TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.309083 %AT, 3911355 nt, 33674 terms. Intergenic: 0.329022 %AT, H2T: 409489 nt, 3618 terms; T2T: 133734 nt, 2492 terms; H2H: 167902 nt, 3149 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|77404592|ref|NC_007488.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence (length 114178) RSP_4039 1733 - 2095 + | hypothetical protein glpR 2641 - 3468 + | DeoR family transcriptional regulator RSP_4037 3642 - 4931 + | ABC sugar transporter, periplasmic lignad binding protein RSP_7366 5076 - 5912 + | ABC sugar transporter, inner membrane subunit RSP_4035 5912 - 6724 + | ABC sugar transporter, inner membrane subunit TERM 1 7738 - 7759 + G 73 -9.3 -3.90112 | GGCGAGATCATCCCC GCCGAGGGC GACC GCCTGCGGC TTTCCTTCACCCCCG RSP_4034 6757 - 7815 + | ABC sugar transporter, ATPase subunit tdh 7843 - 8856 + | Zinc-containing alcohol dehydrogenase RSP_4032 8935 - 10380 + | succinate semialdehyde dehydrogenase RSP_4031 10377 - 11432 + | 3-isopropylmalate dehydrogenase yihT 11462 - 12331 + | tagatose 1,6-diphosphate aldolase yihV 12357 - 13256 + | carbohydrate kinase, PfkB TERM 2 14491 - 14533 + G 76 -16.2 -3.17051 | overlap 14495 GCGGTGCCGCTCGCC CGGACGGGCCTGCAGGAGGT CCT GCCTCCCGCGGTCCTGTTCG TCTTCCTCGTGGGCC RSP_4028 13573 - 14637 + | acyltransferase RSP_4027 14654 - 16588 + | parallel beta-helix repeat-containing protein RSP_7367 17685 - 16621 - | AbrB protein (AidB regulator) fsr 19178 - 17973 - | major facilitator superfamily fosmidomycin resistant protein RSP_4024 19541 - 20317 + | hypothetical protein TERM 3 20477 - 20461 - f 77 -3.6 -4.79373 | overlap 20462 GAAGATAACAGAAAA TGCCGT AACAA ACGGCG GAGAGCGGGATGCAA repA3 20487 - 21665 + | ATPase, ParA type repB1 21662 - 22612 + | ParB-like partition protein TERM 4 22691 - 22663 - f 95 -9.5 -4.93365 | CGGCAGAACGAAAAA GCCCCCCAGGACA TGA CATCCCGAGAGGC CCATTCTTGATCTAG repC2 22769 - 24070 + | replication protein C RSP_4019 26299 - 27303 + | LysR family transcriptional regulator RSP_4018 27710 - 28645 + | diguanylate cyclase RSP_4017 30200 - 28731 - | GntR family transcriptional regulator dctP 30256 - 31311 + | TRAP dicarboxylate family transporter DctP subunit TERM 5 31413 - 31427 + G 74 -7.8 -4.26076 | AAAGCCATGTCTGCC GGGTGA TCC TCGCCC TTTTCGTCACGCTGC dctQ 31364 - 31924 + | TRAP dicarboxylate family transporter DctQ subunit RSP_4014 31924 - 33264 + | TRAP-T family transporter large inner membrane subunit DctM RSP_4013 33282 - 33677 + | hypothetical protein tauD 33684 - 35072 + | FAD dependent oxidoreductase ilvB2 35085 - 36866 + | sulfoacetaldehyde acetyltransferase TERM 6 36909 - 36941 + F 70 -12.5 -3.30159 | overlap 36906 GCCCCTCTGCGACCC GCCCGACTGTCCGGC GCT GCCTGCCGGGCGGGC TTCTCCGGGCCTTCC TERM 7 37078 - 37103 + F 89 -18.3 -3.29144 | overlap 37097 GCGCGGCCGTTGCCC GCCTGTCCGGC TGCC GCCGGGCAGGC TTCTCCGGCCCCTGC RSP_4010 37146 - 38165 + | hypothetical protein TERM 8 38579 - 38591 + G 71 -9.1 -4.12254 | overlap 38557 GGCCGAGGGCGCGCC GCTCG TCT CGAGC TTCTTTCTCATGCTC pta 38175 - 39173 + | phosphotransacetylase TERM 9 39158 - 39186 + F 82 -5.7 -4.72986 | overlap 39159 39161 39178 CGCGCCCGAGGGGCT GGCCGCGGCGCGC TAG GCAGGCCGCGTCG TTTTTGATGCGGATC RSP_4008 39276 - 40829 + | trimethylamine methyltransferase MttB-like protein TERM 10 40839 - 40859 + F 100 -13.9 -4.8622 | overlap 40840 TACTGATCTCCCCCC TGGCCGCCG ATC CGGCGGCCC TTTTTCCTTCGCGAG TERM 11 40840 - 40858 + F 90 -17.4 -3.5125 | overlap 40839 ACTGATCTCCCCCCT GGCCGCCG ATC CGGCGGCC CTTTTTCCTTCGCGA RSP_4007 40884 - 41990 + | mandelate racemase/muconate lactonizing protein RSP_4006 41999 - 42733 + | Short-chain dehydrogenase/reductase SDR RSP_4004 42730 - 43509 + | Short-chain dehydrogenase/reductase SDR RSP_4005 44810 - 43470 - | oxidoreductase, NAD-binding site dhaL 46303 - 44807 - | aldehyde dehydrogenase RSP_4002 47210 - 46305 - | dihydrodipicolinate synthetase RSP_7368 47980 - 47228 - | GntR family transcriptional regulator proV 48080 - 49168 + | glycine betaine/L-proline ABC transporter ATPase proW 49168 - 50109 + | glycine betaine/L-proline ABC transporter inner membrane protein proX 50145 - 51131 + | glycine betaine transporter periplasmic subunit RSP_3997 51181 - 52131 + | transcriptional regulator RSP_3995 52324 - 52887 + | hypothetical protein RSP_3994 53413 - 53078 - | hypothetical protein RSP_3993 56839 - 53501 - | hemolysin-type calcium-binding protein RSP_3992 57058 - 57738 + | hypothetical protein TERM 12 57824 - 57790 - f 100 -13 -4.71426 | opp_overlap 57774 57789 57788 TGTGCATCAAGAAAA TTCCCGCTGCACAC TTGCTCG ATGTGCAGCGGAAA GATATTTGATGCACA RSP_3991 57879 - 58898 + | hypothetical protein TERM 13 58909 - 58938 + T 70 -14.9 -2.78384 | opp_overlap 58905 GCTGAGAGAGACCGC TCCCGCGCCGGGC CTAT GCCTGCCGCGGGG TCTCGTGCGGGAGGA RSP_3990 60320 - 59130 - | Poly (3-hydroxybutyrate ) depolymerase RSP_7172 60761 - 60354 - | hypothetical protein RSP_3989 62156 - 61158 - | NAD-dependent epimerase/dehydratase TERM 14 62409 - 62383 - g 74 -8.1 -4.1822 | gap 1, opp_overlap 62379 62376 62383 GGCGATTCGAATAAA GATTTCCTTGCC AACT GGCA-GGAAACC TTCGTTCTCTTTGCC RSP_7124 62278 - 62826 + | hypothetical protein TERM 15 63417 - 63438 + G 83 -3.7 -5.03994 | overlap 63410 GATCTTGTGATTTCG GAAAATCCT TTTG GGGATATTC TTTTTCTCTCTCAAG RSP_3988 62823 - 65204 + | glycosyltransferase RSP_3986 65293 - 66294 + | hypothetical protein TERM 16 66534 - 66503 - f 73 -15.8 -2.62184 | opp_overlap 66498 CCGCCCTCCACAGGA CGGGCGCCCGGC CTGCCGCC GCCGCGCGCCCG GACCGTCTCTGACAG RSP_3985 66565 - 68031 + | hypothetical protein TERM 17 68207 - 68151 - f 100 -30.9 -3.48276 | overlap 68152 CCCGCTGCCATACAA CCTGCGGCCTGTGCGCCGCTGCGGCGG ATC CCGCGGCAGCGGCGCACAGGCCTGAAA ATAGTGCTCAAGGAC TERM 18 68206 - 68152 - f 100 -32.2 -2.68823 | overlap 68151 CCGCTGCCATACAAC CTGCGGCCTGTGCGCCGCTGCGGCGG ATC CCGCGGCAGCGGCGCACAGGCCTGAA AATAGTGCTCAAGGA kaiC2 68311 - 70023 + | circadian clock protein KaiC kaiB2 70026 - 70295 + | circadian clock KaiB-like protein RSP_3982 70301 - 71737 + | hypothetical protein RSP_3981 72011 - 71745 - | hypothetical protein RSP_3980 72508 - 72059 - | universal stress protein TERM 19 72622 - 72606 - R 71 -10.8 -3.6052 | opp_overlap 72606 72613, overlap 72600 72596 72607 GAAAATCAAGGAGAA GCCGCG CGGCC CGCGGC CTTTGCCCCGCCGTG RSP_3979 73810 - 72749 - | ferredoxin RSP_3978 75046 - 73814 - | ring hydroxylating dioxygenase, alpha subunit RSP_3977 75213 - 76136 + | LysR family transcriptional regulator RSP_7166 76712 - 76416 - | hypothetical protein RSP_7369 76848 - 77507 + | two component transcriptional regulator RSP_3975 77510 - 78826 + | periplasmic sensor signal transduction histidine kinase RSP_3974 79001 - 81367 + | transketolase RSP_3973 81846 - 81382 - | AsnC family transcriptional regulator fabG 82651 - 81860 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 20 82670 - 82724 + r 72 -14.1 -3.16564 | gap 2, overlap 82673 TCAGCTCTCGCTCGG TTCGGCC-CGGCGCCGGCCGC-GCCGC GGC GTGGCGGCGGCCGGAGGCGTGGCCTCG TTGATGACATCCACG TERM 21 82673 - 82721 + r 87 -22.4 -2.78547 | gap 2, overlap 82670 GCTCTCGCTCGGTTC GGCC-CGGCGCCGGCCGC-GCCGC GGC GTGGCGGCGGCCGGAGGCGTGGCC TCGTTGATGACATCC RSP_3971 83401 - 82655 - | GntR family transcriptional regulator TERM 22 83476 - 83494 + H 70 -3.8 -4.4078 | opp_overlap 83480, overlap 83478 TTCCCGTGTCGCAAA TTGAGATC ACA GATCACGA TTTTGGTTGACCCAC RSP_3970 83574 - 84509 + | 3-hydroxyacyl-CoA dehydrogenase RSP_3969 84519 - 85451 + | hypothetical protein TERM 23 85721 - 85702 - g 70 -10 -3.78034 | gap 1 CATGCAGATCAACAA GGCCGGAGG CCT CCTC-GGCC GCGAGGTCGAGCTCG RSP_3968 85514 - 86767 + | ABC branched chain amino acid transporter, periplasmic ligand binding protein RSP_3967 86764 - 87645 + | ABC branched chain amino acid transporter, inner membrane subunit RSP_3966 87645 - 88658 + | ABC branched chain amino acid transporter, inner membrane subunit RSP_3965 88655 - 89437 + | ABC branched chain amino acid transporter, ATPase subunit RSP_3964 89424 - 90131 + | ABC branched chain amino acid transporter, ATPase subunit RSP_3963 90154 - 90909 + | Short-chain dehydrogenase/reductase SDR pcaD 90920 - 91720 + | 3-oxoadipate enol-lactonase TERM 24 91736 - 91764 + T 95 -17.4 -3.76224 | overlap 91737 GATCCTGCCGCGCAA GGGCCCGGACCC CGCGA GGGTCCGGGCCA TTTCGTCAATGGAAG TERM 25 91737 - 91763 + T 87 -20.9 -2.8552 | overlap 91736 ATCCTGCCGCGCAAG GGCCCGGACCC CGCGA GGGTCCGGGCC ATTTCGTCAATGGAA RSP_7370 92513 - 91770 - | short-chain alcohol dehydrogenase RSP_3959 92579 - 94861 + | hypothetical protein RSP_7371 94858 - 95622 + | short-chain alcohol dehydrogenase TERM 26 95879 - 95889 + G 82 -4.6 -4.82901 | CGCATCATCAGGACC TCGC GGG GCGG TTTTTCTCGGCCGAG RSP_3957 95632 - 96159 + | flavoprotein oxidoreductase TERM 27 96183 - 96223 + T 79 -18.5 -2.67694 | opp_overlap 96148, overlap 96185 96188 96197 CGCGCCGGCGAGGGC CAGAGCGCCGCGA-AGCCC CACCC GGGCTTTCGCGGC-CTCTG TCATCTGCTGATCCT TERM 28 96185 - 96221 + T 72 -15.3 -2.87944 | opp_overlap 96148, overlap 96183 96188 96197 CGCCGGCGAGGGCCA GAGCGCCGCGA-AGCCC CACCC GGGCTTTCGCGGC-CTC TGTCATCTGCTGATC TERM 29 96278 - 96313 + T 78 -16.8 -3.07816 | gap 1, overlap 96310 GATCCGGCCCCGACT GCGGGATCCGGCGGCCC ATC GGGCCGCCGGAGG-CGC TTGGCTCAGTAGGCC RSP_3956 97332 - 96319 - | sugar isomerase (SIS) RSP_3955 98924 - 97425 - | argininosuccinate lyase RSP_3954 99151 - 98921 - | hypothetical protein gtpD 99885 - 99154 - | ABC amino acid transporter, inner membrane subunit gtpC 100558 - 99890 - | ABC amino acid transporter, inner membrane subunit TERM 30 100614 - 100585 - R 74 -14.9 -3.05384 | opp_overlap 100595 TCCGGCGGGAGGGAA GGGCCGGGAGGCG CGGA CGCCTCCCGGAGC GGGCTCAGATCTGCG gtpB 101461 - 100619 - | ABC amino acid transporter, periplasmic ligand binding protein aapP 102279 - 101527 - | AABC amino acid transporter, ATPase subunit TERM 31 103407 - 103428 + G 73 -14.4 -3.41051 | opp_overlap 103369 CTGCCCGCGGGCCGC GCCGCGCC GGTGAA GGCGCGGC TTCTGCTGCAACTCG ansB 102498 - 103496 + | asparaginase/glutaminase RSP_3947 103518 - 104243 + | GntR family transcriptional regulator RSP_3948 105345 - 104224 - | ABC sugar transporter, ATPase subunit RSP_3946 106816 - 105404 - | hypothetical protein RSP_3945 107675 - 106818 - | carbohydrate kinase, PfkB TERM 32 107282 - 107253 - G 95 -17.1 -4.20531 | GACATCGACCGAAAA GCGCGCGCCGTCG CGGA CGAGGGCGCGCAC CAGTTCGGGTGCGCT frlC 108529 - 107672 - | AP endonuclease yurM 109371 - 108526 - | ABC sugar transporter, inner membrane subunit yurN 110333 - 109368 - | ABC sugar transporter, inner membrane subunit TERM 33 110279 - 110307 + g 87 -15.9 -3.63627 | opp_overlap 110246 CCCTCCCTGCCCCGT GGGCGGGGCCGCT GAG GGCGACCCCGCTC TTTCCGATGTCCGCG yurO 111643 - 110333 - | ABC sugar transporter, periplasmic ligand binding protein RSP_3940 112627 - 111689 - | hypothetical protein TERM 34 112009 - 111957 - G 74 -10.1 -4.15044 | gap 5 GTGCCGTGGAAGAAA TCGGCGGCATGGA-C-CGGGC-GCGC GGGCAG GCGCAGCCCGCGCTCCA-G-CGCCGA CAGCGCGAAGCGGTG TERM 35 112694 - 112656 - R 89 -5.8 -5.09895 | overlap 112657 CAGCGAGGCAAAAAA GGATCGGTCCGGCCGCCG CAG CGACTGAGAGACCGATCT CATACTCATACTGCA RSP_3939 113820 - 112756 - | LacI family transcription regulator TERM 36 113714 - 113755 + g 79 -17.9 -2.72344 | gap 1, opp_overlap 113695 TAGCCGTTCAGCGCC CG-CGCCGCCGTCGCCCGGG ACA CCTGCGCGGCCGCGGCGACG TCCTTGACCGTCACC SEQUENCE gi|77404693|ref|NC_007489.1| Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence (length 105284) RSP_4051 2476 - 2976 + | hypothetical protein noeK 4455 - 3046 - | phosphoglucomutase/phosphomannomutase xanB 5884 - 4457 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 1 6121 - 6083 - R 73 -7.3 -4.17089 | opp_overlap 6097 6097, overlap 6086 TCGAAATCCGTAAAA TCAGTGACCCCC-GGCCGC TCG GCGGTCAGGGGGGC-CGGA GAGACTGCGCCGCCC RSP_4054 7601 - 6369 - | aldo/keto reductase TERM 2 7561 - 7581 + g 82 -12.5 -4.09628 | overlap 7562 AGGGCCAGGAACGCT GCCGGGAGG AGC CCTCCCGGG TTGTTCTTTCCGATG TERM 3 7562 - 7580 + g 75 -16 -3.05054 | overlap 7561 GGGCCAGGAACGCTG CCGGGAGG AGC CCTCCCGG GTTGTTCTTTCCGAT RSP_7372 8155 - 8469 + | H-NS family DNA-binding protein TERM 4 9129 - 9116 - g 80 -3.8 -4.8384 | CAAAGAACTGAAAAA CCTG CAGACC CAGG TTGCCAAGGCGATCT spb 9069 - 9386 + | histone-like nucleoid-structuring protein H-NS TERM 5 9394 - 9428 + T 85 -18.7 -3.01712 | gap 1, opp_overlap 9364 9362 9387, overlap 9352 AGATATGACGGCCCC CGGAGGTTCTCCGGCA GTTT TGCCGGGGAACC-CCG TATTACCGGGCCGGG TERM 6 9610 - 9589 - T 70 -8.7 -3.87869 | gap 1, opp_overlap 9589, overlap 9561 GCAACCCGGGACAAA GCGGT-GGCC TGC GACCGACCGC TCGGACTGGCCCCCC RSP_7254 10177 - 9659 - | hypothetical protein TERM 7 9728 - 9757 + g 79 -12.9 -3.86822 | gap 1, overlap 9723 GACGTAGCAGGCATC CTCGCGAGGCGGGC GCT GCTTGCCT-GCGAG TTTCTGCAGGACTTC TERM 8 10142 - 10130 - G 73 -10.5 -3.86252 | opp_overlap 10138 10139, overlap 10138 10139 CCCCACCAAACAGAA GGCGG AAA CCGCC AGAAGGTGGCGCTTT TERM 9 10675 - 10688 + G 84 -6.7 -4.89477 | opp_overlap 10668 ACACCAAAGAGCATG CCTTC GCTC GAAGG TTTTCTTGTTCGGAG efu-2 10616 - 11194 + | translation initiation factor 2 GTPase RSP_4057 12100 - 11594 - | hypothetical protein TERM 10 11821 - 11838 + g 72 -5.5 -4.46073 | overlap 11822 TCGAGGGCACGTCAA CTTGGCG TTCA CGCCAAC TTTCTTGTCTTGGAC hipA 12163 - 13518 + | hypothetical protein blrA 13749 - 14153 + | blue-light receptor BLUF domain-containing protein TERM 11 14224 - 14200 - f 77 -11.4 -3.84451 | gap 1, opp_overlap 14200 14199, overlap 14201 TCCTTGAAATCCAAA CGGGCCGGGAG CTTC CCCCCGGCC-G CAGCTTTCCGAGCTT TERM 12 14862 - 14844 - f 100 -5.9 -5.64274 | overlap 14845 CCATTGATAAAAAAA TCTGCGG CCGCC CCGCAGG TGAAAGAAAGGGCTC TERM 13 14861 - 14845 - f 72 -9.4 -3.9748 | overlap 14844 CATTGATAAAAAAAT CTGCGG CCGCC CCGCAG GTGAAAGAAAGGGCT RSP_4062 15136 - 15645 + | hypothetical protein TERM 14 16430 - 16383 - g 72 -12.7 -3.54741 | gap 1, overlap 16366 CATGAGGCCCTGAAA GCCGAAGGCTTCCAGCGCGGCC TCGAC GGCGGCGATGAAA-CCGTCGGC GTCTCCCTGTCCGTG RSP_4063 15762 - 17840 + | hypothetical protein RSP_4064 17858 - 18229 + | hypothetical protein RSP_7252 18833 - 18360 - | hypothetical protein TERM 15 19089 - 19117 + H 71 -10.2 -3.72576 | opp_overlap 19073, overlap 19090 GCGCGCGACCGCGCG ACGGAGTGCCTC CGGCT GAGGCACCCCGC TTTCCTCCCAGACCG RSP_4065 19452 - 20072 + | hypothetical protein RSP_4066 21032 - 20088 - | hypothetical protein RSP_7190 21115 - 21852 + | hypothetical protein RSP_7191 21897 - 22943 + | hypothetical protein RSP_4067 23211 - 23603 + | hypothetical protein RSP_4068 23611 - 24192 + | hypothetical protein RSP_4069 24208 - 25656 + | caspase-1, p20 RSP_4070 26071 - 26421 + | putative signal peptide protein RSP_4071 27608 - 26520 - | hypothetical protein RSP_4072 28492 - 27605 - | viral aspartic protease RSP_4073 29480 - 29055 - | XRE family transcriptional regulator RSP_4074 29768 - 30193 + | hypothetical protein RSP_7197 30331 - 31239 + | hypothetical protein mvpT 31628 - 31858 + | plasmid maintenance protein MvpT mvpA 31858 - 32265 + | plamid maintenance protein RSP_4078 32742 - 35378 + | H+ transporting ATPase, proton pump TERM 16 35616 - 35642 + T 93 -16.7 -3.85698 | CGGCGGCCCGAGGGG CAGGAGTCTCG CTAGC CGAGACTCCTG TTTCTCAGGGAGGGG RSP_4080 37580 - 35883 - | TPR repeat-containing SPINDLY family protein TERM 17 38003 - 37986 - g 74 -4.8 -4.52857 | ACGTTGCAGAGAAAA TCCGGG AACCTG CCCAGA TCAACGCCGTGGCGT RSP_4081 37901 - 38356 + | hypothetical protein RSP_4082 38353 - 39060 + | hypothetical protein TERM 18 39184 - 39155 - T 74 -11.3 -3.74693 | gap 1, opp_overlap 39179 GCTCATGTCATGAAA CCGGTCGC-CGCCG AAC CGTCGCGCGGCCGG GCTGGGCGACCCAGC TERM 19 39184 - 39210 + T 72 -3.6 -4.63527 | overlap 39179 ACCGTCGCGCGGCCG GGCTGGGCGA CCCAGCA TCACCCATCC TTTTTCCGATAATGG TERM 20 39971 - 39961 - T 75 -8.2 -4.22652 | GGATACGACGCAAAA GCGC AAC GCGC CTCAGACAATCCGGA TERM 21 40349 - 40383 + T 78 -10.6 -4.19238 | GCGCACCTCCTGACA GGCCTGTGACGGCGCT CCC GGTGCGGCTACAGGCC TTTTCGCCTTGGCGC RSP_7246 41439 - 40375 - | acyltransferase RSP_7203 41895 - 42329 + | hypothetical protein RSP_4084 44993 - 42792 - | acetyltransferase RSP_4085 45439 - 44990 - | low molecular weight phosphotyrosine protein phosphatase RSP_4086 46525 - 45443 - | polysaccharide export protein RSP_7375 48521 - 47967 - | putative colanic acid biosynthesis acetyltransferase WcaF RSP_4093 51238 - 50102 - | glycosyl transferase, group 1 TERM 22 50698 - 50665 - G 87 -3.6 -5.12172 | opp_overlap 50694 GACTAAGAAACAAAA GGCGGCGCATGCCC GGACGA GGATTCGAGCCGCC TTGTAAAGGTGGTAT RSP_7376 52625 - 51336 - | hypothetical protein RSP_7377 53214 - 52627 - | acetyltransferase, putative TERM 23 53112 - 53123 + g 82 -4.4 -4.86731 | overlap 53101 CTATGCCTGTTGCAA GTAG GCTT CTAC TTTTATTTAAAACGG RSP_7378 54514 - 53315 - | capsular polysaccharide biosynthesis protein, putative RSP_7379 55299 - 54571 - | SAM-dependent methyltransferase TERM 24 57486 - 57461 - R 100 -21.9 -3.66356 | opp_overlap 57455 AGTTCCAATTTGAAA CGGCGGCGCAG GTGC CTGCGCCGCCG GGTGAGTGTGGTTCG RSP_4102 57875 - 57522 - | glycoside hydrolase family protein TERM 25 57923 - 57952 + r 82 -3.3 -5.07567 | opp_overlap 57905 57940, overlap 57925 GGAACCTCGGTTCGC TGCGGCGCGGGCG GAAA CGGCCGGGCAGAA TTTTTTCACCTCTCA RSP_4103 59379 - 57958 - | hypothetical protein TERM 26 59980 - 60014 + G 70 -9.3 -3.85165 | gap 2 CCCCGGCGTCGGACT GGCGCCAGACGCTCGCC GTC GGTGA-CGTC-GTCGCC TTTCGGTTTCCGGTC RSP_4104 59916 - 60491 + | hypothetical protein TERM 27 60667 - 60685 + G 72 -11.6 -3.63991 | opp_overlap 60646 60645 CGACGGGATCGCCGC GGCCCGCG ACG CGCTGGCC TTGTTGCCGCTGCTG RSP_4105 60548 - 60982 + | hypothetical protein TERM 28 61058 - 61024 - f 91 -2 -5.40474 | opp_overlap 61025 61035, overlap 61025 61026 ACCCCCGGAAAAAAA TCTCGCCGCGTG TTTCCGCCCCG CGCGCGGCGAAC TCACTTCCAGATCCG RSP_4106 61354 - 62016 + | hypothetical protein TERM 29 62240 - 62276 + G 81 -8.5 -4.56597 | overlap 62241 62242 GGCGCTCTGCCGCGA GACGGCGGCGAACCTGA ACT TCGAGATCGCCGCCGAA TTTTTCGACGCGGCG TERM 30 63032 - 63018 - g 78 -11.4 -3.96291 | GAGAAAGCGTACAAA CTGCGC GTG GCGCAG AAGCGGCAGCTGAAC TERM 31 63520 - 63500 - g 83 -3.1 -5.00884 | overlap 63466 63501 AGCGCCCGCAAAAAA CCGTCAGCC GCC GTCTGCCGA GGAACTCGTGGCCGC RSP_4107 62031 - 63725 + | site-specific recombinase wcaG 64904 - 63942 - | putative nucleotide di-P-sugar epimerase or dehydratase gmd 66029 - 64908 - | NAD-dependent epimerase/dehydratase wbyL 66787 - 66026 - | glycosyl transferase family protein RSP_7380 68509 - 68117 - | nucleic acid-binding protein TERM 32 69541 - 69576 + r 75 -4.6 -4.58395 | gap 1, overlap 69536 69535 ACCCGCCCTTGGTCC GACCGGTCAGACGCCCG CGC TGGTCGTCGGACCC-TC TTTTTCGCCCGTAGG TERM 33 70271 - 70253 - R 72 -8.8 -4.07687 | overlap 70258 AGTGTGCCGCGAAAA CACGAGCC ATG GGTTCGTG CATGGCGCACCAGCC RSP_2484 71047 - 70337 - | hypothetical protein TERM 34 70616 - 70596 - G 74 -4 -4.57341 | overlap 70598 AAGCCGCTCGAAAAA TCCACATG GACCA CATGTGCA TCCGGGCATGGCGGT TERM 35 71091 - 71115 + H 89 -4.1 -5.26316 | overlap 71092 71111 AACCGCCGATTCCTG TGAGAGGCAGT GTG GCAGCCTCCCG TTTTTTGTCAAATGG repA 71408 - 72715 + | RepA partitioning protein/ATPase, ParA type TERM 36 72910 - 72873 - g 71 -6.8 -4.1899 | gap 1, opp_overlap 72867, overlap 72874 GCAGCGGAGGCAAAA TGCCGC-CGATGCGCGG GAGTT CCGCGCCGCGCGCGACG AGGGCAGGGTGCTCG repB 72715 - 73767 + | RepB partitioning protein/ParB-like protein TERM 37 73775 - 73818 + T 100 -23.4 -3.59262 | opp_overlap 73764, overlap 73771 AGGAGTGAGGCGGCG CAGTTACCGGTCGGTAACTG CGGC TGGTTACCGGCCGGTAACTG TTTCACGCTGTCAGG RSP_2482 75060 - 74176 - | TonB-dependent receptor protein RSP_7212 75572 - 76366 + | Heme oxygenase TERM 38 78177 - 78191 + G 72 -5.6 -4.38273 | GATCTGGTGGTTCGG CTCGGC GGT GACGAG TTTGTTGTGCTCTGT bhpP 76434 - 79229 + | diguanylate cyclase/phosphodiesterase with phytochrome (GAF) sensor RSP_4112 79574 - 79807 + | hypothetical protein napE 79818 - 80000 + | NapE component of periplasmic nitrate reductase napF 80006 - 80488 + | periplasmic nitrate reductase maturation protein NapF napD 80481 - 80747 + | NapD napA 80744 - 83239 + | nitrate reductase napB 83242 - 83706 + | periplasmic nitrate reductase subunit NapB napC 83708 - 84391 + | periplasmic nitrate reductase subunit NapC RSP_4119 84993 - 84532 - | hypothetical protein yapH 86430 - 85057 - | hypothetical protein TERM 39 86415 - 86473 + g 81 -2.5 -4.9218 | gap 2, overlap 86409 86406 86417 CCACATGAGGCTGCC CA-GTAGCGTCTTTCATTGC-TCGACC TCTGAAT GGTGGACGCAGAGAGGGACGCCACCTG TTTTTATAATGGCTC TERM 40 86599 - 86619 + r 71 -2.4 -4.62471 | AACTTTTGATGATAC GGTCCGCG TGAAT CCCGCACC TTTTTAAAAATTCCG RSP_4121 87844 - 87038 - | hypothetical protein RSP_4122 88117 - 90816 + | hypothetical protein RSP_4124 92368 - 93411 + | hypothetical protein RSP_4125 94307 - 93528 - | hypothetical protein RSP_4127 95448 - 96629 + | ATP dependent lon ATPase TERM 41 96743 - 96763 + F 78 -6 -4.56775 | overlap 96745 GTATGAGGCCGGCAA GCCGCTGC GAAAG GCGGCGAC TTTTTCCAGCCAGCT TERM 42 99309 - 99321 + F 72 -4.1 -4.66537 | overlap 99310 TGGATGGTGAAAGTA TCATG AAA CATGG TTTTCTCTTCGGAGC omp31-1 99311 - 100063 + | putative outer membrane protein RSP_4130 100622 - 100068 - | hypothetical protein TERM 43 100847 - 100814 - H 90 -7.3 -5.0538 | gap 1, overlap 100816 GCGCAGCCCAAAAAA TGGGCGCAACCGCAGC TTT GCAGGGG-TGCGCCGA ATGCCAAACGGCCAG TERM 44 101079 - 101053 - H 88 -11.5 -4.41494 | opp_overlap 101051, overlap 101040 101054 GACGTCCAATGAAAA GGACGCCCGGC CGATC ACCGGGCGTCA AATCTGTCATGAAAC TERM 45 101078 - 101054 - H 77 -15 -3.24414 | opp_overlap 101051, overlap 101040 101053 ACGTCCAATGAAAAG GACGCCCGGC CGATC ACCGGGCGTC AAATCTGTCATGAAA flcA 101538 - 102200 + | two component LuxR family transcriptional regulator RSP_4132 102679 - 102413 - | hypothetical protein RSP_4133 103435 - 102713 - | two component LuxR family transcriptional regulator RSP_7381 104285 - 103644 - | DNA-binding HTH domain-containing proteins RSP_7382 104650 - 105135 + | hypothetical protein SEQUENCE gi|77404776|ref|NC_007490.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence (length 100828) RSP_4138 436 - 1011 + | hypothetical protein parA 3166 - 3891 + | partition parA like-protein TERM 1 4894 - 4925 + F 84 -10 -4.43272 | AACATGCAACCGTCT CGGGGCGCTGTGGT TTCC ACTCCGGCGCGCCG TTTTCGATTTTCGGT TERM 2 5190 - 5217 + F 100 -17.8 -3.89354 | gap 1 GAGCTGACGTTAGAT GGAG-GGGAGCCG ATG CGGCTCCCACTCC TTCTTCATTTCAGAG TERM 3 5599 - 5638 + F 72 -6.8 -4.36914 | opp_overlap 5598, overlap 5600 5601 GTGACGGGGAAAATT GGGGGGCACCCGCGCGGG CTCG CCCGCGTGGGGGAGCCGA TTTTCTCCGGCGCCG TERM 4 5760 - 5734 - f 91 -11.5 -4.60487 | gap 1, overlap 5735 5736 CAGCACCTGCAAAAA GTGTCGCGCCGC TCCC GCGGCGCGTC-C GTGCCAACTCGATCC TERM 5 6679 - 6636 - f 100 -29 -3.04144 | gap 1 GCTCCACCCGTAACA GC-GCAATCGCCAGCCCGGCG GGA CGCCGGGCTGGCGATAGCCGC CCTGCGACGATGCTC TERM 6 6794 - 6804 + F 91 -8.2 -5.00616 | overlap 6777 GCGGTCCGGACCGCC GGCG GCA CGCC TTTTTTGCAGCGCCG RSP_4144 7210 - 7881 + | hypothetical protein RSP_7383 8156 - 8569 + | hypothetical protein TERM 7 8763 - 8812 + G 70 -12.7 -3.28712 | gap 1, overlap 8764 CCCCCGCGTTCGCCA CGC-GGCAGACCGGCATGGGCGCG CGT CGCGACCATGCCGATCAGCCAGAA TTGTGGAGAGCCCGC TERM 8 8764 - 8811 + G 71 -16.2 -2.57132 | gap 1, overlap 8763 CCCCGCGTTCGCCAC GC-GGCAGACCGGCATGGGCGCG CGT CGCGACCATGCCGATCAGCCAGA ATTGTGGAGAGCCCG TERM 9 8867 - 8850 - g 70 -4.1 -4.43189 | gap 1, overlap 8851 ACGAACTGCAGAAAA GGTCAGTC GTG GACCG-CC TCCGGGCAGTGCGCC RSP_7384 8711 - 9229 + | hypothetical protein RSP_4148 10957 - 9512 - | N6 adenine-specific DNA methyltransferase, N12 class RSP_4149 11403 - 11008 - | hypothetical protein TERM 10 11584 - 11625 + H 76 -7.7 -4.36914 | opp_overlap 11583 11584, overlap 11601 GGTGACGGGGAAAAT TGGGGGGCACCCGCGCGGG CTCG CCCGCGTGGGGGGAGCCGA TTTTCTCCGGCGCCG TERM 11 11747 - 11721 - H 91 -11.5 -4.60487 | gap 1, opp_overlap 11725, overlap 11722 11723 CAGCACCTGCAAAAA GTGTCGCGCCGC CCGC GCGGCGCGTC-C TTGCCAACTCGATCC TERM 12 11725 - 11744 + G 72 -16.4 -2.71731 | opp_overlap 11723 11721 11722 ACCTGCAAAAAGTGT CGCGCCGC CCGC GCGGCGCG TCCTTGCCAACTCGA TERM 13 12363 - 12339 - g 70 -4.2 -4.41348 | gap 1, overlap 12340 CGCCCGGCAAAGAAA TGGGC-GCCGA GGCC CCGGAAGCCCA AAACCACCAGCAGGC RSP_4150 11721 - 12386 + | hypothetical protein RSP_4151 12450 - 12770 + | posible transposase RSP_7385 13503 - 12853 - | putative threonine efflux protein RSP_4153 14601 - 13510 - | hypothetical protein RSP_4154 15538 - 15008 - | putative transposase TERM 14 15458 - 15507 + g 75 -15 -3.30159 | gap 3, opp_overlap 15453, overlap 15482 15486 15493 15495 CGGGATCGAACTCGC GGCGCTCGCGCGGCGTGTCGGGCGG CAC CCG-CGGACG-GCGGCGCG-GCGCC TTCTCCGGGGCTTCG RSP_4156 16175 - 15885 - | transposase, IS66 Orf2 RSP_4157 16517 - 17587 + | radical SAM superfamily protein RSP_4158 17721 - 18647 + | Generic methyltransferase RSP_4159 18722 - 19732 + | isopropylmalate/homocitrate synthase RSP_4160 19807 - 20175 + | hypothetical protein RSP_4161 20168 - 21490 + | O-acetylhomoserine sulfhydrylase RSP_4162 21526 - 22302 + | hypothetical protein RSP_7386 22311 - 24074 + | asparagine synthase (glutamine-hydrolyzing) RSP_4165 25907 - 24336 - | transposase IS66 RSP_4166 26329 - 25976 - | transposase IS66 RSP_4167 26748 - 26326 - | IS3 family transposase RSP_4171 28133 - 28960 + | hypothetical protein RSP_4172 29380 - 29003 - | hypothetical protein TERM 15 29277 - 29315 + g 76 -8.2 -4.25104 | gap 1, overlap 29277 TCGGCCCGGTAGTCC GG-CATGGCAGCAACGG CCGAGA CCATTGCTGCCATAACC TTTTCATACGCGCCC RSP_4178 31798 - 32106 + | putative transposase, ISRm14 RSP_4181 32571 - 32870 + | hypothetical protein TERM 16 33683 - 33626 - g 90 -16.3 -3.86346 | opp_overlap 33649 33676, overlap 33635 33636 CCACGGTCGGAGAAA GCTGATCAAGGCCAAGCCGAAGATGGG CTCG CCCATCTTCGGCTTGGCGCTCCTGCGC ATCGCGCTGCTGGAT TERM 17 33674 - 33635 - g 100 -25.2 -3.21194 | opp_overlap 33649, overlap 33626 33636 GAGAAAGCTGATCAA GGCCAAGCCGAAGATGGG CTCG CCCATCTTCGGCTTGGCG CTCCTGCGCATCGCG TERM 18 33673 - 33636 - g 100 -28.7 -2.52234 | opp_overlap 33649, overlap 33635 33626 AGAAAGCTGATCAAG GCCAAGCCGAAGATGGG CTCG CCCATCTTCGGCTTGGC GCTCCTGCGCATCGC RSP_4182 32931 - 33932 + | transposase IS66 TERM 19 34585 - 34622 + T 78 -17.1 -2.79679 | opp_overlap 34613 34616, overlap 34581 GCTGGATAGGCCTCC AACGGCGTGATGTTCAC AGCT GTGAACATCACGCCGCA TCTCGTCGGGATATT RSP_7387 35824 - 34613 - | replication initiator RepC TERM 20 34998 - 35020 + g 100 -16.2 -4.82901 | opp_overlap 34995 TCCCTTTCAATATGT GGCGCGCCGG CCG CCGGCCCGCC TTTTTCTAAGGCCGG TERM 21 35927 - 35956 + r 100 -10.7 -4.89521 | TAAGATCAAAGTTGG GGTCTCGTGGAGC GCAA GCTTTGCGGGACC TTTTCTTTAGCCTGT repB 36993 - 36007 - | Rep B partitioning protein/ParB-like protein repA 38177 - 36993 - | RepA partitioning protein/ATPase, ParA type TERM 22 37519 - 37504 - G 70 -2.4 -4.57882 | overlap 37505 37507 CGGAAGAAGAACAAA CCAGCG TTGC CGCGAG AAAGCGCCCGCGGCG TERM 23 37847 - 37888 + g 75 -5.7 -4.52589 | gap 1 TCTGCAGATGGTCAC CGGCGCGACGACCGGGCAGA TAA TCT-CCCGCCTTTCGAGCCG TTTTCTCTAGCAGAA RSP_7280 38392 - 38619 + | SpoVT/AbrB-like cell growth regulatory protein RSP_4188 38609 - 39004 + | hypothetical protein RSP_4189 39968 - 39084 - | TonB-dependent receptor protein RSP_4190 40681 - 41274 + | Heme oxygenase TERM 24 42150 - 42115 - gf 82 -15.4 -3.42459 | gap 1, overlap 42117 CATGCAGAACATGAA CACGGCGGCCAGCCTGA CCA TCGGGCTGGCCGACG-G CGACAGGCTGTGGGG TERM 25 42149 - 42117 - gf 89 -19.1 -3.27771 | overlap 42115 TGCAGAACATGAACA CGGCGGCCAGCCTGA CCA TCGGGCTGGCCGACG GCGACAGGCTGTGGG TERM 26 43085 - 43099 + GF 72 -5.6 -4.38273 | GATCTGGTGGTCCGG CTCGGC GGT GACGAG TTTGTTGTGCTCTGT bhpP 41195 - 44137 + | diguanylate cyclase/phosphodiesterase with phytochrome (GAF) sensor RSP_4193 44599 - 45153 + | hypothetical protein RSP_4194 45153 - 46187 + | ATPase-like/sensor kinase RSP_4195 46184 - 46648 + | response regulator receiver protein RSP_7388 46985 - 47521 + | transposase RSP_4197 47658 - 49148 + | antisigma-factor antagonist, STAS RSP_4199 50016 - 50351 + | hypothetical protein RSP_4200 50383 - 51633 + | major facilitator transporter RSP_4201 51804 - 52088 + | ArsR family transcriptional regulator TERM 27 52468 - 52498 + G 72 -3 -4.46615 | GCTGTTCATCGGCCT CGTCTCGGCCGGGG TGC CGCTGGGGGTGACG TTTTCCTTCCTGATC RSP_4202 52085 - 53143 + | transporter RSP_4203 53156 - 53386 + | putative glutaredoxin family protein/Thio-disulfide isomerase RSP_4204 53383 - 53700 + | hypothetical protein RSP_4207 55012 - 56139 + | glycosyl transferase, group 1 RSP_7332 56366 - 56211 - | hypothetical protein RSP_4209 57782 - 56604 - | acyltransferase RSP_4210 58192 - 59004 + | ArsR family transcriptional regulator gapA-1 59004 - 60011 + | glyceraldehyde-3-phosphate dehydrogenase RSP_4212 60055 - 61293 + | putative multidrug-efflux transporter tnp 62195 - 62572 + | putative transposase RSP_4215 63451 - 63080 - | ISxcd1 transposase RSP_7390 65216 - 63999 - | transposase TERM 28 64562 - 64598 + g 73 -10.8 -3.86015 | gap 1, opp_overlap 64560 CGCCGGAAGAAACCT GCTGCACTTCGAGGTGC CGGA GCGCCTCGC-GAGCAGC TTTGTCCACACGCTG TERM 29 65365 - 65402 + H 86 -6.9 -4.87291 | gap 1, overlap 65372 TTCCCGCCCTGAGCT GTAGCTTCC-CCCGCCGG TTA CCGCCGCGCGGGGGTTAC TTTTTGCTTGGCGTA TERM 30 65372 - 65398 + H 86 -13.7 -3.88182 | gap 1, overlap 65365 CCTGAGCTGTAGCTT CCCCCGC-CGGT TACC GCCGCGCGGGGG TTACTTTTTGCTTGG traA 67218 - 67568 + | hypothetical protein TERM 31 67570 - 67610 + F 100 -18.4 -4.12532 | opp_overlap 67578, overlap 67578 AACCCACCCTCTGAG CGGACAGAG-CCGCGCGGCC TCC GGCTGCGCGGCCTTTG-CCG TTTCTGTCTGCGCGG TERM 32 67602 - 67578 - f 82 -18.5 -2.89564 | opp_overlap 67578 67570 CTCTGAGCGGACAGA GCCGCGCGGCC TCC GGCTGCGCGGC CTTTGCCGTTTCTGT TERM 33 67578 - 67602 + F 84 -20.7 -2.84528 | opp_overlap 67578, overlap 67570 CTCTGAGCGGACAGA GCCGCGCGGCC TCC GGCTGCGCGGC CTTTGCCGTTTCTGT traL 67635 - 67925 + | hypothetical protein TERM 34 67973 - 67957 - g 73 -15.1 -3.14132 | TTCGCGTCGGATGAA GGGCGCG CAG CGCGCCC GCAACGTCGTAACGC traE 67925 - 68479 + | hypothetical protein traK 68476 - 69195 + | hypothetical protein TERM 35 70238 - 70184 - g 76 -15.6 -3.14881 | gap 1, opp_overlap 70175 CAATCTGGCGACGAA CGCGGCCATCGCGGGCGCTCTCGGC GGCTTT GCCAAG-GCGCTGACGTCGGCCGCG AGCATCGCCTCCTCC traB 69195 - 70448 + | putative conjugative transfer factor, TraB traV 70445 - 70873 + | hypothetical protein traC 70870 - 73353 + | hypothetical protein RSP_4227 73350 - 73667 + | hypothetical protein trbI 73645 - 74004 + | sex-pilus assembly protein traP 74001 - 74531 + | signal peptidase I traW 74507 - 75145 + | hypothetical protein TERM 36 75906 - 75866 - gf 82 -11.8 -4.11216 | overlap 75867 CGGTCACGGCGAAAA TGCTCG-CGCGCCAGCACCG GCT CGG-GCTGGCGCGCCGGACG TCCGGCAGTTCGGCG TERM 37 75905 - 75867 - gf 74 -15.3 -3.06515 | overlap 75866 GGTCACGGCGAAAAT GCTCG-CGCGCCAGCACCG GCT CGG-GCTGGCGCGCCGGAC GTCCGGCAGTTCGGC traU 75142 - 76128 + | hypothetical protein trbC 76089 - 76841 + | TrbC, sex pilus assembly and mating pair formation protein TERM 38 77594 - 77609 + G 70 -4.6 -4.37092 | overlap 77596 TGGGAGAAGTCATCG GACGGA AGCC TCCGCC TTTTCTGGGACACAT traN 76838 - 78946 + | hypothetical protein RSP_4234 78948 - 79346 + | thioredoxin domain-containing protein traF 79339 - 80172 + | hypothetical protein RSP_4236 80180 - 80425 + | hypothetical protein traH 80436 - 81833 + | hypothetical protein TERM 39 85184 - 85215 + G 77 -10.3 -4.08767 | gap 2 TGAGACGGAAGCTCG TGATGCTCCGCCGAT ACGC ATCGGCGG-GCA-CA TTTTCACAGGCTCGG traG 81837 - 85247 + | hypothetical protein RSP_7391 85998 - 86510 + | hypothetical protein TERM 40 87614 - 87579 - g 74 -9.6 -4.1552 | GATTTGTTTAACAAA GCCTATGAGGGACGCG CCGT CGCATCCCTGAACGGC AGCGGAGGCGTCGAT TERM 41 90778 - 90764 - g 74 -7.2 -4.19817 | opp_overlap 90764 CGCAGGCATTGAAAA TCTGAT TGG ATCAGA TTTTTCGGACGAATT TERM 42 90764 - 90778 + G 79 -7.2 -4.57341 | opp_overlap 90764 CGCAGGCATTGAAAA TCTGAT TGG ATCAGA TTTTTCGGACGAATT RSP_4242 87069 - 91703 + | hemolysin-type calcium-binding protein RSP_7392 92410 - 92138 - | hypothetical protein TERM 43 92218 - 92196 - G 70 -13.4 -3.40597 | overlap 92194 92198 CTTCTCACGGAAATA TAGCGGGGCA GAT CGCCCCGCCA TGTGAACACGGCCGT TERM 44 92216 - 92198 - G 70 -13.8 -3.27408 | overlap 92196 92194 TCTCACGGAAATATA GCGGGGCA GAT CGCCCCGC CATGTGAACACGGCC RSP_4244 94062 - 93277 - | hypothetical protein RSP_4245 95056 - 94487 - | hypothetical protein TERM 45 94785 - 94802 + g 77 -11.3 -4.11216 | TCCGATGCGTCTGCC GGATGCC GAAG GGCATCC TTTTCGCGCTCGCCG RSP_4246 95209 - 95487 + | putative SinR-like protein RSP_7322 95592 - 96833 + | hypothetical protein RSP_4247 96830 - 97312 + | hypothetical protein TERM 46 97348 - 97333 - g 72 -6 -4.44548 | overlap 97320 GACAGGTAACGAAAA CGCTCC TGTG GGCGCG GGCGGCGGGCCGCTG RSP_4248 97293 - 98483 + | hypothetical protein RSP_7393 98876 - 98706 - | hypothetical protein RSP_4251 99777 - 99220 - | hypothetical protein RSP_4252 100270 - 99779 - | hypothetical protein SEQUENCE gi|77461965|ref|NC_007493.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence (length 3188609) RSP_1426 6823 - 5531 - | RNA-binding region RNP-1 TERM 1 6290 - 6319 + g 77 -4.2 -4.7373 | opp_overlap 6290, overlap 6293 CAGCACTGACAAAAT CCACGCGTCGTC ACAGGC GATGACCCGTAG TTTTTGATCCGGTAA TERM 2 7220 - 7241 + G 79 -5.8 -4.72029 | overlap 7221 TATTTGTATCATCAT CGGCAAGC AAGTTC GCTTGCCC TTTTATTGGATTAGG RSP_1427 6925 - 7335 + | hypothetical protein TERM 3 7743 - 7789 + F 95 -26.7 -2.53911 | gap 1 TCCGTCCTTCTCCCG CCTGCGGCTCCGGAGGTG-GGC TCCA GCAGCACCTCCGGAGCCGCGGG TGCCTTCGGGGTTCA TERM 4 9025 - 9043 + G 72 -11.6 -3.59979 | GCTCGCCGTCGCGGA GGGGCCCG GCG CGGGCGCC TTTGACATCGACGAC RSP_1428 8012 - 9433 + | Pre (Mob) type recombination enzyme RSP_1430 9690 - 11195 + | hypothetical protein RSP_1432 11714 - 11361 - | hypothetical protein RSP_1433 12823 - 12125 - | hypothetical protein TERM 5 12176 - 12190 + g 72 -11.4 -3.61517 | ACTGAGTTTCATTCC CGGCTG GTT CAGCCG TTCTTCCGAACCCGT RSP_1434 13823 - 12843 - | putative Zn-dependent oxidoreductase RSP_1435 14498 - 13839 - | TetR family regulatory protein RSP_1436 15031 - 16614 + | ABC transporter ATPase RSP_1437 17755 - 16988 - | ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit RSP_1438 19728 - 17752 - | iron-hydroxamate transporter permease subunit TERM 6 18070 - 18030 - G 86 -14.5 -4.09963 | CCGCAAGAAGAATAA GCGCGACGCGGGCCCGCCG GAG CGGCAGGCCGAGGCCGCCC GCCACCCCGGGGCCG RSP_1439 20624 - 19725 - | ABC Fe+3 hydroxamate (ferrichrome) transporter, periplasmic siderophore binding protein RSP_1440 22717 - 20618 - | TonB dependent, hydroxamate-type ferrisiderophore, outer membrane receptor RSP_1441 23029 - 24177 + | GntR family regulatory protein RSP_1442 24295 - 25551 + | ABC sugar transporter, periplasmic sugar-binding protein TERM 7 25594 - 25567 - f 82 -19.8 -2.52464 | opp_overlap 25567 25571 CCCCGTCCGAACCGA GCCCCCTGCCGC CCCG GCGGCGGGGGGC GCCCGACGCCCCGCC RSP_1443 25619 - 26530 + | ABC sugar transporter, inner membrane subunit RSP_1444 26527 - 27375 + | ABC sugar transporter, inner membrane subunit RSP_1445 27395 - 28498 + | ABC sugar transporter, ATPase subunit RSP_1446 28495 - 29436 + | putative sugar kinase RSP_1447 29463 - 30467 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) RSP_1448 30522 - 31541 + | L-threonine aldolase RSP_1449 32496 - 31726 - | DeoR family transcriptional regulator TERM 8 32233 - 32257 + g 90 -17.1 -3.62046 | GCGCGGGATCAGCGT GGCGGCCAGCG CGC CGATGGCCGCC TTCTTGCCGGCATGG RSP_1450 32769 - 33563 + | inositol monophosphatase family protein RSP_1451 33636 - 35210 + | ABC peptide/nickel/opine transporter, periplasmic substrate-binding protein RSP_1452 35289 - 36269 + | ABC peptide/nickel/opine transporter, inner membrane subunit RSP_1453 36269 - 37180 + | ABC peptide/nickel/opine transporter, inner membrane subunit TERM 9 37596 - 37586 - g 70 -2.4 -4.57569 | CGAGGCCCGGAAAAA GGCG ATC CGGC TGCTCGAGGCGGTGC RSP_1454 37182 - 39035 + | ABC peptide/nickel/opine transporter, fused ATPase subunits RSP_1455 39028 - 40302 + | allantoate amidohydrolase RSP_1456 40299 - 41243 + | hypothetical protein RSP_1457 41240 - 42184 + | putative choline kinase RSP_1458 44969 - 43365 - | putative DNA repair enzyme TERM 10 43879 - 43900 + g 70 -14.5 -2.8619 | opp_overlap 43877, overlap 43870 43869 GAAAGCCGCAACATG TCGATGCCG AACC CGGCATCGA TCTGGTCGATTTTCA RSP_6001 45466 - 45194 - | hypothetical protein RSP_1459 45667 - 46413 + | hypothetical protein RSP_1460 46555 - 46800 + | hypothetical protein kdtA 46812 - 47999 + | putative 3-deoxy-D-manno-octulosonic-acid transferase TERM 11 48739 - 48761 + G 75 -14.8 -3.28712 | GAAGTTCTTCGCCTC GCTCCGCGCC GAA GGCGCCGAGC TTCTGCGCGCCGAGG lpxK 47999 - 48997 + | lipid-A-disaccharide synthase RSP_1463 50367 - 49222 - | putative acyl-CoA transferase/carnitine dehydratase TERM 12 50345 - 50322 - G 74 -9.6 -4.07687 | gap 1, opp_overlap 50334 50336 ATGGGCCGGCCAAAA TCCGGGCCAGT TCG AC-GACCCGGA TCCCGGCAAGCGGCG RSP_1464 51050 - 50364 - | periplasmic thiol-disulphide interchange protein TERM 13 50573 - 50610 + g 73 -14.9 -3.15579 | gap 1 GCCCTGCTGTCTTGC CGATCTTGCGCAGGTTGG TGG CCA-CCTGCGCCGGGTCG TTCGTCACCCATTCC RSP_1465 51577 - 51047 - | hypothetical protein RSP_1466 51659 - 52762 + | A/G-specific DNA-adenine glycosylase RSP_1467 52800 - 54071 + | alkane 1-monooxygenase TERM 14 54174 - 54147 - T 78 -9 -4.34402 | overlap 54149 54165 GCGGCCACATGAAAA GACCCCGCCGTG AGGA CACGGCGAGGAA GTGGTGCCGCGGCGC TERM 15 54172 - 54149 - T 90 -16 -3.77806 | overlap 54147 54165 GGCCACATGAAAAGA CCCCGCCGTG AGGA CACGGCGAGG AAGTGGTGCCGCGGC RSP_1468 55345 - 54227 - | site-specific DNA-methyltransferase rnhB 56072 - 55434 - | ribonuclease HII RSP_1471 56692 - 56228 - | hypothetical protein RSP_6002 56776 - 57339 + | hypothetical protein RSP_1472 57311 - 58015 + | hypothetical protein RSP_1473 58412 - 58041 - | hypothetical protein TERM 16 58552 - 58515 - H 71 -2.6 -4.62069 | gap 1, opp_overlap 58522, overlap 58517 GCTGGAGCCGAAAAA TGTGCG-CGCAGGCCCG GCTGT CATGTCTGCGCCGCAAA AGCCTTGCATCAGGG nspC 58616 - 59713 + | putative carboxynorspermidine decarboxylase protein RSP_1475 59750 - 60988 + | saccharopine dehydrogenase family protein TERM 17 61011 - 61035 + T 82 -11.4 -4.1891 | gap 1 CTCATGATCGGATCG GGCCCGGTCGC TTCG GCGG-CGGGCC TTTCTCTTGGGCAAC RSP_1476 63124 - 61181 - | heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase TERM 18 61779 - 61765 - G 70 -12.8 -3.29144 | TGAGGGCGCCCAGAA GCCGCG CGC CGCGGC CGAGGAGCACCAGCG RSP_6210 63382 - 63203 - | hypothetical protein RSP_1478 65028 - 63409 - | ABC oligopeptide transporter, fused ATPase subunits OppC 66169 - 65030 - | ABC oligopeptide transporter, inner membrane subunit OppC OppB 67085 - 66162 - | ABC oligopeptide transporter, inner membrane subunit OppB TERM 19 67134 - 67104 - R 71 -11.1 -3.54638 | gap 1, opp_overlap 67131, overlap 67094 67105 ACAAGCCCTCGCAAA GGGGGACGCGGATC ACGG GACCCGCG-CCCCG GAACAGGTTACTCGG TERM 20 67133 - 67105 - R 70 -14.6 -2.72461 | gap 1, opp_overlap 67131, overlap 67094 67104 CAAGCCCTCGCAAAG GGGGACGCGGATC ACGG GACCCGCG-CCCC GGAACAGGTTACTCG OppA 68731 - 67142 - | ABC oligopeptide transporter, perplasmic substrate-binding protein OppA RSP_1483 69574 - 69933 + | hypothetical protein TERM 21 69981 - 69954 - T 100 -19.2 -4.26076 | gap 1, opp_overlap 69956 69972 GCACCTTCACGAAAA GAGCCGCCGGCCC GGG GGG-CGGCGGCTC TGATGGCGCGGGGGC TERM 22 69956 - 69979 + T 74 -16 -2.78384 | gap 1, opp_overlap 69954, overlap 69972 ACCTTCACGAAAAGA GCCGCCGGCCC GGG GGG-CGGCGGC TCTGATGGCGCGGGG RSP_1484 70527 - 70003 - | hypothetical protein TERM 23 70048 - 70081 + g 72 -11.7 -3.62046 | gap 1, overlap 70053 GCGACGGCTCGTGTC GGACGCCTCGGCGCGA GGC TTGCGC-GGGGCATCC TTCTTGCCGAAGTCC TERM 24 70277 - 70306 + g 73 -13.5 -3.28712 | gap 1, overlap 70297 TGCGACTTGAAGCCG GCCGCGCGG-GGGG CAT CCTCGCCCCGCGGC TTGTAGGGCCGCGGG TERM 25 70297 - 70323 + g 70 -13.6 -3.21595 | overlap 70277 GCGGGGGGCATCCTC GCCCCGCGGCTT GTA GGGCCGCGGGCC TTCGTCGTCGCGCTT RSP_1485 72337 - 70529 - | ATP-dependent RNA helicase RSP_1486 72528 - 73133 + | TetR family transcriptional regulator RSP_1487 73200 - 73547 + | hypothetical protein RSP_1488 73549 - 74292 + | glyoxalase RSP_1489 74424 - 75338 + | thioredoxin domain-containing protein TERM 26 75586 - 75599 + G 74 -9.5 -4.07568 | CCATCGGCTGCGCGG GCCGG CTCA CCGGC TTTTCCGAGACCGAG RSP_1490 75342 - 76010 + | putative ATP-dependent protease La, LON RSP_1491 76007 - 76186 + | hypothetical protein RSP_1492 77492 - 76263 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase TERM 27 77435 - 77412 - G 74 -8 -4.18494 | GACCGTGACGGAAAA GCCGTTGCGC GCCA GCGCGAGGGC GAGGGCGGGGCCGTT RSP_1493 77589 - 78899 + | amidase TERM 28 78925 - 78911 - f 72 -3.4 -4.58395 | overlap 78912 78918 CTGACCGGCGAAAAA GCCACA ACG CGGGGC GGGCGGGAGGGGCCC TERM 29 78926 - 78945 + F 86 -6.3 -4.83615 | opp_overlap 78918, overlap 78940 GCCACAACGCGGGGC GGGCGGG AGGGGC CCCGGCC TTTTTCTGGACCCTC TERM 30 79006 - 78989 - f 70 -9.1 -3.86346 | gap 1, overlap 79002 CTATCTTGCGACAAA CGGGG-CG ATA CGACCCCG ATCACGAGGCAGTCA RSP_1494 79022 - 80200 + | aminotransferase TERM 31 80283 - 80321 + G 87 -12.2 -4.24745 | ATGCTGGAGCGCCGG GGCCGCGAACTGCTGGGC ATC GGCCTGCTGATCGTGGCC TTTCTCTTCATGCTC TERM 32 80484 - 80504 + G 70 -13.9 -3.21099 | GGTCTGCCCATCGTG GCGGGCGCC TGG GGCGCGCGC TTCCTCCTGCACCGC RSP_1495 80211 - 83495 + | DNA translocase FtsK RSP_1497 83627 - 84265 + | putative outer membrane lipoprotein carrier protein TERM 33 84312 - 84291 - T 70 -12.9 -3.30159 | opp_overlap 84292 84293, overlap 84292 TGAACCGCCCCACAA GCGGGGCGC GGGA GCGTCCCGC GCCCAATTTTCCGTC TERM 34 84318 - 84292 - T 73 -15.8 -2.57881 | opp_overlap 84292 84293, overlap 84291 GAACCGCCCCACAAG CGGGGCGCGGGA GCG TCCCGCGCCCAA TTTTCCGTCAGCGGC TERM 35 84292 - 84318 + T 93 -13.6 -4.18018 | opp_overlap 84291 84292, overlap 84293 GAACCGCCCCACAAG CGGGGCGCGGGA GCG TCCCGCGCCCAA TTTTCCGTCAGCGGC TERM 36 84293 - 84317 + T 82 -17.1 -3.10597 | opp_overlap 84291 84292, overlap 84292 AACCGCCCCACAAGC GGGGCGCGGGA GCG TCCCGCGCCCA ATTTTCCGTCAGCGG RSP_1496 84907 - 84326 - | hypothetical protein RSP_1498 85139 - 85504 + | hypothetical protein RSP_1499 87122 - 85545 - | gamma-glutamyltransferase 2 TERM 37 86086 - 86036 - G 76 -16.9 -2.76589 | gap 1, overlap 86033 86031 AGACCGAATAGATCA GCGACACCG-CCATCCGGTCGCGG TCGA CCACGGTCAGATAGACGGTGTCGC GATGCACGGCCTCGG TERM 38 87226 - 87182 - R 93 -21.4 -3.21912 | TTTCCAAGGGAGGAA CCTCGGCGCCGGAACCGGGT GGGGG ACACGGCCCCGCCGCCGAGG GAAGCGGTCAACCGC RSP_1500 87776 - 87234 - | anti-sigma regulatory kinase RSP_1501 88113 - 87766 - | anti-sigma-factor antagonist domain-containing protein RSP_1502 88207 - 88659 + | GAF domain-containing protein RSP_1503 88711 - 89049 + | hypothetical protein RSP_1504 89325 - 89065 - | hypothetical protein RSP_1506 89409 - 90056 + | ribosomal large subunit pseudouridine synthase A RSP_1505 90787 - 90032 - | putative metallo-phosphoesterase RSP_1507 92244 - 90784 - | aldehyde dehydrogenase RSP_1508 94396 - 92948 - | hypothetical protein RSP_6207 95708 - 94407 - | hypothetical protein TERM 39 95393 - 95413 + g 71 -14.7 -3.01712 | opp_overlap 95366, overlap 95381 CGCCCGCGGGCCCGC CCGAGCTGC GTT GCGGCTCGG TCTTGCGGGGCGGCG RSP_6208 96519 - 95776 - | hypothetical protein TERM 40 97162 - 97197 + G 77 -15.4 -3.53224 | gap 1 GGGCCTTCGGTCGAG GCCGAGGCGGCAGCGGG CGA TCCGC-GCCGCTTCGCC TTTCCACGGCCGATG TERM 41 97421 - 97374 - g 74 -9.8 -4.07568 | gap 2, opp_overlap 97377, overlap 97377 GGTGCTGGCCGAAAA GACCC-GCCGCGCGCT-GGCGG TCTATG CGGCCGAGGGCGCGGCCGAGCC CGCGCTGGCCGTGGC RSP_1509 96592 - 97686 + | O-sialoglycoprotein endopeptidase TERM 42 97875 - 97887 + G 71 -9.1 -4.07568 | GCGGTGCCCATGCAG GCCCT CGG AGGGC TTTTGCGGGCCGAGG RSP_1510 97683 - 98600 + | putative glycerol-3-phosphate dehydrogenase (NAD(P)+) RSP_1511 98604 - 98876 + | YciI-like protein RSP_1512 98876 - 99289 + | hypothetical protein TERM 43 99338 - 99308 - f 74 -11.8 -3.75629 | GATCGGTAACGGAAA TGGAGGATCCCACC CCA GCAGGGACCCTCCA TCCACCCCACATGCG TERM 44 100599 - 100619 + G 75 -12.5 -3.64487 | overlap 100593 TATACCGGCGCCGAC GACCGCGAG GCG CTCGCGGCC TTCTTCGCCCTCTCG trpB 99597 - 100802 + | tryptophan synthase subunit beta TERM 45 100939 - 100916 - T 100 -17.4 -3.9712 | CGACCTCAGCAGAAA GGGCCGCCGG TTTC CCGACGGCCC CTTCCGAACCCGCGA ahcY 102352 - 100961 - | S-adenosyl-L-homocysteine hydrolase RSP_1515 102475 - 103431 + | hypothetical protein RSP_1516 103428 - 104012 + | putative S-adenosyl L-homocystein hydrolase spbA 104338 - 104024 - | HNS family histone-like protein TERM 46 104146 - 104158 + g 73 -10.5 -3.76402 | CGTATTTCGGTTGAG CGGCG GCG CGCCG TTTGGTCGCTGCGGT TERM 47 104550 - 104527 - R 100 -16 -4.8622 | gap 1, opp_overlap 104526 CCTGCCAATGAAAAA GGCGGCAGGCC CTC GGCC-GCCGCC CTCGTTCCGCCGGTG prrA 105128 - 104574 - | PrrA (RegA), response regulator involved in oxygen regulation of photosynthesis genes prrC 105816 - 105121 - | PrrC prrB 105908 - 107296 + | sensor histidine kinase PrrB (RegB) TERM 48 107469 - 107492 + G 73 -13.8 -3.29461 | overlap 107463 107437 107470 107472 TGATCCTGACCGCGG TCGCGGCGGC TTCT GCCGCCGTGG TTCTGGCGGGCCTTC RSP_1521 107423 - 108985 + | hypothetical protein TERM 49 109083 - 109053 - f 75 -6.1 -4.46212 | gap 2, overlap 109054 CCGGGCATGAGAAAA TGGCCTGTGCCGCGC GGG ACGCGG-AC-GGCCG GTCGTGACTGCGCAG RSP_1522 109269 - 109754 + | hypothetical protein RSP_1523 109747 - 110772 + | hypothetical protein RSP_1524 110754 - 111419 + | nucleotidyltransferase family protein RSP_1525 111412 - 114405 + | putative helicase/exonuclease RSP_1527 114434 - 117754 + | UvrD/Rep family helicase trxA 117813 - 118133 + | thioredoxin TERM 50 118162 - 118179 + T 100 -14.1 -4.4078 | opp_overlap 118155 AGCAGAGACCGGACG GGGCGCC TTCG GGCGCCC TTTTCCTTGAGCAAG RSP_1530 119174 - 118266 - | hypothetical protein TERM 51 119235 - 119262 + H 70 -12.6 -3.28924 | GTGCGCTTAACGCCG CCGGTCCGGCGG GCGG CCGCCGCACGGG TTGTGCCCCCGGATC RSP_1531 119311 - 119868 + | ATP-dependent protease peptidase subunit hslU 119865 - 121166 + | ATP-dependent protease ATP-binding subunit RSP_1533 122749 - 121217 - | putative alginate O-acetyltransferase RSP_1534 122994 - 122749 - | putative acyl carrier protein RSP_1535 124968 - 123055 - | hypothetical protein RSP_6005 125689 - 124949 - | putative short chain dehydrogenase TERM 52 125198 - 125231 + g 79 -15.9 -3.29144 | gap 1 GGGCCCCAGTTCGGC GGCGGCCGCCGCGAGC AGG GCGCGCAGCG-CCGCC TTCTGCGCCACATAG RSP_1536 126090 - 125686 - | hypothetical protein RSP_1537 126368 - 127282 + | hypothetical protein RSP_1538 127361 - 128134 + | glucose-1-phosphate cytidylyltransferase TERM 53 128249 - 128271 + T 74 -12.6 -3.65902 | AGCATGAGCAGCAGC GGCCGGCGCG CCT CGGGTCGGCC TTTGGATCAGGTGAG RSP_1539 129377 - 128370 - | glycosyl transferase family protein TERM 54 129158 - 129174 + g 70 -9.3 -3.7941 | GCCCCGCGTTCCGCG CGGCGCC GGG GCCGCCG TTCTTCTGGGCGATC RSP_1540 130813 - 129719 - | secreted hydrolase RSP_1541 133190 - 130803 - | ABC transporter inner membrane protein RSP_1542 133867 - 133187 - | ABC transporter, ATPase subunit RSP_1543 135211 - 134153 - | hypothetical protein RSP_1544 136202 - 135213 - | signal peptide protein TERM 55 135457 - 135403 - G 72 -12.2 -3.64703 | gap 4 CGCGCCTGATCGAAA CCCTCG--CGGCT-GCGCGGGCTGTCGG GGG CCAGC-GCCAGCGCCAGCCGTTCGAGGG CGGCGAGCGACAGTT RSP_1545 137710 - 136202 - | thiol oxidoreductase with 2 cytochrome c heme-binding sites bfr 138374 - 137889 - | bacterioferritin RSP_1547 138618 - 138364 - | bacterioferritin-associated ferredoxin RSP_1548 139968 - 138700 - | imelysin RSP_6006 140183 - 140022 - | hypothetical protein RSP_1549 140534 - 141217 + | hypothetical protein RSP_1550 142060 - 141230 - | IclR family transcriptional regulator TERM 56 142125 - 142113 - H 77 -3.3 -4.72272 | CCGGTGCATGAAAAA TGCTG CAG CTGCA CTTGGCAAGGGCGAA TERM 57 142505 - 142531 + G 70 -14.4 -3.14564 | TCCGGCCGCAACGCC CGCCAGGTGCGC GAG GCGCATCTGGCC TTCGTCGCCCGCTCG RSP_1551 142328 - 142708 + | putative glyoxalase family protein TERM 58 142729 - 142749 + T 100 -18.3 -4.72272 | opp_overlap 142721 142723 GCGAAAAGAGGCGGA GGCGCCCGA CGG TCGGGCGCC TTTTTCATGCGCGGG RSP_1552 143317 - 142826 - | ureidoglycolate hydrolase RSP_1553 144270 - 143434 - | hypothetical protein RSP_1554 145682 - 144267 - | polysaccharide deacetylase RSP_1555 145829 - 146182 + | transthyretin-like protein TERM 59 146467 - 146446 - g 79 -5.7 -4.63527 | overlap 146447 CGATGATCCGAAAAA GGTCTGGCC GAGC GGCCTGACG ATCGCCGAAGCGGAA puc2B 146426 - 146581 + | light-harvesting complex, beta subunit TERM 60 147160 - 147108 - g 76 -16.2 -3.14132 | GCTCCGGCCGAGGAA GCCGCTCCGGTCGCCGAACCGG CAGCGGAGC CCGCTCCGGCGGCCGAAGCTGC GGCTCCGGTGGCCGA TERM 61 147320 - 147365 + G 70 -13.1 -3.33696 | opp_overlap 147310 CATGACCGACGCCAA CGGCATGCCGGTTGCGGCGAC GCTC GACCCGGTGACCGGCCTGCCG TTCGTTCCGGCCGCG puc2A 146595 - 147386 + | light-harvesting complex alpha subunit TERM 62 147428 - 147409 - f 84 -16.4 -3.53224 | opp_overlap 147409 CATTTCTCTGGGAAA GGCCGCCC TTTG GGGCGGCC TTTTCACGTTGTGGC TERM 63 147409 - 147428 + F 100 -16.4 -4.21936 | opp_overlap 147409 CATTTCTCTGGGAAA GGCCGCCC TTTG GGGCGGCC TTTTCACGTTGTGGC icd 147831 - 149045 + | isocitrate dehydrogenase RSP_1558 150340 - 148997 - | 2-dehydropantoate 2-reductase TERM 64 149077 - 149051 - G 75 -16.5 -3.05384 | opp_overlap 149041 149040 CGGCGCCTGAGCGAA GGCCGGGGGGC TGTCT GCCCCCCGGAC CCCCCGAGGATATTT TERM 65 149776 - 149822 + g 71 -8.6 -4.07568 | overlap 149796 GCACCGGCGCCTTGA GCCCCGCCGC-CGTCAGCGCCT CCGAC AGGCGCAG-CGCGCGGTCGGAC TTTTCCCCCGAAGGC RSP_1561 151872 - 150337 - | AMP-forming acyl-CoA synthetase/ligase TERM 66 150605 - 150650 + g 77 -16.9 -2.90075 | gap 1, overlap 150608 150610 150612 TGGTCCATCAGCACC CCGTCGACCTCGAGCGGCGAGA TCT TCTCGCCGC-CGCGGTTGATGA TCTCCTTGAGCCGCC TERM 67 150608 - 150647 + g 84 -19.4 -2.69964 | gap 1, overlap 150605 150610 150612 TCCATCAGCACCCCG TCGACCTCGAGCGGCGAGA TCT TCTCGCCGC-CGCGGTTGA TGATCTCCTTGAGCC TERM 68 150612 - 150643 + g 80 -16.6 -3.26433 | gap 1, overlap 150610 150608 150605 TCAGCACCCCGTCGA CCTCGAGCGGCGAGA TCT TCTCGCCGC-CGCGG TTGATGATCTCCTTG RSP_1562 152691 - 152005 - | fumarylacetoacetate hydrolase family protein RSP_1563 153765 - 152758 - | putative oxidoreductase RSP_1564 155038 - 153818 - | putative transmembrane transport protein appA 156482 - 155130 - | AppA, antirepressor of ppsR, sensor of blue light RSP_1566 156951 - 157640 + | hypothetical protein RSP_1567 160243 - 157676 - | sensory transduction histidine kinase TERM 69 157979 - 158015 + g 71 -15.2 -3.09492 | gap 1 GTCGAGGATCATCTG CCGGATCAGCCC-GTGG AGTG CCACCGGGCCGATCTGG TCTTCCAGTTCGCGC RSP_1568 161717 - 160311 - | L-glutamine synthetase RSP_1569 163087 - 161714 - | aminotransferase TERM 70 162518 - 162539 + g 75 -15.1 -3.30124 | CATGCCCACGAGGCC CGGCCGCGC CCGC GTGCGGCCG TTCTCGAGCATGACC purK 164166 - 163084 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 164644 - 164159 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit RSP_6218 165098 - 164880 - | hypothetical protein TERM 71 164925 - 164942 + g 71 -9.1 -4.14257 | CTCGATCTTCACGAT CTGGTCC TTGA GGGCCAG TTTCTGCTTCTTGAG RSP_1572 165426 - 165893 + | HSP20 family protein RSP_1573 165890 - 166114 + | hypothetical protein TERM 72 166131 - 166160 + F 78 -10 -4.11692 | gap 1, overlap 166132 GCCTCCGGGGAGAGG CCCTCGGCCG-CT TCGAC AGACGGCCGAGGA TTTTCCAGCTGCCTC RSP_1574 166389 - 166865 + | cytochrome b562 TERM 73 166912 - 166943 + T 75 -16.6 -2.87931 | opp_overlap 166918, overlap 166918 GGCTCCGTCCGGGAA GCGAAAGGGGCGCC CGCG GGCGCCCCTTTTTC TGTCTAGAGCGTCAG TERM 74 166918 - 166937 + T 100 -16.4 -5.03994 | opp_overlap 166918, overlap 166912 GTCCGGGAAGCGAAA GGGGCGCC CGCG GGCGCCCC TTTTTCTGTCTAGAG TERM 75 166937 - 166918 - T 90 -16.4 -3.75153 | opp_overlap 166918 166912 GTCCGGGAAGCGAAA GGGGCGCC CGCG GGCGCCCC TTTTTCTGTCTAGAG sopT 168718 - 166955 - | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein trxB 169806 - 168853 - | thioredoxin reductase putR 170014 - 170514 + | AsnC family transcriptional regulator RSP_1578 171389 - 170637 - | hypothetical protein RSP_1579 172448 - 171393 - | hypothetical protein TERM 76 171611 - 171571 - G 79 -16.2 -3.41051 | CGAGGCGCAGGAGAA GCG-CGCCCCTGCGGGACGA GGG CCGTGCCGCAGGG-CGCCGC CGCCTGCGCCAGGGC lgt 173323 - 172445 - | prolipoprotein diacylglyceryl transferase RSP_1581 173428 - 173676 + | hypothetical protein TERM 77 174003 - 174019 + F 75 -9.3 -4.21812 | opp_overlap 174002 174001 GCTTCGCCATAAATC CGGGGCG TCT CGCGCCG TTCTTTTCGCTAGCG RSP_1582 174090 - 174365 + | putative sulfate transporter/antisigma-factor antagonist cheY3 174362 - 174727 + | chemotaxis response regulator, CheY3 TERM 78 174877 - 174909 + G 73 -15 -3.19389 | opp_overlap 174870 ACGATCAAGGGCTCG GGC-GCCATGTTCGGC TTC GCCG-ACATGGCCGCC TTCGTCCATGCGTTC cheA2 174724 - 176688 + | chemotaxis histidine protein kinase cheW2 176685 - 177176 + | chemotaxis protein, CheW2 cheW3 177300 - 177836 + | chemotaxis protein, CheW3 cheR2 177833 - 178669 + | chemotaxis methyltransferase, CheR2 cheB1 178672 - 179781 + | chemotaxis methylesterase, CheB1 tlpC 179778 - 181520 + | transducer-like protein, TlpC RSP_1591 181568 - 182569 + | glutathione S-transferase RSP_1590 183996 - 182539 - | two component, sigma54 specific, Fis family transcriptional regulator RSP_6007 184544 - 183993 - | hypothetical protein acsA 186696 - 184780 - | acyl-CoA sythetase RSP_1593 189112 - 186833 - | malic enzyme TERM 79 189212 - 189249 + H 73 -12.7 -3.49475 | gap 2, opp_overlap 189235, overlap 189216 CTCCTCGGCAGAGGC GGCGGCGGGCCCCGGGC GCGAAA GCCCGCG-CCCGC-GCC TTCTGTGCCGGTGCC cdd 189311 - 189715 + | cytidine deaminase deoA 189717 - 191024 + | thymidine phosphorylase deoB 191024 - 192220 + | phosphopentomutase add 192217 - 193200 + | adenosine deaminase RSP_1598 193193 - 193825 + | uracil phosphoribosyltransferase TERM 80 194780 - 194815 + G 85 -17.5 -3.53761 | opp_overlap 194774 ACCGAAGAAGCCTCT GCCCGTGCCGCGCTG CGCCGC CTGCGCGGGACGGGC TTTCGCGACGCATTC RSP_6008 193892 - 194839 + | hypothetical protein TERM 81 194903 - 194873 - T 81 -12.4 -3.91897 | opp_overlap 194876, overlap 194874 CCGGGCAGTCATAAA CCTCGCCCCTCCGC TCG GCGGAGGGGCGTTT TTCTTGGGATCTCGG TERM 82 194902 - 194874 - T 75 -15.9 -2.94924 | opp_overlap 194876, overlap 194873 CGGGCAGTCATAAAC CTCGCCCCTCCGC TCG GCGGAGGGGCGTT TTTCTTGGGATCTCG TERM 83 194876 - 194900 + T 100 -22.9 -5.09204 | opp_overlap 194874 194873 GGCAGTCATAAACCT CGCCCCTCCGC TCG GCGGAGGGGCG TTTTTCTTGGGATCT RSP_6009 196006 - 194987 - | hypothetical protein RSP_1599 197736 - 196087 - | AMP-binding protein TERM 84 197678 - 197700 + g 77 -6.1 -4.56597 | overlap 197669 197679 TGCGACAGGGGCGTA AGCGCCGCG TAATT CGCCGCGCA TTTTTCCAGCCCGCG RSP_1600 197835 - 198767 + | drug/metabolite exporter (DME) family protein RSP_1601 199400 - 198771 - | hypothetical protein RSP_1602 200845 - 199574 - | TRAP dicarboxylate family transporter DctM subunit TERM 85 200224 - 200182 - G 79 -14.1 -3.58864 | gap 1, opp_overlap 200192, overlap 200180 CCAGCACGAGAAAGA GCGCAGGCCAGGCGCC-GAC GATC GTCTGGCGCGTCTCCTGCGC GGTGGGCCAGCTGTC RSP_1604 201355 - 200870 - | TRAP dicarboxylate family transporter DctQ subunit TERM 86 201419 - 201382 - R 87 -19.9 -3.05844 | gap 1, overlap 201385 201387 GGTCGGAGGGGAATA GCAGACCGGCCGCGCG GGGAGGA CGCGCGGCCGGCC-GC GAGCATCACTCGGCG TERM 87 201417 - 201385 - R 86 -21.3 -2.75074 | overlap 201382 201387 CGGAGGGGAATAGCA GACCGGCCGCGCG GGGAGGA CGCGCGGCCGGCC GCGAGCATCACTCGG TERM 88 201415 - 201387 - R 84 -20.3 -2.92026 | overlap 201385 201382 GAGGGGAATAGCAGA CCGGCCGCGCG GGGAGGA CGCGCGGCCGG CCGCGAGCATCACTC RSP_1605 202399 - 201425 - | TRAP dicarboxylate family transporter DctP subunit RSP_1606 203124 - 202423 - | GntR family transcriptional regulator RSP_1607 204139 - 203237 - | GntR family transcriptional regulator TERM 89 204237 - 204210 - H 100 -3.3 -5.68438 | gap 1, opp_overlap 204214, overlap 204212 204213 204214 TTATTAAATAAAAAA CACCCGCAGCGG ACAAG CCGCCGCGT-CG TCTGACCGCCTCCCT TERM 90 204236 - 204212 - H 72 -4.8 -4.47052 | opp_overlap 204214, overlap 204210 204213 204214 ATTAAATAAAAAACA CCCGCAGCGG ACAAG CCGCCGCGTC GTCTGACCGCCTCCC RSP_1608 204271 - 205263 + | putative Zn-dependent dehydrogenase RSP_1609 205256 - 206356 + | putative altronate dehydrogenase RSP_1610 206353 - 207855 + | altronate hydrolase RSP_1611 207932 - 209725 + | sensor histidine kinase RSP_1612 209722 - 211041 + | sigma-54 dependent transcriptional regulator RSP_1613 211252 - 212205 + | TRAP dicarboxylate family transporter DctP subunit TERM 91 212218 - 212243 + F 93 -17.5 -3.61178 | opp_overlap 212207, overlap 212219 TAACGGCATCTGCCG CGGCCCGGGCG GCAT CGCCCGGGCCC TTTCCCGTCGCTCCG TERM 92 212219 - 212242 + F 86 -21 -2.76492 | opp_overlap 212207, overlap 212218 AACGGCATCTGCCGC GGCCCGGGCG GCAT CGCCCGGGCC CTTTCCCGTCGCTCC RSP_1614 212309 - 214426 + | TRAP dicarboxylate family transporter DctQ subunit RSP_1615 214423 - 214791 + | hypothetical protein RSP_1616 215519 - 215064 - | hypothetical protein RSP_1618 216713 - 216210 - | hypothetical protein RSP_6011 216837 - 217037 + | putative transposase protein RSP_1619 217379 - 217086 - | hypothetical protein RSP_1620 217383 - 217676 + | hypothetical protein RSP_1621 217914 - 219383 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 93 219495 - 219509 + G 70 -2.8 -4.57569 | AAAAGTTTGGAGATT TCGAAA AAG TATCGA TTTTTGGCGGCATGA RSP_1623 219377 - 220213 + | hypothetical protein RSP_1622 221230 - 220172 - | putative DNA-binding protein TERM 94 221153 - 221186 + g 83 -6 -4.88067 | gap 1, opp_overlap 221151 221153 221155, overlap 221155 TTCCATACGAGAATA TACGGCCTGAGCAAC GCCTA GTTGCTCCG-CCGTC TTTTTCTGCGTAAGT TERM 95 221155 - 221184 + g 71 -8.6 -4.06182 | gap 1, opp_overlap 221155 221153 221151, overlap 221153 CCATACGAGAATATA CGGCCTGAGCAAC GCCTA GTTGCTCCG-CCG TCTTTTTCTGCGTAA RSP_1624 221896 - 221252 - | hypothetical protein RSP_1625 222592 - 222110 - | hypothetical protein RSP_1626 223414 - 222605 - | hypothetical protein TERM 96 223442 - 223423 - R 86 -12.1 -4.2349 | TCTCCATATGCAAAA GCCCCGC ACGAGG GCGGGGC GTGGGTGGTCGGACC RSP_1627 224274 - 223468 - | putative N-6 adenine-specific DNA methylase RSP_1628 224676 - 225674 + | sensor histidine protein kinase TERM 97 225692 - 225735 + G 73 -10.8 -3.78934 | opp_overlap 225698, overlap 225695 225729 CGAGTATACCATGCC GAACGAGCCGGCCGAGCCTC GTCC GAAGCAGGGCCTGCTCGTCC TTGTTGTCGAGGACG RSP_1629 225687 - 226076 + | response regulator receiver domain-containing protein RSP_1630 226464 - 226147 - | hypothetical protein TERM 98 226504 - 226523 + r 73 -16.4 -2.67694 | overlap 226501 TCGCGCGGGTCTCGT CCCGGCCG GGGG CGGCCGGG TCCTGTCATGATGAT RSP_1631 226936 - 226598 - | hypothetical protein RSP_1632 227257 - 226940 - | hypothetical protein RSP_1633 228748 - 227264 - | hypothetical protein RSP_1635 229655 - 228765 - | hypothetical protein RSP_1636 234661 - 229655 - | lambda family phage tail tape measure protein TERM 99 232517 - 232499 - G 72 -11.6 -3.61089 | overlap 232500 GCCGAAGAAGGAGAA GGCCGCCG CCA CGGCGGCA ATGGGGCCGAGGATC TERM 100 234700 - 234683 - R 74 -14.1 -3.35679 | opp_overlap 234680 CCTCCTCATGGAGAA GGCCGCC CGGA GGCGGCC TGGTCAGTTGCGATG RSP_1637 234960 - 234724 - | hypothetical protein TERM 101 235068 - 235089 + r 71 -11.5 -3.64703 | GGCCGGCTTGGCTTT CGCTCTGGC CGGC GCCGGGGCG TTTCCCTCGGGAGCC RSP_1638 235418 - 235044 - | hypothetical protein RSP_1639 235861 - 235421 - | hypothetical protein TERM 102 235937 - 235895 - R 70 -9.1 -3.88787 | gap 2, opp_overlap 235907 GTAGATGGTGAGAAA GTCGAGCGA-GAC-CCGGAAG GGC CGCCCGGTGTCGTCGCCCGGC TCGCGGAGGTCGCGC RSP_6012 236251 - 235871 - | hypothetical protein RSP_6013 236422 - 236255 - | hypothetical protein TERM 103 236386 - 236405 + g 70 -10 -3.8512 | gap 1 GATCGGAGAGCTGGC GCACCACCG CGT CGG-GGTGC TTCTTCTCATCGGTC TERM 104 236437 - 236457 + r 73 -10.4 -3.85817 | gap 1 CTTCGCTGCTCCTTT CGCTGCGGC CCGC GCCGC-GCG TTTCTCGGCGCGGGT RSP_1640 236892 - 236419 - | hypothetical protein RSP_1641 237221 - 236889 - | hypothetical protein RSP_1643 237724 - 237218 - | hypothetical protein RSP_1644 238019 - 237729 - | hypothetical protein TERM 105 238109 - 238080 - R 70 -15 -2.72344 | CGGGACGCCGAACGA GTTCGGCCCCGG GGAGCG CCGGGGCCGAAG AGGGACGTGGACAGG RSP_1645 239486 - 238152 - | putative phage-related protein TERM 106 239547 - 239527 - H 78 -13.9 -3.59979 | overlap 239528 TCCGCGCAGCCGAAA GCCCCCGCC ACG GGCGGGGGA TGGGAAGGGGTGAAG TERM 107 239546 - 239528 - H 78 -17.4 -2.75844 | overlap 239527 CCGCGCAGCCGAAAG CCCCCGCC ACG GGCGGGGG ATGGGAAGGGGTGAA RSP_1646 239740 - 240483 + | transmembrane protein RSP_1647 241453 - 240494 - | peptidase RSP_1648 242718 - 241450 - | hypothetical protein TERM 108 241698 - 241645 - G 75 -13.2 -3.62597 | opp_overlap 241690 241692 GTCATGGCGGAAGAA GAGG-CCCGCCCGCCGCTCGGCCT CGGTCAGC ACGCCGAGC-GCGAGCTGGTCCTC GACCTGTTTCGCCCA RSP_1649 243704 - 242832 - | DMT family permease RSP_1650 245681 - 244023 - | hypothetical protein RSP_1651 246105 - 245668 - | hypothetical protein TERM 109 246312 - 246322 + r 91 -2.4 -5.43866 | overlap 246306 TCCTCTCATCCCTCT GCAC GGT GGGC TTTTTTTGCCAATTC RSP_1652 246852 - 246370 - | hypothetical protein TERM 110 246838 - 246798 - G 85 -16.8 -3.55563 | opp_overlap 246803, overlap 246803 AGGGGAGGCTCCAAA GCGAAGCGCCCGGAGAGC TTGGG GCTCGCCGGGCGCTTGTC TTCGATGATGGCAAT TERM 111 246803 - 246833 + g 95 -20.4 -3.69702 | opp_overlap 246798 246803 AGGCTCCAAAGCGAA GCGCCCGGAGAGCT TGG GGCTCGCCGGGCGC TTGTCTTCGATGATG TERM 112 246833 - 246803 - G 87 -19.7 -3.27704 | opp_overlap 246803, overlap 246798 AGGCTCCAAAGCGAA GCGCCCGGAGAGC TTGGG GCTCGCCGGGCGC TTGTCTTCGATGATG RSP_1653 247516 - 246887 - | hypothetical protein RSP_1654 248159 - 247581 - | hypothetical protein TERM 113 248209 - 248227 + r 72 -4.5 -4.43859 | overlap 248212 ACCGCCCGATCTTCT CACCCCT GCAGA AGGGATG TTTTGTCAGGTTCTG RSP_6014 249057 - 248368 - | hypothetical protein RSP_1655 249615 - 249064 - | hypothetical protein TERM 114 249573 - 249548 - G 93 -13.9 -4.18018 | opp_overlap 249559, overlap 249549 CCGTTCGATCGAAAA GCGCCGGAGGC CGCA GCCCCCGGCGA AGTGGCCGCGTCCTG TERM 115 249572 - 249549 - G 79 -17.4 -3.10597 | opp_overlap 249559, overlap 249548 CGTTCGATCGAAAAG CGCCGGAGGC CGCA GCCCCCGGCG AAGTGGCCGCGTCCT RSP_6209 250098 - 250460 + | hypothetical protein RSP_1656 250745 - 250930 + | hypothetical protein RSP_1657 250927 - 251124 + | hypothetical protein RSP_1658 251121 - 251453 + | hypothetical protein RSP_1659 251453 - 251848 + | hypothetical protein RSP_1660 251971 - 253140 + | ParB family protein RSP_1661 253514 - 253789 + | hypothetical protein RSP_6015 253865 - 254107 + | hypothetical protein RSP_1662 254119 - 255165 + | integrase/recombinase TERM 116 255475 - 255459 - f 83 -12.3 -3.99324 | opp_overlap 255459 255458 GCTCAGGATCAGAAA GGCCGAA GTG TTCGGCC GTTATCGCTAACATG RSP_1663 255570 - 256607 + | LacI family transcription regulator RSP_1664 257066 - 256614 - | hypothetical protein RSP_1665 257671 - 257063 - | RhtB family transporter TERM 117 257591 - 257566 - G 75 -14.7 -3.34233 | gap 1, overlap 257558 CGAGAACCGCCAGAA GCCCGGCG-CGG ATG CCGCCGCCGAGC GTGGCCGAGAGCGTG LytB 258641 - 257682 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RSP_1667 259364 - 258792 - | hypothetical protein TERM 118 259645 - 259661 + G 81 -2.9 -5.00616 | opp_overlap 259657, overlap 259645 CATTTCGGGTGAGCA GGCTGTT CAA AACGCCC TTTTTTCCCGCGGGC FolK 259554 - 260090 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase rpoZ 260175 - 260528 + | DNA-directed RNA polymerase subunit omega spoT/relA 260559 - 262676 + | RelA/SpoT family protein RSP_1671 262693 - 263349 + | hypothetical protein pdxJ 263386 - 264144 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 119 264228 - 264249 + G 72 -13 -3.55563 | opp_overlap 264228 264226 ACCGGATGGAGAAGA CGCTCGCC CGCTTC GGCGAGCG TTTCCGCAATCGCGT acpS 264176 - 264589 + | 4'-phosphopantetheinyl transferase RSP_1674 264610 - 265449 + | signal peptidase I rnc 265446 - 266135 + | RNAse III era 266128 - 267042 + | GTP-binding protein Era RSP_1677 267064 - 267399 + | hypothetical protein TERM 120 267977 - 267935 - g 71 -14.6 -3.04144 | opp_overlap 267961 TCGTCAGCCCGAAGA CCGGCCGCGCCGTCAGCAGC GGG GCCGCGGGCGGCTGGGCCGA CCGGCTGTTCCCGCT recO 267436 - 268155 + | DNA repair protein RecO RSP_1679 269841 - 268195 - | acyl-CoA dehydrogenase TERM 121 269410 - 269426 + g 71 -15.1 -3.02511 | CAGCGCCACCAGCCG CGCCCGC GCG GCGGGCG TATTGCCCGCCTGGA pckA 272175 - 270577 - | phosphoenolpyruvate carboxykinase RSP_1681 272514 - 273215 + | two-component transcriptional regulator TERM 122 273929 - 273884 - g 70 -13.9 -3.18023 | gap 1, opp_overlap 273886, overlap 273882 273885 GGACCACGATCAACA CGGGGCGCGACCGCAACG-GCG GCG CGCTCTTTTCGGTCGCGACCCC CATCCTCGACGGAGA TERM 123 273928 - 273885 - g 74 -17.4 -2.50492 | gap 1, opp_overlap 273886, overlap 273884 273882 GACCACGATCAACAC GGGGCGCGACCGCAACG-GCG GCG CGCTCTTTTCGGTCGCGACCC CCATCCTCGACGGAG TERM 124 273886 - 273912 + G 93 -13.7 -4.18018 | gap 1, opp_overlap 273885 273884 273882 ACCACGATCAACACG GGGCGCGACCGC AACG GCGG-CGCGCTC TTTTCGGTCGCGACC RSP_1682 273238 - 274956 + | two-component sensor histidine kinase RSP_1683 274953 - 275381 + | Hpr(Ser) kinase/phosphatase RSP_1684 275403 - 276311 + | hypothetical protein RSP_1685 276308 - 276706 + | PTS system, IIA component RSP_1686 276703 - 276972 + | putative phosphocarrier HPr protein RSP_1688 277116 - 278213 + | acyltransferase hbdA 279055 - 278180 - | 3-hydroxybutyryl-CoA dehydrogenase RSP_1689 279224 - 280048 + | hypothetical protein TERM 125 280072 - 280051 - T 95 -18.7 -3.60805 | AGAGCTGATGTGAAA CGGGCGCCC CGGG GGGCGCCCG CCTGCGACCGGCTCA etfA 281022 - 280096 - | electron transfer flavoprotein subunit alpha TERM 126 280758 - 280710 - G 72 -16.1 -2.74012 | opp_overlap 280710 CCATGACGTCAAGGA GCG-CGGCCACCCGCGGCAGC ACGTTCTTG GCCGCCG-AGGTGGCCGGCGC GAGAATGTGGCTGTA etfB 281783 - 281022 - | electron transfer flavoprotein subunit beta pduO 282492 - 281914 - | ATP:cob(I)alamin adenosyltransferase RSP_6016 282701 - 282492 - | hypothetical protein RSP_1694 283684 - 282869 - | short-chain dehydrogenase/reductase TERM 127 282962 - 282995 + g 80 -10.1 -4.18018 | overlap 282956 GATCCGGTAGCGCGC GCGGGGGCGGGGGCT TTCC AGCGCCTGCACCAGC TTTTCCGTGACGGCG RSP_1695 284566 - 283985 - | hypothetical protein RSP_1696 284679 - 286982 + | DNA topoisomerase IV subunit A RSP_1697 287111 - 287716 + | hypothetical protein TERM 128 287709 - 287723 + F 76 -2.8 -4.71426 | opp_overlap 287710, overlap 287704 287710 CCGCGCCGGGGAAAG ACAAGT GAT ACTTGA TTTTCTTCCTGCCAA tufA 287817 - 288992 + | elongation factor Tu TERM 129 289016 - 289039 + F 100 -21 -4.54727 | GATCGGTCGGCGCAG GGCGCGCGGG GCAT CCCGCGCGCC TTTTCCTTTGGCGCC TERM 130 289666 - 289684 + G 77 -14.6 -3.53224 | GGCCGGCAATCCGGC GCGCATCC TGC GGATGCGC TTTCCGCCCGAGGTG RSP_1706 289160 - 289804 + | putative acetyltransferase TERM 131 289807 - 289861 + F 80 -17.1 -2.87931 | gap 1, overlap 289793 GGCCGCGCGCTGACG CCGCAGCCGGCGCACGGGGCGCAACT TTGC ACTTGCGGTCGG-GCGCCGGCTGCCG TATCTCGCGGCTGGC secE 290047 - 290241 + | preprotein translocase subunit SecE TERM 132 290300 - 290328 + F 100 -11.7 -5.55769 | TCACTGGGAAGAGGC CGGCGCGCAGC GATTCGG GTTGCGCGCTG TTTTTTGTTCTGGGG RSP_1704 290404 - 290937 + | transcription antitermination