TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.357703 %AT, 5975260 nt, 51282 terms. Intergenic: 0.409269 %AT, H2T: 583400 nt, 5392 terms; T2T: 170012 nt, 3403 terms; H2H: 269880 nt, 4622 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|94152343|ref|NC_007971.1| Ralstonia metallidurans CH34 plasmid 1, complete sequence (length 233720) Rmet_5942 28 - 861 + | ATPase Rmet_5943 915 - 1130 + | hypothetical protein TERM 1 1139 - 1161 + T 90 -19.2 -3.07816 | opp_overlap 1139 1142, overlap 1142 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 2 1161 - 1139 - T 91 -19.2 -3.18264 | opp_overlap 1139 1142, overlap 1142 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 3 1142 - 1158 + T 90 -15.1 -3.68569 | opp_overlap 1139 1142, overlap 1139 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC TERM 4 1158 - 1142 - T 93 -15.1 -3.73647 | opp_overlap 1142 1139, overlap 1139 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC Rmet_5944 2210 - 1272 - | major facilitator transporter Rmet_5945 4326 - 2398 - | iron permease FTR1 Rmet_5946 4885 - 4448 - | MerR family transcriptional regulator Rmet_5947 4972 - 7371 + | heavy metal translocating P-type ATPase TERM 5 8044 - 8075 + G 74 -2.3 -4.76312 | gap 1, overlap 8046 TCATCTCACAGCTCT TTGGGT-ATGGCGA GCAAG TCGGCATTACCCCA TTTTTCAATCTTGTG Rmet_5948 7368 - 8444 + | signal peptidase II TERM 6 9216 - 9231 + G 77 -9 -4.3208 | CAGAGAGCCAGTGCG CGTCGT TCGA ACGACG TTTTCCATTCTCACG Rmet_5949 8612 - 9481 + | hypothetical protein Rmet_5950 10000 - 9587 - | phage integrase TERM 7 10332 - 10389 + G 75 -9.2 -3.95073 | gap 3, opp_overlap 10326, overlap 10333 TCCCAAGGAGCGCGC CCTGATCGACGCACGGCGCA-GCCAGCTG TAC CGGCTGGCCTGCGCCGTCCA-C-ATCGGC TTTGTGCGTATGACG TERM 8 10333 - 10388 + G 71 -12.7 -2.96722 | gap 3, opp_overlap 10326, overlap 10332 CCCAAGGAGCGCGCC CTGATCGACGCACGGCGCA-GCCAGCTG TAC CGGCTGGCCTGCGCCGTCCA-C-ATCGG CTTTGTGCGTATGAC Rmet_5951 10228 - 12144 + | transposase Tn3 TERM 9 12880 - 12870 - g 72 -3.2 -4.68593 | TCCACTATGGAAAAA TCCC CTT GGAA CTAGCTCGGCACGAT Rmet_5952 12170 - 13168 + | transposase Tn3 Rmet_5953 13588 - 13325 - | putative signal peptide protein Rmet_5954 13673 - 14683 + | integrase catalytic subunit Rmet_5955 14858 - 14754 - | phage integrase Rmet_5956 15052 - 14906 - | ISPpu14, transposase Orf3 Rmet_5957 16288 - 15107 - | transposase IS66 Rmet_5958 16669 - 16454 - | hypothetical protein Rmet_5959 17597 - 17076 - | phage integrase TERM 10 17728 - 17699 - R 81 -16.5 -2.94099 | overlap 17714 17725 GTTGGCCAGTACATA GCGCTGTTCCACC AACC AGCGGAACAGCGC GCTGAGCACGGTCAG Rmet_5960 18114 - 17740 - | hypothetical protein Rmet_5961 19388 - 19053 - | hypothetical protein Rmet_5962 21276 - 19591 - | glycosyl transferase family protein Rmet_5963 22241 - 21996 - | hypothetical protein Rmet_5964 22352 - 22678 + | transposase IS3/IS911 TERM 11 22855 - 22867 + T 88 -6.9 -5.00884 | overlap 22856 AGGCAAACCGACGAT TGGGG TTA CCCCG TTTTTTCGGACAGAT Rmet_5965 23174 - 22896 - | hypothetical protein TERM 12 23639 - 23616 - H 74 -12.4 -3.1739 | AGAGCATTTGACCAA GCGCGGTAGC AGTG GCCACCGCAC ACCTGGACGGGCAGT TERM 13 24439 - 24455 + G 78 -13.7 -3.19425 | overlap 24429 TCCTGGCCGTTGGTG CGGCAGG CGT CCTGCCG TTCATGGGCTTGATT TERM 14 24906 - 24923 + G 74 -12.7 -3.17763 | overlap 24892 TCGCTGGCGACGCTG GCCAGCC TTCA GGCTGGC TTGATGGCGTCTCGG Rmet_5966 23676 - 25283 + | glycosyl transferase family protein TERM 15 25374 - 25418 + G 89 -16.4 -3.2963 | CGCTGGTCGGTTTCG GGGTTGCAGCGCTACCGGCG TCTGC CGCCGGCAGTGTTGCAGGCC TTCTGACGCACTACT Rmet_5967 25280 - 25663 + | GtrA-like protein Rmet_5968 25660 - 26781 + | glycosyl transferase family protein Rmet_5969 27014 - 27316 + | hypothetical protein Rmet_5970 29863 - 27374 - | heavy metal translocating P-type ATPase TERM 16 27672 - 27718 + g 84 -12.9 -3.75153 | gap 1, overlap 27668 27673 ATGCCCACCGTGGCG TTGGCCATTGCCGGCG-CGTCG TTGA CGCCGTCGCCGACCATGGCCAC TTTGGCTTCCGCGCG TERM 17 27673 - 27717 + g 84 -16.4 -2.84878 | gap 1, overlap 27668 27672 TGCCCACCGTGGCGT TGGCCATTGCCGGCG-CGTCG TTGA CGCCGTCGCCGACCATGGCCA CTTTGGCTTCCGCGC Rmet_5971 30785 - 30363 - | flagellar basal-body rod protein FlgB Rmet_5972 31070 - 31366 + | transposase IS3/IS911 Rmet_5973 31363 - 32256 + | integrase catalytic subunit Rmet_5974 32373 - 33440 + | porin TERM 18 33488 - 33507 + F 100 -13.6 -5.60993 | ATTCAAGAGAGTTTG TGCCTCCC AACC GGGAGGCA TTTTTTTATGACAGG Rmet_5975 33623 - 33901 + | hypothetical protein TERM 19 33941 - 33969 + T 72 -11 -3.3062 | overlap 33938 33936 33966 CCGACCTCTGTGGGG GAGCCAGGCACC CGTCA GTTGCTTGGCTC TTGGTGCTCTTTCGC TERM 20 34012 - 34035 + T 100 -16.8 -5.47821 | opp_overlap 34003 GCGAAAGCTTCCGAA GCTTGCCCTC CCCG GAGGGCAAGC TTTTTTTCCCTCCAT TERM 21 34155 - 34175 + T 86 -18.3 -2.90571 | opp_overlap 34155 AATGACGATGAAAAA GGCCCCGCA TTG TGCGGGGCC TGTAGTTCACCGGTT TERM 22 34175 - 34155 - T 100 -18.3 -4.7871 | opp_overlap 34155 AATGACGATGAAAAA GGCCCCGCA TTG TGCGGGGCC TGTAGTTCACCGGTT Rmet_5976 34601 - 34200 - | hypothetical protein Rmet_5977 36140 - 34710 - | heavy metal sensor signal transduction histidine kinase TERM 23 35020 - 35002 - G 71 -10.2 -3.67775 | ATGTCGATGCAACAA TGTGCCGC TTC GCGGCGCA CCACCAGATCTATCA TERM 24 35859 - 35846 - G 83 -5.9 -4.86731 | overlap 35848 CCGTGCGAAACAAAA GCCGG CCAT CCAGC GCCGTGACGCGAACG TERM 25 35964 - 35978 + g 73 -5.7 -4.35524 | opp_overlap 35963 CTCGCGCAAGAAATG CTCGA CCTGT TCGAG TTTTCCCTTTACAAC Rmet_5978 36822 - 36145 - | two component heavy metal response transcriptional regulator Rmet_5979 37774 - 36824 - | cation diffusion facilitator family transporter TERM 26 37815 - 37792 - R 100 -12.5 -4.86033 | opp_overlap 37790 AAACTCCTATAAAAA TTGGGCGGT ACGATG ACCGCCCAA GGATTTACGTCATGC Rmet_5980 41016 - 37825 - | heavy metal efflux pump CzcA Rmet_5981 42595 - 41033 - | membrane fusion protein cluster 2 TERM 27 41859 - 41827 - G 73 -9.7 -3.85698 | opp_overlap 41826 41825 41829 TGCGCTGGTCAGAAA GTCCGGTGCTCGCGA TGA CCGCGAGAACCTGTC CCTTCTTAACCTGTT TERM 28 42557 - 42572 + g 87 -6 -5.09762 | GCCCACCAGTACGAT GGCCGC AATG GCAGCC TTTTGTTTGTTCGAA Rmet_5982 43869 - 42613 - | outer membrane efflux protein TERM 29 43963 - 43927 - g 82 -4.2 -5.05228 | overlap 43902 43929 43930 ACGAAAGGAGAAAAA GAGTCGTCGTCTCGCC GATCA AGCGAGACGCTGCCAC TGAGGACGGTCGGGA Rmet_5983 43888 - 44334 + | hypothetical protein Rmet_5984 45428 - 44607 - | isoprenylcysteine carboxyl methyltransferase TERM 30 45678 - 45694 + G 78 -3 -4.94902 | gap 1, overlap 45669 CACTCACATGCTCGT CGCACTG GGGG CA-TGCG TTTTTGTCGTGGTTC Rmet_5985 45508 - 45966 + | MgtC/SapB transporter Rmet_5986 46860 - 46570 - | hypothetical protein TERM 31 47782 - 47801 + G 73 -15 -2.52464 | opp_overlap 47798 GCCGCGCGCGATACG GCGCTGGC CGAA GCCAGCGC TGCCTTGGCGGCAGC TERM 32 48005 - 47978 - g 84 -13.4 -3.72695 | gap 1, overlap 47950 47979 AGCTCCTGCAGGAAA CCGCGCACCAGCG CGA CGC-GGTGCGCGC CGAGCGCGCGCAGCT TERM 33 48004 - 47979 - g 84 -16.9 -2.83403 | gap 1, overlap 47950 47978 GCTCCTGCAGGAAAC CGCGCACCAGCG CGA CGC-GGTGCGCG CCGAGCGCGCGCAGC Rmet_5987 47347 - 48285 + | hypothetical protein TERM 34 48638 - 48662 + G 82 -15.7 -3.14132 | opp_overlap 48630 GAACGCAGCAGCGGT GCCGGCTGCCT CCG AGGCAGCCGGG TTGGTAGCAGCGCCA Rmet_5988 48282 - 49769 + | phage integrase-like SAM-like TERM 35 51831 - 51819 - g 71 -9.1 -3.7732 | opp_overlap 51817 GCTGGAGATCAAGAA GCTGG ATG CCAGC AAGTTTGATACGCCT Rmet_5989 50269 - 52590 + | cytochrome c, class I Rmet_5990 53417 - 53019 - | MerR family transcriptional regulator Rmet_5991 53495 - 53842 + | mercuric transporter MerT TERM 36 54059 - 54032 - g 85 -4.8 -5.08601 | gap 1, overlap 54034 CGATTTCAACAAAAA GACCGCGACCATC ACC GATGACC-CGGAC AAGGCCAAGGCGGAG Rmet_5992 53868 - 54134 + | heavy metal transport/detoxification protein Rmet_5993 54139 - 54513 + | alkylhydroperoxidase AhpD core Rmet_5994 55657 - 54962 - | GntR family transcriptional regulator Rmet_5995 55824 - 56702 + | fumarylacetoacetate (FAA) hydrolase Rmet_5996 56702 - 57484 + | alpha/beta hydrolase fold Rmet_5997 57506 - 58837 + | amidohydrolase Rmet_5998 59109 - 60353 + | hypothetical protein Rmet_5999 60488 - 61546 + | porin Rmet_6000 61658 - 61933 + | hypothetical protein Rmet_6001 62757 - 61921 - | cointegrate resolution protein T TERM 37 62818 - 62786 - R 74 -3.4 -4.75954 | overlap 62789 AAAACGGAAAATAAA GCACGCTAAG-CCGGT TGC AGCGGTCGTAGCG-GC CTGAACTTGCCCGCG Rmet_6002 63465 - 62791 - | transposase Tn3 TERM 38 63098 - 63082 - G 71 -4.3 -4.57073 | opp_overlap 63091, overlap 63085 CAGGCGGTTGAAAAA CACTGCC CTG GCCAGCG CATTGCGCGCCTCGC TERM 39 63963 - 63936 - R 89 -12 -4.21922 | GGATGGAAAAGGAAA CGCCCCGGCT GTCTTGCT AGCCAGGGCG TCGGTGGTGCAGTTC TERM 40 64256 - 64236 - R 100 -14 -5.35224 | CGCAGAAAAACAAAA CCCCCGTG AATAA CACGGGGG CGTAGAGGCTTGACG Rmet_6003 64804 - 64274 - | hypothetical protein Rmet_6004 65289 - 64969 - | hypothetical protein TERM 41 65141 - 65179 + g 81 -13.3 -3.60971 | gap 1, opp_overlap 65148, overlap 65148 ACGTCCGCCGATGAT GTGAAAAGGCCATTCGGG TTCT CCCGA-TGGCCTTTTTTC TTTGGGGCTTGCGAT TERM 42 65172 - 65148 - G 85 -12.2 -4.15565 | gap 1, opp_overlap 65148 65141 CCGATGATGTGAAAA GGCCATTCGGG TTCT CCCGA-TGGCC TTTTTTCTTTGGGGC TERM 43 65148 - 65172 + g 100 -12.2 -5.63517 | gap 1, opp_overlap 65148, overlap 65141 CCGATGATGTGAAAA GGCCATTCGGG TTCT CCCGA-TGGCC TTTTTTCTTTGGGGC Rmet_6005 65301 - 67238 + | heat shock protein DnaJ-like protein Rmet_6006 68551 - 67376 - | phage integrase Rmet_6007 68977 - 69981 + | hypothetical protein TERM 44 70003 - 70030 + T 79 -12.6 -3.54408 | opp_overlap 70003, overlap 69999 GCCACAAAAGAAAAA CCCCGGCAGCTC GAGA GAGCAACCGGGG TTGGTTTGGATCAGA TERM 45 70030 - 70003 - T 100 -14.8 -5.54907 | opp_overlap 70003 69999 GCCACAAAAGAAAAA CCCCGGCAGCTC GAGA GAGCAACCGGGG TTGGTTTGGATCAGA Rmet_6008 70427 - 70053 - | hypothetical protein TERM 46 70930 - 70905 - R 100 -16.9 -5.4182 | AATCAGAAAGAAAAA GCCCACCAGAC ATTG GTCCGGTGGGC TGGGCGGTTAAGCCG Rmet_6009 71777 - 70938 - | hypothetical protein TERM 47 71892 - 71863 - R 100 -13.7 -5.55855 | gap 1 CTCAAAAAAAGAAAA GCCTCCAG-TCACA CAT CGTGAGCTGGAGGC TGCGATCGCGGTGCG Rmet_6010 72442 - 72050 - | hypothetical protein TERM 48 72467 - 72497 + r 75 -14.1 -2.84574 | gap 1, opp_overlap 72467 72468, overlap 72464 GATCAGAAGAGAAAA TGGCCCGT-CACTC GCGA GAGTGGACGGGCCG TCGTTGGTTAGAGTG TERM 49 72497 - 72467 - R 100 -11.9 -4.75289 | gap 1, opp_overlap 72464 72467, overlap 72468 GATCAGAAGAGAAAA TGGCCCGT-CACTC GCGA GAGTGGACGGGCCG TCGTTGGTTAGAGTG TERM 50 72496 - 72468 - R 93 -15.4 -3.44089 | gap 1, opp_overlap 72467 72464, overlap 72467 ATCAGAAGAGAAAAT GGCCCGT-CACTC GCGA GAGTGGACGGGCC GTCGTTGGTTAGAGT Rmet_6011 73119 - 72505 - | hypothetical protein TERM 51 73150 - 73127 - H 100 -14.6 -5.42975 | gap 1, opp_overlap 73124 CCAGACAAAGAAAAA CCCCGG-GCAC TAT GTGCGCCGGGG CCATGGGTTACTCCT TERM 52 73384 - 73348 - g 100 -10.9 -5.1861 | overlap 73377 TCGAGGACCAAAAAA CCCTTCAGTTTCGAG GTATCCA CGCGAAACTGCAGGG CAGGCGCACGTTCGG Rmet_6012 73260 - 73574 + | hypothetical protein TERM 53 73748 - 73720 - T 100 -11 -5.61881 | opp_overlap 73721, overlap 73721 GGCCAAAAACAAAAA GCCCCGCTCATC TTTCG GATGAACGGGGT TCTGAGTTGCACTAC TERM 54 73747 - 73721 - T 93 -14.5 -3.95502 | opp_overlap 73721, overlap 73720 GCCAAAAACAAAAAG CCCCGCTCATC TTTCG GATGAACGGGG TTCTGAGTTGCACTA TERM 55 73721 - 73747 + T 79 -13 -3.42354 | opp_overlap 73720 73721 GCCAAAAACAAAAAG CCCCGCTCATCT TTC GGATGAACGGGG TTCTGAGTTGCACTA TERM 56 73815 - 73796 - T 79 -12.2 -3.56092 | CGACGAGTTTTGAAA TGCGCAGT GCCT ACTGCGCA GGCGGATCGCTCCGC Rmet_6013 74234 - 73806 - | hypothetical protein TERM 57 74423 - 74455 + r 70 -9.8 -3.54146 | gap 1, opp_overlap 74424, overlap 74421 74424 TACCGGAAAAGAAAA ATCCCCGGGCAGCGT GGAT ACGCC-CCCGGGGAG TGTTTAATTGAACAA TERM 58 74454 - 74424 - R 100 -15.5 -5.46706 | gap 1, opp_overlap 74423 74421 74424 ACCGGAAAAGAAAAA TCCCCGGGCAGCGT GGAT ACGCC-CCCGGGGA GTGTTTAATTGAACA TERM 59 74424 - 74454 + r 73 -13.3 -2.72166 | gap 1, opp_overlap 74424, overlap 74423 74421 ACCGGAAAAGAAAAA TCCCCGGGCAGCGT GGAT ACGCC-CCCGGGGA GTGTTTAATTGAACA Rmet_6014 76252 - 74459 - | hypothetical protein TERM 60 76335 - 76322 - R 71 -6.7 -4.19238 | CGGTTAAGTGGAAAA CCCTT GCAG AAGGG AATGCAGATCAGGAA TERM 61 76386 - 76364 - R 100 -13.4 -4.88405 | opp_overlap 76363, overlap 76365 AACGCGCAAAGAAAA TGCCGCTCAC ATA GTGAGCGGCC GTGTGTGCTGGTAGC TERM 62 76385 - 76365 - R 100 -16.9 -3.51958 | opp_overlap 76363, overlap 76364 ACGCGCAAAGAAAAT GCCGCTCAC ATA GTGAGCGGC CGTGTGTGCTGGTAG Rmet_6015 77303 - 76650 - | hypothetical protein TERM 63 77524 - 77490 - R 100 -13 -5.4251 | gap 1 GCGACAGATAAAAAA TGCCCACCG-GTTCC TGAGTC GGAACGCGATGGGCA TGGACGGGTTGGATA TERM 64 77636 - 77605 - R 100 -13 -4.8622 | overlap 77606 CGGCCGAATGAAAAA CCCCACCAGTTGAC AGCA GTCACCTGGTGGGT CGATGGGGTTACGAA TERM 65 77635 - 77606 - R 93 -16.5 -3.5125 | overlap 77605 GGCCGAATGAAAAAC CCCACCAGTTGAC AGCA GTCACCTGGTGGG TCGATGGGGTTACGA Rmet_6016 78024 - 77659 - | hypothetical protein TERM 66 78160 - 78124 - R 100 -10.3 -5.11613 | gap 2, overlap 78126 78129 AGAGGAGGGAAAAAA GAGAATGCCCCTCAACC GTTGT GGT-GAGGGGCACTC-C AGGTTTGGACTTAGC TERM 67 78159 - 78126 - R 100 -14 -4.1821 | gap 1, overlap 78124 78129 AGGAGGGAAAAAAGA GAATGCCCCTCAACC GTTGT GGT-GAGGGGCACTC CAGGTTTGGACTTAG TERM 68 78156 - 78129 - R 95 -12.1 -4.19369 | gap 1, overlap 78126 78124 AGGGAAAAAAGAGAA TGCCCCTCAACC GTTGT GGT-GAGGGGCA CTCCAGGTTTGGACT Rmet_6017 78696 - 78181 - | hypothetical protein TERM 69 78797 - 78771 - R 100 -16.7 -4.20768 | ACCTTGAAGAAAGAA GCCACCGTATC GAGAG GATACGGTGGC CATCAGGTAGTTAGG Rmet_6018 79662 - 78808 - | hypothetical protein Rmet_6019 80486 - 79662 - | hypothetical protein TERM 70 80577 - 80561 - R 100 -11.5 -5.47218 | TTCGAGCGAAAAAAA GCCCGCA TAA CGCGGGC AAGCGGTGATACGAG Rmet_6020 80863 - 80603 - | hypothetical protein Rmet_6021 81561 - 81040 - | hypothetical protein Rmet_6022 81933 - 81574 - | hypothetical protein Rmet_6023 82979 - 81981 - | hypothetical protein TERM 71 83446 - 83405 - R 100 -23.9 -3.89346 | GCTGGAGCCTAGAAA GCCAAAGGCCCGCACGATC TTTC AATCGTGCGGGCCTTCGAC TGCAAGTGCGACCTT TERM 72 83620 - 83598 - R 100 -20.6 -5.40004 | CAGCAAAGGAAAAAA CGCCGCGGAG AAG CTCCGCGGCG TGCTGAACAACAGTT Rmet_6024 84605 - 83634 - | putative lipoprotein transmembrane TERM 73 84778 - 84748 - R 100 -11.1 -5.08255 | gap 1 AGCTGCAAAACAAAA GGCCCGCAACCTCC GAGG GGAGAA-GCGGGCC ATGGGCTAAATCACG Rmet_6025 85249 - 84800 - | hypothetical protein TERM 74 85562 - 85546 - g 70 -5.7 -4.24342 | TGGTGGACGAAGAAA CGGCCAC GAC GCTGCCG AGCGAGTATCTGGTG TERM 75 85577 - 85614 + G 93 -16.3 -3.85698 | GAGCGAGTATCTGGT GCCGGCCGTCGACACTG ATGA CATTGTCGACGGTCGCC TTTGTACGCCGCGGC Rmet_6026 85530 - 86030 + | hypothetical protein Rmet_6027 86292 - 86570 + | hypothetical protein Rmet_6028 86560 - 86928 + | hypothetical protein Rmet_6029 86954 - 87214 + | hypothetical protein Rmet_6030 88161 - 87166 - | hypothetical protein TERM 76 87269 - 87256 - G 75 -3.7 -4.59773 | CCTGATCGGCAAAAA CGTGG AATG CCTCG ATGCCCTACCCATAC Rmet_6031 88850 - 88182 - | hypothetical protein Rmet_6032 89278 - 88907 - | PilT protein-like protein Rmet_6033 89472 - 89275 - | hypothetical protein TERM 77 89370 - 89399 + g 70 -2.7 -4.66537 | gap 1, opp_overlap 89371, overlap 89371 CTTCACGCTGGATCA AGGC-CTTTAGCGC CTC GCGCACAAGTGCCG TTTTCTCTTCCAGCC Rmet_6034 89638 - 90363 + | hypothetical protein Rmet_6035 90360 - 91310 + | hypothetical protein Rmet_6036 91344 - 91613 + | hypothetical protein TERM 78 92116 - 92129 + G 79 -6.7 -4.56597 | CCCTTTACCCACTGT TTGGG CAAT CCCAA TTTTTCGCAGGCCGA Rmet_6037 91842 - 92210 + | hypothetical protein TERM 79 92883 - 92893 + G 93 -4 -5.27938 | CTGCGCAAGCGCGTG TCAA TTC TTGA TTTTTGTTTGAGCCT TERM 80 92950 - 92929 - g 70 -5.1 -4.34402 | gap 1, opp_overlap 92948, overlap 92933 TTCGCGAGACCAAAA GCTATCGCGT ATC ACGCGAG-GC ATTCACAAAGCTGGA Rmet_6038 92649 - 93095 + | hypothetical protein Rmet_6039 93525 - 93127 - | hypothetical protein Rmet_6040 93837 - 94217 + | hypothetical protein Rmet_6041 95792 - 94986 - | hypothetical protein TERM 81 96363 - 96378 + G 71 -10.4 -3.60296 | opp_overlap 96362 96363 CCGGTTCCTGGAAAC GGTCGG GATA CCGACC TTTACCCTCCAGGTG Rmet_6042 96139 - 96495 + | hypothetical protein TERM 82 96645 - 96632 - T 81 -8.1 -4.60317 | opp_overlap 96631, overlap 96623 ACAGAACAAGGAAAA GCAGG ATTC CCTGC ATGGCTTTCGGAAAC TERM 83 96696 - 96718 + T 100 -14.8 -5.60993 | opp_overlap 96696 TCTAACCCACAGAAA CCGCCGGCGC TAT GCGTTGGCGG TTTTTTTATGCCCGA TERM 84 96718 - 96696 - T 80 -10.4 -4.09108 | opp_overlap 96696 TCTAACCCACAGAAA CCGCCGGCGC TAT GCGTTGGCGG TTTTTTTATGCCCGA Rmet_6043 97962 - 96736 - | hypothetical protein TERM 85 97269 - 97240 - G 72 -12.9 -3.1352 | gap 1, overlap 97238 97236 GTCGAAGTCAATATA GGCGATCGCGT-CC TCT GGCACCCGATCGCC CAAGCTGTACATCAG Rmet_6044 98709 - 97975 - | hypothetical protein Rmet_6045 99052 - 98744 - | hypothetical protein Rmet_6046 99784 - 99521 - | hypothetical protein Rmet_6047 100751 - 100383 - | hypothetical protein Rmet_6048 102742 - 100805 - | superfamily I DNA/RNA helicase-like protein Rmet_6049 103047 - 102778 - | hypothetical protein TERM 86 102825 - 102841 + g 71 -7.3 -4.17762 | overlap 102827 CCCAGACGTCCTGCC TTGCATC GCC GATGCGA TTCTTTTCGAAGGTC Rmet_6050 103263 - 103601 + | hypothetical protein Rmet_6051 103598 - 103933 + | hypothetical protein Rmet_6052 104064 - 104861 + | hypothetical protein TERM 87 104868 - 104892 + F 100 -15.7 -5.56372 | TTCCTTTAACTGGCC CGCCACCCTCC TTT GTAGGGTGGCG TTTTTCTTTTGCTTT Rmet_6053 105180 - 105464 + | hypothetical protein TERM 88 105552 - 105571 + F 75 -7.9 -4.16284 | TACGTGTTATGTATC CCAACCA TCTGCC TGGTTGG TTTATTGACACGTGT Rmet_6054 105649 - 105933 + | hypothetical protein Rmet_6055 105960 - 107105 + | hypothetical protein TERM 89 107127 - 107146 + T 100 -10 -6.34424 | opp_overlap 107126 CCATGCGCCATCAAG CCCACTGA GGAA TCGGTGGG TTTTTTTTTTGCCCG TERM 90 107282 - 107253 - T 100 -15.9 -5.60993 | gap 1, opp_overlap 107260 GTGCGGACAAAAAAA CACCCAAG-TGAGC ACG GCTCAACTTGGGTG TGGCATAGCCAACCG TERM 91 107649 - 107619 - T 100 -15.5 -4.27316 | gap 2, overlap 107599 GCGTTGAATTGAAAA GCCCGCG-G-CCGAC TGA GTCGGTCACGCGGGC GTCGGGCTACACAAT Rmet_6056 108143 - 107904 - | hypothetical protein TERM 92 108261 - 108284 + r 84 -16.8 -2.69964 | opp_overlap 108261, overlap 108258 CGAAATGAAAAGAAA GCCCCCTCTT CTGG AAGAGGGGGC TACTGTGGTTACGAG TERM 93 108284 - 108261 - R 100 -16.8 -4.82998 | opp_overlap 108258 108261 CGAAATGAAAAGAAA GCCCCCTCTT CTGG AAGAGGGGGC TACTGTGGTTACGAG Rmet_6057 109449 - 108529 - | hypothetical protein Rmet_6058 111857 - 109503 - | diguanylate cyclase/phosphodiesterase TERM 94 112221 - 112198 - R 100 -8.8 -5.77853 | opp_overlap 112197, overlap 112185 112199 AAGGGGCAAAAAAAA GCCCCACGAA ATCT CTCGTGGGGG CATGTTGCGGTTAGA TERM 95 112220 - 112199 - R 89 -12.3 -4.05085 | opp_overlap 112197, overlap 112185 112198 AGGGGCAAAAAAAAG CCCCACGAA ATCT CTCGTGGGG GCATGTTGCGGTTAG Rmet_6059 112717 - 112232 - | hypothetical protein TERM 96 112994 - 112959 - H 73 -13.4 -2.69151 | opp_overlap 112962 112967 112981, overlap 112956 112967 CGCGTTCAGAGATGA GTACCCAATGCGCAGT GAGC ATTGCGCATTGGGTAT TGAGCACTGCCCAGG TERM 97 112962 - 112991 + H 87 -17.3 -3.03124 | opp_overlap 112959 112956 112967, overlap 112967 112981 GTTCAGAGATGAGTA CCCAATGCGCAGT GAGC ATTGCGCATTGGG TATTGAGCACTGCCC TERM 98 113319 - 113304 - H 77 -11.8 -3.59979 | GTTTTGGACCGCAAA GCCCGC TCCC GCGGGC AAGGTGTAACGGTTT Rmet_6060 114645 - 115982 + | hypothetical protein Rmet_6061 116651 - 116049 - | hypothetical protein TERM 99 117193 - 117213 + r 84 -11.8 -4.11394 | opp_overlap 117193 TCGAGAGCAAAAAAA GCCCGCGT CATTT GCGCGGGC TTTTCACGGTGAAAT TERM 100 117213 - 117193 - R 100 -11.1 -5.58454 | opp_overlap 117193 TCGAGAGCAAAAAAA GCCCGCG TCATTTG CGCGGGC TTTTCACGGTGAAAT Rmet_6062 118346 - 117237 - | ParB family protein Rmet_6063 119467 - 118343 - | ParaA family ATPase Rmet_6064 119764 - 120072 + | hypothetical protein Rmet_6065 120069 - 120530 + | hypothetical protein Rmet_6066 121213 - 120527 - | hypothetical protein Rmet_6067 122204 - 121347 - | integrase catalytic subunit Rmet_6068 122596 - 122258 - | transposase IS3/IS911 TERM 101 122315 - 122301 - G 82 -4.2 -5.00616 | GCCTGCGCGAAAAAA GCGC TGGCAGT GCGC AGGATGTCGTTGGCG Rmet_6069 122918 - 122601 - | hypothetical protein TERM 102 123185 - 123200 + r 81 -8.2 -4.58773 | opp_overlap 123185 GAGTGCCTTTAGAAA CGGTCG CGTG CGGCCG TTTTGCTTTGGTGCA Rmet_6070 123692 - 123216 - | ATP dependent DNA ligase Rmet_6071 124221 - 123850 - | hypothetical protein Rmet_6072 124451 - 125152 + | XRE family transcriptional regulator Rmet_6073 125211 - 125507 + | transposase IS3/IS911 Rmet_6074 125504 - 126397 + | integrase catalytic subunit Rmet_6075 126441 - 126713 + | hypothetical protein Rmet_6076 127493 - 127095 - | hypothetical protein TERM 103 127572 - 127558 - R 100 -9.2 -5.75945 | opp_overlap 127558 AGGGTCGAAAAAAAA CGCCCC AGT GGAGCG TTTCTTGGAATTGGC TERM 104 127558 - 127572 + r 71 -7 -4.20918 | opp_overlap 127558 AGGGTCGAAAAAAAA CGCCCC AGT GGAGCG TTTCTTGGAATTGGC TERM 105 127703 - 127717 + r 95 -2.8 -5.72207 | GATTGCTTTTCAGCT TGAATC TCA GTTTCA TTTTTTTCCTTTCAA Rmet_6077 128597 - 127959 - | hypothetical protein Rmet_6078 129142 - 129591 + | hypothetical protein TERM 106 129641 - 129622 - T 76 -12.1 -3.39895 | opp_overlap 129622 CGTTTGATGAACCAA GGCCCGC TAAGTC GCGGGCC TTTTTTCATGGGTCA TERM 107 129622 - 129641 + T 100 -12.1 -5.1675 | opp_overlap 129622 CGTTTGATGAACCAA GGCCCGC TAAGTC GCGGGCC TTTTTTCATGGGTCA Rmet_6079 129986 - 129654 - | hypothetical protein Rmet_6080 131685 - 130099 - | hypothetical protein TERM 108 130934 - 130894 - G 80 -5.4 -4.79756 | gap 1, overlap 130896 130931 GAGAGAAGTTAAAAA CGGGCCCT-GCAATGCCCA CCAC TGGGCATCGCGACAACCAG GCATCAGCCCGCAAA Rmet_6081 132592 - 131900 - | hypothetical protein Rmet_6082 133842 - 132700 - | hypothetical protein Rmet_6083 134757 - 133948 - | hypothetical protein Rmet_6084 135492 - 134872 - | hypothetical protein Rmet_6085 135906 - 135565 - | hypothetical protein Rmet_6086 138070 - 135920 - | phage integrase TERM 109 136012 - 136022 + g 70 -4.6 -4.4078 | opp_overlap 136006 TGGTATCAAGCGATG CGTG CCC CGCG TTTTGCTTGACGGCC Rmet_6087 139335 - 138067 - | hypothetical protein TERM 110 139692 - 139665 - R 93 -16.4 -3.53012 | opp_overlap 139671, overlap 139671 TGCGGCGCCGGCAAA GAAAAAGCCGGC TGGC GCCGGCTTCTTC CCAGTAGAGCGTGGC TERM 111 139686 - 139671 - R 100 -11.8 -5.27335 | opp_overlap 139671, overlap 139665 GCCGGCAAAGAAAAA GCCGGC TGGC GCCGGC TTCTTCCCAGTAGAG TERM 112 139671 - 139686 + r 77 -11.8 -3.63515 | opp_overlap 139665 139671 GCCGGCAAAGAAAAA GCCGGC TGGC GCCGGC TTCTTCCCAGTAGAG Rmet_6088 140111 - 139713 - | hypothetical protein TERM 113 140174 - 140145 - H 74 -6.4 -4.43272 | gap 1, overlap 140146 140164 ACCCAAAAGTCAAAA TGCGAGCGGACGT AGTAA AC-CCCGCGCGCA CGCCGTCAGGTGTGC Rmet_6089 140699 - 141916 + | hypothetical protein TERM 114 141967 - 141985 + T 74 -12.4 -3.22653 | opp_overlap 141967, overlap 141965 CACAAAAGCGAAAAA GGGCGATC ATC GGTCGCCC TCTTCTGAACGTGCT TERM 115 141985 - 141967 - T 100 -10.2 -4.89729 | opp_overlap 141965 141967 CACAAAAGCGAAAAA GGGCGATC ATC GGTCGCCC TCTTCTGAACGTGCT Rmet_6090 142452 - 142009 - | histone-like DNA-binding protein Rmet_6091 142784 - 142476 - | hypothetical protein TERM 116 142836 - 142860 + G 70 -11.5 -3.32268 | opp_overlap 142841, overlap 142841 142848 CAAGCTTCCCGCGAT GAGAATCGCCA ACG TCGCGATTCTC TTCTCGACGTACTTC TERM 117 143168 - 143182 + G 70 -5.6 -4.21936 | TCCGCATTTCCCTTG CAGCGA CTC TCGCAG TTTTGGCCTTCTGCG TERM 118 143308 - 143322 + G 75 -2.8 -4.73614 | overlap 143295 ATCGGGTTTGCGCGG CGCA GACCAAG TGCG TTTGTTTTCGTGCTC Rmet_6092 142810 - 143562 + | hypothetical protein TERM 119 143657 - 143629 - T 100 -16.8 -4.05446 | gap 1, opp_overlap 143629 CCCCTGAAGCACAAA GGCCCCACGAACC GCGA GGT-CGTGGGGCC TTTCGACTTCTGAAC TERM 120 143629 - 143657 + T 100 -16.8 -3.69354 | gap 1, opp_overlap 143629 CCCCTGAAGCACAAA GGCCCCACGAACC GCGA GGT-CGTGGGGCC TTTCGACTTCTGAAC Rmet_6093 145491 - 143704 - | hyicolysin TERM 121 143924 - 143914 - G 72 -8.2 -4.06055 | overlap 143909 AGCCGGGAAACCAAA GCCC TTG GGGC TCGTCGCTGCTGGAA Rmet_6094 145895 - 145599 - | hypothetical protein Rmet_6095 148463 - 145899 - | hypothetical protein TERM 122 146041 - 146057 + g 70 -5 -4.36206 | overlap 146043 146052 GCGTGCCCGTTCATC CGGCCG CACAC CGGCAG TTTGTTGTCGCTTAT TERM 123 146548 - 146586 + g 80 -13.8 -3.37796 | TGCTCTGTCGCGACA TCGTTCGTAGGCGGCTCC ATT GGAGCTGCCGGCGACTGA TTCTCCGTGATGACG Rmet_6096 149270 - 149815 + | hypothetical protein Rmet_6097 150334 - 149828 - | 2-nitropropane dioxygenase, NPD Rmet_6098 150985 - 150389 - | 2-nitropropane dioxygenase, NPD Rmet_6099 151508 - 151861 + | hypothetical protein TERM 124 152286 - 152257 - g 70 -2.7 -4.66537 | gap 1, opp_overlap 152258, overlap 152258 GGCTGGAAGAGAAAA CGGCACTTGTGCGC GAG GCGCTAAAG-GCCT TGATCCAGCGTGAAG Rmet_6100 152184 - 152420 + | hypothetical protein Rmet_6101 153594 - 153163 - | hypothetical protein Rmet_6102 154032 - 154658 + | phage integrase Rmet_6103 155734 - 155090 - | acyl-CoA dehydrogenase-like protein TERM 125 155873 - 155888 + r 84 -11.8 -4.09739 | opp_overlap 155873 GTGGCGTAAAAAAAA GCCGCC CGGA GGCGGC TTTTGCCAAAGTTGC TERM 126 155888 - 155873 - R 100 -11.8 -5.75342 | opp_overlap 155873 GTGGCGTAAAAAAAA GCCGCC CGGA GGCGGC TTTTGCCAAAGTTGC Rmet_6104 156170 - 155904 - | hypothetical protein Rmet_6105 156718 - 156365 - | hypothetical protein Rmet_6106 157550 - 156786 - | putative high-affinity Fe2+/Pb2+ permease Rmet_6107 158417 - 158827 + | hypothetical protein Rmet_6108 158857 - 159141 + | hypothetical protein TERM 127 159150 - 159166 + T 77 -15.1 -2.71364 | GGGCTGATGCTGCCA GGGCGCG TTG CGCGCCC TACTTCGCCCACTCG Rmet_6109 159660 - 159166 - | hypothetical protein TERM 128 159211 - 159201 - G 70 -2.4 -4.62475 | opp_overlap 159203, overlap 159203 ATGCAGAAACGAAAA TCCG CAA CGGC CTCGTTGCCTGCATT TERM 129 159312 - 159332 + g 81 -3.3 -5.00884 | gap 1, opp_overlap 159315, overlap 159315 CTTCGCTCTGCGATA GCA-CGAC AGCGAC GTCGATGC TTTTTTCACCCAGGT Rmet_6110 161102 - 159711 - | heavy metal sensor signal transduction histidine kinase TERM 130 159760 - 159784 + g 74 -5 -4.58395 | gap 1 ATGGTGAAACGGGTT TTTCCGCCGGA ACAG TCCG-CGGCAA TTTTTCCGCCATGCG Rmet_6111 161785 - 161099 - | two component heavy metal response transcriptional regulator TERM 131 161819 - 161832 + H 80 -3.9 -5.0916 | CGCGATCGGCCGGGT TTTGT TAAT ACAAA TTTTTATCTTCGGCG Rmet_6112 161989 - 163833 + | copper-resistance protein CopA Rmet_6113 163865 - 165352 + | copper resistance B precursor Rmet_6114 165384 - 165782 + | copper resistance protein CopC Rmet_6115 165789 - 166706 + | copper resistance D Rmet_6116 166778 - 167254 + | blue (type1) copper domain-containing protein TERM 132 167269 - 167252 - T 71 -6.3 -4.36914 | gap 1, overlap 167255 GTCGTTGTGAGAAAA TAG-CGCG GCA CGCGACTA ACCACTCCCGCCAAA TERM 133 167293 - 167330 + T 75 -8.5 -4.15703 | gap 1, overlap 167294 167316 CGCCAAACTGACCGA TGGCCTCCA-ACCTGT GATGACG ACAGGCATGGAGGCCG TTCTTGTTTCTCGAC Rmet_6117 167873 - 167349 - | cytochrome c, class I TERM 134 167877 - 167911 + r 70 -4.9 -4.56883 | gap 1, overlap 167878 167882 167883 GGATTCTTCCATGCA GCATTGTCTGGCGGCA TTGG TGCCGCCAG-CTCTGA TTTCTTTAATCTTGG TERM 135 167883 - 167906 + r 74 -12.4 -3.1541 | overlap 167882 167878 167877 TTCCATGCAGCATTG TCTGGCGGCA TTGG TGCCGCCAGC TCTGATTTCTTTAAT Rmet_6118 168330 - 167917 - | hypothetical protein Rmet_6119 170792 - 168375 - | heavy metal translocating P-type ATPase TERM 136 169884 - 169912 + g 78 -3.8 -4.72272 | overlap 169885 GGCCACATCCTCCTC TTGTCCGTCG GTGCCAATG CGGCGGGCAG TTTTTGGTGCCAGGC TERM 137 171232 - 171211 - H 75 -2.2 -5.00616 | CTGCCCGGCAAAAAA GTGACGCC ATGACA GACACCAC CCGAACCCTCATCGA Rmet_6120 171219 - 172484 + | hypothetical protein TERM 138 172570 - 172517 - T 83 -17 -2.57132 | gap 3, overlap 172523 GCGGGGCTCCAGAAT GCACAACGCCCATGGACGACACCGA GCCTTAT TCGGTG-CG-CCATGGGCGC-GTGC CGTCTCAGCCAGGAC TERM 139 172565 - 172523 - T 93 -16.5 -3.45054 | gap 2, overlap 172517 CTCCAGAATGCACAA CGCCCATGGACGACACCGA GCCTTAT TCGGTG-CG-CCATGGGCG CGTGCCGTCTCAGCC Rmet_6121 172830 - 172594 - | hypothetical protein Rmet_6122 173414 - 172953 - | hypothetical protein TERM 140 174044 - 174030 - g 72 -11.4 -3.45324 | overlap 174028 GATCGGCAGCAAAGA CGGGCA TCC TGCCCG ATTGCCGGCGGAGCT Rmet_6123 173587 - 174222 + | hypothetical protein Rmet_6124 174688 - 174389 - | hypothetical protein TERM 141 174783 - 174812 + H 100 -6.4 -5.75342 | overlap 174785 CCCCGGTGGAACCCT TAGCGGTTGCTT CGATCT GGGCAACCGCTC TTTTTTTTGCGAAAC TERM 142 174785 - 174810 + H 84 -9 -4.52949 | overlap 174783 CCGGTGGAACCCTTA GCGGTTGCTT CGATCT GGGCAACCGC TCTTTTTTTTGCGAA TERM 143 175156 - 175173 + G 93 -3.3 -5.24129 | opp_overlap 175150, overlap 175153 CCCACGCAACTGCGA TGCCGCG CGAT CGTTGCA TTTTTTCTCGGCACG Rmet_6125 175036 - 175614 + | phage integrase Rmet_6126 176136 - 175840 - | hypothetical protein TERM 144 176363 - 176347 - R 79 -12.3 -3.4252 | TCCGACGGATGACAA GGCAAGG AGA CCTTGCC GCGCATTCACAAGCG TERM 145 176620 - 176601 - R 95 -5.7 -5.61596 | gap 1, overlap 176602 ATGTGTACAAAAAAA GGACCACC GATAT GGTGG-CC TCAAGCTCTCTTGTT Rmet_6127 177737 - 176670 - | porin TERM 146 177377 - 177405 + g 71 -13.9 -2.77899 | overlap 177359 177374 CGTCGTAGATCGGCG TGGTTTGGCGACC CAG GGTCACCAGACCA TACTTGCTGCCCAGG Rmet_6128 179045 - 177942 - | glycosyl transferase family protein TERM 147 178382 - 178414 + g 71 -4.1 -4.56597 | TGACGCCATCGATCG CGAGCTTCAACAAGC GGC GGTAGTTGAACTTCG TTTTTCCCGAAGCGC TERM 148 178573 - 178558 - G 73 -6 -4.371 | overlap 178559 CTCATCAGACGAAAA TCGCCG GTGT CGGCGG GGATGTCGATGTCAC Rmet_6129 179425 - 179042 - | GtrA-like protein TERM 149 179244 - 179222 - G 74 -11.2 -3.58037 | overlap 179213 TAGGAATCTCGCAAA GCGCGACGAA GCA TCCGACGCGC GCACGAACACCCACC Rmet_6130 181047 - 179422 - | glycosyl transferase family protein TERM 150 179906 - 179871 - G 71 -14 -2.72344 | GGGCACCGGCAACCA GCCCGCCAACCACCAG GGCG CCGATGGTTAGCGTGC TCCAGAAGGAGAAAT Rmet_6131 181913 - 181044 - | methyltransferase type 11 Rmet_6132 182488 - 182093 - | hypothetical protein TERM 151 182616 - 182588 - H 70 -10.1 -3.4252 | overlap 182569 182591 CGCCATGCACCAGAA TCAGGCGGGGCGC ACG GCGCCCAGACGGA CCGAATCCCTTGCGC Rmet_6133 182770 - 183165 + | hypothetical protein Rmet_6134 183238 - 184545 + | outer membrane efflux protein TERM 152 184569 - 184549 - g 70 -5.4 -4.36411 | gap 1, overlap 184552 GATCAACCATGAAAA CGAC-CGCA ATCG CGCGCGTCG CGATGAGTCTCGCCG TERM 153 185387 - 185362 - g 75 -11.8 -3.55622 | CCGAAGTGCCTGAAA GCCAGGCGGC TGCCCT GCGGCCTGGC CAGGCGGTAATGGCA Rmet_6135 184542 - 186107 + | secretion protein HlyD Rmet_6136 186104 - 189274 + | heavy metal efflux pump CzcA TERM 154 189312 - 189278 - T 74 -12.9 -3.14132 | gap 2, opp_overlap 189278 CGGGCCGTGTAGCAA CTGTGCCTGGCGAGTCC CGG GGGC-CGCCAGGC-CAG TCTTCAGTGCATTGG TERM 155 189278 - 189312 + T 80 -15.1 -3.1085 | gap 2, opp_overlap 189278 CGGGCCGTGTAGCAA CTGTGCCTGGCGAGTCC CGG GGGC-CGCCAGGC-CAG TCTTCAGTGCATTGG Rmet_6137 190883 - 190011 - | methyltransferase type 11 Rmet_6138 191123 - 191404 + | hypothetical protein TERM 156 191700 - 191730 + GT 76 -12.6 -3.29144 | overlap 191703 GCGGGTCAGATCGCA ATCGCATTGGCCAC GGC GTGGCCAATGCTAC TTGTGGGGCGAATCA TERM 157 191703 - 191727 + GT 89 -18.7 -2.82623 | overlap 191700 GGTCAGATCGCAATC GCATTGGCCAC GGC GTGGCCAATGC TACTTGTGGGGCGAA TERM 158 191771 - 191827 + GT 72 -13.7 -2.56046 | gap 2, opp_overlap 191763 191806, overlap 191769 191780 191811 191818 CGGAAAAGGGCTGCG CGGCC-CGC-TTCGCGACGCGATTGTC ATCCA GGCAATCCCGCCGCGCGCGCGAGGCCG TGCCTTCGGGTTTCA Rmet_6139 191367 - 192647 + | major facilitator transporter Rmet_6140 194861 - 192744 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 159 194338 - 194315 - G 73 -15.2 -2.52623 | overlap 194314 194312 GCCGCCCGACAATAT CCGCGCCGGG ATAG CCCGTCGCGG CTGTGAAGGCACGAT Rmet_6141 195206 - 194871 - | hypothetical protein Rmet_6142 195823 - 195401 - | flagellar basal-body rod protein FlgB Rmet_6143 196096 - 196341 + | putative signal peptide protein TERM 160 196460 - 196486 + T 100 -21 -4.67982 | opp_overlap 196455 196453 GGCACGAAGAGCTTG TGGCTTGCCTCC TAC GGAGGCAAGCCA TTTTCTTGGGTGCGC Rmet_6144 198220 - 196994 - | drug antiporter protein Rmet_6145 201459 - 198229 - | heavy metal efflux pump CzcA Rmet_6146 202340 - 201456 - | secretion protein HlyD Rmet_6147 202649 - 202368 - | hypothetical protein Rmet_6148 203992 - 202646 - | outer membrane efflux protein TERM 161 202969 - 202994 + g 72 -6.7 -4.25104 | overlap 202952 CGGCCGCGACGCGCT CCACGGCCGCA TTGA TGCCGCTGCGG TTTTGATCGAACAGG TERM 162 203998 - 204014 + r 100 -13.7 -4.258 | opp_overlap 203978 203997 GTCGGCACATGACAG GGGCGCT GCG AGCGCCC TTTCTTCGTCAGTCG Rmet_6149 205042 - 204023 - | twin-arginine translocation pathway signal TERM 163 205438 - 205461 + G 75 -9.6 -3.9712 | gap 1, overlap 205428 CTGGCCGATGCGGCG GCG-CTCGATG CGG CGTCGAGTCGC TTTGTGGTGCCCTGC Rmet_6150 205321 - 206262 + | alpha/beta hydrolase fold Rmet_6151 207271 - 208587 + | ATPase involved in DNA repair Rmet_6152 208985 - 208737 - | integrase catalytic subunit Rmet_6153 209332 - 209006 - | hypothetical protein TERM 164 209976 - 209986 + G 70 -2.4 -4.62336 | opp_overlap 209969 TAACGCAAGCGGCGT GGCC GAC GACC TTTTTCACATCGAAT Rmet_6154 209467 - 210048 + | hypothetical protein Rmet_6155 210073 - 210480 + | hypothetical protein Rmet_6156 210540 - 210767 + | hypothetical protein TERM 165 210806 - 210770 - f 72 -13 -3.04144 | gap 1, opp_overlap 210772 210775, overlap 210773 210775 TCCTGAGCGTTAACA TGAGATCGCCGCGTAGC GATG GCTGCGCGGCGATC-CT GTCCTACGGTGCAAG TERM 166 210772 - 210805 + F 88 -18.9 -2.79796 | opp_overlap 210770 210773 210775, overlap 210775 CTGAGCGTTAACATG AGATCGCCGCGTAGC GATG GCTGCGCGGCGATCC TGTCCTACGGTGCAA TERM 167 210804 - 210773 - f 95 -20.2 -2.74523 | opp_overlap 210772 210775, overlap 210770 210775 TGAGCGTTAACATGA GATCGCCGCGTAGC GATG GCTGCGCGGCGATC CTGTCCTACGGTGCA TERM 168 210775 - 210802 + F 88 -19.2 -2.66634 | opp_overlap 210773 210770 210775, overlap 210772 AGCGTTAACATGAGA TCGCCGCGTAGC GATG GCTGCGCGGCGA TCCTGTCCTACGGTG TERM 169 210802 - 210775 - f 85 -17 -2.91728 | opp_overlap 210775 210772, overlap 210773 210770 AGCGTTAACATGAGA TCGCCGCGTAGC GATG GCTGCGCGGCGA TCCTGTCCTACGGTG Rmet_6157 211249 - 211740 + | hypothetical protein Rmet_6158 211871 - 212116 + | hypothetical protein TERM 170 212880 - 212854 - f 79 -8.6 -4.45068 | opp_overlap 212874 ATCGGCAACAACAAA TGGAGAAGGTCG GTA CGGCCGCCTCCA GCAAGGCTTTGGGGC Rmet_6159 213243 - 213440 + | hypothetical protein Rmet_6160 213827 - 214102 + | prevent-host-death protein Rmet_6161 214788 - 214288 - | hypothetical protein Rmet_6162 214978 - 215601 + | XRE family transcriptional regulator TERM 171 215654 - 215628 - T 100 -15.2 -4.63218 | opp_overlap 215630, overlap 215630 TCCCCGCCAAGAAAA GACGCCCCAGAT CGA ATCTGGGGCGTT TTCGTTACAGGACCA TERM 172 215630 - 215652 + T 100 -17.8 -4.4078 | opp_overlap 215630 215628 CCCGCCAAGAAAAGA CGCCCCAGAT CGA ATCTGGGGCG TTTTCGTTACAGGAC TERM 173 215652 - 215630 - T 100 -17.8 -3.93367 | opp_overlap 215630, overlap 215628 CCCGCCAAGAAAAGA CGCCCCAGAT CGA ATCTGGGGCG TTTTCGTTACAGGAC Rmet_6163 216726 - 215659 - | hypothetical protein TERM 174 217051 - 217079 + G 70 -7.9 -4.03234 | overlap 217054 CAATACGGTGCGTTG CAGGCCGAGCCCG TCG CGGGCCAGGCTGG TTTCTATCAGCGGAG Rmet_6164 216955 - 217401 + | hypothetical protein TERM 175 217649 - 217626 - T 100 -16 -4.68132 | gap 1, opp_overlap 217626 GAACATAGAAATAAA GGCGGC-CCGG ATA CCGGTGCCGCC TTTTTACTTTCGCCC TERM 176 217626 - 217649 + T 100 -16 -4.98531 | gap 1, opp_overlap 217626 GAACATAGAAATAAA GGCGGC-CCGG ATA CCGGTGCCGCC TTTTTACTTTCGCCC Rmet_6165 218469 - 217696 - | hypothetical protein Rmet_6166 219190 - 218573 - | hypothetical protein Rmet_6167 220292 - 219258 - | hypothetical protein Rmet_6168 220921 - 220289 - | sex pilus assembly and synthesis protein TERM 177 220973 - 220956 - R 89 -10.5 -4.53163 | opp_overlap 220955 220956 GTAGATAGCACAAAA CCGCGAC CTTG GCCGCGG CTTTCGATGCGCCAC Rmet_6169 221739 - 221023 - | protein-disulfide isomerase Rmet_6170 221969 - 222751 + | hypothetical protein Rmet_6171 223182 - 222748 - | putative transcriptional regulator MerR Rmet_6172 223254 - 223604 + | putative mercuric transport protein Rmet_6173 223617 - 223892 + | mercuric transport protein periplasmic protein Rmet_6174 223964 - 225649 + | putative mercuric reductase TERM 178 225678 - 225656 - f 81 -6.2 -4.82901 | overlap 225659 225673 GCCGGGTGAGAAAAA GGAGGTGTTC AAT GAACGCCTAC ACGGTGTCCCGGCTG Rmet_6175 225667 - 226032 + | transcriptional regulator MerD Rmet_6176 226029 - 226265 + | putative mercury resistance protein Rmet_6177 226262 - 227263 + | diguanylate phosphodiesterase TERM 179 227511 - 227537 + G 80 -15.2 -3.14132 | ATGCTGTCGGTAATG GGCGCGTTCG CCGAGTT CGAACGCGCC TTGATCCGCGAGCGG Rmet_6178 227256 - 227738 + | resolvase-like protein TERM 180 227857 - 227903 + G 76 -14.3 -3.10522 | gap 1, overlap 227897 CGACCTCTCCATCAT CCGGCAGCGGCGCGGCCCGGCC AACC GGCTGGGCTTCGCCG-TGCAGC TCTGTTACCTGCGCT TERM 181 229249 - 229223 - g 72 -10.9 -3.53012 | overlap 229240 GTGCCGCCCGCGAAA TTCGCCAGCCT CAAGC AGGCCAGCGAA TTGCCGCTGGCCGTG TERM 182 229261 - 229240 - g 71 -13.7 -2.72344 | overlap 229223 CGCCAGCCTCAAGCA GGCCAGCGA ATTG CCGCTGGCC GTGGCCACCGACTGC TERM 183 230400 - 230416 + G 71 -4.3 -4.57073 | opp_overlap 230384, overlap 230398 GCGAGGCGCGCAATG CGCTGGC CAG GGCAGTG TTTTTCAACCGCCTG TERM 184 230680 - 230712 + G 75 -3.4 -4.75954 | overlap 230682 CGCGGGCAAGTTCAG GC-CGCTACGACCGCT GCA ACCGG-CTTAGCGTGC TTTATTTTCCGTTTT Rmet_6179 227741 - 230707 + | transposase Tn3 TERM 185 231080 - 231062 - T 70 -4.4 -4.49556 | overlap 231063 GCGGGACGAAAGAAA TCGCGGCA ACC TGCCGGGC GTGAAGCGCGGAGAG Rmet_6180 231495 - 231118 - | general substrate transporter Rmet_6181 231631 - 232200 + | hypothetical protein Rmet_6182 232653 - 232318 - | hypothetical protein SEQUENCE gi|94152589|ref|NC_007972.1| Ralstonia metallidurans CH34 plasmid 2, complete sequence (length 171459) Rmet_6183 119 - 1804 + | putative mercuric reductase TERM 1 1833 - 1811 - f 81 -6.2 -4.82901 | overlap 1814 1828 GCCGGGTGAGAAAAA GGAGGTGTTC AAT GAACGCCTAC ACGGTGTCCCGGCTG Rmet_6184 1822 - 2187 + | transcriptional regulator MerD Rmet_6185 2184 - 2420 + | putative mercury resistance protein Rmet_6186 2417 - 3406 + | diguanylate phosphodiesterase Rmet_6187 3536 - 4096 + | resolvase-like protein TERM 2 5515 - 5499 - g 74 -2.2 -4.8048 | overlap 5501 GTCGGAGATGAAAAA CGCC CTGCGCTCC GGCG ACATCTGGGTGCAGG TERM 3 5607 - 5581 - g 72 -10.9 -3.55444 | overlap 5598 GTGCCACCCGCGAAA TTCGCCAGCCT CAAGC AGGCCAGCGAA TTGCCGCTGGCCGTG TERM 4 5619 - 5598 - g 71 -13.7 -2.72344 | overlap 5581 CGCCAGCCTCAAGCA GGCCAGCGA ATTG CCGCTGGCC GTGGCCACCGATTGC Rmet_6188 4099 - 7068 + | transposase Tn3 Rmet_6189 7125 - 7559 + | hypothetical protein Rmet_6190 7599 - 8657 + | hypothetical protein TERM 5 8798 - 8786 - g 79 -10.5 -4.16284 | overlap 8774 ACAGCGGCCAAGAAA CCGGC AGC GCCGG CGAAGAAGGCTGCAC TERM 6 8936 - 8925 - g 82 -5.8 -4.77567 | opp_overlap 8925 AGTTGGACAAGAAAA CCGT TCAG ACGG TGCTTGCCCATCTGG Rmet_6191 8741 - 9163 + | histone-like DNA-binding protein TERM 7 9182 - 9212 + F 84 -17 -2.71791 | opp_overlap 9187, overlap 9187 CGCTGCCTATCAAGC AAAAAGGCCTGGCA CAT TGCCAGGCCTTTTC ATTTGGAGCAGGGGT TERM 8 9187 - 9207 + F 100 -16.9 -4.54727 | opp_overlap 9187, overlap 9182 CCTATCAAGCAAAAA GGCCTGGCA CAT TGCCAGGCC TTTTCATTTGGAGCA TERM 9 9207 - 9187 - f 100 -16.9 -4.90266 | opp_overlap 9182 9187 CCTATCAAGCAAAAA GGCCTGGCA CAT TGCCAGGCC TTTTCATTTGGAGCA Rmet_6192 9528 - 10481 + | hypothetical protein TERM 10 10873 - 10927 + G 72 -11.5 -3.53012 | opp_overlap 10903 GCTGGTGGCAAATCC GTGGTTGGCTGCGCAC-AGTCACGC AGATCAC GCGTGGCTCGCGCGCA-CCGGCCGC TTTGCCCAGCCACAG TERM 11 10947 - 10991 + G 82 -6.2 -4.82901 | gap 1, opp_overlap 10956, overlap 10948 CCCAGCCACAGGCCG CCGCCAACACGCTGGGCGCCG TCGA CGACGCGCAG-GCGCTGGCGC TTTTTCTGCGCGACC TERM 12 11084 - 11094 + G 77 -4.6 -4.64766 | TGGTGCGGCACGCAT GGCT TCG GGCC TTTTTCGGATCTGAC Rmet_6193 10478 - 11965 + | phage integrase-like SAM-like Rmet_6194 13199 - 12153 - | hypothetical protein Rmet_6195 14142 - 13216 - | protein of unknown function LppY and LpqO Rmet_6196 15441 - 14200 - | major facilitator transporter TERM 13 15287 - 15274 - G 71 -4.5 -4.53303 | overlap 15275 15276 CAGTCCGACAGAAAA CTGGC CGAA GCCAA GCCCCAGCAGATACG Rmet_6197 15772 - 15464 - | hypothetical protein Rmet_6198 16151 - 15792 - | hypothetical protein Rmet_6199 16632 - 16210 - | hypothetical protein Rmet_6200 16970 - 16629 - | rhodanese-like protein Rmet_6201 17581 - 16988 - | manganese and iron superoxide dismutase Rmet_6202 18806 - 17601 - | chromate transporter Rmet_6203 19823 - 18849 - | putative chromate resistance signal peptide protein Rmet_6204 19978 - 20472 + | hypothetical protein TERM 14 20564 - 20532 - f 95 -19.1 -3.29144 | opp_overlap 20525 20522 20558 20563, overlap 20533 TGACTGCGGTCAGAA CCCTGGCGGCCGCGA CGT TGGCGGCCGCCAGGT AATGCCTGGCTTTGC TERM 15 20563 - 20533 - f 100 -22.6 -2.57344 | opp_overlap 20525 20522 20558, overlap 20532 GACTGCGGTCAGAAC CCTGGCGGCCGCGA CGT TGGCGGCCGCCAGG TAATGCCTGGCTTTG TERM 16 20558 - 20574 + F 80 -10.1 -4.10552 | opp_overlap 20533 20532, overlap 20525 20522 20563 GCGACGTTGGCGGCC GCCAGGT AAT GCCTGGC TTTGCTTTAGTGGCA Rmet_6205 20987 - 21274 + | hypothetical protein Rmet_6206 21271 - 21717 + | hypothetical protein Rmet_6207 21714 - 22289 + | ECF subfamily RNA polymerase sigma-24 factor TERM 17 23323 - 23285 - g 83 -15.2 -3.18681 | overlap 23286 CCGGAACGGCATCAA TGCCGCGGTTGAGCGGGT TGC AGCCGCCCAAGCGCGGCT TGACAGCGTCCGGCT TERM 18 23322 - 23286 - g 86 -18.7 -2.50994 | overlap 23285 CGGAACGGCATCAAT GCCGCGGTTGAGCGGGT TGC AGCCGCCCAAGCGCGGC TTGACAGCGTCCGGC Rmet_6208 22362 - 23618 + | outer membrane efflux protein Rmet_6209 23615 - 24802 + | membrane fusion protein cluster 2 Rmet_6210 24799 - 28029 + | heavy metal efflux pump CzcA Rmet_6211 28075 - 29130 + | hypothetical protein Rmet_6212 32160 - 29221 - | transposase Tn3 Rmet_6213 32803 - 32372 - | hypothetical protein Rmet_6214 33124 - 32882 - | hypothetical protein Rmet_6215 33161 - 33436 + | hypothetical protein TERM 19 33693 - 33665 - T 100 -14.6 -6.36459 | opp_overlap 33667, overlap 33667 GTCAACAAAAAAAAA GAGCCCCGACTC TCGAT GAGTCGGGGCTT CTCTTACATCAACAC TERM 20 33691 - 33667 - T 100 -17.2 -4.81831 | opp_overlap 33667, overlap 33665 CAACAAAAAAAAAGA GCCCCGACTC TCGAT GAGTCGGGGC TTCTCTTACATCAAC TERM 21 33667 - 33691 + T 100 -17.2 -3.68988 | opp_overlap 33667 33665 CAACAAAAAAAAAGA GCCCCGACTC TCGAT GAGTCGGGGC TTCTCTTACATCAAC Rmet_6216 35192 - 33702 - | hypothetical protein TERM 22 34228 - 34200 - G 71 -7.3 -4.1822 | opp_overlap 34226, overlap 34216 CCCTACGTGAAGAAA TCGCGCGGTCG GAATAGG CGTCGGCGCGA CTTCAGGCACATCCG TERM 23 34803 - 34785 - G 72 -6.6 -4.24002 | overlap 34778 TTCGAAATCCGAAAA GCCCGGCA AAG CACCGGAC CCATAGAGGGCGACC TERM 24 35508 - 35488 - R 76 -14.7 -2.52543 | opp_overlap 35483, overlap 35492 35493 ATGGTCCTGAATGGA CCAACGCCC AAC GGGCGCTGG TCCCGTTGGGTTGGA TERM 25 35550 - 35533 - R 89 -12.7 -4.0825 | opp_overlap 35533 35532 GTTGGAAGGAAAGAA GCCTGCG ATGA CGCAGGC GTTATGAGACGTGCT Rmet_6217 35863 - 35579 - | hypothetical protein TERM 26 36130 - 36106 - R 100 -15 -5.23292 | GGAGACAAAAGAAAA GCCCGCTCCC TTTCG GGAAGCGGGC ATACGGTTAATGAAT TERM 27 36204 - 36180 - R 79 -14.3 -2.91274 | GCCAGCGCAACGACA TCGATGACGCC GTC GGCGTCGTCGA CCAGGTCAGGAGTCT Rmet_6218 38428 - 36155 - | putative ATPase involved in DNA repair Rmet_6219 38982 - 38467 - | hypothetical protein TERM 28 39130 - 39094 - R 84 -11.6 -4.07568 | opp_overlap 39085 39093 39094 GTGGCGCCGGTAAAA CCAGATTTCGACAGCC TCGCG GGCTGTCGGAACATGG CTTTCGCATGTTCTA Rmet_6220 40609 - 39161 - | DNA repair exonuclease-like protein TERM 29 40677 - 40658 - R 95 -11.4 -4.67968 | GCAAGAAAGAAGAAA GGGAAGCC CATG GGCTCCCC TCAACTGCCGGCACA Rmet_6221 41959 - 40706 - | hypothetical protein TERM 30 41260 - 41299 + g 76 -6.2 -4.57073 | TGGCGCCTACGAGCC GCCCTCGCGCCATTGC CACGGTCT GCATAGCCGCGTGGGC TTTTTGCAGGACGTA TERM 31 41674 - 41664 - G 72 -8.2 -4.16681 | opp_overlap 41661 AAGACCACGGGAAAA CGCC AGA GGCG ATGTCCGTTGCCGTC TERM 32 41948 - 41968 + g 73 -11.8 -3.30159 | opp_overlap 41947 GATCTTGCCAATGAT GGGCGGCC GCATG GGCCGCTC TTCTAGCAGGCTTCG Rmet_6222 42480 - 41971 - | hypothetical protein TERM 33 42352 - 42324 - G 100 -8.1 -6.02919 | gap 1, opp_overlap 42324 CCAGAAACAAAAAAA GCCCGCC-CCGG TTTGCG CCGGCAGCGAGC TTTGATGTCAGGAAC TERM 34 42406 - 42367 - G 100 -22.3 -3.16564 | gap 1, opp_overlap 42405 CTTTGATGTCAGGAA CCCGAACTGCCACGCCCC TTCCG GGGGCGTGGCA-CTCGGG GAGCGGCGCACTAGT Rmet_6223 42929 - 43495 + | hypothetical protein Rmet_6224 43482 - 44120 + | hypothetical protein Rmet_6225 44132 - 44551 + | hypothetical protein TERM 35 44644 - 44619 - T 100 -20.5 -4.78848 | opp_overlap 44619 CTTTCAAAGACAAAA GGCCCGGCAAC GTCA GTTGCCGGGCC TTCTTGTTTAATAGA TERM 36 44619 - 44644 + T 100 -20.5 -4.12603 | opp_overlap 44619 CTTTCAAAGACAAAA GGCCCGGCAAC GTCA GTTGCCGGGCC TTCTTGTTTAATAGA Rmet_6226 45173 - 44652 - | hypothetical protein TERM 37 45202 - 45183 - R 100 -12.1 -5.83211 | opp_overlap 45183 GAGCAAAAGAAAAAA GCCCCGG GCTGTG CCGGGGC TTTAAGACCTGAAAC TERM 38 45183 - 45202 + r 79 -12.1 -3.55444 | opp_overlap 45183 GAGCAAAAGAAAAAA GCCCCGG GCTGTG CCGGGGC TTTAAGACCTGAAAC TERM 39 45263 - 45210 - R 72 -12.6 -3.01712 | gap 1, overlap 45217 GCCGGGGCTTTAAGA CCTGAAACGA-CCACTCCATTACCA AACAA CGGCAACGGAGCGGCTCGCTTGAGG GCGGATAGAAGAGAC TERM 40 45256 - 45217 - R 73 -10.1 -3.66803 | gap 1, overlap 45210 CTTTAAGACCTGAAA CGA-CCACTCCATTACCA AACAA CGGCAACGGAGCGGCTCG CTTGAGGGCGGATAG Rmet_6227 46265 - 45291 - | hypothetical protein TERM 41 46471 - 46502 + r 74 -11.7 -3.54424 | gap 2, opp_overlap 46460 AAGATGCCCACGGAG CCGTCCCGACAGGGA ATGC TCCCTGT-GGG-CGG TTTCAAGAGATGGCC TERM 42 46597 - 46562 - R 76 -9.2 -4.09243 | opp_overlap 46561 GAGACGCGGGTAAAA CTTTGTTTGGACTGAA CGTA TTCACTGCAAACAAAG CTCTGGTGGTACGGG TERM 43 46710 - 46681 - R 86 -13.5 -3.48063 | overlap 46674 46683 46684 TAGCCAAATCGAGAA TATCCCCCAGCCG GATT CGGCTGGGGGCAA ACAATCAAGCGGTCA TERM 44 46708 - 46683 - R 89 -16.1 -3.30797 | overlap 46681 46674 46684 GCCAAATCGAGAATA TCCCCCAGCCG GATT CGGCTGGGGGC AAACAATCAAGCGGT TERM 45 46707 - 46684 - R 88 -19.6 -2.57996 | overlap 46683 46681 46674 CCAAATCGAGAATAT CCCCCAGCCG GATT CGGCTGGGGG CAAACAATCAAGCGG Rmet_6228 48265 - 46715 - | hypothetical protein TERM 46 46983 - 46996 + g 73 -9.5 -3.93583 | GCCATCGAACGTTCA GCGCG CTTG CGCGC TTTGTCGATGGCTTC Rmet_6229 48684 - 48331 - | hypothetical protein Rmet_6230 49134 - 48742 - | hypothetical protein TERM 47 49220 - 49203 - R 100 -9.1 -5.46698 | GGGAAAACGAAAAAA CGCACCC CGAG AGGTGCG TTCAAGCGGTGAGCC Rmet_6231 49848 - 49378 - | hypothetical protein Rmet_6232 50385 - 49861 - | hypothetical protein TERM 48 50295 - 50263 - G 73 -14.1 -2.8294 | opp_overlap 50261 50271 50276, overlap 50260 TATCCTGGATAAGGA CGGGACATCCTTCCC CAC GGGACGGTTGTCCCA GCTGGGTTGGTAGTC TERM 49 50389 - 50355 - G 93 -17.3 -3.54307 | gap 1, opp_overlap 50380, overlap 50356 50359 AAGACGCGGGTGAAA GCGACTTGCCCAAGCC TCGG GGCTTGGGCAAGCC-C TCTCGGGCTTGCGAT TERM 50 50389 - 50356 - G 84 -17.5 -2.72263 | opp_overlap 50380, overlap 50355 50359 AGACGCGGGTGAAAG CGACTTGCCCAAGCC TCGG GGCTTGGGCAAGCCC TCTCGGGCTTGCGAT TERM 51 50386 - 50359 - G 91 -20 -2.64155 | opp_overlap 50380, overlap 50355 50356 CGCGGGTGAAAGCGA CTTGCCCAAGCC TCGG GGCTTGGGCAAG CCCTCTCGGGCTTGC Rmet_6233 50940 - 50467 - | putative outer membrane lipoprotein transmembrane TERM 52 50995 - 50960 - R 100 -11.8 -5.40072 | overlap 50963 50972 GCCTCTTCAAAAAAA TAAGGGCCAACATGCC TACG GGCAGGGTGGCCCGTA GGTGGGAGAAAAACA TERM 53 50992 - 50963 - R 100 -13.5 -4.79949 | overlap 50960 50972 TCTTCAAAAAAATAA GGGCCAACATGCC TACG GGCAGGGTGGCCC GTAGGTGGGAGAAAA Rmet_6234 52126 - 51422 - | hypothetical protein TERM 54 52317 - 52291 - R 100 -15.2 -5.79595 | opp_overlap 52289 52291 GCGCAAAAGAAAAAA GCCACTCCCGAC GAA ATCGGGAATGGC TGTTTAAACAGACTG TERM 55 52291 - 52317 + r 76 -12.3 -3.34715 | opp_overlap 52291, overlap 52289 GCGCAAAAGAAAAAA GCCACTCCCGA CGAAA TCGGGAATGGC TGTTTAAACAGACTG Rmet_6235 53124 - 52321 - | UBA/THIF-type NAD/FAD binding fold TERM 56 52807 - 52749 - G 93 -17.4 -3.36327 | overlap 52721 52804 GCATGGCACCGACAA TCGCCTTGCGCGCGGCACGGCTATCGAC GCA GCCGATCACCATGTCGCACACGAAGCGA TCTCCCGACCCGACG Rmet_6236 53762 - 53121 - | hypothetical protein Rmet_6237 54484 - 53765 - | hypothetical protein TERM 57 54447 - 54430 - G 88 -9.1 -4.61873 | CCCCATAAAGCAAAA TGGCCCC TTGG AGGGCCA CGTCATGCGACCGCG Rmet_6238 55633 - 54494 - | hypothetical protein TERM 58 55677 - 55662 - R 100 -11.8 -5.55698 | opp_overlap 55661 55662 CAGAATGTAAAAAAA CCGCCC TCTC GGGCGG CTTCGTAGTGGAAGA Rmet_6239 55948 - 55724 - | hypothetical protein Rmet_6240 56477 - 55959 - | hypothetical protein TERM 59 56478 - 56456 - G 73 -12 -3.32293 | overlap 56454 56452 GGAAATGGAAAGACA GATAGGCGCC ATG AGCGCCCATC CAAACTGTGAAGAGT Rmet_6241 58227 - 56503 - | ParB family protein TERM 60 57575 - 57599 + g 73 -13.6 -2.86661 | overlap 57573 57569 TCGAAGATGGCCTTC TCGAGGCTGC ACGCG GCGGCCTCGA TGGTCTTCTTCAATT TERM 61 58245 - 58208 - G 78 -13.5 -3.53012 | gap 1, opp_overlap 58217 TGGGTTCTCGCGAAA TGGGGAACC-CGTTGCCG CAC CGGGAACGTGGTTCCCGA TGGGATGGAAGGATG TERM 62 59210 - 59235 + G 79 -2.5 -5.02323 | gap 1, overlap 59211 GTGGGATGGGTTGTA TGCTGACTGTCA GTA TGGCGG-CGGCG TTTTATTTCTCGTCC Rmet_6242 58836 - 59255 + | hypothetical protein TERM 63 59359 - 59341 - T 100 -11.7 -6.13 | AGATTCAAAAAAAAA GCCCCTC ACAAG GAGGGGC TGGTAGGAACGGGTC Rmet_6243 60373 - 59480 - | hypothetical protein TERM 64 59806 - 59826 + g 80 -15.5 -2.84955 | opp_overlap 59777, overlap 59784 ACCGCGGATCGATAT CGATGCACG TGG CGTGCATCG TCTGCTGGTAATTGT Rmet_6244 60994 - 60515 - | hypothetical protein Rmet_6245 61334 - 61098 - | hypothetical protein Rmet_6246 62147 - 61464 - | hypothetical protein TERM 65 61626 - 61637 + gH 70 -2.2 -4.59773 | TTCGGGAAGCCGGCC GTCA GCTT TGGC TTTTTCCCGCTGCAG TERM 66 62028 - 62042 + gH 79 -7 -4.4715 | opp_overlap 62004 AATTCTATCCCTTTC GCGGCC TAC GCCCGC TTTTCTGCCTTGAAA Rmet_6247 62146 - 62595 + | hypothetical protein Rmet_6248 62592 - 64052 + | putative DNA helicase Rmet_6249 64064 - 65290 + | hypothetical protein Rmet_6250 65277 - 65645 + | hypothetical protein Rmet_6251 65709 - 66026 + | hypothetical protein TERM 67 66293 - 66309 + F 85 -2.2 -5.43866 | opp_overlap 66285 66276 CCACAAATCCTCAGA CTGATG GACCG CAGCAG TTTTTTTGGCACTTA Rmet_6252 66425 - 67570 + | phage integrase-like SAM-like Rmet_6253 67545 - 69203 + | phage integrase Rmet_6254 69263 - 71113 + | phage integrase Rmet_6255 71110 - 71610 + | hypothetical protein TERM 68 71632 - 71648 + T 71 -9.5 -3.83026 | CGTCCCCTTTGTATT TCGATCA GGC TGATCGA TTTGCTCTGCCACAC Rmet_6256 73357 - 71912 - | hypothetical protein Rmet_6257 77778 - 73354 - | hypothetical protein Rmet_6258 78447 - 79976 + | YD repeat-containing protein Rmet_6259 80736 - 79981 - | IstB-like ATP-binding protein Rmet_6260 82297 - 80744 - | integrase catalytic subunit TERM 69 83536 - 83511 - g 71 -11.9 -3.23447 | gap 1, overlap 83509 83512 TGAATGGTGACAAGA CGCC-TGGCCAG TGG CTGGCCATGGCA ACCCAGCGTGCCGTC Rmet_6261 82727 - 83926 + | YD repeat-containing protein Rmet_6262 84957 - 84265 - | alpha/beta hydrolase TERM 70 86244 - 86231 - g 74 -2.3 -4.82901 | overlap 86232 CTGCGCGTACAAAAA GCCAA TGGT TGGGC AACGTCGCTGACATA TERM 71 86503 - 86485 - g 70 -5.9 -4.32034 | overlap 86487 GTATCACTACGAAAA CTCCCAG TACCG CTGGGCG CTGACGGGCATCACT Rmet_6263 85271 - 88090 + | YD repeat-containing protein TERM 72 88086 - 88070 - f 77 -3.6 -4.88067 | ATTGAGGTACAAAAA GGCATG GCTTT CGTGCC GTAAAGGGGGAACAG TERM 73 88477 - 88438 - f 71 -8.5 -4.07687 | ACGTTTGTCGCAAAA GGTCCAGTGGCTGGG ATTGGCCGGA CCCAGCCACCTGGCC AGCAGTCAGTGAATG TERM 74 88992 - 89030 + G 78 -14.4 -3.29461 | overlap 88982 88994 TGGAACGCTGCCCAC GCCGCGTTCGCTGCGGTC CAC GGCCGCCGCCAGCGCGTC TTCTGCGCGAGCTTG TERM 75 88994 - 89028 + G 86 -15.6 -3.21395 | overlap 88982 88992 GAACGCTGCCCACGC CGCGTTCGCTGCGGTC CAC GGCCGCCGCCAGCGCG TCTTCTGCGCGAGCT Rmet_6264 88734 - 89744 + | phage Gp37Gp68 TERM 76 89952 - 89981 + G 84 -13.6 -3.59979 | CAATACGCGCGCGGT GCCGCCGAACTG TTCCGC CAGTTCGACGGC TTTCAGATGCACCCG Rmet_6265 89790 - 90032 + | hypothetical protein Rmet_6266 90029 - 90274 + | hypothetical protein Rmet_6267 90369 - 90959 + | hypothetical protein Rmet_6268 90989 - 91903 + | DNA/RNA non-specific endonuclease TERM 77 91971 - 91939 - T 100 -16.4 -5.00616 | gap 1, opp_overlap 91940 91941 91946, overlap 91941 GTTCCTTTCAAAAAA GACGAAAGGCGCGCC TTTT GACGCGCCTTTCG-C TTTCATACTGGCCGA TERM 78 91940 - 91971 + T 93 -14.4 -3.78775 | opp_overlap 91939 91941, overlap 91941 91946 TTCCTTTCAAAAAAG ACGAAAGGCGCGCC TTTT GACGCGCCTTTCGC TTTCATACTGGCCGA TERM 79 91970 - 91941 - T 100 -20.1 -4.13561 | opp_overlap 91940 91941 91946, overlap 91939 TCCTTTCAAAAAAGA CGAAAGGCGCGCC TTTT GACGCGCCTTTCG CTTTCATACTGGCCG TERM 80 91941 - 91970 + T 86 -17.9 -2.87051 | opp_overlap 91941 91939, overlap 91940 91946 TCCTTTCAAAAAAGA CGAAAGGCGCGCC TTTT GACGCGCCTTTCG CTTTCATACTGGCCG TERM 81 91946 - 91965 + T 78 -10.6 -3.87551 | opp_overlap 91941 91939, overlap 91941 91940 TCAAAAAAGACGAAA GGCGCGCC TTTT GACGCGCC TTTCGCTTTCATACT Rmet_6269 92788 - 91994 - | hypothetical protein Rmet_6270 92906 - 93562 + | hypothetical protein Rmet_6271 93681 - 94427 + | hypothetical protein TERM 82 94824 - 94845 + T 84 -11.5 -4.08216 | CACTTCTCCCCTCAA GCCTCGGTG TCGG CGCCGGGGC TTTTGCCCACCATCA Rmet_6272 95956 - 94820 - | hypothetical protein TERM 83 94916 - 94928 + g 75 -9.1 -3.98114 | opp_overlap 94895 CTCGGTATCGAGCTC GCACC ACG GGTGC TTGTTGTCTTCAGTT TERM 84 95501 - 95483 - G 70 -5.9 -4.27316 | overlap 95486 CTCGTCAATGGAAAA CCACGAC CGGCT GACGTGG TGCGGTCGATGAAAG Rmet_6273 97724 - 96570 - | helix-turn-helix, Fis-type TERM 85 96631 - 96641 + g 72 -8.2 -4.1822 | overlap 96629 ATGCCCAATGCCTTC GCCG CAG CGGC TTTGTTACCGTCGGC TERM 86 98434 - 98417 - g 100 -5.5 -5.81412 | TTGATTGAAAAAAAA GCCGG TGCAATTT CCGGC ATGAACAGTGAGCCC Rmet_6274 98291 - 98533 + | hypothetical protein TERM 87 98740 - 98692 - f 70 -10.5 -3.54424 | gap 1 TGGGACTTGGGCAAA TCAAGTGCCACCATGTGCCA TCAAAGTCCT CGG-ACATGGTGGCACTAGA TAGGACATGGCGCCG Rmet_6275 98853 - 99878 + | hypothetical protein TERM 88 100529 - 100551 + T 100 -12 -5.29846 | opp_overlap 100530, overlap 100530 CGCCACAAAAAAAAA ACCCAGCGAT ATG ATCGCTGGGC TTTTTGTTTAAGGTT TERM 89 100530 - 100550 + T 95 -15.5 -3.76281 | opp_overlap 100530, overlap 100529 GCCACAAAAAAAAAA CCCAGCGAT ATG ATCGCTGGG CTTTTTGTTTAAGGT TERM 90 100550 - 100530 - T 100 -15.5 -6.48081 | opp_overlap 100530 100529 GCCACAAAAAAAAAA CCCAGCGAT ATG ATCGCTGGG CTTTTTGTTTAAGGT Rmet_6276 100843 - 100577 - | hypothetical protein TERM 91 100851 - 100821 - G 78 -14.1 -3.23452 | gap 1, overlap 100816 ACTGCCACAAGGGAA TCCGCCCCTGTGGG CGAA CCCACAGGG-CAGA AATTGAGGCTTGCCG TERM 92 100903 - 100886 - R 81 -7.7 -4.63218 | gap 1, overlap 100887 100889 TGCGGCGGAAGAAAA CTAGGCGG CGA CCGCCT-G CTGCGAGATCTCGCG Rmet_6277 101953 - 100886 - | Phage P4 alpha, zinc-binding TERM 93 101841 - 101807 - G 82 -7.1 -4.63218 | gap 1 TCTGGTGTAAGAAAA CCGGTCCTTGCCGCCA CATA TCG-GGCAGGGACCAG GGCGACCGCGCCAGA TERM 94 102059 - 102008 - R 89 -15.4 -3.37901 | gap 1, opp_overlap 102021, overlap 101996 102021 AAACAGGCGAAGGAA CGCT-TGCTCAAAAGACATCCCGGT TTA ACCAGAAGGTCTTTTCAGCATAGCG TCATGCGTAGGTGGA TERM 95 102152 - 102115 - R 89 -17.9 -2.99545 | gap 1, overlap 102097 CGCAGACAGGAGAGA TGCCGCTACTTCTGCCGG ATT CCGGCAGAAGTAG-GGAA AATATGCACGACACA Rmet_6278 102791 - 102219 - | single-strand DNA-binding protein Rmet_6279 103585 - 102803 - | hypothetical protein TERM 96 102870 - 102888 + g 74 -10.2 -3.74693 | opp_overlap 102874 CCTGTTGTTCGATCA CGAAGGGG CTG CCCCGTCG TTTGGTCGAATGCAG Rmet_6280 104024 - 103593 - | hypothetical protein TERM 97 104091 - 104052 - R 100 -22.4 -3.07222 | gap 1, overlap 104027 104077 ACGAGTATCCGAAGA CCCACCTGTCGGCGGGTAT CGA ATACCCGC-GACAGGTGGA ATGAGGCCGCCCAGA Rmet_6281 104431 - 104123 - | hypothetical protein TERM 98 104565 - 104531 - R 76 -12.2 -3.40899 | opp_overlap 104532, overlap 104518 AAGCGCGCATCACAA CGCGCTTAAGGCATGC AAT GCATGTCTTAAAGGCG CTATCTATGTGCGGC TERM 99 104786 - 104797 + r 73 -4.4 -4.6635 | opp_overlap 104786 TCGCCCATTTTGAAA GGAA CATG TTCC TTTTCTTCGCCCTTT Rmet_6282 106152 - 105133 - | integrase catalytic subunit TERM 100 106045 - 106083 + g 70 -10.9 -3.42056 | gap 1, overlap 106047 106048 CAGTGTCGAAGGCGC GCGGCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GACATC TTCTGCCTTCCAAAT TERM 101 106047 - 106081 + g 71 -12.1 -3.281 | gap 1, overlap 106045 106048 GTGTCGAAGGCGCGC GGCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GACA TCTTCTGCCTTCCAA TERM 102 106048 - 106080 + g 77 -15.6 -2.56539 | gap 1, overlap 106047 106045 TGTCGAAGGCGCGCG GCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GAC ATCTTCTGCCTTCCA TERM 103 107024 - 107014 - g 70 -4.6 -4.43844 | TGACCACCGAGAAAA CCGC ACT GCAG AAGACCCTCGCTGAA Rmet_6283 106227 - 107405 + | hypothetical protein Rmet_6284 107407 - 108585 + | hypothetical protein TERM 104 108709 - 108738 + G 100 -3.5 -5.5604 | GAAAGGAGAAACGTT CGAAATGGGCG TGGACGGT CGCCTGCTTCG TTTTTTCTTGGTTCG Rmet_6285 108627 - 108959 + | hypothetical protein Rmet_6286 109061 - 109258 + | hypothetical protein Rmet_6287 109356 - 110177 + | putative lipoprotein transmembrane TERM 105 110199 - 110223 + T 100 -18.7 -5.26316 | opp_overlap 110199 110201 GTAGCTCGTAGTAGA TATCGGCCAGC CAT GCTGGCCGATA TTTTTTGTCCGCTAG TERM 106 110223 - 110199 - T 86 -18.7 -2.78816 | opp_overlap 110199, overlap 110201 GTAGCTCGTAGTAGA TATCGGCCAGC CAT GCTGGCCGATA TTTTTTGTCCGCTAG TERM 107 110221 - 110201 - T 85 -16.9 -2.94218 | opp_overlap 110199, overlap 110199 AGCTCGTAGTAGATA TCGGCCAGC CAT GCTGGCCGA TATTTTTTGTCCGCT Rmet_6288 111455 - 110235 - | hypothetical protein TERM 108 111495 - 111477 - R 100 -17.4 -3.59979 | opp_overlap 111475 CTCTCCTATGCCAAA GCCCGGCC AAC GGCCGGGC AGTCTATCCGCGCGT Rmet_6289 112153 - 111521 - | hypothetical protein Rmet_6290 113405 - 112170 - | Type II secretory pathway component PulF-like protein Rmet_6291 115219 - 113402 - | type II secretion system protein E TERM 109 115145 - 115088 - G 84 -17.5 -2.66272 | overlap 115085 GGGCAGTGAAAGGGA GGGTTCGGCGTGCACGGGCGCCGCG GCGACCTG CGCCGTGCCCGCGCGAGCCGCACCC GCGCCGGATATGACC TERM 110 115180 - 115193 + g 75 -3.7 -4.59853 | overlap 115181 TTCCGCCGGCGGCCT CGGGC ACCA GCCCC TTTTTGGAGCGTTCA Rmet_6292 115865 - 115230 - | hypothetical protein Rmet_6293 117226 - 115862 - | hypothetical protein Rmet_6294 119096 - 117294 - | hypothetical protein Rmet_6295 119695 - 119108 - | hypothetical protein Rmet_6296 120146 - 119724 - | lytic transglycosylase, catalytic Rmet_6297 121369 - 120143 - | hypothetical protein Rmet_6298 122163 - 121366 - | hypothetical protein Rmet_6299 123400 - 122156 - | conjugation TrbI-like protein Rmet_6300 124311 - 123400 - | conjugal transfer protein TrbG/VirB9/CagX TERM 111 123844 - 123831 - G 81 -3.1 -5.00616 | gap 1, overlap 123832 123833 CCTTTTGGTAAAAAA TGCCGC CGA GCGG-A GACGATACGAGCGTG TERM 112 124203 - 124213 + g 84 -6.8 -4.82901 | overlap 124192 CCATGCCGGCGCCGG TGCG ACG CGCA TTTTTGTCGGCCGCA Rmet_6301 125036 - 124329 - | hypothetical protein TERM 113 124374 - 124361 - G 71 -8.1 -4.17355 | GAATGCTAAAAAAGA TGGGG TACA CCCCA AACGGGTTGGTACCG Rmet_6302 125435 - 126484 + | type II secretion system protein E Rmet_6303 126504 - 126851 + | hypothetical protein Rmet_6304 126853 - 127182 + | hypothetical protein Rmet_6305 127176 - 129632 + | Type IV secretory pathway VirB4 components-like protein Rmet_6306 129649 - 130407 + | hypothetical protein TERM 114 130912 - 130883 - g 73 -5.8 -4.37092 | gap 1, opp_overlap 130897 130906, overlap 130897 ATCTCGCCGACAAAA TCGCAGGCACACA AGCGA TGT-CACCTGCGA TGACGCTCGCTTCCG Rmet_6307 130420 - 131472 + | hypothetical protein Rmet_6308 131472 - 132713 + | hypothetical protein TERM 115 133649 - 133660 + G 79 -7.2 -4.56597 | overlap 133639 133638 AACCTGCTCGAGCGT GCGC TTCA GCGC TTTTTCCCCGAAGCC Rmet_6309 132710 - 134578 + | hypothetical protein TERM 116 134790 - 134748 - g 76 -6.2 -4.49556 | gap 1 CTTTGATCAAAGAAA TGCTGACGGACGGCATCGC AGCATG GCG-CGCCGCGCGCAAGCA TGGTGATCCGTCTGT Rmet_6310 134585 - 135091 + | hypothetical protein Rmet_6311 135081 - 135362 + | hypothetical protein Rmet_6312 135366 - 135983 + | hypothetical protein Rmet_6313 135970 - 136872 + | hypothetical protein TERM 117 137407 - 137390 - g 81 -3.3 -5.0538 | TCCTACGGCAAAAAA GCGGCTG GTCG CAGGCAC CTTTCACTCACTCGC Rmet_6314 137151 - 138890 + | UvrD/REP helicase TERM 118 139353 - 139340 - g 71 -3.7 -4.56597 | CCGGTCCCTCAAAAA GGGGG ATCT CCCTC AGGGCCAGCAATCGC Rmet_6315 139137 - 140327 + | cobyrinic acid a,c-diamide synthase TERM 119 140917 - 140927 + G 74 -5.4 -4.5442 | overlap 140916 TGTACCTGTCTCGAC TCTC TCA GAGA TTTTGTCGTTCCGGA Rmet_6316 140324 - 141322 + | ParB family protein TERM 120 141427 - 141396 - f 100 -19.6 -4.87786 | opp_overlap 141401, overlap 141401 GTAATCCTACAAAAA CAAAAGCCCACGGC GGCA ACCGTGGGCTTTTG AGAACTTCAAGCTGA TERM 121 141422 - 141401 - f 100 -13.7 -5.35224 | opp_overlap 141401, overlap 141396 CCTACAAAAACAAAA GCCCACGGC GGCA ACCGTGGGC TTTTGAGAACTTCAA TERM 122 141401 - 141422 + F 89 -13 -4.11484 | opp_overlap 141396 141401 CCTACAAAAACAAAA GCCCACGG CGGCAA CCGTGGGC TTTTGAGAACTTCAA Rmet_6317 141561 - 142739 + | hypothetical protein TERM 123 143079 - 143094 + F 71 -7.6 -4.07687 | CGTTACCCTGGAACT TGCCTA CCAC TAGGCA TTTTCGCGGCCCGCT TERM 124 143972 - 143954 - g 81 -3 -5.00138 | overlap 143955 CATGGAAACGAAAAA CCGACCCG TTC CGAATCGC AGGATCACTTACAAA TERM 125 144348 - 144333 - g 73 -11.8 -3.39895 | opp_overlap 144330 CGCGCGATCAACGAA GCCCGC TTGA GCGGGC AGCTGTATGCACTGG Rmet_6318 143802 - 144620 + | hypothetical protein TERM 126 144631 - 144669 + G 84 -14.4 -3.64822 | overlap 144632 CTTGATGCCGGTGCT GACAGCGGAGGCGCTGGG TTG CCCGGTGCCTCCGCAGGA TTTGGCTGCCCGCGT TERM 127 144632 - 144668 + G 87 -17.9 -2.78679 | overlap 144631 TTGATGCCGGTGCTG ACAGCGGAGGCGCTGGG TTG CCCGGTGCCTCCGCAGG ATTTGGCTGCCCGCG Rmet_6319 144620 - 145276 + | hypothetical protein Rmet_6320 146503 - 145307 - | phage integrase TERM 128 146056 - 146009 - G 80 -14.6 -3.14132 | overlap 145981 CTCGGCCTCTAGGAA GCGGCGCTGCGAGCCTGGCCCG CGCG CCGACCGAGCGCGCGGCACCGC CTGGAACGGATTCAC TERM 129 146904 - 146951 + G 71 -14 -2.70932 | gap 1 ACCGGCGCCTGCTCG CCGCCGCCGGCGTC-GCCCGGTC GCC GAGCGGCCAGACCGTGGCGGCGG TGATTGCCGAGCGCA TERM 130 147125 - 147069 - g 89 -15 -3.72576 | opp_overlap 147081 TCGCGCTGGACGAAA CCGGCGCGGGC-GCGCCGCGCTTGGCCG TGC CGG-CAACCGCGGCGTTGTCAGCGACGG GCGGCAATACGGTGG TERM 131 147081 - 147112 + G 89 -16.6 -3.28712 | gap 1, opp_overlap 147069 AAACCGGCGCGGGCG CGCCGCGCTTGGCCG TGC CGG-CAACCGCGGCG TTGTCAGCGACGGGC TERM 132 147243 - 147211 - g 88 -8.3 -4.71426 | GCTCGAGGAAGAAAA TCGGCAGTTGCGGGA GCG TGCGGCCACCGCCGA GGCATCCAGCCGGGC TERM 133 147314 - 147272 - g 83 -14.7 -3.21099 | gap 1 GCGGCGCAGGACGAA GCGGCATCCGCGCAGGCGGC GCTT GCCGCC-GCGCGGGCGGCCC TGGCCGACAAGGAGG Rmet_6321 146729 - 147559 + | hypothetical protein TERM 134 147637 - 147658 + F 72 -10.9 -3.30203 | gap 1, overlap 147631 GGGCAGTCTGCTGGT TCCTGGGCGG CAG CCGCC-AGGA TTCGCTTCTTGATAA Rmet_6322 147915 - 148304 + | hypothetical protein Rmet_6323 148379 - 149008 + | hypothetical protein TERM 135 149234 - 149249 + F 100 -10.4 -5.5112 | opp_overlap 149234 CGCTCTAGCGGACAA GCCTCC TTCG GGAGGC TTTTTTGTTGGTAAG Rmet_6324 149305 - 150114 + | hypothetical protein Rmet_6325 150163 - 151602 + | hypothetical protein TERM 136 151634 - 151624 - T 78 -2.4 -5.1356 | CCGCACGAAGAAAAA GGCC TCT GGGC ACGACGCTGTACAGT Rmet_6326 155470 - 151667 - | hypothetical protein TERM 137 152554 - 152544 - G 100 -8.2 -5.14563 | overlap 152545 CTGTCGACCAAAAAA GCCG ACT CGGC GAGCCGGGCGGCCGC TERM 138 152561 - 152545 - G 71 -10.1 -3.68256 | overlap 152544 TGTCGACCAAAAAAG CCGACTC GGC GAGCCGG GCGGCCGCACTGTCC TERM 139 154386 - 154376 - G 74 -4.6 -4.53857 | ATCAAAAACAAACAA CCAC TCT GCGG GGATCGGAACTTGCG TERM 140 156085 - 156097 + G 72 -6.9 -4.20516 | overlap 156081 CGTTGGAAGCTGCGG CGCGG ACG CTGCG TTTCTTGGCTGCGAC Rmet_6327 155667 - 156935 + | hypothetical protein Rmet_6328 157010 - 157282 + | hypothetical protein Rmet_6329 158339 - 157293 - | HNH nuclease TERM 141 157770 - 157785 + g 70 -2.4 -4.64598 | opp_overlap 157767, overlap 157781 GTCCTTCAGATACAG CGTTGG GCTG CCGCCG TTTTTGGCGTGGTTC Rmet_6330 158535 - 158900 + | hypothetical protein TERM 142 159670 - 159655 - g 75 -10.4 -3.9122 | TATGGCGTGAAAGAA GCTCGC TGGC GCGAGC TCGTCGACATGCCCG Rmet_6331 158914 - 160053 + | hypothetical protein Rmet_6332 160461 - 160111 - | hypothetical protein TERM 143 160593 - 160615 + H 71 -6.9 -4.1899 | GTTGATTTGCGCGTG CGTGGAGGC ATGGG GTCTCCTCG TTTTCAGTGCAATAA Rmet_6333 160749 - 161396 + | transposase Tn3 Rmet_6334 161498 - 162067 + | hypothetical protein Rmet_6335 162179 - 163618 + | integrase catalytic subunit Rmet_6336 163615 - 164448 + | ATPase Rmet_6337 164502 - 164717 + | hypothetical protein TERM 144 164726 - 164748 + F 90 -19.2 -3.07816 | opp_overlap 164726 164729, overlap 164729 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 145 164748 - 164726 - f 91 -19.2 -3.18264 | opp_overlap 164726 164729, overlap 164729 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 146 164745 - 164729 - f 93 -15.1 -3.73647 | opp_overlap 164726 164729, overlap 164726 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC TERM 147 164729 - 164745 + F 90 -15.1 -3.68569 | opp_overlap 164729 164726, overlap 164726 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC TERM 148 166454 - 166442 - g 88 -9.1 -4.63932 | opp_overlap 166442 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 149 166777 - 166790 + G 70 -2.3 -4.67353 | overlap 166778 166788 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Rmet_6338 164757 - 167186 + | transposase Tn3 Rmet_6339 168227 - 167745 - | cupin 2, barrel TERM 150 168178 - 168222 + g 80 -15 -3.14881 | gap 2, opp_overlap 168179 168189, overlap 168179 CTACGTTGCCGATAA C-CGG-CCCGAAACGGCGGCGC AAC GCGCCGCTGTTGGGGGTCCGTG TTCATCGGCGGGTTA TERM 151 168220 - 168179 - G 81 -16.5 -2.57344 | gap 1, opp_overlap 168178 168179, overlap 168189 TACGTTGCCGATAAC CGG-CCCGAAACGGCGGCGC AAC GCGCCGCTGTTGGGGGTCCG TGTTCATCGGCGGGT TERM 152 168179 - 168220 + g 89 -18.7 -3.13522 | gap 1, opp_overlap 168179 168189, overlap 168178 TACGTTGCCGATAAC CGG-CCCGAAACGGCGGCGC AAC GCGCCGCTGTTGGGGGTCCG TGTTCATCGGCGGGT TERM 153 168209 - 168189 - G 81 -13.9 -3.54638 | opp_overlap 168179 168178, overlap 168179 ATAACCGGCCCGAAA CGGCGGCGC AAC GCGCCGCTG TTGGGGGTCCGTGTT Rmet_6340 168795 - 168235 - | hypothetical protein Rmet_6341 169486 - 169202 - | addiction module toxin, RelE/StbE Rmet_6342 169761 - 169483 - | hypothetical protein Rmet_6343 170000 - 170365 + | resolvase-like protein Rmet_6344 170850 - 170362 - | putative transcriptional regulator MerR Rmet_6345 170868 - 171218 + | putative mercuric transport protein Rmet_6346 171439 - 171212 - | hypothetical protein SEQUENCE gi|94308945|ref|NC_007973.1| Ralstonia metallidurans CH34 chromosome 1, complete sequence (length 3928089) TERM 1 1658 - 1633 - g 74 -11.1 -3.65522 | gap 1, overlap 1647 CATGTATTCCAAGAA GCGGCC-CGCCA ATA TCGCGCGGCCGC GCCAGATCGCGATGT dnaA 104 - 1843 + | chromosomal replication initiation protein TERM 2 1889 - 1848 - f 88 -18.8 -2.88579 | gap 2 TCAAGGGCTGACACA CGTGCAGGTTGCGTGCGCCG AATG CGGCGC-CGCAGCCTGC-CG AAAGCGGCTCATCGA Rmet_0002 2220 - 3335 + | DNA polymerase III subunit beta TERM 3 3419 - 3378 - f 75 -13.7 -2.88758 | gap 1, opp_overlap 3378 3380 ACAATCGGGCACACA CCGCAGCAGGGGCCGGATCG AAC CGATCCG-CCCCTTTTGCCG TTTTTAAGTAACCCG TERM 4 3378 - 3419 + F 100 -15.9 -4.65895 | gap 1, opp_overlap 3378, overlap 3380 ACAATCGGGCACACA CCGCAGCAGGGGCCGGATCG AAC CGATCCG-CCCCTTTTGCCG TTTTTAAGTAACCCG TERM 5 3380 - 3417 + F 83 -17.1 -2.63208 | gap 1, opp_overlap 3378, overlap 3378 AATCGGGCACACACC GCAGCAGGGGCCGGATCG AAC CGATCCG-CCCCTTTTGC CGTTTTTAAGTAACC TERM 6 3788 - 3766 - g 77 -12.7 -3.30124 | gap 1 CTCGATCGTCGACAA CGGCC-GCGG CATT CCGCCGGCCG TGAAGTTCGACGACA TERM 7 5611 - 5637 + G 73 -14.4 -2.87931 | opp_overlap 5599 5597 GCACCGCCTGATGAT CGCGCGTCGCCA TCA TGGCAACGTGCG TCTGTCACACGTGGA gyrB 3521 - 6046 + | DNA gyrase subunit B TERM 8 6112 - 6141 + F 70 -12.3 -2.88249 | opp_overlap 6113 6120, overlap 6120 TTGTGACGCAGTAAA TGAAAAAACCGCC TTCG GGCGGTTTTTTTG TATGTAGGAAATCTG TERM 9 6133 - 6120 - f 100 -9.5 -5.40004 | opp_overlap 6112 6120, overlap 6113 CAGTAAATGAAAAAA CCGCC TTCG GGCGG TTTTTTTGTATGTAG TERM 10 6120 - 6133 + F 100 -9.5 -5.76633 | opp_overlap 6120 6113, overlap 6112 CAGTAAATGAAAAAA CCGCC TTCG GGCGG TTTTTTTGTATGTAG TERM 11 7216 - 7229 + G 79 -3.8 -4.87626 | opp_overlap 7208, overlap 7213 CAGTGAATCCGCGAG CGGA CGTGGC TCCG TTTTTGGTGTTCAAG Rmet_0004 6990 - 8099 + | hypothetical protein TERM 12 8357 - 8317 - T 88 -13.3 -3.68619 | opp_overlap 8330, overlap 8318 GCGAAGCCATGCAAA CCTGAAGCGGAAATGACGC CGA GCGCCATTTCCGCACCAAC ATCCCCCCCTCAAGC TERM 13 8356 - 8318 - T 84 -16.8 -2.8085 | opp_overlap 8330, overlap 8317 CGAAGCCATGCAAAC CTGAAGCGGAAATGACGC CGA GCGCCATTTCCGCACCAA CATCCCCCCCTCAAG Rmet_0005 10121 - 8367 - | twin-arginine translocation pathway signal TERM 14 9061 - 9087 + g 78 -15.8 -2.71364 | GTGGAGTTGAGGTAT GGCTCGCGCTGG TAT CCGGTGCGGGCC TGGTTGGAGCCGTCG Rmet_0006 11189 - 10260 - | hypothetical protein Rmet_0007 12113 - 11295 - | AraC family transcriptional regulator Rmet_0008 13038 - 12151 - | binding-protein-dependent transport systems inner membrane component TERM 15 12303 - 12290 - G 70 -8.1 -3.9941 | CCGCGCACAAGGAAA GTGGG CACG CCCAC GCTGACCGTGTACTG TERM 16 12954 - 12938 - G 72 -6.5 -4.20712 | overlap 12931 12930 12939 CAGAACACGGCAAAA GTCGCCA ACG TGGCGAA CACCGCTACCCACGC Rmet_0009 13972 - 13040 - | binding-protein-dependent transport systems inner membrane component TERM 17 13178 - 13166 - G 73 -9.1 -3.9122 | opp_overlap 13176 TATGCCTGTAAAGAA GGCCA GGC TGGCC AGCACCTGGGTCGTA TERM 18 13349 - 13375 + g 72 -13 -3.05384 | opp_overlap 13315 13328 GCCGTCCATGGCAGC GGCATCGTGCAG ATC CTGCGGGATGCC TTGCATCCCGGCCAG Rmet_0010 15006 - 13969 - | ABC transporter-related protein Rmet_0011 16420 - 15026 - | twin-arginine translocation pathway signal Rmet_0012 17277 - 16618 - | isoprenylcysteine carboxyl methyltransferase TERM 19 17244 - 17258 + g 82 -6.4 -4.62069 | overlap 17240 CGAGGGCGCCCGCGA TGGTGA TGA TCGCCA TTTTTGGAGTGGGAC Rmet_0013 17396 - 17752 + | hypothetical protein Rmet_0014 17884 - 18834 + | hypothetical protein Rmet_0015 18848 - 19531 + | DEAD/DEAH box helicase-like protein Rmet_0016 19721 - 20161 + | signal-transduction protein Rmet_0017 20369 - 21955 + | EmrB/QacA family drug resistance transporter TERM 20 22210 - 22179 - g 71 -7.8 -4.08216 | gap 1, opp_overlap 22202, overlap 22180 TCACGCCGCCGAAAA GGCCGTGCCGGCGGC CGC GCAGCCGGCG-GGCA ATTGCCCGGCGTCGT Rmet_0018 22066 - 22692 + | glutathione peroxidase Rmet_0019 22853 - 23626 + | beta-lactamase-like protein Rmet_0020 23692 - 24558 + | fumarylacetoacetate (FAA) hydrolase Rmet_0021 24791 - 26068 + | peptidase M20D, amidohydrolase TERM 21 26121 - 26096 - T 77 -11.9 -3.66018 | gap 1 GGACTATTTGAAGAA GGCA-CTCGGCG GCA CGCCGAACTGCC GGCGGAACATCGTCG Rmet_0022 26902 - 26084 - | AraC family transcriptional regulator TERM 22 26975 - 27005 + H 76 -9.5 -4.08216 | overlap 26976 TAGCATCGTCACACT TCCCGGCCGCGCG CTGTT CGGGCGCCCGGGC TTTTGCCAAGCATGA TERM 23 26976 - 27004 + H 72 -13 -3.04715 | overlap 26975 AGCATCGTCACACTT CCCGGCCGCGCG CTGTT CGGGCGCCCGGG CTTTTGCCAAGCATG Rmet_0023 27028 - 28257 + | major facilitator transporter Rmet_0024 29636 - 28320 - | glutamate carboxypeptidase Rmet_0025 29809 - 30120 + | hypothetical protein Rmet_0026 30161 - 31252 + | hypothetical protein TERM 24 31329 - 31354 + T 76 -8.9 -4.05033 | gap 1, opp_overlap 31329 31326 TAGGGCAGCCAATGA CGGCCGGCCGCG TGT CGCGAC-GGCTG TTTCTATCGGGTCCA Rmet_0027 32078 - 31311 - | two component transcriptional regulator TERM 25 33060 - 33037 - g 100 -15.4 -5.44119 | opp_overlap 33041 GCCATCGCAAAAAAA GAAAGGCACC CGAA GGTGCCTTTC TGCCAACTGATCAAA TERM 26 33041 - 33056 + G 75 -10.4 -3.87075 | opp_overlap 33037 TCGCAAAAAAAGAAA GGCACC CGAA GGTGCC TTTCTGCCAACTGAT Rmet_0028 32264 - 33070 + | two component transcriptional regulator Rmet_0029 33877 - 33083 - | porin Rmet_0030 33977 - 34276 + | transposase IS3/IS911 Rmet_0031 34273 - 35166 + | integrase catalytic subunit Rmet_0032 35498 - 35163 - | porin TERM 27 35226 - 35259 + g 72 -8.2 -4.19238 | overlap 35219 35250 35251 GAAGATCTGGCCCGA CGAGCT-CATCGTGCC GTTG GGCACGTTGAAGC-CG TTTTCCAGTTGGAAG TERM 28 35824 - 35794 - R 84 -16.9 -2.79133 | overlap 35816 GAAGTGCGGAGGACA GCGCAGCGGTCGT GAAAT ACGACTGCTGCGC TGCAATAACCTAATC Rmet_0033 36173 - 35919 - | cell division topological specificity factor MinE TERM 29 35945 - 35961 + g 73 -12.3 -3.41051 | GAATTTCTATCTTGA CCTCGAG AAC CTCGAGG TTGTCCTGACGCTCC Rmet_0034 37001 - 36189 - | septum site-determining protein MinD Rmet_0035 37898 - 37050 - | septum formation inhibitor TERM 30 38017 - 37959 - H 84 -10.1 -4.20918 | gap 2 GGGAACTGTAACAAA TGTCGGACGGCCGGC-CCCAGGTGG-CCG ATG CGGACCACGGGCGCGCCAGCCGCACGTCA AAAAGTGGTGATGGC Rmet_0036 37986 - 39068 + | Mg2+ transporter protein, CorA-like protein Rmet_0037 39551 - 39303 - | hypothetical protein Rmet_0038 39542 - 41374 + | potassium-transporting ATPase subunit A Rmet_0039 41393 - 43624 + | potassium-translocating P-type ATPase, B subunit Rmet_0040 43646 - 44257 + | potassium-transporting ATPase, C subunit Rmet_0041 44406 - 47309 + | osmosensitive K+ channel signal transduction histidine kinase TERM 31 47615 - 47588 - g 74 -13.4 -3.25192 | gap 1, overlap 47586 GCGAAGCCGACAAGA TCG-CCGCGCTCG ATG CGGGCGCGGACGA CTACCTGACCAAGCC Rmet_0042 47311 - 48006 + | two component transcriptional regulator Rmet_0043 48145 - 48855 + | Sel1 TERM 32 51087 - 51112 + G 71 -13.3 -3.02511 | overlap 51072 GCGCGCGACGTGGCG TGGCGGCTGGT ATTC ATCGGCCGCCA TATTGAACGGCTCGG Rmet_0044 48933 - 51581 + | hypothetical protein Rmet_0045 51578 - 52480 + | transglutaminase-like protein TERM 33 52501 - 52527 + T 71 -9.3 -3.73068 | opp_overlap 52502, overlap 52502 GCCAGGCGCAAAAAA ACCGGCCACGC TTGAT GCATGGCCGGC TTCTTCACTTCCGGA TERM 34 52526 - 52502 - T 100 -15 -5.42259 | opp_overlap 52501 52502 CCAGGCGCAAAAAAA CCGGCCACGC TTGAT GCATGGCCGG CTTCTTCACTTCCGG gatB 54006 - 52552 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Rmet_0047 55156 - 54086 - | dienelactone hydrolase TERM 35 54734 - 54775 + g 81 -14.3 -3.53012 | GTAGCGGCTCTGCAG CGCGCCGGCCGGATCGATG ACTT CCTCGATCGTGCCCGCGCG TTTCGCGGCCACGCG TERM 36 55043 - 55020 - G 75 -13.8 -2.94218 | ACTGCCGATGACACA GCAGGCTGCG CGGG CGCGGCCTGC AGGAGCGCCATGCCG Rmet_0048 55663 - 55190 - | putative lipoprotein gatA 57170 - 55671 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 37 56965 - 57013 + g 70 -14.4 -2.53263 | gap 1 CCGGTCAGCGGCGTG GCCTGGCCCTGGGC-GCGGCGCT CGTC GGCGGCGCGGGCCTGGGCCAGGG TCAGTTCGGGGTCGA TERM 38 57068 - 57039 - G 73 -12.1 -3.35813 | GTCGACGGCAACGAA CGCATTGAGGGCG CGGC CGGCCTCGATGCG GGCCAGGTACTCGCG gatC 57521 - 57222 - | aspartyl/glutamyl-tRNA amidotransferase subunit C Rmet_0051 58487 - 59530 + | rod shape-determining protein MreB TERM 39 60234 - 60215 - g 70 -11.4 -3.35679 | GTTGCTGACCGACAA GGACCAGG CGAT CCCGGTCC AGGTGGTGCGCAACG TERM 40 60569 - 60545 - g 70 -11.3 -3.30243 | overlap 60546 AGCCACGTCGCAGAA GGCCGAGCGCG GCT CGCGGTCGGCG GCGGCACGCGCTGGC TERM 41 60568 - 60546 - g 74 -14.8 -2.57931 | overlap 60545 GCCACGTCGCAGAAG GCCGAGCGCG GCT CGCGGTCGGC GGCGGCACGCGCTGG Rmet_0052 59673 - 60683 + | rod shape-determining protein MreC Rmet_0053 60680 - 61192 + | rod shape-determining protein MreD Rmet_0054 61236 - 63617 + | peptidoglycan glycosyltransferase Rmet_0055 63631 - 64773 + | rod shape-determining protein RodA TERM 42 64853 - 64870 + G 76 -5.5 -4.58395 | GACGTTGCCGCTTAC CTGCAGA GCCA TCCGCAG TTTTTCGAAGATCAC Rmet_0056 64826 - 65497 + | hypothetical protein xerC 65517 - 66626 + | site-specific tyrosine recombinase XerC Rmet_0058 67516 - 66623 - | DNA-binding transcriptional activator GcvA Rmet_0059 67773 - 68141 + | hypothetical protein TERM 43 68261 - 68227 - g 95 -14.8 -3.97042 | opp_overlap 68229, overlap 68228 GCATGACGAAGCAAA TCGGGCCGGCCCGCGC TCT GCGTAGGCCGGCCCTT TTCGTTACACTCCTG TERM 44 68260 - 68228 - g 89 -18.3 -2.97743 | opp_overlap 68229, overlap 68227 CATGACGAAGCAAAT CGGGCCGGCCCGCGC TCT GCGTAGGCCGGCCCT TTTCGTTACACTCCT TERM 45 68229 - 68259 + G 100 -21.8 -4.42238 | opp_overlap 68228 68227 ATGACGAAGCAAATC GGGCCGGCCCGCGC TCT GCGTAGGCCGGCCC TTTTCGTTACACTCC lipB 68214 - 69008 + | lipoyltransferase TERM 46 69734 - 69701 - g 71 -9.4 -3.79473 | opp_overlap 69724, overlap 69693 69721 ACCACAACATGGAAA CCGTGCCGCGCCTG TACAAG CAGGCCCGCCCCGG CGCTGATTACGCGCA Rmet_0061 69085 - 70077 + | lipoyl synthase TERM 47 70109 - 70129 + F 100 -15.4 -5.75945 | opp_overlap 70109 TGCGCGTCACGAAAA GCGGCCGG ATTTC CCGGCCGC TTTTTTTTGGCCCGT TERM 48 70129 - 70109 - f 100 -16.1 -4.25104 | opp_overlap 70109 TGCGCGTCACGAAAA GCGGCCGGA TTT CCCGGCCGC TTTTTTTTGGCCCGT TERM 49 70178 - 70196 + F 74 -7.4 -4.32048 | AGCAGCCTTTCCATT GAGGTGGT GCA AGCACCTC TTTTGCATCTTCTTG TERM 50 71022 - 71040 + G 85 -7.3 -4.63218 | CGCCGTCGTTGTTCG CGCCCGG CGATA CCGTGCG TTTTGTTGCCGAGGA Rmet_0062 70418 - 71068 + | hypothetical protein Rmet_0063 71065 - 72084 + | allophanate hydrolase subunit 2 Rmet_0064 72161 - 72901 + | hypothetical protein Rmet_0065 72969 - 73703 + | hypothetical protein TERM 51 73982 - 73961 - g 74 -12.9 -3.19602 | overlap 73959 CCTGCCAGAGGAAGA GCGTCGCGC CAGC GCGCGTCGC CTGGGCAACAAGCTG Rmet_0066 73707 - 74657 + | hypothetical protein Rmet_0067 74671 - 75339 + | pyrrolidone-carboxylate peptidase Rmet_0068 76673 - 75351 - | VanZ like protein Rmet_0069 77372 - 76725 - | putative lipoprotein TERM 52 76871 - 76900 + g 81 -7.7 -4.54047 | overlap 76866 CACCCTGGCCGTCCG CGCTTGGCGCCGG CTGT TCGGCGACGAACG TTTTCTGTCCGATCA TERM 53 77001 - 76982 - G 71 -7.8 -4.13767 | TCGGGGAGTCGAAAA CCTGTTCG AAGG CGAGCAGG TCGACCTTGAGCGCC Rmet_0070 78358 - 77417 - | hypothetical protein Rmet_0071 79197 - 78358 - | ABC transporter-related protein Rmet_0072 80324 - 79194 - | hypothetical protein Rmet_0073 80485 - 81342 + | biotin--protein ligase Rmet_0074 81339 - 82172 + | pantothenate kinase Rmet_0075 82215 - 83009 + | sporulation related Rmet_0076 83624 - 83133 - | bifunctional ADP-heptose synthase TERM 54 83645 - 83664 + r 88 -13.6 -3.62096 | opp_overlap 83645 GTGGAGAAAGAAAAA CCCCATCG TATC CGATGGGG TTTGGCATGCTCAGG TERM 55 83664 - 83645 - R 100 -13.6 -5.38054 | opp_overlap 83645 GTGGAGAAAGAAAAA CCCCATCG TATC CGATGGGG TTTGGCATGCTCAGG Rmet_0077 84562 - 83702 - | hypothetical protein TERM 56 84703 - 84686 - R 76 -6.9 -4.56597 | opp_overlap 84686 84697 84699 TTGTTGTCGCAAAAA GTGGCGC TATT GCGACAC TTCTGTCACTTCTTT TERM 57 84697 - 84712 + r 70 -3.2 -4.61482 | opp_overlap 84686, overlap 84686 84699 AAAAGTGGCGCTATT GCGACA CTTC TGTCAC TTCTTTTTTGGCCGG Rmet_0078 85948 - 84692 - | patatin Rmet_0079 86844 - 85945 - | hypothetical protein Rmet_0080 87726 - 86899 - | enoyl-CoA hydratase TERM 58 87854 - 87831 - R 89 -16.8 -3.17194 | opp_overlap 87831 ACGCGTCGAATGCAA TTCCCCGACC GGCT GGTCGGGGAA TTATAGGCCCAGGAA TERM 59 87831 - 87854 + r 93 -16.8 -3.28712 | opp_overlap 87831 ACGCGTCGAATGCAA TTCCCCGACC GGCT GGTCGGGGAA TTATAGGCCCAGGAA Rmet_0081 89148 - 88108 - | fumarylacetoacetate (FAA) hydrolase TERM 60 88483 - 88513 + g 83 -14.7 -3.25823 | gap 1, opp_overlap 88501 GAGTTCGTCCGGCGT GACCGCCACCGGCG AAAA CGCC-GTGGCGGGC TTGCTCTGGAAGAAG Rmet_0082 89192 - 90049 + | IclR family transcriptional regulator Rmet_0083 90102 - 91106 + | putative prolin-rich signal peptide protein TERM 61 91322 - 91345 + G 71 -10.2 -3.57144 | opp_overlap 91309, overlap 91323 CACCGCGCGGCACCT TGCCGCACGC TATC GCGTGCTGCG TTTCGACATGCGGGG Rmet_0084 91161 - 92009 + | 3-oxoadipate enol-lactonase Rmet_0085 92245 - 92502 + | hypothetical protein TERM 62 92572 - 92589 + T 81 -14.1 -3.40191 | opp_overlap 92572 GCCTCCAAAAACAAA CGCCCGC TTTT GCGGGCG TTGCTGTCTTCTCAG TERM 63 92589 - 92572 - T 100 -14.1 -4.85782 | opp_overlap 92572 GCCTCCAAAAACAAA CGCCCGC TTTT GCGGGCG TTGCTGTCTTCTCAG Rmet_0086 93013 - 92621 - | rhodanese-like protein TERM 64 92797 - 92827 + g 100 -8.9 -5.0133 | gap 1, overlap 92797 92798 TGCGGCAGATCAGCA C-GACCGGGCGGGC CGAG GCTTGCCCGGCCAG TTTTTTCACCGCCTG TERM 65 93093 - 93074 - H 72 -11.4 -3.28712 | gap 1, overlap 93075 GCCGGTTGCTGACAA CTGGCCCGG CAC CCGGGCC-G ACACCGGGCCCGACA Rmet_0087 93237 - 94304 + | methionine synthase (B12-dependent) TERM 66 95618 - 95583 - g 74 -2.4 -4.72497 | gap 1, overlap 95584 95585 TATCGAGGAAGAAAA GCGC-CTGGTGGCCG AGGCCGG CGGCGACGTGCGCGC GCGCGGCAAGATCGT Rmet_0088 94333 - 97080 + | methionine synthase (B12-dependent) TERM 67 97095 - 97140 + F 95 -19.1 -3.38046 | opp_overlap 97102, overlap 97102 GAAGCTGTAACCAGG TGCAAGAGCCGGGATACCGCG CGCG CGTGGCATCCCGGCTTTTTCA TATTTGGCGTCAGCC TERM 68 97102 - 97133 + F 100 -18 -4.93696 | opp_overlap 97102, overlap 97095 TAACCAGGTGCAAGA GCCGGGATACCGCG CGCG CGTGGCATCCCGGC TTTTTCATATTTGGC TERM 69 97133 - 97102 - f 89 -18 -3.05268 | opp_overlap 97102 97095 TAACCAGGTGCAAGA GCCGGGATACCGCG CGCG CGTGGCATCCCGGC TTTTTCATATTTGGC Rmet_0089 97386 - 97724 + | cell wall surface anchor family protein TERM 70 97797 - 97821 + F 83 -17.2 -2.64155 | opp_overlap 97794 97793, overlap 97794 97800 ACCTCGACAAACCGG CAACGGGCGC CTTGT GCGCCCGTTG TGCATTTCCGACAGC TERM 71 97800 - 97818 + F 79 -13.1 -3.47349 | opp_overlap 97794 97793, overlap 97797 97794 TCGACAAACCGGCAA CGGGCGC CTTGT GCGCCCG TTGTGCATTTCCGAC TERM 72 97954 - 97920 - f 100 -7.8 -5.1925 | gap 1, opp_overlap 97922, overlap 97922 CTACAATGCAAAAAA GCCGGCCCGG-TCCA TCCATC CGAAGCCGGGCCGTC CTTCACCGTGGAGAC Rmet_0090 97974 - 98606 + | two component LuxR family transcriptional regulator Rmet_0091 98767 - 99174 + | response regulator receiver domain-containing protein Rmet_0092 100625 - 99240 - | histidine kinase TERM 73 99858 - 99873 + g 75 -6.8 -4.43681 | gap 1, overlap 99859 TTCGTCGTGCAGCTC G-CGCGC CAG GCGCGTC TTTTCGTCTTCGGTC TERM 74 99859 - 99871 + g 75 -10.5 -3.81853 | overlap 99858 TCGTCGTGCAGCTCG CGCGC CAG GCGCG TCTTTTCGTCTTCGG TERM 75 99926 - 99961 + g 73 -9.7 -3.9344 | gap 2 GGGCGGACAGCTGGC GCGTGCGGGCGCGCACC TTGC GGT-CGAG-CCGCGCGC TTTCCTCTTCCAGTT Rmet_0093 100777 - 101070 + | hypothetical protein Rmet_0094 101101 - 101535 + | protein of unknown function DUF883, ElaB TERM 76 101701 - 101726 + T 80 -10.3 -4.10161 | opp_overlap 101693 AAACGAAGCCGGAAG GCGCGCGGCGG GCTG CTGCCTTGCGC TTTTCCGCAGTAATC TERM 77 101773 - 101802 + T 100 -12.7 -4.8048 | overlap 101774 AATCCCTGGTCCGGG TCGCCCGGTCGCC CTGT GGCAGCCGGGCGC TTTTTCGTGTGCGAC TERM 78 101774 - 101801 + T 93 -16.2 -3.47806 | overlap 101773 ATCCCTGGTCCGGGT CGCCCGGTCGCC CTGT GGCAGCCGGGCG CTTTTTCGTGTGCGA Rmet_0095 102267 - 101947 - | hypothetical protein TERM 79 103737 - 103758 + G 74 -10.1 -3.76482 | gap 1, overlap 103747 GCCCGCGCACTTCAC GCGCGGCCGC GAC GCGG-TGCGC TTCTTCCTGCTGTCG argS 102445 - 104253 + | arginyl-tRNA synthetase Rmet_0097 104393 - 105133 + | sporulation related Rmet_0098 105279 - 105917 + | DSBA oxidoreductase TERM 80 105934 - 105975 + F 100 -18.7 -4.16943 | overlap 105939 CGCCGCGATCTGACC GACGACGGCCCGGCGTACC GTGT GGTGCGCCGGGCCGTTCTG TTTTGGAATCTCCGA TERM 81 105939 - 105970 + F 100 -25.2 -3.96506 | overlap 105934 CGATCTGACCGACGA CGGCCCGGCGTACC GTGT GGTGCGCCGGGCCG TTCTGTTTTGGAATC TERM 82 106677 - 106654 - g 71 -4.5 -4.56597 | gap 1 GTGTTTGCGCAAAAA GCGGTGCGGC GAATT GCCGCAG-GC AGCCGCTTCGCGGTG Rmet_0099 106009 - 106806 + | short chain dehydrogenase TERM 83 107077 - 107060 - g 81 -9.1 -4.30809 | overlap 107050 107061 CAATATCGATGAAAA CCGACGG GAGA CCGTCGA CGAAATCCGCACCTT Rmet_0100 106806 - 107648 + | hypothetical protein Rmet_0101 108728 - 107649 - | beta-lactamase-like protein Rmet_0102 108861 - 109295 + | MerR family transcriptional regulator Rmet_0103 109418 - 110599 + | isovaleryl-CoA dehydrogenase TERM 84 110678 - 110620 - f 79 -9 -4.1899 | gap 3, opp_overlap 110631 CCAGTCGACTGAAAA GTGCTCTAT-GAGGCGTTCGGTGCC-GCC ATTG GGCCGGCACCGAACGCCTTTACA-ATCTC AACATCGCCGCCTGC TERM 85 110631 - 110667 + F 100 -24.6 -3.63627 | gap 1, opp_overlap 110620 AAAAGTGCTCTATGA GGCGTTCGGTGCC-GCC ATTG GGCCGGCACCGAACGCC TTTACAATCTCAACA TERM 86 112445 - 112427 - g 75 -9.5 -3.99324 | TGGCAGCACCACAAA GACCGGC TCCTG GCCGGCC ATGTCCATGACTTTT aceK 110726 - 112549 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein Rmet_0105 112546 - 113217 + | carbonic anhydrase Rmet_0106 113259 - 114443 + | acetyl-CoA acetyltransferase Rmet_0107 114493 - 115173 + | short chain dehydrogenase TERM 87 115795 - 115785 - g 72 -6.8 -4.25104 | GCGTCTGGAGGAAAA GCTG GGC CAGC ACTCTTCCGACACCG Rmet_0108 115189 - 116319 + | acyl-CoA dehydrogenase-like protein Rmet_0109 116409 - 117068 + | DSBA oxidoreductase TERM 88 117645 - 117606 - g 73 -14.3 -2.80816 | gap 1, opp_overlap 117604 117602 CGGTGATCGAGGACA GTCCCACCGGC-GCCACG GCGGG CGTGGCTGCCGGCATGAC GGTGTTTGGCTACGC Rmet_0110 117065 - 117748 + | HAD family hydrolase TERM 89 117781 - 117756 - g 77 -11.7 -3.75024 | TCGGATGACGAACAA GGGTCGGGCCG GCAC CGGCCCGGCAC CGTGCCCCTGCGGCA TERM 90 118072 - 118091 + G 75 -4.3 -4.67608 | gap 1 GGGGGCCGCGCGCAC CGGCTGCA TGAGC TG-AGCCG TTTTGTATTCGAGTC Rmet_0111 117745 - 118170 + | hypothetical protein TERM 91 118496 - 118526 + G 74 -5.2 -4.4648 | opp_overlap 118468, overlap 118475 GACGTGCGCGCTTTG CCGCGCAGACCG CCGAATT CGTGCGGCGCGG TTTTGTGGTGGCACT Rmet_0112 118231 - 119160 + | putative signal peptide protein Rmet_0113 119221 - 120009 + | enoyl-CoA hydratase Rmet_0114 120229 - 121695 + | adenosylmethionine--8-amino-7-oxononanoate transaminase Rmet_0115 121685 - 122905 + | 8-amino-7-oxononanoate synthase Rmet_0116 122902 - 123666 + | dethiobiotin synthase TERM 92 124523 - 124569 + G 84 -16.7 -2.89564 | gap 2 CCGTTCGAGTTTGTC CGCACGATCGCG-GTGGCG-CGT ATC ACGATGCCGCGCGCGATGGTGCG TCTGTCCGCTGGCCG Rmet_0117 123707 - 124744 + | biotin synthase TERM 93 125172 - 125222 + G 70 -11.1 -3.33815 | overlap 125177 CATCCGGCTCGATGA CGCCGGCATGGCGGCCCAGATG-GC CGA GTACGTCACGGCCGCCGTGCTG-CG TTACTTCCGCCGGCT Rmet_0118 124894 - 125835 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_0119 125870 - 126367 + | YbaK/prolyl-tRNA synthetase associated region Rmet_0120 126364 - 126618 + | hypothetical protein Rmet_0121 126615 - 127544 + | beta-lactamase-like protein Rmet_0122 127547 - 128098 + | GCN5-related N-acetyltransferase TERM 94 128112 - 128141 + T 93 -16.4 -3.58343 | AGCCGTCGTTATGCG CGCCCCTCCCCC GTGAGA GGGAGAGGGGCG TTTCCAGATCGTCAG Rmet_0123 130312 - 128153 - | TonB-dependent receptor TERM 95 130303 - 130321 + g 75 -3 -4.72729 | GAATACGGGTGTTGT TCGAGAAC ATG GCTCGCGA TTTTCGTTTTCGTTC Rmet_0124 130825 - 130427 - | hypothetical protein Rmet_0125 131990 - 130815 - | cobalamin synthesis CobW-like protein TERM 96 132052 - 132034 - R 86 -12.4 -3.9712 | opp_overlap 132032 132030 132029 CGACTGTAGCAGAAA GCCTGCCC CGG GGACAGGC GGTCATTCTGAAATC TERM 97 132154 - 132133 - R 100 -18.7 -5.45802 | opp_overlap 132130 132129 TCCGGAAAAGAAAAA GCGGCCCGG ATCA CCGGGCCGC CGAGTTTTCCGCCTC Rmet_0126 132872 - 132183 - | TraR/DksA family transcriptional regulator Rmet_0127 134282 - 133191 - | cobalamin synthesis protein, P47K Rmet_0128 134842 - 134333 - | ferric uptake regulator family protein TERM 98 135237 - 135279 + G 85 -7.6 -4.70879 | opp_overlap 135235 135236, overlap 135238 135241 AGGCCTACAGCAAGC GCGAGATGGCGCGGGACC AGGTGGA GGTCATGCGCCAGCTTGG TTTTTCCCGTTTCGC TERM 99 135238 - 135278 + G 70 -11.1 -3.41804 | opp_overlap 135235 135236, overlap 135237 135241 GGCCTACAGCAAGCG CGAGATGGCGCGGGACC AGGTGGA GGTCATGCGCCAGCTTG GTTTTTCCCGTTTCG TERM 100 135241 - 135275 + G 73 -9.2 -3.82528 | opp_overlap 135235 135236, overlap 135238 135237 CTACAGCAAGCGCGA GATGGCGCGGGACC AGGTGGA GGTCATGCGCCAGC TTGGTTTTTCCCGTT Rmet_0129 134975 - 135874 + | alpha/beta hydrolase fold TERM 101 136151 - 136180 + G 78 -7.7 -4.36914 | TTGCATTGAAATTCG CGGCCGTGCTGGC TGTT GCTGGCGTGGGCG TTTTCTCGGGAGCAC Rmet_0130 136126 - 137112 + | hypothetical protein TERM 102 137140 - 137160 + F 100 -18.3 -5.56673 | opp_overlap 137140 GCTCCGTGCCGCAAA GGCCACGCG TAT CGCGTGGCC TTTTTTATTGTCCGT TERM 103 137160 - 137140 - f 100 -18.3 -3.53012 | opp_overlap 137140 GCTCCGTGCCGCAAA GGCCACGCG TAT CGCGTGGCC TTTTTTATTGTCCGT Rmet_0131 137308 - 137844 + | ATP-dependent protease peptidase subunit hslU 137875 - 139194 + | ATP-dependent protease ATP-binding subunit TERM 104 139237 - 139220 - T 100 -12.7 -4.55128 | opp_overlap 139215 139220 139223, overlap 139215 AGTCTGAAAGTAAAA GAGCCGG GTGA CCGGCTC TTTTCGTTTGGGGTG TERM 105 139220 - 139237 + T 100 -12.7 -4.55798 | opp_overlap 139220 139215, overlap 139215 139223 AGTCTGAAAGTAAAA GAGCCGG GTGA CCGGCTC TTTTCGTTTGGGGTG Rmet_0133 139799 - 139272 - | nuclear export factor GLE1 Rmet_0134 139939 - 140412 + | hypothetical protein Rmet_0135 141017 - 140454 - | response regulator receiver domain-containing protein TERM 106 141012 - 140987 - G 100 -10.5 -5.00616 | GGGTGCCGGAAAAAA CTTCGTCGTCA TCGA TGACGAGGAAG GGCATGGCGTCGTTG Rmet_0136 142426 - 141047 - | periplasmic sensor signal transduction histidine kinase Rmet_0137 142608 - 143096 + | hypothetical protein Rmet_0138 144117 - 143182 - | LysR family transcriptional regulator TERM 107 143994 - 143977 - G 72 -12.7 -3.14931 | opp_overlap 143987 GGGATCGTCGAGCAA CTGGCGC AGCC GCGCCAG CGAGTGGCTCACGGC Rmet_0139 144480 - 144172 - | hypothetical protein Rmet_0140 144495 - 145529 + | acetylglutamate kinase Rmet_0141 145594 - 146598 + | pyrimidine 5-nucleotidase slmA 146595 - 147245 + | nucleoid occlusion protein TERM 108 147440 - 147480 + F 95 -2 -5.64274 | gap 3 GGGACACCGCGAACG CCCGACTTGGC--TGCG AAGCATCACA CGCACTGCCA-GTCGGG TTTTTTTATGCCTGC metX 147516 - 148688 + | homoserine O-acetyltransferase TERM 109 149030 - 148990 - g 70 -10.9 -3.38768 | opp_overlap 148983 GCAGACCATCCACAA CACGGCCCAGGTGCTGCGC GAC ACCCTGCGCGTGGGCCGCG AGTGCATCGTCTCGT Rmet_0144 148685 - 149296 + | methionine biosynthesis MetW Rmet_0145 149389 - 150207 + | hypothetical protein TERM 110 150213 - 150256 + T 74 -12.5 -3.15544 | gap 3, opp_overlap 150212 150208 CAAGGAATAAGTTAC GC-CGGGCGC-GGCACC-GCAG GTT CTGCCGGTTCCCGCGCCTGCGC TTCGTAGCGGTGGAC ampG 151489 - 150209 - | muropeptide transporter Rmet_0147 151708 - 152562 + | peptidase M48, Ste24p TERM 111 152586 - 152616 + T 89 -12.7 -4.07568 | opp_overlap 152592, overlap 152592 GCCCGGACGGGCGAA AAAAAACCGGCTC AGATC GAGCCGGTTTTTC TTTTGAAGCGGGCGA TERM 112 152592 - 152610 + T 100 -11.7 -5.45802 | opp_overlap 152592, overlap 152586 ACGGGCGAAAAAAAA CCGGCTC AGATC GAGCCGG TTTTTCTTTTGAAGC TERM 113 152610 - 152592 - T 100 -12.4 -5.75945 | opp_overlap 152592 152586 ACGGGCGAAAAAAAA CCGGCTCA GAT CGAGCCGG TTTTTCTTTTGAAGC Rmet_0148 153643 - 152636 - | N-acetyl-gamma-glutamyl-phosphate reductase Rmet_0149 154585 - 153809 - | exodeoxyribonuclease III (xth) TERM 114 154063 - 154082 + g 72 -2.8 -4.66833 | CGATCCAGGCGCGCT CTTCGG GCAGGAAA CCGGAG TTTTTCAGGTTGCCC TERM 115 154366 - 154393 + g 93 -6.2 -5.252 | GCTCCGGCTTGTGGC GGGTATAGAGGC CCAC GCCGCTGTAGCC TTTTTTCTCGGCATA pyrE 154616 - 155293 + | orotate phosphoribosyltransferase TERM 116 155322 - 155301 - f 74 -11.5 -3.44146 | opp_overlap 155303, overlap 155303 GCGTCTGACAACGAA CACGGCCCC GGAT GGGGCCGTT TCTTTTTGGGAGCAT TERM 117 155303 - 155320 + F 100 -14.1 -4.85782 | opp_overlap 155301 155303 GTCTGACAACGAACA CGGCCCC GGAT GGGGCCG TTTCTTTTTGGGAGC TERM 118 155320 - 155303 - f 81 -14.1 -3.29325 | opp_overlap 155303, overlap 155301 GTCTGACAACGAACA CGGCCCC GGAT GGGGCCG TTTCTTTTTGGGAGC Rmet_0151 155341 - 156669 + | patatin Rmet_0152 157503 - 156694 - | polyphosphate:AMP phosphotransferase TERM 119 157519 - 157537 + r 87 -17.4 -2.98942 | opp_overlap 157519 TGGTGCTCCCGAAGA CGGGGCCG GGC CGGCCCCG TGTGTCTGCGAGCCT TERM 120 157537 - 157519 - R 87 -17.4 -3.01712 | opp_overlap 157519 TGGTGCTCCCGAAGA CGGGGCCG GGC CGGCCCCG TGTGTCTGCGAGCCT dapF 158425 - 157559 - | diaminopimelate epimerase TERM 121 157729 - 157703 - G 71 -12.2 -3.17763 | CGGAGAGTCCAGCAA GCCGCGGCGGAT GCC AGCCACCACGGC CGCGCAGGCGCCCGT TERM 122 158199 - 158183 - G 71 -12.3 -3.19157 | opp_overlap 158179 GACGAAGCGGACGAA GCAACGG GCG CCGTTGC CGCAGTGTTCGACTT Rmet_0154 159333 - 158440 - | lipid A biosynthesis lauroyl acyltransferase Rmet_0155 160250 - 159330 - | lipid A biosynthesis lauroyl acyltransferase TERM 123 159397 - 159429 + g 73 -12.1 -3.34233 | gap 1 TGTGTGGTGGCGAAC GTGTCCGG-CGGCA ATTCCG TGCCGGTCGGACAC TTGTAGCGGTTATAC TERM 124 159704 - 159682 - G 72 -9 -4.15044 | GGCTTGCCGAAGAAA GGCGCCCAGG TGC CCTCGCCGCC GCTTGGCACCTGATC Rmet_0156 160510 - 161673 + | S-adenosylmethionine synthetase TERM 125 161713 - 161741 + F 100 -12.4 -5.54885 | gap 1, opp_overlap 161711 161713 TCTGCCGGATCAAGA CCCCGC-CGGTCC TTCG GGAGCGCGCGGGG TTTTTTGTTGATCTT TERM 126 161741 - 161713 - f 74 -12.4 -3.13403 | gap 1, opp_overlap 161713, overlap 161711 TCTGCCGGATCAAGA CCCCGC-CGGTCC TTCG GGAGCGCGCGGGG TTTTTTGTTGATCTT Rmet_0157 161816 - 162709 + | hypothetical protein TERM 127 162722 - 162751 + T 86 -14.3 -3.28712 | gap 1, opp_overlap 162720 162722 TGAAGGCGGGAAATA CG-CCCGTTCCCGT AGC GCGGGAGCGGGGCG TTGTCAGCGCAGCAG TERM 128 162751 - 162722 - T 72 -11.4 -3.36569 | gap 1, opp_overlap 162722, overlap 162720 TGAAGGCGGGAAATA CG-CCCGTTCCCG TAGCG CGGGAGCGGGGCG TTGTCAGCGCAGCAG Rmet_0158 164158 - 162755 - | aldehyde dehydrogenase TERM 129 163058 - 163039 - G 86 -10.6 -4.2074 | TGTCGAACACATAAA GCGCCAGC GGGC GCGGGCGC GCGTTCACGAAGCCG Rmet_0159 164406 - 166088 + | glucose-methanol-choline oxidoreductase Rmet_0160 167681 - 166140 - | methyl-accepting chemotaxis sensory transducer Rmet_0161 169552 - 167867 - | acyl-CoA dehydrogenase-like protein TERM 130 168831 - 168800 - G 90 -15.8 -3.71848 | GCGCGGCACGAAGAA GCACGAGAGCGGCC CGTC GGCCGCGCCCATGC GGGCGACCACCAGAT TERM 131 170805 - 170769 - g 81 -9.3 -4.20696 | CGAGGAAGTGGAAAA GATGGTGTGGTCGATCC GCT GGGGCGCCGACACCATC ATGGATCTGTCCACC Rmet_0162 170011 - 171888 + | thiamine biosynthesis protein ThiC Rmet_0163 172044 - 173276 + | FAD dependent oxidoreductase Rmet_0164 173290 - 173487 + | sulfur carrier protein ThiS thiG 173495 - 174343 + | thiazole synthase TERM 132 174487 - 174431 - g 71 -9.5 -3.72576 | gap 3, opp_overlap 174417 174480 TTGGCCGTGACGAAA CGCCATGGCGCATC-TGGTCGGCGGCGA ATGC TC-CCGCCGCGCTCGAT-CGCCATGACG TGGTGCTGTCCGATG Rmet_0166 174340 - 175470 + | thiamine monophosphate synthase Rmet_0167 175607 - 176041 + | phenylacetic acid degradation-related protein Rmet_0168 176481 - 176038 - | hypothetical protein TERM 133 176085 - 176116 + g 76 -13.7 -3.08679 | opp_overlap 176081 CCGCTTCAAATCGCG CGCGCTCGGTGAT GCCATA GTCGCCGGGCGCG TATTGCATCAGCCAG Rmet_0169 177332 - 176502 - | phosphomethylpyrimidine kinase TERM 134 177405 - 177370 - H 100 -15.4 -4.6856 | overlap 177371 GAAAGACCGGAAAAA TGTGCCTGTTCACGCC GCAA GGCGCGGACAGGCACG CTACAATACCGCCAC TERM 135 177404 - 177371 - H 95 -18.9 -3.40051 | overlap 177370 AAAGACCGGAAAAAT GTGCCTGTTCACGCC GCAA GGCGCGGACAGGCAC GCTACAATACCGCCA Rmet_0170 177630 - 179048 + | S-adenosyl-L-homocysteine hydrolase TERM 136 179432 - 179444 + G 70 -5.5 -4.25283 | overlap 179433 ACCTGCTGCAGGGAT TCGTC GTG GACGG TTTTGGTCCGGCGCT Rmet_0171 179182 - 179529 + | membrane protein of unknown function Rmet_0172 179577 - 180407 + | 5,10-methylenetetrahydrofolate reductase Rmet_0173 180414 - 180776 + | TfoX-like protein Rmet_0174 180828 - 181628 + | hypothetical protein Rmet_0175 182368 - 181634 - | 5-formyltetrahydrofolate cyclo-ligase TERM 137 182408 - 182426 + G 78 -13.8 -3.17392 | GTATATCTGCGCCGT GCCGGGCG CTT CGCCTGGC TTGCGTTCGCAGGTG Rmet_0176 182381 - 184348 + | lytic transglycosylase, catalytic Rmet_0177 184449 - 185471 + | NAD-dependent epimerase/dehydratase TERM 138 186058 - 186092 + G 84 -15 -3.36273 | TCGCGTCGATCTGGA CCGATCTTCGCACGCG CTA CGCGTCCGAAGGTCCG TTCCTGTTCGGCAGC Rmet_0178 185640 - 186329 + | glutathione S-transferase-like protein TERM 139 186760 - 186782 + G 77 -12.6 -3.57561 | overlap 186758 186759 CGGTGCGTATCCTGC GCGTGGCGCG TTT CGCGGCGCGC TTTCACGAATTCACG cca 186333 - 187577 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 140 187620 - 187589 - T 75 -13.7 -2.87683 | overlap 187577 187591 ATAGGGGGCCAGACA TAGGGGGCCAGAC ATAGGG GGCCGGCCCCCTA CAGCAGCTTCCCGAT Rmet_0180 187812 - 187618 - | hypothetical protein Rmet_0181 189034 - 187838 - | hypothetical protein TERM 141 188294 - 188261 - G 72 -8.7 -4.08279 | gap 1, overlap 188258 ATAGTCGATAAAGAA CGCTGCGCCGCGCGCC AGC AGCGCGCC-CACGGCG CGGGTGAATCCTTCC TERM 142 188678 - 188728 + g 82 -16.2 -3.05384 | gap 2 CAGCGCATCCTCGGT TTCGAGCGCGAGCAGCAGGTCGGC GGCGA GCCGGCCGG-TGCCCGCGC-CGAA TTCCATGACCCGCGG Rmet_0182 189069 - 189869 + | short chain dehydrogenase TERM 143 190242 - 190227 - g 77 -4.6 -4.65895 | GTGTCGACCGAAAAA CCGGAC GTCT ACCCGG ATTGCGATGCCGTCG Rmet_0183 189891 - 190289 + | dihydroneopterin aldolase TERM 144 190350 - 190370 + F 77 -11.1 -3.61517 | opp_overlap 190348 190364 GCTCCAGTAGAATGT TGGCCCGTT GAA ACCGGGCCA TTGTTCAGCGCCCGT TERM 145 191046 - 191034 - g 70 -5.5 -4.25104 | CGGCTCGCAGGAAAA CCTGC AGC GCAAG AAGGTGAGCGAAATG Rmet_0184 190405 - 191349 + | PP-loop Rmet_0185 192458 - 191379 - | hypothetical protein Rmet_0186 192473 - 193837 + | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase Rmet_0187 193852 - 195690 + | D-fructose-6-phosphate amidotransferase Rmet_0188 196166 - 196834 + | pilus assembly protein Rmet_0189 196825 - 197367 + | type-4 fimbrial biogenesis pilV transmembrane protein Rmet_0190 197379 - 198107 + | type-4 fimbrial biogenesis transmembrane protein precursor Rmet_0191 198104 - 198700 + | putative type-4 fimbrial biogenesis transmembrane protein Rmet_0192 198697 - 202080 + | putative type-4 fimbrial biogenesis pily1-related protein Rmet_0193 202083 - 202526 + | pilus assembly protein PilE Rmet_0194 202936 - 203532 + | GTP cyclohydrolase II TERM 146 203572 - 203594 + F 100 -17.8 -5.19275 | opp_overlap 203572, overlap 203565 ATGGCTGACACCGAA GGCGCTTCGT ATG ACGAAGCGCC TTTTCTTTTATGCGT TERM 147 203594 - 203572 - f 89 -17.8 -3.1247 | opp_overlap 203565 203572 ATGGCTGACACCGAA GGCGCTTCGT ATG ACGAAGCGCC TTTTCTTTTATGCGT TERM 148 203785 - 203763 - g 79 -2.6 -5.00642 | overlap 203781 GAAGGCAGACAAAAA GGTTATCCAG TTA CTGAATGGCC AGCTCAAGCACGAGC Rmet_0195 203746 - 204222 + | bacterioferritin Rmet_0196 204744 - 205187 + | GCN5-related N-acetyltransferase Rmet_0197 205268 - 206251 + | zinc-binding alcohol dehydrogenase TERM 149 206276 - 206333 + T 93 -16.3 -3.5013 | gap 1, overlap 206277 206280 206281 GCGGGTTTGCCGCCT AGTGACGGTGGCCGCGATGCGCCGCG TGGCCAT CGTGGC-CGTCTCGGCCATCGTCGCA TTGATTGATTTCGAC TERM 150 206277 - 206332 + T 88 -19.8 -2.69596 | gap 1, overlap 206276 206280 206281 CGGGTTTGCCGCCTA GTGACGGTGGCCGCGATGCGCCGCG TGGCCAT CGTGGC-CGTCTCGGCCATCGTCGC ATTGATTGATTTCGA Rmet_0198 207422 - 206274 - | cation diffusion facilitator family transporter TERM 151 206391 - 206447 + g 74 -5 -4.56597 | overlap 206392 206393 CGATAGCGCGTGCCG CACGCGCTGCGGCGTCAGGCTGG-CGTC GTG GGTGACCAGGCTGGCGATGCA-CGCGAA TTTTTCACGGCCCAC Rmet_0199 208398 - 207472 - | LysR family transcriptional regulator Rmet_0200 208470 - 209951 + | isopropylmalate isomerase large subunit Rmet_0201 209944 - 210597 + | 3-isopropylmalate dehydratase, small subunit Rmet_0202 210611 - 211489 + | alpha/beta hydrolase fold TERM 152 212118 - 212147 + G 73 -12.1 -3.33696 | CGCTGGTGGCGGGCG CCAGTTCGGCGGC CAGC GCCGAGGAACTGG TTGGTTGGGCGCACC Rmet_0203 211952 - 212632 + | putative signal peptide protein Rmet_0204 214095 - 212650 - | GntR family transcriptional regulator TERM 153 215154 - 215106 - g 77 -4.6 -4.61231 | gap 2, opp_overlap 215116 GGATATCTGGAAAAA CTGCG-CG-AGATCACCAGCAAGC ACG GCATCCTGCTGATCTTCGACGAAG TGATCACTGCGTTCG Rmet_0205 214386 - 215717 + | beta alanine--pyruvate transaminase TERM 154 215789 - 215775 - g 73 -5.6 -4.42619 | overlap 215776 GAACATTGCAGAAAA CCGGCA GAT CGCCGA AATCCATCACTACGT Rmet_0206 215758 - 217275 + | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 155 217309 - 217330 + F 100 -15.1 -5.75945 | overlap 217326 ACTGTCGGTTGGATC GGGCGTCCC TTAG GGGGCGCCC TTTTTTTTGGCGAGT Rmet_0207 217473 - 218882 + | amino acid permease-associated region Rmet_0208 220283 - 218883 - | GntR family transcriptional regulator TERM 156 218956 - 219014 + g 76 -14.4 -3.04398 | overlap 218958 219005 GAGTTGATGCGCACC CACGCCGTGGTCTCGCCGCCGGGGCG AAAGAAG TGTCCCGGCGCCAGCGCCACGCCGTG GTTTTCGGCCAGCGC TERM 157 220146 - 220135 - G 72 -7.2 -4.21936 | TCGATAACCGGAAAA CGGC TGAT GCCG TGCTCGGCGGCCATT Rmet_0209 220444 - 220782 + | hypothetical protein TERM 158 222456 - 222439 - g 86 -12.7 -3.83026 | GTCGCCCAGAGCAAA CTGGCGC GTGA GCGCCAG CAACTGCGCGCGGCG TERM 159 224101 - 224078 - g 75 -10.3 -3.89524 | ACCCGACGCCACAAA CGCTGGAAC TGGCCC GCTCCAGCG AGGACGAGAAGCAGA Rmet_0210 221032 - 224313 + | methylmalonyl-CoA mutase Rmet_0211 224403 - 224840 + | histidine triad (HIT) protein Rmet_0212 224897 - 225751 + | 3-hydroxybutyryl-CoA dehydrogenase Rmet_0213 226638 - 225859 - | cyclic nucleotide-binding protein TERM 160 226586 - 226555 - G 74 -13.1 -3.1876 | opp_overlap 226570 AATCGTAGGGATTAA CCCGGAATTGTCA TCGGCG TGACAACCCCGGG GGATGGCATCGGCTA Rmet_0214 226793 - 228757 + | AMP-dependent synthetase and ligase Rmet_0215 228774 - 229715 + | ABC transporter-related protein Rmet_0216 229756 - 230670 + | inner-membrane translocator Rmet_0217 230683 - 231759 + | inner-membrane translocator Rmet_0218 231824 - 233161 + | putative branched-chain amino acid transport system substrate-binding protein Rmet_0219 233224 - 234039 + | ABC transporter-related protein Rmet_0220 234054 - 235316 + | putative phenylacetate-CoA ligase Rmet_0221 235819 - 235367 - | hypothetical protein Rmet_0222 236837 - 235860 - | 2-nitropropane dioxygenase, NPD TERM 161 236378 - 236408 + g 82 -6.9 -4.59773 | gap 2, overlap 236378 236379 236381 CACCGGCCGCCACCA G-GATC-AGGCCGTC AAC GCCGGCCTCGATCGC TTTTTCAGCGTGGCG TERM 162 237073 - 237051 - R 100 -10.5 -5.83822 | overlap 237052 CAGAGCCAAAAAAAA GGCCCCGCT GGGTT AGCGGGGCG ATTACCACGAAGACT TERM 163 237072 - 237052 - R 95 -14 -4.08666 | overlap 237051 AGAGCCAAAAAAAAG GCCCCGCT GGGTT AGCGGGGC GATTACCACGAAGAC Rmet_0223 238434 - 237241 - | SAM-dependent methyltransferase Rmet_0224 238747 - 238439 - | hypothetical protein Rmet_0225 239958 - 238765 - | penicillin-binding protein 6 TERM 164 238828 - 238816 - G 71 -10.5 -3.61715 | opp_overlap 238814 CAGGCGGCCGAAGAA GCCGG CCT CCGGC ACTTCCTCGAGCGCC Rmet_0226 240646 - 240002 - | putative transmembrane protein TERM 165 240757 - 240743 - R 100 -9.2 -5.55769 | CGGCACAACAAAAAA CCGGGC TGG ACCCGG CATGGCTCGGCGGGT Rmet_0227 241185 - 240781 - | ferredoxin-like protein Rmet_0228 241551 - 242840 + | C4-dicarboxylate transporter DctA Rmet_0229 242959 - 244965 + | periplasmic sensor signal transduction histidine kinase TERM 166 245964 - 245986 + G 71 -12.7 -3.03159 | overlap 245980 ACCGCCGCTGCGCGA GCGGCGCGA GGACA TCGTGCCGC TGTTCGAGCACTTCA Rmet_0230 245002 - 246336 + | two component, sigma54 specific, Fis family transcriptional regulator Rmet_0231 246473 - 248074 + | histidine ammonia-lyase Rmet_0232 250220 - 248112 - | UvrD/REP helicase TERM 167 248537 - 248563 + g 86 -18 -2.54896 | overlap 248532 GCACGCCGGATTCGT CGCTCGACGCGC TGG GCGGGTCGAGCG TGAGTTCGGTGAGGA TERM 168 249539 - 249570 + g 78 -13 -3.54109 | opp_overlap 249539 CCTGCGCCCAGTAGA GCAGCAGGTCGTCG TAGT CGAGCACCTGCTGC TTCTGCTTGGCTTCC TERM 169 250335 - 250351 + r 84 -9.4 -4.47271 | opp_overlap 250335 CCGGGCAATAAAAAA GGTGCC GCATG GGCACC TTTTCGTTGGGTTTG TERM 170 250351 - 250335 - R 100 -9.4 -5.4505 | opp_overlap 250335 CCGGGCAATAAAAAA GGTGCC GCATG GGCACC TTTTCGTTGGGTTTG Rmet_0233 250913 - 250374 - | thioredoxin-like protein TERM 171 251010 - 251026 + r 84 -9.4 -4.51097 | opp_overlap 250999 CAAATGCGCACTATC TGCGGC ATTCC GCCGCA TTTTCTGGTGATTGA Rmet_0234 251539 - 251042 - | hypothetical protein TERM 172 251205 - 251218 + g 71 -8.1 -4.20148 | GCCACCGTGATGTTG TGGGC GCGT GCCCA TTGTTTTGCGGTGGT Rmet_0235 251570 - 252259 + | hypothetical protein Rmet_0236 252302 - 252946 + | lysine exporter protein LysE/YggA TERM 173 253148 - 253163 + T 73 -10.4 -3.6502 | opp_overlap 253137 253136 GAACCGCCACCGCCA CCGGTG GAGC CACCGG TTTGAGTGGAAGCTG TERM 174 253183 - 253212 + T 100 -23.7 -5.4505 | opp_overlap 253183 AGTGGAAGCTGAAAA TGACGAGGCCCGC GTTT GCGGGCCTCGTCA TTTTTTCTTAGGCGG TERM 175 253212 - 253183 - T 100 -23.7 -4.19506 | opp_overlap 253183 AGTGGAAGCTGAAAA TGACGAGGCCCGC GTTT GCGGGCCTCGTCA TTTTTTCTTAGGCGG Rmet_0237 254758 - 253220 - | Mg chelatase-related protein TERM 176 253731 - 253761 + g 72 -11.1 -3.53811 | gap 1, opp_overlap 253722, overlap 253755 GGGAAATCGGCCTGC CCGGCGGCA-CGCG AGAT CGTGATGCGGCCGG TTTCGAGCGGCTCGC TERM 177 254805 - 254785 - R 100 -18.3 -4.86621 | opp_overlap 254785 AGTGTTAACGAAAAA GGCCACCGG GAT CCGGTGGCC TTTCTGGCATTGAAC TERM 178 254785 - 254805 + r 100 -18.3 -3.92522 | opp_overlap 254785 AGTGTTAACGAAAAA GGCCACCGG GAT CCGGTGGCC TTTCTGGCATTGAAC Rmet_0238 255098 - 254841 - | hypothetical protein TERM 179 255000 - 255012 + g 100 -3.3 -5.50499 | GAAGCCCTGCGTCAT CATGC TGC GCACG TTTTTTTCGATGTCC Rmet_0239 255651 - 256451 + | hypothetical protein Rmet_0240 256504 - 256842 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 180 256891 - 256881 - g 72 -3.2 -4.62054 | TTAAGCAAATGAAAA CCTG GTT CAAG CGAATCCTGACGGCC TERM 181 257838 - 257888 + G 89 -14.6 -3.74747 | opp_overlap 257833, overlap 257834 257839 257841 TGGAAGCCAACGGCA GCGCCGCGCTGGCCTTCGTCAACA CGC TGTTGGCCACGGCCGCCGCGGTGG TTTCCTGGACCTTCG TERM 182 257839 - 257887 + G 89 -18.1 -2.84527 | opp_overlap 257833, overlap 257834 257838 257841 GGAAGCCAACGGCAG CGCCGCGCTGGCCTTCGTCAACA CGC TGTTGGCCACGGCCGCCGCGGTG GTTTCCTGGACCTTC TERM 183 257841 - 257885 + G 85 -17.1 -2.96873 | opp_overlap 257833, overlap 257834 257839 257838 AAGCCAACGGCAGCG CCGCGCTGGCCTTCGTCAACA CGC TGTTGGCCACGGCCGCCGCGG TGGTTTCCTGGACCT Rmet_0241 256874 - 258406 + | ammonium transporter TERM 184 258463 - 258483 + F 100 -15.4 -5.55769 | TCTCTCAGGAGTTTC GCCCCGGC CATGT GCCGGGGC TTTTTTATTCTCGGG TERM 185 258652 - 258670 + F 100 -12.4 -5.76949 | opp_overlap 258652 TCAGGCCATTTGAAA GCGCGACG CCA TGTCGCGC TTTTTTTTGCCCATG TERM 186 258670 - 258652 - f 77 -11.7 -3.60627 | opp_overlap 258652 TCAGGCCATTTGAAA GCGCGAC GCCAT GTCGCGC TTTTTTTTGCCCATG TERM 187 259690 - 259678 - g 75 -4.1 -4.62302 | overlap 259668 259679 259681 GAAGATCGCGAAAAA GTACC GCG AGTAC GGCATCAAGGAAACG Rmet_0242 258869 - 260164 + | glutamate--cysteine ligase GshA Rmet_0243 260189 - 261142 + | glutathione synthetase Rmet_0244 261267 - 261722 + | PTS system fructose subfamily IIA component TERM 188 261743 - 261723 - gf 71 -9.6 -3.75738 | CACCATCATCAATAA GCTCGGGC TTCAT GCCCGCGC ATCCGCCAAGCTCAC Rmet_0245 261691 - 261960 + | HPrNtr TERM 189 262046 - 262069 + G 73 -12.4 -3.38812 | overlap 262044 CATTCCGGTTTCTCG TGGGGTCGCC ATCG GGCGAGCCCA TATTCTTGCGCCGGC TERM 190 262567 - 262579 + G 71 -9.1 -3.72695 | opp_overlap 262567 TCCAGTTCAAGCACA CCGTG TTC CACGG TTTCGTGACGGACCT Rmet_0246 262011 - 263768 + | phosphoenolpyruvate--protein phosphotransferase TERM 191 263782 - 263798 + F 95 -10.9 -4.62069 | opp_overlap 263782 GACGCCACCCTGAAA CCCTGAA GAT TTCAGGG TTTTTAGGGTGCGAA TERM 192 263798 - 263782 - f 77 -10.9 -3.57462 | opp_overlap 263782 GACGCCACCCTGAAA CCCTGAA GAT TTCAGGG TTTTTAGGGTGCGAA TERM 193 263987 - 264000 + F 70 -4.5 -4.56358 | gap 1 GCCGGTGCCGACGCT GCC-CC CAA GGAGGC TTTTGTGTACGTCTG Rmet_0247 264005 - 264310 + | BFD-like (2Fe-2S)-binding region TERM 194 264349 - 264387 + F 100 -17.5 -3.83347 | gap 1, opp_overlap 264340, overlap 264353 AAGAACGCGTGCATT GAGAGCGCGCCCACGGAC GAAA GTCCGAGG-CGCGCTTTC TTGTATTTGCGGTCT TERM 195 264353 - 264383 + F 100 -14.7 -4.52143 | gap 1, opp_overlap 264340, overlap 264349 ACGCGTGCATTGAGA GCGCGCCCACGGAC GAAA GTCCGAGG-CGCGC TTTCTTGTATTTGCG Rmet_0248 264456 - 264935 + | bacterioferritin TERM 196 264995 - 264950 - T 73 -13.2 -2.78798 | gap 1, opp_overlap 264975, overlap 264936 264949 264952 AGCGCGCAGGCAAAG GATTGGCCGCCG-CGCGCGTC GCGAT GACGCGCGGCGACGGCTGGTC AGAAGCGCGGCGTTT Rmet_0249 265904 - 265152 - | UBA/THIF-type NAD/FAD binding fold TERM 197 265964 - 265937 - R 100 -14.9 -5.35815 | gap 1, overlap 265955 GAGATCAAACAAAAA CGGCCCGCCGGT GCAAT ACCG-CGGGCCG CAGGGCTGAAGGCGG TERM 198 265968 - 266026 + r 73 -13.6 -2.71745 | overlap 265983 266004 TACCGCGGGCCGCAG GGCTGAAGGCGGGAAGCGCCACGCGCCA GTG TCGCGCGGCGGGCTTCTCGCGTCCTGCC GTTACTTCTTGCCGG Rmet_0250 267635 - 266028 - | carboxyl-terminal protease TERM 199 267750 - 267739 - R 74 -3.6 -4.82901 | overlap 267741 267742 GGGTGCGGAGAAAAA GACC TGCG GGCC GCCATTCCATGGTGG TERM 200 267823 - 267780 - R 100 -24.6 -3.48276 | gap 1 GTGGCGGCCACACAA CGCGG-CGCGCCTACCCGGGT GCG ACCCGGGCCGGCGCATCCGCG CGCCGGCTGTCAGCG Rmet_0251 269143 - 267833 - | phosphoglycerate mutase TERM 201 269193 - 269155 - H 79 -15.8 -2.75712 | opp_overlap 269157 269159, overlap 269152 CCATTTATCGAAGTA TTCGCGGCGCGGACCGCC CCG GGCGGTCCGCGCCGTTGT TTTGAATTCAAGGAG TERM 202 269157 - 269192 + H 100 -24.8 -4.27316 | gap 1, opp_overlap 269155 269152, overlap 269159 ATTTATCGAAGTATT C-GCGGCGCGGACCGCC CCG GGCGGTCCGCGCCGTTG TTTTGAATTCAAGGA TERM 203 269159 - 269189 + H 100 -29.8 -4.25859 | opp_overlap 269155 269152, overlap 269157 TTATCGAAGTATTCG CGGCGCGGACCGCC CCG GGCGGTCCGCGCCG TTGTTTTGAATTCAA Rmet_0252 269216 - 269473 + | glutaredoxin GrxC TERM 204 269574 - 269586 + F 71 -9.1 -3.83026 | ACCATATGCGCTTTC GTGCG ACA CGCAC TTTCGTGTCCGGCAG TERM 205 269785 - 269820 + F 93 -14.8 -3.81488 | overlap 269786 GATATATGTCCAGCC ATTGCCCAAAGGCGGG GACG CTTGCCTTTGGGCAAG TTCTCTTTAAACGCC TERM 206 269786 - 269819 + F 86 -18.3 -2.88571 | overlap 269785 ATATATGTCCAGCCA TTGCCCAAAGGCGGG GACG CTTGCCTTTGGGCAA GTTCTCTTTAAACGC Rmet_0253 270722 - 272437 + | RNA-directed DNA polymerase TERM 207 272412 - 272429 + F 87 -9.9 -4.386 | CCGTTGTGAAACCGG TGCTGGA GATG TCCAGCA TTTTGTAAGGGCTTG Rmet_0254 272596 - 273114 + | preprotein translocase subunit SecB TERM 208 273134 - 273164 + F 95 -16.3 -3.86015 | gap 1, opp_overlap 273142, overlap 273142 CGACTGCCTGTCGGA CACCAGAACGGGGC TGCG GCCCCGTT-TGGTG TTTCTGCGAGGCGTC TERM 209 273157 - 273142 - f 74 -11.8 -3.46602 | opp_overlap 273134 273142 TGTCGGACACCAGAA CGGGGC TGCG GCCCCG TTTGGTGTTTCTGCG TERM 210 273142 - 273157 + F 84 -11.8 -4.04579 | opp_overlap 273142, overlap 273134 TGTCGGACACCAGAA CGGGGC TGCG GCCCCG TTTGGTGTTTCTGCG TERM 211 273649 - 273625 - g 74 -12.7 -3.21695 | GCACGATGAATTGAA CGCGCTCGGCG TGG CGCCGGGCGAG ATCGAATATGGCGTG gpsA 273233 - 274261 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 212 274491 - 274474 - g 76 -9.1 -4.07568 | gap 1, opp_overlap 274483, overlap 274475 CGTGGTTGTCGAAAA CCGGCCGG GCG CCGGC-GG CAATATTGGCACCGG Rmet_0256 274268 - 275251 + | hypothetical protein Rmet_0257 275735 - 275265 - | RNA methyltransferase TrmH, group 2 Rmet_0258 276627 - 275788 - | amidophosphoribosyltransferases-like protein Rmet_0259 276652 - 277554 + | methyltransferase type 11 TERM 213 277557 - 277597 + F 73 -10.4 -3.70446 | gap 1, opp_overlap 277557 277558, overlap 277534 277558 GCCGCGACCGTGAAA GCGGCGT-CGCGCATGGTT GCGC GACAATGCGCGCGCGCCGA TTGTGTTGACTATCG TERM 214 277586 - 277557 - f 73 -9.9 -3.57144 | opp_overlap 277534 277557 277558, overlap 277558 GCCGCGACCGTGAAA GCGGCGTCGCGCA TGGT TGCGCGACAATGC GCGCGCGCCGATTGT TERM 215 277558 - 277596 + F 73 -13.9 -2.81786 | gap 1, opp_overlap 277557 277558, overlap 277534 277557 CCGCGACCGTGAAAG CGGCGT-CGCGCATGGTT GCGC GACAATGCGCGCGCGCCG ATTGTGTTGACTATC Rmet_0260 277818 - 278333 + | putative transmembrane protein TERM 216 279668 - 279627 - g 73 -12.4 -3.30441 | gap 3 CAGCACCCCCGACAA GCAGGCCAGCCT-CG-CG-GG CAA CCGCGTCGCAGGCTGACCCGC GGTAGCCCCGCATTC Rmet_0261 278395 - 279663 + | cytochrome c oxidase, subunit II Rmet_0262 279706 - 281316 + | cytochrome c oxidase, subunit I TERM 217 281382 - 281325 - f 78 -14.1 -3.23598 | gap 1, overlap 281333 281335 281381 CAAGTAATCCAGTAA TCCAGTAACACCGGCCGGATGCCAGCCC TCG GGGCAGGTATCCGGCCCGC-TAACCAGA TGCTCATGCAGCCCT TERM 218 281375 - 281333 - f 85 -15.4 -3.22884 | overlap 281325 281335 CCAGTAATCCAGTAA CACCGGCCGGATGCCAGCCC TCG GGGCAGGTATCCGGCCCGCT AACCAGATGCTCATG TERM 219 281373 - 281335 - f 95 -20.2 -3.17586 | overlap 281333 281325 AGTAATCCAGTAACA CCGGCCGGATGCCAGCCC TCG GGGCAGGTATCCGGCCCG CTAACCAGATGCTCA Rmet_0263 281571 - 282167 + | cytochrome C oxidase assembly protein Rmet_0264 282170 - 282397 + | putative transmembrane protein Rmet_0265 282495 - 283355 + | cytochrome c oxidase, subunit III TERM 220 283406 - 283434 + T 100 -11 -5.40072 | gap 1, opp_overlap 283401 283406 ATCGAAGAAAGCGAA GCGCCGCGGGAGA GAAA TCTCG-GCGGCGC TTTTTTTCGCGAGGA TERM 221 283434 - 283406 - T 72 -11 -3.38162 | gap 1, opp_overlap 283406, overlap 283401 ATCGAAGAAAGCGAA GCGCCGCGGGAGA GAAA TCTCG-GCGGCGC TTTTTTTCGCGAGGA Rmet_0266 283665 - 283456 - | putative transmembrane protein Rmet_0267 283666 - 284484 + | hypothetical protein Rmet_0268 284471 - 285148 + | putative transmembrane protein Rmet_0269 285154 - 286257 + | cytochrome oxidase assembly TERM 222 286441 - 286477 + G 71 -10.1 -3.57462 | gap 1, overlap 286401 GGTCGGTGCTGATCG GCGGCGC-GGCCGGTA TCTGGC TGCTGGCCGGCGCGGC TTTCGCCATCAACTG Rmet_0270 286254 - 287192 + | protoheme IX farnesyltransferase TERM 223 287179 - 287204 + F 72 -12.6 -3.01712 | ACTACTTCAAGTTCG TGCCGCAGGT CTGACC GCCTGCGGCA TCTTGCCGCGCCCGG Rmet_0271 287277 - 287891 + | electron transport protein SCO1/SenC TERM 224 287920 - 287901 - T 100 -15 -5.00196 | opp_overlap 287901 TCGTAAATAAGAAAA GGCCGGTC TAAT GACCGGCC TTTCTCATTGCGGGG TERM 225 287901 - 287920 + T 95 -15 -4.05446 | opp_overlap 287901 TCGTAAATAAGAAAA GGCCGGTC TAAT GACCGGCC TTTCTCATTGCGGGG Rmet_0272 288880 - 287945 - | RNA polymerase factor sigma-32 Rmet_0273 289212 - 290087 + | Pirin-like protein Rmet_0274 291117 - 290128 - | hypothetical protein Rmet_0275 292019 - 291216 - | nitrate transport ATP-binding subunits C and D TERM 226 291798 - 291776 - G 81 -16.2 -3.01791 | AGTGGTTCTGGAACA CCACGGCCCG CTC CGGGCCGGGG CCGGCGATCTCACGT Rmet_0276 292947 - 292036 - | nitrate transport permease TERM 227 292807 - 292827 + g 82 -16.1 -3.16564 | opp_overlap 292798 292799 TACGAACGCGGCAAG CGCGTCGCG GCG CGCGGCGCG TTGCTCAAGTGCGGC Rmet_0277 294320 - 293016 - | putative nitrate transporter protein TERM 228 294516 - 294528 + r 83 -4.8 -5.07567 | CTTGGGTAACGCAAG CGCT ATGCC AGCG TTTTTTGGGGTGTCG Rmet_0278 295343 - 294684 - | response regulator receiver/ANTAR domain-containing protein TERM 229 295897 - 295876 - g 79 -5.7 -4.66318 | ACGAGTCGAAGAAAA CCGGCCGCC CTTG GGAAACCGG CAAGGCATTCGACAA Rmet_0279 295395 - 296195 + | fumarylacetoacetate (FAA) hydrolase TERM 230 296834 - 296814 - g 86 -16.1 -3.29144 | GGACGCGTTCCAGAA GGCCGCGCC CGG GGCGCAGCC GGACAGCGAGTAAGC Rmet_0280 296200 - 296847 + | maleylacetoacetate isomerase TERM 231 296873 - 296892 + T 100 -15 -5.63236 | opp_overlap 296873 TGCCAGAAACAAAAA CCCCGGTG TCCT CACCGGGG TTTTTGTTTTTGCGT TERM 232 296892 - 296873 - T 100 -15 -5.38054 | opp_overlap 296873 TGCCAGAAACAAAAA CCCCGGTG TCCT CACCGGGG TTTTTGTTTTTGCGT Rmet_0281 297941 - 296919 - | signal recognition particle-docking protein FtsY Rmet_0282 298242 - 299756 + | peptidase M16-like protein TERM 233 299806 - 299856 + G 71 -13.1 -3.01712 | gap 2 GTCTCCGCGTCTGTT GCGCCGGCTTGC--CGGCGCGGCCT TCG GGGCAGCGGCGCTGCTCGCCGGCGC TGTTGCCCACGCAGC TERM 234 300841 - 300823 - g 84 -8.8 -4.5774 | overlap 300829 GACCAAGAAGGAAAA CACCAACG AGG CGCTGGCG CTGGTGCGCGAGATC Rmet_0283 299765 - 301129 + | peptidase M16-like protein TERM 235 301257 - 301281 + G 74 -11.4 -3.65812 | overlap 301258 ATTCGCAATCCCGAC CTTCGCCCGC ACCGC GCGGGCGAAC TTCTGTTCCCCGCAA TERM 236 301258 - 301280 + G 77 -14.9 -2.79273 | overlap 301257 TTCGCAATCCCGACC TTCGCCCGC ACCGC GCGGGCGAA CTTCTGTTCCCCGCA TERM 237 301771 - 301827 + G 90 -15.8 -3.727 | gap 1, opp_overlap 301746 GCTGATCGGCCCCGA TGCGCCGATACCG-GCGTCCCTGGAGA TCGT TCGCCAGGCACGCGCGGGGGCGGTGCA TTTCCATCTGCTGCA Rmet_0284 301238 - 301870 + | hypothetical protein coaD 302082 - 302567 + | phosphopantetheine adenylyltransferase Rmet_0286 302634 - 302894 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 238 302990 - 302952 - T 84 -9.7 -4.55023 | gap 1, opp_overlap 302958, overlap 302958 GGCAAGAGCAGAAAA GAGAAACCCCGCGAAACC GTCA GGTTT-GCGGGGTTTTTT CTTTGGAGCCGGCTG TERM 239 302984 - 302958 - T 100 -13.1 -4.52142 | gap 1, opp_overlap 302958, overlap 302952 AGCAGAAAAGAGAAA CCCCGCGAAACC GTCA GGTTT-GCGGGG TTTTTTCTTTGGAGC TERM 240 302958 - 302984 + T 100 -13.1 -5.63517 | gap 1, opp_overlap 302952 302958 AGCAGAAAAGAGAAA CCCCGCGAAACC GTCA GGTTT-GCGGGG TTTTTTCTTTGGAGC Rmet_0287 303614 - 303018 - | peptidyl-tRNA hydrolase TERM 241 303748 - 303699 - R 100 -14.3 -4.75404 | opp_overlap 303713 303715, overlap 303701 303715 AAAGCGTACGAAAAA GCCGCGCGAAAAAAAACCGCCGG CGAA CCGGCGGTCTTTCTTGATGCGCC AGCGGTTGCGAGACC TERM 242 303746 - 303701 - R 78 -15.5 -2.65772 | opp_overlap 303713 303715, overlap 303699 303715 AGCGTACGAAAAAGC CGCGCGAAAAAAAACCGCCGG CGAA CCGGCGGTCTTTCTTGATGCG CCAGCGGTTGCGAGA TERM 243 303713 - 303734 + r 89 -11.5 -4.24342 | opp_overlap 303701 303699 303715, overlap 303715 AGCCGCGCGAAAAAA AACCGCCGG CGAA CCGGCGGTC TTTCTTGATGCGCCA TERM 244 303715 - 303732 + r 91 -14.1 -3.72374 | opp_overlap 303715 303701 303699, overlap 303713 CCGCGCGAAAAAAAA CCGCCGG CGAA CCGGCGG TCTTTCTTGATGCGC TERM 245 303732 - 303715 - R 100 -14.1 -5.75342 | opp_overlap 303713 303715, overlap 303701 303699 CCGCGCGAAAAAAAA CCGCCGG CGAA CCGGCGG TCTTTCTTGATGCGC Rmet_0288 304400 - 303789 - | 50S ribosomal protein L25/general stress protein Ctc TERM 246 304444 - 304423 - R 85 -12.3 -3.70919 | overlap 304440 TCCAAATGTGAAGAA GGCTGTCCG CGAC CAGACAGCC TCGACTGGCGGCACG TERM 247 304514 - 304487 - R 88 -19.2 -2.70932 | overlap 304470 304468 304466 GCGCCGCCTGAATCA CGTTGGCCGCCC ATTC AGGCGGCCAACG CAGTAAAGCCAAATA Rmet_0289 305524 - 304571 - | ribose-phosphate pyrophosphokinase TERM 248 305326 - 305378 + g 70 -4.8 -4.33767 | GTTCCATCAGGTTGT CGTTGGTCGGCGCGCAGGTCGAC-TG CAG CACGATGACGTGCTTGCCG-CGAACG TTTTCCTGGATTTCT Rmet_0290 306642 - 305764 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 307253 - 306639 - | outer membrane lipoprotein LolB TERM 249 307315 - 307292 - R 90 -15.2 -3.45118 | opp_overlap 307288 307285 307311, overlap 307274 307293 GCACGCCAGAACGAA CCGCCCGGGC ACTG GCCCGGGCGT GCAACGTGCTTGCCT TERM 250 307314 - 307293 - R 85 -18.7 -2.6675 | opp_overlap 307288 307285 307311, overlap 307274 307292 CACGCCAGAACGAAC CGCCCGGGC ACTG GCCCGGGCG TGCAACGTGCTTGCC Rmet_0292 309246 - 307339 - | tetratricopeptide TPR_2 TERM 251 309145 - 309099 - G 74 -11.5 -3.68619 | gap 1, overlap 309093 GGGAAGCGAGCGAAA CCAGCGCCAGGCACGCGGCC ACGCCCAA GGC-GCGCGCATGGCGACGG AAACGTCCGGCGGGG Rmet_0293 309517 - 310410 + | formamidopyrimidine-DNA glycosylase TERM 252 310435 - 310470 + F 84 -9.6 -4.45738 | opp_overlap 310430 GGGGCGCAAAGCCTG TCCGGGACGGTCTGGC ACGC GCCGAACCGGTCTGGA TTTCTTGTTGAAATC Rmet_0294 310668 - 312686 + | hypothetical protein TERM 253 312775 - 312794 + G 100 -12.1 -5.45802 | CCGATGTATCATGTG GCGCCGC CAGTGA GCGGCGC TTTTTCTTTTCAAGA Rmet_0295 312751 - 313968 + | A/G-specific DNA-adenine glycosylase Rmet_0296 314643 - 313990 - | peptidase S16, lon-like protein TERM 254 314685 - 314673 - R 84 -10.5 -4.14739 | opp_overlap 314683 CCAGTCATGGGAAAA CGGCG GGG CGCCG CGCGTCAGCCAGCGG Rmet_0297 315580 - 314690 - | hypothetical protein TERM 255 315046 - 315071 + g 70 -7.5 -4.06611 | opp_overlap 315050, overlap 315049 TGAACCCGAACGATT CAAACAGCAGC GTGA GCTGCTGGCTG TTCTTGTTCTCGTTC TERM 256 315067 - 315050 - G 77 -11.3 -3.71527 | opp_overlap 315049 315046 CCCGAACGATTCAAA CAGCAGC GTGA GCTGCTG GCTGTTCTTGTTCTC TERM 257 315325 - 315347 + g 75 -15 -2.70932 | CATCGGTGCTGGCGG TCAGGTACAG CAC CTGTACCTGA TGGTTCGCGGCCAGC TERM 258 315670 - 315634 - R 93 -15.4 -3.54129 | gap 1, opp_overlap 315626 315640, overlap 315640 GACACCTTCCCTAAA GCAA-AATGGCGAATCG TCGC CGATTCGCCATCATTGC CACGGGATCTGTCAG TERM 259 315640 - 315663 + r 79 -15.4 -2.71011 | opp_overlap 315634 315640, overlap 315626 TTCCCTAAAGCAAAA TGGCGAATCG TCGC CGATTCGCCA TCATTGCCACGGGAT TERM 260 315663 - 315640 - R 100 -15.4 -4.54727 | opp_overlap 315640 315626, overlap 315634 TTCCCTAAAGCAAAA TGGCGAATCG TCGC CGATTCGCCA TCATTGCCACGGGAT Rmet_0298 316066 - 315695 - | putative signal peptide protein Rmet_0299 317213 - 316242 - | HPr kinase/phosphorylase Rmet_0300 317776 - 317282 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 261 317845 - 317824 - R 79 -9.4 -4.14739 | CTATTGAGCGCAAAA GGACGCCC GCATTG GAGCGTCC GGCCATTATAGAGCA TERM 262 317894 - 317858 - R 70 -12.2 -2.94099 | gap 1 TCCGGCCATTATAGA GCAGG-GCCACTGCGCA CTTG TGCGCTGCGGCGCCGGC GCCGCGAGTGGTGCC Rmet_0301 318141 - 317851 - | hypothetical protein TERM 263 318163 - 318146 - R 100 -14.1 -5.14563 | opp_overlap 318146 GCGCCCATCAAAAAA GCCGCGC AGAT GCGCGGC TTTGCTCTTCCTATC TERM 264 318146 - 318163 + r 91 -14.1 -3.96093 | opp_overlap 318146 GCGCCCATCAAAAAA GCCGCGC AGAT GCGCGGC TTTGCTCTTCCTATC Rmet_0302 318567 - 318214 - | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 265 318615 - 318587 - R 70 -10.2 -3.53012 | CTTCTCCTTCTGAAA GAGCCGCACCAG GCAGG CGGTTGCGGCTC GGCTACAAAGTCTTG Rmet_0303 320096 - 318618 - | RNA polymerase factor sigma-54 TERM 266 320042 - 320016 - G 84 -14.5 -3.30124 | CTCCAGTGTGGATAA CTGCAGCAGCC GGATG GACTGCTGCAG TTGAGGAGTCAGAGC Rmet_0304 321011 - 320220 - | ABC transporter-related protein TERM 267 320501 - 320475 - G 78 -13.7 -3.23216 | gap 1, opp_overlap 320474 320473, overlap 320476 GTCGAGCAGGATGAA GCGCG-GCGCCG ACGC CAGCGCGCGCGC GATTTCCACGCGGCG Rmet_0305 321681 - 321037 - | OstA-like protein TERM 268 321275 - 321261 - G 74 -11.4 -3.63627 | opp_overlap 321263 CGCCGACACCGGAAA CACGCG CCG CGCGTG CATTGCCGATCAGCT TERM 269 321636 - 321606 - G 72 -13.3 -3.13403 | gap 1, overlap 321604 GCTGGGCCAGGAACA GGCC-GATGGCGGC GATG GCCGCCATCAGGGC GGGCGCGGTGCGGCG Rmet_0306 322370 - 321744 - | hypothetical protein Rmet_0307 323357 - 322374 - | KpsF/GutQ family protein TERM 270 323542 - 323553 + G 72 -3.6 -4.63527 | overlap 323537 TGACCCTGGTGCTGC TGGC CGCT GCCG TTTTTGGCGTGGTGG Rmet_0308 323463 - 325487 + | sodium/hydrogen exchanger Rmet_0309 325905 - 325477 - | hypothetical protein Rmet_0310 326593 - 325964 - | peptidase C56, PfpI TERM 271 326040 - 326000 - G 93 -17.4 -3.36289 | GAGCACTGCAAGGAA CTGCGCCAGCCAGGCCGG ATGGG CAGGCCAGGCCGGCGCCG TTACCAGGTTGCCGT Rmet_0311 326669 - 327241 + | adenine phosphoribosyltransferase Rmet_0312 327521 - 329197 + | Na/Pi cotransporter II-related Rmet_0313 332118 - 329251 - | excinuclease ABC subunit A TERM 272 330972 - 331009 + g 74 -12.7 -3.2794 | gap 1, overlap 330976 TCGGGATGATCCCTT CGAACGCGTGCGCGCGCA GTG TG-GTGCGGCCGCGTTCG TTGATATACGTGAAC Rmet_0314 332393 - 333649 + | major facilitator transporter TERM 273 333716 - 333734 + F 100 -9.6 -5.00884 | opp_overlap 333711, overlap 333717 CTAGCCAGAACCGCT TCGCTTCA TCC TGAAGCGG TTTTTTAGACACAGT TERM 274 333717 - 333733 + F 77 -10.9 -3.60048 | opp_overlap 333711, overlap 333716 TAGCCAGAACCGCTT CGCTTCA TCC TGAAGCG GTTTTTTAGACACAG TERM 275 333756 - 333778 + F 82 -9.2 -4.34947 | AGACACAGTTTTTTT CGTATCGG TATTAGT CCGATACG TTTTCCTGCTGTATT Rmet_0315 333925 - 334470 + | single-strand DNA-binding protein TERM 276 334501 - 334518 + F 100 -12.7 -5.65496 | opp_overlap 334500 334497 ATCTGTGAAGATTAG CCCCGCT TAAG AGCGGGG TTTTTCTTTTTAATC TERM 277 335192 - 335208 + G 76 -5.7 -4.58395 | opp_overlap 335193, overlap 335193 ATGCTGTTGGAAGGG ACTGCGG AGC CCGCGGA TTTTTACCCCATCAC Rmet_0316 334703 - 335569 + | hypothetical protein Rmet_0317 335757 - 336953 + | phage integrase Rmet_0318 336950 - 337462 + | hypothetical protein TERM 278 337610 - 337632 + T 91 -19.2 -3.18264 | opp_overlap 337610 337613, overlap 337613 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 279 337632 - 337610 - T 90 -19.2 -3.07816 | opp_overlap 337610 337613, overlap 337613 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 280 337629 - 337613 - T 90 -15.1 -3.68569 | opp_overlap 337610 337613, overlap 337610 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 281 337613 - 337629 + T 93 -15.1 -3.73647 | opp_overlap 337613 337610, overlap 337610 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_0319 337856 - 337641 - | hypothetical protein Rmet_0320 338743 - 337910 - | ATPase Rmet_0321 340179 - 338740 - | integrase catalytic subunit Rmet_0322 340860 - 340291 - | hypothetical protein Rmet_0323 341083 - 342111 + | phage integrase Rmet_0324 342116 - 344119 + | hypothetical protein Rmet_0325 344106 - 344498 + | hypothetical protein Rmet_0326 345692 - 344940 - | hypothetical protein TERM 282 345410 - 345389 - G 84 -7.2 -4.83169 | ACGCCCCCAGAAAAA GCGAAGCC AGCAAA GGCATCGC CCAGTATAGAAGACG TERM 283 346057 - 346086 + r 100 -16.6 -4.55689 | opp_overlap 346057 346063, overlap 346063 ACGGAAAGCTATAAA GAAAAACCCCGC TTTTTT GCGGGGTTTTTC TTTTCTATCAGTACT TERM 284 346086 - 346057 - R 100 -16.6 -4.02534 | opp_overlap 346057 346063, overlap 346063 ACGGAAAGCTATAAA GAAAAACCCCGC TTTTTT GCGGGGTTTTTC TTTTCTATCAGTACT TERM 285 346063 - 346080 + r 100 -9.8 -5.58522 | opp_overlap 346057 346063, overlap 346057 AGCTATAAAGAAAAA CCCCGC TTTTTT GCGGGG TTTTTCTTTTCTATC TERM 286 346080 - 346063 - R 100 -9.8 -5.38958 | opp_overlap 346063 346057, overlap 346057 AGCTATAAAGAAAAA CCCCGC TTTTTT GCGGGG TTTTTCTTTTCTATC Rmet_0327 347447 - 346254 - | major facilitator transporter Rmet_0328 348230 - 347466 - | NADPH-dependent FMN reductase Rmet_0329 348649 - 348227 - | arsenate reductase Rmet_0330 349723 - 348659 - | bile acid:sodium symporter Rmet_0331 350232 - 349720 - | protein tyrosine phosphatase Rmet_0332 350786 - 350298 - | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_0333 351119 - 350790 - | ArsR family transcriptional regulator TERM 287 351259 - 351283 + r 72 -11.4 -3.28712 | opp_overlap 351259 CCACAGCCGCAGCAA GGATCCCTGC GCGAG GCGGGGGTCC TTGTGCCCGAAGCAC Rmet_0334 352131 - 351313 - | methyltransferase type 11 Rmet_0335 353860 - 352361 - | lytic transglycosylase, catalytic Rmet_0336 354850 - 354044 - | IclR family transcriptional regulator Rmet_0337 355632 - 354847 - | IclR family transcriptional regulator Rmet_0338 355850 - 356809 + | beta-lactamase-like protein Rmet_0339 356913 - 358667 + | hypothetical protein Rmet_0340 358693 - 358902 + | hypothetical protein Rmet_0341 358986 - 360347 + | major facilitator transporter TERM 288 360353 - 360402 + F 79 -8.6 -4.53349 | gap 1, overlap 360339 360354 360355 360356 GGCGCACTAGCAGGG CGG-TGTTCCCCGATACCGGGCG GTTCA TGCCCGATATCGGGGAAAAATCA TTTGTTTCATGGTTA TERM 289 360354 - 360401 + F 76 -12.1 -3.30925 | gap 1, overlap 360339 360353 360355 360356 GCGCACTAGCAGGGC GG-TGTTCCCCGATACCGGGCG GTTCA TGCCCGATATCGGGGAAAAATC ATTTGTTTCATGGTT TERM 290 360355 - 360399 + F 78 -13.6 -3.20639 | overlap 360354 360353 360356 CGCACTAGCAGGGCG GTGTTCCCCGATACCGGGCG GTTCA TGCCCGATATCGGGGAAAAA TCATTTGTTTCATGG TERM 291 360356 - 360398 + F 83 -17.1 -2.5166 | overlap 360355 360354 360353 GCACTAGCAGGGCGG TGTTCCCCGATACCGGGCG GTTCA TGCCCGATATCGGGGAAAA ATCATTTGTTTCATG TERM 292 361252 - 361233 - g 73 -9.3 -3.90744 | CCCGGCTTCAAACAA GTCGTGG ATGCCA CCACGAC GGGCCTGATGCGCAG Rmet_0342 360492 - 361400 + | extracellular solute-binding protein Rmet_0343 362309 - 361413 - | RpiR family transcriptional regulator TERM 293 363655 - 363695 + G 79 -14.8 -3.01918 | gap 1, opp_overlap 363654 363652 363655, overlap 363653 CCCGGCGAAGAAGAC GCACGCCGTGCTC-AAGCG CACC TGCATGGAGCATGGCGTGC TGGTTTATCCGATGG Rmet_0344 362513 - 363838 + | hypothetical protein Rmet_0345 363850 - 364719 + | hypothetical protein TERM 294 364747 - 364724 - f 78 -7.4 -4.65895 | gap 1 TCGCGGACTGAAAAA GCCCT-CTGGC GAC GACAGCAGGGC GGGGCGGATTCCGGT TERM 295 365041 - 365057 + G 70 -11.5 -3.31461 | ACAATCTTGGCATCG CGCCGCT GCG GGCGGCG TTGTCGGAGTACGTG Rmet_0346 364800 - 365999 + | aspartate aminotransferase Rmet_0347 367537 - 366071 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_0348 368704 - 367550 - | ABC-type multidrug transport system permease component Rmet_0349 369687 - 368701 - | ABC transporter-related protein Rmet_0350 370646 - 369684 - | secretion protein HlyD Rmet_0351 371356 - 370664 - | TetR family transcriptional regulator Rmet_0352 371486 - 372964 + | carbohydrate-selective porin OprB queF 373810 - 372977 - | 7-cyano-7-deazaguanine reductase Rmet_0354 375519 - 373822 - | threonine dehydratase TERM 296 375093 - 375109 + g 76 -13.7 -3.05384 | overlap 375099 GGGCCGCCGCCAGCG CCACGCC CTG GGCGTGG TTGCCTGCCGAAGCA TERM 297 375423 - 375407 - G 95 -10.1 -4.77925 | overlap 375409 AAAAAACCGGAAAAA TCGGCGG AAA CCGCCAA TGATAATGGATGGCG Rmet_0355 375533 - 376351 + | HAD family hydrolase Rmet_0356 376348 - 378210 + | glycoside hydrolase 15-related Rmet_0357 378242 - 379636 + | Alpha,alpha-trehalose-phosphate synthase Rmet_0358 380279 - 379683 - | hypothetical protein Rmet_0359 381313 - 380276 - | sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis / sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis Rmet_0360 381858 - 381295 - | carbon monoxide dehydrogenase subunit G Rmet_0361 383141 - 381855 - | VWA containing CoxE-like protein Rmet_0362 384040 - 383144 - | ATPase Rmet_0363 384917 - 384117 - | molybdopterin dehydrogenase, FAD-binding TERM 298 384511 - 384486 - G 71 -3.9 -4.57073 | gap 1, overlap 384487 GAGCCCCTTGAAAAA GTCGTCCGCCGC GAT GCTGCG-ACGAT CGGTGACGACCGTCG TERM 299 384536 - 384570 + g 78 -15.7 -2.71731 | gap 1 CCGTCGCGTTCAGCC CGAGCACGGCGGCGGG ATAG TCCGCCGCCG-GGTCG TCATTGGCGAGTGAG Rmet_0364 387312 - 384934 - | xanthine dehydrogenase, molybdenum binding subunit apoprotein Rmet_0365 387845 - 387324 - | (2Fe-2S)-binding Rmet_0366 388068 - 388646 + | hypothetical protein TERM 300 389557 - 389547 - g 72 -6.8 -4.29325 | CATCAATACGGAAAA GCTG GAG CAGC TTGGCGAAGTCGAGC Rmet_0367 388816 - 392790 + | FAD linked oxidase-like protein Rmet_0368 392869 - 393303 + | histidine triad (HIT) protein Rmet_0369 393454 - 395364 + | ABC transporter-like protein Rmet_0370 395435 - 395851 + | hypothetical protein TERM 301 395934 - 395953 + G 70 -5.6 -4.28774 | opp_overlap 395935, overlap 395935 CGACGAATCTGAAAA AGCCGGCA AGGT TGCTGGCG TTTTCCATTCGGTGG TERM 302 395952 - 395935 - g 82 -6.9 -4.67904 | opp_overlap 395935 395934 GACGAATCTGAAAAA GCCGGCA AGGT TGCTGGC GTTTTCCATTCGGTG ubiE 395887 - 396618 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 303 396880 - 396845 - g 75 -7.4 -4.25104 | gap 1, overlap 396847 396848 396864 GCCGGCGCAGCAAAA CACGCCGCCGGC-CCAG CAA CCGGCGCAGGCGGCACC GGCTACGGCGGGTGC TERM 304 396878 - 396847 - g 80 -12.2 -3.73042 | gap 1, overlap 396845 396848 396864 CGGCGCAGCAAAACA CGCCGCCGGC-CCAG CAA CCGGCGCAGGCGGCA CCGGCTACGGCGGGT Rmet_0372 396681 - 397670 + | import inner membrane translocase, subunit Tim44 TERM 305 397734 - 397754 + F 100 -16.1 -5.28942 | opp_overlap 397734 397731 397730 GTAGCTTAGAATGGA GGCCCGCGC ATT GCGTGGGCC TTTTTATTTGGGCTG TERM 306 397754 - 397734 - f 72 -13.9 -2.60079 | opp_overlap 397734, overlap 397731 397730 GTAGCTTAGAATGGA GGCCCGCGC ATT GCGTGGGCC TTTTTATTTGGGCTG TERM 307 398269 - 398248 - g 74 -10.1 -3.73775 | gap 1 GTCAGGTGCACGAAA GCGCGACGCG AGC CG-GCCGCGC CCTGCTCGACAATGT Rmet_0373 397791 - 398462 + | hypothetical protein ubiB 398504 - 400081 + | putative ubiquinone biosynthesis protein UbiB TERM 308 400177 - 400196 + F 70 -4.2 -4.56597 | opp_overlap 400165, overlap 400182 GAACCAAGATGGGGA TTTGCCCG CCCT CGGGGGAA TTTTTGCCCCCCGGA TERM 309 400351 - 400361 + F 70 -4.6 -4.56597 | overlap 400344 GCGTCAGGTGCCCCG CCGG CAT TCGG TTTTTCGCCGCCAGG Rmet_0375 400416 - 401852 + | Na+/solute symporter Rmet_0376 402076 - 402405 + | hypothetical protein Rmet_0377 402420 - 403127 + | hypothetical protein TERM 310 404915 - 404880 - g 74 -13.2 -3.1855 | TTCCCGAAGACGCAA CGTGCGCAGGATCTGC TGAC GCAGGCCCCGAGCACG GTCGACGAGAAGCAG aspS 403176 - 404984 + | aspartyl-tRNA synthetase TERM 311 405008 - 405025 + F 100 -14.1 -5.66229 | opp_overlap 405008 CAGACCCGCAAAAAA GCCGCGC CGAT GCGCGGC TTTTTTGTTCTTGGT TERM 312 405025 - 405008 - f 100 -14.1 -5.04385 | opp_overlap 405008 CAGACCCGCAAAAAA GCCGCGC CGAT GCGCGGC TTTTTTGTTCTTGGT Rmet_0379 405163 - 406098 + | putative transmembrane protein ntpA 406145 - 406666 + | dATP pyrophosphohydrolase Rmet_0381 406663 - 407418 + | endonuclease/exonuclease/phosphatase Rmet_0382 407944 - 407435 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 313 407682 - 407705 + g 79 -6 -4.64676 | gap 1, opp_overlap 407681 407682 GGCAGTACCGACAAT GCC-TCGCC GATCTCG GGCGACGGC TTTTCTTCGGGGTAG TERM 314 408817 - 408759 - g 74 -11.5 -3.6715 | opp_overlap 408774 408775 TCACCGAAGTGGAAA CGCTGAC-CACCGCCGCGCGGCAGGCCCG GCG CGAGCATCACGCG-GGCGGCGTGGCTGCG GCATTGCTGCTGCGC Rmet_0383 408002 - 409387 + | phospholipase D/transphosphatidylase TERM 315 409582 - 409593 + F 83 -4.4 -5.15969 | TCGCCAGAATAATCT GAAC GACC GTTC TTTTTTGGCTTAGAC TERM 316 409702 - 409683 - f 82 -12.2 -3.65224 | ACGTCAGGTCAAGAA CAGTGCTC CTGA GAGCACTG