TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.345085 %AT, 4139856 nt, 40658 terms. Intergenic: 0.389489 %AT, H2T: 444205 nt, 4664 terms; T2T: 153761 nt, 3538 terms; H2H: 191459 nt, 3959 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|91974482|ref|NC_007958.1| Rhodopseudomonas palustris BisB5, complete genome (length 4892717) TERM 1 977 - 925 - g 80 -14.9 -3.39895 | gap 3, overlap 921 GCGGTGACGAAGGAA GCGCCCG-CGCCGGCCGA-GCATCGC CGCG ACGA-GCACCGTCCGGCGGCGGACGC GCGCAGCCACGCAGC dnaA 649 - 2067 + | chromosomal replication initiation protein TERM 2 2858 - 2833 - g 75 -9 -4.07568 | gap 1, overlap 2834 GCGGGCTCGGCAAAA GCCGCGA-CGC TGCGC GCGGTCGCGAC CGACGGCCATCGCCT RPD_0002 2329 - 3447 + | DNA polymerase III subunit beta TERM 3 4030 - 4050 + G 75 -4.5 -4.66609 | overlap 4031 GGACTGTTCATGGGC GCGGCGTCG GAA CGGCGGCGG TTTTTCGATCGCCTG TERM 4 4661 - 4717 + G 81 -10.8 -4.11394 | GGCTTGGCGCGCAGG TCTGGATGACCGGCGCCGATC-CGGCGG GCT TCGCCGAGATCGGCCCC-GACGCCGAGA TTTTCACCGTCGAGT recF 3622 - 4758 + | recombination protein F TERM 5 5521 - 5536 + G 83 -4.6 -5.08824 | CGCCAATGGCCGGCG CGGCAC CGAG GTGACG TTTTTTGCATCGCCG gyrB 4985 - 7426 + | DNA gyrase subunit B RPD_0005 8461 - 7691 - | hypothetical protein RPD_0006 8738 - 8475 - | hypothetical protein RPD_0007 9092 - 8751 - | hypothetical protein RPD_0008 10505 - 9267 - | divergent AAA region TERM 6 9468 - 9455 - G 74 -8.1 -4.21908 | opp_overlap 9442 CAGCACCAGCGAAAA CGACG TCTG CGTCG ATGTCGGTCGGGGCC RPD_0009 10961 - 11476 + | hypothetical protein RPD_0010 11481 - 12173 + | hypothetical protein RPD_0011 13025 - 12201 - | hypothetical protein RPD_0012 15799 - 13025 - | helicase-like protein RPD_0013 18746 - 15807 - | DNA methylase containing a Zn-ribbon TERM 7 16451 - 16461 + g 72 -6.8 -4.18018 | TTTGAAGATCCGCAT CCTC GAA GAGG TTTTCGATACGGCCG TERM 8 17582 - 17631 + g 74 -7.7 -4.29106 | overlap 17587 TTTCCCAGAGTCGCA GATTGTTCGCCGCGATCCCCCCG GCTT CGCGGCGATCGCCCCGAATCGTC TTTATTGGTGTGGAG RPD_0014 19339 - 18758 - | hypothetical protein TERM 9 19153 - 19183 + g 72 -14 -3.06796 | opp_overlap 19129 GCTCTCTGCGAATCG CGTTCCAGGCTTCC TGC GGAAGCCGGCAACG TTCGATCGAATCCGG RPD_0015 22488 - 19336 - | hypothetical protein TERM 10 19739 - 19769 + g 73 -14 -3.16944 | overlap 19732 AAAACCTTGGTCACC TCTACGCCGGCGTC CTC GGCGTAGGCGTAGA TCTTCACTTCGTCGT TERM 11 21640 - 21625 - G 78 -10.4 -4.11692 | opp_overlap 21625 GATCGAGTCGGAAAA CGCCGT GGAG ACGGCG TTGATGACCTTCTGG TERM 12 22528 - 22550 + r 72 -4 -4.66833 | overlap 22529 ATTCCAAAATCAGCT TGCTTGATGC GCC GCCTCAGGCC TTTTTCGCCTTCGAC RPD_0016 22762 - 22544 - | hypothetical protein RPD_0017 23030 - 23581 + | hypothetical protein RPD_0018 23793 - 24572 + | metallophosphoesterase TERM 13 24866 - 24924 + G 86 -17.6 -3.17051 | gap 2, overlap 24838 24867 24888 CGTCCGCGACGATGG CCGCTTCCATCTCGACGTCGTCGAGGCC CGCCA GGTC-CG-CGACGTCGAGATGGAGGGGC TCTTCCTGATCGCGC TERM 14 24867 - 24923 + G 100 -21.1 -2.50016 | gap 2, overlap 24838 24866 24888 GTCCGCGACGATGGC CGCTTCCATCTCGACGTCGTCGAGGCC CGCCA GGTC-CG-CGACGTCGAGATGGAGGGG CTCTTCCTGATCGCG RPD_0019 24633 - 25244 + | hypothetical protein TERM 15 25923 - 25938 + G 70 -10.4 -3.73953 | opp_overlap 25923 AGGTGGAGGACGACA TCGCCG CCGG CGGCGA TTTCCTGGACCTGCT TERM 16 26335 - 26302 - g 78 -16 -3.14564 | gap 1, opp_overlap 26313 26321 26322 GGATTCGGTGATCAA GGCGTCGCGCGCGGT ATTCG ACCGCGC-CGCCGCC TCGGCGCCGTGCATC RPD_0020 25241 - 27334 + | AAA ATPase, central region TERM 17 27572 - 27587 + G 75 -4.7 -4.58395 | opp_overlap 27560, overlap 27560 GAATCGTCCGGCCGG CATCG CCGAGA CGATG TTTTTGAACCATCCG RPD_0021 27411 - 27716 + | hypothetical protein TERM 18 28241 - 28265 + G 74 -9.9 -3.78775 | overlap 28242 AGCGAATTTTGATCG ACGCCGGGCCT ATG AGGCTTGGCGA TTTGCTCATGCGGGA RPD_0022 27805 - 28395 + | hypothetical protein TERM 19 28424 - 28409 - f 75 -11.8 -3.63991 | GACTACGCGTAAGAA CGCGGC CGCC GCCGCG CGGAAGTCCGATTGC RPD_0023 28823 - 29248 + | hypothetical protein RPD_0024 29308 - 29997 + | hypothetical protein TERM 20 30069 - 30053 - g 82 -6.6 -4.82901 | CCGGCTGCACAAAAA CGATCA AGTAG TGATCG ACGAGGTCTGGTATC RPD_0025 29997 - 32429 + | integrase catalytic subunit RPD_0026 32426 - 33565 + | hypothetical protein TERM 21 33822 - 33850 + G 76 -8.7 -4.25104 | overlap 33815 33831 CGCCAGTGGTCGGTG CATGCCGGCCGCC GCG GATGCCCGGCGTG TTTTGCTGGCGACCG TERM 22 34706 - 34732 + G 88 -10 -4.36914 | GGCACTTGGACGCGG CCAGACCCGGCG TCT CGTCGGCGCTGG TTTTCTCGGCGACCG RPD_0027 33552 - 35345 + | hypothetical protein RPD_0028 35342 - 37240 + | hypothetical protein RPD_0029 37353 - 37691 + | hypothetical protein RPD_0030 38431 - 37697 - | hypothetical protein RPD_0031 38798 - 38412 - | hypothetical protein RPD_0032 38941 - 39660 + | hypothetical protein RPD_0033 39653 - 40090 + | hypothetical protein RPD_0034 40087 - 40557 + | hypothetical protein RPD_0035 40554 - 41921 + | UBA/THIF-type NAD/FAD binding fold TERM 23 42137 - 42087 - f 91 -16.9 -3.29144 | CGATCTCTTGGATAA CCCGCCCATCGGACGCTTCCA TCTCAACTT TGGGAGCGCCTGATGAGCGGG TTGAGGCGATTACTT TERM 24 43133 - 43150 + G 72 -8.3 -4.07568 | CCGACGGCCAGGCGG CCGCCGC GCTG GCGGAGG TTTTGGCGAAAGGCC RPD_0036 42301 - 44961 + | hypothetical protein TERM 25 46881 - 46871 - g 72 -6.8 -4.18018 | CGGCCTGACCGAAAA CGAG CTG CTCG ACATCATGGAGGGTC TERM 26 47991 - 47933 - g 73 -13.1 -3.34398 | gap 2 CGCCTTGCTGAAACA GCACCTGGGCATCGAGC-CGA-CGGCCGA ACC TCAGCCGGTCGAACTCGCAGCCACGGTGC TGAAGACGTTGGCGC RPD_0037 44958 - 48305 + | UvrD/REP helicase RPD_0038 48319 - 49446 + | hypothetical protein RPD_0039 49802 - 49431 - | hypothetical protein TERM 27 49798 - 49841 + g 100 -22 -2.92192 | gap 1, opp_overlap 49802, overlap 49781 49800 49802 ATGCGTTTTTTTGAC GACATCATTCGCTCCTCAAGG CAA CCA-GAGGAGCGAATGATGTC TATCCTTACGTCCCC TERM 28 49800 - 49839 + g 90 -18.8 -3.0127 | gap 1, opp_overlap 49802, overlap 49781 49798 49802 GCGTTTTTTTGACGA CATCATTCGCTCCTCAAGG CAA CCA-GAGGAGCGAATGATG TCTATCCTTACGTCC TERM 29 49837 - 49802 - R 84 -17 -2.78384 | opp_overlap 49781 49800 49798 49802 GTTTTTTTGACGACA TCATTCGCTCCTCAAG GCAA CCAGAGGAGCGAATGA TGTCTATCCTTACGT TERM 30 49802 - 49837 + r 81 -15.6 -3.05914 | gap 1, opp_overlap 49802, overlap 49781 49800 49798 GTTTTTTTGACGACA TCATTCGCTCCTCAAGG CAA CCA-GAGGAGCGAATGA TGTCTATCCTTACGT RPD_0040 51813 - 50548 - | thiolase TERM 31 51610 - 51580 - G 70 -11.1 -3.53224 | gap 1, overlap 51582 GATGCGCTCGGGAAA CAGCCCCTC-CCGC ACCA GCGGAGAGAGGCAG ACCTGTCCGCGAATA TERM 32 51608 - 51582 - G 71 -12.3 -3.34398 | gap 1, overlap 51580 TGCGCTCGGGAAACA GCCCCTC-CCGC ACCA GCGGAGAGAGGC AGACCTGTCCGCGAA RPD_0041 53074 - 51851 - | cytochrome P450 TERM 33 52670 - 52682 + g 72 -6.9 -4.29738 | CCAGTCGACCACACC GGTGC TGC GCGCC TTTTGCTCCATCTCG RPD_0042 55085 - 53163 - | AMP-dependent synthetase and ligase TERM 34 53770 - 53760 - G 70 -8.2 -4.0162 | opp_overlap 53761 GCCGGACAGCACAAA GCCG TCG CGGC GAAAGACTTCGGCGG TERM 35 54140 - 54189 + g 72 -12.9 -3.16564 | gap 2, opp_overlap 54143 TCATCATCATCCAGA GCATGATCGGGGCCGCGACGGCC CACGTT GCCCG-CTCGGCCTCGATCA-GC TTGATGGCCTCCAGC TERM 36 54564 - 54542 - G 72 -13.4 -3.17051 | overlap 54540 CGCCGATGACGAACA CCGCCTCGAC GCT GTCGAGGCCG CCGCGCACCGCATCG TERM 37 55307 - 55330 + G 79 -11.7 -3.88291 | gap 1, opp_overlap 55292 55291 55306 55305, overlap 55306 CGGCCCGGGAGAACC GCG-CGGCCG ACAAG CGGCCGGCGC TTTCTGGCGATCGTC RPD_0043 55237 - 55872 + | regulatory protein, TetR TERM 38 55974 - 55932 - T 100 -22.2 -5.18726 | opp_overlap 55933 55972 55973, overlap 55933 55934 55936 55963 GCGTCAGAACAAAAA GTCAGAGCTCCGGTTCTGAT TCG ATCAGAACCGGAGCTCTGGG CGGGCTACGCGCCAT TERM 39 55973 - 55933 - T 100 -25.7 -3.70512 | opp_overlap 55933 55972, overlap 55932 55934 55936 55963 CGTCAGAACAAAAAG TCAGAGCTCCGGTTCTGAT TCG ATCAGAACCGGAGCTCTGG GCGGGCTACGCGCCA TERM 40 55972 - 55934 - T 100 -29.2 -2.81584 | opp_overlap 55933, overlap 55933 55932 55936 55963 GTCAGAACAAAAAGT CAGAGCTCCGGTTCTGAT TCG ATCAGAACCGGAGCTCTG GGCGGGCTACGCGCC TERM 41 55970 - 55936 - T 100 -26 -2.9432 | opp_overlap 55933, overlap 55934 55933 55932 55963 CAGAACAAAAAGTCA GAGCTCCGGTTCTGAT TCG ATCAGAACCGGAGCTC TGGGCGGGCTACGCG RPD_0044 56848 - 56111 - | pentapeptide repeat-containing protein TERM 42 56673 - 56647 - G 77 -5.1 -4.58395 | gap 1, overlap 56648 56649 56661 56662 CGCATTCCTCAAAAA TCGC-ATCGCGG AAAT CCGCGTTCGCAA AGCGGCAGCGGATGA RPD_0045 57812 - 57042 - | enoyl-CoA hydratase/isomerase RPD_0046 58605 - 57862 - | regulatory protein GntR, HTH RPD_0047 60155 - 58602 - | AMP-dependent synthetase and ligase TERM 43 59311 - 59285 - G 81 -16.6 -3.20723 | CCTGCAGCAAGGGAA TCGGCATCGGCG CGC CACCGACGCCGA GGCTGCGCACCCCCC TERM 44 60266 - 60304 + r 95 -20.3 -3.16742 | gap 1 TTCGACCCAGGGATC G-GGCTGGTCCGGCGGCG CAGG CGACGCCGGACCGGCCGC TTACTGCGCGTTGAG RPD_0048 61537 - 60305 - | ABC-type branched-chain amino acid transport systems periplasmic component-like TERM 45 61505 - 61484 - G 73 -13.7 -3.14132 | opp_overlap 61477 61474, overlap 61436 CGCCGTGGCCAGCAA TGCGGCGCC GGCA AGCGCCGCA TTGCGAAGTAGTCTG RPD_0049 63122 - 61605 - | betaine-aldehyde dehydrogenase TERM 46 63151 - 63172 + r 76 -5.7 -4.56133 | opp_overlap 63145 63150 GGAAAAATATCAGAT GCCGAGCAG ATCG CTGCGCAGC TTTTCGTTGTTGCGG RPD_0050 63843 - 63145 - | ABC transporter related RPD_0051 64612 - 63836 - | ABC transporter related RPD_0052 65649 - 64609 - | inner-membrane translocator RPD_0053 66530 - 65655 - | inner-membrane translocator RPD_0054 67423 - 66611 - | enoyl-CoA hydratase RPD_0055 67848 - 67486 - | hypothetical protein RPD_0056 68026 - 69015 + | integral membrane protein TerC RPD_0057 69012 - 69314 + | hypothetical protein RPD_0058 69369 - 69836 + | tellurite resistance protein-like RPD_0059 70113 - 70730 + | hypothetical protein TERM 47 70992 - 70979 - g 80 -9.5 -4.25104 | opp_overlap 70979 GTCGCCTGACCAAAA CCGGC CGCC GCCGG TTTCTCGACTACTTG TERM 48 70979 - 70992 + G 73 -9.5 -3.91032 | opp_overlap 70979 GTCGCCTGACCAAAA CCGGC CGCC GCCGG TTTCTCGACTACTTG RPD_0060 70717 - 71097 + | regulatory protein, ArsR TERM 49 71138 - 71124 - f 71 -8.6 -3.90112 | TTTTTTGCAAGGAAA CTTTGC GAT GCAAAG AACTCTCTTATCCAA RPD_0061 71131 - 71868 + | undecaprenyl diphosphate synthase RPD_0062 71985 - 73535 + | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 50 73561 - 73551 - f 74 -5.4 -4.62471 | CTGAATCGCCAAAAA GTGT CGG ACAC GTGCGGCTACAAAAA TERM 51 74418 - 74382 - g 73 -10.7 -3.73072 | overlap 74385 AATCGGTCGAGCAAA TGATGGCCTCACGCGGC GTC GCCGCGCCAGACCAACT CGACATCCCCGAACA TERM 52 74415 - 74385 - g 77 -15.4 -2.96695 | overlap 74382 CGGTCGAGCAAATGA TGGCCTCACGCGGC GTC GCCGCGCCAGACCA ACTCGACATCCCCGA TERM 53 74533 - 74520 - g 76 -5.9 -4.56597 | overlap 74522 TGCTTGGGGGAAAAA CGCCG CGCG CAGCG GTCAAGACGAAGAGT RPD_0063 73673 - 74686 + | hypothetical protein RPD_0064 76196 - 75240 - | helix-turn-helix, AraC type TERM 54 77779 - 77755 - g 74 -7.7 -4.26076 | overlap 77731 GGATGCTTATCAAAA GGCCTCGCGCG TCG CTCACGAGGTC GAAGTGCTGGTCAAT RPD_0065 76970 - 79036 + | chemotaxis sensory transducer TERM 55 80564 - 80531 - g 74 -2.4 -4.77157 | gap 2, overlap 80532 CGAACTGATCAAAAA CGCCGACCTCGCGCTC TATC AAGC-CAAGG-CGGCC GGCCGAAACGGATAC TERM 56 80990 - 81002 + G 71 -9.1 -3.85698 | opp_overlap 80992 CTTGGAGGTGGAGAT CACGG AAA CCGTG TTTCTGGAGGACGAA TERM 57 81172 - 81142 - g 73 -4.1 -4.58773 | gap 1 TCGATCAAATCAAAA TCGA-CAAGTTCTT CAGC ATGAACCTGATCGA CCGACGCGACTGCGC RPD_0066 79164 - 81395 + | GGDEF domain-containing protein RPD_0067 83650 - 82163 - | ATP-binding region, ATPase-like TERM 58 83897 - 83922 + G 79 -3.1 -5.07053 | opp_overlap 83877, overlap 83897 83864 83908 GCCAACTGTCCGCGA TGGCCCGGCTC GACC GGGGCGGTTCA TTTTTTGGGCTGCTT TERM 59 84325 - 84310 - g 74 -2.5 -4.72986 | overlap 84312 CACCGTGACCAAAAA GATCG GCACCG CGACC GAGCGCAACCGGATT RPD_0068 83786 - 84514 + | ribonuclease P protein component RPD_0069 84531 - 86396 + | putative inner membrane protein translocase component YidC TERM 60 86499 - 86544 + F 73 -2.8 -4.8048 | gap 3, opp_overlap 86526, overlap 86500 86503 86526 GTTTACGGATCATGC TCTGGAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTGAA TTTTTGGTCTGACGC RPD_0070 86689 - 87342 + | GTPase EngB RPD_0071 87339 - 87707 + | hypothetical protein RPD_0072 87857 - 88816 + | acetylglutamate kinase RPD_0073 88816 - 89970 + | peptidoglycan binding domain-containing protein RPD_0074 89967 - 90668 + | pyrimidine 5-nucleotidase dapD 90762 - 91607 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase RPD_0076 91810 - 92097 + | hypothetical protein TERM 61 92292 - 92324 + G 74 -12.1 -3.53811 | gap 1 ATCGACAATCTCTAC GCACGGAT-CGGCG ATGGCG CGCCGCATCTGTGC TTTGCCGGCCATACC TERM 62 92468 - 92442 - g 74 -10.1 -3.83026 | gap 1 GCGGTCGACATGAAA GGCGGC-ATCGC CTGC GCGGTCGCCGCC GTGCTCGATCATCTC TERM 63 93226 - 93266 + G 70 -11.8 -3.39018 | gap 1, overlap 93224 CGCCGGTCGCGGATC TCG-ACCAGCTCACCGCGA TCTA TCGCGGCGTGCTGGAGCGA TATTTCAAGTCATAA RPD_0077 92115 - 93281 + | succinyl-diaminopimelate desuccinylase RPD_0078 94498 - 93536 - | transposase, IS4 truA 95435 - 94698 - | tRNA pseudouridine synthase A fmt 96541 - 95609 - | methionyl-tRNA formyltransferase TERM 64 95686 - 95654 - G 75 -4.6 -4.58395 | overlap 95656 CGTACCGCGCAAAAA CTCGTCGGCCTGCA TCGGC TGCTTGCCGGCGCG CTGCAATTGCAGCAC RPD_0081 97148 - 96621 - | peptide deformylase RPD_0082 97298 - 98515 + | hypothetical protein RPD_0083 98724 - 100097 + | major facilitator transporter RPD_0084 100554 - 100126 - | hypothetical protein recR 101179 - 100574 - | recombination protein RecR RPD_0086 101613 - 101293 - | hypothetical protein RPD_0087 103522 - 101648 - | DNA polymerase III subunits gamma and tau TERM 65 102246 - 102296 + g 70 -13.1 -3.01924 | gap 1, opp_overlap 102214 GGCGGCGAGGATGCG CCGCGCG-GTGCAGCGCCTCCGCC GGAC GGCAGCGGCGTTGCGCTCCCGCCG TCTTGCGCGAGCATC RPD_0088 103996 - 104481 + | histidine triad (HIT) protein RPD_0089 104486 - 105418 + | NUDIX hydrolase RPD_0090 105415 - 106344 + | PfkB RPD_0091 107100 - 106399 - | hypothetical protein RPD_0092 107604 - 107176 - | hypothetical protein RPD_0093 108380 - 107613 - | hydroxyacylglutathione hydrolase RPD_0094 108557 - 109321 + | methyltransferase type 11 TERM 66 109351 - 109330 - T 100 -15.1 -4.27316 | GCGCTGAACGCAAAA GGGCCGCGC CGAA GCGCGACCC TTGCAATCCTGAGAT RPD_0095 110107 - 109382 - | hypothetical protein TERM 67 110474 - 110484 + r 71 -5.4 -4.44974 | opp_overlap 110474 CCGGGCTCTCGACAA GAAC TCT GTTC TTTTCTGGCCTTTGA RPD_0096 111478 - 110600 - | HemK family modification methylase TERM 68 110656 - 110638 - G 71 -3 -4.57569 | overlap 110639 110640 TCAGCGCCCGAAAAA TGCCGC CGAGATC GCGGCG AGGCGGCCCCGAGAC prfA 112606 - 111521 - | peptide chain release factor 1 RPD_0098 114925 - 112658 - | PTSINtr with GAF domain, PtsP TERM 69 114340 - 114377 + g 73 -12.7 -3.36327 | gap 1, opp_overlap 114339 CGTGCAGCACGACAT GGCCGAGCGCGATGCCGT CCG ACAGGATCGCGC-CGGTC TTGTGGATCGAGTGC TERM 70 114978 - 114952 - R 72 -12.3 -3.36273 | gap 1 TCCTTTGAACAGCAA TC-CCGACGCCG GCTG CGGCGCCGGCGA CGAACCTCTCGACGC RPD_0099 116484 - 115231 - | aspartate kinase TERM 71 116592 - 116637 + H 71 -8.9 -3.92373 | opp_overlap 116591 116590, overlap 116593 TTCGGGCAAGCAATC GGGCCGCCACGGCGGAA CCGACCGGAATA TTCCGCCGGGGCGGACG TTTGTCGGTCGAATC RPD_0100 116843 - 117604 + | 3-demethylubiquinone-9 3-methyltransferase TERM 72 117710 - 117672 - T 81 -12.5 -3.68827 | gap 1, overlap 117674 117675 CACGCATCACGCAAA GATGGTGGGTTACGGCGC AAGG GCGCC-TAACCCACCCTA CATCAAACTCCCCTC TERM 73 117708 - 117674 - T 85 -15.1 -3.42395 | gap 1, overlap 117672 117675 CGCATCACGCAAAGA TGGTGGGTTACGGCGC AAGG GCGCC-TAACCCACCC TACATCAAACTCCCC TERM 74 117707 - 117675 - T 87 -18.6 -2.65116 | gap 1, overlap 117674 117672 GCATCACGCAAAGAT GGTGGGTTACGGCGC AAGG GCGCC-TAACCCACC CTACATCAAACTCCC RPD_0101 118528 - 117713 - | hypothetical protein TERM 75 119235 - 119265 + G 75 -13.3 -3.46285 | overlap 119228 CATCGTGGTGCCGGG GGTGAGCTTCGTC ACCGC GGCGACGCTCACC TTGGTGTTTGCGCTC RPD_0102 118681 - 119580 + | hypothetical protein RPD_0103 120015 - 119581 - | hypothetical protein TERM 76 120107 - 120054 - R 83 -11.8 -4.08974 | ACGCGATGATAGAAA GAGTTCGTCATTCCGGG-GCGCGAGC GCAA GCTCGCGAGCCCGGAATC-CATACTC CGCAGCATCAGCGGT RPD_0104 120727 - 120224 - | hypothetical protein TERM 77 120501 - 120559 + g 78 -10.1 -4.15222 | overlap 120501 GACTCCGCCGCTTGC GG-TGCGACCGCCGTGCCGGCGGCGAC TTCATGC GCCGGCTCCGGCGCG-CGGCCGCGGCC TTTCTTGCCGACGAT RPD_0105 121599 - 120724 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase RPD_0106 121886 - 121596 - | glutaredoxin GrxC TERM 78 121767 - 121806 + g 71 -2.9 -4.66833 | gap 3, overlap 121767 121769 CATCTTCACCCGGAA GCCGG-GATCGACCGAG-AC GTC GTACTCGGT-GAACGCCGCC TTTTTGCGGTTCAGC RPD_0107 122756 - 121938 - | phosphoribosyltransferase TERM 79 122303 - 122277 - G 78 -10 -4.08216 | GTAGCGCCGGGAAAA CCCGCGCCGCCA ATG CAGCGGCACCGG GATCAACAGATCGGC RPD_0108 122868 - 123170 + | hypothetical protein TERM 80 123270 - 123315 + G 78 -15.4 -3.21099 | GTTCGATCGCAGCCT GCTCGC-GGCCCGGCTCGCGCG CGCC CGCACGC-TCGGGCCTGCGAGC TTCCTGCTCGACCGC TERM 81 123412 - 123429 + G 74 -12.7 -3.54424 | TGGACGCCGGGCGAT GCGCTCC CGGC GGAGCGC TTTCCCGGCATCACC TERM 82 123582 - 123592 + G 76 -8.2 -4.25104 | overlap 123566 CCGCCGCGCGCTGAA GCCC GAC GGGC TTTTGCTGGCGGCGC TERM 83 123773 - 123797 + G 81 -10.7 -4.15565 | TCACCGATATCGACC GCGTGGTGGTG CGC TACGACCACGC TTTTGCGCTGATGCA RPD_0109 123232 - 124065 + | methyltransferase type 11 TERM 84 124127 - 124069 - T 100 -20.2 -3.8186 | CAGCCCAAGTAACAA GTGCAGCGTCATGCTTCGAAGCTCGCCC TGC GGGCGAGCACCTCGGCATGACGCCGAAC TACATCAGCAACTCG RPD_0110 124528 - 124127 - | NUDIX hydrolase argJ 125942 - 124701 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 85 125618 - 125665 + g 75 -4.7 -4.62069 | gap 1, overlap 125605 125619 CCGGCTTGCAGCCGA TCGCCTTGGACGCGATCGACGC CGTCA GCGTCG-TCGCCTGCCGGCCGG TTTTTCCGGTGAACG RPD_0112 126722 - 126213 - | OsmC-like protein RPD_0113 127566 - 126781 - | ABC transporter related RPD_0114 128426 - 127566 - | binding-protein-dependent transport systems inner membrane component TERM 86 128497 - 128458 - R 74 -9.9 -3.76952 | gap 1 CGCAGGGAATGGAAA GCCGGGACCACCCTCCCC TGGAG GGGGAGGGTCGGCG-GGC AGCCCGCACAGCGGG RPD_0115 129606 - 128620 - | ABC transporter, substrate-binding protein, aliphatic sulphonates TERM 87 130061 - 130011 - g 74 -12.5 -3.54424 | opp_overlap 130040 130058, overlap 129995 129996 GCCGAGCTCGCCAAA GCGCGCGCCGAGGCCGA-GGCGCAG TTG CTGCGCGATCGGCATGGCCG-GCGC TGCGCCGAGCGGCTG RPD_0116 129849 - 132650 + | PII uridylyl-transferase RPD_0117 132778 - 133347 + | putative threonine efflux protein-like RPD_0118 135261 - 133645 - | HWE histidine kinase RPD_0119 138127 - 135398 - | sensor histidine kinase with PAS/PAC TERM 88 136594 - 136626 + g 73 -10.6 -3.64703 | opp_overlap 136594 TGACGTTACGATAGA CCACCA-CGGCGCCGT CGA ACG-CGCCGCTGGCGG TTTCGATCGGCCGGC RPD_0120 138702 - 138274 - | hypothetical protein RPD_0121 138971 - 140191 + | extracellular ligand-binding receptor RPD_0122 140396 - 140815 + | hypothetical protein RPD_0123 141211 - 140960 - | hypothetical protein TERM 89 141436 - 141424 - g 76 -6.2 -4.44667 | TTGGGCAAGAAGAAA GCCG GCGAA CGGC GGGAGCCGAAATTCG TERM 90 141441 - 141453 + G 71 -9.1 -3.767 | opp_overlap 141448 CGGCGAACGGCGGGA GCCGA AAT TCGGC TTTGCTGAATCGCTC TERM 91 141617 - 141600 - g 70 -2.5 -4.60924 | overlap 141601 CAAATCGCGTAAAAA GGGCGGC CTGC GCAGCCT CGTGACCCGCACAGT TERM 92 143331 - 143304 - g 70 -9.8 -3.71848 | gap 1, opp_overlap 143292, overlap 143289 CTCGCCGACCAAGAA GGCGACCGGC-GG CGG CCTGCCAGTCGAC GTCTGGACCCGCTTC RPD_0124 141403 - 143565 + | penicillin-binding protein 1A TERM 93 143790 - 143776 - T 74 -9.2 -3.86107 | overlap 143779 ACACCAAGAACAGAA GCACGG CGC CCGCGC CGGCCGCGGCAGGGC RPD_0125 144667 - 143897 - | hypothetical protein TERM 94 144736 - 144726 - R 72 -4 -4.56597 | CGCTCGGCGCAAAAA CAAA TCA TTTG CCCAATATACAGGGT RPD_0126 146315 - 144990 - | polyhydroxyalkanoate depolymerase, intracellular TERM 95 146833 - 146872 + H 76 -13.4 -3.17901 | overlap 146819 146840 GTCGCCGCGCCGACC CGCGCGCGATCGGCGATG ATCT CTTTGCCGGCCGCGCGCC TTCCATTCACCCTGT RPD_0127 146905 - 147660 + | methyltransferase type 12 RPD_0128 148540 - 147710 - | hypothetical protein RPD_0129 149331 - 148537 - | ABC transporter related RPD_0130 149441 - 150763 + | periplasmic sensor signal transduction histidine kinase RPD_0131 150866 - 151420 + | response regulator receiver TERM 96 151512 - 151532 + T 70 -11.8 -3.21747 | opp_overlap 151512 CCGGGTGGGGGGAAA GCTCGCCG AACAA CGGCGGGC TTACTGCTCGGGTCG RPD_0132 152090 - 151611 - | hypothetical protein TERM 97 152199 - 152160 - H 84 -15.7 -3.29043 | gap 1, opp_overlap 152163, overlap 152148 152161 152163 AATCCGGCCGCAGAA TCATCGCCGGGACGCCGC AATCG GCGGCG-CGCGGCGATGC CTTGAAACGCGGGCT TERM 98 152198 - 152161 - H 87 -19.2 -2.57211 | gap 1, opp_overlap 152163, overlap 152148 152160 152163 ATCCGGCCGCAGAAT CATCGCCGGGACGCCGC AATCG GCGGCG-CGCGGCGATG CCTTGAAACGCGGGC TERM 99 152196 - 152163 - H 81 -16 -2.82623 | gap 1, opp_overlap 152163, overlap 152148 152161 152160 CCGGCCGCAGAATCA TCGCCGGGACGCCGC AATCG GCGGCG-CGCGGCGA TGCCTTGAAACGCGG TERM 100 152163 - 152196 + H 79 -16 -2.52464 | gap 1, opp_overlap 152148 152163 152161 152160 CCGGCCGCAGAATCA TCGCCGGGACGCCGC AATCG GCGGCG-CGCGGCGA TGCCTTGAAACGCGG RPD_0133 152241 - 153359 + | von Willebrand factor, type A TERM 101 153619 - 153609 - g 76 -8.2 -4.25388 | GACACCAAAACCAAA GCCG GCG CGGC GATCATTCCGGTCAC RPD_0134 153579 - 154247 + | beta-lactamase-like TERM 102 154481 - 154496 + F 71 -8.2 -3.90318 | TCCGAACCTTTGGTT CGCGGC TGCG GCTGCG TTTGTGACGTAGTCG RPD_0135 154717 - 155706 + | helix-turn-helix, AraC type TERM 103 155763 - 155737 - T 93 -18.7 -3.36452 | opp_overlap 155733 155732 AGCCGGCAATACGAA GCGGGCCGCCC GATAG GGGCGACCCGC ACGCTTGGTCGATAT RPD_0136 156233 - 155814 - | hypothetical protein TERM 104 156420 - 156439 + r 74 -12.8 -3.33696 | opp_overlap 156395 CCGCCGTTCGGAACC GTCGGCCG GCCT CGGCCGGC TTCCTTGCGACACCC RPD_0137 157641 - 156463 - | esterase, PHB depolymerase TERM 105 156553 - 156576 + g 77 -10.9 -3.76952 | overlap 156554 CGGTTCCTGAGTCCT GCGCGCGCC TGCCGC GGCGCGCGG TTTGGATTGGCTCGC TERM 106 156554 - 156575 + g 71 -14.4 -2.8585 | overlap 156553 GGTTCCTGAGTCCTG CGCGCGCC TGCCGC GGCGCGCG GTTTGGATTGGCTCG TERM 107 157827 - 157802 - R 100 -12.5 -5.1287 | overlap 157791 157803 GCCACACGCAAAAAA GCCTGCGCGCC GATC AGCGCGCAGGA AGCGAGGAAGCAGCC TERM 108 157826 - 157803 - R 91 -16 -3.66999 | overlap 157791 157802 CCACACGCAAAAAAG CCTGCGCGCC GATC AGCGCGCAGG AAGCGAGGAAGCAGC RPD_0138 158101 - 157856 - | hypothetical protein RPD_0139 159605 - 158217 - | chromate transporter RPD_0140 160213 - 159602 - | hypothetical protein RPD_0141 160742 - 160419 - | hypothetical protein TERM 109 160876 - 160864 - H 74 -6.2 -4.4261 | TGGGGAACAGGAAAA CCGG CGTGT CCGG TCGGGTGACCAAGGT RPD_0142 160993 - 161466 + | hypothetical protein RPD_0143 161499 - 161972 + | hypothetical protein RPD_0144 161969 - 162517 + | hypothetical protein RPD_0145 163710 - 162595 - | hypothetical protein TERM 110 162854 - 162801 - G 93 -19.4 -2.78816 | gap 1 CGAGCGCCGACGACA CCGCCCGCAGCGGCGGCGGCGCGCG GCGAT CGCGCAGCGCCGAGGC-GCTGGCGG CCAGATGCAGCGTCG RPD_0146 163879 - 165252 + | MmgE/PrpD RPD_0147 165321 - 165929 + | hypothetical protein RPD_0148 166201 - 167619 + | malonyl-CoA decarboxylase RPD_0149 167670 - 168587 + | Pirin-like TERM 111 169096 - 169039 - g 80 -15.6 -3.23853 | gap 3, opp_overlap 169056, overlap 169037 169040 169092 GGCCTGGAAGGAATA CGCCGC-CTCCGGCACGCTGGCCGGCGAG ACG CT-GCCGGCCGGCCTGCAGGAGAGCGA-G CGCCTCGCGCCGCCG TERM 112 169097 - 169040 - g 93 -19.2 -2.54098 | gap 3, opp_overlap 169056, overlap 169037 169039 169092 GCCTGGAAGGAATAC GC-CGC-CTCCGGCACGCTGGCCGGCGAG ACG CT-GCCGGCCGGCCTGCAGGAGAGCGAGC GCCTCGCGCCGCCGA RPD_0150 168656 - 169573 + | phosphoribosylaminoimidazole-succinocarboxamide synthase RPD_0151 169820 - 170602 + | enoyl-CoA hydratase radC 171424 - 170705 - | DNA repair protein RadC TERM 113 171567 - 171520 - R 83 -15.4 -3.15212 | overlap 171507 AACCAGGACAGTCAA TCCGGGGGCCGAAGCCGGCTCG TCGG CGAGCCGGCTTCGGCGCTATGC GGCGCGCACTGAATC RPD_0153 173370 - 171562 - | chemotaxis sensory transducer RPD_0154 173763 - 174749 + | hypothetical protein RPD_0155 175847 - 175023 - | methionine aminopeptidase, type I RPD_0156 177258 - 175945 - | MscS mechanosensitive ion channel TERM 114 176202 - 176245 + g 80 -17.5 -2.77899 | gap 1, overlap 176199 GCGGCACCGCGGCGG CGACGTCGAT-CGCGAGCCG GCAGA CGGTACGCGGATCGGCGTCG TAATTGGTCGCAAAG TERM 115 177863 - 177896 + G 70 -8.7 -3.99592 | overlap 177857 177856 GGCGCTGCTCGCCGG CGCCGTCGTGGCCTC GACC GACGCCGCCGCGGTG TTTCTGCTGGTGCAT RPD_0157 177483 - 179273 + | potassium/proton antiporter mepA 180227 - 179274 - | penicillin-insensitive murein endopeptidase TERM 116 180054 - 180021 - G 73 -13.1 -3.28712 | gap 1, opp_overlap 180047 GCCCCTGGCGTAGAA TCCGATCGGCCGCGCC GGC AGCGCGGCCGG-CAGA TAGCGCCGGGCGAAC RPD_0159 180631 - 182859 + | GGDEF domain-containing protein RPD_0160 184008 - 183064 - | hypothetical protein RPD_0161 184346 - 185770 + | twin-arginine translocation pathway signal TERM 117 185943 - 185916 - T 74 -12.6 -3.2963 | ACGATCGCGGCAGAA CTCCCTCTCCCG CTTG CGGGGGAGGGTG GGGTGGGGGCGACAC TERM 118 186001 - 186019 + T 72 -2.3 -4.71828 | gap 1 CTCGCGACGAACTAT CCGCGCAG CACG CCGC-CGG TTTTCTTGGTCACCT pheT 188471 - 185997 - | phenylalanyl-tRNA synthetase subunit beta RPD_0163 189137 - 188553 - | hypothetical protein pheS 190357 - 189275 - | phenylalanyl-tRNA synthetase subunit alpha TERM 119 190404 - 190384 - R 74 -14.7 -2.6563 | opp_overlap 190381, overlap 190380 190381 CCCCTCAAGAAGTCA TGCCCGGGC TTG ACCCGGGCA TCCATCGCTTCTCGA rplT 190860 - 190501 - | 50S ribosomal protein L20 TERM 120 190647 - 190699 + g 79 -13.4 -3.68222 | gap 2 TGTAAGTCATGCCGA GCGGACGCACCGCG-GC-GTTGATGC GCT GGATCCACAGCGCGCGGAACGTCCGC TTCTTGCGCTTGCGA rpmI 191148 - 190948 - | 50S ribosomal protein L35 TERM 121 191380 - 191345 - H 89 -16.8 -3.42056 | gap 1, opp_overlap 191344 ATTGGCAACGCATAA CGCCGGCCGGCG-CTGA TGT CCGGCCGCCAGCCGGCG CGACCGACCCAAAAT RPD_0167 191512 - 191937 + | hypothetical protein TERM 122 192282 - 192258 - T 100 -17.9 -5.08255 | ATCCCCAAAAGAAAA GGCCCGCCAGA TCA TCTGACGGGCC ACACGCGTACTCAAA infC 192718 - 192320 - | translation initiation factor IF-3 RPD_0169 193195 - 193992 + | hypothetical protein TERM 123 194041 - 194019 - T 89 -14.9 -3.96216 | TGGTGAGCCAAATAA CCCTCTCCC CTTGT GGGAGAGGG TGGCGAGCGCAGCGA RPD_0170 195240 - 194098 - | 4Fe-4S ferredoxin, iron-sulfur binding RPD_0171 195992 - 195300 - | glutathione S-transferase-like RPD_0172 196204 - 197010 + | undecaprenyl pyrophosphate phosphatase TERM 124 197056 - 197012 - T 72 -13.6 -2.69471 | gap 1, opp_overlap 197015, overlap 197011 CGATGGGCAGATAAT CGCACGTCCGAATGCCGGCGT CGGA ACGCCGG-ACTCGGACGCTTG CTGACCGCTATCGGC TERM 125 197015 - 197053 + T 76 -13.9 -3.15249 | gap 1, opp_overlap 197012 197011 TGGGCAGATAATCGC ACGTCCGAATGCCGGCGT CGGA ACGCCGG-ACTCGGACGC TTGCTGACCGCTATC RPD_0173 198036 - 197071 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 126 198064 - 198081 + H 73 -11.3 -3.61654 | opp_overlap 198063 198060 198059 TGTGAACAAATGCAG TGCCGGA AACG TCCGGCA TTTGCCGTCAATCTG RPD_0174 198454 - 199068 + | 3'-5' exonuclease RPD_0175 199311 - 200081 + | hypothetical protein RPD_0176 200078 - 200743 + | OstA-like protein TERM 127 201003 - 200970 - g 74 -10.1 -3.76952 | overlap 200964 200971 CCGAGCCAACGCAAA CGCCGACACCGGCGC CAGC GCGTCCGCGTCGGCC TGCCGCGACGCAACC TERM 128 201123 - 201164 + G 73 -13 -3.25896 | opp_overlap 201162, overlap 201121 TCCGCCGCGGCGAGG CCGTGGGCCTGCTCGG-GCC GAAC GGCGCCG-GCAAGACCACGG TGTTCTACATGATCA RPD_0177 200801 - 201754 + | ABC transporter related TERM 129 201894 - 201910 + F 72 -4.3 -4.57569 | opp_overlap 201894 GGCGTAAGCAAGAAA CGGACCA ATT TGGATCG TTTTTGCCGCCATGG TERM 130 203048 - 203080 + G 89 -14.8 -4.11216 | AGACCGCAACCTGGC TGGTGCGCGCGCTC GACCA GCGCGCTCGCACCA TTTTGAAGGTCGCGA RPD_0178 201922 - 203562 + | RNA polymerase factor sigma-54 RPD_0179 203618 - 204226 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 131 204918 - 204903 - g 87 -6.8 -5.0133 | gap 1, opp_overlap 204907 204908, overlap 204904 204905 GACGTCGCCAAAAAA CTGCGCG CCT CGCGC-G ACGCCCAGGCGATTT RPD_0180 204510 - 204971 + | PTS IIA-like nitrogen-regulatory protein PtsN RPD_0181 205741 - 205475 - | hypothetical protein RPD_0182 206217 - 205792 - | heat shock protein Hsp20 RPD_0183 207462 - 206368 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 132 206529 - 206552 + g 72 -13.8 -3.05384 | TGCTGCTGATCGCGG CGAGGTCGCC GCCT GGCGACCGCG TTCCGTAGACAAAGG TERM 133 206763 - 206741 - G 77 -16.4 -2.79183 | TCGAGCGGGATCAGA TTCATCGGCG GCG CGCCGATGAA GGAGGCGACGAAGGT RPD_0184 208316 - 207468 - | binding-protein-dependent transport systems inner membrane component RPD_0185 209230 - 208316 - | binding-protein-dependent transport systems inner membrane component RPD_0186 210648 - 209323 - | extracellular solute-binding protein TERM 134 210392 - 210450 + g 73 -9.6 -3.91897 | gap 4, opp_overlap 210378 210389, overlap 210390 210413 ACCTGCATGATATGC GGC-GCGTTGCCGGCGCG--GAACGC-GGC GAT GCCGGCGTTCATCGTGTCGGCGTAGCCGCC TTTGTAACTCGGGAC RPD_0187 212059 - 210854 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 135 212304 - 212334 + r 71 -13.9 -2.63901 | overlap 212303 TGGCCCCTGACCTTG GGTGCGCGCGGGC AAATC GTCCGCGCGCGGC ATTCGTTGATCACAT TERM 136 212408 - 212386 - R 76 -9.9 -3.87815 | opp_overlap 212386 212396, overlap 212396 CCTCATCGCCAGAAA CGTCACCAA TGATG TCGGTGACG TCTTCATCCCCTTCT RPD_0188 212821 - 212363 - | hypothetical protein RPD_0189 212916 - 214253 + | 3-phosphoshikimate 1-carboxyvinyltransferase RPD_0190 214945 - 214271 - | hypothetical protein RPD_0191 215116 - 215754 + | cytidylate kinase rpsA 216049 - 217746 + | 30S ribosomal protein S1 TERM 137 217775 - 217797 + F 100 -18.4 -5.33026 | opp_overlap 217772 217769 TACGCCAAACGATCA GGGCTCCGGC ATC GCCGGGGCCC TTTTTCTTTGACTTC RPD_0193 217997 - 218977 + | signal peptide peptidase SppA, 36K type TERM 138 218979 - 218999 + F 70 -10.3 -3.55548 | GCGGCTCGCGCTGAC GGCTCGCGG TAT CCGAGGGCC TTTAAAACCGTCTTG TERM 139 219296 - 219329 + G 72 -13.8 -3.05844 | gap 1, opp_overlap 219288 TGAAGCATCGGCCCG CGCGCGCCGG-CCGC AATCC GCGGACTGGCGCGCA TGTTCCGGTCGACCA ihfB 219124 - 219429 + | integration host factor subunit beta RPD_0195 219442 - 219855 + | hypothetical protein TERM 140 219976 - 219998 + G 70 -11.2 -3.55603 | overlap 219975 219980 AGCGGCGGTCGCTGC CGGCGCCGAC ATG GTCGGCTTCG TGTTCTTTCCCGCTT TERM 141 219980 - 219994 + G 72 -11.4 -3.50555 | overlap 219976 219975 GCGGTCGCTGCCGGC GCCGAC ATG GTCGGC TTCGTGTTCTTTCCC RPD_0196 219911 - 220567 + | N-(5'-phosphoribosyl)anthranilate isomerase RPD_0197 220569 - 221783 + | tryptophan synthase subunit beta TERM 142 222587 - 222529 - g 73 -13.2 -3.31144 | gap 3, overlap 222513 CCTCGACGCCGACAA CCG-CGCCACCAAGGCGACCGTCGGTGCG GTAG CGGACCT--GGTCGCCTCGCTGGCGGCGG GCGTTCGCGGCGCCA trpA 221783 - 222619 + | tryptophan synthase subunit alpha RPD_0199 222727 - 223695 + | acetyl-CoA carboxylase subunit beta TERM 143 223985 - 223969 - g 84 -13.7 -3.90112 | TCCGCGTCAACGAAA CCGTCCG TCT CGGACGG CCGGGCGGCGGCGCG RPD_0200 223692 - 225038 + | FolC bifunctional protein TERM 144 225164 - 225144 - T 90 -15.4 -3.75153 | CCCCCTCAACGCAAA CGGCCGGC TGATC GCCGGCCG TTCGAGGCAGATAGA TERM 145 225276 - 225318 + T 100 -15 -5.18726 | opp_overlap 225237 225236 225300, overlap 225256 225277 225280 ATCAGGTCATCCTGC CCCAGAGCTTCGGTTCTGAT AGA ATCAGAACCGAAGCTCTAAC TTTTTGTTCTGACGC TERM 146 225277 - 225317 + T 100 -18.5 -3.70512 | opp_overlap 225237 225236 225300, overlap 225256 225276 225280 TCAGGTCATCCTGCC CCAGAGCTTCGGTTCTGAT AGA ATCAGAACCGAAGCTCTAA CTTTTTGTTCTGACG TERM 147 225280 - 225314 + T 100 -24.6 -2.9432 | opp_overlap 225236 225300, overlap 225256 225277 225276 GGTCATCCTGCCCCA GAGCTTCGGTTCTGAT AGA ATCAGAACCGAAGCTC TAACTTTTTGTTCTG RPD_0201 225710 - 225390 - | thioredoxin RPD_0202 229286 - 225807 - | UvrD/REP helicase TERM 148 226407 - 226434 + g 78 -14.8 -3.29144 | gap 1, opp_overlap 226405 TGGCCGCAACAGATT GTCCG-GCCGGCG CAG CGCCGGCGCGGCC TTGTGCAGCCAGTCC RPD_0203 232432 - 229283 - | hypothetical protein RPD_0204 233277 - 232504 - | nucleotidyl transferase TERM 149 233406 - 233438 + r 91 -5.4 -5.24416 | gap 1, opp_overlap 233401, overlap 233409 GCGATCGAAACTCAC GCAGCCGTGGCTGAC GTGC GGCTGCC-CGGCTTC TTTTTCTTGTCGTTG TERM 150 233409 - 233435 + r 80 -5.7 -4.68512 | gap 1, opp_overlap 233401, overlap 233406 ATCGAAACTCACGCA GCCGTGGCTGAC GTGC GGCTGCC-CGGC TTCTTTTTCTTGTCG RPD_0205 233716 - 233402 - | hypothetical protein RPD_0206 235447 - 233930 - | hypothetical protein RPD_0207 237957 - 235444 - | PAS/PAC sensor signal transduction histidine kinase TERM 151 236962 - 236944 - G 84 -17.4 -3.15544 | opp_overlap 236942 CGCCATCCGCACCAA CGCGGCGC CGA GCGCCGCG GCTTCGCTCGCATCC RPD_0208 238595 - 238137 - | deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) RPD_0209 240127 - 238592 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 152 240136 - 240086 - G 100 -21.5 -3.15663 | gap 2, opp_overlap 240099, overlap 240090 AGGCAGTGCCAGCAA GCC--ATGGATGCAATGCCATCGCG CAG CGCGATCGCATTGCATCCATCAGGC GCTTGCAATGCACTC TERM 153 240130 - 240090 - G 100 -25.7 -2.56715 | opp_overlap 240099, overlap 240086 AGTGCCAGCAAGCCA TGGATGCAATGCCATCGCG CAG CGCGATCGCATTGCATCCA TCAGGCGCTTGCAAT RPD_0210 241724 - 240150 - | 2-polyprenylphenol 6-hydroxylase TERM 154 241365 - 241381 + g 74 -12.3 -3.54424 | opp_overlap 241365 GCTGAGGCTGACAAA GGCCTGT GCG ACAGGCC TTTCCAGCGATGCAG TERM 155 241381 - 241365 - G 81 -12.3 -3.87815 | opp_overlap 241365 GCTGAGGCTGACAAA GGCCTGT GCG ACAGGCC TTTCCAGCGATGCAG ubiE 242482 - 241721 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 156 242272 - 242246 - G 85 -18.1 -2.70932 | overlap 242248 CGCGGCGCGGAACGA GATGTCGCCGG TGCCG CCGGCGACATC GAGCAGCCGGAACGG TERM 157 242270 - 242248 - G 73 -14.9 -2.90075 | overlap 242246 CGGCGCGGAACGAGA TGTCGCCGG TGCCG CCGGCGACA TCGAGCAGCCGGAAC RPD_0212 242693 - 243574 + | formamidopyrimidine-DNA glycosylase RPD_0213 244705 - 243743 - | transposase, IS4 TERM 158 244835 - 244825 - R 71 -8.2 -3.90112 | GGGCCTTGAATCAAA CGCG AAC CGCG ATCGAGATGATTCGA TERM 159 245006 - 244975 - R 74 -5.1 -4.58395 | gap 2, opp_overlap 244975 244978, overlap 244977 244978 CGCAGCGCGCAAAAA GAGGCGGCCGGACAC CGAG GCG-CCGGCCGC-TG AGTTTGGTAGACCTC TERM 160 245005 - 244977 - R 76 -10.2 -3.90762 | gap 1, opp_overlap 244975 244978, overlap 244975 244978 CAGCGCGCAAAAAGA GGCGGCCGGACAC CGAG GCG-CCGGCCGCT GAGTTTGGTAGACCT TERM 161 245004 - 244978 - R 74 -13.7 -2.93975 | gap 1, opp_overlap 244978 244975, overlap 244977 244975 AGCGCGCAAAAAGAG GCGGCCGGACAC CGAG GCG-CCGGCCGC TGAGTTTGGTAGACC RPD_0214 246779 - 245415 - | peptidoglycan binding domain-containing protein TERM 162 247004 - 247036 + G 70 -13.3 -2.98823 | overlap 247007 CGCGGGTGCTGGTGG TGGGCGCCGGCGGGC TCG GCGCGCCGGTGCTGA TGTATCTCGCCGCGG TERM 163 247007 - 247033 + G 80 -17.2 -2.72799 | overlap 247004 GGGTGCTGGTGGTGG GCGCCGGCGGGC TCG GCGCGCCGGTGC TGATGTATCTCGCCG TERM 164 247416 - 247404 - g 76 -2.6 -4.91109 | CGCCCACGAGAAAAA CCCG GCCGG CGAG TTCAACCCGACCTAT RPD_0215 246901 - 247701 + | UBA/THIF-type NAD/FAD binding fold RPD_0216 248824 - 247862 - | transposase, IS4 RPD_0217 250041 - 249040 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 165 249248 - 249263 + g 75 -11.8 -3.64703 | ACGTCGAGGCCGGCG CCGGCG ATGT CGCCGG TTTCGATCAGCCGGG TERM 166 250341 - 250324 - g 74 -12.7 -3.61398 | opp_overlap 250327 TCGCTGGTGCAATAA CAGGCGC TGCG GCGCCTG CGCTTGCTGCGAAAG RPD_0218 250275 - 250799 + | hypothetical protein RPD_0219 251569 - 251081 - | ferric-uptake regulator RPD_0220 251784 - 252347 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase RPD_0221 252427 - 253653 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 167 254365 - 254342 - g 70 -11 -3.53091 | gap 1, opp_overlap 254342 ATGGGCGTGGCGAAA GCG-GCGCTGG AAG CCAGCACGCGC TATCTCGCCTCCGAC RPD_0222 253850 - 254695 + | enoyl-(acyl carrier protein) reductase TERM 168 254713 - 254696 - T 70 -9.8 -3.58428 | overlap 254692 GCGAAAGAGAAGTAA GCGGCG CGCTGC CGCCGC TCTCACCCGCTCTGC TERM 169 255019 - 254988 - T 79 -16.6 -2.51133 | opp_overlap 254989 254994, overlap 254994 CATTCACCCAGCAAC GCAAAAGGGCGGCC CGGA GGCCGCCCTTTCGT ATCTTGATATCAGCG TERM 170 254989 - 255018 + T 91 -17.9 -3.16071 | opp_overlap 254988 254994, overlap 254994 ATTCACCCAGCAACG CAAAAGGGCGGCC CGGA GGCCGCCCTTTCG TATCTTGATATCAGC TERM 171 254994 - 255013 + T 95 -16.4 -3.94333 | opp_overlap 254988 254994, overlap 254989 CCCAGCAACGCAAAA GGGCGGCC CGGA GGCCGCCC TTTCGTATCTTGATA TERM 172 255013 - 254994 - T 100 -16.4 -4.30014 | opp_overlap 254994 254989, overlap 254988 CCCAGCAACGCAAAA GGGCGGCC CGGA GGCCGCCC TTTCGTATCTTGATA RPD_0223 257237 - 255039 - | catalase/peroxidase HPI TERM 173 257312 - 257346 + H 70 -12.2 -3.1739 | gap 1, opp_overlap 257295 257315 257316, overlap 257315 257341 TGAATGGATGATCCA GA-ACGCCGCGGACG GGGGGG CGTCCGCGGCATCTC TTCCTGGGGTGATGT TERM 174 257315 - 257342 + H 76 -14.1 -3.13371 | opp_overlap 257315 257316, overlap 257312 257341 ATGGATGATCCAGAA CGCCGCGGACG GGGGGG CGTCCGCGGCA TCTCTTCCTGGGGTG TERM 175 257342 - 257315 - H 88 -16.3 -3.37975 | opp_overlap 257315 257312 257341, overlap 257316 ATGGATGATCCAGAA CGCCGCGGACG GGGGGG CGTCCGCGGCA TCTCTTCCTGGGGTG TERM 176 257341 - 257316 - H 83 -17.6 -2.62463 | opp_overlap 257315 257312, overlap 257315 TGGATGATCCAGAAC GCCGCGGACG GGGGGG CGTCCGCGGC ATCTCTTCCTGGGGT TERM 177 257813 - 257831 + G 83 -12.4 -4.08767 | overlap 257814 TGCTGCCGAAGGTGC TGCCGCTG CTG CAGCGGCG TTTTCCCGAGCTGCG TERM 178 257814 - 257830 + G 72 -13.7 -3.05046 | overlap 257813 GCTGCCGAAGGTGCT GCCGCTG CTG CAGCGGC GTTTTCCCGAGCTGC RPD_0224 257482 - 258420 + | LysR family transcriptional regulator RPD_0225 260194 - 258512 - | methyl-accepting chemotaxis protein RPD_0226 262195 - 260510 - | methyl-accepting chemotaxis protein TERM 179 262579 - 262552 - R 73 -8.4 -4.08317 | gap 1 TAATTCGAAAGCAAA CTCCG-CACTCGT TTT ACGAGCGTCGGCG CCGACGCGCGGCCGA TERM 180 262774 - 262753 - R 100 -15.1 -4.87803 | GAGTTGCAAAGAAAA GGGGCGACC TTTC GGCCGCCCC TTCAACACATATCAG RPD_0227 264990 - 262822 - | polynucleotide phosphorylase/polyadenylase TERM 181 265182 - 265197 + r 74 -11.8 -3.53012 | TCTCCGACCCGCGGG CGGGCC ACAC GGCCCG TTTACGGCCCAGCCG TERM 182 265260 - 265232 - R 81 -13.2 -3.72695 | opp_overlap 265238 ATGCGGCTGAGCAAA CACACAGGCGAA CTCAC TGCGCCTGTGTG GACGGTTCGGCCGGA rpsO 265603 - 265334 - | 30S ribosomal protein S15 truB 266712 - 265606 - | tRNA pseudouridine synthase B TERM 183 265799 - 265773 - G 100 -11.4 -4.63218 | GTCCGCGCAACAAAA CGGCCTGGCCCC GAT GGAGCCTTGCCG CATCAGCCCGTGTGA TERM 184 265892 - 265860 - G 93 -15.6 -4.14392 | gap 1, opp_overlap 265860, overlap 265861 TCTCAACGGGCAAAA GCGCGTC-GGCGAGG CTAC CCTCGCCTGACGCGG CTCTATCGCACAAAG TERM 185 265860 - 265893 + g 76 -15.4 -2.87132 | gap 2, opp_overlap 265860 265861 TCTCAACGGGCAAAA GC-GCGTC-GGCGAGG CTAC CCTCGCCTGACGCGGC TCTATCGCACAAAGC TERM 186 265891 - 265861 - G 90 -19.1 -3.08314 | gap 1, opp_overlap 265860, overlap 265860 CTCAACGGGCAAAAG CGCGTC-GGCGAGG CTAC CCTCGCCTGACGCG GCTCTATCGCACAAA rbfA 267122 - 266712 - | ribosome-binding factor A TERM 187 267140 - 267175 + r 71 -9.7 -3.72576 | gap 1, opp_overlap 267139 267138, overlap 267142 TCGTCTCTCAAAACT GTCGT-CATGCCCGCG CGGGT CGCGGGCATTCACGTC TTTGATACGGAAAAG TERM 188 267142 - 267173 + r 71 -10.9 -3.44848 | gap 1, opp_overlap 267139 267138, overlap 267140 GTCTCTCAAAACTGT CGT-CATGCCCGCG CGGGT CGCGGGCATTCACG TCTTTGATACGGAAA infB 269945 - 267294 - | translation initiation factor IF-2 TERM 189 268214 - 268248 + g 76 -14.9 -3.19192 | overlap 268237 TGCCGCGCTGGACCA GCACGGTCGCGACCG GACCA CGGCCGCGATCGAGC TTGGCTTCGATCACG TERM 190 269375 - 269391 + g 70 -10.8 -3.62046 | overlap 269390 TGCTGGTGGAGGCGG GCCGGC CGTCA GCCGGC TTCTTGGCGGGCTCG TERM 191 269792 - 269807 + g 76 -6 -4.56597 | overlap 269776 GGCCATCGCCGCCGA CGCGAC GCTT GCCGCG TTTTTCGACCACCAC RPD_0232 270732 - 269938 - | hypothetical protein TERM 192 270662 - 270679 + g 74 -2.6 -4.7254 | overlap 270663 CGCGAAACTGCGCAC ATCCGC TCGGTC GCGGAC TTTTTGGTCCGCGGT TERM 193 270883 - 270909 + r 73 -13 -3.12351 | gap 1, opp_overlap 270867, overlap 270868 CGGCCCGGATCGCAA GGCGCGGGCGG TTTACT CCGCC-GCGCC TTCGGTCTCCGCACC nusA 272517 - 270895 - | transcription elongation factor NusA RPD_0234 273308 - 272520 - | hypothetical protein TERM 194 272651 - 272661 + g 70 -2.4 -4.62783 | GCGGCTTGGGCTTCG GCGC GCT GCTC TTTTTCGGATCGCTG TERM 195 273371 - 273348 - H 100 -11 -5.4505 | gap 1, opp_overlap 273369 273370 TCGGGTAACAAAAAA GAGCGGGTCCC GGG GGG-CCCACTC TCGATACGCGGTCGT TERM 196 274048 - 274060 + G 72 -6.9 -4.17089 | overlap 274049 GATGGTCGCGGTGAA TGCCG GCG CGGCG TTTTCAGCCTTTGGC RPD_0235 273587 - 274672 + | hypothetical protein TERM 197 274678 - 274717 + T 71 -10.8 -3.53012 | gap 1, opp_overlap 274673, overlap 274681 GATGAACTGACCCCG TGATCATGC-CGCGTCGCG CGG CGCGACCAGAGCATGATTA TTTCCGAAAACCGGC TERM 198 274681 - 274714 + T 76 -10.3 -3.90744 | gap 1, opp_overlap 274673, overlap 274678 GAACTGACCCCGTGA TCATGC-CGCGTCGCG CGG CGCGACCAGAGCATGA TTATTTCCGAAAACC trmB 275575 - 274805 - | tRNA (guanine-N(7))-methyltransferase RPD_0237 276113 - 275694 - | XRE family transcriptional regulator lnt 277914 - 276304 - | apolipoprotein N-acyltransferase TERM 199 277034 - 277018 - G 77 -3.7 -4.72272 | GCGCGTGAGGAAAAA CGGAA AAGCTGA TTCCG GCCAGATCAACAGCG RPD_0239 279053 - 277926 - | HlyC/CorC family transporters TERM 200 277992 - 278036 + g 71 -12.8 -3.34895 | overlap 277991 TGCAGGCTGATCGGA CGC-CGGTTCGCGCCGGCGCGT CTC ACGCGGCCGCGCGA-CGGCGCG TTCCTTGCGGATGCC RPD_0240 279642 - 279055 - | hypothetical protein RPD_0241 280697 - 279642 - | PhoH-like protein TERM 201 280572 - 280590 + g 70 -11.6 -3.40403 | GCCATACGGCCCGAC CAGCGCCG AGG CGGCGCGG TTGTCGTCGAAGGCG RPD_0242 282124 - 280703 - | tRNA-i(6)A37 modification enzyme MiaB TERM 202 281697 - 281659 - G 85 -15.8 -3.73107 | opp_overlap 281660 281672 281673, overlap 281652 TGACGAAAGCCGAAA TGCCGCGGGCGCGGATGG TTT CCGGCCGCGGCTGCGGCA GGAAGCCGAATTTGT TERM 203 282214 - 282182 - R 73 -11.2 -3.56594 | gap 1, overlap 282186 CGAAAGTCGGCGAAA TCCAGCCGGCGGCGC TTAG GCGACCCCGGC-GGA AGAGATTTTATATAA RPD_0243 282875 - 282222 - | HAD family hydrolase TERM 204 282513 - 282486 - G 73 -6.2 -4.36914 | gap 1, overlap 282489 282491 282501 CTGCTCGGCAGAAAA CAAGT-TCGGCGC AAA GCGCCGATACAGG CCGGTGCGGTTCAGC TERM 205 282510 - 282489 - G 93 -10.9 -4.30995 | gap 1, overlap 282486 282491 282501 CTCGGCAGAAAACAA GT-TCGGCGC AAA GCGCCGATAC AGGCCGGTGCGGTTC TERM 206 282568 - 282535 - G 77 -13.1 -3.57144 | gap 1 CGGTTCAGCGCGAAA GCGATGCGCTCCAGCG TGC CGCTGGAG-GCGACGC AGACCGGCTGCGTGA TERM 207 282905 - 282943 + r 73 -10.9 -3.57144 | gap 1, opp_overlap 282892 282890 282911, overlap 282909 TATCAGCGTGCGACG CGACAAGGCTGCGCGGCG ATGA CGCCCCGCAGCCGA-TCG TTTCGAGATGAAGGG TERM 208 282938 - 282911 - R 93 -18.4 -3.32844 | opp_overlap 282909 282905 CGTGCGACGCGACAA GGCTGCGCGGCG ATGA CGCCCCGCAGCC GATCGTTTCGAGATG RPD_0244 283401 - 282970 - | ferric-uptake regulator RPD_0245 283948 - 283463 - | ribosomal-protein-alanine acetyltransferase RPD_0246 284654 - 283959 - | peptidase M22, glycoprotease RPD_0247 285364 - 284798 - | nitrogen-fixing NifU-like RPD_0248 286010 - 285516 - | hypothetical protein RPD_0249 287215 - 286169 - | tryptophanyl-tRNA synthetase TERM 209 287351 - 287304 - R 88 -17.6 -3.07935 | gap 1 AGGCTAGCCACGCAA GCCGCGCGGCC-GCCGCAGCGCC CCC AGCGCCGCGGCCGGGCGCACCAC CCCGAACAGGATCAG RPD_0250 288848 - 287292 - | integral membrane protein MviN TERM 210 289043 - 289057 + H 73 -7 -4.3739 | overlap 289015 CGCGCCTTCGCGCAG CCGGCG ATG CACCGG TTTTGTCCCGCAATA TERM 211 290035 - 290007 - g 70 -11.5 -3.40403 | CGCCGGCTACGAGAA CGCCGGCCGGCTC GCC GCGCTGGCCGCCG CCGAAGTGATCCAGC RPD_0251 289114 - 290115 + | PfkB TERM 212 290138 - 290172 + T 81 -15.7 -2.98823 | gap 1, opp_overlap 290123 CTCTCCCCCGAGTCG TTCCGGGG-CGCGGGC GCAA GCTCGCGACCCCGGAC TCTCTCTCCGCAGAA RPD_0252 291956 - 290262 - | acyl-CoA synthetase TERM 213 290648 - 290694 + g 93 -15.3 -4.12188 | gap 2 CGTCGATCACCGCGA GATCGCCGGTGTGCATCCAGCCG GTG CGG-TCGA-GCACATCGGCGGTC TTTTCCGCCTCGTCC TERM 214 292084 - 292030 - R 100 -20.8 -4.35518 | opp_overlap 292038 292040, overlap 292017 292033 AACGCGATATCAAAA CGATCGTCG-CGCCGCCGGCGGAGCT TGTCG AGCCCCGCCGGCGGCTTCTACGA-CG AAGGTCATGCCGCCT TERM 215 292082 - 292033 - R 100 -22.2 -3.16202 | gap 1, opp_overlap 292038 292040, overlap 292017 292030 GCGATATCAAAACGA TCGTCG-CGCCGCCGGCGGAGCT TGTCG AGCCCCGCCGGCGGCTTCTACGA CGAAGGTCATGCCGC TERM 216 292040 - 292074 + r 100 -25 -3.28791 | opp_overlap 292033 292030, overlap 292038 CAAAACGATCGTCGC GCCGCCGGCGGAGCTT GTC GAGCCCCGCCGGCGGC TTCTACGACGAAGGT RPD_0253 293276 - 292089 - | beta-lactamase TERM 217 292728 - 292701 - G 71 -12.6 -3.34517 | overlap 292687 292699 ATCGTCGCGCAAATA GGCGTCGAGCCG CTCG CCGCTCGCCGCC TCGACCACCCGGCCG RPD_0254 293543 - 293869 + | hypothetical protein RPD_0255 294048 - 295541 + | succinic semialdehyde dehydrogenase TERM 218 295563 - 295606 + T 74 -11.6 -3.49232 | overlap 295562 295564 CGACGCTTGTTCGAC CGTCATCCTGAGATGCGCGC TCTT GCGCGCCTCGAAGGATGGCA TGTTCTCTTTACACG TERM 219 295564 - 295605 + T 78 -15.1 -2.69057 | overlap 295563 295562 GACGCTTGTTCGACC GTCATCCTGAGATGCGCGC TCTT GCGCGCCTCGAAGGATGGC ATGTTCTCTTTACAC RPD_0256 296390 - 295704 - | hypothetical protein RPD_0257 297378 - 296392 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 220 296886 - 296847 - G 71 -14.9 -2.62184 | GCGCGTGGTACACCA CCGGCACCCGCGAGGCG TCGAGC CGCCTCGCGATCGCCTG ACCGATCCGGCCCAT RPD_0258 298202 - 297378 - | binding-protein-dependent transport systems inner membrane component RPD_0259 299011 - 298199 - | ABC transporter related RPD_0260 300143 - 299022 - | perplasmic binding protein of ABC transporter TERM 221 300727 - 300760 + G 78 -10.2 -4.15044 | gap 1 CGATGCTGGCCGTCA CCA-CCGGCTGGGCG CGATT CGGCCTGCCGGATGG TTTGTTCGCGGACGA RPD_0261 300297 - 301109 + | creatininase RPD_0262 302822 - 301191 - | ferredoxin-dependent glutamate synthase TERM 222 303671 - 303647 - g 72 -13.5 -3.14344 | opp_overlap 303652 303660 GAGCTGCTGCACGAA CACGACCGCGC GTT GCGCGACCGCG GATTGTCGGGCGCGA RPD_0263 303023 - 304009 + | hypothetical protein TERM 223 304792 - 304777 - g 75 -11.8 -3.65046 | opp_overlap 304773 GTTCCAGGTCAACAA CGCCGC GATC GCGGCG TCGCTGTTCGCGCTG RPD_0264 304010 - 305326 + | FolC bifunctional protein RPD_0265 305411 - 306409 + | zinc-binding alcohol dehydrogenase RPD_0266 306675 - 306439 - | hypothetical protein TERM 224 307082 - 307109 + H 100 -14.8 -4.4261 | opp_overlap 307077, overlap 307083 TCGAAAACGATCAGC GGCCTCGCGCGC CTGC GCGCGTGAGGCA TTTTAGTCTTCGCGC TERM 225 307083 - 307108 + H 91 -18.3 -3.25084 | opp_overlap 307077, overlap 307082 CGAAAACGATCAGCG GCCTCGCGCGC CTGC GCGCGTGAGGC ATTTTAGTCTTCGCG TERM 226 307111 - 307144 + H 86 -8.1 -4.67011 | opp_overlap 307077, overlap 307116 GCGCGCGTGAGGCAT TTTAGTCTTCGCGCG GCAT CGCGCGAAGGTTGCG TTTTTCCGTGGACTT TERM 227 307116 - 307139 + H 83 -14.6 -3.46102 | overlap 307111 CGTGAGGCATTTTAG TCTTCGCGCG GCAT CGCGCGAAGG TTGCGTTTTTCCGTG TERM 228 307636 - 307662 + H 71 -13.7 -2.53263 | gap 1 CTGAGCTACGGGACC GGCCGGCCGCGG CGCG CCGCGGC-GGTC TGGATTCCCCATAGC TERM 229 307872 - 307890 + H 75 -11.6 -3.62597 | opp_overlap 307883 GCCCTATCTGACTCT CGTCGGCG AAA CGCCGCCG TTGTTGCGGCGTAGC RPD_0267 307917 - 308537 + | hypothetical protein RPD_0268 308588 - 308866 + | transglycosylase-associated protein TERM 230 308995 - 309027 + T 78 -14.9 -3.05384 | opp_overlap 309000, overlap 309000 CGCGATCGCTCACCC ACAAACGGCCCGG CTGATCA CCGGGCCGTTTGC TTGGGTCCGGACACG TERM 231 309000 - 309022 + T 86 -13.4 -3.93288 | opp_overlap 309000, overlap 308995 TCGCTCACCCACAAA CGGCCCGG CTGATCA CCGGGCCG TTTGCTTGGGTCCGG TERM 232 309022 - 309000 - T 86 -14.1 -3.91897 | opp_overlap 309000 308995 TCGCTCACCCACAAA CGGCCCGGC TGATC ACCGGGCCG TTTGCTTGGGTCCGG RPD_0269 309830 - 309048 - | short-chain dehydrogenase/reductase SDR TERM 233 309936 - 309904 - H 83 -15.5 -3.15579 | opp_overlap 309933 CGAAGCCGCGAGCAA GCCGGCTAAGCCCGC TCT GCGGAATAAGCCGGC ACGCACACCATGCTG TERM 234 310448 - 310481 + G 70 -10.9 -3.53012 | gap 1, opp_overlap 310437 CACACTCGGCCCCGA CGGCACGCTGTCCGGC CGC GCCCG-CGGCGTTCCG TTTGCGCGGGACGCG TERM 235 310625 - 310675 + G 79 -11.9 -3.80573 | opp_overlap 310625 310626 CGTGACCTTCGACAA GGTGTCGCCGTTGAAGCTC-GCGGC GGC GCCGCAGGGCTTCGATG-CGACCGC TTTGCTGCTGATCGG RPD_0270 310089 - 311156 + | acyl-CoA dehydrogenase-like TERM 236 311538 - 311562 + G 70 -10.6 -3.51329 | opp_overlap 311532 311529 CATCAAGATGGACAT CCTGCCGCGG ATCTG CCGCGGCGAG TTGTGCTTCGCGATC TERM 237 311937 - 311955 + G 74 -10.2 -3.86524 | CGAACTCGCCTTCGA GCGCTCCG GGC CGGAACGC TTTCTCGAGACCTAT RPD_0271 311182 - 312342 + | acyl-CoA dehydrogenase-like TERM 238 312446 - 312401 - f 82 -2.8 -5.18726 | gap 3, overlap 312402 312405 312439 GCGTCAGAACAAAAA GTCAGAGC-T--CCGGTTCTGAT CCG ATCAGAACCGGAAAAGCTCCAAG GCGCGGCGCGTTCGC TERM 239 312761 - 312729 - g 83 -15.6 -3.57561 | opp_overlap 312725 CCGCAAGCGGCGAAA GGCGATCCGGCCGA CAGCC TCGGCCAGATCGGC CACCTCTACTACGAG TERM 240 312839 - 312803 - g 72 -11.6 -3.61398 | gap 2 CTTCCGCGCCAAGAA GCCGATCG--TCGCCGCG GTG CACGGCGCTGCGATCGGC GGCGGGCTCGGCCTC RPD_0272 312486 - 313292 + | enoyl-CoA hydratase/isomerase TERM 241 313300 - 313351 + T 88 -14.4 -3.81146 | gap 1, overlap 313301 GGCGCTAACTTCACT GGGTCGTCATTCCGGG-GCACGCGC GCA GCGCGTGAACCCGGAATGACGGGGG TTGTTAGTTGGAGAG TERM 242 313301 - 313350 + T 90 -17.9 -2.88366 | gap 1, overlap 313300 GCGCTAACTTCACTG GGTCGTCATTCCGGG-GCACGCGC GCA GCGCGTGAACCCGGAATGACGGGG GTTGTTAGTTGGAGA RPD_0273 314119 - 313355 - | hypothetical protein RPD_0274 314910 - 314122 - | enoyl-CoA hydratase TERM 243 315044 - 315102 + r 71 -8.8 -3.89131 | opp_overlap 315044 315045, overlap 315013 315044 TGCTTCAGATGTAAA CCG--GGGTCCCGGTTCTGCGGAGCGGCAC TTC GTGCCGCACCGC-GC-CCGGGACACAGCGC TTTGCTACTTCTTCA TERM 244 315044 - 315101 + r 77 -14.8 -2.92756 | gap 3, opp_overlap 315044 315045, overlap 315013 315044 TGCTTCAGATGTAAA C-CGGGGTCCCGGTTCTGCGGAGCGGCAC TTC GTGCCGCACCGC-GC-CCGGGACACAGCG CTTTGCTACTTCTTC TERM 245 315100 - 315044 - R 88 -15 -3.70902 | gap 2, opp_overlap 315013 315044 315044, overlap 315045 TGCTTCAGATGTAAA CCGGGGTCCCGGTTCTGCGGAGCGGCAC TTC GTGCCGCACCGC-GC-CCGGGACACAGC GCTTTGCTACTTCTT TERM 246 315099 - 315045 - R 86 -18.5 -2.82327 | gap 2, opp_overlap 315013 315044 315044, overlap 315044 GCTTCAGATGTAAAC CGGGGTCCCGGTTCTGCGGAGCGGCAC TTC GTGCCGCACCGC-GC-CCGGGACACAG CGCTTTGCTACTTCT RPD_0275 316312 - 315107 - | putative ureA/short-chain amide ABC transporter TERM 247 315713 - 315696 - G 75 -2.7 -4.81685 | opp_overlap 315696 AGGAACGAGGAAAAA TCCGA GGTGTTGA TCGGA TGTTTGACGTTGCCC TERM 248 316064 - 316079 + g 70 -10.4 -3.66018 | ATCGCGCGCGATGTT GGCGGA GAGA TCCGCC TTGTTGAGATGATCG TERM 249 316374 - 316405 + H 86 -12.3 -4.1899 | overlap 316364 CGTGGTGCGATCATG CCGCATCGTCTGC GCAGCG GCAAGCGATGCGG TTTTCCGTCGAGTGG TERM 250 316835 - 316847 + G 77 -10.5 -3.92324 | CGCCGGACCGTTATG GCCGG CAG CCGGC TTTCGTCTTCACCGA TERM 251 317041 - 317025 - g 100 -11.5 -4.58395 | opp_overlap 317024, overlap 317035 TTCAGCCCTCAAAAA CGCCGGA AAT CCCGGCG ATATCATGTCCCGGG RPD_0276 316528 - 317322 + | nuclease (SNase-like) RPD_0277 317343 - 318836 + | peptidase M48, Ste24p TERM 252 318981 - 318962 - T 100 -16.4 -5.26316 | opp_overlap 318962 318959 318958 TGAGGCCACAAAAAA GGCCCGGC TCGC GCCGGGCC TGAATTGTTCAACAG TERM 253 318962 - 318981 + T 80 -16.4 -2.6563 | opp_overlap 318962, overlap 318959 318958 TGAGGCCACAAAAAA GGCCCGGC TCGC GCCGGGCC TGAATTGTTCAACAG RPD_0278 320333 - 319035 - | transcription factor CarD RPD_0279 320804 - 320466 - | 4Fe-4S ferredoxin, iron-sulfur binding RPD_0280 321148 - 320879 - | RNA-binding S4 RPD_0281 324547 - 321188 - | helicase-like TERM 254 324861 - 324879 + r 100 -6.6 -5.58179 | TGGTCGCTCGCCTGA GGTCTCGC GGC GCTGGACC TTTTTTGTTCTGATA RPD_0282 325856 - 324975 - | hypothetical protein TERM 255 326468 - 326444 - g 70 -8.4 -3.95324 | opp_overlap 326442 326438 326445, overlap 326445 GATCGCCAAGAAGAA GGCGGGCGAG CCGGC CGCGGCCGCC AGCTGATTCTTTTCA rpmB 326169 - 326474 + | 50S ribosomal protein L28 TERM 256 326501 - 326526 + F 76 -12.5 -3.51232 | opp_overlap 326503, overlap 326499 326503 ACTCGACATTGATCG AACGGCCGGGT CCAC GCCCGGCCGTA TTCGTTTGCGCGCGG TERM 257 326503 - 326524 + F 84 -15.1 -3.33151 | opp_overlap 326503, overlap 326501 326499 TCGACATTGATCGAA CGGCCGGGT CCAC GCCCGGCCG TATTCGTTTGCGCGC TERM 258 326524 - 326503 - f 78 -14.4 -3.09015 | opp_overlap 326501 326499 326503 TCGACATTGATCGAA CGGCCGGG TCCACG CCCGGCCG TATTCGTTTGCGCGC TERM 259 326544 - 326578 + F 82 -3.6 -5.19212 | overlap 326545 CGTTTGCGCGCGGCG TTAGATCGTGATCTTT TCC GAAGATCGCTATCCAG TTTTTTCGTGGTCAT RPD_0284 326692 - 330009 + | multi-sensor hybrid histidine kinase RPD_0285 331176 - 330097 - | hypothetical protein RPD_0286 333068 - 331173 - | cobalt chelatase, pCobT subunit TERM 260 331473 - 331500 + g 71 -12.8 -3.29144 | gap 1 CATCATCAGGATCTT GC-GCTGTTCGGA GCG TCCGAGCAGCCGC TTGTGCGCCCAGTCC RPD_0287 334218 - 333223 - | cobalt chelatase, pCobS small subunit TERM 261 333357 - 333373 + g 71 -12.3 -3.28924 | ACGCGAAGCCGATGT CGCCGAA GAT TTCGGCG TTCTCCGACCAGGTG TERM 262 334704 - 334740 + r 88 -17.2 -3.08798 | gap 1 GATCGGCGCGCTCGC GGCGGCGGCCGGCGCCG TGCT CGGCGACGGC-GCGGCC TATTGGCTCGGGCAT RPD_0290 335534 - 334887 - | heat shock protein DnaJ-like RPD_0291 335604 - 335909 + | BolA-like protein RPD_0292 337273 - 335951 - | hypothetical protein RPD_0293 338436 - 337288 - | 3-dehydroquinate synthase TERM 263 338088 - 338071 - G 77 -10.5 -3.90588 | GATCGCCGAAGCAAA GCCGGCG AGAT CGCCGAC CACGCCGCCGCCGAG RPD_0294 339047 - 338433 - | shikimate kinase RPD_0295 339225 - 339371 + | hypothetical protein TERM 264 339466 - 339493 + G 70 -13.4 -3.01712 | gap 1, overlap 339475 CGAGCCCGCCAACCG GGAGACCGCGCCG CTG CGGC-CGGCCTCC TATTCGGACGCAGGG RPD_0296 339389 - 340444 + | tyrosine recombinase XerD RPD_0297 340595 - 341569 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha RPD_0298 341987 - 343450 + | hypothetical protein TERM 265 343589 - 343633 + T 79 -11.3 -3.92075 | opp_overlap 343597 CTCGCGAGTCCAGGG GTTATAGATTCCGGGCTCGCG CTA CGCGCGCCCGGAATGACGAAC TTTATGGCTGCGAGT TERM 266 343625 - 343597 - T 93 -20.3 -2.87931 | opp_overlap 343589 TCCAGGGGTTATAGA TTCCGGGCTCGCG CTA CGCGCGCCCGGAA TGACGAACTTTATGG RPD_0299 346684 - 343844 - | preprotein translocase subunit SecA TERM 267 346092 - 346077 - G 70 -6.1 -4.1711 | opp_overlap 346077 ACGATGGCGAAGAAA TGGCC GCGCTG GGCCA TGTCCTCGAGCCGGT TERM 268 347883 - 347869 - g 74 -12.8 -3.48924 | CGAGCGGCTAGACAA GCCGGC CGA GCCGGC GGCGGCCCCCGCCGA RPD_0300 347027 - 347944 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 269 347970 - 347996 + T 86 -18.1 -2.52676 | opp_overlap 347958, overlap 347973 AGACCTGAGTGGTTT CAATGGCCGGG CTTGT CCCGGCCATTG TGCGTTCAGGACCTC TERM 270 347973 - 347993 + T 79 -14 -3.41878 | opp_overlap 347958, overlap 347970 CCTGAGTGGTTTCAA TGGCCGGG CTTGT CCCGGCCA TTGTGCGTTCAGGAC RPD_0301 349207 - 348152 - | acyltransferase 3 TERM 271 348741 - 348761 + g 81 -16.1 -3.14132 | opp_overlap 348736 GCCCAGATCAGCAGC GGCGGCGCG CGC CGCGTCGCC TTGGTGACGACGAAG TERM 272 349593 - 349544 - g 74 -2 -4.72272 | gap 3, overlap 349546 349549 GCTCGGGACCAAAAA GATCATCATGCTGGAGC-CGCGGCG GAT CGCGGCGCGCGCCAGC--GCCGAAC GGATGGCGAAGACAT TERM 273 349948 - 349921 - g 81 -14.8 -3.53012 | opp_overlap 349917 CCCCCGTGGTCGAAA GCCTCGGCCGGG CGTT CCCGGTCGAGAC CCGCTATCTCGGCCG TERM 274 350339 - 350388 + G 83 -15 -3.73402 | GGTGCGGGCCTCGCG CGCCGCGGTCGATCAGCGCC-GCG GCCG CGCCGGC-CGGATCGAGCCCGGCG TTTGCTACCGGCTGT RPD_0302 349371 - 351848 + | ATP-dependent helicase HrpB TERM 275 351938 - 351897 - f 70 -10 -3.63744 | gap 1, opp_overlap 351934, overlap 351895 351898 CTTTTGGTCAAAATA GCCGGGCGCGAAGGCTGCG TCGGT CGCAGCCCGCGCGGGCG-C GTGGTCCAATCGTGC RPD_0303 351980 - 352492 + | hypothetical protein RPD_0304 353367 - 352495 - | hypothetical protein TERM 276 353464 - 353434 - R 100 -20.6 -5.50723 | opp_overlap 353427 353434, overlap 353413 GCATCAAAACAAAAA GCTGCGGCTCTGAT GCG ATCAGAACCGCAGC TTCGTCGATTTATCG TERM 277 353434 - 353464 + r 93 -18.4 -3.26546 | opp_overlap 353413 353434, overlap 353427 GCATCAAAACAAAAA GCTGCGGCTCTGAT GCG ATCAGAACCGCAGC TTCGTCGATTTATCG RPD_0305 354239 - 353514 - | acetoacetyl-CoA reductase TERM 278 354326 - 354300 - R 72 -2.2 -4.73613 | overlap 354302 TCATCACGAATAAAA TCTGCCCGTCGT CGA ACATCAAGCAAA AACGCCCGGCAATCT TERM 279 354349 - 354329 - R 100 -18.3 -4.92777 | opp_overlap 354329 AACATCAAGCAAAAA CGCCCGGCA ATC TGCCGGGCG TTTGAACATTCGGTG TERM 280 354329 - 354349 + r 100 -18.3 -3.61268 | opp_overlap 354329 AACATCAAGCAAAAA CGCCCGGCA ATC TGCCGGGCG TTTGAACATTCGGTG RPD_0306 355595 - 354417 - | acetyl-CoA acetyltransferase TERM 281 355845 - 355865 + H 75 -11.8 -3.57418 | overlap 355855 GCATTGCGTCTCAGC CCCGCCGT CGGGA GCGGCGGG TTCCTTTCCTCCATG RPD_0307 355878 - 356486 + | polyhydroxyalkanoate synthesis repressor PhaR RPD_0308 358239 - 356488 - | GGDEF domain-containing protein RPD_0309 358341 - 358739 + | hypothetical protein RPD_0310 359406 - 358756 - | hypothetical protein TERM 282 359625 - 359651 + r 76 -9.4 -3.99374 | overlap 359628 CGAACGCCTGAGGCC GAACGTCTGAGT CTG GCTCAGGCGTCC TTCTTCTTGATCACC rpmF 359824 - 359642 - | 50S ribosomal protein L32 mtgA 360705 - 360016 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 283 361019 - 361043 + G 77 -10.6 -3.87815 | CCGCTACGCGACGCT CGGCGGCGGC AAGCG GCTGCGGCCG TTTCTCGCGGTGGAA TERM 284 361706 - 361762 + G 73 -10.6 -3.72576 | gap 2 TTTGCTGGTGCGCGC CGACGAGGCGCTCGCGCCGTTCGGCGCC AAG GGCGACGTACTCCGCGC-CGCCGCG-CG TTTCGTCGCCGAGCG RPD_0313 360822 - 361787 + | polyprenyl synthetase RPD_0314 361795 - 362481 + | hypothetical protein TERM 285 363922 - 363877 - g 73 -6.2 -4.4261 | gap 3, opp_overlap 363883, overlap 363878 363880 CGCCGAACACGAAAA CGAGATCGCGGCGCGGCGCGA GGCGTTG TCG-GCCGCGCT-CG-CCTCG CTCGATGCGATGACC RPD_0315 362564 - 364216 + | Na+/H+ antiporter RPD_0316 365580 - 364246 - | ferric reductase-like transmembrane component-like TERM 286 365080 - 365061 - G 72 -13.6 -3.10531 | opp_overlap 365060, overlap 365059 365057 365055 CCAAAACCAGATAGA CCATCGGC ATCA GCCGATGG GTCTTGAAGAAGTAC ispG 367105 - 365780 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 287 366814 - 366848 + g 86 -17.8 -3.04144 | GGCCGAGCTTGCGGA GGCCGTCGCGGATGTG CGG CACGGCTGCGGCGGCC TCTTCGCGGTCGACG TERM 288 367081 - 367093 + g 77 -3.3 -4.87786 | GCTTGTTCATGGCGT CCGGA ATA TCAGG TTTTTGTGACATTCA RPD_0318 368049 - 367135 - | hypothetical protein RPD_0319 368670 - 368182 - | zinc uptake regulator ZUR TERM 289 368857 - 368814 - R 76 -13.9 -3.14931 | opp_overlap 368818 368845, overlap 368826 CGCATGCCGGATCAA GCTCGGC-AATGACGGCGCGC GGCA GCGCGCCGCCCCTCGCCGA-C GAAGCGCTTAGTTCA TERM 290 368845 - 368826 - R 81 -16.4 -2.71681 | opp_overlap 368818, overlap 368814 CAAGCTCGGCAATGA CGGCGCGC GGCA GCGCGCCG CCCCTCGCCGACGAA RPD_0320 370073 - 368865 - | beta-ketoadipyl CoA thiolase RPD_0321 370238 - 373009 + | DNA mismatch repair protein RPD_0322 374597 - 373035 - | Acetyl-CoA hydrolase TERM 291 373805 - 373824 + g 86 -9.2 -4.63527 | ACTGCAGCGGCAGCA GGTTCGGC GGCA GCCGACCC TTTTTCACCTCGTGG TERM 292 374541 - 374523 - G 70 -11.6 -3.37344 | opp_overlap 374519 374519 GCCGGAGGGAATCAA CGCGGCGG CAT CGGCCGCG GTCATGATTCTCGAG TERM 293 375221 - 375198 - R 93 -13.9 -4.24123 | opp_overlap 375198 CCAATAACTCGAAAA CCTCCGGCA GGGCAT TGCCGGAGG TTTCTTGGAGGTATT TERM 294 375198 - 375221 + r 100 -14.6 -4.17958 | opp_overlap 375198 CCAATAACTCGAAAA CCTCCGGCAG GGCA TTGCCGGAGG TTTCTTGGAGGTATT TERM 295 375498 - 375477 - R 100 -18.7 -5.47159 | opp_overlap 375477 CGTCAAGACAAAAAA CCCCGGCGG TCGC CCGCCGGGG TTTTCGAGATGCGCT TERM 296 375477 - 375498 + r 100 -18.7 -4.11394 | opp_overlap 375477 CGTCAAGACAAAAAA CCCCGGCGG TCGC CCGCCGGGG TTTTCGAGATGCGCT RPD_0323 376999 - 375533 - | putative Omp2b porin RPD_0324 377484 - 377993 + | regulatory protein, MarR TERM 297 378094 - 378052 - T 100 -20.8 -4.27117 | opp_overlap 378053, overlap 378053 378056 GCGTCAGAACAGAAA GTTAGAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTCTAGA GCATGATCCCGAAAA TERM 298 378093 - 378053 - T 100 -24.3 -3.15788 | opp_overlap 378053, overlap 378052 378056 CGTCAGAACAGAAAG TTAGAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTCTAG AGCATGATCCCGAAA TERM 299 378090 - 378056 - T 100 -26 -2.77298 | opp_overlap 378053, overlap 378053 378052 CAGAACAGAAAGTTA GAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTC TAGAGCATGATCCCG RPD_0325 379013 - 378222 - | hypothetical protein TERM 300 379818 - 379843 + G 83 -8.9 -4.59773 | gap 1, overlap 379822 CCTATGCGGTCATCG CCGCCGCGGCGC TCG GGGCCGCG-TGG TTTTTCCAACTGGCG RPD_0326 379721 - 380266 + | hypothetical protein RPD_0327 380435 - 381637 + | histidine kinase, dimerisation/phosphoacceptor RPD_0328 381649 - 382092 + | response regulator receiver TERM 301 382313 - 382298 - g 70 -11.8 -3.4252 | GGCGATTCAGGAGAA CCCGCG ATTT CGCGGG CCGGCGAACAGTCAG RPD_0329 382089 - 382913 + | PRC-barrel TERM 302 382905 - 382959 + T 85 -14.5 -3.59087 | gap 2, opp_overlap 382892 382908, overlap 382905 382908 382953 GACGCGCTCTTCGAG CA--ACCCTAGAGCGGGATGACTAATC TTC GAATCGTCATCCCGCTCTCGGGTCATG TTTGAGCATGATCTT TERM 303 382905 - 382957 + T 88 -16.3 -3.36991 | opp_overlap 382892 382908, overlap 382905 382908 382953 GACGCGCTCTTCGAG CAACCCTAGAGCGGGATGACTAATC TTC GAATCGTCATCCCGCTCTCGGGTCA TGTTTGAGCATGATC TERM 304 382908 - 382954 + T 100 -22.4 -2.84801 | opp_overlap 382892 382908, overlap 382905 382905 382953 GCGCTCTTCGAGCAA CCCTAGAGCGGGATGACTAATC TTC GAATCGTCATCCCGCTCTCGGG TCATGTTTGAGCATG TERM 305 382954 - 382908 - T 100 -22.4 -3.14132 | opp_overlap 382908 382905 382905 382953, overlap 382892 GCGCTCTTCGAGCAA CCCTAGAGCGGGATGACTAATC TTC GAATCGTCATCCCGCTCTCGGG TCATGTTTGAGCATG RPD_0330 384146 - 383067 - | putative ammonia monooxygenase TERM 306 383543 - 383519 - G 70 -11.3 -3.52113 | overlap 383521 CCGGAAAATTGATAA GACGCAGCAGC AGC GCCGCCGCGAC CGCGACCGCGACAAC TERM 307 383541 - 383521 - G 71 -12.5 -3.32984 | overlap 383519 GGAAAATTGATAAGA CGCAGCAGC AGC GCCGCCGCG ACCGCGACCGCGACA TERM 308 384203 - 384226 + H 74 -12.4 -3.45118 | opp_overlap 384191 384192 CAACGCGCCCCGCTA TACCGCCGGC GCGG GCCGACGGTA TTGGTTGTGAGCTAA TERM 309 384760 - 384738 - g 77 -11.2 -3.78234 | ATGGAAAGCCAACAA GGCCGCCAAC ACC ACCGGCGGCC TGAAATGGATCCAGA RPD_0331 384313 - 384822 + | hypothetical protein TERM 310 384917 - 384882 - f 76 -12.5 -3.53224 | overlap 384884 CAGGCTTGTCTGAAA CACCCCATGCGTGCG GCTTCA CGCACGCCCGGGGTC ACAGATGATCGCAAG TERM 311 384915 - 384884 - f 84 -15.1 -3.34398 | overlap 384882 GGCTTGTCTGAAACA CCCCATGCGTGCG GCTTCA CGCACGCCCGGGG TCACAGATGATCGCA RPD_0332 384922 - 385305 + | LrgA TERM 312 385286 - 385316 + F 72 -7.4 -4.24204 | overlap 385309 CGGCGCGACTGCTGT CGATGTGGAGCTCG CGA TGAGCGCCACCCCG TTTTCGCTGTGGGTC RPD_0333 385302 - 386024 + | LrgB-like protein RPD_0334 386266 - 386733 + | hypothetical protein RPD_0335 387850 - 386777 - | phospholipase/carboxylesterase TERM 313 387980 - 387922 - R 88 -14.5 -3.72576 | gap 1, opp_overlap 387934, overlap 387926 387927 GCCCTCCCGATCAAA GCAACCCCGCAGCATGACGCCGCGCGAC AATC GTCGCGCGGCGTCAGG-TGTTGGACCGA TGCGTCGAATTCGAA TERM 314 387976 - 387926 - R 100 -18.3 -3.56704 | gap 1, opp_overlap 387934, overlap 387922 387927 TCCCGATCAAAGCAA CCCCGCAGCATGACGCCGCGCGAC AATC GTCGCGCGGCGTCAGG-TGTTGGA CCGATGCGTCGAATT TERM 315 387975 - 387927 - R 90 -19.6 -2.73701 | gap 1, opp_overlap 387934, overlap 387926 387922 CCCGATCAAAGCAAC CCCGCAGCATGACGCCGCGCGAC AATC GTCGCGCGGCGTCAGG-TGTTGG ACCGATGCGTCGAAT TERM 316 387934 - 387969 + r 100 -24.8 -3.02511 | opp_overlap 387927 387926 387922 AAAGCAACCCCGCAG CATGACGCCGCGCGAC AATC GTCGCGCGGCGTCAGG TGTTGGACCGATGCG RPD_0336 389698 - 388007 - | chemotaxis sensory transducer TERM 317 389942 - 389992 + r 100 -19.1 -3.54424 | gap 1, opp_overlap 389947 389950, overlap 389952 GGCCAGGCGCGGTCC GACAACAGCATGACGCCGCGCGAC AATC GTCGCGCGGCGTCATG-TGTCGGA TTTGAAGCGATGACG TERM 318 389987 - 389947 - R 100 -26.4 -3.28712 | gap 1, opp_overlap 389942 389952, overlap 389950 GGCGCGGTCCGACAA CAGCATGACGCCGCGCGAC AATC GTCGCGCGGCGTCATG-TG TCGGATTTGAAGCGA TERM 319 389985 - 389950 - R 100 -29.2 -2.52623 | opp_overlap 389942 389952, overlap 389947 GCGGTCCGACAACAG CATGACGCCGCGCGAC AATC GTCGCGCGGCGTCATG TGTCGGATTTGAAGC TERM 320 389952 - 389983 + r 100 -26 -2.9348 | opp_overlap 389950 389947, overlap 389942 GGTCCGACAACAGCA TGACGCCGCGCGAC AATC GTCGCGCGGCGTCA TGTGTCGGATTTGAA RPD_0337 391701 - 390010 - | chemotaxis sensory transducer TERM 321 392012 - 392070 + H 71 -13.1 -3.04398 | overlap 392013 392051 392052 CAACCCTGACGGGCA CTGCGACGATCGGCGGAG-CGATCGACCG ATT CGAACGTTTGGCTCCGCCGA-CGTCGCGC GTTTTCGCGCGAAGC TERM 322 392166 - 392210 + H 76 -10.1 -3.94877 | gap 1, opp_overlap 392182 CAGAACCGGGAATGC GCTGGAGCAGGACGAACGAT CTTCGA ATCGT-CGTGCTGCTCGGGC TTGTTGTTCGAGCAT RPD_0338 392283 - 393380 + | hypothetical protein RPD_0339 394186 - 393530 - | anti-sigma factor ChrR, putative RPD_0340 394770 - 394183 - | RNA polymerase sigma factor RpoE TERM 323 395071 - 395042 - g 100 -15 -5.40072 | gap 1, opp_overlap 395064, overlap 395044 CCGCGCCGAAAAAAA GCCGCCGACGCCG ATCGA CGGCGCCG-CGGC GTCGATCACGCACCG RPD_0341 395002 - 395274 + | hypothetical protein TERM 324 395529 - 395481 - T 89 -13.1 -4.16943 | gap 1, opp_overlap 395462, overlap 395485 GCGGACATGCGAAAA CCAACGCCGCATGTGCCGCGCC CTATCT GGCGCGGCAGATCTGGCGC-GG ATCGTGGCGGACCAT TERM 325 395526 - 395485 - T 90 -15.8 -3.68767 | opp_overlap 395462, overlap 395481 ACATGCGAAAACCAA CGCCGCATGTGCCGCGCC CTATCT GGCGCGGCAGATCTGGCG CGGATCGTGGCGGAC RPD_0342 396153 - 395596 - | HNH endonuclease TERM 326 396474 - 396511 + G 72 -13.9 -3.0127 | opp_overlap 396469 396468 396495, overlap 396469 ATCGATCAAGTCCAG CGCGGCCGCGCCCGCCC AACA GCCCGGCCGCGGCCGGG TCTATGATTCGATCG TERM 327 397403 - 397348 - g 81 -14.7 -3.5774 | opp_overlap 397347 397359 397401, overlap 397359 ATCGAACTCGGCAAA CGCCCGGAAAACGCCGGCAAGACCA TCGTGG CGATCGTGCCGTCGTTCTCGGAGCG CTATCTGTCGACCGC RPD_0343 396439 - 397437 + | cysteine synthase A TERM 328 397593 - 397644 + T 79 -8.6 -4.26076 | gap 1, opp_overlap 397595, overlap 397596 397597 397620 CGGTTGGAGGTGATG AAGGCTCGTCATTCCGGA-CGCCGC GCA GCGGCGATCCGGAATCTCGCGGTTG TTTTGCTCGGACTGA TERM 329 397596 - 397641 + T 95 -12.5 -4.25256 | gap 1, opp_overlap 397595, overlap 397593 397597 397620 TTGGAGGTGATGAAG GCTCGTCATTCCGGA-CGCCGC GCA GCGGCGATCCGGAATCTCGCGG TTGTTTTGCTCGGAC TERM 330 397597 - 397640 + T 86 -16 -3.14672 | gap 1, opp_overlap 397595, overlap 397596 397593 397620 TGGAGGTGATGAAGG CTCGTCATTCCGGA-CGCCGC GCA GCGGCGATCCGGAATCTCGCG GTTGTTTTGCTCGGA RPD_0344 399184 - 397736 - | glycogen/starch synthases, ADP-glucose type glgC 400455 - 399181 - | glucose-1-phosphate adenylyltransferase RPD_0346 403072 - 400757 - | oxidoreductase alpha (molybdopterin) subunit TERM 331 403313 - 403287 - R 100 -15.1 -5.64274 | opp_overlap 403287 CCATGCACAAAAAAA CGCCGCGACCC TTTAG GGGTTGCGGCG TTTTTGTGTGTTTGA TERM 332 403287 - 403313 + r 100 -18 -5.14985 | opp_overlap 403287 CCATGCACAAAAAAA CGCCGCGACCCT TTA GGGGTTGCGGCG TTTTTGTGTGTTTGA TERM 333 404659 - 404672 + r 81 -4.5 -5.06816 | GTCATCTTGCGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT TERM 334 406262 - 406209 - R 100 -22.7 -3.28791 | overlap 406216 406223 ACCTTCTCTTGATAA CCGGAAATCCAAAATCTCGCTGTCC TTGC GGACAACAAGACCTTGGAGTTCCGG CTATCGAAGGTGGGT TERM 335 406255 - 406216 - R 90 -15.2 -3.69354 | overlap 406209 406223 CTTGATAACCGGAAA TCCAAAATCTCGCTGTCC TTGC GGACAACAAGACCTTGGA GTTCCGGCTATCGAA TERM 336 406248 - 406223 - R 85 -10.5 -4.35926 | overlap 406216 406209 ACCGGAAATCCAAAA TCTCGCTGTCC TTGC GGACAACAAGA CCTTGGAGTTCCGGC TERM 337 406717 - 406686 - R 84 -8.7 -4.40804 | overlap 406687 406688 406709 TACGATGTCAGAAAA CCCGCGGACCTTC ATTGAA GAAGGTCGGCGAA TACAAGTCTCGCGGA TERM 338 409363 - 409350 - R 71 -9.5 -3.71517 | GAACAGGGAAGACAA CGGGC AGGC GCCCG CGCCGGAAGCACCCG RPD_0347 410614 - 409676 - | PfkB TERM 339 409897 - 409845 - G 93 -11.2 -4.37092 | overlap 409847 ATCGCGCCCAGAAAA CTGTCGCCGGCGCCGACGGT GGAGACCTGATTG ACCGGCAGCGCCGGCGAGCG CAGCGCCAAGTCTTT TERM 340 410686 - 410713 + r 71 -12.7 -3.07443 | opp_overlap 410684, overlap 410688 CGGGGCGAGCGAATG CGGCCGGCTGT ATCGAA GCAGCCGGCTG TTGGGTCAAGTCTGA RPD_0348 411650 - 410826 - | hypothetical protein TERM 341 412038 - 412020 - g 91 -16 -3.95022 | CCGAGGAACAGGAAA GCGACGCG CAC CGCGTCGC ATGGGCGGCGGTGAA RPD_0349 411884 - 412120 + | ChaB RPD_0350 414354 - 412315 - | carbamoyl-phosphate synthase L chain, ATP-binding RPD_0351 415961 - 414354 - | propionyl-CoA carboxylase RPD_0352 416791 - 416057 - | short-chain dehydrogenase/reductase SDR RPD_0353 418610 - 417000 - | AMP-dependent synthetase and ligase RPD_0354 419438 - 418647 - | enoyl-CoA hydratase/isomerase RPD_0355 420262 - 419471 - | short-chain dehydrogenase/reductase SDR RPD_0356 421437 - 420259 - | isovaleryl-CoA dehydrogenase TERM 342 421049 - 421017 - G 70 -10.5 -3.66874 | GCAACTTCATCGAAA CGACGTCGGAACCCG CGC CCGCCTCCGACATCG CAAGAGCGCCGACAT TERM 343 421514 - 421500 - R 70 -10 -3.59979 | opp_overlap 421488 GCCCGCCAGCCCAAA CTGCCA ATC TGGCAG CTCGGCAGTCGTCGT RPD_0357 422846 - 421620 - | extracellular ligand-binding receptor TERM 344 423463 - 423437 - g 77 -10.8 -3.86346 | opp_overlap 423440 423442 423443, overlap 423440 423443 TCACGCGCGGACAAA CAGGAACGAACG CGG CGCGCGCTCCTG CAAGCCGCGATCGAT TERM 345 423476 - 423443 - g 72 -11.6 -3.50335 | opp_overlap 423443 423442 423440, overlap 423437 423440 GCGGACAAACAGGAA CGAACGCGGCGCGC GCTCCT GCAAGCCGCGATCG ATATTGTGGGCGATG TERM 346 423664 - 423684 + G 71 -9 -3.76781 | gap 1, overlap 423678 CGAGTCCCTAACGGG CGTCGCGCG TGAC CGCGC-ACG TTTCGTCGCCTATTT RPD_0358 423299 - 424021 + | regulatory protein, TetR TERM 347 425819 - 425768 - g 72 -8.4 -4.13767 | overlap 425772 425773 GCCCGCATTTCAAAA CCAAGGCCAGCCAGCTCCGCCCGG ACGC CCGCGCCGCGCTGACGGATCTGGG CCGGCAGGCGCTGCA RPD_0359 424666 - 425946 + | pseudouridine synthase RluD TERM 348 426709 - 426695 - g 71 -12.8 -3.2794 | overlap 426696 CGTGATCGACATGAA CCGCCG CCT CGGCGG CGACGCGTCGCTCAA RPD_0360 426165 - 427064 + | RNA polymerase factor sigma-32 TERM 349 427100 - 427120 + T 100 -15.4 -4.93365 | opp_overlap 427092 TGACAAACGATGATG CCCCGCCG CGACC CGGCGGGG TTTTTCGTTGTGACA RPD_0361 427559 - 427197 - | hypothetical protein RPD_0362 428594 - 427695 - | beta-lactamase-like RPD_0363 428704 - 429039 + | regulatory protein, ArsR RPD_0364 429057 - 429875 + | hypothetical protein TERM 350 429887 - 429906 + T 88 -16.4 -3.37493 | opp_overlap 429887 CTGACGAATCAAAAA GGGCGGCC TTGC GGCCGCCC TTGGTATCTTCGCGC TERM 351 429906 - 429887 - T 100 -16.4 -4.90266 | opp_overlap 429887 CTGACGAATCAAAAA GGGCGGCC TTGC GGCCGCCC TTGGTATCTTCGCGC RPD_0365 431549 - 429936 - | phosphoenolpyruvate carboxykinase TERM 352 430218 - 430239 + g 71 -12.3 -3.34715 | gap 1, overlap 430217 430224 GCGGGTCACCTTGAT CGGCATCCGG TGG CCGG-TGCCG TATTTGCCGCCGGTC RPD_0366 432473 - 431739 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 353 432399 - 432369 - G 85 -10.5 -4.28994 | opp_overlap 432385 GACCAGCGAGCAAAA CG-GACCACCGCTGC CCC GCAGCAG-GGTCGCG AGCGCGCCCTCTCGC RPD_0367 432687 - 433388 + | winged helix family two component transcriptional regulator TERM 354 433574 - 433612 + F 83 -4.6 -5.07486 | gap 3, overlap 433575 433576 ACGCAGGCCCGGCAG TGGCCGCGGCCGC-TCGCA TGGG TGCGACGCG-CCG-GGCAG TTTTTCTTCACGCTG TERM 355 433988 - 433959 - g 85 -9.9 -4.25104 | gap 1, opp_overlap 433957 433959 TCTCGCCGACCAAAA CGCGGGCGCGGATC TAC GA-CCGCGACGGCG TGTTGATCCTCGACA RPD_0368 433595 - 435286 + | periplasmic sensor signal transduction histidine kinase RPD_0369 435283 - 435744 + | HPr kinase RPD_0370 435884 - 436342 + | PTS system fructose subfamily IIA component RPD_0371 436339 - 436674 + | phosphotransferase system, HPr RPD_0372 438272 - 436731 - | hypothetical protein TERM 356 437672 - 437640 - G 75 -11.9 -3.65046 | CGGTGAGCCGAAGAA CCGGGCGCGCCGC GGGTCGA GCAGCGCGCCGAG CCCGAGCGCGCCGAT RPD_0373 438293 - 440227 + | GTP-binding protein LepA RPD_0374 440240 - 440926 + | hypothetical protein RPD_0375 441249 - 441485 + | hypothetical protein RPD_0376 441476 - 441811 + | hypothetical protein TERM 357 442491 - 442517 + G 71 -15.1 -2.62184 | CCGCAATGTGCTCGA CGCCGCGGGCT TCACC GGCCCGTGGCG TGATCTCGACGGCGA TERM 358 443013 - 442974 - g 81 -8.5 -4.46615 | overlap 442976 CAGGAGCAAGGAAAA GCTCGCCACCGCGCC GGGCTTCAAG GGCACGGTCGCGATC GCGTTCACGATGCCG aceK 441925 - 443745 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein RPD_0378 443977 - 444726 + | CysZ-like protein TERM 359 445552 - 445603 + G 78 -16 -3.1505 | opp_overlap 445552, overlap 445593 GGCACGTGCAGCAGA TGGGTCGCGGT-CCGGTGCTGCTG CTGATC CA-CGGCACCGGCGCGGCGACCCA TTCGTGGCGGATGCT RPD_0379 445371 - 446354 + | alpha/beta hydrolase fold TERM 360 447231 - 447273 + G 77 -5.5 -4.67982 | gap 2, overlap 447230 TCCGGTCGGCACCGG CTAC-AGC-CGCCTCGTCGCC AGC GGCGACGACGTGCGCAAGCAG TTTTATTCAGTCGAC TERM 361 448214 - 448204 - g 70 -2.4 -4.69053 | overlap 448178 GACGACGCAAGAAAA GCGC TGC GCGG CGAGGTCGGCGCGAT RPD_0380 446518 - 448239 + | peptidase S10, serine carboxypeptidase RPD_0381 449083 - 448307 - | endonuclease III TERM 362 449181 - 449197 + G 83 -2.2 -5.19212 | CTGAAGCCGCATCGC GCATTG AGTCA CAAGGC TTTTTTGGTGCTGAT TERM 363 449503 - 449530 + G 72 -5.4 -4.36914 | gap 1, overlap 449500 449514 AGCTTTATCTGGTCT CGCGCGGCCGCCG CGT CAGCG-TCGCGAG TTTTCTCGGAGCCGA TERM 364 449567 - 449553 - g 81 -4.2 -5.08601 | GGAGCCGAAGAAAAA GCTAGC TTC GCCAAC GCCTTGACCGCCGCC RPD_0382 449106 - 449621 + | hypothetical protein TERM 365 449723 - 449768 + G 74 -9.8 -3.83026 | gap 3, opp_overlap 449682, overlap 449704 CCAAGCCCGGCCCCC GCGA-CGCCGCGCT-CGCCGACT ATG ATTCGGTGCGGCGCG-CGATCGC TTTCATCTCGCAGAA TERM 366 450432 - 450390 - g 83 -14.7 -3.64487 | opp_overlap 450426, overlap 450393 GGACATCGCCAACAA GATCGCCGCGCCGAAGGCC TCGCG GGCGGTGGGCGCGGCGGTC GGCAAGAACCCGATC TERM 367 450429 - 450393 - g 71 -15 -2.63549 | opp_overlap 450426, overlap 450390 CATCGCCAACAAGAT CGCCGCGCCGAAGGCC TCGCG GGCGGTGGGCGCGGCG GTCGGCAAGAACCCG RPD_0383 449638 - 450570 + | methylated-DNA--protein-cysteine methyltransferase RPD_0384 450661 - 452175 + | phosphoglyceromutase RPD_0385 453031 - 452216 - | dihydrodipicolinate reductase RPD_0386 453435 - 453124 - | hypothetical protein RPD_0387 454162 - 453455 - | orotidine 5'-phosphate decarboxylase RPD_0388 454750 - 454169 - | NADPH-dependent FMN reductase TERM 368 454694 - 454668 - G 71 -14.5 -2.52464 | gap 1, opp_overlap 454668 GCGCGGGCCAATTCA TGTGCGGC-GGC GGCC GCCAGCCGCACA TTATGCGAGCCGGTG TERM 369 454668 - 454694 + g 78 -14.5 -3.28924 | gap 1, opp_overlap 454668 GCGCGGGCCAATTCA TGTGCGGC-GGC GGCC GCCAGCCGCACA TTATGCGAGCCGGTG RPD_0389 455501 - 454899 - | putative phospholipid N-methyltransferase RPD_0390 456755 - 455595 - | chaperone DnaJ TERM 370 456490 - 456469 - G 91 -12.9 -4.2231 | opp_overlap 456485 456486, overlap 456456 456459 456470 AACGACGACGCAAAA CCGGCGCCG AAGC CGGCGCCGC CGCCCATGCCCTGCT TERM 371 456489 - 456470 - G 81 -16.4 -3.12663 | opp_overlap 456485 456486, overlap 456456 456459 456469 ACGACGACGCAAAAC CGGCGCCG AAGC CGGCGCCG CCGCCCATGCCCTGC RPD_0391 458765 - 456864 - | molecular chaperone DnaK TERM 372 457177 - 457200 + g 70 -10.2 -3.65812 | gap 1 TCGGCATGGTTCTTG GCGTCCACCGC TTC GCGGCGG-CGC TTGTCTTCGGAGGCG TERM 373 458966 - 458977 + H 70 -7.2 -4.07568 | overlap 458964 GCGTCGACGACCGGC CGGC CGCC GCCG TTTTGCAGCACGGAA RPD_0392 459160 - 460104 + | hypothetical protein RPD_0393 460841 - 460221 - | GrpE protein TERM 374 460773 - 460818 + g 72 -4.8 -4.4715 | gap 2, opp_overlap 460778 460781, overlap 460783 CATGATGTACGGCTT GGA-AACCACC-GGATCGGCTG GCTG CGCCTGATCCTGGTTGTTGTCC TTTTGTCCGTTGGAA hrcA 462029 - 460941 - | heat-inducible transcription repressor TERM 375 461150 - 461184 + g 83 -12.7 -4.06491 | opp_overlap 461130 GCACGCCCTCGGCGC GCTCGGCGCGGCCGA GCAGA TCGACCACGCCGCGC TTTGTCTCGAGTTCG TERM 376 461247 - 461207 - G 79 -16.1 -3.02144 | overlap 461210 CGAGTTCGTCGAACA GCAGCCGCACTCGCTCGAG GTC CTCGAGCGCGTGCAGATCC TCCAGCAGATTGGCG TERM 377 461244 - 461210 - G 77 -16.4 -2.73875 | overlap 461207 GTTCGTCGAACAGCA GCCGCACTCGCTCGAG GTC CTCGAGCGCGTGCAGA TCCTCCAGCAGATTG rph 462181 - 462894 + | ribonuclease PH TERM 378 463135 - 463155 + G 78 -10.3 -4.08692 | opp_overlap 463120 GGCCGAAGCCGCGGC GCAGGCGGC AAA GCTGCCGGC TTTTGCCGACGATTC TERM 379 463178 - 463208 + G 81 -3.9 -5.00884 | gap 1, overlap 463169 463168 GACGATTCCGGCCTG TCCGTGGATGCGCT CGAC GGCGCG-CCGGGGA TTTTTTCGGCACGCT RPD_0396 462947 - 463579 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 380 464597 - 464619 + G 72 -13.4 -3.21276 | overlap 464596 GCTGGCCGGCCGCTC GCTCGATCCG TCG CGGATCGCGC TGTTGTGCGCGGAAG RPD_0397 463569 - 464726 + | coproporphyrinogen III oxidase TERM 381 464731 - 464771 + T 100 -11.8 -5.02476 | gap 1, overlap 464733 464735 TGGCGGCTTGAGTTT GTCATTCCGGG-GCGCGCC GGAA GGCGCGAACCCGGAATCTC TTTTTTCCAGCATAT TERM 382 464733 - 464769 + T 89 -13 -4.13963 | gap 1, overlap 464731 464735 GCGGCTTGAGTTTGT CATTCCGGG-GCGCGCC GGAA GGCGCGAACCCGGAATC TCTTTTTTCCAGCAT TERM 383 464735 - 464767 + T 86 -15.6 -3.66166 | gap 1, overlap 464733 464731 GGCTTGAGTTTGTCA TTCCGGG-GCGCGCC GGAA GGCGCGAACCCGGAA TCTCTTTTTTCCAGC RPD_0398 466035 - 464836 - | extracellular ligand-binding receptor TERM 384 465035 - 464998 - G 74 -7.5 -4.2558 | overlap 464999 CACGTCGGAGGAAAA CCGTCGCGTCGCTTGCG TGCG CGCCAGCGCGGCGACCA GCGCCACCGCGTCGT TERM 385 466662 - 466717 + G 85 -5.4 -5.06414 | overlap 466663 ATGTCGTCGCGCTGC CCGG-CGCTTCCGCGGTGCTGGCC-GCG CTGG CGCTGGCC-GCACTGCCG-ACCGACCGC TTTTTCTTCGACGGC RPD_0399 466232 - 467185 + | hypothetical protein TERM 386 467241 - 467263 + G 76 -6.1 -4.46212 | overlap 467242 TTTCAGACCGGGATC TCCGCCGAG ACGCG CGCGGCGGC TTTTCTGATGGCGAA RPD_0400 467172 - 467567 + | hypothetical protein RPD_0401 467651 - 468592 + | glutathione synthetase RPD_0402 468696 - 469424 + | regulatory protein, LuxR RPD_0403 469502 - 470158 + | autoinducer (acylhomoserine lactone) synthase RPD_0404 470155 - 470379 + | hypothetical protein TERM 387 471156 - 471102 - g 78 -14.4 -3.53091 | gap 3, opp_overlap 471097 471096 471102 AGCGCGCGTTGGAAA TCGCCGCCG-CGGGCG-GCC-ATCATC TGTT GATGGTCGGCTCGCCCGGCGCCGGCAA GTCGATGCTGGCGGC RPD_0405 470489 - 472027 + | Mg chelatase-related protein RPD_0406 472132 - 472617 + | hypothetical protein TERM 388 472964 - 472987 + G 78 -16 -3.16683 | opp_overlap 472961 CCGTTCAGAGCATGC GGCTGCGCTG GATG CGGCGCAGCC TTCATGCGGTGGCGT TERM 389 474575 - 474602 + G 70 -4 -4.46212 | gap 1 TCGCGGAGGATCGCG CCG-CCTGTCTGG CAG CCGGAATGGACGG TTTTCTCGTCAAGCC RPD_0407 472732 - 474684 + | ATP-binding region, ATPase-like TERM 390 475101 - 475086 - g 72 -11.8 -3.5764 | AAGCCGATCGCGAAA CCGGCG CTGA CGCCGG CGACGCTGGGCCGGC RPD_0408 474891 - 475904 + | hypothetical protein RPD_0409 476994 - 476038 - | pantothenate kinase hisE 477508 - 477185 - | phosphoribosyl-ATP pyrophosphatase RPD_0411 478331 - 477564 - | imidazole glycerol phosphate synthase subunit HisF TERM 391 477684 - 477647 - G 73 -6.2 -4.35524 | gap 1 CGCCGAAATGGAAAA TCGAGGCGGCCAGCACC GCGGT GGCG-TGGCCTTCCCGA ATGCCGTCGACCAGA RPD_0412 479076 - 478339 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 479905 - 479255 - | imidazole glycerol phosphate synthase subunit HisH TERM 392 479289 - 479307 + g 75 -6.7 -4.38712 | gap 1, opp_overlap 479287, overlap 479287 479285 AAATTCGAGATCAGC GCCAG-GC CGAA GCGCTGGC TTTTCTCGGGGTGAA RPD_0414 480420 - 479902 - | hypothetical protein RPD_0415 481042 - 480449 - | imidazoleglycerol-phosphate dehydratase RPD_0416 481225 - 481806 + | ATP-dependent protease peptidase subunit TERM 393 482178 - 482199 + G 72 -11.5 -3.53444 | overlap 482174 ATCGTCACCGACCCG TCGCCCGGC AATG GCCGCGCGA TTCGTTGTTACGAAA TERM 394 482231 - 482217 - g 77 -3.5 -4.72272 | gap 1, overlap 482218 482219 CGTTGTTACGAAAAA GCCGGC TTTC GCCG-C GACCGCGTGGTCGAC RPD_0417 481803 - 482288 + | GCN5-related N-acetyltransferase TERM 395 482486 - 482515 + G 73 -14.3 -3.15544 | gap 1, opp_overlap 482475 AAGACCGAGATCGCG CGGCG-GCTGGCGA AGC TTGCCGGCGCGCCG TTCCTGAAGGTCGAG hslU 482285 - 483586 + | ATP-dependent protease ATP-binding subunit TERM 396 483670 - 483628 - T 86 -15.5 -3.5394 | overlap 483633 AAAGCGCTCCCCAAA TCATAGCGTCATCGCCCGG AATGA CCGGGCGATGACGCGCCGG GATGTCGATGTGCCG TERM 397 483665 - 483633 - T 100 -25 -3.00525 | overlap 483628 GCTCCCCAAATCATA GCGTCATCGCCCGG AATGA CCGGGCGATGACGC GCCGGGATGTCGATG RPD_0419 484287 - 483691 - | Smr protein/MutS2 RPD_0420 485768 - 484290 - | MltA TERM 398 484687 - 484669 - G 100 -16 -4.32857 | GCGCCGAAATACAAA TCGGCCCG CGC CGGGCCGA TGATCGCCGAACCGG RPD_0421 486531 - 485824 - | import inner membrane translocase, subunit Tim44 TERM 399 486001 - 486040 + g 73 -12.2 -3.35679 | gap 2, overlap 486035 486036 CTTCACCGTGAGCTG GGCGGTG-TGCTCG-CGC ACTTCG GCGCCGAGCAGCTCCGCC TTGTCGATCGCAACG RPD_0422 486979 - 487455 + | preprotein translocase subunit SecB TERM 400 487520 - 487491 - T 83 -9.2 -4.33248 | opp_overlap 487491 487489 487492, overlap 487492 487493 GAATTTGACAATAAA GGCCGGCGCC GCCTGGATCA GGCGCCGGCG GGATATTCCTTCCAG TERM 401 487519 - 487492 - T 73 -12.7 -3.19226 | opp_overlap 487491 487489 487492, overlap 487491 487493 AATTTGACAATAAAG GCCGGCGCC GCCTGGATCA GGCGCCGGC GGGATATTCCTTCCA TERM 402 487521 - 487493 - T 76 -15.9 -2.50813 | opp_overlap 487492 487491 487489, overlap 487492 487491 ATTTGACAATAAAGG CCGGCGCCGCCTG GAT CAGGCGCCGGCGG GATATTCCTTCCAGA RPD_0423 488203 - 487508 - | DNA polymerase III, epsilon subunit TERM 403 488031 - 488001 - G 72 -8.4 -4.15222 | overlap 487976 488019 ACCTGCGCGAACAAA GGCTTGTCGGC-GA GAAAT TCGGCCGACA-GCC CATGCACCGCGAAGG coaE 488842 - 488243 - | dephospho-CoA kinase TERM 404 488540 - 488510 - G 84 -13.2 -3.9461 | GGTCTCGAACAACAA CGGCACGTCGACCA CCG CGATCGGCGCGCCG GAGGCCTCGGCATCG TERM 405 488860 - 488904 + r 73 -8.7 -4.08958 | gap 1, overlap 488861 488864 CGCTTCCTCCACTTC CCAGGAGCAGGATGACTGAT CGTCGA ATC-GTCATCCTGCTCTAGC TTGTTGTTTGAGCGT TERM 406 488864 - 488900 + r 75 -14.7 -2.7369 | gap 1, overlap 488861 488860 TCCTCCACTTCCCAG GAGCAGGATGACTGAT CGTCGA ATC-GTCATCCTGCTC TAGCTTGTTGTTTGA RPD_0425 489577 - 488969 - | Maf-like protein RPD_0426 490413 - 489574 - | hypothetical protein TERM 407 490481 - 490496 + H 85 -6 -5.06414 | overlap 490483 GTCGCGGCCGCCGCG GGCGGG ATAA CCCGGC TTTTTCTTCACAGGC RPD_0427 490867 - 491307 + | hypothetical protein TERM 408 491751 - 491739 - g 72 -5.5 -4.41348 | opp_overlap 491746 491750, overlap 491722 491740 491748 TGTCGGCGAAAGAAA CCGAC ATC ATCGG CGAAGGCGTCGTCGA rho 491591 - 492856 + | transcription termination factor Rho TERM 409 492906 - 492885 - f 74 -14.4 -2.63079 | opp_overlap 