4.3587 | TCTCATCGAAAAGGT GGTTTAGGC AATT GCCGAAACC TTTATATTCTTCCTG PAB0475 646636 - 647355 + | hypothetical protein PAB1906 648129 - 647347 - | hypothetical protein PAB1905 648631 - 648191 - | hypothetical protein TERM 233 648314 - 648326 + g 72 -6.2 -4.25256 | TTGACTAAGCTCTAT GGCC CTTCT GGCC TTCTTTTCATCAACG TERM 234 649174 - 649163 - g 73 -4.4 -4.7657 | CAAAAAGGCCAAAAA GGAA GGCA TTCC GGTTTACGCTCGCAT PAB0476 648684 - 649517 + | hypothetical protein PAB1904 649965 - 649519 - | hypothetical protein PAB1903 651911 - 649962 - | hypothetical protein PAB1902 653815 - 651914 - | glutamyl-tRNA(Gln) amidotransferase subunit E asnA 655128 - 653812 - | glutamyl-tRNA(Gln) amidotransferase subunit D PAB1900 656362 - 655178 - | hypothetical protein PAB1900.1n 656626 - 656381 - | hypothetical protein scrk 656671 - 657588 + | fructokinase PAB1899 660976 - 657848 - | molybdenum cofactor biosynthesis MoaA PAB0485 661177 - 661683 + | putative monovalent cation/H+ antiporter subunit E PAB3171 661680 - 661934 + | putative monovalent cation/H+ antiporter subunit F PAB0486 661931 - 662326 + | putative monovalent cation/H+ antiporter subunit G PAB0486.1n 662323 - 662607 + | hypothetical protein PAB2415 662611 - 663318 + | putative monovalent cation/H+ antiporter subunit B PAB0488 663315 - 663659 + | putative monovalent cation/H+ antiporter subunit C TERM 235 663939 - 663917 - g 70 -9.2 -3.38812 | opp_overlap 663917, overlap 663915 663936 663937 TTCGTTCTAATAATA GCGGTTGTAA GCT TTATAACCGC TGTATTCAGCGTCAA TERM 236 663917 - 663939 + G 75 -11.4 -3.07895 | opp_overlap 663917 663915 663936 663937 TTCGTTCTAATAATA GCGGTTGTAA GCT TTATAACCGC TGTATTCAGCGTCAA nuoN 663656 - 665137 + | NADH dehydrogenase subunit N nuoM 665134 - 666990 + | NADH dehydrogenase subunit M nuoH 666994 - 667923 + | NADH dehydrogenase I, subunit H nuoB 667925 - 668512 + | NADH dehydrogenase subunit B nuoC 668509 - 669033 + | NADH dehydrogenase subunit C nuoD 669035 - 670219 + | NADH dehydrogenase subunit D nuoI 670216 - 670860 + | NADH dehydrogenase subunit I dfp 672062 - 670857 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 237 674033 - 674045 + G 86 -9.1 -4.41494 | overlap 674028 ACCTCAATATGCGGA CCAGC TTC GCTGG TTTTAGTTGCAGCTA PAB0498 672164 - 674086 + | hypothetical protein PAB1895 675362 - 674073 - | hypothetical protein PAB1894 675870 - 675454 - | NADH-plastoquinone oxidoreductase subunit PAB1893 676832 - 675867 - | CO-induced hydrogenase related, subunit K TERM 238 676576 - 676566 - G 76 -8.2 -4.11371 | overlap 676556 GAACAGGGGTGAAAA CCCC ATC GGGG TGTAAGCCAATAATG PAB1892 678117 - 676837 - | CO-induced hydrogenase related, subunit H PAB1891 678641 - 678114 - | hydrogenase related, subunit PAB1890 679150 - 678638 - | CO-induced hydrogenase related, subunit L PAB1889 679511 - 679155 - | hypothetical protein PAB1888 681036 - 679504 - | putative monovalent cation/H+ antiporter subunit D PAB1887 681395 - 681033 - | putative monovalent cation/H+ antiporter subunit C PAB1886 681826 - 681383 - | putative monovalent cation/H+ antiporter subunit B PAB1886.1n 682118 - 681819 - | hypothetical protein PAB1885 682727 - 682362 - | putative monovalent cation/H+ antiporter subunit G PAB3177 683011 - 682724 - | putative monovalent cation/H+ antiporter subunit F PAB1884 683490 - 682987 - | putative monovalent cation/H+ antiporter subunit E trxB 683671 - 684708 + | thioredoxin reductase gabT 684804 - 686168 + | 4-aminobutyrate aminotransferase TERM 239 686167 - 686178 + T 78 -3 -5.36689 | GATACAAGATTCACT GAAT TTCT ATTC TTTTGTTTTTAGTTT PAB1881 688808 - 686220 - | hypothetical protein PAB1880 689142 - 688768 - | hypothetical protein PAB2394 690022 - 689321 - | phosphoglycolate phosphatase TERM 240 690170 - 690204 + H 70 -9.8 -2.63252 | overlap 690169 690166 CGCCCGGGGCTTCGA GCCCGAACCGCCTCCC ATG GGGAGGCTGATGGCGC CTATTCTTGAGAACT PAB0502 690235 - 691089 + | hypothetical protein PAB0503 691080 - 691424 + | hypothetical protein PAB0504 691378 - 691773 + | hypothetical protein PAB0505 691805 - 692797 + | hypothetical protein rad2 693812 - 692781 - | flap endonuclease-1 PAB1876 694303 - 693908 - | hypothetical protein dppF 695312 - 694332 - | dipeptide ABC transporter, ATP-binding protein PAB1874 696312 - 695323 - | peptide ABC transporter atp-binding protein dppC 697459 - 696296 - | dipeptide ABC transporter, permease protein PAB1872 698468 - 697470 - | dipeptide ABC transporter, permease protein dppA 700716 - 698599 - | dipeptide ABC transporter, dipeptide-binding protein pyrH 701626 - 700949 - | uridylate kinase PAB1869 702958 - 701639 - | threonine synthase PAB1868 704918 - 702963 - | mRNA 3'-end processing factor, putative PAB1867 705547 - 704924 - | proteasome, subunit beta PAB1866 706240 - 705626 - | hypothetical protein PAB1865 707133 - 706237 - | hypothetical protein TERM 241 706761 - 706781 + g 82 -5.5 -5.19251 | overlap 706764 TTACTGTCATGTGCG GAATTATCT CTG AGATAAGTC TTTTTATTGATGTTA TERM 242 706937 - 706950 + g 74 -3.9 -5.0916 | GTAAAATCGATTGGG GATAT TATG ATATC TTTTTCTATTCCACC slyD 707970 - 707170 - | FKBP-type peptidyl-prolyl cis-trans isomerase (slyD) dys1 708031 - 709038 + | putative deoxyhypusine synthase PAB1862 709777 - 709025 - | hypothetical protein PAB1861 711643 - 709829 - | hypothetical protein TERM 243 710954 - 710971 + g 86 -11.3 -3.67417 | overlap 710968 GACCTTTGTAGTGGT GACCCCA GTAA TGGGGTC TTTGGCCTTAACTGT PAB1860 712616 - 711816 - | hypothetical protein PAB1859 713664 - 712618 - | pyruvate formate-lyase activating enzyme related protein apbA 713721 - 714623 + | 2-dehydropantoate 2-reductase PAB0513 714620 - 715258 + | hypothetical protein serA-like 715255 - 716178 + | phosphoglycerate dehydrogenase (serA), Nter fragment PAB1857 718059 - 716251 - | hypothetical protein PAB1856 719454 - 718114 - | hypothetical protein PAB1855 720190 - 719447 - | hypothetical protein TERM 244 719732 - 719751 + g 76 -4.2 -5.05601 | opp_overlap 719732 AGGCTCAAGTAACAG GGCCTGAA GTAA TTCGAGCC TTTTTCTCTCTCCTC PAB0517 720312 - 720728 + | hypothetical protein PAB0518 720713 - 721531 + | hypothetical protein aif5A 721954 - 721538 - | translation initiation factor IF-5A PAB1853 723367 - 722000 - | hypothetical protein PAB1852 724115 - 723417 - | ribosome biogenesis protein PAB3187 724259 - 724486 + | hypothetical protein PAB0520 724474 - 724884 + | hypothetical protein PAB0521 725094 - 725417 + | hypothetical protein rpi 725421 - 726110 + | ribose-5-phosphate isomerase A PAB0523 726111 - 727046 + | nucleolar protein PAB1851 727792 - 727043 - | hypothetical protein PAB1850 729513 - 727930 - | sodium-and chloride-dependent transporter aspC 729675 - 730844 + | aspartate aminotransferase PAB1848 731826 - 730837 - | hypothetical protein PAB2446 734013 - 731830 - | hypothetical protein PAB1845 734932 - 734015 - | hypothetical protein PAB1844 735908 - 734937 - | hypothetical protein soxB 737180 - 736032 - | sarcosine oxidase, subunit beta PAB1842 738675 - 737185 - | sarcosine oxidase, subunit alpha related (soxA), Nter fragment putP-2 740371 - 738758 - | proline permease (putP-2) TERM 245 739733 - 739753 + g 70 -9.7 -2.98823 | AGATGCTATTATCTG GGTGGCC CTATCTA GGCCACC TATCTCTACGAGCGC PAB1840 740712 - 740368 - | hypothetical protein PAB0531 740648 - 741112 + | hypothetical protein PAB0532 741701 - 743614 + | putative formate dehydrogenase upp 744281 - 743583 - | uracil phosphoribosyltransferase PAB1838 745571 - 744288 - | uracil/xanthine permease PAB0535 745641 - 746099 + | hypothetical protein thi1 746130 - 746888 + | ribulose-1,5-biphosphate synthetase PAB0537 747283 - 748290 + | pyridoxine biosynthesis protein hisH-like 748321 - 748911 + | glutamine amidotransferase subunit PdxT PAB0539 748979 - 749917 + | hypothetical protein TERM 246 750171 - 750150 - g 86 -3 -5.63645 | overlap 750153 TGAAAAGAGAAAAAA TAAGGTCA TCCTAT TGACCCCA AGGCTTGAGGAGTGG TERM 247 750168 - 750153 - g 76 -4.7 -4.8277 | overlap 750150 AAAGAGAAAAAATAA GGTCA TCCTAT TGACC CCAAGGCTTGAGGAG PAB0540 749914 - 750360 + | hypothetical protein fdhA-like 750410 - 752407 + | formate dehydrogenase alpha subunit related protein TERM 248 753753 - 753705 - g 76 -2.1 -5.28166 | opp_overlap 753708 753711 753714, overlap 753695 753706 753707 GAAAATCAAGAAAAA TTTGCTCGAGGCCTCGCTAACCC TCG GGGCCAGCGAAGCCTTGTCCTTC TTGAAGGTTGAGCTA TERM 249 753711 - 753747 + G 82 -12.9 -2.93817 | opp_overlap 753695 753707 753706 753705, overlap 753708 753714 CAAGAAAAATTTGCT CGAGGCCTCGCTAACCC TCG GGGCCAGCGAAGCCTTG TCCTTCTTGAAGGTT TERM 250 753714 - 753744 + G 82 -11 -3.61089 | opp_overlap 753707 753706 753705, overlap 753711 753708 GAAAAATTTGCTCGA GGCCTCGCTAACCC TCG GGGCCAGCGAAGCC TTGTCCTTCTTGAAG PAB0543 752404 - 754005 + | ABC transporter membrane protein PAB0545 753999 - 754988 + | ABC transporter ATP-binding protein PAB1835 756033 - 754975 - | thiamine-binding periplasmic protein precursor TERM 251 756214 - 756198 - R 74 -3.7 -5.02421 | AAAAGTAAAAATAAA TGCCT GTTGGCT AGGCA GAGGATATGTTTATG PAB1834 757509 - 756208 - | hypothetical protein TERM 252 758614 - 758629 + G 72 -5.4 -4.4078 | CGAAGAGCTTATGGG TGGACT GTGG GGTCCA TTTTGCTTAGAAGGA purP 757823 - 758836 + | 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase guaA-C 758838 - 759764 + | GMP synthase subunit B guaA-N 759774 - 760340 + | GMP synthase subunit A PAB2393 761325 - 760306 - | C4-dicarboxylate transporter, putative TERM 253 762208 - 762219 + G 83 -4.4 -5.29782 | ATGATGCTTTGATTT TAGC TACA GCTA TTTTTTATAGGTGTG PAB0550 761871 - 762341 + | hypothetical protein TERM 254 762381 - 762400 + T 79 -11.4 -2.71712 | overlap 762380 TGGATCTGCCTTCCT TCTCGCCC TGAA GGGCGAGG CTTTCAAAAGAAAAA PAB2392 763606 - 762884 - | hypothetical protein PAB1827 766026 - 763612 - | hypothetical protein TERM 255 765484 - 765507 + g 73 -7.4 -4.02856 | ATCACTAGGAATTGG GCCGGAGTAA ACGA TTTTTCCGGC TTTATCCATTATTGT TERM 256 765903 - 765869 - G 71 -8 -3.84451 | opp_overlap 765863 765869 765879, overlap 765870 765878 CTTTGGAAATCTAAA TTCAAGAAATCAACTA AAT TAGTTGTCTTCTTGAG TTGGATTCTCTCACT TERM 257 765902 - 765870 - G 74 -11.5 -2.90349 | opp_overlap 765869 765863 765879, overlap 765869 765878 TTTGGAAATCTAAAT TCAAGAAATCAACTA AAT TAGTTGTCTTCTTGA GTTGGATTCTCTCAC PAB1826 768086 - 766026 - | hypothetical protein PAB1825 769507 - 768083 - | hypothetical protein TERM 258 768462 - 768490 + g 91 -11.1 -4.2693 | opp_overlap 768469, overlap 768446 GGGAGGTTTAATATC CCATAGATTAGTG GAT CACTAGTCGATGG TTCTTTTGATAAGTT PAB1824 769950 - 769504 - | hypothetical protein PAB1823 770347 - 769919 - | hypothetical protein PAB1822 770939 - 770340 - | hypothetical protein PAB1821 771605 - 770973 - | hypothetical protein TERM 259 771025 - 771035 + gr 70 -5.4 -4.33151 | ACGCCATCATAGTCC CTGT TGT ACAG TTTTACCTTGTACTC ftsZ-3 772650 - 771553 - | cell division protein PAB1819 774735 - 772663 - | hypothetical protein PAB1818 776869 - 774785 - | hypothetical protein lhr-1 779680 - 776942 - | large helicase-related protein PAB0552 779734 - 780099 + | hypothetical protein PAB0553 780096 - 781679 + | hypothetical protein PAB1814 782259 - 781666 - | hypothetical protein rps19E 783035 - 782583 - | 30S ribosomal protein S19e PAB1812 783527 - 783039 - | hypothetical protein PAB0555 783585 - 784601 + | caax prenyl protease 1 related TERM 260 784705 - 784739 + T 73 -7.1 -3.97307 | TAACAGCATCTTCCT CCCAATGTCACGATG AAACC CCTCGTCTCATTGGG TTGTTCTTGAGTGGC aspB-like2 786049 - 784853 - | alanine aminotransferase TERM 261 785003 - 785023 + g 83 -9.7 -4.02022 | GACGTGGGCGTTGTG GAGTACGTC AAG GACGAACTC TTTGTCATCCTTCCA obg-like 786145 - 787218 + | gtp1/obg family GTP-binding protein PAB1809 787764 - 787192 - | hypothetical protein PAB1808 788294 - 787833 - | hypothetical protein gcsH4 788335 - 788769 + | glycine cleavage system protein H rps17E 788975 - 788772 - | 30S ribosomal protein S17e PAB0560 789055 - 789705 + | hypothetical protein PAB1807 790257 - 789700 - | hypothetical protein PAB1806 790958 - 790290 - | hypothetical protein TERM 262 791046 - 791034 - H 74 -6.3 -4.4017 | opp_overlap 791033 GTAACCTCCAGAAAA TCATG GAT CATGA ATTCGGTAGTCGTCA thiI-like 791043 - 791963 + | thiamine biosynthesis protein ThiI PAB1804 792358 - 791960 - | hypothetical protein PAB1803 792664 - 792365 - | hypothetical protein TERM 263 792888 - 792900 + r 90 -10.5 -4.41797 | TTGCTGTACGGGGTT CCCCC TAC GGGGG TTTTGGTGTAATTTT PAB1802 794136 - 792892 - | hypothetical protein PAB1802.1n 794709 - 794963 + | inosine-5'-monophosphate dehydrogenase-like protein III PAB0562 795123 - 795812 + | hypothetical protein PAB0563 795854 - 796435 + | type II secretion system protein, putative PAB1801 797579 - 796428 - | serine--glyoxylate aminotransferase TERM 264 797727 - 797739 + G 73 -4.1 -4.7629 | overlap 797722 CCTGGCTAAGGGGAC TACGA GTT TCGTG TTTTTAGGTTCATAC PAB0564 797632 - 798282 + | hypothetical protein TERM 265 798560 - 798538 - f 79 -4.8 -5.0916 | opp_overlap 798538 GTCCCAAGATAAAAA GCATCAGTAC AAC GTGCTCATGC TTCATACTTCACCTT rpl40e 798653 - 798808 + | 50S ribosomal protein L40e mcmA1 800524 - 798836 - | methylmalonyl-CoA mutase, subunit alpha, N-terminus PAB1799 802097 - 800820 - | amino acid transporter PAB1798 803517 - 802255 - | hypothetical protein PAB2391 804670 - 803489 - | hypothetical protein aif2A 804736 - 805563 + | translation initiation factor IF-2 subunit alpha PAB7213 805574 - 805756 + | H/ACA RNA-protein complex component Nop10p PAB0569 805753 - 806556 + | hypothetical protein panB 806613 - 807461 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase PAB1796 808264 - 807458 - | hypothetical protein PAB1795 809132 - 808245 - | MRP family nucleotide-binding protein PAB1794 809739 - 809212 - | hypothetical protein mae 812810 - 811542 - | malate oxidoreductase PAB0571 810239 - 811594 + | hypothetical protein PAB1791 813901 - 812813 - | malate dehydrogenase PAB1790 817392 - 813958 - | hypothetical protein PAB1789 818505 - 817414 - | cell division protein CDC48 TERM 266 818297 - 818308 + g 