CAAAGAACGGAGAAA Rmet_0384 409722 - 410360 + | TetR family transcriptional regulator Rmet_0385 410451 - 412238 + | acyl-CoA dehydrogenase-like protein Rmet_0386 412352 - 414778 + | 3-hydroxyacyl-CoA dehydrogenase Rmet_0387 414803 - 415999 + | acetyl-CoA acetyltransferase TERM 317 416046 - 416005 - f 70 -4.3 -4.55295 | gap 1, opp_overlap 416009, overlap 416006 416007 GCGCGTATAAATAAA GCGCGCCAGGGACAGCCC GACGGGT GGGCTGTCCC-GACCTTC GATCAGGTGAGGAAA TERM 318 416357 - 416377 + G 75 -7.6 -4.26076 | gap 1 TGCTCAAGAACGTGG TGG-CCGGT TGTG ACCGGGCCA TTTTGCTGACCATCG Rmet_0388 416113 - 417069 + | hypothetical protein Rmet_0389 417104 - 417880 + | enoyl-CoA hydratase Rmet_0390 418435 - 417962 - | thioesterase superfamily protein Rmet_0391 418454 - 420346 + | ABC transporter-related protein Rmet_0392 420529 - 421587 + | twin-arginine translocation pathway signal Rmet_0393 421584 - 422429 + | ABC transporter-related protein Rmet_0394 422426 - 423205 + | binding-protein-dependent transport systems inner membrane component Rmet_0395 423731 - 423273 - | AsnC family transcriptional regulator Rmet_0396 424349 - 423795 - | cysteine dioxygenase type I TERM 319 423956 - 423988 + g 71 -10.4 -3.57144 | opp_overlap 423943 TATCGCCGGCTTCGC GCGTCACGGCGCCG ACCTG CGACGCCGTGCGGC TTTCCGGATCCCAGC TERM 320 425426 - 425402 - g 71 -14.2 -2.75535 | overlap 425393 GGAACACGCCAACGA GCGGCGCGGC AGCCA GCAGCGCCGC AAGCGCCAGCTCGTG Rmet_0397 424482 - 425471 + | LysR family transcriptional regulator TERM 321 425486 - 425476 - f 83 -4.6 -5.02074 | TGACCTCGTAAAAAA CCCA TTT CGGG GAGGGGGTAATGATT Rmet_0398 425606 - 426913 + | Glu/Leu/Phe/Val dehydrogenase TERM 322 427016 - 426987 - f 93 -15 -3.727 | opp_overlap 426988, overlap 426988 TGGATGACACCGAAA CGCGGCGACTGG TTTGTT CCAGTCGCCGCT TTTTTATTTCCGGGG TERM 323 426988 - 427015 + F 100 -18.5 -5.63517 | opp_overlap 426987 426988 GGATGACACCGAAAC GCGGCGACTGG TTTGTT CCAGTCGCCGC TTTTTTATTTCCGGG TERM 324 427015 - 426988 - f 86 -18.5 -2.83299 | opp_overlap 426988, overlap 426987 GGATGACACCGAAAC GCGGCGACTGG TTTGTT CCAGTCGCCGC TTTTTTATTTCCGGG Rmet_0399 427217 - 428116 + | extracellular solute-binding protein TERM 325 428138 - 428165 + F 100 -17.2 -4.56775 | opp_overlap 428142, overlap 428142 CGATTGGAGCAGTGC GAAACGGAAGGA GCAG TCCTTCCGTTTC TTTTTGAGGACGCAT TERM 326 428142 - 428161 + F 100 -12.2 -4.85782 | opp_overlap 428142, overlap 428138 TGGAGCAGTGCGAAA CGGAAGGA GCAG TCCTTCCG TTTCTTTTTGAGGAC TERM 327 428161 - 428142 - f 82 -12.2 -3.58343 | opp_overlap 428142 428138 TGGAGCAGTGCGAAA CGGAAGGA GCAG TCCTTCCG TTTCTTTTTGAGGAC TERM 328 428406 - 428419 + G 78 -8.1 -4.37502 | CTTCCGGAACATTCC GCTGC TGGT GCAGC TTTTCATCTGGTACT Rmet_0400 428182 - 428910 + | amino acid ABC transporter permease Rmet_0401 428922 - 429605 + | amino acid ABC transporter permease Rmet_0402 429602 - 430336 + | ABC transporter-related protein TERM 329 430369 - 430397 + T 100 -18.9 -4.58773 | opp_overlap 430361 GACGCAAGCGCCGAG TGCCCCTTCCCGC CAC GCCGGAAGGGGCA TTTTCATTTGGTCAG Rmet_0403 431287 - 430457 - | glutamine amidotransferase, class-II TERM 330 431261 - 431240 - G 79 -6.5 -4.54727 | gap 1, opp_overlap 431251 GCCGGTAAAGGAAAA CGTCACGTCC GTG GG-CGTGGCG CAATTCATGCCTAGA TERM 331 431302 - 431319 + H 82 -12.7 -3.60627 | opp_overlap 431279 431278 431298 TGGCGAAGGCACCGT GCGGCAG GGGG CTGCCGC TTTGCAATAGAATGC Rmet_0404 431492 - 432490 + | tartrate dehydrogenase TERM 332 433677 - 433701 + G 77 -4.9 -4.66609 | opp_overlap 433677, overlap 433685 TTCGGCCCGGCAGAA GCTCGACGC ACACGAC GCGTGGGGC TTTTTCGATGCGATC Rmet_0405 432487 - 433785 + | MOFRL TERM 333 434527 - 434542 + G 72 -6.8 -4.3255 | gap 1, overlap 434530 TGGTCAAGGCCGCGA CGTCGGG CAG CCCG-CG TTTCTTCCTTGGCAC Rmet_0406 433818 - 434852 + | dihydroorotase Rmet_0407 434858 - 435646 + | putative transmembrane protein TERM 334 436035 - 436055 + T 100 -18.3 -5.27335 | opp_overlap 436029 CTTCAGATACGCGAA CGCCCGGCA CAA TGCCGGGCG TTTTTGTTTGGCCGG Rmet_0408 436527 - 436105 - | OsmC-like protein Rmet_0409 437100 - 436756 - | hypothetical protein TERM 335 436972 - 436992 + g 100 -11.2 -5.9663 | TTTGGTGGATTCGAA CCCAAGTC CAACC GACTTGGG TTTTTTTTCGTCTTT rplM 437287 - 437715 + | 50S ribosomal protein L13 rpsI 437730 - 438122 + | 30S ribosomal protein S9 TERM 336 438171 - 438190 + F 100 -15 -5.86061 | opp_overlap 438171 GCAAATCCAGAAAAA CCGCACGC CCTG GCGTGCGG TTTTTTTTCGTCCAA TERM 337 438190 - 438171 - f 100 -15 -4.94992 | opp_overlap 438171 GCAAATCCAGAAAAA CCGCACGC CCTG GCGTGCGG TTTTTTTTCGTCCAA Rmet_0412 438341 - 439096 + | hypothetical protein Rmet_0413 439120 - 439614 + | hypothetical protein TERM 338 439646 - 439663 + F 74 -11.3 -3.54935 | CCCGAGGGCCCAGAG CCCCTTG AAAA CAAGGGG TTTCGGCACGATTTG Rmet_0414 439723 - 440091 + | iron-sulfur cluster insertion protein ErpA TERM 339 440109 - 440142 + T 95 -13.3 -4.08767 | opp_overlap 440111 440117, overlap 440117 CGGGTTCGTCCCCCA AAGAAAAAGCGCACC AGTC GGTGCGCTTTTTTTG TTTTCGGGCCGTCGA TERM 340 440140 - 440111 - T 86 -13.7 -3.53012 | opp_overlap 440109 440117, overlap 440117 GGTTCGTCCCCCAAA GAAAAAGCGCACC AGTC GGTGCGCTTTTTT TGTTTTCGGGCCGTC TERM 341 440134 - 440117 - T 100 -12.7 -5.27335 | opp_overlap 440109 440117, overlap 440111 TCCCCCAAAGAAAAA GCGCACC AGTC GGTGCGC TTTTTTTGTTTTCGG TERM 342 440117 - 440134 + T 100 -12.7 -6.09196 | opp_overlap 440117 440111, overlap 440109 TCCCCCAAAGAAAAA GCGCACC AGTC GGTGCGC TTTTTTTGTTTTCGG anmK 441325 - 440183 - | anhydro-N-acetylmuramic acid kinase Rmet_0416 442722 - 441328 - | peptidase M23B TERM 343 442412 - 442442 + g 88 -15.4 -3.39895 | overlap 442413 ACGCCGAGCCGGCGC AGCAGCGTGGCGAT GGT GTCGCCGCGCTGCA TTCGTTCCTGACGCA TERM 344 442413 - 442441 + g 89 -18.9 -2.63723 | overlap 442412 CGCCGAGCCGGCGCA GCAGCGTGGCGAT GGT GTCGCCGCGCTGC ATTCGTTCCTGACGC TERM 345 442628 - 442611 - G 71 -7.7 -4.14392 | gap 1, opp_overlap 442611 TGCCAAGGGTGAAAA CCGT-GCC AAC GGCGACGG TCAATTGTTTGCGGC Rmet_0417 442941 - 444182 + | tyrosyl-tRNA synthetase Rmet_0418 444196 - 444666 + | D-tyrosyl-tRNA deacylase Rmet_0419 444700 - 445347 + | PBP family phospholipid-binding protein Rmet_0420 445409 - 446083 + | phosphoglycerate mutase TERM 346 446159 - 446178 + T 86 -15 -3.32844 | opp_overlap 446159 CGGTGCAATAAAAAA CTCCCGGC CACG GCCGGGAG TTGTCCAATCGCAGA TERM 347 446178 - 446159 - T 100 -15 -5.4505 | opp_overlap 446159 CGGTGCAATAAAAAA CTCCCGGC CACG GCCGGGAG TTGTCCAATCGCAGA Rmet_0421 446797 - 446213 - | putative lipoprotein TERM 348 446648 - 446693 + g 77 -13.3 -3.38522 | gap 2, overlap 446640 446639 446647 446647 GAACAGCCGGTTCAG CGC-GCCGT-CGGCGCCGGCA TCGATT TCCTGGCGCCGCGCGGCCGCG TCTTTCGAATCGCTG Rmet_0422 447455 - 446844 - | hypothetical protein TERM 349 447638 - 447624 - R 100 -11.4 -5.76949 | GAGGCGCAAAAAAAA GGCCGT GGA ACGGCC TTGGGCGGGATGCGG ruvB 448725 - 447658 - | Holliday junction DNA helicase B ruvA 449376 - 448795 - | Holliday junction DNA helicase motor protein Rmet_0425 450609 - 449431 - | glycerophosphoryl diester phosphodiesterase ruvC 451269 - 450724 - | Holliday junction resolvase TERM 350 451361 - 451393 + r 100 -13.5 -4.25104 | gap 1 GCGCGGGAGAGGCGT CGG-GGCGAGGGCA GCGATG TGCCCTCGCTACCG TTTTAGTGGCGGAAG purH 452970 - 451396 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Rmet_0428 453226 - 452993 - | DNA-binding protein Fis TERM 351 453228 - 453243 + r 70 -3.2 -4.60292 | GCGTTGCGGCTCATG CGGCAA GCAA TTCCCG TTTCTTGTTGTTGTC Rmet_0429 454368 - 453223 - | dihydrouridine synthase TIM-barrel protein nifR3 TERM 352 454466 - 454444 - R 89 -16.3 -3.31022 | AGCAAATATCATGAA GACGGCCCC GTAAG GGGGCCGTC GGGGAACTGCCTGGC Rmet_0430 455744 - 454491 - | hypothetical protein Rmet_0431 456186 - 455722 - | hypothetical protein Rmet_0432 457580 - 456183 - | aminopeptidase P Rmet_0433 458407 - 457709 - | nucleotidyl transferase Rmet_0434 459530 - 458733 - | AzlC-like protein Rmet_0435 460588 - 459542 - | aminoglycoside phosphotransferase TERM 353 463086 - 463108 + G 77 -5.4 -4.64676 | opp_overlap 463085 GCGTTTCCGCAATAC CTCGAACGGT TAC ACCGGGCGGG TTTTCTTCCAGGTGG Rmet_0436 460771 - 463245 + | organic solvent tolerance protein Rmet_0437 463255 - 464736 + | PpiC-type peptidyl-prolyl cis-trans isomerase pdxA 464753 - 465829 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 354 466086 - 466113 + G 72 -8.4 -4.08767 | gap 1, overlap 466090 GCGACCGCCTCGTGG TC-CACGCCGGCG ATG CGCTGGCGTTCGA TTTTGGCAAGCTGCG TERM 355 466090 - 466108 + G 80 -13.8 -3.36823 | overlap 466086 CCGCCTCGTGGTCCA CGCCGGCG ATG CGCTGGCG TTCGATTTTGGCAAG TERM 356 466638 - 466674 + G 79 -4.2 -4.9218 | gap 1, overlap 466640 TCGCGCGAATCGTCG GTGGCGCGGAGCCGCCC GCCC GCGTGGC-CTGAGCCCC TTTTTATCCTGAATA ksgA 465833 - 466669 + | dimethyladenosine transferase Rmet_0440 466712 - 467740 + | tryptophanyl-tRNA synthetase II TERM 357 467746 - 467801 + T 76 -13.2 -3.05596 | gap 1, opp_overlap 467793 467794, overlap 467797 CCCGCAGTGATTCGG CACTGATCG-TTGTCGCCCTTGCCCGC TAC GCGGGAGAGGGCGACAAACCGACGGCG TTCACTACGCCCGTC Rmet_0441 468711 - 467806 - | hypothetical protein Rmet_0442 469125 - 468718 - | glyoxalase I Rmet_0443 470311 - 469433 - | hypothetical protein TERM 358 469720 - 469751 + g 93 -17.2 -3.35679 | opp_overlap 469717 TCGCGGCATAGATGT CCAGCCGCTCCGCC AGCA GGCGGCGCGCCTGG TTCTGCATCCAGCCC Rmet_0444 471069 - 470308 - | phospholipid/glycerol acyltransferase Rmet_0445 471680 - 471099 - | D,D-heptose 1,7-bisphosphate phosphatase glyS 473839 - 471716 - | glycyl-tRNA synthetase subunit beta TERM 359 472616 - 472637 + g 78 -13.7 -3.28712 | gap 1, overlap 472616 GGCCTTGGCCAGTTC GG-CGCCGCG CAT CGCGGCGGCC TTGTCGACCGGGGCG TERM 360 472616 - 472636 + g 70 -13.9 -2.57132 | overlap 472616 GGCCTTGGCCAGTTC GGCGCCGCG CAT CGCGGCGGC CTTGTCGACCGGGGC Rmet_0447 474490 - 473870 - | putative signal peptide protein glyQ 475440 - 474487 - | glycyl-tRNA synthetase subunit alpha TERM 361 474673 - 474724 + g 79 -10.6 -4.10657 | gap 1 GAGCACTTGTTCATA GGCCGGCAGCGC-CAGGCGTGTGCC AGC GGCCTTCTCCTGCGCGCCTTCGGCC TTTTCGCCGGTATCG TERM 362 474869 - 474883 + g 77 -8.5 -4.28361 | TCACCGTAGGTCAGG CGGCG CGTCT CGCCG TTTTCCTGCCATTCG lnt 477456 - 475924 - | apolipoprotein N-acyltransferase Rmet_0450 478436 - 477549 - | CBS transporter-associated protein Rmet_0451 479318 - 478581 - | putative metalloprotease Rmet_0452 480316 - 479321 - | PhoH-like protein TERM 363 479403 - 479358 - G 88 -15.4 -3.30771 | TGATATTCGTCATAA GCCTCGACGATGCGCGCCAC GAGCGG GTGGCGAACAACGTCGACGC TGGTAAAGCGCGTGA TERM 364 479452 - 479469 + g 78 -7.7 -4.36914 | gap 1 CGCGCAGCACGTGCT GC-GCCTC CAC GAGGCCGC TTTTCTGGCCGCGCG Rmet_0453 481689 - 480337 - | tRNA-i(6)A37 thiotransferase enzyme MiaB Rmet_0454 482130 - 481753 - | hypothetical protein Rmet_0455 483978 - 482296 - | putative voltage-gated ClC-type chloride channel ClcB TERM 365 483402 - 483385 - G 74 -12.7 -3.18239 | CACAGAGGCCAGGAA CAGCGGC ATCA GCCGCTG CACGGCCAGTGCGCC TERM 366 484127 - 484150 + H 87 -10.4 -4.36914 | gap 1, opp_overlap 484132 AATCGACCTGTCCCA CCG-AACCTGA CCC TCAGGTTACGG TTTTCTACCCGAGCC TERM 367 485559 - 485514 - g 76 -14 -3.15544 | gap 3 GGCGAGCGTCAGGAA GCGCCGCGCCAACCGCGTCCGGC ACA GCCGG-CGCG--TGGCGAGGCCC GTAACGGCAACGCCG Rmet_0456 484218 - 485840 + | DEAD/DEAH box helicase-like protein Rmet_0457 485852 - 486898 + | serine/threonine protein kinase Rmet_0458 487387 - 486953 - | hypothetical protein Rmet_0459 487717 - 488340 + | two component LuxR family transcriptional regulator Rmet_0460 488468 - 490126 + | pyridoxal-dependent decarboxylase Rmet_0461 490390 - 490136 - | hypothetical protein TERM 368 490482 - 490445 - R 100 -16.5 -4.23892 | opp_overlap 490451, overlap 490451 TCCAACGAGCCAAAA CAAAAAGCCGCAATCCC GTGA AGGATTGCGGCTTTTCA AATAGATGGTGGCGA TERM 369 490451 - 490476 + r 100 -14.8 -4.14739 | opp_overlap 490445 490451 GAGCCAAAACAAAAA GCCGCAATCC CGTGAA GGATTGCGGC TTTTCAAATAGATGG TERM 370 490476 - 490451 - R 100 -15.5 -5.48213 | opp_overlap 490451, overlap 490445 GAGCCAAAACAAAAA GCCGCAATCCC GTGA AGGATTGCGGC TTTTCAAATAGATGG TERM 371 490674 - 490654 - R 100 -8.2 -5.75342 | overlap 490655 GGCTGCCAAAAAAAA CGGCAGGC GCAAG GCCTGCCT GGGAAGCGGAGACCA TERM 372 490673 - 490655 - R 84 -11.7 -4.04482 | overlap 490654 GCTGCCAAAAAAAAC GGCAGGC GCAAG GCCTGCC TGGGAAGCGGAGACC Rmet_0462 492431 - 490734 - | major facilitator transporter Rmet_0463 493110 - 492790 - | hypothetical protein Rmet_0464 494681 - 493107 - | periplasmic sensor signal transduction histidine kinase Rmet_0465 495392 - 494703 - | two component transcriptional regulator TERM 373 496512 - 496479 - g 74 -11.7 -3.57144 | opp_overlap 496486 CGCGCCAGGGTGAAA TCATCGACCTGGGCG TGGA CGCCAAGATCGTTGA GAAGGCCGGCGCCTG recA 495632 - 496693 + | recombinase A TERM 374 496718 - 496741 + F 100 -12.4 -5.79595 | opp_overlap 496718 CGCTGCTTGACGAAA GCCGTCGCAT ACTT GTGCGGCGGC TTTTTTGTTTTCACC TERM 375 496741 - 496718 - f 71 -9.5 -3.72576 | opp_overlap 496718 CGCTGCTTGACGAAA GCCGTCGCA TACTTG TGCGGCGGC TTTTTTGTTTTCACC recX 496732 - 497280 + | recombination regulator RecX TERM 376 497284 - 497305 + F 79 -14.5 -2.88544 | opp_overlap 497281 TTGGGGGAATGACGA GGTATGCGG GCAG CCGCATACC TGTGTACGCATGAGG Rmet_0468 497530 - 498291 + | hypothetical protein sucC 498381 - 499547 + | succinyl-CoA synthetase subunit beta Rmet_0470 499606 - 500487 + | succinyl-CoA synthetase subunit alpha TERM 377 500592 - 500622 + F 85 -17.6 -2.93073 | overlap 500589 500594 GCGCATCGCCGCAAT CGTTGCCCCCGCCT CAG AAGCGGGGGCAATG TCATTCTTGCGACGC TERM 378 500594 - 500620 + F 87 -16.6 -3.01745 | overlap 500592 500589 GCATCGCCGCAATCG TTGCCCCCGCCT CAG AAGCGGGGGCAA TGTCATTCTTGCGAC TERM 379 500764 - 500740 - f 84 -9.9 -4.26188 | TTCAGACATCCAAAA GTTCGCAGTGG GAG CCCCTGCGGAC CTGGAATAACTTAGA Rmet_0471 500801 - 501496 + | integral membrane protein TerC TERM 380 501523 - 501547 + F 100 -19.3 -5.18371 | ATCGCGAGCCTGACA CGGGCGACCCT CAC GGGGTCGCCCG TTTTGTTTTGTAGGG TERM 381 502097 - 502069 - g 75 -10.1 -3.85698 | overlap 502084 GCCTCCGGGCAGAAA GCCGGCGTGATCG AAT CGTTCGCGGCGGC TGGCGCCTGCCCGAA Rmet_0472 501865 - 502413 + | fimbrial protein pilin TERM 382 502638 - 502596 - f 72 -12.6 -3.02461 | gap 1, overlap 502620 CAACTCCCTGGAAGA TGCCTCGGGCCGGG-CGGC ACTCAA GCCGTCCCGGCCAGATGCC AACAACAACTTCCCA Rmet_0473 502738 - 503157 + | fimbrial protein pilin Rmet_0474 503388 - 505175 + | O-antigen polymerase Rmet_0475 505737 - 505198 - | proline-rich region Rmet_0476 506198 - 505734 - | hypothetical protein TERM 383 506476 - 506457 - R 100 -10.7 -5.18726 | opp_overlap 506456 TGTGGACAAGAAAAA GCCAGGG ACGTTG CCCTGGC CTGGTATTCCGGCGC Rmet_0477 506764 - 506519 - | hypothetical protein Rmet_0478 507131 - 506943 - | molybdenum cofactor biosynthesis-like protein Rmet_0479 507316 - 508326 + | ABC transporter, ATP-binding protein-related protein Rmet_0480 509536 - 508286 - | transposase, mutator type Rmet_0481 509546 - 510289 + | hypothetical protein Rmet_0482 510857 - 510375 - | hypothetical protein TERM 384 511374 - 511352 - g 72 -13.4 -3.16191 | GCAGAGCCCGAGCAA GCTCGACGGC CAT GCCGCCAAGC TCGCCGCGTGGCTCA Rmet_0483 511185 - 512711 + | integrase catalytic subunit Rmet_0484 512701 - 513486 + | IstB-like ATP-binding protein Rmet_0485 513493 - 513738 + | hypothetical protein moaC 514538 - 514059 - | molybdenum cofactor biosynthesis protein C TERM 385 515416 - 515461 + G 71 -8.1 -4.19735 | gap 1, overlap 515432 515453 AGCGGCGATGCCGCG GCGGCGCTGGCGATGGGCGGGC AGG GCGCGGCCGTCGCGAAC-CTGC TTTCGTTTTCGCGCG TERM 386 515857 - 515867 + G 72 -8.2 -4.11216 | opp_overlap 515856 GCCTTCGCCAATCAG CGGC TGG GCCG TTTTGCCGATGCCGA Rmet_0487 514576 - 516393 + | peptidase M48, Ste24p Rmet_0488 517010 - 516438 - | hypothetical protein Rmet_0489 518111 - 517074 - | alpha/beta hydrolase fold Rmet_0490 518569 - 518129 - | hypothetical protein Rmet_0491 519644 - 518580 - | lipopolysaccharide heptosyltransferase II TERM 387 519082 - 519127 + g 76 -13.9 -3.09671 | gap 1, opp_overlap 519070 AGACGTGTGCCCGGC GCGATGCCGAAGCGCTCGGCCG TGG CGGCCATGCGCCTGGG-ATCGC TCTTGAGCTTCGGGT Rmet_0492 519912 - 519718 - | hypothetical protein Rmet_0493 520892 - 519972 - | branched-chain amino acid aminotransferase Rmet_0494 520891 - 523968 + | SNF2-related TERM 388 525007 - 525043 + G 79 -10.8 -4.13945 | gap 1, opp_overlap 525006 525007 TTCCCGCCTGGAAAC TCGATCTGCC-GGCGTG CGAT CACGCCCGGCTGGCCGA TTTTCGCGTGGCCGT Rmet_0495 524193 - 525710 + | amidase Rmet_0496 525747 - 527072 + | major facilitator transporter TERM 389 527167 - 527195 + F 88 -18.9 -2.70932 | ATAATGGCTCTTTCG CTGTCGGCCACGC ACT GCGTGGCCGATGG TCCTTCAAGACGGCC TERM 390 527323 - 527348 + G 72 -8.3 -4.17132 | gap 1, overlap 527298 527300 527343 TTCGCCGAGGTGGAG CGCGATGCCTTT CTC GAAGGCG-CGCG TTTCTTCGCCCGTTT Rmet_0497 527260 - 528060 + | AzlC-like protein Rmet_0498 528057 - 528380 + | branched-chain amino acid transport Rmet_0499 529565 - 528432 - | LuxR family transcriptional regulator TERM 391 529464 - 529439 - G 76 -9.8 -4.07568 | gap 1 TCGCGGGGTCGAAAA CCAGGAGCGAG GCGCG CTCGCTC-TGG CTGAGGTCGCATAGC Rmet_0500 530679 - 529627 - | regulatory protein, LuxR TERM 392 529931 - 529956 + g 93 -13.9 -4.09685 | overlap 529932 CCATTCGGGCCGGTG GCGCGGGCCGC CATG GCGGCCTGCGG TTTTGCGGGATCGCA TERM 393 529932 - 529955 + g 88 -17.4 -3.05597 | overlap 529931 CATTCGGGCCGGTGG CGCGGGCCGC CATG GCGGCCTGCG GTTTTGCGGGATCGC TERM 394 530314 - 530286 - G 72 -8.8 -4.00868 | GCATCGAGAAGTAAA CCTCGTAGTGCG GCTGG CGCTCTACCAGG CAGGCCATGTATGAA TERM 395 530541 - 530494 - G 76 -9.1 -4.08279 | gap 1, overlap 530495 ATAGGCGAGAAACAA TTCCTCGACCGGGTTGACCACC TCGTT GACGGTCA-CCTGGTCGCGGAC CGTGTCCCATACCAT pgk 530997 - 532253 + | phosphoglycerate kinase TERM 396 532262 - 532293 + F 86 -13.6 -3.53012 | gap 1 AGGCTGATGACCCGA CAGGCCGG-CGCGGG ACA CCCCCGTCCGGCCAG TTTCCAGAAAAACCA TERM 397 532968 - 532938 - g 74 -10.5 -3.71873 | gap 1 CCACTGACATGGAAA TGGCCCGCCA-GCT CACC AACGTGGCAGGCCA GCCGCACAACCACAA Rmet_0502 532337 - 533776 + | pyruvate kinase Rmet_0503 533897 - 534961 + | fructose-1,6-bisphosphate aldolase TERM 398 534973 - 534991 + F 89 -13.1 -4.09805 | overlap 534987 GTAAATTGTGTCGTT GCCCCGC CTGGT GCGGGGC TTTGCTTCTTCATGG TERM 399 535003 - 535033 + F 71 -6.1 -4.40561 | overlap 535004 535005 GGGCTTTGCTTCTTC ATGGGGCTTCG CATCGCGCT CGAAGCCCCGC TTGTTTTTCAGCCGC Rmet_0504 535064 - 535972 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Rmet_0505 535994 - 536491 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Rmet_0506 536521 - 537765 + | phosphoribosylaminoimidazole carboxylase ATPase subunit Rmet_0507 537781 - 538773 + | translation factor SUA5 Rmet_0508 540398 - 538842 - | D-alanyl-D-alanine carboxypeptidase PBP3 TERM 400 540435 - 540464 + r 70 -3.5 -4.71828 | overlap 540437 540447 GATGGATGACGTGAA TGCGGCCGT TTTCGACCGTTT CCGGCCGCA TTTTGTTGCTGAGGT Rmet_0509 540976 - 540515 - | transmembrane pair TERM 401 540746 - 540706 - G 75 -7.4 -4.26903 | overlap 540730 540733 CCGACGGCAGGAAAA CGAGCAGCAGGCCACCCT CGAAC AGGATCGCGTGCAGCACG CGAATCGCCGGCGTC TERM 402 541798 - 541780 - g 87 -7.3 -4.7261 | AGCGAGGAAAAGAAA CGGCTGC GTGTG GCGGCCG AAGTCTGGTGGGTGG Rmet_0510 541123 - 542058 + | LysR family transcriptional regulator Rmet_0511 543591 - 542098 - | RND efflux system, outer membrane lipoprotein, NodT TERM 403 542545 - 542523 - G 71 -13.4 -3.01712 | GGCCGCCGTCGAACA CGGTGCCGGC CAG ACCAGCACCG ATTGACCAGACGCGG Rmet_0512 546893 - 543591 - | acriflavin resistance protein Rmet_0513 550048 - 546893 - | acriflavin resistance protein Rmet_0514 551641 - 550070 - | secretion protein HlyD Rmet_0515 551784 - 552518 + | two component transcriptional regulator Rmet_0516 552515 - 553798 + | periplasmic sensor signal transduction histidine kinase Rmet_0517 554481 - 553873 - | putative glycerol-3-phosphate acyltransferase PlsY Rmet_0518 555071 - 554580 - | hypothetical protein xerD 556002 - 555094 - | site-specific tyrosine recombinase XerD TERM 404 555284 - 555300 + g 70 -5.7 -4.25056 | overlap 555268 555284 AGCGGGGCGTGAATG CCCGCGT CAC GCGCGTG TTTCTTGATCAGGTG Rmet_0520 556478 - 555999 - | methylated-DNA--protein-cysteine methyltransferase TERM 405 556621 - 556638 + r 82 -11.3 -3.92869 | opp_overlap 556621 AGGCGCAACAAAAAA GGACCTC CGTG GAGGTCC TTTCTCGCTACCTGC TERM 406 556638 - 556621 - R 100 -11.3 -5.45652 | opp_overlap 556621 AGGCGCAACAAAAAA GGACCTC CGTG GAGGTCC TTTCTCGCTACCTGC Rmet_0521 557644 - 556664 - | hypothetical protein Rmet_0522 558365 - 557748 - | hypothetical protein Rmet_0523 558367 - 559419 + | auxin efflux carrier Rmet_0524 560565 - 559432 - | 4Fe-4S cluster binding TERM 407 561014 - 561004 - g 72 -8.2 -4.08216 | overlap 561005 GGAGTGGCCGGAAAA GGCG GGC CGCC TGCTGGGGGAACCTG Rmet_0525 560633 - 561166 + | hypothetical protein TERM 408 561707 - 561687 - g 90 -16.1 -3.43492 | opp_overlap 561677 TGATACCGAGGACAA GCAGCGGCG ATT CGCCGCCGC GCCGCCGCCTGCTGG TERM 409 562168 - 562146 - g 76 -9.8 -4.07568 | opp_overlap 562146 562153 562159 CGTGCGCGTGCAAAA GGCCCGCC GCGTGCA GGCGGACC TGTTCGTGTCGATTC TERM 410 562312 - 562290 - g 76 -6.2 -4.56133 | overlap 562293 562294 GGCCAACAAGGAAAA CAATGCCGAT CTG ATCGGCGGTG CCAATATGGGCAACA TERM 411 562309 - 562293 - g 75 -6.5 -4.38092 | overlap 562290 562294 CAACAAGGAAAACAA TGCCGAT CTG ATCGGCG GTGCCAATATGGGCA Rmet_0526 561160 - 562653 + | cell wall hydrolase/autolysin TERM 412 562703 - 562731 + T 100 -17.5 -3.72576 | opp_overlap 562704 562709, overlap 562704 562709 CTTCACCATGCAAAA AGAAAACGGCGCC TGG GGCGCCGTTTTCA TTTGATCAACGAGCC TERM 413 562704 - 562730 + T 100 -21 -2.83403 | opp_overlap 562704 562709, overlap 562703 562709 TTCACCATGCAAAAA GAAAACGGCGCC TGG GGCGCCGTTTTC ATTTGATCAACGAGC TERM 414 562730 - 562704 - T 100 -21 -4.68593 | opp_overlap 562704 562703 562709, overlap 562709 TTCACCATGCAAAAA GAAAACGGCGCC TGG GGCGCCGTTTTC ATTTGATCAACGAGC TERM 415 562725 - 562709 - T 100 -15.1 -5.2853 | opp_overlap 562704 562703 562709, overlap 562704 CATGCAAAAAGAAAA CGGCGCC TGG GGCGCCG TTTTCATTTGATCAA TERM 416 562709 - 562725 + T 100 -15.1 -4.58773 | opp_overlap 562709 562704, overlap 562704 562703 CATGCAAAAAGAAAA CGGCGCC TGG GGCGCCG TTTTCATTTGATCAA Rmet_0527 563864 - 562773 - | putative lipoprotein transmembrane Rmet_0528 563893 - 564798 + | LysR family transcriptional regulator Rmet_0529 565605 - 564835 - | methyltransferase type 11 TERM 417 565462 - 565429 - G 77 -11.7 -3.78775 | gap 1 CGTTGCAGCAGCAAA GCTCG-CGTGGCCTGC GCC GCAGCCCAGGTCGAGC ACGCGGCTATGCGCC Rmet_0530 565730 - 566524 + | XRE family transcriptional regulator Rmet_0531 567331 - 566573 - | short-chain dehydrogenase/reductase SDR TERM 418 567422 - 567444 + r 89 -12.7 -4.00445 | gap 1, opp_overlap 567422 TCGGCAAATAAAAAA GCGGCCC-GG TTGC CCAGGGCCGC TTCTTCTTGATGCTG TERM 419 567444 - 567422 - R 100 -12.7 -5.63517 | gap 1, opp_overlap 567422 TCGGCAAATAAAAAA GCGGCCC-GG TTGC CCAGGGCCGC TTCTTCTTGATGCTG adk 568140 - 567475 - | adenylate kinase Rmet_0533 569284 - 568475 - | 3-deoxy-manno-octulosonate cytidylyltransferase Rmet_0534 569511 - 569302 - | hypothetical protein Rmet_0535 570610 - 569492 - | tetraacyldisaccharide 4'-kinase Rmet_0536 571173 - 570742 - | biopolymer transport protein ExbD/TolR Rmet_0537 571811 - 571191 - | MotA/TolQ/ExbB proton channel TERM 420 571315 - 571295 - G 70 -4.6 -4.39828 | overlap 571284 571299 AATAGCGCCAGAAAA TCAGCGCC GGGAT GGCGACGA TCAGGCCGAACGCGG TERM 421 571942 - 571979 + H 79 -14.3 -2.89564 | opp_overlap 571924 571923 AGGCGCCACTCTACC CCGCG-ACTTGGCGCGG GGCAAG CCGCGC-AAGTACGCGG TGTCTGCCGTGCGCA TERM 422 573241 - 573229 - g 78 -3.3 -4.8622 | opp_overlap 573235 CGGCTCAAGGAAAAA CTGGC GCA GGCAG GTCTGTTCGATACTG TERM 423 573449 - 573422 - g 79 -2.6 -5.00616 | gap 1, overlap 573423 GCGCTGCGGAAAAAA TCGCC-GCGATGC TCG ACACCGCCAGCGC GAGGCGCGAATGCGA xseA 572770 - 574215 + | exodeoxyribonuclease VII large subunit Rmet_0539 574345 - 574923 + | manganese and iron superoxide dismutase TERM 424 574948 - 574981 + F 93 -15.4 -3.53224 | opp_overlap 574952 574955, overlap 574952 GCAAGTCGAAGCTGA GTAACAAGGCCCTC CTTAGC GAGGGCCTTGTTTC TTTGGGGCGAGGGTG TERM 425 574952 - 574977 + F 100 -14.8 -4.41348 | opp_overlap 574952 574955, overlap 574948 GTCGAAGCTGAGTAA CAAGGCCCTC CTTAGC GAGGGCCTTG TTTCTTTGGGGCGAG TERM 426 574977 - 574952 - f 82 -14.8 -3.18681 | opp_overlap 574952 574948, overlap 574955 GTCGAAGCTGAGTAA CAAGGCCCTC CTTAGC GAGGGCCTTG TTTCTTTGGGGCGAG TERM 427 574974 - 574955 - f 76 -10.7 -3.73534 | opp_overlap 574952 574948, overlap 574952 GAAGCTGAGTAACAA GGCCCTC CTTAGC GAGGGCC TTGTTTCTTTGGGGC Rmet_0540 575083 - 575826 + | TetR family transcriptional regulator Rmet_0541 575999 - 577333 + | major facilitator transporter TERM 428 577379 - 577398 + T 100 -13.6 -5.15969 | opp_overlap 577379 TGGCACGAAAAAAAA CCCGGCAA ATAC TTGCCGGG TTTTTTCACTTGCAC TERM 429 577398 - 577379 - T 100 -13.6 -5.86061 | opp_overlap 577379 TGGCACGAAAAAAAA CCCGGCAA ATAC TTGCCGGG TTTTTTCACTTGCAC Rmet_0542 578500 - 577418 - | hypothetical protein TERM 430 577679 - 577708 + g 72 -8.5 -4.11183 | gap 1 CGCCTGCGCGCATTC GTCCTCGGGCAGGC CCA GCCGGCCCCAG-AC TTCTTTCTGGTCGAA TERM 431 578750 - 578768 + G 77 -11.6 -3.727 | overlap 578755 578756 CGCGCTTGCGATACC CGAGCCGC TGC GCGGCGCG TTTCGATATCGTGCG Rmet_0543 578673 - 579692 + | ferredoxin TERM 432 579847 - 579898 + G 83 -9.3 -4.40804 | gap 1, opp_overlap 579840, overlap 579845 579844 579864 CGAACTGACCCAGGC GGCCTCCACGTCG-GTGGGCGCGT TCTAC ACGCGCTTTCGCGACAAGGAGACC TTTTGTGCGCTGGTG Rmet_0544 579689 - 580357 + | TetR family transcriptional regulator TERM 433 580426 - 580414 - g 70 -2.6 -4.67353 | overlap 580415 GCAGTGATGGAAAAA GCAG GCGCG CCGC TCGTGATCCATGACG Rmet_0545 580390 - 581487 + | zinc-binding alcohol dehydrogenase Rmet_0546 582330 - 581554 - | 3-hydroxybutyrate dehydrogenase Rmet_0547 583731 - 582340 - | citrate transporter Rmet_0548 583966 - 585510 + | sigma-54 dependent trancsriptional regulator TERM 434 586238 - 586256 + G 77 -11.6 -3.71487 | overlap 586239 586250 ACTGCAGCGCCTGCT GGCGCCGG AGC CCGGCGCG TTGTTCCGTCTGCTG TERM 435 586239 - 586255 + G 77 -15.1 -2.8241 | overlap 586238 586250 CTGCAGCGCCTGCTG GCGCCGG AGC CCGGCGC GTTGTTCCGTCTGCT Rmet_0549 585531 - 586619 + | Mg2+ transporter protein, CorA-like protein TERM 436 586739 - 586766 + G 74 -13.4 -3.25823 | opp_overlap 586728 586726 586725 ACGACGAGGCGCTGA TCCGCCGCATCC ACCA GGAAGTGGCGGA TTACTATGACGAAGA Rmet_0550 586714 - 587664 + | hypothetical protein Rmet_0551 587873 - 589606 + | hyicolysin Rmet_0552 590779 - 589658 - | molybdate metabolism transcriptional regulator TERM 437 590349 - 590328 - G 78 -7.3 -4.42386 | gap 1, overlap 590329 TGTTCATCGAGAAAA TCGCG-TAGC GCG GCCACCGCGA ATCCGTGGCTGGCAT Rmet_0553 590893 - 591402 + | NADH dehydrogenase (ubiquinone), 24 kDa subunit Rmet_0554 591399 - 592955 + | respiratory-chain NADH dehydrogenase domain-containing protein TERM 438 593014 - 592985 - f 100 -9.9 -5.63103 | gap 1, overlap 592988 CGGCAATCAAAAAAA GCACGACGCGCTCC TCA GGAGCGCG-CGACC TCACAGCAGTGAAAG TERM 439 593011 - 592988 - f 90 -14.6 -3.55657 | gap 1, overlap 592985 CAATCAAAAAAAGCA CGACGCGCTCC TCA GGAGCGCG-CG ACCTCACAGCAGTGA Rmet_0555 593044 - 595917 + | formate dehydrogenase, alpha subunit TERM 440 596563 - 596534 - g 73 -9.1 -3.9009 | overlap 596521 AACGCACTCGACAAA CTGGCCGGCGCGC TGGC GCGGGGCGGCGAG GACGTGAGTCATGGC Rmet_0556 595934 - 596779 + | formate dehydrogenase family accessory protein FdhD Rmet_0557 596788 - 597030 + | formate dehydrogenase delta subunit Rmet_0558 597735 - 597040 - | glycosyl transferase family protein Rmet_0559 598877 - 597825 - | malate/L-lactate dehydrogenase Rmet_0560 600459 - 598936 - | anion transporter Rmet_0561 600720 - 601559 + | protein tyrosine/serine phosphatase Rmet_0562 602773 - 601556 - | acetate kinase Rmet_0563 603747 - 602797 - | phosphate acetyltransferase Rmet_0564 604054 - 606318 + | hypothetical protein Rmet_0565 606409 - 607188 + | enoyl-(acyl carrier protein) reductase Rmet_0566 607294 - 607536 + | hypothetical protein Rmet_0567 607647 - 608453 + | ModE family transcriptional regulator Rmet_0568 608460 - 608999 + | adenylate cyclase Rmet_0569 609703 - 608969 - | ABC transporter-related protein Rmet_0570 610416 - 609700 - | molybdate ABC transporter permease Rmet_0571 611211 - 610435 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 441 611494 - 611512 + G 86 -16 -3.21416 | opp_overlap 611480 611475 611473 ACTCCATCGCATCCA GGCCGCGA CGC TCGCGGCC TTGCTGGTGGGGGTG Rmet_0572 611474 - 613582 + | 5'-nucleotidase-like protein Rmet_0573 613597 - 614400 + | Sel1 Rmet_0574 617162 - 614604 - | fimbrial biogenesis outer membrane usher protein Rmet_0575 617935 - 617165 - | pili assembly chaperone Rmet_0576 618569 - 618021 - | fimbrial protein TERM 442 619378 - 619396 + G 72 -11.6 -3.54475 | overlap 619379 CCGATGCCGACGGGA ACGCGCGC GAT GCGCGCGG TTATGTGGTGGAGGA TERM 443 619379 - 619395 + G 75 -15.1 -2.72471 | overlap 619378 CGATGCCGACGGGAA CGCGCGC GAT GCGCGCG GTTATGTGGTGGAGG Rmet_0577 619011 - 619532 + | nucleoside 2-deoxyribosyltransferase Rmet_0578 620124 - 619537 - | hypothetical protein Rmet_0579 621761 - 620121 - | hypothetical protein TERM 444 620725 - 620739 + g 91 -8.6 -4.84359 | AACTCCACCACTACG GGCATT CGG AATGCC TTTTTGTCGCGCTGG Rmet_0580 622494 - 621745 - | paraquat-inducible protein A TERM 445 622478 - 622451 - G 71 -14.2 -2.78463 | gap 1, opp_overlap 622451 AGCTCCGCCATCACA TCG-GCGGCCACG CGC CGTGACCGCGCGA TCTGGTCGCGTGCCA TERM 446 622553 - 622582 + r 73 -10.6 -3.58343 | overlap 622546 622551 GCGTGGGCTCCTGCG CGCCGGGCGGGG TGTCAT CTCCATCCGGCG TTTCCAGGTAATGCC Rmet_0581 623222 - 622533 - | paraquat-inducible protein A Rmet_0582 624318 - 623215 - | hypothetical protein TERM 447 623678 - 623663 - G 70 -5.4 -4.37092 | gap 1 ACGGCTTGCACAAAA GCGGTGC CGA GCAC-GC CGTAGACCACGCCCT Rmet_0583 625535 - 624405 - | CBS domain-containing protein Rmet_0584 625583 - 627496 + | Cl- channel, voltage gated TERM 448 627571 - 627584 + F 80 -3.1 -5.0538 | GGATAGCAATTTGGT CAGTT TGTT AGCTG TTTTTTGACGTGCGA TERM 449 628073 - 628037 - g 78 -13.8 -3.21099 | gap 2, opp_overlap 628036 628035 GGTTGCTATCAGGAA GGCGCGGGCGACTGCATC TGG GATGC-GTCGCGCG-GCC ACTTCTGGGCCGGCT Rmet_0585 627653 - 628531 + | amidinotransferase Rmet_0586 628544 - 629644 + | ornithine cyclodeaminase TERM 450 629696 - 629725 + T 85 -17.9 -2.62616 | opp_overlap 629699, overlap 629699 GTGCGCCCAATGGCA CAACGGCCCGGAC TTGC GTCGGGGCCGTTG TCGTATCGGGAATCA TERM 451 629722 - 629699 - T 81 -13.8 -3.36492 | opp_overlap 629696 629699 CGCCCAATGGCACAA CGGCCCGGAC TTGC GTCGGGGCCG TTGTCGTATCGGGAA TERM 452 629699 - 629722 + T 86 -13.8 -3.46602 | opp_overlap 629699, overlap 629696 CGCCCAATGGCACAA CGGCCCGGAC TTGC GTCGGGGCCG TTGTCGTATCGGGAA Rmet_0587 630346 - 629747 - | excisionase/Xis, DNA-binding TERM 453 630201 - 630215 + g 81 -12.8 -3.66908 | overlap 630197 GTTTCCTTGTGGATA CGGCGG TGG CCGCCG TTGGTTTTCCAGGCG TERM 454 630466 - 630485 + r 74 -5.6 -4.45765 | GACCCTGATGCGTGC GACCCGCT CCCC GGCTGGTC TTTGTTGCTTTTGCA Rmet_0588 632205 - 630829 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 455 631830 - 631849 + g 73 -12.2 -3.36327 | opp_overlap 631847, overlap 631814 631847 GGCAGGTGGCCACGA GCCGTTCT GGCG AGAACGGC TTCTCGATGAAATCG Rmet_0589 633967 - 632195 - | histidine kinase TERM 456 633837 - 633864 + g 80 -15.6 -2.82015 | gap 1 CGCAGTTGCACCTGG CCGCGCTCGGCCT GGC GGGCC-AGCGCGG TGTCGTACGTATAGC TERM 457 634187 - 634159 - R 100 -18.2 -5.54079 | CCAAAAAGCAAAAAA GGCCCGGTTACC TGATC GGCAACCGGGCC CTGGCACGCCTGGGA Rmet_0590 635518 - 634211 - | sodium:dicarboxylate symporter TERM 458 635752 - 635729 - R 100 -18.2 -4.86621 | ATGCGGAAGCAAAAA CGCCGTTCGG ATTT CCGAACGGCG CAGGGGGAGAGGAAG Rmet_0591 639177 - 635812 - | putative sensor protein TERM 459 635942 - 635975 + g 79 -14.6 -2.93723 | gap 1, overlap 635938 TCGTCCTCGACCCAT TCGGCCACCGTGCGC ACCCC GAGC-CGGTGGCCGA TGTCGTTGATCGAGC TERM 460 636559 - 636608 + g 77 -11.5 -3.72695 | opp_overlap 636564, overlap 636564 GGCCTCCAGCGCCGA GTGAATGCCCGCCGCCACC-TCG AGTTCG CGATGGTGGCGCCTGGCAT-CGC TTTCGTCGCGGCGAT TERM 461 636604 - 636564 - G 72 -13.3 -3.05816 | gap 1, opp_overlap 636559 636564 CCAGCGCCGAGTGAA TGCCCGCCGCCACC-TCG AGTTCG CGATGGTGGCGCCTGGCA TCGCTTTCGTCGCGG TERM 462 637029 - 637057 + g 89 -13.1 -4.07568 | opp_overlap 637005 637000 GGTGTCCGAGCAGGC GCGCCTGCTCG CACGCCT CGCGCAGGCGC TTTTCGAACCAGGCC Rmet_0592 639455 - 639856 + | hypothetical protein Rmet_0593 640023 - 640901 + | hypothetical protein Rmet_0594 641064 - 641522 + | (2Fe-2S)-binding Rmet_0595 641532 - 643784 + | twin-arginine translocation pathway signal Rmet_0596 644681 - 643881 - | putative transmembrane transcriptional regulator (anti-sigma factor) Rmet_0597 645297 - 644668 - | RNA polymerase sigma factor Rmet_0598 645540 - 646430 + | twin-arginine translocation pathway signal TERM 463 646526 - 646558 + G 93 -17.8 -3.39449 | gap 1 CGGAGTGATGCCGCG GCGCCGCGCGTG-AT CCCG ATGCGCGCGCGGCGC TTCGTGTTCATCCCA Rmet_0599 646427 - 646801 + | cytochrome c oxidase, subunit II Rmet_0600 650047 - 646847 - | acriflavin resistance protein Rmet_0601 651446 - 650067 - | secretion protein HlyD TERM 464 651351 - 651375 + g 71 -9.3 -3.79396 | ACAAGCATAGTCCGT GGCTGTCATGT GAG ATATGACCGCC TTATTACTGATTATT Rmet_0602 651560 - 651844 + | hypothetical protein Rmet_0603 651978 - 653267 + | putative integral membrane sensor protein Rmet_0604 653264 - 654487 + | esterase/lipase-like protein Rmet_0605 656787 - 654484 - | patatin TERM 465 656400 - 656427 + g 73 -12 -3.35813 | gap 1 ATTCGAAACTGTCCT CGCGCAGCGTCTG CGG CAGGTGC-GCGCG TTCGTTACGGTCGAA TERM 466 656769 - 656737 - G 88 -11.2 -4.22883 | gap 1 GAGCAGGCAAAACAA GGGCAGC-CAGCGCA GCGG TGCGCGGCGCGGCCC GGAAACGAGTCTCGA Rmet_0606 658705 - 656906 - | sulphate transporter Rmet_0607 659721 - 658789 - | hydroxymethylglutaryl-CoA lyase TERM 467 659638 - 659656 + g 79 -6.6 -4.48987 | overlap 659640 CAGCGCCACCTTGAC GTCGGTGG GCA CCATCGCC TTTTCATTCTGCAGC Rmet_0608 661962 - 659923 - | 3-methylcrotonoyl-CoA carboxylase, alpha subunit TERM 468 661186 - 661212 + g 89 -16.5 -3.19463 | opp_overlap 661167 661163 GCGCGCCGCGGCCAC CGCCGCCTCGC CCATC GCGCGGCGGCG TTCCTCGGTCATGCC Rmet_0609 663583 - 661976 - | carboxyl transferase TERM 469 663403 - 663443 + g 100 -19.8 -3.28712 | gap 1, overlap 663442 GGTCGAGCAGTTGCT GCACGCGGTCGCGCGGCAG CAGC TTGCCGCGCGACAG-GTGC TTGTCGCGCGCGGCC Rmet_0610 665300 - 663588 - | acyl-CoA synthetase TERM 470 665455 - 665498 + H 70 -12.3 -2.90075 | gap 2, opp_overlap 665450 TAACATTCAACTTTC GGGCGCGCGCGGTCGGACAGG CGTG CC-GAGCG-CCGCTCGCGCCC TATAATTCCGGGCCA TERM 471 666145 - 666193 + G 72 -11.6 -3.48593 | gap 2, overlap 666146 CATGATCGCGCTGCT GTGGCCC-GCGCTGCAGCC-GCAG AAC CTGCAGGCCGCCGCGCTGGGGCAG TTCTATGGCGAGGTC TERM 472 666146 - 666192 + G 75 -15.1 -2.68942 | gap 2, overlap 666145 ATGATCGCGCTGCTG TGGCCC-GCGCTGCAGCC-GCAG AAC CTGCAGGCCGCCGCGCTGGGGCA GTTCTATGGCGAGGT Rmet_0611 665546 - 666292 + | TetR family transcriptional regulator Rmet_0612 666464 - 667159 + | two component LuxR family transcriptional regulator TERM 473 668751 - 668805 + GT 74 -12.7 -3.14931 | gap 2, opp_overlap 668745 668754 668755, overlap 668754 668796 CGTGATGAAGCACAG CAAGGCCAGC-CGCGCG-GACGTCGCG GTA CGCGTCGGCGCGCGCGGGCTGGAGCTG TTGGTCAGCGATAAC TERM 474 668802 - 668754 - gT 77 -13 -3.33361 | gap 2, opp_overlap 668751 668754 668796, overlap 668745 668755 GATGAAGCACAGCAA GGCCAGC-CGCGCG-GACGTCGCG GTA CGCGTCGGCGCGCGCGGGCTGGAG CTGTTGGTCAGCGAT TERM 475 668754 - 668803 + GT 74 -12.8 -3.1372 | gap 3, opp_overlap 668745 668754 668755, overlap 668751 668796 GATGAAGCACAGCAA G-GCCAGC-CGCGCG-GACGTCGCG GTA CGCGTCGGCGCGCGCGGGCTGGAGC TGTTGGTCAGCGATA TERM 476 668801 - 668755 - gT 81 -16.5 -2.59534 | gap 2, opp_overlap 668754 668751 668796, overlap 668745 668754 ATGAAGCACAGCAAG GCCAGC-CGCGCG-GACGTCGCG GTA CGCGTCGGCGCGCGCGGGCTGGA GCTGTTGGTCAGCGA Rmet_0614 674208 - 668983 - | Outer membrane autotransporter barrel Rmet_0613 667171 - 669108 + | periplasmic sensor signal transduction histidine kinase TERM 477 674507 - 674529 + FH 76 -9.2 -4.13654 | opp_overlap 674503 GTACCCGAAACCCGA TGGTCGTC GCTATCA GACGACCA TTTGTGATTTAACAC groES 674569 - 674859 + | co-chaperonin GroES groEL 674944 - 676587 + | chaperonin GroEL TERM 478 676630 - 676655 + T 100 -16.1 -4.8622 | opp_overlap 676630 CCTGTCTGAGAAAAA CCCCCGATGGC GCGA GCCCTCGGGGG TTTTTCATTGGCCGG TERM 479 676655 - 676630 - T 100 -16.1 -4.82901 | opp_overlap 676630 CCTGTCTGAGAAAAA CCCCCGATGGC GCGA GCCCTCGGGGG TTTTTCATTGGCCGG Rmet_0617 677321 - 676887 - | hypothetical protein Rmet_0618 679999 - 677318 - | ATPase AAA-2 Rmet_0619 680569 - 680084 - | hypothetical protein Rmet_0620 682302 - 680584 - | OmpA/MotB Rmet_0621 682969 - 682313 - | hypothetical protein Rmet_0622 683796 - 682966 - | hypothetical protein Rmet_0623 683888 - 684322 + | hypothetical protein Rmet_0624 685939 - 684362 - | hypothetical protein Rmet_0625 686480 - 685965 - | hypothetical protein Rmet_0626 686770 - 689439 + | Rhs element Vgr protein Rmet_0627 689436 - 691403 + | phospholipase D/transphosphatidylase TERM 480 691881 - 691901 + G 72 -6.7 -4.27584 | opp_overlap 691872 CGCAAAGCTGCCGAT CTGGGCAAC GCC GACGCCCAG TTTTACGTTGGCGAT Rmet_0628 691407 - 692714 + | Sel1 Rmet_0629 692711 - 692911 + | putative phospholipase protein TERM 481 693987 - 693939 - g 72 -10.9 -3.4582 | gap 1, overlap 693937 693973 CCACTTCAGCAAAGA CCGCGCAGACGGCGACCTCGGC GCCGGA GCAGAAGTCGCTG-CCGCTCGG TACTGAGGCGAGTAC Rmet_0630 692915 - 694213 + | Sel1 Rmet_0631 694310 - 694564 + | hypothetical protein Rmet_0632 694531 - 695808 + | hypothetical protein TERM 482 697385 - 697365 - g 86 -6.8 -4.84761 | ACACCGGGAGAAAAA CAGGCTCT GGCCG AGCGCCTG TTCAAGTTCTACGCG Rmet_0633 695874 - 699221 + | ImcF-related TERM 483 699898 - 699914 + G 74 -10.1 -3.71527 | overlap 699904 CCGAGCCGGCCCGTC CGGCGCT CGA AGCGCTG TTTCGCTGGTTCGAG Rmet_0634 699369 - 700940 + | ImpA-like protein Rmet_0635 700962 - 702782 + | hypothetical protein Rmet_0636 702800 - 703888 + | hypothetical protein Rmet_0637 703925 - 704494 + | hypothetical protein Rmet_0638 705416 - 704628 - | metallophosphoesterase TERM 484 705546 - 705528 - R 100 -16 -4.49337 | GCAGAATGCAGAAAA GCCCGGAC ACT GTCCGGGC AAGACTGTCCACCTG Rmet_0639 706595 - 705624 - | type II secretion system protein TERM 485 705951 - 705933 - G 71 -12.4 -3.28712 | opp_overlap 705929 705948 TTTCTCCTTCGAGAA GCCGGAGC GGA GCTCCAGC AGCATCAGTTGCAGT Rmet_0640 707624 - 706647 - | type II secretion system protein Rmet_0641 709037 - 707667 - | type II secretion system protein E Rmet_0642 710293 - 709100 - | response regulator receiver domain-containing protein Rmet_0643 710812 - 710354 - | TadE-like protein Rmet_0644 711339 - 710809 - | TadE-like protein Rmet_0645 712653 - 711349 - | hypothetical protein Rmet_0646 713023 - 712676 - | putative lipoprotein Rmet_0647 714921 - 713059 - | type II and III secretion system protein TERM 486 713137 - 713153 + g 83 -15.1 -3.27475 | overlap 713135 CGCAGTGGCCTCGAT GCGCGCG ACA CGCGCGC TGTTGTCCTCGGGCG Rmet_0648 715854 - 715009 - | Flp pilus assembly CpaB Rmet_0649 717311 - 715899 - | ATPase Rmet_0650 717858 - 717355 - | peptidase A24A, prepilin type IV TERM 487 717861 - 717873 + r 70 -4.7 -4.43477 | GGATGGTGGTCATGG CGTGC TCG GCTCG TTTTGGTTGGGTGCG Rmet_0651 718069 - 717896 - | Flp/Fap pilin component Rmet_0652 718283 - 718110 - | Flp/Fap pilin component TERM 488 718362 - 718325 - R 80 -14.9 -3.05463 | opp_overlap 718317 ATGGCTGGTATCGAA GGCTGCGACGTGGCC CATGTACC GGCCACGTCGCAAAC CGTCGAGCTGTTAGC Rmet_0653 718546 - 718373 - | Flp/Fap pilin component TERM 489 718682 - 718670 - H 73 -9.1 -3.95584 | CGCGCAGCAATGAAA TGGCC AAC GGCCA GCGCCGACGCTTGCG TERM 490 718836 - 718788 - H 78 -13.7 -3.13164 | opp_overlap 718787 GCGCGAACCATGCAA CGGTAGGGCACGCTGCCGCCGCT GCG AGCGGCGGCAATGCGACCCATAG TCCGATGCATTCTCA TERM 491 719070 - 719110 + H 76 -5.5 -4.68908 | gap 3, overlap 719072 GCGGAATGCCGCGTT TC-GGGCCCGCGTCGTTGCC AGCT GGAAACG-C-TGGGCCCTGA TTTATTTTGGATGAG Rmet_0654 719666 - 720922 + | hypothetical protein Rmet_0655 720924 - 722162 + | hypothetical protein TERM 492 723195 - 723222 + G 82 -4 -5.00616 | gap 1, overlap 723162 GCCGCGTCATTCCGA TCGCGGCCGCCGC CAA GCGGCA-CTGAGA TTTTTTGAAGCCGCC Rmet_0656 722204 - 723220 + | glycosyl transferase family protein Rmet_0657 724471 - 723245 - | hypothetical protein Rmet_0658 724993 - 724547 - | GtrA-like protein Rmet_0659 726404 - 725028 - | sigma-54 dependent trancsriptional regulator Rmet_0660 728376 - 727435 - | LysR family transcriptional regulator Rmet_0661 728454 - 729710 + | major facilitator transporter TERM 493 729713 - 729702 - f 76 -5.8 -4.66609 | opp_overlap 729702 TACTTGATGGAAAAA CGCT CCTG AGCG TTCTCCGGGAGGCGC Rmet_0662 730033 - 730821 + | putative integral membrane sensor protein Rmet_0663 731403 - 730867 - | hypothetical protein Rmet_0664 732241 - 731417 - | hypothetical protein Rmet_0665 732857 - 732255 - | hypothetical protein TERM 494 733154 - 733107 - H 100 -9.1 -5.22039 | gap 1, opp_overlap 733107, overlap 733109 GCCAAAGCCAAAAAA CAGTCGCTCGTCTGACCGGAGC GCACT GTTCCG-TCAGATGGGCGACGG AACAGTACCGGTCGA TERM 495 733152 - 733109 - H 84 -10.3 -4.23298 | gap 1, opp_overlap 733107, overlap 733107 CAAAGCCAAAAAACA GTCGCTCGTCTGACCGGAGC GCACT GTTCCG-TCAGATGGGCGAC GGAACAGTACCGGTC TERM 496 733378 - 733390 + G 75 -10.5 -3.83409 | GCCACTTCAGCGTCA CCGGC ATC GCCGG TTTCGTCGTATGTGG TERM 497 734086 - 734120 + G 80 -15.1 -3.06915 | gap 1, opp_overlap 734064, overlap 734088 CGCCGATGACCTGCG CATCGCCG-GAACTGG CGAA CCAGCTCGCGGCGATG TTCGATGCGATGGAT Rmet_0666 733257 - 734165 + | dihydrodipicolinate synthase Rmet_0667 735444 - 734152 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 498 734248 - 734230 - G 71 -12.4 -3.25823 | opp_overlap 734238 CTTGGCCGACACGAA GCCGGCCT CGA AGGCCGAC GGCGCCAGGTAGACG Rmet_0668 735666 - 735860 + | rubredoxin-type Fe(Cys)4 protein TERM 499 736059 - 736035 - f 77 -4.1 -4.95547 | overlap 736037 GTGACAAGAATAAAA GGGGCCGCC AGGTCAA GGCGGCTTC CAGCAAGGCAGGTGC Rmet_0669 736238 - 736741 + | response regulator receiver domain-containing protein Rmet_0670 736776 - 737144 + | response regulator receiver domain-containing protein Rmet_0671 737222 - 737764 + | CheW protein TERM 500 737952 - 738005 + G 78 -13 -3.53012 | gap 2, opp_overlap 737939 737982 737983, overlap 737985 ATCGGCCTGGGTCGC CGCACCGCAGCCGCGGGCGCTGCCGC AGAA GTGGCGGCGCC-G-GGTGGCGCCGCG TTTGCGGCGGCCGGC TERM 501 738027 - 737983 - g 70 -14.1 -2.57132 | opp_overlap 737952 737985, overlap 737982 GCGCTGCCGCAGAAG TGGCGGCGCCGGGTGGCGC CGCGTTT GCGGCGGCCGGCGCGGCCA GACAGCAGGGCGGCC TERM 502 737985 - 738004 + G 81 -16.4 -2.71712 | opp_overlap 737983 737982, overlap 737952 GCTGCCGCAGAAGTG GCGGCGCC GGGT GGCGCCGC GTTTGCGGCGGCCGG Rmet_0672 737922 - 740123 + | methyl-accepting chemotaxis sensory transducer Rmet_0673 740156 - 746125 + | CheA signal transduction histidine kinases Rmet_0674 747511 - 746198 - | major facilitator transporter Rmet_0675 748382 - 747621 - | 3-ketoacyl-(acyl-carrier-protein) reductase Rmet_0676 748692 - 748453 - | hypothetical protein Rmet_0677 750121 - 748685 - | aldehyde dehydrogenase TERM 503 748856 - 748828 - G 86 -10.1 -4.25283 | AGTTGTTGATGAAAA CCTGGCCCGCCCG CAG CTTGCGCGCCAGG CGCAACTGCCGACCG Rmet_0678 750286 - 750813 + | inorganic pyrophosphatase TERM 504 750857 - 750842 - T 100 -11.8 -5.08824 | opp_overlap 750842 GCGTTATCGAAAAAA CCCGCC ATCT GGCGGG TTTTTTTGTTGCCGG TERM 505 750842 - 750857 + T 100 -11.8 -5.7946 | opp_overlap 750842 GCGTTATCGAAAAAA CCCGCC ATCT GGCGGG TTTTTTTGTTGCCGG Rmet_0679 752095 - 750893 - | hypothetical protein nadE 752164 - 754314 + | NAD synthetase Rmet_0681 754428 - 754766 + | nitrogen regulatory protein P-II TERM 506 754781 - 754811 + T 100 -16.3 -4.33274 | gap 1, opp_overlap 754788, overlap 754788 ATCGAGATTGAGATG GCAAAAAGGCCGGC AGAT GCCGGCCTTTT-GC TTTTGGTCGTGTCGC TERM 507 754805 - 754788 - T 100 -14.1 -4.64766 | opp_overlap 754788 754781 TTGAGATGGCAAAAA GGCCGGC AGAT GCCGGCC TTTTGCTTTTGGTCG TERM 508 754788 - 754805 + T 100 -14.1 -4.70319 | opp_overlap 754788, overlap 754781 TTGAGATGGCAAAAA GGCCGGC AGAT GCCGGCC TTTTGCTTTTGGTCG Rmet_0682 755483 - 754836 - | hypothetical protein Rmet_0683 756165 - 755491 - | Smr protein/MutS2 TERM 509 756253 - 756222 - R 93 -14.4 -3.75598 | overlap 756211 756226 756242 TAAGGAATCCAATAA GGAATCGGGCCGGT AAAA ACCGGCCCGAATCG GTGACGCTAGTGCCT TERM 510 756249 - 756226 - R 100 -18.2 -3.55973 | overlap 756211 756222 756242 GAATCCAATAAGGAA TCGGGCCGGT AAAA ACCGGCCCGA ATCGGTGACGCTAGT Rmet_0684 757237 - 756284 - | thioredoxin reductase TERM 511 756944 - 756962 + g 79 -10.3 -4.19704 | overlap 756937 GTACTCGCCCGAATC GCCGATC AGGCG GATCGGC TTTTCCGTCAGCTTG Rmet_0685 757419 - 759746 + | DNA translocase FtsK TERM 512 759777 - 759763 - f 78 -4.2 -4.7254 | AGGCGCTATCAAAAA GAAGCG AAG CGGTTC TGGCTAGGCGCGCAA TERM 513 759856 - 759843 - f 71 -9.5 -3.80573 | opp_overlap 759843 GTGAGGAGGATGAAA CGCGC CATG GCGCG TTTCACACGGCTTCG lolA 760008 - 760652 + | outer-membrane lipoprotein carrier protein Rmet_0687 760661 - 761077 + | putative lipoprotein transmembrane TERM 514 761097 - 761053 - T 100 -12.1 -4.7373 | gap 1, opp_overlap 761072 CGATGCCATGAAAAA GCTGACCGAGCG-CGCCAAG GGCTGA CCCGGCGACGCCCCGCCAGC CTTTGGCGCTAGGCC Rmet_0688 761333 - 761106 - | hypothetical protein TERM 515 761164 - 761199 + g 72 -13.3 -3.14132 | gap 1 ATGGCCTGCAGTTGT TCGCGGCGGATGCGGA TCGCC TCCGCGT-CGCCGCGC TTGATCGCCGCGCGC TERM 516 761422 - 761391 - R 100 -17.2 -3.50393 | overlap 761392 TGCCATCGCACATAA TGCGGCGACGCAGC ATCG GCCGCGCCGCCGCG AGCCAGGCGAAGTTC TERM 517 761421 - 761392 - R 95 -20.7 -2.70022 | overlap 761391 GCCATCGCACATAAT GCGGCGACGCAGC ATCG GCCGCGCCGCCGC GAGCCAGGCGAAGTT Rmet_0689 762119 - 761436 - | hypothetical protein Rmet_0690 762386 - 763234 + | extracellular solute-binding protein Rmet_0691 763340 - 764035 + | amino acid ABC transporter permease Rmet_0692 764038 - 764730 + | amino acid ABC transporter permease Rmet_0693 764733 - 765482 + | ABC transporter-related protein Rmet_0694 765597 - 766934 + | recombination factor protein RarA TERM 518 767463 - 767499 + G 90 -16 -3.57144 | gap 1, opp_overlap 767462 767461 767458 767454 ACGAAACCGAGAACG TCGAA-GTGCGCCGCGT GGGC ACGCCGCGCACGTTCGA TTTCGAGATCAAGGA Rmet_0695 767102 - 768409 + | seryl-tRNA synthetase Rmet_0696 768749 - 768492 - | hypothetical protein TERM 519 768623 - 768596 - G 100 -7.7 -5.18726 | overlap 768597 CCGCCATAACAAAAA CCTGCTGACGG ATTCGA CCACCAGCAGA CAAAAACAGCGTAGT TERM 520 768650 - 768674 + g 100 -8.6 -5.42198 | gap 1, opp_overlap 768650 TAGTAAAACTAAGAA CCGACGTTTGC GAAA GCAG-CGTCGG TTTTGTTTTTTCGCC TERM 521 768857 - 768830 - R 73 -9.1 -3.98204 | gap 1, opp_overlap 768830 AAACACACGCACAAA CCGACGCACTGC GAGAA GCGG-GCGTCGG TTTTATTTTTGCCGA TERM 522 768830 - 768857 + r 100 -11.3 -5.26119 | gap 1, opp_overlap 768830 AAACACACGCACAAA CCGACGCACTGC GAGAA GCGG-GCGTCGG TTTTATTTTTGCCGA TERM 523 769182 - 769167 - R 89 -11.8 -4.15396 | opp_overlap 769167 769164 769160 CTCCAAATGAAAGAA GGCGCC CGCA GGCGCC TCGTTCTTTAGCGAT Rmet_0697 769671 - 769207 - | pilus assembly protein major pilin PilA TERM 524 769898 - 769878 - R 93 -11.3 -4.42386 | opp_overlap 769868 769867 CTGGGAGTGACAAAA TTTGTCACA ATT TGTGACAAA GCCTGCGCGCTGCAG TERM 525 769915 - 769899 - R 73 -9.4 -3.88137 | ACAATTTGTGACAAA GCCTGC GCGCT GCAGGC CGCCTTCACTCACCA Rmet_0698 771247 - 769931 - | hypothetical protein TERM 526 770615 - 770645 + g 72 -8.2 -4.1899 | opp_overlap 770635, overlap 770605 CTGGGTCATGATGGC CGTGATCGGTTTCG AAT CGAGTTCGAACACG TTTTCGATCAGATGC Rmet_0699 772283 - 771330 - | LysR family transcriptional regulator TERM 527 773552 - 773587 + G 74 -11 -3.58343 | gap 1, overlap 773553 CCTTGATGCATTGCA GCCGTGGGC-CGGCCTG CGT CCGGCCACGCCCACGGG TTTGCCGATGATCGG TERM 528 773553 - 773586 + G 75 -14.5 -2.74792 | gap 1, overlap 773552 CTTGATGCATTGCAG CCGTGGGC-CGGCCTG CGT CCGGCCACGCCCACGG GTTTGCCGATGATCG Rmet_0700 772476 - 773753 + | D-amino acid dehydrogenase small subunit TERM 529 774321 - 774309 - g 73 -9.1 -3.8917 | overlap 774310 GCTCAAGGACAAGAA CGTGG TGA CCACG GCTGGCACCACCGGC Rmet_0701 773842 - 774750 + | extracellular solute-binding protein Rmet_0702 775405 - 774929 - | hypothetical protein TERM 530 775653 - 775612 - R 76 -14.5 -2.52676 | gap 1, opp_overlap 775604 GAGGGGTGCAAGCCA CGTAGCGACTGATTCGGCCG AAT CGGCGGAATCAGTTGCC-CG CGACGCGCTTTGCGA Rmet_0703 778213 - 775643 - | cyanophycin synthetase Rmet_0704 780901 - 778250 - | cyanophycin synthetase TERM 531 778642 - 778610 - G 71 -10.6 -3.64703 | gap 2, opp_overlap 778623 778631, overlap 778588 GCGCTCGGACGGAAA GCGGTCGA-GCGC-GG CCG CCAGCGCCTCGAGCGC CGGGGCGTTGTGTGC TERM 532 779504 - 779534 + g 71 -12.4 -3.2794 | ATCGACGATGGCACG GCCCACCGGGCGCG GCT CGCCTTCGGCGGGC TTGATATGCATCAGC TERM 533 781075 - 781098 + H 72 -11.6 -3.33509 | opp_overlap 781073 781074 CTTGCGGGCAAAATT GCGGGCCGCC ACAT GGCGCTCCGC TTAAATTGTTTCAAG TERM 534 782371 - 782356 - g 75 -7.5 -4.25104 | opp_overlap 782356, overlap 782367 CTTCGCGCAGGAAAA GCGCG AAGTGA CGCGC TTTCGCGAGGCGAAC Rmet_0705 781145 - 783499 + | ABC transporter-related protein Rmet_0706 783489 - 784004 + | hypothetical protein TERM 535 784036 - 784065 + T 79 -15.1 -2.88849 | opp_overlap 784041, overlap 784041 GCCCGGCACGGCATG AAAAACGGCACGC AATT GCGTGCCGTTTTC GTTTCCTCATCTGAC TERM 536 784060 - 784041 - T 100 -15 -4.7373 | opp_overlap 784036 784041 GCACGGCATGAAAAA CGGCACGC AATT GCGTGCCG TTTTCGTTTCCTCAT TERM 537 784041 - 784060 + T 100 -15 -4.59376 | opp_overlap 784041, overlap 784036 GCACGGCATGAAAAA CGGCACGC AATT GCGTGCCG TTTTCGTTTCCTCAT Rmet_0707 784504 - 784103 - | hypothetical protein Rmet_0708 785016 - 784684 - | hypothetical protein Rmet_0709 785082 - 785417 + | hypothetical protein TERM 538 785468 - 785487 + T 95 -13.6 -4.02719 | opp_overlap 785468 GCAGGCATAAAAAAA CCCAACCG GTGA CGGTTGGG TTTCATGTTTGGTGG TERM 539 785487 - 785468 - T 100 -13.6 -5.64274 | opp_overlap 785468 GCAGGCATAAAAAAA CCCAACCG GTGA CGGTTGGG TTTCATGTTTGGTGG Rmet_0710 786586 - 785930 - | phosphoglycolate phosphatase Rmet_0711 787333 - 786590 - | 3-demethylubiquinone-9 3-methyltransferase TERM 540 787392 - 787409 + r 100 -12.7 -5.52384 | opp_overlap 787392 TTTACCAAAAAAAAA GCCCAGC TTGC GCTGGGC TTTTTTTCATCGGAG TERM 541 787409 - 787392 - R 100 -12.7 -6.15828 | opp_overlap 787392 TTTACCAAAAAAAAA GCCCAGC TTGC GCTGGGC TTTTTTTCATCGGAG Rmet_0712 788087 - 787434 - | OmpA/MotB TERM 542 788578 - 788556 - g 80 -8.4 -4.42464 | overlap 788552 AATTCGCCAAAGAAA CCCTTCCGGT CTC ACTGGAAGAG GAAATGCGCCGCTCA TERM 543 789168 - 789197 + G 71 -10.6 -3.59698 | opp_overlap 789164, overlap 789170 AACTGATCGAATTGG TGCCGGCGCCCG ATTTTC CGACCGCCGGCA TTATCTATGGCATCC Rmet_0713 788534 - 791227 + | DNA gyrase subunit A Rmet_0714 791310 - 791879 + | putative signal peptide protein TERM 544 791992 - 792018 + F 100 -9.5 -4.74706 | gap 1, opp_overlap 791992 GGGTTTGAGGGATAA TGGCTGCTTGGT TCAA ACCG-GCAGCCA TTTTTCCATCTTCCC Rmet_0715 792037 - 793200 + | phosphoserine aminotransferase TERM 545 793218 - 793243 + F 78 -16.1 -2.52464 | opp_overlap 793212 793213, overlap 793200 GCGGTCAAAGCGTCG CGCCGCGCACA GCCA TGCGCGCGGCG TGGCTTCGCCCCAGA TERM 546 793378 - 793349 - g 74 -12.9 -3.25823 | gap 1 GCCCCCGCACAGGAA GCCGGGCGCCAGGA CGC TCCTGG-ACCCAGC GCGCAGGAGCAGGCG Rmet_0716 793301 - 794464 + | prephenate dehydratase / chorismate mutase TERM 547 794674 - 794661 - g 76 -9.5 -4.07568 | CCCGCCTCGGCAAAA GCGGC TATC GCCGC CGCGACGGAGGATCT Rmet_0717 794484 - 795608 + | histidinol-phosphate aminotransferase Rmet_0718 795618 - 796526 + | prephenate dehydrogenase Rmet_0719 796526 - 797884 + | 3-phosphoshikimate 1-carboxyvinyltransferase Rmet_0720 798142 - 797912 - | membrane protein-like protein TERM 548 798173 - 798188 + H 74 -6.8 -4.36914 | GTTTGGGAATTCAGG GCGGTT GCGC GACCGC TTTTGTGGGGGGGGG TERM 549 798882 - 798828 - g 72 -12.7 -3.15544 | gap 1, opp_overlap 798828 798829 CGTGACCTTGAGGAA CGCGACGCGCGGGATCGCACCCGTGC CGCC GCACCGCTGCG-TCCCGCGGAAGGCG CTTATCGTCTCGATA Rmet_0721 798303 - 798962 + | cytidylate kinase rpsA 799106 - 800800 + | 30S ribosomal protein S1 TERM 550 800908 - 800861 - g 81 -7.5 -4.57073 | opp_overlap 800861, overlap 800863 GAGCTCGTCGAAAAA CTGGCTGCCCGCTTTCCGCAG TTGCTG CTGCGGGATGCGGACATCTCG GTGAAAACGATTCTC TERM 551 800970 - 800916 - g 72 -8.5 -4.08394 | gap 1, opp_overlap 800923 800926 800960, overlap 800967 800968 ACATCTCGGTGAAAA CGATTCTCGACGCGATGTCC-GAGGC GCTG GCCGATGGCCATCGCATCGAAATCCG AGGTTTCGGCAGTTT TERM 552 801197 - 801165 - g 71 -7.8 -4.13767 | overlap 801166 CCCCGCACGGCAAAA CCGGGCAATCGC-AGC TTG GCTCGCAATCGCC-GG CGTCGTTGCACGATG ihfB 800834 - 801241 + | integration host factor subunit beta TERM 553 801286 - 801303 + F 100 -10.5 -5.45652 | opp_overlap 801286 GAAGTCTGTTGGAAA GCGCTCC CTCG GGGGCGC TTTTTTGTTGCGCAT Rmet_0724 801470 - 801793 + | putative transmembrane protein Rmet_0725 801797 - 803026 + | hypothetical protein TERM 554 803466 - 803441 - g 74 -14.7 -2.57132 | opp_overlap 803427, overlap 803440 GTGGTGGTGGACAAG TCGACCGTGCC GGTT GGCACGGGCGA TCGCGTCAGCGCCGT Rmet_0726 803084 - 804457 + | UDP-glucose/GDP-mannose dehydrogenase TERM 555 804728 - 804678 - g 75 -10.8 -3.83026 | opp_overlap 804704, overlap 804679 GTGGTGCAGATCAAA CGCAGCGACGAGCGCCTGGGTGGC GCC GCCAACGTGGCGCGCAACGCCGCC GCGCTGGGCGCGAAG TERM 556 804727 - 804679 - g 73 -14.3 -2.89602 | opp_overlap 804704, overlap 804678 TGGTGCAGATCAAAC GCAGCGACGAGCGCCTGGGTGGC GCC GCCAACGTGGCGCGCAACGCCGC CGCGCTGGGCGCGAA Rmet_0727 804537 - 805481 + | D-alpha,beta-D-heptose 7-phosphate 1-kinase TERM 557 805707 - 805671 - g 71 -12.1 -3.22653 | opp_overlap 805677 805691, overlap 805669 ACTACCTGGACAAGA CCGACTTCGTCGCCCGC TTC GCGCGCGGCGATTTCGG CAATGTCCGCGCGGT TERM 558 805677 - 805701 + G 81 -13.5 -3.56643 | opp_overlap 805671 805669, overlap 805691 TGGACAAGACCGACT TCGTCGCCCGC TTC GCGCGCGGCGA TTTCGGCAATGTCCG TERM 559 805927 - 805909 - g 72 -6.6 -4.30576 | CCGTGACTACGAAAA GCCGCTGA ACG TCTACGGC TACTCCAAGTTCCTG Rmet_0728 805508 - 806503 + | ADP-glyceromanno-heptose 6-epimerase precursor TERM 560 806616 - 806587 - f 73 -10.1 -3.59698 | gap 1, opp_overlap 806596 CGATTCGACACACAA TGG-CGCGAAGGTT GTG AACCTTCGTGTCCA GACGCTTCCGACGCC Rmet_0729 806713 - 807093 + | helix-hairpin-helix DNA-binding, class 1 TERM 561 807149 - 807163 + F 74 -11.4 -3.53012 | TATGCGTTGTGCTTG CGGCAC GAG GTGCCG TTTGCACGGCCCGGG Rmet_0730 807191 - 808639 + | uracil-xanthine permease cysM 808717 - 809652 + | cysteine synthase B TERM 562 809704 - 809678 - T 100 -17.3 -4.41348 | gap 1, opp_overlap 809678 TTGCCCTGAAAGAAA GGCCCCGCAGGC TTGC GCC-GCGGGGCC TTTTTCTTTGCTCTT TERM 563 809678 - 809704 + T 100 -17.3 -5.37171 | gap 1, opp_overlap 809678 TTGCCCTGAAAGAAA GGCCCCGCAGGC TTGC GCC-GCGGGGCC TTTTTCTTTGCTCTT Rmet_0732 810958 - 809732 - | lytic murein transglycosylase B TERM 564 810782 - 810760 - G 75 -9.8 -3.97834 | GAAGCCGAGGAGAAA TGCCGCACAG GCC CAATGCGGCA GCGGTGAGTGCGGCG TERM 565 811542 - 811554 + G 74 -4.8 -4.56597 | CGACGACCCGCAGGT GCTG ATGTG CAGC TTTTTCCAGCACCCG Rmet_0733 811003 - 811926 + | histone deacetylase superfamily protein TERM 566 811955 - 811939 - f 81 -4.4 -4.94992 | gap 1, opp_overlap 811939, overlap 811951 811952 TGAAAGTGACAAAAA CGCCGCT TATA AG-GGCG TCTATATGACGCCAG TERM 567 812085 - 812046 - f 93 -8.4 -4.96501 | opp_overlap 812049, overlap 812047 812048 CTTCACAAAAATAAA GTGCGGCAACAACGCAGG AGAC CCCGCGATGTTGCCGTTT TCTTTTTACTTTCCA TERM 568 812084 - 812047 - f 77 -11.9 -3.56816 | opp_overlap 812049, overlap 812046 812048 TTCACAAAAATAAAG TGCGGCAACAACGCAGG AGAC CCCGCGATGTTGCCGTT TTCTTTTTACTTTCC TERM 569 812083 - 812048 - f 79 -15.4 -2.73005 | opp_overlap 812049, overlap 812047 812046 TCACAAAAATAAAGT GCGGCAACAACGCAGG AGAC CCCGCGATGTTGCCGT TTTCTTTTTACTTTC TERM 570 812049 - 812082 + F 100 -16.7 -5.36689 | opp_overlap 812048 812047 812046 CACAAAAATAAAGTG CGGCAACAACGCAGG AGAC CCCGCGATGTTGCCG TTTTCTTTTTACTTT Rmet_0734 812100 - 813134 + | ABC transporter-related protein Rmet_0735 813124 - 813777 + | binding-protein-dependent transport systems inner membrane component TERM 571 813939 - 813924 - g 70 -6.1 -4.25283 | overlap 813933 813934 ATTCGCGCAGGAAAA GCCGA TCAAGG TCGGC GTGACGGGTGGCCCG Rmet_0736 813844 - 814638 + | lipoprotein YaeC TERM 572 814694 - 814662 - f 73 -10.6 -3.64822 | gap 1 AGGTTTTCATCCAAA CTCTGTGCGCGCAGG GCAT CCTGCG-GCACAATG GCGTGAAAATTTTCT TERM 573 814710 - 814735 + F 80 -11.2 -3.71378 | overlap 814713 GCGTGAAAATTTTCT GAGTTGCCGG CTATGC CCGGCAATTC TTTGCCTATAAAATA TERM 574 814713 - 814732 + F 73 -9.3 -3.98913 | overlap 814710 TGAAAATTTTCTGAG TTGCCGG CTATGC CCGGCAA TTCTTTGCCTATAAA Rmet_0737 814797 - 815600 + | electron transfer flavoprotein beta-subunit Rmet_0738 815619 - 816554 + | electron transfer flavoprotein, alpha subunit TERM 575 816622 - 816649 + F 100 -12 -5.00884 | gap 1, opp_overlap 816618 816622 AACAAGAAGAATGAA GCCGTTC-CGGGT ATC GCCCGCGAGCGGC TTTTTTGCAAACGCT Rmet_0739 816675 - 818459 + | acyl-CoA dehydrogenase-like protein TERM 576 818512 - 818491 - T 100 -17.3 -4.45664 | opp_overlap 818491 TCAAGGCAATGAAAA GGGCGACCC CTCG GGGTCGCCC TTTTTTTCGTCACGG TERM 577 818491 - 818512 + T 100 -17.3 -5.52384 | opp_overlap 818491 TCAAGGCAATGAAAA GGGCGACCC CTCG GGGTCGCCC TTTTTTTCGTCACGG Rmet_0740 819842 - 818538 - | D-amino acid dehydrogenase small subunit TERM 578 819212 - 819253 + g 73 -9.4 -3.84246 | gap 1 CGCCGATCGATTCAG CCATGG-CTGCCAGCCGTT CCGTA AACAGCTGGCAGTCCCCGG TTTCATCGTTCGGCA TERM 579 819456 - 819499 + g 71 -13.8 -2.78384 | gap 1 CTGGCGGCCTTCATA GCTGATGCCGGTATCCGCGCG CAG CGCGCGGATACAGTCC-CGGC TGTACTCGGCCAGAC Rmet_0741 819951 - 820460 + | AsnC family transcriptional regulator Rmet_0742 821565 - 820480 - | radical SAM family protein TERM 580 820628 - 820614 - G 76 -5.6 -4.57569 | CCAGCTCGGCAAAAA TGCCCG TCC CGCGCA TCCGGCTCGTGAATG TERM 581 821161 - 821182 + g 81 -13 -3.60631 | CGGATCGGTGTTGGT GCCGAGCG CGATGA CGCTCGGC TTGTAGTGTTTCTTG Rmet_0743 822632 - 821700 - | LysR family transcriptional regulator TERM 582 821980 - 822010 + g 78 -12.7 -3.53012 | gap 2, opp_overlap 821966 ACCTCGCCGTTATCG GCGCG-T-AGCGTGC CCC GCACGCTCACCGCGC TTTCGCCGACCGGGG Rmet_0744 823156 - 822665 - | TM2 TERM 583 822789 - 822775 - G 89 -5 -5.1101 | opp_overlap 822786 822787, overlap 822776 822778 TCATCAGCGAAAAAA TGATCA GGA TGACCA CGGGCCAGCCCGAGC TERM 584 823368 - 823350 - g 81 -11.7 -4.10612 | ACTGACAATGACAAA TGGCCCG CGTGC CGGGCCA GGTCCGAAAAAAGCG Rmet_0745 823326 - 823604 + | hypothetical protein Rmet_0746 824034 - 823621 - | hypothetical protein TERM 585 824114 - 824140 + r 71 -8.9 -3.78351 | gap 1, overlap 824118 824119 TGTGACCGCCTATGC CAATCCCGTTAC CGGT GTAACGG-ATTG TTTCGTCAAATTTGT TERM 586 824170 - 824216 + r 100 -18.8 -3.53444 | TCAGCTTTGGAGCGT CTGCTGCGATGCCGCGCCAG GCCAGCA TTGGCGCGGTATCGAAGCGG TTTCAGGGCGCGTAG Rmet_0747 825352 - 824219 - | putative membrane-bound dehydrogenase oxidoreductase protein Rmet_0748 825450 - 825779 + | SSU ribosomal protein S16P rimM 825838 - 826500 + | 16S rRNA-processing protein trmD 826520 - 827302 + | tRNA (guanine-N(1)-)-methyltransferase TERM 587 827389 - 827375 - f 77 -8.6 -4.42386 | overlap 827387 TGGTTATGGAGAAAA CGATGA ACA TCATCG AGCAAATCGAGAAGG rplS 827377 - 827769 + | 50S ribosomal protein L19 TERM 588 827818 - 827835 + F 100 -11.3 -5.27335 | opp_overlap 827821 GTGCCGGATTGCGAA GGACACC CTCG GGTGTCC TTTTTGTTTGGCGGC Rmet_0752 827862 - 828596 + | NUDIX hydrolase Rmet_0753 829476 - 828628 - | hypothetical protein TERM 589 829633 - 829612 - H 70 -4.4 -4.56597 | opp_overlap 829631 GCGCCTGCGCAAAAA CCCCCA AGTGCGGCGA TGGGGG AGCCGGTACAATGGC TERM 590 831145 - 831118 - g 73 -9.1 -3.89957 | gap 1 GCGAAGAAGGAAGAA CCG-GCGCTGGC CGAAC GCGAGCGCACGG AAGAGGAAGTACGCC dnaE 829627 - 833157 + | DNA polymerase III subunit alpha TERM 591 833180 - 833206 + GT 77 -11.5 -3.59979 | opp_overlap 833167 AAGGCGCTGGCCGCG CAGGGCGAGCG CAAGC CGCGCGTCCTG TTTCACGTCACGCAC TERM 592 834159 - 834203 + GT 74 -12.8 -3.14051 | gap 2, overlap 834157 TGGTCAGCACCGATT GTCCGACGGGGCCG-CG-CGAG ATC CTCGACGATGGCCGCGCCGGGC TGTTGGTGCCGGTGG Rmet_0756 835127 - 834345 - | glycosyl transferase family protein Rmet_0755 833150 - 834412 + | glycosyl transferase, group 1 TERM 593 834905 - 834933 + gF 100 -5.9 -5.60993 | overlap 834895 834906 CGATGGAGAGTACCC ACTCGCTTTGTGC CTT GGACAGGGCGAGG TTTTTTTGTGGACCG TERM 594 834906 - 834932 + gF 75 -9.4 -3.95873 | overlap 834895 834905 GATGGAGAGTACCCA CTCGCTTTGTGC CTT GGACAGGGCGAG GTTTTTTTGTGGACC TERM 595 835067 - 835095 + gF 87 -7.4 -4.77438 | ACCAGGAGACGCTCT CGAGGCACTC CCGGATATT GTGTGCCTCG TTTTTAGTGATCAGT Rmet_0757 835206 - 836990 + | Lipid A export ATP-binding/permease protein MsbA Rmet_0758 837075 - 837659 + | hypothetical protein Rmet_0759 838200 - 837682 - | putative lipoprotein TERM 596 838178 - 838164 - G 100 -10 -5.60993 | opp_overlap 838165, overlap 838166 CGGCGCACAAAAAAA CAGCCA GCA TGGCTG GCATTGCATTTCTTA TERM 597 838180 - 838166 - G 90 -11.4 -4.45201 | opp_overlap 838165, overlap 838164 GCGCACAAAAAAACA GCCAGC ATG GCTGGC ATTGCATTTCTTAAC Rmet_0760 839662 - 838436 - | amidohydrolase 3 TERM 598 838829 - 838871 + g 76 -14 -3.14564 | CGGCGCGCCGAGGAT CGTCGGGAGCGCGTGGGCCG AGG CGGCCTGCGCCGTCTCCACG TTGATCGGAAACTCG Rmet_0761 840380 - 839655 - | phosphonate C-P lyase system, PhnL TERM 599 839955 - 839993 + g 80 -14.5 -3.14344 | gap 1, overlap 839951 CCGTTCGAGCAGCGT CGCGGCG-CGGGCGCGGG CTTC CTCGTGGCTGGCGCCGCG TTGCTGCAGCGGATC phnK 841159 - 840383 - | phosphonates transport ATP-binding protein Rmet_0763 842043 - 841156 - | phosphonate metabolism PhnJ Rmet_0764 843161 - 842040 - | phosphonate metabolism phnH 843780 - 843163 - | carbon-phosphorus lyase complex subunit Rmet_0766 844270 - 843782 - | phosphonate metabolism PhnG Rmet_0767 844433 - 845188 + | GntR family transcriptional regulator TERM 600 845189 - 845233 + F 89 -17.3 -3.26471 | gap 1, opp_overlap 845191 845194, overlap 845191 845192 TCCGATCAGGATTGA AATG-ACGCATCACCCCGCG GTTGCA CGCGGGGTGATGCGTACGTA TTGGTCTAGACATCC TERM 601 845229 - 845191 - f 100 -19.8 -3.69323 | gap 1, opp_overlap 845189 845191 845192, overlap 845194 CGATCAGGATTGAAA TGACGCATCACCCCGCG GTTGCA CGCGGGGTGATGCGT-A CGTATTGGTCTAGAC TERM 602 845191 - 845231 + F 95 -19.9 -3.1978 | gap 1, opp_overlap 845191 845194, overlap 845189 845192 CGATCAGGATTGAAA TG-ACGCATCACCCCGCG GTTGCA CGCGGGGTGATGCGTACG TATTGGTCTAGACAT TERM 603 845192 - 845230 + F 100 -21.2 -2.51547 | gap 1, opp_overlap 845191 845194, overlap 845191 845189 GATCAGGATTGAAAT G-ACGCATCACCCCGCG GTTGCA CGCGGGGTGATGCGTAC GTATTGGTCTAGACA TERM 604 845227 - 845194 - f 100 -24 -2.95116 | opp_overlap 845192 845191 845189, overlap 845191 TCAGGATTGAAATGA CGCATCACCCCGCG GTTGCA CGCGGGGTGATGCG TACGTATTGGTCTAG Rmet_0768 845281 - 846504 + | amidohydrolase 3 Rmet_0769 846501 - 847235 + | hypothetical protein Rmet_0770 847232 - 847819 + | phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN Rmet_0771 848439 - 847972 - | GCN5-related N-acetyltransferase Rmet_0772 848975 - 848436 - | hypothetical protein Rmet_0773 849850 - 848972 - | phosphonate ABC transporter permease TERM 605 849858 - 849819 - G 72 -8.8 -4.19506 | gap 3, opp_overlap 849853, overlap 849825 AGCTGAAGCGGAAAA TGCAAAGCCGATGGCGACC CGAGT GG-CGCCATCGGCTT--CA GGCGAGGCTTACTGC TERM 606 849854 - 849825 - G 93 -15.8 -3.93061 | gap 1, opp_overlap 849853, overlap 849819 AGCGGAAAATGCAAA GCCGATGGCGACC CGAGT GG-CGCCATCGGC TTCAGGCGAGGCTTA Rmet_0774 850847 - 849867 - | phosphonate-binding periplasmic protein Rmet_0775 851897 - 850968 - | phosphonate ABC transporter ATP-binding TERM 607 851879 - 851896 + g 70 -11.3 -3.35798 | opp_overlap 851876 851879 ACAGTGACAGAACGA TGACGCC GGTC GGCGTCA TTCTCAATGGCCGAT Rmet_0776 852103 - 853446 + | major facilitator transporter TERM 608 853506 - 853561 + G 79 -14.8 -2.95073 | overlap 853506 GAAGCGGGCCCCAGG CGCCCCAGCGTCGGC-AGCATGGCGG CACTGA CCGCTG-GCTTGTCGATGCTGGGGCA GTTTGCTATTGCGAC TERM 609 853506 - 853562 + G 91 -14.6 -3.92324 | gap 3, overlap 853506 GAAGCGGGCCCCAGG C-GCCCCAGCGTCGGC-AGCATGGCGG CACTGA CCGCTG-GCTTGTCGATGCTGGGGCAG TTTGCTATTGCGACG Rmet_0777 853446 - 854702 + | Bcr/CflA subfamily drug resistance transporter Rmet_0778 856221 - 854689 - | RNAse G TERM 610 854777 - 854789 + g 81 -9.1 -4.24342 | overlap 854772 AAGTCCCCGAGCATC GCCAG ATG CTGGC TTTCTTCCTCGAGGA TERM 611 854950 - 854993 + g 74 -14.6 -2.62184 | gap 1, opp_overlap 854961 854963 GCAGACCGGGCACTG CTCGCACAGCACATGCGCGAG CGA TTCGCGCGTGCGCT-TGCGCG TCATCTCCACCAGAC TERM 612 855037 - 855064 + g 80 -14.8 -3.17075 | GCCGTTGACCGTGAT GCGCGTGCGGTC GCGT GACAGCGCGCGC TTCAGTTCGGAGAGC TERM 613 855312 - 855325 + g 83 -9.5 -4.35524 | ACTTCAGGTCTACCC GGCGC GACA GCGCC TTTTCGATTTCCGCG TERM 614 856201 - 856219 + g 71 -13.8 -2.72144 | overlap 856200 GCGCTTGTTGTTGTG GCCCGGCT CGT GGCCGGGC ATTTGACCCCAGTGG Rmet_0779 856882 - 856280 - | Maf-like protein TERM 615 856590 - 856564 - G 72 -11.6 -3.53012 | gap 1 GGGTGGTGCCGGAAA GCGACGCCAGC ATGGCA GC-GGCGTCGC GCGCGTCGGCGGGCT Rmet_0780 857478 - 856999 - | SPOUT methyltransferase superfamily protein Rmet_0781 858283 - 857513 - | Iojap-related protein Rmet_0782 859012 - 858305 - | nicotinic acid mononucleotide adenylyltransferase Rmet_0783 859928 - 859017 - | coproporphyrinogen III oxidase Rmet_0784 861331 - 860063 - | phosphoribosylamine--glycine ligase TERM 616 861393 - 861365 - R 95 -12.4 -4.15854 | gap 1 AAACGCATGCGAAAA GCGGCAG-CTGGC TGGT GCCGGGCTGCCGC CATGGGGCGCGGCGC Rmet_0785 862141 - 861416 - | hypothetical protein TERM 617 862076 - 862099 + g 76 -6 -4.53047 | gap 1 GCGCGTCCAGACCTT GCCG-CGCT TGGCGTC AGCGGCGGC TTTCTTGTGTTTGAT Rmet_0786 862397 - 863932 + | protein of unknown function DUF853, NPT hydrolase putative TERM 618 863970 - 863992 + T 80 -11.2 -3.73953 | opp_overlap 863972, overlap 863972 GATGCATCAAAATAA AACGCCCGCG CGA TGCGGGCGTC TTTCATGGGGATCGT TERM 619 863990 - 863972 - T 100 -13.1 -5.13722 | opp_overlap 863970 863972 TGCATCAAAATAAAA CGCCCGC GCGAT GCGGGCG TCTTTCATGGGGATC TERM 620 863972 - 863990 + T 86 -13.8 -3.45324 | opp_overlap 863972, overlap 863970 TGCATCAAAATAAAA CGCCCGCG CGA TGCGGGCG TCTTTCATGGGGATC Rmet_0787 864199 - 864047 - | hypothetical protein TERM 621 864316 - 864290 - R 85 -6.5 -4.85599 | opp_overlap 864292, overlap 864291 864292 GTCATCCCACAAAAA CTTTGAGGCGC ATCAA GCGCCTCAATT TCATTCAGACGAATC TERM 622 864315 - 864291 - R 70 -10 -3.50877 | opp_overlap 864292, overlap 864290 864292 TCATCCCACAAAAAC TTTGAGGCGC ATCAA GCGCCTCAAT TTCATTCAGACGAAT TERM 623 864292 - 864314 + r 91 -13.5 -3.90112 | opp_overlap 864291 864290 864292 CATCCCACAAAAACT TTGAGGCGC ATCAA GCGCCTCAA TTTCATTCAGACGAA TERM 624 864314 - 864292 - R 73 -13.5 -2.70044 | opp_overlap 864292, overlap 864291 864290 CATCCCACAAAAACT TTGAGGCGC ATCAA GCGCCTCAA TTTCATTCAGACGAA upp 864997 - 864347 - | uracil phosphoribosyltransferase Rmet_0789 865571 - 865089 - | hypothetical protein TERM 625 866100 - 866151 + G 81 -14.4 -3.48276 | gap 1, overlap 866108 GGTATCTCCAGTTTC TTGTT-GTTCCTGCGCGGCGCGC GGCTTTG GCGCGCCGCGCAGGCGCCGGCCA TTGTATGGGAAAGCA Rmet_0790 865611 - 867209 + | hypothetical protein Rmet_0791 867319 - 868035 + | short-chain dehydrogenase/reductase SDR mgsA 868037 - 868459 + | methylglyoxal synthase TERM 626 868476 - 868518 + T 88 -13.5 -3.57144 | gap 2, opp_overlap 868475 868478, overlap 868480 GAAGTACGGTAGAAG TACGGCAGTCAGCGCGACCGC ACG GTGGTCGCGCTGGC-G-CGCA TTTCAGCCTGGCGCA TERM 627 868480 - 868517 + T 79 -16.3 -2.74144 | gap 1, opp_overlap 868478 868475, overlap 868476 TACGGTAGAAGTACG GC-AGTCAGCGCGACCGC ACG GTGGTCGCGCTGGCGCGC ATTTCAGCCTGGCGC Rmet_0793 868777 - 868484 - | hypothetical protein Rmet_0794 870052 - 868910 - | basic membrane lipoprotein TERM 628 869919 - 869971 + g 72 -11.2 -3.53444 | opp_overlap 869897, overlap 869897 869920 869936 TTCAGCGGCTCGGCA GCCGCAGCGGCCGG-CGCAGATGCCG GGG CGGCGGTTTCGGCCGGCTTCT-CGGC TTCCTTCTTGCCGCA Rmet_0795 871053 - 870133 - | inner-membrane translocator TERM 629 870880 - 870868 - G 73 -9.1 -3.85698 | GGCGCCCGCGACAAA GCCGA GCA TCGGC GACTGGGTCTGGTAG Rmet_0796 872166 - 871072 - | inner-membrane translocator Rmet_0797 873772 - 872159 - | ABC transporter-related protein TERM 630 872867 - 872851 - G 72 -11.5 -3.54424 | GGCCATTGCCGGAAA CGCCGGC GAT GCCGACG ATCTCGCCCGCATGG TERM 631 874003 - 873967 - R 100 -33.1 -5.27938 | overlap 873988 AGTGGCAAAGAAAAA CCGCCGCTGGGCCGGGG AAA CCCCGACCCAGCGGCGG CTGGGTGCACGTCGG Rmet_0798 874973 - 874050 - | Pirin-like protein TERM 632 875573 - 875588 + H 77 -7.6 -4.4078 | ATTTCGGAAGTGGCG GCGAAA TCTC TTTCGC TTTTCGTTCCGGAAG Rmet_0799 875618 - 876334 + | binding-protein-dependent transport systems inner membrane component TERM 633 877026 - 877013 - g 70 -8.1 -3.9461 | opp_overlap 877013 GGCGCTGAAGAATAA CCAGG TGGA CCTGG GCCTGGTCTATACGA Rmet_0800 876345 - 877295 + | substrate-binding region of ABC-type glycine betaine transport system Rmet_0801 877306 - 877956 + | binding-protein-dependent transport systems inner membrane component Rmet_0802 877953 - 879149 + | glycine betaine/L-proline transport ATP binding subunit Rmet_0803 879817 - 879371 - | hypothetical protein TERM 634 879865 - 879844 - R 76 -10.1 -3.75437 | AATGAGTGGAGGAAA CCGTCAGCA AAGG TGCAGACGG CGAGGCCGATGCTAG Rmet_0804 880727 - 879972 - | SPFH domain-containing protein/band 7 family protein Rmet_0805 882239 - 880764 - | hypothetical protein TERM 635 881282 - 881246 - G 75 -14.5 -2.74701 | gap 1, overlap 881243 ACAGGCCCAACAGCA GGCA-GATCGCGCCGG CAATGC CCGGCACGACCATGCC CGGCGTGGAGAACTC Rmet_0806 882347 - 883618 + | hypothetical protein TERM 636 883727 - 883745 + G 74 -11.6 -3.57144 | TCGCCTTGCAGCCCG GCCGTGCC GCG GGCCCGGC TTTCCCGATCAGCGA Rmet_0807 883705 - 884478 + | hypothetical protein Rmet_0808 884498 - 884686 + | 4-oxalocrotonate tautomerase TERM 637 885349 - 885366 + G 70 -2.6 -4.63218 | opp_overlap 885342 885341, overlap 885342 885341 885339 CCAAGAATGGCTTGC CCGTGG GGGAGG CCGTGG TTTTCTTCGACCGCA TERM 638 885611 - 885645 + G 78 -14.3 -3.23447 | gap 2, overlap 885609 TGCCGAGCTGCCGTT GCCGGCCATCGAGGCGC TGC GCGCC-CGG-GGCTGGC TGTTCTACACCTTCA Rmet_0809 884706 - 885758 + | L-threonine aldolase Rmet_0810 885826 - 886422 + | NUDIX hydrolase Rmet_0811 886435 - 886662 + | SirA-like protein TERM 639 886680 - 886726 + T 93 -16.9 -3.35679 | gap 1, opp_overlap 886694, overlap 886681 886694 CCCGGTTGTGCTTTA TGCG-CAATAAAAAACGGACGC CAAG GCGTCCGTTTTTTATTGGCGGG TTCTGGCTCAGACCG TERM 640 886681 - 886725 + T 85 -18.2 -2.61264 | gap 1, opp_overlap 886694, overlap 886680 886694 CCGGTTGTGCTTTAT GCG-CAATAAAAAACGGACGC CAAG GCGTCCGTTTTTTATTGGCGG GTTCTGGCTCAGACC TERM 641 886694 - 886711 + T 100 -12.7 -5.4505 | opp_overlap 886694, overlap 886681 886680 ATGCGCAATAAAAAA CGGACGC CAAG GCGTCCG TTTTTTATTGGCGGG TERM 642 886711 - 886694 - T 100 -12.7 -5.45652 | opp_overlap 886681 886680 886694 ATGCGCAATAAAAAA CGGACGC CAAG GCGTCCG TTTTTTATTGGCGGG Rmet_0812 887081 - 886734 - | peptidylprolyl isomerase, FKBP-type Rmet_0813 887660 - 887112 - | YaeQ Rmet_0814 888101 - 887793 - | hypothetical protein Rmet_0815 888822 - 888229 - | YceI Rmet_0816 889245 - 888862 - | putative transmembrane protein TERM 643 889339 - 889301 - R 95 -19.6 -3.31322 | opp_overlap 889301 GCTAATCTGTGACAA GTTGACGAGGCGACGGCA TTG TGCCGTCGCCCCGTGATC GCACTGCCTGGCGTT Rmet_0817 889584 - 889354 - | hypothetical protein Rmet_0818 891335 - 889587 - | glutaminyl-tRNA synthetase TERM 644 891459 - 891471 + H 73 -4.7 -4.60487 | overlap 891455 CTGCGGGGTAACCCG GCACC TGC GGGGC TTTTTCCGAATCGTC Rmet_0819 891615 - 893066 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_0820 893680 - 893063 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Rmet_0821 894611 - 893694 - | phenazine biosynthesis PhzC/PhzF protein TERM 645 894827 - 894798 - R 100 -17.9 -4.41047 | overlap 894800 ATCCCGGAATGAAAA TAGGCGCCATGGG TTTC CCCATGGCGCCTC GCAGGACTTCTACTA TERM 646 894825 - 894800 - R 100 -20.5 -3.8125 | overlap 894798 CCCGGAATGAAAATA GGCGCCATGGG TTTC CCCATGGCGCC TCGCAGGACTTCTAC Rmet_0822 896503 - 894878 - | gamma-glutamyltransferase 2 TERM 647 895011 - 895041 + g 82 -15.4 -3.06492 | TCCACGGATTTGAGC TTGTGGCCGCGCTC CTT GAGCCCGGCCACGG TGTTCGGGTCCATGG Rmet_0823 897559 - 896582 - | hypothetical protein TERM 648 897695 - 897651 - H 74 -13 -3.22878 | overlap 897649 897652 TAATGAAAGTTAATA TTCCTTGCCTGATCCACAAG AAAAA CTTGTGAATCGAGCAAGGAG GCCAGCGACCCATAT TERM 649 897694 - 897652 - H 78 -16.5 -2.53004 | overlap 897651 897649 AATGAAAGTTAATAT TCCTTGCCTGATCCACAAG AAAAA CTTGTGAATCGAGCAAGGA GGCCAGCGACCCATA Rmet_0824 897729 - 898613 + | LysR family transcriptional regulator TERM 650 898669 - 898688 + T 79 -12.1 -3.51232 | opp_overlap 898669, overlap 898665 GCCGGAATGAAAAAA GGGCGCC GCAATG GGCGCCC TTCCTTTACAGCGGA TERM 651 898688 - 898669 - T 100 -12.1 -5.26875 | opp_overlap 898669 898665 GCCGGAATGAAAAAA GGGCGCC GCAATG GGCGCCC TTCCTTTACAGCGGA Rmet_0825 900223 - 898721 - | hypothetical protein TERM 652 899522 - 899542 + g 71 -9.7 -3.71672 | overlap 899513 899512 CAGGTTCGTCACGCT GTCCGTGAA GGT TTCGCGGGC TTCCTTTTGCTCCAG TERM 653 900267 - 900253 - R 71 -9.2 -3.72893 | opp_overlap 900263 TAGCTTGCCAGGAAA GCCGGC CAC ACCGGC ATCTGCAGGTTGATG Rmet_0826 900698 - 900237 - | hypothetical protein TERM 654 901975 - 901990 + G 72 -8.2 -4.1337 | GGACATCGCGCTGCC CGCCGC GGCC GTGGCG TTGTTTCTGATGTGC Rmet_0827 901073 - 902890 + | sodium/hydrogen exchanger Rmet_0828 903869 - 902862 - | hypothetical protein TERM 655 903273 - 903291 + g 70 -11.6 -3.30771 | opp_overlap 903266 CGACAGCACCGACAT CTGCGCGG GCG CCGCGCCG TTGTACGGGATATGG Rmet_0829 904422 - 903967 - | putative transmembrane protein Rmet_0830 905744 - 904524 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 656 907125 - 907100 - g 70 -6.1 -4.26079 | gap 1 CGAAACCATCGAAAA CGGC-ATGTCGA TCC TCGACGCCGCCG TGGCGGACCTGAAGG TERM 657 907273 - 907257 - g 76 -13.7 -3.1505 | ATCACGGTGGACGAA GCGGCGT TCG ACGCCGC GATGACCCGCCAGCG alaS 905964 - 908618 + | alanyl-tRNA synthetase TERM 658 908669 - 908635 - T 91 -19.4 -3.14132 | opp_overlap 908642, overlap 908638 908642 CCCCGTCGGCATCAA TGAGAAAGGCCTCCCG TAA CGGAAGGCCTTTCTCG AGAAATAAAAAACGG TERM 659 908666 - 908638 - T 88 -19.7 -2.77899 | opp_overlap 908642, overlap 908635 908642 CGTCGGCATCAATGA GAAAGGCCTCCCG TAA CGGAAGGCCTTTC TCGAGAAATAAAAAA TERM 660 908662 - 908642 - T 95 -14.7 -4.08144 | opp_overlap 908642, overlap 908638 908635 GGCATCAATGAGAAA GGCCTCCCG TAA CGGAAGGCC TTTCTCGAGAAATAA TERM 661 908642 - 908662 + T 86 -12.5 -3.86346 | opp_overlap 908642 908638 908635 GGCATCAATGAGAAA GGCCTCCCG TAA CGGAAGGCC TTTCTCGAGAAATAA TERM 662 908699 - 908682 - T 100 -12.7 -5.72622 | opp_overlap 908682 TCGAGAAATAAAAAA CGGCTGC GTGA GCAGCCG TTTTTTATTGCGAAG TERM 663 908682 - 908699 + T 100 -12.7 -5.4505 | opp_overlap 908682 TCGAGAAATAAAAAA CGGCTGC GTGA GCAGCCG TTTTTTATTGCGAAG Rmet_0832 910300 - 908723 - | aldehyde dehydrogenase TERM 664 909811 - 909771 - G 84 -14.6 -3.35015 | overlap 909772 GCAACCACCGGACAA CCGGCGGCCAGCGCGGAC GCCGT GTCGCCGCCGGCCACCGA GAACGCCAGCGGGAA TERM 665 909810 - 909772 - G 77 -15.9 -2.60688 | overlap 909771 CAACCACCGGACAAC CGGCGGCCAGCGCGGAC GCCGT GTCGCCGCCGGCCACCG AGAACGCCAGCGGGA TERM 666 909987 - 910026 + g 71 -10.1 -3.57144 | gap 3, overlap 910007 AATTGGCCGGTGGTT CGGC-C-G-CGCTCGCCC TGGAGGC GGGCGAGCGGCAGCGCCG TTTCGGCGTGCGCGC Rmet_0833 911284 - 910466 - | GntR family transcriptional regulator Rmet_0834 911378 - 912733 + | D-glucarate dehydratase Rmet_0835 912828 - 913883 + | hypothetical protein TERM 667 913960 - 913980 + F 100 -15.4 -4.98531 | TCCATGGAAGTGCTT GCCCCGCC TTGAT GGCGGGGC TTTTTGCTTTCAGGC Rmet_0836 914095 - 914688 + | hypothetical protein TERM 668 915051 - 915077 + F 83 -16.6 -2.53876 | opp_overlap 915048 TTCCCGCAATGAGGT GGCCGCGATCGA AGC TGGATCGCGGCC TGACTTCGACTGGCG Rmet_0837 915139 - 917418 + | TonB-dependent siderophore receptor Rmet_0838 917498 - 918184 + | putative hydroxylase Rmet_0839 918190 - 919275 + | FMN-dependent alpha-hydroxy acid dehydrogenase Rmet_0840 920093 - 919278 - | IclR family transcriptional regulator TERM 669 920065 - 920077 + g 74 -2.6 -4.75472 | TCTGTCTCTCCCTCG CTCG TACTC CGGG TTTTCTTGGTGTCCA TERM 670 920260 - 920235 - g 86 -15.5 -3.29591 | gap 1, overlap 920230 920238 ACCATCGAAATCGAA CAG-CGCGACGC CGT GCGTCGCGTCTG GCTGGCGCGCGAAAG TERM 671 920256 - 920238 - g 77 -16 -2.52156 | overlap 920235 920230 ATCGAAATCGAACAG CGCGACGC CGT GCGTCGCG TCTGGCTGGCGCGCG Rmet_0841 920208 - 921026 + | enoyl-CoA hydratase TERM 672 922408 - 922464 + G 100 -23 -2.52543 | opp_overlap 922408 CGCGCCCGCAAGGCA TGGCGCGTGCTGGCG-CAGCCCGGCGCG TCA CGCGCCGGTTCGACGCCAGC-CGCGGCA TCGCTTCCCGGGAAT TERM 673 922464 - 922408 - g 100 -23 -2.52464 | opp_overlap 922408 CGCGCCCGCAAGGCA TGGCGCGTGCTGGCG-CAGCCCGGCGCG TCA CGCGCCGGTTCGACGCCAGC-CGCGGCA TCGCTTCCCGGGAAT Rmet_0842 921028 - 923130 + | CoA-binding Rmet_0843 923190 - 924161 + | hypothetical protein TERM 674 924776 - 924792 + G 70 -8 -4.0371 | CAGCCGCGCGGCAGA CCTCGT GCTCG ACGAGG TTTATCTGCCGGATG Rmet_0844 924165 - 925373 + | acyl-CoA dehydrogenase-like protein Rmet_0845 925373 - 926569 + | acyl-CoA dehydrogenase-like protein Rmet_0846 926969 - 927226 + | hypothetical protein TERM 675 927351 - 927370 + T 100 -15 -4.65153 | TGATGTTGCCTTCAG CGGGTGCC ATGT GGCACCCG TTTTCGTTTGTGTGG Rmet_0847 928363 - 927473 - | hypothetical protein Rmet_0848 929795 - 928872 - | hypothetical protein Rmet_0849 930160 - 930678 + | 17 kDa surface antigen TERM 676 930742 - 930710 - T 100 -16.4 -4.13728 | opp_overlap 930715, overlap 930715 GATACATCGGCAAAA GAAAACGCCACGCG GCAAT CGCGTGGCGTTTTT CATTCTGGCTCGACG TERM 677 930715 - 930737 + T 100 -17 -4.93968 | opp_overlap 930710 930715 ATCGGCAAAAGAAAA CGCCACGCGG CAA TCGCGTGGCG TTTTTCATTCTGGCT TERM 678 930737 - 930715 - T 100 -16.3 -5.08255 | opp_overlap 930715, overlap 930710 ATCGGCAAAAGAAAA CGCCACGCG GCAAT CGCGTGGCG TTTTTCATTCTGGCT Rmet_0850 932046 - 930787 - | coproporphyrinogen III oxidase Rmet_0851 932657 - 932043 - | putative deoxyribonucleotide triphosphate pyrophosphatase rph 933392 - 932676 - | ribonuclease PH Rmet_0853 934388 - 933474 - | protein serine/threonine phosphatases TERM 679 934350 - 934363 + g 71 -9.5 -3.78775 | overlap 934358 CTGGTTGATACGGCG GCCGC CCTT GCGGC TTTCCTGATAGACGG Rmet_0854 935491 - 934430 - | serine/threonine protein kinase TERM 680 935654 - 935672 + H 85 -7.3 -4.8143 | TTTCGGGGAGCCGGT CGCCGCG CCTTA CCCGGCG TTTTTCGATTATTCG TERM 681 935677 - 935688 + H 83 -4.4 -5.01732 | CTTACCCGGCGTTTT TCGA TTAT TCGA TTTTTTCGCGAGATT Rmet_0855 935711 - 936646 + | hypothetical protein gmk 936651 - 937301 + | guanylate kinase TERM 682 937339 - 937303 - f 93 -14.4 -3.794 | gap 1, opp_overlap 937310, overlap 937304 937306 TCGGAATTCACTAAA GCAGGCGCGCGGCCGGA AGGT TCCGGCCGCGTG-CTGT AAAATACTGGCCTGT TERM 683 937338 - 937304 - f 86 -17.9 -2.87319 | gap 1, opp_overlap 937310, overlap 937303 937306 CGGAATTCACTAAAG CAGGCGCGCGGCCGGA AGGT TCCGGCCGCGTG-CTG TAAAATACTGGCCTG TERM 684 937337 - 937306 - f 87 -17.2 -2.98381 | opp_overlap 937310, overlap 937304 937303 GAATTCACTAAAGCA GGCGCGCGGCCGGA AGGT TCCGGCCGCGTGCT GTAAAATACTGGCCT TERM 685 937310 - 937333 + F 88 -19.6 -2.63913 | opp_overlap 937306 937304 937303 TCACTAAAGCAGGCG CGCGGCCGGA AGGT TCCGGCCGCG TGCTGTAAAATACTG Rmet_0857 937386 - 937589 + | DNA-directed RNA polymerase subunit omega TERM 686 939321 - 939353 + G 71 -7.5 -4.18197 | GCCGAAGGGGCATAT TCGGGCGCTGCCCCG CGG CGCGACGGCACTCGA TTTTGCCTACGCGGT TERM 687 940119 - 940065 - g 72 -12.9 -3.14564 | gap 1 CGACGTTTCGATCAA GATCATGGTCCGCAACGTCAAGGG TATCGTGG CCCGCGTCGCTGCGGACC-TGACC TCCGCGGATGCCAAC Rmet_0858 937675 - 940299 + | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA greB 940856 - 940296 - | transcription elongation factor GreB TERM 688 941065 - 941102 + H 90 -14.3 -3.60792 | opp_overlap 941068 941073, overlap 941066 941073 CCGCGCCAACCTATA CGAGAAAAGGGCTTCCA GAAA TGGAGGCCCTTTTTTCA TTTGCGCATTCGACG TERM 689 941066 - 941101 + H 86 -17.8 -2.76261 | opp_overlap 941068 941073, overlap 941065 941073 CGCGCCAACCTATAC GAGAAAAGGGCTTCCA GAAA TGGAGGCCCTTTTTTC ATTTGCGCATTCGAC TERM 690 941094 - 941073 - H 89 -10.1 -4.51378 | opp_overlap 941066 941065 941073, overlap 941068 ACCTATACGAGAAAA GGGCTTCCA GAAA TGGAGGCCC TTTTTTCATTTGCGC TERM 691 941073 - 941094 + H 100 -12.3 -5.37593 | opp_overlap 941073 941068, overlap 941066 941065 ACCTATACGAGAAAA GGGCTTCCA GAAA TGGAGGCCC TTTTTTCATTTGCGC Rmet_0860 941174 - 941521 + | hypothetical protein TERM 692 941591 - 941602 + F 72 -3 -4.8622 | GAATCCGGCATCGTT TGAT CGCG ATCA TTTTTGCTTCCGGGG Rmet_0861 941685 - 941924 + | hypothetical protein TERM 693 942193 - 942211 + T 85 -6.7 -4.7254 | gap 1, overlap 942206 ACGAATTGAAGTTGA GTG-CGCG TAAG CGCGGCAC TTTTTCATGCGCCGT Rmet_0862 942547 - 942287 - | hypothetical protein Rmet_0863 942888 - 942598 - | hypothetical protein Rmet_0864 943049 - 944545 + | hypothetical protein Rmet_0865 944572 - 944883 + | hypothetical protein Rmet_0866 945002 - 945904 + | aspartyl/asparaginyl beta-hydroxylase TERM 694 945958 - 945932 - T 81 -13.8 -3.32354 | opp_overlap 945938, overlap 945938 GCCGCAAACGAAAAT GAAAAAGCCGGC TTA GCCGGCTTTTTT CGTACTCAGTCGTTC TERM 695 945952 - 945938 - T 100 -12.8 -5.13016 | opp_overlap 945938, overlap 945932 AACGAAAATGAAAAA GCCGGC TTA GCCGGC TTTTTTCGTACTCAG TERM 696 945938 - 945952 + T 100 -12.8 -5.1861 | opp_overlap 945938 945932 AACGAAAATGAAAAA GCCGGC TTA GCCGGC TTTTTTCGTACTCAG Rmet_0867 947442 - 945964 - | diguanylate cyclase TERM 697 946611 - 946621 + g 72 -6.8 -4.25104 | TGATGACTTCGCGTT GCTG CCA CAGC TTTTCATGCCAGAGG Rmet_0868 949377 - 947557 - | GntR family transcriptional regulator TERM 698 949296 - 949324 + g 76 -5.8 -4.57073 | overlap 949303 CCGGACCCGTTTCCC GCACCATCCGGC TGGCT GCCGGCCAGTGC TTTTTCGAGCACCTG TERM 699 950871 - 950834 - g 72 -13.4 -3.06261 | gap 1 GCGCAAGTGGGAAGA GCGCGCGTTCG-CGCTG GGCGG CAGCGACTATCGCGCGC CGGGGCAACTGGTTG Rmet_0869 949638 - 951257 + | FAD dependent oxidoreductase Rmet_0870 951254 - 951847 + | hypothetical protein Rmet_0871 952753 - 951896 - | hypothetical protein TERM 700 953887 - 953864 - g 72 -13.1 -3.09834 | opp_overlap 953862 CAGGGGACGATCGAA GCCGCCAGC GTGCAG GCCGGCGGC GATGTGATCGTCAAG Rmet_0872 952943 - 954568 + | hypothetical protein TERM 701 954571 - 954588 + F 71 -8.3 -4.08557 | opp_overlap 954569 CGCCGTGAACTGACG CGGGTGG CGCA CCTCCCG TTCTTGTTTCCAAAC Rmet_0873 954807 - 955220 + | response regulator receiver domain-containing protein TERM 702 955679 - 955644 - f 100 -19.2 -3.59979 | opp_overlap 955651, overlap 955651 TCTGTCGACTGCAAA GCAAAAAGGGCAACCC GTGA GGGTTGCCCTTTCTAC TTTCAAGTGGTGCCG TERM 703 955651 - 955672 + F 100 -15.9 -4.14056 | opp_overlap 955644 955651 ACTGCAAAGCAAAAA GGGCAACCC GTGA GGGTTGCCC TTTCTACTTTCAAGT TERM 704 955672 - 955651 - f 100 -15.9 -4.99134 | opp_overlap 955651, overlap 955644 ACTGCAAAGCAAAAA GGGCAACCC GTGA GGGTTGCCC TTTCTACTTTCAAGT TERM 705 956019 - 956007 - g 85 -4.7 -5.00616 | opp_overlap 956009, overlap 956009 TCGCGGGTGAAAAAA CGGGC AAA GCCTG CCGCTTTTTTACGGA TERM 706 956066 - 956090 + G 71 -12.2 -3.28791 | gap 1, opp_overlap 956063 956068 956070, overlap 956068 GGCTTCAGCAAAGCA G-ACAGGGCGC CGAG GCGCCCTGTGC TTGTCGAAACCGGAT TERM 707 956087 - 956068 - g 79 -15 -3.03701 | opp_overlap 956066 956068, overlap 956063 956070 CTTCAGCAAAGCAGA CAGGGCGC CGAG GCGCCCTG TGCTTGTCGAAACCG TERM 708 956068 - 956087 + G 77 -15 -2.82623 | opp_overlap 956068 956063 956070, overlap 956066 CTTCAGCAAAGCAGA CAGGGCGC CGAG GCGCCCTG TGCTTGTCGAAACCG Rmet_0874 955667 - 956140 + | hypothetical protein Rmet_0875 957129 - 956113 - | fructose-1,6-bisphosphatase TERM 709 956694 - 956716 + g 70 -11.3 -3.39327 | opp_overlap 956693 GCTGCATGAAGTCAT GCTCGGTCA CGGTC TGACCGGGC TTGTGCATGTGCAGG Rmet_0876 959889 - 957196 - | peptidase M1, alanyl aminopeptidase Rmet_0877 960099 - 960749 + | putative lipoprotein transmembrane TERM 710 960768 - 960791 + F 72 -12.5 -3.09327 | opp_overlap 960767 960790, overlap 960767 GGCGCCGCGCAATAT CCTTTCGCC GGCGGG GGCGAAAGG TATTGGCTACCGTAC TERM 711 960849 - 960904 + F 80 -4 -5.03747 | gap 4, opp_overlap 960863 GGCAAAATCTTCCAA TCGGGCGTGCCA---AAGCCCTGCCGCC GCGT GGCGGCTGGGCTAGAATGGCTC-CTCGA TTTTTTCCCGCCTTT TERM 712 960888 - 960863 - f 100 -17.5 -3.53091 | opp_overlap 960849 ATCGGGCGTGCCAAA GCCCTGCCGCC GCGT GGCGGCTGGGC TAGAATGGCTCCTCG Rmet_0878 960937 - 963258 + | malic enzyme TERM 713 963292 - 963323 + T 95 -18.8 -3.36327 | opp_overlap 963293 963297, overlap 963293 963297 CTGCCGGAAGCAAAA AGAAACAGGGCCGC GAAA GCGGCCCTGTTTCA TTGTCGGTGCGCTGG TERM 714 963293 - 963322 + T 100 -22.3 -2.61582 | opp_overlap 963293 963297, overlap 963292 963297 TGCCGGAAGCAAAAA GAAACAGGGCCGC GAAA GCGGCCCTGTTTC ATTGTCGGTGCGCTG TERM 715 963322 - 963293 - T 100 -22.3 -4.8622 | opp_overlap 963293 963292 963297, overlap 963297 TGCCGGAAGCAAAAA GAAACAGGGCCGC GAAA GCGGCCCTGTTTC ATTGTCGGTGCGCTG TERM 716 963318 - 963297 - T 100 -17.3 -4.96773 | opp_overlap 963293 963292 963297, overlap 963293 GGAAGCAAAAAGAAA CAGGGCCGC GAAA GCGGCCCTG TTTCATTGTCGGTGC TERM 717 963297 - 963318 + T 100 -17.3 -4.00868 | opp_overlap 963297 963293, overlap 963293 963292 GGAAGCAAAAAGAAA CAGGGCCGC GAAA GCGGCCCTG TTTCATTGTCGGTGC Rmet_0879 963656 - 963411 - | hypothetical protein TERM 718 963847 - 963863 + r 90 -15.1 -3.53091 | opp_overlap 963847 GCACGCAACAAAAAA GCCCGCC GGA GGCGGGC TTTACAACCAACGAT TERM 719 963863 - 963847 - R 100 -15.1 -5.4833 | opp_overlap 963847 GCACGCAACAAAAAA GCCCGCC GGA GGCGGGC TTTACAACCAACGAT Rmet_0880 964983 - 963898 - | porin TERM 720 965061 - 965101 + r 95 -16.2 -3.885 | GGTTCTCTCTAGTTC CGTGCCTGGGCGGCG-CGCT GGA ATCGGCGCCGCCT-GGCACG TTCTTGTCTCACAGT Rmet_0881 965701 - 965180 - | hypothetical protein Rmet_0882 966642 - 965698 - | polysaccharide deacetylase TERM 721 966746 - 966792 + r 72 -13.3 -2.61042 | gap 1, opp_overlap 966753, overlap 966745 966743 966752 CGCTCCCGTAGGGCT TGACAATCTGACATCGATCGGT ATCG ATTG-TCGGTGTCAGATTGTCG CTATTGATTGTTGTA Rmet_0883 968230 - 966824 - | uracil-xanthine permease TERM 722 968266 - 968276 + r 88 -2.4 -5.52384 | GGATTTGGATGGGAA CGCG CGC CGGG TTTTTTTCCTGGCCA Rmet_0884 969185 - 968442 - | GntR family transcriptional regulator Rmet_0885 969529 - 969882 + | transthyretin Rmet_0886 969914 - 971122 + | hypothetical protein TERM 723 971205 - 971220 + T 100 -11.8 -6.02919 | overlap 971196 CGGCGAGGGTTTGAG CGGGGC TTAG GCCCCG TTTTTTTATTTCTGG Rmet_0887 972014 - 971289 - | hypothetical protein TERM 724 971843 - 971863 + g 93 -3.2 -5.42265 | opp_overlap 971852, overlap 971852 GCGCGACGATGCCTG TGGAGACG AGGAA CGATTCCA TTTTTTGTCGTTTGA TERM 725 972121 - 972157 + r 71 -8 -4.09108 | gap 1, overlap 972123 TGGAAGGTCGCATTT TAGCGAGACTGG-CGAC CGAA GTCCACCCGTCTCGCTG TTTCTGTCAATTCAA TERM 726 972204 - 972225 + r 71 -6.5 -4.26079 | overlap 972205 972221 CCGCCATTCCCGATG TGCTCAGAC CGGA GTCGGAGCG TTTTCGCTGGTTTGG Rmet_0888 973388 - 972207 - | fatty acid desaturase TERM 727 973419 - 973438 + r 84 -11.4 -4.0641 | TCGGTATGCATGTGC GTCTGCCC GGAT GGGCGGAC TTTATATGCGTGACA TERM 728 973593 - 973535 - R 74 -11.1 -3.43308 | gap 1, overlap 973537 973582 GAGACCAAAAAAGCA CATCGACGGACCATGTTTGGGTGGAATC GGCC GAT-CCACACAAACATGCCCCGCCTAAG TCCGATCAGGCGGCG TERM 729 973591 - 973537 - R 74 -12.3 -3.26783 | gap 1, overlap 973535 973582 GACCAAAAAAGCACA TCGACGGACCATGTTTGGGTGGAATC GGCC GAT-CCACACAAACATGCCCCGCCTA AGTCCGATCAGGCGG Rmet_0889 974939 - 973599 - | guanine deaminase Rmet_0890 976081 - 975017 - | adenosine deaminase Rmet_0891 977121 - 976126 - | molybdenum cofactor sulfurylase Rmet_0892 979492 - 977141 - | xanthine oxidase Rmet_0893 981000 - 979504 - | molybdopterin dehydrogenase, FAD-binding Rmet_0894 981278 - 982228 + | LysR family transcriptional regulator Rmet_0895 983147 - 982293 - | putative signal peptide protein Rmet_0896 983290 - 984387 + | molybdate metabolism transcriptional regulator Rmet_0897 984484 - 985080 + | putative transmembrane protein Rmet_0898 985138 - 987693 + | hypothetical protein TERM 730 988095 - 988111 + G 71 -7.9 -4.09685 | opp_overlap 988086 GGAAGATCTGCAGAT GCGGCTG ATG CAGGCGC TTTTCCAGACTGCGG Rmet_0899 987709 - 988152 + | globin Rmet_0900 988139 - 988741 + | hypothetical protein Rmet_0901 988843 - 989553 + | TetR family transcriptional regulator Rmet_0902 989550 - 990134 + | hypothetical protein Rmet_0903 990628 - 990194 - | diacylglycerol kinase Rmet_0904 991736 - 990618 - | glycosyl transferase, group 1 Rmet_0905 992765 - 991836 - | metallophosphoesterase Rmet_0906 993980 - 992946 - | PGAP1-like protein Rmet_0907 994522 - 993977 - | RDD domain-containing protein TERM 731 994322 - 994298 - G 73 -9.2 -3.91882 | CCAGGAGAAATAGAA GGCCAGGACG AGGAA CATCCAGGCC TGATCGACGTATGGG Rmet_0908 995424 - 994618 - | putative transmembrane protein TERM 732 994704 - 994683 - G 81 -12.9 -3.60627 | opp_overlap 994684 TCACGGGAGGCGAAA GCGCGGGCG GGGT CGCCGGCGC GGGTGTCGTGGCGGC TERM 733 994813 - 994834 + g 100 -10.1 -4.85599 | gap 1 TGCCGGGCCGGCTAC GGCTGCC-GC GCC GCTGGCGGCC TTTTTCTCAGGTCGG TERM 734 994931 - 994942 + g 79 -5.8 -4.65219 | overlap 994927 CGCGGCACCTTCTCG GCTG CGGC CAGC TTCTTTTTCTGTTCT Rmet_0909 995865 - 995428 - | putative transmembrane protein Rmet_0910 996428 - 995862 - | RNA polymerase factor sigma-70 TERM 735 996696 - 996714 + H 72 -11 -3.40403 | GTGGTTGTCTCATCG GACCGCTT ATG AGGCGGTC TTCTCATGCAGACGC Rmet_0911 996807 - 998570 + | acetolactate synthase 3 catalytic subunit ilvH 998570 - 999061 + | acetolactate synthase 3 regulatory subunit Rmet_0913 999199 - 1000215 + | ketol-acid reductoisomerase TERM 736 1000349 - 1000364 + G 80 -9 -4.42868 | TCCTTGTCGGGCTTT TCAGGC CCAG GCCTGA TCTTTTTTCTTATCT Rmet_0914 1000196 - 1000459 + | hypothetical protein TERM 737 1000680 - 1000657 - g 75 -6.7 -4.36914 | gap 2 TCGTGGTTGAGAAAA CGCAGGACCCG TACG CGGG-CC-GCG AGGCACTGAAGATCA Rmet_0915 1000497 - 1001081 + | phosphatidylserine decarboxylase Rmet_0916 1001107 - 1002000 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 738 1002013 - 1002038 + F 76 -6.1 -4.60143 | opp_overlap 1002018, overlap 1002014 1002018 TGATCCAACGTAGGA ATAAAGGCGCT TTCG GGCGCCTTTGC TTTTCTGTAGTCTGT TERM 739 1002033 - 1002018 - f 71 -7.5 -4.26871 | opp_overlap 1002014 1002013 1002018 CAACGTAGGAATAAA GGCGC TTTCGG GCGCC TTTGCTTTTCTGTAG TERM 740 1002018 - 1002033 + F 77 -8.2 -4.30161 | opp_overlap 1002018, overlap 1002014 1002013 CAACGTAGGAATAAA GGCGCT TTCG GGCGCC TTTGCTTTTCTGTAG Rmet_0917 1002089 - 1002589 + | hypothetical protein TERM 741 1002781 - 1002812 + F 100 -21.6 -4.3208 | CAGGATTCTTTCGAA CGCCCCGGCCTGCA TCGT TGCACGCCGGGGCG TTTTGCATTCTGACG Rmet_0918 1002899 - 1004440 + | 2-isopropylmalate synthase TERM 742 1004528 - 1004495 - T 100 -20.4 -3.78775 | gap 1, opp_overlap 1004495, overlap 1004478 CCCGCCATCATGAAA CGCCCGCCAGTCGCG TATCC CGCGA-TGGCGGGCG TTTTGTCGTCAGCGC TERM 743 1004495 - 1004528 + T 100 -20.4 -4.46212 | gap 1, opp_overlap 1004478 1004495 CCCGCCATCATGAAA CGCCCGCCAGTCGCG TATCC CGCGA-TGGCGGGCG TTTTGTCGTCAGCGC Rmet_0919 1005070 - 1004537 - | putative lipoprotein transmembrane TERM 744 1006381 - 1006412 + G 79 -10 -4.1399 | TCACGAGGCCACCGT GCGGGCGGAAGACC ACCA GGTCCTCCAGCCGC TTTATGTCTCGGTCA Rmet_0920 1005308 - 1006561 + | putative transporter signal peptide protein rpsO 1006727 - 1006996 + | 30S ribosomal protein S15 Rmet_0922 1007349 - 1006957 - | hypothetical protein TERM 745 1007062 - 1007090 + g 100 -17.5 -4.74012 | CACGTGAGGCCGCAA TGCCTGCGTCAGC ACT GCTGAGGCAGGCA TTTTGCTTTTCTGGT Rmet_0923 1007462 - 1009639 + | polynucleotide phosphorylase/polyadenylase TERM 746 1009672 - 1009707 + F 88 -14.1 -3.60296 | opp_overlap 1009679, overlap 1009679 TCACCGCGTAGCACC CATGAAAGCGGCTGG CGATGT CCAGCCGCTTTTTTG TTTACACTGCCGGTC TERM 747 1009679 - 1009700 + F 100 -13 -5.64421 | opp_overlap 1009679, overlap 1009672 GTAGCACCCATGAAA GCGGCTGG CGATGT CCAGCCGC TTTTTTGTTTACACT TERM 748 1009700 - 1009679 - f 85 -13 -3.77196 | opp_overlap 1009672 1009679 GTAGCACCCATGAAA GCGGCTGG CGATGT CCAGCCGC TTTTTTGTTTACACT Rmet_0924 1009808 - 1010812 + | zinc-binding alcohol dehydrogenase tpiA 1010940 - 1011677 + | triosephosphate isomerase secG 1011728 - 1012096 + | preprotein translocase subunit SecG Rmet_0927 1012547 - 1012906 + | NADH dehydrogenase subunit A Rmet_0928 1012913 - 1013395 + | NADH dehydrogenase subunit B TERM 749 1013752 - 1013770 + G 79 -11 -3.87075 | overlap 1013768 ACTCGGTGAACTGGT TCGAGCGC GAA GCGTTCGA TTTCTACGGCATCGT Rmet_0929 1013397 - 1013996 + | NADH dehydrogenase subunit C Rmet_0930 1014006 - 1015259 + | NADH dehydrogenase subunit D Rmet_0931 1015465 - 1015971 + | NADH dehydrogenase subunit E TERM 750 1016412 - 1016391 - g 78 -13.1 -3.45909 | overlap 1016386 1016384 1016389 GGAACGAATACAAGA TCTTCGAGG AAGC CCTCGAAGA AGCGCGCCGCGCCGG Rmet_0932 1015973 - 1017268 + | NADH-quinone oxidoreductase, F subunit TERM 751 1017456 - 1017444 - g 75 -10.5 -3.92522 | GTTGAAGTGGAGAAA GCGCC CAA GGCGC TGCCCGCCTGCGCCA TERM 752 1018487 - 1018472 - g 77 -4.6 -4.59853 | TCAAGCCGTGAAAAA GGGCAC ACGT GTGGCC GTGATCGGCGCGGGC Rmet_0933 1017282 - 1019654 + | NADH dehydrogenase subunit G Rmet_0934 1019673 - 1020737 + | NADH dehydrogenase subunit H Rmet_0935 1020809 - 1021300 + | NADH dehydrogenase subunit I Rmet_0936 1021428 - 1022105 + | NADH dehydrogenase subunit J TERM 753 1022290 - 1022303 + G 78 -4.5 -4.78029 | GCACTACATGGGCGA CCTGG CTGG TCAGG TTTTCGTTTTCTTCA Rmet_0937 1022123 - 1022428 + | NADH dehydrogenase subunit K Rmet_0938 1022490 - 1024568 + | NADH dehydrogenase subunit L Rmet_0939 1024597 - 1026063 + | NADH dehydrogenase subunit M TERM 754 1026267 - 1026325 + G 73 -12.6 -3.42699 | gap 3, opp_overlap 1026267 1026268 1026271 CGGCAGGCGGCGAAA CGCA-CTA-CGCGTTCGCCAACCTGGTCG TGAT CGACCCGAT-GGCGAACGTGCTGGCTGCG TTCTGCTCGCTGGGT Rmet_0940 1026083 - 1027558 + | NADH dehydrogenase subunit N Rmet_0941 1027580 - 1027888 + | putative transmembrane protein Rmet_0942 1027937 - 1028572 + | NUDIX hydrolase TERM 755 1028603 - 1028575 - f 70 -10.4 -3.54741 | gap 1, overlap 1028558 1028585 CAGCATCGGCTGAAA CGGCGCA-TAACT GCTA AGCTACTGCGCCG CCTTGCAGGCTTGAG TERM 756 1028727 - 1028701 - f 70 -3.7 -4.65895 | gap 1 CCTGCCAGGCAAAAA CGGTCA-GCGAA AAAA TTAGCACGACCG TTCACAAAATTTCGA Rmet_0943 1028779 - 1029246 + | hypothetical protein TERM 757 1029316 - 1029301 - f 78 -6.8 -4.68908 | gap 1, overlap 1029254 1029302 1029303 GCGAGGTAAAACAAA CGGCCGG CGC CCG-CCG GCACCACCAATGGAG Rmet_0944 1029338 - 1030540 + | acyl-CoA dehydrogenase-like protein Rmet_0945 1030554 - 1031672 + | acyl-CoA dehydrogenase-like protein TERM 758 1031693 - 1031716 + F 100 -11.7 -5.63103 | gap 1, opp_overlap 1031693 GCGTAAGTGTTCAAA CCGCGC-CGG TGACC CCGAGCGCGG TTTTTTTCATTGGAG TERM 759 1031716 - 1031693 - f 77 -11.7 -3.57561 | gap 1, opp_overlap 1031693 GCGTAAGTGTTCAAA CCGCGC-CGG TGACC CCGAGCGCGG TTTTTTTCATTGGAG Rmet_0946 1031738 - 1032187 + | MaoC-like dehydratase TERM 760 1032180 - 1032196 + F 75 -7.9 -4.25681 | TGTACAAGCGCCGCC CGGCCTG ACG CACGCCG TTTGTTCACTTCCCT Rmet_0947 1032275 - 1032748 + | MaoC-like dehydratase TERM 761 1032785 - 1032804 + F 93 -16.4 -3.64915 | opp_overlap 1032782 1032785, overlap 1032779 GTCGCTCGACAATGA GGGCCGCG AGAT CGCGGCCC TTGTCATTTGTCCAG TERM 762 1032804 - 1032785 - f 79 -16.4 -2.82623 | opp_overlap 1032785 1032779, overlap 1032782 GTCGCTCGACAATGA GGGCCGCG AGAT CGCGGCCC TTGTCATTTGTCCAG Rmet_0948 1033351 - 1034319 + | ubiquinol oxidase, subunit II Rmet_0949 1034328 - 1036301 + | cytochrome c oxidase, subunit I Rmet_0950 1036307 - 1036951 + | cytochrome c oxidase, subunit III Rmet_0951 1036952 - 1037302 + | cytochrome C oxidase subunit IV TERM 763 1037344 - 1037327 - f 100 -14.1 -4.56597 | opp_overlap 1037327 CGGTCGTTTGAAAAA CGGGGCC TTTG GGCCCCG TTTTTTATTGGCCAC TERM 764 1037327 - 1037344 + F 100 -14.1 -5.4505 | opp_overlap 1037327 CGGTCGTTTGAAAAA CGGGGCC TTTG GGCCCCG TTTTTTATTGGCCAC TERM 765 1038528 - 1038517 - g 72 -3.6 -4.59853 | overlap 1038520 CGAAGCGTTCAAAAA GCAG TGGG CCGC GTGGGTCAAGGCCAA Rmet_0952 1037621 - 1038880 + | twin-arginine translocation pathway signal TERM 766 1038928 - 1038881 - f 83 -17 -2.52464 | overlap 1038866 GTGGCGGGGAACTGA CGGTCTGTTGCTCCCACTCCCG TGCT CGGGAGTGGGAGCAAACCACAG GTGAATGCCAACAAC Rmet_0953 1038981 - 1040618 + | inner-membrane translocator Rmet_0954 1040620 - 1041822 + | inner-membrane translocator Rmet_0955 1041819 - 1042667 + | ABC transporter-related protein Rmet_0956 1042670 - 1043362 + | ABC transporter-related protein Rmet_0957 1043471 - 1044352 + | urease accessory protein UreD ureA 1044387 - 1044689 + | urease subunit gamma TERM 767 1045187 - 1045233 + G 71 -7.9 -4.13767 | gap 1 CACGGTGCTGAGTTG CCGGCCAC-TGCTGCGGCACTG CCCT CGGTGCTGGCGTATGTGGGCGG TTTTGCCGTGGCCAC Rmet_0959 1044734 - 1045369 + | HupE/UreJ protein ureB 1045393 - 1045698 + | urease subunit beta ureC 1045698 - 1047416 + | urease subunit alpha TERM 768 1047566 - 1047603 + G 77 -12.7 -3.40403 | gap 1, opp_overlap 1047548, overlap 1047568 1047599 CGCCGAGGCTGCGTT GTTC-CTGCCGCGCGGCA CCG TGCTGCGTGGCGGCGATC TTCTGGTGGCAGAGG TERM 769 1047568 - 1047601 + G 78 -13.9 -3.27475 | gap 1, opp_overlap 1047548, overlap 1047566 1047599 CCGAGGCTGCGTTGT TC-CTGCCGCGCGGCA CCG TGCTGCGTGGCGGCGA TCTTCTGGTGGCAGA ureE 1047420 - 1048040 + | urease accessory protein UreE TERM 770 1048591 - 1048556 - g 72 -8.9 -4.08692 | gap 1, overlap 1048577 CAACTGGGCCGAAAA CCAGGTGGCAGCCGCC ATCAA GGCGG-TGCCGCTCGG CCAGGTGGCGGGCCA Rmet_0963 1048074 - 1048766 + | urease accessory protein UreF Rmet_0964 1048776 - 1049399 + | urease accessory protein UreG Rmet_0965 1049865 - 1049470 - | XRE family transcriptional regulator Rmet_0966 1050136 - 1050825 + | hypothetical protein Rmet_0967 1051526 - 1050834 - | glutathione S-transferase-like protein TERM 771 1051668 - 1051647 - R 100 -15.9 -5.7946 | opp_overlap 1051647 CCGGCAAGAAAAAAA GCCCGACAG TGAC CTGTCGGGC TTTCCTGTTTCAGCG TERM 772 1051647 - 1051668 + r 100 -15.9 -4.00532 | opp_overlap 1051647 CCGGCAAGAAAAAAA GCCCGACAG TGAC CTGTCGGGC TTTCCTGTTTCAGCG Rmet_0968 1052954 - 1051692 - | acyl-CoA dehydrogenase-like protein Rmet_0969 1053204 - 1054145 + | LysR family transcriptional regulator TERM 773 1055338 - 1055326 - g 79 -10.5 -4.17023 | CGAAGCACTCGAAAA GCGCG ATC CGCGC TACGCGCTGGCAAAG TERM 774 1055614 - 1055671 + G 73 -12.6 -3.35679 | gap 1, overlap 1055613 CTTTGCGCCTGACCG CTCGCCACCGCGCATTTCCA-CGTCGC AGGTG GCGGCGGTGGATGACCGTGGTGGCGCG TTGTCGATGACCACG Rmet_0970 1054235 - 1056196 + | gamma-glutamyltransferase 1 TERM 775 1056313 - 1056287 - T 100 -22.4 -3.34344 | opp_overlap 1056287 1056290, overlap 1056290 TGACTGGCCAATGAA GAACGGGCGCGA ATA TCGCGCCCGTTC TTCATGCATGAGCCT TERM 776 1056287 - 1056313 + T 100 -22.4 -3.18383 | opp_overlap 1056287 1056290, overlap 1056290 TGACTGGCCAATGAA GAACGGGCGCGA ATA TCGCGCCCGTTC TTCATGCATGAGCCT TERM 777 1056310 - 1056290 - T 100 -18.3 -3.81146 | opp_overlap 1056287 1056290, overlap 1056287 CTGGCCAATGAAGAA CGGGCGCGA ATA TCGCGCCCG TTCTTCATGCATGAG TERM 778 1056290 - 1056310 + T 100 -18.3 -3.73647 | opp_overlap 1056290 1056287, overlap 1056287 CTGGCCAATGAAGAA CGGGCGCGA ATA TCGCGCCCG TTCTTCATGCATGAG Rmet_0971 1057339 - 1056338 - | twin-arginine translocation pathway signal TERM 779 1057624 - 1057647 + r 86 -15.2 -3.31144 | CCCTGTGGCCGATGC GCCGGGCGCC ATCA GGCGCCCGAC TTCTGCGCGTAGGCC Rmet_0972 1058711 - 1057635 - | aminoglycoside phosphotransferase Rmet_0973 1059533 - 1058754 - | enoyl-CoA hydratase TERM 780 1059590 - 1059565 - R 100 -14.7 -4.98531 | opp_overlap 1059588 GGCGGAAATGAAAAA GGCGCCCCG TGTCTCGT CGGGGCGCC TGCGTGGGGTCAGGC Rmet_0974 1061123 - 1059600 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 781 1059946 - 1059987 + g 78 -13.7 -3.21912 | gap 1, opp_overlap 1059928 1059927 TGCGCGGCGTCGCGT GCGGCG-GCGCTGGTGGCCG GCG TGGTCATCAGCGTGCGGCGC TTGGTGGCTTCGAAC Rmet_0975 1061300 - 1061941 + | glutathione S-transferase-like protein Rmet_0976 1063171 - 1062002 - | putative aminotransferase Rmet_0977 1063759 - 1063220 - | hypothetical protein Rmet_0978 1063800 - 1064585 + | hypothetical protein Rmet_0979 1064604 - 1065746 + | peptidase M14, carboxypeptidase A Rmet_0980 1066594 - 1065842 - | putative lipoprotein transmembrane Rmet_0981 1067760 - 1066888 - | N-formylglutamate amidohydrolase Rmet_0982 1068767 - 1067781 - | hypothetical protein TERM 782 1067859 - 1067891 + g 85 -7.6 -4.62471 | gap 1, overlap 1067877 CTGCTGCGCGAAGTG CTGCGGCGTGTCGCC CACC GGCGTGGCGCCG-AG TTTTTCGAGCTTGGC TERM 783 1069249 - 1069263 + G 79 -7 -4.56775 | overlap 1069251 GCCAAGTGGCTGATT CCGCGG CTG CCGCAG TTTTTCGCCCGGCAT Rmet_0983 1068916 - 1069818 + | LysR family transcriptional regulator Rmet_0984 1071046 - 1069871 - | hypothetical protein Rmet_0985 1071656 - 1071063 - | GCN5-related N-acetyltransferase Rmet_0986 1072545 - 1071667 - | ATPase Rmet_0987 1072988 - 1073332 + | cytochrome c, class I Rmet_0988 1073346 - 1073744 + | cytochrome c, class I TERM 784 1073796 - 1073826 + T 72 -13.5 -2.59683 | gap 1, opp_overlap 1073754 1073796 1073802, overlap 1073802 GGAATCGAAGCAAAA GAAAAA-GCCGCTC ATTC GAGCGGCTTTTTTC GTTCTGCAGTGCGGT TERM 785 1073825 - 1073796 - T 100 -13.7 -4.45664 | opp_overlap 1073796 1073802, overlap 1073754 1073802 GGAATCGAAGCAAAA GAAAAAGCCGCTC ATTC GAGCGGCTTTTTT CGTTCTGCAGTGCGG TERM 786 1073802 - 1073819 + T 100 -12.7 -5.32944 | opp_overlap 1073802 1073796, overlap 1073796 GAAGCAAAAGAAAAA GCCGCTC ATTC GAGCGGC TTTTTTCGTTCTGCA TERM 787 1073819 - 1073802 - T 100 -12.7 -5.54338 | opp_overlap 1073796 1073802, overlap 1073796 GAAGCAAAAGAAAAA GCCGCTC ATTC GAGCGGC TTTTTTCGTTCTGCA Rmet_0989 1074921 - 1073842 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 788 1075013 - 1074993 - H 100 -14 -5.60993 | opp_overlap 1074993 GCGGGGATAAAAAAA GCCGCCAG GGTCG CTGGCGGC TTTTTTTAGTATTCG TERM 789 1074993 - 1075013 + H 100 -14 -5.63374 | opp_overlap 1074993 GCGGGGATAAAAAAA GCCGCCAG GGTCG CTGGCGGC TTTTTTTAGTATTCG TERM 790 1075552 - 1075537 - g 74 -4.6 -4.56597 | overlap 1075538 1075539 TGCTGGCGGCAAAAA CCCGCA CGGA TGCGCG CTACCTGCGCGAGTG Rmet_0990 1075377 - 1076432 + | methyltransferase type 12 Rmet_0991 1077948 - 1076488 - | microcin-processing peptidase 2 Rmet_0992 1078836 - 1078015 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 791 1078636 - 1078662 + g 70 -13.8 -2.63858 | overlap 1078635 GCTCTGCACCGGACC GTCGCCATCC TGTTCGC GGATGGCGAC CTTGTCGGTCTCGTG Rmet_0993 1083061 - 1078865 - | hypothetical protein TERM 792 1079740 - 1079766 + g 74 -10.1 -3.73224 | opp_overlap 1079739 1079738 CGTGCAGGACGAACC TGTCGACGCTC AGGTC GAGCGCCGGCA TTTCCTCGACGCTGC TERM 793 1080062 - 1080079 + g 70 -5.5 -4.31433 | overlap 1080061 1080060 ACGCCCTATGTCACC GGCGG GTTTGTCG CCGCC TTTGTTATCCGGGTC TERM 794 1082387 - 1082347 - G 93 -19.8 -2.73875 | gap 2, opp_overlap 1082343, overlap 1082344 TGGCCTGGAATACCA GCGG-TCGCGGCGC-CAGCG CGG CGCTGCGCGCCTCGAGCCGC ACAATGTGCTGGGCG Rmet_0994 1083209 - 1086247 + | glutamate-ammonia ligase adenylyltransferase TERM 795 1086259 - 1086311 + G 71 -9.8 -3.71991 | gap 2 CTGAGCGCGCCTTGC CG-GGCTGGC-CGGCCATGCTCGCCG CAG TGGCGGGTGTGGCGGCGTTGGCCGCG TTGTTCACGTTTGTG Rmet_0995 1086234 - 1086848 + | putative transmembrane protein Rmet_0996 1088628 - 1087006 - | peptidase MprA Rmet_0997 1089153 - 1088728 - | putative lipoprotein Rmet_0998 1090959 - 1089190 - | DNA repair protein RecN TERM 796 1090868 - 1090827 - G 72 -12.9 -3.08679 | opp_overlap 1090827 CCCGTTCACCTAACA CCAGGGCGAGCGCGTCGAT GAGG ATCGACTTGCCCGCGCCGG TTTCACCCGTGAAGA ppnK 1091981 - 1091040 - | inorganic polyphosphate/ATP-NAD kinase hrcA 1092058 - 1093104 + | heat-inducible transcription repressor TERM 797 1094055 - 1094090 + G 81 -14 -3.53444 | GCCGAACTGGGCAAG GTCGGGACACAGCGCG TGGA CGTGTTCTGTCCCGGC TTTCCGGCCGACTGC hemH 1093215 - 1094330 + | ferrochelatase Rmet_1002 1094380 - 1094775 + | RNA-binding S4 TERM 798 1094782 - 1094814 + T 100 -24.9 -2.62933 | AAGGGGTGATGGTTG CGGCTAGCCGGGGCG GGG CGCTCCGGCTGGCCG TAATGTGGCGGGTTA Rmet_1003 1095018 - 1094827 - | hypothetical protein TERM 799 1095217 - 1095244 + H 80 -3.4 -5.13722 | gap 1, overlap 1095217 1095219 1095220 ACACCCGACTCACCC G-ATGGCCTGC CGCCAGA GCGGGCCGTGC TTTTGTTTTGATACG Rmet_1004 1095267 - 1095809 + | GrpE protein TERM 800 1095836 - 1095870 + F 100 -17.3 -3.53444 | gap 2, opp_overlap 1095841, overlap 1095841 CCGCATACGGCAGTA CGA-AACGCCCGG-GCC ATT GGCGCCGGGCGTTGTCG TTTCAGGAGCGATCG TERM 801 1095841 - 1095864 + F 93 -16 -3.60151 | gap 1, opp_overlap 1095841, overlap 1095836 TACGGCAGTACGAAA CGCCCGG-GCC ATT GGCGCCGGGCG TTGTCGTTTCAGGAG TERM 802 1095864 - 1095841 - f 95 -16 -3.79251 | gap 1, opp_overlap 1095841 1095836 TACGGCAGTACGAAA CGCCCGG-GCC ATT GGCGCCGGGCG TTGTCGTTTCAGGAG TERM 803 1095945 - 1095902 - g 75 -3.9 -4.64334 | gap 3, overlap 1095905 1095906 AATGTCTGAAGAAAA CCA-GCC--GCACCTCGATCAC CGC GCGTTCGAGGCGCTCGACATGG CCGAAGTCGATGGCG Rmet_1005 1095888 - 1096292 + | putative thioredoxin protein Rmet_1006 1097690 - 1096281 - | putative phospholipase Rmet_1007 1098170 - 1097739 - | hypothetical protein TERM 804 1098351 - 1098377 + G 100 -19.5 -3.21416 | ACCGGCACCCTGGGC CACGCCCGCGA CAAGC TCGCGGGCGTG TTGCTGATCGCGCTC Rmet_1008 1098321 - 1099259 + | hypothetical protein Rmet_1009 1099347 - 1099934 + | hypothetical protein TERM 805 1099982 - 1099953 - T 73 -10.1 -3.59979 | opp_overlap 1099959, overlap 1099959 GCCGCTGACCCGAAA CAAAAAGCGACCC ATCG AGGTCGCTTTTTT GTTGGCGCGTGGACG TERM 806 1099976 - 1099959 - T 100 -9.1 -5.28942 | opp_overlap 1099959, overlap 1099953 GACCCGAAACAAAAA GCGACCC ATCG AGGTCGC TTTTTTGTTGGCGCG TERM 807 1099959 - 1099976 + T 100 -8.4 -5.4505 | opp_overlap 1099959 1099953 GACCCGAAACAAAAA GCGACC CATCGA GGTCGC TTTTTTGTTGGCGCG Rmet_1010 1100749 - 1100024 - | putative uncharacterized protein involved in ubiquinone biosynthesis Rmet_1011 1101747 - 1100779 - | alpha/beta hydrolase fold Rmet_1012 1103261 - 1101744 - | cyclohexanone monooxygenase TERM 808 1103415 - 1103399 - g 71 -10.8 -3.68222 | GCCGAAGCCGAAGAA CGGCGC GCCCA GCGCCG CGGGCAACTTATTGC TERM 809 1103686 - 1103704 + G 70 -7.3 -3.96624 | overlap 1103688 CACGCTGCAGTGCGA GCCCCGC TCGGC GCGGGTC TTTCTGGTGGAGATC TERM 810 1103824 - 1103854 + G 70 -14 -2.55668 | overlap 1103823 1103826 CAAAGAGCCGGATCC GATGCTGCTGGCCG GTG TGGCTGGCGGCATC ATTCATGTGGCGCTG Rmet_1013 1103336 - 1103965 + | TetR family transcriptional regulator Rmet_1014 1104631 - 1103987 - | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III Rmet_1015 1105467 - 1104628 - | ferredoxin Rmet_1016 1105662 - 1106294 + | TetR family transcriptional regulator TERM 811 1106346 - 1106325 - T 100 -17.3 -5.71712 | opp_overlap 1106325 CGGCAGATAAAAAAA CGCCCGCGA GTCT TCGCGGGCG TTTGACTTTGATGCG TERM 812 1106325 - 1106346 + T 100 -17.3 -3.87149 | opp_overlap 1106325 CGGCAGATAAAAAAA CGCCCGCGA GTCT TCGCGGGCG TTTGACTTTGATGCG Rmet_1017 1107617 - 1106373 - | polyhydroxyalkanoate depolymerase, intracellular TERM 813 1107823 - 1107785 - R 90 -14.7 -3.55444 | gap 1, opp_overlap 1107791 1107800 1107801, overlap 1107791 TTCCGAGCGGCCAAA GAAAAAGGCGACC-GGAG TGGC CTCCAGGTCGCCTTTCGC TGCCGGATGCCACAT TERM 814 1107817 - 1107791 - R 100 -14.5 -5.27335 | gap 1, opp_overlap 1107791 1107800 1107801, overlap 1107785 GCGGCCAAAGAAAAA GGCGACC-GGAG TGGC CTCCAGGTCGCC TTTCGCTGCCGGATG TERM 815 1107791 - 1107817 + r 90 -14.5 -3.6502 | gap 1, opp_overlap 1107791 1107785, overlap 1107800 1107801 GCGGCCAAAGAAAAA GGCGACC-GGAG TGGC CTCCAGGTCGCC TTTCGCTGCCGGATG Rmet_1018 1109066 - 1107870 - | aromatic amino acid aminotransferase TERM 816 1109851 - 1109818 - g 70 -11.1 -3.30124 | gap 1, overlap 1109790 GCGTACTGGCGACAA GATCAGCCAGCGCGAT GTC ATCGC-CCGCCTGATC GCGATGCAGTACACG Rmet_1019 1109264 - 1111357 + | excinuclease ABC subunit B Rmet_1020 1111452 - 1111673 + | hypothetical protein Rmet_1021 1111724 - 1111963 + | hypothetical protein Rmet_1022 1112013 - 1112492 + | protein tyrosine phosphatase Rmet_1023 1112492 - 1114603 + | putative site-specific recombinase transmembrane protein Rmet_1024 1114701 - 1115255 + | BadM/Rrf2 family transcriptional regulator Rmet_1025 1115331 - 1116551 + | cysteine desulfurase IscS Rmet_1026 1116608 - 1117009 + | scaffold protein TERM 817 1117033 - 1117060 + F 76 -14.1 -3.01712 | AGACGGTTTGCATGA CCGCGCGTGGC AAGTGG GTCGCGCGCGG TGTTCGACAGCAAGG Rmet_1027 1117060 - 1117401 + | iron-sulfur cluster assembly protein IscA TERM 818 1117429 - 1117447 + F 100 -13.8 -5.06414 | opp_overlap 1117428 CGAGGCATGCAACAG GGGGCGGC ATA GCCGCTCC TTTTTGTTGGGGAAG hscB 1117466 - 1117984 + | co-chaperone HscB hscA 1117994 - 1119859 + | chaperone protein HscA Rmet_1030 1119901 - 1120239 + | ferredoxin, 2Fe-2S type Rmet_1031 1120262 - 1120456 + | hypothetical protein TERM 819 1120500 - 1120481 - T 93 -6.4 -5.24531 | opp_overlap 1120481 ACCTTTGAGAAAAAA GCACGG TGATCATG CCGTGC TTTTTTGTTTTCCGC TERM 820 1120481 - 1120500 + T 100 -7.8 -5.79595 | opp_overlap 1120481 ACCTTTGAGAAAAAA GCACGGTG ATCA TGCCGTGC TTTTTTGTTTTCCGC Rmet_1032 1121563 - 1120517 - | hypothetical protein Rmet_1033 1122356 - 1121652 - | 17 kDa surface antigen TERM 821 1122589 - 1122562 - R 83 -15.6 -3.08812 | opp_overlap 1122567, overlap 1122567 GGCGCCCCAACAAAG CAAAAGCCCCGC GTGG GCGGGGCTCTCG TTCAAGGTCATATTC TERM 822 1122584 - 1122567 - R 100 -14.1 -4.67942 | opp_overlap 1122567, overlap 1122562 CCCAACAAAGCAAAA GCCCCGC GTGG GCGGGGC TCTCGTTCAAGGTCA TERM 823 1122567 - 1122584 + r 75 -14.1 -2.90723 | opp_overlap 1122562 1122567 CCCAACAAAGCAAAA GCCCCGC GTGG GCGGGGC TCTCGTTCAAGGTCA lysS 1124181 - 1122634 - | lysyl-tRNA synthetase TERM 824 1124195 - 1124221 + r 78 -13.6 -3.20432 | ATGATGTGAGGTTCG ATCGCGCGGCGC GGA GCGTCGCGCGGG TTCGGTTCAATGTAT Rmet_1035 1125011 - 1124241 - | short chain dehydrogenase Rmet_1036 1126220 - 1125147 - | peptide chain release factor 2 TERM 825 1126347 - 1126365 + H 80 -14.6 -3.06696 | opp_overlap 1126342 1126341 1126343, overlap 1126353 CAACGAAAATGCGAA CCGTTCGC GCA GCGAACGG TCTATTCGCGGAGCC Rmet_1037 1126456 - 1127178 + | peptidase M23B Rmet_1038 1128953 - 1127253 - | exonuclease RecJ Rmet_1039 1130118 - 1129000 - | hypothetical protein TERM 826 1130454 - 1130432 - g 72 -13.4 -3.12351 | CTGTCGCACATCGAA GTCATCGGCG CCG CGCCGCTGAC GGACTGGCAGAAGAC Rmet_1040 1130222 - 1131472 + | LolC/E family lipoprotein releasing system, transmembrane protein Rmet_1041 1131465 - 1132214 + | lipoprotein releasing system, ATP-binding protein TERM 827 1132346 - 1132362 + G 77 -12.3 -3.65812 | GGACGCGGCTGCGGC TGCCGGT GTG ACCGGCA TTGTGTTGCCGGCCG Rmet_1042 1132266 - 1133093 + | TatD-related deoxyribonuclease Rmet_1043 1133224 - 1135779 + | DNA internalization-related competence protein ComEC/Rec2 Rmet_1044 1136762 - 1135746 - | RpiR family transcriptional regulator TERM 828 1135818 - 1135847 + g 75 -9.2 -3.94746 | overlap 1135813 1135822 GGCAGGGCTGTCGGA CTTAGTCGGGCG ACGCGC CGCCCGGCTCGG TTTGATTGACTGTGA TERM 829 1137655 - 1137642 - g 86 -9.5 -4.56133 | GTCGAACAAGGAAAA GGCGC GTGT GCGCC AGCTCTATGCCACCG TERM 830 1138286 - 1138311 + G 71 -12.5 -3.28712 | CGAGCGGGGATGAGT CGGTGCTGGCG CCAG CGTCGGCGCCG TTCTCACCCGAGGGG Rmet_1045 1137061 - 1138950 + | phosphogluconate dehydratase TERM 831 1139154 - 1139201 + G 81 -14.2 -3.53012 | gap 1, opp_overlap 1139162 1139165, overlap 1139165 GGGCGTTTCCGGCAG CGGCAA-GAGCACGGTCGGCCAG ATG CTGGCGGACCGTCTTCATTGCGG TTTCCACGACGCGGA TERM 832 1139191 - 1139162 - g 71 -12.9 -3.04144 | gap 1, opp_overlap 1139154 1139165, overlap 1139165 CCGGCAGCGGCAAGA GCACGGTCGGCCAG ATG CTGGCGGACCGT-C TTCATTGCGGTTTCC TERM 833 1139189 - 1139165 - g 78 -15.7 -2.74523 | opp_overlap 1139154 1139165, overlap 1139162 GCAGCGGCAAGAGCA CGGTCGGCCAG ATG CTGGCGGACCG TCTTCATTGCGGTTT TERM 834 1139165 - 1139189 + G 86 -15.7 -3.25941 | opp_overlap 1139165 1139162, overlap 1139154 GCAGCGGCAAGAGCA CGGTCGGCCAG ATG CTGGCGGACCG TCTTCATTGCGGTTT TERM 835 1139607 - 1139596 - g 79 -5.8 -4.59109 | opp_overlap 1139601, overlap 1139597 GATATTCTGGAAAAA TGCC CGCC GGCA TCGGCCGCCTGTTCC Rmet_1046 1139122 - 1139637 + | gluconate kinase TERM 836 1140739 - 1140769 + G 76 -5.5 -4.57341 | GACGTGATCTACCGG CGCGTGGA-CGACGA TTT TC-TCGATCCACTCG TTTTTCGCCACGATT Rmet_1047 1139863 - 1141338 + | hypothetical protein Rmet_1048 1141470 - 1142423 + | hypothetical protein TERM 837 1142458 - 1142436 - f 85 -16.2 -3.14564 | TGACCGTTGCAGGAA CCCCCGGCGC CAC GCGCCGGGTG TGCGGTATCCCCGTC TERM 838 1143091 - 1143113 + G 71 -12.7 -2.91912 | gap 1 TGGTGGCGGCATGTC GCGCGCTCGG TATT CCG-GCGCGC TATGTCAGTGGCTAC Rmet_1049 1142484 - 1143365 + | transglutaminase-like protein TERM 839 1144156 - 1144179 + G 71 -7.4 -4.08216 | gap 1 GCATGATCCGCGACA CCTGGGGCCAG CGC CTG-CGCCAGG TTTTCGGCGAGATCG Rmet_1050 1143492 - 1144298 + | putative proteasome-type protease Rmet_1051 1144346 - 1145167 + | alpha/beta hydrolase fold TERM 840 1145173 - 1145203 + F 76 -12.5 -3.4072 | overlap 1145178 CGGGCGCTGAAGTCT GGGAAGCCGGCGC GCGCG GCGCCGGCTTGGC TTGTGGTACGGCGTG TERM 841 1145178 - 1145198 + F 85 -15.4 -3.25072 | overlap 1145173 GCTGAAGTCTGGGAA GCCGGCGC GCGCG GCGCCGGC TTGGCTTGTGGTACG Rmet_1052 1145343 - 1146992 + | CTP synthetase TERM 842 1147041 - 1147056 + G 80 -4.6 -4.77438 | GTGTGGATTCGACGT CGGCCT CGAC AAGCCG TTTTTCCTGATCGCT Rmet_1053 1147018 - 1147887 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 843 1148114 - 1148097 - g 71 -9.1 -3.72576 | overlap 1148082 GTGCTTTCCACGAAA GCCATGC AGGC GCACGGC GCGGAAGTGCTGGTG Rmet_1054 1148016 - 1148306 + | hypothetical protein eno 1148371 - 1149660 + | phosphopyruvate hydratase TERM 844 1149721 - 1149694 - f 100 -25.6 -4.84359 | opp_overlap 1149694 TGAGTTCCAGAAAAA GCGCCGCCCCGG AGCA CCGGGGCGGCGC TTTTTTTGTTGTCAA TERM 845 1149694 - 1149721 + F 100 -25.6 -5.88565 | opp_overlap 1149694 TGAGTTCCAGAAAAA GCGCCGCCCCGG AGCA CCGGGGCGGCGC TTTTTTTGTTGTCAA ftsB 1149866 - 1150207 + | cell division protein FtsB Rmet_1057 1150701 - 1150306 - | hypothetical protein Rmet_1058 1151850 - 1150846 - | Hsp33 protein Rmet_1059 1152424 - 1151900 - | hexapaptide repeat-containing transferase TERM 846 1152597 - 1152619 + G 79 -14.8 -2.98823 | TTCGCCACTTGCCAC GCGCCGCCGG GCG CTGGCGGTGC TGTGTATCACCGACG Rmet_1060 1152550 - 1153401 + | hypothetical protein Rmet_1061 1155185 - 1153398 - | AMP-dependent synthetase and ligase TERM 847 1154510 - 1154556 + g 71 -12.2 -3.29471 | gap 1, overlap 1154486 CCGCGCCTTTCGGGG GGCCGGTGGTGCCGCTGGTGT AGATCA GCACC-GCGGCTTCCTCGGCC TTGGTCTGCTCGGCG Rmet_1062 1155271 - 1156164 + | alpha/beta hydrolase fold Rmet_1063 1157282 - 1156221 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 848 1157495 - 1157514 + GH 70 -10 -3.4252 | gap 1, overlap 1157494 ACGTGGCGGCCCGGG CGC-ACGCC GGT GGCGTCGCG TTCTGGTCGCTGACG TERM 849 1157718 - 1157702 - gH 84 -11.5 -4.07687 | opp_overlap 1157711 ATGGCCTGGCGAAAA CGCGCGA TGG CCGCGCG CGCCGGGCGCAGGAT Rmet_1064 1157281 - 1158249 + | PHP-like protein Rmet_1065 1158271 - 1158918 + | Sua5/YciO/YrdC/YwlC Rmet_1066 1158967 - 1159632 + | peptidase M50 Rmet_1067 1159673 - 1160248 + | methyltransferase type 12 Rmet_1068 1160386 - 1161270 + | dihydrodipicolinate synthase Rmet_1069 1161328 - 1162569 + | putative transmembrane protein TERM 850 1162622 - 1162590 - f 76 -14.2 -3.07816 | gap 1 GTCCCAGGCAGTCAA GTGGCAC-CGACGGC GCGA GCCGTCGAGTGCCAA CCCGTGCGAGCGCAT TERM 851 1162628 - 1162653 + F 100 -10.5 -5.00616 | gap 1, overlap 1162632 CGAGTGCCAACCCGT GCGA-GCGCATC CAT GATGCGCTTTGC TTTTTTGGGCAGCGG TERM 852 1162632 - 1162648 + F 100 -12.3 -4.42765 | overlap 1162628 TGCCAACCCGTGCGA GCGCATC CAT GATGCGC TTTGCTTTTTTGGGC Rmet_1070 1162640 - 1163428 + | beta-lactamase-like protein Rmet_1071 1163722 - 1163438 - | hypothetical protein TERM 853 1163487 - 1163504 + g 100 -12.7 -5.24129 | opp_overlap 1163487 CGAGAAATAAAAAAA GCCGACC CGAA GGTCGGC TTTTTTATCGGACGA TERM 854 1163504 - 1163487 - G 100 -12.7 -6.02919 | opp_overlap 1163487 CGAGAAATAAAAAAA GCCGACC CGAA GGTCGGC TTTTTTATCGGACGA Rmet_1072 1165087 - 1163960 - | cupin 4 TERM 855 1164998 - 1164988 - G 72 -8.2 -4.14392 | CGGCAAGCTCGAAAA GCGC CTC GCGC GACACTGGGGGCACG Rmet_1073 1165153 - 1165713 + | putative fkbp-type peptidyl-prolyl cis-trans isomerase (rotamase) protein TERM 856 1165755 - 1165784 + T 100 -19.5 -4.57533 | opp_overlap 1165755 1165762, overlap 1165762 AGGTCATCGCGAACA TGAAAAAGCCGGC ATTT GCCGGCTTTTTCA TTTTGTCCTCTTGTT TERM 857 1165784 - 1165755 - T 90 -19.5 -3.04263 | opp_overlap 1165755 1165762, overlap 1165762 AGGTCATCGCGAACA TGAAAAAGCCGGC ATTT GCCGGCTTTTTCA TTTTGTCCTCTTGTT TERM 858 1165762 - 1165777 + T 100 -11.8 -5.1417 | opp_overlap 1165755 1165762, overlap 1165755 CGCGAACATGAAAAA GCCGGC ATTT GCCGGC TTTTTCATTTTGTCC TERM 859 1165777 - 1165762 - T 100 -11.8 -4.87626 | opp_overlap 1165762 1165755, overlap 1165755 CGCGAACATGAAAAA GCCGGC ATTT GCCGGC TTTTTCATTTTGTCC Rmet_1074 1166860 - 1165808 - | putative transmembrane protein Rmet_1075 1169607 - 1166857 - | DNA mismatch repair protein Rmet_1076 1170227 - 1169790 - | hypothetical protein TERM 860 1170048 - 1170026 - G 71 -7.6 -4.17048 | opp_overlap 1170043, overlap 1170047 TCGTTTTCAAAACAA CCTCCTCGCC AAG GGAGAGCAGG GCCACCACGTGAGTC Rmet_1077 1170403 - 1170224 - | YcfA-like protein TERM 861 1170581 - 1170540 - R 100 -23.9 -4.13343 | opp_overlap 1170545, overlap 1170530 1170545 AGAAAGTGTGCAAAA CGAAACAGGCGCCACCGGA TCTC TCCGATGGCGCCTGTTTGG AAGCAGCCTGGGGGC TERM 862 1170545 - 1170576 + r 100 -20.2 -3.53224 | opp_overlap 1170545 1170540 1170530 GTGTGCAAAACGAAA CAGGCGCCACCGGA TCTC TCCGATGGCGCCTG TTTGGAAGCAGCCTG TERM 863 1170576 - 1170545 - R 100 -22.4 -4.19735 | opp_overlap 1170545, overlap 1170540 1170530 GTGTGCAAAACGAAA CAGGCGCCACCGGA TCTC TCCGATGGCGCCTG TTTGGAAGCAGCCTG Rmet_1078 1171428 - 1170607 - | inositol monophosphatase TERM 864 1171368 - 1171338 - G 75 -11.9 -3.53012 | gap 1, opp_overlap 1171337 1171338 GTTGTTTGCGCGAAA CGCGCACCAGATCG ACGT CGATC-GACGCGCG GTTGATGATGGACCC TERM 865 1171576 - 1171543 - H 80 -11.6 -3.82191 | overlap 1171544 CGAATTGTAGAAGAA CGGGGTGCGTCGCC ATGTGA GGCGCCGCACCGCA ATTGGAAGGCAGCAT TERM 866 1171575 - 1171544 - H 70 -12.9 -2.88832 | overlap 1171543 GAATTGTAGAAGAAC GGGGTGCGTCGCC ATGTGA GGCGCCGCACCGC AATTGGAAGGCAGCA Rmet_1079 1171656 - 1172525 + | RNA methyltransferase TrmH, group 1 TERM 867 1172710 - 1172692 - f 90 -14.6 -3.61398 | GCGGCTTTCCAAGAA GCCCTGAC GTC GTCAGGGC GGGGCGGCAGGCGCG Rmet_1080 1172854 - 1173597 + | serine O-acetyltransferase Rmet_1081 1174437 - 1173646 - | UDP-2,3-diacylglucosamine hydrolase TERM 868 1174195 - 1174170 - G 75 -13.9 -3.02471 | CGTGCATCAGATAGA CCGGCACGCCG GCAT CGGCAAGCCGG CGCAGCGCGGCGGCA TERM 869 1174421 - 1174378 - G 72 -11.5 -3.53745 | overlap 1174379 1174381 GAGATCGGAAATGAA CCACGCCGGCGCCTGCACC TCGATC GGGGCGGCCACCGGCGTGC GGGTGGGAGCGGTCA TERM 870 1174420 - 1174379 - G 75 -15 -2.71765 | overlap 1174378 1174381 AGATCGGAAATGAAC CACGCCGGCGCCTGCACC TCGATC GGGGCGGCCACCGGCGTG CGGGTGGGAGCGGTC Rmet_1082 1175006 - 1174506 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Rmet_1083 1175669 - 1175061 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Rmet_1084 1176506 - 1175751 - | tetratricopeptide TPR_2 cysS 1176601 - 1178076 + | cysteinyl-tRNA synthetase Rmet_1086 1178073 - 1178858 + | HhH-GPD Rmet_1087 1179006 - 1179977 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 871 1180020 - 1180063 + G 91 -14.7 -3.87815 | gap 1, opp_overlap 1180026, overlap 1180026 GATCGCGCGTCTGAC CGAC-AAGGTCGCACAGGCT CTACA GGCCAGTGCGACCTTTGTTG TTTCTGGCGATAGGC TERM 872 1180056 - 1180026 - g 80 -14 -3.35679 | opp_overlap 1180020 1180026 GCGTCTGACCGACAA GGTCGCACAGGC TCTACAG GCCAGTGCGACC TTTGTTGTTTCTGGC TERM 873 1180026 - 1180056 + G 100 -14.7 -4.63048 | opp_overlap 1180026, overlap 1180020 GCGTCTGACCGACAA GGTCGCACAGGCT CTACA GGCCAGTGCGACC TTTGTTGTTTCTGGC TERM 874 1180120 - 1180099 - g 88 -17.3 -3.06501 | GAGACTGGTAGCCAA CGGGCTGCC GACG GGCAGCCCG TGACCGTCGCGGTGG TERM 875 1180989 - 1181008 + G 71 -13.6 -2.76736 | opp_overlap 1180978, overlap 1180987 1180985 TCAAGGTGGCGAGCC GGCCATCG CGCA CGATGGCC TGGTGTTGCGTCGTT TERM 876 1181032 - 1181076 + G 71 -9.2 -3.76125 | gap 2 CGTCGTTTCCGTGAC CGGCTGCTGGCCTGCCCAGCCG TGT CCGCTGGA-ATGCCGGC-GCCG TTTGCATTCGAGTGG Rmet_1088 1179979 - 1181442 + | tRNA(Ile)-lysidine synthetase-like protein Rmet_1089 1181621 - 1182871 + | aspartate kinase TERM 877 1182969 - 1183000 + T 70 -10.3 -3.53811 | gap 1 TCGCTAGAATACGCG CTT-CGTTGTGCGG CTCCC TCGCACAACGCAAG TTTGGGAGACGTGGC TERM 878 1183121 - 1183146 + T 100 -15.5 -5.49579 | TGTATTGGCGGCGAA CCCCGGAAGAT CGCG GTCTTCCGGGG TTTTGTTTTTTCTGG Rmet_1090 1185125 - 1183533 - | EAL-containing signal transduction protein Rmet_1091 1187322 - 1185361 - | diguanylate cyclase TERM 879 1187468 - 1187511 + H 76 -14 -3.02511 | TGCAAGATGGACCGT CG-CGCCTGTCGTCGGGCGA GCCTGA TC-CCTGACGGCAGGCGCCG TCTTCCCGGCATCAC Rmet_1092 1187734 - 1189239 + | anion transporter Rmet_1093 1189387 - 1190415 + | alcohol dehydrogenase GroES-like protein TERM 880 1191293 - 1191315 + G 100 -3.4 -5.71983 | CGGTGGTGGCTTTAC GCTGGTTG GCACGTA CAAGCAGC TTTTTTTCTCCTTGC Rmet_1094 1190643 - 1191692 + | hypothetical protein Rmet_1095 1191702 - 1192862 + | hypothetical protein TERM 881 1193314 - 1193348 + G 75 -3.4 -4.84359 | overlap 1193319 TTGTGATTACCGAGC CGGCGGTCGGATACGG TGT CGGTATCGGGCTCCTG TTTTTCTCCGAGTCC Rmet_1096 1193118 - 1194269 + | glyceraldehyde 3-phosphate dehydrogenase Rmet_1097 1194596 - 1194300 - | hypothetical protein Rmet_1098 1194940 - 1196133 + | cobalamin synthesis protein, P47K TERM 882 1196501 - 1196516 + G 75 -6.8 -4.37502 | gap 1, opp_overlap 1196494, overlap 1196492 1196498 GCGAGACAGGCAGCG CGC-GGC TAC GCCTGCG TTTTGATCTGCTAGT Rmet_1099 1196149 - 1197123 + | putative GTP cyclohydrolase Rmet_1100 1197120 - 1198538 + | cysteinyl-tRNA synthetase Rmet_1101 1198548 - 1199129 + | 6-pyruvoyl-tetrahydropterin synthase-like protein Rmet_1102 1199149 - 1199709 + | carbonic anhydrase TERM 883 1200159 - 1200177 + G 70 -11 -3.35679 | opp_overlap 1200154, overlap 1200160 TGCGGCACAAGGCCG TGCGTGGT GCG ACCACGCG TTCTACATCGGCGGG Rmet_1103 1199767 - 1201164 + | dihydroorotase Rmet_1104 1203416 - 1201230 - | TonB-dependent siderophore receptor Rmet_1105 1203664 - 1204074 + | hypothetical protein TERM 884 1205684 - 1205655 - g 100 -13.5 -4.56597 | CGGGGCCCCGAAAAA CGCGCAGCTCCTG CAGT CAGGCACCGCGCG GCGGAGGTGTCGCCA Rmet_1106 1204074 - 1205702 + | PepSY-associated TM helix Rmet_1107 1205699 - 1206061 + | hypothetical protein Rmet_1108 1206098 - 1208383 + | TonB-dependent siderophore receptor TERM 885 1208437 - 1208384 - T 100 -21.8 -3.21218 | gap 1, overlap 1208385 ACCGTGGACTACTAA GCGTGCC-TCGTCATGCCGGGCGGC GATGG GCCACCCGGCATGACAACGGCCCGG GCATCTACCCCACGA TERM 886 1208436 - 1208385 - T 100 -25.3 -2.52516 | gap 1, overlap 1208384 CCGTGGACTACTAAG CGTGCC-TCGTCATGCCGGGCGGC GATGG GCCACCCGGCATGACAACGGCCCG GGCATCTACCCCACG Rmet_1109 1208810 - 1208442 - | hypothetical protein TERM 887 1208862 - 1208903 + r 73 -10.1 -3.60234 | opp_overlap 1208888 1208891, overlap 1208901 CGCTCCCGATCGTTA CCGGACCGGCCGGTG AGCACGACACAC CACCGGACCGTCCGG TTTCACCGTATATCG Rmet_1110 1210158 - 1208965 - | Orn/DAP/Arg decarboxylase 2 Rmet_1111 1210952 - 1210197 - | HpcH/HpaI aldolase TERM 888 1210635 - 1210655 + g 72 -13.3 -3.17075 | CGGGATGCCGCAGGT GTGGTGGCA GTA TGCCACCGC TTCGCTTGCCCGCGC Rmet_1112 1212802 - 1210949 - | IucA/IucC Rmet_1113 1214634 - 1212808 - | IucA/IucC TERM 889 1214543 - 1214509 - G 86 -9.4 -4.57569 | gap 1 GTAGGTGTTGAAAAA CTGTTCGATCAGGTG CCGCTC CACCGGATCG-ACAG ATGGGGTTGTCGCGG Rmet_1114 1215808 - 1214621 - | major facilitator transporter Rmet_1115 1217580 - 1215811 - | IucA/IucC Rmet_1116 1218644 - 1217577 - | ornithine cyclodeaminase Rmet_1117 1219666 - 1218641 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Rmet_1118 1222285 - 1219766 - | TonB-dependent siderophore receptor Rmet_1119 1223451 - 1222378 - | putative FecR Rmet_1120 1224015 - 1223515 - | sigma-24 (FecI-like) TERM 890 1224132 - 1224085 - R 74 -12.8 -3.16564 | gap 1, opp_overlap 1224084 1224085 TTTGTAGGTGATGAA GGCGTCAACCGCGACATGCAA TGCGCGG CTGCATGTCGCGGATG-CGGC GGTTGTGGCTTGTGC Rmet_1121 1227289 - 1224155 - | hydrophobe/amphiphile efflux-1 HAE1 Rmet_1122 1227739 - 1229031 + | sodium:dicarboxylate symporter Rmet_1123 1229036 - 1229947 + | extracellular solute-binding protein Rmet_1124 1230083 - 1232416 + | oxidoreductase alpha (molybdopterin) subunit TERM 891 1232910 - 1232870 - g 70 -13.9 -2.55213 | overlap 1232866 GACGGATTGAACCGA CGCCTGCGATGCTCCGTCG CGC CACCGACGCATTGCAGGCG CGACAGGTGCTGATG TERM 892 1233042 - 1233068 + G 79 -6.4 -4.49981 | GATCGGCCATCTGAC CCGTACCCGCAC GAC GTTCGGCGACGG TTTTGTCCTGCTGTC Rmet_1125 1232431 - 1233303 + | formate dehydrogenase family accessory protein FdhD TERM 893 1234502 - 1234516 + G 73 -9.2 -3.90744 | GCCAACATCATGGCG GCGGCG GTG CGTCGC TTCTTTCCGCAGGGC Rmet_1126 1233359 - 1234786 + | GntR family transcriptional regulator Rmet_1127 1234783 - 1235076 + | putative DNA-binding protein Rmet_1128 1236535 - 1235111 - | FAD linked oxidase-like protein Rmet_1129 1236981 - 1236541 - | putative transmembrane protein Rmet_1130 1237607 - 1236978 - | flavodoxin/nitric oxide synthase TERM 894 1238119 - 1238148 + G 71 -9.9 -3.68886 | overlap 1238120 TCTGGGCCGTGCTGA CGCTCGGGCCGGT GCTG ATCGGCGCGAGCC TTTCCGTCAGTTCGT TERM 895 1238310 - 1238341 + G 71 -7.9 -4.13767 | overlap 1238303 GTGGAGTGGCGCGAT GCGATTGTCGCCG GCATCG TGGCGGCCGTCGC TTTTGAAGTGGCCAA Rmet_1131 1237665 - 1239008 + | tRNA-processing RNAse BN Rmet_1132 1239464 - 1239147 - | putative transmembrane protein Rmet_1133 1240313 - 1239498 - | alpha/beta hydrolase fold Rmet_1134 1241665 - 1240313 - | O-acetylhomoserine aminocarboxypropyltransferase TERM 896 1241640 - 1241623 - G 89 -12.7 -4.13014 | CGGACATGGTGAAAA GGCTCGG TTTG CCGAGCC ATGGGTGGTTGTCTC Rmet_1135 1241845 - 1242300 + | signal-transduction protein Rmet_1136 1242392 - 1244296 + | phospholipid/glycerol acyltransferase TERM 897 1244431 - 1244405 - g 71 -13.6 -2.78384 | GCCTGCCGTACCAGA CCGCGCGCGGCA ACC TGCGGCGCGCGC CCAAGGGCAAGCTGC Rmet_1137 1244299 - 1245072 + | putative glutathione S-transferase Rmet_1138 1245129 - 1246238 + | chorismate synthase Rmet_1139 1246322 - 1247419 + | major facilitator transporter Rmet_1140 1248608 - 1247502 - | FAD dependent oxidoreductase TERM 898 1248034 - 1248008 - G 70 -13.7 -2.52464 | GCCCCGCCGAATTGA CGACCGTGCGG GCGAG CAGCACGGTCG ATCCATCATCGCTAC Rmet_1141 1249343 - 1248642 - | GntR family transcriptional regulator TERM 899 1248997 - 1249027 + g 71 -10.4 -3.59979 | gap 1, overlap 1248995 1249016 AGATCGACATCGGTG CGGCGTGCGGCCG CCATTT CGG-CGCACGCGG TTTCCACTACGCGCC Rmet_1142 1249585 - 1250550 + | type IV pilus assembly PilZ Rmet_1143 1251129 - 1252727 + | hypothetical protein Rmet_1144 1252724 - 1253416 + | DMSO-membrane protein Rmet_1145 1253406 - 1255883 + | molybdopterin guanine dinucleotide-containing S/N-oxide reductase TERM 900 1255917 - 1255947 + T 95 -19.8 -3.41602 | opp_overlap 1255918 1255923, overlap 1255918 1255923 GAAGGTTCGCCCAAT AGAAAACGCCGGCC ATT GGCCGGCGTTTTCC TTGTCCTGCAATGCC TERM 901 1255918 - 1255946 + T 100 -23.3 -2.64747 | opp_overlap 1255918 1255923, overlap 1255917 1255923 AAGGTTCGCCCAATA GAAAACGCCGGCC ATT GGCCGGCGTTTTC CTTGTCCTGCAATGC TERM 902 1255946 - 1255918 - T 100 -23.3 -3.02043 | opp_overlap 1255918 1255917 1255923, overlap 1255923 AAGGTTCGCCCAATA GAAAACGCCGGCC ATT GGCCGGCGTTTTC CTTGTCCTGCAATGC TERM 903 1255923 - 1255941 + T 100 -17.4 -4.51174 | opp_overlap 1255923 1255918, overlap 1255918 1255917 TCGCCCAATAGAAAA CGCCGGCC ATT GGCCGGCG TTTTCCTTGTCCTGC TERM 904 1255941 - 1255923 - T 100 -17.4 -4.66537 | opp_overlap 1255918 1255917 1255923, overlap 1255918 TCGCCCAATAGAAAA CGCCGGCC ATT GGCCGGCG TTTTCCTTGTCCTGC Rmet_1146 1257676 - 1255991 - | electron transfer flavoprotein-ubiquinone oxidoreductase TERM 905 1256210 - 1256246 + g 75 -3.5 -4.75219 | overlap 1256210 1256213 GTTGATGTTCACCGG CACGTTCGCGTCCTTGA GCG TCAGGTGCGCGGGCTGG TTTTCTTCGTGGTTC TERM 906 1257906 - 1257917 + H 100 -4.4 -5.86061 | GCAAGATTTTTTTTT GAAC GACC GTTC TTTTTTTTGGTAAGC TERM 907 1258360 - 1258370 + G 72 -8.2 -4.06419 | opp_overlap 1258358 1258360, overlap 1258359 TCTTCGATACCAATA CGCG GGG CGCG TTCTTTGTCGCCCAG TERM 908 1258451 - 1258431 - g 71 -4 -4.57341 | gap 1, opp_overlap 1258432, overlap 1258432 1258433 AAGGGCGCCGAAAAA CT-GGGCAA TCCG CTGCCCCAG GCGCGAATCGTCAAT Rmet_1147 1258008 - 1258793 + | short chain dehydrogenase TERM 909 1259012 - 1258986 - g 80 -12.2 -3.71998 | opp_overlap 1258989 1258997, overlap 1258989 GATGGAGCAAGACAA TCAGGCACGGCG CGA CGCCGTGCCGCA GCATGTCGTCGATTC TERM 910 1259009 - 1258989 - g 89 -18.3 -2.95751 | opp_overlap 1258989 1258997, overlap 1258986 GGAGCAAGACAATCA GGCACGGCG CGA CGCCGTGCC GCAGCATGTCGTCGA Rmet_1148 1258972 - 1259562 + | tripartite ATP-independent periplasmic transporter DctQ Rmet_1149 1259559 - 1260863 + | TRAP dicarboxylate transporter- DctM subunit Rmet_1150 1260898 - 1261929 + | TRAP dicarboxylate transporter, DctP subunit Rmet_1151 1261926 - 1262327 + | thioesterase superfamily protein Rmet_1152 1262932 - 1262387 - | LuxR family transcriptional regulator Rmet_1153 1263128 - 1263826 + | 3-oxoacid CoA-transferase, subunit A Rmet_1154 1263838 - 1264476 + | butyryl-CoA:acetate CoA transferase TERM 911 1264560 - 1264533 - T 100 -21.3 -4.28488 | opp_overlap 1264533 AGCCAAATAGAGAAA GCCCCCGCCGG TTCATG CCGGCGGGGGC TTTTTTCTTGGCGAG TERM 912 1264533 - 1264560 + T 100 -22 -5.4505 | opp_overlap 1264533 AGCCAAATAGAGAAA GCCCCCGCCGGT TCAT GCCGGCGGGGGC TTTTTTCTTGGCGAG Rmet_1155 1265083 - 1264610 - | hypothetical protein Rmet_1156 1265880 - 1265104 - | 3-hydroxybutyrate dehydrogenase Rmet_1157 1266068 - 1266949 + | alpha/beta hydrolase fold Rmet_1158 1266975 - 1267337 + | endoribonuclease L-PSP TERM 913 1269135 - 1269113 - g 72 -11.3 -3.44284 | gap 1, opp_overlap 1269114 1269115, overlap 1269111 1269114 CCGTTACCAAGAAGA GTCGCGCCAC CAGC GTGGCGCG-C GGCGCCAAGAGTGGC Rmet_1159 1267354 - 1269582 + | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA TERM 914 1269819 - 1269783 - f 91 -13.2 -3.72742 | gap 1, overlap 1269814 TCATGAGCAAGACAA CTCGAACTACTACCGCT GGTT AGCGACAGTAG-TCGAG GTGCGCCTTCGACCC TERM 915 1269887 - 1269860 - f 74 -12.8 -3.25472 | opp_overlap 1269866, overlap 1269866 ATACGGGGAAACACA GAAAAACGCGGC CTTG GCCGCGTTTTTT TTCGTCTGTCGTTTT TERM 916 1269866 - 1269881 + F 100 -11.8 -5.92337 | opp_overlap 1269860 1269866 GGAAACACAGAAAAA CGCGGC CTTG GCCGCG TTTTTTTTCGTCTGT TERM 917 1269881 - 1269866 - f 100 -11.8 -5.14985 | opp_overlap 1269866, overlap 1269860 GGAAACACAGAAAAA CGCGGC CTTG GCCGCG TTTTTTTTCGTCTGT TERM 918 1270024 - 1270012 - f 71 -5.5 -4.36914 | GCCGGCGCCACAAAA GAAGC TAT GCTCC GCTCGCCACATCGCC thrS 1270077 - 1271984 + | threonyl-tRNA synthetase TERM 919 1271989 - 1272000 + F 77 -3.6 -4.94703 | overlap 1271991 GCAAAGCCTGAGGGT GTCG AGCA CGGC TTGTTTTTTTGTCTT TERM 920 1271991 - 1272003 + F 100 -5.5 -5.86465 | overlap 1271989 AAAGCCTGAGGGTGT CGAGC ACG GCTTG TTTTTTTGTCTTCTT Rmet_1161 1272089 - 1272553 + | translation initiation factor 3 TERM 921 1272760 - 1272747 - g 82 -5.9 -4.78753 | opp_overlap 1272747, overlap 1272742 TGAAGACCAAGAAAA GCGCC TCCA AGCGC TTTACTGCGCGCCCG rpmI 1272722 - 1272919 + | 50S ribosomal protein L35 TERM 922 1273125 - 1273109 - g 75 -9.3 -3.9461 | opp_overlap 1273107 TCGTCGCAACAAGAA GCGCGTG TTC CGCGCGC TCTGGATTGCACGTA rplT 1272948 - 1273304 + | 50S ribosomal protein L20 TERM 923 1273390 - 1273369 - f 79 -13 -3.53761 | opp_overlap 1273369 CAAGGTCTGCTGAAA CGGGGCTC CTCACC GAGCCCCG TTTTTATTTCGAATG TERM 924 1273369 - 1273390 + F 100 -13 -5.28942 | opp_overlap 1273369 CAAGGTCTGCTGAAA CGGGGCTC CTCACC GAGCCCCG TTTTTATTTCGAATG pheS 1273513 - 1274544 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1274622 - 1277069 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1277154 - 1277564 + | integration host factor subunit alpha Rmet_1167 1277744 - 1278178 + | MerR family transcriptional regulator TERM 925 1278351 - 1278317 - f 100 -15.8 -4.46212 | opp_overlap 1278322, overlap 1278322 GCCCCGACCAGAAAA TGAAAGGCCTGACAGG TTT CCTGTCAGGCCTTTTT GTCATTTGTTGCTGT TERM 926 1278322 - 1278346 + F 100 -20.1 -5.0809 | opp_overlap 1278317 1278322 GACCAGAAAATGAAA GGCCTGACAGG TTT CCTGTCAGGCC TTTTTGTCATTTGTT TERM 927 1278346 - 1278322 - f 100 -20.1 -4.28487 | opp_overlap 1278322, overlap 1278317 GACCAGAAAATGAAA GGCCTGACAGG TTT CCTGTCAGGCC TTTTTGTCATTTGTT TERM 928 1278799 - 1278812 + G 78 -8.1 -4.45577 | overlap 1278764 CGATGAGGTCAGTCT TGGCG ATGG CGCCA TTTTCTGCGATTTCT Rmet_1168 1278473 - 1279126 + | putative acetyl transferase protein TERM 929 1279262 - 1279306 + T 100 -32.5 -3.97088 | opp_overlap 1279266 1279272, overlap 1279266 CTCTTACCCCAGATG GAAAGCGAAAGGCCTGACGGG AAA CCTGTCAGGCCTTTCGCTTTC TTTCATCTTGTAACG TERM 930 1279266 - 1279302 + T 100 -27.5 -4.57787 | opp_overlap 1279266 1279272, overlap 1279262 TACCCCAGATGGAAA GCGAAAGGCCTGACGGG AAA CCTGTCAGGCCTTTCGC TTTCTTTCATCTTGT TERM 931 1279302 - 1279266 - T 100 -25.3 -3.71378 | opp_overlap 1279266 1279262, overlap 1279272 TACCCCAGATGGAAA GCGAAAGGCCTGACGGG AAA CCTGTCAGGCCTTTCGC TTTCTTTCATCTTGT TERM 932 1279296 - 1279272 - T 95 -15.7 -3.86311 | opp_overlap 1279266 1279262, overlap 1279266 AGATGGAAAGCGAAA GGCCTGACGGG AAA CCTGTCAGGCC TTTCGCTTTCTTTCA Rmet_1169 1280306 - 1279575 - | peptide methionine sulfoxide reductase TERM 933 1280139 - 1280150 + g 74 -2.2 -4.72272 | gap 1, overlap 1280132 1280131 1280138 CGCGGTCTCGGTATG GCTCG TGC CG-GC TTTTTCGTCGACGGC Rmet_1170 1282124 - 