492885, overlap 492882 492881 GGTGCAGACAAGCGA GGGCGCCC GGGTCG GGGCGCCC TTTTTTGTGAGCTGC TERM 410 492885 - 492906 + F 100 -14.4 -5.26316 | opp_overlap 492885 492882 492881 GGTGCAGACAAGCGA GGGCGCCC GGGTCG GGGCGCCC TTTTTTGTGAGCTGC trmE 492960 - 494348 + | tRNA modification GTPase TrmE TERM 411 495710 - 495742 + G 72 -14.7 -2.70932 | opp_overlap 495685 495706 495707, overlap 495737 GCTATGAAGAAGCCG CGGCGCAGGGGCTGG TGG CCGGCCTCAACGCCG TGCTTGCGGCCGGCG RPD_0430 494578 - 496458 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA RPD_0431 497049 - 497750 + | methyltransferase GidB RPD_0432 497747 - 498601 + | cobyrinic acid a,c-diamide synthase TERM 412 499646 - 499632 - g 100 -11.4 -4.56597 | overlap 499607 CTGGCGCTGGAAAAA CGCGTC AGC GACGCG CTCGGCATGAAGGTC RPD_0433 498870 - 499760 + | parB-like partition proteins TERM 413 499736 - 499756 + T 70 -10.3 -3.58329 | opp_overlap 499735 499732, overlap 499733 GCTCGACGACATCAT CCGCCGGCT CGA GGCGGGCGG TTAGTTGTTCCTTCG TERM 414 500012 - 500054 + T 100 -25.2 -4.27117 | opp_overlap 500013, overlap 500013 CTACGGATGATAACA ATTAGAGCTCCGGTTCTGAT AGA ATCAGAACCGGAGCTCTAAC TTTCTGTTCTGACGC TERM 415 500013 - 500053 + T 100 -28.7 -3.15788 | opp_overlap 500013, overlap 500012 TACGGATGATAACAA TTAGAGCTCCGGTTCTGAT AGA ATCAGAACCGGAGCTCTAA CTTTCTGTTCTGACG TERM 416 500053 - 500013 - T 100 -28.7 -3.8512 | opp_overlap 500013 500012 TACGGATGATAACAA TTAGAGCTCCGGTTCTGAT AGA ATCAGAACCGGAGCTCTAA CTTTCTGTTCTGACG holA 501141 - 500113 - | DNA polymerase III subunit delta RPD_0435 501749 - 501189 - | hypothetical protein leuS 504372 - 501736 - | leucyl-tRNA synthetase TERM 417 503689 - 503725 + g 73 -12.9 -3.28712 | opp_overlap 503660 CACCAGCAGGCCTTC GGAGCGGCCGATCCAGT TGC GCTGCATCAGCCGCACC TTGTCGGGCCAGCGG RPD_0437 506261 - 504585 - | GGDEF domain-containing protein TERM 418 506653 - 506631 - g 88 -16.3 -3.67864 | opp_overlap 506636 GAAGCCAAGGCCAAA TGGCCGGCG CTGGT CGCCGGCCA TCCCGGCACCGAGCT RPD_0438 506433 - 507098 + | hypothetical protein RPD_0439 507714 - 507145 - | hypothetical protein RPD_0440 507883 - 508569 + | winged helix family two component transcriptional regulator TERM 419 508828 - 508851 + G 73 -15.2 -2.94099 | GACGTGCTGTTCTCC GCCGGCGACG CCTC CGACGCCGGC TATGTGGTGCAGACC RPD_0441 508696 - 509142 + | cyclic nucleotide-binding RPD_0442 510451 - 509393 - | exodeoxyribonuclease III TERM 420 510492 - 510468 - R 76 -8.5 -4.1347 | CGCGAAGCAGACAAA GCTCAGTCCGC GAA GCAGACAAAGC ACAAAATGAAGGAGC RPD_0443 511455 - 510508 - | outer membrane lipoprotein carrier protein LolA RPD_0444 513944 - 511473 - | cell divisionFtsK/SpoIIIE RPD_0445 515191 - 513953 - | aminotransferase, class I and II TERM 421 514761 - 514720 - G 81 -16.5 -3.13403 | gap 1, overlap 514718 TGGTCGGCAGGAACA CCGCCT-CGCAGCCGGCGGC GCG GGCGCCGGCCGCATAGGCCG GATAGAACGGATTTG TERM 422 515215 - 515199 - H 72 -2.2 -4.69027 | AAAGCCATTCAAAAA CGCC AGTTTTAAG GGCG CCCGGCCGCTATGCG RPD_0446 515319 - 515588 + | transcriptional regulator AbrB TERM 423 515795 - 515814 + G 73 -9.2 -3.9461 | TTGGCATTGTGGTCG CGCCGATC CCTC GCTCGGCG TTATTCTTGGCCGGA RPD_0447 515593 - 516000 + | PilT protein-like TERM 424 516145 - 516111 - T 100 -14.3 -4.56775 | gap 1, overlap 516113 516115 ACGCCCCGGCAAAAA GAC-AGGGGCCCCAGC TTGC GCTGGGACCCCTCGAC GGTCCGGACATTGCC TERM 425 516142 - 516113 - T 91 -15.7 -3.90048 | overlap 516111 516115 GCCCCGGCAAAAAGA CAGGGGCCCCAGC TTGC GCTGGGACCCCTC GACGGTCCGGACATT TERM 426 516140 - 516115 - T 100 -18.3 -3.53855 | overlap 516113 516111 CCCGGCAAAAAGACA GGGGCCCCAGC TTGC GCTGGGACCCC TCGACGGTCCGGACA RPD_0448 517674 - 516232 - | ammonium transporter RPD_0449 518053 - 517715 - | nitrogen regulatory protein P-II TERM 427 518074 - 518094 + r 82 -14.7 -3.27022 | TTATCCCCGCTAAGG GCCCGGCCA AAC TGGCTGGGC TTGATCTCGACTGAA TERM 428 518336 - 518301 - R 78 -4.6 -4.80882 | overlap 518302 518303 AGGTCAGATCAAAAA GCGAGCACGACAGGGT ACGA ACACAATCGTGCTCAG GAGGCGGGCAGTGCC RPD_0450 518691 - 518377 - | hypothetical protein TERM 429 518780 - 518758 - R 73 -11.3 -3.61398 | gap 1 GGCGGGGGCCAACAA GCGCTC-GCG CTCG CGCCGAGCGC CGGAAGGATGAAGCC TERM 430 518874 - 518919 + r 71 -5.7 -4.27117 | gap 3, opp_overlap 518901, overlap 518863 518880 CGCCCCGGCACCGCC GCTAGAGCGTTTCCGGTTCTGA CAGAA TCAGAACCGG--A-GCTCTAAC TTTCTGTTCTGACGC RPD_0451 519338 - 519000 - | nitrogen regulatory protein P-II RPD_0452 520496 - 519615 - | acyl-CoA thioesterase II TERM 431 520586 - 520567 - H 85 -3.4 -5.26119 | opp_overlap 520571, overlap 520568 CGCGCAAAAACAAAA TCCAGGGC TCCG GCTCTGGT TGGAACGGAGGCTCT RPD_0453 520635 - 521954 + | 2-octaprenyl-6-methoxyphenyl hydroxylase RPD_0454 522372 - 522175 - | hypothetical protein RPD_0455 523140 - 522466 - | peptidase S16, lon-like RPD_0456 524190 - 523270 - | thioredoxin RPD_0457 525583 - 524645 - | LysR, substrate-binding RPD_0458 525665 - 526414 + | hypothetical protein TERM 432 526433 - 526451 + T 95 -13.1 -4.25074 | opp_overlap 526433 ACCCGACAAAAAAAA GCCCGCG GCGAG CGCGGGC TTTTGGGATTTGATC TERM 433 526451 - 526433 - T 100 -13.1 -5.94713 | opp_overlap 526433 ACCCGACAAAAAAAA GCCCGCG GCGAG CGCGGGC TTTTGGGATTTGATC TERM 434 526480 - 526516 + T 79 -9.4 -4.18018 | gap 1, overlap 526479 TCGAGGTCTGCTCGT TGC-CTGCGCCCCGTTC TGTC GAACGAGGCGCAGCGGG TTTTGCGTCAGGCGC RPD_0459 527306 - 526524 - | histidine kinase, HAMP region TERM 435 527960 - 528000 + H 91 -11.8 -4.25104 | gap 1, opp_overlap 527989 CATCATCGCGCCTGT CGCCCCGGCGTGGCCGC CCCCTTAA GCGATCGC-CCGGGGCG TTTTGATCCAGAGCA RPD_0460 528003 - 528995 + | AppA/PpaA family photosynthesis gene regulator TERM 436 529444 - 529473 + G 91 -12.9 -4.27584 | TGATGTCGATGCCGA TGCTCGGCGCC CGGCTGAA GGCGCTGAGCA TTTTCGGTTACGGCT RPD_0461 529350 - 530435 + | hypothetical protein TERM 437 530569 - 530524 - T 84 -4.2 -5.18726 | gap 3, opp_overlap 530530, overlap 530528 530562 GCGTCAGAACAAAAA GTCAGAGC-T--CCGGTTCTGAT AGA ATCAGAACCGGAAAAGCTCTTGC GGCCGCTGAAGCTCA TERM 438 530597 - 530562 - T 100 -16.2 -4.22338 | gap 1, opp_overlap 530530, overlap 530528 530524 ATCAGAACCGGAAAA GCTCTTGCGGCCGCTGA AGC TCAGCGGCCGCC-GAAC GCCCGCAACGCCGCC RPD_0462 531880 - 530582 - | ribulose-bisphosphate carboxylase TERM 439 530766 - 530754 - G 71 -9.1 -3.87149 | GGCACGAAACCGAAA TCGGC GCA GCCGA CCTTGCGATACACCG TERM 440 531451 - 531399 - G 88 -16.4 -3.64822 | gap 2, overlap 531386 ATCGGCCGATCGAAA GCCTTCAGCCGTTCGCGCAATCCGGC GAC GCCGAATTGCGGGC-CGGC-AAAGGC GGCCAGATAGCTGTC RPD_0463 532454 - 532026 - | hypothetical protein TERM 441 532663 - 532690 + H 70 -7.6 -4.08767 | gap 1 TTGATCTGGTTCAGC CGGCGTCG-GCGG CAA CCGCGCGGCCCTG TTTTGCCGAAATCCA RPD_0464 532736 - 534718 + | acyltransferase 3 RPD_0465 535989 - 534811 - | alginate o-acetyltransferase AlgJ TERM 442 535546 - 535536 - G 79 -2.4 -5.07275 | CGACATAGAGAAAAA TCGC TCC GCGG TCGCGGTAGTAGGCT RPD_0466 537404 - 535992 - | membrane bound O-acyl transferase, MBOAT RPD_0467 539666 - 537900 - | HemY-like TERM 443 538499 - 538532 + g 74 -12.3 -3.59262 | gap 1 ACATCGCATCCGGCA GCGCGCGCACCGCGCG CAG CGTCCAG-GCGCGCGC TTTCGCGGTGTCGCC TERM 444 538670 - 538641 - G 75 -9.1 -4.07568 | opp_overlap 538630, overlap 538642 GCGCGCGCGCGAAAA TTCGCCGGCGTCG ATCC CGGCGCGGGCGAT CGCCAGCGCGCTTTC TERM 445 539307 - 539349 + g 85 -17.8 -2.70932 | gap 2 CGCCTGCAGTAGCAG CGCCAGCGGATCGTGCGGCG CGTGC CGCCGCGCGG-C-GCTGGCG TGGTTGCGCGCCGCC TERM 446 539416 - 539448 + g 90 -19.1 -3.15544 | GTGATGGCGTGGCGG GCCCGGCCGCTGCGA CGT TCGAAGCGGCCGCGC TTCATCCGGCTCGGC RPD_0468 541113 - 539674 - | hypothetical protein TERM 447 540764 - 540804 + g 78 -15.4 -3.21194 | overlap 540765 GCCGCGACGATGCCT GGC-CGGCGCGGCTCGGCGG CGG CCGCAGA-CCGCGCCGCGGC TTCCTCGGCTTTGTC TERM 448 540765 - 540813 + g 73 -9.4 -3.91144 | overlap 540764 CCGCGACGATGCCTG GCCGGCGCGGCT-CGGCGGCGGCC GCA GACCGC-GCCGCGGCTTCCTCGGC TTTGTCCGATGTGGA TERM 449 541045 - 541069 + g 88 -10 -4.3129 | gap 1, opp_overlap 541048, overlap 541043 ATCACTTGCGCCAAC GGACGCCGCGT TCTC GCGCGG-GTCC TTTTCGTGCTGCGTA RPD_0469 541917 - 541174 - | uroporphyrinogen III synthase HEM4 TERM 450 542148 - 542193 + G 70 -10.9 -3.48924 | gap 1, opp_overlap 542138 542149, overlap 542149 ACAACCTGCGATGAA ACC-GCCGCCGCCGTGGTCGAG CGC CGCGCCGACGGCAGCGGCCGGA TTCTCTCCAACATCG TERM 451 542191 - 542149 - g 91 -16.8 -3.737 | opp_overlap 542149 542148, overlap 542138 CAACCTGCGATGAAA CCGCCGCCGCCGTGGTCGAG CGC CGCGCCGACGGCAGCGGCCG GATTCTCTCCAACAT TERM 452 542933 - 542971 + G 78 -13.9 -3.53811 | gap 1, opp_overlap 542954 542957 GAAGGCGCTGGTCGC GGCCGGCGGGGTCGCC GCAAATCA GGCGATCC-GCCGGTC TTTGCGGGAGGTCGC RPD_0470 542016 - 543185 + | O-sialoglycoprotein endopeptidase gpsA 543222 - 544211 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 453 544361 - 544350 - g 72 -7.2 -4.2461 | opp_overlap 544350 ATCGCGATGAAGAAA GGCG ACCG CGCC TTCTTCTATCACTCC RPD_0472 544215 - 544628 + | hypothetical protein TERM 454 545226 - 545258 + G 74 -5.5 -4.52589 | gap 1 TGGCCGCGCCCCATG TGGCGCCGGCCCAG ACCGTG CTCG-CCGGCGACA TTTTCTATCAGAGCG RPD_0473 544799 - 545476 + | hypothetical protein RPD_0474 545958 - 547910 + | acetyl-CoA synthetase TERM 455 547915 - 547901 - f 71 -11.4 -3.49756 | overlap 547892 GAACAAGCACCACAA GGCGGT CTG ACCGCC ATTGCGACAGCGCCC TERM 456 547926 - 547952 + F 100 -21.6 -4.19735 | CCGCCATTGCGACAG CGCCCTGCCTCC TTC GGGGGCAGGGCG TTTCGTTTTGCGGAG RPD_0475 548292 - 548819 + | ErfK/YbiS/YcfS/YnhG TERM 457 548878 - 548908 + T 71 -14.1 -2.55668 | opp_overlap 548884, overlap 548884 GATCAATCAGCTCGT AAAAAAGCCGCGC ACGAA GCGCGGCTTTTTC GTTGGTGTGACGCTG TERM 458 548884 - 548902 + T 100 -13.1 -4.91873 | opp_overlap 548884, overlap 548878 TCAGCTCGTAAAAAA GCCGCGC ACGAA GCGCGGC TTTTTCGTTGGTGTG TERM 459 548902 - 548884 - T 100 -13.1 -5.02074 | opp_overlap 548878 548884 TCAGCTCGTAAAAAA GCCGCGC ACGAA GCGCGGC TTTTTCGTTGGTGTG RPD_0476 551021 - 548928 - | OmpA/MotB TERM 460 550013 - 550039 + g 81 -12.2 -3.85698 | overlap 550016 GCGCGCCCTGCGGAC CGATCGTGCCGG GAA CCGGCGCGGTGG TTTGTCCGGCCGGCG TERM 461 550319 - 550347 + g 78 -14.5 -3.28712 | overlap 550288 GGCCGGCCGCAGGCG GGGTCGGGCGCTG GCT CGGCGCTCCACCC TTGTCGGCGGGCGCG TERM 462 550378 - 550428 + g 71 -12.3 -3.28712 | overlap 550382 AGCCTGTCGGCAGGC GCGGGCTGTCGCTGCGGCGCCGC GGCGG GCGGCGGCGTGGGGGCTGCTCCC TTGTCGGCAGCGGGC TERM 463 551277 - 551257 - R 83 -15.4 -3.18274 | GCGATCGGAAGTGAA GGCGGCGC TGCAC GCGCCGCC TCCCGCTGATCATCG RPD_0477 552052 - 551564 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 464 552164 - 552135 - R 100 -14.4 -4.11216 | gap 1, overlap 552140 552152 TCGGCAGGGCGAAAA GCAAATGGCCGGG ACAAG CCCGGCCATT-GC AACGCGAAACAATTG TERM 465 552160 - 552140 - R 93 -14 -4.20136 | overlap 552135 552152 AGGGCGAAAAGCAAA TGGCCGGG ACAAG CCCGGCCA TTGCAACGCGAAACA sdhB 552970 - 552188 - | succinate dehydrogenase iron-sulfur subunit TERM 466 553037 - 553087 + r 81 -10.3 -4.21607 | gap 1, overlap 553064 TCTCTGGTCCTTGCT CGGTCTCAGATTCCGGGTTCGCGC TTGC GCGCGC-CCCGGAATGACGGGCCG TTTGTGTTCGCTCAA sdhA 554922 - 553099 - | succinate dehydrogenase flavoprotein subunit RPD_0480 555348 - 554926 - | succinate dehydrogenase, cytochrome b subunit RPD_0481 555734 - 555345 - | succinate dehydrogenase, cytochrome b subunit RPD_0482 555966 - 557084 + | cation diffusion facilitator family transporter TERM 467 557347 - 557293 - T 78 -14.5 -3.07816 | gap 1, opp_overlap 557335 557336 GCGCCAGCGAGCGAA CCCGGAATCCCGCGGTGATGAAAC GATCGGGT GCTT-ATCAGCTCGGGATTCCGGG TTCGCGCGGTTTGCG TERM 468 557335 - 557380 + T 74 -9.6 -3.86312 | gap 1, opp_overlap 557293, overlap 557336 CGGGTGCTTATCAGC TCGGGATTCCGGGTTCGCGCG GTTTG CGCGCGC-CCCGGAATGACGC TTGTTACTTGTAGAT TERM 469 557336 - 557379 + T 70 -13.1 -2.91064 | gap 1, opp_overlap 557293, overlap 557335 GGGTGCTTATCAGCT CGGGATTCCGGGTTCGCGCG GTTTG CGCGCGC-CCCGGAATGACG CTTGTTACTTGTAGA RPD_0483 558895 - 557384 - | malonyl-CoA synthase TERM 470 557607 - 557589 - G 70 -11 -3.53091 | ACGCCTTCGCCGAAA TCGGCATG CGG CACGCCGA TCACCGCGGATTCGA RPD_0484 558984 - 559733 + | short-chain dehydrogenase/reductase SDR TERM 471 559969 - 559992 + F 84 -16 -3.05384 | TGCGATCAGCGCGCT CCCTCTCCCG CTTG CGGGGGAGGG TTGGGTGGGGGAAAC RPD_0485 560248 - 560832 + | beta-Ig-H3/fasciclin TERM 472 560906 - 560931 + F 100 -19.7 -3.78953 | opp_overlap 560921 CGCCGCCAGGCGAGG GCGCGGGCCGG GAAA CCGGCTCGCGC TTTCGTGATCGGGAT TERM 473 561605 - 561629 + G 75 -2.7 -4.77438 | overlap 561607 GCGCTACGTGCATTT CTTCGCGATGG CTT CGATCGTGGCG TTTTTGATCGTCCAT RPD_0486 561057 - 561701 + | hypothetical protein TERM 474 562090 - 562078 - g 86 -4.8 -5.18726 | GGTCGACAACAAAAA GAGC TGGAC GCTC GACGAACTCGGCGCG RPD_0487 561704 - 562483 + | twin-arginine translocation pathway signal RPD_0488 562633 - 563151 + | superoxide dismutase, copper/zinc binding TERM 475 563163 - 563211 + T 74 -14.6 -2.56806 | overlap 563162 563158 563198 GTAGGTCGACCTTCT CGCGGTCATTCCGGG-GCACGCGC AAC GCGCGTGAACCCGGAATC-CCGAG CTGTTCTGCCTTGCT TERM 476 563273 - 563240 - T 87 -17.5 -2.92463 | gap 1, opp_overlap 563198 563235 CTCATCACCTAGAGA TTCCGGGTTCGCTCGC TGC GCGAGCGC-CCCGGAA TGACATGCTCTACCG RPD_0489 564467 - 563283 - | major facilitator transporter TERM 477 563995 - 563979 - G 70 -6.5 -4.1891 | CGCCTGCAACAGAAA CGGGG TGATCAG CCCCG ACGACAGGATGCCGA TERM 478 564147 - 564106 - G 79 -13 -3.72576 | gap 1 CCGCCGGCGACGAAA GCCAGCGCCGC-GCCGATC CCGGC GATCAGCCGCGCCGCCGAC AGCAGCACGAAATTG RPD_0490 564693 - 565805 + | 3-isopropylmalate dehydrogenase TERM 479 565947 - 565928 - T 100 -15 -5.83211 | opp_overlap 565928 GAGCAAAACAAAAAA TGCCCGGC TTTG GCCGGGCA TTTTCGTAAGGGATG TERM 480 565928 - 565947 + T 100 -15 -4.2558 | opp_overlap 565928 GAGCAAAACAAAAAA TGCCCGGC TTTG GCCGGGCA TTTTCGTAAGGGATG RPD_0491 566357 - 565977 - | hypothetical protein RPD_0492 567340 - 566522 - | hypothetical protein RPD_0493 567499 - 568533 + | aspartate-semialdehyde dehydrogenase TERM 481 568540 - 568525 - f 100 -11.8 -4.45068 | opp_overlap 568525 ACCGCCAAGAAGAAA GCGGCG TAAG CGCCGC CGCTGTCGTCCGTCG TERM 482 568567 - 568596 + F 74 -14.3 -2.54896 | gap 1, opp_overlap 568576, overlap 568563 GTCGTCATCTGTAGG GTGGGCAAAGGCGC GGA GCGCCGT-GCCCAC TCGGTTGCATGGGAC TERM 483 568588 - 568576 - f 70 -10.5 -3.53811 | opp_overlap 568567 568563 TGTAGGGTGGGCAAA GGCGC GGA GCGCC GTGCCCACTCGGTTG RPD_0494 568675 - 569241 + | hypothetical protein TERM 484 569277 - 569322 + T 82 -2.8 -5.18726 | gap 3, opp_overlap 569304 569307, overlap 569278 569279 569281 AATCGGAGCGGAAGC TCTAGAGCTTTTCGGGTTCTGAT AGA ATCAGAACCCG--A-GCTCTAAC TTTTTGTTCTGACGC RPD_0495 570134 - 569490 - | carbonate dehydratase TERM 485 569642 - 569661 + g 72 -7 -4.18494 | overlap 569643 TCATCAGGTTTTCGA TGCTGCGG AATA CCGCGGCC TTTTCGATCCGGGTG TERM 486 571115 - 571102 - g 75 -9.5 -4.08216 | overlap 571103 CGAGCGCCCGGAAAA CGCCG GTCG CGGCG CGATCCAGCTCGACG RPD_0496 570335 - 571213 + | Citryl-CoA lyase TERM 487 571338 - 571296 - T 100 -29.6 -5.18726 | opp_overlap 571297 GCGTCATAACAAAAA GTTAGAGCTTCGGTTCTGAT TCA ATCAGAACCGAAGCTCTAAC CGGGACGCCGCTTTG RPD_0497 573117 - 571384 - | chemotaxis sensory transducer TERM 488 571473 - 571493 + g 80 -13.9 -3.72576 | opp_overlap 571470 571473, overlap 571480 GCGCCGACGACAGCA CCTGCGCGG AGG CCGCGCCGG TTTCCTGCGCGCCGC TERM 489 571480 - 571509 + g 73 -11.3 -3.66356 | gap 1, opp_overlap 571473 571470, overlap 571473 CGACAGCACCTGCGC GGAGGCCGCGCCGG TTT CCTGCGCG-CCGCC TTTGACGTTGGCGAT TERM 490 572518 - 572538 + g 73 -4 -4.59773 | gap 2, opp_overlap 572518 CACCATCGAATAGGA GTCGACCTGC GTT GC-GG-CGAC TTTTTCGAGCTCGGA TERM 491 573389 - 573365 - R 93 -17.9 -3.27525 | opp_overlap 573373, overlap 573360 CCTTTTGAAAGCGAA GATCGAGCCGC GCA GCGGCCCGATC GAAGTCATCAGGCCC leuD 574002 - 573397 - | isopropylmalate isomerase small subunit RPD_0499 574494 - 574093 - | hypothetical protein RPD_0500 574610 - 574948 + | hypothetical protein TERM 492 575201 - 575237 + F 72 -2.5 -4.73432 | gap 3, opp_overlap 575210, overlap 575210 575221 TCACTTGCTGAGTTA TCGAATGAA-TGC-CGTC GCAA GACGCGCAGTTCGT-CGA TTTATTTCTCTTTGC TERM 493 575379 - 575405 + F 74 -13.7 -2.86271 | opp_overlap 575363, overlap 575377 CAGCGCCAGTCGCTC TGCGGTCCGGC AACAC GCCGGAGCGCA TCATTCTGGTCGCAG RPD_0501 575449 - 575742 + | hypothetical protein TERM 494 575763 - 575784 + F 100 -17.3 -5.07486 | opp_overlap 575763 GCGATGTTCAGCAAA CAGGCCCGG TTTT CCGGGCCTG TTTTTATTCGGGCTG TERM 495 575784 - 575763 - f 100 -17.3 -3.73775 | opp_overlap 575763 GCGATGTTCAGCAAA CAGGCCCGG TTTT CCGGGCCTG TTTTTATTCGGGCTG RPD_0502 575878 - 576198 + | hypothetical protein RPD_0503 576327 - 577028 + | hypothetical protein TERM 496 577050 - 577079 + T 89 -12.9 -4.24294 | gap 1, opp_overlap 577054, overlap 577054 577056 GTGATCGTTGAAAAG CA-AACAGGCGCCC ATC GGGCGCCTGTCGTG TTTTGGCTAATTCGT TERM 497 577054 - 577074 + T 90 -18.3 -2.95081 | opp_overlap 577054, overlap 577050 577056 TCGTTGAAAAGCAAA CAGGCGCCC ATC GGGCGCCTG TCGTGTTTTGGCTAA TERM 498 577074 - 577054 - T 100 -18.3 -4.19735 | opp_overlap 577054 577050 577056 TCGTTGAAAAGCAAA CAGGCGCCC ATC GGGCGCCTG TCGTGTTTTGGCTAA TERM 499 577056 - 577072 + T 81 -15.1 -3.02187 | opp_overlap 577054, overlap 577054 577050 GTTGAAAAGCAAACA GGCGCCC ATC GGGCGCC TGTCGTGTTTTGGCT RPD_0504 578539 - 577127 - | isopropylmalate isomerase large subunit RPD_0505 579016 - 578747 - | hypothetical protein TERM 500 578962 - 578904 - G 100 -19.6 -3.51411 | gap 2, overlap 578900 ACGTGGCGAAAGCAA CCGGGGTCCCGGGTCTGCGGAGCAGCGT GAACA ACGCTGCACCGC-G-CCCGGGACACAAG CAGGAACCGACACCA TERM 501 579003 - 578985 - G 100 -13.8 -4.79223 | opp_overlap 578985, overlap 578998 CGACACCACGAAAAA GCGCGGGC AAA ACCCGCGC TTTCGCAAAGCAATG TERM 502 578985 - 579003 + g 77 -13.1 -3.53224 | opp_overlap 578985 578998 CGACACCACGAAAAA GCGCGGG CAAAA CCCGCGC TTTCGCAAAGCAATG rplS 579429 - 579034 - | 50S ribosomal protein L19 RPD_0507 580361 - 579543 - | tRNA (guanine-N1)-methyltransferase TERM 503 580442 - 580416 - R 81 -12.2 -3.85698 | opp_overlap 580402 CGTGCCCCGGACAAA GTGCAGCACGCC GAA GGCGTGGTGCGC TGCAGATCCGGGGCC TERM 504 580483 - 580541 + r 91 -18.9 -3.06831 | gap 2, opp_overlap 580484 ACACCCGAGATAGTA ACCGGGGTCCCGGATCTGCGACGCAGCAC GGC GTGCTGCATCGC-G-TCCGGGACACGGGA TTGCGTGAGGCTTAC TERM 505 580540 - 580484 - R 100 -24.6 -3.32498 | gap 2, opp_overlap 580483 CACCCGAGATAGTAA CCGGGGTCCCGGATCTGCGACGCAGCAC GGC GTGCTGCATCGC-G-TCCGGGACACGGG ATTGCGTGAGGCTTA RPD_0508 581083 - 580553 - | 16S rRNA processing protein RimM TERM 506 581111 - 581141 + r 76 -8.1 -4.16921 | TTACTTGCCGGCTTC GGCGGCCTTGCGC TCCTT GCGCGGCACCGCC TTTTCCGGGTTGTTG rpsP 581419 - 581096 - | 30S ribosomal protein S16 TERM 507 581156 - 581168 + g 70 -10.5 -3.71848 | CTTTTCCGGGTTGTT GCGCG CTT CGCGC TTCTTGATGCCGGCG TERM 508 581457 - 581510 + r 95 -18.9 -3.48395 | gap 1, opp_overlap 581486, overlap 581460 TTGTGTGTTGCTGAT CAGCTCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGAGGTG TTCTGTGCGAGAGAT TERM 509 581460 - 581507 + r 87 -19.2 -2.58822 | gap 1, opp_overlap 581486, overlap 581457 TGTGTTGCTGATCAG CTCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGAG GTGTTCTGTGCGAGA TERM 510 581538 - 581486 - R 74 -12.1 -3.53012 | gap 1, opp_overlap 581460 581457, overlap 581525 GGGGCGCGCGTGAAA CGCGCGAACCCGGAATCCCGAG GTGTTCTGTG CGAGAGATTCCGGGTTCGC-CG TTGCGCGGCGCACCG RPD_0510 583134 - 581581 - | signal recognition particle protein TERM 511 582187 - 582217 + g 73 -13.2 -3.28712 | overlap 582178 CTCGACGGCGGCGGC GGCCTTCTCGGCGT CGA GCGTCGAGGCGGCC TTCTCGACCAGCGAG TERM 512 583204 - 583184 - H 79 -9.7 -4.18018 | opp_overlap 583168, overlap 583168 583185 583200 GCCTTTGATCCAAAA CGGCCTTTC GGG GAAAGGCCT ATGACCCAGCAACGG TERM 513 583203 - 583185 - H 71 -13.2 -3.10597 | opp_overlap 583168, overlap 583168 583184 583200 CCTTTGATCCAAAAC GGCCTTTC GGG GAAAGGCC TATGACCCAGCAACG TERM 514 583275 - 583249 - H 76 -6.5 -4.4009 | gap 1, overlap 583233 583252 GCCTATGGCACAAAA CACGTTCGCGCC CGAG GGCGC-ATCGCG CTGTCGGGCGTTGAC RPD_0511 583492 - 584466 + | beta-lactamase-like RPD_0512 585215 - 584490 - | hypothetical protein RPD_0513 586018 - 585212 - | transcription activator, effector binding TERM 515 585834 - 585887 + g 72 -4.3 -4.46112 | overlap 585845 585856 GCCGATGGAGCAGGC GTGGACGGAGACGGCGTCGTCGC GGCGGGTG GCGGCGTGGTCGTCTCGGCCGGC TTTGTTTCGGTGGAC dapF 586253 - 587134 + | diaminopimelate epimerase TERM 516 588162 - 588142 - gT 70 -10.4 -3.59979 | gap 1 TTTCCGTATTCGAAA CGCC-CCGG CACG CCGGCGGCG CGGATGCCGCAGCTC TERM 517 588182 - 588233 + GT 83 -14.2 -3.53091 | gap 1 TGCCGCAGCTCGATG GCCGCATCATCCGCGAACGCGCCGC GCG GCTGCGCGC-CGCAGGCGAAGCGGC TTTGCAACGGCGCCT RPD_0516 589297 - 588401 - | pseudouridine synthase RPD_0515 587134 - 588465 + | MiaB-like tRNA modifying enzyme TERM 518 589481 - 589518 + G 70 -10.6 -3.60627 | opp_overlap 589468, overlap 589482 GATCGAGGACGTGCT GCTGCG-CGCCGACCTCG GCAC CGAGGT-GGCGTCGCGGA TTTCGGATGCGGTCG RPD_0517 589326 - 590273 + | signal recognition particle-docking protein FtsY RPD_0518 590270 - 590902 + | intracellular septation protein A TERM 519 591058 - 591088 + T 88 -16.2 -3.28712 | overlap 591059 CCGCGTCCCCGAGGG ATGGATTGCCGGGT CAA GCCCGGCAATCCAC TTGTCAGCAGGCGAG TERM 520 591059 - 591087 + T 90 -19.7 -2.57132 | overlap 591058 CGCGTCCCCGAGGGA TGGATTGCCGGGT CAA GCCCGGCAATCCA CTTGTCAGCAGGCGA TERM 521 591110 - 591164 + T 70 -7.8 -4.05714 | gap 3, opp_overlap 591118 GCAGGCGAGGGCGGT GGCCGAAAGCGAGCCGGCCCGGCG-TC AGCC GAGCGCCGAGTTGGCGCGC--TCAGCC TTTCTGCTTGGCGAT TERM 522 591158 - 591118 - T 71 -11 -3.53012 | gap 1, opp_overlap 591110 GGGCGGTGGCCGAAA GCGAGCCGGCCCGGCG-TC AGCC GAGCGCCGAGTTGGCGCGC TCAGCCTTTCTGCTT RPD_0519 591551 - 591159 - | hypothetical protein TERM 523 591365 - 591412 + g 80 -15.4 -3.30797 | gap 1, overlap 591363 591381 CCACTTTCTCGGACT TGGCGCCGGCGGTCGGCGACGTC TTG GTCGCGGCCGGCGGC-GGCGCCA TCTTGTCGGTTTGGG RPD_0520 592269 - 591670 - | periplasmic protein thiol RPD_0521 592445 - 592266 - | Heme exporter protein D (CcmD) RPD_0522 593176 - 592442 - | heme exporter protein CcmC RPD_0523 594036 - 593368 - | heme exporter protein CcmB RPD_0524 594688 - 594086 - | cytochrome c biogenesis protein CcmA TERM 524 595280 - 595255 - g 75 -9.7 -4.11216 | opp_overlap 595257 CGGCGACGCGGAAAA GATCAACCCGC TGGT GCCGGTCGATC TCGTCATCGACCACT TERM 525 595540 - 595522 - g 70 -8.8 -3.95324 | overlap 595519 CATCGGCAAGAAGAA GGGCACCT TCG AGGTGGCC TATCCGGATTCGCTG TERM 526 596051 - 596099 + G 70 -10.8 -3.54459 | gap 1, overlap 596052 GCCAGCGTGGTGCCG TCGCTGGCCGGGCCGAAGCGCCC CGAA GGCCGCGTC-GCGCTGCCGGCGG TTTCGGAAGGCTTCA RPD_0525 594905 - 597622 + | aconitate hydratase TERM 527 597785 - 597807 + F 95 -11.2 -4.54727 | opp_overlap 597785 597800 597801 GGCAGGTGAACGGAA GGCGGCCTAT GCA AAGGGCCGCC TTTTCGTTTCAAGGC RPD_0526 597793 - 598629 + | hypothetical protein TERM 528 598663 - 598644 - f 100 -13.6 -4.55128 | ATCCCCAAAGCAAAA GGACCAGC TTGC GCTGGTCC TCCGACAAACAAAAA TERM 529 598698 - 598679 - f 100 -12.2 -5.38054 | TCCGACAAACAAAAA GGACCAAC TCGC GTTGGTCC AGTATGGGGATTTGG RPD_0527 598989 - 599357 + | hypothetical protein RPD_0528 600097 - 599552 - | GCN5-related N-acetyltransferase TERM 530 599811 - 599753 - G 70 -11 -3.54741 | gap 3 GATCATCTGGCGAAA GCCGCGCGCCTC-GCATTGCGC-GATCAG CTCG CGCATCAGCGCGGTGCCGAGGC-CGCGGC GATGCGTCGCCGGAT TERM 531 600343 - 600322 - R 100 -14.4 -5.4505 | opp_overlap 600322 CGGTGCAACAAAAAA GCCCCGGC GCGAAG GCCGGGGC TTTCAAGAGCTTCAC TERM 532 600322 - 600343 + r 85 -14.4 -3.55622 | opp_overlap 600322 CGGTGCAACAAAAAA GCCCCGGC GCGAAG GCCGGGGC TTTCAAGAGCTTCAC RPD_0529 601163 - 600372 - | hypothetical protein RPD_0530 604090 - 601496 - | hypothetical protein RPD_0531 604834 - 604094 - | ABC transporter related TERM 533 605256 - 605231 - g 74 -14.7 -3.02461 | CAAGGTCCCCCAACA GGCGCTGGACG AGAT CGTCAAGCGCC TGAAGGCGCGCAACA RPD_0532 604899 - 605534 + | lipolytic enzyme, G-D-S-L RPD_0533 605725 - 606261 + | 2',5' RNA ligase TERM 534 606506 - 606475 - g 74 -12.4 -3.60151 | gap 1, opp_overlap 606475 606490 606492, overlap 606479 606490 GCTCGCAAATTACAA GCCA-CCGAAAAAGC AGA GCTTTCTCGGGCGGC TGTTCGGTGGCGGCG RPD_0534 606344 - 607525 + | AFG1-like ATPase RPD_0535 607655 - 608623 + | malate dehydrogenase TERM 535 608681 - 608630 - f 93 -18.8 -3.17723 | gap 2, overlap 608632 608635 GGACGCTGAATTTAA GACGAGCCGTGTGCGCCGCCGCTC GTCAAT GAGCGGCG-CGC-CACGGCCCAAC CGGCTGGACGCGATC TERM 536 608679 - 608632 - f 95 -20 -3.15056 | gap 2, overlap 608630 608635 ACGCTGAATTTAAGA CGAGCCGTGTGCGCCGCCGCTC GTCAAT GAGCGGCG-CGC-CACGGCCCA ACCGGCTGGACGCGA TERM 537 608676 - 608635 - f 90 -20.3 -2.77791 | gap 2, overlap 608632 608630 CTGAATTTAAGACGA GCCGTGTGCGCCGCCGCTC GTCAAT GAGCGGCG-CGC-CACGGC CCAACCGGCTGGACG sucC 608713 - 609912 + | succinyl-CoA synthetase subunit beta RPD_0537 609963 - 610196 + | CopG-like DNA-binding RPD_0538 610186 - 610605 + | PilT protein-like RPD_0539 610618 - 611502 + | succinyl-CoA synthetase, alpha subunit TERM 538 611527 - 611555 + F 90 -15.3 -3.72893 | opp_overlap 611524 TCGCCGACTGAATGC GGATCGGTAAGGC TGA GCCCTGCCGATCC TTTGGTCAGGCAATC TERM 539 611692 - 611677 - f 70 -11.8 -3.17219 | opp_overlap 611682, overlap 611667 CACAAGCCCGAGCAA GCGCGG TCAC CCGCGC ACTTGCGGGGGGCTT TERM 540 611800 - 611819 + F 88 -6.4 -5.18726 | opp_overlap 611800, overlap 611781 611794 TCCGGTTCTGATAGA GTCAGAAC CGGA GCTCTGAC TTTTTCTTCTGACGC TERM 541 612554 - 612520 - g 77 -13.5 -3.53012 | overlap 612500 612521 CGCCGCTCCCCGAAA CGGCCGCTGATGCGC TGGAC GCGCACGAGCGGCCT CGTCGAAGCGGCGCG TERM 542 612553 - 612521 - g 80 -17 -2.71712 | overlap 612500 612520 GCCGCTCCCCGAAAC GGCCGCTGATGCGC TGGAC GCGCACGAGCGGCC TCGTCGAAGCGGCGC RPD_0540 611893 - 612579 + | GCN5-related N-acetyltransferase RPD_0541 613737 - 612634 - | hypothetical protein RPD_0542 613913 - 614425 + | regulatory protein, MarR RPD_0543 614527 - 615342 + | hypothetical protein TERM 543 615661 - 615645 - f 78 -6.7 -4.57569 | GGACTTGCCGAAAAA TTGAATT CAT AATTCAA ACCTTGTCTCTTTCC TERM 544 615720 - 615742 + F 72 -12 -3.36202 | AAGGTGCACTATGTT GCTGATCCGG TAA CTGGATCGGC TTATCGCGTGTGTCT kgd 615785 - 618742 + | alpha-ketoglutarate decarboxylase TERM 545 618746 - 618774 + F 100 -18.8 -3.6279 | overlap 618735 GCGCTGCGCTGACCC CGCGGGCCGCCG CACGC CGGCGGCCGGCG TTGTTCGAGACATTT TERM 546 619306 - 619291 - g 75 -11.8 -3.64703 | overlap 619292 GGCTGTCGAGCGAAA GCGGCG TCGA CGCCGC GACCGTGCCGGGCTC RPD_0545 618849 - 620150 + | dihydrolipoamide acetyltransferase RPD_0546 620210 - 620611 + | hypothetical protein RPD_0547 620619 - 621365 + | short-chain dehydrogenase/reductase SDR TERM 547 621533 - 621554 + G 79 -7.9 -4.4648 | gap 1, overlap 621533 621534 TTGCGCGGCTCGCTG C-CGCCCGCG AAA CTCGGGCGCG TTTTGTCCTGGGCGT RPD_0548 621392 - 621646 + | hypothetical protein RPD_0549 621639 - 621929 + | hypothetical protein TERM 548 622061 - 622048 - g 70 -5.9 -4.17316 | overlap 622045 622049 AGTGGTGGAAAAGAA CGCCA CGCT CGGCG GCACCTGCCTGAATG TERM 549 622414 - 622357 - g 73 -12.9 -3.2614 | opp_overlap 622411 GACGGTCGAGACCAA GTCGATCGTGATCGCCACTG-GCTCGG ACGTGG CCAAGCTCAAGGGC-ATCGCGATCGAC GAGAAGCGCGTGGTG RPD_0550 621944 - 623347 + | dihydrolipoamide dehydrogenase RPD_0551 623344 - 623925 + | hypothetical protein TERM 550 623918 - 623949 + T 73 -8.6 -4.07568 | opp_overlap 623909, overlap 623919 GACGAATCCGCGCCG AGCGATAGCGCGCC GAGC GGCCGGCTATCGCG TTTTCGCGCGAACCG RPD_0552 624608 - 624018 - | hypothetical protein xerC 625726 - 624737 - | site-specific tyrosine recombinase XerC TERM 551 625459 - 625434 - G 78 -15.5 -3.09516 | gap 1 GCCCGCATCAGCGAA CGGC-CGGCGAT CGC ATCGCCGCGCCG CGCCGCCATGAAGGC TERM 552 626281 - 626336 + G 70 -11.8 -3.48276 | overlap 626282 GCGCATGGGCGTGCG GCT-GGTCGGCCCGCCGCCGCAGCGG ATGACG CCGGCGCGGCGGCG-GCTGATCGAGA TTCTGTCGGACGGCC TERM 553 626282 - 626335 + G 75 -15.3 -2.68823 | overlap 626281 CGCATGGGCGTGCGG CT-GGTCGGCCCGCCGCCGCAGCGG ATGACG CCGGCGCGGCGGCG-GCTGATCGAG ATTCTGTCGGACGGC TERM 554 626952 - 626906 - g 71 -12.3 -3.30474 | gap 2, overlap 626908 GCCTACAAGCAGGAA GACGGCGCGCACTACCACGCCCG CGA CATG-GCGGTGGTGCGCGC-GTC GATCGCCAGGATCCC RPD_0554 625901 - 628108 + | primosome assembly protein PriA TERM 555 628119 - 628098 - T 70 -10.2 -3.57263 | overlap 628118 ACGTCGATCCGCAAA GCTTCCTG TAGTCT CAGGAAGC CGAAGTCATACATCG TERM 556 628184 - 628151 - T 100 -13.9 -5.14563 | overlap 628155 CGCGCGACGAAAAAA TAAAGCCTGCCGTCA TGGC TGACGGCAGGCCGCA GATCGGGCGCGCGAG TERM 557 628180 - 628155 - T 100 -19.1 -5.0917 | overlap 628151 CGACGAAAAAATAAA GCCTGCCGTCA TGGC TGACGGCAGGC CGCAGATCGGGCGCG RPD_0555 628748 - 628269 - | rare lipoprotein A RPD_0556 629384 - 629944 + | F0F1 ATP synthase subunit delta TERM 558 630429 - 630375 - g 85 -17.7 -2.71681 | opp_overlap 630419 CAAGTCGGTGAACGA GCCGATGGCGACCGGCCTCAAGGCG ATCGA CGCCCTGATCCCGGTCGGCCGCGGC CAGCGCGAGCTGATC RPD_0557 629944 - 631476 + | F0F1 ATP synthase subunit alpha RPD_0558 631618 - 632493 + | F0F1 ATP synthase subunit gamma RPD_0559 632564 - 633994 + | F0F1 ATP synthase subunit beta RPD_0560 634081 - 634536 + | F0F1 ATP synthase subunit epsilon TERM 559 634633 - 634672 + T 88 -17.2 -3.05463 | gap 1 CCCCGCAAGCGGGAG AGGGAGCGCGCTGCGCTTC GAT GAAGCGCAGCGC-CTCACA TTGAATGAAGCGAAT TERM 560 634852 - 634816 - T 73 -10.9 -3.58037 | gap 1, overlap 634808 634807 634839 CACGAACCGCGCAAA GCTCCGC-GCGACTTC GCGATA GACGTCGCGGCGGAAC GGGACGACGAGGTCG RPD_0561 635307 - 634798 - | dinucleoside polyphosphate hydrolase RPD_0562 636251 - 635304 - | NAD-dependent epimerase/dehydratase TERM 561 637071 - 637042 - g 79 -7 -4.65895 | gap 1, overlap 637043 CGCCGGAGCGAAAAA TGGC-GCCGCCGG ATCGA CCGGCTGCAGCCG ATCTCGCTGCCGCAG RPD_0563 636526 - 637596 + | hypothetical protein RPD_0564 638254 - 637751 - | dinucleoside polyphosphate hydrolase TERM 562 637951 - 637966 + g 72 -11.8 -3.55444 | ACCATTTCTGGCGCT GGCCGC GGTA GCGGCC TTTCCAGGCTCGGCC RPD_0565 639624 - 638389 - | protein of unknown function DUF610, YibQ TERM 563 639447 - 639472 + g 70 -11.1 -3.61398 | TGATCATCACTTGGA CGGTCGGCTCG CCGC CGAGCGGATCG TTGTTGAACAGCGCG TERM 564 639668 - 639640 - R 72 -13.9 -2.70932 | gap 1, overlap 639655 639658 CCGTCTCCCGAATCA CCTGCCGCGACG ATACCA CGTCGCGGC-GG ACGGGCGGCACACCC TERM 565 639752 - 639733 - R 100 -12.8 -5.49809 | opp_overlap 639733 CAAAGGCCAAAAAAA GGGCGGCC CGAA AGCCGCCC TTGGTCGATGGAACC TERM 566 639733 - 639752 + r 70 -12.1 -3.18264 | opp_overlap 639733 CAAAGGCCAAAAAAA GGGCGGC CCGAAA GCCGCCC TTGGTCGATGGAACC RPD_0566 641154 - 639784 - | carboxyl-terminal protease RPD_0567 642566 - 641151 - | peptidase M23B TERM 567 641539 - 641492 - G 73 -11.2 -3.70902 | gap 1, opp_overlap 641492 641494, overlap 641493 GCGTGGATAGCGAAA TCC-CGCGTTCCACCCCGCCGAC GCC GTCGGCGCGGCCGAATTCGCGGA TTCTGCTGCCATTGA TERM 568 642524 - 642501 - G 77 -11 -3.78934 | gap 1, opp_overlap 642518 GCTTGCCGACAACAA GGCGACCGACT GCC AGCCGG-CGCC CGGGGTGTCGTCCTT RPD_0568 643143 - 642586 - | hypothetical protein RPD_0569 643822 - 643190 - | Iojap-related protein nadD 644670 - 644041 - | nicotinic acid mononucleotide adenylyltransferase RPD_0571 645993 - 644701 - | gamma-glutamyl phosphate reductase RPD_0572 646116 - 646400 + | hypothetical protein RPD_0573 646390 - 646689 + | plasmid stabilization system protein RPD_0574 647822 - 646692 - | gamma-glutamyl kinase TERM 569 648790 - 648845 + G 72 -8.3 -4.07568 | gap 3, opp_overlap 648808, overlap 648807 648808 648834 ATCTGACGGGCATCC CCATCGGCAG-CG-ACGAGATCGTCGGC TCG GCCGGCGACTTCATGCGTCAGCCG-TGG TTTTCGGGCGGCGCC TERM 570 648962 - 649004 + G 75 -13.3 -3.35679 | gap 1 GGACCCCTATCAGTT GCAGCGCGTCGCCGGTTGCG TCGC CGCAGCCCGCACCGCGC-GC TTCTGGGTCGAAGAG RPD_0575 648321 - 649289 + | Acyl-CoA dehydrogenase RPD_0576 649290 - 650075 + | LmbE-like protein RPD_0578 651715 - 650456 - | glycosyl transferase family protein RPD_0577 650029 - 650607 + | methyltransferase type 12 RPD_0579 652654 - 651830 - | exodeoxyribonuclease III (xth) RPD_0580 653887 - 652934 - | MaoC-like dehydratase TERM 571 653877 - 653927 + g 70 -13.5 -3.04144 | gap 1, opp_overlap 653892, overlap 653867 653892 TGCCGGGCAATGATG TCTTTCGGCAAAAAACTCAGCGGA TCGA TTCGCTGAG-TTTTTGCCGGTCGA TCTTCCCGATCGGGG TERM 572 653892 - 653913 + r 95 -10.9 -4.60041 | opp_overlap 653892, overlap 653877 TCTTTCGGCAAAAAA CTCAGCGGA TCGA TTCGCTGAG TTTTTGCCGGTCGAT TERM 573 653913 - 653892 - R 93 -8.7 -5.00616 | opp_overlap 653892 653877 TCTTTCGGCAAAAAA CTCAGCGGA TCGA TTCGCTGAG TTTTTGCCGGTCGAT RPD_0581 655473 - 653893 - | AMP-dependent synthetase and ligase RPD_0582 656693 - 655470 - | ABC-type branched-chain amino acid transport systems, periplasmic component RPD_0583 656829 - 657422 + | regulatory protein, TetR obgE 658662 - 657601 - | GTPase ObgE TERM 574 658894 - 658930 + G 93 -10.9 -4.4078 | opp_overlap 658882 ACACGGCGCGCGGGC CGCCGGCATTGCC CTGATGTTGCT GGCGATGCTGGCG TTTTCGTTCGGAGAC TERM 575 659610 - 659632 + G 71 -3.3 -4.58283 | gap 1, overlap 659612 ATACGATGATCGGCT TTGCC-GCCG CGTT CGGCTGGCTG TTTTTCGGCGAGTTG RPD_0585 658841 - 659761 + | hypothetical protein TERM 576 659812 - 659792 - T 76 -11.1 -3.73775 | opp_overlap 659782 659784 TTGAGGCCGACGAAA CGCGCGC TGAGGTC GCGCGCG CGTTCGCGACGTTCT RPD_0586 660239 - 660063 - | hypothetical protein TERM 577 660414 - 660382 - R 81 -13.4 -3.62591 | opp_overlap 660383 660384 660388, overlap 660385 660388 CCCAGAACCTCGAAA CGACAACGGCCGGG ACGAG CCCGGCCGTTGCTA CTTTATCGTTTCGAG TERM 578 660383 - 660415 + r 84 -10.7 -4.13654 | gap 2, opp_overlap 660382 660385 660388, overlap 660384 660388 CCAGAACCTCGAAAC G-A-CAACGGCCGGG ACGAG CCCGGCCGTTGCTAC TTTATCGTTTCGAGC TERM 579 660384 - 660412 + r 84 -16 -3.09007 | opp_overlap 660382 660385 660388, overlap 660383 660388 CAGAACCTCGAAACG ACAACGGCCGGG ACGAG CCCGGCCGTTGC TACTTTATCGTTTCG TERM 580 660411 - 660385 - R 93 -19.5 -2.92935 | opp_overlap 660384 660383 660388, overlap 660382 660388 AGAACCTCGAAACGA CAACGGCCGGG ACGAG CCCGGCCGTTG CTACTTTATCGTTTC TERM 581 660388 - 660408 + r 84 -15.4 -3.35869 | opp_overlap 660385 660382 660388, overlap 660384 660383 ACCTCGAAACGACAA CGGCCGGG ACGAG CCCGGCCG TTGCTACTTTATCGT TERM 582 660408 - 660388 - R 86 -15.4 -3.60419 | opp_overlap 660388 660384 660383, overlap 660385 660382 ACCTCGAAACGACAA CGGCCGGG ACGAG CCCGGCCG TTGCTACTTTATCGT RPD_0587 661039 - 660440 - | GCN5-related N-acetyltransferase TERM 583 661112 - 661086 - R 100 -18 -4.68645 | opp_overlap 661081 661104 661105 661109 CACGCAAAACGAAAA GGGGAGGCCGGA TAA TCCCGCCTCCCC TGGAGCCCTTTTTGT TERM 584 661104 - 661120 + r 74 -2.1 -4.91109 | opp_overlap 661086, overlap 661081 661105 661109 GAGGCCGGATAATCC CGCCTCC CCT GGAGCCC TTTTTGTGCTCCGCC rpmA 661448 - 661176 - | 50S ribosomal protein L27 rplU 661916 - 661530 - | 50S ribosomal protein L21 TERM 585 661572 - 661599 + g 70 -9.9 -3.65046 | gap 1 CGGTTCAGCCTTGAC GCGCTTCGGTCG CGGGC CGACCGAGG-GC TTCTTGCCGTCGGCG RPD_0590 662255 - 663403 + | hypothetical protein TERM 586 663606 - 663618 + F 79 -9.1 -4.12198 | GGGCCTGCCGGTCGC GTGCC GGT GGCAC TTTTCCCGGCTTGTC RPD_0591 664209 - 669098 + | DNA helicase, putative RPD_0592 670140 - 669310 - | aspartate/glutamate/uridylate kinase RPD_0593 671014 - 670154 - | aspartate/glutamate/uridylate kinase RPD_0594 672662 - 671337 - | general substrate transporter RPD_0595 672843 - 674000 + | ubiquinol oxidase, subunit II RPD_0596 674009 - 676018 + | cytochrome-c oxidase RPD_0597 676015 - 676644 + | cytochrome c oxidase, subunit III RPD_0598 676641 - 677033 + | cytochrome C oxidase subunit IV TERM 587 677777 - 677788 + G 70 -2.2 -4.58395 | overlap 677769 TGGCTTGCTGTTGCC TTCG GGAG CGGA TTTTTCCGGCGTGCA RPD_0599 677051 - 677887 + | Surfeit locus 1 TERM 588 677929 - 677895 - f 71 -13.6 -2.64218 | overlap 677894 677920 677921 677922 ATCGCTGACGACAAG GCCACCGCGATTTTGC AGG ACAAAACCGCGCCGGC GCGCTTGCGGCCGCG TERM 589 677956 - 677920 - g 72 -5 -4.46212 | gap 1, opp_overlap 677950, overlap 677895 677894 677921 677922 TTTTGCAGGACAAAA CCG-CGCCGGCGCGC TTGCGGCC GCGCCTCGGCGACGA TGTGACGCTTTCGCC RPD_0600 677907 - 679256 + | ATP-binding region, ATPase-like RPD_0601 679249 - 679782 + | response regulator receiver TERM 590 680005 - 680019 + G 74 -10 -3.85698 | CCGCCGACGCCGGGC TCGCCA CCG TGGCGA TTTATCCCGCCGACG TERM 591 680936 - 680951 + G 72 -11.8 -3.60296 | CGATCAGGCTGCCGT GCCGCG CCCG CGCGGC TTTGCGATGCAGCTC TERM 592 681048 - 681009 - g 73 -11.3 -3.72695 | gap 1, opp_overlap 681009 681034, overlap 680996 AGCGGCGCTACCAAA CCGACCGGCGGCACGCTG GCGAT CTTCGAGCCGCCG-TCGG GCCCGGGCGTGCGCG TERM 593 682740 - 682768 + G 77 -10.9 -3.78775 | GACGCCTTCGACATT CCGATCGTGTCGC TGT GCGATACGCCCGG TTTCATGGTCGGGCC RPD_0602 679926 - 683234 + | carbamoyl-phosphate synthase L chain, ATP-binding RPD_0603 684249 - 683350 - | 2-dehydropantoate 2-reductase RPD_0604 684420 - 685463 + | guanosine 5'-monophosphate oxidoreductase RPD_0605 686233 - 685502 - | regulatory proteins, IclR TERM 594 685938 - 685906 - G 72 -13.4 -3.14051 | opp_overlap 685917 685927, overlap 685904 TCACGTCGATGAAGA CCGCCATCACCCCG GCCGG CGCGGCGATGGCGA CGGTCTCGCCGGTTT RPD_0606 687122 - 686274 - | Citryl-CoA lyase TERM 595 687048 - 687072 + g 85 -9.9 -4.24002 | CAGATCGATGATCAG GGCGTCGGCAG CGC CTTGCGACGCC TTTTCGAATTTGCGC RPD_0607 687574 - 687122 - | MaoC-like dehydratase RPD_0608 688815 - 687619 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 596 688994 - 688976 - H 100 -10.2 -5.28414 | CAACAAACAGAAAAA CGGCTGTC CAC GGCAGCCG AAGGGAGGATCGAAG RPD_0609 689010 - 690035 + | TRAP dicarboxylate transporter- DctP subunit RPD_0610 690069 - 690623 + | tripartite ATP-independent periplasmic transporter DctQ TERM 597 690858 - 690874 + G 72 -13.7 -3.01791 | ATTGGTGCTGCTCTC GGGCGTC GCC GACGCCC TGTTCAAGACGGCGT RPD_0611 690637 - 691926 + | TRAP dicarboxylate transporter- DctM subunit RPD_0612 691986 - 693152 + | acyl-CoA dehydrogenase-like TERM 598 693313 - 693283 - g 70 -13.3 -3.06183 | gap 1 CGGACGCTGACCGAA GC-GCTGGCCGAAC AATC GTTCGGCCTGCCGC CGTTCCGCCTGATGG TERM 599 693907 - 693873 - g 73 -14.2 -3.18264 | CTCCGGACTGATCAA CGACGCCGTGGTCGAT CTG ATCGCGCGCGGCGTCG TCACCAATGCCTGCA RPD_0613 693181 - 694428 + | acetyl-CoA hydrolase/transferase RPD_0614 695994 - 694606 - | VWA containing CoxE-like RPD_0615 696941 - 695994 - | ATPase RPD_0616 698014 - 696938 - | acyl-CoA dehydrogenase-like TERM 600 697373 - 697337 - G 81 -15 -3.54424 | overlap 697338 CTCGATGTCGCGAAA CGGCAGCGCCATCGCC GGATA GGCGTCGGCGTCGCCG CCGATCCGCGCCGAC TERM 601 697394 - 697338 - G 72 -15 -2.72511 | gap 1, overlap 697337 TCGATGTCGCGAAAC GGCAGCGCCATCGCCGGATAGGCGTCG GCGT CGCCGCCGATCCG-CGCCGACGCCGGC ACGACGCAATCGTCG TERM 602 697594 - 697631 + g 75 -6.7 -4.42806 | opp_overlap 697610 TGATCCACGCTTTGC GGCCACGCAGCACGAAG CCGC CGTCGCGCGGCTCGGCC TTTGTTTGCAGATGC TERM 603 697930 - 697907 - G 82 -12.4 -3.94188 | overlap 697923 ACCGATCTGAAACAA TCCGGCGCGC TGAA ACGCGCCGAA CGGATCACGCCGACG TERM 604 698205 - 698161 - R 100 -17.9 -3.94877 | overlap 698162 ATGCTCGAACAAGAA CCTGGAGCGGGATGACGATTC GAA GATAAGTCATCCCGCTCCAGA AAGTAGGGGAGCAAT TERM 605 698204 - 698162 - R 91 -19.2 -2.96444 | overlap 698161 TGCTCGAACAAGAAC CTGGAGCGGGATGACGATTC GAA GATAAGTCATCCCGCTCCAG AAAGTAGGGGAGCAA RPD_0617 700362 - 698230 - | catalase TERM 606 698981 - 699005 + g 72 -5.6 -4.30719 | gap 1, opp_overlap 698978 TCGGCGAACAATTCG CCGCGTGCGCG CCGC CGCTCGC-CGG TTTCTTCTGCGGGGA TERM 607 699997 - 699976 - G 70 -8.6 -3.9398 | opp_overlap 699991, overlap 699977 CGAGAAGCGCACAAA GGCCGGGG TCTTTT CCCCGGCG CGCTGGAAAATATCC TERM 608 700081 - 700054 - G 78 -6.2 -4.57569 | gap 1, overlap 700055 700056 700058 GTAGGTTTCGAAAAA GCCATGCGCGCCG AAG CCGCGGGCAT-GC ACCACCCGCTCCGGG TERM 609 700284 - 700310 + g 83 -15.2 -3.62591 | overlap 700285 700287 GGCCGCGCTGAATGC TCGCATCCGCGA TCG TCGCGGATGTGG TTTCGGAATTCTCGG TERM 610 700285 - 700309 + g 77 -16.5 -2.77233 | overlap 700284 700287 GCCGCGCTGAATGCT CGCATCCGCGA TCG TCGCGGATGTG GTTTCGGAATTCTCG TERM 611 700287 - 700307 + g 76 -15.5 -2.92935 | overlap 700285 700284 CGCGCTGAATGCTCG CATCCGCGA TCG TCGCGGATG TGGTTTCGGAATTCT RPD_0618 701219 - 700581 - | cytochrome c, class I TERM 612 701266 - 701222 - R 80 -16.3 -2.62735 | gap 1, opp_overlap 701229 701253 ACAGTCTTGACATCA CGCCGC-TGGCGGCGGCCGC CTTGTT GCGGTCGCCGCCGTGCTGCG AAATGCGAGGATCAG TERM 613 701229 - 701241 + r 70 -10.5 -3.65046 | opp_overlap 701222 TGACATCACGCCGCT GGCGG CGG CCGCC TTGTTGCGGTCGCCG RPD_0619 702539 - 701286 - | putative L-sorbosone dehydrogenase TERM 614 702017 - 701986 - G 72 -13.8 -3.05384 | gap 1, opp_overlap 702011 702012, overlap 701988 CCGTGCGCGACGTAA GACGGCATG-TCGTC ATA GACGACCTTGCCGTC GCCGAGCTTGTCGAG TERM 615 702886 - 702857 - R 100 -20.8 -4.18018 | CGCCTGGATCGAAAA TGCGGGACGGCG GATCGT CGCCGTCCCGCA TCGTGGCGAATACTC RPD_0620 704549 - 702900 - | major facilitator transporter RPD_0621 704827 - 704612 - | putative NAD-dependent formate dehydrogenase delta subunit RPD_0622 705644 - 704817 - | formate dehydrogenase accessory protein RPD_0623 708493 - 705647 - | formate dehydrogenase, alpha subunit TERM 616 706003 - 706031 + g 73 -12.3 -3.40403 | CGTGCCATACCGTAT TGGCGGTGCGCCG CGT CTGCGCGCCGACA TTGTACTGCGACAGG RPD_0624 710061 - 708505 - | NADH dehydrogenase (quinone) TERM 617 709221 - 709244 + g 73 -11 -3.72576 | CCGTGCCGCGCTTGC CCTCGAGGCT TTCC AGCATCGAGG TTTCCTCGCCGCAGA RPD_0625 710528 - 710058 - | formate dehydrogenase subunit gamma RPD_0626 711601 - 710645 - | LysR, substrate-binding TERM 618 711393 - 711383 - G 70 -8.2 -3.92522 | opp_overlap 711362, overlap 711384 CGTGAAGCCGAGAAA GCGG GAG CCGC GCTGCACCAGCATCA TERM 619 711695 - 711657 - R 100 -19 -4.12603 | gap 1 TCGACGAAATAACAA GACCCCGC-CTCCCGAT TGCGGC ATCGGGAGTGCGGGGCC AGTCAGGGGAGAGAC RPD_0627 713070 - 711847 - | S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase TERM 620 713012 - 712993 - G 72 -7.2 -4.26019 | gap 1, opp_overlap 713005, overlap 712984 712995 GAACCAGATCGAAAA CAGACGATC CCA GATCGTC-G ACTCGCTGCGATCCT TERM 621 713011 - 712995 - G 73 -10.9 -3.72315 | opp_overlap 713005, overlap 712984 712993 ACCAGATCGAAAACA GACGATC CCA GATCGTC GACTCGCTGCGATCC RPD_0628 713221 - 713928 + | methyltransferase type 11 TERM 622 713936 - 713957 + F 70 -10.1 -3.66028 | overlap 713908 CGGCATGACCGGATG GCCCGCG CTGCTTGC CGCGGGC TTGTTGGAGATTGTC RPD_0629 714391 - 715464 + | high-affinity nickel-transporter RPD_0630 715471 - 716496 + | transport system permease protein TERM 623 716771 - 716804 + G 70 -10.9 -3.53012 | gap 1 TCTGGTGCATTGGCC GCTGCCGGTGCGCGAC GTC GTCGCGC-TCGGACGC TTTCCGCACGGCGCG RPD_0631 716493 - 717275 + | ABC transporter related TERM 624 717579 - 717567 - g 74 -10.5 -3.83026 | GGCCGCTACACCAAA CGCGC GAC GCGCG AGCTGCTGAAGCAGC RPD_0632 717279 - 718118 + | periplasmic binding protein TERM 625 718315 - 718353 + G 75 -3.1 -4.72272 | gap 1, opp_overlap 718301, overlap 718302 718301 TCGGCGGGAATCCTC GCC-ATTCTGGCGGTGAT CGCG GTCACCGGAAGCATCGGC TTTTTCATCGAAGCG TERM 626 718558 - 718592 + G 76 -6.5 -4.56775 | gap 2, overlap 718559 CTGGACGAGGCCGGG GTCTCGCGCGCGGCGAT CGA ATC-CTGCGCG-GAGAA TTTTTCCGACGGCGT RPD_0633 718120 - 719091 + | cobalamin biosynthesis protein CobD RPD_0634 720551 - 719064 - | cobyric acid synthase TERM 627 719290 - 719252 - G 70 -13 -3.01712 | TGTCGTTGGTGAACA GGCCGTGCAGATAGGTGC CTT GCACCCTTCCGCCCGGCG AGATCGCGCCGTCGG TERM 628 720219 - 720234 + g 70 -4 -4.56597 | CGGCATCAGCGCCGC CTTCTT GTCC AGGAAG TTTTTGGCGCCGAGC TERM 629 720383 - 720408 + g 77 -12.5 -3.65201 | GGGCGCGTCCGATCT CGCCGCCGTCG GCGG TGACGGCTGCG TTGTTCGACATGTTC TERM 630 720635 - 720615 - R 72 -14 -2.77523 | overlap 720612 720610 CGCGCACGAAGATCA CCCTCCCC TGGAG GGGGAGGG TCGCTCGCGTAGCGA RPD_0635 721431 - 720805 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 631 720913 - 720946 + g 74 -8.1 -4.25104 | gap 1, overlap 720913 CGCCGGATTGGCGTT G-CGGCCGGTGATCAC CAC GTGCTTGTCGGCCGGC TTTTCATCACGCAGG cobN 725171 - 721428 - | cobaltochelatase TERM 632 722123 - 722085 - G 86 -18 -3.14132 | opp_overlap 722094 GCCTTCGTCGATCAA GGCCTGCAGCCCGGCGCC ATA GGCGCCGGGTTTCGAGCC GAACACCCGAAGGCC TERM 633 722094 - 722114 + g 100 -19.7 -3.53012 | opp_overlap 722085 GATCAAGGCCTGCAG CCCGGCGCC ATA GGCGCCGGG TTTCGAGCCGAACAC RPD_0637 726314 - 725307 - | cobalamin (vitamin B12) biosynthesis CobW RPD_0638 726851 - 726318 - | cobalbumin biosynthesis enzyme TERM 634 726762 - 726782 + g 72 -4.5 -4.56597 | overlap 726764 GAGGTAGATCCGCGA CAGGGCGCT GTC GGCGACCAG TTTTTCACCGAACAC RPD_0639 727435 - 726848 - | hypothetical protein TERM 635 728421 - 728393 - g 73 -11 -3.63515 | gap 1 CGGCATGGCGAAGAA GCGC-GCCGCGAT CGAG ATGGCGGCCGCGC GCAGTGATGCGACCG TERM 636 728488 - 728539 + G 100 -13.7 -4.36914 | opp_overlap 728476, overlap 728465 728476 AAATCGCGATGATGA CCGGCG-CGATTCTCGGCGCGGCGT CGCA GCGCCG-GCCGGTGATCGTCGACGG TTTTATCGCGACCGC RPD_0640 727743 - 728798 + | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase RPD_0641 728795 - 729496 + | Cob(II)yrinic acid a,c-diamide reductase RPD_0642 729640 - 729906 + | hypothetical protein RPD_0643 730470 - 729952 - | hypothetical protein TERM 637 730195 - 730242 + g 74 -12.6 -3.55444 | gap 1 CTTGGCTGCAGGGAG CCGGCT-CGGTGGCTGGGCCGCT TGC GGCGGCGCAGCCGTCACAGCAGG TTTGGCCGCTGCCGC RPD_0644 730804 - 730592 - | hypothetical protein RPD_0645 730929 - 731258 + | CutA1 divalent ion tolerance protein TERM 638 731291 - 731259 - T 73 -11.3 -3.61398 | opp_overlap 731248 731260, overlap 731260 731278 GTCGGCGCTGAATAA CGCTTCGGTTCTGAC TGA ATCAGAGCCGAAGCT TTGATCATTCACGCT TERM 639 731290 - 731260 - T 75 -14.8 -2.76696 | opp_overlap 731248 731260, overlap 731259 731278 TCGGCGCTGAATAAC GCTTCGGTTCTGAC TGA ATCAGAGCCGAAGC TTTGATCATTCACGC TERM 640 731260 - 731290 + T 95 -16.3 -3.84246 | opp_overlap 731259 731260 731278, overlap 731248 TCGGCGCTGAATAAC GCTTCGGTTCTGA CTGAA TCAGAGCCGAAGC TTTGATCATTCACGC RPD_0646 731760 - 731296 - | hypothetical protein TERM 641 731468 - 731458 - G 76 -8.2 -4.16842 | opp_overlap 731458 731459, overlap 731459 CGGAGCGGTAAGAAA GCCG AGC CGGC GCACCAGCTCGCATT RPD_0647 732022 - 731828 - | hypothetical protein RPD_0648 732250 - 733221 + | hypothetical protein RPD_0649 733338 - 733526 + | hypothetical protein RPD_0650 734483 - 733611 - | hypothetical protein TERM 642 733841 - 733818 - G 83 -15.3 -3.57792 | opp_overlap 733832 733836, overlap 733822 GCATCGACTGTGAAA GCGACGCGC CAGATC GCGCGTCGC GCGCGCGATCGCGGC RPD_0651 735268 - 734561 - | phosphoglycerate mutase TERM 643 735283 - 735298 + r 82 -3.2 -5.24129 | TAGTCATCACCTCCC TGGGTT CAAC GGCCCA TTTTTTCTCCGGAGC RPD_0652 737810 - 735384 - | hypothetical protein RPD_0653 739389 - 737830 - | NADH/ubiquinone/plastoquinone (complex I) TERM 644 739654 - 739620 - g 89 -18 -3.39327 | overlap 739634 GGTTCAGATCCAGAA GCTCGAACACCAGATG GGC CATCCGCTGTTCGAGC GGGTGGGCAAGAGGC RPD_0654 739498 - 740397 + | regulatory protein, LysR RPD_0655 740645 - 740427 - | hypothetical protein RPD_0656 741208 - 740669 - | hypothetical protein TERM 645 741125 - 741109 - G 77 -3.6 -4.71426 | overlap 741080 741111 GTCCGATGAAGAAAA CCGCGA TGGCT TCGCTG AGGACGTTGCGGTCG RPD_0657 741649 - 742233 + | hypothetical protein TERM 646 742230 - 742272 + T 93 -3.2 -5.63517 | opp_overlap 742227 742230, overlap 742233 742235 CAGGTCCCAACACCA CTAGCGCGGAATGACTTATC TTC GAATCGTCATGCCGCTCTCG TTTTTTGTTTGAGCA TERM 647 742395 - 742351 - T 70 -12.4 -3.14881 | gap 3, opp_overlap 742354 742357, overlap 742354 742355 GAATTGCCGGAGTAA GAATCG---CCGCGACGGCTG GTTCGT CAGCCGTCGCGGTTTCGATTC GTCACACCGCGATGA TERM 648 742389 - 742354 - T 74 -10.3 -3.71848 | opp_overlap 742354 742357, overlap 742351 742355 TTGCCGGAGTAAGAA TCGCCGCGACGGCTG GTTCGT CAGCCGTCGCGGTTT CGATTCGTCACACCG TERM 649 742388 - 742355 - T 74 -13.8 -2.82895 | opp_overlap 742354 742357, overlap 742354 742351 TGCCGGAGTAAGAAT CGCCGCGACGGCTG GTTCGT CAGCCGTCGCGGTT TCGATTCGTCACACC TERM 650 742357 - 742386 + T 100 -21.5 -3.78329 | opp_overlap 742355 742354 742351, overlap 742354 CCGGAGTAAGAATCG CCGCGACGGCTGG TTCG TCAGCCGTCGCGG TTTCGATTCGTCACA RPD_0658 743344 - 742397 - | dihydrodipicolinate synthase RPD_0659 743792 - 743349 - | hypothetical protein RPD_0660 744101 - 743823 - | hypothetical protein RPD_0661 744644 - 744381 - | hypothetical protein TERM 651 746075 - 746061 - g 85 -10 -4.27316 | CGCGCGAAGTCAAAA TGGCGA TGC TCGCCA TCCTCGTCCTGCCTC RPD_0662 744806 - 746509 + | potassium-transporting ATPase subunit A TERM 652 747910 - 747873 - g 72 -13.3 -3.14931 | opp_overlap 747866, overlap 747882 GCGATCGCCGACGAA GTCGCCAAAGCGGGCGG CACG CCGCTCGCCGTGGCGAA GGATGGTCGTCTGCT TERM 653 747901 - 747882 - g 70 -10.6 -3.58037 | opp_overlap 747866, overlap 747873 GACGAAGTCGCCAAA GCGGGCGG CACG CCGCTCGC CGTGGCGAAGGATGG RPD_0663 746532 - 748655 + | potassium-transporting ATPase subunit B RPD_0664 748667 - 749272 + | potassium-transporting ATPase, C subunit TERM 654 750265 - 750224 - g 73 -14.3 -3.18582 | gap 1, opp_overlap 750225 CAGCTCAGCGAGGAA CGCCGCGACCGGCTCGCGGA TAC TCTGCG-GCTGGCCGAGGCG CTGGGCGGCGAGGCG TERM 655 750710 - 750720 + G 70 -4 -4.48713 | AGCGTCACGGCGTCA TTGT GCT ACAA TTTCTTCTTCCTGCC RPD_0665 749315 - 752038 + | osmosensitive K+ channel His kinase sensor RPD_0666 752035 - 752757 + | response regulator receiver RPD_0667 752792 - 753238 + | phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPD_0668 754383 - 753652 - | hypothetical protein RPD_0669 754674 - 754399 - | hypothetical protein TERM 656 754590 - 754548 - G 76 -14.7 -3.13403 | opp_overlap 754571, overlap 754519 754546 CGCGGCTGACGAACA GGCCGCCGAAGCGTCCGTG CTGCT CGCGGGCGATCCAGCGGCC GCGATTGTCCCGACC TERM 657 755125 - 755080 - R 82 -2.8 -5.18726 | gap 3, opp_overlap 755080 755081, overlap 755081 755082 755084 755110 755111 755118 GCGTCAGAACAAAAA GTTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAGG TCGGTTGCAGGCCGA RPD_0670 756110 - 755121 - | hypothetical protein RPD_0671 756647 - 756225 - | putative monovalent cation/H+ antiporter subunit G TERM 658 756618 - 756597 - G 70 -6.5 -4.2338 | overlap 756598 GACGAACAGAAACAA CGCGCCGAT CAGG ATCAGCGCC GAAACCAGGATTTCG RPD_0672 756924 - 756655 - | putative monovalent cation/H+ antiporter subunit F RPD_0673 757409 - 756921 - | putative monovalent cation/H+ antiporter subunit E RPD_0674 758941 - 757406 - | putative monovalent cation/H+ antiporter subunit D RPD_0675 759309 - 758938 - | putative monovalent cation/H+ antiporter subunit C RPD_0676 762186 - 759310 - | putative monovalent cation/H+ antiporter subunit A RPD_0677 762936 - 762526 - | putative flagellar basal-body rod protein flgC RPD_0678 764598 - 763039 - | hypothetical protein TERM 659 763119 - 763148 + g 71 -14.3 -2.90194 | gap 1 TCGGAACGCTCTTCT TGCCGGTG-CCGCG CAG CGCGGTCAGCGGCA TCTGCTTGCGCCGGT TERM 660 763249 - 763297 + g 74 -10.2 -3.8211 | opp_overlap 763260, overlap 763227 GAGTCCGGTCGCATG CGCGG-GAACGATGCTCGGCGCGG TGT CCTCGCGGAGC-TCGATCACCTCG TTGTTGTCCGTCGCC TERM 661 764399 - 764386 - G 79 -2.3 -5.10461 | overlap 764388 GCGATCGAACAAAAA TAGCG TCAG CGCGA TCACCAGCGCGACAG TERM 662 764618 - 764632 + r 90 -2 -5.40004 | overlap 764619 CTTCTGCCTTCGAGT TTACGC CGC GCGTCG TTTTTTGATTTGGTC TERM 663 764756 - 764805 + r 77 -13 -3.6502 | gap 1, overlap 764732 764766 GGAAACCCCACCGAT GCGTTAATC-GCCGCCGCGCA GAAAAAAGA TGCGCGGCGGTTGCTTAATGC TTTGAATCGGAAATG TERM 664 764766 - 764794 + r 83 -14.6 -3.44222 | overlap 764756 CCGATGCGTTAATCG CCGCCGCGCA GAAAAAAGA TGCGCGGCGG TTGCTTAATGCTTTG RPD_0679 765771 - 764854 - | PepSY-associated TM helix RPD_0680 766076 - 766342 + | hypothetical protein RPD_0681 766525 - 766917 + | hypothetical protein TERM 665 766976 - 766939 - f 86 -15.5 -3.55761 | CAGGCACTTCTCAAA GGGGGCTGCGCGGTCAG GCGT CTGAGCGCGGAGCCCTC TACAGTACCAAGGGT TERM 666 767216 - 767202 - g 77 -10 -3.9644 | opp_overlap 767200 GGCTGAAGAGAACAA GGCATG GTT CATGCC GATCTTCGACGATCG RPD_0682 766999 - 767403 + | hypothetical protein RPD_0683 767746 - 768087 + | hypothetical protein RPD_0684 768258 - 768476 + | hypothetical protein TERM 667 768590 - 768542 - T 100 -22.7 -5.18726 | opp_overlap 768544, overlap 768543 768546 GCGTCAGAACAAAAA TTTAGAGCTTCTCCGGTTCTGAT TCC ATCAGAACCGGAGAAGCTCCATT TTCAGGTCGAACCGC TERM 668 768589 - 768543 - T 100 -26.2 -3.70512 | opp_overlap 768544, overlap 768542 768546 CGTCAGAACAAAAAT TTAGAGCTTCTCCGGTTCTGAT TCC ATCAGAACCGGAGAAGCTCCAT TTTCAGGTCGAACCG TERM 669 768544 - 768588 + T 100 -27.5 -4.13767 | opp_overlap 768543 768542 768546 GTCAGAACAAAAATT TAGAGCTTCTCCGGTTCTGAT TCC ATCAGAACCGGAGAAGCTCCA TTTTCAGGTCGAACC TERM 670 768586 - 768546 - T 100 -30.1 -2.9432 | opp_overlap 768544, overlap 768543 768542 CAGAACAAAAATTTA GAGCTTCTCCGGTTCTGAT TCC ATCAGAACCGGAGAAGCTC CATTTTCAGGTCGAA RPD_0685 770280 - 768592 - | protein of unknown function DUF894, DitE TERM 671 770880 - 770911 + G 73 -15.2 -2.91582 | gap 1, overlap 770868 770867 CGCCGACGTGTCGCA CGCCGTG-TTGTGCG GGA CGCCCAATCACGGCG TCTATGCCTGGGATG TERM 672 771575 - 771543 - g 70 -11.2 -3.53012 | gap 1, opp_overlap 771547 771570, overlap 771544 TCTGCGCGCCGCAAA GCCCGCGACGCCGCC CGAC GCCGGCGTCG-GCGC GGTGGTGATGATGTC TERM 673 771570 - 771602 + G 73 -9.7 -3.92542 | opp_overlap 771543 771544, overlap 771547 GCCCGACGCCGGCGT CGGCGCGGTGGTGAT GAT GTCGCGGCCGCGCGG TTATTTCGGCCTGCC TERM 674 771714 - 771736 + G 74 -14.8 -3.01712 | GCTGCCGGCGTCGGA GGCCGGCCGC GCG GTGGTCGGCC TGTTCAACGAGGAGC RPD_0686 770389 - 771816 + | twin-arginine translocation pathway signal RPD_0687 771892 - 773280 + | cytochrome P450 TERM 675 773394 - 773366 - f 76 -10.1 -3.91897 | overlap 773368 GCCCCGATCGAGAAA CAGGCGGCGCTGC GCG GCATCGCCGACAG GGTGCTGGTGTATGA TERM 676 773392 - 773368 - f 73 -11.3 -3.5511 | overlap 773366 CCCGATCGAGAAACA GGCGGCGCTGC GCG GCATCGCCGAC AGGGTGCTGGTGTAT RPD_0688 773545 - 774021 + | hypothetical protein RPD_0689 774216 - 774995 + | short-chain dehydrogenase/reductase SDR RPD_0690 775218 - 775718 + | hypothetical protein TERM 677 776197 - 776215 + G 82 -11.7 -4.07568 | overlap 776170 CTTCGCCGCCGACAG CGCGGTG TTCAC CACCGCG TTTTCGCGGCGCGGG RPD_0691 775790 - 776602 + | enoyl-CoA hydratase RPD_0692 777078 - 777368 + | protein of unknown function YGGT RPD_0693 777401 - 777724 + | hypothetical protein TERM 678 777759 - 777778 + F 100 -13.6 -5.63236 | AGGGCGACTTCGATC GCCTCTCC GTCC GGAGAGGC TTTTTGTTTTTCGAT RPD_0694 777825 - 778712 + | methenyltetrahydrofolate cyclohydrolase RPD_0695 780361 - 778880 - | hypothetical protein RPD_0696 780934 - 780398 - | inorganic pyrophosphatase TERM 679 780817 - 780803 - G 70 -3.5 -4.55295 | CGCGGTATAAAGAAA CCGGT CGACC ACCAG GGTGCCGGCGGCCTT RPD_0697 781518 - 781009 - | GCN5-related N-acetyltransferase RPD_0698 782983 - 781739 - | amine oxidase TERM 680 781892 - 781841 - G 78 -14.3 -3.61398 | overlap 781844 TTCGCCGGCGAAGAA CAGCC-GGCCGTCGACCGGCGCCGC CAGC ACGGCGCGGG-CGCCGGCATGGCCG GGCAGTGCGTGCGAG TERM 681 782111 - 782075 - G 70 -3.6 -4.56597 | gap 1, overlap 782076 782077 GCGGCCGCCGAAAAA TCCCTCGACGCCG-TCG TGGC CGAACGGCCGCAAGTGA TAAGTCCCGATCGCG TERM 682 782663 - 782639 - G 73 -13.6 -3.28924 | opp_overlap 782617 GACCCGCTCGTAGAA CGCGTCCAGC GCCTT GCTGAACGCG GCGCGCTCGCGCGGC TERM 683 783050 - 783070 + r 77 -14 -3.27298 | opp_overlap 783050 783063 CGCCCGACATGAAAA TGCCCGGC ACGAA GCCGGGCA TTGATCATTCGGAGA TERM 684 783070 - 783050 - R 100 -14 -4.34402 | opp_overlap 783050, overlap 783063 CGCCCGACATGAAAA TGCCCGGC ACGAA GCCGGGCA TTGATCATTCGGAGA RPD_0699 784924 - 783101 - | GTP-binding protein TypA TERM 685 785079 - 785050 - H 86 -7.1 -5.09426 | gap 1, overlap 785052 785053 GGCAATTCCAAAAAA CAG-GCCCGGCC AAATGAG GGCCGGGCACTT GCACGCGTTGCGACG TERM 686 785076 - 785052 - H 81 -9.9 -4.17355 | overlap 785050 785053 CAATTCCAAAAAACA GGCCCGGCC AAATGAG GGCCGGGCA CTTGCACGCGTTGCG TERM 687 785075 - 785053 - H 75 -13.4 -3.09328 | overlap 785052 785050 AATTCCAAAAAACAG GCCCGGCC AAATGAG GGCCGGGC ACTTGCACGCGTTGC TERM 688 787049 - 787019 - g 73 -4 -4.62069 | gap 1 CCGCCACTGGAAAAA CGTCG-AGAGCTA CGCCTT CAGCCCCACGACG GGAAACATCAACCGC RPD_0700 785853 - 788183 + | TonB-dependent siderophore receptor RPD_0701 788186 - 789634 + | PepSY-associated TM helix RPD_0702 791089 - 789647 - | TRAP transporter solute receptor TAXI family protein TERM 689 790388 - 790361 - G 74 -9.8 -3.87994 | gap 1, overlap 790363 ATCGATTCCGAGAAA CACCG-GCTCGGC CCC GCCATGCGCGGTG GCGGCCAGCGCCTCG phhB 791260 - 791565 + | pterin-4-alpha-carbinolamine dehydratase RPD_0704 791652 - 792026 + | hypothetical protein RPD_0705 792684 - 792049 - | regulatory protein, TetR TERM 690 792082 - 792097 + g 72 -8.2 -4.09685 | CCGACGCAGCACGCG GGTCGC CATC GCGGCC TTTTCGGCAATGGCC TERM 691 792264 - 792250 - G 75 -4.9 -4.65895 | CGCCTGATCGAAAAA CCGGG TCACG CCCAG CACCACCGGCAGCCG TERM 692 792626 - 792651 + g 90 -3.1 -5.51353 | gap 1, opp_overlap 792604, overlap 792627 792628 AAGGCCGCTTCCAGG ATCGCCG-CCCG CCG CGGGTCGACGGA TTTTTCTTCTTTTTC TERM 693 792761 - 792740 - H 79 -10.9 -3.86346 | CGATCGCGCTATAAA TCCGGTACC CGAT GGTACCGAA ACGTGGCCCGGCGTC TERM 694 793309 - 793345 + G 73 -13.7 -3.21099 | opp_overlap 793284, overlap 793266 CGTCACGGCCGGCGC GCTGATCTCGATCTTCG GGC CGAAGCTCGCGATCCGC TTGGTGCTGCGGCGG TERM 695 793474 - 793417 - g 78 -14.7 -3.23853 | gap 1, overlap 793415 793419 CTTCGCCAAGCAAGA CACCGCGGACGACGGCGCCGATTGCGAC GTC GCGGTGATCGGCGCCGGCATCGGCGG-G TTGACGGCGGCCGCA TERM 696 793473 - 793419 - g 90 -18.4 -3.18366 | overlap 793415 793417 TCGCCAAGCAAGACA CCGCGGACGACGGCGCCGATTGCGAC GTC GCGGTGATCGGCGCCGGCATCGGCGG GTTGACGGCGGCCGC RPD_0706 792836 - 794989 + | FAD dependent oxidoreductase RPD_0707 796045 - 795071 - | zinc-binding alcohol dehydrogenase TERM 697 795108 - 795135 + g 72 -12 -3.53012 | gap 1 CCCATCGCCTGGCGG CCGCCGA-GCACT TTC AGCGCGTCGGCGG TTTGCGCCAGGGGGA RPD_0708 796333 - 796911 + | hypothetical protein TERM 698 796941 - 796955 + F 76 -12.8 -3.53444 | ATTCGGCCGGCGCCA GCCGCG ATT CGCGGC TTTGCAGAACCGTCG TERM 699 797348 - 797363 + G 77 -5.4 -4.58395 | gap 1 GGAACTGGATGTATC TCCGCGG CGC CCG-GGA TTTTTCCGAAATGAC RPD_0709 797170 - 798366 + | hypothetical protein RPD_0710 798371 - 798964 + | metal-dependent phosphohydrolase RPD_0711 798964 - 799482 + | hypothetical protein TERM 700 799486 - 799528 + F 83 -9.6 -4.25104 | opp_overlap 799466 799467 CCGTCGCCCTGAGGC GCCGGGCCGCAGCCGGAG CTCCGGC CGCTCGCGGCGGCCCGCC TTTTCATCCCCCGCC RPD_0712 799564 - 800340 + | phosphoesterase, PA-phosphatase related TERM 701 800577 - 800537 - g 75 -9.7 -4.08144 | opp_overlap 800509 TGGATGAAGCAGAAA GGC-GCCCGCGTGTTCGCC TATAC GGCGAAT-CTCGGGCAGCC CGACGAGGCCGACTA RPD_0713 800435 - 801772 + | argininosuccinate synthase TERM 702 801862 - 801818 - f 84 -13.6 -3.76224 | gap 1, overlap 801819 GGCGCACGCAGCAAA GCTGCGGGCGAACCCGGAATC CCGA GATTCAGGGTTC-CCCGCGGT TCGACGCAGACCAGC TERM 703 801861 - 801819 - f 87 -17.1 -2.8552 | gap 1, overlap 801818 GCGCACGCAGCAAAG CTGCGGGCGAACCCGGAATC CCGA GATTCAGGGTTC-CCCGCGG TTCGACGCAGACCAG TERM 704 803183 - 803149 - g 70 -8.6 -3.93695 | gap 1, overlap 803151 803152 GGGATGATCGACAAA TACGCCCACGCGCTC GACATG GAGCGCGCGGTC-TA CGACACCATCATGCT RPD_0714 801988 - 803757 + | alkaline phosphatase TERM 705 803779 - 803757 - T 74 -12.7 -3.34398 | gap 1, overlap 803755 GGCTTCGGCGAAATA GCGGC-GGCG TCAC CGCCCGCCGC ACCATCCCTCGCGAC RPD_0715 804347 - 803766 - | nuclease (SNase-like) RPD_0716 804708 - 804487 - | hypothetical protein TERM 706 804639 - 804662 + g 70 -6.6 -4.25104 | GCGCGCGCTTCGCGG CGTCGGGCAG TTCC TTGCGCGGCG TTTTGGTCGGCACAG RPD_0717 804875 - 806227 + | Fmu (Sun) TERM 707 806276 - 806319 + F 73 -10.8 -3.60792 | opp_overlap 806275 806276, overlap 806277 806287 GCGTCGCCCGGAAAG CCGCTCGTCCACACCCCGCC CAAC GGCAGGGTGTGTGCTGGCGA TTTCCGGATTAAAAG TERM 708 806277 - 806318 + F 75 -14.3 -2.76261 | opp_overlap 806276 806275, overlap 806276 806287 CGTCGCCCGGAAAGC CGCTCGTCCACACCCCGCC CAAC GGCAGGGTGTGTGCTGGCG ATTTCCGGATTAAAA RPD_0718 806405 - 808291 + | heparinase II/III-like TERM 709 808833 - 808817 - g 72 -4.3 -4.56597 | overlap 808818 CGCGGCGGCGAAAAA TCACGAC GAC GTCGCGG TGGTGGTCGAGGCGT purH 808392 - 809984 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 710 810135 - 810095 - T 100 -19.1 -4.44667 | gap 1, opp_overlap 810092 810095 CGCTCTAACAACAAA GCC-GCAGCGGGACAGCG CATGAT CGCCATCCCGCTGCCGGC TGGTTTCAGGCCGCG TERM 711 810095 - 810135 + T 77 -14.7 -2.90496 | gap 1, opp_overlap 810095, overlap 810092 CGCTCTAACAACAAA GCC-GCAGCGGGACAGCG CATGAT CGCCATCCCGCTGCCGGC TGGTTTCAGGCCGCG RPD_0720 811235 - 810141 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 712 811281 - 811298 + r 73 -12.7 -3.13382 | opp_overlap 811260 811281, overlap 811273 GGCTTCAACGAAAAA GCCGCCA GGTC TGGCGGC TGTTCGGATTTGATG TERM 713 811298 - 811281 - R 100 -12.7 -4.8622 | opp_overlap 811281 811273, overlap 811260 GGCTTCAACGAAAAA GCCGCCA GGTC TGGCGGC TGTTCGGATTTGATG RPD_0721 812845 - 811448 - | major facilitator transporter RPD_0722 812909 - 814693 + | gamma-glutamyltransferase TERM 714 814705 - 814734 + F 78 -10 -4.09739 | gap 1 TTGATCCTGGTGGGG TGTCGTTGCCGGG CCTGA CCCGGCT-CGACA TTTTGAACGGCTTCG RPD_0723 814812 - 815693 + | short chain dehydrogenase RPD_0724 816596 - 815928 - | glutathione S-transferase-like RPD_0725 817019 - 816684 - | hypothetical protein RPD_0726 817134 - 817745 + | hypothetical protein TERM 715 818010 - 817985 - g 79 -7.5 -4.48713 | gap 1, overlap 817986 GCGACCAACAACAAA TCGCCGGCCGAA ACC CTCG-CCGGCGT GAAGAACAAACGCGA TERM 716 818035 - 818021 - g 74 -5.6 -4.44667 | opp_overlap 818031 818034 GGCGTGAAGAACAAA CGCGAA TTC TACGCG CTGGAGACGGCGCGC TERM 717 818339 - 818362 + G 90 -6.6 -5.24129 | gap 1, opp_overlap 818329 818327, overlap 818349 GAAGACGCGGTCGCT CG-CGGCGCGT TCG GCTCGCCGACG TTTTTTGTCGGCCAG TERM 718 818349 - 818381 + G 73 -4 -4.63218 | overlap 818339 TCGCTCGCGGCGCGT TCGGCTCGCCGACG TTTTT TGTCGGCCAGGAGA TTTTCTTCGGCAAGG RPD_0727 817829 - 818431 + | DSBA oxidoreductase TERM 719 818986 - 819019 + G 89 -14.5 -4.11484 | gap 1, opp_overlap 818978 GCAACATCTTCTTCA CCGGCGCCACCGC-CA GCC TGCGCGGCGGCTCCGG TTTTGCGGCCTTCGC RPD_0728 818574 - 819311 + | short-chain dehydrogenase/reductase SDR TERM 720 819571 - 819514 - g 74 -7.6 -4.25104 | gap 2, opp_overlap 819562, overlap 819487 819486 819515 GGCTCGTGATCAAAA GCCCGCACGGCGACCT-CACGATC-CCG AATC CGCCGACCGTGCAGGCCGCCGGGCTGAA GCCGGATTTCGACCT RPD_0729 819375 - 820295 + | 2-dehydropantoate 2-reductase RPD_0730 820706 - 822352 + | cytochrome c oxidase, cbb3-type, subunit I RPD_0731 822364 - 823098 + | cytochrome c oxidase, cbb3-type, subunit II RPD_0732 823108 - 823272 + | Cbb3-type cytochrome oxidase component RPD_0733 823280 - 824161 + | cytochrome c oxidase, cbb3-type, subunit III TERM 721 825506 - 825468 - g 70 -10.9 -3.61398 | gap 1, overlap 825469 CCGCTTCCTCAACAA GCG-CGGCTTCGACCGCG TCGT CGCGGTCGACGTCGTCGG CCCGCCGAATGCGGT TERM 722 825688 - 825633 - g 82 -16.2 -3.25539 | gap 1, opp_overlap 825675, overlap 825631 825634 CAACTCCAATCAAGA GCTCGCCAAGTCC-ACGCCGGTGACCT TCC ACGTCACCGACATCGGCCTCGGCGAGG TCGCCACCGCCAAGG TERM 723 825687 - 825634 - g 93 -19.7 -2.54841 | gap 1, opp_overlap 825675, overlap 825633 825631 AACTCCAATCAAGAG CTCGCCAAGTCC-ACGCCGGTGACCT TCC ACGTCACCGACATCGGCCTCGGCGAG GTCGCCACCGCCAAG RPD_0734 824266 - 825723 + | 4Fe-4S ferredoxin, iron-sulfur binding RPD_0735 825744 - 826244 + | FixH RPD_0736 826279 - 828474 + | copper-translocating P-type ATPase RPD_0737 828474 - 828641 + | cytochrome oxidase maturation protein, cbb3-type RPD_0738 828657 - 828863 + | hypothetical protein RPD_0739 828989 - 829213 + | hypothetical protein RPD_0740 829333 - 829842 + | regulatory proteins, AsnC/Lrp RPD_0741 830237 - 831925 + | circadian clock protein KaiC TERM 724 832092 - 832073 - g 76 -6.4 -4.46112 | gap 1, opp_overlap 832074, overlap 832074 832075 GTCGACTTAAAGAAA TCGC-CGCA GCT CGCGCGCGA GCACGGCATCGTTGC RPD_0742 831935 - 832213 + | KaiB RPD_0743 832216 - 833667 + | HWE histidine kinase RPD_0744 834251 - 835432 + | integrase catalytic subunit RPD_0745 835419 - 836774 + | sugar transferase TERM 725 837748 - 837771 + G 76 -6 -4.56775 | AATTTGCCGGCAGGT TTCCGGCC TCCTACAT GGCTGGAA TTTTTGCCCAGGCCT RPD_0746 836865 - 838133 + | glycosyl transferase, group 1 RPD_0747 838135 - 839007 + | dTDP-4-dehydrorhamnose reductase RPD_0748 839030 - 840040 + | polysaccharide biosynthesis protein CapD RPD_0749 840033 - 841154 + | UDP-N-acetylglucosamine 2-epimerase RPD_0750 841434 - 842840 + | polysaccharide biosynthesis protein RPD_0751 842837 - 843139 + | hypothetical protein RPD_0752 843146 - 843790 + | methyltransferase type 11 RPD_0753 843795 - 844997 + | glycosyl transferase family protein TERM 726 845195 - 845181 - g 74 -10 -3.85389 | TTTCAACAATCGAAA TGACCC TTT GGGTCA GCACGATGGGAGGCA TERM 727 845237 - 845226 - g 83 -4.4 -5.00884 | ACCTTTCCCAAAAAA TTGC CCTG GCAA TAGTCCTTGCCGCAT RPD_0754 845009 - 846439 + | hypothetical protein TERM 728 847056 - 847032 - g 74 -2.1 -4.84359 | TGATCCGCACAAAAA CCACGCG AATCTGCTCGA CGCATGG GCGCTTCTGGCAGCC RPD_0755 846436 - 847470 + | glycosyl transferase, group 1 RPD_0756 848399 - 847530 - | methyltransferase type 11 RPD_0757 848493 - 849173 + | glycosyl transferase family protein RPD_0758 849170 - 849508 + | hypothetical protein RPD_0759 851354 - 849873 - | hypothetical protein TERM 729 850532 - 850519 - G 77 -8.1 -4.42806 | GCAGGCGCAAACAAA GCGTC GATC GACGC ATCCGAAGTCCGTGC RPD_0760 852099 - 851365 - | integrase catalytic subunit RPD_0761 853146 - 852742 - | hypothetical protein TERM 730 853281 - 853271 - H 73 -8.2 -4.07687 | ATCGCCGTGGCAAAA GCCG CGA CGGC AAGACAGCGAGATGA RPD_0762 853465 - 853887 + | hypothetical protein RPD_0763 855832 - 854240 - | gamma-glutamyltransferase RPD_0764 858869 - 856152 - | GGDEF domain-containing protein TERM 731 859034 - 859009 - R 100 -18.3 -3.71649 | opp_overlap 859004 TGCGCAAATGCCAAA GAGCCGACGGC CAAC GCCGCCGGCTC TCGAATCCTATCCTT RPD_0765 859478 - 859077 - | hypothetical protein RPD_0766 859924 - 860136 + | hypothetical protein RPD_0767 861402 - 860137 - | acyl-CoA dehydrogenase-like TERM 732 860273 - 860263 - G 70 -8.2 -3.93695 | overlap 860264 CGGACCATCGAGAAA GCGC ATC GCGC GACCCCAGGTCCACA RPD_0768 861825 - 861478 - | putative cytochrome c552 precursor RPD_0769 862304 - 861831 - | hypothetical protein RPD_0770 864297 - 862465 - | GGDEF domain-containing protein TERM 733 864125 - 864164 + g 75 -11.4 -3.72695 | gap 1 AGGAAGTCGCCGCGG TCATCCAGCACCGTCACCG CTG CGGGGAGGGCGC-GGATGA TTTCCTCCAGCAGCT TERM 734 865105 - 865092 - g 79 -2.3 -5.01732 | opp_overlap 865093, overlap 865093 AAGCCGCGGAAAAAA CCTCG GCGA CGATG CGCGAGATTTACAAG RPD_0771 864476 - 865318 + | short-chain dehydrogenase/reductase SDR RPD_0772 866723 - 865344 - | cytochrome P450 TERM 735 865704 - 865745 + g 80 -15.7 -3.33815 | overlap 865708 865709 GAACTCGCGGGTGGC GCGGCGCGGCAGCGACGGC ACCG GCGGTCGCAGCCGCATTGC TTCCTTGAACGCCAT TERM 736 865708 - 865741 + g 77 -13.7 -3.45366 | overlap 865704 865709 TCGCGGGTGGCGCGG CGCGGCAGCGACGGC ACCG GCGGTCGCAGCCGCA TTGCTTCCTTGAACG TERM 737 865709 - 865740 + g 80 -17.2 -2.66899 | overlap 865708 865704 CGCGGGTGGCGCGGC GCGGCAGCGACGGC ACCG GCGGTCGCAGCCGC ATTGCTTCCTTGAAC RPD_0773 868241 - 866844 - | adenylyl cyclase class-3/4/guanylyl cyclase RPD_0774 868288 - 869235 + | heat shock protein HtpX TERM 738 870473 - 870494 + G 75 -2.9 -4.72127 | gap 1, overlap 870475 CGCTGATCCGGCCTT CAT-GCGCGG GCT CGGCGCGGTG TTCTTTTTCTTCTTC RPD_0775 869646 - 871058 + | major facilitator transporter TERM 739 871450 - 871429 - g 86 -17.3 -3.28712 | CGCCGCGCTGGAGAA CGGCGTCGC GCCG GCGACGCCG TGGCTGCTGCTGGCG RPD_0776 871259 - 872296 + | inner-membrane translocator TERM 740 873521 - 873537 + G 76 -15.1 -3.18681 | CGCTCGAGGCGCAGA CGCCGCG GCG CGCGGCG TTACTCGGATTGGGC RPD_0777 872293 - 874065 + | ABC transporter related RPD_0778 874062 - 874787 + | ABC transporter related RPD_0779 874828 - 875979 + | extracellular ligand-binding receptor TERM 741 875995 - 876024 + T 78 -14.3 -3.11072 | gap 1, overlap 876008 TAACCATCGTCGTCA TTCCGGG-GCGCGC GTA GCGCGAACCCGGAA TCTCTCTTGGCTACA TERM 742 876046 - 876087 + T 74 -13.7 -2.82895 | gap 1, opp_overlap 876042, overlap 876008 876046 876049 TTGGCTACAATTTCT GGATTCCGGGTTCGCGCAGC TTT GCTGCGCGC-CCCGGAATGA CTTGTTAGTCGAGGC TERM 743 876046 - 876088 + T 84 -13.5 -3.71848 | opp_overlap 876042, overlap 876008 876046 876049 TTGGCTACAATTTCT G-GATTCCGGGTTCGCGCAGC TTT GCTGCGCGC-CCCGGAATGAC TTGTTAGTCGAGGCG TERM 744 876049 - 876084 + T 90 -19.8 -2.67428 | gap 1, opp_overlap 876042, overlap 876008 876046 876046 GCTACAATTTCTGGA TTCCGGGTTCGCGCAGC TTT GCTGCGCGC-CCCGGAA TGACTTGTTAGTCGA RPD_0780 877499 - 876312 - | Serine--glyoxylate transaminase TERM 745 876345 - 876362 + g 79 -8.3 -4.30987 | opp_overlap 876339, overlap 876346 TGCCAGATAGTCGAT CGCGGCG CCGA CGCCGCC TTTGTTGTGCGGGAT RPD_0781 878411 - 877563 - | hypothetical protein RPD_0782 879159 - 878431 - | nuclease (SNase-like) RPD_0783 881058 - 879319 - | hypothetical protein TERM 746 880067 - 880049 - G 79 -7.4 -4.57073 | TAGCCGGCGTAAAAA TCGATCAG CGG CTGGTCGA GGATCGGGTCGGTGG RPD_0784 881484 - 882359 + | peptidase C14, caspase catalytic subunit p20 RPD_0785 883255 - 882497 - | carbonate dehydratase RPD_0786 883974 - 883342 - | putative phage repressor TERM 747 883779 - 883837 + g 80 -15.3 -3.22223 | gap 2 TGTCGATCGCGGTGT TGGTGGCCGCGAGCGCCTTGGCGACCGAC TCG GTCGAAGGCC-AG-CGTTCGCGGCCGTCA TTGGTGATCCGCTTC TERM 748 884107 - 884087 - H 86 -5.3 -5.24129 | TCCTGCGACAAAAAA CGTTGCGCT TGC AGTGCACCG AGGCCGCCGATACGG RPD_0787 884308 - 884652 + | hypothetical protein RPD_0788 884649 - 885743 + | dihydroorotate dehydrogenase 2 TERM 749 885815 - 885849 + T 91 -16.5 -3.56366 | gap 1 CCCTCGAGCACGTTA TTCCGGG-ATGCGCGC GTCA GCGCGCAGACCCGGAA TTTCGAAGAGTTCTT RPD_0789 886682 - 885948 - | beta-lactamase-like RPD_0790 887588 - 886884 - | carbonic anhydrase TERM 750 887739 - 887721 - R 74 -2.3 -4.8543 | gap 1, overlap 887722 887725 CAAGCTTTAGAAAAA CTCAGCCG ACCG CGGCGG-G TGGAAACGAAGCGCG RPD_0791 889077 - 887722 - | MATE efflux family protein TERM 751 887974 - 887956 - G 81 -12.4 -3.76393 | ATAGGCGAAGGCAAA CACGCCGA GGA TCGGCGCG AGCGCTACCAGCCAC RPD_0792 889393 - 889091 - | hypothetical protein TERM 752 889329 - 889316 - G 86 -5.9 -5.0538 | overlap 889318 CGCCAGCCGAAAAAA CACCG CGAG CGGCG AGCCGCCGAGGAAGC RPD_0793 891358 - 889466 - | ATP-dependent DNA ligase RPD_0794 892404 - 891355 - | putative mRNA 3-end processing factor TERM 753 892486 - 892505 + r 86 -16.4 -3.2029 | opp_overlap 892486, overlap 892480 892478 GAGCACAAACAAAAA CCCCGGCC GCGA GGCCGGGG TTCGATGTCTTGGTT TERM 754 892505 - 892486 - R 100 -16.4 -5.40464 | opp_overlap 892486 892480 892478 GAGCACAAACAAAAA CCCCGGCC GCGA GGCCGGGG TTCGATGTCTTGGTT RPD_0795 893915 - 892551 - | putative outer membrane protein TERM 755 894293 - 894313 + G 85 -10.4 -4.25104 | gap 1, overlap 894290 CTTCCGTCTTCACGT CCGCAGGCG CTTT CGCC-GCGG TTTTGCTCGCCGCCA RPD_0796 894262 - 895482 + | extracellular ligand-binding receptor TERM 756 895507 - 895540 + F 100 -22.5 -3.53811 | TCTCGAGCCCATGCT CGTGCAACGCCCGCC TCCT GGCGGGCGTTGTGCG TTTCCGGGCGCTGCG TERM 757 895802 - 895749 - g 82 -11.5 -4.09739 | opp_overlap 895749 CGAACTGCTCGAAAA GGCCCGCGCGCAACGTTCGGCGC TGCTGATC GCGCCGACCGGCGCGGGCAAGAC TTTGGCCGGATTCCT TERM 758 895991 - 895959 - g 70 -10.6 -3.51708 | gap 1, overlap 895955 GATCGCGCAAATGAA TCTGCCGATCCGGGT CGAG ACCCGCACCGGC-GA CACCCCGGTGTCGCG TERM 759 896982 - 897003 + G 70 -8.7 -3.90922 | gap 1, overlap 896983 897001 897002 CGCCCAGCACATCCT TGGCTGCGCC TGC GGCG-AGCCG TTCTTTGCGAACGAT RPD_0797 895564 - 898278 + | DEAD/DEAH box helicase-like TERM 760 898850 - 898867 + G 75 -9.1 -4.07568 | overlap 898839 898831 CAGCCGCCGCGGCCG CAGCGTC GAGC GGCGCTG TTTTGCCGGCGACGG RPD_0798 898317 - 899036 + | metallophosphoesterase RPD_0799 899907 - 899116 - | hypothetical protein RPD_0800 900830 - 899907 - | hypothetical protein TERM 761 900607 - 900583 - G 70 -3.6 -4.49981 | gap 2, overlap 900587 CAGAGCAGCACAAAA GCCA-GC-ATCG GAT CGATCGCGCGGC GTCGCCAGTACGACA TERM 762 900735 - 900699 - G 81 -16.6 -3.16191 | CGAGATCCCGATGAA GATCAGCAGCGGCGTC ATCAG GAAGCCGCCGCCGATC CCGAACATGCCGGAC TERM 763 900889 - 900867 - R 79 -13.4 -3.53012 | TCGCTGTGGCTGAAA GCGCGGATCG CAG CGATCCGGGC AATCCTGAATAACCG RPD_0801 904401 - 900997 - | Sel1 TERM 764 901715 - 901766 + g 86 -18 -2.88544 | gap 1, overlap 901718 GGAATCGCAATCTTG CCGGCGGCGCCCATCCCGGCGCC AGCCTGC GGCGCCGGGAT-GGTGCCGGTGA TGTCTGCGGGTGCGG TERM 765 901718 - 901763 + g 95 -20.5 -2.69468 | gap 1, overlap 901715 ATCGCAATCTTGCCG GCGGCGCCCATCCCGGCGCC AGCCTGC GGCGCCGGGAT-GGTGCCGG TGATGTCTGCGGGTG TERM 766 902101 - 902157 + g 80 -14.4 -3.69621 | gap 1 TGAGCGAATCTTGGA GCCGATGGTGGAGCCCGGTCCGGCCTT GCCG GGGGTCGGGCCGG-CTTTGCCGTCGCC TTTGGACTTGTCGGT TERM 767 902601 - 902583 - G 91 -17.4 -3.64703 | GCGGCGGCAGCGAAA CCGGCGGC GAC GCCGCCGG CTGGGCGGTCACCGG TERM 768 902638 - 902676 + g 76 -14.5 -3.09516 | gap 1 CCTGGCCGGCTCCGG CGCGGGCTGCGGCGCGGC GCGC GCCGCGC-GCAGGTCGCC TTCGATCATCGCCAG TERM 769 902936 - 902960 + g 73 -11.3 -3.68619 | opp_overlap 902934 902933, overlap 902934 ACCCGGCCGAAATCG CCGCTGCCGCG CGG CGTCGCGGCGG TTTCCATCCGTTCCA TERM 770 904626 - 904663 + r 70 -10.4 -3.66497 | opp_overlap 904621 904622 TCCCAATGAAGCGCC GCGCGCGACGCGTCGA GGCTCA TCGGAGCGACCCGCGC TTTCCGGATTTGTTC RPD_0802 905232 - 904684 - | regulatory protein, TetR TERM 771 904805 - 904789 - G 84 -5.7 -4.91109 | overlap 904791 GGCCCAGTATAAAAA CTCCGCC CGT GGCAGCG CTCGCCGACTTTCAA RPD_0803 905534 - 905920 + | hypothetical protein TERM 772 906924 - 906890 - g 84 -17 -3.21099 | GTTCGTGATGATGAA CGAGGCCCGGCTCGGC GTC GCGGTGCAGGGCCTCG CGCAATCCGAGGTCG RPD_0804 906012 - 907802 + | acyl-CoA dehydrogenase-like RPD_0805 907961 - 909169 + | acetyl-CoA acetyltransferase TERM 773 909178 - 909221 + T 95 -18.2 -3.41229 | gap 1, overlap 909175 909179 GGTGTAAGCGTGTCC TCGTAGGGTGGGTTA-GCGCC GAA GGCGCGTAACCCACCCGTCGG TTGTCGTGCGAGTCT TERM 774 909179 - 909220 + T 90 -19.5 -2.64416 | gap 1, overlap 909175 909178 GTGTAAGCGTGTCCT CGTAGGGTGGGTTA-GCGCC GAA GGCGCGTAACCCACCCGTCG GTTGTCGTGCGAGTC RPD_0806 910069 - 909296 - | signal protein RPD_0807 910168 - 912384 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 775 912581 - 912611 + T 95 -11.1 -4.41348 | opp_overlap 912584, overlap 912584 TACGGTTACAAACAA CAAGGGCCGGATC ATCGC GCTCCGGCCCTTC TTTATTTCAGCACAA TERM 776 912608 - 912584 - T 93 -13.5 -4.15703 | opp_overlap 912584 912581 GGTTACAAACAACAA GGGCCGGATCA TCG CGCTCCGGCCC TTCTTTATTTCAGCA TERM 777 912584 - 912608 + T 95 -12.8 -4.32678 | opp_overlap 912584, overlap 912581 GGTTACAAACAACAA GGGCCGGATC ATCGC GCTCCGGCCC TTCTTTATTTCAGCA RPD_0808 913250 - 912636 - | glutathione S-transferase-like TERM 778 913490 - 913476 - g 79 -7 -4.62069 | overlap 913478 GCTGGATCTGAAAAA GGCCGG CTT CCCGCC GCTCGCCTGGTACGA TERM 779 913776 - 913744 - g 100 -12.8 -4.65895 | gap 1, opp_overlap 913767 913772 GCGGCGATCGAAAAA CACGTCGGC-TCGAA ATTG TCCGACGCCGACGCG CTGCGGTTATGCGGG RPD_0809 913300 - 913869 + | MarR family transcriptional regulator TERM 780 914960 - 914976 + G 70 -11.5 -3.35996 | overlap 914954 TGCCGTGGGGCCGGC TGCCGGC GCT GCCGGCG TTCTGGGTCGGGCTG RPD_0810 913963 - 915333 + | glutamate--cysteine ligase TERM 781 915933 - 915908 - g 73 -6 -4.36554 | opp_overlap 915914, overlap 915909 GAGCAGGACAACAAA TGCCGCGCCT GGACCT ATGCGCGGCC GGGCTATGTCGGCCG RPD_0811 915473 - 916027 + | N/apple PAN precursor protein TERM 782 916046 - 916030 - T 77 -15.1 -2.62184 | opp_overlap 916029 916027 916027 CGTGGTGCGATAGCA CGGCGCG TCC CGCGCCG GTGACTTTCGCGCGC RPD_0812 917534 - 916107 - | peptidase U62, modulator of DNA gyrase TERM 783 916391 - 916404 + g 79 -8.1 -4.56597 | CGCCGCCGAAATTCG CGGCA TAGA TGCCG TTTTTCACCGAGGCG TERM 784 917747 - 917720 - R 81 -7.7 -4.4767 | opp_overlap 917720 917721, overlap 917687 917685 917688 917721 917722 GGACGCATGACAAAA CGGGCAGC-CGGG ATAA CCCGTGCCGCC-G CATTTCGTTGAACTG RPD_0813 918428 - 917784 - | invasion associated locus B TERM 785 918674 - 918656 - H 85 -14.6 -3.59583 | AGAAGCATTCTTAAA GGGGATGC GTC GCATCCCC TTCGGAATGAAAAAG TERM 786 918701 - 918689 - H 80 -4.7 -4.8622 | CTTCGGAATGAAAAA GGGCG CTC CGCAC AAGCGGCTTAGCCCT RPD_0814 918743 - 919597 + | cytochrome-c oxidase RPD_0815 919666 - 921291 + | cytochrome-c oxidase TERM 787 921340 - 921309 - f 90 -18.1 -2.83271 | gap 1, overlap 921306 CTATCGCGACAACGA GCATCCGCCGG-GG TTCAT CCGCCGGCGGATGC GGCTCAAACAACAGA TERM 788 921546 - 921587 + G 80 -17.3 -2.78384 | gap 1 CAGTCACCGCGATGC TGTGCATCGCCGTCGGCGGC GGC GCCGCCGGC-GCGCTGAACA TGTGGTACGAAAACG RPD_0816 921365 - 922306 + | protoheme IX farnesyltransferase RPD_0817 922319 - 922480 + | putative CoxF RPD_0818 922495 - 923115 + | cytochrome C oxidase assembly protein TERM 789 923234 - 923276 + G 79 -11.3 -3.96624 | gap 1 TCACGATTATCATCT GGTCGAT-CCGAGCCCGTGG CCGT TCGTCGGCTCGGTATCGGCC TTTGTCATGGCGCTG RPD_0819 923196 - 924050 + | cytochrome c oxidase, subunit III TERM 790 924102 - 924080 - f 74 -14.9 -2.52464 | GCGTTCGCGAAGCCA CCCTCTCCC ACGAG GGGAGAGGG TTGGAGATGCGATGT RPD_0820 924114 - 924506 + | hypothetical protein TERM 791 924946 - 924964 + G 73 -14.6 -2.91681 | GCTCGTCACCGGCCA GCCGGTGA CGC TCACCGGC TATCTGCGCTTCCCG RPD_0821 924503 - 925309 + | putative surfeit 1 RPD_0822 925454 - 926872 + | threonine synthase RPD_0823 926869 - 928158 + | peptidase M16-like RPD_0824 928231 - 928818 + | GCN5-related N-acetyltransferase RPD_0825 928925 - 929587 + | hypothetical protein RPD_0826 930747 - 929785 - | transposase, IS4 TERM 792 930996 - 930973 - R 100 -19.6 -5.5762 | opp_overlap 930973 AGCAAACACAAAAAA GCCGGCGCGA TCGC TCGCGCCGGC TTTTTGAGTTTTTGG TERM 793 930973 - 930996 + r 100 -19.6 -4.92239 | opp_overlap 930973 AGCAAACACAAAAAA GCCGGCGCGA TCGC TCGCGCCGGC TTTTTGAGTTTTTGG RPD_0827 931515 - 931024 - | H+-transporting two-sector ATPase, B/B' subunit TERM 794 931373 - 931405 + g 71 -12.7 -3.29144 | overlap 931369 TTGAGCTTGCGGGCC TCGTCGAGCTCGG CCTTGAT CCGGGCGCGACGA TTGTCGAGGGCCTGC RPD_0828 932078 - 931521 - | H+-transporting two-sector ATPase, B/B' subunit TERM 795 931637 - 931666 + g 71 -12.1 -3.22475 | overlap 931635 TGCCGCGAACGTTGC CCATCGCGGCGGT ACGG GTCGCCGAGATGG TCTTCTCGGCGTCGG RPD_0829 932358 - 932131 - | F0F1 ATP synthase subunit C RPD_0830 933161 - 932409 - | F0F1 ATP synthase subunit A TERM 796 932730 - 932751 + g 81 -5.1 -4.82901 | opp_overlap 932730, overlap 932732 GCCGGACGGTACGAA CAGCTTGAA GAAT TTCAGGCCG TTTTTGTACAAGCCG RPD_0831 933618 - 933232 - | FoF1 ATP synthase, subunit I RPD_0832 933919 - 934542 + | DSBA oxidoreductase RPD_0833 934622 - 935275 + | hypothetical protein RPD_0834 935321 - 935794 + | hypothetical protein TERM 797 935813 - 935846 + T 91 -21.1 -2.7263 | opp_overlap 935813 935818, overlap 935818 CATCGGATCAACAGA CAAAACGGCCGCGGA TCGC TCCGCGGCCGTTTCG CTTTGGCAGGATGGT TERM 798 935846 - 935813 - T 100 -23.3 -3.13371 | opp_overlap 935813 935818, overlap 935818 CATCGGATCAACAGA CAAAACGGCCGCGGA TCGC TCCGCGGCCGTTTCG CTTTGGCAGGATGGT TERM 799 935841 - 935818 - T 100 -19.6 -4.6955 | opp_overlap 935813 935818, overlap 935813 GATCAACAGACAAAA CGGCCGCGGA TCGC TCCGCGGCCG TTTCGCTTTGGCAGG TERM 800 935818 - 935841 + T 100 -19.6 -3.84451 | opp_overlap 935818 935813, overlap 935813 GATCAACAGACAAAA CGGCCGCGGA TCGC TCCGCGGCCG TTTCGCTTTGGCAGG RPD_0835 937555 - 935891 - | general substrate transporter RPD_0836 937871 - 938545 + | LuxR family two component transcriptional regulator TERM 801 938620 - 938602 - T 72 -7.3 -4.21194 | opp_overlap 938602 TCGGATCATTGAAAA GCGCTGG TGAAT CCGGCGC TTTTTTTATTCGGCC TERM 802 938602 - 938620 + T 100 -9.5 -5.7946 | opp_overlap 938602 TCGGATCATTGAAAA GCGCTGG TGAAT CCGGCGC TTTTTTTATTCGGCC RPD_0837 942132 - 938626 - | periplasmic sensor hybrid histidine kinase TERM 803 942224 - 942187 - R 72 -13.4 -2.71325 | opp_overlap 942188, overlap 942184 942183 CTAGCGACAAAGCTA TCGCCACGCGACAGAG ATCTTA CCCTGTTGCGTGGCGT CCTTGCCGAAAATCA TERM 804 942188 - 942223 + r 84 -16.9 -2.71144 | opp_overlap 942184 942183 942187 TAGCGACAAAGCTAT CGCCACGCGACAGAG ATCTTA CCCTGTTGCGTGGCG TCCTTGCCGAAAATC RPD_0838 943494 - 942265 - | 5-aminolevulinate synthase RPD_0839 944770 - 943706 - | beta-lactamase-like TERM 805 944746 - 944756 + g 93 -6.8 -5.21236 | opp_overlap 944731, overlap 944731 CGTCGTGGGGTTTGT CGAC GGC GTCG TTTTTCTTATGCATT TERM 806 944941 - 944914 - R 93 -14.8 -3.96618 | opp_overlap 944916 GGCAAGCGCAAACAA CAGCCGGTGGCG CGCA CGCCGCCAGCTG TCTCCGCGACACCAG RPD_0840 947097 - 944959 - | chemotaxis sensory transducer TERM 807 945911 - 945935 + g 77 -12.2 -3.7108 | gap 1, overlap 945914 945932 GCCATCACCGCGATT TCG-TCGCGGC GGTT GCCGCGATCGA TTTCGGTGTCGAGAT TERM 808 947310 - 947278 - R 100 -20.7 -3.56092 | opp_overlap 947284, overlap 947284 CCATGATCGCTCAAA CAAAAAGGGCCGGCA TAA TGCCGGCCCTTTCCG CCCCCGAAGGGAATT TERM 809 947284 - 947304 + r 95 -18.3 -3.53012 | opp_overlap 947278 947284 TCGCTCAAACAAAAA GGGCCGGCA TAA TGCCGGCCC TTTCCGCCCCCGAAG TERM 810 947304 - 947284 - R 100 -18.3 -5.27335 | opp_overlap 947284, overlap 947278 TCGCTCAAACAAAAA GGGCCGGCA TAA TGCCGGCCC TTTCCGCCCCCGAAG RPD_0841 948066 - 947338 - | putative outer membrane protein TERM 811 948583 - 948625 + G 70 -6.1 -4.26076 | gap 1, opp_overlap 948580, overlap 948568 948606 ACGCTGACATCACGC CTGCTGGCCGCTGCGGCGGT CAGC GCCG-CGCTGTGGGCGGTGG TTTTGCTGGCGATGA RPD_0842 948397 - 948645 + | hypothetical protein RPD_0843 948642 - 949406 + | ABC transporter related TERM 812 949706 - 949721 + G 78 -6 -4.5954 | opp_overlap 949700, overlap 949704 CGAACTCAAGGAGGA CGCCTC GCTG GCGGCG TTTTATCTGGTGTCG TERM 813 949934 - 949967 + G 78 -15.9 -3.15861 | opp_overlap 949908 GCTGTTTTTGCGGAC CGTCAGCCGCGCCGG TGCG CCGGCGCATCTGGCG TTCATGGCGCTGGTG RPD_0844 949410 - 950282 + | hypothetical protein RPD_0845 950286 - 951155 + | periplasmic solute binding protein RPD_0846 951400 - 952461 + | cobalamin synthesis protein, P47K RPD_0847 952458 - 953477 + | WD-40 repeat-containing protein RPD_0848 953506 - 954228 + | MgtC/SapB transporter RPD_0849 954333 - 954671 + | hypothetical protein TERM 814 954700 - 954727 + T 100 -19.2 -5.67283 | gap 1, opp_overlap 954682 954696 954695 GACGACGAAACTCGA TCCGGGC-CGCGC GTC GCGCGAGCCCGGA TTTTTTCTTTGACTT RPD_0850 956188 - 954761 - | homospermidine synthase TERM 815 955102 - 955130 + g 77 -13.9 -3.4072 | opp_overlap 955070 955096, overlap 955076 CGTAGACCAGCACGC CGAGTTCGTCGAT GCC GTCGACGATCTCG TTCTCGTCGAGGATG TERM 816 955846 - 955829 - G 71 -9.1 -3.81488 | CTTGTCGAAATAGAA GCCGAGC CAGG GCTCGAC GACGGTGTCGATGTA TERM 817 956247 - 956275 + r 95 -13.1 -4.3129 | overlap 956248 CTACGGCAACTTCAG GCCCACGGCAACG ATG CTTTGCCGTGGGG TTTTCATAATAACTA TERM 818 956248 - 956274 + r 86 -16.6 -3.18292 | overlap 956247 TACGGCAACTTCAGG CCCACGGCAACG ATG CTTTGCCGTGGG GTTTTCATAATAACT RPD_0851 956719 - 956303 - | transcription elongation factor GreA/GreB region RPD_0852 957201 - 956731 - | hypothetical protein TERM 819 957560 - 957516 - R 82 -10.7 -4.08557 | opp_overlap 957525, overlap 957549 GTGCCTAAACAAGAA GCTAAAGCGGGATGACGATTC GAA GATAAGTCATCCTGCTCTAGC GGAGCGATAACGCGA RPD_0853 957981 - 957592 - | endoribonuclease L-PSP RPD_0854 958241 - 958083 - | hypothetical protein TERM 820 958113 - 958141 + g 86 -18.1 -3.01712 | opp_overlap 958130 TTCGGCTGGGCGGGC TCGCCGCCGGCGC AAA GCGTCGACGGCGA TCTTGACCACGAAGA RPD_0855 958839 - 958252 - | GCN5-related N-acetyltransferase