protein nusG rplK 291030 - 291482 + | 50S ribosomal protein L11 rplA 291486 - 292184 + | 50S ribosomal protein L1 TERM 133 292225 - 292202 - f 70 -12.4 -3.28712 | overlap 292203 CGGGGGCTTTGAGAA TTCCCCTGCC CTCG GGCAGGGGAT GACGGGGCGGAGACG TERM 134 292224 - 292203 - f 73 -15.9 -2.57132 | overlap 292202 GGGGGCTTTGAGAAT TCCCCTGCC CTCG GGCAGGGGA TGACGGGGCGGAGAC TERM 135 292467 - 292447 - g 72 -5.3 -4.40003 | opp_overlap 292446 292459 292462, overlap 292448 292459 GCCCAGAAAGAGAAA GTGGTCGAG GAA CTCGGCCAG ATCTTCGAAAGCTCT rplJ 292423 - 292938 + | 50S ribosomal protein L10 rplL 293008 - 293385 + | 50S ribosomal protein L7/L12 TERM 136 293456 - 293421 - f 71 -11.1 -3.54543 | gap 1, opp_overlap 293419 ATCCATCGGTTGAAA TCGGGCTGGGTCCGGC GGATA GTCGGGCCCAGCC-GA ACCTGTCTCGGCAGA TERM 137 296426 - 296386 - g 77 -4.5 -4.63932 | opp_overlap 296370, overlap 296364 296365 296414 GACGCCGGAAGAAAA GCTCCTCCGCGCCATCTTC GGC GAAAAGGCCTCGGACGTGC GCGACACGTCGCTGC rpoB 293630 - 297763 + | DNA-directed RNA polymerase subunit beta TERM 138 297777 - 297764 - f 71 -9.5 -3.75024 | overlap 297765 GCGGACGAGGAATAA GCCGC GCGG GCGGC CCGGGGCTCAGGCCC TERM 139 298795 - 298741 - g 70 -4.7 -4.4078 | gap 1, overlap 298757 298780 CGTCCGCAACGAAAA GCGGATGCTGCAGGAAGCCGTCGACG CGCT CTTCGACAACGGCC-GCCGCGGCCGC GTCATCACGGGCACC TERM 140 298794 - 298780 - g 70 -12.8 -3.28712 | overlap 298757 298741 CGCGCTCTTCGACAA CGGCCG CCG CGGCCG CGTCATCACGGGCAC rpoC 297845 - 302092 + | DNA-directed RNA polymerase subunit beta' TERM 141 302118 - 302143 + F 100 -21.9 -4.05788 | TCTCGCCTGACCATG GGCCCGCGCAC TCCG GTGCGCGGGCC TTTCCTTTGGGAAAC TERM 142 302204 - 302158 - f 76 -13.4 -3.53012 | overlap 302159 CTTTCCTTTGGGAAA CGCCCCGGGCCGCGCCCGGTGA TGC CCGCCCGCCACGGCCCGCGGCC CCTCCGGCCGAAACA TERM 143 302203 - 302159 - f 74 -16.9 -2.71712 | overlap 302158 TTTCCTTTGGGAAAC GCCCCGGGCCGCGCCCGGTGA TGC CCGCCCGCCACGGCCCGCGGC CCCTCCGGCCGAAAC RSP_1711 302284 - 303210 + | RhaT family protein TERM 144 303297 - 303328 + F 72 -3.6 -4.5394 | gap 1 TCCTCTGGAATTCCA CCAC-GTCGTCCC CGCCAAA GGGACGTCCGCGG TTTTGGTGTTTGTGT rpsL 303423 - 303794 + | 30S ribosomal protein S12 rpsG 303807 - 304277 + | 30S ribosomal protein S7 TERM 145 305858 - 305838 - g 78 -8.9 -4.34488 | overlap 305827 305840 TACACGCACAAGAAA CAGACCGGT GGT ACCGGCCAG TTCGCGCGCGTGAAG TERM 146 305856 - 305840 - g 70 -10.1 -3.76888 | overlap 305838 305827 CACGCACAAGAAACA GACCGGT GGT ACCGGCC AGTTCGCGCGCGTGA fusA1 304302 - 306419 + | elongation factor G tufA 306494 - 307669 + | elongation factor Tu TERM 147 307689 - 307714 + F 76 -13.2 -3.53012 | opp_overlap 307672 CAATTGGCAGAGGGG CGGGGGGACG ATTCCA CGCCCCCCCG TTTCCCGCCAAGCCC rpsJ 307742 - 308050 + | 30S ribosomal protein S10 rplC 308064 - 308786 + | 50S ribosomal protein L3 rplD 308776 - 309396 + | 50S ribosomal protein L4 rplW 309393 - 309689 + | 50S ribosomal protein L23 TERM 148 309707 - 309734 + F 100 -20.6 -4.85599 | opp_overlap 309695 GAAGGCCTGCGAATC TCGCGGCCCCGG GCTT CCGGGGCCGTGA TTTTTATAAACTGGG rplB 309812 - 310651 + | 50S ribosomal protein L2 rpsS 310655 - 310933 + | 30S ribosomal protein S19 TERM 149 310968 - 310954 - g 73 -7 -4.32402 | opp_overlap 310959, overlap 310956 GGGCAAGGAAAAGAA CCCGCG CCG CGTGGG CGAAAACGAGGCTTT rplV 310937 - 311317 + | 50S ribosomal protein L22 rpsC 311317 - 312033 + | 30S ribosomal protein S3 rplP 312048 - 312461 + | 50S ribosomal protein L16 TERM 150 312489 - 312518 + F 100 -22.1 -4.18018 | opp_overlap 312489 GGCGGGCAGGACAGA GGCCCCCGGACGC AGCC GCGCCCGGGGGCC TTTTCAATGAAACAA TERM 151 312518 - 312489 - f 100 -24.3 -2.94099 | opp_overlap 312489 GGCGGGCAGGACAGA GGCCCCCGGACGC AGCC GCGCCCGGGGGCC TTTTCAATGAAACAA rpmC 312701 - 312907 + | 50S ribosomal protein L29 TERM 152 313062 - 313046 - g 72 -11.5 -3.6761 | overlap 313044 TCTGTCGAAGAAATA CCGGGCC CAT GACCCGG AGAACCAATTCAAGG rpsQ 312921 - 313163 + | 30S ribosomal protein S17 rplN 313237 - 313605 + | 50S ribosomal protein L14 rplX 313605 - 313910 + | 50S ribosomal protein L24 rplE 313910 - 314470 + | 50S ribosomal protein L5 rpsN 314490 - 314795 + | 30S ribosomal protein S14 rpsH 314808 - 315206 + | 30S ribosomal protein S8 rplF 315217 - 315750 + | 50S ribosomal protein L6 TERM 153 316018 - 316054 + G 78 -11.5 -4.00532 | CCGAGCGGGCGAAGG CGGCCGGGATCGAAGAG TGC TTCTTCGACCGCGGCGG TTTCCTCTTTCACGG rplR 315762 - 316121 + | 50S ribosomal protein L18 rpsE 316133 - 316696 + | 30S ribosomal protein S5 rpmD 316709 - 316897 + | 50S ribosomal protein L30 TERM 154 316919 - 316945 + F 74 -12.2 -3.59262 | opp_overlap 316918 316917 316915 GCCTTTGAAAACATG GGGCGCGCGG GCTTGCA CCGGGCGCCC TTTCCCCATATCAGG TERM 155 317116 - 317104 - g 75 -10.5 -3.94877 | AGCCCGCAAGAAGAA GCGCG TGG CGCGC GGCCCGGGCTCGGGC TERM 156 317350 - 317302 - g 70 -13.2 -3.35679 | CGGCCTGATCCAGAA GTTCGTCGACG-CCGGCAAGCTGG ACG CCAGCCAGCCGATCGACGA-GAAC GCGATCGTGGCCGCG rplO 317054 - 317539 + | 50S ribosomal protein L15 secY 317640 - 318998 + | preprotein translocase subunit SecY TERM 157 319230 - 319248 + G 73 -13.8 -3.36273 | opp_overlap 319224, overlap 319226 TCGCGAGAAGCTGCA GTCGCCCG CGG CGGGCGGC TTCATCTTCGACGGC adk 319009 - 319662 + | adenylate kinase TERM 158 319713 - 319739 + F 70 -4.3 -4.46212 | gap 1, opp_overlap 319704, overlap 319725 319726 CATAGATCACGGCGT CCCG-CGAGGGA ATCG TCCAGCGACGGG TTTTGTCCTGCGGCG TERM 159 319816 - 319797 - f 84 -4.9 -5.00616 | GTGGTTGTGAAAAAA GGTCCTG GAATTA CGGGACC GCAACAAAAGGAAGA rpsM 319837 - 320205 + | 30S ribosomal protein S13 rpsK 320219 - 320608 + | 30S ribosomal protein S11 TERM 160 320620 - 320657 + F 83 -15.5 -3.66018 | overlap 320621 CTGACCGCACATCCA TTGGGTCGGGCCGCGCC ATCC GGTGCGGCCCGATCGAC TTGTTCAGATCCTCG TERM 161 320621 - 320656 + F 81 -19 -2.79289 | overlap 320620 TGACCGCACATCCAT TGGGTCGGGCCGCGCC ATCC GGTGCGGCCCGATCGA CTTGTTCAGATCCTC TERM 162 321615 - 321578 - g 73 -13.5 -3.36327 | gap 1 CGATCTCATCCAGAA GACCGAAGC-CGAGATGC TCC GCACCCCGAACTTCGGCC GCAAGTCGCTCAACG rpoA 320724 - 321740 + | DNA-directed RNA polymerase subunit alpha TERM 163 321817 - 321795 - f 70 -9 -3.90744 | TCCCGCCCCAAAGAA GCCCGTCGCA CCG CACGTCGGGC AGGACAAAGCATAGG rplQ 321841 - 322260 + | 50S ribosomal protein L17 TERM 164 322286 - 322309 + F 100 -16 -5.61881 | GGTCTTGGCGATTTG GGCCCGTCTC CTCG GAGGCGGGCC TTTTTCTTTTTGGCG RSP_1741 322519 - 323130 + | LuxR family protein RSP_1742 323186 - 324571 + | serine protease RSP_1743 324610 - 325923 + | recombination factor protein RarA RSP_1744 325955 - 326329 + | camphor resistance protein CrcB RSP_1745 326326 - 327366 + | ribosomal large subunit pseudouridine synthase C RSP_1746 327366 - 328073 + | hypothetical protein TERM 165 328280 - 328266 - f 72 -8.5 -4.00042 | CCGGGGATCAAAGAA CCGCC TCAGG GGCGG CAATCAGGAAGAGGT bztA 328300 - 329316 + | ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein bztB 329465 - 330727 + | ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB bztC 330729 - 332057 + | ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC bztD 332070 - 332858 + | ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit bztD TERM 166 332882 - 332905 + F 100 -16 -4.76041 | opp_overlap 332880 TCTGCCGAATTCATG GGCGCCATCC GCAG GGGTGGCGCC TTTTTCGTGCCTCTG RSP_1751 333068 - 333436 + | putative 2Fe-2S ferredoxin protein TERM 167 333609 - 333592 - f 70 -8.4 -3.85698 | TCGCCGCGGTACAAA TGCCGG ACATGA CCGGCA GGAAAGCGCACGCGA RSP_1752 333745 - 334950 + | putative creatinase TERM 168 337029 - 336993 - g 79 -12.8 -3.83205 | ACCTCGGAGATGAAA GCTGGGGCGCCGTGCG CTACC CGCTCGACGCGCCGGC GGAAGGTGCCTGGAT RSP_1753 335207 - 337378 + | hypothetical protein TERM 169 337419 - 337380 - f 89 -19.2 -3.33815 | AGCTTCCGGAATGAA CCTGACACGGCCCCCCGG TGCG CCGGGGGGCCACTTCCGG GACTGGCGGCGCGTG TERM 170 337545 - 337528 - f 70 -8.3 -3.85698 | opp_overlap 337500 337528 CGCGCTTCGCAGAAA GCGGGCC GCGT GGCCCCC GTTCTCCACCGAGCT RSP_1754 337757 - 338566 + | hypothetical protein RSP_1755 338953 - 338612 - | hypothetical protein panB 339118 - 339951 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 339951 - 340790 + | pantothenate synthetase RSP_1758 342208 - 340889 - | succinyl-diaminopimelate desuccinylase RSP_1759 342292 - 342561 + | hypothetical protein RSP_1760 342569 - 343225 + | hypothetical protein TERM 171 343316 - 343287 - T 100 -25.1 -4.07246 | opp_overlap 343287 GGACCCGAAAGGAAA GGCGCCGGAGTCC CCGC GGACTCCGGCGCC TTCGTCTGCGGAGGG TERM 172 343287 - 343316 + T 100 -25.1 -3.25823 | opp_overlap 343287 GGACCCGAAAGGAAA GGCGCCGGAGTCC CCGC GGACTCCGGCGCC TTCGTCTGCGGAGGG pheT 345753 - 343336 - | phenylalanyl-tRNA synthetase subunit beta TERM 173 345840 - 345813 - R 90 -16.3 -3.75153 | gap 1, opp_overlap 345807 345807 GGGCGGGAAGGGAAA GGCCGCGGCGCC TGCGC GG-GCCGCGGCC GTCAACCCTTTCTCC RSP_1762 346859 - 346143 - | hypothetical protein pheS 347975 - 346893 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 174 348157 - 348129 - R 90 -18.2 -3.46602 | gap 1 CCCCGGACATGAGAA GGCCCCGCCACCC GGAC GGGTG-CGGGGCC TGCCCTGAAGCGGTC rplT 348542 - 348180 - | 50S ribosomal protein L20 rpmI 348755 - 348555 - | 50S ribosomal protein L35 pykA 350316 - 348871 - | pyruvate kinase RSP_1767 350457 - 351194 + | N-formylglutamate amidohydrolase TERM 175 351426 - 351394 - T 74 -12 -3.57144 | gap 1, opp_overlap 351400 351425, overlap 351395 351402 CTGCCGACGGCCAAA GCGGAACAGGCGGCC CGTC GGCCGCCCGTTTC-C ATCCGGAAAGGCCTG TERM 176 351400 - 351421 + T 74 -12.9 -3.64703 | opp_overlap 351394 351395 351402 ACGGCCAAAGCGGAA CAGGCGGCC CGTC GGCCGCCCG TTTCCATCCGGAAAG TERM 177 351419 - 351402 - T 72 -14.1 -3.12668 | opp_overlap 351400, overlap 351394 351395 GGCCAAAGCGGAACA GGCGGCC CGTC GGCCGCC CGTTTCCATCCGGAA TERM 178 351520 - 351488 - T 100 -20 -3.64703 | gap 1, opp_overlap 351494 GGCCGGGGACGCAAA GCAGAACGGGCGGCC GAGG GGCCGCCCGTT-TGC ATCGGGGAAGGGATG TERM 179 351494 - 351515 + T 95 -18.7 -3.64703 | opp_overlap 351488 GGACGCAAAGCAGAA CGGGCGGCC GAGG GGCCGCCCG TTTGCATCGGGGAAG RSP_1768 352398 - 351538 - | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase RSP_1769 353363 - 352401 - | mandelate racemase/muconate lactonizing protein RSP_1770 354475 - 353474 - | hypothetical protein RSP_1771 354743 - 355699 + | beta subunit of citrate lyase TERM 180 355757 - 355780 + T 91 -19.6 -3.37493 | opp_overlap 355745 AATCGGGAGGACGCG CGCCCCGGAC CCAG GTCCGGGGCG TTGCTGTGTTCAGAG RSP_6018 356260 - 355790 - | hypothetical protein accA 356475 - 357434 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha RSP_1773 357431 - 357745 + | DMT superfamily multidrug efflux pump RSP_1774 357884 - 359062 + | putative glucose dehydrogenase B RSP_1775 360046 - 359087 - | hypothetical protein greA 360527 - 360057 - | transcription elongation factor greA TERM 181 360582 - 360546 - H 90 -7.2 -5.08824 | overlap 360552 CCTTCACCCAAAAAA CAGAAAGCCACGGCCC GGGCA GGGCCATGACCTTGAG CTTGCGTTCCCCTCA TERM 182 360576 - 360552 - H 91 -11.4 -4.64992 | overlap 360546 CCCAAAAAACAGAAA GCCACGGCCC GGGCA GGGCCATGAC CTTGAGCTTGCGTTC RSP_1777 360800 - 362455 + | putative electron transfer flavoprotein-ubiquinone oxidoreductase precursor TERM 183 362497 - 362467 - f 70 -12.4 -3.29511 | opp_overlap 362464 362468, overlap 362468 GTGAGCCTCTGACAA TCGCGCGAGCGGCC CCC GGCCGTTCCCGCGT CCATTGCCTTGCCTT TERM 184 362496 - 362468 - f 73 -15.9 -2.57564 | opp_overlap 362464 362468, overlap 362467 TGAGCCTCTGACAAT CGCGCGAGCGGCC CCC GGCCGTTCCCGCG TCCATTGCCTTGCCT TERM 185 362468 - 362496 + F 77 -18.1 -2.57192 | opp_overlap 362468 362467, overlap 362464 TGAGCCTCTGACAAT CGCGCGAGCGGCC CCC GGCCGTTCCCGCG TCCATTGCCTTGCCT RSP_1778 362979 - 364256 + | TPR domain-containing protein TERM 186 364738 - 364765 + G 71 -9 -4.08216 | CTGGTGCTGGCGAAC CCCGGCGTGTCG GTGC CGACGCCCCCGG TTTTCAAGGCGCTCG ispE 364249 - 365085 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase RSP_1780 365227 - 365712 + | hypothetical protein RSP_1781 367177 - 365720 - | putative membrane-anchored oxidoreductase, L-sorbosone dehydrogenase RSP_1782 367625 - 367170 - | hypothetical protein RSP_1783 367772 - 368866 + | hypothetical protein RSP_1784 369268 - 368894 - | response regulator receiver domain-containing protein TERM 187 369035 - 369007 - G 73 -13.8 -3.28712 | TCGCGCCGGTCAGAA GCACGAGCGGCA CGCCC CGCCGCTCGAGC ACCTCGATCACCGGC TERM 188 369219 - 369207 - G 72 -3.4 -4.55295 | TGGGCCAGAAAGAAA TCGT CCTCC ACGA CCAGCACCGAACGGC RSP_1785 370645 - 369641 - | LacI family transcription regulator TERM 189 371613 - 371565 - g 70 -13 -3.28924 | gap 1, overlap 371592 371593 CAGCGCCCGGGAGAA GGCCGACGCGGCC-CGCGCCG AGGAGAAG CGCCGCGCGACCGCCGCGGCC GGCGGCTGGGTGCCG TERM 190 372710 - 372763 + G 73 -15.9 -2.87132 | gap 1 TCCTCGGCGTGCGCG GCGCGCGGCTCCTGCTGCGCCGGC CCGACCT GCTGGTGCCGCAGCTGC-GCGCGC TCTATCGCGCGGCGG fruB 370813 - 373329 + | phosphoenolpyruvate--protein phosphotransferase fruK 373326 - 374312 + | 1-phosphofructokinase fruA 374309 - 376054 + | PTS system fructose-specific II BC component TERM 191 376097 - 376126 + T 86 -22.9 -2.64794 | CGCGGGACCGGACCT CGGGGCCGGCACC TCCG GGTGCCGGCTCCG TCATGTCGCATTCCC RSP_1789 376484 - 376158 - | hypothetical protein RSP_1790 376909 - 376484 - | transcriptional regulator RSP_1791 376993 - 379215 + | heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase RSP_1793 379860 - 379339 - | single-strand DNA binding protein TERM 192 379373 - 379429 + g 86 -20.7 -2.87957 | gap 1 TCGAGGTCGTTCCGG CGGCCGCCGCCACTCGGGGCGCCGCC CGAGGA GGCGCCGCCGCGGG-GGCCGCTGCCG TAATTGTCGTAGTTG RSP_1794 380074 - 380688 + | putative lytic transglycosylase serS 382093 - 380801 - | seryl-tRNA synthetase TERM 193 382246 - 382213 - R 81 -18.9 -2.79796 | gap 1 GCCTATTCGATGACA GCGCAGGCGA-GCCGG TCG CCGGCATCGCCTGCGG GCTGGCTCACATAGT sodC 382757 - 382200 - | putative copper/Zinc superoxide dismutase YajC 383049 - 383375 + | protein translocase subunit yajC secD 383391 - 385055 + | preprotein translocase subunit SecD secF 385065 - 386039 + | preprotein translocase subunit SecF RSP_1800 386215 - 386568 + | hypothetical protein ccmA 386636 - 387268 + | cytochrome c biogenesis protein CcmA ccmB 387265 - 387921 + | ABC heme exporter, inner membrane subunit CcmB ccmC 387970 - 388698 + | ABC heme exporter, inner membrane subunit CcmC ccmD 388695 - 388856 + | Heme exporter protein D ccmG 388849 - 389388 + | thiol-disulfide interchange protein TERM 194 389428 - 389456 + T 79 -11.6 -3.9941 | overlap 389432 GCCCCATCGGCTCCC GGGCGCATGGGC CGCCC GTCCGCGCGCCC TTTCATTCTGGCCCA TERM 195 389567 - 389536 - T 100 -20.2 -3.57144 | opp_overlap 389540, overlap 389540 CGCTGGAGCGCCAAA GAAACGCCCCGGCC AGCC GACCGGGGCGTCTC TCGGATCCCTGCGAG TERM 196 389563 - 389540 - T 100 -17.4 -4.42806 | opp_overlap 389540, overlap 389536 GGAGCGCCAAAGAAA CGCCCCGGCC AGCC GACCGGGGCG TCTCTCGGATCCCTG TERM 197 389540 - 389563 + T 72 -15.2 -2.89881 | opp_overlap 389540 389536 GGAGCGCCAAAGAAA CGCCCCGGCC AGCC GACCGGGGCG TCTCTCGGATCCCTG RSP_1806 392271 - 389587 - | aconitate hydratase RSP_1807 392493 - 393200 + | hypothetical protein RSP_6019 394433 - 393375 - | hypothetical protein trpS 395503 - 394430 - | tryptophanyl-tRNA synthetase mviN 397825 - 396284 - | putative virulence factor, MviN TERM 198 396500 - 396467 - G 80 -16.7 -3.15861 | gap 1, opp_overlap 396474, overlap 396469 CACCAGTCCCATGAA CAGCGCGGCCACCACG ATC CGCGGCAGCCGCGC-G CGCAGCCGCTCGTCG TERM 199 396499 - 396469 - G 87 -20.4 -3.14051 | opp_overlap 396474, overlap 396467 CCAGTCCCATGAACA GCGCGGCCACCACG ATC CGCGGCAGCCGCGC GCGCAGCCGCTCGTC TERM 200 397434 - 397424 - G 76 -8.2 -4.30809 | overlap 397425 GAAGATGTAGGAAAA GGCG ATG CGCC CGAACTCGACCGCGA glnD 400614 - 397822 - | PII uridylyl-transferase RSP_1812 401773 - 400598 - | hypothetical protein TERM 201 400829 - 400795 - G 70 -13.4 -3.28712 | CGCCGCGCTTGAGAA GCGCCCCCACGGCGGC GAC GCCGTCGTAGGCGAGC CCCGAGATCGGATGC RSP_1813 401856 - 402743 + | hypothetical protein TERM 202 402949 - 402910 - g 75 -13.4 -3.65522 | overlap 402912 CATCGAGGTCAAGAA GAGCACGAGCCATGCCGC CGCC GCGGCCCGGCTCTCGCGC CGGCAGATGGACCGC TERM 203 402947 - 402912 - g 75 -14.6 -3.40611 | overlap 402910 TCGAGGTCAAGAAGA GCACGAGCCATGCCGC CGCC GCGGCCCGGCTCTCGC GCCGGCAGATGGACC RSP_1814 402740 - 403093 + | hypothetical protein gshB 403146 - 404096 + | glutathione synthetase RSP_1816 405999 - 404461 - | Mg chelatase-related protein RSP_1817 406324 - 406088 - | hypothetical protein TERM 204 406347 - 406379 + r 72 -13.4 -3.14344 | gap 1 CAGGCTCCGGCGGGG GCGGAGCGGGAGGCG CCGG TGCC-CCCGATCCGC TTCATGACGAGGATG feoB 408643 - 406331 - | Fe2+ transport system protein B feoA1 408879 - 408640 - | ferrous iron transport protein A feoA2 409134 - 408886 - | ferrous iron transport protein A RSP_1820 410245 - 409736 - | hypothetical protein TERM 205 410381 - 410352 - R 100 -20.1 -3.51825 | CCACCGGAATGAGAA CATCCGGCGGAGG AGGA CCTCCACCGGATG CGAGAGCCGCCGGCC RSP_1821 412729 - 410429 - | molybdopterin-containing oxidoreductase, formate dehydrogenase RSP_1822 412976 - 414520 + | NH(3)-dependent NAD(+) synthetase mogA 415088 - 414543 - | molybdenum cofactor biosynthesis protein TERM 206 415181 - 415197 + H 70 -3.5 -4.52589 | overlap 415182 415183 GACGGGCGGGGCTGC CACGGCG GGC CGCCGAA TTTTGTCTGCAGGGG TERM 207 415570 - 415546 - g 70 -13.6 -3.14132 | gap 1 CCTGTCGGTCATCAA CGGCACGCGGC GGCG GCCGC-TGCCG ATGGTGCTCGGCCAC TERM 208 416249 - 416205 - g 72 -12.8 -3.53012 | gap 1 TCCGGGCGCTCGAAA CCGCCTTCGCCGTCAC-CCGC CGCG GCGGCATGACGGTGACCGCGG GCCTGCCCCACCCGG adh 415379 - 416503 + | Zinc-containing alcohol dehydrogenase TERM 209 416492 - 416548 + T 77 -15.2 -3.14132 | gap 3, opp_overlap 416439 ATCCGGCAGGTGGTG GACCT--CGGCTGACGCGGCGCGACCC GGCCCG GGGTGGCGCCGCG-CGGCCGTCAGGCC TTGCTGCCGCCGACC tldD 417963 - 416542 - | microcin-processing peptidase 2 coxII 418133 - 419044 + | cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2) TERM 210 419278 - 419319 + G 76 -17.3 -2.78384 | overlap 419269 CGCTGACGGGGATCC TGTTCATCGCGCTCGGTGC CGGG GCCTCGGGCGCGCTGAACA TGTGGTGGGACGAGG cox10 419115 - 420047 + | protoheme IX farnesyltransferase RSP_6021 420049 - 420225 + | hypothetical protein cox11 420222 - 420797 + | cytochrome C oxidase assembly protein coxIII 420825 - 421625 + | cytochrome c oxidase, aa3-type, subunit III TERM 211 421802 - 421781 - f 100 -18.7 -3.96148 | opp_overlap 421781 CCCCGGGATCAGAAA GCGCGGGCC GCGA GGCCCGCGC TTTCCGCATCGAGGA TERM 212 421781 - 421802 + F 95 -18.7 -3.57144 | opp_overlap 421781 CCCCGGGATCAGAAA GCGCGGGCC GCGA GGCCCGCGC TTTCCGCATCGAGGA surf-1 421826 - 422497 + | Surf1 protein thrC 422509 - 423894 + | threonine synthase RSP_1832 423891 - 425150 + | M16 family peptidase RSP_1833 425150 - 425734 + | putative ribosomal-protein-alanine acetyltransferase TERM 213 425849 - 425802 - f 72 -8.3 -3.9941 | gap 2, opp_overlap 425800 TGGGCCAGAATGAAA GCCGGAAGGGCGCGGGGCGCGAG GCTT CGTGCGGTCCGCGC-CTTC-GGC AGGATTTCTTTATCT TERM 214 426725 - 426749 + G 70 -10 -3.86015 | GCTGCCGATGCACTG GTTCTCGGGC CGCTC GCTCGAGAGC TTTCTGGGCGAGATG RSP_1834 426069 - 426875 + | hypothetical protein RSP_1835 426908 - 428329 + | putative FAD dependent oxidoreductase TERM 215 428365 - 428341 - T 100 -20 -4.2717 | ATGAGGCCACGAAAA GCCCCGCCGG AGCGA CCGGCGGGGC GAGGTTGGGGTTGAG apt 428994 - 428458 - | adenine phosphoribosyltransferase RSP_1837 429871 - 428999 - | 5'-methylthioadenosine phosphorylase TERM 216 429942 - 429930 - R 72 -4.7 -4.46212 | GCCCGGAGGAGAAAA GCGCG AAC CCCGC CCGACCGGGTGCGAT RSP_1838 430760 - 430176 - | hypothetical protein TERM 217 430945 - 430982 + G 71 -8.3 -4.07568 | gap 1 CTCCTCCTACCGGCT GCGCGACGGGGT-GCCCA CCG TGGCCGACCTCTGCGCGC TTTTGCGCGACGAGG RSP_1839 430841 - 431326 + | GNAT family acetyltransferase RSP_1840 431545 - 432309 + | hypothetical protein RSP_1841 432959 - 432357 - | intracellular septation protein RSP_1842 433876 - 432971 - | drug/metabolite exporter (DME) family protein ftsY 435173 - 433992 - | Signal recognition particle-docking protein FtsY RSP_1844 435329 - 435727 + | hypothetical protein xseA 437407 - 435848 - | exodeoxyribonuclease VII large subunit RSP_1846 437991 - 437638 - | hypothetical protein PurD 438151 - 439413 + | phosphoribosylamine--glycine ligase RSP_1848 441141 - 439615 - | pyruvate kinase TERM 218 441798 - 441830 + G 72 -13.4 -3.54935 | gap 1, overlap 441802 CGGATCACGACGCTG GGCCGCGGCGGCTCG GACA CGA-CGGCCGTGGCC TTTGCCGCCGCTTTC RSP_1849 441351 - 442610 + | aspartate kinase TERM 219 443320 - 443292 - g 70 -13.8 -3.14468 | opp_overlap 443299 443300 GTGCACGAGACCGAA CGCATCCGCGCC GCCGT GGCGCAGCTGCG CGTCTCGGTCGACGA ptsI 442635 - 444878 + | phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr) metZ 445037 - 446251 + | O-succinylhomoserine sulfhydrylase RSP_1852 446347 - 447426 + | putative GTP cyclohydrolase TrkH2 447477 - 448925 + | potassium uptake transporter, transmembrane component, TrkH trkH3 448968 - 450422 + | potassium uptake transporter, transmembrane component, TrkH TERM 220 450456 - 450486 + T 87 -17.5 -3.37344 | ACGGGGGAGGGGGCA GGGCCGCGCCCGG CCGCC CCGGGCGAGGCTC TTCGTTCAGTCCCAG RSP_1855 452273 - 450492 - | hypothetical protein glyQ 452398 - 453321 + | glycyl-tRNA synthetase subunit alpha TERM 221 453717 - 453734 + G 72 -12.7 -3.53012 | opp_overlap 453703 453701 453698, overlap 453699 453721 ATTGCCCCCGGGGTG GACCGCG TGGT CGCGGTC TTTCCCGACGGCCAC RSP_1857 453318 - 453788 + | hypothetical protein TERM 222 454531 - 454576 + G 76 -8.9 -4.16842 | gap 1, overlap 454532 TCTCCGAGGTCGCGG GCCTCGTCGAATG-GCCCGTCG TGC TGATGGGCGCCATCGGCGAGGA TTTCTTGGGCCTCCC glyS 453792 - 455885 + | glycyl-tRNA synthetase subunit beta ppdK 456004 - 458550 + | pyruvate phosphate dikinase TERM 223 458626 - 458605 - f 72 -13.7 -3.14132 | GTGGCGCGGGAGCAA CACCGGCGG GAAC CCGCCGATG GATGCCCCTGCTGAC RSP_1860 458768 - 459490 + | hypothetical protein RSP_1861 459590 - 460492 + | dihydroneopterin aldolase TERM 224 460571 - 460613 + G 73 -14.1 -3.39784 | gap 2, overlap 460569 ATCCCGCTCGCCGAT GCGGCCCGCC-CCGAG-GGCG CGC TGCCGCTCGCCGGCGGTCCGC TGTTCTTCGACCTCG RSP_1862 460538 - 461575 + | dihydropteroate synthase RSP_1863 461572 - 462915 + | phosphoglucosamine mutase RSP_1864 463014 - 463232 + | hypothetical protein TERM 225 463254 - 463286 + T 85 -16.4 -3.57144 | gap 1, opp_overlap 463262, overlap 463255 463262 CCAGACGGGACCCGA TGCAGAAAGGCGCCC CGAG GGGCGCCTTTC-GCG TTTCCGAGTGCCGCC TERM 226 463255 - 463285 + T 78 -17.7 -2.74144 | gap 1, opp_overlap 463262, overlap 463254 463262 CAGACGGGACCCGAT GCAGAAAGGCGCCC CGAG GGGCGCCTTTC-GC GTTTCCGAGTGCCGC TERM 227 463279 - 463262 - T 86 -14.1 -3.92373 | opp_overlap 463255 463254 463262 GACCCGATGCAGAAA GGCGCCC CGAG GGGCGCC TTTCGCGTTTCCGAG TERM 228 463262 - 463279 + T 82 -14.1 -3.71649 | opp_overlap 463262, overlap 463255 463254 GACCCGATGCAGAAA GGCGCCC CGAG GGGCGCC TTTCGCGTTTCCGAG RSP_1865 464327 - 463305 - | ketol-acid reductoisomerase RSP_1866 464457 - 464912 + | AsnC family transcriptional regulator RSP_1867 464909 - 465367 + | AsnC family transcriptional regulator TERM 229 465461 - 465479 + F 72 -4.4 -4.62069 | overlap 465442 GGCCGCGGAGGGGCG GGGCGGAC CTT GTGCGACC TTTTTCAGGTGGCGC RSP_1868 465545 - 466672 + | serine-pyruvate aminotransferase RSP_1869 467876 - 466677 - | 2-octaprenyl-6-methoxyphenyl hydroxylase RSP_6022 468158 - 467928 - | hypothetical protein RSP_1870 468886 - 468239 - | hydrolase RSP_1871 469002 - 469637 + | GntR family transcriptional regulator RSP_1872 471459 - 469645 - | glycosyl transferase family protein RSP_1873 472574 - 471693 - | hypothetical protein TERM 230 472635 - 472590 - R 91 -20.4 -3.28712 | opp_overlap 472592, overlap 472592 472593 TTGGTTCCGGCACAA CAGTGCGAGGCCCGCCGCGA ACTCTG TCGCGGCGGGCCTCGGAAAG GGCCGAACGGGTGGG TERM 231 472633 - 472592 - R 93 -21.6 -3.21276 | opp_overlap 472592, overlap 472590 472593 GGTTCCGGCACAACA GTGCGAGGCCCGCCGCGA ACTCTG TCGCGGCGGGCCTCGGAA AGGGCCGAACGGGTG TERM 232 472632 - 472593 - R 95 -25.1 -2.52623 | opp_overlap 472592, overlap 472592 472590 GTTCCGGCACAACAG TGCGAGGCCCGCCGCGA ACTCTG TCGCGGCGGGCCTCGGA AAGGGCCGAACGGGT carA 473819 - 472656 - | carbamoyl phosphate synthase small subunit RSP_1875 473997 - 474455 + | hypothetical protein RSP_1876 475294 - 474764 - | hypothetical protein TERM 233 475265 - 475244 - G 91 -17.3 -3.84246 | CCCCGAACGAGGAAA GGCCCCGGA TGTC TCCGGGGCC TTCGGGGCAATGACC coxI 477008 - 475308 - | cytochrome c oxidase, aa3 type, subunit I TERM 234 476098 - 476060 - G 70 -14.6 -2.90212 | opp_overlap 476057 476073, overlap 476071 476073 CCACCATCGCATAGA CCATCGGCAAATAGCCGA AGA TCGGCTTTTTGGCGAAGG TCGCGATGACGTGGC TERM 235 476073 - 476085 + g 81 -9.1 -4.57073 | opp_overlap 476071 476060 476073, overlap 476057 GACCATCGGCAAATA GCCGA AGA TCGGC TTTTTGGCGAAGGTC lipB 478079 - 477423 - | lipoyltransferase TERM 236 478771 - 478800 + G 75 -14.9 -3.29144 | TGCCGGTGGCCCCCG CGGCGGCCGCAGC CGGG GCTGCCGCAGCCG TTCTGCCGGAGCTGC RSP_1880 478176 - 479735 + | hypothetical protein TERM 237 479738 - 479779 + F 91 -12.1 -4.57569 | overlap 479741 479776 TCTGGGCCAGTGACT TGAGCGCGAGGGGCCGGCG GGCT CGCCGGCTCCTCGAAGGCA TTTTTGACGCGGTGC TERM 238 479958 - 479993 + F 100 -19 -4.07568 | opp_overlap 479957, overlap 479966 ATTCTTCTGACGAAG CGCCCAAGGGCGGCCT CTCC GGGCCGCCTTTTGGCG TTTTCGGGCCCCGGC TERM 239 479966 - 479985 + F 88 -12.8 -4.28049 | opp_overlap 479957, overlap 479958 GACGAAGCGCCCAAG GGCGGCCT CTCC GGGCCGCC TTTTGGCGTTTTCGG TERM 240 480318 - 480288 - g 81 -2.4 -5.04987 | overlap 480289 480292 480317 AACATGTGCAAAAAA GCTATGATGGCGAG ACG CTCGTCGTCAAAGA TCTCAACCTGACGAT RSP_1882 480233 - 481336 + | ABC polyamine/opine transporter, ATPase subunit RSP_1883 481391 - 482482 + | ABC polyamine/opine transporter, periplasmic substrate-binding protein RSP_1884 482534 - 483808 + | ABC polyamine/opine transporter, inner membrane subunit RSP_1886 483887 - 484795 + | ABC polyamine/opine transporter, inner membrane subunit TERM 241 484817 - 484847 + F 100 -21.9 -3.74077 | CGCTAGCCATTTCGG GGCCCGTCCGGCA TCCCC TGCCGGGCGGGCC TTTCCATCTGTCGGG rpmG 484975 - 485142 + | 50S ribosomal protein L33 TERM 242 485169 - 485191 + F 82 -14.8 -3.47349 | opp_overlap 485169, overlap 485162 CCTGTTCGCGGACAA GGCCGTGCCT CCG GGGCGCGGCC TTCTGCATTTGAGGA RSP_1888 485217 - 485702 + | acetyltransferase TERM 243 485728 - 485707 - T 100 -17.3 -4.77036 | opp_overlap 485704 485690, overlap 485722 GCGCACCATGAAAAA GGGCCGGTC CGAA GACCGGCCC CCGTTCGTGGCGTCC RSP_1889 486493 - 485753 - | hypothetical protein TERM 244 486226 - 486200 - G 89 -7.2 -4.99638 | ATAGGCATAGAAAAA CAGCTGCGCC GCCGCCT GGCTCAGCCG GTTCAGCACGGCGCC RSP_6024 486854 - 486624 - | hypothetical protein TERM 245 487121 - 487173 + G 70 -12.7 -3.34962 | gap 3, opp_overlap 487108 GACGCTCGATCTGGC GCTGCTCGACCG-GTCGG-C-GCGCC GGGT GGCGCTGACCGCCGCGGGAGAGCAGC TTCTGGGCTATGCGC RSP_1890 486939 - 487907 + | LysR family transcriptional regulator RSP_1891 488874 - 487915 - | Zinc-binding dehydrogenase RSP_1892 489235 - 489597 + | XRE family transcriptional regulator RSP_1893 489686 - 490486 + | inositol monophosphatase family protein RSP_1894 490925 - 491314 + | hypothetical protein RSP_1895 491614 - 493977 + | small-conductance mechanosensitive ion channel TERM 246 494016 - 493991 - T 77 -17.5 -2.62933 | GAAGGGGGGAGAGCA GGGGCCGCGCC TCTC GGCGCGGCCCG CCGGTCAGCCGCGGG RSP_1896 495322 - 494021 - | guanine deaminase mgtE 495484 - 496818 + | Mg/Co/Ni transporter, MgtE RSP_1898 496815 - 497369 + | putative 5-formyltetrahydrofolate cyclo-ligase RSP_1899 498681 - 497371 - | ATPase RSP_1900 499200 - 498697 - | hypothetical protein RSP_1901 500051 - 499203 - | TPR repeat-containing protein RSP_1902 500655 - 500089 - | TPR repeat-containing protein RSP_1903 501642 - 500662 - | putative Flp pilus assembly protein TadC RSP_1904 502614 - 501646 - | putative Flp pilus assembly protein TadB RSP_1905 504079 - 502622 - | putative Flp pilus assembly protein ATPase CpaF RSP_1907 505371 - 504100 - | putative Flp pilus assembly protein ATPase CpaE TERM 247 505081 - 505105 + g 76 -7.2 -4.41494 | gap 1 CGGGCTCACCTGGTT GGCGAT-GAGG ATGA CCTTGATCGCC TTTTCCTTGGCGGTG RSP_1908 506359 - 505718 - | OmpA/MotB family outer membrane protein RSP_1909 507750 - 506365 - | Outer membrane general secretion pathway protein, secretin TERM 248 507935 - 507910 - R 73 -12.6 -3.53012 | gap 1, overlap 507887 TTCCCGGCGCGCAAA GCCGCTGCCCG GCGCA CGGG-AGCGGC TTGCCGTGGGATGCA RSP_1910 508828 - 508004 - | putative Flp pilus assembly protein CpaB RSP_6219 509101 - 508898 - | hypothetical protein TERM 249 509174 - 509147 - R 71 -11.3 -3.59979 | gap 1, opp_overlap 509142 509136 TCGGGCCAGTGTAAA TGCGCGGC-GCC TGTAG AGCTGCCGCGCA CTCGCTGACTTGTCC RSP_6025 509608 - 509291 - | hypothetical protein RSP_1911 509868 - 510758 + | soluble lytic murein transglycosylase RSP_1912 511056 - 510817 - | hypothetical protein TERM 250 511079 - 511060 - R 75 -16.4 -2.94099 | GCGGCGGATCACATA GCGGCCCC TGGC GGGGCCGC TCTCGCGCTCGATGA RSP_1913 511729 - 511100 - | butyryl-CoA:acetate CoA transferase RSP_1914 512443 - 511745 - | 3-ketoacid CoA transferase alpha subunit TERM 251 512573 - 512591 + H 72 -5.8 -4.27584 | overlap 512541 CGCGACGGATCGGCC GGCGGGCG GGG CGCCCCAC TTTTCCCTTGCCGGT RSP_1915 512992 - 513915 + | LysR family transcriptional regulator RSP_6026 514576 - 514055 - | putative acetyltransferase TERM 252 514450 - 514411 - G 79 -15.7 -3.28791 | gap 1, overlap 514414 AGTCCGCCCCGAGAA GCAGCAGATCGGGCGCGC GGAGG GCGCGCTCGATCAGC-GC CGCGGCCTGGCCCGG TERM 253 514448 - 514414 - G 76 -17.1 -2.82623 | overlap 514411 CCGCCCCGAGAAGCA GCAGATCGGGCGCGC GGAGG GCGCGCTCGATCAGC GCCGCGGCCTGGCCC RSP_1916 515169 - 514570 - | 2-hydroxychromene-2-carboxylate isomerase RSP_1917 515684 - 515166 - | hypothetical protein TERM 254 515218 - 515232 + g 79 -12.8 -3.80893 | opp_overlap 515191 515217 GTGGTGCGGAAGGAG GCGGCG ACC CGCCGC TTTGCCTTGTCGCCT RSP_1918 515824 - 516801 + | alpha/beta hydrolase TERM 255 516975 - 516997 + G 74 -4.1 -4.57569 | gap 1 GATCGGCGGACCGGG GTGGCACGGT CAGG ACCG-GCAAC TTTTTGCAGAGCTCA RSP_1919 516829 - 517374 + | hypothetical protein RSP_1920 518233 - 517418 - | pyridoxal kinase RSP_1921 518964 - 518284 - | MOSC domain-containing protein RSP_1922 519356 - 520768 + | GntR family transcriptional regulator bioB 521756 - 520770 - | biotin synthase RSP_1924 522190 - 521753 - | BioY family protein RSP_1925 523062 - 522394 - | GntR family transcriptional regulator TERM 256 524448 - 524477 + G 77 -11.3 -4.07568 | gap 1 GCATCCTCTCCGAGG GCGC-CGCCCGGCC CGG GGCAGGGCTCGCGC TTTTCGACGAGGCGC RSP_1926 523580 - 524521 + | tRNA-dihydrouridine synthase A RSP_1927 524602 - 525420 + | hypothetical protein TERM 257 525593 - 525559 - T 72 -6.2 -4.36914 | CGGGTCGGGATAAAA GCGCCCTGCCACGCAA GAG CCGGAAGGCACGGCGC AAAGGGCACCTGTCG dnaB 527225 - 525735 - | replicative DNA helicase pyrE 528192 - 527494 - | orotate phosphoribosyltransferase pyrC 529275 - 528235 - | dihydroorotase RSP_1931 529420 - 530334 + | AAA family ATPase RSP_1932 530439 - 531635 + | hypothetical protein RSP_6241 531708 - 532184 + | hypothetical protein TERM 258 532213 - 532236 + F 100 -21 -5.26875 | AGAAGCCTTACTCCT GCCGCCGCCC GATT GGGCGGCGGC TTTTTTCATTCCACG RSP_1933 532399 - 534504 + | OmpA/MotB family outer membrane protein RSP_1934 534620 - 535021 + | sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis RSP_1935 535062 - 535592 + | sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis RSP_1936 535592 - 536596 + | molybdopterin biosynthesis protein TERM 259 536640 - 536624 - T 88 -15.1 -3.7732 | opp_overlap 536624 CCCGGACATGAAGAA GGGGGCC GCC GGCCCCC TTGCTTCGGCTCATC TERM 260 536624 - 536640 + T 79 -15.1 -3.36289 | opp_overlap 536624 CCCGGACATGAAGAA GGGGGCC GCC GGCCCCC TTGCTTCGGCTCATC infC 537252 - 536668 - | translation initiation factor IF-3 RSP_1938 537327 - 538013 + | hypothetical protein TERM 261 538113 - 538075 - T 100 -20.2 -3.61764 | opp_overlap 538076 538077 538080, overlap 538080 TCACGAAGCGCGAAA TGCAAGACCGCCGCGCGG GGT CCGCGCGGCGGTCTGGGT TGTCTCGGCGATCTT TERM 262 538076 - 538112 + T 100 -23.7 -3.49102 | opp_overlap 538075 538080, overlap 538077 538080 CACGAAGCGCGAAAT GCAAGACCGCCGCGCGG GGT CCGCGCGGCGGTCTGGG TTGTCTCGGCGATCT TERM 263 538077 - 538111 + T 95 -27.2 -2.6914 | opp_overlap 538075 538080, overlap 538076 538080 ACGAAGCGCGAAATG CAAGACCGCCGCGCGG GGT CCGCGCGGCGGTCTGG GTTGTCTCGGCGATC TERM 264 538108 - 538080 - T 100 -27.5 -3.28269 | opp_overlap 538077 538076 538080, overlap 538075 AAGCGCGAAATGCAA GACCGCCGCGCGG GGT CCGCGCGGCGGTC TGGGTTGTCTCGGCG TERM 265 538080 - 538108 + T 95 -27.5 -2.63079 | opp_overlap 538080 538075, overlap 538077 538076 AAGCGCGAAATGCAA GACCGCCGCGCGG GGT CCGCGCGGCGGTC TGGGTTGTCTCGGCG RSP_1939 538933 - 538127 - | NADPH-ferredoxin reductase TERM 266 538984 - 538968 - R 78 -8.7 -4.25104 | GCTCTTTCAGTAAAA CTTCGCA CCC CGCGAAG AAAGGCCGGAATCAG RSP_1940 539403 - 538996 - | hypothetical protein cysH 540116 - 539400 - | phosphoadenosine phosphosulfate reductase RSP_1942 541815 - 540145 - | sulfite/nitrite reductase hemoprotein subunit RSP_1943 542147 - 541842 - | hypothetical protein RSP_1944 542908 - 542144 - | uroporphyrinogen-III C-methyltransferase RSP_1945 543051 - 543512 + | AsnC family transcriptional regulator RSP_1946 544864 - 543683 - | cytochrome P450 hydroxylase cbbJ 545930 - 545193 - | triosephosphate isomerase RSP_1948 546398 - 546042 - | hypothetical protein RSP_1949 546844 - 546482 - | hypothetical protein RSP_1950 547132 - 547935 + | hypothetical protein RSP_1951 548555 - 548205 - | hypothetical protein TERM 267 548533 - 548502 - G 79 -17.4 -3.13403 | gap 1, overlap 548485 548505 TCTTTCGGATGAAGA GAACCGC-GCAGCCT GAC AGGCCGCTGCGGTTC GAATGAAAGCGGGCA TERM 268 548530 - 548505 - G 75 -13.3 -3.71284 | gap 1, overlap 548502 TTCGGATGAAGAGAA CCGC-GCAGCCT GAC AGGCCGCTGCGG TTCGAATGAAAGCGG TERM 269 548565 - 548542 - G 75 -11 -3.90112 | gap 1, opp_overlap 548542 GCGGTTCGAATGAAA GC-GGGCAGCT TCA AGCCGCCCCGC TTTCCGATCTCAGCA RSP_1952 548822 - 548589 - | cold-shock DNA-binding protein family protein TERM 270 548995 - 548958 - R 72 -8.4 -4.09864 | AGCCATGGTGGAAAA TCGCTCGCCGTAAAGA TGCGGG TCCTTTCGGCAGGCGA GGGTGGACCCGGCAG RSP_1953 550153 - 549413 - | Crp/FNR family transcriptional regulator TERM 271 549724 - 549687 - G 76 -9 -4.2461 | gap 1, overlap 549688 AGTTCGAGGAAGAAA TGCGCCAGCCGCTCTCG CGGGC CGCG-GCGGCCGACGCC CACCAGATGCTCGAC RSP_1954 550280 - 550546 + | hypothetical protein TERM 272 550650 - 550681 + G 76 -16.6 -2.70932 | opp_overlap 550675, overlap 550644 TGTTTTCATGACGGC GGACCGGCTCTTCC GAGA GGAAGGACCGGTCC TCATTCCCGGGGGCA RSP_1955 550603 - 551391 + | hypothetical protein TERM 273 551683 - 551711 + F 78 -16.8 -3.02511 | opp_overlap 551672 ATCACGATCGAGCGC TCGATCGGGCGC GAGCG GCGTCCGATCGA TCTTCGCGCCCTCGA RSP_1956 551878 - 552252 + | hypothetical protein RSP_1957 552570 - 552259 - | hypothetical protein TERM 274 553578 - 553592 + H 84 -10 -4.49311 | opp_overlap 553578 CGTTCGTCGGGAAAA CGATCC ACC GGATCG TTTTCTGATCCTCCT TERM 275 553592 - 553578 - H 75 -10 -4.07568 | opp_overlap 553578 CGTTCGTCGGGAAAA CGATCC ACC GGATCG TTTTCTGATCCTCCT RSP_1961 554166 - 554417 + | hypothetical protein RSP_1962 554720 - 555148 + | hypothetical protein RSP_1963 555742 - 555305 - | hypothetical protein TERM 276 555825 - 555775 - R 73 -12.4 -3.53012 | gap 1, overlap 555776 555778 CTGCGGGGCGTCAAA CCAGCCGTGGCGGCGCGAGCGGC CTGACT GCCGCT-GCGCTGCGCCGGCCGC GGCAGTTCGGCTTGC TERM 277 555824 - 555776 - R 74 -15.9 -2.71712 | gap 1, overlap 555775 555778 TGCGGGGCGTCAAAC CAGCCGTGGCGGCGCGAGCGGC CTGACT GCCGCT-GCGCTGCGCCGGCCG CGGCAGTTCGGCTTG TERM 278 555822 - 555778 - R 72 -14.9 -2.90496 | gap 1, overlap 555776 555775 CGGGGCGTCAAACCA GCCGTGGCGGCGCGAGCGGC CTGACT GCCGCT-GCGCTGCGCCGGC CGCGGCAGTTCGGCT RSP_1964 556060 - 555770 - | hypothetical protein RSP_1965 556550 - 557740 + | putative membrane fusion protein family member TERM 279 558316 - 558290 - f 73 -8 -4.11216 | gap 2, overlap 558291 CTTCCATCTGTAAAA GGC--CGGCGGC TGGTC GCCGCCGAAGCC AATCCTCGGGACCGC RSP_1967 558385 - 558684 + | hypothetical protein RSP_1966 559536 - 558661 - | ISSod13, transposase TERM 280 560355 - 560328 - g 75 -13.4 -3.60627 | gap 1 GCACGGCATCCGAAA GGCCGCGGCGGAG TTG CTC-GCCGAGGCC GGATGCACCCAGCAC RSP_1968 559600 - 560490 + | integrase/recombinase TERM 281 561034 - 561051 + G 80 -3.4 -4.77759 | gap 1 AACGATCTCGTCTGC CAG-GGC GCAGA GCCGCTG TTTTTCCTAGATTAT purM 560737 - 561783 + | phosphoribosylaminoimidazole synthetase RSP_1970 561822 - 562370 + | phosphoribosylglycinamide formyltransferase TERM 282 562379 - 562389 + F 78 -8.2 -4.32046 | opp_overlap 562379, overlap 562359 GGACTGATCCCAACA GCCC ATC GGGC TTTCCTTTTTCCCCG rnd 562467 - 563624 + | ribonuclease D RSP_1972 564113 - 563661 - | hypothetical protein RSP_1973 564243 - 564671 + | SufE protein RSP_1974 565041 - 564694 - | hypothetical protein RSP_1975 566898 - 565102 - | aminopeptidase P TERM 283 566851 - 566804 - G 85 -15.4 -3.78775 | gap 1 CGCGGCACGAGGAAA CCGGCCAGCCCCTCGGCGGTCAG CGC CTG-CCGCAGGGCGGCAAGCCGG GCCGGCCCCTGAGCC cobT 568757 - 566898 - | aerobic cobalt chelatase, CobT subunit TERM 284 567092 - 567104 + g 72 -3.4 -4.60041 | overlap 567081 567080 CGACCATCGCGATCA CATC GCGGA GATG TTTTTCAAGATAGCT TERM 285 568787 - 568771 - R 79 -11.5 -4.03413 | ATGGCTTCAGATAAA GCACCCG GAC CGGGCGC GGACAAGGGGAGAGA RSP_6027 569138 - 568809 - | hypothetical protein RSP_6028 569469 - 569140 - | hypothetical protein cobS 570560 - 569466 - | hydrogenobyrinic acid a,c-diamide cobaltochelatase RSP_1978 571241 - 570606 - | DnaJ family molecular chaperone RSP_1979 571316 - 571573 + | stress induced morphogen, BolA glcB 573898 - 571682 - | malate synthase G RSP_1981 575305 - 573941 - | deoxyribodipyrimidine photo-lyase type I TERM 286 574571 - 574514 - G 73 -14.1 -3.34517 | gap 3, overlap 574560 AGTCTGGTCCAAATA TCCTCGGGGGG-AG-CCGCCCCCTCCGG GGCGG CCGG-GGGGGCAGACAGCCCCCCGCGCA CCGGGGGCACCCGAA RSP_1982 575763 - 578318 + | aminopeptidase N TERM 287 579178 - 579150 - g 72 -11.7 -3.62046 | overlap 579151 579153 CGAGGTGCTGAACAA GCATCGCCAGCCG TTC CGACTGACGATGG GCCGGCCGATCCCGG sqdA 578452 - 579336 + | phospholipid/glycerol acyltransferase TERM 288 579427 - 579445 + F 72 -5.8 -4.32034 | overlap 579409 579428 GTCGCCGCTGCGTTC CGGCAGCC GCG GGCGGCCA TTTTCCTCATGCTCC RSP_1984 579524 - 580669 + | histidinol-phosphate aminotransferase RSP_1985 581134 - 580691 - | hypothetical protein gatB 582807 - 581296 - | aspartyl/glutamyl-tRNA amidotransferase subunit B RSP_1987 582976 - 583572 + | hypothetical protein RSP_1988 583920 - 583576 - | hypothetical protein TERM 289 583973 - 583957 - R 74 -15.1 -3.05384 | GCCCGTGTCAGGCAA GGGCGGC GCT GCCGCCC CCGCCGGTCCCGCTC valS 586950 - 583987 - | valyl-tRNA synthetase RSP_1990 587500 - 587069 - | AsnC family transcriptional regulator TERM 290 587936 - 587905 - g 73 -13.6 -3.35679 | GGTGGTGATCGAGAA CCTCGCCGCCGCGG GGAT CCGCGGCTACGACG TGGCCTCGCCCCACG RSP_1991 587720 - 588865 + | putative ornithine decarboxylase TERM 291 588895 - 588918 + F 100 -13.1 -5.52023 | opp_overlap 588895 588894 TGTGATATTTTAAAG CCCGGCCGG AACCTC CCGGTCGGG TTTTTTCTTCATCCT RSP_1992 588944 - 590125 + | hypothetical protein RSP_1993 590629 - 590153 - | hypothetical protein TERM 292 590938 - 590917 - R 95 -18.7 -3.75153 | opp_overlap 590911 GTCTCCGAATGCAAA CGGCGGCCC CGAA GGGCCGCCG CCGGACATTCCGTGT gltA 592248 - 590962 - | citrate synthase gltX 593770 - 592355 - | glutamyl-tRNA synthetase TERM 293 592428 - 592477 + g 87 -17.7 -3.53091 | ATCATGTCGTAGACG CTGGGCGTCACCGTGCGCCCGGC AAGG GCTGTGCGCAAGGGGGCGGCCAG TTTCCCGAAGCCCAT TERM 294 593951 - 593970 + G 71 -7 -4.20696 | overlap 593927 GCCGGTCGAGGCACT GGCGGCCG CCCG CGGCTTCC TTTTCCCCTTCGTGC RSP_1996 593904 - 595958 + | putative competence protein lexA 596700 - 596014 - | LexA repressor RSP_1998 597941 - 596757 - | molybdopterin molybdochelatase TERM 295 597020 - 596987 - G 79 -15.9 -3.28712 | GCTCGGCGCGCAGAA GCGGCGCGGGGGCTG GCGG CAGCCCCAGCATCGC CCGCAGCATCGGCAG TERM 296 597719 - 597674 - G 71 -15.3 -3.01712 | gap 1 GTGCGCCGGTGAAGA TGCGCACGGCTTCGCCGGGGCG GAG CGCCCCCTCGTAGCCGTG-GCC CGCCGCGGCCTCGCC moaC 598417 - 597938 - | molybdenum cofactor biosynthesis protein C trpC 599229 - 598417 - | indole-3-glycerol-phosphate synthase trpD 600276 - 599260 - | anthranilate phosphoribosyltransferase trpG 600860 - 600273 - | anthranilate synthase component II TERM 297 601015 - 600981 - H 78 -13.5 -3.5774 | gap 1, overlap 601002 AGTCAATGCGCGAAA TGCCCCAGACGGGCCC GAAA GGGCCCGGC-GGCGCA GGGGCGAGGGCAGGA yibQ 601039 - 602472 + | YibQ protein trpE 604147 - 602636 - | anthranilate synthase component I ybaU 606023 - 604158 - | peptidyl-prolyl cis-trans isomerse TERM 298 604537 - 604553 + g 70 -9.3 -3.72893 | overlap 604551 TTGGCGATCTCGGTC GCGCGGG CGG CCAGCGC TTTGGTCAGGGCGTC TERM 299 606644 - 606676 + G 75 -12.6 -3.68261 | gap 1, overlap 606671 GCCGCCGAAGGCCGA GCCAGCCCGGCGCCG GCCT CGGC-CCAGGCGGGC TTTCCGCTCTTCTCG amsA 606221 - 608203 + | hypothetical protein RSP_2007 609009 - 608386 - | hypothetical protein TERM 300 610382 - 610369 - g 74 -9.5 -4.15044 | GTGCTGGCGAAGAAA GCCGC GGCC GCGGC CATGACCGCAGGCAC argD 609595 - 610776 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein argF 610890 - 611816 + | ornithine carbamoyltransferase TERM 301 611831 - 611851 + T 71 -11.8 -3.60792 | AGGCGCAGGCCAGGG GCGGGCCG GCTGA TGGCCCGC TTTCAGCCTTCGGAG RSP_2010 612246 - 612040 - | hypothetical protein TERM 302 612439 - 612415 - R 83 -4.9 -4.87665 | gap 1 GCGCATCGAGAAAAA CGC-CGGCCG TCACTC CGGACGCGCG ATTCCCGTCACCGTC RSP_2011 612918 - 612424 - | putative transcription elongation factor RSP_2012 613420 - 612944 - | NUDIX hydrolase, MutT RSP_2013 616325 - 613899 - | DEAD/DEAH box helicase RSP_2014 617084 - 616371 - | hypothetical protein TERM 303 617292 - 617335 + G 73 -13.6 -3.30771 | GCGCGCCATCACGCT GGTCGAGAGCCGCCGCGCCG ATCA CCGCGAGGCGGCGCTCGCGC TTCTGGCCGATCTGG argK 617221 - 618192 + | arginine/ornithine transport system ATPase rpmB 618406 - 618696 + | 50S ribosomal protein L28 TERM 304 618699 - 618675 - f 73 -12.1 -3.43654 | overlap 618669 618666 GAAAGAGATCGAGAA GGCTCAGGCCA CCG CGGCCTGATCC GGCGCCTTCGCCGCA TERM 305 618723 - 618743 + F 100 -19.7 -4.98531 | CGCCGCATGAGTGGG GGCCCCGCG TCG CGCGGGGCC TTTTTCGTTTCGGAC RSP_6029 618887 - 619231 + | hypothetical protein RSP_2017 619261 - 619743 + | hypothetical protein RSP_2018 620094 - 619783 - | hypothetical protein RSP_2019 620754 - 620302 - | hypothetical protein TERM 306 620499 - 620462 - G 72 -12 -3.61178 | gap 2 CCGAGGGAGCGGAAA CCCGCCTTCAGCCCCTCG AGAT CGAGGG-CCGC-GGCGGG GGTGAGGCCGGTGAA RSP_2020 621602 - 621117 - | DHC, diheme cytochrome c shp 622006 - 621617 - | Mono-heme class I cytochrome c RSP_2022 623101 - 622010 - | cytochrome b/diheme cytochrome c hybrid protein RSP_2023 623875 - 623291 - | hypothetical protein cspA 624198 - 624404 + | cold-shock DNA-binding protein family protein TERM 307 624449 - 624431 - T 85 -17.4 -3.22091 | opp_overlap 624431 ACTTCAAGGCAGGAA CGGGCGGC TCG GCCGCCCG TTTTTCATTTCTGAT TERM 308 624431 - 624449 + T 100 -17.4 -5.05505 | opp_overlap 624431 ACTTCAAGGCAGGAA CGGGCGGC TCG GCCGCCCG TTTTTCATTTCTGAT RSP_2025 624815 - 624498 - | hypothetical protein RSP_2026 624857 - 625834 + | AraC family transcriptional regulator TERM 309 625989 - 626035 + T 75 -16.4 -2.89564 | opp_overlap 625978 626010 AAGATCGGTGGACCC GGCGTCCGGCCGCGGGACAGAC CGG GTCCCTCCCGATCCCGGACGCC TGTCTCCGATAGGCC RSP_2027 626964 - 626074 - | LysR family transcriptional regulator TERM 310 626659 - 626626 - G 73 -14.6 -3.14564 | gap 1, opp_overlap 626615 GTAGCGGCGCAGGAA GGCCAGCACGAGCGG GGCCA CCGCCCGT-CCGGCC TGCACCGAGGCGTTG RSP_2028 627062 - 627385 + | hypothetical protein ucpA 627382 - 628161 + | short chain dehydrogenase RSP_2030 629184 - 628243 - | putative sensor histidine kinase RSP_2032 629873 - 630277 + | Gifsy-1 prophage protein RSP_2033 630298 - 630576 + | hypothetical protein RSP_2034 630649 - 631383 + | CAAX amino protease RSP_6030 631399 - 631695 + | hypothetical protein RSP_2035 632406 - 631702 - | hypothetical protein TERM 311 632361 - 632347 - G 76 -11.4 -3.7732 | opp_overlap 632346 CTCGTAGAGCAACAA CTCCGC CGA GCGGAG GAGATTCATGAAATC RSP_2036 632521 - 632718 + | putative ECF/RNA polymerase sigma factor protein RSP_2037 632780 - 633466 + | hypothetical protein RSP_2038 633935 - 634387 + | acetyltransferase TERM 312 634672 - 634695 + G 70 -2.2 -4.56597 | opp_overlap 634669 CTGGCGCAAGCAGCG GCATCGGGGC CGCA GCGGCGAGGC TTTTTGCGGCGGAGG TERM 313 635283 - 635295 + G 73 -6.2 -4.33274 | GATCCATCCGAGATC GCGC AGGCG GCGC TTTTCCTGCTCTCCG linC 634626 - 635378 + | short chain dehydrogenase RSP_2040 635422 - 635619 + | putative transposase RSP_2041 635737 - 636591 + | hypothetical protein RSP_2043 636721 - 636984 + | hypothetical protein RSP_2042 637414 - 636959 - | hypothetical protein RSP_2044 637688 - 639064 + | ATPase TERM 314 641016 - 641001 - g 74 -2.5 -4.62069 | overlap 640986 GTTCGACTTCAAAAA GGAAG TCGACG CCTCC TATCGTCCCTCCTTC RSP_2045 639541 - 641055 + | hypothetical protein RSP_2046 641174 - 642385 + | hypothetical protein RSP_2047 642382 - 644187 + | ThiF family protein RSP_2048 644180 - 644698 + | hypothetical protein RSP_2049 645350 - 644853 - | hypothetical protein RSP_2050 646172 - 645363 - | hypothetical protein TERM 315 646200 - 646181 - R 86 -12.1 -4.2349 | TCTCCATATGCAAAA GCCCCGC ACAAAG GCGGGGC GTGGTGGGTCGGACT RSP_2052 647033 - 646227 - | N6 adenine-specific DNA methyltransferase, D12 class RSP_2053 647337 - 648242 + | RarD family protein RSP_2054 648630 - 648313 - | hypothetical protein RSP_2055 649084 - 648767 - | hypothetical protein RSP_2056 649426 - 649109 - | hypothetical protein RSP_2057 650917 - 649433 - | hypothetical protein TERM 316 650514 - 650498 - G 70 -9.3 -3.78934 | GGTGGTGGAGAAGAA GCCGCGC GTG GCGCCGC CGGTGACGAAGTGCA RSP_2058 651823 - 650933 - | hypothetical protein RSP_2059 656844 - 651823 - | phage tail tape measure protein TERM 317 656868 - 656851 - R 74 -14.1 -3.35679 | opp_overlap 656848 656844 656840 CCTCCTCATGGAGAA GGCCGCC CGGA GGCGGCC TGGTCAGTTGCGTTT RSP_2061 657153 - 656968 - | hypothetical protein RSP_2062 657674 - 657288 - | hypothetical protein TERM 318 657324 - 657345 + g 73 -14.4 -3.32343 | overlap 657292 657291 CTTGGGCTTCGCCGG CGCCGGGG CGTTTC CCCCGGCG TTCTCGACCTCTGCC RSP_2063 658114 - 657671 - | hypothetical protein RSP_2064 658504 - 658124 - | hypothetical protein RSP_2065 659065 - 658508 - | hypothetical protein RSP_2066 659397 - 659065 - | hypothetical protein TERM 319 659103 - 659122 + g 72 -16.4 -2.78216 | overlap 659100 TGATCTCGATCCACT GCCGCCGG GTCT CCGGCGGC TCCTTGATACCGGTG RSP_6031 659735 - 659394 - | hypothetical protein RSP_6032 660166 - 659732 - | hypothetical protein TERM 320 659832 - 659854 + g 72 -11.9 -3.64609 | overlap 659846 659850 CGCTCACGAGCAGCT GCCGCGTCC TTCTC GGCCGCGGC TTTCGCCTCCTTCTC TERM 321 659964 - 660013 + g 77 -10.5 -4.1552 | gap 1 GCGGCCTCGGCCTCA CGCGCCGCTGCGGTCTCGGCATCG AGC CGG-GCCTTGATGCCGGCGGCGCG TTTCTTCGCGACATC TERM 322 660219 - 660196 - R 77 -17.4 -2.53876 | GGGGATCGGAACTGA GAGGCGGGCC CGAA GGCCCGCCCC GGTCACCTGCGCCGC RSP_2067 661538 - 660237 - | prophage LambdaSo, HK97 family major capsid protein RSP_2068 662390 - 661551 - | putative ClpP-like protease RSP_2069 663637 - 662387 - | HK97 family phage portal protein RSP_2070 665346 - 663637 - | putative Phage-related terminase TERM 323 665107 - 665089 - G 70 -10.2 -3.75738 | GATCATCACGAAGAA CTGCCGGA TCA TCCGGCGG CGGGTCTCCGGGTCG RSP_2071 665824 - 665348 - | hypothetical protein RSP_2072 666766 - 665867 - | putative Phage-related holin protein TERM 324 666800 - 666833 + r 78 -15.9 -3.06183 | opp_overlap 666802, overlap 666799 GGGTGCCGGAACGAG AAGCGCCCGGGGAGC ATCT GCTCTCCGGGCGCCA TTCGGTCCGCCTGCA TERM 325 666831 - 666802 - R 100 -20.7 -3.50853 | opp_overlap 666799 666800 GTGCCGGAACGAGAA GCGCCCGGGGAGC ATCT GCTCTCCGGGCGC CATTCGGTCCGCCTG RSP_6033 667535 - 666873 - | hypothetical protein RSP_2073 668104 - 667532 - | hypothetical protein TERM 326 668160 - 668178 + r 72 -4.5 -4.43859 | overlap 668163 ACCGCCCGATCTTCT CACCCCT GCAGA AGGGATG TTTTGTCAGGTTCTG RSP_2074 668991 - 668308 - | hypothetical protein RSP_6034 669633 - 668998 - | hypothetical protein TERM 327 669507 - 669482 - G 93 -13.9 -4.18018 | opp_overlap 669493, overlap 669483 TCGCTCGATCGAAAA GCGCCGGAGGC CGCA GCCCCCGGCGA AGTGGCCGCGTCCTG TERM 328 669506 - 669483 - G 79 -17.4 -3.10597 | opp_overlap 669493, overlap 669482 CGCTCGATCGAAAAG CGCCGGAGGC CGCA GCCCCCGGCG AAGTGGCCGCGTCCT TERM 329 669753 - 669735 - R 70 -13.1 -3.29829 | overlap 669747 CAGATGGTTGCAGAA GGCGCGG AAGGA CCGCGCC TCGTAGAACCGCTGC RSP_6035 670129 - 669791 - | hypothetical protein TERM 330 670059 - 670077 + g 74 -7.4 -4.18018 | overlap 670060 CGCATGTTCACTCCA TCTTCTCC CTT GGAGAGGG TTTTCGATGACGAAG TERM 331 670107 - 670146 + g 75 -16.4 -3.05596 | overlap 670111 GCGATTTCACGACCG GAGAGGGGGGCGGCGTAG AGCA TTACGCCGCCCCTCTAAC TTCGCTGGACCGGTC TERM 332 670111 - 670142 + g 85 -20.2 -2.54896 | overlap 670107 TTTCACGACCGGAGA GGGGGGCGGCGTAG AGCA TTACGCCGCCCCTC TAACTTCGCTGGACC RSP_2075 670405 - 670755 + | putative transcriptional regulator RSP_2076 671064 - 670762 - | hypothetical protein RSP_2077 671395 - 671727 + | hypothetical protein RSP_2078 671724 - 672122 + | hypothetical protein RSP_2079 672245 - 674056 + | ParB family protein RSP_6036 674132 - 674362 + | hypothetical protein RSP_2080 674362 - 675387 + | putative tyrosine recombinase RSP_2081 676011 - 675541 - | GNAT family acetyltransferase RSP_2082 676639 - 676328 - | putative NADH-ubiquinone oxidoreductase-related protein uvrB 676895 - 679078 + | excinuclease ABC subunit B TERM 333 679932 - 679915 - g 75 -12.7 -3.5882 | opp_overlap 679915 679914, overlap 679907 GAGACCAGCGCGAAA GCCGAGC TGAC GCTCGGC CTTTCGCCGCGCGAC RSP_2084 679417 - 680130 + | hypothetical protein RSP_2085 680408 - 680136 - | hypothetical protein RSP_2086 680826 - 680509 - | putative antibiotic biosynthesis monooxygenase RSP_2087 680949 - 681209 + | hypothetical protein RSP_6220 681463 - 681606 + | hypothetical protein lepA 683443 - 681644 - | GTP-binding protein LepA TERM 334 683818 - 683801 - R 100 -11.3 -4.99134 | opp_overlap 683800 683799 683804, overlap 683795 AGCTCAAACGAAAAA GAACCGC CGAA GCGGTTC CGTTTCCAACTCGCT TERM 335 683826 - 683846 + r 75 -5.3 -4.56597 | overlap 683827 683828 AGCGGTTCCGTTTCC AACTCGCTG ATC CAGCGAGAG TTTTTGGAGCGGGCG TERM 336 684358 - 684331 - R 85 -18.4 -3.02511 | CGGAGGCCGGGAAGA GGCCCCACGCCC TGCG GGGCGTGGGGGC GCTGGCAGTTCCCGG pycA 687843 - 684379 - | pyruvate carboxylase TERM 337 687939 - 687963 + H 76 -7.8 -4.386 | gap 1, overlap 687939 GGGAAGAAAATCTGA CC-GATCCGGC GCCT GCCGGAACAGG TTTTGTGAACGATTG RSP_2092 688026 - 690377 + | ATP-dependent DNA helicase Rep RSP_2091 691543 - 690398 - | putative benzoate transporter, BenE TERM 338 691643 - 691670 + r 85 -17 -3.12351 | opp_overlap 691643 CCAGGGAAATGAAAA CGGCGGCACCCT GGAG AAGGTGCCGCCG TTCGATCTGGGCCGG TERM 339 691670 - 691643 - R 100 -19.2 -4.56914 | opp_overlap 691643 CCAGGGAAATGAAAA CGGCGGCACCCT GGAG AAGGTGCCGCCG TTCGATCTGGGCCGG TERM 340 691712 - 691745 + r 72 -13.9 -3.21099 | opp_overlap 691694 CGGTCCGAAAGGGGG GCGGCGGCTCC AGGGAGGAGGAG GGAGCCGCCGC TTGGTCATCGGCACC TERM 341 691826 - 691859 + r 72 -13.9 -3.21099 | ATCCCGGAAGGGGAG GCGGCGGCTCC AGGGAGGAGGAG GGAGCCGCCGC TTGGTCATCGGCACC TERM 342 691940 - 691973 + r 72 -13.9 -3.21099 | ATCCCGGAAGGGGAG GCGGCGGCTCC AGGGAGGAGGAG GGAGCCGCCGC TTGGTCATCGGCACC TERM 343 692055 - 692088 + r 72 -13.9 -3.21099 | opp_overlap 692049 TCCCGGAAAGGGGAG GCGGCGGCTCC AGGGAGGAGGAG GGAGCCGCCGC TTGGTCATCGGCACC RSP_6037 692679 - 692464 - | hypothetical protein TERM 344 692646 - 692628 - G 72 -13.2 -3.56092 | CCACCAGGGCCGAAA CACGGTCT CCC AGACCGTG GTGCCCGATACGGGT RSP_2093 692949 - 694010 + | putative Mrp (multidrug resistance-associated proteins) family protein TERM 345 694807 - 694844 + F 95 -15.5 -4.06055 | overlap 694808 AGCGATGGGACAGGC ACGGCGGATCGGGCAGT GGCA GCCGCTCGATCCGCCGC TTTCGTTTCCGGGGT TERM 346 694808 - 694843 + F 85 -19 -3.03151 | overlap 694807 GCGATGGGACAGGCA CGGCGGATCGGGCAGT GGCA GCCGCTCGATCCGCCG CTTTCGTTTCCGGGG RSP_2095 694911 - 695417 + | cell division protein MraZ RSP_6038 695421 - 696416 + | methyltransferase MraW/YabC RSP_2097 696417 - 696776 + | putative FtsL ftsI 696773 - 698566 + | cell division protein FtsI/penicillin-binding protein 2 murE 698581 - 700068 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 700157 - 701590 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 701603 - 702685 + | phospho-N-acetylmuramoyl-pentapeptide-transferase RSP_2102 702782 - 703363 + | hypothetical protein murD 703796 - 705193 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase RSP_2104 705250 - 705720 + | hypothetical protein RSP_2105 706580 - 706074 - | hypothetical protein ftsW 706721 - 707887 + | cell division protein FtsW murG 707889 - 708983 + | N-acetylglucosaminyl transferase murC 708980 - 710392 + | UDP-N-acetylmuramate--L-alanine ligase RSP_2109 710406 - 710660 + | hypothetical protein murB 710657 - 711583 + | UDP-N-acetylmuramate dehydrogenase TERM 347 711603 - 711587 - f 93 -13.7 -4.19799 | overlap 711584 AACAAAGAATAATAA CGCGTCC ACA GGACGCG GCTGAGGCGGAAAAG ddlA 711623 - 712546 + | D-alanine--D-alanine ligase ftsQ 712534 - 713460 + | cell division septal protein FtsQ ftsA 713457 - 714791 + | cell division protein FtsA TERM 348 714836 - 714867 + F 100 -8.8 -5.52384 | gap 1, overlap 714844 CCGCTTACGCGGCCC GGCGA-TCACCCACA TTT TGTGGGTAATTTGCC TTTTTTTGATGACGA ftsZ1 714971 - 716629 + | cell division protein FtsZ TERM 349 716672 - 716654 - f 73 -13.1 -3.53091 | opp_overlap 716654 ATCTCTTTTTGGAAA GGCCCGG CGCGT CCGGGCC TTTTTCTTTTACGGA TERM 350 716654 - 716672 + F 100 -13.1 -5.45802 | opp_overlap 716654 ATCTCTTTTTGGAAA GGCCCGG CGCGT CCGGGCC TTTTTCTTTTACGGA lpxC 716857 - 717777 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 351 717785 - 717815 + F 100 -11.8 -5.00895 | opp_overlap 717798, overlap 717786 717787 TGCGCTGATCCTGGC GACGGGGCGCAAAG GCG TTTTGCGCCCCGGA TTTTTCTGTGCTAGG TERM 352 717786 - 717814 + F 83 -15.3 -3.59814 | opp_overlap 717798, overlap 717785 717787 GCGCTGATCCTGGCG ACGGGGCGCAAAG GCG TTTTGCGCCCCGG ATTTTTCTGTGCTAG TERM 353 717787 - 717813 + F 81 -18.8 -2.75165 | opp_overlap 717798, overlap 717786 717785 CGCTGATCCTGGCGA CGGGGCGCAAAG GCG TTTTGCGCCCCG GATTTTTCTGTGCTA comL 717892 - 718728 + | putative ComL lipoprotein recN 718756 - 720396 + | DNA repair protein RecN RSP_2119 720799 - 720407 - | hypothetical protein RSP_2120 722169 - 720796 - | putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase RSP_2121 722934 - 722305 - | hypothetical protein TERM 354 723058 - 723020 - R 74 -13.2 -3.34398 | gap 1, overlap 723018 723021 CCGCCCCGTGAAACA GCGCGACCGTCACCCCT GCAGCG AGGAG-GACGGTCGCGA TCATGGCGAACAGGA TERM 355 723057 - 723021 - R 73 -16.7 -2.60496 | gap 1, overlap 723020 723018 CGCCCCGTGAAACAG CGCGACCGTCACCCCT GCAGCG AGGAG-GACGGTCGCG ATCATGGCGAACAGG mtbC 723837 - 723139 - | putative dimethylamine corrinoid protein RSP_2123 723994 - 725082 + | radical SAM domain-containing protein RSP_2124 726187 - 725180 - | methionine synthase I TERM 356 726340 - 726288 - R 95 -14.5 -4.08692 | opp_overlap 726326 CAATTGTCCCGAAAA GCCCGTTCCCGCTGCTGCCGCGCCG AAC CGTCGCTGCCGCGCCCGGCACGGGC ATCGACCACGGGCCG RSP_2125 726719 - 726399 - | hypothetical protein TERM 357 726857 - 726878 + H 74 -13.7 -3.2827 | gap 1, opp_overlap 726851 726850, overlap 726858 CAGATCAACCTGAAC G-GGGCGCGC CCT GCGCGCCCTC TTCGTCGTTCGATCG TERM 358 726858 - 726876 + H 85 -17.4 -3.20494 | opp_overlap 726851 726850, overlap 726857 AGATCAACCTGAACG GGGCGCGC CCT GCGCGCCC TCTTCGTCGTTCGAT purC 726902 - 727654 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 727669 - 727908 + | component of phosphoribosylformylglycinamidine (FGAM) synthetase purQ 728140 - 728808 + | phosphoribosylformylglycinamidine synthase I (FGAM) synthase RSP_2129 728856 - 730619 + | sensor histidine kinase RSP_2130 730629 - 731957 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 359 732987 - 732976 - g 74 -7.2 -4.26076 | GGATGCGGACGAAAA GCCC TACC GGGC GATGGACCATGCCTC TERM 360 735164 - 735187 + G 91 -19.6 -3.33696 | opp_overlap 735166 CTCCAGAGATTGACA CAGGGGCGCC TCCG GGCGCCCCTG TTCGTTCCCGCAGGA TERM 361 735185 - 735166 - g 73 -16.4 -2.94354 | opp_overlap 735164 CCAGAGATTGACACA GGGGCGCC TCCG GGCGCCCC TGTTCGTTCCCGCAG rne 732464 - 735274 + | RNAse E RSP_2132 735510 - 735283 - | hypothetical protein TERM 362 735818 - 735843 + G 70 -9.7 -3.75024 | gap 1, opp_overlap 735810, overlap 735819 TCAATCAGGGCGCCC G-GCGCGGCC CGCTGAT GGCCGCGCTC TTCTTCGTGCTGGGC TERM 363 735819 - 735841 + G 72 -13.4 -3.45742 | opp_overlap 735810, overlap 735818 CAATCAGGGCGCCCG GCGCGGCC CGCTGAT GGCCGCGC TCTTCTTCGTGCTGG ccdA 735655 - 736401 + | putative cytochrome c-type biogenesis protein CcdA TERM 364 736600 - 736639 + G 73 -14.2 -3.28712 | gap 1 GCGCCCGGGGCGGGG GCCCGCATCCTGGCGCGTC GCG GGCGCGAT-GGAGGCGGGC TTCTGCGACACCGAG TERM 365 736907 - 736960 + G 70 -9.4 -3.74693 | gap 2 CTGATCTGGCCGCCG GCGGGCTGGCTGGCGG-GG-CTCCTG CTTG CGGGGGTCCTCCTCCTGCGGGTCCGC TTTCCTCCGCTGCCG RSP_2136 736430 - 737644 + | hypothetical protein RSP_2135 737847 - 737626 - | hypothetical protein RSP_2137 738047 - 737844 - | hypothetical protein fumC 739441 - 738047 - | fumarate hydratase TERM 366 738100 - 738149 + g 76 -11.4 -3.7941 | overlap 738130 CGCGGTCGAAGGTCT CGGCATCGACGAGGC-CGAGGGCG ATGG CCTCCTCGCGCAGCGTCG-TGCCG TTCTTGTGCGCGGTC RSP_2139 740066 - 739608 - | hypothetical protein RSP_2140 740825 - 740169 - | hypothetical protein TERM 367 741718 - 741759 + r 73 -12.1 -3.42013 | gap 1 GTCCGCGCGTGCGGA GGCGGGCGCCGGA-GCGCCC GCC GGGCGGATCAGAAGCCCGCC TTGATCTTCTCGAAT RSP_2141 742793 - 741747 - | ABC polyamine transporter, periplasmic substrate-binding protein RSP_2142 743132 - 744370 + | NifS-related protein RSP_2143 744522 - 745937 + | deoxyribodipyrimidine photo-lyase type I cfaS 745971 - 747182 + | cyclopropane-fatty-acyl-phospholipid synthase trgA 747208 - 747648 + | tellurite resistance protein TERM 368 747873 - 747917 + G 79 -14.2 -3.61398 | gap 1, opp_overlap 747862, overlap 747875 CAGACCGCGACCGGC CACGAG-GCCCGCACGCTCGC GGTG GCGGGCGCGCCGGCGCTCGTC TTCTTCGCCCCGCCC TERM 369 747875 - 747915 + G 83 -16.8 -3.38812 | gap 1, opp_overlap 747862, overlap 747873 GACCGCGACCGGCCA CGAG-GCCCGCACGCTCGC GGTG GCGGGCGCGCCGGCGCTCG TCTTCTTCGCCCCGC TERM 370 748475 - 748417 - g 70 -14.5 -2.87931 | gap 1 TCGATCCCGGAGAGA CGC-CCGAGGCCGCGGCCCGCCGC GAGGCGGTGGAG GAGGCGGGGCTCGACCTCGGCGCG CTCCTGCCGGTGGCC trgB 747648 - 748733 + | tellurite resistance protein cysK 749066 - 750100 + | cysteine synthase A TERM 371 750298 - 750265 - g 70 -13.1 -3.32268 | gap 1, overlap 750267 CAAGCAGTGGGAGAA GACGGCGA-CCCGCGC CGA ACGCGAGATCGCCGAC CGCGAGACCGACAGC TERM 372 750296 - 750267 - g 70 -14.3 -3.22653 | gap 1, overlap 750265 AGCAGTGGGAGAAGA CGGCGA-CCCGCGC CGA ACGCGAGATCGCCG ACCGCGAGACCGACA RSP_2148 750104 - 752647 + | small conductance mechanosensitive Ion channel RSP_2149 752647 - 753366 + | Ala-tRNA(Pro) hydrolase RSP_2150 754205 - 753492 - | glycosyl transferase yohD 754753 - 754202 - | DedA family, membrane protein RSP_2152 755838 - 754750 - | ceramide glucosyltransferase RSP_2153 756644 - 755838 - | metallo-phosphoesterase RSP_2154 758079 - 756778 - | hypothetical protein TERM 373 757290 - 757270 - G 75 -12.5 -3.67597 | overlap 757272 GGCCGGATCGAAGAA GACGAGGCG GTC CGCCTCGGC CCCGCGCTCATACCA TERM 374 757288 - 757272 - G 73 -13.7 -3.41988 | overlap 757270 CCGGATCGAAGAAGA CGAGGCG GTC CGCCTCG GCCCCGCGCTCATAC hisD 759406 - 758081 - | histidinol dehydrogenase RSP_2156 760213 - 759416 - | ABC transporter, inner membrane subunit RSP_2157 761145 - 760210 - | ABC transporter, inner membrane subunit RSP_2158 762802 - 761705 - | ABC transporter, periplasmic solute-binding protein RSP_2159 763955 - 762822 - | ABC transporter, ATPase subunit TERM 375 763304 - 763344 + g 76 -16.1 -3.23216 | opp_overlap 763316, overlap 763328 CCATCACGATGATCT CGTCGGACACGACCAGCGC CTC GCGCTGGTCGTGGGTCACG TTGATCGTGGTGACG TERM 376 763509 - 763452 - G 78 -17.7 -2.66216 | gap 1, overlap 763451 763466 763469 GTCGAGCAGCAGAAG TTCGGGC-TCGAACACCAGCGCGCGGGC GAT GGCCACGCGCTGCTGCTGGCCGCCCGAA AGCTCGTGGATGCGC TERM 377 763865 - 763821 - G 82 -18.6 -3.15861 | gap 2 GAGGATGGTGAGGAA GCGCCCG-CG-GGCGAGCGCGA AGC TCGCGCCCGCCACGGCGAGCGG GCCGCTGCCGAAATC gno 764796 - 764032 - | Short-chain dehydrogenase/reductase bcrC 765699 - 764992 - | efflux channel RSP_2163 765995 - 766798 + | lytic murein transglycosylase, putative putR 767624 - 767169 - | AsnC family transcriptional regulator TERM 378 769198 - 769246 + G 75 -13.6 -3.53012 | overlap 769200 GCTCACCGCGATGGA GCGGACGGAGCCCGTGCGCAAC CCGGT GCTGCGCGCCGGCACCGACCTC TTTCCCGGGCGCAGG TERM 379 769200 - 769244 + G 75 -14.8 -3.34398 | overlap 769198 TCACCGCGATGGAGC GGACGGAGCCCGTGCGCAAC CCGGT GCTGCGCGCCGGCACCGACC TCTTTCCCGGGCGCA TERM 380 769899 - 769931 + G 76 -16.9 -2.73994 | overlap 769896 GCGGGACGGTGGGTG CGGCCCTCACGCGCG ATC CGCGGGTGGGGGGCG TGGTCTTCACCGGCT putA 767735 - 771376 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase RSP_2167 771407 - 772147 + | hypothetical protein RSP_2168 772144 - 772500 + | hypothetical protein TERM 381 772732 - 772677 - T 70 -12.2 -3.32914 | overlap 772673 772671 AGCCAACCAGAGCAA GCCACGTCCGGCACGGCCGCCGGCCG CGCT CCACCGCCCGCCCTTCCGGGCGGGGC GGCTCACTCGCCGCG suhB 773521 - 772736 - | inositol monophosphatase family protein RSP_2170 775170 - 773653 - | inorganic phosphate transporter TERM 382 774740 - 774714 - G 100 -19.4 -4.34402 | overlap 774715 TGGCCCAGACGAAAA TCCCGGCCTCGG CGA CCGAGGCCGGGT CCACGATCCCGCCCG TERM 383 774739 - 774715 - G 100 -22.9 -3.2032 | overlap 774714 GGCCCAGACGAAAAT CCCGGCCTCGG CGA CCGAGGCCGGG TCCACGATCCCGCCC metR 776203 - 775298 - | LysR family transcriptional regulator metF 776298 - 777164 + | 5,10-methylenetetrahydrofolate reductase TERM 384 777310 - 777284 - T 95 -19.4 -3.67558 | opp_overlap 777285, overlap 777285 GAGACACCGCAAGAA CCGCCCGGAGGC CCC GCCTCCGGGCGT TGTCGTCAGGAGCGC TERM 385 777285 - 777309 + T 100 -22.9 -3.40403 | opp_overlap 777284 777285 AGACACCGCAAGAAC CGCCCGGAGGC CCC GCCTCCGGGCG TTGTCGTCAGGAGCG TERM 386 777309 - 777285 - T 87 -22.9 -2.80053 | opp_overlap 777285, overlap 777284 AGACACCGCAAGAAC CGCCCGGAGGC CCC GCCTCCGGGCG TTGTCGTCAGGAGCG RSP_2173 777861 - 777316 - | hypothetical protein RSP_2174 778465 - 777875 - | ABC transporter inner membrane protein RSP_2175 779180 - 778440 - | ABC transporter, ATPase subunit gabT 780058 - 779483 - | aminotransferase gabT 780759 - 780055 - | aminotransferase RSP_2177 781012 - 782130 + | hypothetical protein TERM 387 785029 - 785005 - g 100 -20.7 -3.95324 | CACGGCCAAGAAGAA GGCGGCGCCGG ATA CCGACGCCGCC TGACGGAAGAAGCCT topA 782378 - 785032 + | DNA topoisomerase I TERM 388 785070 - 785041 - T 85 -16.3 -3.67597 | CGCCTGACGGAAGAA GCCTGCCGGTCGG GGAA CCGTCCGGCGGGC GGTTCGGGCCTCAGA proV 786109 - 785081 - | ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV proW 786960 - 786106 - | ABC glycine betaine/L-proline transporter, inner membrane subunit TERM 389 787058 - 787029 - R 95 -24.3 -2.78384 | opp_overlap 787050 TCTGCCGGGATCAGA CGGCGCGCGCCCC GGGC GGGACGCGCGCCG GACGGATCAGAGGCC proX 787991 - 787065 - | ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit betI 788078 - 788662 + | transcriptional regulator BetI betB 788659 - 790110 + | betaine aldehyde dehydrogenase TERM 390 790996 - 790977 - g 74 -9.3 -4.07568 | GGGCGTGGGCCAAAA CCTCCAG GATCAT CTGGAGG TCTACATGCAGTTCG TERM 391 791792 - 791739 - g 73 -14.5 -3.14564 | gap 1 CGAGCCGGTGACGAA CCCGAACTGGCGCACGG-CCCAACGC TGA GGGTTGGGGCCTTCCGGCAGGTCGGG GCCGCTCCGGGGTGG betA 790120 - 791766 + | choline dehydrogenase RSP_2185 791845 - 792525 + | nuclease (SNase-like) RSP_2186 794218 - 792833 - | MerR family transcriptional regulator TERM 392 792863 - 792890 + g 71 -9.1 -4.07568 | gap 1, opp_overlap 792860 GTATGGCAGCAACCC GCGCCGGTCGGG GTCCA CCCGAA-GGCGC TTTTCCAGCGGCGGC RSP_2187 795500 - 794280 - | major facilitator superfamily multidrug-efflux transporter RSP_2188 795890 - 795537 - | hypothetical protein TERM 393 796074 - 796048 - g 73 -13.7 -3.37464 | gap 1, overlap 796049 CCAGGAACTCGAGAA CCGCCG-CGCGA TCGC CCGCGCCGGCGG CGGCCAGCGCCGGGT pccB 796019 - 797551 + | propionyl-CoA carboxylase beta chain TERM 394 797636 - 797591 - f 95 -19 -3.72576 | opp_overlap 797602 TCGCCGCTGAGGAAA GCGTCGGCACCGCGC-GGAGCC CTGT GGCTCCCGCGCGGAGGCG-CGC GGATCGTCGGGGTCG RSP_6040 797703 - 798050 + | hypothetical protein RSP_2190 798472 - 798870 + | hypothetical protein TERM 395 799012 - 798979 - f 71 -11.8 -3.63515 | gap 2, opp_overlap 798995 CCCCATGTTGAAGAA GCGGAA-GC-CCCCGC CTCG GCGGGGCACCTTCCGC AGTCTTGCGACCCTT TERM 396 799036 - 799068 + F 86 -12.5 -4.13014 | overlap 799037 GACCCTTCCCTTTCC TTCCGGTCCGGCGCG TCT CGCACCGGGCCGGCC TTTTGCCGGTGTGAG TERM 397 799037 - 799067 + F 78 -16 -3.07487 | overlap 799036 ACCCTTCCCTTTCCT TCCGGTCCGGCGCG TCT CGCACCGGGCCGGC CTTTTGCCGGTGTGA TERM 398 799090 - 799114 + F 72 -5.7 -4.28049 | overlap 799110 CGGTGTGAGCGGCAA TCGGCCG AACCTGCCCCC CGGCCGA TTTTCGGCTTTTCCG TERM 399 799110 - 799122 + F 75 -9.1 -4.11216 | overlap 799090 CGAACCTGCCCCCCG GCCGA TTT TCGGC TTTTCCGCGTCGCCG RSP_6221 799185 - 799412 + | hypothetical protein TERM 400 799519 - 799548 + G 100 -22.9 -4.67038 | ACCAGTGCATCTCAG GGACCGTCCGGGC TTTG GCCCGGGCGGTCC TTTTCGTTTTCGCGC TERM 401 801557 - 801537 - g 70 -12.5 -3.39784 | opp_overlap 801537, overlap 801535 GCACGGTCAAGAAGA TCGCCGCCG CGC CGGGGGCGA GCCTGCGGGTCGACG pccA 799508 - 801595 + | propionyl-CoA carboxylase alpha subunit RSP_6041 802040 - 801597 - | hypothetical protein mcmA 802132 - 804261 + | methylmalonyl-CoA mutase TERM 402 804264 - 804300 + F 95 -28.8 -2.52543 | overlap 804267 GGCCCGCAGCTGACC CGACCGGCGCCGCCCG ACCCC CGGGCGGCGCCGGTTG TCCCTTGCGGCCCCT TERM 403 804267 - 804297 + F 100 -26.9 -3.41878 | overlap 804264 CCGCAGCTGACCCGA CCGGCGCCGCCCG ACCCC CGGGCGGCGCCGG TTGTCCCTTGCGGCC TERM 404 804522 - 804551 + F 73 -7.9 -4.19746 | gap 1 CATCCGCCGCACCCC CATGTCGCCTTTCG CGG CGAAAG-CGTCGTG TTCTTTTCCGCTGGA TERM 405 805625 - 805652 + G 77 -14.8 -3.53012 | gap 1, opp_overlap 805619 GATCCAGAAGGCCCG GCGGCCCG-GCGG CGC CCGCGCGGGCGGC TTTGCCGGCGACCAG TERM 406 805708 - 805758 + G 71 -8.9 -4.07568 | gap 2 GACCCGAGCGTCTGC GCGTGGGGCTCTC-CCCGTCGG-GC CGC GCGCCGATGCGCGAGGGCACCGAGC TTTTCACGCCCGACG gcvT 804825 - 805958 + | glycine cleavage system aminomethyltransferase T gcvH 805967 - 806323 + | glycine cleavage system protein H gcvP 806327 - 809197 + | glycine dehydrogenase TERM 407 809249 - 809216 - T 89 -18.9 -3.34398 | opp_overlap 809223, overlap 809223 GGGCCTCCTGAAAGA CGGAAAAGGGCGGGG AGTT CCCCGCCCTTTCTCG TGTCGGCAACCTTCG TERM 408 809223 - 809242 + T 100 -16.4 -4.0162 | opp_overlap 809216 809223 CTGAAAGACGGAAAA GGGCGGGG AGTT CCCCGCCC TTTCTCGTGTCGGCA TERM 409 809242 - 809223 - T 100 -16.4 -4.323 | opp_overlap 809223, overlap 809216 CTGAAAGACGGAAAA GGGCGGGG AGTT CCCCGCCC TTTCTCGTGTCGGCA RSP_2196 811588 - 809387 - | 3-hydroxyacyl-CoA dehydrogenase RSP_2197 812814 - 811603 - | acetyl-CoA acetyltransferase RSP_2198 813328 - 812885 - | hypothetical protein RSP_2199 815130 - 813355 - | putative acyl-CoA dehydrogenase TERM 410 813912 - 813926 + g 72 -12.8 -3.54638 | opp_overlap 813889, overlap 813923 CGCCCCAGACCTGCT GCGCGG CCA CCGCGC TTTCCAGACCCTTGT RSP_2200 815547 - 815149 - | MerR family transcriptional regulator RSP_2201 816049 - 815669 - | MerR family transcriptional regulator RSP_2202 816157 - 816648 + | hypothetical protein RSP_2203 816645 - 817151 + | hypothetical protein RSP_2204 817144 - 818478 + | multidrug efflux pump, MATE family RSP_2205 819248 - 818490 - | hypothetical protein RSP_2206 820165 - 819245 - | hypothetical protein deoD 821051 - 820251 - | purine nucleoside phosphorylase TERM 411 820584 - 820526 - G 70 -15.1 -2.93703 | gap 2, overlap 820516 820518 AGAACCAGGCATAGA CGCCCTCGCCGAGC-G-GCACGCCCGCCG CTT CGGCGGCCGCGCGCAGCCGGGCGCGGAGG TCGGGGTCGTGCGCA RSP_2208 822021 - 821053 - | ABC sugar transporter, inner membrane subunit TERM 412 821425 - 821452 + g 70 -12.6 -3.28712 | GATGGCCACGACGGA CACGCCCGCCGT GTCG ACGGCGGCCGGG TTCTCGCCCACCGCG RSP_2209 823112 - 822018 - | ABC sugar transporter, inner membrane subunit RSP_2210 824689 - 823112 - | ABC sugar transporter, fused ATPase subunits RSP_2211 825685 - 824690 - | ABC transporter, periplasmic substrate-binding protein rimI 826321 - 825839 - | putative acetyltransferase RSP_2213 826926 - 826318 - | hypothetical protein TERM 413 826896 - 826863 - G 77 -14.5 -3.53012 | gap 1, overlap 826867 GCCGGTCCCCCGAAA GCAACG-CGGCCGCGC AAT GCGCGGCCGACGTGTC GAAGGCCAGGATCGC TERM 414 826892 - 826867 - G 87 -18.3 -3.51232 | gap 1, overlap 826863 GTCCCCCGAAAGCAA CG-CGGCCGCGC AAT GCGCGGCCGACG TGTCGAAGGCCAGGA RSP_2214 827476 - 826916 - | nitrogen-fixing NifU TERM 415 827545 - 827561 + r 88 -15.1 -3.70902 | GAATTGGCCCCCTCC GCGCGCG CCC CGCGCGC TTTCACTCTGCCCAA TERM 416 827588 - 827610 + r 74 -12.6 -3.55071 | opp_overlap 827581 827580 827578 CCAAATATCCCGGGG GTCCGGGGGT AGC GCCCCCGGCC TTTCGCCGGATCTCA RSP_2215 828027 - 827623 - | hypothetical protein ilvE 829000 - 828137 - | aminotransferase RSP_2217 829550 - 829071 - | hypothetical protein RSP_2218 829813 - 830355 + | hypothetical protein RSP_2219 831271 - 830390 - | putative lipid A biosynthesis lauroyl acyltransferase RSP_2220 832643 - 831570 - | flagellar motor switch protein (fliG) TERM 417 832620 - 832601 - G 73 -16.4 -2.92192 | overlap 832596 CCCCATCTAAGGACA CCGCCCCG CGAG CGGGGCGG AACCGTGCCAGAGCC RSP_6042 832858 - 832703 - | hypothetical protein purB 834289 - 832985 - | adenylosuccinate lyase RSP_2222 834711 - 834397 - | hypothetical protein RSP_2223 837955 - 834809 - | AcrB/AcrD/AcrF multidrug efflux pump RSP_2224 839125 - 837959 - | multidrug efflux pump, membrane fusion protein RSP_2225 839367 - 840038 + | hypothetical protein glgX 842400 - 840316 - | glycosidase glgC 843626 - 842397 - | ADP-glucose pyrophosphorylase TERM 418 843724 - 843706 - R 86 -4.4 -5.14563 | GGCGGCATGAAAAAA GGCTTGCG ATC CGGGAGCC TGTGCCACCGGCTGC RSP_2228 844626 - 844096 - | PAS domain-containing protein RSP_2229 844698 - 848210 + | methylesterase CheB/methylase CheR RSP_2230 848230 - 848544 + | response regulator receiver domain-containing protein RSP_2231 848771 - 849025 + | hypothetical protein TERM 419 849041 - 849028 - T 73 -8.1 -4.19238 | opp_overlap 849028 GCCGGAAGTTTAAAA GCGTC TCAG GACGC TCCTGTTCCGAAGCC TERM 420 849083 - 849108 + T 72 -8.9 -4.09685 | opp_overlap 849084, overlap 849087 CCCCTGGCCGAGATC ATGAGGGGCGC AGCA GCGCCCCTTGG TTTTGGCGCCTCGAA TERM 421 849087 - 849104 + T 78 -14.1 -3.67175 | opp_overlap 849084, overlap 849083 TGGCCGAGATCATGA GGGGCGC AGCA GCGCCCC TTGGTTTTGGCGCCT RSP_2232 850844 - 849420 - | putative uracil-DNA glycosylase TERM 422 850764 - 850751 - G 72 -3.7 -4.57569 | GCAGGTCGGCAAAAA GGTCG GCTT CGCCC GCGCCCACGCGCCAG RSP_2234 852097 - 850877 - | DNA-binding protein TERM 423 851867 - 851837 - G 70 -12.5 -3.35679 | overlap 851863 CTCTTCGACCGAGAA CCGCGCCCGCTCG ACCCG CGAGGAGACGCGG TTCACGCAATAGGCG RSP_2235 853220 - 852180 - | hypothetical protein RSP_2236 853322 - 853789 + | MarR family transcriptional regulator RSP_2237 853786 - 854892 + | membrane fusion protein (MFP) family protein TERM 424 854947 - 854924 - g 82 -13.8 -3.85817 | ACCGCTGCTCAGAAA CAGCCCGTGG AGCA CCGCGGGCTG ATCACCCTCGTGATC RSP_2238 854906 - 856429 + | major facilitator superfamily multidrug-efflux transporter TERM 425 856477 - 856440 - f 74 -12.7 -3.5944 | overlap 856441 ACTGAGAGGGGGAAA GTGGCCGCGGGCG CAATGGGGAGGT CGCCCGCGGCCAG AGCCCTCGGTGCGGA TERM 426 856476 - 856441 - f 74 -16.2 -2.75343 | overlap 856440 CTGAGAGGGGGAAAG TGGCCGCGGGCG CAATGGGGAGGT CGCCCGCGGCCA GAGCCCTCGGTGCGG RSP_2239 857218 - 858003 + | tRNA/rRNA metyltransferase TERM 427 858016 - 858028 + F 83 -4.7 -4.90525 | opp_overlap 858006, overlap 858011 TAAATGTTCACGGAC GCGCG ATC CGCTC TTTTCTTTGCCGTTG TERM 428 858115 - 858139 + F 100 -12.7 -5.75342 | CCTCGTTCCGCACTA GCGCCCGGCCC TTC GGTCAGGGCGC TTTTTTTTGACCCGC RSP_2240 858192 - 858638 + | hypothetical protein hisE 859151 - 858840 - | phosphoribosyl-ATP pyrophosphatase hisF 859909 - 859148 - | imidazole glycerol phosphate synthase subunit HisF hisA 860763 - 860044 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase RSP_2244 860903 - 861283 + | hypothetical protein TERM 429 861350 - 861330 - T 73 -9.6 -3.89215 | CCGGACAAAGGGAAA CCGCGGGG TCTGG CGCCGCGG TGCGGAGTGCGGGAG hisH 862146 - 861508 - | imidazole glycerol phosphate synthase subunit HisH hisB 862733 - 862146 - | imidazoleglycerol-phosphate dehydratase fusA 862970 - 864979 + | elongation factor G TERM 430 864987 - 865014 + T 85 -17 -3.18264 | gap 1, opp_overlap 864973 AGGCCTGAAGCGGGA GGGGCGGCGTCGG CAT CCGG-GCCGCCCC TTCCTCGGTGCCGGA RSP_2249 866332 - 865112 - | major facilitator superfamily multidrug-efflux transporter TERM 431 866118 - 866098 - G 70 -12.5 -3.33492 | overlap 866080 CGAGCGAGCCGAGAA GGATCGGCC GCC GGCCGAACC GGTCGGAGAGGCTGC RSP_2250 867091 - 866363 - | hypothetical protein TERM 432 866497 - 866447 - G 91 -20.5 -3.29471 | gap 1, overlap 866448 GGGGCAGGAGAGGAA GGGCGAGTGGCCTGCGGGCAGGGT CGAG ACGCTGCCCGCAGGCCAGTC-CGC GGTCATGGCCTCCTG TERM 433 866497 - 866448 - G 85 -20.7 -2.57468 | overlap 866447 GGGCAGGAGAGGAAG GGCGAGTGGCCTGCGGGCAGGGT CGAG ACGCTGCCCGCAGGCCAGTCCGC GGTCATGGCCTCCTG RSP_2251 867872 - 867084 - | 3-oxoadipate enol-lactonase TERM 434 867153 - 867111 - G 76 -15.7 -3.16881 | opp_overlap 867122 GATGGAGCGGAGGAA CTCGGT-GACGAGCGCGGCCA CCT CGGCCG-GCTTGTCGACCGAG GGGACATGGCCCGCG RSP_2252 869077 - 868100 - | L-threonine ammonia-lyase RSP_2253 869898 - 869074 - | hydrolase or acyltransferase RSP_2254 870307 - 872043 + | ABC efflux transporter, fused ATPase and inner membrane subunits RSP_2255 872149 - 874038 + | acyl-CoA synthetase dtd 874848 - 874411 - | D-tyrosyl-tRNA deacylase RSP_2257 875768 - 874848 - | putative fructokinase TERM 435 874896 - 874939 + g 87 -18 -3.53012 | gap 1, opp_overlap 874893 874892, overlap 874897 CGGCCGCGAAACGGT GAC-CGCCGCGGCCCGCGTGC CGA GCGCGAGGGCCGCGGCGAGGG TTTCAGGGGAGAGGG TERM 436 874897 - 874938 + g 90 -21.5 -2.71712 | gap 1, opp_overlap 874893 874892, overlap 874896 GGCCGCGAAACGGTG AC-CGCCGCGGCCCGCGTGC CGA GCGCGAGGGCCGCGGCGAGG GTTTCAGGGGAGAGG TERM 437 875657 - 875628 - G 73 -11.3 -3.7941 | gap 1, opp_overlap 875630 GAGGCCCGAGAAGAA GCCCGCGGGCGCGC CGA GC-CGCCCGAGCGC GATGGCCGTGTTGAA hemH 876741 - 875782 - | phosphoribosylaminoimidazole-succinocarboxamide synthase RSP_2259 877245 - 876808 - | transmembrane protein ydjG 878347 - 877250 - | hypothetical protein ydjI 879458 - 878349 - | antifreeze protein, type I RSP_2262 880277 - 879639 - | hypothetical protein RSP_2263 881258 - 880293 - | hypothetical protein TERM 438 881169 - 881122 - G 75 -16.3 -3.04263 | gap 3 ACCGGACCCTGAAGA TCCGC-CG-GCCGCGCGCGCGGAC CGA GTCCGTGCGCG-GGCTCGCGCGGG GCGGGCGGCGTGCAG telA 882461 - 881271 - | tellurite resistance protein RSP_2265 883488 - 882610 - | hypothetical protein TERM 439 883681 - 883640 - R 78 -9.4 -4.36914 | gap 3, opp_overlap 883652 883653, overlap 883641 CGGCTCGCCAGAAAA GGCGCGGAGACCCGCGGC-CC GGG GGTGCCG-GGGTCAGCGC-CC GCCGGGCCGGCCTTT TERM 440 883652 - 883693 + r 74 -12.2 -3.64703 | gap 2, opp_overlap 883640 883641, overlap 883653 AAAGGCGCGGAGACC CGC-GGCCCGG-GGGTGCCG GGGT CAGCGCCCGCCGGGCCGGCC TTTCGGTCCGCGCGA TERM 441 883653 - 883692 + r 70 -15.7 -2.78679 | gap 2, opp_overlap 883640 883641, overlap 883652 AAGGCGCGGAGACCC GC-GGCCCGG-GGGTGCCG GGGT CAGCGCCCGCCGGGCCGGC CTTTCGGTCCGCGCG rluB 885199 - 883673 - | pseudouridine synthase, TERM 442 884108 - 884164 + g 93 -19.5 -3.53012 | gap 4, overlap 884142 884144 GCTGCCCGGGCGGGA GGTGCGCGCCG-GGC-CCGC-TCCGGCGC CCC GCGCCGGGCGCGCAGCCTCGGC-CGCGCC TTTGCCCGCCGAGCG TERM 443 884304 - 884322 + g 81 -13.1 -3.9122 | CCCTCCGCCGCGGCG CCGCGCG GCGGA CGCGCGG TTCTTTCGGAGCGTG RSP_2267 885533 - 885985 + | hypothetical protein RSP_2268 886688 - 885996 - | metallo beta lactamase superfamily protein RSP_6222 886751 - 887407 + | hypothetical protein gatC 887451 - 887738 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C gatA 887735 - 889210 + | aspartyl/glutamyl-tRNA amidotransferase subunit A RSP_2271 889158 - 890048 + | hypothetical protein ampD 890052 - 890723 + | N-acetylmuramoyl-L-alanine amidase TERM 444 890911 - 890891 - T 71 -11.1 -3.60792 | GGGGCAAGGGTGAAA CGGTGGGGT AAG AGCCCACCG CGGGACTGGCAACAG TERM 445 891135 - 891183 + T 73 -13.1 -3.53444 | opp_overlap 891133 891137, overlap 891137 GCTGCCCGCACAACT GATCCCGGCCGAGG-CCGGGGGC TTCGC GCCCCCGGACCCCCGC-GGGATA TTTGGGCCAGCGTGA TERM 446 891181 - 891137 - T 77 -17.9 -2.59431 | opp_overlap 891135 891137, overlap 891133 TGCCCGCACAACTGA TCCCGGCCGAGG-CCGGGGGC TTCGC GCCCCCGGACCCCCG-CGGGA TATTTGGGCCAGCGT TERM 447 891137 - 891181 + T 79 -15.7 -3.34517 | opp_overlap 891137 891133, overlap 891135 TGCCCGCACAACTGA TCCCGGCCGAGG-CCGGGGGC TTCGC GCCCCCGGACCCCCGC-GGGA TATTTGGGCCAGCGT RSP_2273 892443 - 891211 - | putative anaerobic phenylacetate CoA ligase RSP_2274 893270 - 892440 - | branched chain amino acid ABC transporter ATPase RSP_2275 894646 - 893357 - | branched chain amino acid ABC transporter periplasmic substrate-binding protein TERM 448 894269 - 894250 - G 77 -10.6 -4.15006 | ACACCCATTCGAAAA CGCGGCCG TTGG CGGCCGAG GTCCGCCCGTAGCCC TERM 449 894583 - 894638 + g 73 -9.5 -3.96327 | gap 2, opp_overlap 894576, overlap 894585 CGACGAGATCCGCCT GCGCCGCGCCC-GC-CGTCGCGGCGGC GAGC GCCGTCGCGGCGAGCAGGGTGAAACTC TTTCTCATGGACACT RSP_2276 895783 - 894707 - | branched chain amino acid ABC transporter inner membrane protein RSP_2277 896776 - 895787 - | branched chain amino acid ABC transporter inner membrane protein TERM 450 896155 - 896180 + g 72 -12.5 -3.55205 | gap 1, overlap 896159 CCGCCTGATGGTCGT CGGCCACGGCGC GCA GCG-CGCGGCCG TATTTGGTATATTGC RSP_2278 897750 - 896911 - | branched chain amino acid ABC transporter ATPase RSP_2279 900000 - 898039 - | long chain acyl-CoA synthetase TERM 451 899747 - 899727 - G 73 -16.1 -2.87132 | CCGCGTCCTGATAGA GCGGCACGG GCA CCGCGCCGC ACATCTGCGCCGCCA RSP_2280 900561 - 902483 + | PAS sensor hybrid histidine kinase RSP_2281 902480 - 903187 + | two-component transcriptional regulator chrA 904376 - 903198 - | chromate efflux pump, ChrA TERM 452 904687 - 904707 + H 100 -15.4 -4.49337 | TGTATAAGCGCGCAT CCCCGGGC AATCG GCCCGGGG TTTTCATTGGTGTTG rpsD 904801 - 905421 + | 30S ribosomal protein S4 TERM 453 905496 - 905518 + F 100 -18.4 -5.60993 | ACCGCCCAACCTTCC GCCGCCCCGC CTT GTGGGGCGGC TTTTTTTGTCCGCCA RSP_2284 905665 - 906750 + | histidinol-phosphate aminotransferase RSP_6215 906750 - 907685 + | cyclohexadienyl dehydrogenase TERM 454 907891 - 907868 - g 77 -14.6 -3.53012 | gap 1 CGGCCGGCGGTGAAA CT-GGCCGCGG TCG CCGCGGCCGAG CCCGCCATGAGCTTC TERM 455 908321 - 908305 - g 72 -11.5 -3.63515 | CCGCAGCCGCAACAA CCAGCGC GGC GCGCCGG TGAGCGAGCACGGCC RSP_2285 907691 - 908548 + | hypothetical protein RSP_2286 909546 - 908551 - | hypothetical protein RSP_2287 909607 - 910155 + | ChaC-like protein RSP_2288 910229 - 911404 + | hypothetical protein RSP_2289 911408 - 912985 + | hypothetical protein RSP_2291 913317 - 913817 + | hypothetical protein TERM 456 913837 - 913859 + T 84 -7.7 -4.76041 | gap 1 CGACCCGTTCTGCGG GGCGGCTTGC GAGT GCGA-CCGCC TTTTTCATCGATGTC TERM 457 914704 - 914671 - T 71 -11.7 -3.63627 | opp_overlap 914678 914679, overlap 914679 CTCTGATATGTGAAA GGAAAAAAGGCGAGG TTTC CCCCGCCCTTGTCCC CTATCTTCGACTTGG TERM 458 914696 - 914679 - T 100 -10.5 -5.37593 | opp_overlap 914679 914678, overlap 914671 TGTGAAAGGAAAAAA GGCGAGG TTTC CCCCGCC CTTGTCCCCTATCTT clpA 917045 - 914730 - | chaperonin clpA/B gloB 917979 - 917212 - | putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein RSP_2295 918041 - 918829 + | hypothetical protein TERM 459 919356 - 919326 - g 72 -13.2 -3.45023 | CGAGGAGCAGCAGAA GGCCATCGCCGCGG TCG CCGCGAAGATGGGC CTCTCGACGGTGACC TERM 460 919601 - 919574 - g 72 -5.4 -4.35926 | opp_overlap 919577, overlap 919575 919577 ATGTCAAACTGAAAA CCACCGTCGATG AAAG CCTCATCGGCGG TCTCGTCGTCAAGCT atpH 919132 - 919692 + | ATPase, delta (OSCP) subunit atpA 919693 - 921231 + | F0F1 ATP synthase subunit alpha TERM 461 922028 - 922006 - g 70 -13.4 -3.35996 | GAGCGCCATGGACAA TGCCACCCGC AAC GCGGGCGACA TGATCAACCGGCTCA atpG 921254 - 922123 + | F0F1 ATP synthase subunit gamma atpD 922141 - 923568 + | F0F1 ATP synthase subunit beta atpC 923578 - 923976 + | F0F1 ATP synthase subunit epsilon TERM 462 924000 - 924021 + T 100 -18.7 -4.54727 | opp_overlap 924000 AGGACAAGGAACGAA GGGCCCCGG ATTT CCGGGGCCC TTTTGCTTTGGAGAG TERM 463 924021 - 924000 - T 93 -18.7 -3.48466 | opp_overlap 924000 AGGACAAGGAACGAA GGGCCCCGG ATTT CCGGGGCCC TTTTGCTTTGGAGAG TERM 464 924331 - 924288 - T 82 -20.3 -2.52464 | gap 1 CCGCGGCGGAAGGCA GACGCGGTGTGGCCGGCCGG GCATT CCG-CCGGCCACACCGCGGG AGAGTGGCGCCGGGG prsA 925421 - 924402 - | phosphoribosyl pyrophosphate synthetase RSP_2302 926578 - 925553 - | L-threonine aldolase RSP_2303 927039 - 926578 - | hypothetical protein ribF 927999 - 927079 - | FMN adenylyltransferase / riboflavin kinase RSP_2305 928470 - 928027 - | MaoC family protein TERM 465 928668 - 928648 - R 100 -18.3 -4.46212 | TCTGCCATGAGAAAA CCCGCAGCC AGG GGCTGCGGG GCGGGAAAGGACGCG RSP_2306 929589 - 928696 - | putative HAD superfamily protein TERM 466 929694 - 929668 - R 72 -4.3 -4.59773 | gap 1, overlap 929669 929671 929673 CCGGATCTGGAAAAA GGAGAGCCCGCG GTGA CGCGGGCTG-CG GGCGCCGCCCCCCTC TERM 467 929690 - 929673 - R 72 -14.1 -3.18031 | overlap 929671 929669 929668 TCTGGAAAAAGGAGA GCCCGCG GTGA CGCGGGC TGCGGGCGCCGCCCC RSP_2307 930657 - 929740 - | putative manganese-dependent inorganic pyrophosphatase RSP_2308 930778 - 931029 + | hypothetical protein RSP_2309 932101 - 931046 - | hypothetical protein groES 932218 - 932505 + | co-chaperonin GroES groEL 932601 - 934244 + | chaperonin GroEL TERM 468 934292 - 934275 - T 78 -14.1 -3.64703 | opp_overlap 934275 TCGGTCGGATCGAAA GGGGGCC TCCG GGCCCCC TTTCTCATGCGCATC TERM 469 934275 - 934292 + T 90 -14.1 -3.96624 | opp_overlap 934275 TCGGTCGGATCGAAA GGGGGCC TCCG GGCCCCC TTTCTCATGCGCATC RSP_2312 935088 - 934513 - | hypothetical protein RSP_2313 935222 - 936208 + | 2-hydroxyacid dehydrogenase RSP_2314 936536 - 937354 + | oxidoreductase, chromogranin/secretogranin RSP_2315 937445 - 937750 + | hypothetical protein dadA 939173 - 937932 - | D-amino acid dehydrogenase RSP_2317 940365 - 939220 - | Iron-containing alcohol dehydrogenase RSP_2318 941750 - 940362 - | putative aldehyde dehydrogenase TERM 470 941329 - 941291 - G 75 -14.5 -3.30124 | opp_overlap 941292, overlap 941292 941294 TCGCATGTTTCAGAA CCACGCTGTTGCCCGCG ATCAG CGCCGGCACCAGCGTGT TGATGGTGGTGAGGT TERM 471 941328 - 941292 - G 78 -18 -2.57931 | opp_overlap 941292, overlap 941291 941294 CGCATGTTTCAGAAC CACGCTGTTGCCCGCG ATCAG CGCCGGCACCAGCGTG TTGATGGTGGTGAGG TERM 472 941292 - 941328 + g 82 -18 -3.23216 | opp_overlap 941292 941291 941294 CGCATGTTTCAGAAC CACGCTGTTGCCCGCG ATCAG CGCCGGCACCAGCGTG TTGATGGTGGTGAGG glnA 943142 - 941763 - | L-glutamine synthetase RSP_2320 944255 - 943218 - | TRAP-T family transporter periplasmic binding protein RSP_2321 945637 - 944312 - | TRAP-T family transporter RSP_2322 946143 - 945637 - | TRAP dicarboxylate family transporter DctQ subunit RSP_2323 946912 - 946148 - | hypothetical protein TERM 473 947508 - 947538 + G 81 -13.3 -3.90922 | GGCGGATCTTCGTCC TCGGCGGCCGCAT CACCC ATGCGCTCGCCGA TTATTTCGCCACCCT RSP_2324 947087 - 947953 + | RpiR family transcriptional regulator rodA 949262 - 948123 - | RodA, rod cell shape determining protein pbpA 951216 - 949270 - | peptidoglycan glycosyltransferase RSP_2327 951752 - 951213 - | hypothetical protein mreC 952647 - 951745 - | rod shape-determining protein MreC TERM 474 952665 - 952685 + r 71 -10.3 -3.79747 | GCGCTCCCTCTCAGA GCCGGCGGC GGG GCCGTCAGC TTTCGTAGTCGATCA mreB 953718 - 952681 - | rod shape-determining protein MreB TERM 475 953990 - 953974 - H 79 -7.9 -4.40804 | opp_overlap 953966, overlap 953976 953978 GACGAGCGCAGAAAA GTGAGGC GCT GCCTCGC CTGCCCGCTTTCGCC RSP_6044 954067 - 955023 + | Serine/alanine racemase VanTc3 TERM 476 955154 - 955132 - T 82 -18.4 -2.90392 | CAGGCCCGAACGAGA CGGGCCGCCC GTG AGGCGGCCCG ATCCGATGGAGCCAT TERM 477 955208 - 955180 - T 74 -13 -3.62597 | opp_overlap 955184, overlap 955181 GCCATGGTCCAATAA GGGGGCCGCCCG TCGGG CGGCCGGCCCCG CTCAGGCGTGCGAGC TERM 478 955207 - 955181 - T 74 -16.5 -2.77344 | opp_overlap 955184, overlap 955180 CCATGGTCCAATAAG GGGGCCGCCCG TCGGG CGGCCGGCCCC GCTCAGGCGTGCGAG leuA 956799 - 955210 - | 2-isopropylmalate synthase TERM 479 957013 - 957023 + H 76 -2.4 -4.72272 | AGTGCGAAAGTGACG GGGC ATG GCGC TTTTTCCTCCGGGCA ppaZ 957264 - 957722 + | PpaZ, a novel pseudoazurin precursor (blue copper protein) TERM 480 957763 - 957787 + T 74 -14.3 -3.35996 | CGTCCGCGGCCGGAA GTCCCGGCC CTCCCTC GGCCGGGAC TTCTACCTGCGGGTC RSP_2332 959725 - 958220 - | hypothetical protein nadE 959907 - 961571 + | NAD synthetase TERM 481 961580 - 961636 + T 79 -15.1 -3.34517 | gap 3, overlap 961580 CGCCTGAGACCCGCG TCGTGCGGGGGCTGCGC-GCCCCC-GCC GCCC GGCCGGGGGCCGGGCT-CCCCCGCGGGA TATTTGGACCAGACT pfkB 962621 - 961677 - | 6-phosphofructokinase wrbA 962768 - 963361 + | trp repressor binding protein WrbA, putative RSP_6045 963625 - 963386 - | hypothetical protein TERM 482 963689 - 963718 + H 78 -12 -3.69069 | overlap 963676 GGGTGCCCGCACCTT CGCGTGACGGGC CCTTTC GCCCGCCTCGCG TTCTGTTAAGGTTCG RSP_2336 963757 - 964488 + | hypothetical protein RSP_2337 964563 - 964814 + | hypothetical protein RSP_2338 964900 - 965262 + | hypothetical protein TERM 483 965311 - 965274 - T 72 -9.1 -4.08767 | CTGATCCGGGCAAAA CGGAGGGGCCTGC CACTTGACGACT GCGAGCCCCTCCG CAGCCAGAACGCCCA RSP_2339 965828 - 965250 - | hypothetical protein RSP_2340 967202 - 965892 - | MiaB-like radical SAM protein RSP_2341 968542 - 967364 - | hypothetical protein gpt 969074 - 968571 - | xanthine-guanine phosphoribosyltransferase RSP_2343 969698 - 969084 - | RhtB family threonine efflux protein fabI1 970524 - 969700 - | enoyl-(acyl carrier protein) reductase pdxH 970667 - 971269 + | pyridoxamine 5'-phosphate oxidase TERM 484 971425 - 971403 - g 78 -9.1 -4.4261 | GGTGGAAGACGAAAA GGCCCTGCA GCTTG TGCATGGCC GCGTGAAATGGTTCG RSP_2346 971386 - 971928 + | cold-shock DNA-binding protein family protein RSP_2347 971943 - 972404 + | hypothetical protein TERM 485 972877 - 972887 + T 71 -2.6 -4.59853 | TCCGACCATTACCAT TAAA CTG TTTA TTTTTAAAGACTTAC TERM 486 973031 - 973007 - T 74 -14.3 -3.39327 | opp_overlap 973007 TCTGCACAGTCAGAA GCCCGCCGA TGGCGAG TCGGCGGGC TTGCTGGTGGTGGTG TERM 487 973007 - 973031 + T 77 -15 -3.23692 | opp_overlap 973007 TCTGCACAGTCAGAA GCCCGCCGAT GGCGA GTCGGCGGGC TTGCTGGTGGTGGTG RSP_2348 973848 - 973054 - | hypothetical protein TERM 488 973908 - 973888 - R 75 -16.9 -2.90075 | opp_overlap 973892, overlap 973892 GGTGGTTCAATTATA GCAAGCCGG CGT CCGGCTTGC TGGCGGCAAATTGCG RSP_6223 974136 - 973975 - | hypothetical protein RSP_2349 974898 - 974266 - | hypothetical protein TERM 489 974947 - 974968 + r 100 -17.3 -3.96327 | GTTGATGCCCAGAGG GGGCCGGTG TTCG CACCGGCCC TTTCTCATGCAGCGT RSP_2350 975437 - 974973 - | hypothetical protein TERM 490 975496 - 975477 - R 71 -2.9 -4.57569 | GCACGTCGGGAAAAA TCTAACC TTACAT GATTAGA CGGTCAAGCGGGATT TERM 491 976119 - 976144 + r 85 -11.1 -4.35524 | opp_overlap 976119 GGCTAAGTCAGGAGA CCCCGCGCC TCGTCTCC GGCGTGGGG TTTTCCATTTCAGCG RSP_2351 978163 - 976154 - | hypothetical protein TERM 492 976516 - 976490 - G 81 -2.1 -4.91852 | overlap 976492 CTTACTAAAAACAAA CTCGCCGCGAT GGACA ATCCCGGCCGG TTCAAATTTGCCGCC TERM 493 977140 - 977159 + g 77 -4.2 -4.73613 | GCTCGGTGCGCCGTT CCAGCTCG GCGA TGATCTGG TTTTCTTCCTCGTCC TERM 494 978202 - 978188 - R 79 -5.6 -4.77173 | overlap 978190 CCTTCAGAAAACAAA CAGGCC CTC GGCCTC GGGATCGGAGTAAGC TERM 495 978200 - 978190 - R 72 -8.2 -3.99938 | overlap 978188 TTCAGAAAACAAACA GGCC CTC GGCC TCGGGATCGGAGTAA RSP_2352 979708 - 978176 - | putative terminase large subunit / phage terminase TERM 496 979325 - 979355 + g 70 -12.6 -3.31792 | opp_overlap 979306, overlap 979334 CGAGAGGGTCACATC CTCGGCGCGGAAGA CGA TCTTCTTTGCCGAG TTGTGCGCGTCATAG RSP_2353 980181 - 979786 - | hypothetical protein RSP_6046 980492 - 980178 - | hypothetical protein RSP_6047 980911 - 980495 - | hypothetical protein RSP_2354 981326 - 980904 - | hypothetical protein RSP_2356 981816 - 983288 + | hypothetical protein RSP_2355 983623 - 983273 - | HNH nuclease / phage phi-105 holin-like protein RSP_2357 984222 - 983626 - | hypothetical protein RSP_2358 985484 - 984222 - | phage phi-C31 gp36-like protein /HK97 family major capsid protein TERM 497 985125 - 985182 + g 75 -11.2 -3.91084 | gap 3, opp_overlap 985116, overlap 985118 GACATAGCCGCCGAA GGCC-TTCGCTTCGGCG-CTCGG-GGCCG GGC CGGTCGTCGTGACGCCGGGGCGGTTGGCC TTTGCTTCGAGCTGG RSP_2359 986074 - 985754 - | hypothetical protein RSP_2360 987264 - 986071 - | head HK97 family portal protein TERM 498 986097 - 986111 + g 71 -8.6 -4.08216 | opp_overlap 986097 986096 CCTCGTCGGGCAAAG GCGAAA CGG TTTCGC TTTTGCCGCCGGTCG RSP_2361 989156 - 987339 - | putative integrase/resolvase recombinase protein phage-related integrase RSP_2362 989506 - 990288 + | GntR family transcriptional regulator TERM 499 990696 - 990749 + G 71 -16.5 -2.52464 | TGACGGATGCGGAGG CGATGACCGCCGCGGCCGCCGCGGC GGAA GCCGTGGCGCCGGTGTCGATCCTCG TCAATTCCGCGGGCA RSP_2363 990482 - 991246 + | Short-chain dehydrogenase/reductase fucA 991251 - 991907 + | L-fuculose phosphate aldolase (class II) RSP_2365 991973 - 992935 + | ABC sugar (ribose) transporter, periplasmic substrate-binding subunit RSP_2366 993119 - 994627 + | ABC sugar (ribose) transporter, fused ATPase subunits RSP_2368 994634 - 995638 + | ABC sugar (ribose) transporter, inner membrane subunit RSP_2367 995642 - 996619 + | ABC sugar (ribose) transporter, inner membrane subunit RSP_2370 996635 - 997585 + | putative sugar kinase RSP_2371 997596 - 998342 + | 3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR RSP_2372 998596 - 1000014 + | aldehyde dehydrogenase (NAD-dependent) RSP_2373 1000011 - 1001180 + | MFS family transporter RSP_2374 1001413 - 1001937 + | hypothetical protein RSP_2375 1002024 - 1003469 + | hypothetical protein kbl 1003514 - 1004704 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 1004704 - 1005729 + | L-threonine 3-dehydrogenase cypC 1007243 - 1005921 - | putative fatty acid beta hydroxylase (cytochrome P450) TERM 500 1007321 - 1007298 - R 91 -19.6 -3.38291 | GCCAGAATCTCAGAA GCTGGCCCCC GGAC GGGGGCCAGC TTCCAATGCTGCGCA RSP_2379 1007608 - 1007354 - | hypothetical protein catC 1009776 - 1007644 - | catalase RSP_6048 1010425 - 1009898 - | hypothetical protein TERM 501 1010175 - 1010186 + g 74 -7.2 -4.24948 | GCCTCGGGGTCGAGC GCGG CCCA CCGC TTTTCCATCTCGTCG RSP_2381 1010544 - 1011098 + | 3-methyladenine DNA glycosylase RSP_6049 1011171 - 1011332 + | hypothetical protein TERM 502 1011356 - 1011390 + T 100 -17.2 -4.07687 | opp_overlap 1011362, overlap 1011362 GGAGGGTTGCGACAT GAAAAAGGCTCCGGTC TGT GACCGGAGCCTTCTGC TTTTCAGGACAGCCT TERM 503 1011384 - 1011362 - T 100 -19.2 -4.8048 | opp_overlap 1011356 1011362 TTGCGACATGAAAAA GGCTCCGGTC TGT GACCGGAGCC TTCTGCTTTTCAGGA TERM 504 1011362 - 1011384 + T 95 -19.2 -3.68359 | opp_overlap 1011362, overlap 1011356 TTGCGACATGAAAAA GGCTCCGGTC TGT GACCGGAGCC TTCTGCTTTTCAGGA RSP_2382 1012514 - 1011405 - | hypothetical protein RSP_2383 1012915 - 1012514 - | putative integral membrane protein RSP_6050 1013726 - 1012902 - | hypothetical protein TERM 505 1013404 - 1013445 + g 71 -6.4 -4.20696 | overlap 1013389 1013419 TCGAGCGTGTGGATC GCGCGATGGATCATCTGC GGCGGG GCAGGGGCATCGTCGCGC TTTTCCGCTTCCTCG RSP_2384 1013866 - 1014426 + | hypothetical protein RSP_2385 1014868 - 1014506 - | hypothetical protein TERM 506 1014845 - 1014869 + g 75 -14.3 -3.53563 | GAGGTCTGACGGACC CGTGCCCGG CCCACAT CCGGGCACG TTTGCCCGGGCATAT TERM 507 1014900 - 1014941 + H 100 -16.5 -4.08767 | overlap 1014903 GCCCCATGCCCGGAC AGTGCGGAGCGCAGCCTTC CCCC GGAGGCTGCGCTCCGGTCA TTTTAAGACCATGAG TERM 508 1014903 - 1014938 + H 91 -21.2 -3.08211 | overlap 1014900 CCATGCCCGGACAGT GCGGAGCGCAGCCTTC CCCC GGAGGCTGCGCTCCGG TCATTTTAAGACCAT RSP_6224 1015271 - 1015651 + | hypothetical protein mtnA 1016748 - 1015654 - | methylthioribose-1-phosphate isomerase RSP_2387 1017294 - 1016860 - | hypothetical protein RSP_2388 1017866 - 1017366 - | hypothetical protein TERM 509 1017879 - 1017895 + H 72 -15.1 -2.93348 | overlap 1017874 CATATGCCTCTCCCG CCGGGCC TAG GGCCCGG TCTCATCTTGGTCGG RSP_2389 1018151 - 1018681 + | putative glutathione peroxidase TERM 510 1019535 - 1019558 + G 78 -11.6 -3.99324 | overlap 1019531 TTCGAGGTGGTGGCG GCGCTGCGTC CGGT GGCGCCGCGC TTTCTCGTGCTGGGC acuC1 1018710 - 1019819 + | putative acetoin utilization protein RSP_2391 1019816 - 1020370 + | 2'-5' RNA ligase RSP_2392 1020938 - 1020381 - | putative membrane protein, periplasmic nitrate reductase NnuR kdtA 1022454 - 1021231 - | putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) TERM 511 1021753 - 1021698 - G 93 -20.5 -3.44051 | GCGCGATCACCAGAA GGTCGAAGAGGTCGCGGGCGCTGC-GG AAGG CCTGCAGCAC-CGCGGCCTCCTCGCCC TCGTGGGTCGAGGCC RSP_2395 1022619 - 1023662 + | BCCP, cytochrome c peroxidase TERM 512 1023683 - 1023712 + T 72 -15.7 -2.87683 | overlap 1023687 CGTCCCGTCTGAAGG GCAAGGGCGGTCC CGCG GGGCCGCCCTTTC TCTCTACGCGGATCT TERM 513 1023687 - 1023708 + T 95 -15.1 -4.12532 | overlap 1023683 CCGTCTGAAGGGCAA GGGCGGTCC CGCG GGGCCGCCC TTTCTCTCTACGCGG RSP_2396 1024738 - 1023737 - | hypothetical protein RSP_2397 1026049 - 1025030 - | ABC putrescine transporter, periplasmic substrate-binding subunit RSP_2398 1026877 - 1026077 - | ABC putrescine transporter, inner membrane subunit RSP_2399 1027763 - 1026870 - | ABC putrescine transporter, inner membrane subunit RSP_2400 1028769 - 1027765 - | ABC putrescine transporter, ATPase subunit TERM 514 1027855 - 1027801 - G 72 -12.5 -3.53012 | opp_overlap 1027807 GGCGCCCGGTGCAAA GCGCAGGCCCGCGGGCTGGCCGGGG GCGAG CCCCGGATCGCCCGAGGCGCTGCTC TGCAGGCGCGCCACC RSP_2401 1030317 - 1028860 - | putative 6-aminohexanoate-cyclic-dimer hydrolase TERM 515 1030536 - 1030495 - H 72 -5.8 -4.25283 | gap 2, overlap 1030500 ATGGCCGGATGAAAA GGGAA-CGCGGTGC-GGGGA GATC TCCCCAACTCCGCGGCTGCC CCCGCAACTGTAGGC RSP_2402 1030777 - 1032612 + | putative TonB dependent vitamin B12 outer membrane receptor TERM 516 1032656 - 1032683 + G 78 -17.7 -2.64933 | overlap 1032642 CTTGCCGCCGCCGCT CCCGCCGTGGC CGAGGC GCCGCGGCGGG TGGTGTCGATCAATC RSP_2403 1032599 - 1033459 + | ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit RSP_2404 1033456 - 1034445 + | ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit RSP_2405 1034442 - 1035194 + | ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit RSP_2406 1035191 - 1035850 + | hypothetical protein RSP_2407 1037728 - 1035995 - | periplasmic sensor hybrid histidine kinase TERM 517 1036678 - 1036657 - G 70 -12.9 -3.31144 | CCTCGATGCGGAGAA GCGGGCGCG GCCC CGCGCCCTC GATCCGGGCCTCGAC RSP_2408 1038017 - 1037772 - | hypothetical protein rluD 1038091 - 1039140 + | ribosomal large subunit pseudouridine synthase D rpoH1 1039301 - 1040197 + | RNA polymerase factor sigma-32 TERM 518 1040216 - 1040245 + T 100 -23.7 -3.54459 | opp_overlap 1040221, overlap 1040221 GGGCGATGTATCGGA GCAAAGGCCGGGC ACCC GCCCGGCCTTTGC TTTGGCGCGGCTTCC TERM 519 1040240 - 1040221 - T 90 -16.4 -3.74872 | opp_overlap 1040216 1040221 ATGTATCGGAGCAAA GGCCGGGC ACCC GCCCGGCC TTTGCTTTGGCGCGG TERM 520 1040221 - 1040240 + T 100 -16.4 -4.05788 | opp_overlap 1040221, overlap 1040216 ATGTATCGGAGCAAA GGCCGGGC ACCC GCCCGGCC TTTGCTTTGGCGCGG TERM 521 1040266 - 1040288 + T 82 -6.9 -4.77036 | CGCGGCTTCCGTTCG CGAACCCGG GGGAG TCGGGTACG TTTTTGCTCCTGGAC RSP_2411 1041555 - 1040755 - | hypothetical protein TERM 522 1041614 - 1041591 - R 100 -13.2 -4.564 | gap 1, overlap 1041593 AACTCCAAACGAAAA TAGTGCGGGGC CAG GCCCCGCAC-A GGATGCTAACAATCG TERM 523 1041613 - 1041593 - R 100 -18.3 -3.88396 | overlap 1041591 CTCCAAACGAAAATA GTGCGGGGC CAG GCCCCGCAC AGGATGCTAACAATC pepF 1043460 - 1041640 - | oligoendopeptidase F lig2 1045233 - 1043632 - | ATP-dependent DNA ligase RSP_2414 1046381 - 1045230 - | hypothetical protein TERM 524 1045601 - 1045560 - G 70 -14.3 -3.24747 | gap 1 GTCGGACATGACGAA GCCCTGCGCGA-GGCCGCGG CGG CGGCGGACGCCGCGCAGCGC CATCCAGCCCGAGGC TERM 525 1045642 - 1045621 - G 79 -13.7 -3.60296 | CAGCCCGAGGCGAAA GCCTCGGCC GAGG GGCCGAAGC GCGTGGCCCAGGGGG RSP_2415 1046578 - 1047969 + | hypothetical protein RSP_2416 1047977 - 1048927 + | hypothetical protein RSP_2417 1048924 - 1049733 + | hypothetical protein RSP_2420 1049765 - 1050490 + | hypothetical protein pldB 1051433 - 1050480 - | putative esterase/lipase/thioesterase RSP_2419 1051714 - 1051430 - | hypothetical protein RSP_2421 1051790 - 1052362 + | hypothetical protein TERM 526 1052774 - 1052812 + G 73 -13.8 -3.30771 | overlap 1052802 CGGGGCGCCATTGCC GCGCTGGTGCCGCATG TGACCTT CCTGCGGCGCGAGCGC TTCTCGACCCTCTCC TERM 527 1053433 - 1053449 + G 75 -13.7 -3.49102 | TGCGCGCCTGCACTC GCCGCAC GAG GTGCGGC TTCTCTGGGACGTCT mgpS 1052447 - 1055239 + | putative ATP-dependent helicase, MgpS RSP_2423 1055245 - 1055541 + | putative heat shock protein 15 (HSP15) RSP_2424 1055596 - 1055934 + | ferredoxin II TERM 528 1056082 - 1056111 + F 76 -7.9 -4.37092 | gap 1, overlap 1056083 GCACGGAAGCCTTCA CCCACCTCGCAGCT CTC AGCT-TGAGGTGGA TTTTCTAGCGACCAT TERM 529 1056138 - 1056161 + F 72 -13.8 -3.24245 | overlap 1056133 CCATTCCACCCGCAT CGCCCGGACC GGAA GTTCCGGGCG TTGGATTGTCCGTCG RSP_2425 1056214 - 1056723 + | CarD family transcriptional regulator TERM 530 1056765 - 1056748 - T 93 -14.1 -4.17762 | opp_overlap 1056748 CAGGCGCGAAAAGAA CCGCGGC CCCG GCCGCGG TTTTTTCATGCCCAT TERM 531 1056748 - 1056765 + T 100 -14.1 -5.14965 | opp_overlap 1056748 CAGGCGCGAAAAGAA CCGCGGC CCCG GCCGCGG TTTTTTCATGCCCAT cobV 1057660 - 1056911 - | cobalamin-5'-phosphate synthase TERM 532 1058253 - 1058276 + G 74 -9.4 -4.07568 | opp_overlap 1058250 1058247, overlap 1058254 TCGGCAACACGACGG CCGCGGCGGC CATT GCGGCCGCGC TTTTCGGCGGCACGG cobT 1057742 - 1058758 + | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase RSP_2429 1060742 - 1058814 - | glutathione-regulated potassium-efflux system protein, kefB RSP_6052 1063733 - 1060857 - | hypothetical protein TERM 533 1061616 - 1061646 + g 79 -17.5 -3.10464 | opp_overlap 1061609, overlap 1061614 GGGGAAGATCGACCC GGGCGCGGCCGGC GCAGG GTCGGCCGCGGCC TCTTCCGGTTCCTCG TERM 534 1062080 - 1062106 + g 85 -15 -3.80573 | CGGCAGGCGCCTCTG CGGCCGCCTCCG GCT CGACGGCGGCCG TTTCCTCCTCGTCCG TERM 535 1062481 - 1062516 + g 71 -6.7 -4.25104 | overlap 1062431 1062482 ACGCGCACGCGCACC CCCTGTTCGGCCACC TGCGCC GGAGGACGGACAGGC TTTTCCTCGGCGGCG TERM 536 1063131 - 1063114 - G 70 -9.8 -3.85817 | ACCTCGTCGGACAAA GCCGCC TCCAGC GGCGGC TCCTCGGCGAGCGGT TERM 537 1063837 - 1063826 - H 91 -2.2 -5.38326 | overlap 1063829 CGAATGAAAGAAAAA GACC CAAG GATC GGCTTGCTGGCTGCG RSP_2430 1063855 - 1064589 + | hypothetical protein TERM 538 1064629 - 1064594 - T 93 -16.2 -3.94811 | overlap 1064595 AACAGCAGTGACAAA GTCTTCGGAGGCGATC TTCG GATCGCCTCCGAAGGT GGCCGTCAGGCCGTC TERM 539 1064628 - 1064595 - T 84 -19.7 -2.96164 | overlap 1064594 ACAGCAGTGACAAAG TCTTCGGAGGCGATC TTCG GATCGCCTCCGAAGG TGGCCGTCAGGCCGT RSP_2431 1065927 - 1064635 - | putative O-acetylhomoserine sulfhydrylase RSP_2432 1066517 - 1066170 - | hypothetical protein cheY2 1066900 - 1066514 - | chemotaxis response regulator, CheY2 TERM 540 1066658 - 1066668 + g 82 -4.6 -4.77165 | GAGGATGAAACCCAT CCGC TGC GTGG TTTTGTTCTCGCGGA cheR1 1067795 - 1066878 - | putative MCP methyltransferase, CheR1 cheW1 1068250 - 1067792 - | putative chemotaxis scaffold protein, CheW1 cheA1 1070312 - 1068252 - | chemotaxis histidine protein kinase, CheA1 TERM 541 1069461 - 1069476 + g 85 -4 -5.03314 | gap 1, overlap 1069464 CGAGGAGGTCCGGTG GTCCTCC GCA GGAG-AC TTTTTTGCCGCTGCG cheY1 1070688 - 1070320 - | chemotaxis response regulator, CheY1 cheX 1070963 - 1070679 - | putative CheX protein cheD 1071559 - 1070960 - | chemoreceptor glutamine deamidase CheD mcpA 1073994 - 1071682 - | methyl accepting chemotaxis protein TERM 542 1072341 - 1072388 + g 78 -12 -3.90744 | gap 1, overlap 1072347 CCGAAACTGTTAGCC CGTCAAGCGCTGCCGCTGTCTCT TCC AGAG-TGGCGGCGGTGCTTTCCG TTCTTTGAGCCAGAG TERM 543 1072347 - 1072382 + g 81 -12.6 -3.89435 | gap 1, overlap 1072341 CTGTTAGCCCGTCAA GCGCTGCCGCTGTCTCT TCC AGAG-TGGCGGCGGTGC TTTCCGTTCTTTGAG tlpS 1075888 - 1074101 - | methyl-accepting chemotaxis sensory transducer mcpB 1077674 - 1075992 - | methyl accepting chemotaxis protein, McpB TERM 544 1076228 - 1076202 - G 70 -2.9 -4.56597 | gap 1, opp_overlap 1076209 1076220 GTCGGTCGTGAAAAA GCCG-ATTGCTG TCCG CAGCTGTTCGGC CTGTCCGGCCAGCTG cheY5 1078131 - 1077763 - | putative chemotaxis response regulator, CheY5 RSP_2444 1078457 - 1078128 - | hypothetical protein TERM 545 1079348 - 1079365 + G 71 -8.3 -4.12188 | CTGCCGATCTTCGCC GACCGCG AGGC CGCGGCC TTTTCGGCCTGGTAC RSP_2445 1078538 - 1080742 + | putative Alpha amylase TERM 546 1083132 - 1083171 + G 80 -17.1 -3.14344 | CGTGAGCCTGCGCCC GGCGGAGGGCGAGGCGA CCGTCC TCGCCGCGGCCTTCGCC TTCGTGGCCAACATG RSP_2446 1080739 - 1084047 + | putative trehalose synthase glgB1 1084044 - 1086230 + | glycogen branching enzyme RSP_2449 1086227 - 1088293 + | putative glycosyl hydrolase RSP_2450 1088290 - 1090068 + | putative Alpha-amylase RSP_2451 1090065 - 1091882 + | putative 4-alpha-glucanotransferase TERM 547 1093922 - 1093960 + G 80 -16.6 -3.17688 | overlap 1093909 1093943 GAGGCGGCCTTCTGC GCCTTTATCGGGCGCGCC TTG GGCGCGCCCGACAGCGAC TTCCTGCGCTCCTTC RSP_2452 1091879 - 1094494 + | alpha amylase domain-containing protein TERM 548 1094507 - 1094530 + T 78 -16.7 -3.02144 | opp_overlap 1094497 1094495 TAACAGTCGGCAGGA GCGCCGCCC TCAGGC GGGCGGCGC TCTTAAAGGACCTGC RSP_2453 1095218 - 1094553 - | putative oxidoreductase (NAD/NADP dependent) TERM 549 1095268 - 1095243 - R 93 -14 -4.18018 | gap 1 CCTTCTGACTGAAAA GCGCCG-CGGC TCGGG GCCGGCGGCGC TTCAGCCTATGGCGG purF 1096801 - 1095338 - | amidophosphoribosyltransferase RSP_2455 1097500 - 1096886 - | putative colicin V production protein, dedE radA 1098877 - 1097519 - | DNA repair protein RadA TERM 550 1097870 - 1097830 - G 76 -8.8 -4.26076 | overlap 1097832 CCACGTTGAGGAAAA CATCGAGGCCCGCGAAGG GGATA CCGCAGCGCGCCTCGAGG ACGGCGAGGATGGTC TERM 551 1097868 - 1097832 - G 70 -10 -3.7331 | overlap 1097830 ACGTTGAGGAAAACA TCGAGGCCCGCGAAGG GGATA CCGCAGCGCGCCTCGA GGACGGCGAGGATGG TERM 552 1098086 - 1098044 - G 80 -12 -4.03234 | opp_overlap 1098045, overlap 1098046 GCGGTCGGACAGAAA GA-GGGCGGAGGGGTTCGCG ACCTG CGCGAGCCCG-CCGCCCGTC ATCTCGAAGACGCCG TERM 553 1098083 - 1098046 - G 82 -14.8 -3.61232 | gap 1, opp_overlap 1098045, overlap 1098044 GGTCGGACAGAAAGA GGGCGGAGGGGTTCGCG ACCTG CGCGAGCCCG-CCGCCC GTCATCTCGAAGACG RSP_2457 1099435 - 1099010 - | hypothetical protein RSP_2458 1100182 - 1099436 - | ABC transporter, ATPase subunit RSP_2459 1100961 - 1100179 - | ABC transporter, inner membrane subunit alr 1102007 - 1100958 - | alanine racemase fabG 1102236 - 1102973 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 554 1102988 - 1102978 - f 71 -2.4 -4.57569 | overlap 1102979 CGATGCTGTGAAAAA GGCC GAT GGAC GTGCGGCACTTTCGG acpP 1103152 - 1103385 + | acyl carrier protein TERM 555 1103420 - 1103446 + F 100 -21.6 -4.98531 | CCTGGGCATTTCGGA CCCCCGTCGAGC GGC GCTCGGCGGGGG TTTTTCGTTTCCGGA fabF 1103882 - 1105144 + | 3-oxoacyl-(acyl carrier protein) synthase II RSP_2465 1105141 - 1106322 + | hypothetical protein TERM 556 1106443 - 1106479 + G 82 -14.3 -3.85698 | overlap 1106449 CAGGATGGAAGAGGT GGGCAAGCGGCACGGGG CAA CCCGGGGCCGCTTTTCC TTTGTCCGGCCGAGC TERM 557 1106449 - 1106473 + G 100 -12.7 -4.61873 | overlap 1106443 GGAAGAGGTGGGCAA GCGGCACGGGG CAA CCCGGGGCCGC TTTTCCTTTGTCCGG RSP_2466 1106432 - 1106836 + | hypothetical protein RSP_2467 1106883 - 1108127 + | putative large terminase TERM 558 1108383 - 1108410 + G 70 -13.4 -3.30124 | overlap 1108384 1108386 TCGGTCAAGCTGATC TCGGAGGCGGCG GCCG CGCTGCCTCTGG TTCTGCAGGATGCGG RSP_2468 1108200 - 1109375 + | putative portal protein RSP_2469 1109377 - 1109610 + | hypothetical protein RSP_2470 1109615 - 1110178 + | prohead peptidase TERM 559 1110295 - 1110326 + G 82 -13.6 -3.72695 | TCCGCAGGCCCCGAT CCGGCCGTGGAGGC GAAA GCCGCAATGGCCGG TTTCCTGAAGGAGAT RSP_2471 1110244 - 1111440 + | phage phi-C31 gp36 major capsid-like protein RSP_2472 1111535 - 1112134 + | hypothetical protein RSP_6053 1112134 - 1112469 + | putative phage tail-head adaptor RSP_6054 1112466 - 1112864 + | hypothetical protein TERM 560 1113138 - 1113171 + G 72 -11.7 -3.62572 | gap 1, overlap 1113134 GACGGACGAGCGGGC GCGGGCGCTCTTCTTC GCC GGAGAGGCGC-CCCGC TTTCAGGTGGTGATC RSP_2473 1112902 - 1113315 + | hypothetical protein RSP_2474 1113315 - 1113833 + | hypothetical protein RSP_2475 1113856 - 1114476 + | putative phage tail minor protein RSP_2476 1114486 - 1115118 + | hypothetical protein RSP_2477 1115118 - 1116002 + | hypothetical protein RSP_2478 1115999 - 1116439 + | hypothetical protein TERM 561 1119753 - 1119793 + G 72 -12.5 -3.53444 | overlap 1119750 GTGGGAGCTCTTCCA GTTCGCGGACGCGCGGC TGGTTTC GCCGCGGGTCTGGGAGC TTTCGCGCAGGCTCC RSP_2479 1116439 - 1120329 + | putative phage host specificity protein RSP_2480 1120333 - 1120746 + | hypothetical protein cysE 1120739 - 1121545 + | serine O-acetyltransferase TERM 562 1121561 - 1121592 + T 100 -24.6 -3.25823 | opp_overlap 1121561 1121564, overlap 1121564 GCTGCCCGACATGAA GAAGGGGCCGATCC GCAA GGATCGGCCCCTTC TTCATGTCCAGAGCG TERM 563 1121592 - 1121561 - T 100 -24.6 -3.25823 | opp_overlap 1121561 1121564, overlap 1121564 GCTGCCCGACATGAA GAAGGGGCCGATCC GCAA GGATCGGCCCCTTC TTCATGTCCAGAGCG TERM 564 1121564 - 1121589 + T 100 -20.5 -3.7732 | opp_overlap 1121561 1121564, overlap 1121561 GCCCGACATGAAGAA GGGGCCGATCC GCAA GGATCGGCCCC TTCTTCATGTCCAGA TERM 565 1121589 - 1121564 - T 100 -20.5 -3.7732 | opp_overlap 1121564 1121561, overlap 1121561 GCCCGACATGAAGAA GGGGCCGATCC GCAA GGATCGGCCCC TTCTTCATGTCCAGA pdhB 1122973 - 1121645 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 566 1122403 - 1122363 - G 75 -15.9 -3.05463 | opp_overlap 1122365 1122369 1122372, overlap 1122349 AGCTTCGCCACCGAA GCCGCGGAGGCGGCCGGCG CGG CGACGGGCGCGGCCGCAGC GGCGGGCGCTTCTGC TERM 567 1122365 - 1122419 + g 71 -15.4 -3.05384 | opp_overlap 1122363, overlap 1122369 1122372 CTTCGCCACCGAAGC CGCGGAGGCGGCCGGCGCGGCGACGG GCG CGGCCGCAGCGGCGGGCGCTTCTGCC TTCGGTGCCGCGGCG TERM 568 1122369 - 1122415 + g 71 -15.6 -2.54896 | opp_overlap 1122363, overlap 1122365 1122372 GCCACCGAAGCCGCG GAGGCGGCCGGCGCGGCGACGG GCG CGGCCGCAGCGGCGGGCGCTTC TGCCTTCGGTGCCGC TERM 569 1122372 - 1122412 + g 73 -13.7 -3.4285 | opp_overlap 1122363, overlap 1122369 1122365 ACCGAAGCCGCGGAG GCGGCCGGCGCGGCGACGG GCG CGGCCGCAGCGGCGGGCGC TTCTGCCTTCGGTGC pdhAb 1124375 - 1122984 - | pyruvate dehydrogenase subunit beta TERM 570 1124071 - 1124085 + g 72 -3.4 -4.50058 | overlap 1124048 CCTTCCGAGGCTTCG GCGGGC TCG GGCTGC TTTTCCTTCTGGGTC pdhAa 1125378 - 1124389 - | pyruvate dehydrogenase E1 component, alpha subunit TERM 571 1125352 - 1125363 + g 70 -2.2 -4.4648 | overlap 1125345 CTTCGATGCGTTGGA TTGC TCCG GCGA TTTTCTGGTGGCCAT RSP_4046 1125903 - 1125601 - | hypothetical protein fbaB 1127111 - 1126182 - | fructose-bisphosphate aldolase pgk 1128406 - 1127213 - | phosphoglycerate kinase TERM 572 1128686 - 1128665 - g 70 -13.7 -3.22388 | opp_overlap 1128684 CAGCGAACGGATGAA GGCCCTGGC CCGC GCCAAGGCC TATGACAACGTGGTC TERM 573 1129019 - 1128992 - g 70 -12.6 -3.31792 | overlap 1128994 GGAGCATGTGGACAA GATCGCCCGCGG CGAG CCGCCGGCGAAC CCGGACAAGATGCTG TERM 574 1129017 - 1128994 - g 70 -13.8 -3.22653 | overlap 1128992 AGCATGTGGACAAGA TCGCCCGCGG CGAG CCGCCGGCGA ACCCGGACAAGATGC RSP_4043 1128555 - 1129064 + | peptidylprolyl isomerase RSP_4042 1129054 - 1129647 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 575 1129715 - 1129732 + T 86 -10.5 -4.65895 | opp_overlap 1129715 TTGGGCAGAGTGAAA GGGCGCC GGAA GGCGTCC TTTTTGCGTCCGGCC tyrS 1131141 - 1129891 - | tyrosyl-tRNA synthetase TERM 576 1131624 - 1131642 + G 70 -13.1 -3.39668 | overlap 1131615 GGCGGCCGGCGGGCA GGGCGCG CCGCT CGCGCCC TTCTACCATTTCGCC anmK 1131217 - 1132332 + | anhydro-N-acetylmuramic acid kinase RSP_2490 1132792 - 1132370 - | hypothetical protein RSP_6057 1132955 - 1133191 + | hypothetical protein TERM 577 1133238 - 1133213 - T 100 -21.9 -4.18018 | overlap 1133181 GCGCGGCAGGCAAAA GGCCCGGACGC ATGC GCGTCCGGGCC TTCGCATGTCCGGGG eno 1134539 - 1133262 - | enolase RSP_2492 1135458 - 1134574 - | RhaT family protein TERM 578 1134866 - 1134834 - G 73 -10.4 -3.78934 | CCGCGCCCAGAAGAA GGGCCGCCTGTCCC GGTGT GGGCCAGGTGGCGC CGCCGCCCACGGCCA fur 1135936 - 1135523 - | FUR family manganese uptake regulator TERM 579 1139364 - 1139349 - g 71 -6.1 -4.2558 | CACGCCTCAGGAAAA GGCCA TCGTGC TGGCC GAGAAGATCGTCGAG nrd 1136518 - 1140174 + | ribonucleotide-diphosphate reductase subunit alpha RSP_2496 1140547 - 1141047 + | hypothetical protein RSP_2497 1141934 - 1141281 - | ATPase RSP_2500 1143090 - 1144292 + | hypothetical protein TERM 580 1144316 - 1144336 + T 100 -19.7 -4.05446 | TTTCGGGTTTTCATG CGGCCGCCC TCC GGGCGGCCG TTTCTCATTCCGGCC RSP_2501 1145786 - 1144947 - | hypothetical protein glmS 1147958 - 1146147 - | D-fructose-6-phosphate amidotransferase glmU 1149322 - 1147958 - | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase gph 1149423 - 1150112 + | phosphoglycolate phosphatase creA 1150704 - 1150144 - | CreA family protein ivdH 1150728 - 1151885 + | isovaleryl-CoA dehydrogenase ompW 1152587 - 1151976 - | outer membrane protein mccB 1152653 - 1154329 + | methylcrotonyl-CoA carboxylase beta chain mccA 1154426 - 1156366 + | 3-methylcrotonoyl-CoA carboxylase, alpha subunit hmgL 1156359 - 1157243 + | hydroxymethylglutaryl-CoA lyase RSP_2511 1157256 - 1158044 + | enoyl-CoA hydratase nuoA 1158265 - 1158630 + | NADH dehydrogenase subunit A nuoB 1158627 - 1159151 + | NADH dehydrogenase subunit B nuoC 1159162 - 1159764 + | NADH dehydrogenase subunit C nuoD 1159769 - 1160983 + | NADH dehydrogenase subunit D TERM 581 1161858 - 1161816 - g 75 -14.6 -3.28712 | overlap 1161799 1161798 GGGCCGGCCCGAGAA GCCGGGCGTGGCCACGGGCG GCA CGGCCACGGCCGAGCCGGGC GCGCAGACCTCCGAT nuoE 1160983 - 1161894 + | NADH dehydrogenase subunit E RSP_2517 1161894 - 1162106 + | hypothetical protein nuoF 1162117 - 1163412 + | NADH dehydrogenase I subunit F RSP_2519 1163417 - 1163776 + | hypothetical protein nuoG 1163936 - 1165900 + | NADH dehydrogenase subunit G RSP_2520 1165904 - 1166314 + | hypothetical protein nuoH 1166342 - 1167379 + | NADH dehydrogenase subunit H nuoI 1167381 - 1167884 + | NADH dehydrogenase subunit I RSP_2524 1167881 - 1168291 + | carboxymuconolactone decarboxylase family protein nuoJ 1168288 - 1168902 + | NADH dehydrogenase subunit J nuoK 1169062 - 1169367 + | NADH dehydrogenase subunit K nuoL 1169373 - 1171535 + | NADH dehydrogenase subunit L nuoM 1171535 - 1173076 + | NADH dehydrogenase subunit M nuoN 1173087 - 1174523 + | NADH dehydrogenase subunit N birA 1174540 - 1175268 + | putative biotin protein ligase RSP_2533 1175279 - 1176052 + | pantothenate kinase RSP_2534 1176049 - 1177722 + | metallo-beta-lactamase superfamily hydrolase TERM 582 1177751 - 1177770 + T 100 -16.4 -4.41494 | opp_overlap 1177751 TGTCCCATCGATAAA GGGCCGGC GGAA GCCGGCCC TTTTCGTTGAAGCTA TERM 583 1177770 - 1177751 - T 93 -16.4 -3.91897 | opp_overlap 1177751 TGTCCCATCGATAAA GGGCCGGC GGAA GCCGGCCC TTTTCGTTGAAGCTA rhlE 1180076 - 1178520 - | ATP-dependent helicase, DEAD-box TERM 584 1180296 - 1180266 - R 78 -16.9 -3.01712 | opp_overlap 1180254 TTTCGGGCTGGAAGA GGCAGCCGCG-GGCG AGG CGCCGCGCGGC-GCC CCGGTTCAGACCATC prfC 1181906 - 1180302 - | peptide chain release factor 3 fabG 1182066 - 1182845 + | Short-chain dehydrogenase/reductase TERM 585 1183819 - 1183862 + G 79 -13.1 -3.85698 | GGCCGAACCCCACGC CCGCCGAGGGCA-CGCCCGCC CGCG GGCGGGTGGTGCGCGCG-CGG TTTCTCGGCCGCGAG RSP_2539 1182882 - 1184018 + | ABC transporter, ATPase subunit TERM 586 1184099 - 1184087 - f 90 -4.7 -5.24129 | CCCCGGGACAAAAAA CGCGG AGG CGGCG CGAAAGGGTCTTTGA tatA 1184186 - 1184398 + | twin-arginine translocation system protein, TatA tatB 1184409 - 1184885 + | twin-arginine translocation system protein, TatB tatC 1184882 - 1185751 + | twin-arginine translocation system protein, TatC RSP_2542 1185748 - 1186587 + | ATPase TERM 587 1186612 - 1186650 + T 100 -18.3 -4.386 | opp_overlap 1186617 GGCGAACCTCGACAT GAAAACTGCCGCAGCAC TTCAT GTGCTGCGGTAGTTTGC TTTTCTAACCCCTTG TERM 588 1186645 - 1186617 - T 95 -14.6 -4.3467 | opp_overlap 1186612 ACCTCGACATGAAAA CTGCCGCAGCAC TTCAT GTGCTGCGGTAG TTTGCTTTTCTAACC RSP_2543 1187881 - 1186682 - | peptidoglycan-binding LysM ( peptidase) RSP_2544 1188664 - 1188005 - | protein-L-isoaspartate O-methyltransferase surE 1189446 - 1188661 - | 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase exoY 1190333 - 1190944 + | exopolysaccharide production protein exoY TERM 589 1190967 - 1190992 + F 74 -13.2 -3.36273 | CTCCTTTTGGCAGCG GCCGCGGCGG AAGCTC CCGCCGCGCC TTCATGTTCAGAAAG exoF 1191016 - 1192248 + | Outer membrane polysaccharide export protein, exoF TERM 590 1192286 - 1192310 + T 100 -13.6 -5.24531 | gap 1 GGAACGCTGACTTGA GGAGGGCGCCG GCCG CGGC-CCCTCC TTTTTTATGGGCGGT exoQ 1193713 - 1192424 - | putative polysaccharide polymerase exoK 1194512 - 1193730 - | endo-beta-1,3-1,4-glycanase protein exoO 1194718 - 1196148 + | glycosyl transferase family protein exoU 1197120 - 1196164 - | glycosyl transferase family protein TERM 591 1197112 - 1197125 + g 72 -5.9 -4.4078 | GATGATGACGCAGAT GTCGC TCAT GCGGC TTTTCCTTCACGGCG RSP_2553 1198253 - 1197117 - | hypothetical protein RSP_2554 1198599 - 1198751 + | hypothetical protein RSP_2555 1198838 - 1199098 + | hypothetical protein RSP_2556 1199109 - 1199582 + | hypothetical protein asnB 1199579 - 1201459 + | putative asparagine synthetase RSP_2558 1201456 - 1202376 + | Hpr(Ser) kinase/phosphatase RSP_2559 1202442 - 1204229 + | ABC transporter, fused ATPase and inner membrane subunits RSP_6060 1204620 - 1204363 - | hypothetical protein TERM 592 1204748 - 1204774 + r 71 -9.5 -3.81539 | opp_overlap 1204741 1204740, overlap 1204743 1204750 CCGAAAATCGGCGGA GAT-GCCGCGCCC GAT GGGC-CGGCAATC TTTGCATGTTTCGCT TERM 593 1204966 - 1204945 - R 90 -12.9 -4.50058 | overlap 1204946 CAGCCAGAATGAAAA GGCCCCGGC GGGA GCCGGGGCG CTGTAAGCCCATGCC TERM 594 1204965 - 1204946 - R 82 -16.4 -3.29312 | overlap 1204945 AGCCAGAATGAAAAG GCCCCGGC GGGA GCCGGGGC GCTGTAAGCCCATGC exoP 1207308 - 1204993 - | putative succinoglycan biosynthesis transport protein ExoP exoM 1208339 - 1207359 - | succinoglycan biosynthesis protein exoM exoA 1209325 - 1208336 - | glycosyl transferase family protein exoL 1210491 - 1209322 - | glycosyltransferase, succinoglycan biosynthesis protein exoL ugpG 1211451 - 1210513 - | UDP-glucose pyrophosphorylase sqdC 1212622 - 1211807 - | putative sulfolipid biosynthesis protein sqdD 1213389 - 1212607 - | glycosyl transferase (sulfolipid biosynthesis) protein TERM 595 1212840 - 1212820 - G 70 -13.3 -3.30441 | GAGCATGTTGCAGAA GACCGGCAG GCC CTGCCAGTC GGGGAAGAACTGCTG sqdB 1214658 - 1213444 - | UDP-sulfoquinovose synthase TERM 596 1214774 - 1214800 + r 72 -3.7 -4.57569 | gap 2, overlap 1214769 1214778 TTTTCACGACGCTCG GCAAGGCTGTGCC GAT GGCG-GGCCT-GC TTTTTCAGGCGCTGC pfpI 1215374 - 1214805 - | protease I RSP_2571 1215772 - 1216809 + | putative oxidoreductase protein TERM 597 1217590 - 1217604 + G 75 -5.6 -4.57569 | GGTCGAATCGATCTC GCGTGC GGT GCAGGC TTTTTCCCGCGATGG crpK 1216964 - 1217755 + | crpK, Fnr-type transcriptional regulator RSP_2573 1217909 - 1218667 + | hypothetical protein RSP_2574 1219282 - 1218791 - | hypothetical protein TERM 598 1219216 - 1219202 - G 75 -12.8 -3.63515 | GGTCAGGCCGAAGAA GGCCGC CGT GCGGCC GTTCCACAGATCCTC RSP_2575 1219513 - 1220103 + | glutathione-dependent formaldehyde-activating enzyme TERM 599 1220112 - 1220141 + F 95 -17.1 -3.79906 | GGCCTGAGGGCTGCG GCCGCTCCCTCCC GCGA GGCGGGGAGCGGC TTCTTCTGAACGTGC adhI 1220336 - 1221466 + | alcohol dehydrogenase class III cycI 1221596 - 1222030 + | isocytochrome c2 xoxF 1222240 - 1224042 + | putative PQQ dehydrogenase protein TERM 600 1224152 - 1224181 + F 100 -18.5 -4.30719 | CCGGCATGATCTGAA GCCGCCCTTGCGG GCCC CCGCCGGGGCGGC TTTCTTCTGGGAGGA cycB 1224206 - 1224736 + | cytochrome c553i xoxJ 1224724 - 1225548 + | putative methanol oxidation protein RSP_2581 1225545 - 1226072 + | rhodanese RSP_2582 1226181 - 1227290 + | hypothetical protein RSP_2583 1227335 - 1228273 + | hypothetical protein RSP_2584 1228300 - 1228743 + | hypothetical protein RSP_2585 1228759 - 1229007 + | hypothetical protein TERM 601 1229068 - 1229108 + G 73 -14.8 -3.17219 | gap 2, overlap 1229068 1229101 GCTTCGGCGCGGTCC GG-GCCCTCCGGGA-GGTGA GCT TCACCGTCCCGCGGGGCGCC TTCGTGGCCCTTCTC TERM 602 1229220 - 1229259 + G 100 -25.8 -3.01712 | gap 1 GCGGGCTTCGATGCC CGCCG-CCAGCCGGGCGAG GCG CTCGCCCGGCTGGGCGTCG TGTTCCAGAGCCGGG TERM 603 1229447 - 1229399 - g 83 -16.6 -3.28924 | gap 1, opp_overlap 1229423 1229423 CAGCCTGTCCGACAA GGCCCATGCGCGGGTGGCGACCC TCTC GGGCGGCCAGCAGCGC-CGGGCC GAGATCGCACGCGCG RSP_2586 1229004 - 1229732 + | ABC multidrug efflux transporter, ATPase subunit RSP_2587 1229729 - 1230589 + | ABC multidrug efflux transporter, inner membrane subunit RSP_2588 1230599 - 1231192 + | hypothetical protein TERM 604 1231220 - 1231246 + T 77 -11.5 -3.85698 | TCGATGCGACGCGCC CCGTGCTGCAC GCTGG GTGCTGCGCGG TTTCTCCCCCGCGCG RSP_2589 1232431 - 1231337 - | hypothetical protein TERM 605 1232261 - 1232274 + g 74 -9.5 -4.08767 | AAGCCAGTCCGCCGC CCGCG CCTC CGCGG TTTTCCGGCAGTCGG RSP_2590 1232486 - 1233292 + | hypothetical protein flhR 1233459 - 1234166 + | two component LuxR family transcriptional regulator RSP_2592 1234177 - 1235337 + | hypothetical protein flhS 1235327 - 1236760 + | hybrid histidine kinase RSP_2594 1236765 - 1237379 + | hypothetical protein TERM 606 1237541 - 1237521 - g 72 -16.1 -2.78384 | CGGCCCCCCAGCACA CGGGCGAGG CAG CCCCGCCCG GCGCGGCGCGGGGGC RSP_2595 1237376 - 1237879 + | hypothetical protein RSP_2596 1238759 - 1237977 - | ABC transporter, ATPase subunit RSP_2597 1239736 - 1238756 - | ABC transporter, periplasmic substrate-binding protein RSP_2598 1240556 - 1239756 - | ABC transporter, inner membrane subunit TERM 607 1239877 - 1239865 - G 71 -9.1 -4.03141 | ACGATCACGAAATAA TCCGC CAT GCGGA ACGTGTTGCCATAGA phoB 1241362 - 1240670 - | phosphate regulon transcriptional regulator, PhoR phoU 1242087 - 1241362 - | phosphate uptake regulator, PhoU pstB 1242895 - 1242098 - | ABC phosphate transporter, ATPase subunit PstB pstA 1244255 - 1242906 - | ABC phosphate transporter, inner membrane subunit PstA pstC 1245697 - 1244252 - | ABC phosphate transporter, inner membrane subunit PstC TERM 608 1244678 - 1244660 - G 70 -13.2 -3.29947 | overlap 1244656 CAGGGACGAGATGAA GGGGATCA GCA TGATCCCC ATCACGAGGCCTGCC TERM 609 1245746 - 1245721 - R 86 -21.9 -2.78712 | overlap 1245718 CGGTCAAGGGAAGGA GGCGGCGCGAG GAGC CTCGCGCCGCC GGGGGAGGGTCAGTT pstS 1246799 - 1245756 - | ABC phosphate transporter, periplasmic phosphate-binding protein RSP_2605 1247864 - 1247175 - | hypothetical protein RSP_2606 1248258 - 1247875 - | ArsR family transcriptional regulator RSP_2607 1248795 - 1248295 - | nitrilotriacetate monooxygenase component B TERM 610 1248854 - 1248884 + H 71 -10.3 -3.7108 | overlap 1248851 AGCTGGTCTCGTTCC GCCTGCGCGACCG GAAGG CGCTCGGGCGGGC TTTCCGTCTCACGAT corA 1249031 - 1250026 + | Mg2+/Co2+ transporter dcd 1251246 - 1250170 - | 2'-deoxycytidine 5'-triphosphate deaminase TERM 611 1251311 - 1251274 - R 100 -22.9 -3.29829 | opp_overlap 1251275 1251279 1251282, overlap 1251275 1251279 1251282 GACAGGCTTTCAGAA GCAAAGAAGCCCGCCTC GACA GAGGCGGGCTTCTTTGT TGGTCGGGCCGGCGA TERM 612 1251310 - 1251275 - R 95 -26.4 -2.57683 | opp_overlap 1251275 1251279 1251282, overlap 1251274 1251279 1251282 ACAGGCTTTCAGAAG CAAAGAAGCCCGCCTC GACA GAGGCGGGCTTCTTTG TTGGTCGGGCCGGCG TERM 613 1251275 - 1251310 + r 100 -26.4 -3.14132 | opp_overlap 1251274 1251275 1251279 1251282, overlap 1251279 1251282 ACAGGCTTTCAGAAG CAAAGAAGCCCGCCTC GACA GAGGCGGGCTTCTTTG TTGGTCGGGCCGGCG TERM 614 1251306 - 1251279 - R 100 -21.4 -3.9941 | opp_overlap 1251279 1251275 1251282, overlap 1251275 1251274 1251282 GCTTTCAGAAGCAAA GAAGCCCGCCTC GACA GAGGCGGGCTTC TTTGTTGGTCGGGCC TERM 615 1251279 - 1251306 + r 100 -21.4 -4.24342 | opp_overlap 1251275 1251274 1251279 1251282, overlap 1251275 1251282 GCTTTCAGAAGCAAA GAAGCCCGCCTC GACA GAGGCGGGCTTC TTTGTTGGTCGGGCC TERM 616 1251303 - 1251282 - R 100 -17.3 -4.12296 | opp_overlap 1251279 1251275 1251282, overlap 1251279 1251275 1251274 TTCAGAAGCAAAGAA GCCCGCCTC GACA GAGGCGGGC TTCTTTGTTGGTCGG TERM 617 1251282 - 1251303 + r 100 -17.3 -4.24413 | opp_overlap 1251282 1251279 1251275 1251274, overlap 1251279 1251275 TTCAGAAGCAAAGAA GCCCGCCTC GACA GAGGCGGGC TTCTTTGTTGGTCGG RSP_2610 1252315 - 1251470 - | MerR family transcriptional regulator TERM 618 1252279 - 1252300 + g 76 -3.7 -4.66163 | gap 1 CGGCGACCTCGCTGA TCGTGCGGAA GGC TTCAGC-CGA TTTTTCCATCCGCAT ihfA 1252624 - 1252322 - | histone-like DNA-binding protein (IHF) fabH 1253686 - 1252715 - | 3-oxoacyl-[acyl-carrier-protein] synthase III plsX 1254805 - 1253693 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 1255037 - 1254831 - | 50S ribosomal protein L32 TERM 619 1255057 - 1255073 + r 76 -7.9 -4.27584 | overlap 1255059 CAACCTCGTGTTACG GAGGGGC CAG GCCCCTG TTTTGCCTTGGGGAT TERM 620 1255059 - 1255071 + r 71 -10.5 -3.7398 | overlap 1255057 ACCTCGTGTTACGGA GGGGC CAG GCCCC TGTTTTGCCTTGGGG RSP_2615 1255808 - 1255215 - | hypothetical protein RSP_2616 1256030 - 1256527 + | hypothetical protein RSP_2617 1257024 - 1256620 - | peptide methionine sulfoxide reductase RSP_2618 1257131 - 1257883 + | ornithine-acyl[acyl carrier protein] N-acyltransferase trmU 1259029 - 1257890 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase RSP_2620 1259153 - 1259431 + | hypothetical protein ctrA 1259527 - 1260240 + | two component transcriptional regulator ligA 1260334 - 1262448 + | DNA ligase recG 1262445 - 1264532 + | heme peroxidase RSP_2624 1264784 - 1264906 + | hypothetical protein TERM 621 1264984 - 1265013 + T 95 -13.5 -4.2558 | overlap 1264985 AGGACCGGACGCCAC TGCCGCCGCCC CTTGCCCC GGGCGGCGGCC TTTTCATGCGGGCTG TERM 622 1264985 - 1265012 + T 85 -17 -3.15027 | overlap 1264984 GGACCGGACGCCACT GCCGCCGCCC CTTGCCCC GGGCGGCGGC CTTTTCATGCGGGCT nifU 1265497 - 1265057 - | NifU-related protein involved in Fe-S cluster formation hisI 1265563 - 1265922 + | phosphoribosyl-AMP cyclohydrolase gltX/glnS 1266949 - 1266116 - | glutamyl-/ glutaminyl-tRNA synthetase gid 1268268 - 1266934 - | tRNA (uracil-5-)-methyltransferase Gid gyrA 1270995 - 1268272 - | DNA gyrase subunit A TERM 623 1269779 - 1269807 + g 79 -18.1 -2.78384 | GTCATCAGCCGCTCG CGCGCCTCGGCCG GAT CGGCCGAGCTGCG TATCGTGGCCACCAC TERM 624 1270151 - 1270169 + g 73 -14.6 -3.25896 | overlap 1270149 CCCTCGATCTTCTTC TCGCGGAC CAT GTCCGCGA TCTTCTCGATCATCG TERM 625 1270967 - 1270994 + g 87 -12 -4.2704 | gap 1, opp_overlap 1270936 TCGGCGATGGAGACC TGCGGCAGTCCGC TCA GCGGTCTGCC-CA TTTCTTCATCATCGC RSP_2631 1271238 - 1271501 + | USG protein argI 1272541 - 1271615 - | arginase ccmF 1273029 - 1274999 + | cytochrome c maturation protein, CcmF ccmH 1274996 - 1275451 + | cytochrome c maturation protein, CcmH TERM 626 1276284 - 1276260 - T 79 -11.4 -4.07568 | GGCCTTCCTCGAAAA GCGCCCCG CCACCTTCT CGGGGCGC TGACGCAAAAGCCCG TERM 627 1276318 - 1276295 - T 100 -17.4 -4.18018 | opp_overlap 1276294 GGCGCTGACGCAAAA GCCCGGCGCA CTCC CGCGCCGGGC CTCGTTCCCACCGGC ilvH 1276899 - 1276339 - | acetolactate synthase 3 regulatory subunit RSP_2637 1278748 - 1276982 - | acetolactate synthase 3 catalytic subunit TERM 628 1278809 - 1278787 - R 100 -11.9 -5.06414 | TCCGCGCAACAAAAA GCCCCCGGG GTTCA CTCGGGGGC GCATGGGAACCGATT RSP_2638 1279960 - 1279043 - | putative sodium/calcium exchanger TERM 629 1279936 - 1279924 - G 85 -9.1 -4.63218 | CGCCTCCGAAGAAAA GGCCT AGA AGGCC CGCGACAAACAGGAT RSP_2639 1281292 - 1280450 - | arginyl-tRNA-protein transferase RSP_2640 1281851 - 1281399 - | hypothetical protein TERM 630 1281872 - 1281894 + r 72 -14.8 -2.88663 | overlap 1281874 GTTCCTCTGTGGCGG GAAGCGGCCC CGG GGGCCGCCTC TATGTCGGAGTGCCT RSP_2641 1282571 - 1282161 - | hypothetical protein TERM 631 1282811 - 1282855 + r 91 -8.3 -5.00616 | CGCGAGAGCCTCGCG GCGCCGTTCCGGGCGCACCCC GCA GCGGCGCCGTCGGAATGGGGC TTTTTTCCGGAGCAG RSP_2642 1283480 - 1283010 - | hypothetical protein glnE 1283622 - 1286471 + | glutamate-ammonia-ligase adenylyltransferase RSP_2644 1286458 - 1286727 + | hypothetical protein TERM 632 1286928 - 1286906 - T 79 -14.8 -3.29511 | opp_overlap 1286905 1286917 GGCAGGCGCGCAGAA GAGCGCGCCG TGC CGCCGCGCTC CTCCTTCAGCGCAGG eda 1287572 - 1286934 - | 2-keto-3-deoxy-phosphogluconate aldolase TERM 633 1287158 - 1287100 - G 85 -15.1 -3.85698 | gap 1, overlap 1287104 CCCGTGGGGCAGAAA GTCACCTGGGGCAGCGGCCCGCCCAGCG CCTT CAC-GGCCGGGGCGCCGCCCGAGGTCTC GGCAGGGAAGAACTT TERM 634 1287154 - 1287104 - G 84 -18.9 -2.70354 | gap 1, overlap 1287100 TGGGGCAGAAAGTCA CCTGGGGCAGCGGCCCGCCCAGCG CCTT CAC-GGCCGGGGCGCCGCCCGAGG TCTCGGCAGGGAAGA TERM 635 1287669 - 1287710 + H 82 -13.6 -3.70902 | gap 1, opp_overlap 1287658 1287656 GAGAGGGGGAGAGGG GCGCCCCGCCTCGGGCGGC ATGGA GCCGGG-GAAGCGGGGCGC TTTCACTCTGGGCGG TERM 636 1290190 - 1290169 - H 78 -13 -3.68351 | opp_overlap 1290169 GTCGCAGCATGGAAA GGGCTCCG CCGCGT CGGAGCCC TTTTTCTTTGGGGCC TERM 637 1290169 - 1290190 + H 100 -13 -5.27335 | opp_overlap 1290169 GTCGCAGCATGGAAA GGGCTCCG CCGCGT CGGAGCCC TTTTTCTTTGGGGCC RSP_2647 1290283 - 1291473 + | SAM-dependent methyltransferase TERM 638 1291536 - 1291560 + G 72 -15.7 -2.78384 | overlap 1291505 ATCCTTCTGGGTTGC GCGGCGCGAGG GCT CTTCGTGCCGC TCTGGTCCGAGCGGA RSP_2648 1291470 - 1292012 + | hypothetical protein RSP_2649 1292749 - 1292063 - | putative Zn-dependent protease RSP_2650 1293996 - 1292812 - | hypothetical protein RSP_6205 1294183 - 1294019 - | hypothetical protein RSP_2651 1295583 - 1294180 - | hypothetical protein TERM 639 1295178 - 1295153 - G 75 -11.1 -3.9941 | overlap 1295156 CGCGGCACAACGAAA CAGGCGGCGGT GGGC ACCAGCGCCTG CATCCGCCGCCGCTC RSP_2652 1296032 - 1295580 - | putative acetyltransferase TERM 640 1296089 - 1296054 - R 91 -14.7 -3.89346 | CCCGGATTGGAGAAA GGCGAGG-GGCGCGGGC CTCA GCCCG-GCCGCCGCGCC ATGAAGGCCAGACGC RSP_2653 1296910 - 1296071 - | AAA family ATPase RSP_2654 1297043 - 1297519 + | DnaK suppressor protein TERM 641 1297598 - 1297568 - f 91 -12.5 -4.56597 | overlap 1297572 GCCCGGGCGCAAAAA CTGACGCCGGACC CGTTC GGTCCGGCGTTCG CATGTGGAGGAACCC TERM 642 1297594 - 1297572 - f 75 -16.3 -2.83903 | overlap 1297568 GGGCGCAAAAACTGA CGCCGGACC CGTTC GGTCCGGCG TTCGCATGTGGAGGA nahG 1297615 - 1298790 + | putative salicylate hydroxylase (salicylate 1-monooxygenase) RSP_2655 1299185 - 1298787 - | hypothetical protein xthA 1300107 - 1299328 - | exodeoxyribonuclease III RSP_2658 1300510 - 1300184 - | HesB/YadR/YfhF family protein dgt 1300585 - 1301721 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 643 1301766 - 1301748 - g 71 -16 -2.62184 | CCCCTGTGGAGACGA GGTCCGCG CGG CGCGGACC TCGGGCCCGCGGGCG RSP_2660 1301738 - 1302859 + | ribonuclease BN family protein RSP_2661 1304007 - 1302865 - | Iron-containing alcohol dehydrogenase glpK 1305485 - 1304004 - | glycerol kinase TERM 644 1305754 - 1305799 + r 90 -13.4 -4.0825 | gap 3 ACCTTGCAGCCGTAA CTTCGCCGCGCTGCGCCTGGCCG GCA CGGCC-GG-GCAG-GTGGAGAAG TTCTTTCCTTGCGGA TERM 645 1305843 - 1305866 + r 77 -10.9 -3.83205 | overlap 1305844 GTCGCCGCGGGCGGG TGGGGGCGG GCGGAG CCGCCCCCC TTTCGTGTCAGCCCT RSP_2663 1307598 - 1305874 - | ABC sugar (glycerol) transporter, periplasmic binding protein RSP_2664 1307932 - 1307660 - | hypothetical protein RSP_2665 1308737 - 1307934 - | ABC sugar (glycerol) transporter, inner membrane subunit RSP_2666 1309647 - 1308775 - | ABC sugar (glycerol) transporter, inner membrane subunit RSP_2667 1310732 - 1309647 - | ABC sugar (glycerol) transporter, ATPase subunit RSP_2669 1311831 - 1310743 - | ABC sugar (glycerol) transporter, ATPase subunit TERM 646 1311919 - 1311939 + r 81 -9.6 -4.26351 | overlap 1311920 CCCGTCCGGTTTCCC TGCCGGGC TGTGC GCCCGGCC TTTGTTCGCTTCCTC glpD 1313580 - 1311961 - | glycerol-3-phosphate dehydrogenase TERM 647 1314020 - 1313987 - R 80 -15.9 -3.15544 | GTGCAGGGGCACGAA CGGGAACGGCCGCCC CACA GGGCGGCCGTCTGCG GAGCGGGAAGATCCG RSP_2671 1314316 - 1314041 - | hypothetical protein RSP_2672 1314483 - 1314842 + | hypothetical protein TERM 648 1314902 - 1314869 - T 100 -21.9 -3.44051 | gap 1, overlap 1314875 GCTGCAGGACGACAA GCGAAAGGCCGGCAGA TCC TCTGCCGGCCTT-CGC CATGATGGAGACGAG TERM 649 1314897 - 1314875 - T 100 -19.2 -3.82083 | overlap 1314869 GGACGACAAGCGAAA GGCCGGCAGA TCC TCTGCCGGCC TTCGCCATGATGGAG RSP_2673 1317282 - 1314937 - | quinoprotein glucose dehydrogenase TERM 650 1317463 - 1317440 - R 100 -19.6 -4.19735 | TTCCCCAAAAGGAAA TGGCGCGCGG TTTC CCGCGCGCCA TCCGTCACCCTAGGG RSP_2674 1317832 - 1317485 - | hypothetical protein TERM 651 1318443 - 1318420 - R 100 -21 -5.2189 | CGAAGGATGAAAAAA GCGGCGCGCC CGGA GGCGCGCCGC TCAAGCCCTGCGCAA RSP_2675 1319263 - 1318469 - | hypothetical protein RSP_2676 1320297 - 1319386 - | hypothetical protein TERM 652 1321297 - 1321250 - R 100 -13.3 -5.0538 | CCTCACCTGAAAAAA TCCACCGGCGTGGCGCGTGCC TGATGC GGTAGGCGCGACGCGGGCGGA AGACGTCAGCCTTGC RSP_6064 1321683 - 1321303 - | response regulator receiver domain-containing protein RSP_2677 1321994 - 1322746 + | Mg2+ transporter RSP_2678 1323188 - 1322934 - | hypothetical protein RSP_2679 1325791 - 1323185 - | ATP-dependent DNA ligase RSP_6225 1326777 - 1326562 - | hypothetical protein TERM 653 1327363 - 1327307 - g 70 -14.4 -3.20382 | overlap 1327309 GGCGAGAGCTATGAA GAGGCCG-CCCGGATCTGCGACTGTGCC ATC GGCACGGT-GAAGAGCCGGGTCAGCCGC GCGCGACAGCTGGTG TERM 654 1327361 - 1327309 - g 76 -15.6 -3.16492 | overlap 1327307 CGAGAGCTATGAAGA GGCCG-CCCGGATCTGCGACTGTGCC ATC GGCACGGT-GAAGAGCCGGGTCAGCC GCGCGCGACAGCTGG rpoE 1326905 - 1327411 + | sigma factor, RpoE fabD 1327641 - 1328573 + | [Acyl-carrier-protein] S-malonyltransferase RSP_2683 1329034 - 1328804 - | hypothetical protein RSP_2684 1329513 - 1329031 - | putative endonuclease involved in recombination RSP_2685 1330763 - 1329510 - | putative cytochrome c-type biogenesis protein, cycH TERM 655 1331922 - 1331865 - g 72 -11.4 -3.64487 | gap 3 CGACAGTTTCAACAA CTTCACCCAGCGCG-GCAGCTTC-CATCA TAT CGAGGAGACGCTGCGCGCGCTGG-TGGAG ACCTTCCCGATCATC RSP_2686 1330960 - 1332207 + | putative sarcosine oxidase beta subunit fbcQ 1332287 - 1332661 + | cytochrome b-c1 subunit IV soxD 1332701 - 1333024 + | putative sarcosine oxidase delta subunit protein soxA 1333021 - 1336002 + | putative sarcosine oxidase, alpha subunit RSP_2690 1335995 - 1336552 + | putative sarcosine oxidase gamma subunit TERM 656 1336604 - 1336577 - T 82 -17 -3.07816 | opp_overlap 1336578 CGGCTATCCAGTCAA TGGCCAGAGGCG CGAT CGCCTCTGGCCT TTCCTTTGCAGGCCT TERM 657 1336578 - 1336603 + T 100 -20.5 -4.05788 | opp_overlap 1336577 GGCTATCCAGTCAAT GGCCAGAGGCG CGAT CGCCTCTGGCC TTTCCTTTGCAGGCC RSP_2692 1338508 - 1336565 - | acyltransferase domain-containing protein RSP_2693 1338764 - 1339363 + | Fe/Mn family superoxide dismutase TERM 658 1339372 - 1339396 + T 93 -19.3 -3.48395 | CCTCTGACATGGCTG GCGGAGTGCCC TCC GGGCGCTCCGC TTCTCTGCCCGGAGT RSP_2694 1340070 - 1339516 - | hypothetical protein TERM 659 1339616 - 1339577 - G 71 -15.1 -3.05384 | overlap 1339580 GGTGCGGCGACGTAA TAATCGCGCAGGGCCCC TTCGGC GAAGCCCTGCGCAATCA CCGCCTCCATCAGCG TERM 660 1339613 - 1339580 - G 82 -14.6 -3.67597 | overlap 1339577 GCGGCGACGTAATAA TCGCGCAGGGCCCC TTCGGC GAAGCCCTGCGCAA TCACCGCCTCCATCA RSP_2695 1340171 - 1341493 + | peptidoglycan-binding protein RSP_2696 1341579 - 1343417 + | ABC transporter, fused ATPase and inner membrane subunits RSP_2697 1343517 - 1344164 + | hypothetical protein RSP_2698 1344210 - 1345556 + | putative quinoprotein TERM 661 1345993 - 1345947 - g 72 -12.1 -3.61398 | overlap 1345975 CCTGCGCCGGAAGAA CGCCCATGTGATCCTCGGCGT GAACA AGGCCGAGGGCCGCGCGGGCG ACGGCGGCGCCATCG engA 1345615 - 1347078 + | GTP-binding protein EngA TERM 662 1347081 - 1347098 + T 100 -14.1 -4.41047 | overlap 1347095 CAAGAAGGACTGACA GGGCGCC GCGA GGCGCCC TTTTCCTTGGGCGCT RSP_2700 1349299 - 1347320 - | ABC oligo/dipeptide transporter, fused ATPase subunits RSP_2701 1350446 - 1349292 - | ABC oligo/dipeptide transporter, inner membrane subunit TERM 663 1350060 - 1350015 - G 79 -13.1 -3.85698 | gap 1, overlap 1350016 CCGTCCGCCGACAAA GC-CCGCAGGCAGGCCGAGGAG CAT CCCCACGGCCAGCGCGCAGAGC GTGGCGGCGGGGGCG RSP_2702 1351471 - 1350446 - | ABC oligo/dipeptide transporter, inner membrane subunit TERM 664 1351182 - 1351126 - G 78 -18.6 -2.65264 | CCATGACCCAGAGCA TGAGCCAGCCGGTCGCGGCGAGGCTG CGGGC CAGCACCTCTGCGACCGGCTGGCGGA AGACGGTGGACTGGC RSP_2703 1352980 - 1351475 - | ABC dipeptide transporter, periplasmic binding protein TERM 665 1353310 - 1353254 - R 70 -12.9 -3.31263 | opp_overlap 1353306, overlap 1353256 AGTCGATGCCGAGAA CAGGCCTGTGTCCCGC-CTCCGGTCGG CGATC CCG-CCAGAGCGCGGGGCTCAGGGCAG GCGGATCTCGTGCCA TERM 666 1353308 - 1353256 - R 72 -14.1 -3.22475 | opp_overlap 1353306, overlap 1353254 TCGATGCCGAGAACA GGCCTGTGTCCCGC-CTCCGGTCGG CGATC CCG-CCAGAGCGCGGGGCTCAGGGC AGGCGGATCTCGTGC miaA 1354246 - 1353302 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 667 1353876 - 1353858 - G 72 -3 -4.58395 | overlap 1353860 1353862 GTCAGGGCGGAAAAA TAGAGGCC CGT GCCCCCCA CGATGACCGGGCGCA TERM 668 1354254 - 1354277 + H 82 -11.7 -4.14013 | overlap 1354274 TCCGCCACCGGCGGC CGATCCCGG TTGAAC CCGGGGTCG TTTTCCGACATTTTG TERM 669 1354978 - 1355001 + G 76 -8.2 -4.19817 | opp_overlap 1354983 ATCGCGCTCGCCCGC GACAATGATC TGCC GATCATCGTC TTTTCGCTCGATGAG pyrH 1354336 - 1355076 + | uridylate kinase frr 1355162 - 1355728 + | ribosome recycling factor uppS 1355798 - 1356541 + | undecaprenyl pyrophosphate synthetase cdsA 1356538 - 1357359 + | phosphatidate cytidylyltransferase dxr 1357368 - 1358552 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase RSP_2710 1358559 - 1359893 + | putative