1280334 - | cytochrome c biogenesis protein, transmembrane region Rmet_1171 1282324 - 1283424 + | IS4 family transposase Rmet_1172 1284022 - 1283552 - | twin-arginine translocation pathway signal Rmet_1173 1284117 - 1284917 + | two component transcriptional regulator TERM 934 1285653 - 1285615 - gT 77 -13.1 -3.32698 | gap 1, opp_overlap 1285636, overlap 1285613 1285635 CGACCGGATACAAGA GCCG-ATGCAGCGCGACG AGAT CGCCGCGCTACGCACGGC GTTCCGTCAGATGGC Rmet_1175 1287248 - 1286349 - | LysR family transcriptional regulator Rmet_1174 1284914 - 1286428 + | periplasmic sensor signal transduction histidine kinase Rmet_1176 1287368 - 1288645 + | enolase Rmet_1177 1288910 - 1288650 - | hypothetical protein Rmet_1178 1288971 - 1289528 + | hypothetical protein TERM 935 1289654 - 1289667 + G 75 -4.5 -4.65895 | gap 1, opp_overlap 1289654, overlap 1289654 1289655 GGATATCCACAACGA G-GGGC AGG GCCCGC TTTTTCGCTGCCCGC Rmet_1179 1289586 - 1289825 + | hypothetical protein Rmet_1180 1289895 - 1290290 + | hypothetical protein Rmet_1181 1295183 - 1290312 - | glutamate dehydrogenase (NAD) TERM 936 1295281 - 1295261 - R 100 -15.4 -4.51238 | GTGACAAAACAGAAA CGCCCCGC GCGGG GCGGGGCG TCATGGCTGCGGTGC Rmet_1182 1295825 - 1295304 - | hypothetical protein TERM 937 1296221 - 1296192 - R 100 -17.9 -4.21607 | GGGAGGGAAGAGAAA CATGGCCCCCGCC TGAG AACGGGGGCCATG AAGGACGACGCTTAC Rmet_1183 1296571 - 1296233 - | putative signal peptide protein Rmet_1184 1297816 - 1296746 - | hypothetical protein TERM 938 1297503 - 1297520 + g 72 -8.3 -4.07687 | overlap 1297499 TCGGCGCCGATCGCG CCGCCGC CGCC GCCGCGG TTTTCCACCACCACT TERM 939 1297935 - 1297970 + H 85 -17.8 -2.55544 | opp_overlap 1297940, overlap 1297940 GCGGGAGCGCCAATG CAAAAGGCCGAAAGCA ATGC TGCTTTCGGCCTTTTC TGAATTCGCTGGTGG TERM 940 1297965 - 1297940 - H 100 -17.7 -4.27584 | opp_overlap 1297935 1297940 AGCGCCAATGCAAAA GGCCGAAAGCA ATGC TGCTTTCGGCC TTTTCTGAATTCGCT TERM 941 1297940 - 1297965 + H 100 -17.7 -4.47551 | opp_overlap 1297940, overlap 1297935 AGCGCCAATGCAAAA GGCCGAAAGCA ATGC TGCTTTCGGCC TTTTCTGAATTCGCT Rmet_1185 1298144 - 1299076 + | LysR family transcriptional regulator Rmet_1186 1299192 - 1300595 + | hydroxydechloroatrazine ethylaminohydrolase TERM 942 1300785 - 1300750 - f 88 -19.2 -2.87586 | opp_overlap 1300755, overlap 1300755 ACCAAGCCACCAAAG CAAAAGGCCGGAAGCA TTGC TGCTTCCGGCCTTTTT GGTGTCTGGTGGGGC TERM 943 1300780 - 1300755 - f 100 -19.1 -4.58773 | opp_overlap 1300755, overlap 1300750 GCCACCAAAGCAAAA GGCCGGAAGCA TTGC TGCTTCCGGCC TTTTTGGTGTCTGGT TERM 944 1300755 - 1300780 + F 100 -19.1 -4.85129 | opp_overlap 1300750 1300755 GCCACCAAAGCAAAA GGCCGGAAGCA TTGC TGCTTCCGGCC TTTTTGGTGTCTGGT Rmet_1187 1301114 - 1301380 + | hypothetical protein Rmet_1188 1303311 - 1301500 - | sulphate transporter TERM 945 1302441 - 1302394 - G 75 -3.2 -4.84359 | gap 1, overlap 1302382 1302395 GTAGCCGGAGAAAAA TCCGCCCGCGATATTCGACAGCC CCT GGCCGATGAAC-TCGCGGTTGGC GTCGATGTGCTGGCC Rmet_1189 1304112 - 1303315 - | exodeoxyribonuclease III Rmet_1190 1304564 - 1304109 - | hypothetical protein TERM 946 1304423 - 1304436 + g 87 -3.7 -5.1244 | TGGCAACGTTCTCCA GCCGG TCCA CCAGC TTTTTCTCTTCCTGC Rmet_1191 1306705 - 1304603 - | oligopeptidase A TERM 947 1304726 - 1304688 - G 70 -13.8 -2.50994 | overlap 1304687 1304690 CGGAACGCCACGAAC GATTCCATCGCCGGGCGG CTA CCGCCCACCGACAGGATC TCGCGGCGATAACGC Rmet_1192 1307696 - 1306839 - | methenyltetrahydrofolate cyclohydrolase TERM 948 1307767 - 1307728 - H 79 -12.1 -3.53563 | gap 1, opp_overlap 1307719, overlap 1307729 AGAGGCTTGGGGAAA CGGGGAGCGACGCCGGCG GGGGT CGCCAGCGTCGCTCGT-G AAACCCGGATTATAA TERM 949 1308212 - 1308252 + G 71 -11.8 -3.18264 | gap 1 ATATCGCCTGGGTGT CCCTGGCGCCGCGCTTCAT CTGG ATGGCG-GCGGCTCCGGGG TTGCTGACTGCCGGG Rmet_1193 1307866 - 1308561 + | hypothetical protein Rmet_1194 1309291 - 1308659 - | two component LuxR family transcriptional regulator Rmet_1195 1312041 - 1309429 - | PAS/PAC sensor signal transduction histidine kinase aceE 1312479 - 1315166 + | pyruvate dehydrogenase subunit E1 TERM 950 1315221 - 1315188 - f 76 -13.7 -3.09635 | ACTTGCACGACTGAA CCCCCGCAGCGCGGC ACCC GCCGCGCCGCAGTGT GCCACCGGCTGACCC TERM 951 1315272 - 1315321 + F 84 -11.4 -4.04318 | overlap 1315302 GGTGATGCGCGGCAG CGTGACAGATGCGTGTGGCGAG AGTAAC CTCGCCGATTGCGTTTGTCGCG TTTGTCGTATCTGGC Rmet_1197 1315368 - 1317032 + | dihydrolipoamide acetyltransferase Rmet_1198 1317096 - 1317692 + | 20S proteasome, A and B subunits Rmet_1199 1317732 - 1319510 + | dihydrolipoamide dehydrogenase TERM 952 1319550 - 1319534 - T 90 -15.1 -3.51924 | opp_overlap 1319534 GCCGTAGTGAGAGAA CCCGCCG ATT CGGCGGG TTTTTTTGTCTCGAC TERM 953 1319534 - 1319550 + T 100 -15.1 -5.71712 | opp_overlap 1319534 GCCGTAGTGAGAGAA CCCGCCG ATT CGGCGGG TTTTTTTGTCTCGAC TERM 954 1319633 - 1319605 - T 100 -21.8 -5.52986 | opp_overlap 1319597 ACGCGACGAAAAAAA GCCCGGCCTCTG GTGGT CAGAGGCCGGGC TTGAACGATACCTTT TERM 955 1319710 - 1319729 + T 100 -16.4 -4.07568 | opp_overlap 1319710 CCTCCGTTGGCAAAA CGCCCCGC GTGG GCGGGGCG TTTTGCCAACGGACC TERM 956 1319729 - 1319710 - T 100 -16.4 -4.07568 | opp_overlap 1319710 CCTCCGTTGGCAAAA CGCCCCGC GTGG GCGGGGCG TTTTGCCAACGGACC TERM 957 1319735 - 1319764 + T 76 -13.5 -3.05268 | opp_overlap 1319743, overlap 1319739 GGGCGGGGCGTTTTG CCAACGGACCGGC CAGA GCCGGCGCGTTGG TATTACAGATGCTTA Rmet_1200 1320355 - 1319777 - | phasin TERM 958 1320069 - 1320090 + g 77 -10.9 -3.73775 | GCAACCTTGGTGAAC TCGCTTTGG GTTT CCGAAGCGA TTTCGTACAGGTGAC Rmet_1201 1320742 - 1321713 + | histone deacetylase superfamily protein Rmet_1202 1321739 - 1322266 + | thioesterase superfamily protein TERM 959 1322790 - 1322832 + G 81 -12.7 -3.57561 | gap 2 GCAAAGCATCATGGT GGCGG-C-GCGCGCACGTGAC CTG GATACGTGCCCGCAGGCCGCC TTTACGCAGTTCCAC Rmet_1203 1322299 - 1322994 + | nitroreductase TERM 960 1323123 - 1323143 + F 78 -7.5 -4.66833 | opp_overlap 1323125 1323128 GTGATGCCGGTTACA CAGCAGCCG ACC CAGCTGTTG TTTTTGGAGTTGCGG TERM 961 1323488 - 1323474 - g 75 -7.1 -4.34771 | overlap 1323485 CAAAATCCACTAAAA CCACC AAAAA GGTGG CTTCCGCGAAGGCGG Rmet_1204 1323302 - 1324483 + | murein-DD-endopeptidase TERM 962 1324550 - 1324521 - T 100 -24.3 -5.18726 | opp_overlap 1324521 GCCGTACAAGAAAAA CGCGCCGCCGGGC GAAA ACCCGGCGGCGCG TTTTTTGTTTGCCTC TERM 963 1324521 - 1324550 + T 100 -23.6 -5.65927 | opp_overlap 1324521 GCCGTACAAGAAAAA CGCGCCGCCGGG CGAAAA CCCGGCGGCGCG TTTTTTGTTTGCCTC Rmet_1205 1325367 - 1324582 - | IclR family transcriptional regulator TERM 964 1326116 - 1326138 + G 70 -11.2 -3.36327 | opp_overlap 1326106 TGAAGGACTGCGAGG CGTGCTGCGG ATT CGGCGGCACG TTCTCGGTCAAGTAC Rmet_1206 1325608 - 1326333 + | protein of unknown function DUF224, cysteine-rich region Rmet_1207 1326356 - 1327768 + | Iron-sulfur cluster binding protein Rmet_1208 1327765 - 1328031 + | hypothetical protein TERM 965 1328042 - 1328086 + T 100 -16.6 -3.53012 | gap 2, opp_overlap 1328029 1328049, overlap 1328044 TATAAGGCACTGCCA CAGGTAAGCTCCCCT--CCCGC AAT GCGGGTGAGGGGAGCTTGCCTA TTTACCCCAGCAGCA TERM 966 1328044 - 1328084 + T 95 -19.2 -3.34398 | gap 2, opp_overlap 1328049, overlap 1328042 TAAGGCACTGCCACA GGTAAGCTCCCCT--CCCGC AAT GCGGGTGAGGGGAGCTTGCC TATTTACCCCAGCAG TERM 967 1328079 - 1328049 - T 78 -14.1 -3.12668 | gap 2, opp_overlap 1328044 1328042 CACTGCCACAGGTAA GCTCCCCT--CCCGC AAT GCGGGTGAGGGGAGC TTGCCTATTTACCCC Rmet_1209 1328882 - 1328088 - | ABC transporter-related protein TERM 968 1328812 - 1328826 + g 77 -12.8 -3.35996 | ATCTCCAGGCTCAGG CCGCGC AGG GCGCGG TTCTCGATCGGGGTG Rmet_1210 1329780 - 1328884 - | inner-membrane translocator Rmet_1211 1330854 - 1329883 - | hypothetical protein TERM 969 1331137 - 1331119 - R 74 -6 -4.57073 | TATCCTGCTGAAAAA CACCTC TACTGGG GAGGTG CACCGCAAATTATTG Rmet_1212 1332205 - 1331147 - | aldo/keto reductase TERM 970 1331815 - 1331797 - G 81 -11.6 -4.07568 | overlap 1331798 GCTTCTGGCCGAAAA TCGGCGCG TTA CGCGCCGG CCAATGAATCTGGTA TERM 971 1331814 - 1331798 - G 80 -15.1 -3.04398 | overlap 1331797 CTTCTGGCCGAAAAT CGGCGCG TTA CGCGCCG GCCAATGAATCTGGT Rmet_1213 1333327 - 1332251 - | dihydroorotate dehydrogenase 2 TERM 972 1333307 - 1333355 + g 74 -2.2 -4.72272 | gap 1, opp_overlap 1333328, overlap 1333309 GGGGCGCGGCCAGGG CCGGCG-AGGAGTCGGAACCAAG GCGG CATTGTAGCGCCTCCTGCGCCCG TTTTTACTCCAGGGC Rmet_1214 1334147 - 1333359 - | arginyl-tRNA-protein transferase Rmet_1215 1334325 - 1334789 + | hypothetical protein aat 1335654 - 1334905 - | leucyl/phenylalanyl-tRNA--protein transferase Rmet_1217 1336298 - 1335714 - | NUDIX hydrolase TERM 973 1336436 - 1336407 - R 82 -12.9 -3.59979 | opp_overlap 1336414 1336434, overlap 1336414 GCGCGCCATGGCAAA CAAAAAACCCGCC AATA GGCGGGTTTGCTG TGCGACGGTCGGTTG TERM 974 1336414 - 1336429 + r 80 -11.8 -3.83026 | opp_overlap 1336407 1336414 ATGGCAAACAAAAAA CCCGCC AATA GGCGGG TTTGCTGTGCGACGG TERM 975 1336429 - 1336414 - R 100 -11.8 -5.64421 | opp_overlap 1336414, overlap 1336407 ATGGCAAACAAAAAA CCCGCC AATA GGCGGG TTTGCTGTGCGACGG Rmet_1218 1337310 - 1336648 - | hypothetical protein Rmet_1219 1337761 - 1337372 - | hypothetical protein Rmet_1220 1339114 - 1337867 - | benzoyl-CoA oxygenase, component A Rmet_1221 1340565 - 1339141 - | benzoyl-CoA oxygenase, component B TERM 976 1339196 - 1339171 - G 71 -14 -2.71497 | overlap 1339170 1339166 GTACTCGAAATCAAT CGGCTGGCGG TTGATG CCACCAGCCG GCGGCGCGATCCAGT Rmet_1222 1342283 - 1340607 - | enoyl-CoA hydratase Rmet_1223 1343354 - 1342404 - | anaerobic benzoate catabolism transcriptional regulator TERM 977 1344170 - 1344126 - g 81 -15.6 -3.03159 | gap 1 CCAAGGCGGCCAATA CGGTCAGCGCCA-TGGCGGCG AGCG CGCCGCCGTTGGCGCAATCCG TCGCAACCGGGCCCG Rmet_1224 1343603 - 1345252 + | benzoate-CoA ligase Rmet_1225 1345254 - 1346069 + | alpha/beta hydrolase fold TERM 978 1346112 - 1346067 - f 74 -4.1 -4.79451 | gap 3, opp_overlap 1346069, overlap 1346070 1346111 ACTTCAAATATAAAA TAATTGG-CC-CGG-ACGGCAG GAACG CTGCCGTACCGCGGGCCAAATG GCTTGAAACCAAAGG TERM 979 1346109 - 1346070 - f 89 -10.2 -4.49132 | gap 3, opp_overlap 1346069, overlap 1346067 TCAAATATAAAATAA TTGG-CC-CGG-ACGGCAG GAACG CTGCCGTACCGCGGGCCAA ATGGCTTGAAACCAA Rmet_1226 1346155 - 1347348 + | extracellular ligand-binding receptor Rmet_1227 1347374 - 1348240 + | inner-membrane translocator Rmet_1228 1348256 - 1349320 + | inner-membrane translocator Rmet_1229 1349317 - 1350084 + | ABC transporter-related protein Rmet_1230 1350081 - 1350797 + | ABC transporter-related protein TERM 980 1350808 - 1350830 + F 79 -12.6 -3.45054 | overlap 1350826 1350827 1350828 TTTGATTTCCAGATT CGGCGGCCCG CCA TGGGGCGCCG TTGTGGCTTGTCCGC Rmet_1231 1351097 - 1353067 + | K+ potassium transporter TERM 981 1353091 - 1353110 + T 100 -16.4 -5.45813 | opp_overlap 1353091 GTCCAGATGTGACAA CGCCCCGC AATT GCGGGGCG TTTTGTTTTTTCCTC TERM 982 1353110 - 1353091 - T 89 -16.4 -3.34962 | opp_overlap 1353091 GTCCAGATGTGACAA CGCCCCGC AATT GCGGGGCG TTTTGTTTTTTCCTC Rmet_1232 1355523 - 1353160 - | RNA binding S1 TERM 983 1353592 - 1353616 + g 76 -9.1 -4.19238 | overlap 1353593 CGTCGCGGTCTTGAA CTCGGGGCGCG GGT CGCGGCCCGGC TTTTCGAGTTCGGAC Rmet_1233 1355701 - 1356477 + | hypothetical protein Rmet_1234 1356502 - 1356738 + | hypothetical protein TERM 984 1356801 - 1356777 - f 100 -12.2 -4.46212 | gap 1 GGCGCCATGACAAAA GCGT-GCGCGA CCAA TCGCGCCACGC CTCAGGAAGTTCCAA Rmet_1235 1356779 - 1359010 + | helicase c2 TERM 985 1359242 - 1359260 + F 100 -11.7 -5.95539 | opp_overlap 1359242 TCAGGCCAAAAAAAA CCGCACG GATCG CGTGCGG TTTTTTTGTTTCACG TERM 986 1359260 - 1359242 - f 100 -11.7 -5.78622 | opp_overlap 1359242 TCAGGCCAAAAAAAA CCGCACG GATCG CGTGCGG TTTTTTTGTTTCACG Rmet_1236 1359445 - 1360644 + | phage integrase TERM 987 1360982 - 1360960 - g 73 -13.6 -2.82516 | TTCCCGACGAGCAGA TTCTCGTATC ACT GATACGAGAA TTGAGCTGGACGCAC Rmet_1237 1360641 - 1361717 + | hypothetical protein TERM 988 1361894 - 1361875 - f 71 -7.8 -4.07568 | CTCCGCTTGCCAAAA GCCGACTG TGTG CAGTGGGC GGGTGTGGGCGGTCT TERM 989 1362413 - 1362444 + G 78 -13.2 -3.52481 | opp_overlap 1362399 1362440, overlap 1362427 1362430 1362440 AGCGGCGGTCATCGT CGCCCATTATGT TCCGCGCC ACATAATGGGCG TTATGTGCCCTGTTT TERM 990 1362427 - 1362456 + G 74 -2.1 -4.84311 | opp_overlap 1362440, overlap 1362413 1362430 1362440 TCGCCCATTATGTTC CGCGCCACATAAT GGGC GTTATGTGCCCTG TTTTCTTATGTGCCC Rmet_1238 1362069 - 1362485 + | DNA repair protein RadC Rmet_1239 1362583 - 1363842 + | phage integrase TERM 991 1364263 - 1364277 + G 72 -2.8 -4.63527 | overlap 1364261 CACCACAGCGCGGCA TCACCT ACG AGATGA TTTTTGCACTGCTCG Rmet_1240 1363839 - 1364831 + | phage integrase Rmet_1241 1364828 - 1365838 + | phage integrase Rmet_1242 1366076 - 1366186 + | RadC family protein TERM 992 1366192 - 1366207 + F 95 -11.8 -4.72272 | CCTGCTTTGACCTTT GGGGGC TTCG GCCCCC TTTTTGCTGCGCCCG Rmet_1243 1366465 - 1366857 + | hypothetical protein TERM 993 1366876 - 1366905 + F 100 -19.3 -5.67063 | CGCCGTACAGCCTTC GGTGCGTCGTCCC TGCG GGGGCGGCGCACC TTTTTTTCTGCTGCG TERM 994 1367058 - 1367025 - f 74 -10.9 -3.53012 | gap 1, overlap 1367027 1367028 TTGGCGCCCCTCAAA GACC-GCCGAACCGGC TGC GCCGGATCGGCCAGAC CACGGCAATCGCTGT TERM 995 1367055 - 1367027 - f 76 -12.3 -3.34398 | overlap 1367025 1367028 GGCGCCCCTCAAAGA CCGCCGAACCGGC TGC GCCGGATCGGCCA GACCACGGCAATCGC TERM 996 1367054 - 1367028 - f 72 -13.6 -2.60496 | overlap 1367027 1367025 GCGCCCCTCAAAGAC CGCCGAACCGGC TGC GCCGGATCGGCC AGACCACGGCAATCG TERM 997 1367845 - 1367816 - g 75 -13.7 -2.95789 | gap 1, overlap 1367811 ACTACACCAAGCACA TGATCCGGCT-GCG CCA CGCCAGCCAGATCA ACGGCCGCGAGGCCA Rmet_1244 1367566 - 1368390 + | hypothetical protein TERM 998 1368399 - 1368428 + F 100 -17.1 -3.52896 | AGCCTGAATCCCCAC GCGGCAGGGGCAG GCAG CAGCCCTTGCCGC TTATCTCGCTGCTGC Rmet_1245 1368469 - 1370520 + | ParB family protein TERM 999 1370533 - 1370565 + T 100 -17.1 -4.08706 | gap 1, opp_overlap 1370501 1370497 1370537 TGACCCGCGCCGAAG GC-AAGCGCCCCGG CCTCGA CCGGGGCGCTTCGC TTTGTGTGGTGGCGC TERM 1000 1370560 - 1370537 - T 89 -17.4 -3.17075 | opp_overlap 1370533, overlap 1370501 1370497 CCGCGCCGAAGGCAA GCGCCCCGGC CTCG ACCGGGGCGC TTCGCTTTGTGTGGT TERM 1001 1370650 - 1370599 - T 100 -20.3 -3.84915 | gap 3, overlap 1370600 GAGACGAAGGAATAA CCGCGATCAGCACCGCGCCCAGGCCG TTC CGCCCTGGGCGCGGTG--GA-CGCGA AATCCGGGTGCGACA TERM 1002 1370649 - 1370600 - T 100 -21.6 -2.90226 | gap 3, overlap 1370599 AGACGAAGGAATAAC CGCGATCAGCACCGCGCCCAGGCCG TTC CGCCCTGGGCGCGGTG--GA-CGCG AAATCCGGGTGCGAC TERM 1003 1370680 - 1370653 - T 73 -10.4 -3.59979 | opp_overlap 1370654, overlap 1370654 GCGGTGGACGCGAAA TCCGGGTGCGAC AGTG GCCGCGCCCGGT GTTCAAGGCCAATAG TERM 1004 1370679 - 1370654 - T 73 -13.9 -2.75844 | opp_overlap 1370654, overlap 1370653 CGGTGGACGCGAAAT CCGGGTGCGAC AGTG GCCGCGCCCGG TGTTCAAGGCCAATA TERM 1005 1370654 - 1370679 + T 76 -13.9 -3.01924 | opp_overlap 1370654 1370653 CGGTGGACGCGAAAT CCGGGTGCGAC AGTG GCCGCGCCCGG TGTTCAAGGCCAATA TERM 1006 1370740 - 1370707 - T 100 -19.5 -3.52093 | opp_overlap 1370738 ATAGCCGAATCAGAA CGCCGCCGCCTTCGC GCTG GCTCAGGCGGCGGCG TTGAAGGCATCGCTG Rmet_1246 1371246 - 1370728 - | GCN5-related N-acetyltransferase TERM 1007 1370828 - 1370807 - G 80 -12.3 -3.73775 | gap 1, overlap 1370809 GCCAGCGCCATGAAA TAGCCGGGCG GCA CGCCCGGC-A GTTGCAAGCCCGCAT TERM 1008 1370827 - 1370809 - G 93 -17.4 -3.45324 | overlap 1370807 CAGCGCCATGAAATA GCCGGGCG GCA CGCCCGGC AGTTGCAAGCCCGCA TERM 1009 1371290 - 1371316 + H 77 -11.4 -3.57144 | opp_overlap 1371282 TATAGAACGGCCTGG GCGTGTCGGCGC ACT GCGCCGCCGGGC TTTCGGGCTGCGCCC Rmet_1248 1372035 - 1372388 + | hypothetical protein TERM 1010 1372389 - 1372430 + T 100 -17.2 -3.61517 | opp_overlap 1372373, overlap 1372390 1372392 CCCCAGGCGGCGTGA CCGCCGCAGCGCCCCGCC CATCGC GGCGGGGCGCTGTGCTGC TTGTTCGCAGCACAT TERM 1011 1372390 - 1372429 + T 95 -20.7 -2.76696 | opp_overlap 1372373, overlap 1372389 1372392 CCCAGGCGGCGTGAC CGCCGCAGCGCCCCGCC CATCGC GGCGGGGCGCTGTGCTG CTTGTTCGCAGCACA TERM 1012 1372392 - 1372427 + T 88 -19.7 -2.93073 | opp_overlap 1372373, overlap 1372390 1372389 CAGGCGGCGTGACCG CCGCAGCGCCCCGCC CATCGC GGCGGGGCGCTGTGC TGCTTGTTCGCAGCA TERM 1013 1372456 - 1372479 + T 89 -16 -3.33696 | gap 1, opp_overlap 1372448 CACATCACCACGTCA CGCG-CGCGGC TTC GCCGCGTCGCG TTCCTTCAACACCGC Rmet_1249 1372758 - 1372453 - | XRE family transcriptional regulator TERM 1014 1372926 - 1372899 - g 72 -13.4 -3.11732 | opp_overlap 1372905 1372909 1372923, overlap 1372894 1372890 1372922 GGCAAAGCCACGCAA GCGCATCGGTGC TTGC GCACCAAGGCGC AAATCCGGTTTCGCG Rmet_1250 1372771 - 1373352 + | putative lipoprotein Rmet_1251 1374580 - 1373579 - | integrase catalytic subunit Rmet_1252 1374596 - 1375468 + | hypothetical protein Rmet_1253 1375516 - 1375833 + | hypothetical protein TERM 1015 1376390 - 1376334 - g 73 -12.2 -3.39895 | gap 1, overlap 1376335 1376339 1376343 TCGTGGATCAACGAA TGGAAGGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCCTGCCG GACTGGTTCTATGCG TERM 1016 1376389 - 1376335 - g 77 -15.7 -2.63723 | gap 1, overlap 1376334 1376339 1376343 CGTGGATCAACGAAT GGAAGGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCCTGCC GGACTGGTTCTATGC TERM 1017 1376385 - 1376339 - g 78 -13.7 -3.24613 | gap 1, overlap 1376335 1376334 1376343 GATCAACGAATGGAA GGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCC TGCCGGACTGGTTCT TERM 1018 1376381 - 1376343 - g 70 -11.7 -3.41636 | gap 1, overlap 1376339 1376335 1376334 AACGAATGGAAGGAA CTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTG ATCCTGCCGGACTGG Rmet_1254 1375860 - 1376717 + | putative replication initiator and transcription repressor protein TERM 1019 1377024 - 1376998 - g 81 -11.6 -4.05446 | gap 1, overlap 1377014 1377017 CTGCTCAACCAGAAA GGCG-GCGTGG GCAAGA CCACGCTCGCC ACGCACATCGCCGGC Rmet_1255 1376971 - 1377609 + | cobyrinic acid a,c-diamide synthase TERM 1020 1377773 - 1377757 - g 74 -15.1 -2.62616 | TGACCCTCGACATCA CGCCCGC GAT GCGGGCG CGCATCAAGGTATCG Rmet_1256 1377606 - 1377878 + | hypothetical protein Rmet_1257 1377875 - 1378408 + | hypothetical protein Rmet_1258 1378405 - 1378992 + | TraF peptidase TERM 1021 1379287 - 1379265 - f 89 -10.5 -4.7033 | overlap 1379266 GAAGGCAAGACAAAA GGACGCGGC ACCGG GCCGCGTCG AAAGCCAGTCTGCAC TERM 1022 1379286 - 1379266 - f 81 -14 -3.41114 | overlap 1379265 AAGGCAAGACAAAAG GACGCGGC ACCGG GCCGCGTC GAAAGCCAGTCTGCA TERM 1023 1379406 - 1379372 - g 70 -13.7 -2.52464 | gap 2, opp_overlap 1379331 1379373 GCCCGCGCCAATGCA GGCATGTCC-G-CGTGC TTT GCACGACCGGACACGCC AGAGGTTGCAGAGGG TERM 1024 1380028 - 1380001 - g 80 -14.2 -3.42503 | gap 1 CTGGAACACCGACAA CCCGCACACGCAC ATC GT-CGTGCGCGGG CGCGACGACACCGGC Rmet_1259 1379309 - 1381414 + | hypothetical protein Rmet_1260 1381913 - 1381452 - | hypothetical protein Rmet_1261 1383101 - 1381974 - | hypothetical protein Rmet_1262 1384484 - 1383234 - | transposase, mutator type Rmet_1263 1385440 - 1384634 - | transposase/IS protein Rmet_1264 1386450 - 1385440 - | integrase catalytic subunit Rmet_1265 1387484 - 1386618 - | hypothetical protein Rmet_1266 1388893 - 1387484 - | beta-lactamase-like protein TERM 1025 1388466 - 1388432 - G 84 -13.4 -3.78775 | opp_overlap 1388427, overlap 1388387 1388433 GCCGGCATCACGAAA GCGGGCGCGCACCCCG ACG CGGGGTGCGAACTCCC GGTCGTATTCGATGC TERM 1026 1388467 - 1388433 - G 73 -14.3 -2.87051 | gap 2, opp_overlap 1388427, overlap 1388387 1388432 CCGGCATCACGAAAG CGGGCG--CGCACCCCG ACG CGGGGTGCGAACTCCCG GTCGTATTCGATGCC Rmet_1267 1390662 - 1389124 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_1268 1391777 - 1390659 - | ABC-type multidrug transport system permease component Rmet_1269 1392951 - 1391782 - | ABC-type multidrug transport system permease component TERM 1027 1392471 - 1392487 + g 71 -7.9 -4.12902 | overlap 1392474 1392483 CGCGCCAGGACTGGA CCACGCC GCG GGCGTAG TTTTCGACGTAGTTG TERM 1028 1392701 - 1392688 - G 71 -8.1 -4.07568 | GCGGGTGCCCGAAAA CGCTG CGGC CAGCG ACTGTGCCGATGCGC Rmet_1270 1393290 - 1393084 - | ISPsy5, transposase Rmet_1271 1393469 - 1394701 + | phage integrase Rmet_1272 1394698 - 1395645 + | phage integrase Rmet_1274 1398221 - 1396401 - | transposase IS66 Rmet_1273 1395642 - 1396637 + | phage integrase TERM 1029 1396922 - 1396958 + gT 86 -15 -3.35813 | GCACCGGCAGGCTGC GCGCCTGGCGCGCCGC ATACC GCTGCGCGTCGGTCGC TTCCTTGAACTCGCG Rmet_1275 1398603 - 1398244 - | IS66 Orf2 like Rmet_1276 1398938 - 1398603 - | hypothetical protein Rmet_1277 1399222 - 1398971 - | ATPase component ABC-type multidrug transport system Rmet_1278 1399238 - 1399627 + | transposase Rmet_1279 1399882 - 1399619 - | putative transposase Rmet_1281 1402289 - 1401177 - | hydrogenase expression/formation protein HypE Rmet_1280 1400002 - 1401393 + | integrase catalytic subunit Rmet_1282 1403449 - 1402286 - | hydrogenase expression/formation protein HypD Rmet_1283 1403685 - 1403458 - | hydrogenase assembly chaperone hypC/hupF Rmet_1284 1404815 - 1403676 - | hydrogenase maturation protein hypF TERM 1030 1404199 - 1404149 - G 73 -13.9 -2.87132 | opp_overlap 1404180 GCTGGTGGTGACACA GGCCCAGC-GCGCCCGCCGCGGCGT CGA AC-CAGCGGCCGGCGCTGCTGGTCA GCGGGCAGTTCAGGC TERM 1031 1404746 - 1404774 + g 84 -8.7 -4.56597 | CCGGCGACCAGTGCG CGCGGCCGTCC AGCACGA GGCAGGCCGCG TTTTTCAGCCAGGCG Rmet_1285 1405866 - 1404829 - | hydrogenase accessory protein HypB Rmet_1286 1406237 - 1405890 - | hydrogenase nickel insertion protein HypA Rmet_1287 1407384 - 1406230 - | hypothetical protein TERM 1032 1407261 - 1407246 - G 72 -8.2 -4.13014 | opp_overlap 1407247, overlap 1407247 CGCACAGGCTGAAAA GCCCCG CCAG CAGGGC CGGCCAGGTTTCGAC Rmet_1288 1407889 - 1407413 - | hypothetical protein Rmet_1289 1408121 - 1407891 - | rubredoxin-type Fe(Cys)4 protein Rmet_1290 1408990 - 1408127 - | HupH hydrogenase expression protein Rmet_1291 1409471 - 1409022 - | hydrogenase-1 expression HyaE Rmet_1292 1409789 - 1409487 - | hydrogenase assembly chaperone hypC/hupF Rmet_1293 1410456 - 1409791 - | HyaD peptidase Rmet_1294 1410861 - 1410478 - | XRE family plasmid maintenance system antidote protein TERM 1033 1410902 - 1410862 - R 74 -13.1 -3.14683 | overlap 1410864 AGATGCCTTGATCAA GAGGTGCCGAGGAACCGGC TTC GCCGGGCCTCCAGCACCGC CCCCAGAGGGGGGGG TERM 1034 1410900 - 1410864 - R 82 -14.3 -3.13522 | overlap 1410862 ATGCCTTGATCAAGA GGTGCCGAGGAACCGGC TTC GCCGGGCCTCCAGCACC GCCCCCAGAGGGGGG Rmet_1295 1411676 - 1410945 - | nickel-dependent hydrogenase b-type cytochrome subunit Rmet_1296 1412451 - 1411714 - | HupE/UreJ protein Rmet_1297 1414307 - 1412448 - | nickel-dependent hydrogenase, large subunit Rmet_1298 1415422 - 1414328 - | hydrogenase (NiFe) small subunit (hydA) TERM 1035 1415263 - 1415285 + g 70 -5.5 -4.21812 | gap 1, opp_overlap 1415272, overlap 1415256 1415252 ATTCCAGACCGTGCA GCCAGAGCAC CGGG GTGCGC-GGC TTGTTTTCCATCGCG Rmet_1299 1415555 - 1415956 + | hypothetical protein Rmet_1300 1416667 - 1415972 - | GMC oxidoreductase Rmet_1301 1416784 - 1417749 + | integrase catalytic subunit Rmet_1302 1418242 - 1417721 - | putative transposase Rmet_1303 1418538 - 1418275 - | transposase IS3/IS911 Rmet_1304 1418613 - 1419044 + | hypothetical protein Rmet_1305 1420982 - 1419138 - | sigma-54 factor, interaction region TERM 1036 1419662 - 1419672 + g 70 -5.4 -4.41348 | ATTCCAGCAAAACCG GGAT ATC ATCC TTTCTTTCACGCAAA Rmet_1306 1421985 - 1421155 - | alpha/beta hydrolase fold TERM 1037 1421530 - 1421511 - G 75 -2.9 -4.74103 | gap 1, opp_overlap 1421511, overlap 1421514 GGTCGAACGCAAAAA CAT-CGAG CAACT CTCGCATG TTGTCGATTGACGGA TERM 1038 1421913 - 1421901 - G 70 -4.8 -4.34008 | overlap 1421898 CATGAATCAAAAGAA CAGG CACTC CCTG ACCACGATCGTGATA TERM 1039 1422230 - 1422203 - R 77 -7.8 -4.4009 | gap 1, opp_overlap 1422217, overlap 1422226 1422227 1422229 GGCCACCGGATAAAA CCTAGTTCGACGG CCG CC-TCAAACCAGG CGTTCGTCCACGCCT Rmet_1307 1424115 - 1422721 - | membrane protein involved in aromatic hydrocarbon degradation Rmet_1308 1425255 - 1424194 - | alcohol dehydrogenase GroES-like protein TERM 1040 1424452 - 1424439 - G 73 -5.9 -4.38712 | overlap 1424440 TTGAGTCGCAGAAAA CGCCG ATCG CGGCA ACCGTTCCGCCGGGG TERM 1041 1426189 - 1426235 + r 76 -5.7 -4.62336 | gap 1, overlap 1426188 GCATTCTTGAAATTC GGCTGCGCCCT-CGTCTGCTGG AACA TCTTCAGGCGTACGGAGCAGCC TTTTTGAACTGGCCT TERM 1042 1426297 - 1426287 - R 76 -5.4 -4.66264 | CAAAACTCCGAAAAA GTTG GGG CAAC AAGAACCGGTCTTCG TERM 1043 1426798 - 1426811 + r 85 -2.3 -5.37593 | opp_overlap 1426797 CGCTGCGAAAGTCAG AACCG CTCT CGGTC TTTTTTGCTTTGCAG Rmet_1311 1428007 - 1426985 - | oxidoreductase FAD-binding region TERM 1044 1428073 - 1428039 - R 76 -13.6 -3.0263 | opp_overlap 1428046, overlap 1428042 1428046 ATTACGCTGTCAAGA TCACCAAGAGCGCGTG ATC CAGGCGCTCTTGATGG TCCCCTGAGACAGCA TERM 1045 1428070 - 1428042 - R 73 -13.9 -2.73994 | opp_overlap 1428046, overlap 1428039 1428046 ACGCTGTCAAGATCA CCAAGAGCGCGTG ATC CAGGCGCTCTTGA TGGTCCCCTGAGACA TERM 1046 1428066 - 1428046 - R 72 -11.1 -3.27923 | opp_overlap 1428046, overlap 1428042 1428039 TGTCAAGATCACCAA GAGCGCGTG ATC CAGGCGCTC TTGATGGTCCCCTGA Rmet_1312 1429093 - 1428107 - | methane/phenol/toluene hydroxylase Rmet_1313 1429462 - 1429148 - | monooxygenase component MmoB/DmpM TERM 1047 1429439 - 1429451 + g 78 -4.1 -4.7254 | GTTGTTAAAGTGGGC CGATG CAA TATCG TTTTTAGTCACAGCT Rmet_1314 1429838 - 1429503 - | Rieske (2Fe-2S) region Rmet_1315 1430160 - 1429894 - | toluene-4-monooxygenase system B TERM 1048 1430191 - 1430211 + r 87 -16.9 -3.01791 | TTGGTTGGTGGTTGC GCCGGTGGT CAT ACCACCGGC TCTTCAGGCAGCAGT Rmet_1316 1431731 - 1430229 - | methane/phenol/toluene hydroxylase Rmet_1317 1431982 - 1431791 - | 4-oxalocrotonate tautomerase Rmet_1318 1432782 - 1431994 - | hydratase/decarboxylase Rmet_1319 1433825 - 1432779 - | 4-hydroxy-2-ketovalerate aldolase Rmet_1320 1434756 - 1433845 - | acetaldehyde dehydrogenase Rmet_1321 1435623 - 1434835 - | hydratase/decarboxylase TERM 1049 1435624 - 1435638 + r 72 -2.8 -4.75174 | opp_overlap 1435625, overlap 1435625 TTTGTCCATGATCAC AGTTTG ATG CAAACG TTTTTGAGTTCCGTG Rmet_1322 1437131 - 1435620 - | aldehyde dehydrogenase TERM 1050 1436859 - 1436842 - G 72 -8.4 -4.11751 | opp_overlap 1436833, overlap 1436832 AGGAAGTCGTCAAAA CGACGG TTGATG CCGTCG GCCACCGCGTACAGC Rmet_1323 1437647 - 1437198 - | hypothetical protein Rmet_1324 1438613 - 1437669 - | catechol 2,3-dioxygenase TERM 1051 1438343 - 1438371 + g 79 -10.3 -4.08394 | CTTCGGGGAGCATTT GTGTCTTGAAGCC ATA GGCTTCGATACGC TTTTGCAGCGCGTCT Rmet_1325 1438987 - 1438631 - | ferredoxin Rmet_1326 1440054 - 1438990 - | oxidoreductase FAD-binding region TERM 1052 1439450 - 1439421 - G 70 -6.3 -4.2558 | overlap 1439408 1439422 CACCTGCCATGAAAA CCATGGGCTGGTC GGCT GACCTGCGCACGA AAAACCGGCCATAGG Rmet_1327 1440489 - 1440133 - | phenol hydroxylase region Rmet_1328 1442045 - 1440486 - | methane/phenol/toluene hydroxylase TERM 1053 1441379 - 1441363 - G 71 -4.3 -4.56597 | overlap 1441364 CTTTGCGCCGAAAAA CCGAAGG TGA CCGTCGA CATGTCCCCGTTGTA TERM 1054 1441915 - 1441943 + g 70 -2.4 -4.66609 | overlap 1441916 CAATCGTGGATCTTT ATGCTTTCGTAC TTGTC GTACGGAAACAC TTTTTCCATCGGCTG Rmet_1329 1442337 - 1442068 - | monooxygenase component MmoB/DmpM Rmet_1330 1443372 - 1442377 - | methane/phenol/toluene hydroxylase Rmet_1331 1443684 - 1443460 - | phenol hydroxylase subunit Rmet_1332 1444219 - 1444560 + | hypothetical protein Rmet_1333 1444571 - 1445317 + | acetoacetyl-CoA reductase Rmet_1334 1445377 - 1445841 + | hypothetical protein Rmet_1335 1446018 - 1446806 + | short-chain dehydrogenase/reductase SDR Rmet_1336 1446803 - 1447765 + | LysR family transcriptional regulator Rmet_1338 1448282 - 1447986 - | hypothetical protein Rmet_1337 1447762 - 1448040 + | putative lipoprotein TERM 1055 1448083 - 1448111 + gF 88 -8.8 -4.65916 | gap 1, overlap 1448084 ATATTCTTGTCCGAC ACGCCGCGATGCG CCTT CGC-TTGCGGCGC TTTTCTTCGGCTCGC TERM 1056 1448084 - 1448110 + gF 76 -12.3 -3.39068 | gap 1, overlap 1448083 TATTCTTGTCCGACA CGCCGCGATGCG CCTT CGC-TTGCGGCG CTTTTCTTCGGCTCG TERM 1057 1448183 - 1448171 - Gf 76 -9.1 -4.08216 | CCATTCTGCTGAAAA CGGTC TTT GACCG GCACTGACCCGGCAC TERM 1058 1449038 - 1449017 - g 71 -7.3 -4.13304 | AAACCATTGGGAAAA GACCAGC CACGCGCT GCTGGTC GGGGCCATCCTGCAT TERM 1059 1449829 - 1449805 - g 71 -9.1 -3.72576 | TGTCGCGTCAGGAAA CCGCGCGCCCG CTG CTGACGCCCGG CGAAGTCATGCAGCT Rmet_1339 1448292 - 1450286 + | TRAG protein Rmet_1340 1450283 - 1450747 + | CopG-like DNA-binding TERM 1060 1450885 - 1450912 + G 71 -10.6 -3.59979 | gap 1, overlap 1450886 GAGGTGATGCTGAAT CCCGATCGCACCC TTT GGGTG-GATCGGC TTTCCAGTGGGCGCG TERM 1061 1450886 - 1450911 + G 71 -14.1 -2.75844 | gap 1, overlap 1450885 AGGTGATGCTGAATC CCGATCGCACCC TTT GGGTG-GATCGG CTTTCCAGTGGGCGC TERM 1062 1451084 - 1451125 + G 71 -14.3 -2.73364 | gap 1 TTTTGCCGCCGGCAG CGCCGG-GGCCGGCCTTCGC GCT GCGCAAGCGGGCCATCGGCG TGATTCCGCTGGAGC TERM 1063 1451163 - 1451181 + G 70 -7.3 -4.05446 | opp_overlap 1451162 CGTGGAGGGAATGAT GACCGCC GCACA GGCGGGC TTTCTCGTTCGCGCC Rmet_1341 1450744 - 1451808 + | type II secretion system protein E Rmet_1342 1451805 - 1452188 + | conjugal transfer protein TrbC Rmet_1343 1452185 - 1452457 + | putative conjugal transfer trbD transmembrane protein TERM 1064 1453111 - 1453160 + G 70 -13.6 -2.64616 | gap 2 GCTGCTGACCGATTC CGCGCTGGT-C-GGTGGCCTGGCA CCGA TGCTGGGCGACCAGCACCTGCGCG TGGTGTCGGTGCGGG TERM 1065 1453751 - 1453761 + G 77 -8.2 -4.30014 | GTCACGCGCACCGAT GGCG CCA CGCC TTTTCGCTTGGTCAC TERM 1066 1453814 - 1453835 + G 70 -5.7 -4.25104 | ACGCTGGTCGCGGGG CCGACCGGC ATGG GCAAGTCGG TTTTGCTCGCCACGC TERM 1067 1454718 - 1454734 + G 72 -11.5 -3.54459 | TCGACCTCGACCTGG GGCCGGC GAC GCTGGCC TTTGCGGGCGCTTCC Rmet_1344 1452470 - 1454929 + | ATPase TERM 1068 1455580 - 1455537 - g 70 -10.9 -3.3636 | overlap 1455535 CCAGATCACACAAGA CCG-GGCCGCCTCGCTGGAGC TGGC GCGACAG-GCGGCGGCCACGG AACGTGCCCGCGAAG Rmet_1345 1454926 - 1455663 + | putative conjugal transfer TrbJ signal peptide protein TERM 1069 1455836 - 1455864 + G 70 -6 -4.30995 | gap 2 GCGAGGACGCCTGCC GCGCCGCTACCGAA GCC TTCCG--GCGGCGC TTCTTTTCTGGCCAG Rmet_1346 1455676 - 1455996 + | putative lipoprotein TERM 1070 1456478 - 1456491 + G 75 -8.1 -4.26076 | CCTGTGCTTCTTCGT GCTGG CGAT CCAGC TTTTCATCACGCTGA TERM 1071 1457338 - 1457281 - g 91 -20.5 -2.56596 | gap 1 GCCGCCAGCAACTCA CCCACGCCGCGACCACCGCCG-CGCACA CGC TGCGCGGCGGTGACGGTGGCGGCTCGGG GCAAGGCCCGAGCCT Rmet_1347 1455993 - 1457372 + | TrbL/VirB6 plasmid conjugal transfer protein Rmet_1348 1457397 - 1458101 + | conjugal transfer protein TERM 1072 1458361 - 1458343 - g 70 -11.6 -3.40403 | GCCGGCTGACGAGAA GGTGCGCG TCT CGCGCGCC AATGCCGAGGCCCGC TERM 1073 1458445 - 1458479 + G 71 -10.1 -3.64703 | overlap 1458446 1458447 GGACGGGGCGCTCTA TCA-GGTCTATGCGGCC GTG GGCCGCGT-GACCGTGG TTTCGCTCCAGCCGG Rmet_1349 1458098 - 1459090 + | conjugal transfer protein TrbG/VirB9/CagX TERM 1074 1459523 - 1459507 - g 71 -12.3 -3.27298 | opp_overlap 1459503 1459502 1459510, overlap 1459510 TTGCGCAAGGAGGAA GAAGCCG CTG CGGCTTC GTCGGTGTTCTTCCG Rmet_1350 1459093 - 1460364 + | conjugation TrbI-like protein TERM 1075 1460397 - 1460378 - g 74 -10.6 -3.72324 | GAGCGCGACCAAGAA GCTGCGGC TCGG GCCGCTGC CCAAGACCGAGAACG Rmet_1351 1460361 - 1460606 + | hypothetical protein TERM 1076 1460634 - 1460660 + T 100 -18.1 -3.44146 | opp_overlap 1460637, overlap 1460637 CCAACGGCATCCATC GAACGCGCAGC CCTCA GCTGCGCGTTC TTCATTCTGGAGGCC TERM 1077 1460657 - 1460637 - T 80 -14.7 -3.07935 | opp_overlap 1460634 1460637 ACGGCATCCATCGAA CGCGCAGCC CTC AGCTGCGCG TTCTTCATTCTGGAG TERM 1078 1460637 - 1460657 + T 91 -14 -3.8591 | opp_overlap 1460637, overlap 1460634 ACGGCATCCATCGAA CGCGCAGC CCTCA GCTGCGCG TTCTTCATTCTGGAG Rmet_1352 1461777 - 1460941 - | putative transmembrane protein TERM 1079 1462762 - 1462724 - g 73 -12.4 -3.40403 | gap 1 TCCCGTCTATCACAA GGC-CACGCAACGCGGG CAGCGC CCCGCGATCCGTGTGCC GCTGCCTGTCCCGTT Rmet_1353 1461789 - 1463000 + | ribosomal large subunit pseudouridine synthase D Rmet_1354 1462987 - 1463778 + | hypothetical protein Rmet_1355 1464031 - 1463804 - | putative transmembrane protein TERM 1080 1463966 - 1463948 - G 80 -8.8 -4.45168 | TCCGTAAAACAGAAA GGTGGCCA CGC CAGCCACC GCGTTGGTCTCGGTA TERM 1081 1464750 - 1464712 - g 75 -10.8 -3.86194 | AACTCTGGCGAGAAA TGGGCGAGGGCGCCGTGG CAG CCAGCACGCCTGCGCCCA ACGGCGCGGCCAATG TERM 1082 1464783 - 1464799 + G 72 -10.9 -3.53012 | opp_overlap 1464797 1464798 GATTCAGCCAGCCAG CGCTTGT CCG ACAAGCG TTTCGCCAGCCCGGC Rmet_1356 1464177 - 1466267 + | Poly(R)-hydroxyalkanoic acid synthase, class I TERM 1083 1466299 - 1466277 - f 81 -13.4 -3.31144 | opp_overlap 1466274 1466280, overlap 1466258 GCCTGAGCTTCATAA GGGCCGGC CCGCGAC GCCGGCCC GGATTTCGAACCGTT TERM 1084 1467062 - 1467043 - g 71 -10 -3.57263 | overlap 1467057 1467060 ATGGCTAGCCTGAAA CCGGCCTT CGAC AAGACCGG CACGGTGACGGCCGC TERM 1085 1467480 - 1467444 - g 71 -10 -3.56704 | opp_overlap 1467447, overlap 1467440 GCTGCACGAAATGAA GCGCCGCGATGCCAAG AAGGG CCTGGCCTCGCTGTGC ATCGGTGGTGGTATG Rmet_1357 1466344 - 1467525 + | acetyl-CoA acetyltransferase Rmet_1358 1467642 - 1468382 + | acetyacetyl-CoA reductase TERM 1086 1468444 - 1468465 + F 78 -10.1 -3.85817 | gap 1, overlap 1468444 AGTGCACAAGCATGA C-CCGGCCGG GCT CCGGCTGGCG TTTCTGGCGGGCGAT TERM 1087 1468473 - 1468509 + F 95 -15.2 -4.1043 | gap 1 GGCTGGCGTTTCTGG CGGGCGATG-CCGCGCA TTCG TGCGCGTTCATTGCCCG TTTGTCATCTTTCCA TERM 1088 1468781 - 1468769 - g 89 -4.7 -5.1861 | overlap 1468771 GCCACGAGCAAAAAA GGCGC AGA GCGAC TGATCAAGAAGTATC TERM 1089 1469240 - 1469215 - g 79 -3.9 -4.87807 | overlap 1469194 1469216 CGAACAGAGCAAAAA CCTGTTCGTGC AGAT GCAGGAGCAGA TGCAGAACCAGGCCA Rmet_1359 1468751 - 1469302 + | polyhydroxyalkanoate synthesis repressor PhaR TERM 1090 1469423 - 1469451 + F 89 -11 -4.16016 | overlap 1469425 1469446 1469450 CGTCGAATCGGGCGA GAGGGCATGGTC CAATT GGCCATGCCCTG TTTGTTCAGGGGTCC TERM 1091 1469425 - 1469449 + F 88 -13.6 -3.67877 | overlap 1469423 1469446 TCGAATCGGGCGAGA GGGCATGGTC CAATT GGCCATGCCC TGTTTGTTCAGGGGT Rmet_1360 1469429 - 1469872 + | hypothetical protein TERM 1092 1469911 - 1469895 - f 74 -11.5 -3.49618 | CGGGCACAGAACGAA GCCCGCC AAG GGCAGGC GCGCCAATATCGCTT Rmet_1361 1470059 - 1471429 + | hypothetical protein TERM 1093 1472324 - 1472357 + G 78 -16 -2.66316 | gap 1, overlap 1472320 ATGGAGCGTGCCGAG GCCGAGCGCCGCGGC CTGAA GCCGCTG-GCTCGGC TGGTGTCCTACGGCC Rmet_1362 1471529 - 1472713 + | beta-ketothiolase Rmet_1363 1472789 - 1473370 + | putative signal peptide protein Rmet_1364 1473497 - 1474699 + | cystathionine beta-lyase TERM 1094 1474742 - 1474710 - T 81 -13.3 -3.37796 | opp_overlap 1474704 1474701, overlap 1474711 GCTGACGAGCCAGAA TGCGCCCGGACGCGC TAG ACGCGTTCGAGCGCC GCGGGTTCTTCTGTC TERM 1095 1474741 - 1474711 - T 83 -16.8 -2.62463 | opp_overlap 1474704 1474701, overlap 1474710 CTGACGAGCCAGAAT GCGCCCGGACGCGC TAG ACGCGTTCGAGCGC CGCGGGTTCTTCTGT Rmet_1365 1476355 - 1474724 - | PepSY-associated TM helix Rmet_1366 1476665 - 1476375 - | putative transmembrane protein Rmet_1367 1476934 - 1476662 - | putative lipoprotein transmembrane TERM 1096 1476932 - 1476916 - G 75 -13.7 -2.98823 | GCGCGGCCAGATAGA GGCAGGC GGC GCCTGCC AAAGCGAGAAGTACG TERM 1097 1477150 - 1477122 - R 84 -17.5 -2.78596 | GAGTGGTGCAGCAGA CGGTGTCCGGC ACCAGCA GCCGGACACCG GAAGGCGGGGACTTA Rmet_1368 1478017 - 1477163 - | phosphoserine phosphatase TERM 1098 1478351 - 1478361 + G 72 -8.2 -3.97674 | opp_overlap 1478344 TCGCAAACTGGCCAT CGGC CTC GCCG TTCTTTCGGTACTCG Rmet_1369 1478331 - 1479338 + | thiosulphate-binding protein TERM 1099 1479363 - 1479341 - f 72 -12.6 -3.06261 | TGGCAAGCGGTAACA CGCGCGGCCG GGG CGGCCACGCT GCCCCGGCGTGCCAG TERM 1100 1480560 - 1480615 + G 74 -2.6 -4.82901 | opp_overlap 1480560 1480565 1480601 1480603, overlap 1480601 TGATTCCCAAACCGA TCAGAGTTGCAGAC-GCTGCGTGG CAAGCCCCCA CCACGCAACAGGC-GCAGCGCTGA TTTTTATCGACCCGC Rmet_1370 1479578 - 1480615 + | ABC transporter, substrate-binding protein, aliphatic sulphonates Rmet_1371 1480643 - 1481806 + | alkanesulfonate monooxygenase Rmet_1372 1481819 - 1482625 + | binding-protein-dependent transport systems inner membrane component TERM 1101 1483388 - 1483432 + G 81 -11.4 -4.08767 | gap 1 ACGTATCACGCTGGA TCAGCAG-GTGACGCTGGCAC GACC GCGCCAGCGTGGCACTGCGGA TTTTGCGCAAATCGA Rmet_1373 1482666 - 1483541 + | ABC transporter-related protein Rmet_1374 1483593 - 1484420 + | diguanylate phosphodiesterase Rmet_1375 1484417 - 1485082 + | hypothetical protein TERM 1102 1485152 - 1485170 + F 91 -13.8 -3.72576 | AATTTGTCTCGTAGG CCGGCGCG ATA TGCGCCGG TTTCATAAGGAAGCG Rmet_1376 1485321 - 1486169 + | Sulfate ABC transporter, permease protein CysT Rmet_1377 1486171 - 1487088 + | Sulfate ABC transporter, permease protein CysW TERM 1103 1487767 - 1487777 + G 77 -8.2 -4.21439 | opp_overlap 1487763, overlap 1487774 CCGTGTACAACCACC CGGC CAC GCCG TTTGTGTTCGGCTTC Rmet_1378 1487085 - 1488188 + | sulphate transport system permease protein 1 Rmet_1379 1488185 - 1489135 + | transcriptional regulator CysB-like protein TERM 1104 1490516 - 1490536 + G 77 -12.5 -3.58522 | ATCTGCAACATGCGC CTGCCGGTG TGG CCCCGGCAG TTTCCCGATCCTGAT Rmet_1380 1489378 - 1490550 + | histidine kinase internal region Rmet_1381 1490576 - 1491397 + | LytR/AlgR family transcriptional regulator Rmet_1382 1491466 - 1491978 + | ribonuclease activity regulator protein RraA Rmet_1383 1491982 - 1492398 + | hypothetical protein Rmet_1384 1492490 - 1493452 + | alpha/beta hydrolase fold Rmet_1385 1493756 - 1495051 + | isocitrate lyase TERM 1105 1495090 - 1495130 + T 100 -21.3 -3.77196 | gap 1, opp_overlap 1495094, overlap 1495091 1495094 CTGAGGTTGCAGTAC G-CAACGCCGCGTCGTCC GGTAGG GGACGGCGCGGCGTTGTC TTTGGTGCGTGCTGG TERM 1106 1495091 - 1495128 + T 100 -25 -3.46914 | opp_overlap 1495094, overlap 1495090 1495094 TGAGGTTGCAGTACG CAACGCCGCGTCGTCC GGTAGG GGACGGCGCGGCGTTG TCTTTGGTGCGTGCT TERM 1107 1495094 - 1495125 + T 100 -20.9 -3.86653 | opp_overlap 1495094, overlap 1495091 1495090 GGTTGCAGTACGCAA CGCCGCGTCGTCC GGTAGG GGACGGCGCGGCG TTGTCTTTGGTGCGT TERM 1108 1495125 - 1495094 - T 89 -18.7 -3.09516 | opp_overlap 1495094 1495091 1495090 GGTTGCAGTACGCAA CGCCGCGTCGTCC GGTAGG GGACGGCGCGGCG TTGTCTTTGGTGCGT Rmet_1386 1496740 - 1495151 - | hypothetical protein Rmet_1387 1497291 - 1496857 - | hypothetical protein Rmet_1388 1498537 - 1497449 - | LysR family transcriptional regulator TERM 1109 1498486 - 1498475 - G 70 -2.2 -4.67038 | GGTGCAAAAGTAAAA GATC AAGT GACC AGCCTTGGCTTTGCC Rmet_1389 1498574 - 1499287 + | haloacid dehalogenase, type II Rmet_1390 1499337 - 1500920 + | malate synthase TERM 1110 1500967 - 1500945 - T 100 -10.6 -5.42259 | opp_overlap 1500945 TCAGCCTGAAAAAAA TCCCACGG TGATGAG CCGTGGGA TTTTTTTTGCCGCCG TERM 1111 1500945 - 1500967 + T 100 -11.3 -5.75342 | opp_overlap 1500945 TCAGCCTGAAAAAAA TCCCACGGT GATGA GCCGTGGGA TTTTTTTTGCCGCCG Rmet_1391 1501443 - 1501033 - | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_1392 1501580 - 1502158 + | hypothetical protein TERM 1112 1502753 - 1502767 + G 74 -2.1 -4.73613 | gap 1 TTCTCGTCGAGACAT TCG-GC TGGC GCTCGA TTTTCTTCGTGGTGG Rmet_1393 1502155 - 1503681 + | EmrB/QacA family drug resistance transporter Rmet_1394 1503951 - 1503682 - | acyl-CoA-binding protein TERM 1113 1504045 - 1504030 - H 91 -6.1 -5.40072 | opp_overlap 1504030, overlap 1504032 1504034 TTCCGCGCAAAAAAA CCGAG GAACCG CTCGG TTGCTCCGGTTGGCG Rmet_1395 1504062 - 1504907 + | peptidase M22, glycoprotease Rmet_1396 1504904 - 1505470 + | SSU ribosomal protein S18P alanine acetyltransferase Rmet_1397 1505467 - 1506420 + | phage SPO1 DNA polymerase-related protein Rmet_1398 1506401 - 1507510 + | hypothetical protein Rmet_1399 1508880 - 1507561 - | hypothetical protein TERM 1114 1508170 - 1508146 - G 71 -12.1 -3.23216 | TTTGAGCACGATGAA CTGCAGCGTGG CGC CCACGCCCCAG AACAGGGTGGTGACC TERM 1115 1509065 - 1509079 + H 84 -11.4 -4.03234 | opp_overlap 1509064 1509063 1509061 CTCTTTTAAAACATT GCCGGA GCG TCCGGC TTTATATCACGAAAC alr 1509340 - 1510446 + | alanine racemase TERM 1116 1510956 - 1510911 - g 70 -11.2 -3.31461 | gap 2 GATTCAGTTGGAGAA GATCCAGGCCACGCTCGAGGCC GACA AGCC-CGAG-GTGGCCGTGATC GACTCGATCCAGACG TERM 1117 1511664 - 1511645 - g 73 -9.2 -3.85698 | GCCTGGCGGGAGAAA TCCGCCCG AGCC CGCGCGGA CAGGAGCGGCTCAAG Rmet_1401 1510447 - 1511814 + | DNA repair protein RadA TERM 1118 1511831 - 1511848 + T 100 -14.1 -4.8622 | opp_overlap 1511831 GTGGAAAGAAAAAAA GCCCCGC CGAA GCGGGGC TTTTTCATTGGCGCC TERM 1119 1511848 - 1511831 - T 100 -14.1 -5.95539 | opp_overlap 1511831 GTGGAAAGAAAAAAA GCCCCGC CGAA GCGGGGC TTTTTCATTGGCGCC Rmet_1402 1513985 - 1511889 - | hypothetical protein Rmet_1403 1514288 - 1514773 + | disulfide bond formation protein B Rmet_1404 1516791 - 1514869 - | ABC transporter-related protein TERM 1120 1516976 - 1516990 + G 75 -2.8 -4.72272 | opp_overlap 1516969 1516987 TTTACATAGATGGTT GCAC CGGGAAA GTGC TTTTTCATCAAAGCG Rmet_1405 1516970 - 1517983 + | RpiR family transcriptional regulator Rmet_1406 1518009 - 1518977 + | asparaginase Rmet_1407 1518979 - 1520871 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_1408 1520900 - 1522456 + | extracellular solute-binding protein Rmet_1409 1522673 - 1523593 + | binding-protein-dependent transport systems inner membrane component TERM 1121 1523708 - 1523726 + G 78 -13.8 -3.23692 | overlap 1523707 CCGCAAGCAGCATCT CGCGCTGG CCG CCGGCGCG TTCGTGCTGCTGCTG Rmet_1410 1523604 - 1524506 + | binding-protein-dependent transport systems inner membrane component Rmet_1411 1524506 - 1525564 + | peptidase S58, DmpA Rmet_1412 1525561 - 1526388 + | D-aminopeptidase DppA Rmet_1413 1526476 - 1527213 + | hypothetical protein TERM 1122 1527243 - 1527231 - f 81 -6.2 -4.82901 | opp_overlap 1527231 TTCGCTGGATAAAAA CGCC GGATT GGCG TTACATTGAGGGCAT Rmet_1414 1527286 - 1528371 + | hypothetical protein Rmet_1415 1528704 - 1531529 + | twin-arginine translocation pathway signal Rmet_1416 1531526 - 1532080 + | (2Fe-2S)-binding Rmet_1417 1532077 - 1533342 + | cytochrome c, class I TERM 1123 1533602 - 1533628 + G 100 -13.7 -4.20696 | gap 1, overlap 1533598 AATACCCATCGCCGT GGCAGCCGCCGG TATG CTGGCGGC-GCC TTTTGCCCTTGCTCA Rmet_1418 1533570 - 1533920 + | putative integral membrane protein TERM 1124 1533986 - 1533965 - T 100 -15.9 -4.16943 | opp_overlap 1533965 CTTGAGATGTGAAAA GCGCCGTGA GTGA TCACGGCGC TTTTTTTGCCTGGAA TERM 1125 1533965 - 1533986 + T 100 -15.9 -5.47218 | opp_overlap 1533965 CTTGAGATGTGAAAA GCGCCGTGA GTGA TCACGGCGC TTTTTTTGCCTGGAA Rmet_1419 1534981 - 1534088 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Rmet_1420 1536138 - 1534987 - | succinyl-diaminopimelate desuccinylase Rmet_1421 1536504 - 1536157 - | hypothetical protein TERM 1126 1536243 - 1536191 - G 85 -7.6 -4.62069 | gap 1, opp_overlap 1536205 1536211 CCGTCAGCGGAAAAA CCGACGCTGACCTTGCCGTCGCG GTCCAGCA CGGGACG-CTTGATCAGCGACGG GCTGGTCTGCATCAG Rmet_1422 1536949 - 1536521 - | twin-arginine translocation pathway signal TERM 1127 1536918 - 1536948 + g 78 -13.9 -3.25823 | overlap 1536920 GGCATCGGCTGGGCT TCGCGCCGCCGGG GCGTG CCCGGCGGCGGCA TTGCTGTCAAGGCGC TERM 1128 1536920 - 1536947 + g 81 -16.3 -2.55351 | gap 1, overlap 1536918 CATCGGCTGGGCTTC GC-GCCGCCGGG GCGTG CCCGGCGGCGGC ATTGCTGTCAAGGCG dapD 1537791 - 1536967 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Rmet_1424 1539124 - 1537892 - | hypothetical protein Rmet_1425 1540031 - 1539192 - | hypothetical protein TERM 1129 1541591 - 1541570 - g 74 -10.1 -3.76492 | overlap 1541571 1541583 1541585 TCGAATCGCAGGAAA CCGTCGCCC AGAA GAGCGACGA ACTGCCGACGCTGGA Rmet_1426 1540486 - 1544001 + | condensin subunit Smc Rmet_1427 1544003 - 1545322 + | hypothetical protein TERM 1130 1545377 - 1545352 - g 100 -16.1 -4.20768 | opp_overlap 1545369 ACCGCCAAGAAACAA GGCGCGCAGGC TTCG GCCTCCGCGCC GTCCGGCGATTCCCC TERM 1131 1546476 - 1546515 + G 76 -9.2 -4.1552 | gap 1, overlap 1546496 GGTCCAGGTCGGGCG CACCGGTGCGA-TCACGCC GGT GGCGCGACTGGCGCCAGTG TTTGTTGGCGGGGTC Rmet_1428 1545334 - 1547499 + | DNA ligase, NAD-dependent Rmet_1429 1547523 - 1548056 + | peptide deformylase Rmet_1430 1549486 - 1548044 - | major facilitator transporter TERM 1132 1548796 - 1548761 - G 71 -11.8 -3.23692 | gap 1, overlap 1548762 1548781 GAGCAGCAGCATCAA CGGCGCCGTGGCGGCCA GAA CGGCCAGCACGG-GCCA CGACCAGCGAAACAT TERM 1133 1550412 - 1550431 + G 77 -12.1 -3.67102 | overlap 1550408 1550400 CAACTGGTGGACCGC GCCGCGC AACGGC GCGCGGC TTCTGGTTTATGTGC Rmet_1431 1549606 - 1550517 + | XRE family transcriptional regulator Rmet_1432 1552413 - 1550581 - | pseudouridine synthase, Rsu TERM 1134 1551575 - 1551621 + g 71 -13.7 -2.67747 | gap 1, overlap 1551544 1551543 1551574 CCGTAGCGGCGGGGA CGTTCGGCGCGATTGTCGTCGC CATA GCGGCG-CGGTTGCGCGGAGCG GTTGTCGTCTCCAGC Rmet_1433 1555014 - 1552441 - | PII uridylyl-transferase TERM 1135 1554151 - 1554175 + g 71 -9.2 -3.76482 | TGCCCAGTAGTAGCG GCGCATCAGC TGCTC GCTGGCGCGC TTGTTCGTGGTCTGC TERM 1136 1555076 - 1555057 - R 100 -12.1 -4.44667 | opp_overlap 1555074 GGCTGCAAGAAGAAA GGGCGCC GTGGTT GGCGCCC TGGCGAACGATGCGG Rmet_1434 1555912 - 1555094 - | methionine aminopeptidase rpsB 1556260 - 1557003 + | 30S ribosomal protein S2 TERM 1137 1557070 - 1557090 + F 84 -9.6 -4.56597 | opp_overlap 1557070 GCGGCAACTAAAAAA GGGGGCAC AGCTG GCGCCCCC TTTTTGCAAACAGAA TERM 1138 1557090 - 1557070 - f 100 -11.8 -5.26875 | opp_overlap 1557070 GCGGCAACTAAAAAA GGGGGCAC AGCTG GCGCCCCC TTTTTGCAAACAGAA tsf 1557231 - 1558109 + | elongation factor Ts TERM 1139 1558199 - 1558168 - f 100 -20.2 -3.32844 | opp_overlap 1558158, overlap 1558187 CTGGCCACCGTATAA TGCAGAGGGGCGCC GAAA GGTGCCCCTCTGCA CAAGTGCGGCCTTCA pyrH 1558348 - 1559124 + | uridylate kinase frr 1559233 - 1559793 + | ribosome recycling factor Rmet_1439 1559846 - 1560616 + | undecaprenyl pyrophosphate synthetase Rmet_1440 1560659 - 1561480 + | phosphatidate cytidylyltransferase Rmet_1441 1561512 - 1562690 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1140 1562792 - 1562836 + G 70 -11.4 -3.37071 | gap 1, opp_overlap 1562790, overlap 1562780 TTTGTGCACGAGATG GGGCACTACCTTGCCGCGCGC GCTT GCG-GCGTCAAGGTGCTGCGC TTCTCGATCGGCTTT Rmet_1442 1562732 - 1564123 + | peptidase RseP Rmet_1443 1564200 - 1566575 + | surface antigen (D15) Rmet_1444 1566597 - 1567130 + | outer membrane chaperone Skp (OmpH) lpxD 1567183 - 1568292 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 1568289 - 1568741 + | (3R)-hydroxymyristoyl-ACP dehydratase Rmet_1447 1568781 - 1569584 + | UDP-N-acetylglucosamine acyltransferase lpxB 1569597 - 1570802 + | lipid-A-disaccharide synthase rnhB 1570802 - 1571482 + | ribonuclease HII Rmet_1450 1571492 - 1572280 + | tRNA/rRNA methyltransferase (SpoU) TERM 1141 1572331 - 1572358 + T 74 -11.2 -3.45054 | overlap 1572326 1572324 ATCTGGCTCGCCCGG CAGCCGGCTGTC CTGT GCCAGCAGGCTG TTCTGCCTTCTGAGA Rmet_1451 1572853 - 1572314 - | hypothetical protein TERM 1142 1572887 - 1572923 + r 95 -19.5 -3.28712 | opp_overlap 1572880, overlap 1572913 TTGGAACAGCCTTCA TCGTGCCCCTATCGGTG CAG CGCCGATAGGGGGGCGA TTCTGAAAACGCCAC Rmet_1452 1573756 - 1572944 - | hypothetical protein Rmet_1453 1574130 - 1576514 + | phosphoenolpyruvate synthase TERM 1143 1576614 - 1576645 + F 100 -18.8 -5.26119 | gap 1 CAGGTGTTCCATCTG CCCCCG-CAGACGCC GTA GGCGTTTGGCGGGGG TTTTGTTTTTGCGGG Rmet_1454 1576695 - 1577129 + | hypothetical protein Rmet_1455 1577179 - 1578117 + | SPFH domain-containing protein/band 7 family protein TERM 1144 1578142 - 1578186 + T 100 -20.4 -3.40403 | gap 1, opp_overlap 1578149 1578155, overlap 1578149 1578155 GGGACCAATAGGTTG GCAG-AAACAAAAACGGAGGC TCAT GCCTCCGTTTTTGTTTATTGC TTATGCTGCGCAGCC TERM 1145 1578178 - 1578149 - T 100 -19.5 -3.86524 | opp_overlap 1578149 1578142 1578155, overlap 1578155 ATAGGTTGGCAGAAA CAAAAACGGAGGC TCAT GCCTCCGTTTTTG TTTATTGCTTATGCT TERM 1146 1578149 - 1578178 + T 100 -19.5 -4.37199 | opp_overlap 1578149 1578155, overlap 1578142 1578155 ATAGGTTGGCAGAAA CAAAAACGGAGGC TCAT GCCTCCGTTTTTG TTTATTGCTTATGCT TERM 1147 1578172 - 1578155 - T 100 -12.7 -5.38054 | opp_overlap 1578155 1578149 1578142, overlap 1578149 TGGCAGAAACAAAAA CGGAGGC TCAT GCCTCCG TTTTTGTTTATTGCT TERM 1148 1578155 - 1578172 + T 100 -12.7 -5.48514 | opp_overlap 1578149 1578155, overlap 1578149 1578142 TGGCAGAAACAAAAA CGGAGGC TCAT GCCTCCG TTTTTGTTTATTGCT smpB 1578655 - 1578203 - | SsrA-binding protein TERM 1149 1578240 - 1578257 + g 76 -5.5 -4.49132 | overlap 1578241 ATGATGCGAGCCTTC TCGCGAT CCCA GTCGCGG TTCTTTTCTGTTTCG TERM 1150 1578370 - 1578392 + g 87 -7.6 -4.82667 | CCAACGTATAGCCGC GCTGCTCGAC CTT GCCGATCAGC TTTTTGATCTCGTCG Rmet_1457 1578832 - 1579281 + | cyclase/dehydrase Rmet_1458 1579256 - 1579621 + | hypothetical protein Rmet_1459 1580326 - 1579787 - | putative transmembrane protein Rmet_1460 1581380 - 1580421 - | putative transmembrane protein Rmet_1461 1581506 - 1582969 + | inositol-5-monophosphate dehydrogenase TERM 1151 1583551 - 1583521 - gf 77 -11 -3.62046 | CGACTCCCCGAACAA CGAACCCGGCGTGC CCC GCACGGCGCGCCCG AATGGATCCCCTGCA Rmet_1462 1583057 - 1583698 + | putative transmembrane protein guaA 1583673 - 1585292 + | bifunctional GMP synthase/glutamine amidotransferase protein Rmet_1464 1585535 - 1585311 - | hypothetical protein TERM 1152 1585469 - 1585497 + g 83 -14.7 -3.29043 | opp_overlap 1585495, overlap 1585495 CTCGTTCACTATTCA GACTTTTACCGTC TTT GACGGTAAAAGCC TTCTCGGGAAAGCTT Rmet_1465 1585594 - 1586850 + | phage integrase Rmet_1466 1587051 - 1587326 + | hypothetical protein Rmet_1467 1587331 - 1587855 + | prophage CP4-57 regulatory TERM 1153 1587887 - 1587905 + T 100 -13.1 -4.7497 | CATTTCTCGCTCGAA CCCGCCC GGACA GGGCGGG TTTTTCGTAGGTGGA Rmet_1468 1588281 - 1587871 - | phage transcriptional regulator, AlpA Rmet_1469 1589124 - 1588375 - | TatD-related deoxyribonuclease Rmet_1470 1590505 - 1589138 - | hypothetical protein Rmet_1471 1591383 - 1590502 - | hypothetical protein Rmet_1472 1593317 - 1591383 - | KAP P-loop TERM 1154 1592985 - 1593017 + g 87 -6.1 -5.00616 | CTTCAGCCAGTCGAT GCGACGGAAGACGTC CTT GATGGCTACTGCCGC TTTTTTCAGCGCCGG Rmet_1473 1594307 - 1593336 - | retron reverse transcriptase TERM 1155 1593536 - 1593558 + g 70 -7.7 -3.97307 | overlap 1593549 CACGAATCTTGTTGC GCGTGGCTT TGTCC AAGCCAGGC TTGTTGTTCACTGCG TERM 1156 1593670 - 1593682 + g 72 -3.3 -4.7078 | overlap 1593681 ATGCCGTACACCTGC CGCAC TAC GTTCG TTTTTGCCTCGTTGG Rmet_1474 1594870 - 1594631 - | hypothetical protein Rmet_1475 1595652 - 1596002 + | hypothetical protein Rmet_1476 1596440 - 1596102 - | hypothetical protein TERM 1157 1596165 - 1596137 - G 79 -14.5 -3.01712 | opp_overlap 1596137 1596136 TGGCGCCCCTGAACA CCGCCGACCCGGC TGT GCCGGATCGGCCA GATTTCATTCGCAGC TERM 1158 1596244 - 1596278 + g 87 -17.8 -2.79183 | GCTTCTGAAGTCTGG GCGTCCCCGGCCACCT GGG AGATGGCCGGGCGCGC TGTCGTGCGCGTGGC Rmet_1477 1596748 - 1597578 + | hypothetical protein Rmet_1478 1597643 - 1599685 + | ParB family protein TERM 1159 1599698 - 1599730 + T 89 -17.1 -3.14051 | gap 1, opp_overlap 1599662 1599702, overlap 1599702 TGACCGGCGCCGAAG GC-AAGCGCCCCGG CTTAGA CCGGGGCGCTTTGC TATTGGTGCGGCTCC TERM 1160 1599702 - 1599725 + T 100 -16.7 -3.95022 | opp_overlap 1599662 1599702, overlap 1599698 CGGCGCCGAAGGCAA GCGCCCCGG CTTAGA CCGGGGCGC TTTGCTATTGGTGCG TERM 1161 1599725 - 1599702 - T 89 -17.4 -3.17075 | opp_overlap 1599702 1599698, overlap 1599662 CGGCGCCGAAGGCAA GCGCCCCGGC TTAG ACCGGGGCGC TTTGCTATTGGTGCG TERM 1162 1599792 - 1599765 - T 100 -19.8 -4.70879 | overlap 1599766 CGGAAACGCCAAAAA TCCGGGCGCGGC GGTA GCCGCGCCCGGT GTCAAAGCACAACAG TERM 1163 1599791 - 1599766 - T 100 -23.3 -3.41804 | overlap 1599765 GGAAACGCCAAAAAT CCGGGCGCGGC GGTA GCCGCGCCCGG TGTCAAAGCACAACA TERM 1164 1599840 - 1599799 - T 100 -26.1 -3.53012 | opp_overlap 1599805, overlap 1599800 1599802 1599805 GCGCCCGGTGTCAAA GCACAACAGTCTGAGCCGC AAAG GCGGCTCAGACTGTTGTGA TGACGTCGCATAGTG TERM 1165 1599839 - 1599800 - T 100 -29.6 -2.71712 | opp_overlap 1599805, overlap 1599799 1599802 1599805 CGCCCGGTGTCAAAG CACAACAGTCTGAGCCGC AAAG GCGGCTCAGACTGTTGTG ATGACGTCGCATAGT TERM 1166 1599837 - 1599802 - T 100 -26.4 -2.90496 | opp_overlap 1599805, overlap 1599800 1599799 1599805 CCCGGTGTCAAAGCA CAACAGTCTGAGCCGC AAAG GCGGCTCAGACTGTTG TGATGACGTCGCATA TERM 1167 1599834 - 1599805 - T 100 -22.3 -3.60151 | opp_overlap 1599805, overlap 1599802 1599800 1599799 GGTGTCAAAGCACAA CAGTCTGAGCCGC AAAG GCGGCTCAGACTG TTGTGATGACGTCGC TERM 1168 1599805 - 1599834 + T 100 -22.3 -3.41602 | opp_overlap 1599805 1599802 1599800 1599799 GGTGTCAAAGCACAA CAGTCTGAGCCGC AAAG GCGGCTCAGACTG TTGTGATGACGTCGC Rmet_1479 1600910 - 1599888 - | hypothetical protein Rmet_1480 1601776 - 1602090 + | hypothetical protein TERM 1169 1602093 - 1602132 + T 100 -18.5 -4.08767 | gap 1, opp_overlap 1602075, overlap 1602120 CCAGGCGGCCTGACG GCCGC-CAGCGCCCCGCC CACGC GGCGGGGCGCAGTGCTGC TTTTGCGGCGCTGCG TERM 1170 1602228 - 1602254 + T 71 -7.8 -4.11216 | CAGCAAGGACGGCCG GGCGTGCGGTGC CTT GCACCGCCGGGC TTTTCGGGCTGCGCC TERM 1171 1602438 - 1602409 - T 80 -14.9 -3.01712 | opp_overlap 1602411 1602417 1602419 GGCGCCCCTTGAACA CCGCCGAACCGGC TTTC GCCGGATCGGCCG GGCCGTCGCCTACGG Rmet_1481 1602741 - 1602448 - | XRE family transcriptional regulator TERM 1172 1602916 - 1602865 - H 87 -10.2 -4.37092 | opp_overlap 1602865 1602896 1602899, overlap 1602840 1602896 AGGCTTCCTACAAAA GCGCAAAGCCTCATCCGTGCATTT CTTC AAATCCGCCGATACGGCTTTACGC TTTGACGTTTCGGTG Rmet_1482 1602957 - 1603304 + | putative lipoprotein TERM 1173 1603881 - 1603845 - g 71 -13 -3.01712 | gap 2 GCGCCTGCTGGAAGA CCCGGCCCTGGATGCGCG CGA CGCGCACCC-GG-CCTGG CTGCCCGGCAATGCC Rmet_1483 1603648 - 1604439 + | hypothetical protein Rmet_1484 1604478 - 1604804 + | hypothetical protein TERM 1174 1605361 - 1605305 - g 73 -12.2 -3.40867 | gap 1, overlap 1605306 1605310 1605314 TCATGGATCAACGAA TGGAAGGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCCTGCCG GACTGGTTCTATGCG TERM 1175 1605360 - 1605306 - g 77 -15.7 -2.64199 | gap 1, overlap 1605305 1605310 1605314 CATGGATCAACGAAT GGAAGGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCCTGCC GGACTGGTTCTATGC TERM 1176 1605356 - 1605310 - g 78 -13.7 -3.24613 | gap 1, overlap 1605306 1605305 1605314 GATCAACGAATGGAA GGAACTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTGATCC TGCCGGACTGGTTCT TERM 1177 1605352 - 1605314 - g 70 -11.7 -3.41636 | gap 1, overlap 1605310 1605306 1605305 AACGAATGGAAGGAA CTGGCCGATG-CCAGCGG CACG CCGCTGGGCATCGAGCTG ATCCTGCCGGACTGG Rmet_1485 1604819 - 1605688 + | putative replication initiator and transcription repressor protein TERM 1178 1605995 - 1605969 - gf 84 -11.6 -4.05446 | gap 1, overlap 1605985 TTGCTCAACCAGAAA GGCG-GCGTGG GTAAGA CCACGCTCGCC ACCCATATCGCCGGC Rmet_1486 1605942 - 1606580 + | cobyrinic acid a,c-diamide synthase TERM 1179 1606622 - 1606607 - gf 78 -10.4 -3.85704 | opp_overlap 1606619, overlap 1606599 1606602 CCACCAAGCAGCAAA CGCGCT GCCA AGCGCG TCGGCATCGGTGCAC TERM 1180 1606756 - 1606740 - gf 76 -15.1 -2.62616 | TGACGCTCGACATCA CGCCCGC GAT GCGGGCG CGCATCAAGGTGTCG TERM 1181 1607176 - 1607197 + GF 74 -12.3 -3.14051 | gap 1, overlap 1607174 GCGCAGCGCATCCCC GGCGTGCAGC CCG GC-GCACGCC TGTTGCTGCACGTCG Rmet_1487 1606555 - 1607400 + | hypothetical protein Rmet_1488 1607397 - 1607984 + | TraF peptidase TERM 1182 1608056 - 1608104 + F 72 -14 -2.52464 | TCGCCGTGTCGTCGC GCGTGCAGTGCGGGTGC-CAATCC TGC GCATTGGGCACC-GCACTTCGCGC TGCCTTCGGCGCAGC TERM 1183 1608710 - 1608689 - g 82 -15.9 -3.17051 | overlap 1608687 1608705 GCGTGACCATCAAGA CGCTGCTGG TCAA CCAGCAGCG GGCCAGCCCGCAGTC TERM 1184 1609400 - 1609376 - g 75 -6.9 -4.4017 | CCAATGCGGAGAAAA CCCTGCGCGCC CTG GGCGAGCGTGG CGACATCATCCGCAC Rmet_1489 1608307 - 1610409 + | hypothetical protein Rmet_1490 1611011 - 1610418 - | AraC family transcriptional regulator TERM 1185 1613378 - 1613366 - g 88 -9.1 -4.63932 | opp_overlap 1613366 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 1186 1613701 - 1613714 + G 70 -2.3 -4.67353 | overlap 1613702 1613712 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Rmet_1491 1611195 - 1614110 + | transposase Tn3 Rmet_1492 1615083 - 1614223 - | fructose-bisphosphate aldolase Rmet_1493 1615350 - 1615177 - | hypothetical protein Rmet_1494 1615732 - 1615529 - | hypothetical protein TERM 1187 1615758 - 1615768 + r 100 -4.6 -5.75342 | CCTCAAGTGTAGATG TCCG GGG CGGG TTTTTTTTCGAGCGC Rmet_1495 1615948 - 1615745 - | hypothetical protein Rmet_1496 1616368 - 1615994 - | hypothetical protein Rmet_1497 1616680 - 1616384 - | hypothetical protein Rmet_1498 1619046 - 1616689 - | von Willebrand factor, type A Rmet_1499 1619862 - 1619059 - | ATPase TERM 1188 1619986 - 1619955 - R 100 -13.7 -5.45802 | gap 1 CCTGGAAAACAAAAA GCCCCCGATTGCGC TTGCC GCGCAG-CGGGGGC CAGATACTGCCAACC Rmet_1500 1620368 - 1620012 - | ribulose 1,5-bisphosphate carboxylase small subunit rbcL 1621867 - 1620446 - | ribulose bisophosphate carboxylase TERM 1189 1621102 - 1621133 + g 70 -11.5 -3.42583 | overlap 1621099 CGTGCATGATGATCG GCGCGCCGATTTC CTTGGC GTACTCGGCGCGC TTGTACATCTCTTCC TERM 1190 1622433 - 1622411 - g 71 -10.6 -3.63515 | CCGCATCGCCAACAA CGAGGATGAC CTG ACCATCCTCG GTGCTCCGCCCGAGG Rmet_1502 1621992 - 1622873 + | LysR family transcriptional regulator Rmet_1503 1623052 - 1624302 + | transposase, mutator type Rmet_1504 1624614 - 1624306 - | hypothetical protein TERM 1191 1624539 - 1624559 + g 81 -11.1 -4.07568 | CACTGAAAGAACCTT GGTGGGTGC CGA GCAGCCACC TTTTCACGAGAGACG Rmet_1505 1625294 - 1624713 - | ISSod11, transposase Rmet_1506 1628506 - 1625591 - | transposase Tn3 TERM 1192 1626000 - 1625987 - G 70 -2.3 -4.67353 | overlap 1625958 1625988 GTAGTCAGCCAAAAA CGCCG TACG CAGCA ACCGCCCCAATTGCA TERM 1193 1626323 - 1626335 + g 88 -9.1 -4.63932 | opp_overlap 1626319 ATCCACAGCAAGCTG GCTGG TCT CCAGC TTTTCTTGGCGGATG Rmet_1507 1629444 - 1628605 - | D-fructose 1,6-bisphosphatase TERM 1194 1629377 - 1629354 - G 100 -19.6 -4.84359 | GGAGTTCCAGAAAAA CCCCCTCCGC TACA GCGGAGGGGG TGAAGGCACTTGCCG TERM 1195 1629606 - 1629577 - R 100 -14.3 -4.64861 | gap 1, overlap 1629562 CGGGGCCAAAACAAA GCCCCCGAGTTGCC GAA GGCAG-TCGGGGGC GGGAGGCGGCCACAG Rmet_1508 1630875 - 1629952 - | LysR family transcriptional regulator Rmet_1509 1630981 - 1631145 + | hypothetical protein Rmet_1510 1631163 - 1631861 + | ribulose-5-phosphate 3-epimerase Rmet_1511 1632041 - 1633138 + | D-fructose 1,6-bisphosphatase Rmet_1512 1633171 - 1634055 + | phosphoribulokinase/uridine kinase TERM 1196 1634252 - 1634237 - g 71 -11.8 -3.29144 | TCATCTGCGCCACAA CCCGGG CAAT CCCGGG TGGCCCGACCGCGAC Rmet_1513 1634055 - 1636109 + | transketolase TERM 1197 1636572 - 1636560 - g 71 -10.5 -3.61398 | opp_overlap 1636553 CCTGCGCGTGAAGAA GCCCG ATC CGGGC GTGCTGCGTCATGTC Rmet_1514 1636111 - 1636842 + | phosphoglycolate phosphatase TERM 1198 1637445 - 1637420 - g 71 -9.7 -3.71848 | gap 1, overlap 1637417 CGGCCCGAGCAACAA GGACTGGCGCGG CGG CCGCGGCA-TCC TCGAGAACATCATCC Rmet_1515 1636839 - 1637846 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1199 1638232 - 1638220 - g 75 -9.1 -4.02817 | overlap 1638222 1638223 GGGCGAGAAGAAGAA CAGCG AGG CGCTG GCGCGCCAGATGGCG pgk 1637843 - 1639033 + | phosphoglycerate kinase Rmet_1517 1639030 - 1639848 + | HAD family hydrolase Rmet_1518 1639908 - 1640945 + | fructose-1,6-bisphosphate aldolase Rmet_1519 1640960 - 1642378 + | pyruvate kinase Rmet_1520 1642414 - 1643232 + | triosephosphate isomerase TERM 1200 1643294 - 1643253 - g 70 -14.3 -2.57944 | gap 1, overlap 1643252 CAGGACGAGATCAAG GCCATGGTCGCCCGTGCGGC GCT GCCGCACGTGCTGCC-CGGC AGCATCATCGGCGTG Rmet_1521 1643232 - 1643891 + | ribose-5-phosphate isomerase A Rmet_1522 1644017 - 1645825 + | respiratory-chain NADH dehydrogenase domain-containing protein Rmet_1523 1645822 - 1646532 + | ferredoxin Rmet_1524 1646529 - 1647158 + | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 1201 1647483 - 1647468 - g 70 -5.4 -4.36914 | gap 1 CGGCCGCGGAGAAAA TGCGCCG CCT CGGC-CA CTACGCGCAGATGCT Rmet_1525 1647176 - 1648642 + | nickel-dependent hydrogenase, large subunit Rmet_1526 1648626 - 1649132 + | HoxW protein Rmet_1527 1649145 - 1649648 + | cyclic nucleotide-binding domain-containing protein Rmet_1528 1649985 - 1650758 + | alanine dehydrogenase/PNT-like protein Rmet_1529 1651775 - 1650747 - | integrase catalytic subunit TERM 1202 1651670 - 1651699 + g 75 -7.7 -4.23781 | overlap 1651665 TAGTGCTCTTGTCAC GCCCCAGGGCCCT GGCT ATGGCGCTGAGGC TTTGCTTTTGCTGCA Rmet_1530 1651793 - 1652236 + | alanine dehydrogenase/PNT-like protein Rmet_1531 1652237 - 1652542 + | pyridine nucleotide transhydrogenase subunit alpha Rmet_1532 1652539 - 1653912 + | NAD(P) transhydrogenase, beta subunit TERM 1203 1654708 - 1654738 + G 93 -3.9 -5.46657 | overlap 1654671 GGAGCTGGCCTTCGG GCTGTCCGTGGTG TGCGT CATCGCTGGTAGC TTTTTTCTTGCGCTG Rmet_1533 1653974 - 1654810 + | high-affinity nickel-transporter Rmet_1534 1655263 - 1655568 + | hypothetical protein Rmet_1535 1655561 - 1655902 + | hydrogenase nickel insertion protein HypA Rmet_1536 1655936 - 1656916 + | hydrogenase accessory protein HypB TERM 1204 1659103 - 1659128 + G 72 -13.3 -3.14344 | gap 1, opp_overlap 1659094 AGGACACCGGCGTGC GCA-CCGTCGCC TTC GGCGGCGGCTGC TTCCTCAACCACATC Rmet_1537 1656930 - 1659287 + | (NiFe) hydrogenase maturation protein HypF Rmet_1538 1659340 - 1659528 + | hydrogenase assembly chaperone hypC/hupF TERM 1205 1660007 - 1659989 - g 76 -13.8 -3.14132 | opp_overlap 1659980 CGCGCTGGTGATCAA GCAGGCCG AGG CGGCCCGC GTCACCAACTTCAGT Rmet_1539 1659525 - 1660667 + | hydrogenase expression/formation protein HypD TERM 1206 1660728 - 1660677 - f 100 -23 -3.20723 | opp_overlap 1660694 GCTTGATGAATTTAA CCGCAGAGACGCAGAGGCGCAGAG TTTT CTCCGTGTCTCGGCGCCTCTGCGG TGAGGATCGACGATG TERM 1207 1661529 - 1661553 + G 73 -12.1 -3.35992 | GGCGATTCCGGTGAA TCCGCAGGTGG CGG CCGCCTGCGAA TTCCTTGGCCTGGAT Rmet_1540 1660741 - 1661790 + | hydrogenase expression/formation protein HypE TERM 1208 1661866 - 1661811 - f 78 -16.1 -2.64803 | opp_overlap 1661815, overlap 1661815 TGATTTTGAAACGCA GAGACGCCGAGACGCGGAGGAATTC AGAACA GGTTTTCTCGGCGCCTCGGCGCCTC GGCGTTTAATGCAGC TERM 1209 1661815 - 1661870 + F 76 -10.3 -3.73224 | opp_overlap 1661815 1661811 TTTGAAACGCAGAGA CGCCGAGACGCGGAGGAATTCAGAA CAGGTT TTCTCGGCGCCTCGGCGCCTCGGCG TTTAATGCAGCGTGA TERM 1210 1663062 - 1663100 + G 80 -14.5 -3.15544 | GGCGGCCAGCTCACC GTCGCCGCGCTGCGC-GGC AAC GCCGGCGCCG-GCGGCGCC TTCCTGGCGCTGGCG TERM 1211 1663424 - 1663406 - g 70 -11.6 -3.40403 | overlap 1663407 GCGGCTCGAGGAGAA GCGCGCGC GGC GCGTGCGC GACGAGGCCGTGAAG Rmet_1541 1661889 - 1663628 + | formyl transferase-like protein TERM 1212 1664036 - 1664020 - g 80 -13.7 -3.39327 | GCTGCAGAGCGAGAA CCAGCGC CTG GCGCTGG AGCTGCGCACCAGCG Rmet_1542 1663625 - 1664554 + | response regulator receiver domain-containing protein Rmet_1543 1664927 - 1664544 - | stress responsive alpha-beta barrel TERM 1213 1664957 - 1664969 + H 71 -6.9 -4.1899 | opp_overlap 1664957, overlap 1664935 1664943 CGGCGGCGCCGAAGA CGGGG TCT CCTCG TTTTCAGTGCAATAA TERM 1214 1667286 - 1667274 - g 88 -9.1 -4.63932 | opp_overlap 1667274 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 1215 1667609 - 1667622 + G 70 -2.3 -4.67353 | overlap 1667610 1667620 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Rmet_1544 1665103 - 1668018 + | transposase Tn3 Rmet_1545 1668588 - 1668181 - | hypothetical protein TERM 1216 1668827 - 1668846 + G 93 -2.8 -5.40072 | opp_overlap 1668828, overlap 1668828 CACGCGCAGCACTAG ATTGACTC GCGC GGGTCAAC TTTTTTTGGAGAGCG TERM 1217 1669011 - 1669028 + G 82 -4.1 -5.0538 | opp_overlap 1669011 TGTCGGCAAGAAGAG CCGGA AATTGAAC TCCGG TTTTTTGAGGTGACG Rmet_1546 1668624 - 1669604 + | LysR family transcriptional regulator Rmet_1547 1669601 - 1669879 + | putative lipoprotein TERM 1218 1669923 - 1669949 + F 100 -14.5 -5.30616 | gap 1 CTTTTTTTCTCGACA CGCCGCAATGCG CCCG CGC-TTGCGGCG TTTTTCTTTGGCTCG TERM 1219 1670345 - 1670377 + G 78 -15.6 -2.73364 | gap 1 TCGATACCGGTGGCG CCATCGCGGGC-GGC AGCG GCCTGCTCGCGGTGG TGGTTGCCATCGGCA TERM 1220 1670877 - 1670856 - g 71 -7.3 -4.13304 | AAACCATTGGGAAAA GACCAGC CACGCGCT GCTGGTC GGGGCCATCCTGCAT Rmet_1548 1670131 - 1672125 + | TRAG protein Rmet_1549 1672122 - 1672586 + | CopG-like DNA-binding TERM 1221 1672724 - 1672751 + G 71 -10.6 -3.59979 | gap 1, overlap 1672725 GAGGTGATGCTGAAT CCCGATCGCACCC TTT GGGTG-GATCGGC TTTCCAGTGGGCGCG TERM 1222 1672725 - 1672750 + G 71 -14.1 -2.75844 | gap 1, overlap 1672724 AGGTGATGCTGAATC CCGATCGCACCC TTT GGGTG-GATCGG CTTTCCAGTGGGCGC TERM 1223 1672923 - 1672964 + G 71 -14.3 -2.73364 | gap 1 TTTTGCCGCCGGCAG CGCCGG-GGCCGGCCTTCGC GCT GCGCAAGCGGGCCATCGGCG TGATTCCGCTGGAGC TERM 1224 1673002 - 1673020 + G 70 -7.3 -4.05446 | opp_overlap 1673001 CGTGGAGGGAATGAT GACCGCC GCACA GGCGGGC TTTCTCGTTCGCGCC Rmet_1550 1672583 - 1673659 + | type II secretion system protein E Rmet_1551 1673656 - 1674039 + | conjugal transfer protein TrbC Rmet_1552 1674036 - 1674308 + | putative conjugal transfer trbD transmembrane protein TERM 1225 1675103 - 1675143 + G 100 -20.5 -3.55444 | opp_overlap 1675125, overlap 1675092 GTACCGCTGGAGCAC GCGCTTTCTCTGCCTCGAC AAA GCCGAGGCGGAGAAAGAGC TTTCCCGCCTGCGCC Rmet_1553 1674324 - 1676753 + | ATPase Rmet_1554 1676750 - 1677475 + | putative conjugal transfer TrbJ signal peptide protein TERM 1226 1677660 - 1677688 + G 80 -11.8 -3.78934 | gap 2, overlap 1677664 GCGAGGACGCTTGCC GCGCCGCCGCCGAA GCC TTC--CGGCGGCGC TTCTTCTCCGGCGAG TERM 1227 1677664 - 1677687 + G 73 -13.8 -2.87146 | overlap 1677660 GGACGCTTGCCGCGC CGCCGCCGAA GCCT TCCGGCGGCG CTTCTTCTCCGGCGA Rmet_1555 1677488 - 1677820 + | putative lipoprotein TERM 1228 1678302 - 1678315 + G 75 -8.1 -4.26076 | GTTGTGCTTCTTCGT GCTGG CGAT CCAGC TTTTCATCACGCTGA Rmet_1556 1677817 - 1679202 + | TrbL/VirB6 plasmid conjugal transfer protein TERM 1229 1679339 - 1679389 + G 70 -13.8 -2.62983 | opp_overlap 1679334 AGGCGAAGAACTGGC GGCTGATGGCCTTCGGCTGCCTGA CGC TCGCGCTGCTGATGGCCGGCGGCC TGGTGTGGCGCTCGG Rmet_1557 1679215 - 1679919 + | conjugal transfer protein TERM 1230 1680179 - 1680161 - g 70 -11.6 -3.40403 | GCCGGCCGACGAGAA GGTGCGCG TCT CGCGCGCC AATGCCGAGGCCCGC TERM 1231 1680263 - 1680297 + G 71 -10.1 -3.64703 | overlap 1680264 1680265 GGATGGCGCGCTCTA TCA-GGTCTATGCGGCC GTG GGCCGCGT-GACCGTGG TTTCGCTCCAGCCGG Rmet_1558 1679916 - 1680917 + | conjugal transfer protein TrbG/VirB9/CagX Rmet_1559 1680920 - 1682188 + | conjugation TrbI-like protein Rmet_1560 1682185 - 1682445 + | hypothetical protein TERM 1232 1682549 - 1682533 - g 88 -9.5 -4.64657 | opp_overlap 1682532 GGAAAGTTGTAAAAA TCGTAGT ATG ACTACGA CTAATTCAAGCAAGC Rmet_1561 1682450 - 1683277 + | hypothetical protein TERM 1233 1683614 - 1683638 + G 76 -13.6 -3.05463 | opp_overlap 1683600, overlap 1683610 ACTTCGTCATGCGTG GCACGGTGCA GCCGG TGCGCCGTGC TTCGCTGACGCCGGT TERM 1234 1684140 - 1684177 + G 84 -16.3 -2.90941 | opp_overlap 1684143 GAAGGTCGATGCGAG GAAGTTTGGCGAGCAGG CTGA CCTGCTCGCCAAGCAGC TATCTGCGCTATGCT TERM 1235 1684174 - 1684143 - g 89 -18.8 -3.16564 | opp_overlap 1684140 GGTCGATGCGAGGAA GTTTGGCGAGCAGG CTGA CCTGCTCGCCAAGC AGCTATCTGCGCTAT Rmet_1562 1683274 - 1684194 + | hypothetical protein TERM 1236 1684439 - 1684476 + F 100 -23.7 -4.72272 | opp_overlap 1684436 1684448 CGCGTAACTGAACTG CACCCCAAAGGTTGGAC ACCC GTTCAACCTTTGGGGTG TTTTTCATGGCGAAG Rmet_1563 1684483 - 1685010 + | ISRSO11-transposase orfA protein TERM 1237 1685802 - 1685834 + G 100 -22.9 -2.95091 | opp_overlap 1685802 1685827 AGGACCAAACTAAAA GGGCTGAGTCCTGTG CAA TACAGGACTCAGCCC TCTATGGCTTAGCCT TERM 1238 1685834 - 1685802 - g 100 -22.2 -4.59376 | opp_overlap 1685802, overlap 1685827 AGGACCAAACTAAAA GGGCTGAGTCCTGT GCAAT ACAGGACTCAGCCC TCTATGGCTTAGCCT Rmet_1564 1685010 - 1685846 + | integrase catalytic subunit Rmet_1565 1687476 - 1685944 - | FAD dependent oxidoreductase Rmet_1566 1688372 - 1687539 - | alpha/beta hydrolase fold TERM 1239 1687984 - 1687973 - G 70 -2.2 -4.64766 | CCCAGAGGTCAAAAA GCAC GCAC ATGC TTCTGCTGCTCTGCA Rmet_1567 1689258 - 1688473 - | TetR family transcriptional regulator TERM 1240 1689143 - 1689169 + g 71 -10.8 -3.63073 | TTCTCTGTTGCCTGG CTGCGGGCTTGC AGG GCGAGTCTGCGG TTCTTGGGGGGTGTC TERM 1241 1689437 - 1689466 + r 74 -13 -3.23692 | opp_overlap 1689437 1689443, overlap 1689443 GTCAGGGGCGGAAAG TCGAAACCCGCA AGTGAC TGCGGGTTTTGA TTGCTGGTGATCGTC TERM 1242 1689443 - 1689460 + r 79 -8.4 -4.46615 | opp_overlap 1689437 1689443, overlap 1689437 GGCGGAAAGTCGAAA CCCGCA AGTGAC TGCGGG TTTTGATTGCTGGTG TERM 1243 1689460 - 1689443 - R 71 -9.1 -3.71649 | opp_overlap 1689443 1689437, overlap 1689437 GGCGGAAAGTCGAAA CCCGCAA GTGA CTGCGGG TTTTGATTGCTGGTG Rmet_1568 1689913 - 1689494 - | transcriptional regulator Rmet_1569 1690630 - 1690034 - | hypothetical protein TERM 1244 1691089 - 1691079 - g 72 -8.2 -4.09685 | CGCGATCCTGGAAAA GGGC GCG GCCC ATGCGAAGGCGCAGG Rmet_1570 1691002 - 1691514 + | hypothetical protein Rmet_1571 1691693 - 1692328 + | hypothetical protein Rmet_1572 1692332 - 1692808 + | putative 6-pyruvoyl tetrahydropterin synthase TERM 1245 1693276 - 1693288 + G 76 -5.5 -4.56597 | TGATGAGTGTGGCCA GTTGC TGC GCGAC TTTTTCGGGGCGCGC Rmet_1573 1692830 - 1693399 + | tRNA-adenosine deaminase ldcA 1693396 - 1694316 + | L,D-carboxypeptidase A Rmet_1575 1694501 - 1696123 + | ABC transporter-related protein TERM 1246 1696152 - 1696184 + T 85 -15.5 -3.19642 | overlap 1696153 GTAAGCCTGCGTCTT TCTCCCCTGTCCCGC AAT GCGGAGCAGGGGAGC TTCATGGCTAGTGCT TERM 1247 1696153 - 1696183 + T 88 -19 -2.51464 | overlap 1696152 TAAGCCTGCGTCTTT CTCCCCTGTCCCGC AAT GCGGAGCAGGGGAG CTTCATGGCTAGTGC Rmet_1576 1696881 - 1696198 - | putative proline-rich protein TERM 1248 1696822 - 1696835 + g 72 -6.7 -4.30177 | CTGATCCAGCTTTCG TTCGC GCGT GCGAA TTTCTTCCTGTCCTG TERM 1249 1698408 - 1698432 + G 76 -14.3 -3.09933 | opp_overlap 1698406 1698405 1698422 GGTGGACATCAATGG CGGCCCGTTCA ACA TGAACGCGCCG TTCGGTGGCTTCAAG Rmet_1577 1697104 - 1698534 + | aldehyde dehydrogenase TERM 1250 1698562 - 1698580 + F 100 -11.7 -5.5353 | opp_overlap 1698562 TCGTCGTATCATCAA TGCCCGG CATGT CCGGGCA TTTTTTATTCCTGTC Rmet_1578 1698626 - 1701091 + | peptidase S45, penicillin amidase Rmet_1579 1701213 - 1701941 + | glutamine amidotransferase Rmet_1580 1701941 - 1702648 + | MOSC domain-containing protein Rmet_1581 1702927 - 1702676 - | hypothetical protein TERM 1251 1702709 - 1702736 + g 70 -6.2 -4.30576 | opp_overlap 1702695 ACGCGCCGTGCCTTC GCGAGTGATCCG CTCC CAGATCACCTGC TTTTCCTCGTCGGAA TERM 1252 1703293 - 1703305 + G 79 -10.5 -4.09864 | overlap 1703288 GATCGATGTGGCGGG CGCGG CGG CCGCG TTTTCGAAGGTCGAT Rmet_1582 1703081 - 1703521 + | phenylacetic acid degradation-related protein Rmet_1583 1704670 - 1703543 - | asparaginase TERM 1253 1704913 - 1704873 - R 100 -19.2 -4.09864 | opp_overlap 1704879, overlap 1704875 1704879 1704902 ACGTATGCCTGAAAA GACAAAGCGGCATCCTCT GCCAG AGAGGATGCCGCTTCGTT CAAGCAGCGAGGACC TERM 1254 1704911 - 1704875 - R 100 -21.8 -3.64716 | opp_overlap 1704879, overlap 1704873 1704879 1704902 GTATGCCTGAAAAGA CAAAGCGGCATCCTCT GCCAG AGAGGATGCCGCTTCG TTCAAGCAGCGAGGA TERM 1255 1704879 - 1704907 + r 95 -19 -3.33696 | opp_overlap 1704879 1704875 1704873 1704902 GCCTGAAAAGACAAA GCGGCATCCTCT GCCAG AGAGGATGCCGC TTCGTTCAAGCAGCG TERM 1256 1704907 - 1704879 - R 100 -19 -4.45168 | opp_overlap 1704879, overlap 1704875 1704873 1704902 GCCTGAAAAGACAAA GCGGCATCCTCT GCCAG AGAGGATGCCGC TTCGTTCAAGCAGCG Rmet_1584 1706138 - 1704945 - | methylitaconate delta2-delta3-isomerase TERM 1257 1705279 - 1705328 + g 74 -12.9 -3.20382 | gap 2, opp_overlap 1705296 GATGCCGTGTACGTC GCCG-GCTTCGCCA-CGAACGCC ACCTTC GGCGTGTGCTGGCGACGCGCGGC TTCGTCGATGTCGCG Rmet_1585 1708750 - 1706153 - | aconitate hydratase TERM 1258 1708772 - 1708811 + r 100 -13.5 -5.07486 | GTGTGAGGACTGTTT CGCGCCGGCCG-GCGCGCC CTGG GGCGCGGACGGC-GGCACG TTTTTCTTGCGGATC TERM 1259 1708830 - 1708855 + r 78 -7.5 -4.65895 | TTCTTGCGGATCTTG CGTGCCTGGGT ATCG AATCAGGCGCG TTTTTCGATCGGCAC Rmet_1586 1710004 - 1708847 - | methylcitrate synthase prpB 1710971 - 1710063 - | 2-methylisocitrate lyase Rmet_1588 1711364 - 1713265 + | putative PAS/PAC sensor protein Rmet_1589 1714699 - 1713410 - | hypothetical protein TERM 1260 1714841 - 1714819 - R 100 -13.5 -5.61596 | opp_overlap 1714819 1714821 AGGCCCACAAAAAAA CAGGTGCCT GGGGG AGGCACCTG TCTTAAGGATCGCCG TERM 1261 1714819 - 1714841 + r 76 -13.5 -3.04144 | opp_overlap 1714819, overlap 1714821 AGGCCCACAAAAAAA CAGGTGCCT GGGGG AGGCACCTG TCTTAAGGATCGCCG Rmet_1590 1715531 - 1714908 - | NAD(P)H dehydrogenase (quinone) Rmet_1591 1715608 - 1716189 + | LysR family transcriptional regulator Rmet_1592 1717206 - 1716178 - | integrase catalytic subunit TERM 1262 1717101 - 1717130 + g 75 -7.7 -4.23781 | overlap 1717096 TAGTGCTCTTGTCAC GCCCCAGGGCCCT GGCT ATGGCGCTGAGGC TTTGCTTTTGCTGCA Rmet_1593 1717257 - 1717793 + | transcriptional regulatory protein Rmet_1594 1717950 - 1718363 + | DoxX Rmet_1595 1718377 - 1718961 + | putative lipoprotein Rmet_1596 1719121 - 1722492 + | DNA translocase FtsK Rmet_1597 1722503 - 1722850 + | cupin 2, barrel Rmet_1598 1722932 - 1724482 + | substrate-binding region of ABC-type glycine betaine transport system Rmet_1599 1724501 - 1725817 + | cytochrome c, class I Rmet_1600 1725814 - 1727646 + | twin-arginine translocation pathway signal Rmet_1601 1728192 - 1727755 - | MarR family transcriptional regulator TERM 1263 1727928 - 1727946 + g 74 -2.4 -4.72272 | gap 1, overlap 1727914 1727928 GGTCGTCGATGCTGC GG-CTGC GTTCCA GCAGGCC TTTTTCCTCGAGCCG TERM 1264 1728527 - 1728499 - H 85 -6.1 -5.06735 | gap 1 GATAAATCAGAAAAA GGGATCGAAGTG TCACTC CA-TTCGACCCC GGCAAACTGAGTAAG Rmet_1602 1728558 - 1729835 + | glyceraldehyde 3-phosphate dehydrogenase TERM 1265 1729862 - 1729889 + T 89 -15.6 -3.28712 | opp_overlap 1729867, overlap 1729863 1729867 TGACGCCACGGATGC TGAAACGGGCCC ATAC GGGCCCGTTTCC TTATGCCACGGCCGG TERM 1266 1729863 - 1729888 + T 88 -19.1 -2.57132 | opp_overlap 1729867, overlap 1729862 1729867 GACGCCACGGATGCT GAAACGGGCCC ATAC GGGCCCGTTTC CTTATGCCACGGCCG TERM 1267 1729867 - 1729884 + T 91 -14.1 -3.9941 | opp_overlap 1729867, overlap 1729863 1729862 CCACGGATGCTGAAA CGGGCCC ATAC GGGCCCG TTTCCTTATGCCACG TERM 1268 1729884 - 1729867 - T 88 -14.1 -3.57792 | opp_overlap 1729867 1729863 1729862 CCACGGATGCTGAAA CGGGCCC ATAC GGGCCCG TTTCCTTATGCCACG Rmet_1603 1730429 - 1729890 - | alkylhydroperoxidase AhpD core TERM 1269 1731289 - 1731313 + G 73 -12.1 -3.30124 | overlap 1731293 TCAGGTTTGCAACGT GTCACGCGCCA CGC TGGCGCGTCGC TTCTCGCAACTGGGC TERM 1270 1731293 - 1731309 + G 70 -13.7 -2.5955 | overlap 1731289 GTTTGCAACGTGTCA CGCGCCA CGC TGGCGCG TCGCTTCTCGCAACT Rmet_1604 1730582 - 1731532 + | AraC family transcriptional regulator Rmet_1605 1731573 - 1732490 + | LysR family transcriptional regulator Rmet_1606 1732538 - 1733098 + | LrgA Rmet_1607 1733100 - 1733825 + | LrgB-like protein Rmet_1608 1735279 - 1733873 - | FAD linked oxidase-like protein TERM 1271 1734575 - 1734547 - G 75 -12.3 -3.5525 | overlap 1734548 AGACACGGCCGGAAA GCGCGCGCTGCGC GTG GCGCAGCAGGCGA ACCACATCGTCGAAA TERM 1272 1734574 - 1734548 - G 78 -15.8 -2.72829 | overlap 1734547 GACACGGCCGGAAAG CGCGCGCTGCGC GTG GCGCAGCAGGCG AACCACATCGTCGAA TERM 1273 1734704 - 1734694 - G 72 -6.8 -4.25104 | opp_overlap 1734699, overlap 1734695 CGCTGCCCACGAAAA CCTG GCG CAGG TCGTAGCCAGCGTTG Rmet_1609 1737100 - 1735391 - | GntR family transcriptional regulator Rmet_1610 1737099 - 1738442 + | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Rmet_1611 1738545 - 1739324 + | extracellular solute-binding protein Rmet_1612 1740227 - 1739334 - | integrase catalytic subunit Rmet_1613 1740520 - 1740224 - | transposase IS3/IS911 Rmet_1614 1740565 - 1741434 + | putative solute-binding transport protein (periplasmic) Rmet_1615 1741484 - 1742506 + | binding-protein-dependent transport systems inner membrane component Rmet_1616 1742503 - 1743342 + | binding-protein-dependent transport systems inner membrane component TERM 1274 1743640 - 1743619 - g 77 -10.9 -3.7795 | gap 1 TGAAACTGGACGAAA CCACGC-TGC TCG GCATGCGTGG CAAGGACATGGCAAT Rmet_1617 1743354 - 1744997 + | ABC transporter-related protein Rmet_1618 1745040 - 1746302 + | 4-aminobutyrate aminotransferase Rmet_1619 1746325 - 1746624 + | hypothetical protein Rmet_1620 1746621 - 1748324 + | acetolactate synthase 2 catalytic subunit Rmet_1621 1748372 - 1749445 + | histone deacetylase superfamily protein Rmet_1622 1749459 - 1750715 + | allantoate amidohydrolase Rmet_1623 1750712 - 1752211 + | aldehyde dehydrogenase (acceptor) Rmet_1624 1753843 - 1752245 - | EmrB/QacA family drug resistance transporter TERM 1275 1754107 - 1754077 - gR 73 -10.4 -3.58343 | CGCACTATGGGGAAA TCAATCAGGCCTGC CTG GCGGACCTGATGGA AGTGGCGCCGATTTC TERM 1276 1754247 - 1754223 - gR 85 -7.7 -4.66163 | AGCGTGACGGAAAAA GCGGAGCAGGC ACT GCATGCCGCGC GCGAGGTGGGGGATG Rmet_1626 1755750 - 1754314 - | periplasmic sensor signal transduction histidine kinase Rmet_1625 1753926 - 1754396 + | MarR family transcriptional regulator TERM 1277 1755733 - 1755743 + gT 75 -6.8 -4.4078 | overlap 1755726 1755725 CGTGATCTGCAGCCT CAGG CTG CCTG TTTTCATTGGCGCGC Rmet_1627 1756439 - 1755747 - | two component transcriptional regulator TERM 1278 1757320 - 1757296 - g 70 -11.4 -3.31144 | gap 1 CTGGGATCGCCAGAA CGGCGCGG-GC ACCA GCACCACGCCG GCTGACAGCGTCGAC Rmet_1628 1756658 - 1757722 + | porin TERM 1279 1757762 - 1757805 + T 100 -9.4 -6.17292 | gap 1, overlap 1757769 GACCGTCGTGGTGGA CG-GTCGCCCGGCGGTGCGAG GGG CTCGCGCCGCCGGTTTTTGCG TTTTTTTTTGCGTTT TERM 1280 1757769 - 1757797 + T 100 -23.9 -4.97888 | overlap 1757762 GTGGTGGACGGTCGC CCGGCGGTGCGAG GGG CTCGCGCCGCCGG TTTTTGCGTTTTTTT Rmet_1629 1758327 - 1757842 - | glutathione-dependent formaldehyde-activating, GFA Rmet_1630 1758600 - 1759814 + | sodium/hydrogen exchanger Rmet_1631 1760807 - 1759872 - | LysR family transcriptional regulator Rmet_1632 1761718 - 1760807 - | 2-hydroxy-3-oxopropionate reductase TERM 1281 1761777 - 1761754 - R 73 -10.2 -3.64103 | gap 1, opp_overlap 1761754 1761766, overlap 1761755 GAGTCACACGGTAAA GC-GCTCGCGC AAC GCGCGTGCCGC GTCGCGCAGCAGTGC TERM 1282 1761788 - 1761755 - R 73 -13.2 -2.7814 | gap 1, opp_overlap 1761754 1761766, overlap 1761754 AGTCACACGGTAAAG CGCTCGCGCAACGCG CGTGC CGCGTCGCGC-AGCA GTGCGTTGTCGATAC Rmet_1633 1762527 - 1761742 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase Rmet_1634 1763637 - 1762543 - | hypothetical protein Rmet_1635 1764641 - 1763640 - | hypothetical protein TERM 1283 1764407 - 1764420 + g 76 -9.5 -4.07885 | AGCCGATGTTGCCGC CCGCG CCCG CGCGG TTTTCCACCACGATC Rmet_1636 1764891 - 1766570 + | acetolactate synthase 2 catalytic subunit TERM 1284 1766647 - 1766669 + T 100 -16.3 -4.54727 | GAAGAGCGTTGCCTG CGGCCGGAC TTCGT GTCCGGCCG TTTTCATTTGGGCAG Rmet_1637 1766946 - 1766629 - | hypothetical protein TERM 1285 1767398 - 1767425 + H 72 -12 -3.29558 | gap 1, overlap 1767396 GATCTCCGACTTCTC CGGC-ATGGGCAG GAC CTGCCCACCGCCG TCTTCTGACTTCTGG Rmet_1638 1767489 - 1770992 + | pyruvate carboxylase TERM 1286 1771072 - 1771055 - T 100 -14.1 -5.1287 | GCCAGACGCAAAAAA GGCCCGC CAAG GCGGGCC TGCAATGACGAAGGA Rmet_1639 1772230 - 1771127 - | porin Rmet_1640 1773845 - 1772607 - | putative UreA/short-chain amide ABC transporter Rmet_1641 1774986 - 1773928 - | hypothetical protein TERM 1287 1775096 - 1775070 - R 82 -9.4 -4.39166 | overlap 1775071 GTTTATAGACGAAAA GGCGACGCAAGA TCA TTTTGCGTCGCA TCAAAACTATGCGGA TERM 1288 1775095 - 1775071 - R 74 -12.9 -3.23018 | overlap 1775070 TTTATAGACGAAAAG GCGACGCAAGA TCA TTTTGCGTCGC ATCAAAACTATGCGG TERM 1289 1775183 - 1775151 - R 86 -14.2 -3.54424 | opp_overlap 1775157, overlap 1775152 1775157 CGGGAGGCCCGGAAA GCAAAACGCCGGTC TCGTG GACCGGCGTTTCGG CAAGGTGACGGTGCT TERM 1290 1775182 - 1775152 - R 86 -17.7 -2.72511 | opp_overlap 1775157, overlap 1775151 1775157 GGGAGGCCCGGAAAG CAAAACGCCGGTC TCGTG GACCGGCGTTTCG GCAAGGTGACGGTGC TERM 1291 1775177 - 1775157 - R 100 -14 -4.54727 | opp_overlap 1775157, overlap 1775152 1775151 GCCCGGAAAGCAAAA CGCCGGTC TCGTG GACCGGCG TTTCGGCAAGGTGAC TERM 1292 1775157 - 1775177 + r 90 -14.7 -3.53811 | opp_overlap 1775157 1775152 1775151 GCCCGGAAAGCAAAA CGCCGGTCT CGT GGACCGGCG TTTCGGCAAGGTGAC Rmet_1642 1775531 - 1775217 - | hypothetical protein Rmet_1643 1776067 - 1775618 - | hypothetical protein Rmet_1644 1777904 - 1776204 - | beta-lactamase-like protein Rmet_1645 1780365 - 1777996 - | DNA polymerase II TERM 1293 1780023 - 1780081 + g 95 -16.7 -4.18494 | opp_overlap 1780009 1780024, overlap 1780024 ACCGCTCCATCAGAT AGCGCTCTGGCGG-GCGGACGTCGGCCTC GTA GACGCTGACGCCCGCGTCGC-GGAGCGCC TTTTCAATCCGCATG TERM 1294 1780080 - 1780024 - G 81 -15.8 -2.94099 | opp_overlap 1780023 1780024, overlap 1780009 CCGCTCCATCAGATA GCGCTCTGGCG-GGCGGACGTCGGCCTC GTA GACGCTGACGCCCGCGTCGCG-GAGCGC CTTTTCAATCCGCAT TERM 1295 1780024 - 1780080 + g 100 -20.2 -3.10775 | opp_overlap 1780009 1780024, overlap 1780023 CCGCTCCATCAGATA GCGCTCTGGCGG-GCGGACGTCGGCCTC GTA GACGCTGACGCCCGCGTCGC-GGAGCGC CTTTTCAATCCGCAT Rmet_1646 1780504 - 1782177 + | MscS mechanosensitive ion channel Rmet_1647 1782924 - 1782196 - | putative transmembrane protein Rmet_1648 1783520 - 1782921 - | sigma-24 (FecI-like) Rmet_1649 1783672 - 1784292 + | hypothetical protein Rmet_1650 1785863 - 1784421 - | hypothetical protein Rmet_1651 1787430 - 1785985 - | sensory histidine kinase CreC TERM 1296 1786586 - 1786631 + g 80 -12 -3.76224 | gap 3, opp_overlap 1786593, overlap 1786595 GTCGGCATGTCCTCC TGAAGCAGTTCCGCCGCGCCGCC GAT GGCGGC-CAGCGGG-CT-CTTCA TTTCGTGCGTCAGCG TERM 1297 1787317 - 1787337 + g 70 -5.3 -4.45544 | overlap 1787319 CACGAGGGTATCTTC CATGGCCTG ACG CACGCCAGG TTTTACTTCCTGGAC Rmet_1652 1788147 - 1787449 - | DNA-binding response regulator CreB Rmet_1653 1789384 - 1788170 - | monooxygenase, FAD-binding Rmet_1654 1790029 - 1789472 - | SmpA/OmlA Rmet_1655 1790455 - 1790273 - | hypothetical protein Rmet_1656 1790794 - 1791780 + | glutathione S-transferase-like protein TERM 1298 1791921 - 1791899 - T 82 -9 -4.38712 | GCGACCGCCATAAAA GGCCCGCCGG CGA CCGGGGAACC TCCGGTGGGTGAAGG Rmet_1657 1793579 - 1792158 - | transmembrane prediction TERM 1299 1793173 - 1793153 - G 72 -8.9 -4.15044 | opp_overlap 1793172, overlap 1793156 TCTGTGCCGAATAAA GTAGCAGCG GCG CGCCGCTGC GGACAAACAGTCCGG TERM 1300 1793173 - 1793156 - G 72 -12.7 -3.10244 | opp_overlap 1793172, overlap 1793153 GTGCCGAATAAAGTA GCAGCGG CGCG CCGCTGC GGACAAACAGTCCGG Rmet_1658 1794161 - 1793592 - | hypothetical protein TERM 1301 1793710 - 1793696 - G 84 -12.8 -3.72027 | opp_overlap 1793696 1793695 AGGTTCCAGGAAGAA GGGCGG TGG CCGCCC CTTTGGCATCTAGGT TERM 1302 1794298 - 1794313 + r 79 -7.6 -4.52589 | TCGGATCCCCTGCGG TTCGGA ATTG TCCGAA TTTTATGTCGGAAAA Rmet_1659 1794761 - 1794651 - | addiction module toxin, Txe/YoeB Rmet_1660 1795596 - 1794805 - | transposase TERM 1303 1795146 - 1795166 + g 100 -18.3 -4.42386 | CATTCACGGCGTGCA GCGCGGCCA GGT TGGCCGCGC TTTTGTCGATAGCCA TERM 1304 1795203 - 1795213 + g 72 -8.2 -4.11216 | CAGGAGCGCCGTTCT GGCC GAT GGCC TTTTCGAAGTAACGC TERM 1305 1796344 - 1796362 + r 76 -12.4 -3.28712 | opp_overlap 1796339 1796343, overlap 1796347 ATTCACCGAATCCAC GCTGGCGT GGC GCGCCAGC TTGTGCGCCAGCGCC TERM 1306 1796347 - 1796377 + r 74 -12.6 -3.14344 | gap 1, opp_overlap 1796339 1796343, overlap 1796344 CACCGAATCCACGCT GGCG-TGGCGCGC CAGCTT GTGCGCCAGCGCC TTGATCGCGACAATC TERM 1307 1796443 - 1796425 - R 82 -12.4 -3.62046 | CTAGCGCTCGAAGAA GCGCCTGG CCT CCAGGCAC AAGCACATGGCGAAG Rmet_1663 1798252 - 1797425 - | pili assembly chaperone Rmet_1664 1799744 - 1798317 - | hypothetical protein TERM 1308 1799097 - 1799118 + g 89 -2.2 -5.37593 | opp_overlap 1799097 CGTACACTGAAACAT CTCCAGCT TGTATT GGCTGAAG TTTTTTGCTTTGACG TERM 1309 1799452 - 1799435 - G 71 -9.1 -3.767 | TATTGATTGACGAAA CGCCGCT TCCA AGCAGCG TGCCATCTGGTACCA Rmet_1665 1802540 - 1799751 - | fimbrial biogenesis outer membrane usher protein TERM 1310 1802460 - 1802482 + g 78 -4.1 -4.79352 | opp_overlap 1802474, overlap 1802475 AATGCCTAGCGCACT CAGTATTGC GGAAA GCAGAACTG TTTTGTTATGCCTCC Rmet_1666 1803300 - 1802542 - | pili assembly chaperone Rmet_1667 1803919 - 1803380 - | fimbrial protein TERM 1311 1805297 - 1805287 - g 72 -8.2 -4.11216 | GCGTTACTTCGAAAA GGCC ATC GGCC AGAACGGCGCTCCTG TERM 1312 1805354 - 1805334 - g 100 -18.3 -4.42386 | TGGCTATCGACAAAA GCGCGGCCA ACC TGGCCGCGC TGCACGCCGTGAATG Rmet_1668 1804904 - 1805929 + | transposase TERM 1313 1805988 - 1806017 + G 75 -10.1 -3.87641 | gap 1 TCACGTTCTGCTTGC CTGGCA-GTGATCG TTG CGATTGCATGCCAG TTTGTGGCAGATATT TERM 1314 1806182 - 1806207 + G 73 -6.2 -4.36914 | gap 2, overlap 1806184 TTTGTTCAAGCCCGA TG-GC-CCGGGT CCCT ACCCGGTGCTCA TTTTCTCCCACGGCC Rmet_1669 1805907 - 1806902 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase Rmet_1670 1807126 - 1807230 + | hypothetical protein Rmet_1671 1809087 - 1807369 - | Poly(R)-hydroxyalkanoic acid synthase, class I TERM 1315 1807425 - 1807453 + g 80 -8.8 -4.4078 | gap 2, overlap 1807424 CGATAGGCTGGAATC GGCTGTCGCCGAGC TTC GC-CGGCGCC-GCC TTTTGCTTGCCGCCG TERM 1316 1808064 - 1808051 - G 70 -5.9 -4.24342 | TCGTCGAGGAAGAAA CCGAG GTCA CCCGG GTCGGTAAAGTCGAG TERM 1317 1808821 - 1808832 + g 84 -7.2 -4.72272 | overlap 1808817 GTCCTTCACCGCGAA CCGG CGGT CCGG TTTTTGGTCGGCACC TERM 1318 1809009 - 1808996 - G 71 -8.1 -4.18197 | AGCGGCGAGGGAAAA CCGCT CAGC AGCGG ATTGGCATGCGGTGT Rmet_1672 1809524 - 1809084 - | MaoC-like dehydratase TERM 1319 1809572 - 1809609 + H 78 -13.5 -3.14136 | gap 1 GGCGCCAGATCCAGG CGATACCCGCACGCCG GCGCGCG CGGCGC-CGGGTATCG TTCAATGGTTGGTCG Rmet_1673 1809739 - 1810062 + | hypothetical protein TERM 1320 1810269 - 1810308 + G 71 -10.1 -3.60792 | gap 3, opp_overlap 1810281 1810282 CAGCAGGACGCGTTG CCCG-TGCGCAAAGGCGAGG GAC CCTCGC-TG-GCGCAGCGGG TTTCCGCCTTGGAGC TERM 1321 1810489 - 1810503 + G 77 -12.8 -3.37245 | overlap 1810481 1810480 GCGCCGTCGCCGCCA CGGCGG TTT CCGCCG TTCCTATTCCCGTGG Rmet_1674 1810134 - 1813415 + | membrane protein-like protein TERM 1322 1813437 - 1813482 + G 100 -22 -2.52516 | overlap 1813434 1813437 1813481 GCGTTGGATTCTGCT GGCTCTGCATGTGCCTGCTG CTTGCT CCGCAGGCACATGCAGAGCG CTTCGTGGTGGAGAC TERM 1323 1813437 - 1813483 + G 100 -21.8 -3.21099 | gap 1, overlap 1813434 1813437 1813481 GCGTTGGATTCTGCT G-GCTCTGCATGTGCCTGCTG CTTGCT CCGCAGGCACATGCAGAGCGC TTCGTGGTGGAGACA Rmet_1675 1813412 - 1814740 + | putative transmembrane protein Rmet_1676 1815062 - 1815493 + | hypothetical protein Rmet_1677 1815541 - 1815981 + | hypothetical protein Rmet_1678 1816555 - 1817031 + | hypothetical protein Rmet_1679 1817324 - 1817160 - | phage integrase Rmet_1680 1817367 - 1817708 + | hypothetical protein Rmet_1681 1818947 - 1817805 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1324 1819885 - 1819853 - g 73 -11.9 -3.35679 | overlap 1819816 CGGGCGCAGCCAGAA CAGAGCGGCCGCCAG GCC CTGATGACCGCGCTG CGACACCCTCCGTTC Rmet_1682 1819238 - 1820473 + | major facilitator transporter Rmet_1683 1821753 - 1820560 - | ABC-type multidrug transport system permease component TERM 1325 1820641 - 1820614 - G 80 -5.4 -4.79223 | CGATATCACGAAAAA CGCCGCCCCGAT CACG AACAGCGCGACG AACTGCACCCACACG Rmet_1684 1824512 - 1821753 - | response regulator receiver domain-containing protein TERM 1326 1823676 - 1823697 + g 77 -8.7 -4.25104 | CATGGTCAGGTCTTT CGCCTCGAT GGCG ATCGGGGTG TTTTCGTCCACGGCC Rmet_1685 1825590 - 1824523 - | secretion protein HlyD Rmet_1686 1827153 - 1825603 - | RND efflux system, outer membrane lipoprotein, NodT TERM 1327 1827211 - 1827189 - R 81 -4.7 -5.00616 | CGCGCCGTGAAAAAA TCCGGGGGC ATGGG GCACGCGGA GTGCCCCGTCAGGGT TERM 1328 1827263 - 1827279 + r 81 -5.2 -4.87133 | CTGCGTGGGGACTTT GATTCA CGACA TGAATC TTTTATTTGGCGAAT Rmet_1687 1827744 - 1827364 - | hypothetical protein Rmet_1688 1828105 - 1829745 + | diguanylate cyclase Rmet_1689 1830845 - 1829811 - | diguanylate phosphodiesterase Rmet_1690 1831248 - 1831565 + | flagellar transcriptional activator Rmet_1691 1831581 - 1832222 + | transcriptional activator FlhC TERM 1329 1832368 - 1832350 - T 100 -14.6 -5.75945 | ATTGTGCAAAAAAAA TGCCCTCC AGA GGAGGGCA TAAACGCGGATATAG Rmet_1692 1833276 - 1832542 - | Crp/FNR family transcriptional regulator TERM 1330 1833372 - 1833407 + r 82 -9 -4.39696 | gap 1, overlap 1833373 AGGCGGTGGCGGACA CCTGGGTGGTGGCGT GTGCTTG ACGCCACC-CCCGGC TTTATTGCTTTGGAC TERM 1331 1833373 - 1833406 + r 74 -12.5 -3.23094 | gap 1, overlap 1833372 GGCGGTGGCGGACAC CTGGGTGGTGGCGT GTGCTTG ACGCCACC-CCCGG CTTTATTGCTTTGGA Rmet_1693 1834675 - 1833452 - | methyl-accepting chemotaxis sensory transducer TERM 1332 1834700 - 1834687 - R 72 -2.4 -4.7373 | opp_overlap 1834671 TCATTTTATGAAAAA CGAA TCTTCT TTCG CTTGCATTTGTATGG Rmet_1694 1836302 - 1835229 - | hypothetical protein TERM 1333 1836498 - 1836480 - g 72 -6.6 -4.25104 | opp_overlap 1836483, overlap 1836482 1836483 CTGGGCGCAGGAAAA TAGCGCCG GCC CGGCGTCA TTCAAGCCAGAGGAG TERM 1334 1836520 - 1836541 + G 72 -8.7 -3.97947 | gap 1, opp_overlap 1836513 CCAGAGGAGCTCGAA GCGCTGGTCG CGC CGATC-GCGC TTTATCCTGACTCCG Rmet_1695 1836400 - 1837869 + | hypothetical protein Rmet_1696 1837906 - 1838820 + | hypothetical protein TERM 1335 1838888 - 1838911 + F 100 -9.6 -6.34424 | opp_overlap 1838891, overlap 1838891 TCTGACTAGTGAGAT AAAGCTCGCA GTAA TGCGAGCTTC TTTTTTTTTTGCACC TERM 1336 1838891 - 1838908 + F 100 -11.3 -5.20756 | opp_overlap 1838891, overlap 1838888 GACTAGTGAGATAAA GCTCGCA GTAA TGCGAGC TTCTTTTTTTTTTGC TERM 1337 1838908 - 1838891 - f 84 -11.3 -4.07124 | opp_overlap 1838891 1838888 GACTAGTGAGATAAA GCTCGCA GTAA TGCGAGC TTCTTTTTTTTTTGC TERM 1338 1839163 - 1839175 + F 76 -10.5 -3.73068 | TGCTATGTTCGCGTG CGGCG ACA CGCCG TTATTCCGTTCCCGG Rmet_1697 1839378 - 1840331 + | histidine kinase Rmet_1698 1840342 - 1840917 + | two component LuxR family transcriptional regulator Rmet_1699 1841040 - 1841414 + | response regulator receiver domain-containing protein Rmet_1700 1841544 - 1841798 + | hypothetical protein TERM 1339 1842204 - 1842186 - g 76 -13.8 -3.10905 | CCAGAAGCCATTCAA GGCCGCGC TGG ACGCGGCC ATGGCCGAACTGGCG Rmet_1701 1841878 - 1843116 + | secretion protein HlyD TERM 1340 1844237 - 1844261 + G 76 -13.6 -3.16191 | GGTCCCGATTCTGGC CGTGCCGGTG TCGAT CATCGGCACG TTCATGGCCATGTCG Rmet_1702 1843113 - 1846304 + | hydrophobe/amphiphile efflux-1 HAE1 Rmet_1703 1846301 - 1847761 + | RND efflux system, outer membrane lipoprotein, NodT TERM 1341 1847953 - 1848001 + G 71 -13 -3.01712 | gap 1 ACCCAGCCGCCGTGT C-CTCGGCGCCGCCGCCTCCCAG TGGT CCGGCAGTCGGCGGTGGCGAGCG TGTTGGCGGCGCCGC Rmet_1704 1847766 - 1848239 + | hypothetical protein Rmet_1705 1848280 - 1848867 + | hypothetical protein Rmet_1706 1848904 - 1849290 + | hypothetical protein TERM 1342 1849309 - 1849353 + T 100 -22.3 -3.53091 | gap 1, opp_overlap 1849316 ATTGAAGATCCGATG CCGCAAACTTCAGGGGCCGC AATAAC GCGGCCCCTGAAGAT-GCGG TTTGCGCCCGGAACT TERM 1343 1849347 - 1849316 - T 100 -22.4 -3.55563 | opp_overlap 1849309 ATCCGATGCCGCAAA CTTCAGGGGCCGCA ATAA CGCGGCCCCTGAAG ATGCGGTTTGCGCCC Rmet_1707 1850186 - 1849368 - | hypothetical protein Rmet_1708 1850277 - 1850648 + | hypothetical protein Rmet_1709 1850698 - 1851864 + | hypothetical protein TERM 1344 1852366 - 1852314 - g 75 -12 -3.53224 | opp_overlap 1852334 GACTTCTGGGGGAAA TTCGCCCGGGCGATCG-AGTCCGCCG ATG CCGCGTACTTCG-CGGCCCAGGCGAA TCACGAGAACGTACT Rmet_1710 1851867 - 1853426 + | RND efflux system, outer membrane lipoprotein, NodT TERM 1345 1854046 - 1854019 - g 75 -9.8 -3.97511 | gap 1 CAGCGAAGAGAACAA CGCCA-AGCTGCG CAG CGCCGCTGCGGCG GTTGAAAAGGCGGAG Rmet_1711 1853423 - 1854559 + | secretion protein HlyD Rmet_1712 1854549 - 1855613 + | hypothetical protein Rmet_1713 1855630 - 1856079 + | Ion transport 2 Rmet_1714 1856506 - 1856084 - | hypothetical protein Rmet_1715 1857630 - 1856503 - | AraC family transcriptional regulator Rmet_1716 1857711 - 1858691 + | zinc-binding alcohol dehydrogenase Rmet_1717 1858702 - 1859550 + | taurine catabolism dioxygenase TauD/TfdA Rmet_1718 1859568 - 1861214 + | AMP-dependent synthetase and ligase TERM 1346 1861238 - 1861256 + F 100 -17.4 -5.95539 | CATGGAGTTAGGGAG CGCCCCGC ACT GCGGGGCG TTTTTTTATTTGGCG Rmet_1719 1861429 - 1862412 + | hypothetical protein Rmet_1720 1863370 - 1862438 - | IclR family transcriptional regulator TERM 1347 1863500 - 1863470 - gH 76 -14.1 -3.01712 | opp_overlap 1863464 1863496, overlap 1863449 GCGCGCGCTGGAACA GCGAGC-CGTCGACG CCT CGTCG-CGTGCTCGC TCAAGCTTTCAGAAA TERM 1348 1863868 - 1863849 - gH 72 -3.5 -4.59109 | opp_overlap 1863850, overlap 1863850 TACAGGGTCGAAAAA TTCGTGC GAGGCG GCACGAT CTTCTACAACCTGGC TERM 1349 1864956 - 1864981 + GH 78 -10.4 -3.89614 | opp_overlap 1864938 1864939 GCCGCCCGCACGCCC CGCGCGATGC AGTTCG GCGTTGCGCG TTTCTGACGCTTCCG Rmet_1721 1863369 - 1864988 + | carboxyl transferase Rmet_1722 1865058 - 1866224 + | acyl-CoA dehydrogenase-like protein TERM 1350 1867009 - 1866997 - g 79 -10.5 -4.07568 | opp_overlap 1867005, overlap 1866975 1866974 GGCCTTCCGCGAAAA GCGCG AAG CGCGC TGGGTCACGCGATTT Rmet_1723 1866233 - 1867066 + | enoyl-CoA hydratase/isomerase Rmet_1724 1867095 - 1869092 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 1351 1870872 - 1870890 + G 72 -8.8 -4.1721 | CATTGGGCAAGAGCT TCGCGCAG ACG CTGCTCGA TTTTCCGCTGTCGGT Rmet_1725 1869089 - 1870972 + | hypothetical protein Rmet_1726 1871006 - 1872019 + | hypothetical protein TERM 1352 1872105 - 1872085 - T 100 -14 -5.40464 | opp_overlap 1872083 1872104 GACCACAAAGAAAAA CGGGCTGC CTTGC GCAGCCCG CGTCCATTCCATGGT Rmet_1727 1873346 - 1872129 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1353 1874337 - 1874368 + r 70 -10.8 -3.452 | gap 1, opp_overlap 1874328 AGGACATCCTGTTGT CGGC-CCTGGTCCGC ATG GCCGAACAGGCGCCG TTCTACATATTTACG TERM 1354 1875117 - 1875097 - R 88 -14 -3.60074 | GAGAAACCGTGGAAA GCGCCGCA AGGAG TGCGGCGC GTGGGTCAGGATGGC Rmet_1730 1875323 - 1875123 - | hypothetical protein Rmet_1731 1876390 - 1875332 - | hypothetical protein TERM 1355 1875760 - 1875786 + g 71 -10 -3.65902 | GCGGCCCCTTGTAGG CGCCGGCGCGCA CCA TGCGTTCCAGCG TTTCCATCGCGTGGA Rmet_1732 1876510 - 1877532 + | AraC family transcriptional regulator TERM 1356 1877579 - 1877548 - T 100 -13 -4.77165 | overlap 1877550 TCGCCCAGAAGAAAA TCGGCCACACGGAC GGAG GCCCGTGCGACCAA AGGCGAACATCGAAT TERM 1357 1877577 - 1877550 - T 72 -13.4 -2.67008 | overlap 1877548 GCCCAGAAGAAAATC GGCCACACGGAC GGAG GCCCGTGCGACC AAAGGCGAACATCGA Rmet_1733 1878861 - 1877665 - | porin Rmet_1734 1879542 - 1878973 - | hypothetical protein Rmet_1735 1880901 - 1879570 - | major facilitator transporter TERM 1358 1880081 - 1880051 - G 76 -6.1 -4.4891 | gap 2 CCGATCAGCACAAAA GCGGCG-GCA-GTCA GGC CGGCTTGCGCGCCGC TCATGCCGTAGTAGC Rmet_1736 1881189 - 1881746 + | cytochrome B561 Rmet_1737 1883219 - 1881726 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_1738 1885199 - 1883223 - | glycosyl transferase family protein TERM 1359 1885113 - 1885055 - G 82 -15.4 -3.12142 | gap 3, overlap 1885053 1885088 GCCATACGTAATAGA CCAGCAGCAGCACGCCGG-CCGC-GGC GCCGAAAA GCCAGCGGTCCAGGGTGC-GCTGCCGG TCGCCGCGCAGGCAG Rmet_1739 1886569 - 1885214 - | hypothetical protein TERM 1360 1886244 - 1886297 + g 73 -12.4 -3.40403 | gap 2, opp_overlap 1886244, overlap 1886243 ACGCCATCGGCAATA CGC-CGCGCC-GCATCGCGCTGGCCG CAGG CGATCAGTGCGATGCCGGCCAGCGCG TTGTCGTAGACGAAA TERM 1361 1886295 - 1886244 - G 81 -15.9 -3.04263 | opp_overlap 1886243 1886244 ACGCCATCGGCAATA CGCCGCGCC-GCATCGCGCTGGCCG CAGG CGATCAGTGCGATGCCGGC-CAGCG CGTTGTCGTAGACGA Rmet_1740 1887971 - 1886640 - | hypothetical protein TERM 1362 1887999 - 1887989 - H 74 -6.8 -4.36914 | overlap 1887991 CGCCTCCGGATAAAA GGTG GGC CACC CGAGATAGCCAAAGC Rmet_1741 1888432 - 1888863 + | hypothetical protein Rmet_1742 1889076 - 1889915 + | hypothetical protein TERM 1363 1889980 - 1889968 - g 73 -9.1 -3.93782 | GGATCGAACAGGAAA TGCGG CCG CCGCA CCGTACTGTCCGAGT TERM 1364 1890226 - 1890236 + G 76 -2.4 -4.96848 | overlap 1890225 CCTCAGTCTCGATCC GGGG CAT CCGC TTTTTCTGTCGACAC Rmet_1743 1889915 - 1890772 + | AraC family transcriptional regulator Rmet_1744 1892658 - 1890805 - | acyl-CoA synthetase Rmet_1745 1893640 - 1893095 - | hypothetical protein TERM 1365 1893660 - 1893632 - G 71 -3.7 -4.49314 | overlap 1893634 GATCAGGAAAAAGAA TGGCTTCAAGCGG CCT CCGGTCGATGCGA TAACGTAACGACAAG TERM 1366 1893936 - 1893914 - g 74 -10.5 -3.7941 | overlap 1893915 GATCGTGGACAACAA GCGCCAGGG GCTCG CCCTGGCGA GCACGGCCGAAGGCC TERM 1367 1893935 - 1893915 - g 73 -14 -2.87325 | overlap 1893914 ATCGTGGACAACAAG CGCCAGGG GCTCG CCCTGGCG AGCACGGCCGAAGGC Rmet_1746 1893801 - 1894040 + | putative transposase protein Rmet_1747 1894539 - 1894006 - | hypothetical protein TERM 1368 1894576 - 1894592 + r 74 -11.5 -3.53767 | opp_overlap 1894576 CCAGAAAGCAAAAAA CCCGCCT TCT GGGCGGG TTGTGATTGCGTATT TERM 1369 1894592 - 1894576 - R 100 -10.8 -5.42514 | opp_overlap 1894576 CCAGAAAGCAAAAAA CCCGCC TTCTG GGCGGG TTGTGATTGCGTATT Rmet_1748 1896234 - 1894768 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_1749 1897430 - 1896234 - | secretion protein HlyD Rmet_1750 1900624 - 1897427 - | acriflavin resistance protein TERM 1370 1897462 - 1897475 + g 71 -8.1 -4.07568 | TCACTGTGTTTTGGC GCGAG TTGG CTCGC TTTTCGAGCCAACCA TERM 1371 1898631 - 1898621 - G 80 -5.4 -4.83169 | overlap 1898624 ATCGCCGGACAAAAA TGAG AAG CTCA CTCCTGGGAATGCCA Rmet_1751 1900803 - 1901477 + | two component heavy metal response transcriptional regulator Rmet_1752 1901477 - 1902886 + | heavy metal sensor signal transduction histidine kinase Rmet_1753 1903173 - 1903475 + | hypothetical protein Rmet_1754 1904224 - 1903697 - | hypothetical protein Rmet_1755 1905450 - 1904452 - | twin-arginine translocation pathway signal TERM 1372 1905211 - 1905232 + g 81 -9.4 -4.21194 | overlap 1905214 GCTGGCGGTGCCGAT CGAGCCCG ATGCGC CGGGCTTG TTTTCGATGATGACC TERM 1373 1905214 - 1905229 + g 75 -7.5 -4.22883 | overlap 1905211 GGCGGTGCCGATCGA GCCCG ATGCGC CGGGC TTGTTTTCGATGATG Rmet_1756 1906696 - 1905485 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1374 1906414 - 1906452 + g 74 -11.7 -3.57462 | gap 1 TGACCACGTCGCACT GCGCAGCCAGT-TGGCGT GCCA GCGCCAGACCGGCTTCGC TTTGCAGATCGAGTG TERM 1375 1907191 - 1907205 + G 70 -5.7 -4.21194 | CGATGTACCCGGCCA TCACG CTCAA CGTGA TTTTCGATAATGACA Rmet_1757 1906833 - 1907726 + | LysR family transcriptional regulator Rmet_1758 1908007 - 1908927 + | hypothetical protein Rmet_1759 1909327 - 1910991 + | ABC transporter-related protein Rmet_1760 1912208 - 1911300 - | alpha/beta hydrolase fold TERM 1376 1911724 - 1911709 - G 72 -9 -4.05446 | CCGCCGAAGGAGAAA TGCCAG AGCG CTGGCA TTCGGACGATCTGTT Rmet_1761 1912492 - 1913148 + | hypothetical protein Rmet_1762 1914786 - 1913194 - | integral membrane protein TerC Rmet_1763 1915003 - 1915452 + | hypothetical protein TERM 1377 1915993 - 1915958 - g 71 -14 -2.70932 | gap 1, opp_overlap 1915965 1915968 CGGCCCGCCGAAGTA TCGCGCGCCATCGACGC GAT GGGCCGA-GACGCGCGA TTCGCGTCGATGCTT Rmet_1764 1915577 - 1916599 + | hypothetical protein Rmet_1765 1917006 - 1916608 - | hypothetical protein TERM 1378 1916766 - 1916742 - G 81 -9.2 -4.2803 | GACTGGAATTGAAAA GCCCCGCTGG GTCTT CCAGCGACGC CCCCTTGGCAAAGGT TERM 1379 1916846 - 1916823 - G 86 -14.6 -3.48593 | opp_overlap 1916814 1916814 CACCCGTGCAGAGAA TGCCGGCGTG CGAC CACACCGGCA CGCCCCGCCATTTCC Rmet_1766 1917382 - 1918764 + | glutamate decarboxylase TERM 1380 1918779 - 1918811 + T 100 -26.4 -5.75538 | opp_overlap 1918798 ATGAGTGGATGACTG GCCGGCCGAGGGCA CGCAA TGCCCTCGGCCGGC TTTTTCTTTTTTGGC Rmet_1767 1919716 - 1918832 - | LysR family transcriptional regulator Rmet_1768 1919853 - 1920782 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1381 1920858 - 1920805 - T 100 -21.2 -3.02324 | gap 2, opp_overlap 1920817, overlap 1920807 TGGATTGAAATGACA GACGGCCACGTCCAGATGCCAGCGCA TGGT TGCGC-GG-ATCTGTTCGTGGCCGTC ATGCGCGGGACACAA TERM 1382 1920856 - 1920807 - T 89 -18 -3.06483 | gap 2, opp_overlap 1920817, overlap 1920805 GATTGAAATGACAGA CGGCCACGTCCAGATGCCAGCGCA TGGT TGCGC-GG-ATCTGTTCGTGGCCG TCATGCGCGGGACAC TERM 1383 1920908 - 1920874 - T 74 -11.5 -3.48395 | gap 1, overlap 1920877 ATGCGCGGGACACAA GCAGGCGATGAAACGC CCTA GCGTT-CATCGCCCCC AAGCAGTGGCTGGCA TERM 1384 1920905 - 1920877 - T 75 -14 -2.88822 | gap 1, overlap 1920874 CGCGGGACACAAGCA GGCGATGAAACGC CCTA GCGTT-CATCGCC CCCAAGCAGTGGCTG Rmet_1769 1921916 - 1920924 - | hypothetical protein Rmet_1770 1923456 - 1922029 - | amidase Rmet_1771 1923995 - 1923552 - | putative lipoprotein Rmet_1772 1924221 - 1924787 + | GCN5-related N-acetyltransferase Rmet_1773 1924806 - 1925237 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_1774 1926178 - 1925234 - | LysR family transcriptional regulator TERM 1385 1925532 - 1925580 + g 74 -14.5 -2.57795 | gap 1, opp_overlap 1925546, overlap 1925558 1925559 CCTGCGGTGAGACCC GCAGCCGCGAACCACTGCGCCC AGGTCG GGGCGT-GCGGGTCGCCGCTGC TCCATTCGTAGTGGA Rmet_1775 1926291 - 1927682 + | FAD linked oxidase-like protein ampC 1928917 - 1927745 - | beta-lactamase Rmet_1777 1928942 - 1930744 + | Na/Pi cotransporter II-related Rmet_1778 1931166 - 1930801 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1386 1931222 - 1931207 - H 76 -9 -4.12532 | opp_overlap 1931207 GGCGTGACAGAGAAA GTGGCA ATCA TGCCAC TTTTCATCGCTTTTG TERM 1387 1931207 - 1931222 + H 82 -9 -4.34771 | opp_overlap 1931207 GGCGTGACAGAGAAA GTGGCA ATCA TGCCAC TTTTCATCGCTTTTG TERM 1388 1931777 - 1931736 - g 72 -8.6 -3.9693 | opp_overlap 1931744 CAGGCACTGAAAGAA GTCGTCGATCAGGCCGGC GCCGAT GTCGTGCTGATCGTCGAC GAAGTGCAGCACGCC Rmet_1779 1931328 - 1932491 + | hypothetical protein Rmet_1780 1932494 - 1933090 + | methyltransferase type 11 Rmet_1781 1934076 - 1933159 - | catechol 1,2-dioxygenase Rmet_1782 1935174 - 1934104 - | oxidoreductase FAD/NAD(P)-binding TERM 1389 1935098 - 1935055 - G 83 -15.2 -3.29144 | gap 1 GCAGGTCCCGCACAA GCCATGCCCGCAGGCATGGGG CAG CCACACGCCGGCGCGCA-GGC AGGCGTCAAGCACGG Rmet_1783 1935557 - 1935195 - | phenol hydroxylase region Rmet_1784 1937121 - 1935574 - | methane/phenol/toluene hydroxylase Rmet_1785 1937422 - 1937150 - | monooxygenase component MmoB/DmpM Rmet_1786 1938429 - 1937434 - | methane/phenol/toluene hydroxylase Rmet_1787 1938670 - 1938473 - | phenol hydroxylase subunit TERM 1390 1938689 - 1938710 + H 77 -10.9 -3.58802 | gap 1, overlap 1938678 TCGCTCCTGGTGCGC CGCACATCGC GGT GCG-TGTGCG TTGTCTCGTGATTTC TERM 1391 1938787 - 1938804 + H 76 -12.7 -3.28712 | TGTGGCGCAAGGGCT TGCGGCC AATC GGCCGCA TTCTGGCCGGCCAAC TERM 1392 1938976 - 1938960 - H 73 -4.4 -4.66609 | gap 1, overlap 1938963 TAGGCTACGCAAAAA CGAGGCT CGAA AGCC-CG CCGGAATCTGGAGTG TERM 1393 1939930 - 1939913 - g 86 -9.8 -4.56597 | TTCGGCGTGGAAAAA GGCGCC TACACG GGCGCC CAGCAGTCGCGCCCC TERM 1394 1940497 - 1940483 - g 79 -5.7 -4.65895 | overlap 1940494 GCGCTGATCGAAAAA CTGCT CAACC AGCAG GTGTCCCTGCCGCAA Rmet_1788 1938998 - 1940626 + | sigma-54 factor, interaction region Rmet_1789 1940721 - 1941419 + | GntR family transcriptional regulator Rmet_1790 1941480 - 1942892 + | FAD linked oxidase-like protein Rmet_1791 1943011 - 1944219 + | secretion protein HlyD TERM 1395 1944928 - 1944905 - g 88 -8.9 -4.59773 | gap 1, overlap 1944919 1944921 GTCCATCTGGAAAAA GGCGA-GCTG ACCAA CAGCGTCGCC ACCACGGCATCGCGC Rmet_1792 1944242 - 1944946 + | ABC transporter-related protein TERM 1396 1945539 - 1945564 + G 71 -10.3 -3.68351 | opp_overlap 1945538 1945536 1945539 CGTACGCAAGAAGAC CGCCCGCCAGG CTGA CCAGGTGGGTG TTTACGTGATCGGCG TERM 1397 1945827 - 1945845 + G 78 -10.2 -4.07124 | CGCCACACTCAAGGC GCTCGGCT TTG GGCCGGGC TTTCTGTCGATGCTG TERM 1398 1945873 - 1945889 + G 72 -6.5 -4.25283 | overlap 1945874 1945883 CTGGTATTTGGCGAG TCGCTGA TCA TCAGCGC TTTTGGTGGCGGGCT Rmet_1793 1944949 - 1946103 + | hypothetical protein Rmet_1794 1946109 - 1947275 + | hypothetical protein Rmet_1795 1948214 - 1947324 - | LysR family transcriptional regulator Rmet_1796 1948343 - 1950220 + | fusaric acid resistance protein region Rmet_1797 1950403 - 1950720 + | hypothetical protein Rmet_1798 1951987 - 1950998 - | hypothetical protein TERM 1399 1951989 - 1952001 + r 74 -3.3 -4.84363 | GTTGCCGTTGCCATC GGATG CTG CCTCC TTTTTCATGGTTTCG Rmet_1799 1952336 - 1951971 - | ArsR family transcriptional regulator TERM 1400 1952419 - 1952399 - R 100 -10.4 -5.03314 | opp_overlap 1952399 TTGAGCGGCAAAAAA GGCGGGAC GCCGT ATCCCGCC TTGATGACTGACCAA Rmet_1800 1953068 - 1952517 - | MarR family transcriptional regulator TERM 1401 1952716 - 1952701 - G 71 -10.4 -3.65199 | AATTCCCGATTGAAA TCGCGC GCCC GCGCGA AGGCCGCCGCGTACA Rmet_1801 1953174 - 1954205 + | hypothetical protein TERM 1402 1954632 - 1954618 - g 74 -11.4 -3.66178 | GCGCGGAACTGGAAA CGCTGC TGC GCAGCG GGCACTTCGTCGAAG Rmet_1802 1954251 - 1955807 + | sulfatase Rmet_1803 1955967 - 1956632 + | CDP-alcohol phosphatidyltransferase Rmet_1804 1956644 - 1957447 + | 2OG-Fe(II) oxygenase Rmet_1805 1957453 - 1958451 + | hypothetical protein Rmet_1806 1958666 - 1958448 - | hypothetical protein Rmet_1807 1958681 - 1959436 + | rfbF; ADP-glucose pyrophosphorylase Rmet_1808 1959433 - 1961127 + | 2,3-dimethylmalate lyase TERM 1403 1961152 - 1961167 + G 77 -11.8 -3.62096 | TCCAGTTCGTGGAAG CCGCGC GCGA GCGCGG TTTCGAGTGGTACGC Rmet_1809 1961124 - 1962323 + | thiamine pyrophosphate enzyme-like TPP-binding TERM 1404 1962386 - 1962399 + G 70 -2.3 -4.59773 | overlap 1962387 AAACCGACCTGTGCC ATCGC GAAA GCGAG TTTTTCGACCTGCAG TERM 1405 1962891 - 1962902 + G 79 -7.2 -4.5442 | overlap 1962888 1962880 GTGCCTGCACGGCGT GCCG GGTG CGGC TTTTGTGATTGCGCG Rmet_1810 1962310 - 1963377 + | aminotransferase, class V Rmet_1811 1965046 - 1963448 - | phospholipase D/transphosphatidylase TERM 1406 1963770 - 1963823 + g 71 -4.4 -4.56702 | CGATCCACCATGTAG GTCTTGGCGT-GCAGGCTGGCGCGGC TGCT GCCGCCCGGGCC-GCTGCGGTGGGAC TTTCTTTCCTTGGCC Rmet_1812 1966268 - 1965117 - | Rieske (2Fe-2S) region Rmet_1813 1967669 - 1966449 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_1814 1968871 - 1967696 - | acyl-CoA dehydrogenase-like protein TERM 1407 1968535 - 1968566 + g 71 -12.2 -3.27923 | GCTGCAGGTAGCGCG CCTGCTGCGCGGCG TTGC CGTGGCGCATCAGG TTGATCATGTTCGGC Rmet_1815 1969845 - 1968868 - | hypothetical protein TERM 1408 1969144 - 1969158 + g 72 -3.5 -4.68593 | gap 1, overlap 1969143 CGTCGGCAGGCCCGG CGCCGC CGTA GCG-CG TTTTTCGCTGGTCAC Rmet_1816 1971192 - 1969903 - | acyl-CoA dehydrogenase-like protein Rmet_1817 1971205 - 1971987 + | IclR family transcriptional regulator Rmet_1818 1971990 - 1972784 + | IclR family transcriptional regulator TERM 1409 1972898 - 1972840 - f 73 -10 -3.59738 | opp_overlap 1972876, overlap 1972830 1972832 GACGAGACGGCCAAA GCGGCCAAAGCGGCCAAAGCGGCCAAAG CGA CCTGGGCGGCAAATGCCGCTTTGGCAAC AAGGGCTTGCTTGAC TERM 1410 1975179 - 1975156 - g 75 -7.5 -4.25458 | gap 1 AACCTGACCAACAAA CGC-TACTGG GGCTT CCAGTACGCG GAGTACATCCAGCCG Rmet_1819 1973011 - 1975239 + | TonB-dependent siderophore receptor TERM 1411 1975263 - 1975304 + F 100 -8.8 -4.86001 | gap 3, opp_overlap 1975249 1975263 AGCGACGTCAGGGAA CCGGGA-TGT-CGCGCCGGGC ATC GCCCG-CGTATACAATCCCGG TTTTTCTGACCTGAT purT 1975331 - 1976533 + | phosphoribosylglycinamide formyltransferase 2 Rmet_1821 1977954 - 1976611 - | MscS mechanosensitive ion channel Rmet_1822 1979249 - 1978062 - | metal dependent phosphohydrolase Rmet_1823 1979559 - 1980596 + | heat shock protein DnaJ-like protein TERM 1412 1980622 - 1980603 - T 95 -16.4 -3.75153 | TTCCCGTAATGCAAA CGCCGCCC GGAT GGGCGGCG TCTGGAAACGACTGC Rmet_1824 1981334 - 1980654 - | ankyrin Rmet_1825 1982160 - 1981363 - | TatD-related deoxyribonuclease Rmet_1826 1982736 - 1982326 - | type IV pilus assembly PilZ Rmet_1827 1983855 - 1982842 - | DNA polymerase III subunit delta' tdk 1984544 - 1983942 - | thymidylate kinase Rmet_1829 1985547 - 1984549 - | aminodeoxychorismate lyase Rmet_1830 1985734 - 1986744 + | glycine cleavage T protein (aminomethyl transferase) TERM 1413 1986866 - 1986849 - g 81 -12.7 -3.64822 | opp_overlap 1986847 1986846 ATCGCTGGATGGAAA CGGTCGC CGAG GCGACCG GAGTTGGTGGTACGC Rmet_1831 1986764 - 1987054 + | hypothetical protein Rmet_1832 1987133 - 1987987 + | hypothetical protein Rmet_1833 1988454 - 1988011 - | GCN5-related N-acetyltransferase Rmet_1834 1988632 - 1989375 + | GntR family transcriptional regulator Rmet_1835 1989435 - 1990331 + | 6-phosphogluconate dehydrogenase, NAD-binding Rmet_1836 1990354 - 1991622 + | type III effector Hrp-dependent outers TERM 1414 1992207 - 1992195 - g 74 -4.7 -4.56775 | overlap 1992196 ATGCTCGGCGAAAAA CCTGC CCC GCTGG ACGAGGCCGCGCTGA Rmet_1837 1991619 - 1992257 + | putative aldolase TERM 1415 1992394 - 1992370 - f 100 -17.9 -3.53012 | CTGCCCTCTCCCAAA CCCTCTCCCGC CAT GCGAGAGAGGG AGCAAACCGGCTGCA Rmet_1838 1992435 - 1993793 + | major facilitator transporter Rmet_1839 1993824 - 1994606 + | xylose isomerase-like TIM barrel Rmet_1840 1994671 - 1995642 + | NAD-dependent epimerase/dehydratase TERM 1416 1995715 - 1995668 - T 95 -20 -2.62184 | TCGCGGTTGACAGGA TTGACAGGCTTGCCCTCTGCCG CTCG CGGGAGAGGGCAAGCACATCAA ACATCATCCCAACTC Rmet_1841 1996166 - 1995729 - | 4-hydroxybenzoyl-CoA thioesterase TERM 1417 1996190 - 1996215 + r 72 -11.1 -3.3785 | gap 1, opp_overlap 1996192, overlap 1996192 AAGCTCCAATGAAAA AACGGGCG-CCC CGT GGGACGCCCGTG TTCTACGTACCTTAC TERM 1418 1996192 - 1996213 + r 78 -13.7 -3.25668 | gap 1, opp_overlap 1996192, overlap 1996190 GCTCCAATGAAAAAA CGGGCG-CCC CGT GGGACGCCCG TGTTCTACGTACCTT TERM 1419 1996213 - 1996192 - R 100 -15.1 -5.26875 | opp_overlap 1996192 1996190 GCTCCAATGAAAAAA CGGGCGCCC CGTG GGACGCCCG TGTTCTACGTACCTT Rmet_1842 1997210 - 1996227 - | twin-arginine translocation pathway signal Rmet_1843 1998376 - 1997342 - | Alpha/beta hydrolase fold-3 Rmet_1844 1998516 - 1999037 + | Appr-1-p processing Rmet_1845 1999988 - 1999068 - | alpha/beta hydrolase fold Rmet_1846 2000972 - 2000070 - | hypothetical protein Rmet_1847 2001981 - 2001049 - | putative glutathione S-transferase-related protein Rmet_1848 2002833 - 2002000 - | hypothetical protein Rmet_1849 2003913 - 2002900 - | zinc-binding alcohol dehydrogenase TERM 1420 2003433 - 2003489 + g 70 -11.5 -3.38991 | opp_overlap 2003463 2003464, overlap 2003434 2003436 2003461 GCCCCACCACGCTAC CCACCGCGCCGGACGCC-GCGCTGACG ACAAC CGTCT-CGCCGGCCTTCGGCGCGATGA TCTTGTTCAGGCCAT TERM 1421 2003434 - 2003488 + g 74 -15 -2.63073 | opp_overlap 2003463 2003464, overlap 2003433 2003436 2003461 CCCCACCACGCTACC CACCGCGCCGGACGCC-GCGCTGACG ACAAC CGTCT-CGCCGGCCTTCGGCGCGATG ATCTTGTTCAGGCCA Rmet_1850 2004433 - 2003969 - | phenylacetic acid degradation-related protein Rmet_1851 2005275 - 2004493 - | gluconate 5-dehydrogenase Rmet_1852 2007226 - 2005367 - | acyl-CoA dehydrogenase-like protein Rmet_1853 2008619 - 2007441 - | acetyl-CoA acetyltransferase Rmet_1854 2009365 - 2008700 - | isochorismatase hydrolase TERM 1422 2009269 - 2009318 + g 93 -17.2 -3.31461 | gap 1 GGTTGATGATCGGCA CGACTTCATCGCCGCGCGGCACG GCCAG CGCGCCCCCCGGC-ATGAAGTCG TTCTGCACATCGATC Rmet_1855 2011483 - 2009402 - | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase TERM 1423 2010473 - 2010505 + g 70 -11.1 -3.31625 | overlap 2010467 GCTGTTCTCGTAGTT GCGGCGGATCGTGGC CAC GCCGCGCTCCAGCGC TTCCTGCTTCATTTC TERM 1424 2011669 - 2011633 - H 73 -4.3 -4.64591 | opp_overlap 2011660 2011663, overlap 2011635 CAAGCATACACAAAA TAGCACGGTCGTTCAAT TTC ATTTTTCGACCGCGCAA ACCGCGTTATGCGCG Rmet_1856 2011950 - 2013431 + | amino acid permease-associated region TERM 1425 2013495 - 2013465 - T 95 -12.4 -4.26903 | opp_overlap 2013471 GTCACGGCACCAAAA GCGCTAGCGCCCGC ATT GCGGGCGCTTTTGC CTGGGGAACGAGATC TERM 1426 2013471 - 2013489 + T 100 -17.4 -4.18018 | opp_overlap 2013465 GCACCAAAAGCGCTA GCGCCCGC ATT GCGGGCGC TTTTGCCTGGGGAAC Rmet_1857 2014134 - 2013700 - | hypothetical protein TERM 1427 2014049 - 2014037 - G 70 -4.8 -4.41348 | TGCGCGCGAAAGAAA CTCG GGACG CGAG CCAAAGGCAGCAGTG TERM 1428 2014353 - 2014382 + r 76 -10.7 -3.70902 | opp_overlap 2014353 GACGCGCATGGCAAA GCGCCTTGCTCAC CTGC GTGAGAAAGACGC TTTGAATCTACAGCA TERM 1429 2014382 - 2014353 - R 82 -12.9 -3.60296 | opp_overlap 2014353 GACGCGCATGGCAAA GCGCCTTGCTCAC CTGC GTGAGAAAGACGC TTTGAATCTACAGCA Rmet_1858 2015194 - 2014481 - | ABC transporter-related protein TERM 1430 2014874 - 2014839 - G 100 -20.6 -3.00766 | gap 1, opp_overlap 2014833 2014832 AACATCTGATACATA TCCGCGACAGACC-AGC GTG GCTTGGCCTGTCGCGGA TTGCGCTTCTCGCCG Rmet_1859 2015970 - 2015191 - | ABC transporter-related protein Rmet_1860 2017280 - 2015967 - | inner-membrane translocator Rmet_1861 2018255 - 2017284 - | inner-membrane translocator TERM 1431 2017575 - 2017557 - G 72 -8.8 -3.96624 | CACGGCCACGACAAA CACGATCG ACC CGACCGCG GCCGCCATCGACGGC TERM 1432 2018281 - 2018304 + r 72 -13.9 -2.64973 | opp_overlap 2018270, overlap 2018270 2018271 AATCCGCATTGTCCA GGGTTCCCG CGCGAA CGGGAACCC TGATCTGCCCTTCCT Rmet_1862 2019588 - 2018338 - | extracellular ligand-binding receptor Rmet_1863 2021352 - 2019748 - | acyl-CoA synthetase TERM 1433 2020808 - 2020837 + g 70 -6.3 -4.26076 | GGGTTGCCCGTGGTA CCGGACGTGTAGC AAAG GCTGGACGCCTGG TTTTCGTCGAACTGC TERM 1434 2021444 - 2021411 - H 70 -3.9 -4.60487 | gap 1, opp_overlap 2021418, overlap 2021412 2021415 GATCAGTCTGAAAAA CGAACAATCGTGCTAA TTT TTGGC-CGATTGCTCC CATACTCCGCGAAAA TERM 1435 2021850 - 2021864 + G 74 -11.4 -3.61715 | CGCCCCGGCATTGCC GCGCTC GGC GAGCGC TTCTTCACGCGACTC Rmet_1864 2021691 - 2023325 + | hypothetical protein Rmet_1865 2023374 - 2023781 + | methionine sulfoxide reductase B Rmet_1866 2023877 - 2024416 + | intracellular septation protein A Rmet_1867 2024468 - 2024782 + | transcriptional regulator BolA Rmet_1868 2024787 - 2025581 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1436 2025604 - 2025623 + F 100 -16.4 -4.98531 | opp_overlap 2025604 CCAATCCGATAAAAA GCCGGCGC TAAT GCGCCGGC TTTTTCATTTAGAGC TERM 1437 2025623 - 2025604 - f 100 -16.4 -4.87786 | opp_overlap 2025604 CCAATCCGATAAAAA GCCGGCGC TAAT GCGCCGGC TTTTTCATTTAGAGC Rmet_1869 2025771 - 2026118 + | hypothetical protein TERM 1438 2026203 - 2026223 + T 100 -18.3 -3.60627 | opp_overlap 2026203 GCTCCAAAAGAAAAA GGCGCCCGA TAA TCGGGCGCC TTTGGCATGGGCTGG TERM 1439 2026223 - 2026203 - T 100 -18.3 -5.45802 | opp_overlap 2026203 GCTCCAAAAGAAAAA GGCGCCCGA TAA TCGGGCGCC TTTGGCATGGGCTGG Rmet_1870 2030293 - 2026247 - | phosphoribosylformylglycinamidine synthase TERM 1440 2027242 - 2027252 + g 72 -6.8 -4.21439 | CATCGCGATAGATCT CGAC CTG GTCG TTTGTGTTCGGCTTG TERM 1441 2027688 - 2027699 + g 79 -7.2 -4.56597 | TGGGCCAGAATGCTG CCGC CCAT GCGG TTTTTGGCACGCCCG TERM 1442 2030391 - 2030401 + r 72 -2.4 -4.74103 | CGCTATTGTACCTTG TCGG CGA CCGC TTTTTGCATTGCGCA Rmet_1871 2031108 - 2030521 - | putative transcriptional regulator TERM 1443 2031748 - 2031778 + G 70 -11.1 -3.38046 | overlap 2031745 2031749 CGCAATGACGATGTC TGGGCGCTGCG GACACGTGA CGCGGCGCCCG TCTTTGGCGTCAGCG Rmet_1872 2031388 - 2033148 + | diguanylate cyclase Rmet_1873 2033361 - 2034713 + | amidase Rmet_1874 2034857 - 2035840 + | TRAP dicarboxylate transporter- DctP subunit Rmet_1875 2035985 - 2036536 + | TRAP-type C4-dicarboxylate transport system, small permease component Rmet_1876 2036536 - 2037846 + | TRAP dicarboxylate transporter- DctM subunit Rmet_1877 2037881 - 2039170 + | FAD dependent oxidoreductase TERM 1444 2039454 - 2039429 - g 77 -11.8 -3.61398 | overlap 2039430 TGGCCCTGGCAACAA CGGCGGCGAC GCGCTG GTCGCCGCCC TGCGCCTGCATCAGC TERM 1445 2039453 - 2039430 - g 75 -15.3 -2.76696 | overlap 2039429 GGCCCTGGCAACAAC GGCGGCGAC GCGCTG GTCGCCGCC CTGCGCCTGCATCAG TERM 1446 2039912 - 2039938 + G 72 -3.5 -4.67234 | overlap 2039917 GCCAGCCGAACATCC CGTGGCGGTGG TCAAT CAGCCGCCGGG TTTTTCCCATTCGCT TERM 1447 2039997 - 2039982 - g 70 -6 -4.31433 | overlap 2039978 CACGCGGATAACAAA GGCAGC TTCG GCAGCC TGGCAGTGATCGGTG Rmet_1878 2039178 - 2040785 + | hypothetical protein TERM 1448 2040864 - 2040809 - f 71 -8.9 -3.73534 | gap 1, overlap 2040810 CAACGCCACCAACAA TGCCGCGCGAATCACGCCAGA-CGCC GTCCA GGTGATCTCAGGTGATGCGCGCGGCG CGGCACGCGTCGGAC TERM 1449 2040863 - 2040810 - f 70 -12.4 -2.83639 | gap 1, overlap 2040809 AACGCCACCAACAAT GCCGCGCGAATCACGCCAGA-CGCC GTCCA GGTGATCTCAGGTGATGCGCGCGGC GCGGCACGCGTCGGA TERM 1450 2041792 - 2041817 + G 71 -10.5 -3.57144 | gap 1, opp_overlap 2041767 2041800, overlap 2041784 CACTTCGTCGCCGTG TCGACCAATCGC GAC GCGGT-GGTCGA TTTCGGCATCGACCC Rmet_1879 2041066 - 2042691 + | glucose-6-phosphate isomerase Rmet_1880 2043294 - 2042707 - | ABC transporter-related protein Rmet_1881 2043392 - 2044072 + | lipolytic enzyme, G-D-S-L TERM 1451 2044196 - 2044140 - T 83 -16.2 -3.04263 | opp_overlap 2044154, overlap 2044145 2044154 AGCTGATCGGCAAGA CCAC-ATGCAAAAAAGCCCCTGCAGGCT CGC AACC-GCAGGGGCTTCTTTACATCGCAG GTGACGTCGCGTCAG TERM 1452 2044190 - 2044145 - T 88 -19.3 -2.91728 | gap 1, opp_overlap 2044154, overlap 2044140 2044154 ATCGGCAAGACCACA TGCAAAAAAGCCCCTGCAGGCT CGC AACC-GCAGGGGCTTCTTTACA TCGCAGGTGACGTCG TERM 1453 2044181 - 2044154 - T 100 -14.2 -5.13473 | gap 1, opp_overlap 2044154, overlap 2044145 2044140 ACCACATGCAAAAAA GCCCCTGCAGGCT CGC AACC-GCAGGGGC TTCTTTACATCGCAG TERM 1454 2044154 - 2044181 + T 82 -12 -3.96216 | gap 1, opp_overlap 2044145 2044140 2044154 ACCACATGCAAAAAA GCCCCTGCAGGCT CGC AACC-GCAGGGGC TTCTTTACATCGCAG Rmet_1882 2046151 - 2044208 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1455 2046367 - 2046388 + r 76 -5.7 -4.63486 | opp_overlap 2046370, overlap 2046368 2046370 AATTGCGGACACAAA AAAGCCCGC TGAC GCGGGCTAA TTTTGTTGGCGGAGT TERM 1456 2046385 - 2046370 - R 100 -11.8 -5.36441 | opp_overlap 2046370 2046368 2046367 TGCGGACACAAAAAA GCCCGC TGAC GCGGGC TAATTTTGTTGGCGG TERM 1457 2046808 - 2046785 - R 100 -15.3 -5.27335 | opp_overlap 2046785 TTGCGCAAACAAAAA CGCCGCAGG TTTGAC CCTGCGGCG TTCCTAACTACATCT TERM 1458 2046785 - 2046808 + r 82 -15.3 -3.19091 | opp_overlap 2046785 TTGCGCAAACAAAAA CGCCGCAGG TTTGAC CCTGCGGCG TTCCTAACTACATCT Rmet_1883 2049255 - 2046844 - | Lon-A peptidase TERM 1459 2049451 - 2049428 - R 100 -13.9 -5.83226 | AATTGAAGAAAAAAA GCCGTTCGC TTTGCT GCGAACGGC CGCTTGAAATTTGCC clpX 2050779 - 2049502 - | ATP-dependent protease ATP-binding subunit TERM 1460 2050927 - 2050911 - R 100 -9.4 -4.87318 | GGCAAAACGCAAAAA CGAGGC ATACA GCCTCG TTCCGGTGTAGCCTT clpP 2051710 - 2051060 - | ATP-dependent Clp protease proteolytic subunit TERM 1461 2051773 - 2051735 - R 82 -14.7 -3.21354 | CCAGATATTCAGGAA TGGCGTCAATCGGCC AGCGCGCGA GGCCGATTGACGCAA GCCAGCGCCGCGCCA tig 2053169 - 2051820 - | trigger factor TERM 1462 2052760 - 2052772 + g 71 -9.1 -3.77831 | ACGGTCTTGTCAATC TCGGC GTC GCCGA TTTCGGTCTTGGTGC mnmC 2055337 - 2053319 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 1463 2054646 - 2054630 - G 71 -13.7 -2.71712 | opp_overlap 2054628, overlap 2054629 GCGGTTCTTCCAAAC TGGCGCG AAA CGCGCCA CGGTCATGTCTCGCT Rmet_1888 2055461 - 2056318 + | hypothetical protein TERM 1464 2056402 - 2056385 - T 74 -7.1 -4.4017 | GTAAGTTGGATAAAA TTAACTC ATTC GAGTTAA TCCCCTCGTACGTAG TERM 1465 2056487 - 2056510 + T 100 -10.3 -5.82388 | gap 1 CGATAATTCATCCCG GCCCGCCTGC TTCGC GCAG-CGGGC TTTTTTTTCGACTTT TERM 1466 2056973 - 2056950 - T 82 -9.4 -4.29738 | opp_overlap 2056949 CGAGACTGAGCAAAA CCCGCCAGGC TTGC GCAAGGCGGG CTGATCTCGACAAAT Rmet_1889 2057329 - 2057087 - | hypothetical protein Rmet_1890 2057814 - 2058395 + | endonuclease Rmet_1891 2058654 - 2059556 + | hypothetical protein Rmet_1892 2060691 - 2059891 - | LuxR family transcriptional regulator TERM 1467 2060978 - 2061014 + r 79 -15.2 -2.97109 | gap 2, overlap 2060978 CGACTTTCGGAGGTG CCGGTAACGCGCATGCCC ATC GGGCA-GCGCGTC-CCGG GTTTCATTGCGTTCG TERM 1468 2060978 - 2061015 + r 82 -11.9 -3.96387 | gap 1, overlap 2060978 CGACTTTCGGAGGTG CCGGTAACGCGCATGCCC ATC GGGCA-GCGCGTCCCGGG TTTCATTGCGTTCGT Rmet_1893 2061537 - 2061037 - | hypothetical protein TERM 1469 2061396 - 2061382 - G 86 -7 -4.91852 | opp_overlap 2061382 CTGAGGAAAAATAAA GGCGCC AGA GCCGCC TTTGATAGTTTGCCG Rmet_1894 2062536 - 2061562 - | LysR family transcriptional regulator Rmet_1895 2062686 - 2064230 + | hypothetical protein Rmet_1896 2064371 - 2064781 + | 4-oxalocrotonate tautomerase Rmet_1897 2065646 - 2064741 - | LysR family transcriptional regulator Rmet_1898 2065750 - 2067165 + | aldehyde dehydrogenase Rmet_1899 2068907 - 2067195 - | pyruvate dehydrogenase (cytochrome) Rmet_1900 2069485 - 2070387 + | LysR family transcriptional regulator Rmet_1901 2071351 - 2070611 - | XRE family transcriptional regulator Rmet_1902 2071506 - 2072135 + | hypothetical protein Rmet_1903 2072132 - 2072869 + | hypothetical protein TERM 1470 2073723 - 2073693 - g 72 -6.6 -4.258 | TCAGCCACCAACAAA CCACCCTCAATGCC GTC GGCGCAGGGGGCGG TGGCGCGGTTGCCAT Rmet_1904 2073323 - 2074219 + | hypothetical protein Rmet_1905 2075684 - 2074617 - | LacI family transcription regulator Rmet_1906 2076718 - 2075741 - | hypothetical protein TERM 1471 2076021 - 2076070 + g 70 -11.4 -3.33696 | overlap 2076022 2076026 GTCGGGATATCGGGC AGCACGCTCGTGCGCGCGGGC-GT GGTC ACTGCCAGCGCGCGC-AGCTTGCC TTGCTTGACAAACGG TERM 1472 2076022 - 2076069 + g 74 -14.9 -2.60075 | overlap 2076021 2076026 TCGGGATATCGGGCA GCACGCTCGTGCGCGCGGGC-GT GGTC ACTGCCAGCGCGCGC-AGCTTGC CTTGCTTGACAAACG TERM 1473 2076026 - 2076065 + g 74 -12.9 -3.23899 | overlap 2076022 2076021 GATATCGGGCAGCAC GCTCGTGCGCGCGGGC-GT GGTC ACTGCCAGCGCGCGC-AGC TTGCCTTGCTTGACA Rmet_1907 2077879 - 2076764 - | porin TERM 1474 2077552 - 2077535 - G 75 -3.3 -4.7254 | ATGCCCCATGAAAAA CAGGCCA TAGT CGCCCTG CAGACCGATGCGCGA Rmet_1908 2078342 - 2077992 - | cupin 2, barrel Rmet_1909 2079328 - 2078339 - | zinc-binding alcohol dehydrogenase Rmet_1910 2080279 - 2079344 - | hypothetical protein TERM 1475 2079443 - 2079466 + g 85 -7.4 -4.60041 | gap 1, opp_overlap 2079440, overlap 2079421 CTTGGCGACCAACGC GGCGTTGCTCG GCG CCAGC-ACGCC TTTTTCGAGATAGAT TERM 1476 2080273 - 2080253 - G 75 -3.1 -4.80959 | overlap 2080257 2080258 2080260 GAACTGAGAAGAAAA GGAATCAGC CGA GCTGGCGCC CGCCATCGACGACGA Rmet_1911 2081006 - 2080257 - | short-chain dehydrogenase/reductase SDR Rmet_1912 2082012 - 2081074 - | intradiol ring-cleavage dioxygenase Rmet_1913 2082777 - 2082211 - | antibiotic biosynthesis monooxygenase Rmet_1914 2083058 - 2083756 + | isochorismatase hydrolase Rmet_1915 2084368 - 2083961 - | two component LuxR family transcriptional regulator Rmet_1916 2084420 - 2085034 + | isochorismatase hydrolase TERM 1477 2085070 - 2085050 - f 75 -14 -2.91383 | opp_overlap 2085046 2085050 AGGTGGACTGACACA CGGCTGCC TTGTC GGCAGCCG TGCCTTGCATCGAGC TERM 1478 2085050 - 2085070 + F 72 -14 -2.54896 | opp_overlap 2085050, overlap 2085046 AGGTGGACTGACACA CGGCTGCC TTGTC GGCAGCCG TGCCTTGCATCGAGC Rmet_1917 2085180 - 2085833 + | DSBA oxidoreductase Rmet_1918 2086488 - 2085889 - | hypothetical protein Rmet_1919 2087210 - 2086497 - | hypothetical protein Rmet_1920 2087884 - 2087258 - | isochorismatase hydrolase Rmet_1921 2088458 - 2088156 - | hypothetical protein Rmet_1922 2090107 - 2088455 - | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rmet_1923 2090584 - 2090201 - | OsmC-like protein TERM 1479 2091217 - 2091206 - H 71 -5.8 -4.37092 | overlap 2091208 AGCCCGGCCACAAAA GTGG CGCT CCAC GTAGCGCTGGCATCA Rmet_1924 2091301 - 2092017 + | short chain dehydrogenase TERM 1480 2092090 - 2092140 + T 100 -17.7 -3.43071 | gap 1, opp_overlap 2092084 CAGAGAAATTGCGAC TTGTCGCGGCACAT-ACGTTCGCC ACTC GGCGGTCTTCATGTGCCGCGGCAA TTGGTTAATATCGAC Rmet_1925 2093029 - 2092439 - | hypothetical protein TERM 1481 2093350 - 2093365 + r 76 -6.2 -4.67353 | opp_overlap 2093350 CGGGGGAGTGTAAAA GTTACT GATG AGTAAC TTTTTAGATAAGTGG TERM 1482 2093525 - 2093489 - R 73 -9.6 -3.85817 | gap 2, opp_overlap 2093492 2093497, overlap 2093497 ACGGTGGTCGACAAA GCAA-AAAAGGC-GGCTG GAA CTGCCCGCCTTTTCTTGC TTGCGGCGACTAGGC TERM 1483 2093516 - 2093497 - R 91 -5.6 -5.42514 | gap 1, opp_overlap 2093497 2093492, overlap 2093489 CGACAAAGCAAAAAA GGC-GGCTG GAA CTGCCCGCC TTTTCTTGCTTGCGG TERM 1484 2093497 - 2093516 + r 81 -5.6 -4.78572 | gap 1, opp_overlap 2093489 2093497, overlap 2093492 CGACAAAGCAAAAAA GGC-GGCTG GAA CTGCCCGCC TTTTCTTGCTTGCGG TERM 1485 2093642 - 2093612 - R 82 -14.8 -3.18274 | gap 1 CGGATTGTAACGCAA GGC-GGCAGGGGA ATCCAG TCCCCTGCCCGCC CTGCGGGCATCCTGC Rmet_1926 2094990 - 2093665 - | major facilitator transporter TERM 1486 2094483 - 2094454 - G 71 -12.1 -3.21099 | gap 1 CGCGCTCATGATGAA GCCGGC-CAGCGGG CCG CCCACCACGCCGGC AATTGCGAACGAGGT Rmet_1927 2096422 - 2095100 - | amidase Rmet_1928 2097096 - 2096419 - | hypothetical protein Rmet_1929 2097881 - 2097132 - | GntR family transcriptional regulator TERM 1487 2097359 - 2097328 - G 73 -13.6 -2.80935 | AGGCCACGCAGCAGA TCGGCCAGCACGCG GTTG CGCGAGGCGGCCGA CATCGCCGTGTGGAA Rmet_1930 2098060 - 2098845 + | IclR family transcriptional regulator Rmet_1931 2100105 - 2098858 - | amidase, hydantoinase/carbamoylase TERM 1488 2101043 - 2101017 - g 71 -10.8 -3.62046 | overlap 2101018 GGAGCTTGCCAAGAA CCCCGCCTACTG GGA CAGCAAGCGGGT GCCAAAGATCGACAA TERM 1489 2101042 - 2101018 - g 71 -14.3 -2.77013 | overlap 2101017 GAGCTTGCCAAGAAC CCCGCCTACTG GGA CAGCAAGCGGG TGCCAAAGATCGACA Rmet_1932 2100202 - 2101962 + | extracellular solute-binding protein TERM 1490 2101976 - 2102001 + F 74 -11.1 -3.53012 | GACGGACTCGCCGCA GTGCCCTCCTC CGCG GAAGGGGGCAC TTTCCCGCGCCAACG Rmet_1933 2102049 - 2102999 + | binding-protein-dependent transport systems inner membrane component Rmet_1934 2103010 - 2103897 + | binding-protein-dependent transport systems inner membrane component TERM 1491 2104437 - 2104389 - g 70 -13.8 -2.53876 | gap 1, opp_overlap 2104415 2104415, overlap 2104413 CTGGAGCCGAAGCGA TTCGCCGGCCGCTATCCGCACGA ACTG TCGGGCGGACAGC-GCCAGCGCG TGAACATTGCGCGCG Rmet_1935 2103900 - 2104979 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_1936 2104996 - 2106009 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_1937 2106043 - 2107233 + | amidase TERM 1492 2107681 - 2107659 - g 70 -5.4 -4.42238 | opp_overlap 2107665 2107667 CGAGGGCAAGGAAAA CCTGCGCGCC CTG GGCACCAAGG TGCTGTGGGAAGGCG Rmet_1938 2107315 - 2107725 + | hypothetical protein Rmet_1939 2108669 - 2107731 - | LysR family transcriptional regulator Rmet_1940 2108668 - 2109522 + | hypothetical protein Rmet_1941 2109629 - 2109865 + | hypothetical protein TERM 1493 2109876 - 2109853 - T 93 -14.6 -3.74526 | gap 1 CTACGAATGGAAGAA GC-GCAGGCCG TAG CGGCCTGCTGC CAGCCCCCCAAACCC Rmet_1942 2113002 - 2109892 - | acriflavin resistance protein Rmet_1943 2114583 - 2113012 - | secretion protein HlyD Rmet_1944 2114598 - 2115428 + | squalene/phytoene synthase Rmet_1945 2115488 - 2116750 + | allantoate amidohydrolase TERM 1494 2116848 - 2116806 - T 73 -9.8 -3.59979 | opp_overlap 2116836 2116838 GGGCGGTACGGCAAA GCCGCGCAACCACGCCAG GATCACT CTGAAGCGGTTGCTCAGC CGCCTTGGTACATCT Rmet_1946 2117269 - 2116844 - | putative transmembrane protein TERM 1495 2117901 - 2117913 + G 71 -9.1 -3.78953 | opp_overlap 2117899 AAACCCCGGAAACGT TCGCC TTC GGCGA TTTCGTACTCAACCT ompR 2117483 - 2118205 + | osmolarity response regulator TERM 1496 2118254 - 2118264 + G 72 -8.2 -4.09321 | overlap 2118261 CCGCTCTCGGCCGTA CCGC AAC GCGG TTCTTTGGTTCGCTC Rmet_1948 2118232 - 2119581 + | periplasmic sensor signal transduction histidine kinase TERM 1497 2119824 - 2119798 - f 71 -7.3 -4.2349 | gap 1, overlap 2119800 2119802 TGCCCACACCGAAAA CAT-ACCGCCGG TCAA CCGGCGGTGATC GAGAGACAGCCATGT TERM 1498 2119821 - 2119800 - f 80 -11.5 -3.71913 | overlap 2119798 2119802 CCCACACCGAAAACA TACCGCCGG TCAA CCGGCGGTG ATCGAGAGACAGCCA TERM 1499 2119819 - 2119802 - f 86 -14.1 -3.43676 | overlap 2119800 2119798 CACACCGAAAACATA CCGCCGG TCAA CCGGCGG TGATCGAGAGACAGC Rmet_1949 2119836 - 2121125 + | general substrate transporter Rmet_1950 2121472 - 2122020 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1500 2122099 - 2122051 - f 71 -9.1 -3.72576 | gap 3, opp_overlap 2122071 2122096, overlap 2122063 2122096 GTCGCCTCGAGCAAA CTGGCGTATCAAGCGTGAAAGGGC CAGC GCCCTTTCACG-TCGAAAC-CC-G CTCCGTGCGGGTTTT TERM 1501 2122090 - 2122063 - f 78 -14.2 -3.1506 | opp_overlap 2122071, overlap 2122051 AAACTGGCGTATCAA GCGTGAAAGGGC CAGC GCCCTTTCACGT CGAAACCCGCTCCGT TERM 1502 2122096 - 2122110 + F 93 -8.5 -5.02074 | opp_overlap 2122051 2122096 CCTTTCACGTCGAAA CCCGC TCCGT GCGGG TTTTTTGAGCCCTCG Rmet_1951 2122142 - 2122663 + | alkylhydroperoxidase AhpD core TERM 1503 2122706 - 2122736 + F 100 -18.3 -4.58773 | gap 1, opp_overlap 2122706 GCGTGACGGATGCAA GCCGGCGCGCGCCC TCAC GGGTGC-CGCCGGC TTTTCCTTTGCTGCG TERM 1504 2122736 - 2122706 - f 83 -16.1 -3.07816 | gap 1, opp_overlap 2122706 GCGTGACGGATGCAA GCCGGCGCGCGCCC TCAC GGGTGC-CGCCGGC TTTTCCTTTGCTGCG Rmet_1952 2122869 - 2123447 + | GCN5-related N-acetyltransferase Rmet_1953 2123991 - 2123485 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2124848 - 2124024 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1505 2124812 - 2124793 - G 91 -16.4 -3.6707 | opp_overlap 2124791 2124788 2124787 ATGGAATATCGGAAA CCGGCCGG CAAA CCGGCCGG GGTGCATTCTATAAT Rmet_1955 2124983 - 2128435 + | transcription-repair coupling factor Rmet_1956 2128466 - 2129701 + | acetylornithine deacetylase TERM 1506 2129771 - 2129755 - T 89 -4.3 -5.28683 | overlap 2129757 ACCAAGACCAAAAAA CGGGGTC ACC AACGCCG GCCCGCAAAAAGAAA TERM 1507 2129790 - 2129815 + T 89 -16.1 -3.30781 | opp_overlap 2129790, overlap 2129785 CGCAAAAAGAAAAAA CCCGCGGCACC GGGA GGTGCAGCGGG TTAAGTTTCCATTCC TERM 1508 2129815 - 2129790 - T 100 -16.1 -5.93252 | opp_overlap 2129785 2129790 CGCAAAAAGAAAAAA CCCGCGGCACC GGGA GGTGCAGCGGG TTAAGTTTCCATTCC TERM 1509 2129877 - 2129847 - T 74 -11.3 -3.51161 | gap 1, opp_overlap 2129846 2129863 GAAACGGGTAGACAA GTCATGAAGA-GCG CCCC CGCATCTCCATGAC GGTTTGAATAGTAGC Rmet_1957 2131839 - 2129989 - | gamma-glutamyltranspeptidase Rmet_1958 2132411 - 2131941 - | OsmC-like protein TERM 1510 2132470 - 2132489 + r 78 -13.6 -3.14132 | opp_overlap 2132470 TTGTGGCGAAAAAAA GGGACCTC CGCA GAGGTCCC TTGCTCAACCCGGCC TERM 1511 2132489 - 2132470 - R 100 -13.6 -5.40072 | opp_overlap 2132470 TTGTGGCGAAAAAAA GGGACCTC CGCA GAGGTCCC TTGCTCAACCCGGCC Rmet_1959 2135135 - 2132547 - | ATPase AAA-2 TERM 1512 2133118 - 2133071 - G 72 -13.4 -3.04792 | gap 1 GCAGCACGTTGAACA CGTCCG-GGTGCGCCTTCTCGAC TTC GTCGAGCAGGATCACCGCGTACG GCTTGCGACGCACCG TERM 1513 2134418 - 2134437 + g 79 -5.6 -4.61231 | GCAGCCCGGCCATGT CGAGCACG AGCA CGCGCTTG TTTTTGAGCGTCTCC TERM 1514 2134459 - 2134501 + g 79 -14.8 -3.01712 | AGCGTCTCCGGCACT TCGCCGTTGACGATGCGCTG TGC CAGCCCTTCGACAATGGCGG TCTTGCCCACGCCGG TERM 1515 2135319 - 2135278 - R 81 -16.1 -2.88249 | gap 1 GACATCGGCGATACA CCCGTCATACA-TTGACCAA GTA TCGGCCAAGTGCATGACGGG TAACCCGCATCGCCG Rmet_1960 2137520 - 2135352 - | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane TERM 1516 2136019 - 2135991 - G 88 -15.9 -3.32963 | ATTGCCAGTCGAGAA CAGCCCCGCCAGC GCG GCCGCCGGGGCCG TGACGGGATTGGCCT TERM 1517 2136215 - 2136250 + g 75 -3.9 -4.63218 | gap 1, overlap 2136216 ACGCATCCAGCGCGG AGGTTGCCTG-GGCGG ATGTG CTGCCTCCGGCAATCA TTTTCTTGGCGGCCA TERM 1518 2136287 - 2136301 + g 72 -8.5 -4.09685 | overlap 2136258 CGCATCGGTTGAGCG CGGCC TGCCC GGCCG TTTTGGCAAATGGCG TERM 1519 2136635 - 2136690 + g 88 -15.4 -3.41051 | gap 1 ACTTGTCGTTGACCG CCCAGAGCGTGAACTGGATCGCCTGCA ACG TGTTGGCGCCCCAGTTCGC-CTCCGGG TTCTGCTGCGAGTGC TERM 1520 2137364 - 2137389 + g 79 -11.1 -3.85698 | ACGCCGGCTTGACGT TGGGACCGGTG TTCC CGCCGCTCCCA TTTGTGCCAAACCCG Rmet_1961 2138178 - 2137798 - | camphor resistance protein CrcB TERM 1521 2137971 - 2137961 - G 70 -2.4 -4.63486 | AGGCCGCCAAGAAAA CCCG TGA CGGC CAGCAGGCGCCACTC TERM 1522 2138135 - 2138116 - G 81 -4.9 -4.87665 | overlap 2138117 2138119 2138120 CGTGACCGAGAAAAA CCAGCGC AGCCAG GCGCCGA CGGCGGCACCGACGC Rmet_1962 2138669 - 2138178 - | molybdopterin synthase subunit MoaE Rmet_1963 2138928 - 2138671 - | molybdopterin synthase subunit MoaD TERM 1523 2138712 - 2138698 - G 79 -5.6 -4.66609 | overlap 2138699 CACGGGAGGGAAAAA GGCCAC CTC GCAGCC GTCGGCCAGCGGGGT Rmet_1964 2140166 - 2138931 - | MoeA-likedomain-containing protein TERM 1524 2140233 - 2140204 - R 95 -14.9 -4.05788 | TGGCTCCAAATGAAA CAGCCCCCGGGCC GGGA AGCCTGGGGGCCG TGGCAGCGGAGCCCG Rmet_1965 2141765 - 2140320 - | threonine synthase TERM 1525 2140651 - 2140641 - G 75 -6.8 -4.41348 | overlap 2140647 GCGGCCGGAAACAAA GCCA AAC TGGC CGATGCGCGCGAATT Rmet_1966 2143104 - 2141794 - | homoserine dehydrogenase TERM 1526 2141847 - 2141881 + g 84 -15 -3.30124 | ACAGCACGGTCTGGA GCGCTTCGATGCTGCG AAT CGCGGCATTGACGTGC TTCTCGCGCGTCAGG Rmet_1967 2144384 - 2143155 - | aminotransferase AlaT Rmet_1968 2144692 - 2145072 + | hypothetical protein Rmet_1969 2145273 - 2145734 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1527 2145925 - 2145969 + F 91 -13.6 -3.86015 | opp_overlap 2145932, overlap 2145932 CGCGTCGCGGGTCCG CAAGCAAGCCGCCATCCCTG TCCAC CAGGTCTGGCGGCTTTTTTG TTTGTCCACACCCTC TERM 1528 2145962 - 2145932 - f 76 -12.5 -3.33696 | opp_overlap 2145932 2145925 CGGGTCCGCAAGCAA GCCGCCATCCCTG TCCAC CAGGTCTGGCGGC TTTTTTGTTTGTCCA TERM 1529 2145932 - 2145962 + F 100 -12.5 -5.72622 | opp_overlap 2145932, overlap 2145925 CGGGTCCGCAAGCAA GCCGCCATCCCTG TCCAC CAGGTCTGGCGGC TTTTTTGTTTGTCCA TERM 1530 2146546 - 2146507 - g 73 -5.7 -4.41137 | gap 3, overlap 2146519 GACAACCACAAGAAA GGCATGAGCGAAGTCGCGCG TAA CGCGCG-CA-CGGTCA-GCC GGACGTTGGACCAGC Rmet_1970 2146081 - 2147775 + | PhoH-like protein TERM 1531 2147992 - 2148024 + G 73 -12 -3.35679 | opp_overlap 2147977 2147984 GCAGAACGCTGTTCT CGCGAACTGC-CCGCG TAA CGCGGCGCAGG-CGCG TTATCGCTGCAACGC Rmet_1971 2147937 - 2148413 + | putative signal peptide protein TERM 1532 2148801 - 2148828 + G 76 -9.2 -4.07746 | gap 1 CGTGGCACGGCACTC GATCGGCGCGATG TCG CATCGGG-CGATC TTGTCTTTTTCAACA Rmet_1972 2148462 - 2149100 + | NLP/P60 TERM 1533 2149133 - 2149102 - T 77 -11.7 -3.60792 | gap 1, opp_overlap 2149106 2149109, overlap 2149106 2149109 TCGCGAACCGGTAAA CGAACAAGCCAGGC ACGAA GCCTGGCTTGT-CA TTGGGATTCCGCTCG TERM 1534 2149106 - 2149130 + T 79 -15.8 -2.75481 | opp_overlap 2149106 2149102 2149109, overlap 2149109 GAACCGGTAAACGAA CAAGCCAGGC ACGAA GCCTGGCTTG TCATTGGGATTCCGC TERM 1535 2149130 - 2149106 - T 93 -15.8 -3.52918 | opp_overlap 2149106 2149109, overlap 2149102 2149109 GAACCGGTAAACGAA CAAGCCAGGC ACGAA GCCTGGCTTG TCATTGGGATTCCGC TERM 1536 2149109 - 2149127 + T 74 -11.7 -3.52539 | opp_overlap 2149109 2149106 2149102, overlap 2149106 CCGGTAAACGAACAA GCCAGGC ACGAA GCCTGGC TTGTCATTGGGATTC TERM 1537 2149127 - 2149109 - T 82 -11.7 -3.89354 | opp_overlap 2149106 2149109, overlap 2149106 2149102 CCGGTAAACGAACAA GCCAGGC ACGAA GCCTGGC TTGTCATTGGGATTC Rmet_1973 2150171 - 2149161 - | phosphate transporter TERM 1538 2150022 - 2149992 - G 82 -6.8 -4.65933 | overlap 2149994 GAGGTGGAAAATAAA GATGGCGATCACGT TGC ACATGGCCGCCATG GCCACGGCATGGTGC TERM 1539 2150020 - 2149994 - G 73 -9.4 -3.93868 | overlap 2149992 GGTGGAAAATAAAGA TGGCGATCACGT TGC ACATGGCCGCCA TGGCCACGGCATGGT TERM 1540 2150181 - 2150191 + r 71 -8.2 -4.07885 | overlap 2150188 ATGCATGCGAGTACG CGCC TCA GGCG TTTTCCAGGACGATG Rmet_1974 2150811 - 2150185 - | hypothetical protein TERM 1541 2150622 - 2150653 + g 81 -9.4 -4.21812 | ACGTCTTGTGCAGCA GGTCGATCGTGTCA TGCG TGACGCGGTCCGCC TTCTTTTCGGTGGCC TERM 1542 2150911 - 2150877 - R 88 -13.8 -3.61178 | gap 1, opp_overlap 2150871 2150887 GGGATGCAGGGCAAA TTGCATGACAGCCGC GCGAGG GCGGCTGTCAT-CAA AGCGCAATATTTTAC Rmet_1975 2152353 - 2150962 - | replicative DNA helicase TERM 1543 2152397 - 2152417 + r 100 -16.9 -4.0641 | opp_overlap 2152397 CGCGCAAACAAAAAA GGCAGGAGC GCG GCTCCTGCC TTTCTGTGCATCGCG TERM 1544 2152417 - 2152397 - R 100 -16.9 -5.63517 | opp_overlap 2152397 CGCGCAAACAAAAAA GGCAGGAGC GCG GCTCCTGCC TTTCTGTGCATCGCG rplI 2152926 - 2152474 - | 50S ribosomal protein L9 rpsR 2153235 - 2152957 - | 30S ribosomal protein S18 Rmet_1978 2153538 - 2153239 - | restart primosome assembly protein PriB rpsF 2153933 - 2153559 - | 30S ribosomal protein S6 Rmet_1980 2155052 - 2154051 - | asparaginase TERM 1545 2155481 - 2155497 + G 75 -6.5 -4.41494 | TGACGCGCAGCGACT CTGAACG ACC CGATCAG TTTTCGTTACCGATG Rmet_1981 2155258 - 2155914 + | LexA repressor Rmet_1982 2156038 - 2156211 + | hypothetical protein Rmet_1983 2156597 - 2156325 - | hypothetical protein Rmet_1984 2156866 - 2158482 + | aspartate aminotransferase TERM 1546 2160148 - 2160129 - g 72 -8.6 -4.13014 | gap 1 GCGAGACCGCGAAAA GCCAAGTGC CAG GC-CTTGGC TATACCGTGACCTAC Rmet_1985 2158538 - 2160223 + | YidE/YbjL duplication Rmet_1986 2160510 - 2160301 - | hypothetical protein TERM 1547 2160672 - 2160642 - H 86 -13.5 -3.53761 | gap 1, opp_overlap 2160649, overlap 2160630 2160643 2160649 GAAGCTTTGCCGAAA TGCAAAACAGCGCC CGGA GGCGCTGTTTTG-A CGACAATTCTTTGGG TERM 1548 2160672 - 2160643 - H 77 -15.1 -2.72043 | opp_overlap 2160649, overlap 2160630 2160642 2160649 AAGCTTTGCCGAAAT GCAAAACAGCGCC CGGA GGCGCTGTTTTGA CGACAATTCTTTGGG TERM 1549 2160649 - 2160666 + H 89 -12.7 -4.08692 | opp_overlap 2160649 2160642 2160643 TGCCGAAATGCAAAA CAGCGCC CGGA GGCGCTG TTTTGACGACAATTC TERM 1550 2160666 - 2160649 - H 100 -12.7 -4.35524 | opp_overlap 2160649, overlap 2160642 2160643 TGCCGAAATGCAAAA CAGCGCC CGGA GGCGCTG TTTTGACGACAATTC Rmet_1987 2160688 - 2160921 + | hypothetical protein Rmet_1988 2161135 - 2160875 - | hypothetical protein TERM 1551 2161512 - 2161539 + r 100 -11.3 -5.40072 | opp_overlap 2161527 2161530, overlap 2161530 CCTCGACATTCCCGT CAGGCGACCCT CAAACA AGCGTCGCCTG TTTTTTTACCAGGCA TERM 1552 2161703 - 2161685 - R 100 -12.4 -5.72616 | opp_overlap 2161682 2161685 ATGGAGACAAAAAAA GAGCCCGC AGC GCGGACTC TCAATTTGCGATCTC TERM 1553 2161841 - 2161821 - R 100 -14 -5.64873 | CCCAACAAGAAAAAA CAGCCCGC ACAAG GCGGGCTG GAAAATCAGTTGAAG TERM 1554 2161990 - 2162012 + r 70 -3.2 -4.60924 | overlap 2161986 2162000 GCATACATTTGCGCC CGGTCGCATG GAA CGAGCGTTCG TTTTTAGAACCTTTC Rmet_1989 2163114 - 2162059 - | tRNA-dihydrouridine synthase A TERM 1555 2163173 - 2163157 - H 79 -8.7 -4.15044 | CTTTTTCCGAACAAA GTGCCAC GAT GTAGCAC ACAACTACTCGCGTA TERM 1556 2163362 - 2163343 - g 86 -9.2 -4.56597 | GTCCTGGTTGAAAAA GCGGGAGC GGAA GCTCGCGC AACTTGGCCAACGAC Rmet_1990 2163200 - 2163421 + | hypothetical protein TERM 1557 2163563 - 2163579 + F 100 -10.8 -5.25803 | opp_overlap 2163563 CCCGCGACCTACATA GCGCCC TCGTT GGGCGC TTTTTTCTGCGACTT Rmet_1991 2163669 - 2164088 + | hypothetical protein TERM 1558 2164186 - 2164213 + F 73 -10.5 -3.59979 | opp_overlap 2164202 ACGGCGCCGTCTTCG CAGCGGAGCCC ATCAAC GGGTTCCGCGG TTTGCGCTGGGGCGA TERM 1559 2164540 - 2164512 - g 75 -4 -4.65916 | gap 2, overlap 2164513 2164514 TTCAGTCCAAGAAAA GCTCGCCATCGTTC AGG AAACGATGG--AGC CGGGTGCCACGGTTT Rmet_1992 2164423 - 2164824 + | transposase IS3/IS911 Rmet_1993 2164821 - 2165657 + | integrase catalytic subunit Rmet_1994 2165712 - 2165960 + | hypothetical protein Rmet_1995 2166477 - 2166923 + | hypothetical protein Rmet_1996 2167281 - 2166898 - | hypothetical protein TERM 1560 2167112 - 2167128 + g 86 -2.9 -5.14563 | GAGTCCACAAATTTG TGCATGT CAT ACGGGCA TTTTTTGGTGGCCGC TERM 1561 2167285 - 2167310 + H 91 -13.2 -3.74178 | opp_overlap 2167285 ACACAAAAACAAAAA GCCCGCGCGG CATGAA CCGAGCGGGC TTTCAAATTTGGTTG TERM 1562 2167310 - 2167285 - H 100 -13.9 -5.71295 | opp_overlap 2167285 ACACAAAAACAAAAA GCCCGCGCGGC ATGA ACCGAGCGGGC TTTCAAATTTGGTTG Rmet_1997 2167506 - 2168345 + | site specific recombinase TERM 1563 2168515 - 2168493 - T 90 -19.2 -3.07816 | opp_overlap 2168493 2168496, overlap 2168496 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 1564 2168493 - 2168515 + T 91 -19.2 -3.18264 | opp_overlap 2168493 2168496, overlap 2168496 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 1565 2168512 - 2168496 - T 90 -15.1 -3.68569 | opp_overlap 2168493 2168496, overlap 2168493 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 1566 2168496 - 2168512 + T 93 -15.1 -3.73647 | opp_overlap 2168496 2168493, overlap 2168493 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_1998 2168739 - 2168524 - | hypothetical protein Rmet_1999 2169626 - 2168793 - | ATPase Rmet_2000 2171062 - 2169623 - | integrase catalytic subunit Rmet_2001 2171743 - 2171174 - | hypothetical protein Rmet_2002 2171758 - 2172324 + | phage integrase Rmet_2003 2172321 - 2172926 + | hypothetical protein TERM 1567 2172980 - 2172935 - f 80 -10.7 -4.01137 | gap 1 CAGATAATCCAGAAA TCTGCCGCAAAAACAGCC GGAATTTTATT GGC-GTTTTTGCGGCAAA ACCCGGCAAACCCCC Rmet_2004 2173034 - 2173426 + | hypothetical protein Rmet_2005 2173434 - 2173736 + | hypothetical protein TERM 1568 2174319 - 2174277 - g 100 -10.4 -5.15117 | opp_overlap 2174290, overlap 2174291 CAAAATCGGAAAAAA TCGCCCCGTATCAAGGGGCA CAT TGCCCCGTATCGTGGGGCGA AATTGCCCCTCCGTA Rmet_2006 2173739 - 2174605 + | hypothetical protein Rmet_2007 2174707 - 2175276 + | hypothetical protein Rmet_2008 2175388 - 2176827 + | integrase catalytic subunit Rmet_2009 2176824 - 2177657 + | ATPase Rmet_2010 2177711 - 2177926 + | hypothetical protein TERM 1569 2177935 - 2177957 + F 90 -19.2 -3.07816 | opp_overlap 2177935 2177938, overlap 2177938 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 1570 2177957 - 2177935 - f 91 -19.2 -3.18264 | opp_overlap 2177935 2177938, overlap 2177938 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 1571 2177938 - 2177954 + F 90 -15.1 -3.68569 | opp_overlap 2177935 2177938, overlap 2177935 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC TERM 1572 2177954 - 2177938 - f 93 -15.1 -3.73647 | opp_overlap 2177938 2177935, overlap 2177935 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC Rmet_2011 2178199 - 2178678 + | hypothetical protein TERM 1573 2178763 - 2178744 - f 75 -8.5 -4.27316 | overlap 2178745 2178748 CGCCTGAAGCCAAAA CGCAGCG GCACGG CGCCGCG CAACACAACGGAGGT Rmet_2012 2178785 - 2179141 + | hypothetical protein Rmet_2013 2179134 - 2179424 + | hypothetical protein Rmet_2014 2179441 - 2179737 + | hypothetical protein TERM 1574 2179932 - 2179916 - f 84 -3.6 -5.24129 | overlap 2179917 TTGGGCCACAAAAAA TCCGGC GGAGG GCGGGA TAGCCGGGTTGAGGG TERM 1575 2180400 - 2180416 + G 81 -10.9 -4.10657 | CAGCCCGAGCGGGAG GACAAGC GCG GCTTGTC TTTTGCGCGCTATGC Rmet_2015 2180115 - 2181455 + | putative phage-related protein Rmet_2016 2181616 - 2182293 + | hypothetical protein TERM 1576 2182325 - 2182356 + T 87 -10.8 -4.39568 | gap 1, opp_overlap 2182325 2182318, overlap 2182328 2182348 TCAAGTAACAGGCAA CGCCCCGACCTCTCG CAA TGAGGGGGCGGG-CG TTTTACTGTCTGCGT Rmet_2017 2183306 - 2182359 - | hypothetical protein TERM 1577 2183492 - 2183436 - R 72 -12.7 -3.01924 | CACGGTTTCCGAAGA GCGGGCGGCCTTGGGGGCTGGTGGGCA AAT TGCCCACCAGCCCACGCGCACGGGCAC CAAATCCCGGTTAGT Rmet_2018 2183811 - 2183503 - | hypothetical protein Rmet_2019 2184271 - 2183867 - | hypothetical protein Rmet_2020 2184280 - 2184756 + | hypothetical protein TERM 1578 2184806 - 2184793 - T 100 -9.5 -5.45652 | opp_overlap 2184779 2184778 2184793 ACGGGCAACAAAAAA CCCGC CGTA GCGGG TTGCTTGTCTGCCGG TERM 1579 2185065 - 2185040 - T 100 -10.3 -5.2696 | opp_overlap 2185040 GGAAAATGCAAAAAA GCCCGCGCGGC GTGA ACCGTACGGGC TTTGGGCGTGACTCC TERM 1580 2185224 - 2185207 - T 91 -14.1 -3.94877 | AGCTGCCAACAAGAA CGGCGCC CAAA GGCGCCG TCACGATACTCGGAC Rmet_2021 2185815 - 2185255 - | NADPH-dependent FMN reductase TERM 1581 2185888 - 2185858 - R 71 -8.8 -3.76048 | overlap 2185855 TTCGAACGAAGAGAA GCCTGGTCCGCGAC AAC GCTGCGGGCCAGTC CAGCCGACACTCTAC Rmet_2022 2187060 - 2185909 - | enoyl-CoA hydratase TERM 1582 2187641 - 2187658 + G 78 -4.1 -4.72272 | ATCCTTGCAGTGGGA CTGAACC TGGC GTTTCAG TTTTTCGTGCACACG Rmet_2023 2187080 - 2188048 + | sterol desaturase-like protein TERM 1583 2188092 - 2188111 + T 100 -12.1 -5.4505 | opp_overlap 2188092 GCGCCCATAAAAAAA CCGCGCC ACACCG GGCGCGG TTTTTTCTTCAAGCG TERM 1584 2188111 - 2188092 - T 100 -12.1 -5.60993 | opp_overlap 2188092 GCGCCCATAAAAAAA CCGCGCC ACACCG GGCGCGG TTTTTTCTTCAAGCG Rmet_2024 2189958 - 2188135 - | GTP-binding protein TypA Rmet_2025 2190079 - 2190660 + | MarR family transcriptional regulator TERM 1585 2190781 - 2190818 + G 71 -13.4 -2.92171 | gap 1, overlap 2190779 2190783 TGGCGTTGCGGCCCG CACCGGCAGCCTGG-CC TTGAC GGTCCTGGCTGCCGCTG TCATTTCCGGCTGTG Rmet_2026 2190686 - 2192245 + | RND efflux system, outer membrane lipoprotein, NodT TERM 1586 2193513 - 2193455 - g 100 -26.7 -3.61715 | gap 2, opp_overlap 2193476 CATCTCCGTCAATAA CGGCGGCCGCACGCCGGCACCGGCGGCGC CGG GCGGCGCCAGCGC-GGCGCGCG-CAGCCG CCAAGCCTGCCAACA Rmet_2027 2192292 - 2193533 + | secretion protein HlyD TERM 1587 2193630 - 2193574 - g 77 -14.5 -2.82834 | gap 3, overlap 2193606 2193616 GATTCCATCACCACA GTGCCGGATTCCGGCGC-GGCTCCGGCC CCAA AGCCGAAGCCAGCGCCAG--CCCGGCAT GCCGCGCCCCCTCCG TERM 1588 2194787 - 2194823 + G 73 -9.4 -3.91473 | gap 2, opp_overlap 2194781 CGTCAATCATCCTGT CCGGCCAGCCGGCCGAGA AGA TCCCGGC-GGCTT-CCGG TTTGTCGAACTTTGT Rmet_2028 2193553 - 2195166 + | EmrB/QacA family drug resistance transporter TERM 1589 2195209 - 2195188 - T 100 -11.6 -5.49234 | opp_overlap 2195188 ACATCGAACAAAAAA GGCATCGG GTTTAT CCGATGCC TTTTTTACTTGGGCG TERM 1590 2195188 - 2195209 + T 100 -12.3 -5.26875 | opp_overlap 2195188 ACATCGAACAAAAAA GGCATCGGG TTTA TCCGATGCC TTTTTTACTTGGGCG truB 2196185 - 2195241 - | tRNA pseudouridine synthase B TERM 1591 2196229 - 2196202 - R 100 -13.4 -4.82667 | opp_overlap 2196215, overlap 2196203 GCAGGAGAGGAAAAA CGTGGTGCCGGC ATCC ACCGGCACCACT TGGGCACCCGTGGAC TERM 1592 2196228 - 2196203 - R 100 -16.9 -3.48877 | opp_overlap 2196215, overlap 2196202 CAGGAGAGGAAAAAC GTGGTGCCGGC ATCC ACCGGCACCAC TTGGGCACCCGTGGA rbfA 2196616 - 2196245 - | ribosome-binding factor A TERM 1593 2196644 - 2196667 + r 85 -12.4 -3.71645 | opp_overlap 2196646, overlap 2196646 GTGAGCAGAAGTGAA AACGGCAGGC CGGA GCCTGCCGTC TTTGCGTATCGCCTT TERM 1594 2196665 - 2196646 - R 100 -15 -4.33151 | opp_overlap 2196644 2196646 GAGCAGAAGTGAAAA CGGCAGGC CGGA GCCTGCCG TCTTTGCGTATCGCC TERM 1595 2196646 - 2196665 + r 90 -15 -3.43773 | opp_overlap 2196646, overlap 2196644 GAGCAGAAGTGAAAA CGGCAGGC CGGA GCCTGCCG TCTTTGCGTATCGCC infB 2199620 - 2196681 - | translation initiation factor IF-2 TERM 1596 2198858 - 2198892 + g 77 -12.9 -3.32844 | gap 2 CGGCGGCTTCGCGAC GGCGACGGGCGGCAGCA TCC TGCT-CCGCACG-CGCC TTGTCGGCTGCAGCC TERM 1597 2198936 - 2198964 + g 100 -9.6 -4.87786 | gap 1 GCTCGGCGCGCGCCT TGTCGACGGCAGC CTTG GC-GTCGTCGGCA TTTTTCTGCGCTTGC TERM 1598 2199049 - 2199071 + g 71 -10.5 -3.61894 | overlap 2199066 TCCTCGGCGGCGTCG GCTGCGGCC TGTGC GGCGGCAGC TTCTTCAGCAGCCTT nusA 2201179 - 2199704 - | transcription elongation factor NusA TERM 1599 2200631 - 2200658 + g 78 -7.6 -4.41494 | gap 1, opp_overlap 2200631, overlap 2200633 2200633 CACATTGAGGATATA CGCGCGCACACGG TCG CCG-GTGCGCAGG TTTTCCTTCGGGATG Rmet_2033 2201664 - 2201176 - | hypothetical protein TERM 1600 2201860 - 2201835 - R 100 -8.4 -6.23209 | gap 1, opp_overlap 2201835 2201858 CGAACCAAAAAAAAA TGGGCGCAATG CCCAT CATT-CGCCCA TCCTCGCCGAGGATG Rmet_2034 2203888 - 2201993 - | ribosomal large subunit pseudouridine synthase B Rmet_2035 2204825 - 2203917 - | condensin subunit ScpB Rmet_2036 2206143 - 2205376 - | putative transmembrane protein Rmet_2037 2206256 - 2206954 + | Crp/FNR family transcriptional regulator TERM 1601 2206970 - 2207016 + T 100 -20.2 -3.86015 | opp_overlap 2206976, overlap 2206976 CGAACGTCCTAGCCA GGAAAACGGCCGCACCTGGAAT TCA GTTCCCGGTGCGGCCGTTCTGC TTTCTACCAGCACTC TERM 1602 2207010 - 2206976 - T 100 -21.5 -4.2828 | opp_overlap 2206970 2206976 TCCTAGCCAGGAAAA CGGCCGCACCTGGAA TTCAG TTCCCGGTGCGGCCG TTCTGCTTTCTACCA TERM 1603 2206976 - 2207010 + T 100 -22.2 -3.64915 | opp_overlap 2206976, overlap 2206970 TCCTAGCCAGGAAAA CGGCCGCACCTGGAAT TCA GTTCCCGGTGCGGCCG TTCTGCTTTCTACCA Rmet_2038 2207283 - 2207038 - | hypothetical protein TERM 1604 2207274 - 2207245 - G 72 -8.5 -3.96148 | TCCGCCCATCAGAAA CGCCGGCCAAAGT ACCC ACATCAGCCAGCG GAGTCTCATGGGCGC Rmet_2039 2207516 - 2207280 - | hypothetical protein Rmet_2040 2209059 - 2207530 - | 4Fe-4S ferredoxin, iron-sulfur binding Rmet_2041 2210029 - 2209115 - | cytochrome c oxidase, cbb3-type, subunit III Rmet_2042 2210193 - 2210026 - | cytochrome c oxidase subunit Rmet_2043 2210863 - 2210198 - | cytochrome c oxidase, cbb3-type, subunit II Rmet_2044 2212329 - 2210881 - | cytochrome c oxidase, cbb3-type, subunit I TERM 1605 2212491 - 2212507 + r 77 -10.9 -3.56325 | AACGGTCACCTATAC GCCTTGA CAT TCAAGGC TTGTCGTTGTCGAGC Rmet_2045 2212647 - 2212501 - | cytochrome oxidase maturation protein, cbb3-type Rmet_2046 2215235 - 2212650 - | heavy metal translocating P-type ATPase TERM 1606 2213664 - 2213649 - G 71 -11.8 -3.28712 | overlap 2213600 2213650 GCCGCGCCGCGACAA CGCCGC GCCA GCGGCG GCCAGCGCCGCCGGA TERM 1607 2214273 - 2214255 - G 72 -11 -3.54382 | GGCCAACAGAAGGAA CGCGACGA ACA TCGTCACG GAATCGAAGTAGACC Rmet_2047 2216479 - 2215382 - | AFG1-like ATPase TERM 1608 2216537 - 2216511 - R 100 -22.3 -4.27316 | opp_overlap 2216503 2216502 GGCTGCAAGTGAAAA CGGCGCGCCGC GAATG GCGGCGCGCCG ATGCTCACACTTTGC Rmet_2048 2217989 - 2216565 - | dihydrolipoamide dehydrogenase Rmet_2049 2219374 - 2218115 - | dihydrolipoamide acetyltransferase TERM 1609 2219170 - 2219186 + g 74 -10.1 -3.76482 | TCACTTCATCGGCCA CGACGGT ATC GCCGTCG TTCTTGATGATCTGC kgd 2222320 - 2219468 - | alpha-ketoglutarate decarboxylase TERM 1610 2219660 - 2219642 - G 72 -13.2 -3.14564 | opp_overlap 2219645, overlap 2219645 GTAGTGCTGCACGAA GAACCAGG CAC CCTGGTTC TGCGGCTCGTCCTGG TERM 1611 2219657 - 2219645 - G 71 -9.1 -3.71848 | opp_overlap 2219645, overlap 2219642 GTGCTGCACGAAGAA CCAGG CAC CCTGG TTCTGCGGCTCGTCC TERM 1612 2222443 - 2222470 + r 71 -6.9 -4.2349 | opp_overlap 2222447, overlap 2222446 GGTTACCACCTTGAA CGAACGGCACC GTGTCA GGTGCCGCTAG TTTTCGGTCTCGCCG ugpQ 2223338 - 2222601 - | cytoplasmic glycerophosphodiester phosphodiesterase Rmet_2052 2224438 - 2223335 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 1613 2224347 - 2224359 + g 71 -9.1 -3.71873 | opp_overlap 2224347 2224346 ACTATCACGATGAAC TCGCC GTC GGCGA TTTCCATGTCGATGC Rmet_2053 2225296 - 2224448 - | binding-protein-dependent transport systems inner membrane component Rmet_2054 2226188 - 2225307 - | binding-protein-dependent transport systems inner membrane component TERM 1614 2226246 - 2226210 - R 81 -8.6 -4.64861 | overlap 2226216 GGTTCCCAAAACAAA CGCAAACGGGCGACGA TTGTG CCGCCGCCCGCTTCAG CTCCATCACCGCAGG TERM 1615 2226240 - 2226216 - R 86 -12.8 -3.98952 | overlap 2226210 CAAAACAAACGCAAA CGGGCGACGA TTGTG CCGCCGCCCG CTTCAGCTCCATCAC Rmet_2055 2227575 - 2226265 - | extracellular solute-binding protein Rmet_2056 2227781 - 2228587 + | HAD family hydrolase Rmet_2057 2228706 - 2230391 + | hyicolysin TERM 1616 2230396 - 2230421 + F 86 -13.3 -3.53012 | gap 1, opp_overlap 2230396 2230400 TGATTCAATAGTGAA TGCAGGGGCTGC GCA GCGGCCCC-GCA TTTCCGGAGACACCG Rmet_2058 2230438 - 2230746 + | hypothetical protein TERM 1617 2230792 - 2230765 - T 100 -19.2 -4.06533 | GAAACCATCAAATAA GAGAGGCCCCGC GAGC GCGAGGCCTCTC GATCCAGGTCCACAA Rmet_2059 2232410 - 2230824 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family Rmet_2060 2233642 - 2232479 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1618 2233100 - 2233112 + g 74 -10.5 -3.78778 | opp_overlap 2233082 GGCCGCGCCGCGAAT CCCGC CCA GCGGG TTCTTGATCTCGTGA Rmet_2061 2234121 - 2233648 - | putative signal peptide protein TERM 1619 2234153 - 2234142 - R 71 -5.8 -4.32034 | CGACCATCACCAAAA TGGG GAAG CCCA CACGCATCTGGTGCG TERM 1620 2234309 - 2234278 - R 84 -11.6 -4.08064 | opp_overlap 2234284, overlap 2234284 AACGTGGCCGCAAAA CAAAAAGGGACAGC CGAA GCCGCCCCTTCCTG GTGCAACTGTTGCCC TERM 1621 2234303 - 2234284 - R 100 -9.2 -5.45802 | opp_overlap 2234284, overlap 2234278 GCCGCAAAACAAAAA GGGACAGC CGAA GCCGCCCC TTCCTGGTGCAACTG Rmet_2062 2235766 - 2234351 - | L-glutamine synthetase TERM 1622 2234391 - 2234410 + g 74 -10 -3.7347 | TCAATCGGGTGAGTC GTCATGCG GAAA CGCGTGAC TTCTTCCATCTTCAG TERM 1623 2235706 - 2235722 + g 70 -5.1 -4.4078 | opp_overlap 2235706 2235699 CCGTGAAACGGAAAT CGACG AACTTCA CGTCG TTTTCGTTCACGAGC TERM 1624 2236629 - 2236615 - g 72 -11.4 -3.53012 | GCCGCCCGCTCGAAA CACGCG GCG CGCGTG GCGACGGAAAACGGT Rmet_2063 2236294 - 2236758 + | rhodanese-like protein Rmet_2064 2237587 - 2236787 - | molybdopterin binding domain-containing protein TERM 1625 2236843 - 2236870 + g 71 -7.6 -4.07885 | gap 1, overlap 2236844 CGAGCAGCATCGCGT AAGCCGGCCCGAC CAT GTCGG-CCGGCCC TTTTACGCCGAGGTC Rmet_2065 2238486 - 2237611 - | putative transmembrane protein TERM 1626 2238648 - 2238601 - R 72 -13.4 -2.64878 | opp_overlap 2238609, overlap 2238598 2238597 CCAGAAAGGAACCTA CCCCAGGCGCAGCAACCGCTTG ATGC CAAGCCATTGCTGCGACAGGAA GCCATCGCCGTAGCT Rmet_2066 2239593 - 2238598 - | putative transmembrane protein TERM 1627 2238789 - 2238819 + g 91 -8.9 -4.72272 | gap 1, overlap 2238784 2238783 CATAGTTGCACCCGC CGAGCCGCG-CGGG CTTT TCCGCCGTGGCGCG TTTTTCATGACCAAG Rmet_2067 2240468 - 2239593 - | polysaccharide deacetylase TERM 1628 2240380 - 2240358 - G 71 -13.4 -2.93747 | overlap 2240360 ATCAAACGTCAGATA GAGCGTGCCG GCT CGGCAGGCTC CGGGGCTGGCGTCGG Rmet_2068 2241468 - 2240482 - | YVTN beta-propeller repeat-containing protein Rmet_2069 2245551 - 2241601 - | ATP-dependent helicase HrpA TERM 1629 2246058 - 2246070 + G 71 -9.1 -3.70149 | opp_overlap 2246050 CCGAACACGCCGATG GCTGG CGC CCAGC TTTCCGTGGTGTCGG Rmet_2070 2245575 - 2247011 + | N-acetylglutamate synthase TERM 1630 2247168 - 2247146 - g 74 -10.6 -3.68936 | CATCAAGCTGAACAA GGAAGCCGAA GGC CTCGACTTCC CCCCGCTGCCGGGCG Rmet_2071 2247042 - 2247386 + | hypothetical protein Rmet_2072 2247655 - 2248938 + | major facilitator transporter Rmet_2073 2248975 - 2250357 + | nitrate transporter TERM 1631 2253961 - 2253937 - g 73 -12.2 -3.35679 | CGGCGGCATCCATAA CTCGGTCACC CGCGC GGTGACCAAG CCCACGCACATGATC Rmet_2074 2250389 - 2254147 + | respiratory nitrate reductase alpha subunit apoprotein TERM 1632 2254796 - 2254764 - g 80 -15 -3.14527 | gap 1, overlap 2254762 2254752 CAAGCGCGAGGAAGA CGGCA-TCGTCCTGG TCGA CCAGGACAAGTGCCG CGGCTGGCGCATGTG Rmet_2075 2254147 - 2255700 + | respiratory nitrate reductase beta subunit Rmet_2076 2255718 - 2256377 + | respiratory nitrate reductase chaperone NarJ Rmet_2077 2256415 - 2257098 + | respiratory nitrate reductase gamma subunit Rmet_2078 2257111 - 2257845 + | carbonic anhydrase TERM 1633 2258115 - 2258091 - g 75 -10 -3.89346 | gap 1, opp_overlap 2258091 GCGCTAGCCGACAAA CCGC-GCGACG GACT CGTCGCCACGG TGCTTCAGGGCAGGC Rmet_2079 2257848 - 2258237 + | hypothetical protein Rmet_2080 2258237 - 2259409 + | cytochrome d1, heme region Rmet_2081 2259412 - 2259861 + | AsnC family transcriptional regulator TERM 1634 2260109 - 2260133 + F 74 -12.2 -3.18912 | gap 1, opp_overlap 2260099 ATATACCGACACGCT CGGCGAACGCG TTGG CGCGTT-GCCG TTCGTGAGTCACTGC Rmet_2082 2260352 - 2261317 + | radical SAM family protein TERM 1635 2261690 - 2261674 - g 71 -10.1 -3.57144 | CGCTGGACCGCGAAA TCCGCGC CGC GCGCGAA CTCTCGGAAGGACGT Rmet_2083 2261436 - 2262617 + | 2-nitropropane dioxygenase, NPD Rmet_2084 2263955 - 2262621 - | hypothetical protein Rmet_2085 2264418 - 2263972 - | hemerythrin HHE cation binding region Rmet_2086 2264669 - 2266684 + | signal transduction histidine kinase, nitrate/nitrite-specific, NarQ Rmet_2087 2266681 - 2267334 + | two component LuxR family transcriptional regulator Rmet_2088 2268082 - 2267396 - | ribose-5-phosphate isomerase A TERM 1636 2267950 - 2267936 - G 71 -7.8 -4.07885 | opp_overlap 2267925, overlap 2267937 CACCGCGCCCGAAAA GCGCTC CTT GAACGC CGCCACGGCGTCGAT TERM 1637 2268112 - 2268099 - H 76 -6.7 -4.45485 | opp_overlap 2268098 ACTACAGCCAGAAAA GCGTT GGGA AACGC GTAGTGTAGCGGATT Rmet_2089 2268201 - 2269157 + | transaldolase B Rmet_2090 2269955 - 2269221 - | silent information regulator protein Sir2 Rmet_2091 2270701 - 2269958 - | RNA methyltransferase TrmH, group 3 Rmet_2092 2273375 - 2270745 - | RNAse R TERM 1638 2273273 - 2273247 - G 75 -12.2 -3.53224 | GAGCCGTTTCTGAAA GCCGTCATGCTC TTT GCGCGTGACGGC CAGGGCCTTGGCGAT TERM 1639 2273540 - 2273573 + H 100 -16.9 -4.65895 | opp_overlap 2273547, overlap 2273547 GGCACCAAGATTTGG CGAGAAACCCGCAAC ACAC GTTGCGGGTTTTTTG TTTTTGCGTCGCCGA TERM 1640 2273566 - 2273547 - H 91 -13.6 -3.86524 | opp_overlap 2273547 2273540 AGATTTGGCGAGAAA CCCGCAAC ACAC GTTGCGGG TTTTTTGTTTTTGCG TERM 1641 2273547 - 2273566 + H 100 -13.6 -5.93252 | opp_overlap 2273547, overlap 2273540 AGATTTGGCGAGAAA CCCGCAAC ACAC GTTGCGGG TTTTTTGTTTTTGCG Rmet_2093 2273795 - 2274229 + | BadM/Rrf2 family transcriptional regulator TERM 1642 2274211 - 2274229 + F 85 -3.7 -5.40474 | opp_overlap 2274205, overlap 2274212 AGTCGAACATGCCGC CCGGCGC CGCAA GCGCTGA TTTTTTTGCCCGGAT Rmet_2094 2274293 - 2274904 + | NAD-dependent epimerase/dehydratase Rmet_2095 2275642 - 2275034 - | phosphoribosyltransferase TERM 1643 2275667 - 2275639 - G 84 -12.3 -3.97368 | opp_overlap 2275639, overlap 2275642 TGGCCAATGGATAAA GCATCGGCCCGCA TAT CGCGGGCCGAGGA CTATCTGTGAGGCCG TERM 1644 2275664 - 2275642 - G 85 -17 -3.04203 | opp_overlap 2275639, overlap 2275639 CCAATGGATAAAGCA TCGGCCCGCA TAT CGCGGGCCGA GGACTATCTGTGAGG Rmet_2096 2277073 - 2275730 - | adenylosuccinate synthetase TERM 1645 2277246 - 2277224 - R 91 -8.4 -4.79223 | overlap 2277225 TGAGAGCACCAAAAA CGGCCGGA TCGCACG TCCGGCCA GGAAATTCAGCGAGG hisZ 2278404 - 2277253 - | ATP phosphoribosyltransferase regulatory subunit TERM 1646 2277500 - 2277487 - G 70 -5.9 -4.20531 | CAGATCCAGCGAAAA GCCCG TGGC CGGAC GAGCGCGACCAAAGG TERM 1647 2278482 - 2278466 - R 100 -13.7 -4.38712 | opp_overlap 2278466 TCCAGCCGGACAAAA CCCCGGA AGA TCCGGGG TTCTGTCGAATCACG TERM 1648 2278466 - 2278482 + r 86 -13.7 -3.50393 | opp_overlap 2278466 TCCAGCCGGACAAAA CCCCGGA AGA TCCGGGG TTCTGTCGAATCACG Rmet_2098 2279428 - 2278526 - | HflC protein Rmet_2099 2280783 - 2279440 - | HflK protein TERM 1649 2280724 - 2280694 - G 73 -12.4 -3.35679 | overlap 2280696 GTCGTTCAGCGAGAA GATGGCGCGCAGGC GCG GCCAGCGCGCAAAC CGCAGGGCGCGGCTG TERM 1650 2280722 - 2280696 - G 78 -13.6 -3.24924 | overlap 2280694 CGTTCAGCGAGAAGA TGGCGCGCAGGC GCG GCCAGCGCGCAA ACCGCAGGGCGCGGC Rmet_2100 2282124 - 2280889 - | small GTP-binding protein domain-containing protein TERM 1651 2282192 - 2282169 - R 76 -5.8 -4.66537 | overlap 2282170 GTTGTTAAGACAAAA TCTGGCCGCG TTGG CGCAGCCTGC CGCCCCCGGACGCCG hfq 2282587 - 2282348 - | RNA-binding protein Hfq engA 2284139 - 2282796 - | GTP-binding protein EngA TERM 1652 2284188 - 2284148 - R 79 -9.1 -4.20516 | gap 3, opp_overlap 2284153, overlap 2284154 2284156 GTTTCATTCAATAAA CGGAA-A-CAGGGGG-CGGC TCGC GCCGTCCCCCAGCTATTCCG GAGTCATGTTGATCC TERM 1653 2284180 - 2284154 - R 82 -11.5 -3.93262 | gap 1, opp_overlap 2284153, overlap 2284148 2284156 TTCAATAAACGGAAA CAGGGGG-CGGC TCGC GCCGTCCCCCAG CTATTCCGGAGTCAT TERM 1654 2284177 - 2284156 - R 79 -12.9 -3.54626 | opp_overlap 2284153, overlap 2284154 2284148 CAATAAACGGAAACA GGGGGCGGC TCGC GCCGTCCCC CAGCTATTCCGGAGT TERM 1655 2284245 - 2284278 + r 100 -13.1 -4.56597 | gap 1, overlap 2284247 GGCCGCTTTTCCTGT CGGCGGAACCGGAGCC TTG GGC-CCGATTCCGCAG TTTTTGGCACGACCA TERM 1656 2284247 - 2284276 + r 76 -14.3 -2.60032 | gap 1, overlap 2284245 CCGCTTTTCCTGTCG GCGGAACCGGAGCC TTG GGC-CCGATTCCGC AGTTTTTGGCACGAC TERM 1657 2284315 - 2284345 + r 100 -21.2 -3.10112 | ATGCTACCGGATTGG CGCCGCCCGTGC GACAGGG GCACGGGCGGCG TTGGGTGCGTTACGT Rmet_2103 2285522 - 2284371 - | Pyrrolo-quinoline quinone TERM 1658 2285402 - 2285424 + g 70 -5.4 -4.34008 | overlap 2285410 GCGTCGCCGCAATCG GCTTCAGCTC CGT GGGCGGATGC TTGTTTTCCTTGCTG Rmet_2104 2286188 - 2285556 - | hypothetical protein TERM 1659 2286248 - 2286222 - R 90 -14.4 -3.66784 | TTAGGTTGAATATAA CCGGCCGCCGTC AGG GACAACGACCGG GTGCTGCGATAGGGA hisS 2287615 - 2286272 - | histidyl-tRNA synthetase ispG 2288962 - 2287670 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Rmet_2107 2290066 - 2289011 - | XRE family transcriptional regulator Rmet_2108 2290835 - 2290059 - | TPR repeat-containing protein Rmet_2109 2291986 - 2290832 - | hypothetical protein TERM 1660 2290956 - 2290983 + g 85 -12.6 -4.12188 | CCAGCAAGCTGGCCA CACGCGGCGTCG ATGT CGTCGCCACGTG TTTTGCGGATCGTCG ndk 2292461 - 2292036 - | nucleoside diphosphate kinase Rmet_2111 2292802 - 2293509 + | hypothetical protein TERM 1661 2293548 - 2293533 - T 95 -6 -5.63103 | opp_overlap 2293534, overlap 2293534 TGCCAACGAAAAAAA GCCGCC CTCG GGCGGT TTTTTTCATGGGTGC TERM 1662 2293547 - 2293534 - T 73 -9.5 -3.96777 | opp_overlap 2293534, overlap 2293533 GCCAACGAAAAAAAG CCGCC CTCG GGCGG TTTTTTTCATGGGTG TERM 1663 2293534 - 2293547 + T 100 -9.5 -5.53991 | opp_overlap 2293533 2293534 GCCAACGAAAAAAAG CCGCC CTCG GGCGG TTTTTTTCATGGGTG rumA 2295050 - 2293575 - | 23S rRNA 5-methyluridine methyltransferase Rmet_2113 2295066 - 2295920 + | endonuclease/exonuclease/phosphatase Rmet_2114 2296758 - 2295922 - | hypothetical protein TERM 1664 2296751 - 2296700 - G 71 -10 -3.65351 | GGATGGTCATGCAAA CGGCGCAGGCCGTCGACATCGGGA ATTG TCTCGATGTCGAATACCAGCACAG GGGTCATAGAACGGC Rmet_2115 2297915 - 2296755 - | RNA polymerase sigma factor RpoS TERM 1665 2296825 - 2296858 + g 71 -9.5 -3.72695 | ACCAGCGCTTCCTGC TGGATCTGACGCACG CGCT CGCGCGTGAGACCCA TTTCCTCGGCCAGCT TERM 1666 2297160 - 2297186 + g 72 -3.6 -4.59773 | overlap 2297162 AGCGATGTCCTCGAG GCTGGCGTCG CGGCCAT CGGTGCCACC TTTTTCAAGATGGCG TERM 1667 2297335 - 2297325 - G 72 -8.2 -4.13014 | CGCATACGTCGAAAA GCGG AAT CCGC GCGAAGGATCGAATT TERM 1668 2297776 - 2297803 + g 71 -9.1 -3.71873 | overlap 2297777 2297779 TCGGCGACGGGTACC AGTTCGGCGGC CGGATC GTCGCCGAACA TTTCCGTGTCGATCC Rmet_2116 2298809 - 2297922 - | peptidase M23B Rmet_2117 2299726 - 2298818 - | protein-L-isoaspartate O-methyltransferase TERM 1669 2298865 - 2298853 - G 81 -3.3 -4.99645 | overlap 2298854 AGGGCACAAAGAAAA CCGCT TCA AGCGC AGTTCTGTGAAAACG surE 2300567 - 2299815 - | stationary phase survival protein SurE Rmet_2119 2300635 - 2301720 + | zinc-binding alcohol dehydrogenase Rmet_2120 2302580 - 2301789 - | binding-protein-dependent transport systems inner membrane component TERM 1670 2302182 - 2302161 - G 70 -2.2 -4.61633 | ATAGACGTTGAAAAA GACGATGA AGAACA CCAACGTC ACCGCCAGCGCCACC TERM 1671 2302341 - 2302305 - G 78 -14.3 -3.17392 | CACCGCCGAAGTGAA CGGGCTCAGCGCCAGCC ACA GGCCCACGCCCAGCCCG GACACGGTACCAATG Rmet_2121 2303420 - 2302608 - | ABC transporter-related protein TERM 1672 2303332 - 2303361 + g 71 -12.8 -3.01712 | ATGGATAGCGTGACG TCGCGCACAGCG GTATAG CGCTGCGCGCGG TCTTCGCGCGAGACG Rmet_2122 2304566 - 2303523 - | extracellular solute-binding protein Rmet_2123 2305718 - 2304738 - | hypothetical protein TERM 1673 2305474 - 2305506 + g 71 -9.9 -3.78934 | gap 1, overlap 2305476 TTGGCCCGTTGCACA GCCTGCGCGGCAAT CGTGCC ATTGCCGCCC-GGC TTGTTGTCCACCACC Rmet_2124 2306757 - 2305777 - | hydroxymethylglutaryl-CoA lyase Rmet_2125 2307950 - 2306754 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_2126 2309021 - 2308116 - | LysR family transcriptional regulator TERM 1674 2308885 - 2308866 - G 76 -5.6 -4.58395 | gap 1, overlap 2308868 GGCATGGCGGAAAAA CAGCGG-CG CCC CGACCGCGG TCTCCAGGTCGGAGA recR 2309642 - 2309028 - | recombination protein RecR Rmet_2128 2309997 - 2309671 - | hypothetical protein Rmet_2129 2312465 - 2310078 - | DNA polymerase III subunits gamma and tau Rmet_2130 2315060 - 2312562 - | ribonucleotide reductase large subunit TERM 1675 2314662 - 2314610 - G 79 -15.3 -2.93723 | overlap 2314605 CCTTCATGAACGACA CCGGCCCCGATGCGCGCGAGTGCGT GGC ACGCACCAGCGCGCCACCCGGCCTG ATCGAGGAAAAGTCA TERM 1676 2314902 - 2314881 - G 90 -11.5 -4.42062 | opp_overlap 2314882, overlap 2314882 CAGCGCCCAAAGAAA GCGCGAGGC CCAG GCCTCGCGT TTGTCGGCAGGTTCC TERM 1677 2314901 - 2314882 - G 83 -15 -3.24755 | opp_overlap 2314882, overlap 2314881 AGCGCCCAAAGAAAG CGCGAGGC CCAG GCCTCGCG TTTGTCGGCAGGTTC TERM 1678 2314882 - 2314901 + g 91 -15 -3.86822 | opp_overlap 2314882 2314881 AGCGCCCAAAGAAAG CGCGAGGC CCAG GCCTCGCG TTTGTCGGCAGGTTC TERM 1679 2314972 - 2314985 + g 75 -3.1 -4.7373 | gap 1, overlap 2314973 TCAATGGTCTGCTCC T-CGCC CTT GGCGTA TTTTTCCTGGAGTAC TERM 1680 2314973 - 2314983 + g 72 -8.2 -3.98658 | overlap 2314972 CAATGGTCTGCTCCT CGCC CTT GGCG TATTTTTCCTGGAGT Rmet_2131 2319014 - 2315451 - | DNA helicase/exodeoxyribonuclease V, subunit A TERM 1681 2317286 - 2317316 + g 73 -9.1 -3.92869 | overlap 2317275 GCCAGGCTGCCACGC GGCGACCTTCCT-CG TAA CGCAGGGA-GTCGCC TTTCTGCGTGCGTGG TERM 1682 2318113 - 2318103 - G 74 -4.6 -4.58395 | CGCATCGGTGAAAAA CGCG GCA CGCA GCAACTGGAATGCGT Rmet_2132 2321941 - 2319011 - | DNA helicase/exodeoxyribonuclease V, subunit B Rmet_2133 2322278 - 2322003 - | hypothetical protein TERM 1683 2322945 - 2322932 - g 70 -5.9 -4.2679 | overlap 2322933 2322935 CAACGTGGATGAAAA CCAGC AAGT GCCGG CCAAGTTCGGCATTC Rmet_2134 2322741 - 2323067 + | thioredoxin rho 2323249 - 2324511 + | transcription termination factor Rho TERM 1684 2324534 - 2324568 + F 79 -13.1 -3.53091 | gap 1, opp_overlap 2324542, overlap 2324542 CTGGTAGTCCATCCT GATAAAAAGGCGTACC CTTG GGTGCGCCTTTTT-TC TTTCGCCCCCCCCCT TERM 1685 2324542 - 2324561 + F 100 -11.4 -5.63517 | opp_overlap 2324542, overlap 2324534 CCATCCTGATAAAAA GGCGTACC CTTG GGTGCGCC TTTTTTCTTTCGCCC TERM 1686 2324561 - 2324542 - f 100 -9.2 -4.84359 | opp_overlap 2324542 2324534 CCATCCTGATAAAAA GGCGTACC CTTG GGTGCGCC TTTTTTCTTTCGCCC Rmet_2136 2324594 - 2325484 + | hypothetical protein Rmet_2137 2325652 - 2325912 + | 50S ribosomal protein L31P TERM 1687 2325976 - 2326008 + F 95 -15.8 -3.85698 | gap 1, opp_overlap 2325983, overlap 2325983 CCGCGGCGCGCGACC TGACAAAGAGGCAGC ATCG GCTGCCTCTTTG-CA TTTGTGCCCCCACAA TERM 1688 2326002 - 2325983 - f 91 -13.6 -3.89346 | opp_overlap 2325983 2325976 GCGCGACCTGACAAA GAGGCAGC ATCG GCTGCCTC TTTGCATTTGTGCCC TERM 1689 2325983 - 2326002 + F 91 -13.6 -3.89215 | opp_overlap 2325983, overlap 2325976 GCGCGACCTGACAAA GAGGCAGC ATCG GCTGCCTC TTTGCATTTGTGCCC Rmet_2138 2326049 - 2327851 + | putative inner membrane transmembrane protein Rmet_2139 2327927 - 2329276 + | MATE efflux family protein TERM 1690 2329303 - 2329320 + T 89 -12.7 -4.13654 | opp_overlap 2329303 GGCGCACAGAAAAAA TGCCCGC GTAT GCGGGCA TTTCTAATTTGGCGA TERM 1691 2329320 - 2329303 - T 100 -12.7 -5.36441 | opp_overlap 2329303 GGCGCACAGAAAAAA TGCCCGC GTAT GCGGGCA TTTCTAATTTGGCGA TERM 1692 2329452 - 2329469 + T 89 -12.7 -4.13654 | opp_overlap 2329452 TACAGACGAAAAAAA TGCCCGC TTGC GCGGGCA TTTCTAATTTGGCGG TERM 1693 2329469 - 2329452 - T 100 -12.7 -5.60864 | opp_overlap 2329452 TACAGACGAAAAAAA TGCCCGC TTGC GCGGGCA TTTCTAATTTGGCGG TERM 1694 2329984 - 2329964 - T 80 -11.3 -3.84451 | opp_overlap 2329916, overlap 2329959 TCGGGTAAATCGAAA GGTGATTAT CAG ATAATCACC TCTCACCCAAATAAA TERM 1695 2330025 - 2330002 - T 100 -13.9 -5.30616 | overlap 2330021 TCACCCAAATAAAAA CCCGCTTGG TTTCAC CCAAGCGGG CTCAGTCTGGCGGAG TERM 1696 2330112 - 2330156 + T 82 -11.6 -3.93288 | gap 2, opp_overlap 2330150, overlap 2330113 GAACTACCGCTCCTT TGT-CGGTT-GCTGTCCGAAGC TTC GCTCCGGACAGCCAACTGGACG TTTGATTACGTCCAA TERM 1697 2330113 - 2330155 + T 70 -12.9 -2.95652 | gap 2, opp_overlap 2330150, overlap 2330112 AACTACCGCTCCTTT GT-CGGTT-GCTGTCCGAAGC TTC GCTCCGGACAGCCAACTGGAC GTTTGATTACGTCCA TERM 1698 2330496 - 2330527 + T 73 -4.2 -4.61527 | opp_overlap 2330489, overlap 2330520 CGAGATTATGCTGAA GTCTCGACCAGAGC GCAA GCCCCAGCCGAGAC TTTTTCAGCAGTTTT gltX 2331940 - 2330543 - | glutamyl-tRNA synthetase TERM 1699 2331984 - 2331959 - H 100 -16.1 -5.27335 | TCGGGGAAACAAAAA GGCCCGCGCAC GGAT GCGCGCAGGCC GGATGTCAGGGAATG Rmet_2141 2332136 - 2333086 + | patatin TERM 1700 2333101 - 2333087 - T 73 -9.2 -3.88232 | GTCGCGACACAATAA GCAGCG ACA CGCCGC GCCCGAACATCGCTC TERM 1701 2333174 - 2333129 - T 95 -15.7 -3.90744 | opp_overlap 2333143, overlap 2333131 2333143 CTCTCCCCCAAACAA CACACAACAAAAAAGGACTGC CTGA GCAGTCCTTTTTTGTTTTGCC TTCGGGATTTGCCGC TERM 1702 2333172 - 2333131 - T 100 -20.5 -3.54488 | opp_overlap 2333143, overlap 2333129 2333143 CTCCCCCAAACAACA CACAACAAAAAAGGACTGC CTGA GCAGTCCTTTTTTGTTTTG CCTTCGGGATTTGCC TERM 1703 2333143 - 2333160 + T 100 -11.3 -5.80951 | opp_overlap 2333131 2333129 2333143 ACACACAACAAAAAA GGACTGC CTGA GCAGTCC TTTTTTGTTTTGCCT TERM 1704 2333160 - 2333143 - T 100 -11.3 -5.62045 | opp_overlap 2333143, overlap 2333131 2333129 ACACACAACAAAAAA GGACTGC CTGA GCAGTCC TTTTTTGTTTTGCCT Rmet_2142 2333900 - 2333220 - | NLP/P60 Rmet_2143 2335907 - 2334258 - | ABC transporter-related protein TERM 1705 2334312 - 2334328 + g 71 -9.4 -3.70902 | TGTATACGAATGTTG CGGTGC GCCGA GCACCG TTTCGGTCTCGCCCG Rmet_2144 2337034 - 2335904 - | binding-protein-dependent transport systems inner membrane component TERM 1706 2336543 - 2336498 - G 77 -12.5 -3.61398 | CCGGCCGCCGAAGAA CCCCATCAGCGCGCCCGTCAG CGTG CCGACCAGCACGCCGATGACG GTCAGTGCCAGCCCA Rmet_2145 2338080 - 2337031 - | binding-protein-dependent transport systems inner membrane component Rmet_2146 2340084 - 2338099 - | extracellular solute-binding protein Rmet_2147 2340195 - 2340977 + | enoyl-(acyl carrier protein) reductase TERM 1707 2341007 - 2341027 + T 100 -15.4 -5.47159 | CGCCCCTGCGATCCA GGCGCCCC AACAC GGGGCGCC TTTTTGTTTCTTCAG Rmet_2148 2341992 - 2341039 - | LysR family transcriptional regulator TERM 1708 2341536 - 2341510 - G 73 -12.2 -3.31415 | overlap 2341505 CACGACGAAATCCAA CCGCTCGGCGCG CAA CGCGTCAAGCAG CGCGCGAGGATCACT TERM 1709 2341635 - 2341602 - G 81 -13.1 -3.68351 | overlap 2341634 GGTGCAGCAGGCAAA GCACCTCCGGCAGCA GCAT CGCTGCCGGAAAGGC GCCGAGTCCGATCTG Rmet_2149 2342034 - 2344007 + | beta-lactamase-like protein Rmet_2150 2344147 - 2346036 + | flagellin-like protein TERM 1710 2346088 - 2346037 - f 83 -16.7 -2.52464 | gap 2 CTGGGCCGGAACTGA TTGCGGCCGACGTCAGCGGCATGGC ACAG GCCCCGCCGCTGACGTCG-CGG-AA TCGATCGCGGGCCGG TERM 1711 2346720 - 2346733 + G 74 -5.2 -4.4768 | TCGGGAGTTTTCACC CCGG TCGCTC CCGG TTTCTTGTGTTCCTG Rmet_2151 2346608 - 2348353 + | penicillin-binding protein, transpeptidase TERM 1712 2349442 - 2349403 - g 74 -10.1 -3.71527 | CGCTAACCATTCAAA CCGCCACGCA-GGCAGCCG CTTA CGA-TGCCCTGCATGACGG CCTGCTTCGCGCCCA Rmet_2152 2348481 - 2350802 + | penicillin-binding protein 1A Rmet_2153 2350869 - 2351510 + | two component LuxR family transcriptional regulator Rmet_2154 2351526 - 2353973 + | Hpt sensor hybrid histidine kinase TERM 1713 2354616 - 2354589 - g 81 -17 -2.77701 | overlap 2354586 2354584 2354591 2354604 ATTCGACCAACATCA CACCCGACCCCG AAAC CGGGATCGGGCG ATACAGCTTCGCGCA TERM 1714 2354614 - 2354591 - g 81 -16 -2.93348 | overlap 2354589 2354586 2354584 2354604 TCGACCAACATCACA CCCGACCCCG AAAC CGGGATCGGG CGATACAGCTTCGCG Rmet_2155 2354267 - 2356453 + | cytochrome c, class I Rmet_2156 2357123 - 2357656 + | hypothetical protein Rmet_2157 2357720 - 2358049 + | hypothetical protein Rmet_2158 2358094 - 2358663 + | hypothetical protein Rmet_2159 2358807 - 2359403 + | hypothetical protein TERM 1715 2359548 - 2359518 - f 88 -4 -5.47218 | GCTGACGGAAAAAAA CAAGCAGCGAACTA CGA CATTTCACTGATTG TTGGCTAAAGTGCTG Rmet_2160 2359623 - 2360255 + | hypothetical protein Rmet_2161 2361757 - 2360306 - | hypothetical protein Rmet_2162 2363073 - 2361754 - | hypothetical protein TERM 1716 2363235 - 2363258 + H 77 -11 -3.58905 | opp_overlap 2363234 AGTTCTCCGCAACAC TCTTGGGCAC CATG GCGCCCAAGA TTATGTCTCCGCAAT TERM 1717 2363579 - 2363566 - H 78 -2.3 -5.14563 | opp_overlap 2363566 TCTCCGACCAAAAAA TGCCG CATA CTGCA TATTTTGAGATATAC TERM 1718 2364013 - 2364035 + G 72 -11.2 -3.55563 | overlap 2364010 TTGCGAGCCCTGTCG GCCGCGGACG ATG TGTCAGCGGC TTTCCAGCGTCGAAT Rmet_2163 2363695 - 2365827 + | XRE family transcriptional regulator Rmet_2164 2365944 - 2367812 + | KAP P-loop Rmet_2165 2367812 - 2368684 + | hypothetical protein TERM 1719 2369766 - 2369754 - g 76 -9.1 -4.07568 | TCGGCTCTCTGAAAA GTCGG CGG CCGAC GACCCGATGGCGGTA Rmet_2166 2368681 - 2369940 + | hypothetical protein Rmet_2167 2369937 - 2370686 + | TatD-related deoxyribonuclease Rmet_2168 2370835 - 2371083 + | hypothetical protein Rmet_2169 2372035 - 2371388 - | hypothetical protein TERM 1720 2371858 - 2371846 - G 76 -5.5 -4.52873 | opp_overlap 2371856 2371857, overlap 2371850 GCGGCACAAAAACAA GCAAC AGG GTCGC GTCACAGACGCCTTC Rmet_2170 2372993 - 2372325 - | hypothetical protein Rmet_2171 2375995 - 2372993 - | hypothetical protein TERM 1721 2374485 - 2374499 + g 100 -7.8 -5.68023 | CTCATACTGACATGC GGAGTC CAC GGCTCC TTTTTTTGCTTATCA TERM 1722 2374943 - 2374925 - G 79 -2.3 -5.08169 | gap 1, opp_overlap 2374925 2374927, overlap 2374915 2374913 2374927 ATAGACGCCAAAAAA GC-GCCGG GGTA CTGGCTGC TTCCTGGTTGCCTTG TERM 1723 2375074 - 2375057 - G 71 -9.1 -3.71991 | GATAAATTCGAAGAA CCCCTGC AATT GCAGGAG ACTTCCATAGTAGCC TERM 1724 2375289 - 2375275 - G 72 -2.8 -4.68724 | GCAGGTAATAGAAAA GATAGA TAT TCCACC AACCTATGATTCCCT Rmet_2172 2377771 - 2376377 - | phage integrase TERM 1725 2376436 - 2376452 + g 77 -5.1 -4.59773 | CGCGAAGCGCTTCGA GCTTAAG CTC CATAAGC TTTTTCGGCGTGCCA Rmet_2173 2379431 - 2378181 - | diguanylate cyclase TERM 1726 2379985 - 2380010 + H 100 -16.9 -5.49234 | opp_overlap 2379985 2379978 AGGCAGAAGATTGAA CGGCTTACGCC TCAC GGCGTAGGCCG TTTTTTCTTGCCTGT TERM 1727 2380010 - 2379985 - H 82 -14.7 -3.21993 | opp_overlap 2379985, overlap 2379978 AGGCAGAAGATTGAA CGGCTTACGCC TCAC GGCGTAGGCCG TTTTTTCTTGCCTGT Rmet_2174 2380738 - 2380959 + | translation initiation factor IF-1 TERM 1728 2381004 - 2381038 + F 100 -22.3 -5.45802 | gap 1 CGCTACGGACACTGA CGGGCTATCCGG-GGG CAAT CCCGCCGGATAGCCCG TTTTTGTTTTCGGCG Rmet_2175 2381122 - 2381598 + | putative phosphohistidine phosphatase, SixA TERM 1729 2381880 - 2381924 + G 88 -17.8 -3.17051 | overlap 2381878 TACCCAGCCGCTCTT CGACTCCTTGCCCACTGGCC TGACC GGCCAGTCGGCGCGGAGGCG TCTTCCTCGTCAGCC Rmet_2176 2381845 - 2382696 + | ornithine-acyl[acyl carrier protein] N-acyltransferase TERM 1730 2382765 - 2382734 - T 100 -21.8 -3.55444 | opp_overlap 2382739, overlap 2382739 CTCTGACCTGGCAAA CAAAACGGCGACTC CCTG GAGTCGCCGTTTTG CATCGCAGGCCACGT TERM 1731 2382739 - 2382760 + T 100 -15.9 -4.18018 | opp_overlap 2382734 2382739 ACCTGGCAAACAAAA CGGCGACTC CCTG GAGTCGCCG TTTTGCATCGCAGGC TERM 1732 2382760 - 2382739 - T 100 -15.9 -4.87133 | opp_overlap 2382739, overlap 2382734 ACCTGGCAAACAAAA CGGCGACTC CCTG GAGTCGCCG TTTTGCATCGCAGGC Rmet_2177 2384351 - 2382819 - | Ppx/GppA phosphatase Rmet_2178 2384501 - 2386582 + | polyphosphate kinase TERM 1733 2386594 - 2386644 + T 76 -13.6 -3.05384 | gap 1, opp_overlap 2386606, overlap 2386606 CTGAACGGCGCACCT TGCAA-GCAAAAAGGCCGCTTCT CCGATA GGAAGCGGCCTTTTTGTATTGGA TTCGCTGAAGCAGCG TERM 1734 2386631 - 2386606 - T 100 -11.9 -4.8622 | gap 1, opp_overlap 2386606 2386594 CCTTGCAAGCAAAAA GGCCGCTTCTCC GAT AG-GAAGCGGCC TTTTTGTATTGGATT TERM 1735 2386606 - 2386631 + T 100 -12.6 -5.1167 | opp_overlap 2386606, overlap 2386594 CCTTGCAAGCAAAAA GGCCGCTTCT CCGATA GGAAGCGGCC TTTTTGTATTGGATT Rmet_2179 2388023 - 2386671 - | periplasmic sensor signal transduction histidine kinase Rmet_2180 2388854 - 2388147 - | two component transcriptional regulator Rmet_2181 2389595 - 2388891 - | phosphate uptake regulator, PhoU Rmet_2182 2390454 - 2389666 - | phosphate ABC transporter permease pstA 2391378 - 2390476 - | phosphate transporter permease subunit pstC 2392340 - 2391375 - | phosphate transporter permease subunit TERM 1736 2391930 - 2391912 - G 75 -14.6 -2.70932 | CGGCTTCTGGAAGTA CTCGCCGA AGA TCGGCGAG AACACGAGCAGACCC TERM 1737 2392410 - 2392352 - R 85 -16.6 -2.84962 | gap 1, overlap 2392351 2392409 CCATGATGAAAAGAT CGATGGGTGAATCGGAGCCGCGGCGGC ATATCA GCCGCCGCGGCACCCGT-CACGCAACG CCGGGGCGCGACCCC Rmet_2185 2393485 - 2392454 - | periplasmic phosphate binding protein TERM 1738 2393023 - 2392997 - G 77 -13.1 -3.36273 | gap 1, opp_overlap 2392999 GTTCGTGAAGATGAA CGTCGTGCCCGA GCCG TCGG-CACGACG CACCGGCAGGATGTC TERM 1739 2393756 - 2393734 - R 100 -15.6 -5.26119 | TTGCGAAAAAGAAAA GGCCACGACA CAG TGCCGTGGCC TTCCGACAGCGTTGG Rmet_2186 2395132 - 2393789 - | phosphoglucosamine mutase TERM 1740 2395101 - 2395065 - G 71 -4.4 -4.4648 | gap 2, opp_overlap 2395067, overlap 2395066 2395067 AGTCGCATCACAAAA TCCGGCGT--GATCGGCG CGT CGCCGACCCGACCCCGCA CGCCGTCTGTCCCGA Rmet_2187 2396007 - 2395138 - | dihydropteroate synthase TERM 1741 2396052 - 2396032 - R 100 -11.8 -5.79595 | CCTGAAAACAAAAAA GCCGGCGC GCAAG GCACCGGC CTGAGAGGCTATCAG TERM 1742 2396088 - 2396071 - R 73 -9.1 -3.97388 | opp_overlap 2396071 AGAGGCTATCAGAAA CCAGCCC TTGC GAGCTGG TCTCTGCGTGTCACC Rmet_2188 2398069 - 2396120 - | ATP-dependent metalloprotease FtsH TERM 1743 2396615 - 2396582 - G 71 -12.5 -3.18582 | gap 1, overlap 2396584 CATGGCATTGAGGAA CA-CCTCTTCGGCAGC GCG GCCGCCGAACAGGATG GCAATTTCCTCAAGC TERM 1744 2396612 - 2396584 - G 80 -15.3 -3.1552 | overlap 2396582 TGGCATTGAGGAACA CCTCTTCGGCAGC GCG GCCGCCGAACAGG ATGGCAATTTCCTCA TERM 1745 2397278 - 2397290 + g 71 -9.1 -3.6968 | opp_overlap 2397272, overlap 2397244 GTCGATGAACACGAT GCAGG GGG CCTGC TTCTTGGCGTTCTCG Rmet_2189 2398888 - 2398223 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 1746 2398933 - 2398961 + H 78 -5.2 -4.86033 | gap 1 GGTTTGGCGGGATTG GCACCGCA-AGTC GAAC GACCGTGCGGAGC TTTTTCTCCCGATTT Rmet_2190 2399045 - 2399554 + | hypothetical protein TERM 1747 2399561 - 2399543 - T 70 -4.5 -4.52415 | overlap 2399544 AGCCAGAAGAAGAAA GCACTGG GTTGA CCAGTGG CCGAATCGGCCAGTT TERM 1748 2399602 - 2399587 - T 100 -11.8 -4.72986 | opp_overlap 2399587 CAGTTCCACCAAAAA GGCGGC CGAG GCCGCC TTTTTTCACACCTTT TERM 1749 2399587 - 2399602 + T 100 -11.8 -5.03747 | opp_overlap 2399587 CAGTTCCACCAAAAA GGCGGC CGAG GCCGCC TTTTTTCACACCTTT Rmet_2191 2400111 - 2399620 - | putative transmembrane protein greA 2400648 - 2400127 - | transcription elongation factor GreA TERM 1750 2400857 - 2400893 + r 81 -15.9 -2.90571 | opp_overlap 2400844, overlap 2400864 CAGGCCAGCTGCTTG TGCAGGCCCTGCAGGTC GTA GACCTCCAGGTTCTGCA TGTGCTTGAGGCCTT TERM 1751 2400864 - 2400886 + r 72 -12 -3.41013 | overlap 2400857 GCTGCTTGTGCAGGC CCTGCAGGTC GTA GACCTCCAGG TTCTGCATGTGCTTG carB 2404089 - 2400841 - | carbamoyl phosphate synthase large subunit TERM 1752 2403581 - 2403593 + g 74 -10.5 -3.73224 | ATCACGATCGGGTAG CCGGC GGT GCCGG TTTCCTGGGCGATGC Rmet_2194 2404831 - 2404160 - | leucine export protein LeuE Rmet_2195 2406014 - 2404866 - | carbamoyl phosphate synthase small subunit Rmet_2196 2406748 - 2406335 - | endoribonuclease L-PSP Rmet_2197 2407203 - 2406784 - | thioesterase superfamily protein TERM 1753 2407156 - 2407140 - G 75 -6.5 -4.37092 | AGCGCGGGTAGAAAA CGATGCC GGC GGTATCG CAATGCTTGAAACGC Rmet_2198 2408867 - 2407206 - | AMP-dependent synthetase and ligase Rmet_2199 2410055 - 2408889 - | acyl-CoA dehydrogenase-like protein Rmet_2200 2410916 - 2410065 - | enoyl-CoA hydratase Rmet_2201 2411741 - 2410947 - | short-chain dehydrogenase/reductase SDR Rmet_2202 2414119 - 2411744 - | salicylyl-CoA 5-hydroxylase Rmet_2203 2416157 - 2414268 - | propionyl-CoA synthetase TERM 1754 2415093 - 2415081 - G 71 -9.1 -3.71848 | GCCCGCCAGGAACAA CAGCC GCA GGCTG GACAGGTCGTGACGC Rmet_2204 2417289 - 2416240 - | glycerophosphoryl diester phosphodiesterase TERM 1755 2417352 - 2417388 + r 81 -13.7 -3.30969 | gap 1, overlap 2417345 TTCGCGGCGTCAGGA GGTG-GCCGCGCGCAG ATGCTA CTGCGCGCGGCTCGAC TTGGATTTGGTCGCT Rmet_2205 2419082 - 2417370 - | lytic transglycosylase, catalytic Rmet_2206 2420019 - 2419219 - | beta-lactamase-like protein TERM 1756 2420114 - 2420065 - g 77 -12.2 -3.64755 | gap 1, overlap 2420066 ATAGATTGGGAAGAA TGGCTAGCCTCGCCACCCGGGCA GTATG TGCTCGAGTGGGAAGGCCAG-CA GTACGACCGGACGGT TERM 1757 2420114 - 2420066 - g 71 -13.8 -2.78371 | overlap 2420065 TAGATTGGGAAGAAT GGCTAGCCTCGCCACCCGGGCA GTATG TGCTCGAGTGGGAAGGCCAGCA GTACGACCGGACGGT Rmet_2207 2420032 - 2420826 + | methyltransferase type 11 rnhA 2420845 - 2421282 + | ribonuclease H Rmet_2209 2421305 - 2422030 + | DNA polymerase III subunit epsilon TERM 1758 2422266 - 2422291 + T 100 -8.9 -5.62045 | TAACGTTGCCGTGAA CCCGGATCGCT GACG AGCTTTCCGGG TTTTTTGTTGTCTGT Rmet_2210 2422700 - 2422413 - | hypothetical protein Rmet_2211 2422849 - 2425587 + | ATPase, E1-E2 type Rmet_2212 2425612 - 2426505 + | hypothetical protein Rmet_2213 2427312 - 2426629 - | Cob(II)yrinic acid a,c-diamide reductase Rmet_2214 2428012 - 2427416 - | hypothetical protein TERM 1759 2427623 - 2427637 + g 75 -4.2 -4.59773 | overlap 2427625 GGCCAGCGACCGGTA CGGATC GTC GATCAG TTTTTCCAGATGGGA TERM 1760 2428140 - 2428102 - R 100 -19.7 -4.55295 | CGTCTCATAAAGAAA GCGGCCCTGGTTCCC GCAAGTATA GGAAACCAGGGCCGC CCCTCCGCTCGGCAC Rmet_2215 2429775 - 2428177 - | rhodanese-like protein Rmet_2216 2430392 - 2429772 - | cysteine dioxygenase type I Rmet_2217 2431703 - 2430495 - | Acyl-CoA dehydrogenase TERM 1761 2432623 - 2432608 - g 70 -6 -4.29738 | overlap 2432609 GGACACCGAGGAAAA GGCGTG GGCG CGCGCC GACAGCATCCTGGAA Rmet_2218 2431898 - 2432989 + | luciferase-like protein Rmet_2219 2433026 - 2434051 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components Rmet_2220 2434056 - 2435099 + | binding-protein-dependent transport systems inner membrane component Rmet_2221 2435093 - 2435881 + | ABC transporter-related protein TERM 1762 2436577 - 2436547 - g 70 -11 -3.38207 | overlap 2436543 2436548 CATCGAATACACCAA GGCGCTGGCAGCCG GCA CTGCCGCCAGCACG TTCGGCACCTGGCCG TERM 1763 2436576 - 2436548 - g 74 -14.5 -2.62442 | overlap 2436547 2436543 ATCGAATACACCAAG GCGCTGGCAGCCG GCA CTGCCGCCAGCAC GTTCGGCACCTGGCC Rmet_2222 2435897 - 2437084 + | cytochrome c, class I Rmet_2223 2437227 - 2437916 + | hypothetical protein Rmet_2224 2438893 - 2437871 - | lipopolysaccharide heptosyltransferase I Rmet_2225 2439716 - 2439108 - | isochorismatase hydrolase TERM 1764 2439263 - 2439229 - G 80 -15.6 -2.91144 | overlap 2439226 GGATCGGGCAAATCA CGCGTGGCGCAGGCAG CGG CCACCAGCGTCACGCG GTAGCCGTGGTCGAG TERM 1765 2439539 - 2439515 - G 75 -14.9 -2.74012 | overlap 2439477 GCACGACGTGAATCA CCGGCGAGCCG TAC CGGCGCGCCAG CGCCAGAAGCTCTCC Rmet_2226 2439802 - 2440662 + | LysR family transcriptional regulator Rmet_2227 2440894 - 2442882 + | diguanylate cyclase Rmet_2228 2444121 - 2442910 - | hypothetical protein TERM 1766 2443899 - 2443909 + g 72 -3.2 -4.67353 | TCACGTCGCCAGGAT CGAC ATC GTTG TTTTTCCATAGATCC TERM 1767 2444272 - 2444241 - R 100 -15.8 -4.38154 | overlap 2444242 2444246 AGATCCGGCACAAAA CGAAACGGCGGCGC AACA GCGCCGCCGCTCCT CCCTACAAGCCGAAC TERM 1768 2444271 - 2444242 - R 91 -19.3 -3.2241 | overlap 2444241 2444246 GATCCGGCACAAAAC GAAACGGCGGCGC AACA GCGCCGCCGCTCC TCCCTACAAGCCGAA TERM 1769 2444267 - 2444246 - R 100 -18.7 -4.26881 | overlap 2444242 2444241 CGGCACAAAACGAAA CGGCGGCGC AACA GCGCCGCCG CTCCTCCCTACAAGC Rmet_2229 2446047 - 2444305 - | extracellular solute-binding protein TERM 1770 2446155 - 2446140 - R 71 -5.4 -4.33274 | gap 1, overlap 2446141 CCCACATCAGCAAAA TCC-GCG TTG CGCCGGA GCACTAGCCCCGGCG Rmet_2230 2446467 - 2446159 - | putative integral membrane protein Rmet_2231 2447309 - 2446479 - | binding-protein-dependent transport systems inner membrane component Rmet_2232 2448186 - 2447302 - | binding-protein-dependent transport systems inner membrane component Rmet_2233 2449283 - 2448183 - | ABC transporter-related protein Rmet_2234 2450409 - 2449285 - | ABC transporter-related protein TERM 1771 2449866 - 2449912 + g 80 -14.4 -3.41527 | overlap 2449867 2449867 TCACGGTGGCATCGC CCTGCGCGAAGAGTTGCGTCAG TTC CTCGCGCAGTTCCTCGCGCAGC TTGTAGTCGAGGTTG TERM 1772 2449867 - 2449899 + g 80 -14.9 -3.14463 | overlap 2449866 2449867 CACGGTGGCATCGCC CTGCGCGAAGAGTTG CGT CAGTTCCTCGCGCAG TTCCTCGCGCAGCTT TERM 1773 2449867 - 2449911 + g 83 -17.9 -2.64595 | overlap 2449867 2449866 CACGGTGGCATCGCC CTGCGCGAAGAGTTGCGTCAG TTC CTCGCGCAGTTCCTCGCGCAG CTTGTAGTCGAGGTT Rmet_2235 2450563 - 2451342 + | DeoR family transcriptional regulator purU 2452390 - 2451524 - | formyltetrahydrofolate deformylase Rmet_2237 2453289 - 2452438 - | NUDIX hydrolase TERM 1774 2454667 - 2454653 - g 71 -12.8 -2.94144 | opp_overlap 2454651, overlap 2454650 GCGTGACCGAAACCA CCGCGC TAG GCGCGG CATATCTCGCCGGGC Rmet_2238 2453323 - 2454855 + | glycerol kinase TERM 1775 2455658 - 2455621 - g 72 -13.3 -3.12327 | opp_overlap 2455621, overlap 2455619 GCGCCAGATGGAAGA CGGCCAGGCCCGGCG GATGGTGG CGCCGAGCCAGGGCG TTCACTTGACGATTC TERM 1776 2455773 - 2455719 - g 81 -11.5 -4.11216 | gap 2, overlap 2455767 TCCTGATTCCGAAAA CCGACGATGGCCGCGTGCTGTTCCTGG TGC CCTGGAACGG-ACAC-ACGATCGTCGG CACCACCGACACCCC Rmet_2239 2454839 - 2456479 + | FAD dependent oxidoreductase Rmet_2240 2456549 - 2456941 + | hypothetical protein TERM 1777 2456959 - 2456992 + T 100 -24.1 -4.51378 | opp_overlap 2456959 2456965, overlap 2456965 AGGCCACGCCACAAA GCAAAACAGGCACCC CGAG GGGTGCCTGTTTTGC TTTTGTCCTATCGCT TERM 1778 2456992 - 2456959 - T 100 -24.1 -3.89524 | opp_overlap 2456959 2456965, overlap 2456965 AGGCCACGCCACAAA GCAAAACAGGCACCC CGAG GGGTGCCTGTTTTGC TTTTGTCCTATCGCT TERM 1779 2456965 - 2456986 + T 100 -15.9 -4.74012 | opp_overlap 2456965 2456959, overlap 2456959 CGCCACAAAGCAAAA CAGGCACCC CGAG GGGTGCCTG TTTTGCTTTTGTCCT TERM 1780 2456986 - 2456965 - T 100 -15.9 -4.61873 | opp_overlap 2456959 2456965, overlap 2456959 CGCCACAAAGCAAAA CAGGCACCC CGAG GGGTGCCTG TTTTGCTTTTGTCCT Rmet_2241 2457275 - 2457051 - | hypothetical protein TERM 1781 2457215 - 2457186 - G 71 -9.3 -3.71672 | gap 1, overlap 2457182 CGGCAGGAAAACGAA CGCCATGCCGGGCT GGA AACCTGG-ATGGCG GCGCAGACTGTCATT Rmet_2242 2457805 - 2457374 - | putative signal peptide protein Rmet_2243 2458134 - 2457931 - | hypothetical protein Rmet_2244 2458309 - 2458959 + | hypothetical protein Rmet_2245 2458956 - 2460236 + | diguanylate cyclase TERM 1782 2460708 - 2460670 - g 79 -14.5 -3.03124 | gap 1, overlap 2460689 GCGGATTCGGCAAGA CCCGCCCCATCGCCG-AC AACG GCACGGCGCTGGGGCGCG CGGAGAACCGCCGCG Rmet_2246 2460246 - 2460749 + | OmpA/MotB TERM 1783 2461984 - 2461996 + G 70 -4.7 -4.36914 | TGCAGTCGGGCTCCT GCGGC GCG GCGGC TTTTCTCGGCCACGC Rmet_2247 2460966 - 2463587 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Rmet_2248 2463878 - 2463603 - | hypothetical protein Rmet_2249 2464796 - 2463948 - | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase Rmet_2250 2465106 - 2467409 + | cellulose synthase regulator protein Rmet_2251 2467411 - 2468574 + | endo-1,4-D-glucanase TERM 1784 2468738 - 2468720 - g 70 -7.3 -3.96216 | overlap 2468721 GTGGGAGGCAAAGAA CCGCGCC GATAT GGCGCGC GGCATCCTGGAAAAG Rmet_2252 2468556 - 2472359 + | cellulose synthase operon C-like protein Rmet_2253 2472388 - 2474136 + | hypothetical protein Rmet_2254 2474140 - 2474340 + | hypothetical protein Rmet_2255 2474337 - 2475092 + | hypothetical protein Rmet_2256 2475089 - 2477662 + | glycosyl transferase family protein Rmet_2257 2477690 - 2479252 + | hypothetical protein Rmet_2258 2479249 - 2479476 + | hypothetical protein TERM 1785 2479806 - 2479826 + G 70 -4.6 -4.34402 | opp_overlap 2479797 2479801, overlap 2479803 AGCAAGGCAAGCCGA TCGGCCTG ATCAA CCGGTCGA TTTTCCTCTCGCAGA Rmet_2259 2479625 - 2480872 + | serine phosphatase Rmet_2260 2480908 - 2481480 + | hypothetical protein Rmet_2261 2481502 - 2481891 + | putative lipoprotein Rmet_2262 2481918 - 2482631 + | diguanylate cyclase Rmet_2263 2482702 - 2482998 + | hypothetical protein Rmet_2264 2483502 - 2484872 + | hypothetical protein Rmet_2265 2485282 - 2485055 - | hypothetical protein Rmet_2266 2485375 - 2485581 + | hypothetical protein Rmet_2267 2487439 - 2485943 - | flagellar hook-associated 2-like protein Rmet_2268 2488994 - 2487744 - | transposase, mutator type TERM 1786 2489299 - 2489324 + r 100 -11.9 -5.45726 | gap 1 TGATCTATTCCCGCG CGCCCACTGCCT CTC AGGT-GTGGGCG TTTTTTTGCCCTATG Rmet_2269 2491424 - 2489373 - | Na+/solute symporter TERM 1787 2490613 - 2490629 + g 75 -3 -4.7173 | gap 1, overlap 2490607 2490613 2490614 ACCTGAATTTCGGCC G-GATCG CGCT CGATCGC TTTTTCCGTCTGGTC TERM 1788 2491475 - 2491440 - R 100 -14.1 -5.12172 | gap 1 CAGCAAGAAAGAAAA TCGTGCCCG-CTCAGC ATGAA ACCGAGGCGGGCACGA TGGGTGTCACGGATG Rmet_2270 2493515 - 2491533 - | acetyl-CoA synthetase TERM 1789 2492527 - 2492548 + g 71 -13.7 -2.65815 | ACGATCTGCGTGGCG CCTGCGGCC AGCG GGCCGTAGG TGATATAGGTGTGGC Rmet_2271 2493812 - 2494738 + | hypothetical protein Rmet_2272 2494832 - 2495386 + | hypothetical protein TERM 1790 2495447 - 2495493 + F 80 -14.5 -3.00298 | opp_overlap 2495447 CATCCCGCCACCAAA CC-TCGTGTCGACGGCTGTATGC AAA GCG-GCAGCCGTCGCCGCGACGG TGTATGATTCCGGGC Rmet_2273 2495497 - 2497062 + | fumarase Rmet_2274 2497239 - 2498051 + | glutamate racemase Rmet_2275 2500356 - 2498041 - | AAA ATPase, central region TERM 1791 2498783 - 2498741 - G 75 -14.8 -2.65815 | TCCAGATTCAGATTA TCCAGGCGGTAGTGCGTCAC CAC GGGACGCACTACCGCTTCGG GCTGCAATCCCATGG TERM 1792 2499785 - 2499799 + g 72 -11.4 -3.50853 | CAGTCGACCATCACC GCGCGA AGA TCGCGC TTGTACTTCGCCAGC TERM 1793 2500666 - 2500676 + G 72 -8.2 -4.17556 | AGAGTGGCGCTCCCC CCGG GAA CCGG TTTCTTCGAGGTATC Rmet_2276 2500536 - 2500778 + | hypothetical protein TERM 1794 2500846 - 2500873 + G 74 -12.8 -3.29704 | gap 1, overlap 2500845 2500842 TTCAAGATCACCATC GCGGTCCTGCTGT TCC AC-GCAGGACTGC TGTATTTGATCCAGA Rmet_2277 2500813 - 2501472 + | TonB-like protein Rmet_2278 2501526 - 2502257 + | MotA/TolQ/ExbB proton channel TERM 1795 2502272 - 2502258 - f 70 -10 -3.53444 | overlap 2502254 GCCGTCAAGAACTAA GTCTGC CCG GCAGAC GCAGGAAGGAAAGCA Rmet_2279 2502290 - 2502703 + | biopolymer transport protein ExbD/TolR TERM 1796 2502731 - 2502756 + F 100 -19.1 -5.1861 | opp_overlap 2502734 ACTGTGTCATCGCAA CAAGGGCACCC CTCG GGGTGCCCTTG TTTTTTAGTGATCGA TERM 1797 2502753 - 2502734 - f 90 -15 -3.65046 | opp_overlap 2502731 GTGTCATCGCAACAA GGGCACCC CTCG GGGTGCCC TTGTTTTTTAGTGAT Rmet_2280 2502912 - 2503238 + | hypothetical protein TERM 1798 2503406 - 2503432 + T 100 -21.6 -4.8622 | overlap 2503405 CCGCCTTTTTATACC GCCCCGCGGACG TTG CGTTCGCGGGGC TTTTTGCTTCGGGCG Rmet_2281 2503856 - 2503449 - | hypothetical protein TERM 1799 2503832 - 2503843 + g 90 -5.8 -5.18357 | TCTTCACGTCATCTG CCGT CAGT ACGG TTTTTTGCTGCATTA TERM 1800 2504081 - 2504051 - R 91 -14.1 -3.87994 | opp_overlap 2504056 2504059, overlap 2504052 2504056 2504059 AGTGACCGCCAGAAA TGAAAGAAGCCCC AGTCA GGGGCTTCTTTCT CGGATGACATCCTGC TERM 1801 2504080 - 2504052 - R 85 -17.6 -2.92475 | opp_overlap 2504056 2504059, overlap 2504051 2504056 2504059 GTGACCGCCAGAAAT GAAAGAAGCCCC AGTCA GGGGCTTCTTTC TCGGATGACATCCTG TERM 1802 2504076 - 2504056 - R 89 -12.6 -4.13995 | opp_overlap 2504056 2504059, overlap 2504052 2504051 2504059 CCGCCAGAAATGAAA GAAGCCCC AGTCA GGGGCTTC TTTCTCGGATGACAT TERM 1803 2504056 - 2504076 + r 86 -12.6 -3.89524 | opp_overlap 2504052 2504051 2504056 2504059, overlap 2504059 CCGCCAGAAATGAAA GAAGCCCC AGTCA GGGGCTTC TTTCTCGGATGACAT TERM 1804 2504073 - 2504059 - R 75 -8.5 -4.18676 | opp_overlap 2504059 2504056, overlap 2504056 2504052 2504051 CCAGAAATGAAAGAA GCCCC AGTCA GGGGC TTCTTTCTCGGATGA TERM 1805 2504059 - 2504073 + r 71 -8.5 -4.07877 | opp_overlap 2504056 2504052 2504051 2504059, overlap 2504056 CCAGAAATGAAAGAA GCCCC AGTCA GGGGC TTCTTTCTCGGATGA Rmet_2282 2504430 - 2504104 - | virulence protein Rmet_2283 2505786 - 2504698 - | hypothetical protein Rmet_2284 2505889 - 2506806 + | LysR family transcriptional regulator Rmet_2285 2508053 - 2506827 - | sodium/hydrogen exchanger TERM 1806 2507239 - 2507199 - G 70 -11 -3.39482 | opp_overlap 2507199 GAACAGCACCGAGAA GGCATCGCGCAGCGGCAG TGATT CCTCTGCCGCGCGATGGC TGAATTCCGATTCGG Rmet_2286 2508719 - 2508258 - | hypothetical protein TERM 1807 2508438 - 2508407 - G 100 -20.3 -4.323 | opp_overlap 2508413, overlap 2508413 GGGAAAGACCGAAAA GCAAAACGGCGCC ACATCG GGCGCCGTTTTGC TTGAGACTGGAGGCG TERM 1808 2508413 - 2508432 + g 95 -12.1 -4.41494 | opp_overlap 2508407 2508413 GACCGAAAAGCAAAA CGGCGCC ACATCG GGCGCCG TTTTGCTTGAGACTG TERM 1809 2508432 - 2508413 - G 100 -12.1 -4.68645 | opp_overlap 2508413, overlap 2508407 GACCGAAAAGCAAAA CGGCGCC ACATCG GGCGCCG TTTTGCTTGAGACTG TERM 1810 2508608 - 2508624 + g 77 -12.3 -3.66178 | opp_overlap 2508608 CCCGAGAAAGAAAAA GGGAAGC GCT GCTTCCC TTTGGGATTGGAGCG TERM 1811 2508624 - 2508608 - G 100 -12.3 -5.38054 | opp_overlap 2508608 CCCGAGAAAGAAAAA GGGAAGC GCT GCTTCCC TTTGGGATTGGAGCG Rmet_2287 2509493 - 2509038 - | hypothetical protein Rmet_2288 2509989 - 2510735 + | hypothetical protein Rmet_2289 2510854 - 2511066 + | phage transcriptional regulator, AlpA Rmet_2290 2511109 - 2511984 + | cobyrinic acid a,c-diamide synthase Rmet_2291 2511968 - 2512237 + | hypothetical protein Rmet_2292 2512230 - 2513909 + | hypothetical protein Rmet_2293 2513924 - 2514484 + | hypothetical protein Rmet_2294 2514488 - 2515726 + | hypothetical protein Rmet_2295 2516156 - 2516947 + | hypothetical protein Rmet_2296 2516944 - 2517471 + | hypothetical protein Rmet_2297 2517545 - 2517985 + | single-strand DNA-binding protein Rmet_2298 2518269 - 2520299 + | DNA topoisomerase III TERM 1812 2520516 - 2520561 + T 100 -24.9 -3.21218 | gap 1 TCCGCCCTCTGCGAA GGGTCTCCCGGTGGCTTG-CCA GGC TGCACGAGCCACCGGGAGACCC TTCGTGGTCAGCGGT TERM 1813 2520749 - 2520778 + T 72 -13.5 -2.64416 | overlap 2520748 GTTCCTCTTTTCTCC CGAGCCGAAGGCC GTTG GGCCTTCGGCGCC ATTCTCCTGCCCATC Rmet_2299 2521658 - 2521023 - | cation efflux protein TERM 1814 2521295 - 2521279 - G 71 -10.8 -3.5882 | opp_overlap 2521282 CACACTAGGTTCAAA GCCGCG TTCAG CGCGGC CATGGCCATCATGGC TERM 1815 2521405 - 2521393 - G 70 -6.2 -4.2704 | overlap 2521401 CCGATTAGCAAGAAA CCCG ACAAG CGGG CCGCGCCCACCTTGA Rmet_2300 2522282 - 2521983 - | hypothetical protein Rmet_2301 2522292 - 2522666 + | hypothetical protein Rmet_2302 2523132 - 2522734 - | MerR family transcriptional regulator TERM 1816 2525553 - 2525582 + G 70 -2.1 -4.62069 | gap 1, opp_overlap 2525544 GCAAGACAGCGATCC TGCTGATGGACGAT GCG ACCGTGC-TCGGCA TTTTTGCAGTGGCCG Rmet_2303 2523182 - 2526136 + | heavy metal translocating P-type ATPase Rmet_2304 2526140 - 2526640 + | signal peptidase II TERM 1817 2526747 - 2526700 - f 73 -10.6 -3.69069 | gap 1, opp_overlap 2526718, overlap 2526701 CCAATCTGAAGAGAA CGGCCCCCAGCATGAGCGGCC GCGGCTT GGCC-CTCATGCTAGCGCCCA CCGCCGCTTTTGCTG TERM 1818 2526870 - 2526882 + F 77 -3.3 -4.87291 | ATGAAAGTCCATCAC GGCGA TGC TGGCC TTTTTCGTTCCAATG Rmet_2305 2526977 - 2527288 + | hypothetical protein TERM 1819 2527311 - 2527339 + F 100 -14.6 -5.055 | TCGCCTCATCCTCCT GACAGCCCCGCA CTTAT TGCGGGGCTTTC TTTTTTCCGCGTTCG TERM 1820 2527570 - 2527605 + G 71 -3.9 -4.56597 | gap 2, overlap 2527591 TTTTCTCAACCGCGT GCGGGAGCTGCCATCCC GTGA GGGACGA-GGC-CCCGC TTTTTCCAAGGAGCC Rmet_2306 2527425 - 2527838 + | hypothetical protein Rmet_2307 2527860 - 2528252 + | hypothetical protein TERM 1821 2528295 - 2528335 + F 100 -17 -4.36914 | gap 1, overlap 2528297 GCGTTCACGGGACCC CATGAGGGACATGCGCCTC GTTC GAGGC-CATGTCCCTCGCG TTTTCTCCCCGCCCA TERM 1822 2528297 - 2528333 + F 85 -18.2 -2.52946 | gap 1, overlap 2528295 GTTCACGGGACCCCA TGAGGGACATGCGCCTC GTTC GAGGC-CATGTCCCTCG CGTTTTCTCCCCGCC Rmet_2308 2528435 - 2529121 + | hypothetical protein TERM 1823 2529109 - 2529126 + F 89 -11.3 -4.27211 | opp_overlap 2529099 2529108 CCAAACGCCAACGAT CAGCGTC ACCT GACGCTG TTTCCTTTCTTTCCA TERM 1824 2529138 - 2529171 + F 80 -11 -3.7791 | gap 1, overlap 2529147 GCTGTTTCCTTTCTT TCCAC-CCACCGGGG TCAAT TCCCGGTGGCGGGGA TTTGCTCCATCATTA TERM 1825 2529667 - 2529687 + G 86 -3.2 -5.1356 | gap 1, overlap 2529669 CTGGCCAACCTGGCT GACCTCGCG ACGC CG-GAGGCC TTTTTGTTCATCGCG Rmet_2309 2529205 - 2529942 + | hypothetical protein TERM 1826 2529979 - 2530021 + F 86 -13.4 -3.53091 | gap 1, opp_overlap 2530007 TTCCTTGTCCTCACC GCATGCCGGCCCGG-TCTC CCGCCA GAGAGCCGGGCCGGCGCAC TTTCACAGGAGCGAT Rmet_2310 2530040 - 2530318 + | hypothetical protein TERM 1827 2530327 - 2530342 + F 100 -10.4 -5.06414 | AGCCTGATTCCTCCA GCCCCT TTCG AGGGGC TTTTTCTTGCCCGCA TERM 1828 2530549 - 2530584 + F 78 -6.9 -4.72272 | gap 2, opp_overlap 2530552 2530556, overlap 2530538 CATCCACGCCACCCA CAAGGGA--CCTCTCCC TTGC GGGCGGGGAATCCCTTG TTTTTCCTCAAGGAG Rmet_2311 2530607 - 2531431 + | hypothetical protein TERM 1829 2531518 - 2531543 + T 76 -9.7 -4.14257 | opp_overlap 2531517, overlap 2531538 CCGCGTGCACTACAG GCCCTTCATCC CATC GGATGGAGGCC TTTCTCATTCTTCCA Rmet_2312 2532100 - 2531693 - | MerR family transcriptional regulator TERM 1830 2532229 - 2532186 - g 74 -13 -3.17392 | gap 1, overlap 2532189 TATGTCGGAACCCAA GAACGGCTGCGGCG-CACTGG CGA CCGGCGGCGTCGCGGCCGTCC TCGCCTCGGCCTGCT TERM 1831 2532226 - 2532189 - g 77 -11.1 -3.73068 | gap 1, overlap 2532186 GTCGGAACCCAAGAA CGGCTGCGGCG-CACTGG CGA CCGGCGGCGTCGCGGCCG TCCTCGCCTCGGCCT Rmet_2313 2532172 - 2532522 + | putative mercuric transport protein Rmet_2314 2532535 - 2532822 + | mercuric transport protein periplasmic protein TERM 1832 2535124 - 2535077 - g 71 -9.1 -3.73775 | CTGATGCTCAGGAAA CTCG-GCAGCTACCCGCGCCAGA ACGG CCTGGC-CGTGGCGCTGCGCGAG CTGGGCCGCATCGAG Rmet_2317 2534516 - 2535535 + | transposase Tn3 Rmet_2318 2535605 - 2535865 + | hypothetical protein TERM 1833 2535881 - 2535904 + F 85 -8.8 -4.63218 | gap 1, overlap 2535883 2535884 CGCGGCAACCGCCTC GCA-GCCCCCG CAT CGGGGGCCTTC TTTTGTTCGCACCGC TERM 1834 2535883 - 2535901 + F 93 -11.6 -4.43307 | overlap 2535881 2535884 CGGCAACCGCCTCGC AGCCCCCG CAT CGGGGGCC TTCTTTTGTTCGCAC TERM 1835 2535884 - 2535900 + F 82 -15.1 -3.25261 | overlap 2535883 2535881 GGCAACCGCCTCGCA GCCCCCG CAT CGGGGGC CTTCTTTTGTTCGCA Rmet_2319 2536173 - 2536457 + | hypothetical protein Rmet_2320 2536675 - 2537673 + | hypothetical protein TERM 1836 2537675 - 2537704 + F 75 -7.7 -4.25283 | overlap 2537676 2537682 CTGCTTCGTTCTGAT CCGGCACGGCCTC TCAC GGGGCCTTGTCGC TTTTCCTCCCCACGT TERM 1837 2537724 - 2537740 + F 73 -13.7 -2.74514 | overlap 2537716 2537715 CCTCCCCACGTACGC CGCGTCC CCA GGACGCG TGCTTGCGCATTTCA TERM 1838 2537767 - 2537790 + F 89 -16 -3.41126 | overlap 2537759 TTCATCCCCCGAGTT CCGCGTGGTC TCAC GGCCACGCGG TTGTCGAATTTCTCA Rmet_2321 2537819 - 2538646 + | hypothetical protein TERM 1839 2538655 - 2538681 + F 73 -9.3 -3.86202 | overlap 2538656 GGCGTGATGCCACGC GGACCTCGCCC ACCTC GGGCGAGGCCA TTTCCTCTCATCCAC TERM 1840 2538656 - 2538680 + F 70 -12.8 -2.914 | overlap 2538655 GCGTGATGCCACGCG GACCTCGCCC ACCTC GGGCGAGGCC ATTTCCTCTCATCCA Rmet_2322 2538741 - 2539430 + | hypothetical protein TERM 1841 2539437 - 2539422 - f 74 -6.8 -4.41494 | overlap 2539423 CAGGCCGAACCAAAA CCTGCG TGAT CGCAGA CGCCGCATGCGCGGT Rmet_2323 2539525 - 2539866 + | hypothetical protein Rmet_2324 2539971 - 2540378 + | hypothetical protein Rmet_2325 2540395 - 2540655 + | hypothetical protein TERM 1842 2540634 - 2540659 + F 76 -6.1 -4.63218 | gap 1 CTTCAACCCGCACAC CCG-GCAGTTCG AGC CGGACTGAGCGG TTTTCTTCCACCCCC TERM 1843 2540667 - 2540701 + F 86 -17.8 -2.76046 | overlap 2540664 2540674 CTGAGCGGTTTTCTT CCACCCCCTGGGGCAG TAC TTGCCCCAGCGGGCGG TGCTGTTCCCGTTCA Rmet_2326 2540732 - 2541379 + | hypothetical protein TERM 1844 2541386 - 2541415 + F 76 -9.9 -3.72576 | overlap 2541388 GCGGCTTGACCCACC CTCGGAGGCACGC CTTG GCGTACTTCCGTG TTTCATCCCCGCCAA TERM 1845 2541388 - 2541413 + F 74 -11.1 -3.44848 | overlap 2541386 GGCTTGACCCACCCT CGGAGGCACGC CTTG GCGTACTTCCG TGTTTCATCCCCGCC Rmet_2327 2541444 - 2542553 + | hypothetical protein Rmet_2328 2542604 - 2542924 + | hypothetical protein Rmet_2329 2543014 - 2543319 + | hypothetical protein TERM 1846 2543395 - 2543435 + F 100 -12.6 -5.27335 | gap 1, overlap 2543396 ATTCTCTTCCCACCA CGGGGCATGCCATTGCCCC GCTG GGGGTGGTG-CATGCCCCA TTTTTCTTTGGAGCA TERM 1847 2543396 - 2543434 + F 95 -16.1 -3.75678 | gap 1, overlap 2543395 TTCTCTTCCCACCAC GGGGCATGCCATTGCCCC GCTG GGGGTGGTG-CATGCCCC ATTTTTCTTTGGAGC TERM 1848 2543817 - 2543778 - g 71 -13.6 -2.73875 | gap 1, overlap 2543775 GCTGCGGCAAGACGA CCGTCGGCATTG-CCACGG CCG CCGTGCTCAACGCCGAAGG CTATCGCCGCACTCT Rmet_2330 2543456 - 2545735 + | helicase-like protein TERM 1849 2545749 - 2545764 + F 100 -11.8 -5.76949 | GACACGTTCCACTTA CGGCCC TTCG GGGCCG TTTTTTTTGCCGCTC Rmet_2331 2545874 - 2546473 + | putative secreted protein Rmet_2332 2546470 - 2547114 + | putative secreted protein Rmet_2333 2547127 - 2547864 + | putative secreted protein Rmet_2334 2547846 - 2548436 + | lytic transglycosylase, catalytic Rmet_2335 2548433 - 2548981 + | putative secreted protein TERM 1850 2549045 - 2549066 + G 78 -10.8 -4.07124 | GGAGCTATACACCGT CGCGGCGT GTGCAG GCGCCGCG TTTCTGTGCCTGGTG Rmet_2336 2548986 - 2551175 + | hypothetical protein Rmet_2337 2551172 - 2551921 + | hypothetical protein Rmet_2338 2554586 - 2551962 - | hypothetical protein TERM 1851 2552390 - 2552414 + g 71 -12.2 -3.25223 | gap 1 GAACATAGTTCTTCG CTGGCGGGTCG CTGT CGACCCGC-AG TTCGTGCTCTCCCTG Rmet_2339 2555321 - 2554596 - | hypothetical protein TERM 1852 2554697 - 2554686 - G 70 -2.2 -4.65933 | gap 1, opp_overlap 2554677 2554687 2554687, overlap 2554687 CAGCTTGAAAAGAAA CGCGG TCG CCG-G CTTGTTTTCGTTGGT TERM 1853 2555086 - 2555074 - G 72 -3.3 -4.67608 | TAGGTGAAGATAAAA GGCGA ATA TTGCC GATCAAACACCACCA Rmet_2340 2556262 - 2555360 - | hypothetical protein Rmet_2341 2556915 - 2556262 - | hypothetical protein TERM 1854 2556601 - 2556626 + g 71 -11.9 -3.19602 | gap 1, overlap 2556600 GCGCAGATCACCGGT CCCGAGCCA-CG TCT TGATGGCTCGGG TATTGCTCTCCCAGC TERM 1855 2557214 - 2557228 + r 75 -2.8 -4.88407 | TGCGAAACGTCCGGC TGACAA CGG TGGTCA TTTTTGCTTCCCTCC Rmet_2342 2558140 - 2557226 - | AAA ATPase, central region Rmet_2343 2558733 - 2558158 - | hypothetical protein TERM 1856 2558686 - 2558669 - G 73 -9.1 -3.82218 | AGCCACATCAGGAAA TCCCGCA GTGG CGCGGGA TATAGAACGCACGCG Rmet_2344 2559200 - 2558730 - | excisionase/Xis, DNA-binding TERM 1857 2559419 - 2559449 + G 71 -11.9 -3.27406 | gap 2, overlap 2559420 ATGGTGGCTTCGATC TGGCTGCGCGCCGCG CAT CGCGGCGTGC--CCA CTTTTCTCGTGACGG TERM 1858 2559420 - 2559450 + G 89 -10.2 -4.46212 | overlap 2559419 TGGTGGCTTCGATCT GGCTGCGCGCCGCG CAT CGCGGCGTGCCCAC TTTTCTCGTGACGGC TERM 1859 2559635 - 2559670 + G 77 -11.9 -3.59979 | gap 2 GACTACCCGCGGCTG CTGGCTGACCTGGCGCG CGTT CGCGCC-GG-CATCCAG TTTCACCTGACGCCA Rmet_2345 2559404 - 2559787 + | hypothetical protein Rmet_2346 2559784 - 2560017 + | hypothetical protein TERM 1860 2560321 - 2560342 + G 71 -12.3 -3.23216 | gap 1, opp_overlap 2560302 GGGCCAATTCGGCCT CACGGTCGCC ATC GGCG-CCGTG TTGCTCGTGATCGGC Rmet_2347 2560034 - 2560393 + | hypothetical protein TERM 1861 2560530 - 2560562 + G 89 -14.8 -3.7948 | gap 1, overlap 2560531 2560550 TCTGCTGCGGCCTGT CCGGCGCCGCCGGCC TGCT GGTCGGCG-CGCCGC TTTCGTGGGTGTTCC TERM 1862 2560531 - 2560561 + G 89 -18.3 -2.87206 | gap 1, overlap 2560530 2560550 CTGCTGCGGCCTGTC CGGCGCCGCCGGCC TGCT GGTCGGCG-CGCCG CTTTCGTGGGTGTTC Rmet_2348 2560406 - 2560804 + | hypothetical protein Rmet_2349 2560801 - 2561493 + | putative secreted protein Rmet_2350 2561490 - 2562401 + | putative secreted protein TERM 1863 2562568 - 2562537 - g 71 -10 -3.56704 | opp_overlap 2562564, overlap 2562533 2562538 2562553 GCCCGAGGAAATGAA GGCGCTGGGCATCG AAGG CGACACCCCGCGCG ACACCGTGGCGACGC Rmet_2351 2562391 - 2563809 + | putative secreted protein Rmet_2352 2563790 - 2564230 + | putative secreted protein TERM 1864 2565147 - 2565159 + G 73 -9.1 -3.90744 | GAGCGGGCGGGATTT CAGCC AGC GGCTG TTCTTTGGGCAGCCG Rmet_2353 2564230 - 2567121 + | hypothetical protein TERM 1865 2567526 - 2567562 + G 76 -9.4 -4.07885 | gap 2 CGCCGAAGCGCGCCT GGCGGAATG-C-GCGGGC GAA GCCGGCAGCCATGCCGCC TTTTGGCAGGCCGTC Rmet_2354 2567146 - 2567910 + | hypothetical protein Rmet_2355 2568086 - 2568580 + | DNA repair protein RadC TERM 1866 2568605 - 2568626 + F 100 -11.5 -4.82901 | overlap 2568606 TGCTTCGTTGATCAG CGCGGAGGC TTCG GCCTCCGCA TTTTTCTGCGCGGCG TERM 1867 2568606 - 2568625 + F 90 -15 -3.49419 | overlap 2568605 GCTTCGTTGATCAGC GCGGAGGC TTCG GCCTCCGC ATTTTTCTGCGCGGC Rmet_2356 2568745 - 2569191 + | hypothetical protein Rmet_2357 2569188 - 2570138 + | hypothetical protein TERM 1868 2571272 - 2571255 - g 84 -8.4 -4.56597 | TCGGTGCTGGAAAAA GCGCTG CTGCTC CAGCGC ACGCTGCTCACGGGC Rmet_2358 2570148 - 2571542 + | hypothetical protein TERM 1869 2571566 - 2571528 - f 76 -15.2 -2.55551 | opp_overlap 2571536 2571540, overlap 2571518 CAGAAGGGCAATCCA GGAGCCAGGCCATGAGCG CGG CGCGCATGACTTGGCGCC CCTTGCGCTGGCTGT Rmet_2359 2571539 - 2571895 + | hypothetical protein Rmet_2360 2571911 - 2573458 + | hypothetical protein Rmet_2361 2573833 - 2573474 - | hypothetical protein Rmet_2362 2574539 - 2573907 - | hypothetical protein Rmet_2363 2575178 - 2574552 - | hypothetical protein Rmet_2364 2575344 - 2577386 + | relaxase Rmet_2365 2578429 - 2577434 - | AraC family transcriptional regulator TERM 1870 2578494 - 2578509 + H 76 -5.4 -4.64657 | overlap 2578470 AGTCCTCTTGGCGGC CTGACG AGAT TGTCAG TTTTTGCAAATTTCA Rmet_2366 2578766 - 2579635 + | enoyl-CoA hydratase Rmet_2367 2580120 - 2579695 - | hypothetical protein Rmet_2368 2580554 - 2580177 - | alkylhydroperoxidase AhpD core Rmet_2369 2581857 - 2580631 - | major facilitator transporter Rmet_2370 2582007 - 2582318 + | ArsR family transcriptional regulator Rmet_2371 2582341 - 2582868 + | rhodanese-like protein TERM 1871 2582919 - 2582932 + F 78 -2.3 -5.10154 | opp_overlap 2582919 GCCGGTCGGCAAGAA CATGC GACG GCAAG TTTTTAATTTTGAGT Rmet_2372 2582975 - 2583934 + | beta-lactamase-like protein Rmet_2373 2583983 - 2585653 + | hypothetical protein Rmet_2374 2585700 - 2586179 + | hypothetical protein Rmet_2375 2586172 - 2587728 + | cytochrome c oxidase, subunit I Rmet_2376 2587785 - 2588366 + | cytochrome C oxidase, mono-heme subunit/FixO Rmet_2377 2588507 - 2589181 + | cytochrome c, class I TERM 1872 2589403 - 2589390 - f 75 -8.1 -4.18762 | AAGGCCTACGCAAAA GACGC CAAG GCGTC TCCGCCCGGTATGCC Rmet_2378 2589414 - 2590262 + | cytochrome c, class I TERM 1873 2590282 - 2590314 + G 74 -2.5 -4.72272 | overlap 2590284 2590287 GGTGGGGATTTCGAC TATGAGCAGGCCCGT GTG GCGGGCCGGATGGTG TTTTTCGTAGACGGG TERM 1874 2591028 - 2591038 + G 72 -6.8 -4.25104 | GGCAGAGCTCGCGCC CGGT GAT ACCG TTTTGATACGCGCCA TERM 1875 2592110 - 2592097 - g 81 -3.1 -5.06414 | gap 1 TCTCCGGAAGAAAAA GCCGAC ATC GT-GGC AAAGAGCCCAGCGCC Rmet_2379 2590243 - 2592501 + | heavy metal translocating P-type ATPase TERM 1876 2592648 - 2592672 + G 75 -12.2 -3.53012 | gap 1, opp_overlap 2592642 CGTTCAAATCCTCGC GCTGGCG-GTG CTGG CACGCGCCAGC TTTGCCGCCGAGCGC TERM 1877 2593444 - 2593418 - g 72 -8.6 -4.12188 | overlap 2593419 2593443 CGATGATTTGGAAAA CCTGGCTCGACG TAG CGGCGAACCAGC GCAGCACGATCGCGA Rmet_2380 2592526 - 2594124 + | apolipoprotein N-acyltransferase Rmet_2381 2594646 - 2594278 - | histidine kinase TERM 1878 2594769 - 2594740 - g 75 -7.7 -4.23781 | overlap 2594735 TGCAGCAAAAGCAAA GCCTCAGCGCCAT AGCC AGGGCCCTGGGGC GTGACAAGAGCACTA Rmet_2382 2594664 - 2595692 + | integrase catalytic subunit Rmet_2383 2596769 - 2595681 - | histidine kinase A-like protein TERM 1879 2596290 - 2596274 - G 74 -11.5 -3.65351 | CGATGCCGATCCAAA GGGCAGC CAG GCCGCCC AGGAAGGCAATCAAG Rmet_2384 2597434 - 2596766 - | two component transcriptional regulator TERM 1880 2597027 - 2596988 - G 83 -15 -3.28712 | gap 1, overlap 2597012 CTCGCGGCGCGACAA GGAGA-CGGGCTCGCCCTG GAA CCAGGCCAGCCCGCTCTCC GGCTCCAGCCGCAGG Rmet_2385 2597603 - 2598226 + | heme exporter protein CcmA TERM 1881 2598831 - 2598855 + G 71 -10.6 -3.62522 | CAACCTCTCTTTGCT CGCCGCCGTG TTCGT CTTGGCGGCG TTCTTCACGCCATTC Rmet_2386 2598223 - 2598909 + | heme exporter protein CcmB Rmet_2387 2598922 - 2599659 + | heme exporter protein CcmC Rmet_2388 2599656 - 2599847 + | hypothetical protein Rmet_2389 2599831 - 2600277 + | CcmE/CycJ protein Rmet_2390 2600281 - 2602242 + | cytochrome c-type biogenesis protein CcmF Rmet_2391 2602239 - 2602763 + | periplasmic protein thiol Rmet_2392 2602760 - 2603215 + | cytochrome C biogenesis protein Rmet_2393 2603212 - 2604093 + | TPR repeat-containing protein TERM 1882 2604245 - 2604266 + G 79 -5.7 -4.68593 | TGTGGTTGTGCGGTC GGCAGTGCG TGGG CGGACGGCC TTTTTCCCTCCTGGG TERM 1883 2604759 - 2604790 + G 100 -8.6 -5.15969 | CAGCGCAGCGCCTAG CAGCATTGGGCCCC GTGT GGGGAACACTGCTG TTTTTTGGCTTCGGC Rmet_2394 2604191 - 2606029 + | cytochrome c biogenesis protein, transmembrane region Rmet_2395 2606029 - 2606865 + | thioredoxin-like protein dsbG 2606868 - 2607641 + | disulfide isomerase/thiol-disulfide oxidase TERM 1884 2607796 - 2607828 + G 79 -14.8 -3.04144 | overlap 2607791 TGGGATTGACTGGCG CCGGCGGCGGCATC TTCGC GGTGCCGGCGCTGG TGTTCGGCCTGGGCA TERM 1885 2607861 - 2607907 + G 86 -15.1 -3.55622 | gap 2 GACATCCGTCAGGCC GCGCCCGTGG-CGCTGCT-CGCC GTG GGAGCAGCGGCGACCCTGGGCGC TTTGCAGGGCTTGCG Rmet_2397 2607732 - 2608538 + | hypothetical protein Rmet_2398 2608581 - 2609957 + | dihydrolipoamide dehydrogenase Rmet_2399 2609989 - 2610312 + | hypothetical protein TERM 1886 2610722 - 2610768 + G 71 -9.9 -3.79519 | gap 1 ATCGAGATACGGCTG TCCGAGGTTCCGCTGGCCGAGC AGTT GCGCGGCCTGCGGT-CCGGGGA TTTCATGATCGGATT TERM 1887 2610913 - 2610889 - g 75 -2.8 -4.82901 | gap 1, overlap 2610891 GCTCGCCCACAAAAA GGTCCCG-CTC CAAG AAGTCGGGATC CATCCACTGGTCTTG Rmet_2400 2610350 - 2611240 + | LysR family transcriptional regulator Rmet_2401 2611555 - 2611262 - | XRE family transcriptional regulator Rmet_2402 2611675 - 2612331 + | LysR family transcriptional regulator Rmet_2403 2613865 - 2612531 - | phage integrase Rmet_2404 2613969 - 2614538 + | hypothetical protein Rmet_2405 2614650 - 2616089 + | integrase catalytic subunit Rmet_2406 2616086 - 2616919 + | ATPase Rmet_2407 2616973 - 2617188 + | hypothetical protein TERM 1888 2617219 - 2617197 - T 91 -19.2 -3.18264 | opp_overlap 2617197 2617200, overlap 2617200 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 1889 2617197 - 2617219 + T 90 -19.2 -3.07816 | opp_overlap 2617197 2617200, overlap 2617200 CTTCTGATCCAGTAA CAAGGGGCCC GCC GGGCCCCTTG TTACATCAGTGCCGC TERM 1890 2617200 - 2617216 + T 90 -15.1 -3.68569 | opp_overlap 2617197 2617200, overlap 2617197 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC TERM 1891 2617216 - 2617200 - T 93 -15.1 -3.73647 | opp_overlap 2617200 2617197, overlap 2617197 CTGATCCAGTAACAA GGGGCCC GCC GGGCCCC TTGTTACATCAGTGC Rmet_2408 2617987 - 2617367 - | phage-related integrase TERM 1892 2617911 - 2617935 + g 70 -2.7 -4.63486 | overlap 2617915 ACCACCAGGCCGAGG CCATCGGTATC GGG GATGCTGTAGG TTTTCTTGGCGGCCT TERM 1893 2618164 - 2618151 - R 100 -9.5 -5.26875 | opp_overlap 2618151 2618148 GCTGGAATGAAAAAA GGGGC CGAA GCCCC TAATTTCAATGACTT Rmet_2409 2619227 - 2618628 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Rmet_2410 2621382 - 2619361 - | excinuclease ABC subunit C TERM 1894 2620750 - 2620726 - G 72 -13.5 -3.14132 | GCGGCCCTGCAGGAA GCGCGCCGCGT TCG ACACGTCGCGC GCGTAGTCGTCCTCG Rmet_2411 2621495 - 2622646 + | hypothetical protein Rmet_2412 2622776 - 2623336 + | elongation factor P TERM 1895 2623356 - 2623385 + T 86 -13.7 -3.54543 | opp_overlap 2623362, overlap 2623362 TCTTAGGGCATACGC AAAAAAGGGCAGC TTCG GCTGCCCTTTTTC TTTCCACGGATCCAT TERM 1896 2623379 - 2623362 - T 100 -12.7 -5.1287 | opp_overlap 2623356 2623362 GGCATACGCAAAAAA GGGCAGC TTCG GCTGCCC TTTTTCTTTCCACGG TERM 1897 2623362 - 2623379 + T 100 -12.7 -5.27335 | opp_overlap 2623362, overlap 2623356 GGCATACGCAAAAAA GGGCAGC TTCG GCTGCCC TTTTTCTTTCCACGG Rmet_2413 2624505 - 2623456 - | beta-hexosaminidase acpS 2624951 - 2624520 - | 4'-phosphopantetheinyl transferase Rmet_2415 2625730 - 2624948 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2626655 - 2625759 - | DNA repair protein RecO TERM 1898 2626243 - 2626229 - G 72 -11.4 -3.53012 | overlap 2626211 GCGCGTCGCCGGAAA GCGGCA GCA TGCCGC CCACGTACTCCGCCT era 2627599 - 2626661 - | GTP-binding protein Era rnc 2628366 - 2627596 - | ribonuclease III TERM 1899 2628075 - 2628045 - G 81 -13.2 -3.63515 | opp_overlap 2628052 GCGCATCGGCAAGAA TCGAGGGGCGGCGG AAA CCGCCGCTCTTCAA CTCGCCTTCACCCAG TERM 1900 2628052 - 2628068 + g 80 -15.1 -3.0634 | opp_overlap 2628045 GGCAAGAATCGAGGG GCGGCGG AAA CCGCCGC TCTTCAACTCGCCTT Rmet_2419 2628763 - 2628371 - | putative transmembrane protein Rmet_2420 2629716 - 2628817 - | signal peptidase I Rmet_2421 2631555 - 2629762 - | GTP-binding protein LepA TERM 1901 2631644 - 2631618 - R 78 -2.8 -5.14563 | opp_overlap 2631635, overlap 2631619 CGCGGGAGCAAAAAA GTTGGGGCGCAC GGA GCTCGCGCCAAT CCGCGATTTTACCGG TERM 1902 2631777 - 2631747 - R 100 -21.3 -3.79747 | opp_overlap 2631747 2631750, overlap 2631750 GCACCCACCACGAAA CAATCGCGCCGGA ACTTG TCCGGCGCGATTG TTTGAAGGCTCGATC TERM 1903 2631747 - 2631777 + r 100 -21.3 -3.55761 | opp_overlap 2631747 2631750, overlap 2631750 GCACCCACCACGAAA CAATCGCGCCGGA ACTTG TCCGGCGCGATTG TTTGAAGGCTCGATC TERM 1904 2631750 - 2631774 + r 100 -17.2 -3.91716 | opp_overlap 2631747 2631750, overlap 2631747 CCCACCACGAAACAA TCGCGCCGGA ACTTG TCCGGCGCGA TTGTTTGAAGGCTCG TERM 1905 2631774 - 2631750 - R 100 -17.2 -4.0274 | opp_overlap 2631750 2631747, overlap 2631747 CCCACCACGAAACAA TCGCGCCGGA ACTTG TCCGGCGCGA TTGTTTGAAGGCTCG Rmet_2422 2633308 - 2631803 - | peptidase S1C, Do Rmet_2423 2634517 - 2633438 - | sigma E regulatory protein, MucB/RseB TERM 1906 2634467 - 2634452 - G 100 -6.8 -5.27923 | opp_overlap 2634452 TAAGGCCAGAAAAAA GGACCT CCGC AGGCCC TTCTTTCCGTGTACG Rmet_2424 2635182 - 2634526 - | anti sigma-E protein RseA Rmet_2425 2635918 - 2635319 - | RNA polymerase sigma factor RpoE TERM 1907 2636123 - 2636150 + r 85 -12.6 -3.72576 | opp_overlap 2636118 2636115, overlap 2636125 GAGTACAGGATGGGA CGGGGGCCGCTG TCAC CAGCCGGCCCCG TTTCATGCGAAACGC TERM 1908 2636125 - 2636149 + r 73 -13.6 -2.83403 | gap 1, opp_overlap 2636118 2636115, overlap 2636123 GTACAGGATGGGACG GGGGCC-GCTG TCAC CAGCCGGCCCC GTTTCATGCGAAACG Rmet_2426 2637406 - 2636174 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1909 2637596 - 2637540 - R 100 -20.4 -3.93262 | overlap 2637551 GTCGAACAGACGAAA GCCACAGAAAACAGCGT-GACAGGACCG TAA CGGCCCCGCCGAC-CTGCCTTCTGTGGC TCGGAATATGAAGAC TERM 1910 2637585 - 2637551 - R 81 -7.9 -4.59081 | overlap 2637540 GAAAGCCACAGAAAA CAGCGT-GACAGGACCG TAA CGGCCCCGCCGAC-CTG CCTTCTGTGGCTCGG acpP 2637857 - 2637618 - | acyl carrier protein Rmet_2428 2638776 - 2638027 - | 3-ketoacyl-(acyl-carrier-protein) reductase Rmet_2429 2639732 - 2638797 - | [Acyl-carrier-protein] S-malonyltransferase Rmet_2430 2640786 - 2639806 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1911 2639974 - 2639989 + g 71 -10.4 -3.63515 | GGCAATCATGCGCTC GCTCGG CAGG CCGAGC TTCTTGGCCGTGCCC Rmet_2431 2641944 - 2640865 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 1912 2641568 - 2641586 + g 79 -10.3 -4.08767 | GTGGCAATAGCCGGG CGCTCGA TACCT TCGAGCG TTTTGAGCACATAGC TERM 1913 2642049 - 2642081 + r 76 -9.2 -4.11216 | opp_overlap 2642056, overlap 2642056 GAGCCGAGCGCCCAA CAAAAAAGCGGCAA CGAGC TTGCCGCTTTCCTG TTTTACACCTGACAA TERM 1914 2642074 - 2642056 - R 100 -10.3 -5.4505 | opp_overlap 2642056 2642049 GCGCCCAACAAAAAA GCGGCAA CGAGC TTGCCGC TTTCCTGTTTTACAC TERM 1915 2642056 - 2642074 + r 80 -10.3 -4.07678 | opp_overlap 2642056, overlap 2642049 GCGCCCAACAAAAAA GCGGCAA CGAGC TTGCCGC TTTCCTGTTTTACAC rpmF 2642316 - 2642137 - | 50S ribosomal protein L32 TERM 1916 2642455 - 2642485 + r 76 -6 -4.71828 | gap 1, overlap 2642457 2642458 2642470 ATGCTTCGTCTTCAG GCTGGCCAGCGCC GCGAAG GGCGACGGCC-GC TTTTCTTCCTCAGGT Rmet_2433 2643054 - 2642437 - | hypothetical protein Rmet_2434 2643221 - 2643820 + | Maf-like protein Rmet_2435 2643824 - 2644555 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 1917 2644592 - 2644564 - T 100 -19 -5.1244 | opp_overlap 2644569, overlap 2644569 GCAGTAAGACAAAAA CAAAAGCCCCCG GAAAT CGGGGGCTTTTG CATGGGCGCATCGCG TERM 1918 2644587 - 2644569 - T 100 -13.1 -5.40873 | opp_overlap 2644569, overlap 2644564 AAGACAAAAACAAAA GCCCCCG GAAAT CGGGGGC TTTTGCATGGGCGCA TERM 1919 2644569 - 2644587 + T 100 -13.8 -4.18018 | opp_overlap 2644564 2644569 AAGACAAAAACAAAA GCCCCCGG AAA TCGGGGGC TTTTGCATGGGCGCA Rmet_2436 2645775 - 2644612 - | peptidase S49 Rmet_2437 2646200 - 2645817 - | Rieske (2Fe-2S) region TERM 1920 2646018 - 2646003 - G 79 -6.1 -4.68593 | opp_overlap 2646003 CGCACTATCGAAAAA CTGGC CTTCCT GCCAG TCCAGTTCCATCGGC Rmet_2438 2646852 - 2646193 - | HAD family hydrolase Rmet_2439 2647927 - 2646911 - | ribosomal large subunit pseudouridine synthase C TERM 1921 2647366 - 2647346 - G 72 -11.1 -3.53012 | opp_overlap 2647340 2647339, overlap 2647347 GCGCGTGTTCGGAAA CTCGCCCGC CAC GCAGGCGAA ATACCGCTTGTCCAT TERM 1922 2648343 - 2648301 - H 71 -6.3 -4.42386 | gap 1, overlap 2648304 2648306 2648309 TGTTCAGGTAGAAAA GAATTCAATGTGGATGCCCG CCAT CGGGCATCCACATCGG-TGA GAGAAGACCGCCCGC TERM 1923 2648341 - 2648304 - H 100 -14.9 -4.33182 | overlap 2648301 2648306 2648309 TCAGGTAGAAAAGAA TTCAATGTGGATGCCCG CCAT CGGGCATCCACATCGGT GAGAGAAGACCGCCC TERM 1924 2648339 - 2648306 - H 100 -21.9 -2.50789 | overlap 2648304 2648301 2648309 AGGTAGAAAAGAATT CAATGTGGATGCCCG CCAT CGGGCATCCACATCG GTGAGAGAAGACCGC TERM 1925 2648336 - 2648309 - H 100 -20 -3.39162 | overlap 2648306 2648304 2648301 TAGAAAAGAATTCAA TGTGGATGCCCG CCAT CGGGCATCCACA TCGGTGAGAGAAGAC TERM 1926 2648616 - 2648597 - H 80 -10 -4.07246 | gap 1 CGAGGGGAAACGAAA GCCTGTGCC GCC GGCAC-GGC GTACACGTCCCCCCG TERM 1927 2648755 - 2648772 + H 79 -8.3 -4.57073 | overlap 2648762 2648763 GCTTCTCCTTTCACC CGCGCCC AGCC GGCCGCG TTTTTGCGCGCGCTG TERM 1928 2650492 - 2650473 - g 70 -4.9 -4.39877 | opp_overlap 2650484, overlap 2650475 2650490 GCAAGAAGGAAGAAA CGCGTCC GCGTCA GGAAGCG GCCGTCAAGGGCATC Rmet_2440 2648903 - 2652016 + | RNAse E TERM 1929 2652076 - 2652054 - f 100 -17 -3.66178 | opp_overlap 2652054 GCCGGCAAGGGGAAA GGGGACGGCC AGA AGCCGTCCCC TTTTTTTGTTTGCGG TERM 1930 2652054 - 2652076 + F 100 -16.3 -5.95539 | opp_overlap 2652054 GCCGGCAAGGGGAAA GGGGACGGC CAGAA GCCGTCCCC TTTTTTTGTTTGCGG TERM 1931 2652243 - 2652213 - g 70 -7.5 -4.03978 | gap 1, overlap 2652214 AATGGCTGACAGAAA GGCCTCCCTGGCGC CCGC GCGCCGAAGA-GCC TCCGTCCTCACCCTG moaA 2652199 - 2653386 + | molybdenum cofactor biosynthesis protein A TERM 1932 2653464 - 2653446 - g 72 -11.6 -3.54951 | CACGCGACGACATAA CCGGCCTG ATC CTGGCCGG CGGCCGAGGCAGCCG mobA 2653424 - 2654035 + | molybdopterin-guanine dinucleotide biosynthesis protein A Rmet_2443 2654130 - 2655416 + | molybdopterin molybdochelatase TERM 1933 2655441 - 2655452 + F 81 -5.8 -4.84017 | overlap 2655437 TACGGCAACGTCCTG CGAC GGGT GTCG TTTTTGTGCCGCATT Rmet_2444 2655596 - 2655877 + | hypothetical protein Rmet_2445 2657377 - 2656031 - | hypothetical protein Rmet_2446 2658401 - 2657397 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_2447 2659828 - 2658398 - | putative transmembrane protein TERM 1934 2659327 - 2659316 - G 76 -2.2 -4.89233 | overlap 2659318 GAGGAAGATGAAAAA CACG ACGA CATG CGCCACATGCCTGCG Rmet_2448 2660613 - 2659927 - | hypothetical protein Rmet_2449 2661888 - 2660689 - | nicotinate phosphoribosyltransferase Rmet_2450 2662485 - 2661955 - | hypothetical protein Rmet_2451 2662904 - 2663227 + | 4Fe-4S ferredoxin, iron-sulfur binding Rmet_2452 2663304 - 2664407 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1935 2664450 - 2664422 - f 80 -11.2 -3.76393 | gap 1, opp_overlap 2664422 2664430, overlap 2664429 2664430 AGATCGGAACCGAAA CAAAAAAGCCGCC TCCG GGCGG-TTTTTTG TTTGCATAAATCGAA TERM 1936 2664422 - 2664450 + F 77 -11.2 -3.6682 | gap 1, opp_overlap 2664422 2664429 2664430, overlap 2664430 AGATCGGAACCGAAA CAAAAAAGCCGCC TCCG GGCGG-TTTTTTG TTTGCATAAATCGAA TERM 1937 2664444 - 2664429 - f 95 -6 -5.67283 | opp_overlap 2664422 2664430, overlap 2664422 2664430 AACCGAAACAAAAAA GCCGCC TCCG GGCGGT TTTTTGTTTGCATAA TERM 1938 2664443 - 2664430 - f 73 -9.5 -3.9793 | opp_overlap 2664422 2664430, overlap 2664429 2664422 ACCGAAACAAAAAAG CCGCC TCCG GGCGG TTTTTTGTTTGCATA TERM 1939 2664430 - 2664443 + F 100 -9.5 -5.65927 | opp_overlap 2664430 2664429 2664422, overlap 2664422 ACCGAAACAAAAAAG CCGCC TCCG GGCGG TTTTTTGTTTGCATA TERM 1940 2664765 - 2664732 - f 86 -13.9 -3.55368 | opp_overlap 2664732 2664738, overlap 2664738 AGCCAACCGATAGAA GAGGAAGGCCGATGC GAAA GCATCGGCCTTTTTC TTTTTGCGCGTCCGA TERM 1941 2664732 - 2664765 + F 100 -18.3 -4.59773 | opp_overlap 2664732 2664738, overlap 2664738 AGCCAACCGATAGAA GAGGAAGGCCGATGC GAAA GCATCGGCCTTTTTC TTTTTGCGCGTCCGA TERM 1942 2664738 - 2664759 + F 100 -15.9 -5.61881 | opp_overlap 2664738 2664732, overlap 2664732 CCGATAGAAGAGGAA GGCCGATGC GAAA GCATCGGCC TTTTTCTTTTTGCGC TERM 1943 2664759 - 2664738 - f 93 -15.9 -3.44443 | opp_overlap 2664732 2664738, overlap 2664732 CCGATAGAAGAGGAA GGCCGATGC GAAA GCATCGGCC TTTTTCTTTTTGCGC Rmet_2453 2664867 - 2665706 + | AraC family transcriptional regulator Rmet_2454 2665731 - 2666339 + | lysine exporter protein LysE/YggA rpsU 2666690 - 2666902 + | 30S ribosomal protein S21 TERM 1944 2666941 - 2666924 - T 100 -12.7 -5.07486 | opp_overlap 2666924 CATTGCCAAGAAAAA CCGCCAG CAAG CTGGCGG TTTTTTTTCGTCCCT TERM 1945 2666924 - 2666941 + T 100 -12.7 -5.86965 | opp_overlap 2666924 CATTGCCAAGAAAAA CCGCCAG CAAG CTGGCGG TTTTTTTTCGTCCCT Rmet_2456 2667584 - 2666967 - | lysine exporter protein LysE/YggA Rmet_2457 2667751 - 2668662 + | lipooligosaccharide transporter ATP-binding subunit Rmet_2458 2668664 - 2669521 + | ABC transporter Rmet_2459 2670775 - 2669567 - | O-succinylhomoserine sulfhydrylase Rmet_2460 2672344 - 2670812 - | amidophosphoribosyltransferase Rmet_2461 2672957 - 2672460 - | colicin V production protein Rmet_2462 2673910 - 2673173 - | sporulation related TERM 1946 2673276 - 2673294 + g 74 -10.2 -3.68836 | overlap 2673274 GCCCGCAGCAGGTTC CGCTCGCC ATC GGCCAGCG TCTTCTTTTCCACAT Rmet_2463 2675262 - 2673952 - | FolC bifunctional protein TERM 1947 2675289 - 2675315 + r 90 -15.2 -3.41795 | opp_overlap 2675289 ACTACAAAAGCAAAA TGGCGCGGGT ATTCGGC ACCCGCGCCA TTGTCCTGCAAATTT TERM 1948 2675315 - 2675289 - R 100 -15.9 -4.74012 | opp_overlap 2675289 ACTACAAAAGCAAAA TGGCGCGGGTA TTCGG CACCCGCGCCA TTGTCCTGCAAATTT Rmet_2464 2676213 - 2675341 - | acetyl-CoA carboxylase subunit beta TERM 1949 2676334 - 2676371 + r 77 -7.8 -4.37886 | opp_overlap 2676335, overlap 2676335 TCGGACCGAAGCAAA ACGCGCCATTTGTG CAGCAAGAAT CATAAATGGCGCGA TTTTCTCAGCGGTAC TERM 1950 2676370 - 2676335 - R 84 -9.1 -4.43477 | opp_overlap 2676335 2676334 CGGACCGAAGCAAAA CGCGCCATTTGTG CAGCAAGAAT CATAAATGGCGCG ATTTTCTCAGCGGTA trpA 2677204 - 2676407 - | tryptophan synthase subunit alpha Rmet_2466 2678151 - 2677216 - | DNA methylase N-4/N-6 Rmet_2467 2679374 - 2678151 - | tryptophan synthase subunit beta TERM 1951 2679386 - 2679362 - G 82 -15.7 -3.14564 | CCAGGCTCTCAGGAA GCGCGTCAGCC ATG GGATGACGCGC GGGGTATCGGGGTCG Rmet_2468 2680129 - 2679434 - | N-(5'-phosphoribosyl)anthranilate isomerase truA 2680955 - 2680119 - | tRNA pseudouridine synthase A TERM 1952 2680555 - 2680503 - G 81 -16.2 -2.94099 | gap 1, overlap 2680484 2680483 TTCGCCGAGCAGACA TGCCGACGCCCGGCGCATCGCCTCG GTAT CGAGCCGCTGC-CCGTGCGGCAGCA TCAGGTAACCGGCAC TERM 1953 2680987 - 2681013 + r 85 -18.1 -2.55074 | opp_overlap 2680987 GGCACAAAAACAAAA TGCGCCGGAAG GGACG CTTCCGGCGCA TCGCTTCGGGTTGCG TERM 1954 2681013 - 2680987 - R 100 -18.1 -5.35224 | opp_overlap 2680987 GGCACAAAAACAAAA TGCGCCGGAAG GGACG CTTCCGGCGCA TCGCTTCGGGTTGCG Rmet_2470 2683924 - 2681102 - | peptidoglycan-binding LysM TERM 1955 2683364 - 2683422 + g 80 -15.1 -3.05816 | overlap 2683366 CTCGGGGGCGGCTGC CACCGGTGCCGGCGCGGGCGCCGAC CGGGCTGGA GCTGGCGCTGGAGCCGGAGCCGGTG TTGCATCGGGCGTGG TERM 1956 2684165 - 2684140 - R 95 -20.5 -3.06183 | overlap 2684143 GCCACCCGGATGCAA CAACGCCGCGC TGTG GCGCGGCGTTG CAGGCAAAGCAGCAG TERM 1957 2684162 - 2684143 - R 93 -16.4 -3.67775 | overlap 2684140 ACCCGGATGCAACAA CGCCGCGC TGTG GCGCGGCG TTGCAGGCAAAGCAG Rmet_2471 2685362 - 2684226 - | aspartate-semialdehyde dehydrogenase TERM 1958 2685448 - 2685462 + r 74 -6.4 -4.33708 | opp_overlap 2685448 GGCAGGCACGACGAA CGATCT AGG GGATCG TTTTGGTAATAGTTT Rmet_2472 2686871 - 2685804 - | 3-isopropylmalate dehydrogenase TERM 1959 2686751 - 2686771 + g 71 -9.6 -3.71645 | overlap 2686737 CTTCGGCCTCGTAGC CAGCGCCG CCGAC CGGCGCGG TTTCCATCTCGAATT leuD 2687549 - 2686899 - | isopropylmalate isomerase small subunit TERM 1960 2687483 - 2687496 + g 71 -8.1 -4.11216 | GCTTCGGAATGATCG CGTCG GTAT CGACG TTTTCACGATCGAGC Rmet_2474 2687693 - 2687559 - | entericidin EcnAB Rmet_2475 2689129 - 2687720 - | isopropylmalate isomerase large subunit TERM 1961 2688155 - 2688197 + g 76 -6.1 -4.48987 | overlap 2688158 CGGCTGCAGGCCCAT GTACTCGAGCGCGCGCTCC ATCGC GTTGCGCTTGTTCGAGTCC TTTTCCTTCTCCGGA Rmet_2476 2690145 - 2689444 - | ABC transporter-related protein livG 2690912 - 2690145 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 2692183 - 2690909 - | leucine/isoleucine/valine transporter permease subunit Rmet_2479 2693122 - 2692196 - | inner-membrane translocator TERM 1962 2693239 - 2693210 - R 100 -21.5 -4.36931 | gap 1 GAACCGATACCAAAA CGCCCCGCTCACCG GGT CGG-GAGCGGGGCG TCTCGCCAGAATGGC Rmet_2480 2694390 - 2693263 - | extracellular ligand-binding receptor TERM 1963 2694183 - 2694205 + g 77 -13.4 -3.38207 | CGGCTTCGAACTTGT TGCCGTTGGC GCC GCCGGCGGCA TTGATCTGTTCGATG TERM 1964 2695027 - 2695008 - R 100 -16.4 -5.87688 | opp_overlap 2695008 ACAAGGCAAAAAAAA CGCCCCGG CGGA CCGGGGCG TTCTTCAGCTTGCGT TERM 1965 2695008 - 2695027 + r 93 -16.4 -3.6849 | opp_overlap 2695008 ACAAGGCAAAAAAAA CGCCCCGG CGGA CCGGGGCG TTCTTCAGCTTGCGT gltA 2696357 - 2695056 - | type II citrate synthase Rmet_2482 2696726 - 2696400 - | hypothetical protein TERM 1966 2696700 - 2696741 + g 70 -13.8 -2.61274 | gap 2, overlap 2696699 CAGCCTTCTTGCGAC CGGCGCGCCA-CCCGAT-TG ATAC CGCATCGGGCTGACGCGCCG CTTACTTCAACTACA sdhB 2697517 - 2696816 - | succinate dehydrogenase iron-sulfur subunit sdhA 2699330 - 2697552 - | succinate dehydrogenase flavoprotein subunit TERM 1967 2697999 - 2698029 + g 80 -12.4 -3.78235 | GGCCAGACGGGCCAT GGCGCGGTCGGCGG CAT CTGCCGGCAGCGGC TTGTGTTCCTTCTGC Rmet_2485 2699699 - 2699334 - | succinate dehydrogenase subunit D Rmet_2486 2700121 - 2699711 - | succinate dehydrogenase subunit C Rmet_2487 2700488 - 2700114 - | hypothetical protein Rmet_2488 2701349 - 2700495 - | GntR family transcriptional regulator TERM 1968 2701207 - 2701251 + g 72 -13.4 -3.14564 | gap 1, opp_overlap 2701205 2701204, overlap 2701237 AGTGGGCTGAAAGTC GGCGACG-GCGCGGCCGTCGC GGGG GCGACTGCAGCGCCCGGCGCG TTCGTGGACGGCTGC TERM 1969 2701237 - 2701279 + g 72 -11.1 -3.53012 | gap 1, opp_overlap 2701204, overlap 2701207 GTCGCGGGGGCGACT GCAGCGCCCGG-CGCGTTCG TGGA CGGCTGCGTCCCGGCGCCGC TTTGGGGGGCGCCCG Rmet_2489 2701741 - 2702724 + | malate dehydrogenase TERM 1970 2702749 - 2702803 + F 100 -21 -4.08767 | gap 1, opp_overlap 2702740 2702753 2702755, overlap 2702755 AGCCAACCCGCTCAT GAAAGACCGGGGTTCCGCATCGATT CTCGAA AATCGGCGCGGA-CCCCGGTTTTTC TTTTGGGCGCGTAAA TERM 1971 2702799 - 2702753 - f 93 -14.5 -3.73072 | gap 1, opp_overlap 2702749 2702755, overlap 2702740 2702755 AACCCGCTCATGAAA GACCGGGGTTCCGCATCGATTC TCGA AAATCGGCGCGG-ACCCCGGTT TTTCTTTTGGGCGCG TERM 1972 2702797 - 2702755 - f 100 -17.1 -3.44848 | gap 1, opp_overlap 2702755 2702749, overlap 2702740 2702753 CCCGCTCATGAAAGA CCGGGGTTCCGCATCGATTC TCGA AAATCGGCGCGG-ACCCCGG TTTTTCTTTTGGGCG TERM 1973 2702755 - 2702797 + F 100 -16.4 -5.45802 | gap 1, opp_overlap 2702740 2702753 2702755, overlap 2702749 CCCGCTCATGAAAGA CCGGGGTTCCGCATCGATT CTCGAA AATCGGCGCGGA-CCCCGG TTTTTCTTTTGGGCG TERM 1974 2703108 - 2703083 - g 81 -11.1 -4.11371 | CAACAGCGCCGAAAA TGCGCACAACC GTGT GGGCGTGCGCA TCCACGATCCGGCGC TERM 1975 2703700 - 2703664 - g 80 -12.4 -3.70902 | CCGGGGACAGCGAAA TCG-GCGCAGCAAGCCAG ATC CTG-CTTGCGGCGCACGA GAACAACTGGGCGCC Rmet_2490 2702859 - 2703839 + | HpcH/HpaI aldolase Rmet_2491 2704065 - 2704616 + | putative signal peptide protein acnA 2704805 - 2707510 + | aconitate hydratase TERM 1976 2707527 - 2707568 + F 100 -22.5 -5.26119 | gap 1, opp_overlap 2707532, overlap 2707532 TCGCCAGCTGCTGAC CGAAACCGCCGTCCCGGCTT GCA AAGC-GGGGCGGCGGTTTTG TTTTGTTTTTGCGGG TERM 1977 2707532 - 2707563 + F 100 -18.8 -5.43329 | gap 1, opp_overlap 2707532, overlap 2707527 AGCTGCTGACCGAAA CCGCCGTCCCGGCTT GCA AAGC-GGGGCGGCGG TTTTGTTTTGTTTTT TERM 1978 2707563 - 2707532 - f 100 -16.6 -3.64822 | gap 1, opp_overlap 2707532 2707527 AGCTGCTGACCGAAA CCGCCGTCCCGGCTT GCA AAGCGGGG-CGGCGG TTTTGTTTTGTTTTT Rmet_2493 2707687 - 2707821 + | hypothetical protein Rmet_2494 2707926 - 2709128 + | hypothetical protein TERM 1979 2709176 - 2709145 - T 100 -20.4 -4.11216 | opp_overlap 2709145 2709152, overlap 2709152 CGCGCAGTCCGAAAA TGAAAAACCCGCCA GATC TGGCGGGTTTTTCA TTTCATCCGACGCTC TERM 1980 2709145 - 2709176 + T 100 -20.4 -3.72893 | opp_overlap 2709145 2709152, overlap 2709152 CGCGCAGTCCGAAAA TGAAAAACCCGCCA GATC TGGCGGGTTTTTCA TTTCATCCGACGCTC TERM 1981 2709169 - 2709152 - T 100 -12.7 -5.0925 | opp_overlap 2709145 2709152, overlap 2709145 TCCGAAAATGAAAAA CCCGCCA GATC TGGCGGG TTTTTCATTTCATCC TERM 1982 2709152 - 2709169 + T 100 -12.7 -5.01811 | opp_overlap 2709152 2709145, overlap 2709145 TCCGAAAATGAAAAA CCCGCCA GATC TGGCGGG TTTTTCATTTCATCC Rmet_2495 2709911 - 2709201 - | putative methyltransferase TERM 1983 2709984 - 2710008 + G 85 -12.2 -4.07568 | gap 1 GCATCCCTTTCGATT GCGTTGAGCGC CACC GCGCTC-ACGC TTTTGCCCGCCCAGG TERM 1984 2711427 - 2711384 - g 70 -11 -3.40403 | gap 1, overlap 2711369 2711370 GGCCCGCGAGGAGAA TGCCCGCGCGG-CGGCCAA GTTCGCG CTGGCCGACCACGCGATCA TCCCGTCGCACAGCC Rmet_2496 2709915 - 2711531 + | extracellular solute-binding protein Rmet_2497 2712517 - 2711585 - | hypothetical protein TERM 1985 2712332 - 2712371 + g 70 -11.3 -3.31144 | opp_overlap 2712329, overlap 2712333 CATTTCCGAGAACGT CACCGGCGCGAAGCGCG GCGTCA TGCGCTTCTCGCCGGCA TTGTCGACATCGCCG TERM 1986 2712333 - 2712370 + g 74 -14.8 -2.58544 | opp_overlap 2712329, overlap 2712332 ATTTCCGAGAACGTC ACCGGCGCGAAGCGCG GCGTCA TGCGCTTCTCGCCGGC ATTGTCGACATCGCC Rmet_2498 2713275 - 2712514 - | tetratricopeptide TPR_4 Rmet_2499 2713431 - 2713913 + | hypothetical protein TERM 1987 2713993 - 2713958 - f 100 -14.1 -4.56597 | gap 1 GCTTCCGGTCAAAAA TTGTCGCCTGGCTGGG TATCG CCCGG-CAGGCGACAA CTGCCCTCCACTCAG Rmet_2500 2714071 - 2714427 + | ArsR family transcriptional regulator Rmet_2501 2714424 - 2715506 + | glutathione S-transferase-like protein TERM 1988 2715515 - 2715565 + T 76 -9.8 -3.79113 | gap 3, opp_overlap 2715512, overlap 2715516 2715520 2715521 CGGCTAACCAGAGCC CCGAC-AGC-GGG-CAGCGGGAGGC GCCG GCCTCCCGCTACCCCCGTTCGTCAG TTGTTCTCAGGCCGT TERM 1989 2715516 - 2715561 + T 88 -18.9 -2.68806 | opp_overlap 2715512, overlap 2715515 2715520 2715521 GGCTAACCAGAGCCC CGACAGCGGGCAGCGGGAGGC GCCG GCCTCCCGCTACCCCCGTTCG TCAGTTGTTCTCAGG TERM 1990 2715520 - 2715557 + T 89 -16.9 -3.2557 | opp_overlap 2715512, overlap 2715516 2715515 2715521 AACCAGAGCCCCGAC AGCGGGCAGCGGGAGGC GCCG GCCTCCCGCTACCCCCG TTCGTCAGTTGTTCT TERM 1991 2715521 - 2715556 + T 95 -20.4 -2.54619 | opp_overlap 2715512, overlap 2715520 2715516 2715515 ACCAGAGCCCCGACA GCGGGCAGCGGGAGGC GCCG GCCTCCCGCTACCCCC GTTCGTCAGTTGTTC Rmet_2502 2716914 - 2715562 - | cytochrome c, class I TERM 1992 2715919 - 2715943 + g 70 -11.3 -3.35996 | opp_overlap 2715909 AGTCAGCGCGCCGTT GCTGCGATCCG TTC CGGCACGCAGC TTGTCCGTCGCACTG Rmet_2503 2718700 - 2716925 - | glucose-methanol-choline oxidoreductase Rmet_2504 2719524 - 2718703 - | hypothetical protein TERM 1993 2719543 - 2719518 - G 91 -11.2 -4.51743 | opp_overlap 2719516 2719513 2719509 GCACCATTAAAGAAA CGGTCATGCC TGGGCG AGCATGACCG AATCATTGACTTATC TERM 1994 2719761 - 2719783 + r 76 -6.2 -4.59773 | opp_overlap 2719734 CAGTCGAGCCAGTCG CGCAGGCTCT CCC AGGCCTTGCG TTTTTCCGCATAGGC Rmet_2505 2720239 - 2719745 - | uracil-DNA glycosylase superfamily protein Rmet_2506 2722266 - 2720365 - | heat shock protein 90 TERM 1995 2722352 - 2722362 + r 70 -4.6 -4.56597 | GTGTGGAAATAGGGA TCGG CAG CCGG TTTTTCAAGCCCCGG Rmet_2507 2723914 - 2722367 - | GntR family transcriptional regulator TERM 1996 2723418 - 2723476 + g 70 -14.3 -2.63382 | opp_overlap 2723431 2723462 CCCAGGCTGCGCAGC GCACCCGACAGGAGCTCCCCGTCCAGC CATTC GTTGGGCAGGAAGCCCCAGCCGGGCGC CTTGTGGCTCTCGGC TERM 1997 2724640 - 2724611 - g 84 -12.7 -3.7104 | opp_overlap 2724611 ATCGAGATCGAACAA GGCGACGGCCCGC CTCT GCTGGCCGCCGAC ATCGAAACCCCAGCG Rmet_2508 2723999 - 2724676 + | hypothetical protein Rmet_2509 2724704 - 2725420 + | Ala-tRNA(Pro) hydrolase TERM 1998 2725892 - 2725922 + G 90 -15.4 -3.62597 | overlap 2725872 GGGGCAGCGCGTGGT GCTGGTCAGCGCGA TAT TCGCGCTGTTCGGC TTCTTCAGCAATGGC Rmet_2510 2725443 - 2726072 + | lysine exporter protein LysE/YggA Rmet_2511 2726069 - 2727052 + | hypothetical protein Rmet_2512 2727065 - 2727517 + | endoribonuclease L-PSP TERM 1999 2728632 - 2728687 + G 100 -19.9 -3.17714 | gap 3, opp_overlap 2728672, overlap 2728608 GCAACGTGGCCTACG TGCCAGGCGC-GC-CGTTCT-ACGCGGG CAG CCCGCGCAAGAACACGCTGCGCCTGGCA TTCGTGACCGTTTCG Rmet_2513 2727578 - 2728792 + | aminotransferase, class I and II Rmet_2514 2728830 - 2729474 + | glutathione S-transferase-like protein TERM 2000 2729883 - 2729909 + F 76 -15.2 -2.52464 | overlap 2729888 ACGCCGGACTCATTT TGATAGCGCCTC CCA GGGGCGCTATCG TCGCTTGAACGGGCA Rmet_2515 2729992 - 2731668 + | L-lactate transport TERM 2001 2731700 - 2731719 + F 100 -12.1 -4.72986 | CGCTGCAGTCTTCAA GCCCCGC CCTCGA GCGGGGC TTTTTCATGGGCGTA Rmet_2516 2731778 - 2733610 + | ABC transporter-related protein Rmet_2517 2734149 - 2733619 - | chromate transporter Rmet_2518 2734727 - 2734146 - | chromate transporter TERM 2002 2735045 - 2735011 - R 75 -13.5 -2.9062 | opp_overlap 2735011, overlap 2735008 2735013 CGGATCAGAGAATCA GAGGACCAGCGCCGG AATCA CCGACGCCGTTCCCC TTTACTCCCCAACCT TERM 2003 2735043 - 2735013 - R 72 -12.5 -3.00164 | opp_overlap 2735011, overlap 2735011 2735008 GATCAGAGAATCAGA GGACCAGCGCCGG AATCA CCGACGCCGTTCC CCTTTACTCCCCAAC Rmet_2519 2737377 - 2735047 - | DNA topoisomerase IV subunit A Rmet_2520 2738374 - 2737532 - | lytic transglycosylase, catalytic Rmet_2521 2740459 - 2738387 - | DNA topoisomerase IV subunit B TERM 2004 2740258 - 2740280 + g 70 -11.3 -3.35996 | ACGCGTTGTCGATCA CCTCCTGCA CGACA TGCAGGGGG TTATCGGTACGGGTG TERM 2005 2741168 - 2741154 - g 86 -10 -4.27316 | TGCGGGAACCGAAAA TGGTCG CGA CGACCA CCGGCCATCACCAGA Rmet_2522 2740583 - 2741794 + | major facilitator transporter Rmet_2523 2743916 - 2741991 - | ABC transporter-related protein TERM 2006 2743057 - 2743088 + g 71 -14.4 -2.71263 | gap 1 CGCATCGTCACCAGC CGCTGCACCCGC-GC CAC GCTGCGGGTACGGCG TGCTTCCACGCCCTT TERM 2007 2743461 - 2743448 - G 73 -9.5 -3.88787 | opp_overlap 2743455, overlap 2743449 GCAGACCGCCAGAAA GCGCG TCCA CGCGC ACATGCGGGTCGAGC TERM 2008 2744045 - 2744033 - R 90 -6.2 -5.27335 | GCCTGGAAACAAAAA GGGC CAACT GCCC ACCGTCAACCGCTTT Rmet_2524 2746915 - 2744171 - | ATP-dependent transcription regulator LuxR TERM 2009 2746855 - 2746884 + g 81 -15.8 -3.02144 | opp_overlap 2746840 GACGTTGGCGGATCG TCGTGCCGCTAC CCAGAC GTGGCGGCACGA TCTTCGGCAAGATGC TERM 2010 2746986 - 2747024 + r 72 -13.8 -2.61274 | gap 1, opp_overlap 2746987, overlap 2746985 GCCCCGGGACGCCAA AGCTGCTCCCCTGCGGC ATTGCC GCCGCCGGGGAGC-GCG GTTACTTCCAATGGC TERM 2011 2747023 - 2746987 - R 100 -18 -3.59979 | gap 1, opp_overlap 2746986 2746985 CCCCGGGACGCCAAA GCTGCTCCCCTGCGGCA TTGC CGCCGCCGGGGAGC-GC GGTTACTTCCAATGG Rmet_2525 2748576 - 2747026 - | AMP-dependent synthetase and ligase Rmet_2526 2749563 - 2748694 - | short-chain dehydrogenase/reductase SDR Rmet_2527 2750026 - 2749607 - | MaoC-like dehydratase Rmet_2528 2750499 - 2750050 - | hypothetical protein Rmet_2529 2751759 - 2750566 - | lipid-transfer protein Rmet_2530 2752927 - 2751791 - | acyl-CoA dehydrogenase-like protein TERM 2012 2753449 - 2753469 + G 71 -10.3 -3.59966 | GAGGAAATGCACCGC GCCGGCATC TCG GGGGCCGGC TTCTCTCTGCACTCT Rmet_2531 2753206 - 2754345 + | acyl-CoA dehydrogenase-like protein Rmet_2532 2754413 - 2755600 + | lipid-transfer protein Rmet_2533 2755689 - 2756519 + | short-chain dehydrogenase/reductase SDR Rmet_2534 2759401 - 2756624 - | ATP-dependent transcription regulator LuxR TERM 2013 2756956 - 2756936 - G 75 -6.7 -4.36914 | GCGCCTGGCATAAAA GGCCACGAC CGG GTCGAGCCC CTGCTCGTCCAGCAA Rmet_2535 2759742 - 2760716 + | hypothetical protein TERM 2014 2761695 - 2761679 - g 71 -7.9 -4.07568 | overlap 2761680 CTTGCTGCTGCAAAA GCTCGGC CTG GCCGAGG ACCCGCGCTTCGCCC Rmet_2536 2760930 - 2762051 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_2537 2762065 - 2762814 + | hypothetical protein TERM 2015 2762889 - 2762874 - f 100 -11.8 -6.37666 | AGAAAACAAAAAAAA CCGGCC AACG GGCCGG CATGAAAATACCTGC Rmet_2538 2763333 - 2764481 + | porin Rmet_2539 2764634 - 2765206 + | hypothetical protein TERM 2016 2765484 - 2765468 - f 84 -3.7 -5.26875 | overlap 2765442 2765471 TGCCGAAGCAAAAAA GAAGG GCCCGTT CCTTC ACGGGCCCAAGAGTC TERM 2017 2765492 - 2765471 - f 100 -13 -4.72473 | overlap 2765442 2765468 CGAAGCAAAAAAGAA GGGCCCGT TCCTTC ACGGGCCC AAGAGTCTCTCCTCG TERM 2018 2765795 - 2765818 + F 76 -9.4 -4.09519 | GTGATCGGCGGATGG CCAGGGCGGC CAGC GCCGCCACGG TTATTTCTGACTAAT TERM 2019 2766239 - 2766225 - g 74 -10 -3.75024 | GTCGACCACCAACAA TCGCGA GCG TCGCGA ACAGGTCGCCTTCAC Rmet_2540 2765851 - 2766783 + | extracellular solute-binding protein Rmet_2541 2766916 - 2768103 + | benzoate transporter Rmet_2542 2768690 - 2768166 - | hypothetical protein TERM 2020 2769304 - 2769335 + G 80 -8.8 -4.38154 | gap 1, overlap 2769294 CTGGCTCGGCATCGG GCTG-ATCATTGCCG GCG TGGCGGTGATCCAGC TTTTCTCGAAGATGT Rmet_2543 2769029 - 2769358 + | small multidrug resistance protein Rmet_2544 2769712 - 2769386 - | hypothetical protein Rmet_2545 2769981 - 2771063 + | fimbrial protein TERM 2021 2771117 - 2771096 - T 74 -7.3 -4.35524 | TGGCCAAATTGAAAA CAGACCATC GTGA AATGGCCTG CCAAAAGGTGGATAG Rmet_2546 2771401 - 2771153 - | hypothetical protein Rmet_2547 2772294 - 2773127 + | proline hydroxylase-like protein TERM 2022 2773263 - 2773238 - f 72 -11.1 -3.28712 | CGGCCTTGTCCACAA GATGGGGCGCC TCCA GCCACCCCATC TACCGTTGGCCACGT Rmet_2548 2773427 - 2773801 + | hypothetical protein Rmet_2549 2774921 - 2773950 - | hypothetical protein TERM 2023 2775009 - 2775031 + r 91 -19.2 -3.18264 | opp_overlap 2775009 2775012, overlap 2775012 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2024 2775031 - 2775009 - R 90 -19.2 -3.07816 | opp_overlap 2775009 2775012, overlap 2775012 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2025 2775012 - 2775028 + r 93 -15.1 -3.73647 | opp_overlap 2775009 2775012, overlap 2775009 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 2026 2775028 - 2775012 - R 90 -15.1 -3.68569 | opp_overlap 2775012 2775009, overlap 2775009 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_2550 2775255 - 2775040 - | hypothetical protein Rmet_2551 2776142 - 2775309 - | ATPase Rmet_2552 2777578 - 2776139 - | integrase catalytic subunit Rmet_2553 2778259 - 2777690 - | hypothetical protein Rmet_2554 2779044 - 2778739 - | hypothetical protein TERM 2027 2779649 - 2779633 - R 100 -8 -5.35222 | opp_overlap 2779632 2779639 2779640 AAAAGCGAGAAAAAA CCTAGG AGAAA CCTAGG GGTTTCATTTCGCTA Rmet_2555 2779925 - 2779662 - | hypothetical protein Rmet_2556 2780837 - 2780001 - | integrase catalytic subunit Rmet_2557 2781235 - 2780834 - | transposase IS3/IS911 TERM 2028 2781118 - 2781146 + g 75 -4 -4.65916 | gap 2, overlap 2781117 2781118 AAACCGTGGCACCCG GCT--CCATCGTTT CCT GAACGATGGCGAGC TTTTCTTGGACTGAA Rmet_2558 2781834 - 2781574 - | hypothetical protein TERM 2029 2781985 - 2781945 - R 93 -11.2 -4.40358 | gap 1, overlap 2781949 AGGCACGCCAGAAAA GCAACAAGCCCCAAG-TCC TTTC GGAGCCTGGGGCCTGTAAC CTCTAACAAGGAATG TERM 2030 2781981 - 2781949 - R 85 -12.8 -3.75517 | gap 1, overlap 2781945 ACGCCAGAAAAGCAA CAAGCCCCAAG-TCC TTTC GGAGCCTGGGGCCTG TAACCTCTAACAAGG Rmet_2559 2782988 - 2782320 - | resolvase-like protein Rmet_2560 2784375 - 2783458 - | hypothetical protein Rmet_2561 2785938 - 2784562 - | phage integrase Rmet_2562 2786232 - 2787002 + | protein serine/threonine phosphatases TERM 2031 2787078 - 2787057 - f 100 -13 -4.32857 | opp_overlap 2787057 CGCCTCAAATAGAAA GCCCGCCA ACTGAG TGGCGGGC TTGGGTTGCGGACGG TERM 2032 2787057 - 2787078 + F 74 -13 -3.17075 | opp_overlap 2787057 CGCCTCAAATAGAAA GCCCGCCA ACTGAG TGGCGGGC TTGGGTTGCGGACGG Rmet_2563 2787140 - 2787463 + | hypothetical protein Rmet_2564 2787819 - 2789723 + | DEAD/DEAH box helicase-like protein TERM 2033 2789754 - 2789725 - T 86 -12.3 -3.93695 | opp_overlap 2789732, overlap 2789732 GTTACGAGCGATAAA TAAAAAAGGCACC TTCG GGTGCCTTTTTTT ATGCCGCCGGCTTGC TERM 2034 2789732 - 2789747 + T 100 -10.4 -5.60993 | opp_overlap 2789725 2789732 GCGATAAATAAAAAA GGCACC TTCG GGTGCC TTTTTTTATGCCGCC TERM 2035 2789747 - 2789732 - T 100 -10.4 -5.72622 | opp_overlap 2789732, overlap 2789725 GCGATAAATAAAAAA GGCACC TTCG GGTGCC TTTTTTTATGCCGCC Rmet_2565 2791056 - 2789800 - | hypothetical protein TERM 2036 2791102 - 2791088 - R 93 -8.5 -4.87803 | GAGGGTGAAAGAAAA GCCGG ACACG CCGGC TGCGCGCATTATGAC TERM 2037 2791114 - 2791135 + r 70 -10.1 -3.53091 | opp_overlap 2791119 CGGCTGCGCGCATTA TGACACCGG CGAG CCGGTGCCA TTTCCCGCGCGCCCT Rmet_2566 2792275 - 2791187 - | hypothetical protein TERM 2038 2792571 - 2792555 - H 75 -7.9 -4.27316 | opp_overlap 2792548 GCGCCCAACGCAAAA CGCCGGA GCA TCCGGTG TCAGCGTCCCTTCCA TERM 2039 2792823 - 2792800 - H 90 -4.5 -5.41143 | gap 1, overlap 2792801 2792802 CAGGTGTCAAAAAAA CTTGCTGGCC CGACC GGCCCGCA-G CAATTTGCACTTGAG Rmet_2567 2792847 - 2793545 + | integral membrane protein TerC TERM 2040 2793561 - 2793590 + F 100 -18 -3.57462 | opp_overlap 2793546 2793568, overlap 2793568 CACCCCGCGTCTGAC GCAGAAAGCCGC CTTCGT GCGGCTTTCTGC TTTCAGGCTAAAATC thyA 2793653 - 2794447 + | thymidylate synthase Rmet_2569 2794444 - 2794944 + | dihydrofolate reductase TERM 2041 2794949 - 2794984 + T 100 -26.2 -3.22476 | opp_overlap 2794949 GGGAAGAATAAAAAA GGGCGGCGCAAACGGG TTCA CCCGCTTGCGCCGCCC TTCGTCGTCCCTGAT TERM 2042 2794984 - 2794949 - T 100 -28.4 -5.64873 | opp_overlap 2794949 GGGAAGAATAAAAAA GGGCGGCGCAAACGGG TTCA CCCGCTTGCGCCGCCC TTCGTCGTCCCTGAT Rmet_2570 2796410 - 2795043 - | microcin-processing peptidase 1 Rmet_2571 2796459 - 2797067 + | hypothetical protein mogA 2797064 - 2797714 + | molybdenum cofactor biosynthesis protein Rmet_2573 2798674 - 2797793 - | auxin efflux carrier Rmet_2574 2799365 - 2798748 - | oligoribonuclease TERM 2043 2799281 - 2799301 + gH 71 -8.9 -3.70902 | opp_overlap 2799273 2799272, overlap 2799284 CGATAATCCGGTCGG TGTCCGGCT GCA GGCCGGTCA TTTCCATGTCCAACC TERM 2044 2799312 - 2799327 + gH 70 -4.7 -4.4267 | GGTCATTTCCATGTC CAACC AGACGA GGTTG TTTTCACTTTTGACG Rmet_2575 2799359 - 2800768 + | peptidase M48, Ste24p Rmet_2576 2800765 - 2801736 + | ribosome-associated GTPase Rmet_2577 2801771 - 2802088 + | hypothetical protein TERM 2045 2802145 - 2802114 - T 95 -16.1 -3.85698 | opp_overlap 2802114 2802121, overlap 2802121 GGCCGCCGGGAGAAA GAAAAAAGCGCCA ACGATG TGGCGCTTTTTTC TTTGCGGGCATTGCG TERM 2046 2802114 - 2802145 + T 93 -16.1 -3.55622 | opp_overlap 2802114 2802121, overlap 2802121 GGCCGCCGGGAGAAA GAAAAAAGCGCCA ACGATG TGGCGCTTTTTTC TTTGCGGGCATTGCG TERM 2047 2802138 - 2802121 - T 100 -8.4 -5.72622 | opp_overlap 2802121 2802114, overlap 2802114 GGGAGAAAGAAAAAA GCGCCA ACGATG TGGCGC TTTTTTCTTTGCGGG TERM 2048 2802121 - 2802138 + T 100 -8.4 -5.63517 | opp_overlap 2802114 2802121, overlap 2802114 GGGAGAAAGAAAAAA GCGCCA ACGATG TGGCGC TTTTTTCTTTGCGGG Rmet_2578 2803165 - 2802185 - | adenosylcobinamide-phosphate synthase TERM 2049 2803109 - 2803096 - G 72 -6.7 -4.24948 | opp_overlap 2803089 2803103 GCACGATATCGAAAA TCGGA TTGT TCCGA CCCAAGGCGCGGAAC TERM 2050 2803327 - 2803310 - R 100 -14.1 -4.98672 | GGTAAAAATACAAAA CGCCCGC CGAA GCGGGCG TCAATGCCACGAGGT Rmet_2579 2804059 - 2803361 - | Pirin-like protein Rmet_2580 2804111 - 2805139 + | LysR family transcriptional regulator TERM 2051 2805945 - 2805909 - gT 73 -13.7 -2.80784 | opp_overlap 2805911, overlap 2805899 2805906 GAAATTGAGCAAGCA GAGCGGCGCGCAAGC GCTCGAT GCTTCGGCGCCGCTC GATGCGCTCCGCACT Rmet_2582 2807726 - 2806056 - | DEAD/DEAH box helicase-like protein Rmet_2581 2805181 - 2806113 + | glutamyl-Q tRNA(Asp) synthetase TERM 2052 2806898 - 2806924 + gF 74 -11.6 -3.53012 | overlap 2806905 TCGTCACCGGCTGCT TCAGGTAGCTGG AGG CCAGCTTCTTGA TTTCGGGCGAGAACG TERM 2053 2806905 - 2806917 + gF 73 -9.1 -3.89354 | overlap 2806898 CGGCTGCTTCAGGTA GCTGG AGG CCAGC TTCTTGATTTCGGGC TERM 2054 2808685 - 2808659 - gR 70 -2.1 -4.70659 | opp_overlap 2808678, overlap 2808661 CGCTACACGGAAAAA GACGTGCGC GTGCTGGTG GCGCGCGGC AGCCGCGCCTTCCTG Rmet_2583 2807714 - 2809417 + | alkaline phosphatase Rmet_2584 2810499 - 2809486 - | hypothetical protein TERM 2055 2810516 - 2810545 + rH 89 -4.2 -5.18355 | gap 1, overlap 2810518 2810519 TTGCTTCCTCCAATT GC-TGCCGGCG AACAGGACA CGCCGGCCTGC TTTTTCGTTTTTGAG Rmet_2585 2812212 - 2810569 - | propionate CoA-transferase TERM 2056 2810720 - 2810735 + gH 70 -10.4 -3.53012 | AGGCGAGCATCGCCC TGCGCG TCAG CGCGCA TTTCGAACACGGCAC TERM 2057 2812267 - 2812287 + Gr 71 -7.6 -4.10453 | opp_overlap 2812286, overlap 2812272 2812284 GGACTGTCCTGCCAT CGTGGTTT TCGCC GAACCACG TTTTGCGAACATTTG Rmet_2586 2812199 - 2813176 + | IclR family transcriptional regulator TERM 2058 2813243 - 2813216 - TR 100 -10.5 -4.98531 | gap 1 CCCCGAAAGGAAAAA GCCCCGCTGGCC GGGGA GGTC-GCGGGGC TGAAGTGGTAGCGGG Rmet_2587 2813974 - 2813366 - | hypothetical protein TERM 2059 2814331 - 2814352 + G 71 -10.1 -3.66732 | overlap 2814343 2814346 TTCACTGGTTGCCAC CTTCGCGCC TGAC GGCCCGAAG TTCTTCGGGTCATTC TERM 2060 2814490 - 2814470 - g 71 -7.5 -4.17556 | TACATCGTCAAGAAA GGCGGCG TGCTGTT CGCCACC AAGGTAGGCACGGCG Rmet_2588 2814245 - 2815228 + | 2-keto-3-deoxygluconate permease Rmet_2589 2815225 - 2816457 + | type III effector Hrp-dependent outers TERM 2061 2816847 - 2816835 - g 85 -7.7 -4.71426 | overlap 2816837 2816838 GGCGCAGGAAGAAAA GATCG ATG CGATC TGCACCGCGCCGCTG pdxA 2816488 - 2817489 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2062 2817552 - 2817571 + F 100 -13.6 -4.89567 | opp_overlap 2817550, overlap 2817548 CGCTGCGGTAAGATC GGGGATCG TTTT CGATCCCC TTTTCTCTTTTCCCA Rmet_2591 2817590 - 2818366 + | DeoR family transcriptional regulator Rmet_2592 2819203 - 2818406 - | hypothetical protein Rmet_2593 2819243 - 2820481 + | glycosyl transferase family protein TERM 2063 2820561 - 2820529 - T 100 -25.7 -3.04144 | CGGCGATTGCCAATA GCGTGCAGCGGGACA CGA CGTCCCGCTGCACGC ATGATGACCGCGGTA Rmet_2594 2821888 - 2820599 - | hypothetical protein TERM 2064 2821303 - 2821337 + g 76 -13.6 -3.14132 | gap 1, opp_overlap 2821324 2821327, overlap 2821324 2821325 TGCCAATGGTGTTGC CGGGAGCGCCGCTGC CAGACA GCA-CGGCGCTGCCG TTGGTGCCAGGCGCG TERM 2065 2821516 - 2821532 + g 71 -10.1 -3.59979 | opp_overlap 2821511, overlap 2821518 CAGAAAGAATGGTGT TGCCGGC TGC GCCGGTA TTTCCGGTGGCGCCC Rmet_2595 2822098 - 2822355 + | hypothetical protein TERM 2066 2822795 - 2822778 - g 76 -9.8 -4.07568 | GGTGGTGGTGGAAAA CCGCCC CGGTGC GGGCGG CATGGTCGGCACGGA Rmet_2596 2822572 - 2823555 + | hypothetical protein TERM 2067 2823621 - 2823574 - T 100 -22.8 -3.21099 | gap 1, opp_overlap 2823569, overlap 2823575 2823577 TCGGGGCATCAGCAA GGACATCATCGTGGGGCGCGGGC AAG GCCTGCGCCCCACG-TGACGTCA GGCCATGTTCAGGCC TERM 2068 2823620 - 2823575 - T 100 -26.3 -2.52516 | gap 1, opp_overlap 2823569, overlap 2823574 2823577 CGGGGCATCAGCAAG GACATCATCGTGGGGCGCGGGC AAG GCCTGCGCCCCACG-TGACGTC AGGCCATGTTCAGGC TERM 2069 2823618 - 2823577 - T 100 -23.1 -2.80016 | gap 1, opp_overlap 2823569, overlap 2823575 2823574 GGGCATCAGCAAGGA CATCATCGTGGGGCGCGGGC AAG GCCTGCGCCCCACG-TGACG TCAGGCCATGTTCAG Rmet_2597 2824733 - 2823630 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_2598 2826856 - 2824730 - | CoA-binding Rmet_2599 2828109 - 2826961 - | acyl-CoA dehydrogenase-like protein TERM 2070 2828217 - 2828187 - R 93 -11.9 -4.42062 | gap 1 CACCGTCGAAACAAA GCCGGC-CACAGGA GCGG TCCCATGTGCCGGC CTAATCCTTCTGGGC Rmet_2600 2828967 - 2828218 - | IclR family transcriptional regulator TERM 2071 2828586 - 2828539 - G 72 -13.4 -3.15861 | gap 1 CAGCACCGCCAGCAA CGCCTTGCCGAGCGCCGTGGCGT GCA AGGCCA-GGCGCTTGCCAACGCG CAGTACGTAACGCAG Rmet_2601 2829201 - 2829605 + | hypothetical protein Rmet_2602 2829602 - 2830750 + | thiolase TERM 2072 2830748 - 2830800 + F 86 -17.7 -2.70932 | gap 1 CTGGCAGCATCGCAC TGACCGTG-CGGATGCGCCTGCCG CGAGCA CGGCTGGCGCATCCGTCGCGCACA TCATTCCAGGCAAGG Rmet_2603 2830824 - 2831615 + | short chain enoyl-CoA hydratase TERM 2073 2832371 - 2832406 + G 80 -12.6 -3.74693 | gap 1 ACGCGGGCTCGGCAG GCTGTCACGGCCCGAGG ACA TCTCGGGC-GTGGTGGC TTTCCTGGCATCGGA Rmet_2604 2831670 - 2832482 + | short-chain dehydrogenase/reductase SDR Rmet_2605 2832534 - 2833562 + | 2-nitropropane dioxygenase, NPD TERM 2074 2833645 - 2833620 - T 100 -15.5 -4.84918 | opp_overlap 2833615 2833614 GCCAGAAACAGAAAA GGGGTTACGGC AGAA ACCGTAACCCC TTCGCATTTACAACA Rmet_2606 2836321 - 2833754 - | RNA polymerase sigma factor RpoD TERM 2075 2836139 - 2836168 + g 95 -12.2 -4.25104 | gap 2 CCTGGCGGAAGTGGA TCCG-GCGG-GCGC AGTT GCGCTCCGCGCGGA TTTTGCTGGCGCAGA TERM 2076 2836451 - 2836461 + r 76 -5.4 -4.68424 | CAAGGCTTAAGCAGT TTGG CCG CCAA TTTTTCCATCGGTTC dnaG 2838354 - 2836513 - | DNA primase Rmet_2608 2839031 - 2838582 - | hypothetical protein TERM 2077 2839139 - 2839099 - R 72 -14.2 -2.65491 | gap 2, opp_overlap 2839106 2839137, overlap 2839106 AAACCCGACCATAAC GCA-AAAACCCGCCG-GAGC CAT GCTCACAGCGGGTTTCGTGC TGACGCTAAGACGCG TERM 2078 2839131 - 2839106 - R 100 -13.3 -4.78752 | gap 1, opp_overlap 2839106, overlap 2839099 ACCATAACGCAAAAA CCCGCCG-GAGC CAT GCTCACAGCGGG TTTCGTGCTGACGCT TERM 2079 2839106 - 2839131 + r 80 -11.1 -3.78953 | gap 1, opp_overlap 2839106 2839099 ACCATAACGCAAAAA CCCGCCG-GAGC CAT GCTCACAGCGGG TTTCGTGCTGACGCT Rmet_2609 2839368 - 2839156 - | SSU ribosomal protein S21P Rmet_2610 2840666 - 2839530 - | HI0933-like protein Rmet_2611 2840949 - 2841239 + | hypothetical protein Rmet_2612 2841236 - 2841961 + | O-sialoglycoprotein endopeptidase Rmet_2613 2842060 - 2844099 + | alkaline phosphatase Rmet_2614 2844969 - 2844166 - | putative GTP cyclohydrolase TERM 2080 2845265 - 2845243 - R 100 -17.7 -4.85782 | opp_overlap 2845243 GCGCCCAAAAACAAA CCGGCGCGG GGTTG CCGCGCCGG TTTTCAGTACCGCGT TERM 2081 2845243 - 2845265 + r 100 -17.7 -4.18197 | opp_overlap 2845243 GCGCCCAAAAACAAA CCGGCGCGG GGTTG CCGCGCCGG TTTTCAGTACCGCGT Rmet_2615 2847214 - 2845301 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 2082 2846519 - 2846533 + g 71 -10 -3.61894 | opp_overlap 2846503 CGTGGCCGGCACGAC CATGCC CTT GGCATG TTCTTCCAGGCGCTT TERM 2083 2847230 - 2847250 + r 82 -8.9 -4.30448 | overlap 2847223 GGTGTCCGTTCGGCC GCCGGATTC TGT GCGTCCGGC TTTTCAGTTCAGTTT Rmet_2616 2848143 - 2847259 - | farnesyl-diphosphate synthase TERM 2084 2848131 - 2848091 - G 86 -15.3 -3.53091 | opp_overlap 2848079, overlap 2848077 AGGGCCGCTTCCAAA GCGGCTTCGGTGCGGGCGC CCT GCGCCCGCATCCAAGTGGC GAAATCGCTCATTCG Rmet_2617 2848448 - 2848140 - | exodeoxyribonuclease VII small subunit TERM 2085 2848631 - 2848646 + H 73 -4.6 -4.65895 | overlap 2848587 2848587 2848639 AAAGGGCACCTCCAT GACGAC CCGG GTCGAC TTTTTCGCTAAAAAG Rmet_2618 2848907 - 2850010 + | Rieske (2Fe-2S) region TERM 2086 2850047 - 2850078 + F 91 -18.8 -3.14132 | opp_overlap 2850053, overlap 2850053 TTATCGGTGGATGCC AGCAAACGGACCGC GAGA GCGGTCCGTTTGCA TTGGTGCGGCCGCCG TERM 2087 2850053 - 2850072 + F 93 -15 -3.78329 | opp_overlap 2850053, overlap 2850047 GTGGATGCCAGCAAA CGGACCGC GAGA GCGGTCCG TTTGCATTGGTGCGG TERM 2088 2850072 - 2850053 - f 93 -15 -3.74693 | opp_overlap 2850053 2850047 GTGGATGCCAGCAAA CGGACCGC GAGA GCGGTCCG TTTGCATTGGTGCGG Rmet_2619 2850210 - 2851130 + | hypothetical protein Rmet_2620 2851183 - 2852040 + | rhodanese-like protein Rmet_2621 2852938 - 2852063 - | zinc/iron permease Rmet_2622 2853937 - 2853062 - | twin-arginine translocation pathway signal TERM 2089 2854056 - 2854015 - R 90 -17.9 -3.15579 | gap 1, opp_overlap 2854053 2854055 GCAATCCTGGACCAA GTGG-GGCCGGCGGCACGCA TCC CGCGCGGCGCCGGCCTCCGC CCGCTGCGCCTAGTG Rmet_2623 2855469 - 2854066 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2090 2855019 - 2855009 - G 72 -6.8 -4.23213 | GGCACACCGAAGAAA TGCG TGA CGCA ACCGATGGCGAGCAC Rmet_2624 2858506 - 2855702 - | DNA polymerase I Rmet_2625 2858739 - 2859458 + | hypothetical protein TERM 2091 2859883 - 2859855 - g 77 -8.2 -4.29508 | opp_overlap 2859857, overlap 2859841 2859856 AGCGAGATCAACAAA CCGCGCGAGC-CGA GCT TCGTGCT-GCGCGA GCGCGATGGCACGCA Rmet_2626 2859633 - 2860052 + | putative transmembrane protein Rmet_2627 2860222 - 2861208 + | homoserine kinase Rmet_2628 2861215 - 2862018 + | putative transmembrane protein Rmet_2629 2864433 - 2862070 - | ATP-dependent DNA helicase UvrD TERM 2092 2865731 - 2865698 - g 74 -11.7 -3.61089 | gap 1, overlap 2865692 GGTCAAGAAGCACAA GCTGATGGTGCCGCGC AGC GAGCG-CACCAGCAGC GTGATCGAACCGATG TERM 2093 2866362 - 2866307 - g 80 -14 -3.30452 | CAAGAAGATGAGCAA GTCCGAGGGCAACACGCTCGATCCGG TGGA CCTGATCGACGGTATCGCGCTCGAAC CGCTGCTCAAGAAGC TERM 2094 2867481 - 2867449 - g 71 -9.2 -3.72576 | gap 1, overlap 2867450 2867453 2867474 TCGTGGCTCAGGAAA CGCAGCGTTTGTCCG ATTT CGAACAGACGCTG-G TCAAGCTTCAGGATC valS 2864652 - 2867519 + | valyl-tRNA synthetase Rmet_2631 2867634 - 2868533 + | UDP-glucose pyrophosphorylase TERM 2095 2868577 - 2868550 - T 100 -19.2 -5.00884 | ATCCGCCTGAAAAAA CGAAGCCGCCCC GGAA GAGGCGGCTTCG GCAGGAAGGCAGAAA TERM 2096 2868597 - 2868620 + T 100 -14.6 -5.47159 | opp_overlap 2868597 GAAGGCAGAAAAAAA CCCCGCTTTG TTAC CGAAGCGGGG TTTTTCTTTATTCCG TERM 2097 2868620 - 2868597 - T 100 -12.4 -5.66684 | opp_overlap 2868597 GAAGGCAGAAAAAAA CCCCGCTTTG TTAC CGAAGCGGGG TTTTTCTTTATTCCG Rmet_2632 2868962 - 2868642 - | hypothetical protein TERM 2098 2869885 - 2869842 - g 86 -15.2 -3.51232 | gap 1, opp_overlap 2869841 2869840 2869860 2869862, overlap 2869823 2869838 TGCCGCCGAAACCAA CGGC-GCCGCAACGCGGGCGA GTG TCGCCAGCGCTGACGCTGCCG AGTCTATTATCCAGC Rmet_2633 2869138 - 2869917 + | ChaC-like protein Rmet_2634 2869939 - 2870748 + | ankyrin Rmet_2635 2872484 - 2870784 - | acyl-CoA synthetase Rmet_2636 2872719 - 2873561 + | thioredoxin Rmet_2637 2874075 - 2873593 - | hypothetical protein TERM 2099 2873923 - 2873937 + g 72 -3.4 -4.65895 | opp_overlap 2873912 2873924, overlap 2873924 GAAAGCGGCCAGGAA ACCGGC ATC GTCGGC TTTTTCCATGGCCGC Rmet_2638 2874209 - 2874787 + | putative ATP-ase Rmet_2639 2875684 - 2874776 - | UBA/THIF-type NAD/FAD binding fold TERM 2100 2874901 - 2874861 - G 100 -14 -4.21462 | gap 2, opp_overlap 2874886 2874889 ACCGAGGAGCCAAAA CCCGCG-CAGGCCA-GCCCC TGC GGGCCCTGGCGTGGCGCGGG CGGCACCTCGTCGAT TERM 2101 2875605 - 2875583 - G 91 -16.3 -3.48276 | GCTTTCGTGAGACAA CGGCGCAGG CAAGT CCTGCGCCG CGAGAGGCGTGGGGG TERM 2102 2875650 - 2875683 + g 80 -8.9 -4.36914 | gap 1, opp_overlap 2875673 TCTTGTTGCTGTGTC TGCCGGCACCGGCT GCCGACG AACCG-TGCCGGCA TTTTATGCCAGCCGC TERM 2103 2877919 - 2877897 - g 88 -9 -4.66833 | GGCGAACCTGAAAAA GCGGCCTGTC ATT GCCACGCCGC CGGGCAAGCCCGGTC Rmet_2640 2875825 - 2878032 + | AsmA TERM 2104 2878237 - 2878261 + F 100 -11.4 -5.27335 | overlap 2878240 CATTGACGACCTTGT CTGGTGCGGC CTCGC GCCGCACTGG TTTTTCTTTCGCGCG TERM 2105 2878240 - 2878258 + F 74 -11.7 -3.45131 | overlap 2878237 TGACGACCTTGTCTG GTGCGGC CTCGC GCCGCAC TGGTTTTTCTTTCGC TERM 2106 2879025 - 2879043 + G 71 -12.4 -3.27774 | CGCCGTGCTTTCGGC CGCGTGGG ATC TCCACGCG TTCCTGATTCCGATC Rmet_2641 2878342 - 2879532 + | major facilitator transporter TERM 2107 2879946 - 2879907 - g 81 -12 -3.85704 | opp_overlap 2879905 2879903 2879907, overlap 2879899 TCACCAATTACGAAA GCCGCAAGGGCGTTGACC TGCT GGCCAACCCGCGCGCGGC TCTGTTGTTCCATTG Rmet_2642 2879666 - 2880304 + | pyridoxamine 5'-phosphate oxidase Rmet_2643 2880519 - 2881760 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2108 2882478 - 2882503 + G 79 -11.1 -3.91897 | ACGCCACGCTACATC CGTATGCTGCG CGAG CGCGGCGTGCG TTTCTGCCTGGCCGC Rmet_2644 2881764 - 2882834 + | hypothetical protein Rmet_2645 2883373 - 2882831 - | methionine sulfoxide reductase A Rmet_2646 2883606 - 2884220 + | flavin reductase-like, FMN-binding Rmet_2647 2884701 - 2884222 - | AsnC family transcriptional regulator Rmet_2650 2885545 - 2886801 + | kynureninase TERM 2109 2887308 - 2887288 - g 81 -13.3 -3.61715 | overlap 2887291 2887295 CATCCTCGGCAACAA GAACGCAGC CAT GCTGCGTCC GCACGCGCATCGGCC TERM 2110 2887305 - 2887291 - g 81 -11.4 -3.9461 | overlap 2887288 2887295 CCTCGGCAACAAGAA CGCAGC CAT GCTGCG TCCGCACGCGCATCG Rmet_2651 2886815 - 2887714 + | tryptophan 2,3-dioxygenase Rmet_2652 2888601 - 2887777 - | IclR family transcriptional regulator TERM 2111 2889763 - 2889714 - g 71 -9.8 -3.78934 | GCTGGTGCAGAAGAA GCTGGCCGACATGCAGACCGAG ATCACG CTGGGCCTGCAAGGCTGCCTGC GCCTGGGCCGCATGA Rmet_2653 2888824 - 2890017 + | acyl-CoA dehydrogenase-like protein TERM 2112 2890063 - 2890037 - T 100 -13.1 -5.2189 | gap 1 GGAAGCATGAAAAAA GCCCGGTCTTGA GTCA TCAAG-CCGGGC GGAAGCACACTACCA TERM 2113 2890085 - 2890102 + T 71 -8.3 -4.10429 | opp_overlap 2890085 ACACTACCAAGGAGA CGACGGG CAAG CCCGCCG TTTTACGACATCATT TERM 2114 2890139 - 2890167 + T 100 -24.6 -5.2166 | opp_overlap 2890139 GTCAGTGGCACTGAA CCGGGCCCGGGG GCAAA CCCCGGGCCCGG TTTTTTCACTTGTTG TERM 2115 2890167 - 2890139 - T 100 -24.6 -3.06183 | opp_overlap 2890139 GTCAGTGGCACTGAA CCGGGCCCGGGG GCAAA CCCCGGGCCCGG TTTTTTCACTTGTTG Rmet_2654 2890811 - 2890173 - | 1-Cys peroxiredoxin Rmet_2655 2891159 - 2891434 + | protein of unknown function DUF883, ElaB TERM 2116 2891491 - 2891526 + F 82 -9 -4.41494 | gap 2, overlap 2891491 GACGCCTTGGCCCGA GG-CCCGGTCCG-CGG CACTGC CCGCCGCACCGGGACC TTTTCATTGCAGATG Rmet_2656 2891580 - 2891957 + | putative transmembrane protein Rmet_2657 2891954 - 2892490 + | hypothetical protein TERM 2117 2894582 - 2894547 - T 91 -14 -3.78775 | opp_overlap 2894547 2894548 2894550, overlap 2894548 TCCGGCACCATCAAA CGACTGCGCCGCACCA GATG CGGCACGGCGCAATCA TTGTCAGCGAGCCCG TERM 2118 2894581 - 2894548 - T 79 -15.3 -2.87051 | opp_overlap 2894548 2894547 2894550, overlap 2894547 CCGGCACCATCAAAC GACTGCGCCGCACCA GATG CGGCACGGCGCAATC ATTGTCAGCGAGCCC Rmet_2660 2895459 - 2894650 - | hypothetical protein Rmet_2661 2895956 - 2895705 - | hypothetical protein TERM 2119 2895985 - 2895960 - R 100 -16.9 -5.45802 | opp_overlap 2895960 GCGCCAAAACAAAAA GGGCCTGTGAC TTTC GCCACAGGCCC TTTGTAATGCTGGTG TERM 2120 2895960 - 2895985 + r 95 -14.7 -4.00038 | opp_overlap 2895960 GCGCCAAAACAAAAA GGGCCTGTGAC TTTC GCCACAGGCCC TTTGTAATGCTGGTG Rmet_2662 2898259 - 2896361 - | Phage/plasmid primase P4-like protein TERM 2121 2897218 - 2897228 + g 76 -2.4 -4.87665 | AACCCATGAACTCTT GCAG AAA CAGC TTTTTCTCGCTGCCA TERM 2122 2897499 - 2897528 + g 73 -5.7 -4.41494 | gap 1 GGGTTAGGCAGCAGT GCTG-CATACGGTG AAT CGTCGTTTGTCAGC TTTTGCTTCAGACTC TERM 2123 2898299 - 2898280 - R 95 -11.4 -4.72272 | overlap 2898264 2898263 CTTTTTCATCAAAAA GAACCCGC CGAA GCGGGCTC CAGTTAGCTGTGTTA Rmet_2663 2899202 - 2898606 - | hypothetical protein TERM 2124 2899208 - 2899180 - G 100 -19 -5.45652 | ATGTGCAATAAAAAA TCCCCGATGTCC GGCCT GGACATCGGGGA TCTGGAATAAGGAAA Rmet_2664 2899635 - 2899246 - | hypothetical protein TERM 2125 2899477 - 2899451 - G 100 -8.7 -5.52807 | AATAACAAAGAAAAA CCCCAACACCC GATGA GAACGTTGGGG TAGCTGGCGAAGCCG Rmet_2665 2899719 - 2900036 + | hypothetical protein Rmet_2666 2900827 - 2900189 - | hypothetical protein Rmet_2667 2902126 - 2900852 - | McrBC 5-methylcytosine restriction system component-like protein TERM 2126 2901602 - 2901591 - G 73 -5.8 -4.38154 | opp_overlap 2901591 ACAGCCTTGATAAAA CGGT TAGG ACCG TTATCGGCCGTCCGG Rmet_2668 2903040 - 2902129 - | ATPase Rmet_2669 2903458 - 2903042 - | hypothetical protein Rmet_2670 2904770 - 2903604 - | DNA methylase N-4/N-6 TERM 2127 2904985 - 2904949 - R 95 -12.4 -4.15453 | gap 1, opp_overlap 2904956, overlap 2904956 CAATGGACCGGAAAA GCAAAAAGGCCCGTGGC ATTC ACCACAGGCC-TTTCGC TTGATACTGGTGGGT TERM 2128 2904956 - 2904979 + r 71 -9.5 -3.79043 | opp_overlap 2904949 2904956 CCGGAAAAGCAAAAA GGCCCGTGG CATTCA CCACAGGCC TTTCGCTTGATACTG TERM 2129 2904979 - 2904956 - R 100 -12.4 -5.0925 | opp_overlap 2904956, overlap 2904949 CCGGAAAAGCAAAAA GGCCCGTGGC ATTC ACCACAGGCC TTTCGCTTGATACTG Rmet_2671 2906253 - 2905138 - | protein of unknown function DUF395, YeeE/YedE Rmet_2672 2907007 - 2906324 - | ExsB TERM 2130 2907176 - 2907147 - R 82 -12.9 -3.60098 | opp_overlap 2907152 2907153, overlap 2907153 ATGCGGCAGCCCAAA GAAAAAGGCCCGC TCGC GCGGACCCTTTCC TGGACTACATACCGG TERM 2131 2907170 - 2907153 - R 100 -10.5 -5.28942 | opp_overlap 2907152 2907153, overlap 2907147 CAGCCCAAAGAAAAA GGCCCGC TCGC GCGGACC CTTTCCTGGACTACA Rmet_2673 2907956 - 2907198 - | TPR repeat-containing protein Rmet_2674 2908483 - 2907974 - | OmpA/MotB tolB 2909843 - 2908503 - | translocation protein TolB Rmet_2676 2911140 - 2910058 - | TonB-like protein Rmet_2677 2911601 - 2911164 - | biopolymer transport protein ExbD/TolR Rmet_2678 2912309 - 2911626 - | MotA/TolQ/ExbB proton channel Rmet_2679 2912710 - 2912306 - | 4-hydroxybenzoyl-CoA thioesterase Rmet_2680 2912883 - 2914409 + | serine hydroxymethyltransferase TERM 2132 2914477 - 2914447 - f 100 -27 -3.27022 | opp_overlap 2914447 GTTAGCGCACACGAA CGGCGCTGCCACCT CTG AGGTGGCAGCGCCG TTTCAACAACCAGCA TERM 2133 2914447 - 2914477 + F 100 -27 -3.53012 | opp_overlap 2914447 GTTAGCGCACACGAA CGGCGCTGCCACCT CTG AGGTGGCAGCGCCG TTTCAACAACCAGCA TERM 2134 2914747 - 2914719 - g 100 -16 -5.07486 | CATCGTCAAGAAAAA TGGCTCGCGCGT GGACT ACGCGCGTGCCA AGCTCAAGGATTCGA Rmet_2681 2914555 - 2915022 + | transcriptional regulator NrdR TERM 2135 2915622 - 2915594 - g 70 -7.3 -4.03234 | opp_overlap 2915594 TGCGCGCCAGACAAA CGCCTCGCGATCG CAA CCATCGAGAGCCG TTCTCCGACGGATGC Rmet_2682 2915300 - 2915689 + | hypothetical protein Rmet_2683 2915686 - 2916546 + | putative transmembrane protein Rmet_2684 2916540 - 2917100 + | putative signal peptide protein TERM 2136 2918707 - 2918664 - g 71 -10.4 -3.64822 | gap 4, opp_overlap 2918664 AGTCGGTCATGCAAA CGGC-C-CCGG--ACGGCACGC TCGT GCGCGCCGTAACCGGTGTGCCG TTCGATGACCGGTTC Rmet_2685 2917100 - 2918914 + | putative type 4 fimbrial biogenesis PilY1-related protein transmembrane TERM 2137 2919307 - 2919295 - g 73 -9.1 -3.87815 | GTGCATGTGGACAAA GCGTG TGG CACGC TGGTCCTGCGCAGCA Rmet_2686 2918911 - 2919387 + | pilus assembly protein PilE Rmet_2687 2919389 - 2919913 + | pilus assembly protein Fim Rmet_2688 2919958 - 2921079 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase Rmet_2689 2921107 - 2921739 + | riboflavin synthase subunit alpha TERM 2138 2921845 - 2921809 - T 100 -28.3 -3.07013 | opp_overlap 2921812, overlap 2921812 CACCGGCGCAATACA GAACGGCCACTGGCAAT TCG ATTGCCAGTGGCCGTTC GCTCTTGCTGCGCTG TERM 2139 2921812 - 2921842 + T 100 -24.2 -3.20348 | opp_overlap 2921809 2921812 CGGCGCAATACAGAA CGGCCACTGGCAAT TCG ATTGCCAGTGGCCG TTCGCTCTTGCTGCG TERM 2140 2921842 - 2921812 - T 100 -24.2 -3.68024 | opp_overlap 2921812, overlap 2921809 CGGCGCAATACAGAA CGGCCACTGGCAAT TCG ATTGCCAGTGGCCG TTCGCTCTTGCTGCG Rmet_2690 2922060 - 2921869 - | hypothetical protein Rmet_2691 2923052 - 2922204 - | hypothetical protein Rmet_2692 2924143 - 2923109 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2141 2923607 - 2923584 - G 87 -17.4 -2.80816 | GCGCCATCGACCACA CGCCCGCGCC CCGA GGCACGGGCG TCAAGCAGGGCGCAG Rmet_2693 2924379 - 2925494 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 2142 2925790 - 2925775 - g 88 -10.4 -4.36914 | overlap 2925784 TGGCGCTGCAGAAAA TGGCCG AAAG CGGCCA GTTCGACGCGCTGGT ribH 2925573 - 2926082 + | riboflavin synthase subunit beta nusB 2926075 - 2926590 + | transcription antitermination protein NusB TERM 2143 2926675 - 2926658 - f 89 -12.7 -4.12188 | opp_overlap 2926653 2926658 TCAGCACCGGCAAAA CACCCGC CCCG GCGGGTG TTTTCGTTTGGTCAC TERM 2144 2926658 - 2926675 + F 100 -12.7 -4.58773 | opp_overlap 2926658, overlap 2926653 TCAGCACCGGCAAAA CACCCGC CCCG GCGGGTG TTTTCGTTTGGTCAC Rmet_2696 2926772 - 2927953 + | aminotransferase TERM 2145 2928044 - 2928013 - T 100 -18.2 -3.78022 | opp_overlap 2928020, overlap 2928014 2928020 TTCACAGGCATCAAA CGAAAAAGGCACCC CAAG GGGTGCCTTTTTCA TGAGCGACGAGAATC TERM 2146 2928043 - 2928014 - T 88 -19.5 -2.86492 | opp_overlap 2928020, overlap 2928013 2928020 TCACAGGCATCAAAC GAAAAAGGCACCC CAAG GGGTGCCTTTTTC ATGAGCGACGAGAAT TERM 2147 2928020 - 2928037 + T 100 -12.7 -4.72272 | opp_overlap 2928014 2928013 2928020 GCATCAAACGAAAAA GGCACCC CAAG GGGTGCC TTTTTCATGAGCGAC TERM 2148 2928037 - 2928020 - T 100 -12.7 -5.01811 | opp_overlap 2928020, overlap 2928014 2928013 GCATCAAACGAAAAA GGCACCC CAAG GGGTGCC TTTTTCATGAGCGAC Rmet_2697 2929133 - 2928066 - | lytic transglycosylase, catalytic TERM 2149 2929305 - 2929276 - H 71 -8.5 -4.05446 | GCGCCCAACGAGAAA CAGGGTACGAACC TGGG GAGCCGCACCCTG CCACTAAGCACTCAT TERM 2150 2929668 - 2929683 + H 90 -4.6 -5.4477 | overlap 2929677 ATTTACAATTTCAAC TCGCGC GCCG GCACGA TTTTTTTGCGCCTTT Rmet_2698 2929742 - 2931304 + | 3-octaprenyl-4hydroxybenzoate decarboxylase Rmet_2699 2931391 - 2933400 + | acetoacetyl-CoA synthetase Rmet_2700 2934066 - 2933410 - | glutathione S-transferase-like protein TERM 2151 2935279 - 2935295 + G 78 -4.4 -4.72272 | gap 1 ATCTTGAGACCATCA GC-CTGG TCTT CCAGCGC TTTTTGCTGGCCCAG Rmet_2701 2934351 - 2935583 + | polyhydroxyalkanoate depolymerase, intracellular Rmet_2702 2935682 - 2936587 + | aldose 1-epimerase Rmet_2703 2937059 - 2936670 - | hypothetical protein TERM 2152 2937904 - 2937916 + H 83 -4.7 -5.08601 | overlap 2937905 AACGATGATCGGCGA TCCGC CCG GCGGC TTTTTGTTGCCATGC trmB 2937928 - 2938716 + | tRNA (guanine-N(7))-methyltransferase TERM 2153 2938774 - 2938746 - T 100 -14 -4.20918 | gap 1, opp_overlap 2938746 2938752, overlap 2938752 TCGAATCGCAACAAA GCAAAAGAGGGGC AATC GCCCCTC-TTTGC ATTTCCGATGCCGGG TERM 2154 2938746 - 2938774 + T 73 -14 -2.75844 | gap 1, opp_overlap 2938746 2938752, overlap 2938752 TCGAATCGCAACAAA GCAAAAGAGGGGC AATC GCCCCTC-TTTGC ATTTCCGATGCCGGG TERM 2155 2938769 - 2938752 - T 100 -12.7 -4.67942 | opp_overlap 2938746 2938752, overlap 2938746 CGCAACAAAGCAAAA GAGGGGC AATC GCCCCTC TTTGCATTTCCGATG TERM 2156 2938752 - 2938769 + T 85 -12.7 -3.85165 | opp_overlap 2938752 2938746, overlap 2938746 CGCAACAAAGCAAAA GAGGGGC AATC GCCCCTC TTTGCATTTCCGATG Rmet_2705 2939687 - 2938806 - | undecaprenyl pyrophosphate phosphatase Rmet_2706 2940339 - 2939773 - | putative transmembrane protein Rmet_2707 2940652 - 2940353 - | hypothetical protein Rmet_2708 2940893 - 2941693 + | TetR family transcriptional regulator Rmet_2709 2941954 - 2942607 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase Rmet_2710 2942621 - 2942944 + | rhodanese-like protein Rmet_2711 2943081 - 2944562 + | Type I secretion outer membrane protein, TolC Rmet_2712 2945816 - 2944575 - | O-antigen polymerase TERM 2157 2945791 - 2945771 - G 72 -13.3 -3.12668 | CGGGAAAGGCGAAGA CGAGGACGG TAG CCATCCTCG ACAGGAGCTTGTTGC Rmet_2713 2946749 - 2945940 - | protein of unknown function DUF306, Meta and HslJ Rmet_2714 2948164 - 2946890 - | 3-deoxy-D-manno-octulosonic-acid transferase Rmet_2715 2949255 - 2948164 - | lipopolysaccharide heptosyltransferase I TERM 2158 2948991 - 2948968 - G 83 -14.6 -3.28712 | gap 1 CTCGCCGCGCCAGAA GCGCTTGCGCC AGC GGCGC-AGCGC GAACGGAATCACGCG TERM 2159 2949180 - 2949217 + g 72 -12.7 -3.07816 | gap 1, opp_overlap 2949181 2949182, overlap 2949182 GCGCGGGCAGCCCAA AC-GGAGACACCGCCGCT TGC GGCGACGGTGTCTCCTGG TTCGATACCTGCACG TERM 2160 2949215 - 2949181 - G 93 -17.9 -3.59979 | opp_overlap 2949180 2949182, overlap 2949182 CGCGGGCAGCCCAAA CGGAGACACCGCCGC TTGCG GCGACGGTGTCTCCT GGTTCGATACCTGCA TERM 2161 2949182 - 2949214 + g 93 -19.9 -2.75712 | opp_overlap 2949181 