73 -4.4 -4.85433 | TTCTTCCCTTCTCTC CGTT TTCT AACG TTTTTAGCTTTCTCT TERM 267 818666 - 818652 - H 70 -3.5 -4.93877 | gap 1 TTGGACTAAATAAAA CGTGGG ATGT CCC-CG TAATGGGGGAACCAC rpl15E 818701 - 819285 + | 50S ribosomal protein L15e PAB0576 819321 - 819764 + | putative hydrogenase maturation protease mobA 820319 - 819744 - | molybdopterin-guanine dinucleotide biosynthesis protein A PAB0577 820384 - 821328 + | hypothetical protein TERM 268 821355 - 821338 - f 77 -8.5 -3.95584 | opp_overlap 821338 821337 GTTTGATTAATCAAA TTTGTGC ATAT GCACAAA ATTTAAAAGCATTAG PAB0578 821398 - 822258 + | hypothetical protein PAB0579 822264 - 823157 + | hypothetical protein PAB7217 823573 - 823286 - | hypothetical protein PAB1787 824896 - 823610 - | cytochrome-c3 hydrogenase alpha chain TERM 269 823770 - 823760 - G 72 -8.2 -3.75629 | opp_overlap 823760 CATTGCCAAGTTAAA CGCC GTT GGCG TTATTATGTCCGCGT TERM 270 823760 - 823770 + g 74 -8.2 -3.885 | opp_overlap 823760 CATTGCCAAGTTAAA CGCC GTT GGCG TTATTATGTCCGCGT PAB1786 825678 - 824893 - | cytochrome-c3 hydrogenase delta chain PAB1785 826567 - 825689 - | cytochrome-c3 hydrogenase subunit gamma TERM 271 826510 - 826528 + g 73 -11 -2.70476 | overlap 826509 CCTTGAGGACCTTAA CCCTGTGC AGT GCATAGGG ATTGTCGTTCGGCAT PAB1784 827667 - 826564 - | hydrogenase (cytochrome-c3 hydrogenase beta chain) PAB0581 827771 - 829195 + | peptidase PAB0582 829241 - 830410 + | hypothetical protein leuS 833303 - 830400 - | leucyl-tRNA synthetase TERM 272 833568 - 833547 - H 77 -5.2 -5.00616 | opp_overlap 833547 833550, overlap 833548 GTTTTGGGGAAAAAA CCAGCATT TATATT AATGCTGA CTTGTGGTGGGAACT TERM 273 833966 - 833956 - H 71 -4 -4.89852 | TTACAGCCATAAAAA TTTC TGC GAAA AATACTCATTTGAGC TERM 274 834169 - 834152 - g 76 -4.1 -5.08011 | overlap 834153 AAAACCTCTAAAAAA GCTTCCT TTTA AGGAAGG AGAAAAGCTAATTGT PAB8218 834096 - 834308 + | hypothetical protein PAB7218 834420 - 834710 + | hypothetical protein pepQ-3 835939 - 834872 - | X-pro aminopeptidase TERM 275 836722 - 836712 - R 100 -5.4 -5.74684 | overlap 836713 CAAGAAAAAGAAAAA TCCT CAG AGGA GACTCTCAATTAGCT PAB1780 837143 - 836715 - | hypothetical protein PAB1779 837580 - 837140 - | hypothetical protein PAB0588 837682 - 840714 + | hypothetical protein TERM 276 841686 - 841670 - g 71 -7.3 -4.10744 | opp_overlap 841670 TTATTCAAATAAGAA CGTCTTC GGG GAAAACG TTAAGTTCGAGGAGA TERM 277 843841 - 843827 - g 72 -4.9 -4.58424 | CATGAGGATAGAAAA GCCCC TCTGG GAGGC AAGGTTCGATGGCCT PAB0589 840711 - 844040 + | hypothetical protein PAB0590 844024 - 844485 + | hypothetical protein TERM 278 845750 - 845736 - g 74 -11.4 -2.75986 | overlap 845732 CTAAGAAAGAACCTA CCCAGC CTC GCTGGG CTTAGCGATGAAGAC PAB0591 844482 - 847403 + | putative deah atp-dependent helicase TERM 279 848946 - 848931 - g 80 -5.4 -5.05601 | overlap 848923 CAGGATAGAGAAAAA TCCCAA CCCC CTGGGA ATATTCCACATGATA PAB0592 847405 - 849552 + | ski2-like helicase TERM 280 849711 - 849695 - f 89 -9.5 -4.29929 | AGTAAAGCTAACAAA GGCTTTT ATT AAAAGCC TGCGAGAAAAAATCG TERM 281 849844 - 849834 - g 80 -6.8 -4.68705 | AGAACGTTAAGAAAA CTGC AAA GCAG ATAGCTGAAATTATC cpa 849737 - 850681 + | carbamate kinase-like carbamoyl phosphate synthetase PAB0594 851001 - 852218 + | hypothetical protein TERM 282 852420 - 852405 - T 77 -10.4 -3.36785 | opp_overlap 852407 TGACACTGGAAGGAA GACGCC GGTA GGCGTC TCTAAGTGATAATCC TERM 283 852471 - 852481 + T 70 -3.2 -4.89339 | CAAAGATTAGTTATT GGGT TTT ATCC TTTTTATAGATCCTT PAB1772 853736 - 852534 - | methylmalonyl-CoA decarboxylase, beta subunit PAB1771 854179 - 853742 - | putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit PAB1770 854535 - 854182 - | hypothetical protein mmdA 856113 - 854545 - | methylmalonyl-CoA decarboxylase, subunit alpha TERM 284 857472 - 857461 - g 79 -4.4 -5.11389 | AGAAGATAAAGAAAA GCTT AGGG AAGC CGTGAGAAGGTTAAT fprA 856274 - 857503 + | flavoprotein PAB1767 859320 - 857515 - | hypothetical protein TERM 285 859366 - 859356 - gH 71 -6.8 -4.10925 | ATAGAGGCGGCAAAA GAGG CTC CCTC TGGAATGAACGCACA PAB0597 859254 - 859817 + | hypothetical protein rr 859898 - 860425 + | rubrerythrin rd 860505 - 860666 + | rubredoxin PAB0599 860668 - 861024 + | desulfoferrodoxin PAB1765 861785 - 861039 - | menaquinone biosynthesis methlytransferase related PAB1764 862244 - 861906 - | hypothetical protein TERM 286 862412 - 862458 + H 85 -12.5 -3.11192 | gap 1 TAATTAAACCATTCT GGTTATCCGCTAC-TTTGGAAC TTGG GAATCAAATGTAGCGGATAACC TTCCATCCTCCTATC PAB0600 862714 - 863907 + | hypothetical protein ubiE 863947 - 864549 + | ubiquinone/menaquinone biosynthesis methyl transferase PAB0602 864572 - 865390 + | hypothetical protein PAB1763 865947 - 865357 - | hypothetical protein PAB0603 866049 - 866456 + | hypothetical protein PAB1761 867365 - 866700 - | hypothetical protein PAB2390 868742 - 867390 - | sun protein (fmu protein) TERM 287 868899 - 868887 - g 72 -2.7 -4.98522 | AAGGTGAGATAAAAA TGAAA CCG CTTCA CGATCCTCTCTACAT metB 868808 - 869989 + | cystathionine gamma-synthase TERM 288 870949 - 870930 - g 84 -10.8 -3.91897 | overlap 870901 GCTTGGAGGGATAAA TCTCATCG TTTT CGATGAGA ACTCCTGGGAAAAGA PAB0606 869986 - 871005 + | meth2 - like metE-like2 870998 - 871939 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase metE-like1 871941 - 872957 + | methionine synthase PAB1758 873842 - 872943 - | hypothetical protein putP-1 874041 - 875495 + | osmoregulated proline transporter hom 875552 - 876508 + | homoserine dehydrogenase ppnK 877338 - 876505 - | inorganic polyphosphate/ATP-NAD kinase PAB1755 878133 - 877789 - | hypothetical protein PAB1754 878603 - 878196 - | hypothetical protein TERM 289 878340 - 878359 + g 70 -10 -3.10474 | AATCACCTCTCGGAG CTCCTCCT CAGC GGGAGGAG TGTTAGGCTCTTGTG PAB1753 879473 - 878856 - | hypothetical protein PAB2389 880514 - 879474 - | bifunctional short chain isoprenyl diphosphate synthase (idsA) PAB1751 881866 - 880511 - | hypothetical protein PAB0614 881949 - 882845 + | hypothetical protein TERM 290 883234 - 883219 - g 70 -4.7 -4.40804 | opp_overlap 883219 883227 GAGGACGGGATAAAA CTCCT TAACCT AGGAG TCTCCTGCGGGTTTA PAB0615 882871 - 883455 + | hypothetical protein PAB1750 883979 - 883452 - | hypothetical protein ileS 884230 - 887433 + | isoleucyl-tRNA synthetase PAB1748 888238 - 887462 - | hypothetical protein TERM 291 887876 - 887864 - G 70 -9.1 -3.35992 | AGCCAGGCCAACGAA CGCCA TGA TGGCG AAGAAAACATCGTGA TERM 292 888125 - 888110 - G 76 -4.6 -5.09221 | opp_overlap 888112, overlap 888112 GAGAACAAAAAGAAA GGCCGT AATG AGGGCC CATTCACGGGTTATG PAB1747 889065 - 888256 - | hypothetical protein PAB1746 889830 - 889084 - | hypothetical protein PAB0618 889948 - 890454 + | hypothetical protein TERM 293 890517 - 890548 + G 77 -8.8 -3.87869 | opp_overlap 890518, overlap 890518 GTGAGGCTTGGCATA ATGGTTTTTCTCCT TTCC AGGAGAAAGGCCAC TTTCTCCCAAATTCA TERM 294 890518 - 890547 + G 79 -12.3 -2.924 | opp_overlap 890518, overlap 890517 TGAGGCTTGGCATAA TGGTTTTTCTCCT TTCC AGGAGAAAGGCCA CTTTCTCCCAAATTC PAB0619 890454 - 890756 + | hypothetical protein PAB0620 890795 - 891142 + | hypothetical protein TERM 295 891315 - 891299 - g 72 -8.7 -3.79906 | opp_overlap 891299 891298 CGAGCGTCACAATAA CTCCTGG GCC CCAGAAG ATTAATTCTGAAGAA PAB0621 891196 - 892092 + | hypothetical protein TERM 296 892133 - 892145 + F 70 -7.7 -3.6968 | opp_overlap 892133 892132 AATATCATGGCAAAC CTTCC AGT GGAAG TTGTTAAGATTCTGG PAB0622 892306 - 892620 + | hypothetical protein TERM 297 892770 - 892756 - f 70 -5.7 -4.41633 | TACCCTTAAAAATAA CCTTC AGGGG GAAGG ACAGAGACGTGATAG PAB0623 892992 - 893414 + | hypothetical protein PAB0624 893490 - 893966 + | hypothetical protein PAB1744 894627 - 893947 - | virr related protein TERM 298 894856 - 894898 + H 84 -6.9 -4.91109 | gap 2, opp_overlap 894880, overlap 894858 CTGCTAAGCCGGTGG GCGTGGT-CC-CGCCGGGGTT CAA ATCCCCGCCGCGGCGCCACAC TTTTTGTGATGCCGG PAB0625 895182 - 895538 + | transcriptional repressor smtb - like pacS 895535 - 897604 + | cation-transporting ATPase, P-type PAB1741 898076 - 897606 - | hypothetical protein TERM 299 897995 - 898008 + g 73 -2.4 -5.10163 | CTGCAAGGATAAACT CAAG AATCTC CTTG TTTTGTTTTCGAGTT PAB1740 899836 - 898274 - | Beta-mannosidase TERM 300 900023 - 900008 - g 75 -2.6 -5.18357 | gap 1, opp_overlap 900008 900015 CAACGCATGAAAAAA CTAGTGG CAG CCA-TAG TTGTTGGGTTGTTCA appA 899975 - 901909 + | oligopeptide-binding protein appa precursor appB-2 901948 - 902952 + | oligopeptide transport system permease protein appb appC-2 902953 - 903873 + | oligopeptide transport integral membrane protein appF-2 903875 - 904843 + | oligopeptide transport atp-binding protein appf appF-3 904843 - 905811 + | oligopeptide transport atp-binding protein appf celB-like 905815 - 907359 + | endoglucanase PAB0633 907450 - 908760 + | hypothetical protein TERM 301 909998 - 910013 + G 73 -7.6 -4.08692 | CTCGATGAGCTATAC GCTCTT GAGA AAGAGC TTTTCGAGAAGGTTG PAB0634 909188 - 910207 + | hypothetical protein PAB0635 910565 - 911041 + | hypothetical protein PAB1738 912468 - 911044 - | putative oxidoreductase PAB1737 913305 - 912469 - | ferredoxin--NADP(+) reductase subunit alpha hydB-2 913454 - 914458 + | hydrogenase (cytochrome-c3 hydrogenase beta chain) hydG-2 914455 - 915321 + | cytochrome-c3 hydrogenase subunit gamma hydD-2 915321 - 916046 + | hydrogenase (cytochrome-c3 hydrogenase delta chain) TERM 302 916289 - 916279 - g 71 -6.8 -4.18494 | TAGGGCGATTGAAAA TGCC CTA GGCA TTGAAGTTTCTGAGA hydA-2 916040 - 917287 + | cytochrome-c3 hydrogenase alpha chain PAB1736 918115 - 917258 - | hypothetical protein PAB2388 919038 - 918115 - | dipeptidase PAB0642 919143 - 919865 + | recombinase related PAB0643 919849 - 920268 + | hypothetical protein PAB0644 920268 - 922061 + | hypothetical protein TERM 303 922575 - 922557 - g 77 -11.8 -2.87522 | CCAATCTACAGTATA TTCTCGAG GCC CTCGAGAA GGTTAAGGAGATAGA TERM 304 923592 - 923610 + G 75 -11 -2.99319 | overlap 923594 CCCCAGACAGATGCC CACTCGGG TTG CCTGAGTG TATATATAAGAAGTT PAB0645 922448 - 923689 + | sugar-phosphate nucleotydyl transferase aspC 923751 - 925067 + | aspartyl-tRNA synthetase TERM 305 926870 - 926855 - g 73 -10.4 -3.09505 | ACACGTTACCCAAGA GGCTCC TCGA GGAGCC GATGCCAGAAGGACC aor-2 925189 - 927012 + | tungsten-containing aldehyde ferredoxin oxidoreductase moaD-like 927046 - 927300 + | molybdopterin converting factor related, subunit 1 TERM 306 927766 - 927756 - g 93 -6.8 -5.64304 | GAACAGAATAAAAAA GCTC GTG GAGC TCAAGGAGAAGTATG cmo 927301 - 928422 + | tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein PAB0649 928419 - 928730 + | hypothetical protein PAB1730 929552 - 928713 - | hypothetical protein PAB0651 929615 - 930160 + | aromatic acid decarboxylase TERM 307 930443 - 930453 + G 72 -3.2 -4.99043 | CAAGACATTATCAGG CTTC TCG GAGG TTTTATTTGTAGCCA PAB0652 930153 - 930641 + | AsnC family transcriptional regulator cyaB-like1 930645 - 931157 + | adenylyl cyclase, CyaB-type, putative tyrS 932256 - 931129 - | tyrosyl-tRNA synthetase PAB1727 932843 - 932262 - | hypothetical protein PAB0654 932927 - 933343 + | hypothetical protein PAB1726 933919 - 933344 - | transcription factor PAB1725 934570 - 933980 - | hypothetical protein proS 936009 - 934567 - | prolyl-tRNA synthetase TERM 308 934785 - 934796 + g 70 -2.2 -4.99638 | TCTTGGCTTCCTCAA GGGT TTCC ACTC TTTTTATGTGACTGT PAB0655 936089 - 937384 + | hypothetical protein PAB1723 938108 - 937350 - | hypothetical protein PAB1722 940778 - 938160 - | DNA helicases PAB1721 941701 - 940775 - | hypothetical protein TERM 309 941067 - 941083 + g 70 -10.1 -3.07962 | opp_overlap 941067 CTATAAGACAGGTAA GTCGGAG GGC CTCCGGC TATTAGGATGTCAGG TERM 310 941212 - 941253 + g 73 -9.5 -3.45054 | gap 1, opp_overlap 941250 CAACGTAGCCGAGCT TTGAGCCTTC-CCTCCCATG GGG CACGGGAGGCGAAAACTCAA TTATGAATTCTCCAA PAB0657 941903 - 942346 + | hit-like protein PAB0658 942333 - 943322 + | hypothetical protein PAB1720 943845 - 943303 - | pyrazinamidase/nicotinamidase TERM 311 943609 - 943621 + g 72 -5.5 -4.37886 | ATCGACTACAAATTC TGCCC CAG GGGTA TTTTGTACACAGTGC PAB1719 945002 - 943881 - | hypothetical protein TERM 312 944083 - 944106 + g 73 -7.5 -4.15788 | opp_overlap 944074 944083 CTAAAACTTTCAAAA GCTTGATAG TAAAGT CTGTCAAGC TTTCTTCCAAGGGTT PAB0660 945119 - 946105 + | hypothetical protein PAB0661 946107 - 946964 + | hypothetical protein TERM 313 948212 - 948230 + G 72 -10.4 -2.78266 | opp_overlap 948212 948216, overlap 948207 948216 ATTTCAAGGTGAGAA TTAACGAG GAA CTCGTTAA TAATCTTGGTAACTT TERM 314 948230 - 948212 - g 77 -10.4 -3.36671 | opp_overlap 948207 948212 948216, overlap 948216 ATTTCAAGGTGAGAA TTAACGAG GAA CTCGTTAA TAATCTTGGTAACTT metG 947038 - 949206 + | methionyl-tRNA synthetase PAB1717 949564 - 949259 - | periplasmic divalent cation tolerance protein PAB1716 950732 - 949581 - | hypothetical protein PAB1715 951047 - 950739 - | hypothetical protein PAB1714 952075 - 951080 - | hypothetical protein TERM 315 951616 - 951596 - G 71 -9.7 -3.14132 | opp_overlap 951584 951583, overlap 951600 TTCCTCGGGTAGGAA TTTACCGGC TTT GCCGGTTAA GATGGCGTACCCGAG TERM 316 951612 - 951600 - G 70 -10.5 -2.56596 | opp_overlap 951584 951583, overlap 951596 TCGGGTAGGAATTTA CCGGC TTT GCCGG TTAAGATGGCGTACC PAB1713 952743 - 952066 - | hypothetical protein PAB2445 953517 - 952750 - | hypothetical protein TERM 317 953563 - 953597 + H 75 -9.4 -3.27902 | opp_overlap 953559 953554 953563 953567, overlap 953567 953578 953580 CATAAACATATTTAA GTAATGGTACCATTAC TTA GTAATGGGGGCATTAC TATGTTGTTCGATCC PAB0664 953599 - 954684 + | hypothetical protein TERM 318 954803 - 954779 - g 86 -11.5 -3.67775 | ACTTGGACTTAAGAA CGTTGATGCAA CGC TTGCAACAACG ATTAGGGCCGTTATA PAB0665 954696 - 955109 + | hypothetical protein PAB1709 956735 - 955380 - | hypothetical protein PAB1708 957350 - 956760 - | hypothetical protein PAB1707 958734 - 957394 - | hydroxylamine reductase TERM 319 958759 - 958788 + H 70 -3.5 -4.87273 | overlap 958766 AACTACCACACCTTT CACCTCCTATGAC ACTT GTCATATTCGGTG TTTTTATGAAATATT PAB0668 958900 - 959292 + | hypothetical protein PAB1706 959990 - 