membrane-associated zinc metalloprotease RSP_6065 1360060 - 1360197 + | hypothetical protein TERM 670 1360284 - 1360258 - f 72 -6.4 -4.36914 | overlap 1360259 GCGCTTTTGACAAAA CCCGCCATGTCC AGT AGTCAGGGCGGA AAGAAAATGACCGAG RSP_2711 1360291 - 1362690 + | putative outer membrane protein RSP_6204 1362690 - 1363382 + | hypothetical protein fabZ 1363468 - 1363935 + | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase lpxA 1363966 - 1364721 + | UDP-N-acetylglucosamine acyltransferase RSP_2715 1364718 - 1365539 + | hypothetical protein lpxB 1365536 - 1366675 + | lipid-A-disaccharide synthase RSP_2717 1366799 - 1368622 + | putative UUP ATPase RSP_2718 1368835 - 1369437 + | outer membrane protein TERM 671 1369463 - 1369484 + F 100 -17.3 -4.70659 | opp_overlap 1369463 CCTGACCACAGGAAA GGGCGCGGA GCGA TCCGCGCCC TTTTTCCATGTCCGC TERM 672 1369484 - 1369463 - f 100 -17.3 -3.86202 | opp_overlap 1369463 CCTGACCACAGGAAA GGGCGCGGA GCGA TCCGCGCCC TTTTTCCATGTCCGC RSP_2719 1369671 - 1370120 + | AsnC family transcriptional regulator TERM 673 1370647 - 1370663 + G 74 -9.3 -4.11484 | overlap 1370648 GATGCCTGCTATGCC GCCGCGG CTG CCGCGGG TTTTGCGGCCTTCGC TERM 674 1370769 - 1370806 + G 100 -19.2 -3.73224 | gap 2, overlap 1370775 GCTGAGGCCCGAGCC GCCCGCGGCGGCGGCGGC GGCG GCTGC-GCC-CCGCGGGC TTTGGTCGACGCTGG RSP_2720 1370494 - 1371102 + | LysE/RhtB family amino acid efflux pump RSP_2721 1371437 - 1371099 - | hypothetical protein cysS 1371654 - 1373153 + | cysteinyl-tRNA synthetase TERM 675 1374484 - 1374502 + G 72 -11.7 -3.63515 | GGTGGCGCGGCGAGA GCTGGGC CTCCT GCCCAGC TTCTTCGAGGTGAAG RSP_2723 1373279 - 1374931 + | alpha-isopropylmalate/homocitrate synthase family transferase RSP_2724 1374928 - 1375647 + | methylase involved in ubiquinone/menaquinone biosynthesis TERM 676 1375701 - 1375746 + G 84 -19.6 -2.94912 | CCGGACCGTCATGCG GCGGCGATGGCCGCGCCCCC TGCGGC GCGGGCGCGGCTCTGGCCGC TCTATGCCTTCAACC RSP_2725 1375644 - 1376411 + | phytoene/squalene synthetase RSP_2726 1377635 - 1376415 - | major facilitator superfamily multidrug transporter TERM 677 1376751 - 1376710 - G 71 -8.6 -4.15222 | gap 2, overlap 1376711 AGTGCGCCGAAGAAA TGGC-CGAGCTCGA-CGCCC GACA GGGCGACCGCGCCCGAGCCT GCGAGGATGGCGAGG RSP_2727 1377774 - 1378403 + | 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase RSP_2728 1378400 - 1379062 + | phospholipase/carboxylesterase TERM 678 1379139 - 1379094 - f 70 -15.4 -2.70932 | gap 2, overlap 1379120 GCGCTGTCCGAAGCA CGGCCCGCGGCGCTGCTGCCGG AAGA CCCGCAGCCG-GCCGCAGG-CG CCGGATCTACGCTTC TERM 679 1379845 - 1379873 + G 70 -9.5 -3.73042 | opp_overlap 1379850, overlap 1379843 1379846 1379850 GAATTCGTCTCTCCC CAGAAGCGCGTGG CCT TCACGCGCTTCAA TCTTTTCCTGAGGGA TERM 680 1379850 - 1379868 + G 70 -12.4 -3.29856 | opp_overlap 1379850, overlap 1379846 1379845 1379843 CGTCTCTCCCCAGAA GCGCGTGG CCT TCACGCGC TTCAATCTTTTCCTG RSP_2729 1379593 - 1380177 + | restriction endonuclease RSP_2730 1380472 - 1380798 + | ArsR family transcriptional regulator ArsH 1381081 - 1381794 + | arsenical resistance protein, ArsH RSP_2732 1381791 - 1382954 + | major facilitator transporter zwf 1383171 - 1384622 + | glucose-6-phosphate 1-dehydrogenase pgl 1384661 - 1385332 + | 6-phosphogluconolactonase pgi 1385352 - 1386953 + | glucose-6-phosphate isomerase TERM 681 1387129 - 1387149 + T 78 -13.9 -3.61398 | opp_overlap 1387121 1387120 1387118, overlap 1387130 CAAATATCCCGGGGG TCCGGGGGC AGC GCCCCCGGC TTCTTCGCGGCCGGC TERM 682 1387130 - 1387148 + T 78 -17.4 -2.76696 | opp_overlap 1387121 1387120 1387118, overlap 1387129 AAATATCCCGGGGGT CCGGGGGC AGC GCCCCCGG CTTCTTCGCGGCCGG RSP_2737 1387527 - 1387180 - | putative ssRNA endoribonuclease L-PSP RSP_2738 1387846 - 1388793 + | rhodanese-related sulfurtransferase RSP_2739 1388804 - 1389931 + | hypothetical protein TERM 683 1390037 - 1390073 + G 90 -16.6 -3.61398 | gap 1 AGGCGCCGCCGCTTC TGGCGCTCGGCTCGGGG CTCG CCCCGGGCGGAGC-CCA TTGTTCCGCCGCCGG RSP_6066 1389928 - 1390095 + | hypothetical protein TERM 684 1390131 - 1390162 + F 75 -10 -4.07568 | opp_overlap 1390137, overlap 1390133 CGTGCTGCCGCCCGA CAGAAACGGCGCCC TCCG GGGCGCCGTTCGCG TTTTCGGCACCCCCC TERM 685 1390156 - 1390137 - f 100 -16.4 -4.03234 | opp_overlap 1390133 1390131 GCCGCCCGACAGAAA CGGCGCCC TCCG GGGCGCCG TTCGCGTTTTCGGCA RSP_2740 1390370 - 1391626 + | putative glucose/sorbosone dehydrogenase RSP_2741 1391623 - 1392219 + | class I diheme cytochrome c4 RSP_6067 1392574 - 1392245 - | hypothetical protein TERM 686 1393108 - 1393165 + G 73 -14.1 -3.28924 | gap 1, opp_overlap 1393156, overlap 1393110 CTTCAGGGCGGTGAA GGTCACG-GCCCTTCCGGGCGGCCCG CGGAGGA CGGGCCGCAAGGAAGAGCTCGTGATG TTCTCGGGCGGCGTC TERM 687 1393110 - 1393163 + G 86 -18.9 -3.21276 | gap 1, opp_overlap 1393156, overlap 1393108 TCAGGGCGGTGAAGG TCACG-GCCCTTCCGGGCGGCCCG CGGAGGA CGGGCCGCAAGGAAGAGCTCGTGA TGTTCTCGGGCGGCG RSP_2742 1392722 - 1393936 + | hypothetical protein RSP_2744 1394737 - 1393970 - | hypothetical protein TERM 688 1395496 - 1395474 - g 70 -14.1 -3.21276 | opp_overlap 1395488, overlap 1395472 GGCCGGGCTACAAGA CCGCGCAGC AGGCG GCCGCGCGG CTGACGGGCCGGACG RSP_2745 1394903 - 1395871 + | hypothetical protein RSP_2746 1396806 - 1395862 - | hypothetical protein RSP_2747 1398246 - 1396918 - | glycosyltransferase RSP_2748 1398876 - 1398481 - | CopG family transcriptional regulator TERM 689 1399165 - 1399135 - H 79 -7.4 -4.49556 | overlap 1399136 CGCCGATGAAACAAA CCCGGCCCCGGC CTCATTC GCCGAGGGCGGC AAGCACCTGTAGCAA TERM 690 1399748 - 1399721 - g 76 -16.3 -3.21258 | gap 1 AGGAACGCAAGGCAA CGC-GCGCCGCC CTGGC GGCGGCGCAGCG GCGCTCCCTGACCTT RSP_2749 1399432 - 1400751 + | P4 family integrase RSP_2750 1401018 - 1401476 + | hypothetical protein TERM 691 1401866 - 1401847 - g 71 -8.6 -4.12188 | opp_overlap 1401847, overlap 1401852 TGATGACGGGGAAAA CAGTATCG TGGA CGATACCG TTTCTGACGAAAACA TERM 692 1401922 - 1401880 - g 95 -15.1 -4.25104 | overlap 1401852 1401882 CGTTTCTGACGAAAA CAGTATCGTGGAGGATACT CGAAC AGTATCGTCCACGATACCA GAACCGCTAGAGGAA TERM 693 1401920 - 1401882 - g 93 -17.7 -3.73042 | overlap 1401852 1401880 TTTCTGACGAAAACA GTATCGTGGAGGATACT CGAAC AGTATCGTCCACGATAC CAGAACCGCTAGAGG RSP_2751 1401473 - 1402648 + | hypothetical protein RSP_2753 1402642 - 1403139 + | hypothetical protein RSP_6068 1403136 - 1403489 + | hypothetical protein RSP_2754 1403476 - 1404069 + | hypothetical protein TERM 694 1404503 - 1404476 - g 75 -17 -2.62983 | TCGACGCCGAGATCA GCGCCACCAGCC GCGA GGCTGGCGACGC GCGCGCCACCTACCG RSP_2755 1404223 - 1404648 + | hypothetical protein RSP_2756 1404645 - 1405229 + | hypothetical protein TERM 695 1406197 - 1406236 + G 85 -19.2 -3.12351 | GGCTCAGATCCTCGG GGCCGAGGTGGCGGCGGA TCGT TTCGCCGCCGCAGCGGCC TTCGCTCTCGAGACG RSP_6069 1405775 - 1406557 + | hypothetical protein RSP_2757 1406572 - 1407225 + | hypothetical protein TERM 696 1407482 - 1407451 - g 73 -6.4 -4.39889 | gap 1, opp_overlap 1407477, overlap 1407453 AGAAGGACACGAAAA CGGCGAG-CCTGAGC CGG GCGCAGGACGCGCGG GCGGCGCTTCTGGCC RSP_2758 1407231 - 1407743 + | hypothetical protein RSP_2759 1407736 - 1408137 + | hypothetical protein RSP_2760 1408130 - 1408582 + | hypothetical protein RSP_2761 1408579 - 1408812 + | putative P2-like prophage tail protein X RSP_2762 1409863 - 1409510 - | hypothetical protein RSP_2763 1410065 - 1410313 + | hypothetical protein RSP_2764 1410310 - 1410615 + | hypothetical protein RSP_2765 1411144 - 1411416 + | hypothetical protein TERM 697 1412113 - 1412127 + F 83 -5.6 -4.91109 | overlap 1412115 TAGACCCTCAAGGCG TTCGGC ACC GCCGCA TTTTTCTCATCCAAG RSP_6070 1412708 - 1413001 + | hypothetical protein RSP_6242 1413761 - 1413396 - | hypothetical protein RSP_2766 1415862 - 1413841 - | hypothetical protein TERM 698 1415274 - 1415242 - G 72 -11.9 -3.61398 | opp_overlap 1415238 GGGGCCCTCGAAGAA GCCGGGCCAGAGATC GAG GATCCGCGGCGCGGC ATCGTGATTGCCGCG TERM 699 1415945 - 1415904 - R 75 -16.5 -2.91383 | AGGCTCAGGCAGATA TGCGACGGGGGAGCCGCTG GTGC CAGCCGCTCCCCCGCAGGA TGTCGCGCGGATGCG RSP_2768 1416971 - 1415997 - | methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase RSP_2769 1417939 - 1416968 - | 5,10-methylenetetrahydrofolate reductase RSP_2770 1418219 - 1417926 - | hypothetical protein RSP_2771 1418489 - 1419625 + | putative exopolyphosphatase ftsJ 1419622 - 1420356 + | 23S rRNA methylase TERM 700 1420399 - 1420379 - T 78 -12.5 -3.79113 | overlap 1420380 ACCGGGCCAGAAGAA TGGGCGCCT TGA AGGCGCCCG TCACCATACTCGGAG TERM 701 1420398 - 1420380 - T 75 -16 -2.87146 | overlap 1420379 CCGGGCCAGAAGAAT GGGCGCCT TGA AGGCGCCC GTCACCATACTCGGA TERM 702 1420478 - 1420460 - T 100 -13.8 -4.64861 | CCCGGCCAAAAGAAA GGGCGCCC CGG AGGCGCCC GTGATCCTGATCGGA RSP_2773 1421145 - 1420507 - | hypothetical protein TERM 703 1421106 - 1421123 + g 74 -4 -4.51743 | overlap 1421107 TCGCCTGGTCTTCTG TCCGCC TGTTCC GGCGGC TTTCTTTGCTACTCG RSP_2774 1421362 - 1423002 + | hypothetical protein lpxD 1423051 - 1424142 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase acpP 1424176 - 1424442 + | Acyl carrier protein, AcpP RSP_2777 1424454 - 1425662 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 704 1425712 - 1425678 - T 100 -19.3 -4.08767 | opp_overlap 1425684 TCGAGCGGCTGAAAA GCGAAACGCCGCCCG GGGTG CGGGCGGCGTCTCTC GGAGGCTTGCGGGAA TERM 705 1425684 - 1425706 + T 80 -17.7 -2.87881 | opp_overlap 1425678 GGCTGAAAAGCGAAA CGCCGCCCG GGGTG CGGGCGGCG TCTCTCGGAGGCTTG RSP_2778 1426398 - 1425730 - | hypothetical protein TERM 706 1426584 - 1426552 - R 100 -16.4 -4.07687 | gap 1, opp_overlap 1426559, overlap 1426553 1426559 AGGCGGCGCCGAAAA GC-GAAAAGGGCCGG CAAT CCGGCCCTTCTCAGC GTCAATTTTGCTCCC TERM 707 1426582 - 1426553 - R 78 -16.5 -3.04398 | opp_overlap 1426559, overlap 1426552 1426559 GGCGGCGCCGAAAAG CGAAAAGGGCCGG CAAT CCGGCCCTTCTCA GCGTCAATTTTGCTC TERM 708 1426559 - 1426576 + r 74 -14.1 -3.3164 | opp_overlap 1426559 1426553 1426552 GCCGAAAAGCGAAAA GGGCCGG CAAT CCGGCCC TTCTCAGCGTCAATT TERM 709 1426576 - 1426559 - R 100 -14.1 -4.4267 | opp_overlap 1426559, overlap 1426553 1426552 GCCGAAAAGCGAAAA GGGCCGG CAAT CCGGCCC TTCTCAGCGTCAATT TERM 710 1426726 - 1426703 - R 100 -18.2 -4.91573 | AAAAGACAGGAAAAA CCGCGCCTTC GAGA GAAGGCGCGG CCAGTCCAGTTCAGG TERM 711 1426892 - 1426865 - R 100 -22.8 -3.36273 | opp_overlap 1426878 1426891 TCGCCTGAAGACGAA CGGCCGGAGGGA TCGC TCCCTCCGGCCG CCGGGGCAGGGTGCC catA 1428399 - 1426933 - | catalase TERM 712 1428312 - 1428355 + g 75 -14.7 -3.30124 | overlap 1428319 TCAGCTGGTAATCCT CCAGCAGCAC-CGGACCGCGG GGAC CCGCGGTCAGCGTGTT-CTGG TTGTCGGCGATCGGC TERM 713 1428319 - 1428349 + g 72 -13.3 -3.56325 | gap 1, overlap 1428312 GTAATCCTCCAGCAG CAC-CGGACCGCGG GGAC CCGCGGTCAGCGTG TTCTGGTTGTCGGCG TERM 714 1429254 - 1429280 + G 70 -13 -3.28712 | gap 1 CGGCAGGAGCGGGCG GCGGCGC-CGG GGCTGG CCGTGCGCCGC TTCTCGACGCCCGAG oxyR 1428501 - 1429427 + | LysR family transcriptional regulator RSP_2781 1430004 - 1429456 - | peroxiredoxin/glutaredoxin family protein aqpZ 1430897 - 1430166 - | aquaporin z, major Intrinsic protein (MIP) family lipA 1431034 - 1431996 + | lipoyl synthase TERM 715 1432046 - 1432014 - T 85 -16.3 -3.59979 | opp_overlap 1432016, overlap 1432016 GCCTCCGATTCGAAA GACGCCGGCGGGA TGTCATG TCCCGCCGGCGTT TCTTCATGGGGCAGG TERM 716 1432044 - 1432016 - T 89 -18.9 -3.38046 | opp_overlap 1432016, overlap 1432014 CTCCGATTCGAAAGA CGCCGGCGGGA TGTCATG TCCCGCCGGCG TTTCTTCATGGGGCA TERM 717 1432016 - 1432044 + T 100 -20.3 -4.24342 | opp_overlap 1432014 1432016 CTCCGATTCGAAAGA CGCCGGCGGGATG TCA TGTCCCGCCGGCG TTTCTTCATGGGGCA cycG 1432959 - 1432069 - | diheme class I cytochrome c CycF 1433424 - 1432963 - | cytochrome c-554 HPRT 1434376 - 1433831 - | hypoxanthine phosphoribosyltransferase RSP_2787 1434468 - 1434920 + | hypothetical protein RSP_2788 1434945 - 1435232 + | hypothetical protein RSP_2865 1436742 - 1435363 - | putative transposase cbbE 1436969 - 1437679 + | ribulose-5-phosphate 3-epimerase TERM 718 1437684 - 1437713 + T 73 -16.5 -2.62184 | opp_overlap 1437680 1437676 CGGCAAAGTGAGATT TCAGGGTCTGCCG ACCG CGGCAGACCCTCA TGCTGTCCGGGAGGA RSP_2862 1438945 - 1437761 - | glycine/D-amino acid oxidase (deaminating) TERM 719 1439282 - 1439309 + r 82 -17 -2.98823 | opp_overlap 1439283 TCATGGCAAAGAAAA ACGGCGCGATCC CGGA GGATCGCGCCGC TCTGTCTGCGAGGAG TERM 720 1439308 - 1439283 - R 100 -20.5 -5.28942 | opp_overlap 1439282 CATGGCAAAGAAAAA CGGCGCGATCC CGGA GGATCGCGCCG CTCTGTCTGCGAGGA TERM 721 1439341 - 1439373 + r 81 -3.4 -4.93968 | gap 1 AAGGAATCAGCCCGC GAGGGTCTTGGCGAC CTCG GCCGCGAA-ATCCTC TTTTTCCTTCTCGAT tsf 1440228 - 1439332 - | elongation factor Ts TERM 722 1439559 - 1439584 + g 75 -13.3 -3.65812 | gap 1 TCTCGATCACCGCAT CG-GGCTTCGGC TTG GCCGAGGCCGCG TTCTCTTCCAGCGCC TERM 723 1440286 - 1440257 - R 71 -11.3 -3.61268 | overlap 1440259 CAGTGAATTGCCAAA GACCGGGCGGGGA GTTA CCCCCGTCCGGTA ACGGGATTGCGACGG TERM 724 1440284 - 1440259 - R 74 -13.9 -3.38314 | overlap 1440257 GTGAATTGCCAAAGA CCGGGCGGGGA GTTA CCCCCGTCCGG TAACGGGATTGCGAC rpsB 1441071 - 1440310 - | 30S ribosomal protein S2 TERM 725 1441926 - 1441895 - g 70 -14.4 -3.17075 | gap 1, opp_overlap 1441894 1441893 GGTGCTGCAACTCAA CCGCGCCG-AGGCCG CCA CGATCTGCGGCGCGG ACTTTCCCACCTCGC TERM 726 1441941 - 1441994 + G 74 -9.4 -4.07568 | gap 2 GACTTTCCCACCTCG CTCGCCCGCCGCCCCGAGGCCGCC TTGCCTTC GGCCGCC-CGGGGGGG-GGGCCCG TTTTGGGGGCGGCGG TERM 727 1442190 - 1442152 - g 87 -20.3 -3.01712 | gap 2, opp_overlap 1442179 1442180 TCTCGCGGCCGAACA TCGCGGCG-CC-GGGCGGG AGG CCCGCCCTGGCCGCCGCGC TCGCCGCCGCGGCAG RSP_6216 1441320 - 1442234 + | carbohydrate kinase PfkB family RSP_2858 1442231 - 1443142 + | IndA involved in pigment biosynthesis RSP_2857 1443966 - 1443169 - | D-beta-hydroxybutyrate dehydrogenase TERM 728 1444070 - 1444052 - H 100 -13.1 -5.77853 | opp_overlap 1444052 AAGCGCGAAAAAAAA CGCCGGC GCGAA GCCGGCG TTAAGTCGTTGAGGC TERM 729 1444346 - 1444363 + G 74 -2.5 -4.64844 | overlap 1444347 AGCTATGTATGGCGA ACCGGCG CTTC CACCGGA TTTTGTGTCTCTGCC TERM 730 1445355 - 1445381 + G 81 -15.8 -3.54129 | GGGGCGCCTGCCACG GGGCGCGAGCGG GCG CTGCTCGAGCCC TTTGCGGCCGATCTC RSP_2856 1444233 - 1446044 + | putative oligopeptide ABC transporter, periplasmic-binding protein TERM 731 1446269 - 1446231 - T 80 -16.2 -3.19602 | gap 2, opp_overlap 1446234 1446236, overlap 1446229 CTCCTGACAGGAACA GAGGATCCGCCCGGCCCT TCCGC AGGGC-GGGCGGAT-CTC ATTGCGCCACGAACA TERM 732 1446234 - 1446267 + T 81 -19 -2.70932 | gap 1, opp_overlap 1446231 1446229, overlap 1446236 CTGACAGGAACAGAG GATCCGCCCGGCCCT TCCGC AGGGC-GGGCGGATC TCATTGCGCCACGAA TERM 733 1446236 - 1446265 + T 75 -15.8 -2.90075 | gap 1, opp_overlap 1446231 1446229, overlap 1446234 GACAGGAACAGAGGA TCCGCCCGGCCCT TCCGC AGGGC-GGGCGGA TCTCATTGCGCCACG RSP_2855 1449534 - 1446268 - | cation efflux transporter TERM 734 1448452 - 1448422 - G 70 -13.3 -3.37796 | gap 1 GTCCATCACCCAGAA GGTCGGCACCGCCG AGAG CGGCAGCGCC-ACC GCCGCGATGAAGGTC RSP_2854 1450705 - 1449545 - | cation efflux transporter RSP_2853 1451346 - 1450705 - | TetR family transcriptional regulator RSP_2852 1451545 - 1452189 + | polyketide biosynthesis associated protein TERM 735 1452243 - 1452275 + G 71 -6.3 -4.21275 | gap 1, overlap 1452243 AAGCCCGAATTCGTC GG-CATGATCGCGA TGCTCT TCGCGACCGTGGCC TTTTCCATCGATTCC RSP_2851 1452186 - 1453403 + | major facilitator superfamily multidrug-efflux transporter TERM 736 1453414 - 1453444 + T 100 -17.7 -4.2349 | gap 1, opp_overlap 1453404, overlap 1453416 ACTGATAGCCTGCCA CG-CAGGGATGGCC TCCG GGCCATCCCTGTCG TTTTCCGTCTGCAGG TERM 737 1453416 - 1453441 + T 86 -19.1 -3.12666 | opp_overlap 1453404, overlap 1453414 TGATAGCCTGCCACG CAGGGATGGCC TCCG GGCCATCCCTG TCGTTTTCCGTCTGC mfd 1457163 - 1453666 - | transcription-repair coupling factor (helicase) RSP_2849 1457755 - 1457240 - | hypothetical protein hemB 1457899 - 1458903 + | delta-aminolevulinic acid dehydratase RSP_2847 1459018 - 1459587 + | hypothetical protein TERM 738 1459609 - 1459635 + T 100 -25.2 -3.7108 | CATCTTTCGCGATCC GGGCCCCGGGAG CCG CTCCCGGGGCCC TTTCCATGTGCGCCT RSP_2846 1460675 - 1459785 - | putative 3-hydroxyisobutyrate dehydrogenase RSP_2845 1460728 - 1463199 + | putative penicillin acylase (penicillin amidase) RSP_2844 1464911 - 1463661 - | putative GTP-binding protein hfq 1465239 - 1465006 - | RNA-binding protein Hfq TERM 739 1465373 - 1465388 + r 78 -10.4 -4.13767 | GATCGTTAGTCTTGT GCGGCA GGCC TGCCGC TTTTCCGCTCAGCGC trkH1 1466908 - 1465397 - | potassium uptake transporter, transmembrane subunit, TrkH trkA 1468286 - 1466910 - | potassium transporter peripheral membrane component ntrX 1469771 - 1468341 - | nitrogen assimilation transcriptional regulator, NtrX TERM 740 1469133 - 1469075 - G 80 -17.2 -3.24232 | overlap 1469073 CCTCGTCGAAATAGA CGATGCCGCCGTGCGCCTGCTCGAGCAG CCC CTGCTCGATCCCGCGCTCGGCCGTCTCG CGGCCGAAGAGGACC ntrY 1472077 - 1469768 - | nitrogen regulation protein, NtrY, Signal transduction histidine kinase ntrC 1473496 - 1472129 - | nitrogen metabolism transcriptional regulator, NtrC ntrB 1474602 - 1473496 - | nitrogen regulation protein, NtrB signal transduction histidine kinase nifR3 1475579 - 1474599 - | tRNA-dihydrouridine synthase, nifR3 TERM 741 1475211 - 1475253 + g 80 -17 -3.14881 | gap 1, overlap 1475234 CTCGATCAGTGCAAG CGCCCGGTCGGGCTCGCGC ATCAGG GC-CGAGCCCGACCAGCCG TTCGTGACCCGCTTG ispD 1475793 - 1476470 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase ispF 1476579 - 1477058 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase pgpA 1477055 - 1477552 + | putative phosphatidylglycerophosphatase A cinA 1477549 - 1478034 + | putative competence-damaged inducible protein TERM 742 1478096 - 1478055 - T 83 -15.1 -3.6502 | gap 1 CACGCCTGAGCCAAA GCGCT-GGCGGCAGGTCAGA CCG CCTGCCCCGCCGCCCAGCCC GAGGACCAGGCCCAC RSP_2832 1479247 - 1478069 - | flavoprotein TERM 743 1479414 - 1479463 + r 70 -12 -3.36273 | gap 2, opp_overlap 1479408, overlap 1479462 TCGAATCCAGCCGCC CCAGCCAGTCCAACGCCCGAGGGC CCGC GCCCCCGGACGG-GGAC-GGCCGG TTGCTCTTGCGGCCC TERM 744 1479462 - 1479487 + r 71 -9.7 -3.72576 | overlap 1479414 CGGACGGGGACGGCC GGTTGCTCTTG CGGC CCAGAGCAGCC TTTGGTAGAAACGGC cobO 1480358 - 1479750 - | cob(I)yrinic acid a,c-diamide adenosyltransferase RSP_2830 1481584 - 1480355 - | hypothetical protein TERM 745 1481266 - 1481226 - G 91 -10.4 -4.61747 | gap 2, overlap 1481228 1481251 GCAAGAACGAGAAAA TAGGCCAGCGCCGCGGGCTG AAT CAGCCCG-AGCGG-GGCCTC GGGCCGGAGCCCCGC TERM 746 1481264 - 1481228 - G 81 -13 -3.9074 | gap 2, overlap 1481226 1481251 AAGAACGAGAAAATA GGCCAGCGCCGCGGGCTG AAT CAGCCCG-AGCGG-GGCC TCGGGCCGGAGCCCC RSP_2829 1481992 - 1482351 + | hypothetical protein cobW 1482348 - 1483385 + | cobalamin synthesis protein CobW TERM 747 1483842 - 1483875 + G 73 -11 -3.85698 | gap 2 GCGGTGGCGGCGCAG GCCGCGCTCGCGCAGC TGGC GCTG-GCG-GCGGGGC TTTATGCCGGCCCGG TERM 748 1486174 - 1486189 + G 71 -8.2 -4.07687 | TGGCGCAGGACCATG CCGCCC ACGA GGGTGG TTTTGCCGCGGCGCT cobN 1483389 - 1486625 + | cobaltochelatase cobH 1486625 - 1487254 + | precorrin-8X methylmutase cobI 1487254 - 1487985 + | precorrin-2 C20-methyltransferase cobJ 1487982 - 1488716 + | precorrin-3 methyltransferase cobK 1489435 - 1488692 - | cobalt-precorrin-6x reductase cobL 1489434 - 1490597 + | putative precorrin-6y C5,15-methyltransferase TERM 749 1490845 - 1490878 + G 82 -18.1 -3.14132 | gap 1 CTCGATCGCCGAGGC GGCGGCGCTGGTGGCC GCG GGCC-CCGGCGCCACC TTGATGCGGACCCGC cobE 1490594 - 1490968 + | putative precorrin methylase cobM 1490965 - 1491747 + | precorrin-4 C11-methyltransferase cobA 1491744 - 1492469 + | uroporphyrin-III C-methyltransferase cobF 1492560 - 1493324 + | precorrin 6A synthase TERM 750 1493548 - 1493530 - T 72 -13.8 -3.15544 | TTTCATCTTCATCAA GCCCGCAG CTT CCGCGGGC ACTCAAGGAGAGATG aroB 1494885 - 1493773 - | 3-dehydroquinate synthase aroK 1495427 - 1494882 - | shikimate kinase TERM 751 1497221 - 1497231 + G 71 -8.2 -4.08216 | opp_overlap 1497208, overlap 1497210 GACCGGCGTGACGCA GGGC CTC GCCC TTTTCCGCGAACTGG RSP_2816 1495740 - 1497308 + | hypothetical protein xerD 1497308 - 1498243 + | integrase/recombinase XerD corB 1498312 - 1499640 + | hypothetical protein RSP_6073 1500746 - 1499610 - | hypothetical protein RSP_6226 1500964 - 1501341 + | hypothetical protein TERM 752 1501456 - 1501431 - T 100 -19.7 -3.62096 | overlap 1501389 CGGCACCATGGCAAA GGGCGCGGCCC TGTC GGACCGCGCCC CTCGGCAGGCTGATG mttB 1503019 - 1501478 - | putative trimethylamine methyltransferase protein TERM 753 1503124 - 1503113 - R 70 -3.6 -4.52589 | opp_overlap 1503090 CTTGCCGACAGAAAA CGAC ATGC GCCG GAGTTGGCTCTCAGC RSP_2812 1503740 - 1503135 - | hypothetical protein RSP_2811 1504708 - 1503743 - | ABC transporter periplasmic substrate-binding protein RSP_2810 1505485 - 1504712 - | ABC transporter, ATPase subunit RSP_2809 1506585 - 1505485 - | ABC transporter, inner membrane subunit RSP_2808 1507076 - 1507330 + | hypothetical protein TERM 754 1507922 - 1507887 - g 90 -16.8 -3.68024 | gap 1, overlap 1507888 TCTCCGAAGAGACAA GGCCCCCGGCTCCGGCA TCC CGCCGGGGCCGGGA-CC ATCGAGCCTCCAGCA TERM 755 1507922 - 1507888 - g 76 -17 -2.80493 | overlap 1507887 CTCCGAAGAGACAAG GCCCCCGGCTCCGGCA TCC CGCCGGGGCCGGGACC ATCGAGCCTCCAGCA RSP_2807 1507335 - 1507973 + | putative cytochrome b TERM 756 1508334 - 1508299 - T 100 -27.8 -4.13014 | opp_overlap 1508306 TTCAGAGGCTGAAAA TGCAAGATCCGCGGCC GTTG GGCCGCGGATCTTGCA GGGTATAATGGTGGG TERM 757 1508306 - 1508327 + T 82 -17.3 -3.03771 | opp_overlap 1508299 GCTGAAAATGCAAGA TCCGCGGCC GTTG GGCCGCGGA TCTTGCAGGGTATAA TERM 758 1508828 - 1508855 + T 89 -18.4 -3.25823 | opp_overlap 1508830, overlap 1508830 TGGGTCGGCAAAGAA AAGGGGCGCGGC TTTC GCCGCGCCCCTC TTGATCTACAAGCGC TERM 759 1508853 - 1508830 - T 100 -21 -4.86731 | opp_overlap 1508830 1508828 GGTCGGCAAAGAAAA GGGGCGCGGC TTTC GCCGCGCCCC TCTTGATCTACAAGC TERM 760 1508830 - 1508853 + T 93 -21 -3.19602 | opp_overlap 1508830, overlap 1508828 GGTCGGCAAAGAAAA GGGGCGCGGC TTTC GCCGCGCCCC TCTTGATCTACAAGC lon 1511280 - 1508872 - | Lon-A peptidase nemA 1512630 - 1511542 - | putative NADH-flavin oxidoreductase tgt 1513867 - 1512737 - | queuine tRNA-ribosyltransferase TERM 761 1513949 - 1513921 - R 79 -15.2 -3.27525 | opp_overlap 1513920 1513921, overlap 1513916 CGCTCCGAAAGCCAA GGGCGCCGCCCC TTTCC GGCACGGCGCCC CTCTCACTCTGGAGA RSP_2803 1517110 - 1514033 - | RND family multidrug/cation transporter RSP_2802 1518293 - 1517118 - | multidrug/cation efflux pump, membrane fusion protein subunit TERM 762 1518505 - 1518562 + G 77 -16.9 -2.98088 | gap 1 CGCACCGTTGGGCCC GCGGGCATGTCGCTCGACGCGGTGGCCG CCA CGGCCGGCGTGTCGAAGGGCG-GCCTGC TCTATCACTTTCCCA tetR 1518439 - 1519008 + | TetR family transcriptional regulator RSP_6075 1519588 - 1520061 + | hypothetical protein acoR 1520106 - 1522043 + | putative AcoR, transcriptional activator of acetoin/glycerol metabolism TERM 763 1522083 - 1522054 - T 93 -17.1 -3.54543 | opp_overlap 1522053 1522050 ACTGACCTCCGGAAA GACCAGGGGCGGC CGAA GCCGCCCCTCGCC CTCATTTCACGGCTT RSP_2799 1523179 - 1522085 - | putative Zinc-containing alcohol dehydrogenase TERM 764 1523196 - 1523226 + r 78 -16.1 -3.01712 | gap 1, overlap 1523220 ATGTCCTCCCGTTGT GCG-GCCCGCCGGG CGCT CCCGGCGGGCTCGG TCTTCAGGGCCGGCC groEL 1524861 - 1523230 - | chaperonin GroEL RSP_2797 1525745 - 1524945 - | hypothetical protein TERM 765 1525519 - 1525486 - G 79 -16.7 -3.06696 | TTGTCGGCGAAGAGA TGGTCGAGCAGGCGC ACCC GCACCTGCCCGACCC AGGTCAGGGCCGCCA RSP_2796 1526772 - 1525750 - | hypothetical protein RSP_2795 1527201 - 1526833 - | putative regulatory protein of multicomponent monooxygenase RSP_2794 1528271 - 1527213 - | putative monooxygenase beta subunit RSP_2793 1529399 - 1528302 - | putative reductase component of monooxygenase TERM 766 1528641 - 1528631 - G 82 -4.6 -4.77165 | CGCCGTAGAAGAAAA GCAC CTC GCGC GCTTCGCCGCTGGCC RSP_2792 1531152 - 1529470 - | putative monooxygenase alpha subunit TERM 767 1531075 - 1531114 + g 72 -11.4 -3.63515 | gap 1 GTCGGAGATCTTCTT GGTCGCCTCGC-CCACGGA GAT TCCGCGCTGCGAGGTGATC TTGTTCAAGGTGAGG RSP_2791 1531758 - 1532222 + | hypothetical protein RSP_2790 1532219 - 1532440 + | hypothetical protein RSP_2789 1532437 - 1533522 + | hypothetical protein RSP_6076 1533552 - 1533743 + | hypothetical protein TERM 768 1533775 - 1533811 + G 75 -15.2 -3.40403 | gap 2, opp_overlap 1533765, overlap 1533777 AGAATGGTGTCGATG CAGCTCCGGCTGGGCCAG CGG CTGGCCCAG-CGG-GCCG TTCTCGTGCAGCGGG TERM 769 1534576 - 1534605 + G 81 -12.8 -3.91897 | ACCCTCCTTGCCGTG GGGGCGCTGGTG GTGGAG CGCCAGCGCGCC TTTCTGGATGAGGGG rpoN4 1533763 - 1535037 + | sigma-54 factor family protein RSP_2868 1536642 - 1535194 - | inosine-5'-monophosphate dehydrogenase RSP_2869 1537810 - 1536836 - | tellurite resistance protein aglK 1539449 - 1538340 - | ABC alpha-glucoside transporter, ATPase subunit AglK aglG 1540595 - 1539474 - | ABC alpha-glucoside transporter, inner membrane subunit AglG aglF 1541587 - 1540595 - | ABC alpha-glucoside transporter, inner membrane subunit AglF aglE 1543016 - 1541664 - | ABC alpha-glucoside transporter, perplasmic substrate-binding protein RSP_2874 1543355 - 1544677 + | putative Beta-glucosidase A glk 1544696 - 1545649 + | glucokinase RSP_2876 1546621 - 1545836 - | putative carbon monoxide dehydrogenase medium chain coxL 1549004 - 1546632 - | xanthine dehydrogenase, molybdenum binding subunit apoprotein coxS 1549515 - 1549033 - | putative carbon-monoxide dehydrogenase small chain RSP_2879 1550074 - 1549544 - | hypothetical protein gfdS 1552408 - 1550207 - | signal transduction histidine kinase TERM 770 1550582 - 1550628 + g 81 -15.7 -3.53012 | gap 1, overlap 1550583 CACCGCCACCTTGGC CTGCGCCCGCACCG-CCGAGGC ATCG GGCACGGACGGAGCGGGCGCAC TTTCGGCGCGGGGCA TERM 771 1550583 - 1550627 + g 84 -19.2 -2.71712 | gap 1, overlap 1550582 ACCGCCACCTTGGCC TGCGCCCGCACCG-CCGAGGC ATCG GGCACGGACGGAGCGGGCGCA CTTTCGGCGCGGGGC gfdT 1553651 - 1552479 - | hypothetical protein RSP_2882 1554429 - 1553749 - | two component LuxR family transcriptional regulator TERM 772 1554532 - 1554492 - R 71 -11.8 -3.56099 | gap 2, opp_overlap 1554492 1554490, overlap 1554483 1554482 GATAACCCGGCCAAA GGTCGGAGCACCG--GCGCC CTT GCCGCTACGGCGCACCGACC TGTTCTTACCGAGAG pgm 1556383 - 1554749 - | phosphoglucomutase TERM 773 1556323 - 1556339 + g 73 -13.7 -3.40403 | opp_overlap 1556290 1556289 GCGTCTTCTTGCGCA GCCCGGA GGT TCCGGGC TTCTGATCGGAAAAG glgX 1558494 - 1556380 - | glycogen debranching enzyme TERM 774 1556453 - 1556426 - G 85 -19.2 -3.11459 | gap 1, overlap 1556415 1556413 AAGACCAGCACGGAA CGG-GCCGGGGCT TCA AGCCCCGGCGCCG CGGGTTCGGGGCCGG glgA 1559945 - 1558491 - | glycogen synthase glgC 1561313 - 1560042 - | glucose-1-phosphate adenylyltransferase TERM 775 1560732 - 1560750 + g 80 -11.6 -4.08216 | CTCGTCGCCGGGGAT GCCCGGCG GGT CGGCGGGC TTTTCGAGAAAGTCG glgP 1564485 - 1562080 - | glycogen phosphorylase TERM 776 1564521 - 1564500 - H 76 -7.9 -4.25104 | TGGTCCGTAGCAAAA GCTGTCCGA GGTG CCGGACGGC AGGGGTTCGACGAGG RSP_2888 1564999 - 1565433 + | BadM/Rrf2 family transcriptional regulator RSP_2889 1565872 - 1565459 - | transcriptional regulator RSP_2890 1568472 - 1566031 - | copper-translocating P-type ATPase RSP_2891 1568623 - 1568823 + | putative copper chaperone RSP_2892 1568924 - 1569085 + | hypothetical protein TERM 777 1569560 - 1569537 - T 83 -9.4 -4.64676 | opp_overlap 1569539, overlap 1569538 1569539 CCAGGCGGAAGAAAA GGGGCCGGCG CCTG CGCCGGCCTT TTTCTTTTCCGGAAG TERM 778 1569559 - 1569538 - T 70 -12.9 -3.38324 | opp_overlap 1569539, overlap 1569537 1569539 CAGGCGGAAGAAAAG GGGCCGGCG CCTG CGCCGGCCT TTTTCTTTTCCGGAA TERM 779 1569558 - 1569539 - T 73 -16.4 -2.62512 | opp_overlap 1569539, overlap 1569538 1569537 AGGCGGAAGAAAAGG GGCCGGCG CCTG CGCCGGCC TTTTTCTTTTCCGGA TERM 780 1569539 - 1569558 + T 100 -16.4 -5.45802 | opp_overlap 1569539 1569538 1569537 AGGCGGAAGAAAAGG GGCCGGCG CCTG CGCCGGCC TTTTTCTTTTCCGGA TERM 781 1569686 - 1569662 - T 87 -17.2 -3.33696 | opp_overlap 1569665, overlap 1569665 TGCCCGTCGAATGAA GAAGGCCGGG ACGAG CCCGGCCTTC CTCTCAGGACACAGT TERM 782 1569665 - 1569683 + T 70 -13.1 -3.25823 | opp_overlap 1569662 1569665 CCGTCGAATGAAGAA GGCCGGG ACGAG CCCGGCC TTCCTCTCAGGACAC TERM 783 1569683 - 1569665 - T 78 -13.1 -3.81146 | opp_overlap 1569665, overlap 1569662 CCGTCGAATGAAGAA GGCCGGG ACGAG CCCGGCC TTCCTCTCAGGACAC ndk 1570171 - 1569749 - | nucleoside diphosphate kinase TERM 784 1571066 - 1571043 - g 84 -11 -4.2528 | gap 1 GCCGAAGCCAAGAAA CAGG-AGGCCC GCC GGGCCCACCTG CAGAGCTTCGTCGAC RSP_2895 1570299 - 1572146 + | putative ABC transporter, fused ATPase subunits RSP_2896 1572150 - 1572770 + | multidrug ABC transporter RSP_2897 1572868 - 1573443 + | hypothetical protein RSP_2898 1573915 - 1573457 - | DNA polymerase III subunit chi RSP_2899 1575488 - 1574019 - | leucyl aminopeptidase RSP_2900 1575712 - 1576842 + | permease RSP_2901 1576839 - 1577933 + | putative permease RSP_2902 1577933 - 1580077 + | putative organic solvent tolerance protein RSP_2903 1580094 - 1581401 + | PpiC-type peptidyl-prolyl cis-trans isomerase pdxA 1581398 - 1582366 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 785 1582355 - 1582381 + F 75 -4.9 -4.56597 | overlap 1582356 TCGGAGATGGCGCAG GCGCGCGGCTG ATAGC CCGCCGCGGGG TTTTTGCACCCCCGC TERM 786 1583252 - 1583285 + G 77 -14.5 -3.54543 | overlap 1583241 1583262 CGCTCGAAGGCTTCT GCGCTTTGGCCCGCC GATT GGCGGGCTGAGGCCC TTTCGGCCGGTCAGT ksgA 1582444 - 1583280 + | dimethyladenosine transferase RSP_6078 1584552 - 1583725 - | hypothetical protein RSP_2906 1585646 - 1584810 - | putative methylase prfA 1586698 - 1585643 - | peptide chain release factor 1 RSP_2908 1587288 - 1586845 - | hypothetical protein RSP_2909 1588259 - 1587294 - | agmatinase RSP_2910 1589698 - 1588532 - | metal-dependent amidase/aminoacylase/carboxypeptidase mazG 1589910 - 1590716 + | nucleoside triphosphate pyrophosphohydrolase TERM 787 1591776 - 1591755 - g 70 -14.4 -3.21099 | overlap 1591734 CGTCGCCATGACGAA GGCCGCGC CGAACC GCGCGGCC GCGCTGAAGCTGATG RSP_2913 1590979 - 1591989 + | ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein TERM 788 1592043 - 1592067 + F 78 -16.4 -3.01497 | overlap 1592039 GGTAGCGGCTGACCG GCGCTCCGGC AACTC GCCGGGGCGC TCTGCTTTCCCCTCC RSP_2914 1592216 - 1593157 + | nucleoside hydrolase phoR 1594265 - 1593225 - | two-component sensor histidine kinase RSP_2916 1594597 - 1594842 + | hypothetical protein RSP_2917 1596040 - 1594847 - | cystathionine gamma-synthase TERM 789 1596103 - 1596086 - R 82 -14.1 -3.75153 | CCGGCCGAATGGAAA GGGGCGG CCAC CCGCCCC CCGTCAGCGGCCGCG RSP_2918 1596641 - 1596123 - | ferripyochelin binding protein RSP_2919 1597273 - 1596638 - | guanylate kinase RSP_2920 1598168 - 1597278 - | hypothetical protein TERM 790 1598295 - 1598261 - H 78 -12 -3.68302 | TTAACATTTGAATAA CCATTGCGGCCGGAGC CCG GCTTCGCCCGCAGCGG CGCATAACAGAGCGA RSP_6079 1598359 - 1599036 + | hypothetical protein TERM 791 1599068 - 1599085 + T 95 -14.1 -4.29738 | opp_overlap 1599068 CTGCCGGACGAAAAA GCCGCCC CGGA GGGCGGC TTTTCCTGCATATCA TERM 792 1599085 - 1599068 - T 100 -14.1 -4.72272 | opp_overlap 1599068 CTGCCGGACGAAAAA GCCGCCC CGGA GGGCGGC TTTTCCTGCATATCA RSP_2921 1600500 - 1599130 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase RSP_2922 1600645 - 1601658 + | transcriptional regulator RSP_2923 1601836 - 1603020 + | branched chain amino acid ABC transporter periplasmic substrate-binding protein RSP_2924 1603149 - 1603931 + | branched chain amino acid ABC transporter ATPase RSP_2925 1604024 - 1604734 + | branched chain amino acid ABC transporter ATPase RSP_2926 1604738 - 1605748 + | branched chain amino acid ABC transporter inner membrane protein RSP_2927 1605745 - 1607040 + | branched chain amino acid ABC transporter inner membrane protein RSP_2928 1607045 - 1607644 + | hypothetical protein RSP_2930 1608325 - 1607702 - | hypothetical protein TERM 793 1609303 - 1609346 + H 91 -14.6 -3.92324 | gap 2 TCGGGAGGCAGTGAC GGCCGTG-GCCGGACG-GGC AGCGGG GCCGCGACCGGCACACGGTC TTTCGTCTTGACCGC RSP_2929 1609413 - 1609877 + | putative disulfide bond formation protein DsbB hutC 1610578 - 1609892 - | GntR family transcriptional regulator hutF 1611957 - 1610578 - | N-formimino-L-glutamate deiminase hutI 1612029 - 1613216 + | imidazolonepropionase TERM 794 1613310 - 1613366 + G 86 -20.7 -2.89564 | gap 1, opp_overlap 1613265 CCCCCGAGGCGCGCC CCGCCGTCGAGGCGGCCGCCGCC-CG CGTGGC CGAGGCCGCGGCCGGCACGGCGCCGG TCTATGGCGTGAACA hutH 1613216 - 1614739 + | histidine ammonia-lyase TERM 795 1616806 - 1616785 - g 80 -11.5 -4.03234 | opp_overlap 1616802 TGGCTCGCATAGAAA TCGCCCCGC TTCA GCGCGGCGA GCAGCGCCTTGGGTT hutU 1614750 - 1617476 + | urocanase RSP_2937 1617588 - 1618280 + | hypothetical protein RSP_6080 1618713 - 1618285 - | hypothetical protein TERM 796 1618589 - 1618564 - G 71 -8.9 -4.03234 | gap 1, overlap 1618536 1618565 CGCGGCCCAGAGAAA GGCCGC-CGCGG AGA CCGCGAGCAGCA CCGGCAGCGCCGCAC RSP_2939 1619704 - 1619069 - | condensin subunit ScpB RSP_2940 1620489 - 1619701 - | condensin subunit ScpA RSP_2941 1621495 - 1620482 - | putative glycoside hydrolase RSP_2942 1622478 - 1621492 - | hypothetical protein argS 1624300 - 1622549 - | arginyl-tRNA synthetase TERM 797 1622607 - 1622631 + g 80 -6.9 -4.65895 | opp_overlap 1622608, overlap 1622608 CCCGCGCAAATCACA ACGCCCACGGC CCG GGCGAGGGCGA TTTTTGCCTGCGAAA RSP_6081 1624852 - 1624367 - | hypothetical protein RSP_2944 1625454 - 1624843 - | hypothetical protein cycJ 1626070 - 1625615 - | cytochrome c-type biogenesis protein CcmE argC 1627121 - 1626093 - | N-acetyl-gamma-glutamyl-phosphate reductase RSP_2947 1627958 - 1627146 - | glutamate racemase RSP_2948 1631482 - 1628096 - | indolepyruvate ferredoxin oxidoreductase RSP_2950 1631639 - 1632532 + | LysR family transcriptional regulator TERM 798 1632533 - 1632564 + F 95 -14.5 -4.11216 | gap 1, overlap 1632537 CAGCAGCAGACCTGA GG-AGGAGGCCCGG CATGT CCGGGCCTCTTGCC TTTTCGGGCTAAGCC TERM 799 1632537 - 1632559 + F 82 -16.3 -3.37091 | overlap 1632533 AGCAGACCTGAGGAG GAGGCCCGG CATGT CCGGGCCTC TTGCCTTTTCGGGCT TERM 800 1632759 - 1632778 + F 100 -15 -6.07969 | overlap 1632755 TCCCTGTTGGACTTG GGCCGAGC TTCT GCTCGGCC TTTTTTTTGCTTTTC purL 1632900 - 1635140 + | phosphoribosylformylglycinamidine synthase II RSP_2952 1635374 - 1635616 + | BolA-like protein RSP_2953 1635676 - 1636041 + | glutaredoxin-related protein TERM 801 1636083 - 1636039 - T 73 -16.5 -2.57013 | gap 2, overlap 1636035 CGCGAAGCCAACGCA TGATCCGGCGCCGGGCGCGCC CTCGC GGCGCGCC-GGCACCCG-TCA GACATCCGCCCTCGG RSP_2954 1636640 - 1636266 - | hypothetical protein RSP_2955 1637091 - 1636633 - | hypothetical protein TERM 802 1638289 - 1638246 - g 95 -17.4 -4.1822 | gap 1 GCCGACGTCAAGAAA GCCTGGGAAGCCATCGGCGCC CGC GGCGCCGA-GGCCCGCAAGGC CTGGGACGAGCGTCT tktA 1637358 - 1639376 + | transketolase TERM 803 1639395 - 1639421 + T 100 -18 -5.53991 | opp_overlap 1639398, overlap 1639398 GGCCCCAAGACAGCG AAAGGCCGCGCC CGA GGCGCGGCCTTC TTTTTTTGGTGCCTC TERM 804 1639418 - 1639398 - T 100 -19.7 -3.76775 | opp_overlap 1639395 1639398 CCCAAGACAGCGAAA GGCCGCGCC CGA GGCGCGGCC TTCTTTTTTTGGTGC TERM 805 1639398 - 1639418 + T 100 -19.7 -4.8487 | opp_overlap 1639398, overlap 1639395 CCCAAGACAGCGAAA GGCCGCGCC CGA GGCGCGGCC TTCTTTTTTTGGTGC RSP_2957 1639748 - 1639449 - | hypothetical protein RSP_2958 1640745 - 1639774 - | hypothetical protein TERM 806 1641051 - 1640998 - H 87 -20.4 -3.04144 | gap 2, opp_overlap 1641022, overlap 1641000 TTGCGACCCGGAAGA CAGCCGATGCGCGGCAGGCCACGCTG CGGG CAGCGTGCCCTG-CGCGCAA-GGCCG GGCCGCCCCCGAATT TERM 807 1641049 - 1641000 - H 85 -19.4 -3.07895 | gap 2, opp_overlap 1641022, overlap 1640998 GCGACCCGGAAGACA GCCGATGCGCGGCAGGCCACGCTG CGGG CAGCGTGCCCTG-CGCGCAA-GGC CGGGCCGCCCCCGAA gapB 1641318 - 1642319 + | glyceraldehyde-3-phosphate dehydrogenase TERM 808 1642337 - 1642370 + F 100 -20.5 -3.59979 | opp_overlap 1642344, overlap 1642344 GCTGCCGTTCCAGAT TGAGAAATGCCGGCC CTCG GGCCGGCATTTTTCA TTTCGGGTCAACGAC TERM 809 1642363 - 1642344 - f 91 -15 -3.95073 | opp_overlap 1642337 1642344 TTCCAGATTGAGAAA TGCCGGCC CTCG GGCCGGCA TTTTTCATTTCGGGT TERM 810 1642344 - 1642363 + F 100 -15 -4.99134 | opp_overlap 1642344, overlap 1642337 TTCCAGATTGAGAAA TGCCGGCC CTCG GGCCGGCA TTTTTCATTTCGGGT RSP_6082 1642528 - 1642683 + | hypothetical protein RSP_2960 1643198 - 1642710 - | pantetheine-phosphate adenylyltransferase RSP_2961 1643702 - 1643268 - | CBS domain-containing proteins RSP_2965 1644650 - 1643757 - | LysR family transcriptional regulator RSP_2962 1644753 - 1646252 + | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 811 1646276 - 1646301 + F 100 -21.9 -4.06502 | CCTGCTCCACCTCCC GCAGCCGGCGC CCCC GCGCCGGCTGC TTTCCTTTGCGGGTG RSP_2963 1646777 - 1647433 + | Crp/FNR family transcriptional regulator RSP_2964 1647676 - 1647888 + | hypothetical protein TERM 812 1647892 - 1647949 + T 74 -15.3 -3.05384 | gap 1, opp_overlap 1647893 ATGAAGGGCTGAAGG ACGCCGCCGCGCCGCCTGCGCGTCGCTC AGG GCGCGATGGGCTG-CGGCGCGGCCGCCA TTGGGTGCAGGGCAA TERM 813 1647948 - 1647893 - T 74 -16.6 -2.72379 | gap 1, opp_overlap 1647892 TGAAGGGCTGAAGGA CGCCGCCGCGCCGCCTGCGCGTCGCTC AGG GCGCGATGGGCTG-CGGCGCGGCCGCC ATTGGGTGCAGGGCA uvrA 1650981 - 1648123 - | excinuclease ABC subunit A TERM 814 1648344 - 1648360 + g 76 -3.5 -4.63527 | overlap 1648336 GCTCCACCAGCTCGT GCAGCAC CTC GAGCAGC TTTTTCACATCCTCG RSP_2967 1652234 - 1651098 - | major facilitator transporter TERM 815 1651892 - 1651872 - G 79 -13.9 -3.60296 | overlap 1651851 GAGCGTCATGGCAAA GCCCTGCCG CGC CGGCGGGGC GATCTGCGCGATGAG TERM 816 1652412 - 1652393 - R 90 -16.4 -3.75629 | opp_overlap 1652397 1652406 CAGCCCCAACGCAAA CGGCGCCC CGGA GGGCGCCG CCGCAGCCTTCTCAA RSP_2968 1653843 - 1652437 - | dihydrolipoamide dehydrogenase RSP_2969 1654495 - 1653920 - | hypothetical protein TERM 817 1654041 - 1654025 - G 70 -9.3 -3.75153 | overlap 1654026 GTTGCGGAAGGGAAA GCGCCCG AAG CGGGCGA TGATGGCCGCATGGG RSP_2970 1655958 - 1654702 - | major facilitator transporter RSP_2971 1657078 - 1656038 - | S-adenosylmethionine tRNA ribosyltransferase-isomerase RSP_2972 1660448 - 1657164 - | hypothetical protein TERM 818 1658723 - 1658771 + g 78 -11.6 -3.92373 | gap 1, opp_overlap 1658691, overlap 1658714 CCAGCAGCGACAGGG CCGCCGT-GACGCCGCTCTCGCT GTTG AGCGAGATCCGCGCCTGCGCCGG TTTCTCGGTCACGTC TERM 819 1660597 - 1660635 + G 77 -10.8 -4.04174 | GCGATGGCGGGTCCA CCGTGTCCCTGTCGGGCC TTC GGCCCGGCAAGGTGGTGG TTTACTTCTATCCCA RSP_2973 1660539 - 1661000 + | peroxiredoxin RSP_2974 1661411 - 1662754 + | putative metalopeptidase RSP_2975 1662744 - 1663262 + | hypothetical protein TERM 820 1663294 - 1663312 + T 100 -17.4 -4.18018 | GACCGGCACGACCAG GGGCGCCC ATC GGGCGCCC TTTTGCATGGCAGCG RSP_2976 1664234 - 1663458 - | hypothetical protein TERM 821 1663898 - 1663860 - G 76 -11.9 -3.84271 | gap 2, opp_overlap 1663860 1663862 1663886 CCAGAACAGGAAGAA GATCACCACGATCGCCGCC ATG GACGG-GATC-TGGCGATC CTTCTGGCTGAGGAT TERM 822 1664028 - 1664013 - G 72 -11.8 -3.62096 | GCCGAGGATGGGAAA GCCCGC AGCA GCGGGC AAGATCCACCAGAGA TERM 823 1664123 - 1664113 - G 74 -4.6 -4.56978 | GCGGCAAAGAACAAA CCGA AGG CCGG GGCGCGTCTGAAGTC TERM 824 1664376 - 1664338 - R 72 -3.6 -4.56597 | overlap 1664339 1664340 CTGCCCTCGGAAAAA GGGCGGAGGCGCAGCG CGCGGGC CGCTGCAGGACCGCCG CGGGTTGGAGGCAGG TERM 825 1664550 - 1664603 + r 70 -13 -3.37017 | gap 3, opp_overlap 1664499, overlap 1664564 1664574 1664592 GCACTGCAACGGCCT GCCGCCGCGCGG-GCGACAGC-CCTGC GCC GCCGGTGCAGCCGCGCCGCGCGA-GGC TTACTCTTCGGCGTT prfB 1665731 - 1664604 - | peptide chain release factor 2 mrcA 1668389 - 1665840 - | penicillin-binding protein 1A (PBP-1a) amiC 1669716 - 1668481 - | N-acetylmuramoyl-L-alanine amidase aspAT 1670916 - 1669765 - | aminotransferase RSP_2981 1671084 - 1671827 + | putative protein-disulfide isomerase TERM 826 1671852 - 1671869 + T 100 -14.1 -5.07652 | GCGACCGAGCCCCAA GGCGCCC TCCG GGGCGCC TTTTCTTTTGGAGAA TERM 827 1672119 - 1672148 + T 74 -12.1 -3.54543 | gap 1, overlap 1672140 CCGCGCGAGGCGATC CGCGA-TGACGGCC TGA GGCCGCCGCTCGCG TTTGCGACGGTGCGT ispG 1673296 - 1672163 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 828 1673393 - 1673371 - R 82 -15.6 -3.53012 | opp_overlap 1673392 CCGGCTGCGCCCAAA TGCCCTGCCC CTC GGGCAAGGCA CGGCGCGCCCGCGCG RSP_2983 1674554 - 1673427 - | hypothetical protein hemA 1675975 - 1674752 - | 5-aminolevulinate synthase RSP_2985 1676679 - 1676110 - | hypothetical protein RSP_2986 1676870 - 1678282 + | hypothetical protein RSP_2987 1678279 - 1678722 + | acetyltransferase TERM 829 1678904 - 1678872 - T 100 -18.6 -4.07568 | gap 1, opp_overlap 1678878, overlap 1678878 GCCTGCCCGCCAAAA GC-AAAAGGCCGGGC AGAA GCCCGGCCTTTTCGC AATCCTGAAAGAAGT TERM 830 1678878 - 1678897 + T 100 -16.4 -4.12188 | opp_overlap 1678878 1678872 CCGCCAAAAGCAAAA GGCCGGGC AGAA GCCCGGCC TTTTCGCAATCCTGA TERM 831 1678897 - 1678878 - T 100 -16.4 -4.67038 | opp_overlap 1678878, overlap 1678872 CCGCCAAAAGCAAAA GGCCGGGC AGAA GCCCGGCC TTTTCGCAATCCTGA RSP_2988 1679961 - 1679197 - | Pirin-related protein RSP_2989 1680129 - 1680470 + | hypothetical protein TERM 832 1680498 - 1680467 - T 71 -2.9 -4.58395 | opp_overlap 1680470 1680472, overlap 1680472 GTTAGGCGGCAAAAA GTAAAGGGGACCG AATTAA CGATCCCCTCTTT ATCTTTATCTGCTAA TERM 833 1680470 - 1680495 + T 72 -4.6 -4.43283 | opp_overlap 1680467 1680472, overlap 1680472 AGGCGGCAAAAAGTA AAGGGGACCG AATTAA CGATCCCCTC TTTATCTTTATCTGC TERM 834 1680493 - 1680472 - T 78 -9.4 -4.32046 | opp_overlap 1680470 1680472, overlap 1680467 GCGGCAAAAAGTAAA GGGGACCG AATTAA CGATCCCC TCTTTATCTTTATCT RSP_2990 1683964 - 1680503 - | hypothetical protein RSP_2991 1684452 - 1684120 - | hypothetical protein TERM 835 1684577 - 1684551 - R 76 -7.4 -4.34402 | opp_overlap 1684551 GTCTTGACATGAAAA TACCTCGAAC AAAGAAG ATTCGAGGTA TTTAGATTGTCTATT RSP_2992 1685206 - 1684595 - | hypothetical protein TERM 836 1685141 - 1685128 - G 71 -6.7 -4.24745 | GACCAGCAACAGAAA TGGTC GTCG GACCA ATACCATTCCAAATC RSP_2993 1685922 - 1685278 - | hypothetical protein RSP_2994 1688079 - 1685926 - | hypothetical protein TERM 837 1688319 - 1688299 - R 100 -10.4 -5.34309 | opp_overlap 1688299 ATGACCAAACAAAAA GCCCCGGA TCTAC TCCGAGGC TTCTGCAATTACGTT RSP_6243 1689598 - 1689113 - | putative endonuclease TERM 838 1689736 - 1689721 - R 100 -8.2 -5.63517 | opp_overlap 1689721 TCGTGAAATAAAAAA CCCGAC CTAA GCCGGG TTCTCTTCGTTATTG RSP_6244 1690626 - 1690255 - | hypothetical protein RSP_6245 1691094 - 1690672 - | hypothetical protein RSP_6246 1691412 - 1691095 - | bacteriophage head-tail adaptor RSP_6247 1691755 - 1691414 - | Phage-related protein, DNA packing TERM 839 1691735 - 1691754 + g 74 -4.8 -4.56314 | opp_overlap 1691737, overlap 1691736 1691737 ATTTAGAAAAAGAAA AAGCCCGC CGAA GCGGGCCA TTTTCCTTATGTTAG TERM 840 1691752 - 1691737 - G 100 -11.8 -5.69262 | opp_overlap 1691736 1691735 1691737 TTAGAAAAAGAAAAA GCCCGC CGAA GCGGGC CATTTTCCTTATGTT RSP_2995 1692888 - 1691779 - | phage major capsid protein, gp36 RSP_2996 1693485 - 1692961 - | prohead peptidase TERM 841 1693119 - 1693095 - G 76 -3.5 -4.64766 | opp_overlap 1693114, overlap 1693098 1693113 GCGAGACTTCAAAAA GATCAACTTCT TTA AGCAGTCGGTC GCCGCTATTCGAATA RSP_2997 1694708 - 1693482 - | putative head portal protein RSP_2998 1696334 - 1694748 - | putative terminase large subunit TERM 842 1695943 - 1695931 - G 80 -6.2 -4.68705 | ACAATCCGAACAAAA CGCG ATATA CGCG GACTCATCCTGATCA RSP_2999 1696761 - 1696321 - | hypothetical protein TERM 843 1696998 - 1696975 - R 86 -10.3 -4.67038 | opp_overlap 1696975 TGCGGAAAATGAAAA GACCGGACC TTAATT GATCCGGTC TTGTGCAAATGCTGT RSP_3000 1697336 - 1697025 - | hypothetical protein RSP_3001 1697896 - 1697390 - | endonuclease TERM 844 1697950 - 1697923 - R 75 -6.3 -4.50058 | opp_overlap 1697922 1697925, overlap 1697925 GATGTAGAATGAAAA TAGGCAGACCA ATTGAA TGATCTGCCTG AATTTGAAATTGAAA TERM 845 1697948 - 1697925 - R 70 -8.9 -3.85296 | opp_overlap 1697925 1697922, overlap 1697923 TGTAGAATGAAAATA GGCAGACCA ATTGAA TGATCTGCC TGAATTTGAAATTGA RSP_6248 1698358 - 1697978 - | putative class I holin RSP_6249 1698719 - 1698327 - | hypothetical protein TERM 846 1699597 - 1699577 - R 79 -2.5 -4.8543 | CAATGGGGACAAAAA GAAGCCG GGTCTTA CGGATTC ATCATCCTGCCCGGC RSP_6250 1700622 - 1699690 - | hypothetical protein TERM 847 1700158 - 1700172 + g 74 -4.2 -4.59773 | overlap 1700145 TGTCGTGGCCGTGCT GTGATC GTT GAGCAC TTTTTCCCGATCAAA TERM 848 1703321 - 1703295 - R 75 -5.1 -4.57516 | gap 1, overlap 1703296 ACATGCAAATCAAAA TCATCGG-CCCA TCGA TGGGACCGACGT TACCGGAAGGCTCAG TERM 849 1704108 - 1704074 - R 86 -5.7 -5.01811 | gap 1, opp_overlap 1704080, overlap 1704080 TGACTAAATCAAAAA GACA-AAGCCCCCGGC AATC GCTAGGGGCTTCTTTC ATTGTTCGGCAGTTG TERM 850 1704101 - 1704080 - R 83 -9.3 -4.59653 | opp_overlap 1704080, overlap 1704074 AATCAAAAAGACAAA GCCCCCGGC AATC GCTAGGGGC TTCTTTCATTGTTCG TERM 851 1704080 - 1704101 + r 75 -9.3 -4.15577 | opp_overlap 1704080 1704074 AATCAAAAAGACAAA GCCCCCGGC AATC GCTAGGGGC TTCTTTCATTGTTCG spbB 1704520 - 1704125 - | histone-like nucleoid-structuring protein H-NS RSP_0003 1706277 - 1704748 - | putative site-specific recombinase RSP_0004 1706530 - 1706240 - | hypothetical protein guaA 1706705 - 1708261 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 852 1708528 - 1708552 + F 76 -14.2 -3.53012 | opp_overlap 1708520 CAAATATCCTCGGGG GTGCGGGGGC AGACA GCCCCCGCCC TTTCCGCACGCGCCG RSP_0006 1708728 - 1709615 + | DMT family permease RSP_0007 1709694 - 1710818 + | putative outer membrane protein RSP_0008 1710871 - 1711836 + | drug/metabolite exporter (DME) family protein RSP_0009 1711869 - 1712738 + | hypothetical protein RSP_0010 1712767 - 1713684 + | homoserine O-succinyltransferase RSP_0011 1713674 - 1714627 + | hydrolase or acyltransferase (alpha/beta hydrolase) RSP_0013 1714668 - 1715552 + | hypothetical protein RSP_0014 1715549 - 1716166 + | TetR family transcriptional regulator RSP_0015 1717415 - 1716318 - | ABC spermidine/putrescine transporter, ATPase subunit RSP_0016 1718218 - 1717412 - | ABC spermidine/putrescine transporter, inner membrane subunit RSP_0017 1719102 - 1718215 - | ABC spermidine/putrescine transporter, inner membrane subunit RSP_0018 1720933 - 1719530 - | GntR family transcriptional regulator RSP_0019 1721018 - 1721245 + | hypothetical protein TERM 853 1721267 - 1721294 + T 81 -9.8 -4.2717 | gap 1, overlap 1721271 1721271 CGCACATGTCCCCAT GACTGGGCCGGGC TCT GCCCGGC-CGCTC TTTTCCTGCCCTCAT TERM 854 1721271 - 1721292 + T 82 -13.7 -3.73756 | gap 1, overlap 1721267 1721271 CATGTCCCCATGACT G-GGCCGGGC TCT GCCCGGCCGC TCTTTTCCTGCCCTC RSP_0020 1722043 - 1721336 - | hypothetical protein TERM 855 1722363 - 1722344 - R 100 -16.4 -4.1021 | opp_overlap 1722336 1722337 1722335 CTCGACAATGACAAA GGGCCCGC CGAG GCGGGCCC TTGCAGATCTTTCCG TERM 856 1722407 - 1722431 + r 72 -6.4 -4.2528 | gap 1, opp_overlap 1722387, overlap 1722409 TCGAGAACTGGAAGC TGCGGC-GGGC TTTC GCCTTGCCGTA TTTCTTCCGTTCCAC rpsI 1722866 - 1722384 - | 30S ribosomal protein S9 rplM 1723334 - 1722870 - | 50S ribosomal protein L13 TERM 857 1723477 - 1723464 - R 84 -5.3 -5.00616 | GGGGGTTGCAAAAAA GGTAT TAGC ATACC CCATAGCAAACCCCT RSP_6083 1724330 - 1723539 - | hypothetical protein TERM 858 1724457 - 1724491 + H 91 -15.1 -3.86935 | gap 1, opp_overlap 1724457 1724458, overlap 1724458 GGCTCTTGCACGAAA G-CGAAGGGGCGGC TCGCTCCC GCCGCCCCTTCGTC TTCTTGTCATAATTC TERM 859 1724490 - 1724457 - H 88 -15.3 -3.72576 | opp_overlap 1724457 1724458, overlap 1724458 GGCTCTTGCACGAAA GCGAAGGGGCGGC TCGCTCCC GCCGCCCCTTCGT CTTCTTGTCATAATT TERM 860 1724458 - 1724489 + H 93 -18.8 -3.5121 | opp_overlap 1724458 1724457, overlap 1724457 GCTCTTGCACGAAAG CGAAGGGGCGGC TCGCTCCC GCCGCCCCTTCG TCTTCTTGTCATAAT TERM 861 1724489 - 1724458 - H 82 -18.8 -2.83403 | opp_overlap 1724457 1724458, overlap 1724457 GCTCTTGCACGAAAG CGAAGGGGCGGC TCGCTCCC GCCGCCCCTTCG TCTTCTTGTCATAAT rfbC 1724906 - 1725439 + | dTDP-4-dehydrorhamnose 3,5-epimerase RSP_0025 1727114 - 1725765 - | NAD(P)-dependent oxidoreductase RSP_0026 1728166 - 1727111 - | epimerase/dehydratase TERM 862 1728065 - 1728091 + g 76 -12.3 -3.86015 | opp_overlap 1728062 CTTGCGATAGAAGCC GGTGTCGAGGC CCACC GCCTCGATGCC TTTCTCAAGCAGGTA RSP_0027 1729155 - 1728364 - | hypothetical protein RSP_0028 1729383 - 1730381 + | short chain dehydrogenase TERM 863 1731557 - 1731511 - g 73 -16.5 -2.89797 | opp_overlap 1731517, overlap 1731508 1731506 GGCGCAGAAATACCA GCAGGTGCTGCCGCGGCTTGT CGAAT ACAAGCCGCGCCTGATCCTGC GCCCGCAGGAGATCT RSP_0029 1730543 - 1732042 + | acetyl-CoA hydrolase/transferase family protein TERM 864 1732188 - 1732149 - T 86 -19.2 -3.21099 | gap 1 GCGTGCGACGATGAA CGCCCGCGCGGC-CGCCCC TTC GCGACGTGCCGCGGGGGCG CCGCAACGTCCGAAG RSP_0030 1734816 - 1732315 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) RSP_6084 1735036 - 1734863 - | hypothetical protein TERM 865 1735181 - 1735192 + H 90 -7.2 -5.08824 | CCTTAACGGCCCTCA GCCG CCGC CGGC TTTTTTGCGTCCGGA RSP_6085 1735288 - 1736106 + | hypothetical protein fliA 1736961 - 1736242 - | sigma factor FliA (sigma-28 group, flagellar) RSP_0033 1737971 - 1736958 - | hypothetical protein flhA 1740089 - 1737975 - | flagellar biosynthesis protein, FlhA RSP_0035 1740409 - 1740810 + | hypothetical protein RSP_6086 1740807 - 1741892 + | hypothetical protein flgA 1741889 - 1742557 + | flagellar basal-body P-ring formation protein FlgA flgM 1742579 - 1742893 + | putative FlgM, negative regulator of flagellin synthesis RSP_6087 1742922 - 1743293 + | hypothetical protein RSP_6088 1743944 - 1743312 - | Sel1 repeat-containing protein RSP_6089 1744393 - 1743941 - | hypothetical protein TERM 866 1744381 - 1744410 + g 75 -12.9 -3.61398 | opp_overlap 1744361 GGCGGGCGGGCCTCC TCCCTGCCTGC AACGGCGC GCGGGCAGGGA TTGTTAGCCAAGGGC RSP_6090 1744503 - 1744988 + | hypothetical protein RSP_0038 1745042 - 1745230 + | hypothetical protein TERM 867 1745376 - 1745349 - T 78 -8.4 -4.26076 | GCAGCCGTAGGAAAA GGGCGCCG TGGGATCTCTTC CGGCGCCC CTCGCGCCATCGGCC RSP_0039 1745875 - 1745558 - | hypothetical protein fliS 1746252 - 1745872 - | putative flagellar protein FliS RSP_0041 1747117 - 1746536 - | hypothetical protein cheA3 1750542 - 1747255 - | chemotaxis histidine protein kinase, CheA3 cheY6 1750973 - 1750569 - | chemotaxis response regulator, CheY6 tlpT 1752880 - 1751177 - | putative cytoplasmic chemoreceptor, TlpT slp 1753593 - 1752877 - | Slp TERM 868 1753556 - 1753503 - G 75 -13.7 -3.43492 | gap 1, opp_overlap 1753501 1753503, overlap 1753504 1753506 CGAGATCCACGAGAA GCACC-CGGCCCGCCCCCGCGCGG ACGAGCG CCGCGCCGAGGTTGGCCGCGGTGG TGGTCTTGCCCACGC TERM 869 1753555 - 1753504 - G 75 -17.2 -2.65774 | gap 1, opp_overlap 1753503 1753501, overlap 1753503 1753506 GAGATCCACGAGAAG CACC-CGGCCCGCCCCCGCGCGG ACGAGCG CCGCGCCGAGGTTGGCCGCGGTG GTGGTCTTGCCCACG cheW4 1754115 - 1753606 - | CheW protein cheB2 1755231 - 1754134 - | chemotaxis methylesterase, CheB2 cheR3 1756040 - 1755231 - | MCP methyltransferase, CheR-type cheA4 1757236 - 1756037 - | chemotaxis histidine protein kinase, CheA4 RSP_6091 1757686 - 1757381 - | hypothetical protein torF 1758112 - 1759248 + | Torf protein fliE 1759262 - 1759585 + | flagellar protein FliE fliF1 1759605 - 1761317 + | flagellar FliF M-ring protein fliG 1761319 - 1762341 + | flagellar motor switch protein FliG fliH 1762345 - 1763169 + | flagellar protein FliH fliI 1763166 - 1764494 + | flagellum-specific ATPase FliI fliJ 1764496 - 1764903 + | flagellar protein FliJ TERM 870 1766217 - 1766271 + G 72 -12.7 -3.53012 | CCGTCGGGCGGGTCC GCTCGCGGAGGCGGGC-CGGGCCGACG ACG CCTCT-CCCGTGCCCGCCTCGGCGCAC TTTGCGGCCGGCGCC fliK 1764958 - 1767057 + | FliK, flagellar hook-length control protein fliL 1767068 - 1767640 + | flagellar biosynthesis protein, FliL fliM 1767644 - 1768615 + | flagellar switch protein FliM TERM 871 1768682 - 1768721 + F 77 -11.3 -3.87815 | overlap 1768684 CTCTCGCCCCGTGCC GTCGATCCGCGGCGCCG AGGCGA TGCCGCCCCGGATCGTC TTTCTCACCCTGACA TERM 872 1768684 - 1768719 + F 73 -12.5 -3.52906 | overlap 1768682 CTCGCCCCGTGCCGT CGATCCGCGGCGCCG AGGCGA TGCCGCCCCGGATCG TCTTTCTCACCCTGA fliN 1768772 - 1769068 + | flagellar motor switch FliN protein fliO 1769200 - 1769457 + | flagellar protein FliO fliP 1769454 - 1770359 + | flagellar biosynthesis protein FliP fliQ 1770359 - 1770625 + | flagellar protein FliQ fliR 1770625 - 1771434 + | flagellar protein FliR TERM 873 1771509 - 1771520 + G 79 -5.8 -4.67038 | overlap 1771498 1771512 ACGGCTCCATCGTCA CCTC GAAG GAGG TTTTCGTTTTCGCCA TERM 874 1772013 - 1772040 + G 70 -14.8 -2.85351 | TCTCGGCGCTTCTCA TCGTGCTCGCCG TCAT CGGCGGGCTCGA TCTCGTCTGGCAGGC flhB 1771421 - 1772563 + | flagellar protein FlhB RSP_0067 1772617 - 1773336 + | hypothetical protein TERM 875 1773946 - 1773964 + G 74 -7.3 -4.1891 | overlap 1773949 TGCGGCATGGCTGAG GCTCGCG CCGAA CGCGCGC TTTCTCTTCGCGCGC RSP_6092 1773344 - 1774012 + | hypothetical protein rpoN2 1775353 - 1774019 - | sigma-54 factor (RpoN2) TERM 876 1775504 - 1775477 - R 100 -19.9 -3.53012 | opp_overlap 1775465 1775497 GTGCTTGTCGCGAAA GCCCTCCGCCC CTGTGC GGGCGGAGGGC CGATGCGGTGCCGTC fliC 1777010 - 1775529 - | flagellar filament protein TERM 877 1777118 - 1777104 - H 81 -7.1 -4.56597 | opp_overlap 1777108 1777109 CGCCCCTCCCAAAAA TCCGC GGCAG GCGGA GGCTGCCCTTTGACA TERM 878 1778061 - 1778115 + G 70 -14.9 -2.94099 | gap 1, opp_overlap 1778054, overlap 1778039 GGGCAAGACCTCTGG CCCCGCGGTCGTCTCGGTCAGCCGCG ACAG CGCG-CTGGCCGAGGCGGCCATGGCC TATATGGTCGAGGAG fliD 1777249 - 1778904 + | flagellar hook-associated protein 2 (filament cap protein) fleQ 1780164 - 1778935 - | sigma-54 dependent trancsriptional regulator RSP_0072 1780986 - 1780189 - | invasion protein flgL 1782222 - 1780993 - | flagellar hook-associated protein 3 FlgL TERM 879 1781701 - 1781685 - G 70 -13.7 -3.14051 | overlap 1781683 GCACCGCCATGAAGA CCTCGGC GCC GCCGAGG CTGGTGGCCACGCGC flgK1 1786321 - 1782230 - | FlgK flagellar hook-associated protein 1 flgJ 1786731 - 1786429 - | hypothetical protein TERM 880 1786467 - 1786511 + g 74 -4.8 -4.58395 | GAGGGGCGAACTGGC GCTCGATCGCGTCG-GCGATGC CCA GCCCCGCGCGCC-CGGCCGAGC TTTTTGCAAGCTCCA flgI 1787846 - 1786731 - | flagellar basal body P-ring protein TERM 881 1787184 - 1787152 - G 70 -9.8 -3.73953 | gap 2, overlap 1787154 1787157 AGCAGGCTCATGAAA GACACGCGCCGCGCGG GAT CGGC-CGGCGCGCG-C ACCCGGATCGAGGTC TERM 882 1787183 - 1787154 - G 75 -13.5 -3.45324 | gap 1, overlap 1787152 1787157 CAGGCTCATGAAAGA CACGCGCCGCGCGG GAT CGGC-CGGCGCGCG CACCCGGATCGAGGT flgH 1788511 - 1787843 - | flagellar L-ring protein flgG 1789307 - 1788519 - | flagellar distal rod protein flgF 1790116 - 1789361 - | flagellar proximal rod protein FlgF TERM 883 1789966 - 1789921 - G 70 -13.8 -3.27475 | overlap 1789919 1789924 GCGCGGAGGAGAAGA GATGCGGCCCCCGCTCGGTC TGGAAG GCCCGCGCCGAGGCCGCGTC CATCGCCTTGAGGAA TERM 884 1789993 - 1790042 + g 83 -17.1 -3.31461 | overlap 1789984 GGAACCGCGCGTCGC CCTCGTTCGTCAGATCGCGCCGG AAGC CCGGCACGGTCTGGTTGGCGAGG TTCTGCGCCTGGATC flgE 1791396 - 1790125 - | flagellar hook protein FlgE flgD 1792092 - 1791421 - | flagellar scaffolding protein FlgD flgC 1792510 - 1792094 - | flagellar basal-body rod protein FlgC TERM 885 1792368 - 1792397 + g 70 -12.7 -3.28924 | opp_overlap 1792366, overlap 1792396 CTCGTCTCGAACACG GGCCGCAGCGGCC GGAA GGCCGTCTCGGCC TTGTCCGAGACGGTG flgB 1792896 - 1792510 - | flagellar proximal rod protein FlgB RSP_0084 1792986 - 1794152 + | hypothetical protein RSP_0085 1797099 - 1794433 - | PAS/PAC sensor hybrid histidine kinase RSP_0086 1797623 - 1797096 - | hypothetical protein TERM 886 1798048 - 1798017 - g 79 -17.4 -3.0497 | gap 1, overlap 1798026 AGATGACCGTGAAGA CCGC-CAAGAGCCTC GAC GAGGCTCTCGAGCGG ATCAAGGAACACGGG RSP_0087 1797908 - 1798540 + | two component transcriptional regulator, LuxR TERM 887 1798730 - 1798696 - T 78 -16.4 -3.05715 | AAGCCGTGCAGGCAA GCTGCGGGAACGACGC CGA ACGCCGCTCCCGCAGT CCGTCACGCCGCGCG RSP_0088 1799234 - 1798734 - | ycfI, putative structural proteins TERM 888 1799289 - 1799265 - H 72 -8.5 -4.07568 | TGTCGGTTGCGAAAA CGTTCGGCAAG GGC CTTGCCCACCG GATCGCCTGACGAAC TERM 889 1799662 - 1799708 + G 73 -14.3 -3.35679 | gap 2 TCGAGACCGGCCTCC GGGCCATGCCCG-GCGCGG-CGG AGA CCGTCCGCGCGCTGGCGGTGCCC TTCTGCCTCGCCACG RSP_0089 1799406 - 1800092 + | hypothetical protein smoC 1800089 - 1801042 + | operon regulator SmoC smoE 1801150 - 1802460 + | ABC sorbitol/mannitol transporter, periplasmic binding protein smoF 1802562 - 1803434 + | ABC sorbitol/mannitol transporter, inner membrane subunit smoG 1803436 - 1804266 + | ABC sorbitol/mannitol transporter, inner membrane subunit smoK 1804274 - 1805272 + | ABC sorbitol/mannitol transporter, ATPase subunit smoS 1805274 - 1806044 + | sorbitol dehydrogenase TERM 890 1806338 - 1806376 + G 70 -14.4 -3.15544 | ATCGAGCTCGATCCG GCCGGCCACCGCGCCCGC CAA GTGGGGGCGATGGTAGGC TTCCTGCCGGTCGAG mtlK 1806098 - 1807531 + | mannitol dehydrogenase smoM 1808034 - 1809131 + | TRAP-T family sorbitol/mannitol periplasmic binding protein SmoM TERM 891 1809144 - 1809187 + T 77 -17.7 -2.57211 | gap 1, opp_overlap 1809154, overlap 1809154 TGATCCCGAGCGCCG CACGAAAGAAGACCCCGGAG CCGCA CTCCGGGGTCTT-TTTCATG GTTCTCGCGGCACAT TERM 892 1809178 - 1809154 - T 100 -17.9 -4.00042 | opp_overlap 1809154 1809144 CGCCGCACGAAAGAA GACCCCGGAGC CGC ACTCCGGGGTC TTTTTCATGGTTCTC TERM 893 1809154 - 1809178 + T 100 -17.2 -4.8269 | opp_overlap 1809154, overlap 1809144 CGCCGCACGAAAGAA GACCCCGGAG CCGCA CTCCGGGGTC TTTTTCATGGTTCTC TERM 894 1809250 - 1809281 + T 73 -15.8 -2.59431 | opp_overlap 1809254, overlap 1809245 TCTCGGCCCCGAAAG GAAACGGCGGCACC CGAG GGTGCCGCCGGTCC TCAATTCTGCGCAGG TERM 895 1809277 - 1809254 - T 100 -19.6 -4.05788 | opp_overlap 1809250 1809245 GGCCCCGAAAGGAAA CGGCGGCACC CGAG GGTGCCGCCG GTCCTCAATTCTGCG RSP_6094 1811330 - 1809282 - | TRAP dicarboxylate family transporter DctM subunit RSP_0099 1811941 - 1811327 - | TRAP dicarboxylate family transporter DctQ subunit nuoA 1812328 - 1812714 + | putative NADH dehydrogenase I chain A nuoB 1812711 - 1813328 + | NADH dehydrogenase (ubiquinone), 20 kDa subunit nuoCD 1813325 - 1815067 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoE 1815064 - 1815537 + | NADH dehydrogenase subunit E nuoF 1815534 - 1816784 + | respiratory-chain NADH dehydrogenase, 51 kDa subunit TERM 896 1819205 - 1819238 + G 75 -14.5 -3.40403 | gap 1, overlap 1819220 CTCCATCCCGAGGAT GCGGC-CGCCCTCGGC GCG GCAGAGGGCGCGCGGC TTCTGATCGACGGGA nuoG 1816781 - 1819363 + | NADH dehydrogenase subunit G nuoH 1819560 - 1820516 + | putative NADH dehydrogenase I chain H nuoI 1820513 - 1821007 + | NADH dehydrogenase subunit I nuoJ 1821004 - 1821498 + | NADH dehydrogenase I chain J nuoK 1821495 - 1821803 + | putative NADH dehydrogenase I chain K nuoL 1821805 - 1823907 + | NADH-ubiquinone oxidoreductase, chain 5 nuoN 1825347 - 1826690 + | NADH-ubiquinone oxidoreductase, chain 4 TERM 897 1827400 - 1827455 + G 100 -24.7 -3.02144 | gap 1, opp_overlap 1827369 GCAGGCCACCGGCGA GCGGCTCGAGCCGCCGCCGGCCTGCG AGACG CGCTGGCTCGAGG-GGCTCGAGCCGC TCTTCGAGGGGGTGG RSP_0113 1826723 - 1828219 + | phospholipase D/transphosphatidylase TERM 898 1828464 - 1828488 + G 79 -17.2 -3.13475 | CGACCTCGTGGGGGG CAGCGTGCCG CTCCT CGGCACGCTG TTCGATGTGGCCTTC RSP_0114 1828216 - 1828560 + | hypothetical protein RSP_0115 1829826 - 1828582 - | class I triheme cytochrome c RSP_0116 1830259 - 1829852 - | hypothetical protein RSP_0117 1832843 - 1830270 - | cytochrome c oxidase, subunit I RSP_0118 1833814 - 1832840 - | cytochrome c oxidase, subunit IIC TERM 899 1833904 - 1833916 + r 83 -9.1 -4.56597 | TGACTTCGTTCCGAG GTCCC GCA GGGAC TTTTTCAGCGAGGAG RSP_0119 1834919 - 1834149 - | PA-phosphatase related phosphoesterase TERM 900 1835196 - 1835227 + r 73 -7.2 -4.11394 | CAGCGTCGCGCCCAG GTTGCGAAGCTCGG CGAG CTGCGCTTCGGAGC TTTTGGCGATCCCGT RSP_6095 1835654 - 1835172 - | transcriptional activator RSP_6096 1835702 - 1836361 + | LuxR family transcriptional regulator cerR 1836472 - 1837173 + | LuxR family transcriptional regulator cerA 1837195 - 1837353 + | community escape response protein TERM 901 1837417 - 1837428 + G 72 -3.6 -4.57073 | AGGACATGTTCCGGT TGCG CAAG CGCG TTTTTGCGGACCGTC cerI 1837350 - 1837982 + | autoinducer synthesis protein TERM 902 1838174 - 1838136 - g 71 -14.5 -3.08471 | gap 1, opp_overlap 1838130 1838139, overlap 1838126 CAGAAGGTGACCGAA CTCGCCGCCCGGCGCCCC CCGC GGGACGACCGG-GGCGAG CACGGCTGGCTTGTG RSP_0124 1838097 - 1838369 + | hypothetical protein mdoG 1838690 - 1840312 + | glucan biosynthesis protein G RSP_0126 1840312 - 1840512 + | hypothetical protein TERM 903 1840548 - 1840605 + G 81 -2.4 -4.96501 | gap 2, overlap 1840512 1840511 1840551 CCGTCGCGCCGTCAC GCTGGCCTCG-C-GTCTCGTTGCGGCGG CGAT CAGCCTCACCGCGGCAGCCGGGGCCTTC TTTCTTTTTCTGCAG TERM 904 1840551 - 1840602 + G 77 -7.1 -4.56117 | gap 2, overlap 1840512 1840511 1840548 TCGCGCCGTCACGCT GGCCTCG-C-GTCTCGTTGCGGCGG CGAT CAGCCTCACCGCGGCAGCCGGGGCC TTCTTTCTTTTTCTG opgH 1840516 - 1842303 + | glucosyltransferase MdoH opgC 1842296 - 1843495 + | OpgC protein TERM 905 1843633 - 1843667 + F 83 -15.1 -3.57971 | gap 1, opp_overlap 1843634 1843637, overlap 1843637 ATCGCCCGCTCCAGA AGACCGAAGGGCACCC TCAC GGGTGCCCTTC-GTCG TTTGCGGATCCGTGT TERM 906 1843666 - 1843634 - f 89 -18.6 -3.28712 | gap 1, opp_overlap 1843633 1843637, overlap 1843637 TCGCCCGCTCCAGAA GACCGAAGGGCACCC TCAC GGGTGCCCTTC-GTC GTTTGCGGATCCGTG TERM 907 1843664 - 1843637 - f 85 -21.4 -2.52623 | opp_overlap 1843633 1843637, overlap 1843634 CCCGCTCCAGAAGAC CGAAGGGCACCC TCAC GGGTGCCCTTCG TCGTTTGCGGATCCG TERM 908 1843637 - 1843664 + F 87 -21.4 -2.91695 | opp_overlap 1843637 1843634, overlap 1843633 CCCGCTCCAGAAGAC CGAAGGGCACCC TCAC GGGTGCCCTTCG TCGTTTGCGGATCCG metN 1844020 - 1845081 + | ABC D-methionine uptake transporter, ATPase subunit metI 1845071 - 1845745 + | ABC D-methionine uptake transporter, inner membrane subunit TERM 909 1846385 - 1846349 - g 73 -16.5 -2.85437 | overlap 1846346 1846378 CATCAACACCAACTA CGCGCTGGCCTCGGGGC TGA ACCCCAAGACCGACGCG ATCGCGACCGAGAAG metQ 1845774 - 1846550 + | ABC D-methionine uptake transporter, substrate-binding protein TERM 910 1846558 - 1846582 + F 100 -12.8 -5.14563 | overlap 1846559 CCTGGTGACATTCGG CGGGCGGAGC CACAC GCTCCGCCCC TTTTTTCCTCGGCCC TERM 911 1846559 - 1846581 + F 90 -16.3 -3.68256 | overlap 1846558 CTGGTGACATTCGGC GGGCGGAGC CACAC GCTCCGCCC CTTTTTTCCTCGGCC RSP_0133 1846786 - 1848276 + | NahC family Na(+)/H(+) antiporter TERM 912 1849271 - 1849243 - f 100 -13.9 -5.27938 | gap 1 ATCCGCAAAGAAAAA CCCCGAC-GCGC TGGCGG GCGCAGTCGGGG CGGATAGTGAGGGTG RSP_0134 1849400 - 1849684 + | hypothetical protein RSP_0135 1849677 - 1851116 + | hypothetical protein RSP_0136 1851235 - 1852068 + | putative integrase for prophage CP-933U RSP_0137 1853036 - 1852329 - | hypothetical protein RSP_0138 1853524 - 1853174 - | hypothetical protein rpsF 1854206 - 1854604 + | 30S ribosomal protein S6 rpsR 1854625 - 1854852 + | 30S ribosomal protein S18 rplI 1854865 - 1855434 + | 50S ribosomal protein L9 TERM 913 1855478 - 1855459 - T 100 -16.4 -4.21462 | opp_overlap 1855459 ACCGATCAGGGAAAA GCCGCGCC TCCG GGCGCGGC TTTTTTCGTTGCGCC TERM 914 1855459 - 1855478 + T 100 -16.4 -5.26875 | opp_overlap 1855459 ACCGATCAGGGAAAA GCCGCGCC TCCG GGCGCGGC TTTTTTCGTTGCGCC TERM 915 1855699 - 1855675 - T 72 -5.5 -4.52589 | overlap 1855676 CCCTCGGACAGAAAA GGGCCGTCCGC GCC GGAGCCGACCC TCGGAAAAGAAAAGG TERM 916 1855734 - 1855713 - T 100 -15.1 -5.07652 | overlap 1855676 CCTCGGAAAAGAAAA GGCCGCCCC CGAA GGAGCGGCC CCCCCGTCGCCATGG tig 1857092 - 1855758 - | trigger factor TERM 917 1857304 - 1857279 - H 76 -7.4 -4.35116 | opp_overlap 1857279 1857291, overlap 1857281 GATGCGAGAGGAAAA GCGCGGCTCC GGCAGA GGCGCCGCCC TGTCTTCGCCGCAAT TERM 918 1857363 - 1857343 - H 75 -10.5 -4.03234 | opp_overlap 1857343 1857347 TCTCTGCCACAGAAA TGAACCACC GCC GGTGATTCA TCCTTGGGGCGAGCG RSP_6097 1857400 - 1857870 + | hypothetical protein TERM 919 1858815 - 1858802 - f 71 -9.5 -3.78953 | AGCCTCATGAGGAAA GGCCG ATGT CGGCC ACCGTCACCGCGACG TERM 920 1859542 - 1859527 - f 86 -6.1 -4.85599 | CGCATTGCACAAAAA TCGGG CGCACC CCCGA GATTCCCCCCTCGAG glnB 1859643 - 1859981 + | nitrogen regulatory protein P-II glnA 1860063 - 1861472 + | L-glutamine synthetase TERM 921 1861492 - 1861515 + T 100 -18.2 -3.96618 | opp_overlap 1861495, overlap 1861495 GGCGGCGAGGGACAG GAAGGGCGCC TCCG GGCGCCCTTC TTCTTTGGCGTTCAG TERM 922 1861495 - 1861512 + T 90 -14.1 -4.1023 | opp_overlap 1861495, overlap 1861492 GGCGAGGGACAGGAA GGGCGCC TCCG GGCGCCC TTCTTCTTTGGCGTT TERM 923 1861512 - 1861495 - T 74 -14.1 -3.2794 | opp_overlap 1861492 1861495 GGCGAGGGACAGGAA GGGCGCC TCCG GGCGCCC TTCTTCTTTGGCGTT TERM 924 1861629 - 1861596 - T 71 -11.8 -3.61517 | gap 3, opp_overlap 1861616 ATCGCCCCGGAAGAA GCGGCCGCGTCAGAGCG CGC CGCTC-G-CGCGGC-GC CAGCCTCCTCTCGCG RSP_0148 1862717 - 1861665 - | Signal transduction histidine kinase RSP_0149 1863151 - 1862714 - | CheY-like receiver protein RSP_0150 1864632 - 1863148 - | multi-sensor signal transduction histidine kinase RSP_0152 1864928 - 1866067 + | P-loop ATPase RSP_0151 1866064 - 1867374 + | hypothetical protein TERM 925 1867553 - 1867535 - T 100 -17.4 -4.8622 | opp_overlap 1867535 GCTGTGAACGAAAAA GGCGCCCG CTG CGGGCGCC TTCGTGTGCGACGGG TERM 926 1867535 - 1867553 + T 87 -17.4 -3.25823 | opp_overlap 1867535 GCTGTGAACGAAAAA GGCGCCCG CTG CGGGCGCC TTCGTGTGCGACGGG RSP_0153 1868254 - 1867577 - | hypothetical protein RSP_0154 1869273 - 1868401 - | 3-hydroxyisobutyrate dehydrogenase RSP_0155 1870301 - 1869270 - | enoyl-CoA hydratase RSP_0156 1871437 - 1870298 - | Acyl-CoA dehydrogenase RSP_6098 1871854 - 1871561 - | hypothetical protein TERM 927 1871740 - 1871769 + g 78 -12.1 -3.90856 | gap 1 CGCTTTGGGTGTGGA CCGTGCCGCGGCTC GCC GAGGCGCGG-GCGG TTTCGTTCGAGGCTT RSP_0157 1872961 - 1872062 - | Beta-mannanase TERM 928 1872634 - 1872668 + g 70 -13.5 -3.17075 | TGGCGTCATAGGCGC CGCGGCGGATGCCCT CGCGC AGGGCCTCGGCCGTG TTCCGTTCGGAGCGG RSP_0158 1874858 - 1872975 - | cellulose synthase-like protein TERM 929 1874481 - 1874508 + g 73 -9.8 -3.88291 | CTCGAGCGTGCGGCG GACCACCTCGAA CGGC TCCGAGGGGGTC TTTGTCACGATCATG galE-2 1875834 - 1874842 - | UDP-galactose 4-epimerase RSP_0160 1876864 - 1875827 - | NAD-dependent epimerase/dehydratase family protein TERM 930 1877119 - 1877130 + H 79 -2.2 -4.81685 | TCCCTTTTTATATCT CAGG TTGA TCTG TTTTTGGTAATTGAT TERM 931 1877939 - 1877892 - g 75 -16.2 -3.04144 | opp_overlap 1877877, overlap 1877926 1877927 CGTTCACCGCCAAGA CCGGGGTGGGCGTGGTGTCGGT CGAC ACCGACAACCCGGCCACGCCGA TCAAGGCGCAGGTCG RSP_0161 1877726 - 1878826 + | spermidine/putrescine-binding periplasmic protein RSP_0162 1878943 - 1879134 + | hypothetical protein RSP_0163 1880878 - 1879205 - | putative iron(III) ABC transporter, fused inner membrane subunits TERM 932 1881011 - 1880957 - R 74 -14.1 -3.25823 | gap 1 GGCCCCCGACAGGAA CCCG-CGGCGGAGGGCGACCGCCTCG GGCC CGAGGCGGCGACCCGCGGCCATCCGG CAGCCGATGCCCCCG RSP_0164 1881285 - 1881031 - | hypothetical protein RSP_0165 1881422 - 1881637 + | hypothetical protein dksA 1882361 - 1882044 - | DnaK suppressor protein TERM 933 1882141 - 1882180 + g 82 -14.3 -3.78775 | gap 1 CAGAAGCCATATTCG TCCGCGTCGATCCGGGCG AGCGC CGCCGTGATCG-CGCGGA TTTCCTGCTGACCCG TERM 934 1882593 - 1882625 + H 71 -10.5 -3.78775 | gap 1, overlap 1882571 CGCCGGCTGTGCACC GGCCGCCGGAGCGT GAACCG GCGC-CCTGCGGCC TTTCCTCCTGCGGCG RSP_0167 1882687 - 1883118 + | hypothetical protein TERM 935 1883135 - 1883159 + T 70 -12.7 -3.28791 | overlap 1883149 1883152 AGGCAGGTTACGGGT GCGGCGCCGCG AGG CGCTGCGCGGC TTCTGAGCCGCGCAT TERM 936 1883152 - 1883173 + T 75 -15.9 -2.82623 | overlap 1883135 1883149 GGCGCCGCGAGGCGC TGCGCGGCT TCTG AGCCGCGCA TCCTTCTGCCGCCCA RSP_6099 1884348 - 1883377 - | flagellar switch protein FliM RSP_0169 1887157 - 1884473 - | Na+/solute symporter RSP_0170 1887447 - 1887157 - | hypothetical protein RSP_0171 1887812 - 1887444 - | response regulator receiver protein RSP_0172 1889260 - 1887974 - | transcriptional regulator TERM 937 1889115 - 1889135 + g 75 -14.7 -3.4252 | opp_overlap 1889114 1889113, overlap 1889116 AGCCGCGCCAGAACC TCGTCGCCG ATC CGGCGACGG TTGTGCTCGATCAGG TERM 938 1889116 - 1889134 + g 71 -16 -2.65298 | opp_overlap 1889114 1889113, overlap 1889115 GCCGCGCCAGAACCT CGTCGCCG ATC CGGCGACG GTTGTGCTCGATCAG TERM 939 1889388 - 1889365 - R 80 -17.4 -2.87881 | overlap 1889379 GAAGGGCGCGAGAGA GGACCGGGCC GAAA GGCCCGGCCC CGAGCCTGTCAGGCG RSP_0173 1890242 - 1889397 - | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase ucpA 1890992 - 1890252 - | short-chain dehydrogenase TERM 940 1891098 - 1891076 - H 71 -10.4 -3.79909 | opp_overlap 1891086 1891088 1891090, overlap 1891051 1891050 1891077 GGAAATTATCAATAA TCCGCCCGCC GAG GGCCGGCGGC ACCCGCAAAGGCTGG RSP_0175 1891185 - 1892126 + | lactate dehydrogenase and related dehydrogenase RSP_0176 1893944 - 1892163 - | dihydroxy-acid dehydratase RSP_0177 1894242 - 1895624 + | FAD/FMN-containing dehydrogenase TERM 941 1895629 - 1895668 + T 70 -12.1 -3.34192 | TCCTGCCGTAGGGCG GC-AAGGCGAGGGGCGCGC CGCA GCGCGCCCCT-GCCAGAGC TTACTTCAGCGCCTT RSP_0179 1896649 - 1895669 - | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA RSP_0180 1897530 - 1896679 - | ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit RSP_0181 1898462 - 1897527 - | ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit TERM 942 1898004 - 1898046 + g 75 -15.5 -3.37796 | overlap 1897991 1898005 GATCGGGATGGTCTG GCTCGCGATGGCCCAGGGC ATCAC GCTCTGGTCCATCGCGCGG TTGTGGATGATGCCG TERM 943 1898005 - 1898045 + g 82 -19 -2.62463 | overlap 1897991 1898004 ATCGGGATGGTCTGG CTCGCGATGGCCCAGGGC ATCAC GCTCTGGTCCATCGCGCG GTTGTGGATGATGCC TERM 944 1898922 - 1898893 - R 72 -6.4 -4.25283 | overlap 1898894 1898897 ATGTCCGCATCAAAA GCCAGCGCCCG-CG CGAT CGACGCGCGCTG-C TGCATCCCCCCCCGA dht 1900823 - 1899372 - | dihydropyrimidinase TERM 945 1900920 - 1900946 + r 74 -16.5 -2.78384 | opp_overlap 1900911 1900910 1900908 1900936 AAATATCCTCGGGGG GTCCGGGGGGC AGACA GCCCCCCGGCC TGTCCTCAGGCCACG RSP_0184 1902211 - 1900952 - | allantoate amidohydrolase RSP_0185 1902349 - 1902981 + | TetR family transcriptional regulator RSP_0186 1903171 - 1903782 + | TetR family transcriptional regulator TERM 946 1903818 - 1903795 - T 76 -13.8 -3.40867 | opp_overlap 1903796, overlap 1903796 TGAGGCAGGAAGGAA CGGGCTCCCC TCGC GGGGAGCCCT TAGGTCACTCGGCGG TERM 947 1903796 - 1903817 + T 82 -17.3 -3.07816 | opp_overlap 1903795 1903796 GAGGCAGGAAGGAAC GGGCTCCCC TCGC GGGGAGCCC TTAGGTCACTCGGCG TERM 948 1903817 - 1903796 - T 77 -17.3 -2.64199 | opp_overlap 1903796, overlap 1903795 GAGGCAGGAAGGAAC GGGCTCCCC TCGC GGGGAGCCC TTAGGTCACTCGGCG RSP_0187 1905127 - 1903823 - | dihydropyrimidine dehydrogenase RSP_0188 1905739 - 1905200 - | hypothetical protein RSP_0189 1907140 - 1905803 - | putative oxidoreductase accB 1907274 - 1907906 + | biotin carboxyl carrier protein TERM 949 1908138 - 1908102 - g 75 -13 -3.65522 | opp_overlap 1908136 CAGCTATCTCAACAA GGCCTCGATCATCTCG GCCTG CGAGATCACCGGGGCC GAGGCCGTCCATCCG accC 1907914 - 1909260 + | acetyl-CoA carboxylase biotin carboxylase subunit RSP_0193 1910244 - 1909873 - | hypothetical protein aat 1909280 - 1909924 + | leucyl/phenylalanyl-tRNA--protein transferase RSP_0194 1910711 - 1910241 - | ABC transporter substrate-binding protein RSP_0195 1911085 - 1910711 - | NADH dehydrogenase TERM 950 1911188 - 1911159 - R 84 -10 -4.43189 | gap 1, overlap 1911162 AGGAACGGCAGAAAA GAAGAAGGCGGGC GCCCG GCCCGCCTTCA-C ATCCACGCGCGGAGG TERM 951 1911186 - 1911162 - R 100 -17.2 -4.32669 | overlap 1911159 AACGGCAGAAAAGAA GAAGGCGGGC GCCCG GCCCGCCTTC ACATCCACGCGCGGA TERM 952 1911199 - 1911228 + r 90 -13.5 -3.99374 | TTCACATCCACGCGC GGAGGCGGCCGTC AGCT GGCGGTCGCGTCC TTCTTCTTCGTGACC clpX 1912475 - 1911210 - | ATP-dependent protease ATP-binding subunit TERM 953 1912602 - 1912556 - R 70 -12.9 -3.31144 | opp_overlap 1912564 1912564 1912583, overlap 1912563 1912564 CCCGGACCTTCACAA CGCCAAATCGCCCTCCGCCGA TGCAC CCGGCGGAGGGCCGTTCGTCA CTTCGCCGTGTCGTC TERM 954 1912595 - 1912563 - R 78 -12.6 -3.69354 | opp_overlap 1912564 1912564 1912583, overlap 1912556 1912564 CTTCACAACGCCAAA TCGCCCTCCGCCGA TGCAC CCGGCGGAGGGCCG TTCGTCACTTCGCCG TERM 955 1912594 - 1912564 - R 74 -16.1 -2.81291 | opp_overlap 1912564 1912564 1912583, overlap 1912563 1912556 TTCACAACGCCAAAT CGCCCTCCGCCGA TGCAC CCGGCGGAGGGCC GTTCGTCACTTCGCC TERM 956 1912564 - 1912595 + r 77 -15.2 -3.21912 | gap 1, opp_overlap 1912564 1912563 1912556, overlap 1912564 1912583 TTCACAACGCCAAAT CG-CCCTCCGCCG ATGCACC CGGCGGAGGGCCG TTCGTCACTTCGCCG clpP 1913232 - 1912600 - | ATP-dependent Clp protease proteolytic subunit ClpP TERM 957 1913378 - 1913331 - R 100 -10.7 -5.00616 | gap 3, overlap 1913369 GGGCGGTGGAAAAAA TGGCCC-GGCTCCCGTTCCTCTCC CTT GAAGCGGA--GGAAGCCCGGGCCA TGGGCCGCCCTCACA RSP_0198 1914007 - 1913399 - | phosphatidylglycerophosphate synthase RSP_0200 1914123 - 1915328 + | hypothetical protein RSP_0201 1915325 - 1917013 + | ABC transporter, fused inner membrane subunits RSP_6101 1917010 - 1917654 + | ABC transporter, ATPase subunit RSP_0202 1917787 - 1918257 + | hypothetical protein RSP_0203 1919653 - 1918334 - | signal transduction kinase protein RSP_0204 1919694 - 1920605 + | metallo-beta-lactamase family protein TERM 958 1920754 - 1920744 - f 78 -6.8 -4.65895 | CGCCGGAGCCAAAAA TCCC TGA GGGA TCAGCTACATGAGAG TERM 959 1920788 - 1920772 - g 82 -15.1 -3.57918 | opp_overlap 1920772 AGCTACATGAGAGAA GCCCGCC ACC GGCGGGC TTTCTTGTTTTGCTT TERM 960 1920772 - 1920788 + G 100 -15.1 -4.71463 | opp_overlap 1920772 AGCTACATGAGAGAA GCCCGCC ACC GGCGGGC TTTCTTGTTTTGCTT RSP_0205 1920763 - 1921188 + | hypothetical protein RSP_0206 1921707 - 1921201 - | hypothetical protein RSP_0207 1922249 - 1921743 - | hypothetical protein RSP_0208 1923312 - 1922251 - | hypothetical protein TERM 961 1923254 - 1923272 + g 72 -11.7 -3.66874 | opp_overlap 1923243 ACAAGGGCGGTGTAG CCCGAGC CGGTC GCTCGGG TTTCCATGGGCTTGC RSP_0209 1923868 - 1923314 - | prophage Lp3 protein 18 RSP_0211 1925028 - 1923868 - | hypothetical protein RSP_0212 1925456 - 1925115 - | HNH nuclease RSP_0213 1927102 - 1925447 - | Phage terminase-like protein large subunit TERM 962 1925751 - 1925726 - G 71 -8.9 -4.03234 | gap 1, overlap 1925727 GCCGCGCCAGACAAA GGGCACACGGGC AAG GCCCGCG-GCCT GCATCGCCTCGGTGA TERM 963 1926960 - 1926978 + g 83 -3 -5.00616 | opp_overlap 1926949, overlap 1926954 1926961 GCAATGGCCCTCGAG GCCGGG TCTTTCC CCCGGA TTTTTTCCAGAAGCG RSP_0214 1927404 - 1927099 - | phage protein RSP_0215 1928904 - 1927567 - | hypothetical protein RSP_0216 1929337 - 1929125 - | hypothetical protein RSP_6102 1930242 - 1929613 - | hypothetical protein int 1931503 - 1930262 - | phage-related integrase TERM 964 1931742 - 1931772 + r 93 -14 -4.14243 | opp_overlap 1931744 1931749, overlap 1931744 1931749 AGGGATCAGCTACAT GAGAAAAGCCCGCC TCT GGCGGGCTTTCCTG TTTTCCGCTGGACTG TERM 965 1931744 - 1931770 + r 85 -16.6 -3.6692 | opp_overlap 1931744 1931749, overlap 1931742 1931749 GGATCAGCTACATGA GAAAAGCCCGCC TCT GGCGGGCTTTCC TGTTTTCCGCTGGAC TERM 966 1931770 - 1931744 - R 79 -18.8 -2.65264 | opp_overlap 1931744 1931742 1931749, overlap 1931749 GGATCAGCTACATGA GAAAAGCCCGCC TCT GGCGGGCTTTCC TGTTTTCCGCTGGAC TERM 967 1931765 - 1931749 - R 100 -15.1 -4.51378 | opp_overlap 1931749 1931744 1931742, overlap 1931744 AGCTACATGAGAAAA GCCCGCC TCT GGCGGGC TTTCCTGTTTTCCGC TERM 968 1931749 - 1931765 + r 95 -15.1 -4.07678 | opp_overlap 1931744 1931749, overlap 1931744 1931742 AGCTACATGAGAAAA GCCCGCC TCT GGCGGGC TTTCCTGTTTTCCGC mcpM 1934158 - 1932095 - | methyl accepting chemotaxis protein TERM 969 1934087 - 1934031 - G 75 -16.4 -3.05384 | gap 1, opp_overlap 1934068 TCCGCCTCGACCGAA GCCTGC-GCGGCCTCCCGGAGGCGCGA AGTA TCGAGCGTCAGGATGGCCGCGGCCGGC AGAAGCCCCGCCAGC RSP_0219 1934696 - 1934944 + | hypothetical protein TERM 970 1935376 - 1935324 - g 73 -14 -3.30771 | gap 1, opp_overlap 1935312 1935358 1935359, overlap 1935325 CCACACCGCCGAGAA GCTCGGCGAGGTGTTCCGCGGCGCC GCCG GGCACCGCGGC-CGCTTCGCCAAGG GCGAGGCCACGGCCT TERM 971 1935375 - 1935325 - g 75 -17.5 -2.58249 | gap 1, opp_overlap 1935312 1935358 1935359, overlap 1935324 CACACCGCCGAGAAG CTCGGCGAGGTGTTCCGCGGCGCC GCCG GGCACCGCGGC-CGCTTCGCCAAG GGCGAGGCCACGGCC RSP_0220 1935301 - 1935510 + | hypothetical protein RSP_6103 1935581 - 1936066 + | hypothetical protein TERM 972 1936257 - 1936295 + G 81 -2.4 -4.95758 | gap 2, overlap 1936251 1936262 1936262 GTCTTCAGAGTTGGC CGGTTGGCGGCCAGATGC TCTTT GCGTTTGGC-GCCC-CTG TTTTTCTGATCTGGT RSP_0221 1936160 - 1938697 + | plasma membrane H+-transporting two-sector ATPase, C subunit RSP_0223 1938711 - 1939982 + | hypothetical protein RSP_0224 1939988 - 1942159 + | ATP-dependent helicase TERM 973 1942411 - 1942396 - T 95 -10.4 -4.85195 | overlap 1942388 AAAACAACGGAAAAA TCCGGC CGCA GCCGGA TGGGGAGAACGCTTT RSP_6104 1944140 - 1943574 - | calcium-binding protein RSP_0226 1944352 - 1945401 + | naringenin-chalcone synthase RSP_0227 1945398 - 1945901 + | hypothetical protein hmuS 1948387 - 1947434 - | putative hemin transport protein RSP_0229 1945888 - 1947486 + | multidrug efflux pump, MF superfamily RSP_0230 1950069 - 1948474 - | neutral zinc metallopeptidase RSP_6105 1950509 - 1950102 - | hypothetical protein TERM 974 1950627 - 1950585 - R 72 -9.1 -4.07568 | opp_overlap 1950593 TCTTGTTCCGCAAAA GCGAACGACCG-GCTGCGGCG GAT CGCCGTGGAGCGGTC-TTCGC AATGCGGGCGCGGAC motB 1951747 - 1950647 - | flagellar MotB protein motA 1952518 - 1951757 - | flagellar motor protein MotA tlpL 1954142 - 1953030 - | TlpL, putative cytoplasmic chemoreceptor RSP_6106 1954977 - 1954543 - | hypothetical protein moaA 1955064 - 1956098 + | molybdenum cofactor biosynthesis protein A RSP_0236 1957724 - 1956381 - | AgaE protein argE 1958887 - 1957724 - | acetylornithine deacetylase RSP_0238 1960305 - 1959022 - | hypothetical protein TERM 975 1960569 - 1960540 - R 89 -18.5 -3.27704 | overlap 1960523 1960524 1960535 ACCCCCCAAACGGAA TGCGCGCCCCGCC GGGG GGCGGAGCGCGCG CAAGGGGACGGACCC PntB 1962038 - 1960590 - | pyridine nucleotide transhydrogenase beta subunit pntA 1963620 - 1962049 - | NAD(P) transhydrogenase subunit alpha TERM 976 1963721 - 1963692 - R 86 -10.1 -4.63932 | gap 1, opp_overlap 1963716, overlap 1963679 CATTGCGCAAGAAAA TTGC-ACAAGACGG TTG CCGCCTTGCAGCAA GTTGCAGATTTCGTC RSP_0241 1964286 - 1963759 - | S-isoprenylcysteine methyltransferase-like protein TERM 977 1965335 - 1965363 + G 72 -13.1 -3.53012 | overlap 1965336 TATCCGATCATGCAG GCGCTGATCGCGC GCG GCGTGATCGGCGA TTTCCGCGCGCCCGA TERM 978 1965336 - 1965362 + G 76 -16.6 -2.71712 | overlap 1965335 ATCCGATCATGCAGG CGCTGATCGCGC GCG GCGTGATCGGCG ATTTCCGCGCGCCCG RSP_0242 1964324 - 1965514 + | kynureninase RSP_0243 1965738 - 1966766 + | putative lipoprotein TERM 979 1966792 - 1966812 + T 100 -19.7 -3.66178 | CCCGTTGCTCTGATC GGGCCGCCC CTC GGGCGGCCC TTTCGCATTGCGCCC RSP_0244 1967999 - 1967154 - | glutamine amidotransferase TERM 980 1968209 - 1968153 - R 80 -17.2 -2.87211 | gap 1 ATCGGGCGGGAGACA GCTTCCGCATGACCCGCGCAGGGCGGC GGGC GTCGCCCTGCACGGAGCG-GCCGAAGC ACGGCCGTGCTCCGG RSP_0245 1969428 - 1968226 - | Serine-pyruvate aminotransferase/aspartate aminotransferase TERM 981 1969529 - 1969478 - H 82 -16.4 -3.28712 | gap 1, overlap 1969488 CCCGCCTCCGCAGAA GGTCAATCGACGCGCGCGGAC-CCG AAC CGGCGGCCGCGCGCGGGGACCGGCC GCCCCTCGCCGCCTT TERM 982 1969519 - 1969488 - H 79 -19.4 -2.55551 | gap 1, overlap 1969478 CAGAAGGTCAATCGA CGCGCGCGGAC-CCG AAC CGGCGGCCGCGCGCG GGGACCGGCCGCCCC RSP_0246 1969599 - 1971371 + | ABC lipid efflux transporter, fused ATPase and inner membrane subunits RSP_0247 1971361 - 1972128 + | aminomethyltransferase related to GcvT RSP_0248 1972837 - 1972274 - | elongation factor P RSP_6107 1973046 - 1973372 + | hypothetical protein TERM 983 1973376 - 1973350 - T 71 -10.8 -3.53811 | GCCATGCGCTCGAAA TGGATCAGGCAG AAG CGGCCTGAGCCA TCCGTCATCGACAGG TERM 984 1973390 - 1973419 + T 84 -16.5 -3.53091 | opp_overlap 1973395 1973396, overlap 1973396 CATCCGTCATCGACA GGAAAGCGCGCCC TTCC GGGCGCGTTTTTC TTTGGGCGAAGGGCT TERM 985 1973414 - 1973395 - T 73 -10.6 -3.84825 | opp_overlap 1973390 1973396, overlap 1973396 GTCATCGACAGGAAA GCGCGCCC TTCC GGGCGCGT TTTTCTTTGGGCGAA TERM 986 1973396 - 1973413 + T 100 -14.1 -5.27335 | opp_overlap 1973395 1973396, overlap 1973390 TCATCGACAGGAAAG CGCGCCC TTCC GGGCGCG TTTTTCTTTGGGCGA RSP_0250 1974531 - 1973791 - | hypothetical protein TERM 987 1974645 - 1974613 - R 95 -14.8 -4.13282 | overlap 1974618 AGCACACTCCGAAAA GGAAACGGGGCCGG ACTGG CCGACCCCGTGCCC CGCAGGAAGGAAAGT TERM 988 1974640 - 1974618 - R 93 -14.1 -4.20136 | overlap 1974613 ACTCCGAAAAGGAAA CGGGGCCGG ACTGG CCGACCCCG TGCCCCGCAGGAAGG RSP_0251 1976062 - 1974662 - | Outer membrane efflux protein RSP_0252 1976763 - 1976110 - | protein-L-isoaspartate carboxylmethyltransferase RSP_0253 1976931 - 1978313 + | glycine/D-amino acid oxidase (deaminating) TERM 989 1978339 - 1978300 - T 82 -20 -2.62184 | opp_overlap 1978300 1978331 CCCTGGGCCACAGGA TCGCGGGGCGCTGACCGG CAGC CCGGTCAGCGCCGCAGGA TCAGACCGCCCGCGG dxsA 1980286 - 1978340 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 990 1980340 - 1980311 - R 95 -15.7 -4.19238 | overlap 1980312 CCGTGAATGTCAAAA GGGTGCCGTGCGG TCTT CCACACGGCACCA GGTCCCTGTCGCCAA TERM 991 1980339 - 1980312 - R 86 -19.2 -3.11222 | overlap 1980311 CGTGAATGTCAAAAG GGTGCCGTGCGG TCTT CCACACGGCACC AGGTCCCTGTCGCCA pufX 1980708 - 1980460 - | Intrinsic membrane pufX protien pufM 1981647 - 1980721 - | photosynthetic reaction center subunit M TERM 992 1981237 - 1981198 - G 70 -14.2 -3.2614 | opp_overlap 1981198 GATGGCCGAGAGGAA CGCCCAGGCGGTGTGCTT GCCC ATGCCCAGCGCCTGAGCG CGGAGATAGGTGCGG pufL 1982488 - 1981640 - | PufL, photosynthetic reaction center L subunit pufA 1982788 - 1982612 - | LHI alpha, light-harvesting B875 protein pufB 1982951 - 1982802 - | LHI beta, light-harvesting B875 subunit pufK 1983015 - 1982953 - | transcriptional regulatory protein pufK pufQ 1983315 - 1983082 - | protein pufQ bchZ 1984787 - 1983312 - | putative chlorophyllide reductase, BchZ subunit bchY 1986295 - 1984787 - | chlorophyllide reductase, BchY subunit bchX 1987372 - 1986371 - | chlorophyllide reductase, BchX subunit bchC 1988325 - 1987369 - | chlorophyll synthesis pathway, bchC crtF 1989617 - 1988478 - | hydroxyneurosporene-O-methyltransferase crtE 1990536 - 1989670 - | farnesyl-diphosphate synthase crtD 1990681 - 1992168 + | methoxyneurosporene dehydrogenase ctrC 1992234 - 1993073 + | hydroxyneurosporene synthase TERM 993 1993213 - 1993189 - T 100 -15 -4.41047 | gap 1, opp_overlap 1993189 1993186 1993184 1993181, overlap 1993159 ACCCCGGAAGCAAAA GGGGCGGCGCC CGCA GGC-CCGCCCC TCCTCTATTCTGCCC TERM 994 1993189 - 1993213 + T 70 -15 -2.78526 | gap 1, opp_overlap 1993159 1993189, overlap 1993186 1993184 1993181 ACCCCGGAAGCAAAA GGGGCGGCGCC CGCA GGC-CCGCCCC TCCTCTATTCTGCCC tspO 1993710 - 1993234 - | tryptophan rich sensory protein crtB 1994809 - 1993742 - | phytoene synthase crtI 1996362 - 1994806 - | phytoene dehydrogenase crtA 1996520 - 1997494 + | spheroidene monooxygenase TERM 995 1997842 - 1997798 - g 85 -19.2 -3.08679 | gap 1 CGGCGTGACGGAAGA CCGTGTG-GTGGGCGCGCTCG ACAT CGAGCGCGCCCTCACCCGCGG CGAAAAGGCCTTCGA bchI 1997499 - 1998503 + | magnesium chelatase subunit I bchD 1998500 - 2000194 + | magnesium chelatase subunit D bchO 2000197 - 2001063 + | magnesium-chelatase, BchO TERM 996 2001199 - 2001181 - T 71 -11 -3.5393 | overlap 2001182 ACGACCTCTTGCAAA CGCAGACC GGC GGTCTGCA AGCCTTCGGCGCCGG TERM 997 2001295 - 2001262 - T 100 -19.7 -3.41878 | opp_overlap 2001262 2001261 2001265 2001267, overlap 2001267 CCTTGCAAGCCACAA GAAAAGGGCGGCTCC CGCA GGAACCGCCCTCTTC GTTGCTCTTCCGGCG TERM 998 2001267 - 2001290 + T 74 -13.8 -3.29558 | opp_overlap 2001262 2001267, overlap 2001265 2001262 2001261 CAAGCCACAAGAAAA GGGCGGCTCC CGCA GGAACCGCCC TCTTCGTTGCTCTTC TERM 999 2001290 - 2001267 - T 100 -16 -4.80959 | opp_overlap 2001267 2001265 2001262 2001261, overlap 2001262 CAAGCCACAAGAAAA GGGCGGCTCC CGCA GGAACCGCCC TCTTCGTTGCTCTTC RSP_0276 2001845 - 2001312 - | isopentenyl-diphosphate delta-isomerase bchP 2003032 - 2001848 - | geranylgeranyl hydrogenase RSP_0278 2004318 - 2003035 - | putative light-harvesting 1 (B870) complex assembly protein PucC bchG 2005223 - 2004315 - | bacteriochlorophyll/chlorophyll a synthase TERM 1000 2004781 - 2004745 - G 73 -14.3 -3.33696 | GCGCCCGTGAACCAA GGCAGGCCCTCGTAGCA GAG CGCGACGAGGCCCGGCC CCCACCAGCCCGACC bchJ 2005917 - 2005297 - | bacteriochlorophyll synthase, 23 kDa subunit (bchJ) TERM 1001 2005454 - 2005399 - G 70 -12.7 -3.30441 | gap 3, opp_overlap 2005404, overlap 2005402 GACGAGGCGCGAGAA GAG-GCGCTCGAACACCGCCGC-GTGCC AGT GGCACAACGG-GGTGTCCGAGCTTTCTC CGGCGACCACGGGGT TERM 1002 2005404 - 2005448 + g 90 -15.8 -3.85698 | opp_overlap 2005402 2005399 GGCGCGAGAAGAGGC GCTCGAACACCGCCG-CGTGCC AGT GGCACAACGG-GGTGTCCGAGC TTTCTCCGGCGACCA bchE 2007762 - 2005924 - | magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(bchE) TERM 1003 2006763 - 2006779 + g 70 -9.4 -3.78934 | overlap 2006752 TGTCGGCCTCGCGCA GGAGGC GGATG GCCTCC TTGTTCTCGGCCACC TERM 1004 2007508 - 2007451 - G 70 -13.3 -3.36273 | gap 1, opp_overlap 2007505 CTGCCGGAACATGAA GGTGGCG-TGGATGCCGCCCAGCACGCG CAG CGCGTTCGGCACGACCTCCATCGCGACC TTCAGGGTCTCTTCG ppsR 2009304 - 2007910 - | transcriptional regulator PpsR ppaA 2010157 - 2009363 - | regulatory protein, PpaA bchF 2010530 - 2011012 + | 2-vinyl bacteriochlorophyllide hydratase bchN 2011009 - 2012295 + | light-independent protochlorophyllide reductase subunit N bchB 2012366 - 2013970 + | light-independent protochlorophyllide reductase subunit B TERM 1005 2015565 - 2015543 - g 79 -16.2 -3.39327 | opp_overlap 2015550 2015552 TGCCGACATCGAGAA GGCCTGGGGC GCC GCCCCCGGCC GCATCCAGTCGGACG TERM 1006 2015550 - 2015591 + G 80 -17.9 -2.94099 | opp_overlap 2015543, overlap 2015552 ATCGAGAAGGCCTGG GGCGCCGCCCCCGGCCG CATCCAGT CGGACGGGCGCGGCGTC TATATCCTCGGCCAG TERM 1007 2015552 - 2015589 + G 79 -16.9 -3.02471 | opp_overlap 2015543, overlap 2015550 CGAGAAGGCCTGGGG CGCCGCCCCCGGCCG CATCCAGT CGGACGGGCGCGGCG TCTATATCCTCGGCC bchH 2013960 - 2017541 + | magnesium chelatase subunit H TERM 1008 2017555 - 2017581 + F 74 -12.2 -3.57144 | opp_overlap 2017514 GAAGCGGACGGGACG GCAAGCCCTGCG GGA CGCAGGGATGGC TTTAGCAATGGGGGG chlL 2017603 - 2018496 + | protochlorophyllide reductase iron-sulfur ATP-binding protein bchM 2018540 - 2019208 + | Mg-protoporphyrin IX methyl transferase RSP_0290 2019205 - 2020644 + | light-harvesting 1 (B870) complex assembly puhA 2020663 - 2021445 + | reaction centre H protein RSP_0292 2021573 - 2022217 + | hypothetical protein RSP_0293 2022294 - 2022758 + | hypothetical protein RSP_6110 2022780 - 2023076 + | hypothetical protein RSP_0294 2023073 - 2024164 + | magnesium-protoporphyrin IX monomethyl ester cyclase RSP_0295 2024226 - 2025098 + | hypothetical protein cycA 2025438 - 2025875 + | cytochrome c2 TERM 1009 2025899 - 2025922 + T 100 -18.2 -4.05446 | CGACGCGCATTCGAA GGCCGGCAGA GCGA TCTGCCGGCC TTTCTCGTTCCAGCC RSP_0297 2026979 - 2026281 - | ABC branched chain amino acid transporter, ATPase subunit RSP_0298 2027719 - 2026976 - | ABC branched chain amino acid transporter, ATPase subunit RSP_0299 2028948 - 2027716 - | ABC branched chain amino acid transporter, inner membrane subunit RSP_0300 2031243 - 2029315 - | ABC branched chain amino acid transporter, inner membrane subunit TERM 1010 2030183 - 2030163 - G 72 -3.8 -4.56702 | overlap 2030164 CCGCAAGGAAATAAA TCGAGGCC AGCGA GGCCGCGT CGAGGGCGAGGTCGG TERM 1011 2030839 - 2030823 - G 71 -15.1 -3.07816 | GGGCGATGGAGGCAA GCGCCGC CGA GCGGCGC GCGGGATCGGGATCG TERM 1012 2031255 - 2031310 + r 70 -15.2 -2.75957 | gap 1 GCATTCGGACCTCGT CGGAGGGAGCGGGGGCGGCGTCGGACC TGC GGCCCGG-GCCGCCCCCGTCACGTCAG TAGTTCGACTTGATC RSP_0301 2032587 - 2031307 - | ABC branched chain amino acid transporter, substrate binding protein TERM 1013 2032819 - 2032803 - R 76 -2.9 -4.72272 | overlap 2032817 GGGCGCCATGAAAAA CGCCGAA AAA TTCATCG GATCACGGGCTCGCG ureG 2033510 - 2032887 - | urease accessory protein G TERM 1014 2033415 - 2033439 + g 71 -7 -4.18494 | GACCGCCATCGAGCA GCGATGCGCG AGCGC CGCGCAGAGC TTTTCGGTCAGGGTC ureF 2034139 - 2033507 - | urease accessory protein UreF ureE 2034684 - 2034136 - | urease accessory protein UreE RSP_0305 2035100 - 2034681 - | hypothetical protein ureC 2036808 - 2035102 - | urease subunit alpha RSP_0306 2036968 - 2037840 + | class I diheme cytochrome c RSP_0307 2038213 - 2037896 - | antifreeze protein, type I ureB 2038543 - 2038238 - | urease subunit beta ureA 2038896 - 2038594 - | urease subunit gamma ureD 2039735 - 2038908 - | urease accessory protein UreD RSP_0311 2039862 - 2040977 + | putative aminotransferase protein TERM 1015 2041108 - 2041125 + G 77 -10.5 -4.07568 | overlap 2041081 CGGCAGGCGCTTCTG GGGCCGG CCTA CCGGCTC TTTTACGAGCGGCCC TERM 1016 2042082 - 2042106 + G 75 -11.3 -3.87815 | CCGGGATCCGCGGCT GGGGGCCGTGC GCG GCGCGGGCCTC TTTCTCGGCGTCGAG RSP_0312 2041012 - 2042322 + | aminotransferase RSP_0313 2042383 - 2042757 + | hypothetical protein TERM 1017 2042790 - 2042771 - g 76 -9.2 -4.18934 | GACGATCTGAACAAA GTCTGGCC GAGC GGCCTGAC CGTTGCCGAAGCCGA pucB 2042750 - 2042905 + | LHII beta, light-harvesting B800/850 protein pucA 2042921 - 2043085 + | LHII alpha, light-harvesting B800/850 protein pucC 2043280 - 2044659 + | light-harvesting 1 (B870) complex assembly TERM 1018 2044689 - 2044667 - f 70 -14.8 -2.77899 | overlap 2044664 GCCTGTGACGAATCA CCGGGCACGC CCT GCGTGCCCGC TTCCCGGAGGTGCAA RSP_0316 2045159 - 2045800 + | LuxR family transcriptional regulator TERM 1019 2045809 - 2045847 + T 100 -24.7 -3.53444 | gap 1, opp_overlap 2045787 CTCCTGAGCCGGAGC GGCGGATGCCCCGGCCCC CTCG GGGGCCGGGGCATT-GCC TTTCACGAGGCCTGC hemN 2047208 - 2045850 - | coproporphyrinogen III oxidase RSP_0318 2047977 - 2047282 - | hypothetical protein RSP_0319 2048195 - 2047974 - | NnrU NnrT 2048365 - 2048192 - | hypothetical protein norD 2050241 - 2048367 - | NorD nitric oxide reductase activation protein norQ 2051043 - 2050246 - | NorQ protein required for nitric oxide reductase activity TERM 1020 2050927 - 2050956 + g 75 -14.3 -3.53012 | opp_overlap 2050944, overlap 2050912 2050953 GGTCTTGCCGCAGCC GGTCGGCCCTTTC AGAA GAAGGGGCAGACC TTTCCGGGAGGCAGC norB 2052380 - 2051040 - | nitric oxide reductase large subunit, cytochrome b norC 2052846 - 2052394 - | nitric oxide reductase subunit C, cytochrome c RSP_0325 2052996 - 2053202 + | hypothetical protein RSP_0326 2053376 - 2053912 + | hypothetical protein nnrR 2054621 - 2053920 - | Crp/FNR family transcriptional regulator nnrS 2054833 - 2056026 + | hypothetical protein RSP_0329 2056160 - 2057170 + | diguanylate cyclase with GAF sensor RSP_0330 2057590 - 2057186 - | hypothetical protein RSP_0331 2059451 - 2057613 - | hypothetical protein RSP_0332 2061625 - 2059448 - | cellulose synthase RSP_0333 2063991 - 2061625 - | cellulose synthase TERM 1021 2063018 - 2062990 - G 72 -13.2 -3.53012 | gap 2 GGTCTCGCCGGCAAA GCCGCC-CG-CCTC GTC GAGGGCGCGGCGGC GCAGGACCGCGGCCG TERM 1022 2063070 - 2063047 - G 76 -11.6 -3.79906 | opp_overlap 2063053 CGATCCGCAGAAGAA GGCCCCGCCC CAGC GGTCGAGGCC GCGGTGGATCTTGCC RSP_0334 2064696 - 2064025 - | hypothetical protein RSP_0335 2065080 - 2067449 + | diguanylate cyclase/phosphodiesterase RSP_0337 2068360 - 2067539 - | phospodiesterase RSP_0338 2069274 - 2068357 - | hypothetical protein RSP_0339 2069918 - 2069349 - | hypothetical protein RSP_0340 2071101 - 2070079 - | hypothetical protein RSP_0341 2072568 - 2071291 - | cytosine deaminase TERM 1023 2071350 - 2071369 + g 70 -12.8 -3.28712 | TCCCCGGCAGGCTCA GGCGCGCG TCGT TGCGCGCC TTCTCCGACACCACC RSP_0342 2073515 - 2072568 - | putative ABC sugar transporter, inner membrane subunit TERM 1024 2072786 - 2072753 - G 76 -12.3 -3.81755 | gap 1 AGGCGGCAAAGAGAA GCGCGCCGAGCACGGC CTT GCCGGGC-CGCCACGC GCCGAAGACCACGAG RSP_0343 2074650 - 2073607 - | putative ABC sugar transporter, inner membrane subunit RSP_0344 2076160 - 2074640 - | putative ABC sugar transporter, fused ATPase subunits RSP_0345 2077161 - 2076157 - | ABC transporter periplasmic-binding protein TERM 1025 2078499 - 2078481 - g 72 -11.6 -3.66018 | opp_overlap 2078474 GCAGGAGGCCAACAA GGCGGCCG TGA CGGCCGGC TGGGATGGTGTGGTC RSP_0346 2077432 - 2078532 + | ABC transporter, substrate binding protein RSP_0347 2078687 - 2079568 + | ABC transporter, inner membrane subunit RSP_0348 2079565 - 2080356 + | ABC transporter, inner membrane subunit TERM 1026 2080712 - 2080657 - g 70 -13.1 -3.28924 | gap 1, opp_overlap 2080677 GACCGTCGCGCAGAA CGTGGGCTTCGGCCTCAGGGTCGCGG GCGTG CCGCG-CCGCGAGGCCGAGGAGCGCG TGGCCGAGATGCTCT RSP_0349 2080373 - 2081431 + | ABC transporter, ATPase subunit RSP_0350 2081485 - 2081925 + | hypothetical protein RSP_0351 2081929 - 2082993 + | D-threo-aldose 1-dehydrogenase TERM 1027 2083087 - 2083145 + T 95 -26 -2.80443 | gap 1, overlap 2083144 GTTGACGCGGGGCGG CTCC-CTTCGCGGCGGCGGCAGCGGCA AGTCCC TGCCGCTGCCGCCGCCGGGCCGAGGGG TCTGATCAGATCTGC RSP_0352 2083474 - 2083151 - | ferredoxin RSP_0354 2084288 - 2084740 + | hypothetical protein RSP_0355 2086276 - 2084795 - | serine protease RSP_0356 2087451 - 2086429 - | HflC protein RSP_0357 2088632 - 2087451 - | HflK protein gor 2090046 - 2088688 - | NADPH-glutathione reductase cbbI 2090839 - 2090051 - | ribose-5-phosphate isomerase RSP_0360 2091206 - 2090868 - | hypothetical protein TERM 1028 2091377 - 2091433 + H 74 -15.2 -3.08508 | opp_overlap 2091371 2091423, overlap 2091371 2091379 2091424 CTGAAGACAGCAGCG CATGGC-CCGGCTTTCTCGTCCGCCCGC GAG GTGGATGG-CGCGAAAGGCGGCGCCATG TCGTTTTCCGCCATG sda 2091503 - 2092882 + | L-serine ammonia-lyase TERM 1029 2093145 - 2093167 + G 90 -16.2 -4.14013 | opp_overlap 2093113, overlap 2093162 CGTTCACGGCTTCCT CCCGCCGGCC CAT GGCCGCCGGG TTTTCCCGCCTTTTC RSP_0362 2092899 - 2093255 + | hypothetical protein RSP_0363 2094815 - 2094117 - | hypothetical protein RSP_0364 2093252 - 2094175 + | RarD family protein RSP_0365 2095748 - 2094867 - | hypothetical protein RSP_6113 2096093 - 2095851 - | hypothetical protein TERM 1030 2096168 - 2096138 - R 70 -12.5 -3.25823 | gap 1, overlap 2096122 2096142 CCGTCCCGACAGGAA GCGACAGCCGCCCC GTGC GGGGCGGCCGG-GC CGGATCAGTCCTCGA TERM 1031 2096165 - 2096142 - R 77 -17.4 -2.58714 | overlap 2096122 2096138 CCCGACAGGAAGCGA CAGCCGCCCC GTGC GGGGCGGCCG GGCCGGATCAGTCCT RSP_0366 2097465 - 2096173 - | adenylosuccinate synthetase TERM 1032 2097567 - 2097623 + H 86 -14.2 -3.8211 | gap 1, opp_overlap 2097528, overlap 2097569 CCGCCGCAAGCGGGC GCGACCTGCGACCGCATCTGCCGCGCC GCGG GGGGCGGC-GACCCGGGCGCAGGGCTC TTCTTCTCGATCCGG TERM 1033 2097569 - 2097621 + H 82 -15.4 -3.49568 | gap 1, opp_overlap 2097528, overlap 2097567 GCCGCAAGCGGGCGC GACCTGCGACCGCATCTGCCGCGCC GCGG GGGGCGGC-GACCCGGGCGCAGGGC TCTTCTTCTCGATCC TERM 1034 2098200 - 2098154 - g 81 -18 -3.05384 | overlap 2098137 2098185 2098199 GCCCCGGCGACGGAA GCTCCGGCCACCGAAGCTCCCG CGA CGGAAACTCCGGCGACGGAAGC CCCTGCTGCCGAAAC secG 2097776 - 2098402 + | preprotein translocase subunit SecG RSP_0368 2098565 - 2100208 + | CTP synthetase RSP_0369 2100387 - 2101169 + | hypothetical protein RSP_0370 2101250 - 2101687 + | hypothetical protein RSP_0371 2101851 - 2102648 + | ABC basic amino acid transporter, ATPase subunit RSP_0372 2102691 - 2103416 + | ABC basic amino acid transporter, solute-binding protein TERM 1035 2103450 - 2103423 - f 95 -18.4 -3.64822 | opp_overlap 2103417 ACCTTCTGATCGAAA GGAGGAGGGCCC CGCG GGGCCCTCCGCC CGCCCATGTTCGCAA RSP_0373 2103456 - 2104337 + | ABC basic amino acid transporter, inner membrane subunit TERM 1036 2104383 - 2104410 + G 75 -12.6 -3.59262 | TGCGCTCGCTGGGCC TCGGCGAGCGGC TGCT GCCGCGCACCGA TTTCACGCTCTGCCA TERM 1037 2104671 - 2104718 + G 73 -11.3 -3.83318 | gap 2 ACCTCTGGGGGATCA CGGTCGAGACCGCCTGGCTCACG CGGG CGTGGGCC-GGCGCGCT-GATCG TTCTCTTCTTCAACA RSP_0374 2104334 - 2105161 + | ABC basic amino acid transporter, inner membrane subunit RSP_0375 2105166 - 2106503 + | L-glutamine synthetase RSP_0376 2106563 - 2107240 + | glutamine amidotransferase class-I RSP_0377 2107245 - 2108600 + | L-glutamine synthetase RSP_0378 2108597 - 2109898 + | hypothetical protein RSP_0379 2110203 - 2111570 + | aminotransferase TERM 1038 2111589 - 2111614 + T 100 -20.5 -4.74103 | opp_overlap 2111589 CCCGCATGAGGGAAA GGGCTCCGCAG TCGC CTGCGGAGCCC TTTTTCACTTGCGCC TERM 1039 2111614 - 2111589 - T 100 -20.5 -3.68351 | opp_overlap 2111589 CCCGCATGAGGGAAA GGGCTCCGCAG TCGC CTGCGGAGCCC TTTTTCACTTGCGCC RSP_0380 2112187 - 2111633 - | hypothetical protein TERM 1040 2112189 - 2112201 + r 81 -3.3 -4.84359 | TCAGTCTCGGCCATA CCCAC CCC GTCGG TTTTTCTGCGGCTGC TERM 1041 2112271 - 2112251 - R 100 -18.3 -4.91852 | TCGATCAAAAAGAAA GGGCGGGCT GAC AGCCCGCCC CGCGCATCCGCCCTG RSP_0381 2112763 - 2112314 - | hypothetical protein TERM 1042 2112494 - 2112524 + g 79 -16.1 -3.38207 | CTCGGCGGCCATCTC GGCAGCGGCCGAC GCGAA GTCGGTCGCGGCC TTGGTGTATTCGGTC TERM 1043 2112820 - 2112862 + r 84 -4.9 -5.02074 | opp_overlap 2112820, overlap 2112850 TGACAAGGATATAAA TGCTGCGCCGCAGAA AATCAACCGCTCA TTCTGCACCGCAGCA TTTTTTCGCACCTGG TERM 1044 2112862 - 2112820 - R 75 -8.5 -4.15657 | gap 1, opp_overlap 2112820 2112850 TGACAAGGATATAAA TGCTGCGCCGCAGAA-AATC AACC GCTCATTCTGCACCGCAGCA TTTTTTCGCACCTGG RSP_0382 2114722 - 2112917 - | poly-beta-hydroxybutyrate polymerase TERM 1045 2114237 - 2114227 - G 72 -5.4 -4.36914 | TCGTGGGCGAGAAAA GATC GAC GATC TGGCGCGAGAAATAT RSP_0383 2114824 - 2116095 + | hypothetical protein TERM 1046 2116113 - 2116130 + T 78 -14.1 -3.66178 | opp_overlap 2116113 CGCCTCAAACAAGAA GGGCGCC GCGA GGCGCCC TTTCCCGTTCCGGCA TERM 1047 2116130 - 2116113 - T 90 -14.1 -4.08557 | opp_overlap 2116113 CGCCTCAAACAAGAA GGGCGCC GCGA GGCGCCC TTTCCCGTTCCGGCA RSP_0384 2116927 - 2116163 - | hypothetical protein TERM 1048 2118084 - 2118071 - g 72 -5.9 -4.42639 | ACATGCCAAGGAAAA GCGCA TCAA CGCGC TGAAGCCGATGAACT RSP_0385 2117070 - 2119010 + | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase TERM 1049 2119090 - 2119130 + F 79 -11.6 -4.07568 | GTCCTGCACGCGCCC GGCCCCGCGGTCCGGCCG CTCCC CCGCCGGGCCGGAGGACC TTTTGCCCGCGCGCG RSP_0386 2119520 - 2119726 + | cold-shock DNA-binding protein family protein RSP_0387 2120113 - 2119787 - | hypothetical protein RSP_0388 2120584 - 2120180 - | hypothetical protein folA 2121097 - 2120618 - | dihydrofolate reductase RSP_0390 2121993 - 2121097 - | thymidylate synthase RSP_0392 2122280 - 2122708 + | lactoylglutathione lyase RSP_0393 2123940 - 2122870 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 1050 2123507 - 2123538 + g 82 -13.8 -3.85698 | gap 1, overlap 2123508 GTGGCCGCGAGCTTC AGCGTGA-CGAAGGG CAG CCCTTCGGTCACGCG TTTCTGGAAGCCCGC TERM 1051 2123508 - 2123537 + g 77 -17.3 -2.91276 | gap 1, overlap 2123507 TGGCCGCGAGCTTCA GCGTGA-CGAAGGG CAG CCCTTCGGTCACGC GTTTCTGGAAGCCCG RSP_0394 2124422 - 2123955 - | transcriptional regulator NrdR RSP_0396 2125024 - 2124644 - | hypothetical protein rpoD 2127042 - 2125036 - | RNA polymerase sigma factor RpoD dnaG 2129078 - 2127147 - | DNA primase RSP_0398 2130628 - 2129201 - | dehydrogenase TERM 1052 2130756 - 2130730 - H 90 -13.7 -4.08216 | gap 1 TCACGTCGGCGAAAA GCGGCGGCCCGG CGCG CCA-GCCGCCGC CGCTCCGCGCGGAGG RSP_0399 2130992 - 2132692 + | hypothetical protein RSP_0400 2132689 - 2133246 + | hypothetical protein RSP_0401 2133250 - 2133786 + | hypothetical protein TERM 1053 2133864 - 2133806 - T 70 -15.2 -2.82327 | gap 1, opp_overlap 2133834, overlap 2133805 GGGGCAGAGGGAAAG CCCCGGCCC-TCGCCCGCCGAGCCG GACCCCTCGA CGGCTCGGCGCTCACCGGGCCGAGG CGGTCTTCAGCACCA RSP_0402 2134441 - 2133851 - | TetR family transcriptional regulator RSP_0403 2134939 - 2136225 + | homoserine dehydrogenase glpX 2136288 - 2137253 + | fructose 1,6-bisphosphatase II RSP_0405 2137250 - 2139001 + | single-stranded DNA-specific exonuclease RSP_0406 2140256 - 2139213 - | periplasmic sensor diguanylate cyclase (GGDEF) RSP_0407 2141464 - 2140469 - | D-lactate dehydrogenase TERM 1054 2140901 - 2140888 - G 74 -9.5 -4.07568 | CGGCCTCGGCGAAAA GCCGC TCGA GCGGC ACATAGGTCACGCCG RSP_0408 2141667 - 2142605 + | hypothetical protein RSP_0409 2142602 - 2143480 + | hypothetical protein RSP_0410 2144508 - 2143501 - | sensor diguanylate cyclase (GGDEF) RSP_6114 2145095 - 2144508 - | hypothetical protein RSP_0411 2146880 - 2145159 - | hypothetical protein TERM 1055 2146988 - 2146964 - R 74 -13.5 -3.30159 | GGAAGCGGCCCAGAA GCCGCAGGAGC CGG GCTCCCGAGGC GGAGGGCCTGCCGTC RSP_0412 2147694 - 2147002 - | putative phosphatase RSP_6115 2148028 - 2147750 - | hypothetical protein RSP_0413 2148157 - 2149542 + | response regulator receiver modulated diguanylate cyclase RSP_0414 2150231 - 2149704 - | hypothetical protein RSP_6227 2150592 - 2150233 - | hypothetical protein TERM 1056 2150580 - 2150568 - G 72 -3.4 -4.56597 | GCGCTTCGGCAAAAA GATC GTCCA GATC GCGGTCGCGCATCTC RSP_0415 2151187 - 2150594 - | RNA polymerase sigma factor RSP_0416 2151920 - 2151264 - | calcium-binding EF-hand domain-containing protein RSP_0418 2152121 - 2152531 + | hypothetical protein TERM 1057 2152894 - 2152937 + GT 74 -11.7 -3.71848 | gap 2, overlap 2152893 2152912 TGCGCTTCGTCTTCC GCGC-CATCACGCCGCC-CGG CCGC CCGCGGCGGTTCGATGCGCGC TTCTTCGTGGCGGAG RSP_0419 2152500 - 2153177 + | hypothetical protein RSP_0420 2153620 - 2153246 - | hypothetical protein RSP_0421 2154136 - 2153636 - | hypothetical protein RSP_0422 2154570 - 2154124 - | hypothetical protein RSP_0423 2155689 - 2154649 - | aldo/keto reductase RSP_0424 2155955 - 2156563 + | hypothetical protein TERM 1058 2157452 - 2157475 + G 72 -5.2 -4.45485 | GCAAGGGCAGCGAAC CCTGGCCC GGCATGGA GGGCAAGG TTTTCTACGTCTGGT metG 2156707 - 2158425 + | methionyl-tRNA synthetase RSP_0426 2161199 - 2158701 - | Na+/H+ antiporter RSP_0427 2161602 - 2161273 - | hypothetical protein TERM 1059 2161681 - 2161655 - R 83 -5.1 -4.86293 | CAATAAAAATTAAAA TCGGCTAGCGC GACAT ACATTAGCCGA GGTTCCCGATCTCTT TERM 1060 2161917 - 2161929 + r 75 -4.7 -4.56597 | overlap 2161918 TCGAGCGGCGGGGGA CGCGC GGA GCGCC TTTTTCGCAGGCAGG RSP_0428 2163268 - 2161946 - | hypothetical protein TERM 1061 2164194 - 2164230 + G 75 -13.8 -3.49475 | gap 1, opp_overlap 2164193 2164192 CGCAGAACTACAACC TCGA-TTTCCGCCGCAC GCCC GAGCGGCGGGAACTCGA TTATATCCGCGTGAC RSP_0429 2163545 - 2165401 + | multidrug ABC transporter ATP-binding protein RSP_6228 2165645 - 2165424 - | hypothetical protein cobD 2165851 - 2166786 + | adenosylcobinamide-phosphate synthase TERM 1062 2166976 - 2167005 + T 72 -15.7 -2.9155 | gap 1, opp_overlap 2166965, overlap 2166972 GGAAGGCCCCTGCCC GCTCCGCCGCCGGC CGC GCC-GCGGCGGAGG TCTGCTCTTCAGCCG RSP_0431 2168234 - 2167014 - | putative selenocysteine lyase RSP_0432 2168822 - 2168244 - | hypothetical protein RSP_0433 2169298 - 2168819 - | hypothetical protein TERM 1063 2168991 - 2168975 - G 78 -11.5 -3.88291 | CAGCAGCGCGAGAAA GAGCGCG AGC CGCGCCC CGAAGAAGCTGCCCT TERM 1064 2169217 - 2169178 - G 72 -15.8 -2.79321 | gap 1, opp_overlap 2169177 2169180, overlap 2169173 GCGACACGAAGATCA GCAGGCAG-GCGCCCATCA GGA TGATGAGCGCCCTGCCCTC GTTCTCACCGGCATC SufC 2171340 - 2170582 - | SUF C, ATPase RSP_0439 2171661 - 2171350 - | hypothetical protein sufB 2173237 - 2171696 - | cysteine desulfurase activator complex subunit SufB RSP_0442 2174359 - 2173313 - | putative aminotransferase RSP_0443 2174909 - 2174442 - | BadM/Rrf2 family transcriptional regulator RSP_0444 2175063 - 2175722 + | hypothetical protein RSP_0445 2175719 - 2176303 + | hypothetical protein RSP_0446 2176388 - 2177602 + | isocitrate dehydrogenase TERM 1065 2177634 - 2177608 - f 78 -16.5 -3.05384 | opp_overlap 2177598 2177597 CGGCGCCTGAGCGAA GGCCGGGGGGC TGTCT GCCCCCCGGAC CCCCCGAGGATATTT RSP_0447 2177913 - 2178515 + | hypothetical protein TERM 1066 2180280 - 2180244 - g 80 -9.4 -4.20918 | gap 2, overlap 2180252 CTGAAGGGCAAGAAA CTCACCAACGTCCGCGCC TCG GGCACGGACGA-GGCG-G TGCGCCTCACCCCGC TERM 1067 2180274 - 2180252 - g 80 -17 -3.27617 | overlap 2180244 CAAGAAACTCACCAA CGTCCGCGCC TCG GGCACGGACG AGGCGGTGCGCCTCA RSP_0448 2178615 - 2180435 + | EF-Tu; elongation factor Tu TERM 1068 2180459 - 2180441 - T 70 -13.1 -3.28745 | opp_overlap 2180441, overlap 2180436 CGCGGAATAAGCGAA GGGCGCC CCTGC GGCGCCC TTTTCCATTCCGGTG TERM 1069 2180441 - 2180459 + T 88 -13.1 -4.2803 | opp_overlap 2180441 2180436 CGCGGAATAAGCGAA GGGCGCC CCTGC GGCGCCC TTTTCCATTCCGGTG RSP_0449 2181275 - 2180481 - | putative glutamine amidotransferase RSP_0450 2181721 - 2181431 - | hypothetical protein alaS 2184374 - 2181723 - | alanyl-tRNA synthetase recA 2185534 - 2184461 - | recombinase A RSP_0453 2185729 - 2186319 + | hypothetical protein RSP_0454 2188623 - 2186323 - | multisensor hybrid histidine kinase RSP_0455 2189886 - 2188723 - | NOL1/NOP2/sun family protein TERM 1070 2189299 - 2189335 + g 74 -7.2 -4.21275 | gap 1, overlap 2189332 CAGCTCGACCCGCCC CTCGCGATAGGCGGCGG AGGC CTGCAGTCTG-CGCGGG TTTTCCGTCACTTCG glpR 2189977 - 2190756 + | glycerol-3-phosphate regulon repressor RSP_0456 2191436 - 2190753 - | hypothetical protein TERM 1071 2191127 - 2191095 - G 70 -14.1 -3.14132 | CGTGGCCGCCATGAA GCGCCCATGGTGGTG AGC CACCTCGATGAGCGC GGTCTCGAGCGTCTC RSP_0458 2191854 - 2191438 - | hypothetical protein RSP_0459 2192148 - 2193230 + | hypothetical protein RSP_0460 2196765 - 2193574 - | AcrB/AcrD/AcrF family cation/multidrug efflux pump RSP_0461 2197711 - 2196758 - | multidrug/cation efflux pump RSP_0462 2197833 - 2198087 + | hypothetical protein RSP_0463 2199037 - 2198150 - | cation efflux transporter TERM 1072 2199107 - 2199081 - R 79 -15.1 -3.35371 | overlap 2199082 GACAGCCTGAACGAA CGCGGCCGCCT TTTCG AGGCGGCCGCT CTAGCAGGATTCGGG TERM 1073 2199106 - 2199082 - R 79 -18.6 -2.60901 | overlap 2199081 ACAGCCTGAACGAAC GCGGCCGCCT TTTCG AGGCGGCCGC TCTAGCAGGATTCGG RSP_0464 2200064 - 2199168 - | putative protease RSP_0465 2201049 - 2200069 - | putative protease RSP_0466 2201573 - 2201049 - | hypothetical protein TERM 1074 2201556 - 2201525 - G 71 -9.2 -4.07568 | GCGGCTTCGGCAAAA GCCCCACCAGCCGC GAAA GCGGCGGGGCGAGC GTGGGCAGACTGGTC ubiD 2201698 - 2203191 + | 3-octaprenyl-4hydroxybenzoate decarboxylase RSP_0468 2203188 - 2203742 + | putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RSP_0469 2205090 - 2203870 - | hypothetical protein RSP_0470 2206691 - 2205174 - | hypothetical protein TERM 1075 2206763 - 2206737 - H 78 -16.6 -3.05384 | opp_overlap 2206742, overlap 2206742 CCTGCCCGCAGCCAA GTCAAGGCGTCG CGC CGTCGCCTTGAC TGAAGTCAATGACGC RSP_6116 2206851 - 2207183 + | hypothetical protein RSP_0472 2207288 - 2208010 + | hypothetical protein RSP_0473 2208007 - 2209557 + | phospholipase-D family protein cycP 2209777 - 2210226 + | cytochrome c' RSP_0475 2210230 - 2210829 + | cytochrome b RSP_0476 2211519 - 2210875 - | L-fuculose-phosphate aldolase RSP_0477 2211874 - 2213370 + | hypothetical protein RSP_0478 2214538 - 2213501 - | putative lysyl-tRNA synthetase RSP_0479 2214640 - 2215206 + | elongation factor P TERM 1076 2215275 - 2215240 - T 91 -21.2 -3.01712 | opp_overlap 2215243 2215247, overlap 2215247 GCGCTGTCGCCAAGA TGCAGAAGGGGCGCCC CGCA GGGCGCCCCTTCCTCA TTCCGGGAGAAGGCT TERM 1077 2215243 - 2215272 + T 81 -19.3 -2.70932 | opp_overlap 2215240 2215247, overlap 2215247 CTGTCGCCAAGATGC AGAAGGGGCGCCC CGCA GGGCGCCCCTTCC TCATTCCGGGAGAAG TERM 1078 2215247 - 2215268 + T 89 -18.7 -3.27298 | opp_overlap 2215240 2215247, overlap 2215243 CGCCAAGATGCAGAA GGGGCGCCC CGCA GGGCGCCCC TTCCTCATTCCGGGA TERM 1079 2215268 - 2215247 - T 93 -18.7 -3.42503 | opp_overlap 2215247 2215243, overlap 2215240 CGCCAAGATGCAGAA GGGGCGCCC CGCA GGGCGCCCC TTCCTCATTCCGGGA uxuB 2216661 - 2215294 - | D-mannonate oxidoreductase RSP_0481 2217403 - 2216678 - | 2-deoxy-D-gluconate 3-dehydrogenase kduI 2218224 - 2217400 - | 5-keto-4-deoxyuronate isomerase TERM 1080 2218284 - 2218328 + r 76 -14.2 -3.53012 | gap 2, opp_overlap 2218278 2218279 CGACAGGAAGGGGAC GGCCCCGCAATGCTCCCGACGC CAT GCGGAGGG-GCCT-GCGGGGCC TTTCGGGAACGGGCG RSP_0483 2218668 - 2218366 - | hypothetical protein RSP_0484 2219956 - 2218676 - | TRAP dicarboxylate family transporter DctM subunit RSP_0485 2220504 - 2219959 - | TRAP dicarboxylate family transporter DctQ subunit TERM 1081 2220557 - 2220526 - R 100 -19.4 -4.15044 | CCTCGCCGGAAGAAA CGGACCCGCGGCGC CAGG GCATCGCGGGTCCG AATGTCAGGTCACTG RSP_0487 2221544 - 2220567 - | TRAP dicarboxylate family transporter DctP subunit uxaC 2222976 - 2221570 - | glucuronate isomerase TERM 1082 2223230 - 2223259 + G 73 -13.5 -3.30771 | overlap 2223216 GTCGCGCGGCAGTTC GGCGTCTCGCGCC AGCC GGTGCGCGATGCC TTCTACCGCCTGTCG RSP_0489 2223080 - 2223796 + | GntR family transcriptional regulator RSP_0490 2223935 - 2224687 + | 2-keto-3-deoxygluconate kinase hupT 2225114 - 2226445 + | hydrogen uptake histidine-kinase hupU 2226442 - 2227434 + | hydrogenase small subunit hupV 2227431 - 2228858 + | hydrogenase large subunit hypF 2229068 - 2231344 + | hydrogenase maturation factor F hupS 2231581 - 2232690 + | hydrogenase protein small subunit hupL 2232694 - 2234484 + | hydrogenase protein large subunit RSP_0497 2234496 - 2235071 + | HupE/UreJ accessory protein hupC 2235213 - 2235860 + | Ni, Fe hydrogenase I cytochrome b subunit TERM 1083 2235886 - 2235922 + F 100 -22.3 -3.30159 | opp_overlap 2235878, overlap 2235890 2235893 GGAGAATCTTTGGGC TCCGGAGGGGCGCGGCG CAA CGCCGCGCCCTTCTGCA TTCTGCAACGCTTAA TERM 1084 2235890 - 2235918 + F 95 -23.9 -2.59431 | opp_overlap 2235878, overlap 2235886 2235893 AATCTTTGGGCTCCG GAGGGGCGCGGCG CAA CGCCGCGCCCTTC TGCATTCTGCAACGC TERM 1085 2235893 - 2235915 + F 100 -22 -3.45054 | opp_overlap 2235878, overlap 2235890 2235886 CTTTGGGCTCCGGAG GGGCGCGGCG CAA CGCCGCGCCC TTCTGCATTCTGCAA hupD 2236151 - 2236771 + | HyaD peptidase RSP_0500 2236771 - 2237088 + | putative HupF/HypC hydrogenase protein hupG 2237085 - 2237471 + | HupG hydrogenase expression/formation protein hupH 2237483 - 2238301 + | HupH hydrogenase expression/formation protein hupJ 2238298 - 2239056 + | hypothetical protein hupK 2239053 - 2239865 + | HupK hypA 2239858 - 2240199 + | hydrogenase expression/synthesis, HypA family hypB 2240199 - 2241068 + | NI2+-binding GTPase protein HypB RSP_0507 2241068 - 2242543 + | HupR response regulator hypC 2242545 - 2242835 + | hydrogenase expression/formation protein HypC TERM 1086 2243126 - 2243156 + G 71 -14.6 -3.01712 | ACCACCTTCGGCGAT GCGATGCGCGTGCC GGG GGCGCGCGGCTCGC TCTTGCAGGCCAAGG hypD 2242832 - 2243971 + | hydrogenase isoenzyme formation protein HypD TERM 1087 2244283 - 2244315 + G 73 -15.5 -3.21099 | AACGATCTCGCGGTG GGCGGCGCAGAGCCG CTC TGGCTCTCGGCCGCC TTCATCATCGAGGAG TERM 1088 2244780 - 2244826 + G 100 -19.4 -4.03234 | GGAGGCGCTGCCGCT GCGGGCCGAGGTCGTGGGTCTT TGC GAGATCCTCGGCCTCGATCCGC TTTATCTCGCCAACG hypE 2244022 - 2245044 + | hydrogenase expression/formation protein HypE RSP_6117 2245112 - 2245507 + | hypothetical protein RSP_0511 2245560 - 2246135 + | two component LuxR family transcriptional regulator RSP_0512 2246349 - 2249186 + | PAS/PAC sensor hybrid histidine kinase RSP_0513 2250626 - 2249199 - | hypothetical protein RSP_0514 2251820 - 2250807 - | dTDP-glucose 4,6-dehydratase protein RSP_0515 2252958 - 2251882 - | hypothetical protein RSP_0516 2254046 - 2252955 - | hypothetical protein RSP_0517 2255155 - 2254046 - | hypothetical protein TERM 1089 2254265 - 2254245 - G 73 -6.1 -4.46212 | CGGGCGACGAGAAAA TCCGTTCCG GTG CGGAAAAGA CCCTCGCTGTCCGAC RSP_0518 2256257 - 2255157 - | putative glycosyltransferase protein RSP_0519 2258272 - 2256254 - | NAD-dependent epimerase/dehydratase TERM 1090 2258112 - 2258080 - G 71 -15.5 -3.06492 | GGATGCAGGGCAAGA GGTCGATCTCGCGGC CGA GCCGCGGGATCAGCC AGTCGAACCAATCCG RSP_0520 2259375 - 2258269 - | NAD-dependent dehydratase/epimerase RSP_0521 2259613 - 2260611 + | putative Zn-containing dehydrogenase RSP_0522 2260602 - 2261627 + | putative oxidoreductase RSP_0523 2261634 - 2262422 + | hypothetical protein RSP_0524 2263328 - 2262525 - | hypothetical protein TERM 1091 2263522 - 2263553 + G 73 -13.7 -3.32022 | gap 1 CCCCCGATCCGGCTA CAGCCGCG-CCGAG CGCCT CTCGGACGCGGCGG TTCATGTCTCGGGCA RSP_0525 2263490 - 2264149 + | hypothetical protein RSP_0526 2264159 - 2264590 + | hypothetical protein rpoN 2265927 - 2264623 - | sigma-54, RpoN nifW 2266354 - 2266028 - | nitrogenase stabilizing/protective protein nifV 2267539 - 2266463 - | homocitrate synthase nifS 2268702 - 2267539 - | cysteine desulfurase nifU 2269442 - 2268702 - | nitrogen fixation protein RSP_0532 2269772 - 2269452 - | hypothetical protein nifQ 2270875 - 2270336 - | putative nitrogen fixation protein nifQ RSP_0534 2271158 - 2270856 - | putative dimeric ferredoxin (FdIII) RSP_0535 2271742 - 2271272 - | hypothetical protein nifX 2272215 - 2271739 - | putative nitrogenase molybdenum-iron protein NifX nifN 2273554 - 2272187 - | nitrogenase molybdenum-iron protein beta chain, nifN nifE 2275017 - 2273554 - | nifE, nitrogenase molybdenum-cofactor synthesis protein TERM 1092 2275219 - 2275197 - R 100 -20.6 -3.91897 | opp_overlap 2275197 CGCGCCATGCAGAAA CGGCCGGTGC GGG GCACCGGCCG TTCTGCGCCTGGCTG TERM 1093 2275197 - 2275219 + r 91 -20.6 -3.31461 | opp_overlap 2275197 CGCGCCATGCAGAAA CGGCCGGTGC GGG GCACCGGCCG TTCTGCGCCTGGCTG nifK 2276784 - 2275264 - | nitrogenase molybdenum-iron protein beta chain nifD 2278366 - 2276885 - | nitrogenase iron-molybdenum protein, alpha chain TERM 1094 2278419 - 2278397 - R 95 -18.4 -3.6682 | CGGCAGGGAGGGAAA GGGACCGGGC GGC GCCCGGCCCC CGCTCGGATCAGGCC nifH 2279303 - 2278428 - | nitrogenase reductase TERM 1095 2279374 - 2279400 + r 86 -2.1 -5.23016 | gap 1, overlap 2279375 2279377 2279378 CGCCTCTTCAAAGCA GCCG-CCGTGCC AAGA GGCGCGGTCTGA TTTTTTACATTCTTT RSP_0542 2280577 - 2279747 - | hypothetical protein fixU 2280797 - 2280582 - | hypothetical protein nifZ 2281078 - 2280794 - | nitrogen fixation protein NifZ RSP_0545 2281832 - 2281065 - | hypothetical protein nifB 2283514 - 2282039 - | NifB family--FeMo cofactor biosynthesis protein nifA 2285506 - 2283761 - | NifA subfamily transcriptional regulator RSP_0548 2286181 - 2285786 - | hypothetical protein TERM 1096 2286071 - 2286088 + g 70 -2.5 -4.58395 | overlap 2286035 GGGCGCGTCGCGGAT GTCGAGC AGGA GCGCGCC TTTTTCCGCCATGAG RSP_0549 2286494 - 2287276 + | hypothetical protein RSP_0550 2287395 - 2288462 + | putative D-alanyl-D-alanine carboxypeptidase RSP_0551 2288475 - 2289128 + | thymidylate kinase RSP_6118 2289955 - 2289308 - | hypothetical protein RSP_0552 2290223 - 2290564 + | multidrug ABC transporter ruvB 2291859 - 2290834 - | Holliday junction DNA helicase B htpx 2292826 - 2291924 - | heat shock protein HtpX ruvA 2293619 - 2292945 - | Holliday junction DNA helicase motor protein ruvC 2294122 - 2293616 - | Holliday junction resolvase RSP_0557 2294442 - 2294654 + | hypothetical protein TERM 1097 2294700 - 2294724 + T 100 -13.6 -4.56914 | gap 1, opp_overlap 2294700 GGACCATCTGCCAAA GGCCGC-TCCC CACC GGGACGCGGCC TTTTCCTTTGCCTGA TERM 1098 2294724 - 2294700 - T 83 -14.9 -3.56092 | opp_overlap 2294700 GGACCATCTGCCAAA GGCCGCTCCCC ACC GGGACGCGGCC TTTTCCTTTGCCTGA RSP_0558 2295881 - 2295006 - | 50S ribosomal protein L11P methyltransferase msrA 2296619 - 2295945 - | peptide methionine sulfoxide reductase priA 2299033 - 2296841 - | primosome assembly protein PriA RSP_0561 2299128 - 2299787 + | putative translaldolase RSP_0562 2299810 - 2300499 + | hypothetical protein xerC 2300496 - 2301416 + | site-specific tyrosine recombinase XerC RSP_0564 2301525 - 2302244 + | hypothetical protein RSP_0565 2302340 - 2303056 + | CDP-diacylglycerol-choline O-phosphatidyltransferase RSP_0566 2303900 - 2303064 - | DMT family permease RSP_0567 2304407 - 2303964 - | methylated-DNA-(protein)-cysteine S-methyltransferase RSP_6119 2304649 - 2304404 - | hypothetical protein ileS 2307587 - 2304633 - | isoleucyl-tRNA synthetase TERM 1099 2306301 - 2306285 - G 74 -9.3 -4.07568 | TGCCCTTCGCGAAAA GGCCCCC CGC GCGGGCC AGCGCCTTGATGACC TERM 1100 2306909 - 2306894 - G 83 -5.4 -4.86939 | gap 1 CAACAAACGCAAAAA GCCGGTC CTT GAC-GGC CACCACCGGGAACTT RSP_0569 2308837 - 2307782 - | hypothetical protein RSP_0570 2310368 - 2308938 - | hypothetical protein truA 2310595 - 2311362 + | tRNA pseudouridine synthase A RSP_0572 2313651 - 2311564 - | putative exonuclease TERM 1101 2312288 - 2312238 - G 81 -18.1 -3.05769 | overlap 2312232 2312231 2312241 GCTCGAAATCATAGA CCACGGCGCGCGGAATGGGCCGC GGGCG GCGGCCCGTGCGGCGCGCGGTGC GCAGCGGCAGGCAGA TERM 1102 2312285 - 2312241 - G 79 -18.4 -2.74525 | overlap 2312232 2312231 2312238 CGAAATCATAGACCA CGGCGCGCGGAATGGGCCGC GGGCG GCGGCCCGTGCGGCGCGCGG TGCGCAGCGGCAGGC phoB 2314044 - 2313655 - | response regulator receiver protein RSP_0574 2314567 - 2314046 - | hypothetical protein RSP_0575 2316398 - 2314578 - | signal transduction protein RSP_0576 2318279 - 2316462 - | Na+/solute symporter RSP_0577 2318555 - 2318295 - | hypothetical protein TERM 1103 2318608 - 2318638 + r 72 -14.8 -2.90496 | gap 1, overlap 2318605 AGGTTTCTTCTTCAT GC-CCGGTCCCTC CTCCTC GAGGGACCGGGGC TCGTTTACGCCGACA RSP_0578 2319296 - 2318643 - | adenylate kinase RSP_0579 2321297 - 2319336 - | Acetyl-coenzyme A synthetase RSP_0580 2323288 - 2321390 - | SulP family sulfate transporter TERM 1104 2321480 - 2321497 + g 76 -3.4 -4.63542 | gap 1, opp_overlap 2321480, overlap 2321482 AATCATGAAAACGGA C-AGCGC CATTT GCGCTTG TTTTTCAACGTTCTG TERM 1105 2321482 - 2321494 + g 73 -6.2 -4.42235 | opp_overlap 2321480, overlap 2321480 TCATGAAAACGGACA GCGC CATTT GCGC TTGTTTTTCAACGTT RSP_0581 2323361 - 2323855 + | hypothetical protein TERM 1106 2324097 - 2324109 + G 73 -10.5 -3.85698 | overlap 2324084 CACCTCGCCGCGCCC GCCGC GCC GCGGC TTTCTCGAGCCGCCG TERM 1107 2325243 - 2325216 - g 73 -11.2 -3.73534 | gap 1, overlap 2325217 CAAGGGCACGAAGAA GGGCGCG-CGACG CAT CGCCGTCGCGGCC AAGACCGGCACGCTC RSP_0582 2324005 - 2325462 + | penicillin binding protein RSP_0583 2326044 - 2325622 - | hypothetical protein lysK 2326302 - 2327882 + | lysyl-tRNA synthetase osmC 2328340 - 2328762 + | osmotically inducible protein OsmC TERM 1108 2328772 - 2328813 + T 100 -28.7 -3.48276 | opp_overlap 2328740 2328767 GCCTGAGACAGGTCC GGCAGCCGGGGCGGCAGGG GATG CGCTGCCGCCCCGGCCGCC TTGTGTGCAGGGAAG nadD 2329674 - 2329105 - | nicotinic acid mononucleotide adenylyltransferase TERM 1109 2329717 - 2329743 + H 72 -5.7 -4.25256 | overlap 2329712 CACCCGCTCCTCCTC GCATGGCGGGA TCCGT TCCGGCCGCGC TTCTTTTCCTGCGGG RSP_0587 2329855 - 2331510 + | putative ABC transporter ATP-binding protein RSP_0588 2331507 - 2331866 + | hypothetical protein RSP_0589 2332208 - 2332005 - | hypothetical protein TERM 1110 2332302 - 2332285 - H 87 -4.7 -5.10208 | TAACCGGAATAAAAA GGCCGGC AGGA ACCGTCC AGTGGTCAAGGCGTT RSP_6120 2332354 - 2332506 + | hypothetical protein RSP_0590 2332887 - 2332597 - | hypothetical protein TERM 1111 2333008 - 2332994 - H 71 -2.7 -4.63184 | overlap 2332995 AATCCAGTTGAAAAA CGCCG CACTT CGGCC ATACTGCGGTGCGCG RSP_0591 2333138 - 2333344 + | cold-shock DNA-binding protein family protein TERM 1112 2333366 - 2333385 + F 95 -15 -4.2349 | TTCCTCGGCGGACAG GGGCAGGC TCCG GCCTGCCC TTTTGCATGTCAGCC RSP_0592 2333438 - 2334406 + | putative lipase/esterase RSP_0594 2334500 - 2336005 + | putative choline sulfatase RSP_0595 2336603 - 2336088 - | hypothetical protein RSP_0596 2338705 - 2336687 - | peptidyl-dipeptidase Dcp RSP_0597 2339841 - 2338792 - | molybdopterin biosynthesis protein RSP_0598 2340305 - 2339838 - | deoxyuridine 5'-triphosphate nucleotidohydrolase RSP_0599 2341601 - 2340411 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 1113 2340690 - 2340639 - G 72 -12.8 -3.53012 | gap 1, opp_overlap 2340662, overlap 2340640 GGTCTCGGCGGCAAA GCCCACCACGAGC-CGCGGGCGGCC CTC GGCCCTCCGCGCGACCGTGGCGAGG ATGTCGGGGTTCTCG TERM 1114 2340689 - 2340640 - G 72 -16.3 -2.71712 | gap 1, opp_overlap 2340662, overlap 2340639 GTCTCGGCGGCAAAG CCCACCACGAGC-CGCGGGCGGCC CTC GGCCCTCCGCGCGACCGTGGCGAG GATGTCGGGGTTCTC RSP_0600 2342491 - 2341664 - | hypothetical protein TERM 1115 2341769 - 2341746 - G 76 -11.6 -3.74345 | AGCCACAGATCGAAA GGCACCTCCC CCTC GGGCGGCGCC TCGAACTGGCCGATG TERM 1116 2342326 - 2342304 - G 80 -18.4 -2.91728 | overlap 2342299 ATCTCGAAGACGAGA GCGGCGGGCC TGA GGCCCGCCAC CGCCAGCGCCTGATT rpoH2 2343366 - 2342488 - | RNA polymerase factor sigma-32 RSP_0602 2343421 - 2343975 + | adenosylcobinamide kinase RSP_0603 2343972 - 2344550 + | hypothetical protein TERM 1117 2344596 - 2344538 - T 80 -16.8 -3.16564 | gap 3 CGTCGAGGCGATCAA CCGCCTCGCCTGAGGCCGGCTGCG-GCGA CGCA TCGCGCGCA-CCGGCCTCCGGC-AGCCCG CCTGCAGCTGTTCCC RSP_0604 2346215 - 2344845 - | hypothetical protein RSP_0605 2346456 - 2346761 + | hypothetical protein RSP_0606 2347274 - 2347747 + | putative redox protein TERM 1118 2347766 - 2347797 + G 75 -16.6 -2.60212 | overlap 2347769 CTACCTGCAGATTTT CGAGACGCGGCGGC CCCA GCTGCTGCGTCTTG CTTATCGGATGCTGG TERM 1119 2347769 - 2347794 + G 77 -14.7 -3.45118 | overlap 2347766 CCTGCAGATTTTCGA GACGCGGCGGC CCCA GCTGCTGCGTC TTGCTTATCGGATGC RSP_0607 2347737 - 2348597 + | RNA polymerase sigma factor SigJ RSP_0608 2349434 - 2349051 - | hypothetical protein RSP_0609 2348723 - 2349103 + | hypothetical protein RSP_0610 2350285 - 2349479 - | putative 3-oxoacyl-(acyl-carrier-protein) reductase RSP_0611 2350328 - 2350711 + | ArsR family transcriptional regulator RSP_0612 2351614 - 2350985 - | RhtB family transporter TERM 1120 2351591 - 2351545 - G 73 -6.5 -4.32034 | gap 1, overlap 2351521 2351547 CCACGATCAGGAAAA GATCGGGGCCGGGCGTGATCGT CAGA ACGATCAC-CGCAGACACGAAC ATGAAGAGTGTGACG RSP_0613 2351902 - 2352414 + | hypothetical protein RSP_0614 2352461 - 2352757 + | hypothetical protein RSP_0615 2353740 - 2352823 - | putative oxidoreductase RSP_0616 2353834 - 2354577 + | AraC family transcriptional regulator RSP_0617 2354634 - 2355188 + | hypothetical protein RSP_0618 2355346 - 2355164 - | hypothetical protein RSP_0619 2355658 - 2356044 + | hypothetical protein RSP_0620 2356138 - 2356488 + | hypothetical protein RSP_0621 2356523 - 2361670 + | DNA helicase RSP_0623 2362295 - 2362113 - | hypothetical protein RSP_0624 2363335 - 2362292 - | hypothetical protein RSP_0625 2363910 - 2363332 - | putative Maf-like protein TERM 1121 2363697 - 2363644 - G 90 -16 -3.96624 | overlap 2363682 2363683 CAGGGCCACGAGAAA GCGCGCGGCC-TCGCCCGCATCGGCA GGCT TGCCGA-GAATGCGACGGCCGAGCGC CACCGTCGTGTCGGC infA 2364129 - 2363911 - | translation initiation factor IF-1 RSP_0627 2365179 - 2364304 - | putative amidohydrolase RSP_0628 2365786 - 2365199 - | hypothetical protein RSP_0629 2366184 - 2365783 - | hypothetical protein RSP_0630 2366662 - 2366171 - | hypothetical protein RSP_0631 2367135 - 2366659 - | hypothetical protein hisD 2368443 - 2367139 - | histidinol dehydrogenase RSP_6122 2369144 - 2368665 - | hypothetical protein RSP_0633 2370412 - 2369144 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1122 2371205 - 2371175 - R 78 -13.2 -3.59979 | overlap 2371200 GCCCCCCAGGCGAAA GACCCCTGCCGCGC CAT GCGGAACAGGGGCC GGGCGCCGCTAGAAC RSP_0634 2372521 - 2371214 - | TRAP dicarboxylate family transporter DctM subunit RSP_0635 2373049 - 2372531 - | TRAP dicarboxylate family transporter DctQ subunit RSP_0636 2374232 - 2373108 - | TRAP dicarboxylate family transporter DctP subunit RSP_0637 2375044 - 2374319 - | hypothetical protein TERM 1123 2374979 - 2374952 - G 73 -10.5 -3.85698 | gap 1 CCGCTGGCCGAGAAA GCCCG-CGCCCG CCTCT CCGGCGACGGGC ACCTCGCGGAGGTCG RSP_0638 2376333 - 2375041 - | putative FAD dependent oxidoreductase protein RSP_0639 2378011 - 2376335 - | putative N-methylhydantoinase B RSP_0640 2380033 - 2378015 - | putative N-methylhydantoinase A TERM 1124 2379350 - 2379373 + g 83 -7.4 -4.72272 | gap 1 CATCACCGACAGCCG CTGGCCGAAGC CGC GCT-CGGACAG TTTTTCCTCGAGCCG RSP_0641 2380273 - 2380908 + | XRE family transcriptional regulator RSP_0642 2380915 - 2381859 + | RhaT family protein RSP_0643 2382164 - 2384014 + | periplasmic sensor signal transduction histidine kinase RSP_0644 2384734 - 2384018 - | ABC transporter, inner membrane subunit RSP_0645 2385411 - 2384731 - | ABC transporter, ATPase subunit RSP_0646 2386346 - 2385411 - | ABC transporter, substrate-binding protein thiD 2387146 - 2386343 - | phosphomethylpyrimidine kinase thiE 2387754 - 2387143 - | thiamine-phosphate pyrophosphorylase thiM 2388539 - 2387751 - | putative hydoxyethylthiazole kinase TERM 1125 2387928 - 2387886 - G 87 -16.3 -3.63515 | CGCGAGCCCGAAGAA GGCGAGCGCCGCCGCCG-TCG CCT CGAACGGCGGCCGGG-TCGCC GCGAAGGCGCCCACG RSP_0650 2389370 - 2388918 - | transglycosylase RSP_0651 2390161 - 2389367 - | putative inositol monophosphatase protein RSP_0652 2391158 - 2390172 - | UDP-galactose 4-epimerase RSP_0653 2392472 - 2391168 - | UDP-glucose 6-dehydrogenase RSP_0654 2393451 - 2392540 - | DMT family permease TERM 1126 2393322 - 2393302 - G 73 -11.1 -3.75153 | overlap 2393311 GGCCCCGAAGGCAAA GCGCAGGAA GGC CCCCTGCGC CGCAGGAATGTCGGT RSP_0655 2394374 - 2393628 - | hypothetical protein RSP_0656 2396247 - 2394469 - | sodium/sulphate symporter TERM 1127 2396342 - 2396304 - R 71 -11.8 -3.53563 | AGACGCCCGCGCAAA GC-CGCCGTGCGACCG GACCCTCGG CGG-CGCACGGCGCGC CTGTCGGGCGGGCAG RSP_0657 2397169 - 2396360 - | hypothetical protein TERM 1128 2398020 - 2398034 + G 74 -2.7 -4.63218 | TCTTCCACAACACGC GCGCG CAGGC CGAGC TTTTCTTCCACGCGC RSP_0658 2397254 - 2399653 + | ATP-dependent helicase TERM 1129 2400227 - 2400247 + G 75 -10.3 -3.96148 | opp_overlap 2400219 CCGAAATGCGCGCTG GCGGGGCGG GCC CGGCCCTGC TTTCTCCTCGACGGG RSP_0659 2399759 - 2400445 + | putative metallo-phosphoesterase RSP_0660 2401128 - 2400409 - | hypothetical protein RSP_0661 2402133 - 2401243 - | methenyltetrahydrofolate cyclohydrolase RSP_0662 2402447 - 2402130 - | chorismate mutase RSP_0663 2404195 - 2402522 - | formate--tetrahydrofolate ligase RSP_0664 2405241 - 2404276 - | hypothetical protein TERM 1130 2405442 - 2405415 - R 100 -21.4 -4.05788 | opp_overlap 2405409 GGGGCGCAAAGGAAA GCCCCGAAGCCT TCGC AGGCTTCGGGGC TCCAAGTCGCTTCCC ftsH 2407370 - 2405469 - | membrane protease FtsH catalytic subunit TERM 1131 2406897 - 2406930 + g 74 -7.3 -4.18018 | gap 1, overlap 2406899 2406918 CTTGGCTTCGTCGAT GC-CGGCCACGTCGTC GAA GGTGACGCGGCCCTGC TTTTCGGTCAGAAGC RSP_0666 2408687 - 2407449 - | cell cycle protein TERM 1132 2408666 - 2408621 - G 93 -18.9 -3.53012 | gap 1, overlap 2408605 CGCCGCCCCCCGAAA CGGCGAGGCCCAGGGCC-CGCG TCT CGCGCAGCCCCGGGCCCCTCAG GAACCGCTCGCGCAG RSP_0667 2409511 - 2408687 - | hypothetical protein RSP_0668 2410064 - 2409516 - | OmpA/MotB family protein tolB 2411483 - 2410149 - | translocation protein TolB RSP_0670 2412800 - 2411553 - | hypothetical protein RSP_0671 2413281 - 2412811 - | ExbD/TolR family protein TolQ 2413983 - 2413285 - | biopolymer transport protein, TolQ RSP_0673 2414508 - 2414110 - | putative thioesterase RSP_6124 2414776 - 2415087 + | hypothetical protein RSP_0674 2415483 - 2416595 + | DNA polymerase III subunit delta' TERM 1133 2417217 - 2417177 - g 72 -12.6 -3.53012 | opp_overlap 2417177 GCGGCCTTCCCGAAA TCG-GCCGAGCTGCGGGCGA TCT TCGCC-GCGGCTCCGCTCGA GCGCATCCTGCTCGA RSP_0675 2416607 - 2417404 + | putative TatD-related deoxyribonuclease RSP_0676 2417404 - 2418201 + | PhnP-like protein TERM 1134 2418474 - 2418494 + G 73 -11.1 -3.74056 | overlap 2418439 2418466 GCCGGGCGCGCGCTG GCCGATTGC GTG GCCATCGGC TTTGCCTGCTTCTTC RSP_0677 2418198 - 2419136 + | malonate transporter MdcF RSP_0678 2421868 - 2419121 - | hypothetical protein TERM 1135 2419881 - 2419858 - G 72 -12.4 -3.43492 | GCACATTCACCAGAA GCGCGGCC CAGGCGGC GGCCGCGC TCTCGGCCACGGCGC RSP_6125 2423058 - 2422303 - | hypothetical protein TERM 1136 2423193 - 2423154 - R 73 -7 -4.1552 | gap 1, overlap 2423155 CACCCGCGCAAGAAA CTGTCGCGGAGGCTGCCGC ACC GCGGCCGCCTCAAGG-CAA AGGGGCGGCCCGAAG TERM 1137 2423216 - 2423195 - R 95 -18.7 -3.75153 | CCGCCTCAAGGCAAA GGGGCGGCC CGAA GGCCGCCCC CCATCCATGCCCGTG hemC 2424180 - 2423236 - | porphobilinogen deaminase hemE 2424282 - 2425313 + | uroporphyrinogen decarboxylase TERM 1138 2425360 - 2425314 - f 95 -24.5 -2.52543 | gap 1 ATCCGCGGCAAGTGA GGCAGGCGGGGGGCGGCTCACG CATC CTTGAGCCGCCCCCCGT-TGCC AAGAGCCCGAGGTCC RSP_0681 2425488 - 2426039 + | hypothetical protein hemF 2427055 - 2426180 - | coproporphyrinogen III oxidase TERM 1139 2426956 - 2426993 + g 80 -17 -3.16564 | GAGAGCCGCCTGTGG CCGCATCCTCGAGTCC CTCGAA GGCCGCGAGGATGCGG TTCCTCAGCTCGCGG RSP_0683 2427172 - 2427585 + | hypothetical protein RSP_0684 2428413 - 2427604 - | oxidoreductase RSP_0685 2429427 - 2428426 - | 16S rRNA m(2)G 1207 methyltransferase TERM 1140 2429192 - 2429169 - G 75 -15.2 -3.28712 | CCGCCTCGGCCAGAA GCGCGCGGGC CTCG GCCCGGGCGC GCGGCAGGCAGACGA RSP_0686 2429764 - 2429444 - | ATP-dependent Clp protease adaptor protein clpS RSP_0687 2429936 - 2430649 + | HAD superfamily hydrolase RSP_0688 2430748 - 2432253 + | penicillin-binding protein TERM 1141 2432308 - 2432272 - T 71 -11.6 -3.64703 | gap 1, opp_overlap 2432279, overlap 2432279 CCGGCCCGAGCCAAA GGACGAAGGCCCGCGGA GAGA TCCGCGGGCCTTT-TCG TTTGGGGTCAGTCTG TERM 1142 2432279 - 2432302 + T 100 -19.6 -4.55798 | opp_overlap 2432272 2432279 GAGCCAAAGGACGAA GGCCCGCGGA GAGA TCCGCGGGCC TTTTCGTTTGGGGTC TERM 1143 2432302 - 2432279 - T 91 -19.6 -3.33483 | opp_overlap 2432279, overlap 2432272 GAGCCAAAGGACGAA GGCCCGCGGA GAGA TCCGCGGGCC TTTTCGTTTGGGGTC rdxS 2432518 - 2432360 - | RdxS, cytochrome oxidase maturation protein, cbb3-type rdxI 2434731 - 2432518 - | copper-translocating P-type ATPase, RdxI rdxH 2435193 - 2434735 - | RdxH rdxB 2436628 - 2435195 - | iron-sulfur cluster-binding protein ccoP 2437735 - 2436863 - | Cbb3-type cytochrome c oxidase CcoP subunit TERM 1144 2437745 - 2437779 + r 81 -12.1 -3.86202 | overlap 2437746 ACTCATTTCCTCGCC TCCTCGGACGACGAC ACCGG GTCGTCGTCGGCGGG TTTCGTCTCGTGGCG ccoQ 2437935 - 2437732 - | Cbb3-type cytochrome c oxidase CcoQ subunit ccoO 2438673 - 2437948 - | Cbb3-type cytochrome c oxidase CcoO subunit ccoN 2440297 - 2438690 - | Cbb3-type cytochrome oxidase CcoN subunit RSP_0697 2440493 - 2441341 + | universal stress protein TERM 1145 2441361 - 2441384 + T 79 -11.6 -4.07568 | opp_overlap 2441351 2441350 2441347, overlap 2441362 AGAAGGGGCTGCCTC TGCCCGCCTC GCAA GGGGCGGGCC TTTTCAAGCCGGCCG TERM 1146 2441362 - 2441383 + T 74 -15.1 -3.04398 | opp_overlap 2441351 2441350 2441347, overlap 2441361 GAAGGGGCTGCCTCT GCCCGCCTC GCAA GGGGCGGGC CTTTTCAAGCCGGCC fnrL 2442167 - 2441421 - | Crp-Fnr regulatory protein (FnrL) hemZ 2442230 - 2443582 + | coproporphyrinogen III oxidase RSP_0700 2444816 - 2443593 - | glycosyltransferase TERM 1147 2444654 - 2444709 + g 75 -14.7 -3.31461 | gap 3 GTGTCGCCTGCGGGT CGGGCGCG-GGCGCCTCGTGCCGGTAGC GCA GC-ACCGGGATC-GGCGCCTCGCGCCGG TTCTCGCCATCGGTG RSP_0701 2446453 - 2444822 - | peptide ABC transporter ATPase RSP_0702 2447556 - 2446450 - | ABC peptide transporter, inner membrane subunit TERM 1148 2447121 - 2447158 + g 70 -14.1 -3.25719 | gap 1, overlap 2447120 TGCCGAGCCAGTGGT CGGCATCGGGCGGCGAGG GCG CCGCGC-GACCGATGTCG TTGATCGTGTCGTAG RSP_0703 2448646 - 2447558 - | ABC peptide transporter, inner membrane subunit RSP_0704 2450599 - 2448662 - | ABC peptide transporter, substrate binding protein TERM 1149 2450742 - 2450723 - R 100 -16.4 -5.1971 | AGGAAAAACGAAAAA GGCCGCCC GATC GGGCGGCC CTTCAAGAAACAGGG RSP_0705 2451292 - 2450768 - | cytochrome cy TERM 1150 2451376 - 2451388 + G 74 -2.6 -4.72272 | TAGCGCCGCCGGACG CGGG GACAA CCTG TTTTTGATCGCGGAG pheA 2451344 - 2452246 + | prephenate dehydratase RSP_0707 2452771 - 2452265 - | hypothetical protein RSP_0708 2453762 - 2452809 - | NUDIX hydrolase cpdB 2453997 - 2455889 + | 2',3'-cyclic-nucleotide 2'-phosphodiesterase dnaX 2456212 - 2457960 + | DNA polymerase III subunits gamma and tau YbaB 2457973 - 2458317 + | hypothetical protein TERM 1151 2458389 - 2458409 + G 75 -13.9 -3.44051 | CGGGGCTCGGGCCCC GCTCCGCCC GCC GGGCGGTGC TTCTGATGCTGAAGA recR 2458319 - 2458918 + | recombination protein RecR RSP_0713 2460289 - 2458997 - | hypothetical protein TERM 1152 2459219 - 2459176 - G 100 -18.8 -3.83318 | gap 1 TCGCGAAGAAGACAA GCGCGAGCGGCAGGCCGC-CT CCC AGCGCGGGCAGCCGCTCGGGC GCGAGATAGAGCAGG TERM 1153 2460341 - 2460310 - R 100 -24.6 -3.53811 | opp_overlap 2460319, overlap 2460319 TCGACGCGGCTCAAA CGGGAACAACCGCC CGAG GGCGGTTGTTCCCG TGGTCGCTCATCGAA TERM 1154 2460332 - 2460319 - R 71 -9.5 -3.70919 | opp_overlap 2460319, overlap 2460310 CTCAAACGGGAACAA CCGCC CGAG GGCGG TTGTTCCCGTGGTCG RSP_0714 2461159 - 2460413 - | hypothetical protein RSP_0715 2461281 - 2461901 + | ribonuclease T2 TERM 1155 2461947 - 2461925 - T 80 -16.2 -3.14132 | opp_overlap 2461937 2461940 2461941 CGCCCGGCGGAGGAA GGCCGGGGGC GCT GCCCCCGGAC CCCCGGGATATTTGA RSP_0716 2463192 - 2462206 - | NADPH/quinone reductase and related Zn-dependent oxidoreductase TERM 1156 2463311 - 2463290 - R 76 -13.7 -3.53444 | opp_overlap 2463295 GCAGCGGCTGTGAAA TGCCCGCCC GCGC GGGCAGGCA TCGGAAGCGCGCGCG TERM 1157 2463295 - 2463329 + r 73 -12.8 -3.40403 | opp_overlap 2463290 GGCTGTGAAATGCCC GCCCGCGCGGGC AGGCATCGGAA GCGCGCGCGGGC TTCTCCTCAGAAGCG RSP_0717 2464028 - 2463336 - | hypothetical protein rpsU 2464235 - 2464441 + | 30S ribosomal protein S21 TERM 1158 2464489 - 2464512 + F 100 -11.6 -5.28942 | CTCGCCGCCATCGGA CCCCCGTCGC GCAA GTGTCGGGGG TTTTTCTTTCGGGTG RSP_0719 2464715 - 2465413 + | phosphatidylserine decarboxylase pssA 2465417 - 2466154 + | CDP-alcohol phosphatidyltransferase PmtA 2466178 - 2466792 + | phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase RSP_0722 2467289 - 2466831 - | AsnC family transcriptional regulator ald 2467429 - 2468547 + | L-alanine dehydrogenase mscL 2469263 - 2468823 - | large-conductance mechanosensitive channel TERM 1159 2469055 - 2469029 - G 71 -15 -3.05963 | ATCCGTAGGCGAAGA CCGGGGCGCCCG CAT CGCGCGCCGCGG CGAGGCTCACATAAT RSP_0725 2470276 - 2469725 - | thioredoxin, thioldisulfide interchange protein TERM 1160 2470212 - 2470189 - G 75 -15.2 -3.28712 | opp_overlap 2470201, overlap 2470190 TGTCGCCCGCCAGAA GGGCCCCGGC ATCG GCCGGGGCCG CCGCCACGCCGTTTG TERM 1161 2470211 - 2470190 - G 82 -18.7 -2.57132 | opp_overlap 2470201, overlap 2470189 GTCGCCCGCCAGAAG GGCCCCGGC ATCG GCCGGGGCC GCCGCCACGCCGTTT RSP_0726 2470298 - 2471713 + | argininosuccinate lyase RSP_0727 2471865 - 2472083 + | hypothetical protein RSP_0728 2472085 - 2472402 + | hypothetical protein lysA 2472597 - 2473862 + | diaminopimelate decarboxylase RSP_0730 2473891 - 2476395 + | hypothetical protein RSP_0731 2476773 - 2476597 - | hypothetical protein RSP_0732 2477687 - 2476773 - | hypothetical protein TERM 