2949182, overlap 2949180 GCGGGCAGCCCAAAC GGAGACACCGCCGCT TGC GGCGACGGTGTCTCC TGGTTCGATACCTGC TERM 2162 2949214 - 2949182 - G 100 -21.4 -2.75844 | opp_overlap 2949182 2949180, overlap 2949181 GCGGGCAGCCCAAAC GGAGACACCGCCGC TTGCG GCGACGGTGTCTCC TGGTTCGATACCTGC Rmet_2716 2950621 - 2949236 - | phosphomannomutase Rmet_2717 2950833 - 2952002 + | glycosyl transferase, group 1 Rmet_2718 2952004 - 2953329 + | sugar transferase Rmet_2719 2953329 - 2954492 + | glycosyl transferase, group 1 Rmet_2720 2954492 - 2955742 + | polysaccharide biosynthesis protein TERM 2163 2956246 - 2956259 + G 75 -6.7 -4.35524 | overlap 2956231 CGGATTGCAACCATT GGCAA TCCG TTGCC TTTTGCATTTCCCGC Rmet_2721 2955739 - 2956833 + | glycosyl transferase, group 1 Rmet_2722 2956931 - 2957788 + | lipopolysaccharide biosynthesis TERM 2164 2957880 - 2957847 - T 100 -23.3 -3.2614 | overlap 2957879 GACGCGGCACACCAA GCTGGTTTCGCGCAC CAAA GCGCGCGAAACCAGC GGATTCCACGACTCC Rmet_2723 2959847 - 2957898 - | polysaccharide biosynthesis protein CapD TERM 2165 2959515 - 2959488 - G 70 -11.4 -3.40565 | gap 1 AACCAGCAACAGGAA CAGCATCGG-CTG GAT CAGGCCAATGCTG CGCGGTACACCATCG Rmet_2724 2961019 - 2959844 - | DegT/DnrJ/EryC1/StrS aminotransferase Rmet_2725 2961626 - 2961081 - | putative acetyltransferase Rmet_2726 2962286 - 2961693 - | sugar transferase Rmet_2727 2963674 - 2962463 - | glycosyl transferase, group 1 TERM 2166 2962946 - 2962935 - G 87 -5.8 -5.00895 | GGGAGCACAGAAAAA GCTG ACAC CAGC TCCGCTACGCCTTTG Rmet_2728 2964782 - 2963664 - | glycosyl transferase, group 1 TERM 2167 2964151 - 2964125 - G 74 -10.2 -3.72324 | gap 1 CATCGCCACCAATAA CGCGGAGCACA AATTTA TG-GCTCCGCG CCAACTCTTGGAGGG Rmet_2729 2965914 - 2965018 - | glycosyl transferase family protein TERM 2168 2965246 - 2965236 - G 70 -2.4 -4.68724 | opp_overlap 2965236 GCAGCGAATAGAAAA GCCG AGT CGCC TTGATCTGCCGCGAC TERM 2169 2966141 - 2966104 - R 70 -3.6 -4.62163 | gap 2, opp_overlap 2966117, overlap 2966117 ACACAAAAACAGAAA GCAGTTCCCGAAATCGCG CTAC CACGATTT-G-GAACTCC AACATCGAAAAATAT Rmet_2730 2966512 - 2966192 - | hypothetical protein Rmet_2731 2967844 - 2966585 - | polysaccharide biosynthesis protein Rmet_2732 2968614 - 2968060 - | dTDP-4-dehydrorhamnose 3,5-epimerase Rmet_2733 2969489 - 2968611 - | glucose-1-phosphate thymidylyltransferase TERM 2170 2968989 - 2969006 + g 82 -5.5 -4.72272 | overlap 2968992 GGTCACGGCATAGTG CGAGCGA GGCT TCGCTGG TTTTTCCTCGAGCGA Rmet_2734 2970421 - 2969501 - | dTDP-4-dehydrorhamnose reductase Rmet_2735 2971475 - 2970411 - | dTDP-glucose 4,6-dehydratase apaH 2971678 - 2972559 + | diadenosine tetraphosphatase TERM 2171 2972620 - 2972648 + T 100 -10.9 -5.08824 | GTTGCATGCCCGGAT CGGCGAGTCCGCT GAT GGCGCGCTTGCCG TTTTTTGCCTGCACC Rmet_2737 2973796 - 2972600 - | hypothetical protein Rmet_2738 2974854 - 2974018 - | lyso-ornithine lipid acyltransferase TERM 2172 2974411 - 2974393 - G 72 -11 -3.54935 | overlap 2974394 CAAATTCGCGTGAAA CGGCAGCA CCT TGCTGCCA TCGGTGGTCGTGCCC Rmet_2739 2976210 - 2974891 - | dihydroorotase pyrB 2977178 - 2976207 - | aspartate carbamoyltransferase catalytic subunit Rmet_2741 2977753 - 2977229 - | pyrimidine regulatory protein PyrR Rmet_2742 2978199 - 2977750 - | Holliday junction resolvase-like protein Rmet_2743 2978761 - 2978180 - | hypothetical protein TERM 2173 2978626 - 2978642 + g 80 -13.7 -3.40403 | GGTTGATCACCAGGC CGAGCGC GCC GCGCTCG TTGTGCTCGCAAAGA Rmet_2744 2979556 - 2978840 - | ribosomal small subunit pseudouridine synthase A Rmet_2745 2979622 - 2981163 + | deoxyribodipyrimidine photo-lyase type I TERM 2174 2981991 - 2982011 + G 74 -11.1 -3.65351 | CATGGTGGCGGCAAG CCTGGTGCG GCG CTCACCAGG TTTCCGTGGCGATAG TERM 2175 2982410 - 2982395 - g 88 -9 -4.63218 | GCTTGGGCAAGAAAA TCGGGA AAGC TCCCGA GTCCGCGCGACAGAC Rmet_2746 2981248 - 2982474 + | acyltransferase 3 Rmet_2747 2983750 - 2982560 - | HemY-like protein TERM 2176 2983779 - 2983726 - G 70 -2.5 -4.63218 | gap 2, opp_overlap 2983741, overlap 2983728 2983741 CGCCGCCGAATAAAA CAGC-TACCCAGAA-AAGGAGTCGC ATGACG GCTACTCCTTCTTCAGGGCATGCAA CGCGCCGAGGCTCTC TERM 2177 2983762 - 2983741 - G 73 -5.8 -4.431 | opp_overlap 2983741, overlap 2983728 2983726 CAGCTACCCAGAAAA GGAGTCGC ATGACG GCTACTCC TTCTTCAGGGCATGC Rmet_2748 2985837 - 2983756 - | bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase TERM 2178 2984128 - 2984176 + g 74 -11.6 -3.65046 | gap 1, opp_overlap 2984114 ATTGCCACCCGTCGC GCTGGCAGCCGCGGGCGTCGAGG CGCC CTTCGGCGCGGCCGG-TGCCGGC TTGTTGCCCTCGCCA TERM 2179 2985579 - 2985600 + g 70 -13.7 -2.58544 | gap 1, overlap 2985578 CCGGCACGCTTTCCG GCCACCGGGC TCC GCCCGG-GGC GTTCTGGACCTGAGC hemC 2986852 - 2985848 - | porphobilinogen deaminase TERM 2180 2985903 - 2985880 - G 72 -11.6 -3.53811 | CGGAGTCCGTGGAAA GCGCGGCCAG CACG CCGTCCGCGC CCTGGGCCAGCAGAT TERM 2181 2987921 - 2987948 + G 72 -13.4 -3.15544 | gap 1, opp_overlap 2987920 GCGCCGTTCCAAGAC CGGCGCCA-CGCC CGC GCCGCTGGCGCCG TTCCTGCAGATGGGC TERM 2182 2988377 - 2988408 + G 80 -14.5 -3.09492 | GGCGTTGGCGCGCGG CCGCG-TCGACGCGC TGGT GCGCG-CGATCGCGG TCTTCGGCTTCCACC Rmet_2750 2986977 - 2990006 + | phosphoenolpyruvate carboxylase TERM 2183 2990192 - 2990208 + F 73 -8.7 -3.92659 | overlap 2990185 2990193 AGTTCTGCCCGCCGC TGGCGAT ATA ATCGCCG TTTCCGTTTTCCCGC Rmet_2751 2990235 - 2991644 + | argininosuccinate lyase TERM 2184 2991697 - 2991673 - f 100 -13.6 -5.00616 | gap 1, opp_overlap 2991673 CTCTGTCGTAAAAAA GCCGCTGTGCC GTCA GGC-CAGCGGC TTTTTTGTTTCCCGT TERM 2185 2991673 - 2991697 + F 100 -13.6 -5.64421 | gap 1, opp_overlap 2991673 CTCTGTCGTAAAAAA GCCGCTGTGCC GTCA GGC-CAGCGGC TTTTTTGTTTCCCGT Rmet_2752 2991852 - 2992394 + | tripartite ATP-independent periplasmic transporter DctQ Rmet_2753 2992394 - 2994118 + | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 2186 2994194 - 2994216 + T 100 -12.7 -5.30616 | gap 1, opp_overlap 2994194 GCAAGACACAAAAAA CCCCCG-GCC TCAC GGCACGGGGG TTTTTGTTTGGATCG TERM 2187 2994216 - 2994194 - T 100 -12.7 -5.47431 | gap 1, opp_overlap 2994194 GCAAGACACAAAAAA CCCCCG-GCC TCAC GGCACGGGGG TTTTTGTTTGGATCG Rmet_2754 2996518 - 2994254 - | ornithine decarboxylase dcd 2997244 - 2996678 - | deoxycytidine triphosphate deaminase Rmet_2756 2998204 - 2997368 - | formate dehydrogenase, subunit FdhD Rmet_2757 2998842 - 2998267 - | superoxide dismutase, copper/zinc binding Rmet_2758 3000133 - 2998940 - | formate dehydrogenase gamma subunit Rmet_2759 3000386 - 3000153 - | putative lipoprotein Rmet_2760 3001063 - 3000383 - | 4Fe-4S ferredoxin, iron-sulfur binding Rmet_2761 3004155 - 3001078 - | twin-arginine translocation pathway signal TERM 2188 3004218 - 3004193 - R 81 -13.9 -3.28712 | TGGCGTGTGCGACAA CTCGGGCGCGC GCCA GCACGCCCGGG GCAACATGCCTAAAC Rmet_2762 3004443 - 3004228 - | twin-arginine translocation pathway signal TERM 2189 3004403 - 3004365 - G 83 -15.3 -3.28712 | overlap 3004366 CGCGCGTGGCCACAA CGGC-GGCGCCGGCTGCGG CAA CCAC-GCCGGCACCCGCCA GAAAGGTGCGACGTG TERM 2190 3004402 - 3004366 - G 81 -16.6 -2.57132 | overlap 3004365 GCGCGTGGCCACAAC GGC-GGCGCCGGCTGCGG CAA CCAC-GCCGGCACCCGCC AGAAAGGTGCGACGT TERM 2191 3004419 - 3004431 + g 70 -5.5 -4.21607 | GAAAGGTGCGACGTG CGACC CGG GGTTG TTTATCTTCCATGAG Rmet_2763 3005237 - 3004584 - | cytoplasmic chaperone TorD Rmet_2764 3007463 - 3005283 - | 4Fe-4S ferredoxin, iron-sulfur binding TERM 2192 3005981 - 3006002 + g 72 -13 -3.14931 | opp_overlap 3005981 CCATCTGCTCAAGCA GCGCCGCA CGGTAT TGCGGCGC TTCGTCGCCAGTCAG Rmet_2765 3008175 - 3007567 - | proline rich protein Rmet_2766 3008721 - 3008185 - | hypothetical protein Rmet_2767 3009828 - 3008740 - | cobyrinic acid a,c-diamide synthase TERM 2193 3010017 - 3010068 + G 100 -8.7 -4.88407 | gap 1, overlap 3010020 CCTATTGTAGTGCGC CAATCTTGG-GATCCCGCGTGCCG ACAGG CGGTATGCGGGATCGTCCTGAGTG TTTTTGATTGCATCA Rmet_2768 3009933 - 3010817 + | OmpA/MotB TERM 2194 3010924 - 3010944 + F 100 -14 -5.77853 | opp_overlap 3010922 3010921 CCGTTGTGGAAAGCT GCGCCGGT GACTA ACCGGCGC TTTTTTTTGCCCATT metG 3011163 - 3013235 + | methionyl-tRNA synthetase Rmet_2770 3013911 - 3013309 - | putative lipoprotein Rmet_2771 3018086 - 3013908 - | hypothetical protein TERM 2195 3015572 - 3015554 - G 74 -11.6 -3.6682 | opp_overlap 3015555 3015556 CCGCATTGACCGAAA CGTCGCCG CTG CGGCGGCG GATTTCGGCAAACCC Rmet_2772 3020176 - 3018086 - | surface antigen (D15) Rmet_2773 3020383 - 3021288 + | condensin subunit ScpA panC 3021450 - 3022292 + | pantoate--beta-alanine ligase TERM 2196 3022338 - 3022358 + T 100 -9.7 -4.99435 | opp_overlap 3022338, overlap 3022332 CCCGCAACAAAAAAA GCCTGCG CACTTGC CGCAGGC TTTTTGCTTCTTGAA TERM 2197 3022358 - 3022338 - T 100 -9.7 -5.7946 | opp_overlap 3022332 3022338 CCCGCAACAAAAAAA GCCTGCG CACTTGC CGCAGGC TTTTTGCTTCTTGAA Rmet_2775 3023578 - 3022397 - | PepSY-associated TM helix TERM 2198 3023258 - 3023276 + g 79 -11.6 -3.90318 | CTGGCGGAAGCGTCC GGGGCCGG CCT CGGGCCCC TTTATCGGGTAGTAC TERM 2199 3023412 - 3023450 + g 70 -11.1 -3.40299 | gap 2 CCCACCGGGATGCGT GTGGC-GGATACGG-CCTG CAG CAGGTCCGGATTCAGCCAC TTGTCGATCTCGTCA TERM 2200 3024106 - 3024081 - g 71 -13.9 -2.78463 | opp_overlap 3024081 3024079 ATTGGGCCGACTACA CGGCGCGCCGG TGGC CCGGCAAGCCG CTGTTCCTGTACGTG Rmet_2776 3023714 - 3024289 + | GCN5-related N-acetyltransferase Rmet_2777 3024923 - 3024261 - | cobyrinic acid a,c-diamide synthase Rmet_2778 3026569 - 3025052 - | cobyric acid synthase TERM 2201 3025314 - 3025292 - G 81 -17 -2.53263 | GTCACCCTCAAGCCA CAGCGCTGGC CGG GCCAGCGCCG GGCCCTCGGTAACCC Rmet_2779 3026729 - 3027373 + | adenosylcobinamide kinase TERM 2202 3027523 - 3027550 + G 75 -14.8 -2.75064 | overlap 3027519 AATCGTCCCGAACGT GGCGCGCTACGC CAGC GCGTGGCGGGCC TGATTGCGTGGGCGG cobD 3027370 - 3028350 + | cobalamin biosynthesis protein Rmet_2781 3028347 - 3029378 + | putative threonine-phosphate decarboxylase Rmet_2782 3029385 - 3030287 + | periplasmic binding protein Rmet_2783 3030885 - 3030298 - | phosphoglycerate mutase cobS 3031649 - 3030870 - | cobalamin synthase cobT 3032736 - 3031666 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Rmet_2786 3033389 - 3032760 - | cob(I)yrinic acid a,c-diamide adenosyltransferase Rmet_2787 3034195 - 3033386 - | ABC transporter-related protein Rmet_2788 3035199 - 3034192 - | transport system permease protein Rmet_2789 3037314 - 3035218 - | TonB-dependent receptor, plug TERM 2203 3037163 - 3037149 - G 72 -3.4 -4.66163 | overlap 3037150 3037151 ATGCGGACGGAAAAA GGGCGA TGG CCGCCA GGATGGCGGGCATGG Rmet_2790 3037780 - 3038100 + | hypothetical protein Rmet_2791 3038097 - 3038420 + | hypothetical protein TERM 2204 3039008 - 3038983 - f 95 -14.8 -4.09685 | opp_overlap 3038973 3038983 GGGGACCCCCTAAAA GGCGGTGGTT TGATAG AACCACCGCC TTTTTCTTTGACTGC TERM 2205 3038983 - 3039008 + F 100 -15.5 -5.30616 | opp_overlap 3038983, overlap 3038973 GGGGACCCCCTAAAA GGCGGTGGTTT GATA GAACCACCGCC TTTTTCTTTGACTGC Rmet_2792 3039050 - 3039529 + | hypothetical protein TERM 2206 3039555 - 3039530 - f 72 -11.1 -3.40639 | overlap 3039545 AAGCTGATGAAGTAA GCACCGCCGCA GCAA TGCGGCACTGC GCGTCCAGCAACACT Rmet_2793 3039713 - 3040402 + | hypothetical protein Rmet_2794 3042029 - 3040476 - | malonyl-CoA synthase Rmet_2795 3042927 - 3042145 - | enoyl-CoA hydratase/isomerase TERM 2207 3042210 - 3042184 - G 93 -15.8 -3.85698 | CCGGTGCGCCAGAAA CGCGGCCACGCC CTC GGCATGGTCGCG ACTGGTGGCGTAACG TERM 2208 3042276 - 3042292 + g 74 -10.1 -3.71848 | overlap 3042237 TGGGATCTGGCGACA GGCGACG AAT CGTCGTC TTGTTGATGCGGGCC Rmet_2796 3043937 - 3042927 - | hypothetical protein Rmet_2797 3045478 - 3044057 - | malonyl-CoA decarboxylase TERM 2209 3044271 - 3044246 - G 74 -11.1 -3.59979 | gap 1 GTTGCCGAGGTGAAA GCGCGC-CACCG GAT CGGCGGGCACGC CCTTGCCACCCTCTC TERM 2210 3045145 - 3045101 - G 74 -12.8 -3.28924 | gap 2, overlap 3045102 CAGCGCCTGCGACAA GCCGGACGCGGTAGCCGGCTGG CCG CCAGCCG-C-ATCGCGGACGGC GGCCACCTCGGCCAG Rmet_2798 3046221 - 3045520 - | GntR family transcriptional regulator TERM 2211 3045594 - 3045623 + g 73 -5.5 -4.41895 | overlap 3045595 3045603 CACGATCCAGCGCGC TCAACGCGCCGCG CTGG CGCAGCACGTGGG TTTTCATTAGCGCTT Rmet_2799 3046638 - 3046327 - | hypothetical protein Rmet_2800 3047013 - 3048083 + | hypothetical protein Rmet_2801 3048118 - 3049143 + | peptidase M48, Ste24p Rmet_2802 3050024 - 3049212 - | prolipoprotein diacylglyceryl transferase Rmet_2803 3051027 - 3050077 - | LysR family transcriptional regulator Rmet_2804 3051158 - 3052831 + | dihydroxy-acid dehydratase TERM 2212 3052857 - 3052892 + T 87 -17.1 -3.06183 | gap 1, opp_overlap 3052845 3052863, overlap 3052863 GTAGCCCCCTGCAAT GC-AAAAGGCCTGCGA GTCCA TCGCAGGCCTTTTTGC TTGGGTGCCGATACC TERM 2213 3052885 - 3052863 - T 100 -14.9 -4.27316 | opp_overlap 3052857 3052863, overlap 3052845 CCCTGCAATGCAAAA GGCCTGCGA GTCCA TCGCAGGCC TTTTTGCTTGGGTGC TERM 2214 3052863 - 3052885 + T 100 -14.9 -4.88407 | opp_overlap 3052845 3052863, overlap 3052857 CCCTGCAATGCAAAA GGCCTGCGA GTCCA TCGCAGGCC TTTTTGCTTGGGTGC Rmet_2805 3053447 - 3052935 - | hypothetical protein Rmet_2806 3053878 - 3053444 - | DNA polymerase III subunit chi Rmet_2807 3055456 - 3053924 - | leucyl aminopeptidase TERM 2215 3054731 - 3054713 - G 73 -12.4 -3.35813 | opp_overlap 3054723 3054725 GGTCACGGCAAGGAA GGCGCCCA TGT TGAGCGCC TCGATCTGCTTGCGA Rmet_2808 3055621 - 3056739 + | permease YjgP/YjgQ Rmet_2809 3056736 - 3057899 + | permease YjgP/YjgQ TERM 2216 3057933 - 3057966 + G 80 -16.7 -2.52543 | gap 1, opp_overlap 3057921 3057920 AAGGGCTCATCCTGT TCGGGCACGGCGCGCG CGA CGCGCGCTG-GCGCGA TCCGTTCGACCGGCT Rmet_2810 3057902 - 3058306 + | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2217 3058349 - 3058329 - T 100 -12.6 -4.89729 | opp_overlap 3058329 CACAAAATGCAAAAA GGCCAGAG TCAAT CTCTGGCC TTTTTTCCACCGGGC TERM 2218 3058329 - 3058349 + T 100 -12.6 -5.00616 | opp_overlap 3058329 CACAAAATGCAAAAA GGCCAGAG TCAAT CTCTGGCC TTTTTTCCACCGGGC Rmet_2811 3059136 - 3058372 - | uroporphyrin-III C-methyltransferase Rmet_2812 3060480 - 3059176 - | sulfate adenylyltransferase subunit 1 TERM 2219 3060509 - 3060520 + r 83 -4.4 -5.03145 | overlap 3060495 TGCTGCGTCGATTTA GAAG TAGC CTTC TTTTTTCCGGCGTTC Rmet_2813 3061477 - 3060506 - | sulfate adenylyltransferase subunit 2 Rmet_2814 3062304 - 3061504 - | phosphoadenosine phosphosulfate reductase Rmet_2815 3062876 - 3062301 - | hypothetical protein TERM 2220 3062593 - 3062560 - G 78 -10.1 -3.96624 | overlap 3062547 TAGGCCGACGAGAAA CCGCGGCCATCGCGG AACA CCGGGAAGTCCACGG CCACGACCGATACGC Rmet_2816 3064577 - 3062895 - | sulfite reductase (NADPH) beta subunit TERM 2221 3063401 - 3063417 + g 72 -3.6 -4.62069 | TCGCGTCTTCCCACA GCGCGA ACAGG TCACGC TTTTTCACATCGGGC TERM 2222 3064290 - 3064308 + g 73 -11.8 -3.30124 | CACGCGCTCCAGATC CATCCAGT TGT ACTGGATG TTCTGGCGCGTGGAG Rmet_2817 3065459 - 3064686 - | hypothetical protein TERM 2223 3064903 - 3064919 + g 75 -10.8 -3.83502 | TAGGCGATATCGGTA CCGGCC ACTTC GGCCGG TTTCATATGGGGATA Rmet_2818 3065632 - 3066573 + | transcriptional regulator CysB-like protein Rmet_2819 3066604 - 3067743 + | methyltransferase small Rmet_2820 3067829 - 3068998 + | extracellular ligand-binding receptor Rmet_2821 3069020 - 3069889 + | 6-phosphogluconate dehydrogenase, NAD-binding Rmet_2822 3070890 - 3069949 - | hypothetical protein Rmet_2823 3070990 - 3071352 + | hypothetical protein Rmet_2824 3071962 - 3072240 + | hypothetical protein TERM 2224 3072745 - 3072730 - g 71 -10.4 -3.56325 | CGGCCACAAGCACAA GCGGTG AGTC CACCGC ACTCCATCATCACAG Rmet_2825 3072237 - 3073226 + | plasmid encoded RepA protein Rmet_2826 3073223 - 3073552 + | hypothetical protein TERM 2225 3075485 - 3075518 + G 79 -2.3 -5.04385 | overlap 3075492 GTTGCAGTTCCTGTC GGGCATGGTGACCAC AATC GTGATCGCTTTGTTC TTTTTTGGAGCTGTG TERM 2226 3075492 - 3075511 + G 78 -4.2 -4.84182 | overlap 3075485 TTCCTGTCGGGCATG GTGACCAC AATC GTGATCGC TTTGTTCTTTTTTGG Rmet_2827 3073902 - 3076157 + | putative TraY/DotA-like type IV secretion system protein Rmet_2828 3077700 - 3076276 - | hypothetical protein Rmet_2829 3077715 - 3078089 + | hypothetical protein TERM 2227 3078763 - 3078735 - g 70 -7.5 -4.011 | gap 1 GGAAGACCTAAAGAA TGCCG-TGCTCG CCGCGT CGAGCATCGACA GCTACGGCGAATGGA TERM 2228 3078777 - 3078801 + G 77 -4.9 -4.62085 | overlap 3078771 CAGCTACGGCGAATG GATCTTCGTTC TGC GCACGATGGTC TTCTTTTTTGAGGAT Rmet_2830 3078310 - 3080340 + | hypothetical protein TERM 2229 3080363 - 3080389 + G 88 -15.9 -3.34013 | opp_overlap 3080363 3080368 GACTCGCTGGAAGCA CGCAAGCGCCC TATTC GGGTGCTTGCG TTGCTTGAAGCGCTG TERM 2230 3080389 - 3080363 - g 71 -13.7 -2.71144 | opp_overlap 3080363, overlap 3080368 GACTCGCTGGAAGCA CGCAAGCGCCC TATTC GGGTGCTTGCG TTGCTTGAAGCGCTG Rmet_2831 3080324 - 3080989 + | hypothetical protein TERM 2231 3081332 - 3081342 + G 72 -8.2 -4.19704 | overlap 3081337 3081338 GGAGTATGTAGGCGA CGCC AAC GGCG TTTTCGATCGCATTG Rmet_2832 3080979 - 3082142 + | hypothetical protein Rmet_2833 3082189 - 3082692 + | hypothetical protein TERM 2232 3082841 - 3082879 + T 72 -13.3 -2.60555 | overlap 3082854 CTCTCTATCTCAACC GG-TTCCCGGGAAGCTCCG CTT CGGGG-TTCTCGGGAAGCC TCAGTTCTGACGTTG Rmet_2834 3084155 - 3082830 - | hypothetical protein TERM 2233 3083521 - 3083543 + g 84 -17.8 -2.78384 | GCGATCATGTCATCC GTGGTCGGCT CAT AGCCGACCAC TCTGATGCCCAGGAG TERM 2234 3084250 - 3084272 + r 91 -19.2 -3.18264 | opp_overlap 3084250 3084253, overlap 3084253 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2235 3084272 - 3084250 - R 90 -19.2 -3.07816 | opp_overlap 3084250 3084253, overlap 3084253 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2236 3084269 - 3084253 - R 90 -15.1 -3.68569 | opp_overlap 3084250 3084253, overlap 3084250 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 2237 3084253 - 3084269 + r 93 -15.1 -3.73647 | opp_overlap 3084253 3084250, overlap 3084250 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_2835 3084496 - 3084281 - | hypothetical protein Rmet_2836 3085383 - 3084550 - | ATPase Rmet_2837 3086819 - 3085380 - | integrase catalytic subunit Rmet_2838 3087500 - 3086931 - | hypothetical protein Rmet_2839 3088193 - 3087567 - | hypothetical protein Rmet_2840 3088540 - 3088190 - | hypothetical protein TERM 2238 3088589 - 3088559 - H 78 -6.6 -4.65168 | overlap 3088575 ATCAGACTCCAAAAA GGCCGGGGGGAGCG AAG CGTCCCGGCCAGCC CGCCGCAGGCGCAAG TERM 2239 3088609 - 3088645 + H 70 -10.1 -3.43944 | opp_overlap 3088609 GCAGGCGCAAGGGAA CTGTGGATGGAGCCTGC ATA GCAGGCGTAATACACAG TTATACCTTGCTGCT Rmet_2841 3088866 - 3089138 + | hypothetical protein TERM 2240 3089220 - 3089191 - T 91 -8.5 -4.84274 | gap 1, overlap 3089193 GAAGTACATCAAAAA GC-GACCGAGGCCG CTT CGGCGTGGGTCCGC TGCGGGTCAGGGAGT Rmet_2842 3090516 - 3089497 - | integrase catalytic subunit TERM 2241 3090409 - 3090447 + g 70 -10.9 -3.42056 | gap 1, overlap 3090411 3090412 CAGTGTCGAAGGCGC GCGGCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GACATC TTCTGCCTTCCAAAT TERM 2242 3090411 - 3090445 + g 71 -12.1 -3.281 | gap 1, overlap 3090409 3090412 GTGTCGAAGGCGCGC GGCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GACA TCTTCTGCCTTCCAA TERM 2243 3090412 - 3090444 + g 77 -15.6 -2.56539 | gap 1, overlap 3090411 3090409 TGTCGAAGGCGCGCG GCCAAGCCTGCGGGC CATG GCCCGCAGGCT-GAC ATCTTCTGCCTTCCA TERM 2244 3091513 - 3091546 + H 72 -10.9 -3.28712 | CCCCGGCCAGCGAGC CGGGGCTGTCCACGC GCAA GTGTGGGCAGCGCAG TTGTGCACGGGCGGG TERM 2245 3092468 - 3092432 - H 93 -16 -3.55761 | gap 1, overlap 3092433 CAGCTAGTTTTGAAA GC-GGTCTGTGCCAGGC GGCT ACCTGGCACAGACCTAC CACAACCCACCTGTA TERM 2246 3092466 - 3092433 - H 84 -17.5 -2.73243 | overlap 3092432 AGCTAGTTTTGAAAG CGGTCTGTGCCAGGC GGCT ACCTGGCACAGACCT ACCACAACCCACCTG Rmet_2843 3092497 - 3092754 + | hypothetical protein TERM 2247 3094141 - 3094155 + G 71 -10 -3.58343 | overlap 3094131 ACCGTCGCCGGGCGC TACCGC TCC GCGGTA TTTCGGCATGGTCGG Rmet_2844 3093805 - 3094497 + | hypothetical protein Rmet_2845 3094615 - 3094773 + | hypothetical protein Rmet_2846 3095672 - 3095088 - | exonuclease Rmet_2847 3096769 - 3095669 - | phage integrase Rmet_2848 3097218 - 3096820 - | hypothetical protein Rmet_2849 3097335 - 3098084 + | peptidase M48, Ste24p TERM 2248 3098198 - 3098148 - T 89 -16.9 -3.12999 | gap 1, opp_overlap 3098107, overlap 3098191 3098193 3098194 GTACGGCATATTGAA CCGCTGGCCCCCGCTCCTCTCCCG CAAG CGGGAGAGGAACGAACACC-GCAG GCGCATCAGCGCGCT Rmet_2850 3099019 - 3098204 - | N-formylglutamate amidohydrolase Rmet_2851 3100478 - 3099069 - | N-formimino-L-glutamate deiminase TERM 2249 3099845 - 3099879 + g 79 -10 -4.07568 | gap 1, opp_overlap 3099829, overlap 3099845 GCGGCGCGAGGCCGA G-TCGCGCCCCATAG GCCGCG CAGTGGGGCGCGAGC TTTTCCAGCAGCGCC Rmet_2852 3101722 - 3100475 - | imidazolonepropionase Rmet_2853 3102294 - 3101719 - | hypothetical protein Rmet_2854 3103997 - 3102291 - | urocanate hydratase Rmet_2855 3105634 - 3104066 - | histidine ammonia-lyase TERM 2250 3105739 - 3105703 - R 81 -8 -4.62336 | gap 1, overlap 3105706 AGGTTAGTCGAAAAA TAAGCCCGATGACCAGC TGTT GCTGGCC-TCAGGCGCA AATATCAGCCGAAGG TERM 2251 3105736 - 3105706 - R 93 -11.9 -4.42748 | gap 1, overlap 3105703 TTAGTCGAAAAATAA GCCCGATGACCAGC TGTT GCTGGCC-TCAGGC GCAAATATCAGCCGA TERM 2252 3105770 - 3105747 - R 70 -12.4 -2.84801 | overlap 3105744 CAGGCGCAAATATCA GCCGAAGGCA GGAT TGCCGTCGGC ACGGAAGCGGCTGCC Rmet_2856 3106511 - 3105744 - | histidine utilization repressor Rmet_2857 3107295 - 3106516 - | ABC transporter-related protein Rmet_2858 3108167 - 3107292 - | binding-protein-dependent transport systems inner membrane component Rmet_2859 3109137 - 3108184 - | substrate-binding region of ABC-type glycine betaine transport system TERM 2253 3109358 - 3109307 - R 77 -8.6 -4.33153 | overlap 3109309 CGGAATACCAATAAA TATGCGCGATAGCGGTGCGCCG GGATGCTG CGGCGCACCGTTGCCGATCACA TCCGGATCCACTGGG TERM 2254 3109356 - 3109309 - R 71 -9 -3.76167 | overlap 3109307 GAATACCAATAAATA TGCGCGATAGCGGTGCGCCG GGATGCTG CGGCGCACCGTTGCCGATCA CATCCGGATCCACTG Rmet_2860 3110462 - 3109467 - | NAD-dependent epimerase/dehydratase TERM 2255 3109934 - 3109903 - G 81 -13.6 -3.53012 | overlap 3109873 GCGTCGCGGCCGAAA CGCCGCACCGCCGC CTCC GCGGCGACCCGACG GCGCGCACGCGCGGT TERM 2256 3110300 - 3110327 + g 74 -11.2 -3.56593 | gap 1 CCACCAGCGGCACCG CGCC-GGCTGCGC GAA GCTCGGCCCGGCG TTCTGGTTGTGAAGT Rmet_2861 3110503 - 3111558 + | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 2257 3111760 - 3111792 + F 93 -16.4 -3.67443 | opp_overlap 3111766, overlap 3111766 AGCGTCTGTTCAGGT CAACAAGCCACGGG CAATC CCCGTGGCTTTTTG CTTTTTTCGACTTTT TERM 2258 3111786 - 3111766 - f 88 -14 -3.65046 | opp_overlap 3111760 3111766 TGTTCAGGTCAACAA GCCACGGG CAATC CCCGTGGC TTTTTGCTTTTTTCG TERM 2259 3111766 - 3111786 + F 100 -14 -5.25735 | opp_overlap 3111766, overlap 3111760 TGTTCAGGTCAACAA GCCACGGG CAATC CCCGTGGC TTTTTGCTTTTTTCG argD 3111836 - 3113023 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 2260 3113046 - 3113065 + T 100 -13.6 -5.63517 | opp_overlap 3113046 CCATGCAATGAAAAA TGCCTCGC TTTC GCGAGGCA TTTTTTGTTTGAAGC TERM 2261 3113065 - 3113046 - T 100 -13.6 -4.88407 | opp_overlap 3113046 CCATGCAATGAAAAA TGCCTCGC TTTC GCGAGGCA TTTTTTGTTTGAAGC Rmet_2863 3113852 - 3113136 - | ABC transporter-related protein Rmet_2864 3114645 - 3113869 - | ABC transporter-related protein Rmet_2865 3115813 - 3114659 - | inner-membrane translocator Rmet_2866 3116762 - 3115827 - | inner-membrane translocator TERM 2262 3116958 - 3116925 - R 100 -18.3 -4.8048 | opp_overlap 3116928 TGGCGAGACTAAAAA GAACGGCACCGTAAA AGTG CTCACGGTGCCGTTC GTCCGGGCTGGTAAG Rmet_2867 3118185 - 3116980 - | extracellular ligand-binding receptor TERM 2263 3118091 - 3118105 + g 87 -5.6 -5.08731 | GCGGGTGCCGGTGCG GCCGAT TCA ACCGGC TTTTCTTCTTTCTTG TERM 2264 3118240 - 3118224 - R 72 -2.2 -4.7268 | overlap 3118226 AAACAGGGAATAAAA CACGCC TCCCG GACGTA TTCCCCGAACCGCCT TERM 2265 3118594 - 3118581 - R 71 -5.9 -4.35581 | opp_overlap 3118574 3118572 3118570, overlap 3118574 CCAAAATAGGGAAAA CCCCA GCAT CGGGG ATTACCCTGTATTGT ispH 3119852 - 3118860 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rmet_2869 3120370 - 3119852 - | peptidylprolyl isomerase, FKBP-type TERM 2266 3119942 - 3119923 - G 75 -7 -4.35524 | opp_overlap 3119923 3119933 GGTTGAAATCGAAAA GCGCGGCG GTCT CGCCGTAC TCCTTGAGCACGCCG TERM 2267 3120956 - 3120912 - g 88 -10.6 -4.33417 | gap 1, opp_overlap 3120912 3120914, overlap 3120916 CTGATCGACAAGAAA GGCATCGACGCCGTGCTCGCA GACC TGCGCGCACG-CGGCGAAGTC TAATTAGGAGTACAC rpmB 3120726 - 3120959 + | 50S ribosomal protein L28 rpmG 3120973 - 3121143 + | 50S ribosomal protein L33 TERM 2268 3121162 - 3121191 + F 95 -16.5 -3.85817 | opp_overlap 3121168, overlap 3121168 ATCTACGGTCTTCAG CCAAAAGCCCCGC ACTA GCGGGGCTTTTTG TTTCTGGGCGGCCGT TERM 2269 3121168 - 3121185 + F 100 -14.1 -5.38054 | opp_overlap 3121168, overlap 3121162 GGTCTTCAGCCAAAA GCCCCGC ACTA GCGGGGC TTTTTGTTTCTGGGC TERM 2270 3121185 - 3121168 - f 100 -14.1 -4.18018 | opp_overlap 3121168 3121162 GGTCTTCAGCCAAAA GCCCCGC ACTA GCGGGGC TTTTTGTTTCTGGGC Rmet_2872 3121325 - 3122932 + | L-aspartate oxidase Rmet_2873 3123823 - 3122960 - | nicotinate-nucleotide pyrophosphorylase Rmet_2874 3124974 - 3123820 - | quinolinate synthetase TERM 2271 3125082 - 3125064 - R 100 -17.4 -5.10933 | opp_overlap 3125064 TTAGCCAAAAGAAAA GCCCCGCC TGG GGCGGGGC TTTGTAGCCATGACG TERM 2272 3125064 - 3125082 + r 100 -17.4 -3.87815 | opp_overlap 3125064 TTAGCCAAAAGAAAA GCCCCGCC TGG GGCGGGGC TTTGTAGCCATGACG Rmet_2875 3126354 - 3125116 - | fatty acid desaturase TERM 2273 3126548 - 3126564 + r 76 -5.8 -4.58685 | TTCTACCGGATCGAC GCGGGT CAGAC ATCCGC TTTTTCCCCGACTTT Rmet_2876 3127972 - 3126602 - | MscS mechanosensitive ion channel TERM 2274 3126936 - 3126959 + g 72 -8.2 -4.14739 | overlap 3126937 3126939 CGGGTAGCCACGCGC ACATTCGTTC CAGA GAACGAATGG TTTTGCACTGACTGG Rmet_2877 3129372 - 3127972 - | Fmu (Sun) TERM 2275 3129278 - 3129230 - G 71 -9.4 -3.70902 | gap 2 TGTTGCAGATGGAAA GCCTGCAGGCCGCCGGGCGTGCGC GGC GCGC-CGTC-AGCGCCCTGCTGCC GGGCGTTGGGCGACT purN 3130031 - 3129369 - | phosphoribosylglycinamide formyltransferase TERM 2276 3129800 - 3129768 - G 72 -13.4 -3.15861 | overlap 3129744 CAGGATCCGCATGAA GCCTGCCAGCACGA TGAGG TCGGGCTGGTAGGC GTCGATGGCGTCCCG TERM 2277 3130331 - 3130286 - H 100 -18.5 -3.5882 | GATAGTATTTTTAAA GCCATAATCCTCATCCATCGA AGCT TCAATGGATGAGGGTGATGGC CAGAACACGCAAGAC Rmet_2879 3130318 - 3131526 + | IS4 family transposase Rmet_2880 3131733 - 3132392 + | two component LuxR family transcriptional regulator TERM 2278 3132461 - 3132404 - T 100 -23 -3.09878 | gap 1, opp_overlap 3132410 3132418 3132424, overlap 3132418 3132424 GTGAGGCAGTGAACA TCGCCACGCATGAATGACAACGCCGCC TCAAG GGCGGCGTTGTCATTCATGCGTT-CAT GCCGTGGGCAACCAG TERM 2279 3132410 - 3132456 + T 100 -34.8 -3.16564 | opp_overlap 3132404 3132418 3132424, overlap 3132418 3132424 CAGTGAACATCGCCA CGCATGAATGACAACGCCGCCT CAA GGGCGGCGTTGTCATTCATGCG TTCATGCCGTGGGCA TERM 2280 3132448 - 3132418 - T 100 -21.3 -3.18383 | opp_overlap 3132410 3132418 3132424, overlap 3132404 3132424 ATCGCCACGCATGAA TGACAACGCCGCC TCAAG GGCGGCGTTGTCA TTCATGCGTTCATGC TERM 2281 3132418 - 3132448 + T 100 -22 -3.22884 | opp_overlap 3132418 3132404 3132424, overlap 3132410 3132424 ATCGCCACGCATGAA TGACAACGCCGCCT CAA GGGCGGCGTTGTCA TTCATGCGTTCATGC TERM 2282 3132424 - 3132442 + T 86 -13.8 -3.54297 | opp_overlap 3132418 3132404 3132424, overlap 3132418 3132410 ACGCATGAATGACAA CGCCGCCT CAA GGGCGGCG TTGTCATTCATGCGT TERM 2283 3132442 - 3132424 - T 79 -13.1 -3.54297 | opp_overlap 3132424 3132418 3132410, overlap 3132418 3132404 ACGCATGAATGACAA CGCCGCC TCAAG GGCGGCG TTGTCATTCATGCGT Rmet_2881 3134356 - 3132458 - | periplasmic sensor hybrid histidine kinase TERM 2284 3134405 - 3134356 - R 72 -13.5 -2.62515 | opp_overlap 3134347 3134346 3134355 3134354 AAGTGGGGCATATCA TGCCGATTTTTGCGGCGCCGCGC CATT GCGAGGCGCCCCAATAACCCACA AATTTGTCAAAAGCA TERM 2285 3134668 - 3134651 - R 78 -10.5 -3.85698 | overlap 3134652 TCTTGCTTTGACAAA CCCGGCC GCAA GGCCGGA GCGAGTCCATGTGTT TERM 2286 3134742 - 3134784 + r 82 -12.1 -3.60098 | gap 1, overlap 3134744 3134746 CTGGATGGATTTCCA GCCA-TTGCCCAAAGGCGGG GACG CTTGCCTTTGGGCAGGTGTC TTTGCAGTACGCACT TERM 2287 3134744 - 3134782 + r 81 -13.3 -3.38046 | gap 1, overlap 3134742 3134746 GGATGGATTTCCAGC CA-TTGCCCAAAGGCGGG GACG CTTGCCTTTGGGCAGGTG TCTTTGCAGTACGCA TERM 2288 3134746 - 3134779 + r 78 -16.1 -2.55297 | overlap 3134744 3134742 ATGGATTTCCAGCCA TTGCCCAAAGGCGGG GACG CTTGCCTTTGGGCAG GTGTCTTTGCAGTAC Rmet_2882 3135440 - 3135081 - | hypothetical protein TERM 2289 3135618 - 3135637 + H 73 -10 -3.56959 | overlap 3135602 3135610 3135609 3135620 TCCCTTGGGGGGTGA TATGCCCC TCAA GGGGCATG TTGTCTCCGTTGTCT Rmet_2883 3135681 - 3137381 + | RNA-directed DNA polymerase Rmet_2884 3137460 - 3138488 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 2290 3140141 - 3140115 - g 70 -7.9 -3.9941 | gap 1, overlap 3140110 TCGTCCACAAGGAAA CGGGCGCCCTGC ATCC GC-GCACGCCCG AGCTGCTCGAGGAAG ileS 3138608 - 3141487 + | isoleucyl-tRNA synthetase Rmet_2886 3141487 - 3142023 + | signal peptidase II Rmet_2887 3142145 - 3143344 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Rmet_2888 3143363 - 3144382 + | luciferase-like protein Rmet_2889 3144487 - 3144981 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Rmet_2890 3145878 - 3145033 - | hypothetical protein Rmet_2891 3146897 - 3145893 - | hypothetical protein TERM 2291 3146964 - 3146941 - R 89 -4.4 -5.24129 | opp_overlap 3146945, overlap 3146945 CCGCGTGACAAAAAA GAAAGGGCGA CATG CCGCCCGCCC GTATTTTGCCCGATG TERM 2292 3146960 - 3146945 - R 93 -8.2 -5.13354 | opp_overlap 3146945, overlap 3146941 GTGACAAAAAAGAAA GGGCGA CATG CCGCCC GCCCGTATTTTGCCC TERM 2293 3147055 - 3147075 + r 89 -15.4 -3.40382 | opp_overlap 3147055, overlap 3147047 ATCGCCCAAGAAAAA CGGCCGGG AATGA CCCGGCCG TTATCCAATTTGCTG TERM 2294 3147075 - 3147055 - R 100 -15.4 -5.06816 | opp_overlap 3147055 3147047 ATCGCCCAAGAAAAA CGGCCGGG AATGA CCCGGCCG TTATCCAATTTGCTG Rmet_2892 3149401 - 3147104 - | ATP-dependent Clp protease ATP-binding subunit ClpA clpS 3149724 - 3149398 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2295 3149712 - 3149727 + g 84 -6.8 -4.77567 | GGGGGGTGTTCGCCA GCCGTG TCGC CATGGC TTTTATTCTAACCCT Rmet_2894 3150289 - 3150498 + | cold-shock DNA-binding protein family protein TERM 2296 3150648 - 3150674 + T 85 -17.3 -2.90813 | overlap 3150651 GCCACGCATCCGATG GAGCGCCCGGC CTCGT GCCGGGCGTTC TGCTTTCCGCCCCTC TERM 2297 3150651 - 3150671 + T 93 -15.4 -3.60151 | overlap 3150648 ACGCATCCGATGGAG CGCCCGGC CTCGT GCCGGGCG TTCTGCTTTCCGCCC TERM 2298 3150873 - 3150856 - T 100 -14.1 -4.6644 | opp_overlap 3150856 AATAGACGTGAAAAA GCCCCGC ATCT GCGGGGC TTTCTGTCTCCGGCG TERM 2299 3150856 - 3150873 + T 95 -14.1 -4.12532 | opp_overlap 3150856 AATAGACGTGAAAAA GCCCCGC ATCT GCGGGGC TTTCTGTCTCCGGCG Rmet_2895 3152154 - 3150904 - | isocitrate dehydrogenase Rmet_2896 3152393 - 3153037 + | ribosomal large subunit pseudouridine synthase E Rmet_2897 3153144 - 3153344 + | hypothetical protein TERM 2300 3153393 - 3153417 + F 100 -12.2 -5.4505 | gap 1 GGCGCTCATGCGAAG GGCAGGCACGT TTCG ACG-GCCTGCC TTTTTTATTGCGCGA TERM 2301 3153673 - 3153694 + G 75 -10.1 -3.82084 | opp_overlap 3153673 GATGTTCCGCAAGAA CATGCCAGC CAAC GCCGGCATG TTGTTCGTGTTCGAG TERM 2302 3153694 - 3153673 - g 77 -12.3 -3.61715 | opp_overlap 3153673 GATGTTCCGCAAGAA CATGCCAGC CAAC GCCGGCATG TTGTTCGTGTTCGAG Rmet_2898 3153458 - 3153940 + | hypothetical protein Rmet_2899 3154482 - 3153997 - | nucleotide-binding protein Rmet_2900 3154617 - 3155627 + | UDP-N-acetylmuramate dehydrogenase TERM 2303 3155641 - 3155667 + T 83 -16.6 -2.6063 | overlap 3155639 3155637 AGAGGGTGTCTTGCT CCCCTCTCCCAC GTT GTGGAAGAGGGG TAAATTCTCGGTACG Rmet_2901 3155996 - 3155685 - | hypothetical protein TERM 2304 3156068 - 3156050 - R 100 -9.5 -5.00616 | opp_overlap 3156050 GGTGGGCGTAAAAAA GGGAGCC TGGAC GGCCCCC TTTGATCAGCTCCGG Rmet_2902 3157014 - 3156091 - | ornithine carbamoyltransferase TERM 2305 3157152 - 3157209 + H 77 -14.8 -2.72043 | gap 3, overlap 3157129 3157152 CATAAGGGATTATTC CTG-CTTTGGCGAGCCCGGAGCGCCCGCC GGC GGCACGCGC-CCGGGC-CGCCATTGACAG GTTTCCGACAGGATT Rmet_2903 3157291 - 3157755 + | hypothetical protein TERM 2306 3157876 - 3157894 + T 100 -11 -5.60993 | opp_overlap 3157861 3157876 CCGAAAACAAAAAAA GCTCGTCG CAA TGACGAGC TTTTTTTGTACCACA TERM 2307 3157894 - 3157876 - T 100 -10.3 -6.09196 | opp_overlap 3157876, overlap 3157861 CCGAAAACAAAAAAA GCTCGTC GCAAT GACGAGC TTTTTTTGTACCACA rpsT 3158203 - 3157937 - | 30S ribosomal protein S20 TERM 2308 3158245 - 3158226 - H 70 -10 -3.41878 | gap 1 TTCCTGAATTCAGAA TGCG-CGCC CGG GGCGACGCA ACAAAATGGGACGCA Rmet_2905 3158538 - 3160142 + | integral membrane protein MviN Rmet_2906 3160156 - 3161004 + | hypothetical protein TERM 2309 3161058 - 3161042 - T 82 -15.1 -3.14132 | TGCTGCGCTCAGGAA GCGCGCG TAT CGCGCGC CTTGCCGCGCACCAA Rmet_2907 3161694 - 3161035 - | hypothetical protein mutL 3161819 - 3163786 + | DNA mismatch repair protein miaA 3163803 - 3164750 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2310 3165002 - 3165028 + G 75 -4.3 -4.63486 | opp_overlap 3165002 3165003 AAGTGGATACGGAAA GCGGCAAGCTG CCGGT CGGCTTCGCGC TTTTCTTCCACAACT Rmet_2910 3164815 - 3165306 + | GCN5-related N-acetyltransferase TERM 2311 3165331 - 3165350 + T 100 -10.6 -5.14163 | opp_overlap 3165332, overlap 3165332 CCCAGAAAACAAAAA ACCCGGCC TCTC GGCCGGGC TTTTTGTTGGTACGT TERM 2312 3165349 - 3165332 - T 100 -14.1 -5.86976 | opp_overlap 3165331 3165332 CCAGAAAACAAAAAA CCCGGCC TCTC GGCCGGG CTTTTTGTTGGTACG TERM 2313 3165332 - 3165349 + T 88 -14.1 -3.67413 | opp_overlap 3165332, overlap 3165331 CCAGAAAACAAAAAA CCCGGCC TCTC GGCCGGG CTTTTTGTTGGTACG Rmet_2911 3166430 - 3165378 - | phosphoribosylaminoimidazole synthetase Rmet_2912 3166623 - 3167330 + | hypothetical protein Rmet_2913 3167454 - 3168128 + | HAD family hydrolase TERM 2314 3168208 - 3168180 - g 71 -13.8 -2.70932 | opp_overlap 3168205 GCCGGGGCCCAAGCA GCGCCGCACTGG ACGCG CCCATGCGGCGC GCGTCGTCGGCGTTG TERM 2315 3169481 - 3169440 - g 70 -11.5 -3.31461 | gap 1, overlap 3169466 GACCGACTTCCAGAA CGCGC-CCCCCGATGAGCGC GAA GCGATGATCGAGGCCGCGCG CCCGGCCCGTTCCAG Rmet_2914 3168130 - 3169719 + | poly(A) polymerase Rmet_2915 3169721 - 3170242 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2316 3170254 - 3170222 - f 72 -12 -3.39895 | gap 1 TCGCGCATGAAGGAA GGCGACGGCGCGC GGCCATGA GCGCGCCA-CGCC GCGGCTGACACATGC Rmet_2916 3170266 - 3170907 + | deoxynucleoside kinase panB 3171044 - 3171865 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2317 3172129 - 3172155 + G 73 -12.2 -3.38812 | overlap 3172128 3172136 ACCTGCTGTTCACGC GCCAGGGGCCGC TGG GCGGCTTCTCGC TGTTGTTCACGCCCG Rmet_2918 3171873 - 3172571 + | binding-protein-dependent transport systems inner membrane component Rmet_2919 3172568 - 3173257 + | ABC transporter-related protein Rmet_2920 3175201 - 3173288 - | para-aminobenzoate synthase, component I TERM 2318 3175209 - 3175233 + r 93 -14.3 -3.81287 | opp_overlap 3175209 TTGGGCATAAAAAAA CCGGCCACG CTGGACA CGTGGCCGG TTTCATCGTCCTGTC TERM 2319 3175233 - 3175209 - R 100 -15 -5.60993 | opp_overlap 3175209 TTGGGCATAAAAAAA CCGGCCACGC TGGAC ACGTGGCCGG TTTCATCGTCCTGTC Rmet_2921 3176406 - 3175267 - | chaperone DnaJ TERM 2320 3176526 - 3176470 - R 100 -13.9 -5.32944 | gap 3, overlap 3176515 GCGATAAGCAAAAAA GCCGAGCG-CAG-TGTCCGAC-CGAGGT TTGC ACCTGGTGTCAGACAACCGTCGCCCGGC GTCGGGAACGGGTGG TERM 2321 3176528 - 3176580 + r 100 -22.1 -3.59882 | gap 2, opp_overlap 3176515, overlap 3176527 AACCGTCGCCCGGCG TCGGGA--ACGGGTGGCGGCGCCGG CATCA CCCGCGCCGCCACCCGCCGTCCCGA TTACTTCTTGTCGTT Rmet_2922 3178527 - 3176581 - | molecular chaperone DnaK TERM 2322 3176818 - 3176833 + g 74 -4.7 -4.48987 | overlap 3176791 GTCTTCCAGGTCCTT GATCG CGGCTT CGATC TTTTCCTTCTCGCCA Rmet_2923 3179244 - 3178690 - | ATP:cob(I)alamin adenosyltransferase Rmet_2924 3179334 - 3180821 + | FAD linked oxidase-like protein Rmet_2925 3180832 - 3181722 + | LysR family transcriptional regulator TERM 2323 3182709 - 3182677 - g 75 -4 -4.60487 | opp_overlap 3182685, overlap 3182678 3182679 GATGATGTGGAAAAA GGCGGCAATGCCGT GGCCG ACGTGATCGCCGCT GGCATTATCCCGGCC Rmet_2926 3181936 - 3183438 + | FAD linked oxidase-like protein Rmet_2927 3183491 - 3184414 + | Ion transport protein TERM 2324 3184666 - 3184710 + G 84 -13.6 -3.57144 | gap 2, opp_overlap 3184681 3184682, overlap 3184667 GGCCGAGATCGAGGA CGCGGTGGCGCAGAAGCGCCAG ATG CTGGC-CTTC-GAGCCGCCGCA TTTCGCGCTGCGCGG TERM 2325 3184667 - 3184709 + G 81 -17.1 -2.74144 | gap 2, opp_overlap 3184681 3184682, overlap 3184666 GCCGAGATCGAGGAC GCGGTGGCGCAGAAGCGCCAG ATG CTGGC-CTTC-GAGCCGCCGC ATTTCGCGCTGCGCG TERM 2326 3185269 - 3185233 - g 84 -13 -3.72576 | gap 1 CTTCTCCCCAGCAAA CGATACGG-GCCGCGCC CTGT GGCGCATCGCCGTACCG ACGGTCTGCAAGCCG glcE 3184448 - 3185551 + | glycolate oxidase FAD binding subunit glcF 3185602 - 3186873 + | glycolate oxidase iron-sulfur subunit Rmet_2930 3187010 - 3187396 + | LrgA TERM 2327 3187991 - 3187955 - g 90 -19.3 -2.78384 | GCGTGCGGGACTACA CGGTGCGCGGCTTCGCC ACG GGCGTGGCCGCGCACGG CATCGGCACGGCACG Rmet_2931 3187393 - 3188118 + | LrgB-like protein Rmet_2932 3188165 - 3188584 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2328 3188963 - 3188919 - g 76 -5.6 -4.56597 | opp_overlap 3188957 CCCTCGCTCGAAAAA CTGATGGCCGCCCTAC-CGCCG CAA CGGCGCGT-GGCCGCGCAGCAG AGCCGCATTTTCGCG Rmet_2933 3188604 - 3189296 + | helix-turn-helix, type 11 Rmet_2934 3189817 - 3189323 - | glutathione peroxidase Rmet_2935 3191018 - 3189873 - | twitching motility protein Rmet_2936 3192073 - 3191030 - | twitching motility protein TERM 2329 3192234 - 3192200 - g 71 -9.2 -3.78934 | gap 1, overlap 3192180 GCGGCTGCACAACAA GCCAGCCGGGAC-CC TTCCGG GGTGACCCTGCTGGC CGTCTCCAAGACCGT Rmet_2937 3192137 - 3192826 + | hypothetical protein Rmet_2938 3192912 - 3193733 + | pyrroline-5-carboxylate reductase TERM 2330 3193741 - 3193757 + T 100 -15.1 -4.3255 | opp_overlap 3193741 AGGACTAAGAAAAAA CCGGGGC CTG GCCCCGG TTTCTTACTTCAGCA TERM 2331 3193757 - 3193741 - T 100 -15.1 -5.52023 | opp_overlap 3193741 AGGACTAAGAAAAAA CCGGGGC CTG GCCCCGG TTTCTTACTTCAGCA ubiA 3194646 - 3193762 - | 4-hydroxybenzoate octaprenyltransferase TERM 2332 3194238 - 3194224 - G 72 -3.5 -4.59773 | CGGGATCGCGAAAAA CCGCT TGAAG AACGG ATAGGTTCCCGCCAG TERM 2333 3194708 - 3194680 - R 100 -11.6 -5.31519 | AGACTCAAACAAAAA CGCGCCGCGGCC AGTTG GACCGTGACGCG TTGGCCCGGTTGCCG Rmet_2940 3195246 - 3194761 - | Ferritin and Dps TERM 2334 3195599 - 3195643 + r 70 -13.1 -2.90075 | opp_overlap 3195603, overlap 3195588 GTATTAGGCGACTAT TGAATCGTCTATTCGATAAAT TTC ATATATCGAATAGACGATACC TATGCTTGCAGAAGG TERM 2335 3195639 - 3195603 - R 87 -16.9 -3.09834 | opp_overlap 3195588 3195599 TAGGCGACTATTGAA TCGTCTATTCGATAAAT TTC ATATATCGAATAGACGA TACCTATGCTTGCAG Rmet_2941 3196647 - 3195691 - | LysR family transcriptional regulator Rmet_2942 3198981 - 3196768 - | ATP-dependent DNA helicase RecG TERM 2336 3197578 - 3197592 + g 78 -4.2 -4.72272 | overlap 3197579 GGCCGACATCATGAG CTGGTG CGG CACCAC TTTTTCCTCCGCCGG queA 3199089 - 3200150 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 2337 3200431 - 3200447 + G 70 -5.7 -4.23434 | opp_overlap 3200425 TGGGACAAGCCGATC CTGACCG ATT CGGGCGG TTTTCAGGTGTTTTC tgt 3200170 - 3201300 + | queuine tRNA-ribosyltransferase yajC 3201520 - 3201846 + | preprotein translocase subunit YajC TERM 2338 3201915 - 3201971 + F 72 -10.9 -3.34517 | gap 2 ACCATGCCCTGCGCA GCCGCCT-G-AATCCGCACAGGGGTCC CGTCC GGACCCTCCTACGGGTTGCCAGGCGGC TGTTTGCCAACCGGT secD 3202051 - 3203916 + | preprotein translocase subunit SecD secF 3203941 - 3204915 + | preprotein translocase subunit SecF TERM 2339 3204934 - 3204963 + F 100 -19.5 -3.53444 | opp_overlap 3204941, overlap 3204941 GGCGCTCGGGTTGAA CGAAAAAGGCACC TTCG GGTGCCTTTTTCG TTTGGCGAGGAGTCC TERM 2340 3204956 - 3204941 - f 100 -10.4 -4.8622 | opp_overlap 3204934 3204941 GGGTTGAACGAAAAA GGCACC TTCG GGTGCC TTTTTCGTTTGGCGA TERM 2341 3204941 - 3204956 + F 100 -10.4 -4.98531 | opp_overlap 3204941, overlap 3204934 GGGTTGAACGAAAAA GGCACC TTCG GGTGCC TTTTTCGTTTGGCGA TERM 2342 3205670 - 3205640 - g 71 -9.7 -3.75153 | gap 1, overlap 3205623 GGCCCGGAAGCGAAA CGCCCCGGCT-ACG ACCT CGTCATCCAGGGCG AGGCCGGCCTCATGG Rmet_2948 3205205 - 3206455 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2343 3206636 - 3206606 - T 72 -13.4 -2.59797 | gap 1, opp_overlap 3206610, overlap 3206605 3206601 3206603 GTTGGAGAAAGACAT TCGATGACCGCGC CGGCTC GCGCGG-CATCGA TTCAGGCCCCCTCCC Rmet_2949 3207690 - 3206692 - | response regulator receiver domain-containing protein Rmet_2950 3208823 - 3207687 - | response regulator receiver sensor signal transduction histidine kinase TERM 2344 3207995 - 3207954 - G 72 -8.5 -3.99592 | gap 1, opp_overlap 3207954 3207953 AGCCACCACGACAAA GCGCAGCGACGGGTTGTCCA CAT CGGCCAGCGCG-CGCAGCGC ATTGCTCATCACCGA Rmet_2951 3210215 - 3208827 - | periplasmic sensor signal transduction histidine kinase Rmet_2952 3211656 - 3210187 - | MCP methyltransferase, CheR-type TERM 2345 3210785 - 3210770 - GR 71 -9 -3.72576 | opp_overlap 3210770 TGGCGCGTCAGGAAA TCGACC AGCA GGTCGA TTCGGTTGCGGTGCG TERM 2346 3211623 - 3211607 - GR 72 -3.5 -4.70879 | GGGAAATCCGAAAAA CGCTGCG CAC CGTGGCG CCAATGGGCACCGGC TERM 2347 3211891 - 3211869 - R 100 -13.5 -5.77853 | opp_overlap 3211872 AATCCCCAAAAAAAA TGAGCCAGC ACATG GCTGGCTCA TTCAGATGGGGCCGG Rmet_2953 3212535 - 3211945 - | YceI TERM 2348 3212290 - 3212308 + g 74 -13.2 -3.25823 | opp_overlap 3212289 3212288 3212292 GCCGTTACCGAAATC GATCGACG ACG CGTCGATC TTGATATCCACGGAG Rmet_2954 3213208 - 3212633 - | YceI Rmet_2955 3213809 - 3213243 - | cytochrome B561 TERM 2349 3214082 - 3214112 + r 91 -14.1 -3.73402 | opp_overlap 3214087, overlap 3214087 GCGACCGGCAACAAC AAAAAGGGCTGGC ACCAG GCCAGCCCTTTTG TTTCCTGACGCGTCT TERM 2350 3214087 - 3214107 + r 100 -14 -4.93877 | opp_overlap 3214087, overlap 3214082 CGGCAACAACAAAAA GGGCTGGC ACCAG GCCAGCCC TTTTGTTTCCTGACG TERM 2351 3214107 - 3214087 - R 100 -14 -5.29445 | opp_overlap 3214087 3214082 CGGCAACAACAAAAA GGGCTGGC ACCAG GCCAGCCC TTTTGTTTCCTGACG Rmet_2956 3215510 - 3214134 - | adenylosuccinate lyase TERM 2352 3215215 - 3215251 + g 72 -8.8 -3.95584 | gap 1 TCCTTGAGCCAGTAC TCGACGGCCTTCACG TCGTGGTT CGTGACGGCC-TCGA TTTCCTTGATCCGGG Rmet_2957 3215894 - 3216508 + | glutathione S-transferase-like protein TERM 2353 3216542 - 3216574 + T 100 -26.5 -3.18274 | CTGCATGTGATCTTG CACGGCGCTTCACAC CAG GTGTGAAGCGCCGTG TTGCATTCAGGTGCC trmU 3217696 - 3216617 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Rmet_2959 3218244 - 3217693 - | NUDIX hydrolase Rmet_2960 3219271 - 3218363 - | dihydrodipicolinate synthase Rmet_2961 3219578 - 3219258 - | hypothetical protein Rmet_2962 3220499 - 3219702 - | hypothetical protein TERM 2354 3220774 - 3220751 - g 100 -8.8 -5.01732 | AAGCTGCGCAAAAAA TGGTGCGCCG CACG CGGTACACCA AGGGCGAGGACGTCT Rmet_2963 3220750 - 3221955 + | alanine dehydrogenase/PNT-like protein TERM 2355 3222156 - 3222174 + G 72 -8.2 -3.96624 | opp_overlap 3222155 GATGGTTAACCACAC GGTGATCA ACC TGATCATC TTTGTGCTGGCGATC Rmet_2964 3222136 - 3222459 + | NAD/NADP transhydrogenase alpha subunit-like protein Rmet_2965 3222459 - 3223931 + | NAD(P) transhydrogenase, beta subunit TERM 2356 3224018 - 3224040 + F 100 -13.4 -4.20136 | opp_overlap 3224008 3224012 GAAATCGAACGAGTG CGGCCGGC AACCAAC GCCGGCCG TTTCGTTTTCCGGAT Rmet_2966 3224148 - 3225197 + | response regulator receiver domain-containing protein Rmet_2967 3226529 - 3225270 - | putative RNA methylase TERM 2357 3226572 - 3226555 - R 100 -12.7 -5.27335 | TCCTGCAAACAAAAA CGTCCGC CATG GCGGACG GAAGGTATCGGTGAC Rmet_2968 3227203 - 3226598 - | DSBA oxidoreductase Rmet_2969 3227661 - 3227239 - | hypothetical protein proA 3228960 - 3227680 - | gamma-glutamyl phosphate reductase TERM 2358 3229011 - 3229032 + r 73 -9.3 -3.89572 | overlap 3229007 3229012 TGCCGCGATGTCGAT GCGCCGGCG CGGC TGCCGGCGA TTGTTCTGGTTCGGT TERM 2359 3229012 - 3229031 + r 70 -12.8 -2.9302 | overlap 3229011 3229007 GCCGCGATGTCGATG CGCCGGCG CGGC TGCCGGCG ATTGTTCTGGTTCGG holA 3230157 - 3229087 - | DNA polymerase III subunit delta TERM 2360 3229600 - 3229563 - G 81 -12.5 -3.85698 | CGCCGGGCGGATAAA GCAGGCCGAGCTTCTGG ATTT CCTGATGCGCGGCCAGC AGGTTGCCCTCGACC TERM 2361 3230119 - 3230091 - G 84 -13.2 -3.71527 | CGTGAACGACGTAAA GC-GGCGCCAGGCC CTT GGCCTG-CGCCTGC CTCAGATGTGCCTCG Rmet_2972 3230724 - 3230209 - | rare lipoprotein B leuS 3233382 - 3230761 - | leucyl-tRNA synthetase TERM 2362 3233493 - 3233472 - R 79 -13 -3.46965 | overlap 3233463 AAGAGACGATTATAA CCGTGGCG TATGTC CGCCACGG CTCGCACGGAAAGGC Rmet_2974 3234349 - 3233552 - | dihydrodipicolinate reductase TERM 2363 3233795 - 3233756 - G 70 -14.2 -2.57013 | gap 1, opp_overlap 3233787, overlap 3233752 CGCGAAGCCAATCGA CTTCGCGTCGCGCGGGCCA GTA TGGCCTTCGCG-CGCGTAG ACCGCGCATTCGTCG TERM 2364 3234395 - 3234373 - R 100 -12.7 -4.41047 | opp_overlap 3234372 ATGTCGGAATGAAAA CCGTCCGGC ATTCG ACCGGACGG CTTGGGTGTCTGAAA Rmet_2975 3235204 - 3234428 - | SmpA/OmlA TERM 2365 3234464 - 3234485 + g 75 -7.9 -4.26903 | AACGTCCGAAGCCGC GCTGGCTGG CGCC TCGGCCGGC TTTTGCTGAGCTGCC Rmet_2976 3235281 - 3235712 + | ferric uptake regulator family protein TERM 2366 3235752 - 3235769 + T 100 -14.1 -5.4833 | opp_overlap 3235752 GCAGGCAATAAAAAA CCGGCGC CAAG GCGCCGG TTTTTTATTGGGTCG TERM 2367 3235769 - 3235752 - T 100 -14.1 -5.4833 | opp_overlap 3235752 GCAGGCAATAAAAAA CCGGCGC CAAG GCGCCGG TTTTTTATTGGGTCG Rmet_2977 3236794 - 3235793 - | LysR family transcriptional regulator TERM 2368 3237191 - 3237209 + G 74 -14.6 -2.64155 | opp_overlap 3237184 3237186, overlap 3237189 3237188 CGCAATATCATGGCG GCGGCATG GGC CATGCCGC TCGATTTCGCGCCGC Rmet_2978 3237080 - 3237697 + | flavin reductase-like, FMN-binding TERM 2369 3237689 - 3237746 + T 76 -12.2 -3.33696 | gap 2, opp_overlap 3237702 3237709, overlap 3237709 CCAGTCACCCCACCT GCCG-CCT-GAGCAACAAAAAACGCGCC CGAG GGCGCGTTTTTTGTTCAGCGAGGATGGC TTACTTGGCCACGAC TERM 2370 3237731 - 3237702 - T 91 -19.5 -3.14132 | opp_overlap 3237689 3237709, overlap 3237709 CTGCCGCCTGAGCAA CAAAAAACGCGCC CGAG GGCGCGTTTTTTG TTCAGCGAGGATGGC TERM 2371 3237724 - 3237709 - T 100 -11.8 -5.5112 | opp_overlap 3237709 3237689, overlap 3237702 CTGAGCAACAAAAAA CGCGCC CGAG GGCGCG TTTTTTGTTCAGCGA TERM 2372 3237709 - 3237724 + T 100 -11.8 -5.4505 | opp_overlap 3237702 3237709, overlap 3237689 CTGAGCAACAAAAAA CGCGCC CGAG GGCGCG TTTTTTGTTCAGCGA Rmet_2979 3238745 - 3237747 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2373 3238812 - 3238776 - R 82 -11.4 -3.89614 | gap 1, opp_overlap 3238777, overlap 3238777 TGCAATCGCGATAAA GCTGGGGC-CGGCGCCG CAGC CGGCGCCTCGCGCCGGC ATACCGCGCTGGCGA Rmet_2980 3240810 - 3238831 - | transketolase TERM 2374 3239235 - 3239251 + g 71 -12.3 -3.28712 | GCGCGATATTGGCGC GCGTGAC ATC GTCACGC TTCTGGAACGGCAAG Rmet_2981 3240866 - 3241840 + | spermidine synthase TERM 2375 3242047 - 3242028 - g 100 -15 -4.25104 | opp_overlap 3242025 TGTCGTCGATGAAAA CGGCGTGC CCAT GCACGCCG AGATGCATTACGAAG Rmet_2982 3241906 - 3242340 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_2983 3242340 - 3243083 + | hypothetical protein Rmet_2984 3243101 - 3243730 + | hypothetical protein TERM 2376 3243772 - 3243752 - T 100 -12.6 -5.28942 | opp_overlap 3243752 CACCGCAAACAAAAA TGCCCGCT TTTAC AGCGGGCA TTTTTTTGACCGGAA TERM 2377 3243752 - 3243772 + T 100 -12.6 -5.40072 | opp_overlap 3243752 CACCGCAAACAAAAA TGCCCGCT TTTAC AGCGGGCA TTTTTTTGACCGGAA Rmet_2985 3244436 - 3243828 - | hypothetical protein Rmet_2986 3244876 - 3244433 - | guanine-specific ribonuclease N1 and T1 Rmet_2987 3245570 - 3245217 - | hypothetical protein TERM 2378 3245391 - 3245432 + g 74 -10.1 -3.7108 | opp_overlap 3245395 CCCCCAATCTGCCAA TCGATAGCTCGCACCGTCG AAGC CGATGATGCGGGCGATCCA TTTCGATGTGGCACT Rmet_2988 3246528 - 3245626 - | methylenetetrahydrofolate reductase Rmet_2989 3247288 - 3246620 - | hypothetical protein Rmet_2990 3247785 - 3247285 - | LysR family transcriptional regulator Rmet_2991 3249364 - 3247826 - | integrase catalytic subunit TERM 2379 3249362 - 3249389 + g 78 -4.1 -4.84359 | opp_overlap 3249364 3249368, overlap 3249364 GTCTGCGTATGAGTA CATGAACTACC TCCCCT GGTAGTCCAAG TTTTTGTCCGCATCC Rmet_2992 3250925 - 3249942 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2380 3250653 - 3250641 - G 75 -7.7 -4.25056 | GAGGTCAGGAACAAA GGTGA CGC TCACC CCGGCTTGTGCGCAA Rmet_2993 3251734 - 3250934 - | phosphonate ABC transporter inner membrane protein Rmet_2994 3252609 - 3251731 - | phosphonate-binding periplasmic protein Rmet_2995 3253442 - 3252603 - | phosphonate ABC transporter ATP-binding TERM 2381 3253229 - 3253250 + g 80 -8.7 -4.36914 | CTACCCCACCTGCCA GGCCAGGTA TCGA TACCTCGCC TTTTGTGGGCAGCAC TERM 2382 3253897 - 3253886 - g 79 -5.8 -4.68593 | GGCAGCAGCCAAAAA CCGA TTCG TCGG GCGTCTTGTGATTCA Rmet_2996 3253677 - 3254501 + | LysR family transcriptional regulator Rmet_2997 3254609 - 3255076 + | hypothetical protein Rmet_2998 3257340 - 3255073 - | transposase Tn3 TERM 2383 3255498 - 3255508 + g 72 -8.2 -4.08216 | GCTCGCGCAGGGCGA CGGC CAA GCCG TTTTGGCGCGGATAG TERM 2384 3256994 - 3257018 + g 86 -9.2 -4.50159 | overlap 3256995 3256996 GGCATGACCGCTTCG ATGGCGGCGA ACGGA TCGCCGCCGC TTTGTTTGGCTTCAA TERM 2385 3256995 - 3257017 + g 74 -12.7 -3.29372 | overlap 3256994 3256996 GCATGACCGCTTCGA TGGCGGCGA ACGGA TCGCCGCCG CTTTGTTTGGCTTCA TERM 2386 3256996 - 3257016 + g 70 -14 -2.569 | overlap 3256995 3256994 CATGACCGCTTCGAT GGCGGCGA ACGGA TCGCCGCC GCTTTGTTTGGCTTC Rmet_2999 3257483 - 3257818 + | peptidase TERM 2387 3257865 - 3257831 - f 72 -14.2 -2.62616 | opp_overlap 3257820 TGACTCCCGACAGTA TGGCCGGATCGTTTCC CTC GGAGGCGATCCGGCCC GGAGACCTCATGGAA Rmet_3000 3257875 - 3258471 + | phosphoesterase, PA-phosphatase related Rmet_3001 3258542 - 3259324 + | hypothetical protein Rmet_3002 3259354 - 3259803 + | putative signal peptide protein Rmet_3003 3259813 - 3260571 + | hypothetical protein Rmet_3004 3260594 - 3261259 + | two component transcriptional regulator Rmet_3005 3261256 - 3262587 + | periplasmic sensor signal transduction histidine kinase Rmet_3006 3262616 - 3263047 + | hypothetical protein Rmet_3007 3263728 - 3263114 - | resolvase-like protein Rmet_3008 3265006 - 3263789 - | TniQ Rmet_3009 3265911 - 3265003 - | TniB Rmet_3010 3267443 - 3265914 - | integrase catalytic subunit Rmet_3011 3270498 - 3267469 - | heavy metal efflux pump CzcA Rmet_3012 3271735 - 3270512 - | secretion protein HlyD TERM 2388 3271965 - 3271942 - H 95 -2.4 -5.64274 | overlap 3271944 CTATTCAGAAAAAAA CCGCTTGT CTTGAGCC ACAAGCTG CCGGTAAGTTGACTT TERM 2389 3272400 - 3272432 + G 72 -12.8 -3.16971 | overlap 3272397 3272376 TCACCTTGAGTGCGG CGGGCAAGCCGA TTGTTCTGT TTGGCTTGCCCG TTCCCTCTCTGATCG Rmet_3013 3272057 - 3272608 + | cytochrome B561 Rmet_3014 3272650 - 3273357 + | hypothetical protein Rmet_3015 3274783 - 3273371 - | periplasmic sensor signal transduction histidine kinase Rmet_3016 3275452 - 3274787 - | two component transcriptional regulator TERM 2390 3274964 - 3274933 - G 82 -7.2 -4.6526 | gap 1, overlap 3274934 ACAAATGTTCAAAAA TCTGCG-AGCGCGAC AGC GTGGCGCCGCGCCGA CGCAGCAGCAAGTCG Rmet_3017 3276810 - 3275467 - | ferric reductase-like transmembrane component-like TERM 2391 3276064 - 3276040 - G 77 -11.3 -3.75629 | opp_overlap 3276044 CATGGCGAAGGCAAA CTGTCCGGGCC GGT GGCCGGGCCAG CCCGGGTCCATCCGC TERM 2392 3276237 - 3276218 - G 89 -15 -3.72968 | AGCAGCATAGCCAAA GCCCAGCC CACG GGCTGGGC CCAGTAGGAGAACTG TERM 2393 3276510 - 3276452 - G 72 -13.2 -3.06915 | gap 4, opp_overlap 3276452, overlap 3276442 ATGGAGCCCATTGAA TCGGCCGTTGCGC-GGGGCTTGC-G-CGCG GGG CGCGTCAGCCAGCCCCAGC-CTACGGCCCA TTTAGTACCCTGCGC TERM 2394 3276452 - 3276510 + g 84 -13.2 -3.74693 | gap 4, opp_overlap 3276442 3276452 ATGGAGCCCATTGAA TCGGCCGTTGCGC-GGGGCTTGC-G-CGCG GGG CGCGTCAGCCAGCCCCAGC-CTACGGCCCA TTTAGTACCCTGCGC Rmet_3018 3279002 - 3277026 - | hypothetical protein TERM 2395 3277745 - 3277767 + g 71 -9.9 -3.78934 | gap 1, opp_overlap 3277743 3277747 CGGTACGGTACAAGC CATCGCTCGC CAGC GCG-GCGATG TTCTTGTCCGCCGCG Rmet_3019 3279388 - 3278999 - | hypothetical protein TERM 2396 3279025 - 3279059 + g 75 -13.7 -2.91912 | gap 2, opp_overlap 3279022 3279021 3279048 CTCCCTGCAAACTCT GGCGTGTCCGGGCGTGC GAA GCACGC--GGACATGCC TGTATCGGTGCGTGC Rmet_3020 3280037 - 3279450 - | TraF peptidase Rmet_3021 3280558 - 3280034 - | hypothetical protein Rmet_3022 3280818 - 3280555 - | hypothetical protein TERM 2397 3280648 - 3280664 + g 74 -15.1 -2.62616 | CGATACCTTGATGCG CGCCCGC ATG GCGGGCG TGATGTCGAGGGTCA TERM 2398 3280757 - 3280798 + g 76 -14.4 -3.14344 | opp_overlap 3280738 TCGGCGTGCGGATTC GCGGGCGGGCGAGCGC CGATGCCGAT GCGCTTGCCCGTGCGC TTGCTGGCAGGAGTG Rmet_3023 3281453 - 3280815 - | cobyrinic acid a,c-diamide synthase TERM 2399 3281400 - 3281426 + g 81 -11.6 -4.05446 | gap 1, overlap 3281361 3281368 GCCGGCGATGTGGGT GGCGAGCGTGG TCTTGC CCACGC-CGCC TTTCTGGTTGAGCAG Rmet_3024 3282564 - 3281707 - | putative replication initiator and transcription repressor protein Rmet_3025 3282917 - 3282591 - | hypothetical protein TERM 2400 3282959 - 3282989 + r 72 -11.3 -3.28712 | opp_overlap 3282946 3282947 3282984, overlap 3282947 AAGCCCTCCTGCTCA GGGTCGTTTTG CGCTCTCTT CAAAACGACCC TTCTCAAGCGGCGGC Rmet_3026 3283714 - 3282956 - | hypothetical protein Rmet_3027 3284403 - 3284056 - | putative lipoprotein TERM 2401 3284121 - 3284107 - G 77 -12.8 -3.31461 | CAGGTACTCCGACAA CGGGCG CAC CGCCCG GAAATACCGATCTCG TERM 2402 3284463 - 3284428 - H 71 -5.4 -4.38712 | gap 1, opp_overlap 3284444 3284451 3284452, overlap 3284444 3284452 CTCATTCGCACAAAA CCGCCGAAGCGTG AAAGCGCAAAA C-CGCATCGGCGG GTTTGTGGAAAGGCA TERM 2403 3284444 - 3284495 + H 86 -13.8 -3.48593 | opp_overlap 3284428 3284444 3284452, overlap 3284451 3284452 CGCCGAAGCGTGAAA GCGCAAAACCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGGTTTTGTGC TTCTGTGAGAAGCTG TERM 2404 3284495 - 3284444 - H 88 -13.8 -3.60792 | opp_overlap 3284444 3284451 3284452, overlap 3284428 3284452 CGCCGAAGCGTGAAA GCGCAAAACCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGGTTTTGTGC TTCTGTGAGAAGCTG TERM 2405 3284452 - 3284487 + H 73 -4.6 -4.60073 | opp_overlap 3284428 3284444 3284452, overlap 3284451 3284444 CGTGAAAGCGCAAAA CCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGG TTTTGTGCTTCTGTG TERM 2406 3284463 - 3284452 - H 71 -7.2 -4.24002 | opp_overlap 3284451 3284452 3284444, overlap 3284428 3284444 CGTGAAAGCGCAAAA CCGC ATCG GCGG GTTTGTGGAAAGGCA Rmet_3028 3284627 - 3284920 + | XRE family transcriptional regulator TERM 2407 3285271 - 3285231 - T 83 -16.1 -3.05463 | gap 1, opp_overlap 3285260, overlap 3285239 AGTCTGCTGATCCAA GCAGTACAGCGCCCCGCC GCAGTG GGCGGGGCGCTGG-CGGC CGTCAGGCCGCCTGG TERM 2408 3285264 - 3285239 - T 88 -19 -2.8664 | opp_overlap 3285260, overlap 3285231 GATCCAAGCAGTACA GCGCCCCGCC GCAGTG GGCGGGGCGC TGGCGGCCGTCAGGC Rmet_3029 3285588 - 3285274 - | hypothetical protein Rmet_3030 3286326 - 3285934 - | hypothetical protein TERM 2409 3286365 - 3286319 - G 88 -17.8 -3.12351 | overlap 3286297 3286343 GGCCGTGACAGCGAA GTCGGCACGGGGCGCAGCCCGA AAG CCCGGCGGCGCTACGCGCCGAC ACGCCCAGGCCGTTC TERM 2410 3286369 - 3286343 - H 77 -11.4 -3.57144 | opp_overlap 3286367, overlap 3286319 GGGCGCAGCCCGAAA GCCCGGCGGCGC TAC GCGCCGACACGC CCAGGCCGTTCTATA TERM 2411 3286828 - 3286849 + G 95 -12.3 -4.38712 | gap 1, overlap 3286829 ATGCGGGCCTGCAAC T-GCCGGGCG TGC CGCCCGGCTA TTTTCTCGCACTGGC TERM 2412 3286829 - 3286847 + G 93 -17.4 -3.80133 | overlap 3286828 TGCGGGCCTGCAACT GCCGGGCG TGC CGCCCGGC TATTTTCTCGCACTG Rmet_3031 3286410 - 3286928 + | GCN5-related N-acetyltransferase TERM 2413 3286976 - 3287003 + T 100 -19.8 -3.47349 | opp_overlap 3286977, overlap 3286970 3286977 3287002 CTATTCGGCTTCAAC ACCGGGCGCGGC CACC GCCGCGCCCGGA TTATGCGTTTCACCG TERM 2414 3286977 - 3287002 + T 100 -23.3 -2.68088 | opp_overlap 3286977, overlap 3286976 3286970 TATTCGGCTTCAACA CCGGGCGCGGC CACC GCCGCGCCCGG ATTATGCGTTTCACC TERM 2415 3287002 - 3286977 - T 100 -23.3 -3.01924 | opp_overlap 3286977 3286976 3286970 TATTCGGCTTCAACA CCGGGCGCGGC CACC GCCGCGCCCGG ATTATGCGTTTCACC TERM 2416 3287002 - 3287060 + T 95 -20.5 -2.69596 | overlap 3286976 3286970 3287004 3287004 CCACCGCCGCGCCCG GATTATGCGTT-TCACCGCGCCCAGGGCG GAA CGGCCTGGGCGCGGTGCTGACG-ATGATC ATTCCTTCGTTTCGA TERM 2417 3287004 - 3287058 + T 85 -17.3 -2.88425 | overlap 3286970 3287002 3287004 ACCGCCGCGCCCGGA TTATGCGTT-TCACCGCGCCCAGGGCG GAA CGGCCTGGGCGCGGTGCTGACG-ATGA TCATTCCTTCGTTTC Rmet_3032 3287268 - 3287059 - | hypothetical protein TERM 2418 3287291 - 3287314 + r 89 -17.4 -3.17723 | opp_overlap 3287291, overlap 3287296 TCTCCTTGCAGCGAA GCGCCCCGGT CGAA GCCGGGGCGC TTGCCTTCGGCGTGG TERM 2419 3287314 - 3287291 - R 87 -16.7 -3.05384 | opp_overlap 3287291 3287296 TCTCCTTGCAGCGAA GCGCCCCGG TCGAAG CCGGGGCGC TTGCCTTCGGCGTGG Rmet_3033 3289397 - 3287331 - | ParB family protein Rmet_3034 3290300 - 3289473 - | hypothetical protein Rmet_3036 3291236 - 3291535 + | hypothetical protein TERM 2420 3291576 - 3291553 - T 72 -13.8 -2.56596 | opp_overlap 3291558, overlap 3291549 TCCGGCATGAAGGGA GCGATCCGGC ACCA GCCGGTTCGC TGCGCGAGAGGGGCG Rmet_3037 3291956 - 3291678 - | hypothetical protein TERM 2421 3291817 - 3291798 - G 79 -7.1 -4.46212 | overlap 3291799 GCTGGGACGATAAAA CCCGGTG ACGCGG CACCGGA ACTGTGCGCCAAACC TERM 2422 3292015 - 3291986 - R 72 -13.5 -2.6415 | overlap 3291985 GAAATGATTGAGAAC GCTCAGGAGCGCC TTGC GGCGCCCCAGAAC CAGGTCAGACAACGA Rmet_3038 3292370 - 3292020 - | hypothetical protein Rmet_3039 3293817 - 3293011 - | beta-lactamase-like protein Rmet_3040 3296118 - 3293863 - | UBA/THIF-type NAD/FAD binding fold TERM 2423 3294044 - 3294058 + g 72 -8.6 -4.07568 | opp_overlap 3294038 3294037 3294035 CCCAAAGAGGCCGCG TTTGCG GCG CGCAAA TTTTGAACAAGCCCG TERM 2424 3295380 - 3295353 - G 70 -11.2 -3.39449 | CGCGATCAATACCAA GCTCCGCTGCTC GATC GAGCAGCGTCGC GAGATCGACAACTGT Rmet_3041 3297308 - 3296115 - | hypothetical protein TERM 2425 3296980 - 3296992 + g 78 -3.3 -4.85396 | GGGGACGACCACATC TCGCG GAT CACGA TTTTCTTGTCCTTGT TERM 2426 3297340 - 3297363 + H 85 -2.5 -5.38047 | gap 1 ACGACCGAAGGATGA TCG-CGTATA GTTAA TGTACGACGA TTTTTTATATCCGTC Rmet_3042 3297398 - 3298300 + | hypothetical protein Rmet_3043 3298307 - 3299095 + | hypothetical protein Rmet_3044 3300277 - 3299141 - | hypothetical protein TERM 2427 3299958 - 3299936 - G 85 -16.4 -3.01712 | TGGCTCCGGGGAAGA TTCGCCAGAC ACT GTCTGGCGAA TTGGCCGGGTCAGAA TERM 2428 3300246 - 3300192 - G 80 -15.7 -2.80816 | opp_overlap 3300224 GCGGCATCGAGCAGA TC-CACGATGCCGCCGTGGATGCCGGC GTA GCCGGCAGGCACGGCGGCGG-GTGCGA CTCCCGCCATCGCAG Rmet_3045 3301521 - 3300274 - | phage integrase TERM 2429 3301203 - 3301245 + g 80 -14.9 -3.14132 | AACGGGCGGCGGCCT TGGCCGCGCTGGGGT-CGCCG CCC CGGCGCACCTCGGC-CAGCCA TTCCTGGGCCAGCGA TERM 2430 3301680 - 3301651 - R 73 -13.7 -2.74461 | opp_overlap 3301658, overlap 3301658 GAGTCATGGTGAAAT GAAAAAAGCCGGG CGAA CCCGGCTTTTTTG GCACTGCATCAAGAA TERM 2431 3301658 - 3301673 + r 100 -11.8 -5.03314 | opp_overlap 3301651 3301658 GGTGAAATGAAAAAA GCCGGG CGAA CCCGGC TTTTTTGGCACTGCA TERM 2432 3301673 - 3301658 - R 100 -11.8 -5.37593 | opp_overlap 3301658, overlap 3301651 GGTGAAATGAAAAAA GCCGGG CGAA CCCGGC TTTTTTGGCACTGCA Rmet_3046 3304040 - 3301716 - | malic enzyme TERM 2433 3302625 - 3302658 + g 79 -11.7 -3.91357 | gap 1, overlap 3302614 3302643 CACCGCACGCAGCAC GCGC-TCTTCCTCGCC CTC GGCGAAGACGATGCGC TTCTTCTCCTTCTGC TERM 2434 3302768 - 3302789 + g 72 -11.5 -3.53224 | CGTCCATGTCCTCGA TCGGGCGCG ATGC CACGCCCGA TTTGGCGGCGGCCTC TERM 2435 3304908 - 3304877 - g 71 -10.8 -3.64703 | gap 1 GTCCCCGGATGGAAA TGCCGACGCCCCGCG TGG CGCTGGGCCT-GGCA CTGCGCGGCGTGGCT Rmet_3047 3304300 - 3305277 + | thiamine monophosphate kinase Rmet_3048 3305375 - 3305947 + | phosphatidylglycerophosphatase Rmet_3049 3305994 - 3306491 + | CinA-like protein pyrF 3307359 - 3306541 - | orotidine 5'-phosphate decarboxylase TERM 2436 3307588 - 3307546 - H 74 -5.7 -4.56597 | gap 4, overlap 3307548 GCTTCCGCTTAAAAA GAGCGACG-GC-GACG-CCTG GGTTG CAGGACGTCCGCACGCCGC-C AGTCTCCCGATTCAT TERM 2437 3307587 - 3307548 - H 73 -9.4 -3.90048 | gap 3, overlap 3307546 TTCCGCTTAAAAAGA GCGACG-GC-GACG-CCTG GGTTG CAGGACGTCCGCACGCCGC CAGTCTCCCGATTCA TERM 2438 3308047 - 3308092 + G 72 -11.1 -3.53091 | gap 1, overlap 3308048 CCGCGCTGACCGGCA GCCCGGCCGGCACGCTGCTG ATGCTGG TAGCCGC-TGCCGGCTGGGG TTTCGGCACCCAGCT TERM 2439 3308048 - 3308091 + G 75 -14.6 -2.71712 | gap 1, overlap 3308047 CGCGCTGACCGGCAG CCCGGCCGGCACGCTGCTG ATGCTGG TAGCCGC-TGCCGGCTGGG GTTTCGGCACCCAGC Rmet_3051 3307602 - 3308486 + | hypothetical protein TERM 2440 3308703 - 3308728 + F 81 -13.3 -3.32293 | overlap 3308702 3308700 CCGCCCGTCGCCGTC CTTGCCCGCAG ACAC CTGCGGGTGAG TGTCTTTCCGTTTCC Rmet_3052 3309013 - 3309975 + | magnesium and cobalt transport protein CorA mtgA 3310726 - 3310025 - | monofunctional biosynthetic peptidoglycan transglycosylase aroE 3311718 - 3310810 - | shikimate 5-dehydrogenase Rmet_3055 3312704 - 3311718 - | TonB-like protein TERM 2441 3312728 - 3312695 - G 86 -13.7 -3.68886 | opp_overlap 3312689, overlap 3312696 AGGAATCGATCGAAA CGCCGGCCACCCCAC TGTC GGGGGGCGGCCGGAA CAGGTTTCGATTGTA TERM 2442 3312727 - 3312696 - G 77 -15 -2.8085 | opp_overlap 3312689, overlap 3312695 GGAATCGATCGAAAC GCCGGCCACCCCAC TGTC GGGGGGCGGCCGGA ACAGGTTTCGATTGT Rmet_3056 3314919 - 3312781 - | ribonuclease II Rmet_3057 3315805 - 3315065 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 2443 3315600 - 3315555 - G 71 -11.9 -3.27475 | gap 1, opp_overlap 3315599, overlap 3315553 TTGTTGACGAGAACA TCGATGCGACCGTGGCGGGCCA GCG TGGCT-GCCACCATGGCATCGA CCTCGTCGCGGCGCG TERM 2444 3315774 - 3315753 - G 76 -9.3 -4.07568 | overlap 3315757 TCGGCGGTGGCAAAA CCGATGCCG GCGG CGGCGCCGG TGATGATCGCTACGC Rmet_3058 3316464 - 3315802 - | chorismate lyase TERM 2445 3316416 - 3316438 + g 72 -7 -4.20932 | gap 1, opp_overlap 3316399 CGTCATACGGCAGAT GC-GCGTGC CATGCC GCACGCAGC TTTTGCATCCCTGTT Rmet_3059 3317060 - 3316461 - | hypothetical protein TERM 2446 3316797 - 3316814 + g 84 -8.4 -4.56597 | CGCCGGATTCAGCAG CACGGC GCGGCA GCCGTG TTTTTCCGCCAGCCA Rmet_3060 3318506 - 3317073 - | UDP-N-acetylmuramate TERM 2447 3317551 - 3317524 - G 75 -10.6 -3.86897 | gap 1, overlap 3317535 TTGACGTTGGAGAAA CGGC-CAAGCGAC TCG ATCGCCTGCGCCG GCGGCACGCCCACGT TERM 2448 3319020 - 3319004 - g 86 -13.7 -3.70149 | TCGACACCAGCGAAA GCCGGCA CTT TGCCGGC CGTGGGGATGTCGAA Rmet_3061 3318577 - 3319260 + | hypothetical protein Rmet_3062 3319343 - 3319885 + | thioredoxin-like protein Rmet_3063 3320115 - 3320603 + | 3-dehydroquinate dehydratase TERM 2449 3321306 - 3321279 - g 76 -9.1 -4.08064 | gap 1, opp_overlap 3321279 3321278 3321276 3321289, overlap 3321267 3321297 AATCCTGGTCGAAAA CGGTCAGGCCGT CGAAT ACGGCCAG-CCG CTGTTCGTGATCGGC Rmet_3064 3320863 - 3321324 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit Rmet_3065 3321439 - 3322806 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 2450 3322878 - 3322911 + G 74 -10.9 -3.63515 | opp_overlap 3322878 3322877 ATGTGTGATCGAAAT TGCGCAGGAGCAGGC GGAA GCCTGGTCCGACGCA TTGTTCGACCTCGGC prmA 3322849 - 3323763 + | ribosomal protein L11 methyltransferase TERM 2451 3324323 - 3324274 - g 77 -13.4 -3.35813 | overlap 3324275 3324293 3324302 3324303 GTCGAGGCCAACGAA CCGGAAGCGGCCGACGAAACGC GCGAAA GCGCCGCGCCCGCCGCTGCCGA AGCTGGCGACGAGGC TERM 2452 3324322 - 3324275 - g 74 -14.7 -2.61274 | overlap 3324274 3324293 3324302 3324303 TCGAGGCCAACGAAC CGGAAGCGGCCGACGAAACGC GCGAAA GCGCCGCGCCCGCCGCTGCCG AAGCTGGCGACGAGG TERM 2453 3325310 - 3325352 + G 89 -13.5 -4.07568 | gap 1 AGTTGCTGCTGCGGC GCGTGCTGCTGCCGGCTG ACTACCTG CAGCCGG-ACCAGCGCGC TTTTGCCACCACGGG Rmet_3067 3323773 - 3325458 + | Zinc finger/thioredoxin putative TERM 2454 3325919 - 3325904 - g 71 -11.8 -3.19602 | overlap 3325902 GCGTGGACATCAAGA CCGGCC CGCT GGCCGG CGTGTGCGCTCGCGC Rmet_3068 3325537 - 3326037 + | thiol peroxidase (atypical 2-Cys peroxiredoxin) TERM 2455 3326091 - 3326067 - f 83 -15.8 -3.0752 | opp_overlap 3326067 CACAGTAGTTCAACA TTCCGCCCGT CATGC ACGGGCGGAA TTCATTAACGTATCT TERM 2456 3326067 - 3326091 + F 89 -15.8 -3.37053 | opp_overlap 3326067 CACAGTAGTTCAACA TTCCGCCCGT CATGC ACGGGCGGAA TTCATTAACGTATCT TERM 2457 3326771 - 3326734 - g 71 -12 -3.25015 | gap 1, overlap 3326727 GTCAATGACTACGAA GCGCAGGTCC-TGCTGT CACGC ACCGCATGGACCAGCGC AGAGGTAGCCGCCAA Rmet_3069 3326140 - 3327087 + | PfkB TERM 2458 3327178 - 3327204 + G 75 -14.5 -2.72227 | gap 1, overlap 3327173 3327184 TCCTACGTATCGGCG GCGTCGCCG-TG TTGG CAGCGGCGACGC TGCTTGCCGGGTGTT Rmet_3070 3327153 - 3327620 + | 17 kDa surface antigen TERM 2459 3327680 - 3327656 - T 82 -15 -3.20901 | gap 1, opp_overlap 3327656 ACCCCAGCAATCGAA CGCCGCGTGCC GTCA GGC-CGCGGCG TTTTGCTTTTGCGCG TERM 2460 3327656 - 3327680 + T 100 -15 -4.67038 | gap 1, opp_overlap 3327656 ACCCCAGCAATCGAA CGCCGCGTGCC GTCA GGC-CGCGGCG TTTTGCTTTTGCGCG TERM 2461 3327801 - 3327774 - T 100 -9.9 -5.72622 | gap 2 CCCAGAAATAAAAAA CCCGCCG--GGCA CGGA TGCCATCGGCGGG TTGGCAAGACTGCCG Rmet_3071 3328517 - 3327912 - | histone H1-like protein TERM 2462 3328469 - 3328494 + g 93 -6.1 -5.27335 | gap 1, overlap 3328461 3328471 3328472 CCTTCTTGGCGGCCG GCTTGGCGGC CTTCTTA GCCGCC-GGC TTTTTCTTTGCAGCA Rmet_3072 3328988 - 3328554 - | hypothetical protein TERM 2463 3328974 - 3328964 - G 74 -4.6 -4.57073 | CACGCGTTTTAAAAA GCCA TTT CGGC TCAGTCTGCGTCAAA Rmet_3073 3329598 - 3329194 - | hypothetical protein TERM 2464 3329744 - 3329766 + G 74 -13.5 -3.25015 | GCTCCGTGCGCGTCG CCACATCGC GACTG GCGATGTGG TTCGTGATGGTTGGA Rmet_3074 3329641 - 3330198 + | hypothetical protein Rmet_3075 3330215 - 3330676 + | putative signal peptide protein TERM 2465 3331337 - 3331286 - g 84 -13.6 -3.66018 | gap 1, opp_overlap 3331289, overlap 3331289 CGAGTATTCGAAGAA GCAGGGTGGCGTGCCGTTCGCTACC GCC GGCAGCGG-CAGCACGCCGCACTTC GTCGAGGAAATGCTC TERM 2466 3331289 - 3331334 + G 76 -13.9 -3.14344 | gap 1, opp_overlap 3331286 3331289 GTATTCGAAGAAGCA GGGTGGCGTGCCGTTCGCTACC GCC GGCAGCG-GCAGCACGCCGCAC TTCGTCGAGGAAATG TERM 2467 3331334 - 3331289 - g 75 -13.9 -2.94045 | gap 1, opp_overlap 3331289, overlap 3331286 GTATTCGAAGAAGCA GGGTGGCGTGCCGTTCGCTACC GCC GGCAGCGG-CAGCACGCCGCAC TTCGTCGAGGAAATG Rmet_3076 3330837 - 3331808 + | hypothetical protein TERM 2468 3331851 - 3331879 + F 100 -16 -4.18018 | opp_overlap 3331849 3331845, overlap 3331855 GTGACCAAATGTATG CATACGGCCCGC CTTGA GCGGGCCGTTTG TTTTGCATCACCGCC TERM 2469 3331855 - 3331875 + F 100 -15.4 -4.68908 | opp_overlap 3331849 3331845, overlap 3331851 CCAAATGTATGCATA CGGCCCGC CTTGA GCGGGCCG TTTGTTTTGCATCAC Rmet_3077 3332074 - 3334335 + | TonB-dependent siderophore receptor TERM 2470 3334342 - 3334369 + F 75 -7.6 -4.20531 | opp_overlap 3334336, overlap 3334343 CGCATGTAAGTGCCG CCGGGGCCGC AGCGCCGG GCGGCTCCGA TTTTCGCTCACTATC Rmet_3078 3334397 - 3335083 + | putative hydroxylase Rmet_3079 3336142 - 3335105 - | LysR family transcriptional regulator Rmet_3080 3336141 - 3336539 + | 4-oxalocrotonate tautomerase Rmet_3081 3336654 - 3337487 + | aldo/keto reductase Rmet_3082 3338078 - 3337542 - | hypothetical protein Rmet_3083 3338126 - 3338821 + | putative lipoprotein rdgC 3339082 - 3340020 + | recombination associated protein Rmet_3085 3341011 - 3340049 - | zinc-binding alcohol dehydrogenase Rmet_3086 3341091 - 3342089 + | hypothetical protein TERM 2471 3342134 - 3342108 - T 100 -18.8 -5.47159 | GCCAAGAAACAAAAA CGGACATCAGGC TCC GCCCGATGTCCG CACACTACCCATTCT Rmet_3087 3343370 - 3342183 - | ribonucleotide-diphosphate reductase subunit beta Rmet_3088 3346450 - 3343511 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2472 3345596 - 3345620 + g 81 -9.9 -4.25283 | CAGCGCGGCGCCCAG GCGGGCCAGGT CGT ACGTGGCCAGC TTTTCGTCGAGCAGT TERM 2473 3346701 - 3346686 - R 79 -7.6 -4.56597 | GGCTCCCCGGAAAAA CCACTA GATG TAGTGG TCACATCGAAAATCT Rmet_3089 3347571 - 3346969 - | N-acetyl-anhydromuranmyl-L-alanine amidase Rmet_3090 3349246 - 3347564 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2474 3347826 - 3347872 + g 70 -11.2 -3.32844 | overlap 3347827 GCATCGGGGGCAGGC ACGGCGACCGGCCCTGCCACGG GAA TCGGGGCCGGCACGGGCGCCGG TTCTGGCATCACCGC TERM 2475 3347827 - 3347871 + g 74 -14.7 -2.59564 | overlap 3347826 CATCGGGGGCAGGCA CGGCGACCGGCCCTGCCACGG GAA TCGGGGCCGGCACGGGCGCCG GTTCTGGCATCACCG TERM 2476 3348346 - 3348293 - G 73 -12.3 -3.4072 | gap 1, opp_overlap 3348305 3348308 3348337, overlap 3348294 GAGGCGGTAGTACAA GTCCTGCCGGAATGCTCCGGCGGCGA CCA TCGCCGCCAGATCCTTGTGGCTGG-C GCACATGACGCGCAC TERM 2477 3348305 - 3348335 + g 70 -11 -3.35679 | opp_overlap 3348293 3348294, overlap 3348308 CAAGTCCTGCCGGAA TGCTCCGGCGGCGA CCA TCGCCGCCAGATCC TTGTGGCTGGCGCAC TERM 2478 3348308 - 3348332 + g 80 -15.7 -2.8474 | opp_overlap 3348293 3348294, overlap 3348305 GTCCTGCCGGAATGC TCCGGCGGCGA CCA TCGCCGCCAGA TCCTTGTGGCTGGCG Rmet_3091 3351288 - 3349252 - | multi-sensor signal transduction histidine kinase Rmet_3092 3351557 - 3351285 - | hypothetical protein TERM 2479 3351414 - 3351426 + g 75 -7.7 -4.25104 | overlap 3351409 GTGCGCGCACTGGAC CATCG GTT CGATG TTTTCGTCGCCAGCG Rmet_3093 3352511 - 3351573 - | cytochrome c assembly protein TERM 2480 3353112 - 3353123 + G 70 -2.2 -4.62069 | ACTGTGTCCGAGCAG GTTG GCGT CGAC TTTTTCCCGTCCCAG Rmet_3094 3352629 - 3354020 + | signal recognition particle subunit FFH/SRP54 (srp54) Rmet_3095 3354095 - 3354637 + | hypoxanthine-guanine phosphoribosyltransferase Rmet_3096 3355501 - 3354863 - | lysine exporter protein LysE/YggA Rmet_3097 3357076 - 3355655 - | hypothetical protein Rmet_3098 3358231 - 3357350 - | 2OG-Fe(II) oxygenase Rmet_3099 3358991 - 3358236 - | lytic transglycosylase, catalytic TERM 2481 3358962 - 3358939 - G 75 -10.2 -3.83026 | GTCGCGCACAGCAAA CCGCCAGCCC AGGC GGACCAGCGG TTGCGCGTCGGCAGG Rmet_3100 3360728 - 3359007 - | prolyl-tRNA synthetase Rmet_3101 3360913 - 3361638 + | dinucleoside polyphosphate hydrolase TERM 2482 3361646 - 3361667 + G 72 -12.9 -3.13403 | overlap 3361645 ATGATTAGTTTCAGC GGCCGGCAC ATTC GCGCCGGCC TGTTGCTGACAGCAG Rmet_3102 3361631 - 3362236 + | putative lipoprotein TERM 2483 3362285 - 3362260 - T 100 -19 -5.67063 | opp_overlap 3362260 CCGAGCATAAAAAAA CGGCGGGGCC TTTGCG GGCCCCGCCG TTTTTCATGGGTTCG TERM 2484 3362260 - 3362285 + T 100 -19.7 -4.77157 | opp_overlap 3362260 CCGAGCATAAAAAAA CGGCGGGGCCT TTGC GGGCCCCGCCG TTTTTCATGGGTTCG Rmet_3103 3363437 - 3362319 - | gamma-glutamyl kinase obgE 3364572 - 3363475 - | GTPase ObgE TERM 2485 3364602 - 3364630 + r 70 -3.6 -4.66537 | overlap 3364603 GTGGTTCGGGCTTGT CGCCGCCGGCCC TCGAC GGGTCAGCGCCA TTTTATCTTGGCAGA TERM 2486 3364655 - 3364677 + r 82 -14.8 -3.21099 | opp_overlap 3364656, overlap 3364656 3364675 GGCAGAAAACAAAAA AGCCCCGCAG TCA CTGCGGGGCC TTCGTGCTGCAAAGG TERM 2487 3364676 - 3364656 - R 100 -18.3 -5.86976 | opp_overlap 3364655 3364656 3364675 GCAGAAAACAAAAAA GCCCCGCAG TCA CTGCGGGGC CTTCGTGCTGCAAAG TERM 2488 3364656 - 3364676 + r 85 -18.3 -2.52516 | opp_overlap 3364656, overlap 3364655 3364675 GCAGAAAACAAAAAA GCCCCGCAG TCA CTGCGGGGC CTTCGTGCTGCAAAG rpmA 3364958 - 3364698 - | 50S ribosomal protein L27 rplU 3365321 - 3365010 - | 50S ribosomal protein L21 Rmet_3107 3365783 - 3366760 + | polyprenyl synthetase TERM 2489 3366979 - 3366954 - f 100 -14.7 -5.07567 | opp_overlap 3366954 CCAGATTTCAAAAAA GCCGGATCCTC GCAT GTGGATCCGGC TTTTTGCTTTGTGGT TERM 2490 3366954 - 3366979 + F 100 -14.7 -5.05505 | opp_overlap 3366954 CCAGATTTCAAAAAA GCCGGATCCTC GCAT GTGGATCCGGC TTTTTGCTTTGTGGT TERM 2491 3367259 - 3367281 + G 81 -16.3 -2.72379 | overlap 3367261 CCTCGCGCTTGCCCA GAGCCGGCG GATCG CGCCGGCTC TGCTTGCCCAGTTGG Rmet_3108 3367233 - 3368954 + | type II secretion system protein E TERM 2492 3369127 - 3369098 - g 72 -7.1 -4.23892 | overlap 3369122 3369123 GCCAAGGACCGAAAA GGCAAGTCGTTCA AGGG CGAACAACGCGCC GAGAGCCAGTCCGAG Rmet_3109 3368984 - 3370249 + | type II secretion system protein TERM 2493 3370288 - 3370308 + G 100 -18.3 -4.11664 | AGCTGTCCTGTCATC GCTGGCGGC GTT GCCGCCAGC TTTCCTTATTGTCGC Rmet_3110 3370268 - 3371137 + | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A Rmet_3111 3371208 - 3371852 + | dephospho-CoA kinase TERM 2494 3372304 - 3372264 - g 70 -11.2 -3.40371 | gap 2, overlap 3372265 GACCTGATCAAGGAA CTCGAGCGC--CAGCGCCAG GCC CTGGCGCCGCTGCGCTCCAA TCCGCAGATTGATCA Rmet_3112 3372075 - 3372833 + | hypothetical protein Rmet_3113 3372842 - 3373033 + | hypothetical protein Rmet_3114 3375149 - 3373119 - | oligopeptide transporter OPT TERM 2495 3375199 - 3375178 - R 100 -11.5 -5.40474 | opp_overlap 3375176 3375179, overlap 3375179 AGTGGTCGAAAAAAA TTGCCCGGC AAGA GCCGGGCAT CGATTTCAGCTTGCG TERM 2496 3375198 - 3375179 - R 93 -15 -3.83561 | opp_overlap 3375176 3375179, overlap 3375178 GTGGTCGAAAAAAAT TGCCCGGC AAGA GCCGGGCA TCGATTTCAGCTTGC TERM 2497 3375179 - 3375198 + r 76 -15 -2.66326 | opp_overlap 3375179 3375178, overlap 3375176 GTGGTCGAAAAAAAT TGCCCGGC AAGA GCCGGGCA TCGATTTCAGCTTGC Rmet_3115 3375648 - 3375205 - | NUDIX hydrolase Rmet_3116 3376556 - 3375645 - | hypothetical protein TERM 2498 3376153 - 3376127 - G 88 -10.1 -4.37092 | opp_overlap 3376114, overlap 3376114 AGTCGTCGCAGAAAA TCGCGAAGCGC TCGGG GCGCTGCGCAA GCTGCTCGACGATGT argJ 3377809 - 3376583 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 2499 3377643 - 3377623 - G 74 -11.1 -3.60296 | overlap 3377590 3377624 GATGCTCACGGCAAA CCTGCACGG GCG CCGCGCAGA ACCGGTTTTGCGTGA TERM 2500 3377879 - 3377846 - R 89 -16.9 -3.16881 | opp_overlap 3377837 3377848 GATGCACCTGACGAA CATGCCCGCTTGA CGCAGGGT TCAAGCGGGCATG TGCTGGATGGTTTGG TERM 2501 3377848 - 3377877 + r 73 -13.7 -2.82208 | gap 1, opp_overlap 3377846, overlap 3377837 TGCACCTGACGAACA TGCCCGCTTGACGC AGG GT-TCAAGCGGGCA TGTGCTGGATGGTTT Rmet_3118 3380732 - 3377940 - | preprotein translocase subunit SecA TERM 2502 3378041 - 3378070 + g 72 -12.7 -3.1552 | overlap 3378018 CCAGCGCCGCTTCGC CGCCCATCGCGGC CAGC GCCGCGGCGGCCG TGTTGCTGCGTGCCG TERM 2503 3379607 - 3379617 + g 72 -6.8 -4.30576 | GGAACGTGATGGTGG CCAG CGT CTGG TTTTCCTGCTGGACG TERM 2504 3380917 - 3380945 + r 78 -13.9 -3.19026 | CGTCCGGGACAGGCT GCTGGTGAGGTTG GGA CAACCTCACCGAC TTCAATGTTCCGCTG Rmet_3119 3381912 - 3380980 - | peptidase M23B TERM 2505 3381958 - 3381933 - H 100 -16.1 -4.14511 | overlap 3381935 AACCCCACCCCAAAA GACGGGGCCGC TCTT GCGGCCCCGTG CGCACGCGGGCAAAG TERM 2506 3381956 - 3381935 - H 100 -18.7 -3.6692 | overlap 3381933 CCCCACCCCAAAAGA CGGGGCCGC TCTT GCGGCCCCG TGCGCACGCGGGCAA Rmet_3120 3382021 - 3382524 + | hypothetical protein TERM 2507 3382616 - 3382640 + T 82 -12.1 -3.60098 | opp_overlap 3382616 GCAGACAACAAAAAA CCCCGTGCC CTTACGA GGCGCGGGG TTTCCGATCGAAGCT TERM 2508 3382640 - 3382616 - T 100 -10.6 -5.60689 | opp_overlap 3382616 GCAGACAACAAAAAA CCCCGTGCCC TTACG AGGCGCGGGG TTTCCGATCGAAGCT lpxC 3383589 - 3382672 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Rmet_3122 3384249 - 3383743 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2509 3384416 - 3384379 - R 100 -26.4 -3.53012 | gap 1, opp_overlap 3384378 3384380 3384382 GGCTTGCTGCTCAAA CG-CCGCGCGGCGCGTC TTGTG GACGCGCCGCGCGGACG GGGGCACATCCCGCC TERM 2510 3384490 - 3384448 - R 79 -12.7 -3.55444 | gap 2, overlap 3384451 CTGGGAGGCGGGAAA CCAGT-CCGGGGAGGC-GGCC GAT GGCCTGCCTGCCCGGCAACGG GATGCGGACGGACTG TERM 2511 3384485 - 3384451 - R 79 -14.3 -2.91144 | overlap 3384448 GGAGGCGGGAAACCA GTCCGGGGAGGC-GGCC GAT GGCCTGCCTGCCCGG-C AACGGGATGCGGACG TERM 2512 3384652 - 3384615 - R 72 -11.1 -3.37975 | overlap 3384605 3384616 ACGGACCAGCGACAA CCCGCCAGGCACGCGGC CGAC GCCACGGCCCTGCCGGA GCCCAACTCAGTCAG Rmet_3123 3385850 - 3384660 - | cell division protein FtsZ TERM 2513 3385216 - 3385255 + g 75 -12.2 -3.55444 | opp_overlap 3385224, overlap 3385219 ATCACCGTCTTCACG TCTTCAAAGTCGACGTTC ACGA GACCGTCGACATTGATGA TTTCGGCGATGCCAG TERM 2514 3385247 - 3385224 - G 72 -11 -3.54424 | opp_overlap 3385219 3385216 CTTCACGTCTTCAAA GTCGACGTTC ACGA GACCGTCGAC ATTGATGATTTCGGC TERM 2515 3385916 - 3385869 - R 74 -3.3 -4.82901 | overlap 3385882 TGCCTCCGAGAAAAA TCAGTCCCCAAACGCTGCAGC CTCCCC GCCGCAACCCTTGGTTCCTGA ACAAGAAACTATCAA TERM 2516 3386055 - 3386021 - R 75 -2.9 -4.88918 | gap 1, overlap 3386022 3386023 TCACGTCAAAGAAAA CCTGACCGGCAAATTC ATCA GAAGTTGCCGA-CAAA CCATTCCTTCATGCG Rmet_3124 3387270 - 3386038 - | cell division protein FtsA Rmet_3125 3388169 - 3387267 - | cell division protein FtsQ ddl 3389183 - 3388200 - | D-alanine--D-alanine ligase TERM 2517 3388992 - 3388976 - G 78 -4.4 -4.84359 | gap 1, overlap 3388987 GCAGCGCGATAAAAA CGC-GGT CGAA ACCTGCG GCAGCCAGTTCGCTG murC 3390595 - 3389180 - | UDP-N-acetylmuramate--L-alanine ligase TERM 2518 3390432 - 3390476 + g 72 -12.8 -3.14564 | opp_overlap 3390456 3390460 TCCGCGTCGTGGCCA TG-AGCCACGCGCGCGCCGAGC GAA GCCAGGCGC-CGCGTGGCGGCA TTGCTGCCCACGTCG murG 3391676 - 3390606 - | N-acetylglucosaminyl transferase Rmet_3129 3392914 - 3391673 - | cell cycle protein murD 3394425 - 3392911 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Rmet_3131 3395645 - 3394476 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Rmet_3132 3397061 - 3395661 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 2519 3396434 - 3396390 - G 91 -16.3 -3.61178 | opp_overlap 3396390 GGCATCGACCGGAAA CACGGCCACGCCATCGGCGGG CAG CGCGGCGATGGCGCTGGCGTG TTCATGCGCCACGGC TERM 2520 3396390 - 3396434 + g 82 -15.8 -3.14132 | opp_overlap 3396390 GGCATCGACCGGAAA CACGGCCA-CGCCATCGGCGGG CAG CGCGGCGATGGCGCTGG-CGTG TTCATGCGCCACGGC TERM 2521 3396668 - 3396712 + g 72 -13.5 -3.10464 | opp_overlap 3396684, overlap 3396683 3396710 GACGATCGCCTTCAC CCACGGCCGCGGCAAAGATCG CCG CGATCATTTCCTTGACCGTGG TCTTGCCATTGCTGC murE 3398605 - 3397058 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 2522 3398499 - 3398474 - G 71 -10.3 -3.67558 | opp_overlap 3398479, overlap 3398465 CACATAGGCGAAGAA CACGTCGCCCG GTTG CAGGCGGCGCG TATCGCCGGTCAACT TERM 2523 3398479 - 3398519 + g 71 -7.5 -4.08216 | gap 1, opp_overlap 3398465 3398474 AGGCGAAGAACACGT CGCCCGGTTG-CAGGCGG CGCGTA TCGCCGGTCAACTGCGCG TTTTCCGGGGCGTGC Rmet_3134 3400419 - 3398602 - | peptidoglycan synthetase FtsI Rmet_3135 3400733 - 3400416 - | cell division protein, FtsL -like protein mraW 3401707 - 3400730 - | S-adenosyl-methyltransferase MraW TERM 2524 3401500 - 3401471 - G 70 -14.4 -2.52464 | gap 1, opp_overlap 3401474, overlap 3401453 3401474 CGCGTGCTCAATGGA GAAGCGGGCATCC TTGAT GG-TGCCCGCTTC TGCGATTGCTGCCGG TERM 2525 3401474 - 3401497 + g 70 -11.7 -3.37464 | opp_overlap 3401453 3401471 3401474 GTGCTCAATGGAGAA GCGGGCATC CTTGAT GGTGCCCGC TTCTGCGATTGCTGC Rmet_3137 3402170 - 3401715 - | cell division protein MraZ TERM 2526 3402506 - 3402464 - R 72 -12.8 -3.09327 | opp_overlap 3402467 CTACCGGAGGGAATA CTGCCGACAGCGCGAAAC GCCATCG GTTTCACGCCGTCGGGAA GGATACAACGTTTTG Rmet_3138 3403265 - 3402642 - | putative ubiquinone biosynthesis protein TERM 2527 3403641 - 3403612 - g 78 -4.2 -4.77438 | gap 1, opp_overlap 3403613 3403630, overlap 3403613 3403614 ACCCAGCATGAAAAA GTCGCTTCTCGCG CTTGC CGCGATGAGCG-C GTTTGCCACAGCTGC Rmet_3139 3403550 - 3403813 + | hypothetical protein TERM 2528 3403961 - 3403983 + T 91 -19.2 -3.18264 | opp_overlap 3403961 3403964, overlap 3403964 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2529 3403983 - 3403961 - T 90 -19.2 -3.07816 | opp_overlap 3403961 3403964, overlap 3403964 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 2530 3403964 - 3403980 + T 93 -15.1 -3.73647 | opp_overlap 3403961 3403964, overlap 3403961 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 2531 3403980 - 3403964 - T 90 -15.1 -3.68569 | opp_overlap 3403964 3403961, overlap 3403961 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_3140 3404207 - 3403992 - | hypothetical protein Rmet_3141 3405094 - 3404261 - | ATPase Rmet_3142 3406530 - 3405091 - | integrase catalytic subunit Rmet_3143 3407103 - 3406642 - | hypothetical protein Rmet_3144 3407226 - 3408314 + | porin TERM 2532 3408341 - 3408356 + F 100 -11.8 -5.4505 | CATCGTTCCTTTCAA GGCGCC CACG GGCGCC TTTTTTCTTGCCACA TERM 2533 3408464 - 3408450 - f 76 -12.8 -3.32343 | opp_overlap 3408448 3408447 CCGATACCGGGACAA CCGGCC CTT GGCCGG CCCTTATACGGAGAC Rmet_3145 3408486 - 3409487 + | hypothetical protein TERM 2534 3409555 - 3409498 - f 76 -14.4 -2.61727 | opp_overlap 3409520, overlap 3409520 ACTGACGACAACCGA TCGTGGCC-GGGCAAGGCATATACTTGA AATA TCAAGTTTTTGCC-TGCCCTAACCACGA TGCCCAATCCTTCCT TERM 2535 3409520 - 3409533 + F 76 -5.3 -4.66609 | opp_overlap 3409498 3409520 CGGGCAAGGCATATA CTTGA AATA TCAAG TTTTTGCCTGCCCTA TERM 2536 3409630 - 3409583 - g 82 -16.2 -3.13403 | overlap 3409581 3409616 CCTCTGCCAGCAATA CCGACGAGCCGGCGCCGGTC GATCTGGA GACCAGCGCCGGCGACTCGG AGCATGAGGCGCTGC Rmet_3146 3409555 - 3410061 + | MarR family transcriptional regulator Rmet_3147 3410058 - 3410519 + | hypothetical protein Rmet_3148 3412218 - 3410536 - | acyl-CoA synthetase Rmet_3149 3413101 - 3412400 - | TetR family transcriptional regulator Rmet_3150 3414288 - 3413131 - | putative zinc protease protein TERM 2537 3414282 - 3414229 - G 71 -12.5 -3.21099 | gap 4 GCCGGCCACCAGCAA CGCCGCGCCGAGCACCGCCAGGGCACT CGCC AG-GCGCCGGCGG-GC-CGGC-CAGCG GATCATGATGCCAGC Rmet_3151 3416390 - 3414285 - | molybdopterin oxidoreductase Rmet_3152 3416666 - 3416415 - | hypothetical protein Rmet_3153 3416711 - 3417907 + | extracellular ligand-binding receptor Rmet_3154 3419030 - 3417966 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_3155 3420025 - 3419027 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_3156 3420971 - 3420042 - | binding-protein-dependent transport systems inner membrane component Rmet_3157 3421952 - 3420975 - | binding-protein-dependent transport systems inner membrane component Rmet_3158 3423714 - 3422107 - | extracellular solute-binding protein TERM 2538 3424038 - 3424052 + H 95 -12.8 -4.18161 | opp_overlap 3424021 3424036 3424037 CGACCCATGACAAGC CGCGGC GCC GCCGCG TTTTGGCGCTTTGTG Rmet_3159 3424124 - 3425317 + | peptidase M20D, amidohydrolase TERM 2539 3425308 - 3425325 + F 74 -5.5 -4.44548 | overlap 3425301 GGAGAAGTGGCTGGC GCCGG CCTGATTC CCGGC TTTTCCTTCCGTATA TERM 2540 3426312 - 3426351 + G 70 -11.4 -3.33261 | gap 1 CCCCAAGCCGTCGAA GGGCATTACGTAGCCACCC ATT GGCTGGCTACGTTC-GCCC TTCTGGCCCTTACGG Rmet_3160 3425358 - 3426383 + | hypothetical protein Rmet_3161 3427310 - 3426390 - | hypothetical protein TERM 2541 3427564 - 3427530 - R 90 -14.4 -3.53091 | opp_overlap 3427536, overlap 3427531 3427536 ACCGCGCCGGCCAAA GCAAAACCCCCAGC TTATGGG GCTGGGGGTTTTGG GTATAAGAGCCTGGC TERM 2542 3427563 - 3427531 - R 86 -17.9 -2.71712 | opp_overlap 3427536, overlap 3427530 3427536 CCGCGCCGGCCAAAG CAAAACCCCCAGC TTATGGG GCTGGGGGTTTTG GGTATAAGAGCCTGG TERM 2543 3427558 - 3427536 - R 95 -12 -4.54727 | opp_overlap 3427536, overlap 3427531 3427530 CCGGCCAAAGCAAAA CCCCCAGC TTATGGG GCTGGGGG TTTTGGGTATAAGAG TERM 2544 3427536 - 3427558 + r 100 -13.4 -4.2349 | opp_overlap 3427536 3427531 3427530 CCGGCCAAAGCAAAA CCCCCAGCTT ATG GGGCTGGGGG TTTTGGGTATAAGAG TERM 2545 3430190 - 3430201 + r 71 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 2546 3430744 - 3430777 + r 75 -2.5 -4.90266 | TCTCGCGTTTGTGCC GTATTCCAAGTCATC TTTC GATCACTTTAAATAC TTTTTGGTTGATACA TERM 2547 3430949 - 3430903 - R 95 -20.4 -3.01712 | opp_overlap 3430909 3430917 3430918, overlap 3430909 3430915 3430917 CGCCTGTTGGCAACA GCCAAAGACAAACACTCAGGCG CCT CGCCTGAATTCTTGTCTTTGAC TACAACCCCAAGGTA TERM 2548 3430943 - 3430909 - R 93 -14.4 -3.76373 | opp_overlap 3430909 3430917 3430918, overlap 3430903 3430915 3430917 TTGGCAACAGCCAAA GACAAACACTCAGGCG CCT CGCCTGAATTCTTGTC TTTGACTACAACCCC TERM 2549 3430909 - 3430943 + r 73 -10 -3.64703 | opp_overlap 3430909 3430903 3430915 3430917, overlap 3430917 3430918 TTGGCAACAGCCAAA GACAAACACTCAGGCG CCT CGCCTGAATTCTTGTC TTTGACTACAACCCC TERM 2550 3430937 - 3430915 - R 77 -8.4 -4.35646 | opp_overlap 3430909 3430917 3430918, overlap 3430909 3430903 3430917 ACAGCCAAAGACAAA CACTCAGGCG CCT CGCCTGAATT CTTGTCTTTGACTAC TERM 2551 3430917 - 3430935 + r 76 -8.8 -4.04188 | opp_overlap 3430915 3430909 3430903 3430917, overlap 3430909 3430918 AGCCAAAGACAAACA CTCAGGCG CCT CGCCTGAA TTCTTGTCTTTGACT TERM 2552 3430935 - 3430917 - R 80 -11 -3.77188 | opp_overlap 3430917 3430909 3430918, overlap 3430915 3430909 3430903 AGCCAAAGACAAACA CTCAGGCG CCT CGCCTGAA TTCTTGTCTTTGACT TERM 2553 3430918 - 3430934 + r 72 -12.3 -3.01428 | opp_overlap 3430917 3430915 3430909 3430903, overlap 3430917 3430909 GCCAAAGACAAACAC TCAGGCG CCT CGCCTGA ATTCTTGTCTTTGAC TERM 2554 3433036 - 3433048 + r 83 -2.7 -5.252 | AACGTTTCGTCAACA GTTTT TGC AGAAC TTTTTTCTGCCGGTC TERM 2555 3433281 - 3433256 - R 100 -17.7 -5.73978 | opp_overlap 3433256 ATCATAAAGAAAAAA TGGGCCGGAAA TAAC TTTCCGGCCCA TTTAATAACCCTTGA TERM 2556 3433256 - 3433281 + r 100 -17.7 -3.74747 | opp_overlap 3433256 ATCATAAAGAAAAAA TGGGCCGGAAA TAAC TTTCCGGCCCA TTTAATAACCCTTGA Rmet_3162 3434101 - 3433325 - | enoyl-CoA hydratase TERM 2557 3434230 - 3434245 + H 70 -10.4 -3.51411 | overlap 3434226 CCCGTCTACTATTTG CCGACC GACT GGTCGG TTAATTTAAAGCGAT Rmet_3163 3434329 - 3435171 + | enoyl-CoA hydratase Rmet_3164 3435204 - 3435644 + | phenylacetic acid degradation protein PaaD Rmet_3165 3435738 - 3437042 + | phenylacetate-CoA ligase Rmet_3166 3438645 - 3437068 - | anaerobic nitric oxide reductase transcription regulator TERM 2558 3437099 - 3437137 + g 70 -11.7 -3.33737 | gap 1, overlap 3437100 GCACTCTTGCTGCCG CCTGGCTCGTCGCGCTTG ACGC CGAGC-CGGCGGGCCAGC TTGTGCAGATTGCTA TERM 2559 3437100 - 3437136 + g 74 -15.2 -2.59921 | gap 1, overlap 3437099 CACTCTTGCTGCCGC CTGGCTCGTCGCGCTTG ACGC CGAGC-CGGCGGGCCAG CTTGTGCAGATTGCT TERM 2560 3438835 - 3438859 + Gr 80 -8.5 -4.45544 | overlap 3438837 GAAACTATGGTTCTT GTTGATCGCCG TGC TGGCGGTCACC TTTTCCTTACTCGGC TERM 2561 3439356 - 3439339 - gR 70 -4.7 -4.45544 | overlap 3439340 3439341 CGCGATGAAGGAAAA CCCGCTG CCCT CGGCGGA GCGACGCGCTCGCCT Rmet_3168 3441808 - 3440951 - | uroporphyrinogen-III C-methyltransferase Rmet_3167 3438806 - 3441085 + | nitric oxide reductase large subunit Rmet_3169 3443301 - 3441820 - | cytochrome d1, heme region TERM 2562 3442561 - 3442539 - G 77 -12.6 -3.5936 | CGTAAACGGCTGAAA CGCGGGAGGA CTT CCCGCCCGCG CCCGTGACCGGATAG Rmet_3170 3444461 - 3443298 - | radical SAM family protein Rmet_3171 3444770 - 3444465 - | cytochrome c, class I TERM 2563 3444593 - 3444581 - G 73 -9.1 -3.86346 | opp_overlap 3444586 GGATGCTTTGAGAAA GCTGC GCA GCAGC CGCCTTGTCACCTTT Rmet_3172 3446440 - 3444791 - | cytochrome d1, heme region Rmet_3173 3447800 - 3446652 - | MltA Rmet_3174 3447890 - 3448087 + | hypothetical protein apaG 3448480 - 3448106 - | ApaG TERM 2564 3449141 - 3449122 - g 71 -10 -3.64487 | gap 1, overlap 3449123 CGAGACGCTGAACAA GCTGCGCGC CGT GCGC-CAGC GCATCGACGCGTACA Rmet_3176 3448550 - 3449350 + | ribulose-phosphate 3-epimerase Rmet_3177 3449372 - 3450112 + | phosphoglycolate phosphatase Rmet_3178 3450572 - 3452098 + | anthranilate synthase component I Rmet_3179 3452122 - 3452691 + | anthranilate synthase component II trpD 3452688 - 3453770 + | anthranilate phosphoribosyltransferase TERM 2565 3453971 - 3453944 - g 71 -12 -3.29511 | gap 1 CGCACTGCGCGACAA GATCGCGGCCGGC AAC GCCGGC-GTGATC GCCGAGGTCAAGAAA TERM 2566 3454070 - 3454045 - g 72 -11.1 -3.55563 | gap 1, overlap 3454049 AGGCCATCGCCGAAA GCTACGCCGCCC ATG GCGCGGCGT-GC CTGTCCGTGCTGACC Rmet_3181 3453777 - 3454589 + | indole-3-glycerol-phosphate synthase Rmet_3182 3454597 - 3455220 + | adenylate cyclase Rmet_3183 3455220 - 3455990 + | uracil-DNA glycosylase Rmet_3184 3456339 - 3456052 - | acylphosphatase TERM 2567 3457286 - 3457296 + G 80 -4.6 -4.77438 | TGATGATGTCGATGT CCGG CGG CTGG TTTTTCGTGGTCGCT Rmet_3185 3456670 - 3458415 + | binding-protein-dependent transport systems inner membrane component Rmet_3186 3458426 - 3459772 + | ABC transporter-related protein TERM 2568 3459783 - 3459841 + T 74 -13.1 -3.19192 | overlap 3459775 3459774 TCTAGGTCAGCGTCA ATGCCGCGGGTTTTCTCTCCTCGCCCG CCACA TGGGAGAGGAGAGAGAACCCGTCACGA TTCCGTTCGATCACC Rmet_3187 3462224 - 3459852 - | protein of unknown function DUF893, YccS/YhfK Rmet_3188 3464124 - 3462310 - | peptidase M61 TERM 2569 3463450 - 3463468 + g 81 -13.2 -3.65046 | opp_overlap 3463446 CGGCTCGAACAGCTT GATCTGCG CCT CGCAGATC TTCTTCAGGTCGCGG Rmet_3189 3465190 - 3464189 - | zinc-binding alcohol dehydrogenase TERM 2570 3465247 - 3465268 + r 89 -17.3 -3.14211 | opp_overlap 3465247 3465261 GCGCGGAAATGCAAA GCGGCCGGT AGCA ACCGGCCGC TTCATACAGCCGGAT TERM 2571 3465268 - 3465247 - R 100 -17.3 -3.84451 | opp_overlap 3465247, overlap 3465261 GCGCGGAAATGCAAA GCGGCCGGT AGCA ACCGGCCGC TTCATACAGCCGGAT TERM 2572 3465287 - 3465300 + r 70 -3.7 -4.62085 | opp_overlap 3465277, overlap 3465271 ATACAGCCGGATGGG GTCCG GCGT CGGTC TTATTTTTTCAGGCT Rmet_3190 3466059 - 3465301 - | putative thiol:disulfide interchange protein Rmet_3191 3467596 - 3466172 - | hypothetical protein TERM 2573 3467608 - 3467635 + H 77 -4.1 -4.95547 | overlap 3467609 GCATTGCCGTCAAGG CGACCTGCG CCGTCCGGTC CGCAGGTCA TTTTCTTCTTATCCC TERM 2574 3468362 - 3468378 + G 78 -4.3 -4.74013 | ATTATTTCGACCGCC GTGCCGG CTT CCAGTAC TTTTGTCTATTTCGG Rmet_3192 3467915 - 3468733 + | hypothetical protein Rmet_3193 3469048 - 3470139 + | translation-associated GTPase TERM 2575 3470180 - 3470206 + T 100 -21 -5.27335 | opp_overlap 3470180 CCGGACCATAAAAAA CGCCCACAACCT CCA AGGTTGTGGGCG TTTTTGTTTCGGCCA TERM 2576 3470206 - 3470180 - T 100 -21 -5.31275 | opp_overlap 3470180 CCGGACCATAAAAAA CGCCCACAACCT CCA AGGTTGTGGGCG TTTTTGTTTCGGCCA Rmet_3194 3470429 - 3470244 - | hypothetical protein Rmet_3195 3470972 - 3470472 - | hypothetical protein Rmet_3196 3472096 - 3470969 - | hypothetical protein TERM 2577 3471198 - 3471178 - G 71 -13.9 -2.73364 | overlap 3471146 TGGCCAGCGCAAGCA CGCCGGCCG TGA CCGCCGGCG CCATCACCATCAGGC Rmet_3197 3473106 - 3472093 - | hypothetical protein TERM 2578 3472688 - 3472646 - G 74 -13.4 -3.19642 | gap 2 AGCACGATCCACCAA TGC-GGCGCAGCCC-GTGCG GCCAG CGCCCAGGGCAGCGCCAGCA GCGTCCAGAGCGCGA Rmet_3198 3473199 - 3474053 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Rmet_3199 3474346 - 3474104 - | hypothetical protein TERM 2579 3474277 - 3474225 - G 79 -11.1 -3.85698 | overlap 3474202 CGTCCGGTGTAGAAA GCGGCCAGCGCACCCGCCGCGCC CAGCAGT AGCGCGGCTGGCAGGCTGACGAC GCGTCCGGACGGATG TERM 2580 3475032 - 3475054 + G 71 -7.6 -4.08394 | GTCGATGGCGGCCGC TGCGGTTCGC CTG GCGCAGCGCA TTTTCGAGAGCGTCT hemA 3474463 - 3475815 + | glutamyl-tRNA reductase TERM 2581 3476285 - 3476261 - g 72 -11.3 -3.53091 | opp_overlap 3476253 ACCTGTTGCTCGAAA TCCGCGCCGGC ACT GGCGGCGAGGA AAGCGCGCTTTTCGC prfA 3475918 - 3477000 + | peptide chain release factor 1 Rmet_3202 3477163 - 3477486 + | outer membrane protein TERM 2582 3477598 - 3477552 - f 84 -8.8 -4.5442 | gap 1, opp_overlap 3477564, overlap 3477564 GCGCTAATCACAAAA TGCCGCGCAAAACCCCGTCGG GATGTT CCGACGGGGTTTTTTGCAA-A CTGGCGTACCGGTTC TERM 2583 3477564 - 3477587 + F 100 -16 -5.02074 | opp_overlap 3477552 3477564 AAATGCCGCGCAAAA CCCCGTCGGG ATGT TCCGACGGGG TTTTTTGCAAACTGG TERM 2584 3477587 - 3477564 - f 95 -15.3 -4.0896 | opp_overlap 3477564, overlap 3477552 AAATGCCGCGCAAAA CCCCGTCGG GATGTT CCGACGGGG TTTTTTGCAAACTGG Rmet_3203 3477574 - 3478506 + | HemK family modification methylase Rmet_3204 3478583 - 3478936 + | glutaredoxin-like protein Rmet_3205 3478968 - 3479582 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rmet_3206 3479855 - 3479649 - | hypothetical protein TERM 2585 3479963 - 3479982 + r 76 -10 -3.73224 | ATTCGCAACGTATTC GCGCATGT ATAT ACGTGCGC TTTACTCACACATCC Rmet_3207 3481535 - 3480012 - | aldehyde dehydrogenase TERM 2586 3481329 - 3481296 - G 72 -10.9 -3.53224 | gap 1, opp_overlap 3481312, overlap 3481297 CAGCGCCTCGCCAAA GCGCCGCACCACCTCG CCC CGCGCTGGCGCGG-GC GTCAGCGCCCAGGTG Rmet_3208 3482725 - 3481532 - | saccharopine dehydrogenase Rmet_3209 3482874 - 3483323 + | AsnC family transcriptional regulator Rmet_3210 3483404 - 3484213 + | dihydrodipicolinate reductase Rmet_3211 3484989 - 3484237 - | putative signal peptide protein TERM 2587 3485559 - 3485543 - g 75 -7.9 -4.20769 | ACATGTTAAGACAAA GTGGCCG TGT CCGCCAC AGCGGCTCCACCGTG Rmet_3212 3485101 - 3485631 + | hypothetical protein Rmet_3213 3487185 - 3485617 - | Cl- channel, voltage gated TERM 2588 3487203 - 3487171 - G 93 -19.2 -3.00923 | overlap 3487164 GGGGAAGATGACAGA GGCTACCGGAGGCA TCCAG CGCCTCCGGCAGCC CTCAACTATACGCCC Rmet_3214 3488419 - 3487448 - | hypothetical protein Rmet_3215 3490031 - 3488529 - | acyl-CoA synthetase TERM 2589 3488596 - 3488620 + g 93 -17.9 -3.68351 | GCCAGCTTGCCCGTT TCGTCGCGCGG CAA CTGCGCGACGA TTTCGATCGTGCGCG TERM 2590 3490031 - 3490052 + g 70 -2.1 -4.63218 | AGAGGTCTGCGGCCA TGCGGGGTC TCCT GTCTGCGCA TTTTGTTGACCGAAC TERM 2591 3490870 - 3490848 - g 72 -13.4 -3.14132 | TCCCTTCCTGATGAA TGCCGTGCGC CAG GGGCACGGCA TCAGCCTGCTGCCGC Rmet_3216 3490156 - 3491076 + | LysR family transcriptional regulator TERM 2592 3491170 - 3491123 - f 79 -12.3 -3.53224 | CACTCGCCCTGCAAA CTTTCAATTCGCAAGCTATGA TCCATG TCATAACTTGCAACCTGAAAG TAAAAGAGCGAGGAG Rmet_3217 3491190 - 3491702 + | putative transcriptional regulator TERM 2593 3492653 - 3492678 + G 71 -12.6 -3.19157 | gap 1, overlap 3492673 GTGACTGGCATACCG CGCGCCGCACC GCCTG GGT-CGGCGCG TTGCTCGCCTTGCTG Rmet_3218 3491689 - 3493056 + | multi anti extrusion protein MatE TERM 2594 3493047 - 3493083 + T 72 -11.5 -3.39895 | opp_overlap 3493057, overlap 3493048 GGGGGAATGGTCGCC GCGCCACTAACGGCTGG TGG TCAGCCGCTAATGGCGA TTGGTTGATGGCGGC TERM 2595 3493048 - 3493082 + T 76 -15 -2.63723 | opp_overlap 3493057, overlap 3493047 GGGGAATGGTCGCCG CGCCACTAACGGCTGG TGG TCAGCCGCTAATGGCG ATTGGTTGATGGCGG Rmet_3219 3495538 - 3493103 - | carbohydrate-binding family V/XII protein Rmet_3220 3495806 - 3496948 + | metallophosphoesterase TERM 2596 3496967 - 3497023 + T 71 -9.4 -3.70902 | gap 1 TGGTGAGGGCGTAGG GCTG-GATGGTTTTCTCCCCTCTCCCA CAAG TGGGAGAGGGGAGCCAATCAAAACTGC TTTACCTATCAGCGC Rmet_3221 3498801 - 3497032 - | putative ABC transporter ATP-binding protein TERM 2597 3497925 - 3497941 + g 71 -4.3 -4.51174 | CCGATTCGCTGGCCT CTTCCTG CTT CAGGCGG TTTTCCTTCTGCTCC Rmet_3222 3498841 - 3499062 + | hypothetical protein Rmet_3223 3499104 - 3499601 + | hypothetical protein TERM 2598 3499597 - 3499586 - T 71 -7.2 -4.26188 | GCGAGAGATGGAAAA GCGC GGCG GCGC CTGAGAATCTCCCAG Rmet_3224 3500514 - 3499615 - | hypothetical protein Rmet_3225 3500875 - 3502674 + | diguanylate cyclase TERM 2599 3502839 - 3502806 - T 100 -18.3 -4.68424 | opp_overlap 3502813, overlap 3502813 TAAGGTACTCAAAAA GCAAAAAGGCCACGC TCTC GCGTGGCCTTTTCAC ATAATTCTTGGTGCC TERM 2600 3502832 - 3502813 - T 100 -15 -5.18355 | opp_overlap 3502813, overlap 3502806 CTCAAAAAGCAAAAA GGCCACGC TCTC GCGTGGCC TTTTCACATAATTCT TERM 2601 3502813 - 3502832 + T 100 -15 -4.17425 | opp_overlap 3502806 3502813 CTCAAAAAGCAAAAA GGCCACGC TCTC GCGTGGCC TTTTCACATAATTCT Rmet_3226 3503473 - 3502976 - | ClpXP protease specificity-enhancing factor Rmet_3227 3504116 - 3503505 - | glutathione S-transferase-like protein TERM 2602 3503735 - 3503763 + g 85 -11.8 -4.08692 | gap 1, opp_overlap 3503738, overlap 3503738 GCGTCAGGCGGTCAC GAATCGCG-GCGC GGGC GCGCTCGTGATTC TTTTCAGCGGCCTTG TERM 2603 3503738 - 3503760 + g 71 -7.7 -4.17048 | gap 1, opp_overlap 3503738, overlap 3503735 TCAGGCGGTCACGAA TCGCG-GCGC GGGC GCGCTCGTGA TTCTTTTCAGCGGCC TERM 2604 3503771 - 3503781 + g 70 -2.4 -4.67038 | CGTGATTCTTTTCAG CGGC CTT GCCC TTTTCGTTTTCCAGC TERM 2605 3504343 - 3504301 - R 100 -19.9 -5.07652 | gap 1 TCGCGTAAAACAAAA GGGCCGACGCGG-TGCTGCA CTGC TGCAACCTCCGCGCCGGCCC TTCGGCGGGCACCGC Rmet_3228 3505138 - 3504395 - | cytochrome c1 Rmet_3229 3506579 - 3505176 - | cytochrome b/b6-like protein Rmet_3230 3507199 - 3506582 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit Rmet_3231 3507419 - 3507853 + | large conductance mechanosensitive channel protein Rmet_3232 3508615 - 3507869 - | hypothetical protein TERM 2606 3508078 - 3508050 - G 71 -10.2 -3.6269 | overlap 3508048 CCACTCATATAAAGA TCCACGCCCGCG TCCAC CGCGGCCGCGAA GTACCCCTGCGCGCC Rmet_3233 3508636 - 3509832 + | peptidase S1 and S6, chymotrypsin/Hap TERM 2607 3509917 - 3509873 - T 89 -18.2 -2.9914 | gap 1, opp_overlap 3509885, overlap 3509885 CATCCGGCATAGATA TCAATACAAAAACCCCCGTCA GCAG TGACGGGGGTTTTTGT-TTGT GCTGGCTGGGAGAGA TERM 2608 3509906 - 3509885 - T 100 -15.9 -5.13344 | opp_overlap 3509885, overlap 3509873 ATATCAATACAAAAA CCCCCGTCA GCAG TGACGGGGG TTTTTGTTTGTGCTG TERM 2609 3509885 - 3509906 + T 100 -15.9 -5.40464 | opp_overlap 3509885 3509873 ATATCAATACAAAAA CCCCCGTCA GCAG TGACGGGGG TTTTTGTTTGTGCTG TERM 2610 3510273 - 3510238 - T 100 -24.2 -4.37658 | opp_overlap 3510243, overlap 3510243 AAGCCCCGGACAAAA CAAAACGCCGGCATCC GAAA GGATGCCGGCGTTCTG AAGCCAATCTGAAGC TERM 2611 3510243 - 3510268 + T 100 -20.5 -3.29263 | opp_overlap 3510238 3510243 CCGGACAAAACAAAA CGCCGGCATCC GAAA GGATGCCGGCG TTCTGAAGCCAATCT TERM 2612 3510268 - 3510243 - T 100 -20.5 -5.18371 | opp_overlap 3510243, overlap 3510238 CCGGACAAAACAAAA CGCCGGCATCC GAAA GGATGCCGGCG TTCTGAAGCCAATCT Rmet_3234 3511514 - 3510309 - | porin Rmet_3235 3512488 - 3511706 - | Sec-independent protein translocase TatC TERM 2613 3512030 - 3512045 + g 73 -11.8 -3.4072 | GTCCGTCGACATGTC CGCGCC AAGC GGCGCG TTGTAGTGCGCCATG tatB 3512997 - 3512491 - | sec-independent translocase TERM 2614 3512898 - 3512875 - G 75 -13.8 -2.91582 | GACGTCATTGATATA GCGCTGGGCG CGAC CGACCAGCGC GCCGACGGTCCGCGC tatA 3513332 - 3513099 - | twin argininte translocase protein A Rmet_3238 3513842 - 3513486 - | histidine triad (HIT) protein Rmet_3239 3514307 - 3513915 - | putative transmembrane protein hisE 3514732 - 3514364 - | phosphoribosyl-ATP pyrophosphatase Rmet_3241 3515136 - 3514729 - | phosphoribosyl-AMP cyclohydrolase Rmet_3242 3515909 - 3515139 - | imidazole glycerol phosphate synthase subunit HisF TERM 2615 3515921 - 3515950 + r 89 -16.4 -3.28712 | ACATGAGTTTCCTTG CCCGCCGTCGCC CGCATC GGCGACGGCTGG TTGTGGCGCGCGAGC Rmet_3243 3516714 - 3515971 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 3517547 - 3516894 - | imidazole glycerol phosphate synthase subunit HisH Rmet_3245 3518167 - 3517544 - | multiple antibiotic resistance (MarC)-related proteins hisB 3518836 - 3518249 - | imidazoleglycerol-phosphate dehydratase Rmet_3247 3519944 - 3518844 - | histidinol-phosphate aminotransferase hisD 3521315 - 3519981 - | histidinol dehydrogenase TERM 2616 3520156 - 3520144 - G 80 -4.7 -4.7254 | AGCGGCGACGAAAAA CGGGC GGT GCGCG AAGTGGGGAGCACGT hisG 3522027 - 3521353 - | ATP phosphoribosyltransferase catalytic subunit Rmet_3250 3523346 - 3522096 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Rmet_3251 3523660 - 3523415 - | BolA-like protein Rmet_3252 3524516 - 3523695 - | ABC-type multidrug transport system permease component Rmet_3253 3525463 - 3524513 - | ABC transporter-related protein Rmet_3254 3526015 - 3525719 - | sulfate transporter/antisigma-factor antagonist STAS TERM 2617 3526080 - 3526050 - R 95 -14.7 -4.09556 | gap 1 GAGATGGAAATGAAA CGCTCCCGCTCAGC GGTT GCAG-GCGGGAGCG AACGGCCATTGTAGA TERM 2618 3526127 - 3526101 - R 79 -14.5 -2.85999 | CCATTGTAGACCAGA TCGTTGCGACG TGGTG CGCCGCAACGA AATCCGGATCAGCCC Rmet_3255 3526762 - 3526136 - | toluene tolerance Rmet_3256 3527748 - 3526948 - | VacJ-like lipoprotein Rmet_3257 3528284 - 3527745 - | hypothetical protein Rmet_3258 3529096 - 3528320 - | hypothetical protein Rmet_3259 3529944 - 3529093 - | ABC transporter-related protein TERM 2619 3529938 - 3529954 + g 79 -6.5 -4.58395 | opp_overlap 3529937 GGTTCGGCACAGTAG CGGTCAC ATT GTCACCG TTTTTGGACAGTCCG Rmet_3260 3531197 - 3530079 - | hypothetical protein Rmet_3261 3531370 - 3531879 + | GCN5-related N-acetyltransferase TERM 2620 3531945 - 3531918 - T 100 -21.4 -4.57482 | opp_overlap 3531918 CCAGCCATAAACAAA CCCCCCGCAAGT TCGC ACTTGCGGGGGG TTTTGCTTTTGAACC TERM 2621 3531918 - 3531945 + T 100 -21.4 -4.67038 | opp_overlap 3531918 CCAGCCATAAACAAA CCCCCCGCAAGT TCGC ACTTGCGGGGGG TTTTGCTTTTGAACC gltD 3533436 - 3531973 - | glutamate synthase subunit beta Rmet_3263 3538443 - 3533548 - | glutamate synthase (NADH) large subunit Rmet_3264 3539325 - 3538582 - | hypothetical protein Rmet_3265 3540560 - 3539412 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein aroB 3541720 - 3540614 - | 3-dehydroquinate synthase aroK 3542406 - 3541717 - | shikimate kinase TERM 2622 3542491 - 3542467 - R 100 -18.6 -5.19879 | opp_overlap 3542461 CGCCAAATAGAAAAA GGCCGCGTCG TTTTG CGACGCGGCC TGCCAGTCTACTGCA Rmet_3268 3544668 - 3542536 - | type II and III secretion system protein TERM 2623 3544662 - 3544696 + g 74 -2.2 -4.79451 | overlap 3544679 TGACCCATCGTGCCG TGATCATGCC-GATGC CTCCA GCTTCAGGC-TGGTCA TTTTCTCTTTCCACT Rmet_3269 3545204 - 3544665 - | pilus assembly protein, PilQ Rmet_3270 3545872 - 3545201 - | pilus assembly protein, PilO TERM 2624 3545578 - 3545588 + g 72 -8.2 -4.11216 | overlap 3545577 GTTGGTGCTCGGCAA GCGC CAC GCGC TTTTCAACCTCGGCC TERM 2625 3545893 - 3545920 + r 90 -6.1 -5.18726 | opp_overlap 3545880, overlap 3545905 GACCTTTCGACCAGC GGGCGTGCCCG CGGCGT CGGAGGCGCCC TTTTTCTTGTCGCCC Rmet_3271 3546519 - 3545875 - | fimbrial assembly TERM 2626 3545905 - 3545919 + g 71 -9.2 -3.70512 | opp_overlap 3545880, overlap 3545893 AGCGGGCGTGCCCGC GGCGTC GGA GGCGCC CTTTTTCTTGTCGCC Rmet_3272 3547622 - 3546537 - | type IV pilus assembly protein PilM TERM 2627 3547596 - 3547570 - G 72 -13 -3.11768 | CTAGACGACCCAATA TCTACGCCGACC GTA GTCCGGCGTAGA AGACCCGACAAGATG Rmet_3273 3547975 - 3547709 - | hypothetical protein TERM 2628 3548392 - 3548367 - g 77 -11.1 -3.7282 | opp_overlap 3548366, overlap 3548368 CGATGTCATGAAGAA GGCCGTGCTCG CGAT CGAGGACGACC GGTTCTACGAGCACG TERM 2629 3550339 - 3550323 - g 81 -9.3 -4.2558 | GACGCTCGAGGAAAA CGCCGGC GGC GCAGGCG TGGCATCTGTGGGCC Rmet_3274 3548077 - 3550455 + | penicillin-binding protein 1A TERM 2630 3550472 - 3550503 + T 88 -13.9 -3.57462 | gap 1, opp_overlap 3550479, overlap 3550479 3550502 CGGCACCGCCTCCAA CGAAAAA-CCGGCC CTCGC GGCCGGTTTTTTCG TTTCGGCGTGGCGTG TERM 2631 3550479 - 3550495 + T 100 -10.8 -5.37593 | opp_overlap 3550479, overlap 3550472 GCCTCCAACGAAAAA CCGGCC CTCGC GGCCGG TTTTTTCGTTTCGGC TERM 2632 3550495 - 3550479 - T 100 -10.8 -4.8622 | opp_overlap 3550479 3550472 GCCTCCAACGAAAAA CCGGCC CTCGC GGCCGG TTTTTTCGTTTCGGC cyaY 3550863 - 3550528 - | frataxin-like protein Rmet_3276 3551267 - 3552526 + | diaminopimelate decarboxylase TERM 2633 3552585 - 3552615 + T 100 -17 -4.07133 | opp_overlap 3552590, overlap 3552590 GCTCTCGGCCAAAGC AAAAAGGGCGACGT TCT ACGTCGCCCTTTTC TTCTTTATGGCACTG TERM 2634 3552590 - 3552610 + T 100 -16.9 -5.05116 | opp_overlap 3552590, overlap 3552585 CGGCCAAAGCAAAAA GGGCGACGT TCT ACGTCGCCC TTTTCTTCTTTATGG TERM 2635 3552610 - 3552590 - T 100 -16.9 -4.98531 | opp_overlap 3552590 3552585 CGGCCAAAGCAAAAA GGGCGACGT TCT ACGTCGCCC TTTTCTTCTTTATGG Rmet_3277 3553294 - 3552620 - | putative sulfite oxidase subunit YedZ Rmet_3278 3554304 - 3553294 - | putative sulfite oxidase subunit YedY TERM 2636 3554050 - 3554073 + g 70 -2.4 -4.65895 | gap 1, overlap 3554055 AAAGTTGTTGTAGGT CGTGACGTCCT CAT ACGACGT-GCG TTTTTCCGTCACCGC Rmet_3279 3555208 - 3554375 - | putative transmembrane transcriptional regulator (anti-sigma factor) Rmet_3280 3555741 - 3555208 - | sigma-24 (FecI-like) TERM 2637 3555644 - 3555617 - G 77 -13.4 -3.36175 | overlap 3555605 3555618 AATCTCCAGCGATAA CGCAGGGCACGC TCAA GCGTGTCCTGCA CGAGATCGTCGGCCA TERM 2638 3555643 - 3555618 - G 74 -14.7 -2.61383 | overlap 3555605 3555617 ATCTCCAGCGATAAC GCAGGGCACGC TCAA GCGTGTCCTGC ACGAGATCGTCGGCC Rmet_3281 3556196 - 3555771 - | hypothetical protein TERM 2639 3556217 - 3556237 + r 80 -11.8 -3.84185 | TCTCCTTCTTCAGGG CGGTGCCG ACAGC CGGCGCCG TTCTCTTTCAGTAAA TERM 2640 3556441 - 3556460 + r 82 -15 -3.25223 | opp_overlap 3556441 TCAGAAGACAAAAAA GCCTGCCG GAAT CGGCAGGC TTCGTCATCTGGATA TERM 2641 3556460 - 3556441 - R 100 -15 -5.5208 | opp_overlap 3556441 TCAGAAGACAAAAAA GCCTGCCG GAAT CGGCAGGC TTCGTCATCTGGATA Rmet_3282 3557713 - 3556490 - | cytochrome c assembly protein TERM 2642 3557114 - 3557104 - G 82 -6.8 -4.6008 | AAAAGAGAACGAAAA CCTC ATA GAGG TTCGAGATTGGAATA TERM 2643 3557728 - 3557744 + r 74 -5.7 -4.57353 | overlap 3557730 TGGCATTCCTGCTCT TTGGCGC TAC GCGCCTG TTTTATCTGCTGCGC TERM 2644 3557730 - 3557742 + r 78 -10.5 -3.89814 | overlap 3557728 GCATTCCTGCTCTTT GGCGC TAC GCGCC TGTTTTATCTGCTGC Rmet_3283 3560068 - 3557816 - | ResB-like protein TERM 2645 3560135 - 3560169 + r 78 -13.7 -3.21695 | gap 1, opp_overlap 3560135 CGCCGGAAAACAAAA GAGGGTGGACGTGCTT TGGC AAGCAGG-CCACCCTC TTCGATTGCTGCTGG TERM 2646 3560169 - 3560135 - R 100 -13.7 -5.07652 | gap 1, opp_overlap 3560135 CGCCGGAAAACAAAA GAGGGTGGACGTGCTT TGGC AAGCAGG-CCACCCTC TTCGATTGCTGCTGG Rmet_3284 3560897 - 3560238 - | cytochrome c, class I Rmet_3285 3561160 - 3561912 + | GTPase EngB TERM 2647 3561967 - 3561946 - f 100 -10.1 -5.77853 | overlap 3561947 3561962 AACCGGCAAAAAAAA GCCCCGTTG CGAA CAACGGGGA CGAACTTTCCCGCCG TERM 2648 3561966 - 3561947 - f 95 -13.6 -4.05085 | overlap 3561946 3561962 ACCGGCAAAAAAAAG CCCCGTTG CGAA CAACGGGG ACGAACTTTCCCGCC TERM 2649 3562506 - 3562448 - g 72 -8.2 -4.07687 | gap 3, overlap 3562451 ATCCGTCGCTGAAAA CACCTG-ACGGCATCGAGGCCACCAACCC GGAA GGCCTGGTG-CCTCG-CGCCGTGCGAGCG CTGAAGGATCGCTTT Rmet_3286 3562183 - 3563175 + | delta-aminolevulinic acid dehydratase TERM 2650 3563335 - 3563306 - g 78 -14.3 -3.18264 | gap 1 TTTGGCACCGAGGAA GTCACGCCAG-CGC CCA GCGTCTGGCGAGAC AGCCTGATGGCGCTG Rmet_3287 3563183 - 3564364 + | Mg2+ transporter protein, CorA-like protein Rmet_3288 3566257 - 3564383 - | cytochrome c biogenesis protein, transmembrane region TERM 2651 3565173 - 3565191 + g 74 -11 -3.56643 | ATCAGGGCCGCTCCG CCGGTGAT GGC ATCGCCGG TTTGCGCGATATACG Rmet_3289 3566729 - 3566349 - | CutA1 divalent ion tolerance protein TERM 2652 3566787 - 3566766 - R 100 -15.9 -5.19275 | opp_overlap 3566765 3566764 3566768 AGGCACAAAACAAAA GAGCCAGGC AAAA GCCTGGCTC GATTGTAGTGCCGTG rplQ 3567237 - 3566842 - | 50S ribosomal protein L17 TERM 2653 3567348 - 3567388 + r 70 -10.4 -3.44146 | gap 1, overlap 3567352 ATGCCTGTGGCGCGT GCGAAG-TGTGGGGCGGCG TTAC CGCTGCCCCACGCCTTCAA TTACTTCTCCAGACC TERM 2654 3567352 - 3567383 + r 85 -15.8 -3.25356 | overlap 3567348 CTGTGGCGCGTGCGA AGTGTGGGGCGGCG TTAC CGCTGCCCCACGCC TTCAATTACTTCTCC Rmet_3291 3568369 - 3567389 - | DNA-directed RNA polymerase subunit alpha TERM 2655 3568097 - 3568081 - G 70 -7.9 -4.03234 | opp_overlap 3568081 CCTTGCGCAGAGAAA CCGTGAC TTC GTCGCGG TTGTGCAGCTTGAAC TERM 2656 3568485 - 3568458 - R 93 -16.2 -3.63991 | opp_overlap 3568446 3568445, overlap 3568475 TACGATGGGCAATAA GCCCGGCGCGCC ACAA AGCGCGTCGGGC TGAAAGCGAAGCCTT rpsD 3569168 - 3568545 - | 30S ribosomal protein S4 TERM 2657 3569387 - 3569363 - R 100 -17.3 -4.68645 | GACGCAAAACGAAAA CCTGCTGCAAT CAG ATTGCAGCAGG TGAACGCGCGATACT Rmet_3293 3569863 - 3569462 - | 30S ribosomal protein S11 rpsM 3570253 - 3569888 - | 30S ribosomal protein S13 rpmJ 3570389 - 3570273 - | 50S ribosomal protein L36 infA 3570639 - 3570421 - | translation initiation factor IF-1 secY 3572007 - 3570664 - | preprotein translocase subunit SecY rplO 3572491 - 3572057 - | 50S ribosomal protein L15 rpmD 3572693 - 3572511 - | 50S ribosomal protein L30 rpsE 3573222 - 3572704 - | 30S ribosomal protein S5 TERM 2658 3573190 - 3573201 + g 73 -5.8 -4.45151 | GCCGTCGTCGCGTTC GTCC TGTT GGAC TTTTGCTTGCATCTT rplR 3573603 - 3573244 - | 50S ribosomal protein L18 TERM 2659 3573573 - 3573588 + g 71 -3.9 -4.49316 | GGGTCTGACGTGCAC GGCGC AAACGA GCGTC TTTCTTGTTCATCAT rplF 3574145 - 3573612 - | 50S ribosomal protein L6 rpsH 3574550 - 3574155 - | 30S ribosomal protein S8 rpsN 3574883 - 3574578 - | 30S ribosomal protein S14 rplE 3575435 - 3574893 - | 50S ribosomal protein L5 rplX 3575769 - 3575461 - | 50S ribosomal protein L24 rplN 3576147 - 3575779 - | 50S ribosomal protein L14 TERM 2660 3576403 - 3576363 - R 89 -11.3 -4.20918 | overlap 3576364 GGCAAGCGCAACAAA GCGGAAGTCCAGGATTATA GCA TATAACCCTGGACTTGCAA GTCATCAATACACTG TERM 2661 3576402 - 3576364 - R 80 -14.8 -3.12069 | overlap 3576363 GCAAGCGCAACAAAG CGGAAGTCCAGGATTATA GCA TATAACCCTGGACTTGCA AGTCATCAATACACT rpsQ 3576703 - 3576425 - | 30S ribosomal protein S17 Rmet_3309 3576894 - 3576700 - | 50S ribosomal protein L29 rplP 3577323 - 3576907 - | 50S ribosomal protein L16 rpsC 3578123 - 3577326 - | 30S ribosomal protein S3 rplV 3578462 - 3578133 - | 50S ribosomal protein L22 rpsS 3578747 - 3578472 - | 30S ribosomal protein S19 rplB 3579600 - 3578770 - | 50S ribosomal protein L2 TERM 2662 3579419 - 3579463 + g 70 -7.3 -3.9461 | overlap 3579408 3579414 3579431 TCGACCACGCGGTAG TGGTGCTTATGACCAC-CGCC CTTGT GGCGGGTGGTGATATG-ACCA TTGTTGTTACGACCC rplW 3579917 - 3579603 - | 50S ribosomal protein L23 rplD 3580534 - 3579914 - | 50S ribosomal protein L4 rplC 3581191 - 3580547 - | 50S ribosomal protein L3 Rmet_3318 3581973 - 3581461 - | flavin reductase-like, FMN-binding Rmet_3319 3583216 - 3581975 - | putative oxygenase subunit protein Rmet_3320 3584038 - 3583250 - | short chain dehydrogenase TERM 2663 3583922 - 3583895 - G 81 -12.7 -3.61715 | gap 1 CATCGGTCCCAACAA CGCCGCCACGCG CTCGC CGC-CGGCGGCG TCGATATCGAGAATC Rmet_3321 3585354 - 3584125 - | dienelactone hydrolase Rmet_3322 3585674 - 3586687 + | AraC family transcriptional regulator TERM 2664 3586723 - 3586742 + T 100 -13.6 -4.25104 | opp_overlap 3586723 ACCACAAAACAAAAA CGGCGAAC CGAA GTTCGCCG TTTTGCTGCAACAGG TERM 2665 3586742 - 3586723 - T 100 -13.6 -5.56263 | opp_overlap 3586723 ACCACAAAACAAAAA CGGCGAAC CGAA GTTCGCCG TTTTGCTGCAACAGG rpsJ 3587090 - 3586782 - | 30S ribosomal protein S10 TERM 2666 3587159 - 3587134 - R 100 -13.3 -4.36914 | overlap 3587135 GTGGCCCGGATAAAA GGGGACATGCC CGCG GGCATGTCCCA GGAAGATTGCTTAGT TERM 2667 3587158 - 3587135 - R 89 -16.8 -3.21934 | overlap 3587134 TGGCCCGGATAAAAG GGGACATGCC CGCG GGCATGTCCC AGGAAGATTGCTTAG Rmet_3324 3588360 - 3587170 - | elongation factor Tu TERM 2668 3588397 - 3588435 + r 100 -9.5 -4.78572 | overlap 3588399 CAGTCTGATTCGATT CTTTACACCGCCACGCA GATCA TGCGTGGCGGTACAGCG TTTTATTGCTTGCCC Rmet_3325 3590549 - 3588438 - | elongation factor G TERM 2669 3588776 - 3588786 + g 70 -4.6 -4.42238 | overlap 3588736 CCATCGAGCCGGCCA TGCG GAA CGCG TTTTCGTTCGAGTCC TERM 2670 3590641 - 3590610 - R 100 -16.6 -4.1891 | opp_overlap 3590591 3590636 CGCCCTTAACACAAA CGGGCGAGATGTGT AAAA ACACAGCCCGCCCG GCAACCAACAATGTT Rmet_3326 3591138 - 3590668 - | 30S ribosomal protein S7 TERM 2671 3590783 - 3590808 + g 85 -4.7 -5.0133 | AGTTCACCTGCCAGG CGCAGCG CCATCGACTTCT CGCTGCG TTTTTTCGCGGCCTC rpsL 3591723 - 3591346 - | 30S ribosomal protein S12 TERM 2672 3591784 - 3591753 - R 74 -3.7 -4.82901 | gap 1, overlap 3591755 TGGTTTTTACAAAAA CACCCCTC-TGCCA GCGGA CGACATGAGGGGCA ACTACGGGTTTCGGA Rmet_3328 3593919 - 3592027 - | ATP-dependent DNA helicase RecQ TERM 2673 3595597 - 3595635 + G 100 -21 -2.55392 | overlap 3595594 TGCTGACTGCCCGCT TCAGGCGTGCGGTGGCGG AGC CCGCCACCGCACGCTCCA TCACTTCGGTGGCTT Rmet_3329 3594114 - 3595661 + | GntR family transcriptional regulator Rmet_3330 3595965 - 3595636 - | cytochrome c553-like protein Rmet_3331 3597540 - 3595981 - | cytochrome d1, heme region TERM 2674 3597391 - 3597353 - G 77 -16.1 -2.54896 | gap 1, opp_overlap 3597361, overlap 3597349 GTGCCACGCAACGCA GCCTCGCTCTGCACAAGG CGGT CCTTGTGCAAGGCG-GGC CCCACATACCCGCCC TERM 2675 3597447 - 3597460 + g 76 -9.5 -4.08706 | opp_overlap 3597447, overlap 3597443 AATTGGCCTGATAGA GCGCG TCGG CGCGC TTTATCTCCTCGGCG Rmet_3332 3598140 - 3597685 - | hypothetical protein TERM 2676 3598163 - 3598182 + r 100 -15 -4.53303 | opp_overlap 3598163 CGGAAGCAAAAAAAA CCCGGCTC GGAT GAGCCGGG TTTTCTATACCGCTG TERM 2677 3598182 - 3598163 - R 100 -15 -5.95166 | opp_overlap 3598163 CGGAAGCAAAAAAAA CCCGGCTC GGAT GAGCCGGG TTTTCTATACCGCTG Rmet_3333 3602460 - 3598219 - | DNA-directed RNA polymerase subunit beta' rpoB 3606682 - 3602576 - | DNA-directed RNA polymerase subunit beta TERM 2678 3606629 - 3606656 + g 75 -7.8 -4.21812 | gap 1, overlap 3606630 CTGATGAACCGTCGC ACGC-TTCGCAAA GGA TTTGCGAATGCGC TTCTTTTCGGTGAAG TERM 2679 3606924 - 3606895 - R 71 -6.5 -4.27117 | gap 1, opp_overlap 3606889 3606909, overlap 3606891 3606889 GGTTCAGAAGACAAA CATCAGCAAC-CAC CTA GTGTGCCACTGATG TTTGGCTTCTGCTGA TERM 2680 3607084 - 3607054 - R 95 -11 -4.69622 | opp_overlap 3607064 ACAGAAGCGCAAAAA GGCTGGCGCCGGGA ATT TCCCTTTGCCAGCC CCATCCGCGTGCCCG rplL 3607493 - 3607119 - | 50S ribosomal protein L7/L12 TERM 2681 3607557 - 3607596 + r 88 -13.4 -3.61517 | CTATGCGACGGCTCA GGCGGCCGGGGCTTCCGC TTCC GCGGGAGCGCCTTCTGCC TTCTTGGCGGCAACT rplJ 3608075 - 3607554 - | 50S ribosomal protein L10 TERM 2682 3608354 - 3608314 - R 72 -13.9 -2.57132 | overlap 3608313 3608316 GCGGTCTTTGATAAC CAGCAGCACCTGCCGCGCA TTC CGCGCAACGGGCGCCACTG CCCAAAGCCATGCTC rplA 3609165 - 3608470 - | 50S ribosomal protein L1 rplK 3609597 - 3609166 - | 50S ribosomal protein L11 nusG 3610341 - 3609760 - | transcription antitermination protein NusG TERM 2683 3609824 - 3609841 + g 75 -6.9 -4.35742 | opp_overlap 3609816, overlap 3609828 CCGAAGATCGTGACC GTCACGC GCAG GCGCGAC TTTTCGTAGTTCACT secE 3610732 - 3610352 - | preprotein translocase subunit SecE TERM 2684 3610469 - 3610450 - G 71 -9.2 -3.76169 | opp_overlap 3610451, overlap 3610451 CGAAGACGAACACAA GGCCGGTC ATCT GACCGGCT TCCTTGCGCGTCGGC TERM 2685 3610451 - 3610468 + g 77 -12.7 -3.34895 | opp_overlap 3610451 3610450 GAAGACGAACACAAG GCCGGTC ATCT GACCGGC TTCCTTGCGCGTCGG TERM 2686 3610749 - 3610785 + r 79 -12.3 -3.51232 | opp_overlap 3610743 3610752, overlap 3610745 3610752 TTTCGCAAACGAGAC TAAGCCGCGTCACGA TTACCCC TCGCGACGCGGCTGA TTGATTTGGCAGGGG TERM 2687 3610752 - 3610782 + r 75 -14 -2.89569 | opp_overlap 3610743 3610752, overlap 3610749 3610745 CGCAAACGAGACTAA GCCGCGTCACGA TTACCCC TCGCGACGCGGC TGATTGATTTGGCAG TERM 2688 3610782 - 3610752 - R 89 -16.2 -3.35344 | opp_overlap 3610752 3610749 3610745, overlap 3610743 CGCAAACGAGACTAA GCCGCGTCACGA TTACCCC TCGCGACGCGGC TGATTGATTTGGCAG TERM 2689 3610935 - 3610908 - R 86 -14.2 -3.53343 | AACCCCTCTGGCAAA CGAACGCGGC CGGTTGAT GCCGCGTTCG CCAGTTCGACTAATA Rmet_3341 3612142 - 3610952 - | elongation factor Tu TERM 2690 3612797 - 3612763 - H 90 -14.4 -3.53091 | opp_overlap 3612769, overlap 3612764 3612769 ACCGCGCCGGCCAAA GCAAAACCCCCAGC TTATGGG GCTGGGGGTTTTGG GTATAAGAGCCTGGC TERM 2691 3612796 - 3612764 - H 86 -17.9 -2.71712 | opp_overlap 3612769, overlap 3612763 3612769 CCGCGCCGGCCAAAG CAAAACCCCCAGC TTATGGG GCTGGGGGTTTTG GGTATAAGAGCCTGG TERM 2692 3612769 - 3612791 + H 100 -13.4 -4.2349 | opp_overlap 3612764 3612763 3612769 CCGGCCAAAGCAAAA CCCCCAGCTT ATG GGGCTGGGGG TTTTGGGTATAAGAG TERM 2693 3612791 - 3612769 - H 95 -12 -4.54727 | opp_overlap 3612769, overlap 3612764 3612763 CCGGCCAAAGCAAAA CCCCCAGC TTATGGG GCTGGGGG TTTTGGGTATAAGAG TERM 2694 3615423 - 3615434 + H 71 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 2695 3615977 - 3616010 + H 75 -2.5 -4.90266 | TCTCGCGTTTGTGCC GTATTCCAAGTCATC TTTC GATCACTTTAAATAC TTTTTGGTTGATACA TERM 2696 3616182 - 3616136 - H 95 -20.4 -3.01712 | opp_overlap 3616142 3616150 3616151, overlap 3616142 3616148 3616150 CGCCTGTTGGCAACA GCCAAAGACAAACACTCAGGCG CCT CGCCTGAATTCTTGTCTTTGAC TACAACCCCAAGGTA TERM 2697 3616176 - 3616142 - H 93 -14.4 -3.76373 | opp_overlap 3616142 3616150 3616151, overlap 3616136 3616148 3616150 TTGGCAACAGCCAAA GACAAACACTCAGGCG CCT CGCCTGAATTCTTGTC TTTGACTACAACCCC TERM 2698 3616142 - 3616176 + H 73 -10 -3.64703 | opp_overlap 3616142 3616136 3616148 3616150, overlap 3616150 3616151 TTGGCAACAGCCAAA GACAAACACTCAGGCG CCT CGCCTGAATTCTTGTC TTTGACTACAACCCC TERM 2699 3616170 - 3616148 - H 77 -8.4 -4.35646 | opp_overlap 3616142 3616150 3616151, overlap 3616142 3616136 3616150 ACAGCCAAAGACAAA CACTCAGGCG CCT CGCCTGAATT CTTGTCTTTGACTAC TERM 2700 3616150 - 3616168 + H 76 -8.8 -4.04188 | opp_overlap 3616148 3616142 3616136 3616150, overlap 3616142 3616151 AGCCAAAGACAAACA CTCAGGCG CCT CGCCTGAA TTCTTGTCTTTGACT TERM 2701 3616168 - 3616150 - H 80 -11 -3.77188 | opp_overlap 3616150 3616142 3616151, overlap 3616148 3616142 3616136 AGCCAAAGACAAACA CTCAGGCG CCT CGCCTGAA TTCTTGTCTTTGACT TERM 2702 3616151 - 3616167 + H 72 -12.3 -3.01428 | opp_overlap 3616150 3616148 3616142 3616136, overlap 3616150 3616142 GCCAAAGACAAACAC TCAGGCG CCT CGCCTGA ATTCTTGTCTTTGAC TERM 2703 3618269 - 3618281 + H 83 -2.7 -5.252 | AGCGTTTCGTCAACA GTTTT TGC AGAAC TTTTTTCTGCCGGTC TERM 2704 3618348 - 3618368 + H 73 -9 -3.92324 | gap 1 CCCCGCAACCCTTGT CGCTGCTGC GTTT GCAGC-GCG TTTCGTGTTGCGAGG TERM 2705 3618457 - 3618443 - H 85 -6.4 -4.80396 | GAAAATATCTAAAAA GGCTCT TCC AAAGCC TGACTGGCTATCGCC Rmet_3342 3618584 - 3618970 + | hypothetical protein Rmet_3343 3619049 - 3620293 + | nucleoside recognition TERM 2706 3620415 - 3620435 + F 100 -14 -5.75342 | CTCGGTGGATTCCAA CCCGCGCA TCACC TGCGCGGG TTTTTTTTGCCCAAA TERM 2707 3622024 - 3622045 + G 73 -9.3 -3.84394 | overlap 3622031 3622040 TGCCTATGCTGCGCG GCTGGCGGG CAAC CCCGCGGGC TTTGCCTTCTGTCTC Rmet_3344 3620879 - 3622777 + | hypothetical protein Rmet_3345 3622892 - 3623170 + | hypothetical protein Rmet_3346 3623661 - 3623191 - | hypothetical protein Rmet_3347 3625423 - 3624125 - | hypothetical protein Rmet_3348 3626328 - 3625435 - | integrase catalytic subunit Rmet_3349 3626621 - 3626325 - | transposase IS3/IS911 TERM 2708 3626727 - 3626717 - R 71 -6.8 -4.21936 | TCGATAACTCCAAAA GCTC AAC GAGC TTAGGATCGGAGCAA Rmet_3350 3627178 - 3626774 - | hypothetical protein Rmet_3351 3628195 - 3627434 - | hypothetical protein TERM 2709 3628507 - 3628491 - g 71 -3.7 -4.57073 | GACCGGTTCCAAAAA CCTTC CACGTCT GAAGG ACCGGATCACTGAGG Rmet_3352 3628399 - 3629298 + | cytidine/deoxycytidylate deaminase family protein Rmet_3353 3630534 - 3629434 - | IS4 family transposase Rmet_3354 3630721 - 3631350 + | CMP/dCMP deaminase, zinc-binding Rmet_3355 3631553 - 3631792 + | hypothetical protein Rmet_3356 3631986 - 3633089 + | ATP-binding region, ATPase-like protein Rmet_3357 3633099 - 3633656 + | hypothetical protein TERM 2710 3634000 - 3634028 + G 75 -6.5 -4.39696 | opp_overlap 3634000, overlap 3634001 GTCTCGACGAGCAGA TCGACCTGCGTCG TCC CGGCGCGGAGCGG TTTATTGCTTTCAAG TERM 2711 3634145 - 3634155 + G 80 -8.2 -4.37527 | overlap 3634136 GTCCAAGCCTGCTGA CGGC GAG GCCG TTTTCATGGTTGTGA Rmet_3358 3633852 - 3634499 + | hypothetical protein TERM 2712 3634845 - 3634824 - g 72 -10.9 -3.45023 | opp_overlap 3634823 3634826 GGACTACCACCAGAA GATGGCAAC CTAC GCTGCCATC ATCTCTGGGCATGCG Rmet_3359 3634537 - 3635643 + | hypothetical protein Rmet_3360 3635640 - 3636101 + | hypothetical protein Rmet_3361 3636101 - 3637780 + | hypothetical protein Rmet_3362 3637862 - 3638128 + | hypothetical protein Rmet_3363 3639450 - 3638461 - | hypothetical protein TERM 2713 3638641 - 3638653 + g 79 -5.5 -4.64676 | overlap 3638630 ACGCCAGAGCCGCAT TGCGG CTA CCGTA TTTTGTTGCCGGTCA Rmet_3364 3640368 - 3639583 - | IstB-like ATP-binding protein Rmet_3365 3641884 - 3640358 - | integrase catalytic subunit TERM 2714 3641695 - 3641717 + g 72 -13.4 -3.16191 | TGAGCCACGCGGCGA GCTTGGCGGC ATG GCCGTCGAGC TTGCTCGGGCTCTGC Rmet_3366 3642210 - 3642034 - | hypothetical protein Rmet_3367 3642907 - 3642449 - | transcriptional regulator Rmet_3368 3645072 - 3642904 - | GCN5-related N-acetyltransferase TERM 2715 3643424 - 3643409 - G 73 -6 -4.42974 | opp_overlap 3643409 GGCAGACAGAACAAA GCGGGC GAAA GCACGC TTTCAAGCCTAAGAA Rmet_3369 3645798 - 3646805 + | phenylacetate-CoA oxygenase subunit PaaA Rmet_3370 3646825 - 3647112 + | phenylacetate-CoA oxygenase subunit PaaB Rmet_3371 3647123 - 3647980 + | phenylacetate-CoA oxygenase, PaaI subunit Rmet_3372 3647997 - 3648605 + | phenylacetate-CoA oxygenase, PaaJ subunit Rmet_3373 3648618 - 3649703 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit Rmet_3374 3649824 - 3650621 + | hypothetical protein TERM 2716 3650728 - 3650710 - g 70 -8.1 -3.99678 | gap 1 ATGGCCAGAACCAAA GCGCC-CG ATTT CGAGGCGC AACGAGAACAAATCC Rmet_3375 3650695 - 3651315 + | TetR family transcriptional regulator Rmet_3376 3653157 - 3651343 - | glutathione-regulated potassium-efflux system protein KefC Rmet_3377 3653813 - 3653154 - | NAD(P)H dehydrogenase (quinone) TERM 2717 3653538 - 3653516 - G 70 -11.2 -3.32343 | GCCACAGCTTGAGAA GCGCGGGCAC GCT GTACCAGCGC ACGGGAAACTGCAGG Rmet_3378 3654027 - 3654764 + | GCN5-related N-acetyltransferase TERM 2718 3654806 - 3654838 + T 100 -23.6 -3.84712 | opp_overlap 3654806 3654811, overlap 3654811 TGCTAGCTTGGAAAA GCAAACGGCGCACC CTCGC GGTGCGCCGTTTGC TTTGGTATGGCGTTC TERM 2719 3654838 - 3654806 - T 100 -23.6 -4.09685 | opp_overlap 3654806 3654811, overlap 3654811 TGCTAGCTTGGAAAA GCAAACGGCGCACC CTCGC GGTGCGCCGTTTGC TTTGGTATGGCGTTC TERM 2720 3654811 - 3654833 + T 100 -16.3 -4.12738 | opp_overlap 3654806 3654811, overlap 3654806 GCTTGGAAAAGCAAA CGGCGCACC CTCGC GGTGCGCCG TTTGCTTTGGTATGG TERM 2721 3654833 - 3654811 - T 100 -16.3 -4.19735 | opp_overlap 3654811 3654806, overlap 3654806 GCTTGGAAAAGCAAA CGGCGCACC CTCGC GGTGCGCCG TTTGCTTTGGTATGG TERM 2722 3654864 - 3654895 + T 75 -13.8 -2.94466 | gap 1, overlap 3654859 3654866 CGTTCAGCCAGCCGA TCA-GGCGTTGCCAG CTA CTGGCAGCGCCGTGG TGTCCTTGATCGATT TERM 2723 3654866 - 3654892 + T 77 -14.4 -2.70936 | overlap 3654864 3654859 TTCAGCCAGCCGATC AGGCGTTGCCAG CTA CTGGCAGCGCCG TGGTGTCCTTGATCG Rmet_3379 3655358 - 3654864 - | AsnC family transcriptional regulator TERM 2724 3655563 - 3655546 - R 100 -12.7 -6.15828 | opp_overlap 3655545 TCCACGAAAAAAAAA CGCGACC CGAA GGTCGCG CTCATCTGCCGGTGA Rmet_3380 3656216 - 3655587 - | signal transduction protein Rmet_3381 3656976 - 3656362 - | hypothetical protein Rmet_3382 3658436 - 3657147 - | globin TERM 2725 3658386 - 3658404 + g 81 -7.5 -4.57073 | opp_overlap 3658370 3658388 3658399 CAAAACTCCTTGAAT CATGCAT GTAAA ATGCATG TTTTTGCACACAATA TERM 2726 3658477 - 3658422 - G 73 -6.2 -4.38927 | gap 3, opp_overlap 3658437 3658437 TTTGCACACAATAAA GCCGGCAGACGACAT--GGGT-CGGGG TGGCC CCCCGAATCCTTATGCCACGTGCCGGC TCAGGAAATCTCGAT Rmet_3383 3658928 - 3658461 - | BadM/Rrf2 family transcriptional regulator Rmet_3384 3659107 - 3659571 + | general secretion pathway protein G TERM 2727 3659676 - 3659702 + G 79 -11.6 -3.8969 | TCACCCTGCTCGAAC TGCTGGTGGTCA TGG TGATCGCCGGCA TTGTTATCTCGCTGG Rmet_3385 3659588 - 3660112 + | general secretion pathway protein H Rmet_3386 3660109 - 3660513 + | general secretion pathway protein I Rmet_3387 3660503 - 3661195 + | Type II secretory pathway component PulJ TERM 2728 3661445 - 3661490 + G 70 -4.6 -4.36914 | gap 1 CGAACGTCGACTACC TCGGCGAGCCGTG-GTCGGTC CCGGT GGCCGAAACACGCCTGTCCGA TTTTCTCGGCGCCGG Rmet_3388 3661198 - 3662208 + | general secretion pathway protein K TERM 2729 3663318 - 3663288 - g 70 -11.1 -3.31263 | gap 1 ATGGCATGGCGACAA CG-CGGCCCTGGCG AACG CGCCAGTACCGGCG CTACAAGGCAAGCGT TERM 2730 3663911 - 3663878 - g 86 -13.7 -3.70722 | TGGATGAAGACAGAA GCCCGCCCGATGCGG CGAG CCGCAGCGGGGGCGC CCCGGCGCCGACCGG Rmet_3389 3662440 - 3663969 + | general secretion pathway L Rmet_3390 3663966 - 3664532 + | general secretion pathway M protein TERM 2731 3665194 - 3665178 - g 70 -5.7 -4.27316 | overlap 3665181 CGCTGCAACTGAAAA CCACGGC CGG GCCGCTG TACCTGGAGGGCAGC Rmet_3391 3664532 - 3665338 + | type II secretion system protein N TERM 2732 3666848 - 3666830 - g 73 -9.5 -3.91357 | overlap 3666827 CTACAACCAGAACAA GACCGCC GGCCT GGCGGCC ATCAGTGGCCTCGTG Rmet_3392 3665370 - 3667721 + | type II and III secretion system protein TERM 2733 3667790 - 3667814 + G 75 -14.9 -2.66435 | opp_overlap 3667779, overlap 3667787 GAAACGCCACTCGAA GCCCCGTCGCC GAT GGCGGCGCGGC TGGTCTCGTACACGT Rmet_3393 3667736 - 3669277 + | type II secretion system protein E (GspE) Rmet_3394 3669298 - 3670515 + | general secretion pathway protein F Rmet_3395 3671948 - 3670650 - | hypothetical protein TERM 2734 3672939 - 3672961 + G 77 -13.4 -3.30243 | GGCATCGGTTGAACT CGACCCGCAC CGC GTGCGGATCG TTCTGCCCGATGACT TERM 2735 3673608 - 3673591 - g 100 -9.1 -4.87291 | gap 1, overlap 3673593 CAGGCGAAGGAAAAA GCGCTGGC CAC GCC-GCGC GTCACCGCCGAGCGC Rmet_3396 3672256 - 3675849 + | indolepyruvate ferredoxin oxidoreductase TERM 2736 3675869 - 3675893 + F 100 -18.6 -4.70659 | opp_overlap 3675867 3675866 GGCGGAGCAGAACGG CGGCGCGGGA GTGAA TCCCGCGCCG TTTTTGCATCTGGGC Rmet_3397 3675974 - 3676393 + | GCN5-related N-acetyltransferase Rmet_3398 3676427 - 3676837 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2737 3676835 - 3676817 - f 73 -10.2 -3.60098 | overlap 3676818 ACCGTCGAGCTGAAA GGTCCGGC GAC GCCGGACT AAGGGATCCCCCCGG TERM 2738 3676834 - 3676818 - f 73 -13.7 -2.75844 | overlap 3676817 CCGTCGAGCTGAAAG GTCCGGC GAC GCCGGAC TAAGGGATCCCCCCG TERM 2739 3677586 - 3677641 + G 93 -17.4 -3.53546 | gap 1, overlap 3677588 3677630 3677636 CCCACAGCGGCACAC CGCTGGCCGGCGCGGCGTC-CTCCGGC ATC GCCCGCGCGACGCTGCGCCAGCCGGTA TTCTGGTGTGTTGTG TERM 2740 3677588 - 3677639 + G 100 -22.2 -3.3318 | gap 1, overlap 3677586 3677630 3677636 CACAGCGGCACACCG CTGGCCGGCGCGGCGTC-CTCCGGC ATC GCCCGCGCGACGCTGCGCCAGCCGG TATTCTGGTGTGTTG Rmet_3399 3676949 - 3678202 + | major facilitator transporter Rmet_3400 3678279 - 3679481 + | major facilitator transporter Rmet_3401 3680389 - 3679499 - | extradiol ring-cleavage dioxygenase III subunit B TERM 2741 3680084 - 3680072 - G 88 -10.5 -4.41616 | ATCCTCGCAAACAAA CCCGG CGC CCGGG ATCTGAGCCGCCTCG Rmet_3402 3680412 - 3680990 + | hypothetical protein Rmet_3403 3681021 - 3682406 + | major facilitator transporter TERM 2742 3682435 - 3682452 + F 100 -11.3 -5.75342 | opp_overlap 3682435 CGCAAGCAGAAGAAA GCCAACC TCCG GGTTGGC TTTTTTTTCGCCAGC TERM 2743 3682452 - 3682435 - f 93 -11.3 -4.3953 | opp_overlap 3682435 CGCAAGCAGAAGAAA GCCAACC TCCG GGTTGGC TTTTTTTTCGCCAGC Rmet_3404 3682596 - 3683222 + | DNA-3-methyladenine glycosylase I Rmet_3405 3683577 - 3684215 + | lysine exporter protein LysE/YggA Rmet_3406 3685220 - 3684207 - | cation diffusion facilitator family transporter TERM 2744 3685077 - 3685112 + g 71 -12.4 -3.23216 | GACACTGACCATCGT GCTGCGTCGGCCTGCC AGAT GGCGTGCCCGCGCGGC TTCGTCGTGCTGGGC TERM 2745 3685675 - 3685653 - g 88 -11.3 -4.26076 | gap 1 CCATCTCTACGAAAA CCTGGCCGGC CTGT GCCGGC-AGG ACTATCCCGACTACC TERM 2746 3685967 - 3686010 + G 79 -10.9 -3.86346 | gap 1 TCACATGCCTGTATC GGGGCCGCCCAGTCGACGGC ATCTG GTCG-CGGCTGGGTGCCGCC TTTATCAACGAATGG TERM 2747 3686029 - 3686070 + G 79 -11.5 -3.84451 | gap 1, overlap 3686028 3686066 ATCAACGAATGGTTC GCGCCGTCGGTCCGCGTG GCCCACG CGGGCGGGTCG-CGGCGC TTTGCCTTTGGCGCG Rmet_3407 3685510 - 3686652 + | glycosyl transferase family protein Rmet_3408 3686649 - 3688070 + | radical SAM family protein TERM 2748 3688355 - 3688368 + G 71 -4.5 -4.48713 | overlap 3688356 GGCAGCGCGATGGTG CGGGA CGGC TTCCG TTTCTTCTTCCTGCC Rmet_3409 3688076 - 3688903 + | YdjC-like protein TERM 2749 3689779 - 3689812 + G 75 -14.6 -2.74523 | gap 1, overlap 3689777 GACCCGCAGACCTCG C-TCGCGCTCGCGCT GGTCA AGCGCGCGCGCGAAG TCCTGTTCGGGGTAC Rmet_3410 3688900 - 3689889 + | hypothetical protein Rmet_3411 3690910 - 3689918 - | hypothetical protein Rmet_3412 3693366 - 3690964 - | acyl-CoA dehydrogenase-like protein Rmet_3413 3694142 - 3693372 - | enoyl-CoA hydratase/isomerase Rmet_3414 3695391 - 3694153 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_3415 3696443 - 3695469 - | hypothetical protein Rmet_3416 3696645 - 3697607 + | LysR family transcriptional regulator TERM 2750 3697692 - 3697668 - T 100 -20.1 -5.61881 | opp_overlap 3697668 CCGGAAAAAGAAAAA GGGGCTTGGCA ATT TGCCAAGCCCC TTTGCATTTGGTGGA TERM 2751 3697668 - 3697692 + T 100 -20.1 -3.87149 | opp_overlap 3697668 CCGGAAAAAGAAAAA GGGGCTTGGCA ATT TGCCAAGCCCC TTTGCATTTGGTGGA Rmet_3417 3699568 - 3697844 - | sulfate thiol esterase SoxB Rmet_3418 3700096 - 3699596 - | thioredoxin-like protein Rmet_3419 3700769 - 3700107 - | hypothetical protein Rmet_3420 3701656 - 3700781 - | hypothetical protein TERM 2752 3701218 - 3701242 + g 71 -9.4 -3.80018 | gap 1 CGGACGGCTTGCCCT GCGACG-AGAA CGGG TTCTTCGTCGC TTCTTCCTGTGTCAG TERM 2753 3701794 - 3701752 - R 74 -11.3 -3.54424 | CCGGACTTCCGGAAA TCGCGCTCGGCGCTCG-CGCT TGC AGCGGCGAACGCCTCGCG-GA CACATCAGGGCTTGA Rmet_3421 3702257 - 3701799 - | putative signal peptide protein Rmet_3422 3702592 - 3702281 - | sulfur compound chelating protein SoxZ Rmet_3423 3703111 - 3702656 - | twin-arginine translocation pathway signal TERM 2754 3703353 - 3703317 - R 86 -12.1 -3.87815 | opp_overlap 3703344 3703347, overlap 3703318 TCCTACCGCCAGAAA TGGCACGGGCCGCCGGA ACA TCGGACGGCCCGCGCGG ACGTCGCGGCGCTTA TERM 2755 3703352 - 3703318 - R 81 -15.6 -2.92475 | opp_overlap 3703344 3703347, overlap 3703317 CCTACCGCCAGAAAT GGCACGGGCCGCCGGA ACA TCGGACGGCCCGCGCG GACGTCGCGGCGCTT Rmet_3424 3703692 - 3703366 - | cytochrome c, class I Rmet_3425 3704863 - 3703970 - | hypothetical protein Rmet_3426 3706294 - 3705014 - | sulfide dehydrogenase (flavocytochrome), flavoprotein subunit Rmet_3427 3706675 - 3706298 - | cytochrome c, class I Rmet_3428 3707535 - 3706681 - | transport-associated Rmet_3429 3708277 - 3707690 - | phosphoheptose isomerase Rmet_3430 3708712 - 3708308 - | hypothetical protein TERM 2756 3708677 - 3708729 + g 72 -8.9 -4.18018 | overlap 3708680 CTCGGCCAGCGCGCC TTGCCGCGTCGTGGACGATGCCGGC CGC GCCGGCAACGCGGATGGCGTGGTGG TTTTGAATGAGCGAA TERM 2757 3708680 - 3708726 + g 72 -12.8 -3.11208 | overlap 3708677 GGCCAGCGCGCCTTG CCGCGTCGTGGACGATGCCGGC CGC GCCGGCAACGCGGATGGCGTGG TGGTTTTGAATGAGC Rmet_3431 3708765 - 3709664 + | hypothetical protein Rmet_3432 3710504 - 3709749 - | rare lipoprotein A Rmet_3433 3710783 - 3711451 + | beta-lactamase-like protein TERM 2758 3711688 - 3711666 - g 71 -7.6 -4.11484 | TGCAATGGTGGAAAA CGCAGCCC GAAGCCT GGGCGGCG TGCCGGCGTGACCTG Rmet_3434 3711455 - 3712102 + | hypothetical protein Rmet_3435 3712310 - 3712540 + | hypothetical protein TERM 2759 3712577 - 3712603 + T 100 -21.6 -3.81755 | TCCCTGTCTGACCGG CCGGCCTCCACC TCT GGTGGGGGCCGG TTCTATTTCAGGGGT Rmet_3436 3712991 - 3712632 - | arsenate reductase Rmet_3437 3713134 - 3713754 + | GCN5-related N-acetyltransferase Rmet_3438 3714411 - 3713791 - | NAD(P)H dehydrogenase (quinone) TERM 2760 3714018 - 3713983 - G 72 -11 -3.53012 | gap 1, opp_overlap 3713984 GGGCCCGTCGTGAAA CGCGCCGCCGCAGGCCA CCA CGGCCAGCACCGG-GCG GTCTCGCAGCAGGCC Rmet_3439 3714937 - 3714488 - | GCN5-related N-acetyltransferase TERM 2761 3714589 - 3714613 + g 75 -10 -3.92324 | gap 1 GCGTGTCCAGCACCA GC-CGCGCGCA TCCC TGCGCGTGCGC TTTCGTCTTCAGCCA Rmet_3440 3715392 - 3714934 - | alkylhydroperoxidase AhpD core Rmet_3441 3715452 - 3715976 + | MarR family transcriptional regulator TERM 2762 3716008 - 3715982 - T 100 -15.9 -5.26875 | gap 1 CGCCGAATGAAAAAA GGCCCGCG-GAC GAGT GTCTCGCGGGCC ATCATCACAACCAAG Rmet_3442 3717323 - 3716055 - | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase TERM 2763 3717349 - 3717367 + r 77 -11.6 -3.61715 | TCTGGAGTTTTCGGG GCGACGCC GAT GGCGGCGC TTATTGGGGGCGATG Rmet_3443 3718624 - 3717368 - | allantoate amidohydrolase TERM 2764 3719097 - 3719147 + G 86 -9.7 -4.58283 | gap 1, overlap 3719099 CGATTCACCCGCTCC CTGTTCGGTCA-GGTGCTGATCGC GCTG GTGATCGGCACCCTGCTCGGGCTG TTTTTCCCCGAGTTC TERM 2765 3719099 - 3719145 + G 79 -10.9 -3.90316 | gap 1, overlap 3719097 ATTCACCCGCTCCCT GTTCGGTCA-GGTGCTGATCGC GCTG GTGATCGGCACCCTGCTCGGGC TGTTTTTCCCCGAGT Rmet_3444 3719031 - 3720434 + | C4-dicarboxylate transporter DctA Rmet_3445 3720487 - 3721179 + | GntR family transcriptional regulator TERM 2766 3721310 - 3721335 + T 100 -13.3 -5.45802 | gap 1 TTCGCAAGAGGGACC GCCCGCAGACCG CAA TGG-CTGCGGGC TTTTTCTTTTGGGGG Rmet_3446 3722407 - 3721412 - | LysR family transcriptional regulator TERM 2767 3721693 - 3721703 + g 72 -6.8 -4.26076 | TCACGCGCACCGTCA CGGT CTT ACCG TTTTGCTGGAAGTAC Rmet_3447 3723138 - 3722455 - | hypothetical protein Rmet_3448 3723423 - 3725213 + | glyoxylate carboligase TERM 2768 3725239 - 3725277 + F 100 -12.4 -4.56597 | gap 1, overlap 3725240 CCGCTTCCCCGTAGT ACGCCAC-CCTGCCCCG CTCCAC CGGGGTGGGTGTGGCGG TTTTTCCCAGACACC TERM 2769 3725240 - 3725276 + F 89 -15.9 -3.33744 | gap 1, overlap 3725239 CGCTTCCCCGTAGTA CGCCAC-CCTGCCCCG CTCCAC CGGGGTGGGTGTGGCG GTTTTTCCCAGACAC Rmet_3449 3725271 - 3726086 + | xylose isomerase-like TIM barrel Rmet_3450 3726141 - 3727064 + | 2-hydroxy-3-oxopropionate reductase TERM 2770 3727069 - 3727108 + F 93 -14.3 -3.93867 | opp_overlap 3727066 3727065, overlap 3727061 3727072 GCGCGAAGTAAGCCC TC-CCGCGGCTGCCCTGCC TGAC GGC-GGGCGGCCGCGTTGA TTGTTGTCCTTGTTT TERM 2771 3727072 - 3727104 + F 100 -20.6 -3.59882 | gap 1, opp_overlap 3727066 3727065, overlap 3727069 3727061 CGAAGTAAGCCCTCC CGCGGCTGCCCTGCC TGAC GGC-GGGCGGCCGCG TTGATTGTTGTCCTT TERM 2772 3727665 - 3727647 - g 71 -10.2 -3.62046 | overlap 3727632 3727648 GCAGGCCGTGAACAA GGCGCTGC TGC GCAGCGGC GCGAGCATCGGCGAG Rmet_3451 3727153 - 3728484 + | glycerate 2-kinase Rmet_3452 3728523 - 3729989 + | pyruvate kinase Rmet_3453 3730287 - 3731180 + | protein of unknown function, zinc metallopeptidase putative TERM 2773 3731269 - 3731223 - T 73 -5.1 -4.59773 | overlap 3731224 GCCGAGGGGGAAAAA TCACCTGCGCGACGGAG AGAGATGGAGGAG GTCGGTCGCGCAGGTGG GAGAGAAACTTTTGA Rmet_3454 3731680 - 3731333 - | hypothetical protein Rmet_3455 3732406 - 3731969 - | GreA/GreB family elongation factor TERM 2774 3732369 - 3732389 + g 100 -8.9 -4.87626 | overlap 3732365 TAAAGGGTTGCCGGG CGCGACGGC GCG GCGGTCGTG TTTTTGGTCTTGGCC TERM 2775 3732582 - 3732602 + r 74 -11.8 -3.47227 | GTACGTGCTGGCTCG GGCCCGGT TCGGC GCCGGGCC TTCTGCTGGTTCAGG Rmet_3456 