959289 - | hypothetical protein PAB1705 960841 - 960365 - | hypothetical protein TERM 320 960917 - 960894 - R 71 -6.1 -4.26076 | opp_overlap 960885 960899, overlap 960899 CCAGTTGCAGTAAAA GAAAAGTAG GGAGGA CTACTTCTC TAATGCTGCTTTAAA PAB1704 961703 - 960909 - | membrane protein TERM 321 961399 - 961385 - G 74 -5.6 -4.71426 | overlap 961387 TCGCCATGAACAAAA CCGTGC GAG GCACTG GAAGTGTAAACAGTG PAB1703 962644 - 961700 - | daunorubicin resistance atp-binding protein drra TERM 322 961864 - 961874 + g 82 -6.8 -4.74706 | opp_overlap 961834 961832 CTCTAGCAAGACGCA CGTC TTT GACG TTTTTAACTCTTAGG PAB1702 963991 - 962666 - | heme biosynthesis protein related TERM 323 963253 - 963265 + g 83 -4.1 -5.31545 | TTTGAGGTTTCCATC CTAGT TCT GCTAG TTTTTTAATATTATT TERM 324 963884 - 963906 + g 72 -8.4 -3.6944 | TAAGAGTTGAGGATT TGGGAGGAAC AAT GTACCTTCCA TCTTTATCTTACCCC truA 965254 - 964463 - | tRNA pseudouridine synthase A PAB0672 965302 - 965805 + | hypothetical protein PAB0673 965815 - 966204 + | hypothetical protein TERM 325 966196 - 966217 + F 95 -11.7 -4.48987 | opp_overlap 966212 966214 AAGGAGAGGAGGCTT GTTCTCTAG AGAA CTAGAGAAC TTTTGGTTCTCAACC PAB0674 966287 - 967000 + | hypothetical protein PAB0675 967081 - 967776 + | molybdenum formylmethanofuran dehydrogenas e subunit fmde related hemv-3 967773 - 968873 + | iron (III) ABC transporter, atp-binding protein (hemv-3) TERM 326 969803 - 969813 + G 74 -5.4 -4.58663 | ACTGCTGATACTTTT GCTA GGT TAGC TTTTTCGCCGATGAT TERM 327 969856 - 969871 + G 76 -4.6 -4.91459 | overlap 969858 AGTTGTTACATCCTT CCTGGG GGCT CCCATG TTTTTGTACCTATTG hemU-1 968879 - 969910 + | iron (III) ABC transporter, permease protein hemV-1 969907 - 970680 + | iron (III) ABC transporter, atp-binding protein PAB1699 971514 - 970672 - | hypothetical protein TERM 328 971004 - 971014 + g 78 -5.4 -4.91109 | TAACGTACTCTCCTA GTTC CCT GAAC TTTTTCTCGTCGAAG PAB1698 971819 - 971511 - | hypothetical protein PAB1697 973272 - 971821 - | hypothetical protein TERM 329 972481 - 972493 + g 76 -7.7 -4.32177 | CTTCTCCCCTTCAAG GCTCT CCC AGAGC TTTCTTATACCGTAC PAB1696 974033 - 973272 - | ABC transporter, ATP-binding protein PAB1695 974779 - 974060 - | N-glycosylase/DNA lyase PAB1694 975744 - 974776 - | hypothetical protein TERM 330 974876 - 974906 + g 71 -6.9 -4.09739 | overlap 974881 ACTTCGGCCTTTATT CCGTAGTCGTTGA GCGAG TCAATGACTTTGG TTTTGACGAGGTTGA TERM 331 974881 - 974901 + g 72 -6.2 -4.19735 | overlap 974876 GGCCTTTATTCCGTA GTCGTTGA GCGAG TCAATGAC TTTGGTTTTGACGAG PAB1693 977411 - 975936 - | hypothetical protein PAB1692 978562 - 977978 - | hypothetical protein PAB1691 979396 - 978707 - | hypothetical protein TERM 332 979255 - 979279 + gr 79 -2.7 -5.33785 | overlap 979243 TATCTTTGATCGCAC GAAGAGCGTTC ACA GTTCTCTCTTC TTTTTTGTAATCATT PAB1690 980036 - 979368 - | hypothetical protein PAB1689 981622 - 980033 - | atp-dependent rna helicase related protein PAB1688 982800 - 981619 - | hypothetical protein PAB1687 983567 - 982797 - | hypothetical protein PAB1686 984486 - 983536 - | hypothetical protein PAB1685 984864 - 984487 - | hypothetical protein TERM 333 985457 - 985445 - g 82 -6.9 -4.81212 | overlap 985453 TTCAGGAGAAGAAAA GGGAG AAG CCCCC ACTTGAAGGTGAGTA PAB0685 985063 - 985473 + | hypothetical protein TERM 334 985746 - 985759 + G 73 -2.4 -5.10933 | GGATAGCGACAAACG GAAC TTTTTT GTTC TTTTGTTTTCCATAA PAB0686 985477 - 985815 + | hypothetical protein PAB0687 986198 - 987358 + | hypothetical protein PAB1684 987962 - 987327 - | hypothetical protein PAB0689 987996 - 989741 + | hypothetical protein PAB0690 989851 - 991443 + | hypothetical protein PAB0691 991541 - 991948 + | hypothetical protein PAB2433 993229 - 991955 - | glucose-1-phosphate thymidylyltransferase related protein pgk 994458 - 993226 - | phosphoglycerate kinase TERM 335 993417 - 993397 - G 70 -9.7 -3.04398 | overlap 993396 GCCCCCGCCTAAAAC GCTGAATGC TTC GCTTTCAGC TATCGCCTTAAACAC asd 995512 - 994505 - | aspartate-semialdehyde dehydrogenase thrC-2 996693 - 995509 - | threonine synthase PAB1676 997568 - 996684 - | homoserine kinase lysC 998571 - 997513 - | aspartate kinase TERM 336 998297 - 998324 + gr 72 -8.5 -3.61209 | overlap 998296 ATCTCATCTCTTAAT GCTTCAGGAGG CATATC TTTCCTGAAGC TTATGCTTATCTTGG PAB1674 999718 - 998612 - | aspartate kinase PAB1673 1000590 - 999940 - | peroxiredoxin TERM 337 1000228 - 1000254 + g 70 -9.5 -2.94466 | overlap 1000224 1000249 AACGATGAAGACTGC CCTAGCGGT TATCGTAGC ACCGCTAGG TATCATTCCTAGCTT phoX 1000765 - 1001916 + | phosphate ABC transporter, periplasmic phosphate-binding protein phoA 1001913 - 1003400 + | alkaline phosphatase IV precursor PAB0696 1003412 - 1004212 + | hypothetical protein PAB0697 1004209 - 1004964 + | hypothetical protein pstC 1004961 - 1005875 + | phosphate ABC transporter, permease protein TERM 338 1005911 - 1005898 - gf 76 -2.3 -5.38326 | GTAATTAAAGAAAAA GCATC CATC GTTGC AGTCTTCACCTTGAC TERM 339 1006197 - 1006215 + GF 70 -9.6 -2.50016 | opp_overlap 1006187, overlap 1006196 1006194 GATTATGATGGAGTT CCCAACGA TAC TTGTTGGG GTCTTCGTCATGGGA pstA 1005862 - 1006695 + | phosphate ABC transporter, permease protein pstB 1006611 - 1007453 + | phosphate ABC transporter, ATP-binding protein PAB0701 1007450 - 1008001 + | hypothetical protein phoU 1008006 - 1008602 + | phosphate ABC transporter, regulatory protein PAB1672 1009665 - 1009234 - | hypothetical protein TERM 340 1009457 - 1009467 + gT 72 -5.4 -4.41047 | AATTTTATAGCAGTT GTGA GAC TCAC TTTTGCTTCAAGAAT PAB1672.1n 1009900 - 1009634 - | hypothetical protein PAB1671 1011003 - 1010041 - | hypothetical protein TERM 341 1010937 - 1010925 - G 73 -7.7 -4.16943 | TCGCATAGCTTAAAA TCTCC TTA GGAGA TAAGTCTTTTAGTTT PAB1670 1011828 - 1011490 - | hypothetical protein TERM 342 1011853 - 1011836 - R 74 -6.3 -4.34711 | overlap 1011844 AAAACCAACGCAAAA TCTGGAA ACCC CTCCAGA GGCCTTTAATCCCTG PAB1669 1012283 - 1011813 - | hypothetical protein PAB1668 1013217 - 1012270 - | atp-binding transport protein PAB0703 1013300 - 1013968 + | hydroxyacylglutathione hydrolase related (glyoxalase II) PAB3259 1013965 - 1014216 + | hypothetical protein PAB0704 1014176 - 1014703 + | thermonuclease precursor PAB0705 1014688 - 1015272 + | hypothetical protein PAB1666 1016596 - 1015241 - | phospho-sugar mutase PAB1665 1017377 - 1016598 - | hypothetical protein PAB0707 1017424 - 1018185 + | hypothetical protein TERM 343 1018180 - 1018194 + F 72 -4.3 -4.74504 | overlap 1018176 TTCGGGCTCCCTTTG GTTTG AAAAC CAAAC TTTTTACGTTAAAAT TERM 344 1018259 - 1018246 - f 79 -5.3 -5.03314 | GGTATTCTGAAAAAA TTAGG TTGG CCTAA TAAAATGGGAGGGCC PAB3260 1018280 - 1018516 + | hypothetical protein feoB 1018518 - 1020503 + | ferrous iron transport protein b - like TERM 345 1020547 - 1020536 - T 76 -4.4 -5.15634 | GAGTTGATGAAAAAA GGAT CAGT ATCC ATAGAGGAACTCGCC PAB1663 1021394 - 1020723 - | hypothetical protein PAB1662 1022510 - 1021398 - | isopentenyl pyrophosphate isomerase PAB1661 1023370 - 1022597 - | hypothetical protein TERM 346 1022651 - 1022663 + g 74 -5.5 -4.62336 | ATTTTCAAGCCATTG CTCTG GTA CAGGG TTTTTAGGCTCAAGT PAB0711 1024153 - 1025031 + | hypothetical protein PAB0712 1025006 - 1026082 + | hypothetical protein PAB0713 1026105 - 1027220 + | hypothetical protein PAB1660 1029005 - 1027692 - | hypothetical protein PAB0714 1027263 - 1027754 + | iron-dependent repressor PAB1659 1029892 - 1029095 - | 5'-methylthioadenosine phosphorylase TERM 347 1029987 - 1029970 - R 72 -8.3 -3.55447 | TTAGCCAGGATAGAA CGCCGCC CTCC GGAGGCG GAGGTCCCGGGTTCA PAB1658 1031431 - 1030019 - | transmembrane transport protein PAB1657 1032858 - 1031428 - | exoenzyme regulatory protein aepa precursor TERM 348 1032215 - 1032225 + g 71 -6.8 -4.05714 | opp_overlap 1032214 TCTAAGTAGAACAGG GCCT TAA AGGC TTTCTCGTTGACGCT iorA-2 1032926 - 1034767 + | indolepyruvate ferredoxin oxidoreductase, subunit alpha PAB0719 1034814 - 1036031 + | putative RNA methyltransferase PAB1655 1036406 - 1036023 - | initiation factor EIf-2b alpha subunit 1 PAB0720 1036469 - 1036879 + | hypothetical protein PAB0721 1036876 - 1037811 + | methlytransferase TERM 349 1038802 - 1038792 - g 74 -6.8 -4.26076 | opp_overlap 1038798 GGATGTTCAGGAAAA GGAG TTA CTCC TGAGGGAGCTCTTGG hflX-like 1037836 - 1039107 + | GTP-binding protein hflx PAB1652 1040060 - 1039104 - | sodium-dependent phosphate transporter TERM 350 1039872 - 1039884 + g 70 -4.8 -4.4009 | TATCCCCCTTCCAAC GGTC TCCAT GACC TTTTCTCCCCTAAGA PAB1651 1040922 - 1040371 - | hypothetical protein PAB1650 1041338 - 1040955 - | hypothetical protein TERM 351 1041096 - 1041108 + g 93 -9.1 -4.74103 | CTTCATTATCCCGAA GGCCA TCA TGGCC TTTTTCCCTTCAACC PAB1649 1041957 - 1041610 - | hypothetical protein TERM 352 1042951 - 1042935 - g 79 -10.9 -3.32294 | opp_overlap 1042934 1042933, overlap 1042926 TGAAATGCTCCAGAA GCTCAAG GAA CTTGAGC CGTTTAAGGTGAAGG argE-like 1042357 - 1043421 + | acetylornithine deacetylase TERM 353 1043714 - 1043727 + GT 73 -6.7 -4.14257 | opp_overlap 1043714, overlap 1043713 1043714 GTTTCGATTTAATAA GAGGA GTCC TCCTC TTTCTGGTTATTGCA thiD 1046022 - 1044682 - | phosphomethylpyrimidine kinase PAB0724 1043482 - 1044738 + | multidrug ABC transporter thiE 1046642 - 1046019 - | thiamine-phosphate pyrophosphorylase thiM 1047438 - 1046632 - | hydroxyethylthiazole kinase PAB1643 1048679 - 1047435 - | purine-cytosine permease related PAB1642 1049316 - 1048642 - | transcriptional regulator PAB1641 1049944 - 1049300 - | hypothetical protein TERM 354 1049483 - 1049503 + g 95 -11.1 -4.41609 | CCATTCCCTGTATAT CTCGACGGG ATT CCCATCGAG TTTATCTTTATGATA PAB1640 1050675 - 1050016 - | hypothetical protein PAB1639 1051316 - 1050669 - | hypothetical protein gcvT 1052577 - 1051381 - | glycine cleavage system aminomethyltransferase T PAB0726 1052696 - 1053244 + | hypothetical protein pepQ-2 1054292 - 1053237 - | cobalt-dependent proline dipeptidase TERM 355 1054674 - 1054655 - g 72 -5 -4.69512 | AAAATAGAAAAAGAA GTCAACGT TGAA ACGTTCAC AACTAGTACAGCAGT PAB2420 1054367 - 1055077 + | arylmalonate decarboxylase PAB0728 1055079 - 1056002 + | ribonuclease Z TERM 356 1056321 - 1056331 + GT 72 -5.4 -4.4715 | opp_overlap 1056321 ACCAATTCGAGTAAC GCTT AGG AAGC TTTTATCCATTCCAC traB 1055971 - 1056648 + | pheromone shutdown protein (traB) PAB1635 1057302 - 1056979 - | hypothetical protein pyrE 1057822 - 1057274 - | orotate phosphoribosyltransferase TERM 357 1058013 - 1058003 - g 82 -5.4 -5.10004 | AAAAACAAGGAAAAA GCTT CGC AAGC ATCCAAGGAGGAGGG rpl21E 1057959 - 1058252 + | 50S ribosomal protein L21e PAB0732 1058259 - 1058624 + | hypothetical protein PAB0733 1058593 - 1058934 + | hypothetical protein PAB1634 1059546 - 1058923 - | hypothetical protein PAB0735 1059607 - 1060365 + | geranylgeranylglyceryl phosphate synthase-like protein PAB1633 1062183 - 1060357 - | ATPase PAB0736 1062256 - 1062849 + | hypothetical protein PAB0737 1062919 - 1064118 + | hypothetical protein PAB1632 1064566 - 1064099 - | hypothetical protein TERM 358 1064196 - 1064206 + g 74 -5.4 -4.55625 | overlap 1064205 AGTTTAGTATCGTTT TCGA CTA TCGA TTTTATAATCTTAGT PAB1631 1065014 - 1064568 - | hypothetical protein TERM 359 1065212 - 1065195 - g 73 -4.1 -4.87133 | gap 1 AGGGCGGAAATAAAA GCC-AGGA CAC CCCTCGGC ATTGAAATGGAGAGG adk 1065075 - 1065737 + | adenylate kinase tgtA 1065780 - 1067534 + | 7-cyano-7-deazaguanine tRNA-ribosyltransferase TERM 360 1067712 - 1067729 + F 82 -8.5 -4.30987 | GTTTTCGTTTTCTGT TTACCAC AACA GTGGTAA TTTCTTGTCAAACAT PAB0741 1067888 - 1068202 + | hypothetical protein PAB7281 1068276 - 1068575 + | hypothetical protein PAB2429 1069686 - 1068577 - | phosphonoacetate hydrolase related TERM 361 1069628 - 1069601 - G 74 -10.6 -3.20616 | opp_overlap 1069597 ACGATGAACATCGAA CCTTCCTCAGCG AGCT CGCTCAGGAAAG GCATGTGCTTTAAGT TERM 362 1070114 - 1070137 + G 72 -8.9 -3.54149 | overlap 1070105 1070117 TTTTCTCCATTACGG GGAGGAACC CGAGTT GGTTCCTTC TTATACTGTGTTCTT pflX 1069782 - 1070789 + | pyruvate formate-lyase activating enzyme PAB0743 1070792 - 1071145 + | hypothetical protein TERM 363 1073300 - 1073313 + G 79 -8.1 -4.32903 | opp_overlap 1073289 1073299 AGAAGGGCAAACGAT GCCCT GAGT AGGGC TTTTGCATATTTAAT lhr-2 1071284 - 1073887 + | ATP-dependent helicase PAB1625 1074499 - 1073870 - | hypothetical protein TERM 364 1074512 - 1074570 + r 83 -11 -3.73336 | opp_overlap 1074508 CACCTAAATTAGAGG TGTCCCCTCCCCGACCGC-CCTCCGG TCACTGATC CCGGAGGTGTGAGAGGGGAGGGG-CA TTATTACCTTGAGAT PAB1624 1075039 - 1074593 - | hypothetical protein PAB1623 1075498 - 1075049 - | hypothetical protein TERM 365 1075308 - 1075323 + g 93 -9 -4.87893 | overlap 1075316 CCAACGTACTTGCAA TCCTCC GAGA GGAGGA TTTTTCCTTCGCATT PAB1622 1076399 - 1075482 - | hypothetical protein PAB1621 1077035 - 1076625 - | hypothetical protein TERM 366 1076693 - 1076751 + gH 100 -17.7 -3.05343 | gap 1, opp_overlap 1076687 1076714, overlap 1076686 1076696 1076705 1076714 GCTTATAAACGGTTA CACCGCATTTAGCTCGGACAAGGCACTC TTCT GAGTGTCTTGTCCAAGCTGGATG-GATG TGTTGGAAATGTACG TERM 367 1076696 - 1076749 + gH 100 -14.7 -3.08371 | opp_overlap 1076687 1076714, overlap 1076686 1076693 1076705 1076714 TATAAACGGTTACAC CGCATTTAGCTCGGACAAGGCACTC TTCT GAGTGTCTTGTCCAAGCTGGATGGA TGTGTTGGAAATGTA PAB1622a.1n 1076727 - 1077002 + | hypothetical protein TERM 368 1077802 - 1077789 - gfH 75 -8.1 -4.00882 | GAAGAGAATATTAAA GCTCC TAAG GGAGC ATGGAAGGAGGGCAA PAB0746 1077034 - 1078053 + | putative diphthamide synthesis protein PAB0747 1078019 - 1078447 + | hypothetical protein PAB1620 1079164 - 1078433 - | hypothetical protein PAB1619 1079753 - 1079130 - | hypothetical protein TERM 369 1079384 - 1079371 - GH 72 -5.3 -4.58308 | GAGTAATCAAAGAAA CTTCT CTTG AGAAG CCCCATAGAGGAAGC rps8E 1080231 - 1080614 + | 30S ribosomal protein S8e PAB1618 1083278 - 1082112 - | hypothetical protein asnB 1080728 - 1082167 + | asparagine synthetase, putative TERM 370 1082444 - 1082472 + gF 79 -6.7 -4.58395 | opp_overlap 1082432 1082440 1082458 CAAGAGCAAAACTCC TGCTCTCCTCAAG AGC CTTTAAGAGGGCA TTTTTAACGGCTACA TERM 371 1083317 - 1083265 - Gf 100 -13.1 -5.00616 | opp_overlap 1083273 CTTGTGCTGAAAAAA TTTTTACATGCCATGTAAATTACAC CAT ATGTAAATTACATGCCATGTAATAA AAAACCTTCTGTAAG PAB0751 1083384 - 1083827 + | hypothetical protein PAB0752 1083811 - 1085112 + | hypothetical protein PAB0753 1085122 - 1085760 + | hypothetical protein PAB0754 1085798 - 1086994 + | macrolide-efflux determinant related TERM 372 1087137 - 1087147 + G 72 -5.4 -4.42788 | GAGAAGGTTGTAGTT CCAA GCG TTGG TTTTGTAACATTAAA TERM 373 1088973 - 1088960 - g 70 -9.5 -3.09505 | AGAGGTTAGGGAAGA GCCCG GACT CGGGC ATACGATAGATGTGA infB 1087047 - 1090025 + | translation initiation factor IF-2 TERM 374 1090013 - 1090032 + T 89 -5.7 -5.45652 | opp_overlap 1090004 1090005 GGAAGACCCCTTCTG GAGGGCA ATTTGA TGCCTTC TTTTTTATTACAAAT PAB1613 1091250 - 1090462 - | hypothetical protein PAB1612 1092911 - 1091307 - | carbamoyl transferase related protein TERM 375 1092993 - 1093003 + H 73 -6.8 -4.24963 | overlap 1092979 TGGCCTCCTCCCTTA GGAG TAG CTCC TTTTCCCTCCTTATA TERM 376 1093087 - 1093105 + H 100 -14.6 -3.14132 | opp_overlap 1093089, overlap 1093076 CCTCGCCTCCTCAAG GAGGAGGG CTT CCCTCCTC TTCCTCACAACGGCC TERM 377 1093103 - 1093089 - H 79 -11.4 -2.70932 | opp_overlap 1093076 1093087 TCGCCTCCTCAAGGA GGAGGG CTT CCCTCC TCTTCCTCACAACGG PAB0757 1093282 - 1093824 + | putative kinase TERM 378 1094256 - 1094244 - g 79 -9.1 -4.16301 | AAGCCATATAAAGAA CAGGG ACA CCCTG ATCCAAACCCTCGCC htpX 1093825 - 1094694 + | heat shock protein HtpX TERM 379 1095532 - 1095565 + G 88 -12.5 -3.61398 | CATAGCTGGAGAGGG TGGCGAATTCGAGAC CTTC GTCTTGGATGCGCCA TTCTTCAGGAGAAGG PAB0759 1094984 - 1095664 + | hypothetical protein PAB0760 1095661 - 1096893 + | putative RNA methyltransferase TERM 380 1097285 - 1097275 - g 81 -8.2 -4.46112 | CTTCAGGGAAAGAAA GGGC TCG GCCC TAGGGTTCTTCATGG PAB0761 1096898 - 1098016 + | transport protein, permease PAB0762 1098041 - 1099885 + | prolyl endopeptidase PAB1609 1100161 - 1099859 - | hypothetical protein TERM 381 1100422 - 1100406 - g 72 -6.5 -4.22375 | overlap 1100408 ACCTAAGACAAAGAA GAGGCCT GAG AGGCCTT ACCCACACCTATGCC TERM 382 1100420 - 1100408 - g 76 -9.1 -3.70022 | overlap 1100406 CTAAGACAAAGAAGA GGCCT GAG AGGCC TTACCCACACCTATG rpl34e 1100212 - 1100496 + | 50S ribosomal protein L34e cmk 1100500 - 1101045 + | cytidylate kinase rpl14E 1101124 - 1101372 + | 50S ribosomal protein L14e PAB0764 1101420 - 1102424 + | histone deacetylase related TERM 383 1102832 - 1102820 - g 72 -9.1 -3.58365 | GAGGATAGGATATAA TGGGC CTT GCCCA CCGAGGGGTCACGGG PAB0765 1102431 - 1102991 + | hypothetical protein TERM 384 1102984 - 1102997 + F 76 -3.1 -5.30199 | opp_overlap 1102984, overlap 1102984 TTGGTTTGTACGAGA GGAAG TGAC TTTCC TTTTTATTAATTTTT TERM 385 1104842 - 1104869 + G 93 -9.2 -4.86621 | opp_overlap 1104833 1104841 AAAGTACGAGGCAAT TGCCCGAGTTAT CGAG AGAACTTGGGCA TTTTTCGTTGGCGGT PAB0766 1104396 - 1105631 + | polysaccharide biosynthesis protein, putative PAB1606 1107578 - 1106424 - | hypothetical protein PAB1605 1109474 - 1107639 - | putative asparagine synthetase, glutamine-hydrolyzing PAB1604 1110630 - 1109497 - | LPS biosynthesis rfbu related protein TERM 386 1110183 - 1110194 + g 76 -4.4 -5.08601 | CAAATAGTATCTCAG TCCT TCGG AGGA TTTTTCTTAGGATAG TERM 387 1110204 - 1110214 + g 80 -5.4 -5.01823 | GGAGGATTTTTCTTA GGAT AGT ATCC TTTTCTTGTTCTTCT TERM 388 1111627 - 1111604 - g 70 -2.4 -5.03145 | GAACTCCTGAAAAAA CACGTCCC AAACCTAA AGGACATG AAAGTTGGCGTCCTA TERM 389 1111724 - 1111709 - g 82 -5.4 -5.14965 | ATTGTGATTAAAAAA CTCCTC GAAG AAGGAG CAAAAGTAATTGCTT ugd 1110686 - 1111969 + | UDP-glucose dehydrogenase TERM 390 1112436 - 1112418 - g 83 -2.3 -5.72622 | TGCAGAAAGAAAAAA CACTCCA GTTAT CGGTGTG GAGAGTGTTCCAAGG PAB0771 1111966 - 1112841 + | alpha-d-glucosyl-1-phosphate uridylyltransferase PAB0772 1112834 - 1113730 + | glycosyl transferase PAB0773 1113809 - 1114426 + | putative acetyltransferase aspB-like1 1114429 - 1115529 + | aspartate aminotransferase PAB0775 1115526 - 1116473 + | NADH-dependent dehydrogenase - like PAB0776 1116474 - 1117820 + | udp-n-acetyl-d-mannosaminuronic acid dehydrogenase PAB0777 1119299 - 1119619 + | hypothetical protein PAB1599 1120350 - 1119904 - | hypothetical protein PAB1598 1122458 - 1121079 - | hypothetical protein TERM 391 1122471 - 1122441 - G 71 -6.8 -4.15044 | opp_overlap 1122440 TTCCCTGTCAATAAA CCTACTCACGAGTA TCA TACTCTGGGGTAGG AATGTTCGCTTATGA PAB1597 1125307 - 1124261 - | hypothetical protein TERM 392 1125343 - 1125309 - R 100 -15.8 -3.93782 | opp_overlap 1125309 GGATCGAAGAGCAAA GTATCGCCCCCGATAC TTA GTATCGGTGCCGATAC TTATATTGGTTGCGA TERM 393 1125309 - 1125343 + r 100 -15.8 -3.76048 | opp_overlap 1125309 GGATCGAAGAGCAAA GTATCGCCCCCGATAC TTA GTATCGGTGCCGATAC TTATATTGGTTGCGA TERM 394 1125783 - 1125763 - R 80 -11.3 -2.78715 | opp_overlap 1125765, overlap 1125765 AATTTTTTTACCATA TAGTGACTA TTC TAGTCACTA ACTTGACGAATTTCC TERM 395 1125765 - 1125781 + r 70 -9.5 -2.53392 | opp_overlap 1125765 1125763 TTTTTTTACCATATA GTGACTA TTC TAGTCAC TAACTTGACGAATTT TERM 396 1125781 - 1125765 - R 72 -9.5 -2.94099 | opp_overlap 1125765, overlap 1125763 TTTTTTTACCATATA GTGACTA TTC TAGTCAC TAACTTGACGAATTT PAB1596 1126742 - 1125816 - | hypothetical protein sat 1127913 - 1126774 - | sulfate adenylyltransferase PAB0780 1128245 - 1129666 + | hypothetical protein cysC 1129676 - 1130200 + | adenylylsulfate kinase PAB0782 1130210 - 1130947 + | hypothetical protein PAB0783 1130944 - 1132479 + | polysaccharide biosynthesis related protein graD-3 1132557 - 1133615 + | glucose-1-phosphate thymidylyltransferase rfbB 1133627 - 1134628 + | dTDP-glucose 4,6-dehydratase PAB0785.1n 1134650 - 1134793 + | hypothetical protein PAB7298 1135061 - 1135264 + | hypothetical protein PAB0786 1135265 - 1135666 + | hypothetical protein TERM 397 1135959 - 1135924 - g 95 -12 -4.07133 | gap 1 CACTTCCAGAAAGAA CCTTATGC-GCAGGCAA AGA TTGTCCGCTGCATAAGG GGGGTTATCTTTGAC rfbC 1135723 - 1136280 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 398 1136693 - 1136710 + F 79 -8.5 -4.07993 | opp_overlap 1136692 1136693 TTTAAGGGAAAGAAT TTACGCA ATTT TGCGTAA TCTTTTTAGTCTTTA TERM 399 1137130 - 1137116 - g 76 -4.2 -5.03747 | overlap 1137120 AAACTGGTGAAAAAA GCTACA CTT TGAAGC GCAAACCGGAACTCG PAB0788 1136914 - 1137423 + | hypothetical protein PAB0789 1137420 - 1138271 + | dTDP-4-dehydrorhamnose reductase TERM 400 1138299 - 1138289 - f 74 -4 -5.10656 | ACTAAAATAACAAAA CTTT CAG AAAG AGGCAATTGCCTTAG TERM 401 1138380 - 1138368 - f 80 -10.5 -3.64703 | GGTGTTTTAGGCAAA GGGGC TTC GCCCC TTAAACCCCATTTTT PAB0790 1138481 - 1139344 + | hypothetical protein PAB3293 1139607 - 1139825 + | hypothetical protein TERM 402 1140380 - 1140413 + G 72 -3.1 -4.92756 | gap 1, overlap 1140381 1140385 GTTTATGCTCTTTGT TGTGGTAGGGGCGTTT CTA AAGCTCCCCT-CTGCG TTTGTTTTTGGTGCT PAB2422 1140003 - 1140776 + | hypothetical protein PAB0793 1141337 - 1142776 + | hypothetical protein PAB1592 1143083 - 1142781 - | hypothetical protein PAB1590 1146141 - 1144054 - | hypothetical protein TERM 403 1144434 - 1144447 + g 72 -8.1 -3.74224 | CGTCAACCTTTTCAA GCCAC ATGG GTGGC TTTGGATCATTTGCG PAB0795 1146209 - 1147267 + | rhamnosyl transferase related protein PAB0796 1147280 - 1148275 + | sugar transferase related protein PAB1589 1149284 - 1148250 - | hypothetical protein PAB1588 1149971 - 1149330 - | hypothetical protein PAB1587 1150689 - 1149988 - | glycosyltransferase PAB1586 1153168 - 1150871 - | hypothetical protein PAB1585 1153551 - 1153219 - | hypothetical protein PAB1584 1154490 - 1153996 - | hypothetical protein PAB1583 1155293 - 1154487 - | acetyltransferase PAB1582 1156789 - 1155401 - | hypothetical protein TERM 404 1156763 - 1156799 + g 86 -11.1 -3.71527 | opp_overlap 1156763, overlap 1156765 CTTCCGGTTTACAAA TTTTCGAATCATGATTA TAA TAAACATGATTCGAATA TTTAAATACTTCGGC TERM 405 1156799 - 1156763 - G 87 -11.1 -3.85698 | opp_overlap 1156763 1156765 CTTCCGGTTTACAAA TTTTCGAATCATGATTA TAA TAAACATGATTCGAATA TTTAAATACTTCGGC TERM 406 1156765 - 1156797 + g 90 -13.7 -3.43853 | opp_overlap 1156763, overlap 1156763 TCCGGTTTACAAATT TTCGAATCATGATTA TAA TAAACATGATTCGAA TATTTAAATACTTCG PAB3298 1157541 - 1157356 - | hypothetical protein TERM 407 1158522 - 1158500 - g 70 -10.6 -2.52464 | opp_overlap 1158499 1158500 1158503 GGCCCCTTCAACGGA TTACCAACGC CGA GCGGTGGTAA ATTAGTAGTTGCCGC TERM 408 1158500 - 1158522 + G 70 -10.6 -2.56164 | opp_overlap 1158500, overlap 1158499 1158503 GGCCCCTTCAACGGA TTACCAACGC CGA GCGGTGGTAA ATTAGTAGTTGCCGC for 1158299 - 1160164 + | formaldehyde:ferredoxin oxidoreductase PAB0800 1160198 - 1161178 + | ATP-binding protein PAB0801 1161203 - 1161955 + | NAD-dependent deacetylase PAB0802 1161952 - 1162557 + | putative monovalent cation/H+ antiporter subunit E PAB3299 1162533 - 1162802 + | putative monovalent cation/H+ antiporter subunit F PAB0803 1162795 - 1163106 + | putative monovalent cation/H+ antiporter subunit G PAB0804 1163087 - 1163542 + | putative monovalent cation/H+ antiporter subunit B PAB0805 1163539 - 1163922 + | putative monovalent cation/H+ antiporter subunit B PAB7306 1163925 - 1164203 + | putative monovalent cation/H+ antiporter subunit C PAB0806 1164200 - 1165639 + | putative monovalent cation/H+ antiporter subunit D PAB0807 1166041 - 1166691 + | hypothetical protein PAB1581 1167503 - 1166715 - | hypothetical protein rbcL 1168790 - 1167516 - | ribulose bisophosphate carboxylase PAB1579 1169646 - 1168819 - | hypothetical protein PAB1578 1170797 - 1169643 - | L-tyrosine decarboxylase PAB1577 1171405 - 1170794 - | hypothetical protein PAB1576 1172078 - 1171383 - | phosphoglycolate phosphatase PAB7309 1172127 - 1172378 + | hypothetical protein TERM 409 1172641 - 1172657 + G 89 -10.9 -4.09818 | opp_overlap 1172628, overlap 1172650 AAGGCAACCATCGTT GCAACTC TCG GAGTTGC TTTCTCCTTCATATT TERM 410 1173178 - 1173168 - g 71 -6.8 -4.03093 | GATAACCAGGATAAA GCTC AAC GAGC TGATAAGCGAACTGG napA-4 1172380 - 1173552 + | Na+/H+ antiporter PAB0810 1173575 - 1175221 + | hypothetical protein rad32 1175208 - 1176479 + | DNA repair protein rad32 PAB0812 1176484 - 1179126 + | chromosome segregation protein PAB0813 1179147 - 1180478 + | hypothetical protein TERM 411 1180797 - 1180817 + T 72 -10.5 -2.72461 | opp_overlap 1180795, overlap 1180796 CTCTAACAATGGAGT TTGTGGAGG ATT CCTCCATAA CTTTGCCCCGAATTG PAB1571 1181218 - 1180868 - | hypothetical protein PAB1570 1182162 - 1181629 - | hypothetical protein TERM 412 1182358 - 1182381 + r 80 -4.6 -5.34365 | opp_overlap 1182349 1182358 1182360, overlap 1182360 AAATTATGCAATAAA TAGTTATAGC AATA GCAATAACTG TTTTTCTTCTTCTGG PAB1569 1182783 - 1182361 - | hypothetical protein TERM 413 1182974 - 1182994 + r 70 -9.7 -2.56095 | opp_overlap 1182977 1182980, overlap 1182963 1182970 TGTAGGACCTGCGCA GAAGGACCT TGT AGGTCCTAC TCGGTTGCATGTAGA TERM 414 1182991 - 1182977 - R 77 -10 -3.2963 | opp_overlap 1182963 1182974 1182970, overlap 1182980 AGGACCTGCGCAGAA GGACCT TGT AGGTCC TACTCGGTTGCATGT PAB1566 1183880 - 1183236 - | hypothetical protein TERM 415 1183433 - 1183443 + g 71 -6.8 -4.15222 | GCGCGTACTGGAAGC GGAC TCT GTCC TTTCTTGGAAGGCCT PAB1564 1185967 - 1184456 - | transmembrane transport protein TERM 416 1185275 - 1185299 + g 74 -8.7 -3.84712 | opp_overlap 1185277 1185282, overlap 1185294 GTTCCAACCTTCAAC CATTAAAGATG CCC CATCTTCAATG TTTGCTATCACATTG PAB0816 1186394 - 1187578 + | hypothetical protein PAB0817 1187575 - 1188306 + | mannosyl-3-phosphoglycerate phosphatase manC 1188303 - 1189700 + | mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase pmm 1189702 - 1191072 + | phosphomannomutase (pmm) PAB1562 1192322 - 1191105 - | hypothetical protein PAB1561 1194330 - 1192369 - | DNA helicase, putative PAB0820 1194614 - 1195738 + | hypothetical protein hypF 1198158 - 1195837 - | hydrogenase expression/formation regulatory protein hypD 1199353 - 1198250 - | hydrogenase expression/formation protein hypC 1199581 - 1199354 - | hydrogenase expression/formation protein PAB0821 1199709 - 1200146 + | hypothetical protein PAB0822 1200152 - 1200616 + | hypothetical protein PAB1558 1201428 - 1200799 - | hypothetical protein PAB1557 1201987 - 1201469 - | hypothetical protein PAB1556 1202673 - 1202029 - | hypothetical protein TERM 417 1202234 - 1202246 + g 70 -4.9 -4.45068 | opp_overlap 1202234 TAAAGCACCTCAAAT TTAAC CCC GTTAA TTTCTTCTTCCCCCT PAB1556.1n 1202957 - 1202670 - | hypothetical protein PAB1555 1203936 - 1202944 - | anion transporting atpase PAB1554 1206027 - 1204249 - | carbon starvation protein a TERM 418 1205908 - 1205921 + g 70 -9.5 -3.07962 | overlap 1205918 ATCGTAGAGCCTGTG GGCCG GTGT CGGCC TGTTGGGGTCTGCCC TERM 419 1207703 - 1207689 - g 71 -10 -3.1886 | overlap 1207680 AGGGAACTTCACCAA CTCTCC GGT GGAGAG CTTCAGAGGGTTGCA PAB0824 1207047 - 1208828 + | putative ATPase RIL PAB0825 1208890 - 1209273 + | translation initiation inhibitor, putative PAB0826 1209383 - 1210240 + | hypothetical protein TERM 420 1211223 - 1211213 - gf 73 -2.4 -5.26875 | TCTCCAATCAAAAAA CCGC AAA GAGG CTAGGAAAGCTTGGA PAB0827 1210222 - 1211337 + | galactosyltransferase or LPS biosynthesis rfbu related protein PAB0828 1211306 - 1212022 + | hypothetical protein purB 1212050 - 1213402 + | adenylosuccinate lyase TERM 421 1214190 - 1214175 - g 71 -7.6 -3.90588 | TACTTGGGAATGAAA CTGAAG AGTT CTTCAG GGCAGTTAACGAGAG TERM 422 1214438 - 1214425 - g 79 -9.5 -3.68244 | ATCACTAATTCTAAA CCCCC AGCC GGGGG AAGTGATAGTGGACT PAB0830 1213658 - 1215007 + | proliferating-cell nucleolar antigen P120, putative PAB0831 1215050 - 1215385 + | hypothetical protein TERM 423 1215417 - 1215398 - T 72 -3.5 -5.04377 | opp_overlap 1215398 TGAAAAGAAAAGAAA GGGCC TTCACTTCGT GGCCC TTGTTATTCCAACTT PAB1548 1216735 - 1215404 - | hypothetical protein PAB1547 1218158 - 1216737 - | hypothetical protein dapA 1218280 - 1219164 + | dihydrodipicolinate synthase PAB1546 1219642 - 1219172 - | hypothetical protein PAB1545 1219997 - 1219590 - | hypothetical protein PAB0833 1220558 - 1220884 + | hypothetical protein PAB0834 1221003 - 1221512 + | hypothetical protein PAB1544 