1162 2477321 - 2477378 + g 70 -14.7 -2.84801 | overlap 2477307 2477363 CGGCGCCGAACGGGG TCCCGGTCTCCGGCTCGGCCGCCTT ATCGGACC GGGGCGGCTGGGCCTCGGCCCGGGA TCCTATTTCCGGCTC RSP_0733 2477851 - 2478522 + | cell division ATP-binding protein FtsE TERM 1163 2478980 - 2478932 - g 70 -15.2 -2.90723 | gap 2, overlap 2478935 GGAGGGCCAAGGATA CGACGCGCAGGGCCTGCGCCAGCG CCT CGCGGCCG-AGGCCCCGGGCG-CG ATCCTCGACGACCAT TERM 1164 2478978 - 2478935 - g 76 -16.6 -2.69964 | gap 1, overlap 2478932 GGGCCAAGGATACGA CGCGCAGGGCCTGCGCCAGCG CCT CGCGGCCG-AGGCCCCGGGCG CGATCCTCGACGACC RSP_0734 2478519 - 2479421 + | cell division protein FtsX RSP_0735 2479423 - 2480148 + | phospholipid/glycerol acyltransferase mobC 2480751 - 2480161 - | MobC protein TERM 1165 2480580 - 2480530 - G 75 -13.9 -3.53012 | gap 1, opp_overlap 2480532, overlap 2480568 GGTGCCGCCTGCAAA GCCGCCGGCCGGCGTCTTGAAGCC CGCG AGCCCCA-GAAGCCGGCCCTCGGC ATCGACGGCCGCCAG mobB 2482106 - 2480748 - | molybdopterin guanine dinucleotide synthesis mobA 2482684 - 2482103 - | molybdenum cofactor guanylyltransferase RSP_0739 2482760 - 2483467 + | branched chain amino acid efflux pump, large (AzlC) subunit RSP_6126 2483464 - 2483796 + | putative transmembrane protein RSP_6127 2484432 - 2483821 - | hypothetical protein RSP_6128 2484652 - 2484467 - | Aa3-type cytochrome c oxidase subunit IV RSP_0741 2485746 - 2484712 - | putative metallo-beta-lactamase family protein RSP_0742 2487431 - 2485743 - | acyl-CoA dehydrogenase RSP_0743 2487540 - 2488478 + | translation factor SUA5 RSP_0744 2489216 - 2488629 - | DNA-3-methyladenine glycosylase I TERM 1166 2489246 - 2489232 - H 72 -3.5 -4.56597 | gap 1, overlap 2489234 GTCCGTCCGGAAAAA GAGGCG ACTG CGCC-C ACCTTTAAGGCCCCG TERM 1167 2490615 - 2490605 - g 74 -2.4 -4.66833 | CCGCAACGCCAAAAA GGGC CTC GCCA CCCTCTGCATCGGCG RSP_0745 2489502 - 2490668 + | acetyl-CoA acetyltransferase TERM 1168 2490716 - 2490690 - f 70 -12.3 -3.32844 | opp_overlap 2490691, overlap 2490691 GCGGCGATCTGACAA CGGGTGCGCAA TAATG TTGCGCACCCT TTTCCATATCTATAA TERM 1169 2490691 - 2490715 + F 100 -16.5 -4.27259 | opp_overlap 2490690 2490691 CGGCGATCTGACAAC GGGTGCGCAAT AAT GTTGCGCACCC TTTTCCATATCTATA TERM 1170 2490715 - 2490691 - f 73 -15.8 -2.59564 | opp_overlap 2490691, overlap 2490690 CGGCGATCTGACAAC GGGTGCGCAA TAATG TTGCGCACCC TTTTCCATATCTATA RSP_0747 2490768 - 2491490 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 1171 2491547 - 2491511 - T 82 -11.6 -4.11216 | gap 1, opp_overlap 2491515 2491516 2491518, overlap 2491516 2491518 TTCTCATCCTGAAAA CCAGAG-AGCCGCGCAG GGAT CTGCGCGGCTCCTTTCG TTTCACTGGAATCAA TERM 1172 2491515 - 2491542 + T 100 -17 -4.08485 | opp_overlap 2491511 2491516 2491518, overlap 2491516 2491518 CATCCTGAAAACCAG AGAGCCGCGCAG GGAT CTGCGCGGCTCC TTTCGTTTCACTGGA TERM 1173 2491516 - 2491541 + T 87 -20.5 -3.04609 | opp_overlap 2491516 2491511 2491518, overlap 2491515 2491518 ATCCTGAAAACCAGA GAGCCGCGCAG GGAT CTGCGCGGCTC CTTTCGTTTCACTGG TERM 1174 2491541 - 2491516 - T 87 -20.5 -3.10091 | opp_overlap 2491515 2491516 2491518, overlap 2491511 2491518 ATCCTGAAAACCAGA GAGCCGCGCAG GGAT CTGCGCGGCTC CTTTCGTTTCACTGG TERM 1175 2491518 - 2491539 + T 82 -17.3 -3.07332 | opp_overlap 2491516 2491511 2491518, overlap 2491516 2491515 CCTGAAAACCAGAGA GCCGCGCAG GGAT CTGCGCGGC TCCTTTCGTTTCACT TERM 1176 2491539 - 2491518 - T 82 -17.3 -3.10533 | opp_overlap 2491518 2491516 2491515, overlap 2491516 2491511 CCTGAAAACCAGAGA GCCGCGCAG GGAT CTGCGCGGC TCCTTTCGTTTCACT RSP_0748 2492660 - 2491899 - | N-6 adenine-specific DNA methylase RSP_0749 2492875 - 2492660 - | hypothetical protein RSP_0750 2492944 - 2493945 + | geranylgeranyl pyrophosphate synthase/polyprenyl synthetase TERM 1177 2493966 - 2493997 + F 74 -12.2 -3.60792 | gap 1, overlap 2493967 TCCGGGCGCTCTGCC CCGGCGCAGCGCAGG ATC CC-GCGCTGCGCCCC TTTCGGCCTTCCGAC TERM 1178 2493967 - 2493996 + F 70 -15.7 -2.76261 | gap 1, overlap 2493966 CCGGGCGCTCTGCCC CGGCGCAGCGCAGG ATC CC-GCGCTGCGCCC CTTTCGGCCTTCCGA TERM 1179 2494132 - 2494117 - f 79 -11.8 -4.07568 | GCGTCCGCCGCAAAA GCCCCC GCGG GGGGGC CTCACCGGCGGCCAT RSP_0751 2494236 - 2494739 + | hypothetical protein RSP_6129 2494961 - 2494740 - | hypothetical protein RSP_0752 2495077 - 2495562 + | acetyltransferase TERM 1180 2495715 - 2495693 - T 70 -12.6 -3.34043 | opp_overlap 2495693 GGTACCATCTCATAA GGCCCGGGCA TCG CGTCCGGGCC TTTTGCTTGCCACCC TERM 1181 2495693 - 2495715 + T 100 -14.1 -4.4078 | opp_overlap 2495693 GGTACCATCTCATAA GGCCCGGGC ATCGC GTCCGGGCC TTTTGCTTGCCACCC TERM 1182 2496319 - 2496300 - T 100 -15 -4.72272 | opp_overlap 2496287 2496300 CCTCCGCACGAAAAA GGGGCGGA TTGC TCCGCCCC TTCTGACAGGATCGC TERM 1183 2496300 - 2496319 + T 79 -15 -3.29511 | opp_overlap 2496300, overlap 2496287 CCTCCGCACGAAAAA GGGGCGGA TTGC TCCGCCCC TTCTGACAGGATCGC SspA 2497217 - 2496345 - | Salt-stress induced outer membrane protein TERM 1184 2497398 - 2497373 - R 76 -13.9 -3.47573 | CGACGGACATGAGAA GGCCCGGACGC TCAA GCAGCCGGGCC CAAAGGAATAATCGC RSP_0754 2497745 - 2497425 - | hypothetical protein nusB 2498529 - 2498062 - | NusB antitermination factor ribH1 2499068 - 2498532 - | 6,7-dimethyl-8-ribityllumazine synthase ribBA 2500175 - 2499072 - | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase RSP_6130 2501048 - 2500488 - | hypothetical protein RSP_0758 2501646 - 2501050 - | riboflavin synthase subunit alpha RSP_0759 2501868 - 2503004 + | putative capsule polysaccharide exporter mucS 2503943 - 2503434 - | MarR family transcriptional regulator RSP_0761 2504290 - 2504021 - | hypothetical protein RSP_0762 2504685 - 2504287 - | XRE family transcriptional regulator aatA 2504800 - 2506002 + | aspartate aminotransferase RSP_0764 2507441 - 2506086 - | MATE family efflux pump NorM RSP_0765 2508133 - 2507492 - | SAM-dependent methyltransferase RSP_0766 2509140 - 2508130 - | hypothetical protein TERM 1185 2508669 - 2508658 - G 72 -3.6 -4.56597 | GCTGCGGTCGAAAAA GACG ATCT CGCC CGCGGTCGGCAGATG TERM 1186 2509260 - 2509236 - R 100 -18.6 -4.12603 | GTCAGGAAATAATAA GGGGGTGGCG TTATC CGCCACCCCC AGCGCGGGAAACAAT RSP_6131 2510082 - 2509378 - | hypothetical protein RSP_0768 2511115 - 2510174 - | LuxR family transcriptional regulator TERM 1187 2510828 - 2510804 - G 70 -13.5 -3.14132 | CCCGTCGCTCAGGAA GGCCGGCACCC GCA GGATGCCCGCC AGCACCGCCTCGGCG RSP_0769 2511204 - 2511863 + | glutathione S-transferase parE 2511924 - 2513915 + | DNA topoisomerase IV subunit B RSP_0773 2515354 - 2514134 - | mannonate dehydratase TERM 1188 2514677 - 2514649 - G 72 -15.9 -2.79796 | CGGGATGGCAGCAGA GCCGCACGCCCAG CTC CTCGGCGAGCGGC GCCACCTCGGACAGG RSP_0774 2518174 - 2515853 - | RNA binding protein TERM 1189 2517067 - 2517089 + g 87 -15.6 -3.65046 | TCAGCTTCATCAGCT CGATCTGCGC CCC GCGCAGGTCG TTCTTGGGCTGGAAC TERM 1190 2518111 - 2518061 - G 80 -16.9 -3.14683 | overlap 2518088 ATAGCGGGCGACGAA GGGCACGGTCGCG-CCGCCGTCGAG AAG CTCGATGGCGGCCGCGACC-TGATC GGGACGGGCCGCGAT RSP_0775 2518677 - 2518258 - | class I monoheme cytochrome c LolD 2519380 - 2518706 - | ABC lipoprotein efflux transporter, ATPase subunit, LolD TERM 1191 2519322 - 2519336 + g 70 -12.8 -3.33737 | overlap 2519329 AGCACCGTCACCTCG CCGGGG CGG CCCCGG TTGTAGGCCTTGGTC LolE 2520659 - 2519373 - | ABC lipoprotein efflux transporter, inner membrane subunit, LolE ProS 2522112 - 2520775 - | prolyl-tRNA synthetase TERM 1192 2522412 - 2522467 + H 82 -18.3 -2.87132 | gap 2 CCCCGGCCCTGCCGC CCCCCG-TTCG-GAGGGTCCGCGCCGC CCCG GCGGCGGGGGCCTTCCCGGAGCGGAGG TCTCTCGCGACACCC perM 2522512 - 2523639 + | Lipocalin-related protein and Bos/Can/Equ allergen TERM 1193 2523667 - 2523691 + G 71 -7 -4.31293 | CCTTCGACCTGCCGA TCCGCCCGGC GCTGA GCCGCGAGGA TTTCTTCATCTCTCC RSP_0780 2523636 - 2524316 + | hypothetical protein RSP_0781 2524376 - 2526562 + | polyphosphate kinase RSP_0782 2526699 - 2528240 + | Ppx/GppA phosphatase RSP_0783 2528237 - 2528839 + | hypothetical protein RSP_0784 2528862 - 2529338 + | GNAT family acetyltransferase RSP_0785 2529370 - 2530053 + | putative heat shock protein DnaJ RSP_0786 2530054 - 2531073 + | endonuclease/exonuclease/phosphatase fa RSP_0787 2531589 - 2532005 + | hypothetical protein TERM 1194 2532605 - 2532634 + G 71 -15.7 -2.53876 | gap 1 GACCTCGCGGGCGTG GCGCGCCGCGCGAG CCT CTCG-GCCGCGCGC TGCCTTCAGCTGCGC RSP_0788 2532002 - 2532835 + | hypothetical protein cobC 2532845 - 2533819 + | aminotransferase pqqE 2535029 - 2533887 - | pyrroloquinoline quinone biosynthesis protein PqqE pqqD 2535325 - 2535029 - | putative pyrroloquinoline quinone synthesis protein D pqqC 2536089 - 2535322 - | pyrroloquinoline quinone biosynthesis protein PqqC pqqB 2536988 - 2536086 - | pyrroloquinoline quinone biosynthesis protein PqqB pqqA 2537087 - 2537007 - | putative coenzyme PQQ synthesis protein A catR 2538499 - 2537318 - | LysR family transcriptional regulator RSP_0795 2539039 - 2538620 - | hypothetical protein TERM 1195 2539342 - 2539317 - g 75 -12.5 -3.65201 | GAACATGTCGAACAA CGCGGCCGTCA CCGC CGACGGCGGCG AGATCGGGCGGGCGC cobQ 2539186 - 2540631 + | cobyric acid synthase RSP_6229 2540682 - 2541065 + | hypothetical protein gltX 2542391 - 2541066 - | glutamyl-tRNA synthetase RSP_0798 2542704 - 2543114 + | neutral zinc metallopeptidase TERM 1196 2543720 - 2543708 - g 71 -9.1 -4.11216 | GGGCCAGGTGGAAAA CGACC ATT GGTCG GCGCAGGGCAACGAA RSP_0799 2543202 - 2544131 + | hypothetical protein RSP_0800 2544608 - 2544351 - | hypothetical protein RSP_0801 2544668 - 2545807 + | deacetylase / acetylpolyamine aminohydrolase RSP_0802 2547216 - 2546149 - | dipeptidase AC DppF 2547968 - 2547213 - | ABC dipeptide transporter, ATPase subunit DppF DppD 2548792 - 2547968 - | ABC dipeptide transporter, ATPase subunit DppD DppC 2549795 - 2548893 - | ABC dipeptide transporter, inner membrane subunit DppC DppB 2550862 - 2549792 - | ABC dipeptide transporter, inner membrane subunit DppB DdpA 2552479 - 2550863 - | ABC dipeptide transporter, substrate-binding subunit DdpA TERM 1197 2552717 - 2552663 - H 78 -13.2 -3.57144 | overlap 2552645 GGCGCCACGGCGAAA GGCTCCACGCGCCGGGCGCAGGGGTC CGC GGCCCCTCCGCGCGCCGCAGGGCGGC GGGGCGATGGGCGCT RSP_0809 2552780 - 2553358 + | hypothetical protein TERM 1198 2553393 - 2553415 + G 72 -16.3 -2.74523 | overlap 2553391 CATAGGCCAGATCGG CGACCCGCC CTTCC GGCGGGTCG TGCTCTTCGGCATAG RSP_0810 2553355 - 2554047 + | hypothetical protein TERM 1199 2554091 - 2554068 - T 76 -13.8 -3.40403 | CCGCCCGGATCAGAA GGCCGGCTGC GGGG GCATCCGGCC CATCACGTCGATGTC RSP_0811 2554343 - 2554062 - | hypothetical protein RSP_0812 2554744 - 2554340 - | methylmalonyl-CoA epimerase TERM 1200 2554806 - 2554778 - H 74 -11 -3.72576 | gap 1, overlap 2554800 TGGCCCGTTATGAAA GCCGCCC-CCTGC CCGC GCAAGAGGGCAGC CCGTCGCGCGGACCT TERM 1201 2554883 - 2554912 + H 100 -7.7 -5.31275 | gap 1, overlap 2554876 2554882 TCCGCCCCGCCGGGC GCCGGC-ACCGGGC TTC GCTCGGACGGCGGC TTTTTTGTCATCGGG TERM 1202 2555658 - 2555697 + G 71 -16.5 -2.60763 | gap 3, overlap 2555661 CGCTCGACCTGCTCC GCCGGCTGATCGCCGTCCGC CTC GCGG-CGGCGG-C-GCCGGC CTTCTGACCTATGGA TERM 1203 2555661 - 2555698 + G 70 -13.4 -3.34962 | gap 2, overlap 2555658 TCGACCTGCTCCGCC GGCTGATCGCCGTCCGCC TCGC GGCGG-CGGCGC-CGGCC TTCTGACCTATGGAA RSP_0813 2555003 - 2555704 + | response regulator receiver protein RSP_0814 2556578 - 2555865 - | acetyltransferase aspS 2558357 - 2556582 - | aspartyl-tRNA synthetase TERM 1204 2557362 - 2557398 + g 86 -18 -3.29461 | opp_overlap 2557348 TTTCCGGCTGCCGCC CGTGGGCGCCGGGATC GCGCG GATCTCGGTGCCCTCG TTCTCGAGAAGCTTG RSP_0816 2559157 - 2558573 - | hypothetical protein RSP_0817 2560338 - 2559166 - | para-aminobenzoate synthase component I carB 2560500 - 2563829 + | carbamoyl phosphate synthase large subunit TERM 1205 2563831 - 2563874 + F 77 -18 -2.62184 | CCCTCCAGGGCTGAC GCGCCCGCGCCCCGGCCG CCATCGCC CGGCCGGGGCGCGCACCC TCCTCTCCCGCCCCG rhlE2 2564430 - 2565815 + | DEAD/DEAH box helicase TERM 1206 2565871 - 2565823 - f 74 -11.6 -3.79419 | overlap 2565821 2565832 GCGGCTGAGAAAAGA TGCATGGAACGCGGCCTGCTTC CTGGT GACGCAGGCCGCACTTCCGGCA GGCACTCGCATTCAG TERM 1207 2565862 - 2565832 - f 77 -14.7 -3.11103 | overlap 2565823 2565821 AAAAGATGCATGGAA CGCGGCCTGCTTC CTGGT GACGCAGGCCGCA CTTCCGGCAGGCACT RSP_6134 2566177 - 2566353 + | hypothetical protein RSP_0820 2566383 - 2566892 + | putative cytochrome B561 RSP_0821 2567702 - 2566932 - | esterase/lipase/thioesterase RSP_0822 2567790 - 2568167 + | hypothetical protein SHMT 2569530 - 2568235 - | serine hydroxymethyltransferase TERM 1208 2568397 - 2568448 + g 75 -15 -3.31144 | gap 1, opp_overlap 2568394, overlap 2568445 CGCCTCACCGAAGCC GCGGGTGGTGCCCGCGGGCGTGCCG AGC CGG-ACGCCCGAGGTCACGGTCGGC TTCTCGGGGTCGAAC TERM 1209 2568796 - 2568820 + g 70 -12.7 -3.38272 | overlap 2568798 GTTCGTGAGGATCAT GCCGCCGCGCG GAC CGCGCAGCGTC TTGTGCGTCGTGGTG TERM 1210 2568798 - 2568818 + g 70 -13.9 -3.25896 | overlap 2568796 TCGTGAGGATCATGC CGCCGCGCG GAC CGCGCAGCG TCTTGTGCGTCGTGG ppnK 2569697 - 2570461 + | inorganic polyphosphate/ATP-NAD kinase pth 2571135 - 2570458 - | peptidyl-tRNA hydrolase RSP_0826 2571267 - 2571581 + | hypothetical protein TERM 1211 2571738 - 2571703 - T 71 -3 -4.56775 | overlap 2571704 2571705 2571720 ATCTGTTTGGAAAAA TCCGGTCGCTGCAAGG ACGG CCGCGCTCCGACCGAC GCCCCTTGGGGCTCG TERM 1212 2571858 - 2571833 - T 100 -21.9 -4.8622 | opp_overlap 2571830 GCGCCCAACGAAAAA GGGCGCGGACC CTGC GGTCCGCGCCC CCATTCCGTCCGATG RSP_0827 2572493 - 2571882 - | 50S ribosomal protein L25/general stress protein Ctc TERM 1213 2572544 - 2572515 - H 75 -8.5 -4.2349 | gap 1 TCTCCATATGTAAAA CG-CCCCATCCTCC AAG GGTGCATGGGGTCG CGAGGCGCCGCCATA RSP_0828 2572791 - 2573948 + | major facilitator transporter lctB 2575116 - 2573953 - | lactate dehydrogenase RSP_0830 2576563 - 2575463 - | CBS domain-containing protein trpA 2577399 - 2576608 - | tryptophan synthase subunit alpha thi 2577668 - 2577453 - | thiamine biosynthetic protein RSP_0832 2577892 - 2578989 + | translation-associated GTPase xanB 2579330 - 2580784 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 1214 2581855 - 2581893 + G 90 -16.7 -3.68351 | gap 1 CTGGTGAGCCGCCAC GGCCGCCTCGCGGATCTG GTGG CGGA-CCGCAGGGCGGCC TTTCCCTCGTCGGGC manB 2580781 - 2582157 + | phosphomannomutase RSP_6136 2582403 - 2584784 + | hypothetical protein TERM 1215 2584800 - 2584832 + F 87 -19.9 -3.01712 | overlap 2584792 2584803 GCGTCTAGGCCTCTG GGACGGCCGCCCTTT GCG AGAGGGCGGCCGTCG TCTTGCGGAGGAGCG TERM 1216 2584803 - 2584829 + F 83 -20.2 -2.73875 | overlap 2584792 2584800 TCTAGGCCTCTGGGA CGGCCGCCCTTT GCG AGAGGGCGGCCG TCGTCTTGCGGAGGA RSP_0836 2584944 - 2586122 + | putative flavoprotein RSP_0837 2586792 - 2586097 - | hypothetical protein RSP_0838 2587890 - 2586898 - | DNA polymerase III, delta subunit RSP_0839 2588375 - 2587887 - | secreted periplasmic protein leuS 2590905 - 2588362 - | leucyl-tRNA synthetase RSP_0841 2591563 - 2590937 - | hypothetical protein TERM 1217 2591599 - 2591622 + H 72 -3.7 -4.58395 | TCCCGTGCTGTCTAG CCGAGGCAC CGGACC GTGCCAAGG TTTTTCAGGCATCCC TERM 1218 2592734 - 2592702 - g 71 -6.1 -4.19624 | opp_overlap 2592709, overlap 2592698 GACGTGCAAGACAAA GTCAAAGGCTGGGGC GTT GCCGCGGCTTATGAC CTCGGCGGCGGTCTG RSP_0842 2591847 - 2592839 + | putative porin TERM 1219 2592884 - 2592865 - T 74 -11.4 -3.75629 | opp_overlap 2592860 2592859 2592865 GATCCTGAACGGAAA GAGCGGGC TCCG GCCCACTC TTTTCATTTCCGCCT TERM 1220 2592865 - 2592884 + T 83 -9.2 -4.55128 | opp_overlap 2592865, overlap 2592860 2592859 GATCCTGAACGGAAA GAGCGGGC TCCG GCCCACTC TTTTCATTTCCGCCT RSP_6212 2594010 - 2592961 - | hypothetical protein RSP_0843 2594180 - 2595148 + | hypothetical protein RSP_0844 2595141 - 2595806 + | hypothetical protein RSP_0845 2596320 - 2595826 - | hypothetical protein ribA 2597405 - 2596317 - | GTP cyclohydrolase II RSP_0847 2597558 - 2598244 + | two component transcriptional regulator TERM 1221 2598362 - 2598382 + F 100 -15.4 -5.5604 | CTCCCTGTTGGATCT GGCCGGGC CTCGT GCCCGGCC TTTTTTCTTGCTTCG xthA1 2598593 - 2599381 + | exodeoxyribonuclease III RSP_6137 2600035 - 2599412 - | TetR family transcriptional regulator RSP_6138 2600215 - 2600087 - | hypothetical protein TERM 1222 2600389 - 2600373 - H 71 -2.1 -4.64598 | opp_overlap 2600373 GAATGACTCTAAAAA GGTGAGC CAT GTTCTCC TCATTCTCCAGCCGG RSP_0850 2600381 - 2601358 + | hypothetical protein TERM 1223 2602302 - 2602335 + G 81 -18.1 -3.04144 | gap 1 GTGAACGAGTTTCTG GCGCTGCTGGGCGGGG CGG CCACGCCCGGC-GCGC TCTTCGCCATCGGCG RSP_0851 2601717 - 2602646 + | AEC family transporter fghA 2602662 - 2603492 + | S-formylglutathione hydrolase RSP_0853 2603485 - 2603973 + | hypothetical protein RSP_0854 2603970 - 2604881 + | ornithine cyclodeaminase RSP_0855 2605530 - 2604886 - | hypothetical protein TERM 1224 2605319 - 2605302 - G 71 -8.4 -4.07568 | overlap 2605305 CCGCGCCCGCGAAAA GGACGG GCCAGG CCGTCC GCAGCGGCGCGAGCC btaA 2605905 - 2607155 + | S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase btaB 2607152 - 2607784 + | S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase RSP_0858 2609143 - 2608190 - | RhaT family transporter leuB 2610563 - 2609508 - | 3-isopropylmalate dehydrogenase RSP_0860 2611643 - 2610714 - | hypothetical protein RSP_0861 2612647 - 2611724 - | hypothetical protein TERM 1225 2612774 - 2612757 - R 100 -14.1 -4.7254 | overlap 2612743 AGGCGGGATGAAAAA GGCCGCC CGAA GGCGGCC CTGCATCTCAGGGTT leuD 2613404 - 2612799 - | isopropylmalate isomerase small subunit RSP_6139 2613932 - 2613408 - | hypothetical protein leuC 2615423 - 2613996 - | isopropylmalate isomerase large subunit RSP_0864 2615616 - 2616209 + | hypothetical protein RSP_0865 2616422 - 2616742 + | hypothetical protein RSP_0866 2616742 - 2617209 + | hypothetical protein rnhA 2617237 - 2617764 + | ribonuclease H RSP_0868 2617797 - 2618288 + | putative transcriptional regulator TERM 1226 2618430 - 2618415 - f 72 -6 -4.36914 | opp_overlap 2618410, overlap 2618416 CTTTCGGCGACAAAA TGGCGG CGAT CCGCCG GTCGCGGAGCCGTTA osp 2618532 - 2618894 + | response regulator receive protein RSP_0870 2619006 - 2619356 + | hypothetical protein patB 2620535 - 2619363 - | putative aminotransferase def1 2620676 - 2621209 + | peptide deformylase RSP_0873 2621209 - 2621700 + | N-formylmethionyl tRNA deformylase RSP_0874 2621697 - 2622200 + | formylmethionine deformylase fmt 2622204 - 2623112 + | methionyl-tRNA formyltransferase RSP_0876 2626660 - 2623205 - | chromosome segregation protein SMC2 RSP_0878 2626798 - 2627283 + | putative acetyltransferase protein RSP_0877 2628118 - 2627234 - | RhaT family transporter RSP_0879 2628915 - 2628115 - | hypothetical protein dadA 2628970 - 2630031 + | oxidoreductase TERM 1227 2630200 - 2630220 + T 80 -16.1 -3.18264 | overlap 2630201 CGAGACGCCACCCAT TGGGCGCCC ACG GGGCGCCCG TTCGTGGCTCGGAGG TERM 1228 2630201 - 2630219 + T 77 -17.4 -2.50816 | overlap 2630200 GAGACGCCACCCATT GGGCGCCC ACG GGGCGCCC GTTCGTGGCTCGGAG RSP_0881 2632225 - 2630264 - | putative soluble lytic transglycosylase TERM 1229 2631615 - 2631659 + g 75 -15 -3.28712 | gap 2, overlap 2631615 GCGAGCCGCTTCCAG CCG-TCCGA-CACGCGCGGCAG CAT CCGCCGCGCCTGCTCGGGCCGG TTCTCCCAGAGCAGC dapA 2632363 - 2633250 + | dihydrodipicolinate synthase TERM 1230 2633410 - 2633456 + F 100 -22.9 -3.66178 | overlap 2633400 CCGTGCCCCGTCCGC GGCAGCGCCGGGCGAGGGGGT TCGAT GCCCCCTCGCCCGGCTCCCCC TTTCCGCTTCGGGCG smpB 2633511 - 2633984 + | SsrA-binding protein TERM 1231 2634393 - 2634381 - g 71 -6.9 -4.25104 | TCTGCCGCAGGAAAA CCGCA ACC CGCGG GCCGAATACGAGGCC SseA 2634274 - 2635122 + | thiosulfate sulfurtransferase, rhodanese-like TyrB 2635130 - 2636314 + | aromatic amino acid aminotransferase TERM 1232 2636452 - 2636421 - T 100 -26 -4.66833 | CCTGAAGCGGAAAAA CGACAGGCCCGGAC CGTC GTCCGGGCCTGTCG CGGTCGGGCAGCGGG amtB 2637852 - 2636500 - | ammonium transporter glnK 2638217 - 2637879 - | nitrogen regulatory protein P-II MrcB 2638379 - 2640874 + | glycosyl transferase family protein TERM 1233 2640878 - 2640897 + T 82 -16.4 -3.34962 | opp_overlap 2640878 TCCCTGAACTGAAAA CGCCGCCC CAAG GGGCGGCG TTCTGCAGTCTCGGG TERM 1234 2640897 - 2640878 - T 100 -16.4 -4.27316 | opp_overlap 2640878 TCCCTGAACTGAAAA CGCCGCCC CAAG GGGCGGCG TTCTGCAGTCTCGGG RSP_0890 2641547 - 2640924 - | hypothetical protein TERM 1235 2641066 - 2641050 - G 72 -11.5 -3.63991 | GATGATGTTGAAGAA GGCCGGG CGG CCCGACC GGTCCGACACATGCC vacJ 2642325 - 2641537 - | putative lipoprotein RSP_0892 2642535 - 2644271 + | protein toxin ABC transporter ATPase and inner membrane subunit RSP_0893 2644268 - 2645569 + | RTX secretion protein D RSP_0894 2645693 - 2646151 + | hypothetical protein RSP_0895 2646151 - 2646921 + | phosphodiesterase-like RSP_0896 2646991 - 2648235 + | hypothetical protein RSP_0897 2648232 - 2648864 + | glutathione S-transferase DCOHM 2648857 - 2649135 + | pterin-4-alpha-carbinolamine dehydratase RSP_0899 2649777 - 2649289 - | thiol peroxidase (atypical 2-Cys peroxiredoxin) RSP_0900 2649878 - 2651083 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RSP_0901 2651080 - 2651634 + | N-6 adenine-specific DNA methylase RSP_0902 2651631 - 2652275 + | hydrolase, haloacid dehalogenase-like hydrolase RSP_0903 2652348 - 2653427 + | catalase TERM 1236 2654280 - 2654244 - g 87 -15.7 -3.63991 | opp_overlap 2654250 GAGCACGGTGAACAA CGCCCCCGCCCGGCAGG TCG CGCGCGAGACGGGGGCG GCCTACGGCGGCATG sitA 2653510 - 2654403 + | ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA sitB 2654400 - 2655293 + | ABC Mn+2/Fe+2 transporter, ATPase subunit SitB sitC 2655280 - 2656140 + | ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC sitD 2656137 - 2656985 + | ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD dctR 2657568 - 2656960 - | two component LuxR family transcriptional regulator dctS 2659550 - 2657565 - | PAS/PAC sensor signal transduction histidine kinase TERM 1237 2658450 - 2658490 + g 90 -15.9 -3.76402 | CTCGAAGGCCTGCGG CTCGGCGCCGCCCACGGCC AGC GCCCGCTGGCGGCGCAGGG TTTCCTCGATCCGGT dctP 2659690 - 2660694 + | TRAP dicarboxylate family transporter DctP subunit TERM 1238 2660709 - 2660739 + F 100 -18.2 -3.84451 | overlap 2660710 ACCCATCCGACCTCT CCCGGGCAGCCGGC CGC GCCGGCTGCCCGCC TTTCCCTTTCCCGCA TERM 1239 2660710 - 2660738 + F 87 -21.7 -2.90349 | overlap 2660709 CCCATCCGACCTCTC CCGGGCAGCCGGC CGC GCCGGCTGCCCGC CTTTCCCTTTCCCGC dctQ 2660780 - 2661463 + | TRAP dicarboxylate family transporter DctQ subunit dctM 2661465 - 2662790 + | TRAP dicarboxylate family transporter DctM subunit TERM 1240 2662819 - 2662858 + T 76 -14.2 -3.53012 | opp_overlap 2662820 2662821, overlap 2662820 GCGCCTTGACGGAGA ACCCGGACGCCTGCCGAC GGAA GTCGGCAGGCGTTCGACA TTTGCAGGGGGGCGC TERM 1241 2662857 - 2662820 - T 87 -17.7 -3.35679 | opp_overlap 2662819 2662820, overlap 2662821 CGCCTTGACGGAGAA CCCGGACGCCTGCCGAC GGAA GTCGGCAGGCGTTCGAC ATTTGCAGGGGGGCG TERM 1242 2662820 - 2662857 + T 78 -17.7 -2.71712 | opp_overlap 2662820 2662821, overlap 2662819 CGCCTTGACGGAGAA CCCGGACGCCTGCCGAC GGAA GTCGGCAGGCGTTCGAC ATTTGCAGGGGGGCG TERM 1243 2662856 - 2662821 - T 85 -21.2 -2.61264 | opp_overlap 2662820 2662819, overlap 2662820 GCCTTGACGGAGAAC CCGGACGCCTGCCGAC GGAA GTCGGCAGGCGTTCGA CATTTGCAGGGGGGC crt 2663536 - 2662916 - | enoyl-CoA hydratase RSP_0914 2664285 - 2663533 - | Short-chain dehydrogenase/reductase SDR TERM 1244 2665821 - 2665843 + G 81 -8.3 -4.59773 | GCAGGATCAGGCGAT GGCCGCGCG CATGA TGCTCGGCC TTTTTGCCCGTCCGG RSP_0915 2664409 - 2665938 + | hypothetical protein TERM 1245 2665942 - 2665972 + F 73 -16.1 -2.52543 | gap 1, opp_overlap 2665939 CGCCTCCAGTAAGCT CGGC-GCCCCCGCC CTGC GGCGGGGGCGGCCC TCCATTCCGCGGGAT pmbA 2666209 - 2667552 + | microcin-processing peptidase 1 RSP_0917 2667539 - 2668315 + | inositol monophosphatase RSP_0918 2668760 - 2668563 - | hypothetical protein RSP_0919 2668910 - 2669767 + | Short-chain dehydrogenase/reductase SDR TERM 1246 2670314 - 2670275 - g 71 -15.7 -2.64616 | GGCCGACGCACAGGA GGCC-CCGGCACCGGCGGG CGAG CCCGA-GGCGCCGGCGGCC GCGGGGGCAGATCCC TERM 1247 2670581 - 2670620 + G 76 -16.4 -3.14132 | gap 1 GGCCACGCTCGAGGA GGCGGTCCGGCGTCTTGCG GGG CGCAAGGATCCGG-CCGCC TTCATGGCGCGGGCG exbB 2670024 - 2671073 + | biopolymer transport protein, ExbB exbD 2671077 - 2671502 + | biopolymer transport protein, ExbD RSP_0922 2671499 - 2672383 + | putative TonB protein TERM 1248 2672552 - 2672527 - T 100 -14 -4.63218 | gap 1 CGGCCCGTAACAAAA GGCCCGC-GCC TCACG GGCAGCGGGCC TCGCTCCTCGGAAAG map1 2673458 - 2672577 - | methionine aminopeptidase, type I cinA 2673533 - 2674264 + | nucleotide-utilizing enzyme/competence-damage associated protein yobR 2674268 - 2674978 + | putative acetyl transferase RSP_0926 2674975 - 2675907 + | OmpA/MotB family protein lyrS 2676871 - 2675930 - | LysR family transcriptional regulator RSP_0928 2677985 - 2677461 - | hypothetical protein accD 2678351 - 2679304 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha folC 2679301 - 2680575 + | folylpolyglutamate synthetase TERM 1249 2680670 - 2680641 - T 70 -12.1 -3.34715 | gap 1, opp_overlap 2680645 2680647, overlap 2680639 2680642 CACTCTGCCCAAATA TCCCGCGGG-GGAG TCG CTCCGCCCGCAGGG CGGGGCGGCGGGGGC ialA 2681198 - 2680710 - | NUDIX hydrolase ctpA 2682552 - 2681206 - | S41 family peptidase RSP_0933 2683672 - 2682560 - | hypothetical protein gpmI 2685189 - 2683669 - | phosphoglyceromutase RSP_0935 2686497 - 2685220 - | MiaB-like radical SAM protein dapF 2687324 - 2686494 - | diaminopimelate epimerase RSP_0937 2687731 - 2689377 + | alpha amylase domain-containing protein RSP_0938 2689471 - 2689698 + | hypothetical protein TERM 1250 2689826 - 2689790 - f 100 -24.5 -4.07246 | gap 1, overlap 2689793 GGACGGGAAATGAAA GCAGGCGCGGGCGCGG CATCCT CCGCGCCCGCGCC-GC TTCGGCAGATGCCCG TERM 1251 2689824 - 2689793 - f 100 -25.9 -3.0693 | overlap 2689790 CGGGAAATGAAAGCA GGCGCGGGCGCGG CATCCT CCGCGCCCGCGCC GCTTCGGCAGATGCC TERM 1252 2690002 - 2689975 - g 70 -13.4 -3.28712 | gap 1 GGGGCTGCCGCAGAA GCGCGAGCTCGGC CAC GCCGC-CTCGCGC CTGACCACCCTCGAG RSP_0939 2689898 - 2690677 + | hypothetical protein RSP_0940 2690826 - 2691833 + | ABC transporter, periplasmic substrate binding protein RSP_0941 2691891 - 2692784 + | ABC transporter, ATPase subunit RSP_0942 2692784 - 2693548 + | ABC transporter, inner membrane subunit yhxA 2693657 - 2695039 + | aminotransferase purU 2695350 - 2696234 + | formyltetrahydrofolate deformylase TERM 1253 2696301 - 2696261 - T 79 -15.4 -3.34517 | gap 2, opp_overlap 2696271, overlap 2696259 ATTCTGGCCGAAATA TCCCGGG--GGTGCGGGGGC AGC GCCCCCGCTCCTTCCCGTGA CGCTCAGGTCAGATC TERM 1254 2696271 - 2696289 + T 78 -17.4 -2.73364 | opp_overlap 2696261 2696259 AAATATCCCGGGGGT GCGGGGGC AGC GCCCCCGC TCCTTCCCGTGACGC RSP_0945 2697930 - 2696305 - | major facilitator transporter RSP_0946 2698229 - 2699263 + | putative DNA topoisomerase I protein TERM 1255 2699384 - 2699345 - T 83 -8.4 -4.59773 | overlap 2699348 2699349 TCCGATGGCGAAAAA CAATTGCGCCGCGCCG GGGAGCGA CGGCGCGGCGCAGGCC TCGCTCGCGCGGATC TERM 1256 2699381 - 2699348 - T 100 -16.7 -4.41633 | overlap 2699345 2699349 GATGGCGAAAAACAA TTGCGCCGCGCCG GGGAGCGA CGGCGCGGCGCAG GCCTCGCTCGCGCGG TERM 1257 2699380 - 2699349 - T 90 -20.2 -3.24256 | overlap 2699348 2699345 ATGGCGAAAAACAAT TGCGCCGCGCCG GGGAGCGA CGGCGCGGCGCA GGCCTCGCTCGCGCG RSP_0947 2699583 - 2699398 - | hypothetical protein TERM 1258 2699664 - 2699650 - H 76 -7 -4.36914 | opp_overlap 2699657, overlap 2699651 CCTCTGCGCAGAAAA CCGCGC CGC GCGCGC CCGGTTCCCGCGGCG TERM 1259 2699681 - 2699697 + H 78 -10.1 -4.18018 | overlap 2699657 2699676 CGGTTCCCGCGGCGG CTCGCCT TTC GGGCGAG TTTTCCGTGACAGGC RSP_6141 2699839 - 2700363 + | hypothetical protein otsA 2701828 - 2700416 - | OtsA trehalose-6-phosphate synthase TERM 1260 2701750 - 2701778 + g 75 -14.6 -3.40403 | gap 1 CGGCATGGACGGCGA CGGCCAGCCCGCC GGGC GGCGGGTTG-CCG TTCTCGTCCGGCAGC ostB 2702607 - 2701825 - | putative trehalose-6-phosphate phosphatase TERM 1261 2702716 - 2702692 - R 73 -7.8 -4.21275 | gap 1, opp_overlap 2702692 CGAACTCATGGAAAA GGC-GCTCCGC GAGG GCGGAGGAGCC TTGTTCCGCGGGGAT RSP_0950 2704384 - 2702774 - | arginine utilization protein RocB RSP_0951 2704950 - 2704729 - | hypothetical protein TERM 1262 2704939 - 2704962 + g 91 -16.7 -3.84451 | opp_overlap 2704915 2704939 2704932 2704934 CACCAGAAGATCACA GGGCGCCGC CACGCA GCGGCGCCC TTTCCGTTTCCGGGG TERM 1263 2704962 - 2704939 - G 77 -17.4 -2.9544 | opp_overlap 2704939, overlap 2704915 2704932 2704934 CACCAGAAGATCACA GGGCGCCGCC ACGC AGCGGCGCCC TTTCCGTTTCCGGGG RSP_0952 2705866 - 2704982 - | transglutaminase-like protein RSP_0953 2708251 - 2705867 - | hypothetical protein TERM 1264 2708078 - 2708044 - G 70 -13.4 -3.38991 | overlap 2708042 ACTGGCGGAAGAACA CGCCCGCATCGCGCAG ATA CTGGTCGCCGCGGGCG AAGCGGCGGTGGAGA RSP_0954 2711772 - 2708251 - | transglutaminase-like domain-containing protein TERM 1265 2711716 - 2711662 - G 100 -14.9 -5.00616 | overlap 2711689 2711690 GGCGCGGCGAAAAAA CCGGCGGCGCGGG-GCGGAGCGCCCAA ATC CTGTGCG-TCCGCGCCCGAGAGGCCGG GGCCGCACCCGCGCA RSP_0955 2713379 - 2711808 - | 5'-nucleotidase RSP_0956 2713538 - 2713876 + | hypothetical protein pyrD 2713873 - 2714937 + | dihydroorotate dehydrogenase 2 RSP_0958 2715345 - 2715109 - | AsnC family transcriptional regulator RSP_0959 2717317 - 2715617 - | ATPase TERM 1266 2717516 - 2717480 - R 82 -10.8 -4.17491 | gap 1, overlap 2717486 AGTAAATCCTTAAAA TGCAAAGCCGCCGCGGC CGGG GCCACGGCGGCTGAG-A CTTGCGGATCGCTCC TERM 1267 2717511 - 2717486 - R 100 -19.7 -3.92659 | overlap 2717480 TCCTTAAAATGCAAA GCCGCCGCGGC CGGG GCCACGGCGGC TGAGACTTGCGGATC RSP_0960 2718826 - 2717534 - | alcohol dehydrogenase TERM 1268 2717593 - 2717630 + g 77 -10.5 -4.08939 | gap 1, overlap 2717560 GCCCCGTGCGCGGGG CCTGCACCAGCACCGCCA TGT TGCCGG-GCTTGTGCTGG TTTCTGTACATCTTC TERM 1269 2718970 - 2718992 + H 72 -9 -4.07885 | overlap 2718945 GCAACGCAGCGTCAC CGCGGGCGGG TCC CTTTCCCGCG TTTTCCGGCCAGGTG MeaA 2719198 - 2721156 + | methylmalonyl-CoA mutase TERM 1270 2721238 - 2721272 + T 95 -17.9 -3.73402 | gap 1, overlap 2721238 2721241 GGGCGAGGCGAAGGG CG-TGACGCCTGGCCC CGCG GGGCCAGGCGTCTCCG TTTGGTGAGCGGTCT TERM 1271 2721238 - 2721271 + T 80 -18.1 -2.8372 | overlap 2721238 2721241 GGGCGAGGCGAAGGG CGTGACGCCTGGCCC CGCG GGGCCAGGCGTCTCC GTTTGGTGAGCGGTC TERM 1272 2721241 - 2721268 + T 86 -22.8 -2.67803 | overlap 2721238 2721238 CGAGGCGAAGGGCGT GACGCCTGGCCC CGCG GGGCCAGGCGTC TCCGTTTGGTGAGCG TERM 1273 2721342 - 2721307 - T 78 -14.1 -3.54459 | gap 1, opp_overlap 2721308, overlap 2721308 2721312 GGAAGGCCCCCGAAA GCGA-AGGGACCGGTC GGGGG GACCGGTCCCTGTCGT TCCTCGCGGAAGGGA TERM 1274 2721308 - 2721341 + T 85 -17.6 -3.14132 | gap 1, opp_overlap 2721308 2721307 2721312 GAAGGCCCCCGAAAG CGA-AGGGACCGGTC GGGGG GACCGGTCCCTGTCG TTCCTCGCGGAAGGG TERM 1275 2721341 - 2721308 - T 78 -17.6 -2.72461 | gap 1, opp_overlap 2721308, overlap 2721307 2721312 GAAGGCCCCCGAAAG CGA-AGGGACCGGTC GGGGG GACCGGTCCCTGTCG TTCCTCGCGGAAGGG TERM 1276 2721336 - 2721312 - T 87 -17.2 -3.27525 | opp_overlap 2721308, overlap 2721308 2721307 GCCCCCGAAAGCGAA GGGACCGGTC GGGGG GACCGGTCCC TGTCGTTCCTCGCGG RSP_0962 2722746 - 2721358 - | dihydrolipoamide dehydrogenase RSP_0963 2723256 - 2722861 - | inner membrane protein TERM 1277 2723275 - 2723305 + r 77 -15.5 -3.17392 | gap 2, overlap 2723277 GGTCCCCGGACGCGC G-C-GGGCCCCGGGA CGG TCCCGGGGCCCTGAC TTCGGTTCAGAGGTC TERM 1278 2723277 - 2723301 + r 86 -22.9 -2.57013 | overlap 2723275 TCCCCGGACGCGCGC GGGCCCCGGGA CGG TCCCGGGGCCC TGACTTCGGTTCAGA sucB 2724844 - 2723312 - | dihydrolipoamide acetyltransferase kgd 2727807 - 2724844 - | alpha-ketoglutarate decarboxylase sucD 2728746 - 2727862 - | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 1279 2728022 - 2728066 + g 76 -11.4 -3.84406 | gap 2, opp_overlap 2728039, overlap 2728057 CGGCCCGGAGGCGCC GTGCGGCCGGCGATGAAGCCCG CGG TGGGCTTCCA-G-CGGCCGCGC TTCTTCTCGTCGGCG sucC 2729944 - 2728751 - | succinyl-CoA synthetase subunit beta TERM 1280 2730150 - 2730127 - R 100 -21 -5.27938 | ACGCTTAAAGAAAAA GGCGCGCCGG AGAT CCGGCGCGCC CTGTGAAACTGCGTT mdh 2731136 - 2730174 - | malate dehydrogenase RSP_0969 2731339 - 2732076 + | putative integral membrane protein RSP_0970 2732163 - 2733020 + | putative citrate lyase beta chain RSP_0971 2733029 - 2733583 + | hypothetical protein RSP_0972 2733580 - 2733783 + | hypothetical protein RSP_0973 2733784 - 2734815 + | MaoC family protein TERM 1281 2734886 - 2734852 - f 71 -11.6 -3.56092 | opp_overlap 2734849 GCATGATTGCGCAAA CATGTGATCACAGG CCCGCAT CTTGTGATCACATG ACGAATTTTTTTGGG RSP_0974 2735026 - 2735409 + | succinate dehydrogenase subunit C RSP_0975 2735421 - 2735792 + | succinate dehydrogenase subunit D sdhA 2735804 - 2737606 + | succinate dehydrogenase flavoprotein subunit RSP_0977 2737606 - 2737926 + | hypothetical protein RSP_0978 2737930 - 2738208 + | hypothetical protein sdhB 2738227 - 2739006 + | succinate dehydrogenase iron-sulfur subunit TERM 1282 2739003 - 2738982 - T 81 -2.3 -4.98531 | gap 1 CGCCGAAATCAAAAA GATGATG-GT CGA ACGCGTCATC TGACGTCCAGCGGCG TERM 1283 2739199 - 2739217 + T 74 -13.1 -3.61398 | opp_overlap 2739211 CACCGGGGCGGCGGA GGGGGGC AGACA GCCCCCC TTCTTCGCCAAAAGA TERM 1284 2739265 - 2739231 - T 90 -13.6 -4.07568 | opp_overlap 2739236, overlap 2739211 2739236 CCTTCTTCGCCAAAA GAGAAGCCTCCGCG GGGAGGA CGCGGAGGCTTTCC GGCAGCAGAAGCCGC TERM 1285 2739260 - 2739236 - T 86 -14.3 -3.95435 | opp_overlap 2739236, overlap 2739211 2739231 TTCGCCAAAAGAGAA GCCTCCGCG GGGAGGA CGCGGAGGC TTTCCGGCAGCAGAA TERM 1286 2739236 - 2739260 + T 76 -14.3 -3.53012 | opp_overlap 2739211 2739236 2739231 TTCGCCAAAAGAGAA GCCTCCGCG GGGAGGA CGCGGAGGC TTTCCGGCAGCAGAA RSP_6142 2739654 - 2739292 - | hypothetical protein RSP_0981 2740436 - 2739750 - | GntR family transcriptional regulator RSP_0982 2741119 - 2740433 - | zinc metallopeptidase-like protein TERM 1287 2741068 - 2741054 - G 71 -7 -4.18494 | opp_overlap 2741062, overlap 2741055 CACGCGCAGCGAAAA GCGCCG GGC CTGCGC CGAGCGGCGCAGCGT TERM 1288 2741184 - 2741168 - H 71 -2.1 -4.57353 | overlap 2741169 2741179 CCGGAGCAGAGAAAA GCCCTGA AAA TCCGGGG AAACGCGGGGGTCGG RSP_0983 2741231 - 2741611 + | hypothetical protein RSP_6143 2742068 - 2742322 + | hypothetical protein TERM 1289 2742351 - 2742371 + T 100 -19.7 -4.00532 | CCGACCGGATGATGA GGCCCCGCG ATC CGCGGGGCC TTTGGTCTTTCCGGG RSP_0985 2744087 - 2742390 - | adenine deaminase RSP_0987 2744222 - 2745178 + | RarD family transporter frcK 2745771 - 2745175 - | putative fructose transport system kinase RSP_0988 2746544 - 2745768 - | ABC sugar transporter, ATPase subunit RSP_0989 2747635 - 2746544 - | ABC sugar transporter, inner membrane subunit RSP_0990 2748832 - 2747810 - | ABC sugar transporter, periplasmic sugar binding subunit RSP_0991 2749030 - 2750253 + | ROK family transcriptional regulator TERM 1290 2751736 - 2751748 + G 73 -10.5 -3.86015 | GGGCTTCGGCATGTG GGCGG CCC CCGCC TTTCTCGCGGCGCTC phaA/B 2750378 - 2753227 + | putative monovalent cation/H+ antiporter subunit A phaC 2753227 - 2753562 + | putative monovalent cation/H+ antiporter subunit C phaD 2753559 - 2755070 + | putative monovalent cation/H+ antiporter subunit D phaE 2755067 - 2755558 + | putative monovalent cation/H+ antiporter subunit E phaF 2755555 - 2755824 + | pH adaption potassium efflux system, PhaF subunit phaG 2755830 - 2756216 + | pH adaption potassium efflux system, PhaG subunit nhaD 2756350 - 2757648 + | Na+/H+ antiporter, NhaD RSP_0999 2758255 - 2757701 - | hypothetical protein RSP_1000 2758394 - 2759191 + | hypothetical protein RSP_1001 2760150 - 2759368 - | hypothetical protein pyrB 2760267 - 2761229 + | aspartate carbamoyltransferase catalytic subunit pyrC 2761226 - 2762503 + | dihydroorotase RSP_1004 2762724 - 2763329 + | acyl-phosphate glycerol-3-phosphate acyltransferase gshA 2764797 - 2763433 - | putative glutathione synthetase RSP_1006 2765416 - 2764850 - | hypothetical protein RSP_1007 2766186 - 2765413 - | hypothetical protein ubiA 2766198 - 2767199 + | prenyltransferase TERM 1291 2769156 - 2769118 - g 91 -18 -3.72576 | overlap 2769130 CGGTCGTGGAGGAAA CGGCGGAAGCCACGCCGT CCG ACGGCGCGGAGGCCGCCG CGGACGACGAACCCT TERM 1292 2769165 - 2769130 - g 71 -16.2 -2.53392 | gap 1, overlap 2769118 AAACGGCGGAAGCCA CGCCGTCCGACGGCG CGGAGGC CGCCG-CGGACGACG AACCCTCGGCGGCGC RSP_1009 2767269 - 2769227 + | OmpA family outer membrane protein RSP_1011 2769347 - 2769670 + | hypothetical protein RSP_1010 2770511 - 2769657 - | esterase/lipase/thioesterase TERM 1293 2769833 - 2769813 - G 70 -13.9 -3.25823 | overlap 2769794 CGCCTGCCACAGGAA GGCGGGCCG CTC CTGCCCGCC CACATGGACGGTGAC gabD4 2770541 - 2772076 + | succinate semialdehyde dehydrogenase TERM 1294 2772089 - 2772123 + F 75 -10.6 -4.07885 | overlap 2772093 TGAGGCGGATCCGAC GCGCCCCTGCCCGG CATCCGT CCGGGCAGGGTTCC TTTTCCCAAGGGCTC TERM 1295 2772093 - 2772119 + F 85 -16.6 -3.66908 | overlap 2772089 GCGGATCCGACGCGC CCCTGCCCGG CATCCGT CCGGGCAGGG TTCCTTTTCCCAAGG RSP_1013 2772141 - 2773415 + | hemolysin RSP_1014 2773458 - 2773997 + | sigma24 RSP_1015 2773994 - 2775949 + | von Willebrand (VWA) domain-containing protein TERM 1296 2776180 - 2776157 - T 100 -17.4 -4.39568 | AGGCACACAGCAAAA GGAGCGCGCC TTGC GGCGCGCCCC CGAACGACATCGACA RSP_1016 2776678 - 2776202 - | small heat shock protein RSP_1017 2777791 - 2776973 - | hypothetical protein RSP_1018 2779126 - 2777825 - | glycolate oxidase iron-sulfur subunit RSP_1019 2780215 - 2779139 - | putative glycolate oxidase subunit protein glcD 2781713 - 2780280 - | putative glycolate oxidase subunit protein RSP_6144 2784618 - 2782444 - | hypothetical protein RSP_1021 2781795 - 2782550 + | hypothetical protein RSP_1022 2787392 - 2784615 - | hypothetical protein RSP_1023 2788264 - 2787392 - | hypothetical protein RSP_1024 2789277 - 2788261 - | putative MoxR family protein TERM 1297 2788986 - 2788963 - G 70 -13.8 -3.14132 | CGGCCCCTCGATGAA GCGGAAGGCG CGCG CGCCGTCCGC GCCCATGTCGAGCAC RSP_1025 2789360 - 2789926 + | hypothetical protein RSP_1026 2789923 - 2790147 + | hypothetical protein RSP_1027 2790207 - 2790425 + | hypothetical protein TERM 1298 2790754 - 2790720 - g 79 -15.6 -3.29144 | CTACCCGCTCTACAA GGCGCAGCGCCCCGAG CCG CCCGAGGATCTGCGCC CGCAGTTCCCGCTCA TERM 1299 2792320 - 2792304 - g 72 -11.5 -3.6968 | CCAGAAGGGCAAGAA CGGCGCC TGG GGCACCG GGGCCGACGTGCTCG RSP_1028 2790472 - 2793285 + | DNA polymerase I RSP_1029 2793808 - 2793413 - | histidine triad (HIT) protein RSP_1030 2795259 - 2794267 - | pfkB family carbohydrate kinase RSP_1031 2795900 - 2795256 - | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III RSP_1032 2796013 - 2796861 + | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada RSP_1033 2796976 - 2797662 + | OmpA family protein TERM 1300 2798075 - 2798116 + G 71 -7.1 -4.25104 | overlap 2798035 2798103 ACGCCATCGCCGAGC TGCAGGAGCGCGGGCTC CTCGTCTC GCGGCCGGGCTCCGGCA TTTTCGTGGCAGAGG pdhR 2797903 - 2798670 + | GntR family transcriptional regulator TERM 1301 2798829 - 2798863 + T 84 -16.5 -3.48276 | gap 1, opp_overlap 2798835, overlap 2798835 CGGCTCGTGAGCCAT GACAAAGGCCCGGTCC TCGC GGACCGGGCCCT-GTC TTGTCTGAGGCAAGG TERM 1302 2798858 - 2798835 - T 100 -19.6 -3.97947 | opp_overlap 2798829 2798835 GTGAGCCATGACAAA GGCCCGGTCC TCGC GGACCGGGCC CTGTCTTGTCTGAGG TERM 1303 2798835 - 2798858 + T 82 -19.6 -2.53249 | opp_overlap 2798835, overlap 2798829 GTGAGCCATGACAAA GGCCCGGTCC TCGC GGACCGGGCC CTGTCTTGTCTGAGG atpF 2799445 - 2798882 - | F0F1 ATP synthase subunit B TERM 1304 2799408 - 2799374 - G 70 -13.4 -3.28912 | overlap 2799375 CGACAGCGACAGGAA CGGCCCCGTGGCCGCC ATC GCCGGCGACGCGGCCA GCACCGCGAGGATCG atpX 2799984 - 2799442 - | F0F1 ATP synthase subunit B' atpE 2800290 - 2800054 - | F0F1 ATP synthase subunit C atpB 2801086 - 2800343 - | F0F1 ATP synthase subunit A atpI 2801467 - 2801132 - | FoF1 ATP synthase, subunit I RSP_1040 2801666 - 2802028 + | ArsR family transcriptional regulator RSP_1041 2803568 - 2802063 - | malonyl-CoA synthase RSP_1042 2804405 - 2803596 - | hypothetical protein TERM 1305 2804579 - 2804559 - R 100 -19.7 -4.27316 | CCCCCCAATGCAAAA GGGCGCGCC CGA GGCGCGCCC TTCGCAGACGTGGGG rpmE 2804823 - 2804602 - | 50S ribosomal protein L31 TERM 1306 2804804 - 2804815 + g 80 -3.6 -4.8048 | ATCATGTGGTAGTCG GGGT GGAT GCCC TTTTTCATGTCCGCC rplS 2805210 - 2804836 - | 50S ribosomal protein L19 trmD 2806095 - 2805259 - | tRNA (Guanine37-N(1)-) methyltransferase TERM 1307 2805493 - 2805462 - G 70 -10.2 -3.77832 | gap 1, overlap 2805459 GCGGAAATTCAAGAA GTCCCTCCGAAAAGG ATT CCTCTTCGGTGG-AC GCATGATTCCCGAGC RSP_1046 2807020 - 2806154 - | hypothetical protein rimM 2807682 - 2807173 - | 16S rRNA processing protein RimM TERM 1308 2807457 - 2807439 - G 74 -10.2 -4.03234 | opp_overlap 2807439 2807437 2807446 CGCGGTCGACATAAA GCCCCACG CCG CGCAGGGC GTCGGCCTCTTCCTT TERM 1309 2807744 - 2807705 - R 100 -19.2 -3.92659 | gap 1, overlap 2807699 2807706 CCCGGAAAATGCAAA GGGTCGGCGGGACGCGCCC GGA GGCCGCGCCCCGCCG-CCG TGGATCCGGGCAGCC TERM 1310 2807743 - 2807706 - R 89 -22.7 -2.95113 | gap 1, overlap 2807705 2807699 CCGGAAAATGCAAAG GGTCGGCGGGACGCGCCC GGA GGCCGCGCCCCGCCG-CC GTGGATCCGGGCAGC TERM 1311 2807760 - 2807813 + r 81 -12.1 -3.9461 | overlap 2807761 2807793 TGGATCCGGGCAGCC CGCCGAACGGGCCGCGCTCACGATC ACTC GGCCGAAGCCGCGGCCCGGTCGGCC TTCTTCTTGGCCAGC TERM 1312 2807761 - 2807812 + r 72 -15.6 -2.96444 | overlap 2807760 2807793 GGATCCGGGCAGCCC GCCGAACGGGCCGCGCTCACGATC ACTC GGCCGAAGCCGCGGCCCGGTCGGC CTTCTTCTTGGCCAG rpsP 2808133 - 2807783 - | 30S ribosomal protein S16 pheAa 2808472 - 2808173 - | chorismate mutase RSP_1050 2809071 - 2808511 - | acetyltransferase TERM 1313 2808914 - 2808866 - G 91 -17.3 -3.87075 | overlap 2808867 ACCATGCGGCAGAAA TCGTTCCAGGCCTCGGCGGGC GCCATCG GCCCGCCGAGGCCCAGCCCGC GGTCTGAGCCCACGA TERM 1314 2808913 - 2808867 - G 90 -20.8 -2.91924 | overlap 2808866 CCATGCGGCAGAAAT CGTTCCAGGCCTCGGCGGGC GCCATCG GCCCGCCGAGGCCCAGCCCG CGGTCTGAGCCCACG RSP_1051 2809598 - 2809068 - | hypothetical protein RSP_1052 2810131 - 2809595 - | acetyltransferase TERM 1315 2810185 - 2810210 + r 75 -6.7 -4.45068 | overlap 2810186 GGCGGGGAGGCTCGC GGAGGCGGGGC GCAC GGCCTGCCTCA TTTCTTCTTGCCCAT ffh 2811725 - 2810208 - | signal recognition particle subunit FFH/SRP54 (srp54) TERM 1316 2811822 - 2811788 - R 82 -14.2 -3.68359 | CGGCGAAAATCACAA CGGCACCCATGGGCGC ATC GCGCTGATGGGTGGCG ATCCCGGTCGTGCAC TERM 1317 2811942 - 2811965 + r 95 -17.4 -3.72576 | opp_overlap 2811942 GCAGCCCATGCAAAA GGCGCGTCCC TTGC GGGGCGCGCC TTTCCTCCGGCGGGA TERM 1318 2811965 - 2811942 - R 95 -15.2 -4.1899 | opp_overlap 2811942 GCAGCCCATGCAAAA GGCGCGTCCC TTGC GGGGCGCGCC TTTCCTCCGGCGGGA RSP_6230 2812506 - 2812006 - | hypothetical protein TERM 1319 2812521 - 2812549 + H 71 -11 -3.60151 | gap 1 TCTCATGTCTCCTGC TGGGCCG-TCCGC CCCT GCGGATCGGCCGA TTATCCTTTGCGGGC RSP_1055 2812669 - 2813598 + | LysR family transcriptional regulator TERM 1320 2813874 - 2813900 + T 72 -5.2 -4.4648 | opp_overlap 2813874 GCCCTTCTGCGAAAG GCGTCAGAG-CC TTGCC GGTCTC-GACGC TTTTCTGATGCGGCT RSP_1056 2815512 - 2814112 - | periplasmic sensor signal transduction histidine kinase merA1 2816982 - 2815570 - | putative mercuric reductase protein RSP_1058 2817711 - 2816983 - | hypothetical protein rpmH 2817892 - 2818026 + | 50S ribosomal protein L34P TERM 1321 2818111 - 2818053 - g 89 -22.3 -2.64616 | gap 1 GGCCCAGTGACATGA CGCCGCCGGAG-GCCGGAGGGACAGGCA GCGA TGCCGCGCCCGCCGGATCTCCGGCGGCG TCGGCACATCCCGCC rnpA 2818049 - 2818462 + | ribonuclease P protein component RSP_1061 2818459 - 2818713 + | hypothetical protein RSP_1062 2818740 - 2819618 + | PP family ATPase RSP_1063 2819692 - 2821218 + | diguanylate cyclase/phosphodiesterase TERM 1322 2821484 - 2821458 - g 70 -9.3 -3.76224 | TCGCGACGCAGCAAA CCGCCGTGGCC CCCTC GGCCACCCCGG ATGCTCCGACGACCG RSP_1064 2821328 - 2823199 + | putative inner membrane protein translocase component YidC TERM 1323 2823243 - 2823265 + G 95 -19.2 -3.60151 | opp_overlap 2823237 CCCGATCAAGGCCCA CGGACGCGAG GAA CTCGCGTCCG TTCTGCTTTCGCCGG RSP_1065 2823196 - 2823939 + | hypothetical protein RSP_1066 2823936 - 2824589 + | GTPase EngB fixR 2825369 - 2824593 - | Short-chain alcohol dehydrogenase argB 2825457 - 2826338 + | acetylglutamate kinase RSP_1069 2826338 - 2826982 + | hypothetical protein RSP_1070 2826979 - 2827485 + | hypothetical protein moaE 2828009 - 2827569 - | molybdopterin synthase subunit MoaE moaD 2828259 - 2828011 - | molybdopterin synthase subunit MoaD pgsA 2828921 - 2828256 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 2830872 - 2829001 - | excinuclease ABC subunit C RSP_1075 2831975 - 2831175 - | short chain dehydrogenase sohB 2832927 - 2832130 - | S49 family peptidase TERM 1324 2832311 - 2832287 - G 76 -17.1 -2.78463 | AGCTTGGGCACCAGA TGGGCCACGCC GTC GGCGAGGCCCA GACGCACCGCTTCCT RSP_1077 2833404 - 2834294 + | LysR family transcriptional regulator fdsG 2834395 - 2834868 + | formate dehydrogenase subunit gamma fdsB 2834865 - 2836394 + | NAD dependent formate dehydrogenase, beta subunit (51 kDa) TERM 1325 2838581 - 2838571 - g 81 -8.2 -4.57073 | CATGGCGCCGAAAAA CGGC TTC GCCG ACTGGGAAGTGACGC fdsA 2836391 - 2839273 + | NAD-dependent formate dehydrogenase, alpha subunit fdsC 2839270 - 2840085 + | formate dehydrogenase accessory protein fdsD 2840075 - 2840296 + | formate dehydrogenase delta subunit RSP_6146 2840527 - 2840318 - | hypothetical protein RSP_1084 2840745 - 2841962 + | putative glycosyl transferase, group 1 family protein RSP_1083 2842645 - 2841944 - | two component transcriptional regulator RSP_6231 2843277 - 2842663 - | hypothetical protein TERM 1326 2843627 - 2843581 - g 87 -20 -3.06696 | opp_overlap 2843579 TCTTCGGCGAATATA CCGTCCTGCGCGAATGGGGCCG TCG CAGCCCCGGCCGCGCCGGACGA CGTCTCGTCACATGG RSP_1085 2843493 - 2843738 + | hypothetical protein sdh 2843735 - 2844790 + | saccharopine dehydrogenase (NAD+, L-lysine-forming) RSP_1087 2845574 - 2844837 - | short-chain dehydrogenase/reductase family protein RSP_1088 2846131 - 2845571 - | hypothetical protein RSP_1089 2847340 - 2846135 - | sugar/cation symporter RSP_1090 2848086 - 2847337 - | putative cyclopropane/cyclopropene fatty acid synthesis protein RSP_1091 2849389 - 2848097 - | putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase TERM 1327 2849429 - 2849455 + H 72 -4.3 -4.58395 | gap 1, opp_overlap 2849420 CAGATACGGACTGTC GCCCAAGGCGGA TCAG TCCGCCC-GCGC TTTTTCCCGCCTCCC rpoE 2849604 - 2850149 + | RNA polymerase sigma factor RpoE chrR 2850158 - 2850799 + | anti-sigma factor ChrR RSP_1094 2851991 - 2850855 - | hypothetical protein mutL 2853900 - 2852002 - | DNA mismatch repair protein TERM 1328 2853193 - 2853151 - G 75 -14.1 -3.53811 | CGCATTCTCGGCAAA CTCCGCCC-CCACCACCCGCG CCA CGCGG-CGGTGGAGGGCGTCG AACAGATCGCCCCCT RSP_1096 2855244 - 2853937 - | putative zinc protease RSP_1097 2856587 - 2855241 - | putative zinc protease RSP_1098 2857194 - 2856667 - | hypothetical protein LspA 2857805 - 2857248 - | signal peptidase II purH 2859396 - 2857807 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase RSP_1101 2861137 - 2859434 - | hypothetical protein RSP_6147 2862436 - 2861171 - | rRNA methyltransferase RsmB-like RSP_1104 2862457 - 2862645 + | hypothetical protein TERM 1329 2862759 - 2862733 - T 72 -9.2 -3.9941 | overlap 2862734 TGGGCCAGAATGAAA GGGCCGCGGGGC GGG GCCGCGCGCGCC ATCCGGGGGCTCCGG DapB 2863667 - 2862858 - | dihydrodipicolinate reductase TERM 1330 2863785 - 2863742 - H 70 -13 -3.32844 | gap 1 GTCGCCATGCGAGAA GGGTGGGCAGAGGAACCGGGC ACC GCCCGCGTCC-CTGCACGCCC CTCCGCATGGGCCCG rbfA 2863905 - 2864327 + | ribosome-binding factor A RSP_1107 2864317 - 2865054 + | hypothetical protein truB 2865122 - 2866027 + | tRNA pseudouridine synthase B cysK 2866248 - 2867324 + | cysteine synthase RSP_1110 2867723 - 2868235 + | hypothetical protein rpsO 2868476 - 2868745 + | 30S ribosomal protein S15 TERM 1331 2868754 - 2868771 + F 100 -14.1 -4.4261 | CCGCTGACCTTGAAG CGCGCCC TGCG GGGCGCG TTTTCCTATTCCGGA TERM 1332 2869130 - 2869153 + G 82 -14.6 -3.61398 | gap 1, opp_overlap 2869121 CAGGAACGCTACTAT GCCG-CGGGCA AGG TGCCCGGCGGC TTCTTCAAGCGCGAG TERM 1333 2871042 - 2871021 - g 70 -9.3 -3.78775 | overlap 2871022 TGGTCGATCAGGAAA CCGGGCAGG AGAT CCAGCCCGA GAAGAAAGAGAAGGA Pnp 2868926 - 2871076 + | polynucleotide phosphorylase/polyadenylase TERM 1334 2871129 - 2871167 + T 100 -25.5 -4.11692 | gap 1, opp_overlap 2871129, overlap 2871132 CGCCTTTCGGAATGA TGC-GCACGCCTGCCGAC GGAC GTCGGCAGGCGTGCTGCA TTTTCGGGGTCGATG TERM 1335 2871167 - 2871129 - T 95 -25.5 -2.70932 | gap 1, opp_overlap 2871129 2871132 CGCCTTTCGGAATGA TGC-GCACGCCTGCCGAC GGAC GTCGGCAGGCGTGCTGCA TTTTCGGGGTCGATG TERM 1336 2871132 - 2871163 + T 95 -26 -2.75081 | opp_overlap 2871129, overlap 2871129 CTTTCGGAATGATGC GCACGCCTGCCGAC GGAC GTCGGCAGGCGTGC TGCATTTTCGGGGTC TERM 1337 2871342 - 2871318 - T 70 -12.8 -3.34398 | overlap 2871316 2871319 2871332 GGCCCTGTCGAAACA CCCCGCCGCA AGGAG CGCGGCGGGA CCGGAGCGCCGCTGA RSP_1113 2872712 - 2871399 - | hemolysin-type calcium-binding region; RTX toxin RSP_1114 2872932 - 2873774 + | hemolysin-type calcium-binding toxin TERM 1338 2874051 - 2874078 + F 72 -4 -4.56597 | overlap 2874031 2874029 GCGGCCCTGCCGCTC GAACGCGGCGGT CTGC GCCATCTCGTTC TTTTTACGCAGGACA RSP_1115 2874093 - 2875880 + | hypothetical protein RSP_1116 2875880 - 2877121 + | glycosyltransferase TERM 1339 2878671 - 2878723 + G 73 -11.3 -3.84406 | GCGGGCGGCGCAGGG GCTGGCC-GAGCGGCTGGATGAGGC CTTCC GCTTC-TACGGCCTCTCCGGCCGGC TTCTTCTGGTGCCCG RSP_1117 2877118 - 2879298 + | hypothetical protein RSP_1118 2879295 - 2880572 + | group 1 glycosyltransferase TERM 1340 2880828 - 2880861 + G 73 -14.6 -3.14344 | gap 1 CTTCGCGATCCTCGC GGCGCGGCTGGCCGG ACAGC TCGGCCAGCC-CGTC TTCGTGGCAGCCGTC TERM 1341 2881695 - 2881729 + G 76 -8.5 -4.25104 | gap 1, opp_overlap 2881679 2881682, overlap 2881693 2881686 GACGCTCGCGCGGCT GACGGTCGGTCTCTGG CCGC CCAGCG-CCGGCGGTC TTTTCCTCGACGGAC RSP_1119 2880565 - 2882286 + | ABC protein exporter, fused ATPase and inner membrane subunits RSP_1120 2882283 - 2883584 + | HlyD family protein secretion protein , membrane fusion protein TERM 1342 2883804 - 2883827 + G 85 -13.8 -4.10657 | GGCACGGTGGTCTCG GGCGCCGAAC TGCA GGTCGGCGCC TTTTGCAGCCTGTCG RSP_1121 2883654 - 2884460 + | acetyl transferase RSP_1122 2884464 - 2885051 + | hypothetical protein DnaE 2887885 - 2885063 - | DNA polymerase III, alpha subunit MltB 2889183 - 2887930 - | membrane bound lytic murein transglycosylase B TERM 1343 2889359 - 2889309 - R 81 -7.3 -4.58395 | overlap 2889311 2889358 CTCACTCTGGAAAAA TATCCTCGGGGGGCACGGGGGGC GGAAG GCCCCCCGCCCCGGCCATGAAGA CCGCCGTCAGCGGCG TERM 1344 2889357 - 2889311 - R 73 -9.9 -3.90762 | overlap 2889309 CACTCTGGAAAAATA TCCTCGGGGGGCACGGGGGGC GGAAG GCCCCCCGCCCCGGCCATGAA GACCGCCGTCAGCGG rnr 2891624 - 2889366 - | RNAse R ElaA 2892086 - 2891670 - | acetyltransferase dapE 2893225 - 2892083 - | succinyl-diaminopimelate desuccinylase TERM 1345 2892694 - 2892671 - G 77 -6.6 -4.56597 | gap 1, opp_overlap 2892647 2892646 2892644 GCGGGCGGTGAAAAA GGCCGTCATCG AAC CG-CGGCGGCC GATCTTCATCATCTC RSP_1129 2893562 - 2893278 - | hypothetical protein TERM 1346 2893328 - 2893350 + gr 74 -14.8 -3.04461 | CCGAGTTCTCGGCCA GCGCCCGCTG CAT CAGCGCGCGC TCTTCGGCGTCGATC TERM 1347 2893548 - 2893502 - GR 71 -15.7 -2.66316 | overlap 2893499 TTGCGTAGCACATCA GCGCCGCGCCGGTCGCGCCCT TGGGC AGCCCGTCACCGGCGCAGCGC CCGACCTCGATCACC RSP_1130 2894352 - 2893534 - | hypothetical protein TERM 1348 2894461 - 2894441 - R 74 -15.4 -3.01712 | GGTCCTGCCCGAAGA CGGCCGGG TGGGG CCCGGCCG GCGCGGCCCGCAGGG dapD 2895305 - 2894481 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase RSP_1132 2895372 - 2896196 + | hypothetical protein RSP_1133 2896541 - 2896200 - | hypothetical protein Dxs 2898734 - 2896821 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 2899613 - 2898744 - | farnesyl-diphosphate synthase xseB 2899849 - 2899610 - | exodeoxyribonuclease VII small subunit RSP_1137 2900769 - 2899846 - | histone deacetylase family protein RSP_1138 2901588 - 2900890 - | two component transcriptional regulator RSP_1139 2902094 - 2901585 - | MarR family transcriptional regulator ilvE 2902250 - 2903116 + | branched-chain amino acid aminotransferase TERM 1349 2903178 - 2903157 - T 82 -15.1 -3.50853 | CGCCCGCAATCAGAA GGGCGCGCC CGCA GGCACGCCC CCGACCCTCGTCTTC RSP_1141 2903373 - 2903203 - | hypothetical protein RSP_1142 2903849 - 2903442 - | hypothetical protein RSP_1143 2904924 - 2903878 - | 4Fe-4S ferredoxin, iron-sulfur cluster binding protein Gst 2905646 - 2904921 - | glutathione S-transferase TERM 1350 2905016 - 2904996 - G 95 -2.5 -5.72118 | overlap 2905005 AAAAAAGACAAAAAA CCACAAC AAGGCGG GCTGCGG GAAGCCCGGCACCTG RSP_1145 2906467 - 2905727 - | peptidoglycan transglycosylase TERM 1351 2906709 - 2906692 - R 90 -14.1 -4.04206 | opp_overlap 2906681 GCACGCGGATAGAAA GGGGGGC CGCA GCCCCCC TCTCCGTCGCTTCAC gltB 2911259 - 2906721 - | glutamate synthase (NADPH) large subunit RSP_1147 2911700 - 2911263 - | hypothetical protein RSP_1148 2912424 - 2911690 - | hypothetical protein TERM 1352 2912394 - 2912360 - G 72 -11.4 -3.59979 | overlap 2912315 CGCCCGGAGCCGAAA GCGGGGGCGGC-CGCG ATCAG CGCGAGCC-CTCCCGC CAGGATCTTCGTCAG gltD 2913941 - 2912514 - | putative oxidoreductase TERM 1353 2914023 - 2914009 - R 81 -10 -4.36914 | opp_overlap 2914009 2914008 2914006 CCGGCGGGCATAAAA GTCAGC AAG GCTGAC CTATTTGTCGATTTT uppP 2914912 - 2914106 - | undecaprenyl pyrophosphate phosphatase RSP_1151 2915931 - 2914945 - | NADH-ubiquinone oxidoreductase rnd 2916201 - 2916815 + | ribonuclease D GutQ 2916838 - 2917761 + | sugar phosphate isomerase RSP_1154 2917765 - 2918379 + | hypothetical protein RSP_1155 2918403 - 2918894 + | OstA-like protein RSP_1156 2918891 - 2919652 + | ABC transporter, ATPase subunit PSrp1 2919878 - 2920453 + | sigma 54 modulation protein / SSU ribosomal protein S30P TERM 1354 2920581 - 2920552 - g 79 -12.9 -3.75024 | gap 1, opp_overlap 2920576 GGTCACGAGCAAGAA GCG-CCTCTTCCAG GAA CTGGGAGAGGTCGC CGCGCAGGCCTATGC PtsN 2920487 - 2920951 + | PTS IIA-like nitrogen-regulatory protein PtsN TERM 1355 2920960 - 2920980 + T 71 -9.6 -3.7282 | overlap 2920961 CGCCTGAACGGTCCC GGGGCGGC CCCGT GCCGCCCG TTCTTCATCACATCC TERM 1356 2921348 - 2921305 - T 100 -23.2 -4.55128 | gap 1 ATCCGGAAATGAAAA CGGCCCCCGGG-CCGGCGC GTCAGGA ACGCCGAACCCGGGGGCCG AACTGCATGTCGGGC galU 2922259 - 2921366 - | UDP-glucose pyrophosphorylase kdsB 2923457 - 2922660 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1357 2923015 - 2922962 - G 73 -13.8 -3.3353 | overlap 2922960 CCTTCGAGAAATAGA GCGCGTGGCGCGT-GGCGCCGAAGAC GGCG GTCGT-GCCGCCGACGCGGCCCGCGC GACGGTCGGTCAGAA RSP_1161 2924287 - 2923493 - | 3'-phosphadenosine 5'-phosphosulfate 3'-phosphatase TERM 1358 2924514 - 2924529 + H 100 -11.8 -5.46698 | CACCGATGATCGCAA CGGGCC GCTC GGCCCG TTTTTTCGTTTTGGG RSP_1162 2924552 - 2925166 + | hypothetical protein nusA 2925203 - 2926810 + | transcription elongation factor NusA RSP_1164 2926825 - 2927457 + | hypothetical protein infB 2927454 - 2929964 + | translation initiation factor IF-2 TERM 1359 2930018 - 2930043 + T 100 -21.9 -4.45544 | opp_overlap 2930018 TCCCGAGATTAGAAA GGCCGGGCAGC TGAC GCTGCCCGGCC TTTTCGTTCGTCACG TERM 1360 2930043 - 2930018 - T 100 -21.9 -4.0162 | opp_overlap 2930018 TCCCGAGATTAGAAA GGCCGGGCAGC TGAC GCTGCCCGGCC TTTTCGTTCGTCACG mutT 2930751 - 2930353 - | NTP pyrophosphohydrolase argJ 2932085 - 2930748 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein surA 2932968 - 2932108 - | PpiC-type peptidyl-prolyl cis-trans isomerase secA 2933162 - 2935888 + | preprotein translocase subunit SecA RSP_1170 2936003 - 2937541 + | OmpA family protein radC 2938283 - 2937519 - | DNA repair protein RadC TERM 1361 2938521 - 2938499 - R 100 -17.7 -4.33767 | AGAAACGGACGAAAA GCCGCGCCC GTTAG GGGCGCGGC GCTCGGGTCAGCCGG dnaJ 2939677 - 2938529 - | chaperone, DnaJ TERM 1362 2939456 - 2939492 + g 70 -12.4 -3.31144 | gap 2, overlap 2939459 GCCCATGCCGCCCTC GAAGGCCG-C-ATGGCCG TAG CGGTCGTAGGCGGCCTTC TTGTCGGCGTCGCGA dnaK 2941660 - 2939750 - | heat shock protein (Hsp70, DnaK TERM 1363 2941266 - 2941287 + g 73 -9.4 -4.01071 | overlap 2941267 GCCTGCGTCACCGAC TCGCCGAG ATAGGC CTCGGCGG TTTCCTTCATCTTCT TERM 1364 2941851 - 2941834 - R 74 -12.7 -3.66424 | GAAAATCATGTCAAA GACCGCG GGTC CGCGGTC CCTCCGCAGGCTGCG pip 2942838 - 2941873 - | prolyl aminopeptidase ubiG 2942900 - 2943643 + | 3-demethylubiquinone-9 3-methyltransferase TERM 1365 2943670 - 2943652 - T 100 -17.4 -4.35116 | opp_overlap 2943652 2943656 2943659 CAGCTGACAGGAAAA GGCCGCCC CGG GGGCGGCC TTCGCTTCCGGTCCT TERM 1366 2943652 - 2943670 + T 85 -17.4 -3.18452 | opp_overlap 2943652, overlap 2943656 2943659 CAGCTGACAGGAAAA GGCCGCCC CGG GGGCGGCC TTCGCTTCCGGTCCT xylA 2944990 - 2943689 - | xylose isomerase xylB 2946423 - 2944987 - | xylulose kinase RSP_1178 2947205 - 2946423 - | ABC sugar (xylose) transporter, ATPase subunit xylH 2948500 - 2947202 - | ABC sugar (xylose) transporter, inner membrane subunit TERM 1367 2948321 - 2948285 - G 70 -13.7 -3.23216 | CGTGACGATCACGAA GACCATCCCCGTCGCCA TGA TCGCGACCGAGACGGTC TGGATCGCGAGGGTG xylF 2949613 - 2948588 - | ABC sugar (xylose) transporter, periplasmic binding protein TERM 1368 2949595 - 2949572 - G 95 -14.6 -4.34402 | gap 1, opp_overlap 2949593 CGCGGCAGAGGAAAA GCCGGCCGTGG CGA CCACGGC-GGC CAAAAGGGCCTTATG xylR 2949805 - 2951082 + | xylose operon repressor RSP_1182 2951271 - 2953094 + | putative outer membrane protein TERM 1369 2955286 - 2955314 + G 86 -18.1 -3.28712 | opp_overlap 2955251 2955250 2955283 GCGGGCGACGAACCT GCGCGTCGGCCAG TCT CAGGCCGATGCGC TTCTGCGCGGCGAGA TERM 1370 2955377 - 2955361 - g 74 -9.3 -4.07568 | GGTTCGTCTCGAAAA CGGCGCG ATC CGCGTCG ACCGGGCGGCCCTGC RSP_1183 2953094 - 2956924 + | hypothetical protein RSP_1184 2957961 - 2957125 - | ribonuclease BN TERM 1371 2957984 - 2958010 + r 77 -15.1 -3.13343 | opp_overlap 2957984 2957987, overlap 2957987 CCGTTCCGGAATGAA GAAGGCCCGCG GCTTG CGCGGGCCTCC TTAGGTCGTTCGCAT TERM 1372 2958010 - 2957984 - R 87 -17.3 -3.33696 | opp_overlap 2957984 2957987, overlap 2957987 CCGTTCCGGAATGAA GAAGGCCCGCG GCTTG CGCGGGCCTCC TTAGGTCGTTCGCAT TERM 1373 2957987 - 2958007 + r 70 -15.4 -2.77235 | opp_overlap 2957987 2957984, overlap 2957984 TTCCGGAATGAAGAA GGCCCGCG GCTTG CGCGGGCC TCCTTAGGTCGTTCG TERM 1374 2958007 - 2957987 - R 88 -15.4 -3.81146 | opp_overlap 2957984 2957987, overlap 2957984 TTCCGGAATGAAGAA GGCCCGCG GCTTG CGCGGGCC TCCTTAGGTCGTTCG RSP_1185 2958266 - 2958036 - | hypothetical protein RSP_1186 2959017 - 2958355 - | hypothetical protein TERM 1375 2958863 - 2958883 + g 72 -5.3 -4.4078 | overlap 2958864 2958865 TTGGCCCGTGTCAGG TTCTGCGGC CCG GTCGCAGGC TTTTCCTTGCCCCCC RSP_1187 2961185 - 2959017 - | hypothetical protein wcaG 2963147 - 2961261 - | nucleotide sugar epimerase/dehydratase wcaJ 2963939 - 2963295 - | sugar transferase RSP_1190 2964769 - 2963936 - | hypothetical protein RSP_1191 2965212 - 2964769 - | MarR family transcriptional regulator grxC 2966304 - 2966047 - | glutaredoxin comF 2967062 - 2966340 - | competence protein F TERM 1376 2967846 - 2967826 - g 72 -12.5 -3.43492 | CGAGAGCCAGCAGAA GCCGCTCCG GCC CGGATCGGC GGCCCGGAGCCTGGC RSP_1196 2967095 - 2967907 + | SAM-dependent methyltransferase TERM 1377 2968555 - 2968544 - g 70 -2.2 -4.46615 | gap 1, overlap 2968545 CATGATGAAGGAAAA GC-GG CAG CCTGC GGTGCGGACCGTGCC hemH 2967945 - 2969078 + | ferrochelatase TERM 1378 2969223 - 2969197 - f 85 -15.9 -3.56704 | gap 1, overlap 2969193 2969199 GCCCCATCAAATGAA GAGGGCGGCAGG TTTC CCTGCCGCCC-C AAGTCGGGATGTCGT TERM 1379 2969222 - 2969199 - f 91 -19.6 -3.35849 | overlap 2969197 2969193 CCCATCAAATGAAGA GGGCGGCAGG TTTC CCTGCCGCCC CAAGTCGGGATGTCG RSP_1198 2969232 - 2969576 + | hypothetical protein RSP_1199 2970171 - 2969569 - | hypothetical protein RSP_1200 2970334 - 2970888 + | hypothetical protein RSP_1201 2971438 - 2970938 - | hypothetical protein TERM 1380 2971033 - 2971049 + g 70 -9.3 -3.81488 | AGCCGGCCGTCCAGT CGCGCCG GTT CGGCCCG TTATATTTGCCGCGA TrmA 2972750 - 2971536 - | 23S rRNA (uracil-5-)-methyltransferase RumA RSP_1203 2974591 - 2972747 - | ABC multidrug efflux pump, fused ATPase and inner membrane subunits RSP_1204 2976432 - 2974588 - | ABC multidrug efflux pump, fused ATPase and inner membrane subunits RSP_1205 2977637 - 2976495 - | Poly A polymerase family protein RSP_1206 2978221 - 2977634 - | putative phosphohydrolase (mutT/nudix family protein) hslO 2979203 - 2978214 - | putative Hsp33 protein RSP_1208 2979276 - 2979713 + | NUDIX hydrolase RSP_1210 2980943 - 2979741 - | response regulator receiver protein RSP_6148 2981183 - 2981512 + | histidine phosphotransfer domain-containing protein argG 2982879 - 2984105 + | argininosuccinate synthase TERM 1381 2984110 - 2984139 + F 77 -10.8 -3.90744 | gap 2, overlap 2984110 TGAAGGGCTGAGGCT GG--AACCGGCGCC CTGC GGCGCCGGTTGACC TTCTTTCCCAAGGGA RSP_1213 2984211 - 2984846 + | hypothetical protein RSP_1214 2985558 - 2984836 - | putative branched-chain amino acid aminotransferase ilvE 2986454 - 2985555 - | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase rbsK 2987375 - 2986521 - | carbohydrate kinase ribokinase family protein RSP_1217 2989654 - 2987375 - | malic enzyme TERM 1382 2992041 - 2992029 - g 71 -9.1 -4.08692 | CAAGGGCGTGGAAAA CGCGA CCG TCGCG GTGAAGGAATGGGAA mutS 2989762 - 2992389 + | DNA mismatch repair protein grpE 2993071 - 2992502 - | putative chaperone protein GrpE (heat shock protein) hrcA 2994138 - 2993068 - | heat-inducible transcription repressor rph 2994260 - 2994985 + | RNAse PH ham1 2994982 - 2995593 + | putative deoxyribonucleotide triphosphate pyrophosphatase tdcF 2995590 - 2995964 + | YjgF family translation initiation inhibitor hemN 2995967 - 2997124 + | coproporphyrinogen III oxidase RSP_1226 2997126 - 2997479 + | hypothetical protein spo0J 2998359 - 2997454 - | chromosome segregation DNA-binding protein parA 2999180 - 2998356 - | chromosome segregation ATPase gidB 2999793 - 2999173 - | putative GidB, glucose inhibited division protein gidA 3001670 - 2999790 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 3002953 - 3001667 - | tRNA modification GTPase TrmE TERM 1383 3002104 - 3002068 - G 70 -2.8 -4.48987 | opp_overlap 3002078, overlap 3002070 CGTCCAGAAGGAAAA CACGCAG-GTCCGCGGCC TTG GCCCG-GGTCACGGCGCG TTCGATGCCAAGGCT rho 3004247 - 3002979 - | transcription termination factor Rho RSP_1232 3004886 - 3004389 - | putative integral membrane protein maf 3005269 - 3005862 + | putative Maf/YceF/YhdE family protein aroE 3005859 - 3006698 + | shikimate 5-dehydrogenase coaE 3006695 - 3007288 + | dephospho-CoA kinase dnaQ 3007281 - 3007970 + | putative DNA polymerase III, epsilon subunit and related 3'-5' exonuclease secB 3008501 - 3007974 - | preprotein translocase subunit SecB TERM 1384 3008205 - 3008244 + g 78 -11.4 -3.95324 | gap 1, opp_overlap 3008193 3008226 GAAGATCCCGCCGTA GTCGAGCTCGAGCAGAAAC AGC GTCTCGGC-CGAGCCCGAC TTGTTCTTCGAGGTC fxsA 3009011 - 3008535 - | putative FxsA cytoplasmic membrane protein RSP_1239 3009155 - 3009814 + | hypothetical protein TERM 1385 3009863 - 3009883 + G 73 -13.9 -3.36492 | overlap 3009843 CCGTGACGGCGGCCT CCGGCGCCG CGT CGGCGCAGG TTCTGGAGTTCGAGG RSP_1240 3009814 - 3010839 + | putative membrane-bound lytic murein transglycosylase A transmembrane protein RSP_1241 3010839 - 3011435 + | putative Smr protein/MutS2 RSP_1242 3011876 - 3011463 - | hypothetical protein RSP_1243 3012892 - 3011873 - | LacI family transcription regulator RSP_1244 3013043 - 3014101 + | putative IolE, sugar phosphate isomerase/epimerase TERM 1386 3015040 - 3015059 + G 73 -10.6 -3.73968 | overlap 3015051 3015052 CGGGTGAGCCGCACG CCCGCGGG CCAT CCCGAGGG TTTCCTCGAGGCTTT RSP_1245 3014098 - 3015243 + | Gfo/Idh/MocA family oxidoreductase RSP_1247 3015240 - 3016739 + | ABC sugar transporter, ATPase subunit RSP_6150 3016736 - 3017728 + | ABC sugar (ribose) transporter, inner membrane subunit RSP_1249 3017747 - 3018709 + | ABC ribose transporter, periplasmic solute-binding protein TERM 1387 3018721 - 3018748 + F 95 -24.2 -2.81464 | CTGAGCCGGGGCGAA GCGCGGCCCCTC CCCC GAGGGGCCGCGC TCTCCTCGATCCTGC TERM 1388 3019133 - 3019152 + F 75 -6.4 -4.41047 | GCAGTCGCAGCATTC TCCGCG CCAGCTCC CGCGGA TTTTCGTTGACGGGT RSP_6151 3019238 - 3019639 + | hypothetical protein TERM 1389 3019657 - 3019687 + T 90 -19.7 -3.12351 | opp_overlap 3019611 CGACCGTCGACCGCA GGGCCGGAAGCGG TGCGC CCGCCTCCGGCCC TTGCCTGTCAGGCGG TERM 1390 3020263 - 3020218 - T 79 -11.2 -4.07568 | gap 2, opp_overlap 3020219, overlap 3020200 3020219 GCCTCCCTCTGAAAA GCCTGTCAACGGCCGGGTGGAG AGGG CTCCGGCCGGCCATTGAC-G-C TGTCGCTTACAGCCA RSP_1252 3021211 - 3020270 - | 2-nitropropane dioxygenase-like protein RSP_1253 3021437 - 3021775 + | hypothetical protein RSP_1254 3023046 - 3021856 - | acetate kinase RSP_1255 3024464 - 3023043 - | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase RSP_1256 3025209 - 3024451 - | enoyl-(acyl carrier protein) reductase phbC 3026943 - 3025222 - | putative polyhydroxyalkanoic synthase, PHA synthase TERM 1391 3027007 - 3027019 + H 82 -3.3 -4.98531 | ATGAAATCGGTGTAA TGCAG CCG CAGCA TTTTTGATTTGAGCA RSP_1258 3027250 - 3028188 + | putative hydrolase RSP_1259 3028270 - 3028473 + | hypothetical protein RSP_1260 3028529 - 3028990 + | hypothetical protein blrB 3029459 - 3029037 - | BLUF blue-light receptor RSP_1262 3030118 - 3029531 - | response regulator receiver protein RSP_1263 3030877 - 3030317 - | hypothetical protein RSP_1264 3031106 - 3031192 + | hypothetical protein kdpA 3031200 - 3032855 + | potassium-transporting ATPase subunit A TERM 1392 3033946 - 3033979 + G 91 -18.9 -3.28712 | gap 1, overlap 3033947 GGCGCGCGCTCAGGG GGCCACGGCGGTGCCC GAG GGGCAG-GCCGTGGCC TTCTCGGCCCAGACG kdpB 3032864 - 3034891 + | potassium-transporting P-type ATPase, B chain, KdpB kdpC 3034904 - 3035461 + | potassium-transporting P-type ATPase C chain, kdpC kdpD 3035465 - 3038128 + | osmosensitive K+ channel signal transduction histidine kinase kdpE 3038125 - 3038811 + | two component transcriptional regulator TERM 1393 3038791 - 3038832 + T 73 -8 -4.13767 | opp_overlap 3038815, overlap 3038793 GAGCCCGGCATCGGC TACCGGTTC-CGCGGCCGCT AGAC AGCG-CCGCGCGAGCAGGTC TTTTGACATGAAAAA TERM 1394 3038865 - 3038848 - T 100 -14.1 -4.8048 | opp_overlap 3038847, overlap 3038815 TTTTGACATGAAAAA GGCCCGC CGAA GCGGGCC CTGTCGTGCGTCTCA RSP_1270 3039112 - 3038888 - | hypothetical protein RSP_1271 3040972 - 3039191 - | periplasmic sensor signal transduction histidine kinase TERM 1395 3041002 - 3040967 - G 74 -4.6 -4.57073 | CAGCCCGGGGAAAAA GGTCATGCAGCCGTCA TCCC CGACCGGGACATGACC GCGAGCGTCTGTCCG RSP_1272 3041553 - 3040969 - | RNA polymerase sigma factor RSP_1273 3041756 - 3041550 - | hypothetical protein TERM 1396 3041833 - 3041792 - H 82 -16.7 -3.27721 | gap 1, opp_overlap 3041791 3041806, overlap 3041790 CAAAAGTTGATAAGA TCCCCGGAACCGAACG-CGG GCA CCGGCGTTCGGTTCCCAAGA ATGTTGCAGCCAGGG RSP_1274 3041859 - 3042668 + | two-component response regulator RSP_6152 3043041 - 3042682 - | hypothetical protein RSP_1275 3043116 - 3043865 + | Crp/Fnr family transcriptional regulator RSP_1276 3044005 - 3044457 + | hypothetical protein TERM 1397 3044501 - 3044531 + T 100 -12.4 -4.77036 | overlap 3044505 3044506 GCGGGTCACGCACGA CCCAGGGCGGCGCC TCC GGCGCCGCCGTTCG