TERM 821 958601 - 958553 - G 100 -20.5 -3.21747 | gap 3 TCACGGCACGACGAA TCGACGGCGAGGGGGCCGAGCACG AGTG CG-GCCCGGCCCCCT-GC-GTCGA CATGCCAAAGACGGA TERM 822 958910 - 958935 + r 81 -10.3 -4.24342 | ATCGTCATGTGACAG GGAGAGGCCGG CAAG CCGGCCTCGAC TTTCTTGCTCCGCAC RPD_0856 960126 - 958984 - | ornithine decarboxylase TERM 823 959812 - 959833 + g 71 -9.4 -3.77553 | opp_overlap 959794 959815, overlap 959794 AATGCCGAGCTCATA GGAGCGCG CGATGT CGCGTTCC TTCTTGATGGTGTTG TERM 824 960812 - 960798 - R 71 -5.6 -4.3739 | opp_overlap 960803, overlap 960800 TACGCGTTCAGAAAA CCCGCG TCG CACAGG CGCAAAGCGCGCGTC RPD_0857 961154 - 960894 - | hypothetical protein TERM 825 961210 - 961195 - H 78 -6.8 -4.57341 | overlap 961197 AATCTCTCTGAAAAA GCTCGC CGCG GCAAGC GAAAGCCCATGGTCC TERM 826 961312 - 961299 - H 81 -4.5 -5.03314 | gap 1, opp_overlap 961299 GCGAGGCGCAAAAAA GC-CCC AAC GGGTGC TATATGTTCGCAATT RPD_0858 961351 - 963441 + | peptidyl-dipeptidase Dcp RPD_0859 963446 - 964099 + | hypothetical protein TERM 827 964265 - 964287 + G 70 -4 -4.46926 | overlap 964266 GCGGCCTGTTCGGCT GGCTGATGGC GCA GCAATCGGCG TTTTATCGTCAGATG RPD_0860 964111 - 965280 + | high-affinity nickel-transporter TERM 828 966294 - 966275 - g 72 -7 -4.23723 | CAAGACCATCGAAAA GCTCGCCA AGGA CGGCGTGC GCAAACTCGCGGTGG hemH 965454 - 966491 + | ferrochelatase TERM 829 966499 - 966544 + F 84 -15.5 -3.28791 | gap 1, opp_overlap 966497 966495, overlap 966499 966540 GGCTGTAGCAAGACG CC-GGCTCTGAGCGACTGGTTC TGA GAGCCAGATGCTGAGAGCCAGG TTCTGAGAGCCAAGT TERM 830 966499 - 966543 + F 77 -15.7 -2.57132 | opp_overlap 966497 966495, overlap 966499 966540 GGCTGTAGCAAGACG CCGGCTCTGAGCGACTGGTTC TGA GAGCCAGATGCTGAGAGCCAG GTTCTGAGAGCCAAG TERM 831 967689 - 967663 - g 74 -12.2 -3.53444 | overlap 967664 CGACCTTCGGCGAAA GCGCGGCCTC GGCGCAG GCGGCCGCGC GCCGCGGCTCAGTGC RPD_0862 966741 - 967751 + | band 7 protein RPD_0863 967782 - 968231 + | hypothetical protein TERM 832 968284 - 968337 + T 100 -19.8 -3.53012 | gap 2, opp_overlap 968251 CGCCGCCGCGCAGCG GCGG-CCTCGAAGGATGAGCCG-CAA GCAC TTGTCGCCGCATCCTTCGAGGCCCGC TTTGGCGGCGGGCGC RPD_0864 969418 - 968408 - | KpsF/GutQ family protein TERM 833 969470 - 969499 + H 72 -12 -3.29043 | ACCCCTTCTAGCATG CCGCCGGACGGG ATGCGA CGCGCCCGGCGG TTGTCCGGAAAGGTT TERM 834 969679 - 969718 + G 81 -16.4 -3.09516 | gap 1, opp_overlap 969676 CGGCGCCAGCAACGG GCCGCCACCGCCGTGCAGC TCT GCTGCG-GGCGGTCGCCGC TTGCCTGCTGACCGG TERM 835 970643 - 970671 + G 78 -10.1 -4.08767 | overlap 970645 CAATCGCCTGCAGGT CACCGCGATCGGC AGC GCCGACCGCAGGG TTTTCCAGCAGTCGC RPD_0865 969657 - 971351 + | hypothetical protein RPD_0866 971461 - 972498 + | hypothetical protein RPD_0867 972835 - 972563 - | hypothetical protein TERM 836 972625 - 972605 - G 74 -12.5 -3.54424 | opp_overlap 972581 972598 CTTGATGCGGCGAAA CCGGACGCC TTT GCCGTCCGG CAGGCGCGTGGCGAT TERM 837 973029 - 973053 + H 72 -4.1 -4.57073 | AGCTTTGGATGGCAT CCCTCGGCC TATGAAT GGCGGCGGG TTTTTCGAACGCGTG TERM 838 973101 - 973074 - g 74 -9.8 -3.87869 | overlap 973079 CGAACGCGTGAGAAA GGAAATCGGCCG GCGA CGGCGGATGTCC GCGCGGCTGCTGATC TERM 839 974508 - 974470 - g 71 -14.7 -2.57881 | opp_overlap 974459, overlap 974469 GAAGCCGCCGACAAG GC-GCTGTATGCGGCCAAG GAT CTTGGCCGCA-ACTGCTGC GTGGTCGCCGCCAGC RPD_0868 973066 - 974550 + | GGDEF domain-containing protein RPD_0869 975974 - 974643 - | 6-aminohexanoate-dimer hydrolase TERM 840 975137 - 975166 + g 79 -8.5 -4.36914 | gap 1 CACTGGCGCGCTGGA CGACCCACGCC-AG CAC CTCGGCGTTGGACG TTTTGTAGGCGAAGG RPD_0870 976911 - 976039 - | UTP-glucose-1-phosphate uridylyltransferase RPD_0871 977973 - 977029 - | alpha/beta hydrolase fold TERM 841 977862 - 977909 + g 77 -7.5 -4.30576 | gap 1, overlap 977860 CGGTACCCTTTCGCC CTGCCGGCGGCGGCCATC-GCG CGAAC CGCAGCTCGGCGCCGTCGGGGG TTTTGATGGTGCCGG RPD_0872 978190 - 978669 + | heat shock protein Hsp20 TERM 842 978704 - 978723 + F 100 -16.4 -5.07486 | CAATCATCGTTCGAA CGCCCCGG GAAA CCGGGGCG TTTTTGTTGGCGGTA TERM 843 979531 - 979547 + G 83 -12.3 -4.09685 | overlap 979523 CTGGCGGTCAGCTTG CCGACCA TGC TGGTCGG TTTTGCCCGGTACAG RPD_0873 978727 - 979746 + | hypothetical protein RPD_0874 980541 - 979801 - | hypothetical protein TERM 844 979976 - 980023 + g 89 -17.6 -3.22884 | gap 1, overlap 979998 GCGGCGTCCTTGCTG GGAGCCACCG-CGGCGGCGGCGT TCG ACGCGGCGGCCGGCGATGGCCCC TTGGTCGATTGCTGC TERM 845 981151 - 981137 - g 79 -11.4 -3.85698 | opp_overlap 981136 981135 981139 CTGTCGCGCGAGAAA GACGCC TGC GGCGTC GGTTTCATCGCCAGC RPD_0875 980981 - 985729 + | glutamate synthase ferredoxin subunit TERM 846 985860 - 985815 - f 71 -9.7 -3.80697 | gap 1, overlap 985817 AGGAAAGCAACAGAA CAGTCATCCTTCGAGGCTCGCC ATG AGCGAGCGCCTCAGGATGAC-G ACCGGAACGAGAATT TERM 847 985859 - 985817 - f 79 -13.4 -3.47516 | overlap 985815 GAAAGCAACAGAACA GTCATCCTTCGAGGCTCGCC ATG AGCGAGCGCCTCAGGATGAC GACCGGAACGAGAAT gltD 985894 - 987348 + | glutamate synthase subunit beta RPD_0877 988312 - 987359 - | anaerobic benzoate catabolism transcriptional regulator TERM 848 988646 - 988667 + G 74 -10.2 -3.86015 | opp_overlap 988651, overlap 988642 GATGATCATGCTCGA CACGATCG ACTTTC CGATCGTG TTTCTCGGCGCGATC RPD_0878 988434 - 989990 + | benzoate-CoA ligase family RPD_0879 990031 - 990852 + | alpha/beta hydrolase fold TERM 849 991541 - 991561 + G 71 -9 -3.7941 | gap 1, opp_overlap 991535 991534 GTCGACAAGCGCAAG GTGCGGCGC GACC GCGCCG-AC TTCTTCTGCACCATC RPD_0880 990962 - 992650 + | enoyl-CoA hydratase RPD_0881 992726 - 994216 + | putative benzoyl-CoA oxygenase component RPD_0882 995273 - 994467 - | short-chain dehydrogenase/reductase SDR TERM 850 994844 - 994887 + g 72 -13.1 -3.14132 | gap 2 TGATCACCTTGCCGG GACGCTCGGCCGTGGCCGCGG CGCG CAGCGGTC-CGGCC-AGCGCC TTGGTCAGGAAGAAC RPD_0883 996531 - 995473 - | polysaccharide deacetylase TERM 851 996716 - 996734 + G 77 -11 -3.8397 | AGATCGAGCGGCCAG TGGTGGCG CGG CGCCATCA TTCTTATCGCTCTAT RPD_0884 996686 - 998080 + | OmpA/MotB TERM 852 998262 - 998286 + G 88 -9.9 -4.32034 | overlap 998260 GCCCGGATCGTTCCC GGTCGCGCCGG TTA CTGGCTCGATC TTTTCCTCGTCATGA RPD_0885 998088 - 998381 + | hypothetical protein RPD_0886 998619 - 999653 + | hypothetical protein RPD_0887 999656 - 1001011 + | ATP-binding region, ATPase-like TERM 853 1001077 - 1001066 - f 74 -5.8 -4.41241 | overlap 1001056 1001076 CAAACCCTCATAAAA GGTC AATC GACC GCCCCTAAAGCGGGC RPD_0888 1001147 - 1002157 + | periplasmic phosphate binding protein TERM 854 1002703 - 1002736 + G 83 -13.2 -3.86015 | GGCGATCGCTATGAC GATCGCGATCCCGG TCGGCC TCGGCATCGCGATC TTTCTCACCGAGCTC RPD_0889 1002392 - 1003393 + | phosphate ABC transporter permease RPD_0890 1003396 - 1004256 + | phosphate ABC transporter permease TERM 855 1004679 - 1004665 - g 76 -6.4 -4.46212 | GGCTGTACGAGAAAA TCTCCA AGT CGGAGA TGGACGGCCGGGTCG TERM 856 1004700 - 1004718 + G 78 -13.8 -3.53444 | opp_overlap 1004700 1004699 GGCCGGGTCGAGAAG GCGCTGCG CAG CGCGGCGC TTTGGAACGAGGTCA RPD_0891 1004253 - 1005077 + | phosphate ABC transporter permease RPD_0892 1005103 - 1005819 + | phosphate uptake regulator, PhoU RPD_0893 1005874 - 1006575 + | winged helix family two component transcriptional regulator RPD_0894 1007442 - 1006930 - | GcrA cell cycle regulator TERM 857 1007618 - 1007597 - H 81 -6.5 -4.77629 | overlap 1007608 AAAAGGAATACAAAA CGCGCACGA GATG TCGTACCCG ACAGCCAAAACGCTA TERM 858 1007795 - 1007818 + H 100 -18.2 -4.06055 | opp_overlap 1007787 1007795 CCTAGAATGACTACA CGTGCCGCCT GGAA AGGCGGCACG TTTCGTTTCCGGGGT TERM 859 1007818 - 1007795 - H 90 -18.2 -2.87963 | opp_overlap 1007795, overlap 1007787 CCTAGAATGACTACA CGTGCCGCCT GGAA AGGCGGCACG TTTCGTTTCCGGGGT TERM 860 1007875 - 1007859 - H 76 -9.3 -4.05033 | opp_overlap 1007860 GCGACCGCAGAGAAA GCGGCCG GCC CGGCTGC CCGTTTTCCGATCGG TERM 861 1007860 - 1007878 + H 72 -8 -4.14243 | opp_overlap 1007859 CGACCGCAGAGAAAG CGGCCGGC CCG GCTGCCCG TTTTCCGATCGGATC argD 1007898 - 1009109 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein RPD_0896 1009109 - 1010059 + | ornithine carbamoyltransferase TERM 862 1010154 - 1010108 - f 91 -18.6 -3.06796 | opp_overlap 1010149 1010150 CCTGAGCGCAGCGAA GGCGGGTGAGGGGCCGGCACAG CGC CCGCGCCCACCCCTCATCCGAC GCGGACTGCGTCCGC hslO 1010279 - 1011292 + | Hsp33-like chaperonin TERM 863 1011409 - 1011376 - T 84 -16.1 -3.01712 | gap 1 GTCTCGCCGCCAAGA TGGTGGGTTACGGCGC TCC GCGCC-TAACCCACCC TACGGCGCGCTCAGC apaG 1011855 - 1011433 - | ApaG TERM 864 1013334 - 1013344 + G 83 -3.2 -5.1861 | CATCATCATGTCGGC GTCA GCA TGGC TTTTTTCGTGGTACA TERM 865 1013413 - 1013393 - g 89 -5.3 -5.15969 | GCGGAAGTCAAAAAA CAAGCCCGG ATG CCGATCTCG CGGGGGGCGACGCAT RPD_0899 1011976 - 1013430 + | putative OpgC protein RPD_0900 1013427 - 1014206 + | hypothetical protein RPD_0901 1014242 - 1015153 + | lipolytic enzyme, G-D-S-L RPD_0902 1016030 - 1015170 - | ErfK/YbiS/YcfS/YnhG TERM 866 1016132 - 1016101 - R 81 -15.9 -3.0263 | overlap 1016119 ATGATGCGGGGAAGA CGTCATGGCCGGG AACAAG CTCGGCCATGACG GGCGTGATAGCGGAA RPD_0903 1017429 - 1016203 - | O-succinylhomoserine sulfhydrylase TERM 867 1017502 - 1017475 - H 100 -6.9 -5.60993 | gap 1, opp_overlap 1017495 1017498 GCGGGCACAAAAAAA CCGGCCTG-GGG ATCAA CCCTCGAGCCGG GATCACACTGTCCCC RPD_0904 1017635 - 1018801 + | 2'-deoxycytidine 5'-triphosphate deaminase TERM 868 1018903 - 1018859 - T 85 -14.3 -3.60419 | overlap 1018860 ATGCTCAAACTAGAA CCTGGAGCAGGATGACGATTC GAA GATAAGTCATCCTGCTCCAGC CGCCGCCTCCGGATC TERM 869 1018902 - 1018860 - T 86 -17.8 -2.75769 | overlap 1018859 TGCTCAAACTAGAAC CTGGAGCAGGATGACGATTC GAA GATAAGTCATCCTGCTCCAG CCGCCGCCTCCGGAT RPD_0905 1020950 - 1018962 - | twin-arginine translocation pathway signal RPD_0906 1022558 - 1021215 - | L-sorbosone dehydrogenase TERM 870 1023442 - 1023492 + G 74 -8 -4.16921 | opp_overlap 1023451 1023452, overlap 1023443 ATCGGGATGCAGTAT TACGACGAACTCGCGCCGGGTCTC GGC GAGACCGGGCGGGACGTCGCCGGC TTTTCGCGGTTGTTG TERM 871 1023482 - 1023452 - g 74 -15.4 -2.53894 | opp_overlap 1023443 1023442, overlap 1023451 AGTATTACGACGAAC TCGCGCCGGGTCTC GGC GAGACCGGGCGGGA CGTCGCCGGCTTTTC RPD_0907 1022707 - 1023741 + | hypothetical protein RPD_0908 1023877 - 1025328 + | multi anti extrusion protein MatE RPD_0909 1025901 - 1025314 - | methylated-DNA--protein-cysteine methyltransferase RPD_0910 1028204 - 1026510 - | filamentation induced by cAMP protein Fic RPD_0911 1028482 - 1028628 + | hypothetical protein RPD_0912 1029391 - 1028726 - | hypothetical protein TERM 872 1029609 - 1029588 - R 100 -18.7 -4.86731 | opp_overlap 1029582 1029577, overlap 1029566 TTGGCTCAAACAAAA GCGCCGGGC CAAG GCCCGGCGC TGATGATCAGTTCAC RPD_0913 1030163 - 1029642 - | hypothetical protein RPD_0914 1032638 - 1030347 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding RPD_0915 1033665 - 1032793 - | molybdopterin dehydrogenase, FAD-binding TERM 873 1033208 - 1033231 + g 70 -10.2 -3.65046 | ACGCCGTCCATCGCG GCGCAGCCCG AGCC CGGATTGCGC TTGTTGCAATCCGCG RPD_0916 1034371 - 1033670 - | twin-arginine translocation pathway signal TERM 874 1035791 - 1035736 - g 100 -20.5 -3.78934 | gap 2 CCCGTTCGAGAAGAA CGTCCC-CGGCATCGGCGT-CGGCCGC GACG GCTGTCGCACGCCGATGCAGTGGGACG CCTCGGCCAATGCCG RPD_0917 1034576 - 1036204 + | alpha amylase, catalytic region RPD_0918 1036448 - 1036690 + | hypothetical protein RPD_0919 1038238 - 1036931 - | hypothetical protein RPD_0920 1038980 - 1038627 - | PRC-barrel TERM 875 1039233 - 1039271 + H 91 -15.3 -3.89346 | gap 1, overlap 1039238 GAACCAGCGAGTTTA CGA-GGGGCGCGTCGGCG GCAA CGTCGGCGCGCCTTGTCG TTTGTCGCCTCGGCA TERM 876 1039238 - 1039265 + H 100 -18.4 -3.64915 | overlap 1039233 AGCGAGTTTACGAGG GGCGCGTCGGCG GCAA CGTCGGCGCGCC TTGTCGTTTGTCGCC RPD_0921 1039866 - 1040324 + | hypothetical protein TERM 877 1040350 - 1040387 + T 77 -14.9 -2.90496 | gap 1, opp_overlap 1040347 1040348 1040357, overlap 1040347 1040349 1040355 CCTCGAGAGTAACCT CGCAAGAGCGGGCTTCCC TTC GGGCGGTCCGCTCTT-CG TCATTTGGACCAGAC TERM 878 1040355 - 1040383 + T 82 -14.5 -3.32769 | opp_overlap 1040347 1040348 1040357, overlap 1040347 1040350 1040349 AGAGTAACCTCGCAA GAGCGGGCTTCCC TTC GGGCGGTCCGCTC TTCGTCATTTGGACC RPD_0922 1041697 - 1040486 - | putative transmembrane protein RPD_0923 1041931 - 1042521 + | cytochrome B561 RPD_0924 1043493 - 1042762 - | HhH-GPD TERM 879 1043270 - 1043218 - G 81 -16.2 -3.09516 | gap 1 CGCCGCATGATCGAA CGG-GTCGAACGCCGCGCCGACCCG ACCC CAGATCGCCGCCGCGCTCGCCACCG ACAATTGCTGACCGC RPD_0925 1043563 - 1044444 + | glutamyl-Q tRNA(Asp) synthetase TERM 880 1044662 - 1044617 - gT 73 -10.9 -3.61398 | GCGCGCCCGCAAGAA GGCCGACGCCCCCGGCATGGT CGAG ACCGCGCTGGCGGCGTTCGCC CATGAAGTGCGCACG TERM 881 1045640 - 1045670 + GT 77 -13.8 -3.27298 | CCGCGATCACGACGA GGCGGCGGCGCGCG AGG CGGGCGCCGACGGC TTCCTGCTTAAACCG RPD_0927 1046571 - 1045678 - | ribonuclease BN RPD_0926 1044540 - 1045751 + | histidine kinase RPD_0928 1046664 - 1046903 + | hypoxia induced protein region RPD_0929 1046958 - 1047530 + | ATP RPD_0930 1047635 - 1048384 + | electron transfer flavoprotein beta-subunit RPD_0931 1048384 - 1049334 + | electron transfer flavoprotein, alpha subunit TERM 882 1049340 - 1049383 + F 76 -8 -4.32649 | opp_overlap 1049337, overlap 1049342 1049354 CGGCAAGTAAACGCC GGATTGCGGACGGATCCGGC TGCG GCCGGGTCCGTTGCCAAAGC TTTAGTTTTTACCGT RPD_0932 1049443 - 1050381 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 883 1050399 - 1050363 - f 72 -12.3 -3.29144 | gap 1 TTATCGGGGCGACAA GCCGATC-CCGACCCG CTGAGC CGGGTCAGCGTTCGGC GACCGAAAACCAGCA RPD_0933 1050538 - 1050738 + | hypothetical protein RPD_0934 1051110 - 1050754 - | hypothetical protein TERM 884 1050872 - 1050888 + g 71 -9.4 -3.87373 | TTCGCCATCACCCGG TCGCGC TGCTT GCGCGA TTTGTAGACGATGTA RPD_0935 1051895 - 1051227 - | thioredoxin-like RPD_0936 1051991 - 1053388 + | argininosuccinate lyase RPD_0937 1053481 - 1053732 + | hypothetical protein TERM 885 1053809 - 1053822 + G 79 -4.5 -4.73613 | gap 1, overlap 1053763 CGTCGATCGCGCAGG CGGTCG GCA CG-CCG TTTTATTGCTACTCC RPD_0938 1053739 - 1055004 + | diaminopimelate decarboxylase RPD_0939 1055616 - 1055236 - | carboxymuconolactone decarboxylase TERM 886 1056237 - 1056207 - g 77 -12.5 -3.72576 | gap 1, overlap 1056190 1056208 CTGGCGGCGATCAAA GGCGTCAGCGCCGG ATTG CCGGCGCCG-CGGC TGCCGAAGCACGACC TERM 887 1056840 - 1056866 + G 77 -13.6 -3.60296 | overlap 1056839 CAGAACTCCGATACG CCGCGGCCGCTC TAT GAGCCGCCGCAG TTTGCGCTGACGCTG TERM 888 1057198 - 1057255 + G 82 -17.1 -2.95298 | gap 2 TCGGCCTCTATACCG TTGCCGACCAGCTCGAGC-GCGCG-CG CACCGA CGACGCGCTGCGCGAGGTCGTCGGCAA TCTCTGGTCACTCGC TERM 889 1057322 - 1057310 - g 78 -10.5 -4.11394 | overlap 1057311 ATCGGACGTCGAAAA GGCGC TGC GCGCC GCGCAGGACGCGCTG RPD_0940 1055775 - 1058330 + | hypothetical protein RPD_0941 1058888 - 1058511 - | response regulator receiver RPD_0942 1059833 - 1058952 - | Zinc finger/thioredoxin putative TERM 890 1059361 - 1059416 + g 91 -16 -3.9243 | opp_overlap 1059338, overlap 1059363 1059399 AGCGCCAGCGCGCCG AACGCGGCGCAGGCGGTCGAGGCGGT CAAC ACCGACTTGATCGCCCGCACCGGGTC TTCTTTGAGAGGTTG TERM 891 1059363 - 1059414 + g 95 -18.6 -3.54755 | opp_overlap 1059338, overlap 1059361 1059399 CGCCAGCGCGCCGAA CGCGGCGCAGGCGGTCGAGGCGGT CAAC ACCGACTTGATCGCCCGCACCGGG TCTTCTTTGAGAGGT RPD_0943 1059977 - 1060636 + | ABC transporter related RPD_0944 1060629 - 1061609 + | hypothetical protein TERM 892 1061677 - 1061713 + F 74 -2.1 -4.95302 | opp_overlap 1061677, overlap 1061651 TCGCCAGAAAACGAA CGCGAGTCGGTTTCATC GTC GACGAATCAGAGTCTCG TTTTCTTCTGTTTGC RPD_0945 1061855 - 1062580 + | hypothetical protein TERM 893 1062591 - 1062603 + F 73 -6.3 -4.31379 | ACTGACCGGATTTGT TCGAT GAC ATCGA TTTTCGTGCGTTCGT RPD_0946 1062594 - 1063403 + | phospholipid/glycerol acyltransferase RPD_0947 1064153 - 1063575 - | ChaC-like protein TERM 894 1064445 - 1064482 + G 73 -14.2 -3.14878 | gap 3, overlap 1064457 GGTCGACCGCATCGT CGACGCCTGGCGCGCGCGC GAG GCG-GC-CGCCGGGCG-CG TGTTCGATTGCGGCG RPD_0948 1064314 - 1065507 + | hypothetical protein RPD_0949 1067354 - 1065732 - | ABC transporter related TERM 895 1067509 - 1067461 - R 100 -24.7 -3.14132 | overlap 1067466 GCGCTTGCGCAGCAA GCGAACCCGGAATCCCGAGATGC CCT GAACCTCTGGATTCCGGGCTCGC GCTGCGCGCGCCCCG TERM 896 1067504 - 1067466 - R 91 -18.2 -3.20723 | overlap 1067461 TGCGCAGCAAGCGAA CCCGGAATCCCGAGATGC CCT GAACCTCTGGATTCCGGG CTCGCGCTGCGCGCG RPD_0950 1068530 - 1067544 - | arginase RPD_0951 1069729 - 1068569 - | hypothetical protein TERM 897 1068688 - 1068667 - G 74 -5.1 -4.57341 | gap 1, overlap 1068668 1068669 AACTCTTGTGAAAAA CGTTGGCGTC CGC GACGCCGA-G CACCGCGGTCGTGGC RPD_0952 1072277 - 1069761 - | glycogen/starch/alpha-glucan phosphorylase TERM 898 1069900 - 1069946 + g 82 -16.5 -3.22774 | gap 1 AGGATGCCGGCGCGG GTCCAG-GCGGAGCCGGCGCGC CAGC GCGCGTCGATGCCGCGCTGGGC TTCGTAGTAGCTGTC TERM 899 1072116 - 1072082 - G 82 -12.1 -3.90744 | CCTTTTCCGAAACAA GCCAGCGGTGCACGA TGCGG TCGCGCAGCGCCAGC GCCGAGGCTTTGTAC TERM 900 1072535 - 1072567 + H 91 -9.7 -4.59773 | overlap 1072536 TGCGACTTCCGGCTC GCCGCGTCGATCTCG CTG CGAGAGCCGCGCGGA TTTTTGCAAATAGAA TERM 901 1072536 - 1072566 + H 74 -13.2 -3.35542 | overlap 1072535 GCGACTTCCGGCTCG CCGCGTCGATCTCG CTG CGAGAGCCGCGCGG ATTTTTGCAAATAGA TERM 902 1073049 - 1073008 - g 75 -9.5 -4.07885 | gap 4 GATTCTCGCTGAAAA GCGCG-GCCTGCTGACGCCGG AGAA CCG-CGCC-GC-GGCGCGCGC CAGGATCGAAGAGAC RPD_0953 1072619 - 1073110 + | hypothetical protein TERM 903 1073210 - 1073164 - T 81 -13.9 -3.54424 | gap 2, opp_overlap 1073128 1073158 1073164 1073207 GCGCAGCTCGCGAAA CCCGGAATCCCGAGATGCTCTGG ATG CCTGAAC-T-TCGAGATTCCGGG TTTGCTCGCTTTGCG TERM 904 1073164 - 1073210 + T 71 -9.5 -3.82097 | gap 2, opp_overlap 1073164, overlap 1073128 1073158 1073207 GCGCAGCTCGCGAAA CCCGGAATCCCGAGATGCTCTGG ATG CCTGAAC-T-TCGAGATTCCGGG TTTGCTCGCTTTGCG RPD_0954 1074062 - 1073259 - | hypothetical protein TERM 905 1073601 - 1073622 + g 70 -6.6 -4.2349 | gap 1 GCAGTCGGCCTTCAG CGCCTTGCG ATAGG CG-AAGGCG TTTTCGCTGTCGGCA TERM 906 1073936 - 1073881 - G 100 -18.8 -4.42806 | gap 1, opp_overlap 1073894 1073902 1073903, overlap 1073877 1073882 GGATCGGCAAAGAAA CTCGCCTGCGCCGGCGCGCTGC-GCTG TTG CGGCCGCTGCGGGCCGGCGCCGCCGAA CAGCATTTCGAGGAT TERM 907 1073935 - 1073882 - G 100 -20.1 -3.25202 | gap 1, opp_overlap 1073894 1073902 1073903, overlap 1073877 1073881 GATCGGCAAAGAAAC TCGCCTGCGCCGGCGCGCTGC-GCTG TTG CGGCCGCTGCGGGCCGGCGCCGCCGA ACAGCATTTCGAGGA TERM 908 1074194 - 1074173 - R 76 -7.3 -4.258 | opp_overlap 1074157 1074156 TCAGCGATTAAGAAA CTCGCTG GCCTTGTA CAGCGAG CGGAATGGCAGCCCG pyrE 1074721 - 1074158 - | orotate phosphoribosyltransferase TERM 909 1074362 - 1074376 + g 72 -11.4 -3.53761 | overlap 1074355 GACGCACCGCTTGCC GGCGAG GCT CTCGCC TTTCGCCAGCCCTTC TERM 910 1074674 - 1074624 - G 77 -7.4 -4.37554 | gap 1, opp_overlap 1074631 1074656, overlap 1074620 1074625 AAATTGAAATAGAAA TCGCTCTTGCGGCCGGAGGCCAG CGTGAT CTCGCCGC-GGCCGAATGAGCGG TTGCGGATGATGTCG TERM 911 1074792 - 1074757 - R 74 -14.6 -2.52543 | gap 1, opp_overlap 1074755, overlap 1074776 ACCGGCCGCAATCTA GCCGCCG-GCCGCGAGC GAA GCCAGCGGCGCGGTGGC GGTATTCGCGGTTGA RPD_0956 1078141 - 1075040 - | DNA polymerase I TERM 912 1077019 - 1077044 + g 71 -14.7 -2.52543 | CCGATTGCTGCGCGC TCCCTCTCCCG CTTG CGGGAGAGGGC TGGGTTGAGGGCACT RPD_0957 1078286 - 1078879 + | hypothetical protein TERM 913 1078944 - 1078912 - T 93 -14.1 -4.10657 | overlap 1078913 TGACATTCCGCAAAA GCGAATGGCCGGAGC GGA ACCCCGGCCATCCGA ATAGCACCACCGCTT TERM 914 1078943 - 1078913 - T 88 -17.6 -3.06073 | overlap 1078912 GACATTCCGCAAAAG CGAATGGCCGGAGC GGA ACCCCGGCCATCCG AATAGCACCACCGCT TERM 915 1079009 - 1078951 - T 84 -16.9 -2.75074 | gap 2, overlap 1079007 GCCATCCGAATAGCA CCACCGCTTTGTCATTCCGGGCTCGCGCG TTC CGCGCGC-CCCGGAATGACAGAA-GATAG CTCGGCTTACGCGAA RPD_0958 1081850 - 1079016 - | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase RPD_0959 1086856 - 1081847 - | pyruvate flavodoxin/ferredoxin oxidoreductase-like TERM 916 1083937 - 1083959 + g 70 -6.3 -4.1899 | gap 2, opp_overlap 1083939, overlap 1083937 1083939 CGCTGACCGAATACA GA-CC-GCCGG TGC CCGGCTGGCTC TTTTCCATCGCATCG TERM 917 1084152 - 1084201 + g 76 -15 -3.18383 | gap 1, overlap 1084164 ATCGCCTCACTCAGG CTCGGCA-CCTGGCCGCGCAGCG CTTCC TGCTGCGCGGGCGCGATGTCGAG TTGCTGGATCGCGGT TERM 918 1085477 - 1085510 + g 80 -15.3 -3.29461 | gap 1 CAGCTTGTCGAGCGC CGG-GATGCCGGCATG ACG CACGCCGGCGTCGCCG TTCTCGCGCGCCTTG RPD_0960 1087300 - 1087869 + | hypothetical protein TERM 919 1088085 - 1088075 - f 81 -4 -5.05782 | overlap 1088081 ACTGATCTTAAAAAA CAAA CTC TTTG ACCGAGCTGTGGTCT RPD_0961 1088152 - 1089153 + | hypothetical protein RPD_0962 1089503 - 1090294 + | molybdate transport repressor RPD_0963 1090327 - 1091097 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 920 1091286 - 1091311 + G 71 -14.7 -2.52516 | opp_overlap 1091272 1091271 1091286 1091285 1091283, overlap 1091285 GCGCCCTGGAAAGAG GGCGTCGCCGC GGTG GTGGCGATGCC GTTGGTGCTGCCGCC RPD_0964 1091145 - 1091834 + | molybdate ABC transporter permease RPD_0965 1091831 - 1092961 + | molybdate ABC transporter ATP-binding protein RPD_0966 1093118 - 1093732 + | hypothetical protein RPD_0967 1094670 - 1093705 - | hypothetical protein TERM 921 1094873 - 1094855 - H 73 -8.9 -4.07885 | TATCGGGCGTGAAAA TCACGTG ATAGA CACGTGA AAAATGCTATTCTGA RPD_0968 1094912 - 1096666 + | TPR repeat-containing protein TERM 922 1096667 - 1096678 + F 100 -5.8 -5.51046 | opp_overlap 1096667 TTTCTGCCGAACTGA TCGG CGAA CCGA TTTTTTATGTCTTTG TERM 923 1099955 - 1100006 + G 100 -19.4 -3.32022 | gap 1, overlap 1099958 GCGGTGGGACTGGGT CGACGCCGCGCTCGACGGCCGCGAC GAC GTCGCCGCCGCTGA-CGCCGCGTTG TTCGTCTATGGCCGC TERM 924 1099958 - 1100003 + G 95 -17.5 -3.80018 | gap 1, overlap 1099955 GTGGGACTGGGTCGA CGCCGCGCTCGACGGCCGCGAC GAC GTCGCCGCCGCTGA-CGCCGCG TTGTTCGTCTATGGC RPD_0969 1096707 - 1101167 + | cytochrome P450-like RPD_0970 1102207 - 1101431 - | hypothetical protein TERM 925 1102064 - 1102080 + g 83 -2.9 -5.20154 | overlap 1102063 1102062 GATTCCGGTCACCTT GACCGAT CCG GTCGCTC TTTTTTGCGTTGTGT TERM 926 1102519 - 1102536 + G 73 -4.1 -4.67982 | gap 1, overlap 1102519 1102520 AAGCGCCGAGGATGA T-CGGCGT CGC GCGCCGCA TTTTGTTCCGTCAGG RPD_0971 1102365 - 1102943 + | sigma-70 region 2 RPD_0972 1102940 - 1103692 + | hypothetical protein TERM 927 1103787 - 1103762 - T 91 -16.2 -3.54307 | AACAGTCTTTGCAAA TCGCGCCTCG TCATCC CGAGGCGCGA GCGCAGCGAGCCTCG RPD_0973 1104619 - 1103885 - | hypothetical protein TERM 928 1104043 - 1104064 + g 70 -10.9 -3.53811 | gap 1 GCGGCGGGCCGCTAT CTGCGACGCG CGT CGCGT-GCAG TTTGCGGCCGATCGC RPD_0974 1105054 - 1104767 - | hypothetical protein RPD_0975 1106032 - 1105259 - | hypothetical protein RPD_0976 1107099 - 1106128 - | 2-nitropropane dioxygenase, NPD RPD_0977 1107872 - 1107234 - | hypothetical protein TERM 929 1107624 - 1107675 + g 95 -20.2 -2.71144 | overlap 1107599 GGCGGGGTCAGGCGT CTTGTCGGCGCTGCTATCCGGCTT GACG AAGTCGGGCAGCAGCGACGACGGG TCCTTCAGCAGCCTG RPD_0978 1108497 - 1107916 - | DedA family protein RPD_0979 1108987 - 1108568 - | phosphoribosyl-ATP pyrophosphohydrolase TERM 930 1109073 - 1109052 - R 86 -15.1 -3.60792 | overlap 1109030 TTGGCAAGGGCGAAA GGCCGCACC GCCG GGCGCGGCC TGACCTGTCGGGGAT RPD_0980 1109492 - 1109088 - | hypothetical protein TERM 931 1109304 - 1109259 - G 77 -13.1 -3.54741 | gap 1, opp_overlap 1109265 GATGATGCCGGCAAA GGC-CGCCGCCGCTGCGGCGTT GCC ACCGCCGCCGCCGCGCCGCACC GCACGTCGCTTCCGC RPD_0981 1110622 - 1109663 - | oxidoreductase-like TERM 932 1110530 - 1110568 + g 70 -10.3 -3.72576 | opp_overlap 1110532, overlap 1110532 1110533 CCCGATCAGCGACAC CACCTCGACGCCGTCGA TGTTC TTGATGCCGTCGAGATG TTTGATACCGAACGC TERM 933 1110602 - 1110581 - G 76 -15.1 -3.1247 | opp_overlap 1110578 1110600 ATGTTTGATACCGAA CGCGCCCGC ACCC GCGAGCGCG ACCTTGATCGCTTTG RPD_0982 1111478 - 1110624 - | protocatechuate 4,5-dioxygenase subunit beta RPD_0983 1111867 - 1111478 - | protocatechuate 4,5-dioxygenase subunit alpha RPD_0984 1112912 - 1111929 - | amidohydrolase 2 TERM 934 1112776 - 1112804 + g 78 -15.3 -3.15544 | overlap 1112757 TCGACGGCGCCCGCC GGCGCCTTGAAGC GTG GCTTCGAGGGGCC TTGGTACCAGTCGAG TERM 935 1112886 - 1112944 + g 86 -17.6 -3.05384 | gap 3 CTCCCCCTTGCGGGG -AGG-GGTC-GGGTGGGGGTCCGCGAG CACTGCGA CTCGCGGACCCCCACCCCGGCCTCCGC TTCGCTCGGCCGACC RPD_0985 1113232 - 1113020 - | putative dehydrogenase RPD_0986 1113927 - 1113232 - | hypothetical protein RPD_0987 1114970 - 1113942 - | amidohydrolase 2 RPD_0988 1116143 - 1114980 - | hypothetical protein TERM 936 1115312 - 1115344 + g 74 -7.6 -4.17425 | gap 1, opp_overlap 1115295, overlap 1115304 TGCGGGTCGCGATGC TGCCGCCGG-CGCGC GGCG GCGCGATCAGCGTCA TTTTCGGATAGTTCT TERM 937 1116068 - 1116045 - G 72 -4.4 -4.56597 | gap 1, overlap 1116047 GGCTGCGTTGAAAAA CG-GGCCGCGC GAA GTGCCGCCGCG CATGAACAGGCAGGG RPD_0989 1117148 - 1116246 - | LysR, substrate-binding RPD_0990 1118171 - 1117173 - | twin-arginine translocation pathway signal TERM 938 1117453 - 1117489 + g 81 -7.9 -4.65895 | gap 1, overlap 1117455 ACGTCCGGCGTGATC TTCGAGCGC-AGCGGC CCCGAC GCCGCCAGCGCGCGGA TTTTTCCGTCGGCGA RPD_0991 1118359 - 1119522 + | NADH:flavin oxidoreductase/NADH oxidase TERM 939 1119568 - 1119599 + T 89 -14.5 -3.91434 | GATGCTGTCTCTCAA TCGTCATGGCGGG GACAAG CCGGCCATGACGA TTTGTCAGATGGTTT RPD_0992 1119992 - 1119621 - | hypothetical protein TERM 940 1120143 - 1120097 - g 75 -13.7 -3.27259 | gap 2, opp_overlap 1120101, overlap 1120098 TACAGAGATCATTAA CGGCGCCCTGACGGCGCCGCGCA GTC CGCGCGGCGCCGTCAGC-CAT-G TATCAACCACTGTCG TERM 941 1120101 - 1120141 + G 86 -18.2 -2.87683 | opp_overlap 1120097 1120098 GAGATCATTAACGGC GCCCTGACGGCGCCGCGC AGTCC GCGCGGCGCCGTCAGCCA TGTATCAACCACTGT TERM 942 1120167 - 1120209 + G 70 -12 -3.41745 | opp_overlap 1120176 1120194 1120197 ACTGTCGATCAGCCC GCCAGAGCATCGGTTCTGAT ACA ATCAGAACCGAAGCTCGAAC TTGATGTTCTGACGC TERM 943 1120200 - 1120176 - g 74 -15.9 -2.62396 | opp_overlap 1120167, overlap 1120194 1120197 CAGCCCGCCAGAGCA TCGGTTCTGAT ACA ATCAGAACCGA AGCTCGAACTTGATG RPD_0993 1119993 - 1120271 + | hypothetical protein RPD_0994 1122260 - 1120290 - | chemotaxis sensory transducer TERM 944 1123069 - 1123031 - R 82 -14.5 -3.27259 | gap 2, opp_overlap 1123035 TACAGAGATCATTAA CGGCGCCCTGCCG-C-GCG CCG CGCAGTCGGCGCGGCGCCG TCAGCCATGTATCAA RPD_0995 1125094 - 1123124 - | chemotaxis sensory transducer TERM 945 1123996 - 1124026 + g 75 -3.1 -4.72272 | gap 1, overlap 1123996 1123997 AGGCGATGCGGTCCT GCT-GCGCCTTGGC CTCG GCTTCGGCGCGGGC TTTTTCCTCCGCCAC TERM 946 1124347 - 1124371 + g 73 -12.2 -3.36273 | gap 1, overlap 1124348 1124351 CCGGTTCGATCGCGG C-GAAGGCGGC CGAG GCCGCCTTCTG TTCCTGTTCGAACGA TERM 947 1124348 - 1124369 + g 80 -15.9 -3.25073 | overlap 1124347 1124351 CGGTTCGATCGCGGC GAAGGCGGC CGAG GCCGCCTTC TGTTCCTGTTCGAAC TERM 948 1124351 - 1124366 + g 79 -11.8 -3.76169 | overlap 1124348 1124347 TTCGATCGCGGCGAA GGCGGC CGAG GCCGCC TTCTGTTCCTGTTCG RPD_0996 1125728 - 1126186 + | hypothetical protein RPD_0998 1128952 - 1126892 - | glycosyl transferase family protein RPD_0997 1126348 - 1126947 + | electron transport protein SCO1/SenC TERM 949 1128159 - 1128103 - Gf 70 -12.9 -2.90212 | gap 3 CCACCACGGTATAGA TC-GGCAGCGTCGCGTCG-GGCCGCCGC CGCA GCGGCCGCTGCGCCGCG-CGCGGCCAGA AGCACGCCGCCAGTC RPD_0999 1129029 - 1129943 + | extracellular solute-binding protein TERM 950 1130318 - 1130296 - g 73 -10.6 -3.62522 | overlap 1130297 1130299 CAACGTGCCGAACAA GGAGATGCTG GCG CAGCATCTCG GCAAGTCGCTGACCA TERM 951 1130547 - 1130563 + G 73 -13.7 -3.1637 | TGCGCGAGGAGCGCG CGGCGAG CTA CTCGCCG TTCCTGCCGGTGTGT lysK 1129985 - 1131622 + | lysyl-tRNA synthetase TERM 952 1131650 - 1131697 + F 74 -14.2 -2.53271 | opp_overlap 1131642 1131639, overlap 1131642 1131649 1131647 CAATGTAGCTCACCC GAGTCGGTGCGCTATTCACGAT ATGA GTCGTGAGTGGCGCGCTGATAC CTGTTATCACGCTCG RPD_1001 1131912 - 1132166 + | hypothetical protein TERM 953 1132300 - 1132245 - T 93 -13.4 -4.14013 | gap 1, opp_overlap 1132255, overlap 1132247 1132248 1132250 1132286 GAAAACGCGTCAAAA CATCAGACTGGA-GCTTCGGTTCTGAT TCA ATCGGAACCGAAGCCTCAAGTCCGCGG CGTGTCGGCCGGATC TERM 954 1132298 - 1132247 - T 85 -14.6 -3.65832 | gap 1, opp_overlap 1132255, overlap 1132245 1132248 1132250 1132286 AAACGCGTCAAAACA TCAGACTGGA-GCTTCGGTTCTGAT TCA ATCGGAACCGAAGCCTCAAGTCCGC GGCGTGTCGGCCGGA TERM 955 1132297 - 1132248 - T 86 -18.1 -2.78776 | gap 1, opp_overlap 1132255, overlap 1132247 1132245 1132250 1132286 AACGCGTCAAAACAT CAGACTGGA-GCTTCGGTTCTGAT TCA ATCGGAACCGAAGCCTCAAGTCCG CGGCGTGTCGGCCGG TERM 956 1132295 - 1132250 - T 87 -17.1 -2.93623 | gap 1, opp_overlap 1132255, overlap 1132248 1132247 1132245 1132286 CGCGTCAAAACATCA GACTGGA-GCTTCGGTTCTGAT TCA ATCGGAACCGAAGCCTCAAGTC CGCGGCGTGTCGGCC RPD_1002 1133329 - 1132406 - | secretion protein HlyD RPD_1003 1136118 - 1133479 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 957 1134175 - 1134207 + g 71 -9.3 -3.86015 | gap 2 CGCCAGAAAACGCTC CAGC-CGGCGA-ATC CGCTC GATCTCGCCGAGCTG TTTCTCGACGCGGTC TERM 958 1135022 - 1134980 - G 72 -11.4 -3.53091 | gap 3, overlap 1134981 ATGCGTTGGCCGAAA TCG-C-CGTCGCCGAGCCGGC TTGC GCCGGCCCG-CAACGCGTCGA TCGGCACCAGCATCC TERM 959 1136054 - 1136000 - G 75 -14.1 -3.31263 | gap 1, opp_overlap 1136044 AGCCGATGGTGACAA GCGCGGCCCCGCCGCAGACATCCGCC GGAC AGCGGCCGGCCGCG-CGGGACCAAGC CCGTTCTTATCACAG RPD_1004 1138167 - 1136218 - | AsmA TERM 960 1136783 - 1136827 + g 74 -7.8 -4.25104 | gap 2, opp_overlap 1136791 TTGCCCTGCTCGATC CGG-AACGAGG-CGCCGAGCTG GGT CAGGTCGGTGACCTCGGCGCCG TTTTCCTGCCAGCCG TERM 961 1137190 - 1137141 - G 86 -17.9 -2.87132 | gap 1, overlap 1137157 CCTCGCCGCCATAGA CGCCAATCTGCGCAAACTGCGCGG TGA CCGCGCCGCTCACG-AGCTTGGCG TCGATCGACGCGGGA TERM 962 1137175 - 1137157 - G 72 -11.6 -3.55622 | overlap 1137141 GCCAATCTGCGCAAA CTGCGCGG TGA CCGCGCCG CTCACGAGCTTGGCG TERM 963 1137714 - 1137761 + g 72 -14.2 -3.04144 | gap 1, overlap 1137680 1137714 CCGCATTCGCCATCA CGA-CGACGCCGTCCTTGATCGT GAT GCGATCGATCGCGGCGTCGATCG TCTTGCCGCTGCCGG RPD_1005 1138441 - 1139121 + | cyclic nucleotide-binding TERM 964 1139483 - 1139467 - T 78 -5 -4.72986 | GACGGCGACCAAAAA CCGGAG TCGGG CGCCGG GGAGAGCACGACATA RPD_1006 1143010 - 1139834 - | acriflavin resistance protein RPD_1007 1143963 - 1143010 - | secretion protein HlyD TERM 965 1144137 - 1144115 - R 100 -14.1 -4.55826 | overlap 1144107 GGCAAAAGAGCAAAA GCGCCCCGC GAATG GCGGAGCGC CGAAATGCTGATACG RPD_1008 1144818 - 1144180 - | OmpA/MotB RPD_1009 1146542 - 1144956 - | peptidase C14, caspase catalytic subunit p20 TERM 966 1145369 - 1145406 + g 76 -8.3 -4.2828 | gap 1 CCTTGCTGGCGTAGA CCTGACCG-CGCCGGTAC AGC GCATTGGCGTCGGCCGGG TTTTCCTCGATGCGA TERM 967 1145598 - 1145628 + g 72 -13.2 -3.15544 | CAGTTCAGCGGGCTT GTCAGGTTCGGCGG CGG CCGCCGGAGCAGAC TTGGTGACGGTGGCG RPD_1010 1146560 - 1147246 + | hypothetical protein TERM 968 1147293 - 1147311 + T 73 -13.1 -3.15212 | opp_overlap 1147283 ACACACGCCGCGATC GGCCGCC ACAAC GGCGGCC TTGAGTATCATCATT RPD_1011 1149518 - 1147362 - | peptidase C14, caspase catalytic subunit p20 RPD_1012 1150353 - 1149700 - | OmpA/MotB TERM 969 1150065 - 1150082 + g 77 -12.7 -3.73775 | CGATCGCGGGCCGTT TGGCGGC GATT GCCGCCA TTTGCTCCCGATCGC RPD_1013 1150835 - 1152772 + | Outer membrane autotransporter barrel TERM 970 1152800 - 1152834 + T 100 -17.3 -4.08064 | gap 1, opp_overlap 1152806 GAACGCTTGATCTGT CGA-ATAGGCCCCGGC TCGC GCCGGGGCTTATGTCG TTTTGACGCCGAGTT TERM 971 1152827 - 1152806 - T 71 -12.9 -3.02511 | opp_overlap 1152800 TTGATCTGTCGAATA GGCCCCGGC TCGC GCCGGGGCT TATGTCGTTTTGACG RPD_1014 1153514 - 1153002 - | regulatory protein, MarR TERM 972 1155019 - 1155005 - g 72 -11.4 -3.54543 | opp_overlap 1155005 ACCGACGCGTTCAAA GCCGCA GGC TGCGGC TTCGTACTGCTGGAA RPD_1015 1153643 - 1155265 + | hypothetical protein RPD_1016 1155262 - 1155477 + | hypothetical protein TERM 973 1155809 - 1155782 - g 70 -9.8 -3.63515 | GGCGATGGCCAACAA GGTGATCGAGCG GGTC CGCTCCGTCACC GACAAGCCGATCAAA RPD_1017 1155606 - 1156556 + | beta-lactamase-like RPD_1018 1156630 - 1157976 + | homogentisate 1,2-dioxygenase RPD_1019 1157973 - 1158629 + | maleylacetoacetate isomerase RPD_1020 1158692 - 1159960 + | fumarylacetoacetase TERM 974 1159979 - 1160012 + T 87 -17.5 -2.94099 | gap 1, opp_overlap 1159967 1159997 GAGTTCCGCGGGTCA TTCCGGG-GCGCGAGC GAA GCTCGCGAACCCGGAA TCTCTCGTCGCGACA RPD_1021 1161218 - 1160103 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 975 1161387 - 1161355 - R 93 -20.7 -2.87132 | opp_overlap 1161361, overlap 1161361 TCCGCGCCGCAGACA GCAAAACGGCGCGCA GAA TGCGCGCCGTTTTCC GTGAGGTGGAATGAA TERM 976 1161361 - 1161381 + r 100 -18.3 -4.1899 | opp_overlap 1161361 1161355 CCGCAGACAGCAAAA CGGCGCGCA GAA TGCGCGCCG TTTTCCGTGAGGTGG TERM 977 1161381 - 1161361 - R 100 -18.3 -4.39166 | opp_overlap 1161361, overlap 1161355 CCGCAGACAGCAAAA CGGCGCGCA GAA TGCGCGCCG TTTTCCGTGAGGTGG RPD_1022 1162206 - 1161406 - | carbon-monoxide dehydrogenase RPD_1023 1164566 - 1162221 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 978 1163709 - 1163741 + g 85 -5.6 -5.00616 | gap 2, opp_overlap 1163700, overlap 1163704 1163706 1163705 1163709 1163710 GAGGAACGCCTCGGA G-CGGTCGC-CGGT CCATTTC ACCGCGCGGCCGAC TTTTTTGGAGGCCCA TERM 979 1164685 - 1164654 - R 79 -8.5 -4.2679 | opp_overlap 1164658 1164674 GAACGGTGACGAAAA GCGCGGGCGGCGG CCTATT CGGCGGCCTGCGC CACCTTCATGCGGGA RPD_1024 1165165 - 1164668 - | (2Fe-2S)-binding TERM 980 1165217 - 1165235 + H 82 -6 -4.83615 | TTAGAAGCACGGCCG TCGCAGTT TGC AACTGGGA TTTTTGTGACGCCTG RPD_1025 1165417 - 1167462 + | methyl-accepting chemotaxis sensory transducer RPD_1026 1167625 - 1169109 + | major facilitator transporter RPD_1027 1169106 - 1169915 + | HAD family hydrolase TERM 981 1170715 - 1170734 + G 84 -9.3 -4.56597 | overlap 1170717 ATGCGAAGTGTTTCC GATCGGC ATCGAC GCCGATC TTTTTGCGCAACAGG RPD_1028 1170038 - 1171522 + | Alpha,alpha-trehalose-phosphate synthase TERM 982 1171783 - 1171771 - f 76 -6.2 -4.57073 | overlap 1171773 GATCCCTTGCAAAAA CCGC CCGGC GCGG TCATGAGAGGGTGCC TERM 983 1172215 - 1172186 - f 78 -14.3 -3.06302 | opp_overlap 1172185 ACCATTGGTAGTGAA TCCCCCCGTTACG TCTC CGCAACGGGGGTA ATCCTTCGCAACGAA TERM 984 1172856 - 1172841 - g 95 -5.4 -5.27779 | gap 1, opp_overlap 1172847 1172851, overlap 1172842 1172854 TCCAAGATGAAAAAA GCGATGG AGA CCA-CGC GCGAAGGTCTCGCGA TERM 985 1173495 - 1173480 - g 70 -2.6 -4.59853 | gap 1, overlap 1173482 CGAATGCCTGAAAAA CT-CGAT CGC ATCGCAG AGATACTGTCATTCC RPD_1029 1172349 - 1175543 + | CRISPR-associated Cas5e family protein RPD_1030 1175519 - 1176418 + | CRISPR-associated Cas1 family protein TERM 986 1176635 - 1176618 - f 81 -6.3 -4.7254 | gap 1, opp_overlap 1176616 1176618 ACGGGTGACGAAAAA CTTGCCGC CGC GCGG-AAG TGTTCGTACCCTTCA TERM 987 1176785 - 1176730 - f 81 -13.4 -3.67134 | opp_overlap 1176730, overlap 1176731 AAAGCACCTCAACAA TTGGTTCTGCTCTGATTTCCGCCT GTCGAATT ACGCGGAAATCAGAGCAGTTCCAG TCGCTTGTGTCACTC TERM 988 1176730 - 1176785 + F 80 -16.3 -2.63555 | opp_overlap 1176730 1176731 AAAGCACCTCAACAA TTGGTTCTGCTCTGATTTCCGCCTG TCGAAT TACGCGGAAATCAGAGCAGTTCCAG TCGCTTGTGTCACTC TERM 989 1176784 - 1176731 - f 84 -16.9 -2.79557 | opp_overlap 1176730, overlap 1176730 AAGCACCTCAACAAT TGGTTCTGCTCTGATTTCCGCCT GTCGAATT ACGCGGAAATCAGAGCAGTTCCA GTCGCTTGTGTCACT TERM 990 1179988 - 1180008 + F 71 -12.5 -3.04322 | opp_overlap 1179988 CCTACCACGGGGAAA TCGGCAGGG ATG CCCGGCCGA TGTTCAGGCGTTAGC TERM 991 1180008 - 1179988 - f 77 -12.5 -3.58343 | opp_overlap 1179988 CCTACCACGGGGAAA TCGGCAGGG ATG CCCGGCCGA TGTTCAGGCGTTAGC TERM 992 1180868 - 1180890 + G 77 -7.6 -4.41353 | GGCGCGGCAGCTCGT CGAGCGCGAC GAT GTCGGGATCG TTTTCATCTATCTCG TERM 993 1181454 - 1181434 - g 80 -16.9 -2.62184 | opp_overlap 1181427 1181449 CGTTCGGCGACATCA TCGGCGCGA AGG TCGCGCCGA TCGCCGACTATTGCG RPD_1031 1180230 - 1182329 + | CoA-binding RPD_1032 1182373 - 1183398 + | extracellular solute-binding protein RPD_1033 1183478 - 1185130 + | binding-protein-dependent transport systems inner membrane component RPD_1034 1185127 - 1186206 + | spermidine/putrescine ABC transporter ATP-binding subunit TERM 994 1187607 - 1187591 - g 74 -2.1 -4.77036 | opp_overlap 1187606 CCCGATCACCAAAAA CGCCGAG AGC CTGGTCG CCGAAGCCGTTTGGG RPD_1035 1186203 - 1187873 + | FAD dependent oxidoreductase TERM 995 1188964 - 1188925 - g 73 -10.7 -3.65046 | gap 1 GTCGCATCGTAACAA CGTCAGCACGATGGGCGA ACTGA TCGCCGATCGCGC-GCCG GATACGATGGAAGTC RPD_1036 1187873 - 1189414 + | FAD linked oxidase-like TERM 996 1189620 - 1189586 - g 78 -13.7 -3.53012 | opp_overlap 1189608, overlap 1189603 1189605 CGGTGCTGGCGGAAA CCCGA-CGGCTCGCCAA AGA CTGGC-AGCCGCTCGGG ATCGCGATCGCCAAC TERM 997 1190330 - 1190380 + G 73 -6 -4.35518 | gap 1, opp_overlap 1190364 GCGTGTTGCCGAATC CCGCCGCGATCGACGATCTTGTC GACCCA GGCAAGCGCGCCGAGCG-GGTGG TTTTCGTGTCGGCTT RPD_1037 1189411 - 1190853 + | carbohydrate kinase, FGGY RPD_1038 1191002 - 1191637 + | regulatory protein, TetR RPD_1039 1192561 - 1191683 - | short-chain dehydrogenase/reductase SDR RPD_1040 1192949 - 1193650 + | hypothetical protein RPD_1041 1194172 - 1193675 - | regulatory protein, MarR TERM 998 1193786 - 1193800 + g 72 -11.4 -3.57561 | CGCTAGCGCGTTGAG GCGCTG GGT CAGCGC TTTGCCGCGTTCCGA RPD_1042 1194277 - 1195464 + | putative nitrile hydratase regulator RPD_1043 1195621 - 1197135 + | amidase RPD_1044 1197179 - 1198036 + | inner-membrane translocator RPD_1045 1198041 - 1199264 + | twin-arginine translocation pathway signal RPD_1046 1199326 - 1200384 + | inner-membrane translocator RPD_1047 1200371 - 1201105 + | ABC transporter related RPD_1048 1201098 - 1201799 + | ABC transporter related RPD_1049 1201968 - 1203212 + | iron-containing alcohol dehydrogenase TERM 999 1203842 - 1203871 + G 70 -8.5 -4.0162 | gap 1, opp_overlap 1203820, overlap 1203842 GTGGCGCCGTTCACC G-CGCCGGGGAGCT GCC AGCTCGCCGCCGGC TTTGTCGTCTACGGA RPD_1050 1203422 - 1204459 + | fructose-1,6-bisphosphatase RPD_1051 1204488 - 1205363 + | phosphoribulokinase TERM 1000 1206147 - 1206119 - g 70 -6.5 -4.2717 | AGCAGGCCAGGAAAA GCGACCGGCCGTC CCT GATCGCCTGCCGC ACCAAGATCGGCTTC RPD_1052 1205398 - 1207413 + | transketolase TERM 1001 1208374 - 1208359 - g 73 -6.1 -4.33417 | GCGACCCAGAACAAA GCGGA GTTCGA TCCGC GCAAGTTCCTGAAGC RPD_1053 1207471 - 1208556 + | fructose-1,6-bisphosphate aldolase TERM 1002 1208591 - 1208570 - f 72 -13.7 -2.7556 | gap 1, overlap 1208567 AATTTGACGGAATCA GC-GGCGGCC GCC GGCCGCCTGC ACTCGCCATTCAGGA TERM 1003 1208669 - 1208657 - g 79 -7.7 -4.46233 | opp_overlap 1208663 TCAACCTCAAAGAAA GCGAT CTG ATCGC CGGCGGGCGGCATGT TERM 1004 1208758 - 1208738 - g 83 -15.4 -3.54459 | GTAATTTCGTGGAAA CGGCGGCG CATTT CGCCGCCG AGTCCTCCACCGGAA RPD_1054 1208614 - 1209999 + | ribulose bisphosphate carboxylase TERM 1005 1210023 - 1210051 + F 100 -13.8 -4.93365 | overlap 1210024 1210027 GATCACTTCTGATTG CGAGCGGCCCGC CTTGC GCGGGCCGTTCC TTTTTGGTTGTCGGG TERM 1006 1210024 - 1210050 + F 100 -17.3 -3.55296 | overlap 1210023 1210027 ATCACTTCTGATTGC GAGCGGCCCGC CTTGC GCGGGCCGTTC CTTTTTGGTTGTCGG TERM 1007 1210027 - 1210047 + F 91 -15.4 -3.89085 | overlap 1210024 1210023 ACTTCTGATTGCGAG CGGCCCGC CTTGC GCGGGCCG TTCCTTTTTGGTTGT RPD_1055 1210250 - 1210546 + | hypothetical protein RPD_1056 1210803 - 1210576 - | hypothetical protein TERM 1008 1210791 - 1210765 - G 79 -16.6 -3.07816 | opp_overlap 1210751 CCTTGATTGAGTGAA CGCTCCGCCG CATTGCC CGGCGGAGCG CGTTGCGAGCAAGTT RPD_1057 1211163 - 1211444 + | hypothetical protein TERM 1009 1212439 - 1212462 + G 70 -5.9 -4.18934 | gap 1 GACCGCATCATGGGC GGCGCCGGCC TGCAT GGGCG-CGCC TTTATTCCGCTGCTG RPD_1058 1211455 - 1213335 + | ferrous iron transport protein B RPD_1059 1214199 - 1213345 - | hypothetical protein RPD_1060 1214455 - 1215393 + | short-chain dehydrogenase/reductase SDR TERM 1010 1216005 - 1215986 - g 72 -5 -4.56775 | gap 1, opp_overlap 1215997, overlap 1215987 AGGCTGCCGCAAAAA GCGATCGAC CAG ATCG-TCGC GACCTCGGTTCCGCT TERM 1011 1217169 - 1217135 - g 70 -11.3 -3.53811 | gap 1 GCGATCCTTTGGAAA GGCCAC-GCCGAGCCG CCGC CGGAGCGGCCGCGGCC ACAAATCCCGCTGCA RPD_1061 1215686 - 1217434 + | transcriptional regulator NifA RPD_1062 1217618 - 1217812 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 1012 1217877 - 1217934 + F 93 -19.1 -3.14132 | gap 1, opp_overlap 1217875 1217878 GACATCGAGAACAGG ATGACGACGGCA-CTGCGGCCGCTGCCG TCA CGGCAGCGGCGGCATCTGCCCTCGCCAA TTGATCGCCGCGCCA TERM 1013 1217933 - 1217878 - f 100 -24.8 -2.81313 | gap 1, opp_overlap 1217877, overlap 1217875 ACATCGAGAACAGGA TGACGACGGCA-CTGCGGCCGCTGCCG TCA CGGCAGCGGCGGCATCTGCCCTCGCCA ATTGATCGCCGCGCC RPD_1063 1218030 - 1219589 + | nitrogenase cofactor biosynthesis protein NifB RPD_1064 1219613 - 1219834 + | 4Fe-4S ferredoxin, iron-sulfur binding RPD_1065 1219844 - 1220200 + | HesB/YadR/YfhF RPD_1066 1220202 - 1220741 + | hypothetical protein RPD_1067 1220731 - 1221537 + | LRV FeS4 cluster RPD_1068 1221534 - 1221833 + | NifZ RPD_1069 1221833 - 1222090 + | hypothetical protein RPD_1070 1222103 - 1222312 + | NifT/FixU RPD_1071 1222315 - 1222602 + | hypothetical protein RPD_1072 1222614 - 1223516 + | hypothetical protein TERM 1014 1224926 - 1224910 - g 70 -11.5 -3.44146 | opp_overlap 1224919 CTCGCCGAGAAGGAA GCCGCCA AGG CGGCGGC CGCCACCGCTTGATC nifH 1224040 - 1224939 + | nitrogenase reductase RPD_1074 1225007 - 1226470 + | nitrogenase molybdenum-iron protein alpha chain TERM 1015 1226592 - 1226582 - g 72 -5.4 -4.41548 | opp_overlap 1226575 1226582 1226587 1226589 CGAGACCGTAGAAAA GATC CGG GATC ATTTCGATCTCTTCC TERM 1016 1226682 - 1226660 - g 75 -9 -4.12902 | CAAGCAGTTCGAAAA CGCCGTCGGC GAA GCCGAAGTCG AGCGCGTGGCGGACT TERM 1017 1226849 - 1226813 - g 83 -12.1 -4.13767 | opp_overlap 1226811 1226832 GGTCGGATTCGAAAA GACGCTGCCGTTCGTGC ACG GCTCGCAGGGCTGCGTC GCCTATTATCGTAGC RPD_1075 1226508 - 1228121 + | nitrogenase molybdenum-iron protein beta chain TERM 1018 1228296 - 1228251 - g 81 -11.7 -3.89614 | gap 1, opp_overlap 1228291, overlap 1228262 GCCAAGTCCGAGAAA CAGCGCAAGAAGGGCTGCAGCA AAC CGCTGCAGCCCGGCG-GCGCGG CCGGTGGCTGCGCTT TERM 1019 1228286 - 1228262 - g 93 -17.9 -3.69373 | overlap 1228251 GAAACAGCGCAAGAA GGGCTGCAGCA AAC CGCTGCAGCCC GGCGGCGCGGCCGGT TERM 1020 1228291 - 1228309 + G 78 -13.8 -3.53012 | opp_overlap 1228251 CGCTGCAGCCCGGCG GCGCGGCC GGT GGCTGCGC TTTCGACGGCGCCAA RPD_1076 1228173 - 1229639 + | nitrogenase MoFe cofactor biosynthesis protein NifE RPD_1077 1229641 - 1231017 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN RPD_1078 1231064 - 1231462 + | dinitrogenase iron-molybdenum cofactor biosynthesis RPD_1079 1231464 - 1231931 + | hypothetical protein RPD_1080 1231943 - 1232149 + | hypothetical protein TERM 1021 1232168 - 1232153 - f 72 -11.8 -3.29043 | overlap 1232140 AAGGCTGCGTGACAA GGCCGC CTGA GCGGCC GCAGCGCCAGTCCGA RPD_1081 1232219 - 1232533 + | 4Fe-4S ferredoxin, iron-sulfur binding RPD_1082 1232570 - 1233277 + | NifQ TERM 1022 1233392 - 1233372 - f 72 -14 -2.73875 | overlap 1233369 1233352 CGGTCGCGAAGATCA CCCTCCCC TGGAG GGGGAGGG TCGCGAGCGTAGCGA RPD_1083 1233688 - 1234008 + | HesB/YadR/YfhF RPD_1084 1234037 - 1235032 + | nitrogen-fixing NifU-like TERM 1023 1236104 - 1236083 - g 70 -6.5 -4.26076 | gap 1, opp_overlap 1236095, overlap 1236084 1236095 TGATGGCCATGAAAA TCGCGGA-GG ACA CCGTCCGCGG CGGCGTGCGGTTCTC RPD_1085 1235029 - 1236252 + | aminotransferase, class V RPD_1086 1236245 - 1237429 + | Alpha-isopropylmalate/homocitrate synthase TERM 1024 1237790 - 1237804 + G 70 -4.2 -4.55287 | opp_overlap 1237772 1237789, overlap 1237774 1237788 GGTCGCGCCGAAATC GCCG CGTCGGC CGGC TTTTGTCTCGCTCGA nifW 1237476 - 1237832 + | nitrogenase stabilizing/protective protein TERM 1025 1237864 - 1237899 + F 100 -21.2 -3.89346 | CGCATCGATCGTTTC GCAACCTCGGCCCGCC ACGC GGTCGGCCGAGGTTGC TTTCTGGCATGCGCG RPD_1088 1238139 - 1238984 + | electron transfer flavoprotein beta-subunit RPD_1089 1239009 - 1240115 + | electron transfer flavoprotein beta-subunit RPD_1090 1240127 - 1241434 + | electron-transferring-flavoprotein dehydrogenase RPD_1091 1241475 - 1241771 + | ferredoxin like protein, fixX RPD_1092 1242436 - 1241852 - | hypothetical protein TERM 1026 1242640 - 1242617 - R 77 -15.3 -2.64616 | TGTCGAGCGAGACGA GGCGGGCTG TTTGTT CAGCCCGCC ATTGAAGGCCGGAGC RPD_1093 1243121 - 1242666 - | protein of unknown function DUF861, cupin_3 RPD_1094 1243475 - 1243203 - | hypothetical protein RPD_1095 1243833 - 1245059 + | acyl-CoA dehydrogenase-like RPD_1096 1245095 - 1246033 + | hypothetical protein RPD_1097 1246841 - 1246110 - | short-chain dehydrogenase/reductase SDR RPD_1098 1248216 - 1246834 - | AMP-dependent synthetase and ligase RPD_1099 1248418 - 1248203 - | putative acyl carrier protein RPD_1100 1248553 - 1249428 + | hypothetical protein TERM 1027 1249881 - 1249911 + G 78 -14.6 -3.28712 | CGAGATCGATGATCC CGAGCGCGTCACCG AGC TGGTGTCGCGCGCG TTCTACACGGCGACC RPD_1101 1249468 - 1251147 + | acetolactate synthase 2 catalytic subunit TERM 1028 1251314 - 1251337 + T 78 -12.4 -3.74872 | gap 1, overlap 1251315 1251318 1251321 GCCACAGTTTCGCGA TCCCGCGGCGC GGA GCGCC-CGGGG TTTGCTGCGGTCGCT TERM 1029 1251315 - 1251336 + T 74 -13.7 -2.84602 | gap 1, overlap 1251314 1251318 1251321 CCACAGTTTCGCGAT CCCGCGGCGC GGA GCGCC-CGGG GTTTGCTGCGGTCGC RPD_1102 1252747 - 1251875 - | aminotransferase RPD_1103 1254717 - 1252825 - | acyl-CoA synthetase TERM 1030 1255018 - 1255039 + G 72 -7.1 -4.23213 | overlap 1255019 CCTCCTATGCATTCG ACAGCGCCG ATCA CGGCGCCGC TTTGTTCAATCTCGA RPD_1104 1254918 - 1256222 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 1031 1256765 - 1256742 - g 70 -3.7 -4.56597 | opp_overlap 1256729, overlap 1256744 CGGCTGCCGCAAAAA TGCTCCGGC GTCTTT GCCGGCGAA CAGGTGAATGACGAT RPD_1105 1256238 - 1257239 + | homoserine O-succinyltransferase RPD_1106 1257236 - 1257757 + | flavin reductase-like, FMN-binding RPD_1107 1259199 - 1257847 - | putative membrane protein involved in export of O-antigen TERM 1032 1258899 - 1258925 + g 76 -6.5 -4.46212 | overlap 1258900 CGGCGCAGGCGAGCG CGCTGAAGGTC ATCGC GCCCTTCAGCA TTTTCTCATCGCCCG RPD_1108 1259464 - 1259823 + | hypothetical protein RPD_1109 1261360 - 1259840 - | hypothetical protein TERM 1033 1260133 - 1260103 - G 83 -15.4 -3.53444 | opp_overlap 1260092, overlap 1260126 1260127 GTACCGGCCGCCAAA GCCGGCCGTTACGT TGA ACGAAATGGCCGGC GGGCCGCGCGCTCGC TERM 1034 1260847 - 1260814 - G 78 -15.9 -3.14931 | opp_overlap 1260803 CGCAGGCGGGACGAA CCGAGGCGGCAGCCG TCGC CGGCCGCGGCCCCGA ATCCAGCACGCCTTT RPD_1110 1262609 - 1261350 - | glycosyl transferase, group 1 TERM 1035 1262556 - 1262590 + g 95 -7.1 -5.42259 | gap 1 GGTCTGCGCAGACGT GCCGGATTCGAGAGCG AGAA CCCGCTCGAA-CTGGC TTTTTTTCAGGATCG RPD_1111 1262993 - 1265059 + | lipopolysaccharide biosynthesis RPD_1112 1265056 - 1266393 + | hypothetical protein TERM 1036 1267268 - 1267221 - g 70 -11.9 -3.47349 | GCCGGAAACCTACAA GCCGCCGCCG-GCGTCATCGGGC ATGG ACCCG-CGCCACGCGGCGCCGGC GGGAAATCTCACCGC RPD_1113 1266403 - 1267725 + | glycoside hydrolase family protein RPD_1114 1268749 - 1267829 - | WecB/TagA/CpsF family glycosyl transferase RPD_1115 1269975 - 1268995 - | UDP-glucose 4-epimerase RPD_1116 1271262 - 1270021 - | hypothetical protein TERM 1037 1270525 - 1270483 - G 89 -17.6 -3.2794 | GTCGATCGACAGCAA CACGGCGATCGCCGCGACCA GCA TCGCCGCGGCGAGCGCAGCG AGCACCACGATCCGC TERM 1038 1271924 - 1271898 - g 90 -18 -3.53012 | TCCGGTGCGGCCAAA GCCGGCGATCGC GTG GTGATCGCCGGC GCCGGCGGACGAACG RPD_1117 1271529 - 1272494 + | PDZ/DHR/GLGF RPD_1118 1273624 - 1272545 - | basic membrane lipoprotein TERM 1039 1273398 - 1273419 + g 72 -11.5 -3.53444 | overlap 1273407 TCGATCGAGCGCTCG GCGTCGGGG CCTT CGCCGACGC TTTCGAGGAAGGTGG RPD_1119 1274619 - 1273702 - | inner-membrane translocator RPD_1120 1275697 - 1274606 - | inner-membrane translocator RPD_1121 1277300 - 1275681 - | ABC transporter related TERM 1040 1276154 - 1276114 - G 83 -13.2 -3.76224 | gap 1, opp_overlap 1276114 1276138, overlap 1276087 GCCCGATCGACGAAA CCGCGC-CGCACCACGCCG GGGT CGGCGTGGCTCGTGAGCAG CGCGTTTTCGGACAG TERM 1041 1276239 - 1276219 - G 80 -13.9 -3.72576 | TGCTCCGGGATGAAA GCGGCGCCG AAC CGGCGTCGC GCCGTGATCGACAGA TERM 1042 1277132 - 1277181 + g 72 -12.9 -3.14132 | gap 1 CATGGATCTGGCCCG GCGCGATCGCGATATCGATCGCCG AAT TGGCGGT-GAAATCGCCATAGCGC TTGGTCAGGCCGAGG RPD_1122 1277407 - 1277691 + | hypothetical protein TERM 1043 1278255 - 1278267 + G 73 -9.1 -3.9461 | overlap 1278247 CCCAGGCGCGCGGCA GCGAC GCG GTCGC TTATTGTTCGCAGCG RPD_1123 1277927 - 1278352 + | BA14K-like TERM 1044 1278400 - 1278377 - T 100 -21 -3.93038 | opp_overlap 1278377 GATCTGAACACGAAA GCCGCGCGGG ATGT CCCGCGCGGC TTTTTTTCATGATCA TERM 1045 1278377 - 1278400 + T 100 -21 -5.55664 | opp_overlap 1278377 GATCTGAACACGAAA GCCGCGCGGG ATGT CCCGCGCGGC TTTTTTTCATGATCA RPD_1124 1279868 - 1278477 - | hypothetical protein RPD_1125 1280398 - 1281267 + | hypothetical protein TERM 1046 1282101 - 1282058 - g 72 -13.1 -3.10796 | gap 1 CGTCAGCATCGAAGA CGTCGGCAACGTCG-CGACC TTCCT GGTCGGCGACGGCGCCAGCG CGCTGACCGGCAATA RPD_1126 1281378 - 1282154 + | enoyl-(acyl carrier protein) reductase TERM 1047 1282904 - 1282875 - g 79 -16.3 -2.80816 | TCGCGACCGAGCACA GCGACGCCGCGGC TGCA GCCGCGGTGGCGC TGGCGCGCGCCGGCA RPD_1127 1282175 - 1283593 + | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase RPD_1128 1283590 - 1284795 + | acetate kinase RPD_1129 1285833 - 1284874 - | phenylacetic acid degradation-related protein RPD_1130 1285923 - 1286240 + | hypothetical protein TERM 1048 1286862 - 1286838 - g 73 -10.6 -3.73068 | opp_overlap 1286841 CCGGCAATGGAACAA GACCGCGCCG CTGCT CGGCGCCGCC TGCCGCGACGACCGG RPD_1131 1286377 - 1287117 + | nuclease (SNase-like) RPD_1132 1287926 - 1287132 - | enoyl-CoA hydratase/isomerase TERM 1049 1288957 - 1288978 + G 70 -6.5 -4.19817 | overlap 1288958 CGATGCCGGAGGCCG TGCTGCAGG AATG TCTGCGGCG TTTTCCGTCGATCAA RPD_1133 1288095 - 1289651 + | AMP-dependent synthetase and ligase RPD_1134 1290608 - 1289667 - | regulatory proteins, IclR TERM 1050 1289988 - 1289962 - G 74 -5.1 -4.44667 | gap 2, overlap 1289963 TCCGTGAACAACAAA CGCCGC--TCGTC GTC GCCGATCGCGGCG AGATAGGCCTTGCCC TERM 1051 1290461 - 1290414 - G 86 -16.9 -3.2614 | gap 1, opp_overlap 1290428 1290429, overlap 1290417 CAGCGCCGACACGAA CAACCGGCCGCCGGCGTCGTCG CTGTC CGCCG-CGCCGGCGCGCGGTCG CCGCGAGGCGCGTTG TERM 1052 1290458 - 1290417 - G 87 -15 -3.7732 | gap 1, opp_overlap 1290428 1290429, overlap 1290414 CGCCGACACGAACAA CCGGCCGCCGGCGTCGTCG CTGTC CGCCG-CGCCGGCGCGCGG TCGCCGCGAGGCGCG TERM 1053 1290564 - 1290593 + g 80 -9.2 -4.1711 | overlap 1290576 CGTCTTGGCCGCCGG CCGACGCGTAGT CGCGGA ACGCCGCGTCGG TTTCTTGGCCGTCAT RPD_1135 1290742 - 1291614 + | MaoC-like dehydratase RPD_1136 1291840 - 1293084 + | twin-arginine translocation pathway signal RPD_1137 1293092 - 1293811 + | ABC transporter related RPD_1138 1293804 - 1294508 + | ABC transporter related TERM 1054 1294628 - 1294640 + G 71 -9.1 -3.84825 | GCGGCATCGTCAATT TCGCC CAT GGCGA TTTCATCTCGCTGGC RPD_1139 1294519 - 1295382 + | inner-membrane translocator TERM 1055 1296304 - 1296359 + G 72 -13.8 -3.05294 | gap 1, opp_overlap 1296333 1296334, overlap 1296356 TGATTCTCGTCACGC CGC-GCGGGCTGTTGCCGCTGTTCGAG AAA CTGGTGCGGCGGCGCCGGCCGGCCGCG TCTTAAAGCGTTTCC RPD_1140 1295379 - 1296365 + | inner-membrane translocator TERM 1056 1296362 - 1296405 + T 73 -6.3 -4.38927 | gap 3, opp_overlap 1296367 1296388, overlap 1296356 1296367 1296370 CCGGCCGGCCGCGTC TTAAAGCGTTTCCGGTTCTGAT CGA ATCAGAACCGG---CGCTCTAA TTTCTTGTCTGACAC TERM 1057 1296493 - 1296472 - T 88 -17.3 -2.97017 | opp_overlap 1296472, overlap 1296467 1296459 AACGCGATAACGACA TCGGCGCGG TTGC CCGCGCCGA TTATTCGTCCGATCA TERM 1058 1296472 - 1296493 + T 100 -17.3 -3.7282 | opp_overlap 1296472 1296467 1296459 AACGCGATAACGACA TCGGCGCGG TTGC CCGCGCCGA TTATTCGTCCGATCA RPD_1141 1297588 - 1296521 - | glycosyl transferase, group 1 RPD_1142 1297841 - 1299598 + | ABC transporter related TERM 1059 1301301 - 1301352 + G 73 -6.5 -4.31433 | gap 2, overlap 1301301 1301302 1301314 TGCTGTTCACGGGAA T-CGTCCGGA-CCGATCGGGCGCGG CTGG TCGCGACCGATCTGATGCGGCCGCA TTTCTTCTCAGGCTG RPD_1143 1299680 - 1301878 + | Amylo-alpha-1,6-glucosidase RPD_1144 1301927 - 1302400 + | PRC-barrel TERM 1060 1302740 - 1302779 + G 79 -13.6 -3.62572 | CGTTGCTGTCGCGGC GATCGGCGTCGCGGCG CTGGCCTA TGCGGCGATGCCGATC TTTCCGGTGGTGATG TERM 1061 1303062 - 1303103 + G 95 -18.5 -3.53091 | opp_overlap 1303058 1303055 1303054 CAAGAAATCGACTCC GCCCGGGCGCACGGCGCGG AGCG CCGCGACGAGCCGCCGGGC TTTCGCGCCGCCGGT RPD_1145 1302558 - 1303718 + | major facilitator transporter TERM 1062 1303750 - 1303786 + F 73 -12.5 -3.17075 | opp_overlap 1303750 1303754 1303761, overlap 1303754 GAGCGCAGCGACGAA GCAATCCAGAAGC-CCG TTGCC CGGCGCT-CTGGATTGC TTCGCTTCCCCGGCA TERM 1063 1303786 - 1303750 - f 73 -12.5 -3.18582 | opp_overlap 1303750 1303754, overlap 1303754 1303761 GAGCGCAGCGACGAA GCAATCCAGAAGC-CCG TTGCC CGGCGCT-CTGGATTGC TTCGCTTCCCCGGCA RPD_1146 1303783 - 1304139 + | hypothetical protein RPD_1147 1305011 - 1304154 - | hypothetical protein RPD_1148 1305132 - 1306433 + | FAD dependent oxidoreductase RPD_1149 1308161 - 1306521 - | ABC transporter related TERM 1064 1306573 - 1306561 - G 75 -9.1 -4.08216 | TGACTCCGCGCAAAA TCCCC GCC GGGGA TCGAGGCGAGCAGCG TERM 1065 1307346 - 1307390 + g 73 -11.2 -3.74077 | gap 1, overlap 1307346 1307349 GGTCTCGGTCGAGAT C-GGCCGCGGCGGCGGCGCGG TCAG CGGCGGCACCGCCGCGATCAG TTTCCGTGTGTAGGG RPD_1150 1308988 - 1308158 - | binding-protein-dependent transport systems inner membrane component RPD_1151 1309970 - 1308993 - | binding-protein-dependent transport systems inner membrane component RPD_1152 1311611 - 1309995 - | extracellular solute-binding protein RPD_1153 1313667 - 1311739 - | Sulfate adenylyltransferase, large subunit TERM 1066 1312707 - 1312663 - G 70 -11.5 -3.35798 | gap 4, overlap 1312665 ATCGTGCAGCCAGAA GATCCGCGCGCGCAGCCGCCGCG TGT CGC-GCGGC-GC-CGCGCCGA-C ATGGCCGATCACGTC TERM 1067 1312706 - 1312665 - G 78 -15.2 -3.24924 | gap 3, overlap 1312663 CGTGCAGCCAGAAGA TCCGCGCGCGCAGCCGCCGCG TGT CGC-GCGGC-GC-CGCGCCGA CATGGCCGATCACGT TERM 1068 1313500 - 1313449 - G 79 -4.5 -4.72272 | gap 3 CGCGTCGAGCAAAAA CGAC-CACTCGAACGGCATTCCGCGC CGG GCGCTGACCGCC-TTC-AGCATGTCG AGCTTGCCCTCGGGC RPD_1154 1314619 - 1313744 - | sulfate adenylyltransferase subunit 2 TERM 1069 1314849 - 1314860 + H 88 -7.2 -4.93696 | opp_overlap 1314848 TCAATCCAGAGAAGC GCGG GCGG CCGC TTTTTCCTCTTTGGG RPD_1155 1314906 - 1315652 + | phosphoadenosine phosphosulfate reductase TERM 1070 1315823 - 1315843 + G 70 -8.2 -3.95584 | GACTTCTGGTTGCGA CGTCCGCG CACGC CGCCGACG TTTCGTTGCTCAACG TERM 1071 1316214 - 1316187 - g 72 -13.5 -3.17212 | GGACGATCTGATCAA GTCCGGCGTCA GTGTCG TGACGCCGAAC CCGAAGACCTCGGGC RPD_1156 1315777 - 1316766 + | thiosulphate-binding protein RPD_1157 1316823 - 1317662 + | Sulfate ABC transporter, permease protein CysT RPD_1158 1317667 - 1318584 + | Sulfate ABC transporter, permease protein CysW RPD_1159 1318574 - 1319620 + | sulphate transport system permease protein 1 TERM 1072 1320183 - 1320201 + G 75 -11.6 -3.64703 | opp_overlap 1320181 GGGCGTGGAAGCAGG CGGCGCGC TCG GCGCGGCG TTTCGATCCCGCGCC RPD_1160 1319752 - 1320753 + | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 1073 1320825 - 1320856 + G 81 -10.8 -4.03978 | CTCGACATCGACGGC GGCGTGGTGACCTC GGCG GAAGTCACAGCGCC TTTGTATCGCGGCTT RPD_1161 1320750 - 1322195 + | nickel-dependent hydrogenase, large subunit RPD_1162 1322432 - 1323565 + | hydrogenase (NiFe) small subunit (hydA) RPD_1163 1323584 - 1325377 + | nickel-dependent hydrogenase, large subunit RPD_1164 1325400 - 1326128 + | nickel-dependent hydrogenase b-type cytochrome subunit TERM 1074 1326755 - 1326729 - g 82 -11.6 -4.07885 | gap 1 GACGCCGCGCCAAAA CGGCTGGC-GC TGATCG GCTGCCAGCCG GAGGATCTCGAGGAT RPD_1165 1326363 - 1326974 + | hydrogenase expression/formation protein RPD_1166 1326987 - 1327571 + | HupE/UreJ protein RPD_1167 1327588 - 1327890 + | hydrogenase assembly chaperone hypC/hupF RPD_1168 1328118 - 1328522 + | hydrogenase-1 expression HyaE RPD_1169 1328519 - 1329385 + | HupH hydrogenase expression protein RPD_1170 1329382 - 1329594 + | rubredoxin-type Fe(Cys)4 protein TERM 1075 1330048 - 1330021 - g 77 -12.7 -3.6502 | gap 1 CACGGCGGACCCAAA GCCCGAGCCGGC CGCGC GCCAGC-CGGGC GCGACCGCCGTGGCG RPD_1171 1329584 - 1330114 + | putative hydrogenase expression/formation protein HupJ TERM 1076 1330453 - 1330488 + G 77 -16 -3.05384 | opp_overlap 1330472, overlap 1330424 CTGCCGGCATGGGCG CCGCTGCTCCGCGATG TAAT CGCCGCGGCGCGGCGG TTCGATCAGGCCGGA RPD_1172 1330111 - 1331223 + | coenzyme F420-reducing hydrogenase alpha subunit-like RPD_1173 1331216 - 1331557 + | hydrogenase nickel insertion protein HypA TERM 1077 1331911 - 1331859 - g 74 -12.6 -3.61715 | gap 1 TATCCTGTCCAAGAA CGACAGCTACGCC-GCCGCGAACCG CGCG CGCTTCGCGGCCAGCGGCGCCTTCG CGCTCAACTTCGTCT RPD_1174 1331557 - 1332495 + | hydrogenase accessory protein HypB TERM 1078 1332777 - 1332755 - g 70 -10.4 -3.7104 | overlap 1332756 ATCGAGACCGAACAA CTGCGCGCGC GCG GCGAGCGCGG CTTCGACATCGCCGA TERM 1079 1334317 - 1334333 + G 91 -11.5 -4.2528 | overlap 1334295 GCTGTTCGACGCCGC CGCCGGG TTG CTCGGCG TTTGTTCGGTTCAGG RPD_1175 1332500 - 1334791 + | (NiFe) hydrogenase maturation protein HypF RPD_1176 1334788 - 1335000 + | hydrogenase assembly chaperone hypC/hupF RPD_1177 1334997 - 1336139 + | hydrogenase expression/formation protein HypD TERM 1080 1336191 - 1336177 - g 81 -5.6 -4.8048 | overlap 1336178 GCTCGATATCAAAAA CGGTCG GGT CGACCT GTCGCACGGCGCCGG RPD_1178 1336136 - 1337182 + | hydrogenase expression/formation protein HypE TERM 1081 1338154 - 1338185 + G 72 -11.5 -3.50393 | opp_overlap 1338137, overlap 1338156 1338158 GCGACCTCGAGGCCG AAGTTCGCGCCGG CCGATT CCGGCGCGATCTG TTCTATCGGCTGGCG TERM 1082 1338156 - 1338183 + G 75 -14.1 -3.32698 | opp_overlap 1338137, overlap 1338154 1338158 GACCTCGAGGCCGAA GTTCGCGCCGG CCGATT CCGGCGCGATC TGTTCTATCGGCTGG TERM 1083 1338158 - 1338181 + G 80 -15.3 -3.22886 | opp_overlap 1338137, overlap 1338156 1338154 CCTCGAGGCCGAAGT TCGCGCCGG CCGATT CCGGCGCGA TCTGTTCTATCGGCT RPD_1179 1337223 - 1338671 + | sigma-54 factor, interaction region TERM 1084 1339607 - 1339562 - g 78 -10.4 -4.08216 | TGAGCTTCCCGAAAA GCGGTGAGATCCAGCGCG-TCG ATGT CGATCGCG-TGGTGCGCACCGC GGCGCGCTGGGCAGC RPD_1180 1338661 - 1340016 + | ATP-binding region, ATPase-like RPD_1181 1341063 - 1340161 - | alpha/beta hydrolase fold TERM 1085 1340300 - 1340270 - G 85 -17.7 -2.52464 | gap 1 GCCTGCTGGAAGTGA TCGGCGATGCCGGC GCTG GCCG-CATCGCCGA GGAAGCTCTCGCCGG RPD_1182 1341241 - 1341663 + | regulatory protein, ArsR RPD_1183 1342045 - 1341677 - | rhodanese-like protein RPD_1184 1343195 - 1342068 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1086 1342152 - 1342124 - G 70 -2.5 -4.67353 | gap 1, opp_overlap 1342125 1342126 1342148, overlap 1342125 1342126 TCAGCCAGTGAAAAA GCTTCATCTTCG GCCCGA CGAAGTTGAA-C TTTTCATTTCGGAAC TERM 1087 1343459 - 1343483 + G 77 -10 -3.90318 | overlap 1343460 1343463 CGCGGTCGAGGACTA TGTGTTCGGC ACCGC GCCGAACGCG TTTCTGGCGTCGTGC RPD_1185 1343406 - 1344020 + | methyltransferase type 11 RPD_1186 1344435 - 1344043 - | nitrogenase-associated protein RPD_1187 1345039 - 1344452 - | hypothetical protein RPD_1188 1345275 - 1346150 + | modD protein RPD_1189 1348005 - 1346359 - | AMP-dependent synthetase and ligase TERM 1088 1347770 - 1347748 - G 71 -9.1 -3.87869 | gap 1, overlap 1347750 GCAATTGCCGAGAAA CAGCGCGACG CGAT CGCCGCGC-G CGACGCCGAGCCCGG TERM 1089 1347769 - 1347750 - G 74 -12.8 -3.52678 | overlap 1347748 AATTGCCGAGAAACA GCGCGACG CGAT CGCCGCGC GCGACGCCGAGCCCG RPD_1190 1348248 - 1348454 + | hypothetical protein TERM 1090 1349032 - 1348985 - g 90 -19 -3.06183 | gap 1 TTCACCGCGACCGAA CGAGGCGCCGCCGCCGGTCATCG TCC CGTCG-CCGCCGGCGGCGCGCCG AACGGCGCCGATCGA RPD_1191 1348545 - 1349180 + | NUDIX hydrolase RPD_1192 1349547 - 1349269 - | hypothetical protein RPD_1193 1350739 - 1349756 - | hypothetical protein RPD_1194 1354427 - 1350963 - | chromosome segregation protein SMC TERM 1091 1351955 - 1352001 + g 74 -14.5 -3.03124 | gap 2, overlap 1351931 CGGCGAACACCGCGG GCGCATTGTCGAGCTCGGCGCGC TCG GCG-GTC-AGCTCGGCGAGGCGC TCTTCGACGGTCGCG TERM 1092 1352629 - 1352581 - G 75 -11.6 -3.74693 | gap 1, opp_overlap 1352615, overlap 1352618 GCCGAGGCGACGAAA CCGTCCCAGCGCCAGACGTCGCC GTCG AGCGACACCAGCCGCTGGC-CGG TCTTGAGCTGCCCGA TERM 1093 1353324 - 1353281 - G 77 -15.4 -3.02144 | opp_overlap 1353282 1353283 1353321 TGAGTTCGGCGAACA GC-CGCTCGGCCTCGCCGAG CGCTTC CTCGGCCAGGCCGA-CGCGC TCGTCGACGCCGCTG TERM 1094 1355021 - 1355011 - g 72 -8.2 -4.14392 | overlap 1355012 TGCGAACGGCGAAAA CGCG GAT CGCG GGCGATCTCGCCAAG RPD_1195 1354860 - 1355066 + | plasmid maintenance system antidote protein-like RPD_1196 1355792 - 1355424 - | small multidrug resistance protein RPD_1197 1356511 - 1355843 - | twin-arginine translocation pathway signal TERM 1095 1356525 - 1356580 + r 76 -13.3 -3.52652 | gap 2, overlap 1356528 1356576 ATCAGCGAGGTGCTC CAACG--CGGCGGTCGCGCCGCTCA GGCGAGGG TCAGCGGCGCGTCCGCCGCACGATG TTGTCGTTCGCTAGC TERM 1096 1356528 - 1356577 + r 71 -13.6 -2.59714 | gap 2, overlap 1356525 1356576 AGCGAGGTGCTCCAA CG--CGGCGGTCGCGCCGCTCA GGCGAGGG TCAGCGGCGCGTCCGCCGCACG ATGTTGTCGTTCGCT RPD_1198 1357146 - 1356649 - | hypothetical protein TERM 1097 1357089 - 1357045 - G 74 -12.2 -3.53012 | opp_overlap 1357038 1357083 1357083 TTCCCGCGCGGCAAA GCCCTGCTTGGCG-AACGCCTC GTT GAG-CGTCGCGCCGAGCAGGCC CGCCAGCGGTTTGGC TERM 1098 1357622 - 1357638 + G 74 -12.3 -3.53012 | CCCTATACGGCGGCG GCGATCG CGG CGATCGC TTTCGGCCGCCAGAC RPD_1199 1357166 - 1358296 + | A/G-specific adenine glycosylase RPD_1200 1359558 - 1358425 - | DNA methylase N-4/N-6 RPD_1201 1359877 - 1360836 + | protein of unknown function, zinc metallopeptidase putative RPD_1202 1360930 - 1361481 + | molybdenum cofactor biosynthesis protein TERM 1099 1362216 - 1362239 + G 78 -10.3 -4.03234 | gap 1 TCGCCGATGAGTTCA GCGCC-GCAG GCGTG CTGCCGGCGC TTTATGTCGGGGCGA TERM 1100 1362283 - 1362271 - g 86 -6.2 -5.08824 | CGCCGAGGCAAAAAA CGGC GCATG GCCG CTCGGACTGGCCGGC RPD_1203 1361594 - 1362412 + | putative CoA transferase, subunit A RPD_1204 1362409 - 1363161 + | putative CoA transferase, subunit B RPD_1205 1363783 - 1363220 - | hypothetical protein RPD_1206 1363937 - 1365118 + | radical SAM family protein RPD_1207 1365133 - 1365576 + | glyoxalase/bleomycin resistance protein/dioxygenase RPD_1208 1365648 - 1366544 + | ribonuclease H TERM 1101 1367167 - 1367208 + G 77 -10.8 -3.84825 | overlap 1367172 GGCCCTGTTGCTGCT GC-CGATCGGCTTCGCGCTG TCGA CCGCGCGCAGCCGG-CGCGC TTTGATGTCGCTGGA TERM 1102 1367399 - 1367424 + G 74 -7.5 -4.25104 | ATCGGCGGGATGGCG CTGCTGGTGCT GCTC AACACCAGCCG TTTTGATCCGAGGCC RPD_1209 1366541 - 1368127 + | hypothetical protein RPD_1210 1368990 - 1368142 - | phage SPO1 DNA polymerase-related protein TERM 1103 1368253 - 1368280 + g 73 -12.7 -3.44051 | gap 1 GGCCGGGTGCAGCGT CGGCAGCGCGCG GATCG TGCGCGC-GCCG TTGTGGTAATCGAAC TERM 1104 1369162 - 1369142 - H 78 -4.7 -4.76802 | GGGAAAAATAAGAAA GAACACCTC TAG GAAACGTTC AAGAGTGCCTCTGCG RPD_1211 1369187 - 1370845 + | electron-transferring-flavoprotein dehydrogenase TERM 1105 1371250 - 1371296 + G 85 -17.9 -2.75647 | gap 1, overlap 1371279 GCCGGCAGCTATCTG GCCGCCCGTCACGCCAGCGTCG AGCG CGACGCCGCCGCGGCGG-CGGC GTTCTATCGTTCGGC TERM 1106 1371279 - 1371297 + G 89 -17.4 -3.59946 | overlap 1371250 CAGCGTCGAGCGCGA CGCCGCCG CGG CGGCGGCG TTCTATCGTTCGGCG RPD_1212 1371082 - 1372860 + | tetratricopeptide TPR_2 RPD_1213 1372880 - 1373764 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RPD_1214 1375045 - 1374035 - | farnesyltranstransferase RPD_1215 1375269 - 1375496 + | hypothetical protein TERM 1107 1375825 - 1375773 - g 79 -16.3 -3.06312 | opp_overlap 1375808, overlap 1375761 AAACGCCGCAGCCAA CGGCCTCCGCGCC-ACGGCCATCGC GCTGG ACGTTG-CCGCCGGCGCGGAGGCCT TCGCGGCCGCCGGTC RPD_1216 1375489 - 1376268 + | methyltransferase small TERM 1108 1377137 - 1377119 - g 75 -16 -2.70932 | opp_overlap 1377116 1377114 1377119, overlap 1377121 CTCGCTGGTGAAGGA CAGCCGCG GCG CGCGGCTG AAGGGCGCCGAGGAT RPD_1217 1376520 - 1377419 + | peptidase S49 RPD_1218 1377640 - 1377828 + | hypothetical protein glyQ 1378278 - 1379240 + | glycyl-tRNA synthetase subunit alpha RPD_1220 1379271 - 1379705 + | hypothetical protein TERM 1109 1382124 - 1382151 + G 77 -11.3 -3.86897 | gap 1, opp_overlap 1382124 1382125 AGCTGCTGGGCGAAA TCCG-CGCCGCG ACGCG CGCGGTGGCGGA TTTCTCGAAGATCCA glyS 1379705 - 1382173 + | glycyl-tRNA synthetase subunit beta TERM 1110 1382202 - 1382258 + F 100 -25.9 -3.53012 | CGGGGCGCTCGCGCA GCGAGCGAGCCCGGAATCCCGAGATGC CCT GAAGCTCCGGATTCCGGGTTCGCGCGC TTTGCGCGCGCCCCG RPD_1222 1382415 - 1383515 + | hypothetical protein TERM 1111 1383723 - 1383681 - f 100 -18.5 -3.57263 | gap 1, opp_overlap 1383686 1383689, overlap 1383686 1383689 ACTCGCAGGCGCAAA CAGAAGAACCCCGCCCGGGC GGGG GGCGGGGCGGGGTTCT-CTG ATCCAGTCGCAGCGT TERM 1112 1383719 - 1383686 - f 100 -18.1 -3.82202 | opp_overlap 1383686 1383689, overlap 1383681 1383689 CAGGCGCAAACAGAA GAACCCCGCCCGGGC GGGG GGCGGGGCGGGGTTC TCTGATCCAGTCGCA TERM 1113 1383686 - 1383719 + F 86 -18.1 -2.79796 | opp_overlap 1383686 1383681 1383689, overlap 1383689 CAGGCGCAAACAGAA GAACCCCGCCCGGGC GGGG GGCGGGGCGGGGTTC TCTGATCCAGTCGCA TERM 1114 1383716 - 1383689 - f 90 -14 -4.03586 | opp_overlap 1383689 1383686, overlap 1383686 1383681 GCGCAAACAGAAGAA CCCCGCCCGGGC GGGG GGCGGGGCGGGG TTCTCTGATCCAGTC TERM 1115 1383689 - 1383716 + F 81 -14 -3.54951 | opp_overlap 1383686 1383681 1383689, overlap 1383686 GCGCAAACAGAAGAA CCCCGCCCGGGC GGGG GGCGGGGCGGGG TTCTCTGATCCAGTC RPD_1223 1384027 - 1384182 + | hypothetical protein RPD_1224 1384273 - 1387356 + | pyruvate phosphate dikinase TERM 1116 1387389 - 1387418 + F 80 -14.4 -3.11687 | gap 1, opp_overlap 1387387 1387383, overlap 1387393 TCCTGATAACTGATT GC-AATGGCCGGG CAAGT CCCGGCCATTTGC TTGCGTGGTGATTGC TERM 1117 1387393 - 1387413 + F 86 -14 -3.94002 | opp_overlap 1387387 1387383, overlap 1387389 GATAACTGATTGCAA TGGCCGGG CAAGT CCCGGCCA TTTGCTTGCGTGGTG TERM 1118 1388627 - 1388643 + G 72 -13.7 -3.01712 | opp_overlap 1388623 TCACGCCAAGACGCC GGCCGAG CGG CTCGGCC TGTTCGACGCGAAGC TERM 1119 1388734 - 1388764 + G 79 -11.1 -3.90328 | overlap 1388735 AGGTGCGCGGCCAGA TCGCGGTTGCGCA GGTCG TGCTCAACCGCGC TTTCTCGGGCTTCTA TERM 1120 1388735 - 1388763 + G 73 -14.6 -2.93715 | overlap 1388734 GGTGCGCGGCCAGAT CGCGGTTGCGCA GGTCG TGCTCAACCGCG CTTTCTCGGGCTTCT RPD_1225 1387746 - 1389170 + | cell wall hydrolase, SleB RPD_1226 1390401 - 1389439 - | transposase, IS4 RPD_1227 1391409 - 1390534 - | nicotinate-nucleotide pyrophosphorylase TERM 1121 1390684 - 1390720 + g 75 -13.8 -3.28712 | gap 1 GACGCGGCCTTGAGC CATGGACA-CGGCGCGC TTCA GCGTGGCGATGTCCATG TTGTCGAGCAGCACG RPD_1228 1393061 - 1391442 - | L-aspartate oxidase RPD_1229 1394286 - 1393174 - | quinolinate synthetase TERM 1122 1393538 - 1393589 + g 77 -15.9 -3.0497 | gap 1, overlap 1393584 CGATAGCTGCGCAGC TCGTCGCCGGTGAAGCGCTCGTGC ACTTC GCACGCGCCCTTC-CAGGCGATGA TCTTCACCGTGGTCT TERM 1123 1394400 - 1394420 + H 77 -12.5 -3.55071 | TCTGGGCTTCCCGAT CCAGCGCAG ATG CTGCGCCGG TTTCGGGACATATGA TERM 1124 1395078 - 1395131 + G 100 -14.6 -4.37886 | gap 2, opp_overlap 1395076, overlap 1395126 TGACGCCGAAGGACG GCCCGGTCGTCG-TGA-CCGGCGCCG CAGG CGGCGTCGGCTCGGTGGCGATCGCGC TTTTGTCCAAGCTCG RPD_1230 1394627 - 1395613 + | zinc-binding alcohol dehydrogenase TERM 1125 1395637 - 1395656 + F 70 -7.8 -4.08706 | opp_overlap 1395637 1395636 1395633 1395632, overlap 1395633 ACTTTACCAACCAAG CTGCGCCA ATGT TGCCGCAG TTTGTATGGTAAGGA RPD_1231 1395713 - 1396306 + | hypothetical protein RPD_1232 1399041 - 1396342 - | hypothetical protein TERM 1126 1398364 - 1398313 - G 73 -14.3 -3.14344 | overlap 1398294 CACCGGCGTGACGAA GGCGGTGACGACGC-CGAGCCCGGC CAGC GCCGGGC-CGTGCAGCAGCGCCGCC GCCATGGTGCCGAGT RPD_1233 1400076 - 1399096 - | hypothetical protein RPD_1234 1400596 - 1400090 - | hypothetical protein RPD_1235 1401328 - 1400705 - | metal-dependent phosphohydrolase RPD_1236 1401607 - 1401777 + | hypothetical protein RPD_1237 1402421 - 1401768 - | DNA-3-methyladenine glycosylase I RPD_1238 1403299 - 1402418 - | glycine cleavage T protein (aminomethyl transferase) RPD_1239 1403417 - 1404751 + | dihydroorotase RPD_1240 1405025 - 1405180 + | hypothetical protein RPD_1241 1405547 - 1405284 - | hypothetical protein RPD_1242 1406068 - 1405679 - | hypothetical protein TERM 1127 1406086 - 1406096 + r 78 -6.8 -4.58395 | GGGGATCCCGTCGCG GCCT GAT AGGC TTTTTCGGCCGTACC RPD_1243 1406555 - 1406130 - | NUDIX hydrolase RPD_1244 1407070 - 1406561 - | hypothetical protein RPD_1245 1407132 - 1407911 + | hypothetical protein TERM 1128 1407887 - 1407905 + T 73 -8.8 -4.10429 | opp_overlap 1407870 1407869, overlap 1407890 GGCGTCATCCGATGA CGACGGGC AGG GCTCGTTG TTTTAACGGATCGTT RPD_1246 1409445 - 1407976 - | FAD linked oxidase-like TERM 1129 1409189 - 1409216 + g 70 -10.6 -3.55444 | gap 1 AGCGCGACGCGCGTC TCGCTGGCGAGCT TGC AGATCGCC-GCGA TTTCCGCCGTCGAGC RPD_1247 1410484 - 1409492 - | Sua5/YciO/YrdC/YwlC TERM 1130 1410442 - 1410401 - G 73 -14.3 -3.2048 | gap 1, opp_overlap 1410423 1410424 1410426, overlap 1410392 1410402 CGGAAATCCGATCAA TCCGCCGCCGCGCAGGC-AC TCC GCAGCCTCCGCGGCCGCGGC CGGCCCGGCCGGGAG TERM 1131 1410441 - 1410402 - G 85 -17.8 -2.51966 | gap 1, opp_overlap 1410423 1410424 1410426, overlap 1410401 1410392 GGAAATCCGATCAAT CCGCCGCCGCGCAGGC-AC TCC GCAGCCTCCGCGGCCGCGG CCGGCCCGGCCGGGA TERM 1132 1410809 - 1410844 + r 100 -17.7 -4.00348 | gap 1, overlap 1410800 1410811 CGGCGGGCACCGGGG GC-GCTTCGGTCCGGA GCGAA TCCGGACCGAGGCTGC TTTGGTTGCTTGGCC TERM 1133 1410811 - 1410841 + r 91 -19.1 -3.04696 | overlap 1410800 1410809 GCGGGCACCGGGGGC GCTTCGGTCCGGA GCGAA TCCGGACCGAGGC TGCTTTGGTTGCTTG RPD_1248 1412149 - 1410878 - | acyl-CoA dehydrogenase-like TERM 1134 1411705 - 1411718 + g 89 -3.7 -5.26119 | TCTCGCCGGCCAGCA GCGGC TTCA GCCAC TTTTCTTTTTGCGCG RPD_1249 1412581 - 1413300 + | aspartate racemase TERM 1135 1413914 - 1413884 - g 79 -3.2 -5.06414 | gap 1, overlap 1413885 GGCTCCGAAGAAAAA GGCCAGCGCCTGA AGGAGG TC-GGCGCCGACG AAGTCATCCTCTACA RPD_1250 1413317 - 1414336 + | zinc-binding alcohol dehydrogenase TERM 1136 1414727 - 1414701 - g 79 -8.7 -4.30576 | gap 1, overlap 1414702 1414703 CGTCCATGACGAAAA GGGCGCCCTGAT CGCG ATC-GGGCGCGC CACCTATGCAATCTG RPD_1251 1414333 - 1414743 + | phenylacetic acid degradation-related protein RPD_1252 1414771 - 1415532 + | short-chain dehydrogenase/reductase SDR TERM 1137 1415528 - 1415585 + F 81 -7.7 -4.41047 | overlap 1415530 1415530 GCGGCGGTCAGCGGC TATGATCTCGATGTCCGGCAGCGAATG GTTT TGTTCGATGCCGGACATCGACGGAAGA TTTTGCTTCCGCGCT TERM 1138 1415592 - 1415617 + F 83 -7.6 -4.60487 | gap 1, overlap 1415594 GACGGAAGATTTTGC TTCCGCG-CTG CTCAT CAGGCGCGGGA TTTTTCAAAGTGCTG RPD_1253 1415713 - 1416177 + | regulatory proteins, AsnC/Lrp TERM 1139 1416566 - 1416553 - g 71 -9.5 -3.85864 | CGACCACCAGAACAA GGCCG ACGT CGGCC TGTCGCTGGCGCGCG RPD_1254 1416245 - 1417528 + | ABC-type branched-chain amino acid transport systems, periplasmic component TERM 1140 1417595 - 1417631 + F 86 -13.6 -3.84451 | opp_overlap 1417616, overlap 1417596 GCTTCTGGACTCTCA CCCCGCCATGCCCGGC ACAAG GCCGGGCATGGCGAAC TTTGAGTTTGCCGAC TERM 1141 1417596 - 1417630 + F 87 -17.1 -2.90349 | opp_overlap 1417616, overlap 1417595 CTTCTGGACTCTCAC CCCGCCATGCCCGGC ACAAG GCCGGGCATGGCGAA CTTTGAGTTTGCCGA RPD_1255 1417710 - 1419230 + | AMP-dependent synthetase and ligase RPD_1256 1419473 - 1419778 + | hypothetical protein TERM 1142 1419815 - 1419793 - T 100 -20.6 -3.64371 | AACGGAGATTGCAAA CCCGGTCGCG CCG CGCGACCGGG TTCAGATGCGCGTAT TERM 1143 1419934 - 1419889 - T 76 -8.6 -4.1891 | gap 3, opp_overlap 1419890 GCGTCGGAACATAAA GTTAGAGC-T--CCGGTTCTGAT TCC ATCAGAACCGGAAAAGCTCTAGC CCGCAACAGTATCGC RPD_1257 1420970 - 1419930 - | aminotransferase, class I and II RPD_1258 1421107 - 1420967 - | hypothetical protein RPD_1259 1421369 - 1421605 + | hypothetical protein RPD_1260 1421688 - 1422380 + | Crp/Fnr family transcriptional regulator RPD_1261 1422480 - 1422671 + | hypothetical protein TERM 1144 1422724 - 1422692 - f 95 -20 -3.28791 | opp_overlap 1422692 AGGGGTTTGTTAGAA CTCTCGGAATCGGG TACGG CCCGATCCCGAGAG TTGTTCTCTTTCAGG TERM 1145 1422692 - 1422724 + F 100 -18.5 -4.03586 | opp_overlap 1422692 AGGGGTTTGTTAGAA CTCTCGGAATCGGGT ACG GCCCGATCCCGAGAG TTGTTCTCTTTCAGG TERM 1146 1423146 - 1423091 - g 79 -4.4 -4.82901 | gap 1, opp_overlap 1423138 1423140, overlap 1423138 GTTCGCGCAGAAAAA GGCCGCAGCGGAAGCCGCCAATTCCGC TGT GCGGTAGCCGCAGCCAAC-CCGCAGCC GCGCGGGTTGCGTCG RPD_1262 1422747 - 1423127 + | alkylhydroperoxidase AhpD core TERM 1147 1423140 - 1423175 + F 78 -15.5 -2.6891 | gap 1, opp_overlap 1423091 1423138, overlap 1423138 TAGCCGCAGCCAACC CGCAGC-CGCGCGG GTTGCGTCG CCGCGCGCGCTGCG TCATATGGTCTACTC TERM 1148 1424080 - 1424043 - g 74 -12.5 -3.62046 | GCATTTCCGCAACAA CGGCTCCGGCGTGCTGA TCTA TCTGCGCGACGGCGCCG CCGGCGTTCCCGTCG RPD_1263 1423180 - 1424289 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1149 1425303 - 1425258 - g 77 -11 -3.78934 | GCTGGTGCAGAAGAA GCTCGCCGACATGCAGACCG AGATCG CGCTCGGCGTGCAGGCGAGC TTGCGCGTCGGCCGG RPD_1264 1424347 - 1425561 + | acyl-CoA dehydrogenase-like TERM 1150 1426189 - 1426163 - g 70 -10 -3.66654 | opp_overlap 1426164, overlap 1426139 1426164 GACCGCAATTTCAAA CCCGACGTCGCG ATC CGCGACGGCGAT GTGATCGAAGGCGAC RPD_1265 1425749 - 1426681 + | beta-lactamase-like TERM 1151 1426960 - 1426993 + T 75 -12.3 -3.59979 | gap 1 CTTCGGCGCCGCCTT GCCCTTCGCCGGCTGC TTT GCGGCCGG-GTCGGGC TTTGGCGTCGGCGCG RPD_1266 1427832 - 1426939 - | hypothetical protein RPD_1267 1429772 - 1428144 - | putative acyl-CoA synthetase RPD_1268 1429890 - 1430849 + | extensin-like TERM 1152 1430844 - 1430824 - T 100 -11.8 -4.99645 | opp_overlap 1430824, overlap 1430810 AGGCGACAAAGAAAA GGCGCCGG ACTGA CCAGCGCC TTTGAGCATTTTCGA RPD_1269 1431610 - 1430936 - | ErfK/YbiS/YcfS/YnhG TERM 1153 1431675 - 1431655 - H 72 -3.9 -4.57341 | opp_overlap 1431659, overlap 1431659 AACGCGCCGGAAAAA GACATCGCC CAT GACGATTCC TAAGGCTTTAGTATC RPD_1270 1431944 - 1432924 + | Mg2+ transporter protein, CorA-like RPD_1271 1433444 - 1433115 - | hypothetical protein TERM 1154 1433917 - 1433888 - R 74 -13.5 -2.87564 | overlap 1433895 1433906 GGATTGCGGGACAGA TCACGAAGGCCGG GAAA CCGGCCGGCGTGA TAACCCGGCGTGGCC TERM 1155 1433910 - 1433895 - R 72 -11.8 -3.26545 | overlap 1433888 1433906 GGGACAGATCACGAA GGCCGG GAAA CCGGCC GGCGTGATAACCCGG TERM 1156 1434318 - 1434306 - R 71 -9.1 -3.76393 | AGAGTTGAATCCAAA CCTCG CGA CGAGG CACGGCCGTGCACGA TERM 1157 1434564 - 1434546 - R 78 -6.7 -4.56597 | gap 1, overlap 1434547 1434548 CCTTGCCTTGAAAAA CGCCCGCA GCAT TGCGG-CG GCTTCGCGCTCGCCG RPD_1272 1434971 - 1434525 - | CMP/dCMP deaminase, zinc-binding TERM 1158 1434758 - 1434779 + g 81 -8 -4.58283 | gap 1, overlap 1434758 1434759 CGTAGAGATCGCAGT C-CGGCAGC CGCTC GCTGCCGAG TTTTTGCGCGGCTTC TERM 1159 1435215 - 1435170 - g 79 -4 -4.89852 | gap 3, overlap 1435173 1435174 CGACACCGATAAAAA CAACGCCTCCGCGCGGGGCCG CCGCGAT CGA-CCCG-GCGGAGGCAA-G ACGTCTTCGGGCGGT TERM 1160 1435213 - 1435173 - g 95 -11.2 -4.5448 | gap 2, overlap 1435170 1435174 CACCGATAAAAACAA CGCCTCCGCGCGGGGCCG CCGCGAT CGA-CCCG-GCGGAGGCA AGACGTCTTCGGGCG TERM 1161 1435212 - 1435174 - g 71 -12.5 -3.31603 | gap 2, overlap 1435173 1435170 ACCGATAAAAACAAC GCCTCCGCGCGGGGCCG CCGCGAT CGA-CCCG-GCGGAGGC AAGACGTCTTCGGGC TERM 1162 1435424 - 1435385 - g 77 -5.6 -4.63218 | gap 1 CCTTCGCCAAGAAAA CCTTCGGCGGCGA-CGC CAAGCGC GCGTTCGGCGGCGAGGG CAAGCGGCCTTATGT TERM 1163 1435609 - 1435596 - g 75 -9.5 -4.08216 | overlap 1435597 GGAGTTCGGCGAAAA GCGCG CATT CGCGC CCCGCGAGGGCGGCG TERM 1164 1435720 - 1435687 - g 90 -18.1 -3.53224 | GATCGGCCGTTCAAA CGCGACGATCGCGCC CCGC GGCGCGACCGCGGCG ACGACGCCCGCCCGG RPD_1273 1435147 - 1437534 + | pseudouridine synthase Rsu RPD_1274 1437537 - 1438094 + | hypothetical protein RPD_1275 1439222 - 1438266 - | regulatory protein, LuxR TERM 1165 1439334 - 1439283 - R 74 -13 -3.34222 | gap 1, opp_overlap 1439284, overlap 1439286 AGGATCATCCGACAA GCATCCAGAGCATCCGGAACGACGA CGC CCGTCGATCCGGATGC-CAGGACAA GTTCGGTCGCTGCGG TERM 1166 1439331 - 1439286 - R 91 -19.1 -2.84 | gap 1, opp_overlap 1439284, overlap 1439283 ATCATCCGACAAGCA TCCAGAGCATCCGGAACGACGA CGC CCGTCGATCCGGATGC-CAGGA CAAGTTCGGTCGCTG RPD_1276 1440462 - 1439350 - | histone deacetylase superfamily protein RPD_1277 1441737 - 1440745 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1167 1441098 - 1441117 + g 70 -10.6 -3.61398 | overlap 1441090 GCGTCAGCCGCTCGC CGACGCCG TGAT CGGCGACG TTCTTCGCGGCGACC RPD_1278 1442204 - 1441737 - | molybdopterin biosynthesis MoaE RPD_1279 1442480 - 1442229 - | molybdopterin converting factor, subunit 1 TERM 1168 1442273 - 1442256 - G 70 -4 -4.57073 | CATTGGCGGGAAAAA GGCGAC TTCGCG GGCGCC CTTGATCGGCGTCTC RPD_1280 1443142 - 1442477 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 1445324 - 1443237 - | excinuclease ABC subunit C RPD_1282 1445629 - 1446252 + | putative outer membrane protein TERM 1169 1446299 - 1446319 + T 100 -14 -5.54894 | CTCGGCGATCATCAT TCCCGGCC CTTGT GGCCGGGA TTTTTTTGCTGGATT TERM 1170 1446400 - 1446421 + T 77 -15.9 -2.66964 | opp_overlap 1446394, overlap 1446397 CACAATTGATCGTCG TGGCGCACC ATCC GGTGCGCCA TCATCTGCTACATAA RPD_1283 1446717 - 1446505 - | cold-shock DNA-binding domain protein RPD_1284 1447833 - 1446976 - | hypothetical protein TERM 1171 1448168 - 1448188 + H 83 -9.7 -4.25104 | overlap 1448156 1448156 GGGCTCCGGATGGGG CCGGACGTT TCG AACGTCGGG TTTTCCTGAGAACCA RPD_1285 1448264 - 1448659 + | response regulator receiver TERM 1172 1448713 - 1448692 - T 86 -12.9 -4.09864 | opp_overlap 1448692 ACCGAGTTTTCAAAA CGCGCTCCG GCCA CGGGGCGCG TTTTTGTTTTTGCGC TERM 1173 1448692 - 1448713 + T 100 -15.1 -5.61881 | opp_overlap 1448692 ACCGAGTTTTCAAAA CGCGCTCCG GCCA CGGGGCGCG TTTTTGTTTTTGCGC TERM 1174 1448744 - 1448773 + T 73 -12.9 -3.18571 | gap 1, overlap 1448742 1448740 1448738 CGTCCCGCGCCGTCA TTCCGGGGTGCGCG AAG CGCGAAC-CCGGAA TCTCTCTTTGCACCA RPD_1286 1449717 - 1448863 - | HAD family hydrolase RPD_1287 1451202 - 1449730 - | putative cylclic diguanylate phosphodiesterase RPD_1288 1452646 - 1451300 - | beta alanine--pyruvate transaminase TERM 1175 1452899 - 1452885 - g 85 -7.8 -4.79075 | overlap 1452893 1452894 AAAAACCGAAGAAAA CGCAGA AAC TCCGCG CCCGGCTGCCGCGCG TERM 1176 1453067 - 1453082 + G 77 -7.5 -4.42386 | CTGCCCGACCAGGAC CGCCC CAACGA GGGCG TTTTCTCGCTGCAGG hisS 1452863 - 1454458 + | histidyl-tRNA synthetase TERM 1177 1454480 - 1454502 + F 74 -14.9 -2.64155 | opp_overlap 1454480, overlap 1454476 1454477 AAGGGGCGGATTGAA CCCTCTCCC CTTGT GGGAGAGGG TCGCTTTGCGAAGCA TERM 1178 1454502 - 1454480 - f 78 -14.9 -3.05715 | opp_overlap 1454480 1454476 1454477 AAGGGGCGGATTGAA CCCTCTCCC CTTGT GGGAGAGGG TCGCTTTGCGAAGCA RPD_1290 1454653 - 1454856 + | 4-oxalocrotonate tautomerase RPD_1291 1455026 - 1455475 + | hypothetical protein RPD_1292 1457535 - 1455472 - | hypothetical protein TERM 1179 1456324 - 1456306 - G 73 -5.9 -4.39426 | overlap 1456308 CAGATGCGCATAAAA CGGCTTC TCGGT GACGCCG ACCGGCTCCGCCGGC TERM 1180 1456534 - 1456585 + g 73 -13.1 -3.28712 | opp_overlap 1456546 CTGCTGGAACAGCTC GCGGGTCGGAAACG-CGATCAGCGA CAAT TCGTTGATCGGCG-TGCCGTCCTGC TTCTCCGGCGGCCGC TERM 1181 1456983 - 1457008 + g 72 -13.3 -3.14344 | opp_overlap 1456963 1456962, overlap 1456987 AGCGCGGTGCGGCGA CGATCGCGATC CGGC GATCGCGTTCG TTGCTGCGCCCGGTG RPD_1293 1460507 - 1457682 - | double-transmembrane region-like TERM 1182 1459553 - 1459574 + g 79 -11.5 -3.86822 | opp_overlap 1459550 CGCCGGAGACGATGC CGATGGCGC GGCG GCGCCAGCG TTTGTCGAGCAATTG RPD_1294 1461442 - 1460504 - | hypothetical protein RPD_1295 1462446 - 1461442 - | ATPase TERM 1183 1463147 - 1463183 + G 70 -10.2 -3.68325 | gap 2 CGTGCCCTATCTGCA CGTCCGCGCCGACCTCTG GGC CA-AGGT-GACGCGGGCG TTGTATTACGATCTG RPD_1296 1462698 - 1463309 + | hypothetical protein RPD_1297 1463359 - 1464003 + | NUDIX hydrolase RPD_1298 1464000 - 1464263 + | hypothetical protein TERM 1184 1465309 - 1465332 + G 75 -9.4 -4.13767 | overlap 1465325 1465326 CGACCTGATTGCGTT GCCGCAGCGC TGGC GCGCGCCGGC TTTTCCGCTGAAAGC RPD_1299 1464260 - 1465513 + | polynucleotide adenylyltransferase region RPD_1300 1466152 - 1465520 - | hypothetical protein RPD_1301 1466618 - 1466166 - | tRNA/rRNA methyltransferase (SpoU) TERM 1185 1467284 - 1467297 + G 75 -3.1 -4.84359 | gap 1, overlap 1467286 CGATCGCGCATGAAG GCCTGT TCG AC-GGC TTTTTCTGCCCCTGC RPD_1302 1466896 - 1467423 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit RPD_1303 1467464 - 1469533 + | cytochrome c1 TERM 1186 1469576 - 1469589 + F 100 -9.5 -5.4833 | opp_overlap 1469576 ATCGCGTAACAGAAA GCCCC TTCG GGGGC TTTTTTGTTGCGTCG TERM 1187 1469589 - 1469576 - f 79 -9.5 -4.19177 | opp_overlap 1469576 ATCGCGTAACAGAAA GCCCC TTCG GGGGC TTTTTTGTTGCGTCG RPD_1304 1469698 - 1470372 + | carboxymethylenebutenolidase RPD_1305 1470463 - 1470684 + | hypothetical protein TERM 1188 1470730 - 1470709 - T 100 -17.3 -6.25578 | ACCAAACAAAAAAAA GCGGGGCGA TCGC TCGCCCCGC TGCTGACAGGAGAGC RPD_1306 1471475 - 1470756 - | short-chain dehydrogenase/reductase SDR TERM 1189 1471206 - 1471220 + g 74 -12.8 -3.53811 | GATCGAGCCGAGCCG GCCGCC GCC GGCGGC TTTCGGCGAGATCGC RPD_1307 1472167 - 1471529 - | pyridoxamine 5'-phosphate oxidase TERM 1190 1472725 - 1472667 - g 70 -10.7 -3.5764 | overlap 1472668 AAGGGCATTGGGAAA TCCGCTCGCTGAAGCCCTGGCGGCGCA GCTGA CGCGCCGCGAAGGCGGCCGAAAGCGGT TGCAAAAGCGACACA RPD_1308 1472288 - 1472698 + | hypothetical protein TERM 1191 1472780 - 1472745 - f 85 -6 -5.01546 | opp_overlap 1472757, overlap 1472757 AAAGCGACACAAAAA CCCCAGATGAAACGCC AATG GGCGTTCTGCCCAGGG TTCGAATTCCTTGAA RPD_1309 1472809 - 1473780 + | chaperone DnaJ-like TERM 1192 1473876 - 1473823 - T 76 -9.5 -4.07568 | gap 1 GTGGCCCGGCCAAAA GGGGAGCGGCCTCGGCGCGGGG GATCAGCGCAA CCCCG-GCCAAGGCCGCTGTGC GTCGATCGGCGGATC RPD_1310 1474809 - 1474030 - | hypothetical protein RPD_1311 1475388 - 1474831 - | sigma-70, region 4 type 2 RPD_1312 1475523 - 1476341 + | enoyl-(acyl carrier protein) reductase RPD_1313 1476458 - 1477066 + | phosphoglycerate mutase RPD_1314 1477174 - 1478259 + | chorismate synthase clpS 1478648 - 1478343 - | ATP-dependent Clp protease adaptor TERM 1193 1478794 - 1478815 + H 71 -5.8 -4.30576 | overlap 1478804 GACTGAAACGTGATC GCGGCGGA ACCGGC TTTGCCGC TTTTCGTCGTCAGCA RPD_1316 1478872 - 1479717 + | hypothetical protein TERM 1194 1479718 - 1479750 + T 86 -17.9 -2.70932 | opp_overlap 1479745 1479749, overlap 1479704 AGATGGGGGCGGTGA CCTTCCATCTTCTCC CCG GTAGAAGATGGAAGG TCATTCCGGGGCGCG RPD_1317 1481228 - 1479825 - | carotenoid oxygenase TERM 1195 1479898 - 1479942 + g 78 -10 -4.09685 | gap 2, opp_overlap 1479888 1479926 ACCAAGGCGATCGGG CCGCCGGCGATGTCGGCGGCGT TGA ACACCGC-GAGGTCGCTG-CGG TTTTCGCAGCTGCGC RPD_1318 1482642 - 1481266 - | hypothetical protein TERM 1196 1481994 - 1482029 + g 100 -16.8 -4.44667 | gap 1, overlap 1481995 CGAGTTCGCGCACCT TCGCCGAAC-GCGCGCC GTC GGCGCGCTGCTCGGCGC TTTGTTGTTCAGAAC TERM 1197 1481995 - 1482028 + g 100 -20.3 -3.26318 | gap 1, overlap 1481994 GAGTTCGCGCACCTT CGCCGAAC-GCGCGCC GTC GGCGCGCTGCTCGGCG CTTTGTTGTTCAGAA RPD_1319 1483744 - 1482635 - | hypothetical