1222427 - 1221600 - | hypothetical protein PAB1543 1222765 - 1222424 - | hypothetical protein PAB0835 1222826 - 1223245 + | hypothetical protein TERM 424 1224076 - 1224060 - g 73 -2.2 -5.24449 | TATAAAGCTAAAAAA GCAGCT AGCAA AGCTTC TTCAGGCACAAGGTA TERM 425 1224792 - 1224778 - g 79 -11.4 -3.38297 | overlap 1224772 ATGAAGATAGAGGAA GCCCTC GCC GAGGGC ATCGAGCTTGAGGGA top-RG 1223311 - 1226955 + | reverse gyrase TERM 426 1226949 - 1226966 + F 79 -4.9 -5.07053 | AAAGAGGTACATTAG GAGTTGA TCTT TCAATTC TTTTTTAACATAATT PAB0838 1227147 - 1227962 + | hypothetical protein PAB1540 1228488 - 1228171 - | hypothetical protein PAB1539 1229198 - 1228485 - | arginase family protein PAB1538 1230040 - 1229204 - | met-10+ related protein PAB1537 1230554 - 1230015 - | putative NTPase hemV-2 1231313 - 1230597 - | iron (III) ABC transporter, atp-binding protein hemU-2 1232301 - 1231306 - | iron (III) ABC transporter, permease protein PAB2428 1234773 - 1232320 - | hypothetical protein TERM 427 1232814 - 1232827 + g 71 -9.5 -3.21595 | CTATTGCAGTGTACT CCCCG CTAA CGGGG TTCCTGGTGGGGCTT TERM 428 1232985 - 1232955 - G 70 -4.7 -4.4078 | gap 1, overlap 1232957 CTTCTTTAACCAAAA GTTCGAGGGCCTTG CTTC CAAGGCC-TAGATC CATGGCATCGGGATG TERM 429 1234048 - 1234062 + g 70 -10 -2.98783 | overlap 1234047 GGGAATCTCGACCTT CTCCCT TTC AGGGAG CTTTGCTTGGCTTTT PAB1533 1235359 - 1234823 - | hypothetical protein TERM 430 1235123 - 1235135 + g 76 -4.9 -4.86731 | opp_overlap 1235106 1235105, overlap 1235106 1235105 GAACTTCTCCTCAAG TTCAA GTA TTGAA TTTTCTTTCCCACCG PAB1532 1237919 - 1235892 - | hypothetical protein TERM 431 1236809 - 1236795 - G 82 -7.8 -4.56367 | CAGGGGATAAAGAAA CCTAGG CAC CCCAGG GAGTGGAAATACCAG TERM 432 1237344 - 1237356 + g 72 -6.3 -4.27467 | GAGCAGAGACTTCCA GAAGT TCA ACTTC TTTATCTTAATCTTC PAB1531 1239975 - 1237903 - | hypothetical protein PAB3319 1240259 - 1239972 - | hypothetical protein TERM 433 1240269 - 1240281 + r 85 -6.9 -5.00895 | CCTCACTTTCTCACC CCCGG CTT CTGGG TTTTTCTATCGTAGC alkA 1241086 - 1240256 - | 3-methyladenine DNA glycosylase TERM 434 1240895 - 1240907 + g 72 -4.9 -4.564 | AGTATCCAAGCCTAG GATAA AGC TTATC TTTTCCTTTACAATT PAB0842 1241179 - 1241718 + | transcription factor PAB2386 1243092 - 1241719 - | 4-aminobutyrate aminotransferase PAB1527 1244685 - 1243132 - | amino acid carrier protein TERM 435 1244974 - 1244997 + G 80 -5.4 -4.94902 | gap 1, overlap 1244992 TAGTTCTGCTTATGT TCTCAATCTAC CTG GTAG-TTGGGA TTTTTCTCCTAATTC PAB0846 1244820 - 1245650 + | hypothetical protein PAB0847 1245640 - 1246044 + | hypothetical protein moxR-3 1246028 - 1246972 + | methanol dehydrogenase regulatory protein PAB0849 1246979 - 1248211 + | hypothetical protein TERM 436 1248519 - 1248547 + G 100 -14.7 -4.11216 | opp_overlap 1248507 AATCCTAGGTTTCTT GGCCTATGGCA CGATCTA TGCCATAGGCC TTTTAGGAATAGGAA PAB0850 1248208 - 1248639 + | hypothetical protein PAB1524 1249834 - 1248629 - | hexuronate transporter related protein aspB-2 1251042 - 1249870 - | aspartate aminotransferase PAB1522 1251606 - 1251091 - | hypothetical protein TERM 437 1251488 - 1251506 + g 76 -2.4 -5.27335 | TTAACCTTAGCTATG CAGAGCTT TCC AAACTTTG TTTTTATTTCGAGCA PAB1522.1n 1251723 - 1251911 + | hypothetical protein ftsZ-2 1251931 - 1253172 + | cell division protein FtsZ soj 1253221 - 1253994 + | hypothetical protein PAB0853 1253978 - 1254310 + | hypothetical protein PAB0854 1254410 - 1255783 + | hypothetical protein iorA-1 1255784 - 1257730 + | indolepyruvate ferredoxin oxidoreductase, subunit alpha iorB-1 1257727 - 1258335 + | indolepyruvate oxidoreductase subunit B PAB1518 1259656 - 1258325 - | Na+/H+ antiporter, putative PAB1517 1260086 - 1259649 - | putative transcriptional regulator PAB1517.1n 1260427 - 1260708 + | hypothetical protein PAB0859 1260692 - 1261093 + | hypothetical protein PAB1516 1262943 - 1261534 - | hypothetical protein TERM 438 1262688 - 1262704 + g 75 -2.9 -5.24129 | opp_overlap 1262687 1262684, overlap 1262685 ACTCAAAGAATGCAT CCCAGTT CTG GAATGGG TTTTTTCTAAGAAGA thyX 1263198 - 1263932 + | FAD-dependent thymidylate synthase TERM 439 1263929 - 1263971 + F 73 -5.6 -4.56597 | opp_overlap 1263933, overlap 1263930 1263933 TCTCGAAAAACCCTT ATAACTTACCCCGGGGTAAG TAA CTTATGGTGGGGTAAGTTGC TTTTTGACCCAAGGC TERM 440 1263930 - 1263970 + F 72 -9.1 -3.33744 | opp_overlap 1263933, overlap 1263929 1263933 CTCGAAAAACCCTTA TAACTTACCCCGGGGTAAG TAA CTTATGGTGGGGTAAGTTG CTTTTTGACCCAAGG TERM 441 1263933 - 1263967 + F 77 -8.6 -3.80855 | opp_overlap 1263933, overlap 1263930 1263929 GAAAAACCCTTATAA CTTACCCCGGGGTAAG TAA CTTATGGTGGGGTAAG TTGCTTTTTGACCCA PAB0862 1263968 - 1265053 + | hypothetical protein PAB0863 1265093 - 1265698 + | multiple antibiotic resistance protein related PAB1515 1266826 - 1265699 - | hypothetical protein TERM 442 1267387 - 1267375 - g 70 -9.1 -3.43007 | overlap 1267373 ACCAGCCAAAATAGA GAGGG AAA CCCTC ATAAAGTTCGGAAAA PAB0865 1266947 - 1267735 + | hypothetical protein PAB1513 1268867 - 1267725 - | hypothetical protein TERM 443 1268005 - 1268015 + g 72 -8.2 -3.72576 | opp_overlap 1267989 1267999 GCCCTCAAAGTGCTC GGGC CTA GCCC TTTAATCAGAAGAAA TERM 444 1268480 - 1268447 - G 77 -9 -3.85817 | gap 1 ACGTGTGGTGATAAA GCTGATAAC-CGGCC TGAAG GGCCACGTTATCAAC CTTGGCTACCAACCT PAB3329 1268916 - 1269209 + | hypothetical protein PAB1512 1269564 - 1269190 - | hypothetical protein PAB1511 1270684 - 1269557 - | alcohol dehydrogenase, iron-containing PAB1510 1271360 - 1270689 - | hypothetical protein hypE 1271474 - 1272484 + | hydrogenase expression/formation protein PAB1509 1272938 - 1272471 - | hypothetical protein TERM 445 1273116 - 1273098 - g 76 -7.4 -4.32402 | CCTGAAGGAAAACAA CGTGAAGT TCT ACTACACG AATAAAGGCGCGCTA PAB0869 1272991 - 1273998 + | glucanase PAB0870 1273995 - 1274516 + | ribosomal protein S18 alanine acetyltransferase related PAB1507 1274959 - 1274513 - | glycerol-3-phosphate cytidyltransferase, putative PAB1506 1275456 - 1274938 - | hypothetical protein PAB1505 1276084 - 1275458 - | orotidine 5'-phosphate decarboxylase PAB1504 1276671 - 1276081 - | hypothetical protein PAB0872 1276790 - 1277839 + | hypothetical protein PAB1503 1278435 - 1277809 - | hypothetical protein argF 1279548 - 1278595 - | ornithine carbamoyltransferase dph5 1280468 - 1279680 - | diphthine synthase PAB0873 1280647 - 1281798 + | amino acid amidohydrolase pyrI 1282246 - 1281788 - | aspartate carbamoyltransferase regulatory subunit pyrB 1283173 - 1282247 - | aspartate carbamoyltransferase catalytic subunit TERM 446 1283034 - 1283024 - G 72 -3.2 -5.02476 | AGATGGCTCAAAAAA CAGC GTT GCTA GGATTTTTCCCTTTG TERM 447 1283211 - 1283224 + H 87 -5.3 -5.4433 | opp_overlap 1283211, overlap 1283205 GCTTGGGTATATAAA CCTTT ACGA AAAGG TTTTTATTTATATAT PAB7338 1283264 - 1283563 + | hypothetical protein TERM 448 1284277 - 1284317 + G 83 -10.5 -3.70811 | overlap 1284287 1284310 AGTTACGCATTTACG CTATGGAAGGCTGAAGAGC TCG GCTATTCAGTTTTCCAGGG TTTGGGATTCTATGC TERM 449 1284287 - 1284307 + G 76 -8.3 -4.12942 | overlap 1284277 TTACGCTATGGAAGG CTGAAGAGC TCG GCTATTCAG TTTTCCAGGGTTTGG PAB0874 1283566 - 1284744 + | major facilitator transporter TERM 450 1284736 - 1284754 + F 71 -6 -4.23386 | opp_overlap 1284736 1284740, overlap 1284732 GCCTTACTAATTAAG GAAAGCTA GCT TAGCTCTC TTATCTTTTTTATGG TERM 451 1285154 - 1285133 - g 83 -6.7 -5.03747 | gap 1, opp_overlap 1285149 AAAGTTTTGAAAAAA GGAA-AAGCT AAT AGCTTCTTCC CAGTCTTTGTGAAGG PAB0875 1284923 - 1286287 + | hypothetical protein TERM 452 1286734 - 1286717 - gf 77 -3.5 -5.16237 | AACTCCATTAAAAAA GAAAATA TTGC CATTTTC ATAACTCCAAAAGTT TERM 453 1287142 - 1287130 - gf 70 -7.7 -3.76373 | CCCGGAAGATTTAAA CGCTA ACT TAGCG ATAGAAACGGAGCTT PAB0876 1286348 - 1287517 + | hypothetical protein TERM 454 1287621 - 1287603 - gf 73 -7.4 -4.05446 | overlap 1287588 CTCTCGAAGTACAAA CCTCCAGA AAT CCTAGAGG ATATAGAGGGTAAGA PAB0877 1287444 - 1288334 + | hypothetical protein PAB0878 1288348 - 1288761 + | hypothetical protein PAB1496 1289362 - 1288736 - | hypothetical protein TERM 455 1289509 - 1289491 - g 71 -7.4 -3.90291 | ACGTTGTCAAGGAAA TGGCCCTA CGG TAGGGACA TCTACCAAGAGCTGG TERM 456 1289905 - 1289892 - g 73 -2.3 -5.13354 | CCTAGAAAAAATAAA GGCTT ACGA AGGCC CAACATCGGAGCTCC PAB0880 1289413 - 1290522 + | hypothetical protein TERM 457 1290697 - 1290686 - g 73 -4.4 -4.82091 | AAGGAAATAAACAAA CTCA GGCA TGAG AGGAATAAAATAGCC serS 1290539 - 1291906 + | seryl-tRNA synthetase TERM 458 1292019 - 1292003 - g 71 -9.5 -3.18913 | opp_overlap 1291996 1292002 1291999, overlap 1291994 1291992 1291996 AAGATAGAGAGTCAA GGATTCT CTT AGAATCC CTAATATCCTCGGGA TERM 459 1292075 - 1292065 - g 74 -8.2 -3.9693 | GAGCCATCCAAAGAA GCCC TAA GGGC AGTTAAAAATGCAGC PAB0882 1291891 - 1292376 + | hypothetical protein PAB1493 1292820 - 1292407 - | hypothetical protein nusA 1293356 - 1292844 - | transcription elongation factor NusA-like protein mgtE-like 1293490 - 1294686 + | mg2+ transport protein (mgte) aIF-2BI 1294691 - 1295761 + | translation initiation factor IF-2B subunit beta TERM 460 1297132 - 1297112 - gT 74 -3.3 -5.08011 | opp_overlap 1297115, overlap 1297115 AAAATTTTGAAAAAA GAAGTTCAG CCC CTAAACTTT GGTCTCTTTGAGAGG TERM 461 1297129 - 1297115 - gT 72 -5 -4.62085 | opp_overlap 1297115, overlap 1297112 ATTTTGAAAAAAGAA GTTCAG CCC CTAAAC TTTGGTCTCTTTGAG thrS 1298994 - 1297117 - | threonyl-tRNA synthetase PAB0885 1295852 - 1297174 + | hypothetical protein ndk 1299515 - 1299027 - | nucleoside diphosphate kinase TERM 462 1299413 - 1299427 + g 71 -7.2 -4.08948 | TCTTTAACCCCCTCT TCTCAA ACC TTGAGA TTATTTCTCCAATTA PAB2385 1301657 - 1299744 - | DNA repair helicase rad3 TERM 463 1301753 - 1301732 - H 71 -9.5 -2.74865 | overlap 1301729 ACGACATAGACATCA GCAGTCAAC TCGG GTTGACTAC GCTAGAATATTGTCA PAB0887 1301966 - 1302400 + | hypothetical protein TERM 464 1304353 - 1304384 + G 75 -9.5 -3.58533 | gap 1, overlap 1304341 TCACCCTGAGGATGA TGTTCTCCCCATGG TTCCT CC-TGGGGAGCACA TTTCCAAGGTTGTAA ilvB 1302722 - 1304410 + | acetolactate synthase, large subunit ilvC 1304412 - 1305410 + | ketol-acid reductoisomerase leuA-1 1305441 - 1306901 + | 2-isopropylmalate synthase leuC-1 1306942 - 1308213 + | 3-isopropylmalate dehydratase large subunit TERM 465 1308626 - 1308637 + G 72 -5.8 -4.4648 | AGTCTACAGGGCCAA TCCG TTCC CGGA TTTTATAATGGAGAT leuD 1308210 - 1308704 + | 3-isopropylmalate dehydratase small subunit TERM 466 1308798 - 1308782 - g 76 -2.2 -5.41746 | AAGGTCCTAAAAAAA CTTGAG GAACT CTCGAG GGTGTCATTTGAGTT leuB-1 1308701 - 1309765 + | 3-isopropylmalate dehydrogenase leuA-3 1309743 - 1311323 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 467 1311348 - 1311363 + G 71 -7.5 -3.9122 | AAAGGGGATTGAGAG GGCCC CACATA GGGCC TTATTTAAAGCAATG ilvD 1311313 - 1312968 + | dihydroxy-acid dehydratase PAB0896 1312994 - 1313848 + | hypothetical protein PAB0897 1313880 - 1314305 + | hypothetical protein PAB0898 1314268 - 1314636 + | hypothetical protein PAB0899 1314721 - 1315107 + | hypothetical protein PAB0900 1315083 - 1315397 + | hypothetical protein PAB1478 1318722 - 1316200 - | cell division control protein TERM 468 1317423 - 1317437 + g 76 -8.6 -4.1193 | CCTCACTCTTAGCTT TCGAGA CCT TCTCGA TTATCTTTTTGATCT PAB1477 1319494 - 1318703 - | hypothetical protein PAB1476 1320529 - 1319525 - | pyruvate ferredoxin oxidoreductase subunit beta porA 1321718 - 1320531 - | pyruvate ferredoxin oxidoreductase subunit alpha porD 1322047 - 1321730 - | pyuvate ferredoxin oxidoreductase subunit delta PAB1473 1323011 - 1322076 - | 2-ketoisovalerate ferredoxin oxidoreductase subunit beta TERM 469 1322371 - 1322391 + g 79 -9.7 -3.68936 | AGCTGGATGAAGCTC GGCCCAGGA ATC TTTTGGGCC TTCTTGAGCTTCCTC TERM 470 1322391 - 1322412 + g 76 -11.7 -2.64616 | AGGAATCTTTTGGGC CTTCTTGAG CTTC CTCAAGAAG TCCTCTGGATAAGCG vorA 1324204 - 1323017 - | 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha vorD 1324523 - 1324206 - | 2-ketoisovalerate ferredoxin oxidoreductase subunit delta PAB1470 1325109 - 1324552 - | pyruvate ferredoxin oxidoreductase subunit gamma acaA 1325336 - 1326388 + | hypothetical protein TERM 471 1327192 - 1327176 - g 76 -8.7 -4.19238 | TTGCTAACGCTAAAA GCAGCCA AAA TAGCTGC GGAGAAGGCTTATAA acaB 1326399 - 1327565 + | acetyl-CoA acetyltransferase acaC 1327567 - 1327971 + | acaC protein vhtD 1327994 - 1328443 + | F420-nonreducing hydrogenase PAB7348 1328440 - 1328679 + | hypothetical protein PAB0910 1328681 - 1329271 + | hypothetical protein PAB0911 1329272 - 1329790 + | hypothetical protein TERM 472 1330041 - 1330025 - g 72 -8.7 -3.80733 | overlap 1330035 CGGACTTTATAATAA TGCCATG TAA CACGGCA CATGCTTTCATAGAG racD-1 1329787 - 1330473 + | aspartate racemase PAB0913 1330732 - 1331964 + | multidrug resistance protein PAB1466 1332518 - 1331961 - | hypothetical protein pol30 1333299 - 1332550 - | DNA polymerase sliding clamp PAB1464 1333782 - 1333450 - | DNA-directed RNA polymerase subunit M PAB2425 1333860 - 1334489 + | hypothetical protein TERM 473 1334598 - 1334580 - gf 71 -6 -4.13995 | opp_overlap 1334585, overlap 1334584 1334585 TTCGTACAAAGGAAA CAAAGCTA GGG TAGCCCTG GTGATATGTTCCTTT TERM 474 1334594 - 1334584 - gf 74 -5.4 -4.65182 | opp_overlap 1334585, overlap 1334580 1334585 TACAAAGGAAACAAA GCTA GGG TAGC CCTGGTGATATGTTC nfi 1334470 - 1335054 + | endonuclease V PAB0917 1335014 - 1335652 + | hypothetical protein pheS 1335867 - 1337369 + | phenylalanyl-tRNA synthetase subunit alpha TERM 475 1338003 - 1337973 - g 71 -10.4 -2.73554 | overlap 1337972 TTAATCAAGGACAAG CCCCACTACCCCCT CTT AGTGGATAGCGAGG GTAACGTCCTCTCAA pheT 1337385 - 1339055 + | phenylalanyl-tRNA synthetase subunit beta TERM 476 1339224 - 1339209 - T 83 -6.2 -5.04987 | AATATGTCCAAAAAA CTTTAC AAAA GTAAAG ACAAAGTTTAATCAT PAB2383 1340636 - 1339257 - | hypothetical protein TERM 477 1340658 - 1340629 - G 76 -11.7 -2.71325 | opp_overlap 1340627, overlap 1340625 1340633 CGATCCACAAATTTA CTAATCATGATTA GTAC TAATCACGATTAG GATTTAAGGCTTCCG tdh 1341742 - 1340696 - | L-threonine 3-dehydrogenase PAB1459 1342740 - 1341814 - | hypothetical protein PAB1458 1343804 - 1342737 - | hypothetical protein PAB1457 1346261 - 1343817 - | secretory protein kinase TERM 478 1346128 - 1346145 + g 72 -6.3 -4.36348 | AATGACTCAGTTTTT GGAAGAG GTGT TTCTTCC TTCTTTTCCTCTTTT PAB1456 1347175 - 1346258 - | hypothetical protein PAB1455 1348622 - 1347180 - | hypothetical protein PAB0921 1348704 - 1349045 + | hypothetical protein TERM 479 1349581 - 1349567 - gf 79 -10 -3.6149 | AGCTAATAAGGAGAA TCCTGG AAA CCAGGA AAGAAGCGCTAACAG PAB0922 1348993 - 1350060 + | GTP-binding protein PAB0923 1350072 - 1351163 + | hypothetical protein PAB1452 1352330 - 1351116 - | hypothetical protein TERM 480 1351309 - 1351325 + g 73 -10.9 -2.75844 | opp_overlap 1351298, overlap 1351308 CCCACCGGATCCTCC GCCAATG GTT CATTGGC CTTTGGGCTGAACGG PAB1451 1353048 - 1352371 - | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase PAB1450 1354698 - 1353412 - | hypothetical protein TERM 481 1354244 - 1354228 - GR 70 -5.9 -4.32482 | AGCTATAAGCGAAAA TCCATAA TAT CTATGGA GTGTATCAAGGGCGG TERM 482 1354296 - 1354285 - GR 76 -4.4 -4.91977 | GATTAAAAGATAAAA GATG CGAA CATC CTGAGCAAATCTTAC PAB1449 1355443 - 1354655 - | hydrolase related TERM 483 1355096 - 1355081 - GH 81 -3.3 -5.27938 | overlap 1355083 AGGCTCAAAGAAAAA CTTCT CCCTAT AGAAG AGGTGTATCTTCCTG PAB0926 1355829 - 1356473 + | exonuclease sbcd related PAB0927 1356541 - 1357758 + | phosphate permease PAB0929 1357764 - 1358435 + | hypothetical protein PAB0930 1358726 - 1359286 + | hypothetical protein PAB7359 1359612 - 1359385 - | hypothetical protein TERM 484 1360281 - 1360259 - g 74 -8.4 -3.99494 | overlap 1360256 1360268 GGAAGGTAAGAAGAA TCCAGAGGAC TTC GCCCTGTGGA AGAAGGCAAAGCCCG cysS 1359729 - 1361162 + | cysteinyl-tRNA synthetase PAB1446 1362229 - 1361465 - | coenzyme PQQ synthesis protein III related PAB1445 1362570 - 1362223 - | 6-pyruvoyl-tetrahydropterin synthase rpl10e 1363168 - 1362623 - | 50S ribosomal protein L10e PAB1443 1363995 - 1363231 - | zinc/iron permease PAB1442 1364323 - 1363988 - | hypothetical protein PAB1441 1365760 - 1364333 - | pyruvate kinase TERM 485 1364807 - 1364834 + g 73 -10.6 -3.10522 | gap 1, overlap 1364785 TGGGAATTTTCCAAT CGCGGTC-TCCTC AGA GAGCATGACCGCG TCTGTTCCGTCAAGT TERM 486 1366794 - 1366764 - g 70 -9 -3.41988 | overlap 1366765 1366791 CCCCAGGGAACAAGA TGGGCTACGTTGCT GGA AGCAACATAGCCGG AAAGGAGATACACTT TERM 487 1366793 - 1366765 - g 78 -12.5 -2.64872 | overlap 1366764 1366791 CCCAGGGAACAAGAT GGGCTACGTTGCT GGA AGCAACATAGCCG GAAAGGAGATACACT noxA-1 1365842 - 1367182 + | NADH oxidase (noxA-1) PAB1440 1367638 - 1367159 - | alanyl-tRNA synthetase fragment PAB1439 1369046 - 1367640 - | dinF related TERM 488 1368607 - 1368596 - G 71 -7.2 -4.07675 | TGAAAAGGAAGGAAA CCGG GACT CCGG CGAATATAACTATAG PAB1438 1370392 - 1369043 - | DNA damage-inducible protein TERM 489 1370696 - 1370723 + G 72 -6.2 -4.25104 | opp_overlap 1370703, overlap 1370700 TCAACGTGTTCTTCA GGGACAACCCCG AGTA CGAGGTTGTTGC TTTTACTGCCACACA PAB0938 1370521 - 1371963 + | hypothetical protein PAB0939 1372000 - 1372608 + | hypothetical protein TERM 490 1372849 - 1372826 - g 75 -9.6 -3.62644 | overlap 1372838 CTCACAAGGATAGAA GACCCCTACA CACT TGTAAGGGCC CTACTAGTTACCGGC TERM 491 1373743 - 1373733 - g 74 -5.4 -4.56133 | TTTCAATAATTAAAA GGTT AAA AACC GAGAAGGCCAGGTCA PAB0940 1372667 - 1373959 + | hypothetical protein PAB0941 1374182 - 1374583 + | hypothetical protein moaD 1374864 - 1374580 - | molybdopterin converting factor, subunit 1 moeA-1 1376059 - 1374851 - | molybdenum cofactor biosynthesis protein TERM 492 1376202 - 1376148 - R 100 -15.2 -3.07935 | gap 3, overlap 1376196 AGCCTAGCCAGGGAA GGCGCGGGACTCGAGATCCC-GTGGGC GTTC GCCCACCGGGGT-TCAAATCCC-CGCC CCGGCGCCACCTGCC PAB1435 1376624 - 1376190 - | putative endonuclease PAB1434 1377513 - 1376626 - | methionine aminopeptidase PAB1433 1378307 - 1377555 - | hypothetical protein nifs-like 1378366 - 1379526 + | capreomycin acetyltransferase or nifs-like protein PAB1431 1380851 - 1379523 - | hypothetical protein TERM 493 1379572 - 1379589 + g 87 -9.9 -4.22554 | AGAGCTTTAGCCGCC CTTTCCG GCGT CGGAAAG TTCTTTATTCCATGA PAB0944 1380903 - 1381376 + | phosphopantetheine adenylyltransferase PAB2372 1381451 - 1381924 + | hypothetical protein topA 1383982 - 1381925 - | DNA topoisomerase I PAB1429 1385910 - 1383979 - | hypothetical protein TERM 494 1384300 - 1384315 + g 70 -9 -3.31461 | TTCGGCTATCCTCCT TCCTGC TCCC GCAGGA TTCTCAACGTAAATA TERM 495 1385887 - 1385916 + g 82 -2.9 -5.55698 | gap 1 TCCCTTTCTCTCAAT TTTCCCGTTG-AAC CAT GTTACCACGGCAAA TTTTTTTGGATTCTC TERM 496 1386059 - 1386075 + H 72 -10.1 -2.62263 | opp_overlap 1386070 TTGAACCCGCGACCA CCGGGTT AAA AGCCCGG TGCTCTGACCAGGCT TERM 497 1386089 - 1386070 - H 73 -7.1 -4.08945 | opp_overlap 1386059 ACCACCGGGTTAAAA GCCCGGT GCTCTG ACCAGGC TGAGCTACCGGCCCA PAB0950 1386592 - 1387164 + | transcription initiation factor E subunit alpha TERM 498 1387546 - 1387536 - g 77 -6.8 -4.39828 | AACATTTGGAGAAAA GCCT GTG AGGC AAATGATAAGGGAAT PAB0951 1387171 - 1387914 + | hypothetical protein PAB1428 1388644 - 1387883 - | hypothetical protein rps6E 1389119 - 1388742 - | 30S ribosomal protein S6e PAB0953 1389242 - 1390243 + | hypothetical protein PAB1426 1391118 - 1390240 - | hypothetical protein minD-2 1391206 - 1391943 + | cell division inhibitor (minD-2) PAB0955 1391946 - 1392779 + | GTPase PAB0956 1392823 - 1393329 + | hypothetical protein TERM 499 1395736 - 1395761 + G 71 -6.9 -4.09685 | gap 1, overlap 1395738 CGAGTTCACGGGAGG CT-GGGTTCTAG AGG CTGGAGCCCTAG TTTTGGCCGATGGGG TERM 500 1395738 - 1395758 + G 70 -9.7 -3.08508 | overlap 1395736 AGTTCACGGGAGGCT GGGTTCTAG AGG CTGGAGCCC TAGTTTTGGCCGATG cdc21 1393322 - 1396660 + | cell division control protein PAB0959 1396704 - 1397126 + | translation initiation factor IF-2 subunit beta TERM 501 1397579 - 1397597 + F 70 -9.5 -2.60615 | opp_overlap 1397592, overlap 1397578 ATTTGAACCCGGGGC GCGGGCT CGAAA GGCCCGC ATGTTTGACCGGGCT PAB0960 1397712 - 1398128 + | nickel responsive regulator PAB0961 1398228 - 1399406 + | dehydrogenase PAB1422 1400440 - 1399364 - | hypothetical protein PAB1421 1401194 - 1400400 - | hypothetical protein TERM 502 1400499 - 1400511 + gH 74 -9.1 -3.55563 | opp_overlap 1400499 CTCCTTGTGGACGAA GAGGG TTA CCCTC TTTAACGGCTCGCAT TERM 503 1400511 - 1400499 - GH 70 -9.1 -3.14132 | opp_overlap 1400499 CTCCTTGTGGACGAA GAGGG TTA CCCTC TTTAACGGCTCGCAT TERM 504 1401881 - 1401891 + G 71 -6.8 -4.11394 | opp_overlap 1401880 1401881 ACTTTTGAGGGAAAG CGAC TTC GTCG TTTTAGCCGTACCCT gdh-like 1401264 - 1402271 + | glyoxylate reductase PAB1420 1403593 - 1402265 - | hypothetical protein PAB1419 1404320 - 1403718 - | pyrrolidone-carboxylate peptidase TERM 505 1403993 - 1404003 + g 76 -8.2 -4.16943 | TGGTTGCAAAGTACG CGGC TGG GCCG TTTTCAACTATGGGC PAB1418 1406215 - 1404317 - | peptidase PAB2381 1407054 - 1406212 - | hypothetical protein PAB2380 1408094 - 1407060 - | hypothetical protein TERM 506 1407875 - 1407847 - G 72 -8.1 -3.77087 | overlap 1407841 TACTCAACAGCTAAA TCCAGCTTTCCGA GCT TCGAGTAGCTGGA GGCCACCTCAGAATA PAB0965 1408147 - 1408713 + | hypothetical protein PAB0966 1408674 - 1409141 + | signal peptidase PAB0967 1409207 - 1410565 + | ADP-specific phosphofructokinase TERM 507 1410579 - 1410593 + F 76 -7.2 -4.26327 | overlap 1410576 GATCAACTTCTTTTA GCTTAA GCA TTAAGC TTATTTTAATCAATG PAB0968 1410606 - 1411397 + | hypothetical protein PAB1413 1411887 - 1411414 - | hypothetical protein PAB1412 1412531 - 1411884 - | hypothetical protein TERM 508 1412746 - 1412773 + r 70 -8.6 -3.2779 | gap 1, overlap 1412763 1412764 AACTCAGCCCTATCG CTGGAGTATCCTT TTC AAGGA-ACTCTAG TTCCCTCTTTCTATC PAB1411 1414525 - 1413389 - | dolichol-p-glucose synthetase PAB1410 1415606 - 1414500 - | LPS biosynthesis rfbu related protein TERM 509 1415040 - 1415051 + gr 74 -5.8 -4.59293 | overlap 1415049 AAAAATCACGTCATA CTCC TGGG GGAG TTTCTTTACTCTTTG TERM 510 1415626 - 1415638 + r 74 -4.9 -4.74801 | TTACACTCATATGGG CATTA TTT TAATG TTTTTGGTGGCATTA PAB1409 1417029 - 1415758 - | hypothetical protein TERM 511 1416121 - 1416131 + g 73 -4 -4.87273 | CGCAAAAATCATGGC CTTT CTT AAAG TTTTTCTGAAATATT PAB1409.1n 1419589 - 1417247 - | hypothetical protein TERM 512 1418479 - 1418465 - GR 79 -2.8 -5.29445 | TTGGAAGAAGAAAAA GATTAC CGG GGAATC CCTATATACCGCACT TERM 513 1418853 - 1418835 - GR 83 -6 -5.14985 | opp_overlap 1418835 1418839, overlap 1418829 GCAAAGATAGAAAAA GAAACTAC CAG GTAGTATC TCTTGCCGGTGCCCT PAB1409.2n 1420265 - 1419519 - | hypothetical protein PAB1409.3n 1422882 - 1420372 - | hypothetical protein TERM 514 1420767 - 1420750 - G 71 -9.9 -3.21747 | CCACTGGATTACGAA GACGTCT TCCC AGACGTC GTACCACTGCTCATC PAB0973 1423135 - 1424307 + | LPS biosynthesis rfbu related protein TERM 515 1425251 - 1425238 - g 70 -5.3 -4.40963 | opp_overlap 1425238, overlap 1425235 AGCTCGGAAAAATAA GAGAT GCAT ATCTC TTTATTCATCTGCAC PAB0974 1424421 - 1426721 + | transmembrane oligosaccharyl transferase, putative PAB0975 1426991 - 1427527 + | hypothetical protein TERM 516 1427751 - 1427767 + G 71 -8 -3.88137 | opp_overlap 1427749 GAGGTCGCAATGATG GCCATG CCCTA CATGGC TTTCTCCAAGGTTAT PAB0976 1427583 - 1428185 + | hypothetical protein PAB1403 1428795 - 1428364 - | hypothetical protein PAB1402 1430300 - 1428801 - | putative monovalent cation/H+ antiporter subunit D TERM 517 1429077 - 1429065 - G 71 -3.4 -4.78764 | CAAAGCTAGGAAAAA GCTT TTCTC AAGC AGGGCATTGAATAGC PAB1401 1430796 - 1430311 - | hypothetical protein PAB1400 1431164 - 1430793 - | hypothetical protein PAB1399 1431880 - 1431161 - | hypothetical protein PAB1398 1432472 - 1432128 - | hypothetical protein PAB1396 1433820 - 1433005 - | hydrogenase-4 component i PAB1395 1434374 - 1433817 - | hydrogenase-4 component b PAB1394 1436141 - 1434375 - | hydrogenase-4 component g TERM 518 1435680 - 1435640 - G 84 -10.3 -3.92522 | opp_overlap 1435646 1435649 TCCTAAGTGGATAAA CTCCATCGGGCCAGTCCTC GGG GAGGACTAGCCTCCTGGGG TCTGGATGGTTTATT PAB1393 1437044 - 1436145 - | hydrogenase-4 component c TERM 519 1436447 - 1436414 - G 72 -5.9 -4.46212 | overlap 1436415 TTGCGTAGTAGAAAA TCCCTAGCAGTCTAC CGCT GTACTCTGCCAGGGG CCCTCCAATTACTTC TERM 520 1436704 - 1436692 - G 71 -7.7 -3.89614 | CCTAAGTGCGAGAAA GCGTT CTG AACGC TGAAGCCCGCTAGCA PAB1392 1438984 - 1437041 - | hydrogenase-4 component b PAB1391 1440441 - 1438981 - | hydrogenase 4 subunit D TERM 521 1439541 - 1439525 - G 71 -9.5 -3.27498 | GATATTGTAGAGTAA GCTAAGA GTC TCTTAGC GTCCCTCTGGAGTGG PAB1390 1440948 - 1440454 - | formate dehydrogenase iron-sulfur subunit related protein PAB1389 1443021 - 1440961 - | alpha subunit of formate dehydrogenease TERM 522 1442892 - 1442906 + g 71 -3.5 -4.78752 | overlap 1442893 CCTTGGGGCATAATT TTCCC TTGTT GGGAG TTTTTGGGTTATAAT PAB0980 1443349 - 1443807 + | hypothetical protein TERM 523 1444041 - 1444068 + G 73 -7.8 -4.09685 | gap 1, overlap 1444017 GCCTTGTGGCCACAT TTGGTCTCGTACT TGG AGT-CGGGGCCAA TTTTAGGGACTACAA PAB0981 1443989 - 1444594 + | hypothetical protein TERM 524 1444630 - 1444648 + G 72 -8.1 -3.67498 | AAGTTGTTTGGAATT GCCCTGT TCCTT GCAGGGC TTATGTTGGCGGTTG PAB0982 1444609 - 1445136 + | hypothetical protein PAB0983 1445176 - 1446159 + | signal peptidase related PAB0984 1446150 - 1446551 + | hypothetical protein PAB0985 1446544 - 1447461 + | hypothetical protein PAB1388 1449373 - 1447445 - | hypothetical protein PAB1387 1451095 - 1449377 - | flagellar assembly protein J TERM 525 1450685 - 1450671 - G 75 -6.4 -4.39571 | GCTAGAAACCTAAAA GCCTCT GGC AGAGAC CTGTGAAGCTTGTCA PAB1386 1452712 - 1451099 - | putative flagella-related protein i TERM 526 1452075 - 1452092 + g 79 -9.9 -3.66018 | TCGCTCACGGGCCTC CCTATCC TCTC GGATAGG TTCTTCAGGTAATCG PAB1385 1453412 - 1452714 - | flagellar accessory protein FlaH PAB1384 1453920 - 1453426 - | putative flagella-related protein g TERM 527 1453696 - 1453714 + g 71 -10.3 -2.64045 | overlap 1453695 TGTATAATTGTAAGG CCCCGTT CCACT AACGGGG ATATTGTTGGGATCG PAB1383 1454366 - 1453899 - | hypothetical protein PAB1382 1455644 - 1454385 - | putative flagella-related protein d or e TERM 528 1454654 - 1454637 - G 73 -9.9 -3.4072 | opp_overlap 1454622 1454637 1454636 1454634 GATCTCGTAGTAGAA CTCGAGA ACCT TCTCGAG ATTCTGTATACCGAC PAB1381 1456130 - 1455648 - | flagella-related protein c TERM 529 1456143 - 1456116 - G 93 -12.8 -3.7212 | gap 1, overlap 1456119 AAATAGGGAAGATAA GAAGTCGAGGGCC ATC GGCCCTC-ACCTC ACTGGAGCTCAATAC TERM 530 1456141 - 1456119 - G 87 -11.2 -3.97511 | overlap 1456116 TAGGGAAGATAAGAA GTCGAGGGCC ATC GGCCCTCACC TCACTGGAGCTCAAT PAB1380 1456810 - 1456142 - | flagellin PAB1379 1457480 - 1456821 - | flagellin TERM 531 1457010 - 1457026 + g 74 -5.9 -4.65078 | TCCCCATTCTAAGTT TGGATAA TCT TTGTCCA TTTTGTTCCCACTGT PAB1378 1458075 - 1457548 - | flagellin b2 precursor TERM 532 1458141 - 1458164 + r 79 -11.2 -2.58544 | opp_overlap 1458135 1458144, overlap 1458140 CCTGTAAAAGTTGAA CTACATATGT AGGT ACATATGTAG GTTATCGACATCAAA PAB1377 1459153 - 1458191 - | hypothetical protein PAB1376 1459490 - 1459164 - | hypothetical protein PAB0993 1459632 - 1460594 + | hypothetical protein PAB1374 1461337 - 1460582 - | hypothetical protein PAB7382 1461610 - 1461554 - | hypothetical protein PAB1373 1462448 - 1461636 - | hypothetical protein TERM 533 1462642 - 1462623 - R 73 -9.4 -3.15131 | overlap 1462622 TTTAAATAAAAACAT TCTTTTCG GCAT CGAAAAGA GCCTACGAAATCGAT ahcY 1464243 - 1462975 - | S-adenosyl-L-homocysteine hydrolase TERM 534 1464101 - 1464111 + g 74 -6.8 -4.35483 | GCGGCAATTCTAACC CCCT TGA AGGG TTTCTTCTCCTCGAA PAB1371 1465673 - 1464255 - | hypothetical protein TERM 535 1465088 - 1465074 - G 77 -7.2 -4.42788 | opp_overlap 1465076 TCCAAGGGCAGAAAA GATTTC AAC GAAATC TCTAGCTGGAATGTT PAB0997 1465763 - 1466416 + | hypothetical protein PAB0998 1466781 - 1467506 + | hypothetical protein PAB1370 1470033 - 1468870 - | hypothetical protein TERM 536 1469999 - 1469985 - G 70 -10 -3.05596 | CACCCCGGTAGTTAA CTACCG CCC CGGTAG TTAAAAACGTGACCT TERM 537 1470099 - 1470125 + H 100 -11.8 -5.03314 | opp_overlap 1470099 1470115, overlap 1470115 1470118 