TTTTTGATGGTGGGC TERM 1398 3044505 - 3044527 + T 93 -16.2 -3.85504 | overlap 3044501 3044506 GTCACGCACGACCCA GGGCGGCGCC TCC GGCGCCGCCG TTCGTTTTTGATGGT TERM 1399 3044506 - 3044526 + T 84 -19.7 -2.90218 | overlap 3044505 3044501 TCACGCACGACCCAG GGCGGCGCC TCC GGCGCCGCC GTTCGTTTTTGATGG TERM 1400 3044648 - 3044605 - T 75 -16.1 -2.90496 | gap 1, overlap 3044602 3044607 CTGGTTCGGAAACGA GACGCGCCGCCAGCAGGG GAGGGAAAA CCCTGGTGGCGGCGC-TC GGCCCGCGGCAGTTC TERM 1401 3044647 - 3044607 - T 74 -15.4 -3.00525 | overlap 3044605 3044602 GGTTCGGAAACGAGA CGCGCCGCCAGCAGGG GAGGGAAAA CCCTGGTGGCGGCGCT CGGCCCGCGGCAGTT RSP_1277 3046066 - 3044759 - | hypothetical protein cbbZ 3046719 - 3046063 - | phosphoglycolate phosphatase cbbY 3047411 - 3046719 - | CbbY family protein cbbX 3048433 - 3047408 - | CbbX protein cbbS 3048897 - 3048508 - | ribulose 1,5-bisphosphate carboxylase small subunit rbcL 3050369 - 3048909 - | ribulose bisophosphate carboxylase cfxA 3051463 - 3050384 - | fructose-1,6-bisphosphate aldolase prkA 3052459 - 3051587 - | phosphoribulokinase cbbF1 3053467 - 3052466 - | D-fructose 1,6-bisphosphatase cbbR 3053558 - 3054490 + | RuBisCO operon transcriptional regulator, CbbR RSP_1287 3055190 - 3054495 - | branched chain amino acid ABC transporter ATPase RSP_1288 3055893 - 3055192 - | branched chain amino acid ABC transporter ATPase RSP_1289 3056822 - 3055890 - | branched chain amino acid ABC transporter inner membrane protein RSP_1290 3057697 - 3056819 - | branched chain amino acid ABC transporter inner membrane protein RSP_1291 3058980 - 3057700 - | branched chain amino acid ABC transporter periplasmic substrate-binding protein RSP_6153 3059227 - 3059751 + | hypothetical protein RSP_1292 3061219 - 3059735 - | putative aldehyde dehydrogenase RSP_1293 3062250 - 3061216 - | putative acyl-carrier protein RSP_1294 3064430 - 3062247 - | branched-chain alpha-keto acid dehydrogenase E1 component TERM 1402 3062493 - 3062535 + g 77 -10.5 -4.07885 | gap 2, overlap 3062494 3062531 CGCCTCGAGCGGCAG GGGCGCGAGCCAGCGCAGATC GAG GATCCGCGC-GGC-CACGCCA TTTTCACGAAGCGTG RSP_1295 3065717 - 3064506 - | putative acyl-CoA dehydrogenase RSP_1297 3065797 - 3066711 + | LysR family transcriptional regulator nagA 3067816 - 3066683 - | N-acetylglucosamine 6-phosphate deacetylase RSP_1299 3067938 - 3069872 + | hypothetical protein TERM 1403 3070187 - 3070142 - g 76 -8.3 -4.17009 | overlap 3070139 AAACAAGAACAAGAA CAAGGTGG-CAGGTGCCGGCG GCGGCG CGGCGGC-CCTGTCCAGCCTG ATGCCGGCGCTGGAG RSP_1300 3069900 - 3070838 + | hypothetical protein RSP_1301 3070840 - 3072510 + | putative peptidase RSP_6154 3072641 - 3073534 + | hypothetical protein motB 3073609 - 3074445 + | putative chemotaxis MotB protein flgE 3074540 - 3075937 + | putative flagellar hook protein flgK 3075950 - 3077395 + | flagellar hook-associated protein FlgK RSP_1305 3077396 - 3078397 + | putative flagellar hook-associated protein TERM 1404 3078672 - 3078645 - g 74 -4.8 -4.57569 | opp_overlap 3078648, overlap 3078646 GTATCGGCCGAAAAA CGTGGCGGCA GTGTTCGT TACGGCCACG CTGCCCCCCTTTGCC flgI 3078397 - 3079488 + | flagellar basal body P-ring protein RSP_1306 3082313 - 3079464 - | PAS sensor Signal tranduction histidine kinase RSP_1308 3082377 - 3083459 + | hypothetical protein fliP 3084169 - 3083450 - | flagellar biosynthesis protein FliP RSP_1310 3084432 - 3084166 - | hypothetical protein fliH 3085015 - 3084425 - | putative flagellar biosynthesis/type III secretory pathway protein fliF 3086601 - 3085015 - | flagellar MS-ring protein RSP_1313 3086713 - 3087201 + | flagellar synthesis protein RSP_1314 3087235 - 3087597 + | hypothetical protein RSP_1315 3087594 - 3088151 + | hypothetical protein motA 3088208 - 3089077 + | flagellar motor protein MotA RSP_1318 3089074 - 3091032 + | hypothetical protein RSP_1319 3091328 - 3092008 + | invasion protein flhA 3092012 - 3094078 + | flagellar biosynthesis protein FlhA TERM 1405 3094390 - 3094417 + G 77 -10.4 -4.14243 | ACAGCGGGAACCATT GCAGCGCAGGCG ACGT CGCTGGCGCAGC TTTTCGGATCGACTG fliR 3094075 - 3094857 + | flagellar biosynthesis pathway, component FliR flhB 3094854 - 3095933 + | flagellar biosynthesis protein FlhB RSP_6155 3095930 - 3096259 + | hypothetical protein RSP_1323 3096578 - 3096291 - | hypothetical protein flgH 3097528 - 3096809 - | flagellar basal body L-ring protein flgA 3097958 - 3097539 - | flagellar basal body P-ring biosynthesis protein FlgA flgG 3098743 - 3097958 - | flagellar basal body rod protein FlgG flgF 3099459 - 3098740 - | flagellar basal body rod protein FlgF RSP_1328 3099727 - 3099461 - | flagellar biosynthetic protein FliQ fliE 3100017 - 3099727 - | flagellar hook-basal body protein FliE flgC 3100417 - 3100031 - | flagellar basal body rod protein FlgC flgB 3100797 - 3100414 - | flagellar basal body rod protein FlgB RSP_1332 3100881 - 3102191 + | H+-transporting two-sector ATPase, alpha/beta subunit RSP_1333 3102518 - 3102195 - | hypothetical protein RSP_1334 3102786 - 3102508 - | chemotactic signal-response protein CheL RSP_1335 3102890 - 3105109 + | hypothetical protein flgD 3105119 - 3105787 + | flagellar basal body rod modification protein aarF 3107263 - 3105782 - | 2-octaprenylphenol hydroxylase ubiE 3108065 - 3107313 - | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase RSP_1339 3108159 - 3109010 + | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase RSP_1340 3109071 - 3109847 + | short chain enoyl-CoA hydratase rpsT 3109958 - 3110236 + | 30S ribosomal protein S20 TERM 1406 3110264 - 3110281 + F 100 -14.1 -5.0925 | opp_overlap 3110264, overlap 3110265 GTCAGCAGGTTGAAA CGCGCCC CTCG GGGCGCG TTTTTCATTTTCCGC TERM 1407 3110281 - 3110264 - f 78 -14.1 -3.58343 | opp_overlap 3110264 3110265 GTCAGCAGGTTGAAA CGCGCCC CTCG GGGCGCG TTTTTCATTTTCCGC TERM 1408 3110721 - 3110709 - f 70 -3.3 -4.48987 | overlap 3110712 TTCGCAGAACCAAAA CAAGG CAT CCCCG CGCATTCGGCGCGGG TERM 1409 3110743 - 3110712 - f 78 -9.3 -4.35682 | gap 1, overlap 3110709 GCAGAACCAAAACAA GGCATC-CCCGCGC ATTCG GCGCGGGCGGGGCC GCAGGCGATGAACGG dnaA 3110775 - 3112142 + | chromosomal replication initiation protein TERM 1410 3112462 - 3112416 - g 71 -15.3 -3.12668 | gap 2 GACCTCGACATCGAA GTGGTGG-A-CCGCACGCCCG CGGTGGT CGAGCGTGCGGGCGCCACCAC CGTCTCGGCGGTCAT RSP_1343 3112260 - 3113378 + | DNA polymerase III subunit beta TERM 1411 3113413 - 3113383 - f 93 -21.8 -3.14132 | opp_overlap 3113376 3113387 3113388 TGCGCGTGTGACGAA GGGCGCGCGGGGGC GCT GCCCCCGCACCCCC GGGATATTTTCCCCA TERM 1412 3114402 - 3114426 + G 70 -13.5 -3.14132 | opp_overlap 3114404 GGCGCTTTTCGACGA GATCTGCGCGC TCG GCGCGCAGGCC TTCATGACCGGCACG recF 3113431 - 3114537 + | recombination protein F RSP_1345 3114534 - 3114956 + | hypothetical protein gyrB 3115048 - 3117483 + | DNA gyrase subunit B RSP_1348 3118729 - 3117440 - | hypothetical protein TERM 1413 3118483 - 3118447 - G 75 -14.9 -3.28712 | GGTCCTCGGTCAGAA GCGGTCGCGCCCGCGGC GTG GCCGCGCCCGCCGCCGC CTGAAGCGACGAGGC RSP_1349 3118819 - 3119895 + | hypothetical protein serB 3120978 - 3120103 - | phosphoserine phosphatase serC 3121118 - 3122275 + | phosphoserine aminotransferase TERM 1414 3122491 - 3122469 - g 81 -9.1 -4.52781 | overlap 3122449 3122470 CAAGGACAAGGAAAA GCTGGCCGA GATCA TCGGCCAGT ACGACGGCCTCGCGA TERM 1415 3122490 - 3122470 - g 70 -12.6 -3.30584 | overlap 3122449 3122469 AAGGACAAGGAAAAG CTGGCCGA GATCA TCGGCCAG TACGACGGCCTCGCG RSP_1352 3122347 - 3123951 + | D-3-phosphoglycerate dehydrogenase TERM 1416 3123995 - 3124031 + F 79 -10.7 -4.07568 | opp_overlap 3123996, overlap 3124001 CGGCCGGGGCGCATA AGGTGCGGAGGTCCGGC GCG GCCGGGCCTCCTTGTCA TTTTCCGGAAGGACC TERM 1417 3124001 - 3124025 + F 95 -19.3 -3.68359 | opp_overlap 3123996, overlap 3123995 GGGCGCATAAGGTGC GGAGGTCCGGC GCG GCCGGGCCTCC TTGTCATTTTCCGGA RSP_1353 3124050 - 3124781 + | hypothetical protein RSP_1354 3124864 - 3126033 + | beta-ketothiolase RSP_1355 3128067 - 3126043 - | glycosyl transferase family protein RSP_1356 3133490 - 3128064 - | hypothetical protein TERM 1418 3129666 - 3129698 + g 73 -10.3 -3.86015 | CAGGCCCGTCCGGCC GGCCGAGACCGGCAC CTC GATCCGGGCGCGGCC TTTCTCGGCCAGATC TERM 1419 3132847 - 3132800 - G 85 -17.6 -3.53012 | gap 1, opp_overlap 3132819 TCGTCTCGGCCGAAA GCGCGAGTTCGACCAGCGCCGTG TGG CGCAGCGCGGG-CGAGCCCGCGC GCAGATAGCCGTTGA TERM 1420 3134440 - 3134478 + G 71 -14.5 -3.06796 | gap 1, opp_overlap 3134396 TTCCCGGAAGCCGCG GGCCGCGAGGAGGAGTGG CTGG CCGA-CCGCCTCGCGGCC TTCCGTCACCTCGGC TERM 1421 3135242 - 3135194 - g 70 -14.6 -2.91274 | gap 2 GCGAGTTCAACCAGA TCGAGGCCGAGGCCACCCGCCGCT TCG AG-GGCAC-CGGCCTCGGCCTCGC CATCACCCGCCGCCT RSP_1357 3133645 - 3136194 + | cytoplasmic sensor hybrid histidine kinase RSP_1358 3137121 - 3136348 - | hypothetical protein recQ 3139166 - 3137121 - | DEAD/DEAH box helicase TERM 1422 3138068 - 3138030 - G 70 -12.5 -3.34398 | gap 2, overlap 3138028 GCTTTCGCCGAAATA GCCGA-G-CAGCACCTGCC GCC GGCAGGCGGTGGCCTCGGC CAGACCCAGCAGCGC RSP_1360 3139529 - 3139224 - | hypothetical protein RSP_1361 3139640 - 3140170 + | hypothetical protein RSP_1362 3140265 - 3141635 + | major facilitator transporter TERM 1423 3142453 - 3142429 - g 79 -13.5 -3.61398 | GTCGCCGCCGAAGAA GCCGTCGGGCC CGC GGCCCAAGGGC GCGCGCGACTACACG mepA 3141632 - 3142516 + | penicillin-insensitive murein endopeptidase RSP_1364 3142528 - 3143379 + | hypothetical protein RSP_1365 3143461 - 3144087 + | hypothetical protein TERM 1424 3144289 - 3144310 + F 79 -10.8 -3.96148 | opp_overlap 3144289 CTTGGATCTCGGAAA GGGTCGCC CCTCGT GGCGGCCC TTTCTCGTAGGGCGC RSP_1366 3144367 - 3144792 + | hypothetical protein RSP_1367 3146093 - 3144801 - | nicotinate phosphoribosyltransferase pncA 3146700 - 3146095 - | pyrazinamidase/nicotinamidase RSP_1369 3146893 - 3147675 + | Short-chain dehydrogenase/reductase SDR RSP_1371 3147672 - 3148595 + | 2-keto-3-deoxygalactonate kinase RSP_1370 3150163 - 3148553 - | alpha amylase domain-containing protein TERM 1425 3149211 - 3149198 - G 74 -9.5 -4.07687 | overlap 3149199 ATCGTGGTTGGAAAA GGCCC AGCA GGGCC AGCCCTGCGGTGCGG TERM 1426 3150215 - 3150268 + H 91 -14.6 -3.84825 | gap 3, opp_overlap 3150198, overlap 3150221 GACAGCCCGCGGCAG CGGTTCCCCTCCGACAGGCCTCC-GCA CCT TGCCGGCGGCCTGTCGG-GCGGT-CCG TTTCCTGTCCATCCA TERM 1427 3150221 - 3150264 + H 83 -19.6 -2.69601 | gap 1, opp_overlap 3150198, overlap 3150215 CCGCGGCAGCGGTTC CCCTCCGACAGGCCTCC-GCA CCT TGCCGGCGGCCTGTCGGGCGG TCCGTTTCCTGTCCA RSP_1372 3150624 - 3151862 + | major facilitator transporter RSP_1373 3151955 - 3153127 + | major facilitator transporter lpsB 3153176 - 3154210 + | putative lipopolysaccharide core biosynthesis mannosyltransferase protein RSP_1375 3154207 - 3154833 + | hypothetical protein asd 3154962 - 3155984 + | aspartate-semialdehyde dehydrogenase TERM 1428 3156034 - 3156061 + T 100 -24.2 -3.92324 | CTCCGAGACCGTGAA GCCCGCGGCAGG CGCA CCTGCCGCGGGC TTTCGTCTTCAGACC RSP_1377 3156738 - 3156070 - | carbonic anhydrase TERM 1429 3156334 - 3156316 - G 73 -14.6 -3.14564 | CCAGCGGCCGACGAA GCTCGAGG TTT CCTCGAGC TGCGGCGCCTTGCCC RSP_1378 3156854 - 3157237 + | hypothetical protein RSP_1379 3157254 - 3158693 + | cytosol aminopeptidase TERM 1430 3158814 - 3158865 + G 70 -9.3 -3.80573 | gap 1 TGCCGGTCGTGGATC TCCTCGCCCGTCCGGA-TGGCCCG CGGGA CCGGCAGCTCCTGCTGGGCGAGGA TTTCCTCGTGATCGA RSP_1380 3158690 - 3159505 + | hypothetical protein RSP_1381 3160832 - 3159612 - | hypothetical protein RSP_1382 3162025 - 3160847 - | radical SAM superfamily protein TERM 1431 3162125 - 3162105 - R 78 -13.9 -3.60151 | overlap 3162084 3162106 TCCCGCAAATGACAA GGCCCCGGC AGG GCCGGGGCA GGTCAGGGGCGGCGC TERM 1432 3162124 - 3162106 - R 78 -17.4 -2.75769 | overlap 3162084 3162105 CCCGCAAATGACAAG GCCCCGGC AGG GCCGGGGC AGGTCAGGGGCGGCG RSP_1383 3162694 - 3162164 - | hypothetical protein TERM 1433 3162735 - 3162752 + H 71 -2.5 -4.65895 | overlap 3162734 3162736 CCTCTGCCCGCCCCA CGCCGCC TTGT GGCGACC TTTTTGAGTAGCGCA RSP_1384 3162861 - 3163850 + | hypothetical protein RSP_1385 3164705 - 3163866 - | hypothetical protein RSP_1387 3164840 - 3166318 + | AMP nucleosidase RSP_1388 3166447 - 3166734 + | DNA-binding protein HU, form N TERM 1434 3166764 - 3166783 + F 100 -12.8 -4.72272 | ACGGCAGCCGTTCGA GGGTCGCC ATCC GGCGGCCC TTTTTCATGGGAGGG RSP_1390 3166804 - 3167685 + | DMT family permease aroC 3168782 - 3167682 - | chorismate synthase tbpA 3168984 - 3170012 + | thiamine transporter substrate binding subunit thiP 3169988 - 3171502 + | thiamine transporter membrane protein TERM 1435 3172116 - 3172137 + G 95 -12.9 -4.59773 | GACGGTCGGGCCGAG GCGCCGCAG CCGA CGGCGGCGC TTTTTGCCGATCCGC thiQ 3171489 - 3172184 + | ABC thiamine transporter, ATPase subunit TERM 1436 3172212 - 3172193 - T 100 -16.4 -4.27316 | opp_overlap 3172193 CCCCTGAACGGAAAA GGCCCCGC CGAA GCGGGGCC TGTCCTCATCGATCC TERM 1437 3172193 - 3172212 + T 75 -16.4 -2.83164 | opp_overlap 3172193 CCCCTGAACGGAAAA GGCCCCGC CGAA GCGGGGCC TGTCCTCATCGATCC fbcC 3173091 - 3172234 - | cytochrome c1 precursor fbcB 3174446 - 3173109 - | cytochrome b fbcF 3175020 - 3174457 - | ubiquinol-cytochrome C reductase, iron-sulfur protein TERM 1438 3175511 - 3175477 - R 90 -17.2 -3.53091 | opp_overlap 3175453, overlap 3175452 3175478 3175507 ACCCCCGCGGGGAAA CGGCCTGTCATTCGCG CTT CGTGAATGACAGGCCC CGGGACGGTGGCGGT TERM 1439 3175510 - 3175478 - R 83 -20.7 -2.71712 | opp_overlap 3175453, overlap 3175452 3175477 3175507 CCCCCGCGGGGAAAC GGCCTGTCATTCGCG CTT CGTGAATGACAGGCC CCGGGACGGTGGCGG RSP_1397 3176134 - 3175526 - | glutathione S-transferase RSP_6156 3176432 - 3176139 - | hypothetical protein TERM 1440 3176510 - 3176536 + r 100 -17.3 -4.0641 | gap 1, opp_overlap 3176510 CGCCTGACAGGAAAA GGCCGCCACGGG AGGT CCCG-GGCGGCC TTTCTGTCCCTCGAA TERM 1441 3176536 - 3176510 - R 100 -17.3 -4.34402 | gap 1, opp_overlap 3176510 CGCCTGACAGGAAAA GGCCGCCACGGG AGGT CCCG-GGCGGCC TTTCTGTCCCTCGAA rpmJ 3176688 - 3176563 - | 50S ribosomal protein L36P TERM 1442 3176754 - 3176730 - H 86 -6.9 -5.00616 | overlap 3176733 3176734 TGCGCCTTGAAAAAA CGATGCCCCCG AAC CGGGGGCGGTG AAATGGTGGGCGGTA RSP_1399 3176985 - 3177845 + | hypothetical protein RSP_1400 3179102 - 3177849 - | DNA polymerase IV RSP_1401 3179229 - 3180110 + | SPFH domain-containing protein/band 7 family protein RSP_6157 3180107 - 3180376 + | hypothetical protein RSP_1403 3180684 - 3181025 + | hypothetical protein RSP_1404 3181797 - 3181030 - | orotidine 5'-phosphate decarboxylase TERM 1443 3182548 - 3182567 + G 72 -12.8 -3.53012 | CATCGGCCCGTCGGT GGTCCCCG TGGG CGGGGGCC TTTCGAACGACGGCG RSP_1405 3181832 - 3182719 + | N-acetylglucosamine kinase RSP_1406 3182966 - 3182733 - | hypothetical protein TERM 1444 3183040 - 3183056 + H 75 -5 -4.59773 | opp_overlap 3183017, overlap 3183042 CCCCTTGCGGACCAT GACCGC ATGTC GCGGCC TTTTTCCGGGTCGGG clpB 3183269 - 3185881 + | chaperone ClpB TERM 1445 3185923 - 3185895 - T 100 -23.9 -4.1552 | GATGGCCTGAAGAAA CGGGCCCGCTCCA GAT CGGAGCGGGCCCG CGCTGCTGCGGCTGC RSP_1409 3186412 - 3185942 - | beta-Ig-H3/fasciclin RSP_1410 3186609 - 3187514 + | putative sulfite oxidase subunit YedY TERM 1446 3187750 - 3187772 + G 95 -5.4 -5.50499 | overlap 3187748 ATCTGATCCGTTTCC GGCGGGCGGT GGG GCTGCTGGCC TTTTTTTACGTCTGC RSP_1411 3187515 - 3188120 + | putative sulfite oxidase subunit YedZ SEQUENCE gi|77464988|ref|NC_007494.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence (length 943016) RSP_3806 6824 - 5736 - | hypothetical protein RSP_3807 7109 - 6828 - | hypothetical protein RSP_3808 8008 - 7172 - | hypothetical protein TERM 1 8321 - 8306 - R 89 -6 -5.16841 | opp_overlap 8306 8304 8320, overlap 8300 GCACATGAAGAAAAA GGCCGC GCGA GAGGCC TGTTTTCGGGTTTGC RSP_3809 8751 - 8443 - | hypothetical protein RSP_3810 9010 - 8756 - | hypothetical protein RSP_3811 9416 - 9093 - | hypothetical protein RSP_3812 9737 - 11308 + | recombinase parB 11308 - 12216 + | ParB-like nuclease RSP_3814 12213 - 13130 + | hypothetical protein TERM 2 13277 - 13299 + F 79 -18.4 -2.53015 | GAGATCTCGCCGGCC GCGCGGCCGC CTG GCGGCTGCGC TCCGTTCGGGCGTGT RSP_3816 13770 - 14000 + | hypothetical protein TERM 3 15167 - 15147 - f 72 -4.7 -4.4715 | gap 1, opp_overlap 15159, overlap 15148 15150 TTGCAAGGGACAAAA CGACGGCA GGATCA TGCCG-CG GCGCAGCAGGGCCTC RSP_6232 15252 - 16148 + | hypothetical protein rplU 16436 - 16831 + | 50S ribosomal protein L21P rpmA 16838 - 17107 + | 50S ribosomal protein L27 RSP_3821 17201 - 17809 + | putative acetyltransferase TERM 4 17835 - 17860 + F 100 -16.1 -4.17296 | opp_overlap 17832 17835 GCAGGCGCCAAACGA CGGGCGGAGGC TTGA GCCTCGGCCCG TTTCTCTCTATCGCC TERM 5 17860 - 17835 - f 75 -16.1 -2.91144 | opp_overlap 17835, overlap 17832 GCAGGCGCCAAACGA CGGGCGGAGGC TTGA GCCTCGGCCCG TTTCTCTCTATCGCC obgE 17904 - 18932 + | GTPase ObgE proB1 18932 - 20044 + | gamma-glutamyl kinase TERM 6 21012 - 21039 + G 73 -9.8 -3.88291 | gap 1, overlap 20975 20974 GCCGGGCACCGTGCC CGCGCAGCCCGAG GAT TTCGGGC-GCGAG TTTCTCGACATGATC proA 20095 - 21357 + | glutamate-5-semialdehyde dehydrogenase RSP_3825 21957 - 21361 - | hypothetical protein RSP_6239 21991 - 22170 + | hypothetical protein TERM 7 22589 - 22610 + G 70 -12.9 -3.40403 | GCTTCTGCCGGGCGA GCGCGCCGC GGGG GCGGGGCGC TTCTACTGCGACAGC RSP_3826 22338 - 23123 + | ornithine-acyl[acyl carrier protein] N-acyltransferase RSP_3827 23204 - 23944 + | lyso-ornithine lipid acyltransferase RSP_3828 24585 - 23965 - | putative thiamine-phosphate pyrophosphorylase RSP_3829 24699 - 25430 + | tRNA/rRNA methyltransferase (SpoU) RSP_3830 25513 - 25827 + | hypothetical protein cox15 25912 - 27087 + | putative cytochrome oxidase assembly factor cxp 27084 - 28565 + | carboxypeptidase TERM 8 29122 - 29149 + T 74 -14.8 -3.01712 | GCCGAATGATGCTGT CGGGCCGGGCGA GCGA TTGCCCGGCCGG TGTTGCCCCGGAGAA fadB 30222 - 29437 - | enoyl-CoA hydratase TERM 9 30015 - 29978 - G 75 -11.1 -3.87641 | overlap 29980 AACAGGTCCGAGAAA TAGGCGGCGCCCCGGTC GTCG GACTGGCGCGCGGCCTG CATCTCGCGCAGGTC TERM 10 30013 - 29980 - G 75 -13.7 -3.5241 | overlap 29978 CAGGTCCGAGAAATA GGCGGCGCCCCGGTC GTCG GACTGGCGCGCGGCC TGCATCTCGCGCAGG RSP_3834 30279 - 30704 + | hypothetical protein RSP_3835 31070 - 30711 - | hypothetical protein RSP_6211 31225 - 31521 + | hypothetical protein RSP_3836 31518 - 33170 + | putative metal-dependent hydrolase TERM 11 33244 - 33227 - T 83 -5.5 -4.8622 | opp_overlap 33235, overlap 33228 33235 CGCGGCAACGAAAAA CGCCAAG ATTT CTTGGCT GCGACATGAAATTGT RSP_3837 33596 - 33315 - | hypothetical protein TERM 12 35321 - 35335 + H 79 -11.4 -4.07568 | opp_overlap 35321 GCACATGCCTCAAAA CGGTCC ACT GGACCG TTTTGCCGCGCAGCG TERM 13 35335 - 35321 - H 82 -11.4 -4.10657 | opp_overlap 35321 GCACATGCCTCAAAA CGGTCC ACT GGACCG TTTTGCCGCGCAGCG TERM 14 35558 - 35616 + H 73 -8 -4.17023 | opp_overlap 35563, overlap 35559 TCCCGATAGGCTCCA CCAGATCCGGTTCGATCGCCAAGCCCAT GTG GTGGGTTTGGCCGTCCAACCGGACGAGA TTTTGACATCGTTCA TERM 15 35611 - 35563 - H 70 -14.6 -2.78935 | opp_overlap 35559 35558 ATAGGCTCCACCAGA TCCGGTTCGATCGCCAAGCCCA TGTGG TGGGTTTGGCCGTCCAACCGGA CGAGATTTTGACATC TERM 16 38954 - 38938 - H 81 -7.9 -4.6468 | overlap 38941 CCAAACGATACAAAA CACCCGG ACG CGGGGTG GAGCAGCCCGGTAGC TERM 17 39051 - 39069 + H 100 -17.4 -3.84451 | opp_overlap 39042 CATCAAGCGCTTGAG CGCCGCCC TCG GGGCGGCG TTTGCGTTTCCAACA TERM 18 39208 - 39246 + H 79 -8.1 -4.51363 | gap 1, opp_overlap 39209, overlap 39209 ACCGTTGATGTTCAA ACGACAGCGGACCTGGTC AACC GACCTG-TCCGATGTCGG TTTTAGTGTTTGGTG TERM 19 39245 - 39209 - H 71 -11.6 -3.57144 | gap 1, opp_overlap 39209 39208 CCGTTGATGTTCAAA CGACAGCGGACCTGGTC AACC GACCTG-TCCGATGTCG GTTTTAGTGTTTGGT TERM 20 39618 - 39600 - g 72 -5.9 -4.44974 | overlap 39591 CCAAACCCCAGAAAA GCAGGGC TCCTT GCCGTGC GGAAAAGTCCTCTTG RSP_3003 39397 - 39693 + | hypothetical protein RSP_3004 39958 - 40566 + | protein kinase RSP_3005 41167 - 40724 - | hypothetical protein TERM 21 41025 - 41006 - G 74 -7.2 -4.18094 | gap 1, opp_overlap 41006 41001 GAAATCACCGCAAAA GGGCA-ATC GCC GATATGCCC TGATTGTCTTCGCGT TERM 22 41253 - 41230 - H 71 -2.3 -4.66833 | overlap 41231 GGCCAATGTCAAAAA GCAGGCTAC GACGAA GAAGCCTGG AGCGAAGTGGGCGAT RSP_3006 41397 - 42065 + | hypothetical protein RSP_3007 42785 - 42204 - | hypothetical protein TERM 23 43244 - 43275 + r 75 -15.8 -2.90688 | gap 1 TTCGCTTGCACTCTC GCCGGCGG-CGCCGG CGT CCGGCGTCCGCTAGC TGTCTGAGCTCATTC TERM 24 44562 - 44549 - R 70 -3.7 -4.43307 | overlap 44558 GGGCCAACAAAACAA GGTCG GAAA CGGCC GCCTGAGTCGCCCAG RSP_3012 45330 - 44920 - | transposase RSP_3014 47048 - 46296 - | putative aldolase protein RSP_3015 47968 - 47048 - | 3-keto-5-aminohexanoate cleavage enzyme TERM 25 48021 - 47991 - R 70 -15.4 -2.71712 | opp_overlap 47991, overlap 47972 47990 CGGCCTTGTTGAAAG GGCCTGGCCCGG AGCAGTG CCGGGCCAGGCG TATGTCAGAACACCT TERM 26 47991 - 48021 + r 72 -15.4 -2.87211 | opp_overlap 47972 47991 47990 CGGCCTTGTTGAAAG GGCCTGGCCCGG AGCAGTG CCGGGCCAGGCG TATGTCAGAACACCT RSP_3016 48889 - 48026 - | phenol degradation enzyme RSP_3017 49444 - 48926 - | nitrilotriacetate monooxygenase RSP_3018 50690 - 49518 - | putative acyl-CoA dehydrogenase RSP_3019 51388 - 50714 - | putative hydrolase RSP_3020 51855 - 51385 - | hypothetical protein RSP_3021 52766 - 51852 - | putative catechol 2,3-dioxygenase TERM 27 53158 - 53114 - H 83 -14.9 -3.66178 | opp_overlap 53116, overlap 53115 GCGTGGAATTGGAAA CGTGGCGCGGTTGCGGTCTGG TTC CCGGATCGCAACCGCGGCATA TCTGGGGTGTCCCGC TERM 28 53157 - 53115 - H 74 -16.2 -2.79492 | opp_overlap 53116, overlap 53114 CGTGGAATTGGAAAC GTGGCGCGGTTGCGGTCTGG TTC CCGGATCGCAACCGCGGCAT ATCTGGGGTGTCCCG TERM 29 53116 - 53156 + H 100 -24.1 -2.90763 | opp_overlap 53115 53114 GTGGAATTGGAAACG TGGCGCGGTTGCGGTCTGG TTC CCGGATCGCAACCGCGGCA TATCTGGGGTGTCCC RSP_3022 53250 - 53951 + | TetR family transcriptional regulator RSP_3023 54858 - 53953 - | hypothetical protein RSP_3025 55010 - 55609 + | NAD(P)H oxidoreductase RSP_3024 56418 - 55582 - | DNA-binding transcriptional activator MhpR RSP_3026 58374 - 57004 - | GntR family transcriptional regulator rdxA 59911 - 58502 - | RdxA, iron-sulfur cluster-binding protein hemT 60315 - 61538 + | 5-aminolevulinate synthase RSP_3029 62611 - 61910 - | GntR family transcriptional regulator RSP_3030 62785 - 63729 + | ABC peptide/opine transporter, inner membrane subunit RSP_3031 63731 - 64624 + | ABC peptide/opine transporter, inner membrane subunit RSP_3032 64621 - 65592 + | ABC peptide/opine transporter, ATPase subunit RSP_3033 65589 - 66590 + | ABC peptide/opine transporter, ATPase subunit RSP_3034 66628 - 68187 + | ABC peptide/opine transporter, periplasmic substrate-binding protein RSP_3035 68309 - 69586 + | MFS family transporter RSP_3036 69625 - 71628 + | hypothetical protein TERM 30 71631 - 71666 + T 85 -17.6 -3.14211 | overlap 71634 GATCGATTATTGACC CGATGGCCGCCGCC GGAACAGG GGCGGCGGCCATGG TTCGTGCCCCGGGAT TERM 31 71634 - 71663 + T 78 -17.9 -2.77899 | overlap 71631 CGATTATTGACCCGA TGGCCGCCGCC GGAACAGG GGCGGCGGCCA TGGTTCGTGCCCCGG RSP_3037 72530 - 71772 - | putative short-chain dehydrogenase/reductase RSP_3038 73354 - 72551 - | ABC permidine/putrescine transporter, inner membrane subunit RSP_3039 74214 - 73363 - | ABC permidine/putrescine transporter, inner membrane subunit RSP_3040 75384 - 74227 - | ABC permidine/putrescine transporter, periplasmic substrate-binding protein RSP_3041 76541 - 75444 - | ABC permidine/putrescine transporter, ATPase subunit TERM 32 76587 - 76575 - H 83 -4.7 -4.89393 | opp_overlap 76575 TAAAGCGTAGAAAAA CGGCC AAA GGCTG TATATATCACAAAGG dorX 76617 - 77390 + | LuxR family transcriptional regulator dorY 77446 - 77592 + | DMSO reductase regulatory protein DorY RSP_3043 77673 - 78239 + | hypothetical protein dorS 78236 - 80677 + | DMSO/TMAO-sensor hybrid histidine kinase dorR 81393 - 80695 - | two component transcriptional regulator dorC 81663 - 82841 + | DMSO/TMAO pentaheme cytochrome c subunit dorB 82838 - 83518 + | DMSO-membrane protein dorA 83515 - 85983 + | DMSO/TMAO-reductase TERM 33 86024 - 86055 + F 70 -12.3 -3.32844 | gap 1, overlap 86025 CGCCGCCGCCTCACC TTCCCGGCCCG-CA CCCGC TGCCGGGCCGGGAC TTCTGACATCACCCG TERM 34 86025 - 86054 + F 73 -15.8 -2.59564 | gap 1, overlap 86024 GCCGCCGCCTCACCT TCCCGGCCCG-CA CCCGC TGCCGGGCCGGGA CTTCTGACATCACCC moeA 86114 - 87346 + | molybdenum cofactor biosynthesis protein TERM 35 87332 - 87368 + F 100 -16.6 -4.15044 | gap 1, overlap 87333 TGGTACCGGTTCGCC TGCGGGCGGGGCTGATC CCGT GATC-GCCCTGCCCGCC TTTCTTCCGCCCGCC TERM 36 87333 - 87367 + F 87 -20.1 -3.08812 | gap 1, overlap 87332 GGTACCGGTTCGCCT GCGGGCGGGGCTGATC CCGT GATC-GCCCTGCCCGC CTTTCTTCCGCCCGC moaA 87403 - 88419 + | molybdenum cofactor biosynthesis protein A TERM 37 88440 - 88458 + F 71 -11.6 -3.54935 | overlap 88436 88454 GAGGGGCGGCAGGCG GGGCGGAC CCG GCCCGCCC TTTACCGGCGCTTTC RSP_3051 88598 - 90577 + | putative phosphatase TERM 38 90607 - 90626 + T 78 -16.4 -3.05844 | opp_overlap 90603 90601 CTGACCAGAGACGGA GGCGGGCC CGAA GGCCCGCC TCTTCCGGTCCGGCA RSP_3052 91751 - 90873 - | LysR family transcriptional regulator RSP_3053 91912 - 92841 + | dioxygenase/glyoxalase family protein TERM 39 92913 - 92960 + F 72 -15.4 -2.89742 | gap 1, overlap 92916 GCCTTCGGAGGACTC GCCGCGGTCG-CGCGCGGGACTG CCG CAGCCTCGCGCGTCGCCCGCTGA TGTATCCCGCTTCGG TERM 40 92916 - 92957 + F 83 -20.1 -2.69647 | gap 1, overlap 92913 TTCGGAGGACTCGCC GCGGTCG-CGCGCGGGACTG CCG CAGCCTCGCGCGTCGCCCGC TGATGTATCCCGCTT RSP_3054 93178 - 93795 + | hypothetical protein TERM 41 93843 - 93796 - T 86 -18.5 -3.14132 | gap 3, opp_overlap 93833 CTTGCGGCGCACTAA CCGCCTCTCGC-G-CCGCGGCCCG CAC CGGGCCGCGGTCGGCAAG-GGCCG AAGCCTCCATGCCTC RSP_6161 94194 - 93910 - | hypothetical protein RSP_3055 94475 - 94945 + | MarR family transcriptional regulator RSP_3056 96898 - 94964 - | TonB dependent-iron siderophore receptor RSP_3057 98499 - 97408 - | ABC proline/glycine betaine transporter, ATPase subunit RSP_3058 99403 - 98492 - | ABC proline/glycine betaine transporter, inner membrane subunit TERM 42 99460 - 99432 - R 100 -24.7 -3.37612 | overlap 99436 GGTAAGGTCAATGAA CGAAGCCGGGCAG GGA CTGCCCGGCTTCG GGTCGGGCGGTCAGA TERM 43 99456 - 99436 - R 93 -18.3 -3.45634 | overlap 99432 AGGTCAATGAACGAA GCCGGGCAG GGA CTGCCCGGC TTCGGGTCGGGCGGT RSP_3059 100472 - 99471 - | ABC proline/glycine betaine transporter, periplasmic substrate-binding protein TERM 44 100196 - 100245 + g 73 -6.1 -4.45544 | CCGCCGCCTCGAGCG GGGTGCGCACGGCATTGACCCAG AGTT CGGGCGCCATGTCGGGCTCGCCC TTTTCGTTCATCGAG cysE 101473 - 102006 + | O-acetylserine synthase RSP_3061 102033 - 102344 + | hypothetical protein fabG 102341 - 103036 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 45 103891 - 103847 - g 72 -12.8 -3.5511 | overlap 103845 GCTGACCCAGAAATA CGGCACCTCCGAGCTCG-GCGC CCT GCGCTCGCGCTCCGAGG-GCGG GCGGTCGCTCTGGAT RSP_3063 103038 - 104378 + | AMP-dependent synthetase and ligase RSP_3064 104527 - 105309 + | DeoR family transcriptional regulator RSP_3065 105579 - 106712 + | MFS family transporter TERM 46 108078 - 108099 + G 73 -13.7 -3.29144 | gap 1 GTGGCCGAGCTGCGC GCCGCGCTGG CTG CC-GCGCGGC TTCTGCAGGAGGTCG RSP_3067 106851 - 108143 + | hypothetical protein RSP_3068 108140 - 108862 + | hypothetical protein RSP_3069 109618 - 109061 - | NADPH-dependent FMN reductase TERM 47 110921 - 110964 + G 81 -16 -3.48276 | overlap 110906 GGCGGGGATCGCGCG GCAGGTGGTGCTGCGCGA CCAGCCCT TCGCGCGGCCCTGCCTGC TTCTGTCGGGCGGCG RSP_3071 110019 - 111290 + | putative hydroxypyruvate reductase/glycerate kinase RSP_3070 112293 - 111259 - | hypothetical protein TERM 48 112225 - 112177 - G 70 -9.4 -3.86346 | gap 1 GCAGGGGCGGAGAAA GCAGACGACCTCATGGCCGC-GC GCGA GCAGCGCCCTCGCCGTCGCCTGC CCGATGGTGCCGGTG sndh 113821 - 112532 - | putative L-sorbosone dehydrogenase TERM 49 113986 - 114004 + H 71 -10.2 -3.68073 | overlap 113988 CCGGCAGGGGTTCGA CAGGCGCG CAT CGCGCCTA TTATTCAGTAAAATG TERM 50 113988 - 114002 + H 73 -12.8 -3.41988 | overlap 113986 GGCAGGGGTTCGACA GGCGCG CAT CGCGCC TATTATTCAGTAAAA RSP_3073 114199 - 114750 + | ErfK/YbiS/YcfS/YnhG family protein TERM 51 115070 - 115105 + T 77 -17 -2.63596 | gap 1 GGCGGGGGAGGTCGC CGGACGGCATCGCCAAC GAC GTTGGCGATG-CGTCCC TGCTCTCGGATCAGA ilvD 116987 - 115149 - | dihydroxy-acid dehydratase TERM 52 115628 - 115672 + g 71 -9.2 -4.11216 | opp_overlap 115646, overlap 115629 GGCTCTCGAACACCT TGGCGGGCCCGG-CGAAGACGA GGA TCGAC-TCGTCCACGCCCGCCG TTTTCACGATGCAGC TERM 53 116128 - 116101 - G 75 -14.1 -3.57144 | opp_overlap 116074 TCGTCCATGGTGAAA TCGACGCCGCC TTCCTG GGCGGCGGCGA GGATATGGAGCACCG TERM 54 117508 - 117526 + G 75 -17.4 -2.62184 | GCCGGCCCCCGCCAT GCCCGCGC CAA GCGCGGGC TCGTCTCGCGCCCCG RSP_3075 117226 - 118473 + | hypothetical protein RSP_3076 118473 - 119405 + | hypothetical protein RSP_3077 121063 - 119537 - | hypothetical protein RSP_3078 121454 - 121170 - | hypothetical protein RSP_3079 121538 - 122476 + | ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein TERM 55 122529 - 122496 - T 78 -15.9 -3.01712 | opp_overlap 122500, overlap 122499 CGGGCGCCCGGAAGA GCATCCGGCGCGCCC CTTA AGGCGCGCCGGTTTC TGTCAGCGCGGTTCG TERM 56 122526 - 122499 - T 74 -16.2 -2.73875 | opp_overlap 122500, overlap 122496 GCGCCCGGAAGAGCA TCCGGCGCGCCC CTTA AGGCGCGCCGGT TTCTGTCAGCGCGGT TERM 57 122500 - 122525 + T 100 -19 -4.03234 | opp_overlap 122499 122496 CGCCCGGAAGAGCAT CCGGCGCGCC CCTTAA GGCGCGCCGG TTTCTGTCAGCGCGG RSP_3080 124187 - 122532 - | BCCT family choline/carnitine/betaine transporter TERM 58 124414 - 124429 + r 72 -4.6 -4.40358 | overlap 124416 CCGGGGGGGAATGTC TACCGG CTGA CCGGAA TTTTCTGGCGTAGCT RSP_3081 126400 - 124697 - | ABC multidrug efflux transporter, fused ATPase and inner membrane subunits RSP_3082 126970 - 127317 + | hypothetical protein TERM 59 127312 - 127348 + T 93 -19.3 -3.53012 | opp_overlap 127310 127308 127313, overlap 127313 GCCTCCGAAAAGACG AGCTGAGCGCCCGGCCG CAC CGGCCGGGCGTGCGGCG TTTGCCCGGCCCGAA TERM 60 127347 - 127313 - T 82 -18.4 -2.93623 | opp_overlap 127312 127313, overlap 127310 127308 CCTCCGAAAAGACGA GCTGAGCGCCCGGCCG CAC CGGCCGGGCGTGCGGC GTTTGCCCGGCCCGA TERM 61 127313 - 127347 + T 87 -22.8 -2.71712 | opp_overlap 127313 127310 127308, overlap 127312 CCTCCGAAAAGACGA GCTGAGCGCCCGGCCG CAC CGGCCGGGCGTGCGGC GTTTGCCCGGCCCGA mcpH 129103 - 127418 - | methyl accepting chemotaxis protein RSP_3084 129803 - 129117 - | hypothetical protein RSP_3085 130099 - 131748 + | phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase TERM 62 131878 - 131935 + G 72 -12.6 -3.54741 | gap 2, opp_overlap 131868 GGAGACGGCCTTCCG GCACGAGCTGGCCGGCGGGGCAGCGGGG CTCG CGCTGCTGC-TTGCCGGTC-GCGCGAGC TTTCCCGAAATCCTC dgkA 131759 - 132139 + | diacylglycerol kinase RSP_3086 133437 - 132121 - | periplasmic sensor signal transduction histidine kinase RSP_3088 134093 - 133434 - | two component transcriptional regulator RSP_3089 134771 - 134379 - | hypothetical protein phnA 135194 - 135523 + | putative alkylphosphonate uptake protein, phnA RSP_3091 136183 - 135587 - | hypothetical protein TERM 63 136389 - 136364 - R 100 -19.7 -4.4078 | TGGCCCTAAGGAAAA GGCGCGACCGG AGAT CCGGCCGCGCC CCGAAGCCCCGCGAA RSP_3092 136992 - 136414 - | hypothetical protein RSP_3093 137730 - 137017 - | integral membrane protein RSP_3094 138525 - 137758 - | putative transmembrane anti-sigma factor RSP_3095 139048 - 138518 - | RNA polymerase sigma factor RSP_3096 139422 - 139114 - | hypothetical protein qoxA 141896 - 139419 - | QoxA, quinol oxidase subunit I qoxB 142678 - 141893 - | QoxB, quinol oxidase subunit II RSP_3100 143562 - 143050 - | hypothetical protein RSP_3101 146018 - 143700 - | periplasmic sensor diguanylate cyclase/phosphodiesterase TERM 64 146082 - 146106 + r 78 -13.6 -3.62864 | gap 1, opp_overlap 146078, overlap 146085 AGATGATGGAAGGTG GATCGGCCGGC GGGT GCCGGCCG-TC TTTCAGATCAGTTTC TERM 65 146085 - 146104 + r 82 -16.4 -3.3879 | opp_overlap 146078, overlap 146082 TGATGGAAGGTGGAT CGGCCGGC GGGT GCCGGCCG TCTTTCAGATCAGTT RSP_3102 146678 - 146487 - | Sec-independent protein translocase TatE RSP_3103 147245 - 147883 + | hypothetical protein fdh 147887 - 149071 + | putative glutathione-dependent formaldehyde dehydrogenase TERM 66 149099 - 149077 - T 78 -16.2 -3.05384 | opp_overlap 149078 CGGCGCCTGACGGAA GGCGGGCGGC GCA GCCGCCCGCT TCACTCCACCCGCAG TERM 67 149078 - 149098 + T 87 -19.7 -3.05384 | opp_overlap 149077 GGCGCCTGACGGAAG GCGGGCGGC GCA GCCGCCCGC TTCACTCCACCCGCA RSP_3105 151286 - 149100 - | PAS sensor protein RSP_3106 152263 - 151439 - | cation efflux transporter RSP_3107 152670 - 152398 - | hypothetical protein RSP_3108 154811 - 153123 - | putative methyl accepting chemotaxis protein TERM 68 153815 - 153853 + g 76 -12.3 -3.77087 | gap 1, overlap 153809 CGTTCACCGCCGACC CCGAGGCCTGAGCC-CGG TCCG CCGAGGTGCGGGCCACGG TTTCGGTATTGCCTG RSP_3109 155428 - 154964 - | MarR family transcriptional regulator TERM 69 155976 - 156015 + G 75 -14.2 -3.48924 | overlap 155969 CTGGGTCGTGGGCGA GAGCTTCAGCCTCGCCGA TTGT TCGGCGGCGCCGCAGCTC TTCTATGCCGACTGG RSP_3110 155515 - 156171 + | putative glutathione S-transferase RSP_3111 156203 - 156901 + | putative glutathione S-transferase RSP_3112 156912 - 157388 + | hypothetical protein TERM 70 157502 - 157447 - T 70 -12.6 -3.31144 | gap 3 GCCCGACCCGGAGAA GCGGGCGCGCGCTCCGA-AGCCCGGGC GTGAA GCCCGAGCCGTGGGAGGG-GC-CCCGC GCGCCCGTCCGCCTT dadA 158827 - 157517 - | D-amino acid dehydrogenase small subunit TERM 71 158359 - 158393 + g 73 -14.3 -3.28712 | CCCCGCCTGCGCGCA GCACCTCGATGTCGC GCGCG GCGGCGTCGAGCTGC TTCTGCGAACGGAAG TERM 72 158995 - 159005 + r 70 -8.2 -3.84719 | AAGGATCCACCATGG CGGC AGG GCCG TTTCGCTTTCGCCCT RSP_3114 160385 - 159306 - | hypothetical protein RSP_3115 160723 - 160469 - | hypothetical protein RSP_3116 161947 - 160781 - | membrane transporter RSP_3117 162726 - 163409 + | hypothetical protein RSP_3118 164891 - 163482 - | hypothetical protein RSP_3119 165494 - 164919 - | hypothetical protein RSP_3120 166410 - 165961 - | hypothetical protein RSP_6238 166798 - 166493 - | hypothetical protein RSP_3122 167891 - 166917 - | putative glutathione S-transferase TERM 73 167774 - 167723 - G 75 -15.6 -2.99471 | gap 1, overlap 167711 TCAGCGCGACATAGA GCCGGTAGCGCCCGGCCTCGGCCGC GAA GCCGCCGGTGCCGGTCGGC-CCGGC GCTGCCGTCGGGGGT RSP_3123 168723 - 167902 - | hypothetical protein RSP_3124 169000 - 169896 + | LysR family transcriptional regulator RSP_3125 169950 - 170282 + | ArsR family transcriptional regulator RSP_3126 170318 - 171370 + | ACR3 family arsenite efflux pump arsC 171367 - 171798 + | putative arsenate reductase RSP_3128 173009 - 172101 - | hypothetical protein RSP_3129 173637 - 174758 + | serine/threonine protein kinase TERM 74 174789 - 174815 + G 72 -15.8 -2.72144 | overlap 174788 CGCTTGTCGGATTGC TCTGGGCCGCGG CCG CCGCGGCACAGG ATTTCAGCGCCGTCG RSP_3130 174755 - 175969 + | putative serine protease RSP_3131 175966 - 176685 + | ABC transporter ATPase RSP_3132 176685 - 177875 + | hypothetical protein TERM 75 178187 - 178171 - g 73 -10.9 -3.75629 | GAGGCGGAAGCCAAA GCCATGT TTT ACATGGC GAAATACGAGATCGC RSP_3133 177868 - 179484 + | hypothetical protein RSP_6164 179503 - 179766 + | hypothetical protein TERM 76 180742 - 180767 + G 70 -12.5 -3.28924 | overlap 180764 CACGCCCCCGGGCAG CCGCGTGGTCA CCGA TGCCCGCGCGG TTGTGGCCGCCCATG RSP_3134 179774 - 181057 + | Serine/threonine protein kinase RSP_3135 181054 - 182949 + | ppkA-related protein RSP_3136 185744 - 183381 - | hypothetical protein RSP_3137 187974 - 186370 - | hypothetical protein TERM 77 187988 - 188041 + H 86 -22.5 -2.62263 | gap 1, opp_overlap 188005 188006, overlap 187990 ATGCGACTCCCCTGA GATTGGTGGTCGGAGAACCCGCCGCG CGG CGCGGCG-GTTCCCCGGCCGGCAGTC TCCTGTCCGCAGCCT TERM 78 187990 - 188039 + H 82 -19.3 -2.85351 | gap 1, opp_overlap 188005 188006, overlap 187988 GCGACTCCCCTGAGA TTGGTGGTCGGAGAACCCGCCGCG CGG CGCGGCG-GTTCCCCGGCCGGCAG TCTCCTGTCCGCAGC TERM 79 188025 - 188005 - H 74 -13.9 -3.28712 | opp_overlap 187990 187988, overlap 188006 TTGGTGGTCGGAGAA CCCGCCGCG CGG CGCGGCGGT TCCCCGGCCGGCAGT TERM 80 188024 - 188006 - H 77 -17.4 -2.57132 | opp_overlap 187990 187988, overlap 188005 TGGTGGTCGGAGAAC CCGCCGCG CGG CGCGGCGG TTCCCCGGCCGGCAG RSP_3138 188634 - 189473 + | gluconolactonase RSP_3139 190220 - 189816 - | hypothetical protein RSP_3140 190360 - 190941 + | hypothetical protein TERM 81 191514 - 191540 + F 71 -11.4 -3.57144 | opp_overlap 191503 GAGATCCCTGGGGAG CGTCCGGGCGGG ATC TCCGACCGGTCG TTTCCCGATGAGAAA RSP_3141 191591 - 191899 + | hypothetical protein TERM 82 192369 - 192396 + G 76 -9 -4.21194 | overlap 192357 GGTGCGCGTGTTCGC GGCTTCCTCGAC CCTC GTCGTGGTGGCC TTTTACCTCATCGCG actP 191896 - 193626 + | acetate permease TERM 83 193671 - 193640 - T 100 -15.8 -4.386 | opp_overlap 193643, overlap 193641 193643 GAAGCCTTCAGAAAA CGAGCCTGCCGCCC TTCG GGGCGGCAGGCTTT TTCGTGCCGGCGGGA TERM 84 193670 - 193641 - T 86 -19.3 -3.22678 | opp_overlap 193643, overlap 193640 193643 AAGCCTTCAGAAAAC GAGCCTGCCGCCC TTCG GGGCGGCAGGCTT TTTCGTGCCGGCGGG TERM 85 193668 - 193643 - T 93 -21.9 -3.1733 | opp_overlap 193643, overlap 193641 193640 GCCTTCAGAAAACGA GCCTGCCGCCC TTCG GGGCGGCAGGC TTTTTCGTGCCGGCG TERM 86 193643 - 193668 + T 100 -21.9 -4.72272 | opp_overlap 193643 193641 193640 GCCTTCAGAAAACGA GCCTGCCGCCC TTCG GGGCGGCAGGC TTTTTCGTGCCGGCG RSP_3143 194032 - 193691 - | hypothetical protein RSP_3144 195040 - 194042 - | hypothetical protein ttdB 195717 - 195037 - | putative tartrate dehydratase beta subunit ttdA 196643 - 195681 - | fumarase alpha subunit sdhA 198403 - 196640 - | putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit RSP_3148 198749 - 198405 - | putative succinate dehydrogenase cytochrome b-556 subunit RSP_3149 199081 - 198746 - | putative succinate dehydrogenase membrane anchor frdB 199813 - 199085 - | succinate dehydrogenase subunit B TERM 87 199966 - 199934 - R 100 -21.4 -3.53012 | gap 1 GGGGGTGCTTTGAAA CGCACATCGGCCCCC GAAC GGGGGCCGATG-GCG GATGAAGGTGCCCCG RSP_3151 201083 - 200091 - | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein RSP_3152 202090 - 201083 - | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein RSP_3153 203150 - 202239 - | nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein RSP_3154 203973 - 203143 - | nitrate/sulfonate/bicarbonate ABC transporter ATPase RSP_3155 205622 - 203970 - | thiamine pyrophosphate-requiring enzyme RSP_6165 205804 - 206700 + | LysR family transcriptional regulator RSP_6166 206713 - 207474 + | hypothetical protein RSP_3157 208721 - 207597 - | ABC transporter, inner membrane subunit RSP_3159 211428 - 208723 - | ABC transporter, 2 fused ATPase and 1 inner membrane subunits RSP_3160 212428 - 211433 - | HlyD family membrane fusion protein RSP_3161 215262 - 212647 - | hypothetical protein TERM 88 216380 - 216322 - R 78 -18 -2.75064 | gap 1, overlap 216319 GCTCGTATCCAAGGA GCATCGGCCGGGGCTGGTCGGCGCGGC CGCGCT GCCGC-CGGACCGACCCCGGCCGGCGG CGGTCACCGGGATCA RSP_3162 216980 - 216393 - | hypothetical protein RSP_3163 219123 - 216988 - | oxidoreductase RSP_3164 219585 - 219127 - | ferredoxin like protein RSP_3165 220411 - 219671 - | GntR family transcriptional regulator RSP_3166 221256 - 220411 - | ABC transporter, inner membrane subunit RSP_3167 222068 - 221253 - | ABC transporter, ATPase subunit RSP_3168 223099 - 222068 - | ABC transporter, periplasmic binding protein TERM 89 222916 - 222875 - G 75 -16.5 -3.03619 | opp_overlap 222884, overlap 222865 AAGCACGGCCGAAGA GCCGTCGATGGCCTCGAGC CGGG GCTCGAAGCCTTCTTCGGC GAAGTAGCCTTCGCC TERM 90 222884 - 222907 + g 75 -12.4 -3.61715 | opp_overlap 222875 CGAAGAGCCGTCGAT GGCCTCGAGC CGGG GCTCGAAGCC TTCTTCGGCGAAGTA TERM 91 223716 - 223690 - g 77 -6.6 -4.56597 | gap 1, overlap 223713 GGCGTGCTGGAAAAA GGCCTGCCGTG GGAGGT CACGA-AGGCC TTCGACCTCTCGGCC RSP_3169 223321 - 224019 + | FAA-hydrolase-family protein TERM 92 224343 - 224363 + G 82 -15.5 -3.66803 | GCGGTGCGGGACAGT GCCCAGATC GCG GATCTGGGC TTTCCGGTCTTCGCC RSP_3170 224025 - 224636 + | demethylmenaquinone methyltransferase RSP_3171 224637 - 225503 + | 3-hydroxyisobutyrate dehydrogenase RSP_3172 225503 - 226336 + | hypothetical protein RSP_3174 227858 - 226359 - | NCS1 nucleoside transporter TERM 93 227964 - 227913 - R 74 -13.4 -3.33696 | gap 1, opp_overlap 227934 CCTGTCGGGAAGGAA CCGGGCGCCGCCGCGCGGCTCTGCG CAT CGGGGTCCGGCGCG-CGGCCCCCGG CGCGCATGTCTCGCG TERM 94 227934 - 227970 + r 80 -17.2 -2.89564 | opp_overlap 227913 GCCGCCGCGCGGCTC TGCGCATCGGGGTCCG GCGCG CGGCCCCCGGCGCGCA TGTCTCGCGTCCGGC TERM 95 228087 - 228068 - R 73 -12.1 -3.53091 | AGCCTCTGCGCGAAA GCCGCCG GGCGTG CGGCGGC CCGTCAGCCGCTCGG RSP_3175 228516 - 228091 - | hypothetical protein fabI 229478 - 228690 - | enoyl-[acyl-carrier-protein] reductase [NADH] fabB 230718 - 229489 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 96 230733 - 230761 + r 70 -8.7 -3.889 | overlap 230734 TCGGTGTTCCTCCCC CTCGATCAGGCCG CAG CGGCCAGACCGAC TTTCATGTCCTTGAC fabA 231247 - 230738 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 97 231230 - 231246 + g 78 -2.1 -4.85599 | overlap 231231 CTCTTTGTCGAAGCT CGTCGGA TAG TCCGCCA TTTTTCTCCCGTCCG fur 231397 - 231837 + | ferric-uptake regulator RSP_3180 231968 - 232780 + | transglutaminase-like enzyme RSP_3181 233965 - 232784 - | fatty-acyl-CoA racemase RSP_3182 235095 - 233962 - | Acyl-CoA dehydrogenase RSP_3183 235853 - 235092 - | 3-hydroxyacyl-CoA dehydrogenase type II RSP_3184 237013 - 235853 - | putative thiolase cobB 238499 - 237174 - | cobyrinic acid a,c-diamide synthase RSP_3186 239405 - 238728 - | hypothetical protein TERM 98 239144 - 239117 - G 76 -17 -2.71483 | overlap 239103 239105 AGAGCCCCTGAACCA GCAGCCCGAGGG CGAG CCCTAGGGCTGC CGGCGCCGCTCCGAG RSP_6237 240018 - 240368 + | hypothetical protein TERM 99 240429 - 240408 - T 100 -17.3 -4.34402 | opp_overlap 240408 GCGCTGACAGCAAAA GGCCGGACC CTCG GGTCCGGCC TTTCCCTTGTGGCGC TERM 100 240408 - 240429 + T 95 -17.3 -3.80625 | opp_overlap 240408 GCGCTGACAGCAAAA GGCCGGACC CTCG GGTCCGGCC TTTCCCTTGTGGCGC mdoD 242051 - 240456 - | glucan biosynthesis protein D RSP_3188 243878 - 242304 - | ApbE family protein TERM 101 243208 - 243238 + g 78 -18.2 -2.52464 | GCGGCCTCAAGGCTC TGGCCCGCGCGGGC GAT GGCGGCGCGGGCCA TGCGTTCGGGCACGC RSP_3189 244080 - 243883 - | 4Fe-4S ferredoxin RSP_3190 244418 - 244131 - | 2Fe-2S ferredoxin fprA 245677 - 244448 - | flavodoxin rnfA 246232 - 246813 + | NADH-ubiquinone oxidoreductase; subunit RnfA rnfB 246833 - 247399 + | electron transport complex protein rnfB TERM 102 248076 - 248058 - g 72 -11.7 -3.65522 | CATCGAGTCGAACAA GGCCGAG GCGAT CTCGGCC ATGCAGCGCTTCGAC TERM 103 248803 - 248778 - g 70 -13.3 -3.39353 | gap 1, overlap 248770 ACAGGAAGAGACGAA GCGCCTCGCCGC CGC GCGG-AAGGCGC GCGAGGAGGCCGCGG rnfC 247396 - 248949 + | 4Fe-4S ferredoxin, RnfC rnfD 248946 - 250034 + | RnfD protein rnfG 250031 - 250690 + | electron transport complex, RnfABCDGE type, G subunit rnfE 250706 - 251440 + | SoxR-reducing system protein RsxE rnfH 251437 - 251694 + | rnfH protein RSP_3199 251744 - 252766 + | sulfide dehydrogenase (flavocytochrome), flavoprotein subunit TERM 104 253885 - 253845 - g 70 -13.4 -3.33261 | gap 2, opp_overlap 253845 GGCCAATGCCGACAA GCCCGGCGCCGCGATCCG CATGGGC CGGATCG-AGCGC-GGGC TCTATGCCGAGATCA RSP_3200 252907 - 254151 + | molecular chaperone, DnaK RSP_3201 255320 - 254301 - | putative oxidoreductase TERM 105 255302 - 255290 - G 87 -6.2 -4.96848 | overlap 255291 GCTCGGAGACAAAAA GGCC GCTCG GGCC GAGACGACGGTAACG RSP_3202 255489 - 256400 + | AraC family transcriptional regulator RSP_3203 256635 - 257666 + | transcriptional regulator RSP_3204 257830 - 258351 + | putative oxidoreductase RSP_3205 258348 - 259331 + | putative oxidoreductase subunit RSP_3206 259328 - 261547 + | xanthine dehydrogenase, molybdenum binding subunit apoprotein RSP_6168 261811 - 262581 + | ABC cobalt transporter periplasmic binding protein CbiN TERM 106 262691 - 262715 + G 76 -3.4 -4.63486 | GACGACCGGGGGATC CCGCGGGTGG CGCTC CTGTCGGCGG TTTTCTTCGCGGCCT RSP_3207 262583 - 263200 + | cobalt transport protein CbiM TERM 107 263302 - 263312 + G 74 -2.4 -4.72272 | overlap 263294 AGGGGCGCGAGGTCA GCGG CTA CGGC TTTTTCGTGGGCGGC RSP_3208 263202 - 263795 + | putative CbiL protein TERM 108 264420 - 264478 + G 84 -19.5 -2.72471 | gap 2, overlap 264421 264449 264473 TGCGGCCGGACCTGC CGCCGCCCGCGCTGCGCGACTGGCGGGGC GGG GCCCTGCTGCTCGCGCTG-G-GGGCGGGG CTTCTCTGGTGGGAC TERM 109 264421 - 264479 + G 81 -16.4 -3.54475 | overlap 264420 264449 264473 GCGGCCGGACCTGCC GCCGCCCGCGCTGCGCGACTGGCGGGGC GGG GCCCTGCTGCTCGCGCTGGGGGCGGGGC TTCTCTGGTGGGACC cbiQ 263792 - 264502 + | ABC cobalt transporter, inner membrane subunit, CbiQ cbiO 264499 - 265263 + | ABC cobalt transporter, ATPase subunit, CbiO qxtB 266264 - 265257 - | quinol oxidase subunit II QxtB qxtA 267663 - 266266 - | quinol oxidase subunit I QxtA RSP_3213 269157 - 268030 - | hypothetical protein TERM 110 269252 - 269232 - R 71 -11.1 -3.54129 | opp_overlap 269244 CAGATCCGGTGCAAA GACGGCGCA CCA TGAGCCGTC GCCACGAGTCCCGGT RSP_3215 272856 - 269476 - | hypothetical protein TERM 111 270729 - 270759 + g 71 -14.6 -3.05463 | CCAGCCCGGCCAGCT GCCGCCGCGCCTCG CGC CGACGTTCGGCGGC TTCGGTGCGGGCGAT RSP_3216 274112 - 272856 - | putative DNA repair exonuclease RSP_3218 274459 - 275151 + | cob(II)yrinic acid a,c-diamide reductase RSP_6169 275497 - 275306 - | hypothetical protein RSP_3217 277681 - 275582 - | Cache sensor signal transduction histidine kinase TERM 112 277951 - 277928 - H 72 -3.7 -4.57073 | opp_overlap 277940, overlap 277929 277930 GATCGTCGTGAAAAA GTCCGGGAC GCAGGG GTGCCGGGC CGGATCGCTTCGGCG TERM 113 277940 - 277970 + H 100 -14.6 -4.75404 | opp_overlap 277930 277928 277929 AAAGTCCGGGACGCA GGGGTGCCGGGCCG GAT CGCTTCGGCGCCCC TTTTTCGTGGACTTT TERM 114 278371 - 278397 + G 90 -20.8 -2.79796 | overlap 278370 TGAGCCTCTTCGTCG GGGCCGCGGGGC TCG GCCCGGCGGCCC TCTGGTCCGATCCGC TERM 115 278861 - 278885 + G 86 -14.9 -3.91897 | CGAGCTTCTGTGGGT GGCGGCCGCGG CCG CCGCGCTCGCC TTTCTGGCTGCCGAC RSP_3220 278310 - 279257 + | ABC ferric siderophore transporter, inner membrane subunit RSP_3221 279250 - 280194 + | ABC ferric siderophore transporter, inner membrane subunit RSP_3222 280191 - 280949 + | ABC ferric siderophore transporter, ATPase subunit TERM 116 283129 - 283106 - f 76 -13.8 -3.44051 | overlap 283107 CGTCGAGGAGCAGAA CGCCTCCGGC TCGG GCCGGAGGCT CTGGGTCGGGCTCAC TERM 117 283128 - 283107 - f 77 -17.3 -2.66216 | overlap 283106 GTCGAGGAGCAGAAC GCCTCCGGC TCGG GCCGGAGGC TCTGGGTCGGGCTCA RSP_3225 283255 - 284880 + | periplasmic sensor signal transduction histidine kinase TERM 118 284914 - 284904 - f 78 -6.8 -4.64676 | TTATTTGCAAGAAAA GCCT TGG AGGC TGAAGTTCAAATTTG RSP_3226 285189 - 285881 + | NAD-dependent deacetylase TERM 119 286108 - 286143 + G 73 -15.4 -3.14344 | gap 1 CTGACGCCGCAGATG GTGGC-CGCCTCGGACG ACC CGTCCGTGGCGCGCCAG TTCGTGCCCACGCTC RSP_3227 285991 - 287013 + | L-lysine 2,3-aminomutase RSP_3228 287069 - 287464 + | mannose-6-phosphate isomerase RSP_3229 288887 - 287499 - | membrane-bound lytic murein transglycosylase B RSP_3230 289290 - 289081 - | hypothetical protein TERM 120 290141 - 290120 - g 72 -11.5 -3.68302 | overlap 290109 GGAAGACCTGAACAA CGCGCCGGT CGGC ACCGGCCCG TTCAAGTTCGTGGCC RSP_3231 289521 - 291119 + | ABC peptide transporter, periplasmic binding protein TERM 121 291175 - 291130 - f 83 -14.7 -3.64236 | gap 1, opp_overlap 291140, overlap 291122 291131 291134 291135 AGTGAAACGGCTAAA GTAACGGGCAGGCGCGCCGGGA GCA CCCCGGCGCGCCT-CTCATCAT TCAGGGCTCAGATGA TERM 122 291174 - 291131 - f 78 -18.2 -2.7806 | gap 1, opp_overlap 291140, overlap 291130 291122 291134 291135 GTGAAACGGCTAAAG TAACGGGCAGGCGCGCCGGGA GCA CCCCGGCGCGCCT-CTCATCA TTCAGGGCTCAGATG TERM 123 291171 - 291134 - f 90 -17.7 -3.5332 | gap 1, opp_overlap 291140, overlap 291131 291130 291122 291135 AAACGGCTAAAGTAA CGGGCAGGCGCGCCGGGA GCA CCCCGGCGCGCCT-CTCA TCATTCAGGGCTCAG TERM 124 291170 - 291135 - f 81 -19 -2.71269 | gap 1, opp_overlap 291140, overlap 291134 291131 291130 291122 AACGGCTAAAGTAAC GGGCAGGCGCGCCGGGA GCA CCCCGGCGCGCCT-CTC ATCATTCAGGGCTCA TERM 125 291140 - 291166 + F 89 -22.3 -2.86164 | opp_overlap 291135 291134 291131 291130 291122 CTAAAGTAACGGGCA GGCGCGCCGGG AGCAC CCCGGCGCGCC TCTCATCATTCAGGG RSP_3232 291187 - 292194 + | ABC peptide transporter, inner membrane subunit RSP_3233 292202 - 293104 + | ABC peptide transporter, inner membrane subunit RSP_3235 293109 - 293957 + | ABC peptide transporter, ATPase subunit RSP_3236 293957 - 294805 + | ABC peptide transporter, ATPase subunit TERM 126 294812 - 294837 + F 73 -16.1 -2.56596 | overlap 294777 294812 GCCGCGTGAGGCTTC GGGGGCGGCCG CCCG CGGCCGTCTCC TCCCTTCGTGACCGA lguL 294958 - 295353 + | lactoylglutathione lyase RSP_3238 295423 - 296826 + | hypothetical protein TERM 127 296836 - 296874 + T 84 -16.6 -3.49475 | opp_overlap 296834 CGCTGAGACGGAAGC CCCTGACCCTCGCCGGGC TCC GCCGGGCGAGGGTCGCCG TTGTCTCCCGCTCGA RSP_3240 298525 - 297131 - | periplasmic sensor signal transduction histidine kinase RSP_3241 299196 - 298522 - | two-component transcriptional regulator RSP_3242 299440 - 300891 + | putative trypsin-like serine protease TERM 128 300934 - 300895 - f 70 -12.7 -3.28712 | gap 1 GCCTCGTCCTGACAA GCGCCGCCGTCCCGGGCG CGTCC CGCGCGGCCCGG-GGCGC TCTGCCGGATCGACC TERM 129 300959 - 300995 + F 93 -18 -3.57144 | overlap 300960 TCGACCGGCCCGTGA AGCGGATACGGGCCCC ACATC GGGGCCCGTATCGGCG TTTCCGGCTGAGCGC TERM 130 300960 - 300994 + F 86 -21.5 -2.74144 | overlap 300959 CGACCGGCCCGTGAA GCGGATACGGGCCCC ACATC GGGGCCCGTATCGGC GTTTCCGGCTGAGCG RSP_3245 301985 - 303220 + | major facilitator transporter TERM 131 303274 - 303244 - f 75 -9.7 -4.07885 | gap 2, overlap 303245 GACGGGCGCGCAAAA TCGCCTCGCGCCGCC CGC GG-GGCGCGTG-CGA CATCCGGCCATTGCA RSP_3246 303343 - 304893 + | D-aminopeptidase TERM 132 304902 - 304928 + T 77 -15 -3.14132 | opp_overlap 304903 GGTCTGAGCCAAAAA AGGGGCCGGCGC ACC GCGCCGACCCCC TTGGTCCGCCAGAGG TERM 133 304927 - 304903 - T 100 -20.7 -5.08824 | opp_overlap 304902 GTCTGAGCCAAAAAA GGGGCCGGCGC ACC GCGCCGACCCC CTTGGTCCGCCAGAG RSP_3248 306462 - 304951 - | ABC peptide transporter, periplasmic binding protein TERM 134 306432 - 306450 + g 70 -4.4 -4.38171 | overlap 306435 TCACGCTCAGCGCGA TGAGGCCG ACG CGGGCCCA TTTTCCTGTCATGTG RSP_3249 308132 - 306459 - | peptide ABC transporter ATPase RSP_3250 308956 - 308129 - | ABC peptide transporter, inner membrane subunit RSP_3251 309891 - 308953 - | ABC peptide transporter, inner membrane subunit TERM 135 310014 - 309963 - R 100 -13.7 -4.41348 | overlap 309959 309965 GGCTCCTTAAAGAAA CAGCCCTTC-GCCCGGCGCAGGGCC GCTG GGGCC-GCGCCGATCCGAAGGGCTC GAATGCCGATATGTG TERM 136 310012 - 309965 - R 90 -16.3 -3.81557 | overlap 309959 309963 CTCCTTAAAGAAACA GCCCTTC-GCCCGGCGCAGGGCC GCTG GGGCC-GCGCCGATCCGAAGGGC TCGAATGCCGATATG RSP_3252 311937 - 310159 - | peptide ABC transporter ATPase TERM 137 311110 - 311052 - G 77 -15.2 -3.55444 | opp_overlap 311093 CCTGCAGGTCCGAAA GCCGCGCGATGGGCTCGG-CCTCCACCG GCGGG CGGCCCCGGCCCGCGCCCAT-GCGCGGC ACGGCGGCCAGAAGC RSP_3253 312893 - 311934 - | acetamidase / formamidase RSP_3255 314521 - 312899 - | ABC peptide transporter, periplasmic binding protein TERM 138 314150 - 314123 - G 75 -13.4 -3.65522 | gap 1 GATCGAGCCGAAGAA GCCTGCG-CCCGG CGA CTGGGTCGCAGGC AGGGTCACGCGGTCG RSP_3257 315463 - 314543 - | ABC peptide transporter, inner membrane subunit RSP_3258 316350 - 315463 - | ABC peptide transporter, inner membrane subunit TERM 139 316300 - 316272 - G 75 -16 -3.06315 | gap 1, overlap 316263 316261 GGAACAGGCCGAAGA GCGCCAGC-GGCC GCTC GGCCAGCCGGCGC AGCGCGCCCTTGGCG RSP_3259 316927 - 316328 - | transcription antitermination protein amiC 317985 - 316924 - | putative negative amidase regulator, AmiC TERM 140 318039 - 318004 - H 85 -11.8 -4.3208 | gap 1 TTCCAGAACGCAAAA GCCCCGC-TCCAGAGGG GGA CCAACTGGATACGGGGC GCGAATGCCGGTCCG bioA 318320 - 319702 + | aminotransferase RSP_3262 319706 - 320137 + | putative thioesterase RSP_3263 320849 - 320319 - | putative copper binding protein RSP_3264 321376 - 320945 - | c-type cytochrome RSP_3265 321921 - 321535 - | hypothetical protein RSP_6171 322421 - 321918 - | hypothetical protein TERM 141 322010 - 321970 - G 90 -22 -2.70932 | gap 1, overlap 321953 321995 TCCCCCCGGCAAGGA GCGCGGGGCCTCTGCCG AGCAGGAA CGGCAGAGGCCCCGC-C TCCGAGCCGCATGGA fbpB 322534 - 323529 + | D-fructose 1,6-bisphosphatase prkB 323533 - 324411 + | phosphoribulokinase tklB 324492 - 326465 + | transketolase gapB 326476 - 327477 + | glyceraldehyde-3-phosphate dehydrogenase TERM 142 327504 - 327482 - f 80 -16.2 -3.14132 | opp_overlap 327498 327499 GGCTTCTCTGACCAA GCCGGGGGGC GCT GCCCCCCGGA CCCCCCGGGATATTT cfxB 327559 - 328623 + | fructose-1,6-bisphosphate aldolase rbpL 328650 - 330029 + | ribulose bisphosphate carboxylase TERM 143 330038 - 330072 + T 90 -14.3 -4.09685 | gap 2, opp_overlap 330044 GGCCTGAGGGCTTTT GACGAAGGGCCGGGCGG CAT CCGCCCGG-CCT-CGGC TTTTGCAGGATCACG TERM 144 330068 - 330044 - T 86 -18.5 -3.14211 | opp_overlap 330038 AGGGCTTTTGACGAA GGGCCGGGCGG CAT CCGCCCGGCCT CGGCTTTTGCAGGAT ggt 331892 - 330105 - | gamma-glutamyltransferase 1 TERM 145 331812 - 331830 + g 75 -16 -3.01712 | GGTGGGCGCCTCGGG GGCCAGCG TGT CGCTGGCC TGTTGCGCGAAGGCG RSP_3273 332725 - 331964 - | ABC multidrug/carbohydrate efflux transporter, inner membrane subunit RSP_3274 333648 - 332722 - | ABC multidrug/carbohydrate efflux transporter, ATPase subunit TERM 146 333710 - 333675 - H 73 -12.4 -3.53343 | overlap 333663 333662 333676 AACTGGCCGGCCAAA GGCCCGGCCTCTGCGG CGCA CCGCAGCGCCCGAGCG CGACTTAGGGCGCGG TERM 147 333709 - 333676 - H 74 -15.9 -2.71791 | overlap 333663 333662 333675 ACTGGCCGGCCAAAG GCCCGGCCTCTGCGG CGCA CCGCAGCGCCCGAGC GCGACTTAGGGCGCG RSP_3275 333864 - 334835 + | MoxR-like ATPase RSP_3276 334835 - 335686 + | hypothetical protein RSP_6252 335683 - 336042 + | hypothetical protein RSP_3278 336035 - 337021 + | von Willebrand factor domain-containing protein RSP_3280 337018 - 337953 + | hypothetical protein RSP_3281 337953 - 338549 + | hypothetical protein RSP_3282 338543 - 339712 + | hypothetical protein RSP_3283 339755 - 340780 + | myo-inositol 2-dehydrogenase iolD 340942 - 342786 + | acetolactate synthase iolE 342796 - 343704 + | sugar phosphate isomerase/epimerase, IolE iolB 343813 - 344619 + | hypothetical protein upgC 345942 - 344893 - | glycerol-3-phosphate transporter ATP-binding subunit ugpE 346806 - 345943 - | ABC glycerol-3-phosphate transporter, inner membrane subunit UgpE ugpA 347680 - 346799 - | ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA TERM 148 347690 - 347717 + r 85 -21.3 -2.64616 | ATGCATGGGCGAAGG GGCCGCCCGGG CCGAAA CCCGGGCGGCC TCATGTCCGTCAGCC ugpB 349022 - 347727 - | ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB TERM 149 349154 - 349174 + r 82 -11.9 -4.17762 | ACCGTCCTCGATGCA GCGAAGCGT CCG ACGTTTCGC TTATTTTCGCAAGTC RSP_3291 350916 - 349222 - | putative Na+/phosphate symporter RSP_3292 352578 - 350977 - | glucose-methanol-choline oxidoreductase TERM 150 352614 - 352568 - G 75 -15.9 -3.10715 | gap 1 CCCACGATGATGTAA TCGGCCTCCATCTCAGCTCTCC GACC GGA-AGCCGAGCCGGCGGCCGA GGCGCGAGGCATAGA RSP_3293 353578 - 352580 - | ABC branched-chain amino acid transporter, inner membrane subunit RSP_3294 354467 - 353580 - | ABC branched-chain amino acid transporter, inner membrane subunit RSP_3295 355167 - 354469 - | ABC branched-chain amino acid transporter, ATPase subunit RSP_3296 355937 - 355164 - | ABC branched-chain amino acid transporter, ATPase subunit RSP_3297 357142 - 355940 - | ABC branched-chain amino acid transporter, periplasmic binding protein RSP_3298 357349 - 358290 + | LysR family transcriptional regulator RSP_6235 358418 - 360379 + | hypothetical protein RSP_3299 360413 - 361459 + | TRAP-T family transporter periplasmic binding component RSP_6253 361596 - 362351 + | hypothetical protein TERM 151 362812 - 362848 + G 73 -16.5 -2.89881 | overlap 362789 362788 362814 GGCCCGGCTGGTCTT CAGGCGCTGCGGGCGGT TCT GCCGTCCACGGTGCCTG TCTATGCGGTGGGTG eda 362410 - 363018 + | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase cheY4 363178 - 363543 + | chemotaxis response regulator, CheY4 TERM 152 364046 - 364021 - g 77 -14.7 -3.50853 | CCGCGTCAACGACAA GGCCCTGCTCC TGTC GGAGGAGGGCC GGACCGAAGAGGCGC mcpG 363644 - 365248 + | putative methyl accepting chemotaxis protein, McpG RSP_6236 365479 - 365282 - | hypothetical protein abc1 365803 - 367158 + | putative ubiquinol-cytochrome-c reductase assembly protein TERM 153 367407 - 367386 - g 70 -10.1 -3.78934 | gap 1, overlap 367399 CCTCTCGGACAAGAA GACCGCCACC GAA GG-GGCGGCC TGCATCGGCCTTGCC RSP_3306 367270 - 367782 + | hypothetical protein TERM 154 368263 - 368234 - g 87 -20.1 -3.2614 | gap 1, opp_overlap 368230 368230 GATGGTGCAGAGGAA GCTCCGGCGA-GGC TAT GCCGTCGCCGGAGC GGGGCTTATGCCGGG RSP_3307 368034 - 368294 + | hypothetical protein RSP_3308 369758 - 368835 - | drug/metabolite exporter (DME) family protein RSP_3309 370551 - 369832 - | AraC family transcriptional regulator TERM 155 369971 - 369928 - G 74 -9.4 -4.13767 | gap 1 GGCCTGATCCGAAAA GCCGAGCTCCGCCGCCAGCTC CGC GAGGGAGCGGCCGGGCT-GGC GCAGGGCCCCCTGCG TERM 156 371220 - 371254 + H 73 -16.5 -2.64616 | CCAGCATCCGGCGGG CCGTGTCGGCCGC CCGGAGGAT GTGGCCGACACGG TGCTCTGGCTCACCG RSP_3937 371676 - 373052 + | transposase protein, Y4bF TERM 157 373408 - 373419 + F 72 -4.4 -4.59853 | CCAATTCCTACCCCC CTTG TGAC CAAG TTTTTAAGGCATTGC RSP_3313 373569 - 374861 + | phage integrase family protein RSP_3312 375559 - 374858 - | hypothetical protein TERM 158 375189 - 375214 + g 100 -19 -3.78775 | opp_overlap 375170 GTCACTGCCCACACG GCCCGCGCCG CCGTCT CGGCGCGGGC TTTGGTAATGGCCGA TERM 159 377044 - 377014 - H 85 -16.9 -3.55444 | gap 1, opp_overlap 377014 377018 CCCGCATGGCCGAAA TCAGCGCGGCGGCC CCCT GGCCGC-GCGCCGA CGAGTTATTCCGCTG TERM 160 377207 - 377161 - g 75 -15.1 -3.34013 | gap 1 GACTGTGCGAATGAA CGACGCCGCCCG-CGAGCTCAT CGAA ATGCGCCCGGCTGGCGGCTTCG ACGTGATCCTTGCGG RSP_3316 377156 - 377662 + | hypothetical protein RSP_3317 378628 - 377984 - | TetR family transcriptional regulator TERM 161 378259 - 378238 - G 73 -14.4 -3.32202 | overlap 378236 CATTGTCATAGAAGA GCCGCGCC ACCTCG GGCGCGGC CGTGGCCTCGGACAC acrB 381772 - 378653 - | cation efflux transporter TERM 162 378759 - 378733 - G 74 -7.2 -4.3014 | ACACAGGTACGAAAA CGATCCCCAGAA GCG TGCCGGTGATCG TGCCGCCGAGGATGC acrA 382952 - 381789 - | cation/multidrug efflux pump, membrane-fusion protein acoR 384884 - 383049 - | acetoin transcriptional regulator, sigma54 specific, AcoR RSP_3323 385120 - 386922 + | putative flavoprotein containing monooxygenase involved in K+ transport RSP_3324 387330 - 388274 + | LuxR family transcriptional regulator TERM 163 388328 - 388283 - f 100 -24.1 -2.91264 | gap 1, opp_overlap 388311 388315 GCTCTGAGCGAGACA GCCACGGCCGTCCGGTGCCCGA TCA TCCGGCACCGGACGGCTGTG-C ACCCCCCTTCCGGTT RSP_3325 388457 - 389962 + | capsular polysaccharide synthesis protein RSP_3326 390449 - 389976 - | protein tyrosine phosphatase RSP_3327 391252 - 390593 - | rhomboid family membrane protein TERM 164 391394 - 391363 - R 71 -10.7 -3.54543 | overlap 391364 ACGGACCCCCGGAAA GTCCACGGCCGCG TGGCAG CGCGGCCGCGGGA ACCCCTCAGAAGGCC RSP_3328 392311 - 391400 - | hypothetical protein TERM 165 392530 - 392503 - R 100 -12 -4.72272 | gap 1, opp_overlap 392502 392501 CGGCGGCATGAAAAA GCCCCGGTGCG ACGGATG CGC-CCGGGGC CCTTTGCATCGAAGC RSP_6254 392725 - 392552 - | hypothetical protein RSP_3329 393211 - 393939 + | hypothetical protein sac1 394447 - 396225 + | DASS family sodium/sulfate transporter RSP_3331 396823 - 396359 - | cupin domain-containing protein RSP_3332 397598 - 396882 - | putative transmembrane protein RSP_3333 397944 - 397591 - | hypothetical protein RSP_3334 398670 - 398053 - | HyuE hydantoin racemase RSP_3335 399546 - 398710 - | ABC spermidine/putrescine transporter, inner membrane subunit RSP_3336 400411 - 399548 - | ABC spermidine/putrescine transporter, inner membrane subunit TERM 166 400599 - 400589 - R 75 -8.2 -4.16943 | CGTCAGATCTGAAAA GCGG CAG CCGC ATCGACGCGGGCACG RSP_3337 401909 - 400644 - | ABC spermidine/putrescine transporter, periplasmic binding protein RSP_3338 402912 - 401935 - | ABC spermidine/putrescine transporter, ATPase subunit TERM 167 401967 - 401995 + g 87 -8.8 -4.7629 | overlap 401991 GCATCCGCCCCTCGT CCCAGGCGAG GTGCACGGA CTCGCCCGGG TTTTTCGGTTGCTCG RSP_3339 403124 - 403837 + | GntR family transcriptional regulator RSP_3341 403985 - 404422 + | BadM/Rrf2 family transcriptional regulator rarD 405318 - 404419 - | RarD family protein bfr 405813 - 406310 + | bacterioferritin RSP_3343 406990 - 408096 + | putative glycosyl transferase RSP_3344 409575 - 408103 - | PAS sensor diguanylate cyclase TERM 168 409709 - 409728 + H 84 -4.9 -5.00616 | opp_overlap 409703, overlap 409713 CTGAGGAAAGCAACG CCTGCTG CACCAT CTGCAGG TTTTTTCGGCGCCGG RSP_3345 409838 - 411136 + | hypothetical protein RSP_3346 413872 - 411146 - | methionine synthase (B12-dependent) RSP_3347 414948 - 413869 - | methionine synthase (B12-dependent) RSP_3349 415224 - 416102 + | hypothetical protein RSP_3350 416189 - 417142 + | Lipocalin-related protein RSP_3351 417495 - 417728 + | hypothetical protein TERM 169 418009 - 417963 - f 72 -8.8 -3.97947 | overlap 417943 CCGACGCACGAGAAA TCGACCGCGCAGC-GCCGGC AGGCGCAGG ACCGGCTGCTG-GCGGCCAA TCCGCCTCTGGCGGC RSP_6176 418148 - 418342 + | putative tail fiber assembly protein gpFI 418480 - 418611 + | major tail sheath protein FI gpFII 418623 - 419120 + | putative phage tail tube protein FII TERM 170 419357 - 419373 + G 95 -4.3 -5.40072 | overlap 419341 419358 GACTTCCTCGGCCTC TCCGCGG CGG TCGTGGG TTTTTTTGCGACGGC RSP_3353 419135 - 419431 + | Phage related tail protein RSP_3355 419596 - 421923 + | putative tape measure protein gpU 421946 - 422326 + | putative phage tail protein U gpX 422323 - 422535 + | Phage tail component protein X gpD 422532 - 423506 + | Phage tail protein D RSP_3360 423689 - 424477 + | adenine specific DNA methyltransferase, D12 class TERM 171 424516 - 424482 - f 85 -17.9 -3.15427 | gap 1 AAGAGGGCTGAGGAA GGT-GCCGTGGGCGGA GCGA TCCGCCCGCGGCGACC TTGGCAGGGTATGAG TERM 172 424667 - 424712 + F 100 -24.3 -4.00756 | gap 1, overlap 424650 424670 AGGTTGCGGCGCCAT GAC-GCATCACCTGCCTTGCTC CTT GAGCAAGCCAGGTGATGCTGTC TTCTTTGATGGCGTG TERM 173 424670 - 424708 + F 100 -24.8 -3.36839 | overlap 424650 424667 TTGCGGCGCCATGAC GCATCACCTGCCTTGCTC CTT GAGCAAGCCAGGTGATGC TGTCTTCTTTGATGG RSP_3361 424806 - 425873 + | putative restriction endonuclease or methylase RSP_6234 427057 - 426041 - | hypothetical protein RSP_3363 427451 - 427972 + | hypothetical protein proC 428054 - 428821 + | pyrroline-5-carboxylate reductase csaA 428818 - 429150 + | protein secretion chaperonine RSP_3366 429147 - 430094 + | D-isomer specific 2-hydroxyacid dehydrogenase RSP_3367 430303 - 430968 + | hypothetical protein RSP_3368 432588 - 431269 - | periplasmic sensor diguanylate cyclase TERM 174 432548 - 432507 - G 79 -15.7 -3.28712 | CGGCGCTGGTCAGAA GCGGCAGGACGGCGAGGAC CAGC GCCAGCGCCATCCAGCCGC GGAGCGATTGCCGAT RSP_6179 432875 - 432720 - | hypothetical protein RSP_3369 434230 - 432872 - | Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A RSP_3370 435638 - 434217 - | TRAP dicarboxylate family transporter DctM subunit RSP_3371 436392 - 435820 - | TRAP-T family transporter small inner membrane subunit TERM 175 436435 - 436412 - R 100 -19.6 -4.18018 | TCTCCCGATGGAAAA GGCCCCGGGA GAGG TCCCGGGGCC GGATCGCGTCAGAGC RSP_3372 437583 - 436444 - | TRAP-T family transporter periplasmic binding protein TERM 176 436636 - 436660 + g 74 -9.3 -4.07568 | gap 1, opp_overlap 436631 CGAAAGGATATCCTT CGGGGTC-CG ATGCAC CGCGACCCCG TTTTCGGCCGCGAGC TERM 177 437545 - 437562 + g 80 -9.8 -4.30719 | opp_overlap 437542 437545, overlap 437559 GGTGCGCAGGAACGA GCGGCG CGAATA CGCCGC TTTCTTCTCGAAAGC RSP_3373 438966 - 437761 - | ABC efflux transporter, inner membrane subunit RSP_3374 439603 - 438968 - | ABC efflux transporter, ATPase subunit RSP_3375 440943 - 439666 - | HlyD family membrane fusion protein aroQ 441453 - 441010 - | 3-dehydroquinate dehydratase RSP_3377 441633 - 442517 + | glutathione S-transferase family protein TERM 178 443053 - 443072 + G 72 -3.5 -4.56597 | TCCGGCCCGAGGCCC GGCCG GTGCAGGTGG CGGCC TTTTTCACCACGCCG RSP_3378 442581 - 443192 + | hypothetical protein RSP_3379 443192 - 443842 + | hypothetical protein RSP_3380 444078 - 444743 + | hypothetical protein TERM 179 444799 - 444822 + T 100 -19.6 -4.56597 | opp_overlap 444791 CAGGCAACCTGTGAC GCCGGGCGGA CCCT TCCGCCCGGC TTTTTCAGGGCAGAA RSP_3381 445801 - 444827 - | NAD(P)H -dependent quinone oxidoreductase RSP_3382 446205 - 445798 - | hypothetical protein RSP_3383 447067 - 446249 - | hypothetical protein RSP_3384 448401 - 447238 - | mandelate racemase/muconate lactonizing enzyme family protein RSP_3385 449429 - 448482 - | LysR family transcriptional regulator RSP_3386 449690 - 450646 + | TRAP-T family transporter periplasmic binding protein RSP_3387 450656 - 452632 + | TRAP-T family transporter fused small and large inner membrane subunits RSP_3388 452647 - 453729 + | putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase ttuC RSP_3389 453740 - 454813 + | isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase RSP_3390 455769 - 454987 - | ABC Fe3+-siderophores transporter, ATPase subunit RSP_3391 456800 - 455766 - | ABC Fe3+-siderophores transporter, inner membrane subunit TERM 180 456176 - 456152 - G 85 -17.1 -3.47841 | AGAGGCAGAGGAGAA GCCCCGCCAGC GCG GCCGGCAGGGC GAGCGTCACGTCGGG RSP_3392 457801 - 456797 - | ABC Fe3+-siderophores transporter, periplasmic binding protein TERM 181 458254 - 458220 - R 100 -25.8 -3.40403 | overlap 458194 458246 458247 GCGCGCCGATGAGAA CGGGGCCGGCCGTTCC CCC GGAACAACCGGCCCCG AAGGTCGCGCGGGTG RSP_3393 459068 - 458274 - | ABC opine/polyamine transporter, inner membrane subunit RSP_3395 459951 - 459079 - | ABC opine/polyamine transporter, inner membrane subunit RSP_3396 461066 - 459948 - | ABC opine/polyamine transporter, ATPase subunit RSP_3397 462111 - 461068 - | ABC opine/polyamine transporter, periplasmic binding protein RSP_3398 462838 - 462185 - | hypothetical protein RSP_3399 463651 - 462848 - | carbon-nitrogen hydrolase family protein RSP_3400 464631 - 463741 - | LysR family transcriptional regulator TERM 182 465818 - 465760 - g 75 -15.2 -3.36327 | opp_overlap 465805 CGAGCTGATGGAGAA GGGCGAGCGCCCGAGCC-CGGCGCGCGA GCCTG TCGAGCTCGGCGGC-CGGACGCTCGACC TCCGGTTCCTGCCGA RSP_6180 464855 - 466054 + | hypothetical protein RSP_3401 466134 - 466535 + | diguanylate cyclase RSP_3402 466542 - 469187 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) RSP_3403 470036 - 469194 - | hypothetical protein TERM 183 470911 - 470935 + G 76 -7.9 -4.3739 | gap 1 CGCAGGCTCTGGCCC GATGCG-CCG TCGACC CGGACGCATC TTTTGTCGACCCCTG RSP_3404 470287 - 471384 + | hypothetical protein gntR 471417 - 472136 + | GntR family transcriptional regulator pdxA 473169 - 472183 - | 4-hydroxythreonine-4-phosphate dehydrogenase 2 serA 474145 - 473195 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding subunit dapA 475026 - 474142 - | dihydrodipicolinate synthetase RSP_3409 476526 - 475030 - | TRAP-T family transporter large inner membrane subunit TERM 184 475681 - 475699 + g 79 -16 -3.30124 | TTTCTCGGGCGTCTT CGAGGCGC