protein RPD_1320 1484812 - 1483760 - | hypothetical protein TERM 1198 1484046 - 1484003 - G 75 -9.5 -4.09963 | gap 2 GCCGAAGAACAACAA TGGCAGCGAGCGCCGCAGCGC AACG ACCCAGC-GCGCCCGC-GCCA GCGCGTCGTGATAGG TERM 1199 1484925 - 1484960 + r 82 -14.7 -3.32022 | overlap 1484909 GCGCCCTCGATGAGG GGAGCGTCGCTTCAC ATAATC GTGCGGCGGCGCTCC TTCCTGTGTCAGGCG RPD_1321 1485952 - 1484969 - | alpha/beta hydrolase fold RPD_1322 1487663 - 1486155 - | MlrC-like TERM 1200 1486694 - 1486728 + g 75 -13.5 -3.4376 | opp_overlap 1486694, overlap 1486664 1486717 CCAGCGCGCGCAACA TCCCGGTGGTGTCGG AGTCG CCGCCGGCACCGGGA TTGTCCTGGGTATCT TERM 1201 1487729 - 1487755 + r 86 -15.1 -3.57144 | opp_overlap 1487712 1487711 1487729 GACACGGGGCAAGCA GGCCCCGCCGT CTCAC ACGGCCGGGCC TTTCGCCATCGCGGA TERM 1202 1487755 - 1487729 - R 78 -15.1 -2.72049 | opp_overlap 1487729, overlap 1487712 1487711 GACACGGGGCAAGCA GGCCCCGCCGT CTCAC ACGGCCGGGCC TTTCGCCATCGCGGA RPD_1323 1489593 - 1487908 - | acyl-CoA synthetase RPD_1324 1491280 - 1489802 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1203 1490049 - 1490063 + g 75 -9.2 -4.07885 | overlap 1490051 1490052 TCGATGGTCACCGCG GTCCGG CTG CCGGGC TTTTCGCCGGCGGTC TERM 1204 1490383 - 1490423 + g 80 -15.5 -3.30124 | gap 1 TGGGTCCGCACATCT CCTCGCGCAGATTCGGCG GGGTCG CGTCG-ATCGGCGCGAGG TTGTCGACAGTGCCG TERM 1205 1491463 - 1491500 + r 70 -12 -3.21218 | overlap 1491463 GCTCAGAGCCTGACT G-GCGCATCGTCGGTCGC GGTC GCGACCG-CGGCGCGCGC TTCCTCCTGCACCAT RPD_1325 1493258 - 1491450 - | cyclic beta-1,2-glucan ABC transporter TERM 1206 1491793 - 1491837 + g 71 -12.6 -3.25823 | opp_overlap 1491818, overlap 1491794 CGGGCGATCGACAGC CGCTGGCGCTCGCCGCCGGA CAGCA TCCGGCCGCGCTCGCCCGCA TTGGTGTCGAAGCCG TERM 1207 1491794 - 1491836 + g 77 -16.1 -2.55351 | opp_overlap 1491818, overlap 1491793 GGGCGATCGACAGCC GCTGGCGCTCGCCGCCGGA CAGCA TCCGGCCGCGCTCGCCCGC ATTGGTGTCGAAGCC TERM 1208 1493616 - 1493657 + H 100 -16 -4.88293 | GACATGGTCACCATG CACTTGCGATCCGAGTTC CAGATC GGGCTTGGATCGCGAGTG TTTCTTTTTGCCGTT RPD_1326 1493690 - 1494079 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPD_1327 1494076 - 1494702 + | NADH-quinone oxidoreductase, B subunit TERM 1209 1495267 - 1495254 - g 70 -2.3 -4.59773 | overlap 1495255 GCTGATCCGGAAAAA TTCGG CCTG CCGAC GCATCGTGACGGCGT RPD_1328 1494699 - 1496444 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D RPD_1329 1496441 - 1496914 + | NADH dehydrogenase subunit E RPD_1330 1496911 - 1498197 + | NADH dehydrogenase (quinone) TERM 1210 1499097 - 1499051 - g 77 -10.7 -3.86015 | gap 2, opp_overlap 1499072 GACGCCGCTGATAAA CGGCGAAGCGGCCGGCGAGCATG ACG CCTGCGCGGCGGC-GCA-CGCCG CGGTCGCCGAAGGCG TERM 1211 1499381 - 1499330 - g 73 -14.2 -3.18735 | gap 1, opp_overlap 1499375, overlap 1499332 CGAAGATCTCACCAA CACGTCCCCGCGCATCGCGCTGGCG TTG CGCCAGACCG-CGCGCGGCGCCGAG CGCGAGCTCGCCGCG TERM 1212 1499379 - 1499332 - g 78 -15.4 -3.15346 | gap 1, opp_overlap 1499375, overlap 1499330 AAGATCTCACCAACA CGTCCCCGCGCATCGCGCTGGCG TTG CGCCAGACCG-CGCGCGGCGCCG AGCGCGAGCTCGCCG RPD_1331 1498194 - 1500812 + | NADH dehydrogenase subunit G TERM 1213 1501539 - 1501552 + G 70 -2.3 -4.57569 | overlap 1501517 TGCTGGTGTCGGCCC TGGCG GTGA CGCTG TTTTTCGGCGGCTGG RPD_1332 1500809 - 1501768 + | respiratory-chain NADH dehydrogenase, subunit 1 RPD_1333 1501765 - 1502280 + | NADH dehydrogenase subunit I TERM 1214 1502662 - 1502629 - g 74 -14.6 -3.02144 | gap 2, opp_overlap 1502627 1502622 GCATCGCGGCCAACA CCG-CC-GCCGCGCCG GTGT CGGCGCAGCAGGTCGG GCGTCTGCTGTTCGG RPD_1334 1502277 - 1502783 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 TERM 1215 1502980 - 1503018 + G 76 -8.2 -4.2461 | gap 3, overlap 1502982 1502986 GATGTTCATTCTGGT GCTGACGCTCG-CCGCGGC CGAG GTCGCGGTCGGGC-TC-GC TTTGTTCCTGCGCAT RPD_1335 1502780 - 1503088 + | NADH-ubiquinone oxidoreductase, chain 4L TERM 1216 1504068 - 1504091 + G 83 -16 -3.57144 | GGCGCTCGGGCTCGG TGCGCCGGCG GTGG CGCTGGCGCA TTTCGCGATCCACGC TERM 1217 1504946 - 1504973 + G 72 -5.4 -4.37658 | overlap 1504947 TCGGACGGATTCTGA TTGCCGTCGCGC GGGT GTTCGTCGGCAG TTTTGTCGCGCGCTT RPD_1336 1503085 - 1505157 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 1218 1506110 - 1506158 + G 77 -3.8 -4.77036 | gap 1, overlap 1506114 1506114 GCAGTATGCGCTGGC CGGCGCTGCGGTCGAG-ATGA TCGCGCAT TCGTTCTCGGCCTCGGCTCTG TTTTTGCTGATCGGC RPD_1337 1505148 - 1506593 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 1219 1506750 - 1506776 + G 77 -15.9 -3.01712 | gap 1 TGTTGCTGCGGGTCG GCGCACCG-GCG GCGC CGCTCGGTGCGC TGTTCACGGACGACG TERM 1220 1507789 - 1507810 + G 70 -2.2 -4.57569 | gap 1, overlap 1507789 1507790 CGGCTTCTATTACTA CG-CGCGGT TCTTC ACGGCGCCG TTTTTCGGCCAGTCG RPD_1338 1506590 - 1507954 + | NADH dehydrogenase (quinone) TERM 1221 1508000 - 1507960 - T 100 -21.4 -2.78384 | gap 2 GGCGCCGTGATCACA CCATCAGGTGGGTTGGCGCG AAG CGCGC-AACCC-CCTGATGG TCGCGTCAAGCCGCT RPD_1339 1509313 - 1508006 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 1222 1508714 - 1508762 + g 73 -13.1 -3.30124 | gap 1, opp_overlap 1508713 1508710, overlap 1508716 1508717 CGCCGAATACACCAC GATCGCGGCGCCG-TGCTCGAG CGGCTT CACCAGCAGCGGCGCCGCGGTG TTGTCGACGATCAGC TERM 1223 1508716 - 1508760 + g 80 -15.7 -3.21924 | gap 1, opp_overlap 1508713 1508710, overlap 1508714 1508717 CCGAATACACCACGA TCGCGGCGCCG-TGCTCGAG CGGCTT CACCAGCAGCGGCGCCGCGG TGTTGTCGACGATCA TERM 1224 1508717 - 1508759 + g 79 -17 -2.5294 | gap 1, opp_overlap 1508713 1508710, overlap 1508716 1508714 CGAATACACCACGAT CGCGGCGCCG-TGCTCGAG CGGCTT CACCAGCAGCGGCGCCGCG GTGTTGTCGACGATC TERM 1225 1509073 - 1509107 + g 81 -10.6 -4.08216 | gap 1 CCGATGCGACCGCGA GCGCGGCGACGCCGC CTTCCA GCGCCG-CGACGCGC TTTTCGAGCACGTCG TERM 1226 1509590 - 1509571 - R 100 -15 -4.72986 | TATCTGCAGCAAAAA GGCCGCCA TTGC TGGCGGCC GATCCGTCGAGAATG fixK 1510349 - 1509660 - | transcriptional regulator FixK RPD_1341 1510936 - 1510541 - | response regulator receiver fixJ 1511636 - 1511019 - | response regulator FixJ RPD_1343 1513158 - 1511626 - | PAS/PAC sensor signal transduction histidine kinase TERM 1227 1512572 - 1512615 + g 77 -13.1 -3.58726 | TTGTCGTGGCGTGAC GCGTCCGGCCGGGGCATCA AGATGC TGATGTTCTGGCCGATCGC TTCTCTCTCGGACAG TERM 1228 1513273 - 1513237 - R 100 -13.9 -4.77165 | gap 2, overlap 1513239 CGGTGCACAACAAAA CG-CG-CTGCGGCAAAC CATCC GTTTGCCGCAGTCGTCG AGCCTGTCAAGCCCC TERM 1229 1513270 - 1513239 - R 77 -15.3 -2.67008 | gap 1, overlap 1513237 GTGCACAACAAAACG CG-CTGCGGCAAAC CATCC GTTTGCCGCAGTCG TCGAGCCTGTCAAGC RPD_1344 1514044 - 1513313 - | putative signal-transduction protein with CBS domains TERM 1230 1513836 - 1513852 + g 78 -13.7 -3.61178 | overlap 1513831 GGGCCGAGCAGCAGC CGCAGCC AGC GGCTGCG TTTGCGCTGGGTGCC RPD_1345 1514968 - 1514135 - | hypothetical protein TERM 1231 1514694 - 1514736 + g 79 -13.2 -3.67976 | overlap 1514695 1514721 ACCGGAGTGTCGCAG ATGCTGCGCGCGCCATGGGT GAT ACCCGCGGCGCGGGCCGCGA TTTCGAATTGGTCCA TERM 1232 1514695 - 1514735 + g 77 -16.7 -2.80464 | overlap 1514694 1514721 CCGGAGTGTCGCAGA TGCTGCGCGCGCCATGGGT GAT ACCCGCGGCGCGGGCCGCG ATTTCGAATTGGTCC RPD_1346 1515153 - 1515977 + | hypothetical protein RPD_1347 1516420 - 1516088 - | hypothetical protein RPD_1348 1516634 - 1518394 + | Poly-beta-hydroxybutyrate polymerase-like RPD_1349 1519941 - 1518376 - | hypothetical protein TERM 1233 1518847 - 1518798 - G 79 -16.3 -3.04144 | gap 1, opp_overlap 1518845 CGTCGACGCCGAACA GCCGCTTGCGCGCGACGTCGGAGC GCA GCACCACCG-CGCCCGGAAGCGGC GAGATGTGGCCGGCG RPD_1350 1520090 - 1520596 + | CBS domain containing membrane protein TERM 1234 1522259 - 1522302 + G 83 -13.8 -3.85698 | gap 1, overlap 1522260 CGATGGTCCCGACGC TGGCTGCGGCCGATGCCGACG AGG CGGTGGCGTGGGCCG-AGCCG TTTCTGGCGCAGGGC TERM 1235 1522260 - 1522301 + G 73 -15.1 -2.91276 | gap 1, overlap 1522259 GATGGTCCCGACGCT GGCTGCGGCCGATGCCGACG AGG CGGTGGCGTGGGCCG-AGCC GTTTCTGGCGCAGGG RPD_1351 1520728 - 1523451 + | GCN5-related N-acetyltransferase RPD_1352 1524004 - 1523525 - | hypothetical protein TERM 1236 1523846 - 1523874 + g 70 -11 -3.53012 | gap 1 TTCGCCTTCCGGATG TCCGGGCTCGCGC GCAA GCTCGAGCC-GGA TTTGGCGGAAGCGCG RPD_1353 1524114 - 1525250 + | hypothetical protein RPD_1354 1525253 - 1526029 + | ABC transporter related RPD_1355 1526037 - 1527209 + | hypothetical protein RPD_1356 1527456 - 1527172 - | putative cytochrome c, class I RPD_1357 1527675 - 1528394 + | Crp/Fnr family transcriptional regulator TERM 1237 1529172 - 1529187 + G 71 -3.2 -4.65168 | overlap 1529137 TCGCGCTTCCGGTCG GCATCG TCGC CAATGC TTTTTCCGATGTGAT RPD_1358 1528442 - 1529701 + | Ion transport protein TERM 1238 1529731 - 1529717 - T 83 -6.4 -4.83615 | CAGGCCGTAGAAAAA GAGAAC AAC GTTCCC GTTCCGATCCCACTT RPD_1359 1530120 - 1529800 - | hypothetical protein TERM 1239 1532057 - 1532087 + G 72 -6.8 -4.25104 | gap 1, opp_overlap 1532050 1532047 1532052, overlap 1532058 TTCAATGAGACGCCG TCGTCACGCGCGC GCGAAG GCGCGCC-GACGG TTTTGATACACCCGG RPD_1360 1530263 - 1532374 + | molybdopterin oxidoreductase RPD_1361 1532732 - 1532445 - | hypothetical protein RPD_1362 1533279 - 1533521 + | hypothetical protein RPD_1363 1533550 - 1533813 + | hypothetical protein TERM 1240 1533914 - 1533956 + F 100 -17.2 -5.18726 | opp_overlap 1533910 1533908, overlap 1533915 1533916 TCGATCAGACATGCT CCTGGAGCTTCGGTTCTGAT TGA ATCAGAACTGAAGCTCCAAC TTTTTGTTCTGACGC TERM 1241 1533915 - 1533955 + F 100 -20.7 -3.70512 | opp_overlap 1533910 1533908, overlap 1533914 1533916 CGATCAGACATGCTC CTGGAGCTTCGGTTCTGAT TGA ATCAGAACTGAAGCTCCAA CTTTTTGTTCTGACG TERM 1242 1533916 - 1533954 + F 100 -24.2 -2.81584 | opp_overlap 1533910 1533908, overlap 1533915 1533914 GATCAGACATGCTCC TGGAGCTTCGGTTCTGAT TGA ATCAGAACTGAAGCTCCA ACTTTTTGTTCTGAC RPD_1364 1534130 - 1534762 + | urease accessory protein UreG TERM 1243 1536497 - 1536524 + G 70 -11.2 -3.56643 | overlap 1536499 ATCGCGTTGCGCCGG AAGCGCTCGGCG GCAC CGCCAAGCGCTA TTTCACGGATGTCAG TERM 1244 1536499 - 1536522 + G 77 -13.8 -3.36073 | overlap 1536497 CGCGTTGCGCCGGAA GCGCTCGGCG GCAC CGCCAAGCGC TATTTCACGGATGTC RPD_1365 1534981 - 1536636 + | signal transduction histidine kinase TERM 1245 1536689 - 1536726 + T 74 -10 -3.68827 | opp_overlap 1536689 1536686 1536695 TGTTTCAGACAAGCA GCAATAGCGAAG-CGGCC CGGA GGCCAACTTCGC-ATTGC TTTGCCTGATCCGTG RPD_1366 1537303 - 1536758 - | RNA polymerase sigma factor RPD_1367 1537521 - 1537303 - | hypothetical protein TERM 1246 1537554 - 1537570 + H 74 -5.1 -4.56636 | opp_overlap 1537554 CCCCATGGTCAAGTA CCCTGAA ACT TTGAGGG TTTTGCTTGATTTTT TERM 1247 1537897 - 1537911 + G 72 -8.5 -4.14472 | opp_overlap 1537891 TCGACGAAAGGCATG GGCCG CGCGT CGGCC TTTTCCGCCTGTTCG RPD_1368 1537746 - 1538552 + | two-component response regulator TERM 1248 1538590 - 1538615 + F 100 -23.3 -4.83615 | opp_overlap 1538590 AGCAGGTCGACCGAA GCCGCCCGCGC TAAA GCGCGGGCGGC TTTTTGTCGCGGATG TERM 1249 1538615 - 1538590 - f 100 -23.3 -3.06302 | opp_overlap 1538590 AGCAGGTCGACCGAA GCCGCCCGCGC TAAA GCGCGGGCGGC TTTTTGTCGCGGATG TERM 1250 1538783 - 1538742 - f 100 -16.8 -4.56597 | gap 1, opp_overlap 1538747, overlap 1538745 TGGCCTTGCCAAAAA GA-ACAGGGCGCAGCTG GCATCACCA CAGCTGCGCCCTGTGTC GCCGGTTAATTGGGG TERM 1251 1538779 - 1538745 - f 100 -18.7 -4.40561 | opp_overlap 1538747, overlap 1538742 CCTTGCCAAAAAGAA CAGGGCGCAGCTG GCATCACCA CAGCTGCGCCCTG TGTCGCCGGTTAATT TERM 1252 1538747 - 1538777 + F 79 -15.5 -2.88579 | opp_overlap 1538745 1538742 TTGCCAAAAAGAACA GGGCGCAGCTG GCATCACCA CAGCTGCGCCC TGTGTCGCCGGTTAA RPD_1369 1538973 - 1539383 + | hypothetical protein TERM 1253 1539489 - 1539434 - T 95 -12.6 -4.30576 | opp_overlap 1539444 1539449, overlap 1539444 1539449 GCGTCATGACGAAAA TCCGGCAAGACGAAAGCATCCGCCAA TCGT TTGGCGGATGCTTTCGTTTGAGCGCT GTTTGCCGCCTACGG TERM 1254 1539479 - 1539444 - T 100 -25 -3.06009 | opp_overlap 1539444 1539449, overlap 1539434 1539449 GAAAATCCGGCAAGA CGAAAGCATCCGCCAA TCGT TTGGCGGATGCTTTCG TTTGAGCGCTGTTTG TERM 1255 1539444 - 1539479 + T 100 -25 -3.58329 | opp_overlap 1539434 1539444 1539449, overlap 1539449 GAAAATCCGGCAAGA CGAAAGCATCCGCCAA TCGT TTGGCGGATGCTTTCG TTTGAGCGCTGTTTG TERM 1256 1539449 - 1539474 + T 100 -17.7 -4.06055 | opp_overlap 1539449 1539444 1539434, overlap 1539444 TCCGGCAAGACGAAA GCATCCGCCAA TCGT TTGGCGGATGC TTTCGTTTGAGCGCT TERM 1257 1539474 - 1539449 - T 100 -17.7 -3.92324 | opp_overlap 1539444 1539449, overlap 1539444 1539434 TCCGGCAAGACGAAA GCATCCGCCAA TCGT TTGGCGGATGC TTTCGTTTGAGCGCT RPD_1370 1540762 - 1539659 - | hypothetical protein RPD_1371 1541009 - 1541761 + | ErfK/YbiS/YcfS/YnhG TERM 1258 1542500 - 1542517 + G 71 -9.1 -3.85698 | gap 1, opp_overlap 1542462 1542461 ATTTCTCGCCTGCGC CGGCGTCG ATC CG-CGCCG TTTATGGCAGGGCGC RPD_1372 1541887 - 1542552 + | hypothetical protein RPD_1373 1542680 - 1542835 + | hypothetical protein TERM 1259 1542839 - 1542868 + T 90 -19.5 -2.78384 | overlap 1542826 GCGGTGTTCTAGAGC GTTCCGGTTCTGA TAGA TCAGAACCGGAAC TCTCATACCCAAGGC TERM 1260 1543049 - 1543078 + T 100 -23.7 -3.62046 | opp_overlap 1543049 1543053, overlap 1543053 AGGATGTCTAACGAA GAAAGCCCCGGCG TCAT CGCCGGGGCTTTC TTGTTCAGCGCATCG TERM 1261 1543078 - 1543049 - T 100 -23.7 -3.35073 | opp_overlap 1543049 1543053, overlap 1543053 AGGATGTCTAACGAA GAAAGCCCCGGCG TCAT CGCCGGGGCTTTC TTGTTCAGCGCATCG TERM 1262 1543074 - 1543053 - T 100 -18.7 -4.3255 | opp_overlap 1543049 1543053, overlap 1543049 TGTCTAACGAAGAAA GCCCCGGCG TCAT CGCCGGGGC TTTCTTGTTCAGCGC TERM 1263 1543053 - 1543074 + T 100 -18.7 -4.44667 | opp_overlap 1543053 1543049, overlap 1543049 TGTCTAACGAAGAAA GCCCCGGCG TCAT CGCCGGGGC TTTCTTGTTCAGCGC RPD_1374 1543302 - 1543102 - | CsbD-like TERM 1264 1543450 - 1543415 - R 81 -13.4 -3.6715 | opp_overlap 1543418 1543423, overlap 1543423 TCATTCAATCCCAAA CAAAAAAACCTCCCCC GCGA GGGAGAGGTTTTGTCG TGTGAGGGTCGGCGG TERM 1265 1543442 - 1543423 - R 100 -11.4 -5.95539 | opp_overlap 1543418 1543423, overlap 1543415 TCCCAAACAAAAAAA CCTCCCCC GCGA GGGAGAGG TTTTGTCGTGTGAGG TERM 1266 1543423 - 1543442 + r 91 -9.2 -4.50976 | opp_overlap 1543423 1543415, overlap 1543418 TCCCAAACAAAAAAA CCTCCCCC GCGA GGGAGAGG TTTTGTCGTGTGAGG RPD_1375 1545666 - 1543492 - | malate synthase G TERM 1267 1544085 - 1544119 + g 73 -13.6 -3.28712 | overlap 1544076 1544075 1544044 TGGCGCCGGCCTGCG GATGGCCGATCTTCTG CGC CAGCATGTCGGCCATC TTGTCCGGCGCCGCC TERM 1268 1545705 - 1545688 - R 71 -8.3 -3.85817 | opp_overlap 1545688 1545687 ATGTCTCGCGAGAAA GGGCGCC AAGG GGCGGCC GTTTCAGGGGTCAAA RPD_1376 1546677 - 1545814 - | Sulfate ABC transporter, permease protein CysW RPD_1377 1547504 - 1546677 - | Sulfate ABC transporter, permease protein CysT TERM 1269 1547608 - 1547560 - R 83 -12.4 -3.97308 | gap 1, opp_overlap 1547558 AGCACAAAACTCAAA TTGTCATTCCGGG-ATGCGCCGC GGCA GCGGCGCAGACCCGGAATCCCGA GATGTTGCAAAGAGA TERM 1270 1547663 - 1547622 - R 72 -12.3 -3.36073 | gap 1, overlap 1547620 1547624 1547626 GAGATGTTGCAAAGA GAGATTCCGGGTTCACGAGC TGC GCTCGTGC-CCCGGAATGAC GAACTCTATTGCAGC TERM 1271 1547661 - 1547624 - R 76 -13.5 -3.24708 | gap 1, overlap 1547622 1547620 1547626 GATGTTGCAAAGAGA GATTCCGGGTTCACGAGC TGC GCTCGTGC-CCCGGAATG ACGAACTCTATTGCA TERM 1272 1547659 - 1547626 - R 86 -16.1 -3.18571 | gap 1, overlap 1547624 1547622 1547620 TGTTGCAAAGAGAGA TTCCGGGTTCACGAGC TGC GCTCGTGC-CCCGGAA TGACGAACTCTATTG RPD_1378 1548695 - 1547688 - | thiosulphate-binding protein RPD_1379 1549046 - 1550482 + | uroporphyrin-III C-methyltransferase RPD_1380 1550479 - 1550793 + | hypothetical protein TERM 1273 1551860 - 1551826 - g 70 -10.7 -3.53091 | overlap 1551827 ACGCTGTCGCTGAAA CCGGTCGGCGGC-CCGC CCG GCGACGCCACCG-CCGA TCAGATGGATGCGAT RPD_1381 1550803 - 1552458 + | nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like TERM 1274 1552508 - 1552462 - g 77 -12.8 -3.62597 | opp_overlap 1552470 1552472 GCCACTCGTTAAGAA CGGCGCGATCGTCGCCGACGAC TTC GTCGCTGTCGCCGACGACGCCG AACTGCCCGCGGGCG RPD_1382 1552445 - 1552954 + | hypothetical protein TERM 1275 1552950 - 1552994 + F 74 -12.9 -3.27476 | opp_overlap 1552959, overlap 1552951 1552954 1552988 ACACCGCGGCGGCTA CCTAGATCAGGATGACGCATC GTC GATTCGTCGTCCTGCTCTGGA TTCCTGATTCAGCGT TERM 1276 1552951 - 1552993 + F 80 -16.4 -2.56164 | opp_overlap 1552959, overlap 1552950 1552954 1552988 CACCGCGGCGGCTAC CTAGATCAGGATGACGCATC GTC GATTCGTCGTCCTGCTCTGG ATTCCTGATTCAGCG TERM 1277 1552954 - 1552990 + F 74 -14.5 -2.58767 | opp_overlap 1552959, overlap 1552951 1552950 1552988 CGCGGCGGCTACCTA GATCAGGATGACGCATC GTC GATTCGTCGTCCTGCTC TGGATTCCTGATTCA TERM 1278 1553102 - 1553075 - f 71 -8.3 -3.83323 | opp_overlap 1553077, overlap 1553076 CCGATACAATCCAAA GCGCCGGCTCG TCTTTG CGAGCAGGCGA GGCCGACGACGCAAT RPD_1383 1553187 - 1554122 + | glutaminase TERM 1279 1554182 - 1554149 - T 76 -9.5 -4.08767 | overlap 1554153 GGGACGGGGGCAAAA CAAAGGGCCGAAACG CTCG CACGCCGGCCCTTCG TCAGGTTTCGAAATT TERM 1280 1554178 - 1554153 - T 78 -6.7 -4.64861 | overlap 1554149 CGGGGGCAAAACAAA GGGCCGAAACG CTCG CACGCCGGCCC TTCGTCAGGTTTCGA RPD_1384 1554445 - 1554227 - | hypothetical protein TERM 1281 1554672 - 1554690 + H 70 -7.4 -4.03234 | CGCGATCCGTTCGAA TCCGGAGA GAT TCTCGGGA TTTCTGTGCCCGCCA RPD_1385 1554880 - 1555938 + | glutamate--ammonia ligase TERM 1282 1555957 - 1555922 - f 79 -9 -4.11216 | gap 1, opp_overlap 1555955 TTCCCACCTCTAAAA TTGCGGTCGCCGCCTGA GCC TCCA-CGGCGACTGCAA ACGCGGCCCGGACGC TERM 1283 1555955 - 1555990 + F 85 -14.6 -3.58269 | opp_overlap 1555922 1555959 1555960, overlap 1555960 1555989 CCTCCACGGCGACTG CAAACGCGGCCCGGAC GCAA GTCCGGGCCGCTGTCG TTTCGGGGTAGCTTA TERM 1284 1555986 - 1555959 - f 100 -18.4 -3.60296 | opp_overlap 1555955 1555960, overlap 1555960 CACGGCGACTGCAAA CGCGGCCCGGAC GCAA GTCCGGGCCGCT GTCGTTTCGGGGTAG TERM 1285 1555960 - 1555985 + F 100 -21.9 -3.01001 | opp_overlap 1555959 1555960, overlap 1555955 ACGGCGACTGCAAAC GCGGCCCGGAC GCAA GTCCGGGCCGC TGTCGTTTCGGGGTA TERM 1286 1555985 - 1555960 - f 100 -21.9 -2.75963 | opp_overlap 1555960 1555955, overlap 1555959 ACGGCGACTGCAAAC GCGGCCCGGAC GCAA GTCCGGGCCGC TGTCGTTTCGGGGTA RPD_1386 1556115 - 1556627 + | Allergen V5/Tpx-1 related TERM 1287 1556633 - 1556661 + F 86 -11.9 -4.15044 | GCCGCGCTAGAGCTT TTTTGGTTCTGAT AGA ATCAGAACCGGAA TTTCTTCACACGAAC RPD_1388 1556963 - 1557751 + | 3-hydroxybutyrate dehydrogenase TERM 1288 1557751 - 1557798 + T 74 -13.5 -2.88249 | CTGGACCGCGGCGTA GCGCAAGCGGC-GCTGTCGTCCT TACG GGGACGACAGCGGCCG-TCGCGA TGTATGCCGGATGTG RPD_1389 1558062 - 1557772 - | plasmid stabilization system protein TERM 1289 1557887 - 1557852 - G 71 -2.7 -4.57474 | gap 2 GCAACCGATAGAAAA TCCGAAACGGGTAGC GAATCACG GCTA-CCGTC-CGGA CATTGGATCGTTGTG RPD_1390 1558289 - 1558059 - | hypothetical protein RPD_1391 1559711 - 1558341 - | polysaccharide biosynthesis protein RPD_1392 1559772 - 1560191 + | hypothetical protein RPD_1393 1560386 - 1560934 + | methyl-accepting chemotaxis sensory transducer TERM 1290 1560952 - 1561008 + GF 100 -22.9 -3.02144 | overlap 1560932 1560986 CGGCCGTCTGTCTCG GCGGCGTGGTCGTCTCCACGCTGACGG CGT CCGTCGGCGTGCTGACCGGCGCGCCGC TGTTGCAGCAGATCG RPD_1394 1560900 - 1562234 + | chemotaxis sensory transducer RPD_1395 1562405 - 1562704 + | hypothetical protein TERM 1291 1562730 - 1562747 + T 79 -14.1 -3.50853 | opp_overlap 1562718, overlap 1562741 ACATCGGACGGATCG CGGGGCC TTCG GGCCCCG TTGTCGTTCAAGGCG RPD_1396 1563253 - 1562771 - | YbaK/prolyl-tRNA synthetase associated region RPD_1397 1564234 - 1563365 - | amidohydrolase 2 TERM 1292 1564471 - 1564455 - H 74 -9.3 -3.85698 | opp_overlap 1564459, overlap 1564459 TCCCCTCGTTAGAAA CCGACCG TCC CGGGCGG AGTGCCGCCGGCGGG rpmJ 1564550 - 1564675 + | 50S ribosomal protein L36 TERM 1293 1564777 - 1564804 + F 91 -17.8 -3.13475 | gap 1, overlap 1564765 1564764 1564779 ATCACGCCTGTGTGA CG-CACGCGCTGC TTT GCAGCGCGTGTCG TTGCGTCTAGACTTC TERM 1294 1564779 - 1564801 + F 87 -19.2 -2.77182 | overlap 1564765 1564764 1564777 CACGCCTGTGTGACG CACGCGCTGC TTT GCAGCGCGTG TCGTTGCGTCTAGAC RPD_1399 1564824 - 1565504 + | tetratricopeptide TPR_2 RPD_1400 1565575 - 1566537 + | alpha/beta hydrolase fold TERM 1295 1566966 - 1566940 - g 83 -8.6 -4.58395 | opp_overlap 1566940, overlap 1566919 1566943 GTCACGCTCGAAAAA CAGGGCGACGGC TTC GCCATCACCGCG GTTCATCTTACGCTG RPD_1401 1566679 - 1567107 + | OsmC-like protein TERM 1296 1567127 - 1567161 + T 70 -12.9 -2.87132 | opp_overlap 1567127 CGAATTAGAGACGAA GCATGAGCTCACGAG CGCAA CTCGCGACCTCATGC TCTCTGCGCAACCAG TERM 1297 1567161 - 1567127 - T 84 -15.8 -3.35278 | opp_overlap 1567127 CGAATTAGAGACGAA GCATGAGCTCACGAGC GCA ACTCGCGACCTCATGC TCTCTGCGCAACCAG TERM 1298 1567471 - 1567427 - T 86 -6.6 -5.06414 | gap 2, opp_overlap 1567428 1567431, overlap 1567431 GCGTCGGAACAAAAA GCTAGAGCTCCGCTCTGATTCT ATC AGAACC-G-GAAAAGCTCTAGC CTCACACATCCGTAT RPD_1402 1568906 - 1567473 - | pyruvate kinase RPD_1403 1569493 - 1568903 - | hypothetical protein TERM 1299 1568972 - 1569023 + g 80 -15 -3.44362 | gap 1, overlap 1568996 1569015 GCCCGGCGTCGGCGG GATGCCCGG-CATCCCGGCGCCTGG CGG CGAGCCGCCGGGAAGTCCCGGCAGC TTCTGGGTGTTCTGT TERM 1300 1569433 - 1569378 - G 72 -11.8 -3.59262 | overlap 1569419 TTGCACAGCCGGAAA TCCGCCGCCGCCGGCGCCACG-GCCA GCACCA CGGCGCAAAGCGCCAGCG-CGGCCGA CAGGGCGACCTGGAT RPD_1404 1569709 - 1570002 + | hypothetical protein TERM 1301 1570293 - 1570281 - g 79 -4.1 -4.89477 | GCTGGAAGAAGAAAA GAAGA CGA TCTCC GACGACATCCGCGAC RPD_1405 1570177 - 1570449 + | hypothetical protein RPD_1406 1572501 - 1570732 - | hypothetical protein TERM 1302 1572567 - 1572588 + r 88 -14.5 -3.77832 | opp_overlap 1572567, overlap 1572555 AATGGTTAATGGAAA CGGCTCATC CGGA GATGAGCCG TTGTTCCATTTCAGC TERM 1303 1572588 - 1572567 - R 88 -14.5 -3.75897 | opp_overlap 1572567 1572555 AATGGTTAATGGAAA CGGCTCATC CGGA GATGAGCCG TTGTTCCATTTCAGC RPD_1407 1574780 - 1572630 - | peptidoglycan binding domain-containing protein TERM 1304 1574476 - 1574513 + g 72 -14.1 -3.05384 | gap 1, overlap 1574480 1574481 GCCGTTTCCGGCGCC GCTGCGGTCGGCGCAGGC GCA GCCTGTGCGGGC-GCGGC TTGCGTGGGCGCGGC RPD_1408 1576643 - 1575141 - | two component, sigma54 specific, transcriptional regulator, Fis family TERM 1305 1575670 - 1575655 - G 76 -6 -4.47328 | opp_overlap 1575655, overlap 1575656 AACCGCACCAGAAAA TGCCGC AGCA GCGGCG GGATGTCCTCGCGCC RPD_1409 1577367 - 1576705 - | integral membrane protein TerC RPD_1410 1577794 - 1577489 - | hypothetical protein TERM 1306 1579473 - 1579443 - g 72 -13.2 -3.19602 | overlap 1579441 1579444 TGGCGCAGACCAAGA GCGCCAAGCAGCGC CAG GCGCTGCTCGCCGG CAAGGTCGAGGACAT TERM 1307 1579472 - 1579444 - g 77 -16.7 -2.51547 | overlap 1579443 1579441 GGCGCAGACCAAGAG CGCCAAGCAGCGC CAG GCGCTGCTCGCCG GCAAGGTCGAGGACA RPD_1411 1578029 - 1579927 + | peptidase M3B, oligoendopeptidase-like clade 3 TERM 1308 1580004 - 1579965 - f 100 -19.6 -3.65991 | opp_overlap 1579968, overlap 1579952 1579951 1579968 ATTTGTTGAACACAA CAACATCCTCCGTTATAC ATTT GTATAATGGAGGATGTTG TCCATGAACGAAGCA TERM 1309 1580001 - 1579968 - f 95 -15.5 -3.9644 | opp_overlap 1579968, overlap 1579965 TGTTGAACACAACAA CATCCTCCGTTATAC ATTT GTATAATGGAGGATG TTGTCCATGAACGAA TERM 1310 1579968 - 1580001 + F 93 -17.7 -3.35679 | opp_overlap 1579968 1579965 TGTTGAACACAACAA CATCCTCCGTTATAC ATTT GTATAATGGAGGATG TTGTCCATGAACGAA RPD_1412 1580008 - 1580268 + | SpoVT/AbrB-like RPD_1413 1580265 - 1580657 + | death-on-curing protein RPD_1414 1580956 - 1581147 + | aa3 type cytochrome c oxidase subunit IV RPD_1415 1581226 - 1582350 + | NAD(P)(+) transhydrogenase (AB-specific) RPD_1416 1582363 - 1582686 + | nicotinamide nucleotide transhydrogenase, subunit alpha2 RPD_1417 1582700 - 1584103 + | NAD(P) transhydrogenase, beta subunit TERM 1311 1584121 - 1584155 + T 100 -20.9 -4.07687 | gap 1, opp_overlap 1584128, overlap 1584128 CTCCGACGTCTCGAA CGACAAACGCCCGGCC GAAA GGCCGGGCGTTT-TCG TTTTGAGGCCAAACT TERM 1312 1584149 - 1584128 - T 100 -18.7 -4.05446 | opp_overlap 1584121 1584128 GTCTCGAACGACAAA CGCCCGGCC GAAA GGCCGGGCG TTTTCGTTTTGAGGC TERM 1313 1584128 - 1584149 + T 100 -18.7 -4.67038 | opp_overlap 1584128, overlap 1584121 GTCTCGAACGACAAA CGCCCGGCC GAAA GGCCGGGCG TTTTCGTTTTGAGGC RPD_1418 1584704 - 1584183 - | hypothetical protein TERM 1314 1584789 - 1584757 - R 91 -19.2 -2.87931 | opp_overlap 1584755 1584754 1584750 TTTACCTCCGACAGA CCTTCATGCCCGGC GTAAG GCCGGGCATGACGG AGGTTGTTGTCAGCC RPD_1419 1585179 - 1584805 - | glyoxalase/bleomycin resistance protein/dioxygenase RPD_1420 1585398 - 1585685 + | cupin 2, barrel TERM 1315 1585720 - 1585739 + F 83 -12.1 -4.06781 | opp_overlap 1585698 GACCAGCTTCCCCGA GGGCGCG CCGCGA CGCGCCC TTTCTACGTTTTGAT TERM 1316 1586208 - 1586171 - g 87 -14.7 -3.85698 | GCTGCTGCCGAGAAA GCCACGGCCGACAAGGC TGTT GCGAAGCCGGCCGTGGC CACGGTGGCGTCCGA RPD_1421 1585832 - 1586707 + | hypothetical protein TERM 1317 1586733 - 1586753 + T 100 -13.9 -5.40072 | overlap 1586734 CGATTCTGCCGATCG AGCCCGGGC TTC GCCCGGGCA TTTTTTTAACCGCAG TERM 1318 1586734 - 1586752 + T 100 -17.4 -3.83561 | overlap 1586733 GATTCTGCCGATCGA GCCCGGGC TTC GCCCGGGC ATTTTTTTAACCGCA TERM 1319 1586838 - 1586856 + T 77 -13.1 -3.54424 | opp_overlap 1586838 1586832 GGCTGAAACGCAAAA CGCGGGC ACAGG GCCCGCG TTTCGAAAACTACAA TERM 1320 1586856 - 1586838 - T 95 -13.1 -4.35524 | opp_overlap 1586838, overlap 1586832 GGCTGAAACGCAAAA CGCGGGC ACAGG GCCCGCG TTTCGAAAACTACAA rpsU 1587189 - 1586887 - | 30S ribosomal protein S21 TERM 1321 1587271 - 1587248 - R 76 -5.8 -4.59853 | overlap 1587262 TGAATTTCTGAAAAA GGCGGAGCCG ACAA CGGCCAGGCC CTCAGCCTTAAGGGC RPD_1423 1588479 - 1587385 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 1322 1587796 - 1587835 + g 72 -7.3 -4.1899 | gap 3, overlap 1587798 ATCGGTCACCGGCGC CG-GCACCCGCGA-CACTTT CAG AATGTGATCGCG-GTGCTCG TTTTCGGTGACGTCG TERM 1323 1588467 - 1588513 + g 73 -3.5 -4.67607 | opp_overlap 1588463 1588467 TGAGCACCAACTGAA CGGGAGCCGTC-ACGCCGCGCCC TCC GGCCG-GGCGGCGATCGCATCCG TTTGTTTCTTGCGCC RPD_1424 1588940 - 1588476 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit RPD_1425 1589105 - 1589848 + | GGDEF domain-containing protein RPD_1426 1590044 - 1589838 - | hypothetical protein TERM 1324 1589889 - 1589907 + g 79 -6.7 -4.57569 | gap 1, opp_overlap 1589882 1589877 GAAGGAGATGCGGTC GCGC-AGC GCCA GCTTGCGC TTTTTCAGCCGCTGC TERM 1325 1590003 - 1590026 + g 73 -12.4 -3.39717 | overlap 1590004 TTCCTGCTGCAATTT CGCGAGCTCG GCAT CGAGCTCGCC TTCGTCTTCATCGGT TERM 1326 1590004 - 1590025 + g 74 -15.9 -2.63348 | overlap 1590003 TCCTGCTGCAATTTC GCGAGCTCG GCAT CGAGCTCGC CTTCGTCTTCATCGG RPD_1427 1590427 - 1590609 + | hypothetical protein RPD_1428 1592076 - 1590970 - | FAD dependent oxidoreductase TERM 1327 1591617 - 1591577 - G 77 -13.2 -3.53091 | overlap 1591582 AGCGGCGCGTGGAAA GCG-AACGCGGCGCCGGCCG CCT CGG-CGTCGCCGCGCAGCGC CAGCATATAGGAATG TERM 1328 1591611 - 1591582 - G 86 -17.1 -3.27525 | gap 1, overlap 1591577 CGCGTGGAAAGCGAA CGCGGCGCCGGCCG CCT CGG-CGTCGCCGCG CAGCGCCAGCATATA TERM 1329 1593501 - 1593489 - g 79 -4.7 -4.78107 | opp_overlap 1593489 CATCAGCACCAAAAA CGGCC TTC GGCTG TTCGTGACCCGCCGC RPD_1429 1592248 - 1594932 + | GGDEF domain-containing protein TERM 1330 1594933 - 1594947 + F 74 -12.8 -3.28712 | CTGCAGGTCGGCTGA CGCGCG CAT CGCGCG TTATGCACAGGGCGA TERM 1331 1595100 - 1595064 - g 83 -15.7 -3.58533 | opp_overlap 1595066 CGAGAACGTTGCAAA GCGCAGCGCACCCGCTG ATG CCTCGGGTGCGCCGCTC CTTCAAATCGAAGCG TERM 1332 1595066 - 1595098 + G 72 -14.7 -2.73364 | opp_overlap 1595064 AGAACGTTGCAAAGC GCAGCGCACCCGCTG ATG CCTCGGGTGCGCCGC TCCTTCAAATCGAAG RPD_1430 1595044 - 1596192 + | spermidine/putrescine ABC transporter ATP-binding subunit TERM 1333 1596540 - 1596561 + G 78 -13.7 -3.58522 | CTTACGCAATGGCGC GGCTGCCGC GAGG GTGGCAGCC TTTGGCGATGATGCT TERM 1334 1596801 - 1596847 + G 73 -12.1 -3.37796 | gap 1, opp_overlap 1596790 1596791, overlap 1596832 1596837 CAAAGCTGCCGCACG CGCTCGGCGAGGC-CGCGGCCG ATCT CGGTTGCTCGCCGCGCCAGGCG TTCTGGCTGGTGACG RPD_1431 1596203 - 1597117 + | binding-protein-dependent transport systems inner membrane component RPD_1432 1597117 - 1597932 + | binding-protein-dependent transport systems inner membrane component RPD_1433 1600067 - 1598100 - | AsmA TERM 1335 1600598 - 1600613 + G 72 -11.8 -3.61398 | CATCCGCGCCGGCGG CGCCGG CATT CCGGCG TTCTTCACCAAGACC RPD_1434 1600263 - 1600979 + | 3-oxoacid CoA-transferase, subunit A RPD_1435 1600991 - 1601641 + | 3-oxoacid CoA-transferase, subunit B TERM 1336 1601779 - 1601760 - f 85 -15 -3.55761 | GACCCATTCTTCAAA GCTCGCCC AAGA GGGCGAGC ACTCCAGCATCACGG TERM 1337 1601867 - 1601837 - f 76 -11.1 -3.72576 | gap 1, overlap 1601804 1601838 TTGTGTCGCACGAAA CGTCGCGCATCGCG TCGG CGCGACGCG-GCCG CGTCATGAGCGCAAT TERM 1338 1603365 - 1603343 - g 81 -14.8 -3.61398 | GCTGTTGTGCAACAA CGCCGGCCTG CGC CAGGTCGGCG CCGACTGGGTCGTCG RPD_1436 1602123 - 1604852 + | ATPase, E1-E2 type RPD_1437 1605544 - 1604891 - | hypothetical protein RPD_1438 1607341 - 1605695 - | binding-protein-dependent transport systems inner membrane component RPD_1439 1608601 - 1607588 - | extracellular solute-binding protein RPD_1440 1609048 - 1608815 - | hypothetical protein RPD_1441 1610836 - 1609214 - | beta-lactamase-like RPD_1442 1611747 - 1610833 - | phosphoribosylpyrophosphate synthetase RPD_1443 1613288 - 1611744 - | thymidine phosphorylase TERM 1339 1612169 - 1612187 + g 74 -5.8 -4.57073 | opp_overlap 1612168, overlap 1612170 CGTATTCGAGCAGAT GCGCGGCG AGC CGCAGCGA TTTTTCGCGCAGATC RPD_1444 1614164 - 1613454 - | Crp/Fnr family transcriptional regulator RPD_1445 1614659 - 1614258 - | PilT protein-like RPD_1446 1614907 - 1614656 - | Rv0623-like transcription factor RPD_1447 1618741 - 1615136 - | histidine kinase A-like RPD_1448 1619087 - 1619470 + | phasin 2 TERM 1340 1619622 - 1619655 + F 75 -3 -4.8622 | opp_overlap 1619609 1619607 1619639, overlap 1619624 TAGGGATGATCAGCG TTGGTCGTCCCCAA ACAGGC TCGGCGACGGCCCA TTTTTCCTTAGGCCA RPD_1449 1619716 - 1620147 + | phasin 2 TERM 1341 1620176 - 1620195 + F 100 -12.1 -5.28176 | opp_overlap 1620176 CGCACGATTTCGAAA GCCCGGG CATTGT CCCGGGC TTTTTTGTCGATAGC TERM 1342 1620195 - 1620176 - f 75 -12.1 -3.58343 | opp_overlap 1620176 CGCACGATTTCGAAA GCCCGGG CATTGT CCCGGGC TTTTTTGTCGATAGC TERM 1343 1620854 - 1620832 - f 91 -17.8 -3.17075 | overlap 1620817 GCGGTTCCAACGCAA CAGCGCGTCA GAC TGACGCGCTG GCGCCGCGCCGATGC RPD_1450 1620888 - 1621277 + | hypothetical protein RPD_1451 1621426 - 1622106 + | cobyrinic acid a,c-diamide synthase TERM 1344 1622122 - 1622139 + T 90 -14.1 -3.98282 | opp_overlap 1622121 1622120 1622118 1622116 ACTTCACAACACATG CGCGCGG AATT CCGCGCG TTTCGTTGCTGTCGC TERM 1345 1622263 - 1622243 - T 100 -14 -5.88471 | TATGACGAAAAAAAA CCGGGCTC GCGAG GAGCCCGG CTGAGGTCTTGGCCA RPD_1452 1623337 - 1622444 - | LysR family transcriptional regulator RPD_1453 1624335 - 1623370 - | thioredoxin reductase RPD_1454 1624587 - 1625069 + | AsnC family transcriptional regulator RPD_1455 1625500 - 1625090 - | DoxX TERM 1346 1625661 - 1625629 - R 100 -22.2 -3.87815 | opp_overlap 1625633 1625636, overlap 1625633 CCGCACCGCGACAAA CAAACAAGCCGCGC ACGAG GCGCGGCTTGTTTG GCATTGATGCGGCCG TERM 1347 1625633 - 1625657 + r 100 -17.2 -3.67976 | opp_overlap 1625629 1625633, overlap 1625636 ACCGCGACAAACAAA CAAGCCGCGC ACGAG GCGCGGCTTG TTTGGCATTGATGCG TERM 1348 1625657 - 1625633 - R 100 -17.2 -4.55697 | opp_overlap 1625633 1625636, overlap 1625629 ACCGCGACAAACAAA CAAGCCGCGC ACGAG GCGCGGCTTG TTTGGCATTGATGCG TERM 1349 1625636 - 1625654 + r 86 -13.1 -3.97019 | opp_overlap 1625633 1625629, overlap 1625633 GCGACAAACAAACAA GCCGCGC ACGAG GCGCGGC TTGTTTGGCATTGAT greA 1626282 - 1625785 - | transcription elongation factor GreA TERM 1350 1625826 - 1625861 + g 81 -11 -4.11216 | CGTAGGCCTTGGCGC CGCCGGGCGCGACG ACTTCCAC CGACGTGCCCTGCG TTTTGCCGATCAGGG carB 1629820 - 1626491 - | carbamoyl phosphate synthase large subunit TERM 1351 1629880 - 1629861 - H 100 -10.6 -5.60993 | opp_overlap 1629861 1629860 1629858 TCGGGCACAAAAAAA GGGCGCGC ATCC GCGCGTCC CCTGTTCTACAAGCG TERM 1352 1630331 - 1630355 + G 77 -7.8 -4.37092 | gap 1, overlap 1630349 AGCCGTCTTTCACGC CCAGCCGCCGC TCTG GCCGCG-CTGG TTTTGTCCGCCGCCT RPD_1458 1630304 - 1631014 + | methionine sulfoxide reductase A TERM 1353 1631088 - 1631062 - g 72 -5.1 -4.3586 | gap 1, overlap 1631065 TGACCGATACCAAAA CGACGCCTGGCA AGGT TGCCAAGAG-CG AGGCCGAGTGGCGCA RPD_1459 1631046 - 1631459 + | methionine sulfoxide reductase B RPD_1460 1631588 - 1631752 + | hypothetical protein RPD_1461 1631940 - 1632218 + | hypothetical protein RPD_1462 1632621 - 1632250 - | hypothetical protein TERM 1354 1632879 - 1632909 + G 71 -9.6 -3.76125 | TGACCCTTGTGTCAG TCGGCCTCTGCGGC TGT GCCGTGGACGCCAA TTTCAGTTACGCTCC TERM 1355 1632946 - 1632988 + G 87 -14.8 -3.85698 | gap 1, opp_overlap 1632937 1632940 1632956 CATGAAGCAGGCGGG GCCG-CGACAACCGGTGGC CGAGAC GCCGCCGGACGTCGGCGGC TTTCTGAGGACCAAC RPD_1463 1632836 - 1633237 + | hypothetical protein RPD_1464 1634966 - 1633440 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit RPD_1465 1635786 - 1635067 - | transglutaminase-like RPD_1466 1636030 - 1635803 - | hypothetical protein RPD_1467 1636412 - 1636134 - | hypothetical protein TERM 1356 1636256 - 1636230 - G 77 -12.2 -3.68302 | opp_overlap 1636230 1636229, overlap 1636221 GTAATAGGCGAACAA TTCGTCCGGCCG GAT CGGCGGGCCGAA ATTGTGGATGTACAG RPD_1468 1637508 - 1636486 - | alpha/beta hydrolase fold TERM 1357 1637413 - 1637395 - G 78 -16 -3.14132 | opp_overlap 1637374 GCTCGCGTTGACGAA CACGCCGC GCG GCGGCGTG CGCGCCTCGAGCGTC RPD_1469 1637656 - 1638921 + | secretion protein HlyD TERM 1358 1639792 - 1639818 + G 73 -10.8 -3.68351 | TCGGCCTGTCGGTGG CGTTCGGCATCG CGG CGGTGCTGATCG TTTCGGTGATCCAGC RPD_1470 1638930 - 1640144 + | hypothetical protein RPD_1471 1640137 - 1640835 + | ABC transporter related RPD_1472 1641575 - 1641201 - | hypothetical protein RPD_1473 1642880 - 1641660 - | putative urea/short-chain binding protein of ABC transporter TERM 1359 1642143 - 1642167 + g 70 -2 -4.58308 | gap 1, opp_overlap 1642148, overlap 1642145 CTGTTGTCCGCCCTT GA-AGACGCCG AACT CGGCGCCGGTC TTTATTTCATTGATG RPD_1474 1642919 - 1643260 + | hypothetical protein RPD_1475 1643257 - 1644054 + | enoyl-CoA hydratase RPD_1477 1645962 - 1644739 - | GGDEF domain-containing protein RPD_1476 1644056 - 1644808 + | hypothetical protein RPD_1478 1646314 - 1646682 + | putative 6-pyruvoyl tetrahydropterin synthase RPD_1479 1647334 - 1646741 - | hemerythrin HHE cation binding region RPD_1480 1649904 - 1647469 - | heavy metal translocating P-type ATPase TERM 1360 1647916 - 1647943 + g 86 -17 -3.30124 | GGCGATGCCGAGTTT CCGCGCGATGGC GTTC GCCGTCGTGCGG TTGTCGCCGGTCAGC TERM 1361 1648197 - 1648247 + g 72 -13.2 -3.08015 | overlap 1648182 1648180 CTGCGACCTTGCCGG TCGCGCCTTTGCCGGTCGGGGCAT CGA ATGCTTCGACCGGAACGAGCTCGA TGTTGCGATCCTTGG RPD_1481 1649958 - 1650233 + | hypothetical protein RPD_1482 1650938 - 1650282 - | hypothetical protein RPD_1483 1651828 - 1651286 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1362 1651516 - 1651553 + g 75 -9.1 -4.11216 | overlap 1651498 1651518 CGTCGAGGCCGTTGG CCTCGGCACGCTGCT TCGCGCTC AGCAGCGCGTCGATG TTTTCGACCTGGAAC TERM 1363 1651518 - 1651551 + g 70 -10.3 -3.65542 | overlap 1651498 1651516 TCGAGGCCGTTGGCC TCGGCACGCTGCT TCGCGCTC AGCAGCGCGTCGA TGTTTTCGACCTGGA RPD_1484 1652290 - 1651988 - | hypothetical protein TERM 1364 1652511 - 1652482 - R 100 -19.3 -4.72986 | overlap 1652483 GACCTGGATCAAAAA TGGCAACGCGCGC CGAA GCGCGCGTTGCCG AACAAAACGGGCAGT TERM 1365 1652510 - 1652483 - R 100 -22.8 -3.4331 | overlap 1652482 ACCTGGATCAAAAAT GGCAACGCGCGC CGAA GCGCGCGTTGCC GAACAAAACGGGCAG RPD_1485 1653879 - 1652530 - | coproporphyrinogen III oxidase RPD_1486 1654617 - 1653907 - | bacteriochlorophyll 4-vinyl reductase TERM 1366 1654385 - 1654363 - GR 71 -14.1 -2.57132 | overlap 1654362 GGCGTCGTCGAGAAT CGCCGCCGC CTGCT GCGGCGGCA GCAGTCTGCGGACCG TERM 1367 1654527 - 1654486 - GR 77 -13.6 -3.28791 | gap 1, overlap 1654488 1654489 AGCCGCCTCCGAGAA GATCTCGCTCGCGGCCGGC TGAAG GCCGGCCGCGT-CGAGGGC GGTGATCAACTGCGT TERM 1368 1654525 - 1654488 - GR 80 -14.8 -3.21276 | gap 1, overlap 1654486 1654489 CCGCCTCCGAGAAGA TCTCGCTCGCGGCCGGC TGAAG GCCGGCCGCGT-CGAGG GCGGTGATCAACTGC TERM 1369 1654524 - 1654489 - GR 86 -18.3 -2.52623 | gap 1, overlap 1654488 1654486 CGCCTCCGAGAAGAT CTCGCTCGCGGCCGGC TGAAG GCCGGCCGCGT-CGAG GGCGGTGATCAACTG RPD_1487 1656292 - 1654589 - | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 1370 1655284 - 1655294 + gr 95 -8.2 -5.18726 | overlap 1655263 CGGCTTCGCGCAGCA GGCG GAT CGCC TTTTTATTGTCGGAG RPD_1488 1656881 - 1656450 - | hypothetical protein TERM 1371 1657124 - 1657136 + G 74 -2.6 -4.74801 | overlap 1657106 AGCGGGAGGTCGGAC GTGC TGCTT GCGC TTTTTGCTGACATTC RPD_1489 1657124 - 1657864 + | metallophosphoesterase TERM 1372 1658105 - 1658117 + G 72 -4.8 -4.56597 | ATGTCCCCCGATTCG TCGG ACTCG CCGA TTTTTCGACGCAGCC TERM 1373 1658828 - 1658775 - g 78 -13.7 -3.61398 | gap 1, overlap 1658799 CCGCCGCTTCAACAA GGAGCTGACGCG-GTCGCGCAAGGAG ACG CTCGCGGCGCACCTCGCGTCGGCCCC GATCGTCGCGGTCGC RPD_1490 1657870 - 1659309 + | serine/threonine protein kinase RPD_1491 1660030 - 1659380 - | transport-associated TERM 1374 1660247 - 1660272 + H 74 -9.8 -3.70149 | overlap 1660250 CGTTCGCGAGCGACT CGAGTGTCAG GATTTG CTGACACTTG TTTCGATCCTGTCGA TERM 1375 1660250 - 1660269 + H 70 -7.9 -3.98075 | overlap 1660247 TCGCGAGCGACTCGA GTGTCAG GATTTG CTGACAC TTGTTTCGATCCTGT TERM 1376 1661828 - 1661838 + G 76 -2.4 -4.93296 | GCTATCTGCTGACCG GACG TCA CGGC TTTTTCTCGTGCTAC RPD_1492 1660408 - 1662762 + | putative phosphoketolase TERM 1377 1662849 - 1662829 - f 74 -14.7 -2.61216 | overlap 1662826 1662825 GCATCAACCAATCGA GCAGCCGCG TTA CGCGACTGC CGCGTTGCCGTCTCC RPD_1493 1662935 - 1663435 + | response regulator receiver RPD_1494 1664085 - 1664963 + | protein-glutamate O-methyltransferase RPD_1495 1664976 - 1665296 + | hypothetical protein RPD_1496 1665443 - 1666684 + | response regulator and cylclic diguanylate phosphodiesterase RPD_1497 1669377 - 1666735 - | multi-sensor hybrid histidine kinase RPD_1498 1670429 - 1669374 - | hypothetical protein TERM 1378 1670665 - 1670679 + H 70 -12.8 -2.96274 | opp_overlap 1670664 1670661, overlap 1670662 1670678 TATTCGTAAAACTAC GGGCCG GGG CGGCCC TGTCATTGTCGCAGG TERM 1379 1671294 - 1671282 - g 79 -4.7 -4.8083 | opp_overlap 1671286 CAACATCATGAAAAA GCTCG GCG CGCGC AATGCGACGGACCTC RPD_1499 1670713 - 1671342 + | LuxR family two component transcriptional regulator RPD_1500 1672144 - 1671362 - | short-chain dehydrogenase/reductase SDR RPD_1501 1672261 - 1673022 + | short-chain dehydrogenase/reductase SDR TERM 1380 1673133 - 1673095 - T 93 -19.6 -3.08133 | overlap 1673119 CACGCAGTGAGCGAA CCCGGAATCCCGCAGTTC AGA GCACCTCGGGATTCCGGG TTCGCCGCTGCGCGG RPD_1502 1674783 - 1673176 - | glucose-methanol-choline oxidoreductase TERM 1381 1673469 - 1673504 + g 73 -6.1 -4.36914 | gap 2, overlap 1673471 TCTTCTGCTGCAGCG CG-CGCAAC-GCCGGTG CGTC CACCAGCCGCTGCGTCG TTTTGTAACCGGCGA TERM 1382 1674039 - 1674062 + g 70 -13.1 -3.04443 | overlap 1674044 1674046 ATGCGACGATCACTT CGCGGCGGG CGCGGA CCTGCCGCG TCTCGTTGTTCTGGC RPD_1503 1676292 - 1674859 - | aldehyde dehydrogenase TERM 1383 1676510 - 1676544 + r 73 -7.1 -4.26881 | gap 1, overlap 1676504 1676514 AGGAACCTTCCGGGA G-GATCGATCAGCGCC CAAC GGCGTTGACCGTTCAC TTTGGTTTTCTGAAA TERM 1384 1676665 - 1676696 + r 86 -13.1 -4.08216 | gap 1, opp_overlap 1676670, overlap 1676670 AACCAAGTTGACTTG CGAAA-CCCCGGTC CCAGT GGCCGGGGTTTTCG TTTTGAGGGGAATCG TERM 1385 1676690 - 1676670 - R 70 -10.4 -3.55563 | gap 1, opp_overlap 1676665 1676670 AGTTGACTTGCGAAA CCCCGGTCC CAGT GG-CCGGGG TTTTCGTTTTGAGGG TERM 1386 1676670 - 1676690 + r 100 -11.8 -4.67038 | opp_overlap 1676670, overlap 1676665 AGTTGACTTGCGAAA CCCCGGTC CCAGT GGCCGGGG TTTTCGTTTTGAGGG RPD_1504 1677413 - 1676988 - | regulatory protein, MerR RPD_1505 1677478 - 1679628 + | heavy metal translocating P-type ATPase TERM 1387 1680241 - 1680257 + T 71 -5 -4.42464 | overlap 1680243 GCCTCTCTGCTCTTC GCGGCC TTCTC GGCCAC TTTCTTTCGCAGCTT RPD_1506 1680629 - 1680216 - | thioesterase TERM 1388 1682677 - 1682702 + G 77 -11.1 -3.79043 | gap 1 CGTTCTGGGACACGC GTGCGCTGGCCG AGT CGGTC-GCGCGC TTTCCGTTCATGGTC RPD_1507 1681050 - 1683797 + | molybdopterin oxidoreductase RPD_1508 1683794 - 1684447 + | 4Fe-4S ferredoxin, iron-sulfur binding RPD_1509 1684444 - 1685331 + | phenylacetyl-CoA:acceptor oxidoreductase RPD_1510 1685383 - 1685955 + | pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, gamma subunit RPD_1511 1685952 - 1686254 + | pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, delta subunit RPD_1512 1686251 - 1687495 + | pyruvate flavodoxin/ferredoxin oxidoreductase-like RPD_1513 1687506 - 1688753 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPD_1514 1688756 - 1690084 + | thiamine pyrophosphate enzyme-like TPP-binding TERM 1389 1690190 - 1690165 - f 80 -4.7 -4.87665 | gap 1 GCTGAGGCAGAAAAA GTTCACAGCGTC CTC GAGGC-GCGAAC GACAGAACTTCGTAG RPD_1515 1690219 - 1691535 + | phenylacetate-CoA ligase RPD_1516 1691569 - 1692444 + | inner-membrane translocator RPD_1517 1692441 - 1693370 + | inner-membrane translocator RPD_1518 1693370 - 1694131 + | ABC transporter related TERM 1390 1694673 - 1694689 + G 72 -5.7 -4.30576 | overlap 1694675 1694686 CATCGCGCGCGCTTT GATGGGG CGG CCCCGGC TTTTGCTGCTCGACG RPD_1519 1694137 - 1694931 + | ABC transporter related TERM 1391 1695052 - 1695082 + G 80 -14.1 -3.64703 | gap 1, opp_overlap 1695072, overlap 1695056 GCCGTGCAGGCCAAG GCGGCCGAGCCGAT CAAA ATCGGCTCGGT-GC TTTCGGTCACCGGCC TERM 1392 1695056 - 1695079 + G 82 -16.8 -2.94144 | opp_overlap 1695072, overlap 1695052 TGCAGGCCAAGGCGG CCGAGCCGAT CAAA ATCGGCTCGG TGCTTTCGGTCACCG TERM 1393 1695481 - 1695459 - g 77 -11.3 -3.7732 | opp_overlap 1695459 1695457 CGGCGACATGAAGAA GCGCAACCT GACCA AGGTCGCGC TGTTGTCGGAGACCA RPD_1520 1694986 - 1696131 + | extracellular ligand-binding receptor TERM 1394 1696123 - 1696178 + F 79 -11.1 -3.83026 | gap 2, overlap 1696138 GGCGACTGGGTGCTG GTCGATTGACGGCTGGTCGCGTCCGGC GGCG GCCGGACGCGACTT-TCGCCG-TCGCC TTTCGTCTCAGGGGG TERM 1395 1696138 - 1696165 + F 100 -22.8 -3.5764 | overlap 1696123 GTCGATTGACGGCTG GTCGCGTCCGGC GGCG GCCGGACGCGAC TTTCGCCGTCGCCTT RPD_1521 1696295 - 1697233 + | phenylacetic acid degradation operon negative regulatory protein PaaX RPD_1522 1697360 - 1698085 + | cyclic nucleotide-binding RPD_1523 1699109 - 1698123 - | molybdopterin dehydrogenase, FAD-binding RPD_1524 1701442 - 1699106 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding RPD_1525 1701969 - 1701439 - | (2Fe-2S)-binding RPD_1526 1702098 - 1703660 + | benzoate-CoA ligase family TERM 1396 1703930 - 1703942 + G 71 -3.3 -4.58395 | opp_overlap 1703923, overlap 1703930 1703923 GGACAACACCGGGCA TGCGC GCC GCGGA TTTTTCGAGAATCGA RPD_1527 1703826 - 1704782 + | GCN5-related N-acetyltransferase RPD_1528 1704794 - 1705300 + | GCN5-related N-acetyltransferase RPD_1529 1705376 - 1705840 + | hypothetical protein RPD_1530 1706440 - 1705904 - | rubrerythrin RPD_1531 1707276 - 1706437 - | pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, beta subunit RPD_1532 1709006 - 1707273 - | pyruvate flavodoxin/ferredoxin oxidoreductase-like RPD_1533 1709330 - 1709085 - | 4Fe-4S ferredoxin, iron-sulfur binding RPD_1534 1710937 - 1709363 - | benzoate-CoA ligase family TERM 1397 1710768 - 1710796 + g 77 -10.1 -3.97834 | CGCTTCACACCGAGG GCGCGAAGGCTGG CCG CCATCCGCCGCGC TTTGTCGTCGAGTTC TERM 1398 1711052 - 1711070 + r 79 -8.1 -4.25104 | TACGGCTCAGGCCGC GTTCGCC ATGTC GGCGAGC TTTTGGTGGCGGAAC RPD_1535 1711876 - 1711043 - | benzoyl-CoA reductase, subunit D RPD_1536 1713202 - 1711889 - | benzoyl-CoA reductase, subunit A TERM 1399 1712871 - 1712892 + g 72 -7.2 -4.27584 | overlap 1712854 TCTTTCAGCGCGCCG GCGACGGC GGCGAA GCGGTCGC TTTTCAGTTGGCCGT RPD_1537 1714523 - 1713213 - | benzoyl-CoA reductase, subunit B RPD_1538 1715704 - 1714520 - | benzoyl-CoA reductase, subunit C TERM 1400 1715180 - 1715198 + g 80 -16 -3.22223 | opp_overlap 1715140 1715173 GTTGAATACCGCGAT CGAGGCGC GCA GCGCCTCG TTGGTGATCGGCTTG RPD_1539 1716930 - 1715911 - | zinc-binding alcohol dehydrogenase RPD_1540 1717528 - 1717001 - | regulatory protein, MarR RPD_1541 1717662 - 1718429 + | short-chain dehydrogenase/reductase SDR TERM 1401 1718744 - 1718718 - g 73 -14.4 -3.18264 | CTGCCGATGGAGGAA CTGCACACCGCG ATC CGCGATGTGCCG AAGCCGGTGATCGCG RPD_1542 1718457 - 1719239 + | naphthoate synthase TERM 1402 1719286 - 1719261 - f 80 -14.7 -3.12351 | overlap 1719264 GCTCCGGACATCGAA TGACGCCGAGG ACAA CCTCGGCGTCG GCGGGCAGTCAGGGA TERM 1403 1719283 - 1719264 - f 75 -15 -2.77182 | overlap 1719261 CCGGACATCGAATGA CGCCGAGG ACAA CCTCGGCG TCGGCGGGCAGTCAG RPD_1543 1719311 - 1720462 + | acyl-CoA dehydrogenase-like TERM 1404 1720644 - 1720674 + G 73 -11 -3.63627 | opp_overlap 1720632 1720630 AGACCGCCCTGACGG CGGTGCGTCTCGAC CGC GGTGAGCCGCGCCG TTTCAGCTATCGCGA RPD_1544 1720511 - 1722154 + | cyclohexanecarboxylate-CoA ligase RPD_1545 1722244 - 1723020 + | enoyl-CoA hydratase/isomerase RPD_1546 1725428 - 1723107 - | von Willebrand factor, type A TERM 1405 1724874 - 1724847 - G 75 -9 -4.10188 | opp_overlap 1724850 CACATCGACAAACAA GGTGCCGCGGCG CTCG CGCTCCAGCACC GCGCGGCTGTCCTGC TERM 1406 1724922 - 1724907 - G 70 -11.8 -3.36515 | overlap 1724905 TTCCAGCCCGAAATA CGCGGC CTGC GCCGCG AGATTGCGCTGATGC TERM 1407 1725114 - 1725072 - G 73 -14.9 -2.88861 | gap 2, overlap 1725074 CAGCAGTTGCAGATA GACGGCCACCAGTTCCGCATC GCT GAAGCGG--CTGGCGGCCGCC GGCAGGCTGGCGAAG TERM 1408 1725112 - 1725074 - G 72 -13.9 -2.99471 | gap 2, overlap 1725072 GCAGTTGCAGATAGA CGGCCACCAGTTCCGCATC GCT GAAGCGG--CTGGCGGCCG CCGGCAGGCTGGCGA RPD_1547 1726277 - 1725468 - | ATPase TERM 1409 1726349 - 1726397 + r 100 -22.3 -4.34402 | overlap 1726350 1726351 GAGGGCCGCCGGGCG GAGGCCGGGGGCGCGCGACTGCG CTG CGCAGTCATGCGCCCCCGTCCAG TTTTGATGTCAGGGG TERM 1410 1726350 - 1726396 + r 100 -25.8 -3.2032 | overlap 1726349 1726351 AGGGCCGCCGGGCGG AGGCCGGGGGCGCGCGACTGCG CTG CGCAGTCATGCGCCCCCGTCCA GTTTTGATGTCAGGG TERM 1411 1726351 - 1726395 + r 100 -29.3 -2.51871 | overlap 1726350 1726349 GGGCCGCCGGGCGGA GGCCGGGGGCGCGCGACTGCG CTG CGCAGTCATGCGCCCCCGTCC AGTTTTGATGTCAGG RPD_1548 1726791 - 1726429 - | ribulose-bisphosphate carboxylase rbcL 1728250 - 1726832 - | ribulose bisophosphate carboxylase RPD_1550 1728366 - 1729325 + | LysR, substrate-binding TERM 1412 1730958 - 1730985 + G 74 -9.8 -3.78775 | gap 1 TGTTCATCCTGACCA CGGTCGATGCCGG CAC CCG-CGTCGCCCG TTTCATGATCCAGGA TERM 1413 1731323 - 1731303 - g 77 -7.6 -4.36914 | opp_overlap 1731316 CGGGGTTCCAGAAAA TCTTCAGC GCCGA GCCGAAGA TCGGCTTCGTTGCCC RPD_1551 1729496 - 1731586 + | carbon starvation protein CstA TERM 1414 1731625 - 1731655 + G 79 -16.3 -3.05384 | CGGTACGCGCCGCGC GTCTGATGGTCGG CATTC CCGACTATCAGAC TTACGTGGAGCACCG RPD_1552 1731591 - 1731779 + | hypothetical protein RPD_1553 1732547 - 1731843 - | regulatory protein, TetR TERM 1415 1731984 - 1731965 - G 77 -3.6 -4.83169 | opp_overlap 1731979 AGGCCGCTAGAAAAA CATCGA TGGCGCGT TCGATG GCCTGATCGATTTCG TERM 1416 1732748 - 1732769 + H 100 -11.7 -4.62471 | opp_overlap 1732745 1732753 CAAGCTAGAAATCGG CAATACCGT ACGT ACGGTATTG TTTTTAGCCCTTGGA RPD_1554 1732792 - 1733343 + | cytochrome B561 RPD_1555 1733369 - 1734553 + | secretion protein HlyD TERM 1417 1735492 - 1735523 + G 74 -15.2 -3.02144 | gap 1 CGAAGCGGTGATGAC CGAGGTCGACCGAGC GAC GC-CGGTCGGTCTCG TCTTCGAGCGGATGG TERM 1418 1736194 - 1736218 + G 75 -4.9 -4.57569 | overlap 1736196 CGCGCTATCCGTCAT CGGCTTCGGCA AGG TATCGAAGCAG TTTTTCCCGGCGTCG RPD_1556 1734569 - 1737739 + | acriflavin resistance protein RPD_1557 1737828 - 1738055 + | hypothetical protein RPD_1558 1738733 - 1738068 - | response regulator receiver RPD_1559 1740324 - 1738915 - | ATP-binding region, ATPase-like TERM 1419 1739739 - 1739700 - G 79 -13.6 -3.72742 | gap 1, overlap 1739703 CGATCAGGAACAGAA GCA-GCATCATCGGTGCCG TGA CCGCCCCGACGATGCCTGC AGTTACGGTGCGGAT TERM 1420 1739735 - 1739703 - G 72 -14.1 -2.95751 | overlap 1739700 TCAGGAACAGAAGCA GCATCATCGGTGCCG TGA CCGCCCCGACGATGC CTGCAGTTACGGTGC TERM 1421 1739950 - 1739979 + g 79 -7.9 -4.48713 | gap 1, overlap 1739928 1739946 1739951 GAACGCCTTGTCGAG GTGATCGGACGGGA ATT TCTCG-CCGATCAA TTTGTTGTTGGTCGC TERM 1422 1749135 - 1749155 + G 74 -12.6 -3.57144 | opp_overlap 1749146 CTCGTCGGCGGCGCC GGCGACGA CAACA TCGTCGCC TTTGCCGATGACGAC RPD_1560 1740702 - 1749986 + | heme peroxidase TERM 1423 1749981 - 1750038 + F 73 -11.1 -3.54459 | gap 1, overlap 1749989 1750035 TCGTCGAACGTCGGT C-TGTAAGCGGCTTGGTGGCTCGCGGCG TGG CGCCGCGAGCCACCGGGACCTTCCCTCG TTTCAAGCGGGTTGA TERM 1424 1749989 - 1750030 + F 100 -26.7 -3.1634 | gap 1, overlap 1749981 CGTCGGTCTGTAAGC GG-CTTGGTGGCTCGCGGCG TGG CGCCGCGAGCCACCGGGACC TTCCCTCGTTTCAAG TERM 1425 1750383 - 1750353 - g 83 -13.3 -3.78934 | gap 1 GCGGCTCGACAAGAA GATCGCGCCGCTGG CGCA CC-GCGTCGCGATC GACATGCCACGGTTC RPD_1561 1750060 - 1751811 + | Type I secretion system ATPase, PrtD TERM 1426 1752365 - 1752344 - g 70 -10.8 -3.59979 | TCGCGGGAGTGGAAA CGACGGCC CGCTGC GGCCGCCG CCGGAACGTCCTCCT TERM 1427 1753702 - 1753669 - g 71 -14.8 -2.54702 | opp_overlap 1753675, overlap 1753675 AGACAGCGGAAGGCA TCGAAATCGGCAAG GACCTG CTTGCCAATTTCGA ACGGATCATCGGCGG RPD_1562 1751808 - 1754117 + | RTX toxins and related Ca2+-binding proteins-like RPD_1563 1754138 - 1755493 + | Type I secretion membrane fusion protein, HlyD RPD_1564 1756074 - 1755628 - | GtrA-like protein RPD_1565 1757128 - 1756289 - | ABC transporter related RPD_1566 1758658 - 1757378 - | putative branched-chain amino acid ABC transport system substrate-binding protein TERM 1428 1758466 - 1758479 + g 73 -9.5 -3.94877 | CATTGAGCTGCTTGC CGGCG ACGC CGCCG TTCTTGTTGACCCAT RPD_1567 1759790 - 1758717 - | inner-membrane translocator TERM 1429 1759495 - 1759482 - G 70 -2.3 -4.59773 | TGGGATCGTGAAAAA CACCG GGAT CGGCA GCGTGTTGTTGAGAT RPD_1568 1760788 - 1759895 - | inner-membrane translocator RPD_1569 1762922 - 1760994 - | AMP-dependent synthetase and ligase TERM 1430 1761612 - 1761624 + g 71 -9.1 -3.84406 | overlap 1761602 1761606 CTTCATGTCGGCGGC CGAGG CTT CCTCG TTCTTGTAGTAGCCG RPD_1570 1763746 - 1762919 - | ABC transporter related TERM 1431 1763674 - 1763654 - G 89 -11.2 -4.22883 | GATGATGGAAAACAA TTCGCCGT CATTC ACGGCGAA GCTGACCTCGCTCAG TERM 1432 1764158 - 1764183 + H 89 -14.7 -3.90744 | overlap 1764159 1764161 TGATCCTTGCTTGGT GCAGCGAGCCG CGGA CGGCTCGCTGG TTGTTTGGAGCACCG TERM 1433 1764159 - 1764182 + H 90 -18.2 -2.94232 | overlap 1764158 1764161 GATCCTTGCTTGGTG CAGCGAGCCG CGGA CGGCTCGCTG GTTGTTTGGAGCACC TERM 1434 1764161 - 1764180 + H 78 -15 -3.02371 | overlap 1764159 1764158 TCCTTGCTTGGTGCA GCGAGCCG CGGA CGGCTCGC TGGTTGTTTGGAGCA TERM 1435 1764384 - 1764422 + G 78 -14.6 -3.24747 | AATCGCTTGCGCCGG TGTCGGCCAGTCCGAAGT TCA GCTTCGAACGGGTCGACA TTACTGATGTCGAGG RPD_1571 1764242 - 1765303 + | dTDP-glucose 4,6-dehydratase RPD_1572 1765326 - 1765883 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1436 1766152 - 1766121 - g 73 -12.8 -3.40371 | overlap 1766094 TACCGCATCAATGAA GCCGGCGCCGGCGC GGTT GCGACGGCCGCGGC CGATCTCGGCATCCC RPD_1573 1765887 - 1766783 + | dTDP-4-dehydrorhamnose reductase RPD_1574 1766799 - 1767677 + | glucose-1-phosphate thymidylyltransferase TERM 1437 1767659 - 1767687 + T 72 -3.8 -4.63218 | gap 2, overlap 1767662 1767678 TGGCCGATATCTGCT CGACGTCGCCCGAC GTT GACGG-TGACG-CG TTTTCTTCACGCGAA RPD_1575 1769703 - 1767757 - | hypothetical protein TERM 1438 1768436 - 1768417 - G 72 -7 -4.19624 | TAGCGCGAACAGAAA CACCGCGC GGGC GCCCGGCG TCAGACGTGGAAGTC TERM 1439 1769053 - 1769035 - G 71 -14.6 -2.63073 | overlap 1769034 1769032 CTTGTGGAAGAACAG CGCGGTGA GGA TCACCGCG AGCAGCCGCCAGCGT TERM 1440 1769623 - 1769575 - G 80 -15.3 -3.31188 | gap 1, opp_overlap 1769596 1769604, overlap 1769569 1769568 CAGGACAATCACGAA GGCCAGCGCCTCGGGCCACC ATGTGGCGCG GGCGGCCCG-GCCGCTGACC GGCTGCGCTGCACTT RPD_1576 1770541 - 1769846 - | ABC transporter related RPD_1577 1771290 - 1770541 - | ABC transporter related RPD_1578 1772588 - 1771287 - | inner-membrane translocator TERM 1441 1772576 - 1772548 - G 79 -11.5 -3.85817 | opp_overlap 1772540 AGGCGGTCGGACAAA GCCGGCCGCGGCG GCG CGACGCGGGAGGC GAGGTCGGTCATGTT RPD_1579 1773532 - 1772585 - | inner-membrane translocator TERM 1442 1773445 - 1773423 - G 74 -12.8 -3.53012 | CTGGCGTGGGCGAAA TTCAGCACGC CGA GCATGCTGAA GATCACCGTCAGGCC RPD_1580 1774890 - 1773661 - | ABC transporter, periplasmic branched chain amino acid binding protein RPD_1581 1777593 - 1775149 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1443 1776668 - 1776692 + g 100 -14.3 -4.42386 | opp_overlap 1776666 AGCCGCAATTCAATG CCGCGCTCGAA CCA TTCCAGCGCGG TTTTGTGCATCAGCA RPD_1582 1777716 - 1777970 + | hypothetical protein purU 1777946 - 1778809 + | formyltetrahydrofolate deformylase RPD_1584 1779424 - 1778837 - | hypothetical protein RPD_1585 1779787 - 1779488 - | hypothetical protein TERM 1444 1780041 - 1780014 - H 74 -12 -3.41602 | CCCACCGTAGCACAA GACCCTTGGCAA TTCG TTGCCACGGGCC GCGCGGTGAGATCGT RPD_1586 1780187 - 1781365 + | twin-arginine translocation pathway signal TERM 1445 1781464 - 1781424 - f 83 -15.6 -3.21099 | gap 1 CGTGCGCAGCACGAA CCCGGCATCCATAATC-CC GGTC GGTGACTATGGATTCCGGG TCTGCGCCCCAAGGG RPD_1587 1781521 - 1782387 + | inner-membrane translocator RPD_1588 1782384 - 1783415 + | inner-membrane translocator RPD_1589 1783412 - 1784164 + | ABC transporter related TERM 1446 1784492 - 1784469 - g 91 -11.6 -4.2558 | CACCGTCGAGGAAAA CCTGACCGCG GTGG CGCGGCCCGG TCCGTGGACGGTGGC TERM 1447 1784771 - 1784756 - g 75 -4.6 -4.60255 | opp_overlap 1784766, overlap 1784746 1784742 AGAACGCGCGAAAAA TCCTCG GGCT CGCGGA TCGCGTTGTGATATT RPD_1590 1784173 - 1784895 + | ABC transporter related RPD_1591 1784916 - 1786034 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RPD_1592 1786146 - 1787186 + | glycosyl transferase family protein RPD_1593 1788527 - 1787217 - | UDP-glucose 6-dehydrogenase RPD_1594 1788719 - 1789861 + | hypothetical protein TERM 1448 1790748 - 1790719 - g 72 -6.9 -4.25104 | opp_overlap 1790745 GTTTCTGCAGGAAAA CTGGCGCGCCAGC GTCA GCCCGCGCTCCGG AATGCCGGTCTATGA RPD_1595 1790012 - 1791367 + | hypothetical protein TERM 1449 1791570 - 1791540 - g 70 -13.3 -3.07816 | gap 1 CCGCGAGGGACCGAA GGCGGGGATCAGCC CCTG GGC-GATCCGCGCC GCCTGCGAGACGCTC TERM 1450 1792224 - 1792248 + G 71 -12.7 -3.28791 | CGACACCTATGGCGG CGCGGCCCCGC ATG GCGGCGGCGCG TTCTCGGGCAAGGAT RPD_1596 1791427 - 1792623 + | S-adenosylmethionine synthetase TERM 1451 1792857 - 1792813 - f 88 -16.5 -3.25942 | overlap 1792814 ATGCTCGGACAGGAA TCTCGAACGGGATGATGATTC GAG GAAGCATCGTCCCGCTCGAGC GTGCGCCTACCTCAG TERM 1452 1792856 - 1792814 - f 90 -20 -2.55351 | overlap 1792813 TGCTCGGACAGGAAT CTCGAACGGGATGATGATTC GAG GAAGCATCGTCCCGCTCGAG CGTGCGCCTACCTCA RPD_1597 1792960 - 1794375 + | S-adenosyl-L-homocysteine hydrolase TERM 1453 1794497 - 1794470 - T 74 -9.8 -3.80733 | opp_overlap 1794474, overlap 1794474 TCCATCGGACAACAA CGAAGCCCCGGA GCGA TCCGGGGCTTTC TGTTGACAATAAATA TERM 1454 1794493 - 1794474 - T 85 -15 -3.58208 | opp_overlap 1794474, overlap 1794470 TCGGACAACAACGAA GCCCCGGA GCGA TCCGGGGC TTTCTGTTGACAATA TERM 1455 1794474 - 1794493 + T 100 -15 -4.19624 | opp_overlap 1794470 1794474 TCGGACAACAACGAA GCCCCGGA GCGA TCCGGGGC TTTCTGTTGACAATA RPD_1598 1795272 - 1794568 - | hypothetical protein RPD_1599 1795889 - 1795269 - | ExsB TERM 1456 1795370 - 1795346 - G 70 -13 -3.03124 | GCGTATCGCTGAAGA GTTGGCAAGA ATACG TCTTGCCAAC TGGGACTCTCAGCTC RPD_1600 1797223 - 1795886 - | PfkB family carbohydrate kinase RPD_1601 1797612 - 1797220 - | hypothetical protein RPD_1602 1798294 - 1797887 - | PilT protein-like RPD_1603 1798551 - 1798294 - | prevent-host-death protein TERM 1457 1798376 - 1798337 - G 100 -15 -4.56597 | gap 1, overlap 1798305 GCGTCGCGCGAAAAA TCGCCGTCGTCCTGC-GGC ATC GCCAGCAGCACATCGGCGA ACGACGGCGCGTGGG TERM 1458 1798875 - 1798927 + r 77 -12.6 -3.62255 | gap 1, opp_overlap 1798878 1798887, overlap 1798874 1798877 1798878 GCTCGCGCCCCGGAA TGACGGACGAGAGGTGACGCGCCCG TCCG CGGGCGCG-CTCGTCTCGTGCGCTG TTACTTCTTCTTGCC TERM 1459 1798877 - 1798925 + r 84 -15.2 -3.37882 | gap 1, opp_overlap 1798878 1798887, overlap 1798875 1798874 1798878 TCGCGCCCCGGAATG ACGGACGAGAGGTGACGCGCCCG TCCG CGGGCGCG-CTCGTCTCGTGCGC TGTTACTTCTTCTTG TERM 1460 1798924 - 1798878 - R 87 -18.7 -2.70932 | gap 1, opp_overlap 1798877 1798875 1798874 1798878, overlap 1798887 CGCGCCCCGGAATGA CGGACGAGAGGTGACGCGCCCG TCCG CGGGCGCG-CTCGTCTCGTGCG CTGTTACTTCTTCTT TERM 1461 1798878 - 1798924 + r 87 -18.7 -2.61645 | gap 1, opp_overlap 1798878 1798887, overlap 1798877 1798875 1798874 CGCGCCCCGGAATGA CGGACGAGAGGTGACGCGCCCG TCCG CGGGCGCG-CTCGTCTCGTGCG CTGTTACTTCTTCTT RPD_1604 1799161 - 1798928 - | hypothetical protein TERM 1462 1799783 - 1799760 - H 73 -11 -3.5594 | gap 1, overlap 1799751 1799761 AACGGACGGCGCAAA CCTCG-GGCGC TTG GCGCCGCGAGA ACGCGGAGGTGTGGG RPD_1605 1800000 - 1800209 + | hypothetical protein RPD_1606 1800206 - 1800466 + | hypothetical protein RPD_1607 1801253 - 1800552 - | fumarylacetoacetate (FAA) hydrolase RPD_1608 1803128 - 1801326 - | ABC transporter related TERM 1463 1801443 - 1801415 - G 70 -13.1 -3.01712 | overlap 1801417 CGCTGCGTCGCAACA GATCGTCGTGCCG GCC CTGCTCGACGATC TCGCCGGCTTCGACC TERM 1464 1801870 - 1801845 - G 76 -15.5 -2.87132 | gap 1, opp_overlap 1801837 1801866 GTCCTGGCCGACATA GGCGGTCTGCTG CCG CAGC-GACCGCC GCGACACCGCCGCGA TERM 1465 1802295 - 1802259 - G 77 -7.8 -4.34008 | overlap 1802256 1802261 GAGGAAGGAAAAGAA CTGCCCCGGCGTCGCG CCGGT CGCGACCACGCGGTAG CCGCCATACATCAGC RPD_1609 1804368 - 1803355 - | UDP-glucose 4-epimerase RPD_1610 1804556 - 1805500 + | lipopolysaccharide heptosyltransferase I RPD_1611 1806045 - 1805497 - | HAD family hydrolase RPD_1612 1806629 - 1806042 - | phosphoheptose isomerase RPD_1613 1807776 - 1806700 - | lipopolysaccharide heptosyltransferase II TERM 1466 1807977 - 1807989 + G 73 -6.2 -4.4009 | ACATGCTGCTGGTAA CCGG AGGCG CCGG TTTTATCGGATCGAA RPD_1614 1807964 - 1808944 + | ADP-L-glycero-D-manno-heptose-6-epimerase TERM 1467 1809293 - 1809305 + G 75 -9.1 -4.03413 | GGCACGGCCGACCAC CCGCA AGG TGCGG TTTGTGTCCGAACAT TERM 1468 1810040 - 1809987 - g 72 -13.8 -3.06302 | gap 2, opp_overlap 1810031, overlap 1809976 1809974 ATCATCGGCAGCGAA GCCGA-GCTC-GACCTTCGCCTCGCC GAAT GGCGGCGCGAAGGGCTGCGCGTCGGC TTCACCAACGGCTGC RPD_1615 1808970 - 1810442 + | bifunctional ADP-heptose synthase RPD_1616 1810567 - 1812483 + | polysaccharide biosynthesis protein CapD RPD_1617 1812628 - 1813605 + | NAD-dependent epimerase/dehydratase TERM 1469 1813906 - 1813919 + G 75 -9.5 -4.07687 | TCCGGTCCGGCGATC GCGGC TGGC GCCGC TTTTGCGCGAGCGGT RPD_1618 1813624 - 1815036 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase RPD_1619 1815209 - 1816207 + | oxidoreductase-like TERM 1470 1816583 - 1816597 + G 86 -7 -4.89852 | overlap 1816585 AGGTTGTGGTGCTGA CAGGCG CCA CGCCGG TTTTTGTCGATGTCG TERM 1471 1816875 - 1816933 + G 74 -15.2 -3.02144 | overlap 1816867 CTTTCCCGCCAAGCC GCTCGGCTGCTTCGGCGACGGCGGTG CGATCTT CACCGACGATGCCGAACTGGCCGAGG TGTTGCGCAGCATAC RPD_1620 1816276 - 1817427 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1472 1818402 - 1818392 - g 79 -2.4 -5.00616 | opp_overlap 1818398 TGCCGGCGCAAAAAA GTCG CAG CGGC GGGCGTTCGAATTCA RPD_1621 1817487 - 1819016 + | integral membrane protein MviN RPD_1622 1820875 - 1819019 - | carbamoyltransferase TERM 1473 1821400 - 1821435 + G 74 -2.2 -4.82901 | opp_overlap 1821383 1821382, overlap 1821395 GGACGCCCAGCGTGG CCGCGGGCGTGGCGGC GGAC GCGGGCGAGGCGGCGG TTTTTATCGCGGCGG RPD_1623 1821251 - 1821544 + | hypothetical protein TERM 1474 1821591 - 1821614 + F 100 -14.6 -5.19328 | opp_overlap 1821591 CTAACGAATCGAAAA GGTGCATCGG CAAG CCGGTGCACC TTTTTCTTGTCGACT TERM 1475 1821614 - 1821591 - f 91 -12.4 -4.32201 | opp_overlap 1821591 CTAACGAATCGAAAA GGTGCATCGG CAAG CCGGTGCACC TTTTTCTTGTCGACT TERM 1476 1822916 - 1822932 + G 73 -15.1 -2.94099 | CCTACCGCGGCGCCG GGCGGCC GGA GGCCGCC TATGTCATCGAGCGC RPD_1624 1821811 - 1824117 + | carbon-monoxide dehydrogenase RPD_1625 1824321 - 1824770 + | cytochrome c, class II TERM 1477 1824784 - 1824806 + F 81 -14.1 -3.63805 | opp_overlap 1824784 AGTCTCCGCAGGGAA GGCGGGCGC CGCAC GCGTCCGCC TTTGACCTGTGCGCT RPD_1626 1824881 - 1825801 + | putative diheme cytochrome c-553 RPD_1627 1826104 - 1825826 - | regulatory proteins, AsnC/Lrp TERM 1478 1825859 - 1825895 + g 77 -8 -4.4078 | gap 1 CTTGAAGGTGATGAT GGTGTGGGTG-TCCTTG ATGC CCGGGATCACCTGCACC TTTTCGTTGACGAAG RPD_1628 1826221 - 1827021 + | phosphomethylpyrimidine kinase RPD_1629 1827117 - 1827773 + | phosphatidylethanolamine N-methyltransferase TERM 1479 1827850 - 1827863 + G 70 -3.8 -4.54727 | overlap 1827841 1827845 CGACGGCCCGGAACG GCGT TTCCGT ACGC TTTTCATTTCAGACG RPD_1630 1827827 - 1828624 + | metallophosphoesterase RPD_1631 1828624 - 1829682 + | glycosyl transferase, group 1 RPD_1632 1829736 - 1830722 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit RPD_1633 1832319 - 1830823 - | hypothetical protein TERM 1480 1832577 - 1832599 + G 74 -10.4 -3.78934 | overlap 1832581 CGCCGAGGCGGAACG GCGCCAGGCG CTA CGCGCGGCGC TTGTTATCACGGCGA RPD_1634 1832347 - 1833555 + | major facilitator transporter RPD_1635 1834520 - 1833525 - | mandelate racemase/muconate lactonizing enzyme RPD_1636 1834627 - 1835778 + | hypothetical protein RPD_1637 1835781 - 1836551 + | ABC transporter related TERM 1481 1837581 - 1837555 - g 81 -15 -3.61398 | GCGCGCGCCGAACAA CCCCGCCCGCCG CGC CGGCGGGTGGCG CAGTAGGCGCCGGCT RPD_1638 1836634 - 1837587 + | hypothetical protein TERM 1482 1837901 - 1837924 + T 78 -12.4 -3.74872 | gap 1, overlap 1837902 1837905 1837908 GCCACAATTTCGCGA TCCCGCGGCGC GGA GCGCC-CGGGG TTTGCTGCGGTCGCT TERM 1483 1837902 - 1837923 + T 74 -13.7 -2.84602 | gap 1, overlap 1837901 1837905 1837908 CCACAATTTCGCGAT CCCGCGGCGC GGA GCGCC-CGGG GTTTGCTGCGGTCGC RPD_1639 1840776 - 1838455 - | tetratricopeptide TPR_2 TERM 1484 1841070 - 1841099 + H 81 -15.1 -3.07013 | gap 1 TCACAGTCGGACACT GCTCATCGCGGCTC TTG GGGCCG-GATGAGC TGTCTTCGAACCGTC TERM 1485 1843937 - 1843920 - g 73 -14.1 -3.14344 | TACTCGGCCGACGAA GGCGCCG ATGT CGGCGCC GACGAAGGAACGCCC RPD_1640 1841631 - 1844099 + | sulfatase TERM 1486 1844320 - 1844300 - T 100 -18.3 -5.55855 | opp_overlap 1844300 GGCAAAAAAAGAAAA GCGGAGGCC AGA GGCCTCCGC TTTGTCGTTGTTAGT TERM 1487 1844300 - 1844320 + T 100 -18.3 -4.14859 | opp_overlap 1844300 GGCAAAAAAAGAAAA GCGGAGGCC AGA GGCCTCCGC TTTGTCGTTGTTAGT RPD_1641 1850717 - 1844370 - | hypothetical protein TERM 1488 1846941 - 1846970 + g 79 -12.9 -3.75629 | gap 1 TCCCGACAGGATGGT CTCGACGGTGGCTG CGC CGGCCGCCGTC-AG TTTGCGTTCGACGTC TERM 1489 1847001 - 1847040 + g 75 -13.7 -3.31144 | opp_overlap 1847003 GCTGGCCAGCGAGAT CAC-CTGGCTCGACGCCTC GGAG GAGGCGGCGA-CCAGCGTG TTCTGCGCCTCGCGC TERM 1490 1849662 - 1849700 + g 73 -13.9 -3.14344 | gap 1 GGCGGTCAGCCGTTC GCTGGCGTCGAGCACCGC GCGG GTGGT-CTCGGCGCTGGC TTCCTCGAGGCGGTC TERM 1491 1850967 - 1850951 - H 72 -3.7 -4.65895 | overlap 1850965 CCGCCTACGTAAAAA TCCTG TGGGAAG CAGGA AACGCTGCGAAATTG TERM 1492 1851010 - 1850970 - H 71 -8.9 -3.84246 | opp_overlap 1850970, overlap 1850965 GTGGGAAGCAGGAAA CGCTGCGAAATTGAGGACA AAA TGGCCTCAAACTTGCGGCG TTGTCCCGAAATGAT RPD_1642 1851135 - 1851479 + | hypothetical protein RPD_1643 1851621 - 1851941 + | ferredoxin TERM 1493 1851955 - 1851979 + T 79 -11.4 -3.83026 | opp_overlap 1851945 AATCAGGCATTCGAA GCGCGTGAGC CTCGC GCTCACGCCC TTTCATGTCCGCAGG RPD_1644 1852550 - 1852095 - | thioesterase superfamily protein TERM 1494 1852606 - 1852617 + H 78 -3.6 -4.97402 | overlap 1852596 CTTGAGCTAGAACAA GGTG CCAC CGCC TTTTTATGGCTTTTC RPD_1645 1852711 - 1853739 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1495 1853802 - 1853823 + T 100 -18.7 -5.26316 | CGAGTTGATAGTTCA GGGCGCGCC GACC GGCGCGCCC TTTTTTGTGACCTGG RPD_1646 1854824 - 1853844 - | NAD-dependent epimerase/dehydratase RPD_1647 1855810 - 1854824 - | GDP-mannose 4,6-dehydratase TERM 1496 1855968 - 1855958 - R 73 -8.2 -4.07885 | overlap 1855959 CACTTCGCTCGAAAA CGCC AGA GGCG ATCGGCGCGACATGG RPD_1648 1857089 - 1856004 - | glycosyl transferase family protein TERM 1497 1856644 - 1856658 + g 72 -7 -4.28994 | GGCCGCATTTGCTTG CCGCGC GAT GCGCCG TTTTCGTCGATGATC RPD_1649 1857299 - 1858648 + | glycosyl transferase, group 1 RPD_1650 1858656 - 1859963 + | hypothetical protein TERM 1498 1860062 - 1860082 + G 70 -8.9 -3.97444 | overlap 1860065 CGATCCGCTTGTTTG CAATGGCGG CCG CCGCCGTCG TTTCATTCCTGATGT RPD_1651 1860031 - 1860687 + | hypothetical protein RPD_1652 1863412 - 1860803 - | hypothetical protein RPD_1653 1864252 - 1863431 - | hypothetical protein RPD_1654 1864347 - 1864601 + | hypothetical protein RPD_1655 1866676 - 1864673 - | hypothetical protein RPD_1656 1867814 - 1866753 - | hypothetical protein RPD_1657 1868212 - 1868718 + | hypothetical protein TERM 1499 1868773 - 1868752 - T 84 -11.5 -4.16681 | opp_overlap 1868752 AAGATGAGGCTAAAA GTCGCGCGA GAAA TCGCGCGGC TTTTTTTTTGTTTGC TERM 1500 1868752 - 1868773 + T 100 -13.7 -6.4753 | opp_overlap 1868752 AAGATGAGGCTAAAA GTCGCGCGA GAAA TCGCGCGGC TTTTTTTTTGTTTGC RPD_1658 1869365 - 1868925 - | hypothetical protein TERM 1501 1869172 - 1869154 - G 73 -13.1 -3.33696 | GTCGCGGTGAAGTAA CCGCCGG CGAAC CCGGCGG TCGCCACCAGCCACC TERM 1502 1869454 - 1869404 - H 78 -11.8 -3.76492 | gap 2, overlap 1869405 GTTAATCCTAGGAAA CCGCGGCGACGGCGGCAAGCGGGC GTCGG GCCCGCCTGGCGCAG--GCCGCAA GTGGACCGCGCCATC TERM 1503 1869453 - 1869405 - H 70 -13.1 -2.85574 | gap 2, overlap 1869404 TTAATCCTAGGAAAC CGCGGCGACGGCGGCAAGCGGGC GTCGG GCCCGCCTGGCGCAG--GCCGCA AGTGGACCGCGCCAT RPD_1659 1869541 - 1870131 + | hypothetical protein RPD_1660 1870710 - 1870279 - | hypothetical protein TERM 1504 1870788 - 1870816 + r 81 -10.1 -4.22338 | opp_overlap 1870784, overlap 1870809 AATCGCGAAGAGGCG GCCCGTGCGGCGC CGG GCGCTGCGAGAGC TTTTCCGGTTCTGAT TERM 1505 1870809 - 1870854 + r 78 -10 -4.02817 | gap 3, opp_overlap 1870839, overlap 1870788 GCGGCGCCGGGCGCT GCGAGAGCTTTTCCGGTTCTGAT CAA ATCAGAACCGG--A-GCTCTCAC TTCTTGTTCTGACGC RPD_1661 1871444 - 1870914 - | putative phosphohistidine phosphatase, SixA RPD_1662 1871538 - 1872998 + | FAD dependent oxidoreductase TERM 1506 1873457 - 1873419 - g 70 -13 -2.98881 | overlap 1873414 1873412 ACACGAAATACGACA GCGGCACCGGCTGGCCGA GCT TCTGGCAGCCGCTGCCGA ACGCGGTCGGCGAGC RPD_1663 1873139 - 1873636 + | methionine sulfoxide reductase B RPD_1664 1873798 - 1875309 + | hypothetical protein RPD_1665 1875598 - 1875326 - | hypothetical protein RPD_1666 1880088 - 1875805 - | ATP-binding region, ATPase-like TERM 1507 1879258 - 1879212 - G 100 -20.9 -3.04263 | gap 1, overlap 1879171 ACGGGATCGGCAACA CGATCGCCTGGCTCGGCGGCTG GCGC CAGCCGCCG-GCCGGGAAATCG AATCCGAATTGCGCC RPD_1667 1880370 - 1882202 + | hypothetical protein TERM 1508 1882381 - 1882409 + G 77 -12.4 -3.68351 | opp_overlap 1882380 1882365 CGTCGATCAGATCAC CACCACTGCCGG CCCGT CTGGCAGCGGTG TTTCGATCATCGGCG RPD_1668 1882247 - 1884118 + | flagellar hook-associated protein RPD_1669 1884126 - 1885733 + | hypothetical protein TERM 1509 1885784 - 1885753 - f 70 -10.1 -3.57418 | gap 1, opp_overlap 1885754 1885755, overlap 1885749 1885755 GACTTACTAAACGAA CAGCCGCCGTTGCG TCGAT CGCA-CGGCGGCCT TTTTGCGTGTCCGAT TERM 1510 1885754 - 1885783 + F 100 -11.4 -4.70659 | gap 1, opp_overlap 1885753 1885749 1885755, overlap 1885755 ACTTACTAAACGAAC AGCCGCCGTTGCG TCGAT CGCA-CGGCGGCC TTTTTGCGTGTCCGA TERM 1511 1885755 - 1885782 + F 83 -14.9 -3.41913 | gap 1, opp_overlap 1885753 1885749 1885755, overlap 1885754 CTTACTAAACGAACA GCCGCCGTTGCG TCGAT CGCA-CGGCGGC CTTTTTGCGTGTCCG TERM 1512 1885782 - 1885755 - f 82 -14.9 -3.35849 | gap 1, opp_overlap 1885755 1885754, overlap 1885753 1885749 CTTACTAAACGAACA GCCGCCGTTGCG TCGAT CGCA-CGGCGGC CTTTTTGCGTGTCCG TERM 1513 1887354 - 1887298 - g 73 -13.8 -3.14051 | overlap 1887296 CCACCGGCACCAAGA GCGCGACCATTGCCA-CCAGCGTCGCCA CAG TGACGACCCCGGCCGGCAACG-TCGCGT CGACGGTGCTGAGCG RPD_1670 1886025 - 1888313 + | flagellin TERM 1514 1888366 - 1888347 - f 91 -16.4 -3.59315 | opp_overlap 1888347 TTAACGATCTGGAAA CGGCGGGG GAAA CCCCGCCG TTTTTCTTTGATTCG TERM 1515 1888347 - 1888366 + F 100 -16.4 -5.38326 | opp_overlap 1888347 TTAACGATCTGGAAA CGGCGGGG GAAA CCCCGCCG TTTTTCTTTGATTCG TERM 1516 1888421 - 1888438 + F 72 -2.6 -4.75308 | overlap 1888407 1888403 TGCCGGCGGCGGGGT CGCCGA AGCCGG TCTGCG TTTTTAGATATTGAT TERM 1517 1891091 - 1891146 + F 85 -15.6 -3.46534 | gap 1, opp_overlap 1891090 1891107 1891119, overlap 1891090 1891095 CCCGAAACACAGCAC TGGATCGTCACGCAAAGC-CTGCGCAT AAC AAGCGTACAGCTTGGCGTGACGATTCA TCTTTGGTCGCATTG TERM 1518 1891095 - 1891142 + F 76 -12.8 -3.48269 | gap 1, opp_overlap 1891090 1891107 1891119, overlap 1891091 1891090 AAACACAGCACTGGA TCGTCACGCAAAGC-CTGCGCAT AAC AAGCGTACAGCTTGGCGTGACGA TTCATCTTTGGTCGC flbT 1891184 - 1891564 + | flagellar biosynthesis repressor FlbT flaF 1891567 - 1891935 + | flagellar biosynthesis regulatory protein FlaF TERM 1519 1892012 - 1891981 - T 95 -10.3 -4.5464 | overlap 1891984 TACAGACAAGCAAAA TC-ACCCGCGCTTGC GACA GCAAGC-CGGGTCGA TAAGATCAATGTCAG TERM 1520 1892008 - 1891984 - T 70 -12.2 -3.21057 | gap 1, overlap 1891981 AGACAAGCAAAATCA CCCGCGCTTGC GACA GCAAGC-CGGG TCGATAAGATCAATG RPD_1674 1892467 - 1892033 - | hypothetical protein TERM 1521 1892579 - 1892552 - R 100 -17.7 -3.59979 | opp_overlap 1892574 TTCGCGGACGCCAAA GCACCGCCGGC TCGAGG GCCGGCGGCGC GTGGAAACGGGGCGT RPD_1675 1893099 - 1892614 - | hypothetical protein RPD_1676 1893461 - 1893117 - | chemotactic signal-response protein CheL flgI 1894579 - 1893458 - | flagellar basal body P-ring protein fliX 1894890 - 1895306 + | flagellar assembly regulator FliX TERM 1522 1895518 - 1895499 - g 74 -12.2 -3.52113 | overlap 1895497 ACCCTCCGAGAAAGA GCCGTTCA TGAA TGAACGGC AGCGCGAGTATTTTC TERM 1523 1895685 - 1895651 - g 72 -12 -3.53012 | GCGCCTCGTCGGAAA CCGACCGCGCTATCGA ACT TCGCGCGCGCGATCGG CAGCGCAAGCTGATC RPD_1679 1895455 - 1895871 + | transcriptional regulators, TraR/DksA family TERM 1524 1895911 - 1895933 + T 100 -14.9 -5.37043 | opp_overlap 1895911 1895914 GGTCGTCCAAGATCA GAAGCGGGC CTTGC GCCCGCTTC TTTTTTGTCTGCCGT TERM 1525 1895933 - 1895911 - T 75 -14.9 -2.73875 | opp_overlap 1895911, overlap 1895914 GGTCGTCCAAGATCA GAAGCGGGC CTTGC GCCCGCTTC TTTTTTGTCTGCCGT TERM 1526 1895930 - 1895914 - T 71 -10.8 -3.52073 | opp_overlap 1895911, overlap 1895911 CGTCCAAGATCAGAA GCGGGC CTTGC GCCCGC TTCTTTTTTGTCTGC RPD_1680 1896257 - 1895991 - | hypothetical protein TERM 1527 1896483 - 1896439 - R 70 -10 -3.58536 | gap 2, overlap 1896427 1896431 1896440 AAAGGCACTCGGAAA GGGCCGCGGCCTCCATCCGG GGGAGAG CCGGA-GGAGGCCGC-GCTG GTACACCTGACCGCG TERM 1528 1896482 - 1896440 - R 72 -13.5 -2.7464 | gap 2, overlap 1896427 1896431 1896439 AAGGCACTCGGAAAG GGCCGCGGCCTCCATCCGG GGGAGAG CCGGA-GGAGGCCGC-GCT GGTACACCTGACCGC flgH 1897303 - 1896545 - | flagellar basal body L-ring protein flgA 1898409 - 1897309 - | flagellar basal body P-ring biosynthesis protein FlgA flgG 1899211 - 1898423 - | flagellar basal body rod protein FlgG flgF 1899984 - 1899223 - | flagellar basal body rod protein FlgF TERM 1529 1900121 - 1900134 + H 74 -5.3 -4.56597 | overlap 1900120 AAAGACGAGATATTT CAATC TGTT GATTG TTTTTGAAGGGGGCG TERM 1530 1900401 - 1900373 - g 73 -9.5 -3.94823 | gap 1 GAGAAACCAGAAGAA GGCGCCGAAGCC GCAGAA GGCG-CGGCGCC GAAGAGCAAGAAAAA TERM 1531 1900459 - 1900417 - g 89 -5.4 -5.19251 | opp_overlap 1900432 1900435 GAAGAGCAAGAAAAA GCTCATCATCATCATCGCCG CTG CAGCGCTGCTGCTGATCGGC GGCGGCGCTGCAGCG TERM 1532 1900432 - 1900477 + G 100 -21.1 -3.82084 | opp_overlap 1900417, overlap 1900435 GCTCATCATCATCAT CGCCGCTGCAGCGCTGCTGCT GATC GGCGGCGGCGCTGCAGCGTGG TTCTTCCTGTTCGCG TERM 1533 1900435 - 1900474 + G 100 -25.8 -2.98778 | opp_overlap 1900417, overlap 1900432 CATCATCATCATCGC CGCTGCAGCGCTGCTGCT GATC GGCGGCGGCGCTGCAGCG TGGTTCTTCCTGTTC fliL 1900346 - 1900849 + | flagellar basal body-associated protein FliL fliM 1900856 - 1902058 + | flagellar motor switch protein FliM RPD_1687 1902055 - 1902489 + | hypothetical protein RPD_1688 1902486 - 1903253 + | hypothetical protein TERM 1534 1903297 - 1903264 - T 71 -12.5 -3.04501 | gap 1, opp_overlap 1903264 1903295, overlap 1903220 1903283 AGTAATGGCCGAACA GCGGTC-GGTCCTGAT CCA ATCCGAACCGGACCGC TTCGATGATGCGTCT RPD_1689 1903675 - 1903346 - | hypothetical protein TERM 1535 1904981 - 1904947 - g 82 -15.6 -3.48276 | GCGCGGCGCAGAGAA CGGCAAGGCCGACACC CAC GGTGCCGGCGACGCCG ACCACGCGACGACGC TERM 1536 1905392 - 1905413 + G 70 -12.9 -3.01712 | CTCACATTCACCTTC GCGACGCCG ACCC CGGCGGCGC TGTTCCGGCGCGGCG TERM 1537 1907010 - 1907063 + G 74 -14.6 -3.05844 | gap 2, opp_overlap 1906977 1907007 GCGATGAGATCATCC GCCGGCTCGCC-GATCG-GCTGGTCG CTGT CGATCTGCTCGATCAGGCGAGCGAGC TGTTGCAGTACCAGG RPD_1690 1903925 - 1907767 + | hypothetical protein fliP 1908585 - 1907818 - | flagellar biosynthesis protein FliP RPD_1692 1909625 - 1908582 - | hypothetical protein TERM 1538 1909165 - 1909205 + g 72 -13.2 -3.14132 | gap 1, opp_overlap 1909158 1909159 CCGGGAAATTCGGTG GTGCGCCGCTGCGGCATCG GCGG CGGCGCCGGA-CGGCGCGC TTCGTCGGCGAACGA flgB 1909962 - 1910372 + | flagellar basal body rod protein FlgB flgC 1910398 - 1910823 + | flagellar basal body rod protein FlgC fliE 1910849 - 1911154 + | flagellar hook-basal body protein FliE TERM 1539 1911174 - 1911188 + F 76 -9.2 -4.07568 | opp_overlap 1911160, overlap 1911169 AGGCCCTCGTCCTGA GCGGCC GCA GGTCGC TTTTCGCAGGGCGGG fliQ 1911295 - 1911558 + | flagellar biosynthesis protein FliQ fliR 1911668 - 1912435 + | flagellar biosynthesis protein FliR TERM 1540 1912525 - 1912509 - g 85 -7.9 -4.74767 | overlap 1912510 1912511 AGAACCAACACAAAA GCGCCTC GAC GACGCGC TCAAGCGCGGCGACG flhB 1912462 - 1913535 + | flagellar biosynthesis protein FlhB RPD_1699 1914234 - 1913590 - | hypothetical protein TERM 1541 1913794 - 1913808 + g 83 -8.5 -4.58685 | CCCAGATAATGTTGC GCCGG TCCAC CCGGC TTTTTGGAACGCTTT TERM 1542 1916057 - 1916005 - g 75 -14.3 -3.28416 | gap 3, opp_overlap 1916011, overlap 1916008 1916011 CATCATGCAGATCAA GC-AGAACGCCACCCGC-GCCGCGAC GCTG GT-GCGGCAGCTGCTGGCGTTCTCGC GCAAGCAGACGCTGC TERM 1543 1916053 - 1916008 - g 73 -14.8 -2.82023 | opp_overlap 1916011, overlap 1916005 1916011 CATGCAGATCAAGCA GAACGCCACCCGC-GCCGCGAC GCTG GT-GCGGCAGCTGCTGGCGTTC TCGCGCAAGCAGACG TERM 1544 1916050 - 1916011 - g 70 -10.7 -3.55487 | opp_overlap 1916011, overlap 1916008 1916005 GCAGATCAAGCAGAA CGCCACCCGC-GCCGCGAC GCTG GT-GCGGCAGCTGCTGGCG TTCTCGCGCAAGCAG RPD_1700 1914476 - 1917028 + | multi-sensor hybrid histidine kinase TERM 1545 1917423 - 1917458 + G 83 -14.6 -3.67597 | gap 1, overlap 1917441 GGCAGCCCGGGAATG GCCGCTC-CGGCCGCCG GCG CGGCCGCCAAGGGCGGC TTCTTCAATCGGCCC RPD_1701 1917189 - 1918184 + | import inner membrane translocase, subunit Tim44 TERM 1546 1918210 - 1918233 + F 100 -19.6 -6.06723 | opp_overlap 1918178 1918210 CCCTCAGAGACCCAA GCGCCGCGGA TGTT TCCGCGGCGC TTTTTTTTTGGCGCG TERM 1547 1918233 - 1918210 - f 95 -19.6 -3.15999 | opp_overlap 1918210, overlap 1918178 CCCTCAGAGACCCAA GCGCCGCGGA TGTT TCCGCGGCGC TTTTTTTTTGGCGCG TERM 1548 1918404 - 1918460 + G 79 -13.6 -3.71848 | gap 2, opp_overlap 1918392 AAAGCCGCGGCAGTT GC-GGCCATGGCCGCCTG-GGCTGCGCC GGC GGCGCAGGCGCAGACGGCCAATGCGAGC TTCTTCGTCACCAGC RPD_1702 1918353 - 1919039 + | hypothetical protein TERM 1549 1919245 - 1919282 + G 83 -14.1 -3.85817 | gap 1, opp_overlap 1919245 1919258, overlap 1919246 CGATGATGCAGATGA TGGCGGCGAACAAGGGCG CGC CGCCCTTCG-CGCCGCCG TTTCTCAAAGCAGGT TERM 1550 1919246 - 1919281 + G 76 -15.4 -2.91276 | gap 1, opp_overlap 1919245 1919258, overlap 1919245 GATGATGCAGATGAT GGCGGCGAACAAGGGCG CGC CGCCCTTCG-CGCCGCC GTTTCTCAAAGCAGG RPD_1703 1919106 - 1919816 + | glutathione S-transferase-like RPD_1704 1920191 - 1919832 - | glutathione-dependent formaldehyde-activating, GFA TERM 1551 1920357 - 1920339 - R 89 -13.1 -4.14511 | AAGCGGATGTGAAAA GCCCCGC GCGAA GCGGGGC TGATCACCGGGGTAG RPD_1705 1921216 - 1920728 - | hypothetical protein RPD_1707 1921981 - 1921610 - | hypothetical protein RPD_1706 1921431 - 1921664 + | hypothetical protein TERM 1552 1921973 - 1921986 + gF 93 -8.1 -5.03145 | overlap 1921971 GCAGACGCGCCAACG GAGCG CCAC CGCTC TTTTTTGAACCCTTC RPD_1708 1922059 - 1923714 + | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit RPD_1709 1923877 - 1924560 + | hypothetical protein RPD_1710 1925580 - 1924573 - | hypothetical protein TERM 1553 1925406 - 1925449 + g 70 -10.8 -3.55444 | gap 1, overlap 1925386 1925408 1925432 1925435 GCGGCGGTGAGGTCG GCGCGCAGGCGGCGCCGCTGA GAT TCTGCCGCG-CGTCGGCGCTC TTTCCGAGATCGCCG TERM 1554 1925408 - 1925447 + g 70 -12 -3.35597 | gap 1, overlap 1925386 1925406 1925432 1925435 GGCGGTGAGGTCGGC GCGCAGGCGGCGCCGCTGA GAT TCTGCCGCG-CGTCGGCGC TCTTTCCGAGATCGC RPD_1711 1926286 - 1925990 - | hypothetical protein RPD_1712 1926538 - 1927245 + | hypothetical protein RPD_1713 1927839 - 1927267 - | hypothetical protein TERM 1555 1929051 - 1929027 - g 81 -10.6 -4.11216 | overlap 1929028 GCTGCATCGTCAAAA CCGTCGCCGC GCAAG GCGGCGGCGA ACGCGGCGGCCGCCG RPD_1714 1928169 - 1929071 + | nuclear protein SET RPD_1715 1929476 - 1929078 - | hypothetical protein RPD_1716 1929590 - 1930411 + | transcriptional regulator RPD_1717 1930484 - 1931149 + | DSBA oxidoreductase RPD_1718 1932380 - 1931214 - | hypothetical protein TERM 1556 1931987 - 1931965 - G 74 -9.8 -3.78775 | opp_overlap 1931975 TCGCGGAGCAGCAAA GCGCGAGC GCCCGAA GCCCGCGC CTGTGCGATCATCAC TERM 1557 1932397 - 1932422 + H 77 -14 -3.31144 | gap 1 CCTTCCCGCGCGAGC GCGCAGCCGCG AGTCA CGCGGC-GCGC TTGTGCCGGTCGGAA TERM 1558 1932519 - 1932541 + H 100 -10.4 -5.09426 | opp_overlap 1932499, overlap 1932509 GCTTGCCGGCGCGAG CGGCCGGGCG CGG CGCCGGTCCG TTTTTTGAGGTTCGG TERM 1559 1933716 - 1933706 - g 79 -6.8 -4.59773 | CCCGACCGCGAAAAA GCTC GAA GAGC GGCAGCGCAACAAGC RPD_1719 1932558 - 1934105 + | peptidase C14, caspase catalytic subunit p20 TERM 1560 1934128 - 1934149 + T 71 -5.7 -4.25104 | opp_overlap 1934130, overlap 1934129 GCAATGCGGTCGACG AAGGCGAGC CACG GCTCGCCCG TTTTACTGGAAGGCG TERM 1561 1934147 - 1934130 - T 73 -12.7 -3.14463 | opp_overlap 1934129 1934128 AATGCGGTCGACGAA GGCGAGC CACG GCTCGCC CGTTTTACTGGAAGG RPD_1720 1934391 - 1934152 - | type IV pilus assembly PilZ TERM 1562 1934477 - 1934449 - R 83 -12.3 -4.0616 | opp_overlap 1934458 CATGCGAATTACAAA CGGCTGAACGCGA TCA CCGCGCCCGGCCG GTGTCGCTTTACACT TERM 1563 1934458 - 1934484 + r 71 -9.5 -3.70505 | gap 2, opp_overlap 1934449, overlap 1934478 TACAAACGGCTGAAC GCGATCACCGCGC CCG GC-CGGTG-TCGC TTTACACTTCGTTTA TERM 1564 1934523 - 1934505 - R 78 -11.6 -3.72695 | ACTTCGTTTACCAAA CGCCCCTG CAC CGGGGGCG TCCGGGGCCGGCCCC RPD_1721 1935005 - 1934541 - | thioesterase superfamily protein RPD_1722 1935313 - 1935600 + | hypothetical protein TERM 1565 1935592 - 1935582 - f 100 -8.2 -5.33331 | CAAACAGAAGAAAAA CGGC TCC GCCG CGGAATAGAGTAGGA RPD_1723 1935866 - 1936552 + | cyclic nucleotide-binding RPD_1724 1936942 - 1936772 - | hypothetical protein TERM 1566 1937123 - 1937157 + r 74 -14.2 -2.5547 | opp_overlap 1937113 1937112 1937131, overlap 1937122 1937126 1937129 CAAATCGTTGGCGGG CGGCAAGAGCCGCCCT CCC GGGGCAGCCCTTGTCG ATTCGTCTGAGCGGT RPD_1725 1937531 - 1937172 - | hypothetical protein TERM 1567 1937649 - 1937631 - R 70 -10.2 -3.54741 | CACGATCTTTGCAAA GCGACGGG TCA CTCGTCGC GCAACGGCAGCGGCG TERM 1568 1937924 - 1937891 - R 100 -16.1 -4.0251 | ATCAGCAGAACGAAA GAGAGCCCCGAAC GAGGCCAT GTTCGGGGCTCCC CGTCAGCGTCGGAAC RPD_1726 1938264 - 1938124 - | hypothetical protein RPD_1727 1938857 - 1938459 - | response regulator receiver RPD_1728 1939032 - 1939214 + | hypothetical protein RPD_1729 1939561 - 1939301 - | hypothetical protein recA 1940264 - 1941355 + | recombinase A TERM 1569 1941544 - 1941499 - T 93 -7.2 -5.18726 | gap 3, opp_overlap 1941499 1941498, overlap 1941500 GCGTCAGAACAAAAA GTTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAAG ATTATTAGTTGTTTG TERM 1570 1941543 - 1941500 - T 76 -10.7 -3.70512 | gap 3, opp_overlap 1941499 1941498, overlap 1941499 CGTCAGAACAAAAAG TTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAA GATTATTAGTTGTTT RPD_1731 1944703 - 1941809 - | glycine dehydrogenase TERM 1571 1943497 - 1943516 + g 78 -15 -3.29144 | GTTCGGCCTCGGCGC GCGCGACG ATGG CGTCGCGC TTGTCGCCGACCTCG RPD_1732 1945238 - 1944873 - | glycine cleavage system protein H RPD_1733 1946395 - 1945247 - | glycine cleavage system aminomethyltransferase T TERM 1572 1945302 - 1945275 - G 72 -5.4 -4.36914 | gap 1, overlap 1945276 1945279 GTGTTCGGGACAAAA GGC-ATCGCGGCG ACG CGCAGCGGCAGCC GCTGGCCGCGCACTT TERM 1573 1945377 - 1945330 - G 76 -8.4 -4.17048 | gap 1, overlap 1945364 CTTCGGCGAAAACAA CGGTGCCGATGG-CGGCCTGC GCGGTCG GCAGATAGCCCATCGCCACCG GCGCGTTCAGGCTCG TERM 1574 1946931 - 1946904 - g 86 -9.1 -4.57569 | overlap 1946906 1946915 CTACTTTGCGAAAAA CGGCCACGACA TCGTAC CGTCGTCGCCG CTGGTGCCGCGCAAC alaS 1946851 - 1949526 + | alanyl-tRNA synthetase RPD_1735 1951730 - 1949949 - | sodium/hydrogen exchanger TERM 1575 1951530 - 1951484 - G 72 -13.7 -3.04144 | overlap 1951491 GCCCGATGGTGAACA GCAGGAAGGCGACG-CCGAGCTC CGC GAGC-CGGTCGACGGCGTCCTGC GAGGTGATGGTAATC TERM 1576 1951956 - 1951974 + G 86 -9.5 -4.70515 | opp_overlap 1951953 GATTTCGACAATCGT GGCCGGC CTCGT GCTGGCC TTTATTTTCGGTGTC RPD_1736 1951924 - 1953594 + | potassium efflux system protein TERM 1577 1953700 - 1953680 - T 100 -14 -5.33026 | opp_overlap 1953672 1953680 TAACGCAAACAAAAA GGCGCGGA GGACA TCCGCGCC TTTCGTATTTTGGGC TERM 1578 1953680 - 1953700 + T 90 -14 -4.07678 | opp_overlap 1953680, overlap 1953672 TAACGCAAACAAAAA GGCGCGGA GGACA TCCGCGCC TTTCGTATTTTGGGC RPD_1737 1954962 - 1953739 - | isocitrate dehydrogenase TERM 1579 1955299 - 1955272 - H 75 -12 -3.59979 | gap 1 GCTTGGCAGCCCAAA GGCGG-CGGAACG GGC CGTTGCGGCCGCC CCGTTGAAGCTCCGC TERM 1580 1955409 - 1955437 + G 78 -10.1 -4.06611 | opp_overlap 1955407 1955412, overlap 1955412 CGGCACCGACAAATC CAAGCCCGCCGCG GAC CTCGCCGGGCCTG TTGTTATTCTGGTTG TERM 1581 1956001 - 1956015 + G 74 -10 -3.85698 | opp_overlap 1955972 1955989 AACCTCGTCGCCGAA CTCGAC CGC GTCGAG TTTCTCCGCCCGCCG RPD_1738 1955383 - 1956576 + | RNA methyltransferase TrmH, group 1 TERM 1582 1956576 - 1956610 + T 86 -18 -2.58272 | opp_overlap 1956576, overlap 1956573 GACGGCGATGCAATA GGGCTTCGATTCCGAT TGA ATCGGAACCGAAGCTC TCACTTGATGGTCTG TERM 1583 1956610 - 1956576 - T 90 -18 -3.08996 | opp_overlap 1956573 1956576 GACGGCGATGCAATA GGGCTTCGATTCCGAT TGA ATCGGAACCGAAGCTC TCACTTGATGGTCTG RPD_1739 1958337 - 1956658 - | chemotaxis sensory transducer TERM 1584 1957089 - 1957063 - G 74 -12.3 -3.62275 | opp_overlap 1957066 AGCCACCACCGCAAA GC-CGCGGCCGGC CTC GCCGGC-GCGTGC CGCTTCGATGGTCGC RPD_1740 1958655 - 1959071 + | hypothetical protein RPD_1741 1959335 - 1959817 + | transcription elongation factor regulatory protein RPD_1742 1960793 - 1960038 - | cyclic nucleotide-binding TERM 1585 1960084 - 1960114 + g 72 -6.9 -4.21936 | gap 1, opp_overlap 1960085, overlap 1960085 GGTTTCTCGTGCAAC ACCGCGTTCAGCAG CGAG CTG-TGAACGTGGA TTTTCCCATTGTAGC TERM 1586 1961368 - 1961380 + G 79 -6.9 -4.57569 | overlap 1961369 ACAGTCCAAACAGTC TGGCG