CATTAACCCCAAAAA CTTAACGAAAAT CAA GTTTTCGTTAAG TTTTTTAACCCTAAC TERM 538 1470125 - 1470099 - H 93 -11.1 -4.67904 | opp_overlap 1470099 1470115 1470118, overlap 1470115 CATTAACCCCAAAAA CTTAACGAAAA TCAAG TTTTCGTTAAG TTTTTTAACCCTAAC PAB1002 1470158 - 1471444 + | hypothetical protein PAB1369 1471783 - 1471445 - | tetracenomycin polyketide synthesis protein related PAB1368 1472517 - 1471792 - | hypothetical protein PAB1367 1472848 - 1472501 - | hypothetical protein PAB1366 1473824 - 1472832 - | hypothetical protein PAB1365 1474143 - 1473772 - | hypothetical protein PAB1364 1474508 - 1474155 - | prefoldin subunit beta PAB1363 1475472 - 1474558 - | hypothetical protein TERM 539 1474987 - 1474958 - G 70 -9.3 -3.40639 | AAGTCTATCAAGCAA CTCTCGGGAACCT TCAT AGGTTCTCCAGAG AAGAGCATCTCGTCG PAB1362 1476245 - 1475517 - | hypothetical protein PAB1361 1476920 - 1476297 - | hypothetical protein PAB1360 1477221 - 1476886 - | hypothetical protein PAB1359 1478374 - 1477301 - | hypothetical protein TERM 540 1478598 - 1478585 - g 74 -3.8 -4.93877 | opp_overlap 1478585 1478580, overlap 1478580 GGCCATGAAACAAAA CAGG CGCGTC CCTG TTTGGGTTATAGTTA rpl39e 1478526 - 1478681 + | 50S ribosomal protein L39e rpl31E 1478692 - 1478976 + | 50S ribosomal protein L31e eif-6 1479036 - 1479719 + | translation initiation factor IF-6 rplX 1479733 - 1479966 + | 50S ribosomal protein LX PAB1006 1479988 - 1480434 + | prefoldin subunit alpha PAB1357 1481628 - 1480435 - | translation-associated GTPase PAB1356 1482640 - 1481672 - | ABC transporter, periplasmic binding protein PAB1355 1484005 - 1482692 - | hypothetical protein moaB 1484593 - 1484084 - | molybdenum cofactor biosynthesis protein TERM 541 1485582 - 1485572 - g 72 -5.4 -4.49981 | opp_overlap 1485572 CAGAGCAGTAGAAAA CCTT CTA AAGG TGTTGAGGGGAGAGA PAB1008 1484664 - 1485665 + | 2-hydroxyacid dehydrogenase PAB2375 1485675 - 1486670 + | aminopeptidase PAB1010 1486684 - 1487445 + | hypothetical protein PAB1011 1487455 - 1488252 + | hypothetical protein PAB1012 1488234 - 1488827 + | hypothetical protein PAB1351 1489862 - 1488795 - | hypothetical protein PAB1013 1489931 - 1490872 + | hypothetical protein PAB1349 1493216 - 1490853 - | beta-galactosidase PAB1348 1494235 - 1493210 - | glutamine-fructose-6-phosphate transaminase related; cter region dppF 1495142 - 1494183 - | dipeptide ABC transporter, ATP-binding protein TERM 542 1494796 - 1494782 - GR 73 -8.6 -3.63627 | opp_overlap 1494764 1494782 TTTCGACATCGGAAA CGTTCT TCA AGAACG TTCTAAAGACAAGGT TERM 543 1494782 - 1494796 + gr 70 -8.6 -3.28791 | opp_overlap 1494782, overlap 1494764 TTTCGACATCGGAAA CGTTCT TCA AGAACG TTCTAAAGACAAGGT TERM 544 1494824 - 1494804 - GR 72 -8.3 -3.59247 | overlap 1494809 1494818 CAAGAACGTTCTAAA GACAAGGTC AAA GACCCTATC AACCTTATAGAGGGG dppD 1496110 - 1495142 - | dipeptide ABC transporter, ATP-binding protein PAB1345 1497041 - 1496112 - | ABC transporter dppB 1498036 - 1497044 - | dipeptide ABC transporter, permease protein (dppB) TERM 545 1497626 - 1497638 + g 81 -3.4 -5.38549 | opp_overlap 1497626 GAACACTGGCATTAA GTAC TTGTC GTAC TTTTTGTTCTTTCCA TERM 546 1498092 - 1498066 - R 78 -3.7 -5.28315 | gap 1, opp_overlap 1498071, overlap 1498071 ACAAAATTTAAAAAA GAAG-AGAGGAG CTAA CGCCTCTTCCTC CTTACCGCGACTAGT PAB1343 1499978 - 1498077 - | dipeptide transport protein precursor (dip eptide-binding protein) TERM 547 1499515 - 1499536 + g 70 -2.2 -5.0538 | overlap 1499517 CTGTAAAGCTGATTT CTCCAAGC CCAGAC GTTTGGTG TTTTTTCAAATACGA TERM 548 1501183 - 1501197 + G 74 -8.6 -3.93369 | opp_overlap 1501177 1501180 1501183 GCCAAAGTACAAGGA GTTACC CTT GGTAAC TTTCGTTGGAGTTGA bgal 1500164 - 1501615 + | beta-galactosidase PAB1019 1501834 - 1502283 + | hypothetical protein PAB1341 1503079 - 1502276 - | hypothetical protein PAB1020 1503192 - 1504340 + | hypothetical protein PAB1021 1504351 - 1505658 + | hypothetical protein PAB1338 1506655 - 1505633 - | hypothetical protein PAB1337 1507425 - 1506670 - | hypothetical protein tlpC 1509687 - 1507468 - | methyl-accepting chemotaxis protein PAB1335 1510195 - 1509704 - | chemoreceptor glutamine deamidase CheD PAB1334 1510817 - 1510179 - | chea histidine kinase PAB1333 1511458 - 1510814 - | chea histidine kinase related protein cheA 1513754 - 1511436 - | chemotaxis histidine kinase cheB 1514823 - 1513717 - | chemotaxis-specific methylesterase TERM 549 1514319 - 1514286 - GR 71 -9.5 -2.75535 | gap 1 GGAATATCTTAAGCA GCGACTGCGGCCCTCC TGT GGAGG-CCGCTATGGC AACAGCAATCCTAGC TERM 550 1514728 - 1514740 + gr 75 -7.7 -4.04752 | ACCGCATACTTCAAG CTCAG GAT CTGAG TTTATAATGTCCTTT cheY 1515196 - 1514834 - | chemotaxis response regulator cheR 1516032 - 1515181 - | chemotaxis protein methyltransferase PAB1026 1516336 - 1517460 + | methyl-accepting chemotaxis protein cheW 1517473 - 1517910 + | purine-binding chemotaxis protein TERM 551 1518943 - 1518925 - g 70 -5.3 -4.50943 | GAAGAACTTAGAAAA CTCGAAC AGCAA GTTCAAG AGTTAATAAACGCCC PAB1028 1517974 - 1519038 + | hypothetical protein PAB1029 1519091 - 1520035 + | Na+/Ca+ exchanging protein related PAB1030 1520048 - 1520722 + | hypothetical protein PAB1325 1521125 - 1520682 - | hypothetical protein PAB1324 1522021 - 1521122 - | stomatin-like protein PAB1031 1523047 - 1523418 + | hypothetical protein TERM 552 1523791 - 1523773 - g 71 -7.4 -3.8646 | CATGAACAAGTTAAA GCTGAAGT GGT ACTTCGGC CTGTACACGGCTTTA PAB1032 1523693 - 1524154 + | hypothetical protein TERM 553 1524452 - 1524468 + G 95 -12.3 -4.07885 | ATCGCCGAAGAGCTT GGCCTGA ACT TCAGGCC TTTTGAAGGAAACTC PAB1033 1524203 - 1524862 + | hypothetical protein TERM 554 1525211 - 1525224 + F 91 -8.1 -5.32944 | opp_overlap 1525210, overlap 1525199 CGTATCTGATGGAAT GCTCC GTCA GGAGC TTTTTTGATTGTGGC TERM 555 1525307 - 1525318 + F 76 -3.6 -5.20333 | GGCCTAAGTTTCTGA GTCC TCAC GGGC TTTTTCTTCTGAATG PAB1035 1525638 - 1527188 + | hypothetical protein TERM 556 1528193 - 1528179 - g 72 -5.6 -4.42653 | AGGCGAGCCAGAAAA CTGGCC GGA GCCCAG GATAATCTGCAGGTT PAB1036 1527250 - 1528272 + | hypothetical protein TERM 557 1528384 - 1528369 - g 76 -9 -3.71148 | opp_overlap 1528368 GAAAAGCGAGCTAAA TCCCCA TGGC TGGGGA GTTGGATGGTACCTG PAB1037 1528283 - 1528909 + | glucosamine synthetase TERM 558 1529086 - 1529071 - T 72 -3.2 -5.01546 | overlap 1529072 1529076 AAATTGACAGAAAAA TCAAGC CAAT GCTTGG TAGGGAAGCCATAGA PAB1320 1531450 - 1529945 - | thermostable carboxypeptidase PAB1319 1532096 - 1531530 - | hypothetical protein nusA 1532287 - 1532099 - | transcription elongation factor NusA PAB1318 1532857 - 1532297 - | nicotinamide-nucleotide adenylyltransferase PAB1317 1533624 - 1532854 - | hypothetical protein PAB1039 1533694 - 1535292 + | hypothetical protein PAB1040 1535297 - 1535893 + | tRNA 2'-O-methylase pgsA-like 1535829 - 1536389 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PAB1316 1537124 - 1536435 - | 2-haloalkanoic acid dehalogenase TERM 559 1536947 - 1536984 + g 83 -9.2 -4.35461 | gap 1, opp_overlap 1536946 1536947 TTATTGGCCTATAAG GCTTACCAGCGTACGCC GAGAA GGCTT-CTCTGGTAAGC TTTTCGTACTCTTCA PAB1315 1539124 - 1537163 - | glyceraldehyde-3-phosphate: ferredoxin oxidoreductase PAB1314 1540264 - 1539212 - | hyaluronan synthase related lon 1543461 - 1540465 - | ATP-dependent protease La TERM 560 1543111 - 1543133 + g 93 -9 -4.91109 | TTCTTCAACGATCCT CCTTCCCTGC CCC GCTGGGACGG TTTTTATCCTGGGCA TERM 561 1543230 - 1543210 - G 76 -9 -3.67597 | TTCCGTAGGTAATAA CTCGGCCA TGGCT TGGCCAAG CATCGACTTTCCGGT PAB1045 1543464 - 1543832 + | hypothetical protein PAB1312 1545176 - 1543815 - | DNA repair protein RAD25 TERM 562 1544283 - 1544304 + g 72 -8.7 -3.78934 | TCTGGCCTCTTCCAA GGCCCTCAA AGCT TTGAAGGCC TTATTGTCAACGCCC PAB1046 1545226 - 1546365 + | hypothetical protein PAB1311 1546927 - 1546355 - | hypothetical protein PAB1310 1547265 - 1546924 - | hypothetical protein PAB1309 1548481 - 1547297 - | hypothetical protein PAB1047 1548721 - 1549383 + | O-sialoglycoprotein endopeptidase, putative PAB1308 1550680 - 1549373 - | methyl-accepting chemotaxis related protein PAB1307 1552438 - 1550726 - | DNA mismatch recognition protein MutS TERM 563 1551823 - 1551839 + g 80 -6.6 -4.73635 | TGCCACTTAGGGTCA GCTTGA ACCTC TCAAGC TTTTCTTCGATTCTC TERM 564 1552163 - 1552135 - G 83 -13.9 -2.69151 | opp_overlap 1552134 1552133 1552141, overlap 1552132 GCTCCGTAGAGACCA TGCAGAGGCCAAG CTT CTCGGCCTCTTCA ACTTCGTCCTCGCTA PAB1306 1553265 - 1552435 - | translation initiation factor IF-2B subunit alpha PAB1305 1554025 - 1553267 - | competence damage-inducible protein A PAB1050 1554087 - 1554866 + | lysophospholipase PAB1303 1555882 - 1554863 - | adenylosuccinate synthetase TERM 565 1555763 - 1555750 - G 88 -8.1 -4.82901 | opp_overlap 1555750 TCCCGTTTATAAAAA CGCTG TGCC CAGCG TTCGTTCCGACACCG PAB1302 1556967 - 1555945 - | sua5 related protein PAB1301 1557965 - 1556973 - | LPS biosynthesis rfbu related protein PAB1300 1559857 - 1557962 - | acyl-peptide hydrolase PAB1299 1560807 - 1559854 - | UDP-glucose 4-epimerase (galE-2) graD-1 1560920 - 1561918 + | glucose-1-phosphate thymidylyltransferase PAB1297 1563728 - 1562493 - | hypothetical protein TERM 566 1562565 - 1562580 + g 72 -6.2 -4.23892 | opp_overlap 1562559 TGGAACCAAGGAACT GAACTT TTTC AAGTTC TTTTCCCTCATTACG TERM 567 1563431 - 1563445 + g 72 -2.8 -5.03747 | opp_overlap 1563405 CCTTTCCAAGAACGG GAATAG TAA CTATCC TTTTTTCACCCCTTT PAB1296 1564654 - 1563725 - | methanol dehydrogenase regulatory protein (moxR-2) PAB1295 1565669 - 1564641 - | hypothetical protein PAB1294 1567453 - 1565666 - | hypothetical protein TERM 568 1565900 - 1565921 + g 70 -10.1 -3.09742 | overlap 1565899 1565916 CCTGTACCACTCCCT CACCCCCAG ACTC CTGGGAGTG CTTTCCTTCTTTATG PAB1054 1567512 - 1568273 + | hypothetical protein TERM 569 1568868 - 1568854 - g 72 -5.6 -4.44461 | AAGAACGCTATAAAA CCCTGG ATT CCATGG ATAACGATTGAAAGG PAB1055 1568503 - 1569489 + | hypothetical protein PAB1056 1569500 - 1570288 + | hypopthetical 4-nitrophenylphosphatase TERM 570 1570398 - 1570418 + F 87 -8.3 -4.62203 | overlap 1570399 GGTCAAAATCATTAG GCGCTGTAA ATA TTACAGCGA TTTTACTTATTTAAA TERM 571 1570399 - 1570417 + F 86 -11.8 -3.36237 | overlap 1570398 GTCAAAATCATTAGG CGCTGTAA ATA TTACAGCG ATTTTACTTATTTAA TERM 572 1572185 - 1572169 - g 73 -2.1 -5.26247 | TGAAAAGAAAGAAAA GCTTGAG ATT CTCCTGC ACAAACACAATGGAG TERM 573 1572430 - 1572416 - g 70 -5 -4.47217 | AACGATGAAGTAAAA GAAATG CTC CATCTC ATTGAAAGTCTTGAA TERM 574 1573433 - 1573421 - g 72 -5.5 -4.40358 | opp_overlap 1573421 AGGGAGTTCATAAAA GAAGC TCA GCTCC TATTCCTAGCACTAG TERM 575 1573526 - 1573500 - g 72 -3 -5.011 | overlap 1573501 ATCCAAATAACAAAA CTGTTTACACCC TGA GAGTCCAAACAA GGGACATGAAAATTA nrd 1570457 - 1576825 + | ribonucleotide-diphosphate reductase alpha subunit glnA 1578480 - 1577161 - | glutamine synthetase PAB1291 1579324 - 1578914 - | hypothetical protein PAB1290 1580937 - 1579324 - | hypothetical protein TERM 576 1579936 - 1579948 + g 72 -4.8 -4.57569 | GTTAAAGAGTATCCT CACG TTAAC CGTG TTTTTACCAGGATAG bchP-like 1581028 - 1582140 + | geranylgeranyl hydrogenase related PAB1060 1582152 - 1582487 + | hypothetical protein PAB1061 1582484 - 1583647 + | hypothetical protein PAB1062 1583647 - 1584039 + | hypothetical protein PAB1063 1584032 - 1585261 + | hypothetical protein PAB1064 1585330 - 1586049 + | hypothetical protein PAB1288 1586920 - 1586033 - | GlcNAc-1-p transferase PAB1287 1587449 - 1586910 - | hypothetical protein PAB1286 1587757 - 1587446 - | hypothetical protein PAB1065 1587807 - 1588367 + | GTP-binding protein Era related PAB1285 1588883 - 1588368 - | hypothetical protein PAB1284 1591098 - 1588876 - | hypothetical protein PAB1283 1592102 - 1591104 - | hypothetical protein PAB1282 1592699 - 1592124 - | hypothetical protein PAB1281 1593856 - 1592816 - | hypothetical protein PAB1280 1594473 - 1593850 - | hypothetical protein TERM 577 1594678 - 1594698 + Gr 83 -7.5 -4.66163 | AAGGAGATAGACAGG GTGGAGGGG GTA CTACTCCAC TTTTTCGATCCGCCT PAB1279 1596207 - 1594999 - | hypothetical protein PAB1069 1594513 - 1595052 + | hypothetical protein TERM 578 1595407 - 1595454 + gT 76 -7.2 -4.25566 | gap 1, opp_overlap 1595418 1595420 1595421 1595443, overlap 1595436 GTACGCTATGTCACC GTTCACTAGAATATTCTCAACGT AAA ACGTTGA-AATGTTCATGAGAAC TTTTCCATCCTTGTT PAB1278 1597129 - 1596251 - | hypothetical protein PAB1277 1598250 - 1597066 - | X-prolyl dipeptidyl aminopeptidase TERM 579 1597616 - 1597628 + gr 70 -9.1 -3.19246 | opp_overlap 1597612 1597616 TTAACCAGCAACTTA CCGCT CCT AGCGG TTGCCTTCCAGTTGA moxR-1 1599206 - 1598253 - | methanol dehydrogenase regulatory protein PAB1275 1600152 - 1599199 - | hypothetical protein PAB1274 1603123 - 1600130 - | hypothetical protein TERM 580 1600664 - 1600642 - G 80 -7 -4.57353 | overlap 1600650 GCTCATGAGATAAAA CGAGAATATC GAT GTTATCCTCG AGAAAGAAGTCACCC PAB1273 1604214 - 1603120 - | hypothetical protein TERM 581 1603773 - 1603790 + g 76 -4.9 -4.90778 | gap 1 GCACAAAGTCCCTCA GGTTCTCA ACG TG-GAACC TTTTCTTTGCCTCCG purP 1605398 - 1604256 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein purD 1606728 - 1605412 - | phosphoribosylamine--glycine ligase TERM 582 1606611 - 1606627 + g 73 -2.2 -5.20783 | CGTAGTCCCTTGATA TCCTAG CAAGC CCAGGA TTTTTATGTTTGGAT TERM 583 1607171 - 1607145 - g 70 -2.3 -4.9755 | opp_overlap 1607147, overlap 1607147 AGATAGAACGAAAAA GACCTGGAA TCCATATAC TTCCAGGTT ATATGGATGACATGA PAB1075 1606871 - 1607548 + | hypothetical protein PAB1076 1607552 - 1608322 + | hypothetical protein TERM 584 1608874 - 1608861 - g 81 -5.3 -5.21236 | AAGGTAGAAGAAAAA TCCAA AAAG TTGGA AGAGCTAGGATGGAG purE 1608384 - 1608908 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purT 1610194 - 1608905 - | phosphoribosylglycinamide formyltransferase 2 PAB1079 1610398 - 1610703 + | hypothetical protein PAB1080 1610741 - 1611280 + | hypothetical protein PAB1265 1614997 - 1614554 - | hypothetical protein PAB1264 1615577 - 1615044 - | hypothetical protein PAB1263 1618400 - 1616124 - | hypothetical protein PAB1262 1620798 - 1618381 - | hypothetical protein