GGC GCGCCTCG TTATAGGCGATCCAC TERM 185 476537 - 476586 + r 77 -17.8 -2.67428 | overlap 476534 476533 TCCATGGGCGCGTCC CGATCCGAGGCCGGGCTCCGGT CCTGTC ACCGGAGCCCGGCGTTGGCCTG TCAGTTGTTCATGCC RSP_3410 477540 - 476587 - | TRAP-T family transporter periplasmic binding protein RSP_3411 478016 - 477576 - | TRAP-T family transporter small inner membrane subunit RSP_3412 478244 - 479422 + | Iron-containing alcohol dehydrogenase RSP_3413 480270 - 479470 - | ABC Fe+3-siderophore transporter, ATPase subunit RSP_3414 481307 - 480267 - | ABC Fe+3-siderophore transporter, inner membrane subunit RSP_3415 482308 - 481304 - | ABC Fe+3-siderophore transporter, inner membrane subunit TERM 186 481623 - 481576 - G 72 -13.2 -3.46602 | overlap 481573 481577 CGCCGCAGAGGAGAA CCGCCCCCGCCGCCGCGACGAG GCGG CTCCGCGCGACGGAGAGGCCGA GGCCCGCCGCTGCAT RSP_3416 483453 - 482476 - | ABC Fe+3-siderophore transporter, periplasmic binding protein RSP_3417 483781 - 485928 + | TonB dependent outer membrane ferrichrome-iron receptor TERM 187 486021 - 486062 + T 93 -19.3 -3.53012 | gap 1, overlap 486022 CGGACGGCCTCGGAC CCGGGGCGGCGCTCC-CGCC TCA GGCCCGGCGCGCCGCCCCGC TTTCGGGCGGCGCCG TERM 188 486022 - 486061 + T 87 -22.8 -2.71712 | gap 1, overlap 486021 GGACGGCCTCGGACC CGGGGCGGCGCTCC-CGCC TCA GGCCCGGCGCGCCGCCCCG CTTTCGGGCGGCGCC RSP_3418 486333 - 486040 - | AraC family transcriptional regulator RSP_3419 487758 - 488336 + | hypothetical protein TERM 189 488467 - 488507 + F 81 -13.1 -3.85698 | opp_overlap 488460 ACGCAAGATTGCGGC CGGACCCTGACGCTGCCGG CCG CCGGAGGTGCAGGGGTCCG TTTCTGCCCGCGCAC RSP_3420 488557 - 490131 + | methyl-accepting chemotaxis protein RSP_3421 490128 - 490703 + | hypothetical protein RSP_3422 490715 - 491281 + | hypothetical protein xthA1 492239 - 491472 - | exodeoxyribonuclease III RSP_3424 492281 - 493075 + | hypothetical protein RSP_3425 493973 - 493395 - | hypothetical protein RSP_3426 495172 - 493970 - | hypothetical protein TERM 190 495414 - 495459 + H 72 -3.2 -4.55798 | gap 2, opp_overlap 495423 495428, overlap 495446 TTGCGAACGCTACGC TGACACGAAGCCAATGGGCGGC CCCT GCCGCCCCATCGCAT-G-GTCA TTTTCATTTGGAGTA RSP_3427 495626 - 497350 + | hypothetical protein TERM 191 497973 - 497955 - gf 78 -9.5 -4.11216 | CTTCGATCCGCAAAA GCCCCGC GACCG GCAGGGC CTCATAGTGCCCGTG RSP_3428 497401 - 499359 + | hypothetical protein RSP_3429 499331 - 501160 + | hypothetical protein RSP_3430 501245 - 501910 + | transcriptional regulator RSP_3431 501907 - 503259 + | periplasmic sensor signal transduction histidine kinase TERM 192 503465 - 503482 + G 71 -6.2 -4.30576 | TCAGAACCAAACTGG CCGCGG CATTCA CCGTGG TTTTCGTCATGGCGG RSP_3432 503437 - 504996 + | methyl-accepting chemotaxis protein RSP_3433 505061 - 505534 + | CopG family transcriptional regulator RSP_3434 506194 - 505826 - | hypothetical protein RSP_3435 506295 - 506627 + | DNA-binding protein RSP_3436 507595 - 506714 - | LysR family transcriptional regulator RSP_3437 507715 - 508935 + | aspartate aminotransferase RSP_3438 508932 - 509357 + | translation initiation inhibitor RSP_3439 509406 - 510614 + | aminotransferase RSP_3440 510680 - 511465 + | putative short chain dehydrogenase TERM 193 511895 - 511943 + G 70 -14.3 -3.16564 | overlap 511846 CGGCACGGGCCTGCC GGTCTGGTGCGCGGGCGTGGCCG CTC CGCCCTCGGTCGCGGGCCTGACC TTCGTGGCCTGGGAG RSP_3441 511482 - 512204 + | hypothetical protein TERM 194 512245 - 512278 + F 81 -10.2 -4.3739 | gap 1, overlap 512246 512247 CCTTCCGTCTCCCCA CTCCCCGGGCAAGGG CTCGT CCCT-GCCCGGGGCC TTTTGTGAAAGGCTC TERM 195 512246 - 512277 + F 72 -13.7 -3.22113 | gap 1, overlap 512245 512247 CTTCCGTCTCCCCAC TCCCCGGGCAAGGG CTCGT CCCT-GCCCGGGGC CTTTTGTGAAAGGCT TERM 196 512247 - 512276 + F 77 -17.2 -2.52946 | gap 1, overlap 512246 512245 TTCCGTCTCCCCACT CCCCGGGCAAGGG CTCGT CCCT-GCCCGGGG CCTTTTGTGAAAGGC RSP_3442 512299 - 513240 + | 2-hydroxyacid dehydrogenase TERM 197 513285 - 513243 - T 71 -11.9 -3.64703 | opp_overlap 513254 513255, overlap 513244 CCGCGGCTACTGAAA GGCGGCCCGCGCCCCG-CCCC GGC GAGCCCGGGGCGCAGGCT-CC GGTTCAGCAGCAGGC RSP_3443 514433 - 513468 - | putative acetamidase/formamidase TERM 198 513711 - 513732 + g 74 -9.3 -4.09685 | GCCCAGCTCGATCTC GGGGGCGGC GGGC GCCGTGCCC TTTTCGAGCGTGAAG RSP_3444 515629 - 514445 - | putative Xaa-Pro aminopeptidase RSP_3445 516269 - 515634 - | GntR family transcriptional regulator RSP_3446 517546 - 516266 - | allantoate amidohydrolase RSP_3447 518538 - 517543 - | putative dehydrogenase RSP_3448 519203 - 518535 - | GntR family transcriptional regulator RSP_3449 520258 - 519194 - | putative allophanate hydrolase subunit 2 RSP_3450 520992 - 520255 - | hypothetical protein RSP_3451 522347 - 521046 - | TRAP-T family transporter large inner membrane subunit RSP_3452 522977 - 522357 - | TRAP-T family transporter small inner membrane subunit TERM 199 522950 - 522976 + g 71 -15.9 -2.63715 | gap 1 GCCGGAGAGGGGGAA TGCGGGCGGGGC CTTC GCCCCGC-CGCA TCCTGTCCCGTCAGT RSP_3453 523970 - 522987 - | TRAP-T family transporter periplasmic binding protein RSP_3454 524145 - 524915 + | hypothetical protein RSP_3455 524927 - 525784 + | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase RSP_3456 525796 - 526722 + | putative dihydrodipicolinate synthase TERM 200 526787 - 526814 + F 100 -19.2 -4.05788 | CCGCCTCGTGCACGG TCACCCTCGGCG GACG CGCCGGGGGTGA TTTCGTTTCGGGGGC RSP_3457 527231 - 528094 + | ABC polar amino acid transporter, periplasmic binding protein RSP_3458 528164 - 528904 + | ABC polar amino acid transporter, ATPase subunit RSP_3459 528909 - 529589 + | ABC polar amino acid transporter, inner membrane subunit RSP_3460 529593 - 530258 + | ABC polar amino acid transporter, inner membrane subunit RSP_3461 530296 - 531222 + | N-carbamyl-D-amino acid amidohydrolase RSP_3462 531235 - 532692 + | dihydropyrimidinase RSP_3463 532689 - 533330 + | putative hydantoin racemase RSP_3464 533327 - 534256 + | LysR family transcriptional regulator RSP_3465 534253 - 534861 + | hypothetical protein RSP_3466 535219 - 536508 + | hypothetical protein RSP_3467 536510 - 537532 + | hypothetical protein RSP_3468 537525 - 538616 + | 3-oxoacyl-(acyl carrier protein) synthase RSP_3469 538613 - 539614 + | hypothetical protein RSP_3470 539611 - 540390 + | hypothetical protein RSP_3471 540413 - 541099 + | hypothetical protein RSP_3472 541494 - 541096 - | hypothetical protein RSP_3474 544156 - 541487 - | hypothetical protein TERM 201 544417 - 544431 + G 71 -9.2 -4.07568 | ATCGTCGCGGTCAAG GCGCTG AAC CGGCGC TTTTCGGGCAACGAC RSP_3475 544270 - 546276 + | Serine/threonine protein kinase TERM 202 546310 - 546292 - f 78 -5.8 -4.56597 | opp_overlap 546291 546292 TCCCCGGTTGAAAAA GGGGCGCG ATT CGGGCACC ATTTTCCTGGGCCGC RSP_3476 546374 - 547447 + | hypothetical protein RSP_3477 547466 - 547996 + | hypothetical protein RSP_3478 547993 - 549510 + | hypothetical protein RSP_3479 549562 - 550053 + | hypothetical protein RSP_3480 550086 - 550793 + | hypothetical protein TERM 203 551905 - 551924 + GF 79 -7.8 -4.52589 | overlap 551900 CCTGCATGCGCCCGC GGCCCAGG GGGG CTTGGGTC TTTTCTATACCACCG RSP_3481 550793 - 552658 + | hypothetical protein TERM 204 552770 - 552813 + GF 72 -13.8 -3.15544 | gap 2, overlap 552797 GCGTGCGGCTGTCGA TGGCGGCGCGCGACGTGGCG GCGCTG CGCCCCG--GCGCGCCGCCC TTCGTCGAGGTCGAG RSP_3482 552622 - 553620 + | hypothetical protein TERM 205 553939 - 553981 + G 77 -11.2 -4.15044 | gap 2, overlap 553940 GGCGCGAGCCCCTGC GCG-CG-CCGCTCGCGCCGC GCGAG GCGGCGCTGGCGGTCGACGA TTTCTTCGCGGCGCC TERM 206 553940 - 553980 + G 71 -14.7 -3.08812 | gap 2, overlap 553939 GCGCGAGCCCCTGCG CG-CG-CCGCTCGCGCCGC GCGAG GCGGCGCTGGCGGTCGACG ATTTCTTCGCGGCGC TERM 207 554513 - 554545 + G 71 -14.8 -3.05384 | gap 1 GGCCGCGCTGGTGAC GCCGCGGGGGCCGGG ATAT CTCGGCCCC-GAGGC TTCCATCGAGGGCGC RSP_3483 553614 - 554843 + | hypothetical protein TERM 208 554864 - 554875 + G 74 -7.2 -4.30576 | GCATGTTCCTTGCGG GCGC GGGG GCGC TTTTGCTCGTGGCGG RSP_3484 554836 - 555288 + | hypothetical protein RSP_3485 555297 - 556625 + | hypothetical protein RSP_3486 556690 - 558051 + | OmpA family outer membrane protein TERM 209 558227 - 558284 + G 87 -19.9 -3.14463 | gap 1 GGGCTGCATCGCGGT GGGCTGGCTTCTGT-CGCTGCTGGCAGC CCA GCTGCGGGCGGCGCGCAGGAACCAGCTC TTCGTGACCGAGCTT TERM 210 559880 - 559908 + G 81 -12.4 -3.92659 | gap 1, overlap 559874 559880 CCCGTTCCCGACCGA G-GCGGCCCGCTG GCAC CAGCTGGCCGCGC TTTCCCTTTTCGGCA RSP_3487 558051 - 561572 + | hypothetical protein RSP_3488 561562 - 562053 + | hypothetical protein RSP_3489 564366 - 562063 - | hypothetical protein RSP_3490 566791 - 564383 - | hypothetical protein TERM 211 564496 - 564470 - G 70 -10 -3.85698 | overlap 564473 GGCGGCTTCGAGAAA GAGCCGCGCACC GCC GGAGCGCAGGTC GATGAGGAACCGCAA TERM 212 565671 - 565636 - G 81 -18.3 -3.01712 | gap 1 CCGCCGCCGTGAAGA GGCCGGGGACCGGCGC GTCGA GCGC-GGCCCCCGACC GACGGATCACCACGG RSP_3491 567639 - 566791 - | hypothetical protein RSP_3492 568389 - 567643 - | protein phosphatase 2C-like RSP_3494 568532 - 569296 + | OmpA/MotB domain-containing protein RSP_3493 570219 - 569293 - | hypothetical protein RSP_3495 570626 - 570216 - | hypothetical protein RSP_3496 572137 - 570626 - | Zinc carboxypeptidase A metalloprotease (M14) TERM 213 570749 - 570694 - G 72 -13 -3.53563 | gap 1, overlap 570682 570695 AGAGGTCGCGCCAAA TGGCGCCGACGAGGCGGCGGTCG-CGC GCC GCGGCGAGCGCGCCCGCAGCGGCGCCC CGCTCGGCCCAGACC TERM 214 570748 - 570695 - G 72 -16.5 -2.71924 | gap 1, overlap 570682 570694 GAGGTCGCGCCAAAT GGCGCCGACGAGGCGGCGGTCG-CGC GCC GCGGCGAGCGCGCCCGCAGCGGCGCC CCGCTCGGCCCAGAC TERM 215 575056 - 575080 + G 75 -13.6 -3.53012 | gap 1 CCGGATCGGCCCCGC GACGCGGGACG CGCT CG-CCCGCGTC TTTGCCGCGCAGGGG RSP_3497 572258 - 575173 + | caspase-1, p20 RSP_6182 575170 - 575628 + | hypothetical protein RSP_3498 575630 - 577798 + | antifreeze protein, type I RSP_3499 579061 - 577820 - | short chain dehydrogenase RSP_3500 580141 - 579125 - | ABC sugar transporter, periplasmic binding protein TERM 216 579683 - 579695 + g 78 -9.1 -4.42238 | opp_overlap 579683 579677 CGAGGAATAGAAGAA GGCCA CCT TGGCC TTTTCCTTGCCCTCG TERM 217 579763 - 579739 - G 76 -8.6 -4.26076 | gap 2, opp_overlap 579738 579752 579754 CCATGTCGACCAAAA GGC-CG-CCGAG CTG CTCGGGCGTGCC CTGGTTGATGTAGTA RSP_3501 581159 - 580176 - | ABC sugar transporter, inner membrane subunit RSP_3502 582166 - 581156 - | ABC sugar transporter, inner membrane subunit RSP_3503 583634 - 582159 - | sugar ABC transporter ATPase RSP_3505 583851 - 584789 + | DeoR family transcriptional regulator RSP_3506 584793 - 586322 + | autoinducer-2 (AI-2) kinase RSP_3507 586352 - 586660 + | hypothetical protein TERM 218 586706 - 586737 + F 85 -15.8 -3.61398 | overlap 586708 GCGCTGCCCGACCGG TCCCGGCTGCGGAG GATC CTCCGCAGCCGGTC TTCTTGCACCCGGCA TERM 219 586708 - 586735 + F 100 -22.8 -3.38812 | overlap 586706 GCTGCCCGACCGGTC CCGGCTGCGGAG GATC CTCCGCAGCCGG TCTTCTTGCACCCGG RSP_3508 587083 - 588405 + | acetamidase/formamidase TERM 220 588512 - 588459 - T 82 -18.3 -2.87132 | gap 2 GCGCCTCTGCAGAGA TC-CTGCACGG-ATCCGGCAGGCCG GGGAGA CGGCCTGCCGGATACCGGGAAGCGA GATCCGATGACGGCT TERM 221 588600 - 588563 - T 100 -19.1 -4.03234 | overlap 588581 CTGCGGCCAGAGAAA GCGCACGGGCGGCACAC AGGC GTGTGCCTTCCGCGCGC CTCCCTGCCACCGTC expE1 589222 - 588614 - | hemolysin-type calcium-binding region, RTX RSP_3510 589356 - 589709 + | hypothetical protein RSP_3511 589709 - 590371 + | two component transcriptional regulator RSP_3512 590368 - 591711 + | periplasmic sensor signal transduction histidine kinase TERM 222 592256 - 592226 - f 78 -6.7 -4.63932 | gap 1, opp_overlap 592229, overlap 592227 GATGGCCGAACAAAA TCGGCGCGGGGCGA TTGT CCGCCCCG-GCGGG GCGCCCGCCGCCCTC RSP_3513 592286 - 593266 + | diguanylate cyclase with GAF sensor RSP_3514 594364 - 593360 - | transcriptional regulator TERM 223 594224 - 594237 + g 70 -2.3 -4.58663 | overlap 594220 GACCTTCCAGGCGAC GCGGA TCTG TCGGC TTTTTGCAGCATCGT RSP_3515 594499 - 595536 + | ABC polyamine/opine transporter, periplasmic binding protein RSP_3516 595543 - 596532 + | ABC polyamine/opine transporter, ATPase subunit RSP_3517 596537 - 597385 + | ABC polyamine/opine transporter, inner membrane subunit RSP_3518 597387 - 598172 + | ABC polyamine/opine transporter, inner membrane subunit RSP_3519 598216 - 599229 + | putative proline racemase TERM 224 599265 - 599294 + T 83 -15.7 -3.67597 | gap 1, overlap 599266 GGGCCGGCCGCTCCC CGCCGGG-CTGCCG ACG CGGCAGGCCCGGCA TTCTTCCCTCGGGGC TERM 225 599266 - 599293 + T 81 -19.2 -2.80344 | gap 1, overlap 599265 GGCCGGCCGCTCCCC GCCGGG-CTGCCG ACG CGGCAGGCCCGGC ATTCTTCCCTCGGGG RSP_3520 601145 - 599523 - | peptide ABC transporter ATPase RSP_3522 602027 - 601149 - | ABC peptide transporter, inner membrane subunit RSP_3523 603003 - 602038 - | ABC peptide transporter, inner membrane subunit RSP_3524 604673 - 603069 - | ABC peptide transporter, periplasmic binding protein TERM 226 604589 - 604566 - G 70 -12.4 -3.35679 | gap 1 GGCGGGCAGGCAGAA GGCGCCGGCCA CGG CGGCC-GCGCC CCCCAGAAAGGCCCG RSP_3525 606370 - 604763 - | ABC peptide transporter, periplasmic binding protein RSP_3526 606532 - 608004 + | amidase RSP_3527 608012 - 609046 + | acetylpolyamine aminohydrolase TERM 227 609066 - 609031 - T 73 -16.8 -2.66733 | TCTGAAGGGATATGA GGCGGAGCGCGGCTGA GCCC TCAGCCGCCCCCCGCG GAGTCAGAAGTCGTC RSP_3528 609720 - 609070 - | TetR family transcriptional regulator RSP_3529 610660 - 609797 - | hypothetical protein RSP_3530 612260 - 610665 - | oxidoreductase RSP_3532 613921 - 612257 - | AMP-binding enzyme TERM 228 613982 - 613960 - R 93 -16.2 -3.82084 | GGGCAACAGGAAGAA GTGCCCGCCC GAT GGGCGGGCGC TGAGGTCAGTGGGCG RSP_3533 615475 - 613988 - | aldehyde dehydrogenase (acceptor) TERM 229 615504 - 615527 + r 77 -10.9 -3.92542 | overlap 615505 GGAGGGAGTTTCGTC GCGGCCGCC TCAGAC GGCGGCCGG TTCTTTCGCGGTCAG RSP_3534 616916 - 615513 - | hypothetical protein TERM 230 616583 - 616569 - G 70 -2.1 -4.56597 | opp_overlap 616580, overlap 616572 GCCCGTGGTGAAAAA GATCC GGTTG AGATC GCCCGGCGTCAGCGT TERM 231 617056 - 617018 - H 74 -12.8 -3.61517 | gap 1, opp_overlap 617025, overlap 617019 617052 ACTCCGGCGGAACAA GTCAACATTTCTGATTG CCCGAT CAATCAGAAATGTTG-C GATGGCCTCGCAGCC RSP_3535 617158 - 619125 + | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase RSP_3536 619190 - 620389 + | beta-ketoadipyl CoA thiolase TERM 232 620495 - 620522 + F 93 -19.2 -3.44051 | opp_overlap 620491 AGCGGGACAGAGGCA GCCGCAGCCGTC GCGC GACGGTTGCGGC TTCTCCTGCTGCCGC RSP_3537 620593 - 621621 + | alcohol dehydrogenase, zinc-containing TERM 233 621642 - 621693 + T 74 -12.8 -3.59979 | overlap 621643 621646 621646 GCCCGGGCAGGCGCC CGCACCGGACCCGCTTCCCGGGGC AAGA GCCTCAGGGAGCGGGCTGGGTCTG TTTGAGATAGGCCAG TERM 234 621643 - 621691 + T 70 -13 -3.38046 | gap 1, overlap 621642 621646 621646 CCCGGGCAGGCGCCC GCACCGGACCCGCTTCCCGGGGC AAGA GCCTCAGGGAGCGGG-CTGGGTC TGTTTGAGATAGGCC TERM 235 621646 - 621689 + T 74 -14.4 -3.26031 | overlap 621646 621643 621642 GGGCAGGCGCCCGCA CCGGACCCGCTTCCCGGGGC AAGA GCCTCAGGGAGCGGGCTGGG TCTGTTTGAGATAGG TERM 236 621646 - 621688 + T 77 -17.7 -2.55297 | gap 1, overlap 621643 621642 621646 GGGCAGGCGCCCGCA CCGGACCCGCTTCCCGGGGC AAGA GCCTCAGGGAGCGGG-CTGG GTCTGTTTGAGATAG RSP_3538 622425 - 621673 - | hypothetical protein TERM 237 622451 - 622432 - R 74 -12.8 -3.62096 | opp_overlap 622431 622430 622444 GCTCATCATGCGAAA CGGCGCCC TTTC GGACGCCG CCCTTTTCTGGTGCC RSP_3539 624168 - 622498 - | hemolysin-type calcium-binding region, RTX TERM 238 623142 - 623107 - G 70 -13.3 -3.35679 | GTTCTCGATCGAGAA CAGCGTATCCGTGCC TTCCTC GGCACTGATGCGCTG CGCCTGACCCTGCAG RSP_3540 630388 - 624206 - | putative adhesin or RTX toxin TERM 239 626033 - 626057 + g 76 -15.7 -3.23216 | GACCCCGCCCAGGAG CAGCGTGCCCG TGG CGGGCAGGCTG TTGATGGTGATCGAG TERM 240 630648 - 630666 + H 79 -11 -4.09243 | TGCAACGGTCGCCCT GACTGTCC GAA GGACGGTC TTTTCAGCCCATGTG RSP_3542 630985 - 633054 + | hypothetical protein RSP_3541 633286 - 633008 - | hypothetical protein TERM 241 633870 - 633911 + G 77 -7.1 -4.48221 | overlap 633866 633863 633862 633872 GCCCTGACCGAGGAG CAGCAGGAAGAGTTCCGGC AGCT GCTGGCTTCCTTCCTGCGG TTTTATGCCTTCATC RSP_3543 633384 - 634484 + | type I restriction-modification system restriction subunit RSP_3544 634618 - 634920 + | hypothetical protein RSP_3545 634975 - 635529 + | hypothetical protein RSP_3546 635979 - 635584 - | hypothetical protein TERM 242 635982 - 636019 + r 76 -7.7 -4.36914 | gap 1, opp_overlap 635990 635993, overlap 635982 635983 GGCATAGAAACACAT C-TCGAAGATCAGGCTGC GAG GCCGCCAGGTTTTCGACG TTTTCTCGAACCGGC RSP_3547 638716 - 636449 - | ribonucleotide reductase TERM 243 638340 - 638296 - G 73 -9.8 -3.96298 | gap 1, overlap 638292 CATCCATGAAGGAAA GGGGCCCCGAGGCG-TCGGCG GCGA CGCCCTTCACCTCGGCGCCGC GCGGGCGGATGGTCG RSP_3548 638868 - 639299 + | hypothetical protein hisG 640002 - 639292 - | ATP phosphoribosyltransferase catalytic subunit hisZ 641096 - 639999 - | ATP phosphoribosyltransferase regulatory subunit TERM 244 641088 - 641049 - G 81 -15.6 -3.53012 | opp_overlap 641049 CCCCGCCGCCTGAAA GGCCGCGAACAGCGCC TCGGCCTC GGCGCGGACCGCGGCC TTGGTCACGAGAGCA hisS 642577 - 641093 - | histidyl-tRNA synthetase RSP_3552 642665 - 642865 + | hypothetical protein dnaE 646505 - 643014 - | DNA polymerase III subunit alpha xdhA 646688 - 648145 + | xanthine dehydrogenase, small subunit TERM 245 649305 - 649355 + G 70 -12.5 -3.34517 | overlap 649303 GGTCGGGGGCGGACG TGCCGCGGATCCGGCGGGAAG-GCC GGG GGCGCTGCCC-CCGGACCCCCGGGA TATTTCCGCCAGAAT xdhB 648142 - 650619 + | xanthine oxidase xdhC 650612 - 651553 + | molybdenum cofactor sulfurylase RSP_3557 651550 - 653073 + | ABC transporter ATPase RSP_3558 653092 - 654174 + | ABC transporter, inner membrane subunit RSP_3559 654174 - 655106 + | ABC transporter, inner membrane subunit RSP_3560 655153 - 656247 + | ABC transporter periplasmic-binding protein TERM 246 656261 - 656302 + F 89 -18.7 -3.2964 | gap 1, opp_overlap 656248 656270, overlap 656262 656271 656274 AAGCCCTGCCCCATT CGTTCAAGAGGCCCGGGCCG GAA CGGCCCGGGCCTCT-GGCCA TTCTGGACGCGCTTT TERM 247 656262 - 656301 + F 86 -22.2 -2.57463 | gap 1, opp_overlap 656248 656270, overlap 656261 656271 656274 AGCCCTGCCCCATTC GTTCAAGAGGCCCGGGCCG GAA CGGCCCGGGCCTCT-GGCC ATTCTGGACGCGCTT TERM 248 656294 - 656270 - f 100 -24.3 -3.02511 | opp_overlap 656262 656261 656271 656274, overlap 656248 CCCATTCGTTCAAGA GGCCCGGGCCG GAA CGGCCCGGGCC TCTGGCCATTCTGGA TERM 249 656487 - 656499 + G 75 -10.5 -3.93256 | opp_overlap 656435 AGGATGCGGCTCCTC GGCGC GCG GCGCC TTCTTTGGCGGTATC TERM 250 656952 - 656976 + G 73 -15 -3.2697 | overlap 656952 CGATGCGACCTCCTC GGCCCCGGTC CCCGC GACCGGGGTC CTTTTGTGCCTGTCT TERM 251 656952 - 656977 + G 93 -12.6 -4.46155 | gap 1, overlap 656952 CGATGCGACCTCCTC GG-CCCCGGTC CCCGC GACCGGGGTCC TTTTGTGCCTGTCTA RSP_3561 656475 - 657032 + | hypothetical protein TERM 252 657526 - 657499 - g 71 -8.3 -4.07568 | opp_overlap 657521 GCGGTTCTGCGAAAA CCCCGGCCCCA TCGTGG TGGGGGCGGCG CAGGGCGCGAGCTGC sqr 657065 - 658345 + | sulfide-quinone reductase TERM 253 658350 - 658396 + G 75 -5.7 -4.4891 | gap 1, overlap 658353 658353 GCAAGGGATGACCCC TTGCCAATCCGCGCGGCGCGGG CCAG CCTGCGCCGTATGGACAG-CGA TTTTCTCATCATCGG TERM 254 658566 - 658582 + G 74 -10.1 -4.15044 | overlap 658549 CCGGTGGTCGAGCTG TCGCTCG CCT CGGGCGA TTTCTTCCGGGCAGC RSP_3563 658350 - 659456 + | putative FAD-dependent glycerol-3-phosphate dehydrogenase protein RSP_3564 659453 - 660088 + | Generic methyltransferase TERM 255 660644 - 660695 + G 73 -10.1 -3.89695 | opp_overlap 660647 660648, overlap 660648 TGCTGCCTTCCACGA GAACTGGCGCGGCGCCG-GCCGCGC GGGT GTGCCGCGCGGCGCC-TACCATTTC TTCTATTTCTGCCGC TERM 256 660648 - 660691 + G 86 -9.5 -4.54553 | opp_overlap 660647 660648, overlap 660644 GCCTTCCACGAGAAC TGGCGCGGCGCCG-GCCGCGC GGGT GTGCCGCGCGGCGCC-TACCA TTTCTTCTATTTCTG RSP_3565 660348 - 661139 + | glycoside hydrolase family protein TERM 257 661117 - 661142 + T 71 -11.1 -3.58343 | gap 1 CCCGCTGGGCCGCCT GGCTC-GCGCTG AAC CTGCGCTGAGCC TTTCACGCTGGTGCA RSP_3566 663764 - 661269 - | dimethylglycine dehydrogenase znuB 664781 - 663999 - | ABC zinc tranporter, inner membrane subunit ZnuB znuC 665505 - 664774 - | ABC zinc transporter, ATPase subunit ZnuC zur 666005 - 665502 - | Zinc-uptake regulator, Zur znuA 666062 - 667099 + | ABC zinc transporter, periplasmic binding protein ZnuA TERM 258 667708 - 667660 - g 86 -20.4 -2.71681 | gap 1, overlap 667662 GAACCTCGCCAACCA CAGCTACTGGACCCTCGATCCCG AGCC CGGGATCGGCGG-CCAGCAGCTG CAGATCGCGGCGGAG TERM 259 667706 - 667662 - g 77 -17.2 -2.90194 | gap 1, overlap 667660 ACCTCGCCAACCACA GCTACTGGACCCTCGATCCCG AGCC CGGGATCGGCGG-CCAGCAGC TGCAGATCGCGGCGG galM 667148 - 668131 + | putative aldose 1-epimerase protein gvpA 668346 - 668558 + | gas vesicle synthesis protein GvpA hutH 670138 - 668567 - | histidine ammonia-lyase TERM 260 669340 - 669365 + g 72 -13.3 -3.48924 | gap 1 CGCTGCCGTCCACGC GGGCG-CGCAGC CTC GCTGCGGCGTCC TTCTGTCCGGGATGC gvpK 670534 - 670202 - | putative gas vesicle synthesis protein RSP_6183 671157 - 670531 - | hypothetical protein RSP_6233 672048 - 671350 - | gas vesicle operon protein TERM 261 671830 - 671812 - G 70 -10.2 -3.84648 | GGCAATACCAGTAAA GGCCGCCC CGA GAGCGACC GGGAGGACATCCTCG TERM 262 672060 - 672033 - G 70 -13.4 -3.3197 | opp_overlap 672043, overlap 672036 AGACCACTCCCAGAA GAAGGAGGCCGC TCAT GCGGCGTCCTCC AGATCGGAGGGCACG TERM 263 672057 - 672036 - G 76 -11.5 -3.79906 | opp_overlap 672043, overlap 672033 CCACTCCCAGAAGAA GGAGGCCGC TCAT GCGGCGTCC TCCAGATCGGAGGGC RSP_3576 672920 - 672045 - | hypothetical protein gvpG 673407 - 673174 - | putative gas vesicle synthesis protein gvpF2 674171 - 673407 - | putative gas vesicle synthesis protein RSP_3579 674701 - 674168 - | heat shock protein Hsp20 TERM 264 674672 - 674684 + g 73 -10.5 -3.8512 | overlap 674675 GTCAGCGGTCGTCCT GCCGG GGC CCGGC TTCTTCTCGTCGCTC gvpJ 675017 - 674703 - | gas vesicle protein GVPa RSP_3581 675325 - 675014 - | hypothetical protein RSP_6184 675563 - 675339 - | hypothetical protein gvpN 676510 - 675560 - | ATPase RSP_3583 677838 - 676618 - | class I monoheme cytochrome c TERM 265 677959 - 677913 - H 70 -15.7 -2.7728 | gap 1 CGGAAAGTGCAATCA CTCCGGCGGGGGCGGCCGCGGC CTTC GCCGCC-CTGCCCTCTCCGGAG AAACCCGAAGCCCGG RSP_3584 678040 - 678414 + | hypothetical protein RSP_3585 679733 - 678504 - | tryptophan synthase subunit beta RSP_3586 680194 - 679748 - | putative aromatic pathway regulator RSP_3587 680829 - 680191 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 266 680399 - 680427 + g 80 -10.1 -4.19817 | opp_overlap 680389 AAGGAGAGGCCATTG CCGCCGGGCAGCG CCG CGCCCTTCGGCGG TTTTGCATCGATCAG TERM 267 680773 - 680752 - G 70 -15.1 -2.93858 | CACCAGACCGACATA GGCCGCGCC CGAG GACGCGGCC GCCTTCACATCCGAC RSP_3588 681227 - 680829 - | hypothetical protein ihfB 681531 - 681250 - | integration host factor subunit beta TERM 268 681605 - 681591 - R 79 -2.8 -4.85129 | overlap 681593 AGGATAGAGGAAAAA TCTGCG CCG CACAAA CTGGAAAACCGTGGA TERM 269 681688 - 681654 - R 93 -16.5 -3.86346 | gap 1, opp_overlap 681654 681655 681685, overlap 681661 GGATGGGCGGAGAAA TGCGAAAGGCCCCGCG CAGC CGCGGGGCCCTCCG-A TCGTCTCTGAGGCGA TERM 270 681682 - 681661 - R 95 -18.7 -3.74347 | opp_overlap 681655 681654, overlap 681654 CGGAGAAATGCGAAA GGCCCCGCG CAGC CGCGGGGCC CTCCGATCGTCTCTG rpsA 683391 - 681706 - | 30S ribosomal protein S1 TERM 271 682389 - 682432 + g 86 -14.6 -3.99374 | gap 1 TTTCCAGCACCATGA CGTCCACCTCCTGCGAGGTCG AGA CGATCTTGCCGG-GGTGCACG TTCTTCTTGGTCCAG TERM 272 682546 - 682560 + g 74 -4.2 -4.57073 | GCCCTTGTGGACCGA GCCGAT CGG ATAGGC TTTTTCCACCGCATC TERM 273 683425 - 683448 + r 73 -7.3 -4.13767 | overlap 683427 CACGTCATTTCACGG GCCTGGCGG TTGGCT CCGCCGGTC TTTTCGCATCGCGGC RSP_3591 684119 - 683499 - | cytidylate kinase aroA 685528 - 684191 - | 3-phosphoshikimate 1-carboxyvinyltransferase trmB 686470 - 685745 - | tRNA (guanine-N(7))-methyltransferase TERM 274 686614 - 686646 + H 83 -8.4 -4.65895 | gap 1, overlap 686614 TGACTTGAGGGAGAT CCGGGGGC-GCTGTT ATCC GATAGCAGCCCCGGG TTTTTGCCTGACACG RSP_3594 686736 - 687272 + | antifreeze protein, type I TERM 275 687318 - 687346 + T 100 -20.3 -4.60797 | opp_overlap 687319 687322, overlap 687319 GAGTTTCAGAACGAC AGAAGCCCCGGCG ATC CGCCGGGGCTTCA TTTTGTCTGTCAGAG TERM 276 687345 - 687319 - T 100 -23.8 -2.96452 | opp_overlap 687318 687319, overlap 687322 AGTTTCAGAACGACA GAAGCCCCGGCG ATC CGCCGGGGCTTC ATTTTGTCTGTCAGA TERM 277 687319 - 687345 + T 100 -23.8 -3.35996 | opp_overlap 687319 687322, overlap 687318 AGTTTCAGAACGACA GAAGCCCCGGCG ATC CGCCGGGGCTTC ATTTTGTCTGTCAGA TERM 278 687342 - 687322 - T 100 -19.7 -3.62644 | opp_overlap 687319 687318, overlap 687319 TTCAGAACGACAGAA GCCCCGGCG ATC CGCCGGGGC TTCATTTTGTCTGTC metK 688568 - 687402 - | S-adenosylmethionine synthetase lnt 690144 - 688657 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase RSP_3597 691258 - 690311 - | CorC/Hlyc family protein RSP_3598 691801 - 691298 - | hypothetical protein RSP_3599 692825 - 691785 - | hypothetical protein miaB 694278 - 692968 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 279 694380 - 694361 - R 77 -11.4 -3.89346 | CTCCGAGCCGAGAAA CCGGCCTC CCGC AAGGCCGG CGGCGTCAGCGCGCC RSP_3601 695066 - 694440 - | GDSL family lipase RSP_3602 695125 - 695814 + | ABC efflux transporter, ATPase subunit TERM 280 697012 - 697046 + G 74 -9.3 -4.07568 | overlap 697036 TCGCCGCCATCGGCG GGCTGACGGCGCT-CCT CGT GGGCGGCGCCGT-GGCC TTTTCCGGCACGGCG TERM 281 697704 - 697726 + G 73 -9.8 -3.96148 | opp_overlap 697678 697705 697708, overlap 697705 GACATCGAGGCAGAG ATCACCTCGC TGC GCGAGGTGGA TTTCTCCTCGGCCGG RSP_3603 695811 - 698318 + | eflux ABC transporter inner membrane protein TERM 282 698510 - 698478 - g 75 -10.5 -3.95435 | gap 1, overlap 698473 GCGGCGAAAATACAA GCGC-GGCGGCACC AACGTG GGCGTCGCCCGCGC GCGCGACCTGAAGGG RSP_6185 698320 - 698736 + | hypothetical protein TERM 283 699838 - 699875 + G 79 -16.3 -3.29144 | gap 1 CGCCTATCGCGATCT GGTCGAGGACGGCCCGCG GCT CGCCG-CCGTCATCGACC TTCTGCGCCCCGTCC RSP_3604 699059 - 700111 + | tRNA 2-selenouridine synthase RSP_3605 700112 - 701212 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RSP_3606 701300 - 702598 + | Sigma54-2 (RNA polymerase sigma-54 factor) TERM 284 704671 - 704690 + G 85 -9.2 -4.66833 | CGCCACCGGCCGCCC CCGGATCG CCCG CGACCCGG TTTTTGCGCTTGACG RSP_3607 702698 - 704725 + | hypothetical protein RSP_3608 706394 - 704775 - | hypothetical protein RSP_3609 708368 - 706548 - | ParB family protein RSP_3610 708887 - 708492 - | hypothetical protein RSP_6186 709219 - 708887 - | hypothetical protein RSP_6187 709413 - 709216 - | hypothetical protein TERM 285 709495 - 709447 - H 81 -19 -2.80816 | opp_overlap 709458, overlap 709458 GGTGGACGGAGCATA CCGGGGACAAATATCCCCGTCA ACGGG CGTCAGGGATATTTGTCCCCGC CAAATCGTCCGCCTT TERM 286 710465 - 710430 - H 72 -8.8 -4.04806 | overlap 710433 GTCGATAGCAAACAA GCAGGGAGCGGCGTGA TGTA TCCCGCTGCCCCCCTC GCCCTTCATCAAATC RSP_6188 710445 - 710783 + | hypothetical protein TERM 287 711091 - 711116 + G 93 -13.9 -4.18018 | opp_overlap 711081, overlap 711092 CAGGACGCGGCCACT TCGCCGGGGGC TGCG GCCTCCGGCGC TTTTCGATCGAACGG TERM 288 711092 - 711115 + G 79 -17.4 -3.10597 | opp_overlap 711081, overlap 711091 AGGACGCGGCCACTT CGCCGGGGGC TGCG GCCTCCGGCG CTTTTCGATCGAACG RSP_3611 710917 - 711600 + | hypothetical protein RSP_3612 711607 - 712296 + | hypothetical protein TERM 289 712434 - 712416 - f 72 -4.5 -4.43859 | overlap 712419 CAGAACCTGACAAAA CATCCCT TCTGC AGGGGTG AGAAGATCGGGCGGT RSP_6189 712490 - 713062 + | hypothetical protein RSP_6190 713187 - 713807 + | hypothetical protein TERM 290 717715 - 717742 + G 71 -6.2 -4.18934 | gap 1 AGACGATGGCGACCA TG-CAGCGGATGC GGC GCTTCCGCGGACA TTTCTTCAACTGGTA RSP_3613 714525 - 722834 + | glycosyltransferase RSP_3614 723301 - 722951 - | hypothetical protein TERM 291 723017 - 723035 + g 73 -16 -2.87564 | ATCGTTCAGCCAGGT CGAGGCGC AGA GCGCCTCG TGTATCGCGACATCC groEL 725572 - 723944 - | chaperonin Cpn60 RSP_6255 727054 - 727353 + | hypothetical protein RSP_3616 728302 - 727571 - | Crp/FNR family transcriptional regulator RSP_6191 728480 - 728719 + | hypothetical protein TERM 292 728789 - 728819 + F 100 -21.2 -4.2558 | GCGTGTTGAACGGCA GGGCTGGCGCATCG TCA CGATGGGCCAGCCC TTTTCCTGCGACATC TERM 293 729006 - 729022 + F 71 -10.1 -3.69094 | overlap 729007 ATCCCACCCACTCCT CGGACTG AGG CGGTCCG TTTCGATCCTGCATT RSP_3617 729879 - 730190 + | hypothetical protein RSP_6192 730303 - 730713 + | hypothetical protein RSP_3618 730755 - 731096 + | hypothetical protein TERM 294 731334 - 731367 + F 71 -10.9 -3.56568 | gap 1, overlap 731337 GCTCAGCCCATAGCC GCCGCTCGATCCCGCC TGA GGCGGGGTCGCG-GCC TTTAAGAGCTGGTTC TERM 295 732020 - 732043 + G 70 -4.6 -4.36914 | gap 1, overlap 732021 CCCGCAAAGCACGCG TGCGATC-CAG AAA CTGCGATTGCG TTTTATCGAAAGCCG RSP_3619 731464 - 732306 + | hypothetical protein RSP_3620 732607 - 732401 - | cold-shock DNA-binding protein TERM 296 732588 - 732613 + g 74 -4.7 -4.54727 | gap 1, overlap 732589 GTGGCGTTGAACCAT TTCACGGT-GCC ATT GGCCATCGTGAC TTTTCCTTTCAAGGG TERM 297 733122 - 733138 + H 91 -2.1 -5.40072 | overlap 733121 ACGCGCCCATGACCC GCACTCT TTC AGTGAGC TTTTTTTCCACCACG RSP_3621 733277 - 733510 + | cold-shock DNA-binding protein TERM 298 733534 - 733557 + F 77 -11 -3.90112 | gap 1, opp_overlap 733534 TGCTGAGACCGGAAA GCGGGGCGGCT TGA AGCTGCCC-GC TTTCATTCGAACCGC TERM 299 733566 - 733597 + G 85 -17.4 -3.51934 | gap 1, overlap 733569 TGCCCGCTTTCATTC GAACCGCAGCGGCCT CTC AGGCTGC-GCGGTTC TCTTTATCCGAAAGA TERM 300 733569 - 733594 + G 81 -13.3 -3.89695 | gap 1, overlap 733566 CCGCTTTCATTCGAA CCGCAGCGGCCT CTC AGGCTGC-GCGG TTCTCTTTATCCGAA RSP_3622 733544 - 733894 + | hypothetical protein TERM 301 734536 - 734496 - T 74 -14.6 -3.05384 | gap 1, overlap 734473 CCGCCGTGGAGCCAA GGC-GGCCGCGGGCTGACG GTGG CGAGAGCCCGCGGCCTGAC CAGACGAAGCCGTTA TERM 302 734634 - 734679 + T 82 -11.7 -4.12942 | overlap 734673 734676 GGCAGAACGTTGTGC GTGGGGCCGCAAGATCTCCGC TCCC GCCAGCATCCTGCGGCCCCGC TTTTCGCGGCTTTAG RSP_3623 736232 - 735111 - | putative integrase TERM 303 735137 - 735155 + g 74 -10.2 -4.13945 | opp_overlap 735122 735121 CGCCGCCCTCTGGTC CGCGCCGT TTT ACAGCGCG TTTTACAGTGGGCGT RSP_6193 736513 - 737160 + | hypothetical protein RSP_3624 737964 - 737248 - | hypothetical protein TERM 304 740730 - 740688 - g 73 -9.6 -3.90112 | CCGGGCCGAAGGAAA GCCCGCTCCTTGCCGCCGCG CGC CGCACCGCCGAAGCGCAGGC CGCCAGCCGCCGGGC RSP_3627 739403 - 740749 + | serine peptidase RSP_3628 740758 - 741069 + | hypothetical protein RSP_6194 741066 - 741485 + | hypothetical protein RSP_3629 741697 - 742512 + | hypothetical protein RSP_3630 742534 - 742836 + | hypothetical protein RSP_3631 742840 - 743166 + | hypothetical protein TERM 305 743262 - 743238 - f 72 -15 -2.83715 | gap 1, overlap 743241 CCGATCATCATGACA GGACCCGGCCG CTCC CGGCCGGG-CC GACATACGCGCATGG TERM 306 743260 - 743241 - f 73 -16.4 -2.67694 | overlap 743238 ATCATCATGACAGGA CCCGGCCG CTCC CGGCCGGG CCGACATACGCGCAT RSP_3632 743300 - 743617 + | hypothetical protein TERM 307 743679 - 743715 + T 71 -11.5 -3.63515 | GCACGATCAGGATGC GAGCGCCTTCCGCAGCG CCT CGTTCACGAAGGCGCTC TTGTTCGGCATCCCG RSP_6195 743891 - 743670 - | hypothetical protein RSP_3634 744174 - 743884 - | hypothetical protein TERM 308 744235 - 744212 - H 75 -9.4 -4.18018 | overlap 744213 GGTGTGTAGTCAAAA GCGGTCGCGC GACA GCGCGGCCGT AGCGCCTCTCAGGCA RSP_3635 744384 - 745190 + | putative adenine-specific DNA methyltransferase TERM 309 745217 - 745236 + F 86 -12.1 -4.2349 | opp_overlap 745212 AGTCCAACCACCCAC GCCCCGC CCTCGC GCGGGGC TTTTGCATATGGAGA RSP_3636 745245 - 746054 + | hypothetical protein RSP_3637 746067 - 746573 + | hypothetical protein RSP_3638 747541 - 747125 - | hypothetical protein RSP_3639 747545 - 748048 + | hypothetical protein RSP_3640 748513 - 748890 + | hypothetical protein TERM 310 749566 - 749551 - g 75 -10.4 -3.90328 | overlap 749560 TAGAATCCGGAGAAA GCTGGG AAAT CCCAGC CACACTGGCTAGAAC RSP_3641 748893 - 750221 + | pfkB family carbohydrate kinase exsB 750218 - 750841 + | putative ExsB RSP_3643 750838 - 751503 + | hypothetical protein RSP_3644 753184 - 751763 - | metal dependent phosphohydrolase TERM 311 752887 - 752923 + g 76 -3.7 -4.61231 | gap 2, opp_overlap 752881 752878 GGACAAGACCTGCCG CTGCGCAGAGTCGGCTG TCGAT CCGCCGAC-CTCC-CAG TTTTTCCGCATATAC TERM 312 753228 - 753250 + r 86 -4.1 -5.18297 | gap 1, overlap 753207 753211 GCCGAGCTGTTCAGC GCGCGCTCTT GCTG AAGTGC-CGC TTTTCTTTCTTCTTG RSP_3645 754851 - 753448 - | hypothetical protein RSP_3646 755853 - 755275 - | DNA topology modulation kinase FlaR, putative RSP_6196 757039 - 756665 - | hypothetical protein RSP_3647 758089 - 757562 - | hypothetical protein TERM 313 759719 - 759772 + H 85 -15.9 -3.61398 | opp_overlap 759715 TGGGCGAAGCAGGTC GAGGACCAGCTGGCGCTCGGCGT GCTGACCG AGGCCGAGCGCCGGGCGGGCCTC TTCTTCCGCCACGAC RSP_3650 759964 - 760881 + | periplasmic serine protease (ClpP class) RSP_3651 761316 - 760909 - | hypothetical protein RSP_3652 761473 - 762654 + | phage phi-C31 gp36 major capsid-like protein RSP_3653 762591 - 762956 + | hypothetical protein RSP_3655 764668 - 763763 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 314 764783 - 764727 - R 85 -16.6 -3.59979 | gap 2 CGCGGCCATGCGAAA CGGGCTGCCTG-CCC-GAAGGCGCTGCC GGC GACAGCGCCTTCGGGGCCAAGCGGCAGG GGCTCAGGCCAGATC RSP_3656 766313 - 764787 - | NAD-dependent aldehyde dehydrogenase RSP_3657 767011 - 766355 - | putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase hpcH 767808 - 767008 - | putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase RSP_3659 768647 - 767805 - | amidohydrolase RSP_3661 769694 - 768699 - | TRAP-T family transporter periplasmic binding protein RSP_3662 771042 - 769762 - | TRAP-T family transporter large inner membrane subunit RSP_3663 771593 - 771039 - | TRAP-T family transporter small inner membrane subunit TERM 315 771198 - 771173 - G 74 -2.5 -4.68645 | gap 1, overlap 771174 771195 GATGCAAAAGGAAAA GGCCGCTCATCG CCG CGAAGAA-GACC CCGGCCGCATAGAGC RSP_3664 772547 - 771798 - | GntR family transcriptional regulator RSP_6197 772807 - 773217 + | hypothetical protein RSP_3665 774155 - 773439 - | LuxR family transcriptional regulator RSP_3666 774413 - 779026 + | hypothetical protein TERM 316 783869 - 783838 - g 70 -13.6 -3.24924 | overlap 783836 GCGTCATCGAGAACA CGGCCCGGGCCACG GGCG CGTATCGCGGGCCG GATGGCGAACCGGGC RSP_3667 779082 - 785318 + | parallel beta-helix repeat-containing transcriptional regulator AraC RSP_3669 785323 - 788850 + | hypothetical protein RSP_3670 790167 - 789169 - | putative oxidoreductase myo-inositol 2-dehydrogenase TERM 317 790045 - 790012 - G 73 -13.8 -3.33261 | gap 1, overlap 789993 CTCGAAGTCCGAGAA GACGGCCTTCGCGCC GAACT GGCGCGC-GGCCGCC TGCGCGGCCGCCGCG RSP_3671 791054 - 790167 - | putative D-tagatose 3-epimerase RSP_3672 791941 - 791108 - | ABC sugar transporter, inner membrane subunit RSP_3673 792867 - 791941 - | ABC sugar transporter, inner membrane subunit TERM 318 792990 - 792959 - R 74 -12.8 -3.61517 | opp_overlap 792951, overlap 792960 ATGGTTCGGGAAGAA GGCGGGCCGGGGAG GGAG CGCCCCGGCCCTGC ACCGTCACTCTTCGG TERM 319 792990 - 792960 - R 74 -16.1 -2.76696 | gap 1, opp_overlap 792951, overlap 792959 TGGTTCGGGAAGAAG GC-GGGCCGGGGAG GGAG CGCCCCGGCCCTGC ACCGTCACTCTTCGG RSP_3674 794209 - 792995 - | ABC sugar transporter, periplasmic binding protein TERM 320 794259 - 794235 - R 72 -9.1 -4.06179 | overlap 794236 CCCAAAATCGAGAAA CGTTCGCCGCC CGG GGCGGCGGTCA GGTGAGCGCCCGGAA RSP_3675 795174 - 794257 - | esterase/lipase/thioesterase TERM 321 794425 - 794407 - G 79 -16 -3.28924 | GAGCCGCGCCGAGAA GCGCTCGG CGT CCGAGCGC AGGGGATCGATCTCG RSP_3676 795896 - 795171 - | GntR family transcriptional regulator RSP_3677 796023 - 797102 + | ABC sugar transporter, ATPase subunit TERM 322 797108 - 797135 + F 79 -15.5 -3.31322 | overlap 797109 CATCGCCTGACGATC CCGGCGCGCGG CTCCCC CCGCGCGCCGC TTCTGGCCGCTTGGA TERM 323 797109 - 797134 + F 79 -19 -2.58579 | overlap 797108 ATCGCCTGACGATCC CGGCGCGCGG CTCCCC CCGCGCGCCG CTTCTGGCCGCTTGG TERM 324 797683 - 797667 - f 78 -9.3 -4.30576 | overlap 797669 CTGCCAGCAGGAAAA GCGGGCC CTC GGACCGC GCCGAGCGCCGAGGA RSP_3678 797835 - 798872 + | siderophore-interacting protein RSP_3679 800353 - 799187 - | hypothetical protein TERM 325 800018 - 800006 - G 74 -7.7 -4.30719 | overlap 800008 800009 GCTTTCCAGAAGAAA GATCG CGG CGATC CCCGACCGGTCGCGC RSP_3680 801214 - 800591 - | TetR family transcriptional regulator stcD2 801322 - 803388 + | putative NADH-dependent oxidase RSP_3682 803706 - 803449 - | hypothetical protein TERM 326 803573 - 803517 - G 71 -6.4 -4.26076 | gap 2 GCAGCGTGAGGAAAA GCGCAATCCA-GAGCCCGCC-CATGGCC GTC GGCCGCGAAGCCGGCGCATGGATGCCGC GGACCACGCCCGACC RSP_3683 803814 - 804800 + | FemAB family protein solR 805374 - 806054 + | LuxR family transcriptional regulator RSP_6198 806157 - 806603 + | hypothetical protein TERM 327 806792 - 806823 + F 72 -14.5 -2.91264 | overlap 806795 CCGGACTGCTAGGAT GGACACCGGTCTC GGAACG GAGGCCGGTGTTC TGTATGGGTAAGCGG TERM 328 806795 - 806820 + F 74 -12.6 -3.60525 | overlap 806792 GACTGCTAGGATGGA CACCGGTCTC GGAACG GAGGCCGGTG TTCTGTATGGGTAAG RSP_6199 806840 - 807211 + | hypothetical protein RSP_3686 807600 - 808640 + | LacI family transcription regulator RSP_3687 808643 - 809575 + | ABC sugar transporter, periplasmic binding protein TERM 329 809624 - 809602 - g 86 -19.2 -3.16564 | TCCGCACCCGAGGAA GAGAGGGGGG TAC CCCCCCTCTC CGCAGCCCCGATCCT RSP_3688 809572 - 810357 + | ABC sugar transporter, ATPase subunit yphD 810357 - 811361 + | ABC sugar transporter, inner membrane subunit RSP_3690 811358 - 812422 + | resiniferatoxin-binding, phosphotriesterase-related protein RSP_3691 812445 - 813209 + | putative cytoplasmic protein RSP_3692 814217 - 813339 - | carbohydrate kinase, PfkB/ribokinase RSP_3693 814250 - 815092 + | BtpA protein RSP_3694 815085 - 815750 + | putative transcription activator argE 816814 - 815720 - | acetylornithine deacetylase cysA 817184 - 818299 + | ABC sulfate/thiosulfate transporter, ATPase subunit CysA cysP 818296 - 819288 + | ABC sulfate/thiosulfate transporter, periplasmic binding protein CysP TERM 330 819644 - 819674 + G 71 -16.1 -2.62396 | overlap 819646 819647 CGCGGTCGCCGGCCT GTCGCTCTCGGCG CTTTT CGCCGCGAGCGGC TGGTATGGCGCGATC cysT 819285 - 820142 + | ABC sulfate/thiosulfate transporter, inner membrane subunit CysT cysW 820139 - 820978 + | ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3700 822081 - 821068 - | LacI family transcription regulator TERM 331 821343 - 821311 - G 70 -14.2 -3.21912 | gap 2, opp_overlap 821308 821307 GGTGGAATTGACGAA GAGGCCGCGCGGCAGG TCG CCCGCC-CGCG-CCTC GAGCGCGGCCTCGGC RSP_3701 822302 - 823351 + | ABC sugar transporter, periplasmic binding protein RSP_3702 823410 - 824207 + | ABC sugar transporter, ATPase subunit RSP_3703 824204 - 825451 + | ABC sugar transporter, inner membrane subunit RSP_3704 825464 - 826192 + | ribitol 2-dehydrogenase RSP_3705 826266 - 827900 + | D-ribulokinase TERM 332 827949 - 827929 - T 74 -15.4 -3.04461 | opp_overlap 827944 827945 GATGGAGGCGGAAGA GCGGGGGC TTCGC GCCCCCGC GCCCCCGCGGGATAT RSP_3706 828519 - 827992 - | hypothetical protein RSP_3707 828826 - 830517 + | hypothetical protein TERM 333 830548 - 830511 - T 70 -12 -3.35679 | gap 2, overlap 830514 GGTGCCGACGGAGAA GGACTGACCGGCCGCCCC GCAG GGGACGGCCGGTC-G-CA GGATCAGCGGCCCTG TERM 334 830546 - 830514 - T 82 -19.2 -2.8474 | gap 1, overlap 830511 GCCGACGGAGAAGGA CTGACCGGCCGCCCC GCAG GGGACGGCCGGTC-G CAGGATCAGCGGCCC mcpJ 832213 - 830552 - | methyl accepting chemotaxis protein RSP_3710 832921 - 832475 - | putative monovalent cation/H+ antiporter subunit G TERM 335 832770 - 832732 - G 87 -20.2 -3.06492 | GCATCCAGCTGAAGA GCAGGATCGCCGCGAGGA TGA TCCCCGCGGCGCCCCAGC TCGTGCCGAGGGTGG RSP_3711 833199 - 832918 - | putative monovalent cation/H+ antiporter subunit F RSP_3712 833684 - 833196 - | putative monovalent cation/H+ antiporter subunit E RSP_3713 835303 - 833681 - | putative monovalent cation/H+ antiporter subunit D RSP_3714 835644 - 835300 - | putative monovalent cation/H+ antiporter subunit C RSP_3715 838538 - 835644 - | putative monovalent cation/H+ antiporter subunit A selD 838858 - 839913 + | selenophosphate synthetase RSP_3717 840422 - 839985 - | hypothetical protein RSP_3718 841885 - 840434 - | hypothetical protein RSP_3719 842210 - 843724 + | capsular polysaccharide synthesis protein RSP_3720 843736 - 844689 + | hypothetical protein TERM 336 844714 - 844698 - f 86 -2.1 -5.14965 | overlap 844699 844700 ACGGTGATGAAAAAA GCGCCGC TCT GCAGCAT GAACCGGAGAAGACC RSP_3721 845126 - 846277 + | hypothetical protein RSP_3722 847394 - 846444 - | hypothetical protein RSP_3723 848645 - 847491 - | hypothetical protein RSP_3724 849898 - 848822 - | periplasmic sensor signal transduction histidine kinase RSP_3725 851891 - 850182 - | hypothetical protein RSP_3727 854182 - 851888 - | hypothetical protein TERM 337 854209 - 854190 - R 100 -16.4 -5.14563 | opp_overlap 854178 CGGCCCATGAAAAAA CCGCGCCC GAGG GGGCGCGG TCTGCATCGTCGGTC RSP_3728 854826 - 854236 - | putative acyl carrier protein phosphodiesterase TERM 338 855066 - 855084 + H 73 -13.1 -3.53012 | CTGGCCACGTCGCCC GGCCCCG CGCAC CGGGGCC TTTCGGCAAGACCGG RSP_3729 855137 - 855694 + | hypothetical protein TERM 339 855981 - 855967 - g 70 -12.8 -3.36273 | CTTCGCCAACATCAA CCGGCC CAC GGCCGG GGCCACGCATGAGCG RSP_3730 855887 - 856768 + | putative glutathione S-transferase YghU TERM 340 856785 - 856747 - T 73 -12.3 -3.4252 | CCGGACGCAGGACAA GCTGGAAGGCAGCGCAG GCTGA CTGCGCCGCCCCTCCGC GGGTCGACCGACCGC RSP_3731 857575 - 856811 - | DeoR family transcriptional regulator RSP_3732 857694 - 858740 + | ABC sugar transporter, periplasmic binding protein TERM 341 858767 - 858792 + F 70 -14.7 -2.74525 | overlap 858771 TGACCGGATCCGTCG CGAAGGGGCCC GCCG GGGCCCCTTCC TCCTCTCTCCTTTCC TERM 342 858771 - 858788 + F 74 -14.1 -3.26813 | overlap 858767 CGGATCCGTCGCGAA GGGGCCC GCCG GGGCCCC TTCCTCCTCTCTCCT RSP_3733 858822 - 860315 + | sugar ABC transporter ATPase RSP_3734 860324 - 861301 + | ABC sugar transporter, inner membrane subunit RSP_3735 861314 - 862324 + | ABC sugar transporter, inner membrane subunit RSP_3736 862321 - 863415 + | hypothetical protein RSP_3738 863419 - 864366 + | carbohydrate kinase RSP_3739 864363 - 865337 + | deoxyribose phosphate aldolase TERM 343 865552 - 865591 + G 73 -14.3 -3.31792 | gap 3 CCCCGCGGCGGGTGA GGCCGAGATCGAGGCCGCCG TGG CGGCGGCC-CG--CGCGGCC TTCTCCGGCTGGTCG RSP_3740 865349 - 867724 + | aldehyde dehydrogenase TERM 344 867877 - 867856 - T 100 -18.7 -3.84451 | TGCCGCAAAGCGAAA GGGCCGGCC CGAA GGCCGGCCC TTCCCGACATGGCGG RSP_3742 868692 - 867901 - | ABC amino acid transporter, periplasmic binding protein speB1 869682 - 868720 - | agmatinase RSP_3744 870345 - 869686 - | ABC amino acid transporter, inner membrane subunit RSP_3745 871142 - 870342 - | ABC amino acid transporter, ATPase subunit RSP_3746 871753 - 871139 - | hypothetical protein RSP_3747 872050 - 873228 + | putative dipeptidase ampR 874466 - 873585 - | LysR family transcriptional regulator ampC 874559 - 875701 + | beta-lactamase RSP_3750 876336 - 875974 - | hypothetical protein TERM 345 876265 - 876289 + g 100 -6.4 -5.27335 | gap 1, overlap 876286 CACGATCTTGACTTT GCCCGCACTCA TAGA TGCGT-CGGGC TTTTTCTTTGAAAGC RSP_3751 876809 - 876414 - | hypothetical protein RSP_3752 878074 - 876818 - | hypothetical protein TERM 346 877285 - 877295 + g 74 -2.4 -4.70515 | ACTTCTCATACTTCA CGTC TGC GCCG TTTGTTTTCCCTGTC RSP_3753 878743 - 878405 - | hypothetical protein RSP_3754 878814 - 879776 + | hypothetical protein RSP_3755 881680 - 880247 - | hypothetical protein RSP_3756 882762 - 881677 - | hypothetical protein TERM 347 882240 - 882252 + g 70 -4.7 -4.35116 | overlap 882241 CACCGACAAAGGTGA CCGGG ACG CCCGC TTTTAGTATCAACTC RSP_3757 884347 - 882749 - | hypothetical protein RSP_3759 885807 - 884950 - | putative endonuclease RSP_3758 887131 - 885800 - | cytosine-specific DNA methylase RSP_3762 887611 - 887183 - | T/G mismatch-specific endonuclease RSP_3761 888346 - 887864 - | hypothetical protein RSP_3760 889168 - 888359 - | hypothetical protein TERM 348 889196 - 889177 - R 86 -12.1 -4.2349 | TCTCCATATGCAAAA GCCCCGC GCGAGG GCGGGGC GTGGGTGGTCGGACT RSP_3769 890029 - 889223 - | adenine-specific DNA methyltransferase TERM 349 890325 - 890358 + r 82 -17.5 -3.10715 | CGCTGATGGAGGTTC TGTGCGGGAGCCTCA GGCG TGAGGTTCCCGCACC TTCGCTGCTGGTGCC RSP_3768 890760 - 890398 - | hypothetical protein RSP_3767 891329 - 891012 - | hypothetical protein RSP_3766 891874 - 891548 - | hypothetical protein RSP_3765 892195 - 891878 - | hypothetical protein RSP_3764 893686 - 892202 - | hypothetical protein RSP_3763 894592 - 893702 - | hypothetical protein RSP_3791 899766 - 894592 - | hypothetical protein TERM 350 894967 - 894945 - G 71 -14.8 -3.07043 | opp_overlap 894958 CCGACCAGTCGAACA CCTCCGGCCG GAA CGGCCGCAGG CCAGCGAGGATCGCC TERM 351 897456 - 897416 - G 77 -10.3 -4.14257 | gap 1 CCGAAGAAGGAGAAA GCCGCCGCCA-CCGCGGC AATGGG GCCGAGGATGGCGCCCGC CGCCTGCGCGAAGCC TERM 352 898084 - 898108 + g 73 -13.5 -3.35679 | overlap 898061 898060 CGCGCCTCCGTTGGC GGCCTTCTCGG CCT CCGAGCGGGCC TTCTGCATCGCCCGC RSP_3789 900590 - 900288 - | hypothetical protein RSP_3790 900022 - 900366 + | hypothetical protein TERM 353 900416 - 900428 + gT 75 -10.5 -3.9461 | opp_overlap 900413 TCCGCCGGAGAAGGT CGGCG CCA CGCCG TTCTTCTTCCGACCC TERM 354 900763 - 900731 - TR 86 -19.1 -3.14132 | opp_overlap 900727 900725 CGTGGCCTGCAGGAA GCCCGTCTGACGCGC ATA GAGCGTCAGTCGGGC GAGCCGTTTCCCAGA RSP_3788 901200 - 900754 - | hypothetical protein RSP_3787 901768 - 901298 - | hypothetical protein RSP_6200 902302 - 901880 - | hypothetical protein RSP_3786 902625 - 902299 - | hypothetical protein RSP_3785 903658 - 902636 - | putative bacteriophage-related protein RSP_6201 904129 - 903740 - | hypothetical protein TERM 355 904284 - 904326 + r 91 -15.4 -3.90112 | GCCCGGCGGCTGGCG GCCTGCGCTTCGGCGGTGCG GCG CGCGGCGGCGAGGAGCGGGC TTTCCTTCGGCCCGG RSP_3784 905611 - 904265 - | serine peptidase RSP_3783 907098 - 905608 - | bacteriophage-related protein lambda family phage portal protein RSP_3782 907307 - 907098 - | hypothetical protein RSP_3781 909466 - 907304 - | putative phage terminase large subunit TERM 356 908841 - 908885 + g 73 -13.6 -3.30771 | overlap 908877 CGGATCCGCTGCAGC GC-CATGCCGAAGGGCGAGCCC TCC GGGCT-GTCCTTCGGCCCGAGC TTCTGGGGCATGTGA RSP_3780 910053 - 909466 - | hypothetical protein RSP_3779 910967 - 910251 - | hypothetical protein TERM 357 911014 - 910988 - R 95 -17.3 -3.75153 | gap 1, opp_overlap 910988 CCCCCGGAATGCAAA GCGCCCGCTCGG GTGA CCG-GCGGGCGC TATGGTGGATGATGA TERM 358 910988 - 911014 + r 78 -17.3 -2.81464 | gap 1, opp_overlap 910988 CCCCCGGAATGCAAA GCGCCCGCTCGG GTGA CCG-GCGGGCGC TATGGTGGATGATGA RSP_3778 911544 - 911080 - | hypothetical protein RSP_3777 912498 - 911914 - | hypothetical protein TERM 359 912601 - 912659 + r 84 -16.7 -3.50715 | gap 1, opp_overlap 912612, overlap 912601 GTCTTGTCTTATGCG CCGGACAGAATTCGGCCCGAGGCGGCCG CTTC CGTCCGGTTCTGTCCG-GTTCTGTCCGG TTCTGTCCGCATTCT TERM 360 912601 - 912649 + r 84 -16.8 -3.52906 | gap 1, opp_overlap 912612, overlap 912601 GTCTTGTCTTATGCG CCGGACAGAATTCGGCCCGAGGC GGCC GCTTCCGTCCG-GTTCTGTCCGG TTCTGTCCGGTTCTG RSP_3776 913371 - 912718 - | hypothetical protein RSP_6202 913655 - 913368 - | hypothetical protein RSP_3775 914119 - 913652 - | hypothetical protein RSP_3774 914637 - 914116 - | hypothetical protein TERM 361 914336 - 914316 - G 75 -10.4 -3.96148 | TGGGCCGAGGATAAA GCGTGGCA TGCAC CGCCACGC CCGAGAGGGCGACGG TERM 362 914731 - 914699 - R 72 -6.9 -4.27316 | overlap 914700 GCGCCGAAGGGAAAA GGCCGGGGGCA GAAGGAGCGAG CGCCCCCGGCT GAGTGGCCGCGGCCA RSP_3773 915034 - 914774 - | hypothetical protein RSP_3772 915372 - 915031 - | hypothetical protein TERM 363 915350 - 915389 + g 95 -19.4 -3.71848 | gap 1, overlap 915355 GCGATTTCATGACGG GCGAAGGGGGCGGCGTAGG TCA TC-ACGCTGCCCCCTTTGC TTCTTCCTGAGAGAC TERM 364 915355 - 915384 + g 85 -14.3 -4.09805 | gap 1, overlap 915350 TTCATGACGGGCGAA GGGGGCGGCGTAGG TCA TC-ACGCTGCCCCC TTTGCTTCTTCCTGA RSP_3771 915658 - 916362 + | hypothetical protein RSP_6203 916719 - 916916 + | hypothetical protein RSP_3799 916913 - 917245 + | hypothetical protein TERM 365 917337 - 917304 - g 70 -13.1 -3.40403 | gap 1, overlap 917307 GGCGGCCTACGAGAA GAAGACGGGC-CGCGC CTG GCGCGTGCTCGCCTCC GAGGTTCCCGAGATC TERM 366 917334 - 917307 - g 73 -11.2 -3.84406 | gap 1, overlap 917304 GGCCTACGAGAAGAA GACGGGC-CGCGC CTG GCGCGTGCTCGCC TCCGAGGTTCCCGAG RSP_3798 917248 - 917367 + | hypothetical protein RSP_3797 917427 - 917837 + | hypothetical protein RSP_3796 917856 - 918842 + | hypothetical protein RSP_3795 919486 - 920595 + | hypothetical protein RSP_3794 920826 - 921080 + | hypothetical protein RSP_3793 921229 - 921537 + | hypothetical protein RSP_3792 921843 - 922559 + | hypothetical protein RSP_3805 922803 - 923801 + | integrase RSP_3804 925119 - 924325 - | hypothetical protein RSP_3803 926488 - 925160 - | hypothetical protein RSP_3802 926918 - 926493 - | hypothetical protein RSP_1412 929573 - 926940 - | TRAP dicarboxylate family transporter DctQ subunit TERM 367 927426 - 927410 - G 73 -13.7 -3.42574 | TGAAGGCCACGAGAA GGAGCGC CGC GCGCTCC CACAGCCGCGAGGGC RSP_1413 930626 - 929652 - | TRAP-T family transporter periplasmic binding component RSP_1414 930774 - 931634 + | hypothetical protein RSP_1415 931960 - 932862 + | putative polysaccharide deacetylase RSP_1416 932884 - 933177 + | hypothetical protein RSP_1417 933170 - 934063 + | hypothetical protein RSP_1418 935847 - 934330 - | TRAP-T family transporter large inner membrane subunit RSP_1419 936339 - 935848 - | TRAP-T family transporter small inner membrane subunit RSP_1420 937280 - 936336 - | TRAP-T family transporter periplasmic binding protein RSP_1421 937716 - 937519 - | hypothetical protein TERM 368 937756 - 937766 + r 71 -2.4 -4.66953 | AGCCGGATCTAGGAT CGAG GCG CCCG TTTTTCCAGTATTCC RSP_1422 939228 - 938143 - | ParB-like nuclease RSP_1423 940612 - 939206 - | ParA family ATPase RSP_1425 941208 - 942521 + | plasmid replication initiation protein SEQUENCE gi|125654605|ref|NC_009007.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence (length 114045) TERM 1 535 - 493 - g 70 -12.5 -3.28712 | gap 1 GCGCGGGCCGGAGAA CTCCGCCCCGGCAGGCCTGC CGAT GCGGGCCGGGCGGG-CGGCG GCCAAGGCTCAGGAC RSP_3838 4 - 1839 + | capsule polysaccharide export protein rkpS 1856 - 2677 + | ABC polysaccharide export transporter, ATPase subunit RSP_7084 4091 - 2976 - | ParB-like nuclease TERM 2 4211 - 4201 - R 70 -8.2 -3.90744 | overlap 4202 TCGCGCGCGAAACAA CCGG GGC CCGG GCGCTCACTCCGCGG repA 5670 - 4216 - | ATPase, ParA type TERM 3 6925 - 6912 - g 70 -9.5 -3.85698 | TTTCCGGCTCAGAAA GCCGC TCGA GCGGC GGATCTACGAACTCG RSP_6257 6361 - 7323 + | plasmid replication initiator protein RepA rfbG 7374 - 8312 + | glycosyl transferase family protein rfbC 8376 - 8939 + | dTDP-4-dehydrorhamnose 3,5-epimerase related protein rffG/rfbB 8943 - 9983 + | dTDP-glucose 4,6-dehydratase rmlD/rfbD 9980 - 10831 + | dTDP-4-dehydrorhamnose reductase rmlA/rfbA 10828 - 11718 + | glucose-1-phosphate thymidylyltransferase RSP_3846 12475 - 11693 - | putative deacetylase sulfotransferase RSP_6258 13567 - 12842 - | hypothetical protein RSP_3849 13769 - 14605 + | 2-dehydro-3-deoxyphosphooctonate aldolase RSP_3850 15331 - 14738 - | Generic methyltransferase RSP_7361 16652 - 15354 - | membrane-fusion protein RSP_3852 18823 - 16649 - | ABC export transporter, fused inner membrane and ATPase subunits RSP_3853 20710 - 18938 - | O-linked acetylglucosamine transferase TERM 4 20180 - 20213 + g 75 -14.5 -3.29144 | gap 1, overlap 20183 CTCGGTCAGGCCGGG GACGGCGAGCCGGGCC GGG GGCCAGGC-CGCCATC TTCTGGCGGGCATGG RSP_3854 20963 - 25648 + | ICE nucleation protein TERM 5 25656 - 25691 + T 84 -16.8 -3.53012 | opp_overlap 25655, overlap 25659 25661 25662 TCCTCTGACATAGAG GGAGCACCTCCGGCCC TTCG GGGCCGGAGGATCTTC TTTCCCCGCCCCCGG TERM 6 25659 - 25688 + T 91 -14.9 -3.90744 | opp_overlap 25655, overlap 25656 25661 25662 TCTGACATAGAGGGA GCACCTCCGGCCC TTCG GGGCCGGAGGATC TTCTTTCCCCGCCCC TERM 7 25661 - 25686 + T 85 -16.1 -3.54488 | opp_overlap 25655, overlap 25659 25656 25662 TGACATAGAGGGAGC ACCTCCGGCCC TTCG GGGCCGGAGGA TCTTCTTTCCCCGCC TERM 8 25662 - 25685 + T 83 -19.6 -2.72371 | opp_overlap 25655, overlap 25661 25659 25656 GACATAGAGGGAGCA CCTCCGGCCC TTCG GGGCCGGAGG ATCTTCTTTCCCCGC RSP_3855 28822 - 25733 - | hemolysin-type calcium-binding protein TERM 9 28907 - 28921 + H 77 -3.4 -4.78149 | opp_overlap 28900 28907, overlap 28908 TTTCAAAGCCGAACA GGCCGG GCC TCGGCA TTTTTCCCTTATAAG RSP_3856 29134 - 29772 + | hypothetical protein RSP_7362 30286 - 29777 - | AsnC family transcriptional regulator TERM 10 30068 - 30112 + g 72 -11.4 -3.61398 | opp_overlap 30047, overlap 30069 GAGGCCGAGCCCGAT CCGGGCGGGATCCACCAG-CGC CAC GCGGCCGGTG-ATCACGCCCGA TTGTTCGAGCCGCCG cysA 31134 - 30361 - | sulfate/molybdate ABC transporter ATPase RSP_3859 31967 - 31092 - | sulfate/molybdate ABC transporter inner membrane protein RSP_3860 32804 - 31971 - | sulfate/molybdate ABC transporter inner membrane protein RSP_3861 33810 - 32806 - | sulfate/molybdate ABC transporter periplasmic ligand-binding protein TERM 11 34067 - 34123 + r 73 -12.9 -3.53343 | opp_overlap 34072 34075 TCTTGTCGTGATTTG GAGAAGGATCTTCTCCACCCGGCCG CGCCGGC CGGGCGGCGGGAGAAGGGCCTGCTC TTTCGAGGGGGGATT RSP_3862 35137 - 34238 - | chromosome replication initiation inhibitor protein RSP_3864 35858 - 36484 + | negative transcriptional regulator RSP_3865 37144 - 36635 - | BadM/Rrf2 family transcriptional regulator TERM 12 37197 - 37185 - R 76 -7.7 -4.35483 | opp_overlap 37181 37178 CGGGATCACAAGAAA GATCC ACA GGATC GGTCGTGTTTTCCTG RSP_3866 38068 - 37658 - | hypothetical protein RSP_3867 38226 - 38678 + | carboxymuconolactonedecarboxylase/alkylhydroperoxidase TERM 13 38739 - 38704 - T 78 -16.9 -3.05384 | gap 1, overlap 38706 GCGGCCGGCATTCAA CAGGCCGCCCGAGGGC GGACG GCCCTCGGGCT-CCTG CGGGACGGGCGCCCC TERM 14 38727 - 38706 - T 74 -15.1 -3.08679 | overlap 38704 GGCCGGCATTCAACA GGCCGCCCG AGGG CGGACGGCC CTCGGGCTCCTGCGG RSP_3868 39430 - 38843 - | molybdate ABC transporter inner membrane protein modC 40628 - 39522 - | ABC molybdate transporter, ATPase subunit ModC TERM 15 40374 - 40337 - G 75 -14.2 -3.5393 | ACCAGCGCCCGTAAA GCAGGTTCTGCCGCAC GCTCAG ATGCGGCAGAAGCCGC GCATCCTGAAAGACA modA 42099 - 41323 - | ABC molybdate transporter, periplasmic binding protein ModA TERM 16 42123 - 42156 + r 71 -10.2 -3.68292 | gap 1, overlap 42120 42125 TTTCCGAACCTCTGA CTGTCGGCACGGGCG GTGCG CGCCCG-GCCGAACG TTATGTATTCGAACT RSP_3872 42837 - 42634 - | molybdenum-pterin binding protein modD 44008 - 43175 - | quinolinate phosphoribosyl transferase/putativemolybdenum utilization protein ModD mopB 44836 - 44048 - | transcriptional repressor, ModE RSP_3876 45840 - 46589 + | hypothetical protein RSP_3877 47489 - 46629 - | glycoside hydrolase family protein flaA 47898 - 48743 + | flagellin flaF 48833 - 49198 + | flagellar biosynthesis regulatory protein FlaF flbT 49195 - 49602 + | flagellar biosynthesis repressor FlbT flgF 49599 - 50387 + | flagellar basal-body rod protein FLGF RSP_3882 51698 - 50670 - | ABC di/oligopeptide transporter, ATPase subunit RSP_3883 52714 - 51698 - | ABC di/oligopeptide transporter, ATPase subunit RSP_3884 53939 - 52764 - | mandelate racemase/muconate lactonizing family protein TERM 17 53934 - 53918 - G 74 -2.9 -4.64844 | opp_overlap 53918, overlap 53920 TCGACAGATAGAAAA GGTCGAC GGC ATCGATC TTCATGTCAGCTCCG RSP_3885 55437 - 53941 - | hypothetical protein RSP_3886 56495 - 55455 - | succinylglutamatedesuccinylase/aspartoacylase RSP_3887 56601 - 57782 + | mandelate racemase/muconate lactonizing protein TERM 18 58415 - 58439 + G 75 -10.6 -3.95073 | opp_overlap 58414 CCACATCGACTACAT GCTGTCGCGC ATCCC GCGCGGCCGC TTTCTGGATCTGGAC fabG 57804 - 58550 + | Short-chain dehydrogenase/reductase SDR TERM 19 58709 - 58658 - T 81 -19.2 -2.78463 | gap 1 ACTGGGTCGATGACA TCGCCGGAGCGGCGCCGCGGCCCGC GGG GCGGGC-GCGGCTCCGCGCCCTCGG CCCTGCGGCCTTGCC TERM 20 58816 - 58851 + T 72 -13.2 -3.14132 | gap 1, opp_overlap 58802 58806 ACCGACCACGCCGCC GA-AGCCGGTCCGGCGG TTC CGGCCGGGCCGGCGATC TTCATGAAGGCGACG TERM 21 59038 - 59065 + T 95 -14.9 -4.1891 | gap 1 GGGCTGACGGCGGAA CGGCCCCG-GAG ACATG CTCTCGGGGCCG TTTGTCTTGCAGAAG RSP_3889 59803 - 59093 - | Short-chain dehydrogenase/reductase RSP_3890 60720 - 59815 - | ABC di/oligopeptide transporter, inner membrane subunit RSP_3891 61663 - 60710 - | ABC di/oligopeptide transporter, inner membrane subunit RSP_3892 63300 - 61744 - | ABC di/oligopeptide transporter, periplasmic ligand binding protein TERM 22 63832 - 63865 + G 75 -13.1 -3.59979 | TGAGGCCCGGGTGCG GGAATTGCATGCCGC AGTG GCGGCTGGCGATTCC TTTGGAGTCGCGCGG pdhR 63440 - 64171 + | GntR family transcriptional regulator RSP_3894 64513 - 64938 + | ring hydroxylating dioxygenase, alpha- subunit RSP_7363 66981 - 66691 - | hypothetical protein TERM 23 67488 - 67513 + r 71 -2.5 -4.65916 | gap 1, overlap 67500 CGCACGGTCTGCCAG CTCCTCA-ATGC CTC GCAAGTGCGGAG TTTTCTTCAGATGGG TERM 24 68288 - 68267 - R 78 -15.9 -3.10493 | opp_overlap 68262 CCGCTAATAGACAGA CCTAGCGGC TCAG GCCGCTAGG ATCCCAACTTTTTTT RSP_7364 70225 - 69023 - | putative Mrr restriction system protein RSP_3910 71270 - 70929 - | hypothetical protein TERM 25 71206 - 71180 - G 70 -9.4 -3.77437 | opp_overlap 71183, overlap 71181 71183 71198 ATGAATAATAGAGAA GGACCGCGCT CCAGATC AGCGCGGTCT GTGCCCCGGCCGGCA RSP_3909 71668 - 71267 - | hypothetical protein RSP_3908 72218 - 71661 - | hypothetical protein RSP_3907 72711 - 72220 - | hypothetical protein RSP_3906 73572 - 72751 - | DSBA oxidoreductase TERM 26 75865 - 75834 - g 82 -18.6 -3.16191 | GCAGATGGTCACTAA CCGCCCCCGCGCCC GGGA GGGTGCGGGTGCGG CGGTGGCCGAGGTGC traD 73732 - 76014 + | hypothetical protein TERM 27 79265 - 79242 - g 75 -11 -3.88291 | gap 1 GAGCAGGCGCAGAAA CTGCGGCAGGC GGA GCCC-CCGCAG GAGCGCACTGATCGG traI 76011 - 79346 + | hypothetical protein RSP_3903 79343 - 79975 + | hypothetical protein TERM 28 80053 - 80006 - g 82 -12.6 -4.1585 | overlap 80009 TCAGAAGGCCGAAAA CTACCGTGGCACGTCGTGCCAC GCGC GTGGCACACTGTGCCACGGCCC CGAAAAACAACGTAA TERM 29 80050 - 80009 - g 93 -20.9 -3.09718 | overlap 80006 GAAGGCCGAAAACTA CCGTGGCACGTCGTGCCAC GCGC GTGGCACACTGTGCCACGG CCCCGAAAAACAACG TERM 30 80088 - 80106 + G 71 -8.8 -4.07568 | AGCGCGTTGGGAGCC GGGGGC AAATTAC GCCCCC TTTTAAGACGAAAAG TERM 31 80138 - 80121 - g 78 -8.5 -4.4261 | CTTTTAAGACGAAAA GCCTTTA TTTA TAAAGGC TTGAAGGCAATGGGC RSP_3902 79965 - 80984 + | hypothetical protein virC1 81406 - 82302 + | virC1 gene, ATPase RSP_3899 85592 - 84729 - | hypothetical protein TERM 32 85771 - 85812 + r 76 -7.7 -4.36914 | opp_overlap 85771 85770, overlap 85788 GGTGACGGGGAAAAT TGGGGGGCACCCGCGCGGG CTCG CCCGCGTGGGGGGAGCCGA TTTTCTCCGGCGCCG TERM 33 85934 - 85908 - R 91 -11.5 -4.60487 | gap 1, opp_overlap 85912, overlap 85909 85910 CAGCACCTGCAAAAA GTGTCGCGCCGC TCCC GCGGCGCGTC-C TTGCCAACTCGATCC TERM 34 85912 - 85931 + r 74 -16.4 -2.71731 | opp_overlap 85910 85908 85909 ACCTGCAAAAAGTGT CGCGCCGC TCCC GCGGCGCG TCCTTGCCAACTCGA TERM 35 86200 - 86147 - R 74 -16 -2.80816 | gap 2, overlap 86191 CGCGCAGGGACGAGA GGGCGTCATGGCTCCGGTCCCGGCCG CTTG CGGACGGGACTAGAGCCGTG-C-CCC GGCTACGCCGGGGTC TERM 36 86582 - 86541 - R 95 -14.5 -4.26076 | gap 2, overlap 86542 GCACGTCCACTAAAA GGACGCGGCCCGCTCTGCC CTGGCC GGCAG-GCGGGCCGC-TCG ATCTCGACGCGGGCC TERM 37 86581 - 86542 - R 85 -18 -3.15324 | gap 2, overlap 86541 CACGTCCACTAAAAG GACGCGGCCCGCTCTGCC CTGGCC GGCAG-GCGGGCCGC-TC GATCTCGACGCGGGC TERM 38 87611 - 87600 - R 76 -7.2 -4.36914 | opp_overlap 87610 CGCGCGCTGAGAAAA CGGG ACGG CCCG AGCGTGACCCATGCT repC 89823 - 88561 - | replication protein C TERM 39 88967 - 88992 + g 79 -16.9 -3.13371 | overlap 88966 88964 TTTTTTTCGTAGTAC GATGCCGTGCC GAAC GGCGCGGCATC TGTCTTAATGCAGTC TERM 40 89836 - 89848 + r 87 -9.1 -4.75174 | CATAGCTTCCTTGTT CGCAG AAA CTGCG TTTTTCGCTTGCCTG TERM 41 89930 - 89969 + r 100 -7 -5.40625 | gap 1, overlap 89939 TTGGCTCCCTGGGCT GTAGCATCCCCCCCGCCGG TTA CCGCCGCGCGGGG-GTTAC TTTTTTCTGTAGTGT TERM 42 89939 - 89965 + r 90 -13.7 -4.01646 | gap 1, overlap 89930 TGGGCTGTAGCATCC CCCCCGC-CGGT TACC GCCGCGCGGGGG TTACTTTTTTCTGTA TERM 43 90071 - 90096 + r 72 -13.3 -3.17229 | opp_overlap 90070 90071 90073, overlap 90070 AGCAAAGACCACAAG CACCTGCGCCT AGCA AGGCGTGGGTG TCTTCATAATGAGCT RSP_3936 92606 - 91755 - | H(+)-transporting ATP synthase, subunit gamma atpA 94096 - 92603 - | H+-transporting two-sector ATPase, alpha/beta subunit TERM 44 93473 - 93437 - G 100 -26.7 -3.21099 | GGGCGCCACCACGAA GACCGTGCGCGCGAAGG CCC CCTTCTCGCGCACGGTC TCGATCACCCGGCGG RSP_7012 94790 - 94086 - | H+-transporting two-sector ATPase, B/B' subunit RSP_3933 95727 - 95044 - | F0F1 ATP synthase subunit A RSP_3931 96346 - 95981 - | hypothetical protein TERM 45 96289 - 96342 + g 86 -20.1 -2.71144 | opp_overlap 96275 96274 TGGCGGGCGCGGCCG CGGGATCCGGTCCGGGACCGGCTCC GGGC GGGGCGGATCCCGGGCCGGGGCCGG TCATTCGAAGGCCTC atpC-1 96783 - 96343 - | F0F1 ATP synthase subunit epsilon atpD 98174 - 96780 - | F0F1 ATP synthase subunit beta TERM 46 98366 - 98376 + H 76 -2.4 -4.77036 | opp_overlap 98343 98365, overlap 98365 CCGATGGCAGAGGAT GCGC CCC GCCC TTTTTGCTCCTCCGG TERM 47 99050 - 99006 - H 100 -31.8 -4.07568 | opp_overlap 99019, overlap 99019 GCCGGGGGGCGAAAA GCCGTGGCCAAAATTGGCCA TGGCG TGGCCAATTTTGGCCACGGC TCCAGAAAAGGATTC TERM 48 99037 - 99019 - H 72 -8.9 -4.08064 | opp_overlap 99019, overlap 99006 AAGCCGTGGCCAAAA TTGGCCA TGGCG TGGCCAA TTTTGGCCACGGCTC TERM 49 99019 - 99037 + H 75 -9.6 -4.07885 | opp_overlap 99019 99006 AAGCCGTGGCCAAAA TTGGCCAT GGC GTGGCCAA TTTTGGCCACGGCTC TERM 50 99415 - 99379 - H 100 -25.1 -3.01712 | overlap 99344 CGGTCCTCCTGAAGA TCCCCCGCCTCGCCGCG GCT CGGGGCGAGGCGGGGGC CAGACGAGGCGGAGG RSP_3927 99745 - 100365 + | hypothetical protein TERM 51 100426 - 100376 - f 71 -11.1 -3.55801 | gap 2, overlap 100366 100380 100381 AGTAACGGCCCCAAA GGAAGGGCGGCCGCAGCAGCCTCGG GAT CCGAAGA-GCTGCGGCCTAC-TCCC GGGCGGCGCGGGGCC RSP_3926 100650 - 101654 + | NAD-dependent epimerase/dehydratase TERM 52 102224 - 102214 - g 70 -2.4 -4.57569 | TCAGGTGGCCAAAAA CGGC AGG GCGG GAAGATTTGATCCGT TERM 53 102382 - 102393 + G 72 -5.8 -4.40572 | opp_overlap 102373 CAAACATCCCGAAGG GGTC ATAG GACC TTTTCTCGAGCTTCT TERM 54 102799 - 102784 - g 74 -2.4 -4.63218 | TCTCCCGGAAGAAAA CCTGCG CATG CGCGAG AAACTCAGGGCTGCC RSP_3925 101774 - 102826 + | hypothetical protein RSP_3924 103540 - 102851 - | hypothetical protein RSP_3923 104952 - 103630 - | hypothetical protein TERM 55 104694 - 104706 + g 81 -2.6 -4.91712 | CGGTCAGATAGGTAT CGTC CGGGC GGCG TTTTTCTCCCTTGGC RSP_3922 106009 - 105068 - | hemolysin-type calcium-binding protein RSP_3921 107492 - 106191 - | hypothetical protein TERM 56 106641 - 106672 + g 76 -17.2 -2.79183 | opp_overlap 106628 106629 AAGGCCCGCCTGCAC GCCCGCAGGGCCGC CGCT GCTGCCCTGCGCGC TGTCGTAGCCGTAAA TERM 57 107360 - 107323 - G 72 -15.6 -2.78384 | CCCGGGCCCACCAGA TGCCGCGCC-CCCGCGGC CGGG GCGGCGGGCGGCGCGG-A GCGGTCGCGGTCGAG RSP_3920 108095 - 109453 + | hypothetical protein RSP_3919 110603 - 109611 - | hypothetical protein RSP_3918 112859 - 110604 - | hypothetical protein TERM 58 110854 - 110878 + g 73 -14.9 -3.21276 | overlap 110852 110855 GCGCCGTAGGCCACA TGGCCCGCCGC CCC GCGCCGGGCCG TATTGTCCCAGCCCG TERM 59 110855 - 110877 + g 71 -16.2 -2.52623 | overlap 110854 110852 CGCCGTAGGCCACAT GGCCCGCCGC CCC GCGCCGGGCC GTATTGTCCCAGCCC rkpT1 113723 - 112923 - | ABC polysaccharide export transporter, inner membrane subunit SEQUENCE gi|125654693|ref|NC_009008.1| Rhodobacter sphaeroides 2.4.1 plasmid E, complete sequence (length 37100) TERM 1 504 - 556 + G 76 -16.8 -2.78384 | gap 1 CCTCACCGTGCTGCA GGTCGGGTCGGAGCCGCGGCCCGGG ACGA CCCCGGCCGC-GCCGCGGCCCGGGC TGTCCTGAGCGCCGG rnk 124 - 564 + | nucleoside diphosphate kinase regulator RSP_4255 793 - 1728 + | mechanosensitive (MS) ion channel protein RSP_4257 2065 - 3555 + | antisigma-factor antagonist STAS usp 3569 - 4414 + | universal stress protein RSP_7394 5002 - 4532 - | hypothetical protein mexT 5078 - 6004 + | LysR family transcriptional regulator RSP_7352 6337 - 6831 + | hypothetical protein RSP_7395 7244 - 6828 - | MerR family transcriptional regulator TERM 2 7813 - 7851 + G 89 -22.6 -2.62184 | overlap 7814 TCAGCTACGCCTTCC TGTCGGCGATCACCGACT TGG ATTCGGTGATCGCCGGCA TGGTATCGGGCGGCA RSP_4262 7329 - 8117 + | esterase/lipase/thioesterase TERM 3 8211 - 8240 + F 72 -6.9 -4.25283 | opp_overlap 8200 8210 GAAAGCCCGACACAT CGGCCGACCTCCG ATAG CGGGGTGCGGGCG TTTTCCTGAAGCGCT TERM 4 8368 - 8344 - f 72 -3.6 -4.58283 | gap 1, opp_overlap 8355, overlap 8345 8355 GAAGTGTGCCAAAAA CGCCGATGAAT TGCC ATTC-CCGGCA TGCGTTCGGCAAGGG RSP_4263 8414 - 8959 + | hypothetical protein RSP_4264 8962 - 9594 + | lysine exporter protein LysE/YggA RSP_4265 10361 - 9597 - | AraC family transcriptional regulator TERM 5 10520 - 10533 + G 87 -3.7 -5.15969 | TGTGCAATGCGATCG CGGGC GGCG GCACG TTTTTTACCTTCCCG RSP_4266 10453 - 11193 + | hypothetical protein RSP_7397 14048 - 13176 - | ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit fhuB 15985 - 14048 - | iron-hydroxamate transporter permease subunit TERM 6 14865 - 14825 - G 85 -19.1 -3.09785 | CGAGAGCGCAAGACA GGCGCCTG-CGCCGGCCGC GAGCA GCAGC-GGCGGCAGGCGCC AGCGCAGGACGGCGG fhuD 16852 - 15989 - | ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein fhuA 19270 - 16895 - | TonB-dependent receptor protein fecR 20375 - 19401 - | FecR protein RSP_4275 20869 - 20372 - | sigma24, FecI zitB 22181 - 21204 - | cation efflux protein RSP_4277 22379 - 22801 + | MerR family transcriptional regulator yeaM 23726 - 22926 - | AraC family transcriptional regulator TERM 7 23441 - 23391 - G 89 -10.3 -4.58283 | gap 1, overlap 23380 23379 23392 CAACTCGCGGAAAAA CCGCGACACCGCGATCGTGCAGCA ATCT TTCGGCAGGTTCGCGGAGTCG-GG AGGATCAATGAAAAG TERM 8 23468 - 23456 - G 72 -3.3 -4.46615 | GAGGATCAATGAAAA GAGAG AGA CACTC CACCTCGCCCGAGCC RSP_4279 23883 - 24281 + | hypothetical protein RSP_7398 24311 - 24721 + | hypothetical protein TERM 9 25747 - 25710 - T 75 -8.3 -4.1891 | opp_overlap 25713, overlap 25713 CCTCCGCAAGATAAA GATCCCTGAGGCCGGCG TTAG CATCGGCCTGCAGGATC CCATTGCCGGCCCCG RSP_4284 31097 - 26034 - | YD repeat-containing protein TERM 10 28094 - 28080 - G 72 -11.4 -3.61715 | opp_overlap 28082 CACCTGTTTCAACAA CACGCC GTT GGCGTG GTTGGCCGTGCCCCA TERM 11 30755 - 30708 - G 100 -23.4 -3.21925 | gap 1, overlap 30709 ATAGCGCAGCATGAA CCCGTATGTCCCGCCGCCGCCCG GAA CGGGCTGCGGCGGGACG-ACGGT CTGGAACAGGCGCCC TERM 12 30754 - 30709 - G 95 -26.9 -2.52834 | gap 1, overlap 30708 TAGCGCAGCATGAAC CCGTATGTCCCGCCGCCGCCCG GAA CGGGCTGCGGCGGGACG-ACGG TCTGGAACAGGCGCC RSP_4285 31726 - 31211 - | hypothetical protein RSP_4289 33881 - 33153 - | hypothetical protein TERM 13 33778 - 33757 - G 76 -8.6 -4.26344 | overlap 33743 ACAGCTTGAGCAAAA CTGCCGGG TGATAC CCCGGCCG ACCGGTGCGTGCCGT TERM 14 34608 - 34619 + H 76 -2.2 -4.80453 | overlap 34598 34597 GGGAGGCAATCAGCA TCGT GATT GCGA TTTGTTTTGTGGTCG RSP_7359 34871 - 35359 + | putative transcriptional regulator RSP_7360 35612 - 36631 + | integrase catalytic subunit