3733395 - 3732946 - | MerR family transcriptional regulator Rmet_3457 3733833 - 3733447 - | S-adenosylmethionine decarboxylase related TERM 2776 3734030 - 3734020 - R 88 -2.4 -5.50774 | GACAAGAAACAAAAA GCGC ACA GCTC AGTCCCCTCCCCCGA Rmet_3458 3735573 - 3734029 - | putative transmembrane protein TERM 2777 3734307 - 3734348 + g 74 -15.1 -2.62616 | GCGCGACCTGGGTGC GCGACACCGTGGTGGACTG CGTC CAGACGATCTCGGTGTCGC TCGTCTCGCGCGTCA Rmet_3459 3736605 - 3735583 - | putative transmembrane protein Rmet_3460 3737032 - 3736646 - | hypothetical protein Rmet_3461 3737236 - 3738747 + | spermidine synthase Rmet_3462 3738829 - 3740499 + | hypothetical protein Rmet_3463 3740510 - 3741007 + | hypothetical protein Rmet_3464 3741119 - 3741997 + | heat shock protein HtpX Rmet_3465 3743043 - 3742018 - | transcriptional regulator Rmet_3466 3744285 - 3743077 - | major facilitator transporter TERM 2778 3744003 - 3743986 - G 76 -5.5 -4.55287 | overlap 3743989 3743995 3743996 CGTACCGAGACAAAA CAACACG AAGT CGTGCCG CCAGATCGCCAGCAC TERM 2779 3744000 - 3743989 - G 73 -5.8 -4.38744 | overlap 3743986 3743995 3743996 ACCGAGACAAAACAA CACG AAGT CGTG CCGCCAGATCGCCAG Rmet_3467 3747584 - 3744390 - | cytochrome P450 TERM 2780 3747431 - 3747381 - G 71 -12.5 -3.28712 | gap 2, overlap 3747363 3747382 3747411 CGTGGCGTCGCACAA CTCGCTGGCCAGCGCG-ACCG-ACG ACA CGAACGGCACGCGCTTGCCGGCGAA GTCGAGTTCGAAGAT TERM 2781 3747430 - 3747382 - G 70 -13.8 -2.57132 | gap 2, overlap 3747363 3747381 3747411 GTGGCGTCGCACAAC TCGCTGGCCAGCGCG-ACCG-ACG ACA CGAACGGCACGCGCTTGCCGGCGA AGTCGAGTTCGAAGA Rmet_3468 3748207 - 3747791 - | class I peptide chain release factor TERM 2782 3748227 - 3748185 - G 100 -14.2 -5.14563 | gap 1 TGTGGGATGAAAAAA TCGTCGGCCA-TGCGCCGC ATCATA GCAACGCTGTGGCCGACGA TGTGGAGCAATCGGT Rmet_3469 3749635 - 3748244 - | FAD linked oxidase-like protein TERM 2783 3748342 - 3748359 + g 71 -9.8 -3.79747 | AGTTCGGGCCATAGG CCGCGC CGATGC GCGCGG TTTCATCGTCGGTCA TERM 2784 3749705 - 3749734 + r 76 -14.4 -2.63555 | gap 1, opp_overlap 3749704 3749700, overlap 3749702 3749701 ATCCATGCAAGGCAC GCGCCAATG-GGC GGAAA GCCGCATTGGCGC TGGATTGTCTCAATG Rmet_3470 3750655 - 3749855 - | enoyl-CoA hydratase Rmet_3471 3750920 - 3751300 + | hypothetical protein Rmet_3472 3751310 - 3751543 + | hypothetical protein TERM 2785 3751581 - 3751632 + F 95 -16 -3.80893 | gap 1, overlap 3751554 GCCCTTGCGGCGATC GGCGCGGATTTGGGTACGCATGG CATTGGC CCGTGCGTA-TCGGGTCCGCGCC TTTGACTTCTGGCAT TERM 2786 3752261 - 3752246 - g 70 -2.5 -4.71426 | CGTCCACCAAGAAAA CGACC ACCACG AGTCG CCAATCAAGACCCCC Rmet_3473 3752223 - 3753107 + | cytochrome c, class I TERM 2787 3753149 - 3753120 - T 81 -15.7 -2.93878 | overlap 3753115 TAAGAGCGAATGACA GTGACGCCCGGGG GCAA CCCCGGAAGTCAC CCCGGCTCCACAAAA TERM 2788 3753154 - 3753201 + T 79 -15.1 -2.96873 | gap 1, opp_overlap 3753168, overlap 3753168 CCGGAAGTCACCCCG GCTCCACAAAAAAAGCCCGCGA ATATC TCGCGGGCTTTTTTTATTG-GC TCATTTGCTGAGCAT TERM 2789 3753188 - 3753168 - T 100 -14.7 -5.60993 | opp_overlap 3753154 3753168 GGCTCCACAAAAAAA GCCCGCGAA TAT CTCGCGGGC TTTTTTTATTGGCTC TERM 2790 3753168 - 3753188 + T 100 -14 -5.8187 | opp_overlap 3753168, overlap 3753154 GGCTCCACAAAAAAA GCCCGCGA ATATC TCGCGGGC TTTTTTTATTGGCTC Rmet_3474 3754729 - 3753227 - | coproporphyrinogen III oxidase TERM 2791 3754044 - 3754077 + g 73 -9.5 -3.82218 | gap 1, opp_overlap 3754043 3754038, overlap 3754039 3754048 CTGATCGAACGGAAC CCGA-GGCGTCGCGCG GCC CGCACCACGCCGTTGG TTTCCTCATATGACT TERM 2792 3755200 - 3755245 + G 87 -17.7 -2.79302 | gap 1, overlap 3755175 3755197 ACTACCTGGCCGGCG CGAAGG-TGCTGTTCGACGCGT ACA ACGCGTCCAACGGCAGCCTGCG TATCGTCCACGTCGT Rmet_3475 3754965 - 3756143 + | putative ABC-type branched-chain amino acid transport systems periplasmic component Rmet_3476 3757480 - 3756167 - | periplasmic sensor signal transduction histidine kinase TERM 2793 3757068 - 3757087 + g 73 -9.2 -3.91897 | GGCCCAGGTGGTCCG GGCGGCAT GAGT ACGCCGCC TTTCTGCATGCGGAA TERM 2794 3757267 - 3757223 - G 80 -15 -3.05596 | gap 2, opp_overlap 3757223 3757227, overlap 3757226 CAGTGGTGCAGGCAA TGAGTG-GCCG-GCCGCCTCGG CTT CCGAGGCGGCGCGGCGCATCCG TTCCATGTAGCGCTC TERM 2795 3757223 - 3757267 + g 88 -17.2 -3.12668 | gap 2, opp_overlap 3757223 3757226, overlap 3757227 CAGTGGTGCAGGCAA TGAGTG-GCCG-GCCGCCTCGG CTT CCGAGGCGGCGCGGCGCATCCG TTCCATGTAGCGCTC TERM 2796 3757264 - 3757226 - G 84 -17.5 -2.75064 | gap 2, opp_overlap 3757223 3757227, overlap 3757223 TGGTGCAGGCAATGA GTG-GCCG-GCCGCCTCGG CTT CCGAGGCGGCGCGGCGCAT CCGTTCCATGTAGCG TERM 2797 3757227 - 3757263 + g 100 -21 -2.56095 | gap 2, opp_overlap 3757226 3757223, overlap 3757223 GGTGCAGGCAATGAG TG-GCCG-GCCGCCTCGG CTT CCGAGGCGGCGCGGCGCA TCCGTTCCATGTAGC Rmet_3477 3758270 - 3757485 - | two component transcriptional regulator TERM 2798 3758390 - 3758362 - R 100 -14.6 -5.42862 | gap 1 AGAGGCGGAAAAAAA CGCCCCCGG-TGC TGCC GCATCCGGGAGCG CTCAACAGGGAAGAA TERM 2799 3758427 - 3758406 - R 71 -9.3 -3.7347 | CTCAACAGGGAAGAA GCCGGGCTC GCAT GCGCCCAGC ACACACCGCAAACCG Rmet_3478 3760628 - 3758541 - | ATP-dependent DNA helicase Rep Rmet_3479 3760922 - 3761143 + | osmotically inducible lipoprotein TERM 2800 3761521 - 3761579 + F 100 -26.1 -2.90208 | gap 1, overlap 3761522 ATCGAGGACAGAGGG GTCATCCGCGGCAGCGGACTGGTAGCGC ATTG GCGCGACCGGAC-GCTGCGGCGGATGAC CCTTTTTTCGTTTTC TERM 2801 3761522 - 3761580 + F 82 -11.8 -3.86392 | gap 3, overlap 3761521 TCGAGGACAGAGGGG --TCATCCGCGGCAGCGGACTGGTAGCGC ATTG GCGCGACCGGAC-GCTGCGGCGGATGACC CTTTTTTCGTTTTCG gcvT 3761634 - 3762761 + | glycine cleavage system aminomethyltransferase T Rmet_3481 3762865 - 3763245 + | glycine cleavage system protein H TERM 2802 3763310 - 3763279 - f 93 -15.9 -3.55563 | gap 1 ATTCGATGCCGCAAA CGCGGCGGCCAGGC TGACC ACCTG-CCGCCGCG CCCCCACGAGATTCC TERM 2803 3764588 - 3764568 - g 71 -13.3 -3.02263 | AGACCGGCTTCAACA CCGACGCGT TCC ACGCATCGG CCACGGCCCGTGGCA TERM 2804 3765612 - 3765659 + G 80 -11.8 -3.78736 | opp_overlap 3765607 GCGACGAGAACGGCA TCGGCGGTGTCTCGGCCGCGCC GTTC GGCTCGGCCAGCATCCTGCCGA TTTCGTGGATGTATA Rmet_3482 3763331 - 3766255 + | glycine dehydrogenase TERM 2805 3766302 - 3766335 + F 72 -12.3 -3.02043 | gap 1 GTCGGGGGACACTCC GGCGTCGCCGGC-CGG AAC CTGTGCCGGCGCCCCC TATTGGCGGCGCATT TERM 2806 3767216 - 3767200 - g 95 -10.8 -4.78572 | overlap 3767202 CGTCAACGAAGAAAA CGCGGC GGGTG GCCGCG TGGTCACGGCGCCCA Rmet_3483 3766364 - 3767740 + | L-serine ammonia-lyase Rmet_3484 3767833 - 3768579 + | beta-lactamase-like protein TERM 2807 3768584 - 3768610 + T 76 -13.6 -3.05384 | opp_overlap 3768561 ACGGCGCGTGAGTTG AGCGCTGCGCAG CGT CGGCGCAGCGCC TTGCCTCAGCCGCCC Rmet_3485 3769734 - 3768616 - | carboxylate-amine ligase TERM 2808 3768684 - 3768706 + g 72 -12.7 -3.15544 | opp_overlap 3768656 3768698, overlap 3768657 3768698 GCGCATCGCGATTGG CGGCGCGCA CCCAA TGCGCGTCG TTGCTGCGGCTCGCC Rmet_3486 3770954 - 3769734 - | sodium/hydrogen exchanger TERM 2809 3770979 - 3770999 + r 71 -7.5 -4.25658 | AGCACATGAACTTTC GTGTCGGGT GTT GTCCGACGC TTCTTTTAATACGCT TERM 2810 3771044 - 3771063 + r 79 -12.2 -3.54459 | opp_overlap 3771044 TCTTCCATTAAAAAA CGCCATCT TCGC AGATGGCG TTTCCCCGGGGTTGG TERM 2811 3771063 - 3771044 - R 100 -12.2 -5.14563 | opp_overlap 3771044 TCTTCCATTAAAAAA CGCCATCT TCGC AGATGGCG TTTCCCCGGGGTTGG Rmet_3487 3773050 - 3771095 - | tetratricopeptide TPR_4 TERM 2812 3773163 - 3773190 + r 88 -19.2 -2.85351 | gap 1, opp_overlap 3773163 CCGCCCAACAAAAAA CGCCACCACGGGC CGG GCCCG-GGTGGCG TCTGGTATCGCGCGG TERM 2813 3773190 - 3773163 - R 100 -19.2 -5.4505 | gap 1, opp_overlap 3773163 CCGCCCAACAAAAAA CGCCACCACGGGC CGG GCCCG-GGTGGCG TCTGGTATCGCGCGG TERM 2814 3773195 - 3773247 + r 78 -15.6 -2.60244 | overlap 3773194 CCCGGGTGGCGTCTG GTATCGCG-CGGCGCGCTGGGCGG AGGAAAG CCGTCCGGCGCGCCGATGCGG-GC TGGCTTACTTGCCGC Rmet_3488 3774403 - 3773252 - | extracellular ligand-binding receptor putA 3778520 - 3774558 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2815 3774645 - 3774634 - G 70 -5.8 -4.24342 | opp_overlap 3774633, overlap 3774619 CGTTCGATCAACAAA CGCT CCAG AGCG ATATTCGGTTCACCG Rmet_3490 3781012 - 3778718 - | primosome assembly protein PriA TERM 2816 3781497 - 3781464 - R 70 -13.1 -2.88861 | gap 1, overlap 3781486 GACGACTGCGACACA GCGGCGCAGTCGGGTC GAC GAATCG-CTGCGCCGC GGGGAAAACGCCTGT TERM 2817 3781520 - 3781506 - R 71 -7.8 -4.07568 | opp_overlap 3781519 GCGCCGCGGGGAAAA CGCCTG TTT CAGACG GCCGCTGCAACCTGC hemE 3782617 - 3781514 - | uroporphyrinogen decarboxylase TERM 2818 3782367 - 3782325 - G 76 -9.7 -4.1196 | gap 1, overlap 3782316 AACGGATGCGCAAAA CGCGGGCCCTCGCCCTG-CG CGAA CGACAGGCCGAGGCCCATCG CATCGGGTACGGTGA Rmet_3492 3783689 - 3782733 - | Alpha/beta hydrolase fold-3 TERM 2819 3784266 - 3784293 + r 100 -10.5 -5.9873 | gap 1, overlap 3784267 AAGGGATTTTCCCGT CCGCGCGGAGCC TCCCC GGC-CCGCGCGC TTTTTTTTGTGGTCC TERM 2820 3784267 - 3784292 + r 100 -14 -4.17611 | gap 1, overlap 3784266 AGGGATTTTCCCGTC CGCGCGGAGCC TCCCC GGC-CCGCGCG CTTTTTTTTGTGGTC TERM 2821 3784360 - 3784343 - R 100 -12.7 -5.36441 | opp_overlap 3784343 CCGTCAGATAAAAAA GGCAGCC CGCG GGCTGCC TTTTTTAGTGCCGCG TERM 2822 3784343 - 3784360 + r 100 -12.7 -5.14563 | opp_overlap 3784343 CCGTCAGATAAAAAA GGCAGCC CGCG GGCTGCC TTTTTTAGTGCCGCG atpC 3784829 - 3784413 - | F0F1 ATP synthase subunit epsilon Rmet_3494 3786371 - 3784968 - | F0F1 ATP synthase subunit beta Rmet_3495 3787280 - 3786405 - | F0F1 ATP synthase subunit gamma Rmet_3496 3788892 - 3787351 - | F0F1 ATP synthase subunit alpha Rmet_3497 3789474 - 3788932 - | F0F1 ATP synthase subunit delta Rmet_3498 3789947 - 3789477 - | F0F1 ATP synthase subunit B TERM 2823 3790033 - 3789983 - R 71 -6.8 -4.19024 | overlap 3789990 CAAACTACAGATAAA TGCACAAGGGCGGC-CAGGCCATC GGACT GA-GGCCCACGCCGCCCGTCAGCA TCATGCAGACCGAAA TERM 2824 3790026 - 3789990 - R 74 -10.9 -3.51118 | overlap 3789983 CAGATAAATGCACAA GGGCGGC-CAGGCCATC GGACT GA-GGCCCACGCCGCCC GTCAGCATCATGCAG Rmet_3499 3790319 - 3790053 - | F0F1 ATP synthase subunit C TERM 2825 3790384 - 3790374 - R 84 -3.2 -5.25735 | CCAAAAAACCAAAAA CCGA AAA TCAG TGGTGATCGTGAGCC Rmet_3500 3791250 - 3790381 - | F0F1 ATP synthase subunit A Rmet_3501 3792024 - 3791485 - | ATP synthase I chain Rmet_3502 3792172 - 3792429 + | hypothetical protein Rmet_3503 3793297 - 3792395 - | chromosome segregation DNA-binding protein Rmet_3504 3794107 - 3793334 - | chromosome segregation ATPase Rmet_3505 3794886 - 3794179 - | methyltransferase GidB Rmet_3506 3796851 - 3794887 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2826 3796197 - 3796171 - G 70 -5.1 -4.45544 | opp_overlap 3796183, overlap 3796173 GCCCAGGAACGAAAA CACCGGC-ACCGG GTC CAGGTCGCCGG-G CTGCTCTTCCATCAC TERM 2827 3797044 - 3797019 - R 100 -20.5 -4.21812 | opp_overlap 3797013 3797007 3797022, overlap 3797022 CCCGAGCCAAAAGAA GAAGGCCCCGC TTCC GCGGGGCCTTC CCTCTGCTCTTCTCT TERM 2828 3797022 - 3797041 + r 85 -16.4 -3.16154 | opp_overlap 3797019 3797022, overlap 3797013 3797007 GAGCCAAAAGAAGAA GGCCCCGC TTCC GCGGGGCC TTCCCTCTGCTCTTC TERM 2829 3797041 - 3797022 - R 100 -16.4 -4.22475 | opp_overlap 3797022 3797013 3797007, overlap 3797019 GAGCCAAAAGAAGAA GGCCCCGC TTCC GCGGGGCC TTCCCTCTGCTCTTC Rmet_3507 3797967 - 3797089 - | N-formylglutamate amidohydrolase Rmet_3508 3798933 - 3797971 - | hypothetical protein Rmet_3509 3799121 - 3800023 + | LysR family transcriptional regulator TERM 2830 3800106 - 3800084 - T 100 -17.8 -4.67607 | TGCTCAACAAATAAA GACGACGCCA TTA TGGCGTCGTC AATCAAACACAAGAA Rmet_3510 3800877 - 3800134 - | ABC transporter-related protein Rmet_3511 3802740 - 3800887 - | ABC transporter-related protein TERM 2831 3802225 - 3802198 - G 74 -11.3 -3.6336 | CCAGATCAGATAGAA CATCGAGCGGC CCGATT GCAGCTCGATG CCGAACAGCGACAGC Rmet_3512 3803796 - 3802744 - | inner-membrane translocator TERM 2832 3803929 - 3803904 - R 100 -16.2 -5.47218 | opp_overlap 3803904 GCGGAGGTAAAAAAA GGGCGCATGG CAAACT CCATGCGCCC TTCCGTACCACGCTT TERM 2833 3803904 - 3803929 + r 83 -16.2 -3.05715 | opp_overlap 3803904 GCGGAGGTAAAAAAA GGGCGCATGG CAAACT CCATGCGCCC TTCCGTACCACGCTT Rmet_3513 3805116 - 3803968 - | extracellular ligand-binding receptor TERM 2834 3805143 - 3805183 + r 100 -11.7 -5.4505 | opp_overlap 3805148, overlap 3805144 3805145 CGGTTCCAAAAACGG AAAAAGGCATCCGCCGGCT TCC GGCCGGCGGATGCCTCCAG TTTTTTGTTGCGGCC TERM 2835 3805144 - 3805182 + r 93 -15.2 -3.86307 | opp_overlap 3805148, overlap 3805143 3805145 GGTTCCAAAAACGGA AAAAGGCATCCGCCGGCT TCC GGCCGGCGGATGCCTCCA GTTTTTTGTTGCGGC TERM 2836 3805145 - 3805181 + r 86 -18.7 -2.91061 | opp_overlap 3805148, overlap 3805144 3805143 GTTCCAAAAACGGAA AAAGGCATCCGCCGGCT TCC GGCCGGCGGATGCCTCC AGTTTTTTGTTGCGG TERM 2837 3805178 - 3805148 - R 100 -24.1 -4.92239 | opp_overlap 3805145 3805144 3805143 CCAAAAACGGAAAAA GGCATCCGCCGGC TTCCG GCCGGCGGATGCC TCCAGTTTTTTGTTG Rmet_3514 3806211 - 3805453 - | hypothetical protein TERM 2838 3806032 - 3806068 + g 78 -14.3 -3.21416 | overlap 3806033 3806046 CTTGCGCGCATAGCG TGTCGCGGCGTTGGCGG TGC CCGCCAGCGACGCCACC TTGGTGGTGCCGATC TERM 2839 3806033 - 3806067 + g 83 -17.8 -2.52635 | overlap 3806032 3806046 TTGCGCGCATAGCGT GTCGCGGCGTTGGCGG TGC CCGCCAGCGACGCCAC CTTGGTGGTGCCGAT TERM 2840 3806143 - 3806119 - G 72 -6.4 -4.21936 | gap 1, overlap 3806121 GGGATAAGTGGAAAA CAGGGCCGGTA CCTG CACCAGCCC-G CCGCCGCCAGCGACA TERM 2841 3806142 - 3806121 - G 74 -10.1 -3.70689 | overlap 3806119 GATAAGTGGAAAACA GGGCCGGTA CCTG CACCAGCCC GCCGCCGCCAGCGAC Rmet_3515 3806761 - 3806246 - | hypothetical protein TERM 2842 3806876 - 3806906 + r 100 -14.7 -4.55023 | opp_overlap 3806877, overlap 3806877 CGCCAGAAATGAAAA AGGCGTTGCTGGG GATCA CCCGGCAACGCCC TTTTATCGTATTGGC TERM 2843 3806905 - 3806877 - R 100 -16 -5.04601 | opp_overlap 3806876 3806877 GCCAGAAATGAAAAA GGCGTTGCTGGG GATCA CCCGGCAACGCC CTTTTATCGTATTGG TERM 2844 3806877 - 3806905 + r 95 -18.2 -3.32291 | opp_overlap 3806877, overlap 3806876 GCCAGAAATGAAAAA GGCGTTGCTGGG GATCA CCCGGCAACGCC CTTTTATCGTATTGG Rmet_3516 3808119 - 3807085 - | inner-membrane translocator Rmet_3517 3809003 - 3808119 - | inner-membrane translocator Rmet_3518 3810385 - 3809177 - | extracellular ligand-binding receptor TERM 2845 3810489 - 3810451 - R 73 -10.3 -3.66874 | gap 1 CCAATGCGAGTTAAA TGCGACC-ACGGCACCGC AGAC GCGGCGCCGTCGATCAGA CCCCAAGCAGTTCGT Rmet_3519 3811210 - 3810485 - | ABC transporter-related protein TERM 2846 3810864 - 3810902 + g 70 -6 -4.25104 | gap 1 TCGCTCATGCCCTTG CCTGC-GTTGGCGCC CTTGAGCATC GGCGGCAGCAGCAGG TTTTCCTCACACGAC Rmet_3520 3811996 - 3811223 - | ABC transporter-related protein Rmet_3521 3814023 - 3812356 - | glucose-methanol-choline oxidoreductase Rmet_3522 3815012 - 3814104 - | alpha/beta hydrolase fold Rmet_3523 3815550 - 3815131 - | MerR family transcriptional regulator Rmet_3524 3817988 - 3815547 - | heavy metal translocating P-type ATPase TERM 2847 3815661 - 3815637 - GH 84 -9.9 -4.16943 | overlap 3815638 GCTGACACTTGAAAA TGCCATGGCGG CGC CCGCCACGACC GGATTGAGCAGACCG TERM 2848 3815660 - 3815638 - GH 76 -13.4 -3.09844 | overlap 3815637 CTGACACTTGAAAAT GCCATGGCGG CGC CCGCCACGAC CGGATTGAGCAGACC Rmet_3525 3817970 - 3818371 + | heavy metal transport/detoxification protein TERM 2849 3818393 - 3818410 + Tr 100 -12.7 -4.62069 | opp_overlap 3818393 CCGCCAAACAAGAAA GGGCACC CGAG GGTGCCC TTTTTCACGTCCGCG TERM 2850 3818410 - 3818393 - TR 100 -12.7 -4.56978 | opp_overlap 3818393 CCGCCAAACAAGAAA GGGCACC CGAG GGTGCCC TTTTTCACGTCCGCG Rmet_3526 3819161 - 3818436 - | OmpW TERM 2851 3819437 - 3819453 + r 73 -4.3 -4.72272 | overlap 3819432 3819439 TTCGGGTATTGTGCG GAGGCAC TTT GTGTCAC TTTTTGCTGGCCAGC Rmet_3527 3820418 - 3819450 - | ornithine cyclodeaminase Rmet_3528 3821511 - 3820513 - | aldo/keto reductase Rmet_3529 3823752 - 3821572 - | penicillin-binding protein 1C Rmet_3530 3824482 - 3823796 - | YhhN-like protein TERM 2852 3823991 - 3823937 - G 75 -3.3 -4.7373 | gap 1, overlap 3823939 3823940 CGACGCCACGAAAAA CAGGGCGCCGATTGCCGCCAGCGCCG TCGG CAGCGATGCCAGC-ATCGTCGTGCAG GCCATCGCCGCCAGC TERM 2853 3824281 - 3824252 - G 70 -11.3 -3.30124 | opp_overlap 3824254, overlap 3824257 TCCCAGCGCGGAGAA GAGCAGCGCGGTC ACGA GCCAGCGCCGCTC TCCTAGCGGGCGATG Rmet_3531 3830475 - 3824494 - | alpha-2-macroglobulin-like protein TERM 2854 3829373 - 3829355 - G 71 -7.4 -4.13014 | overlap 3829356 3829372 GGCACATCGGCAAAA CGTTCGAC CAC GCCAAACG GCGCGGCGGCGAACT Rmet_3532 3831048 - 3830569 - | AsnC family transcriptional regulator phhA 3831187 - 3832119 + | phenylalanine 4-monooxygenase TERM 2855 3832195 - 3832155 - g 93 -16 -3.90744 | gap 1, opp_overlap 3832155 3832156, overlap 3832156 CGCTTTGTGAAACAA TGCCGGCAAGCCCG-GCCG CTCG CGGCCCGGGCGGGCCGGCC TTCGTCTTACCCTAC TERM 2856 3832155 - 3832195 + G 88 -16 -3.37245 | gap 1, opp_overlap 3832155 3832156, overlap 3832156 CGCTTTGTGAAACAA TGCCGGCAAGCCCG-GCCG CTCG CGGCCCGGGCGGGCCGGCC TTCGTCTTACCCTAC TERM 2857 3832194 - 3832156 - g 93 -19.5 -2.94232 | gap 1, opp_overlap 3832155 3832156, overlap 3832155 GCTTTGTGAAACAAT GCCGGCAAGCCCG-GCCG CTCG CGGCCCGGGCGGGCCGGC CTTCGTCTTACCCTA TERM 2858 3832156 - 3832194 + G 89 -19.5 -2.62026 | gap 1, opp_overlap 3832156 3832155, overlap 3832155 GCTTTGTGAAACAAT GCCGGCAAGCCCG-GCCG CTCG CGGCCCGGGCGGGCCGGC CTTCGTCTTACCCTA phhB 3832154 - 3832531 + | pterin-4-alpha-carbinolamine dehydratase Rmet_3535 3832632 - 3833336 + | two component transcriptional regulator TERM 2859 3834883 - 3834860 - g 80 -11.8 -3.73224 | gap 1 CCATCGTGCATGAAA TCGTGACCCTG CAC CAGGG-CACGA TCCGCATCGAGGATG Rmet_3536 3833371 - 3835053 + | periplasmic sensor signal transduction histidine kinase Rmet_3537 3835599 - 3835087 - | nuclear protein SET TERM 2860 3836086 - 3836071 - H 80 -3.2 -5.14965 | overlap 3836073 3836074 AGGCCGATCAAAAAA CAGGCA GGGG TGCCCA GCAAGCGCCTGAGCC TERM 2861 3836169 - 3836132 - H 76 -13.5 -3.05816 | gap 1 GCACCTCCCAGGCAA CGTATACGCCCCAG-GAG GCG CTCACAGGGCCGTATACG TCCCTGACAGCCTCC Rmet_3538 3836433 - 3836711 + | HU family DNA-binding protein Rmet_3539 3836940 - 3836701 - | hypothetical protein TERM 2862 3836793 - 3836774 - G 70 -11.4 -3.34962 | opp_overlap 3836751 CGCCAGACGCCAGAA CTGGCGCA GGTG CGCGCCAG GCGGGGGACGTTATC Rmet_3540 3836950 - 3837930 + | hypothetical protein Rmet_3541 3838106 - 3838990 + | major intrinsic protein Rmet_3542 3840821 - 3838974 - | hypothetical protein TERM 2863 3841157 - 3841121 - g 87 -7.7 -4.78572 | opp_overlap 3841155, overlap 3841123 CGGCAAGGAAGAAAA GCCCGCCGCGCCGGCAG CAT CGGCCAGCGCCCCAGCC GCCCCTGCTGTCATC Rmet_3543 3841041 - 3842180 + | twin-arginine translocation pathway signal TERM 2864 3842215 - 3842189 - f 100 -19.5 -3.97368 | GCTGTAAGCCACAAA CGCCCCTCTCC CGCGC GGAGAGGGGCG AGTGGAGAGGGCCGG Rmet_3544 3842331 - 3843245 + | rarD protein TERM 2865 3843303 - 3843269 - f 84 -11.5 -4.10437 | gap 1 CTATTAAGTAAATAA TTTGCGGGAGAGCCAG CTGA CAGGCCCTCC-GCAAA ATCCGGGCGCGGCAC Rmet_3545 3843361 - 3844542 + | UMUC-like DNA-repair protein Rmet_3546 3844603 - 3845799 + | major facilitator transporter TERM 2866 3847237 - 3847202 - g 75 -7.5 -4.32649 | gap 2, overlap 3847203 AGTTCAAAAAGGAAA CGGCCCGCCGGCAGCGC GATG GCAC-GCCG-CTGGCCA TGCTGATGCTCGACA Rmet_3547 3845944 - 3847707 + | diguanylate cyclase Rmet_3548 3848263 - 3847769 - | hypothetical protein Rmet_3549 3848675 - 3849643 + | hypothetical protein TERM 2867 3849909 - 3849921 + G 79 -10.5 -4.08557 | CGGCGTCGCCATCCT GGCGG TGT CCGCC TTCTTCTTTGCCGGA Rmet_3550 3849796 - 3850344 + | hypothetical protein TERM 2868 3850712 - 3850681 - g 84 -13.7 -3.63515 | gap 1, opp_overlap 3850674, overlap 3850666 CCTGATGGCCAAGAA CGGCCGTG-CCGGC CCGGC GCTGGCCACGGCCG CGATCGGTTCCTTCG Rmet_3551 3850373 - 3851887 + | hypothetical protein TERM 2869 3851929 - 3851948 + F 79 -15 -2.90075 | overlap 3851931 CCCGGCGGGTTTGGG CAGGGGGC TTCG GCCCCCTG TATCATTGGCGCAAA Rmet_3552 3851993 - 3852409 + | phenylacetic acid degradation-related protein Rmet_3553 3852418 - 3853329 + | patatin TERM 2870 3853500 - 3853462 - g 81 -9.4 -4.2361 | opp_overlap 3853464 3853496, overlap 3853463 AAGACAACGGCAAAA GCCCGGCGCCGCGCCA GTGAGGT TAGCGCGGAGCCGGTT GTCGAGCGTGTGCCG TERM 2871 3853499 - 3853463 - g 72 -12.9 -3.13081 | opp_overlap 3853464 3853496, overlap 3853462 AGACAACGGCAAAAG CCCGGCGCCGCGCCA GTGAGGT TAGCGCGGAGCCGGT TGTCGAGCGTGTGCC TERM 2872 3853464 - 3853498 + G 88 -15.6 -3.30771 | opp_overlap 3853463 3853462, overlap 3853496 GACAACGGCAAAAGC CCGGCGCCGCGCCAGT GAG GTTAGCGCGGAGCCGG TTGTCGAGCGTGTGC Rmet_3554 3853411 - 3854892 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rmet_3555 3855810 - 3854902 - | LysR family transcriptional regulator Rmet_3556 3855995 - 3857416 + | amidase Rmet_3557 3857430 - 3857639 + | hypothetical protein Rmet_3558 3857658 - 3859043 + | Na+/solute symporter TERM 2873 3859124 - 3859153 + T 95 -20.9 -3.14468 | opp_overlap 3859124 3859130, overlap 3859130 TGCAGAACGCAAAAA GCAAAACGGACGC CGAA GCGTCCGTTTTGC TTGAATCTGGTGGCC TERM 2874 3859153 - 3859124 - T 100 -20.9 -4.78149 | opp_overlap 3859124 3859130, overlap 3859130 TGCAGAACGCAAAAA GCAAAACGGACGC CGAA GCGTCCGTTTTGC TTGAATCTGGTGGCC TERM 2875 3859130 - 3859147 + T 100 -12.7 -4.44548 | opp_overlap 3859124 3859130, overlap 3859124 ACGCAAAAAGCAAAA CGGACGC CGAA GCGTCCG TTTTGCTTGAATCTG TERM 2876 3859147 - 3859130 - T 100 -12.7 -4.78661 | opp_overlap 3859130 3859124, overlap 3859124 ACGCAAAAAGCAAAA CGGACGC CGAA GCGTCCG TTTTGCTTGAATCTG Rmet_3559 3860010 - 3859294 - | response regulator receiver domain-containing protein Rmet_3560 3862550 - 3860067 - | multi-sensor signal transduction histidine kinase TERM 2877 3861461 - 3861486 + g 75 -6.7 -4.35461 | gap 1, overlap 3861462 TGCCAATGTACATCT TGCGC-AGGCCG GTG CGGCCCAGCGCC TTTTCCTGATATTCC Rmet_3561 3863377 - 3862547 - | putative periplasmic ligand-binding sensor protein TERM 2878 3863031 - 3863017 - G 75 -10 -3.83205 | opp_overlap 3863017 3863014 ACGGCTGATAGGAAA TGCGCA CCG TGCGCA TGGTGTTGACCGGCT Rmet_3562 3864760 - 3863387 - | sun protein TERM 2879 3864857 - 3864827 - R 100 -13.3 -4.8048 | gap 1, opp_overlap 3864826 3864853, overlap 3864852 TGCGGATACGAAAAA GCCCGCCG-GCTCC TGAC GGAACACAGCGGGC AGTTTACCCGTTACC Rmet_3563 3865766 - 3864906 - | heat shock protein HtpX fmt 3866965 - 3865931 - | methionyl-tRNA formyltransferase TERM 2880 3866979 - 3866951 - G 95 -13.2 -4.41047 | opp_overlap 3866949 3866947 3866945 3866951, overlap 3866954 3866956 ATTCCGCAATGAAAA CG-ACACCGGCCGC ATA GCGGCCGG-GTACG TATGTGTTCTTCGGA TERM 2881 3866951 - 3866979 + g 74 -13.2 -3.19509 | opp_overlap 3866951 3866954 3866956, overlap 3866949 3866947 3866945 ATTCCGCAATGAAAA CG-ACACCGGCCGC ATA GCGGCCGG-GTACG TATGTGTTCTTCGGA TERM 2882 3866975 - 3866954 - G 78 -13.7 -3.18268 | gap 1, opp_overlap 3866951 3866949 3866947 3866945, overlap 3866951 3866956 CCGCAATGAAAACGA CACCGGCCGC ATA GCGGCCGG-G TACGTATGTGTTCTT TERM 2883 3866974 - 3866956 - G 88 -17.4 -3.14708 | opp_overlap 3866951 3866949 3866947 3866945, overlap 3866954 3866951 GCAATGAAAACGACA CCGGCCGC ATA GCGGCCGG GTACGTATGTGTTCT def 3867551 - 3867045 - | peptide deformylase Rmet_3566 3867815 - 3868891 + | peptidoglycan-binding LysM Rmet_3567 3868930 - 3870045 + | DNA processing protein DprA, putative Rmet_3568 3870082 - 3870471 + | hypothetical protein TERM 2884 3871619 - 3871609 - g 72 -6.8 -4.25104 | overlap 3871615 GGCGCTGTACGAAAA GCAC AAG GTGC TGACGTACCCGCGTA Rmet_3569 3870647 - 3873322 + | DNA topoisomerase III TERM 2885 3873340 - 3873394 + T 95 -20.9 -2.6381 | gap 1, opp_overlap 3873326 3873356, overlap 3873350 3873356 3873388 ACTTACCTTCTGGCA TCACGGGAAGGT-AAAACGGCGGGGC GCGA GCCCCGCCGTTTTCACTTTGCCGCGG TCATCTGCGGCTTGT TERM 2886 3873350 - 3873384 + T 100 -19.5 -3.54741 | gap 1, opp_overlap 3873326 3873356, overlap 3873340 3873356 TGGCATCACGGGAAG GT-AAAACGGCGGGGC GCGA GCCCCGCCGTTTTCAC TTTGCCGCGGTCATC TERM 2887 3873377 - 3873356 - T 100 -18.7 -4.2803 | opp_overlap 3873350 3873340 3873356 CACGGGAAGGTAAAA CGGCGGGGC GCGA GCCCCGCCG TTTTCACTTTGCCGC TERM 2888 3873356 - 3873377 + T 100 -18.7 -4.35524 | opp_overlap 3873356, overlap 3873350 3873340 CACGGGAAGGTAAAA CGGCGGGGC GCGA GCCCCGCCG TTTTCACTTTGCCGC TERM 2889 3873388 - 3873405 + T 76 -10.5 -3.83568 | overlap 3873340 CGCCGTTTTCACTTT GCCGCGG TCAT CTGCGGC TTGTTCTCCGTGTCC Rmet_3570 3874313 - 3873381 - | LysR family transcriptional regulator Rmet_3571 3874482 - 3874754 + | hypothetical protein TERM 2890 3874778 - 3874801 + T 100 -13.9 -5.29846 | opp_overlap 3874778 AGGCATTCCGCAAAA GCCCGTACC CTCACC GGTACGGGC TTTTTGTTTGGGCTT TERM 2891 3874801 - 3874778 - T 95 -13.9 -4.09864 | opp_overlap 3874778 AGGCATTCCGCAAAA GCCCGTACC CTCACC GGTACGGGC TTTTTGTTTGGGCTT TERM 2892 3874864 - 3874846 - T 100 -13.1 -5.18371 | opp_overlap 3874846 3874841 3874839 3874835 CCGGACAAAAGAAAA CGGGCCC GTTCA GGGCCCG TAGTCTATTCCTTTG Rmet_3572 3875327 - 3874884 - | 17 kDa surface antigen TERM 2893 3875524 - 3875507 - R 100 -12.7 -5.5112 | opp_overlap 3875507 3875506 GCCACCAATAAAAAA GCGACCC AGCT GGGTCGC CTTGTCTTGCCTGCG Rmet_3573 3875757 - 3875563 - | hypothetical protein Rmet_3574 3877849 - 3875774 - | carbon starvation protein CstA Rmet_3575 3878196 - 3879623 + | periplasmic sensor signal transduction histidine kinase Rmet_3576 3879620 - 3880306 + | two component LuxR family transcriptional regulator TERM 2894 3880372 - 3880346 - T 100 -19.5 -5.95539 | opp_overlap 3880346 GCCCAAACAAAAAAA CGCCGAACGGC GGCAA GCCGTTCGGCG TTTTTCCTTAACGCG TERM 2895 3880346 - 3880372 + T 100 -19.5 -4.8622 | opp_overlap 3880346 GCCCAAACAAAAAAA CGCCGAACGGC GGCAA GCCGTTCGGCG TTTTTCCTTAACGCG Rmet_3577 3882251 - 3880395 - | phosphoenolpyruvate carboxykinase Rmet_3578 3882690 - 3883790 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_3579 3883958 - 3884326 + | calcium-binding EF-hand TERM 2896 3884521 - 3884490 - f 70 -10.8 -3.54129 | gap 1 TACACTCGGTGCAAA GCCG-ACGCGCGGCA GCA TGACGCGCGCGCAGC CCCGCACACGCAAGG Rmet_3580 3884547 - 3885203 + | MOSC domain-containing protein TERM 2897 3885225 - 3885246 + F 74 -5.7 -4.50583 | GCCAATCCCGCGTTA GTCCGGGGT GGCC GCCACGGGC TTTTCTGCTAATGTT TERM 2898 3885422 - 3885403 - f 73 -9.2 -3.85698 | overlap 3885417 GTTTGCGCGGATAAA GCCGGCCC GATG AAGCCGGC GCCAAGGGGGAGTCG TERM 2899 3885517 - 3885475 - g 71 -4.1 -4.48987 | gap 1, overlap 3885484 TCCTCATAATGAAAA CAGATGGAATCGAC-CAGCC GAAG GGCTTTGTCGATGGCAACTG GAGCGCGGCCGCCGG TERM 2900 3886469 - 3886483 + G 89 -12.8 -4.06055 | ACAGGCCATCGTGGC CGGCCC CGA GGGCCG TTTCGTTTACACCGT Rmet_3581 3885468 - 3886691 + | secretion protein HlyD TERM 2901 3887175 - 3887224 + G 76 -5.8 -4.56597 | gap 3, opp_overlap 3887175 3887176, overlap 3887176 CGCGTTTGGCGATAA CCTG-ATCTCGC-CGACGCTGGCCA CAC TGCCCGGCGTCGCGC-AGGTGCAGA TTTTTGGCCAGAAGC TERM 2902 3889731 - 3889760 + G 72 -8.5 -3.97088 | gap 1 GGGCGCGGAACTGCG CCAGCCGCT-CGGC TTG GCCGTGGTGGGTGG TTTGCTGTTCTCGCA Rmet_3582 3886696 - 3889905 + | acriflavin resistance protein Rmet_3583 3889990 - 3890826 + | hypothetical protein Rmet_3584 3892338 - 3890851 - | histidine kinase Rmet_3585 3893012 - 3892338 - | two component transcriptional regulator TERM 2903 3894013 - 3894052 + G 72 -13.4 -3.14132 | CGGGATTGCCGTCAT CGCGCCGCGCGACTACAC CCTG GTGATGTCGCGCGTGGCG TTCATCGCGCGGCAG Rmet_3586 3893210 - 3894325 + | hypothetical protein Rmet_3587 3895121 - 3894393 - | TetR family transcriptional regulator TERM 2904 3895502 - 3895462 - H 84 -5.3 -4.99043 | overlap 3895457 3895463 3895464 CCTGTAGAAAGAAAA GCGTTTCCATCCACCGC CTTGCGT GCGGCGGCTGGCAACAA GCAAGAACCTGTTTG TERM 2905 3895704 - 3895688 - g 73 -9.3 -3.85698 | GCCTGCGGCCAGAAA GCCCCGC AGG GCGGCGC GATGCCGCCTCCGGA Rmet_3588 3895613 - 3896860 + | secretion protein HlyD Rmet_3589 3896887 - 3900039 + | hydrophobe/amphiphile efflux-1 HAE1 Rmet_3590 3900042 - 3901517 + | RND efflux system, outer membrane lipoprotein, NodT TERM 2906 3901543 - 3901567 + T 100 -16.5 -4.78149 | opp_overlap 3901543 CGGTTCAGCAAAAAA GGGCGAAGCTT TCA AGGCTTCGCCC TTTTTGCGTTGTGGC TERM 2907 3901567 - 3901543 - T 100 -14.3 -5.14563 | opp_overlap 3901543 CGGTTCAGCAAAAAA GGGCGAAGCTT TCA AGGCTTCGCCC TTTTTGCGTTGTGGC Rmet_3591 3902452 - 3901592 - | OmpW Rmet_3592 3903756 - 3902470 - | putative lipoprotein Rmet_3593 3905119 - 3903809 - | putative lipoprotein TERM 2908 3905420 - 3905456 + r 72 -2.9 -4.8543 | overlap 3905422 3905423 TCAGAACTTGTATTC GCTGTTCGAGGGATCGA AGG TCGATGCGTCGAAGGTC TTTTTCTGGGCCTTC Rmet_3594 3906304 - 3905405 - | putative lipoprotein transmembrane TERM 2909 3905503 - 3905517 + g 72 -11.4 -3.54424 | CGACCATGTTGCCGT CCGCGT CCC ACGCGG TTTCCGCGCGTGGCC Rmet_3595 3907453 - 3906512 - | TetR family transcriptional regulator TERM 2910 3907170 - 3907112 - G 75 -14.6 -2.78216 | gap 3 CAGGCGCAGGAACGA TGGGC-CGCCGATCTCGGGCTCGCGCGCC ATCT GGAGCGCGGGCACGA-A-CAGCGCGCCCA TCACGTGTTCGCAGC TERM 2911 3907629 - 3907645 + r 84 -9.3 -4.47183 | TCCTCTAAATTGCAG GCCCGAC TGC GACGGGC TTTATTTGGATCATG Rmet_3596 3909251 - 3907656 - | glucose-methanol-choline oxidoreductase TERM 2912 3908868 - 3908887 + g 79 -10 -4.08216 | gap 1 GGTTACAGCGTGCTC CG-TGGCCC AAT GGGCCAGCG TTTTCGGGGGCGTGC Rmet_3597 3909841 - 3909260 - | hypothetical protein TERM 2913 3909918 - 3909935 + H 100 -3.4 -5.75342 | overlap 3909912 CGAGTTGCGTTGCGA TTCTGC CGAAGC GCAGGA TTTTTTTTCACCCCC TERM 2914 3909983 - 3909994 + H 74 -7.2 -4.42386 | opp_overlap 3909966 3909967 CGCGACTGACTGCCG CCGC CGAT GCGG TTTTCTCGGTGCGCA TERM 2915 3910639 - 3910676 + G 72 -13.4 -3.05343 | GCCCGGATCCTGGTC TCGGGGATGGGCGGGC TCAGCC GCCCTGCCATTCCCGA TATTCCCGGTCTCGA Rmet_3598 3910186 - 3911760 + | flavin-containing monooxygenase FMO Rmet_3599 3911838 - 3912728 + | short-chain dehydrogenase/reductase SDR Rmet_3600 3912725 - 3913726 + | alpha/beta hydrolase fold Rmet_3601 3913723 - 3914595 + | FF domain-containing protein Rmet_3602 3915523 - 3914642 - | MerR family transcriptional regulator Rmet_3603 3915541 - 3916479 + | LysR family transcriptional regulator Rmet_3604 3916544 - 3917614 + | hypothetical protein Rmet_3605 3917632 - 3918606 + | succinylglutamate desuccinylase/aspartoacylase Rmet_3606 3919328 - 3918729 - | hypothetical protein TERM 2916 3919185 - 3919145 - G 78 -13.9 -3.25896 | overlap 3919143 3919146 GGATGATGCAGAACA GCGCGCCATCGGCACCCAC CAC GTGATTGCCGTTGACGCGG AACTGCGCCGGTCCG TERM 2917 3919184 - 3919146 - G 83 -17.4 -2.55216 | overlap 3919145 3919143 GATGATGCAGAACAG CGCGCCATCGGCACCCAC CAC GTGATTGCCGTTGACGCG GAACTGCGCCGGTCC TERM 2918 3919501 - 3919469 - R 70 -9.8 -3.55761 | gap 1, opp_overlap 3919471 3919474 CACTGATGCCGCAAA TCTCCCGC-GTGCCG CGCA CGGCACCGCGCGGGA CGGCGATTTAATTGG Rmet_3607 3920075 - 3919509 - | hypothetical protein TERM 2919 3919853 - 3919839 - G 74 -11.4 -3.56643 | opp_overlap 3919838 3919841, overlap 3919842 GCGATAGTCGGCAAA CAGGCC ATC GGCCTG GTATTGGGGCAGGAC Rmet_3608 3920731 - 3920135 - | TetR family transcriptional regulator TERM 2920 3920294 - 3920323 + g 79 -6.4 -4.58283 | overlap 3920296 GGCGGCGTTGCCGCC CGGCTGGATGCT GGCCAG AACATCCAGCAG TTTTTCGAGCCCTTC Rmet_3609 3921334 - 3920744 - | hypothetical protein trmE 3922808 - 3921381 - | tRNA modification GTPase TrmE TERM 2921 3922281 - 3922310 + g 81 -7.7 -4.56597 | overlap 3922285 GGGAAAGTCCAGCGT GGCTTCCACCAGC ATTC GCAGGTGGATGAC TTTTTCCACAAGCGC Rmet_3611 3923622 - 3922861 - | hypothetical protein TERM 2922 3922897 - 3922923 + g 78 -13.6 -3.28497 | opp_overlap 3922887, overlap 3922893 TATCAGCCTGTGCGC CACGGCGTCGTC GAT GACGCCGCCGAG TTCGGTTTGGCGTGC Rmet_3612 3924499 - 3923729 - | methyltransferase type 11 TERM 2923 3924607 - 3924577 - R 100 -16.3 -4.56775 | opp_overlap 3924584, overlap 3924584 ACGTGCGCCGAAAAA GAAAAAACCCGGC AGGAG GCCGGGTTTTTCC AGGTTCGGGGTCGGA TERM 2924 3924600 - 3924584 - R 100 -10.8 -5.93252 | opp_overlap 3924584, overlap 3924577 CCGAAAAAGAAAAAA CCCGGC AGGAG GCCGGG TTTTTCCAGGTTCGG TERM 2925 3924584 - 3924600 + r 89 -10.8 -4.62471 | opp_overlap 3924584 3924577 CCGAAAAAGAAAAAA CCCGGC AGGAG GCCGGG TTTTTCCAGGTTCGG Rmet_3613 3926300 - 3924633 - | putative inner membrane protein translocase component YidC TERM 2926 3924672 - 3924711 + g 71 -10 -3.61398 | CTTGCCCTTGCCGAG CATCCGGTTGATCTGCCA TTGC TGGGCGATCGACAGGATG TTGTTCACCACCCAG Rmet_3614 3926613 - 3926323 - | hypothetical protein Rmet_3615 3927779 - 3926622 - | ribonuclease P protein component TERM 2927 3926858 - 3926906 + g 71 -7.3 -4.15044 | gap 1, opp_overlap 3926884, overlap 3926859 GGCTCCGAAACAGTT CCCGCACCATGCGCTTCACGAG ATTACG CTCG-GCCGCGCGTGGTGCGAA TTTCTTGCCGACGAC TERM 2928 3927032 - 3927001 - G 72 -11 -3.53012 | opp_overlap 3927006 3927008, overlap 3927002 3927008 CGCCGGGGCCGCAAA GCAAAAACGGATGA AAAC TCATCCGTCTTTGT GAGCCTCGCGGCTTT TERM 2929 3927031 - 3927002 - G 75 -14.5 -2.71712 | opp_overlap 3927006 3927008, overlap 3927001 3927008 GCCGGGGCCGCAAAG CAAAAACGGATGA AAAC TCATCCGTCTTTG TGAGCCTCGCGGCTT TERM 2930 3927025 - 3927008 - G 100 -9.9 -4.98531 | opp_overlap 3927006 3927008, overlap 3927002 3927001 GCCGCAAAGCAAAAA CGGATGA AAAC TCATCCG TCTTTGTGAGCCTCG SEQUENCE gi|94312547|ref|NC_007974.1| Ralstonia metallidurans CH34 chromosome 2, complete sequence (length 2580084) Rmet_3616 919 - 530 - | OsmC-like protein TERM 1 1195 - 1183 - H 83 -2.7 -5.252 | GACCGGCAGAAAAAA GTTCT GCA AAAAC TGTTGACGAAACGCT TERM 2 3282 - 3328 + H 95 -20.4 -3.01712 | opp_overlap 3288 3296 3297, overlap 3288 3294 3296 TACCTTGGGGTTGTA GTCAAAGACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTCTTTGGC TGTTGCCAACAGGCG TERM 3 3322 - 3288 - H 73 -10 -3.64703 | opp_overlap 3282 3288 3294 3296, overlap 3296 3297 GGGGTTGTAGTCAAA GACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTC TTTGGCTGTTGCCAA TERM 4 3288 - 3322 + H 93 -14.4 -3.76373 | opp_overlap 3288 3296 3297, overlap 3282 3294 3296 GGGGTTGTAGTCAAA GACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTC TTTGGCTGTTGCCAA TERM 5 3294 - 3316 + H 77 -8.4 -4.35646 | opp_overlap 3288 3296 3297, overlap 3288 3282 3296 GTAGTCAAAGACAAG AATTCAGGCG AGG CGCCTGAGTG TTTGTCTTTGGCTGT TERM 6 3314 - 3296 - H 76 -8.8 -4.04188 | opp_overlap 3294 3288 3282 3296, overlap 3288 3297 AGTCAAAGACAAGAA TTCAGGCG AGG CGCCTGAG TGTTTGTCTTTGGCT TERM 7 3296 - 3314 + H 80 -11 -3.77188 | opp_overlap 3296 3288 3297, overlap 3294 3288 3282 AGTCAAAGACAAGAA TTCAGGCG AGG CGCCTGAG TGTTTGTCTTTGGCT TERM 8 3313 - 3297 - H 72 -12.3 -3.01428 | opp_overlap 3296 3294 3288 3282, overlap 3296 3288 GTCAAAGACAAGAAT TCAGGCG AGG CGCCTGA GTGTTTGTCTTTGGC TERM 9 3487 - 3454 - H 75 -2.5 -4.90266 | TGTATCAACCAAAAA GTATTTAAAGTGATC GAAA GATGACTTGGAATAC GGCACAAACGCGAGA TERM 10 4041 - 4030 - H 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 11 6667 - 6701 + H 95 -14.4 -4.07687 | opp_overlap 6673, overlap 6668 6673 GCCAGGCTCTTATAC CCAAAACCCCCAGC CCCATAA GCTGGGGGTTTTGC TTTTGCCGGCGCGGT TERM 12 6668 - 6700 + H 89 -17.9 -3.04398 | opp_overlap 6673, overlap 6667 6673 CCAGGCTCTTATACC CAAAACCCCCAGC CCCATAA GCTGGGGGTTTTG CTTTTGCCGGCGCGG TERM 13 6695 - 6673 - H 100 -13.4 -4.2349 | opp_overlap 6673 6668 6667 CTCTTATACCCAAAA CCCCCAGCCC CAT AAGCTGGGGG TTTTGCTTTTGCCGG TERM 14 6673 - 6695 + H 95 -12 -4.67038 | opp_overlap 6673, overlap 6668 6667 CTCTTATACCCAAAA CCCCCAGC CCCATAA GCTGGGGG TTTTGCTTTTGCCGG Rmet_3617 6798 - 7094 + | excinuclease ABC subunit C TERM 15 7097 - 7125 + T 100 -20.5 -4.16016 | opp_overlap 7097 7103, overlap 7103 AACGTATCCATAAAA GAAAAAGCCGGCA AAA TGCCGGCTTTTTC TTTCTTCACACGTGA TERM 16 7125 - 7097 - T 100 -20.5 -4.43501 | opp_overlap 7097 7103, overlap 7103 AACGTATCCATAAAA GAAAAAGCCGGCA AAA TGCCGGCTTTTTC TTTCTTCACACGTGA TERM 17 7119 - 7103 - T 100 -13.7 -5.54907 | opp_overlap 7097 7103, overlap 7097 TCCATAAAAGAAAAA GCCGGCA AAA TGCCGGC TTTTTCTTTCTTCAC TERM 18 7103 - 7119 + T 100 -13.7 -5.47159 | opp_overlap 7103 7097, overlap 7097 TCCATAAAAGAAAAA GCCGGCA AAA TGCCGGC TTTTTCTTTCTTCAC Rmet_3618 7570 - 7148 - | OsmC-like protein TERM 19 7325 - 7353 + g 93 -3.3 -5.46657 | overlap 7325 GATACCGACCGCGCC TT-CGATCTTCGC GTCAG GCGA-GATCGCAA TTTTTTGTTGCCCTG Rmet_3619 8120 - 7632 - | MarR family transcriptional regulator TERM 20 8932 - 8951 + G 76 -13.6 -3.06183 | opp_overlap 8925 8926 GTCGAAAACCCGCGT TGGCGAGC CGGT GCTCGCCA TTGGGTCCCCGTACG Rmet_3620 8366 - 9829 + | peptidase S1C, Do TERM 21 9910 - 9866 - f 76 -13.7 -3.01791 | overlap 9890 9891 ACGGTCCTCGCAACA CGTATACGGGACGTATACC GTAAACG GGTATACGTCCCGCAAACC CTTGCCAGAAGCGGA Rmet_3621 10055 - 10378 + | hypothetical protein Rmet_3622 12080 - 10503 - | major facilitator transporter Rmet_3623 12574 - 12077 - | MarR family transcriptional regulator Rmet_3624 14676 - 12661 - | transglutaminase-like protein TERM 22 14647 - 14659 + g 73 -9.1 -3.8646 | ATGGCCGAGGGGCCG GACCG CGA CGGTC TTTGCCTTCTTGCTC Rmet_3625 15623 - 14673 - | hypothetical protein Rmet_3626 16637 - 15711 - | ATPase TERM 23 16670 - 16709 + H 93 -17.3 -3.28712 | gap 1 TCGGGTTGGAGGCAG TGGCCGGATTCTTGC-CG TCGGC CGTGCAAGGGTCCGGCCA TTGTAGCGGCGCACG Rmet_3627 16891 - 17736 + | phytanoyl-CoA dioxygenase TERM 24 17794 - 17821 + T 100 -17.2 -3.6502 | opp_overlap 17794 17800, overlap 17800 CGAATCGCCGACAAA TAAAAACCGCCC CTCG GGGCGGTTTTTA TTTGGGTGCGCGGTG TERM 25 17821 - 17794 - T 100 -17.2 -3.87869 | opp_overlap 17794 17800, overlap 17800 CGAATCGCCGACAAA TAAAAACCGCCC CTCG GGGCGGTTTTTA TTTGGGTGCGCGGTG TERM 26 17815 - 17800 - T 100 -11.8 -5.38054 | opp_overlap 17794 17800, overlap 17794 GCCGACAAATAAAAA CCGCCC CTCG GGGCGG TTTTTATTTGGGTGC TERM 27 17800 - 17815 + T 100 -11.8 -5.30616 | opp_overlap 17800 17794, overlap 17794 GCCGACAAATAAAAA CCGCCC CTCG GGGCGG TTTTTATTTGGGTGC Rmet_3628 18022 - 17840 - | hypothetical protein Rmet_3629 18972 - 18232 - | GntR family transcriptional regulator Rmet_3630 20109 - 19105 - | oxidoreductase FAD/NAD(P)-binding Rmet_3631 20606 - 20127 - | hypothetical protein Rmet_3632 22079 - 20631 - | aldehyde dehydrogenase TERM 28 21758 - 21744 - G 72 -11.4 -3.50393 | CTCCACGGCATAGAA GCGCAG GGT CTGCGC AGAGCGCATGACCTC Rmet_3633 22871 - 22155 - | TENA/THI-4 protein TERM 29 23003 - 22987 - R 100 -9.4 -4.82901 | opp_overlap 22985 TTGGGCCGACAAAAA TGCCGC ACACG GCGGCA GGTTCATCGGAATGG Rmet_3634 23998 - 23021 - | ornithine cyclodeaminase TERM 30 24069 - 24086 + H 93 -8.3 -5.07107 | overlap 24083 CACATTCCGTGCGCT GGAGCGG AAAT CCGCCCC TTTTTTGGGGATTTC Rmet_3635 24219 - 25757 + | hypothetical protein Rmet_3636 25810 - 26112 + | ferredoxin Rmet_3637 26152 - 26472 + | hypothetical protein Rmet_3638 26469 - 26828 + | ferredoxin Rmet_3639 27768 - 26857 - | IclR family transcriptional regulator Rmet_3640 27939 - 28805 + | LysR family transcriptional regulator Rmet_3641 29149 - 28877 - | hypothetical protein TERM 31 29305 - 29348 + r 71 -6.7 -4.19704 | gap 2, overlap 29306 GTTCCTGTCTGTGGT AGC-GTGGCGCGCCGGA-CAC TTGC GTCATCCGGTGCGCTACCGCA TTTTAAATGCCGTTC Rmet_3642 29970 - 29362 - | protein of unknown function YGGT Rmet_3643 30063 - 30572 + | MarR family transcriptional regulator Rmet_3644 30732 - 31472 + | 17 kDa surface antigen Rmet_3645 32258 - 31548 - | dienelactone hydrolase TERM 32 32402 - 32378 - R 100 -17.2 -5.40072 | GTCCGCGCAAAAAAA CCGGCATCCG GGGGA CGGATGCCGG CATTGGCCGGGCGAC Rmet_3646 32865 - 32446 - | putative signal peptide protein Rmet_3647 33171 - 33377 + | hypothetical protein Rmet_3648 35105 - 33429 - | putative activation/secretion signal peptide protein Rmet_3649 36840 - 35257 - | hypothetical protein TERM 33 36529 - 36559 + g 85 -11.9 -4.15654 | gap 1, overlap 36534 CGCGCTGGTCGGCGT CAGC-GCGGCGGTG GTGC CACCGCCGTTGTTG TTGTTGTTGTTGTTG TERM 34 36534 - 36553 + g 95 -15 -4.15654 | overlap 36529 TGGTCGGCGTCAGCG CGGCGGTG GTGC CACCGCCG TTGTTGTTGTTGTTG TERM 35 37070 - 37052 - H 71 -9.5 -3.74693 | opp_overlap 37051 37048 GGGTAGCCGATCAAA CGCCCGC ATCAA GCGGACG GTGGTTGTGGGAAGT TERM 36 37093 - 37120 + H 76 -9.8 -3.72576 | opp_overlap 37111, overlap 37092 TGGGAAGTGGGCGAG GCGTTACGCGTT ACGT AACGCGCGGCGC TTTCGTAACGCGCCG Rmet_3650 37346 - 38575 + | putative hemagglutinin-related transmembrane protein TERM 37 38695 - 38753 + F 100 -18.1 -4.68103 | gap 1, overlap 38696 38697 GCGGCGCATCCTTTT ATTGCG-CGCCGTGCCGCGTCCCGCATG TCGG CGTGCAGGATGCGGCACGGCGGTGCCGG TTTTATTGCCCTTCA TERM 38 38696 - 38752 + F 100 -21.6 -3.40139 | gap 1, overlap 38695 38697 CGGCGCATCCTTTTA TTGCG-CGCCGTGCCGCGTCCCGCATG TCGG CGTGCAGGATGCGGCACGGCGGTGCCG GTTTTATTGCCCTTC TERM 39 38697 - 38751 + F 100 -22.9 -2.6336 | gap 1, overlap 38696 38695 GGCGCATCCTTTTAT TGCG-CGCCGTGCCGCGTCCCGCATG TCGG CGTGCAGGATGCGGCACGGCGGTGCC GGTTTTATTGCCCTT TERM 40 39061 - 39035 - g 73 -5.8 -4.41047 | overlap 39053 ATGCGTCAAGTAAAA GCGTCCCTCTTT CGC AAAGCGCAACGC GGAGCGACTGCCATC Rmet_3651 39020 - 39211 + | Flp/Fap pilin component Rmet_3652 39549 - 40010 + | TadE-like protein Rmet_3653 40085 - 41044 + | Flp pilus assembly CpaB Rmet_3654 41058 - 42479 + | type II and III secretion system protein TERM 41 42671 - 42721 + G 84 -14.1 -3.57561 | gap 2, overlap 42676 42676 TTGCTCGATTTCACG CAGTCGCGCGCGATCGACTCGGC GCGGCTG GCCGAGCAGATCGCGCG-G-CTG TTTCCGCAGTTGCCG TERM 42 42676 - 42718 + G 74 -14.8 -2.6162 | overlap 42676 42671 CGATTTCACGCAGTC GCGCGCGATCGACTCGGC GCGGCTG GCCGAGCAGATCGCGCGG CTGTTTCCGCAGTTG TERM 43 42676 - 42719 + G 84 -14.6 -3.36569 | gap 1, overlap 42671 42676 CGATTTCACGCAGTC GC-GCGCGATCGACTCGGC GCGGCTG GCCGAGCAGATCGCGCGGC TGTTTCCGCAGTTGC TERM 44 43189 - 43207 + G 72 -8.9 -4.07885 | overlap 43164 GCCGGCCAGTCTGGC CGAGATG CGCGA CATCTCG TTTTCCGAGGCCATG TERM 45 43454 - 43399 - g 77 -11.9 -3.66018 | GCAGGAGCTGAAGAA GCGCGAGGTCGA-GCGCGATGACCTGC ATCT GCTGGT-ATCGCGCTTCGACGCCGAAC TCGGGGTCGATGCGG Rmet_3655 42491 - 43729 + | response regulator receiver domain-containing protein TERM 46 43863 - 43888 + G 70 -5.4 -4.45083 | gap 1 GGCGCCGAGTTCGGG CGCTGG-TCGC GCGCG GCCATCCAGCG TTTTGTCGATCTGGA Rmet_3656 43731 - 45047 + | type II secretion system protein E Rmet_3657 45037 - 45966 + | type II secretion system protein Rmet_3658 45976 - 47085 + | type II secretion system protein Rmet_3659 47086 - 47907 + | TPR repeat-containing protein Rmet_3660 47904 - 48272 + | putative lipoprotein Rmet_3661 48281 - 50008 + | putative transmembrane protein Rmet_3662 50020 - 51384 + | sigma-54 dependent trancsriptional regulator Rmet_3663 51481 - 52626 + | exodeoxyribonuclease I subunit D TERM 47 53604 - 53578 - g 73 -14.4 -2.85606 | overlap 53570 CCAGACAGGATCAGA CGGCCGCACTCG CCG CGAATGCCGCCG CCGGGACACGCGTGG Rmet_3664 52623 - 55676 + | exonuclease SbcC, putative TERM 48 55843 - 55819 - f 73 -4.2 -4.69053 | overlap 55820 55823 GAGCACTTAATAAAA TGTAGTTCCG CCTAT CGGAACTTCG AGGGAGGGGAGGCTG TERM 49 55854 - 55876 + F 77 -4.1 -4.90869 | gap 1 CTTCGAGGGAGGGGA GGCTGCGACG AATC CGTC-TGGCC TTTTTCCTTCCTGCT Rmet_3665 55921 - 57357 + | hypothetical protein TERM 50 57382 - 57439 + F 95 -16.4 -3.90588 | opp_overlap 57386, overlap 57387 ACTGCGATTCCGCAA GGCATCGGCGGGCGTTGCGCA-CTACCA TGCG TGGTAGCTGTGCATCGCCCACCG-TACC TTTGGTTCAAGCCTG TERM 51 57436 - 57386 - f 83 -16.9 -2.52896 | gap 1, opp_overlap 57382 57387 CGATTCCGCAAGGCA TCGGCGGGCGTTGCGCA-CTACCA TGCG TGGTAGCTGTGCATCGCCCACCGT ACCTTTGGTTCAAGC TERM 52 57387 - 57435 + F 95 -20.4 -2.70979 | gap 1, opp_overlap 57386, overlap 57382 GATTCCGCAAGGCAT CGGCGGGCGTTGCGCA-CTACCA TGCG TGGTAGCTGTGCATCGCCCACCG TACCTTTGGTTCAAG Rmet_3666 57577 - 57861 + | hypothetical protein Rmet_3667 57882 - 58547 + | 3-oxoacid CoA-transferase, subunit A Rmet_3668 58576 - 59223 + | butyryl-CoA:acetate CoA transferase Rmet_3669 59252 - 60454 + | beta-ketoadipyl CoA thiolase TERM 53 60630 - 60665 + F 100 -12.4 -5.42265 | opp_overlap 60629, overlap 60631 AACGAGGTAGAGCAT CGCGGCCAGGCCGACG GGCT CGCCGGCTTCGCCGCA TTTTTTCTGATTTGA TERM 54 60631 - 60664 + F 95 -15.9 -3.83732 | opp_overlap 60629, overlap 60630 ACGAGGTAGAGCATC GCGGCCAGGCCGACG GGCT CGCCGGCTTCGCCGC ATTTTTTCTGATTTG TERM 55 60972 - 60950 - g 71 -10.5 -3.61398 | GCGGCTCGTCAACAA TGCCGGCGC CACGC GCCCCGGCA CGGCTGACACGGCCA Rmet_3670 60714 - 61445 + | short-chain dehydrogenase/reductase SDR TERM 56 61468 - 61450 - f 77 -8.1 -4.31433 | overlap 61452 CACCCGTATAAGAAA GTGCCCG CCCCC CAGGCAC GGGGCGGAATAGCGG Rmet_3671 61549 - 62553 + | hypothetical protein TERM 57 62613 - 62583 - T 90 -19.8 -3.02144 | opp_overlap 62583 CCAGGTCGCCGAAGA CCGGCCAGCAGG TATCGCG CCTGCTGGCCGG TTTTTTTTTGGTGGG TERM 58 62583 - 62613 + T 100 -20.5 -6.15828 | opp_overlap 62583 CCAGGTCGCCGAAGA CCGGCCAGCAGGT ATCGC GCCTGCTGGCCGG TTTTTTTTTGGTGGG TERM 59 62671 - 62650 - T 100 -17.3 -5.18371 | CTTCAGAAAAGAAAA GCCCGCGAC GTTC GTCGCGGGC TGAATCCCAGGTCCT Rmet_3672 62959 - 62750 - | hypothetical protein TERM 60 62892 - 62873 - G 74 -11.4 -3.66288 | gap 1, opp_overlap 62860 GAGCCGGTAATAGAA CG-GCGCCG TTC CGGCGCGCG TGCGGGTGACAGGCT Rmet_3673 63286 - 63855 + | PadR family transcriptional regulator TERM 61 63852 - 63871 + T 72 -12.2 -3.04144 | opp_overlap 63852 CAGTGGCGTCAAGGA CTGACGAC GGGC GTCGTCAG TCTTCAGGCTACAAA Rmet_3674 64878 - 63889 - | 2-nitropropane dioxygenase, NPD TERM 62 65202 - 65218 + G 73 -13.7 -2.87683 | GCGACACGGTTTTCG CCACGGC ACC GCCGTGG TCTATCGGGCGATGT TERM 63 65424 - 65469 + G 77 -8.9 -4.21607 | gap 1, opp_overlap 65413 65457 CAACCCCGCCAGCCA GGCCGTCAAGTCGCATCTCGCC GAC GGCGAGAA-CGATCCGACCGCC TTTCTGTTACCTGGC Rmet_3675 65059 - 66135 + | phage integrase Rmet_3676 66228 - 67247 + | UDP-galactose 4-epimerase TERM 64 67397 - 67421 + T 100 -15.8 -4.9725 | opp_overlap 67397 67401, overlap 67401 ACACGTGGCAAAAAA GAAACCGGGC ATAGC GCCCGGTTTC TTTTTATCTGCCGAT TERM 65 67421 - 67397 - T 100 -16.5 -5.02476 | opp_overlap 67397 67401, overlap 67401 ACACGTGGCAAAAAA GAAACCGGGCA TAG CGCCCGGTTTC TTTTTATCTGCCGAT TERM 66 67417 - 67401 - T 100 -11.5 -5.04249 | opp_overlap 67397 67401, overlap 67397 GTGGCAAAAAAGAAA CCGGGCA TAG CGCCCGG TTTCTTTTTATCTGC TERM 67 67401 - 67417 + T 100 -10.8 -5.01422 | opp_overlap 67401 67397, overlap 67397 GTGGCAAAAAAGAAA CCGGGC ATAGC GCCCGG TTTCTTTTTATCTGC Rmet_3677 67757 - 67449 - | nucleoid protein H-NS TERM 68 68681 - 68650 - g 78 -7.9 -4.33105 | gap 1, opp_overlap 68668, overlap 68652 GAACGACGATGAAAA GGCGCT-GGCCGGC GAACT GGCGGCCAAGCGGC AGGCGTTCTTCGAGA TERM 69 68998 - 68978 - g 71 -12.6 -3.25823 | CGCCCGGTACAGGAA GCGCTCGA CGTGT TCGAGCGC ATGACGCGCGGCGAC TERM 70 69865 - 69909 + G 72 -13 -3.05596 | gap 3, overlap 69868 CACGCTGGTTTCCGA TG-GCGGCAACGC-GCGCGCC AATGCC GGCGCGCAGCG-TGCCGTGCA TTCGCTGGCGACGTC TERM 71 69868 - 69905 + G 81 -17.1 -2.54896 | overlap 69865 GCTGGTTTCCGATGG CGGCAACGC-GCGCGCC AATGCC GGCGCGCAGCG-TGCCG TGCATTCGCTGGCGA TERM 72 70105 - 70053 - g 77 -11.8 -3.60627 | gap 1 GCATGTCAGCCGAAA GCCGGCCATTGCGCCCGTCGGCGAG CCAG CCGGCCG-CGGCAGCCACGGCCGAC GACGACTGGGCAACC Rmet_3678 68309 - 70126 + | methyl-accepting chemotaxis sensory transducer TERM 73 70184 - 70225 + F 82 -12.3 -3.64822 | CGAGGCATTTGCGAA GTGCCATGATGCGGGGC GCGCGCCA GGCACGCATCATGGCGC TTTCGGTGCCCCAGT TERM 74 70477 - 70531 + G 72 -12.9 -3.06696 | gap 2, opp_overlap 70472, overlap 70477 70505 CCGCCAACGATGGCG CGCGGATGGCAGCCACGTTTGCCGCCA CGC TGGCGGCCAGCCTGGCTG-CGT-CGCA TCTGTTCGGGCCGCC TERM 75 71441 - 71487 + G 91 -17.1 -3.53761 | opp_overlap 71423 GCGCGTGTTCAACTC GGCCGCGGGGGAGCGCGCGCG CCGCA CGCGCGTGATCCGGCGCGACC TTTGGCCCGCCATTC Rmet_3679 70263 - 72245 + | diguanylate cyclase/phosphodiesterase Rmet_3680 72405 - 72788 + | response regulator receiver domain-containing protein Rmet_3681 72876 - 73427 + | CheW protein TERM 76 73438 - 73463 + F 79 -14.7 -2.87132 | gap 1, opp_overlap 73407 CCTGAGCGGCGCGAG CGGCCCGAGCGC TCC GCGC-CGGGTCG TATCTCGCCCCACGC Rmet_3682 73545 - 75203 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Rmet_3683 75242 - 77083 + | methyl-accepting chemotaxis sensory transducer TERM 77 77131 - 77172 + F 81 -8.6 -4.72272 | gap 1, opp_overlap 77123, overlap 77132 AAGGAAGGGTGACGC ACGTCCCGGCGCCAGGC ATCGAGCCA GCCAG-CGCCGGGGCGC TTTTTCGTCCAACGA TERM 78 77132 - 77171 + F 79 -12.1 -3.43042 | gap 1, opp_overlap 77123, overlap 77131 AGGAAGGGTGACGCA CGTCCCGGCGCCAGGC ATCGAGCCA GCCAG-CGCCGGGGCG CTTTTTCGTCCAACG TERM 79 77616 - 77588 - g 80 -14.6 -3.05384 | opp_overlap 77582, overlap 77606 GCCGCCTTCACGGAA GCGCTGGCCG CGCAGATAT CGGCCAGCGC CGTCGATATTCGCAC TERM 80 77908 - 77930 + G 77 -11.3 -3.73914 | overlap 77888 GGCAGCGTGGTTGCG GCGCGTCTT TAGTC AAGGCGCGC TTGTTCGTCAATAGT Rmet_3684 77192 - 77944 + | hypothetical protein Rmet_3685 78343 - 78660 + | transcriptional activator FlhD Rmet_3686 78657 - 79262 + | transcriptional activator FlhC Rmet_3687 79349 - 80248 + | chemotaxis MotA protein motB 80262 - 81239 + | flagellar motor protein MotB TERM 81 82007 - 81976 - g 78 -13 -3.53563 | gap 1 AGATCGCCGTGGAAA CGGTAACGCCAGGTG AGG CACC-GGCGGCACCG GTCGGTGCGCCGACG Rmet_3689 81300 - 83315 + | CheA signal transduction histidine kinases Rmet_3690 83340 - 83834 + | CheW protein TERM 82 84322 - 84280 - g 77 -4.6 -4.66318 | overlap 84281 AGCACGCCAAGAAAA TCGGGCGACCCTACAGCG TCTGGTG CGCCGCGGCGTCGACCGG CGAGGAGCCGTACTC Rmet_3691 83898 - 84809 + | MCP methyltransferase, CheR-type TERM 83 85280 - 85241 - g 93 -17.8 -3.67597 | gap 1, overlap 85225 CTGCGCACGGAAGAA GTGCGCGTGG-CCGCGCAG GAT CTGCGCGGACCGCACGCGC GACGTGTCAGCTACT Rmet_3692 84806 - 85468 + | chemoreceptor glutamine deamidase CheD TERM 84 85967 - 85919 - g 77 -13 -3.30441 | gap 1, overlap 85909 85900 85921 85966 GACGATCGCGGACAA GATCCGCGCCGCATCGCGCGCCC GCGT GCGTGCGCG-TGCGGAGCAGAGC GCTGGCGCGGCGCCC TERM 85 85965 - 85921 - g 78 -14.2 -3.21924 | gap 1, overlap 85909 85900 85919 CGATCGCGGACAAGA TCCGCGCCGCATCGCGCGCCC GCGT GCGTGCGCG-TGCGGAGCAGA GCGCTGGCGCGGCGC TERM 86 85974 - 86007 + G 78 -13.7 -3.21276 | opp_overlap 85966, overlap 85973 GAGCAGAGCGCTGGC GCGGCGCCCGTCGCG CCGA TGCTGCGCGCGCCGC TGTTGTCGACGGAAA Rmet_3693 85536 - 86609 + | chemotaxis-specific methylesterase Rmet_3694 86649 - 87068 + | response regulator receiver domain-containing protein Rmet_3695 87081 - 87716 + | chemotaxis regulator CheZ TERM 87 87704 - 87718 + F 71 -7.8 -4.09519 | overlap 87698 CGATCTGCTGGCGAG CCTCGG CTT CTGAGG TTGTTTGTAGATAGT TERM 88 87774 - 87739 - f 87 -17.6 -2.99545 | gap 1, opp_overlap 87734 TGTAGATAGTAGATA GGCTACCGCTCTCCCGC ATC GCGGGAGAGCGGC-GCT TCAGCGTACCTTCGC TERM 89 88906 - 88867 - g 75 -9.8 -4.0371 | CACGTTCCAGACAAA GCTGATCGGCGATCGCCC GGCC GGGCAGACGCCGACCGAC TCGGTGATCGTGCAA Rmet_3696 87845 - 89203 + | peptidase M20 Rmet_3697 89319 - 90050 + | hypothetical protein TERM 90 90123 - 90107 - f 73 -10.1 -3.59979 | overlap 90117 GCGCTGCATCGTAAA GGCGACA TCA TGCCGCC GGATGCCAGCCGGAC TERM 91 90723 - 90736 + G 71 -9.5 -3.79113 | GCATGTCGCCGATCT CCGGC CTCG GCCGG TTGTTCTCGGCGCAT flhB 90329 - 91471 + | flagellar biosynthesis protein FlhB flhA 91468 - 93555 + | flagellar biosynthesis protein FlhA TERM 92 94635 - 94651 + G 72 -3.6 -4.614 | GCTCGATGTGGTGAT CCGCCA TCGCC TGCCGG TTTTCTATGCTTCCA flhF 93565 - 96042 + | flagellar biosynthesis regulator FlhF Rmet_3701 96046 - 96870 + | flagellar biosynthesis protein FlhG Rmet_3702 96978 - 97694 + | sigma 28 (flagella/sporulation) Rmet_3703 97694 - 98140 + | flagellar FlhE TERM 93 98287 - 98254 - T 100 -15.3 -5.42259 | overlap 98283 GCAGTCGCAAAAAAA GCCCGCTCCCAGCCA GTCA TGACCAGAAGCGGGC AGGTGGAGCCCAGTC Rmet_3704 99417 - 98326 - | porin TERM 94 98512 - 98479 - G 91 -17.5 -3.28712 | gap 1, opp_overlap 98468 98479 98501 CGTGCGCTTGGAGAA GGCGTAGCTG-GCACG TAA CGCGCCCAGCCACGCC TTGTCGGCGCTGTTG TERM 95 98479 - 98512 + g 77 -13.1 -3.31248 | gap 1, opp_overlap 98479, overlap 98468 98501 CGTGCGCTTGGAGAA GGCGTAGCT-GGCACG TAA CGCGCCCAGCCACGCC TTGTCGGCGCTGTTG TERM 96 99394 - 99411 + g 72 -8.3 -4.02742 | GCCGAGCGCGGCCGC CAGCGCC AGGT GGCGCAG TTTCATCTTCTTCTC Rmet_3705 100521 - 99496 - | amidohydrolase 2 Rmet_3706 101666 - 100518 - | methylitaconate delta2-delta3-isomerase TERM 97 101610 - 101592 - G 88 -2.2 -5.24129 | GCTCGCGAGAAAAAA CGGTCCGC GTG ACGTGCCG CCGCGCATCAGCGTG Rmet_3707 101838 - 103058 + | LysR family transcriptional regulator Rmet_3708 103228 - 104553 + | major facilitator transporter TERM 98 104751 - 104706 - g 78 -4 -4.72272 | gap 2, opp_overlap 104685 104709, overlap 104708 GCTCGCTAGGAAAAA GCCCGACGTG-C-TGCTCGTCG TCTA CAACGATCACGTCACGTCGTTC TTCTTCGATCACTAT Rmet_3709 104563 - 105855 + | protocatechuate 4,5-dioxygenase Rmet_3710 105837 - 106376 + | rubredoxin-type Fe(Cys)4 protein Rmet_3711 106666 - 107253 + | GCN5-related N-acetyltransferase Rmet_3712 107764 - 107288 - | putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein TERM 99 108995 - 109021 + G 93 -18.8 -3.79251 | overlap 108996 CGCGGTTTGCCCGAT TCCTGAGGCGAC GAT GTCGCCTCAGGG TTTGGTGGTCAACTG TERM 100 108996 - 109020 + G 100 -20.1 -2.87229 | overlap 108995 GCGGTTTGCCCGATT CCTGAGGCGAC GAT GTCGCCTCAGG GTTTGGTGGTCAACT Rmet_3713 108087 - 109049 + | LysR family transcriptional regulator Rmet_3714 109230 - 109030 - | hypothetical protein Rmet_3715 109602 - 109285 - | putative signal peptide protein TERM 101 109333 - 109354 + g 75 -2.8 -4.83615 | overlap 109335 GTCGAATTTCGCGGC GTGCGCCG CGTCGC CAGCGCCC TTTTTCTGCGGAGTC Rmet_3716 109757 - 110287 + | hypothetical protein TERM 102 110321 - 110350 + T 82 -14.3 -3.14344 | opp_overlap 110299 110322 GCGTATCCCCACGCA AGGACGCCAGCAT CGTC GTGCTGGCGTCCC TTAATGACGCCCCTA TERM 103 110349 - 110322 - T 87 -17.1 -3.06183 | opp_overlap 110321 CGTATCCCCACGCAA GGACGCCAGCA TCGTCG TGCTGGCGTCC CTTAATGACGCCCCT Rmet_3717 111041 - 110388 - | dihydropteridine reductase Rmet_3718 111587 - 111123 - | hypothetical protein Rmet_3719 111721 - 112629 + | LysR family transcriptional regulator Rmet_3720 112713 - 114473 + | sulfate permease TERM 104 114565 - 114539 - T 95 -18 -3.41125 | CGGATACAGGCACAA GCACAGGCGCCG TGG CGGCGCCCGTAC CTGTCAGTCGTCAGT Rmet_3721 115613 - 114576 - | hypothetical protein TERM 105 114828 - 114813 - G 72 -8.2 -3.9712 | opp_overlap 114813, overlap 114824 GGAGCTCATCACAAA GCCCGG GAAA CCGGAC TCTTCCATCGTCGGG TERM 106 116198 - 116238 + G 81 -14.2 -3.53811 | gap 2, opp_overlap 116198 CGAGCAGTCGATGAA GATCC-GGTAC-ATGCCGGT GCG GCCGGCATCGTGCCCGGATC TTTACGCGGAATGGA Rmet_3722 115800 - 116270 + | CMP/dCMP deaminase, zinc-binding Rmet_3723 118157 - 116271 - | methyl-accepting chemotaxis sensory transducer Rmet_3724 118420 - 120030 + | EAL-containing signal transduction protein Rmet_3725 120087 - 121424 + | uracil-xanthine permease TERM 107 121458 - 121485 + T 100 -19.2 -3.80893 | ATCGTGCTTGATCGG CGCCCCGGAGCA GCGA TGCTTCGGGGCG TTTGACTTGTGGGAT Rmet_3726 122097 - 121507 - | hypothetical protein Rmet_3727 122186 - 123385 + | acyl-CoA dehydrogenase-like protein Rmet_3728 123409 - 124554 + | acyl-CoA dehydrogenase-like protein TERM 108 124613 - 124648 + T 100 -20.6 -3.63744 | opp_overlap 124618, overlap 124618 GGCAAAGCATCAAAG AAAAAGCCCCGGAGCA TTCC TGCTCCGGGGCTTTTC TGTTTTCAACCACCA TERM 109 124618 - 124643 + T 100 -20.5 -4.89567 | opp_overlap 124618, overlap 124613 AGCATCAAAGAAAAA GCCCCGGAGCA TTCC TGCTCCGGGGC TTTTCTGTTTTCAAC TERM 110 124643 - 124618 - T 100 -20.5 -5.34309 | opp_overlap 124618 124613 AGCATCAAAGAAAAA GCCCCGGAGCA TTCC TGCTCCGGGGC TTTTCTGTTTTCAAC Rmet_3729 126950 - 124707 - | isocitrate dehydrogenase, NADP-dependent TERM 111 127220 - 127202 - R 70 -10.3 -3.51365 | TTATATCTTATAGAA GAGTCCG ACTGG CGGACTC GGGAATAACACCTCA Rmet_3730 128406 - 127318 - | putative transmembrane protein Rmet_3731 128935 - 128471 - | FlgN Rmet_3732 129323 - 128943 - | anti-sigma-28 factor, FlgM flgA 130239 - 129502 - | flagellar basal body P-ring biosynthesis protein FlgA flgB 130518 - 130922 + | flagellar basal body rod protein FlgB Rmet_3735 130934 - 131341 + | flagellar basal-body rod protein FlgC TERM 112 131431 - 131478 + G 82 -15.4 -3.15861 | opp_overlap 131433 131445 131475 ACTTCGGCCGTGAAC CAGGCGCTGCAGAACGGCAGCG CCAG CGCCGCCGATCTGCAGAACCAG TTCCTGACGATGCTG TERM 113 131476 - 131433 - g 100 -21 -2.70932 | opp_overlap 131431, overlap 131445 131475 TTCGGCCGTGAACCA GGCGCTGCAGAACGGCAGCG CCAG CGCCGCCGATCTGCAGAACC AGTTCCTGACGATGC TERM 114 131464 - 131445 - g 74 -12.8 -3.29144 | opp_overlap 131431, overlap 131433 CCAGGCGCTGCAGAA CGGCAGCG CCAG CGCCGCCG ATCTGCAGAACCAGT flgD 131383 - 132051 + | flagellar basal body rod modification protein TERM 115 132664 - 132616 - g 91 -17.3 -3.18582 | opp_overlap 132612 CACGGTACCGACCAA CGCGTTCGTCAGCACGCCGGGCG CCA CGCCGCCCGTGCTGCCGAACTCG ACCATGTTCAACTAC flgE 132125 - 133372 + | flagellar hook protein FlgE TERM 116 133935 - 133881 - g 74 -10.8 -3.76224 | gap 4, opp_overlap 133883 133884, overlap 133882 GGCCCAGGTAGGAAA GCTGCGCGTCGTCA-CGC-CGCC-GCCC GAA GGGCTGGCGCGCGGTGACGACG-GCTAT TTCCGCCTGCGTCCG TERM 117 133934 - 133882 - g 73 -14.3 -2.8552 | gap 4, opp_overlap 133883 133884, overlap 133881 GCCCAGGTAGGAAAG CTGCGCGTCGTCA-CGC-CGCC-GCCC GAA GGGCTGGCGCGCGGTGACGACG-GCTA TTTCCGCCTGCGTCC TERM 118 133883 - 133934 + G 84 -14 -3.57792 | gap 5, opp_overlap 133882 133881, overlap 133884 CCCAGGTAGGAAAGC T-GCGCGTCGTCA-CGC-CGCC-GCCC GAA GGGCTGGCGCGCGGTGACGACG-GCTA TTTCCGCCTGCGTCC TERM 119 133884 - 133932 + G 100 -19.1 -3.36694 | gap 4, opp_overlap 133882 133881, overlap 133883 CCAGGTAGGAAAGCT GCGCGTCGTCA-CGC-CGCC-GCCC GAA GGGCTGGCGCGCGGTGACGACG-GC TATTTCCGCCTGCGT flgF 133399 - 134142 + | flagellar basal body rod protein FlgF TERM 120 134168 - 134144 - f 72 -11.3 -3.28745 | TCTCCAACAATTGAA GCGCGCGGGCT TGA AGCCAGCGCGG AAAAGCTAAGACAAG flgG 134191 - 134976 + | flagellar basal body rod protein FlgG flgH 134983 - 135696 + | flagellar basal body L-ring protein flgI 135704 - 136888 + | flagellar basal body P-ring protein flgJ 136888 - 137910 + | peptidoglycan hydrolase flgK 138176 - 140071 + | flagellar hook-associated protein FlgK flgL 140127 - 141365 + | flagellar hook-associated protein FlgL TERM 121 141449 - 141493 + T 100 -13.7 -5.00616 | opp_overlap 141455, overlap 141452 141455 TGTTGAGCACATCAA GAATAAGGCTGCAACCCTTGT CCA GCAAGGCTTGCAGCCTTCTTG TTTTTTCCACGAGAC TERM 122 141452 - 141490 + T 100 -15.4 -4.61482 | opp_overlap 141455, overlap 141449 141455 TGAGCACATCAAGAA TAAGGCTGCAACCCTTGT CCA GCAAGGCTTGCAGCCTTC TTGTTTTTTCCACGA TERM 123 141487 - 141455 - T 100 -16.4 -4.0156 | opp_overlap 141452 141449 141455 GCACATCAAGAATAA GGCTGCAACCCTTG TCCAG CAAGGCTTGCAGCC TTCTTGTTTTTTCCA TERM 124 141455 - 141487 + T 100 -17.1 -4.40692 | opp_overlap 141455, overlap 141452 141449 GCACATCAAGAATAA GGCTGCAACCCTTGT CCA GCAAGGCTTGCAGCC TTCTTGTTTTTTCCA Rmet_3745 142906 - 141728 - | diguanylate cyclase Rmet_3746 143549 - 143187 - | hypothetical protein Rmet_3747 144885 - 143806 - | hypothetical protein TERM 125 145530 - 145547 + G 74 -11.3 -3.68351 | GCGCTCAATGCCAAG TGTCCGC GGAA GCGGACA TTTCCGTGATACCAC Rmet_3748 145207 - 145566 + | hypothetical protein TERM 126 145769 - 145755 - g 70 -2.1 -4.70583 | gap 1, opp_overlap 145759, overlap 145759 CCCAGGAAGAGAAAA CGA-CG CTCG CGCTCG ACCTGTTGGGCAAGA Rmet_3749 145586 - 146692 + | hypothetical protein TERM 127 146696 - 146724 + F 74 -11.6 -3.43338 | overlap 146697 GTTCGTTCCTGAATT GCGTGCGCCGCG ATTGG CGCGGCACACGA TTCGTTCATCTCAAT TERM 128 146697 - 146723 + F 76 -15.1 -2.65521 | overlap 146696 TTCGTTCCTGAATTG CGTGCGCCGCG ATTGG CGCGGCACACG ATTCGTTCATCTCAA Rmet_3750 146751 - 148376 + | hypothetical protein Rmet_3751 148373 - 148654 + | hypothetical protein TERM 129 149232 - 149218 - f 72 -12.8 -3.04322 | overlap 149208 CGTAACTGGGCAACA GCGGCG CCA CGCCGC ATGGAGCAGTCGTGA Rmet_3752 149244 - 149546 + | hypothetical protein TERM 130 149767 - 149809 + F 85 -17.9 -2.60079 | gap 1, opp_overlap 149773, overlap 149765 TCGCCAAGAGGAAGA CGTA-AATCACTGTGCCGCG GACA CGCGGCACAGTGATCATGCG TAACTTGTAACGTAC TERM 131 149802 - 149773 - f 100 -22.3 -3.78233 | opp_overlap 149767 149765 AGAGGAAGACGTAAA TCACTGTGCCGCG GACA CGCGGCACAGTGA TCATGCGTAACTTGT Rmet_3754 149882 - 150199 + | hypothetical protein Rmet_3755 150269 - 150520 + | hypothetical protein Rmet_3756 151227 - 150604 - | endoribonuclease L-PSP TERM 132 150724 - 150741 + g 72 -11.3 -3.44622 | GTATCGGTCCTTGAT CTCACGG AACG CCGTGAG TTGCTTGTCGACATC Rmet_3757 151737 - 151582 - | acyl-CoA dehydrogenase-like protein Rmet_3758 151827 - 152174 + | hypothetical protein Rmet_3759 152188 - 152577 + | hypothetical protein TERM 133 152818 - 152833 + G 71 -10.4 -3.66139 | opp_overlap 152802 CCCGGCCCTGGCCGA GGCGGA CCCG TCCGCC TTTGGCATCTGTGTC Rmet_3760 152666 - 153664 + | glutaminase Rmet_3762 154498 - 154115 - | hypothetical protein TERM 134 154913 - 154891 - R 73 -9.9 -3.67296 | gap 1, overlap 154881 GACCACGGAGCGAAA GCGT-CGCGT CCGT ACGCGCACGC CACTGCAGAAACACG Rmet_3763 155437 - 155099 - | hypothetical protein Rmet_3764 156131 - 155427 - | hypothetical protein Rmet_3765 157210 - 156146 - | AraC family transcriptional regulator Rmet_3766 157950 - 157294 - | HhH-GPD Rmet_3767 158504 - 157953 - | methylated-DNA--protein-cysteine methyltransferase Rmet_3768 158744 - 158553 - | hypothetical protein Rmet_3769 159413 - 158829 - | DNA-N1-methyladenine dioxygenase Rmet_3770 159585 - 159884 + | transposase IS3/IS911 Rmet_3771 159881 - 160774 + | integrase catalytic subunit Rmet_3772 160848 - 161129 + | hypothetical protein Rmet_3773 161126 - 162433 + | hypothetical protein TERM 135 163359 - 163378 + G 79 -6.3 -4.66537 | GCCTATGGAGATACC CGGCCGG CGCCGT CCGCCCG TTTTCTATTGCCCCA Rmet_3774 162430 - 164145 + | hypothetical protein TERM 136 164189 - 164210 + T 86 -13.7 -3.50393 | opp_overlap 164189 CGGCGCAGCTGGAAA GGGCCGTTC ATGG GAGCGGCCC TTCTGTGGCGTAAGC TERM 137 164210 - 164189 - T 77 -11.5 -3.57144 | opp_overlap 164189 CGGCGCAGCTGGAAA GGGCCGTTC ATGG GAGCGGCCC TTCTGTGGCGTAAGC Rmet_3775 164702 - 164427 - | hypothetical protein Rmet_3776 164820 - 166007 + | hypothetical protein Rmet_3777 166051 - 167754 + | AMP-dependent synthetase and ligase Rmet_3778 167768 - 168646 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 138 169005 - 168973 - g 72 -8.4 -4.11371 | opp_overlap 168966, overlap 168975 168999 169002 CAACAGCGCGCAAAA GAGCTTGGCGTACG GGTGA CGTACAACAAGCGC ATTGCCGATTTCGAT Rmet_3779 168643 - 169803 + | monooxygenase, FAD-binding Rmet_3780 169800 - 170249 + | thioesterase-like protein Rmet_3781 170270 - 171028 + | Asp/Glu racemase TERM 139 171073 - 171048 - f 73 -10.4 -3.60151 | gap 1, overlap 171065 CTGCGCAAACCATAA GGCGGCCGCCC ACGGA AGGCG-CCGCC ACGACCACGGAGACC Rmet_3782 171094 - 172341 + | major facilitator transporter Rmet_3783 172355 - 173233 + | TetR family transcriptional regulator Rmet_3784 173389 - 174345 + | hypothetical protein TERM 140 174375 - 174390 + F 77 -3.2 -5.00616 | TGACCTTCCCTTGGA GAACAC ATGC GTGATC TTTTTTCCCGGGCAG Rmet_3785 174381 - 175562 + | beta-lactamase-like protein Rmet_3786 175703 - 176878 + | porin Rmet_3787 177251 - 177682 + | hypothetical protein TERM 141 177866 - 177883 + F 100 -14.1 -5.4505 | GAGTCGAGCCATGGA GCCGCCC AATT GGGCGGC TTTTTTGTTCGCCGG TERM 142 179220 - 179240 + G 75 -13.9 -3.01416 | CATACCGGCGACATG GCGCGCCGC GAT GCGGCGGGC TATCTCTACATCGTC Rmet_3788 178023 - 179594 + | acyl-CoA synthetase Rmet_3789 179660 - 180640 + | hypothetical protein TERM 143 180658 - 180716 + T 100 -23.4 -3.5764 | gap 3, overlap 180640 180659 GGCGAGCGTCGACTC GGCGCCTTCCCTGCGTGGGGC-GAACGGG GGTA TCCGTTCAGCCCC-CGCAG-GAAGGCGCG TTTGGCCGTGGCCTT TERM 144 180659 - 180715 + T 100 -26.9 -2.74263 | gap 3, overlap 180640 180658 GCGAGCGTCGACTCG GCGCCTTCCCTGCGTGGGGC-GAACGGG GGTA TCCGTTCAGCCCC-CGCAG-GAAGGCGC GTTTGGCCGTGGCCT Rmet_3790 182594 - 180804 - | acyl-CoA dehydrogenase-like protein Rmet_3791 183878 - 182655 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_3792 184874 - 183894 - | hypothetical protein TERM 145 184752 - 184721 - G 74 -10.9 -3.61398 | gap 1 GCTTCTGGCCAATAA CGCGAGCGACGATG TCCGT CAT-GCCGCCCGCG GCATATGGAACCACG Rmet_3793 185022 - 185936 + | LysR family transcriptional regulator TERM 146 185951 - 185963 + T 73 -10.5 -3.57462 | ACGGATACCTGCTCA GCCGC GGG GCGGC TTTGCCCGTCGGGTG Rmet_3794 186550 - 185948 - | TetR family transcriptional regulator TERM 147 186335 - 186349 + g 85 -7.8 -4.62471 | overlap 186315 GTCGGGAGCGCGCCT GGCTGC CGC GTAGCC TTTTTCCAGATTGGC Rmet_3795 187796 - 186741 - | lipase chaperone Rmet_3796 188916 - 187783 - | alpha/beta hydrolase fold Rmet_3797 189231 - 190193 + | hypothetical protein TERM 148 190331 - 190367 + F 87 -17.2 -3.0814 | CTAGACTTCGACATG TGACCCGACCGCGCCC TGATC GGGCCCGGTCGGGCCG TGTTCCACTCTCCAT Rmet_3798 190398 - 191930 + | AMP-dependent synthetase and ligase Rmet_3799 192867 - 191965 - | LysR family transcriptional regulator TERM 149 193639 - 193655 + G 74 -15.1 -2.53263 | CTGGCTCGTGGTCTG GCCGGCG CTT CGCCGGC TGCATTCGCCATGGC Rmet_3800 192976 - 193839 + | enoyl-CoA hydratase / short chain enoyl-CoA hydratase TERM 150 193858 - 193876 + T 100 -17.4 -3.60296 | CGGGGCTGATGGCTG CCGGGGGC ATC GCCCCCGG TTTCACGTCGCCCTC Rmet_3801 194895 - 193903 - | hypothetical protein Rmet_3802 196543 - 194906 - | AMP-dependent synthetase and ligase TERM 151 197232 - 197212 - g 79 -11.1 -3.84825 | CTGATCGACATGAAA TCGCCCGGT GTG ACCGTGCGA CCGATCAAGACGCTC Rmet_3803 196633 - 197826 + | acyl-CoA dehydrogenase-like protein Rmet_3804 197844 - 198953 + | acyl-CoA dehydrogenase-like protein TERM 152 199086 - 199074 - g 71 -10.5 -3.57263 | AGCTTCACGCGGAAA GCGCC AAG GGCGC GCTCGAGGATGCGGG Rmet_3805 198980 - 200146 + | acetyl-CoA acetyltransferase Rmet_3806 200161 - 200559 + | hypothetical protein TERM 153 200674 - 200707 + G 81 -11.2 -4.03234 | gap 2, opp_overlap 200683 GCTGAGCCTGGGCCT GGGCAATGATCCGATG AATG CATCGG--CATTGCCC TTTGTCTACGAAGGC Rmet_3807 200573 - 201466 + | MaoC-like dehydratase Rmet_3808 201484 - 202776 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 154 202789 - 202821 + T 90 -19.3 -3.10715 | opp_overlap 202794, overlap 202794 TAAAACAAGCCTTAA AAAAACCGGCAGTGC AAG GCACTGCCGGTTTTC TTGCGTGGTGCTAGA TERM 155 202816 - 202794 - T 100 -19.2 -5.43866 | opp_overlap 202789 202794 CAAGCCTTAAAAAAA CCGGCAGTGC AAG GCACTGCCGG TTTTCTTGCGTGGTG TERM 156 202794 - 202816 + T 100 -19.2 -4.69053 | opp_overlap 202794, overlap 202789 CAAGCCTTAAAAAAA CCGGCAGTGC AAG GCACTGCCGG TTTTCTTGCGTGGTG Rmet_3809 204022 - 202832 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_3810 205247 - 204129 - | LysR family transcriptional regulator Rmet_3811 205246 - 206229 + | hypothetical protein Rmet_3812 206261 - 206731 + | MaoC-like dehydratase Rmet_3813 206721 - 207698 + | hypothetical protein Rmet_3814 208720 - 208109 - | hypothetical protein Rmet_3815 210339 - 208717 - | peptidoglycan binding domain-containing protein Rmet_3816 211149 - 210454 - | TetR family transcriptional regulator TERM 157 211573 - 211603 + G 73 -11.8 -3.35679 | overlap 211575 GTTCGCCGATCCGCG TCCCGGCGCATGGG CTG CCTATGCGGCCGGA TTCTCGATGCACGGG TERM 158 211575 - 211602 + G 70 -14.2 -2.61264 | gap 1, overlap 211573 TCGCCGATCCGCGTC CCGG-CGCATGGG CTG CCTATGCGGCCGG ATTCTCGATGCACGG Rmet_3817 211247 - 212893 + | acyl-CoA dehydrogenase-like protein Rmet_3818 213032 - 214537 + | AMP-dependent synthetase and ligase TERM 159 214778 - 214804 + G 88 -15.8 -3.39862 | opp_overlap 214795 GAGTTCCTGAACCCG GGTGGCTCGGTC AAG GACCGCGCCGCC TTGTACATCATTGCT TERM 160 215216 - 215230 + G 86 -12.8 -3.85698 | ACAGGCGGGACGCTC GCGGGC GTT GCCCGC TTTCTCAAGGCGCAG Rmet_3819 214661 - 215635 + | cysteine synthase A Rmet_3820 215755 - 216906 + | putative cytochrome p450 oxidoreductase Rmet_3821 216922 - 217278 + | antibiotic biosynthesis monooxygenase Rmet_3822 217297 - 218052 + | hypothetical protein TERM 161 218228 - 218206 - g 78 -16.2 -2.71263 | AACGTTGGGCAAGCA GGCGGCGCGC AGC GCGCGCCGGC TGCAGCGCACCGTGG TERM 162 218481 - 218510 + G 76 -13.6 -3.13522 | gap 1, overlap 218479 TTGTGCCGCCCGGTG TCAGC-GCGGCGC GGCCA GCGCCGCTGCTGG TGTTGCTGCACGGCT Rmet_3823 218156 - 219280 + | esterase, PHB depolymerase Rmet_3824 219658 - 219350 - | ferredoxin TERM 163 219406 - 219425 + g 72 -6.4 -4.2558 | overlap 219409 GACACGCCACGCAGG GCAGGATG TAGC CATCCTCC TTTTCGTCGAGGCTC Rmet_3825 220392 - 219655 - | hypothetical protein TERM 164 222214 - 222158 - g 74 -12.9 -3.25475 | opp_overlap 222158, overlap 222171 GCGAAGACAGCAACA CGCACGTCAACAACTTCCTGTGGGCGT ACA ACGTCGACACGAAGCAGCTGTCGCGCG TGCTGTCGTGCCCGG Rmet_3826 220465 - 222453 + | hypothetical protein Rmet_3827 222534 - 223148 + | hypothetical protein Rmet_3828 223145 - 223819 + | HD superfamily hydrolase Rmet_3829 223991 - 224548 + | hypothetical protein Rmet_3830 224545 - 225255 + | hypothetical protein Rmet_3831 226212 - 225379 - | hypothetical protein Rmet_3832 227261 - 226293 - | hypothetical protein TERM 165 227047 - 227064 + g 72 -8.3 -4.08767 | TGGGTGCCAATGTTG CCGCCAG CGCC CGGGCGG TTTTCCACCACTACC Rmet_3833 228384 - 227446 - | LysR family transcriptional regulator Rmet_3834 228527 - 229699 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_3835 229712 - 230542 + | HpcH/HpaI aldolase Rmet_3836 230873 - 232210 + | outer membrane efflux protein TERM 166 232753 - 232721 - g 77 -13.4 -3.31144 | gap 1, overlap 232697 232694 232695 232722 GGCGCAGGCGGACAA CGCGCGCGCCGC-GG CTGA CCAGCAGCGCACGCA GGCAGCGCTGCGCAT TERM 167 232752 - 232722 - g 74 -14.7 -2.58544 | gap 1, overlap 232697 232694 232695 232721 GCGCAGGCGGACAAC GCGCGCGCCGC-GG CTGA CCAGCAGCGCACGC AGGCAGCGCTGCGCA Rmet_3837 232194 - 233411 + | secretion protein HlyD TERM 168 233501 - 233513 + F 70 -10.5 -3.53811 | TCATCTTCGTCGCGG GCGGC CTG GCCGC TTTCAAGAACCTGCC TERM 169 236571 - 236588 + F 100 -14.1 -5.60993 | opp_overlap 236571 GGTACGTAGAAGAAA CCGGGGC TCTG GCCCCGG TTTTTTTATGAACCA TERM 170 236588 - 236571 - f 100 -14.1 -4.33417 | opp_overlap 236571 GGTACGTAGAAGAAA CCGGGGC TCTG GCCCCGG TTTTTTTATGAACCA TERM 171 236785 - 236765 - f 70 -3.2 -4.61147 | GAAGAGGAGACAAAA CCCATGGA GTTGA TCCTTGAG CGGCTTTCGGAGTCC Rmet_3840 236768 - 237784 + | diguanylate cyclase Rmet_3841 238081 - 239895 + | tannase and feruloyl esterase Rmet_3842 240446 - 239916 - | hypothetical protein Rmet_3843 240562 - 241065 + | alkylhydroperoxidase AhpD core TERM 172 241210 - 241188 - g 85 -16.4 -3.14344 | GACGTGGTGCAGGAA GCGTTCATCC GTT GGATGAACGC CGAGCGCGCCGAGGT TERM 173 241510 - 241546 + G 89 -13 -4.13767 | gap 1 GCCGGCAGCTTGCGG CGCGGGCGCG-TGCC AATGTGAG GGAATCGCGCCCGCG TTTTCAGGTCGAGAA Rmet_3844 241065 - 241925 + | RNA polymerase sigma factor SigJ TERM 174 242081 - 242097 + G 86 -15.1 -3.53444 | opp_overlap 242063 GCGTGCTTCCTCCGG CGCGGCG AAC CGCCGCG TTTCGCCGGCCGTCC Rmet_3845 242012 - 242350 + | hypothetical protein Rmet_3846 243138 - 242320 - | methyltransferase type 11 TERM 175 242451 - 242465 + g 72 -12.8 -3.05384 | CGAATGCCTCCAGTT CGCCGC GTA GCGGCG TTCCCTGGCAGAAGG Rmet_3847 243447 - 243208 - | hypothetical protein Rmet_3848 243653 - 244138 + | 3-demethylubiquinone-9 3-methyltransferase Rmet_3849 245616 - 244147 - | hypothetical protein Rmet_3850 246494 - 245613 - | putative thiol-disulphide oxidoreductase DCC Rmet_3851 246986 - 246543 - | integral membrane protein-like protein Rmet_3852 248275 - 246983 - | NAD-dependent epimerase/dehydratase TERM 176 248367 - 248346 - R 100 -10.2 -5.03145 | opp_overlap 248350 248362, overlap 248350 TAATCGGGTAAAAAA GAAACGGG TCGATG CCCGTTTC CCATGGAAGCCTTAG TERM 177 248363 - 248350 - R 83 -5.2 -5.04249 | opp_overlap 248350 248362, overlap 248346 CGGGTAAAAAAGAAA CGGG TCGATG CCCG TTTCCCATGGAAGCC Rmet_3853 248924 - 248379 - | transcriptional regulators-like protein TERM 178 250138 - 250162 + G 100 -21.5 -3.57792 | CATTCTTCCGCGCCA CCCTCGCGCTG GCG CAGCGCGAGGG TTTGACCGTGCGTGC Rmet_3854 248982 - 250460 + | putative nitrilotriacetate monooxygenase component A Rmet_3855 250580 - 251401 + | NLPA lipoprotein Rmet_3856 251417 - 252241 + | ABC transporter related Rmet_3857 252225 - 252878 + | binding-protein-dependent transport systems inner membrane component TERM 179 252921 - 252886 - T 87 -17.6 -3.10164 | opp_overlap 252892, overlap 252907 GCAGGTAGCAGGTAA CGCGAAGCCCCCACGT GAAA ACGTGGGGGCTTCCCT TCGCGATCGGAAAAG TERM 180 252892 - 252915 + T 90 -18.2 -3.17723 | opp_overlap 252886 252907 AGCAGGTAACGCGAA GCCCCCACGT GAAA ACGTGGGGGC TTCCCTTCGCGATCG Rmet_3858 254293 - 252938 - | Acyl-CoA dehydrogenase Rmet_3859 255396 - 254335 - | tRNA 2-selenouridine synthase Rmet_3860 256466 - 255393 - | selenophosphate synthase Rmet_3861 258239 - 256575 - | rhomboid-like protein Rmet_3862 259073 - 258423 - | lysine exporter protein LysE/YggA Rmet_3863 259148 - 260044 + | chromosome replication initiation inhibitor protein Rmet_3864 260656 - 260198 - | hypothetical protein Rmet_3865 261842 - 260670 - | chromate transporter TERM 181 260994 - 260958 - G 81 -12.3 -3.90318 | overlap 260959 GTAGCACGGTAGAAA GGTGCCTGC-CGCCGCC ACGCA GGCGCCGGGCAGGC-CC GCCACCAGATAGCCG Rmet_3866 262869 - 261862 - | putative chromate resistance signal peptide protein TERM 182 262937 - 262950 + r 77 -3.1 -4.9792 | gap 1, overlap 262935 CAGCCCGGTTCGAGT GT-CGC TAC GCGTAC TTTTTATGTGCGGTC Rmet_3867 263907 - 262969 - | AraC family transcriptional regulator Rmet_3868 263994 - 265415 + | cytochrome P450 Rmet_3869 266572 - 265493 - | NADH:flavin oxidoreductase/NADH oxidase TERM 183 267283 - 267265 - g 86 -13.1 -3.88498 | overlap 267277 CCCGGATATATCAAA CGCGCGG GAGAA CCGCGCG CTCCCGCCGATCTGA Rmet_3870 266746 - 267615 + | LysR family transcriptional regulator Rmet_3871 268198 - 267767 - | putative signal peptide protein Rmet_3872 269324 - 268338 - | hypothetical protein TERM 184 269463 - 269519 + r 90 -15.2 -3.4489 | opp_overlap 269472 269473, overlap 269472 269473 CGGCAACCGAGATCC CCCACAAAAGCAAACCGCCGCGACGA TGTGC TCGCGGCGGCGGTTTGGTTTTATCGG TTCGTTCTAGCGGTT TERM 185 269510 - 269472 - R 100 -15.3 -4.38154 | opp_overlap 269463 269472 269473, overlap 269473 AGATCCCCCACAAAA GCAAACCGCCGCGACGA TGTGC TCGCGGCGGCGGTTTGG TTTTATCGGTTCGTT TERM 186 269472 - 269510 + r 100 -13.1 -4.48823 | opp_overlap 269472 269473, overlap 269463 269473 AGATCCCCCACAAAA GCAAACCGCCGCGACGA TGTGC TCGCGGCGGCGGTTTGG TTTTATCGGTTCGTT TERM 187 269473 - 269509 + r 93 -16.6 -3.28209 | opp_overlap 269472 269473, overlap 269472 269463 GATCCCCCACAAAAG CAAACCGCCGCGACGA TGTGC TCGCGGCGGCGGTTTG GTTTTATCGGTTCGT TERM 188 269509 - 269473 - R 91 -18.8 -3.2241 | opp_overlap 269473 269472 269463, overlap 269472 GATCCCCCACAAAAG CAAACCGCCGCGACGA TGTGC TCGCGGCGGCGGTTTG GTTTTATCGGTTCGT Rmet_3873 270121 - 269603 - | MarR family transcriptional regulator TERM 189 270305 - 270250 - R 100 -27 -3.85698 | gap 1, opp_overlap 270251 270252, overlap 270251 CGCCCGCCTCACAAA CGTTACGCGCGCCGGCCACGCGCCC GACATCG GGGCGCGTCACCGGCGCGCGCAA-G TTGTGTCATCCGGCC TERM 190 270251 - 270305 + r 100 -22.8 -3.54475 | opp_overlap 270250 270251, overlap 270252 GCCCGCCTCACAAAC GTTACGCGCGCCGGCCACGCGCCC GACATCG GGGCGCGTCACCGGCGCGCGCAAG TTGTGTCATCCGGCC TERM 191 270305 - 270251 - R 100 -27.2 -2.91276 | opp_overlap 270251 270252, overlap 270250 GCCCGCCTCACAAAC GTTACGCGCGCCGGCCACGCGCCC GACATCG GGGCGCGTCACCGGCGCGCGCAAG TTGTGTCATCCGGCC TERM 192 270252 - 270304 + r 100 -26.3 -2.72471 | opp_overlap 270250 270251, overlap 270251 CCCGCCTCACAAACG TTACGCGCGCCGGCCACGCGCCC GACATCG GGGCGCGTCACCGGCGCGCGCAA GTTGTGTCATCCGGC TERM 193 270320 - 270341 + r 73 -10.1 -3.6502 | opp_overlap 270335 GTTGTGTCATCCGGC CGCCGCG CATCAAGA CGCGGCG TTTCCGTGCGGAATC Rmet_3874 271125 - 270355 - | short chain dehydrogenase Rmet_3875 271238 - 272161 + | LysR family transcriptional regulator Rmet_3876 272200 - 275121 + | metal dependent phosphohydrolase Rmet_3877 275952 - 275146 - | hypothetical protein TERM 194 275896 - 275843 - G 75 -3.8 -4.65916 | gap 3, overlap 275880 TGCACCGCAAGAAAA CCGCCCGCGTTGGCCGCGCCTGCCACG AAA CACAACACGCGCG-CCAG-GCGG-CGA TTGGAGACCGGGTTA Rmet_3878 276981 - 276058 - | hypothetical protein TERM 195 276798 - 276786 - G 79 -6.9 -4.54821 | overlap 276787 AGGCGAACGAGAAAA CCGGC GCG GCCAG CGACAGCGGCAGCAG Rmet_3879 277233 - 278096 + | hypothetical protein TERM 196 278086 - 278132 + F 70 -10.1 -3.51976 | gap 1, overlap 278051 278082 278087 TCTACGTGCCCGCGC ACTGGGTCTGACTTGCACCGGT GCGC ACCGGTGCGCGCCAG-TCCAGA TTGATTTCCCAACTT TERM 197 278087 - 278131 + F 73 -13.6 -2.70704 | gap 1, overlap 278051 278086 278082 CTACGTGCCCGCGCA CTGGGTCTGACTTGCACCGGT GCGC ACCGGTGCGCGCCAG-TCCAG ATTGATTTCCCAACT Rmet_3880 278177 - 278506 + | hypothetical protein TERM 198 278912 - 278896 - g 71 -12.3 -3.28712 | opp_overlap 278905 GCTGCGCCGCCAGAA GATCGCC GCC GGCGATC CCACCGTGGCTTCCC Rmet_3881 278525 - 279238 + | two component transcriptional regulator Rmet_3882 279238 - 280551 + | periplasmic sensor signal transduction histidine kinase Rmet_3883 280675 - 281430 + | hypothetical protein TERM 199 281810 - 281828 + G 90 -16 -3.59979 | GCTGTCGCTGACGCG CGGCGTGG CCA CCACGCCG TTTGAGATCAGCAAG Rmet_3884 281562 - 282095 + | MarR family transcriptional regulator Rmet_3885 282897 - 282160 - | Asp/Glu racemase Rmet_3886 284322 - 282904 - | dihydropyrimidinase Rmet_3887 285076 - 284348 - | Asp/Glu racemase TERM 200 285104 - 285126 + r 89 -18.4 -3.08197 | opp_overlap 285103 285102 TCAGGAGTTCAAACG GGCGCCGTCC GCA GGGCGGCGCC TCTGTGTGTGTGGGA Rmet_3888 286473 - 285172 - | major facilitator transporter Rmet_3889 286661 - 287383 + | GntR family transcriptional regulator Rmet_3890 287564 - 288334 + | extracellular solute-binding protein TERM 201 288363 - 288382 + T 100 -16.4 -4.8622 | overlap 288358 TGCAGTACTACCCCG GGGCCGGC GTTT GCCGGCCC TTTTTCATTGGGCGC Rmet_3891 288845 - 288387 - | endoribonuclease L-PSP TERM 202 288765 - 288750 - G 70 -5.4 -4.41348 | gap 1, overlap 288752 TTGTCCGGAAACAAA GAGCAGG TCG CCTGC-C TGGCTGACGGCGGTG TERM 203 288764 - 288752 - G 71 -9.1 -3.81557 | overlap 288750 GTCCGGAAACAAAGA GCAGG TCG CCTGC CTGGCTGACGGCGGT Rmet_3892 289703 - 288969 - | short-chain dehydrogenase/reductase SDR TERM 204 289205 - 289227 + g 72 -12.7 -3.05384 | overlap 289200 CCAGCGCCAGGGCTC GGGTGGCCT GATTG AGGCCGCCC TTGAGTGCCACGGCC TERM 205 289952 - 289932 - g 75 -13.9 -3.01712 | CCGCCGCTGCCAACA CCGCCGGGG TCA CGCCGGCGG CCGTAAGCCGCTCGA Rmet_3893 289841 - 290794 + | LysR family transcriptional regulator Rmet_3894 291095 - 292120 + | hypothetical protein TERM 206 292159 - 292174 + F 75 -7.6 -4.26903 | TGGTAAACCCTAGTA GTCTAG CTAG CTAGAC TTTTAATAGAGTCCG TERM 207 292202 - 292224 + F 100 -17.7 -3.83026 | opp_overlap 292185 CCGATATCGACTTGG CGCGCCGGC TGAAT GCCGGCGCG TTTCGTATGCCGGAC Rmet_3895 292231 - 292980 + | GntR family transcriptional regulator Rmet_3896 293026 - 294567 + | hypothetical protein Rmet_3897 295494 - 294634 - | hypothetical protein Rmet_3898 296900 - 295521 - | MmgE/PrpD TERM 208 295571 - 295604 + g 88 -17.5 -3.05596 | gap 1 CTTCGCGGTCGAGCT GCC-AGACGCGCGCGA TGA TCGCGCGCATCTCGGC TTCGGTCGCGCCGTG TERM 209 295745 - 295776 + g 88 -15.8 -3.30443 | TGGTGCGCACCGTCA CGCGGCCGATCCAC TGGC GCGGATAGGCCGCG TTGATCTCCTCGTCG Rmet_3899 298078 - 296909 - | acyl-CoA dehydrogenase-like protein TERM 210 298215 - 298234 + G 84 -7 -4.7373 | overlap 298217 GCGCGGACTGGCGTG GATGCGGG TTAT CCCGCGAC TTTTTCATGCCCTCG Rmet_3900 298190 - 299386 + | hypothetical protein Rmet_3901 300311 - 299409 - | LysR family transcriptional regulator TERM 211 300319 - 300335 + Gr 74 -5 -4.56607 | overlap 300311 300321 TAGTGCATGGCTTCG GCGGGC ACGAA GCCCAC TTTTGTGATTCATGA TERM 212 300419 - 300400 - gR 88 -9.2 -4.63486 | AGCTCTGCAATAAAA CGGGCAGG CTTC CCTGTCCG TGCAGACAGCAAGCC TERM 213 300756 - 300771 + Gr 77 -4.6 -4.59773 | opp_overlap 300747, overlap 300758 CAACAACGCCGGCAA CCTGCG CGAT CGCATG TTTTTCAAGATGAAC Rmet_3902 300310 - 301362 + | short-chain dehydrogenase/reductase SDR TERM 214 301465 - 301486 + Tr 74 -11.6 -3.43264 | opp_overlap 301465 CGACGCGTCCATACA TGCGTGCC CGATGT GGCACGCA TTCTGCTCACTCCTT Rmet_3903 302089 - 301643 - | hypothetical protein TERM 215 303878 - 303854 - g 70 -2.7 -4.63542 | GAGAAGGTGGAAAAA CCGGCGGGT ATCTCGA ACCCGAAGG ACTTCCGTAACGAGA TERM 216 304097 - 304072 - g 70 -4.7 -4.37527 | GGACAAGCACGAAAA CTTCATCAACC GCAT GGTCGAGAAAG GATACACACCCAAGC Rmet_3904 302240 - 304162 + | putative serine protein kinase, PrkA Rmet_3905 304259 - 305530 + | hypothetical protein TERM 217 306272 - 306285 + G 70 -8.1 -3.95584 | opp_overlap 306234 306237 306256 CTTCCCGCCGGAGCC GCAGG AGAA CCTGC TTTACTTCATCGAGA Rmet_3906 305568 - 307106 + | hypothetical protein TERM 218 307143 - 307116 - T 95 -14.9 -4.00532 | gap 1, overlap 307117 GCCTGAAAGACGAAA GCGCCCGGAGGC TTAGT GCCTCCGG-CGC GTATCGCGGGGCCGG TERM 219 307144 - 307117 - T 80 -14.9 -2.99837 | gap 1, overlap 307116 CCTGAAAGACGAAAG CGC-CCGGAGGC TTAGT GCCTCCGGCGCG TATCGCGGGGCCGGG Rmet_3907 308306 - 307128 - | LuxR family transcriptional regulator Rmet_3908 310996 - 308681 - | MscS mechanosensitive ion channel TERM 220 311096 - 311119 + H 89 -6.6 -5.07486 | overlap 311091 311097 TGTGCGAGTGGGGTG TCGGGCGC ATCGCGTG GCGCCCGC TTTTTATTCAAAATA TERM 221 311097 - 311118 + H 73 -10.1 -3.63768 | overlap 311091 311096 GTGCGAGTGGGGTGT CGGGCGC ATCGCGTG GCGCCCG CTTTTTATTCAAAAT Rmet_3909 311279 - 311599 + | hypothetical protein TERM 222 311645 - 311623 - f 88 -13.5 -3.61517 | opp_overlap 311623 ACGCGTTCCGAACAA GGCGTTACG TAACC CGTAACGCC TTTTTCGTTGGAACA TERM 223 311623 - 311645 + F 100 -13.5 -4.8622 | opp_overlap 311623 ACGCGTTCCGAACAA GGCGTTACG TAACC CGTAACGCC TTTTTCGTTGGAACA Rmet_3910 311806 - 312156 + | hypothetical protein Rmet_3911 312196 - 312822 + | lysine exporter protein LysE/YggA TERM 224 312827 - 312846 + T 72 -12.8 -3.01791 | opp_overlap 312827 CTCAGCGGTAAGGGA TCGGCCCC GTGC GGGGCCGG TGTTCACGCGAAGGT Rmet_3912 313524 - 312850 - | phosphoglycerate mutase Rmet_3913 314709 - 313711 - | hypothetical protein Rmet_3914 315528 - 314824 - | TetR family transcriptional regulator TERM 225 316094 - 316078 - g 74 -15.1 -2.56095 | overlap 316074 CGCACATGGAAGGCA CGCCGGC GCG GCCGGCG ATTGGCGCGGTGCGG Rmet_3915 315660 - 316472 + | IclR family transcriptional regulator TERM 226 316677 - 316627 - g 85 -12.1 -4.13872 | gap 4, opp_overlap 316627, overlap 316628 ACGCAACCAGAGAAA GTCGG-CGGCAT-GCCGA-TTCGCC TGTTG GGCGAACTCGGCTACGCCGGCCG-C GTGTTCCCGGTGAAC TERM 227 317886 - 317865 - g 72 -7.2 -4.2558 | opp_overlap 317877 317880 GATCTCCGACGAAAA GCGCGCAT GGCTCG AGGCGCGC GGCTGCCTGGTGTTC Rmet_3916 316555 - 318666 + | CoA-binding Rmet_3917 318709 - 319695 + | hypothetical protein TERM 228 320373 - 320387 + G 72 -11.4 -3.53012 | CTTCCAGAATCTCTA TCGCGC CAT GCGCGA TTTCCCGCCCACGCA Rmet_3918 319723 - 321036 + | hypothetical protein TERM 229 321443 - 321464 + G 75 -10.1 -3.92324 | opp_overlap 321418 ACATCGGCAGCCGCA CGACCGGCA CGAG TGCGGGTCG TTTCCTGTTGCACGG Rmet_3919 321076 - 322392 + | hypothetical protein TERM 230 322610 - 322598 - g 74 -10.5 -3.78934 | GGTGGTCGAGAACAA GCCGG GCG CCGGC ACGCGCGTGGCGAGC TERM 231 323257 - 323290 + G 74 -11.7 -3.56862 | gap 1, overlap 323283 323284 AAAAGCTTCTCGCGC TCGGC-CTGCAACCCG AGC CTGGTAGCAGCGCCGA TTTCGCCGCATTTAT Rmet_3920 322389 - 323366 + | hypothetical protein Rmet_3921 323848 - 323420 - | hypothetical protein TERM 232 323944 - 323958 + r 71 -7.1 -4.18018 | TGCCGCACCGTTCGC CAGCC CGTTC GGCTG TTTTAGCTGAAGAGC Rmet_3922 325553 - 323961 - | DNA polymerase III, epsilon subunit TERM 233 325745 - 325733 - H 83 -2.7 -5.252 | GACCGGCAGAAAAAA GTTCT GCA AAAAC TGTTGACGAAACGTT TERM 234 327832 - 327878 + H 95 -20.4 -3.01712 | opp_overlap 327838 327846 327847, overlap 327838 327844 327846 TACCTTGGGGTTGTA GTCAAAGACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTCTTTGGC TGTTGCCAACAGGCG TERM 235 327872 - 327838 - H 73 -10 -3.64703 | opp_overlap 327838 327832 327844 327846, overlap 327846 327847 GGGGTTGTAGTCAAA GACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTC TTTGGCTGTTGCCAA TERM 236 327838 - 327872 + H 93 -14.4 -3.76373 | opp_overlap 327838 327846 327847, overlap 327832 327844 327846 GGGGTTGTAGTCAAA GACAAGAATTCAGGCG AGG CGCCTGAGTGTTTGTC TTTGGCTGTTGCCAA TERM 237 327844 - 327866 + H 77 -8.4 -4.35646 | opp_overlap 327838 327846 327847, overlap 327838 327832 327846 GTAGTCAAAGACAAG AATTCAGGCG AGG CGCCTGAGTG TTTGTCTTTGGCTGT TERM 238 327846 - 327864 + H 80 -11 -3.77188 | opp_overlap 327838 327846 327847, overlap 327844 327838 327832 AGTCAAAGACAAGAA TTCAGGCG AGG CGCCTGAG TGTTTGTCTTTGGCT TERM 239 327864 - 327846 - H 76 -8.8 -4.04188 | opp_overlap 327846 327844 327838 327832, overlap 327838 327847 AGTCAAAGACAAGAA TTCAGGCG AGG CGCCTGAG TGTTTGTCTTTGGCT TERM 240 327863 - 327847 - H 72 -12.3 -3.01428 | opp_overlap 327846 327844 327838 327832, overlap 327846 327838 GTCAAAGACAAGAAT TCAGGCG AGG CGCCTGA GTGTTTGTCTTTGGC TERM 241 328037 - 328004 - H 75 -2.5 -4.90266 | TGTATCAACCAAAAA GTATTTAAAGTGATC GAAA GATGACTTGGAATAC GGCACAAACGCGAGA TERM 242 328591 - 328580 - H 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 243 331217 - 331251 + H 95 -14.4 -4.07687 | opp_overlap 331223, overlap 331218 331223 GCCAGGCTCTTATAC CCAAAACCCCCAGC CCCATAA GCTGGGGGTTTTGC TTTTGCCGGCGCGGT TERM 244 331218 - 331250 + H 89 -17.9 -3.04398 | opp_overlap 331223, overlap 331217 331223 CCAGGCTCTTATACC CAAAACCCCCAGC CCCATAA GCTGGGGGTTTTG CTTTTGCCGGCGCGG TERM 245 331245 - 331223 - H 100 -13.4 -4.2349 | opp_overlap 331218 331217 331223 CTCTTATACCCAAAA CCCCCAGCCC CAT AAGCTGGGGG TTTTGCTTTTGCCGG TERM 246 331223 - 331245 + H 95 -12 -4.67038 | opp_overlap 331223, overlap 331218 331217 CTCTTATACCCAAAA CCCCCAGC CCCATAA GCTGGGGG TTTTGCTTTTGCCGG TERM 247 331351 - 331327 - H 100 -19.3 -4.00476 | opp_overlap 331327 GAAATTCAGCACAAA GGCCCACGCCA TAG CGGCGTGGGCC TTTTTATTGCGCATT TERM 248 331327 - 331351 + H 100 -18.6 -5.08088 | opp_overlap 331327 GAAATTCAGCACAAA GGCCCACGCC ATAGC GGCGTGGGCC TTTTTATTGCGCATT TERM 249 331881 - 331904 + H 91 -13.8 -3.76232 | overlap 331882 CTAAGTCACCCTGCC AGCCGGACGC GTGC GCGTCCGGCG TTGTGTATTTCGAGG TERM 250 331882 - 331903 + H 85 -17.3 -2.85257 | overlap 331881 TAAGTCACCCTGCCA GCCGGACGC GTGC GCGTCCGGC GTTGTGTATTTCGAG TERM 251 332102 - 332116 + G 73 -9.2 -3.90291 | opp_overlap 332102 332101 332097, overlap 332114 CGCTATGCAAGCAAT GCGCGC CCG GCGTGC TTTGATTCCAGGCAT Rmet_3923 332091 - 333254 + | secretion protein HlyD Rmet_3924 333281 - 336427 + | hydrophobe/amphiphile efflux-1 HAE1 Rmet_3925 336424 - 337923 + | RND efflux system, outer membrane lipoprotein, NodT TERM 252 337977 - 337955 - T 100 -17.8 -3.65351 | opp_overlap 337955 GCACCGGCATCGAAA GGAGGCAGTC TGT GACTGCCTCC TTTTTTATTGCCTGC TERM 253 337955 - 337977 + T 100 -17.8 -5.4833 | opp_overlap 337955 GCACCGGCATCGAAA GGAGGCAGTC TGT GACTGCCTCC TTTTTTATTGCCTGC Rmet_3926 338925 - 338017 - | arginase TERM 254 338089 - 338145 + g 76 -13.8 -3.1634 | GGCGGTCTGGTTGTG GACGTC-GCGCGCTGGGTTCAGTTCGAC CAC GTCGA-TGGAGCCCAGGGCGCCGGTGTC TTCGATCATTTCCAG Rmet_3927 340012 - 339023 - | twin-arginine translocation pathway signal TERM 255 340018 - 340028 + r 76 -5.4 -4.60073 | ACTGGGACATATCAT CTCT CTC AGAG TTTTATCGTTCTATG Rmet_3928 340330 - 340094 - | hypothetical protein TERM 256 340361 - 340339 - R 90 -19.2 -3.07816 | opp_overlap 340339 340342, overlap 340342 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 257 340339 - 340361 + r 91 -19.2 -3.18264 | opp_overlap 340339 340342, overlap 340342 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 258 340358 - 340342 - R 90 -15.1 -3.68569 | opp_overlap 340339 340342, overlap 340339 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 259 340342 - 340358 + r 93 -15.1 -3.73647 | opp_overlap 340342 340339, overlap 340339 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_3929 340585 - 340370 - | hypothetical protein Rmet_3930 341472 - 340639 - | ATPase Rmet_3931 342908 - 341469 - | integrase catalytic subunit Rmet_3932 343589 - 343020 - | hypothetical protein Rmet_3933 344591 - 343656 - | hypothetical protein TERM 260 344067 - 344089 + g 91 -17.8 -3.20901 | GGCGTTACGGTCCAG CCCTGCTTGC CGG GCAAGCAGGG TTGCCTTCATCCAGT Rmet_3934 344735 - 345406 + | two component transcriptional regulator Rmet_3935 345399 - 346826 + | periplasmic sensor signal transduction histidine kinase TERM 261 347024 - 347038 + G 74 -11.4 -3.58329 | opp_overlap 347024, overlap 347014 CAGTCGGTGAGGAAA GGGCAG GTC CTGCCC TTTCGCGAGTCTTTG TERM 262 347038 - 347024 - g 77 -11.4 -3.72893 | opp_overlap 347024 347014 CAGTCGGTGAGGAAA GGGCAG GTC CTGCCC TTTCGCGAGTCTTTG TERM 263 347056 - 347074 + G 72 -8.9 -4.00038 | overlap 347067 TCGCGAGTCTTTGCT TGCGATG ACCGG CATCGCA TTTGTCGTGATGCTG Rmet_3936 346940 - 348586 + | EmrB/QacA family drug resistance transporter Rmet_3937 348634 - 349095 + | MarR family transcriptional regulator Rmet_3938 350542 - 349121 - | cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) TERM 264 349357 - 349372 + g 77 -5.4 -4.68593 | overlap 349349 349347 CGATGGCCTGATGGC CGATTG CCGC CAGTCG TTTTTGCATCGTCAC Rmet_3939 351453 - 350551 - | two component LuxR family transcriptional regulator TERM 265 351299 - 351271 - G 100 -15.3 -5.00616 | GCTGGCGTCAAAAAA GCGCCGCACGC GGGAGTG GCGTACGGCGC GAACACGCAGCAACT TERM 266 351460 - 351498 + r 95 -18.8 -3.28119 | opp_overlap 351464, overlap 351464 CGGGGACATCGAACG CAAACGACCCCGTGGCGC GAT GCACCACGGGGTCGTCGG TTGATATCAATACGT TERM 267 351464 - 351494 + r 100 -22.6 -2.58892 | opp_overlap 351464, overlap 351460 GACATCGAACGCAAA CGACCCCGTGGCGC GAT GCACCACGGGGTCG TCGGTTGATATCAAT TERM 268 351494 - 351464 - R 100 -24.8 -3.77666 | opp_overlap 351460 351464 GACATCGAACGCAAA CGACCCCGTGGCGC GAT GCACCACGGGGTCG TCGGTTGATATCAAT Rmet_3940 352472 - 351519 - | LysR family transcriptional regulator Rmet_3941 353158 - 353454 + | hypothetical protein Rmet_3942 354344 - 353451 - | integrase catalytic subunit Rmet_3943 354637 - 354341 - | transposase IS3/IS911 Rmet_3944 354699 - 354929 + | transposase IS3/IS911 Rmet_3945 355052 - 355369 + | hypothetical protein TERM 269 355568 - 355545 - g 74 -11 -3.59979 | opp_overlap 355544, overlap 355557 CTGGCGCAGGCCAAA CTGGACAAGC CACA GCTTGACCAG CTGCTTGCACCGGTT TERM 270 355943 - 355913 - g 90 -11 -4.33105 | CAACGAGCAGCAAAA GGTGGTCACGCAGC AGA GCGGCGGCACCACC ATCGTCCAGATCGAG Rmet_3946 355461 - 356873 + | hypothetical protein TERM 271 357249 - 357222 - g 77 -8.3 -4.24002 | TGGCAAAGCGTAAAA CCGGCTGGCAG TTCGAT CTGGCTGCCGG CGAGCAGGAGATGCG Rmet_3947 356876 - 357721 + | hypothetical protein Rmet_3948 358411 - 357752 - | Crp/FNR family transcriptional regulator Rmet_3949 358779 - 359852 + | esterase, PHB depolymerase TERM 272 359916 - 359892 - T 100 -20.1 -4.98531 | opp_overlap 359892 CGCCCAAATGAAAAA GGGGGAAGGCT GTC AGCCTTCCCCC TTTTCGATTGTGCCA TERM 273 359892 - 359916 + T 100 -20.1 -4.3208 | opp_overlap 359892 CGCCCAAATGAAAAA GGGGGAAGGCT GTC AGCCTTCCCCC TTTTCGATTGTGCCA Rmet_3950 361266 - 359956 - | major facilitator transporter TERM 274 361179 - 361147 - G 73 -12.6 -3.40784 | opp_overlap 361146 361144 AATGAAATCGTAGAA CTCGAGCGCGCCGC CAAGT GCGGCAAGCGCGAG CGTCTTGTAATCCTG TERM 275 361769 - 361757 - g 82 -6.2 -4.82901 | overlap 361742 TCTGGTGGAGAAAAA CGCC ACCGA GGCG CTTGGGCGCAAGGTG TERM 276 362447 - 362423 - g 70 -2.1 -4.63218 | TTTCCGTCAAGAAAA GGACAAGCA GGACCTG TACGTGTCC GGAACCATTGCCCTG TERM 277 363309 - 363270 - g 78 -12.9 -3.53091 | gap 3, overlap 363252 363248 AGCCCGGCGCCGAAA GGCC-GCGCGG--GCCGCGC GCA ACGCGGCAACCGCGCTAGCC AGCGCGTGGCAGACA Rmet_3951 361548 - 365561 + | hypothetical protein Rmet_3952 365672 - 365857 + | rubredoxin-type Fe(Cys)4 protein Rmet_3953 366308 - 366120 - | hypothetical protein Rmet_3954 366585 - 367088 + | hypothetical protein TERM 278 367185 - 367217 + F 100 -12.8 -5.55769 | gap 1 CGCGCGTGGCCACGA TGGCGGATCGGGAAG TAAG CTTCCCC-TCCGCCA TTTTTTATTGTGGCC TERM 279 368168 - 368223 + G 93 -20.2 -2.78384 | opp_overlap 368156 368155 AAGGTCGCCGCTCCC ACCGCTGCGCCAGCCGAAGGCCCCGC TGTG GCGGGCGCGTCGGCTGGCGCCGCCGA TCTCGTGGCGCAGGG Rmet_3955 367364 - 368539 + | cytochrome c oxidase, subunit II Rmet_3956 368577 - 370334 + | cytochrome c oxidase, subunit I Rmet_3957 370331 - 370999 + | cytochrome c oxidase subunit III Rmet_3958 371012 - 371716 + | cytochrome c oxidase, subunit III Rmet_3959 371725 - 372078 + | hypothetical protein TERM 280 372056 - 372066 + F 78 -2.4 -5.09225 | ATTACACTTTCCTGA CTCG CGG CGTG TTTTTTCACTGAAGT Rmet_3960 372138 - 373337 + | hypothetical protein Rmet_3961 374853 - 373426 - | succinate semialdehyde dehydrogenase TERM 281 374637 - 374672 + g 70 -2.4 -4.6635 | gap 1 GGGTCAGTTCTGCTA CG-CGGCGCAGGATC TGCGAGC GTTCCAGCGGCGACG TTTTCTTCCAGGTTT Rmet_3962 375086 - 376564 + | MATE efflux family protein TERM 282 376678 - 376652 - f 88 -13.7 -3.69434 | overlap 376653 GTAAGCAAGTCGAAA GCTGCGCGGCA TCCTC TGCCGCGCAGT GCCGCGCCAATCCGC TERM 283 376677 - 376653 - f 84 -17.2 -2.81178 | overlap 376652 TAAGCAAGTCGAAAG CTGCGCGGCA TCCTC TGCCGCGCAG TGCCGCGCCAATCCG Rmet_3963 376945 - 377439 + | hypothetical protein Rmet_3964 377453 - 378955 + | hypothetical protein TERM 284 378988 - 378968 - f 95 -19.7 -3.41527 | TAATTCTGACGACAA GCGCCGGCG TCA CGCCGGCGC GAACCGAGTAAGCTT TERM 285 379005 - 379027 + F 100 -14.1 -4.49958 | opp_overlap 379000 AACCGAGTAAGCTTT CGGGGGTGC CAAAA GCGCCCCCG TTTCTTTGATGCACT Rmet_3965 379085 - 379426 + | PadR family transcriptional regulator TERM 286 379475 - 379438 - T 76 -9.8 -3.80189 | ATAGACCAATGCAAA TGCCGGTACGTTGCCT GGAATG AGGCGCGGTACCGGCA TCGTCATGCAAGCAT TERM 287 379624 - 379585 - T 100 -25.9 -4.59773 | opp_overlap 379557 GCGCAGTGTGAAAAA GCGCCGGTGCAGCGTCT TGTTGG AAACGCTGCACCGGCGC CGGGGTGGCAACTTT Rmet_3966 382114 - 379649 - | hypothetical protein TERM 288 382574 - 382563 - R 84 -5.8 -4.98531 | overlap 382556 TGTGGAAACCAAAAA CTGG ATGC CCAG GAAACCGAAGATTCG Rmet_3967 383600 - 382593 - | response regulator receiver modulated diguanylate cyclase TERM 289 383009 - 383021 + g 74 -10.5 -3.75153 | CGAGCTGGGTCTGTT CGCGC TGG GCGCG TTTCCATTCCGCGCC Rmet_3968 384640 - 383624 - | chemotaxis-specific methylesterase TERM 290 384154 - 384116 - G 72 -11.7 -3.53224 | gap 2, overlap 384117 GACCGCCGCGCCAAA GTCG-GCTGGCAACGC-GC CGA GCAGCGTGGCCAGCGCGGC CGGGCCGCCGGCCGA Rmet_3969 386943 - 384637 - | CheA signal transduction histidine kinases Rmet_3970 387692 - 386940 - | CheW protein Rmet_3971 388974 - 387685 - | MCP methyltransferase, CheR-type TERM 291 388050 - 388066 + g 72 -11.5 -3.53224 | TCGCCGCCACATCCG GCGCGCG CGC CGCGTGC TTTGCCGGGGCGGTG TERM 292 388765 - 388753 - G 74 -4.7 -4.56597 | GCGGTGCCGGAAAAA CCAGG TTT CCGGG ACAACGACGGACTCG TERM 293 388842 - 388863 + g 71 -10.1 -3.61398 | overlap 388829 AGGTCGCCGGGTCAT CGGCGCC CATGGCCT GGCGCCG TTCTTCCACCGCGCG Rmet_3972 389444 - 388971 - | CheW protein Rmet_3973 391292 - 389472 - | methyl-accepting chemotaxis sensory transducer TERM 294 391484 - 391500 + G 81 -9.3 -4.29325 | opp_overlap 391472 AAACGCGCCTGCATA GCGAGGC GAC GCCCCGC TTTTCCCTGTTGCTG Rmet_3974 391366 - 392691 + | diguanylate cyclase/phosphodiesterase Rmet_3975 392880 - 395387 + | putative chromosome segregation ATPases TERM 295 395493 - 395459 - T 100 -19.5 -3.54424 | gap 1, opp_overlap 395460 395461 395465, overlap 395461 395465 CGCCACCGCCTGAAA GACAAAGGGCGTCCGA ATCA TCGGACGCCCTTTG-C TTTCTCTCCACTTGC TERM 296 395460 - 395493 + T 100 -19.7 -4.06491 | opp_overlap 395459 395461 395465, overlap 395461 395465 GCCACCGCCTGAAAG ACAAAGGGCGTCCGA ATCA TCGGACGCCCTTTGC TTTCTCTCCACTTGC TERM 297 395461 - 395492 + T 100 -23.2 -3.03412 | opp_overlap 395459 395461 395465, overlap 395460 395465 CCACCGCCTGAAAGA CAAAGGGCGTCCGA ATCA TCGGACGCCCTTTG CTTTCTCTCCACTTG TERM 298 395492 - 395461 - T 100 -23.2 -3.35046 | opp_overlap 395461 395460 395465, overlap 395459 395465 CCACCGCCTGAAAGA CAAAGGGCGTCCGA ATCA TCGGACGCCCTTTG CTTTCTCTCCACTTG TERM 299 395465 - 395488 + T 100 -18.2 -4.18042 | opp_overlap 395461 395459 395465, overlap 395461 395460 CGCCTGAAAGACAAA GGGCGTCCGA ATCA TCGGACGCCC TTTGCTTTCTCTCCA TERM 300 395488 - 395465 - T 100 -18.2 -4.32857 | opp_overlap 395465 395461 395460, overlap 395461 395459 CGCCTGAAAGACAAA GGGCGTCCGA ATCA TCGGACGCCC TTTGCTTTCTCTCCA Rmet_3976 396753 - 395581 - | extracellular ligand-binding receptor Rmet_3977 397563 - 396856 - | ABC transporter related Rmet_3978 398314 - 397550 - | ABC transporter related Rmet_3979 399335 - 398307 - | inner-membrane translocator Rmet_3980 400218 - 399355 - | inner-membrane translocator TERM 301 399981 - 399970 - G 73 -5.8 -4.4009 | overlap 399972 399975 GCGCAGCGGATAAAA GACC AGGC GGTC CGCCAGCATCGACAG TERM 302 400268 - 400296 + H 83 -2.5 -5.17353 | gap 3, overlap 400270 400272 CCGACACTGTCTGTT G-ACG-CCGTGACG TTCT CG-CACGGTCGTTC TTTTTTGGTCACTGT TERM 303 400270 - 400293 + H 76 -5.3 -4.67552 | overlap 400268 400272 GACACTGTCTGTTGA CG-CCGTGACG TTCT CG-CACGGTCG TTCTTTTTTGGTCAC Rmet_3981 400527 - 401369 + | IclR family transcriptional regulator Rmet_3982 401407 - 402219 + | short-chain dehydrogenase/reductase SDR Rmet_3983 402289 - 403275 + | hypothetical protein TERM 304 403323 - 403294 - T 72 -12.7 -3.07043 | opp_overlap 403295 CGCATGATCCCAACA CGGGCCGGGGCCC TCGC GAGTCCCGGCCCT TGGGTAATCAGGCGT TERM 305 403295 - 403322 + T 83 -16.2 -3.09516 | opp_overlap 403294 GCATGATCCCAACAC GGGCCGGGGCCC TCGC GAGTCCCGGCCC TTGGGTAATCAGGCG Rmet_3984 404752 - 403331 - | major facilitator transporter Rmet_3985 408380 - 404910 - | Hpt sensor hybrid histidine kinase TERM 306 405412 - 405424 + g 74 -4.7 -4.46404 | opp_overlap 405410, overlap 405410 405421 CTGAATGCGAAAACC GGCAG CGG CGGCC TTTTGGTCTTGATTG Rmet_3986 409042 - 408389 - | two component LuxR family transcriptional regulator TERM 307 409261 - 409230 - R 80 -11 -3.73072 | gap 1, opp_overlap 409231 409236, overlap 409231 AATGTCGCTATGAAA TCTCAACTGC-ACGA CTA TCGTCGCAGTTGAGT TGGATATGGGAAGGT TERM 308 409231 - 409260 + r 80 -14.5 -3.12351 | gap 1, opp_overlap 409230 409231, overlap 409236 ATGTCGCTATGAAAT CTCAACTGC-ACGA CTA TCGTCGCAGTTGAG TTGGATATGGGAAGG TERM 309 409260 - 409231 - R 77 -14.5 -2.83522 | gap 1, opp_overlap 409231 409236, overlap 409230 ATGTCGCTATGAAAT CTCAACTGC-ACGA CTA TCGTCGCAGTTGAG TTGGATATGGGAAGG Rmet_3987 410356 - 409421 - | hypothetical protein Rmet_3988 410435 - 410869 + | hypothetical protein Rmet_3989 411370 - 410927 - | hypothetical protein TERM 310 411202 - 411190 - G 70 -6.2 -4.29738 | CGATATTCAGGAAAA GCCG AGAGA CGGC TTCCCGATCACCTTC Rmet_3990 412119 - 411394 - | GTP cyclohydrolase Rmet_3991 413486 - 412227 - | arsenical pump membrane protein Rmet_3992 415561 - 413498 - | penicillin-binding protein 1A TERM 311 414433 - 414416 - G 71 -14.1 -2.71712 | overlap 414415 CGTGCCGGGCGAAAT GCCGCGC TCCA GCGCGGC CGAATAGATGAACGG TERM 312 414586 - 414568 - G 70 -13.8 -2.64933 | opp_overlap 414566 CATCGAGCGAGACCA GCGCCGCC TGG GGCAGCGC GACCTGTGCCTTCGC Rmet_3993 416453 - 415563 - | hypothetical protein Rmet_3994 416598 - 416831 + | hypothetical protein Rmet_3995 419162 - 416838 - | glycoside hydrolase family protein TERM 313 419613 - 419594 - g 71 -12.2 -3.29471 | opp_overlap 419596 CGCCGATTACATCAA GATCCAGC CTAA GCTGGATC ATCTGGCCTGGAACG mdoG 419370 - 420980 + | glucan biosynthesis protein G Rmet_3997 421223 - 420993 - | hypothetical protein Rmet_3998 422007 - 421297 - | hypothetical protein Rmet_3999 424482 - 422017 - | TonB-dependent siderophore receptor TERM 314 422750 - 422718 - G 71 -9.1 -3.71378 | overlap 422742 TACCGTAGAGGGAAA GCGCCGGCGTC CATTTGTAGAC GATGCCGGCGC GCGGCAGCCACTTCT TERM 315 422849 - 422794 - G 85 -16.9 -3.14132 | opp_overlap 422794 CGTGTTCGTGACGAA CGGTCGGCCGCGTCCGGCTACCTG-GC TGTA GCTCAGGTAGCGTG-CGCCGCCGACCA GGATCCATTTGTCCG Rmet_4000 425523 - 424579 - | FecR family protein TERM 316 425330 - 425386 + g 82 -15.8 -3.08133 | GAGCGCGGCGTAGTC AGCGCCGCGTGCGCGACGGC-CGTGGTC AGT GGCGACGCGACGTCGCGCA-GCCGCGCA TTCACTGCCTCGATC Rmet_4001 426062 - 425553 - | sigma-24 (FecI-like) Rmet_4002 427514 - 426300 - | response regulator receiver/diguanylate phosphodiesterase TERM 317 426405 - 426424 + g 72 -11.4 -3.55622 | gap 1 CCCGAGTGCGTGAAG CGCC-GCGC ACT GCGCAGGCG TTTCCACGCCTTCGG TERM 318 427927 - 427939 + G 74 -4.7 -4.52703 | overlap 427907 427911 427928 CACGCCAGGTCGAAG CCGGC GGC GCCGA TTTTGTCGTGCTTTG Rmet_4003 427710 - 428438 + | aspartate racemase TERM 319 428495 - 428506 + F 74 -3.6 -4.77165 | TTCTCTATGTTGTTG CGTC AGGG GGCG TTTTATTCTCGGGCC TERM 320 428587 - 428615 + F 100 -14.7 -5.44119 | overlap 428585 GAGCCATGTTTCCCT TGCCTCAAGTTGT CCT GCGACTTGAGGCA TTTTTTTGCCCTGAG TERM 321 429136 - 429098 - g 70 -10.9 -3.42056 | gap 1, overlap 429100 429101 ATTTGGAAGGCAGAA GATGTC-AGCCTGCGGGC CATG GCCCGCAGGCTTGGCCGC GCGCCTTCGACACTG TERM 322 429134 - 429100 - g 71 -12.1 -3.281 | gap 1, overlap 429098 429101 TTGGAAGGCAGAAGA TGTC-AGCCTGCGGGC CATG GCCCGCAGGCTTGGCC GCGCGCCTTCGACAC TERM 323 429133 - 429101 - g 77 -15.6 -2.56539 | gap 1, overlap 429100 429098 TGGAAGGCAGAAGAT GTC-AGCCTGCGGGC CATG GCCCGCAGGCTTGGC CGCGCGCCTTCGACA Rmet_4004 429029 - 430048 + | integrase catalytic subunit Rmet_4005 430085 - 430987 + | fimbrial protein Rmet_4006 431750 - 431115 - | hypothetical protein TERM 324 431515 - 431530 + g 84 -6.8 -4.84311 | overlap 431516 TTGATCCAGCCGCGC TGCTCC GCCA GGAGCG TTTTCTTCTGTGGGG Rmet_4007 432160 - 431774 - | protein of unknown function DUF861, cupin_3 Rmet_4008 432717 - 432226 - | PilT protein-like protein TERM 325 432681 - 432646 - G 91 -6.6 -5.03314 | opp_overlap 432651 432653, overlap 432647 432648 GGCATCCTCAAAAAA TTCGAGCACGCCCGGG TTCG CCCGGGCGCTCTTGCG TTGCTCGCTGATGAT TERM 326 432680 - 432647 - G 71 -10.1 -3.61506 | opp_overlap 432651 432653, overlap 432646 432648 GCATCCTCAAAAAAT TCGAGCACGCCCGGG TTCG CCCGGGCGCTCTTGC GTTGCTCGCTGATGA TERM 327 432679 - 432648 - G 71 -13.6 -2.76422 | opp_overlap 432651 432653, overlap 432647 432646 CATCCTCAAAAAATT CGAGCACGCCCGGG TTCG CCCGGGCGCTCTTG CGTTGCTCGCTGATG TERM 328 432653 - 432674 + g 72 -12.9 -3.16676 | opp_overlap 432648 432647 432646, overlap 432651 TCAAAAAATTCGAGC ACGCCCGGG TTCG CCCGGGCGC TCTTGCGTTGCTCGC Rmet_4009 433110 - 432733 - | hypothetical protein TERM 329 433096 - 433069 - G 100 -12 -5.07652 | opp_overlap 433087, overlap 433071 TGCCGCAAAAGAAAA TACCCCGGCG CGCGGGAT CGCCGGGGCA GCAAGAGTTGCCAAG TERM 330 433094 - 433071 - G 85 -12.4 -4.16397 | opp_overlap 433087, overlap 433069 CCGCAAAAGAAAATA CCCCGGCG CGCGGGAT CGCCGGGG CAGCAAGAGTTGCCA Rmet_4010 433800 - 433210 - | shikimate kinase TERM 331 433693 - 433660 - G 71 -10.3 -3.61398 | gap 2, opp_overlap 433653 GTCGGTGTCGAAGAA CGGGCG-GCCG-AGC TCGTGC GCCACGGCGCGCCCG ATCGTCGTCTTGCCG Rmet_4011 435223 - 433844 - | major facilitator transporter Rmet_4012 436455 - 435502 - | LysR family transcriptional regulator Rmet_4013 436561 - 437274 + | protocatechuate 3,4-dioxygenase, beta subunit Rmet_4014 437279 - 437848 + | protocatechuate 3,4-dioxygenase, alpha subunit TERM 332 437864 - 437893 + G 100 -22.9 -3.65351 | opp_overlap 437867 TCTGATGCACTGCAA GCAGGGCGCGGGG TTTC CCCCGTGCCCTGC TTTGCATGACAATCG TERM 333 437890 - 437867 - g 75 -15.2 -2.73681 | opp_overlap 437864 GATGCACTGCAAGCA GGGCGCGGGG TTTC CCCCGTGCCC TGCTTTGCATGACAA TERM 334 438814 - 438794 - g 73 -12.5 -3.30441 | CACGATGCCCCACAA GCGCAACCC GGT GGGATGCGC GGCGGTGCTGACCGC Rmet_4015 437853 - 439325 + | 3-carboxy-cis,cis-muconate cycloisomerase Rmet_4016 439359 - 440537 + | 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase Rmet_4017 441470 - 440541 - | AraC family transcriptional regulator Rmet_4018 441598 - 442794 + | 4-hydroxybenzoate 3-monooxygenase Rmet_4019 442961 - 443740 + | exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase Rmet_4020 443865 - 444161 + | hypothetical protein Rmet_4021 444943 - 444158 - | NAD(P)H dehydrogenase (quinone) Rmet_4022 445037 - 445933 + | LysR family transcriptional regulator Rmet_4023 446463 - 446056 - | hypothetical protein Rmet_4024 446839 - 446504 - | hypothetical protein Rmet_4025 446942 - 448090 + | major facilitator transporter Rmet_4026 448874 - 448155 - | putative periplasmic ligand-binding sensor protein Rmet_4027 449007 - 449963 + | prolyl aminopeptidase TERM 335 450050 - 450034 - g 74 -2.1 -4.82901 | opp_overlap 450035 450037, overlap 450035 TGCGTTGCACAAAAA TCACCTG TCG CGGGTGT CATTGCCGCGAATCG Rmet_4028 449997 - 450296 + | hypothetical protein Rmet_4029 452858 - 450360 - | MscS mechanosensitive ion channel TERM 336 452884 - 452864 - H 76 -9 -4.09805 | gap 1 GGATGAACAACGAAA GCGCAGCCG CGCA CGG-TGCGC TGGGCCGCCACTTTC TERM 337 453305 - 453285 - g 72 -11.1 -3.43203 | opp_overlap 453293 CCAGCAGAAGATCAA TCTGCGCCC GGT GGGCGAAGA CACCGTTGCATGGTT Rmet_4030 453124 - 453531 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_4031 453528 - 453917 + | cytochrome c, class I Rmet_4032 454319 - 454002 - | hypothetical protein TERM 338 454323 - 454333 + r 74 -3.2 -4.80167 | GACGGTTTTCATCCC GGTT TTC AGCC TTTTCCTTTTTCCTG Rmet_4033 455337 - 454357 - | LysR family transcriptional regulator Rmet_4034 455555 - 455890 + | peptidase TERM 339 455937 - 455903 - f 72 -14.2 -2.62616 | opp_overlap 455892 TGACTCCCGACAGTA TGGCCGGATCGTTTCC CTC GGAGGCGATCCGGCCC GGAGACCTCATGGAA Rmet_4035 455947 - 456543 + | phosphoesterase, PA-phosphatase related Rmet_4036 456614 - 457396 + | hypothetical protein Rmet_4037 457426 - 457875 + | putative signal peptide protein Rmet_4038 457885 - 458643 + | hypothetical protein Rmet_4039 458666 - 459331 + | two component transcriptional regulator Rmet_4040 459328 - 460659 + | periplasmic sensor signal transduction histidine kinase Rmet_4041 460688 - 461119 + | hypothetical protein Rmet_4042 461800 - 461186 - | resolvase-like protein Rmet_4043 463078 - 461861 - | TniQ Rmet_4044 463983 - 463075 - | TniB Rmet_4045 465704 - 463986 - | integrase catalytic subunit Rmet_4046 465782 - 467656 + | gamma-glutamyltransferase 2 Rmet_4047 467714 - 468703 + | hypothetical protein Rmet_4048 468703 - 469221 + | hypothetical protein Rmet_4049 469447 - 469238 - | hypothetical protein TERM 340 469424 - 469441 + g 75 -9.1 -3.96093 | overlap 469425 469427 CACAGGCACTGCGCT CCCTGAC ACCC GTCGGGG TTTCATGTTCCTGTC Rmet_4050 470447 - 469455 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 341 469590 - 469578 - G 74 -4.7 -4.56597 | CTGCTGGGGGAAAAA GCGCC ACA GCCGC TCCGCACCCTCGACA TERM 342 470301 - 470279 - G 81 -16.4 -2.55544 | opp_overlap 470270, overlap 470275 TGACGACGGAAGGCA GCATCGCGAA GAA TTCGCGATGC TGGTCGGGCATGTAA Rmet_4051 471174 - 470503 - | glutathione S-transferase-like protein Rmet_4052 472173 - 471271 - | LysR family transcriptional regulator Rmet_4053 473271 - 472186 - | hypothetical protein TERM 343 472852 - 472864 + g 70 -5.5 -4.26076 | GCTGGCCTGCAACGC GCTGG CGC TCAGC TTTTCCTGCAAGTCC Rmet_4054 474404 - 473370 - | cytochrome C biogenesis protein Rmet_4055 474948 - 474397 - | periplasmic protein thiol Rmet_4056 476987 - 474945 - | cytochrome c-type biogenesis protein CcmF Rmet_4057 477433 - 476984 - | cytochrome c-type biogenesis protein CcmE Rmet_4058 478352 - 477573 - | heme exporter protein CcmC TERM 344 478298 - 478266 - G 88 -15.6 -3.30124 | gap 1 CGCGAGCGGGTAGAA GCGCACTGGCGCGGC AAAG GCCA-GCCAGCGCGC CCGCGCGGTGCGTGG Rmet_4059 479025 - 478357 - | heme exporter protein CcmB Rmet_4060 479657 - 479022 - | cytochrome c biogenesis protein CcmA Rmet_4061 480248 - 479661 - | periplasmic nitrate reductase subunit NapC Rmet_4062 480760 - 480269 - | periplasmic nitrate reductase subunit NapB Rmet_4063 483273 - 480778 - | nitrate reductase TERM 345 483067 - 483079 + g 73 -9.1 -3.8917 | AAGCGGGTCGCCCTG GGTGG CCA CCACC TTGTTGTCCTTGACC Rmet_4064 483583 - 483254 - | periplasmic nitrate reductase chaperone NapD Rmet_4065 483843 - 483679 - | periplasmic nitrate reductase NapE Rmet_4066 483858 - 484742 + | methyltransferase type 11 Rmet_4067 485692 - 484715 - | twin-arginine translocation pathway signal TERM 346 485731 - 485753 + r 71 -9 -3.75738 | overlap 485733 TCGTGTCGGGGCGCG GTGGCGGGCT GTC AGCCCACCTC TTGTTCGTCCTGCTC TERM 347 485733 - 485751 + r 70 -10.2 -3.45742 | overlap 485731 GTGTCGGGGCGCGGT GGCGGGCT GTC AGCCCACC TCTTGTTCGTCCTGC Rmet_4068 487481 - 485742 - | acyl-CoA synthetase Rmet_4069 490940 - 487560 - | carbamoyl-phosphate synthase L chain, ATP-binding TERM 348 489875 - 489849 - G 93 -17.3 -3.42354 | gap 1 TAGCTGAACGGAGAA CCCG-CGCGCCG TGGG CGGCGCGGCGGG GTCGAGACCCAGGTC TERM 349 490114 - 490150 + g 71 -10.8 -3.56862 | gap 1 GCCTGCACGATGCGG TCGCGCAGGG-CGGGTG TCAG CACCGGGCTCGGCGCGA TTTCCACCAGTTTCT TERM 350 490189 - 490207 + g 72 -11 -3.52102 | CGCTGTAGCGTGCAA TCGCGTTC GCC GAGCGCGA TTGTCTCAGTCCCAT Rmet_4070 491941 - 491048 - | LysR family transcriptional regulator Rmet_4071 492054 - 493229 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4072 493265 - 493726 + | hypothetical protein TERM 351 494502 - 494459 - g 73 -11.8 -3.30124 | GTTTATCCGCGACAA GCGGA-TGCGCGCGCTAGCC GTCACT AGC-AGCGCGCGCAGTTCGC AACTCCCGGACGTGC Rmet_4073 493785 - 494783 + | hypothetical protein Rmet_4074 494826 - 495986 + | acyl-CoA dehydrogenase-like protein Rmet_4075 496166 - 497161 + | acyl-CoA dehydrogenase-like protein TERM 352 497167 - 497213 + T 95 -17.9 -3.29739 | GGCAGCGTAGTCGCA GGGACGGCCACGGCCCTCTCC ACGCG GGAGCGGGCCGTCGTCGATCC TTGGTGTGCGTTACA Rmet_4076 498018 - 497224 - | short-chain dehydrogenase/reductase SDR Rmet_4077 499551 - 498208 - | TRAP transporter solute receptor TAXI family protein TERM 353 499714 - 499731 + r 85 -12.7 -3.71552 | opp_overlap 499714 GGGAGCAAGAAAAAA GGCCGCA TGAA TGCGGCC TTCTCTTCGTGCGAT TERM 354 499731 - 499714 - R 100 -12.7 -5.5112 | opp_overlap 499714 GGGAGCAAGAAAAAA GGCCGCA TGAA TGCGGCC TTCTCTTCGTGCGAT Rmet_4078 501332 - 499905 - | major facilitator transporter TERM 355 502035 - 502061 + H 100 -9.3 -5.40072 | opp_overlap 502033, overlap 502036 ACCGGCGAATTGACA CGCCGCGGCCG CCCAA TGGTCGCGGCA TTTTTTTGCGCCCGA TERM 356 502036 - 502060 + H 85 -12.8 -3.83561 | opp_overlap 502033, overlap 502035 CCGGCGAATTGACAC GCCGCGGCCG CCCAA TGGTCGCGGC ATTTTTTTGCGCCCG TERM 357 502475 - 502420 - H 88 -19.6 -2.56914 | gap 1, opp_overlap 502425, overlap 502416 TAGTTCAGGAAGGCA GTCTGGCCGCTGC-CGCCGCCCGCGGT CCA ACCGTGGGCGGCAAGCGGCAGGCAGCC GATTCGTCCGCCGCG Rmet_4080 502667 - 503050 + | hypothetical protein Rmet_4081 503692 - 503243 - | hypothetical protein Rmet_4082 504163 - 503870 - | hypothetical protein Rmet_4083 504543 - 504259 - | hypothetical protein TERM 358 505005 - 504984 - g 75 -9.5 -3.965 | CGTGAAAATGAACAA CGAAGTCAT CTCG ATGACTCCG GAAACGAGCGCCGTG Rmet_4084 504646 - 506106 + | alkaline phosphatase TERM 359 506403 - 506380 - g 74 -11 -3.59315 | CCAACGACGCGCAAA CCACCGACAG CGCA CCGTCGATGG CTGCCTACATGACCG Rmet_4085 506142 - 507545 + | alkaline phosphatase TERM 360 507590 - 507615 + F 95 -16.1 -3.71649 | overlap 507591 CGTGCCCGTGCCATG ACGCACGCCGG TTCG CCGGCGTGCGC TTTCCACTTTCAGCA TERM 361 507591 - 507614 + F 88 -19.6 -2.82668 | overlap 507590 GTGCCCGTGCCATGA CGCACGCCGG TTCG CCGGCGTGCG CTTTCCACTTTCAGC Rmet_4086 507636 - 508385 + | putative signal peptide protein Rmet_4087 509048 - 508446 - | hypothetical protein Rmet_4088 510697 - 509045 - | hypothetical protein Rmet_4089 511946 - 510675 - | hypothetical protein TERM 362 512232 - 512197 - R 78 -9.8 -3.90856 | gap 1, opp_overlap 512230, overlap 512206 AACCGGCGAATGAAA CTGCATGAATCAGCGCC CGG AGCGCTGATCCAT-CTG CCCCAGCACGTGCCG Rmet_4090 512619 - 512206 - | MerR family transcriptional regulator Rmet_4091 512688 - 513950 + | NADH:flavin oxidoreductase/NADH oxidase Rmet_4092 514896 - 513979 - | LysR family transcriptional regulator Rmet_4093 515077 - 515775 + | Pirin-like protein TERM 363 516069 - 516080 + G 72 -3.6 -4.67982 | TGGCGGCATTCTGCG TGGC GACA GCCG TTTTCTTCCATCACA Rmet_4094 515828 - 516250 + | DoxX TERM 364 516621 - 516637 + G 70 -5.7 -4.28067 | CATCGTTACCAGGGA CGGCCGC ATT GTTGCCG TTTATCTCTTCTTCG Rmet_4095 516301 - 516666 + | hypothetical protein Rmet_4096 516755 - 517354 + | TrpR binding protein WrbA TERM 365 517418 - 517456 + T 95 -20.4 -2.52464 | GGGCGCCTTGCCGTG CGTCGCTTCCTTTTCGCC CAT GGCGGGAAGGAAGCGACA TGCGTTCCCGGCGCG Rmet_4097 518604 - 517480 - | porin Rmet_4098 518700 - 519410 + | hypothetical protein TERM 366 520114 - 520139 + G 74 -10.5 -3.78775 | GCGCGTCGAGACCTC GCTGCTGCA GGCATCGA TGCAGCAGC TTTACTGGTACGCGG Rmet_4099 519497 - 520732 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 367 521485 - 521511 + G 81 -5 -4.95896 | overlap 521492 CTGCCGGCGCTTGCT GACCGTCTTCCG GCT CGGAATTCGATC TTTTTCTCCGTTTAT TERM 368 522121 - 522131 + G 70 -4.6 -4.40358 | CAGTCGGACGAACTG CTGC ACT GCGG TTTTCTGACATCGCT TERM 369 522213 - 522194 - g 71 -10 -3.64822 | gap 1, opp_overlap 522167 ATGCGCTGAGCGAAA CGGTCGCCA GCA TGGCG-CCG CTCGCGGTGCTTGGC Rmet_4100 520741 - 522378 + | enoyl-CoA hydratase/isomerase Rmet_4101 522426 - 523412 + | hypothetical protein Rmet_4102 523512 - 524147 + | TetR family transcriptional regulator Rmet_4103 524155 - 525264 + | NADH:flavin oxidoreductase/NADH oxidase Rmet_4104 527518 - 525533 - | sigma-54 dependent trancsriptional regulator TERM 370 527626 - 527644 + H 90 -14.6 -3.60296 | opp_overlap 527626 AGCAGGGGCGCGAAA GTGTCCGG ATT CCGGACAC TTTCGCGTAGGCGTC TERM 371 527644 - 527626 - H 90 -14.6 -3.5393 | opp_overlap 527626 AGCAGGGGCGCGAAA GTGTCCGG ATT CCGGACAC TTTCGCGTAGGCGTC Rmet_4105 527820 - 529988 + | acetone carboxylase, beta subunit Rmet_4106 530000 - 532324 + | acetone carboxylase, alpha subunit Rmet_4107 532348 - 532857 + | acetone carboxylase, gamma subunit TERM 372 532997 - 532946 - T 80 -14.5 -3.03443 | gap 3, overlap 532942 532944 GCACGAGCAGAGATA CG-CC-GGCGACC-GGCAGCATCGTC CAC GACGCTGCCGCCTAGCCGCCTGGTCG GGCAGCGGCGTCACG Rmet_4108 533813 - 533037 - | hypothetical protein Rmet_4109 534863 - 533859 - | hypothetical protein Rmet_4110 534973 - 535611 + | transcriptional regulator Rmet_4111 535751 - 536275 + | MOSC domain-containing protein Rmet_4112 536275 - 537228 + | oxidoreductase FAD-binding region Rmet_4113 537398 - 538258 + | hypothetical protein TERM 373 538948 - 538919 - g 81 -12.2 -3.86916 | CACGACGACATGAAA CTGCTCATCGTC ACCCGG GACGATGCGCAG GTGCTGAGCCATCCC TERM 374 539059 - 539037 - g 70 -11.3 -3.35813 | gap 1 GGCTATTGGAAGGAA TGCCGCTGGC CGAG GCC-GCGGCA AGCGCCAGCGACCAC pdxK 538295 - 539161 + | pyridoxal kinase Rmet_4115 539166 - 539417 + | hypothetical protein Rmet_4116 540329 - 539475 - | phosphatidylserine decarboxylase TERM 375 540346 - 540372 + r 83 -15.8 -3.05069 | overlap 540343 GAGGCGGGCGTTGGG GCGACCCGGTGC AAC GCATCGGGCCGC TGATTGTTTCATGGG Rmet_4117 541794 - 540499 - | GntR family transcriptional regulator Rmet_4118 542124 - 541873 - | hypothetical protein TERM 376 541949 - 541937 - G 81 -3.3 -5.07567 | GCATAGGGCAAAAAA CGGTG ATG CAGCG GAATCGGGGACACCG TERM 377 542161 - 542175 + H 73 -4.3 -4.61527 | GTTGTATCGTATTCG TCACA AGAAA TGTGA TTTTTACCGGCTTTT Rmet_4119 542206 - 542643 + | hypothetical protein TERM 378 542651 - 542686 + F 72 -11.1 -3.34895 | gap 1 TCGTCTGATCGCTCA GGC-CGCCGTCCGTGC TGACT GCACGCGCGGTGCGCC TTCATTGCCCCTGAG TERM 379 542978 - 542962 - g 78 -13.7 -3.28712 | GCTGCCTCGCCACAA GCGGCGA AGC TCGCCGC CAAGGCCATGGCGCG Rmet_4120 542842 - 544224 + | outer membrane efflux protein TERM 380 544548 - 544526 - g 83 -14.8 -3.20723 | CGGCCAGGAAGTCAA GGCCGGCCAG GTG CTGGCCCGCC TGCACAGTAGTGAAC Rmet_4121 544227 - 545381 + | secretion protein HlyD Rmet_4122 546494 - 545466 - | integrase catalytic subunit TERM 381 546389 - 546418 + g 75 -7.7 -4.23781 | overlap 546384 TAGTGCTCTTGTCAC GCCCCAGGGCCCT GGCT ATGGCGCTGAGGC TTTGCTTTTGCTGCA Rmet_4123 546539 - 549610 + | heavy metal efflux pump CzcA TERM 382 549663 - 549689 + F 100 -17.3 -5.64421 | AGTACAATGGCAACC GGCCGGCATGC AACGC GCGTGCCGGCC TTTTTTGTTTGGAGT Rmet_4124 549712 - 550086 + | hypothetical protein TERM 383 550116 - 550147 + F 89 -7.2 -5.07486 | opp_overlap 550116 CTGCCACACCGGAAA CCCGCTCGATGACA TTTT TGTCATCTTGGGGG TTTTTGTTGGACATC TERM 384 550620 - 550608 - g 70 -2.6 -4.67353 | overlap 550610 TGATCGAGGGAAAAA CGGC GAAGT ACCG CGACGTTGTGGCCAT Rmet_4125 550235 - 550732 + | hypothetical protein Rmet_4126 550827 - 551459 + | nitrogen fixation protein NifQ, putative Rmet_4127 551862 - 551518 - | hypothetical protein TERM 385 551592 - 551612 + g 81 -16.1 -3.01712 | GGAAGCGGTCGTCGG GCGCGCGCG GCA CGCGCGTGC TCTTGCGGGCGGGCG TERM 386 552427 - 552470 + G 71 -9.5 -3.767 | GCCCAATGCGGCAGG GCTGGCG-GCAGGACTGGCCG ACGG TGGCCTGCCC-GCGCGTCAGC TTTACTGGGTACGTC TERM 387 552785 - 552757 - g 78 -13.7 -3.28924 | opp_overlap 552757 552754 CATCGTTTTTCACAA GCGGCGCGGCCCG GCA CGCGACACGCCGC TGCTGTTGCCGCTGG Rmet_4128 552077 - 553006 + | hypothetical protein TERM 388 554342 - 554303 - g 75 -9.8 -3.96892 | gap 1 AAGCGGCACGACAAA CGGCAGGACAAGCGGCGGC GCG GCC-CCGCCCGAACGGCCG CTATGGCTGCTGGAG Rmet_4129 553023 - 554606 + | hypothetical protein TERM 389 554912 - 554867 - g 79 -15.3 -3.03124 | gap 1 TGGGAGGCGGTAACA CG-CAGCGCCCGGCGACTGGCC GCG GGGCAGACGGCGGGCGATGTCG ACGAGATAGAGGAGC TERM 390 555552 - 555591 + G 72 -8.6 -4.07868 | overlap 555537 555553 TCCGCTCGCGCAAGC CGCTGGCCGATGTG CTGACCGCGATC CGCATCGGCCAGCC TTTGTCTGCGTGTGG dnaE2 554633 - 558094 + | error-prone DNA polymerase Rmet_4131 559026 - 558373 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Rmet_4132 560333 - 559200 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Rmet_4133 561330 - 560350 - | transketolase, central region Rmet_4134 562426 - 561323 - | dehydrogenase, E1 component Rmet_4135 563084 - 562614 - | hypothetical protein Rmet_4136 563265 - 564191 + | taurine catabolism dioxygenase TauD/TfdA Rmet_4137 564241 - 565266 + | putative periplasmic protein Rmet_4138 565268 - 566107 + | ABC transporter related Rmet_4139 566146 - 567024 + | binding-protein-dependent transport systems inner membrane component Rmet_4140 567109 - 567876 + | methyltransferase type 11 Rmet_4141 569136 - 567910 - | hypothetical protein TERM 391 569782 - 569840 + G 75 -10.1 -3.88787 | overlap 569767 569783 CGGCGATCTGCTGCC GCTCAATCGCG-GCGCCGGCGGCCGTGTG CTG CGCGCTTTCGCCGGCGCGCGCGGA-GAGA TTTATCAGCGTATCC TERM 392 569783 - 569839 + G 75 -13.6 -2.92951 | overlap 569767 569782 GGCGATCTGCTGCCG CTCAATCGCG-GCGCCGGCGGCCGTGTG CTG CGCGCTTTCGCCGGCGCGCGCGGA-GAG ATTTATCAGCGTATC Rmet_4142 569339 - 570115 + | IclR family transcriptional regulator TERM 393 571312 - 571356 + G 88 -17.8 -3.01712 | overlap 571349 GCATCGGCGTGGCCG AGCTGCGCGGCGGGCCCTCG AGCCG TGAGGGCCTGTGGCGCAGCC TGTTCGCCACGGCGG Rmet_4143 570267 - 571496 + | diguanylate cyclase Rmet_4144 572393 - 571539 - | citrate synthase Rmet_4145 573634 - 572390 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 394 573463 - 573477 + g 81 -12.8 -3.61764 | GCTGACGTGCGAGGT CGCCCG TGC CGGGCG TTTCCACCTTGATCA Rmet_4146 574646 - 573627 - | hypothetical protein Rmet_4147 575610 - 574963 - | hypothetical protein Rmet_4148 577648 - 575639 - | squalene cyclase TERM 395 577676 - 577699 + r 90 -19.6 -3.07816 | CACTTCTCTGTTCTG GGCACGCGGC AATG GCCGCGTGCC TTGGCTAAATACAAG Rmet_4149 578572 - 577724 - | squalene/phytoene synthase Rmet_4150 579252 - 578683 - | putative signal peptide protein TERM 396 579307 - 579282 - R 87 -16.9 -3.03034 | overlap 579255 579252 579286 AAAGCCCAGAAAGCA GAAAGCCCCGC CGGA GCGGGGCTTCC CAGGCAAGATAAACT TERM 397 579303 - 579286 - R 100 -14.1 -4.17701 | overlap 579282 CCCAGAAAGCAGAAA GCCCCGC CGGA GCGGGGC TTCCCAGGCAAGATA Rmet_4151 579540 - 579337 - | cold-shock DNA-binding protein family protein Rmet_4152 580510 - 579545 - | integrase catalytic subunit TERM 398 580690 - 580704 + r 95 -4.2 -5.65177 | overlap 580676 CGGCGCACATGCGAG CAGCCA TTT TGACTG TTTTTTTCTGGCTGT Rmet_4153 581986 - 580886 - | IS4 family transposase TERM 399 582755 - 582710 - H 100 -18.5 -3.5882 | GATAGTATTTTTAAA GCCATAATCCTCATCCATCGA AGCT TCAATGGATGAGGGTGATGGC CAGAACACGCAAGAC Rmet_4154 582742 - 583950 + | IS4 family transposase TERM 400 584642 - 584655 + G 78 -3.7 -4.7497 | overlap 584641 584640 584645 CGCCACTGTGGGAAC GCGGC TATC GCGGC TTTTTCCTCGATACG Rmet_4155 584239 - 587100 + | putative signal peptide protein TERM 401 591181 - 591156 - g 74 -10.3 -3.72695 | opp_overlap 591156 ACGTGCTGCATGAAA CCGCGTCCCGC AACG GCGGCACGCCG CTGACAGAAGTGGGT Rmet_4156 587114 - 591220 + | tetratricopeptide TPR_4 Rmet_4157 591272 - 591820 + | putative lipoprotein Rmet_4158 591844 - 593307 + | putative transmembrane protein Rmet_4159 593311 - 594297 + | putative transmembrane protein TERM 402 595743 - 595694 - g 83 -15 -3.25088 | gap 2, overlap 595697 GCTGAAACTGATCAA GGAGCCCGCGCGATGGCAGGCGGC CCAG GCCGCCGGC-ATCGCGCGGG-TGG AACGCTACTACACGC TERM 403 595741 - 595697 - g 100 -23.6 -2.80784 | gap 1, overlap 595694 GAAACTGATCAAGGA GCCCGCGCGATGGCAGGCGGC CCAG GCCGCCGGC-ATCGCGCGGGT GGAACGCTACTACAC Rmet_4160 594294 - 595883 + | glycosyl transferase, group 1 Rmet_4161 595885 - 597255 + | putative transmembrane protein Rmet_4162 597464 - 598162 + | two component transcriptional regulator Rmet_4163 598155 - 599825 + | peptidoglycan-binding LysM TERM 404 599850 - 599825 - g 71 -12.7 -3.01791 | gap 1, opp_overlap 599833, overlap 599828 ACTTGGCGCCCAATA GAACTGACCTGC GCA GC-GGTCAGTTC GACGCGGCCGAGCGG Rmet_4164 599812 - 602271 + | periplasmic sensor signal transduction histidine kinase TERM 405 602358 - 602386 + T 100 -11.6 -5.1101 | overlap 602347 602359 602360 CATCCGCGCGCCTTC CGGCCCGCGTCG TATCC CGACGCGGGCAA TTTTTTGCGTAGTCG TERM 406 602359 - 602385 + T 90 -15.1 -3.65883 | overlap 602347 602358 602360 ATCCGCGCGCCTTCC GGCCCGCGTCG TATCC CGACGCGGGCA ATTTTTTGCGTAGTC TERM 407 602360 - 602384 + T 86 -18.6 -2.78807 | overlap 602347 602359 602358 TCCGCGCGCCTTCCG GCCCGCGTCG TATCC CGACGCGGGC AATTTTTTGCGTAGT Rmet_4165 603391 - 602516 - | VacJ-like lipoprotein Rmet_4166 606162 - 603436 - | hypothetical protein TERM 408 604762 - 604733 - G 73 -9.1 -3.84451 | GGGTCGAAATCGAAA CGCAGGTGCGGCA GCAG CGGCGCGCCCGCG ATCAGCACCGCCAGC TERM 409 605020 - 604996 - G 89 -12.7 -4.05193 | opp_overlap 605012, overlap 604997 CAGGAAACAGAAGAA CGCCGCGGCGG TGG CAGCCGCGGCC AGCGTGAGCGGGCCT TERM 410 605019 - 604997 - G 81 -16.2 -3.02031 | opp_overlap 605012, overlap 604996 AGGAAACAGAAGAAC GCCGCGGCGG TGG CAGCCGCGGC CAGCGTGAGCGGGCC TERM 411 605146 - 605109 - G 70 -14.1 -2.52464 | CTGCTCGGTAACGCA CGCCGAACTGGATGCCG AAGT CGACACCCAGGCCGACG AAAAGCACCGCGAAC Rmet_4167 606344 - 606973 + | toluene tolerance TERM 412 607022 - 607054 + T 100 -27.9 -3.59979 | opp_overlap 607022 GAGTGGTCCGGAAAA GCAATCGGGGTCGGC AAT GCCGACCCCGATTGC TTTCACGTCACCAGA TERM 413 607054 - 607022 - T 100 -27.9 -4.07885 | opp_overlap 607022 GAGTGGTCCGGAAAA GCAATCGGGGTCGGC AAT GCCGACCCCGATTGC TTTCACGTCACCAGA Rmet_4168 608243 - 607077 - | radical SAM family protein ispH 609270 - 608272 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rmet_4170 609425 - 610501 + | NAD-dependent epimerase/dehydratase TERM 414 610551 - 610568 + T 76 -9.8 -3.75153 | ACGTTACGACCGTAC GGGCGC CTGCGA GCGCCC TTTCCATTGGCCGCC Rmet_4171 611681 - 610539 - | glycosyl transferase family protein Rmet_4172 612704 - 611688 - | hypothetical protein TERM 415 612820 - 612789 - R 100 -21.6 -3.6215 | overlap 612790 TCAAGGCAGTCGAAA TCGATCCGGCGGGC CATA GCCCGCCGGATCGT GATCGCCAATCGACC TERM 416 612819 - 612790 - R 100 -25.1 -2.76969 | overlap 612789 CAAGGCAGTCGAAAT CGATCCGGCGGGC CATA GCCCGCCGGATCG TGATCGCCAATCGAC Rmet_4173 613112 - 612837 - | hypothetical protein TERM 417 613154 - 613137 - R 78 -10.5 -3.90112 | opp_overlap 613136, overlap 613138 GTCCTTTGAAGGAAA CCCCGGC CCAG GCCGGGA GCGTTTGCCGGCGCG Rmet_4174 613420 - 613175 - | hypothetical protein Rmet_4175 613530 - 614756 + | N-acylglucosamine 2-epimerase TERM 418 614792 - 614768 - T 78 -13.5 -3.20435 | opp_overlap 614768 614788, overlap 614769 CTAAGCAGGCATCAA TCGACCCGCGC GGC GCGCAGGTCGC TCTTGCGAATCAGTT TERM 419 614791 - 614769 - T 83 -17 -2.5194 | opp_overlap 614768 614788, overlap 614768 TAAGCAGGCATCAAT CGACCCGCGC GGC GCGCAGGTCG CTCTTGCGAATCAGT Rmet_4176 615660 - 614764 - | LysR family transcriptional regulator Rmet_4177 615749 - 617158 + | EmrB/QacA family drug resistance transporter Rmet_4178 617337 - 617197 - | hypothetical protein Rmet_4179 617733 - 617359 - | hypothetical protein Rmet_4180 618876 - 618010 - | LysR family transcriptional regulator TERM 420 618847 - 618869 + g 71 -4.1 -4.564 | opp_overlap 618840 CACGAAAGCCTGGAC GGCATCC AAGTCGAGC GGGTGCC TTTTCATTTCCAATT Rmet_4181 618973 - 619353 + | 4-oxalocrotonate tautomerase TERM 421 619450 - 619478 + T 70 -10.3 -3.52652 | overlap 619451 619473 AGGAAGTTCGTTGAC CGCTGAGGGTC GGTCTGA GACCCTCAGCC TTCTGATTGCCTGCG TERM 422 619451 - 619477 + T 73 -13.8 -2.7127 | overlap 619450 619473 GGAAGTTCGTTGACC GCTGAGGGTC GGTCTGA GACCCTCAGC CTTCTGATTGCCTGC Rmet_4182 620290 - 619619 - | phospholipase/carboxylesterase Rmet_4183 620713 - 620417 - | hypothetical protein Rmet_4184 621085 - 620777 - | hypothetical protein Rmet_4185 621286 - 622359 + | methyl-accepting chemotaxis sensory transducer Rmet_4186 623246 - 622377 - | hypothetical protein TERM 423 623540 - 623555 + H 91 -4.6 -5.54264 | CCAGACAGTGACGCA GTACCG GAAA CGGTTC TTTTTTTAAGTCTTT Rmet_4187 623703 - 624200 + | hypothetical protein TERM 424 624242 - 624269 + F 100 -18.4 -3.79251 | overlap 624243 CGGTTGTCGGCTGAA GCCCGGCGCCCT CGAT AGGGCGCCGGGG TTTCATGGTGCGATA TERM 425 624243 - 624268 + F 100 -21.9 -2.87229 | overlap 624242 GGTTGTCGGCTGAAG CCCGGCGCCCT CGAT AGGGCGCCGGG GTTTCATGGTGCGAT TERM 426 624406 - 624420 + F 77 -11.4 -3.68569 | GGCCGCTGGTTGGCT CCGGGA AAA TCCCGG TTGTGTATCTATCTT Rmet_4188 624421 - 625056 + | TetR family transcriptional regulator TERM 427 625089 - 625119 + T 100 -13.3 -5.67967 | gap 1, opp_overlap 625089 625086, overlap 625090 CTGCAGGACACATCA T-CCGCCGGAGGGC ATCA GCCGTCCGGCGGTA TTTTTTTGTCCTGCT TERM 428 625118 - 625089 - T 77 -14.9 -2.71268 | opp_overlap 625089 625090, overlap 625086 CTGCAGGACACATCA TCCGCCGGAGGGC ATCA GCCGTCCGGCGGT ATTTTTTTGTCCTGC TERM 429 625090 - 625117 + T 100 -18.4 -4.47611 | opp_overlap 625089 625086, overlap 625089 TGCAGGACACATCAT CCGCCGGAGGGC ATCA GCCGTCCGGCGG TATTTTTTTGTCCTG Rmet_4189 625879 - 625103 - | alpha/beta fold family hydrolase Rmet_4190 626907 - 625876 - | hypothetical protein Rmet_4191 627867 - 626953 - | LysR family transcriptional regulator Rmet_4192 630294 - 628150 - | twin-arginine translocation pathway signal TERM 430 630613 - 630637 + H 90 -15 -3.55444 | TGCTGTCTTGCAGCG GCGCGTCGCG TGACT CGCGATGCGC TTTGCAGCGTAAGCA Rmet_4193 631021 - 631506 + | hypothetical protein Rmet_4194 632680 - 631532 - | alanine racemase-like protein TERM 431 632080 - 632129 + g 70 -13.6 -2.64616 | gap 3 GCTCGGCAGCCCGTG CGGCGGCGTC-A-CGAC-GCTCGGC CCA GCCGCGCAGATGCTGGACGCCGCCG TGGTATGCCTGCAGG TERM 432 632530 - 632574 + g 71 -13.4 -3.01712 | overlap 632533 CCTTGGCGTGAGGAC GCAGCTTGACGCCGGCCGCG TCGGC CGCGGCCTGCATCCGGCTGA TGTTGCGGGCGAAGA TERM 433 632533 - 632571 + g 71 -13.7 -2.73875 | overlap 632530 TGGCGTGAGGACGCA GCTTGACGCCGGCCGCG TCGGC CGCGGCCTGCATCCGGC TGATGTTGCGGGCGA TERM 434 633431 - 633473 + G 100 -27.2 -2.88861 | opp_overlap 633423, overlap 633433 CACTGAAGCCGTGAT CGCCAGGATCAGCACCCGTT TCA ACCGGGTGCTGATCCTGGTG TGTGTCGGCATGGTG TERM 435 633433 - 633471 + G 100 -26.2 -2.99471 | opp_overlap 633423, overlap 633431 CTGAAGCCGTGATCG CCAGGATCAGCACCCGTT TCA ACCGGGTGCTGATCCTGG TGTGTGTCGGCATGG Rmet_4195 632898 - 634445 + | methyl-accepting chemotaxis sensory transducer Rmet_4196 635088 - 634495 - | DSBA oxidoreductase Rmet_4197 636054 - 635158 - | short-chain dehydrogenase/reductase SDR Rmet_4198 636079 - 636822 + | PadR family transcriptional regulator TERM 436 637202 - 637222 + G 73 -12.5 -3.41693 | overlap 637211 GCCGGGCCAGTATCT CGGCGTGGG CGG CCCACGCGG TTCGTTCGTGATCCC Rmet_4199 636819 - 637631 + | FAD-binding 9, siderophore-interacting Rmet_4200 637731 - 638132 + | hypothetical protein Rmet_4201 638276 - 639493 + | aminotransferase Rmet_4202 640449 - 639562 - | LysR family transcriptional regulator TERM 437 641155 - 641141 - g 72 -8.5 -4.0371 | CACGTTCCATACAAA GGCGG CGCGC CCGCC ATTACCGACCTGATC Rmet_4203 640550 - 641557 + | hypothetical protein TERM 438 641697 - 641715 + G 100 -8.8 -4.86731 | CTTCCATCCTGGTGG TCAGCGCC CAC GCCGCTGA TTTTGTTTGGCGCGC TERM 439 641914 - 641876 - g 72 -13 -3.14132 | opp_overlap 641876 641873 GCGCGTCGCGAGGAA GCCGAGCGCGCTGCCGAG ATC CTGGGCGGCACGCTCGAA TGCTTCGATCTGGGC TERM 440 642340 - 642356 + G 71 -7.9 -4.08394 | opp_overlap 642333 CAAGATTACCCATGG TGAGGGC TAT GCCCGCA TTTTCCCGCAAGTCT Rmet_4204 641651 - 642388 + | LmbE-like protein Rmet_4205 642385 - 643098 + | hypothetical protein Rmet_4206 643210 - 644160 + | LysR family transcriptional regulator TERM 441 644675 - 644646 - g 75 -7.7 -4.23781 | overlap 644641 TGCAGCAAAAGCAAA GCCTCAGCGCCAT AGCC AGGGCCCTGGGGC GTGACAAGAGCACTA Rmet_4207 644570 - 645598 + | integrase catalytic subunit Rmet_4208 645856 - 645587 - | hypothetical protein Rmet_4209 646230 - 645853 - | hypothetical protein Rmet_4210 646549 - 647982 + | tricarballylate dehydrogenase TERM 442 648294 - 648309 + G 81 -11.8 -3.85698 | GCGACTACGCTTTCC CCGCCG CGCT CGGCGG TTTGTACCGGCGCGC TERM 443 649134 - 649105 - g 72 -6.4 -4.30441 | gap 2, overlap 649106 GTACAACATCGAAAA GCGC-CGGC-CGAG CGAT CTCGCGCTGGGCGC CGACTAAGACATCGA Rmet_4211 647969 - 649141 + | citrate utilization protein B Rmet_4212 649184 - 649972 + | class II aldolase/adducin-like protein TERM 444 650059 - 650014 - f 95 -11.2 -4.45738 | gap 2, opp_overlap 650026 CATCTGAAGAAGAAA GCCTGAACGCCATCCAACGCCC GCAG AGGCGT-GGATGGCTTGC-GGC GAACCGGCGGGATCC Rmet_4213 650173 - 651153 + | hypothetical protein Rmet_4214 651163 - 652188 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 445 652264 - 652230 - f 72 -11.5 -3.27704 | gap 1, opp_overlap 652263, overlap 652217 652225 AGGCTGCAAACTGAA GCGG-GAAGTTGCGGA GTTT TCAGCAACCTCGCCGC GGCGTCGACATGCAC Rmet_4215 652302 - 652754 + | response regulator receiver domain-containing protein Rmet_4216 654557 - 652761 - | dihydrolipoamide dehydrogenase TERM 446 653143 - 653180 + g 78 -14.2 -3.21595 | gap 1, overlap 653154 653169 TTGTAGTCGATGTGT GGCTTC-TGGCCGTCGA TGACC TCGGCGGCCATGACGCC TTCGTCCTCGGCCTT TERM 447 653671 - 653683 + g 78 -4.1 -4.77165 | GACAGCGCGCCCTCG TTGTC GGA GACGA TTTTGTTGTCGACCG TERM 448 654275 - 654311 + g 71 -10.8 -3.61654 | gap 1 CTGGGGCGGATGCCG GCGCT-GCAGCGGCCAC GGGT GAGGCTGCTGCGACCGC TTTCCCCTCGGTGTC Rmet_4217 654759 - 655406 + | hypothetical protein Rmet_4218 656058 - 655420 - | lysine exporter protein LysE/YggA TERM 449 656149 - 656133 - H 70 -5.1 -4.51197 | opp_overlap 656132 656133 656142, overlap 656142 GATAACTAAGTAAAA CGGATTA TAC TGATCCG ATTGTTCAGATTTTC Rmet_4219 656172 - 657023 + | LysR family transcriptional regulator Rmet_4220 657201 - 658097 + | alpha/beta hydrolase fold TERM 450 658754 - 658714 - f 78 -10.4 -3.91541 | gap 1, overlap 658715 CCACGAAATCAATAA GGCGTGAA-GCGTTCCCGC TCAA GCGGGAGCGCGTCCACACG CCATGACCTGGCCAG TERM 451 658753 - 658715 - f 75 -13.9 -2.94202 | gap 1, overlap 658714 CACGAAATCAATAAG GCGTGAA-GCGTTCCCGC TCAA GCGGGAGCGCGTCCACAC GCCATGACCTGGCCA TERM 452 659488 - 659472 - g 70 -13.7 -2.53343 | opp_overlap 659485, overlap 659471 ACATTGACCACGAAC CGCGACG CCA CGTCGCG TCGGGCCACGGTGGC Rmet_4221 658812 - 659900 + | porin Rmet_4222 660206 - 661006 + | IclR family transcriptional regulator Rmet_4223 661424 - 662377 + | hypothetical protein Rmet_4224 662374 - 663528 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4225 663525 - 664328 + | enoyl-CoA hydratase TERM 453 664997 - 665017 + G 72 -3.2 -4.65895 | gap 1 ATTCAACGTTCAGCA CGCGG-CGG ACGA TCGATCGCG TTTTTGCGTCGAGAC Rmet_4226 664357 - 665292 + | LysR family transcriptional regulator Rmet_4227 665816 - 665493 - | hypothetical protein Rmet_4228 667335 - 666235 - | IS4 family transposase TERM 454 667423 - 667454 + r 89 -6.5 -5.0916 | gap 1, overlap 667423 667424 TTCAGCAGCCTGTTA G-GCGTCAGTCGGC TCCCC GCGGGCTGGCGCAC TTTTTCTCTTCGAAC Rmet_4229 668240 - 667593 - | two component LuxR family transcriptional regulator TERM 455 668563 - 668581 + r 86 -14.6 -3.40382 | TGCCGAGGCCCCGGA GCCCAGGA ATC TCCTGGGC TTATCCGATTTAGTC Rmet_4230 669744 - 668605 - | porin Rmet_4231 670211 - 669897 - | hypothetical protein TERM 456 670025 - 670046 + g 75 -7.9 -4.20368 | opp_overlap 670025 GTGATGGATTCATAA GGGGCTGCT TTCG GGGAGCCCC TTTCTCTTGCAGTGG Rmet_4232 670270 - 671214 + | hypothetical protein Rmet_4233 671369 - 672067 + | dimethylmenaquinone methyltransferase TERM 457 672528 - 672562 + G 72 -12.8 -3.12327 | opp_overlap 672533 672534, overlap 672526 672533 TATCGTCGGTCTTGG CGAAATCGGTCGCCGC GTA GCGGTGACCGGTGTGG TGTTGGGTATGCGCG TERM 458 672533 - 672557 + G 81 -15.7 -2.92789 | opp_overlap 672533 672534, overlap 672528 672526 TCGGTCTTGGCGAAA TCGGTCGCCGC GTA GCGGTGACCGG TGTGGTGTTGGGTAT TERM 459 672557 - 672533 - g 72 -11.3 -3.53012 | opp_overlap 672533 672528 672526, overlap 672534 TCGGTCTTGGCGAAA TCGGTCGCCGC GTA GCGGTGACCGG TGTGGTGTTGGGTAT TERM 460 672556 - 672534 - g 75 -14.8 -2.71712 | opp_overlap 672533 672528 672526, overlap 672533 CGGTCTTGGCGAAAT CGGTCGCCGC GTA GCGGTGACCG GTGTGGTGTTGGGTA Rmet_4234 672070 - 673008 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_4235 673266 - 673913 + | two component LuxR family transcriptional regulator Rmet_4236 674240 - 674614 + | hypothetical protein TERM 461 674988 - 675012 + T 100 -11.4 -5.81412 | CCGAAATTCCCGCAC CCCAAGCCGC TCCCC GCGACTTGGG TTTTTTTTCCCTCCA Rmet_4237 676338 - 675277 - | diguanylate phosphodiesterase TERM 462 675533 - 675510 - G 71 -13.2 -3.01712 | GCTGCTCCTCGAACA TGAGCAGGCA AGCC TGCCTGCCCA GCGACGTACTCGGAT TERM 463 675760 - 675744 - G 78 -2.9 -4.91109 | opp_overlap 675744, overlap 675745 GCGTCAGTAGAAAAA TGAAACG CAG CGCTTCG GTCTTGTCACCGTCA Rmet_4238 676814 - 676335 - | hypothetical protein TERM 464 677058 - 677082 + r 77 -14.3 -2.74012 | opp_overlap 677066 677067 ATCTGGACGGCGCAG CCCGGAAACGG AAG CCGTTTCCAGG TCGTTGCAATGGTCC TERM 465 677583 - 677555 - R 76 -8.9 -4.08216 | overlap 677556 CGATGCTCGTCAAAA CGTCCGCGATC CCTCAAC AATCGCGGACA AGTGATCAATCGAAC Rmet_4239 678749 - 677616 - | porin TERM 466 678723 - 678713 - G 75 -4 -4.62441 | GCTTATACAAACAAA CATT GCG AATG GATTGACTTGTTAAG Rmet_4240 681555 - 678901 - | aconitase Rmet_4241 681739 - 682611 + | alpha/beta hydrolase