TERM 585 1621456 - 1621468 + r 74 -4.9 -4.79174 | ATATCGGGTATCTCA TTGAA TAT TTCAA TTTTATTACTTAAAT PAB1260 1622949 - 1621510 - | hypothetical protein PAB1258 1624901 - 1622946 - | hypothetical protein TERM 586 1624143 - 1624156 + g 76 -2.3 -5.31855 | opp_overlap 1624144, overlap 1624144 CATCCTTAAAATATC AGACG GAGA CGTCA TTTTTCTTATTCCTC PAB1257 1628302 - 1624898 - | hypothetical protein TERM 587 1625670 - 1625682 + g 72 -6.3 -4.30987 | GTTTCACTTTTACGT GAGAA CTG TTCTC TTTCTTCTAGGGCCT TERM 588 1626491 - 1626507 + g 78 -5.9 -4.83759 | overlap 1626503 1626504 TATATCATTTGATAC TTGAACG AAG TGTTCAA TTTTTGAGTTTAGTT PAB1256 1629175 - 1628312 - | hypothetical protein purM 1629553 - 1630557 + | phosphoribosylaminoimidazole synthetase valS 1633229 - 1630554 - | valyl-tRNA synthetase fabG 1633406 - 1634128 + | 3-oxoacyl-[acyl-carrier-protein] reductase PAB1253 1635989 - 1634133 - | phosphoenolpyruvate carboxykinase TERM 589 1636138 - 1636121 - H 75 -9.9 -3.38281 | opp_overlap 1636117 1636116, overlap 1636116 TTATTCAAAAGCTAA TGGGACA TATG TGTCCCA AAAGGTTTAAATTTG PAB1087 1636183 - 1636713 + | dTDP-4-keto-l-rhamnose reductase related PAB1252 1640350 - 1636736 - | fragment pyrolysin related PAB1251 1641337 - 1640507 - | hypothetical protein PAB1250 1642862 - 1641405 - | inositol-5-monophosphate dehydrogenase PAB1089 1642975 - 1643568 + | hypothetical protein PAB7421 1643827 - 1643552 - | acylphosphatase (acyP) PAB1249 1644500 - 1643859 - | hypothetical protein PAB1090 1644587 - 1644901 + | hypothetical protein PAB1091 1644982 - 1646436 + | hypothetical protein napA-3 1647575 - 1646433 - | Na+/H+ antiporter PAB1092 1647654 - 1648565 + | hypothetical protein TERM 590 1648600 - 1648578 - g 81 -4.8 -5.1485 | opp_overlap 1648575 1648578 TAATGAAGATAAAAA CCGTATTTCC AAA GGAAAGAAGG TTATTTCTATATATT PAB1093 1648565 - 1649056 + | hypothetical protein PAB1246 1650400 - 1649057 - | hypothetical protein PAB1094 1650436 - 1650867 + | hypothetical protein PAB1095 1650864 - 1653134 + | hypothetical protein TERM 591 1653583 - 1653561 - g 74 -5.6 -4.64464 | overlap 1653580 GAAATTAAAGGAAAA GACGTCTTTG AAA CAAAGATATC CCAGGATAGTGAGAT PAB1096 1653291 - 1653746 + | hypothetical protein alaS 1656487 - 1653743 - | alanyl-tRNA synthetase PAB7424 1656800 - 1656522 - | hypothetical protein TERM 592 1657065 - 1657088 + G 70 -5.3 -4.4767 | overlap 1657068 AGGTTTATTCTTGAC GTTTCTGGA GTCAAA TCCAGATAC TTTTCTCGTCGCTGA PAB1098 1656910 - 1657428 + | N-terminal acetyltransferase endA 1657425 - 1657937 + | tRNA-splicing endonuclease subunit alpha PAB1244 1659223 - 1658027 - | 2-amino-3-ketobutyrate coenzyme A ligase hisS 1659389 - 1660684 + | histidyl-tRNA synthetase PAB1243 1661316 - 1660771 - | hypothetical protein TERM 593 1661003 - 1661026 + g 71 -7.5 -3.85698 | opp_overlap 1661024, overlap 1661006 TTCTCATAGAACGCC GAGCTTCTC CATTCT GAGAAGTTC TTTGTCGCAACAAAG TERM 594 1661346 - 1661327 - H 93 -10.8 -4.67635 | TCCAAAATTATAAAA CTTTCGGA AAAT TCCGAAAG AAGGGTGAGATTATG TERM 595 1661599 - 1661583 - g 72 -6.6 -4.21773 | opp_overlap 1661582 1661586 CGTGAAGATAAAGAA CAACGA TAACG TCGTTG ATATTAGGGACCCAA PAB1101 1661359 - 1663599 + | transport protein TERM 596 1663713 - 1663701 - g 76 -7.7 -4.31293 | opp_overlap 1663701 GGATACATGAACAAA GGAGA TTA TCTCC TCGTTGGCCCCCTAA TERM 597 1666231 - 1666217 - g 74 -8.6 -3.93578 | overlap 1666230 TGAAAGTAAAGAGAA GCTAAG GAA CTTAGC CATTGGAGCTGGCAT PAB1102 1663596 - 1666295 + | hypothetical protein PAB1241 1667433 - 1666279 - | hypothetical protein PAB1240 1667716 - 1667408 - | hypothetical protein TERM 598 1667741 - 1667723 - H 71 -6.8 -4.02334 | overlap 1667731 CACGGACATTAGAAA TCACCAAA TGC TTTAGTGA GCAGAGGTTATTTAA PAB1103 1667811 - 1668656 + | endonuclease IV-like protein ppa 1668721 - 1669257 + | inorganic pyrophosphatase rpoE1 1669294 - 1669860 + | DNA-directed RNA polymerase subunit E' rpoE2 1669857 - 1670042 + | DNA-directed RNA polymerase subunit E'' PAB1106 1670042 - 1670581 + | hypothetical protein rps24e 1670571 - 1670870 + | 30S ribosomal protein S24e PAB1107 1671598 - 1672875 + | transport protein PAB1108 1672872 - 1673321 + | hypothetical protein PAB1237 1674508 - 1673318 - | hypothetical protein PAB1236 1675034 - 1674582 - | transcriptional regulator PAB1235 1675624 - 1675073 - | ham1 protein related TERM 599 1675114 - 1675104 - G 75 -3.2 -5.16572 | AGCCAATCGAAAAAA GCCT TTA AAGC TTTTCCTCTATGAGA TERM 600 1675144 - 1675167 + g 72 -3.1 -5.01732 | opp_overlap 1675166, overlap 1675166 ATAAAGAATTCTTCT CCTCTGTTG TCATTT CAGCAAAGG TTTTTTCAGAACCTT PAB1234 1676123 - 1675635 - | hypothetical protein PAB1110 1676180 - 1677103 + | hypothetical protein PAB1233 1677412 - 1677104 - | hypothetical protein TERM 601 1678262 - 1678239 - g 74 -10.4 -3.22777 | gap 1, opp_overlap 1678239, overlap 1678237 GGCTATAGATCAAGA TCCCTACTGGA GAC TCCAG-AGGGA TTTCGCAGAGAGCTT TERM 602 1678239 - 1678262 + G 79 -10.4 -3.53343 | gap 1, opp_overlap 1678239 1678237 GGCTATAGATCAAGA TCCCTACTGGA GAC TCCAG-AGGGA TTTCGCAGAGAGCTT trpS 1677586 - 1678743 + | tryptophanyl-tRNA synthetase PAB1112 1678765 - 1679124 + | hypothetical protein PAB1113 1679175 - 1679534 + | hypothetical protein prsA 1679540 - 1680388 + | ribose-phosphate pyrophosphokinase TERM 603 1680767 - 1680757 - g 79 -3.2 -5.31091 | TATAAGAAAACAAAA GCTA ATG CAGC ACTCGTTGTCAAGAA graD-2 1680385 - 1681644 + | glucose-1-phosphate thymidylyltransferase TERM 604 1682355 - 1682316 - g 81 -3.6 -5.38497 | overlap 1682317 1682320 ACCGAAAGTAAAAAA GGAGCATTGGAGTTGATT TCCC AATCAAATCCAGTGATCA TAACCAGAAGAAATC PAB1116 1681641 - 1682702 + | hypothetical protein PAB1230 1684099 - 1682699 - | succinyl-coa synthetase alpha subunit related protein PAB1229 1684704 - 1684150 - | ArsR family transcriptional regulator PAB1228 1685017 - 1684709 - | hypothetical protein PAB1227 1685597 - 1685019 - | transcriptional regulatory protein, putative PAB1226 1686265 - 1685786 - | ribosomal protein s18 alanine acetyltransf erase related protein PAB1118 1686294 - 1686908 + | hypothetical protein PAB1225 1687701 - 1686895 - | hypothetical protein PAB1224 1688492 - 1687842 - | hypothetical protein PAB1223 1689229 - 1688486 - | hypothetical protein TERM 605 1688842 - 1688852 + g 85 -6.8 -4.98857 | opp_overlap 1688821 CCTCATTGTAGGCCT GCCA TAG TGGC TTTTTCTCCTTCCCT TERM 606 1688888 - 1688876 - G 70 -9.1 -3.33696 | CTTCCCTTTAAGGAA CTCCC AAA GGGAG TCATAAAATACCGTC hps 1690489 - 1689269 - | D-arabino 3-hexulose 6-phosphate formaldehyde lyase PAB1123 1690553 - 1691026 + | 6-pyruvoyl tetrahydrobiopterin synthase related protein rps27e 1691216 - 1691001 - | 30S ribosomal protein S27e rpl44e 1691487 - 1691203 - | 50S ribosomal protein L44e maf 1691611 - 1692174 + | Maf-like protein eno 1692210 - 1693502 + | phosphopyruvate hydratase PAB1127 1693538 - 1694266 + | hypothetical protein PAB1219 1695075 - 1694263 - | metal dependent hydrolase polI 1695183 - 1697498 + | DNA polymerase I PAB1217 1698243 - 1697500 - | hypothetical protein PAB1216 1698781 - 1698371 - | hypothetical protein PAB1216.1n 1699062 - 1698778 - | hypothetical protein PAB1215 1700888 - 1699119 - | hypothetical protein TERM 607 1700145 - 1700158 + g 70 -9.5 -3.08947 | overlap 1700142 TATTTGCCTCTCGAA GGCCC AATC GGGCC TAGTTTCTATAGTTA PAB1130 1700991 - 1701632 + | hypothetical protein nadC-like 1701674 - 1702846 + | nicotinate phosphoribosyltransferase TERM 608 1702867 - 1702853 - T 70 -3.5 -4.94168 | ATAGAATAAAAGAAA GGAGA TCAGG CCTCC TCAATGGTAATAGCA fdxA 1703061 - 1702858 - | ferredoxin PAB1214 1704594 - 1703167 - | putative oxidoreductase PAB1213 1705464 - 1704595 - | ferredoxin--NADP(+) reductase subunit alpha TERM 609 1705843 - 1705831 - g 83 -6.3 -5.08169 | AGATAGCGGAAAAAA GGTAA TAG TTACC GGCTGCCTCCCTCAC PAB1134 1705622 - 1706899 + | hypothetical protein PAB1135 1706997 - 1707461 + | hypothetical protein PAB1136 1707440 - 1708078 + | ribonuclease P protein component 3 TERM 610 1708419 - 1708400 - g 73 -8 -4.15703 | opp_overlap 1708397 GTTGATAAAGAAGAA GTTAATCT AGCT AGATTAAC AACTTCATGCCTCAG TERM 611 1708427 - 1708447 + G 71 -7.6 -3.89215 | AGATTAACAACTTCA TGCCTCAG CGTTA TTGAGGCA TTTACATTTCTCAAC TERM 612 1708503 - 1708484 - g 71 -3.6 -4.85599 | overlap 1708486 GGTAGCCTAGAAAAA TATGCAAA AGAA TTTGCAAA AATGTTTGAAGACTT PAB1137 1708115 - 1709314 + | hypothetical protein PAB1210 1710463 - 1709315 - | dolichyl-phosphate mannoosyltransferase related protein PAB1138 1710629 - 1711654 + | NADH-dependent dyhydrogenase related protein PAB1139 1711656 - 1712663 + | NADH-dependent dyhydrogenase related protein PAB1208 1713346 - 1712660 - | triosephosphate isomerase PAB1207 1714015 - 1713383 - | phosphoserine phosphatase (serB) pcm 1714662 - 1714003 - | protein-L-isoaspartate O-methyltransferase PAB1205 1715266 - 1714640 - | methyltransferase related protein PAB1143 1715351 - 1716964 + | hypothetical protein PAB1144 1716985 - 1718439 + | hypothetical protein purL 1720545 - 1718428 - | phosphoribosylformylglycinamidine synthase II purQ 1721660 - 1720989 - | phosphoribosylformylglycinamidine synthase subunit I PAB3433 1721916 - 1721662 - | phosphoribosylformylglycinamidine synthase subunit PurS PAB1199 1722548 - 1721970 - | glucose-6-phosphate isomerase PAB1198 1723035 - 1722502 - | hypothetical protein PAB1197 1724055 - 1723048 - | oligopeptide transport atp-binding protein PAB1196 1725024 - 1724065 - | oligopeptide transport atp-binding protein appC 1726467 - 1725034 - | oligopeptide ABC transporter, permease protein TERM 613 1725110 - 1725094 - G 73 -9.5 -3.46509 | overlap 1725088 TCCCAATAACACGAA CGTTAGT GAT ACTAACG CTATCGCAAGCCCTG PAB1194 1727551 - 1726490 - | oligopeptide transport permease protein appb PAB1193 1730533 - 1727738 - | hypothetical protein pyrC 1730820 - 1732034 + | dihydroorotase pyrD-like 1732012 - 1732755 + | dihydroorotate dehydrogenase electron transfer subunit act-1 1732760 - 1733668 + | pyruvate formate-lyase activating protein PAB1152 1733683 - 1734507 + | hypothetical protein PAB1190 1735711 - 1734494 - | alanyl-tRNA synthetase related protein (fragment) PAB1189 1736462 - 1735686 - | sy v-atpase proteolipid PAB1188 1737248 - 1736469 - | CDP-abequose synthase atpD 1737941 - 1737297 - | V-type ATP synthase subunit D atpB 1739362 - 1737965 - | V-type ATP synthase subunit B atpA 1742412 - 1739359 - | V-type ATP synthase subunit A TERM 614 1741864 - 1741877 + g 71 -3.8 -4.75174 | CTTGAGCTCCTTTAT CTCC CCACTT GGAG TTTTTACCTTCGCTA atpF 1742730 - 1742419 - | V-type ATP synthase subunit F atpC 1743839 - 1742727 - | V-type ATP synthase subunit C TERM 615 1742884 - 1742903 + g 72 -5 -4.63486 | overlap 1742886 AACTGAGATAGCTCT TTCATCCT TCTG AGGATGTA TTTTCTTAAAGCGAT TERM 616 1742886 - 1742901 + g 71 -7.6 -3.93367 | overlap 1742884 CTGAGATAGCTCTTT CATCCT TCTG AGGATG TATTTTCTTAAAGCG TERM 617 1743301 - 1743334 + g 83 -8.9 -4.23647 | AGCCTCCTCAGAGGT TCCTCGTAGTCCGTG CCCT CAAGGATTACGAGCA TTTCTTCCATAGTTT atpE 1744441 - 1743842 - | V-type ATP synthase subunit E TERM 618 1744030 - 1744053 + g 79 -8.8 -4.08651 | overlap 1744031 CCCTTATCTCCTCTA TCCTCGAGCT TATT AGCGCGAGGG TTCTTTCATTAGAGT TERM 619 1744031 - 1744052 + g 70 -10.1 -3.04468 | overlap 1744030 CCTTATCTCCTCTAT CCTCGAGCT TATT AGCGCGAGG GTTCTTTCATTAGAG PAB1181 1744949 - 1744473 - | V-type ATP synthase subunit K atpI 1746933 - 1744954 - | V-type ATP synthase subunit I TERM 620 1745058 - 1745044 - G 78 -6.4 -4.58685 | AAACGTTCCGAAAAA CTCCAC ATA GTGAAG ACGGAGAGCGTGAAC PAB1179 1747261 - 1746935 - | V-type ATP synthase subunit H trkA 1748032 - 1747349 - | TRK potassium uptake system protein secD 1749560 - 1748037 - | preprotein translocase subunit SecD TERM 621 1748876 - 1748890 + g 72 -8.6 -3.73402 | CTTTCTCACTACCTT TCGCTA TCT TAGCGA TTTCCTGGGCCGTCT PAB1176 1750483 - 1749557 - | preprotein translocase subunit SecF TERM 622 1749700 - 1749676 - G 86 -11.5 -3.76482 | CTATATCATCAATAA CCTTGGCCGTT GAG AACAGCCAAAG CGATATTAAGGCCCC gcp 1750562 - 1751536 + | O-sialoglycoprotein endopeptidase PAB1160 1751530 - 1752258 + | hypothetical protein PAB1174 1753257 - 1752250 - | hypothetical protein TERM 623 1752564 - 1752584 + g 75 -6.1 -4.5442 | opp_overlap 1752564 GGACAAATGAATACA GGAGAGTTG AAG CGAGTCTCC TTTTCTCCTTGGCCA PAB1173 1754417 - 1753260 - | proliferating-cell nucleolar antigen P120, putative PAB1162 1754773 - 1755192 + | S-adenosylmethionine decarboxylase proenzyme PAB1163 1755167 - 1755874 + | hypothetical protein PAB1172 1757491 - 1755983 - | glycine dehydrogenase subunit 2 PAB1171 1758841 - 1757492 - | glycine dehydrogenase subunit 1 PAB1170 1759564 - 1758902 - | hypothetical protein TERM 624 1760236 - 1760225 - H 71 -7.2 -3.8802 | overlap 1760226 AAAATAGAATTGAAA GGCC GAAA GGCC GGCGCTGAGGATCTG dcd 1762045 - 1762509 + | deoxycytidine triphosphate deaminase PAB1169 1763058 - 1762495 - | hypothetical protein TERM 625 1762918 - 1762931 + g 70 -2.4 -4.95547 | TGTTGTACCCCTCAA GGAT TCTATT ATCC TTTTGTTCTTCTCCC TERM 626 1763136 - 1763153 + r 72 -9.1 -3.26947 | opp_overlap 1763129 TCCGAAGAGAGCGCT GAGGCCT GCGA GGGCCTC TTCCTCTGAAACTTC rpl12p 1763441 - 1763118 - | 50S ribosomal protein L12P TERM 627 1763362 - 1763388 + g 76 -8.1 -4.17516 | gap 1, opp_overlap 1763369, overlap 1763360 1763366 TCAACTCCAGCCGCC TGAAGGACAGCC TTAA GGTTGTCC-TCA TTTATCTCCTTTCCA TERM 628 1763366 - 1763385 + g 70 -10 -3.0955 | opp_overlap 1763369, overlap 1763360 1763362 CTCCAGCCGCCTGAA GGACAGCC TTAA GGTTGTCC TCATTTATCTCCTTT rplP0 1764508 - 1763483 - | acidic ribosomal protein P0 TERM 629 1763531 - 1763513 - G 79 -11.7 -3.1634 | opp_overlap 1763510 1763513 1763526 GCTCAAACCAGCCAA GGCCTCC TCCTC GGAGGCC TCCTCTTCTTCCTCT TERM 630 1763513 - 1763531 + g 77 -11.7 -2.87405 | opp_overlap 1763513, overlap 1763510 1763526 GCTCAAACCAGCCAA GGCCTCC TCCTC GGAGGCC TCCTCTTCTTCCTCT SEQUENCE gi|10954552|ref|NC_001773.1| Pyrococcus abyssi GE5 plasmid pGT5, complete sequence (length 3444) pGT5_01 103 - 2067 + | replication initiator protein pGT5_02 2230 - 3423 + | hypothetical protein