CGC CGCCG TTTTTCCCCCAGTGA RPD_1743 1961123 - 1961395 + | hypothetical protein RPD_1744 1961596 - 1961970 + | hypothetical protein TERM 1587 1962485 - 1962472 - g 73 -9.5 -3.93288 | GTCGAGCGAATCAAA GCGGC GCGG GCCGC GATCGATGCGACCGG RPD_1745 1962067 - 1962897 + | hypothetical protein TERM 1588 1962930 - 1962906 - T 100 -11.4 -4.8622 | opp_overlap 1962906 GGCCTGAACGAAAAA TGCCCGAGGC GCATG ACCCCGGGCA TTTGAGACGAATGGA RPD_1746 1963282 - 1962959 - | hypothetical protein RPD_1747 1963587 - 1964354 + | phosphoribosylaminoimidazole-succinocarboxamide synthase RPD_1748 1964519 - 1964761 + | phosphoribosylformylglycinamidine synthase subunit PurS RPD_1749 1964764 - 1965465 + | phosphoribosylformylglycinamidine synthase I TERM 1589 1965475 - 1965504 + T 75 -14.3 -2.78384 | gap 1 GCTTAGTCGCCGTCA TTCCGGG-GCGCGC GGT GCGCGAACCCGGAA TCTGATCCACGCAGG RPD_1750 1966102 - 1965581 - | thioesterase superfamily protein RPD_1751 1966240 - 1967604 + | tryptophan synthase subunit beta TERM 1590 1967829 - 1967795 - f 76 -10.5 -3.9122 | overlap 1967797 GATCTTTCTAAACAA CAGCCACCGCGCCGG CCCCT CCGGCGCGCCTGCAG GATTGCGCCGAAATG TERM 1591 1967827 - 1967797 - f 75 -11.7 -3.54488 | overlap 1967795 TCTTTCTAAACAACA GCCACCGCGCCGG CCCCT CCGGCGCGCCTGC AGGATTGCGCCGAAA RPD_1752 1967842 - 1970052 + | phosphoribosylformylglycinamidine synthase II TERM 1592 1970048 - 1970093 + T 93 -8.6 -5.18726 | gap 3, opp_overlap 1970049, overlap 1970049 ACATGGGCGGGAAGA ACTAGAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTAGC TTTTTGTTCTGACGC TERM 1593 1970049 - 1970092 + T 78 -12.1 -3.70512 | gap 3, opp_overlap 1970049, overlap 1970048 CATGGGCGGGAAGAA CTAGAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTAG CTTTTTGTTCTGACG TERM 1594 1970092 - 1970049 - T 75 -12.1 -3.61715 | gap 3, opp_overlap 1970049 1970048 CATGGGCGGGAAGAA CTAGAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTAG CTTTTTGTTCTGACG TERM 1595 1970218 - 1970273 + T 76 -13.4 -3.17622 | gap 3, overlap 1970218 1970234 1970237 1970246 GTAGCGGCCGGCAAT CGCGGCC-CATCCTTCGAGGCGCGCGC AACAG GCGCGCGCATC--AGGATGAGGCGGTG TGTGTTGTGGGCGTG RPD_1753 1971482 - 1970298 - | acyltransferase 3 TERM 1596 1971567 - 1971548 - R 71 -5.6 -4.28254 | gap 1, opp_overlap 1971548 1971547 1971539, overlap 1971549 CGGCAAGATCGAAAA TGCGG-GCG AGG CGCGCCGCC TGCTACGCCGGCAAT RPD_1754 1971932 - 1971570 - | hypothetical protein RPD_1755 1972124 - 1972360 + | BolA-like protein RPD_1756 1972381 - 1973571 + | low temperature requirement A RPD_1757 1973608 - 1974366 + | hypothetical protein RPD_1758 1975376 - 1974405 - | hypothetical protein TERM 1597 1975021 - 1974991 - G 70 -11 -3.53811 | overlap 1974974 GCGAGGTCCGGGAAA TCGCGGCGCAGTCC CTC GGCCTGCGCGGTGA TGAAATCGCCGGAGA RPD_1759 1976801 - 1975422 - | hypothetical protein RPD_1760 1976913 - 1977296 + | glutaredoxin-like protein RPD_1761 1977536 - 1977832 + | Appr-1-p processing RPD_1762 1977887 - 1979182 + | beta-lactamase RPD_1763 1979457 - 1979768 + | hypothetical protein TERM 1598 1979823 - 1979858 + T 81 -14 -3.61398 | gap 1, opp_overlap 1979823 1979824 1979828, overlap 1979824 1979828 GTTCGATCGCCAAAA TCCAACGCGCGCC-CTC ATC GAGTGGCGCGCGTTCGC TTATTGACGACGCAG TERM 1599 1979858 - 1979823 - T 93 -14 -4.11216 | gap 1, opp_overlap 1979823 1979824 1979828, overlap 1979824 1979828 GTTCGATCGCCAAAA TCCAACGCGCGCC-CTC ATC GAGTGGCGCGCGTTCGC TTATTGACGACGCAG TERM 1600 1979857 - 1979824 - T 88 -17.5 -3.06515 | gap 1, opp_overlap 1979823 1979824 1979828, overlap 1979823 1979828 TTCGATCGCCAAAAT CCAACGCGCGCC-CTC ATC GAGTGGCGCGCGTTCG CTTATTGACGACGCA TERM 1601 1979824 - 1979857 + T 84 -17.5 -2.76696 | gap 1, opp_overlap 1979824 1979823 1979828, overlap 1979823 1979828 TTCGATCGCCAAAAT CCAACGCGCGCC-CTC ATC GAGTGGCGCGCGTTCG CTTATTGACGACGCA TERM 1602 1979828 - 1979853 + T 91 -16.9 -3.28745 | gap 1, opp_overlap 1979824 1979823 1979828, overlap 1979824 1979823 ATCGCCAAAATCCAA CGCGCGCC-CTC ATC GAGTGGCGCGCG TTCGCTTATTGACGA TERM 1603 1979853 - 1979828 - T 91 -16.9 -3.37091 | gap 1, opp_overlap 1979828 1979824 1979823, overlap 1979824 1979823 ATCGCCAAAATCCAA CGCGCGCC-CTC ATC GAGTGGCGCGCG TTCGCTTATTGACGA RPD_1764 1981025 - 1979859 - | threonine aldolase TERM 1604 1981225 - 1981206 - R 100 -16.4 -5.27938 | ATCGTCAAACAAAAA GGCCCCGG CGAA CCGGGGCC TCGATGCATCGAACT rpsD 1981870 - 1981253 - | 30S ribosomal protein S4 TERM 1605 1981982 - 1982025 + r 81 -12.3 -3.85698 | opp_overlap 1981976 1981973 1981988 1981990 1981993 1982007, overlap 1981993 GACGAACCACGGGTC GCGAAACACAACGCGGGCC GAAACA GGCCCGCGTTGTTGGCCGC TTTCTAGGGAGAAAC TERM 1606 1982019 - 1981988 - R 85 -15.9 -3.53444 | opp_overlap 1981982 1981993, overlap 1981976 1981973 1981990 1981993 1982007 CCACGGGTCGCGAAA CACAACGCGGGCC GAAACA GGCCCGCGTTGTT GGCCGCTTTCTAGGG TERM 1607 1982017 - 1981990 - R 93 -18.5 -3.34517 | opp_overlap 1981982 1981993, overlap 1981976 1981973 1981988 1981993 1982007 ACGGGTCGCGAAACA CAACGCGGGCC GAAACA GGCCCGCGTTG TTGGCCGCTTTCTAG TERM 1608 1981993 - 1982014 + r 85 -14.4 -3.64283 | opp_overlap 1981976 1981973 1981990 1981988 1981993 1982007, overlap 1981982 GGTCGCGAAACACAA CGCGGGCC GAAACA GGCCCGCG TTGTTGGCCGCTTTC TERM 1609 1982014 - 1981993 - R 88 -14.4 -3.81488 | opp_overlap 1981993 1981982, overlap 1981976 1981973 1981990 1981988 1982007 GGTCGCGAAACACAA CGCGGGCC GAAACA GGCCCGCG TTGTTGGCCGCTTTC RPD_1766 1982871 - 1982089 - | hypothetical protein RPD_1767 1983261 - 1982878 - | cupin 2, barrel RPD_1768 1984116 - 1983316 - | glutamate racemase RPD_1769 1985692 - 1984385 - | adenylosuccinate lyase TERM 1610 1985762 - 1985776 + H 73 -8.5 -3.98113 | GAGGCGAGTCGAACG GGCCG CTCTC CGGCC TTTCGTTCGTCATTC RPD_1770 1986230 - 1986562 + | hypothetical protein RPD_1771 1987211 - 1986513 - | ribulose-phosphate 3-epimerase RPD_1772 1987483 - 1988247 + | calcium-binding EF-hand RPD_1773 1989301 - 1988306 - | peptidase S58, DmpA TERM 1611 1988816 - 1988833 + g 75 -9.1 -4.14056 | gap 1 CGGCGTTTGCGCCGA GGCGGAGC CGA GC-CCGCC TTTGTAGTTTGCCGT RPD_1774 1989476 - 1990210 + | cytochrome c biogenesis protein, transmembrane region RPD_1775 1991546 - 1990434 - | extracellular ligand-binding receptor TERM 1612 1991664 - 1991702 + r 100 -22.5 -2.8547 | opp_overlap 1991656 1991655, overlap 1991661 CAAAATGCGCGGTTT GCCGCAGGGCTGTGGCA CATTC TGCCGCAGCCCTGCGGG TGTGCTGTCACACCT RPD_1776 1992444 - 1991710 - | ABC transporter related RPD_1777 1993280 - 1992441 - | ABC transporter related TERM 1613 1992551 - 1992589 + g 83 -14.7 -3.64703 | gap 1, overlap 1992580 GCGTGCCGTCGGCGA TCT-TGACGCCGTAGTCG AGCA CGACGACGGCGTCGGAGA TTTCCATCACCACGC RPD_1778 1994611 - 1993277 - | inner-membrane translocator TERM 1614 1993828 - 1993838 + g 72 -8.2 -4.07568 | opp_overlap 1993811 GAATTCCGAGCAGCG CGGC GAG GCCG TTTTCGCCGGGCACC TERM 1615 1994520 - 1994533 + g 79 -2.3 -5.03314 | opp_overlap 1994509 1994507 ACCAGCCCGACGAGG GCGCT GATC AGGGC TTTTTTGAAGATGAA TERM 1616 1994571 - 1994550 - G 70 -8.6 -3.92324 | TTTTTGAAGATGAAA CCGGCGCC GGCTTG GGCGGCGG CCTTCGACTCGGCGG RPD_1779 1995529 - 1994612 - | inner-membrane translocator TERM 1617 1995422 - 1995406 - G 73 -6.5 -4.30576 | opp_overlap 1995406, overlap 1995408 CGCCGATCATGAAAA TGTCGCC ATG GGCGAAA TTGATCATGCCGACG TERM 1618 1995585 - 1995567 - H 71 -13.2 -3.07236 | AAAGGGATTCGAATA TTGCACGC GCG GCGTGCAA CCGTCAGGGGCAACC RPD_1780 1996046 - 1996573 + | hypothetical protein RPD_1781 1996778 - 1997239 + | carbon monoxide dehydrogenase subunit G RPD_1782 1997401 - 1997898 + | (2Fe-2S)-binding RPD_1783 1997955 - 1998761 + | molybdopterin dehydrogenase, FAD-binding RPD_1784 1998809 - 1999717 + | ATPase RPD_1785 1999861 - 2001105 + | VWA containing CoxE-like RPD_1786 2001132 - 2001455 + | hypothetical protein RPD_1787 2001493 - 2002194 + | xanthine dehydrogenase accessory factor TERM 1619 2002641 - 2002622 - g 79 -10.6 -3.90112 | CGGCGTCGAAGGAAA GCTCCGCG ACGC CGCGGTGC TGGCCGCGCAAGGCG TERM 1620 2003741 - 2003697 - g 74 -12.8 -3.57462 | gap 1, opp_overlap 2003697 2003701 CATCTGATCGCCAAA CACGGCGAGGCCGT-GACCGA AGTG CCAGTCGACGGCCACGCTGCG TTTCTCGACATCGAC TERM 1621 2003697 - 2003741 + G 74 -9.9 -3.87815 | gap 1, opp_overlap 2003697, overlap 2003701 CATCTGATCGCCAAA CACGGCGAGGCCGT-GACCG AAGTGC CAGTCGACGGCCACGCTGCG TTTCTCGACATCGAC RPD_1788 2002191 - 2003792 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 1622 2003940 - 2003956 + G 75 -9.3 -4.067 | overlap 2003945 GCTTTCGTCGGCTGC GCGCTGC GGC GCTGCGC TTCTTGTTGCTTTGA RPD_1789 2003920 - 2004297 + | hypothetical protein RPD_1790 2004624 - 2004439 - | hypothetical protein RPD_1791 2004772 - 2005512 + | regulatory protein, TetR TERM 1623 2005516 - 2005504 - f 74 -5.5 -4.45544 | TTCGACGAAGGAAAA GCGAC ATG ATCGC GCGCCCGATCCAAGC RPD_1792 2005509 - 2006309 + | putative efflux protein RPD_1793 2006306 - 2007247 + | ABC transporter related RPD_1794 2007244 - 2008416 + | hypothetical protein RPD_1795 2008445 - 2009767 + | adenylyl cyclase class-3/4/guanylyl cyclase RPD_1796 2010537 - 2009824 - | hypothetical protein TERM 1624 2010895 - 2010937 + r 100 -29.4 -3.60151 | opp_overlap 2010903 GGTCTTTGCTGTTGT CCAGAGCAGGATGACGCGTC TTC GACTCGTCATCCTGCTCTGG TTCTCGTTTGAGCAC TERM 1625 2010929 - 2010903 - R 77 -15.2 -2.62184 | opp_overlap 2010895 CTGTTGTCCAGAGCA GGATGACGCGTC TTC GACTCGTCATCC TGCTCTGGTTCTCGT RPD_1797 2011264 - 2011025 - | hypothetical protein RPD_1798 2011844 - 2011383 - | hypothetical protein TERM 1626 2011601 - 2011628 + g 79 -13.4 -3.70902 | gap 1, opp_overlap 2011603 GCAGGGTGTCGAACC GACCGCCGCG-CG CGG CGACGCGGCCGTC TTTCGGTGTGCCGAG RPD_1799 2012676 - 2011873 - | hypothetical protein RPD_1800 2013010 - 2014143 + | dolichyl-phosphate beta-D-mannosyltransferase TERM 1627 2014984 - 2015011 + G 77 -14.2 -3.38046 | overlap 2014934 2014983 CGCGCGCGTGCTGAT CAGCGCGATCGT CTGG ACCATCGCGCTG TATTTCGCCTGGCAG RPD_1801 2014151 - 2015644 + | glycosyl transferase family protein TERM 1628 2015647 - 2015661 + F 71 -12.8 -2.99871 | opp_overlap 2015646, overlap 2015643 TCCGGTCTATTGAAG CCGGCC CGC GGCCGG TACTTTAGTCTAAAC RPD_1802 2015783 - 2017000 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPD_1803 2018008 - 2017019 - | hypothetical protein TERM 1629 2017308 - 2017276 - G 72 -14.8 -2.71263 | gap 1 AACGGCCGGGAACCA GCGCCGCGGCG-CCG GCCC CGGTCGCAGCAGCGC CCGCCGCGTCGACAC RPD_1804 2018818 - 2018072 - | hypothetical protein TERM 1630 2018165 - 2018120 - G 74 -10.4 -3.86015 | gap 1, overlap 2018131 GACGGGCGCGAGAAA CGACG-CGAAGACGTAGCCGT CGAGC ACGCCGTCGCCTTCGACGTCG ACGCACGCCCATGCC TERM 1631 2018995 - 2018980 - R 71 -4.7 -4.4595 | opp_overlap 2018980 TCAGAAAATCGAAAA TCAGC CTATGT GCTGA TCGTCTCGTAAGCTG TERM 1632 2019163 - 2019173 + r 88 -8.2 -4.67563 | ATCTACACCTCAAGC CGGC GTC GCCG TTTTGGTTTGTGTTG RPD_1805 2020161 - 2019205 - | PfkB RPD_1806 2020517 - 2021407 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1633 2021416 - 2021448 + T 71 -12.8 -3.03441 | gap 2, opp_overlap 2021440 GACGTAGCAGGCGTC GCGGCGC-GTC-TGCG GCC TGCAAGACCGCGCCGC TCTTGCGGCGTGCTA RPD_1807 2022678 - 2021461 - | cytochrome P450 TERM 1634 2022459 - 2022472 + g 71 -9.5 -3.7941 | AGTCGCCGTATTTCG GCGCG AACT CGCGC TTCTTGTCGGAGCTG TERM 1635 2023123 - 2023107 - g 70 -10.1 -3.72893 | opp_overlap 2023106 2023105 CATTTTCCGAGCAAA TCGGCGC TTT ACGCCGA GATTCTGGCGGACGA RPD_1808 2022945 - 2023646 + | TetR family transcriptional regulator TERM 1636 2023687 - 2023667 - g 72 -4.5 -4.53303 | overlap 2023668 2023669 GATTGCGACAGAAAA CCCGTCCGC CGC GCGGTCGAC CCCCGAAAAGCCGCG TERM 1637 2023854 - 2023833 - g 77 -7.1 -4.44667 | TTCGCCAACAACAAA CCGCCGCCG ATTA CGGTGTCGG TCGCCGAGGCGAACG RPD_1809 2023647 - 2024840 + | secretion protein HlyD TERM 1638 2026378 - 2026403 + G 73 -11.1 -3.65046 | gap 1, overlap 2026377 2026385 GTTCGCCTTCACGCT CGCCGG-CGCGG TGA TCGTGTCCGGCG TTGTTGCGCTGACGC TERM 1639 2027874 - 2027902 + G 73 -12.4 -3.35996 | gap 1, overlap 2027890 TGCTGCCGCTGCTCA CCGCCTCG-GGCG CGGG CGCCGCGAGCCGG TTCTCGATCGGCCTC RPD_1810 2024981 - 2028085 + | acriflavin resistance protein RPD_1811 2029186 - 2028212 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like RPD_1812 2030169 - 2029183 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like RPD_1813 2031145 - 2030186 - | binding-protein-dependent transport systems inner membrane component RPD_1814 2032137 - 2031157 - | binding-protein-dependent transport systems inner membrane component RPD_1815 2033771 - 2032173 - | extracellular solute-binding protein TERM 1640 2033720 - 2033752 + g 100 -13.3 -4.64676 | opp_overlap 2033731 CGGGAGTGGCGAGGG CGAGGATGCAAGCGG CGG CCGCATGCAACCCCG TTTTGTTCAAAATCG TERM 1641 2034253 - 2034284 + G 70 -10 -3.72576 | gap 1 GCGTCGTCACCGGAG GGC-GCGGCACGCAC CGC GCGCGCGTCGCTGCC TTTGATCCGGCAGAG RPD_1816 2033941 - 2035194 + | D-amino-acid dehydrogenase TERM 1642 2035449 - 2035468 + G 83 -4.8 -5.0538 | overlap 2035451 TCGAGATCGATTGCA CCCCCGAG GAAG CACGGGCG TTTTTTGGCCTGCCG RPD_1817 2035421 - 2035675 + | hypothetical protein TERM 1643 2036200 - 2036176 - g 89 -11.3 -4.25283 | overlap 2036155 ACGGGTCTATGAAAA GCTGTCGGGCG AAC CGCTCGACGGC GTCCGGCTCGATGAT RPD_1818 2035694 - 2036482 + | hypothetical protein TERM 1644 2037076 - 2037038 - g 88 -16.6 -3.71848 | CGCCTTCATGAAGAA GCCGCTGCCGCGTCAGCC GGA GGCCGATGCGGCCGCAAC CACCACCGCGGGCCT RPD_1819 2036496 - 2037491 + | alpha/beta hydrolase fold TERM 1645 2040100 - 2040143 + G 75 -13.9 -3.28712 | gap 2 GAAGCTGCAAGCGCT CGCCGGCGGCGATGGCGCTGC CGAC GAGGC-CTATCGC-GCCGGCG TTCTGGCGAAGCGCA RPD_1820 2037686 - 2040913 + | cytochrome P450 RPD_1821 2040933 - 2041271 + | hypothetical protein RPD_1822 2041523 - 2042002 + | phasin 2 TERM 1646 2042048 - 2042067 + T 100 -16.4 -4.85782 | opp_overlap 2042045 2042044 TGATCAATGAATCCT CGGCCCGC GCAA GCGGGCCG TTTCTTTTTGGGCAC TERM 1647 2042160 - 2042192 + T 81 -13.4 -3.61894 | gap 2, overlap 2042162 2042179 GACGGTTTTTGCTAA GCCCGTCGCGCCACGG CCG CCG-GGCGCG-CGGTC TTCTTGCGCGCGGTT TERM 1648 2042162 - 2042190 + T 82 -14.6 -3.38812 | gap 2, overlap 2042160 2042179 CGGTTTTTGCTAAGC CCGTCGCGCCACGG CCG CCG-GGCGCG-CGG TCTTCTTGCGCGCGG TERM 1649 2042179 - 2042205 + T 72 -7.8 -4.13945 | overlap 2042162 2042160 GTCGCGCCACGGCCG CCGGGCGCGCGG TCT TCTTGCGCGCGG TTTTGGCGTCGCCCT RPD_1823 2042824 - 2042156 - | TetR family transcriptional regulator RPD_1824 2042952 - 2043935 + | phenylacetate-CoA oxygenase subunit PaaA RPD_1825 2043966 - 2044253 + | phenylacetate-CoA oxygenase subunit PaaB TERM 1650 2044228 - 2044246 + F 77 -14.6 -2.94416 | CGACCTTTTACGAGG TGCCCGAC GAA GTCGGGCA TATGTAGTCCACGTC RPD_1826 2044367 - 2045143 + | phenylacetate-CoA oxygenase, PaaI subunit RPD_1827 2045140 - 2045640 + | phenylacetate-CoA oxygenase, PaaJ subunit RPD_1828 2045657 - 2046745 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit TERM 1651 2046762 - 2046797 + T 77 -14.8 -2.87132 | gap 1 AGTCCAAGTTCGTCA TTCCGGG-GCGTGCAGC GAA GCTGCATGAACCCGGAA TCTCTGAAACAAGCG RPD_1829 2048368 - 2047034 - | phenylacetate-CoA ligase RPD_1830 2048835 - 2048383 - | phenylacetic acid degradation protein PaaD RPD_1831 2049623 - 2048838 - | enoyl-CoA hydratase TERM 1652 2049213 - 2049186 - G 74 -9.8 -3.87373 | opp_overlap 2049203 CAGACGCGGCAGAAA CCAGGTGCCG CCGGAATC CGGCACCAGG CCGATCTTGGCGAAT TERM 1653 2050776 - 2050738 - g 73 -10.8 -3.66178 | overlap 2050739 GCGCTGAAGGCGAAA CTCGCCGAGGTGCGGCTC GGC GATCCGCGCCACGACGAC AAGGCGATGGGGCCG TERM 1654 2050836 - 2050779 - g 70 -11.8 -3.44051 | gap 1 GCGCCACGACGACAA GGCGATGGGGCCGCTGGTCA-GCCGCG ATCAG CGCGACGCGGTCCGCGTCGCCATCGCC GCGCTCTCGACCGAG RPD_1832 2049781 - 2051817 + | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase RPD_1833 2052318 - 2051953 - | hypothetical protein RPD_1834 2053429 - 2052464 - | fatty acid desaturase RPD_1835 2054701 - 2053478 - | OsmC-like protein RPD_1836 2056001 - 2054802 - | cytochrome P450 RPD_1837 2056306 - 2056097 - | putative ferredoxin RPD_1838 2057872 - 2056439 - | amidase TERM 1655 2057154 - 2057126 - G 77 -10.9 -3.85698 | CGCGGCGGCGAGAAA CGATGTCGCCGGC GAG GGCAGCGACAGCG GATCTGCGGCGTGCT TERM 1656 2057543 - 2057575 + g 73 -9.2 -3.91897 | gap 1 GGCTTCGAGCTGTTC GACCATGAGGTCGGA GCGG TCCGGCA-CATGGTC TTTGTAGATCGGCGA RPD_1839 2058007 - 2059119 + | ABC transporter-like TERM 1657 2059132 - 2059173 + T 77 -13 -3.55444 | gap 1, opp_overlap 2059091 2059136 2059137, overlap 2059133 TGATCGAGCGGCGCG ACAAT-CGACGGCGACGCG CCTGA CGCGCCGCCGTCGCGTTGC TTTACGCGGTCGCGC TERM 1658 2059133 - 2059172 + T 81 -16.5 -2.73124 | gap 1, opp_overlap 2059091 2059136 2059137, overlap 2059132 GATCGAGCGGCGCGA CAAT-CGACGGCGACGCG CCTGA CGCGCCGCCGTCGCGTTG CTTTACGCGGTCGCG TERM 1659 2059168 - 2059136 - T 93 -19.1 -3.29144 | opp_overlap 2059133 2059132, overlap 2059091 2059137 CGAGCGGCGCGACAA TCGACGGCGACGCGC CTG ACGCGCCGCCGTCGC GTTGCTTTACGCGGT TERM 1660 2059167 - 2059137 - T 100 -22.6 -2.57344 | opp_overlap 2059133 2059132, overlap 2059091 2059136 GAGCGGCGCGACAAT CGACGGCGACGCGC CTG ACGCGCCGCCGTCG CGTTGCTTTACGCGG RPD_1840 2060551 - 2059175 - | Beta-glucosidase TERM 1661 2059412 - 2059445 + g 80 -9 -4.29325 | gap 3, opp_overlap 2059403 CAGGAAGGCGACGCG GCCGCGATCGATCACCG CGC CGGTG-TCG-TC-CGGC TTTTCGATGTTGCTG RPD_1841 2060790 - 2061917 + | tartrate dehydrogenase RPD_1842 2062855 - 2061986 - | hypothetical protein RPD_1843 2063903 - 2062989 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding RPD_1844 2065179 - 2063932 - | allantoate amidohydrolase RPD_1845 2066196 - 2065249 - | LysR family transcriptional regulator TERM 1662 2065535 - 2065570 + g 72 -11.8 -3.61398 | gap 1 ACGGTGCCGAGCGAC GCCGAAGCGTGCAGCCG GAT CGGCGGCA-GTTCCGGC TTGTTGAACAGCGAG RPD_1846 2066314 - 2067132 + | hypothetical protein TERM 1663 2067127 - 2067114 - f 71 -8.1 -3.96068 | CGACTTGAAGAACAA GCACC TTGC GGTGC TCTGAGGCCAACTGA RPD_1847 2067189 - 2068439 + | twin-arginine translocation pathway signal TERM 1664 2068490 - 2068446 - f 76 -12.8 -3.51032 | gap 1 ATGCCGTAACGACAA GCTCATCCCGAGGCCCGCCGC AATT GCGGTGGGCCTCGA-AGGATC GGGCGCAACACGATG TERM 1665 2069349 - 2069396 + G 71 -12.6 -3.32233 | gap 1, overlap 2069347 2069345 TTGTCGAGGCGACCA CCGCGCTGATGCTG-CCGCCATC GCT GAAGTCGGTCGGCATCTACGCGG TCTATTTGCTCGTTG RPD_1848 2068571 - 2069449 + | inner-membrane translocator RPD_1849 2069449 - 2070435 + | inner-membrane translocator RPD_1850 2070432 - 2071166 + | ABC transporter related RPD_1851 2071150 - 2071854 + | ABC transporter related RPD_1853 2072957 - 2072295 - | putative aldolase RPD_1854 2073048 - 2073962 + | 3-hydroxyisobutyrate dehydrogenase RPD_1855 2073983 - 2074765 + | hydroxypyruvate isomerase TERM 1666 2075083 - 2075114 + G 75 -9.3 -4.07568 | GCGCTGCGCGCCGAT GCCGGCGACGCGA TGGTGC TGGTGACGCCGGC TTTTCCGGAGACCGG TERM 1667 2075922 - 2075970 + G 71 -12.4 -3.28497 | overlap 2075904 2075908 2075917 GCCGGAAATCGCGGC CGGTGTTCCGGTTCTGCGTGCG GTCGG CGCCTGCAGAAGCGGGATGCTG TTGGCTTTGAAGTCA TERM 1668 2075995 - 2076005 + G 79 -2.4 -5.02074 | AAGTCAGGAAATTTC GGCG GTC CGCG TTTTTTCACGGATGC RPD_1856 2074762 - 2076039 + | type III effector Hrp-dependent outers RPD_1857 2076248 - 2077939 + | chemotaxis sensory transducer RPD_1858 2079634 - 2078123 - | acetyl-CoA acetyltransferase RPD_1859 2080898 - 2079765 - | 2-nitropropane dioxygenase, NPD TERM 1669 2082081 - 2082045 - g 82 -11.6 -4.07568 | gap 1, overlap 2082046 TCTCGCGTTGGAAAA GGCCGCGAACGACACCG CAGC CGATTTCGTCCGCG-CC AAGATCGCCGAGATC TERM 1670 2082403 - 2082385 - g 70 -5.9 -4.27584 | opp_overlap 2082384, overlap 2082397 ACCCTCAACGCAAAA TGGGCGG AAGGA CCGCGCA CCTTTCTCGGCCTGA RPD_1860 2081149 - 2082813 + | FAD dependent oxidoreductase RPD_1861 2083764 - 2082943 - | short-chain dehydrogenase/reductase SDR TERM 1671 2084671 - 2084661 - g 72 -8.2 -4.07568 | CGCGTTTCTCGAAAA GCGC CCC GCGC AGTTCAAGGGCAAAT RPD_1862 2083888 - 2084688 + | enoyl-CoA hydratase TERM 1672 2084702 - 2084689 - f 73 -8.1 -3.96618 | overlap 2084697 TTCAAGGGCAAATAA GCGGA AATG TCCGC AGCCTTCGAGGATGC RPD_1863 2084695 - 2085684 + | aminoglycoside phosphotransferase RPD_1864 2085755 - 2086129 + | hypothetical protein RPD_1865 2087037 - 2086258 - | enoyl-CoA hydratase TERM 1673 2087032 - 2087042 + g 72 -4.6 -4.46531 | GGTGGAGAACTGCAG CGCC ATC GGTG TTTCCTTTTTTCGTT TERM 1674 2087377 - 2087364 - g 70 -2.3 -4.62069 | opp_overlap 2087374 2087376, overlap 2087365 GCGCCAGGCGAAAAA CCTCG CCGA CGACG CCGGGCATCTGCGTT TERM 1675 2087793 - 2087803 + G 70 -2.4 -4.60258 | opp_overlap 2087787, overlap 2087787 CGGCAATGACGGCGA CGCC CGC GGCA TTTCTTGTTTCCTGG RPD_1866 2087092 - 2088438 + | acyl-CoA dehydrogenase-like TERM 1676 2088558 - 2088514 - T 100 -20.1 -3.60419 | ATTCTCAAACGAGAA CCTGGAGCAGGATGACGGTTC GGA GATAAGTCATCCTGCTCCAGG GGAGAATTCAACGTC RPD_1867 2090761 - 2088617 - | chemotaxis sensory transducer TERM 1677 2089046 - 2089023 - G 83 -12.4 -4.15565 | gap 1, opp_overlap 2089023 GCCACCACCGCAAAA CCACGGCCGGC TTC GCCGGC-GCGG GCCGCCTCGATGGTT TERM 1678 2090072 - 2090104 + g 70 -10.5 -3.74872 | overlap 2090077 GCCCGCTCGGCCGTT GACCACGGCGTCGTG AAG CGCGACGATGTTGTC TTTCATCCGGTCGCT TERM 1679 2090129 - 2090153 + g 73 -12.2 -3.4252 | GTCGCTGGTATCGAG CAGCATAGCG AGAGG CGCTGTGCTG TTCTCGTAGATCGAC TERM 1680 2090954 - 2090923 - R 100 -24.6 -3.24747 | opp_overlap 2090911 2090923 TTCGCATAGCATTAA GGCCCGTCCTCGTA TCGC TACGAGGACGGGCC TTCTAGGGCTTAGAC TERM 1681 2090923 - 2090954 + r 100 -24.6 -3.33261 | opp_overlap 2090923, overlap 2090911 TTCGCATAGCATTAA GGCCCGTCCTCGTA TCGC TACGAGGACGGGCC TTCTAGGGCTTAGAC RPD_1868 2092744 - 2091167 - | acyl-CoA synthetase RPD_1869 2093842 - 2092970 - | short-chain dehydrogenase/reductase SDR TERM 1682 2094595 - 2094541 - g 74 -7.7 -4.25104 | gap 1 GCCTCGCCACGAAAA TCGTCGACGATCCGC-GCGCCGCCGC GCTG GAGATGGCGCTGGAGATCGCCGGCAA GAGCCCGGACGCGAT RPD_1870 2093958 - 2094770 + | enoyl-CoA hydratase TERM 1683 2094806 - 2094824 + TF 77 -13.1 -3.66844 | ACTTGACGACGAGGA GCCGCGC GCACA GCGCGGC TTCTTCGAGTATAAG TERM 1684 2095070 - 2095108 + GT 70 -6 -4.20516 | gap 1, overlap 2095058 CTTGGCGTCAAACCC GGCGATTGCGTTTGCGT CTTGAT GCGC-AACGACATCGCC TTTCTTGAATCCGCC TERM 1685 2095930 - 2095967 + GT 78 -11.8 -3.71284 | opp_overlap 2095930 2095950 GGATGCGCTGAAGAA GCCCGGCACCGTCGGC AAGATC GCTGCCGGCGCCGAGC TTGTGTTCGTCGACG TERM 1686 2095967 - 2095930 - gT 85 -14.7 -3.62046 | opp_overlap 2095930, overlap 2095950 GGATGCGCTGAAGAA GCCCGGCACCGTCGGCA AGAT CGCTGCCGGCGCCGAGC TTGTGTTCGTCGACG RPD_1872 2099252 - 2096442 - | sensor histidine kinase RPD_1871 2094920 - 2096494 + | acyl-CoA synthetase TERM 1687 2096776 - 2096755 - GT 82 -12.3 -3.92324 | opp_overlap 2096754 2096753 TCGGTGAACAGCAAA TCGAACGCG GCGC CGCGCTCGA CCTCTTTCAGAGCCG TERM 1688 2098045 - 2098063 + gT 100 -13.8 -4.37092 | overlap 2098046 TCGAAAATCTCCTTC TCGCGGCG GAT CGCCGCGG TTTTGTCACGCGAAT TERM 1689 2098046 - 2098062 + gT 83 -15.1 -3.21934 | overlap 2098045 CGAAAATCTCCTTCT CGCGGCG GAT CGCCGCG GTTTTGTCACGCGAA RPD_1873 2100276 - 2099395 - | LysR family transcriptional regulator RPD_1874 2101331 - 2100273 - | hypothetical protein TERM 1690 2100565 - 2100510 - G 79 -11.9 -3.88291 | gap 3, overlap 2100522 GATCATCGCCACAAA GCCGAGCACGAACCACGGCATCGGCGGC GCC GCCGCCGTTGCGGTGG--CATGGT-GGC GAATGCGGGCGCGCG TERM 1691 2100556 - 2100522 - G 100 -21.4 -3.22491 | overlap 2100510 AAAGCCGAGCACGAA CCACGGCATCGGCGGC GCC GCCGCCGTTGCGGTGG CATGGTGGCGAATGC RPD_1875 2101568 - 2102428 + | hypothetical protein TERM 1692 2104392 - 2104420 + G 74 -14.5 -3.05384 | GAGCACCATGGCGTT CGGCTGCGGCTGT TCC ACGGCCGCGGCGG TTCGGTCGGCCGCGG RPD_1876 2102526 - 2105327 + | phosphoenolpyruvate carboxylase TERM 1693 2106319 - 2106298 - g 73 -12.9 -3.29144 | GGACGCGGTGGAGAA GGCGGCTGC GGAT GCGGCCGCC AGGGAAGCCGCTGCC RPD_1877 2105639 - 2106943 + | OmpA/MotB TERM 1694 2107040 - 2106989 - T 84 -16 -3.05463 | gap 1, opp_overlap 2106993 2107022, overlap 2106993 2106997 2107001 ATTGCGGCGACTGAA GCGACGAAGCAATCCAGAG-TGCGG ATT CGGCATCCCTGGATTGCTTCGTTTC GCTCGCAATGATGCA TERM 1695 2107036 - 2106993 - T 90 -19.8 -2.54896 | gap 1, opp_overlap 2106993 2107022, overlap 2106989 2106997 2107001 CGGCGACTGAAGCGA CGAAGCAATCCAGAG-TGCGG ATT CGGCATCCCTGGATTGCTTCG TTTCGCTCGCAATGA TERM 1696 2106993 - 2107036 + T 100 -17.6 -3.65351 | gap 1, opp_overlap 2106993 2106989 2106997 2107001, overlap 2107022 CGGCGACTGAAGCGA CGAAGCAATCCAGAG-TGCGG ATT CGGCATCCCTGGATTGCTTCG TTTCGCTCGCAATGA TERM 1697 2107032 - 2106997 - T 76 -13.4 -3.22388 | gap 1, opp_overlap 2106993 2107022, overlap 2106993 2106989 2107001 GACTGAAGCGACGAA GCAATCCAGAG-TGCGG ATT CGGCATCCCTGGATTGC TTCGTTTCGCTCGCA RPD_1878 2108013 - 2107099 - | short-chain dehydrogenase/reductase SDR TERM 1698 2108136 - 2108103 - R 88 -17.5 -3.09273 | gap 1, opp_overlap 2108097 2108097 TGTGGCGAAGAGAGA TTCCGGGTTCGCGAGC TAC GCTCGCGC-CCCGGAA TGACGACTTACTACT RPD_1879 2109286 - 2108147 - | putative lipid transfer protein RPD_1880 2109705 - 2109292 - | hypothetical protein TERM 1699 2110449 - 2110479 + G 71 -12.5 -3.23216 | gap 1, opp_overlap 2110429, overlap 2110456 GGCGGAGGCCGATGC GCCCGCAGTGGCGC GGCT GCGCCGC-GCCGGC TTCGTGGTGATCGGC RPD_1881 2110090 - 2111481 + | amidase TERM 1700 2111570 - 2111526 - g 71 -14.8 -2.55015 | overlap 2111522 AGCGCAGCCAACTCA CGCTGCCGATCCGGCAGGCG GTGAT CGCCGGCTGGACCGGTCGCG ATCCGGTGGCGCGCG RPD_1882 2111474 - 2112160 + | hypothetical protein TERM 1701 2112163 - 2112218 + T 95 -16.8 -3.93369 | gap 1, opp_overlap 2112167 2112168, overlap 2112164 GATTCTGGGATGAGA GGAAG-CCGTCATTCCGAGGCGCGAGC TCA GCTCGCGCCCCGGAATGACGAACGACA TTTGATTCCGATTGG TERM 1702 2112164 - 2112217 + T 93 -20.3 -2.95539 | gap 1, opp_overlap 2112167 2112168, overlap 2112163 ATTCTGGGATGAGAG GAAG-CCGTCATTCCGAGGCGCGAGC TCA GCTCGCGCCCCGGAATGACGAACGAC ATTTGATTCCGATTG TERM 1703 2112213 - 2112167 - T 100 -29.6 -3.29471 | opp_overlap 2112164 2112163, overlap 2112168 CTGGGATGAGAGGAA GCCGTCATTCCGAGGCGCGAGC TCA GCTCGCGCCCCGGAATGACGAA CGACATTTGATTCCG TERM 1704 2112212 - 2112168 - T 100 -33.1 -2.57468 | opp_overlap 2112164 2112163, overlap 2112167 TGGGATGAGAGGAAG CCGTCATTCCGAGGCGCGAGC TCA GCTCGCGCCCCGGAATGACGA ACGACATTTGATTCC RPD_1883 2112726 - 2112250 - | phenylacetic acid degradation-related protein TERM 1705 2112862 - 2112804 - R 82 -14.3 -3.32844 | gap 5, overlap 2112807 2112808 CCCGCGATCGCACAA CAATCGTCACGTCATTCCGGGTCCGCGAGC TTTC GCTCGCG--CCCGGAATGACGTG-C-AT-G AGGGGTGGCCTGCAT TERM 1706 2112863 - 2112807 - R 100 -20.5 -3.80733 | gap 3, overlap 2112804 2112808 GCGATCGCACAACAA TCGT-CACGTCATTCCGGGTCCGCGAGC TTTC GCTCGCG--CCCGGAATGACGTGCATGA GGGGTGGCCTGCATG TERM 1707 2112860 - 2112808 - R 93 -20.9 -2.88118 | gap 3, overlap 2112804 2112807 CGATCGCACAACAAT CGTCACGTCATTCCGGGTCCGCGAGC TTTC GCTCGCG--CCCGGAATGACGTG-CA TGAGGGGTGGCCTGC RPD_1884 2114059 - 2112887 - | 4-hydroxybenzoate 3-monooxygenase RPD_1885 2114250 - 2115275 + | TRAP dicarboxylate transporter- DctP subunit TERM 1708 2115568 - 2115546 - f 82 -14.9 -3.29096 | CGCAGCAACGACTAA CCCTCTCCC CTCGT GGGAGAGGG TGGCGAGCGAAGCTC RPD_1886 2115856 - 2116662 + | enoyl-CoA hydratase TERM 1709 2118517 - 2118460 - g 70 -11.9 -3.3785 | gap 1, overlap 2118453 2118494 CGAAGTGACCGACAA GGGGTCGGTCAATCAGCGCGCGGTGCTG GAG CAACGCGCCGCGCTGATCGGC-GACCTC TACGCCGTGCCGCCG RPD_1887 2116664 - 2118571 + | feruloyl-CoA synthase RPD_1888 2118722 - 2119141 + | thioesterase superfamily protein RPD_1889 2119225 - 2120382 + | extracellular ligand-binding receptor TERM 1710 2120435 - 2120405 - T 81 -16.3 -2.79276 | gap 1, opp_overlap 2120407 2120410, overlap 2120402 2120410 ATCACCGACGAACGA TG-CAATGGCCGGG GAAA CCCGGCCATTGTCA TATCCGCAGTTGTGC TERM 1711 2120407 - 2120432 + T 87 -19.1 -2.62933 | opp_overlap 2120405 2120402 2120410, overlap 2120410 CACCGACGAACGATG CAATGGCCGGG GAAA CCCGGCCATTG TCATATCCGCAGTTG TERM 1712 2120429 - 2120410 - T 80 -15 -3.14136 | opp_overlap 2120407 2120410, overlap 2120405 2120402 CGACGAACGATGCAA TGGCCGGG GAAA CCCGGCCA TTGTCATATCCGCAG TERM 1713 2120410 - 2120429 + T 83 -15 -3.46602 | opp_overlap 2120410 2120405 2120402, overlap 2120407 CGACGAACGATGCAA TGGCCGGG GAAA CCCGGCCA TTGTCATATCCGCAG RPD_1890 2121201 - 2120482 - | ABC transporter related RPD_1891 2122967 - 2121198 - | ABC transporter related TERM 1714 2121380 - 2121399 + g 89 -10.7 -4.2349 | overlap 2121358 CGCGGAGCTGACGCA GCAGCGC GGCGAG GCGCTGC TTTTCCATGTGGCGC RPD_1892 2124013 - 2122973 - | inner-membrane translocator TERM 1715 2124621 - 2124601 - g 81 -11.1 -4.15222 | opp_overlap 2124604 ATGCGGGCCAAGAAA CTGGTGGCG ACC CGCCACGAG GCGCGACTTAGTGAA RPD_1893 2124184 - 2124702 + | regulatory protein, MarR TERM 1716 2126617 - 2126659 + G 82 -12.6 -3.91911 | overlap 2126618 GCTTCGAAGTGCTGG GGCGCTGGCGTCATCCGAAC CGC GGTCTGGTGATGCCGGCGCG TTTCATTGCGCTCGC TERM 1717 2126618 - 2126658 + G 79 -16.1 -2.94825 | overlap 2126617 CTTCGAAGTGCTGGG GCGCTGGCGTCATCCGAAC CGC GGTCTGGTGATGCCGGCGC GTTTCATTGCGCTCG RPD_1894 2124876 - 2127281 + | GGDEF domain-containing protein RPD_1895 2129026 - 2127302 - | sodium/hydrogen exchanger TERM 1718 2129269 - 2129293 + G 77 -15.7 -3.03771 | overlap 2129251 2129255 GGAGCCGCTGAACGT GGCCGGCTCAT TTT ATGTGCCGGCC TATTCCAGCGTGTCG RPD_1896 2129075 - 2129659 + | hypothetical protein RPD_1897 2131133 - 2129817 - | hydroxypyruvate reductase TERM 1719 2130004 - 2130062 + g 93 -19.6 -2.62792 | gap 3, overlap 2130005 GCGGGATCGGTGGCG TTGCCGG-CGCCGCCGTCG-GCGCCGTCG GTGT CGGCGGCGAGCG-CGGCGACGTCCGGCAG ATCTTTGAGATGCAT RPD_1898 2132544 - 2131309 - | extracellular ligand-binding receptor TERM 1720 2131450 - 2131488 + g 83 -13.9 -3.77206 | CTTGATGCCCGGCAG CAGCCCGCCGAGCTGAA TGTCC TTCAGGTTGGCGGCCTG TTTCATCACGTTCTC RPD_1899 2134159 - 2132717 - | phage SPO1 DNA polymerase-related protein TERM 1721 2134191 - 2134249 + r 89 -13 -4.20368 | overlap 2134192 2134194 TCTCCCTTAAATCTG TTAGTTCGTCACCCTGAGGCGCCGTCGC GCA GCGACGGCCTCGAAGGATGACGACCTCG TTTGTATTAGAATCC TERM 1722 2134192 - 2134248 + r 80 -14.3 -3.11738 | overlap 2134191 2134194 CTCCCTTAAATCTGT TAGTTCGTCACCCTGAGGCGCCGTCGC GCA GCGACGGCCTCGAAGGATGACGACCTC GTTTGTATTAGAATC TERM 1723 2134194 - 2134246 + r 89 -16.9 -3.11182 | overlap 2134192 2134191 CCCTTAAATCTGTTA GTTCGTCACCCTGAGGCGCCGTCGC GCA GCGACGGCCTCGAAGGATGACGACC TCGTTTGTATTAGAA RPD_1900 2135494 - 2134256 - | radical SAM family protein TERM 1724 2135677 - 2135652 - H 72 -3.9 -4.67011 | gap 1, overlap 2135655 2135656 2135667 AACGGCAGTCAAAAA GGAGCGGCGC ATGAACG GCG-CGCGCC AAGACACGCTTGCGC RPD_1901 2135662 - 2136450 + | hypothetical protein RPD_1902 2136500 - 2137936 + | hypothetical protein TERM 1725 2141238 - 2141272 + G 88 -9.8 -4.42238 | overlap 2141239 CAGCGCATCCGCCAC CCCCGAGACGTCCGCA TCC TGCCGCCGTCGCGGGA TTTTCATTGAAGTAC TERM 1726 2141239 - 2141271 + G 73 -13.3 -3.2486 | overlap 2141238 AGCGCATCCGCCACC CCCGAGACGTCCGCA TCC TGCCGCCGTCGCGGG ATTTTCATTGAAGTA dnaE2 2137950 - 2141282 + | error-prone DNA polymerase TERM 1727 2141962 - 2142020 + G 73 -13.1 -3.31144 | CGTCGTCGCGCTGAT GCGGTCGCGTGAGGAGTG-GCAGGCGCTG CCG CAG-GCCTCCGCGCTCGACGCGCTACCGC TTGTGGAGATCACAA RPD_1904 2141372 - 2142868 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1728 2142887 - 2142901 + F 83 -9.2 -4.31433 | GAGGGGCATCCAGCA CTGCCG GCA CGGCGG TTTGTTGTGCGACTC TERM 1729 2143163 - 2143183 + F 100 -9.7 -5.09204 | CGTTGCAACATTGAT GCGAGTTCA GGT TGATCTCGC TTTTTGTTGGCGTGT RPD_1905 2143493 - 2143633 + | hypothetical protein RPD_1906 2143823 - 2144143 + | hypothetical protein RPD_1907 2145769 - 2144351 - | Type I secretion outer membrane protein, TolC RPD_1908 2146751 - 2145972 - | enoyl-CoA hydratase/isomerase RPD_1909 2147534 - 2146839 - | hypothetical protein RPD_1910 2147776 - 2148351 + | RNA polymerase sigma factor RPD_1911 2148354 - 2148992 + | hypothetical protein RPD_1912 2149167 - 2149337 + | hypothetical protein TERM 1730 2149359 - 2149322 - T 78 -10.5 -3.9712 | gap 1, opp_overlap 2149323 2149326 CGACCTCACCAGAAA GCGCGGCTGCCGGTAACG TCG CGTTCGC-TCAGCCGCGC AATATCGGCACCCTC RPD_1913 2150505 - 2149390 - | hypothetical protein RPD_1914 2151688 - 2150543 - | GGDEF domain-containing protein RPD_1915 2152101 - 2152670 + | RNA polymerase sigma factor TERM 1731 2152976 - 2152990 + G 85 -5.6 -5.0133 | GGGCAGGGGTTCGGC GCGCGT TTC ACGGGC TTTTTTGAAGGCCTG RPD_1916 2152667 - 2153491 + | hypothetical protein TERM 1732 2153679 - 2153659 - f 79 -8.3 -4.37092 | ACCGGCCGCAGAAAA GATCGCGAA AAA TTCGCAACC GCGTTGAACGTTTGG TERM 1733 2153745 - 2153713 - f 83 -12.8 -3.85698 | gap 1, opp_overlap 2153710 2153709 TGGCCCGCTGACAAA TCGTTGTGGGAGCGG AAAG CCCCTCCC-CAACGA GGCTGTATTCGGCGC TERM 1734 2153793 - 2153824 + F 100 -18.8 -4.19735 | opp_overlap 2153788 AGCGCCAATATGGCT TGACCCGCCCGG TTGTCCCC CCGGGCGGGTCA TTTCGTTTTGGCGGC RPD_1917 2154062 - 2154604 + | hypothetical protein RPD_1918 2155174 - 2157240 + | chemotaxis sensory transducer TERM 1735 2157256 - 2157266 + T 76 -8.2 -4.11692 | opp_overlap 2157256 2157245 AGCATGATCCCGAAA GCGG ACT CCGC TTTTCGGGATAGCTC TERM 1736 2157335 - 2157291 - T 89 -14.3 -3.95324 | opp_overlap 2157300 TAGCTCGAACAACAA GCTGGAGCAGGATGACGACTC GAA GATGAGTCATCCTGCTTCAGC CGGACCCATCGATCA RPD_1919 2157983 - 2157348 - | chemotaxis sensory transducer RPD_1920 2159647 - 2158295 - | twin-arginine translocation pathway signal RPD_1921 2160410 - 2159763 - | peptidase C15, pyroglutamyl peptidase I TERM 1737 2160220 - 2160204 - G 71 -12.3 -3.27923 | overlap 2160200 CCCGAACATCAGCAA CGCATCG GGG CGATGCG CCGCGAGAAGGTCCG RPD_1922 2161399 - 2160407 - | arginine/ornithine transport system ATPase RPD_1923 2161580 - 2162059 + | hypothetical protein RPD_1924 2162857 - 2162066 - | hypothetical protein RPD_1925 2163198 - 2162854 - | hypothetical protein RPD_1926 2163514 - 2163200 - | DNA polymerase, beta-like region TERM 1738 2163350 - 2163338 - G 72 -4.7 -4.45945 | overlap 2163339 ATCGAGCAACGAAAA GCGGG CAT CCGGC GCGACTTCCACCAGA TERM 1739 2163553 - 2163591 + r 76 -10.3 -3.92373 | overlap 2163559 ACCGTCCCGCAGCTA CTCCGCCGCCTGGCT-GGC GTG GCCGAGCCGGGCGTTG-AG TTTGTGGATCAGCTC TERM 1740 2163559 - 2163586 + r 84 -15.6 -3.33711 | gap 1, overlap 2163553 CCGCAGCTACTCCGC CGCCTGGCT-GGC GTG GCCGAGCCGGGCG TTGAGTTTGTGGATC RPD_1927 2165709 - 2163550 - | methylmalonyl-CoA mutase RPD_1928 2166409 - 2165945 - | glutathione-dependent formaldehyde-activating, GFA TERM 1741 2166273 - 2166292 + g 71 -9.2 -3.86897 | ACTTCGGCCATCGAC GCGAACGG GGCG CCGGTCGC TTTCTGGCACATCCG RPD_1929 2168277 - 2166406 - | methylmalonyl-CoA mutase TERM 1742 2166563 - 2166597 + g 74 -9.8 -3.89346 | opp_overlap 2166537 CCCGCGTCGCGCAGC GCCTGCGCGGCCGGAG CGG CATGAGCCGCGTAGGC TTTGTCCGATGAGCA RPD_1930 2168892 - 2168401 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase RPD_1931 2169262 - 2168885 - | dihydroneopterin aldolase RPD_1932 2170437 - 2169259 - | dihydropteroate synthase TERM 1743 2169623 - 2169661 + g 87 -16.9 -3.35996 | gap 1, opp_overlap 2169614 2169626 2169647 AAGAAGGCGTTGATA TCAGCGACGATGTCGATC GAAG GATCGGCGTCGTCGC-GA TTGTGCATCACGATC TERM 1744 2169659 - 2169626 - G 74 -15.3 -2.62515 | opp_overlap 2169623, overlap 2169614 2169647 AAGGCGTTGATATCA GCGACGATGTCGATC GAAG GATCGGCGTCGTCGC GATTGTGCATCACGA TERM 1745 2170827 - 2170816 - H 72 -4.4 -4.57569 | CTATTGTCCGAAAAA TCAG CTCA CTGA TGACACAGAATTGGG TERM 1746 2170841 - 2170861 + H 76 -6.9 -4.44448 | GATGACACAGAATTG GGATGCA ACGCCTG TGCATCC TTTGTTTGCAGTCCT TERM 1747 2171582 - 2171569 - g 71 -3.1 -4.66833 | GCGGAAGCGGAAAAA GTTGC TAAA ACAAC GAGGCGTCAAAGAAG RPD_1933 2171035 - 2172423 + | hypothetical protein RPD_1934 2173092 - 2172685 - | hypothetical protein RPD_1935 2173495 - 2173112 - | hypothetical protein TERM 1748 2175340 - 2175306 - g 73 -14.2 -3.15544 | opp_overlap 2175326, overlap 2175308 GCGCAGCGTCACCAA CACGGTGATCGGCGGC ATC GCCGCCGATCTCGGCA AGCGCGTCGGCGGTT TERM 1749 2175338 - 2175308 - g 84 -16.8 -3.14051 | opp_overlap 2175326, overlap 2175306 GCAGCGTCACCAACA CGGTGATCGGCGGC ATC GCCGCCGATCTCGG CAAGCGCGTCGGCGG RPD_1936 2173810 - 2175420 + | protein of unknown function DUF853, NPT hydrolase putative TERM 1750 2176513 - 2176546 + G 76 -15.1 -3.18912 | opp_overlap 2176489 CTTCCGCGCGTTCGT CACGGCGCGGCTGCC GGGC GACTGCCGCGCCGAG TTCATCGATCACTCC RPD_1937 2175443 - 2176849 + | hypothetical protein TERM 1751 2177057 - 2177078 + T 90 -15.1 -3.76125 | opp_overlap 2177057 CGCTCCAGGCAAAAA CGCCGCCCG GAAT TGGGCGGCG TTTGGATTCAGATCG TERM 1752 2177078 - 2177057 - T 100 -14.4 -4.65895 | opp_overlap 2177057 CGCTCCAGGCAAAAA CGCCGCCC GGAATT GGGCGGCG TTTGGATTCAGATCG RPD_1938 2177918 - 2177139 - | hypothetical protein TERM 1753 2178006 - 2177987 - H 73 -12.8 -3.14463 | opp_overlap 2177985 2177984 AATGTTTTGCAGCAA GCCGCCGC GCGC GCGGCAGC CATGATTCCTGGTCG RPD_1939 2178227 - 2179135 + | hypothetical protein RPD_1940 2179307 - 2179723 + | MucR family transcriptional regulator TERM 1754 2179817 - 2179829 + F 78 -6.3 -4.66318 | opp_overlap 2179817 2179816 TATTCTGAGAAAATT TTCCT ATC AGGAA TTTTCTTGGAGTACT TERM 1755 2179991 - 2179961 - g 79 -11.1 -3.90112 | GGCCGTGCAATGAAA CGGCGCGAGCG CAATGCGAC CGCTCGCGCGG CCGGCAAGGCCGAGA RPD_1941 2179955 - 2180557 + | hypothetical protein TERM 1756 2180583 - 2180616 + T 86 -16.1 -3.22388 | gap 1, overlap 2180584 TCGACGTCGCCTTCA GCTCGACGCG-GCGAG TGT TTCGTGCGCGTCGAGC TTGATCCGTTCGATC RPD_1942 2181011 - 2180580 - | Fe-S metabolism associated SufE RPD_1943 2181524 - 2181120 - | hypothetical protein TERM 1757 2181667 - 2181650 - H 91 -5.5 -5.26119 | TCCTTAAAAACAAAA CGTCGAA GCGA TTCGGCG TAAACATTCGATTGA TERM 1758 2181899 - 2181878 - H 81 -11.6 -3.90112 | GTTGGGCCAACCAAA GACGGGAG CGCTAC CTCCCGTC ACACGGCGACAGCGA TERM 1759 2181979 - 2182018 + G 75 -13.7 -3.34895 | opp_overlap 2181991, overlap 2181980 ATTGCTGCATCCGTC GGCGCGAT-ACGACGCGCT GGCG AGCGCG-CGTCATCGCGCG TTCATTGCGCCTCGC TERM 1760 2181980 - 2182017 + G 80 -17.2 -2.60723 | opp_overlap 2181991, overlap 2181979 TTGCTGCATCCGTCG GCGCGAT-ACGACGCGCT GGCG AGCGCG-CGTCATCGCGC GTTCATTGCGCCTCG TERM 1761 2183503 - 2183489 - g 70 -10 -3.66803 | opp_overlap 2183489 GCGGAAGACCTGAAA CGGATC GGC GATCCG TTCTTCCAGGCCGGA RPD_1944 2181926 - 2183749 + | multi-sensor signal transduction histidine kinase TERM 1762 2183808 - 2183759 - g 75 -9.1 -4.06384 | gap 1, opp_overlap 2183783 2183783, overlap 2183762 GCCTAAGACGAGAAA CGACGATGACGCGCCGCGGCGGCG TCG CGGCGCCGGTGCA-GTGGTCGTCG CGGACGGCGACGAGC RPD_1945 2183742 - 2184542 + | peptidoglycan binding domain-containing protein RPD_1946 2184637 - 2184984 + | hypothetical protein TERM 1763 2185117 - 2185077 - T 83 -9.7 -4.30987 | opp_overlap 2185084, overlap 2185082 ACGCGTCAGAATAAA GAGTAGCTCAGGTTCTGAT TCT ATCAGAACCGGAGAAGCTC TAGCGATCGGTGCCG RPD_1947 2186088 - 2185117 - | hypothetical protein TERM 1764 2186051 - 2186019 - G 73 -14.1 -3.15579 | overlap 2186008 GCAACGTCGGACGAA TGTCGACGCCCTCGC GAT GCGAGAGCGCCATCA GACCGTCGAATCCGG RPD_1948 2187385 - 2186339 - | polysaccharide deacetylase RPD_1949 2187980 - 2187465 - | hypothetical protein TERM 1765 2187506 - 2187533 + g 83 -15.6 -3.55444 | gap 1, overlap 2187526 GGAAGGACTTCTTCG CCTG-GGCCCGGG AAC TCCGGGCCGCAGG TTTGGAACGTGCAGC TERM 1766 2187746 - 2187756 + g 76 -8.2 -4.23054 | GTTGCGACATCTCCA GGCC CTT GGCC TTTTCCATGATCTGT TERM 1767 2188283 - 2188340 + H 71 -13.1 -3.09516 | gap 1, opp_overlap 2188268 CGCCATGCCGAGACC CGTGACGACGGC-GGGCCGGGGCAGGGT GAT GCGCCGCGCCGCCCCCGCCGCCGCCGCG TTCGATCCTGAAACC RPD_1950 2188366 - 2189142 + | hypothetical protein RPD_1951 2189719 - 2189156 - | hypothetical protein RPD_1952 2190294 - 2189716 - | hypothetical protein RPD_1953 2192578 - 2190326 - | penicillin-binding protein 1A TERM 1768 2193078 - 2193125 + G 74 -9.9 -3.76759 | gap 1, opp_overlap 2193095 CATCTACGACCCGCG TCGGCTCGATCC-CGAAACCTT CCTCA AAGGTTTCGTGGCGCGGGGCGA TTTCGTCGACTTCCT TERM 1769 2193140 - 2193179 + G 77 -7 -4.4891 | opp_overlap 2193150 ATTTCGTCGACTTCC TGCTCGACAAGCTTCGCC AGAT GCCGGAGATCGGCGAGCA TTTTCTGATCGTCGG RPD_1954 2193043 - 2195064 + | ATPase RPD_1955 2195061 - 2195570 + | hypothetical protein TERM 1770 2195885 - 2195939 + T 77 -2.5 -5.01497 | gap 1, overlap 2195877 2195898 TTCCTTGGGGCGTTT CC-TCCCTTGACTTGGCCCGGGCGCC GATT GGCGACCGGGCCTTTTTATGTGCTGG TTTTTATGTGCTGGT TERM 1771 2195898 - 2195925 + T 100 -19.8 -5.01497 | overlap 2195885 TTCCTCCCTTGACTT GGCCCGGGCGCC GATT GGCGACCGGGCC TTTTTATGTGCTGGT RPD_1956 2197059 - 2195992 - | twin-arginine translocation pathway signal TERM 1772 2196369 - 2196343 - G 73 -15.1 -2.8474 | opp_overlap 2196342 2196357 2196359, overlap 2196340 GTCGACGTAGAACGA CGCGCGGGCGA AGCGG TCGGCCGCGCG GTTGGTGCCGGGTAG TERM 1773 2197597 - 2197560 - g 77 -16.3 -2.55074 | gap 1 GCCAAGCCTAAGCCA TCGGCCGC-GTCGCAGGC CAA GCCTGCGACGGCTGCGGA CCCGAAAGCCGCGCC RPD_1957 2197446 - 2197742 + | hypothetical protein TERM 1774 2198321 - 2198376 + G 71 -14.6 -2.66692 | gap 1, overlap 2198302 2198301 2198322 GCCGCGCCACGATCA TCGCGGCGCTCAGCCTGTTCATCGCCG GCT CGGTGATGTGCGCGCTG-GCGCCGAGC GTTCTGGTGCTGATC TERM 1775 2198322 - 2198377 + G 70 -11.9 -3.45023 | gap 3, overlap 2198302 2198301 2198321 CCGCGCCACGATCAT CGC--GGCGCTCAGCCTGTTCATCGCCG GCT CGGTGATGTGCGCGCTG-GCGCCGAGCG TTCTGGTGCTGATCC RPD_1958 2197957 - 2199549 + | major facilitator transporter TERM 1776 2199682 - 2199664 - f 71 -13.8 -2.57211 | overlap 2199663 AGGGCGCTCGACAAT GGCGCGCA TCA CGCGCGCC GGCTGAGACCAACGG RPD_1959 2199725 - 2201128 + | hypothetical protein RPD_1960 2201308 - 2201475 + | Flp/Fap pilin component RPD_1961 2201747 - 2201881 + | hypothetical protein RPD_1962 2202107 - 2202337 + | hypothetical protein TERM 1777 2202806 - 2202777 - g 70 -11.3 -3.61178 | overlap 2202782 2202794 CTCAGCGACCCGAAA GCGAACGGCGACG CAAA CGTCGCCAAGCGC AATGCGACGCTGCAG TERM 1778 2203131 - 2203098 - g 72 -8.7 -4.15044 | overlap 2203078 2203099 2203114 2203115 2203119 GTTCGCCCCAAGAAA GGCGAGCGCACCG AAACCGAA CGGCGCGCGCGCA CGCTGGCGTCGCTCG RPD_1963 2202441 - 2203316 + | hypothetical protein TERM 1779 2204095 - 2204045 - g 88 -16.7 -3.64703 | gap 1, opp_overlap 2204057 2204084, overlap 2204046 GCGCGCTGATCGAAA CGTGCCGCGTCGCCGACGCGCCGC CGCT GCAGCGCCTCGTCGTCGCGGT-CG ACCCGCCGGTGTCGT TERM 1780 2204097 - 2204046 - g 72 -15.1 -2.78679 | gap 2, opp_overlap 2204057 2204084, overlap 2204045 CGCGCTGATCGAAAC GT-G-CCGCGTCGCCGACGCGCCGC CGCT GCAGCGCCTCGTCGTCGCGGTCGAC CCGCCGGTGTCGTCG RPD_1964 2203420 - 2204580 + | hypothetical protein TERM 1781 2204681 - 2204626 - T 86 -15.5 -3.58726 | gap 3, opp_overlap 2204640, overlap 2204623 2204627 GTGGTCCAGAGAGAA CCGGGGCCCCGGATCTGCGAAGCGGTAC TTC GTACCGCATCGC-G-TCCGGGGCAC-GT AGATCACAGATCGTT TERM 1782 2204680 - 2204627 - T 87 -19 -2.75022 | gap 3, opp_overlap 2204640, overlap 2204623 2204626 TGGTCCAGAGAGAAC CGGGGCCCCGGATCTGCGAAGCGGTAC TTC GTACCGCATCGC-G-TCCGGGGCAC-G TAGATCACAGATCGT RPD_1965 2204972 - 2204685 - | excinuclease ABC subunit C TERM 1783 2205001 - 2205058 + H 100 -22.8 -3.68073 | gap 2, overlap 2205050 AAACGCCCAATAGTG CCCGTGTCCCGCG-C-GCGGCGCAATGC GCAA GCGTTGCGCCGCAGATGCGGGACCCCGG TTCTTGGATGAAATC TERM 1784 2205376 - 2205343 - g 81 -11.7 -3.96148 | gap 1, opp_overlap 2205370, overlap 2205345 GGCGCGCAGGAGAAA GACGCGC-ATCCGCTG GCG CAGCTGATCGCGCGGC CCAATCCGCGGCAGG TERM 1785 2205374 - 2205345 - g 77 -12.9 -3.57406 | gap 1, opp_overlap 2205370, overlap 2205343 CGCGCAGGAGAAAGA CGCGC-ATCCGCTG GCG CAGCTGATCGCGCG GCCCAATCCGCGGCA TERM 1786 2206266 - 2206237 - g 77 -3.3 -4.86621 | overlap 2206238 ACGCTCAACGAAAAA CGCGAAGCGGTCG GCTA CGCCCCGATCGCG GGCGGCGACCGGCTG RPD_1966 2205112 - 2206287 + | Phage portal protein, HK97 RPD_1967 2206328 - 2206546 + | hypothetical protein TERM 1787 2206728 - 2206682 - g 77 -12.9 -3.53343 | gap 2 AAGCCGCCGGCCAAA CGCCCGCGCCTCAAGGCGGCCGC CCC GCG-CCGCCGCGCGGCG-AAGCG GACGAAGTAATCGAG RPD_1968 2206556 - 2206738 + | hypothetical protein TERM 1788 2207572 - 2207522 - g 79 -11 -3.91084 | gap 1 CGACCGTCAAGCAAA CGCCGCGTCA-GTCGCTGCAGCG TCGCGC CGCCGAAGCGGCATGGCGGGGCG TGCAGAACGCAGCAT RPD_1969 2207053 - 2207760 + | peptidase U35, phage prohead HK97 RPD_1970 2207879 - 2209174 + | phage major capsid protein, HK97 RPD_1971 2209785 - 2209291 - | hypothetical protein TERM 1789 2209983 - 2210005 + H 75 -14.2 -2.78816 | overlap 2209979 TGAGATTTCACCCCT CCTTTGGCGG GTT TCGCCAAAGG TCTGCTCCGGACTAC RPD_1972 2210219 - 2211691 + | DNA-cytosine methyltransferase RPD_1973 2211750 - 2213102 + | ATPase RPD_1974 2213099 - 2214403 + | hypothetical protein TERM 1790 2214553 - 2214563 + F 71 -4.6 -4.49556 | overlap 2214549 GCCCCTAAGTTGAGG TGCC TGC GGCG TTTCTTTACTGCGGC TERM 1791 2214574 - 2214592 + F 74 -11.6 -3.39668 | CGGCGTTTCTTTACT GCGGCGAG TTC CGCGCCGC TTCTCAGGTTTCACC RPD_1975 2214705 - 2215352 + | hypothetical protein TERM 1792 2216241 - 2216196 - g 70 -13.1 -3.02144 | gap 1, opp_overlap 2216197 2216215 CTACGTGCTGGAAGA CGCCTCCGCCGC-GGGGCTGTC TCC GGCCGCCTGGGCGGCGAAGGCG GTGGCGATGTATCGG RPD_1976 2215477 - 2216589 + | hypothetical protein TERM 1793 2216650 - 2216636 - f 74 -12.8 -3.29461 | opp_overlap 2216631 2216630 CAATGGTTTCCACAA GCCGGC GAC GCCGGC ATGAGCTTGTCCAAC RPD_1977 2216808 - 2217128 + | hypothetical protein RPD_1978 2217545 - 2217228 - | hypothetical protein RPD_1979 2218468 - 2217764 - | peptidase S1 and S6, chymotrypsin/Hap RPD_1980 2218591 - 2219160 + | bacteriophage protein RPD_1981 2219157 - 2219486 + | hypothetical protein TERM 1794 2219660 - 2219676 + G 75 -11.5 -3.6682 | GGGTCTATGACGAGC CGCCGCG CGA TGCGGCG TTTCCCTACGTCACG RPD_1982 2219557 - 2219967 + | gene transfer agent (GTA) orfg8 RPD_1983 2219981 - 2220388 + | gene transfer agent (GTA) orf RPD_1984 2220396 - 2220713 + | gene transfer agent (GTA) orfg10 RPD_1985 2220710 - 2220907 + | hypothetical protein RPD_1986 2220910 - 2221476 + | gene transfer agent (GTA) orfg11 RPD_1987 2221564 - 2222199 + | hypothetical protein TERM 1795 2222425 - 2222404 - f 78 -6.5 -4.56775 | gap 1, overlap 2222405 ACGGCTCTCGAAAAA TCGG-GCTGC GAG GCAGCGCCGC AAGCAACCACTCCAG TERM 1796 2222485 - 2222449 - f 72 -7.6 -4.14397 | gap 1, opp_overlap 2222444 2222460, overlap 2222444 ACTCCAGAAATCAAA CACTTGATTC-ATTCAT TCAA ATGAATTAAATCAAGCG AAGTTCAGTGCTTCT RPD_1988 2222512 - 2223873 + | Xaa-Pro aminopeptidase-like RPD_1989 2223929 - 2224609 + | hypothetical protein RPD_1990 2224870 - 2225049 + | transposase and inactivated derivative TERM 1797 2225106 - 2225084 - f 70 -9.9 -3.6692 | overlap 2225082 CGTGATGCCAAAATA CGCAACCAT CGGTC ATGGTCGCG ATGTGAGCGGGGCGT RPD_1991 2225261 - 2226184 + | bacteriophage protein RPD_1992 2226225 - 2226668 + | putative phage cell wall peptidase, NlpC/P60 TERM 1798 2226848 - 2226872 + F 71 -5.6 -4.35327 | overlap 2226808 2226843 2226805 CGGGAGAGGGGGCGC GCTGCGGCTG TTGTT CGGTCGTGGC TTTCATTTTTCCTGA TERM 1799 2227678 - 2227640 - g 72 -11.7 -3.54129 | overlap 2227644 2227660 2227661 CAGATCTCCGGCAAA GGCA-GCGCGACGCCGGAG AAC CGCCA-CGTCGCGCACGCC GCCTCCGACGTGGTC RPD_1993 2226929 - 2230780 + | gene transfer agent (GTA) orfg15 TERM 1800 2231016 - 2231000 - g 70 -10.8 -3.53012 | GCGTGGGCCGGGAAA GCCGCG CAGAT CGCGGC CTGGTACGACGGCGG TERM 1801 2232334 - 2232379 + G 86 -17.6 -3.01712 | gap 1, opp_overlap 2232337, overlap 2232336 GCATCTGTGGATGAA CAACGGCACCAGCGCCGGCGC GGTCA GCGT-GGCGCTGGTGCAGATG TATTGCGAGCCGGCG TERM 1802 2232336 - 2232377 + G 72 -14.4 -3.06696 | gap 1, opp_overlap 2232337, overlap 2232334 ATCTGTGGATGAACA ACGGCACCAGCGCCGGCGC GGTCA GCGT-GGCGCTGGTGCAGA TGTATTGCGAGCCGG TERM 1803 2232376 - 2232337 - g 85 -15.7 -3.71848 | gap 1, opp_overlap 2232336 2232334 TCTGTGGATGAACAA CGGCACCAGCGCCGGCGC GGTCA GCGT-GGCGCTGGTGCAG ATGTATTGCGAGCCG RPD_1994 2230793 - 2232427 + | hypothetical protein TERM 1804 2232506 - 2232463 - f 88 -17.4 -3.06183 | gap 1, opp_overlap 2232460 GTCAGTGCGAGCGAA GCGACGCGATCCGGGGCGCCG TGC CGG-ACCCTGGACAGCGTCGC CGCTTCGCTTCGCGC RPD_1995 2232549 - 2233286 + | putative glycohydrolase TERM 1805 2233602 - 2233546 - g 75 -14.4 -3.28416 | gap 1, overlap 2233547 GATCAGCGAGACCAA CGCCACGATCCGCGCCGAGATCGCATC GAAC GATGCGATC-CAGCGCTGGTGGCGGCC GGCCTATGCCTGGGA TERM 1806 2233601 - 2233547 - g 85 -17.9 -2.56728 | gap 1, overlap 2233546 ATCAGCGAGACCAAC GCCACGATCCGCGCCGAGATCGCATC GAAC GATGCGATC-CAGCGCTGGTGGCGGC CGGCCTATGCCTGGG RPD_1996 2233289 - 2233861 + | hypothetical protein RPD_1997 2233957 - 2234631 + | winged helix family two component transcriptional regulator TERM 1807 2234698 - 2234676 - f 72 -12 -3.28712 | opp_overlap 2234675 2234674 GGTGTCGTCGCAGAA GCCGGGCT GATGGCG AGCCCGGC CGTTCTCGTCAAACC RPD_1998 2234685 - 2236082 + | periplasmic sensor signal transduction histidine kinase RPD_1999 2236186 - 2236707 + | LipA a lipoprotein RPD_2000 2236920 - 2238320 + | hypothetical protein TERM 1808 2238662 - 2238720 + G 82 -11.6 -4.15044 | gap 2 GCCCCCGAAGCATCC GCCGCACGCGTCGAGATCGGACGCCGGC TGCTC GCCAGCG-CCGAGGTCGA-GCGCCCGGC TTTGTTCACAACGAG RPD_2001 2238428 - 2239585 + | cytochrome c-type biogenesis protein cycH TERM 1809 2240176 - 2240150 - g 73 -12.3 -3.45023 | gap 1, overlap 2240153 2240154 GGACGACTACGAGAA GAAGCCGCCCGG CGCC CCGGG-GGCCTC CGCCGACGCCGCGGG TERM 1810 2240173 - 2240153 - g 74 -10.4 -3.85864 | gap 1, overlap 2240150 2240154 CGACTACGAGAAGAA GCCGCCCGG CGCC CCGGG-GGC CTCCGCCGACGCCGC RPD_2002 2239710 - 2240204 + | cytochrome c-type biogenesis protein CcmE RPD_2003 2240201 - 2242183 + | cytochrome c-type biogenesis protein CcmF RPD_2004 2242198 - 2242695 + | cytochrome C biogenesis protein RPD_2005 2243843 - 2242785 - | hypothetical protein RPD_2006 2245933 - 2243897 - | endothelin-converting protein 1 RPD_2007 2246731 - 2246081 - | hypothetical protein RPD_2008 2247133 - 2247624 + | hypothetical protein RPD_2009 2248151 - 2247663 - | hypothetical protein TERM 1811 2248169 - 2248199 + r 71 -13.8 -2.5955 | overlap 2248166 2248175 GATGATCCTTCGTTG TTCGGCCGCCGACG GGT CGACGGCGGCCGTC TCCATTGTCGGACGT RPD_2010 2249125 - 2248220 - | ferredoxin RPD_2011 2249476 - 2251056 + | peptidase S1C, Do TERM 1812 2251137 - 2251159 + F 70 -12.7 -2.86539 | overlap 2251135 GGCGGCGCTTTCCGG GGGACGGGT GAACA GCCCGTCCC TGCTTATACCTTCCG TERM 1813 2251208 - 2251242 + F 100 -20.1 -3.92324 | CCGTCGGAAGGTCAG GCGGGCGGTGGAGTT CCCCC AGCTCCATCGCCCGC TTTCATGTTCAGAGG RPD_2012 2251297 - 2252022 + | winged helix family two component transcriptional regulator RPD_2013 2252006 - 2253478 + | periplasmic sensor signal transduction histidine kinase TERM 1814 2256340 - 2256356 + G 73 -9.3 -3.97947 | overlap 2256341 CGGGTGTTGGTGCGC GCCGGCG ATG CGCCGGA TTTCTCCTCGCTGGA RPD_2014 2253475 - 2256444 + | glutamate-ammonia-ligase adenylyltransferase RPD_2015 2256738 - 2256448 - | hypothetical protein RPD_2016 2257884 - 2256871 - | helix-turn-helix, AraC type TERM 1815 2258144 - 2258129 - H 76 -6 -4.54727 | TCGGTCAAAGGAAAA CGCCGC TTGC GGGGCG TCCAGGTCGACACCG RPD_2017 2258299 - 2261769 + | Outer membrane autotransporter barrel RPD_2018 2264245 - 2261930 - | ATP-binding region, ATPase-like RPD_2019 2265828 - 2264449 - | cation diffusion facilitator family transporter RPD_2020 2266929 - 2265961 - | zinc-binding alcohol dehydrogenase RPD_2021 2267952 - 2266957 - | 2-nitropropane dioxygenase, NPD TERM 1816 2268186 - 2268136 - R 70 -10.5 -3.62775 | ACGAGTGCGCAACAA CCTCCC-GATTCCGGGTTCGCGAAC TGC GTTCGCGC-CCCGTAATGAAGGAGG ACAGGCGAGGCGTGT RPD_2022 2268986 - 2268201 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 1817 2269078 - 2269122 + r 80 -15 -3.14132 | gap 1, opp_overlap 2269076 2269075, overlap 2269076 2269039 GCGTACGAGCAATCT CGGGATTCCGGGTTCGCTCGC TTGC GCGAGCGC-CCCGGAATGACG TTGCTACGGCGGCAG RPD_2023 2270112 - 2269138 - | 2-dehydropantoate 2-reductase RPD_2024 2271766 - 2270234 - | hypothetical protein RPD_2025 2272291 - 2271794 - | hypothetical protein RPD_2026 2273387 - 2272374 - | hypothetical protein RPD_2027 2274870 - 2273593 - | formyl-coenzyme A transferase TERM 1818 2275025 - 2275058 + r 72 -13.8 -2.78384 | opp_overlap 2275019 GCAAACAATTCCTGT CCGTGCGCCTCGAC ATAAGC GGCGAGGCGCAAGG TGTGGTCGCGCGCCA RPD_2028 2275788 - 2275006 - | GntR family transcriptional regulator RPD_2029 2276307 - 2275915 - | hypothetical protein TERM 1819 2276338 - 2276373 + H 86 -12.5 -4.08945 | overlap 2276343 GCGATTTGTGACGAG CGCAGGCAGCCGGCG CATGTC CGCCGTCTGCTTTCG TTTTCACCGCGTGCT TERM 1820 2276343 - 2276368 + H 86 -11.8 -4.19735 | overlap 2276338 TTGTGACGAGCGCAG GCAGCCGGCG CATGTC CGCCGTCTGC TTTCGTTTTCACCGC TERM 1821 2276468 - 2276499 + G 79 -11.6 -3.85817 | gap 1, overlap 2276457 AGCGGCGGCCGGCGG CGGCGT-GCCGCAAT GGA ATTGCGGCTGCTCCG TTTGTCGCGCCGCGT RPD_2030 2276430 - 2277356 + | pyrroloquinoline quinone biosynthesis protein PqqB TERM 1822 2277916 - 2277945 + G 70 -9.9 -3.71378 | gap 1, overlap 2277917 GAGCTACTTCAAGCG CCGGC-TCGCGCAG GCG CCGCGCGACGCCGA TTTCGCTCTGGACTA RPD_2031 2277362 - 2278117 + | pyrroloquinoline quinone biosynthesis protein PqqC TERM 1823 2278345 - 2278376 + G 70 -13 -3.02144 | opp_overlap 2278338 2278366 CAAGTACACCGCCGA TCGCGCCGAGATCG GAAC CGATGTCGTCGCGA TGTTGCAGGACCTCG RPD_2032 2278127 - 2278435 + | coenzyme PQQ synthesis D TERM 1824 2278949 - 2278919 - g 83 -8.2 -4.65916 | CTCATGCGAAGAAAA TCGAAGTCGCGCGC TGG ACCCGCGAGCTCGA TCTGCCGCTCACCGT RPD_2033 2278432 - 2279619 + | pyrroloquinoline quinone biosynthesis protein PqqE RPD_2034 2281054 - 2279945 - | zinc-binding alcohol dehydrogenase TERM 1825 2280982 - 2281016 + g 77 -12.2 -3.73068 | CCTCGCCGGCCTTCG GCCCCTCGAGATCG AGTTCGA CGATTTCGAGCGGC TTCTTGGCTTCGAAC RPD_2035 2282790 - 2281270 - | ATPase TERM 1826 2282845 - 2282867 + r 88 -17 -2.98545 | opp_overlap 2282832 2282831, overlap 2282842 2282839 ATCCGAGCGCAACCC GTCGAGCGCC GCG GGCGCTCGGC TCATTGTTATGCACG RPD_2036 2283582 - 2282962 - | regulatory protein, TetR TERM 1827 2283538 - 2283561 + g 74 -2.3 -4.78326 | gap 1, overlap 2283533 2283538 2283539 GAGGATCTCTGCCGG C-CGCTCGGC TTTGC GCCGGGCACG TTTCTTTGTTTCAGG TERM 1828 2283981 - 2283961 - g 86 -18.3 -3.18582 | opp_overlap 2283921 GATCCGACCGAGCAA CGCGCCGAC CTT GTCGGCGCG CAGGCGGCAGTGGCG TERM 1829 2284617 - 2284598 - g 71 -3.4 -4.65895 | overlap 2284600 TCGTCGATCCAAAAA CCCGCGCG GTGG CGCTCAAG AATGTCGTGATCGAG RPD_2037 2283664 - 2284755 + | secretion protein HlyD RPD_2038 2284752 - 2285825 + | secretion protein HlyD TERM 1830 2287350 - 2287364 + G 79 -2.1 -5.08824 | overlap 2287347 GGTTTTCCACCCGCT TCAGT CGCGT GCTGA TTTTTTGCATGCGGC TERM 1831 2288521 - 2288542 + G 84 -17.3 -3.15861 | CGTCGCGGCATTGTT GCCGAGCGG GGCG CCGCTCGGC TTCGTCGCAATCCTC RPD_2039 2285822 - 2288878 + | acriflavin resistance protein RPD_2040 2288875 - 2289159 + | hypothetical protein RPD_2041 2289189 - 2290382 + | patatin TERM 1832 2290613 - 2290590 - g 83 -13.2 -3.77722 | gap 1, opp_overlap 2290584, overlap 2290560 TCCAACCAGGAACAA GCCGGA-CCGA TCG TCGGATCCGGC GCGGACATTGTCCGG RPD_2042 2290458 - 2291072 + | hypothetical protein RPD_2043 2291255 - 2292208 + | tRNA-dihydrouridine synthase A RPD_2044 2292779 - 2292249 - | hypothetical protein RPD_2045 2292996 - 2292790 - | hypothetical protein RPD_2046 2294634 - 2293042 - | periplasmic sensor signal transduction histidine kinase TERM 1833 2294534 - 2294560 + g 70 -13.6 -3.05384 | CGATCGCGAGCTTCG CGGACGCGCTGC GCG GCAGCGCGCCGG TTACGTGCCGGGGCG RPD_2047 2296000 - 2294807 - | 3-hydroxyisobutyrate dehydrogenase RPD_2048 2296000 - 2297118 + | MRP ATP/GTP-binding protein RPD_2049 2297338 - 2298426 + | twin-arginine translocation pathway signal TERM 1834 2298471 - 2298448 - T 100 -18.2 -4.56978 | opp_overlap 2298448 GCCTGAAACAACAAA CCCGGCCTTC GAAA GAAGGCCGGG TTTTTTATTTGGCTG TERM 1835 2298448 - 2298471 + T 100 -18.2 -5.65927 | opp_overlap 2298448 GCCTGAAACAACAAA CCCGGCCTTC GAAA GAAGGCCGGG TTTTTTATTTGGCTG TERM 1836 2298527 - 2298503 - T 80 -15 -3.12351 | gap 1 GGGGGTGAGATGGAA GGC-GGCGGCG TTAT CGCCGCCAGCC GAGCAGGGTGCTCAG RPD_2050 2300380 - 2298539 - | TRAP dicarboxylate transporter- DctM subunit TERM 1837 2299660 - 2299641 - G 79 -3.4 -5.03314 | overlap 2299643 TGCACCGCGAAAAAA TAGGCGGC GGCG GCTGCCGA GATCGCCGCGAGCGG RPD_2051 2301011 - 2300418 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1838 2301186 - 2301152 - R 71 -9.2 -3.69354 | opp_overlap 2301162 GGTGACAAGTCGAAA GGTTGATGTGGCAGCA CGC CGCTGCTGCATCAGCC GCCGGTGACGCTCAT moaA 2302215 - 2301181 - | molybdenum cofactor biosynthesis protein A RPD_2053 2302783 - 2302322 - | hypothetical protein RPD_2054 2303624 - 2302947 - | phosphoglycolate phosphatase RPD_2055 2303770 - 2304468 + | ribose-5-phosphate isomerase A TERM 1839 2304595 - 2304580 - g 72 -11.8 -3.60098 | ATGGCGCAGGCCAAA CCGCCG ACGC CGGCGG CGGTTGCGGCGGCCA RPD_2056 2304493 - 2305002 + | hypothetical protein TERM 1840 2305506 - 2305524 + G 71 -9.6 -3.83502 | opp_overlap 2305476 GGGCATCGAGCATGT CATCTCGT CGA ACGAGGTG TTTCATCTGCCGGTG RPD_2057 2305039 - 2306424 + | glutathione reductase RPD_2058 2306602 - 2307990 + | phospho-2-dehydro-3-deoxyheptonate aldolase RPD_2059 2308033 - 2308395 + | diacylglycerol kinase nadE 2308440 - 2310197 + | NAD synthetase RPD_2061 2310651 - 2310238 - | PilT protein-like RPD_2062 2310938 - 2310648 - | SpoVT/AbrB-like RPD_2063 2312281 - 2311136 - | hypothetical protein TERM 1841 2311752 - 2311728 - G 81 -8.4 -4.44245 | opp_overlap 2311742, overlap 2311730 AGATTATCGAGAAAA CCGCCGCCGC CTTGC GCCGCCGCGG CATATTGCGGGCCGC RPD_2064 2312775 - 2312467 - | hypothetical protein TERM 1842 2312495 - 2312531 + g 72 -8.6 -4.07568 | overlap 2312496 GTGATGGCGACGTAC TCGTCGCAGCCGCC ACGGCCGCA GGCGGCGCCGACGG TTTTCGGCACCGCGC TERM 1843 2313856 - 2313872 + G 78 -10.1 -4.09685 | opp_overlap 2313854 CACGAGAACGAAGTG GCGCAGT CGT GCTGCGC TTTTCACACCTCGCG cysS 2313085 - 2314476 + | cysteinyl-tRNA synthetase RPD_2066 2314473 - 2314787 + | hypothetical protein RPD_2067 2314784 - 2314915 + | hypothetical protein TERM 1844 2315412 - 2315389 - g 74 -2.3 -4.72986 | gap 1 CACCTCGATGAAAAA GACGTTCGCG GATGT CGCGG-CGCC GGGAGCGGATCAATG RPD_2068 2314919 - 2315428 + | GCN5-related N-acetyltransferase RPD_2069 2315425 - 2317023 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 1845 2317705 - 2317731 + G 73 -12.3 -3.44146 | gap 2, overlap 2317707 ACGTTGCCTGGAACG CC-GCGGC-GCGC GCC GCGCAGCCGCTGG TTGATTATGGGCCGG TERM 1846 2317707 - 2317728 + G 71 -13.7 -2.87274 | gap 1, overlap 2317705 GTTGCCTGGAACGCC GCGGC-GCGC GCC GCGCAGCCGC TGGTTGATTATGGGC TERM 1847 2318385 - 2318423 + G 75 -15.3 -2.752 | gap 1, overlap 2318385 GGGCAGGGGCTGCCG CTTGCGATCG-GCGCGGC GATC GCCGCGCCCGACCGCAAA GTTGTGTGTCCGCAT TERM 1848 2318385 - 2318424 + G 81 -15.1 -3.59202 | gap 2, overlap 2318385 GGGCAGGGGCTGCCG C-TTGCGATCG-GCGCGGC GATC GCCGCGCCCGACCGCAAAG TTGTGTGTCCGCATG RPD_2070 2317197 - 2318753 + | hypothetical protein RPD_2071 2318764 - 2320173 + | FAD linked oxidase-like TERM 1849 2320160 - 2320184 + T 72 -13.6 -2.71731 | gap 1, opp_overlap 2320174, overlap 2320143 ATGTCCAACCCGCGG CCGGCG-CGGA CTAA TCCGACGCCGG TCGTTGGAGAGTAGC RPD_2072 2322351 - 2320213 - | cytochrome c, class I RPD_2073 2323231 - 2322632 - | hypothetical protein RPD_2074 2323426 - 2325381 + | ABC transporter related RPD_2075 2325430 - 2326128 + | phosphatidylserine decarboxylase TERM 1850 2326358 - 2326381 + G 82 -11.7 -4.08216 | overlap 2326352 2326355 2326359 GGATGGAGCTCGCGG TCGCGGCGA TCGTCT TCGCCGCGG TTTTGGACGGCATCG TERM 1851 2326359 - 2326380 + G 70 -13 -3.04715 | overlap 2326352 2326355 2326358 GATGGAGCTCGCGGT CGCGGCGA TCGTCT TCGCCGCG GTTTTGGACGGCATC RPD_2076 2326204 - 2327073 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1852 2327852 - 2327891 + G 82 -4.9 -4.8622 | gap 1 CCGAACTATGCGGGC GGCGGGAAGTGC-CGATC CTGGA GATCGCGCGCGATCCGTC TTTTTCGTTGCAGCG RPD_2077 2327227 - 2327946 + | hypothetical protein RPD_2078 2328197 - 2328970 + | MotA/TolQ/ExbB proton channel RPD_2079 2329001 - 2329822 + | OmpA/MotB RPD_2080 2330150 - 2330476 + | rhodanese-like protein TERM 1853 2331617 - 2331581 - g 100 -13.2 -4.56597 | gap 1, opp_overlap 2331589, overlap 2331585 TTGTTTCGCCAAAAA CGACCAGACGCTCGA CACTGCCC TCGAGCGTCTG-TCG GTCGCAGTGCACGGG RPD_2081 2330484 - 2331638 + | hypothetical protein RPD_2082 2331650 - 2332762 + | extracellular solute-binding protein RPD_2083 2334742 - 2332775 - | radical SAM family protein RPD_2084 2335255 - 2336088 + | hypothetical protein RPD_2085 2337120 - 2336188 - | lipid A biosynthesis lauroyl acyltransferase TERM 1854 2336289 - 2336318 + g 83 -12.9 -3.76968 | gap 1 TGCCCTGGATATCGA TCTCGCC-GTTCGC ATT GCGGACCGGCGGGA TTTCCTCGGTGAGTT RPD_2086 2338142 - 2337120 - | zinc-binding alcohol dehydrogenase RPD_2087 2339457 - 2338177 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1855 2338883 - 2338865 - G 70 -8.8 -3.91897 | opp_overlap 2338871, overlap 2338866 GTGGCGACGCACAAA GCGGCG TCGGCCT CGCCGC GGCGGATCGCTTCGA RPD_2088 2340709 - 2339486 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1856 2340107 - 2340154 + g 84 -14.2 -3.94877 | gap 1, opp_overlap 2340133 CGCGATGTCGCTCTG TCCGGCGGCGATGCGCGCC AACGCAATTCG GGCG-GCGTCGACGCCGGA TTCTTCTTCGCCCAT TERM 1857 2340365 - 2340328 - G 74 -14.7 -3.05844 | opp_overlap 2340354, overlap 2340330 CCTCGGAGTTCAACA CAGCGGAGTCGACCGCG AGGT CGCGTTCGCCGCCGCCG GCCGCGACGATCATG TERM 1858 2340363 - 2340330 - G 73 -13.7 -3.08813 | opp_overlap 2340354, overlap 2340328 TCGGAGTTCAACACA GCGGAGTCGACCGCG AGGT CGCGTTCGCCGCCGC CGGCCGCGACGATCA RPD_2089 2341175 - 2340702 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ RPD_2090 2341484 - 2341203 - | acyl carrier protein RPD_2091 2341982 - 2341653 - | hypothetical protein RPD_2092 2342666 - 2342157 - | MgtC/SapB transporter RPD_2093 2343326 - 2342721 - | hypothetical protein TERM 1859 2342826 - 2342811 - G 75 -11.8 -3.72231 | GGACAGAGCGAAGAA CGCGGC AACC GCCGCG ATGTCCCAAATATCG TERM 1860 2343166 - 2343150 - G 73 -3.6 -4.64766 | overlap 2343151 2343154 GTGATAGGCGAAAAA CGCACG GAACT CGTCCG GCCGCGCGGCCAGCG TERM 1861 2343192 - 2343210 + g 74 -8.1 -4.25104 | opp_overlap 2343192 CAGCGCCAGAAACAC GTTCGGC ACGAA GCCGGAC TTTTCCTGGACGGCG RPD_2094 2345137 - 2343389 - | hypothetical protein RPD_2095 2345578 - 2346123 + | hypothetical protein RPD_2096 2346871 - 2346191 - | phosphoserine phosphatase SerB TERM 1862 2347151 - 2347117 - g 74 -12.7 -3.61178 | opp_overlap 2347116 2347118 GGCAGCCAGGGCAAA GGCCGGCGGCCGTGC TTATC GCAGGGCCGACCGCC AGCGGCAAGTCGGCG TERM 1863 2347347 - 2347400 + G 81 -12.5 -3.85698 | gap 4, overlap 2347347 2347348 2347381 2347383 GCCGGCGCCTATGTC GA--GGCGGCCGC-CGGC-GCGCTGGC CGAA GCCCGCGCTGCCGGGCGGTTGCCGATC TTTGTCGGCGGCACC TERM 1864 2347347 - 2347398 + G 78 -14.3 -3.51934 | gap 2, overlap 2347347 2347348 2347381 2347383 GCCGGCGCCTATGTC GAGGCGGCCGC-CGGC-GCGCTGGC CGAA GCCCGCGCTGCCGGGCGGTTGCCGA TCTTTGTCGGCGGCA TERM 1865 2347348 - 2347397 + G 85 -17.8 -2.70946 | gap 2, overlap 2347347 2347347 2347381 2347383 CCGGCGCCTATGTCG AGGCGGCCGC-CGGC-GCGCTGGC CGAA GCCCGCGCTGCCGGGCGGTTGCCG ATCTTTGTCGGCGGC RPD_2097 2347047 - 2348018 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1866 2348276 - 2348291 + F 100 -8.2 -5.55769 | CGGACGGTGCGCTGA GGGCCT TCGA GGGCCC TTTTTTATTGTCCGA RPD_2098 2348381 - 2350159 + | acetolactate synthase 3 catalytic subunit RPD_2099 2350200 - 2351186 + | hypothetical protein TERM 1867 2351704 - 2351723 + G 77 -13.6 -3.53224 | overlap 2351717 ACCACCGGGTCGAAT CGCTTCGG CTTG CCGAAGCG TTTCGCGCCCGCGTG ilvH 2351346 - 2351888 + | acetolactate synthase 3 regulatory subunit RPD_2101 2352296 - 2351898 - | putative AtsE TERM 1868 2352853 - 2352841 - g 70 -10.5 -3.63515 | GGCGACCGCGAAGAA GGCGG AAG CCGCC GGGTTCAAGGTGATG RPD_2102 2352674 - 2353693 + | ketol-acid reductoisomerase TERM 1869 2353831 - 2353863 + G 100 -18.6 -4.46926 | gap 1, opp_overlap 2353835, overlap 2353835 GATGACGGCAACTCA C-AAACCGGACCGCG GCAA CGCGGTCCGGTTTCG TTTTGTGCTAGGATC TERM 1870 2353858 - 2353835 - g 100 -19.6 -3.97636 | opp_overlap 2353835 2353831 ACGGCAACTCACAAA CCGGACCGCG GCAA CGCGGTCCGG TTTCGTTTTGTGCTA TERM 1871 2353835 - 2353858 + G 100 -19.6 -4.28487 | opp_overlap 2353835, overlap 2353831 ACGGCAACTCACAAA CCGGACCGCG GCAA CGCGGTCCGG TTTCGTTTTGTGCTA RPD_2103 2353817 - 2354752 + | short-chain dehydrogenase/reductase SDR RPD_2104 2356327 - 2354768 - | substrate-binding region of ABC-type glycine betaine transport system RPD_2105 2357115 - 2356324 - | ABC transporter related TERM 1872 2356873 - 2356836 - G 72 -14.1 -3.02144 | gap 1 TGAGGTGCGGGAACA GCG-CGCCGGCCTGGAAC ACG GTTCCGATCCGGCGTCGC AGCACGATCGGGTCG RPD_2106 2357218 - 2358036 + | ABC transporter related TERM 1873 2358314 - 2358331 + G 76 -8.3 -4.21471 | overlap 2358301 2358299 GTGCCGGTCGCCGGC CGGCTGC TGTT GCCGCCG TTCTTCTTTTCCAAT RPD_2107 2358221 - 2359018 + | binding-protein-dependent transport systems inner membrane component RPD_2108 2359074 - 2360099 + | extracellular solute-binding protein RPD_2109 2360111 - 2360827 + | hypothetical protein RPD_2110 2362045 - 2360828 - | hypothetical protein TERM 1874 2361397 - 2361346 - G 93 -19.5 -2.74523 | overlap 2361343 2361394 CGAGGCCGAAGATCA GCGC-GCTCGCCGCGGCCAGCGCCA GCGC TGA-GCCGGCCGTGGCAAGCAGCGC GCGCCACTGCCCGGC RPD_2111 2363083 - 2362055 - | biotin synthase RPD_2112 2363594 - 2365168 + | 2-isopropylmalate synthase TERM 1875 2365229 - 2365198 - f 72 -7.2 -4.21974 | opp_overlap 2365204 2365205, overlap 2365204 2365205 GCATTATGCAATAAA CGCAAACGCAGCGC TTCG GCGCTGCTTTTTTG CGCCGCAGCAATGCC TERM 1876 2365223 - 2365204 - f 74 -9.2 -3.93262 | opp_overlap 2365204 2365205, overlap 2365198 2365205 TGCAATAAACGCAAA CGCAGCGC TTCG GCGCTGCT TTTTTGCGCCGCAGC TERM 1877 2365205 - 2365222 + F 100 -12.7 -5.00616 | opp_overlap 2365204 2365198 2365205, overlap 2365204 GCAATAAACGCAAAC GCAGCGC TTCG GCGCTGC TTTTTTGCGCCGCAG TERM 1878 2365222 - 2365205 - f 70 -12.7 -2.95234 | opp_overlap 2365204 2365205, overlap 2365204 2365198 GCAATAAACGCAAAC GCAGCGC TTCG GCGCTGC TTTTTTGCGCCGCAG RPD_2113 2365345 - 2366349 + | TRAP dicarboxylate transporter, DctP subunit TERM 1879 2366355 - 2366388 + F 100 -13.1 -4.43859 | gap 1, opp_overlap 2366349, overlap 2366356 2366357 GACGAAGTAGTTCGA CAGCGAGCACCC-GCG CAT CGCCGGGTGCTCGCCA TTTTCTGGAATTCTG TERM 1880 2366356 - 2366387 + F 88 -16.6 -3.25592 | gap 1, opp_overlap 2366349, overlap 2366355 2366357 ACGAAGTAGTTCGAC AGCGAGCACCC-GCG CAT CGCCGGGTGCTCGCC ATTTTCTGGAATTCT TERM 1881 2366357 - 2366386 + F 90 -20.1 -2.54632 | gap 1, opp_overlap 2366349, overlap 2366356 2366355 CGAAGTAGTTCGACA GCGAGCACCC-GCG CAT CGCCGGGTGCTCGC CATTTTCTGGAATTC TERM 1882 2366527 - 2366551 + G 73 -14.3 -3.15861 | opp_overlap 2366513 ATTGATCGCGACGAT GATCGGCGGCG CCA CGCTGCTGATC TTCATCGCCGTGATG RPD_2114 2366477 - 2367061 + | tripartite ATP-independent periplasmic transporter DctQ RPD_2115 2367058 - 2368383 + | TRAP dicarboxylate transporter- DctM subunit TERM 1883 2368400 - 2368429 + F 73 -8.6 -4.03413 | opp_overlap 2368414, overlap 2368389 2368401 2368428 CGCGGCGAACAGGGT GCGCTTGGTTAC AACTTG GTAACCAGGCGG TTTCTGTCCAAACCT RPD_2116 2368504 - 2369136 + | hypothetical protein RPD_2117 2369751 - 2369476 - | hypothetical protein RPD_2118 2370622 - 2370269 - | hypothetical protein RPD_2119 2371167 - 2370619 - | hypothetical protein RPD_2120 2371610 - 2371158 - | hypothetical protein RPD_2121 2372051 - 2371743 - | hypothetical protein RPD_2122 2374084 - 2372063 - | ATPase RPD_2123 2374167 - 2374604 + | hypothetical protein TERM 1884 2374993 - 2374971 - f 74 -10.5 -3.78329 | opp_overlap 2374970, overlap 2374952 2374972 CGCCACGAAGCCAAA GCGTCCGCG CCCGC CGCGGATGC GGCCGATGCATGCGC RPD_2124 2375135 - 2375539 + | hypothetical protein TERM 1885 2375670 - 2375629 - f 72 -12.3 -3.29144 | gap 1, opp_overlap 2375629 2375644 2375646 CGATCTCCGGCACAA CGCCCATCGCGGTTCCGC AAGGAGA GCCCA-CCGCGATGGGCG TTTCCATGTGTGCTA TERM 1886 2375629 - 2375670 + F 78 -12.3 -3.74792 | gap 1, opp_overlap 2375629, overlap 2375644 2375646 CGATCTCCGGCACAA CGCCCATCGCGGTTCCGC AAGGAGA GCCCA-CCGCGATGGGCG TTTCCATGTGTGCTA RPD_2125 2375937 - 2376530 + | hypothetical protein TERM 1887 2376976 - 2377015 + G 83 -14.4 -3.78775 | opp_overlap 2376976 CAGGGCTTGAGGACA TTCGCGCAACCTTTCCAA AGCA TTGGAAGGGGTACGCGAA TTTCGTCATGCGCCA RPD_2126 2376912 - 2381669 + | ATPase TERM 1888 2381996 - 2381974 - g 71 -12.1 -3.28712 | GCCGTTGTCCGACAA GCTCGATCT GTTTG AGATCGAGC AGATCACCCCCACAG RPD_2127 2381666 - 2383144 + | hypothetical protein RPD_2128 2383472 - 2383939 + | transposase, mutator type TERM 1889 2384334 - 2384357 + F 93 -9.5 -4.71061 | opp_overlap 2384299 2384336, overlap 2384336 TCGGTGTTCACGAAA AACCCCGCC AGCAAC GGCGGGGTC TTTTTCACTATCGCT TERM 1890 2384336 - 2384355 + F 83 -12.1 -3.96999 | opp_overlap 2384299 2384336, overlap 2384334 GGTGTTCACGAAAAA CCCCGCC AGCAAC GGCGGGG TCTTTTTCACTATCG TERM 1891 2384355 - 2384336 - f 100 -12.8 -4.72272 | opp_overlap 2384336 2384334, overlap 2384299 GGTGTTCACGAAAAA CCCCGCCA GCAA CGGCGGGG TCTTTTTCACTATCG RPD_2129 2384554 - 2384961 + | ATP-binding region, ATPase-like RPD_2130 2385374 - 2385910 + | hypothetical protein RPD_2131 2387604 - 2388521 + | cation diffusion facilitator family transporter TERM 1892 2389493 - 2389469 - f 81 -9.9 -4.15222 | overlap 2389470 ACCCCTCTTAAGAAA GGGGCGCATCA GAC TGAAGCGCCCG CAGAAATTGCACCCA TERM 1893 2389492 - 2389470 - f 75 -13.4 -3.08812 | overlap 2389469 CCCCTCTTAAGAAAG GGGCGCATCA GAC TGAAGCGCCC GCAGAAATTGCACCC RPD_2132 2389809 - 2391413 + | hypothetical protein RPD_2133 2392357 - 2392106 - | hypothetical protein RPD_2134 2393094 - 2392564 - | regulatory protein, MarR RPD_2135 2393875 - 2393267 - | DedA family protein TERM 1894 2393378 - 2393364 - G 79 -7 -4.63486 | opp_overlap 2393364 2393361 ACTGGTTCAACAAAA CGTCCG ATC CGGGCG TAGTTCTGTCCCATC RPD_2136 2394279 - 2393980 - | hypothetical protein RPD_2137 2396919 - 2394358 - | heavy metal translocating P-type ATPase TERM 1895 2394836 - 2394849 + g 74 -2.3 -4.77036 | overlap 2394831 2394837 2394841 CCAACCTCCCCGGCG ATCGC TTCG GCGAC TTTTTGATGATCGCC TERM 1896 2395606 - 2395620 + g 75 -3.4 -4.84529 | overlap 2395607 AAATCTGTCGGTGAA CCGCTG CGT CGGCGA TTTTTGGGTTTCTGC RPD_2138 2397818 - 2397084 - | flagellar basal body rod protein RPD_2139 2398722 - 2398141 - | hypothetical protein RPD_2140 2399456 - 2399977 + | regulatory protein, MarR RPD_2141 2400117 - 2400503 + | hypothetical protein RPD_2142 2400563 - 2401834 + | outer membrane efflux protein TERM 1897 2402697 - 2402659 - g 74 -12.4 -3.53012 | overlap 2402660 GTGTTCGTTCGGAAA GGCGACAAGTTCGAGGTC CGC GACGTCGAACTCGGCGCG CGTGATACCGAAAAC TERM 1898 2402696 - 2402660 - g 75 -15.9 -2.71712 | overlap 2402659 TGTTCGTTCGGAAAG GCGACAAGTTCGAGGTC CGC GACGTCGAACTCGGCGC GCGTGATACCGAAAA RPD_2143 2401831 - 2402817 + | secretion protein HlyD TERM 1899 2404451 - 2404422 - g 77 -5.7 -4.67038 | gap 1, overlap 2404424 CTCTGAAAAGGAAAA TTGGTTC-ATGCGC CTC GCGCATCGGACCTA CGTGCCACTGCTCGA TERM 1900 2405028 - 2405050 + G 77 -11.2 -3.7732 | opp_overlap 2405027 TGCCGATGTCAAGAC CGAGCAGGTC GCG GGCCTGCCCG TTCTTACTGTGAAGC TERM 1901 2406033 - 2406056 + G 73 -11 -3.71284 | gap 1 GTTCCGCCGCGAAGC CTCGCCAGCCG AGT TGGC-GGCGAG TTCTGTTCCTACAAA RPD_2144 2402875 - 2406087 + | heavy metal efflux pump CzcA TERM 1902 2406229 - 2406243 + G 81 -8.6 -4.56597 | opp_overlap 2406227 2406229, overlap 2406217 TGGCGTCCGGAAAGA CGTTGA CTT TCAACG TTTTTGACGAAGCCA RPD_2145 2406084 - 2406455 + | hypothetical protein TERM 1903 2406511 - 2406479 - f 70 -12.8 -2.8655 | gap 1 GTTAGTCATACGACA GCG-CGAAGCGCC TACCCACT GGCGCTTCGACGC TACCGAAGATGATAG TERM 1904 2407216 - 2407231 + G 77 -3.2 -4.90906 | overlap 2407218 CTTTGAAGCGATCTT GCCGAT CTGC ATCGCC TTTTTGGTCTTCTCA RPD_2146 2406527 - 2407660 + | putative OpgC protein RPD_2147 2407689 - 2408432 + | hypothetical protein RPD_2148 2408627 - 2409556 + | hypothetical protein RPD_2149 2409740 - 2409519 - | hypothetical protein TERM 1905 2409617 - 2409648 + g 100 -18.7 -3.8211 | overlap 2409618 CCGACAGCCCGCGGG TGGCCGCTGCGGC CGGGAC GCCGCAGCGGCCC TTCTTCTCGATGCCG TERM 1906 2409618 - 2409647 + g 100 -22.2 -2.88945 | overlap 2409617 CGACAGCCCGCGGGT GGCCGCTGCGGC CGGGAC GCCGCAGCGGCC CTTCTTCTCGATGCC RPD_2151 2410496 - 2410080 - | hypothetical protein RPD_2150 2409793 - 2410143 + | hypothetical protein RPD_2152 2410995 - 2410756 - | hypothetical protein RPD_2153 2412005 - 2411391 - | hypothetical protein TERM 1907 2411709 - 2411671 - G 82 -6.4 -4.77165 | opp_overlap 2411671 2411688, overlap 2411672 2411693 GCTCCTAGAACAAAA TGCGCCCGCACCGGCGGC AGA ACCGGCCTTGCCGGCGCC GTGTTTCCGGATCCC RPD_2154 2412292 - 2412005 - | hypothetical protein TERM 1908 2412263 - 2412232 - G 70 -10 -3.64703 | gap 1 GCTGCTCGACGTAAA GGGCGGCCAGCTCCG CAT CGGCGC-GGCCATCC CACTCCTTCCAGTTA TERM 1909 2412444 - 2412424 - H 71 -13.9 -2.66316 | overlap 2412421 GCTTCGACGAGATCA CGCCGCGGC GCC GCCCCGGCG AGCCACAGCTGGAGC RPD_2155 2412704 - 2413210 + | hypothetical protein RPD_2156 2413499 - 2413182 - | hypothetical protein TERM 1910 2413588 - 2413618 + H 73 -11.2 -3.59979 | gap 1, opp_overlap 2413587 TATCGTGGAGTTAAG TCCGT-CGGTCGC ATTTTA GCGACCGGGCGGA TTTCAGATCGCCAGC RPD_2157 2413644 - 2414492 + | metallophosphoesterase RPD_2158 2414492 - 2414974 + | hypothetical protein RPD_2159 2414971 - 2415546 + | hypothetical protein RPD_2160 2415543 - 2415887 + | hypothetical protein RPD_2161 2416860 - 2415919 - | ATP dependent DNA ligase RPD_2162 2416971 - 2417291 + | hypothetical protein TERM 1911 2417309 - 2417268 - f 87 -5.8 -5.19261 | gap 3 AAAGTCAGCAAAAAA GCG-CGTCCCGGCGCC-CGCC GCT GATGAGGCGTCG-GACGTCGC GCATCCGGCGCTCGA RPD_2163 2417350 - 2417493 + | hypothetical protein RPD_2164 2417497 - 2418372 + | hypothetical protein TERM 1912 2418696 - 2418677 - g 85 -10 -4.1891 | gap 1 GGCGCTGAAGATAAA CGACGCGCG TGT CGC-CGTCG TCCATGGAAGCTGGA RPD_2165 2418369 - 2418911 + | hypothetical protein TERM 1913 2418952 - 2418994 + F 91 -16.5 -3.63627 | opp_overlap 2418950 2418949 2418961 2418985 2418986 AAGATCGACCAACTT TCCCTCAAACTTTCCCTCA ACGAA TGAGTGAAAGTCTGAGGGA TTTAGGCTCTGCAAA TERM 1914 2419032 - 2419074 + F 100 -26.7 -3.72324 | ACAATCGGCCGACTT TCCCTCAGACTTTCACTCA CCGTT TGAGTGAAAGTCTGAGGGA TTATTGATAACGCTC RPD_2166 2419434 - 2419847 + | hypothetical protein RPD_2167 2419918 - 2420547 + | hypothetical protein RPD_2168 2420540 - 2420830 + | hypothetical protein RPD_2169 2421399 - 2420914 - | hypothetical protein RPD_2170 2421854 - 2422252 + | hypothetical protein TERM 1915 2422398 - 2422368 - f 81 -15.4 -3.01712 | overlap 2422381 CGTCGGGGGGCAAGA CCGTCGGCAGCAAC TCG GTCGCTGCCGTCAG GCTCGCGACCGCGCT TERM 1916 2422592 - 2422551 - f 73 -10.7 -3.55548 | overlap 2422553 GAAGATGGTCTTAAA GATGTCGCTCATCAGCGCG ACGG CGCGCCGAGCAGCGTCAGC CCGAAGCCGCCGCGA TERM 1917 2422590 - 2422553 - f 72 -11.9 -3.35224 | overlap 2422551 AGATGGTCTTAAAGA TGTCGCTCATCAGCGCG ACGG CGCGCCGAGCAGCGTCA GCCCGAAGCCGCCGC RPD_2171 2423335 - 2423634 + | hypothetical protein RPD_2172 2424076 - 2423786 - | hypothetical protein RPD_2173 2426235 - 2425120 - | hypothetical protein RPD_2174 2426464 - 2427186 + | regulatory protein, LuxR RPD_2175 2427276 - 2427914 + | autoinducer synthesis protein RPD_2176 2428972 - 2428334 - | hypothetical protein TERM 1918 2428795 - 2428840 + g 76 -2.5 -4.89852 | gap 2, overlap 2428797 2428800 CCGCACCGTTGTTTG TGGTAGCCCCGCCGGGAGGCG CCTGCA CGT-TCTCCGCGGCGCT-CCG TTTTTCTGCCTGTCG RPD_2177 2429299 - 2429051 - | ATPase RPD_2178 2432614 - 2431151 - | hypothetical protein TERM 1919 2431618 - 2431633 + g 73 -6.1 -4.30719 | GGGTGGTTACCGAGG GGCTG TCATAC CAGCC TTTGTTGTGGAGCCA TERM 1920 2431814 - 2431802 - G 70 -6.3 -4.21908 | GAGCAGCATCGAAAA CACTA TCA TAGTG AAGAAGAAAATTTGG RPD_2179 2432763 - 2434535 + | hypothetical protein RPD_2180 2434570 - 2434947 + | hypothetical protein RPD_2181 2435041 - 2435313 + | hypothetical protein RPD_2182 2436796 - 2435345 - | hypothetical protein TERM 1921 2437026 - 2436992 - H 79 -10.9 -3.87815 | gap 2 TGGGAGGCTGATAAA TGGGACCCGGACTGACT CTT AATCAG-C-GGGTCCCA GGTTCGAGCCCTGGT RPD_2183 2437866 - 2438936 + | putative taurine transport system protein TERM 1922 2439440 - 2439383 - g 85 -13.6 -4.07568 | gap 3, opp_overlap 2439383 GGGGCTCGGCGAAAA CGCCAAGATCGCGTTGATCGTGATCGGCA CGC TGCCGTGCATGATC--CGCGATC-TGGCG ATGAAGGTGCTCGAA RPD_2184 2438970 - 2439788 + | binding-protein-dependent transport systems inner membrane component TERM 1923 2440544 - 2440593 + G 75 -9 -4.11404 | gap 1, overlap 2440545 2440572 CTTTCGATCCGCTCC GGCCGGGACGACCCGGC-CGAAC AGGGA GCATGAGCCGGGACGACCCGGCG TTTGTCTGATGTGAG RPD_2185 2439785 - 2440576 + | ABC transporter related RPD_2186 2440616 - 2441458 + | hypothetical protein TERM 1924 2441537 - 2441560 + G 71 -12.5 -3.30124 | opp_overlap 2441537 CGTGGTCGGCGATAA TCCGCAAGG GACAGA CCTTGCGGA TTGTCGACACTCACG TERM 1925 2441560 - 2441537 - g 71 -12.5 -3.28712 | opp_overlap 2441537 CGTGGTCGGCGATAA TCCGCAAGG GACAGA CCTTGCGGA TTGTCGACACTCACG RPD_2187 2441461 - 2442096 + | hypothetical protein RPD_2188 2442099 - 2445650 + | allophanate hydrolase subunit 2 TERM 1926 2445699 - 2445656 - T 75 -13.8 -3.05596 | gap 1, opp_overlap 2445659 2445665 2445666 2445672, overlap 2445666 GACGGCGTGACGTAA CTTGGATACAGCGTCGCCGGC ATA GCCGGCGACGCCTTGTCCT-G TCTCAGGACCGCGGC TERM 1927 2445659 - 2445697 + T 93 -21 -2.87132 | opp_overlap 2445656 2445666, overlap 2445665 2445666 2445672 GGCGTGACGTAACTT GGATACAGCGTCGCCGGC ATA GCCGGCGACGCCTTGTCC TGTCTCAGGACCGCG TERM 1928 2445665 - 2445691 + T 95 -19.4 -3.49777 | opp_overlap 2445656 2445666, overlap 2445659 2445666 2445672 ACGTAACTTGGATAC AGCGTCGCCGGC ATA GCCGGCGACGCC TTGTCCTGTCTCAGG TERM 1929 2445690 - 2445666 - T 100 -22.9 -2.89742 | opp_overlap 2445666 2445665 2445659 2445672, overlap 2445656 CGTAACTTGGATACA GCGTCGCCGGC ATA GCCGGCGACGC CTTGTCCTGTCTCAG TERM 1930 2445666 - 2445690 + T 100 -22.9 -2.69545 | opp_overlap 2445656 2445666, overlap 2445665 2445659 2445672 CGTAACTTGGATACA GCGTCGCCGGC ATA GCCGGCGACGC CTTGTCCTGTCTCAG RPD_2189 2448126 - 2445730 - | RNA binding S1 TERM 1931 2446257 - 2446301 + g 85 -10 -4.25104 | opp_overlap 2446246, overlap 2446244 AGGACGCCGGCTGCA GCGACTTCAATTTGCTGGTC TGGCC GATCAGCGCCTTGATGTCGC TTTTGGTCGCCGCCA RPD_2190 2449378 - 2448254 - | acyltransferase 3 RPD_2191 2449675 - 2449845 + | Flp/Fap pilin component TERM 1932 2449936 - 2449966 + F 100 -18.2 -4.87389 | overlap 2449917 2449916 GGTCGGCGGTGACCA GCCCCGGGGCTTTC CCC GCCAGCCCCGGGGC TTTCTTTTTCGACTA RPD_2192 2450084 - 2451202 + | hypothetical protein TERM 1933 2452154 - 2452184 + G 79 -16.2 -2.87243 | gap 1, opp_overlap 2452150, overlap 2452151 2452177 2452177 TCTGCAGCAGACTTC GGTCG-CGCCCGC AGTCAG GCGGGCGGCGACC TCGTTGTCGTCGTCG RPD_2193 2451333 - 2452718 + | hypothetical protein RPD_2194 2452732 - 2453553 + | hypothetical protein RPD_2195 2453706 - 2454173 + | hypothetical protein TERM 1934 2454208 - 2454265 + T 86 -12.2 -4.12603 | gap 3, opp_overlap 2454186 2454185 2454218, overlap 2454215 2454218 GATCGGCTCAGCCGA TC-TCTCGAA--ACCGAAGGCGGTAGCGC ACA GCGCTGCCGCCTTCGGTCGTTCTAGGCGC TTGTTCTTTCCTGGC TERM 1935 2454215 - 2454255 + T 100 -21.9 -3.32066 | opp_overlap 2454186 2454185 2454218, overlap 2454208 2454218 TCAGCCGATCTCTCG AAACCGAAGGCGGTAGCGC ACA GCGCTGCCGCCTTCGGTCG TTCTAGGCGCTTGTT TERM 1936 2454252 - 2454218 - T 100 -25.8 -3.54424 | opp_overlap 2454218 2454215 2454208 GCCGATCTCTCGAAA CCGAAGGCGGTAGCGC ACA GCGCTGCCGCCTTCGG TCGTTCTAGGCGCTT TERM 1937 2454218 - 2454252 + T 100 -28 -2.83119 | opp_overlap 2454218, overlap 2454215 2454208 GCCGATCTCTCGAAA CCGAAGGCGGTAGCGC ACA GCGCTGCCGCCTTCGG TCGTTCTAGGCGCTT TERM 1938 2454452 - 2454496 + T 75 -13.7 -3.04983 | opp_overlap 2454451 2454446 ATCCCCAAACAGGAG CTTAGATCAGGATGACGGTTC GAA GATCAGTCATCCTGATCTAGA TATGTGTCGTCTCTG RPD_2196 2456609 - 2454492 - | periplasmic sensor hybrid histidine kinase TERM 1939 2454959 - 2454938 - G 74 -7.9 -4.25848 | AACGCGGCAGGAAAA GGTCGAAGC GCGT GCCGCGACC GATGTGGCTGTCGAC RPD_2197 2456796 - 2457110 + | cytochrome c, class I RPD_2198 2457220 - 2458359 + | acyl-CoA dehydrogenase-like TERM 1940 2458482 - 2458435 - f 74 -9.8 -3.71517 | gap 1, overlap 2458439 2458441 TAACATCGAAGACAA TTAAGATTCCGGGTTCGCGCGCC TTC GGCTCGCGC-CCCGGAATGACAA GGGAAGAGACGAATG TERM 1941 2458478 - 2458439 - f 77 -12.8 -3.54784 | gap 1, overlap 2458435 2458441 ATCGAAGACAATTAA GATTCCGGGTTCGCGCGCC TTC GGCTCGCGC-CCCGGAATG ACAAGGGAAGAGACG TERM 1942 2458476 - 2458441 - f 84 -15.4 -3.34209 | gap 1, overlap 2458439 2458435 CGAAGACAATTAAGA TTCCGGGTTCGCGCGCC TTC GGCTCGCGC-CCCGGAA TGACAAGGGAAGAGA TERM 1943 2458800 - 2458821 + G 77 -10.9 -3.85698 | gap 1 GCTTGCAAAGTTCGG CTC-CGACGC ATT GCGTCGCGAG TTTCTGGCGCCCGCG RPD_2199 2458495 - 2459649 + | acyl-CoA dehydrogenase-like RPD_2200 2459778 - 2460428 + | glutathione S-transferase-like TERM 1944 2460579 - 2460565 - f 76 -12.8 -3.42699 | AGGGATGCAGCAGAA GGGCGG CAT CCGCCC CGGGAGGAACGATGA RPD_2201 2460591 - 2461418 + | AraC family transcriptional regulator TERM 1945 2461988 - 2461955 - g 73 -13.3 -3.30441 | gap 1, overlap 2461976 GATGATGTTCGACAA CGCGGTCGAGAAAATC CAA GACTTCCTCGAC-GCG ATGAAGGACGCCGGC RPD_2202 2461548 - 2462414 + | hypothetical protein RPD_2203 2462581 - 2464185 + | AMP-dependent synthetase and ligase TERM 1946 2464463 - 2464488 + G 70 -11.1 -3.53012 | gap 1, opp_overlap 2464452 AGAACCGTGCGCGCA CCGCGTCGGCCG GCT CCGCCGA-GCGG TTTCACAAGCGCGGG TERM 1947 2465061 - 2465047 - g 75 -11.4 -3.73647 | GCGACCGAGGAAGAA CTCGGC GGC GCCGAG ATGCACACCGCGATC RPD_2204 2464351 - 2465973 + | propionyl-CoA carboxylase TERM 1948 2466604 - 2466568 - g 81 -14.5 -3.57462 | GATCCGAGGCGCAAA GCGCGTTCGGAGATC CGACCGT GATCCTCGAACGCGC CATCGTCGATCCGCG RPD_2205 2465985 - 2467961 + | carbamoyl-phosphate synthase L chain, ATP-binding RPD_2206 2467974 - 2468753 + | enoyl-CoA hydratase TERM 1949 2468770 - 2468815 + F 82 -14.7 -3.28791 | gap 1, overlap 2468793 2468796 AGGGGGCAGTCTCTC GTTCGTCATTCCGGG-GCGCGC GAC GCGCGAACCCGGAATCCCGAGC TTGTGACGGCGAGAT TERM 1950 2468793 - 2468844 + F 78 -11.6 -3.72576 | overlap 2468770 2468796 2468826 2468830 TTCCGGGGCGCGCGA CGCGCGAACCCGGAATCCCG AGCTTGTGACGG CGAGATTCCGGGTTCGCTCA TTTCGTGAGCGCCCC TERM 1951 2468796 - 2468841 + F 83 -16.3 -2.96695 | overlap 2468770 2468793 2468826 2468830 CGGGGCGCGCGACGC GCGAACCCGGAATCCCG AGCTTGTGACGG CGAGATTCCGGGTTCGC TCATTTCGTGAGCGC RPD_2207 2468939 - 2470477 + | AMP-dependent synthetase and ligase TERM 1952 2470537 - 2470566 + F 77 -12.9 -3.60475 | opp_overlap 2470521, overlap 2470538 CGCCACGCATGGCTT ACTCGCGGCAATC CTCC GATTGCTGCGAGC TTTGCCGTGACCATT TERM 1953 2470538 - 2470565 + F 81 -16.4 -2.75963 | opp_overlap 2470521, overlap 2470537 GCCACGCATGGCTTA CTCGCGGCAATC CTCC GATTGCTGCGAG CTTTGCCGTGACCAT TERM 1954 2471172 - 2471203 + G 73 -14.4 -3.15574 | gap 1, overlap 2471170 GCCGACCGCGCTCGA GGCGCTGCGCCAGGC GGC GCC-GGCGCAACGTC TGTTACTGGCATTGC RPD_2208 2470573 - 2472027 + | hypothetical protein RPD_2209 2473319 - 2472057 - | beta-lactamase RPD_2210 2473580 - 2474488 + | catechol 1,2-dioxygenase TERM 1955 2475139 - 2475181 + G 83 -13.3 -3.85698 | gap 1, overlap 2475140 GCTGTTGCAGGCGAT CGCCGGAGCC-CATGGCGCG ACGC CGCGCCAGGTGGCGCTGGCA TTTCTGACCCGCCGA TERM 1956 2475140 - 2475180 + G 82 -16.8 -2.91276 | gap 1, overlap 2475139 CTGTTGCAGGCGATC GCCGGAGCC-CATGGCGCG ACGC CGCGCCAGGTGGCGCTGGC ATTTCTGACCCGCCG RPD_2211 2474504 - 2475349 + | aldo/keto reductase TERM 1957 2475397 - 2475351 - f 73 -10.8 -3.55444 | gap 