fold TERM 467 682780 - 682799 + GF 70 -4.9 -4.36914 | overlap 682781 TTGATCGTGCCTTCG GCCGCTG GAGGTG CAGCGGA TTTTGTCGCGCGGAC Rmet_4242 682645 - 683637 + | hypothetical protein Rmet_4243 683604 - 684521 + | Crp/FNR family transcriptional regulator Rmet_4244 684601 - 685497 + | LysR family transcriptional regulator Rmet_4245 685829 - 686263 + | hypothetical protein TERM 468 687360 - 687322 - g 87 -14.7 -3.5764 | gap 1, overlap 687306 AAGCTGATCGGCAAA CGCGCTGAGCTTGAAGAG GCGA CTCG-CAAGCTCAACGCG CTTAAGGAGATTGCG Rmet_4247 686761 - 687921 + | hypothetical protein Rmet_4248 688014 - 688421 + | hypothetical protein Rmet_4249 689119 - 688862 - | hypothetical protein Rmet_4250 689558 - 690085 + | fimbrial protein Rmet_4251 690157 - 690909 + | pili assembly chaperone TERM 469 691643 - 691669 + G 75 -7.3 -4.30576 | gap 2, overlap 691638 691636 TTACCTGGGTCTGGA CGCC-GGCG-TGA ACA TCGGCGCCTGGCG TTTTCATCATCGGGG Rmet_4252 691023 - 693575 + | fimbrial biogenesis outer membrane usher protein TERM 470 694031 - 694052 + G 72 -11.6 -3.55548 | opp_overlap 694030, overlap 694042 CTACGGTGTACCAAT GGTCCGGT AGCGCC ACCGGACC TTTCAGCGGCTATTG Rmet_4253 693640 - 694650 + | fimbrial protein TERM 471 694803 - 694771 - f 70 -9.8 -3.55071 | CGATAGTCGGCCAAA GGTGGCCTGCATCG CGCGC CGATACAGCCCGCC GCCAGCCAACATAAC TERM 472 695636 - 695650 + G 82 -7.1 -4.65895 | CGCGACGCCGACACT GCGCT GCACA AGCGC TTTTTCGGTGACGGC Rmet_4254 694898 - 696943 + | periplasmic sensor signal transduction histidine kinase TERM 473 697409 - 697427 + G 71 -8 -4.08216 | TGGCGAGACTGCCGA GCGCGCGC GTT GCCTGCGC TTTTCCGAGGCCTAC TERM 474 701243 - 701259 + G 71 -10.1 -3.68351 | GGGCAAGTGGTGTCA TCGTGCC GGT GGCGCGA TTTCGGTGATGGAGC Rmet_4255 697161 - 701417 + | PAS/PAC sensor hybrid histidine kinase Rmet_4256 701795 - 701574 - | putative transcriptional regulator Rmet_4257 701898 - 702590 + | general substrate transporter TERM 475 702672 - 702690 + GT 77 -5.2 -4.60041 | overlap 702673 TCGCCCGAGCCTCGC AGCGAGCA GCC TGTTCGCG TTTTTCAGCATCGGT Rmet_4259 703142 - 702768 - | isochorismatase hydrolase Rmet_4258 702643 - 702831 + | hypothetical protein Rmet_4260 704026 - 703145 - | Pirin-like protein Rmet_4261 705122 - 704211 - | LysR family transcriptional regulator Rmet_4262 705208 - 706260 + | LysR family transcriptional regulator Rmet_4263 708947 - 706269 - | 2-oxoacid dehydrogenase subunit E1 TERM 476 709111 - 709090 - g 74 -11.5 -3.64703 | overlap 709104 TTCGGCTCAGGGAAA CACCACCCC ATAA GGGGCGGCG CTCTGGCATTCGATG Rmet_4264 709069 - 709347 + | hypothetical protein TERM 477 709462 - 709479 + F 84 -5.5 -4.99645 | opp_overlap 709462, overlap 709457 709464 TGCAATATATCACAA CCGTACC GTAT GGTACTG TTTTGTTTGTGGGGT Rmet_4265 709561 - 710247 + | TetR family transcriptional regulator Rmet_4266 710552 - 710253 - | antibiotic biosynthesis monooxygenase Rmet_4267 710786 - 711427 + | isochorismatase hydrolase TERM 478 711526 - 711544 + F 100 -6.7 -6.09133 | overlap 711510 CGAACAATGCCCTTC GCCTGTT TCTTT GACAGGC TTTTTTTTTAACATG TERM 479 711651 - 711620 - f 86 -18.2 -2.79302 | overlap 711636 AGCAGTTCTAGTATA TGCGCTATACGCAA AGCG TTGCGCATAGCGCA AAAAAAGGAGGCAGG TERM 480 711709 - 711694 - g 77 -4.6 -4.60797 | overlap 711695 711696 TCCCCAGATACAAAA CCGCCG GCTA CGGCAA TCGCCTTTGTGGATA TERM 481 712189 - 712240 + G 72 -13.2 -3.04715 | overlap 712200 CGAGAATTGGGTTTG GCCGGCAGGCA-TGTGGCGGCA-CTG GAGG CGGTTGCCGCCGCAGTGCC--CCGGC ATTTTCCCCGCCCTA TERM 482 712200 - 712241 + G 81 -11.5 -4.08394 | gap 1, overlap 712189 TTTGGCCGGCAGGCA TGTGGCGGCACTGGAGGCGG TTG CCGCCGC-AGTGCCCCGGCA TTTTCCCCGCCCTAT Rmet_4268 711667 - 712464 + | citrate synthase TERM 483 712854 - 712906 + G 75 -14.2 -2.91912 | opp_overlap 712864 TGTGGGCTGATCTGT TCGCCGAACACGCT-CGACACGGCCG CGG CCGTCGTGTCGCAGCTTGG-CGGCGA TGTCTGGCTGCGTGC TERM 484 713301 - 713327 + G 89 -18 -3.14132 | GCGGCAGCAGGTAGC ATCCTCGCGCGG CGT CCGCGCGAGGAG TTCGTGCCCGGCCAC Rmet_4269 712461 - 714080 + | AMP-dependent synthetase and ligase Rmet_4270 714138 - 714971 + | intradiol ring-cleavage dioxygenase Rmet_4271 715822 - 714968 - | IclR family transcriptional regulator TERM 485 715595 - 715578 - G 70 -14.1 -2.53715 | overlap 715577 GGCAGCAGCAGGAAG CGGCGCC CGTT GGCGCCG ACATAGCCGAGCGAT TERM 486 715844 - 715855 + H 76 -7.2 -4.56597 | overlap 715832 ATTTTATCCGCACTT GGGC GGAT GCCC TTTTTACGAACGAGA Rmet_4272 715941 - 716651 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4273 716690 - 718123 + | isopropylmalate isomerase large subunit Rmet_4274 718120 - 718758 + | isopropylmalate isomerase small subunit TERM 487 718869 - 718887 + G 76 -9.5 -4.15565 | CTGCGATCCTTCTCT CGTCCCG CTGGA CGGGGCG TTTTGCAATGCTCGG TERM 488 719825 - 719805 - g 72 -9 -4.13282 | gap 1, overlap 719808 ACCAGACCCGGAAAA CCA-CGCGG ATCG CCGCGCTGG CCGGTCTAAAGAACT Rmet_4275 718817 - 719842 + | hypothetical protein Rmet_4276 720787 - 719894 - | secretion protein HlyD Rmet_4277 721011 - 720787 - | hypothetical protein Rmet_4278 722459 - 721008 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_4279 724653 - 722467 - | fusaric acid resistance protein region Rmet_4280 725048 - 724662 - | DoxX Rmet_4281 726735 - 725701 - | zinc-binding alcohol dehydrogenase TERM 489 725882 - 725853 - G 71 -4.3 -4.58283 | gap 1, overlap 725855 725857 GAATGTGCGGAAAAA CAG-ATTGTTCGAG ATC CTCGATCAACACCG CCTTTTCCTCGTGTG Rmet_4282 726891 - 727757 + | LysR family transcriptional regulator Rmet_4283 728918 - 728442 - | hypothetical protein Rmet_4284 729234 - 729091 - | entericidin EcnAB TERM 490 729519 - 729482 - R 78 -14.1 -3.19653 | opp_overlap 729494, overlap 729456 CGAGAACCTTAGGAA CACCTGCGGCTATCGCA GCGC CGCGAGAGGCGCAGGCG CAGGCGCAGGCGCCG TERM 491 729494 - 729547 + r 88 -19.6 -2.86164 | gap 2, opp_overlap 729456 729482 GAACACCTGCGGCTA TCGCAGCGCCGCGAGAGGCGCAGGCG CAGG CGCAGGCGCCG-T-GCGGCGCTGCGA TATGGTGCTTCAAAG Rmet_4285 730184 - 729771 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 492 731087 - 731128 + G 74 -12.9 -3.29263 | overlap 731088 GATTCGAGGTGGTGG GCTTCTACGGGGTGCTGGC ACCG GCCGGCACCCCGAAGGACA TTGTCGACAAGCTGT TERM 493 731088 - 731127 + G 81 -16.4 -2.57344 | overlap 731087 ATTCGAGGTGGTGGG CTTCTACGGGGTGCTGGC ACCG GCCGGCACCCCGAAGGAC ATTGTCGACAAGCTG Rmet_4286 730249 - 731310 + | hypothetical protein Rmet_4287 731713 - 731429 - | rare lipoprotein A TERM 494 732271 - 732305 + r 76 -12.1 -3.29144 | gap 1, opp_overlap 732266 CCTCACTCAACTGGC TGCGCCGCACGAGCGC CGCT GCGCAC-TGCGGGGCA TTCTGGCAGCCATGC Rmet_4288 733125 - 732262 - | short chain dehydrogenase TERM 495 733275 - 733251 - R 84 -5.5 -4.88407 | overlap 733252 733259 733260 CGATTCAAGCAAAAA GCGCCAAACGC CTC GCGAGTGGCGT CAAGGCATGGTCCCC Rmet_4289 733969 - 733298 - | nucleoside-diphosphate-sugar epimerase Rmet_4290 734993 - 733983 - | AraC family transcriptional regulator TERM 496 734488 - 734467 - G 74 -11.5 -3.56366 | AAGAACTTCTCGAAA CGCCGGACG TAGG CGTTCGGCG GCAGTTGGGGAAGTA Rmet_4291 736218 - 735331 - | 2,3-dimethylmalate lyase TERM 497 736490 - 736516 + G 73 -5.8 -4.35604 | gap 1, opp_overlap 736508 GCTGTGTGAGACCGT CGCGCCTCGCT ACAACG AGCT-GGCGCG TTTCTTCTCGATTCG Rmet_4292 736401 - 738338 + | propionate catabolism, transcriptional regulator PrpR TERM 498 738363 - 738343 - T 74 -6.8 -4.29227 | TGAAGGAGTAAGAAA GAAGCTGC GAATG GCCGCTTC AGGAGCCAGGCAACG TERM 499 739493 - 739513 + T 81 -13.9 -3.30124 | opp_overlap 739485 739486 GCGGAAATCCGTCGC GGGCCGACG ATC CGCCGGCCC TTGTGCACCGTGGGA TERM 500 739725 - 739703 - T 82 -9.1 -4.30719 | opp_overlap 739703 739698 GCGCCTCAGAAGAAA TGCCCCATC AGTAG GCTGGGGCA TTTGCATTTCTCTCA TERM 501 739703 - 739725 + T 73 -9.1 -3.91402 | opp_overlap 739703, overlap 739698 GCGCCTCAGAAGAAA TGCCCCATC AGTAG GCTGGGGCA TTTGCATTTCTCTCA Rmet_4293 740780 - 739854 - | zinc-binding alcohol dehydrogenase Rmet_4294 741208 - 740777 - | hypothetical protein Rmet_4295 741657 - 741235 - | DoxX TERM 502 742180 - 742190 + G 72 -8.2 -4.03234 | GGCGTTTCCTCACAC GCCG CTG CGGC TTTATGTCGAGGCAC Rmet_4296 741809 - 742723 + | LysR family transcriptional regulator Rmet_4297 744088 - 742913 - | hypothetical protein TERM 503 743933 - 743915 - G 70 -8.1 -4.05026 | CGCAAAGGCAAAGAA CAGCCCA TCCAC CGGGCTG GCGCGCACGTCGTCA Rmet_4298 744752 - 745048 + | hypothetical protein Rmet_4299 746633 - 745275 - | C4-dicarboxylate transporter DctA Rmet_4300 747993 - 746749 - | respiratory-chain NADH dehydrogenase domain-containing protein Rmet_4301 749662 - 748013 - | fumarate reductase/succinate dehydrogenase flavoprotein-like protein TERM 504 749050 - 749072 + g 76 -6.1 -4.56597 | opp_overlap 749048 749047, overlap 749049 GGTAGGAAAGAATGC GCGCGGCCG AGGCG CCGCCGGGC TTTTTGCGCAGAAGG Rmet_4302 750315 - 749677 - | ferredoxin Rmet_4303 750706 - 752211 + | anion transporter Rmet_4304 752591 - 752307 - | hypothetical protein Rmet_4305 753208 - 752864 - | hypothetical protein Rmet_4306 754758 - 753517 - | major facilitator transporter Rmet_4307 755439 - 754837 - | TetR family transcriptional regulator Rmet_4308 756555 - 755590 - | AraC family transcriptional regulator Rmet_4309 756797 - 757048 + | hypothetical protein TERM 505 757338 - 757314 - f 70 -4.1 -4.63932 | CATTGCTGAAGAAAA CGGGCGCGC GATGCAG GTGCGGCCG GATCACTCAAACCAG TERM 506 758325 - 758354 + G 71 -14.3 -2.77899 | gap 1, overlap 758323 CGATGAACCTTGGGC GGTCCGCCGGACAC AAC GTGGCCG-CGGACC TGGTTGGTGACAAAC Rmet_4310 757376 - 758584 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 507 758593 - 758619 + T 100 -21 -3.71848 | opp_overlap 758593 GGCGTAACGAGTAAA CGAGGCAAGACG GAT CGTCTTGCCTCG TTGTTCCTGAAGGAG TERM 508 758619 - 758593 - T 100 -21 -3.84246 | opp_overlap 758593 GGCGTAACGAGTAAA CGAGGCAAGACG GAT CGTCTTGCCTCG TTGTTCCTGAAGGAG TERM 509 758903 - 758924 + T 100 -14.5 -5.24531 | opp_overlap 758903 CCTGTCAAATGAGAA TCGCCTTCC ATCT GGAAGGCGA TTTTTTATGCACGAT TERM 510 758924 - 758903 - T 90 -14.5 -3.60151 | opp_overlap 758903 CCTGTCAAATGAGAA TCGCCTTCC ATCT GGAAGGCGA TTTTTTATGCACGAT Rmet_4312 759504 - 758929 - | BadM/Rrf2 family transcriptional regulator Rmet_4313 761189 - 759630 - | EmrB/QacA family drug resistance transporter TERM 511 760732 - 760765 + g 71 -3.7 -4.54821 | gap 1 ATTGGTCCCACGGTA GCGGTCA-TCGCCCAC AAC GCGAGTGCCTGACCGC TTTTCTCCTTGGGAT Rmet_4314 762493 - 761222 - | secretion protein HlyD Rmet_4315 764037 - 762523 - | RND efflux system, outer membrane lipoprotein, NodT TERM 512 764230 - 764196 - R 79 -7.9 -4.5442 | gap 1, overlap 764197 764200 GCGCGAACGACAAAA GCGA-TGACAGGGCGA CGCG TCGCCCTGTCAATCTG GGGTGGATTTCAGGA TERM 513 764229 - 764197 - R 72 -11.4 -3.3217 | gap 1, overlap 764196 764200 CGCGAACGACAAAAG CGA-TGACAGGGCGA CGCG TCGCCCTGTCAATCT GGGGTGGATTTCAGG TERM 514 764225 - 764200 - R 86 -17.7 -2.82606 | overlap 764197 764196 GAACGACAAAAGCGA TGACAGGGCGA CGCG TCGCCCTGTCA ATCTGGGGTGGATTT Rmet_4316 764747 - 764307 - | cupin 2, barrel Rmet_4317 765193 - 764756 - | alkylhydroperoxidase AhpD core Rmet_4318 766839 - 765325 - | GntR family transcriptional regulator TERM 515 766945 - 766919 - H 70 -5.1 -4.57474 | gap 1, overlap 766920 766921 GCAATCGATACAAAA TTGGCCGAAGCG AGGG CGCTCCGGC-AC GGAACCTGGATATGC Rmet_4319 766962 - 767681 + | short-chain dehydrogenase/reductase SDR TERM 516 768611 - 768597 - g 72 -7 -4.21275 | overlap 768586 CGAAGCCAGCCAAAA CCGAGG GTG CCGCGG TGCTGGATCGCATTC TERM 517 768832 - 768864 + G 86 -9.2 -4.58663 | gap 2, overlap 768814 768813 GACCGTCGCCGAGAT TGGGCGGCG--GGCAG GGT TTGCCGATGCCGCCCA TTTTTCCCGGGTGAT Rmet_4320 767963 - 768964 + | AraC family transcriptional regulator Rmet_4321 768968 - 769939 + | hypothetical protein TERM 518 771544 - 771575 + G 75 -7.1 -4.34263 | overlap 771538 TCTGAAGGCGCGGTC GGTGGGCGGCACG ATGATG CTGGCCGGCCACC TTTGTCTTGTTGCGA Rmet_4322 770096 - 771685 + | cytochrome c oxidase, subunit I TERM 519 772184 - 772138 - g 70 -13.7 -2.57344 | opp_overlap 772142, overlap 772137 GATGCCGGCGAGAAG GCCATCACCTTGCCACCAGGC TACGC GCCAGTTGGCAAGGTGATTGT TCCCACTGCGGCGGC TERM 520 772142 - 772180 + G 93 -17.5 -3.63515 | opp_overlap 772138 772137 CCGGCGAGAAGGCCA TCACCTTGCCACCAGGC TACGC GCCAGTTGGCAAGGTGA TTGTTCCCACTGCGG Rmet_4323 771682 - 772281 + | cytochrome C oxidase, mono-heme subunit/FixO Rmet_4324 772297 - 772905 + | cytochrome c, class I Rmet_4325 772973 - 773521 + | putative transmembrane protein Rmet_4326 773518 - 774093 + | putative transmembrane protein Rmet_4327 774522 - 774100 - | hypothetical protein Rmet_4328 775540 - 774566 - | alpha/beta hydrolase fold Rmet_4329 775625 - 776068 + | BadM/Rrf2 family transcriptional regulator Rmet_4330 776317 - 777363 + | twin-arginine translocation pathway signal Rmet_4331 777370 - 778140 + | ABC transporter related Rmet_4332 778137 - 779033 + | binding-protein-dependent transport systems inner membrane component Rmet_4333 779037 - 780710 + | amidohydrolase 3 Rmet_4334 781132 - 780797 - | 4Fe-4S ferredoxin, iron-sulfur binding Rmet_4335 782778 - 781129 - | fumarate reductase/succinate dehydrogenase flavoprotein-like protein Rmet_4336 783930 - 782899 - | fatty acid desaturase Rmet_4337 784145 - 785152 + | hypothetical protein Rmet_4338 785216 - 786865 + | rhodanese-like protein Rmet_4339 786978 - 787223 + | histidine kinase TERM 521 787520 - 787540 + G 77 -12.5 -3.56092 | opp_overlap 787516 787514 GGACAACAAGACCGT GGCTGGCCG CGG CGGCAAGCC TTTCACCCGTCGTAA TERM 522 788771 - 788750 - g 82 -6.5 -4.63218 | gap 1, overlap 788752 GTCCCGCGAAGAAAA GATGGCGGCG CTG CGCCGCTA-C ATGCCCGAGGCGAAG TERM 523 788770 - 788752 - g 75 -10.2 -3.93367 | overlap 788750 CCCGCGAAGAAAAGA TGGCGGCG CTG CGCCGCTA CATGCCCGAGGCGAA Rmet_4340 787494 - 789209 + | malate:quinone oxidoreductase TERM 524 789445 - 789463 + T 71 -6.6 -4.25873 | CTTTTGCTGCGCGAC CCGACGGG AAT CTCGTCAG TATTTTTTCTCGCCC TERM 525 789590 - 789570 - T 100 -14 -5.06414 | TCCCCCCAAGAAAAA GGCCCTCC ACGAG GGAGGGCC AATACTGCCCAGTGT Rmet_4341 790603 - 789641 - | hypothetical protein TERM 526 790263 - 790243 - G 77 -12.6 -3.68261 | overlap 790236 CCAGAACATTCGAAA CGGTTGCG AACAA CGCAACCG GAACCAGCTTCTTGG Rmet_4342 792152 - 790650 - | argininosuccinate lyase TERM 527 792308 - 792294 - R 74 -11.4 -3.54459 | opp_overlap 792293 792292 792296 TGAACCTTGGCGAAA GACCGC GGC GCGGTC ACTTCTGCTAGTCCG Rmet_4343 793342 - 792437 - | LysR family transcriptional regulator Rmet_4344 793592 - 794707 + | porin TERM 528 794844 - 794810 - g 75 -6.5 -4.44046 | gap 2, opp_overlap 794823, overlap 794814 CGCATGGCAAAGAAA TCGATTCGGGTATCGCA TGT CGCGATACCCGG--CGA CCTGAGTGTTCTCAA Rmet_4345 794798 - 795169 + | hypothetical protein Rmet_4346 796798 - 796268 - | hypothetical protein Rmet_4347 797594 - 797085 - | alkylhydroperoxidase AhpD core TERM 529 797203 - 797216 + g 73 -9.5 -3.83026 | overlap 797194 GCATCGGTCGCACCA GCGGC TTTT GCCGC TTTAGTGTGAGCGGA Rmet_4348 798005 - 797616 - | hypothetical protein Rmet_4349 798109 - 798459 + | hypothetical protein Rmet_4350 800044 - 799799 - | UvrD/REP helicase family protein Rmet_4351 800167 - 800352 + | hypothetical protein TERM 530 800427 - 800408 - T 73 -10.6 -3.6502 | TAGTTGGTACCGAAA CGCGGCGC ATTG GTGCCGCG TGGGAATGAGAGCCG TERM 531 800479 - 800439 - T 100 -32.8 -2.90075 | opp_overlap 800439 CGCGTGGGAATGAGA GCCGACCCGCCACACACG TGCAT CGTGTGTGGCGGGTCGGC TTTTTTGTGCGCGAA TERM 532 800439 - 800479 + T 100 -32.8 -5.24129 | opp_overlap 800439 CGCGTGGGAATGAGA GCCGACCCGCCACACACG TGCAT CGTGTGTGGCGGGTCGGC TTTTTTGTGCGCGAA Rmet_4352 800872 - 800495 - | hypothetical protein TERM 533 800930 - 800905 - R 100 -10.3 -5.1287 | overlap 800906 800907 GGCACAGCGAAAAAA CGGGCGCGGCA ACGT TGCCGCGCCTT GCGCTGACATCGACA TERM 534 800929 - 800906 - R 88 -13.8 -3.66999 | overlap 800905 800907 GCACAGCGAAAAAAC GGGCGCGGCA ACGT TGCCGCGCCT TGCGCTGACATCGAC TERM 535 800928 - 800907 - R 84 -17.3 -2.79476 | overlap 800906 800905 CACAGCGAAAAAACG GGCGCGGCA ACGT TGCCGCGCC TTGCGCTGACATCGA TERM 536 801011 - 800993 - R 83 -2.3 -5.2189 | overlap 800994 CCAATGATGAAAAAA CCGCCAC GGAGG GTGACGT GAGGCCAGAAGAGAG TERM 537 801148 - 801113 - R 100 -26.4 -4.09685 | opp_overlap 801113 801116, overlap 801116 TTCGAGGGCGTAAAA CAATAGCCCCGTCACG GTTT CGTGACGGGGCTATTG TTCTTGATCTTGCCG TERM 538 801113 - 801148 + r 100 -26.4 -3.82084 | opp_overlap 801113 801116, overlap 801116 TTCGAGGGCGTAAAA CAATAGCCCCGTCACG GTTT CGTGACGGGGCTATTG TTCTTGATCTTGCCG TERM 539 801116 - 801145 + r 100 -22.3 -4.03167 | opp_overlap 801113 801116, overlap 801113 GAGGGCGTAAAACAA TAGCCCCGTCACG GTTT CGTGACGGGGCTA TTGTTCTTGATCTTG TERM 540 801145 - 801116 - R 100 -22.3 -4.17762 | opp_overlap 801116 801113, overlap 801113 GAGGGCGTAAAACAA TAGCCCCGTCACG GTTT CGTGACGGGGCTA TTGTTCTTGATCTTG Rmet_4353 802060 - 801188 - | GntR family transcriptional regulator Rmet_4354 802979 - 802128 - | LuxR family transcriptional regulator TERM 541 802870 - 802857 - G 100 -3.7 -5.72207 | opp_overlap 802860, overlap 802858 802859 TCGAAACGAAAAAAA GCCGG CCTT CAGGC CTAATTTCCAGCCTT Rmet_4355 803877 - 803116 - | integral membrane protein TerC Rmet_4356 804073 - 805080 + | 2-dehydropantoate 2-reductase TERM 542 805243 - 805211 - f 79 -12.7 -3.55761 | overlap 805230 805231 GATTGATGCGCGAAA CGCATGGCGTCATGC CAA ACTTGACGTCATGCG TCACGCGCCAACCTG TERM 543 805689 - 805666 - g 72 -11 -3.53012 | gap 1 GGGGCGCGCTGGAAA GCATGGCC-GC GCG GCTGGCCACGC TGCACGCCAGCGACG Rmet_4357 805329 - 806051 + | GntR family transcriptional regulator Rmet_4358 807036 - 806164 - | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 544 806365 - 806385 + g 70 -11.1 -3.36273 | TTTGCGAGTGCGCGC GTCGCGCAG GAA TTGCGCGGC TTCCTCTTCGGCCGA Rmet_4359 808249 - 807038 - | succinyl-CoA synthetase (ADP-forming) beta subunit TERM 545 808488 - 808529 + G 79 -2.1 -5.01823 | gap 1, opp_overlap 808513, overlap 808513 CCAAATGGGATGGGC TGCTTGCTGCGGTGCGTCGT TGA AAGTCG-GCAGCGGCCAGCA TTTTGTTCTTGTTGT TERM 546 808722 - 808707 - g 75 -6.8 -4.41494 | gap 1, opp_overlap 808707, overlap 808708 808709 CACGCTGAAGCAAAA GTCCCGC GAC GCGGG-C GTCATATCCGGCGGC Rmet_4360 808477 - 810399 + | thiamine pyrophosphate enzyme-like TPP binding region Rmet_4361 810454 - 811686 + | formyl-coenzyme A transferase TERM 547 811736 - 811776 + F 77 -11 -3.57144 | gap 1, opp_overlap 811734 ATTCCGGCGAAATCC GCAGG-CCGCCCGCATCTC CAAT GCGTGGCGGGTGGGCCTGC TTTCGCCCTGCGCAG TERM 548 811787 - 811806 + F 89 -10.6 -4.62069 | CCTGCTTTCGCCCTG CGCAGCCC ATCC GGGCCGCG TTTTTCGCCTGCCCC Rmet_4362 811853 - 813982 + | CoA-binding TERM 549 814010 - 814060 + F 89 -17.2 -3.17075 | gap 3, opp_overlap 814049 TTCGGTCGTTCGTAC G-GCTG--CCTCTTTCCCTCTCGCG CTGG CGTGAGAGGGAAAGAGGGCCAGCGC TTCCATTGCCAAGGC TERM 550 814068 - 814109 + F 83 -5 -5.14563 | opp_overlap 814049 814089, overlap 814071 814074 GCCAGCGCTTCCATT GCCAAGGCCCTCGACATG ACAGCC CACGTCGAGGGCTTCTTC TTTTTTCATAAGGAG TERM 551 814071 - 814106 + F 85 -9.7 -4.67552 | opp_overlap 814049 814089, overlap 814068 814074 AGCGCTTCCATTGCC AAGGCCCTCGACATG ACAGCC CACGTCGAGGGCTTC TTCTTTTTTCATAAG TERM 552 814074 - 814103 + F 100 -13.6 -4.42047 | opp_overlap 814049 814089, overlap 814071 814068 GCTTCCATTGCCAAG GCCCTCGACATG ACAGCC CACGTCGAGGGC TTCTTCTTTTTTCAT Rmet_4363 814130 - 814906 + | fumarylacetoacetate (FAA) hydrolase TERM 553 814946 - 814923 - T 80 -10.2 -4.09739 | opp_overlap 814923 TGAAGGGCGGCAAAA GGCCCCCCAC AACT GCAAGGGGCC TTTTCACCGAGAGAA Rmet_4364 815281 - 814973 - | hypothetical protein Rmet_4365 816344 - 815394 - | LysR family transcriptional regulator TERM 554 817433 - 817445 + G 70 -4.7 -4.41348 | overlap 817434 CAACGGGCTCACGCG TCCGC TGT GCGGC TTTATTTCCGACCGC Rmet_4366 816561 - 817904 + | major facilitator transporter Rmet_4367 817937 - 818866 + | LysR family transcriptional regulator TERM 555 818949 - 818979 + F 95 -14.1 -4.07568 | gap 1, overlap 818952 818973 CGTTCAATTTGAGAT GC-GCAACGCACCC TACG GGGTGCGTTGTTGC TTTTAGAGCGACAGG TERM 556 818952 - 818975 + F 100 -16.8 -3.66908 | overlap 818949 818973 TCAATTTGAGATGCG CAACGCACCC TACG GGGTGCGTTG TTGCTTTTAGAGCGA Rmet_4368 819085 - 819303 + | hypothetical protein Rmet_4369 819914 - 821239 + | major facilitator transporter TERM 557 821262 - 821278 + F 100 -10.8 -5.39755 | CGCTGTAAAACCTTG GCCCGC CTCGT GCGGGC TTTTTTGTCGTTCTA Rmet_4370 821395 - 822411 + | alcohol dehydrogenase GroES-like protein TERM 558 822463 - 822490 + T 100 -24.2 -4.62054 | opp_overlap 822463 CGACACCAATATGAA GGGGCGGGCCTC TCGC GAGGCCCGCCCC TTTTGCTTTGCTTGC TERM 559 822490 - 822463 - T 100 -24.2 -3.40907 | opp_overlap 822463 CGACACCAATATGAA GGGGCGGGCCTC TCGC GAGGCCCGCCCC TTTTGCTTTGCTTGC Rmet_4371 823550 - 822519 - | hypothetical protein TERM 560 823295 - 823238 - G 73 -13.9 -2.91264 | gap 1, opp_overlap 823253, overlap 823211 TGCCCCAGCGATAGA CGCGCACGCGCCGGCTGGCGCCCTGGCC GGT GACCAGTGC-CCATTCTGCGCGGGCGCT GTCGAGCAAGCGCAG Rmet_4372 824422 - 823748 - | TetR family transcriptional regulator Rmet_4373 824651 - 825022 + | XRE family transcriptional regulator Rmet_4374 825478 - 826806 + | homogentisate 1,2-dioxygenase TERM 561 827701 - 827684 - g 79 -10.5 -4.07568 | overlap 827685 GTTCCGCCGCGAAAA CCCGGCG CAAT CGCCGGA GCCGTTGCCGTATCT Rmet_4375 826845 - 828107 + | fumarylacetoacetate hydrolase TERM 562 828140 - 828187 + F 82 -12.2 -3.5774 | opp_overlap 828146, overlap 828146 ACGGCGGCCACGGCA AGTCAACAGGGCGGA-GCGGCA AGAAAG TGCTGCATCCGCCCTGTT-ACA TTTCCGAAATTCCGT TERM 563 828146 - 828182 + F 93 -16.7 -3.27704 | gap 1, opp_overlap 828146, overlap 828140 GCCACGGCAAGTCAA CAGGGCGGA-GCGGCA AGAAAG TGCTGCATCCGCCCTG TTACATTTCCGAAAT TERM 564 828182 - 828146 - f 82 -14.5 -3.18274 | gap 1, opp_overlap 828140 828146 GCCACGGCAAGTCAA CAGGGCGGA-GCGGCA AGAAAG TGCTGCATCCGCCCTG TTACATTTCCGAAAT TERM 565 828551 - 828581 + G 70 -2.4 -4.68593 | overlap 828552 TAATGCCGGCCGTCT TCGCGTCGCG TCACGGGGATT CGCGCCGCGC TTTTTCGATGCTGAG TERM 566 828690 - 828654 - g 71 -12.2 -3.28712 | TCTGTCCGTGCACAA CGCGATCGGGGCGATG TTTTC CATCGACCGGAGCGCG GCATCCAATATCCAG Rmet_4376 828244 - 829104 + | hypothetical protein TERM 567 829332 - 829320 - g 71 -9.1 -3.78775 | TGCTGGACTACGAAA TCCGC AAT GCGGA TCGGCTGCGCCGGCC Rmet_4377 829097 - 829876 + | phospholipid/glycerol acyltransferase Rmet_4378 829863 - 830132 + | putative acyl carrier protein Rmet_4379 830185 - 830442 + | putative acyl-carrier-protein Rmet_4380 830450 - 831007 + | hypothetical protein TERM 568 831674 - 831704 + G 70 -4.6 -4.37502 | gap 1, overlap 831676 GGAAGCGCTGGACTG GGCCGCCACGCGC GGCGTG GTGCG-GGCGGTG TTTTCGTCTGGTGGT TERM 569 831676 - 831702 + G 71 -9.4 -3.78877 | gap 1, overlap 831674 AAGCGCTGGACTGGG CCGCCACGCGC GGCGTG GTGCG-GGCGG TGTTTTCGTCTGGTG TERM 570 832191 - 832140 - g 80 -15.3 -3.14211 | opp_overlap 832152 ATCGTGCTGCAGGAA GC-CGGCCAATCGATGCATGACGGC AAGG GCCGTCATGCGCTGATTG-CCGCGC TGCGCCGTGCGCTGG Rmet_4381 831000 - 832673 + | AMP-dependent synthetase and ligase Rmet_4382 832670 - 833422 + | glycosyl transferase family protein TERM 571 833477 - 833443 - g 77 -13.4 -3.36515 | overlap 833441 TTGCACCCCGAAACA CAGGGCGCCGCGCCGC GCC GCCGCACGCCGCACTG GAGCGCCATTGGCGA Rmet_4383 833419 - 834450 + | lipid A biosynthesis acyltransferase Rmet_4384 834428 - 834844 + | thioesterase superfamily protein TERM 572 834929 - 834948 + G 70 -11.4 -3.32844 | gap 1 ACGCCGAGGATCTTT CCGCGGCCG TGT CGG-CGCGG TTGTCCGATGCGCCG Rmet_4385 834841 - 835470 + | outer membrane lipoprotein carrier protein LolA TERM 573 836609 - 836626 + G 72 -8.3 -4.11484 | overlap 836611 GCACCGTTCCCCGGG CTGCGCC AGAT GGCGCTG TTTTCCGCGGTTGGC Rmet_4386 835490 - 837850 + | putative lipoprotein transmembrane Rmet_4387 837847 - 839076 + | tryptophan halogenase TERM 574 839137 - 839172 + G 81 -15.4 -3.04144 | gap 1 CGGTGCTGGCCGGTT GCGCCACCGTCGCCCCG ACG CGGGCCGA-GGTGCCGC TGTTGCGCCTGCCGC Rmet_4388 839073 - 839645 + | hypothetical protein Rmet_4389 839642 - 840832 + | beta-ketoacyl synthase TERM 575 841265 - 841284 + G 80 -15 -3.14132 | CGGTTTCGGTATATC GGCCTGCG GACG CGCAGGCC TTCCTCGAGGGGCAG Rmet_4390 840835 - 841308 + | hypothetical protein fabG 841305 - 842036 + | 3-ketoacyl-(acyl-carrier-protein) reductase Rmet_4392 842033 - 843262 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 576 843783 - 843794 + G 81 -3.6 -5.07567 | AGCGATGCCGATGCG CGTC TCGT GGCG TTTTTTCAACTCTGG TERM 577 843984 - 844042 + G 82 -4.3 -5.0538 | gap 1, overlap 843997 GACGGATTGGGCTTG CCGGA-TGCCACCGGTTGGCGGCTGCGC GAGC GCGACGCCGCCGACTGATTCCGCTCAGG TTTTTTCCAGTGCCG TERM 578 843997 - 844028 + G 71 -13.6 -2.73483 | overlap 843984 TGCCGGATGCCACCG GTTGGCGGCTGCGC GAGC GCGACGCCGCCGAC TGATTCCGCTCAGGT Rmet_4393 843405 - 844031 + | 4'-phosphopantetheinyl transferase Rmet_4394 845048 - 844038 - | IclR family transcriptional regulator TERM 579 845041 - 845021 - G 70 -11.1 -3.30243 | AGTGACGTGTGAGAA TCTCCGCCA TCC TGGCGGGGA CTGCCATTCCAAAAG Rmet_4395 845066 - 845560 + | hypothetical protein Rmet_4396 846681 - 845593 - | extracellular solute-binding protein Rmet_4397 847460 - 846678 - | binding-protein-dependent transport systems inner membrane component Rmet_4398 848473 - 847457 - | binding-protein-dependent transport systems inner membrane component TERM 580 847855 - 847868 + g 71 -8.1 -4.09685 | GCGCGGCATCGAGCA GCAGG GGGT CCTGC TTTTCCAGGCTGGCA TERM 581 848176 - 848197 + g 72 -10.9 -3.53012 | gap 1 GGCAGATCGCGGTGG TCAGCGCGGC GTA GCCG-GCTGA TTTGAGAAACAGCCC Rmet_4399 849583 - 848489 - | spermidine/putrescine ABC transporter ATP-binding subunit TERM 582 848912 - 848888 - G 82 -15.7 -3.17212 | overlap 848871 848889 GCAGGACCCGATGAA TCCGGCCACGA ATG TCGTGGCCGGT GCGCGGTAGATCGCT TERM 583 848911 - 848889 - G 89 -19.2 -2.50113 | overlap 848871 848888 CAGGACCCGATGAAT CCGGCCACGA ATG TCGTGGCCGG TGCGCGGTAGATCGC TERM 584 849796 - 849747 - R 80 -11.4 -3.73224 | overlap 849748 CCACTGGGCATGAAA GTGCGATTGCCAGACCACCTTG GGTTGG CAAGGTGGCCCGGCAACCGGGT CTGGCGGGACTTCGC TERM 585 849795 - 849748 - R 79 -14.9 -2.8372 | overlap 849747 CACTGGGCATGAAAG TGCGATTGCCAGACCACCTTG GGTTGG CAAGGTGGCCCGGCAACCGGG TCTGGCGGGACTTCG Rmet_4400 850092 - 849832 - | hypothetical protein TERM 586 850186 - 850165 - H 74 -10.9 -3.45571 | gap 1 TGGCCCAAAGACTAA CGGTGGCGCA GGA TGC-CCACCG CAGGAAAGCAAAATA Rmet_4401 850177 - 850620 + | hypothetical protein Rmet_4402 851559 - 850639 - | hypothetical protein TERM 587 851514 - 851550 + g 73 -12.3 -3.33492 | gap 1, opp_overlap 851476 GCGTGTTCGGTGTGG CGCCCGGCGT-TGCGG CGGGTA CCTCATACGTCGGGCG TTCTGACATGCCTGG Rmet_4403 853619 - 851634 - | squalene cyclase TERM 588 852499 - 852537 + g 71 -7.3 -4.18506 | gap 1 TACGGGTTCTCGTAC TGGAATGCCCAGC-CGCC AGGC GGCGTGCTGGGCGCAGCA TTGTTTTCCCAGTCG TERM 589 853574 - 853606 + g 100 -8.4 -4.93296 | CGTCGCGTGCGCGGA CGATCGCAGCATCG AGTTC CGATGCGGGGATTG TTTTTCTGGTCATGC Rmet_4404 854215 - 853616 - | TetR family transcriptional regulator Rmet_4405 854331 - 854687 + | hypothetical protein Rmet_4406 854980 - 854756 - | Zinc finger, CDGSH-type Rmet_4407 855175 - 855564 + | hypothetical protein TERM 590 855810 - 855850 + T 100 -21.4 -4.11216 | gap 1, opp_overlap 855816, overlap 855816 TACCAACGCATCACG CAGAAACGGACGGTCGCCA TATT TGGCG-CCGTCCGTTTTTG TTTTCCGGGTCCGCC TERM 591 855816 - 855844 + T 100 -16.8 -5.45802 | gap 1, opp_overlap 855816, overlap 855810 CGCATCACGCAGAAA CGGACGGTCGCCA TATT TGGCG-CCGTCCG TTTTTGTTTTCCGGG TERM 592 855844 - 855816 - T 100 -16.8 -3.93695 | gap 1, opp_overlap 855810 855816 CGCATCACGCAGAAA CGGACGGTCGCCA TATT TGGCG-CCGTCCG TTTTTGTTTTCCGGG Rmet_4408 856876 - 855908 - | hypothetical protein Rmet_4409 857932 - 857027 - | taurine catabolism dioxygenase TauD/TfdA Rmet_4410 859220 - 857988 - | acyl-CoA dehydrogenase-like protein Rmet_4411 861355 - 859217 - | CoA-binding TERM 593 861074 - 861049 - G 77 -12.5 -3.66288 | gap 1, overlap 861050 CAGCGCTGAACAGAA TGGCG-GCGCGG GTG CCGCGCTCGCCC AGGGCGGTGACGGTA TERM 594 861073 - 861050 - G 80 -16 -2.79452 | gap 1, overlap 861049 AGCGCTGAACAGAAT GGCG-GCGCGG GTG CCGCGCTCGCC CAGGGCGGTGACGGT Rmet_4412 861780 - 861382 - | hypothetical protein Rmet_4413 862951 - 861782 - | acetyl-CoA acetyltransferase Rmet_4414 863876 - 862962 - | short-chain dehydrogenase/reductase SDR TERM 595 863674 - 863698 + g 71 -9.1 -3.72576 | overlap 863675 CTGTCAGTATTCGCC ACCGCCTGGCC GCC GGCCGCGCGGA TTTCCTCGGCCACGC Rmet_4415 864886 - 863924 - | hypothetical protein TERM 596 864664 - 864698 + g 71 -7.6 -4.07568 | overlap 864665 TGGCCTTGGTGATCA TGGTCGCGGCGATGGC ACC GCCCGCGCCGCCACGG TTTTCCACCACCACA TERM 597 864905 - 864923 + H 77 -3.8 -4.95896 | TGTCTCCTTGCTATC CGCTGC ATCCGTG GCAGTG TTTTTATAAATTTAT TERM 598 865188 - 865149 - H 81 -13.6 -3.4072 | gap 1, overlap 865152 CACGGCGTATGAGAA TCACCGCGCAGGCAGGC GCGGCAA GCCCGCC-GCGCGGCAA GACGTTGGCCGGACG TERM 599 865185 - 865152 - H 79 -15.3 -2.86271 | gap 1, overlap 865149 GGCGTATGAGAATCA CCGCGCAGGCAGGC GCGGCAA GCCCGCC-GCGCGG CAAGACGTTGGCCGG Rmet_4416 865278 - 866054 + | GntR family transcriptional regulator Rmet_4417 866316 - 866095 - | hypothetical protein Rmet_4418 867349 - 866321 - | integrase catalytic subunit TERM 600 867244 - 867273 + g 75 -7.7 -4.23781 | overlap 867239 TAGTGCTCTTGTCAC GCCCCAGGGCCCT GGCT ATGGCGCTGAGGC TTTGCTTTTGCTGCA Rmet_4419 868172 - 867357 - | hypothetical protein Rmet_4420 869457 - 868216 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4421 870676 - 869483 - | MmgE/PrpD family protein TERM 601 870707 - 870685 - R 90 -19.2 -3.07816 | opp_overlap 870685 870688, overlap 870688 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 602 870685 - 870707 + r 91 -19.2 -3.18264 | opp_overlap 870685 870688, overlap 870688 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 603 870688 - 870704 + r 93 -15.1 -3.73647 | opp_overlap 870688 870685, overlap 870685 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 604 870704 - 870688 - R 90 -15.1 -3.68569 | opp_overlap 870685 870688, overlap 870685 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_4422 870931 - 870716 - | hypothetical protein Rmet_4423 871818 - 870985 - | ATPase Rmet_4424 873254 - 871815 - | integrase catalytic subunit Rmet_4425 873935 - 873366 - | hypothetical protein Rmet_4426 874366 - 874037 - | MmgE/PrpD family protein Rmet_4427 875548 - 874382 - | acyl-CoA dehydrogenase-like protein Rmet_4428 875759 - 876820 + | MaoC-like dehydratase TERM 605 876890 - 876869 - g 72 -11.5 -3.51032 | AGGCGGTAACGACAA GGAGCGGGG TAGT CCCCGGTCC GTCCGACCCATCAAG TERM 606 877900 - 877926 + G 70 -2.1 -4.67353 | gap 1, opp_overlap 877883, overlap 877901 CGGGTCACCGGCATG GCGATGC-CCGC GGAA GCGGAGCGCCGG TTTTTCGCTGCCTGA Rmet_4429 876820 - 877941 + | citrate lyase beta subunit-like protein TERM 607 878004 - 878055 + F 93 -15.9 -3.63627 | gap 3, overlap 878008 ACTGCCTGACGCAGC GG-T-ACCGGCGCCC-CGCGCGACCA GCT TGGCCGCGCCCGGGCGCCGGTTGTCC TTTCGGCTGTCGCGC TERM 608 878008 - 878049 + F 100 -23.7 -3.60865 | gap 1, overlap 878004 CCTGACGCAGCGGTA CCGGCGCCC-CGCGCGACCA GCT TGGCCGCGCCCGGGCGCCGG TTGTCCTTTCGGCTG Rmet_4430 878316 - 879806 + | aldehyde dehydrogenase TERM 609 880101 - 880088 - g 76 -9.5 -4.07568 | GGTGCTGGGCGAAAA CGGCC TGCT GGCCG GTGGCCGCGCCGGTC Rmet_4431 879843 - 880724 + | 6-phosphogluconate dehydrogenase, NAD-binding Rmet_4432 881806 - 880802 - | IclR family transcriptional regulator TERM 610 881782 - 881764 - G 84 -8.2 -4.51812 | overlap 881757 881766 GTTCAGAAGAATAAA TATTCCGT TCG ACGGAACA AGACGGCTGGATCGC Rmet_4433 881883 - 882866 + | hypothetical protein Rmet_4434 883073 - 883552 + | hypothetical protein Rmet_4435 884497 - 883661 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Rmet_4436 885375 - 884494 - | Beta-lactamase class A-like protein Rmet_4437 886698 - 885385 - | hypothetical protein Rmet_4438 887919 - 886930 - | hypothetical protein TERM 611 887480 - 887522 + g 80 -14.9 -3.04792 | gap 1, opp_overlap 887480 887479 GTGTAATCCACGAAC TCCTTCAGCGTGCGGGCCGG GAAG CCGGGGTGCACGCTGA-GGA TGTTGGGGCTGCTGA Rmet_4439 889411 - 887978 - | dihydroorotase Rmet_4440 889875 - 889453 - | endoribonuclease L-PSP Rmet_4441 891144 - 889891 - | FAD dependent oxidoreductase Rmet_4442 892266 - 891262 - | LysR family transcriptional regulator Rmet_4443 893578 - 892283 - | hypothetical protein TERM 612 893521 - 893557 + g 74 -13 -3.2244 | gap 1, opp_overlap 893510, overlap 893512 AGAAGTGATGGAGCT CGCCGTCACCCAGCCGT CGGC ACGGCAGGG-GATGGTG TTCGATCTTGTCGTG Rmet_4444 894614 - 893643 - | hypothetical protein TERM 613 894937 - 894922 - g 70 -6 -4.2349 | opp_overlap 894928 GTTCGATATGGAAAA GGGCAG GCTG CGGCCC ACGCCCGAGGCGCAG Rmet_4445 894755 - 895645 + | LysR family transcriptional regulator TERM 614 895875 - 895913 + G 77 -11.7 -3.76224 | gap 1 TTCACCGTGCTGGAC CTGACGCGCGTGCGTTCG GGCC CGGCTGC-CGTGCGTCAG TTTGCTGACTGGGGC Rmet_4446 895836 - 897017 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4447 897069 - 897827 + | GntR family transcriptional regulator Rmet_4448 897824 - 898648 + | enoyl-CoA hydratase TERM 615 899578 - 899555 - g 74 -13.2 -3.28745 | opp_overlap 899539, overlap 899550 CGCTGAACAAGGCAA TTGGCAAGGC AATG GCCTCGCCAA AGCTGGTGCAGCGCT Rmet_4449 898729 - 899712 + | hypothetical protein TERM 616 899730 - 899745 + F 71 -7.5 -4.1891 | opp_overlap 899729 899730, overlap 899729 899725 GCGCCGGGGACAAAG GGGGG ACATCA CCCCC TTTGTCTTCCCCCGC Rmet_4450 899808 - 900419 + | putative transcription regulator protein Rmet_4451 900930 - 900445 - | hypothetical protein Rmet_4452 901377 - 900967 - | response regulator receiver domain-containing protein TERM 617 901640 - 901652 + H 84 -9.1 -4.48987 | opp_overlap 901638 901640 CATATCTTGAAAAGA TGCCC CTT GGGCA TTTTGCTTCTCACAC TERM 618 901789 - 901746 - g 88 -13.9 -3.8211 | gap 3 CTCGACGTAGAAGAA GCCCGCGCGCGTGCCGCACTGG GTA CC-G-GCGCCACGC-CGCGAGC GCCGCTGGAGCGGCA Rmet_4453 901686 - 902057 + | TraR/DksA family transcriptional regulator Rmet_4454 904257 - 902590 - | AMP-dependent synthetase and ligase TERM 619 903692 - 903728 + g 75 -15.2 -2.73875 | gap 1, overlap 903690 TTGGCTGCGATCACT GCCGACAGG-GATTCCG CGCC CGGTGTCTCCTGTCGGC TCGTATTGGCGAACA TERM 620 904333 - 904374 + r 82 -14.4 -3.14132 | opp_overlap 904333, overlap 904336 GTCCGCGGTCATCAA GCAGGCGGACGCATGGGT GGAAGA ACCCCTGCCTCCGCCTAC TTGATGACGACCGGA TERM 621 904374 - 904333 - R 89 -16.6 -3.14132 | opp_overlap 904333 904336 GTCCGCGGTCATCAA GCAGGCGGACGCATGGGT GGAAGA ACCCCTGCCTCCGCCTAC TTGATGACGACCGGA TERM 622 904336 - 904371 + r 77 -14.7 -2.77899 | opp_overlap 904333, overlap 904333 CGCGGTCATCAAGCA GGCGGACGCATGGGT GGAAGA ACCCCTGCCTCCGCC TACTTGATGACGACC Rmet_4455 905333 - 904371 - | hypothetical protein TERM 623 904881 - 904910 + g 79 -5.6 -4.65895 | gap 1 GCCACGGCCGACGAT GCC-GCGTTCGGC GATGG GCAGCACGCTGGC TTTTTCCATGCCGCC Rmet_4456 905685 - 906074 + | cupin 2, barrel Rmet_4457 906137 - 907120 + | hypothetical protein Rmet_4458 907133 - 908305 + | acyl-CoA dehydrogenase-like protein TERM 624 908375 - 908351 - T 100 -21.5 -3.93401 | opp_overlap 908344 CGTAGAAATGAAGAA GCCCTGGTGCG CGA CGCACCAGGGC TTGGCGATGGTGTGA Rmet_4459 909621 - 908746 - | 6-phosphogluconate dehydrogenase, NAD-binding TERM 625 910152 - 910164 + G 70 -5.5 -4.28188 | overlap 910150 ACCGGGCATTCAGTA CGACC CGT GGTTG TTTCTATTGTCGATC TERM 626 911709 - 911693 - g 81 -13.7 -3.53811 | opp_overlap 911693 CTGAGGGCGTGGAAA CGACCGC TCA GCGGTCG TTCCTGGCAGGTCTG TERM 627 911693 - 911709 + G 76 -13.7 -3.15249 | opp_overlap 911693 CTGAGGGCGTGGAAA CGACCGC TCA GCGGTCG TTCCTGGCAGGTCTG Rmet_4460 909685 - 911814 + | diguanylate cyclase/phosphodiesterase Rmet_4461 912120 - 911854 - | hypothetical protein Rmet_4462 912454 - 912753 + | hypothetical protein TERM 628 912989 - 912960 - g 75 -7.7 -4.23781 | overlap 912955 TGCAGCAAAAGCAAA GCCTCAGCGCCAT AGCC AGGGCCCTGGGGC GTGACAAGAGCACTA Rmet_4463 912884 - 913912 + | integrase catalytic subunit Rmet_4464 914365 - 913901 - | hypothetical protein Rmet_4465 914575 - 915195 + | two component heavy metal response transcriptional regulator Rmet_4466 915252 - 916694 + | heavy metal sensor signal transduction histidine kinase Rmet_4467 916712 - 917146 + | 3-demethylubiquinone-9 3-methyltransferase TERM 629 917161 - 917191 + T 72 -14.1 -2.62439 | gap 2, overlap 917160 917158 ACGCACTGACGTATT GCGGGTGA-G-CGGC CAA GCCGTCGTCACCCGC CTCTTTCCGCCTCTT TERM 630 917227 - 917262 + T 100 -24.8 -2.62396 | TTCTCCGGTTTTCTC CTGCCCCCTCTCCCGC GTTC GCGGAAGAGGGGGCAG TCATGTCAGCGGCTC Rmet_4468 920399 - 917268 - | heavy metal efflux pump CzcA Rmet_4469 921307 - 920414 - | secretion protein HlyD TERM 631 920515 - 920483 - G 80 -15.5 -2.87132 | GTTGCCCGCCACATA GCGATCGCCGGCGGC CAG GCCGTCGACGATCTC GATGCGCTTGCCGTC TERM 632 921389 - 921379 - R 75 -8.2 -4.2803 | CACGTTAAGGCAAAA CGGC TCC GCCG TTGGGCATCAATACG Rmet_4470 921746 - 921411 - | TraR/DksA family transcriptional regulator Rmet_4471 922626 - 921763 - | hypothetical protein Rmet_4472 924119 - 922641 - | sulphate transporter TERM 633 923059 - 923083 + g 72 -3.6 -4.68593 | gap 1, overlap 923062 ACCGTCACTACCACG GTGGCCAGCAT CACC ATGCTGGA-AC TTTTTGGGTGCTCGC TERM 634 923241 - 923223 - G 72 -8.8 -4.00038 | CATCAGCAGCAGAAA CACGCCAG CGG CCAGCGTG GAGAGTCGGCCACGA TERM 635 923794 - 923781 - G 71 -8.1 -4.1399 | overlap 923790 CGAGCGAGAGACAAA GCGCA TCAA TGCGC CCAGCTTGAGCCACC TERM 636 924866 - 924892 + G 80 -15.2 -3.14132 | ATGCTGTCGGTAATG GGCGCGTTCG CCGAGTT CGAACGCGCC TTGATCCGCGAGCGG Rmet_4473 924533 - 925093 + | resolvase-like protein TERM 637 925212 - 925258 + G 76 -14.3 -3.10522 | gap 1, overlap 925252 CGACCTCTCCATCAT CCGGCAGCGGCGCGGCCCGGCC AACC GGCTGGGCTTCGCCG-TGCAGC TCTGTTACCTGCGCT TERM 638 926604 - 926578 - g 72 -10.9 -3.53012 | overlap 926595 GTGCCGCCCGCGAAA TTCGCCAGCCT CAAGC AGGCCAGCGAA TTGCCGCTGGCCGTG TERM 639 926616 - 926595 - g 71 -13.7 -2.72344 | overlap 926578 CGCCAGCCTCAAGCA GGCCAGCGA ATTG CCGCTGGCC GTGGCCACCGACTGC TERM 640 927755 - 927771 + G 71 -4.3 -4.57073 | opp_overlap 927739, overlap 927753 GCGAGGCGCGCAATG CGCTGGC CAG GGCAGTG TTTTTCAACCGCCTG TERM 641 928035 - 928067 + G 75 -3.4 -4.75954 | overlap 928037 CGCGGGCAAGTTCAG GC-CGCTACGACCGCT GCA ACCGG-CTTAGCGTGC TTTATTTTCCGTTTT Rmet_4474 925096 - 928062 + | transposase Tn3 TERM 642 928383 - 928360 - g 81 -10.9 -3.96148 | opp_overlap 928359 928356 TTGGCGCAGCAGAAA GCCGCCCGC TACTTT GCCGGCGGC ATCCTGTCCTCGGAG Rmet_4475 928099 - 929277 + | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein Rmet_4476 929382 - 930239 + | inner-membrane translocator Rmet_4477 930239 - 931237 + | inner-membrane translocator Rmet_4478 931234 - 932001 + | ABC transporter related Rmet_4479 931998 - 932702 + | ABC transporter related Rmet_4480 932726 - 933988 + | amidase, hydantoinase/carbamoylase Rmet_4481 934022 - 935515 + | MlrC-like protein Rmet_4482 936148 - 935555 - | TetR family transcriptional regulator TERM 643 936060 - 936022 - G 81 -12.4 -3.83102 | GAAAGTAGTAGTAAA GCGACCCCTTTGGCGC GCCACTT GCGCCAAGGATGTCGC TCAGACCGGTGCCCG Rmet_4483 936224 - 936649 + | phenylacetic acid degradation-related protein TERM 644 937423 - 937372 - g 71 -7.4 -4.07568 | opp_overlap 937355, overlap 937373 CGTGGCCTCCGAAAA GGCCACGCATGTCATCC-TGCGGC GCTAGG GACGCACGGATGACATGCCTG-CA GATCGGCGCCCGGCC Rmet_4484 936755 - 937399 + | bifunctional deaminase-reductase-like protein Rmet_4485 938302 - 937439 - | hypothetical protein TERM 645 938007 - 938058 + g 83 -14.7 -3.17723 | gap 3 CCCGCCCGGATGCCC GCGCCGACA-CGGATGCTGTG-TCCG ACC CGGATCACAG-ATTCGATGTCGACGC TTCCCTTCACAATCA Rmet_4486 939786 - 938866 - | hypothetical protein Rmet_4487 940252 - 939893 - | hypothetical protein TERM 646 940417 - 940381 - R 100 -15.1 -5.06816 | ACGGCGCAATAAAAA GACCCGGAGAGCCGCAC CTA GCAAGGCTTTCCGGGTC AGATACCATAGTGGA Rmet_4488 941775 - 940909 - | hypothetical protein TERM 647 941810 - 941838 + r 100 -11.8 -4.87803 | gap 1 ACGTTTGTGGACCGC GCCCGG-AACAGT TGCC GCTGTTGCCGGGC TTTTCTTTGGGGCTA TERM 648 941927 - 941901 - R 72 -11.4 -3.2794 | overlap 941903 TGTTATTGATATGAA TAGCGCGCGCCG CCG CGCCGCGCGCCG GCCTGCGGCCGGCAC TERM 649 941961 - 941903 - R 100 -23.6 -3.20573 | overlap 941901 TTATTGATATGAATA GCGCGCGCCGCCGCGCCGCGCGCCGGCC TGC GGCCGGCACCCGTCACGCCGCCCCACGC TTGAGGCTCCGCCGC Rmet_4489 943022 - 941946 - | zonular occludens toxin TERM 650 942892 - 942873 - G 78 -10.7 -4.0616 | overlap 942835 TAGCCGAATGACAAA TGCCCGC GAGTGA GCGGGCA TAAGGTGATCCATGT Rmet_4490 943285 - 943022 - | hypothetical protein Rmet_4491 943627 - 943289 - | hypothetical protein TERM 651 943591 - 943574 - G 72 -8.5 -3.95051 | overlap 943565 GAAGAACTTGAGAAA GACTTTC ACGA GAAAGTC GAACAGCATCAGCAA Rmet_4492 945165 - 943630 - | hypothetical protein TERM 652 945208 - 945168 - R 93 -17.1 -3.36327 | opp_overlap 945168 945173, overlap 945173 945180 GTAGTGGACGCATAA GCAAAGAGGAAACCGTTTG TCC CAAACGATTTCCCCTTTCC TTATGCTGGCGGGCT TERM 653 945168 - 945208 + r 76 -12.7 -3.40522 | opp_overlap 945168 945173 945180, overlap 945173 GTAGTGGACGCATAA GCAAAGAGGAAACCGTTTG TCC CAAACGATTTCCCCTTTCC TTATGCTGGCGGGCT TERM 654 945203 - 945173 - R 100 -15.6 -4.00868 | opp_overlap 945173 945168, overlap 945168 945180 GGACGCATAAGCAAA GAGGAAACCGTTTG TCC CAAACGATTTCCCC TTTCCTTATGCTGGC TERM 655 945173 - 945203 + r 84 -11.2 -4.02108 | opp_overlap 945168 945173 945180, overlap 945168 GGACGCATAAGCAAA GAGGAAACCGTTTG TCC CAAACGATTTCCCC TTTCCTTATGCTGGC TERM 656 945402 - 945372 - R 95 -15.6 -3.72893 | opp_overlap 945372 945379, overlap 945379 GATCGCGTGAGGAAA GAGGAAACCGTTTG TGC CAAACGATTTCCCC TTCCCTCACGCTGTC TERM 657 945616 - 945584 - R 86 -15 -3.35679 | TCGGCCTATGGACAA CTGGTGGAAAACGA TACTG CCGTTTCCCACCAG TTGCCCACAGGCACG Rmet_4493 946111 - 945857 - | hypothetical protein TERM 658 946151 - 946129 - R 71 -5.5 -4.37886 | overlap 946131 946132 GCACTCCCGAGAAAA GACGGTGGA GACGG TCCACCAGC CGTACAACCTCAATC Rmet_4494 947134 - 946823 - | hypothetical protein Rmet_4495 947221 - 947571 + | hypothetical protein Rmet_4496 950168 - 947754 - | TonB-dependent siderophore receptor Rmet_4497 952413 - 950179 - | TonB-dependent siderophore receptor TERM 659 950874 - 950930 + g 70 -11.6 -3.37831 | opp_overlap 950868, overlap 950891 950919 GCCTGAAGACGATGC CGGCCAGCGGCGTCACAG-CGTTCTCGT CAT ACGAGGACGACTTTG-CGCCGGTTGCGG TGTTGTAGTTGTTCG Rmet_4498 953503 - 952517 - | putative FecR TERM 660 952609 - 952599 - G 75 -6.8 -4.36914 | overlap 952600 952603 GCCTTCTCCAGAAAA CGCA GCG TGCG ATCCGTATCGTCGAT Rmet_4499 954031 - 953531 - | sigma-24 (FecI-like) TERM 661 954369 - 954350 - g 71 -4.2 -4.49958 | ACGTGACCAAACAAA TGCTGCGC CAAG GCGAAACA GCACTGGCCACCGAA TERM 662 954580 - 954613 + G 88 -17.5 -3.14132 | overlap 954585 GCGGATGTGAGGCGT TCGCACGCGAGGTCG TGCA CGACCTCGCGTCTGA TTGCTGGAAAAGCCA TERM 663 954585 - 954608 + G 89 -18.2 -2.93723 | overlap 954580 TGTGAGGCGTTCGCA CGCGAGGTCG TGCA CGACCTCGCG TCTGATTGCTGGAAA Rmet_4500 954337 - 954702 + | hypothetical protein Rmet_4501 955697 - 954714 - | twin-arginine translocation pathway signal Rmet_4502 957467 - 955773 - | acyl-CoA synthetase TERM 664 956556 - 956535 - G 79 -6.5 -4.56597 | gap 1, overlap 956536 956537 GGGCTGCGCGAAAAA GTCCACCAGC ATG GCCGGCGG-C GCGCCCCAGGCCGAG Rmet_4503 958581 - 957481 - | hypothetical protein Rmet_4504 958785 - 959987 + | AraC family transcriptional regulator Rmet_4505 960870 - 959944 - | LysR family transcriptional regulator TERM 665 960405 - 960388 - G 79 -11.3 -3.8211 | CGGCACCGAGAACAA GGACTCC CACT GGAGTCC GCCCGCTCCCGGCCC Rmet_4506 961163 - 962467 + | major facilitator transporter TERM 666 963022 - 963032 + G 77 -4.6 -4.62069 | overlap 962976 963014 CTTCGAGCGCTTCCC CTGC GAC GCGG TTTTTGCGCTCCACA Rmet_4507 962522 - 963733 + | peptidase M20D, amidohydrolase Rmet_4508 964658 - 963786 - | type IV pilus assembly PilZ Rmet_4509 964959 - 965267 + | hypothetical protein TERM 667 965473 - 965495 + G 71 -13.4 -3.04144 | opp_overlap 965470 965473 CGTCACCGAGAACCA GCACGTAGCC AAG GGCGACGTGC TATTCGAAATCGACC Rmet_4510 965264 - 966313 + | multidrug resistance protein MdtN TERM 668 968019 - 968067 + G 81 -4.9 -4.91109 | overlap 968021 968060 GGCACTGACTGGATC GAGGCCCGCCAGCGCCATCTGGC AAC GCTGGACGCCGTAGCCGGTCCGC TTTTTCTGCTGGCGG Rmet_4511 966294 - 968285 + | fusaric acid resistance protein region Rmet_4512 968278 - 969840 + | outer membrane efflux protein Rmet_4513 970699 - 969848 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ Rmet_4514 972554 - 970875 - | phage integrase TERM 669 973640 - 973625 - g 72 -6.8 -4.30576 | gap 1, overlap 973626 973629 GCGCGAGGACGAAAA GCGACGC GTC GCG-CGC GAGCTTCACGACGAT Rmet_4515 973119 - 974270 + | putative PAS/PAC sensor protein Rmet_4516 974267 - 974911 + | two component LuxR family transcriptional regulator Rmet_4517 975394 - 974942 - | hypothetical protein TERM 670 975559 - 975572 + H 71 -9.5 -3.80855 | opp_overlap 975559 975558 ATTTGAGACCCAAAT GGCGC CGAA GCGCC TTGCTTTTTCAGGAG Rmet_4518 975593 - 976441 + | hypothetical protein Rmet_4519 977875 - 976517 - | beta-lactamase-like protein Rmet_4520 978804 - 977980 - | hypothetical protein Rmet_4521 979205 - 979978 + | Crp/FNR family transcriptional regulator Rmet_4522 980940 - 979999 - | transcriptional regulator TERM 671 980373 - 980389 + g 71 -12.3 -3.28712 | GTCCACCCGAGCGCC GCTGGTG CAT CACCAGC TTGTGGGCGACCGAC Rmet_4523 981084 - 981884 + | short-chain dehydrogenase/reductase SDR Rmet_4524 982568 - 981918 - | negative transcriptional regulator TERM 672 982136 - 982120 - G 80 -12.3 -3.72695 | opp_overlap 982118 982127 ATCGTGTCGACGAAA TCCGACG GGG CGTCGGA CATCTTCCACGGCCT Rmet_4525 983836 - 982829 - | hypothetical protein Rmet_4526 984834 - 983854 - | ATPase Rmet_4527 987365 - 984831 - | spermine synthase TERM 673 986325 - 986292 - G 87 -7.5 -4.79373 | gap 1, opp_overlap 986323, overlap 986307 GAACACAATACAAAA TGCCGCCATGC-CA AAGCTCG CGCACATGGCGGCA AGCTGGCTGCCGGTG Rmet_4528 988637 - 987561 - | putative nonspecific acid phosphatase precursor Rmet_4529 989927 - 988701 - | hypothetical protein TERM 674 989878 - 989905 + g 73 -9.9 -3.86835 | gap 2, opp_overlap 989848, overlap 989880 CGCCGCCGCCACGAT GA-CGGCG-CCGC GCTC GCGGCCGCCGCTC TTTCCTGCTGTTTAC Rmet_4530 991147 - 990056 - | hypothetical protein Rmet_4531 992739 - 991144 - | tetratricopeptide TPR_2 Rmet_4532 993740 - 992736 - | von Willebrand factor, type A Rmet_4533 994224 - 993727 - | hypothetical protein TERM 675 993960 - 993917 - G 73 -5.7 -4.36914 | overlap 993918 993939 TGGGTGTGCAGAAAA TCGCGCCACGCCGGGCCAG ACAGGG CCGCCACGGCGTGCCGGGG CCACTGGACCAATGC Rmet_4534 995207 - 994368 - | phage integrase TERM 676 995103 - 995084 - G 74 -11.4 -3.59979 | overlap 995098 995099 TGCTGGCAGGCGAAA GCGGCCCT TCGA AAGGCCGC CAGTCATGGCGATCG Rmet_4535 996008 - 995301 - | hypothetical protein TERM 677 996070 - 996032 - R 100 -17.4 -4.14725 | opp_overlap 996028 GACGTAAACGACAAA GGGCGCGATGATACCGCG AGT CGCGGTGCCATCACGCAC CCAGTACCTTGCCAG Rmet_4536 997075 - 996119 - | hypothetical protein TERM 678 997773 - 997761 - g 70 -4.7 -4.42788 | overlap 997762 GCCAATGGCAGAAAA CCGCC AAG GGCGC CTTCGAGATCCGGGG Rmet_4537 997274 - 998572 + | D-3-phosphoglycerate dehydrogenase Rmet_4538 999106 - 998597 - | MerR family transcriptional regulator TERM 679 998630 - 998659 + g 100 -19.3 -3.61398 | gap 1 TTTCCGGTGCTCACA GGGCCCGGCCC-CG AAA TGCGGGCCGGGCCC TTCTTCCGCCAGCGC TERM 680 999174 - 999191 + H 76 -9.9 -3.78775 | opp_overlap 999168 999166, overlap 999167 CAACAAACAGCTTGA CCTCAAG CGTG CTTGAGG TTTGATACTGGCGCG TERM 681 999463 - 999418 - g 77 -12.6 -3.62572 | gap 3, opp_overlap 999438 999439, overlap 999420 CAGGAGCAGGTGAAA CAGGCGCTTGCCAACCTGC-GCG TCG CGCTGCAGGCCGGCG-GCGCC-G ACATTCCTGATATCG TERM 682 999462 - 999420 - g 90 -16.3 -3.39018 | opp_overlap 999438 999439, overlap 999418 GGAGCAGGTGAAACA GGCGCTTGCCAACCTGC-GCG TCG CGCTGCAGGCCGGCG-GCGCC GACATTCCTGATATC Rmet_4539 999229 - 999657 + | endoribonuclease L-PSP Rmet_4540 999760 - 1000227 + | hypothetical protein Rmet_4541 1000773 - 1000216 - | hypothetical protein Rmet_4542 1002437 - 1000965 - | major facilitator transporter Rmet_4543 1003445 - 1002531 - | LysR family transcriptional regulator Rmet_4544 1003549 - 1004313 + | short-chain dehydrogenase/reductase SDR Rmet_4545 1004761 - 1004348 - | hypothetical protein TERM 683 1004803 - 1004790 - R 79 -8.1 -4.57073 | opp_overlap 1004789 GAGTCGGCGGAAAAA CCGTC GGAA GACGG GTGCTATGCCTTGGA Rmet_4546 1005447 - 1004866 - | putative transcriptional regulator TERM 684 1005549 - 1005522 - R 100 -15.6 -5.47159 | overlap 1005523 CGCAACAAACAAAAA CGGCGCCGCAAC ATCC ATTGCGGCGCCA GAATACCTGCGCGGA TERM 685 1005548 - 1005523 - R 100 -16.9 -3.86668 | overlap 1005522 GCAACAAACAAAAAC GGCGCCGCAAC ATCC ATTGCGGCGCC AGAATACCTGCGCGG TERM 686 1005581 - 1005555 - R 74 -12.3 -3.21276 | opp_overlap 1005567 1005570 1005575, overlap 1005553 TGCGGCGCCAGAATA CCTGCGCGG AGTGGAGTG CCGCGCAGG CCCTCGCTTTCAGTT Rmet_4547 1006757 - 1005600 - | putative outer membrane porin signal peptide protein TERM 687 1007131 - 1007112 - g 76 -13.6 -3.17075 | opp_overlap 1007111, overlap 1007094 GCCTGCGCAAGGCAA GGCTGCCA AGCG TGGCAGCC CTGGTGTGGAAGCGA Rmet_4548 1007050 - 1007793 + | TetR family transcriptional regulator TERM 688 1007816 - 1007787 - T 90 -14.3 -3.53012 | gap 1, overlap 1007788 CGGTTCCGCCCGAAA GCGCTAGCCGGCCC ACA GGGCCAGCCAGC-C TCGCCCTCCCGCCGA TERM 689 1007816 - 1007788 - T 77 -14.5 -2.71712 | overlap 1007787 GGTTCCGCCCGAAAG CGCTAGCCGGCCC ACA GGGCCAGCCAGCC TCGCCCTCCCGCCGA Rmet_4549 1013713 - 1007834 - | UvrA family protein TERM 690 1012449 - 1012473 + g 72 -8.5 -4.07568 | GCGTTCCCGGCGCTC CCCAGGCGC CACTGCA GCGCCTCGG TTTTCAGGCGGGCAC Rmet_4550 1014400 - 1014708 + | hypothetical protein Rmet_4551 1015083 - 1015370 + | hypothetical protein TERM 691 1015443 - 1015468 + F 100 -9.7 -5.19261 | gap 1 GCATACCTCCCGCAA CGCCCACTTCCT TCT AGGT-GTGGGCG TTTTTTGATCGCTTT TERM 692 1017395 - 1017364 - g 80 -14.4 -3.40141 | opp_overlap 1017389 1017393 TAAAAGTGGAAGGAA CTGGTCGCGGGTCA CCTC TGACCCCCGACCCG AAGATCGGTTTGCCA Rmet_4552 1015950 - 1018508 + | curculin-like (mannose-binding) lectin TERM 693 1018640 - 1018615 - f 81 -6.1 -4.82901 | opp_overlap 1018617 1018621, overlap 1018617 GGGTGCGGACAAAAA CTTGGACTACC TGGA GGTAGTTCATG TACTCGTATGAAGAC TERM 694 1019294 - 1019279 - f 72 -2.4 -4.82661 | overlap 1019281 ACTAATAAAAAAGAA GTGGGC GTCG ACCCGC AGCTCCTGAGCAACC Rmet_4556 1020218 - 1020673 + | phage integrase Rmet_4557 1021471 - 1020965 - | methionine sulfoxide reductase A Rmet_4558 1021538 - 1022143 + | uracil-DNA glycosylase superfamily protein Rmet_4559 1022630 - 1022160 - | AsnC family transcriptional regulator TERM 695 1022804 - 1022818 + G 73 -5.6 -4.43189 | opp_overlap 1022806, overlap 1022797 1022806 CCGCGCTCCGGCAAC CACCGG ATT CCGGTC TTTTCTGCCATTGAT Rmet_4560 1022757 - 1023695 + | hypothetical protein Rmet_4561 1024179 - 1023709 - | AsnC family transcriptional regulator Rmet_4562 1024348 - 1024653 + | hypothetical protein Rmet_4563 1025593 - 1024670 - | LysR family transcriptional regulator TERM 696 1025825 - 1025772 - g 74 -11.1 -3.59979 | CGTCGTGAGCTGAAA TTCGCGC-AGGAAGCGTTCTGGCGC GGCGAA ACGCCCGAA-GCCGCCTTGCGCGAA ACCGGCACCACGCTG TERM 697 1026853 - 1026828 - g 74 -11.1 -3.63895 | gap 1, overlap 1026821 CTGAATCAGGGCAAA GCCGC-AGCGGC GAC GCAGCTCGCGGC ATCAGACGCAGCACG Rmet_4564 1025715 - 1028126 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 698 1028298 - 1028278 - g 100 -8.1 -6.02345 | opp_overlap 1028280 1028285, overlap 1028279 1028280 CAACGACAAAAAAAA TGGCGCCGC GCA GCGGCGCTT CCTGCCGCCGCACTG TERM 699 1028297 - 1028279 - g 81 -11.6 -4.18967 | opp_overlap 1028280 1028285, overlap 1028278 1028280 AACGACAAAAAAAAT GGCGCCGC GCA GCGGCGCT TCCTGCCGCCGCACT TERM 700 1028280 - 1028296 + G 80 -15.1 -3.14132 | opp_overlap 1028280 1028279 1028278, overlap 1028285 ACGACAAAAAAAATG GCGCCGC GCA GCGGCGC TTCCTGCCGCCGCAC TERM 701 1028296 - 1028280 - g 80 -15.1 -3.0894 | opp_overlap 1028280 1028285, overlap 1028279 1028278 ACGACAAAAAAAATG GCGCCGC GCA GCGGCGC TTCCTGCCGCCGCAC TERM 702 1028384 - 1028404 + G 70 -13.9 -2.60075 | overlap 1028383 1028390 1028391 1028393 CCCTTCCTCCTGTCA CCGCCACGG CTG CCGCGGCGG GTTCGTTGACCGCCC Rmet_4565 1028158 - 1030359 + | TonB-dependent receptor Rmet_4566 1031842 - 1030430 - | hypothetical protein TERM 703 1031820 - 1031797 - G 89 -10.2 -4.564 | overlap 1031798 AAGCGGAAAGGAAAA CGGCAAGCGC AACT GCGCCCGCCA ATCTGCGGATGGATG TERM 704 1031819 - 1031798 - G 70 -11.5 -3.32756 | overlap 1031797 AGCGGAAAGGAAAAC GGCAAGCGC AACT GCGCCCGCC AATCTGCGGATGGAT TERM 705 1032428 - 1032407 - R 100 -14.5 -5.10154 | opp_overlap 1032407, overlap 1032393 ACCCAAAATGAAAAA GGGCTTCCA TTTC TGGAAGCCC TTTTAATAGGTGGCG TERM 706 1032407 - 1032428 + r 100 -14.5 -4.2828 | opp_overlap 1032393 1032407 ACCCAAAATGAAAAA GGGCTTCCA TTTC TGGAAGCCC TTTTAATAGGTGGCG Rmet_4567 1033524 - 1032634 - | hypothetical protein TERM 707 1033105 - 1033121 + g 71 -10.1 -3.57263 | overlap 1033098 CAGCATCGCCGGGCG CGTGCCG GCC CGGTACG TTTCGACCTGGCGAT TERM 708 1033739 - 1033708 - R 100 -15.2 -4.56597 | opp_overlap 1033710 1033715, overlap 1033715 CCTCGGGCGGAAAAA CGAAAAAGCCCCGC TTGC GCGGGGCTTTTCTG AATTTGGTGCCCAGA TERM 709 1033710 - 1033737 + r 72 -14.2 -2.67803 | opp_overlap 1033708 1033715, overlap 1033715 TCGGGCGGAAAAACG AAAAAGCCCCGC TTGC GCGGGGCTTTTC TGAATTTGGTGCCCA TERM 710 1033732 - 1033715 - R 100 -14.1 -5.18355 | opp_overlap 1033715 1033710, overlap 1033708 CGGAAAAACGAAAAA GCCCCGC TTGC GCGGGGC TTTTCTGAATTTGGT TERM 711 1033715 - 1033732 + r 100 -14.1 -4.51799 | opp_overlap 1033708 1033715, overlap 1033710 CGGAAAAACGAAAAA GCCCCGC TTGC GCGGGGC TTTTCTGAATTTGGT TERM 712 1033774 - 1033792 + r 72 -12.4 -3.05463 | overlap 1033785 GACTCGGTCACCCAT GCGCGACC CCG GGTTGCGC TTGCATGCGCAACCT TERM 713 1033785 - 1033806 + r 77 -11.6 -3.56273 | overlap 1033774 CCATGCGCGACCCCG GGTTGCGC TTGCAT GCGCAACC TTGTCTCGTCCTCGC TERM 714 1033822 - 1033843 + r 90 -14.5 -3.53012 | opp_overlap 1033826, overlap 1033826 TTGTCTCGTCCTCGC GAAAGGCCC TCAA GGGCCTTTC TTTCCGGGCGGAGAA TERM 715 1033826 - 1033839 + r 82 -9.5 -4.41348 | opp_overlap 1033826, overlap 1033822 CTCGTCCTCGCGAAA GGCCC TCAA GGGCC TTTCTTTCCGGGCGG TERM 716 1033863 - 1033890 + r 72 -14.2 -2.67803 | opp_overlap 1033868, overlap 1033868 CGGGCGGAGAAACGA AAAAAGCCCCGC TTGC GCGGGGCTTTTC TGAATTTGGTGCCCA TERM 717 1033885 - 1033868 - R 100 -14.1 -5.42514 | opp_overlap 1033868 1033863 GGAGAAACGAAAAAA GCCCCGC TTGC GCGGGGC TTTTCTGAATTTGGT TERM 718 1033868 - 1033885 + r 100 -14.1 -4.51799 | opp_overlap 1033868, overlap 1033863 GGAGAAACGAAAAAA GCCCCGC TTGC GCGGGGC TTTTCTGAATTTGGT Rmet_4568 1035371 - 1034091 - | cytosine deaminase Rmet_4569 1036120 - 1035455 - | TetR family transcriptional regulator Rmet_4570 1036734 - 1036117 - | uracil phosphoribosyltransferase Rmet_4571 1038266 - 1036959 - | hypothetical protein Rmet_4572 1039501 - 1038263 - | hypothetical protein TERM 719 1039545 - 1039528 - R 77 -11.3 -3.64703 | opp_overlap 1039528 CTCCCCGGATCGAAA CCTGACC AGTT GGTCAGG TTTATATATCCATAC TERM 720 1039528 - 1039545 + r 84 -11.3 -4.1399 | opp_overlap 1039528 CTCCCCGGATCGAAA CCTGACC AGTT GGTCAGG TTTATATATCCATAC TERM 721 1039658 - 1039679 + r 90 -14.5 -3.51411 | overlap 1039654 GACGAAGGCGGTACA TGCTGGTGC GGAC GCACCAGCA TTGATTTGACGAGGT Rmet_4573 1040808 - 1039708 - | acyltransferase 3 TERM 722 1041929 - 1041916 - g 71 -8.1 -4.11692 | overlap 1041919 CACCGAGGCGCAAAA GCAGG GGCA CCTGC CCAAGATCGCACGCG Rmet_4574 1041572 - 1042756 + | acyl-CoA dehydrogenase-like protein Rmet_4575 1042840 - 1043979 + | acyl-CoA dehydrogenase-like protein Rmet_4576 1044190 - 1045146 + | binding-protein-dependent transport systems inner membrane component Rmet_4577 1045146 - 1046072 + | binding-protein-dependent transport systems inner membrane component TERM 723 1046567 - 1046542 - g 77 -5.4 -4.60924 | gap 1 CAAACTGCGCAAAAA CGTCC-GCTTC CCCGC GAAGCCGGGCG TAATGGAAGAACGGG Rmet_4578 1046147 - 1047874 + | extracellular solute-binding protein Rmet_4579 1047915 - 1048892 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_4580 1049005 - 1049982 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_4581 1051391 - 1050030 - | TetR family transcriptional regulator TERM 724 1052645 - 1052630 - g 75 -3.2 -4.75404 | AAACTCGATGAAAAA GGGC AAGCTCAA GCCC GAGCAGGTCGAGCAG TERM 725 1053147 - 1053120 - g 79 -7 -4.56597 | gap 1, overlap 1053122 GGGGCGCTGCAAAAA TTCGGCATG-GCC ATG GGCCCATACCGCA TGGGCGATCTGGCGG Rmet_4582 1051587 - 1053677 + | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase TERM 726 1054633 - 1054614 - g 78 -13.6 -3.17723 | CGATCCGGAATGGAA GCGTCTGG TCGA CCAGACGC TGGCCAAGACCTTCA Rmet_4583 1053871 - 1054785 + | extracellular solute-binding protein TERM 727 1054817 - 1054786 - f 82 -12.2 -3.67597 | opp_overlap 1054785 GTTGTGACGGAATAA GCGCATTCCGGGGG GCTC CCCCCGGAAAACCC CTGAGTTGACGGCCC Rmet_4584 1054941 - 1055240 + | hypothetical protein TERM 728 1055301 - 1055284 - T 100 -12.7 -4.8622 | opp_overlap 1055284 CCGCGCAAGTAAAAA GCCTCGC AGAT GCGAGGC TTTTTTTGTGCCATT TERM 729 1055284 - 1055301 + T 100 -12.7 -5.63504 | opp_overlap 1055284 CCGCGCAAGTAAAAA GCCTCGC AGAT GCGAGGC TTTTTTTGTGCCATT TERM 730 1055329 - 1055380 + T 86 -15 -3.37612 | gap 1, opp_overlap 1055348, overlap 1055330 ATTCAGCGACCATTC AGCG-GCGCACGGCGAAGCAGGACG AAA CGACCTGCTTCGCGCCGCGCGCGCC TTACTTGCGCTTGAG TERM 731 1055330 - 1055379 + T 85 -18.5 -2.62246 | gap 1, opp_overlap 1055348, overlap 1055329 TTCAGCGACCATTCA GCG-GCGCACGGCGAAGCAGGACG AAA CGACCTGCTTCGCGCCGCGCGCGC CTTACTTGCGCTTGA Rmet_4585 1057243 - 1055381 - | dihydroxy-acid dehydratase TERM 732 1057326 - 1057288 - R 79 -15.1 -2.91681 | opp_overlap 1057306 TTGTAATTGGACACA GGCCAGCCAGGGCGCCG GTATG CGGCGGCCGGGCAAGCC ATGGCCGCCAGCCGC Rmet_4586 1058435 - 1057575 - | hypothetical protein Rmet_4587 1058783 - 1060525 + | glycosyl transferase family protein TERM 733 1060594 - 1060652 + G 87 -14.6 -3.58343 | gap 1 CAGCTCCTGCTCAAG GCCGGTGTCAACGCCGTGGGCGCGATC ACGATC GATCGCGCC-ACGCTGTTCACCACGGC TTTCCGCGTGCTGAC TERM 734 1060839 - 1060870 + G 70 -5.1 -4.3534 | gap 1 GATTGGCCCCTTGCG CGTC-GCCGGCATC CTGCT GATACTGGCTGGCG TTTTCCTGATTGCCC Rmet_4588 1060522 - 1060893 + | putative small multidrug resistance transmembrane protein Rmet_4589 1060899 - 1062074 + | DegT/DnrJ/EryC1/StrS aminotransferase Rmet_4590 1062053 - 1063054 + | glycosyl transferase family protein Rmet_4591 1063042 - 1063968 + | hypothetical protein Rmet_4592 1063980 - 1065032 + | hypothetical protein TERM 735 1065118 - 1065064 - g 70 -13.7 -2.52543 | gap 3, opp_overlap 1065068 1065078 ATTGCGCTCAAGGTA GACGTGGACACGCTGCGC-GGCACGC GCGAAG GCGTGCCCGCGCTGC-TGTCCATG-C TGTCCGCCGCCGAGG TERM 736 1065068 - 1065115 + G 86 -18.6 -2.62184 | opp_overlap 1065064, overlap 1065078 CGCTCAAGGTAGACG TGGACACGCTGCGC-GGCACGC GCGAAG GCGTGCCCGCGCTGC-TGTCCA TGCTGTCCGCCGCCG TERM 737 1065078 - 1065106 + G 70 -13.9 -2.65442 | gap 1, opp_overlap 1065064, overlap 1065068 AGACGTGGACACGCT GCGC-GGCACGC GCGAAG GCGTGCCCGCGC TGCTGTCCATGCTGT Rmet_4593 1065040 - 1065930 + | polysaccharide deacetylase Rmet_4594 1068368 - 1065984 - | heavy metal translocating P-type ATPase TERM 738 1068193 - 1068143 - G 74 -11.6 -3.64703 | opp_overlap 1068179 GCGTGCTCACCGAAA CCGATGCGCCGCAGGCCGAGCCGC AGC ACGCATTGGGCTGCGCCGCTTCGG GCGCCGCTTCATGTG TERM 739 1068664 - 1068650 - g 75 -9.2 -3.99592 | ACGCACGAGCACAAA GCCGCC GAC GGCGAC CGGCAAGCGCAAGAC Rmet_4595 1068503 - 1068880 + | hypothetical protein Rmet_4596 1068978 - 1070273 + | outer membrane efflux protein Rmet_4597 1070285 - 1070626 + | secretion protein HlyD TERM 740 1070650 - 1070618 - T 74 -3.4 -4.75954 | overlap 1070621 AAAACGGAAAATAAA GCACGCTAAG-CCGGT TGC AGCGGTCGTAGCG-GC CTGAACTTGCCCGCG Rmet_4598 1073589 - 1070623 - | transposase Tn3 TERM 741 1070930 - 1070914 - G 71 -4.3 -4.57073 | opp_overlap 1070923, overlap 1070917 CAGGCGGTTGAAAAA CACTGCC CTG GCCAGCG CATTGCGCGCCTCGC TERM 742 1072069 - 1072090 + g 71 -13.7 -2.72344 | overlap 1072081 GCAGTCGGTGGCCAC GGCCAGCGG CAAT TCGCTGGCC TGCTTGAGGCTGGCG TERM 743 1072081 - 1072107 + g 72 -10.9 -3.53012 | overlap 1072069 CACGGCCAGCGGCAA TTCGCTGGCCT GCTTG AGGCTGGCGAA TTTCGCGGGCGGCAC TERM 744 1073473 - 1073427 - G 76 -14.3 -3.10522 | gap 1, overlap 1073413 AGCGCAGGTAACAGA GCTGCA-CGGCGAAGCCCAGCC GGTT GGCCGGGCCGCGCCGCTGCCGG ATGATGGAGAGGTCG Rmet_4599 1074152 - 1073592 - | resolvase-like protein TERM 745 1073819 - 1073793 - G 80 -15.2 -3.14132 | CCGCTCGCGGATCAA GGCGCGTTCG AACTCGG CGAACGCGCC CATTACCGACAGCAT TERM 746 1074891 - 1074904 + G 71 -8.1 -4.1399 | overlap 1074878 GGTGGCTCAAGCTGG GCGCA TTGA TGCGC TTTGTCTCTCGCTCG TERM 747 1075444 - 1075462 + G 72 -8.8 -4.00038 | TCGTGGCCGACTCTC CACGCTGG CCG CTGGCGTG TTTCTGCTGCTGATG TERM 748 1075626 - 1075602 - g 72 -3.6 -4.68593 | gap 1, overlap 1075604 GCGAGCACCCAAAAA GT-TCCAGCAT GGTG ATGCTGGCCAC CGTGGTAGTGACGGT Rmet_4600 1074566 - 1076044 + | sulphate transporter Rmet_4601 1076059 - 1076922 + | hypothetical protein Rmet_4602 1076939 - 1077274 + | TraR/DksA family transcriptional regulator TERM 749 1077296 - 1077306 + F 75 -8.2 -4.2803 | CGTATTGATGCCCAA CGGC GGA GCCG TTTTGCCTTAACGTG Rmet_4603 1077739 - 1078575 + | GntR family transcriptional regulator Rmet_4604 1078660 - 1079004 + | hypothetical protein Rmet_4605 1083349 - 1079420 - | PAS/PAC sensor hybrid histidine kinase Rmet_4606 1083839 - 1085134 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 750 1085160 - 1085189 + T 100 -18.7 -4.06384 | gap 1 TGTCGCGCGGCATTG GTGGGCGG-GAAGC CAC GCTTCTCCGCCCAC TTTCTACTCTTGCCG Rmet_4607 1087387 - 1085213 - | TonB-dependent copper receptor TERM 751 1087403 - 1087365 - G 71 -13.8 -2.75535 | overlap 1087367 TGAACAGCGCAATGA CACCCACCCGCTCGTGAT GAC ATCGCGAGCGAGGGCGTG ATAAGAATCAGAAGG Rmet_4608 1087802 - 1087434 - | hypothetical protein Rmet_4609 1088251 - 1089237 + | hypothetical protein TERM 752 1089256 - 1089228 - f 82 -14.5 -3.14344 | overlap 1089215 1089238 GAGCGCCGGCATCAA GGCGCAATGAGCG GCA CGCCCCTCGCGCC ATCGTCAAACCAGGA Rmet_4610 1089283 - 1090638 + | hypothetical protein Rmet_4612 1091785 - 1090928 - | IclR family transcriptional regulator Rmet_4611 1090668 - 1091018 + | hypothetical protein Rmet_4613 1093022 - 1091829 - | acyl-CoA dehydrogenase-like protein TERM 753 1092697 - 1092681 - G 79 -10.8 -4.1552 | CAGTGGCTCAAGAAA CCGCGC CTTCT GCGCGG CGGTGGCCACCTTGC Rmet_4614 1093789 - 1093037 - | short-chain dehydrogenase/reductase SDR Rmet_4615 1093832 - 1094596 + | GntR family transcriptional regulator TERM 754 1095590 - 1095574 - g 76 -9.3 -4.17556 | opp_overlap 1095572 CAGATGCTCAAGAAA GCCTGGC ACT GCCTGGC GCGTTTCGGCAACCG Rmet_4616 1094773 - 1095618 + | hypothetical protein TERM 755 1095904 - 1095918 + F 70 -4.9 -4.53398 | overlap 1095908 TTAGACACCTTATCG GGGGC AAGCC GCCTC TTGTTTTTCCTCTTC TERM 756 1095908 - 1095921 + F 75 -2.4 -4.88228 | overlap 1095904 ACACCTTATCGGGGG CAAG CCGCCT CTTG TTTTTCCTCTTCCCT Rmet_4617 1095946 - 1098171 + | TonB-dependent siderophore receptor Rmet_4618 1098620 - 1098225 - | hypothetical protein Rmet_4619 1100140 - 1098710 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_4620 1101337 - 1100159 - | secretion protein HlyD Rmet_4621 1101730 - 1101338 - | hypothetical protein TERM 757 1102223 - 1102235 + H 80 -3.3 -5.0809 | overlap 1102203 ACATTGACTGGACAC CGGTG CCG CGCTG TTTTTCTAATTTCTT Rmet_4622 1102330 - 1102788 + | hypothetical protein Rmet_4623 1102898 - 1103146 + | hypothetical protein TERM 758 1103541 - 1103505 - g 74 -10.9 -3.63515 | gap 2 TGGCACGGCCAACAA CGCCCAACGCACGTCGG GCACG CCG-CACGCGT-GGGCG GACAGCCAGCAGGCC TERM 759 1104498 - 1104508 + G 72 -8.2 -4.11404 | overlap 1104486 CTTCGGCCCCGGTCC GCGG GTG CCGC TTTATGTGATCTCGC Rmet_4624 1103179 - 1105416 + | twin-arginine translocation pathway signal Rmet_4625 1105972 - 1105475 - | hypothetical protein TERM 760 1106127 - 1106108 - R 100 -15 -5.63517 | GGCTGAAAGAAAAAA TGCCCGCC GGGG GGCGGGCA AACTGCGAGGTCTTG TERM 761 1106191 - 1106162 - R 75 -8.5 -4.23892 | overlap 1106155 1106180 GGGAAGTACCCAAAA CGGGTGGCAGC AAGAGGAG GCCGTCACCCG TCCCCTTAATAGTGG Rmet_4626 1109252 - 1106301 - | Hpt sensor hybrid histidine kinase Rmet_4627 1109899 - 1109249 - | two component LuxR family transcriptional regulator TERM 762 1110840 - 1110809 - g 71 -12.3 -3.28924 | opp_overlap 1110833 CACCTCGCGGGAGAA CATCGCCGAGCGC GTCAAG GCGCTCACCGATG GCAAGGGTGTGCCGG Rmet_4628 1109958 - 1111196 + | zinc-binding alcohol dehydrogenase TERM 763 1111288 - 1111263 - f 72 -13.3 -2.64155 | opp_overlap 1111263 1111274, overlap 1111260 1111259 GTGTGCTCAAATTGA GGCTCGGGC GGCAGGAT GCCCGAGCC TTCCTGTCTGGTCAG TERM 764 1111263 - 1111288 + F 81 -14 -3.3382 | opp_overlap 1111263 1111260 1111259, overlap 1111274 GTGTGCTCAAATTGA GGCTCGGGCG GCAGGA TGCCCGAGCC TTCCTGTCTGGTCAG Rmet_4629 1111314 - 1112405 + | AraC family transcriptional regulator Rmet_4630 1113527 - 1112466 - | hypothetical protein TERM 765 1113872 - 1113861 - H 72 -2.2 -4.72986 | overlap 1113868 CATCCCCACCAAAAA CCAA CACC CTGG AGACACACCATGAAC Rmet_4631 1113882 - 1114940 + | hypothetical protein Rmet_4632 1115083 - 1116090 + | AraC family transcriptional regulator Rmet_4633 1116977 - 1116135 - | taurine catabolism dioxygenase TauD/TfdA Rmet_4634 1117297 - 1118190 + | DNA/RNA non-specific endonuclease Rmet_4635 1119947 - 1118211 - | sulphate transporter Rmet_4636 1120855 - 1119983 - | hypothetical protein TERM 766 1120268 - 1120227 - G 82 -5.7 -4.72986 | gap 1, overlap 1120231 1120254 GAGTGGCAGGAAAAA CAGACTCGCTGGAAGGTGGC GAA GCCACGCACCACCGGG-CTG TCGGCTGGCAGGTCC Rmet_4637 1121123 - 1121392 + | thiamineS Rmet_4638 1121427 - 1122560 + | hypothetical protein Rmet_4640 1123570 - 1122980 - | hypothetical protein Rmet_4639 1122645 - 1123043 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_4641 1125588 - 1123708 - | ATP-dependent OLD family endonuclease TERM 767 1124255 - 1124243 - G 80 -4.7 -4.77165 | overlap 1124244 CCCTCCACAAGAAAA GCGCG ATT CGCGA AGAGTGCTATGGCAA Rmet_4642 1126332 - 1125802 - | hypothetical protein TERM 768 1126648 - 1126616 - R 100 -10.6 -5.40072 | overlap 1126618 GCCCCCCCAAAAAAA GACCCCAGGCTG TGCAGGTAT CAGCCTGGGGTG GTAGGTCGGGGATCT TERM 769 1126646 - 1126618 - R 100 -13.2 -4.34482 | overlap 1126616 CCCCCCAAAAAAAGA CCCCAGGCTG TGCAGGTAT CAGCCTGGGG TGGTAGGTCGGGGAT TERM 770 1126858 - 1126894 + r 83 -15.9 -3.05816 | overlap 1126849 TGGCGAACGTCGCTG TCGCGCCGGTGTTACGT GTT ACGTAACGCCCGGGCGA TTCGGTACGACATGG Rmet_4643 1127456 - 1126932 - | hypothetical protein Rmet_4644 1128040 - 1127507 - | carboxymuconolactone decarboxylase Rmet_4645 1129105 - 1128059 - | hypothetical protein Rmet_4646 1130069 - 1129116 - | short-chain dehydrogenase/reductase SDR TERM 771 1129884 - 1129912 + g 88 -13.7 -3.85817 | opp_overlap 1129878 1129877 GACGAGAATGCGACG CCCCGCCAGTCGG CCG CCAGCGGGCGGGG TTTGTCCCAGCGCCT TERM 772 1130695 - 1130708 + G 75 -3.7 -4.67982 | overlap 1130693 CTATCAGGAAGGACT GGCCG AGGT CGGGC TTTTATTCGATCCCG Rmet_4647 1130081 - 1131100 + | LacI family transcription regulator Rmet_4648 1132290 - 1131136 - | filamentation induced by cAMP protein Fic TERM 773 1132328 - 1132354 + r 72 -11.7 -3.32647 | opp_overlap 1132326 1132328 1132342 1132343 ACCGCATGGACAAGA TATTCGCCGCA CAAGT TGCGGTGAATA TTGCTGTCATTCCCC Rmet_4649 1133933 - 1132446 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_4650 1134056 - 1134589 + | putative transcriptional regulator TERM 774 1135219 - 1135194 - g 70 -11.1 -3.32997 | gap 1, overlap 1135189 CGGCCAGAAAGCGAA GGC-CAGCGCGG AAG CCGCCCTGCGCC AACTCGATGTGATCG Rmet_4651 1134613 - 1135755 + | secretion protein HlyD Rmet_4652 1135863 - 1137389 + | EmrB/QacA family drug resistance transporter Rmet_4653 1137708 - 1139390 + | amidohydrolase 3 TERM 775 1139429 - 1139479 + T 95 -19.9 -3.04144 | opp_overlap 1139442, overlap 1139442 TGGCGTGATAGCCGT TGCATGGGAAAAAGCCCGCTCTC TTCAC GAGAGCGGGCTTTTTTCTTTGCC TCTTAAACGTCGAAC TERM 776 1139442 - 1139466 + T 100 -17.2 -5.65927 | opp_overlap 1139442, overlap 1139429 GTTGCATGGGAAAAA GCCCGCTCTC TTCAC GAGAGCGGGC TTTTTTCTTTGCCTC TERM 777 1139466 - 1139442 - T 100 -17.2 -4.62069 | opp_overlap 1139442 1139429 GTTGCATGGGAAAAA GCCCGCTCTC TTCAC GAGAGCGGGC TTTTTTCTTTGCCTC Rmet_4654 1139725 - 1139453 - | hypothetical protein Rmet_4655 1139743 - 1141269 + | argininosuccinate lyase TERM 778 1141361 - 1141383 + G 74 -4.8 -4.57353 | GCTCGACCATCATTG GCTCAAGATG ACG CAAGTTGAGC TTTTCTGTGATGAGG Rmet_4656 1141326 - 1141706 + | antibiotic biosynthesis monooxygenase Rmet_4657 1144067 - 1142022 - | diguanylate cyclase/phosphodiesterase TERM 779 1142235 - 1142213 - G 88 -15.6 -3.31144 | TGGCCAGTTGCACAA TGGCCTGCAG TAT CCGCAGGCCA TCCGGCGTATGAGCG Rmet_4658 1144141 - 1144437 + | transposase IS3/IS911 Rmet_4659 1144434 - 1145327 + | integrase catalytic subunit Rmet_4660 1145874 - 1145365 - | hypothetical protein Rmet_4661 1148245 - 1146392 - | sigma 70 (RpoD) TERM 780 1146739 - 1146758 + g 79 -2.1 -5.00616 | opp_overlap 1146741 1146749, overlap 1146741 GTGGTTCTTTGACCA GATCAAG AATCGC CTTGACC TTTTTTACGGAAAGG TERM 781 1147124 - 1147157 + g 70 -2.3 -4.62069 | gap 1 CCTGGCGGCCTGAGC CCTCG-CGCGTGCTTT GGC AACGCGCTGGCCGAGG TTTTTCAGATCGCCA TERM 782 1148270 - 1148257 - R 93 -6.7 -5.1675 | overlap 1148269 TCATGGATGAAAAAA GCTTG CCAG CAAGC GCGGGAGCGCATGCG Rmet_4662 1149402 - 1148242 - | hypothetical protein Rmet_4663 1150277 - 1149462 - | putative spermidine synthase protein TERM 783 1149766 - 1149739 - G 76 -9.2 -4.15044 | gap 1, opp_overlap 1149752 TCGTTCTCCAAGAAA TTGGCGACGA-GG ACG CCATCGTCGGCAA GCCGCGCATGGCAGG Rmet_4664 1150558 - 1150307 - | HPrNtr Rmet_4665 1150677 - 1150898 + | helix-turn-helix protein, CopG Rmet_4666 1151437 - 1150922 - | NADH ubiquinone oxidoreductase, 20 kDa subunit Rmet_4667 1152981 - 1151437 - | NADH-ubiquinone oxidoreductase, chain 49kDa Rmet_4668 1154440 - 1152986 - | hydrogenase 4 subunit F Rmet_4669 1155101 - 1154442 - | hydrogenase 4 membrane component TERM 784 1154727 - 1154682 - G 89 -16.8 -3.23692 | GATCATCATCAGGAA GGACAGCAGCACGCACGCCA GCGCAA TGCCGAGCGTGCCGCTGGCC AGCTTGAGCGACATT Rmet_4670 1156050 - 1155103 - | respiratory-chain NADH dehydrogenase, subunit 1 Rmet_4671 1158085 - 1156061 - | hydrogenase 4 subunit B Rmet_4672 1158373 - 1158089 - | CopG-like DNA-binding TERM 785 1158115 - 1158164 + g 85 -8 -4.59773 | gap 3, overlap 1158111 GGCGAACCGTGCGCC GCCTGGC-GGGCGAAGTCGTATCGC GCT GCGAT--GACTTCTTCCTGGCAGGC TTTTTAGCGGTGGCC TERM 786 1158308 - 1158323 + g 87 -6 -5.08601 | CTGCTGCGCGCACAG GGCCTC GAAG GCGGCC TTTTTATTCGGGTCG TERM 787 1158479 - 1158516 + H 79 -7.7 -4.49556 | gap 1, opp_overlap 1158478 1158479 GGAGCAGAGCAAGAC GCTTTCGCGCAGCGGGCC GGC GACCTGCT-CGTCAAAGC TTTCTTTCGTGCCAG TERM 788 1158547 - 1158562 + H 81 -5.4 -4.72497 | gap 1, overlap 1158547 1158548 AGCCCTCACTCCCAC G-CGTGG CAG CCACGGC TTTTGTTGATCGATC Rmet_4673 1158871 - 1159299 + | hypothetical protein Rmet_4674 1159632 - 1160129 + | hypothetical protein TERM 789 1160257 - 1160232 - T 100 -8.9 -5.39681 | AGAAGCAAAGAAAAA GCCCTCAGGCC GGGA GGAATGAGGGC TGGAAGTGGTAGCAG Rmet_4675 1161214 - 1160402 - | hypothetical protein TERM 790 1160527 - 1160513 - G 81 -12.8 -3.56594 | GGAAAGTGTCGTAAA GCCCGC TTT GCGGGC GATCCGCTCGGCGCG Rmet_4676 1162069 - 1161290 - | 3-oxoadipate enol-lactonase Rmet_4677 1162369 - 1162085 - | muconolactone delta-isomerase Rmet_4678 1163456 - 1162398 - | hypothetical protein TERM 791 1163361 - 1163322 - G 70 -11.5 -3.41839 | gap 1, opp_overlap 1163299 1163298, overlap 1163315 1163360 CAGAGACAGGCAGAA CGT-CTTGCCGCTGCG AATTTCGCG CGCGGCGGCAAGCACG CGGTCCGCGGTAATC Rmet_4679 1163775 - 1163479 - | YciI-like protein Rmet_4680 1165135 - 1163798 - | short chain fatty acid transporter Rmet_4681 1165264 - 1165527 + | hypothetical protein Rmet_4682 1165990 - 1165520 - | DoxX Rmet_4683 1166792 - 1166016 - | hypothetical protein TERM 792 1166335 - 1166316 - G 75 -15 -2.71011 | AGGCGTTTCGAACCA GCGCCAGC GCAC GCTGGCGC ATGGCCGTAGCGCCG Rmet_4684 1167625 - 1166789 - | hypothetical protein TERM 793 1167470 - 1167521 + g 100 -19.4 -3.31144 | gap 1, overlap 1167473 TGCCACCGGATGGCG CTCCCTGATGGCCGTCAG-CCACGC CAG GCGCGGACCGCCGGCCATCAGGTAG TTCTCCGGGTGGACC TERM 794 1167473 - 1167518 + g 93 -19.7 -2.83271 | gap 1, overlap 1167470 CACCGGATGGCGCTC CCTGATGGCCGTCAG-CCACGC CAG GCGCGGACCGCCGGCCATCAGG TAGTTCTCCGGGTGG Rmet_4685 1167941 - 1167657 - | hypothetical protein TERM 795 1168008 - 1168022 + H 73 -10 -3.65522 | GTCCCGCCCGGCCTG CCTTGC GAC GCAAGG TTGTTGGGCTCGGTG Rmet_4686 1168313 - 1168852 + | RNA polymerase sigma factor Rmet_4687 1168849 - 1169490 + | hypothetical protein TERM 796 1171863 - 1171898 + G 74 -10.4 -3.72576 | gap 1, overlap 1171875 TCCGAGCGCGGTGTC TCGCCTGACCGGGCCGG TCA CCGGCTCTGTCAA-CGA TTTCGTGGGCGGGCG Rmet_4688 1169659 - 1173816 + | hypothetical protein Rmet_4689 1173846 - 1178528 + | hypothetical protein TERM 797 1178799 - 1178830 + G 80 -14.4 -3.34233 | gap 1, opp_overlap 1178773 TCGTGCATGGCCACG CGCTTGGC-GGCGCC GAA GGCGCCCGGCAGGCG TTGTCGGACTTCTGG Rmet_4690 1178594 - 1179646 + | patatin Rmet_4691 1179650 - 1181107 + | citrate transporter Rmet_4692 1181720 - 1181142 - | hypothetical protein Rmet_4693 1181988 - 1182635 + | lytic transglycosylase, catalytic Rmet_4694 1183595 - 1182720 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 798 1183193 - 1183224 + g 71 -12.3 -3.29144 | CATACCGCGCCTTGA CCTGCGCATCGGT AATCGG ATCGAGGCGCAGG TTGTCGCGCAGGTAA Rmet_4695 1184355 - 1183648 - | electron transport protein SCO1/SenC Rmet_4696 1186028 - 1184403 - | hypothetical protein TERM 799 1185584 - 1185561 - G 76 -6 -4.57341 | gap 1 AAGGCGCTTCAAAAA GCCGAT-CAGC GCC GCCATATCGGC ATCGTCCAATGCGAA TERM 800 1185948 - 1185923 - G 81 -11.1 -4.07568 | gap 1, overlap 1185924 TGCCCTGCCGGAAAA TCCGCTCGCCAG CGT CTGGCG-GCGGG TCGGCACGGACTAGG TERM 801 1185947 - 1185924 - G 80 -14.6 -3.04398 | gap 1, overlap 1185923 GCCCTGCCGGAAAAT CCGCTCGCCAG CGT CTGGCG-GCGG GTCGGCACGGACTAG Rmet_4697 1186873 - 1186025 - | hypothetical protein Rmet_4698 1187668 - 1186889 - | putative signal peptide protein Rmet_4699 1188205 - 1187717 - | putative transmembrane protein Rmet_4700 1196314 - 1188218 - | putative signal peptide protein TERM 802 1189645 - 1189673 + g 71 -12.4 -3.29471 | gap 1, opp_overlap 1189641 1189640 CCGAGCAGAACGTCA CCCCACC-CGCCG AAGA CGGCGTGGTGGAG TTGATCTCGTCGCCG TERM 803 1191824 - 1191863 + g 76 -6.2 -4.57073 | opp_overlap 1191824 GACTTCCACCACATA CTTGCCCGGGGGCAGCAT CATG GTGCCGTCGCCGGTCGGG TTTTTCACGCAGATC TERM 804 1195290 - 1195266 - G 70 -13.6 -2.50816 | overlap 1195265 1195270 TCCTCAGCGATCAAC GCAACACCGG ACGAG CCGGCGTTGC CGGTCTGGGCACCCA Rmet_4701 1197927 - 1196332 - | multicopper oxidase, type 3 Rmet_4702 1199488 - 1197974 - | multicopper oxidase, type 3 Rmet_4703 1200311 - 1199700 - | hypothetical protein TERM 805 1200261 - 1200233 - G 77 -8.8 -4.26344 | ACAGCGCGATCAAAA GCGACAGCAGGA CCAGC CCCTGCCCTCGC CTGCGACGAAGGCAT Rmet_4704 1200745 - 1200308 - | secretory pathway pseudopilin PulG TERM 806 1200491 - 1200454 - G 80 -14.9 -3.05384 | gap 1 CGTCTGGCGATGCAA CGACCACCCAGTC-GCGG CTG CCGCTGACCGGATCGTCG GGCACATTGCGCAGG Rmet_4705 1201281 - 1200751 - | secretory pathway pseudopilin PulG Rmet_4706 1203489 - 1201285 - | type II and III secretion system protein Rmet_4707 1204098 - 1203490 - | hypothetical protein Rmet_4708 1204661 - 1204095 - | putative transmembrane protein Rmet_4709 1205188 - 1204658 - | putative transmembrane protein Rmet_4710 1206099 - 1205185 - | putative signal peptide protein Rmet_4711 1207786 - 1206080 - | type II secretion system protein E TERM 807 1206534 - 1206495 - G 90 -15.8 -3.53811 | gap 1, opp_overlap 1206488 CCCATGTTCGTGAAA CGACCGATCACGTCGAACA CGT TGTTCG-CGTGGACGGTCG TGAACACCTGGTGTC TERM 808 1206727 - 1206755 + g 70 -8.1 -4.0641 | ACTCGACCGGGTCCT CGATGGTCACGAT CTT GTCCAGACCATCG TTTATCTCGGTCAGG Rmet_4712 1209034 - 1207793 - | type II secretion system protein Rmet_4713 1209539 - 1209039 - | general secretion pathway protein G Rmet_4714 1209646 - 1210989 + | putative PAS/PAC sensor protein Rmet_4715 1211824 - 1211030 - | two component LuxR family transcriptional regulator TERM 809 1211896 - 1211879 - R 71 -7 -4.24204 | opp_overlap 1211877 1211879 CATCCACATTGAAAA CGTGTC CGAGGC GACACG TATTTCAACGCGGGG Rmet_4716 1212880 - 1212434 - | hypothetical protein Rmet_4717 1213522 - 1212941 - | hypothetical protein Rmet_4718 1213711 - 1214619 + | hypothetical protein Rmet_4719 1214603 - 1215370 + | AraC family transcriptional regulator TERM 810 1215389 - 1215407 + F 72 -12.4 -3.01712 | overlap 1215384 GCAGATTTCTCCCGC CGCGCGTA TGA TGCGCGCG TGTTCGAGCCAGCGA Rmet_4720 1215451 - 1216551 + | hypothetical protein Rmet_4721 1216850 - 1217275 + | hypothetical protein TERM 811 1217350 - 1217368 + T 74 -13.1 -3.14132 | overlap 1217346 ATCACCCTTTTGCGC CCGGCCC CTTGT GGGCCGG TTCGTGCGGCACAGG Rmet_4722 1218072 - 1217557 - | putative lipoprotein TERM 812 1218269 - 1218298 + r 100 -14.3 -5.75342 | AGACTCAGGCTTCAC GATGCCACGCGGT CCCC GCCCCGTGGCATC TTTTTTTTACAGGCC Rmet_4723 1218997 - 1218305 - | TetR family transcriptional regulator TERM 813 1218633 - 1218617 - G 77 -11.5 -3.76952 | CTCACCCAAGGCAAA GCGCAGG TAG CCCGCGC CTACCGCCCGCAGGC cls 1220624 - 1219107 - | cardiolipin synthetase Rmet_4725 1220864 - 1221649 + | two component transcriptional regulator Rmet_4726 1223700 - 1221670 - | diguanylate cyclase/phosphodiesterase Rmet_4727 1223803 - 1225407 + | methyl-accepting chemotaxis sensory transducer Rmet_4728 1225532 - 1225795 + | hypothetical protein Rmet_4729 1226130 - 1226780 + | hypothetical protein TERM 814 1226854 - 1226833 - T 100 -15.9 -4.22927 | opp_overlap 1226833 GCAGCAAGAGACAAA GGGCCGCAA GCAA TTGCGGCCC TTTTTTCATTGGCTT TERM 815 1226833 - 1226854 + T 100 -15.9 -5.29385 | opp_overlap 1226833 GCAGCAAGAGACAAA GGGCCGCAA GCAA TTGCGGCCC TTTTTTCATTGGCTT Rmet_4730 1227603 - 1226926 - | hypothetical protein TERM 816 1228321 - 1228294 - g 93 -16.3 -3.8709 | AAATCGTGGGACAAA CGCCAGCCGAC TACCTG GCCGGCTGGCG TATCAGCCTTGCACA Rmet_4731 1227612 - 1228481 + | AraC family transcriptional regulator Rmet_4732 1228755 - 1229579 + | IclR family transcriptional regulator Rmet_4733 1229611 - 1230045 + | 5-carboxymethyl-2-hydroxymuconate isomerase Rmet_4734 1231704 - 1230112 - | galactarate dehydratase Rmet_4735 1233082 - 1231721 - | D-galactonate transporter Rmet_4736 1233502 - 1234416 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 817 1234450 - 1234467 + T 100 -11.3 -5.76949 | opp_overlap 1234452 TTGAGAGTTTGGACA GAGCCGA TTCG TCGGCTC TTTTTTTTGCGCGTC TERM 818 1234501 - 1234523 + T 86 -14.9 -3.36175 | opp_overlap 1234501 AAATTAAAAAAAAAA CGCCAACCC GCGAA GGGTTGGCG TTCTGCCTGAAGCTT TERM 819 1234523 - 1234501 - T 100 -14.9 -6.50278 | opp_overlap 1234501 AAATTAAAAAAAAAA CGCCAACCC GCGAA GGGTTGGCG TTCTGCCTGAAGCTT Rmet_4737 1236139 - 1234559 - | isocitrate lyase TERM 820 1235609 - 1235642 + g 72 -6.8 -4.2828 | gap 1, opp_overlap 1235589, overlap 1235617 GTCGATGTCGGCGAT GATGGGCA-CCACGT GGGTG ACGTGGTTGTCGATC TTTTCCTGGATGGCG Rmet_4738 1236707 - 1237132 + | cupin 2, barrel TERM 821 1237232 - 1237193 - T 70 -12.6 -2.86271 | overlap 1237190 CGGCGACTACAACCA CCGCCAGATGCCCGCCGC AATC GCGGCGAGCGGCAGGTGG GCCCAGGTCGCCGCG Rmet_4739 1237876 - 1237184 - | NnrU Rmet_4740 1237964 - 1238470 + | GCN5-related N-acetyltransferase Rmet_4741 1238710 - 1239702 + | 2OG-Fe(II) oxygenase TERM 822 1239742 - 1239764 + T 82 -12.6 -3.59979 | opp_overlap 1239742 CCGCCCAACAAAAAA CCCCGGGCCT TTC GGGCACGGGG TTTCAAGTCGCCCGG TERM 823 1239764 - 1239742 - T 100 -11.9 -5.4505 | opp_overlap 1239742 CCGCCCAACAAAAAA CCCCGGGCC TTTCG GGCACGGGG TTTCAAGTCGCCCGG Rmet_4742 1240519 - 1239827 - | histone-like DNA-binding protein TERM 824 1240178 - 1240190 + g 71 -10.5 -3.61398 | GGGAGCAGCCTTCTT GGCCG GAG CGGCC TTCTTGGCAGCAGCC TERM 825 1240531 - 1240544 + r 79 -9.5 -4.17023 | overlap 1240527 GCATTCCGCGAGCGT CGCGC GACG GCGCG TTTTCGGGTCATTCA Rmet_4743 1241054 - 1240557 - | hypothetical protein TERM 826 1241101 - 1241113 + H 70 -10.5 -3.44229 | CAAGGTTCGCATCGC GGCCG TTG CGGCC TTATAGTAGTCACGT Rmet_4744 1241197 - 1242075 + | N-acetyltransferase Rmet_4745 1242265 - 1243029 + | short-chain dehydrogenase/reductase SDR TERM 827 1244843 - 1244823 - g 79 -10.5 -4.19506 | ATCCGAACGGGAAAA TCCTGAAGT CGA ACCTCAGGA AGCTGTTCGCGGCTT Rmet_4746 1243055 - 1244860 + | AMP-dependent synthetase and ligase Rmet_4747 1245402 - 1244926 - | CreA Rmet_4748 1245919 - 1245410 - | thioesterase superfamily protein TERM 828 1246022 - 1246006 - R 100 -11.5 -5.18371 | opp_overlap 1246006 TCCGACAAAAGAAAA GCGGCCC CTC AGGCCGC TTTCTTTGCTTCTCA TERM 829 1246006 - 1246022 + r 89 -10.8 -4.59982 | opp_overlap 1246006 TCCGACAAAAGAAAA GCGGCC CCTCA GGCCGC TTTCTTTGCTTCTCA Rmet_4749 1246331 - 1246050 - | HU family DNA-binding protein TERM 830 1246789 - 1246809 + H 70 -3.9 -4.62872 | opp_overlap 1246784 1246774, overlap 1246784 1246780 1246805 CGCCATCCAAGTGCG CCACGCA CTGAGTT TGCGCGG TTTTTCGGCGTTCAT Rmet_4750 1246883 - 1248085 + | Rh-like protein/ammonium transporter TERM 831 1248117 - 1248148 + F 100 -16 -4.1891 | opp_overlap 1248118 1248123, overlap 1248118 1248123 1248147 CTCGAATCGCCCCAA ATAAAACGGCCGGA ATCA TCCGGCCGTTTTAC TTTGTGTTCACAAAG TERM 832 1248147 - 1248118 - f 100 -19.5 -3.55622 | opp_overlap 1248118 1248117 1248123, overlap 1248123 TCGAATCGCCCCAAA TAAAACGGCCGGA ATCA TCCGGCCGTTTTA CTTTGTGTTCACAAA TERM 833 1248118 - 1248147 + F 90 -19.5 -3.11024 | opp_overlap 1248118 1248123, overlap 1248117 1248123 TCGAATCGCCCCAAA TAAAACGGCCGGA ATCA TCCGGCCGTTTTA CTTTGTGTTCACAAA TERM 834 1248142 - 1248123 - f 100 -15 -4.86731 | opp_overlap 1248123 1248118 1248117, overlap 1248118 TCGCCCCAAATAAAA CGGCCGGA ATCA TCCGGCCG TTTTACTTTGTGTTC TERM 835 1248123 - 1248142 + F 100 -15 -4.67563 | opp_overlap 1248118 1248123, overlap 1248118 1248117 TCGCCCCAAATAAAA CGGCCGGA ATCA TCCGGCCG TTTTACTTTGTGTTC TERM 836 1248894 - 1248913 + G 71 -9.2 -3.72576 | CTTGCCGGGTCGACG GACGTGGC AGCC GCCACGGC TTTGCTCAAGGAAAA Rmet_4751 1248327 - 1249193 + | MscS mechanosensitive ion channel Rmet_4752 1250504 - 1249224 - | Bcr/CflA subfamily drug resistance transporter Rmet_4753 1250615 - 1251289 + | hypothetical protein TERM 837 1251514 - 1251493 - T 100 -15.9 -5.38054 | opp_overlap 1251493 CCGGACAAACAAAAA CGGCAGGCT TCAA AGCCTGCCG TTTTTGATTCCAGCG TERM 838 1251493 - 1251514 + T 100 -15.9 -4.8622 | opp_overlap 1251493 CCGGACAAACAAAAA CGGCAGGCT TCAA AGCCTGCCG TTTTTGATTCCAGCG Rmet_4754 1254010 - 1251539 - | glucosyltransferase MdoH mdoG 1255884 - 1254118 - | glucan biosynthesis protein G Rmet_4756 1256154 - 1256555 + | hypothetical protein Rmet_4757 1257228 - 1256638 - | putative transmembrane protein Rmet_4758 1258037 - 1257351 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 839 1258356 - 1258324 - g 86 -15.6 -3.1855 | gap 1, overlap 1258342 GCCCTGAAGACGTAA CGATGCCGCCGCGAG AGAC CTCGCAGCGGC-CCG AGGATCTTAGCACGA Rmet_4759 1258083 - 1258385 + | hypothetical protein TERM 840 1258366 - 1258377 + T 91 -5.8 -5.37865 | GGCCCGAGGATCTTA GCAC GACT GTGC TTTTTTAGTTGTTCA Rmet_4760 1259280 - 1258390 - | XRE family transcriptional regulator Rmet_4761 1259590 - 1259808 + | hypothetical protein TERM 841 1260176 - 1260164 - g 87 -5.5 -5.00616 | CCTGCCGGCAAAAAA CGCCA TCC TGACG AAGAACTGTCACCCA TERM 842 1260266 - 1260250 - g 80 -8.7 -4.3534 | opp_overlap 1260260, overlap 1260259 CCGCAACTACGAAAA GCAGAAG TAC CTCCTGC AGGTGGAGTTGCTGA Rmet_4762 1259810 - 1260961 + | hypothetical protein TERM 843 1260990 - 1261011 + F 100 -17.3 -4.13767 | GCGGCGGCCTCGGAA CGCCCACCG TTAC CGGTGGGCG TTTTCGCATCCACGA Rmet_4763 1261138 - 1261422 + | plasmid maintenance system killer Rmet_4764 1261432 - 1261779 + | XRE family plasmid maintenance system antidote protein TERM 844 1262742 - 1262712 - g 72 -8.3 -4.07568 | gap 2, opp_overlap 1262712 1262711 1262709, overlap 1262713 CCTGCGCGGCGAAAA GGCCGAGCTGACAGC CGT GCTG-CAGC-CGGCG GTATTTGTGCCCGAA Rmet_4765 1261894 - 1263207 + | hypothetical protein TERM 845 1263262 - 1263291 + F 70 -12.3 -2.94232 | opp_overlap 1263268, overlap 1263268 ATTTCGATTGATCGA TCAAAACGGACAC TTCG GTGTCCGTTTTCA CTTGTTTCAAGCCGA TERM 846 1263268 - 1263285 + F 93 -11.3 -4.39407 | opp_overlap 1263268, overlap 1263262 ATTGATCGATCAAAA CGGACAC TTCG GTGTCCG TTTTCACTTGTTTCA TERM 847 1263285 - 1263268 - f 89 -11.3 -4.28548 | opp_overlap 1263262 1263268 ATTGATCGATCAAAA CGGACAC TTCG GTGTCCG TTTTCACTTGTTTCA TERM 848 1264090 - 1264059 - g 71 -12.4 -3.19192 | gap 1, overlap 1264044 CGCCACCGAACGCAA TCTGCAGCA-GGCGT TCG ATGCCATGCTGCAGA TCAACAGGCGTGGCG Rmet_4766 1263607 - 1264944 + | diguanylate cyclase/phosphodiesterase Rmet_4767 1265089 - 1265217 + | entericidin EcnAB TERM 849 1265254 - 1265281 + T 100 -14.2 -4.87626 | opp_overlap 1265259, overlap 1265259 TCCAACTGAAGCATG AAAAAGGGGCGC TCGT GCGCCCCTTTTC TTTTTCCTGTTGCGG TERM 850 1265276 - 1265259 - T 100 -14.1 -4.81083 | opp_overlap 1265254 1265259 CTGAAGCATGAAAAA GGGGCGC TCGT GCGCCCC TTTTCTTTTTCCTGT TERM 851 1265259 - 1265276 + T 100 -14.1 -5.32396 | opp_overlap 1265259, overlap 1265254 CTGAAGCATGAAAAA GGGGCGC TCGT GCGCCCC TTTTCTTTTTCCTGT Rmet_4768 1265977 - 1265336 - | 2-keto-3-deoxy-phosphogluconate aldolase Rmet_4769 1267016 - 1266081 - | PfkB Rmet_4770 1268345 - 1267074 - | D-serine deaminase (D-serine dehydratase) TERM 852 1268679 - 1268725 + G 71 -9.6 -3.72576 | gap 3, opp_overlap 1268691 1268706 GGTTGCCGCGACGTC CGCGATCTGAAACTGCGCCTGGC ACAA GCCACG-GCAGT--CGGATCGCG TTTCCTGCAACCGGC Rmet_4771 1268478 - 1269383 + | RpiR family transcriptional regulator TERM 853 1270391 - 1270415 + G 85 -17.1 -2.91912 | CTGCTTGAGGCGGCA CGGCGCCTGCA GCC TGCCGGCGCCG TCTATCACTGCATGG Rmet_4772 1269386 - 1270849 + | amidohydrolase 3 Rmet_4773 1270864 - 1271256 + | endoribonuclease L-PSP TERM 854 1271269 - 1271245 - f 74 -6.9 -4.30987 | opp_overlap 1271266, overlap 1271246 ATCGCTTACAAGAAA CCGGCGGCCTG AAC CCGGCCGGCGT GGACGTGGTCGGCGA TERM 855 1271344 - 1271371 + F 79 -8.4 -4.56597 | CAGCTTTCTCAACCC GCCGCTACGC GACACAAG GCATAGCGGC TTTTTCACACGCGGA Rmet_4774 1271430 - 1272791 + | gluconate transporter Rmet_4775 1272926 - 1274107 + | extracellular ligand-binding receptor Rmet_4776 1274612 - 1274145 - | GCN5-related N-acetyltransferase TERM 856 1275315 - 1275288 - g 93 -17.2 -3.5399 | overlap 1275302 1275303 ACCACACGGATATAA GACGATTCCGAA AACG TTCGGAATCGTC CGAGCACTAATGCGA Rmet_4777 1274801 - 1275325 + | hypothetical protein Rmet_4778 1276047 - 1275346 - | ABC transporter related Rmet_4779 1276792 - 1276040 - | ABC transporter related Rmet_4780 1277784 - 1276789 - | inner-membrane translocator Rmet_4781 1278647 - 1277781 - | inner-membrane translocator TERM 857 1278316 - 1278281 - G 72 -12.7 -3.05294 | gap 2 GGAAATCCGGCAATA CCACG-GGCTGCT-GGC CCGG GCCGAACAGCCACGTGG CGCCCGCCATCGCCA TERM 858 1279722 - 1279670 - g 77 -13.5 -3.31248 | overlap 1279661 1279674 CAATATGCTCGACAA CGCAGGCG-CCGCGTTCGGGCGGAT GCCCG ATACGCCCGAACGCGCCCGCAT-CG CAGCGGCGCTGGCCT TERM 859 1279716 - 1279674 - g 74 -15 -2.5955 | gap 2, overlap 1279661 1279670 ATGCTCGACAACGCA GGCGCCGCGTTCGGGCGGAT GCCCG ATACGCCCGAACGC-GC-CC GCATCGCAGCGGCGC Rmet_4782 1278816 - 1279739 + | twin-arginine translocation pathway signal Rmet_4783 1279779 - 1281140 + | major facilitator transporter TERM 860 1281121 - 1281157 + F 100 -22.3 -2.62933 | overlap 1281147 CTGTACTCGCCCGGG GCCAGACCGGCAGCCGA TAA TCGCCCGCCGGTCTGGC TCGTGTGCGCGGTTC Rmet_4784 1281251 - 1282357 + | zinc-binding alcohol dehydrogenase Rmet_4785 1282369 - 1283217 + | putative esterase TERM 861 1283252 - 1283221 - T 73 -13.7 -2.72661 | opp_overlap 1283225 GAGCAGCTTTAAGGA CTGATGCCGGCGC ATCCCG GCGCCGGCATCCA TTCACGCCTGAATCC TERM 862 1283225 - 1283248 + T 76 -15.3 -2.52896 | opp_overlap 1283221 AGCTTTAAGGACTGA TGCCGGCGC ATCCCG GCGCCGGCA TCCATTCACGCCTGA Rmet_4786 1283584 - 1283270 - | cold-shock protein, DNA-binding Rmet_4787 1283694 - 1285211 + | amidase Rmet_4788 1285931 - 1285266 - | NADPH-dependent FMN reductase TERM 863 1285940 - 1285922 - G 100 -13.8 -4.72846 | GGATAGATGCAAAAA CGGCGACC ATT GGCCGCCG TTCCGCATCAAGCCA Rmet_4789 1286981 - 1286169 - | lipoprotein YaeC Rmet_4790 1288703 - 1287213 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_4791 1289686 - 1288700 - | secretion protein HlyD TERM 864 1288769 - 1288790 + g 86 -15.1 -3.5365 | overlap 1288755 CTGCGAGGCACTACG GCCGGCCGC CGGC GCGGTCGGC TTGTCTCCCGTTTCC Rmet_4792 1289895 - 1289683 - | hypothetical protein Rmet_4793 1291871 - 1289892 - | fusaric acid resistance protein region Rmet_4794 1292335 - 1291877 - | MarR family transcriptional regulator Rmet_4795 1292366 - 1293037 + | hypothetical protein Rmet_4796 1293333 - 1296068 + | Rhs element Vgr protein TERM 865 1299953 - 1299997 + G 89 -13.5 -3.96216 | overlap 1299954 GACGCGTTCGGGCGA CGCACGCTCAAGGCGGTCG AGCGGGC CGGCCGCCTTGAGCGCACC TTCTTTACGTGGGAC TERM 866 1299954 - 1299996 + G 85 -17 -2.97408 | overlap 1299953 ACGCGTTCGGGCGAC GCACGCTCAAGGCGGTCG AGCGGGC CGGCCGCCTTGAGCGCAC CTTCTTTACGTGGGA Rmet_4797 1296119 - 1300999 + | YD repeat-containing protein Rmet_4798 1301011 - 1301259 + | hypothetical protein TERM 867 1301250 - 1301239 - f 74 -5.8 -4.50241 | AAAGAGCAACTAAAA CCCT TGTC AGGG AGCGAATAAATTCTG Rmet_4799 1301802 - 1302335 + | hypothetical protein TERM 868 1302355 - 1302385 + G 77 -8.3 -4.20696 | opp_overlap 1302355, overlap 1302356 1302359 GCCTGTGCCAAGAGA TGCATCGACACTG TGGCC CAGTGTCGGTACG TTTTACGGTTCGTGG Rmet_4800 1302332 - 1302781 + | hypothetical protein Rmet_4801 1302813 - 1303079 + | PAAR TERM 869 1303415 - 1303471 + G 79 -11.7 -3.84451 | overlap 1303415 CGCCGTGCTTTTCCT G-GCCGTGCGGGCAA-CTCGGGACACCGG CAT CCGGA--CCTGAGCTTTCCCGCACGGCAC TTTGCATTTGGACGC Rmet_4802 1303340 - 1303603 + | hypothetical protein Rmet_4803 1303619 - 1304242 + | hypothetical protein Rmet_4804 1305261 - 1304260 - | L-threonine 3-dehydrogenase Rmet_4805 1306460 - 1305258 - | 2-amino-3-ketobutyrate coenzyme A ligase Rmet_4806 1306554 - 1307165 + | XRE family transcriptional regulator Rmet_4807 1307451 - 1307735 + | hypothetical protein TERM 870 1307763 - 1307799 + T 70 -10.1 -3.524 | gap 1, overlap 1307763 AGCCCCCGGGTACCT GG-GCCGGCATCATCG CACCGA CGCTGCTGCCGGCACC TTGTATCCATCCGTC Rmet_4808 1309139 - 1307772 - | di-haem cytochrome c peroxidase Rmet_4809 1309379 - 1311508 + | phosphoesterase TERM 871 1311538 - 1311575 + F 100 -23.5 -3.10796 | opp_overlap 1311509 1311543, overlap 1311543 CATTGCCTTCGCGCT GAAAAGGGGGCGGCTCC ACGA GGGGCCGCCCCCTTGTC TATTGGATGGTCGAA TERM 872 1311543 - 1311570 + F 100 -22 -3.69482 | opp_overlap 1311543, overlap 1311538 CCTTCGCGCTGAAAA GGGGGCGGCTCC ACGA GGGGCCGCCCCC TTGTCTATTGGATGG TERM 873 1311570 - 1311543 - f 100 -19.8 -4.07568 | opp_overlap 1311538 1311543 CCTTCGCGCTGAAAA GGGGGCGGCTCC ACGA GGGGCCGCCCCC TTGTCTATTGGATGG Rmet_4810 1311582 - 1313126 + | major facilitator transporter Rmet_4811 1313142 - 1313438 + | hypothetical protein Rmet_4812 1313435 - 1313737 + | hypothetical protein Rmet_4813 1314762 - 1314043 - | short-chain dehydrogenase/reductase SDR TERM 874 1314987 - 1314967 - g 87 -7.6 -4.77173 | gap 1, opp_overlap 1314969 1314983, overlap 1314971 CGCGCATAAAACAAA GCGACAGCC TGCT GGCTGT-GC TGGCCCTGATCGGCT TERM 875 1315122 - 1315132 + G 72 -8.2 -4.16943 | overlap 1315116 CTGATCTGCGTCTGG CGCC CCT GGCG TTTTCCGCTCTCCGG TERM 876 1315536 - 1315561 + G 70 -11.1 -3.3771 | overlap 1315534 TTCGGACTGGGCCAC GCCGGACTGGA GATG TTCAGCCCGGC TCTTCTGCTTTCCGG Rmet_4814 1314942 - 1315808 + | hypothetical protein Rmet_4815 1316410 - 1315805 - | GCN5-related N-acetyltransferase Rmet_4816 1316472 - 1316969 + | putative transcriptional regulator TERM 877 1317260 - 1317217 - f 72 -13.8 -2.64099 | gap 1, opp_overlap 1317217, overlap 1317216 CGCCGGCAGGACAAC GGCGTCCCCAGAA-CTGGCCC ATC GGGTCGGACTCTCGGGACGCC TTTTGGTTTTGGAGC TERM 878 1317217 - 1317260 + F 100 -16 -4.67038 | gap 1, opp_overlap 1317216 1317217 CGCCGGCAGGACAAC GGCGTCCCCAGA-ACTGGCCC ATC GGGTCGGACTCTCGGGACGCC TTTTGGTTTTGGAGC Rmet_4817 1317282 - 1318595 + | major facilitator transporter TERM 879 1320078 - 1320048 - g 85 -4.7 -4.98531 | gap 1, overlap 1320049 1320052 1320069 1320072 GGCGGAAATGAAAAA GCAAGGCATGGCCG TGAA CAACCATGTCT-GC GAGCACTTTCCGTAC Rmet_4818 1318633 - 1321194 + | assimilatory nitrite reductase (NAD(P)H) large subunit precursor Rmet_4819 1321220 - 1321621 + | assimilatory nitrite reductase (NAD(P)H) small subunit TERM 880 1321924 - 1321969 + G 70 -13.9 -2.53263 | gap 1, opp_overlap 1321953, overlap 1321928 CATGGCATCGAGTTG CTGGCCGGCG-ATCCGGTCGTT GCA ATCGACCGGCCGCGCCGGCTGG TGCGTTCCGCGTCCG Rmet_4820 1321675 - 1322916 + | assimilatory nitrate reductase (NADH) beta subunit TERM 881 1323579 - 1323557 - g 75 -6.9 -4.34402 | overlap 1323559 GCCCCGAGATGAAAA TCGTCGCGA TCGAC CCGCGTCGA ACCGCCACCTGCGAA Rmet_4821 1322935 - 1325682 + | assimilatory nitrate reductase (NADH) alpha subunit apoprotein TERM 882 1325702 - 1325730 + T 100 -15.2 -4.5123 | opp_overlap 1325689 1325702 TACGCAGACGACAAA GGCGCGGCGGGC CATGT GTCCTCCGCGCC TTTCTTTCGTCCGTT TERM 883 1325730 - 1325702 - T 89 -13 -4.02334 | opp_overlap 1325702, overlap 1325689 TACGCAGACGACAAA GGCGCGGCGGGC CATGT GTCCTCCGCGCC TTTCTTTCGTCCGTT TERM 884 1325830 - 1325867 + T 78 -14.1 -3.17051 | opp_overlap 1325833, overlap 1325827 1325831 TCTCGACAGCGGAAC TGACGGTGAGCGCTTCC CGCT GGAGGCCCTCACCGCCG TCTTCATCCTCGGCC TERM 885 1325831 - 1325866 + T 78 -15.4 -2.50016 | opp_overlap 1325833, overlap 1325830 1325827 CTCGACAGCGGAACT GACGGTGAGCGCTTCC CGCT GGAGGCCCTCACCGCC GTCTTCATCCTCGGC TERM 886 1325864 - 1325833 - T 76 -14.4 -2.54523 | opp_overlap 1325831 1325830 1325827 CGACAGCGGAACTGA CGGTGAGCGCTTCC CGCT GGAGGCCCTCACCG CCGTCTTCATCCTCG TERM 887 1325906 - 1325924 + T 82 -8.8 -4.34488 | CTGCAGCCGCTGCAT TTGCCCGC GCG GCGTGCAA TTTCTTGTAGCTGTC Rmet_4822 1328087 - 1325883 - | hypothetical protein Rmet_4823 1328631 - 1329257 + | hypothetical protein TERM 888 1329878 - 1329860 - g 71 -13.8 -2.71731 | opp_overlap 1329869 1329870 GCGACGTGGTAATCA CCGCCACC CCG GGCGGCGG CCCCTTGTTCGACGC Rmet_4824 1329247 - 1330227 + | ornithine cyclodeaminase Rmet_4825 1330251 - 1331219 + | serine/threonine dehydratase TERM 889 1331255 - 1331277 + T 73 -13.4 -2.71731 | AACGTCAGGCACTCG GGCCGGGAAT CGC ATCCCCGGCC TGCTTCAAACCTCCC Rmet_4826 1332736 - 1331282 - | EmrB/QacA family drug resistance transporter TERM 890 1332698 - 1332650 - G 86 -13.9 -3.71848 | CGTCTGCATGAAGAA GCCCACCG-CCACCACCCACAGC ATGAA GC-GCAGGCGGCGGTCGATGGGC ATCGTGGACGGGTGG TERM 891 1332892 - 1332852 - R 80 -10.4 -4.11216 | gap 2, opp_overlap 1332834 1332854 1332881, overlap 1332853 CCGGCATCCCGAAAA CCGGGGCCCGGCAG-CC-TC TTT GATGGCCTGCCGCACCCCGT CCGGGGCGACGCTCA TERM 892 1332891 - 1332853 - R 76 -13.9 -3.06515 | gap 2, opp_overlap 1332834 1332854 1332881, overlap 1332852 CGGCATCCCGAAAAC CGGGGCCCGGCAG-CC-TC TTT GATGGCCTGCCGCACCCCG TCCGGGGCGACGCTC Rmet_4827 1333963 - 1332905 - | hypothetical protein Rmet_4828 1335759 - 1334032 - | glycosyl transferase family protein TERM 893 1335847 - 1335824 - H 74 -6.7 -4.38712 | gap 1 GCCATGCCCAGAAAA GCCGGCGCTC GCGAT GA-CACCGGC TAAAAATAGCGCGCA Rmet_4829 1335998 - 1336705 + | two component transcriptional regulator TERM 894 1336902 - 1336880 - g 74 -10.4 -3.70902 | overlap 1336881 GCGTGCATACGCAAA CCTCGCCGGC GCC GCCGGCGGCG AACGGGCCGATCCCC Rmet_4830 1336702 - 1338075 + | histidine kinase Rmet_4831 1338124 - 1339350 + | chromate transporter Rmet_4832 1339331 - 1340008 + | hypothetical protein TERM 895 1340382 - 1340357 - f 100 -14.1 -4.41348 | overlap 1340359 CGGTCCGGAAACAAA TAGAGCCGTCT CGGA AGACGGCTCCA TGCCCCGCGTACTTT TERM 896 1340380 - 1340359 - f 93 -14.5 -3.81557 | overlap 1340357 GTCCGGAAACAAATA GAGCCGTCT CGGA AGACGGCTC CATGCCCCGCGTACT TERM 897 1340591 - 1340609 + F 71 -7.4 -4.22375 | overlap 1340592 AGCCTGATACCGCAC ACGTGGAT CAG ATCCACGC TTATTTCTGTTGCGT Rmet_4833 1340685 - 1340999 + | hypothetical protein TERM 898 1341061 - 1341016 - T 84 -11.8 -4.07687 | opp_overlap 1341023, overlap 1341023 AGCCCCCGCTGAAAA CGAAGAACGCCCCTGGGCCG CCAAGT CGGTCCAGGGGCGTTTTTTT ATCCGGCAGGACGGG TERM 899 1341054 - 1341023 - T 100 -18.7 -3.965 | opp_overlap 1341023, overlap 1341016 GCTGAAAACGAAGAA CGCCCCTGGGCCG CCAAGT CGGTCCAGGGGCG TTTTTTTATCCGGCA TERM 900 1341023 - 1341054 + T 100 -20.9 -5.60993 | opp_overlap 1341023 1341016 GCTGAAAACGAAGAA CGCCCCTGGGCCG CCAAGT CGGTCCAGGGGCG TTTTTTTATCCGGCA Rmet_4834 1342187 - 1341126 - | porin TERM 901 1341608 - 1341579 - G 70 -11.4 -3.35679 | gap 1, opp_overlap 1341599 GGTGCCGACCGAGAA GGCGCCGGCGGTG TAGGC CAG-GCCGGCGCC GAATGCGCGACCAGC TERM 902 1342578 - 1342627 + G 80 -14.9 -3.05727 | gap 1 TTTGCGCCGTCCCAC GCGGCGCGAG-GTCGTGCTGGCGG TGG CCGCCATCCCGGCGCTGGTGCTGC TCTATATCCTGTTGC TERM 903 1342757 - 1342730 - g 73 -9.8 -3.91911 | CCGACGGCAAGGAAA TCGCGGTCTACC GCTG GGCCAACCGCGA CTGGGTCAAGCTTTC Rmet_4835 1342504 - 1344984 + | glycosyl transferase family protein Rmet_4836 1345776 - 1345012 - | diguanylate phosphodiesterase Rmet_4837 1347268 - 1345976 - | twin-arginine translocation pathway signal Rmet_4838 1348867 - 1347287 - | hypothetical protein TERM 904 1347447 - 1347432 - G 79 -10.4 -4.13767 | TTCGGCATCGGAAAA CCACGC CGCT GCGTGG GTTGGCCATCCTCGC Rmet_4839 1349163 - 1350239 + | LacI family transcription regulator TERM 905 1350551 - 1350496 - g 70 -7.5 -4.03219 | gap 3, opp_overlap 1350508 ACTCGACAACAAGAA CTCCGGCCA-GTCGCTGGCGCAGCT-GG TTG CCGAGC-GCGCCAGCCCGGTGGCCGACG TGACCTACTTGGGCG Rmet_4840 1350302 - 1351324 + | putative periplasmic solute-binding protein Rmet_4841 1351348 - 1352166 + | binding-protein-dependent transport systems inner membrane component Rmet_4842 1352300 - 1353175 + | binding-protein-dependent transport systems inner membrane component Rmet_4843 1353168 - 1354226 + | ABC transporter related Rmet_4844 1354223 - 1355095 + | metallophosphoesterase Rmet_4845 1355217 - 1356002 + | hypothetical protein Rmet_4846 1356162 - 1357217 + | TRAP dicarboxylate transporter- DctP subunit Rmet_4847 1357451 - 1359154 + | YidE/YbjL duplication Rmet_4848 1359642 - 1359250 - | alkylphosphonate utilization operon protein PhnA Rmet_4849 1359796 - 1360689 + | hypothetical protein Rmet_4850 1361686 - 1360736 - | LysR family transcriptional regulator Rmet_4851 1361777 - 1363015 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4852 1363015 - 1364025 + | zinc-binding alcohol dehydrogenase Rmet_4853 1364082 - 1365026 + | hypothetical protein TERM 906 1365085 - 1365061 - f 100 -10.8 -5.44119 | gap 1 CCGAGGCCAAAAAAA TACCCGCTGCC GGGT GG-AGCGGGTA CTCAAAGTGGTATGG TERM 907 1365201 - 1365161 - f 77 -12 -3.61517 | gap 1, overlap 1365181 ACGCGTTGCCAATAA TCTTTCCGG-ACTACCCCA AATG CGGGGCAACGCCGGAAAGA CAGCCGGGGGGTAAG Rmet_4854 1365282 - 1365917 + | two component LuxR family transcriptional regulator Rmet_4855 1365930 - 1367705 + | periplasmic sensor hybrid histidine kinase Rmet_4856 1367862 - 1369313 + | aldehyde dehydrogenase (acceptor) TERM 908 1369377 - 1369403 + T 100 -13.1 -4.37886 | gap 1 CGTGCGCATGACGCA TCCCCGCCCGAT TCAC AT-GGGCGGGGA TTTTGTCGCAGATAC Rmet_4857 1369593 - 1369426 - | hypothetical protein Rmet_4858 1369952 - 1370167 + | hypothetical protein TERM 909 1370250 - 1370196 - T 81 -7.8 -4.65895 | opp_overlap 1370210, overlap 1370210 CCTCGGATCCAAAAA CCATAAAGAACAAAGCGGGAAGGCAG TAT CTGCCTTCCCGCTTTTACGTTCCCTG CCAGCTGCTCAAAGG TERM 910 1370210 - 1370236 + T 100 -22.4 -4.28774 | opp_overlap 1370210 1370196 ACCATAAAGAACAAA GCGGGAAGGCAG TAT CTGCCTTCCCGC TTTTACGTTCCCTGC TERM 911 1370236 - 1370210 - T 100 -22.4 -4.63952 | opp_overlap 1370210, overlap 1370196 ACCATAAAGAACAAA GCGGGAAGGCAG TAT CTGCCTTCCCGC TTTTACGTTCCCTGC Rmet_4859 1371418 - 1370303 - | NADH:flavin oxidoreductase/NADH oxidase Rmet_4860 1373968 - 1371554 - | peptidase S45, penicillin amidase Rmet_4861 1374814 - 1374182 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Rmet_4862 1375130 - 1374840 - | antibiotic biosynthesis monooxygenase Rmet_4863 1375697 - 1375233 - | hypothetical protein TERM 912 1375499 - 1375456 - G 74 -14.6 -2.5547 | gap 1, overlap 1375455 AGCGCGTAGACGAAC GCGGA-CCCGCCGATGGCC CAGAGAC GGCCATCGCCGGGATTCGC CAGCAAGGACAGGAA Rmet_4864 1376191 - 1375754 - | hypothetical protein TERM 913 1376257 - 1376211 - R 100 -23.1 -4.05788 | overlap 1376246 GCCCTCCAAACGAAA GCTGGCGCGACGTTTCCAGTG TAGTG CTCCGGAAACGCCACGCCAGC GTGAAATTGCCGCCA Rmet_4865 1377778 - 1376297 - | RND efflux system, outer membrane lipoprotein, NodT TERM 914 1377580 - 1377614 + g 100 -20 -3.17194 | overlap 1377582 AGACCTTCCACCATT CACCGCGATGCTGGCC TTC GGCCGGCGTCGCGGTC TTCCATTGCGCGCCT TERM 915 1377582 - 1377612 + g 100 -22.6 -3.14878 | overlap 1377580 ACCTTCCACCATTCA CCGCGATGCTGGCC TTC GGCCGGCGTCGCGG TCTTCCATTGCGCGC Rmet_4866 1381035 - 1377790 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 916 1381008 - 1381034 + g 72 -13.1 -3.05384 | gap 1, opp_overlap 1380999 CGAAAACAGCCCCCC TGGCGGTCCGCT CGCA AGCGGAC-GCCA TTCGATGCCACGAAG Rmet_4867 1382321 - 1381086 - | secretion protein HlyD TERM 917 1382411 - 1382373 - R 88 -2.3 -5.46698 | gap 2, overlap 1382374 1382375 1382377 TGGAAAAGCAAAAAA TCGAGGCCGAACGCCGCCC GCC GGGCCGAGT--GGCCCGGA AATCGGGAATACGGG TERM 918 1382432 - 1382452 + r 74 -12.6 -3.21099 | opp_overlap 1382415 1382414 GGAATACGGGGGTGT TCCCGTCC GGTCA GGACGGGA TTGCTGCTGCCAGCC Rmet_4868 1383409 - 1382534 - | Alpha/beta hydrolase fold-3 Rmet_4869 1383782 - 1384708 + | LysR family transcriptional regulator TERM 919 1384690 - 1384722 + T 100 -19.9 -3.70773 | overlap 1384681 1384678 TTTCGGCGCGGCCCC GCAGGCGGTGGCGGC GTA GTTGTCACCGCCTGC TTGTTCCCTCTCCCG Rmet_4870 1386032 - 1384779 - | glutamate carboxypeptidase Rmet_4871 1386206 - 1387291 + | AraC family transcriptional regulator Rmet_4872 1388135 - 1387320 - | transport-associated Rmet_4873 1388283 - 1388996 + | hypothetical protein TERM 920 1389491 - 1389456 - g 71 -10.2 -3.65314 | opp_overlap 1389489 1389490, overlap 1389440 GGCAACTTCCAACAA GCTGCCGGCTTGGACC GTCT GGTCCCCGCTGGCTGC CTGGGCAGCGTTCGG TERM 921 1389554 - 1389574 + G 71 -10.4 -3.64716 | gap 1, overlap 1389552 TGATCGCGGTGATGG CCGCTGCCC TGGC GGGC-GCGG TATTTTCCGCGGTGC Rmet_4874 1389343 - 1390521 + | sodium/calcium exchanger membrane region Rmet_4875 1391366 - 1390590 - | 3-oxoadipate enol-lactonase Rmet_4876 1392342 - 1391356 - | hypothetical protein TERM 922 1392093 - 1392130 + g 71 -7.5 -4.07885 | CCGGCGAGCGGGCCA CCATTTCGGCGCCGATG TTTC CACCCGCGCCGGGGCGG TTTTCGACCACGATC Rmet_4877 1392651 - 1392373 - | muconolactone delta-isomerase Rmet_4878 1393829 - 1392705 - | muconate cycloisomerase TERM 923 1393127 - 1393157 + g 84 -13.9 -3.68073 | overlap 1393123 1393131 GGGCGGCCAGACGCG CCAGCGCCGTGCG TTGCT CGCGCGGCGTCGG TTGTTCGATCAGGTC TERM 924 1393131 - 1393153 + g 71 -14.1 -2.66602 | overlap 1393123 1393127 GGCCAGACGCGCCAG CGCCGTGCG TTGCT CGCGCGGCG TCGGTTGTTCGATCA TERM 925 1393194 - 1393217 + g 73 -12.4 -3.34013 | GGCCGCTTCGAGCAT GGCGATGCCG GTGG CGGCATCGGC TTCGTTCCAGGCCTG Rmet_4879 1394002 - 1394877 + | LysR family transcriptional regulator Rmet_4880 1395795 - 1394878 - | LysR family transcriptional regulator Rmet_4881 1395969 - 1396892 + | catechol 1,2-dioxygenase Rmet_4882 1397024 - 1398418 + | benzoate 1,2-dioxygenase, alpha subunit Rmet_4883 1398415 - 1398909 + | benzoate 1,2-dioxygenase, beta subunit TERM 926 1399480 - 1399493 + G 73 -9.5 -3.85698 | GCAATGTGCCACAGG GCCGC ATGA GCGGC TTTCTGGCCGGCGAG TERM 927 1399563 - 1399581 + G 70 -2.2 -4.71426 | GGCAGCTTCTACCTG CGTTCCGT CAC GCGGCCCG TTTTGTTCCTGGCCG Rmet_4884 1398951 - 1399970 + | oxidoreductase FAD-binding region benD 1399970 - 1400764 + | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase Rmet_4886 1402000 - 1400849 - | hypothetical protein TERM 928 1402045 - 1402022 - R 80 -11 -3.75153 | opp_overlap 1402020 1402022 1402023, overlap 1402023 GCTTCCCAATGCAAA CGGGCCGAAA TTGC TTCCGGCCCA TGTCTTATGCCACGG TERM 929 1402044 - 1402023 - R 70 -12.3 -2.84878 | opp_overlap 1402022 1402020 1402023, overlap 1402022 CTTCCCAATGCAAAC GGGCCGAAA TTGC TTCCGGCCC ATGTCTTATGCCACG Rmet_4887 1402685 - 1402110 - | TetR family transcriptional regulator TERM 930 1402820 - 1402791 - R 100 -23.7 -3.89354 | CCGCCAAATGAACAA GGGCCGGAAGCGA GACT TCGCTTCCGGCCC TCCCGATCAAGCCAG Rmet_4888 1404296 - 1402854 - | dihydrolipoamide dehydrogenase Rmet_4889 1405167 - 1404436 - | glutaredoxin-like region TERM 931 1406121 - 1406086 - g 72 -6.6 -4.26903 | opp_overlap 1406091, overlap 1406087 1406098 TCTACGCGATGAAAA CCGTGCGCGAAAGCGG CGTG CCGCTGGCGCGTTCGA TCCGGCTGATGATCG Rmet_4890 1405416 - 1407155 + | hypothetical protein TERM 932 1407611 - 1407623 + G 75 -10.5 -3.85817 | opp_overlap 1407609 1407606 CATGGAGAATCGAGT CCGGC GAC GCCGG TTTCTCAAGCAGGCT TERM 933 1407795 - 1407764 - g 83 -14.5 -3.28712 | gap 1 GGCGTTTCCGCAGAA GCGGCC-GCTGATC CTGCT GACCAGCCGGCCGC CGCAGTTGGAAACCC TERM 934 1407841 - 1407854 + G 74 -2.3 -4.77759 | ACGAGGGGATTCTGA CGCCT AACG ACGCG TTTTTCGTGCGTTAT Rmet_4891 1407597 - 1408829 + | sulfite dehydrogenase (cytochrome) subunit SorA apoprotein TERM 935 1409134 - 1409097 - g 81 -14.1 -3.46509 | overlap 1409100 1409128 1409130 CGTCAAGAAGATGAA GACTGCCTTCGGCGCGC CACT GCGCGACGAAGACATCC CGGTGATGGCCGACT TERM 936 1409131 - 1409100 - g 81 -16.6 -2.57252 | overlap 1409097 1409128 1409130 CAAGAAGATGAAGAC TGCCTTCGGCGCGC CACT GCGCGACGAAGACA TCCCGGTGATGGCCG Rmet_4892 1408840 - 1409496 + | sulfite dehydrogenase (cytochrome) subunit SorB Rmet_4893 1409986 - 1409507 - | hypothetical protein TERM 937 1410027 - 1410061 + r 85 -17.4 -2.87132 | opp_overlap 1410029 1410031, overlap 1410029 1410031 CAGATGGTGGTGATA CAGATCTGTCTACACA GTG TATGTAGACAGATCTG TATGTCAAGCAGGAA TERM 938 1410059 - 1410029 - R 81 -16.4 -2.87344 | opp_overlap 1410029 1410027 1410031, overlap 1410031 GATGGTGGTGATACA GATCTGTCTACACA GTG TATGTAGACAGATC TGTATGTCAAGCAGG TERM 939 1410029 - 1410059 + r 76 -14.2 -2.98823 | opp_overlap 1410029 1410031, overlap 1410027 1410031 GATGGTGGTGATACA GATCTGTCTACACA GTG TATGTAGACAGATC TGTATGTCAAGCAGG TERM 940 1410057 - 1410031 - R 76 -13.2 -2.98823 | opp_overlap 1410029 1410027 1410031, overlap 1410029 TGGTGGTGATACAGA TCTGTCTACACA GTG TATGTAGACAGA TCTGTATGTCAAGCA Rmet_4894 1411876 - 1410110 - | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rmet_4895 1412204 - 1413736 + | acetyl-CoA hydrolase/transferase TERM 941 1413799 - 1413776 - T 74 -12.4 -3.14564 | overlap 1413778 TCAGTCTTCCATCAA CACCCGGAGC ATCC GCTCCGGGTC GACCAGAAAGTCACG TERM 942 1413797 - 1413778 - T 82 -15 -3.13522 | overlap 1413776 AGTCTTCCATCAACA CCCGGAGC ATCC GCTCCGGG TCGACCAGAAAGTCA Rmet_4896 1414555 - 1413761 - | SMC protein-like protein Rmet_4897 1414715 - 1414822 + | hypothetical protein Rmet_4898 1414932 - 1415873 + | patatin TERM 943 1416072 - 1416050 - g 79 -6.3 -4.62471 | gap 1 TCGAACTGGGAAAAA CGACGTGCAC GCGT ATGC-CGTCG GGCCCTGATCGCACC Rmet_4899 1415947 - 1416483 + | hypothetical protein Rmet_4900 1416612 - 1416929 + | XRE family transcriptional regulator Rmet_4901 1416926 - 1418227 + | HipA-like protein Rmet_4902 1419043 - 1418279 - | short-chain dehydrogenase/reductase SDR Rmet_4903 1419189 - 1419791 + | TetR family transcriptional regulator TERM 944 1420105 - 1420154 + G 80 -12.3 -3.76534 | gap 2, opp_overlap 1420094, overlap 1420075 CGTAGTCTGCGTGGC GCTGGCGTTGATCGCCGGGGCCA TGGCAC TGGCCACGGT-ATCGACGC-AGC TTTGGCATTTGTTCA TERM 945 1420488 - 1420522 + G 74 -12.9 -3.27923 | CGGCGCCCGCCACCA CGGCACCG-GCCATGCC GCT GACATGGCGCGG-GCCG TTCGTGGTGTTGCGC Rmet_4904 1419833 - 1421140 + | major facilitator transporter TERM 946 1421202 - 1421169 - T 74 -12.5 -3.14878 | gap 1, overlap 1421167 1421172 1421196 CGCCGGAAGGCAACA CTA-GCGTTCGTGGCA GGC CGCCACGAACGCGTCG ATGAGCGCCGCCGCG TERM 947 1421198 - 1421172 - T 88 -18.8 -2.77791 | overlap 1421169 1421167 1421196 CGGAAGGCAACACTA GCGTTCGTGGCA GGC CGCCACGAACGC GTCGATGAGCGCCGC Rmet_4905 1422074 - 1421169 - | LysR family transcriptional regulator Rmet_4906 1422156 - 1422578 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_4907 1422621 - 1423316 + | fumarylacetoacetate (FAA) hydrolase TERM 948 1423342 - 1423372 + F 100 -17.7 -5.24003 | overlap 1423331 TCGCGTAGTGCCAGA CGGCGTTGCTCAT TTCTC GTGAGCAACGCCG TTTTTCCTTTTTATT Rmet_4908 1423714 - 1424211 + | hypothetical protein TERM 949 1424256 - 1424221 - f 73 -13.2 -2.75975 | overlap 1424206 1424205 1424218 1424241 GCCTAATACAGATCA GGCCACCGACGCGATA CACA TGCCGGGCCGGTGGCC GACACCAACATCTGG Rmet_4909 1424436 - 1425041 + | TetR family transcriptional regulator TERM 950 1425076 - 1425110 + T 100 -14.3 -4.50661 | GGCGCATCACGCGCC CGACGCCCGCCGT CTTGCTCTC GCGGCGGGCGTTG TTTTCGTTCTCGCTT Rmet_4910 1425918 - 1425067 - | exodeoxyribonuclease III Rmet_4911 1426587 - 1426042 - | hypothetical protein TERM 951 1426546 - 1426525 - G 70 -5.9 -4.24342 | gap 1, opp_overlap 1426537 GGCCGGAGCAACAAA GCAGATATCC GTG GG-TACCTGC GAACTGGCGCGAACC Rmet_4912 1427168 - 1426638 - | NosL Rmet_4913 1427986 - 1427165 - | ABC-type transport system protein Rmet_4914 1428936 - 1427986 - | ABC transporter related TERM 952 1428230 - 1428193 - G 78 -14.2 -3.2964 | gap 2, overlap 1428181 AAAGTGCTGCCACAA CGC-GGCA-CGCGCGCCG CGCT CGACGCGCAATGCCAGCG TCACCGGCAGATCAA Rmet_4915 1430191 - 1428914 - | periplasmic copper-binding Rmet_4916 1432806 - 1430188 - | FMN-binding TERM 953 1432631 - 1432621 - G 72 -8.2 -4.07568 | overlap 1432622 CTTGCGCTCGGAAAA GCGC GCG GCGC CGGGAAACACGTCGG TERM 954 1432783 - 1432765 - G 100 -10.2 -5.32882 | overlap 1432766 CAGCAGCAGAAAAAA TGCGGCCA ACT TGGCCGCG AACTCCTGATTACCG TERM 955 1432782 - 1432766 - G 86 -13.7 -3.78644 | overlap 1432765 AGCAGCAGAAAAAAT GCGGCCA ACT TGGCCGC GAACTCCTGATTACC Rmet_4917 1434802 - 1432862 - | nitrous-oxide reductase TERM 956 1434619 - 1434675 + g 74 -13.3 -3.24245 | CCGCGATTTCGTGTC CGGATGCAGCCGGCGCCGCAGCACCCG AAG CCGGTGCAGCGGCTCCCGCGGCTGGCG TTCCCTTATCCGTGC TERM 957 1435198 - 1435145 - g 75 -8 -4.26881 | gap 3, overlap 1435140 GCGGACAAAAGGAAA GCGCCGC-ACCTGCGCC-G-GCCGAGG CCA CCGCGGCACCAGCACCGGCCGCTGCGC CCGCGGCTACTGCGG Rmet_4918 1435075 - 1435488 + | cytochrome c, class I Rmet_4919 1435493 - 1436515 + | ApbE-like lipoprotein TERM 958 1437635 - 1437607 - g 88 -8.2 -4.63218 | gap 1 GGTCTGGGAAGAAAA GGACGAGCA-GAT TGCC ACCATGCTCGCCC AGGCCGCTCGGCCCT Rmet_4920 1436750 - 1437652 + | phospholipid/glycerol acyltransferase Rmet_4921 1438130 - 1437726 - | putative lipoprotein TERM 959 1438175 - 1438154 - R 100 -13 -4.70353 | CAGAACAAAGGAAAA CAGGCGCC GGGTCG GGCGCCTG ACATGGGGAGTGGGA Rmet_4922 1438496 - 1438209 - | hypothetical protein TERM 960 1438662 - 1438648 - H 81 -4.2 -4.91459 | overlap 1438651 GAACAGCCACAAAAA CGATGC CGC ACACCG ACGCCCCTGTGCTGG Rmet_4923 1438772 - 1439098 + | thioredoxin-related Rmet_4924 1439624 - 1439151 - | AsnC family transcriptional regulator Rmet_4925 1439828 - 1440901 + | 4-hydroxyphenylpyruvate dioxygenase TERM 961 1440982 - 1441009 + F 100 -14.9 -4.15222 | gap 1 GGCGGCGCGCACCCT GCGC-CCGGCGT CACCC ACGCCGGCGCGC TTTATTGACAAGCGT TERM 962 1442439 - 1442427 - g 95 -10.5 -4.82901 | CCTCCGGCAGAAAAA GGCCG GTT CGGCC ATGCCCGCCGCCAGC Rmet_4926 1441081 - 1442469 + | amino acid permease-associated region TERM 963 1442831 - 1442861 + G 74 -10.2 -3.72893 | overlap 1442832 CGCTGCAGACGCTGG GCGGCTCGGGCGCG CTG CGCGTCGGCGCCGA TTTCCTGAAGCGCTA TERM 964 1442832 - 1442860 + G 73 -13.7 -2.83522 | overlap 1442831 GCTGCAGACGCTGGG CGGCTCGGGCGCG CTG CGCGTCGGCGCCG ATTTCCTGAAGCGCT Rmet_4927 1442527 - 1443723 + | aromatic amino acid aminotransferase TERM 965 1443751 - 1443774 + F 100 -16.8 -4.19746 | opp_overlap 1443754, overlap 1443754 ACGCCTTTGCAGTCA CAAGGCCACC CTCG GGTGGCCTTG TTCTTTTCCCGTCCG TERM 966 1443771 - 1443754 - f 76 -12.7 -3.35679 | opp_overlap 1443754 1443751 CCTTTGCAGTCACAA GGCCACC CTCG GGTGGCC TTGTTCTTTTCCCGT TERM 967 1443754 - 1443771 + F 95 -12.7 -4.21471 | opp_overlap 1443754, overlap 1443751 CCTTTGCAGTCACAA GGCCACC CTCG GGTGGCC TTGTTCTTTTCCCGT TERM 968 1444458 - 1444491 + G 72 -11 -3.50853 | GTTCGTCGGCGGCCT GCCCGCCATGATCG GGGTGG CGATGATCGCGGGC TTCTCGTTCCAGGGC TERM 969 1445187 - 1445205 + G 80 -16 -2.89742 | opp_overlap 1445180 1445178 AGGCAAGATCGACTG GGTGGCCG TGA CGGCCACC TATGTGGGCATTCCG TERM 970 1445370 - 1445319 - g 72 -6.4 -4.2349 | gap 1, overlap 1445322 1445367 GCCTGAGATCGAAAA GGACGATTCACCCG-TGACGCGGCC TCT GGCCCCGGCATCGGCCGAATAGCAC GGCATACCGAAGCGC Rmet_4928 1443835 - 1445367 + | amino acid permease-associated region TERM 971 1445415 - 1445367 - f 80 -14.6 -3.02511 | gap 1, opp_overlap 1445399, overlap 1445319 1445370 1445382 GGCATCGGCCGAATA GCACGGCATACCGAAGCGCCCGA GTGA CCGGGCGCTTCGGCA-ACCTTCC GCCGAAGCGTTTACC TERM 972 1445412 - 1445370 - f 77 -14.9 -2.73994 | gap 1, opp_overlap 1445399, overlap 1445367 1445382 ATCGGCCGAATAGCA CGGCATACCGAAGCGCCCGA GTGA CCGGGCGCTTCGGCA-ACCT TCCGCCGAAGCGTTT TERM 973 1445401 - 1445382 - f 74 -12.8 -3.12999 | opp_overlap 1445399, overlap 1445370 1445367 GCACGGCATACCGAA GCGCCCGA GTGA CCGGGCGC TTCGGCAACCTTCCG TERM 974 1445399 - 1445424 + F 77 -11.9 -3.62572 | opp_overlap 1445382 1445370 1445367 GCCCGAGTGACCGGG CGCTTCGGC AACCTTCC GCCGAAGCG TTTACCATCCTCGTC Rmet_4929 1445465 - 1446172 + | glutathione S-transferase-like protein Rmet_4930 1447026 - 1446211 - | IclR family transcriptional regulator TERM 975 1446727 - 1446774 + g 89 -18.4 -3.05596 | gap 1 GGCGGCTTCCGACAG CCGCAGCGGATCGGCCT-GCCGC ATC GCGGCCAGCCCGATCTGCAGCGC TTCGATCCCGAGGTG Rmet_4931 1447146 - 1448138 + | hypothetical protein TERM 976 1448818 - 1448838 + G 70 -11.1 -3.30124 | GAGGAGCAGGTGGCC GTGGCCCAC GCT GTGGGCAAC TTCTGGCAACTGGCC Rmet_4932 1448170 - 1450512 + | ferredoxin TERM 977 1450602 - 1450564 - T 77 -11.9 -3.65581 | gap 2, overlap 1450565 ATCAACCGGCAACAA CGCCACTCAGCACGGCATC ACG GATGCCGTGC-GAGTA-CA CCCCGAATCGTATCG TERM 978 1450601 - 1450565 - T 73 -13.2 -2.78867 | gap 2, overlap 1450564 TCAACCGGCAACAAC GCCACTCAGCACGGCATC ACG GATGCCGTGC-GAGTA-C ACCCCGAATCGTATC Rmet_4933 1451543 - 1450581 - | response regulator receiver (CheY-like) modulated CheW protein TERM 979 1452161 - 1452195 + G 72 -6.5 -4.3129 | gap 1 CCGCGAGGTCGTCGC CGGCAT-CACCACC TTCATGGC GATGGTGTATGCCG TTTTCGTCGTGCCTG Rmet_4934 1452036 - 1453418 + | xanthine/uracil/vitamin C permease TERM 980 1453477 - 1453503 + F 100 -16.6 -5.5353 | CCGGTGGATTTGCCA GCCTCCGGGG ACTTTCC CCCCGGAGGC TTTTTTCTTCCTCTC Rmet_4935 1453980 - 1454294 + | H-NS family DNA-binding protein Rmet_4936 1455107 - 1454349 - | hypothetical protein Rmet_4937 1455389 - 1456381 + | AsnC family transcriptional regulator TERM 981 1456379 - 1456411 + T 72 -2.6 -4.74103 | gap 1, opp_overlap 1456367, overlap 1456391 1456392 ATACCGGCGAGGGTC TAA-GCCCTCGCCCG CCCG CTTGCGCGGGCCTTA TTTTTCCATTCAGGA TERM 982 1456391 - 1456408 + T 79 -8.3 -4.47888 | opp_overlap 1456367, overlap 1456379 1456392 GTCTAAGCCCTCGCC CGCCCGC TTGC GCGGGCC TTATTTTTCCATTCA TERM 983 1456392 - 1456407 + T 72 -11.8 -3.27648 | overlap 1456391 1456379 TCTAAGCCCTCGCCC GCCCGC TTGC GCGGGC CTTATTTTTCCATTC Rmet_4938 1456888 - 1456433 - | hypothetical protein TERM 984 1456607 - 1456583 - G 74 -5 -4.56597 | GCGGCGCTGGAAAAA CAGCG-TGTCCG TGT CGG-CATCGCCG CTAATCAGGCGCAGG Rmet_4939 1457805 - 1456885 - | peptidase U32 TERM 985 1457344 - 1457313 - G 71 -12.2 -3.25823 | gap 1, opp_overlap 1457320 GCGCTTCCAGATCAA GACC-CGCCGGTCGC GCC GCGGCCAGCGCGGCC ATCGTGCGGCCATCC Rmet_4940 1458867 - 1457839 - | peptidase U32 Rmet_4941 1459890 - 1458985 - | IclR family transcriptional regulator Rmet_4942 1459974 - 1461422 + | succinate semialdehyde dehydrogenase Rmet_4943 1461495 - 1462652 + | iron-containing alcohol dehydrogenase Rmet_4944 1462949 - 1463230 + | hypothetical protein Rmet_4945 1463676 - 1463212 - | PRC-barrel TERM 986 1463895 - 1463882 - R 72 -2.3 -4.83615 | overlap 1463883 TAGCGCTGATAAAAA TGTCG GCCC CGGCA TCGGCGACCGCCCGC Rmet_4946 1464688 - 1463930 - | citrate synthase TERM 987 1464465 - 1464421 - G 74 -11.2 -3.61398 | TGCCCGCGCCAAGAA TGCCCGCCGCGACGGCGCCC TGCAG GGACTCCGGCGCACCGTGCA GCGTGAGCCGGGTGG Rmet_4947 1465685 - 1464702 - | hypothetical protein TERM 988 1464906 - 1464872 - G 80 -12.1 -3.73224 | gap 1, opp_overlap 1464874 CCAGTTCGGACGAAA GCCGCGCGACGACGTC ATCG GGCGTCTTCGC-CGGC ACGAAGATGCCGGAC Rmet_4948 1466509 - 1465697 - | short-chain dehydrogenase/reductase SDR Rmet_4949 1468090 - 1466525 - | acyl-CoA synthetase Rmet_4950 1468229 - 1469254 + | LacI family transcription regulator Rmet_4951 1470271 - 1469282 - | hypothetical protein TERM 989 1470043 - 1469990 - G 85 -16.7 -3.14132 | gap 1, opp_overlap 1470000 1470042, overlap 1470000 CGTCCCTTGCAGCAA GGTGTAACCATCGGGCGCAGCGCTGG CCA CCAGCGCTGCGCC-GATATTGCCGCC GGCGCCGGCACGGTT TERM 990 1470000 - 1470033 + g 100 -23.3 -3.01712 | gap 1, opp_overlap 1469990 1470000 AGCAAGGTGTAACCA TCGGGCGCAGCGCTGG CCA CCAGCGCTGCGCC-GA TATTGCCGCCGGCGC TERM 991 1470033 - 1470000 - G 100 -23.3 -2.73721 | gap 1, opp_overlap 1470000, overlap 1469990 AGCAAGGTGTAACCA TCGGGCGCAGCGCTGG CCA CCAGCGCTGCGCC-GA TATTGCCGCCGGCGC Rmet_4952 1471108 - 1470299 - | short-chain dehydrogenase/reductase SDR TERM 992 1470483 - 1470440 - G 72 -11.7 -3.53012 | gap 3 GCCTTGCCGGCCAAA CGGCAGCGGC-GCGCTGGTGCG GTC CGG-CC-GCGCAGCCGATGCCG CCCGCCCCATTGGGG Rmet_4953 1472153 - 1471131 - | hypothetical protein Rmet_4954 1473953 - 1472553 - | GntR family transcriptional regulator Rmet_4955 1474133 - 1475566 + | cytochrome bd ubiquinol oxidase, subunit I Rmet_4956 1475571 - 1476578 + | cytochrome d ubiquinol oxidase, subunit II Rmet_4957 1476858 - 1477556 + | hypothetical protein Rmet_4958 1478885 - 1477794 - | fimbrial protein Rmet_4959 1481675 - 1479072 - | fimbrial biogenesis outer membrane usher protein Rmet_4960 1482494 - 1481790 - | pili assembly chaperone Rmet_4961 1483177 - 1482623 - | fimbrial protein TERM 993 1483006 - 1483049 + g 84 -14.6 -3.36749 | gap 1, opp_overlap 1483006 GCGTGGTCGTCGAAA CGGTCGGCATCGTGACCGTGA AGT TCACCGGCGCGGTGCC-ACCG TTGATCTTGCAGGTC Rmet_4962 1484375 - 1483479 - | diguanylate phosphodiesterase Rmet_4963 1487956 - 1484588 - | histidine kinase Rmet_4964 1488881 - 1488210 - | two component LuxR family transcriptional regulator TERM 994 1489105 - 1489088 - R 79 -12.7 -3.56226 | overlap 1489086 AAGTAGCGAGAAAGA GCGGGTC CGAG GACCCGC GTGCCGGCTGCGATT Rmet_4965 1489803 - 1489159 - | two component LuxR family transcriptional regulator TERM 995 1489418 - 1489402 - G 76 -13.7 -3.14931 | GGCATCGCCGAGCAA CGCCTGC ACC GCAGGCG CCAGATAAGCGATAC Rmet_4966 1492833 - 1489978 - | histidine kinase TERM 996 1491074 - 1491064 - G 88 -8.2 -4.68645 | CACGGAAAAGGAAAA GCGG CTG CCGC GCCCAAGCTCGCTCT TERM 997 1491124 - 1491100 - G 70 -13.6 -2.64099 | gap 1, overlap 1491099 GCTCTCGACGACAAT GCTGGCCC-CC ATCC GGCGGGCCAGC CTCCTGCAGATCGAA Rmet_4967 1493114 - 1493377 + | hypothetical protein TERM 998 1493441 - 1493458 + T 78 -14.1 -3.14463 | overlap 1493453 GCCCCAACGCGCGCG GGCGCCG TCAG CGGCGCC TTACTCGAAAGGCTT Rmet_4968 1494487 - 1493459 - | di-haem cytochrome c peroxidase Rmet_4969 1495835 - 1494741 - | hypothetical protein Rmet_4970 1498303 - 1495832 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_4971 1501844 - 1498386 - | carbamoyl-phosphate synthase L chain, ATP-binding Rmet_4972 1501854 - 1503542 + | integrase catalytic subunit Rmet_4973 1503545 - 1504453 + | TniB Rmet_4974 1504450 - 1505667 + | TniQ Rmet_4975 1505728 - 1506342 + | resolvase-like protein Rmet_4976 1506840 - 1506409 - | hypothetical protein Rmet_4977 1508200 - 1506869 - | periplasmic sensor signal transduction histidine kinase Rmet_4978 1508862 - 1508197 - | two component transcriptional regulator Rmet_4979 1509643 - 1508885 - | hypothetical protein Rmet_4980 1510102 - 1509653 - | putative signal peptide protein Rmet_4981 1510914 - 1510132 - | hypothetical protein Rmet_4982 1511581 - 1510985 - | undecaprenyl-diphosphatase TERM 999 1511591 - 1511625 + r 72 -14.2 -2.62616 | opp_overlap 1511618 TTCCATGAGGTCTCC GGGCCGGATCGCCTCC GAG GGAAACGATCCGGCCA TACTGTCGGGAGTCA Rmet_4983 1511973 - 1511638 - | peptidase Rmet_4984 1512097 - 1512864 + | hypothetical protein Rmet_4985 1514178 - 1512871 - | sodium/hydrogen exchanger TERM 1000 1514346 - 1514370 + H 72 -12.7 -3.01712 | opp_overlap 1514345 1514346 CGGAGTCGTGTAAAG CCCCGCGCTGC AAG GCTGGGCGGGG TATTGCCGCCCACCG Rmet_4986 1514538 - 1515251 + | two component LuxR family transcriptional regulator Rmet_4987 1515260 - 1517245 + | periplasmic sensor signal transduction histidine kinase Rmet_4988 1517421 - 1518233 + | NLPA lipoprotein TERM 1001 1518244 - 1518267 + F 83 -16 -3.03243 | GTTGATGTGGCACGT GTCGGGCTGG TCAG CCAGCCCGGC TCTTCAGGGATGCCT Rmet_4989 1518762 - 1521308 + | endonuclease/exonuclease/phosphatase Rmet_4990 1521296 - 1521958 + | rhomboid-like protein Rmet_4991 1523098 - 1521917 - | porin TERM 1002 1522594 - 1522566 - G 78 -3 -4.88407 | gap 1, overlap 1522567 GTACCGAACGAAAAA TGCCCCAGCGCCG TGAT CGGC-CCGAAGCT GCCGGTGTACTTGAT Rmet_4992 1524800 - 1523286 - | major facilitator transporter TERM 1003 1524465 - 1524428 - GH 76 -13.3 -3.02511 | gap 1 GCGATGCGGCGAACA GCCCGCCCGCGCCGAAGC CCT GCACCG-CGCGGGCCAGC GCAAGCTCGAGCGGA TERM 1004 1525788 - 1525740 - gH 70 -2.4 -4.64861 | gap 2, opp_overlap 1525772 1525776 1525779, overlap 1525741 GGTGGCGAAAACAAA CGGC-CGA-AACGTCGAAATCCCG GCC CTGCAATCCGACATCGTCGCGCCG AAATCGGTCTTGACG Rmet_4993 1524799 - 1526379 + | major facilitator transporter Rmet_4994 1526702 - 1527847 + | porin TERM 1005 1527875 - 1527902 + G 100 -9 -5.41143 | overlap 1527878 TCCTTGTCTCAGCCC TTGCGGTGGCCG ACGG CGGCCACCGTTC TTTTTTTGGGGGCTC TERM 1006 1527878 - 1527899 + G 100 -17.3 -4.79949 | overlap 1527875 TTGTCTCAGCCCTTG CGGTGGCCG ACGG CGGCCACCG TTCTTTTTTTGGGGG Rmet_4995 1527863 - 1528507 + | hypothetical protein Rmet_4996 1529310 - 1528756 - | hypothetical protein Rmet_4997 1529849 - 1529538 - | hypothetical protein Rmet_4998 1531376 - 1530030 - | citrate carrier protein TERM 1007 1530744 - 1530734 - G 70 -2.4 -4.63218 | CCGTCGCGAACAAAA GGCC CTG GTCC TGGTGAAGGATCTCG TERM 1008 1531693 - 1531683 - R 75 -2.4 -4.946 | overlap 1531684 ATCAAACACGAAAAA GCGG GCG CTGC CGGGGGAGGATAGGG Rmet_4999 1533424 - 1531904 - | hypothetical protein Rmet_5000 1535006 - 1533468 - | hypothetical protein TERM 1009 1534011 - 1533984 - G 75 -4 -4.62069 | gap 1, opp_overlap 1533999, overlap 1533986 GCGCCATTCGAAAAA CG-GCCCGATCGC GTC ACGCTCGGTCTCG ACCGCAGCCGATACC Rmet_5001 1535442 - 1535347 - | hypothetical protein Rmet_5002 1536869 - 1535544 - | major facilitator transporter TERM 1010 1536533 - 1536483 - G 70 -8.1 -4.05747 | CAGATCGGAGACAAA GGTCTGCCGCGCGGGGGCGTC GAACGCGGT GACGCACCCGAGCAGCAATGC GAACACGTAGACATG Rmet_5003 1537355 - 1536903 - | MarR family transcriptional regulator TERM 1011 1536995 - 1537022 + g 86 -13.4 -3.89215 | gap 1 GGATGGCGCGGTAGA GCCAGTCCTCGCG CGC CGCGCGG-CTGGC TTTGACTTTCTGGCG TERM 1012 1537368 - 1537395 + H 70 -12.8 -2.87344 | opp_overlap 1537372, overlap 1537372 CATGGCATGCGACTA GGAAGGTTACCT TGCA AGGTTACCTTCC TATCTGGGGCAGGTC Rmet_5004 1537595 - 1537876 + | antibiotic biosynthesis monooxygenase Rmet_5005 1538773 - 1538204 - | isochorismatase hydrolase Rmet_5006 1539213 - 1538776 - | hypothetical protein Rmet_5007 1539295 - 1539870 + | hypothetical protein Rmet_5008 1539965 - 1540168 + | CsbD-like protein TERM 1013 1540189 - 1540213 + T 74 -11.4 -3.54424 | opp_overlap 1540191, overlap 1540191 CGCTTGCAAGAAAGA AAGGCGTGCC ACCCG GGCACGCCTG TTTCCGGGAGTCACC TERM 1014 1540191 - 1540211 + T 81 -14 -3.35046 | opp_overlap 1540191, overlap 1540189 CTTGCAAGAAAGAAA GGCGTGCC ACCCG GGCACGCC TGTTTCCGGGAGTCA TERM 1015 1540211 - 1540191 - T 100 -14 -4.67607 | opp_overlap 1540189 1540191 CTTGCAAGAAAGAAA GGCGTGCC ACCCG GGCACGCC TGTTTCCGGGAGTCA Rmet_5009 1541692 - 1540427 - | HI0933-like protein Rmet_5010 1541767 - 1542399 + | hypothetical protein Rmet_5011 1543804 - 1542425 - | mercuric reductase Rmet_5012 1544106 - 1544573 + | cupin 2, barrel TERM 1016 1544644 - 1544672 + F 70 -12.4 -2.88544 | gap 1, overlap 1544646 CCTGACATCGCAACC TG-CCGGCGCCGC ATGT GCGGCGCCGCTCA TATCTGGCCCTCCAG TERM 1017 1544646 - 1544669 + F 77 -15.2 -2.69468 | overlap 1544644 TGACATCGCAACCTG CCGGCGCCGC ATGT GCGGCGCCGC TCATATCTGGCCCTC Rmet_5013 1544735 - 1546309 + | FAD dependent oxidoreductase TERM 1018 1546953 - 1546919 - g 76 -14.2 -3.08679 | GCGTGTCATGGAAGA CGCCGTACGCGACG GCAAGAT CGGCGCGTTCGGCG CTGGCTCCCATCGCG Rmet_5014 1546368 - 1547375 + | aldo/keto reductase TERM 1019 1547581 - 1547608 + F 73 -9.9 -3.65812 | overlap 1547584 CCCCCTCCATTCCCC CACCCACCCAA CCCCAT TTGGGTGGCTG TTCTCTTGAACGCAA TERM 1020 1547747 - 1547726 - g 100 -10.1 -5.10154 | gap 1, overlap 1547727 1547728 ACCCAAAATGAAAAA CTCGCCGGCG ATA CGCCAGCG-G TGGCGGCCTTCGACT TERM 1021 1547747 - 1547727 - g 71 -10.3 -3.64465 | overlap 1547726 1547728 CCCAAAATGAAAAAC TCGCCGGCG ATA CGCCAGCGG TGGCGGCCTTCGACT TERM 1022 1547746 - 1547728 - g 71 -13.8 -2.77595 | overlap 1547726 1547727 CCAAAATGAAAAACT CGCCGGCG ATA CGCCAGCG GTGGCGGCCTTCGAC Rmet_5015 1547708 - 1549381 + | glucose-methanol-choline oxidoreductase Rmet_5016 1549414 - 1551180 + | hypothetical protein Rmet_5017 1551212 - 1552633 + | aldehyde dehydrogenase TERM 1023 1552704 - 1552671 - T 100 -11.7 -4.81852 | gap 1, opp_overlap 1552677, overlap 1552673 CGATAAGGAAGAAAA CG-GGAAGGGAGCGGC GGC GCCGCTCCCTTTGTCG TTTCTGGGTCATCGA TERM 1024 1552677 - 1552697 + T 100 -18.3 -4.17701 | opp_overlap 1552673 1552671 GGAAGAAAACGGGAA GGGAGCGGC GGC GCCGCTCCC TTTGTCGTTTCTGGG Rmet_5018 1553351 - 1552713 - | hypothetical protein TERM 1025 1554309 - 1554275 - g 81 -9.2 -4.21275 | gap 1 TGAACTGATCGAAAA GCTTGGCCTGGCCGG CGAGAC CCTGCCCGGCC-AGC ACGACCGCGCCGGCT TERM 1026 1554676 - 1554627 - g 74 -11.2 -3.60792 | GCCGCAATTGCCAAA CTGCGCGCGCAGGGCCTCGGCT TTGTCG AGGCGCAGCCATGAGCGCGCCG ATGCTGGTCCTGCTG Rmet_5019 1553502 - 1554668 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5020 1554665 - 1555096 + | thioesterase superfamily protein Rmet_5021 1557715 - 1555148 - | ATP-dependent transcription regulator LuxR TERM 1027 1557852 - 1557867 + H 87 -10.4 -4.30576 | opp_overlap 1557852 TGGGAACCGCGCAAA GCGCAC GGTC GTGCGC TTTTGCTCCTCCCGC TERM 1028 1557867 - 1557852 - H 73 -10.4 -3.57561 | opp_overlap 1557852 TGGGAACCGCGCAAA GCGCAC GGTC GTGCGC TTTTGCTCCTCCCGC TERM 1029 1558921 - 1558941 + G 72 -9 -4.04206 | gap 1, overlap 1558905 TGCACGCGGCCGCCT GCGA-GCGC TTCT GCGCATCGC TTTGTGTCGCCCTGA TERM 1030 1559116 - 1559092 - g 81 -13.6 -3.53012 | CGCTCCTGCGCGAAA CACTGGCGGA GCGGT TCCGCCAGCG CAGCGAATCGGTGCG TERM 1031 1559672 - 1559648 - g 76 -9.9 -4.11692 | CATCCAGTCGGAAAA CGCGCCATTGA TCG TCGAGGGCGCG CCGCTGCTCGGCAGC TERM 1032 1560750 - 1560792 + G 81 -13.6 -3.53091 | gap 3, opp_overlap 1560771, overlap 1560750 ATCTTCCGCAAGCTT GG-CGTG-ACATCGCGCGACG AAGC CGTCGCGCG-TGTGCGCGACC TTTCCCGCCCGAGCT TERM 1033 1560750 - 1560791 + G 71 -13.8 -2.71712 | opp_overlap 1560771, overlap 1560750 ATCTTCCGCAAGCTT GGCGTG-ACATCGCGCGACG AAGC CGTCGCGCG-TGTGCGCGAC CTTTCCCGCCCGAGC Rmet_5022 1557966 - 1560809 + | ATP-dependent transcription regulator LuxR TERM 1034 1560968 - 1560940 - f 86 -12.3 -3.89346 | overlap 1560892 TCGGCAGGCGACAAA CGCCCTGCGGCAC CAT GTGCCGCTGACCG AGGAGACGCGTTCCA Rmet_5023 1560983 - 1562878 + | feruloyl-CoA synthase Rmet_5024 1562916 - 1564055 + | acyl-CoA dehydrogenase-like protein Rmet_5025 1564108 - 1565295 + | lipid-transfer protein Rmet_5026 1565307 - 1565747 + | hypothetical protein Rmet_5027 1565761 - 1566177 + | MaoC-like dehydratase Rmet_5028 1566220 - 1567044 + | short-chain dehydrogenase/reductase SDR TERM 1035 1567151 - 1567124 - T 100 -21.3 -4.90266 | opp_overlap 1567124 GGCACCAATGAAAAA GCCCCGGCCGC TCATCT GCGGCCGGGGC TTTTTCTCGTGAGAG TERM 1036 1567124 - 1567151 + T 100 -21.3 -4.91109 | opp_overlap 1567124 GGCACCAATGAAAAA GCCCCGGCCGC TCATCT GCGGCCGGGGC TTTTTCTCGTGAGAG Rmet_5029 1568510 - 1567176 - | lipolytic enzyme, G-D-S-L Rmet_5030 1568927 - 1569328 + | hypothetical protein Rmet_5031 1569401 - 1570702 + | putative outer membrane cation efflux protein Rmet_5032 1570699 - 1572216 + | secretion protein HlyD Rmet_5033 1572213 - 1575380 + | heavy metal efflux pump CzcA Rmet_5034 1575377 - 1575748 + | putative signal peptide protein TERM 1037 1575830 - 1575801 - T 100 -10.7 -5.40474 | gap 1, overlap 1575802 ATCCCGGCAAAAAAA GTCG-CCGCGACCA TCG CGGTCGCGGCCGAA AAGGGGGCATGTTCG TERM 1038 1575829 - 1575802 - T 91 -14.2 -3.83561 | gap 1, overlap 1575801 TCCCGGCAAAAAAAG TCG-CCGCGACCA TCG CGGTCGCGGCCGA AAAGGGGGCATGTTC Rmet_5035 1576088 - 1575870 - | hypothetical protein Rmet_5036 1576349 - 1576116 - | hypothetical protein Rmet_5037 1577003 - 1576563 - | phenylacetic acid degradation-related protein Rmet_5038 1578151 - 1577105 - | hypothetical protein Rmet_5039 1580029 - 1578194 - | acetolactate synthase, large subunit TERM 1039 1579835 - 1579825 - G 80 -5.4 -4.79756 | overlap 1579826 CACACAAGCCAAAAA TGTG CTT CACA CCGTTGAGCTGGAGC Rmet_5040 1580047 - 1580778 + | GntR family transcriptional regulator Rmet_5041 1582059 - 1580857 - | diguanylate cyclase TERM 1040 1580912 - 1580940 + g 74 -10.3 -3.78329 | gap 1, opp_overlap 1580911 ATATCCGCCCAAAGC CGGGTCCGGATG CTGTTC CGTCCGG-CCCG TTTGGCTTCATAGAG Rmet_5042 1582438 - 1582181 - | hypothetical protein TERM 1041 1583125 - 1583114 - g 76 -2.2 -4.8622 | overlap 1583124 TCGCGGAAGCAAAAA GCCT GATG AAGC CGGCGGGCAAGTAGC Rmet_5043 1582483 - 1583139 + | phasin TERM 1042 1583191 - 1583139 - T 79 -15.5 -2.70932 | opp_overlap 1583162, overlap 1583124 1583125 GCCGGCGGGCAAGTA GCCCCCTGGCC-GCGAAGCCCGGCC TGACC GGTCGGGC-CCGCCGGCCCGGAAGC GTCAATGTCTGATCG Rmet_5044 1584326 - 1583253 - | MscS mechanosensitive ion channel Rmet_5045 1585477 - 1584488 - | formimidoylglutamase Rmet_5046 1586891 - 1585467 - | amino acid permease-associated region Rmet_5047 1588491 - 1586935 - | histidine ammonia-lyase TERM 1043 1587803 - 1587764 - G 81 -16.4 -2.54896 | gap 1, overlap 1587760 CGCGGATCGAACGGA GCGCGCGAGCCGAGCGTCG CCT CGACGGTCAGCGCGC-CGC AAACGCTGGCCGCCG Rmet_5048 1590186 - 1588507 - | urocanate hydratase TERM 1044 1588572 - 1588615 + g 77 -12.5 -3.61398 | overlap 1588576 AATCGATGGCGATCT CGTAGCCGGC-ATCGGCGTGG CGCA TCACGCCGGTCGCCGGAT-CG TTGTTCAGCACGCGG TERM 1045 1588576 - 1588612 + g 71 -13 -2.93073 | gap 1, overlap 1588572 GATGGCGATCTCGTA GCCGGC-ATCGGCGTGG CGCA TCACGCCGGTCGCCGGA TCGTTGTTCAGCACG Rmet_5049 1591160 - 1590405 - | histidine utilization repressor TERM 1046 1590998 - 1591017 + g 71 -7.9 -4.07568 | TCATCCGGCTGGCAC CGAACTG CTCCAC CAGTTCG TTTTCGGACGGCACA TERM 1047 1591218 - 1591194 - R 84 -11.4 -4.05446 | CCGGGCAAGGATAAA GCGCGAAGCG TTGAC CGATTCGCGC ACCTATACATGATTA TERM 1048 1591317 - 1591296 - R 70 -10.1 -3.53012 | overlap 1591297 1591310 CTCGCGTGGGGTAAA GCCGGGCAT GGAA ATGCCCGGA CTGCCGACGCAAGAA TERM 1049 1591316 - 1591297 - R 73 -13.6 -2.71712 | overlap 1591296 1591310 TCGCGTGGGGTAAAG CCGGGCAT GGAA ATGCCCGG ACTGCCGACGCAAGA TERM 1050 1591361 - 1591334 - R 100 -20.6 -4.20516 | opp_overlap 1591334 TGCCGACGCAAGAAA CCCCGCGCCTCG ACTG CGAGACGCGGGG TCCTTGGCCGGCGAC TERM 1051 1591334 - 1591361 + r 86 -18.4 -2.70932 | opp_overlap 1591334 TGCCGACGCAAGAAA CCCCGCGCCTCG ACTG CGAGACGCGGGG TCCTTGGCCGGCGAC Rmet_5050 1593536 - 1591434 - | hypothetical protein TERM 1052 1591819 - 1591875 + g 77 -12.7 -3.34455 | opp_overlap 1591844 TGGCGCAGCGTATCC GGCGACGGCGGCGGTGTGCGCAAACGC ACC GCGTAGGTGTAGGCCGGCGCCGCCGCA TTGCCTTTCTGGTAG Rmet_5051 1594445 - 1593585 - | hypothetical protein Rmet_5052 1594741 - 1595799 + | twin-arginine translocation pathway signal Rmet_5053 1597478 - 1595868 - | ABC transporter related TERM 1053 1596498 - 1596466 - G 75 -12 -3.53811 | gap 1 TCCAGTTCGGCCAAA CGCTGCG-TGCCAGC GCCC ACTGGCGTCGCAGCG AAAACGATTGGCGCG TERM 1054 1597441 - 1597418 - G 70 -5.2 -4.41548 | overlap 1597419 CGAGATCGGAGAAAA GTGTTCTGCC GTCC GGCAGGACAA AAGACACGCCTTCCA TERM 1055 1597664 - 1597634 - R 100 -22.6 -3.29144 | opp_overlap 1597628 GCATCGCGTGCAGAA GGGCACTGACCGGG CCG CCCGGCCAGCGCCC ACGCTCGTTACAGGC Rmet_5054 1598865 - 1597672 - | peptidase M24 Rmet_5055 1599862 - 1598894 - | hypothetical protein Rmet_5056 1599988 - 1600422 + | hypothetical protein Rmet_5057 1601135 - 1600491 - | TetR family transcriptional regulator Rmet_5058 1601383 - 1602369 + | hypothetical protein TERM 1056 1602597 - 1602569 - g 87 -15.3 -3.63991 | overlap 1602572 CACCATCGTCAACAA CAACGCCGGCAAC GGC GATGCCGGCATTG CCGCGCTGATCCGCG TERM 1057 1602594 - 1602572 - g 81 -11.2 -3.95324 | overlap 1602569 CATCGTCAACAACAA CGCCGGCAAC GGC GATGCCGGCA TTGCCGCGCTGATCC Rmet_5059 1602411 - 1603091 + | 3-oxoacid CoA-transferase, subunit A Rmet_5060 1603084 - 1603785 + | butyryl-CoA:acetate CoA transferase Rmet_5061 1603838 - 1604845 + | hypothetical protein Rmet_5062 1605754 - 1604864 - | intradiol ring-cleavage dioxygenase Rmet_5063 1606863 - 1605796 - | iron-containing alcohol dehydrogenase TERM 1058 1606026 - 1606060 + g 73 -12.2 -3.4072 | gap 2, overlap 1606018 CACCCAGCGCCCGCG CCACGCGTGCCAGCGC AAGTG GCGC-GGCG-GCGTGG TTGTAGTGCGCGGTA Rmet_5064 1607430 - 1606972 - | hypothetical protein TERM 1059 1607093 - 1607061 - G 75 -11.9 -3.46783 | overlap 1607059 1607062 1607064 1607079 GATCGAACTCAAACA GCACCGTCGACGACA GGA TGTCGCCGCCGGCGA ACAGCGGACCGATAA TERM 1060 1607092 - 1607062 - G 78 -15.4 -2.67588 | overlap 1607061 1607059 1607064 1607079 ATCGAACTCAAACAG CACCGTCGACGACA GGA TGTCGCCGCCGGCG AACAGCGGACCGATA TERM 1061 1607090 - 1607064 - G 73 -14.4 -2.87581 | overlap 1607062 1607061 1607059 1607079 CGAACTCAAACAGCA CCGTCGACGACA GGA TGTCGCCGCCGG CGAACAGCGGACCGA TERM 1062 1607488 - 1607471 - R 100 -14.1 -4.72986 | GAGGCCCAGGAAAAA CGCCCGC AAAA GCGGGCG TCAATGCAGGTGCCA Rmet_5065 1607946 - 1607542 - | hypothetical protein Rmet_5066 1609247 - 1607943 - | major facilitator transporter TERM 1063 1609394 - 1609380 - R 76 -5.6 -4.67982 | overlap 1609382 