2, opp_overlap 2475353, overlap 2475352 TGCCGATGCTGTAAA CGGCGACGGCGCGGCGGCCTCC GCGCG GGAGGCCAAAGCGCCGCCG--G TTGCATAGCCGAGTC TERM 1958 2475398 - 2475352 - f 72 -13.5 -2.73124 | opp_overlap 2475353, overlap 2475351 GCCGATGCTGTAAAC GGCGACGGCGCGGCGGCCTCC GCGCG GGAGGCCAAAGCGCCGCCGGT TGCATAGCCGAGTCC TERM 1959 2475353 - 2475397 + F 71 -12.6 -3.05596 | opp_overlap 2475351 2475352 CCGATGCTGTAAACG GCGACGGCGCGGCGGCCTCC GCGCG GGAGGCCAAAGCGCCGCCGG TTGCATAGCCGAGTC RPD_2212 2475526 - 2476473 + | hypothetical protein RPD_2213 2477072 - 2476611 - | regulatory proteins, AsnC/Lrp TERM 1960 2477572 - 2477596 + G 74 -7.7 -4.28994 | CTCGACCGGCTCGGT CGGCCTCGGCG TGG CGCAGACGCTG TTTTCGTCGCTGGTC RPD_2214 2477204 - 2479600 + | transketolase, central region RPD_2215 2480027 - 2481457 + | aldehyde dehydrogenase TERM 1961 2481491 - 2481516 + F 100 -20.5 -4.35116 | opp_overlap 2481487 TTCGGCAATCATCGA CGCCGGGATGG TCCG CCATCCCGGCG TTTTGCTGTAGGGTG RPD_2216 2481623 - 2483332 + | dihydroxy-acid dehydratase RPD_2217 2483623 - 2483345 - | hypothetical protein TERM 1962 2483829 - 2483811 - g 81 -11.6 -3.91911 | GCTATCCCAACGAAA GCGCGGAG TAT CGCCGCGC CCGCACTGCGCTGCT RPD_2218 2483750 - 2484445 + | protein of unknown function DUF899, thioredoxin-like RPD_2219 2484863 - 2486032 + | hypothetical protein TERM 1963 2486034 - 2486062 + F 88 -17.3 -3.05384 | CCAGCATGAGCTGAC GCCGGCGCGCGGC GCT GCCGCGGGCCGGG TTCGCTGCAGCGCGC RPD_2220 2486234 - 2486545 + | hypothetical protein TERM 1964 2486632 - 2486602 - T 70 -10.4 -3.66288 | gap 1, overlap 2486603 CACGCCGGAAGATAA GGGCAGG-GCGGC TCGGTG GCCGCTCCTGCCG CAGCGGTGGAGCTTG TERM 1965 2486631 - 2486603 - T 72 -13.9 -2.79452 | gap 1, overlap 2486602 ACGCCGGAAGATAAG GGCAGG-GCGGC TCGGTG GCCGCTCCTGCC GCAGCGGTGGAGCTT TERM 1966 2486635 - 2486660 + T 87 -19.1 -2.52896 | GCCGCTCCTGCCGCA GCGGTGGAGCT TGGC AGCTCCACCGC TCGGTTCACCGCTGA RPD_2221 2486958 - 2486680 - | hypothetical protein TERM 1967 2487369 - 2487384 + r 74 -4.6 -4.55697 | overlap 2487372 ATGTCGTGCTCTCCC CGGCGA ACGG TCTCCG TTTGTTTGTCGCCGT TERM 1968 2487372 - 2487388 + r 71 -8.7 -3.87815 | overlap 2487369 TCGTGCTCTCCCCGG CGAACGG TCT CCGTTTG TTTGTCGCCGTCCCC TERM 1969 2487893 - 2487938 + r 100 -14.4 -4.34402 | gap 3, opp_overlap 2487923 ACGCGACGCTGCCGT GCTAGAGCTTTTCCGGTTCTGAT CAA ATCAGAACCGG--A-GCTCTAGC TTTTGGTCTGACGCG RPD_2222 2488749 - 2487997 - | short-chain dehydrogenase/reductase SDR RPD_2223 2488858 - 2489172 + | regulatory protein, ArsR RPD_2224 2490024 - 2489305 - | YgfB and YecA TERM 1970 2489389 - 2489425 + g 74 -10 -3.78953 | gap 1 TTTGCGCGTCGCGGG CGG-CGGTCCCCATGCG ATCT CGCGGGGGGCCCGGTCG TTTGCTAATCGCCAT RPD_2225 2490303 - 2490653 + | hypothetical protein TERM 1971 2490875 - 2490888 + G 74 -2.4 -4.7497 | GGGGGAGCTACTAGG CGAA ATGCAA TTCG TTTTTCCTCCCTACG RPD_2226 2490663 - 2491073 + | transcriptional regulator TERM 1972 2491278 - 2491262 - T 81 -7.2 -4.42062 | GATTCTTCAAAGAAA GCACCG AGACG CGGCGC AGGCCAAATTCTTCT TERM 1973 2491797 - 2491778 - T 100 -16.4 -5.27335 | opp_overlap 2491771 2491778 TCTCCCAAACAAAAA CCCCGGCG TCTC CGCCGGGG TTCTGCATTCTGATA TERM 1974 2491778 - 2491797 + T 89 -16.4 -3.45768 | opp_overlap 2491778, overlap 2491771 TCTCCCAAACAAAAA CCCCGGCG TCTC CGCCGGGG TTCTGCATTCTGATA groEL 2493482 - 2491839 - | chaperonin GroEL groES 2493959 - 2493642 - | co-chaperonin GroES TERM 1975 2493840 - 2493858 + g 72 -5.2 -4.4078 | overlap 2493842 CGGGCCAACGGCGAC GATTTCGC CCT GCGAAGGC TTTTCCTTGGCCGAG TERM 1976 2494150 - 2494136 - H 73 -12.8 -3.23216 | opp_overlap 2494145 GCCGACCAGGATTAA CGCCGC CCC GCGGCG GGGCCTCAGGATTCA RPD_2229 2494300 - 2494584 + | hypothetical protein RPD_2230 2494661 - 2494924 + | hypothetical protein RPD_2231 2494925 - 2495626 + | hypothetical protein RPD_2232 2496882 - 2495632 - | Na+ dependent nucleoside transporter-like TERM 1977 2497163 - 2497118 - g 76 -14.9 -3.09834 | gap 2 CAGGTGACCAGCGAA CCCGCTCGGATCGCCGAGCGC GCGCAG GCGCTCG-CGATC-GAGCAGA GCGTCGAATGCCCGC RPD_2233 2497073 - 2498176 + | ribulose-bisphosphate carboxylase-like protein; rubisco-like protein RPD_2234 2498166 - 2498645 + | cupin 2, barrel RPD_2235 2499433 - 2498669 - | short-chain dehydrogenase/reductase SDR RPD_2236 2500053 - 2499511 - | GCN5-related N-acetyltransferase TERM 1978 2500114 - 2500158 + r 100 -9.2 -4.83169 | gap 1, overlap 2500117 2500117 CCCCGGAATGAGGTG TGAGG-TGGGCGCAGCGCTGC GTCC GCAGCGCGGCGTCAGGCCTGA TTTTTGTACGGCGGT RPD_2237 2500895 - 2500149 - | putative proteasome-type protease RPD_2238 2501972 - 2501148 - | transglutaminase-like TERM 1979 2502026 - 2502067 + r 77 -2.2 -5.03314 | gap 1, overlap 2502026 2502027 CGGACTATATCAGGC T-CGGGCGCGACGGCGTTT GGTCG AATCGCGGTTGTGCGCGCA TTTTTTGGGCGTGCA RPD_2239 2503069 - 2502125 - | hypothetical protein TERM 1980 2503168 - 2503111 - R 100 -22.1 -3.72576 | gap 1, opp_overlap 2503116, overlap 2503112 2503114 2503160 TGCTTCGCCATCAAA CCACAATCGTCATTCCGGG-GCGCGCGC ATC GCGCGCGAACCCGGAATAACGGCTGTGC TGGTGGCATGACGTA TERM 1981 2503167 - 2503112 - R 100 -25.6 -2.83403 | gap 1, opp_overlap 2503116, overlap 2503111 2503114 2503160 GCTTCGCCATCAAAC CACAATCGTCATTCCGGG-GCGCGCGC ATC GCGCGCGAACCCGGAATAACGGCTGTG CTGGTGGCATGACGT TERM 1982 2503165 - 2503114 - R 100 -22.4 -2.96695 | gap 1, opp_overlap 2503116, overlap 2503112 2503111 2503160 TTCGCCATCAAACCA CAATCGTCATTCCGGG-GCGCGCGC ATC GCGCGCGAACCCGGAATAACGGCTG TGCTGGTGGCATGAC TERM 1983 2503116 - 2503163 + r 87 -17 -2.82834 | gap 1, opp_overlap 2503114 2503112 2503111 2503160 CGCCATCAAACCACA ATCGTCATTCCGGG-GCGCGCGC ATC GCGCGCGAACCCGGAATAACGGC TGTGCTGGTGGCATG RPD_2240 2504679 - 2503210 - | hypothetical protein RPD_2241 2504841 - 2505578 + | molybdopterin binding domain-containing protein RPD_2242 2505599 - 2506057 + | phenylacetic acid degradation-related protein TERM 1984 2506319 - 2506301 - gf 71 -13.1 -3.06696 | opp_overlap 2506310 GCGTCTCCGAACAGA CCGCCGC GCTCG GCGGCGG CACCGGCAAGGGGCT RPD_2243 2506030 - 2506548 + | xanthine-guanine phosphoribosyltransferase RPD_2244 2506558 - 2507226 + | hypothetical protein TERM 1985 2507281 - 2507223 - T 71 -8.7 -3.86015 | gap 1, overlap 2507224 2507227 GACGTCGCGCACAAA CTGACCACGTCATTCCGGG-ATGCGCGC CTTG GCGCGCAGGCCCGGAATCCCGAGGTTCA GGGCATCTCGGGATT TERM 1986 2507281 - 2507224 - T 77 -14.2 -2.91395 | gap 2, overlap 2507223 2507227 ACGTCGCGCACAAAC TG-ACCACGTCATTCCGGG-ATGCGCGC CTTG GCGCGCAGGCCCGGAATCCCGAGGTTCA GGGCATCTCGGGATT TERM 1987 2507277 - 2507227 - T 81 -16.1 -2.70354 | gap 1, overlap 2507223 2507224 TCGCGCACAAACTGA CCACGTCATTCCGGG-ATGCGCGC CTTG GCGCGCAGGCCCGGAATCCCGAGG TTCAGGGCATCTCGG RPD_2245 2508391 - 2507369 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RPD_2246 2508529 - 2509242 + | glutathione S-transferase-like TERM 1988 2509261 - 2509308 + F 72 -13.4 -2.79501 | gap 1 ATGCATGTACCTTAC TTTCGTCATTCCGGG-GCGCGCC GAA GGCGCGAACCCGGAATCCCGAGG TGTCCTGAACCTCTG RPD_2247 2509409 - 2510041 + | DSBA oxidoreductase RPD_2248 2510041 - 2511015 + | zinc-binding alcohol dehydrogenase RPD_2249 2511096 - 2511560 + | MaoC-like dehydratase RPD_2250 2511580 - 2512497 + | short-chain dehydrogenase/reductase SDR TERM 1989 2512512 - 2512542 + F 72 -11.7 -3.34222 | overlap 2512495 AGGTGAGGGGGCGCG GCCGCGGCCGCGC TTCGC GTTCGGCCGCAGC TTCTCGCCTCGTCAT TERM 1990 2512588 - 2512631 + F 81 -16 -2.71011 | gap 1 CAGTTCAGGGCATCT CGGGATTCCGGGTTCGCGACC GGC GGTCGCGC-CCCGGAATGACG TCGTTGCGGAGGGAT TERM 1991 2512924 - 2512968 + G 72 -11.5 -3.53811 | gap 3, opp_overlap 2512947 2512966 GCCGATGTCCTCGAA CGCTACGG-CG-CGG-CGCAGC AAAG GCTGCGGCCGGCGATCGAAGCG TTTCCGCCGGATGCG RPD_2251 2512726 - 2513970 + | HI0933-like protein TERM 1992 2514024 - 2513971 - T 70 -11.7 -3.19656 | gap 1, overlap 2513972 AAATCTACTGACTAA GTGTTCGTCATTCCGGGTTCGCTTGC TAC GCAAGCGC-CCTGGAATGACGGACTG AAAGACTGTTACTTC TERM 1993 2514023 - 2513972 - T 76 -15.2 -2.51312 | gap 1, overlap 2513971 AATCTACTGACTAAG TGTTCGTCATTCCGGGTTCGCTTGC TAC GCAAGCGC-CCTGGAATGACGGACT GAAAGACTGTTACTT RPD_2252 2515115 - 2514033 - | alanine racemase-like TERM 1994 2514440 - 2514468 + g 71 -3 -4.66833 | gap 1, overlap 2514441 AGGTGCCGGGACGAT GCTCGGTC-GCCC CCGC GAGCTGGCCGAGA TTTTTCAGGTTCGGC TERM 1995 2514575 - 2514555 - G 70 -4 -4.56597 | gap 2, overlap 2514556 2514557 CGCCTCGTCGAAAAA GCGCTGCGCC TGC GGC-CAGC-C GGTCTCGGTCGGATA RPD_2253 2516961 - 2515138 - | ABC transporter related TERM 1996 2515425 - 2515483 + g 77 -14.3 -3.37487 | overlap 2515426 2515473 AGGGCGCAGCGGATT TCGCAGCGCTCGCCTCGGCCGCGGCCT TCGCC GGGGCGCGGGTGAGGTCGGCGCCGCGC TGTTTCAGCATGTCG TERM 1997 2515426 - 2515482 + g 85 -17.8 -2.62171 | overlap 2515425 2515473 GGGCGCAGCGGATTT CGCAGCGCTCGCCTCGGCCGCGGCCT TCGCC GGGGCGCGGGTGAGGTCGGCGCCGCG CTGTTTCAGCATGTC TERM 1998 2516459 - 2516483 + g 74 -12.1 -3.55622 | opp_overlap 2516431, overlap 2516431 2516429 CTGATCATCACGATC GCGCTCTTGCG TTG CGCGAGATCGC TTTCCAGCCATTCGA RPD_2254 2517466 - 2516972 - | hypothetical protein RPD_2255 2517577 - 2518377 + | hypothetical protein RPD_2256 2518554 - 2519765 + | extracellular ligand-binding receptor TERM 1999 2519807 - 2519775 - T 81 -15.5 -3.02947 | opp_overlap 2519775 2519777 2519778 GATTGACGACACACA GCGGGATCGCCGGGC TTG ACCCGGCGATCCATC TTCTTCGCATGATGC TERM 2000 2519775 - 2519807 + T 85 -14.8 -3.66018 | opp_overlap 2519775, overlap 2519777 2519778 GATTGACGACACACA GCGGGATCGCCGGG CTTGA CCCGGCGATCCATC TTCTTCGCATGATGC TERM 2001 2519777 - 2519805 + T 89 -16 -3.40878 | opp_overlap 2519775, overlap 2519775 2519778 TTGACGACACACAGC GGGATCGCCGGG CTTGA CCCGGCGATCCA TCTTCTTCGCATGAT TERM 2002 2519778 - 2519804 + T 90 -19.5 -2.64045 | opp_overlap 2519775, overlap 2519777 2519775 TGACGACACACAGCG GGATCGCCGGG CTTGA CCCGGCGATCC ATCTTCTTCGCATGA RPD_2257 2522347 - 2519972 - | carbon-monoxide dehydrogenase TERM 2003 2520237 - 2520195 - G 70 -13.2 -3.02511 | opp_overlap 2520223 GTCATCGCCGGAATA TCCTCGGCGCGCGGCAGGGC GTA GTCCTGCAGCGAGCCGGTGA TCGGCTGGCCGTCGG TERM 2004 2521027 - 2520983 - G 82 -11.6 -4.07568 | gap 3, overlap 2521021 CTTGCGCTTCGAAAA GCCGGCGTAGTCCGC-CA-GC TCCAGC GCGTGAGCGAAC-ACGCCGGC GAAGTCGCCGCAATC TERM 2005 2523366 - 2523382 + G 70 -10.8 -3.53012 | overlap 2523369 TGATCGACGAGGTCA CGGCGC ATGTC GCGCCG TTTGCCGCCGAGCAC RPD_2258 2522774 - 2523751 + | Ppx/GppA phosphatase RPD_2259 2523819 - 2524526 + | ribosomal RNA methyltransferase RrmJ/FtsJ RPD_2260 2526557 - 2525043 - | major facilitator transporter TERM 2006 2525095 - 2525114 + g 100 -12.8 -5.14965 | TCGCTCGCCGTCTTG GCCGCGGC GCCG GCTGCGGC TTTTTTGCTCGAGAT TERM 2007 2526093 - 2526054 - G 70 -10.6 -3.57406 | overlap 2526052 2526066 GTGCCACGAGAAATA GGTGGTGATGAAGCCGCC GAGC GGCGGCCCGATCACCGGC CCGATCAGCGCGGGC RPD_2261 2526669 - 2526917 + | hypothetical protein TERM 2008 2527050 - 2527074 + G 74 -14.9 -3.01712 | TGGGAGCCGATCGGA GCCGTGCCGCG CTC CGAGGCGCGGC TGTTGGCGCAGGCGA RPD_2262 2526972 - 2527292 + | hypothetical protein RPD_2263 2527276 - 2527941 + | hypothetical protein RPD_2264 2528129 - 2529625 + | inositol-5-monophosphate dehydrogenase TERM 2009 2529737 - 2529696 - f 70 -12.3 -3.13899 | gap 1, overlap 2529694 2529698 2529700 AAGTTGTTATCAAGA GAGATTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAATGAC GAACGCGGACTGGGT TERM 2010 2529735 - 2529698 - f 76 -13.5 -3.12895 | gap 1, overlap 2529696 2529694 2529700 GTTGTTATCAAGAGA GATTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAATG ACGAACGCGGACTGG TERM 2011 2529733 - 2529700 - f 86 -16.1 -3.12449 | gap 1, overlap 2529698 2529696 2529694 TGTTATCAAGAGAGA TTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAA TGACGAACGCGGACT RPD_2265 2529876 - 2530901 + | zinc-binding alcohol dehydrogenase RPD_2266 2530882 - 2531715 + | hypothetical protein RPD_2267 2531747 - 2532169 + | hypothetical protein TERM 2012 2532813 - 2532775 - g 77 -15.4 -3.05384 | opp_overlap 2532769 GGGCTGCGGATCGAA CTCGGCGCCG-ACGCCCG CAATC CGGGCGTGCAG-GCCGAG CAGGACTTCATCAAG RPD_2268 2532202 - 2533506 + | Fmu (Sun) TERM 2013 2534713 - 2534747 + G 72 -5.7 -4.36914 | overlap 2534715 TTGTTCATCGACGTG TTCGACGCCG-AGGCCA AGG TGGTCGGCGGCG-CGGA TTTTCTGGCGCAGGG guaA 2533666 - 2535336 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2014 2535504 - 2535537 + T 100 -10.3 -5.03314 | opp_overlap 2535507 GCCAAATTTTCCGAA GTACCGTCATGGCCG ATGG TGCTCGTGACGGTAC TTTTTTCCACATAAC TERM 2015 2535696 - 2535682 - T 82 -11.4 -4.07786 | GATAAAATCTACAAA GTCGCG GAT CGCGAC GGCATGTACGTTCGC TERM 2016 2537659 - 2537686 + T 78 -10.6 -4.00038 | gap 1, opp_overlap 2537653 CATAATTGAGGGAGA GGCCGAAGGTGCC CTT GGCATC-TCGGTC TTTCTGCTCGTCATC RPD_2273 2538502 - 2537864 - | hypothetical protein TERM 2017 2538748 - 2538799 + r 90 -13.7 -4.08546 | gap 1, opp_overlap 2538735 2538733, overlap 2538794 GAGTCGGCAAGCCGC CGATGGCGGGGCGCCGCTGCGA AATTTGAGG TCTCCGCGCCGC-CCGCCATCG TTTATGGTTGGTCCT RPD_2274 2539067 - 2538801 - | conjugal transfer TraD RPD_2275 2539401 - 2539069 - | hypothetical protein TERM 2018 2539335 - 2539345 + g 75 -4.6 -4.63218 | CCTTGCGGGTTTTGA GGTC TCT GGCC TTTTCTTCCAGCGCC TERM 2019 2539650 - 2539689 + G 81 -11.3 -4.07568 | CGCCTACCGCTCGGC GTCGCGGCTGCGCGACG ACCGGC TGGAGCGCAGCCACGAC TTTTCGGCGAAGCGC TERM 2020 2540286 - 2540308 + G 71 -9 -3.7614 | GATGCACCGCGAGAT TGCGCGCGGC AAC GGCGAGCGCA TTGTTGCTGATCCTT RPD_2276 2539567 - 2542587 + | MobA/MobL protein RPD_2277 2542706 - 2542921 + | prophage CP4-57 regulatory RPD_2278 2543178 - 2543468 + | transposase IS3/IS911 RPD_2279 2544050 - 2543646 - | hypothetical protein RPD_2280 2545107 - 2544190 - | transcriptional regulator-like RPD_2281 2545697 - 2545104 - | hypothetical protein TERM 2021 2545384 - 2545355 - G 76 -15.7 -2.82933 | TCGTAATGCACGACA GCACCGGCACCGC AAGC GCAGCGCCGATGC CCGTGGCAAGGACGA TERM 2022 2545646 - 2545666 + g 72 -6.7 -4.28361 | overlap 2545647 2545663 GATCCAGCGCAATTC CCGAGTGCC AGC GGCCCTCGA TTTTGATCGGATTGA TERM 2023 2545823 - 2545796 - R 73 -8.3 -4.07568 | opp_overlap 2545798, overlap 2545778 2545798 GGCTGCTCGGGAAAA CACGCCTGAGG CCTTAT CCTCCGGCGGG AGGAAGCTGAGCAGG RPD_2282 2546719 - 2545778 - | antirestriction protein; ArdC RPD_2283 2547426 - 2546920 - | hypothetical protein TERM 2024 2547868 - 2547844 - g 71 -2.7 -4.63218 | overlap 2547828 GGCTTTTCAAGAAAA GCGATGAGCGT CTG ATGTGCATCGC GGGCATCTGGCGCGA RPD_2284 2547486 - 2548076 + | hypothetical protein TERM 2025 2548978 - 2548998 + G 71 -3.1 -4.68908 | GGCCTCGCGAAAATC GACGTCCAG AAC CAGGTTGTC TTTGTTTTCGATAAC RPD_2285 2548132 - 2549448 + | hypothetical protein TERM 2026 2549840 - 2549864 + G 72 -11.4 -3.55622 | GCTGTCCGATATTCT CGTGATCGGC TATCC GCCGATCCCG TTTACGACGATTCCG RPD_2286 2549448 - 2550506 + | hypothetical protein TERM 2027 2550782 - 2550796 + G 70 -11.4 -3.41978 | opp_overlap 2550771 2550772 AAAAGGACGATGAGT CCGACG GCT CGTCGG TTGCTCTTCGTCTTA RPD_2287 2550620 - 2550907 + | hypothetical protein TERM 2028 2551024 - 2551011 - g 70 -5.9 -4.24963 | overlap 2551012 GAGAACTATCGAAAA CCGCC CAAG GGCGA GCCGTTGCCATCAGT TERM 2029 2551887 - 2551877 - g 86 -6.8 -4.87291 | TACGCGAACCAAAAA GCAC ACC GTGC CGACCGAAGTAAACG RPD_2288 2550900 - 2552528 + | hypothetical protein RPD_2289 2554171 - 2552543 - | superfamily I DNA/RNA helicase-like protein RPD_2290 2556282 - 2554273 - | ATP-dependent OLD family endonuclease RPD_2291 2556737 - 2557174 + | hypothetical protein RPD_2292 2558232 - 2557198 - | patatin RPD_2293 2558639 - 2558229 - | hypothetical protein RPD_2294 2559928 - 2558681 - | hypothetical protein RPD_2295 2560110 - 2560430 + | transcriptional regulator RPD_2296 2560427 - 2561350 + | hypothetical protein RPD_2297 2561370 - 2562002 + | hypothetical protein TERM 2030 2562913 - 2562925 + G 74 -10.5 -3.80573 | opp_overlap 2562886 2562883 CTACGAGGCGGCTCT CGCCG ATC CGGCG TTTGCTGATACTCCG RPD_2298 2562005 - 2563999 + | tetratricopeptide TPR_2 TERM 2031 2564006 - 2564027 + T 83 -7.3 -4.56597 | TCGCTGTAACTCTTG CTATCGTCG TTCT TGACGGTAG TTTTTACAGGCCAAG TERM 2032 2564296 - 2564314 + T 81 -6.7 -4.81685 | gap 1, opp_overlap 2564296, overlap 2564289 2564287 2564286 ATGATGCACGAAGAA GCCCAACC AATC GGT-GGGC TTTTTCATGGTTGGT TERM 2033 2564348 - 2564385 + T 73 -11.3 -3.59738 | gap 1, overlap 2564352 TGCTACGCGTTGCAG CCTAAGGCGGGTTAGCGC CGC GCG-TAACCCGCCGTGAG TTTCGGACTCTACTG RPD_2299 2565329 - 2564406 - | hypothetical protein RPD_2300 2567240 - 2566056 - | acetylornithine and succinylornithine aminotransferases RPD_2301 2568502 - 2567237 - | 5-aminolevulinate synthase TERM 2034 2568022 - 2568035 + g 75 -9.5 -4.07568 | opp_overlap 2568031 CGCGCCAGTCGTTAT GCGCG AACA CGCGC TTTTCCGCGCCCGAG RPD_2302 2569365 - 2568499 - | pyridoxal kinase RPD_2303 2570627 - 2569362 - | benzoate transporter RPD_2304 2570747 - 2572174 + | regulatory protein GntR, HTH TERM 2035 2573063 - 2573085 + G 100 -12.6 -4.79352 | opp_overlap 2573062 2573064, overlap 2573064 TCGACCACGCATAAG ACGCTGCGCG GCC CGCGCGGCGG TTTTGTTCTGACTAA TERM 2036 2573064 - 2573084 + G 85 -16.1 -3.46888 | opp_overlap 2573062 2573064, overlap 2573063 CGACCACGCATAAGA CGCTGCGCG GCC CGCGCGGCG GTTTTGTTCTGACTA TERM 2037 2573084 - 2573064 - g 75 -13.9 -3.25896 | opp_overlap 2573064 2573063, overlap 2573062 CGACCACGCATAAGA CGCTGCGCG GCC CGCGCGGCG GTTTTGTTCTGACTA RPD_2305 2572328 - 2573632 + | serine hydroxymethyltransferase TERM 2038 2574355 - 2574406 + G 75 -4.9 -4.63218 | CGAGGAGGGCGCGAA CGTGGTGCGGGTCGGACAGGC CATCTTTGGC GCCCGCCCGACCAGCGATGCG TTTTATTGGCCGGGG RPD_2306 2573651 - 2574466 + | hypothetical protein RPD_2307 2575009 - 2574611 - | Cu(I)-responsive transcriptional regulator TERM 2039 2574968 - 2574983 + g 76 -6 -4.46212 | overlap 2574970 GTAACGAATGGTCTT GGCCGG CAAT CCGGAC TTTTCTGATGCGGCG RPD_2308 2577646 - 2575121 - | heavy metal translocating P-type ATPase TERM 2040 2575532 - 2575553 + g 75 -13 -3.37344 | GACGAAGGTGACAGT GCGGCTGC CGTCCC GCAGCCGC TTGATTGCGTCGACC TERM 2041 2578080 - 2578043 - g 75 -13.6 -3.48276 | GCCGTTTTCACACAA GCACTTGA-AGTGGCGGG CTAC CCCGCCACTGTC-AGCGC CGCGTAATAGCGATA RPD_2309 2577884 - 2578087 + | heavy metal transport/detoxification protein RPD_2310 2581480 - 2578292 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 2042 2580829 - 2580839 + g 70 -2.4 -4.64334 | CGACCGAACCGGCTG CGAC CTG GACG TTTTGTTCGCGAATT RPD_2311 2582718 - 2581477 - | secretion protein HlyD TERM 2043 2582203 - 2582169 - G 70 -8.5 -3.92324 | gap 1, opp_overlap 2582184, overlap 2582170 GGCGTGAATAGGAAA GGTCGAGCGCGGCAGC GGCT ACTGCAGCTCTCG-CC TCCAGCATCTGCGCT TERM 2044 2582388 - 2582331 - G 75 -12 -3.7511 | overlap 2582326 CTTGTGAGAACAGAA CCTCGGCCCGTTGCAG-CCGCGCTTCCG CATT CTGCAGCGCGATCTCGAACG-GCCGAGG ATCGATCTGAAACAG RPD_2312 2583729 - 2582974 - | uroporphyrin-III C-methyltransferase RPD_2313 2585090 - 2583729 - | cobyrinic acid a,c-diamide synthase TERM 2045 2584376 - 2584334 - G 72 -15 -2.70932 | gap 3, overlap 2584360 GCCCGGGTGGAACGA GCGGCCGCAGCGTCGGCGCAT CGAA ACGCGCCG--GCTGCG-CCGC GCGGATCAGCGCGTC TERM 2046 2584379 - 2584360 - G 75 -11.4 -3.64703 | gap 1, overlap 2584334 GTCGGCGCATCGAAA CGCGCCGGC TGC GCC-GCGCG GATCAGCGCGTCGAG TERM 2047 2584830 - 2584805 - G 79 -16.1 -2.98823 | CTTCGGTGATACACA GCTCGGCGCCG GCTG CGGCGTCGAGC AGCGCCGCGATCCGG RPD_2314 2585856 - 2585077 - | precorrin-4 C11-methyltransferase RPD_2315 2586245 - 2585853 - | cobalamin biosynthesis protein G; CbiG RPD_2316 2587351 - 2586242 - | precorrin-6y C5,15-methyltransferase, subunit CbiE TERM 2048 2587852 - 2587877 + G 91 -16.1 -3.87994 | CTCAGGCCGCAGATG CGCTCGGCGCG CAGC CGCGCCGGGTG TTTCTCGGCATCGGT RPD_2317 2587497 - 2588246 + | cobalt-precorrin-6x reductase RPD_2318 2588974 - 2588213 - | precorrin-3B C17-methyltransferase TERM 2049 2588337 - 2588375 + g 74 -15.3 -2.56914 | gap 1, overlap 2588335 GCGCGGCTCCCAACC GCCTCGCCGAGCGCAACG ACAT CGATGCGCTCG-CGAGGA TCGCTTACTGCGGTC RPD_2319 2589699 - 2588971 - | precorrin-2 C20-methyltransferase cobH 2590325 - 2589696 - | precorrin-8X methylmutase RPD_2321 2590909 - 2590322 - | hypothetical protein RPD_2322 2592496 - 2591366 - | citrate utilization protein B RPD_2323 2593781 - 2592483 - | tricarballylate dehydrogenase TERM 2050 2592884 - 2592855 - G 90 -17.9 -3.54424 | gap 1 CGTGATCGGCGGAAA CGC-GGACGGCGCG GCG CGCGCCATCCCGCG CGCATCGAGAATGAG TERM 2051 2594507 - 2594532 + G 75 -13.3 -3.36452 | gap 1 TCTGGCATCCGGCCC CGCCA-CGCGCG GAC CGCGCGATGGTG TTCGTGTTCGCGGGT RPD_2324 2594293 - 2595405 + | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase RPD_2325 2595402 - 2596178 + | cobalamin 5'-phosphate synthase RPD_2326 2596247 - 2597008 + | precorrin 6A synthase TERM 2052 2597051 - 2597081 + T 72 -14 -2.70003 | overlap 2597050 2597049 GGTGATGCGCGCTCA GCCCCAGCTCTGCA GCT TGCGGAGTTGCGGC GTCTTCTTGTGCTGG RPD_2327 2598526 - 2597048 - | pyruvate kinase RPD_2328 2598754 - 2599101 + | hypothetical protein RPD_2329 2599330 - 2600085 + | ABC transporter related RPD_2330 2600078 - 2600824 + | ABC transporter related RPD_2331 2600864 - 2601739 + | inner-membrane translocator RPD_2332 2601741 - 2602715 + | inner-membrane translocator TERM 2053 2602724 - 2602762 + T 100 -26.9 -2.52795 | gap 1 GCTGTAAGGGCCTGA GC-CGAGCTTCGCGCCGC CATG GCGGCGCGAAGCTCGCGC TGCCTTCGGGCAATT TERM 2054 2603042 - 2602991 - T 100 -19.6 -4.13304 | overlap 2602995 AAACGAGCCCGAAAA GCAATTCGCCGCGTCGGTTCTG GGGCAAAT CAGAACCGACGCGGCGAACCAT CGAGACGTTGTGAAG TERM 2055 2603038 - 2602995 - T 100 -27 -3.67622 | overlap 2602991 GAGCCCGAAAAGCAA TTCGCCGCGTCGGTTCTG GGGCAAAT CAGAACCGACGCGGCGAA CCATCGAGACGTTGT RPD_2333 2605623 - 2603101 - | hypothetical protein TERM 2056 2603299 - 2603344 + g 85 -13.2 -4.09864 | gap 1 GGGCGGAGCCGCAAC CTCTTCGGTTGCGTGCGGCGC GGGAG GCGCCGC-CTCGGCCGGTGAG TTTTCGCCGCTGGAT TERM 2057 2603356 - 2603368 + g 70 -4.1 -4.56775 | TGAGTTTTCGCCGCT GGATC CGT GATTC TTTTTCCCGAGAAAT TERM 2058 2603541 - 2603561 + g 72 -11.8 -3.59262 | overlap 2603530 CCATCTGCTTGCGCT CCGGCTCG GCGCG CGGGCCGG TTTCGGCATCTGCGA TERM 2059 2605252 - 2605225 - G 73 -13.6 -3.28924 | gap 1, overlap 2605245 GATGGTGCCGGAGAA GATCGCGA-GTTC CAG GAACATCGCGATC ACCCAGGCGAGCCCG TERM 2060 2606230 - 2606252 + G 78 -6.2 -4.62302 | overlap 2606251 TTCGCTACTTTCGAG CCTTTCTGCC CAG GGAGGAGAGG TTTTTCGACCTGTTC RPD_2334 2606211 - 2606855 + | hypothetical protein TERM 2061 2607468 - 2607482 + G 73 -3.5 -4.66537 | opp_overlap 2607451 CCCAGAAGACCATGG GCATC ATCGC GGTGC TTTTGTATTCGCAGG RPD_2335 2606870 - 2607880 + | phosphate transporter RPD_2336 2608415 - 2608101 - | small multidrug resistance protein RPD_2337 2608618 - 2610243 + | peptide chain release factor 3 TERM 2062 2610280 - 2610300 + F 71 -12.6 -3.01637 | TTCCATGACCAGTCA TTGCCGGG CTTGA CCCGGCAA TCTATCCTCTTCATC RPD_2338 2610357 - 2610695 + | hypothetical protein RPD_2339 2610904 - 2612463 + | hypothetical protein RPD_2340 2612881 - 2612477 - | integral membrane protein RPD_2341 2613736 - 2612912 - | NmrA-like TERM 2063 2612986 - 2612964 - G 82 -11.9 -4.10657 | GCATAGTCGGCAAAA GCGCGCGGC GGACG GCCGAGCGC CCGCGCGACGCCGTC RPD_2342 2613835 - 2614485 + | regulatory protein, TetR TERM 2064 2615181 - 2615158 - g 73 -5.9 -4.30576 | opp_overlap 2615140 2615138 2615178 GCCGGAGCAGGAAAA GCACTGGGG TCTGTT CTCCAGCGC AATGCACTATCTCGG RPD_2343 2614703 - 2615428 + | hypothetical protein TERM 2065 2615546 - 2615536 - f 71 -4.6 -4.52589 | overlap 2615538 CGGCGTGACACAAAA GCCA CGA CGGC CTCCAATCGCGTCGC TERM 2066 2616752 - 2616766 + G 91 -12.8 -4.1891 | GTGCTGCCGGTGTTT GGCGCG CCG CGCGCC TTTGTGTTCGCGCCG RPD_2344 2615672 - 2617006 + | hypothetical protein RPD_2345 2617018 - 2618763 + | hypothetical protein TERM 2067 2618775 - 2618763 - f 74 -10.5 -3.75817 | overlap 2618761 GGCGCAGAAGAAATA GGCGC TGT GCGCC GCCGATCGGAGATCA TERM 2068 2619671 - 2619625 - g 77 -13.4 -3.53444 | CGACCGTCCGTGAAA GCCGGGCTCGCCGCGGTCGGCG TCA CGCCGAGCGCGGTGCTGCCGCC GTTCCAGGGCGCCGT TERM 2069 2620256 - 2620287 + G 70 -6.5 -4.21194 | gap 1 TGCTCGGCTCGCTGG TCGCGGCGCTGCTG CTGAT CGCCGGCGC-GCGA TTTTCGCTGATCGCC TERM 2070 2620974 - 2621007 + G 71 -12.5 -3.25823 | opp_overlap 2620978, overlap 2620961 2620959 2620978 CGTCGCGGCGCGGAT CGAATCCGCGTCGAA GAGT TTCGGCACGGATTTG TTAGTCTCCGAAGAC TERM 2071 2620978 - 2621003 + G 80 -9.7 -4.29106 | opp_overlap 2620978, overlap 2620961 2620959 2620974 GCGGCGCGGATCGAA TCCGCGTCGAA GAGT TTCGGCACGGA TTTGTTAGTCTCCGA RPD_2346 2619049 - 2621331 + | CHASE2 RPD_2347 2622860 - 2621445 - | multi-sensor signal transduction histidine kinase TERM 2072 2621844 - 2621819 - G 95 -14.7 -4.25104 | CCTTGTCGACCAAAA CGCGATCGACC GCGG GGGCGATCGCG AGTTCGACGTCGACC TERM 2073 2621985 - 2622009 + g 73 -13.6 -3.28712 | gap 1, opp_overlap 2621958, overlap 2621962 2621985 CTGGATCACCTCGCC GG-CGCGCAGC GTCT GCTGCGCGGCC TTGTCCAGCGCCGCG TERM 2074 2623019 - 2623001 - R 76 -10.2 -3.93383 | GCAAGACACATGAAA TCCCGCGG AAG CAGCGGGA AGGGCTGCCACTTTA RPD_2348 2623980 - 2623195 - | hemin importer ATP-binding subunit RPD_2349 2625062 - 2623977 - | transport system permease protein RPD_2350 2626030 - 2625059 - | periplasmic binding protein TERM 2075 2625524 - 2625563 + g 73 -13.7 -3.16564 | opp_overlap 2625520 2625519 CTGCTCGAAATCCTC CGCC-ACGGCGGTCGCAAG ACAT TTTGCGGCCGC-GTCGGCG TTCATCACGTGGCCG RPD_2351 2626236 - 2626027 - | hypothetical protein TERM 2076 2627594 - 2627575 - g 71 -12.1 -3.33261 | GTTCAACCGCTACAA CGCCGCG ATCAAG CGCGGCG TCACGTGTCTGCCGT TERM 2077 2627934 - 2627952 + G 72 -11.7 -3.59979 | GGATCGGCAATTTGA CCAGCGG CCTGT CCGCTGG TTTGCAGTCCGCGAC RPD_2352 2626562 - 2628004 + | coproporphyrinogen III oxidase RPD_2353 2628066 - 2628737 + | NmrA-like TERM 2078 2630520 - 2630555 + G 76 -14.6 -3.07962 | gap 1, overlap 2630545 2630546 2630549 TCACCGAGACGCTGA TCGCGGGCTCGCACGCC ACC GGCG-GCGGGCCGGCGC TGTTCGCCTGTGCGG RPD_2354 2628950 - 2631286 + | TonB-dependent haem/haemoglobin receptor RPD_2355 2631279 - 2631695 + | antibiotic biosynthesis monooxygenase RPD_2356 2631716 - 2632243 + | hypothetical protein TERM 2079 2632284 - 2632256 - g 75 -9.6 -4.07885 | gap 2, opp_overlap 2632267 TAGGCCGCGCCAAAA CGGCGG-GA-CACG TGG CGCGCTCGCCGCCG CGTGGCTGGCGGCCG RPD_2357 2632236 - 2633033 + | MotA/TolQ/ExbB proton channel RPD_2358 2633043 - 2633480 + | biopolymer transport protein ExbD/TolR RPD_2359 2633477 - 2634313 + | TonB-like RPD_2360 2635138 - 2634347 - | regulatory proteins, IclR RPD_2361 2635313 - 2636464 + | extracellular ligand-binding receptor TERM 2080 2636514 - 2636478 - f 71 -12.9 -3.08133 | GATCCATCGACCGAA TTGGCCTCGCGACCGGC TCG ACCGGTCGCGAGGAGGA AAGAGAGCGGCATCA TERM 2081 2636743 - 2636762 + G 79 -3.5 -4.9792 | overlap 2636745 CGGCGCTCCTCATCA TGGCGCT GTTCGG AGCGCTG TTTTTCTGTGCCGTC RPD_2362 2636529 - 2637404 + | inner-membrane translocator RPD_2363 2637409 - 2638386 + | inner-membrane translocator RPD_2364 2638383 - 2639120 + | ABC transporter related TERM 2082 2639539 - 2639572 + G 82 -5.9 -4.71426 | gap 1, opp_overlap 2639534, overlap 2639542 GAACAGCAGATGCTC GCGATCGGGCGCGC GCTGATG GCGCGGCCGAA-GC TTTTGTTGCTCGACG RPD_2365 2639107 - 2639814 + | ABC transporter related RPD_2366 2639835 - 2641151 + | aminotransferase class-III TERM 2083 2641800 - 2641834 + G 70 -13.5 -3.03635 | gap 1 CGCGGCGATGGTCGG CGCGGCGCATCTCGGC GAAC GCCGCG-TGCGCCGCC TGTTCGGGGAGTTTG RPD_2367 2641306 - 2642898 + | 5-oxoprolinase (ATP-hydrolyzing) RPD_2368 2642910 - 2644952 + | 5-oxoprolinase (ATP-hydrolyzing) RPD_2369 2645779 - 2645423 - | hypothetical protein RPD_2370 2645785 - 2647998 + | flagellin RPD_2371 2648071 - 2648637 + | hypothetical protein TERM 2084 2648644 - 2648677 + F 71 -12.5 -3.02043 | overlap 2648646 GCTGGCTAGTTGCGT GAATCGTCATCGCCA AAAT TGGGGATGACGACTC TCTTCGGCCAAACTT RPD_2372 2648768 - 2649514 + | regulatory protein, LuxR TERM 2085 2650368 - 2650382 + G 70 -10 -3.75153 | opp_overlap 2650366 2650381 GCCCCGCCGAAATTG CGCTTC GAA GAAGCG TTTCCATTGGAACGA RPD_2373 2649869 - 2650477 + | regulatory protein, LuxR RPD_2374 2651767 - 2650805 - | beta-lactamase-like RPD_2375 2652083 - 2652514 + | thioredoxin-related RPD_2376 2652637 - 2653218 + | cytochrome c family protein RPD_2377 2653481 - 2655760 + | ATP-binding region, ATPase-like TERM 2086 2656762 - 2656782 + G 72 -11.8 -3.53224 | opp_overlap 2656756 GGCCAGGAAGTCGTC GCCGCCGT TCAGC GCGGCGGC TTTACGGCGACGGTG RPD_2378 2655841 - 2657568 + | TrkA-N TERM 2087 2658520 - 2658532 + F 74 -10.5 -3.75169 | overlap 2658529 GGAACAGGGTGCGCT CCGGC ACG GCCGG TTTGGTGACATCATC TERM 2088 2658643 - 2658625 - f 90 -8.1 -4.89567 | CCTGAAAACACAAAA CCGCGCT GTGCA AACGCGG TGGTACCAGTTTTCG TERM 2089 2659803 - 2659813 + G 76 -8.2 -4.28018 | overlap 2659796 GATCAGGCGACGCTG CGCC ACC GGCG TTTTCCTGAGGTGTT RPD_2380 2658828 - 2660144 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPD_2381 2660157 - 2660531 + | hypothetical protein TERM 2090 2660919 - 2660874 - g 77 -16.7 -2.62983 | opp_overlap 2660871, overlap 2660909 TGGATTGTCACAGCA CGGCGACGGCCGCCGCCGCGA TGTA TCGCAGCGAAGGCCGCAGCCT CGACAGCCAGCCTGC RPD_2382 2660672 - 2661145 + | thioesterase superfamily protein TERM 2091 2661825 - 2661811 - f 70 -10 -3.66178 | opp_overlap 2661811 GCGGCGAATGTGAAA GCGTTC AAG GAACGC TAGTTCGCCGCGCCA RPD_2383 2662006 - 2662641 + | transcriptional regulator PadR-like RPD_2384 2662843 - 2663457 + | 4-hydroxybenzoyl-CoA thioesterase RPD_2385 2663451 - 2663720 + | hypothetical protein RPD_2386 2663804 - 2664289 + | hypothetical protein TERM 2092 2664337 - 2664356 + G 75 -7 -4.4017 | opp_overlap 2664337 2664332, overlap 2664352 AGCGAAAGCAGAGGA CGGAGCGT TAAG GCGCGCCG TTTTCTCGGCGTTGC RPD_2387 2664308 - 2664772 + | hypothetical protein RPD_2388 2665167 - 2664778 - | hypothetical protein RPD_2389 2665335 - 2667182 + | ABC transporter related RPD_2390 2667507 - 2667247 - | hypothetical protein RPD_2391 2668063 - 2668218 + | antenna complex, alpha/beta subunit RPD_2392 2668231 - 2668428 + | antenna complex, alpha/beta subunit TERM 2093 2668437 - 2668469 + F 100 -19.9 -3.58726 | opp_overlap 2668428 2668425 GAAGTAGTCGACCTC GGAAGCGGCGTCCTC TCC GGGAACGCCGCTTCC TTGTCTCTCGACAGA RPD_2393 2668723 - 2669241 + | response regulator receiver TERM 2094 2669739 - 2669783 + T 100 -23.8 -2.80816 | gap 1, opp_overlap 2669741 2669743 2669746, overlap 2669746 CAGGCGCCGCCATGA C-ACACAAGCAGCCTCCCCGA AAGG TCGGGGAGGCTGCTTGTGCCG TGTAGTAACTCGGGA TERM 2095 2669780 - 2669741 - T 100 -31 -2.78384 | opp_overlap 2669739 2669746, overlap 2669743 2669746 GGCGCCGCCATGACA CACAAGCAGCCTCCCCGA AAGG TCGGGGAGGCTGCTTGTG CCGTGTAGTAACTCG TERM 2096 2669778 - 2669743 - T 100 -27.8 -2.94099 | opp_overlap 2669739 2669746, overlap 2669741 2669746 CGCCGCCATGACACA CAAGCAGCCTCCCCGA AAGG TCGGGGAGGCTGCTTG TGCCGTGTAGTAACT TERM 2097 2669775 - 2669746 - T 100 -23.7 -3.61902 | opp_overlap 2669739 2669746, overlap 2669743 2669741 CGCCATGACACACAA GCAGCCTCCCCGA AAGG TCGGGGAGGCTGC TTGTGCCGTGTAGTA TERM 2098 2669746 - 2669775 + T 100 -23.7 -3.35438 | opp_overlap 2669746 2669743 2669741, overlap 2669739 CGCCATGACACACAA GCAGCCTCCCCGA AAGG TCGGGGAGGCTGC TTGTGCCGTGTAGTA RPD_2395 2670276 - 2669839 - | hypothetical protein RPD_2396 2670626 - 2670336 - | hypothetical protein RPD_2397 2671300 - 2670638 - | hypothetical protein RPD_2398 2672746 - 2671319 - | PUCC protein RPD_2399 2673115 - 2672936 - | antenna complex, alpha/beta subunit RPD_2400 2673283 - 2673128 - | antenna complex, alpha/beta subunit TERM 2099 2673303 - 2673292 - H 72 -2.2 -4.8048 | CTGCCATAGTAAAAA CCTC CTAA GAGA CTTTCGATATTGTCG TERM 2100 2673793 - 2673804 + G 72 -7.2 -4.25104 | AACATCCACTCGGAC CGCG TCTG CGCG TTTTCCTCGCGGACG RPD_2401 2673759 - 2674451 + | response regulator receiver RPD_2402 2674682 - 2676970 + | ATP-binding region, ATPase-like RPD_2403 2676970 - 2679300 + | ATP-binding region, ATPase-like TERM 2101 2679462 - 2679490 + G 70 -13 -3.04443 | overlap 2679474 CGCCGCCATCGCTAT GCCGACGACGGC TCGGC GCCGACGCCGGC TCTGATTCTTCTCGA RPD_2404 2679297 - 2679761 + | response regulator receiver TERM 2102 2680786 - 2680751 - g 79 -7.4 -4.52589 | GTGCCGGAGACAAAA GCCGGGTCCACGGAAA ATGC CTCCCGTCGTCTCGGC CTGCTCGGCATGCGC RPD_2405 2679758 - 2680888 + | response regulator receiver sensor signal transduction histidine kinase TERM 2103 2681151 - 2681174 + F 77 -13.2 -3.62046 | gap 1 GGCCGGGGGATGTTG CCGATCGGCTC CAG GAGCCG-TCGG TTGTTGAACCAGTCG RPD_2406 2681932 - 2682924 + | helix-turn-helix, AraC type RPD_2407 2683019 - 2683867 + | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase RPD_2408 2683875 - 2684768 + | ADP-ribosyl-(dinitrogen reductase) hydrolase TERM 2104 2684805 - 2684771 - f 100 -19.4 -3.55444 | opp_overlap 2684778, overlap 2684778 GCGCGACGCCTGAAA CAGCAAAGGCCTCGCA TCG CGCGAGGCCTTCACTG TCCGTCTCATTTGAT TERM 2105 2684778 - 2684798 + F 76 -14 -3.14026 | opp_overlap 2684778 2684771 GCCTGAAACAGCAAA GGCCTCGC ATCGC GCGAGGCC TTCACTGTCCGTCTC TERM 2106 2684798 - 2684778 - f 93 -14.7 -4.00532 | opp_overlap 2684778, overlap 2684771 GCCTGAAACAGCAAA GGCCTCGCA TCG CGCGAGGCC TTCACTGTCCGTCTC TERM 2107 2684955 - 2684914 - f 71 -11 -3.45571 | opp_overlap 2684920, overlap 2684908 GTGCTCAAACAGCAA GCTTAAGCGGAATGACTT GACGGT AAGTCATCCTGCTTTAGC GGCGATCGATCTCGA RPD_2409 2685312 - 2685677 + | hypothetical protein RPD_2410 2686033 - 2685758 - | type IV pilus assembly PilZ RPD_2411 2686445 - 2686104 - | hypothetical protein TERM 2108 2686256 - 2686305 + g 75 -13.4 -3.39327 | AGTGATCGGGATCAT CGGCGTTGGCGTGGCGGACGCC GCGCAG GGTGCCCGACACGGCGAAGCCG TTCTGGGTGTAGGAG TERM 2109 2686572 - 2686549 - R 84 -8.2 -4.46233 | gap 1, opp_overlap 2686553, overlap 2686545 2686538 TTAAGCCGAAAGAAA CACTTTCGCCG ACG CAGCGA-AGTG GGGCTTCGCGCCGGG RPD_2412 2687251 - 2686829 - | nickel responsive regulator RPD_2413 2687454 - 2689610 + | TonB-dependent receptor, plug RPD_2414 2690623 - 2692071 + | putative Omp2b porin TERM 2110 2692099 - 2692133 + T 84 -15.1 -3.37796 | gap 1, opp_overlap 2692092 2692105, overlap 2692105 CGCAAGGAGCGGTCT CG-GAAACCCCGGCGG GCAA TCGCCGGGGTTTTTCG TTGTGGATGGTCCGC TERM 2111 2692126 - 2692105 - T 83 -14.4 -3.53224 | opp_overlap 2692105 2692099, overlap 2692092 GAGCGGTCTCGGAAA CCCCGGCG GGCAAT CGCCGGGG TTTTTCGTTGTGGAT TERM 2112 2692105 - 2692126 + T 100 -15.1 -4.93968 | opp_overlap 2692092 2692105, overlap 2692099 GAGCGGTCTCGGAAA CCCCGGCGG GCAA TCGCCGGGG TTTTTCGTTGTGGAT RPD_2415 2694604 - 2692364 - | lytic transglycosylase, catalytic TERM 2113 2693796 - 2693783 - G 72 -5.2 -4.41348 | GTTGCCGTAAAGAAA CGCG TCCATC CGCG CCTTGTGATCACCGG TERM 2114 2694888 - 2694922 + G 86 -4.9 -5.252 | gap 2, overlap 2694886 CGACGTTTCACGATG CGGCTGCGCGCGGCCGG ATT TCG-CCGCTCG-GGCTG TTTTTTCTCGGCGTC TERM 2115 2695256 - 2695305 + G 71 -14.4 -2.82516 | gap 3 GTGCTGGGCGAGCGG GTG-TCGCCGGTGCGCGCGATC-GC GCT GCTGATCGCGCTCGCCGG-GATCGC TGTGCTGATCGGCGG RPD_2416 2694869 - 2695768 + | hypothetical protein TERM 2116 2695780 - 2695806 + T 70 -7.9 -4.09864 | opp_overlap 2695784, overlap 2695784 CTGAATGCCAACAGC AAAACGGCGCC ACGCG GGCGCCGTTCG TTTTCAGAGCTAGCT TERM 2117 2695784 - 2695802 + T 77 -13.1 -3.67175 | opp_overlap 2695784, overlap 2695780 ATGCCAACAGCAAAA CGGCGCC ACGCG GGCGCCG TTCGTTTTCAGAGCT TERM 2118 2695802 - 2695784 - T 100 -13.1 -4.43012 | opp_overlap 2695780 2695784 ATGCCAACAGCAAAA CGGCGCC ACGCG GGCGCCG TTCGTTTTCAGAGCT RPD_2417 2696500 - 2695829 - | hypothetical protein RPD_2418 2696737 - 2697159 + | NADH dehydrogenase TERM 2119 2697190 - 2697173 - T 89 -12.7 -4.16279 | opp_overlap 2697165 2697164, overlap 2697155 2697165 GAGACGACCGGAAAA GCCGGTC AGCT GACCGGC TCGTCAGGGTTGTCG RPD_2419 2698560 - 2697208 - | agarase TERM 2120 2698306 - 2698344 + g 83 -15.8 -3.53444 | overlap 2698308 CCACGACGCCAGGCG CCCGGCGGCCGCGCCGCG CCA TGCGTCGCGGCTGCCGTA TTTGCGCAGGCATGC TERM 2121 2698308 - 2698342 + g 100 -22.8 -3.34517 | overlap 2698306 ACGACGCCAGGCGCC CGGCGGCCGCGCCGCG CCA TGCGTCGCGGCTGCCG TATTTGCGCAGGCAT RPD_2420 2699602 - 2698658 - | Alpha/beta hydrolase fold-3 RPD_2421 2700433 - 2699654 - | short-chain dehydrogenase/reductase SDR TERM 2122 2700299 - 2700352 + g 73 -13.8 -3.09516 | opp_overlap 2700289 AACCACCTGATCGAG CGC-TCGCCGATCGCGGTCGATCGCG ACGA TGCGGGCG-CCGCGTTCGGCGAGGAG TTGGATGGTCGCGGC TERM 2123 2701060 - 2701039 - g 79 -12.9 -3.65046 | GGCCCAGCCCAACAA CGGCGTCGC CGCC GCGCCGCCG GGCGGCAATCCGCTG RPD_2422 2700668 - 2701618 + | hypothetical protein RPD_2423 2702906 - 2701740 - | peptidase S1 and S6, chymotrypsin/Hap RPD_2424 2703387 - 2703067 - | hypothetical protein aat 2704183 - 2703509 - | leucyl/phenylalanyl-tRNA--protein transferase RPD_2426 2705483 - 2704263 - | hypothetical protein RPD_2427 2706384 - 2705713 - | hypothetical protein TERM 2124 2705740 - 2705781 + g 73 -13.6 -3.33696 | gap 1 GGCGAGCCAGATCCA GTGCCGGGACCCGCCG-CG CTTGC CGACGGCGCGCACCGGCAC TTCGTTGACGGCGAA RPD_2428 2707479 - 2706397 - | signal transduction histidine kinase TERM 2125 2706480 - 2706499 + g 72 -13.6 -3.15544 | AATGCGTTGGGTCGC GCTCGACG CTGG CGTCGAGC TTGGTCGCCATCGCA RPD_2429 2707919 - 2707476 - | response regulator receiver TERM 2126 2707615 - 2707655 + g 70 -9.9 -3.6284 | CAACGCTTGATTTCC TGTGCGTC-GTCGGTGGTG GTCAG CACCA-CGACGGGCGTACA TTTGAGATGATCATT RPD_2430 2709448 - 2707916 - | multi-sensor signal transduction histidine kinase TERM 2127 2708920 - 2708938 + g 79 -4.4 -4.72007 | overlap 2708922 TACGATCGGCGGCAG CCGTGCGC ATT GCGAACAG TTTGTTTTCCTCAGC TERM 2128 2709263 - 2709236 - G 76 -8.3 -4.19177 | opp_overlap 2709236 2709235 ACCGGTCAACAGAAA GCCTCGCTCGG CGCTTT CCGAGCGGCGC ATTTGCAGTTGTGAG RPD_2431 2710916 - 2709561 - | acetyl-CoA carboxylase biotin carboxylase subunit RPD_2432 2711537 - 2711025 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein RPD_2433 2712045 - 2711575 - | 3-dehydroquinate dehydratase TERM 2129 2711915 - 2711889 - G 77 -13.6 -3.53811 | opp_overlap 2711876 2711891 TGGACTGCCGGCAAA CCGCGGTGAGGC CGA GGCTCGCCGCGG TCTCGGCGCACAGCC TERM 2130 2712310 - 2712334 + r 79 -11.4 -3.8969 | opp_overlap 2712310 CGCACGAAAAAGAAA GGGCGGCC CGTCGCGAA GGCCGCCC TTCTTGTGTCGCTGC TERM 2131 2712334 - 2712310 - R 100 -12.1 -4.91852 | opp_overlap 2712310 CGCACGAAAAAGAAA GGGCGGCCC GTCGCGA AGGCCGCCC TTCTTGTGTCGCTGC RPD_2434 2713075 - 2712359 - | hypothetical protein TERM 2132 2712816 - 2712840 + g 79 -7.7 -4.48072 | CCGTCCTGCGCGCGC TGGTCCCTGGC CCC GCCCGGAGCCA TTTTGTCGTCGCTCT TERM 2133 2713134 - 2713157 + H 77 -2.3 -5.07652 | CCGCACAGCGCCGTT CCGCCGG TGATGGAGTT CCCGCGG TTTTGTTTTGGCGAC RPD_2435 2713337 - 2713549 + | hypothetical protein RPD_2436 2714448 - 2713681 - | DSBA oxidoreductase TERM 2134 2714605 - 2714633 + r 100 -16 -4.03234 | GTGTCGAAGCTTGTT GTGCCGACGCTC GCATG GAGCGCCGGCAC TTTGTCTGCAGCGCG RPD_2437 2715296 - 2714667 - | peroxidase TERM 2135 2714710 - 2714694 - G 71 -13.7 -2.88544 | GGTCAGGCGGAGATA GGGACGC GGC GCGTCCC ACCCCTGCGGGAACG RPD_2438 2715901 - 2715527 - | hypothetical protein RPD_2439 2717485 - 2716058 - | peptidase M48, Ste24p RPD_2440 2717593 - 2718792 + | aminotransferase, class I and II RPD_2441 2719311 - 2720648 + | sodium:dicarboxylate symporter TERM 2136 2720669 - 2720698 + T 100 -15.7 -5.42259 | opp_overlap 2720672, overlap 2720672 CGACCGACCAAAAAG AAACCGCCCGGCT TGAT GGCCGGGCGGTTC TTTTTTTGGGGGTGA TERM 2137 2720672 - 2720695 + T 100 -17.4 -4.79949 | opp_overlap 2720672, overlap 2720669 CCGACCAAAAAGAAA CCGCCCGGCT TGAT GGCCGGGCGG TTCTTTTTTTGGGGG TERM 2138 2720695 - 2720672 - T 100 -16.7 -4.91852 | opp_overlap 2720672 2720669 CCGACCAAAAAGAAA CCGCCCGGC TTGATG GCCGGGCGG TTCTTTTTTTGGGGG RPD_2442 2723854 - 2720723 - | ribonuclease TERM 2139 2720976 - 2721020 + g 85 -10.5 -4.19953 | opp_overlap 2720975 2720974 TGAGCGGACGAAACC GGCTCGCTCTGCGGAGCCGCA CTC TGCGGAGCCGCAGGCTCGGCC TTTTCCGGTTCGCTC TERM 2140 2721454 - 2721505 + g 100 -23.6 -3.11634 | CCTCGCCGGTGCGCG GCCGGCGGCGGCGGCGGCGCTTGC GCTT GCGGGCGTCGCCTTCGCCTTCGGC TTCGATGCTGTCGCC TERM 2141 2723994 - 2724036 + H 81 -14.1 -3.6682 | gap 1, opp_overlap 2723959, overlap 2723961 CGGTTTCGAACCCGA GGCGGTGCGCGTGGCGAAGC TGTC GCTTCGCGGCG-GCGCGGCC TTTGCGTGGGTCCGG TERM 2142 2724348 - 2724311 - H 72 -4 -4.66609 | GAGGGGACGGAAAAA CGCAAAATCCCGCTGC TCAGGT GTTGAGGGATTTGGCG CTGCGCCGAATGGCT TERM 2143 2724560 - 2724571 + G 71 -3 -4.63218 | CGTTGTCAGGGCGCG CAAA TCAT TTTG TTTTGTTCCGCGCAA TERM 2144 2725519 - 2725494 - g 70 -6.1 -4.18506 | overlap 2725495 CGATGCGGAAAACAA GGCCGACGC GATCGGCG GCGTCAACC TGACCGAGGAGCCGA RPD_2443 2724526 - 2725851 + | N-acetylmuramoyl-L-alanine amidase TERM 2145 2727293 - 2727259 - g 83 -15.7 -3.5936 | GTGAAATGGGCGAAA CCGGCGG-CCGGCCCGC AGC GCG-GCCGGACCCCCGG ATCGGTCTCGCAGGT RPD_2444 2726062 - 2728554 + | penicillin-binding protein 1A RPD_2445 2728822 - 2729790 + | peptide chain release factor 2 RPD_2446 2730368 - 2729787 - | hypothetical protein TERM 2146 2729815 - 2729844 + g 72 -13.6 -3.19425 | overlap 2729839 GTGCTTAGCGTCGCC CTCAGAGGCGCG CTCCAA CGCCCCTCTGAG TTCCTAAGATTCATT TERM 2147 2729928 - 2729946 + g 95 -5.2 -5.43974 | opp_overlap 2729930, overlap 2729930 TAGGTAGCCCCCAAA AATCGGCG TGC CGCTGATC TTTTTGTTTAGTTTT TERM 2148 2729930 - 2729944 + g 77 -7.8 -4.30791 | opp_overlap 2729930, overlap 2729928 GGTAGCCCCCAAAAA TCGGCG TGC CGCTGA TCTTTTTGTTTAGTT TERM 2149 2729944 - 2729930 - G 77 -5.6 -4.58395 | opp_overlap 2729928 2729930 GGTAGCCCCCAAAAA TCGGCG TGC CGCTGA TCTTTTTGTTTAGTT TERM 2150 2730397 - 2730373 - R 74 -5 -4.5442 | TCGGGAATCATAAAA TGGTCTCCCT ATAGA AGTAAGACCA TTGAGCTAATCACAG RPD_2447 2731838 - 2730459 - | peptidase M23B TERM 2151 2731266 - 2731231 - G 78 -14.6 -3.28712 | gap 1 GCGGCTGCGGGAGAA CGCGACTCCAG-CCGCG CCT CGCGGTCCGGCGGCGCG ACGAAGATCACGGTG RPD_2448 2732589 - 2731927 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2152 2732372 - 2732424 + g 81 -14.6 -3.5394 | AAGGCCGGCGCCTTG GCGCCCTCGGCGAGACCGGCGGCT GTCGG GGCCGCGGGCTTCGCCGCAGTCGC TTTGCCGGGGGCTTT TERM 2153 2732513 - 2732539 + g 100 -12.2 -4.59773 | overlap 2732529 GCGGCGGACTTCTTG GCCGGTGCCGGA GAT TTCGCCGCCGGC TTTTTCGCGGTCGCC TERM 2154 2735746 - 2735761 + G 81 -8.2 -4.56597 | overlap 2735747 ACCTCGACCTCAAGC TCGGCG CGGT CGCCGG TTTTTACGGCGAGGC TERM 2155 2736500 - 2736479 - g 83 -13.7 -3.88232 | opp_overlap 2736473 2736471 2736470 CGGCCGACAGAACAA CGGCGTCGA TTTC CCGACGCCG CCGAACTGATTTCGA RPD_2449 2732778 - 2736509 + | hypothetical protein RPD_2450 2737099 - 2736533 - | cytochrome B561 TERM 2156 2737150 - 2737169 + r 73 -12.8 -3.16564 | opp_overlap 2737119 TAGGGTGAGCAGCTC GCCGGGCG ATGG TGCCCGGC TTCGTGGCCTGGGCG RPD_2451 2738585 - 2737332 - | major facilitator transporter TERM 2157 2737614 - 2737603 - G 70 -3.6 -4.5265 | AAGCACAGCACAAAA CCCG TCAG CAGG AAGTAATTGGGGTAC RPD_2452 2739887 - 2738631 - | tyrosyl-tRNA synthetase TERM 2158 2738949 - 2738972 + g 72 -13.8 -3.05463 | CTTGTCGGCGGCGTC GCGGCCGTGC ACCA GCGCGGTCGC TTCGGTGGCCAGGAT TERM 2159 2740472 - 2740490 + G 70 -11.6 -3.37053 | CGCCGACGTCGCCGC CGGCGGGC AGG GCGCGCCG TTCGTTCCGGTCTAT TERM 2160 2740732 - 2740751 + G 84 -9.3 -4.56597 | ATGAGGGCTGGTTGG CGGATGC GCTGCA GCATCCG TTTTTCGCCAAGCCG anmK 2740041 - 2741144 + | anhydro-N-acetylmuramic acid kinase TERM 2161 2741139 - 2741154 + T 78 -3.2 -5.08601 | GGGCTGATCGCAAGA CCCTGA ATTA TTGGGG TTTTTGTTGCGATGA RPD_2454 2741892 - 2741245 - | hypothetical protein RPD_2455 2742131 - 2743303 + | aminotransferase, class V TERM 2162 2743432 - 2743405 - g 88 -9.8 -4.30719 | overlap 2743401 2743406 CTGCCGTACAAGAAA CCGTCGATCGGG TTCG CCAGATCGACGT CGATCAATATCGCTA TERM 2163 2743431 - 2743406 - g 72 -13.3 -3.1811 | overlap 2743401 2743405 TGCCGTACAAGAAAC CGTCGATCGGG TTCG CCAGATCGACG TCGATCAATATCGCT RPD_2456 2743386 - 2744867 + | cysteine desulfurase activator complex subunit SufB TERM 2164 2744953 - 2744967 + F 73 -12.8 -3.14132 | opp_overlap 2744902 2744901 2744937 2744934 CTCGTCCTTCGAGAC GCGCGC AAC GCGCGC TTCCTCAGGACGACG RPD_2457 2745000 - 2745758 + | FeS assembly ATPase SufC RPD_2458 2745779 - 2747092 + | FeS assembly protein SufD RPD_2459 2747089 - 2748336 + | SufS subfamily cysteine desulfurase RPD_2460 2748333 - 2748701 + | hypothetical protein RPD_2461 2748802 - 2749206 + | FeS assembly scaffold SufA RPD_2462 2750303 - 2749236 - | GGDEF domain-containing protein TERM 2165 2749399 - 2749428 + g 70 -8.5 -3.96068 | gap 1 ACGCCGGCCGACAGC GTCACCCGGCCGAG GAT CTCG-CCGGTCGAC TTCTTCTTCAGCTCC RPD_2463 2751911 - 2750409 - | DEAD/DEAH box helicase-like TERM 2166 2750769 - 2750809 + g 88 -14.8 -3.91084 | gap 2 GGGCCGCTCGGTCTC TTCCTCG-GC-GTCGCCGGC CGG GCCGGCGTCCGCGTGAGGAA TTTCCTTGCCGATCA TERM 2167 2751707 - 2751717 + g 72 -8.2 -4.10161 | overlap 2751697 GCGGCATCCGCGCCC GGGC GCG GCCC TTTTCCAGCATCGTC RPD_2464 2753262 - 2752273 - | helix-turn-helix, AraC type TERM 2168 2753304 - 2753323 + H 85 -5.7 -4.96646 | CGCATGCCTACTCGT GGACCGA ATGCGA TCGGTTC TTTTTCGTTCTGTCC TERM 2169 2753925 - 2753885 - g 73 -14.2 -3.1085 | opp_overlap 2753885 2753884 2753887, overlap 2753887 GGAATTCATTGAATA CATC-GCGCAGGCCAAGAAG GGG CTTC-CGGCCTACGCAGATG ATTTCGACCGGATTG RPD_2465 2753592 - 2755277 + | chemotaxis sensory transducer TERM 2170 2755321 - 2755289 - f 95 -16.3 -3.88787 | GTAGAGCGTGACAAA GCGTATTCCGCGAGC GGT GCTCCCGGACTACGC GCAATCCCCGCGATT TERM 2171 2755331 - 2755371 + F 93 -20.6 -3.01924 | CTACGCGCAATCCCC GCGATTGGAGAGTCCGGT CTCAC GCCGGACTCTCCAATCAC TATTCCCGCCCCGTG TERM 2172 2755540 - 2755576 + G 70 -11.6 -3.41527 | opp_overlap 2755539 TTGATGCGATCGAAC TGGCTCCGGGCGCTG-TC GGC GATCGGCGC-CGGCGCCA TTGTGCTGGCGCTTG TERM 2173 2756043 - 2756007 - g 70 -10.8 -3.61398 | gap 2, opp_overlap 2756031, overlap 2756008 CGCCTGCCGCAACAA CCCGTTCGAGCGCCGCGG CAC CCGCG-CGCTCGC-CGGC CGCGGCGGGCTCGCG RPD_2466 2755528 - 2757021 + | peptidase C14, caspase catalytic subunit p20 RPD_2467 2757135 - 2757857 + | aquaporin Z RPD_2468 2759957 - 2758068 - | peptidase C14, caspase catalytic subunit p20 RPD_2469 2760124 - 2760588 + | hypothetical protein RPD_2470 2760826 - 2761593 + | hypothetical protein TERM 2174 2761770 - 2761720 - f 91 -11.6 -4.30987 | gap 4, opp_overlap 2761726, overlap 2761722 ACGCGTCAGAACAAA CA-GCTAGAGC-T--CCGGTTCTGAT TCG ATCAGAACCGGAAAAGCTCTAGCCTG GCCGCTCTCGCGGAG TERM 2175 2761767 - 2761722 - f 88 -14.4 -3.75817 | gap 3, opp_overlap 2761726, overlap 2761720 GCGTCAGAACAAACA GCTAGAGC-T--CCGGTTCTGAT TCG ATCAGAACCGGAAAAGCTCTAGC CTGGCCGCTCTCGCG RPD_2471 2761870 - 2762778 + | dienelactone hydrolase RPD_2472 2763045 - 2762857 - | hypothetical protein RPD_2473 2764187 - 2763150 - | LysR, substrate-binding RPD_2474 2764302 - 2765915 + | gamma-glutamyltransferase RPD_2475 2765956 - 2767173 + | ABC-type branched-chain amino acid transport systems, periplasmic component RPD_2476 2768140 - 2767349 - | molybdate transport repressor RPD_2477 2768961 - 2768338 - | hypothetical protein RPD_2478 2769765 - 2768965 - | ABC transporter related TERM 2176 2769032 - 2769014 - G 75 -16 -2.78384 | opp_overlap 2769017 GGCCGCGTCACCACA CGACGCCC CGA GGGCGTCG ATTCGAGGCAAAGCT TERM 2177 2769219 - 2769195 - G 70 -13.5 -2.94962 | overlap 2769186 2769190 ACACCAGCAAGGATA GTCCCCGCGCC GCC AGCGCGCGGAC CTGATCGAGCAGAGC RPD_2479 2770784 - 2769762 - | transport system permease protein TERM 2178 2770189 - 2770152 - G 70 -10.5 -3.75024 | gap 1 GCGCAGCAGGAATAA CGG-GACCAGCCCGACCG CCA CGGTCGGGATCACCACCG CGAGGTCCTCGGGAC RPD_2480 2771838 - 2770786 - | periplasmic binding protein TERM 2179 2771282 - 2771250 - G 70 -13.4 -2.98823 | gap 1 CGCGGGCGAGATAGA TGCGCGGCCGCGCCG CCGG CGGCACGGTCGCG-A CGACGCGGTCGACCT TERM 2180 2771605 - 2771638 + g 72 -8.2 -4.07568 | gap 2 CAGGAACGGCTTGTC GATG-TC-GCGGGGGG CGCG CCCCCAGCCGATCATC TTTTCCGGCGCGACG RPD_2481 2772389 - 2771841 - | hypothetical protein TERM 2181 2773556 - 2773594 + G 73 -13 -3.31144 | overlap 2773557 GAGCTGCCGTCGAGC TTCACGCCGACCGCGGTC GAG GACGGCGGTCGGCGCAAC TTCTCGGACTCCAAC TERM 2182 2773557 - 2773593 + G 77 -16.5 -2.58544 | overlap 2773556 AGCTGCCGTCGAGCT TCACGCCGACCGCGGTC GAG GACGGCGGTCGGCGCAA CTTCTCGGACTCCAA RPD_2482 2772908 - 2775094 + | TonB-dependent receptor TERM 2183 2775137 - 2775113 - f 83 -14.2 -3.39895 | overlap 2775114 CGGCCGATCAACCAA GGGCCCCCGC TGGCG GCGGGGGCCT CACCGACGGCAGCTG TERM 2184 2775136 - 2775114 - f 86 -17.7 -2.63723 | overlap 2775113 GGCCGATCAACCAAG GGCCCCCGC TGGCG GCGGGGGCC TCACCGACGGCAGCT TERM 2185 2775156 - 2775174 + F 74 -13.8 -2.85999 | CGACGGCAGCTGCAC GCCGCCGC CCG GTGGCGGC TGTCGTCTGGCGTGG TERM 2186 2775250 - 2775263 + G 72 -4.5 -4.56597 | overlap 2775244 GCCGGGAACGCCGCG GTCGG CTGT TCGAC TTTTTCGAGGGGCGG RPD_2483 2775186 - 2775458 + | hypothetical protein RPD_2484 2777626 - 2775572 - | DNA topoisomerase IV subunit B TERM 2187 2777243 - 2777254 + g 79 -2.2 -5.03747 | CGTGCACATGATCAC TTCG AGCG CGGA TTTTTTCGGAAATTT RPD_2485 2778089 - 2778619 + | DedA family integral membrane protein RPD_2486 2778753 - 2779745 + | twin-arginine translocation pathway signal TERM 2188 2780177 - 2780196 + G 91 -12.8 -4.1899 | ATGACGGCCGCAAGC CGGCGGCG TCGC CGCTGCCG TTTTCGATCGACTAC RPD_2487 2780077 - 2780745 + | negative transcriptional regulator TERM 2189 2781024 - 2781001 - g 73 -5.9 -4.41616 | overlap 2781003 ACGCCGCGAAAGAAA CCGTGGCGC TGATCG ACGCCATGG GCGGCGAGGCGCCCA RPD_2488 2780757 - 2781752 + | N-acetyl-gamma-glutamyl-phosphate reductase RPD_2489 2781861 - 2782463 + | methyltransferase type 11 RPD_2490 2782724 - 2784541 + | radical SAM family protein TERM 2190 2784530 - 2784570 + F 70 -12.6 -2.84325 | gap 1, opp_overlap 2784514, overlap 2784527 2784565 CTCACCACGGTGAAG TCGGTGGCGTAGCCCGCCG ATGG CGGTGGGCTGGGC-ATCGA TGATGTTTCCGAAAC RPD_2491 2784770 - 2785132 + | hypothetical protein RPD_2492 2787011 - 2785143 - | Poly(R)-hydroxyalkanoic acid synthase, class I TERM 2191 2786966 - 2786982 + g 73 -3.7 -4.58466 | overlap 2786980 GACGTTTTACCCTGT TCGAATA TCT TATACGA TTTTGTCGTTGTCGG RPD_2493 2787252 - 2787602 + | hypothetical protein RPD_2494 2787788 - 2789008 + | aminotransferase RPD_2495 2789084 - 2790403 + | homoserine dehydrogenase TERM 2192 2790420 - 2790448 + F 71 -13.8 -2.60496 | opp_overlap 2790420 2790419, overlap 2790419 2790417 ACGCGTCAGCGAAAG TGCGCCCGCGCC GATGG GGTGCGGGCGGA GTGTTTGAGGAGAGG TERM 2193 2791084 - 2791033 - g 72 -14.2 -3.0464 | opp_overlap 2791063 AACTCATTTCCAAGA TCCGCGCCACCGGCGCCGGCGTTC AGCT GATCACCGACGGCGACGTCGCGGG CGTGATCCATTGCGC glpX 2790468 - 2791472 + | fructose 1,6-bisphosphatase II TERM 2194 2791475 - 2791502 + F 100 -13.5 -4.3487 | gap 1 CCACCTCGACTGACC CTCGGGCTCCGA CCTGA TCGG-GCCCGAG TTTTCGATTGTCTGT TERM 2195 2791674 - 2791709 + G 70 -11.1 -3.57144 | gap 1, opp_overlap 2791668 TTCTACAAGGCGACC CTGACCCCGGG-CACG AGCGA CGTGACCTGGGGACGG TTTCACGATCCCGCC RPD_2497 2791584 - 2792027 + | GCN5-related N-acetyltransferase RPD_2498 2792159 - 2792887 + | haloacid dehalogenase, type II TERM 2196 2794281 - 2794257 - g 70 -9.9 -3.65812 | GGGGCTGGAAGACAA GGGCGCGGTGA TCG TCACCGCCTCC GAGGGCTGGCATCCC TERM 2197 2794491 - 2794465 - g 70 -10 -3.72576 | GGCCTGCTGATGAAA GGCGGCGGCCAC GCG ATGGCCGCGGGC GTGACGCTGCGCAAG RPD_2499 2793058 - 2794959 + | single-stranded-DNA-specific exonuclease RecJ TERM 2198 2795019 - 2794978 - T 74 -13.7 -2.90212 | gap 1, opp_overlap 2795009 2795016 TGATCAGGTGACAGA GTCATTCCGGG-ATGCGCGC TCT GCGCGCAGACCCGGAATCTC GCGGACGTGGAATGC RPD_2500 2795396 - 2795088 - | hypothetical protein RPD_2501 2796588 - 2795473 - | hypothetical protein TERM 2199 2796465 - 2796440 - G 73 -11.1 -3.65902 | overlap 2796442 TCGAGGTGATCGAAA TAGGCGCCGAT CAGC ATCGGCGCCCC CGCGGCCAGCGCGAC TERM 2200 2796463 - 2796442 - G 82 -15.9 -3.41073 | overlap 2796440 GAGGTGATCGAAATA GGCGCCGAT CAGC ATCGGCGCC CCCGCGGCCAGCGCG RPD_2502 2797825 - 2796599 - | lytic murein transglycosylase TERM 2201 2797049 - 2797035 - G 72 -5.6 -4.40804 | overlap 2797037 2797038 GACCAGGCCAGAAAA GAGCGG CTG CCGCTG ATCGCGCCGCCCGGG RPD_2503 2799552 - 2797924 - | peptidase M23B TERM 2202 2799659 - 2799679 + r 91 -15.4 -3.92522 | opp_overlap 2799659 TCCACCCACGAAAAA GCCCGCCG GGACG CGGCGGGC TTTGTCGAATTCAGA TERM 2203 2799679 - 2799659 - R 100 -15.4 -4.7497 | opp_overlap 2799659 TCCACCCACGAAAAA GCCCGCCG GGACG CGGCGGGC TTTGTCGAATTCAGA RPD_2504 2800276 - 2799710 - | elongation factor P TERM 2204 2800487 - 2800521 + G 72 -14.9 -2.71011 | gap 1, overlap 2800492 GGAAGCCGTTTCTGC G-CGCGCGCAGCGCGG TGAC CCGGGCCGCGCGCGAC TGGTTCGCCGCCGCT RPD_2505 2800417 - 2801472 + | lysine--tRNA ligase RPD_2506 2801469 - 2802560 + | hypothetical protein RPD_2507 2802780 - 2803097 + | hypothetical protein TERM 2205 2803112 - 2803076 - T 74 -13 -3.37245 | gap 1, opp_overlap 2803082 CGACCGCAAGATCAA GAGCATCTGCCGCGGCT GCTG AGCCGCGGCCGTT-CTC GACGCTTCGGTCGTC TERM 2206 2803082 - 2803107 + T 88 -16.1 -3.31322 | opp_overlap 2803076 CAAGATCAAGAGCAT CTGCCGCGGCT GCTG AGCCGCGGCCG TTCTCGACGCTTCGG RPD_2508 2803701 - 2803126 - | hypothetical protein TERM 2207 2804045 - 2804059 + H 72 -4.2 -4.65895 | TTGCGCTCGGCTTTG CGATCA CGG TGTTCG TTTTTGCCTAAGCCG TERM 2208 2804097 - 2804134 + H 72 -11.9 -3.25823 | gap 1, opp_overlap 2804080 CTTCGGCGTGAGCCA CGCGTTCAG-GACGACGC GCA GCGCCGCCGCTGGGCGCG TTGCTGTCGGACGCC TERM 2209 2804232 - 2804254 + H 83 -6.9 -4.89063 | opp_overlap 2804233, overlap 2804233 2804246 CATGATGAGCGACAT ACGATCGGC TTGCC GCCGGTCGC TTTCTTTTTAAGTGG RPD_2509 2804281 - 2804517 + | hypothetical protein RPD_2510 2804747 - 2805121 + | response regulator receiver RPD_2511 2805336 - 2806154 + | methyltransferase FkbM TERM 2210 2806775 - 2806800 + T 75 -11.7 -3.65991 | opp_overlap 2806766 2806763 ATATCACCACTGCTA GCCGCCCCAGC AATG GCCGGAGCGGC TTGTCTTGGAGCAGT RPD_2512 2809909 - 2806850 - | Outer membrane autotransporter barrel TERM 2211 2809285 - 2809304 + g 72 -15 -2.71364 | CTACGCCGCCGCTAC CGCCGCTG CCAG CAGCGGCG TCATTGAGAGCGTCG TERM 2212 2810589 - 2810599 + G 75 -6.8 -4.36914 | opp_overlap 2810574, overlap 2810587 GCTCTGCCTTCTGGC TGCG CGG CGCA TTTTATAACGGCAGC TERM 2213 2812439 - 2812398 - g 72 -7.3 -4.23758 | gap 1, opp_overlap 2812400 2812404, overlap 2812399 ATGCCATACGCAAAA CCCTCAGCGTTCTCGTCGTC GAC GACGACGAGAACAATC-GGT TCGTCCTCTCCGGCT RPD_2513 2810300 - 2813137 + | ATP-binding region, ATPase-like RPD_2514 2813808 - 2813110 - | response regulator receiver RPD_2515 2815050 - 2814355 - | cyclic nucleotide-binding TERM 2214 2814683 - 2814670 - G 73 -9.5 -3.94634 | opp_overlap 2814678 TATGAGGCCAAATAA CCGCC AAGC GGCGG GATCGCACCTGACGA TERM 2215 2815068 - 2815091 + H 81 -2.3 -5.11063 | overlap 2815069 2815070 TTCACCTCAAAAGGT CGCCGGTGA TCAATC TCACCGGAA TTTTTGTTCCATCCT RPD_2516 2815177 - 2817564 + | sulfatase RPD_2517 2817595 - 2817957 + | hypothetical protein RPD_2518 2818130 - 2819269 + | secretion protein HlyD RPD_2519 2819409 - 2819696 + | AraC family regulator TERM 2216 2819694 - 2819707 + T 81 -6.7 -4.67697 | TTGGCCGCTCGGAAT TGACG GAAG CGTCA TTTATTCTTTTGCGG RPD_2520 2821154 - 2819709 - | lytic transglycosylase, catalytic TERM 2217 2820342 - 2820354 + g 72 -4.8 -4.56597 | opp_overlap 2820349, overlap 2820335 CGCCAGTTCCTTTTG CAGC AGAGG GCTG TTTTTGCGGACGGCC TERM 2218 2821101 - 2821088 - G 70 -3.7 -4.44046 | GCGACTGCAAACAAA CGGCG AGTG CGGCG AGACCCGTTAACGTC RPD_2521 2821375 - 2821719 + | hypothetical protein RPD_2522 2821921 - 2824290 + | sulfatase RPD_2523 2824386 - 2824841 + | hypothetical protein TERM 2219 2824917 - 2824891 - f 93 -20.2 -3.09516 | opp_overlap 2824887 TTCCTCACGACTGAA GCGACCGCCAGC CTG GCTGACGGTCGC AAACCATTCCGTGGT TERM 2220 2825161 - 2825178 + G 79 -2.6 -5.06451 | overlap 2825163 CATGGTGAGTCGCTC GATGCG ACCGAG CGCAGC TTTTTTCCGCTGGTC RPD_2524 2824957 - 2825835 + | hypothetical protein RPD_2525 2825855 - 2826472 + | invasion associated locus B TERM 2221 2828245 - 2828290 + G 76 -14.7 -3.21099 | gap 1, overlap 2828246 GTTCGTCGCTGCGCA GCGTCTCAACGCGGATCG-GCC CGA GGCGCGATCGGCGCTGGGACGG TTCCTGCTGCAGCGC TERM 2222 2828246 - 2828289 + G 85 -18.2 -2.52516 | gap 1, overlap 2828245 TTCGTCGCTGCGCAG CGTCTCAACGCGGATCG-GCC CGA GGCGCGATCGGCGCTGGGACG GTTCCTGCTGCAGCG RPD_2526 2826482 - 2828836 + | tetratricopeptide TPR_2 RPD_2527 2829571 - 2829828 + | hypothetical protein TERM 2223 2829956 - 2829925 - T 100 -13.8 -4.5528 | gap 1, opp_overlap 2829925 2829930 CAAAAGCAATCAAAA GCAAACAGGCCCCGC AAG GCGAGACCTGTT-GC TGTTCGAATCAAGTC RPD_2528 2830650 - 2830201 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2224 2830880 - 2830843 - H 100 -20.7 -3.75933 | gap 1, opp_overlap 2830848, overlap 2830831 2830848 2830850 ACACAGGTGATGAAA CCACAGAGGCCCCGGAGC GAT GCTCCGGGGCCTCT-TGC TTGTCGATGATCGCA TERM 2225 2830848 - 2830876 + H 100 -26.1 -3.46212 | opp_overlap 2830843 2830831 2830848 2830850 GGTGATGAAACCACA GAGGCCCCGGAGC GAT GCTCCGGGGCCTC TTGCTTGTCGATGAT TERM 2226 2830876 - 2830848 - H 100 -26.1 -3.03701 | opp_overlap 2830848, overlap 2830843 2830831 2830850 GGTGATGAAACCACA GAGGCCCCGGAGC GAT GCTCCGGGGCCTC TTGCTTGTCGATGAT TERM 2227 2830874 - 2830850 - H 100 -22.9 -3.07227 | opp_overlap 2830848, overlap 2830848 2830843 2830831 TGATGAAACCACAGA GGCCCCGGAGC GAT GCTCCGGGGCC TCTTGCTTGTCGATG TERM 2228 2830977 - 2830950 - H 100 -11.3 -4.72272 | opp_overlap 2830950 CCCGCTGACGAAAAA GAGCCCCGC CTTGGAGGTC GCGGGGCTC TTTCCGGGGGGAGGT TERM 2229 2830950 - 2830977 + H 71 -11.3 -3.53091 | opp_overlap 2830950 CCCGCTGACGAAAAA GAGCCCCGC CTTGGAGGTC GCGGGGCTC TTTCCGGGGGGAGGT TERM 2230 2831294 - 2831307 + G 74 -8.1 -4.18018 | GGGATCTCCACCGAG TCCGG CATT CCGGA TTTTCGGTCCCCCAA TERM 2231 2831392 - 2831363 - g 72 -12.9 -3.14211 | gap 1 ATTCCGTTCGACGAA TTCGTCGCGCGACA GGA TG-CGCGCGACGAG GCCTGGCGGCGGCGC RPD_2529 2831192 - 2831953 + | silent information regulator protein Sir2 RPD_2530 2832178 - 2832837 + | cold-shock DNA-binding domain protein TERM 2232 2833375 - 2833361 - g 70 -11.4 -3.35992 | opp_overlap 2833357 2833353 ATGTATCGCAAGCAA CTGCCC GAA GGGCAG GGGATGCTGTTCGAC TERM 2233 2833597 - 2833579 - g 73 -3.8 -4.59773 | gap 1 CGGCACCGCGAAAAA GCTCGGC ATCGCG GCCG-GC GACCGGGTCGGGCAC RPD_2531 2833154 - 2833633 + | hypothetical protein RPD_2532 2835108 - 2833825 - | putative OpgC protein RPD_2533 2835374 - 2835679 + | ETC complex I subunit region RPD_2534 2835924 - 2837528 + | propionyl-CoA carboxylase RPD_2535 2837528 - 2839543 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 2234 2839637 - 2839610 - g 70 -10.6 -3.56325 | gap 1, opp_overlap 2839607 GCTGCAGAACGAGAA GATGCCGGTCGGC GTT GCGGACCGG-ATC ACCTTCGTCGCCGCG RPD_2536 2839551 - 2840471 + | pyruvate carboxyltransferase RPD_2537 2840823 - 2840566 - | hypothetical protein RPD_2538 2840899 - 2841135 + | hypothetical protein RPD_2539 2841549 - 2841199 - | hypothetical protein RPD_2540 2841746 - 2842210 + | peptidylprolyl isomerase TERM 2235 2842224 - 2842258 + T 100 -19.2 -4.14392 | opp_overlap 2842225, overlap 2842225 GACCCCTGCGATAGC ATCGGCAGCCGCTCGC CAT GCGGGCGGCTGCCGCG TTTTCGGCATTACGG TERM 2236 2842257 - 2842225 - T 91 -20.5 -2.62263 | opp_overlap 2842225 2842224 ACCCCTGCGATAGCA TCGGCAGCCGCTCGC CAT GCGGGCGGCTGCCGC GTTTTCGGCATTACG TERM 2237 2842225 - 2842257 + T 100 -22.7 -3.08314 | opp_overlap 2842225, overlap 2842224 ACCCCTGCGATAGCA TCGGCAGCCGCTCGC CAT GCGGGCGGCTGCCGC GTTTTCGGCATTACG RPD_2541 2842600 - 2842268 - | hypothetical protein RPD_2542 2842827 - 2843630 + | hypothetical protein RPD_2543 2843627 - 2844106 + | hypothetical protein TERM 2238 2845054 - 2845080 + G 78 -10 -4.05446 | GAGTGCGGCTACGCC CCCCACGTCGCC AAG GCCGATGCGGGG TTTGTCGTTCCGAGC RPD_2544 2844148 - 2845263 + | glycosyl transferase, group 1 RPD_2545 2845322 - 2846050 + | methyltransferase FkbM TERM 2239 2846332 - 2846277 - g 88 -10.3 -4.4009 | gap 2, overlap 2846278 CGGTATCGGAGAAAA CCCGCGCTGGTCGGCGATCCCGCCGCG GTGG CGCGG-GACATCGCCGGCC-GCAAGGT GCTCGTCACCGTCGC TERM 2240 2846331 - 2846278 - g 75 -13.8 -3.23733 | gap 2, overlap 2846277 GGTATCGGAGAAAAC CCGCGCTGGTCGGCGATCCCGCCGCG GTGG CGCGG-GACATCGCCGGCC-GCAAGG TGCTCGTCACCGTCG TERM 2241 2846697 - 2846728 + G 77 -5.8 -4.68593 | GTGCGCGCCGCCGAG CCGGCCAATGGATG CTGG TATCTATGGCCCGG TTTTTCGATGCTGCG RPD_2546 2846103 - 2847056 + | hypothetical protein TERM 2242 2847205 - 2847173 - T 86 -16.4 -3.22894 | gap 1, opp_overlap 2847167, overlap 2847163 2847165 CAGAAGATCGACCAA GCCGGACGATCGCGG CGAG CCGCGATCGT-CGAC GTCGGACTTAGTAGG RPD_2547 2847461 - 2847213 - | hypothetical protein TERM 2243 2847543 - 2847573 + r 71 -12.6 -3.01497 | GTATTCAGCGACAGG CGACGTGCCGCA CGGAGTA TGCGCCACGTCG TATCATTTGAGATGC RPD_2548 2848086 - 2847607 - | hypothetical protein RPD_2549 2848236 - 2848979 + | hypothetical protein RPD_2550 2849174 - 2849623 + | hypothetical protein TERM 2244 2849710 - 2849727 + F 100 -14.1 -4.28111 | ATCTTTATGCCGGCT CGGGCGG TCGG CCGCCCG TTTCTTGCTGCTCTA TERM 2245 2852282 - 2852331 + G 76 -15.5 -2.87132 | gap 1, overlap 2852286 2852287 2852321 CGCCTTCGACCTGTC CGACCGCGGCGTCACCGGCCGCGC AGT GC-CGGCCGGGGCCGACGCCTTCG TCTATGCCGAGCGCG TERM 2246 2852286 - 2852327 + G 73 -13.5 -3.32022 | gap 1, overlap 2852282 2852287 2852321 TTCGACCTGTCCGAC CGCGGCGTCACCGGCCGCGC AGT GC-CGGCCGGGGCCGACGCC TTCGTCTATGCCGAG TERM 2247 2852287 - 2852326 + G 80 -17 -2.58999 | gap 1, overlap 2852286 2852282 2852321 TCGACCTGTCCGACC GCGGCGTCACCGGCCGCGC AGT GC-CGGCCGGGGCCGACGC CTTCGTCTATGCCGA TERM 2248 2852758 - 2852782 + G 75 -9.1 -4.09685 | overlap 2852759 AAGGCGACCTGCTGG TCGCGCCGGCC GCG GGCCGTCCCGG TTTTCCCGGCTACCA TERM 2249 2853099 - 2853053 - g 74 -10 -3.78934 | opp_overlap 2853063, overlap 2853050 2853054 GTTCGCCGACAAGAA TGTCGCCGACGGCGACGCCG CCAAGTT CGAGGTCGCCTTCGTCGACC CGGACGGCGCCGCGT TERM 2250 2855641 - 2855619 - g 77 -11.3 -3.81951 | overlap 2855630 2855633 GCCGACATCACTAAA GCGAAGCAG AACGA CCGCTTCGC GGTGGTGCTGACGGT TERM 2251 2855792 - 2855780 - g 72 -6.9 -4.1899 | GGACTGGATCGAAAA CGGCC AGG AGCCG GTCAACACCGAGTTC RPD_2551 2850786 - 2855999 + | alpha-2-macroglobulin-like TERM 2252 2856041 - 2856096 + G 100 -21.3 -3.29263 | gap 3 ACTGAAGCCGAGATG TC-GTGTCCCGGG-C-GCGGTGCAGCAC GCA GTGCTGCTCCGCAGACCCGGGACCCCGA TTCTGCGGCCGATGT TERM 2253 2856359 - 2856402 + G 88 -10.3 -4.37092 | GCGATGACCGACGGC CGCTGG-CGGCTGCCGGTC GATGCGAA GACCGGC-GTCGACCCGCG TTTTCTCCAGCAACT TERM 2254 2857134 - 2857146 + G 73 -9.1 -3.90744 | opp_overlap 2857109 2857108 ACGTGCTCGCCCATG TCGGC TCG GCCGA TTATTTCGACGACCG RPD_2552 2855996 - 2858248 + | penicillin-binding protein 1C RPD_2553 2858300 - 2860042 + | glycosyl transferase family protein TERM 2255 2860417 - 2860433 + G 77 -2.9 -4.96501 | overlap 2860418 CCGCGATGATCGGGA TTGGAAC CCG GGTCCAG TTTGTTTTTCTCGCC RPD_2554 2860044 - 2860886 + | phosphoesterase, PA-phosphatase related RPD_2555 2860950 - 2861708 + | glycosyl transferase family protein RPD_2556 2861702 - 2862040 + | lipid A biosynthesis-like TERM 2256 2862059 - 2862100 + T 79 -9 -4.22377 | gap 3, opp_overlap 2862087, overlap 2862058 2862060 CTGTCGAAGTGAACC TGGAGCTTTTCCGGTTCTGAT GGA ATCAGAACCGGG---GCTCCA TCTTTTTGTTCTGAC TERM 2257 2862060 - 2862102 + T 84 -4 -5.18726 | opp_overlap 2862087, overlap 2862058 2862059 TGTCGAAGTGAACCT GGAGCTTTTCCGGTTCTGAT GGA ATCAGAACCGGGGCTCCATC TTTTTGTTCTGACGC RPD_2557 2863370 - 2862171 - | cystathionine beta-lyase TERM 2258 2862445 - 2862433 - G 73 -6.2 -4.33819 | overlap 2862435 ACGATCGAGAACAAA CCGG ACGCG CCGG TAAAGTCGCGCTTCC RPD_2558 2863703 - 2864719 + | lysine-arginine-ornithine-binding periplasmic protein TERM 2259 2865426 - 2865477 + G 72 -11.5 -3.60296 | GTGGAGTCTCGGCCT GCTGATCGGATTGCCGCTGATCG CCGCCT TGATCTTCGGCAAGCCGTTCGGC TTTGAAATACCCGTG RPD_2559 2864737 - 2865942 + | amino acid ABC transporter permease TERM 2260 2866640 - 2866668 + G 82 -6 -4.71426 | gap 2, overlap 2866646 2866646 CTGGATCGATCTCGG CCTGACGGCGGTGA TCG TCACCGC-G-CTGG TTTTGTTGATCGGCG RPD_2560 2865939 - 2867447 + | amino acid ABC transporter permease RPD_2561 2867463 - 2868203 + | ABC transporter related RPD_2562 2868512 - 2868234 - | hypothetical protein RPD_2563 2868621 - 2869121 + | hypothetical protein TERM 2261 2869260 - 2869205 - T 100 -19.9 -4.30719 | gap 3, overlap 2869206 2869207 CTTCTTCAGAAGAAA CCGGGGTCCCGCATCTGCAGCGCAGCGC TGC GCGCTGCACTGC-G-TGCGGGACAC-GA AATGGACGATCGCCC TERM 2262 2869259 - 2869206 - T 95 -21.2 -3.1811 | gap 3, overlap 2869205 2869207 TTCTTCAGAAGAAAC CGGGGTCCCGCATCTGCAGCGCAGCGC TGC GCGCTGCACTGC-G-TGCGGGACAC-G AAATGGACGATCGCC TERM 2263 2869259 - 2869207 - T 100 -21.4 -2.50545 | gap 2, overlap 2869206 2869205 TCTTCAGAAGAAACC GGGGTCCCGCATCTGCAGCGCAGCGC TGC GCGCTGCACTGC-G-TGCGGGACACG AAATGGACGATCGCC RPD_2564 2870603 - 2869566 - | cysteine synthase A RPD_2565 2871961 - 2870732 - | cyclopropane-fatty-acyl-phospholipid synthase RPD_2566 2872861 - 2872010 - | hypothetical protein RPD_2567 2874177 - 2872864 - | amine oxidase TERM 2264 2874384 - 2874372 - H 70 -7.7 -3.96842 | ACCCCAATAGAACAA GGCAA ACC TTGCC GTGCGGTCGTCTCGA TERM 2265 2874998 - 2875008 + G 72 -8.2 -4.13014 | GCAACACCACGATCG CCGG CCG CCGG TTTTCAACCTATGCG TERM 2266 2875124 - 2875068 - g 83 -15.3 -3.61398 | gap 4, opp_overlap 2875076, overlap 2875097 CTTCTGGGGCAAGAA TCGCGA-CG--CCGCGCTGGCGGCCGAGG AAA CCGCGACCGCCAAC-CGGTTCGATCGCGA TGTCGTCGCGCTGAC TERM 2267 2875076 - 2875113 + G 70 -13.3 -3.06501 | gap 1, opp_overlap 2875068 2875097 GCAAGAATCGCGACG CCGCGCTGGCGGCCGAGG AAA CCGCGACCGCCAAC-CGG TTCGATCGCGATGTC RPD_2568 2874610 - 2876058 + | RND efflux system, outer membrane lipoprotein, NodT TERM 2268 2876499 - 2876471 - g 83 -4.5 -5.00616 | gap 1 GCGGTCGCGAAAAAA GCGCAGGACGAG GCGCAG CTCG-CCAACGC CAAGATCGATCTTGC RPD_2569 2876048 - 2877436 + | secretion protein HlyD RPD_2570 2877491 - 2880616 + | acriflavin resistance protein TERM 2269 2881464 - 2881450 - g 72 -5.6 -4.30719 | GCCTGGTACAACAAA CAGCCC GCG GTGCTG ATCCAGATTACCAAA RPD_2571 2880616 - 2883729 + | acriflavin resistance protein TERM 2270 2884456 - 2884441 - g 71 -3.2 -4.66833 | gap 1, overlap 2884442 2884443 GCCGAAGCCGAAAAA GCG-CGA CTA CCGACGC AAGAAGCGCGGCTGA RPD_2572 2883740 - 2884471 + | hypothetical protein TERM 2271 2884650 - 2884696 + T 74 -2.6 -4.91109 | gap 4, opp_overlap 2884678, overlap 2884654 2884657 TGGTGAAATCGGTCA GTCCAGAGCTCTTCCGGTTCTGAT GGA ATCAGAACCGG---AGCTCTA-AC TTTTTGTGCTGACGC RPD_2573 2884975 - 2884802 - | hypothetical protein TERM 2272 2885196 - 2885167 - R 91 -15.1 -3.90112 | opp_overlap 2885162 2885171 2885172, overlap 2885172 TGCGCGCCAAGCAAA GAAAACCGTCCCC CGGA AGGGACGGCTTTC GCGCTTTGGACGAGG TERM 2273 2885191 - 2885172 - R 100 -11.4 -4.99947 | opp_overlap 2885172 2885171 2885162, overlap 2885167 GCCAAGCAAAGAAAA CCGTCCCC CGGA AGGGACGG CTTTCGCGCTTTGGA RPD_2574 2885628 - 2885218 - | hypothetical protein TERM 2274 2885331 - 2885345 + g 72 -11.4 -3.53012 | CGTTCCAGCCGTAGT CGGGCT GGT AGCCCG TTTGGAAAGGCGCGG TERM 2275 2885403 - 2885354 - G 100 -22.1 -3.53224 | gap 1 TAGCCCGTTTGGAAA GGCGCGGTCGCGATCGCG-CCGGC TGC GCCGATCGCGCCCCCGACCACGCC GACGGCGACGTCGCC TERM 2276 2885826 - 2885807 - H 100 -15 -6.06723 | TCGTGGAAAAAAAAA CGGCTGCC TGGA GGCAGCCG GGGGATGAAAGTTGT TERM 2277 2886280 - 2886228 - g 77 -13.4 -3.54424 | gap 2 CCGCACGTCCTCAAA GCGATCGTGCAATCCGAGCCTGCGCC AAG GGCGCTGAC-CGCAACGC-CGATCGC ACGGCGTCACGCAAA TERM 2278 2886355 - 2886317 - g 70 -2.3 -4.57569 | gap 1, opp_overlap 2886303 2886354, overlap 2886318 2886354 CCATTTTCTGAAAAA TGTTGGCTCCCCGGGCCG GATT CGAACCAGCGA-CCAACC GGTTAACAGCCGGTT RPD_2575 2886044 - 2886361 + | hypothetical protein RPD_2576 2886633 - 2887298 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 2279 2887829 - 2887798 - g 80 -17.4 -2.78216 | gap 1, opp_overlap 2887795, overlap 2887795 GAGTGGCAGCAACTA TCCGCG-CACCGTCG GGG CGACGGTGTCGCAGA CGCTGTTCAACGGCA RPD_2577 2887328 - 2888896 + | Type I secretion outer membrane protein, TolC TERM 2280 2888904 - 2888941 + F 80 -16.3 -2.61274 | gap 1, overlap 2888913 GTCGCTGATCTCTTG CGCCTG-AAGGCGCGCCG ATT TGGCGCGCTTTACCGGCG ATTACTTGCAATCAA TERM 2281 2888913 - 2888931 + F 81 -13.8 -3.54459 | overlap 2888904 CTCTTGCGCCTGAAG GCGCGCCG ATT TGGCGCGC TTTACCGGCGATTAC TERM 2282 2889480 - 2889428 - g 73 -13.2 -3.28791 | gap 1, overlap 2889460 AGTCCGGCTCCACAA GCTGCTG-CGCCGAAGCCAGCCGCG CCAC CGAAGCCGGCGCCGGCGCCCGCCGC GGCCGAGGCGAGCAA RPD_2578 2889215 - 2890018 + | hypothetical protein TERM 2283 2890014 - 2890058 + F 82 -11 -3.9644 | gap 2, opp_overlap 2890024 2890043 GGGTGTCGCGCGGAC GCTAGAGCAATTTGGTTCTGAT CGA ATCAGAACCAAA--GCTCCGGC TTGTTGTCTTGACGC TERM 2284 2890050 - 2890024 - f 84 -15.4 -3.27022 | opp_overlap 2890014, overlap 2890043 CGGACGCTAGAGCAA TTTGGTTCTGAT CGA ATCAGAACCAAA GCTCCGGCTTGTTGT TERM 2285 2890255 - 2890280 + G 100 -9.7 -5.28481 | gap 1, opp_overlap 2890252, overlap 2890257 CCGCGTAACGGATGC GTGCG-TTCGCC TTT GGCGAAGCGCCC TTTTTTGATTGCATG TERM 2286 2893056 - 2893010 - g 71 -12.3 -3.27994 | gap 1, overlap 2893041 GGAAGCCGACATCAA GCGCGTCGACGCCAAGC-TCTC GAAC GAGAAGTTCGTCGCCAACGCGC CGGAGGAGATCGTCG TERM 2287 2893107 - 2893088 - g 89 -10 -4.56314 | gap 1 GGAAGAGAAGGAAAA GCGCGA-GG CCG CCGTCGCGC GCAAGGTCAAGATCC valS 2890251 - 2893157 + | valyl-tRNA synthetase RPD_2580 2893413 - 2893970 + | hypothetical protein RPD_2582 2894824 - 2895591 + | hypothetical protein RPD_2583 2896255 - 2895647 - | 3-methyladenine DNA glycosylase TERM 2288 2896593 - 2896565 - g 73 -6.6 -4.41494 | GATCGTCAAGGAAAA CGGCCTCGTTAC GGTGT GCGAGGAGGCCG GCTGCCCGAATATCG RPD_2584 2896401 - 2897360 + | lipoyl synthase TERM 2289 2897682 - 2897652 - g 72 -8.2 -4.15106 | opp_overlap 2897675, overlap 2897653 2897675 CAGCAATCTCGAAAA TCGCTGGACCTTCG TGG CGAAGACCGAGCGC GCCTGCGACGTCGGC TERM 2290 2897683 - 2897697 + G 75 -3.4 -4.7373 | opp_overlap 2897675, overlap 2897675 GCGAAGACCGAGCGC GCCTGC GAC GTCGGC TTTTTCATCGCCTAC RPD_2585 2897371 - 2897844 + | cyclase/dehydrase RPD_2586 2898578 - 2897952 - | CinA-like TERM 2291 2898039 - 2898063 + g 77 -5.5 -4.68908 | GCGGGCGACGCGCTT GTGCAAGTCGG CGG CCGGCGCGCGC TTTGTTTTCGGTGCC RPD_2587 2899776 - 2898580 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPD_2588 2899977 - 2901038 + | dihydrouridine synthase TIM-barrel protein NifR3 TERM 2292 2901539 - 2901493 - g 84 -7.2 -4.82667 | gap 1 GCACGAGATCAAAAA CCCGCTGTCCG-GCATCCGCG GCGCGG CGCAATTGCTCGAGCAGCAGG CGTCGTCGGAAGACC RPD_2589 2901035 - 2902207 + | signal transduction histidine kinase, nitrogen specific, NtrB RPD_2590 2902217 - 2903659 + | nitrogen metabolism transcriptional regulator NtrC TERM 2293 2903660 - 2903670 + F 71 -4.6 -4.48299 | CGGACCGGCGGTTGA CCGT TCG GCGG TTTCTTTGCCTGTGG TERM 2294 2904150 - 2904208 + G 78 -15.9 -3.21276 | gap 1, overlap 2904195 GGTGATCGCGGTGCT GCCGG-CGGTGCTGGTGTCGATCGTGGC CAAC GTCACGCTCGACCGCGGCCTCGACCGGC TGTTCTCCGGGCCGA TERM 2295 2905855 - 2905844 - g 75 -7.2 -4.41348 | GCCTGCCCAAACAAA GCCG CTCG CGGC TGCTCGAACCCTACG RPD_2591 2903815 - 2906103 + | multi-sensor signal transduction histidine kinase TERM 2296 2906681 - 2906700 + G 71 -12.1 -3.23216 | opp_overlap 2906654 2906677 2906676 CGCTGCACAACGCCT CGGGCCG CACCGA CGGCCCG TTCGTGGTGATCAAC TERM 2297 2907002 - 2906981 - g 73 -14.5 -2.91728 | opp_overlap 2906979 2906978 2907000 ATCTCGAAGAGGAGA TCGCGGAAG GACG CTTCCGCGA GGATTTGTATCATCG RPD_2592 2906122 - 2907489 + | two component, sigma54 specific, transcriptional regulator, Fis family RPD_2593 2907526 - 2908383 + | D-amino acid aminotransferase TERM 2298 2908580 - 2908564 - g 83 -4.4 -5.06414 | gap 1, overlap 2908566 TTGCGGGAATAAAAA TG-GCGG CAGA CCGCGCA CAAAACCTACAAGAC hfq 2908563 - 2908811 + | RNA-binding protein Hfq RPD_2595 2908892 - 2910196 + | GTP-binding protein, HSR1-related TERM 2299 2912218 - 2912188 - g 74 -5.4 -4.48987 | gap 2, overlap 2912189 GGTCTACAAGGAAAA GGTCTGGCGGCTGC CGATC GC-GCCGCC-GAAC GGCCGCGGCAAGGCG RPD_2596 2910377 - 2913130 + | DNA gyrase subunit A TERM 2300 2913196 - 2913160 - T 95 -21 -3.14211 | gap 1, overlap 2913147 2913146 2913166 ACTCGCTTCCACGAA TCGAAAGGCCCCCGGCG GGCA CACCGGGGGCCTT-CGA AGAGCGCTCCTGGAG TERM 2301 2913191 - 2913166 - T 100 -19.7 -3.78329 | overlap 2913160 TTCCACGAATCGAAA GGCCCCCGGCG GGCA CACCGGGGGCC TTCGAAGAGCGCTCC RPD_2597 2913510 - 2913253 - | hypothetical protein TERM 2302 2913622 - 2913633 + H 76 -5.8 -4.55295 | overlap 2913620 CCAATTCAGGTTTCG TCGC TGAG GCGA TTTGTTTCTCCGGCA TERM 2303 2913716 - 2913728 + H 74 -10.5 -3.76952 | opp_overlap 2913715 TGTCCCGAGACAGAC GCGCG AAC CGCGC TTTCGGTTCGATCCG TERM 2304 2913787 - 2913759 - H 82 -6 -4.92385 | gap 1, overlap 2913760 2913782 CACAGCGAAATAAAA CGCCAGATCCGGT CGGA ACCAGATC-GGCT TGCGGGCGTCCTGCC TERM 2305 2913974 - 2913949 - g 86 -9 -4.57569 | opp_overlap 2913939 TCATCCCGGCAAAAA GCCGCTGTTC ACAACG GAAGAGCGGC TGATGATGGTAAAAT coaD 2913821 - 2914318 + | phosphopantetheine adenylyltransferase TERM 2306 2914310 - 2914323 + F 79 -9.5 -4.19238 | opp_overlap 2914308 CTGAAATCCAAATTC GCCGG CTAG CCGGC TTTTCCAATTCGGAG RPD_2599 2914344 - 2914907 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2307 2914920 - 2914950 + G 76 -14.6 -3.16492 | opp_overlap 2914909 2914908, overlap 2914921 TAACCGGCCGCAATG CCGCCGCGCCGACA GGT TGCTGTCGCGGCGG TGTTGATCGCTGTCG RPD_2600 2914917 - 2915360 + | hypothetical protein RPD_2601 2915336 - 2915803 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2308 2915860 - 2915827 - f 79 -8.1 -4.30719 | gap 1, opp_overlap 2915826 2915827 2915829 2915839 2915840, overlap 2915829 CGGCCTCAGAAGAAA GGTGTCATGCCCGGGC TTG ACCCGGGCATC-CATC ATTTGGAGAGCGATG queA 2915950 - 2917032 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 2917029 - 2918171 + | queuine tRNA-ribosyltransferase RPD_2604 2918569 - 2918195 - | hypothetical protein RPD_2605 2918686 - 2918928 + | hypothetical protein RPD_2606 2919819 - 2918938 - | hypothetical protein TERM 2309 2919181 - 2919160 - G 72 -7.3 -4.20696 | gap 1, overlap 2919152 GCAGTAATGCGAAAA CGTG-CCGCA GAA TGCGATCACG ACGATCCAGCCCCAC TERM 2310 2919826 - 2919836 + H 91 -3.2 -5.40072 | overlap 2919822 TCGGGTCATCGGCGG CTGT TCT GCAG TTTTTTTGCCAAGCG RPD_2607 2919996 - 2920397 + | endoribonuclease L-PSP RPD_2608 2920468 - 2920671 + | hypothetical protein TERM 2311 2920957 - 2920986 + T 100 -11.4 -5.06414 | overlap 2920979 TGAGGCTCTCGATCG TGCGCCCCGGAG GTTTCA TTCCTGGGCGCA TTTTTCTTGCGCACC TERM 2312 2921048 - 2921076 + T 93 -18.9 -3.33492 | opp_overlap 2921050, overlap 2921050 CCGCTCTCAAAAGCA AAGACCGGGCTCC ATG GGAGCCCGGTCTC TTGTCGCGTAGCTCG TERM 2313 2921074 - 2921050 - T 100 -21.5 -4.19735 | opp_overlap 2921048 2921050 GCTCTCAAAAGCAAA GACCGGGCTCC ATG GGAGCCCGGTC TCTTGTCGCGTAGCT TERM 2314 2921050 - 2921074 + T 100 -21.5 -3.23572 | opp_overlap 2921050, overlap 2921048 GCTCTCAAAAGCAAA GACCGGGCTCC ATG GGAGCCCGGTC TCTTGTCGCGTAGCT RPD_2609 2921282 - 2921103 - | antenna complex, alpha/beta subunit RPD_2610 2921438 - 2921295 - | antenna complex, alpha/beta subunit RPD_2611 2922193 - 2921603 - | formyl transferase-like TERM 2315 2922024 - 2921991 - G 71 -9.5 -3.78775 | gap 1 GCGGCGACGATCAAA TCGGTGTCCGGCGCGA TCT CCGCGGCGGTCAC-GA GCTTCGGGCTGGCCT RPD_2612 2925175 - 2922488 - | glycosyl transferase family protein TERM 2316 2923438 - 2923411 - G 72 -15 -2.77899 | gap 1, opp_overlap 2923410 2923403, overlap 2923408 CGGCGCGACGAATCA GGCA-CATCGTGC CGT GCACGATGATGCC GTTGGATTCGTTGCG TERM 2317 2925379 - 2925353 - R 75 -12.3 -3.55622 | CTGAACGTTCCGAAA CTGCGCCGG ACTATTTCG CCGGCGCAG AAGAGGGAGCAGTCG RPD_2613 2925974 - 2925363 - | hypothetical protein RPD_2614 2926192 - 2927868 + | putative beta (1-6) glucans synthase RPD_2615 2928208 - 2927828 - | hypothetical protein RPD_2616 2929645 - 2928275 - | hypothetical protein TERM 2318 2929316 - 2929372 + g 76 -15.2 -3.14026 | overlap 2929321 2929353 2929361 GGAGCCGAGCCGTGC GTACAGCCGG-TCGCGGTCGCCGTTGAG CGT CTCGATCGCCGCCGCGAGCCGGCTG-GC TTCGCTCTGGCTCTG TERM 2319 2929321 - 2929368 + g 80 -17 -2.56095 | gap 1, overlap 2929316 2929353 2929361 CGAGCCGTGCGTACA GCCGG-TCGCGGTCGCCGTTGAG CGT CTCGATCGCCGCCGCGAGCCGGC TGGCTTCGCTCTGGC RPD_2617 2929812 - 2931170 + | nucleotidyl transferase RPD_2618 2931317 - 2933143 + | D-fructose-6-phosphate amidotransferase TERM 2320 2933317 - 2933335 + F 74 -10.2 -3.76373 | overlap 2933312 2933318 TGCTAGACTGGACGC ATCGCGGC TTT GCCGCGAA TTTGGATGTTACCGA TERM 2321 2933318 - 2933334 + F 74 -13.7 -2.85503 | overlap 2933312 2933317 GCTAGACTGGACGCA TCGCGGC TTT GCCGCGA ATTTGGATGTTACCG TERM 2322 2933458 - 2933485 + G 70 -4.1 -4.54047 | overlap 2933459 TTTCCTGACCGGCAT CGTGGTCGCAG GCCCCA TTGCGATCACC TTTTATCTGACCTGG RPD_2619 2933363 - 2934148 + | hypothetical protein RPD_2620 2936432 - 2934249 - | DEAD/DEAH box helicase-like TERM 2323 2935258 - 2935222 - G 74 -5.8 -4.46212 | gap 2, opp_overlap 2935235 2935236, overlap 2935223 GTGCCGACCAGAAAA TCGATCTCGCCGGCGGCG AGG CGC-GCCAGC-AGGTCGC GGCGCTCCTTGCCCT TERM 2324 2935235 - 2935272 + g 81 -11.2 -4.07885 | gap 1, opp_overlap 2935223 2935222, overlap 2935236 AATCGATCTCGCCGG CGGCGAGGCGCGCCAGC AGGTC GC-GGCGCTCCTTGCCC TTTTCACGGCCGGTC TERM 2325 2935236 - 2935271 + g 74 -14.7 -3.04517 | gap 1, opp_overlap 2935223 2935222, overlap 2935235 ATCGATCTCGCCGGC GGCGAGGCGCGCCAGC AGGTC GC-GGCGCTCCTTGCC CTTTTCACGGCCGGT TERM 2326 2936461 - 2936477 + H 73 -10.8 -3.60792 | GGCTATATCAACCCC GCCCGG CATGT CCGGGC TTTCGGCGTTCAGCA TERM 2327 2936545 - 2936556 + G 79 -7.2 -4.66318 | overlap 2936543 GCGGGCTCGACGACC GCCG CAAG CGGC TTTTGTTCCGCTGCT RPD_2621 2936505 - 2936795 + | hypothetical protein TERM 2328 2937081 - 2937109 + G 80 -14.6 -3.3676 | gap 1, overlap 2937082 2937089 CGCATTCCGGCATTC TCGCG-CAGCGCG TCAC CGCGCTGGCGCGG TTGTCGCGTCTTGCC TERM 2329 2937082 - 2937108 + G 74 -15.9 -2.61735 | gap 1, overlap 2937081 2937089 GCATTCCGGCATTCT CGCG-CAGCGCG TCAC CGCGCTGGCGCG GTTGTCGCGTCTTGC TERM 2330 2938740 - 2938770 + G 72 -11.9 -3.5594 | overlap 2938738 ACCGGCTGGTGTGCG GCGACGTCGGTTT CGGCA AGACCGAGGTCGC TTTGCGCGCTGCCTT RPD_2622 2936792 - 2940310 + | transcription-repair coupling factor TERM 2331 2940324 - 2940294 - T 73 -11.1 -3.53811 | gap 1, opp_overlap 2940313, overlap 2940295 CCGAGCTCGCCGAAA CCCGCAAGGCGGCC TGAC GGCCGCCT-ACGTG GCGTCAGGACGCCGC RPD_2623 2941551 - 2940328 - | hypothetical protein RPD_2624 2943139 - 2941616 - | putative acid-CoA ligase RPD_2625 2944976 - 2943144 - | extracellular solute-binding protein TERM 2332 2945210 - 2945224 + H 78 -2.8 -5.0538 | overlap 2945188 CCGCGGGGTGCGCGA CCGTTT CAG AAAGGG TTTTTTGCAATGAAG TERM 2333 2945477 - 2945429 - g 77 -13.1 -3.53343 | gap 2, opp_overlap 2945464 2945465 2945467, overlap 2945404 2945430 AAGGCGGCTCCGAAA GCCGGCCCCGCCGC-GCA-GGCG CCCGC CGCCGCGCCGCAGCCGGACCAGC AGGTTCAGCTGATTT TERM 2334 2945471 - 2945430 - g 72 -14.9 -2.71791 | opp_overlap 2945464 2945465 2945467, overlap 2945404 2945429 AGGCGGCTCCGAAAG CCGGCCCCGCCGCGCAGGC GCCC GCCGCCGCGCCGCAGCCGG ACCAGCAGGTTCAGC RPD_2626 2945234 - 2946022 + | invasion associated locus B TERM 2335 2946074 - 2946042 - T 93 -19.2 -3.28712 | opp_overlap 2946042 2946048, overlap 2946048 CGTTTTTCCGCAGAA CGAAAAGGGCGCCC CGGTC GGGCGCCCTTTGCG TTTGGGTTGCTGTGT TERM 2336 2946042 - 2946074 + T 100 -19.2 -3.80189 | opp_overlap 2946042 2946048, overlap 2946048 CGTTTTTCCGCAGAA CGAAAAGGGCGCCC CGGTC GGGCGCCCTTTGCG TTTGGGTTGCTGTGT TERM 2337 2946048 - 2946068 + T 91 -15.4 -3.8698 | opp_overlap 2946048 2946042, overlap 2946042 TCCGCAGAACGAAAA GGGCGCCC CGGTC GGGCGCCC TTTGCGTTTGGGTTG TERM 2338 2946068 - 2946048 - T 100 -15.4 -4.48987 | opp_overlap 2946042 2946048, overlap 2946042 TCCGCAGAACGAAAA GGGCGCCC CGGTC GGGCGCCC TTTGCGTTTGGGTTG RPD_2627 2946478 - 2946146 - | hemimethylated DNA-binding region TERM 2339 2946820 - 2946835 + G 81 -5.4 -4.8048 | gap 1, overlap 2946816 GCTGGCGACCACGCT CG-GCAC TGC GTGCGCG TTTTTCGTCTCCGGG RPD_2628 2946539 - 2947561 + | auxin efflux carrier TERM 2340 2947660 - 2947622 - T 82 -14.8 -3.27771 | overlap 2947626 2947651 GTCAGAACAGGAATA GAAAGTTGCGGTTTTAAT TCA ATCAGAACCGCAACTCTC GCACTCACAGCGATC TERM 2341 2947656 - 2947626 - T 91 -12 -4.27467 | overlap 2947622 2947651 GAACAGGAATAGAAA GTTGCGGTTTTAAT TCA ATCAGAACCGCAAC TCTCGCACTCACAGC RPD_2629 2948861 - 2947665 - | 2-octaprenyl-6-methoxyphenyl hydroxylase RPD_2630 2949011 - 2949745 + | phosphatidylcholine synthase RPD_2631 2949742 - 2950464 + | integral membrane protein TerC RPD_2632 2950565 - 2951539 + | zinc-binding alcohol dehydrogenase RPD_2633 2953062 - 2951737 - | hypothetical protein TERM 2342 2952855 - 2952879 + g 71 -12.2 -3.27476 | gap 1 TGCCGTTGGCGGCCA TCGCTTCGCCG ATCG CGGCG-AGCGA TTCCTGCTTGGCGCT RPD_2634 2954238 - 2953474 - | hypothetical protein RPD_2635 2955276 - 2954269 - | allophanate hydrolase subunit 2 RPD_2636 2956001 - 2955273 - | hypothetical protein RPD_2637 2956225 - 2956938 + | hypothetical protein RPD_2638 2956956 - 2957363 + | cupin 2, barrel TERM 2343 2957384 - 2957420 + T 100 -20.3 -4.41494 | opp_overlap 2957390 ACCGCGGAACTGGTT TGACAAGGGCCTTGCCG CGA TGGCAAGGCCCTTCTCA TTTTGGTTCAGGATA TERM 2344 2957414 - 2957390 - T 91 -17.2 -3.29461 | opp_overlap 2957384 GAACTGGTTTGACAA GGGCCTTGCC GCGAT GGCAAGGCCC TTCTCATTTTGGTTC RPD_2639 2958303 - 2957452 - | hypothetical protein TERM 2345 2958098 - 2958138 + g 81 -16.1 -3.14132 | overlap 2958074 TCGTCAGCGGCGTCG TCCGGCTCGATTCGCGG GCGCTTG CCGCGCTTCGGGCCGGA TTCGTAGACACCAGG TERM 2346 2958452 - 2958438 - H 71 -8.5 -3.84451 | GTCGGCAAAGGGAAA GGCGC TCGGC GCGCC GCTGCCTGGCACCCG RPD_2640 2958573 - 2959463 + | dihydrodipicolinate synthase RPD_2641 2959532 - 2959963 + | large conductance mechanosensitive channel protein TERM 2347 2960443 - 2960426 - g 72 -6.9 -4.29139 | overlap 2960427 GGAAACCGAAAAGAA GCGCGAC TGGA GTCGCGA GAAAGGCCGGCTGTT smpB 2960001 - 2960474 + | SsrA-binding protein RPD_2643 2960588 - 2961163 + | BcpB protein RPD_2644 2961927 - 2961250 - | uracil-DNA glycosylase superfamily protein RPD_2645 2962615 - 2961929 - | hypothetical protein TERM 2348 2962689 - 2962699 + H 81 -4 -4.99043 | ACGAAGCATCGACCG GTAT TCT ATAC TTTTCTTTCTGAAAA RPD_2646 2962901 - 2963293 + | DNA-directed RNA polymerase subunit omega TERM 2349 2963330 - 2963361 + F 95 -10 -4.56597 | opp_overlap 2963327 2963329 2963330, overlap 2963335 GACCTCCCGAAACAG CTTCGCGGCCCGGA TCAG TCCGGGCCGTTTGG TTTTTGCCGCGAGAG TERM 2350 2963335 - 2963356 + F 100 -17.3 -4.32046 | opp_overlap 2963327 2963330 2963329, overlap 2963330 CCCGAAACAGCTTCG CGGCCCGGA TCAG TCCGGGCCG TTTGGTTTTTGCCGC TERM 2351 2964354 - 2964372 + G 76 -8.8 -4.2349 | CACCGCCGAGGTGAC CGGCCG GCGCAAG CGGCCG TTTTCGATCTGGACC RPD_2647 2963542 - 2965830 + | RelA/SpoT family protein RPD_2648 2965908 - 2966672 + | pyridoxal phosphate biosynthetic protein PdxJ acpS 2966669 - 2967088 + | 4'-phosphopantetheinyl transferase RPD_2650 2967350 - 2968108 + | peptidase S26A, signal peptidase I TERM 2352 2968334 - 2968315 - g 81 -15 -3.53012 | GTCTCGGCGCTGAAA TCGGCGCG CAAT CGCGCCGA TAGCTATCAGCGGCT RPD_2651 2968105 - 2968920 + | ribonuclease III era 2968913 - 2969836 + | GTP-binding protein Era RPD_2653 2969847 - 2970227 + | hypothetical protein TERM 2353 2970804 - 2970775 - g 77 -13.5 -3.53224 | gap 1, opp_overlap 2970798, overlap 2970776 TACGTCTCCCCGAAA TCCGGCAGCGC-CG TGT CGCGCGCCGCCGGC GAGCCGTGGCGCGAC TERM 2354 2970803 - 2970776 - g 80 -17 -2.71791 | gap 1, opp_overlap 2970798, overlap 2970775 ACGTCTCCCCGAAAT CCGGCAGCGC-CG TGT CGCGCGCCGCCGG CGAGCCGTGGCGCGA TERM 2355 2970798 - 2970840 + G 86 -17.8 -3.14132 | opp_overlap 2970776 2970775 2970822 CGCCGTGTCGCGCGC CGCCGGCGAGCCGTGGC-GC GACAA GCTGCTGCGGCT-GCCGGCG TTCCTGCGCGACGAC recO 2970277 - 2971026 + | DNA repair protein RecO TERM 2356 2972817 - 2972831 + G 70 -11.4 -3.4252 | overlap 2972811 AAGCTGCTGCTGCTG GCGACC AAC GGTCGC TTCTACTCGCTCGAC TERM 2357 2972915 - 2972933 + G 71 -12.4 -3.25823 | CGACATGGAGCAGGA CGCCGCGA TCG TCGCGGTG TTCGTGTACAAGGGC RPD_2655 2971131 - 2973392 + | DNA topoisomerase IV subunit A TERM 2358 2973387 - 2973418 + T 86 -15.2 -3.5774 | TTCGGCCGCGGCATC GAGTGATCGCGGCG CCAG CGGCGTGATCACTC TTTAGAGCATTGGCT RPD_2656 2973732 - 2973448 - | hypothetical protein TERM 2359 2973681 - 2973666 - G 79 -3.2 -5.00616 | TTGTGCGCGAAAAAA CGCCTC GAGG AAAGCG CAATGGCGTCGGTGA RPD_2657 2973889 - 2975271 + | manganese transport protein MntH RPD_2658 2976135 - 2975362 - | arginyl-tRNA-protein transferase TERM 2360 2975552 - 2975563 + g 77 -5.8 -4.63218 | opp_overlap 2975549 AGGATCATGAAGGTG CCGA GCGA TCGG TTTTGTTCGCCGGGC RPD_2659 2976763 - 2976206 - | hypothetical protein RPD_2660 2977953 - 2976901 - | delta-aminolevulinic acid dehydratase TERM 2361 2978204 - 2978165 - g 72 -14.4 -3.01712 | gap 2, overlap 2978147 2978144 GTCGCCGCGCGAACA CGC-ACCG-CGCGACCCC TCGATC GGGGTCGCGGCGATCGCG CCCGAGCGCGACGAG RPD_2661 2978133 - 2978603 + | hypothetical protein RPD_2662 2978691 - 2980256 + | acyl-CoA synthetase RPD_2663 2980587 - 2981105 + | MarR family transcriptional regulator TERM 2362 2981214 - 2981237 + F 100 -14.6 -5.4505 | CCGTCGTCTTCATCA TCGGCTCTCC GCAA GGGGAGCCGA TTTTTTCTTGCGCCG RPD_2664 2981330 - 2981557 + | hypothetical protein RPD_2665 2981574 - 2981789 + | hypothetical protein RPD_2666 2982155 - 2981817 - | hypothetical protein TERM 2363 2982145 - 2982161 + g 75 -5 -4.62471 | overlap 2982147 CGCGCTCGCCTCGAC GGCGCG CCCAC CGCGGC TTTTTCCGGCTTCGG RPD_2667 2982574 - 2982780 + | hypothetical protein RPD_2668 2982796 - 2983476 + | glutathione S-transferase-like RPD_2669 2983993 - 2983595 - | PilT protein-like RPD_2670 2984226 - 2983993 - | hypothetical protein glyA 2984488 - 2985789 + | serine hydroxymethyltransferase TERM 2364 2985997 - 2985965 - g 100 -21.3 -2.91274 | CCCAGGTGAAGGATA GCCGGCCCACCGAGG ATT CCTCGGTGATCCGGC GGCGGCGCGTCTGCA RPD_2672 2985919 - 2986401 + | transcriptional regulator NrdR TERM 2365 2987239 - 2987263 + G 72 -14.9 -2.79183 | AAGCGGCGGCCGCAA CGCGCCTCGGC GCG GCCGGGGCGCA TGTGATCCACGTCGC RPD_2673 2986398 - 2987588 + | riboflavin biosynthesis protein RibD TERM 2366 2987667 - 2987644 - g 75 -4.5 -4.70659 | opp_overlap 2987662 2987663 GGCGAGATCGAAAAA CTGACCCCG GTGGCG CAAGGCCAG CTGCATCGGCTGCGC RPD_2674 2987602 - 2988210 + | riboflavin synthase subunit alpha TERM 2367 2988324 - 2988304 - f 70 -12.6 -2.85545 | overlap 2988301 2988299 TTCCGAACAAGATGA TTGCCGGG TCGAG CCCGGCAA TGACGATCAAAGGCA TERM 2368 2988800 - 2988775 - g 77 -12.5 -3.65046 | gap 1 CGGCGACCTCAACAA GGGCGGCGACGC CGC GCG-CGCCGCAC TGGCGATGCTGCGGA ribH 2988350 - 2988841 + | riboflavin synthase subunit beta nusB 2988844 - 2989368 + | transcription antitermination protein NusB TERM 2369 2989470 - 2989413 - f 93 -19.9 -3.10715 | opp_overlap 2989447 2989448, overlap 2989417 2989421 2989436 CGGATTACGAGCGAA GCGAGCAAGTCCGGAATCCATAACCCC TGCA GGGAGTATGGATTCCGGGCCTGCGCCC CGAGGGGCGCATCCC TERM 2370 2989466 - 2989417 - f 100 -22.3 -2.55544 | opp_overlap 2989447 2989448, overlap 2989413 2989421 2989436 TTACGAGCGAAGCGA GCAAGTCCGGAATCCATAACCCC TGCA GGGAGTATGGATTCCGGGCCTGC GCCCCGAGGGGCGCA TERM 2371 2989462 - 2989421 - f 91 -18.1 -3.22388 | opp_overlap 2989447 2989448, overlap 2989417 2989413 2989436 GAGCGAAGCGAGCAA GTCCGGAATCCATAACCCC TGCA GGGAGTATGGATTCCGGGC CTGCGCCCCGAGGGG RPD_2677 2989514 - 2990485 + | thiamine-monophosphate kinase TERM 2372 2991357 - 2991400 + G 72 -14.4 -3.02829 | opp_overlap 2991327 2991357 2991358 CACGATCGCCGACAA CGTCGGCGACAACGTCGGCG ACTG CGCCGGCATGGCCGCCGACC TGTTCGAGACCTATG TERM 2373 2991400 - 2991357 - g 82 -16.6 -3.30441 | opp_overlap 2991357, overlap 2991327 2991358 CACGATCGCCGACAA CGTCGGCGACAACGTCGGCG ACTG CGCCGGCATGGCCGCCGACC TGTTCGAGACCTATG TERM 2374 2991399 - 2991358 - g 95 -20.1 -2.5805 | opp_overlap 2991357, overlap 2991327 2991357 ACGATCGCCGACAAC GTCGGCGACAACGTCGGCG ACTG CGCCGGCATGGCCGCCGAC CTGTTCGAGACCTAT TERM 2375 2992767 - 2992749 - g 76 -16 -2.83271 | overlap 2992746 2992751 CGACCCCTACAAGGA CACCGCGG GCC CCGCGGTG AACCCGATGATCAAG hppA 2990710 - 2992830 + | membrane-bound proton-translocating pyrophosphatase TERM 2376 2992894 - 2992843 - f 100 -21.9 -3.91798 | opp_overlap 2992858, overlap 2992831 2992844 2992853 2992858 TAAGCGTCAAGCAAA CGCTCCAAAAC-AAAACCCCGCGGC GCGA GCCGCGGGGTTTTTGTTTTGG-GCT GGGCTGATAAGATGC TERM 2377 2992893 - 2992844 - f 100 -25.4 -2.94597 | opp_overlap 2992858, overlap 2992831 2992843 2992853 2992858 AAGCGTCAAGCAAAC GCTCCAAAAC-AAAACCCCGCGGC GCGA GCCGCGGGGTTTTTGTTTTGG-GC TGGGCTGATAAGATG TERM 2378 2992884 - 2992853 - f 100 -18.8 -4.12942 | opp_overlap 2992858, overlap 2992844 2992843 2992858 GCAAACGCTCCAAAA CAAAACCCCGCGGC GCGA GCCGCGGGGTTTTT GTTTTGGGCTGGGCT TERM 2379 2992879 - 2992858 - f 100 -18.7 -5.07652 | opp_overlap 2992858, overlap 2992853 2992844 2992843 CGCTCCAAAACAAAA CCCCGCGGC GCGA GCCGCGGGG TTTTTGTTTTGGGCT TERM 2380 2992858 - 2992879 + F 100 -18.7 -5.46706 | opp_overlap 2992853 2992844 2992843 2992858 CGCTCCAAAACAAAA CCCCGCGGC GCGA GCCGCGGGG TTTTTGTTTTGGGCT RPD_2679 2992933 - 2993799 + | alpha/beta hydrolase fold TERM 2381 2993981 - 2993993 + F 76 -6.3 -4.45544 | GTCCGGCGGCGTTCT TGTGT TGG ACACA TTTTCGTTGCTAACG RPD_2680 2994179 - 2995360 + | secretion protein HlyD TERM 2382 2998408 - 2998429 + G 70 -11.6 -3.35996 | overlap 2998408 GCTCGGCGGCATGAT CACCGCGA CCGTGC TCGCGGTG TTCTGGGTCCCGGTG RPD_2681 2995391 - 2998540 + | hydrophobe/amphiphile efflux-1 HAE1 RPD_2682 2999137 - 2998661 - | SmpA/OmlA TERM 2383 2999679 - 2999664 - g 70 -6 -4.2349 | opp_overlap 2999672 CGCCGACATTGAAAA CGCGCG TCGG CTCGCG GCCTATGTCGGGCAG RPD_2683 2999236 - 2999775 + | ubiquinol-cytochrome C chaperone RPD_2684 2999793 - 3000356 + | hypothetical protein RPD_2685 3000589 - 3001650 + | putative glycerol-3-phosphate acyltransferase PlsX RPD_2686 3001647 - 3002624 + | 3-oxoacyl-(acyl carrier protein) synthase III RPD_2687 3002757 - 3003128 + | integration host factor, alpha subunit TERM 2384 3003203 - 3003220 + G 71 -12.7 -3.29511 | overlap 3003218 GACGAACTGGACATT CCGCAGC ATGT GCTGCGG TTCTGGGAGACTCGG RPD_2688 3003143 - 3003832 + | regulatory protein, MerR RPD_2689 3004164 - 3004595 + | hypothetical protein TERM 2385 3004639 - 3004659 + T 77 -14 -3.28712 | opp_overlap 3004639 CAAGCCGACAACGAA CCGCCCTC GCGAG GAGGGCGG TTGTCAGAAACCAAG TERM 2386 3004659 - 3004639 - T 79 -14 -3.45832 | opp_overlap 3004639 CAAGCCGACAACGAA CCGCCCTC GCGAG GAGGGCGG TTGTCAGAAACCAAG RPD_2690 3005048 - 3004731 - | hypothetical protein RPD_2691 3005281 - 3006249 + | short-chain dehydrogenase/reductase SDR TERM 2387 3007103 - 3007131 + G 81 -16.7 -3.14051 | overlap 3007101 3007110 CCTGATGCATCACGG CCGCGCCGGGC TGCTGGC GCTCGGCGCGG TGTTCCTCACCGTGA TERM 2388 3008054 - 3008067 + G 77 -8.1 -4.37886 | ACGATCCTCGGTGGA GGTCG TCAA CGACC TTTTCTCGCGGATCG RPD_2692 3006438 - 3008342 + | K+ potassium transporter RPD_2693 3008335 - 3009126 + | hypothetical protein TERM 2389 3009170 - 3009122 - T 73 -11.1 -3.57462 | opp_overlap 3009128, overlap 3009123 3009126 3009156 TATCGTATGGGGAAA CGTAGAGCTTTCTCGGTTCTGAT AGA ATCAGAACCGGAAACGCTCTAAT ACGCGTTCTCGCCCT TERM 2390 3009169 - 3009123 - T 75 -14.6 -2.74263 | opp_overlap 3009128, overlap 3009122 3009126 3009156 ATCGTATGGGGAAAC GTAGAGCTTTCTCGGTTCTGAT AGA ATCAGAACCGGAAACGCTCTAA TACGCGTTCTCGCCC TERM 2391 3009166 - 3009126 - T 80 -16.3 -2.64803 | opp_overlap 3009128, overlap 3009123 3009122 3009156 GTATGGGGAAACGTA GAGCTTTCTCGGTTCTGAT AGA ATCAGAACCGGAAACGCTC TAATACGCGTTCTCG RPD_2694 3010695 - 3009166 - | sugar transferase TERM 2392 3010825 - 3010804 - R 82 -2.9 -5.12707 | overlap 3010805 GTAAATTGCAAAAAA CCGTTAGCG CAGG CGCTAAAGC TTAACGATCTATGAA RPD_2695 3011962 - 3010826 - | glycosyl transferase, group 1 TERM 2393 3010914 - 3010893 - G 72 -4.4 -4.56597 | overlap 3010894 3010901 3010904 GCCTTCTGGGAAAAA TGCAGGAA GATCCG CTCCCGCA GAACGCGGGCGCGCT TERM 2394 3011042 - 3011086 + g 74 -14.9 -3.05596 | gap 1 GAATATCTCCGGGAT GCCGCCGACATTGGCG-GCC ACCATC GGCACGCCGGCGGCGGCGGC TTCGATCACGACATA RPD_2696 3012554 - 3011964 - | polysaccharide export protein TERM 2395 3012259 - 3012238 - G 71 -15.1 -2.60075 | overlap 3012237 GGCTCGCGAATGAAG CCGCCGCGC AACC GCGCGGCGA TCTCGCCGGCGAGAC TERM 2396 3012792 - 3012780 - g 70 -10.5 -3.62859 | opp_overlap 3012785, overlap 3012781 AGGACAAGGCGGAAA GCGGC GAT GCCGC GTCGCCGGGCAGCGC TERM 2397 3013241 - 3013231 - g 87 -6.8 -4.99643 | overlap 3013233 GATCAAAAAAAACAA GCTC GCA GAGC GTCCTGAGTTCGACC TERM 2398 3013521 - 3013492 - g 73 -12.7 -3.40403 | opp_overlap 3013489 GGTGCTGCAGCAGAA CGCGCGGCAGGCG CAGG CGCGCGCCGCGGG CCAGTGGCTGTCCGG RPD_2697 3012737 - 3015046 + | lipopolysaccharide biosynthesis TERM 2399 3015080 - 3015100 + T 81 -10.4 -4.17309 | opp_overlap 3015080 3015078 CAATGGCAAGCAAGA TGCCCGGG CAGGT CTCGGGCA TTGTTGTTTGTCGTG RPD_2698 3016362 - 3015160 - | hypothetical protein TERM 2400 3016293 - 3016335 + g 70 -13.3 -3.05384 | gap 1 CGACGCGCGCAATCC GGCCGGGCTGC-GCCGACGC CGCC GCGTGGCCCGCGGACCGGCC TTCGCTCAGCACGGC TERM 2401 3017262 - 3017290 + G 85 -15.4 -3.64103 | gap 1 GGCCGCGCCGTGCTG TGCGCAGCGCTCG GCCG CGA-CGCTGCGCA TTTCGCCTATCCGTA TERM 2402 3017450 - 3017481 + G 100 -12.2 -4.4017 | gap 1, overlap 3017453 GATCGCATGGGACGG CCG-CCGCCGCTCGC TGC GCGGGCTGCGGGTGG TTTTGTCGGGATTGA TERM 2403 3017453 - 3017477 + G 71 -14.9 -2.50077 | overlap 3017450 CGCATGGGACGGCCG CCGCCGCTCGC TGC GCGGGCTGCGG GTGGTTTTGTCGGGA RPD_2699 3016488 - 3017534 + | polysaccharide deacetylase RPD_2700 3017737 - 3017528 - | hypothetical protein RPD_2701 3017834 - 3018922 + | cytochrome oxidase assembly RPD_2702 3019541 - 3018939 - | hypothetical protein RPD_2703 3020847 - 3019567 - | O-acetylhomoserine aminocarboxypropyltransferase RPD_2704 3021544 - 3020960 - | CoA-binding RPD_2705 3022437 - 3021610 - | enoyl-CoA hydratase RPD_2706 3022527 - 3022955 + | phenylacetic acid degradation-like protein rplM 3023110 - 3023574 + | 50S ribosomal protein L13 rpsI 3023576 - 3024052 + | 30S ribosomal protein S9 TERM 2404 3024073 - 3024104 + F 86 -15.2 -3.53811 | opp_overlap 3024079, overlap 3024079 CGCTTCATCGTCATT CGGAAAGGGCGTCC TTCG GGGCGCCCTTTTTG TTTGGGCGCACTGCA TERM 2405 3024098 - 3024079 - f 70 -10.6 -3.57263 | opp_overlap 3024073 3024079 ATCGTCATTCGGAAA GGGCGTCC TTCG GGGCGCCC TTTTTGTTTGGGCGC TERM 2406 3024079 - 3024098 + F 100 -12.8 -5.27335 | opp_overlap 3024079, overlap 3024073 ATCGTCATTCGGAAA GGGCGTCC TTCG GGGCGCCC TTTTTGTTTGGGCGC TERM 2407 3024106 - 3024125 + F 73 -2.8 -4.788 | gap 1 GGGCGCCCTTTTTGT TTG-GGCGC ACT GCACCGCAA TTTTTCGCTTCATTT RPD_2709 3024284 - 3025519 + | GGDEF domain-containing protein RPD_2710 3025600 - 3025902 + | antibiotic biosynthesis monooxygenase RPD_2711 3027073 - 3025886 - | hypothetical protein TERM 2408 3026157 - 3026146 - G 72 -7.2 -4.26076 | overlap 3026117 3026147 GGACGCCGAGGAAAA GCGC GAAC GCGC AGAGCACGGCGAACC TERM 2409 3027033 - 3027053 + g 83 -3.9 -5.14563 | ACACGATCGAGCAAA GGGATGGTC ACG GGCTGTTCC TTTTTTGGTCGGCCG TERM 2410 3027326 - 3027363 + G 73 -12.8 -3.44146 | gap 3, overlap 3027328 AGCGAGATTCGTATG GC-CGCGCCGCGCGAGCGG TTG CCGCT-GCG-GGTGCGTGC TTGGTTCTCGCCAAC TERM 2411 3027328 - 3027360 + G 71 -14.2 -2.87274 | gap 2, overlap 3027326 CGAGATTCGTATGGC CGCGCCGCGCGAGCGG TTG CCGCT-GCG-GGTGCG TGCTTGGTTCTCGCC RPD_2712 3027298 - 3028242 + | rare lipoprotein A RPD_2713 3029200 - 3028253 - | alpha/beta hydrolase fold TERM 2412 3028708 - 3028673 - G 71 -12.6 -3.33162 | gap 1, overlap 3028649 CACCGGATCGGAGAA GCCGCCGCCGAGGATGC CAC GCATCGTCAGCG-CGAC GTCGCGCTCCAGTTC TERM 2413 3028892 - 3028874 - G 70 -8.8 -3.90744 | GTCCGGCCGAAACAA CGCCGCAT GCC ACGCGACG GGCGCGCCCCAGTCG TERM 2414 3029331 - 3029289 - H 79 -8.2 -4.3208 | CGCCACAATCGAAAA CGGTCCGCCGCTACCACTCC GCC GGATGGGTAGGGATGGTCCG CGCGCCCGTTGAAAG RPD_2714 3029324 - 3030622 + | Serine-type D-Ala-D-Ala carboxypeptidase RPD_2715 3030625 - 3031383 + | thymidylate kinase RPD_2716 3031380 - 3032420 + | DNA polymerase III subunit delta' RPD_2717 3032500 - 3034044 + | methionyl-tRNA synthetase RPD_2718 3034049 - 3034840 + | TatD-related deoxyribonuclease RPD_2719 3034865 - 3035665 + | putative hydrolase TERM 2415 3035804 - 3035759 - T 81 -11.7 -3.88232 | gap 1, opp_overlap 3035787 TGCCCCACACAACAA CCTCGAGATCCCGGGTTCGCGC TCC GCGCGC-CCCGGAATGACGCGG GCGTTAGTCCGAAAT RPD_2720 3037457 - 3035808 - | acyl-CoA synthetase RPD_2721 3039394 - 3037511 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 2416 3038459 - 3038411 - G 77 -12.9 -3.54424 | overlap 3038416 CTTCATCTCTGGAAA CAGCACCGGCGCCACCGCCGCCA TAT CGGCGGCCTTGGAGCCGGAAATG CCGGAGACCAGATAC TERM 2417 3038454 - 3038416 - G 86 -18 -2.84325 | overlap 3038411 TCTCTGGAAACAGCA CCGGCGCCACCGCCGCCA TAT CGGCGGCCTTGGAGCCGG AAATGCCGGAGACCA TERM 2418 3039290 - 3039250 - G 73 -14.8 -2.84325 | gap 1, overlap 3039235 3039247 3039245 CGCCGGCAAATAGCA CGACGATCTCCGCGACCAC CAGC ATGGCCGCGGGGATC-TCG ACCAGCAGACCGAGC RPD_2722 3040423 - 3039404 - | TRAP dicarboxylate transporter, DctP subunit TERM 2419 3041141 - 3041175 + G 72 -7 -4.19238 | opp_overlap 3041164, overlap 3041138 ACTGTCACCACCGGT CAGCAGAGCGACCTGT TGG ACAACACGCTCTGCGG TTTTGGCATTCAGAC RPD_2723 3041015 - 3042118 + | UDP-N-acetylglucosamine 2-epimerase RPD_2724 3042136 - 3043629 + | bacteriophage N4 adsorption protein B TERM 2420 3044875 - 3044851 - g 70 -10 -3.6968 | gap 1 CGACAACGTCAAGAA GGCGGTGGCCG AGAT CGA-CACCGCC ACGGCGCCGGGACAG TERM 2421 3045367 - 3045334 - g 73 -12.3 -3.39449 | opp_overlap 3045334 CGCCATCAACATCAA GCCGACCACGTCCGG CTAT CTGGACGCCGCCGGC ACCTTCATCCTGACC TERM 2422 3046189 - 3046171 - g 80 -16 -3.25823 | GGTCGGCGACACCAA GCGCCAGC AGG GCTGGCGC GGCAAGATCATCCTT RPD_2725 3043643 - 3046213 + | TPR repeat-containing protein TERM 2423 3046232 - 3046271 + T 76 -5.5 -4.56597 | gap 1, overlap 3046233 TCCTGATCCGGATCG AGAGCCCGACCGGATCGC TGCAT GCGA-CCGGCGGGGCCCA TTTTTCGGCGCGCCG TERM 2424 3046281 - 3046293 + T 85 -10.5 -4.26076 | GGCCCATTTTTCGGC GCGCC GTC GGCGC TTTTCGTCAGCCTGC RPD_2726 3046976 - 3046317 - | hypothetical protein TERM 2425 3047362 - 3047377 + G 78 -10.4 -4.08767 | CCTTCTTCTCGTCTC CGCCAG CGTT CTGGCG TTTTCCGCCACTGCG RPD_2727 3047336 - 3048784 + | curlin associated TERM 2426 3048940 - 3048971 + G 70 -10.9 -3.54424 | gap 3 TTATTCCTGATTTCG GCCAGCGCGCTGGCGC TGA GCGCC-GCG-GC-GGC TTTCGCCAACTCCAA TERM 2427 3049336 - 3049319 - g 74 -9.8 -3.78775 | TTCGCCAGGACCAAA CCGCGC AGGCCA GCGCGG TCGATCTCAGCCAGA RPD_2728 3048913 - 3050217 + | curlin associated TERM 2428 3050271 - 3050221 - f 72 -14 -2.80016 | gap 1, opp_overlap 3050220, overlap 3050218 3050250 GTTCAGCATTAACGA CGGGTCGCCGCACCTCGGT-CTT GCACAA AGGTACCGAGATGCGGCCTCCCG ATATCATAGGAGGCT RPD_2729 3050291 - 3050611 + | hypothetical protein RPD_2730 3050608 - 3051117 + | putative minor curlin subunit precursor (fimbrin sef17 minor subunit) RPD_2731 3051114 - 3051524 + | hypothetical protein RPD_2732 3051549 - 3052490 + | putative curli production assembly/transport component csgg precursor TERM 2429 3052738 - 3052708 - g 72 -8.9 -4.07568 | gap 1, opp_overlap 3052691 3052689, overlap 3052691 3052693 GGCCGCGGGCGAAAA CGGCCTGCCGCCGG TCTT CCTGCG-CAGGCTG CTCCATCAGGAAAGC RPD_2733 3052493 - 3053233 + | lytic transglycosylase, catalytic RPD_2734 3053548 - 3053234 - | hypothetical protein RPD_2735 3053573 - 3053860 + | hypothetical protein RPD_2736 3054910 - 3053888 - | hypothetical protein TERM 2430 3055124 - 3055103 - R 70 -7.9 -4.00934 | gap 1, opp_overlap 3055102, overlap 3055096 ACGCCAAATACGAAA CGCAGCAGCC ACC GGCGGC-GCG GTCTGTCAGCACGGA TERM 2431 3055206 - 3055229 + r 70 -11.7 -3.20164 | gap 1, overlap 3055217 TCAGCTGACGCAGCC CGGTCGCCCG ATCAA CGGGCG-CCG TTCGATTGCGTGTCC RPD_2737 3055531 - 3055256 - | hypothetical protein TERM 2432 3055385 - 3055352 - G 70 -8.9 -3.95324 | gap 1, overlap 3055379 GAGCCCGAAGAACAA CAGCGCCATCACCTGA GCC TCAGGAGATC-CGCTG AGAACGAAAAAGGCA RPD_2738 3056369 - 3055950 - | histone-like nucleoid-structuring protein H-NS TERM 2433 3057655 - 3057634 - H 72 -13.7 -2.75064 | overlap 3057586 3057631 CGCTGGAGGCAAGCA GCGCAGACC TTCA GGTCCGCGC GCGGCTCGCTACAAT TERM 2434 3058627 - 3058600 - g 75 -7 -4.39696 | gap 1, overlap 3058602 CCGGAAATGAAGAAA GGCG-ACGACG TGACGGT CGCCGTGCGCC TGACCAACAAGGCCA TERM 2435 3058659 - 3058638 - g 91 -17.3 -3.71848 | opp_overlap 3058628 3058652, overlap 3058651 3058652 GCGCCTGACCAACAA GGCCACCGG CAAA CCGGTGGCC GACGCCGTCATCTTC RPD_2739 3058480 - 3058875 + | hypothetical protein TERM 2436 3058882 - 3058904 + F 100 -17.7 -3.922 | opp_overlap 3058875 GTCAAGTAGGCCGGA GGGCGCCGC CCGCC GCGGCGCCC TTTCCTTCCGGATTT RPD_2740 3058959 - 3060347 + | secretion protein HlyD RPD_2741 3060344 - 3063475 + | heavy metal efflux pump CzcA TERM 2437 3063568 - 3063598 + T 75 -13.8 -3.02461 | opp_overlap 3063564 TGGAGAGCAATTGGA CGATCCGGCGCCGC TGA GCGGCGCCGGTGGG TGTTGCGCGGCGTTG RPD_2742 3064159 - 3063635 - | triple helix repeat-containing collagen RPD_2743 3064417 - 3066483 + | UvrD/REP helicase RPD_2744 3066817 - 3066500 - | hypothetical protein RPD_2746 3067181 - 3067906 + | nitrile hydratase, alpha subunit RPD_2747 3067906 - 3068562 + | nitrile hydratase RPD_2748 3068562 - 3068954 + | hypothetical protein TERM 2438 3069351 - 3069314 - g 70 -6.1 -4.19238 | gap 1, overlap 3069315 GTTCCAATCCGAAAA CTGGCTGTCGCCCTGGCT CAA AGGCCTGGCGCCAGCC-G CCGATGTGGAACCGC TERM 2439 3069559 - 3069531 - g 93 -10.1 -4.58663 | ACCACCCCGGAAAAA GCCGCCGAGGCGT TCG ACGCCGCGCTGGC GGTGATGCCGCCGGT TERM 2440 3069750 - 3069734 - g 70 -10.1 -3.63968 | overlap 3069735 GCGCAAATTCCGAAA GGCGCTG CGC CAGCACC ACCGCGCACTCGATG TERM 2441 3069818 - 3069799 - g 70 -11.4 -3.44051 | gap 1 CGCGGATGATCACAA GCGGCGCCG AAG CGG-GCCGC CTGCTGGACCGTCTC TERM 2442 3070196 - 3070167 - g 100 -9.9 -5.32882 | gap 1, overlap 3070169 TACGACTACAAAAAA CGGC-TCGGCTGCG AAG CGCAGCCGCTGCTG GCGCTGGAAAAAGCG RPD_2749 3069162 - 3070304 + | hypothetical protein RPD_2750 3071590 - 3070277 - | beta-lactamase RPD_2751 3072308 - 3071592 - | ExsB mazG 3072422 - 3073258 + | nucleoside triphosphate pyrophosphohydrolase RPD_2753 3073343 - 3074638 + | hypothetical protein TERM 2443 3074656 - 3074620 - f 73 -11.5 -3.60296 | gap 1 GACCCGGAGCGCAAA CGCGGAGGCTGTGGCG TGACAC CGCCGCTGCCTCC-CG GCACGGCCGGGAGCA RPD_2754 3074635 - 3075003 + | hypothetical protein TERM 2444 3075054 - 3075018 - T 74 -12.2 -3.53091 | gap 1 ACCGCCCCCCTGAAA CGGCAACGGCCGCCCGG TTGC CCAGGCAGCCGC-GCAG GTCCCCACCCGCCGA RPD_2755 3075583 - 3075074 - | single-strand DNA-binding protein RPD_2756 3076065 - 3076790 + | putative outer membrane protein TERM 2445 3076816 - 3076842 + F 74 -14.5 -2.64803 | opp_overlap 3076820 3076821, overlap 3076821 ACTAATTTGAGACAC GAAAGGCCGGC CTCGC GCCGGCTTTTC TGCGTTTGCGGCTCG TERM 2446 3076821 - 3076837 + F 95 -10.8 -4.51196 | opp_overlap 3076821 3076820, overlap 3076816 TTTGAGACACGAAAG GCCGGC CTCGC GCCGGC TTTTCTGCGTTTGCG RPD_2757 3076848 - 3077120 + | hypothetical protein TERM 2447 3077968 - 3077950 - g 89 -2.4 -5.34365 | gap 1, overlap 3077951 CGACAAGAAGAAAAA GGCCGAC AAGAAG GTCG-CC AAGATTCACGACAAG TERM 2448 3079279 - 3079261 - g 80 -13.8 -3.68222 | CCGCAAGCTGAACAA CGCCAGCG AGC CGCCGGCG CCGCACGACCGCATC uvrA 3077117 - 3080143 + | excinuclease ABC subunit A RPD_2759 3080706 - 3080353 - | hypothetical protein RPD_2760 3080809 - 3082146 + | hypothetical protein RPD_2761 3082276 - 3082641 + | hypothetical protein TERM 2449 3083118 - 3083139 + G 84 -13.7 -3.92143 | gap 1, overlap 3083120 CTCTTTTCTGGCGCC GCTCGCCGGC GAG GCCGGCG-GC TTTCTGCGAATTTTG TERM 2450 3083120 - 3083138 + G 72 -13.8 -2.94563 | overlap 3083118 CTTTTCTGGCGCCGC TCGCCGGC GAG GCCGGCGG CTTTCTGCGAATTTT RPD_2762 3082825 - 3083601 + | Ion transport 2 RPD_2763 3083838 - 3083710 - | hypothetical protein RPD_2764 3083971 - 3084492 + | hypothetical protein RPD_2765 3084726 - 3085016 + | hypothetical protein TERM 2451 3085128 - 3085149 + G 71 -13.7 -2.87931 | opp_overlap 3085111 3085110 GCCGGACGGCTTTCA GCCGTTCGC CGTC GCGGACGGC TATATCGGCCATAAC TERM 2452 3085263 - 3085275 + G 71 -9.1 -3.86015 | overlap 3085259 CGTGCTGCACGGCGG CGCGA TCG TCGCG TTTCTCGACACCATC RPD_2766 3085099 - 3085506 + | thioesterase superfamily protein RPD_2767 3086102 - 3085740 - | hypothetical protein RPD_2768 3086878 - 3086102 - | hypothetical protein RPD_2769 3087399 - 3086875 - | regulatory protein, MarR TERM 2453 3087754 - 3087773 + r 76 -10.6 -3.84719 | opp_overlap 3087754 ATGAACCAAGAAAAA GGCCCCGG AAAA CCGGAGCC TTTGACTTTCAACAT TERM 2454 3087773 - 3087754 - R 100 -12.8 -5.20534 | opp_overlap 3087754 ATGAACCAAGAAAAA GGCCCCGG AAAA CCGGAGCC TTTGACTTTCAACAT RPD_2770 3088215 - 3087832 - | hypothetical protein RPD_2771 3088644 - 3089546 + | hypothetical protein TERM 2455 3089572 - 3089601 + F 74 -12.7 -3.281 | opp_overlap 3089558, overlap 3089570 3089573 ACGCACTTCGCACTC CAGCCGTCGGCCG CAGC CGGCCGGCGGCGC TATTGTGCATTGCGA TERM 2456 3089573 - 3089600 + F 80 -16.2 -2.56539 | opp_overlap 3089558, overlap 3089572 3089570 CGCACTTCGCACTCC AGCCGTCGGCCG CAGC CGGCCGGCGGCG CTATTGTGCATTGCG TERM 2457 3090051 - 3090063 + G 70 -10.5 -3.62591 | GCTTTCGCTCATTCG CGCCC TTC GGGCG TTTCGGGATTATCAG RPD_2772 3090031 - 3090183 + | hypothetical protein TERM 2458 3090209 - 3090234 + F 77 -15.5 -2.62396 | opp_overlap 3090212, overlap 3090212 CGACCTGTTCACGGA TAACGCCCGCA TCAT TGCGGGCGTTG TCGTATCCGGACCTC TERM 2459 3090231 - 3090212 - f 82 -15 -3.35679 | opp_overlap 3090209 3090212 CCTGTTCACGGATAA CGCCCGCA TCAT TGCGGGCG TTGTCGTATCCGGAC TERM 2460 3090212 - 3090231 + F 83 -15 -3.46602 | opp_overlap 3090212, overlap 3090209 CCTGTTCACGGATAA CGCCCGCA TCAT TGCGGGCG TTGTCGTATCCGGAC TERM 2461 3091701 - 3091683 - g 78 -13.8 -3.61398 | GTCGGTCGCCAAGAA GCAGGCGC TGA GCGCCCGC GCACTGGCCGATCTC RPD_2773 3090328 - 3091761 + | tRNA (uracil-5-)-methyltransferase Gid RPD_2774 3092732 - 3091866 - | phytoene synthase TERM 2462 3092100 - 3092157 + g 77 -11.1 -3.78934 | gap 1, opp_overlap 3092138 GATCAGCTCGTTGAG CGCCAGCCGCAGAGCCGGCGTCTCGCGC CCG GCAT-AGACGTCGGCCTCGCCGCTGCCG TTCTTCTCCAGAAGC RPD_2775 3093112 - 3092729 - | hypothetical protein TERM 2463 3093092 - 3093044 - G 74 -10.5 -3.81488 | gap 3, opp_overlap 3093044 3093043 CTCGCCGAAATAGAA CCCGC-CTTTGC-CGTAC-GCCTC GACC GAAGCCGTACGCGGAAAGTGCGGG ATTTCGGAGCGTTCC secF 3094225 - 3093116 - | preprotein translocase subunit SecF secD 3095852 - 3094251 - | preprotein translocase subunit SecD RPD_2778 3096333 - 3095893 - | preprotein translocase, YajC subunit TERM 2464 3096373 - 3096355 - H 100 -5.8 -5.40072 | overlap 3096356 TCCCCGTGAAAAAAA GCGAGCCG GCG CGGCGCGG GGGCGACGTCCGGGG TERM 2465 3096372 - 3096356 - H 74 -9.3 -3.83561 | overlap 3096355 CCCCGTGAAAAAAAG CGAGCCG GCG CGGCGCG GGGGCGACGTCCGGG TERM 2466 3096600 - 3096580 - g 81 -3.8 -5.03314 | overlap 3096581 3096583 3096584 CCCACGGCGAAAAAA GCAGCCGC CCGTC GCCGCAGC CCCGCGGCCAAGACG RPD_2779 3096523 - 3097500 + | hypothetical protein RPD_2780 3097589 - 3099301 + | hypothetical protein TERM 2467 3099435 - 3099456 + T 100 -17.3 -4.00038 | opp_overlap 3099435 GAGCTTCAAAAAAAA TGCCCGGCC TTTC GGCCGGGCA TTTGTCGTCGTCGTC TERM 2468 3099456 - 3099435 - T 100 -17.3 -5.76949 | opp_overlap 3099435 GAGCTTCAAAAAAAA TGCCCGGCC TTTC GGCCGGGCA TTTGTCGTCGTCGTC RPD_2781 3100931 - 3099495 - | peptidase M23B TERM 2469 3100901 - 3100872 - G 71 -12.2 -3.2794 | gap 1 TCCGACCGATATCAA CGTC-AGCACCGC CATCT GCGGCGCTCGACG CGAGCAAAGCAACTC RPD_2782 3101684 - 3101031 - | protein-L-isoaspartate O-methyltransferase RPD_2783 3101898 - 3102269 + | response regulator receiver surE 3103178 - 3102411 - | stationary phase survival protein SurE RPD_2785 3103399 - 3103677 + | hypothetical protein RPD_2786 3104323 - 3103739 - | Allergen V5/Tpx-1 related RPD_2787 3105624 - 3104320 - | seryl-tRNA synthetase TERM 2470 3105806 - 3105787 - R 74 -15 -2.52464 | CTCCGCGGTAATGGA TGCCCCGC ATCC GCGGGGCA TGACGACCGAAGATA RPD_2788 3106630 - 3105827 - | Sec-independent protein translocase TatC TERM 2471 3106565 - 3106517 - G 70 -8.8 -3.9461 | gap 1, opp_overlap 3106529, overlap 3106523 CTTGGCGAAGAAGAA GCAGAAGATGAAGGCGATGC-CG AAGC CGAGCAGCGCCTTGATCAGCCGC GAGCGCAGCTCGATC TERM 2472 3106559 - 3106523 - G 70 -10.2 -3.64882 | gap 1, opp_overlap 3106529, overlap 3106517 GAAGAAGAAGCAGAA GATGAAGGCGATGC-CG AAGC CGAGCAGCGCCTTGATC AGCCGCGAGCGCAGC RPD_2789 3107229 - 3106627 - | twin-arginine translocation protein TatB TERM 2473 3107431 - 3107489 + r 89 -16.2 -3.4252 | gap 4 GGCGAGAGCGACGTC CGCGTCAGACCGCT-TTGCTGCCGACGTCG GTG CGG-GTCGGC-GCAGCGGCGGTC-GGCGCG TTGTGGTCGATCGAC tatA 3107674 - 3107435 - | twin argininte translocase protein A RPD_2791 3108994 - 3107825 - | chromosome segregation and condensation protein ScpB RPD_2792 3109849 - 3109016 - | chromosome segregation and condensation protein ScpA TERM 2474 3109105 - 3109092 - G 72 -4.5 -4.48449 | gap 1, overlap 3109093 3109094 TTACGAAAATACAAA GGCGCC AGA GGC-CC GGCCTGATGCAGTTC RPD_2793 3110871 - 3109846 - | Beta-N-acetylhexosaminidase RPD_2794 3112526 - 3110919 - | sporulation related TERM 2475 3112621 - 3112595 - R 76 -5.9 -4.57073 | gap 1, overlap 3112582 GACTGCTCTCAAAAA GCCGCTCCAGAT CCCC ATCTG-ACCGGC TGTCCCCCTACCGCA RPD_2795 3114422 - 3112629 - | arginyl-tRNA synthetase RPD_2796 3115685 - 3114471 - | deoxyguanosinetriphosphate triphosphohydrolase RPD_2797 3115794 - 3116126 + | HesB/YadR/YfhF TERM 2476 3116142 - 3116182 + F 70 -11.9 -3.21099 | gap 1, overlap 3116158 CACAGTGAGTTGGAC GGCGATTTGAACGCCGCG ACGCGG CGCGGCG-TCAGACTGCC TTGATGGTCCGAAGG RPD_2798 3116405 - 3117424 + | hypothetical protein RPD_2799 3117426 - 3118487 + | hypothetical protein TERM 2477 3118537 - 3118509 - T 76 -8.8 -4.1347 | gap 1, overlap 3118505 CGCGAACGAGACAAA GCCGGGAGC-CTT GATC AGGTGCCCCCGGC GATGGTCTATGGCGG RPD_2800 3119559 - 3118597 - | hypothetical protein TERM 2478 3119712 - 3119691 - R 73 -10.9 -3.60475 | gap 1, overlap 3119674 3119694 AAGTTGCATCCGAAA CCACTTGCGC CAT GCGCAAG-GG CCGGGTCGGTCAGGG RPD_2801 3120103 - 3119744 - | transcriptional regulators RPD_2802 3123476 - 3120348 - | acriflavin resistance protein RPD_2803 3124611 - 3123481 - | secretion protein HlyD RPD_2804 3124760 - 3125551 + | exodeoxyribonuclease III TERM 2479 3125603 - 3125647 + T 82 -10.7 -4.08958 | opp_overlap 3125611, overlap 3125601 3125604 CGACAGCGACCGCTC TCTAGAGAGGGATGACTTATC TTC GAATTGTCATCCCGCTCTAGG TTATTGTTTGAGCAT RPD_2805 3126531 - 3125710 - | Sel1 RPD_2806 3128242 - 3126518 - | dihydroxy-acid dehydratase RPD_2807 3129908 - 3128487 - | dihydrolipoamide dehydrogenase RPD_2808 3130336 - 3129911 - | hypothetical protein RPD_2809 3131819 - 3130398 - | branched-chain alpha-keto acid dehydrogenase subunit E2 RPD_2810 3132127 - 3131831 - | hypothetical protein RPD_2811 3133541 - 3132132 - | pyruvate dehydrogenase subunit beta TERM 2480 3133190 - 3133246 + g 87 -17.1 -3.4811 | overlap 3133190 3133214 CCTGCGCGGGCACGG GTGCGGACTTCGCCTCGCCGGCTTCCG GCG CGGCAGCCGGCGGCGCCGATTGCGCGC TCTTGTTCTGCGCCG RPD_2812 3134651 - 3133617 - | pyruvate dehydrogenase (lipoamide) TERM 2481 3133896 - 3133934 + g 77 -13.1 -3.53012 | gap 1, overlap 3133884 GATGTAGGGTCCATT GCCGGC-GCGGCAATGCG CCAC CGCCTTGTCGCCGGCGGC TTTCACCGCACGGAC RPD_2813 3135120 - 3134803 - | septum formation initiator TERM 2482 3135069 - 3135047 - G 84 -13.4 -3.92542 | opp_overlap 3135048, overlap 3135048 TTGATGCCGAAATAA CCGATCGCCG CCG CGGCGATCGC GTAGAGCGCGATTCC TERM 2483 3135068 - 3135048 - G 82 -16.9 -2.95204 | opp_overlap 3135048, overlap 3135047 TGATGCCGAAATAAC CGATCGCCG CCG CGGCGATCG CGTAGAGCGCGATTC TERM 2484 3135237 - 3135247 + H 73 -6.8 -4.37534 | overlap 3135231 CTTGACCCCGGCGAG TGGC CCC GCCA TTTTCATCTCCGTTT RPD_2814 3135347 - 3135961 + | lysine exporter protein LysE/YggA TERM 2485 3135972 - 3135994 + T 76 -6.2 -4.58395 | overlap 3135974 GCTGACAGCATTGAC TACCTGCTCG GAT CGATCAGGAA TTTTTCGCCGGTCGC RPD_2815 3137104 - 3135971 - | alcohol dehydrogenase GroES-like protein RPD_2816 3138499 - 3137216 - | phosphopyruvate hydratase TERM 2486 3137890 - 3137840 - G 76 -14.7 -3.21099 | gap 1, opp_overlap 3137868 3137868 3137878 3137879 CGCGGCCATGACGAA GTCGAGCGCGGCGTC-CGCCGA CGGCAGGT TCGGCGCGAAGCCGCCCTCGTC GCCGACATTGGTGTT RPD_2817 3138629 - 3139105 + | 7-cyano-7-deazaguanine reductase RPD_2818 3140782 - 3139172 - | hypothetical protein TERM 2487 3139360 - 3139311 - G 74 -10.1 -3.827 | gap 3 AAGAACGAACCGAAA CCGCCGTCCCAATTGTCGTCG-CG GTCGG CGACGACGACG-TTGGG-CGTCGG CTTGCGGGTGATGAA TERM 2488 3139787 - 3139814 + g 73 -11.2 -3.65046 | opp_overlap 3139765 CTGCGCGAGCTTCGC GTCCAGCGCCGC CTTG GCGGTGTTGGCC TTCTTGGCCTCGGCC TERM 2489 3140506 - 3140458 - G 73 -12.1 -3.39018 | overlap 3140456 CGAGGATCGCAAACA CGCCGGCCGGCGTCTCCCGCCCC GAA GTGCCGGTCGACACCGGCGCGCG CAGGATCCAGCCATC RPD_2819 3142166 - 3140940 - | major facilitator transporter TERM 2490 3141834 - 3141809 - G 78 -6 -4.62069 | overlap 3141810 GCGCCACCGGAAAAA CCCCGCCCGC CCCGAT GCCGGCGAGA ATCCGGCACAGAAAC TERM 2491 3141960 - 3141941 - G 70 -13.6 -3.01712 | overlap 3141943 GCGCCTTGCCGAACA GATCGGCG AGCG CGCCGATC GCCGGCTGCACCATG RPD_2820 3143029 - 3142166 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2492 3142827 - 3142777 - G 74 -14.5 -3.02144 | gap 1, opp_overlap 3142802 GGATCTCGGCGAAGA TCGCCAGCGCCGCG-TCGAGCCCG ATGC CGCGCGCGCTCGCGGCGCTGGTGC GGTTGGCCTTGTCGA RPD_2821 3143895 - 3143026 - | hypothetical protein TERM 2493 3143106 - 3143055 - G 75 -15.8 -2.73875 | gap 1, opp_overlap 3143087, overlap 3143052 CTTGTTCGAAGATCA GCGTCGCGCCGCACAGATCCGGC GCGATCA GCCGG-TCGATGTGGCGCGTCGC CACGATCCCGTTCTG TERM 2494 3143190 - 3143215 + g 76 -14.7 -3.13403 | overlap 3143189 CGAACCGCGCGCCCT CGGCGTCGGTC GCAA GGCTGACGCCG TATTGGTCGCGGAAC TERM 2495 3143711 - 3143689 - G 73 -6.3 -4.43477 | gap 2, opp_overlap 3143690 3143690 3143691, overlap 3143690 3143691 CGCACCGAATGAAAA TGCGCGCGCGC GAT GCG-GCGCG-A TCTTCTCCGGTTCGG TERM 2496 3143976 - 3143945 - R 70 -10 -3.55563 | gap 1 ACTTCATCGCCGAAA CCG-CGGTCGGCGCC CGC AGCGCCGGCAGACGG CCGGGCACGCAACGA TERM 2497 3144122 - 3144088 - R 77 -12.7 -3.6715 | overlap 3144092 3144110 GCAGGCAAGGTCAAA GCGATGGGCGCGGCG GACAG CACCGCGCCCGCTGC ATGACGCGCGGACCG RPD_2822 3145023 - 3144166 - | hypothetical protein RPD_2823 3145227 - 3145568 + | PAAR RPD_2824 3147206 - 3145575 - | CTP synthetase secG 3147759 - 3147373 - | preprotein translocase subunit SecG RPD_2826 3148708 - 3147935 - | triosephosphate isomerase RPD_2827 3149001 - 3150902 + | PpiC-type peptidyl-prolyl cis-trans isomerase trpD 3150942 - 3151958 + | anthranilate phosphoribosyltransferase TERM 2498 3152060 - 3152089 + G 84 -17.1 -3.14881 | gap 1 GCAGCGTTGCAGGCC GCCGCGCGTGCAGC GCC GCCGC-CGCGCGGC TTCGTCAGCGCATTG RPD_2829 3151970 - 3152767 + | indole-3-glycerol-phosphate synthase moaC 3152775 - 3153287 + | molybdenum cofactor biosynthesis protein C TERM 2499 3155882 - 3155844 - g 71 -12.2 -3.21912 | CCTCGAACTGATCAA GCCGCTATGGCGCGGCCG GAT CGGCAGCGCCGCATCGCC GCGCCCCGTCCAAGT RPD_2831 3153325 - 3155913 + | ATPase, E1-E2 type RPD_2832 3156549 - 3156076 - | hypothetical protein TERM 2500 3156496 - 3156519 + g 82 -17.4 -2.83112 | CGTGACCGCGTTTTG CGGTCCCGCG ATCG CGCGGGGCCG TATCCTGAATTCAAT TERM 2501 3156795 - 3156764 - H 83 -14.5 -3.5361 | gap 1, overlap 3156727 3156785 CAATCAGCGACAGAA CGGCCCGGATGCTG GAACG CA-CACCCGGGCCG ACTGCCCGGCTGCGC RPD_2833 3156919 - 3157167 + | type IV pilus assembly PilZ TERM 2502 3157228 - 3157275 + T 70 -7.9 -4.09685 | gap 3, opp_overlap 3157217 3157214 3157238, overlap 3157215 ATTATCGCGTTGTCG CGCGAAGTCACTT-CGTTGCTGAT CCA ATCAGCACCGGAAGAG-C-TCGCG TTTTCAGCGCTGCAG RPD_2834 3158139 - 3157279 - | OmpA/MotB TERM 2503 3158759 - 3158800 + G 71 -9.5 -3.78778 | gap 1, overlap 3158797 GCGCACATCGCGCAT TTCTCGGAGC-GCTACAGCG GCT TGCTGAAGCCGTTTCGGGAA TTGTTCCTGTCGTCG RPD_2835 3158315 - 3159010 + | HAD family hydrolase TERM 2504 3159507 - 3159549 + G 78 -15.5 -3.13403 | overlap 3159506 3159540 GCCGAACGGCGAAGC CG-GACGCGCGGCGGCAGCCG ATC CGGC-GTAGCCGCGCGGCGCG TGTTACTGCGCCGGC RPD_2836 3159043 - 3159537 + | hypothetical protein RPD_2837 3159899 - 3159552 - | hypothetical protein RPD_2838 3160137 - 3161348 + | MoeA-likedomain-containing protein RPD_2839 3161524 - 3162231 + | LexA repressor RPD_2840 3164559 - 3162265 - | ComEC/Rec2-related protein TERM 2505 3163139 - 3163122 - G 73 -11.3 -3.64599 | CCAGCAGATTGGAAA TCACGCC ATAG GGCGTGA CGCGGTGGAAGTGAA TERM 2506 3163549 - 3163504 - G 74 -10.3 -3.7732 | gap 1, opp_overlap 3163507 3163511, overlap 3163507 3163510 3163511 GCCGGACAGCAACAA GTAGAACGCCGCGGCGGCGAGC GCG GC-CGCGGCCGCGACTTTCTTG ATCGGAAAAATCACC TERM 2507 3163546 - 3163507 - G 79 -16.4 -2.97707 | gap 1, opp_overlap 3163507 3163511, overlap 3163504 3163510 3163511 GGACAGCAACAAGTA GAACGCCGCGGCGGCGAGC GCG GC-CGCGGCCGCGACTTTC TTGATCGGAAAAATC TERM 2508 3163507 - 3163546 + g 73 -14.2 -3.14344 | gap 1, opp_overlap 3163507 3163504 3163510 3163511, overlap 3163511 GGACAGCAACAAGTA GAACGCCGCGGCGGCGAGC GCG GC-CGCGGCCGCGACTTTC TTGATCGGAAAAATC TERM 2509 3163537 - 3163510 - G 78 -14 -3.6216 | opp_overlap 3163507 3163511, overlap 3163507 3163504 3163511 CAGCAACAAGTAGAA CGCCGCGGCGGC GAGC GCGGCCGCGGCC GCGACTTTCTTGATC TERM 2510 3163511 - 3163542 + g 91 -13.6 -4.24342 | gap 1, opp_overlap 3163510 3163507 3163504 3163511, overlap 3163507 AGCAACAAGTAGAAC GCCGCGGCGGCGAGC GCG GC-CGCGGCCGCGAC TTTCTTGATCGGAAA TERM 2511 3163536 - 3163511 - G 80 -17.5 -2.76573 | opp_overlap 3163511 3163507, overlap 3163510 3163507 3163504 AGCAACAAGTAGAAC GCCGCGGCGGC GAGC GCGGCCGCGGC CGCGACTTTCTTGAT TERM 2512 3163593 - 3163560 - G 71 -2.9 -4.62069 | overlap 3163561 TCTTGATCGGAAAAA TCACCGTCAGCGCCG GGAT CAGCGCCAGCAGCGC GCGGACCGCGAAGAA TERM 2513 3164608 - 3164652 + r 77 -13.5 -3.33815 | opp_overlap 3164621, overlap 3164609 3164612 GTGGCGCAGATCGGG ATCGCCGGCAACAGCCGACGC GTA GCGTCAGCTCTTGCCGCTGAC TTCCTTGGCGAAGGT TERM 2514 3164609 - 3164651 + r 83 -17 -2.60075 | opp_overlap 3164621, overlap 3164608 3164612 TGGCGCAGATCGGGA TCGCCGGCAACAGCCGACGC GTA GCGTCAGCTCTTGCCGCTGA CTTCCTTGGCGAAGG TERM 2515 3164612 - 3164648 + r 77 -15.1 -2.60244 | opp_overlap 3164621, overlap 3164609 3164608 CGCAGATCGGGATCG CCGGCAACAGCCGACGC GTA GCGTCAGCTCTTGCCGC TGACTTCCTTGGCGA RPD_2841 3166320 - 3164635 - | glutaminyl-tRNA synthetase gltX 3166573 - 3167994 + | glutamyl-tRNA synthetase gltA 3168145 - 3169449 + | type II citrate synthase TERM 2516 3169473 - 3169507 + T 100 -21.6 -2.73441 | opp_overlap 3169478, overlap 3169478 GACCGTAGCTCGACA AAAAACGGCGAACCGC CCC GCGGTTCGCCGTTTTG CTTTGGAGAGTCCTG TERM 2517 3169502 - 3169478 - T 100 -21.5 -5.252 | opp_overlap 3169478 3169473 TAGCTCGACAAAAAA CGGCGAACCGC CCC GCGGTTCGCCG TTTTGCTTTGGAGAG TERM 2518 3169478 - 3169502 + T 100 -21.5 -4.54727 | opp_overlap 3169478, overlap 3169473 TAGCTCGACAAAAAA CGGCGAACCGC CCC GCGGTTCGCCG TTTTGCTTTGGAGAG RPD_2844 3170742 - 3169561 - | lipid-A-disaccharide synthase TERM 2519 3169594 - 3169613 + g 70 -10.6 -3.53444 | opp_overlap 3169592 CGCCAGCACGACATC CGCCGCGC AGGC GCTCGGCG TTTGCGCGCCGGTCG TERM 2520 3169916 - 3169939 + g 74 -2.3 -4.84359 | GATTTTGCGAACGCC GCCCGCG CGATCCGGAA CGCGGCC TTTTTCTCGGCATCG RPD_2845 3171596 - 3170739 - | hypothetical protein TERM 2521 3170770 - 3170783 + g 71 -9.5 -3.82665 | GTGACGAATAGGCCA GCCGC GTCT GCGGC TTTGATCGTCTCCTG RPD_2846 3172454 - 3171615 - | UDP-N-acetylglucosamine acyltransferase TERM 2522 3172166 - 3172122 - G 70 -9.8 -3.71848 | gap 1, opp_overlap 3172121 3172156 3172158 3172161 CGCCGCCATGAAGAA GCCGCGGTCGCCGAC-CCGGG TCAC CCCGCCGCCGCCGACCGTGCC GGTATTCATCGTCAC RPD_2847 3172920 - 3172465 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ lpxD 3173999 - 3172920 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RPD_2849 3176562 - 3174028 - | surface antigen (D15) TERM 2523 3176670 - 3176680 + r 73 -6.8 -4.27062 | GGGGCAAACGTCCTT TCGC ACT GCGA TTTCATTTTCATTCC RPD_2850 3177882 - 3176731 - | peptidase M50, putative membrane-associated zinc metallopeptidase RPD_2851 3179150 - 3177927 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase RPD_2852 3180003 - 3179155 - | phosphatidate cytidylyltransferase TERM 2524 3179440 - 3179470 + g 71 -3.1 -4.59773 | gap 1, overlap 3179437 3179436 CACCAGCAGGCTCAG GACC-AGCCCGCCG ATCG CGCCGGCCCAGGTC TTTTTCGGGCTCACA RPD_2853 3180767 - 3180009 - | undecaprenyl diphosphate synthase RPD_2854 3181588 - 3181025 - | ribosome recycling factor RPD_2855 3182357 - 3181641 - | uridylate kinase tsf 3183356 - 3182430 - | elongation factor Ts TERM 2525 3183497 - 3183539 + r 80 -15 -3.15544 | opp_overlap 3183505 AATGCTGTCGATCAA TG-GACGAAGCTGCGGCCGG ACGGA CCGGCCGCAGCGTC-TCGCA TTACTCCGCCTCGGC TERM 2526 3183531 - 3183505 - R 95 -20.9 -3.22884 | opp_overlap 3183497 CGATCAATGGACGAA GCTGCGGCCGG ACGGA CCGGCCGCAGC GTCTCGCATTACTCC rpsB 3184535 - 3183540 - | 30S ribosomal protein S2 dnaE 3188198 - 3184743 - | DNA polymerase III subunit alpha RPD_2859 3189771 - 3188692 - | hypothetical protein TERM 2527 3189498 - 3189471 - G 76 -8.4 -4.25848 | gap 1, overlap 3189473 3189474 AACGCCGGATCAAAA CACTCTCGACGGC ATA GCCGTCGTGAA-G CCCGAACAGCATCTT TERM 2528 3189497 - 3189473 - G 77 -12.1 -3.73042 | overlap 3189471 3189474 CGCCGGATCAAAACA CTCTCGACGGC ATA GCCGTCGTGAA GCCCGAACAGCATCT RPD_2860 3190499 - 3189846 - | regulatory protein, TetR RPD_2861 3190627 - 3190941 + | hypothetical protein RPD_2862 3190938 - 3191216 + | hypothetical protein RPD_2863 3191969 - 3191271 - | ABC transporter related TERM 2529 3191441 - 3191499 + g 73 -13.8 -3.13403 | gap 3, opp_overlap 3191459, overlap 3191463 CGAGATTGCCGGTCG GCTCGTCGGCGAACAGAACGCGCGG-CGC ATTG GCGACCGCGCGCGC-GATCGC-GACGCGC TGTTGCTCGCCGCCG TERM 2530 3191483 - 3191459 - G 83 -15 -3.65812 | gap 1, opp_overlap 3191441 3191463 CGTCGGCGAACAGAA CGCGCGG-CGC ATTG GCGACCGCGCG CGCGATCGCGACGCG RPD_2864 3193248 - 3191980 - | LolC/E family lipoprotein releasing system, transmembrane protein RPD_2865 3194636 - 3193317 - | prolyl-tRNA synthetase TERM 2531 3194879 - 3194852 - R 95 -20.6 -3.14211 | opp_overlap 3194845 AGGTCCGCCCATCAA CGCCGCGACCGC CCAA GCGGTCGCGACG CTTGCCCATTCCGTT RPD_2866 3195433 - 3194912 - | hypothetical protein TERM 2532 3195519 - 3195469 - R 76 -11.1 -3.72576 | TTGCTGGGGATGAAA CGGTCCGACGACAGCG-CGGATGCA CGA CGCATCCGTCCCCGCC-CCGGTCCG ATGAACTCTTCAGAA RPD_2867 3195990 - 3195577 - | hypothetical protein TERM 2533 3196309 - 3196326 + r 100 -12.7 -5.26119 | TCGACACAGTTTTCA GCAGGGC ACCC GCCCTGC TTTTCTTTTTCCAGC RPD_2868 3196788 - 3196504 - | hypothetical protein RPD_2869 3197193 - 3196789 - | glyoxalase/bleomycin resistance protein/dioxygenase RPD_2870 3199000 - 3197330 - | beta-lactamase-like TERM 2534 3198415 - 3198452 + g 72 -6.7 -4.2828 | opp_overlap 3198408 TGGAATCACCGATCA GCGCCAGCACGCCCTCG TCGC CGAGTTCGCGCAGCCGC TTTTCGTCGGTGGGC TERM 2535 3198644 - 3198698 + g 84 -12.9 -3.89822 | opp_overlap 3198685, overlap 3198645 CTCGGTGATCGGGAT CTTCAGCGTGGTGC-GCTCGGCCGCGA GCT TGGCGGC-GAACAGCGCCGCGCTGAAC TTTGTCGCATAGATC TERM 2536 3198645 - 3198697 + g 79 -16.4 -2.93572 | opp_overlap 3198685, overlap 3198644 TCGGTGATCGGGATC TTCAGCGTGGTGC-GCTCGGCCGCGA GCT TGGCGGC-GAACAGCGCCGCGCTGAA CTTTGTCGCATAGAT RPD_2871 3199809 - 3199000 - | biotin--acetyl-CoA-carboxylase ligase TERM 2537 3199780 - 3199756 - G 77 -15.7 -3.06796 | opp_overlap 3199756 GCCGATCGCATCGAA GGCGGCGAGAC GAT ATCCCGCCGCC TGTGCTCTCGGCCCG RPD_2872 3201246 - 3199810 - | NADH dehydrogenase subunit N RPD_2873 3202783 - 3201266 - | NADH dehydrogenase subunit M RPD_2874 3204876 - 3202783 - | NADH dehydrogenase subunit L RPD_2875 3205253 - 3204942 - | NADH dehydrogenase subunit K RPD_2876 3205888 - 3205250 - | NADH dehydrogenase subunit J RPD_2877 3206386 - 3205898 - | NADH dehydrogenase subunit I RPD_2878 3207419 - 3206394 - | NADH dehydrogenase subunit H RPD_2879 3209504 - 3207429 - | NADH dehydrogenase subunit G TERM 2538 3207553 - 3207610 + g 87 -18.9 -2.78384 | opp_overlap 3207531 3207530 TTGAACGGCGCCTTG TCGACGCTGCCGCCGGCGGCGGCGAGC GTGC GCACGGCGCCGGCGTCGCCGGCCTCGA TCTGGTCGACCCGCA TERM 2539 3208464 - 3208494 + g 75 -9.6 -4.08216 | opp_overlap 3208455, overlap 3208476 ATCGAACGCCGCGAC GCTCGGGGCTGCGA GGT TCGAAGAGCCGAGC TTTTCGAGCAACTGC TERM 2540 3208535 - 3208560 + g 71 -14.7 -2.63073 | opp_overlap 3208523, overlap 3208534 3208536 3208542 ACATCTCCTCGACCG CGGCGAGATCG CCGG CGATCGCGCCG ATCTTCTTGCCGCCG TERM 2541 3208536 - 3208593 + g 84 -17 -3.14132 | gap 1, opp_overlap 3208523, overlap 3208535 3208534 3208542 CATCTCCTCGACCGC GGCGAGA-TCGCCGGCGATCGCGCCGA TCTTC TTGCCGCCGACGCCGGCGAGTTTCGCC TTGATGGCGCCGAAC TERM 2542 3208542 - 3208586 + g 70 -9.8 -3.67976 | opp_overlap 3208523, overlap 3208535 3208534 3208536 CTCGACCGCGGCGAG ATCGCCGGCGATCGCGCCGA TCTTC TTGCCGCCGACGCCGGCGAG TTTCGCCTTGATGGC RPD_2880 3210835 - 3209510 - | NADH dehydrogenase I subunit F RPD_2881 3211018 - 3210854 - | hypothetical protein TERM 2543 3210996 - 3210967 - G 84 -5.5 -4.91109 | overlap 3210971 GCTGCAGTAGAAAAA TGAAGCTCGCGGC GATG ACCGCGTGCATCG CAATATAGATCGGCT TERM 2544 3210992 - 3210971 - G 73 -9.3 -3.89607 | overlap 3210967 CAGTAGAAAAATGAA GCTCGCGGC GATG ACCGCGTGC ATCGCAATATAGATC TERM 2545 3211044 - 3211078 + r 76 -8.4 -4.1899 | overlap 3211047 3211048 CTCTCCGCGCGGCGC GAGGCCGCCCTGCTCG GCT CGGTCATGGCGGGTTC TTTTCAGTCGCGTCG RPD_2882 3211815 - 3211066 - | NADH dehydrogenase subunit E RPD_2883 3212789 - 3211818 - | methyltransferase FkbM RPD_2884 3214036 - 3212786 - | NADH dehydrogenase subunit D RPD_2885 3214705 - 3214091 - | NADH dehydrogenase subunit C RPD_2886 3215318 - 3214719 - | NADH dehydrogenase subunit B RPD_2887 3215695 - 3215330 - | NADH dehydrogenase subunit A RPD_2888 3216032 - 3216226 + | hypothetical protein TERM 2546 3216275 - 3216292 + F 100 -9.8 -4.90266 | CAGAATGTCGAGATC GGCCGC CTTCGA GCGGCC TTTTTGATTCATCCA TERM 2547 3216338 - 3216354 + F 77 -13.7 -3.29144 | opp_overlap 3216328 3216337 3216336 GAAGAGCGACGAAGC GTCGCGG CTG CCGCGAC TTCTCCACAACGTGC RPD_2889 3216892 - 3217203 + | histone-like DNA-binding protein TERM 2548 3217224 - 3217266 + F 100 -21.2 -3.87815 | overlap 3217225 CCCTTCGGACGATCC ACGCGATCCCGGGAGGCCGC CTC GCGGCTGCCCGGGATGGCGA TTTGTAACGATCCCG TERM 2549 3217225 - 3217265 + F 100 -24.7 -2.92475 | overlap 3217224 CCTTCGGACGATCCA CGCGATCCCGGGAGGCCGC CTC GCGGCTGCCCGGGATGGCG ATTTGTAACGATCCC RPD_2890 3217294 - 3218586 + | peptidase T RPD_2891 3219087 - 3218803 - | hypothetical protein TERM 2550 3219320 - 3219343 + r 78 -15.2 -2.71763 | opp_overlap 3219320, overlap 3219317 3219315 3219315 TCTCCGGAAACGAAA GCGGCGCCCC CTGA GGAGCGCCGC TGATGTCGTTATGAG TERM 2551 3219343 - 3219320 - R 100 -17.4 -4.05788 | opp_overlap 3219317 3219315 3219315 3219320 TCTCCGGAAACGAAA GCGGCGCCCC CTGA GGAGCGCCGC TGATGTCGTTATGAG RPD_2892 3221808 - 3219370 - | ATP-dependent protease La TERM 2552 3219402 - 3219443 + g 79 -16.5 -2.9155 | overlap 3219413 3219436 CGCCGGCGGCTTCGT CGCCCTCCTGGCTCTCCGG CTTG CCGGGGAGTTTGGAGGGGG TCTCCTCTTCCCACA TERM 2553 3219413 - 3219432 + g 72 -11.4 -3.54129 | overlap 3219402 TCGTCGCCCTCCTGG CTCTCCGG CTTG CCGGGGAG TTTGGAGGGGGTCTC TERM 2554 3222061 - 3222090 + r 100 -21.5 -3.02043 | opp_overlap 3222061 3222062 GAAGCGCAGACGAAA TCGGGCTGCCGAG AGGT CTCGGCAGCCCGG TCTTGAAAACCCATT TERM 2555 3222090 - 3222061 - R 100 -19.3 -3.84712 | opp_overlap 3222061, overlap 3222062 GAAGCGCAGACGAAA TCGGGCTGCCGAG AGGT CTCGGCAGCCCGG TCTTGAAAACCCATT TERM 2556 3222089 - 3222062 - R 100 -22.8 -2.90345 | opp_overlap 3222061, overlap 3222061 AAGCGCAGACGAAAT CGGGCTGCCGAG AGGT CTCGGCAGCCCG GTCTTGAAAACCCAT clpX 3223411 - 3222137 - | ATP-dependent protease ATP-binding subunit TERM 2557 3222593 - 3222647 + g 75 -9.1 -4.07568 | gap 1, overlap 3222596 GCGATCTTCAGGCGC GAGCACCTGCGCCGCGAAGCCGATCG AGGT CGAACGGCCGCGCGCCG-AGATGATC TTTTCAAGGCCCGCG RPD_2894 3224442 - 3223798 - | endopeptidase Clp TERM 2558 3224726 - 3224698 - R 100 -22.5 -3.62096 | CCTCACGATGCGAAA CGGCCGCCGTGAC GGG GTCACAGCGGCCG ATCAAAGCGATCAAA tig 3226125 - 3224764 - | trigger factor TERM 2559 3224878 - 3224905 + g 73 -11.2 -3.7282 | gap 1, overlap 3224896 CTTGTCTTCGTAGAT CGGGGCGCGGAGC TGG GC-CAGCGCCTCG TTGTTGCTGCGGTAG TERM 2560 3226097 - 3226109 + g 73 -9.1 -3.91911 | AATTCGCGCTTCAAC CCGTC GGC GACGG TTTCCTTGACCTGCA TERM 2561 3227231 - 3227241 + G 81 -8.2 -4.56597 | CCCTCGACAGCCAGC CGGC GGA GCCG TTTTTGGCGCGCGGC RPD_2896 3226510 - 3227838 + | multicopper oxidase, type 2 TERM 2562 3229875 - 3229890 + G 72 -11.8 -3.53091 | TCCGCGCCATCGTCA CCGCCG CGAC CGGCGG TTTCGCCGACGAACT RPD_2897 3227885 - 3229945 + | para-aminobenzoate synthase, component I TERM 2563 3230310 - 3230348 + G 79 -16.7 -2.84634 | gap 1, overlap 3230329 CCTGCTCGGCAGCAT CGCGCCGATCGCCGCCGT GCCG ATGCCGGCGG-CGGCGCG TCTGGTGATCTGCCG RPD_2898 3229957 - 3230769 + | aminotransferase, class IV RPD_2899 3232330 - 3230831 - | hypothetical protein RPD_2900 3232735 - 3233073 + | nitrogen regulatory protein P-II TERM 2564 3233129 - 3233114 - f 78 -11.8 -3.78775 | GGTTGCATCACCAAA CGGCCG ATCG CGGCCG CGAACTCACGACGAC RPD_2901 3233165 - 3234574 + | glutamine synthetase, type I TERM 2565 3234622 - 3234643 + F 100 -15.1 -4.86621 | opp_overlap 3234607 TTCGACGACGGATCA GGCGCCTCG ACAA CGGGGCGCC TTTTTCGTTGCCGCT TERM 2566 3234785 - 3234761 - g 79 -11.5 -3.8186 | CATTCGAATGAATAA CATGCCTCGAA AGG CTCGAGACATG CGCGACGAACAAGCA RPD_2902 3234753 - 3235514 + | regulatory protein, TetR RPD_2903 3235532 - 3236140 + | hypothetical protein TERM 2567 3236216 - 3236190 - T 91 -16.6 -3.57406 | opp_overlap 3236191 3236195, overlap 3236191 3236195 CTCGGATCATAAACA GCAAAGGCGCCG TTG CGGCGCCTTTGT CCTTCCGGACCACTG TERM 2568 3236191 - 3236215 + T 90 -20.1 -2.71011 | opp_overlap 3236190 3236191 3236195, overlap 3236195 TCGGATCATAAACAG CAAAGGCGCCG TTG CGGCGCCTTTG TCCTTCCGGACCACT TERM 2569 3236215 - 3236191 - T 90 -20.1 -2.74122 | opp_overlap 3236191 3236195, overlap 3236190 3236195 TCGGATCATAAACAG CAAAGGCGCCG TTG CGGCGCCTTTG TCCTTCCGGACCACT TERM 2570 3236211 - 3236195 - T 95 -15.1 -4.05181 | opp_overlap 3236191 3236195, overlap 3236191 3236190 ATCATAAACAGCAAA GGCGCCG TTG CGGCGCC TTTGTCCTTCCGGAC TERM 2571 3236195 - 3236211 + T 95 -15.1 -4.05446 | opp_overlap 3236195 3236191 3236190, overlap 3236191 ATCATAAACAGCAAA GGCGCCG TTG CGGCGCC TTTGTCCTTCCGGAC RPD_2904 3236897 - 3236268 - | hypothetical protein TERM 2572 3236421 - 3236379 - G 78 -15.5 -3.14132 | gap 1, opp_overlap 3236387 3236389 GCGGGTGTCGATGAA GCCGATCGCC-TCGGCGCGC GACA GCGGGCCGGTGGTGATCGGC TGCGACGCGGTGCCG RPD_2905 3238428 - 3237004 - | amidase TERM 2573 3237677 - 3237653 - G 74 -12.1 -3.57119 | GAGACATCGGTGAAA GCGATCCGCAG CTT CCCCGGATCGC GGCCGACCTCCTGCG RPD_2906 3239470 - 3238481 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding RPD_2907 3240606 - 3239506 - | ABC transporter related TERM 2574 3239935 - 3239911 - G 90 -18.6 -3.16564 | GGGCGAGCCGATGAA GCCGGCGACG AAGCG CGTCGCCGGC CGATGGTACAGTTCG RPD_2908 3241522 - 3240611 - | binding-protein-dependent transport systems inner membrane component TERM 2575 3241191 - 3241166 - G 78 -14.7 -3.31144 | CGCCGAGCCCCAGAA CCGCATCCGCG CCAG CGCGAACGCGG CAGGCACGCTGATCA RPD_2909 3242568 - 3241522 - | binding-protein-dependent transport systems inner membrane component TERM 2576 3242251 - 3242269 + g 70 -8.8 -3.9392 | GAAGTTGCCGAACCC GACGAAGC GCT GCATCGTC TTGTTTAGCGTCGAC TERM 2577 3242528 - 3242497 - G 93 -19.5 -2.71263 | gap 1, overlap 3242485 3242484 AATGGCTGGGAACGA GCCCGGAGCCGACG CGATC CG-CGGCTCCGGGC GATGACGCATTGCGC RPD_2910 3244065 - 3242593 - | twin-arginine translocation pathway signal RPD_2911 3245312 - 3244413 - | hypothetical protein TERM 2578 3245472 - 3245489 + H 77 -4 -4.93696 | opp_overlap 3245454, overlap 3245452 GGTGCAGGCTGGAAT CCGGGC CGCGCC GCCGGG TTTTTGCTGTTTGGA TERM 2579 3249032 - 3249018 - g 81 -11.4 -3.9534 | opp_overlap 3249026 ATCGACATGCACAAA GAGGGC GCC GCCCTC CGGTCGTTCATCAAT RPD_2912 3245979 - 3249749 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2580 3249792 - 3249771 - f 89 -17.3 -3.16743 | AATCCACAGATTGAA GGGCGGCGA CTAC TCGCCGCCC TTGACACATCAATAC TERM 2581 3249920 - 3249900 - g 70 -10.5 -3.63744 | overlap 3249898 TGGTGCCGTAAAAGA TCGGTCTCA AAC TAAGACCGA GACTTGGGTGAAGCG RPD_2913 3249847 - 3250011 + | hypothetical protein TERM 2582 3250940 - 3250957 + G 70 -3.5 -4.57073 | gap 1, overlap 3250942 AACTCGAACAGTCTA CT-TTCTC GGA GAGAATAG TTTTTCGACCAAGTA RPD_2914 3250131 - 3251081 + | hypothetical protein RPD_2915 3251085 - 3251675 + | hypothetical protein TERM 2583 3251734 - 3251781 + F 78 -14.2 -3.03124 | opp_overlap 3251716 3251717 3251739 3251764 3251765 3251774, overlap 3251739 CGTAGCGGCGGATTA GCGAAGCGTAATCCGCCGCT CACCACAC AACGGCGCAATACGCTTCGC TATTGCGCCCTACGC RPD_2916 3251940 - 3252188 + | hypothetical protein TERM 2584 3252425 - 3252472 + F 78 -14.8 -3.03124 | gap 1, opp_overlap 3252401 CCGTAGGGCGGACTA GCGCAGCGTAATCCGCCGCTCAC CAC GCG-GAGGCGCAATACGCTGCGC TATTGCGCCCTACGA RPD_2917 3252577 - 3253263 + | Male sterility-like RPD_2918 3254895 - 3253318 - | cobyric acid synthase RPD_2919 3255593 - 3254892 - | hypothetical protein TERM 2585 3256198 - 3256186 - H 91 -4.8 -5.37865 | TGAAGAAGGAAAAAA CGTC ATCGA GACG CATGTGATCAAGTAC TERM 2586 3256771 - 3256729 - H 90 -17.9 -3.05844 | gap 2, opp_overlap 3256731, overlap 3256732 TGCTCCATTTCAAGA TCA-CCAC-CCCGCCGCGCGT GCT ACGCGCAGCGAGCGTGGCTGA TTGAACTCCACCAAG TERM 2587 3256767 - 3256732 - H 90 -19.8 -2.75074 | gap 1, opp_overlap 3256731, overlap 3256729 TCCATTTCAAGATCA CCAC-CCCGCCGCGCGT GCT ACGCGCAGCGAGCGTGG CTGATTGAACTCCAC RPD_2921 3256772 - 3257134 + | hypothetical protein RPD_2922 3258056 - 3257169 - | periplasmic binding protein RPD_2923 3258835 - 3258053 - | ABC transporter related RPD_2924 3259842 - 3258832 - | transport system permease protein TERM 2588 3259057 - 3259036 - G 77 -10.9 -3.85817 | gap 1 ATCGTGCCCGACAAA CG-GCCGCAT CAG ATGCGGCACG ACCAAGCCGATGAAA TERM 2589 3260564 - 3260548 - H 78 -5 -4.72986 | GACGGCGACCAAAAA CCGGAG TCGGG CGCCGG GGAGAGCACGACATA RPD_2925 3260895 - 3262040 + | GGDEF domain-containing protein TERM 2590 3262989 - 3262936 - g 86 -7.4 -4.89852 | gap 3 CGAGAGCTACAAAAA CGTCCAGCGCTGGACCA-AGGC-GATC GGG GACCGGCCGGCGGTCAAGCGC-GGCCG CATCGTCAACCGTGT RPD_2926 3262220 - 3263098 + | putative glutathione S-transferase YghU RPD_2927 3263661 - 3263164 - | hypothetical protein TERM 2591 3263199 - 3263248 + g 71 -12.8 -3.30159 | gap 3, overlap 3263200 CGCCGATCCGGATCA CGCCGCCCTCGAGCACGCGGGCGGT GAG ACCGCC-GCG-GC-CGCGGACGGCA TTGTAGCCGCCTTCG TERM 2592 3263200 - 3263247 + g 77 -16.3 -2.57881 | gap 3, overlap 3263199 GCCGATCCGGATCAC GCCGCCCTCGAGCACGCGGGCGGT GAG ACCGCC-GCG-GC-CGCGGACGGC ATTGTAGCCGCCTTC RPD_2928 3264132 - 3263722 - | hypothetical protein RPD_2929 3264377 - 3264601 + | hypothetical protein RPD_2930 3264650 - 3265324 + | abortive infection protein TERM 2593 3265301 - 3265334 + T 74 -14.6 -2.57132 | overlap 3265300 GCAATCGGCACCCTG GCCTTCGCACTCGG ACTGGC CTGAGCGCGAAGGC ATTGTCGCGGCACGG RPD_2931 3265625 - 3265350 - | hypothetical protein TERM 2594 3265960 - 3265917 - R 81 -2.4 -5.18726 | gap 1, opp_overlap 3265921, overlap 3265918 3265919 3265921 GCGTCAGAACAAAAA GTGAG-AGCTCCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTT GTCCCATATCGCCGG RPD_2932 3267849 - 3265987 - | K+ potassium transporter TERM 2595 3266479 - 3266422 - G 100 -18.3 -3.85698 | gap 1, opp_overlap 3266428 3266478, overlap 3266425 CGCGGCGGTCAGAAA CACCGCGGTGCCGCGGGCGCGC-GACAC GTT GGGTCCGAGCGCGCGCAGCACCACGTCG AGCGGCACCGCCTGC TERM 2596 3266476 - 3266425 - G 100 -20.8 -2.70946 | gap 1, opp_overlap 3266428, overlap 3266422 GGCGGTCAGAAACAC CGCGGTGCCGCGGGCGCGC-GACAC GTT GGGTCCGAGCGCGCGCAGCACCACG TCGAGCGGCACCGCC TERM 2597 3266722 - 3266704 - G 72 -13.2 -3.21416 | opp_overlap 3266691, overlap 3266691 3266689 CAGCGCCATCACGAA CGACACCA GAA TGGTGTCG ATCATCATCGTGCTT TERM 2598 3267057 - 3267025 - G 71 -3.3 -4.59773 | opp_overlap 3267015, overlap 3267027 CCCCATCCGGAAAAA CGGATTCTGGATCGC GGA GGGATCGTGAATCAG CAACGCGCCCTGGCC TERM 2599 3267190 - 3267162 - G 74 -12.3 -3.53444 | overlap 3267144 CCATGTCGGTGTAAA GGGCCTCGCCGCC GGT GACGGCGAGCACC ACCGAGCCGAGCGCG RPD_2933 3269094 - 3268231 - | tetratricopeptide TPR_2 RPD_2934 3269853 - 3270026 + | hypothetical protein TERM 2600 3270036 - 3270089 + F 83 -12.4 -4.09215 | gap 1, overlap 3270037 GCTTAGCGGGTTCGC GACGGGTTGACGCAGCCCTGACGTC CGCAC GACG-CAGGGCTGCCATAACCCGCA TTTATGATTGATCTG TERM 2601 3270037 - 3270088 + F 81 -15.9 -3.04806 | gap 1, overlap 3270036 CTTAGCGGGTTCGCG ACGGGTTGACGCAGCCCTGACGTC CGCAC GACG-CAGGGCTGCCATAACCCGC ATTTATGATTGATCT RPD_2935 3270217 - 3270513 + | hypothetical protein TERM 2602 3270591 - 3270568 - T 100 -11.6 -5.02323 | opp_overlap 3270563 3270562, overlap 3270569 GGACCACAAAGAAAA CGCCGCGGGC ATCA GCACGCGGCA TTGGCATTTTCAGGG TERM 2603 3270590 - 3270569 - T 77 -12.9 -3.60309 | opp_overlap 3270563 3270562, overlap 3270568 GACCACAAAGAAAAC GCCGCGGGC ATCA GCACGCGGC ATTGGCATTTTCAGG RPD_2936 3271265 - 3270645 - | GCN5-related N-acetyltransferase TERM 2604 3271375 - 3271362 - R 71 -8.1 -3.92324 | CTTTTCAAGATCAAA TGGCG GGCA CGCCA GGGAAAACGACTGGC RPD_2937 3271936 - 3271538 - | phenylacetic acid degradation-like protein RPD_2938 3273461 - 3272181 - | acetylornithine deacetylase RPD_2939 3273591 - 3273854 + | hypothetical protein RPD_2940 3274225 - 3273902 - | hypothetical protein TERM 2605 3273940 - 3273973 + g 86 -16.9 -3.33696 | gap 1 ATTGCAGCGCCGGCT TCGC-GATCAGCGTGA ATG TCGCGCTGATCAGCGA TTGCTTGGACGCAGG TERM 2606 3275437 - 3275388 - R 70 -12.3 -3.17392 | gap 1, opp_overlap 3275398, overlap 3275393 3275396 GATTTTCGAACGCAA TCGAACAACAGCGGAGCAAGAG GATTTGG CGGTTGCTCCGCTGCTG-TCGA GTTCGCCGGAGTTAC TERM 2607 3275433 - 3275393 - R 70 -11.9 -3.20991 | opp_overlap 3275398, overlap 3275388 3275396 TCGAACGCAATCGAA CAACAGCGGAGCAAGAG GATTTGG CGGTTGCTCCGCTGCTG TCGAGTTCGCCGGAG TERM 2608 3275430 - 3275396 - R 74 -10 -3.74184 | opp_overlap 3275398, overlap 3275393 3275388 AACGCAATCGAACAA CAGCGGAGCAAGAG GATTTGG CGGTTGCTCCGCTG CTGTCGAGTTCGCCG RPD_2941 3275997 - 3275449 - | CreA TERM 2609 3276439 - 3276429 - g 72 -8.2 -4.08216 | TCAGCCGCCCCAAAA GCGG TAT CCGC GGAAGCATCACCAAC RPD_2942 3276217 - 3277944 + | hypothetical protein RPD_2943 3278169 - 3279110 + | polysaccharide deacetylase RPD_2944 3279150 - 3279713 + | hypothetical protein RPD_2945 3280169 - 3279717 - | DoxX TERM 2610 3280213 - 3280196 - R 81 -14.1 -3.60792 | CTGGCAACGGCGAAA GCGGCGC AAAC GCGCCGC AAGTATGAAGGGTCG TERM 2611 3280285 - 3280256 - R 71 -8.4 -3.95071 | opp_overlap 3280255, overlap 3280258 CAAACGGTCAAACAA TAGGCCGGCGGC TTACGC ACCGCCGGCCGG GTCATTATTCACTGC TERM 2612 3280283 - 3280258 - R 86 -15.4 -3.55603 | opp_overlap 3280255, overlap 3280256 AACGGTCAAACAATA GGCCGGCGGC TTACGC ACCGCCGGCC GGGTCATTATTCACT RPD_2946 3282622 - 3280313 - | malic enzyme TERM 2613 3281188 - 3281216 + g 70 -2.3 -4.63932 | gap 1, overlap 3281186 3281186 CCTCGACCACCGACG GC-CGCCCGACC AGAATC GGTCGCGCCAGC TTTTCTTCGAGGATC TERM 2614 3281503 - 3281466 - G 76 -8.3 -4.25283 | opp_overlap 3281466 AGCCGCGGATCAAAA GGGCTCGGGATCAGCGA TCCC TCACCGAAGCCGAGCAC TTCGTCGGTGTCGAG TERM 2615 3282032 - 3282011 - G 73 -15.1 -2.88861 | opp_overlap 3282021 3282022 CAGCAGGTTCAGACA CGCCAGCGC AGCG GCGCCGGCG CCGGCGGTGACGATT TERM 2616 3282657 - 3282671 + r 74 -5.6 -4.4595 | overlap 3282659 GTCGTCGGCATCGGA CCGTCG CGT CGACCG TTTTCAGTTTTCTGG aspS 3284447 - 3282675 - | aspartyl-tRNA synthetase TERM 2617 3283304 - 3283269 - G 100 -11.1 -4.72272 | opp_overlap 3283284 3283286 3283298 GCCCGCGACGAAAAA CGCGGCGTCGCCC-GCC TTCA GGCCGAGCG-CGGCGCG GATCGCTTCGGTGCG TERM 2618 3283722 - 3283703 - G 77 -3.5 -4.7373 | overlap 3283705 CCATCGCAGCAAAAA CATCGTC TTGCGT GACGAAG CTCATCTCGACGTCG TERM 2619 3284566 - 3284546 - H 74 -9.7 -3.90291 | ATCGCGGCAACCAAA TGCGGCC TTCGGTC GGCCGCA TTCCAACGCCTTGAC TERM 2620 3285725 - 3285750 + G 81 -11.1 -4.07568 | CAATGCCACCTATCT GGCGGGGCTTG CGGC CAAGCTCGGCC TTTTCACCACCCAGG RPD_2948 3284718 - 3286196 + | hypothetical protein TERM 2621 3287457 - 3287435 - g 77 -10.5 -4.00407 | ATCGAAAAAGGCAAA GTGGTGCGG GTCGA CCGCACCGC GGACGCAGGACGGCC RPD_2949 3286310 - 3287488 + | ribonuclease D RPD_2950 3287485 - 3288408 + | hypothetical protein RPD_2951 3289930 - 3288425 - | Ppx/GppA phosphatase RPD_2952 3292222 - 3289943 - | polyphosphate kinase RPD_2953 3292963 - 3292286 - | hypothetical protein RPD_2954 3293639 - 3293010 - | CDP-alcohol phosphatidyltransferase RPD_2955 3293822 - 3294895 + | phosphoribosylaminoimidazole synthetase RPD_2956 3294901 - 3295548 + | phosphoribosylglycinamide formyltransferase RPD_2957 3295817 - 3295614 - | cold-shock DNA-binding domain protein TERM 2622 3295874 - 3295846 - H 100 -13.8 -5.4251 | TCTAGACACAAAAAA GACGCGGCGCGC TCAAT GCACGCCACGCC ACAAACGGCGCTCCA RPD_2958 3296352 - 3297098 + | cyclic nucleotide-binding TERM 2623 3297102 - 3297122 + T 76 -13.9 -3.17723 | GGCACCGCCTGACGG CGCCGCGCC GCC GGCGCGGAG TTGCCTTCGAAATCG RPD_2960 3297752 - 3297342 - | hypothetical protein TERM 2624 3298024 - 3297997 - R 78 -14.9 -3.01712 | gap 1, opp_overlap 3297997 CTCGCTTTTCTAAGA CCGCGG-CCGCT CGATC AGCGGTCCGCGG TCTCGTCGGTCGCAA TERM 2625 3297997 - 3298024 + r 75 -14.9 -2.80816 | gap 1, opp_overlap 3297997 CTCGCTTTTCTAAGA CCGCGG-CCGCT CGATC AGCGGTCCGCGG TCTCGTCGGTCGCAA RPD_2961 3298465 - 3298043 - | nucleoside-diphosphate kinase RPD_2962 3298641 - 3300500 + | ABC transporter related RPD_2963 3301086 - 3300541 - | hypothetical protein RPD_2964 3301658 - 3301206 - | DNA polymerase III subunit chi RPD_2965 3303176 - 3301674 - | leucyl aminopeptidase TERM 2626 3304528 - 3304545 + G 73 -9.1 -3.96892 | AACTTCTCGATGGTC GGCGCAG TCGC TTGCGCC TTTGTCGTGAGGCTT RPD_2966 3303598 - 3304764 + | permease YjgP/YjgQ TERM 2627 3305610 - 3305620 + G 79 -4.6 -4.72272 | opp_overlap 3305605, overlap 3305605 AGTATCATAAGCTTC TGGC AAA GCCG TTTTTGCTGGCCGCA TERM 2628 3305792 - 3305829 + G 88 -7.5 -5.10029 | opp_overlap 3305782, overlap 3305793 ATGCATCCGCTTGCT GCGGCGTGGTTGCCCGT TTGT GTGGGCGGCCTCGCTGG TTTTTTGGCCTTGCT TERM 2629 3305793 - 3305828 + G 73 -11 -3.64933 | opp_overlap 3305782, overlap 3305792 TGCATCCGCTTGCTG CGGCGTGGTTGCCCGT TTGT GTGGGCGGCCTCGCTG GTTTTTTGGCCTTGC RPD_2967 3304778 - 3305863 + | permease YjgP/YjgQ TERM 2630 3305911 - 3305892 - g 72 -5.6 -4.36914 | gap 1, opp_overlap 3305903 CGCCCTCCGAGAAAA GCTGCCTGC TTC GC-GGCTGC GCACCATCGTGCGCA TERM 2631 3305903 - 3305933 + G 72 -13.3 -3.09516 | gap 1, opp_overlap 3305892 AAAAGCTGCCTGCTT CGC-GGCTGCGCAC CATC GTGCGCAGCAAGCG TTCGCTCATGGCGAG RPD_2968 3305869 - 3308370 + | organic solvent tolerance protein RPD_2969 3308439 - 3309368 + | hypothetical protein pdxA 3309468 - 3310472 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2632 3310957 - 3310991 + G 73 -6.4 -4.38712 | gap 1, overlap 3310947 GCAGCGGATCGTCGC CCGCGAGGACGACGA CGCCTA TGGTCGG-CTCGCGG TTTTGTCGAACTGGC TERM 2633 3311264 - 3311275 + G 72 -7.2 -4.1822 | overlap 3311240 CGAGCCGAAACCGTC GCCG TCTC CGGC TTTGTTGCCATGGCG ksgA 3310469 - 3311332 + | dimethyladenosine transferase RPD_2972 3311348 - 3312406 + | alcohol dehydrogenase GroES-like protein TERM 2634 3312477 - 3312444 - f 100 -16.9 -3.61715 | overlap 3312466 CAGGCGCTGGAACAA CTGCATTGCGGGT TCCACTAC ACCCGCAATGCAG GCCCGATTCTTGTCC TERM 2635 3312811 - 3312797 - g 70 -11.4 -3.36878 | opp_overlap 3312807 CGCATCGAGTGAGAA GTCGGC GAA GCCGAC AGAAGTCGCTTCGAT RPD_2973 3312588 - 3313613 + | hypothetical protein TERM 2636 3313633 - 3313656 + T 79 -13.8 -3.50869 | opp_overlap 3313633 AATGCGAGATAGAAA CGGCAGCGGC GCTC GCCGCTACCG TTGTCTCACATGCTA TERM 2637 3313656 - 3313633 - T 100 -16 -4.13648 | opp_overlap 3313633 AATGCGAGATAGAAA CGGCAGCGGC GCTC GCCGCTACCG TTGTCTCACATGCTA gmk 3314328 - 3313669 - | guanylate kinase RPD_2975 3315218 - 3314331 - | hypothetical protein RPD_2976 3316690 - 3315413 - | aminodeoxychorismate lyase RPD_2977 3318158 - 3316893 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2638 3317381 - 3317393 + g 70 -10.5 -3.62572 | overlap 3317380 3317382 3317388 CTTCGGCGTAGATCC GCGCG CCG CGCGC TTTCGCGTGCTCGTA TERM 2639 3317452 - 3317483 + g 74 -5.8 -4.57073 | gap 1, opp_overlap 3317451 3317452, overlap 3317424 3317453 3317476 TCGCCCATGACGAAG CCGTCGCGATCCTTG TCG TACGGA-CGCGACGC TTTTTGCGGCGCGTC TERM 2640 3317989 - 3317977 - G 74 -7.7 -4.26076 | opp_overlap 3317966 TGATCGGGATTAAAA GTACC GTT GGTAC CATCGCCGCGCGGGA TERM 2641 3318235 - 3318197 - R 76 -12.5 -3.51232 | opp_overlap 3318200, overlap 3318200 CGCGGTCCAAAGCAA GAAGCCGG-TGGACCGCTG AAA CA-CGGCCCGTCCGGCTTC ATCATCACCGCGCAG TERM 2642 3318232 - 3318200 - R 71 -8.4 -3.89354 | opp_overlap 3318200, overlap 3318197 GGTCCAAAGCAAGAA GCCGG-TGGACCGCTG AAA CA-CGGCCCGTCCGGC TTCATCATCACCGCG TERM 2643 3318244 - 3318267 + r 90 -8.8 -4.82901 | CGGCTTCATCATCAC CGCGCAGAGC TTCA GCTCTTTGCG TTTTTCTCAAGGAAC acpP 3318494 - 3318255 - | acyl carrier protein RPD_2979 3319531 - 3318794 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 2644 3319663 - 3319677 + H 73 -11.4 -3.55524 | opp_overlap 3319643 3319663, overlap 3319659 ACCGGGCTGCAACCA GGCGTG GCA CACGCC TTGCTTTGCGTCGTT TERM 2645 3320439 - 3320465 + G 74 -5.8 -4.56597 | overlap 3320404 3320442 CCGGCATCCTCACGC TGGTGACGCTGG CAT TCGGCGTCATGA TTTTTGCCGGCGGCG RPD_2980 3319712 - 3321124 + | ethanolamine permease TERM 2646 3322495 - 3322460 - g 71 -14.6 -2.65112 | AACGTATGCAGATCA CCGACGATGCCGGGCG GCTG CGCCCGCCCTCGCCGA ACCCGCTGCTCGGCG RPD_2981 3321148 - 3322542 + | ethanolamine ammonia lyase large subunit TERM 2647 3322606 - 3322662 + G 80 -15 -3.47617 | gap 2, overlap 3322607 3322624 CGGAATGGCGCAAGG TCTCGCCGGCGCGGCTGGCGCTGGGCCG TGT CGGCACGG-GCCTGCCGA-CCGACGAGG TTCTGCGTTTCGGCT TERM 2648 3322607 - 3322661 + G 77 -16.3 -2.68088 | gap 2, overlap 3322606 3322624 GGAATGGCGCAAGGT CTCGCCGGCGCGGCTGGCGCTGGGCCG TGT CGGCACGG-GCCTGCCGA-CCGACGAG GTTCTGCGTTTCGGC RPD_2982 3322539 - 3323354 + | ethanolamine ammonia-lyase small subunit TERM 2649 3323387 - 3323352 - T 83 -9.6 -4.36914 | overlap 3323355 3323357 CCCGGTCCGACAAAA TAACAGCCGCGCCACC TGAC GGCGACGCGGCCACGA ACATGATGTCCCGAG TERM 2650 3323384 - 3323355 - T 100 -13.5 -4.30995 | overlap 3323352 3323357 GGTCCGACAAAATAA CAGCCGCGCCACC TGAC GGCGACGCGGCCA CGAACATGATGTCCC TERM 2651 3323382 - 3323357 - T 93 -16.1 -3.75581 | overlap 3323355 3323352 TCCGACAAAATAACA GCCGCGCCACC TGAC GGCGACGCGGC CACGAACATGATGTC RPD_2983 3324432 - 3323479 - | malonyl CoA-acyl carrier protein transacylase TERM 2652 3324387 - 3324361 - G 70 -10.8 -3.53012 | overlap 3324365 CTTCGCTGCCGGAAA GGCATCGGCCAG CGC CTTGCCCATGCC GACCGCTTGCGAGCC RPD_2984 3324546 - 3325997 + | GGDEF domain-containing protein TERM 2653 3326283 - 3326302 + F 75 -2.9 -4.83615 | gap 1 ACAGGAAAGGACTGT CATGCCTC TTTAT GAG-CATG TTTTTCTCGCGCGTC rpsF 3326284 - 3326766 + | 30S ribosomal protein S6 TERM 2654 3326954 - 3326977 + G 77 -10.9 -3.7829 | opp_overlap 3326945 3326942 GAAGCAGCGCGAACT CGCGCGCGC CATCAA GCGCGCCCG TTTCCTCGGTCTGCT rpsR 3326772 - 3327011 + | 30S ribosomal protein S18 TERM 2655 3327046 - 3327015 - f 72 -12.2 -3.29511 | opp_overlap 3327020, overlap 3327017 3327020 GTCATTCGCTGATAA TATCACCCGCGGCG TTCG CGCCGCGGGTTTCA CCTCATGTTGCAAGT TERM 2656 3327044 - 3327017 - f 73 -12.6 -3.21593 | opp_overlap 3327020, overlap 3327015 3327020 CATTCGCTGATAATA TCACCCGCGGCG TTCG CGCCGCGGGTTT CACCTCATGTTGCAA TERM 2657 3327041 - 3327020 - f 87 -18.7 -2.80074 | opp_overlap 3327020, overlap 3327017 3327015 TCGCTGATAATATCA CCCGCGGCG TTCG CGCCGCGGG TTTCACCTCATGTTG TERM 2658 3327020 - 3327041 + F 100 -18.7 -3.63782 | opp_overlap 3327017 3327015 3327020 TCGCTGATAATATCA CCCGCGGCG TTCG CGCCGCGGG TTTCACCTCATGTTG TERM 2659 3327915 - 3327942 + G 77 -9.9 -3.99405 | gap 1, overlap 3327938 CGCCACGCTGCACAC GCTGACGATGGC CGCGC GCCATCG-CGGC TTTCTGCTCAGTTCG RPD_2987 3327142 - 3328089 + | hypothetical protein rplI 3328125 - 3328709 + | 50S ribosomal protein L9 TERM 2660 3328732 - 3328766 + T 95 -18 -3.53444 | opp_overlap 3328739, overlap 3328733 3328739 CGCGCCCCATCCTCA ACGAAAAGCCCGACCT TTC AGGTCGGGCTTTTTGC TTTGAGGAGACCTCG TERM 2661 3328733 - 3328765 + T 100 -21.5 -2.71924 | opp_overlap 3328739, overlap 3328732 3328739 GCGCCCCATCCTCAA CGAAAAGCCCGACCT TTC AGGTCGGGCTTTTTG CTTTGAGGAGACCTC TERM 2662 3328739 - 3328759 + T 100 -16.9 -4.98531 | opp_overlap 3328739, overlap 3328733 3328732 CATCCTCAACGAAAA GCCCGACCT TTC AGGTCGGGC TTTTTGCTTTGAGGA TERM 2663 3328759 - 3328739 - T 100 -16.9 -4.41494 | opp_overlap 3328733 3328732 3328739 CATCCTCAACGAAAA GCCCGACCT TTC AGGTCGGGC TTTTTGCTTTGAGGA RPD_2989 3329905 - 3328784 - | hypothetical protein TERM 2664 3329383 - 3329438 + g 86 -17.4 -3.31144 | gap 1, overlap 3329370 3329433 GTTCCTTCGCCGGCG GTTGCTCCGCAGGCGCCGGCGCGGCGG TCT CTGCCGCGGCAGCGCCTTCGGC-CGGC TTGTCCGCCTCGGGC TERM 2665 3329527 - 3329511 - G 71 -15.1 -2.62184 | TCGGCCTGCACAGGA GCGCCCG CCT CGGGCGC GGCAGCTTCGGGCCG TERM 2666 3329945 - 3329928 - R 100 -8.3 -5.63103 | opp_overlap 3329927 3329940, overlap 3329929 TCCGAAGCAAAAAAA TCGCCGC GACA GCGGCGG TGACGTTTTAACGGA TERM 2667 3329944 - 3329929 - R 83 -11.8 -3.96777 | opp_overlap 3329927 3329940, overlap 3329928 CCGAAGCAAAAAAAT CGCCGC GACA GCGGCG GTGACGTTTTAACGG RPD_2990 3330475 - 3330275 - | hypothetical protein TERM 2668 3330693 - 3330724 + H 71 -5.9 -4.32048 | overlap 3330711 ATTCCGCCCTGATCG CGCTCAGGATC-GCC GCAG GGCTGATCG-GAGCG TTTTGCCTGTTCTTG RPD_2991 3330985 - 3332481 + | replicative DNA helicase TERM 2669 3332618 - 3332594 - g 70 -10.6 -3.55444 | opp_overlap 3332578 GCCTGAGGCCGCAAA GGCTGCGGCG CTCGC CGCCGCGACC GCTACGGCGCCCGGC TERM 2670 3333682 - 3333702 + G 76 -8.2 -4.1822 | overlap 3333685 AGGTGCTGACCAGCC TCGGCGCG CGCTA CGCGCGGA TTTATTCCGGTGGCG RPD_2992 3332532 - 3333761 + | alanine racemase RPD_2993 3334047 - 3333793 - | hypothetical protein TERM 2671 3333979 - 3333960 - G 100 -10.6 -4.64598 | overlap 3333951 3333949 3333948 3333961 3333972 GAACCAGCGCAAAAA CGGCGCCG AACA CGGCGCCC ATGGCGAAATGTCCG TERM 2672 3333978 - 3333961 - G 77 -14.1 -3.38036 | overlap 3333951 3333949 3333948 3333960 3333972 AACCAGCGCAAAAAC GGCGCCG AACA CGGCGCC CATGGCGAAATGTCC RPD_2994 3335274 - 3334063 - | hypothetical protein TERM 2673 3334184 - 3334164 - G 79 -7.5 -4.48987 | overlap 3334165 GCGGCAGAATGAAAA CCGGGCC GAGCGCA AGCCCGG TCAGATGCGCCAGCG TERM 2674 3334850 - 3334839 - G 72 -7.2 -4.25104 | overlap 3334840 CCGCGTTGATGAAAA CCGC TGGA GCGG ACAGCGCGAGGAGCA TERM 2675 3335625 - 3335642 + G 72 -5.5 -4.431 | gap 1 CATGGCCGAACTCGA CCG-CGTC ACC GGCGGCGG TTTTGTGCGTGGCTC RPD_2995 3335356 - 3336843 + | DNA repair protein RadA TERM 2676 3336898 - 3336880 - f 74 -11.6 -3.48276 | CGTGCCGCTATACAA CGCGCGCG CAT CGCGGGCG GGCGCCCAAACGTTT RPD_2996 3337057 - 3337689 + | colicin V production protein RPD_2997 3337713 - 3339257 + | amidophosphoribosyltransferase RPD_2998 3339430 - 3340173 + | short-chain dehydrogenase/reductase SDR TERM 2677 3340987 - 3341029 + G 73 -14.1 -3.14344 | gap 1, opp_overlap 3341011 GCAGGCTTCGGAGTT CGGCATCACCGCCGGCGGGC AGAA GCTCG-CGGCGCTGCTGCTG TTCGTCAACGACGTC RPD_2999 3340256 - 3341482 + | putative urea/short-chain binding protein of ABC transporter TERM 2678 3341513 - 3341534 + T 77 -13 -3.60151 | opp_overlap 3341511 TTCCGACAATCCAGA TGGCCGGG CTCAGT CCCGGCCA TTATCGTTTCGGGGC RPD_3000 3341913 - 3341569 - | GCN5-related N-acetyltransferase RPD_3001 3342311 - 3342589 + | hypothetical protein RPD_3002 3343302 - 3342670 - | phage tail Collar TERM 2679 3343652 - 3343665 + H 100 -2.3 -5.85178 | overlap 3343653 TTGCACTCAGTCCGT GTCGC GTCT GCGAG TTTTTTTTAGATATT TERM 2680 3345803 - 3345783 - g 77 -13.9 -3.41051 | opp_overlap 3345777, overlap 3345785 CGATCGTGATCACAA CACCGGCCG GCA CGGCCGGGG CGCGCGATGTCGTGC TERM 2681 3345801 - 3345785 - g 78 -15.1 -3.27653 | opp_overlap 3345777, overlap 3345783 ATCGTGATCACAACA CCGGCCG GCA CGGCCGG GGCGCGCGATGTCGT TERM 2682 3347897 - 3347862 - g 72 -11.9 -3.55444 | gap 1, opp_overlap 3347874, overlap 3347874 CCGGCACTCCGGAAA GCACGGTCGAAAGCCG CTGGC CGGCTTTCG-CCTCGC ACGGCAGCGGCGCGC RPD_3003 3343763 - 3348850 + | Outer membrane autotransporter barrel RPD_3004 3350156 - 3348891 - | major facilitator transporter engA 3351535 - 3350153 - | GTP-binding protein EngA TERM 2683 3350360 - 3350387 + g 75 -14 -3.28712 | GTAGTTCAGCTTCAA CCGGCGGCCGGC GACC GCCGGCGGCGGG TTCTGCGCAACCGCC TERM 2684 3351666 - 3351622 - R 70 -10 -3.54424 | TGTCAGCGCTGGAAA GTGCCGC-TCGGCATCGGCGCC GGG AACGCCGATGGCGCTGCGG-AC TGCTCGGGCTGGGCC RPD_3006 3352148 - 3351609 - | hypothetical protein RPD_3007 3352856 - 3352203 - | hypothetical protein panB 3353842 - 3353018 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2685 3353323 - 3353300 - G 89 -10.9 -4.21908 | GACCACGACGGAAAA CGCGCCGGC GTCGGA GACGGCGCG GGCGTCGGCCTCGAT RPD_3009 3354430 - 3353846 - | NnrU RPD_3010 3354571 - 3355575 + | twin-arginine translocation pathway signal TERM 2686 3355591 - 3355629 + T 91 -9.4 -4.58283 | gap 1, opp_overlap 3355577 3355580 3355597, overlap 3355593 AGCACGGCGCACGCC CACGAAGC-GCGGCGGC CGTTAC GCCGCCGCCGCAACGCG TTTTTCCGCCGGTTA TERM 2687 3355623 - 3355597 - T 73 -13 -3.15544 | gap 1, opp_overlap 3355593 3355591, overlap 3355577 3355580 GCGCACGCCCACGAA GC-GCGGCGGC CGTTAC GCCGCCGCCGC AACGCGTTTTTCCGC RPD_3011 3356088 - 3355642 - | hypothetical protein RPD_3012 3356503 - 3356225 - | hypothetical protein TERM 2688 3356689 - 3356675 - R 86 -7.8 -4.67982 | opp_overlap 3356674 3356675, overlap 3356670 TGCGATCGAAGAAAA CGCTGC GGC ACAGCG ATTTCCTGCGGTCGC TERM 2689 3356924 - 3356911 - R 72 -4.5 -4.59773 | TGTCAGGCTCAAAAA CAACG AGGG CGTCG GCGAACACGTCAGGA TERM 2690 3357102 - 3357150 + r 77 -13.8 -3.31144 | gap 1, opp_overlap 3357131 3357132 CCTCTTCGTCGACCA GGGCCGTCGCCGGGGAGCCGCTT GAAG AAGCG-CGCCGCGCCGATGGTCC TTGTGACGCTGCCGG RPD_3013 3357373 - 3357197 - | hypothetical protein TERM 2691 3357419 - 3357407 - R 91 -3.3 -5.51402 | opp_overlap 3357415 ACACATCGAAAAAAA CAGCG TCC CGCTT AAGGAAGTGTTGATG gatB 3359316 - 3357832 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 2692 3358967 - 3358983 + g 82 -12.3 -3.98214 | ACCACGACAATTCCC TCGCCGA CGA TCGGCGA TTTGTACTGGCTGAT RPD_3015 3360546 - 3359446 - | histidine kinase, dimerisation/phosphoacceptor gatA 3362110 - 3360632 - | aspartyl/glutamyl-tRNA amidotransferase subunit A RPD_3017 3362456 - 3362250 - | hypothetical protein TERM 2693 3362543 - 3362531 - R 91 -4.8 -5.37593 | CGTCAAAGCAAAAAA GGTC TACTC GACC ACCTTCGGCACCAGG gatC 3362821 - 3362534 - | aspartyl/glutamyl-tRNA amidotransferase subunit C RPD_3019 3363985 - 3362909 - | 2-nitropropane dioxygenase, NPD TERM 2694 3364307 - 3364294 - H 82 -3.1 -5.1356 | overlap 3364295 CGTGACCAACAAAAA CCATC ACGC GATGA TCAAGGGAGGATGAA TERM 2695 3364740 - 3364721 - g 75 -11.4 -3.6968 | opp_overlap 3364712, overlap 3364712 CTACAACGGCAACAA GATCGCCG ATTT CGGCGACC CGACCGGCCTGAAGA RPD_3020 3364326 - 3365261 + | putative cyclase RPD_3021 3365917 - 3365300 - | regulatory protein, TetR TERM 2696 3365833 - 3365883 + g 72 -11.7 -3.60805 | overlap 3365834 GCGACAGGCCGCCGA TGCCGTCACGCCTGATCGCGGCG TGGGC CGAAGCGATCAGGCGTTCCCGCG TTTCCAGTCGGCTCT TERM 2697 3365932 - 3365986 + r 100 -17.9 -3.75718 | gap 1, opp_overlap 3365950 3365953, overlap 3365937 3365938 TTCATTCGGTTCCGT CGCAACCTGTGAACGGAAGCAGGCGG GGCG CCGCC-GCTTCCGTCCACCGCTTTCG TTACTTTTGCTTCGA TERM 2698 3365937 - 3365981 + r 93 -15 -4.07675 | gap 1, opp_overlap 3365950 3365953, overlap 3365932 3365938 TCGGTTCCGTCGCAA CCTGTGAACGGAAGCAGGCGG GGCG CCGCC-GCTTCCGTCCACCGC TTTCGTTACTTTTGC TERM 2699 3365938 - 3365980 + r 90 -18.5 -3.0352 | gap 1, opp_overlap 3365950 3365953, overlap 3365937 3365932 CGGTTCCGTCGCAAC CTGTGAACGGAAGCAGGCGG GGCG CCGCC-GCTTCCGTCCACCG CTTTCGTTACTTTTG RPD_3022 3367972 - 3365987 - | 67 kDa myosin-cross-reactive antigen like TERM 2700 3366861 - 3366877 + g 79 -8.7 -4.42464 | overlap 3366863 TAGAATTTCTCGGGC TTGCCGA AGA TCGGCGA TTTCTTTGCCAGGTT TERM 2701 3367027 - 3367043 + g 78 -10.1 -4.08692 | opp_overlap 3367012, overlap 3367021 3367037 CGACGTCATTCGGCC CGACGGC GAT GCTGTCG TTTTGACCAGCCTTC TERM 2702 3368257 - 3368227 - g 72 -14 -3.05384 | gap 1 CTCCCGCTGATCGAA GC-CGCCGCGCAC TGGCCC GCGCGCGGCGCGC TGCTCGGCCTCGACC TERM 2703 3368315 - 3368285 - g 81 -16.2 -3.13522 | overlap 3368283 ACCTCGGCACCAAGA CGATCGGAGTCGCA GTC TCCGACCCCGATCG CAAGCTCGCCACCGG RPD_3023 3368197 - 3368679 + | Holliday junction resolvase YqgF RPD_3024 3368726 - 3369112 + | SEC-C protein RPD_3025 3370860 - 3369205 - | acyl-CoA dehydrogenase-like RPD_3026 3371696 - 3370980 - | peptidase M15D, vanX D-ala-D-ala dipeptidase RPD_3027 3373381 - 3371750 - | thiamine pyrophosphate enzyme-like TPP binding region pyrB 3373564 - 3374517 + | aspartate carbamoyltransferase catalytic subunit RPD_3029 3374537 - 3375838 + | dihydroorotase RPD_3030 3375858 - 3376448 + | putative glycerol-3-phosphate acyltransferase PlsY RPD_3031 3376534 - 3377802 + | DNA processing protein DprA, putative TERM 2704 3377965 - 3377930 - T 77 -2.5 -5.07567 | opp_overlap 3377934, overlap 3377934 3377935 GCAGACCCCAAAAAA GCAACGGCCCGAAGT TGTGAC ACTTCGAGCCATCTT GGAGGCGGACGTACA TERM 2705 3377961 - 3377934 - T 76 -9.9 -3.93769 | opp_overlap 3377934, overlap 3377930 3377935 ACCCCAAAAAAGCAA CGGCCCGAAGT TGTGAC ACTTCGAGCCA TCTTGGAGGCGGACG RPD_3032 3378584 - 3378375 - | hypothetical protein TERM 2706 3379878 - 3379866 - g 71 -3.3 -4.66833 | GGCCAAGGCGAAAAA CGCCC AGG AAGCG CATGAGGCGATCCGC TERM 2707 3381396 - 3381366 - g 70 -10.4 -3.68222 | overlap 3381369 3381384 CGGCAAGGCCAAGAA GAAGGCTCCGGC GAAGAAG GCCGCAGCCTCC GGCGAGGCCAAGCCG TERM 2708 3381393 - 3381369 - g 70 -8.5 -3.97139 | overlap 3381366 3381384 CAAGGCCAAGAAGAA GGCTCCGGC GAAGAAG GCCGCAGCC TCCGGCGAGGCCAAG RPD_3033 3378832 - 3381576 + | DNA topoisomerase I RPD_3034 3381579 - 3383924 + | ribonuclease R RPD_3035 3383921 - 3384352 + | hypothetical protein RPD_3036 3384458 - 3385213 + | NUDIX hydrolase rpmG 3385444 - 3385611 + | 50S ribosomal protein L33 TERM 2709 3385641 - 3385658 + T 93 -14.1 -4.21922 | ACGGATAGAGTTTTG CGGGGCC TTCG GGCCCCG TTTGCTTTTGCGTCG pleD 3387237 - 3385864 - | response regulator PleD TERM 2710 3386502 - 3386518 + g 71 -9.3 -3.79906 | CGCCGATTTCCAGTC CGCGCAG CAG CCGCGCG TTGTTCTCGGCATCG RPD_3039 3387612 - 3387247 - | response regulator receiver TERM 2711 3387884 - 3387910 + G 73 -9.5 -3.98661 | gap 2 ATCGGCCCGGAGACG CTGCGGCAGTCGG CCG CCGAC--CCGCAG TTTCTGATCAGTGTG TERM 2712 3387962 - 3388008 + G 72 -11.4 -3.58343 | GACGCAACCGTGAAG GCGTTCGCGACCTCGGCCGG CCTCGAC CCGACCAATGTCGCGGCCGC TTTGCAGGTGCTCGA RPD_3040 3387755 - 3388054 + | hypothetical protein RPD_3041 3388051 - 3389340 + | DNA polymerase IV TERM 2713 3389421 - 3389467 + T 70 -12.3 -3.1505 | gap 2, opp_overlap 3389420 3389419, overlap 3389410 ACGGGCCGGGAAACC GCCTTTGCCCTTGGAGACGCGGC TTC GCCGCGCCTC--AGGGTGACGGC TTCCTCCGCGCTCAT RPD_3042 3390322 - 3389501 - | hypothetical protein RPD_3043 3390659 - 3391126 + | endoribonuclease L-PSP RPD_3044 3391142 - 3391894 + | glycerophosphoryl diester phosphodiesterase RPD_3045 3391988 - 3393223 + | hypothetical protein RPD_3046 3393272 - 3393700 + | histidine triad (HIT) protein RPD_3047 3394171 - 3393710 - | hypothetical protein RPD_3048 3394595 - 3394251 - | hypothetical protein TERM 2714 3394389 - 3394335 - G 84 -17.1 -3.15544 | gap 1, overlap 3394340 CCTGACCGCGATGAA GGCAAGCAGTCCTGCCGCCACTGCGC CGTA GCGCAGCAGCGCCGGCAC-GCTCGCC AGCGCGCCCGGCGGC RPD_3049 3395332 - 3394592 - | AzlC-like TERM 2715 3394782 - 3394772 - G 76 -8.2 -4.27117 | overlap 3394773 GGTGGACAAGAGAAA CGCC AGC GGCG TCAGCAGCAGCACCG RPD_3050 3395483 - 3395842 + | type IV pilus assembly PilZ RPD_3051 3396903 - 3395860 - | lytic transglycosylase, catalytic TERM 2716 3397057 - 3397070 + G 71 -9.5 -3.79113 | CCGATCCCCTACATG GCGCG GACC CGCGC TTATTATCAGGCGAT TERM 2717 3397852 - 3397830 - g 77 -11.2 -3.84406 | GCGCGACTACAACAA CGTCGCCGCC ATG AGCGCCGACG AACTGGAGCGGCGAC RPD_3052 3396994 - 3397926 + | hypothetical protein RPD_3053 3398035 - 3398379 + | type IV pilus assembly PilZ TERM 2718 3398488 - 3398462 - f 76 -7.3 -4.2828 | gap 1 CCGGATGGATTAAAA CGTCGG-TCCTG ATCC CACGATCCGACG CGCGGTTATGACTGC RPD_3054 3398496 - 3400430 + | glycosyltransferase TERM 2719 3400577 - 3400556 - T 100 -11.5 -5.63517 | opp_overlap 3400556 3400553 CCGCCAAATAAAAAA GGCCGGCGA TCGC TCGGCGGCC TCATTCAATTGTCAC RPD_3055 3403006 - 3400601 - | ATPase AAA-2 TERM 2720 3400657 - 3400673 + g 86 -9.3 -4.66833 | overlap 3400659 CTGACTTCGGTTTCC GCGCTGC GCC GCCGCGC TTTTTGGCGTTGGGC RPD_3056 3403533 - 3403204 - | ATP-dependent Clp protease adaptor protein ClpS RPD_3057 3403994 - 3405388 + | hypothetical protein TERM 2721 3405440 - 3405461 + F 71 -13 -3.09823 | opp_overlap 3405426 3405425, overlap 3405436 TGCGCTGAACGTCAG CCGCTCCG CATTGC CGGAGCGG TATCATTTTCCGCCC RPD_3058 3405827 - 3407563 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2722 3407587 - 3407623 + T 100 -21 -3.53012 | gap 1, opp_overlap 3407592, overlap 3407592 CGATCTGGACCTTTT CAC-AACGCGGTCGGGC CCAG GCCCGGCCGCGTTTGTG TTTGCACGGCCACAG TERM 2723 3407592 - 3407617 + T 100 -19.7 -4.32857 | opp_overlap 3407592, overlap 3407587 TGGACCTTTTCACAA CGCGGTCGGGC CCAG GCCCGGCCGCG TTTGTGTTTGCACGG TERM 2724 3407617 - 3407592 - T 91 -17.5 -3.29511 | opp_overlap 3407592 3407587 TGGACCTTTTCACAA CGCGGTCGGGC CCAG GCCCGGCCGCG TTTGTGTTTGCACGG RPD_3059 3408536 - 3407808 - | heat shock protein DnaJ-like TERM 2725 3408519 - 3408506 - G 84 -9.5 -4.5464 | TATAGAGAACGAAAA CGGCG ATAA CGCCG GCGATCAATGTAGGC RPD_3060 3409420 - 3408680 - | hypothetical protein TERM 2726 3408779 - 3408741 - G 88 -14.6 -3.91911 | gap 2 GCGAGCCGAAGCAAA GCGTCACGGCCGCCGGCC GCATA GGCC-GCAGCCGCG-CGC AGCAGCTCGCGAAGC TERM 2727 3409477 - 3409512 + r 74 -14.7 -2.62613 | opp_overlap 3409469, overlap 3409476 3409474 CCTGAAAGGTTCAAT GCCGACGGCCCGC-GCC ACAC GGCTGCGG-CCGGCGGC CTATTTCACCTGCGC RPD_3061 3410340 - 3409513 - | hypothetical protein RPD_3062 3411533 - 3410610 - | putative chromosome partitioning protein ParA RPD_3063 3411762 - 3412613 + | pantoate--beta-alanine ligase RPD_3064 3413097 - 3412663 - | hypothetical protein TERM 2728 3412858 - 3412847 - G 76 -2.2 -4.91109 | gap 1, opp_overlap 3412852, overlap 3412848 TCTTCAGGAGAAAAA CGCGC GAT GC-CG GCCTCCCGCACCTTG RPD_3065 3415482 - 3413122 - | TonB-dependent receptor TERM 2729 3413605 - 3413567 - G 70 -11 -3.57263 | gap 2 AGTTCGACGCCGAAA TGCGTCGTCCGGTCGGCG TTGAC CGCCG-CCAG-CGCCGCA CCGGTGACATCCCGC TERM 2730 3415650 - 3415686 + H 91 -5.1 -5.37593 | TGGCGAGAGGGCTTT CTCGATCGTGCGC GAACATACCGA GCGGGCGGTCGAG TTTTTTGCTTTGACG TERM 2731 3415732 - 3415709 - H 81 -11.6 -3.96216 | opp_overlap 3415723 CTTTGACGCAAACAA CGCGACGGCA TCGT CGCCGGCGCG GCGTTTGACATCCAC TERM 2732 3415723 - 3415735 + H 70 -10.5 -3.60805 | opp_overlap 3415709 ACGCGACGGCATCGT CGCCG GCG CGGCG TTTGACATCCACTGT TERM 2733 3415880 - 3415903 + G 74 -7.4 -4.19577 | gap 1, overlap 3415874 GACCAGGGTGCCCTA CGCGCGTCCGT CGC ACGCA-GCGCG TTGTTTTCGCAATTG RPD_3066 3415841 - 3416563 + | cyclic nucleotide-binding RPD_3067 3417129 - 3416692 - | hypothetical protein RPD_3068 3418209 - 3417166 - | hypothetical protein TERM 2734 3418135 - 3418122 - G 75 -4.5 -4.64598 | gap 1, overlap 3418123 3418124 GAATCAGCGCAAAAA CGGCCG ACG CGG-CG ATCGCGGCCCAGATC RPD_3069 3418599 - 3418375 - | hypothetical protein TERM 2735 3418743 - 3418730 - R 78 -5.2 -4.77438 | AGGTAGGAGGAAAAA CCGG TCGATT CCGG AGGCTGACGCCGCGG RPD_3070 3419431 - 3418775 - | glutathione S-transferase-like RPD_3071 3419646 - 3419921 + | hypothetical protein RPD_3072 3420784 - 3419990 - | hypothetical protein RPD_3073 3421679 - 3420861 - | 2,5-didehydrogluconate reductase RPD_3074 3422155 - 3421760 - | helix-turn-helix type 3 RPD_3075 3423558 - 3422137 - | magnesium transporter TERM 2736 3422241 - 3422185 - G 81 -11.4 -3.94823 | gap 1, overlap 3422182 GAGAAACGAGAAGAA GCCGACCACGTCGGTCACCGTGGTGAC GAAC GTCCCCGAGGCGACGG-CGGGATCGGC GCGGACCCGGTCGAG RPD_3076 3423721 - 3424518 + | polysaccharide deacetylase TERM 2737 3425108 - 3425148 + G 75 -11.8 -3.65314 | ATGAGGGCATCGACG CGGTCGCGACCGC-GCTTGG CGA CCGCGCGGCGGTGGCG-CCG TTCTTCCGGATTCCC RPD_3077 3424636 - 3425958 + | polysaccharide deacetylase RPD_3078 3426110 - 3426352 + | prevent-host-death protein RPD_3079 3426357 - 3426797 + | PilT protein-like RPD_3080 3426884 - 3427300 + | hypothetical protein TERM 2738 3427277 - 3427293 + F 72 -4.4 -4.62069 | gap 1 CGTGGCAAGGTCGAC CCGAAGC TGAA GCT-CGG TTTTTGAGGTGACGG RPD_3081 3427458 - 3427868 + | hypothetical protein RPD_3082 3428371 - 3428129 - | hypothetical protein lipB 3428436 - 3429203 + | lipoyltransferase RPD_3084 3429200 - 3429523 + | hypothetical protein TERM 2739 3429629 - 3429609 - f 78 -6.9 -4.56597 | TCCGCCCTGTAAAAA CATCTCTAC AGC GTAGAAACG AATTCCGGAAGGCAC TERM 2740 3429655 - 3429678 + F 77 -13.8 -3.35679 | opp_overlap 3429644 3429658, overlap 3429656 3429658 GGCACCGCGGCCAAC TCAGCCGCCG GATG CGGCGGCTGC TTGTGGCTCGCCCCG TERM 2741 3429656 - 3429677 + F 83 -17.3 -2.61264 | opp_overlap 3429644 3429658, overlap 3429655 3429658 GCACCGCGGCCAACT CAGCCGCCG GATG CGGCGGCTG CTTGTGGCTCGCCCC TERM 2742 3429658 - 3429675 + F 74 -14.1 -2.8474 | opp_overlap 3429658 3429644, overlap 3429656 3429655 ACCGCGGCCAACTCA GCCGCCG GATG CGGCGGC TGCTTGTGGCTCGCC TERM 2743 3429675 - 3429658 - f 71 -14.1 -2.52543 | opp_overlap 3429656 3429655 3429658, overlap 3429644 ACCGCGGCCAACTCA GCCGCCG GATG CGGCGGC TGCTTGTGGCTCGCC RPD_3085 3429775 - 3430446 + | regulatory protein, TetR RPD_3086 3430443 - 3431369 + | cation diffusion facilitator family transporter RPD_3087 3433929 - 3431386 - | ATP-binding region, ATPase-like TERM 2744 3433868 - 3433813 - G 71 -12.5 -3.32769 | gap 2 CCCCCAAACGATGAA GGACGGGACCGCTGTCGCGAGCATCGT CGCC ACGGT-CACGCG-CAGCGGCGCCGGCC AATGATCGGAGGGAC RPD_3088 3434799 - 3434257 - | cytochrome B561 RPD_3089 3435315 - 3434869 - | hypothetical protein RPD_3090 3435854 - 3435312 - | MarR family transcriptional regulator TERM 2745 3435344 - 3435366 + g 89 -11.2 -4.24326 | overlap 3435345 CACTTTGAACTTCCA ACTGGCCGCG CAA TGCGGCCAGG TTTTCGGTGGTCTTT TERM 2746 3435345 - 3435365 + g 76 -14.7 -3.13511 | overlap 3435344 ACTTTGAACTTCCAA CTGGCCGCG CAA TGCGGCCAG GTTTTCGGTGGTCTT TERM 2747 3435826 - 3435778 - G 76 -14.7 -3.14564 | opp_overlap 3435785 3435793 3435795, overlap 3435782 3435790 3435823 GGATCGTCGTATGAA TCTATCATGACAGCATACTGCCA TAT TGGCAGTATGCTGTCAATATCGC TGGTGGCGACCGAAG TERM 2748 3435822 - 3435782 - G 87 -18.5 -2.56596 | opp_overlap 3435785 3435793 3435795, overlap 3435778 3435790 CGTCGTATGAATCTA TCATGACAGCATACTGCCA TAT TGGCAGTATGCTGTCAATA TCGCTGGTGGCGACC TERM 2749 3435814 - 3435790 - G 82 -17.3 -2.83641 | opp_overlap 3435785 3435793 3435795, overlap 3435782 3435778 GAATCTATCATGACA GCATACTGCCA TAT TGGCAGTATGC TGTCAATATCGCTGG RPD_3091 3436389 - 3436090 - | acylphosphatase TERM 2750 3436275 - 3436252 - G 78 -13.8 -3.61398 | GCGCCCTGCCAACAA CGCCTCGACG CTGC CGTCGCGGCG ATTGCGGACCCAGCC