GTGTAGGTAAGAAAA CGTGGT CGC ACCGCG CTCAGGTGTCCGCCC Rmet_5067 1610626 - 1609439 - | major facilitator transporter Rmet_5068 1611148 - 1610654 - | GCN5-related N-acetyltransferase Rmet_5070 1611617 - 1612726 + | hydroxyneurosporene-O-methyltransferase Rmet_5071 1612967 - 1613467 + | hypothetical protein Rmet_5072 1613839 - 1613708 - | hypothetical protein Rmet_5073 1615160 - 1614132 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1064 1614981 - 1614958 - G 78 -7.4 -4.37658 | AACGTGGTGACAAAA TGCTGACGAG TTTG CTCGCCATCA CTGACAATATCAATG Rmet_5074 1616179 - 1615190 - | hypothetical protein Rmet_5075 1616833 - 1616240 - | NADPH-dependent FMN reductase TERM 1065 1617752 - 1617766 + H 71 -7.8 -4.08706 | CCTGCAGTCGAGCCC GAGCGG CGC CTGCTC TTTCTCTCCTCCACC Rmet_5076 1617795 - 1618223 + | hypothetical protein Rmet_5079 1619296 - 1620354 + | hypothetical protein TERM 1066 1620408 - 1620430 + F 100 -17.8 -5.11063 | CGTCGATGTTTGCGC CGCCCTCTCA ATT TGAGAGGGCG TTTTTCTTGGCTCAT TERM 1067 1620719 - 1620729 + F 73 -4.6 -4.66537 | overlap 1620711 ACTTCGCTCGGGAAC GGCC GAT GGTC TTTTCTGTTGCACGC Rmet_5080 1620992 - 1621684 + | hypothetical protein TERM 1068 1623228 - 1623204 - g 78 -13.5 -3.53091 | ACGCCCTGGCGCAAA GCGCGCGCGAC ATC GCCACGCACGC CGAGGCTCACGCGAC TERM 1069 1623708 - 1623684 - g 78 -13.5 -3.53091 | ACGCCCTGGCGCAAA GCGCGCGCGAC ATC GCCACGCACGC CCAGGCTCACACCAC Rmet_5081 1621694 - 1624789 + | hypothetical protein TERM 1070 1625271 - 1625301 + G 71 -12 -3.29461 | gap 1, opp_overlap 1625278 CGTAACCCGCGCGCT GATCGAAGC-GGG CCTGCC CCCGGCTTCGATC TTCTCGGCGGCATTC Rmet_5082 1624786 - 1625439 + | hypothetical protein TERM 1071 1625501 - 1625515 + G 79 -11.4 -3.89215 | AGCGGCGCAGACCGT GCGGAC CCC GTCCGC TTTCGCTTTATCGAG Rmet_5083 1625432 - 1626130 + | hypothetical protein Rmet_5084 1626280 - 1626723 + | cupin 2, barrel Rmet_5085 1627521 - 1626766 - | transcriptional regulator TERM 1072 1627611 - 1627641 + H 77 -11.2 -3.68073 | opp_overlap 1627611, overlap 1627612 CAATTTATCCGATAA TTTGCGTATCCGCA ATT TGCGTATTCGCAAA TTCTTGAATACACTC TERM 1073 1627641 - 1627611 - H 72 -11.2 -3.33969 | opp_overlap 1627611 1627612 CAATTTATCCGATAA TTTGCGTATCCGCA ATT TGCGTATTCGCAAA TTCTTGAATACACTC Rmet_5086 1627722 - 1628879 + | FAD dependent oxidoreductase Rmet_5087 1628962 - 1630410 + | hypothetical protein TERM 1074 1631618 - 1631588 - g 72 -8.2 -4.1585 | overlap 1631617 CTACAAGGGTGAAAA GGTGGTGTTGCTGG TGC CCACCGACATCACC GCGCTGAACGCCGAG Rmet_5088 1630488 - 1632071 + | extracellular solute-binding protein Rmet_5089 1632083 - 1633018 + | binding-protein-dependent transport systems inner membrane component Rmet_5090 1633025 - 1633924 + | binding-protein-dependent transport systems inner membrane component Rmet_5091 1633938 - 1634984 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Rmet_5092 1634981 - 1635994 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein TERM 1075 1637502 - 1637458 - g 100 -25.1 -3.14344 | overlap 1637473 TACCGGCGCCAGGAA CGGCCAGGTCATCAAGCGTCG TCA CGCCGCCTGATGACCTGGCGG GAAGCACCGAGGCCG Rmet_5093 1636007 - 1637491 + | D-aminoacylase-like protein Rmet_5094 1637805 - 1638674 + | enoyl-CoA hydratase Rmet_5095 1639750 - 1638740 - | malate/L-lactate dehydrogenase TERM 1076 1639263 - 1639229 - G 100 -14.4 -4.22041 | gap 1, opp_overlap 1639225 AAAGTCGAAGACAAA TGGCGTTCTGCCCGG ACGCGG CCAGGC-GAACGCCA GGGGATTCGTTCCGA TERM 1077 1639727 - 1639708 - G 71 -10.7 -3.65827 | GAACGTTGAGCGAAA GCTCGCG TACCTC CGCGAGC GAGAGCTGGATGGTT Rmet_5096 1641275 - 1639788 - | aldehyde dehydrogenase TERM 1078 1639860 - 1639846 - G 85 -7.8 -4.63486 | overlap 1639847 1639858 ACGGGCCGAAGAAAA CGCTGC AAG GCAGCA TACCCGACCGACGTG Rmet_5097 1642307 - 1641363 - | dihydrodipicolinate synthetase TERM 1079 1642810 - 1642781 - g 81 -5 -4.9645 | opp_overlap 1642783, overlap 1642783 ACGACAACAACAAAA GATCTGC-GCCGCG TTGT CGCGGCTGC-GATG GTTGGGTCCGTAGCG TERM 1080 1642808 - 1642783 - g 71 -7.6 -4.08992 | opp_overlap 1642783, overlap 1642781 GACAACAACAAAAGA TCTGC-GCCGCG TTGT CGCGGCTGC-GA TGGTTGGGTCCGTAG Rmet_5098 1642709 - 1644088 + | major facilitator transporter TERM 1081 1644108 - 1644136 + T 95 -13.2 -4.09864 | opp_overlap 1644113, overlap 1644113 AGTCTCCGAGCAACA AAAAAGCCGCCC TCTCC GGGCGGCTTTTG TTTTCGGGCCTGGCT TERM 1082 1644131 - 1644113 - T 100 -13.1 -5.5112 | opp_overlap 1644108 1644113 CCGAGCAACAAAAAA GCCGCCC TCTCC GGGCGGC TTTTGTTTTCGGGCC TERM 1083 1644113 - 1644131 + T 100 -13.1 -5.07652 | opp_overlap 1644113, overlap 1644108 CCGAGCAACAAAAAA GCCGCCC TCTCC GGGCGGC TTTTGTTTTCGGGCC Rmet_5099 1644894 - 1644172 - | GntR family transcriptional regulator TERM 1084 1644265 - 1644249 - G 79 -15.1 -3.01924 | TATGCCGCTTCAACA GCGCGGC GGC GCCGCGC CCATCCCCTTTGCGA TERM 1085 1644862 - 1644895 + g 74 -5.4 -4.49337 | gap 2, opp_overlap 1644869, overlap 1644869 GGTGACCATTGGAAG T-TG-ACAACGGCGCC ACCT GGCGCCGTTTTGCATA TTTTCTACATTCTAC TERM 1086 1644886 - 1644869 - G 80 -14.1 -3.36671 | opp_overlap 1644869 1644862 ATTGGAAGTTGACAA CGGCGCC ACCT GGCGCCG TTTTGCATATTTTCT TERM 1087 1644869 - 1644886 + g 100 -14.1 -4.36485 | opp_overlap 1644869, overlap 1644862 ATTGGAAGTTGACAA CGGCGCC ACCT GGCGCCG TTTTGCATATTTTCT Rmet_5100 1645608 - 1644928 - | GntR family transcriptional regulator TERM 1088 1645406 - 1645386 - G 71 -10.4 -3.62224 | opp_overlap 1645386 ACAGCTCCGCAACAA TCGCCCCC TTGTG GGGGACGA TCTTCACCAGCCCTT Rmet_5101 1646666 - 1645719 - | LysR family transcriptional regulator Rmet_5102 1646744 - 1647820 + | zinc-binding alcohol dehydrogenase Rmet_5103 1648430 - 1647897 - | bifunctional deaminase-reductase-like protein TERM 1089 1648033 - 1647993 - G 71 -10.4 -3.61715 | gap 1, overlap 1647994 CAGCGCCCCGAACAA CGGCCGCC-CGGCTCCGAT CAAC ACCGGAACCGTGGTGACCA CCAGATCGGCGATCA Rmet_5104 1648600 - 1649637 + | bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase Rmet_5105 1649723 - 1651156 + | putative nicotinate phosphoribosyltransferase TERM 1090 1651177 - 1651204 + F 78 -13.4 -3.23899 | gap 1, overlap 1651171 GTCGATGTCTGCCCT GGG-GCCGGCAGC AGT GCTTCCGGCTCCC TTCCATTGCTTCCCA Rmet_5106 1651328 - 1652275 + | LysR family transcriptional regulator Rmet_5107 1653058 - 1652282 - | enoyl-CoA hydratase Rmet_5108 1654052 - 1653072 - | hypothetical protein Rmet_5109 1655287 - 1654103 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5110 1657484 - 1655337 - | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase TERM 1091 1656633 - 1656617 - G 70 -2.1 -4.63218 | opp_overlap 1656620, overlap 1656619 1656620 GCTCGGCGAAGAAAA TATGGCG CAG CGCCTTC GACTCGTTGCCCGCA Rmet_5111 1658701 - 1657529 - | thiolase Rmet_5112 1659096 - 1658698 - | hypothetical protein Rmet_5113 1660097 - 1659105 - | hypothetical protein TERM 1092 1659204 - 1659216 + g 71 -10.5 -3.6149 | CGGATTCAGATTGCC CGCCG CCT CGGCG TTCTGCTTCTTGAGT TERM 1093 1660156 - 1660166 + H 72 -2.4 -4.85782 | opp_overlap 1660154, overlap 1660134 CGTGCGTTGGAAATG CCGG GGG CCAG TTTATTTTTGAGGAC Rmet_5114 1660648 - 1662036 + | glutamate dehydrogenase TERM 1094 1662120 - 1662097 - f 93 -16.8 -3.34013 | opp_overlap 1662097 CAGCCCGGGAAGGAA TGCGACGAGG CAAG CCTCGTCGCA TTTTCTTTTGCCCGC TERM 1095 1662097 - 1662120 + F 100 -16.8 -5.07652 | opp_overlap 1662097 CAGCCCGGGAAGGAA TGCGACGAGG CAAG CCTCGTCGCA TTTTCTTTTGCCCGC Rmet_5115 1662226 - 1662837 + | lysine exporter protein LysE/YggA Rmet_5116 1663930 - 1662911 - | fimbrial protein Rmet_5117 1664102 - 1664587 + | hypothetical protein Rmet_5118 1664825 - 1665892 + | porin TERM 1096 1665947 - 1665967 + F 100 -18.3 -5.64421 | GGCAAGAGGGTTCTT GGCCTCCGG CTT CCGGAGGCC TTTTTTGTTTGCCAT Rmet_5119 1666289 - 1667188 + | taurine catabolism dioxygenase TauD/TfdA Rmet_5120 1667213 - 1668274 + | hypothetical protein TERM 1097 1668309 - 1668339 + F 89 -17.6 -3.23216 | CATCCTGCTCGCCAA TGCCCCGATAGCCG ATC TGGCAATCGGGGCA TTCGTCATCCTACGG Rmet_5121 1668515 - 1668943 + | molybdenum-pterin binding domain-containing protein TERM 1098 1669018 - 1668988 - T 100 -11.9 -4.87626 | gap 1, overlap 1668989 CGGCAACATGAAAAA GGCTCCGGT-GACG ATGC CGTCCACCGGAGCA CGGACCTAGCAATAG TERM 1099 1669017 - 1668989 - T 93 -15.4 -3.51853 | gap 1, overlap 1668988 GGCAACATGAAAAAG GCTCCGGT-GACG ATGC CGTCCACCGGAGC ACGGACCTAGCAATA Rmet_5122 1670968 - 1669058 - | Poly-beta-hydroxybutyrate polymerase-like protein TERM 1100 1670885 - 1670912 + g 72 -13.4 -3.08996 | gap 1, overlap 1670876 1670875 TGGCTTGGGTGAGGT GGCCTTCGCCCGT TTG GCGGGCGG-GGCC TGTTCGATCAGCGTA Rmet_5123 1671718 - 1670972 - | 3-oxoacyl-[acyl-carrier-protein] reductase Rmet_5124 1672263 - 1671715 - | hypothetical protein TERM 1101 1672465 - 1672440 - H 85 -12.6 -3.794 | CTTGAATGCACTAAA CGCGGCCGAT TCCTGT ATCGACCGCG TGCCGGTCAAGTCCA Rmet_5125 1672726 - 1674219 + | hypothetical protein Rmet_5126 1675181 - 1674258 - | hypothetical protein TERM 1102 1675128 - 1675109 - G 75 -9.2 -3.95584 | opp_overlap 1675122 CCGCCACCAAGCAAA GCCACGGC AGCA GCCGTTGC AGCACGGATCGCGCC Rmet_5127 1675421 - 1677385 + | sigma-54 dependent trancsriptional regulator Rmet_5128 1678964 - 1677444 - | aldehyde dehydrogenase Rmet_5129 1680542 - 1679196 - | periplasmic sensor signal transduction histidine kinase TERM 1103 1679687 - 1679641 - G 88 -17.3 -3.05844 | GGGCGGATCGCAACA CT-TCGCCCGCCCGCGCCGGCGG CAC CCACC-GCGCGGGCCCGCGACAG ATGCCGATCCACCTG Rmet_5130 1681210 - 1680539 - | two component transcriptional regulator Rmet_5131 1681578 - 1681216 - | hypothetical protein Rmet_5132 1682880 - 1681882 - | hypothetical protein Rmet_5133 1684156 - 1682981 - | acyl-CoA dehydrogenase-like protein TERM 1104 1683303 - 1683341 + g 77 -15.8 -2.62184 | opp_overlap 1683303 TGGATGGCCTGGAAA CGCGCGATCGGGCCGCCA AAC TGGCGGCGCGCGCCCGCG TACTGTACCGACGCC TERM 1105 1683341 - 1683303 - G 90 -15.8 -3.53811 | opp_overlap 1683303 TGGATGGCCTGGAAA CGCGCGATCGGGCCGCCA AAC TGGCGGCGCGCGCCCGCG TACTGTACCGACGCC Rmet_5134 1685720 - 1684167 - | AMP-dependent synthetase and ligase TERM 1106 1685264 - 1685306 + g 82 -15.7 -3.14344 | gap 1, opp_overlap 1685271 GGTCGTCAGGCTGCG GCACATAGTCGATGGCGGTG GTGG CGCCGCCATCGATCA-GTGC TTCATAGGCACCGTA Rmet_5135 1685829 - 1686719 + | LysR family transcriptional regulator Rmet_5136 1686716 - 1687501 + | hypothetical protein Rmet_5137 1688174 - 1687503 - | ribonucleoside-triphosphate reductase, anaerobic-like protein TERM 1107 1688137 - 1688159 + g 71 -10.5 -3.63627 | GGAAAGTCGATGCTG GTCAGCGGC GTGAA GCCGCCGAC TTTCAGGTCTGCCAC Rmet_5138 1688373 - 1688182 - | hypothetical protein TERM 1108 1688422 - 1688441 + r 70 -10.6 -3.53091 | opp_overlap 1688420 1688419 AAAATCGGGAAACCT CACGCCGC CAGC GCGGCGCG TTTGCGCGCGAGAAT Rmet_5139 1690145 - 1688421 - | anaerobic ribonucleoside triphosphate reductase Rmet_5140 1691933 - 1690356 - | acyl-CoA synthetase TERM 1109 1691998 - 1691981 - R 82 -11.3 -3.86897 | GGTACTGGTGACAAA TGGCGTC GAGG GACGCCA ATGCGGGCACTCAGA Rmet_5141 1693247 - 1692009 - | acyl-CoA dehydrogenase-like protein TERM 1110 1693074 - 1693098 + g 71 -7.8 -4.08767 | gap 1 CGGCCAGTTCGGCGC GGCCCAGCCAC GCGC GTG-CAGGGCC TTTTGCCAGCGTACC Rmet_5142 1694434 - 1693256 - | acyl-CoA dehydrogenase-like protein Rmet_5143 1695472 - 1694489 - | acyl-CoA dehydrogenase-like protein TERM 1111 1695190 - 1695210 + g 71 -13.9 -2.72144 | overlap 1695189 CGATCGTGATCATGC CCGCGGGCG CCC CGCCCCCGG ATTTCGAGAGAATCG Rmet_5144 1696648 - 1695491 - | acyl-CoA dehydrogenase-like protein TERM 1112 1696730 - 1696695 - R 100 -8.8 -5.0538 | opp_overlap 1696696, overlap 1696657 1696697 1696725 CGTCAGTGCAAAAAA CCGGCACGGTGCTGCC GTGT GTCCGCAACACGCCGG CAACCGGTGCCTCAC Rmet_5145 1697550 - 1696768 - | enoyl-CoA hydratase Rmet_5146 1698027 - 1697569 - | MaoC-like dehydratase Rmet_5147 1698993 - 1698031 - | hypothetical protein TERM 1113 1698129 - 1698151 + g 74 -12.7 -3.29144 | opp_overlap 1698106 GAGATCCCGGCATCG GCTGCGCGC CGATT GCGCGTAGC TTCTCGACCAGCTCA Rmet_5148 1700251 - 1699028 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5149 1700485 - 1701471 + | hypothetical protein Rmet_5150 1701517 - 1702311 + | enoyl-CoA hydratase Rmet_5151 1702521 - 1703429 + | LysR family transcriptional regulator Rmet_5152 1704641 - 1703496 - | acyl-CoA dehydrogenase-like protein Rmet_5153 1705686 - 1704697 - | hypothetical protein TERM 1114 1705702 - 1705721 + r 100 -6.4 -5.88565 | TTGTCGTCTCCTGAT TGGTTGTG TCGG CTCAACCA TTTTTTTCTTGTCAC TERM 1115 1705842 - 1705814 - R 86 -13.9 -3.55444 | gap 1, opp_overlap 1705820 GCTGCAGCCGCGAAA GGCCGCCCCTGA TCAGGC TC-GGGGCGGCC AATCCAGACAGGGTG Rmet_5154 1706622 - 1705858 - | enoyl-CoA hydratase Rmet_5155 1707400 - 1706633 - | short-chain dehydrogenase/reductase SDR Rmet_5156 1708616 - 1707438 - | thiolase Rmet_5157 1708828 - 1709640 + | IclR family transcriptional regulator TERM 1116 1711081 - 1711055 - g 82 -15.8 -3.05715 | AAGGCCGTGATCGAA CTGCGTGACGGC AAG GCCGCCACGCCG GATCTGGCGCAGGAC Rmet_5158 1709684 - 1711267 + | AMP-dependent synthetase and ligase TERM 1117 1711296 - 1711282 - f 72 -12.8 -3.07935 | opp_overlap 1711278 ACCGTACCGACTCAA GGCGGC CCG GCCGCC TGATGGTTGGCGGGT TERM 1118 1711569 - 1711588 + G 76 -5.6 -4.56597 | overlap 1711530 CGCGCGGCGTGGTGC TGTCGCGC TATG GCGAGGCA TTTTTGCGGCGCGCG Rmet_5159 1711400 - 1712356 + | LysR family transcriptional regulator TERM 1119 1713702 - 1713732 + G 71 -13.2 -2.98823 | opp_overlap 1713723 GCTCAAGGCCGAATG GCTGCGCGCCCGCT CGA AACAGGTGCGCAGC TATGTGTCGCGCAGC Rmet_5160 1712557 - 1713810 + | beta-lactamase-like protein Rmet_5161 1713820 - 1714845 + | hypothetical protein Rmet_5162 1714867 - 1716165 + | hypothetical protein TERM 1120 1716283 - 1716257 - T 73 -10.1 -3.61517 | AGGTTCCTTTAAGAA GCTTGCGCATC TCGCT GTCGCGCAAGC GGGGCACGGCCCGCC TERM 1121 1716338 - 1716352 + T 79 -8.6 -4.43815 | overlap 1716334 GCGTCATCGCATCGG CGAATC CCC GATTCG TTTTCATATATTAGT Rmet_5163 1716552 - 1716394 - | autotransporter Rmet_5164 1716581 - 1716910 + | hypothetical protein Rmet_5165 1717136 - 1717831 + | two component LuxR family transcriptional regulator TERM 1122 1719133 - 1719103 - g 71 -10.5 -3.61517 | gap 1, overlap 1719089 ACCCGTCTGCAAGAA CGCC-TGCAGATCG CGCA CGACCTGCATGACG GCGTGGGCGGATCGC TERM 1123 1719466 - 1719484 + G 84 -13.8 -3.65351 | opp_overlap 1719464 GTTGTCAAGCACAGC CGCGCGCG GCG CGTGCGCG TTTGCCTGGAACTCC Rmet_5166 1717828 - 1719750 + | putative signal transduction histidine kinase Rmet_5167 1719840 - 1720247 + | twin-arginine translocation pathway signal Rmet_5168 1720353 - 1720592 + | hypothetical protein Rmet_5169 1720632 - 1721054 + | LysR family transcriptional regulator Rmet_5170 1721127 - 1721501 + | NUDIX hydrolase TERM 1124 1721791 - 1721817 + T 82 -12.2 -3.62522 | opp_overlap 1721791 CACGAAATAGAAAAA GCCCCGCCGG TTTTCTC CCGGCAGGGC TTCTTGCGCAACTTC TERM 1125 1721817 - 1721791 - T 100 -14.4 -5.22289 | opp_overlap 1721791 CACGAAATAGAAAAA GCCCCGCCGG TTTTCTC CCGGCAGGGC TTCTTGCGCAACTTC Rmet_5171 1722223 - 1721843 - | cold-shock DNA-binding protein family protein TERM 1126 1722837 - 1722787 - H 76 -12.6 -3.35813 | gap 1, opp_overlap 1722832, overlap 1722788 1722831 CCTGATTCGAATCAA TGGCGCATGGCCCC-CTCGCATC CAGCGC GATGCGAGCGAATCCACGCGCCG GTCCGCTCCGGTACG TERM 1127 1722836 - 1722788 - H 78 -16.1 -2.61274 | gap 1, opp_overlap 1722832, overlap 1722787 1722831 CTGATTCGAATCAAT GGCGCATGGCCCC-CTCGCATC CAGCGC GATGCGAGCGAATCCACGCGCC GGTCCGCTCCGGTAC Rmet_5172 1723149 - 1723421 + | hypothetical protein Rmet_5173 1723635 - 1723919 + | hypothetical protein Rmet_5174 1724048 - 1724479 + | hypothetical protein Rmet_5175 1724909 - 1725172 + | hypothetical protein Rmet_5176 1725200 - 1725421 + | translation initiation factor IF-1 Rmet_5177 1725914 - 1725543 - | hypothetical protein Rmet_5178 1725959 - 1726693 + | hypothetical protein Rmet_5179 1727278 - 1726823 - | hypothetical protein Rmet_5180 1728232 - 1727984 - | hypothetical protein Rmet_5181 1728824 - 1728306 - | hypothetical protein Rmet_5182 1728969 - 1729610 + | hypothetical protein Rmet_5183 1729892 - 1730341 + | hypothetical protein Rmet_5184 1731070 - 1730642 - | phenylacetic acid degradation-related protein Rmet_5185 1731775 - 1732452 + | carbonic anhydrase Rmet_5186 1732472 - 1733161 + | Ion transport 2 Rmet_5187 1735112 - 1733172 - | putative Ig Rmet_5188 1735775 - 1736056 + | galactose-binding protein regulator TERM 1128 1736674 - 1736659 - g 71 -11.8 -3.29144 | overlap 1736660 CGATGCGTTCTACAA GGCCGC CATG GCGGCC GGCGGCCGCGACAAC Rmet_5189 1736408 - 1736794 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_5190 1737943 - 1736828 - | porin Rmet_5191 1739488 - 1738061 - | amino acid permease-associated region Rmet_5192 1740752 - 1739523 - | kynureninase Rmet_5193 1741347 - 1740823 - | 3-hydroxyanthranilate 3,4-dioxygenase Rmet_5194 1742580 - 1741516 - | LysR family transcriptional regulator TERM 1129 1742732 - 1742706 - H 70 -13 -2.88427 | overlap 1742710 1742712 AATACGCGGGAGAGA GGAAGACGCCGC CAG GCGAGGTCTTCC GCACGATGGCAGGGG Rmet_5195 1742738 - 1743886 + | porin Rmet_5196 1743864 - 1745801 + | hypothetical protein TERM 1130 1745807 - 1745842 + G 73 -12.5 -3.34398 | gap 1, opp_overlap 1745784 1745783 1745805, overlap 1745801 1745806 1745808 GCGACGCTAAGCATG TCGGCCCGCCATGCCT TGCGT GGGCC-GGCGGGCCGG TCTTTCAGGCGACAC TERM 1131 1745808 - 1745841 + G 70 -13.8 -2.60496 | gap 1, opp_overlap 1745784 1745783 1745805, overlap 1745801 1745807 1745806 CGACGCTAAGCATGT CGGCCCGCCATGCCT TGCGT GGGCC-GGCGGGCCG GTCTTTCAGGCGACA TERM 1132 1745921 - 1745967 + G 93 -17.2 -3.65046 | gap 1, overlap 1745922 GCGGTGTTCTCCACT TGGGCGGCCGTGCTCGGCCTG TTGAAT CCGGCCGCGCACG-CCGCCCC TTCTTCCAGTGAGGA TERM 1133 1745922 - 1745966 + G 100 -20.7 -2.78813 | gap 1, overlap 1745921 CGGTGTTCTCCACTT GGGCGGCCGTGCTCGGCCTG TTGAAT CCGGCCGCGCACG-CCGCCC CTTCTTCCAGTGAGG Rmet_5197 1745804 - 1746220 + | cytochrome c, class I TERM 1134 1746245 - 1746220 - T 84 -16.9 -2.73364 | GGGCCAGCGCAACTA GTGGCAGCCGA CGCG CCGGCTGCCAC ATGCGCGCCGGCGGC Rmet_5198 1747221 - 1746268 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_5199 1747418 - 1748356 + | fumarylacetoacetate (FAA) hydrolase Rmet_5200 1748411 - 1749016 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1135 1749051 - 1749018 - f 89 -17.5 -3.14344 | gap 1, opp_overlap 1749015 GAGCGGGCGCATGAA CGGGAGCGCC-ATGCC GGT GGCATCGGCGTTCCCG GGACTCTCGTCCTCG TERM 1136 1749424 - 1749462 + G 76 -13.8 -3.06183 | gap 1, overlap 1749426 CCGGAGGCGTCCTAT CC-CGCCGGCGCCGAGG ATGTGG CCATGGCGCTGGCGTGG TTGCGTGCCCATGCA TERM 1137 1749426 - 1749459 + G 75 -15.2 -2.75183 | overlap 1749424 GGAGGCGTCCTATCC CGCCGGCGCCGAGG ATGTGG CCATGGCGCTGGCG TGGTTGCGTGCCCAT Rmet_5201 1749028 - 1749960 + | lipase, active site Rmet_5202 1750028 - 1750930 + | dihydrodipicolinate synthetase Rmet_5203 1750927 - 1751370 + | endoribonuclease L-PSP Rmet_5204 1751367 - 1751960 + | hypothetical protein Rmet_5205 1752039 - 1753031 + | hypothetical protein TERM 1138 1753177 - 1753205 + G 100 -15.3 -4.61633 | opp_overlap 1753174, overlap 1753180 CTATCGGAACTACGT GGATGGCCGCTTC GAG GAAGCGGCCAATC TTTTTCCCAATCTCT TERM 1139 1753180 - 1753202 + G 88 -17.8 -2.94422 | opp_overlap 1753174, overlap 1753177 TCGGAACTACGTGGA TGGCCGCTTC GAG GAAGCGGCCA ATCTTTTTCCCAATC Rmet_5206 1753142 - 1754605 + | aldehyde dehydrogenase Rmet_5207 1754625 - 1755446 + | hydratase/decarboxylase Rmet_5208 1755448 - 1756392 + | acetaldehyde dehydrogenase Rmet_5209 1756403 - 1757440 + | 4-hydroxy-2-ketovalerate aldolase TERM 1140 1758167 - 1758182 + G 70 -7.5 -4.00042 | opp_overlap 1758166 TTTCGGCAACGATAG GCGCG CTTGGC CGCGC TTCTTTCCTGGCGGC Rmet_5210 1757437 - 1758201 + | hydratase/decarboxylase Rmet_5211 1758253 - 1758690 + | endoribonuclease L-PSP Rmet_5212 1758687 - 1759688 + | amidohydrolase 2 TERM 1141 1759710 - 1759738 + T 80 -14.6 -3.05816 | overlap 1759704 1759713 CGCTGCACATCGGTG CTCCGCCGCTGT ATCGG ACAGCGGCGGAC TTGGATGCCGCCTCG Rmet_5213 1760426 - 1759761 - | GntR family transcriptional regulator TERM 1142 1759948 - 1759981 + g 72 -11 -3.53224 | TCGACGCCCGACTGC GCC-GCGCGGAACGGC GCCA GCCGCTC-GCGCAGGC TTTCCACCGCAGCTA Rmet_5214 1760631 - 1761104 + | glyoxalase/bleomycin resistance protein/dioxygenase Rmet_5215 1762929 - 1761739 - | hypothetical protein TERM 1143 1761839 - 1761850 + gT 71 -7.2 -4.18018 | TCGGCCAGTGCCTCT CGCG GATA CGCG TTTTGCGTGACGAAC Rmet_5216 1764172 - 1762904 - | hypothetical protein Rmet_5217 1765482 - 1764169 - | hypothetical protein TERM 1144 1764964 - 1764936 - G 74 -2.4 -4.82901 | gap 1, opp_overlap 1764955 CGTCGCGCAGAAAAA CTTCACTGGCC TTGTAGTC GGCCCG-GAAG CCTGGGACTGGTATC TERM 1145 1765130 - 1765106 - G 71 -7.8 -4.1466 | gap 1, overlap 1765107 1765110 1765120 ATGGAATTGTGAAAA GCGA-GCGCGC CAAA GCGCGCCTCGA GCCTGGCTGCGACAT Rmet_5218 1765627 - 1765875 + | hypothetical protein Rmet_5219 1766037 - 1766603 + | hypothetical protein Rmet_5220 1767954 - 1767028 - | LysR family transcriptional regulator Rmet_5221 1767996 - 1769039 + | twin-arginine translocation pathway signal Rmet_5222 1769036 - 1770232 + | peptidase M20D, amidohydrolase Rmet_5223 1770674 - 1771141 + | hypothetical protein TERM 1146 1771246 - 1771217 - T 76 -12.1 -3.35371 | TACATTGGCAACGAA GCAGGCGACGTGT CCGA ACATGCCGCCCGC CATAAAGACCAAAGC Rmet_5224 1772524 - 1771556 - | hypothetical protein Rmet_5225 1773752 - 1772706 - | hypothetical protein Rmet_5226 1775259 - 1773817 - | hypothetical protein Rmet_5227 1776290 - 1775343 - | alpha/beta hydrolase fold Rmet_5228 1777851 - 1776322 - | FAD dependent oxidoreductase Rmet_5229 1777951 - 1778970 + | AraC family transcriptional regulator Rmet_5230 1781013 - 1779508 - | aminotransferase, class V Rmet_5231 1781442 - 1782086 + | ArsR family transcriptional regulator Rmet_5232 1782090 - 1783451 + | cytochrome bd ubiquinol oxidase, subunit I Rmet_5233 1783448 - 1784485 + | cytochrome d ubiquinol oxidase, subunit II Rmet_5234 1784535 - 1785467 + | hypothetical protein Rmet_5235 1785608 - 1788001 + | tetratricopeptide TPR_2 Rmet_5236 1788014 - 1789159 + | DegT/DnrJ/EryC1/StrS aminotransferase Rmet_5237 1789162 - 1789863 + | WbnG Rmet_5238 1789860 - 1790834 + | hypothetical protein Rmet_5239 1790860 - 1791639 + | phytanoyl-CoA dioxygenase Rmet_5240 1791644 - 1792381 + | methyltransferase type 12 Rmet_5241 1792393 - 1793682 + | hypothetical protein Rmet_5242 1793692 - 1794456 + | hypothetical protein TERM 1147 1794718 - 1794736 + G 71 -10.2 -3.61398 | opp_overlap 1794709 1794710 CGAAAAGGGCTTCCA GGCCTACG AGC CGGAGGCC TTCTTCGCCACGACC Rmet_5243 1794503 - 1795198 + | methyltransferase type 11 Rmet_5244 1796768 - 1795227 - | major facilitator transporter TERM 1148 1796061 - 1796015 - G 78 -7.3 -4.34402 | gap 1 CCTGCCAGATGAAAA GCACCAGACCGATCAGCCCG GCAGCCAG CAGGCCGATCG-TCTGCGGC TCCAGCGGCGAGTGG Rmet_5245 1797844 - 1796933 - | LysR family transcriptional regulator Rmet_5246 1797954 - 1798508 + | hypothetical protein Rmet_5247 1799436 - 1798465 - | LysR family transcriptional regulator TERM 1149 1799562 - 1799549 - g 75 -3.8 -4.61147 | CAAGAGGAGACAAAA TGCG GCGAAT CGCA AGGCGACTGGCATGG Rmet_5248 1799548 - 1800549 + | hypothetical protein TERM 1150 1800699 - 1800689 - g 77 -8.2 -4.28254 | overlap 1800690 GCTGAAGATGGAAAA CGCC AAT GGCG GCGATGTCATGCGCA TERM 1151 1801660 - 1801627 - g 74 -14.6 -2.56095 | gap 1, overlap 1801623 GCGACACCGAAGTCA TGTCGCCGGGC-CTG GGCTT CGGTGCCCGGCGACA TCCGGGCTAATCCGG Rmet_5249 1800558 - 1801670 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1152 1801753 - 1801801 + T 70 -10.7 -3.53012 | overlap 1801754 TCAGAACGTTTCCCA ATCGCCGCCATCGGCCGTCGCGG GCA CCGGTGCGGCCGATGGCCTCGCC TTTGCCACGGGCCGA TERM 1153 1801754 - 1801800 + T 73 -14.2 -2.71712 | overlap 1801753 CAGAACGTTTCCCAA TCGCCGCCATCGGCCGTCGCGG GCA CCGGTGCGGCCGATGGCCTCGC CTTTGCCACGGGCCG Rmet_5250 1803771 - 1801738 - | methyl-accepting chemotaxis sensory transducer TERM 1154 1803015 - 1802998 - G 81 -14.1 -3.54424 | overlap 1802979 GCCGAGCTGGCCAAA GGCGCGC TCGA GCGCGCC GAGCATCCGGCCCAT TERM 1155 1803258 - 1803277 + g 70 -11.4 -3.31144 | CCAGCTTCTGGCCAA GCTGGGCG ATCG CGTCCAGC TTGTCGAAGTACGCG TERM 1156 1804032 - 1804056 + H 79 -12.1 -3.54741 | opp_overlap 1804032 CAGCGCGAAAAAAAA GCCTACGCGCG GGG TGCTCGTAGGC TTTCCAGGACTGCTC TERM 1157 1804056 - 1804032 - H 100 -11.4 -5.76949 | opp_overlap 1804032 CAGCGCGAAAAAAAA GCCTACGCGC GGGGT GCTCGTAGGC TTTCCAGGACTGCTC TERM 1158 1804712 - 1804700 - g 100 -3.3 -5.71638 | GAAGAAGGAAAAAAA GGCTC CAA GACCC AGCCGGAAACTGCAG Rmet_5251 1804683 - 1805003 + | host factor-I protein Rmet_5252 1805226 - 1806422 + | flagellin TERM 1159 1806444 - 1806462 + F 89 -11.7 -4.15044 | opp_overlap 1806443 1806439 1806444 CGCGTAAGCAGGAAG GCCGGAC CTCGT GTCCGGC TTTCTTGCGCCCGGA Rmet_5253 1806538 - 1806918 + | flagellar protein FlaG protein Rmet_5254 1806961 - 1808433 + | flagellar hook-associated 2-like protein Rmet_5255 1808458 - 1808892 + | flagellar protein FliS Rmet_5256 1808914 - 1809258 + | flagellar protein FliT TERM 1160 1809711 - 1809762 + G 70 -5.1 -4.37092 | opp_overlap 1809709, overlap 1809714 CACGGAAATGCAATC CGCGCCGCTGCTGG-CCACCAAGCT TGCC AGCCTGCTCGACCAG-AGCGGCATG TTTTATGAAGCGCAT Rmet_5257 1809358 - 1810701 + | hypothetical protein Rmet_5258 1810698 - 1810973 + | putative flagellar protein TERM 1161 1810971 - 1810993 + T 78 -13.4 -3.18264 | overlap 1810972 1810974 ACGGTCAGCCAGGGT TGATCCGGCG CAT CGCCGGATCC TTGCTGAATACGCCC TERM 1162 1810972 - 1810992 + T 83 -16.9 -2.50816 | overlap 1810971 1810974 CGGTCAGCCAGGGTT GATCCGGCG CAT CGCCGGATC CTTGCTGAATACGCC TERM 1163 1810974 - 1810990 + T 73 -13.7 -2.79098 | overlap 1810972 1810971 GTCAGCCAGGGTTGA TCCGGCG CAT CGCCGGA TCCTTGCTGAATACG TERM 1164 1811030 - 1811004 - T 80 -15.1 -3.01924 | GATCCTTGCTGAATA CGCCCGGCCAA TTGAT TAGGCCGGGCG ATCCTGATCGTCATC Rmet_5259 1811364 - 1811044 - | flagellar hook-basal body complex protein (FliE) TERM 1165 1811288 - 1811327 + g 84 -13.4 -3.73224 | gap 1, overlap 1811289 GCCGATGCCTCCTGG GGCGCGGCGCCGCCGCCGG CCA CCTGCG-CGGTGGCGCGCA TTTGCTGGAGCATGC TERM 1166 1811289 - 1811326 + g 84 -16.9 -2.8372 | gap 1, overlap 1811288 CCGATGCCTCCTGGG GCGCGGCGCCGCCGCCGG CCA CCTGCG-CGGTGGCGCGC ATTTGCTGGAGCATG Rmet_5260 1811468 - 1811737 + | hypothetical protein fliF 1811734 - 1813425 + | flagellar MS-ring protein fliG 1813412 - 1814425 + | flagellar motor switch protein G fliH 1814412 - 1815248 + | flagellar assembly protein H Rmet_5264 1815241 - 1816701 + | ATPase FliI/YscN TERM 1167 1817017 - 1816993 - g 71 -10 -3.57144 | gap 1 GGCCGGACGCGCAAA CTGGCAGCAGC AGAA GC-GCCGCCAG AACTCGTTCGATACG Rmet_5265 1816694 - 1817146 + | flagellar export FliJ TERM 1168 1818565 - 1818518 - g 74 -10.5 -3.75024 | gap 2 GGCCAGCAGCAACAA CGCCAACCGGGCAGCGGCAGCGC ATTC GCGCAG--GCCGCCGGGCTGACG CAGGATGCGCCAGTC Rmet_5266 1817162 - 1818649 + | flagellar hook-length control protein Rmet_5267 1818832 - 1819866 + | alpha/beta hydrolase fold Rmet_5268 1819924 - 1820595 + | DNA-N1-methyladenine dioxygenase Rmet_5269 1820629 - 1822221 + | sodium/sulphate symporter Rmet_5270 1822578 - 1822273 - | XRE family transcriptional regulator TERM 1169 1823038 - 1823070 + G 86 -9.8 -4.55295 | overlap 1823039 AGCGCGGCATCCTGC AGGCCGGTGGTTTC CCCGT GGAGCTACCGGCCA TTTCTTTGTCCGAGA TERM 1170 1823039 - 1823069 + G 77 -13.3 -3.32695 | overlap 1823038 GCGCGGCATCCTGCA GGCCGGTGGTTTC CCCGT GGAGCTACCGGCC ATTTCTTTGTCCGAG Rmet_5271 1822767 - 1824551 + | dihydroxy-acid dehydratase TERM 1171 1825254 - 1825234 - g 70 -2.4 -4.68593 | overlap 1825235 1825236 CCCACCACCGAAAAA GCGCGCGA GGATT TCGCGGTC TGGCGGAAGGAAAAC Rmet_5272 1824559 - 1825278 + | hypothetical protein Rmet_5273 1825358 - 1826326 + | hypothetical protein Rmet_5274 1826370 - 1827308 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_5275 1827416 - 1828249 + | intradiol ring-cleavage dioxygenase Rmet_5276 1828535 - 1830124 + | EAL-containing signal transduction protein TERM 1172 1830759 - 1830783 + G 80 -14.9 -3.15999 | CCAATGGATTGATCG CGCGGCCGGCG TGG CGCTGGCGGCG TTCGGTGTGTCGGAA Rmet_5277 1830199 - 1830816 + | lysine exporter protein LysE/YggA Rmet_5278 1831866 - 1830871 - | hypothetical protein Rmet_5279 1832893 - 1831967 - | LysR family transcriptional regulator Rmet_5280 1832956 - 1833591 + | hypothetical protein Rmet_5281 1833756 - 1834097 + | putative signal peptide protein TERM 1173 1834128 - 1834157 + T 100 -18.5 -4.0616 | opp_overlap 1834125 TGACGCCATGAACCC GCCCGGTGCCGCC GCAA GGCCGCGCCGGGC TTTCTGCTTCGGGTG Rmet_5282 1835265 - 1834261 - | dienelactone hydrolase TERM 1174 1834437 - 1834406 - G 79 -10.2 -4.1899 | opp_overlap 1834405 1834406 TCATCGTAGGTAAAA GGCTTGCTGGTC TGGGCGTT GACCAGCAACCC ATTCTCCAACTCCAT TERM 1175 1834824 - 1834802 - G 76 -6.2 -4.56597 | CCGCCTCGCGAAAAA CCCACGAGCA TGA TTCTCGTCGG GTCGATACGCGGGTG Rmet_5283 1835532 - 1836884 + | beta-lactamase Rmet_5284 1838450 - 1837047 - | ATP-dependent RNA helicase DbpA Rmet_5285 1838782 - 1839762 + | zinc-binding alcohol dehydrogenase Rmet_5286 1839833 - 1840900 + | hypothetical protein Rmet_5287 1841018 - 1842010 + | hypothetical protein TERM 1176 1842023 - 1842047 + F 80 -14.9 -3.08679 | TAGTGGATTGACGAC CGCCAGGCGCC CAC GGTGCCCGGCG TCTTGCGTCGACGGC TERM 1177 1842189 - 1842169 - f 76 -9.7 -4.0371 | CATCGCTCACACAAA GGGCGAG AGCCGTG CTCGCCC ATGGATAAACGCGCG TERM 1178 1842343 - 1842391 + G 73 -11.9 -3.35438 | gap 4, overlap 1842343 GAGACTTTTTGCCCT GG-C-CGC-CGCTTGCGCGTGTGGC GCG GCCA-ACGCGCAATCGAGCGTGACC TTGTACGGTGTGGTC Rmet_5288 1842320 - 1843480 + | porin TERM 1179 1843488 - 1843536 + F 83 -16 -3.08471 | gap 1 TGTTCTGAGCGTTCG GCCGGAAG-CGCCTTGATGCGAC TTGA GGCGACTCGAGGCGACTTCCGGC TTCACTGACGTTGTC TERM 1180 1844254 - 1844292 + G 81 -11 -4.0641 | opp_overlap 1844282 CCGTCGTGGCATTCC TTGCATCGCCAGTGAGTG TGG CGATCAATGGCGATGCCA TTTCTGTCGCTGGCG Rmet_5289 1843575 - 1844333 + | short-chain dehydrogenase/reductase SDR Rmet_5290 1845237 - 1844413 - | short-chain dehydrogenase/reductase SDR TERM 1181 1844549 - 1844493 - G 71 -9.2 -3.71552 | gap 1, overlap 1844490 ATGCCAGGAACAGAA TCGCATCGGCGACCTCTTCCGGG-GTG CCAA CGCGCCCGGCAGGGATCGTCGCAGCGA CGGAGGCAAGCCGAT Rmet_5291 1846156 - 1845221 - | hypothetical protein Rmet_5292 1846357 - 1847202 + | taurine catabolism dioxygenase TauD/TfdA Rmet_5293 1847230 - 1847799 + | hypothetical protein TERM 1182 1847802 - 1847842 + T 76 -15.3 -2.53263 | opp_overlap 1847794 1847805 1847809 TCAGCAACTCTGAGT CAACGCATCGCGGCGCTGG CAA CCAGCGCCGCGATTCACCG TCGATTCACCATCAG TERM 1183 1847839 - 1847805 - T 100 -22.2 -3.06831 | opp_overlap 1847802, overlap 1847794 1847809 GCAACTCTGAGTCAA CGCATCGCGGCGCTGG CAA CCAGCGCCGCGATTCA CCGTCGATTCACCAT TERM 1184 1847835 - 1847809 - T 100 -23.8 -2.54896 | opp_overlap 1847802, overlap 1847805 1847794 CTCTGAGTCAACGCA TCGCGGCGCTGG CAA CCAGCGCCGCGA TTCACCGTCGATTCA Rmet_5294 1848846 - 1847854 - | hypothetical protein TERM 1185 1850027 - 1850050 + G 71 -8 -4.07568 | overlap 1850028 AGCGATCGTCCATTG ACCGAGGTGG CGAC CCTCCTCGGC TTTTCCGCGCCGAGC Rmet_5295 1849133 - 1850176 + | AraC family transcriptional regulator TERM 1186 1850340 - 1850368 + T 100 -23.2 -3.16742 | opp_overlap 1850340, overlap 1850330 TCACCCATGAAAAAA CCCCGCGTGCGC TTCAC GCGCACGCGGGG TTCATCGGACTTCAG TERM 1187 1850368 - 1850340 - T 100 -23.2 -5.1675 | opp_overlap 1850340 1850330 TCACCCATGAAAAAA CCCCGCGTGCGC TTCAC GCGCACGCGGGG TTCATCGGACTTCAG Rmet_5296 1853012 - 1850421 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 1188 1853383 - 1853395 + H 78 -4.7 -4.84017 | AAACGGCCAAGCTGA GCGGG ATT CCCCC TTTTTATCGGCCCTT Rmet_5297 1853434 - 1853949 + | flagellar basal body-associated protein FliL TERM 1189 1854172 - 1854147 - g 74 -10.4 -3.72241 | GATGAACTACTGAAA GGCGTATCGG GCGAAT CCGATGCGCC CGTGGCAAGCGCGCC Rmet_5298 1854096 - 1855106 + | flagellar motor switch protein FliM Rmet_5299 1855099 - 1855569 + | flagellar motor switch FliN Rmet_5300 1855566 - 1856126 + | flagellar biosynthesis protein, FliO fliP 1856123 - 1856917 + | flagellar biosynthesis protein FliP fliQ 1856931 - 1857200 + | flagellar biosynthesis protein FliQ Rmet_5303 1857246 - 1858031 + | flagellar biosynthetic protein FliR Rmet_5304 1858267 - 1859796 + | metallophosphoesterase TERM 1190 1860201 - 1860213 + G 75 -9.1 -4.03234 | TATATGTGCGCTACG TGCCG CGC CGGCA TTTCTATCAGGACGA Rmet_5305 1859807 - 1861108 + | di-haem cytochrome c peroxidase Rmet_5306 1862775 - 1861078 - | methyl-accepting chemotaxis sensory transducer Rmet_5307 1863022 - 1864227 + | NnrS TERM 1191 1864379 - 1864408 + T 100 -13.6 -4.32951 | opp_overlap 1864379 GCTTCTACAGTCAAA GGGGGCGATCAA CAGTGC TCGATCGCCCCC TTTCTTCCTTCAGCT TERM 1192 1864408 - 1864379 - T 95 -15.8 -3.70902 | opp_overlap 1864379 GCTTCTACAGTCAAA GGGGGCGATCAA CAGTGC TCGATCGCCCCC TTTCTTCCTTCAGCT Rmet_5308 1864763 - 1864464 - | hypothetical protein Rmet_5309 1870158 - 1864924 - | ATP-binding region, ATPase-like protein TERM 1193 1865915 - 1865857 - G 70 -10.9 -3.35996 | overlap 1865860 CAGCGGCAGGCACAA CAGCGAGCGCAACCGCCG-CCCGGACGCG CCG CGCATCCGGATCGACGGC-GCATCGGCCG AGGCATCAGCCAGCG TERM 1194 1866865 - 1866833 - G 73 -9.2 -3.86194 | overlap 1866835 AAGCGCGTCGAGAAA GA-GGTCGCGTCATCG GCC CGCTG-CGCGACCGTC GATGCCGGGCCATCG TERM 1195 1866862 - 1866835 - G 75 -12 -3.51934 | gap 1, overlap 1866833 GCGCGTCGAGAAAGA GGTCGCGTCATCG GCC CGCTG-CGCGACC GTCGATGCCGGGCCA TERM 1196 1868402 - 1868391 - G 91 -7.2 -5.08824 | GCTGCACGCAAAAAA GCGG ATTG CCGC CGGTTCTGGCGTGGA Rmet_5310 1870894 - 1870208 - | two component LuxR family transcriptional regulator Rmet_5311 1871209 - 1871895 + | isochorismatase hydrolase Rmet_5312 1871953 - 1872774 + | alpha/beta hydrolase fold TERM 1197 1872819 - 1872842 + F 72 -10.9 -3.40843 | overlap 1872817 GCAACACATCGCCCC GACCGCCGC CATCGT GCGGCGGCC TCTTTGGAGCTTTTC TERM 1198 1874606 - 1874579 - g 72 -9 -4.06903 | overlap 1874581 AACCGCCAAAGCAAA GACGCTGGCGAT GAAC ACCGCCTGCGGC TGCGCGTCGTCATGC TERM 1199 1874604 - 1874581 - g 71 -10.2 -3.62354 | overlap 1874579 CCGCCAAAGCAAAGA CGCTGGCGAT GAAC ACCGCCTGCG GCTGCGCGTCGTCAT Rmet_5313 1872861 - 1874726 + | amidohydrolase 3 Rmet_5314 1874757 - 1875179 + | DoxX TERM 1200 1875851 - 1875871 + G 90 -16.1 -3.53012 | CGAGCACTTCTTCAG CGCGGCCCG CGC CGGGCTGCG TTTCACGCGGGCGCA Rmet_5315 1875198 - 1876817 + | protein of unknown function DUF894, DitE Rmet_5316 1876883 - 1877158 + | hypothetical protein Rmet_5317 1877249 - 1877581 + | response regulator receiver domain-containing protein Rmet_5318 1878333 - 1877590 - | two component LuxR family transcriptional regulator TERM 1201 1878362 - 1878309 - G 100 -21.8 -3.27525 | gap 1, opp_overlap 1878309 TCCCCTGAAATGCAA GCGGCCACG-CGATGCGTCCCGGCA TTCTG TCCCGGGACTCATCGACGTGGCCGT TGCGCGTCACAAGCT Rmet_5319 1881545 - 1878408 - | heavy metal efflux pump CzcA Rmet_5320 1882811 - 1881597 - | secretion protein HlyD TERM 1202 1883649 - 1883614 - g 74 -13.3 -3.18264 | GCCGCTATCGAGGAA GCTTCGTTGCGCGCC CAGATC GACGCGCAACAACGC ATCGTCGCCATCGAG Rmet_5321 1882981 - 1884537 + | RND efflux system, outer membrane lipoprotein, NodT Rmet_5322 1886116 - 1884527 - | periplasmic sensor signal transduction histidine kinase Rmet_5323 1886226 - 1886846 + | two component LuxR family transcriptional regulator Rmet_5324 1887165 - 1886854 - | putative signal peptide protein Rmet_5325 1887470 - 1888234 + | hypothetical protein Rmet_5326 1888283 - 1888948 + | two component transcriptional regulator TERM 1203 1889016 - 1889037 + G 71 -4.3 -4.56914 | overlap 1889001 GCTGGCGATCCTCGC GGTGGCGCT CATC GGCGGCATC TTTTCGTTTGCCTCC TERM 1204 1890246 - 1890273 + G 84 -17 -2.78935 | CGCGGCCGCGCGCCA CGGCACGCGCGT GACG GTGCGCGTGCCG TGTGGTGACAACTGT Rmet_5327 1888924 - 1890366 + | periplasmic sensor signal transduction histidine kinase Rmet_5328 1891886 - 1890351 - | RND efflux system, outer membrane lipoprotein, NodT Rmet_5329 1895005 - 1891886 - | heavy metal efflux pump CzcA TERM 1205 1894973 - 1894951 - G 80 -14.8 -3.04792 | CGACCATCGCGAACA CCAGCGCGAC GAT GCCGCGCCGG TTGAAGCACAGGGTA Rmet_5330 1896155 - 1894998 - | secretion protein HlyD Rmet_5331 1896333 - 1897010 + | two component transcriptional regulator Rmet_5332 1897012 - 1898427 + | periplasmic sensor signal transduction histidine kinase Rmet_5333 1899017 - 1898610 - | hypothetical protein TERM 1206 1898970 - 1899007 + g 71 -12.7 -2.91695 | overlap 1898967 CACGCACGTGCCGTG TCCCGCCACATGCCAGC CACG GCTGCCATGTGGCGTCA TGATTTCCACATCCG TERM 1207 1899174 - 1899194 + G 70 -6.1 -4.26076 | overlap 1899141 TGCGCACCAACGTGC TGGTCGC CGTGGGC GCGGCCA TTTTCGTCGACATGG Rmet_5334 1899029 - 1899751 + | MgtC/SapB transporter TERM 1208 1899770 - 1899751 - T 83 -16.4 -3.11272 | GAGCACCACGGAATA GCGGCGCC CGAA GGCGCCGC CAGAGTGAACCCCGC Rmet_5335 1900846 - 1899791 - | beta-lactamase-like protein TERM 1209 1900938 - 1900899 - H 76 -12.1 -3.30441 | opp_overlap 1900890 1900920, overlap 1900901 GACGATGCCGCAGAA CACGTGCCGGCGT-GCTGC ATCT GCGGCGACGCCGGCGCG-G CGTAACGGCTATCTT TERM 1210 1900937 - 1900901 - H 85 -15.8 -3.21924 | gap 1, opp_overlap 1900890 1900920, overlap 1900899 CGATGCCGCAGAACA CGTGCCGGCGT-GCTGC ATCT GCGGCGACGCCGGCGCG GCGTAACGGCTATCT Rmet_5336 1901038 - 1901523 + | hypothetical protein Rmet_5337 1902302 - 1901643 - | hypothetical protein TERM 1211 1901755 - 1901713 - G 70 -14 -2.55351 | opp_overlap 1901713 1901709, overlap 1901712 CCCGCCGACAGCAAC CGGTCGCTCGCAGCGCCAGC CAC GCCGTAGCTGCGATCCACCG TGTGGTTGATCACCT Rmet_5338 1902736 - 1902299 - | hypothetical protein TERM 1212 1902720 - 1902704 - G 91 -9.4 -4.82901 | GGCCGCCGACAAAAA CGCTGC CTTGC GCAGCG TGACCATGCTCATCA Rmet_5339 1903457 - 1902783 - | curli production assembly/transport component CsgG TERM 1213 1903503 - 1903490 - R 71 -9.5 -3.73953 | overlap 1903491 ACTACGTTGATGAAA GCGGC GACA GCCGC CGGTATGAAAACTCA Rmet_5340 1905282 - 1903516 - | TonB box-like protein TERM 1214 1905704 - 1905718 + r 77 -11.4 -3.68569 | CTACTGCATGCACGT CGCCTC CGT GAGGCG TTGTTGCATAAATCG Rmet_5341 1915546 - 1906532 - | adhesin TERM 1215 1915437 - 1915410 - G 81 -9.1 -4.27316 | gap 1, overlap 1915414 GCCGGCAATGCAAAA TGCACGGTGGCG GCGCG CGCCGCCG-GCA TTCCACTGCCGGTGT TERM 1216 1915594 - 1915576 - H 75 -8.1 -4.2649 | opp_overlap 1915593, overlap 1915572 1915570 CAACAAAACGACAAA CGGGGAC GTTTG ATCCCCG GACTAGGCTCCGTGC Rmet_5342 1915682 - 1915990 + | hypothetical protein Rmet_5343 1916315 - 1915968 - | hypothetical protein TERM 1217 1916825 - 1916860 + Gr 71 -6.9 -4.15881 | gap 1, overlap 1916826 1916851 1916855 CATCACATCTGGTTC TATCTGCACGACGGTG CGGAC CAC-GTCGTGCAGAGC TTCTTTGTCATGTTT Rmet_5345 1917761 - 1916934 - | transcription regulator XpsR transcription regulator protein Rmet_5344 1916411 - 1917004 + | hypothetical protein TERM 1218 1918551 - 1918527 - g 71 -7.8 -4.18018 | gap 1 GTTGCCGATGGAAAA CGCGCTGAGCC ATCT GGG-CAGCGCG CTGGGCGGATGCGAG Rmet_5346 1917970 - 1918881 + | hypothetical protein Rmet_5347 1919719 - 1918901 - | cytochrome c, class I Rmet_5348 1920763 - 1919768 - | hypothetical protein TERM 1219 1919873 - 1919831 - G 73 -9.1 -3.86202 | gap 1 GGCGACCACAGCAAA GCCCTGCTGCAGCCG-CTGA CCAC TCAGGCGGCTGGCGAAGAGC CTGCCGACGAGCATC TERM 1220 1920213 - 1920247 + g 75 -14.8 -2.70932 | GGCAGCATGGCGGTT GAGGCCGCAGTGGCCG CCG CGGCCGCCGAGGCCAC TGGTTGCGGCGCGCG TERM 1221 1920567 - 1920541 - G 71 -10 -3.65046 | overlap 1920520 GTGGCACGGCAAGAA TGGCGCCGCCAG CGC CGGTCAGCGCCA GGATCAGGCCCACGA Rmet_5349 1923371 - 1920846 - | sigma-54 factor, interaction region Rmet_5350 1923397 - 1924587 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1222 1924649 - 1924616 - f 73 -4.3 -4.72272 | overlap 1924618 TTCCTGTAGTAAAAA GGCGGGATCGTGCGC GTCC GCGCACGCCATCGAC CGATGCCATGGCAAC TERM 1223 1925649 - 1925692 + G 86 -10.3 -4.2349 | gap 2 GCTGGCCACGATGGT CGCCG-ATGCCGCGCCA-GCG GATC TGCGTGGCACTGCATTCGGCG TTTTCAATCTGGCCA Rmet_5351 1924657 - 1925871 + | major facilitator transporter TERM 1224 1925961 - 1925989 + F 83 -4.6 -5.0538 | gap 2 GGATTGTCACGACTC CGGCGT-CAA-CGG CGA CCGCTTGCGTGCCG TTTTTTCCGGTAAGC Rmet_5352 1926047 - 1926340 + | hypothetical protein TERM 1225 1926422 - 1926469 + F 93 -15.6 -3.4178 | gap 1, opp_overlap 1926414, overlap 1926423 CGAACCACGGGCTCT TGCGGAGAGCGCAAGCGAGAGGA AGG TCTCCGCGCTTGC-CTCTCCGCC TTGTCATCCGATCAT TERM 1226 1926423 - 1926468 + F 88 -19.1 -2.64747 | gap 1, opp_overlap 1926414, overlap 1926422 GAACCACGGGCTCTT GCGGAGAGCGCAAGCGAGAGGA AGG TCTCCGCGCTTGC-CTCTCCGC CTTGTCATCCGATCA Rmet_5353 1926656 - 1927309 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Rmet_5354 1927572 - 1928906 + | hypothetical protein Rmet_5355 1928919 - 1929824 + | hypothetical protein Rmet_5356 1930838 - 1929873 - | hypothetical protein Rmet_5357 1931089 - 1932240 + | acyl-CoA dehydrogenase-like protein Rmet_5358 1932237 - 1933277 + | acyl-CoA dehydrogenase-like protein Rmet_5359 1933274 - 1934245 + | hypothetical protein Rmet_5360 1935295 - 1934300 - | LysR family transcriptional regulator TERM 1227 1935605 - 1935573 - g 77 -12 -3.63073 | gap 1, opp_overlap 1935599 1935600, overlap 1935592 GACACGCTCGAACAA CTCGATGGCGACGAC GAAT GCCG-CGCCATCGTG CTGGCGGCCGAAGGC Rmet_5361 1935399 - 1936220 + | enoyl-CoA hydratase/isomerase Rmet_5362 1936227 - 1937438 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5363 1938666 - 1937545 - | NADH:flavin oxidoreductase/NADH oxidase dkgB 1939477 - 1938674 - | 2,5-diketo-D-gluconate reductase B Rmet_5365 1939587 - 1940489 + | LysR family transcriptional regulator Rmet_5366 1940814 - 1941980 + | major facilitator transporter Rmet_5367 1944178 - 1942031 - | CoA-binding TERM 1228 1942438 - 1942466 + g 70 -11.6 -3.35798 | opp_overlap 1942429, overlap 1942450 CCAGAATGCCGTCGA TGCGCGCGGCGG GCGCG CCACGGCGCGCA TTGTCCATCAGGCGT Rmet_5368 1945570 - 1944215 - | MmgE/PrpD TERM 1229 1944299 - 1944338 + g 74 -12.8 -3.28924 | opp_overlap 1944292 1944291 GAGCAAACGGGCGGC GTGCACGGAGCCGAGCGC GGGG GCGCTCAGTTCCATGAAC TTGTCGCCAAGCGTC TERM 1230 1944696 - 1944713 + g 77 -12.7 -3.30441 | TTGACCGCGGCGATA CGCGCTG GCGC CAGCGCG TTGTCACGCATGATG TERM 1231 1945463 - 1945426 - G 84 -14.1 -3.61398 | gap 1, overlap 1945427 GGTGCGCCGCAACAA GCTGGCGGCCGG-GTGCC ATC GGCACGCCGGCCATCAGG GCGGCAAACCAGTCG TERM 1232 1945462 - 1945427 - G 84 -17.6 -2.76696 | gap 1, overlap 1945426 GTGCGCCGCAACAAG CTGGCGGCCGG-GTGCC ATC GGCACGCCGGCCATCAG GGCGGCAAACCAGTC Rmet_5369 1945574 - 1946656 + | LysR family transcriptional regulator Rmet_5370 1946768 - 1947736 + | hypothetical protein TERM 1233 1947776 - 1947798 + T 81 -16.3 -2.84325 | opp_overlap 1947776, overlap 1947773 1947771 TTCCCGCAAGAAAAA GGGCCGGTC TCATC GACCGGCCC TGCTGTTTCCGCAAC TERM 1234 1947798 - 1947776 - T 100 -16.3 -5.06414 | opp_overlap 1947776 1947773 1947771 TTCCCGCAAGAAAAA GGGCCGGTC TCATC GACCGGCCC TGCTGTTTCCGCAAC Rmet_5371 1950032 - 1947852 - | catalase/peroxidase HPI Rmet_5372 1950255 - 1950743 + | YbaK/prolyl-tRNA synthetase associated region Rmet_5373 1951113 - 1953098 + | TonB-dependent receptor Rmet_5374 1953135 - 1954475 + | hypothetical protein TERM 1235 1955036 - 1955086 + G 78 -10.2 -3.95036 | gap 1 GCGGACTCCCCCGCC GACG-GCGAGGCCCTGCGCGCGC ACTGGC GCGCGCTCAAGGACACGCACGAC TTCTTTGCGATGCTT Rmet_5375 1954493 - 1955533 + | hemin-degrading TERM 1236 1956146 - 1956127 - g 80 -15 -3.14132 | opp_overlap 1956145 CCTGGGCGCGACCAA CGCGCTGG CCGG CCAGCGCG GCTTCAAGCCGTTCT Rmet_5376 1955552 - 1956403 + | periplasmic binding protein Rmet_5377 1956400 - 1957401 + | transport system permease protein Rmet_5378 1957421 - 1958206 + | hemin importer ATP-binding subunit Rmet_5379 1959063 - 1958254 - | short-chain dehydrogenase/reductase SDR Rmet_5380 1959845 - 1959060 - | citrate synthase TERM 1237 1959815 - 1959828 + g 73 -9.5 -3.84389 | GCGTGTGGGTGCACA GCCGG GTCA CCGGC TTGTCTTGTTGGCTC Rmet_5381 1961374 - 1959842 - | AMP-dependent synthetase and ligase Rmet_5382 1962389 - 1961394 - | hypothetical protein TERM 1238 1962556 - 1962540 - g 71 -9.4 -3.75629 | opp_overlap 1962535 1962540 CACTGCGAATCGAAA CGTCCG GCAGA CGGACG TTTCATCTTCGACCT TERM 1239 1962540 - 1962556 + G 73 -9.4 -3.92592 | opp_overlap 1962540, overlap 1962535 CACTGCGAATCGAAA CGTCCG GCAGA CGGACG TTTCATCTTCGACCT Rmet_5383 1962514 - 1963320 + | IclR family transcriptional regulator Rmet_5384 1963521 - 1963721 + | hypothetical protein Rmet_5385 1963718 - 1964296 + | hypothetical protein Rmet_5386 1964909 - 1964355 - | hypothetical protein TERM 1240 1965178 - 1965159 - g 71 -10.6 -3.56643 | opp_overlap 1965171 1965173 CGTACACGTTGGAAA GCGCTGGC CTGG GCCGGCGC CCTCAGCATAGTGGT TERM 1241 1965836 - 1965855 + G 72 -11.4 -3.48276 | CGACCGCTACATCGC CGCCGTCG ACCG CGATGGCG TTATCTCCACGGGGC Rmet_5387 1965102 - 1966424 + | hypothetical protein Rmet_5388 1967421 - 1966432 - | ApbE-like lipoprotein Rmet_5389 1969600 - 1967402 - | oxidoreductase FAD/NAD(P)-binding TERM 1242 1969232 - 1969211 - G 74 -13 -3.23692 | overlap 1969193 1969192 GACGAGCAGCATGAA TGCGGCCG TCACGC CGGCCGCA ATCCGGCCTGCGTCG TERM 1243 1969602 - 1969612 + r 78 -2.4 -5.04601 | AACTTGCGTAGCATC GGTG GAC CTCC TTTTTCCTTTATCGC Rmet_5390 1970116 - 1969649 - | hypothetical protein Rmet_5391 1970655 - 1970230 - | hypothetical protein TERM 1244 1970885 - 1970870 - g 70 -6 -4.24948 | opp_overlap 1970871, overlap 1970873 CGACCAGATCGAAAA GGACGG GCAT CCGACC GACTTCGTGGCCAAT Rmet_5392 1970805 - 1971464 + | two component transcriptional regulator TERM 1245 1971905 - 1971887 - g 75 -14.6 -2.7185 | ACGATCGCCGAACCA CTTGCCGC CCG GCGGCAAG CAAAAGTCGCGGCCG Rmet_5393 1971467 - 1972819 + | periplasmic sensor signal transduction histidine kinase Rmet_5394 1973048 - 1973623 + | hypothetical protein Rmet_5395 1975269 - 1973644 - | hypothetical protein TERM 1246 1974366 - 1974323 - G 95 -16.1 -4.20084 | opp_overlap 1974358, overlap 1974327 ATCACCGACTGAAAA GTCAGCACGGGAG-GCAGGCC CTCC AGCCCGCGCTCCCGCGC-GAC ACGCGCAATCTGGTC TERM 1247 1974363 - 1974327 - G 81 -16.6 -2.76404 | gap 1, opp_overlap 1974358, overlap 1974323 CCGACTGAAAAGTCA GCACGGGAG-GCAGGCC CTCC AGCCCGCGCTCCCGCGC GACACGCGCAATCTG Rmet_5396 1978050 - 1975288 - | ATPase, E1-E2 type TERM 1248 1976877 - 1976844 - G 85 -8.1 -4.60487 | gap 1, overlap 1976846 CATCATCCTCAAAAA GCTCG-GCGTCGTTGC ACA GCATCGACACGCGACC GATCAGCGCCAGCGG TERM 1249 1977877 - 1977859 - G 70 -8.1 -4.0492 | gap 1, opp_overlap 1977859 GAACTGGGAGACAAA GCGC-GCG ATGG CGCCGCGC TTCTTGCCCTGGGGC Rmet_5397 1979068 - 1978154 - | polyphosphate:AMP phosphotransferase TERM 1250 1979144 - 1979124 - H 100 -8.9 -5.5604 | CCAACGAACAAAAAA GCCCTGACG TTG CTCCAGGGC TCGATAGCCGCGACA TERM 1251 1979437 - 1979409 - H 87 -10.3 -4.37886 | overlap 1979411 CGACCGGCGATAAAA CGGTCAGGCTC CGCAGAC GAGCCTGACGG CGGCTAGCACTGGCC Rmet_5398 1979831 - 1980289 + | hypothetical protein Rmet_5399 1980289 - 1981791 + | YVTN beta-propeller repeat-containing protein TERM 1252 1982057 - 1982026 - g 70 -13.9 -2.57931 | gap 1, overlap 1982025 GCCATCCTGCATAAC CTTGCGATGACGGC CCTGC GCCGTCAT-GCAAG CGCGCAAGGGTTGCA Rmet_5400 1981867 - 1982364 + | sigma-24 (FecI-like) TERM 1253 1982601 - 1982626 + G 77 -11.1 -3.70722 | gap 1, overlap 1982599 1982611 1982621 GCTCGACGCGCCCGC GCCAGCCATCCG TGG CGGCTGGC-GGC TTCTGTCTTCGTCGC Rmet_5401 1982361 - 1983176 + | putative transmembrane transcriptional regulator (anti-sigma factor) TERM 1254 1984404 - 1984365 - g 72 -7.1 -4.25104 | gap 2, overlap 1984366 GCCCGCCGATGAAAA GGGCCAGGTC--GGCGCCG GTCT CGGCACCACGACCTCGGCC GGCACCGTCACGCTG Rmet_5402 1983643 - 1985625 + | beta-lactamase-like protein TERM 1255 1985665 - 1985635 - T 100 -24.1 -5.15969 | opp_overlap 1985635, overlap 1985656 CCGTAATGCAAAAAA GGCCCCGGCGCTT GCCTA AAGCGCCGGGGCC TTTTGCCGCGCGTTA TERM 1256 1985635 - 1985665 + T 100 -24.1 -4.08692 | opp_overlap 1985635 1985656 CCGTAATGCAAAAAA GGCCCCGGCGCTT GCCTA AAGCGCCGGGGCC TTTTGCCGCGCGTTA Rmet_5403 1987109 - 1985697 - | hypothetical protein Rmet_5404 1987659 - 1988192 + | hypothetical protein Rmet_5405 1988353 - 1989321 + | putative periplasmic protein Rmet_5406 1989333 - 1989860 + | hypothetical protein TERM 1257 1989945 - 1989991 + F 81 -13.6 -3.33815 | opp_overlap 1989939 GGAAACTGACGGCCG CATGAGCCGGTGCATGTCGCGG ATC CCGCGACATGCACCGCAAGACG TTCATTCGAGGCGCT TERM 1258 1990065 - 1990101 + F 95 -13.1 -4.17048 | gap 1, overlap 1990058 1990069 CGGGTAGCCCTTCCG GGACCCGGTCCGGGAA TCTGCC TTCCAGGACCGG-TCC TTCTTTTCCCCACAC TERM 1259 1990069 - 1990098 + F 76 -13.6 -3.10579 | overlap 1990058 1990065 TAGCCCTTCCGGGAC CCGGTCCGGGAA TCTGCC TTCCAGGACCGG TCCTTCTTTTCCCCA TERM 1260 1992261 - 1992237 - g 76 -13.6 -3.0701 | overlap 1992226 ACAACGGCCAGCTAA CCGTCACCGA TCACC TCGGCGACGG CATGACGTTCAGCGG TERM 1261 2000787 - 2000761 - g 71 -13.7 -2.70932 | gap 1, overlap 2000778 GCCCGGCGCGAAGGA CGCGGGCGGCGC ATCA ACGCCGCCCG-G CACGCGCATTGCCGG Rmet_5407 1990448 - 2001592 + | hypothetical protein TERM 1262 2002079 - 2002058 - g 81 -9.5 -4.28548 | gap 1 ACGGACCCAGCAAAA GGCCGATCAG GTG CTGAT-GGCC GAGGAGCGCCGTCGC TERM 1263 2002260 - 2002235 - g 86 -10.4 -4.28361 | GGAAGCCGACGAAAA GGGCCTGCTG CCGCGC CAGCAGGCGC TGGCCTATCAGCGCG Rmet_5408 2001579 - 2003099 + | outer membrane efflux protein Rmet_5409 2003096 - 2003917 + | hypothetical protein TERM 1264 2003996 - 2003981 - g 71 -10.4 -3.57144 | TTGCCGAGCTGGAAA GCCTGG CGCG CCAGGC GGATAGCGTGCAACA TERM 1265 2004982 - 2005029 + G 76 -14.1 -3.15544 | gap 1, overlap 2004984 ATGCTGATCCACCTG CCGG-TGGCCGATGCGCTCACG CTCGA CGTGGGCGCGCCGGTCAGCCTG TTCCTCACGGTGCGC TERM 1266 2004984 - 2005027 + G 80 -15.3 -3.14051 | gap 1, overlap 2004982 GCTGATCCACCTGCC GG-TGGCCGATGCGCTCACG CTCGA CGTGGGCGCGCCGGTCAGCC TGTTCCTCACGGTGC Rmet_5410 2003923 - 2005272 + | hypothetical protein TERM 1267 2006052 - 2006110 + G 90 -16.7 -3.35679 | CCGAACTGATCATTG GCG-GTCTGGCCACGCTGGGCTGGGCGCT GCT GGCGCCCGGCCCATTGC-GCCAGGCGTGC TTCTACCTGGCCACC TERM 1268 2006491 - 2006527 + G 74 -12.9 -3.25823 | gap 1, opp_overlap 2006511 GCTCCGCGTGTGGTT CCGGCGGCGGGCGGAG ACCACG CGCC-CGCGCCGCCGG TTGCTGTGGGGCGCG TERM 1269 2007244 - 2007287 + G 71 -9.5 -3.78934 | gap 2 TCTCGTCCAGATCGA CCTGGCCGCGCCGC-CG-CCA TCAC TGGTCGAGCTGCGCGGCAACG TTCTTCTGGCCGGCG Rmet_5411 2005274 - 2007373 + | peptidase M50 Rmet_5412 2008074 - 2007436 - | TetR family transcriptional regulator TERM 1270 2008201 - 2008212 + H 78 -4.4 -4.85782 | ACACTTCAAATTGTA CTGA CTGT TCAG TTTATTTTTAAGGGG Rmet_5413 2008279 - 2009712 + | aldehyde dehydrogenase Rmet_5414 2009738 - 2011342 + | glucose-methanol-choline oxidoreductase Rmet_5415 2011416 - 2013404 + | beta-lactamase-like protein Rmet_5416 2013852 - 2015591 + | sulfatase TERM 1271 2015609 - 2015652 + F 100 -23.2 -3.30124 | gap 1, opp_overlap 2015594 2015614, overlap 2015610 CCGGATAGCGTCTGA CACCACCGGCCGGC-TTCCGC CTC GCGGAACGCCGGCCGGTGGCA TTCTGGGCAGTCAGA TERM 1272 2015610 - 2015651 + F 100 -26.7 -2.57931 | gap 1, opp_overlap 2015594 2015614, overlap 2015609 CGGATAGCGTCTGAC ACCACCGGCCGGC-TTCCGC CTC GCGGAACGCCGGCCGGTGGC ATTCTGGGCAGTCAG TERM 1273 2015647 - 2015614 - f 100 -24.7 -2.62396 | gap 1, opp_overlap 2015610 2015609, overlap 2015594 TAGCGTCTGACACCA CCGGCCGGC-TTCCGC CTC GCGGAACGCCGGCCGG TGGCATTCTGGGCAG Rmet_5417 2015747 - 2016655 + | LysR family transcriptional regulator TERM 1274 2016785 - 2016761 - f 74 -11.4 -3.51242 | overlap 2016749 2016759 AAACCCATAAGAACA CGGGCAGCCA TTCAG CGACTGCCCG GACGGACCACCACGA TERM 1275 2017941 - 2017967 + G 72 -3.6 -4.59853 | GCGCCACCGGTATGT CGATCATGTACA GCG TGGGCGTGACCG TTTTTGGCGGCTTCG Rmet_5418 2016809 - 2018113 + | major facilitator transporter Rmet_5419 2018166 - 2019347 + | peptidase M20D, amidohydrolase Rmet_5420 2020209 - 2019337 - | hypothetical protein TERM 1276 2019424 - 2019394 - G 71 -12.4 -3.20382 | CGCCAGACTCAGCAA CACCGCCTCGAAGC CGC GCAACGTGGCGGTG ACCGGGCGGTCGACA Rmet_5421 2021021 - 2020206 - | NLPA lipoprotein Rmet_5422 2022072 - 2021014 - | hypothetical protein Rmet_5423 2024074 - 2022092 - | sulfatase Rmet_5424 2024447 - 2025361 + | LysR family transcriptional regulator Rmet_5425 2025710 - 2026864 + | acyl-CoA dehydrogenase-like protein Rmet_5426 2027372 - 2027623 + | hypothetical protein Rmet_5427 2027727 - 2027981 + | hypothetical protein Rmet_5428 2028425 - 2028051 - | hypothetical protein Rmet_5429 2028814 - 2028527 - | hypothetical protein TERM 1277 2029138 - 2029124 - g 72 -11.4 -3.54676 | opp_overlap 2029123 2029129, overlap 2029120 ATGCACCGAAATCAA CCTCCG CCG CGGAGG GTGCTGTCCACTCTC Rmet_5430 2029109 - 2030038 + | lipid A biosynthesis lauroyl acyltransferase Rmet_5431 2030950 - 2030108 - | enoyl-CoA hydratase TERM 1278 2031064 - 2031027 - R 93 -6.2 -5.58454 | gap 1, opp_overlap 2031027 2031026, overlap 2031028 CGCAGACCAAAAAAA TCCCGTCGGACACGCTC CACGC GTGCAC-TCCGACGGGG CTTTGGAAAACGTGT TERM 1279 2031063 - 2031028 - R 73 -9.7 -3.93988 | gap 1, opp_overlap 2031027 2031026, overlap 2031027 GCAGACCAAAAAAAT CCCGTCGGACACGCTC CACGC GTGCAC-TCCGACGGG GCTTTGGAAAACGTG Rmet_5432 2032267 - 2031089 - | acetyl-CoA acetyltransferase TERM 1280 2031260 - 2031316 + g 80 -13.7 -3.36289 | gap 3 GCCGTTGACGTTCAG GCGATCCGCGTCGG-CGCCCAGCGCCTG CAGC CAGGC-CAGGGGGACCGGCGCGAA-CGC TTCGTTGACCTCGTA Rmet_5433 2033126 - 2032344 - | short-chain dehydrogenase/reductase SDR Rmet_5434 2034180 - 2033209 - | 2-nitropropane dioxygenase, NPD Rmet_5435 2035370 - 2034258 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5436 2038231 - 2035517 - | ATP-dependent transcription regulator LuxR Rmet_5437 2039489 - 2038326 - | acyl-CoA dehydrogenase-like protein TERM 1281 2039083 - 2039099 + g 73 -13.7 -2.79183 | overlap 2039085 ATCCCGGCCAGATCG GAGCCGG CGC CCGGCTC TGTCATGGCAATCGC TERM 1282 2039137 - 2039157 + g 93 -18.3 -3.31461 | GTCTTGCCGCTGGCC GCGCCGGTG AGC CACCGGCGC TTCTGCGCCTCCGTG TERM 1283 2039824 - 2039801 - g 71 -13.2 -3.01924 | gap 1, opp_overlap 2039809 GACCGGGTTGCAAGA CTGGCCAGCGC CTT GCG-TGGCCAG GGCGTTGCTGCGGGC Rmet_5438 2039687 - 2041234 + | AMP-dependent synthetase and ligase TERM 1284 2041278 - 2041249 - T 72 -13.5 -2.56715 | gap 1, overlap 2041245 AGCGGTAGCAAGGCA GACGTGGCGCGGGC AAT GCCCGCGCCT-GCC CGATTCACGCCGTCG Rmet_5439 2042920 - 2041283 - | AMP-dependent synthetase and ligase TERM 1285 2042965 - 2042993 + r 74 -6.5 -4.35742 | GCTTGTCGGTGTGCT GCCAGGATGCGGC GGG GCCCGGGCCTGGC TTTTCGTCGTTGGCT Rmet_5440 2043606 - 2043091 - | hypothetical protein Rmet_5441 2044203 - 2043859 - | antibiotic biosynthesis monooxygenase Rmet_5442 2044762 - 2044172 - | glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like protein Rmet_5443 2046319 - 2044766 - | FAD linked oxidase-like protein Rmet_5444 2047995 - 2046316 - | FAD dependent oxidoreductase Rmet_5445 2049538 - 2048018 - | carbohydrate kinase, FGGY TERM 1286 2049515 - 2049530 + g 80 -4.7 -4.8083 | overlap 2049512 GCCTTCGTCGATCGC CAGGA TGACGT TCCTG TTTTTCATGGTGTTA Rmet_5446 2050997 - 2049543 - | major facilitator transporter TERM 1287 2051052 - 2051074 + r 90 -15 -3.53722 | opp_overlap 2051039 2051054 2051056 AACTGCACGCGCTAA GAGACCATCT TAC AGATGGTCTC TTATCTGAATCTGCC Rmet_5447 2051450 - 2051061 - | hypothetical protein TERM 1288 2051147 - 2051133 - G 72 -8.5 -4.14392 | opp_overlap 2051124 TGTCAACCGGGAAAA CCCGG TTGTG CCGGG ACGATTCGCTACAAG Rmet_5448 2051747 - 2051457 - | hypothetical protein TERM 1289 2052154 - 2052134 - g 75 -9.7 -4.06533 | opp_overlap 2052147, overlap 2052145 CAAATGAGCAAAGAA GACGACAAC AAG GCCGTCGTC GGCCGGTGGTTCACC TERM 1290 2052158 - 2052145 - g 73 -9.5 -3.89893 | opp_overlap 2052147 2052156 2052157, overlap 2052134 AGAAGACGACAACAA GGCCG TCGT CGGCC GGTGGTTCACCGAAT Rmet_5449 2052122 - 2052589 + | hypothetical protein TERM 1291 2052647 - 2052601 - f 91 -13.7 -3.80573 | overlap 2052609 TTGATGAGTACTAAA TGAGGCAAGTTGTTCCGCGCC TTTCT GGCGCGGAACAACGCTCCCGA TCGGCACAAGTAGGC TERM 1292 2052639 - 2052609 - f 100 -21.3 -3.17054 | overlap 2052601 TACTAAATGAGGCAA GTTGTTCCGCGCC TTTCT GGCGCGGAACAAC GCTCCCGATCGGCAC TERM 1293 2052683 - 2052657 - f 86 -15.2 -3.31144 | opp_overlap 2052657 TCCCGATCGGCACAA GTAGGCCTGCAA TTC TTGCGGGCCTAC TTCATCTACGAGCAC TERM 1294 2052657 - 2052683 + F 89 -17.4 -3.25823 | opp_overlap 2052657 TCCCGATCGGCACAA GTAGGCCTGCAA TTC TTGCGGGCCTAC TTCATCTACGAGCAC TERM 1295 2052690 - 2052701 + F 81 -4.4 -4.87133 | CGGGCCTACTTCATC TACG AGCA CGTA TTTTCTTTACGCGAT TERM 1296 2052811 - 2052838 + F 71 -6.9 -4.15396 | opp_overlap 2052814, overlap 2052798 2052813 2052814 CGGGCGGCATTCCAT CAACGCCAGCC TCTCAT GGCTGGCGCTC TTGTTTGCTTTACCC TERM 1297 2052835 - 2052814 - f 74 -13 -3.16564 | opp_overlap 2052798 2052814 2052813 2052811 GCGGCATTCCATCAA CGCCAGCC TCTCAT GGCTGGCG CTCTTGTTTGCTTTA Rmet_5450 2052839 - 2053129 + | hypothetical protein Rmet_5451 2053126 - 2053773 + | hypothetical protein Rmet_5452 2054704 - 2053811 - | integrase catalytic subunit Rmet_5453 2054997 - 2054701 - | transposase IS3/IS911 Rmet_5454 2055571 - 2055056 - | transposon Tn7 transposition protein TnsC Rmet_5455 2056419 - 2055568 - | integrase catalytic subunit Rmet_5456 2056709 - 2056437 - | transposase IS3/IS911 Rmet_5457 2057537 - 2056734 - | Tn7-like transposition protein C TERM 1298 2057546 - 2057566 + r 71 -6.1 -4.37506 | overlap 2057562 TTTTCATCTTTGTCT CCTTTCAGG TCA TCTGGAGGG TTTCTCTTTGCTGCT Rmet_5458 2059698 - 2057521 - | hypothetical protein Rmet_5459 2060651 - 2059698 - | hypothetical protein TERM 1299 2059837 - 2059823 - G 71 -9.2 -3.76125 | overlap 2059824 CCATGGGAAGGCAAA GCGCGA GGT CCGCGC GGAAGGCCAGCTCCC Rmet_5460 2061737 - 2061000 - | hypothetical protein TERM 1300 2061778 - 2061805 + G 76 -9.2 -4.08767 | CTACGCGCACTGCAC GAGGAGTGCTTG CGCG CAAGGACTTCTC TTTTGCCCAACTAGC TERM 1301 2062105 - 2062136 + G 75 -4.4 -4.66833 | gap 1, opp_overlap 2062096, overlap 2062106 2062108 AAAAGGTCGAAGCGC AGCTCGCGAATGGAG AGC TTCCATTCACG-GCG TTTTTGCAATTGGCG Rmet_5461 2061759 - 2062253 + | hypothetical protein Rmet_5462 2062839 - 2062489 - | hypothetical protein Rmet_5463 2063359 - 2063138 - | hypothetical protein Rmet_5464 2063375 - 2063686 + | hypothetical protein TERM 1302 2063797 - 2063778 - T 100 -12.8 -5.15969 | GCGGAAGCGAAAAAA GCGAGCGC TCAA GCGCCCGC CGTAGATGTTGCTCA Rmet_5465 2064327 - 2063836 - | hypothetical protein Rmet_5466 2064784 - 2064467 - | hypothetical protein TERM 1303 2064788 - 2064763 - G 79 -6.9 -4.56597 | gap 1 GCCTGCTGCCAAAAA GCCCTT-TTGCC ACC GGCAACAAGTGC TGGGTATGGGCCGTT Rmet_5467 2066038 - 2064878 - | hypothetical protein TERM 1304 2065450 - 2065438 - G 73 -6.3 -4.4078 | overlap 2065434 ACAAGAATGAAGAAA TCTCT GAC AGAGA GATCTCGCGGTGTGA Rmet_5468 2066469 - 2066023 - | hypothetical protein Rmet_5469 2067267 - 2066578 - | hypothetical protein TERM 1305 2068189 - 2068219 + r 72 -13.3 -2.52516 | gap 1, overlap 2068188 CCCTACGACTTGGGC GGCACGGCGCTGCG TGAT TG-GGCGCCGTGCC CTTGCTGCTACCGCA Rmet_5470 2069085 - 2068357 - | GntR family transcriptional regulator TERM 1306 2069167 - 2069141 - R 79 -8.7 -4.1891 | gap 1, opp_overlap 2069154, overlap 2069142 CCGGCTCAATATAAA GGAAG-CCGGGC GGGC GCCCGGGCTTCG ACAGGCGCTATCGTA TERM 1307 2069166 - 2069142 - R 72 -12.2 -3.11024 | gap 1, opp_overlap 2069154, overlap 2069141 CGGCTCAATATAAAG GAAG-CCGGGC GGGC GCCCGGGCTTC GACAGGCGCTATCGT Rmet_5471 2069761 - 2069198 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Rmet_5472 2070617 - 2069775 - | fumarate hydratase Rmet_5473 2071792 - 2070623 - | mandelate racemase/muconate lactonizing enzyme Rmet_5474 2072786 - 2071803 - | hypothetical protein TERM 1308 2073020 - 2073047 + H 79 -7.6 -4.46233 | gap 1, opp_overlap 2072997, overlap 2073021 CCCCCGGATAGCTAT CCCAGCCCGCGGG CAC CCCGCAG-CTGGC TTTCTTTCGGCTTGA Rmet_5475 2073381 - 2073704 + | hypothetical protein TERM 1309 2073889 - 2073918 + G 71 -13.7 -2.69151 | opp_overlap 2073894, overlap 2073887 2073886 2073875 2073891 TCGTTCAAGTTGCCA TAGCAGTCGCCAT GTTT GTGGTGACTGCTA TGCTCTCTCGCGCGA Rmet_5476 2073846 - 2074091 + | hypothetical protein Rmet_5477 2074275 - 2074772 + | hypothetical protein TERM 1310 2074905 - 2074883 - T 90 -19.2 -3.07816 | opp_overlap 2074883 2074886, overlap 2074886 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 1311 2074883 - 2074905 + T 91 -19.2 -3.18264 | opp_overlap 2074883 2074886, overlap 2074886 GCGGCACTGATGTAA CAAGGGGCCC GGC GGGCCCCTTG TTACTGGATCAGAAG TERM 1312 2074886 - 2074902 + T 93 -15.1 -3.73647 | opp_overlap 2074883 2074886, overlap 2074883 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG TERM 1313 2074902 - 2074886 - T 90 -15.1 -3.68569 | opp_overlap 2074886 2074883, overlap 2074883 GCACTGATGTAACAA GGGGCCC GGC GGGCCCC TTGTTACTGGATCAG Rmet_5478 2075129 - 2074914 - | hypothetical protein Rmet_5479 2076016 - 2075183 - | ATPase Rmet_5480 2077452 - 2076013 - | integrase catalytic subunit Rmet_5481 2078133 - 2077564 - | hypothetical protein Rmet_5482 2078196 - 2078618 + | hypothetical protein TERM 1314 2078855 - 2078867 + F 76 -9.1 -4.14243 | opp_overlap 2078847 TCCAATATCCCAGCT TCGGC TGG GCCGA TTTTGAAATGGCCTG Rmet_5483 2078870 - 2079667 + | DNA adenine methylase Dam TERM 1315 2079773 - 2079819 + G 78 -10.2 -3.96148 | gap 1, opp_overlap 2079788, overlap 2079774 AATGCCAACCCCCGC CCCAAGCTCC-CCAAAGCCGC AATGGC GCGGCTTTCGTGGAGGTTGGA TTTATGGTCAAAGAC TERM 1316 2079774 - 2079818 + G 75 -13.7 -2.97475 | gap 1, opp_overlap 2079788, overlap 2079773 ATGCCAACCCCCGCC CCAAGCTCC-CCAAAGCCGC AATGGC GCGGCTTTCGTGGAGGTTGG ATTTATGGTCAAAGA Rmet_5484 2079754 - 2080161 + | hypothetical protein TERM 1317 2080167 - 2080187 + T 83 -15.4 -3.07344 | opp_overlap 2080165 GACGCTGTAACCACC GGGCCCGC TGCCT GCGGGCCC TCTGTTGCAAGCTCG TERM 1318 2080227 - 2080207 - T 71 -7.5 -4.14392 | opp_overlap 2080225, overlap 2080208 TTGCAAGCTCGAAAA TCGCAACCC TTC GGGTTACGG GAGCATGCCTCGCGT Rmet_5485 2080518 - 2080222 - | hypothetical protein Rmet_5486 2081706 - 2080801 - | hypothetical protein TERM 1319 2080871 - 2080890 + g 83 -15 -3.28924 | opp_overlap 2080882 CCGCGGGTAGCGTCA GCGGCAGC CAAT GCTGCCGC TTGTGCCAACGACTG Rmet_5487 2083648 - 2081873 - | superfamily I DNA/RNA helicase-like protein Rmet_5488 2085437 - 2083641 - | putative exonuclease TERM 1320 2084119 - 2084109 - G 72 -6.8 -4.23892 | CGTAATGATGGAAAA TGGG ATG CCCA ACGCCGTGAGGAACT Rmet_5489 2086242 - 2086475 + | hypothetical protein TERM 1321 2087371 - 2087387 + T 81 -4.4 -4.94058 | gap 1 ACGCCTATCAGGGGC TCCG-GC TTTG GCACGGA TTTTGTTTCCCTTGC Rmet_5490 2088711 - 2087533 - | 4-hydroxybenzoate 3-monooxygenase Rmet_5491 2089080 - 2090045 + | hypothetical protein TERM 1322 2090682 - 2090706 + G 81 -15.8 -3.03124 | opp_overlap 2090652 2090682 GCGCGGTGCAGGTAA CGAGCGGCAA CGCGC TTGCCGCTCG TCTTGCCAAATCGGC TERM 1323 2090706 - 2090682 - g 82 -15.8 -3.05384 | opp_overlap 2090682, overlap 2090652 GCGCGGTGCAGGTAA CGAGCGGCAA CGCGC TTGCCGCTCG TCTTGCCAAATCGGC Rmet_5492 2090060 - 2091763 + | putative succinate dehydrogenase Rmet_5493 2091760 - 2092107 + | NIPSNAP domain-containing protein Rmet_5494 2092203 - 2093192 + | hypothetical protein Rmet_5495 2094141 - 2093344 - | zinc-binding alcohol dehydrogenase Rmet_5496 2094179 - 2094451 + | transposase IS3/IS911 Rmet_5497 2094469 - 2095320 + | integrase catalytic subunit Rmet_5498 2095570 - 2095325 - | oxidoreductase, zinc-binding Rmet_5499 2095745 - 2096920 + | acetyl-CoA acetyltransferase Rmet_5500 2096924 - 2097322 + | hypothetical protein Rmet_5501 2097334 - 2098128 + | enoyl-CoA hydratase Rmet_5502 2098131 - 2098946 + | short chain dehydrogenase Rmet_5503 2099156 - 2100124 + | hypothetical protein TERM 1324 2100129 - 2100103 - T 70 -5.1 -4.45544 | overlap 2100106 GGCCATCAAGGAAAA CAGCGCGATTC GGGTG GAATAGCGATG AGCAAATGCGCTCAC TERM 1325 2100174 - 2100136 - T 91 -13.3 -3.80014 | ATAGCGATGAGCAAA TGCGC-TCACGGAAGCACA CTA TG-GCATCCGTGATGCGCA TCTACGTGACCCGCA TERM 1326 2100238 - 2100222 - T 100 -10.8 -5.9003 | AAACGAACAAAAAAA GGCGCC GCAAG GGCGCC AAAAGCATGAATGCG Rmet_5504 2101402 - 2100263 - | porin TERM 1327 2102285 - 2102306 + G 80 -5.1 -4.83615 | opp_overlap 2102298 CTGTAAGTGCTATCG TCGTTGCTG GAAA CGGCAAGGA TTTTTGTGCCGGCTA TERM 1328 2102384 - 2102399 + G 72 -9 -4.11692 | AAGCGAGCCCTTATC GAACCG GAAT CGGTTC TTTTGACGATGACTC Rmet_5505 2102113 - 2102994 + | enoyl-CoA hydratase Rmet_5506 2103667 - 2103113 - | hypothetical protein TERM 1329 2103726 - 2103739 + r 83 -4.5 -5.04385 | overlap 2103723 TTCGTCCCCCATGCT GGGCT AGAC AGCTC TTTTTTCAAGCTCTC Rmet_5507 2104886 - 2103729 - | acyl-CoA dehydrogenase-like protein TERM 1330 2104255 - 2104245 - G 91 -6.8 -5.04385 | opp_overlap 2104245 CACATCGTCAAAAAA CAGC TCT GCTG TGTCCTGCGAATGAA Rmet_5508 2106931 - 2104904 - | AMP-dependent synthetase and ligase TERM 1331 2107232 - 2107248 + G 70 -2.1 -4.62783 | opp_overlap 2107224 CATTACAGCACCAGG CGGTACG CAC CCTTCCG TTTTTCAGGTGCATG Rmet_5509 2107020 - 2107595 + | short-chain dehydrogenase/reductase SDR TERM 1332 2108470 - 2108445 - g 80 -8.2 -4.34402 | opp_overlap 2108467, overlap 2108447 CGGGTCAGAGCAAAA GGGGCGCGAG TTGGGC CTCACGCCAC GAGCGCGCGTGGTTT Rmet_5510 2107627 - 2108835 + | thiolase TERM 1333 2109104 - 2109080 - g 75 -4.1 -4.64334 | AACGCCTGAACAAAA GGAGGAACTCT TCA AGCGTGCCACC GAGCTGAAGGCAGCG TERM 1334 2109205 - 2109217 + G 75 -3.3 -4.74103 | TCGAACTTTGCCTCG CCTGC CAC GCACG TTTTTCACTTGCCAG Rmet_5511 2108844 - 2110988 + | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase TERM 1335 2111260 - 2111236 - g 73 -9.1 -3.84266 | opp_overlap 2111234 2111255 AGACCTGACATGAAA GGGCCGGATGC AGA GCGCCGGGCCC GACTTATCGGCCCCT Rmet_5512 2111002 - 2111862 + | enoyl-CoA hydratase/isomerase TERM 1336 2112026 - 2112036 + G 70 -2.4 -4.5954 | GGACGCGTTGTTGCG GCAC CAT GGGC TTTTGTCTGCTCTAG Rmet_5513 2111901 - 2112947 + | AraC family transcriptional regulator Rmet_5514 2113738 - 2112944 - | short-chain dehydrogenase/reductase SDR TERM 1337 2113488 - 2113512 + g 73 -5.6 -4.3739 | overlap 2113490 CTATTGACCAGGCCA TCGAGCCGGC CAGAC GCCGACTCAA TTTTCTGCACGACTG Rmet_5515 2115214 - 2113775 - | aldehyde dehydrogenase Rmet_5516 2116500 - 2115211 - | cytochrome P450 Rmet_5517 2117525 - 2116530 - | ferredoxin TERM 1338 2117177 - 2117162 - G 72 -8.2 -4.07568 | TTCCGCCGGCGAAAA GCAGGC TACG GCCCGC GCTCTGGACCAACTC TERM 1339 2117602 - 2117620 + r 71 -8.8 -3.72695 | opp_overlap 2117601 2117598 2117612 CGTGCAGGAAACGAC GATGACCG AAT CGGTCAAC TTTGCTGGCCGAAAT TERM 1340 2117864 - 2117845 - R 100 -12.8 -6.10489 | AAGTCGAAAAAAAAA GCGGCGCC ATTC AGCGCCGC CGTAAGCCAGCAGGA Rmet_5518 2118892 - 2117960 - | electron transfer flavoprotein, alpha subunit Rmet_5519 2119660 - 2118911 - | electron transfer flavoprotein beta-subunit Rmet_5520 2120608 - 2119733 - | MaoC-like dehydratase TERM 1341 2120573 - 2120589 + g 83 -2.1 -5.1861 | GTGGATCACGTCACC CGACTGC CAG GCCTTCG TTTTTTGATAGTCAA Rmet_5521 2121422 - 2120601 - | enoyl-CoA hydratase/isomerase Rmet_5522 2122456 - 2121419 - | hypothetical protein Rmet_5523 2123561 - 2122497 - | aminoglycoside phosphotransferase TERM 1342 2122865 - 2122840 - G 71 -7.5 -4.18494 | CAGTGGTAGGCAAAA TCGACCATCGG ATCA CCGAGGGTGGA CAGTTCCCAGTCGAG Rmet_5524 2124337 - 2123564 - | short-chain dehydrogenase/reductase SDR Rmet_5525 2124495 - 2125631 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1343 2125648 - 2125675 + T 73 -13.4 -2.71364 | opp_overlap 2125645 2125641 CGTCATAAGGGACGA GGCGCACGGCAG GCAA CTGCTGTACGCC TCCTTGGGGAACTCA Rmet_5526 2126053 - 2125688 - | hypothetical protein Rmet_5527 2127005 - 2126070 - | aminoglycoside phosphotransferase Rmet_5528 2128606 - 2127077 - | acyl-CoA synthetase Rmet_5529 2129781 - 2128642 - | acyl-CoA dehydrogenase-like protein Rmet_5530 2130951 - 2129791 - | acyl-CoA dehydrogenase-like protein TERM 1344 2130562 - 2130539 - G 70 -11 -3.33696 | overlap 2130543 GCGGTCCGCAAGGAA GCCAGATCCG AGCC CGAACCTGGC TCGGAAAAGCCTTGG TERM 1345 2131217 - 2131178 - g 74 -2.7 -4.72007 | gap 1, overlap 2131197 GCCTACGAAAACAAA GCCTGCCGTAC-CTGACC AACAA GACCCGAGTCCTGCAGGC CCTATATTTAGGCGG Rmet_5531 2131041 - 2131952 + | GntR family transcriptional regulator Rmet_5532 2131973 - 2132776 + | GntR family transcriptional regulator Rmet_5533 2133469 - 2132777 - | nitroreductase Rmet_5534 2134492 - 2133521 - | 2-nitropropane dioxygenase, NPD Rmet_5535 2135708 - 2134587 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5536 2135915 - 2136493 + | hypothetical protein Rmet_5537 2136499 - 2136972 + | MaoC-like dehydratase TERM 1346 2137012 - 2137053 + T 71 -7.9 -4.08767 | opp_overlap 2137018 2137019 2137021, overlap 2137019 TCAGCCACACGGAGG GGAAAAGGAGGGGGCGAAC TGTT GTTCGCCCCACTCTTTCCA TTTTGAACGGCTCGA TERM 1347 2137048 - 2137018 - T 89 -11.9 -4.15006 | gap 1, opp_overlap 2137012 2137019, overlap 2137019 2137021 ACACGGAGGGGAAAA GGAG-GGGGCGAAC TGTT GTTCGCCCCACTCT TTCCATTTTGAACGG TERM 1348 2137019 - 2137047 + T 95 -15.4 -3.92659 | gap 1, opp_overlap 2137018 2137019 2137021, overlap 2137012 CACGGAGGGGAAAAG GAG-GGGGCGAAC TGTT GTTCGCCCCACTC TTTCCATTTTGAACG TERM 1349 2137047 - 2137019 - T 83 -15.4 -3.08522 | gap 1, opp_overlap 2137019 2137012, overlap 2137018 2137021 CACGGAGGGGAAAAG GAG-GGGGCGAAC TGTT GTTCGCCCCACTC TTTCCATTTTGAACG TERM 1350 2137044 - 2137021 - T 72 -12.4 -3.09831 | opp_overlap 2137019 2137012, overlap 2137019 2137018 CGGAGGGGAAAAGGA GGGGGCGAAC TGTT GTTCGCCCCA CTCTTTCCATTTTGA TERM 1351 2137129 - 2137112 - T 100 -14.1 -5.63517 | CGGGCAAAGAAAAAA GGGGCGC TTCC GCGCCCC CAACTACCCGAGTCT Rmet_5538 2138303 - 2137149 - | acyl-CoA dehydrogenase-like protein Rmet_5539 2138827 - 2138402 - | hypothetical protein Rmet_5540 2139918 - 2138824 - | thiolase family protein Rmet_5541 2140888 - 2140031 - | integrase catalytic subunit Rmet_5542 2141280 - 2140942 - | transposase IS3/IS911 TERM 1352 2140999 - 2140985 - G 82 -4.2 -5.00616 | GCCTGCGCGAAAAAA GCGC TGGCAGT GCGC AGGATGTCGTTGGCG Rmet_5543 2142630 - 2141365 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1353 2143057 - 2143014 - R 72 -12.5 -3.10597 | overlap 2143018 CCGGCCATCGAAAAG GAAACCGCCCAATGCCAAG TAACAT CCTGACGTTGGACGGCTTC AGAGAATTGCTATTT TERM 1354 2143053 - 2143018 - R 79 -9.7 -4.21922 | overlap 2143014 CCATCGAAAAGGAAA CCGCCCAATGCCAAG TAACAT CCTGACGTTGGACGG CTTCAGAGAATTGCT Rmet_5544 2144527 - 2143067 - | aldehyde dehydrogenase Rmet_5545 2145602 - 2144544 - | alcohol dehydrogenase GroES-like protein TERM 1355 2144814 - 2144783 - G 86 -9.3 -4.56597 | TGGCGCCCCCAAAAA GGCCCACGACGAC GACGGT GCCTCCGCGGGCC ACACTCTCCAGCGCC TERM 1356 2145342 - 2145325 - G 70 -11.3 -3.32202 | opp_overlap 2145328, overlap 2145328 CACGGGTAGACAACA CAAGGCG TCCC CGCCTTG ACTGACGCCTCACTG Rmet_5546 2146659 - 2145616 - | Rieske (2Fe-2S) region TERM 1357 2146220 - 2146193 - G 75 -9.2 -3.95219 | overlap 2146216 CCCAAATGCGAGAAA TCCAGCAGATTG TCAA CAATCAACTGGA CGCCCGAGGCATAAC TERM 1358 2146699 - 2146709 + r 81 -8.2 -4.65916 | overlap 2146683 2146678 GCAGCAGATTCGGCT GCGC TTT GCGC TTTTGTTGAGGTCCA Rmet_5547 2147610 - 2146780 - | LuxR family transcriptional regulator Rmet_5548 2148097 - 2149416 + | Rieske (2Fe-2S) region Rmet_5549 2149432 - 2150397 + | ferredoxin Rmet_5550 2150439 - 2151161 + | GntR family transcriptional regulator TERM 1359 2151232 - 2151252 + G 93 -3.2 -5.44119 | gap 1, overlap 2151230 2151229 GGTCTTTGAACCTGC GTGCGATGC TCTC GC-TCGCCC TTTTTTTGGCATCGC Rmet_5551 2151207 - 2152175 + | hypothetical protein Rmet_5552 2152190 - 2153479 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5553 2153506 - 2154657 + | hypothetical protein Rmet_5554 2154654 - 2155127 + | hypothetical protein TERM 1360 2155332 - 2155303 - g 89 -15.1 -3.78775 | GTGGCTACCAGGAAA TCGCCATGGCC TCCAAGCC GGCCATGGCGA CAGCACCGCTGCAGG Rmet_5555 2155187 - 2156854 + | putative FAD-binding dehydrogenase Rmet_5556 2156859 - 2157968 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5557 2158007 - 2158801 + | short chain enoyl-CoA hydratase Rmet_5558 2159490 - 2159068 - | histone-like DNA-binding protein TERM 1361 2159794 - 2159839 + H 72 -12.6 -3.0263 | gap 2, opp_overlap 2159821, overlap 2159799 AGATCTCCCCTACCT TGGCCATCGGCGCCGGCCGGCT TAAT AGCCCGCCGGCGCTGCT--CCA TGTTCCGGACCTGAT TERM 1362 2161496 - 2161472 - g 81 -3 -5.06816 | overlap 2161473 ATTGTGTAACAAAAA GGATTC-TGGAT CTC ATCCACGAA-CC AAACGAAATCGTAAA Rmet_5559 2160214 - 2162616 + | hypothetical protein Rmet_5560 2162721 - 2163692 + | hypothetical protein Rmet_5561 2167968 - 2163928 - | XRE family transcriptional regulator TERM 1363 2167400 - 2167386 - G 74 -2.1 -4.82901 | GTGGCGTCACAAAAA CAAAC GTCGT GTCTG CAGGGTCGTAGCCAA Rmet_5562 2168482 - 2168168 - | H-NS family DNA-binding protein TERM 1364 2168969 - 2168989 + G 75 -4.5 -4.61868 | ACGTCTTCGAAGTGC CCGGCCACG AGC TGCCGCCGG TTTTCTATCTGGGTG TERM 1365 2169043 - 2169027 - g 86 -2.9 -5.18866 | overlap 2169031 CTCAAACAAACAAAA GCAGGTC GCC AAACTGC TTCAGCTCCGGGACG Rmet_5563 2168617 - 2170995 + | hypothetical protein TERM 1366 2171158 - 2171136 - T 100 -12.7 -5.02476 | opp_overlap 2171157, overlap 2171125 2171124 2171122 ACACCGCGCAAAAAA TGCGCGACC ACGAA GGCCGCGCA CTTGAGAGCTCTTAA Rmet_5564 2171706 - 2171170 - | hypothetical protein Rmet_5565 2172041 - 2172340 + | hypothetical protein Rmet_5566 2173666 - 2172992 - | hypothetical protein Rmet_5567 2174272 - 2173673 - | hypothetical protein Rmet_5568 2175209 - 2174559 - | hypothetical protein Rmet_5569 2176137 - 2176844 + | ArsR family transcriptional regulator Rmet_5570 2176835 - 2177341 + | hypothetical protein TERM 1367 2177356 - 2177384 + T 74 -11.8 -3.52073 | overlap 2177357 ACGCTCAGTCGAGGG TGATGACGGTGG GCTCG CCATCGTCATCG TTCTGATCTTCCGCG Rmet_5571 2178343 - 2177345 - | LysR family transcriptional regulator Rmet_5572 2179644 - 2178697 - | Dyp-type peroxidase Rmet_5573 2180760 - 2179855 - | LysR family transcriptional regulator TERM 1368 2181161 - 2181124 - g 71 -12.5 -3.28712 | CGTCCTCGTCGACAA CCGCCCCGGCGCAGGCG GCAT CGTCGGCACCGGCACGG CGGCCAAGTCCCCGG TERM 1369 2181833 - 2181795 - g 76 -14.4 -3.05844 | opp_overlap 2181830 CCGTGCAGGCCAAGA TGCGCGAACTCGGCGCCG AAC CGGCACCGAGCACGCCCG ACGCCTTCGCCGAGG Rmet_5574 2180921 - 2181913 + | hypothetical protein Rmet_5575 2181971 - 2182990 + | hypothetical protein Rmet_5576 2183020 - 2184243 + | aminotransferase, class I and II Rmet_5577 2184576 - 2184253 - | hypothetical protein Rmet_5578 2184785 - 2185051 + | hypothetical protein TERM 1370 2185108 - 2185080 - g 80 -14.5 -3.16564 | opp_overlap 2185086 2185105 2185107 CGCGGACCGGACGAA CGCCCCCGACACG ATT CGCGTCTGGGACG TGGTCGTGCGTTTCA Rmet_5579 2185054 - 2185608 + | cytochrome B561 TERM 1371 2185823 - 2185797 - f 76 -12.2 -3.2827 | opp_overlap 2185796 2185812 GTACCGAAGGAGCAA GCGGCACGCGTA TTG TTCGTGTGCCGC GAATCTCTCAGGTCA Rmet_5580 2185916 - 2187184 + | D-amino acid dehydrogenase small subunit TERM 1372 2187220 - 2187237 + T 100 -14.1 -4.17657 | opp_overlap 2187220 CCAAAAACGAAAAAA GCCCCGC TTGC GCGGGGC TTTTCGAATCTGGTG TERM 1373 2187237 - 2187220 - T 100 -14.1 -5.54079 | opp_overlap 2187220 CCAAAAACGAAAAAA GCCCCGC TTGC GCGGGGC TTTTCGAATCTGGTG Rmet_5581 2189057 - 2187411 - | diguanylate cyclase TERM 1374 2187735 - 2187714 - G 85 -12.3 -4.07885 | CAGGCGGGCGCAAAA CTGCGTGCC ATCG AGCACGCAG GTCAAGGCCGTCGCG TERM 1375 2188463 - 2188436 - G 75 -3.3 -4.80882 | gap 1, overlap 2188439 AGGCGAGATGAAAAA CAAGCG-GCAGC GCCAG GCCGCACGCCAG GATATTCCGCCCGCG TERM 1376 2188460 - 2188439 - G 76 -5.8 -4.50988 | gap 1, overlap 2188436 CGAGATGAAAAACAA GCG-GCAGC GCCAG GCCGCACGC CAGGATATTCCGCCC Rmet_5582 2189095 - 2189601 + | hypothetical protein Rmet_5583 2189634 - 2189975 + | hypothetical protein Rmet_5584 2190552 - 2190040 - | putative transmembrane protein Rmet_5585 2192128 - 2190686 - | major facilitator transporter TERM 1377 2192003 - 2192038 + gH 71 -3.8 -4.46926 | gap 1, overlap 2192014 GTCCTCCATTTCATG CGCACCGGTGCGGCGGT TCA ACCGACATTTCGG-GCG TTTTGTCATGCGCTG Rmet_5586 2192127 - 2193128 + | LysR family transcriptional regulator Rmet_5587 2193179 - 2193565 + | hypothetical protein Rmet_5588 2195190 - 2193586 - | phospholipase D/transphosphatidylase Rmet_5589 2196039 - 2195212 - | MscS mechanosensitive ion channel Rmet_5590 2197800 - 2196343 - | RND efflux system, outer membrane lipoprotein, NodT TERM 1378 2197656 - 2197674 + g 72 -8.8 -4.1721 | overlap 2197657 TCTGGCTGTCGGTGC CTTCCCCG GCG CGGGGAAA TTTTCCGGTGTCGAT Rmet_5591 2199377 - 2197803 - | EmrB/QacA family drug resistance transporter Rmet_5592 2200515 - 2199370 - | secretion protein HlyD Rmet_5593 2200623 - 2201324 + | TetR family transcriptional regulator TERM 1379 2201367 - 2201390 + F 75 -8.2 -4.27316 | opp_overlap 2201356, overlap 2201358 2201369 ATCATGTCGCGCCGG GCGATAGTTG GACG CAACTATCTC TTTTAAATTAGGCGC TERM 1380 2201369 - 2201388 + F 71 -9.4 -3.7398 | opp_overlap 2201356, overlap 2201358 2201367 CATGTCGCGCCGGGC GATAGTTG GACG CAACTATC TCTTTTAAATTAGGC TERM 1381 2201908 - 2201873 - g 71 -14 -2.71364 | gap 1, overlap 2201877 CTATCGCGTGAACGA CCAACGCA-GCGCCTTC ACC GACGGCGCACGCGTCGG CAAGACCGACCCGTA Rmet_5594 2201748 - 2202245 + | hypothetical protein TERM 1382 2202508 - 2202555 + F 95 -20 -2.71791 | opp_overlap 2202512, overlap 2202508 GCCATCAGTGCGCAA TCCAGCGCGGCGTGAATGCA CTCTGCCA TGCGTTCACGCCGCGTTGGC ATTTGCGCGCACCAT TERM 1383 2202508 - 2202556 + F 100 -18.4 -3.53224 | gap 1, opp_overlap 2202512, overlap 2202508 GCCATCAGTGCGCAA T-CCAGCGCGGCGTGAATGCA CTCTGCCA TGCGTTCACGCCGCGTTGGCA TTTGCGCGCACCATG TERM 1384 2202551 - 2202512 - f 76 -14.3 -2.52896 | opp_overlap 2202508 2202508 TCAGTGCGCAATCCA GCGCGGCGTGAATGCAC TCTGCC ATGCGTTCACGCCGCGT TGGCATTTGCGCGCA Rmet_5595 2202631 - 2203095 + | Kef-type K+ transport system NAD-binding component-related membrane protein Rmet_5596 2203277 - 2204176 + | MltA-interacting MipA Rmet_5597 2204913 - 2204200 - | alpha/beta family hydrolase Rmet_5598 2205303 - 2204992 - | hypothetical protein Rmet_5599 2205973 - 2207418 + | catalase-like protein TERM 1385 2207471 - 2207419 - f 95 -17.8 -3.35992 | gap 1 ATCGAGGCCAAGTAA GTCCCCACTACCCATGCCTCTCCCG CCCC CGGGAGAGGCATGGGCGG-AACGAC TCAGCAAATCCCGAA TERM 1386 2207973 - 2207989 + G 71 -9.3 -3.72576 | opp_overlap 2207960 2207952, overlap 2207971 AACCGCGGCATGACC GCAGCCG ATG CGGCGGC TTTCATGGCCGGCCG Rmet_5600 2207511 - 2208023 + | ankyrin Rmet_5601 2208839 - 2208081 - | short-chain dehydrogenase/reductase SDR Rmet_5602 2210040 - 2208949 - | L-threonine ammonia-lyase TERM 1387 2210100 - 2210117 + H 76 -10.5 -3.81691 | opp_overlap 2210100, overlap 2210112 GCGGCCATAAAAAAA CCCGCCT CGTT GGGCGGG TTATTGATGTCTGTT TERM 1388 2210117 - 2210100 - H 100 -9.8 -5.60993 | opp_overlap 2210100 2210112 GCGGCCATAAAAAAA CCCGCC TCGTTG GGCGGG TTATTGATGTCTGTT Rmet_5603 2210511 - 2212280 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1389 2212649 - 2212600 - g 72 -10.9 -3.53012 | overlap 2212601 CGGCGTGGCGCCAAA TCGTCCGCAGGCCA-C-GCGCGCGT TGCA ACGCGCGCTGGTGGCCGGC-GA-GA TCACGCGGGCGCTGA Rmet_5604 2212280 - 2213722 + | putative signal transduction protein Rmet_5605 2214392 - 2213742 - | carbonic anhydrase TERM 1390 2215287 - 2215345 + G 83 -14.5 -3.2048 | overlap 2215330 AACTGCCGCTGCCGC CGCGCCGTGCCGCGCTACTGC-AACGGCG TGG CGCCTATCGCACTGCCGCGGCGCG-CGCG TTCGTGGCATTTGCG Rmet_5606 2214500 - 2215402 + | DNA-binding transcriptional regulator CynR Rmet_5607 2216690 - 2215371 - | major facilitator transporter Rmet_5608 2216840 - 2217889 + | ubiquinol oxidase, subunit II Rmet_5609 2217971 - 2219974 + | cytochrome c oxidase, subunit I TERM 1391 2220188 - 2220227 + G 71 -12.2 -3.24188 | gap 1 GGGACCGAGCGGCGC CGAGCTGTTC-GAGCTACC ACT GGTGGCGCTGAACACCTCG TTCCTGCTGATATCG Rmet_5610 2219967 - 2220623 + | cytochrome c oxidase, subunit III Rmet_5611 2220620 - 2221048 + | cytochrome C oxidase subunit IV Rmet_5612 2222608 - 2221067 - | methyl-accepting chemotaxis sensory transducer TERM 1392 2221647 - 2221693 + g 77 -11.5 -3.69395 | gap 1, overlap 2221637 TTGACCGCCAGACCG CTGGCCTGCTTCGCGCTGTCAG CGTT CTGGC-GCACGATGCTGGTCAG TTCTTCCATGCTCGA Rmet_5613 2224119 - 2222821 - | major facilitator transporter TERM 1393 2224203 - 2224217 + r 73 -4.3 -4.62069 | GTCATCACCGCTACG TTCTG GCAGG CAGAA TTTTTCGGCTACCGG Rmet_5614 2224996 - 2224226 - | CDP-diacylglycerol pyrophosphatase Rmet_5615 2225597 - 2225208 - | hypothetical protein Rmet_5616 2226623 - 2225634 - | hypothetical protein TERM 1394 2226022 - 2226050 + g 71 -7.4 -4.20025 | gap 1, opp_overlap 2226009 2226008 2226026, overlap 2226028 TCGACTTCCCCCGAA GCCACG-GCCTGC ATTT GCAGGCTTGTGCC TTTGTATTGCACATT Rmet_5617 2226806 - 2227867 + | farnesyl-diphosphate farnesyltransferase Rmet_5618 2228958 - 2227888 - | glycosyl transferase family protein TERM 1395 2227974 - 2227994 + g 74 -10.3 -3.76759 | opp_overlap 2227974, overlap 2227990 GCGGATCGGCAAGCA GTTCGCGGC AGA GCCGCGCGC TTTCATCGCGTTCAT TERM 1396 2229080 - 2229046 - R 77 -15 -2.78463 | AGGGTTCGCACGAGA CTGATGGGCCCGGAGC GAT GCTCCGAGCCCATGAC CCGCCATCAGCCTAT Rmet_5619 2230314 - 2229112 - | triple helix repeat-containing collagen TERM 1397 2230661 - 2230635 - R 77 -7.8 -4.3208 | opp_overlap 2230635 2230636 2230654, overlap 2230636 GCGCAGAACGCAAAA TGCCGGGCGAGC GCT GCCCGGCCGACC TTGTTGGCGTGTTCA TERM 1398 2231002 - 2230979 - R 100 -10.2 -5.03145 | opp_overlap 2230981 2230982 2231000, overlap 2230982 GAAGGCCCCAAAAAA GAAGCCCCGC GAAT GCGGGGCCTT GTTTCCAACCAGATC TERM 1399 2230981 - 2231000 + r 78 -10.6 -3.90744 | opp_overlap 2230979 2230982, overlap 2230982 AGGCCCCAAAAAAGA AGCCCCGC GAAT GCGGGGCC TTGTTTCCAACCAGA TERM 1400 2230999 - 2230982 - R 100 -14.1 -4.61482 | opp_overlap 2230982 2230981, overlap 2230979 GGCCCCAAAAAAGAA GCCCCGC GAAT GCGGGGC CTTGTTTCCAACCAG TERM 1401 2230982 - 2230999 + r 75 -14.1 -2.94232 | opp_overlap 2230979 2230982, overlap 2230981 GGCCCCAAAAAAGAA GCCCCGC GAAT GCGGGGC CTTGTTTCCAACCAG Rmet_5620 2231348 - 2231025 - | hypothetical protein Rmet_5621 2231614 - 2231477 - | hypothetical protein Rmet_5622 2232452 - 2231706 - | hypothetical protein Rmet_5623 2232946 - 2232551 - | peptidylprolyl isomerase, FKBP-type TERM 1402 2233547 - 2233580 + G 73 -13.7 -2.81464 | GTGCTGATCGCGTTC GGCCCGCTGGCGGCG GCCC TGCCGCCCGTGGGGC TGTACTGGCTCGTGG Rmet_5624 2233118 - 2233735 + | hemolysin III family channel protein Rmet_5625 2234998 - 2233751 - | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5626 2235811 - 2235014 - | enoyl-CoA hydratase/isomerase TERM 1403 2235631 - 2235614 - G 72 -8.3 -4.07568 | overlap 2235615 GTTGCCCGGCGAAAA CGCGCGG TCCC CCGCGCC ACGCACGACGACGCA Rmet_5627 2237334 - 2235808 - | hypothetical protein Rmet_5628 2237885 - 2237346 - | hypothetical protein TERM 1404 2237754 - 2237790 + g 71 -14.3 -2.71712 | overlap 2237753 GTTGCTGACCATCAC CACCACCGCGCCGATGG CGA TCAGCAGCGCGGTGGCG ATTTCCGCCGCACGC Rmet_5629 2238929 - 2237928 - | hypothetical protein TERM 1405 2238913 - 2238892 - G 70 -11.5 -3.41134 | overlap 2238888 2238893 ACACCTAGCAACGAA GCGCACGCG AGCG CGCGTGCGG CATAACGCAACGTCA TERM 1406 2238912 - 2238893 - G 74 -15 -2.64199 | overlap 2238888 2238892 CACCTAGCAACGAAG CGCACGCG AGCG CGCGTGCG GCATAACGCAACGTC Rmet_5630 2240237 - 2239032 - | aminotransferase, class V TERM 1407 2239919 - 2239902 - G 74 -12.7 -3.21099 | opp_overlap 2239902 2239901 2239910 2239913 GTCGCCCACGATGAA CTCGGCG TGAA CGCCGAG CTTGTCGGCCATCTT TERM 1408 2240291 - 2240279 - H 80 -3.3 -5.08824 | overlap 2240286 TTTGTATTCAAAAAA CAGAG ATG CACTG CGCGTCCGTCATGCG Rmet_5631 2240488 - 2241177 + | GntR family transcriptional regulator TERM 1409 2242728 - 2242690 - g 75 -14.4 -3.01791 | ACGGCGCGGCCAAGA TGCGCGCCATCGCCGAGG AAG CCGCCGCGATGGTGCGCG AGTACAAGGGCGCTT Rmet_5632 2241264 - 2244287 + | FAD linked oxidase-like protein Rmet_5633 2244374 - 2245309 + | hypothetical protein Rmet_5634 2245558 - 2245893 + | hypothetical protein TERM 1410 2245977 - 2245947 - T 100 -24.8 -4.78848 | CCCGCAAAGAGAAAA GGGCCGAGCCCTGC AAT GCAGGACTCGGCCC CAGTCAGGCCACCCG Rmet_5635 2248451 - 2246013 - | peptidase S45, penicillin amidase Rmet_5636 2250180 - 2248579 - | flavodoxin/nitric oxide synthase TERM 1411 2249466 - 2249446 - G 73 -9.7 -3.83502 | GAGCGCCAGATGAAA GGCAGCC TCGCCCT GGCTGCC CGGATTGAGCAGCCT TERM 1412 2249891 - 2249918 + g 75 -12.6 -3.53091 | opp_overlap 2249873 2249877 2249875 2249872, overlap 2249911 ACGAGTTGCACCGGG CGACCCGCGCCT TGCA ACGCGCGGGCCG TTTGCACGGCGAGCT Rmet_5637 2251190 - 2250177 - | ApbE-like lipoprotein Rmet_5638 2252046 - 2251213 - | hypothetical protein Rmet_5639 2252619 - 2252098 - | hypothetical protein Rmet_5640 2253318 - 2252647 - | PepSY-associated TM helix Rmet_5641 2253694 - 2255253 + | methyl-accepting chemotaxis sensory transducer TERM 1413 2255410 - 2255391 - T 100 -16.4 -5.7946 | opp_overlap 2255391 CTCGTAACAAAAAAA CGCCGCCC ACGA GGGCGGCG TTCTTGCATCGATTG TERM 1414 2255391 - 2255410 + T 93 -16.4 -3.69283 | opp_overlap 2255391 CTCGTAACAAAAAAA CGCCGCCC ACGA GGGCGGCG TTCTTGCATCGATTG Rmet_5642 2256905 - 2255442 - | flagellar hook-associated 2-like protein TERM 1415 2256990 - 2257012 + r 72 -2.6 -4.7254 | ATCCAAGGTTTACGG CGCTCGAAAG TGG CTCTTTAGCG TTTTTCGTACAAAGT Rmet_5643 2257815 - 2257117 - | TetR family transcriptional regulator Rmet_5644 2259268 - 2257832 - | carotenoid oxygenase TERM 1416 2259551 - 2259540 - g 72 -7.2 -4.25104 | CGTGCTGCAGGAAAA GCCG ATCC CGGC CGTCGGCCCCACCGA Rmet_5645 2259481 - 2260554 + | zinc-binding alcohol dehydrogenase TERM 1417 2260643 - 2260598 - f 100 -21.3 -3.31144 | gap 1, opp_overlap 2260595 2260603, overlap 2260602 CCGCCAGTTCCACAA GCCAGCCCCGGGCGTGTTACGT GAC ACGTAACACGCCCGGGGTTT-C TTTTGGCGCGCCGGC TERM 1418 2260640 - 2260602 - f 100 -27.6 -2.59748 | opp_overlap 2260595 2260603, overlap 2260598 CAGTTCCACAAGCCA GCCCCGGGCGTGTTACGT GAC ACGTAACACGCCCGGGGT TTCTTTTGGCGCGCC TERM 1419 2260603 - 2260639 + F 100 -31.1 -4.64861 | opp_overlap 2260602 2260598, overlap 2260595 AGTTCCACAAGCCAG CCCCGGGCGTGTTACGT GAC ACGTAACACGCCCGGGG TTTCTTTTGGCGCGC TERM 1420 2260653 - 2260663 + F 75 -8.2 -4.19817 | overlap 2260649 GGTTTCTTTTGGCGC GCCG GCG CGGC TTTTACGTGCCTGCG Rmet_5646 2260747 - 2261442 + | LuxR family transcriptional regulator Rmet_5647 2262009 - 2261488 - | hypothetical protein Rmet_5648 2262246 - 2262668 + | AsnC family transcriptional regulator Rmet_5649 2263125 - 2262688 - | hypothetical protein Rmet_5650 2263518 - 2263823 + | hypothetical protein TERM 1421 2263831 - 2263815 - f 73 -4.4 -4.60292 | CAGAAGAACAAGAAA CACCAC TGAAG GTAGTG TGAAAGATCGATGCG Rmet_5651 2264000 - 2264206 + | hypothetical protein TERM 1422 2264242 - 2264269 + F 100 -11.3 -5.79526 | ACGATGCAAGCATCT CGCCCGCGA TCCCCCGATT TCGCGGGCG TTTTTTTTGCCATAT TERM 1423 2264909 - 2264867 - g 72 -6.9 -4.2772 | gap 2, opp_overlap 2264887 2264895 2264896, overlap 2264886 CCCAAGGAAGACAAA CCCTCCGGTCACGGACACAGC CAC GCTGCG-CCG-GACCTGCGCG GCACGGTTTGCATCG Rmet_5652 2264651 - 2265133 + | hypothetical protein Rmet_5653 2265139 - 2266680 + | hypothetical protein TERM 1424 2266741 - 2266709 - f 95 -20.6 -2.52464 | opp_overlap 2266710 GTTCGCTGTAACGGA TGCGGCCGGATGCC TTCAG GGCATCCGGCCGCT TTCTCTTTTGGGCTG TERM 1425 2266710 - 2266740 + F 100 -24.8 -4.45771 | opp_overlap 2266709 TTCGCTGTAACGGAT GCGGCCGGATGCCT TCA GGGCATCCGGCCGC TTTCTCTTTTGGGCT Rmet_5654 2266858 - 2267247 + | putative dehydrogenase Rmet_5655 2267349 - 2267681 + | hypothetical protein Rmet_5656 2268170 - 2267694 - | hypothetical protein TERM 1426 2268425 - 2268446 + H 70 -12.3 -2.90901 | gap 1, opp_overlap 2268415 2268412 AATAGCGCCCCGCGC GGCGGACGCC CCT GGC-TCCGCC TCTCCTTGCACCTCT Rmet_5657 2268480 - 2269733 + | putative heat shock protein Rmet_5658 2270945 - 2269758 - | diguanylate cyclase Rmet_5659 2271527 - 2270994 - | isochorismatase hydrolase Rmet_5660 2274202 - 2271683 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1427 2271801 - 2271768 - G 91 -10.9 -4.5442 | overlap 2271769 2271770 CTGGCAAGCAGAAAA CCCTGCGCGCGGTCG CAAC CGATCTCGCGCAGAA ACTGCAGTTGGGCGA TERM 1428 2271800 - 2271769 - G 73 -12.2 -3.3217 | overlap 2271768 2271770 TGGCAAGCAGAAAAC CCTGCGCGCGGTCG CAAC CGATCTCGCGCAGA AACTGCAGTTGGGCG TERM 1429 2274352 - 2274337 - R 70 -10.4 -3.53031 | opp_overlap 2274337 2274335, overlap 2274333 GGTACGGTAAAGGAA TCGGCC ATCC GGCCGA TGTTCGATCTTGGGG Rmet_5661 2274742 - 2274377 - | hypothetical protein Rmet_5662 2274815 - 2275156 + | hypothetical protein TERM 1430 2275199 - 2275158 - T 87 -17.4 -3.05816 | TCATCGTGGATTGAA GCAGCCGGGACGCCC-GGCC ATGC GGCCCGGGCATCCCA-CTGC GAGACATTACTGAGC Rmet_5663 2276273 - 2275206 - | periplasmic phosphate binding protein Rmet_5664 2276961 - 2276464 - | hypothetical protein TERM 1431 2276607 - 2276641 + g 100 -9.1 -4.87665 | AGTTGGCCCAGACTT GGCCAGGGCCTCCGC CCGGT GCGGCGGCGGTGGTC TTTTTCTCGGTGGCA Rmet_5665 2278104 - 2277130 - | NmrA-like protein Rmet_5666 2278221 - 2279141 + | LysR family transcriptional regulator Rmet_5667 2279403 - 2279783 + | hypothetical protein Rmet_5668 2280713 - 2279814 - | copper resistance D Rmet_5669 2281118 - 2280732 - | copper resistance protein CopC Rmet_5670 2282239 - 2281157 - | copper resistance B precursor Rmet_5671 2284053 - 2282236 - | copper-resistance protein CopA Rmet_5672 2284249 - 2284935 + | two component heavy metal response transcriptional regulator Rmet_5673 2284935 - 2286323 + | heavy metal sensor signal transduction histidine kinase TERM 1432 2286327 - 2286345 + T 89 -17.4 -3.21912 | GCGCAAGCCTGATCA GGCGCGCG CGA CGCGCGCC TTGCTGCGTTCCAGC Rmet_5674 2286755 - 2286324 - | protein of unknown function DUF395, YeeE/YedE Rmet_5675 2287194 - 2286757 - | protein of unknown function DUF395, YeeE/YedE Rmet_5676 2287524 - 2287204 - | ArsR family transcriptional regulator Rmet_5677 2288917 - 2287658 - | hypothetical protein Rmet_5678 2290011 - 2288914 - | heavy metal efflux pump CzcA TERM 1433 2289414 - 2289448 + g 73 -12 -3.31144 | opp_overlap 2289394 CCAGCGCCAGCGGCA CCACCAGCGCGAGACG GGC CGCCGCGCGTTGCTGG TTCTCGAACTGGCCA Rmet_5679 2290916 - 2290023 - | integrase catalytic subunit Rmet_5680 2291209 - 2290913 - | transposase IS3/IS911 Rmet_5681 2293312 - 2291237 - | acriflavin resistance protein Rmet_5682 2294412 - 2293312 - | secretion protein HlyD Rmet_5683 2294949 - 2294500 - | hypothetical protein TERM 1434 2294719 - 2294689 - G 75 -3.9 -4.68645 | gap 1, opp_overlap 2294689, overlap 2294684 2294690 2294691 CAGGGAAAAGGAAAA CG-GCCCGATGGCG GTTT CGACATCGACCTCG AAGGGCTCGCGATGA TERM 1435 2295274 - 2295238 - H 91 -5.8 -5.4433 | gap 1, overlap 2295241 2295256 ACATATAAAGAAAAA GGAGCACACATGGGACA ACCC TGCCCCACG-GTGCGAC ATGGTCACGCGCGTA TERM 1436 2295271 - 2295241 - H 70 -10.5 -3.47541 | gap 1, overlap 2295238 2295256 TATAAAGAAAAAGGA GCACACATGGGACA ACCC TGCCCCACG-GTGC GACATGGTCACGCGC Rmet_5684 2295247 - 2295750 + | pilus assembly protein PilE Rmet_5685 2295754 - 2296248 + | pilus assembly protein FimT Rmet_5686 2296248 - 2296856 + | Tfp pilus assembly protein PilV-like protein Rmet_5687 2296853 - 2297896 + | type 4 fimbrial biogenesis pilw-related protein transmembrane precursor TERM 1437 2297940 - 2297964 + G 78 -13.7 -3.23692 | opp_overlap 2297923, overlap 2297940 CGGCGCAACGCTCCT GATCACGATGA TCT TCGTCGTGATC TTCCTGCTGCTGGTC Rmet_5688 2297893 - 2298438 + | putative transmembrane protein Rmet_5689 2298484 - 2301792 + | putative type 4 fimbrial biogenesis pily1-related protein signal peptide Rmet_5690 2301898 - 2303091 + | putative lipoprotein Rmet_5691 2304017 - 2303244 - | protein of unknown function DUF899, thioredoxin-like protein Rmet_5692 2304107 - 2305327 + | hypothetical protein Rmet_5693 2305357 - 2305995 + | hypothetical protein Rmet_5694 2306697 - 2306056 - | hypothetical protein Rmet_5695 2306740 - 2307615 + | beta-lactamase-like protein TERM 1438 2307616 - 2307646 + F 88 -19.1 -2.53876 | opp_overlap 2307619 CAGGTCGCGTTCTAA GGAGCGATGCCGC AATCC GTGGCATCGCTCC TGCCTTCAGATCGAG Rmet_5696 2307665 - 2308084 + | hypothetical protein Rmet_5697 2308523 - 2308215 - | hypothetical protein TERM 1439 2309601 - 2309581 - H 80 -11.9 -3.76379 | CAACATCCGAGCAAA GCGATTGCC TTG GGCAATCAC AATGAGGAGTAACGG Rmet_5698 2309643 - 2309885 + | hypothetical protein TERM 1440 2309967 - 2309937 - T 100 -17.6 -4.18018 | GCGCGCCATGCAAAA CGCCGCGAAACCCC CAA AGGATCTCGCGGCG CCCATCAGGCAGGAC Rmet_5699 2311352 - 2310009 - | hypothetical protein TERM 1441 2310712 - 2310751 + g 74 -11.2 -3.64822 | opp_overlap 2310710, overlap 2310713 ATCTCGCCATACAGC TCGGGCGCATCGCCGCGC TCGA GCACCGTGAAGCGCCCGC TTTGGGTCAGGGCAT TERM 1442 2310713 - 2310750 + g 77 -14.7 -2.78679 | opp_overlap 2310710, overlap 2310712 TCTCGCCATACAGCT CGGGCGCATCGCCGCGC TCGA GCACCGTGAAGCGCCCG CTTTGGGTCAGGGCA TERM 1443 2311046 - 2311060 + g 72 -12.8 -3.06492 | opp_overlap 2311008 CTTCGCGACCCACCG CCGCGC CAA GCGCGG TCTTGAACTGGGTGC Rmet_5700 2312054 - 2311374 - | hypothetical protein TERM 1444 2312097 - 2312082 - R 89 -10.4 -4.46835 | overlap 2312083 AGAATGTGAAAGAAA GCAGCC AGGC GGCTGC AAGCCGCTATCGCCT Rmet_5701 2313201 - 2312128 - | hypothetical protein Rmet_5702 2314346 - 2313192 - | hypothetical protein Rmet_5703 2315402 - 2314488 - | two component transcriptional regulator Rmet_5704 2315443 - 2315763 + | hypothetical protein Rmet_5705 2316097 - 2316801 + | MIP family channel protein TERM 1445 2317191 - 2317170 - g 73 -13.7 -2.79302 | gap 1 AGTATCGCGATGAGA CCCGC-CGCG GCG CGCGTGCGGG CCGTTGAACCACGGC Rmet_5706 2316818 - 2317198 + | hypothetical protein Rmet_5707 2317479 - 2318312 + | two component transcriptional regulator TERM 1446 2318339 - 2318317 - T 100 -19.2 -3.51365 | CCAGAGTCTAGAGAA CCATGCCCGC CCT GCGGGCATGG CACCATCCCGCACCA TERM 1447 2318417 - 2318391 - T 100 -18.1 -4.28656 | opp_overlap 2318391 AGCGAACATGCAAAA GGCCGTTACCC GATAT GGGTAACGGCC TTTTTGTTTGTCTGA TERM 1448 2318391 - 2318417 + T 100 -18.8 -5.42975 | opp_overlap 2318391 AGCGAACATGCAAAA GGCCGTTACCCG ATA TGGGTAACGGCC TTTTTGTTTGTCTGA Rmet_5708 2319252 - 2318563 - | SmpA/OmlA Rmet_5709 2319696 - 2319436 - | hypothetical protein TERM 1449 2319657 - 2319671 + g 100 -5.6 -5.53288 | overlap 2319640 2319658 CGGCAGCGTTGCGGG AGACGC TGT GCGTCA TTTTTTTGCATTCGG TERM 1450 2319658 - 2319670 + g 73 -9.1 -3.90888 | overlap 2319640 2319657 GGCAGCGTTGCGGGA GACGC TGT GCGTC ATTTTTTTGCATTCG TERM 1451 2322896 - 2322884 - g 77 -4.7 -4.59773 | CGGCAGCTTGAAAAA CTCGG CCA CCGCG CGTTCACCGCAAGTG Rmet_5710 2320130 - 2323252 + | PAS/PAC sensor hybrid histidine kinase Rmet_5711 2323436 - 2324902 + | tetratricopeptide TPR_2 Rmet_5712 2324929 - 2325159 + | TPR repeat-containing protein Rmet_5713 2325869 - 2325195 - | Hpt domain-containing protein Rmet_5714 2326516 - 2325884 - | two component LuxR family transcriptional regulator Rmet_5715 2327129 - 2326812 - | hypothetical protein Rmet_5716 2327314 - 2328105 + | hypothetical protein Rmet_5717 2328721 - 2328161 - | putative serine protease protein TERM 1452 2328844 - 2328815 - g 75 -7.7 -4.23781 | overlap 2328810 TGCAGCAAAAGCAAA GCCTCAGCGCCAT AGCC AGGGCCCTGGGGC GTGACAAGAGCACTA Rmet_5718 2328739 - 2329767 + | integrase catalytic subunit Rmet_5719 2330790 - 2329756 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1453 2329911 - 2329967 + g 76 -9.9 -4.09243 | opp_overlap 2329920 TCAACGAAGCATTCT CCGACAGCAGCATTGCGGCAACGCCGG TCA CATGAGGTGCCGCGATGCTGGTGCCAG TTTTGAGCCCATATC TERM 1454 2330638 - 2330651 + g 70 -2.3 -4.66609 | opp_overlap 2330629, overlap 2330629 CACGAAGCCTGTCGG CAGGA ATTT TCCGG TTTTTGCATCGGCTA Rmet_5720 2331324 - 2330854 - | hypothetical protein TERM 1455 2331460 - 2331439 - R 100 -17.3 -4.67353 | opp_overlap 2331439 GTATCCATGCAAAAA GGCCACGGC ATAT GCCGTGGCC TTTTCGATCTGGTAG TERM 1456 2331439 - 2331460 + r 100 -17.3 -4.24948 | opp_overlap 2331439 GTATCCATGCAAAAA GGCCACGGC ATAT GCCGTGGCC TTTTCGATCTGGTAG Rmet_5721 2332586 - 2331528 - | porin TERM 1457 2333396 - 2333412 + G 71 -10.1 -3.63744 | overlap 2333394 2333397 ATGACATCACTCCGG TTCGCGC GTG GCGCGAG TATTTTGGCCACACA Rmet_5722 2333158 - 2333583 + | XRE family transcriptional regulator Rmet_5723 2333645 - 2334010 + | hypothetical protein Rmet_5724 2334195 - 2336549 + | PAS/PAC sensor hybrid histidine kinase Rmet_5725 2337813 - 2336824 - | hypothetical protein Rmet_5726 2338679 - 2337954 - | hexapaptide repeat-containing transferase TERM 1458 2338506 - 2338479 - G 72 -8.4 -4.1673 | gap 1 GAACCCGCCAATAAA TGCCGGCGC-GTA GGC CACAGCGCCGTCA CCAATATCAATCGCT Rmet_5727 2340237 - 2338693 - | hypothetical protein TERM 1459 2339143 - 2339123 - G 70 -5.3 -4.42806 | opp_overlap 2339128, overlap 2339119 TTACGGCCAAAGAAA GCCTTTCCA ACC TGGATTGGC TTGATGCCGGCCAAG TERM 1460 2339263 - 2339277 + g 72 -12.8 -3.06796 | CAGACGCTCCTCCTG GCCGGG GAA CCCGGC TTCGATCAACTCGCG TERM 1461 2339722 - 2339704 - G 74 -5.3 -4.56597 | gap 1, overlap 2339719 TTGCCCTGTGAAAAA GCTCT-CG CAAA CGTAGAGC TGCCCTTGACGGCGC Rmet_5728 2341217 - 2340219 - | glycosyl transferase, group 1 Rmet_5729 2343039 - 2341219 - | polysaccharide export protein TERM 1462 2341694 - 2341714 + g 76 -9.7 -4.11692 | opp_overlap 2341710, overlap 2341696 TCCTCGTTAGTTCCG GAGCGTGCT GTA AGCACGCTG TTTTGCAACTGCGTG TERM 1463 2341696 - 2341712 + g 77 -12.3 -3.65542 | opp_overlap 2341710, overlap 2341694 CTCGTTAGTTCCGGA GCGTGCT GTA AGCACGC TGTTTTGCAACTGCG TERM 1464 2342130 - 2342108 - G 70 -6.2 -4.27316 | overlap 2342109 CCGTTGAATTCAAAA CGCCTGGC GCTCGCT GCCAGGCC GCCGACCATCACTGT Rmet_5730 2344156 - 2343050 - | chain length determinant protein Rmet_5731 2344818 - 2344153 - | ABC transporter related Rmet_5732 2345723 - 2344815 - | ABC-type polysaccharide/polyol phosphate export systems permease component TERM 1465 2345168 - 2345157 - G 83 -2.2 -5.16841 | CCACAGCAAGAAAAA GCCA AGCA TGAC CAGCATCGGGTTCGT TERM 1466 2345580 - 2345549 - G 79 -5.8 -4.63218 | gap 1, overlap 2345524 2345550 2345551 CTTCGCGCAAGAAAA GC-GCGCGCCAGACT GTG AGCGTGACACGCAGC GGTGCGGGGATGGTC TERM 1467 2346849 - 2346880 + G 88 -14.4 -3.85698 | gap 1, overlap 2346850 TGGTGGAACTCGCGC G-GGCCGGCGTTGCC GTC GGCATTGCCGGCCTC TTTCTGGAAGCGCAC TERM 1468 2346850 - 2346878 + G 93 -18.1 -3.51934 | overlap 2346849 GGTGGAACTCGCGCG GGCCGGCGTTGCC GTC GGCATTGCCGGCC TCTTTCTGGAAGCGC Rmet_5733 2346185 - 2347024 + | 2-dehydro-3-deoxyphosphooctonate aldolase Rmet_5734 2347024 - 2347767 + | 3-deoxy-manno-octulosonate cytidylyltransferase Rmet_5735 2347807 - 2348769 + | KpsF/GutQ family protein TERM 1469 2348846 - 2348873 + G 85 -5.4 -5.00616 | overlap 2348839 GGTGGTCACTCCGGG CCTGTGGCGCAC GCCC GGGCTTCGCAGG TTTTTTCACGAGGGC Rmet_5736 2348820 - 2350868 + | capsule polysaccharide biosynthesis Rmet_5737 2350874 - 2352259 + | capsule polysaccharide biosynthesis TERM 1470 2352610 - 2352630 + F 100 -10.4 -5.81412 | ACACTTCCCCGTATG GCCGCTTC CTCCC GGAGCGGC TTTTTTTTGAATCAG Rmet_5738 2353344 - 2353955 + | hypothetical protein Rmet_5739 2354087 - 2354434 + | hypothetical protein TERM 1471 2354496 - 2354472 - g 100 -12.9 -5.47399 | overlap 2354474 GCAAGCGCAAAAAAA GACGCCCATCT TCG AGATGGGCGTA GCGGGAAAAGATCGT TERM 1472 2354494 - 2354474 - g 100 -15.5 -4.36993 | overlap 2354472 AAGCGCAAAAAAAGA CGCCCATCT TCG AGATGGGCG TAGCGGGAAAAGATC TERM 1473 2354561 - 2354530 - g 77 -13 -3.4052 | opp_overlap 2354527 2354531, overlap 2354531 GGTCAATTCAACGAA TCTGCCAGCGGGTC GGGT AACCCGCTGGCAAC GTCTAGTATCCGTAT TERM 1474 2354560 - 2354531 - g 81 -16.5 -2.63991 | opp_overlap 2354527 2354531, overlap 2354530 GTCAATTCAACGAAT CTGCCAGCGGGTC GGGT AACCCGCTGGCAA CGTCTAGTATCCGTA Rmet_5740 2354440 - 2354697 + | hypothetical protein Rmet_5741 2356369 - 2354675 - | peptidase MprA TERM 1475 2356596 - 2356571 - R 71 -6.7 -4.26903 | overlap 2356573 TTGACGGCATGAAAA GACCGCCCAGC GAAC ACTGGGCGGGG AAGGGGAGTTGCGGC TERM 1476 2356594 - 2356573 - R 91 -13.7 -3.73756 | overlap 2356571 GACGGCATGAAAAGA CCGCCCAGC GAAC ACTGGGCGG GGAAGGGGAGTTGCG Rmet_5742 2356961 - 2356695 - | hypothetical protein Rmet_5743 2358767 - 2357064 - | AMP-dependent synthetase and ligase Rmet_5744 2358964 - 2359392 + | hypothetical protein TERM 1477 2359580 - 2359566 - g 86 -2.8 -5.1101 | opp_overlap 2359566 CCACGATCGAAAAAA TCTCTT GTA ATGAGA TCGATTCCTATTTAC TERM 1478 2359713 - 2359731 + G 77 -11.7 -3.78775 | GACTTTTGTGGGGAC CGCTCCG AAACA CGGAGCG TTTGGTAGTAGCCAG Rmet_5745 2359433 - 2359975 + | hypothetical protein Rmet_5746 2359972 - 2360445 + | ferric uptake regulator family protein Rmet_5747 2360566 - 2360922 + | hypothetical protein Rmet_5748 2361847 - 2360936 - | hypothetical protein TERM 1479 2361121 - 2361095 - G 74 -13.1 -3.21099 | gap 1 CGGCGGGATCAGGAA GGTCACGGTCAG CGAT CTGACCG-GACC CAGGTCGGCAATCAG TERM 1480 2362234 - 2362261 + H 100 -15.6 -5.67063 | opp_overlap 2362237, overlap 2362237 CCGACGCATTCCCGA CAAGCCGCCAGG CAAT CCTGGCGGCTTC TTTTTTTGTCGTGAC TERM 1481 2362258 - 2362237 - H 93 -17.3 -3.30243 | opp_overlap 2362237 2362234 ACGCATTCCCGACAA GCCGCCAGG CAAT CCTGGCGGC TTCTTTTTTTGTCGT TERM 1482 2362237 - 2362258 + H 100 -17.3 -4.9041 | opp_overlap 2362237, overlap 2362234 ACGCATTCCCGACAA GCCGCCAGG CAAT CCTGGCGGC TTCTTTTTTTGTCGT Rmet_5749 2362336 - 2362719 + | PadR family transcriptional regulator TERM 1483 2362754 - 2362781 + T 100 -18.4 -4.7923 | opp_overlap 2362754 GCTTGAATGACGAAA CCGGCACGCCGC GCCA GCGGCCTGCCGG TTTGTTTGTTTGGGT TERM 1484 2362781 - 2362754 - T 100 -18.4 -3.84246 | opp_overlap 2362754 GCTTGAATGACGAAA CCGGCACGCCGC GCCA GCGGCCTGCCGG TTTGTTTGTTTGGGT Rmet_5750 2364645 - 2362900 - | diguanylate cyclase/phosphodiesterase TERM 1485 2363020 - 2363040 + g 74 -5.4 -4.52589 | opp_overlap 2362994 ATCGCATCCTTCGGC GCGCAG GAAATCGAA CTGCGC TTTTGTCTCCACGCC TERM 1486 2364016 - 2363993 - G 75 -15.3 -2.78463 | ATGCGCGCCACCACA TCGCGGGGC CGCACC GCCCCGCGA ATGCGGTCGGCGATG Rmet_5751 2364664 - 2366652 + | diguanylate cyclase Rmet_5752 2367189 - 2366734 - | hypothetical protein Rmet_5753 2367316 - 2367666 + | hypothetical protein TERM 1487 2367732 - 2367695 - f 83 -16.4 -3.10012 | gap 2, opp_overlap 2367693 2367691 AACCTGACCAGGCAA CCGCCGCC-G-GCGTGCA TCTA TGCACGCACCGGCGGCAG GGACTTTGCTCCCGT Rmet_5754 2367832 - 2368128 + | fumarate hydratase, class II Rmet_5755 2369145 - 2368117 - | integrase catalytic subunit TERM 1488 2369040 - 2369069 + g 75 -7.7 -4.23781 | overlap 2369035 TAGTGCTCTTGTCAC GCCCCAGGGCCCT GGCT ATGGCGCTGAGGC TTTGCTTTTGCTGCA TERM 1489 2370261 - 2370245 - g 70 -7.9 -3.9461 | CGCGGTGAAGAAGAA CCTCTCG TTG CGCGAGG CCGCCATCGCATCAG Rmet_5756 2369163 - 2370341 + | fumarate lyase TERM 1490 2370423 - 2370390 - T 100 -24.1 -3.60151 | opp_overlap 2370390 TGGTTGAAACGACAA GGCCAGGCAAGTGAA GGGA TTCACTTGCCTGGCC TTTTTAGCCACCGGC TERM 1491 2370390 - 2370423 + T 100 -24.1 -4.56597 | opp_overlap 2370390 TGGTTGAAACGACAA GGCCAGGCAAGTGAA GGGA TTCACTTGCCTGGCC TTTTTAGCCACCGGC Rmet_5757 2371620 - 2370457 - | porin Rmet_5758 2373178 - 2371847 - | major facilitator transporter Rmet_5759 2374337 - 2373228 - | hypothetical protein Rmet_5760 2375153 - 2374350 - | peptidase C26 TERM 1492 2374863 - 2374850 - G 82 -5.9 -4.82667 | GCAGCAGACCAAAAA CCGCG GCGT CACGG TGGGGGTCCTGGCAT Rmet_5761 2375270 - 2376217 + | LysR family transcriptional regulator TERM 1493 2376566 - 2376538 - g 70 -10.9 -3.35679 | overlap 2376542 CGCGGTCACGGACAA CGCAGCCATTGCC ACG GGCATTGGCCTCG GTGTGCAGGCTGGCG Rmet_5762 2376371 - 2376907 + | hypothetical protein Rmet_5763 2376904 - 2377410 + | hypothetical protein Rmet_5764 2377885 - 2377442 - | hypothetical protein TERM 1494 2377925 - 2377939 + H 71 -7 -4.15222 | opp_overlap 2377914 2377915, overlap 2377926 CAAAGCGGCATTTAC CGCCGG AAT CCGGCA TTTATTCCCAGGAAT Rmet_5765 2378004 - 2378432 + | hypothetical protein TERM 1495 2378469 - 2378446 - f 76 -12.4 -3.30214 | opp_overlap 2378465, overlap 2378447 2378449 AAGCCACGACAGCAA TCAGGTGGGC CCTG GCCCACCTGC GCTACCCGCAGCGTT TERM 1496 2378468 - 2378447 - f 78 -15.9 -2.57647 | opp_overlap 2378465, overlap 2378446 2378449 AGCCACGACAGCAAT CAGGTGGGC CCTG GCCCACCTG CGCTACCCGCAGCGT Rmet_5766 2378523 - 2378780 + | hypothetical protein Rmet_5767 2379669 - 2378908 - | Crp/FNR family transcriptional regulator TERM 1497 2379565 - 2379553 - G 70 -4.8 -4.41548 | overlap 2379505 2379504 2379556 GGACAGCGCACAAAA CCAG TCATG CTGG GCCAGCAGGGCGTTA TERM 1498 2379689 - 2379655 - G 72 -6.5 -4.21275 | gap 1, opp_overlap 2379683 GCAACGCATCGAAAA CGCCAGA-TCTGTCAT CCGG ACGACAGAGTCCGCCG GAGGCGAGATGATAG Rmet_5768 2379759 - 2381393 + | acyl-CoA synthetase TERM 1499 2381460 - 2381435 - T 100 -23.3 -5.08824 | opp_overlap 2381435 GCTTGATGGAAAAAA CGCGCGGCGGG TCGC CCCGCCGCGCG TTTTTTATCGACATT TERM 1500 2381435 - 2381460 + T 100 -23.3 -5.25803 | opp_overlap 2381435 GCTTGATGGAAAAAA CGCGCGGCGGG TCGC CCCGCCGCGCG TTTTTTATCGACATT Rmet_5769 2383064 - 2381481 - | hypothetical protein TERM 1501 2383237 - 2383266 + r 73 -9.9 -3.58343 | gap 1, overlap 2383243 ACGCCAGCGGCTTCA GCCTCCG-CGCGCG CGG CGCGCTTCGTAGGC TTTCAGGCTGGTCAG TERM 1502 2383243 - 2383257 + r 74 -12.8 -3.2048 | overlap 2383237 GCGGCTTCAGCCTCC GCGCGC GCG GCGCGC TTCGTAGGCTTTCAG Rmet_5770 2384157 - 2383234 - | 2-dehydropantoate 2-reductase TERM 1503 2384266 - 2384321 + H 100 -24.1 -2.65112 | gap 1, overlap 2384258 CGAATGGCCCGGAAT CCGGGT-CTCGTGGCGTTGCGCGCGG ATCAG CCGCACGCAGCGCCACGAGCATCAGG TCATGTCAGTAGATT TERM 1504 2384491 - 2384463 - H 73 -10.1 -3.56862 | overlap 2384453 2384464 AGAAAGGTTTCCAAA CCCCGGGAGACGC CGC GCGCCCCCCGGCC ACACTGCACAACCTG TERM 1505 2384490 - 2384464 - H 73 -13.6 -2.73635 | overlap 2384463 GAAAGGTTTCCAAAC CCCGGGAGACGC CGC GCGCCCCCCGGC CACACTGCACAACCT Rmet_5771 2384724 - 2385500 + | enoyl-CoA hydratase Rmet_5772 2385986 - 2385558 - | MarR family transcriptional regulator TERM 1506 2386008 - 2386019 + r 89 -4.4 -5.17054 | ACCCGGGTGATTTAG TTCG CGCG CGAA TTTTTTAAATGTTAT TERM 1507 2386124 - 2386103 - R 81 -13.7 -3.32343 | gap 1 CTCAGACGCGCACAA GGCGG-CGCC GGT GGCGACCGCC CTGGCGGATGCGGCT Rmet_5773 2386473 - 2386144 - | calcium-binding EF-hand TERM 1508 2386949 - 2386967 + H 78 -10.2 -3.86684 | CCCATCGCATTGCGT GCTTGGGC ATC GCCCGGGC TTTCGTCTACGTTAT Rmet_5774 2387014 - 2387883 + | hypothetical protein TERM 1509 2387937 - 2387958 + F 78 -7.3 -4.66833 | opp_overlap 2387933 AAGATGGTAAATTCG GCGGAGT CCCCCGCA ACTCCGC TTTTTCACGTTCCCC TERM 1510 2388258 - 2388238 - g 73 -12.5 -3.35371 | GACATGTCGAACGAA GACCCCGGC CTT GCCGAGGCC GCCTACGACGCTTTC Rmet_5775 2387977 - 2388684 + | haloacid dehalogenase-like hydrolase Rmet_5776 2389749 - 2388724 - | hypothetical protein Rmet_5777 2390108 - 2389773 - | cupin 2, barrel TERM 1511 2391258 - 2391202 - g 84 -15.2 -3.34398 | gap 2, overlap 2391200 CGGCGGCGTGAAATA CCAGCAGGGACCGCTGGCGCTGGGCGTA GCC TACGACCAGCG-CAGCAG-CACCGATGG CACGAACACGATCCG Rmet_5778 2390618 - 2391694 + | porin Rmet_5779 2391740 - 2392195 + | hypothetical protein Rmet_5780 2392271 - 2392978 + | hypothetical protein Rmet_5781 2392980 - 2393627 + | hypothetical protein Rmet_5782 2393856 - 2394161 + | hypothetical protein actP 2394158 - 2395819 + | acetate permease Rmet_5784 2396126 - 2395848 - | hypothetical protein TERM 1512 2395910 - 2395938 + g 93 -17.4 -3.52652 | CTGCGGCGGGCACAC GGCGCGTGCCGG TCGGT CTGGCGCGCGCC TTCTCCTTGCCTGAC Rmet_5785 2396296 - 2396475 + | hypothetical protein Rmet_5786 2396558 - 2397820 + | beta-lactamase Rmet_5787 2397883 - 2398131 + | hypothetical protein TERM 1513 2398165 - 2398212 + T 100 -25.6 -3.1876 | opp_overlap 2398170, overlap 2398169 CCCCGACGTCCAGCA GGCAACGTGGCCGCGTGCGGGT GGAG ACCCGCACGCGGCCACGATCAC TTCATGACTGCCGTT TERM 1514 2398169 - 2398208 + T 100 -29.4 -2.57244 | opp_overlap 2398170, overlap 2398165 GACGTCCAGCAGGCA ACGTGGCCGCGTGCGGGT GGAG ACCCGCACGCGGCCACGA TCACTTCATGACTGC TERM 1515 2398207 - 2398170 - T 100 -32.9 -3.09635 | opp_overlap 2398169 2398165 ACGTCCAGCAGGCAA CGTGGCCGCGTGCGGGT GGAG ACCCGCACGCGGCCACG ATCACTTCATGACTG Rmet_5788 2398861 - 2398214 - | DSBA oxidoreductase Rmet_5789 2399100 - 2399294 + | hypothetical protein TERM 1516 2399349 - 2399310 - T 100 -16.4 -5.24531 | opp_overlap 2399311, overlap 2399311 2399312 AGCCTGGATAAAAAA GGGGCGCGGCGGCACAAC GCCC ATTGTGCCGCCACGCCTT CCCCAAACCGGATCG TERM 1517 2399348 - 2399311 - T 100 -19.9 -3.73995 | opp_overlap 2399311, overlap 2399310 2399312 GCCTGGATAAAAAAG GGGCGCGGCGGCACAAC GCCC ATTGTGCCGCCACGCCT TCCCCAAACCGGATC TERM 1518 2399347 - 2399312 - T 100 -23.4 -2.83915 | opp_overlap 2399311, overlap 2399311 2399310 CCTGGATAAAAAAGG GGCGCGGCGGCACAAC GCCC ATTGTGCCGCCACGCC TTCCCCAAACCGGAT Rmet_5790 2399741 - 2399376 - | cytochrome C oxidase subunit IV Rmet_5791 2400418 - 2399738 - | cytochrome c oxidase, subunit III Rmet_5792 2402397 - 2400421 - | cytochrome c oxidase, subunit I Rmet_5793 2403360 - 2402401 - | ubiquinol oxidase, subunit II TERM 1519 2404713 - 2404725 + G 71 -7.7 -4.13767 | overlap 2404711 GCACCTGCGGGTGAC CGCAT CGG ATGCG TTTTCCGATGGAGCC Rmet_5794 2403472 - 2404869 + | GntR family transcriptional regulator Rmet_5795 2406783 - 2404879 - | OPT superfamily oligopeptide transporter TERM 1520 2407133 - 2407118 - g 71 -10.4 -3.5944 | ATTGACACCGCCAAA TGCCGC GAAC GCGGCA TTGCCGTCGGCAACG TERM 1521 2407653 - 2407610 - g 71 -13.8 -2.73364 | gap 1, overlap 2407638 2407639 CGGGCAGGCGAACTA GGCGGCGCGGGGCTCGATGTC TAC GAAAGCGAGC-CGGCACCGCC CGTCGAACTGTTCGA Rmet_5796 2406794 - 2407801 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Rmet_5797 2409145 - 2407814 - | periplasmic sensor signal transduction histidine kinase TERM 1522 2408370 - 2408384 + g 71 -7.8 -4.09739 | TGGCCCACGGCCTCC TGCCGG GCC TCGGCA TTTTCGGCGCGTTCG Rmet_5798 2409873 - 2409145 - | two component transcriptional regulator TERM 1523 2409267 - 2409240 - G 84 -17.7 -2.72991 | GGATATTGCGAATCA GCGCCGCGCCG AACTTG CGGCGCAGCGC ATGGATATAGACCTC Rmet_5799 2410890 - 2409880 - | glucokinase Rmet_5800 2411575 - 2410895 - | 6-phosphogluconolactonase Rmet_5801 2413147 - 2411657 - | glucose-6-phosphate 1-dehydrogenase TERM 1524 2414015 - 2414002 - g 70 -5.2 -4.3534 | GGGCAACGAGGAAAA GGCG CACATC CGCC AGCTCTACGCGGAAG Rmet_5802 2413151 - 2415253 + | phosphogluconate dehydratase Rmet_5803 2416221 - 2415367 - | MscS mechanosensitive ion channel Rmet_5804 2417269 - 2416352 - | AraC family transcriptional regulator TERM 1525 2417324 - 2417345 + r 74 -12.3 -3.17194 | gap 1 TACGCTTTTCTGCCG GC-GAGCGGC CAT GCCGCTCAGC TTGCCTTGGCCGGAT Rmet_5805 2418600 - 2417341 - | major facilitator transporter TERM 1526 2418830 - 2418806 - H 79 -8.7 -4.17701 | opp_overlap 2418811, overlap 2418807 2418811 TTGAGAAAGCACAAA GTAAATGCGAA CCA TTCGCATTTAT ACTCGCCCAGCCTTG TERM 1527 2418829 - 2418807 - H 72 -12.2 -3.09897 | opp_overlap 2418811, overlap 2418806 2418811 TGAGAAAGCACAAAG TAAATGCGAA CCA TTCGCATTTA TACTCGCCCAGCCTT TERM 1528 2418825 - 2418811 - H 75 -8.6 -4.18693 | opp_overlap 2418811, overlap 2418807 2418806 AAAGCACAAAGTAAA TGCGAA CCA TTCGCA TTTATACTCGCCCAG TERM 1529 2418945 - 2418962 + G 77 -12.7 -3.31144 | TCCGCCTTGCCTTCT GCGCGAC CAGC GTCGCGC TTCTCACCCTCCCCC Rmet_5806 2418875 - 2421070 + | TonB-dependent siderophore receptor TERM 1530 2423092 - 2423044 - g 78 -3.8 -4.72272 | overlap 2423046 CTCGCTGACGAAAAA GCTGGCCGGCC-TGACCGCCTACG CCA CGTACACGTTCACGGAC-GCCACC TACCAGCAAGGCGCG Rmet_5807 2421332 - 2423485 + | TonB-dependent siderophore receptor TERM 1531 2423508 - 2423539 + T 100 -26 -3.31263 | opp_overlap 2423508 2423514, overlap 2423514 CGCCTCACGCACCAA CGGAAACGGCCCGC TTCT GCGGGCCGTTTCCG TTCTCGAACTACGCT TERM 1532 2423539 - 2423508 - T 100 -26 -3.18264 | opp_overlap 2423508 2423514, overlap 2423514 CGCCTCACGCACCAA CGGAAACGGCCCGC TTCT GCGGGCCGTTTCCG TTCTCGAACTACGCT TERM 1533 2423533 - 2423514 - T 95 -16.4 -3.78597 | opp_overlap 2423508 2423514, overlap 2423508 ACGCACCAACGGAAA CGGCCCGC TTCT GCGGGCCG TTTCCGTTCTCGAAC TERM 1534 2423514 - 2423533 + T 95 -16.4 -3.80625 | opp_overlap 2423514 2423508, overlap 2423508 ACGCACCAACGGAAA CGGCCCGC TTCT GCGGGCCG TTTCCGTTCTCGAAC prfC 2425152 - 2423560 - | peptide chain release factor 3 Rmet_5809 2426214 - 2425249 - | ribonuclease BN, putative TERM 1535 2425501 - 2425471 - G 79 -10.4 -4.09628 | overlap 2425472 CACGGCAAACAACAA GGCCGTGATGACGG AGC CCATCATCACGTCG CGCCACGCGATGCGC TERM 1536 2425500 - 2425472 - G 76 -13.9 -3.05054 | overlap 2425471 ACGGCAAACAACAAG GCCGTGATGACGG AGC CCATCATCACGTC GCGCCACGCGATGCG TERM 1537 2426363 - 2426337 - g 73 -13.7 -2.79796 | CGTGAGTTCATCATA GTGCGCGCGGT CAAGC ACCGCGCGGAC ACGCCTGCTAGAGTA Rmet_5810 2426337 - 2426630 + | hypothetical protein Rmet_5811 2427169 - 2426717 - | hypothetical protein TERM 1538 2427445 - 2427469 + H 83 -4.2 -5.14563 | gap 1, overlap 2427446 ATCTACACCGGTTTA CGTGCTCCGTC CCCC GGCGG-GCACC TTTTTTAGTGAGGGA Rmet_5812 2427496 - 2427816 + | hypothetical protein TERM 1539 2427892 - 2427939 + T 78 -13.6 -3.15861 | gap 1, opp_overlap 2427899, overlap 2427909 2427936 GCTGTCCGGGCGGCA G-GACAAAGGAGACTTGGCGA GCGGACG TCGCCAAGTCTCCCTTGGCAC TTACTGCACGTGCTG TERM 1540 2427931 - 2427899 - T 100 -17.9 -3.96148 | opp_overlap 2427892 2427909 GGGCGGCAGGACAAA GGAGACTTGGCGA GCGGACG TCGCCAAGTCTCC CTTGGCACTTACTGC Rmet_5813 2429483 - 2427981 - | sigma-54 dependent trancsriptional regulator Rmet_5814 2429965 - 2429480 - | hypothetical protein TERM 1541 2430220 - 2430205 - R 89 -11.8 -4.20516 | opp_overlap 2430202 2430201 CCCGGAGTCAAGAAA GGGCGC TCTT GCGCCC TCAAATTTTTGCCAC TERM 1542 2430530 - 2430500 - R 74 -11.3 -3.53761 | gap 1, opp_overlap 2430504 2430506, overlap 2430506 CAACGCCCGCGGAAA GAAAA-AGGACGGC CAAG GCCGCCCTGTTTTC ACAGCAAATGGCCAA TERM 1543 2430523 - 2430506 - R 100 -10.5 -5.27335 | opp_overlap 2430506 2430504, overlap 2430500 CCGCGGAAAGAAAAA GGACGGC CAAG GCCGCCC TGTTTTCACAGCAAA Rmet_5815 2431917 - 2430556 - | xanthine/uracil/vitamin C permease TERM 1544 2431561 - 2431537 - G 71 -14.3 -2.74461 | overlap 2431542 GAGGCAGCCTGAAAT GAAAACCGCGC CAA GCGCGGCTTCC CACGGCAAGCCCATG TERM 1545 2431556 - 2431542 - G 100 -12.8 -4.55128 | overlap 2431537 AGCCTGAAATGAAAA CCGCGC CAA GCGCGG CTTCCCACGGCAAGC TERM 1546 2432189 - 2432210 + H 88 -6.5 -4.93812 | overlap 2432190 CCTTGAGTTCGCTGT ACGGTGGTG TGTG CACCATCGG TTTCTTTTATATTTT TERM 1547 2432190 - 2432209 + H 70 -10 -3.52627 | overlap 2432189 CTTGAGTTCGCTGTA CGGTGGTG TGTG CACCATCG GTTTCTTTTATATTT Rmet_5816 2432243 - 2432446 + | cold-shock DNA-binding protein family protein TERM 1548 2432495 - 2432511 + F 100 -10.8 -5.40072 | opp_overlap 2432495 CTCGATCGCGAAGAA CCCGCC TTTAT GGCGGG TTTTTTTACGCCCAA TERM 1549 2432511 - 2432495 - f 73 -10.8 -3.63515 | opp_overlap 2432495 CTCGATCGCGAAGAA CCCGCC TTTAT GGCGGG TTTTTTTACGCCCAA TERM 1550 2433366 - 2433418 + F 72 -11.1 -3.35679 | opp_overlap 2433366 GATACGGACGCAGAA TCGGGTACGCCTAGGGCAGGTTCGC GAT GCTGACAAGCCGTTTGCGTACCCGA TTCTGCGTGGACAAC TERM 1551 2433555 - 2433592 + F 86 -12.7 -3.87869 | opp_overlap 2433529 2433560 2433561 AGTGACTTATCCACG CAGAATCCGGTTCGGCG ATTG CGCTGAAACGGGTTCGG TTTGTCGCAGATTCG Rmet_5817 2433946 - 2435040 + | plasmid encoded RepA protein TERM 1552 2435067 - 2435085 + T 100 -14.6 -5.14563 | opp_overlap 2435067 GGGCGAAACAAAAAA GGCAAGCG TTA CGCTTGCC TTTTTTGCTGCCGGA TERM 1553 2435085 - 2435067 - T 100 -14.6 -5.63517 | opp_overlap 2435067 GGGCGAAACAAAAAA GGCAAGCG TTA CGCTTGCC TTTTTTGCTGCCGGA Rmet_5818 2435346 - 2435143 - | cold-shock DNA-binding protein family protein Rmet_5819 2435768 - 2436424 + | cobyrinic acid a,c-diamide synthase TERM 1554 2436684 - 2436706 + G 74 -13.4 -3.28712 | opp_overlap 2436672 CAACCCCTTCAATGC CCGCCGCATC TAC GATCCGGCGG TTGTGCAGGAGCGCG Rmet_5820 2436430 - 2437446 + | ParB family protein Rmet_5821 2439094 - 2437514 - | putative integrase/recombinase protein TERM 1555 2439803 - 2439775 - H 90 -5.2 -5.34309 | opp_overlap 2439783, overlap 2439779 ATTATTAAAGAAAAA CATACGCAGCGT TGGGT ACGCTTCGTGCG CGGACGCCCCATTGG TERM 1556 2441779 - 2441803 + G 77 -8.4 -4.21194 | CGCGCCCTTCCGGTA CGCCAGCGTG GTCAA CTCGCAGGCG TTTTCGCTGGTGGCC Rmet_5822 2440265 - 2443009 + | ATP-dependent transcription regulator LuxR Rmet_5823 2443959 - 2443072 - | taurine catabolism dioxygenase TauD/TfdA Rmet_5824 2444997 - 2444005 - | hypothetical protein Rmet_5825 2445910 - 2445014 - | short-chain dehydrogenase/reductase SDR TERM 1557 2445514 - 2445537 + g 78 -7.4 -4.42653 | CGTGCACATCCATGA TGGCCGACCA CTGG TCGTCGGTCA TTTTCTGGATCACGT Rmet_5826 2447091 - 2445907 - | lipid-transfer protein Rmet_5827 2448715 - 2447159 - | AMP-dependent synthetase and ligase TERM 1558 2448411 - 2448396 - G 78 -7.6 -4.38712 | GCCATGGCCAGAAAA TGATCG TCGA CGATCA GGATGCCGGTATCGC Rmet_5828 2449129 - 2449806 + | isochorismatase hydrolase Rmet_5829 2450993 - 2449992 - | periplasmic phosphate binding protein TERM 1559 2450145 - 2450109 - G 93 -14.4 -3.96216 | gap 1 CGCCCACTGAAAGAA CGCCAGCGCATCCTTCG TATT CGACGGGTGCGC-GGCG GAACGCTGCATCAGC Rmet_5830 2452339 - 2451170 - | hypothetical protein Rmet_5831 2452628 - 2453458 + | LuxR family transcriptional regulator Rmet_5832 2453613 - 2454206 + | response regulator receiver domain-containing protein TERM 1560 2454386 - 2454409 + G 86 -13.1 -3.88232 | opp_overlap 2454386 TGTTGCTATGAGATA CGGCTCGCC ATCGTA GGCGGGCCG TTGTTGTATCGGGGA Rmet_5833 2454302 - 2454580 + | hypothetical protein TERM 1561 2454667 - 2454635 - f 81 -4.8 -5.00616 | gap 1, overlap 2454638 CGTCGCGCCAAAAAA GAAGCCCGC-CGACC GGGG GACCATGCGGGCTTT GAAATGGACGCTCGC TERM 1562 2454664 - 2454638 - f 78 -6.5 -4.61482 | gap 1, overlap 2454635 CGCGCCAAAAAAGAA GCCCGC-CGACC GGGG GACCATGCGGGC TTTGAAATGGACGCT TERM 1563 2454697 - 2454672 - f 86 -13.3 -3.53091 | opp_overlap 2454672 ATGCGGGCTTTGAAA TGGACGCTCGC GTGC GCGAACGCCCA TTACTTACGAACATA Rmet_5834 2454934 - 2455614 + | phosphoesterase, PA-phosphatase related Rmet_5835 2455727 - 2457133 + | sugar transferase Rmet_5836 2457259 - 2457510 + | acyl carrier protein Rmet_5837 2457507 - 2458709 + | acyl-CoA dehydrogenase-like protein Rmet_5838 2458721 - 2459686 + | hypothetical protein Rmet_5839 2459687 - 2460670 + | hypothetical protein TERM 1564 2463147 - 2463178 + G 70 -13.7 -2.52464 | overlap 2463134 2463135 CATCCGCCTGATGCA TGACGCTGGCGTC ACCAGC GGCGCCAGCGCCA TCCCTTCGGGCGAAG Rmet_5840 2460667 - 2463237 + | glycoside hydrolase family protein Rmet_5841 2463636 - 2464364 + | Crp/FNR family transcriptional regulator TERM 1565 2464398 - 2464428 + T 100 -20.4 -3.53012 | GGATGGAGCAGGGGA GAGGGCCGCCGCGC CAG GCGTGTCGGCCCTC TTTCACGACAAGGGG Rmet_5842 2465497 - 2464445 - | hypothetical protein Rmet_5843 2465872 - 2467368 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 1566 2468722 - 2468746 + G 72 -13.5 -3.16191 | AATCGGCGTGGGCAC CGCGCCGCTCA CGA TGGGCGGCGGG TTGCTGGGCATCTGC TERM 1567 2469154 - 2469130 - g 74 -10 -3.7282 | gap 1, opp_overlap 2469137 CGAGGGCAGCAACAA GGTGGTGGCCG TGAC CAGCC-CCACC GCAGGGGCGGGCAAG Rmet_5844 2467430 - 2469772 + | lipopolysaccharide biosynthesis Rmet_5845 2469880 - 2471727 + | hypothetical protein Rmet_5846 2471779 - 2473389 + | hypothetical protein Rmet_5847 2474255 - 2473410 - | short-chain dehydrogenase/reductase SDR TERM 1568 2474364 - 2474343 - H 79 -8.7 -4.1899 | gap 1, opp_overlap 2474355 CGACGTCAGGGAAAA CACGCCCCCG CAT CGGGGA-GTG CCTGCACGATATTTG Rmet_5848 2474436 - 2475629 + | hypothetical protein TERM 1569 2475665 - 2475696 + T 100 -23.2 -3.75437 | opp_overlap 2475665, overlap 2475670 AGCGATGAGCGAAAA GACAAGGCCGCTTC CGAA GAAGCGGCCTTGTC TTTCCTGGCGTGGTT TERM 1570 2475696 - 2475665 - T 100 -23.2 -4.21462 | opp_overlap 2475665 2475670 AGCGATGAGCGAAAA GACAAGGCCGCTTC CGAA GAAGCGGCCTTGTC TTTCCTGGCGTGGTT TERM 1571 2475670 - 2475691 + T 95 -15.9 -3.86252 | opp_overlap 2475665, overlap 2475665 TGAGCGAAAAGACAA GGCCGCTTC CGAA GAAGCGGCC TTGTCTTTCCTGGCG Rmet_5849 2477957 - 2475711 - | exopolysaccharide transporter Rmet_5850 2478451 - 2477957 - | protein tyrosine phosphatase TERM 1572 2478380 - 2478355 - G 78 -16.1 -2.70932 | GCGCGCGGCCAAGCA GTGCCGCCGCC ATCG GGCTGCGGCAC CGGTTGCCGATACAC Rmet_5851 2479543 - 2478455 - | polysaccharide export protein Rmet_5852 2479881 - 2480642 + | hypothetical protein TERM 1573 2480664 - 2480693 + T 88 -19.3 -2.62184 | ATCTGACTCGCCCTT GCCGCTGCCCCGG TCAG TCGGGGCAGTGGC TGATATCCGCCACCG Rmet_5853 2481909 - 2480677 - | glycosyl transferase, group 1 Rmet_5854 2483051 - 2481906 - | glycosyl transferase, group 1 Rmet_5855 2483715 - 2483095 - | putative colanic acid biosynthesis acetyltransferase WcaF Rmet_5856 2485120 - 2483858 - | glycosyl transferase TERM 1574 2484808 - 2484773 - G 74 -10.4 -3.78934 | gap 1 GGGGCTGCAGAACAA TGGCGGCTCGACGGTGA ACA CCAC-GTCGGGGCGCCA TGCCACTTGGCGTGC TERM 1575 2485302 - 2485248 - H 78 -13.4 -3.17075 | opp_overlap 2485265 2485266 GTCGCCGGAAGGGAA CGTTCGCCTCCGCACGCACGCGCCAG CGC CTGGCACGGTTGTGCGCGAGCGAACA GAAGCCGATGGGTCA Rmet_5857 2485443 - 2486846 + | hypothetical protein Rmet_5858 2488418 - 2486979 - | hypothetical protein TERM 1576 2487422 - 2487410 - G 82 -6.9 -4.71426 | overlap 2487414 GTGGCACGAAGAAAA GCAGG CTG CCCGC CAGCTGGTGGCCATA Rmet_5859 2489458 - 2488457 - | NAD-dependent epimerase/dehydratase Rmet_5860 2490647 - 2489442 - | GDP-mannose 4,6-dehydratase TERM 1577 2490556 - 2490603 + g 74 -12.7 -3.29144 | gap 2 ATGCCGGTGATCAGT GCCCGGCGCCGGCCATTGGCGCC GCGT GGCGTCGATG-CAT-CGCCGGGC TTGTCGGCCGCGTCG TERM 1578 2490796 - 2490773 - R 100 -18.2 -4.8622 | overlap 2490790 GTGCCCAATGAAAAA GGGCGCCTTC CGAG GAAGGCGCCC GCATGGCAGGGGTCC Rmet_5861 2491756 - 2490827 - | LuxR family transcriptional regulator TERM 1579 2491200 - 2491169 - G 80 -13.7 -3.30441 | GACCATCGGCGACAA CGGGGCAGCCGAC GAACTG ATCGGCTGGCCCG GGCGCAGACTCGTGA TERM 1580 2492303 - 2492290 - R 72 -2.3 -4.78764 | opp_overlap 2492290, overlap 2492279 2492291 GAAACCCATGAAAAA GGGCA TTTA TGCCA TATATCCGGACATCG TERM 1581 2492451 - 2492509 + r 73 -10.3 -3.57144 | gap 1, opp_overlap 2492457 2492458, overlap 2492452 CGAGCCTGATCGGCT GGCAAATCTGGCGTTGGTCGGGGTCA CATGCCCA TG-CCCCGACCAACGCCAGGCTACCG TTTACCGATCGCGCC TERM 1582 2492452 - 2492508 + r 73 -13.8 -2.74144 | gap 1, opp_overlap 2492457 2492458, overlap 2492451 GAGCCTGATCGGCTG GCAAATCTGGCGTTGGTCGGGGTCA CATGCCCA TG-CCCCGACCAACGCCAGGCTACC GTTTACCGATCGCGC TERM 1583 2492503 - 2492457 - R 100 -20.3 -3.53444 | gap 1, opp_overlap 2492452 2492451, overlap 2492458 TGATCGGCTGGCAAA TCTGGCGTTGGTCGGGGTCACA TGCC CATG-CCCCGACCAACGCCAGG CTACCGTTTACCGAT TERM 1584 2492502 - 2492458 - R 100 -23.8 -2.71924 | gap 1, opp_overlap 2492452 2492451, overlap 2492457 GATCGGCTGGCAAAT CTGGCGTTGGTCGGGGTCACA TGCC CATG-CCCCGACCAACGCCAG GCTACCGTTTACCGA Rmet_5862 2492873 - 2492565 - | putative signal peptide protein Rmet_5863 2493825 - 2493292 - | hypothetical protein Rmet_5864 2493824 - 2494267 + | cyanate hydratase Rmet_5865 2494510 - 2494346 - | hypothetical protein TERM 1585 2494795 - 2494809 + H 79 -12.8 -3.54307 | opp_overlap 2494783 ATAGTGGCTGTGGAG CCGCGC CCG GCGCGG TTTGCAACCCATCTT Rmet_5866 2494850 - 2495632 + | phosphoribosyltransferase Rmet_5867 2496155 - 2495643 - | 3-isopropylmalate dehydratase, small subunit TERM 1586 2495990 - 2496015 + g 81 -11.1 -4.08216 | gap 1, overlap 2495990 CGTCGCCGGGTTTGA CC-GCGCCCGGA AAC TCCGGCCGCAGG TTTTCCAGGCAGTGG TERM 1587 2496080 - 2496093 + g 71 -8.1 -4.07568 | opp_overlap 2496063 GGCCCGGCGCCATCG CGTCG GTAT CGACG TTTTCGCCGAAGCGC Rmet_5868 2497474 - 2496152 - | 3-isopropylmalate dehydratase large subunit TERM 1588 2496555 - 2496576 + g 79 -15.1 -3.01791 | TCGATCGGCGCGCCG GCGGCCTGG TCGA CCGGGCCGC TGTTGGCCGGCGAAT Rmet_5869 2498511 - 2497471 - | hypothetical protein Rmet_5870 2499394 - 2498612 - | GntR family transcriptional regulator Rmet_5871 2500094 - 2501575 + | putative glycin-rich signal peptide protein TERM 1589 2501628 - 2501576 - f 81 -14.2 -3.34344 | gap 1, opp_overlap 2501577, overlap 2501577 GCAGTCGGCAAGTAA GTCCTTCGAGCGTCTGTACCGTTCC GCAC GGAACGGTACAG-CACCCGCAGGGT TGAATCGGATGGGGC TERM 1590 2501627 - 2501577 - f 85 -17.7 -2.60392 | gap 1, opp_overlap 2501577, overlap 2501576 CAGTCGGCAAGTAAG TCCTTCGAGCGTCTGTACCGTTCC GCAC GGAACGGTACAG-CACCCGCAGGG TTGAATCGGATGGGG TERM 1591 2501577 - 2501627 + F 83 -15.5 -3.06796 | gap 1, opp_overlap 2501577 2501576 CAGTCGGCAAGTAAG TCCTTCGAGCGTCTGTACCGTTCC GCAC GGAACGGTACAG-CACCCGCAGGG TTGAATCGGATGGGG Rmet_5872 2501768 - 2502229 + | putative signal peptide protein Rmet_5873 2502226 - 2502924 + | peptidase C39, bacteriocin processing TERM 1592 2503849 - 2503816 - g 77 -13 -3.40611 | overlap 2503814 2503817 CGTAGCGCAACAACA GGCCGCGACCGCCG TCGCGG CGGCGGGCACGGTC GTCACCAACGGCCTG TERM 1593 2503836 - 2503817 - g 74 -15 -2.64045 | overlap 2503814 2503816 GTAGCGCAACAACAG GCCGCGAC CGCC GTCGCGGC GGCGGGCACGGTCGT TERM 1594 2504008 - 2503987 - g 86 -15.9 -3.23216 | overlap 2504001 CCTGATGACGATCAA CGCCAGCGT GAAC ACGCTGGCG GCATTCCGCGCGCAA Rmet_5874 2502938 - 2504077 + | hypothetical protein Rmet_5875 2504186 - 2505658 + | hypothetical protein Rmet_5876 2505827 - 2506339 + | putative transmembrane protein Rmet_5877 2506623 - 2507762 + | extracellular ligand-binding receptor Rmet_5878 2507793 - 2508572 + | gluconate 5-dehydrogenase Rmet_5879 2509494 - 2508595 - | LysR family transcriptional regulator Rmet_5880 2509579 - 2510979 + | hypothetical protein Rmet_5881 2510992 - 2511336 + | hypothetical protein Rmet_5882 2511379 - 2512365 + | hypothetical protein TERM 1595 2512415 - 2512384 - f 93 -14.4 -3.91897 | CGCTTCACGCAGAAA CGGGTACGCTTTGC GCTG GCAAGGCGTTCCCG TGACAACTTGCCCCG Rmet_5883 2512485 - 2513234 + | twin-arginine translocation pathway signal Rmet_5884 2513684 - 2513295 - | GCN5-related N-acetyltransferase TERM 1596 2513768 - 2513786 + H 80 -10.2 -4.07687 | overlap 2513755 GCCTTCCGCCACGGG CGCGCGTA TGG TTCGCGCG TTTTGGCGACAGAGT Rmet_5885 2513911 - 2515401 + | AMP nucleosidase TERM 1597 2515466 - 2515446 - T 100 -18.3 -5.63103 | CCTGAACGAAAAAAA GCGCGCGGT ATC ACCGCGCGC CTGGAATCGGAGTGA TERM 1598 2515537 - 2515521 - T 81 -4.3 -4.94902 | overlap 2515512 CAAGGAGGAGAAAAA TCGCCGC TTA GAAGCGA TAGCCGACACCGGCG Rmet_5886 2516265 - 2515528 - | OmpW TERM 1599 2516479 - 2516510 + r 100 -16.6 -4.4009 | overlap 2516480 GAGAGGACGTCTTTC GCGGTGTGCCCTCT GGGG GGAGGGCACACCGG TTTTCTCGGATGCAG TERM 1600 2516480 - 2516509 + r 95 -20.1 -3.23733 | overlap 2516479 AGAGGACGTCTTTCG CGGTGTGCCCTCT GGGG GGAGGGCACACCG GTTTTCTCGGATGCA Rmet_5887 2518244 - 2516541 - | 2-isopropylmalate synthase Rmet_5888 2518769 - 2520154 + | hypothetical protein TERM 1601 2520296 - 2520273 - T 86 -14.6 -3.3506 | gap 1 CTCAAATTGCGACAA GGCG-GCAGGC AGA GCCTGCACGCC CACTCCCCCAACCCC TERM 1602 2520423 - 2520390 - T 86 -13.9 -3.53012 | overlap 2520396 TCGCGTCCCCGCAAA TGAAAACGGCGACCC TTTC AGGTCGCCGTCGTCA GGCATCATCCGTCGA TERM 1603 2520417 - 2520396 - T 100 -13.7 -4.54727 | overlap 2520390 CCCCGCAAATGAAAA CGGCGACCC TTTC AGGTCGCCG TCGTCAGGCATCATC Rmet_5889 2520767 - 2520447 - | putative transmembrane protein Rmet_5890 2522645 - 2520783 - | ferrous iron transport protein B Rmet_5891 2522971 - 2522669 - | hypothetical protein TERM 1604 2523247 - 2523268 + r 100 -15.9 -4.21471 | opp_overlap 2523251 ACGCGTACTTCTCAA GCCACTGGC TTCG GCCAGTGGC TTCTTCTTTTGGCGT Rmet_5892 2524203 - 2523310 - | LysR family transcriptional regulator Rmet_5893 2524347 - 2526143 + | acyl-CoA dehydrogenase-like protein Rmet_5894 2526175 - 2527251 + | hypothetical protein Rmet_5895 2527275 - 2528414 + | L-carnitine dehydratase/bile acid-inducible protein F Rmet_5896 2530189 - 2528489 - | L-lactate transport Rmet_5897 2531693 - 2530248 - | Iron-sulfur cluster binding protein Rmet_5898 2532400 - 2531690 - | hypothetical protein Rmet_5899 2533182 - 2532397 - | protein of unknown function DUF224, cysteine-rich region Rmet_5900 2533320 - 2534018 + | GntR family transcriptional regulator Rmet_5901 2535184 - 2534090 - | hypothetical protein Rmet_5902 2535387 - 2536769 + | ethanolamine ammonia-lyase heavy chain TERM 1605 2537550 - 2537516 - g 100 -25.8 -3.59979 | GGCGTGGACCTGAAA GACGACAGCGCCGCCG TGT CGGCGGCACTGTCGCC CCCCTGAAGACATAA Rmet_5903 2536787 - 2537557 + | ethanolamine ammonia-lyase small subunit Rmet_5904 2538049 - 2537576 - | YbaK/prolyl-tRNA synthetase associated region Rmet_5905 2539037 - 2538084 - | LysR family transcriptional regulator TERM 1606 2538617 - 2538654 + g 78 -14.1 -3.28712 | opp_overlap 2538608, overlap 2538629 AGATGATGCGCAACG CCACTTCCACATCCTCG GAGA CGAGGTTGTGGATGCGG TTGTCAAAGACGACG TERM 1607 2539090 - 2539075 - R 100 -11.8 -5.27335 | opp_overlap 2539075 2539072 2539071 GCGTGCAAATAAAAA GGGGCC CGAA GGCCCC TCAGTTTGCCATGAC Rmet_5906 2540435 - 2539122 - | metabolite TERM 1608 2540333 - 2540319 - G 72 -2.8 -4.64844 | CGCATAGACATAAAA GTCGAA CCA TTCCAC CAGATTGCCGGACGA TERM 1609 2540361 - 2540372 + g 86 -3.6 -5.2166 | CGACGCGGCAACAAT CGCG AAGA TGCG TTTTTTGACTTCTTC Rmet_5907 2540833 - 2541156 + | hypothetical protein TERM 1610 2541311 - 2541332 + G 73 -5.8 -4.37886 | overlap 2541312 CCGAATCCTTTTCCT TGCTGCGC GCTTCG GTGCAGCG TTTTATCGACGATCG TERM 1611 2541488 - 2541518 + G 70 -6.1 -4.2803 | overlap 2541478 CGATGTCGCAGGAAT GCGATGTGGTCTA CGACT TGGGCCACACTGC TTTTGCCTTCCGCTC Rmet_5908 2541283 - 2542440 + | acyl-CoA dehydrogenase-like protein Rmet_5909 2542501 - 2543076 + | hypothetical protein TERM 1612 2543126 - 2543157 + T 80 -10.9 -3.8211 | gap 1 TGCGATTGCGCTGTC GGAT-GCGGCAACG GTGCA CGATGCCGCCATCC TTGTTGTAACTGGGG Rmet_5910 2543606 - 2543235 - | hypothetical protein TERM 1613 2543628 - 2543649 + r 70 -10.3 -3.42078 | opp_overlap 2543628 CTCTAGTCTGAACAA TCACTGTAT AAAT ATACAGTGA TTGTCGTCAGGTCTC TERM 1614 2543649 - 2543628 - R 73 -10.3 -3.63515 | opp_overlap 2543628 CTCTAGTCTGAACAA TCACTGTAT AAAT ATACAGTGA TTGTCGTCAGGTCTC Rmet_5911 2546585 - 2543712 - | peptidase M16-like protein TERM 1615 2543750 - 2543770 + g 82 -16.1 -3.14564 | GGGCGGCTGCCGGCG CGGTGGCGG GTT CCGCCGCCG TTGCTGCCGGGGTGC TERM 1616 2544909 - 2544925 + g 75 -8 -4.27316 | opp_overlap 2544920, overlap 2544915 GAGCATTCCGGCCGT CAGCGA GCCAA TCGCTG TTTTCCCTTGCAGCG Rmet_5912 2546774 - 2548276 + | transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase Rmet_5913 2548273 - 2548821 + | methylated-DNA--protein-cysteine methyltransferase Rmet_5914 2548839 - 2549405 + | 2',5' RNA ligase Rmet_5915 2550152 - 2549538 - | lysine exporter protein LysE/YggA TERM 1617 2550200 - 2550216 + H 80 -3.7 -5.06414 | AAGCCGTGTATTCGA TGGCA CGACATA TGCCA TTTTTATTCGCAGAA Rmet_5916 2550300 - 2551160 + | LysR family transcriptional regulator TERM 1618 2551920 - 2551910 - g 72 -6.8 -4.2349 | TCCCGAGACGGAAAA GCAG GCG CTGC AGCTCGATATTGCTG Rmet_5917 2551407 - 2552201 + | YcgR Rmet_5918 2553156 - 2552260 - | IclR family transcriptional regulator TERM 1619 2553223 - 2553201 - R 95 -6.2 -5.60993 | overlap 2553202 TTCTGGACAAAAAAA TGTCGCCG GTCGGGA CGGCGACG GGGAAGGGGGTGTCG TERM 1620 2553222 - 2553202 - R 73 -9.7 -3.95873 | overlap 2553201 TCTGGACAAAAAAAT GTCGCCG GTCGGGA CGGCGAC GGGGAAGGGGGTGTC Rmet_5919 2555662 - 2553410 - | patatin Rmet_5920 2555737 - 2556123 + | hypothetical protein Rmet_5921 2556120 - 2556953 + | NAD-dependent deacetylase TERM 1621 2557161 - 2557136 - f 78 -13.3 -3.1372 | gap 1, opp_overlap 2557140 2557141 2557160, overlap 2557134 TATCGCTGACGAAGA CGTGCTCGCGCA TCG CGCGCG-GCACG CGCCGGAGCCTGCGT TERM 1622 2557243 - 2557211 - g 79 -10.6 -4.15106 | gap 1, overlap 2557214 TATGAATTCCGAAAA GGACGTCATGGCGGA CGCA TCCGCCATG-CGCAC GTCCATGCACGCGCT TERM 1623 2557240 - 2557214 - g 72 -13.1 -3.09718 | gap 1, overlap 2557211 GAATTCCGAAAAGGA CGTCATGGCGGA CGCA TCCGCCATG-CG CACGTCCATGCACGC TERM 1624 2557269 - 2557279 + G 70 -2.4 -4.59944 | overlap 2557270 GCGCTTGCCGTGTAT GGCG CAA CCCC TTTGTTTGTGCTGCT TERM 1625 2557844 - 2557856 + G 70 -4.7 -4.41633 | overlap 2557835 2557834 GCCGTTCCGGTTCGA GCACG TGC CGGGC TTCTTTTTCCCGCTG Rmet_5922 2557197 - 2558093 + | hypothetical protein Rmet_5923 2558671 - 2558090 - | putative transmembrane protein Rmet_5924 2558966 - 2558763 - | hypothetical protein TERM 1626 2558813 - 2558828 + g 74 -10.4 -3.71848 | ACTCGGCAGCCATGG GTGCGC TGGC GCGCAC TTGTTGGTACAGCGC Rmet_5925 2559486 - 2559058 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1627 2560024 - 2560042 + G 76 -13.8 -3.15999 | opp_overlap 2560004 GGCCGAAGGTATCGC CGCGCTGC AAT GCGGCGCG TTCCATATCTCGACC Rmet_5926 2559776 - 2561101 + | argininosuccinate synthase TERM 1628 2561148 - 2561127 - f 100 -15.9 -4.18018 | opp_overlap 2561127, overlap 2561106 TTTCCGGACGGAAAA GCGGCACGA GCGA TCGTGCCGC TTTTTTTTCGCCGCC TERM 1629 2561127 - 2561148 + F 100 -15.9 -5.75342 | opp_overlap 2561106 2561127 TTTCCGGACGGAAAA GCGGCACGA GCGA TCGTGCCGC TTTTTTTTCGCCGCC Rmet_5927 2561254 - 2562279 + | aldo/keto reductase TERM 1630 2562452 - 2562420 - f 95 -12 -4.66537 | gap 1, opp_overlap 2562425 GGGCGTAATATAAAA GCACGCACGGCCGTC AAAT GACGGCCG-ACTTGC GTGAGGCTATGAGCC Rmet_5928 2562506 - 2565574 + | putative transmembrane protein TERM 1631 2565603 - 2565571 - T 72 -11.2 -3.28712 | opp_overlap 2565570 2565571, overlap 2565575 GCTCCGCTGCGAGAA CTGAGCGATCCCGG CCGTT CCGGGATCGCCGCG GGTTTATGGCGCAGG TERM 1632 2565599 - 2565575 - T 83 -17.2 -2.59431 | opp_overlap 2565571 2565570, overlap 2565571 CGCTGCGAGAACTGA GCGATCCCGG CCGTT CCGGGATCGC CGCGGGTTTATGGCG Rmet_5929 2565879 - 2565628 - | transglycosylase-associated protein Rmet_5930 2568089 - 2565981 - | elongation factor G Rmet_5931 2569092 - 2568193 - | polysaccharide deacetylase Rmet_5932 2569612 - 2569295 - | hypothetical protein Rmet_5933 2569637 - 2570380 + | hypothetical protein Rmet_5934 2571127 - 2570387 - | hypothetical protein Rmet_5935 2571284 - 2572846 + | methyl-accepting chemotaxis sensory transducer Rmet_5936 2573915 - 2572884 - | luciferase-like protein Rmet_5937 2576852 - 2574045 - | hypothetical protein Rmet_5938 2577914 - 2576940 - | rhodanese-like protein TERM 1633 2577884 - 2577867 - G 75 -9.1 -3.95787 | CAGTACATTGAGAAA CACGAGC ATCA GCCCGTG ACCATCGAGCAAGCT Rmet_5939 2578458 - 2578042 - | Hpt domain-containing protein Rmet_5940 2579117 - 2578455 - | two component LuxR family transcriptional regulator TERM 1634 2579299 - 2579267 - R 100 -9.1 -5.626 | gap 1, overlap 2579269 GACGGCACAAAAAAA TCGCGGCCCTCCGC ACTCAA ACGG-GGGCCGCCA ATCGGGAATGCGAGG Rmet_5941 2580080 - 2579403 - | hypothetical protein