TERM 2751 3436443 - 3436410 - R 79 -10.9 -3.87815 | gap 1, opp_overlap 3436412 CTTCAGCCCCAGAAA CTGCGCGCCGC-GCTC TTC GACCAGCGACGCGCGG GTGACGCGGTCGATC RPD_3092 3437255 - 3436386 - | hypothetical protein TERM 2752 3437241 - 3437183 - G 76 -15.4 -2.87683 | gap 4, overlap 3437219 AGATCGCGTCATACA CCGACGCCGGCCGCAC-GCAGGCCGATCCC GAC AGGATC-GCCCGCAGCGCG-CCG-CGGCGG TTGCGCCAGGCCATC RPD_3093 3439337 - 3437262 - | carbamoyl-phosphate synthase L chain, ATP-binding RPD_3094 3439526 - 3439705 + | hypothetical protein TERM 2753 3440263 - 3440241 - g 100 -16.3 -5.29885 | AAGGCAAAAAGAAAA CGGCGGGGA AGTAA TCCCCGCCG CCTCACCGATCGATC RPD_3095 3439876 - 3440298 + | hypothetical protein RPD_3096 3440972 - 3440361 - | hypothetical protein RPD_3097 3441681 - 3441283 - | hypothetical protein TERM 2754 3442753 - 3442795 + G 89 -17.6 -3.34043 | CCTTTCCCTGGATCA CCGACGCCGCCGCGCTGC ACGCCTG GCAGCGCGGCTGCACCGG TTATCCGATCGTCGA TERM 2755 3442992 - 3443014 + G 80 -9 -4.1964 | overlap 3442994 CAGTGGGTCGCGGGC TCCGGCGCCG ATG CCGCGCCGTA TTTTCGCGTGTTCAA TERM 2756 3442994 - 3443012 + G 75 -11.6 -3.69449 | overlap 3442992 GTGGGTCGCGGGCTC CGGCGCCG ATG CCGCGCCG TATTTTCGCGTGTTC RPD_3098 3441798 - 3443261 + | deoxyribodipyrimidine photolyase TERM 2757 3443517 - 3443505 - g 78 -6.2 -4.70626 | overlap 3443514 CAAGAAGGCGAAAAA GGCC AAGAA GGCC CCCGCCAAGAAGGCC RPD_3099 3443353 - 3443751 + | hypothetical protein TERM 2758 3443779 - 3443801 + T 100 -12 -4.80882 | CGTCGGCAAGCGGAA GCCTCCGG ATCATCA CCGGAGGC TTTTTGCTGTGCGGT TERM 2759 3444757 - 3444782 + T 76 -11.1 -3.8062 | GGAGGACCGCTCTCC TGCCGTGTCGC GGGC GCGACGCCGCA TTGTTATGCCGCTTC RPD_3100 3445705 - 3444830 - | hypothetical protein TERM 2760 3445120 - 3445106 - G 72 -5.6 -4.32857 | overlap 3445107 3445108 GGTTTCAAACAGAAA TGCGCC CGC GGCGAA GAACGCCAGGGCGGC RPD_3101 3446238 - 3445792 - | hypothetical protein RPD_3102 3447702 - 3446710 - | helix-turn-helix, AraC type TERM 2761 3446813 - 3446783 - G 70 -11 -3.5594 | overlap 3446784 3446800 AAGGCACGGTGGAAA GCGCTGGGCTCGGC AAA GCCGAGGTCAGCGG CGATGTCGCCCACCG TERM 2762 3446812 - 3446784 - G 72 -14.5 -2.73243 | overlap 3446783 3446800 AGGCACGGTGGAAAG CGCTGGGCTCGGC AAA GCCGAGGTCAGCG GCGATGTCGCCCACC TERM 2763 3446978 - 3447007 + g 70 -9.9 -3.66178 | overlap 3446980 GTCTCGAAGTTCGGC CACGCTGTCGGCG GTCG CGCCCGCAGCGTA TTTCGGATTGCCGCA TERM 2764 3446980 - 3447005 + g 73 -12.5 -3.41222 | overlap 3446978 CTCGAAGTTCGGCCA CGCTGTCGGCG GTCG CGCCCGCAGCG TATTTCGGATTGCCG TERM 2765 3447216 - 3447187 - G 79 -7.1 -4.57569 | gap 1, overlap 3447189 CGACGCCCCGAAAAA CAGCCGATAGTCCG CCG CGAACT-CCGGCGG CCGGCAGGCGAAATC TERM 2766 3447214 - 3447189 - G 70 -8.3 -3.90316 | gap 1, overlap 3447187 ACGCCCCGAAAAACA GCCGATAGTCCG CCG CGAACT-CCGGC GGCCGGCAGGCGAAA TERM 2767 3448146 - 3448126 - g 74 -12.5 -3.54424 | opp_overlap 3448125, overlap 3448077 3448127 GCGCAGGGCGTCAAA CCCGGCGAC GTG GTCGCCGGC ATGTTGCCGCGGACG TERM 2768 3448145 - 3448127 - g 75 -16 -2.72511 | opp_overlap 3448125, overlap 3448077 3448126 CGCAGGGCGTCAAAC CCGGCGAC GTG GTCGCCGG CATGTTGCCGCGGAC RPD_3103 3447856 - 3449544 + | AMP-dependent synthetase and ligase RPD_3104 3449580 - 3450344 + | short-chain dehydrogenase/reductase SDR RPD_3105 3450390 - 3451577 + | Acetyl-CoA C-acetyltransferase TERM 2769 3451704 - 3451733 + G 73 -9.2 -3.89501 | opp_overlap 3451714, overlap 3451711 CACTCCTTCCCAAGG GCCGAACTGACC GAGATG GGCCAGCTCGGC TTTCTCGGCATGTTG RPD_3106 3451593 - 3452720 + | acyl-CoA dehydrogenase-like TERM 2770 3452891 - 3452852 - f 74 -9.9 -3.70773 | opp_overlap 3452852 3452879, overlap 3452853 CCGGAGATGCAATAA CCGCCTACCCGGACGCA GGAGAG CGCGTCCGGGCATCCGA GATTTGCAAGGAAGT RPD_3107 3453404 - 3455428 + | chemotaxis sensory transducer RPD_3108 3455611 - 3455961 + | hypothetical protein RPD_3109 3458687 - 3455982 - | multi-sensor signal transduction histidine kinase TERM 2771 3458814 - 3458773 - R 81 -13.7 -3.63991 | GACGATCGGCAACAA CGCCCATCGGCAAGGCTGC CGCG ACAGCACCACCGATGGACG ACTCACGAACCGCGA RPD_3110 3461082 - 3458902 - | Pyrrolo-quinoline quinone RPD_3111 3462032 - 3461238 - | NUDIX hydrolase RPD_3112 3462990 - 3462037 - | dihydrodipicolinate synthetase RPD_3113 3464019 - 3463159 - | MaoC-like dehydratase TERM 2772 3464089 - 3464057 - R 77 -13.4 -3.28712 | TTTCGGCGTTGATAA TTGCGCCCTCTCCC CTTGT GGGAGAGGGCTCCA CGCACGTTGCCCCAC TERM 2773 3464240 - 3464222 - R 81 -13.8 -3.63694 | opp_overlap 3464221 3464220 3464224, overlap 3464212 AGCCACCGTGAAGAA CGGCAGCG GCG CGCCGCCG TCGCTGGGTTTGAAC RPD_3114 3464596 - 3464204 - | hypothetical protein RPD_3115 3465744 - 3464596 - | acetyl-CoA acetyltransferase RPD_3116 3469433 - 3465948 - | indolepyruvate ferredoxin oxidoreductase TERM 2774 3466890 - 3466900 + g 72 -8.2 -4.08394 | overlap 3466889 AAACGCCGAATCCTT GCGC AGC GCGC TTTTCAGAACACTGT TERM 2775 3469469 - 3469484 + H 76 -8.2 -4.18488 | ACCGCGCAACCATTC GGCCGC TGGT GCGGTC TTTCTTGGAATCAGT TERM 2776 3469550 - 3469535 - H 74 -2.4 -4.91109 | GGCGCATCACAAAAA GCGGCA GTTT CGCAGC GTCCTGATCTTCGCA RPD_3117 3469758 - 3470189 + | hypothetical protein TERM 2777 3470218 - 3470245 + F 100 -15.6 -4.15044 | opp_overlap 3470219 3470221, overlap 3470219 3470221 TCGGCGGATCAGCGA ACAGCGGGTGCA GCAA TGCACCCGCTGC TTTGTTGCGCGCCCC TERM 2778 3470219 - 3470244 + F 91 -19.1 -3.08812 | opp_overlap 3470219 3470221, overlap 3470218 3470221 CGGCGGATCAGCGAA CAGCGGGTGCA GCAA TGCACCCGCTG CTTTGTTGCGCGCCC TERM 2779 3470244 - 3470219 - f 91 -19.1 -3.09516 | opp_overlap 3470219 3470218 3470221, overlap 3470221 CGGCGGATCAGCGAA CAGCGGGTGCA GCAA TGCACCCGCTG CTTTGTTGCGCGCCC TERM 2780 3470221 - 3470242 + F 81 -15.9 -3.10244 | opp_overlap 3470219 3470221, overlap 3470219 3470218 GCGGATCAGCGAACA GCGGGTGCA GCAA TGCACCCGC TGCTTTGTTGCGCGC TERM 2781 3470242 - 3470221 - f 81 -15.9 -3.10796 | opp_overlap 3470221 3470219 3470218, overlap 3470219 GCGGATCAGCGAACA GCGGGTGCA GCAA TGCACCCGC TGCTTTGTTGCGCGC RPD_3118 3470425 - 3470703 + | hypothetical protein TERM 2782 3470721 - 3470753 + T 83 -15 -3.53012 | gap 1, opp_overlap 3470729, overlap 3470729 GGATCGACCCGGCAT CGACGAAAGCCCCGC TCGC GCGGGGCTTTT-TCG TTTGCGACGCCGAGC TERM 2783 3470729 - 3470746 + T 100 -14.1 -4.98531 | opp_overlap 3470729, overlap 3470721 CCGGCATCGACGAAA GCCCCGC TCGC GCGGGGC TTTTTCGTTTGCGAC TERM 2784 3470746 - 3470729 - T 84 -14.1 -3.76224 | opp_overlap 3470729 3470721 CCGGCATCGACGAAA GCCCCGC TCGC GCGGGGC TTTTTCGTTTGCGAC RPD_3119 3471600 - 3470791 - | hypothetical protein RPD_3120 3472309 - 3471767 - | hypothetical protein TERM 2785 3471952 - 3471964 + g 71 -3.3 -4.65895 | GCTTGCCGCCCTCCT TGGCC CCG GGACA TTTTTCGATCCACGC RPD_3121 3473514 - 3472459 - | hypothetical protein TERM 2786 3473739 - 3473698 - R 95 -16.6 -3.91412 | gap 1, overlap 3473700 3473722 ACGACACGCCAGAAA TACCACACGCGCCGCTGCG GAAAA CGCAG-GGCGCGTGTGGGT CGGATCATCAAGAAA TERM 2787 3473737 - 3473700 - R 100 -23.6 -3.54447 | gap 1, overlap 3473698 3473722 GACACGCCAGAAATA CCACACGCGCCGCTGCG GAAAA CGCAG-GGCGCGTGTGG GTCGGATCATCAAGA TERM 2788 3473797 - 3473755 - R 73 -6.9 -4.2704 | gap 1, opp_overlap 3473782, overlap 3473766 CGGATCATCAAGAAA CAGCCGATCAATCCGCCCGG TGGT CCCGGCGGATCG-TAGGACG GCCTGTTACAGCGGC RPD_3122 3475335 - 3473803 - | carboxyl transferase RPD_3123 3475580 - 3476056 + | hypothetical protein RPD_3124 3476878 - 3476063 - | Beta-lactamase RPD_3125 3477211 - 3476945 - | type III secretion proteins, related to flagellar biosynthesis protein FlhB RPD_3126 3478989 - 3477208 - | hypothetical protein TERM 2789 3477830 - 3477871 + g 73 -13 -3.28791 | opp_overlap 3477864, overlap 3477867 TCGGTCTTGCCGACC CGCGC-GCCGCTGGTCGCCG GCAG CAGCGAC-AGCAGCAGCGCG TTGTCGAAGCCCGCT RPD_3127 3479834 - 3479049 - | ATP12 ATPase TERM 2790 3479755 - 3479780 + g 72 -13.3 -3.15544 | gap 1, opp_overlap 3479743 3479742 AACCGCTTCGGCAGC GCGGTGC-GCGT CGT GCGCCGCACCGC TTCCTCCGGATCGAG RPD_3128 3480281 - 3479907 - | hypothetical protein RPD_3129 3481612 - 3480278 - | pseudouridine synthase RluD TERM 2791 3481511 - 3481552 + g 86 -16.7 -3.54424 | gap 3 GTCCTCGCTGCGATT GCCGCGCA-CCGGACCGGCC TTCGC GGCCGG-CCGGCTGC-CGGC TTTGGGGCGATCGCC RPD_3130 3483510 - 3482974 - | transposase and inactivated derivatives TERM 2792 3483393 - 3483370 - G 70 -10.2 -3.71848 | gap 1 CGCGTCCAGGAAGAA CGGC-CGCTCG CGG CGCGCGAGCCG GAAAGCCGTCCGGAG RPD_3131 3484443 - 3483691 - | ABC transporter related TERM 2793 3483793 - 3483759 - G 72 -14.2 -3.03124 | CGGCACCGTCGAACA CGACCTCGCCGGTATC GAG GATCACGGCGCGGTCG GACAGTTCCAGCGCC RPD_3132 3485210 - 3484440 - | ABC transporter related RPD_3133 3486442 - 3485207 - | inner-membrane translocator RPD_3134 3487454 - 3486447 - | inner-membrane translocator TERM 2794 3487632 - 3487596 - R 81 -15.8 -3.09273 | overlap 3487592 CCCTCGCAAGACACA GCCGGCCGGCTGCGCC GCTGG GACGCAACCGACCGGA ATAGGAGTCAGGCCT RPD_3135 3489035 - 3487683 - | twin-arginine translocation pathway signal TERM 2795 3488982 - 3488952 - G 91 -16.8 -3.71848 | opp_overlap 3488977, overlap 3488926 3488923 3488953 GTCGCGGATGAAGAA CGTCGGCGTCGCCA GCG CGGCGACGCCGGCA AGCCCGGTCTTGAGC TERM 2796 3488981 - 3488953 - G 86 -18.1 -2.82895 | opp_overlap 3488977, overlap 3488926 3488923 3488952 TCGCGGATGAAGAAC GTCGGCGTCGCCA GCG CGGCGACGCCGGC AAGCCCGGTCTTGAG RPD_3136 3489845 - 3489408 - | histidine triad (HIT) protein TERM 2797 3490027 - 3490000 - H 100 -10.6 -5.78622 | overlap 3490002 TGACGGCAAAAAAAA CAGCCTTGGTAC ATCA GGACCAAGGCTA CAAGTCAAAGGGAGG TERM 2798 3490025 - 3490002 - H 95 -11 -4.53853 | overlap 3490000 ACGGCAAAAAAAACA GCCTTGGTAC ATCA GGACCAAGGC TACAAGTCAAAGGGA TERM 2799 3490754 - 3490727 - H 73 -2.8 -4.68994 | opp_overlap 3490721 3490747 ATCACCATTGAAAAA CGCTATCA TTTTTCCTATTT TGATAGCG TCGCAGTCATTTCAC RPD_3137 3490783 - 3491037 + | plasmid stabilization protein TERM 2800 3491370 - 3491418 + G 71 -14.7 -2.52464 | CCGACGGCTATATCG C-CGCGATCGC-CGCCGCGCACGGC TTC GCCGTG-GCGTCGCGCGA-CGCGAG TGCGTTCAACGCCGC RPD_3138 3491051 - 3491473 + | PilT protein-like TERM 2801 3491795 - 3491820 + T 93 -16.9 -3.51708 | gap 1, overlap 3491791 TCCGGCGATCACGCC CGGCGCCG-TCG ACA CGAACGGCGCCG TTAGTTTGCGAGATA RPD_3139 3494954 - 3491916 - | acriflavin resistance protein TERM 2802 3493197 - 3493176 - G 73 -3.6 -4.58395 | GCCATTGGCGAAAAA GCTTCCCG CATAAT CAGGCAGC GTCCGGAACAGCCGT TERM 2803 3493955 - 3494002 + g 81 -10.7 -4.13767 | opp_overlap 3493983 CCAGCAGGGCGTGTT GCA-CTTCTTCGATCGCGGCGTT GACG AACGTCGCGA-CGTCGAAGGTGC TTTTGACCTCCAAAC TERM 2804 3494114 - 3494148 + g 72 -4.3 -4.51238 | opp_overlap 3494115 3494117, overlap 3494117 GCGAGATCCCAATAA TGACGG-CGCGCTTGCC ATC GGCAAGTGAGATCG-CA TTTGTGTTTTGTCCG TERM 2805 3494886 - 3494868 - G 70 -5.9 -4.18494 | CACGGGCAGCGAAAA GACCGAG GCGAG CCCGGCC AGCAAAATCAGCGCG RPD_3140 3496036 - 3494954 - | secretion protein HlyD RPD_3141 3496142 - 3496621 + | redox-sensitive transcriptional activator SoxR RPD_3142 3497049 - 3496702 - | helix-turn-helix, HxlR type RPD_3143 3497123 - 3497503 + | hypothetical protein RPD_3144 3498038 - 3497619 - | hypothetical protein RPD_3145 3498132 - 3498380 + | hypothetical protein RPD_3146 3498606 - 3499169 + | cupin 2, barrel RPD_3147 3500078 - 3499206 - | LysR, substrate-binding TERM 2806 3500738 - 3500752 + G 72 -7.1 -4.1891 | overlap 3500700 GGCCGCGCGATCGTG CGCCA GCCGG TGGCG TTTCTGTTCGACGAG RPD_3148 3500237 - 3501391 + | ABC transporter related TERM 2807 3502044 - 3502002 - g 72 -11.9 -3.57792 | gap 1, overlap 3502003 GTATCGATCCCGAAA TCGCTCTA-CGACGCCGCCG AGAC CGACGGCGCCGGCAGCGCGT GGTCGCGGTTCCGGC TERM 2808 3502043 - 3502003 - g 75 -15.4 -2.74461 | gap 1, overlap 3502002 TATCGATCCCGAAAT CGCTCTA-CGACGCCGCCG AGAC CGACGGCGCCGGCAGCGCG TGGTCGCGGTTCCGG RPD_3149 3501384 - 3502331 + | binding-protein-dependent transport systems inner membrane component TERM 2809 3503081 - 3503106 + G 76 -6.2 -4.46212 | ATGGCGGCGGCACTG GTGATCATCA CCCCGC TGGTGATCGC TTTTCTACTCGCGCA RPD_3150 3502328 - 3503164 + | binding-protein-dependent transport systems inner membrane component TERM 2810 3504091 - 3504066 - g 74 -12.5 -3.54424 | gap 1, overlap 3504071 CCGGACGTGCTGAAA CCGAACGGCCGG CTG CCGGCCGG-CGG CAACGTGGTGCTGAT TERM 2811 3504087 - 3504071 - g 78 -15.1 -3.27525 | overlap 3504066 CGTGCTGAAACCGAA CGGCCGG CTG CCGGCCG GCGGCAACGTGGTGC RPD_3151 3503196 - 3504476 + | extracellular solute-binding protein TERM 2812 3504492 - 3504515 + F 100 -19.6 -4.64861 | opp_overlap 3504487 3504484 CACGCAACGATGTGA GCGGAGCGGG CCAG CCCGCTCCGC TTTCTTTTCACGAGG TERM 2813 3504898 - 3504926 + G 74 -12.4 -3.61715 | gap 1, overlap 3504899 GTTTTTCGCGTTACT TCC-CCGGCGTCG CGCG CGACGCCGGCGGC TTCTTCCAGACCATG TERM 2814 3504899 - 3504925 + G 75 -15.9 -2.76815 | gap 1, overlap 3504898 TTTTTCGCGTTACTT CC-CCGGCGTCG CGCG CGACGCCGGCGG CTTCTTCCAGACCAT RPD_3152 3504630 - 3505454 + | metallophosphoesterase TERM 2815 3505465 - 3505488 + T 83 -14.6 -3.4052 | gap 1, opp_overlap 3505465 TCTGAGACCTCACAA CGACGGCCGGG TTC CCCGGC-GTCG TTACTTGCATTGCGC TERM 2816 3505488 - 3505465 - T 82 -14.6 -3.34962 | gap 1, opp_overlap 3505465 TCTGAGACCTCACAA CGACGGCCGGG TTC CCCGGC-GTCG TTACTTGCATTGCGC RPD_3153 3506244 - 3505489 - | tetratricopeptide TPR_2 RPD_3154 3506429 - 3507106 + | nitroreductase TERM 2817 3507203 - 3507182 - T 82 -14.5 -3.32844 | overlap 3507134 TGCGTGATCGTAGAA CCCGGAATC TCGA GATTCCGGG TTCGCATGCCTGCGG RPD_3155 3508651 - 3507320 - | recombination factor protein RarA TERM 2818 3508595 - 3508542 - G 75 -15.7 -2.78384 | gap 1 TCCTGGCCGACGACA TCGCCCAGCGCGCGCGGCCGCAGCCG GTC CGGCAGCGGACGCG-GCGCGTCGCGC TCGAGGCCGGCGGCG TERM 2819 3508740 - 3508694 - R 100 -26 -4.07568 | opp_overlap 3508724 GCTCGCCCGGCAAAA CGAGCCTCGAAGGATGGCCGCG CAT CGTGAGCATCCTTCGAGGCTCG GGCTGCGCCCTCGCA RPD_3156 3510231 - 3508837 - | peptidase S1C, Do TERM 2820 3509061 - 3509084 + g 74 -14.6 -3.06315 | TCGGGTCGAGCCGCA TCTCGTCGGC GATC GCCGGCGAGA TGTTGGCGATCTTGG TERM 2821 3509776 - 3509790 + g 79 -4.2 -4.91873 | opp_overlap 3509776 ATCGGAATTCGAAAG TTCGAG CGT CGCGAA TTTTTCCTTGGTATC RPD_3157 3510728 - 3510336 - | helix-turn-helix, HxlR type RPD_3158 3510848 - 3511864 + | alcohol dehydrogenase GroES-like protein TERM 2822 3512099 - 3512119 + T 100 -16.1 -4.11216 | opp_overlap 3512099, overlap 3512108 3512112 GCCGGCAACAAAAAA GGCGGCGCT TGC GGCGCCGCC TTTTGAAACTCAAAC TERM 2823 3512119 - 3512099 - T 100 -15.4 -5.4505 | opp_overlap 3512099 3512108 3512112 GCCGGCAACAAAAAA GGCGGCGC TTGCG GCGCCGCC TTTTGAAACTCAAAC rplQ 3512558 - 3512148 - | 50S ribosomal protein L17 TERM 2824 3512666 - 3512635 - R 71 -13.8 -2.52464 | opp_overlap 3512633 3512631 3512628 3512627, overlap 3512638 3512639 TTCGCCCGGAAGCGA GAACGGCGAACAGC CTCA GCTATTCGCCATCC CCTCTTCGTTCTCAG TERM 2825 3512663 - 3512638 - R 74 -11.9 -3.41878 | opp_overlap 3512633 3512631 3512628 3512627, overlap 3512635 3512639 GCCCGGAAGCGAGAA CGGCGAACAGC CTCA GCTATTCGCCA TCCCCTCTTCGTTCT RPD_3160 3513697 - 3512678 - | DNA-directed RNA polymerase subunit alpha TERM 2826 3513828 - 3513794 - R 100 -19.2 -3.74224 | overlap 3513795 GCCAAAGTATCGAAA GCCGTCGCGGGCGGCC TGG GGCCACCCGCGATGGA AAAATCACACCCGGC TERM 2827 3513827 - 3513795 - R 100 -22.7 -2.84053 | overlap 3513794 CCAAAGTATCGAAAG CCGTCGCGGGCGGCC TGG GGCCACCCGCGATGG AAAAATCACACCCGG TERM 2828 3513866 - 3513833 - R 72 -4.3 -4.65895 | opp_overlap 3513833 3513844, overlap 3513836 3513838 CCCGCGATGGAAAAA TCACACCCGGCGGCG CTTG CGCGGCCGGCAGCCA TTGTGCGGGATGGTG RPD_3161 3514222 - 3513833 - | 30S ribosomal protein S11 TERM 2829 3514338 - 3514280 - R 100 -11.1 -5.14563 | gap 1, opp_overlap 3514286, overlap 3514293 GGCTCCACCAAAAAA CGAATGGCGAAAAGTGCGTCGCGAATAG AGCC CTATTCGCCACGCACCATCCGCTGTTC- GCAAAATTACTTCTT TERM 2830 3514286 - 3514333 + r 81 -15.6 -3.03159 | opp_overlap 3514280 3514293 ACCAAAAAACGAATG GCGAAAAGTGCGTCGCGAATAG AGCC CTATTCGCCACGCACCATCCGC TGTTCGCAAAATTAC TERM 2831 3514326 - 3514293 - R 100 -18.3 -4.15508 | opp_overlap 3514286, overlap 3514280 AACGAATGGCGAAAA GTGCGTCGCGAATAG AGCC CTATTCGCCACGCAC CATCCGCTGTTCGCA rpsM 3514713 - 3514345 - | 30S ribosomal protein S13 adk 3515984 - 3514902 - | adenylate kinase TERM 2832 3515107 - 3515124 + g 73 -4 -4.62904 | CCAGTCGCCTTTTTG GCCGGC GCCTTA GCGGGC TTTTTAGCAGTCTTT TERM 2833 3515175 - 3515190 + g 71 -3.2 -4.62471 | overlap 3515173 CTTCACACCGGCTGC GGCC TTCTTGGC GGCC TTTTTGGCGGTTACG TERM 2834 3515364 - 3515382 + g 79 -3 -4.98255 | CACCGAACGCTTGGC GGCGGC GGTCTTG GCGGCC TTTTTGTCGTTGGCC TERM 2835 3515528 - 3515556 + g 73 -12.4 -3.40403 | TCTGGGCACGGTAGG CGCTGAGTCGCT TCGAC AGCGCCTCGGCG TTGTCGTCGGCGCGC secY 3517312 - 3515981 - | preprotein translocase subunit SecY TERM 2836 3516866 - 3516848 - G 74 -10.2 -3.76482 | CGACAGCAGGAAGAA GGCGCCGG GCT CCGACACC ACGTTGCCGGCGCCC rplO 3517947 - 3517462 - | 50S ribosomal protein L15 rpmD 3518154 - 3517960 - | 50S ribosomal protein L30 TERM 2837 3518187 - 3518210 + r 73 -11 -3.61398 | GCGTCTTGTCTCTGT CAGCGTGATC CCGC GATCACGCCG TTATTCGGCAACCAC rpsE 3518786 - 3518211 - | 30S ribosomal protein S5 rplR 3519211 - 3518849 - | 50S ribosomal protein L18 TERM 2838 3518996 - 3519035 + g 71 -12.8 -3.28712 | gap 1, overlap 3518992 GACCGCCTTGGCCGC GTCGATGTTCG-CGCCGGT GTT GCCGGCGTCGCGCAGCGAC TTCTCCAGCGACGAA rplF 3519756 - 3519223 - | 50S ribosomal protein L6 rpsH 3520268 - 3519870 - | 30S ribosomal protein S8 rpsN 3520586 - 3520281 - | 30S ribosomal protein S14 rplE 3521187 - 3520630 - | 50S ribosomal protein L5 rplX 3521494 - 3521180 - | 50S ribosomal protein L24 rplN 3521862 - 3521494 - | 50S ribosomal protein L14 rpsQ 3522171 - 3521923 - | 30S ribosomal protein S17 RPD_3176 3522392 - 3522183 - | 50S ribosomal protein L29 rplP 3522816 - 3522403 - | 50S ribosomal protein L16 rpsC 3523548 - 3522850 - | 30S ribosomal protein S3 rplV 3523958 - 3523572 - | 50S ribosomal protein L22 rpsS 3524247 - 3523969 - | 30S ribosomal protein S19 rplB 3525095 - 3524259 - | 50S ribosomal protein L2 rplW 3525408 - 3525109 - | 50S ribosomal protein L23 rplD 3526025 - 3525405 - | 50S ribosomal protein L4 TERM 2839 3525809 - 3525825 + g 72 -11.5 -3.57039 | GTTGCGAACCGTGAC GGGCGCC ACC GGTGCCC TTCTGCTTGTACATC rplC 3526752 - 3526027 - | 50S ribosomal protein L3 rpsJ 3527110 - 3526802 - | 30S ribosomal protein S10 TERM 2840 3527188 - 3527137 - R 71 -13 -3.07816 | opp_overlap 3527139 3527144 TCTTCAGTGAGCCAA TGGTGAGTAGTGAGTGGCGAACGA ACCT CCGTCCGCCACTCTCTATTCGCTA TTCGCCTTACTCGAT TERM 2841 3527139 - 3527186 + r 88 -17.1 -3.10464 | opp_overlap 3527137, overlap 3527144 TTCAGTGAGCCAATG GTGAGTAGTGAGTGGCGAACG AACCTC CGTCCGCCACTCTCTATTCGC TATTCGCCTTACTCG TERM 2842 3527144 - 3527181 + r 80 -14.2 -3.19293 | opp_overlap 3527137, overlap 3527139 TGAGCCAATGGTGAG TAGTGAGTGGCGAACG AACCTC CGTCCGCCACTCTCTA TTCGCTATTCGCCTT RPD_3186 3528385 - 3527195 - | elongation factor Tu TERM 2843 3528160 - 3528215 + g 70 -10.3 -3.65812 | gap 1, overlap 3528211 CGACATGCGCGTAGT GGCGATTGGTCGTCTCGTACTCGACG TGAGC CGTCGAGATCGTGATG-CCACGCGCC TTCTCTTCCGGCGCC RPD_3187 3530497 - 3528425 - | elongation factor G RPD_3188 3530998 - 3530528 - | 30S ribosomal protein S7 rpsL 3531385 - 3531014 - | 30S ribosomal protein S12 TERM 2844 3531901 - 3531883 - H 72 -2.2 -4.71223 | opp_overlap 3531885, overlap 3531884 3531885 CGATAATATACAAAA TGCCCGCC ATA AGCGGGTT TTCGTGAGGTCACGC TERM 2845 3531885 - 3531899 + H 79 -8.5 -4.26903 | opp_overlap 3531885 3531884 3531883 ATAATATACAAAATG CCCGC CATAA GCGGG TTTTCGTGAGGTCAC TERM 2846 3532510 - 3532540 + G 79 -11.8 -3.84451 | gap 1, opp_overlap 3532500 3532501, overlap 3532528 AGCAAGCGTCCGGCG CGCGC-GCGCCGC GCATTG GCGTCGCAGCGCG TTTCGCTTTGGCGAC TERM 2847 3532528 - 3532557 + G 79 -10.7 -4.0098 | gap 1, overlap 3532510 GCGCGCCGCGCATTG GCGTCG-CAGCGCG TTT CGCTTTGGCGACGC TTGTTTCGCTTCAAC TERM 2848 3533126 - 3533156 + G 75 -6.7 -4.42386 | GGATTTCGCGTCACT GCGGCCGAACTGG GTCGG CTGGCTCGGCGGC TTTTATCAGTGGGAG RPD_3190 3532458 - 3533399 + | hypothetical protein RPD_3191 3534749 - 3533535 - | hypothetical protein RPD_3192 3537016 - 3534911 - | ABC transporter related TERM 2849 3537096 - 3537072 - R 93 -17.9 -3.27774 | opp_overlap 3537070 3537060 GACCGCAATGACGAA CGCCGTGACTC GTC GAGCCACGGCG CATCCTATAGCGTTT TERM 2850 3537159 - 3537202 + r 100 -22.8 -2.85351 | gap 1, opp_overlap 3537159 3537160 3537163, overlap 3537160 AAACGCGTCAGAAAA G-TTAGAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTCTGAGC TATCATCTCGGGGCC TERM 2851 3537201 - 3537159 - R 100 -20.8 -4.39002 | opp_overlap 3537159 3537160, overlap 3537160 3537163 AAACGCGTCAGAAAA GTTAGAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTCTGAG CTATCATCTCGGGGC TERM 2852 3537200 - 3537160 - R 100 -24.3 -3.22678 | opp_overlap 3537160 3537159, overlap 3537159 3537163 AACGCGTCAGAAAAG TTAGAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTCTGA GCTATCATCTCGGGG TERM 2853 3537197 - 3537163 - R 100 -26 -2.80077 | opp_overlap 3537160 3537159, overlap 3537160 3537159 GCGTCAGAAAAGTTA GAGCTCCGGTTCTGAT TCT ATCAGAACCGGAGCTC TGAGCTATCATCTCG RPD_3193 3539297 - 3537228 - | methyltransferase type 11 TERM 2854 3539546 - 3539563 + r 100 -14.1 -4.25676 | opp_overlap 3539546 ATTTGGCATGAAAAA GGCCGGC TTTC GCCGGCC TTTTCAGGTTTGCTT TERM 2855 3539563 - 3539546 - R 100 -14.1 -4.7254 | opp_overlap 3539546 ATTTGGCATGAAAAA GGCCGGC TTTC GCCGGCC TTTTCAGGTTTGCTT RPD_3194 3543794 - 3539592 - | DNA-directed RNA polymerase subunit beta' TERM 2856 3541087 - 3541116 + g 74 -12.8 -3.54424 | CCGTGGTTGACCGGC GTGCCGCGGGCG AGATCG CGCCCGTAGCAC TTTCCGCAGATGCCG TERM 2857 3541658 - 3541693 + g 73 -9.1 -3.97444 | gap 2 TCGAGTTGACCTGGC TCTCCGC-G-CCCGAAG CATT CTTCCGGACCGCGGAGA TTTCCTTCATCATCT TERM 2858 3542845 - 3542901 + g 73 -6.4 -4.41494 | gap 2, overlap 3542848 TTGGCGCCGGTGATG ACGCG-GCCGC-GGCGGCCGTTGTCG AACAGCG CGTCGACGGCCTCCTGCAGCATGCGC TTTTCGTTGCGGATG TERM 2859 3542848 - 3542862 + g 71 -12.8 -3.28712 | overlap 3542845 GCGCCGGTGATGACG CGGCCG CGG CGGCCG TTGTCGAACAGCGCG TERM 2860 3543178 - 3543199 + g 70 -10.1 -3.65542 | overlap 3543176 TCGGTCTCGGCCATC TCGACGCGC AGCT GCGCATCGA TCTTTTCGAGCTCGA TERM 2861 3543881 - 3543937 + r 74 -12.9 -3.39449 | opp_overlap 3543909, overlap 3543865 3543923 CATCGCGCCTGCGCG GCG-GGGGCCCGGCCGGTTCGCGCGAA GATCA TTCGCGCGTCCCG-CCGGGCATGACGC TTGGTGTTACTCGGC rpoB 3548068 - 3543944 - | DNA-directed RNA polymerase subunit beta TERM 2862 3548253 - 3548220 - R 95 -13.1 -4.27584 | gap 1, overlap 3548221 ATTCCGAACGCAAAA CGACGTGCGGG-GCGC TAG ACGCACCCGCCCGTCA AAACCATCTCGTCAC TERM 2863 3548252 - 3548221 - R 80 -14.4 -3.16068 | gap 1, overlap 3548220 TTCCGAACGCAAAAC GACGTGCGGG-GCGC TAG ACGCACCCGCCCGTC AAAACCATCTCGTCA rplL 3548914 - 3548543 - | 50S ribosomal protein L7/L12 TERM 2864 3548808 - 3548828 + g 75 -4.6 -4.63218 | gap 1, overlap 3548807 3548811 GCAACGGCCACGGCT GCGGCGGCG GACA CGCC-CCAC TTTTCTTCGAGGAGC rplJ 3549488 - 3548970 - | 50S ribosomal protein L10 TERM 2865 3549412 - 3549467 + g 95 -5.2 -5.42862 | gap 1, opp_overlap 3549410 3549412, overlap 3549414 3549416 AGGCCGGAATAATGA GCGACGACCGCGACGCTGG-TGGTCTG GAA CAGACCATTCAGCGATTCGACCGCCTC TTTTTTTGCCGCTCT TERM 2866 3549414 - 3549465 + g 73 -6.4 -4.35085 | gap 1, opp_overlap 3549410 3549412, overlap 3549412 3549416 GCCGGAATAATGAGC GACGACCGCGACGCTGG-TGGTCTG GAA CAGACCATTCAGCGATTCGACCGCC TCTTTTTTTGCCGCT RPD_3199 3551158 - 3550208 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2867 3550284 - 3550250 - G 81 -3.5 -5.00616 | gap 1, overlap 3550251 3550252 CTTGCCTGCAAAAAA CGCCGCCAGATTGGCG ATCA CGC-AATCCTGCATCG CCACATGGGCTTCCA TERM 2868 3551202 - 3551236 + r 73 -11.3 -3.65529 | opp_overlap 3551205, overlap 3551163 3551205 TTTGGAAGCAAAAAC AAAGGGGCGGACGGG TTTGC CCCATCCGCCCCTGG TTTGCCTCAACGTCT TERM 2869 3551205 - 3551233 + r 87 -17.4 -2.94144 | opp_overlap 3551205, overlap 3551163 3551202 GGAAGCAAAAACAAA GGGGCGGACGGG TTTGC CCCATCCGCCCC TGGTTTGCCTCAACG TERM 2870 3551233 - 3551205 - R 100 -19.6 -4.96773 | opp_overlap 3551163 3551205 3551202 GGAAGCAAAAACAAA GGGGCGGACGGG TTTGC CCCATCCGCCCC TGGTTTGCCTCAACG rplA 3551960 - 3551271 - | 50S ribosomal protein L1 rplK 3552394 - 3551966 - | 50S ribosomal protein L11 nusG 3553217 - 3552687 - | transcription antitermination protein NusG TERM 2871 3553273 - 3553252 - R 73 -13.1 -3.21595 | overlap 3553239 AACGCCGAGCACGAA GGTGATCAG AACC CTGATCACC TGGTCGGCGACGAAG secE 3553422 - 3553234 - | preprotein translocase subunit SecE TERM 2872 3554186 - 3554143 - R 100 -19.7 -4.07687 | gap 2, opp_overlap 3554183, overlap 3554149 ACCCTGCCCCGAAAA GCAGAAGGGCCGCGAGCGCGA CAAT TTGCGCTCGCGGCCCT-C-GC ATTGCGGTGGCGATG TERM 2873 3554182 - 3554149 - R 100 -23.9 -3.68359 | overlap 3554143 CCCCGAAAAGCAGAA GGGCCGCGAGCGCGA CAAT TTGCGCTCGCGGCCC TCGCATTGCGGTGGC RPD_3204 3555396 - 3554206 - | elongation factor Tu TERM 2874 3555171 - 3555226 + g 70 -10.3 -3.65812 | gap 1, overlap 3555222 CGACATGCGCGTAGT GGCGATTGGACGTCTCGTACTCGACG TGAGC CGTCGAGATCGTGATG-CCACGCGCC TTCTCTTCCGGCGCC TERM 2875 3556572 - 3556596 + G 72 -11.4 -3.59979 | gap 1 CAACTACATCCTGCC GCCGGGCCACG GCTT CG-GGCTCGGC TTTGCGGTGCGCACC RPD_3205 3555571 - 3556794 + | beta-lactamase TERM 2876 3556930 - 3556879 - T 77 -13.6 -3.28712 | gap 1, opp_overlap 3556882 CGCTCCCCCCCACAA CTTCGGGATTCCGGGTCTGCGCGCC AGC GGCGCGCAT-CCCGGAATGACGTTG CGTGGCGAGGAGGAA TERM 2877 3556882 - 3556927 + T 90 -18.3 -3.05384 | gap 1, opp_overlap 3556879 TCCCCCCCACAACTT CGGGATTCCGGGTCTGCGCGCC AGC GGCGCGCAT-CCCGGAATGACG TTGCGTGGCGAGGAG RPD_3206 3557717 - 3556950 - | short-chain dehydrogenase/reductase SDR RPD_3207 3558594 - 3557839 - | phosphoglycerate mutase TERM 2878 3559411 - 3559373 - g 74 -5.1 -4.4767 | gap 1, overlap 3559374 GCACCGACCACAAAA TCGGCCAGCTCAACCCGC TGAA GCGCGCCG-GCCAGCCGC ACGAACTCGCCACCA RPD_3208 3558748 - 3559533 + | short-chain dehydrogenase/reductase SDR TERM 2879 3559611 - 3559633 + T 71 -11.3 -3.53343 | gap 1, opp_overlap 3559611 3559602, overlap 3559622 3559623 AAATGATTGCAGACA TGCGCTCGCG TTTC CGCG-GCGCA TTTGCGCCCGGGCTT TERM 2880 3560202 - 3560179 - T 100 -16 -4.60797 | opp_overlap 3560176 3560174 CGCTGACAGACAAAA GGCGCGATCC TTGC GGACCGCGCC TCCATGTTCGTCTCC RPD_3209 3561402 - 3560227 - | aminoglycoside phosphotransferase TERM 2881 3561376 - 3561406 + g 100 -21.2 -4.42238 | overlap 3561377 CCGCGCGTTGCTGAC ACTGATGCCCGGGC GCG GCCCGGGCATCAGG TTTTCCTTCAGATGG TERM 2882 3561377 - 3561405 + g 100 -24.7 -3.2486 | overlap 3561376 CGCGCGTTGCTGACA CTGATGCCCGGGC GCG GCCCGGGCATCAG GTTTTCCTTCAGATG RPD_3210 3562710 - 3561472 - | acyl-CoA dehydrogenase-like RPD_3211 3562954 - 3563619 + | regulatory protein, TetR TERM 2883 3564158 - 3564137 - g 70 -3.5 -4.43844 | opp_overlap 3564154, overlap 3564138 CGATCACCGAGAAAA CCGGGGTCA ATTC CGTCCTCGG CGTCGCGCCCGCGAC TERM 2884 3564426 - 3564396 - g 70 -11.8 -3.43217 | opp_overlap 3564403 3564404 GAGCAAGATCGACAA GCTGAAGACCGCGA CCG CCGCGGATTTCAGC GCGACCTTCATCGAC RPD_3212 3564061 - 3564621 + | hypothetical protein TERM 2885 3564644 - 3564674 + F 100 -20.5 -3.66178 | gap 1 TTCTTTCACGACCGA CGGCCCGGACCGCC ACGC GGCG-TCCGGGCCG TTTGCCGTTCCGGCA TERM 2886 3566834 - 3566824 - g 79 -8.2 -4.36914 | overlap 3566825 3566826 GCCGCGCGCAGAAAA GCGG CAT CCGC CGGCACGCCGAGGAC RPD_3213 3564858 - 3567044 + | glycogen debranching protein GlgX TERM 2887 3567072 - 3567120 + F 88 -14.8 -3.73088 | overlap 3567061 3567074 CGTTTGCCGCACATT TG-CGCATCCGTTCAGTCGGTTAC GGA GGAACCGACTGAACGG-TCCGTCA TTGTTGATGACATAT TERM 2888 3567074 - 3567117 + F 87 -17.6 -2.96249 | gap 1, overlap 3567061 3567072 TTTGCCGCACATTTG CGCATCCGTTCAGTCGGTTAC GGA GGAACCGACTGAACGG-TCCG TCATTGTTGATGACA TERM 2889 3567287 - 3567314 + G 73 -14.2 -3.16668 | gap 1, opp_overlap 3567283 3567281 CGAACACAAGATCCG GTT-CGCGCCGGA CGT TCCGGCGCGCGAC TTCGTCGACATGTTC RPD_3214 3567168 - 3568019 + | transglutaminase-like TERM 2890 3568056 - 3568077 + T 89 -13 -4.1891 | GTGGCTGAACGCGAA TGCCCGGC CCTTGC GCCGGGCA TTTCTGTTGCCGAGG TERM 2891 3568136 - 3568114 - T 71 -8.3 -3.889 | opp_overlap 3568132, overlap 3568107 3568115 TGGAAGCAGACGAAA GCGCCCGGG ACGAG CCCGAGCGA ATCGCATCATTCATC RPD_3215 3568367 - 3568155 - | hypothetical protein RPD_3216 3568519 - 3568926 + | hypothetical protein TERM 2892 3568945 - 3568976 + T 73 -13 -3.14132 | overlap 3568927 AGGCGCGCAGCCCTA TCGGCGCCTTCGGT TCTG ATCGAGGCCGCCGA TTCCTAAGAAACGGC RPD_3217 3570468 - 3569305 - | peptidase S1 and S6, chymotrypsin/Hap TERM 2893 3570611 - 3570638 + r 74 -14 -2.91264 | GCGATGGATGCGGCC GCCCCAGCCCCC GTGA GGGGGCCGGAGC TATCTCAGTCGCGAA RPD_3218 3572718 - 3570643 - | DEAD/DEAH box helicase-like TERM 2894 3572538 - 3572518 - G 85 -10.4 -4.25104 | GGCGGCGGATGAAAA CCGCTCGG AATCG CCGAGCAG GTCACGGGCGATCGC TERM 2895 3572953 - 3572992 + H 100 -17.8 -3.58726 | gap 1, opp_overlap 3572951 3572950 CGCAGTCATGAAGGT GCCCGCG-TCCGGTCCGCC GCT GGCGCGCCGGAGCGCGCGC TTCTATATCGGGAAC RPD_3219 3573047 - 3573718 + | peptidase M50 TERM 2896 3573947 - 3573931 - f 70 -12.3 -3.17075 | CCCCCCCGAATTGAA CGCGTAC GCG GTACGCG TGGCCGAACGCGTCG TERM 2897 3574427 - 3574463 + F 79 -13.8 -3.53091 | gap 1, opp_overlap 3574426 3574427 GGCGTCTGGCAGAAT TTCCGCG-TTCGATCCG GTCT CGGGTCGGATCGCGGGA TTTGACGGAGCAGCT RPD_3220 3574794 - 3574985 + | hypothetical protein TERM 2898 3575753 - 3575807 + G 83 -8.5 -4.58395 | gap 1, opp_overlap 3575752 3575751 3575759 AGAATCCGAAGAACC TCAAGATCGTCGAGCTCGACGCGGCG CAAC TGCCGCG-CTCGCTGAACGATCTCGA TTTTTCGGCGGTGAA RPD_3221 3575248 - 3576030 + | NLPA lipoprotein TERM 2899 3576098 - 3576075 - f 74 -13.8 -2.94925 | opp_overlap 3576073 3576072 3576076, overlap 3576049 ACATCTCACGACAGA CGCGACCGGC TTCG GCCGGTCGCT GCATTTCAGGACAGG TERM 2900 3576076 - 3576097 + F 83 -17.3 -2.64155 | opp_overlap 3576049 3576075, overlap 3576073 3576072 CATCTCACGACAGAC GCGACCGGC TTCG GCCGGTCGC TGCATTTCAGGACAG TERM 2901 3576587 - 3576619 + G 100 -19.9 -3.14132 | opp_overlap 3576603 TCGGCGGCCCCTGCG TGCTCGGCGCGCAGA AGC TCGGCGCGCTGAGCA TTCATGCCGGCACCC TERM 2902 3577444 - 3577391 - g 91 -17.3 -3.71649 | gap 1 TGCTCAAACCCGAAA CGCTGCCGCGAGCGACCCACAAGGCG AAG CGCGTCGAGGACCGC-CGCAGCGGCG TGTGGAGCTAAAGGC RPD_3222 3576118 - 3577455 + | phenylacetate--CoA ligase RPD_3223 3578508 - 3577735 - | lipoprotein YaeC RPD_3224 3579206 - 3578541 - | binding-protein-dependent transport systems inner membrane component RPD_3225 3580344 - 3579196 - | ABC transporter related TERM 2903 3579969 - 3580025 + g 77 -13.1 -3.59315 | gap 4, opp_overlap 3579963 3579972, overlap 3579970 3579972 3580011 GATTGAAATGCTGGA ACACCATGC-CGATCGAG-CGGCGC-GCG CGG CGCAGCGCCGGCTCG-TCGAGCGAGGTGA TTTCGACGTCATTGA TERM 2904 3579970 - 3580024 + g 77 -16.6 -2.75268 | gap 4, opp_overlap 3579963 3579972, overlap 3579969 3579972 3580011 ATTGAAATGCTGGAA CACCATGC-CGATCGAG-CGGCGC-GCG CGG CGCAGCGCCGGCTCG-TCGAGCGAGGTG ATTTCGACGTCATTG RPD_3226 3581443 - 3580493 - | Serine O-acetyltransferase TERM 2905 3581295 - 3581250 - G 72 -11.8 -3.53012 | gap 1 CCCGCCGGGCCGAAA TGGCGCGGATACAACGCCGCG ACCAG CGCGTCGACG-ATCCCCGCCA CCGCTTCGCGCGAGG RPD_3227 3583438 - 3581450 - | SufS subfamily cysteine desulfurase TERM 2906 3582054 - 3582030 - G 84 -12.9 -3.90328 | GAGAAGGCGTAGAAA TCGACGTCCAG CGC CTGCACGTCGA CCGGCATATGACAGA TERM 2907 3582250 - 3582272 + g 71 -12.7 -3.28712 | gap 1 CGTGATCGTCGACCG GGGCGACGCG CAGC CGCG-CGCCC TTCTCGGCCGCGAGC TERM 2908 3582859 - 3582825 - G 78 -6.2 -4.63218 | opp_overlap 3582856, overlap 3582827 TTGCCGGCAAGAAAA TACAGCGGCTCCGACG CGC CGGCGAAGCTGCCGCC GAACGGTCCGGCGTT TERM 2909 3582857 - 3582827 - G 79 -11 -3.93367 | opp_overlap 3582856, overlap 3582825 GCCGGCAAGAAAATA CAGCGGCTCCGACG CGC CGGCGAAGCTGCCG CCGAACGGTCCGGCG TERM 2910 3583008 - 3582956 - G 72 -11.7 -3.57144 | GGTGTCACGCGTAAA TGACGGCGCCGACGGCGGCGATGGC TGC GCCGGCGGCGCGACCGGAGTCGTCA CCAGCGGCACGGTCA TERM 2911 3583265 - 3583223 - G 100 -19.9 -3.14132 | overlap 3583225 CGGTTCGGCCACGAA CAGCGGCGCC-GAGCCGAGCG CCG CGCCCGGCTCCGGCGCCGG-G CCGTTCGGCAAAGCC TERM 2912 3583264 - 3583225 - G 100 -23.6 -3.13403 | gap 1, overlap 3583223 GTTCGGCCACGAACA GCGGCGCC-GAGCCGAGCG CCG CGCCCGGCTCCGGCGCCGG GCCGTTCGGCAAAGC RPD_3228 3584369 - 3583425 - | hypothetical protein TERM 2913 3585605 - 3585632 + G 82 -11.4 -4.11371 | overlap 3585569 3585587 CGCGGTCAGCGCCGG CATGATCTCGAT CTTC ATCGGGATCGTG TTTTCGGGGCTGTTC RPD_3229 3585090 - 3585683 + | hypothetical protein RPD_3230 3586165 - 3586986 + | RNA methyltransferase TrmH, group 3 TERM 2914 3587064 - 3587027 - T 81 -14.1 -3.53811 | opp_overlap 3587030 3587032, overlap 3587032 CCGAGCCTTTGGAAA TCGAACGCCCGCCCGCA TCGC TGCGGACGGGCGTCTTA CTTGATCGCGTATCC TERM 2915 3587030 - 3587061 + T 85 -15.8 -3.40371 | opp_overlap 3587027 3587032, overlap 3587032 AGCCTTTGGAAATCG AACGCCCGCCCGCA TCGC TGCGGACGGGCGTC TTACTTGATCGCGTA TERM 2916 3587032 - 3587059 + T 93 -18.4 -3.27029 | opp_overlap 3587027 3587032, overlap 3587030 CCTTTGGAAATCGAA CGCCCGCCCGCA TCGC TGCGGACGGGCG TCTTACTTGATCGCG TERM 2917 3587059 - 3587032 - T 95 -20.6 -3.27525 | opp_overlap 3587032 3587030, overlap 3587027 CCTTTGGAAATCGAA CGCCCGCCCGCA TCGC TGCGGACGGGCG TCTTACTTGATCGCG TERM 2918 3587171 - 3587130 - T 93 -18.1 -3.29471 | gap 1 GCCTCACCACAGCAA TCCGGGCCACCGGGTTCCGA CGG TCGGAACCCAGCG-CCAGGA TCGATGGCGATCAGT RPD_3231 3587724 - 3587182 - | hypothetical protein RPD_3232 3588275 - 3587796 - | hypothetical protein RPD_3233 3589311 - 3589204 - | hypothetical protein TERM 2919 3589444 - 3589426 - R 100 -13.1 -4.72272 | opp_overlap 3589426 CCCGCCCAGCAAAAA GGCCGGC GCGAG GCCGGCC TTGGGTCTTCGGGAG TERM 2920 3589426 - 3589444 + r 73 -13.1 -3.1855 | opp_overlap 3589426 CCCGCCCAGCAAAAA GGCCGGC GCGAG GCCGGCC TTGGGTCTTCGGGAG RPD_3234 3590183 - 3589470 - | putative outer membrane protein TERM 2921 3590166 - 3590153 - G 73 -3.7 -4.62069 | CCGTGAGCGCAAAAA CTGCG GCTG CGCTG AGCAGATACTTCTTC RPD_3235 3590795 - 3590358 - | hypothetical protein TERM 2922 3590969 - 3590924 - H 81 -13.9 -3.66178 | overlap 3590905 3590925 3590962 GCGGCGAATTTGAAA CCGCGGCGCCGCCTCGTCCGT ATCG AGGGATGAGGCAACGCGGCGA ACGGCGCCAGGCGGC TERM 2923 3590968 - 3590925 - H 78 -15.2 -2.79492 | overlap 3590905 3590924 3590962 CGGCGAATTTGAAAC CGCGGCGCCGCCTCGTCCGT ATCG AGGGATGAGGCAACGCGGCG AACGGCGCCAGGCGG TERM 2924 3591021 - 3591031 + H 73 -8.2 -4.07687 | CGGTGTTTTCAGCAG GGCC GAC GGCC TTTTGCAGCGGGCCT RPD_3236 3591103 - 3591639 + | TPR repeat-containing protein TERM 2925 3592313 - 3592361 + G 71 -12.5 -3.23216 | gap 2, opp_overlap 3592359 GCTGACGCCGATCTC GGCGTT--CCGGCCGCGGCGC TGGCGCGGC GCGCTGCTGCCGGACAACGCC TTCGTGGTGATCGAA TERM 2926 3592431 - 3592394 - g 70 -11.9 -3.36492 | gap 1, opp_overlap 3592418 GCTCGAAGTCGACAA GCGCCCGGTCGCG-GCGG TGG CCGATCACGACGAGGCGC GGGACGTGCGCCGGG ppnK 3591765 - 3592544 + | inorganic polyphosphate/ATP-NAD kinase TERM 2927 3593795 - 3593772 - g 70 -3.8 -4.56597 | overlap 3593773 3593774 CTGTTGCCGGAAAAA TCCTTCAAGC TGCT GCTCGAAGAC TGCGAGAAAAACCCC TERM 2928 3594080 - 3594056 - g 73 -11.3 -3.65522 | opp_overlap 3594055 3594061 GACCGACCGCAAGAA GCTCGGCGCGC ACT ACACGCCGCGC GCTTATGTCGAACGG TERM 2929 3594203 - 3594163 - g 72 -11.9 -3.55563 | gap 3 AGGCCACCGCCGAAA CGCTGC-GCGGC-GCAGGCG ATCT CGC-TGCCGCCGCCGCCGCG GTGCAGGCGTATCAC RPD_3238 3592974 - 3596528 + | hypothetical protein TERM 2930 3596644 - 3596689 + T 93 -8.6 -5.18726 | gap 3, opp_overlap 3596671, overlap 3596650 GCCACGTCGTCCGGC GCTAGAGCGTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTAAC TTTTTGTTCTGACGC RPD_3239 3597020 - 3596748 - | hypothetical protein TERM 2931 3597165 - 3597147 - R 73 -8.8 -4.0371 | TACTCGTGATAGAAA TGACCGTG CGG CTCGGTCA GCGAGTGATCCCAAT RPD_3240 3597313 - 3597131 - | hypothetical protein TERM 2932 3597953 - 3597934 - g 82 -11.4 -4.11216 | gap 1, overlap 3597935 CGCGCATTCCGAAAA GCGCC-GCG TCA CGCTGGCGC GCGATGCCGGCGTCA RPD_3241 3597644 - 3598189 + | response regulator receiver RPD_3242 3598194 - 3598772 + | hypothetical protein RPD_3243 3600041 - 3598860 - | hypothetical protein RPD_3244 3601494 - 3600400 - | hypothetical protein RPD_3245 3601783 - 3602331 + | hypothetical protein hisI 3602940 - 3602497 - | phosphoribosyl-AMP cyclohydrolase RPD_3248 3603755 - 3603066 - | GTP cyclohydrolase I TERM 2933 3604326 - 3604314 - g 88 -10.5 -4.41494 | overlap 3604316 GATGCTCAAGGAAAA CGGCG CGC CGCCG GACGGCAAATGGGCC RPD_3249 3603946 - 3604467 + | NifU-like protein TERM 2934 3604519 - 3604560 + T 73 -7.1 -4.25104 | gap 1, overlap 3604495 GCGGCGGCGACGTTG CTGCCGGCGCGGTGC-CGCC GGT GGGGAGTGCTGCTTCGGCGG TTTTGGTCGAGGCGA RPD_3250 3605398 - 3604499 - | hypothetical protein TERM 2935 3604662 - 3604634 - G 71 -14.6 -2.52464 | gap 1, overlap 3604596 GGCGGCGGCAACCGA CGCCGCAGCCGCG TCGC CGCG-CTGCGGCA GCAAATCGGCGATCG TERM 2936 3605786 - 3605760 - g 76 -15 -3.16683 | opp_overlap 3605760 ACTCCATGTGATCAA GCGCGCCCCGCG CAA CGCCGGGCGCGG ACTGATCTGGCTCTA RPD_3251 3605698 - 3606108 + | hypothetical protein TERM 2937 3606636 - 3606593 - g 93 -9.5 -4.87803 | gap 2 GAGCGGCAAAGAAAA CGTGAC-CGCGCCCG-CAACG GTGA CGCCGGCGGTCGCGAGTCGCG TCAACACCAATCTGG RPD_3252 3606237 - 3607583 + | hypothetical protein RPD_3253 3608535 - 3607684 - | hypothetical protein RPD_3254 3610077 - 3608614 - | sulfatase TERM 2938 3609042 - 3608989 - G 73 -12.4 -3.38207 | gap 3, overlap 3608985 CAGCCAATAGATGAA GCGCGGCTTGCCGC--CGGCGTCGGCG TCA CGC-GACGCCGCTGCGATCAGCGGCGC GAAATCCGCATCGCA TERM 2939 3610225 - 3610207 - R 91 -11.6 -4.28548 | ATTCAGCCACGAAAA GCACGCGC CTT GCGCGGGC GCGTCATGCCCGGAC RPD_3255 3611497 - 3610283 - | hypothetical protein TERM 2940 3610835 - 3610792 - G 74 -8.1 -4.28361 | gap 3, opp_overlap 3610800 3610801 3610805, overlap 3610772 3610794 3610795 TCAACGCGACGAAAA CATCGACCGG-CGCGCTCGCCG TCG CGGCGGCCGCGACCGG-C-ACG CCCGCGTTCTCCAGC TERM 2941 3610800 - 3610841 + g 71 -12.1 -3.32294 | gap 1, opp_overlap 3610772 3610792 3610795 3610794, overlap 3610801 3610805 ACGAAAACATCGACC GGCGCGCTCGCC-GTCGCGG CGG CCGCGACCGGCACGCCCGCG TTCTCCAGCCTTTCG TERM 2942 3610801 - 3610840 + g 74 -15.6 -2.59055 | gap 1, opp_overlap 3610772 3610792 3610795 3610794, overlap 3610800 3610805 CGAAAACATCGACCG GCGCGCTCGCC-GTCGCGG CGG CCGCGACCGGCACGCCCGC GTTCTCCAGCCTTTC TERM 2943 3611629 - 3611587 - R 74 -10.5 -3.82202 | GACCCGTAAAGATAA CGTTCCG-GAGCGGCGGCGCG CGC CGCGCCGCC-CTCGCCTCACG CCGGCTCGTGGATCG RPD_3256 3612695 - 3611625 - | catalase TERM 2944 3611826 - 3611852 + g 78 -15.8 -3.16564 | opp_overlap 3611819 CGGAATCATCACCAG GCCGACGCGCTG GAA CGGCGCGTCCGC TTCGTCCCATAGCGC RPD_3257 3613275 - 3613484 + | cold-shock protein, DNA-binding TERM 2945 3613741 - 3613720 - g 70 -11.5 -3.38991 | overlap 3613698 3613718 3613721 ACGTGCGCAAGAACA TGGAGCGCC TCCG GGCGCTCCG GCTCGCCAAGCAGGC TERM 2946 3613740 - 3613721 - g 71 -15 -2.63073 | overlap 3613698 3613720 3613718 CGTGCGCAAGAACAT GGAGCGCC TCCG GGCGCTCC GGCTCGCCAAGCAGG RPD_3258 3613587 - 3613832 + | hypothetical protein RPD_3259 3613997 - 3614197 + | hypothetical protein RPD_3260 3615362 - 3614244 - | major facilitator transporter TERM 2947 3615051 - 3614997 - G 80 -9.2 -4.23674 | gap 3, overlap 3614998 GCCCAGGAACACAAA GGTCATGGTGCCGCCGCGCCGCTC-CG GCGG CGTGATCAGCGCGACGGCGCCG-G-CC GATTGCGGGGTGTAG TERM 2948 3615468 - 3615492 + H 72 -7.8 -4.20516 | gap 1 TCCGGATTTGCCGGG GCGGAGGGCGG GAAA CCGC-CTCAGC TTTCTTGCATCGCCG thrS 3615577 - 3617640 + | threonyl-tRNA synthetase RPD_3262 3617651 - 3618226 + | nitroreductase RPD_3263 3620701 - 3618230 - | GGDEF domain-containing protein RPD_3264 3620963 - 3621748 + | HWE histidine kinase RPD_3265 3622083 - 3621898 - | hypothetical protein RPD_3266 3622963 - 3622301 - | cyclic nucleotide-binding RPD_3267 3623273 - 3622947 - | hypothetical protein TERM 2949 3623058 - 3623027 - G 73 -10.8 -3.65046 | CGCGCATCGTAACAA GAGCGACATCGCCA AGCC TGACGTGGTCGCTC TCCCCGGACGCAACA TERM 2950 3623290 - 3623240 - G 70 -10.7 -3.52207 | gap 4, opp_overlap 3623246, overlap 3623243 3623244 TCAAATTAGAACTAA CAAGCGCGATCCCCCGAGCAA-GCG TGCGG CGCATCGCTCGGGGGA-C-CG-TTG ATCACCACACCTTGG TERM 2951 3623290 - 3623243 - G 74 -10.5 -3.87584 | gap 1, opp_overlap 3623246, overlap 3623240 3623244 AATTAGAACTAACAA GCGCGATCCCCCGAGCAA-GCG TGCGG CGCATCGCTCGGGGGACCGTTG ATCACCACACCTTGG TERM 2952 3623289 - 3623244 - G 71 -14 -2.91466 | gap 1, opp_overlap 3623246, overlap 3623240 3623243 ATTAGAACTAACAAG CGCGATCCCCCGAGCAA-GCG TGCGG CGCATCGCTCGGGGGACCGTT GATCACCACACCTTG TERM 2953 3623246 - 3623287 + g 84 -17.3 -3.14211 | gap 1, opp_overlap 3623244 3623240 3623243 TAGAACTAACAAGCG CGATCCCCCGAGC-AAGCGT GCG GCGCATCGCTCGGGGGACCG TTGATCACCACACCT RPD_3268 3623812 - 3623555 - | hypothetical protein TERM 2954 3623639 - 3623662 + g 70 -11.1 -3.61398 | opp_overlap 3623628 GTAATCGCACCCGAA GGTTGTCAG ATAAGC CTGACAACC TTGTTGCAACGGACG RPD_3269 3624937 - 3623882 - | hypothetical protein TERM 2955 3624068 - 3624085 + g 71 -9.1 -3.85698 | gap 1 CGACCACGCGGTGTT GGCGAGCG CTT CGC-CGCC TTTATCGGACACCAG TERM 2956 3625648 - 3625683 + G 75 -14 -3.30441 | gap 1 CATGGCCGGATCGTC GATGCGGTGC-GGGCGT CCT ACGCCCTGCCCGGCATC TTCTCGCCGGTGCTG TERM 2957 3625876 - 3625902 + G 71 -9.5 -3.78934 | gap 2, opp_overlap 3625864, overlap 3625873 3625889 GAACCCGCCGCGGAG CCGGCGGCGAAGC GCG GCTTCG--GCCGG TTCTTCTCGCCGGAG RPD_3270 3625039 - 3626211 + | patatin RPD_3271 3626817 - 3626386 - | putative signal-transduction protein with CBS domains RPD_3272 3628136 - 3627009 - | rhomboid-like protein TERM 2958 3627983 - 3627957 - G 100 -15.2 -5.28176 | GGCACCCACAAAAAA GGGGAGGACTCT GAG AAAGCCCTCCCC TTCAAGCCTGCCGGT TERM 2959 3628632 - 3628586 - g 72 -13.4 -3.14132 | opp_overlap 3628580 GTCGTCGCCGAGGAA GCGCTGCCGCTGGTCGCGGGAG CCA CCACCGCGTCCGGCGACGGCTC GATCGCTCATTTGGA TERM 2960 3628785 - 3628805 + G 72 -13.9 -3.02511 | CGCTCGGCCGCCCGT CCCGCCGCC TGC GGCCGCGGG TGTTGCGCAAATGGG RPD_3273 3628301 - 3628861 + | hypothetical protein RPD_3274 3629613 - 3628843 - | cyclic nucleotide-binding RPD_3275 3630010 - 3629771 - | hypothetical protein TERM 2961 3630386 - 3630398 + G 77 -4.1 -4.7497 | CGATTACTCGAGGCT GTTTC GCG GGAAC TTTTTCGTCGATCGC RPD_3276 3630017 - 3630493 + | hypothetical protein RPD_3277 3630616 - 3633054 + | ATP-binding region, ATPase-like RPD_3278 3633134 - 3633745 + | type IV pilus assembly PilZ TERM 2962 3634075 - 3634065 - f 71 -4.6 -4.44667 | overlap 3634049 GGTCCCAACAAGAAA GCGG GGG CCAC AATGCTTGTTAGCAG RPD_3279 3634077 - 3634700 + | transglutaminase-like cysteine peptidase, BTLCP TERM 2963 3634793 - 3634827 + T 100 -12.2 -5.00616 | gap 1, overlap 3634796 GTCCCAGATCGGATC GTGCGCGGCCAGCCT CCCCCA AGGCTGGCCGCA-AC TTTTTTGGGGCGAGA TERM 2964 3634796 - 3634825 + T 75 -15 -2.75708 | overlap 3634793 CCAGATCGGATCGTG CGCGGCCAGCCT CCCCCA AGGCTGGCCGCA ACTTTTTTGGGGCGA RPD_3280 3635427 - 3634894 - | MarR family transcriptional regulator RPD_3281 3635962 - 3637458 + | hypothetical protein TERM 2965 3637517 - 3637494 - f 86 -16 -3.17714 | opp_overlap 3637494, overlap 3637484 GTAAACCTCCAGGAA CCTCCGGCGA TGCC CCGCCGGAGG TTTTCCTGTTTGTGG TERM 2966 3637494 - 3637517 + F 100 -15.3 -4.53036 | opp_overlap 3637494 3637484 GTAAACCTCCAGGAA CCTCCGGCG ATGCCC CGCCGGAGG TTTTCCTGTTTGTGG TERM 2967 3637959 - 3637916 - g 73 -13 -3.30771 | opp_overlap 3637927 GGACACGTTCGACAA GCTCACGCAGCTCGGCCGCG ACCG CATGGCCACGCTGCAGGAGC TGGCCGACGAGGCCT TERM 2968 3638025 - 3637994 - g 75 -5 -4.57569 | overlap 3638021 CGATCTGTTGAAAAA GCACGGCATTCCGA TCGA TCTGAAGGACGCGC TGCGCAAGAGCGCTG RPD_3282 3637875 - 3638072 + | hypothetical protein RPD_3283 3638085 - 3638246 + | hypothetical protein RPD_3284 3638799 - 3638269 - | hexapaptide repeat-containing transferase RPD_3285 3639187 - 3638858 - | hypothetical protein TERM 2969 3639247 - 3639234 - H 74 -5.2 -4.56597 | CGGGTGTCGCAAAAA GCGG CCTTGC CCGC CATCGCATCGTTAAA TERM 2970 3639697 - 3639686 - g 72 -7.2 -4.2828 | opp_overlap 3639691, overlap 3639687 CCGGAGCGACCAAAA CGCG CCAC CGCG GAAGATGTCGCGGAG RPD_3286 3639374 - 3640084 + | hypothetical protein TERM 2971 3640165 - 3640113 - T 100 -21.1 -3.52652 | overlap 3640088 CTGATCGAATCAGAA CCTCGGCGCGTCCTCCGCGAGCGAG CTG CGCGACTGCGGACGACGCGCCGTGG GGAGGGTCGCGGGTT RPD_3287 3640398 - 3640180 - | hypothetical protein RPD_3288 3641445 - 3640585 - | serine O-acetyltransferase TERM 2972 3640948 - 3640923 - G 91 -11.8 -4.28994 | opp_overlap 3640923 CATGATCGAGGAAAA TCCCGCGGCC GATCCG GGCGGCGGGA TTGATGTCGGTCTGA RPD_3289 3642395 - 3641643 - | alpha/beta hydrolase fold RPD_3290 3643650 - 3642490 - | hypothetical protein TERM 2973 3643181 - 3643198 + g 89 -3.4 -5.26875 | gap 1, overlap 3643169 ACGACGCGATCGATG TC-CGCG CCGGT CGCGAGA TTTTTTCCTTCGCGC TERM 2974 3644075 - 3644053 - g 70 -11.3 -3.59979 | GCGCCCGACCTCAAA TCCGGCGAA GCGCG TCCGCCGGA ATGCGTGCTGAAGGA RPD_3291 3643858 - 3644103 + | hypothetical protein TERM 2975 3644359 - 3644416 + G 81 -16.2 -3.10796 | gap 3 GAGCGCGCGGACCGG CCGCGCGCTGGTGCG-GCTGCCGCTCGGC GAC GCCGCG-GGC-GCACGCGCCGGCGCGCCC TATTGGGTGATCCAC RPD_3292 3644111 - 3645325 + | salicylate 1-monooxygenase RPD_3293 3645816 - 3645370 - | hypothetical protein RPD_3294 3646023 - 3647297 + | cellulose biosynthesis protein CelD TERM 2976 3648376 - 3648388 + G 75 -4.7 -4.59773 | overlap 3648369 GCCCGGACCGGCGAT GGCGG GCG CCGAC TTTTTCGACATCACC RPD_3295 3647834 - 3649009 + | peptidase M20D, amidohydrolase TERM 2977 3649321 - 3649377 + G 85 -17.8 -2.7535 | gap 1, overlap 3649334 3649336 CGGCGACGACCCGGC TCGCGCCGGCGCCG-GCCGATGCGCCG CCTT CGGCGCGGCTGCGCGAAGCCGGTGCGG TGATCTATTCCAAGA RPD_3296 3649002 - 3650417 + | amidase RPD_3297 3650608 - 3651498 + | enoyl-CoA hydratase TERM 2978 3651589 - 3651540 - T 78 -11.6 -3.72893 | gap 3, opp_overlap 3651540 3651539 CACGCTTGTACCAAA CGCTGGTCATTCCGGG-GCGCGAAC GAA GTTCGCGAACCCGGAAT--CCAGAG ATTGTTGCGAAGAGA TERM 2979 3651636 - 3651607 - T 78 -14.3 -3.09273 | gap 1 TGTTGCGAAGAGAGA TTCCGGGTTCGCGC TAT GCGCGC-CCCGGAA TGACGAACGAGAGGA RPD_3298 3653394 - 3651673 - | AMP-dependent synthetase and ligase RPD_3299 3654481 - 3653594 - | 3-hydroxyisobutyrate dehydrogenase TERM 2980 3653663 - 3653640 - G 71 -3 -4.58663 | gap 1, opp_overlap 3653644, overlap 3653641 ATGATTCCTGAAAAA TCAGCGCCGCC ATG GCCGGC-CTGT TCGAACGCCGTGTAA RPD_3300 3655592 - 3654519 - | enoyl-CoA hydratase TERM 2981 3655182 - 3655158 - G 100 -12.1 -4.59109 | overlap 3655160 GACATCGGGGAAAAA CCCGATGCCGA CTT CCGGCATCGCG ATCCTGGTCTTCTCG RPD_3301 3656734 - 3655589 - | acyl-CoA dehydrogenase-like RPD_3302 3658360 - 3656747 - | methylmalonate-semialdehyde dehydrogenase RPD_3303 3659080 - 3658415 - | TetR family transcriptional regulator RPD_3304 3659229 - 3659999 + | enoyl-CoA hydratase RPD_3305 3660656 - 3660027 - | phenylacetic acid degradation-related protein RPD_3306 3660855 - 3662042 + | Acetyl-CoA C-acetyltransferase TERM 2982 3662197 - 3662223 + G 81 -16.5 -3.17229 | opp_overlap 3662190, overlap 3662195 TGACCACACTGGTCT CGGCCGGCGCG GTCGG CGCGCCGGGCG TCTTCATCCTGCCGT RPD_3307 3662103 - 3663386 + | major facilitator transporter RPD_3308 3664491 - 3663544 - | regulatory proteins, IclR RPD_3309 3664628 - 3664891 + | hypothetical protein TERM 2983 3665124 - 3665104 - f 76 -6.2 -4.60487 | gap 1, overlap 3665108 CATGATCCTCAAAAA GCTATTCGC TCGA GCGAAT-GC ATCTGGGGAGAGAGA RPD_3310 3665141 - 3666301 + | TRAP transporter solute receptor TAXI family protein TERM 2984 3666388 - 3666368 - g 73 -11.2 -3.72576 | opp_overlap 3666360 3666366 TCTCGCCCGACCAAA CGGATCGT GTTCG ACGATCCG CATTCGGTCGACAAC RPD_3311 3666332 - 3668410 + | TRAP transporter, 4TM/12TM fusion protein RPD_3312 3670525 - 3668432 - | CoA-binding RPD_3313 3670887 - 3670522 - | hypothetical protein TERM 2985 3670948 - 3670907 - R 71 -11 -3.51934 | overlap 3670905 3670928 CCCGCTCCAGAAACA TGCTG-ACATGCGACGACAG CACG CCGCCGTCGC-CGTGCAGCA GCGCCACCGAGGCGT RPD_3314 3672098 - 3670884 - | thiolase TERM 2986 3671124 - 3671141 + g 78 -14.1 -3.53012 | opp_overlap 3671108, overlap 3671126 CCCACTGCGCGCTTG CGCGGCG GCTT CGCCGCG TTTGGCGAGGCCGAG RPD_3315 3673412 - 3672201 - | L-carnitine dehydratase/bile acid-inducible protein F RPD_3316 3673654 - 3674547 + | hypothetical protein TERM 2987 3674679 - 3674668 - T 80 -5.8 -4.78752 | overlap 3674634 3674632 3674631 3674669 3674678 ATCAGAACCGAAAAA GCTC TAGA GAGC CGTCACCCTGCAGCG RPD_3317 3676325 - 3674799 - | AMP-dependent synthetase and ligase TERM 2988 3675560 - 3675503 - G 89 -18.5 -2.87132 | gap 3, overlap 3675483 3675506 3675558 GCCCGCCGCCATACA CGA-TGGT-G-CGCAGCCCGTCGCCGCG CTCGC CGCGGCGCCGGGCGGCGTCGACCAACCG CCGCACCATGGTCGG TERM 2989 3675556 - 3675506 - G 100 -21.2 -2.69151 | gap 2, overlap 3675483 3675503 CGCCGCCATACACGA TGGT-G-CGCAGCCCGTCGCCGCG CTCGC CGCGGCGCCGGGCGGCGTCGACCA ACCGCCGCACCATGG TERM 2990 3675971 - 3675997 + g 93 -19.4 -2.78816 | overlap 3675987 CGGACGGCAGATCGT CCACCGCCTCGC CGA GCGAGGCGGCGG TGTCGTCGCAGATCA RPD_3318 3677518 - 3676349 - | acetyl-CoA acetyltransferase TERM 2991 3677665 - 3677621 - R 78 -7 -4.62069 | overlap 3677623 3677637 CCGGTAGGGCAAAAA GTCTGGCG-GGCGAGAACGCCG GAC CGCCGG-CTCGCCGCGTCAGGC GACGAAATTGCCGCC RPD_3319 3678646 - 3677660 - | NAD-dependent epimerase/dehydratase RPD_3320 3679738 - 3678818 - | binding-protein-dependent transport systems inner membrane component TERM 2992 3679353 - 3679319 - G 81 -11.5 -4.01137 | gap 2, overlap 3679321 3679322 CAGATAAGCGAGAAA GA-TC-GCGCCGCCGAC GCT GTCGGCGCCGCGGAATC GCAACCGCACGATCG TERM 2993 3679349 - 3679321 - G 83 -15.9 -3.58879 | overlap 3679319 3679322 GATAAGCGAGAAAGA TCGCGCCGCCGAC GCT GTCGGCGCCGCGG AATCGCAACCGCACG TERM 2994 3679348 - 3679322 - G 93 -19.4 -2.74604 | overlap 3679321 3679319 ATAAGCGAGAAAGAT CGCGCCGCCGAC GCT GTCGGCGCCGCG GAATCGCAACCGCAC RPD_3321 3680684 - 3679731 - | binding-protein-dependent transport systems inner membrane component RPD_3322 3682268 - 3680943 - | twin-arginine translocation pathway signal TERM 2995 3681515 - 3681505 - G 77 -5.4 -4.63218 | GTGCCGGGAATAAAA CTGT CGT ACAG ACCCTTGGTGTACTC RPD_3323 3683420 - 3682356 - | ABC transporter related TERM 2996 3682702 - 3682736 + g 72 -8.6 -4.15788 | opp_overlap 3682662 3682702, overlap 3682726 GTTCCATCGAGAAAA TTCATCGCCGGC GAGCCGATGAA GCCGGCGACGAA TTTGTTGGCCGGGTT TERM 2997 3682736 - 3682702 - G 93 -10.8 -4.42386 | opp_overlap 3682702 3682726, overlap 3682662 GTTCCATCGAGAAAA TTCATCGCCGGC GAGCCGATGAA GCCGGCGACGAA TTTGTTGGCCGGGTT RPD_3324 3683658 - 3685466 + | dihydroxy-acid dehydratase TERM 2998 3685633 - 3685577 - f 100 -20.1 -3.53012 | overlap 3685553 CGGGGCGCGCGCAAA GCGCGCGGATCCGGAATCCCGAGATGC CCT GAACCTCTGGATTCCGGGTCTGCGCCC TGCGGGCGCATCCCG TERM 2999 3686151 - 3686118 - g 73 -13.1 -3.28712 | gap 1 GGCCGGCGTCTACAA GGCGGCGCCG-AACCG CTA CGTCTACGGCGCCACC AAGGCCGCGGTCGCG RPD_3325 3685699 - 3686433 + | short-chain dehydrogenase/reductase SDR RPD_3326 3686447 - 3687196 + | short-chain dehydrogenase/reductase SDR TERM 3000 3687324 - 3687361 + G 71 -9 -3.78775 | GTTCCAATGGGCCTA CTCGCACCCTTCGCAG ACATTG CTGCAGCGGGCGCGAG TTTGCTCATCGCGCA RPD_3327 3687315 - 3687605 + | hypothetical protein TERM 3001 3687971 - 3687927 - g 71 -2.8 -4.58395 | overlap 3687928 TCGAGCTTGGAAAAA CCGGGCCAG-CAGCTGCGATCA CAC TG-TCGATGCTGGCTGAGCCGA CGCTGGCACGCCGTC RPD_3328 3687608 - 3688171 + | regulatory protein, TetR RPD_3329 3688254 - 3689414 + | secretion protein HlyD TERM 3002 3691100 - 3691114 + G 82 -6.4 -4.74103 | overlap 3691101 TCGTCTACAGCGTTC TCATCG CAG CGATGG TTTTTGGCTTCAACC RPD_3330 3689464 - 3692592 + | hydrophobe/amphiphile efflux-1 HAE1 RPD_3331 3693545 - 3692751 - | TonB-like RPD_3332 3694094 - 3693642 - | biopolymer transport protein ExbD/TolR RPD_3333 3694982 - 3694098 - | MotA/TolQ/ExbB proton channel TERM 3003 3694185 - 3694157 - G 70 -10.9 -3.53444 | overlap 3694162 CGAGGTCGCGCGAAA GCAACCGTCCGAC CGC GCCGGACGCCCGC GACACCAGTTCGAGA RPD_3334 3695668 - 3694979 - | putative hydroxylase TERM 3004 3695176 - 3695148 - G 100 -12.3 -5.37345 | overlap 3695150 TGCAACCAGAAAAAA GACGCGACCCGCG CTC CGCGGGTCACGGG CGTCACCATGTGCAG TERM 3005 3695174 - 3695150 - G 100 -19.3 -4.31563 | overlap 3695148 CAACCAGAAAAAAGA CGCGACCCGCG CTC CGCGGGTCACG GGCGTCACCATGTGC TERM 3006 3695606 - 3695635 + g 70 -10.7 -3.54129 | CCAGTCCGCTTGGTC CATCAGGCGACGG AATT CCGTCACCTCATG TTTCGACAGAATCTC RPD_3335 3698077 - 3695693 - | TonB-dependent receptor, plug TERM 3007 3697801 - 3697848 + g 73 -11.1 -3.73224 | gap 1, opp_overlap 3697781, overlap 3697802 CCGGCGCCACCTGAG CCGGCTGCGCGCGCCGCGCCGC ACGGC GCAACGCGGTGCGCGCA-CGGA TTTGATCGGGCGTCG TERM 3008 3697802 - 3697847 + g 73 -14.6 -2.8372 | gap 1, opp_overlap 3697781, overlap 3697801 CGGCGCCACCTGAGC CGGCTGCGCGCGCCGCGCCGC ACGGC GCAACGCGGTGCGCGCA-CGG ATTTGATCGGGCGTC TERM 3009 3698234 - 3698209 - R 79 -11.1 -3.95036 | overlap 3698210 3698212 AACCATTCTAAACAA GCACCTCCGGA GACA TCCGGAGGCGA TCACAGAAACCGTAC TERM 3010 3698233 - 3698210 - R 77 -14.6 -2.96298 | overlap 3698209 3698212 ACCATTCTAAACAAG CACCTCCGGA GACA TCCGGAGGCG ATCACAGAAACCGTA TERM 3011 3698231 - 3698212 - R 75 -13.6 -3.03085 | overlap 3698210 3698209 CATTCTAAACAAGCA CCTCCGGA GACA TCCGGAGG CGATCACAGAAACCG RPD_3336 3698559 - 3698314 - | hypothetical protein TERM 3012 3699925 - 3699890 - g 71 -12.6 -3.24747 | opp_overlap 3699886 3699890 CTTCTACACCACCAA GAGCCAAGGCCGAG GAACCGGG CTCGGCCTCGCCTC TGCGTTTGAACTGGC RPD_3337 3698808 - 3700937 + | sensory box histidine kinase/response regulator RPD_3338 3700934 - 3701314 + | hypothetical protein RPD_3339 3703342 - 3702215 - | putative OpgC protein RPD_3340 3703762 - 3703394 - | hypothetical protein RPD_3341 3706974 - 3703762 - | heavy metal efflux pump CzcA RPD_3342 3708048 - 3707053 - | secretion protein HlyD RPD_3343 3709316 - 3708045 - | outer membrane efflux protein RPD_3344 3709795 - 3709370 - | hypothetical protein RPD_3345 3710465 - 3710115 - | S-adenosylmethionine decarboxylase-like TERM 3013 3711376 - 3711404 + G 75 -3 -4.84359 | gap 1, overlap 3711372 3711377 GTTCGCGCAATGGCC GCCGCGGCAGATG CTGG CG-CTGCAGCGGG TTTTTCTCGACCTCG TERM 3014 3711532 - 3711503 - g 84 -17.1 -3.09933 | gap 1 GGGCAACTGATCGAA CTCG-CCGCGGCGG GCC CCGCCGCGGCCGCG CTGCCGGCGTGGCAG RPD_3346 3710570 - 3711724 + | hypothetical protein RPD_3347 3711803 - 3712270 + | GCN5-related N-acetyltransferase TERM 3015 3712274 - 3712256 - T 83 -7.4 -4.60041 | overlap 3712257 ATCTATCTGGAAAAA CCGCTCAA GGA TTGAGCGC TATAGCGTTTTCGAG TERM 3016 3712391 - 3712374 - T 72 -7.7 -4.22338 | gap 1 ATCAGAACCGGAAAA GCGCGAGA TCG TC-CGCGC GCGGCAAAGCCTCTT RPD_3348 3713022 - 3712360 - | hypothetical protein RPD_3349 3714525 - 3713026 - | peptidase S1C, Do RPD_3350 3714923 - 3714723 - | hypothetical protein TERM 3017 3714973 - 3715000 + r 83 -17 -2.64422 | opp_overlap 3714976, overlap 3714976 GCAGCGATTGTTGAA GAAGCGCGGACC TTGC GGCCCGCGCTTC TGATGTCGCGTCTGT TERM 3018 3714976 - 3714997 + r 76 -12.9 -3.47078 | opp_overlap 3714976, overlap 3714973 GCGATTGTTGAAGAA GCGCGGACC TTGC GGCCCGCGC TTCTGATGTCGCGTC TERM 3019 3714997 - 3714976 - R 86 -15.1 -3.62597 | opp_overlap 3714976 3714973 GCGATTGTTGAAGAA GCGCGGACC TTGC GGCCCGCGC TTCTGATGTCGCGTC RPD_3351 3716016 - 3715081 - | HflC protein TERM 3020 3715110 - 3715145 + g 72 -14 -3.04263 | gap 1 CAGCCGGCTCGGGAG CCGCAGGCGCAGCCG TAGTCGT CGGCCGCG-CTGCGG TCTTGCCGCTCGGAT TERM 3021 3715795 - 3715818 + g 81 -11.8 -3.93963 | GATCACTTCCTGAGA CGGATTTTCG AGAT CGAGAATCCG TTTGTCGATGCTGAT RPD_3352 3717182 - 3716013 - | HflK protein RPD_3353 3717875 - 3717336 - | dihydrofolate reductase TERM 3022 3717404 - 3717375 - G 75 -7.1 -4.39166 | gap 1, overlap 3717377 GGTCACATAGGAAAA CTCGACGCT-GTCC TCG GGACCAGCGCCATG GCGCGTTCGCGCCAC thyA 3718666 - 3717872 - | thymidylate synthase TERM 3023 3718580 - 3718612 + g 74 -2.1 -4.75174 | gap 3, opp_overlap 3718582, overlap 3718583 3718588 CATCTGATGGCCGAA CACCGACAGCGTACCG GTCC CGGTGCG--GTCG-TG TTTTTCAGTTCCGTC RPD_3355 3719836 - 3718823 - | hypothetical protein RPD_3356 3721192 - 3720206 - | hypothetical protein TERM 3024 3721096 - 3721074 - G 70 -10.6 -3.53012 | overlap 3721075 CCGCCGGCTGCGAAA GGCACGATCA TGG TGATCGTGCG TACCGGATAGTCCGC TERM 3025 3721337 - 3721315 - R 71 -5.5 -4.26903 | gap 1 CGGATTCGACGAAAA CCTCCTCGCG CTTT CGCC-GGAGG GACGGAAGCACCGCG RPD_3357 3722809 - 3721295 - | hypothetical protein RPD_3358 3723319 - 3722819 - | hypothetical protein TERM 3026 3723337 - 3723352 + H 83 -7.5 -4.55295 | overlap 3723329 3723328 TTCCCTCCCCGTTTC CGGGC TTTGTC GCCCG TTTGTTTGTCGGCGG TERM 3027 3724618 - 3724580 - g 86 -16.7 -3.53343 | gap 1, overlap 3724567 3724581 AAGGCGCTGCTGAAA CCGCCGACGCCAGCGCTC CGGA GATCGC-AGCGCCGGCGG CGACCCCTGCCATGC TERM 3028 3724623 - 3724581 - g 72 -14.7 -2.71791 | overlap 3724567 3724580 AGGCGCTGCTGAAAC CGCCGACGCCAGCGCTCCG GAGAT CGCAGCGCCGGCGGCGACC CCTGCCATGCTGGCG RPD_3359 3724150 - 3724734 + | hypothetical protein TERM 3029 3724835 - 3724793 - f 100 -28 -5.18726 | opp_overlap 3724794, overlap 3724823 GCGTCAGAACAAAAA GCTGGAGCTCCGGTTCTGAT ACT ATCAGAACCGGAGCTCTAGC CCCCGCGCGACGCGA fumC 3724921 - 3726339 + | fumarate hydratase RPD_3361 3726606 - 3726794 + | hypothetical protein RPD_3362 3726791 - 3727066 + | hypothetical protein RPD_3363 3731019 - 3727093 - | AsmA TERM 3030 3728026 - 3727999 - G 70 -11.2 -3.61654 | GAGACTGATCGGAAA CTGGACGCTGTC CACC GCCAGCGTCCCG CCCGCCAGTACCGGC RPD_3364 3732582 - 3731155 - | FAD linked oxidase-like TERM 3031 3732695 - 3732708 + G 84 -9.5 -4.50627 | overlap 3732692 ACACGACGATTGTTG CGGCG CCCG CGCCG TTTGTTTCATCGGTG RPD_3365 3732652 - 3733191 + | thioesterase-like RPD_3366 3733374 - 3733201 - | hypothetical protein TERM 3032 3733761 - 3733793 + G 71 -9 -3.86897 | gap 1, overlap 3733763 3733764 TGCCGGCGGCATCGC CGCGCGGGCG-CGCG CGTC CGCGGCGCCCGCCTA TTTGTCGGGACTCAA TERM 3033 3733763 - 3733791 + G 78 -13.8 -3.5241 | gap 1, overlap 3733761 3733764 CCGGCGGCATCGCCG CGCGGGCG-CGCG CGTC CGCGGCGCCCGCC TATTTGTCGGGACTC TERM 3034 3733764 - 3733790 + G 80 -17.3 -2.71125 | gap 1, overlap 3733763 3733761 CGGCGGCATCGCCGC GCGGGCG-CGCG CGTC CGCGGCGCCCGC CTATTTGTCGGGACT RPD_3367 3733693 - 3736236 + | UvrD/REP helicase RPD_3368 3738741 - 3736240 - | ATP-binding region, ATPase-like TERM 3035 3738232 - 3738212 - G 81 -7.5 -4.62069 | opp_overlap 3738215 GTTCTACTGTAAAAA CGCCGAAGC TCC ACTTCGTCG ATTAGAAAAATAGTC RPD_3369 3739023 - 3739490 + | hypothetical protein RPD_3370 3739649 - 3740569 + | ABC transporter related RPD_3371 3740572 - 3741333 + | hypothetical protein TERM 3036 3741340 - 3741355 + T 74 -10.4 -3.72576 | AAGGCCTGACGCCGC TGCCGC CAAA GCGGCA TTTGATCGGGCAGCA TERM 3037 3741376 - 3741398 + T 86 -17.7 -2.72344 | opp_overlap 3741376 TCGGGCAGCAAAAAA GGCGCGGCC ATTGC GGCCGCGCC TCGTTCACCATCAGG TERM 3038 3741398 - 3741376 - T 100 -18.4 -5.14563 | opp_overlap 3741376 TCGGGCAGCAAAAAA GGCGCGGCCA TTG CGGCCGCGCC TCGTTCACCATCAGG RPD_3372 3741763 - 3741422 - | hypothetical protein TERM 3039 3742253 - 3742283 + G 70 -2.5 -4.58395 | gap 2, opp_overlap 3742253, overlap 3742255 TCACTACTCGAAGGA GTTCGACGATGCGCC GAT GCCGCA-CG-CGATC TTTTTCACCCGTCAG RPD_3373 3741993 - 3742805 + | ErfK/YbiS/YcfS/YnhG TERM 3040 3742830 - 3742855 + T 100 -15.4 -5.28942 | TTCACGCCTTCCGAA CGCGCGGCCG CCCGGA CGGTCGCGCG TTTTTCTTTGCGCTA RPD_3374 3745147 - 3742868 - | hypothetical protein TERM 3041 3743428 - 3743408 - G 70 -2.4 -4.59773 | overlap 3743410 GTCGATCTCGAAAAA CCGCCAAG TCTCG CCCGGCTG CGCGGCGCAGGTCAG TERM 3042 3745385 - 3745408 + H 71 -8.8 -3.88137 | gap 1 AGTGTGGACACCTTG TGGCCGGCGGC GAC GCCGG-GGCCA TTTCTCGACCATTCT TERM 3043 3745806 - 3745788 - g 72 -8.8 -4.08945 | ACGACGCCGGCAAAA TCGACGGC TTC ACCGCCGA ACTGGAAACGATCGC RPD_3375 3745433 - 3747043 + | FAD dependent oxidoreductase RPD_3376 3747614 - 3747219 - | hypothetical protein RPD_3377 3747866 - 3748753 + | ribosomal L11 methyltransferase RPD_3378 3748954 - 3748757 - | hypothetical protein RPD_3379 3749123 - 3750952 + | peptidase M24 RPD_3380 3751209 - 3752543 + | Bcr/CflA subfamily drug resistance transporter RPD_3381 3755736 - 3753592 - | DNA ligase, NAD-dependent TERM 3044 3755464 - 3755434 - G 85 -13.3 -4.08767 | gap 1 CTCATCGTCCGAAAA CGCGTTGCCGA-GC GACA GCATCGGCACCGCG TGCTGCACCTTGGAA TERM 3045 3755499 - 3755482 - G 72 -8.3 -4.09685 | overlap 3755483 CTGCACCTTGGAAAA GCCGCGC GCCG GCGCCGC GCCGACCGTCTGGCT RPD_3382 3755806 - 3756168 + | excinuclease ABC subunit C TERM 3046 3756310 - 3756262 - T 78 -15.2 -2.72227 | gap 1 AACACCTGTCAACGA GTCATTCCGGG-GCGGCCGCCGC GGGA GCGGCGGGCGAACCCGGAATCTC GACCGTCGTGGCACT RPD_3383 3758025 - 3756340 - | DNA repair protein RecN TERM 3047 3756366 - 3756389 + g 71 -15.2 -2.62184 | overlap 3756363 CCTTGATCAGCCGGT CCGCCGCGGC CCTT GCCTCGGCGG TGATCTCGGCGCCGG RPD_3384 3758943 - 3758038 - | putative lipoprotein lpxC 3760151 - 3759189 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3048 3759415 - 3759386 - G 83 -12.1 -4.09243 | opp_overlap 3759405 3759411, overlap 3759395 GATAGGCGCCCAAAA TCGGCAAACCGGC CAGC GCCAGATCGCCGA TCGCGTCGAGCAGCT TERM 3049 3759961 - 3759977 + g 77 -12.3 -3.66654 | AGCACGGTGGCGAGT TCGGTGG CGA CCACCGA TTTGGCGTTGGCCTG TERM 3050 3760063 - 3760034 - G 79 -4.9 -4.82901 | overlap 3760039 CGGTGCGGACAAAAA TATAACCCGCATC GATC GATGCGGGCCCGA TGGTGAGATTGACGG TERM 3051 3760058 - 3760039 - G 85 -13.6 -4.13816 | overlap 3760034 CGGACAAAAATATAA CCCGCATC GATC GATGCGGG CCCGATGGTGAGATT TERM 3052 3760473 - 3760440 - R 100 -15.3 -4.4009 | opp_overlap 3760443, overlap 3760443 TCGCAGCGCACAAAA TAATGACCCCGGAGG CTGC CCTCCGGGGTCATGT CATCGTTACAAATGA TERM 3053 3760443 - 3760470 + r 100 -21.4 -2.86164 | opp_overlap 3760440 3760443 CAGCGCACAAAATAA TGACCCCGGAGG CTGC CCTCCGGGGTCA TGTCATCGTTACAAA TERM 3054 3760470 - 3760443 - R 100 -21.4 -4.32067 | opp_overlap 3760443, overlap 3760440 CAGCGCACAAAATAA TGACCCCGGAGG CTGC CCTCCGGGGTCA TGTCATCGTTACAAA RPD_3386 3762285 - 3760498 - | cell division protein FtsZ TERM 3055 3761260 - 3761301 + g 100 -21.6 -2.52464 | gap 1 CAGTTCAGCCAGACG GCTGTCAGCCGGCGCAGCG TTGGC CGCCGCGCCGGCTG-CGGC TGCGTTACGCGACAA RPD_3387 3763662 - 3762379 - | cell division protein FtsA RPD_3388 3764693 - 3763701 - | cell division protein FtsQ TERM 3056 3763935 - 3763969 + g 79 -16.4 -3.00476 | gap 1, opp_overlap 3763933 GGTCAGCCAGATATT CCAGCGCCGCTCGCC GATCAG GGCG-GCGGCGCGGG TCTGTGCTTGCACCT RPD_3389 3765962 - 3764973 - | D-alanine--D-alanine ligase RPD_3390 3767451 - 3766132 - | hypothetical protein TERM 3057 3766969 - 3766942 - G 73 -12.6 -3.39449 | CGTCAGCAACACCAA CGCGCTCGGCTG ACCA CGGCCGAGCCCG TCGCCGAAGAACGGC TERM 3058 3767296 - 3767269 - G 72 -12 -3.52192 | GGCAACTTCATATAA CGGATAGCCGGT CCAC ACCGCCCATCCG GCGCGGAAGAACACC TERM 3059 3767793 - 3767821 + G 83 -13.1 -3.80841 | overlap 3767792 3767774 GGCACCTTCGTGACG CTGGCGCTGCTGT ATT ACGGCATCGCCGG TTTGCTCGTCATCGT TERM 3060 3768388 - 3768368 - g 75 -13.9 -3.32343 | opp_overlap 3768361, overlap 3768369 GGTACACCTCGATAA GCCGCGCGC GAT GCTCGCGGC GCTGACGGTGTTCGC TERM 3061 3768427 - 3768369 - g 71 -15.1 -2.59191 | opp_overlap 3768361, overlap 3768368 GTACACCTCGATAAG CCGCGCGCGATGCTCGCGGCGCTGACG GTGTT CGCCACCGGCGCAATCGTCGCACTCGG ATTGATCGCGCTTCA RPD_3391 3767745 - 3768581 + | hypothetical protein murB 3769571 - 3768639 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 3771012 - 3769609 - | UDP-N-acetylmuramate--L-alanine ligase TERM 3062 3770208 - 3770256 + g 74 -12.4 -3.59979 | gap 2 CATGCGCGGTGCCGG CCTTGCGGTCGCGGAACGCGACCT TGA AGGTCGAGC-CCGCGCCCG-AGGG TTTGAGATCGAGCAG murG 3772245 - 3771145 - | N-acetylglucosaminyl transferase TERM 3063 3771514 - 3771496 - G 79 -4.5 -4.83615 | gap 1, opp_overlap 3771498, overlap 3771497 3771498 CAGGTCGGAGAAAAA CG-GCGCG AGTT CGCACGCG ATCTTCAACCGGTCG RPD_3395 3773395 - 3772250 - | cell cycle protein TERM 3064 3773587 - 3773608 + r 76 -7.9 -4.25104 | CTGGGTCGCCCGCTT TCGCGGGCG ATGA CGTCCGGGA TTTTGCTCACGCCAC murD 3775027 - 3773615 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 3776270 - 3775185 - | phospho-N-acetylmuramoyl-pentapeptide-transferase RPD_3398 3777720 - 3776281 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alany l-D-alanyl ligase TERM 3065 3777686 - 3777630 - G 73 -10.8 -3.64703 | gap 2, overlap 3777639 GGCTGTCGATCGAAA TGCCGAACACG-T-CGCGCGGCAGCGAG CCG CTCGCGGCGGCGCGCATCGCCTCCGCCA TCGCATCCGAAGTCC TERM 3066 3777674 - 3777639 - G 72 -13.2 -3.0806 | gap 1, overlap 3777630 TCGAAATGCCGAACA CGTCGCGCGGCAGCGAG CCG CTCGCGGCGGCGCG-CA TCGCCTCCGCCATCG murE 3779189 - 3777717 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 3067 3778923 - 3778896 - G 70 -10.4 -3.65812 | overlap 3778897 CTGTCGCGAATAGAA TCGCGCGGCGGC CAGC GCCAGCGCGCGG CGCGGATTGCCGAGG RPD_3400 3781061 - 3779307 - | peptidoglycan glycosyltransferase RPD_3401 3781441 - 3781058 - | hypothetical protein RPD_3402 3782634 - 3781438 - | methyltransferase TERM 3068 3782375 - 3782358 - G 78 -9.8 -4.03234 | TGCCGTCGACATAAA CGCCGC CGTCGC GCGGCG CGAGCAAGCCCACCG RPD_3403 3782937 - 3783803 + | N-acetylmuramoyl-L-alanine amidase TERM 3069 3784070 - 3784052 - T 76 -8.8 -4.15106 | overlap 3784064 GAGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCGTCGCCGGCAACG TERM 3070 3784361 - 3784397 + T 100 -12.3 -4.52589 | gap 1, opp_overlap 3784352 3784365 3784366 3784368, overlap 3784364 AAAAACGCGGCCATA TGAATGAGGGGCCGGC ACACAC GCCGGCCCCTCGC-CA TTTTCTCTGCCAGGC TERM 3071 3784364 - 3784395 + T 77 -15.1 -2.58418 | opp_overlap 3784352 3784365 3784366 3784368, overlap 3784361 AACGCGGCCATATGA ATGAGGGGCCGGC ACACAC GCCGGCCCCTCGC CATTTTCTCTGCCAG TERM 3072 3784394 - 3784365 - T 91 -17.1 -3.25942 | opp_overlap 3784364 3784361, overlap 3784352 3784366 3784368 ACGCGGCCATATGAA TGAGGGGCCGGCA CACA CGCCGGCCCCTCG CCATTTTCTCTGCCA TERM 3073 3784393 - 3784366 - T 91 -20.6 -2.55351 | opp_overlap 3784364 3784361, overlap 3784365 3784352 3784368 CGCGGCCATATGAAT GAGGGGCCGGCA CACA CGCCGGCCCCTC GCCATTTTCTCTGCC TERM 3074 3784391 - 3784368 - T 84 -17.4 -2.81547 | opp_overlap 3784364 3784361, overlap 3784366 3784365 3784352 CGGCCATATGAATGA GGGGCCGGCA CACA CGCCGGCCCC TCGCCATTTTCTCTG RPD_3404 3786226 - 3784424 - | ABC transporter related RPD_3405 3788144 - 3786558 - | EmrB/QacA family drug resistance transporter TERM 3075 3787389 - 3787365 - G 81 -5.5 -4.83615 | opp_overlap 3787382, overlap 3787379 3787382 CACCCGCCAGAAAAA CGCCACCGCGG AAA CCACGCAGACG ATCGCGAAAATCAGG RPD_3406 3789430 - 3788171 - | secretion protein HlyD TERM 3076 3788605 - 3788645 + g 80 -9 -4.2679 | overlap 3788608 3788633 CGCGCTCGGCCTTGG CGA-GCGAGCTCTGCAGCTC GAC GAGCTG-GGCGCGCGCTTCG TTTTGCTGCGCCTTG TERM 3077 3788858 - 3788808 - G 79 -13.2 -3.64703 | gap 1, overlap 3788809 3788812 TGCTGGCGATCGAAA TCGAGCGCAGCGCG-CTTGGCCG CGGCCT CGGCGGAGTCGCGCTGCGCTTGC GCCTGCTCGACGGCG TERM 3078 3788857 - 3788809 - G 77 -16.7 -2.78679 | gap 1, overlap 3788808 3788812 GCTGGCGATCGAAAT CGAGCGCAGCGCG-CTTGGCCG CGGCCT CGGCGGAGTCGCGCTGCGCTTG CGCCTGCTCGACGGC TERM 3079 3788854 - 3788812 - G 80 -17 -2.66272 | gap 1, overlap 3788809 3788808 GGCGATCGAAATCGA GCGCAGCGCG-CTTGGCCG CGGCCT CGGCGGAGTCGCGCTGCGC TTGCGCCTGCTCGAC TERM 3080 3789462 - 3789485 + H 78 -12.4 -3.68341 | gap 1, overlap 3789464 TCATTCACACGTACG CCGGCCC-GGC GCC GCTAGGGCCGG TTCTTAGCTACCATT TERM 3081 3789550 - 3789566 + H 70 -7.9 -4.03234 | GAATTGTTGGCAGAT CGCCCCT TTC AGCGGCG TTTCTGTCGCACCGA RPD_3407 3789603 - 3790259 + | TetR family transcriptional regulator RPD_3408 3791546 - 3790299 - | extensin-like RPD_3409 3793596 - 3791641 - | chemotaxis sensory transducer RPD_3410 3793807 - 3794043 + | hypothetical protein RPD_3411 3797461 - 3794069 - | Outer membrane autotransporter barrel TERM 3082 3796708 - 3796739 + g 79 -10.9 -3.9461 | overlap 3796709 CGCCGCTGTAGGTGT TGGCGCCGGACA-GC ATCA GCGTG-CCGGCGCCG TTCTTGTTGACCACG TERM 3083 3797498 - 3797516 + H 74 -5.8 -4.42851 | opp_overlap 3797479, overlap 3797485 3797500 CGCCGTTCCGACGCA CGCGGGCG CGC CGGCCGGG TTTTGCATTTATTGA RPD_3412 3797810 - 3798763 + | regulatory protein, LysR RPD_3413 3798800 - 3799432 + | epoxide hydrolase-like phosphatase RPD_3414 3799558 - 3799893 + | ArsR family transcriptional regulator RPD_3415 3799890 - 3800945 + | permease RPD_3416 3801021 - 3801257 + | thiol-disulfide isomerase and thioredoxins RPD_3417 3802297 - 3801254 - | bile acid:sodium symporter TERM 3084 3801682 - 3801626 - G 72 -13.2 -3.14344 | gap 3, overlap 3801596 CAGCGTCGCCAGCAA GGCGAG-CAGCG--ACAGCGGCTGC AGCCGGCCGA GCAGCCGCTGCAACGCCGCCTCGCC GCCGCTCGCCAGCAC RPD_3418 3802924 - 3802499 - | arsenate reductase TERM 3085 3802591 - 3802562 - G 81 -8.5 -4.56775 | ATCCTCCTTGAAAAA CTCCCCCTGCTGC GGCG GCAGCAGATCGAG CACGTGTTCGGACGG RPD_3419 3803451 - 3802924 - | low molecular weight phosphotyrosine protein phosphatase RPD_3420 3803839 - 3803444 - | regulatory protein, ArsR RPD_3421 3803914 - 3804231 + | regulatory protein, ArsR arsM 3804328 - 3805143 + | arsenite S-adenosylmethyltransferase TERM 3086 3805167 - 3805197 + T 71 -12.5 -3.05844 | opp_overlap 3805148 CGAGCGCCCCTTCGC GCGGGCGCCGG ACACAGATC CCGGCGCCCGA TGTTGAAATCGCCAG tnaA 3806664 - 3805216 - | tryptophanase TERM 3087 3806812 - 3806801 - H 76 -5.8 -4.53602 | CGCAGACGAAACAAA TCCC TACC GGGA CGAAACCAAATTCGA RPD_3424 3806935 - 3807633 + | ErfK/YbiS/YcfS/YnhG TERM 3088 3807655 - 3807686 + F 70 -10.3 -3.66654 | gap 2, opp_overlap 3807660, overlap 3807660 GCGAAAGATCCGATC GG-A-AATGGCGCGG GTGA CCGCGCCATTCTGCC TTTCCGATTGGCGTC TERM 3089 3807679 - 3807660 - f 85 -15 -3.60805 | opp_overlap 3807655 3807660 AGATCCGATCGGAAA TGGCGCGG GTGA CCGCGCCA TTCTGCCTTTCCGAT TERM 3090 3807660 - 3807679 + F 83 -15 -3.47617 | opp_overlap 3807660, overlap 3807655 AGATCCGATCGGAAA TGGCGCGG GTGA CCGCGCCA TTCTGCCTTTCCGAT RPD_3425 3807844 - 3809379 + | hypothetical protein TERM 3091 3809449 - 3809423 - T 100 -17.3 -4.67048 | opp_overlap 3809420 TCAGTCGAAAAGAAA CGCCGAGCGGC GGAGA GCCACTCGGCG AAGTCGTCTCGCAAA TERM 3092 3809470 - 3809496 + T 100 -13.7 -4.80959 | opp_overlap 3809465, overlap 3809472 GTCTCGCAAACGGGG CATCCGGACGC GCAAG GCGTCCGGACG TTTTGTTATGACTTG TERM 3093 3809472 - 3809494 + T 74 -14.9 -2.6741 | opp_overlap 3809465, overlap 3809470 CTCGCAAACGGGGCA TCCGGACGC GCAAG GCGTCCGGA CGTTTTGTTATGACT RPD_3426 3810051 - 3809515 - | PRC-barrel TERM 3094 3810222 - 3810248 + r 71 -10.8 -3.41745 | opp_overlap 3810212 3810222 CACGACGCGGCAAAA CATCCCCGCCAC GAT GTGACGAGGATG TTGGTGTTCTCAACA TERM 3095 3810248 - 3810222 - R 95 -15.2 -4.10161 | opp_overlap 3810222, overlap 3810212 CACGACGCGGCAAAA CATCCCCGCCAC GAT GTGACGAGGATG TTGGTGTTCTCAACA RPD_3427 3811897 - 3810410 - | hypothetical protein TERM 3096 3811262 - 3811243 - G 71 -3.4 -4.64676 | overlap 3811245 3811255 3811258 GCACGCCGAACAAAA CCCATCGC AACA GCAGCGGG AGGCGGCGTGTCGGC TERM 3097 3812028 - 3811992 - H 100 -18.7 -4.03413 | opp_overlap 3811980 3812021, overlap 3812003 AGGCCGCGACAGAAA TGCCCACACCACCGCGC AAA GCGCAGTGGCGCGCGCA TTCGCGCGGGTTGTG TERM 3098 3813172 - 3813188 + G 75 -9.3 -4.08394 | ATCGTCGAGATCGGC GCCGGGC TGC GCCCCGC TTTTCCCGACAATCT RPD_3428 3812239 - 3813348 + | glycine oxidase ThiO RPD_3429 3813345 - 3813536 + | thiamine biosynthesis protein ThiS TERM 3099 3814501 - 3814555 + G 73 -11.3 -3.75629 | gap 2 CGCGCGCCTTCCGGC TCGCGGTCGACGCCGGCCGCCTGGGCT ATC AGGCCGGGCTGATGG-G-CGCCCGCGA TTTCGCTTCCCCCTC thiG 3813831 - 3814613 + | thiazole synthase RPD_3431 3814600 - 3815208 + | thiamine-phosphate pyrophosphorylase RPD_3432 3815473 - 3817398 + | thiamine biosynthesis protein ThiC TERM 3100 3817458 - 3817491 + T 86 -15.3 -3.62046 | opp_overlap 3817463 3817464, overlap 3817459 3817464 GGACATCCATCTGAG ACAAAGCGGCCGGGC GAAA GCCCGGCTGTTTTGC TTATTCCACAGGTCA TERM 3101 3817459 - 3817490 + T 87 -18.8 -2.77013 | opp_overlap 3817463 3817464, overlap 3817458 3817464 GACATCCATCTGAGA CAAAGCGGCCGGGC GAAA GCCCGGCTGTTTTG CTTATTCCACAGGTC TERM 3102 3817486 - 3817463 - T 76 -9.4 -4.05033 | opp_overlap 3817459 3817458 3817464, overlap 3817464 TCCATCTGAGACAAA GCGGCCGGGC GAAA GCCCGGCTGT TTTGCTTATTCCACA TERM 3103 3817485 - 3817464 - T 71 -12.9 -3.02698 | opp_overlap 3817459 3817458 3817464, overlap 3817463 CCATCTGAGACAAAG CGGCCGGGC GAAA GCCCGGCTG TTTTGCTTATTCCAC TERM 3104 3817464 - 3817485 + T 100 -15.1 -4.56133 | opp_overlap 3817464 3817463, overlap 3817459 3817458 CCATCTGAGACAAAG CGGCCGGGC GAAA GCCCGGCTG TTTTGCTTATTCCAC RPD_3433 3818338 - 3817559 - | hypothetical protein RPD_3434 3819143 - 3818910 - | hypothetical protein TERM 3105 3819115 - 3819101 - G 77 -5.6 -4.60797 | opp_overlap 3819102, overlap 3819102 GCGTGAGATACAAAA GCGCCA GCG TGGCGT CGTCGATCTTGTCGG TERM 3106 3819512 - 3819557 + H 73 -8.2 -4.08945 | gap 1, opp_overlap 3819506 CAGATACCACGTTCG CCGCGCT-TGGTGCGGACGGC GAGCA GCCGCTCGCGTTGCAGCGTGG TTTTGACGAAATGCT RPD_3436 3819600 - 3819983 + | hypothetical protein TERM 3107 3821057 - 3821039 - T 72 -7.3 -4.20918 | opp_overlap 3821046 3821052 CCGAAGCCGAACAAA CGCCGCG GTGGG CGCGCCG AACGAGGCGTTGCGC TERM 3108 3821331 - 3821373 + T 74 -12.1 -3.41745 | opp_overlap 3821361 3821362, overlap 3821332 3821334 3821366 TGCCACCGGTTTGGA CCG-GCGCCTCGGGTCTTGAT GGA ATCA-GAACCGAGGCGCTCGA TTGATGTTCTGGCGC TERM 3109 3821332 - 3821372 + T 77 -15.6 -2.64726 | opp_overlap 3821361 3821362, overlap 3821331 3821334 3821366 GCCACCGGTTTGGAC CG-GCGCCTCGGGTCTTGAT GGA ATCA-GAACCGAGGCGCTCG ATTGATGTTCTGGCG TERM 3110 3821334 - 3821369 + T 83 -17 -2.61226 | gap 1, opp_overlap 3821361 3821362, overlap 3821332 3821331 3821366 CACCGGTTTGGACCG GCGCCTCGGGTCTTGAT GGA ATCA-GAACCGAGGCGC TCGATTGATGTTCTG RPD_3437 3821857 - 3821432 - | hypothetical protein TERM 3111 3822503 - 3822531 + G 78 -13.8 -3.53224 | overlap 3822507 GCTCGGGTTCGAGAT TCCGGGGCGCGC TCGCC GCGCGCCCTTGA TTTCCAGACCCGCTC TERM 3112 3822507 - 3822527 + G 83 -15.4 -3.51232 | overlap 3822503 GGGTTCGAGATTCCG GGGCGCGC TCGCC GCGCGCCC TTGATTTCCAGACCC RPD_3438 3822059 - 3822625 + | endoribonuclease L-PSP TERM 3113 3822757 - 3822740 - f 79 -9.1 -4.11692 | opp_overlap 3822747 3822753 GATCGATGGGTAAAA CCCGCGT CCAG ACGCAGG TCCGGCTTTGAGCGG RPD_3439 3822817 - 3823830 + | hypothetical protein TERM 3114 3823849 - 3823898 + F 79 -11.5 -3.9281 | gap 1, overlap 3823852 3823855 GGCCGCGGAATTTCA GGACTG-GAGCAGGATGACTTATC CTC GAATCGTCATCCTGCTCTCGGTTC TTGTTTGAGCGTGAT TERM 3115 3823852 - 3823895 + F 76 -9.6 -4.08958 | gap 1, overlap 3823849 3823855 CGCGGAATTTCAGGA CTG-GAGCAGGATGACTTATC CTC GAATCGTCATCCTGCTCTCGG TTCTTGTTTGAGCGT TERM 3116 3823926 - 3823936 + F 76 -8.2 -4.12188 | opp_overlap 3823926, overlap 3823913 GATCTTCTCCGAAAA GCGG TGT CCGC TTTTCGGGATCATGC TERM 3117 3823936 - 3823926 - f 73 -8.2 -4.07885 | opp_overlap 3823926 3823913 GATCTTCTCCGAAAA GCGG TGT CCGC TTTTCGGGATCATGC TERM 3118 3823957 - 3823979 + F 95 -12.7 -4.35524 | GGGATCATGCTCTGA CAGTGCGGC GCCGA GCCGCGCTG TTTTCAATTTGACAG RPD_3440 3824062 - 3825243 + | putative cytochrome P450 TERM 3119 3825630 - 3825661 + G 79 -10.8 -3.96068 | gap 1 AAGTCGCACTCGATC GC-GAAGGCGGCGCC GAC GGCCGCGCCTTCAGC TTGTTGTTCAACTAC RPD_3441 3825464 - 3826090 + | SOUL heme-binding protein TERM 3120 3826267 - 3826251 - g 88 -15.1 -3.91897 | TTCCCGACCCACAAA GCGGCGG CGG CCGCCGC GGCGCGCGCCGCCAA RPD_3442 3826158 - 3826403 + | hypothetical protein RPD_3443 3826529 - 3827005 + | hypothetical protein RPD_3444 3827119 - 3827670 + | hypothetical protein TERM 3121 3827668 - 3827705 + T 89 -12.7 -4.20084 | TCACGCCGCACGACC TGACGACGCGTATCCGC AATC GGAGATACGCGCCGTCA TTTTCAATCAGTCGT RPD_3445 3828195 - 3827713 - | bacterioferritin RPD_3446 3828345 - 3828587 + | hypothetical protein TERM 3122 3828650 - 3828688 + F 76 -9.5 -4.07568 | gap 1, overlap 3828670 3828684 TTCCAAACTCGCCCG GCCGGCTTGAT-CTCGCG CAAG CGCGCGCATCATGCCGCC TTTTCCGACGCGGCG RPD_3447 3828994 - 3829302 + | hypothetical protein TERM 3123 3829505 - 3829490 - f 75 -11.8 -3.61894 | AATTTTCGTCAACAA GCGCCG GTCG CGGCGC CACTCTGGAGAGACA RPD_3448 3829522 - 3829806 + | hypothetical protein TERM 3124 3829861 - 3829882 + T 100 -17.3 -4.77757 | opp_overlap 3829861 TTCCTGAATTCGAAA CCCGGCCGA GCGA TCGGCCGGG TTTTCATTTTTGCAG TERM 3125 3829882 - 3829861 - T 100 -17.3 -3.66178 | opp_overlap 3829861 TTCCTGAATTCGAAA CCCGGCCGA GCGA TCGGCCGGG TTTTCATTTTTGCAG RPD_3449 3831255 - 3829927 - | lytic murein transglycosylase TERM 3126 3829983 - 3829995 + g 85 -7.7 -4.72272 | opp_overlap 3829976 GCCAGCAATCGAGCT TCAGC CGA GCTGA TTTTTGATAGGCGCC RPD_3450 3831829 - 3831236 - | hypothetical protein RPD_3451 3832719 - 3831949 - | trans-aconitate 2-methyltransferase RPD_3452 3834664 - 3833015 - | putative ABC transporter ATP-binding protein RPD_3453 3834898 - 3835104 + | hypothetical protein TERM 3127 3835181 - 3835144 - T 90 -17.9 -2.98181 | opp_overlap 3835149, overlap 3835149 CAAAGCCAAGCAAAG CAAAATGCCCGCGCAGA TCGC TCTACGCGGGCATTTTC TGATCGAGGATCGCT TERM 3128 3835149 - 3835176 + T 100 -15.6 -4.46212 | opp_overlap 3835144 3835149 CCAAGCAAAGCAAAA TGCCCGCGCAGA TCGC TCTACGCGGGCA TTTTCTGATCGAGGA TERM 3129 3835176 - 3835149 - T 100 -17.8 -4.62054 | opp_overlap 3835149, overlap 3835144 CCAAGCAAAGCAAAA TGCCCGCGCAGA TCGC TCTACGCGGGCA TTTTCTGATCGAGGA RPD_3454 3836432 - 3835200 - | ErfK/YbiS/YcfS/YnhG RPD_3455 3836872 - 3836627 - | hypothetical protein TERM 3130 3836811 - 3836821 + g 83 -8.2 -4.59773 | opp_overlap 3836797, overlap 3836791 AGCTCTGATTCGCAG CGCG CGT CGCG TTTTTGCCCGTCGAA TERM 3131 3837174 - 3837138 - H 71 -5.8 -4.27316 | gap 2, overlap 3837142 CGCCCGAACCGAAAA TGC-AGGACGGC-GAGCC CAT GGCGCAGCCGCCGTTGCA ATCGGCGGATCTCAG TERM 3132 3837669 - 3837651 - g 72 -6.7 -4.18018 | gap 1, overlap 3837652 GCGCGCCAGCCAAAA TCG-CGGC GCCC GCCGGCGA CCAACCGGTCGCGCC RPD_3456 3837155 - 3837859 + | hypothetical protein RPD_3457 3838774 - 3837917 - | 3-mercaptopyruvate sulfurtransferase RPD_3458 3839310 - 3838888 - | rhodanese-like protein RPD_3459 3840592 - 3839357 - | hypothetical protein RPD_3460 3840700 - 3842634 + | GGDEF domain-containing protein RPD_3461 3842737 - 3842991 + | transglycosylase-associated protein RPD_3462 3843096 - 3843938 + | ATPase RPD_3463 3844322 - 3844038 - | hypothetical protein RPD_3464 3845052 - 3844438 - | GCN5-related N-acetyltransferase TERM 3133 3845195 - 3845156 - R 78 -6.4 -4.56597 | gap 2, overlap 3845159 3845160 3845163 CGCGCGGCTCAAAAA CAACCGACCCCGCCCGGG ACATGG CCCGGGCGCGAT-GGC-G AACAAGTCGGCGTCC TERM 3134 3845193 - 3845159 - R 95 -11.4 -4.40561 | gap 1, overlap 3845156 3845160 3845163 GCGGCTCAAAAACAA CCGACCCCGCCCGGG ACATGG CCCGGGCGCGAT-GG CGAACAAGTCGGCGT TERM 3135 3845193 - 3845160 - R 70 -11.6 -3.23855 | overlap 3845159 3845156 3845163 CGGCTCAAAAACAAC CGACCCCGCCCGGG ACATGG CCCGGGCGCGATGG CGAACAAGTCGGCGT RPD_3465 3846149 - 3845220 - | senescence marker protein-30 (SMP-30) RPD_3466 3846652 - 3846302 - | hypothetical protein RPD_3467 3846766 - 3847050 + | excinuclease ABC subunit C TERM 3136 3847268 - 3847296 + T 70 -10.2 -3.58343 | opp_overlap 3847266 3847290 CAAAATGATTAATCC GCCGCCCTGAGC CAGGA GATCAGCGCGGC TTTCGGCGTCATGAA RPD_3468 3849400 - 3847622 - | radical SAM family protein TERM 3137 3849055 - 3849026 - G 70 -10 -3.63627 | gap 1 GCCCGAGACGTGAAA GCCGCCGATG-AC GACCT GCACACCGGCGGC GCGAAACGGCCGGGC TERM 3138 3849551 - 3849567 + r 83 -8 -4.56597 | TGCTGCGGTGACCAG TTGCGG AAATG CCGCAA TTTTTCGACCAAAAC RPD_3469 3849942 - 3849673 - | hypothetical protein RPD_3470 3850415 - 3849939 - | glutathione peroxidase RPD_3471 3851829 - 3850432 - | amidase RPD_3472 3852154 - 3851897 - | hypothetical protein RPD_3473 3852277 - 3853266 + | proline iminopeptidase TERM 3139 3854633 - 3854623 - g 79 -6.8 -4.63932 | overlap 3854624 3854625 CAGCCTCGAAGAAAA CGTC GAC GACG CCCGCGCGGCGTTGA TERM 3140 3854977 - 3854965 - g 75 -9.1 -4.13767 | CGCCGCAGCGGAAAA GGCGA AGC TCGCC GACTACGCGGAGTTC TERM 3141 3856198 - 3856237 + G 70 -13.4 -3.06133 | opp_overlap 3856191, overlap 3856230 GCAGACGATGCGGCT CGCGGTGCGCGACGCCAG GCAT CTGGCGACCTGCGCCGAG TTCGGTCCGCGCTTC RPD_3474 3853655 - 3856507 + | bifunctional transaldolase/phosoglucose isomerase TERM 3142 3856543 - 3856517 - f 74 -11.6 -3.44794 | gap 1, overlap 3856520 3856534 AACTGACGACGACAA CGAGGCTCCGC ACCCAA GCGGAGCC-CG GCAACATCGGAGATC TERM 3143 3856541 - 3856520 - f 70 -13 -2.87243 | overlap 3856517 3856534 TGACGACGACAACGA GGCTCCGC ACCCAA GCGGAGCC CGGCAACATCGGAGA RPD_3475 3856565 - 3857605 + | 6-phosphogluconate dehydrogenase-like protein RPD_3476 3857602 - 3859113 + | glucose-6-phosphate 1-dehydrogenase TERM 3144 3859745 - 3859772 + G 82 -17 -3.01712 | opp_overlap 3859737, overlap 3859738 CGAGCAAGCGCGACA TCGTCGGCCGCG TCTT CGCGGGCGACGA TCTTCCGGCCGGCCA RPD_3477 3859114 - 3859860 + | 6-phosphogluconolactonase TERM 3145 3859940 - 3859911 - g 81 -10.7 -4.07568 | gap 1, opp_overlap 3859929, overlap 3859914 3859927 CCGGCTCCGGCAAAA GCACGATCGGCGAA CAG CTCGCCGAGCG-GC TCGGCTGGGCCTATC RPD_3478 3859886 - 3860389 + | carbohydrate kinase, thermoresistant glucokinase RPD_3479 3860389 - 3861201 + | Cof protein TERM 3146 3861203 - 3861216 + T 75 -4.5 -4.78752 | opp_overlap 3861196, overlap 3861210 ACGACAAAGGCTGAC GTTCC GCCT GGAGC TTTTTCGGTTCTGAT RPD_3480 3863125 - 3861320 - | glycoside hydrolase 15-related RPD_3481 3865088 - 3863115 - | 4-alpha-glucanotransferase TERM 3147 3864741 - 3864711 - G 70 -10.3 -3.737 | gap 1 GAACGCGCCACCAAA CGCGCC-CGGCGGG GCGA CCAGCAGCGGCGCG TCCTCGGTCCGGCCG RPD_3482 3865277 - 3867232 + | alpha amylase, catalytic region TERM 3148 3867766 - 3867789 + G 70 -6 -4.19746 | gap 1, overlap 3867763 ACCTGGGATCCCGAG GCCG-GCCAAT ATT ATTGGCACCGC TTCTTTTCGCATCAG RPD_3483 3867244 - 3870546 + | trehalose synthase-like RPD_3484 3870543 - 3872693 + | glycogen branching enzyme TERM 3149 3874115 - 3874099 - g 84 -13.7 -3.93489 | overlap 3874094 CAACGAGAAACACAA CCTCGCC AAT GGCGAGG ATAATCGCGACGGCT RPD_3485 3872696 - 3874774 + | glycogen debranching protein GlgX TERM 3150 3875876 - 3875918 + G 77 -7.6 -4.36914 | gap 1, opp_overlap 3875859, overlap 3875878 3875878 3875880 GCGGCGGGCAGCCGC GGGGCG-AGCCGAGCGGCG AATTGC CGCCGCTCGCCTTCGTCAA TTTTCTGCAGAACCA TERM 3151 3875878 - 3875910 + G 75 -14.2 -3.28857 | gap 2, overlap 3875878 3875876 3875880 GGCGGGCAGCCGCGG GGCGAGCCGAGCGGCG AAT TGCCGC-CG-CTCGCC TTCGTCAATTTTCTG TERM 3152 3875878 - 3875916 + G 71 -14.6 -2.52946 | gap 1, overlap 3875876 3875878 3875880 GGCGGGCAGCCGCGG GGCG-AGCCGAGCGGCG AATTGC CGCCGCTCGCCTTCGTC AATTTTCTGCAGAAC RPD_3486 3874771 - 3876534 + | malto-oligosyltrehalose trehalohydrolase TERM 3153 3877842 - 3877870 + G 72 -11.6 -3.61398 | opp_overlap 3877831, overlap 3877843 3877861 TTCACCGTGCTGACC CGGCTGCTGGCG CGGAT CGCCGGCGGCCA TTATTCGACGCGGGA TERM 3154 3877843 - 3877869 + G 72 -15.1 -2.76696 | opp_overlap 3877831, overlap 3877842 3877861 TCACCGTGCTGACCC GGCTGCTGGCG CGGAT CGCCGGCGGCC ATTATTCGACGCGGG TERM 3155 3878669 - 3878690 + G 70 -8.6 -3.89822 | CATCGACCGCATTCT CGACCCGG CGCAAT CCGGGCCG TTTCTGGAATCGCTG RPD_3487 3876534 - 3879323 + | malto-oligosyltrehalose synthase TERM 3156 3879385 - 3879345 - T 76 -7.4 -4.37067 | opp_overlap 3879344, overlap 3879347 CAAACAGCAGGAAAA TAGCAAGGCCGCCCGG GATCTTGGG CCGGACGGCCTGGCGG GTCTCGTGCCGACCA TERM 3157 3879383 - 3879347 - T 88 -14.4 -3.77413 | opp_overlap 3879344, overlap 3879345 AACAGCAGGAAAATA GCAAGGCCGCCCGG GATCTTGGG CCGGACGGCCTGGC GGGTCTCGTGCCGAC RPD_3488 3879841 - 3879533 - | hypothetical protein RPD_3489 3880018 - 3880182 + | hypothetical protein ligD 3882992 - 3880200 - | ATP-dependent DNA ligase TERM 3158 3882907 - 3882889 - G 83 -13.8 -3.78775 | TTCTGGATCACGAAA CGCCGCCG CTT CGACGGCG CGACCTTGCCATCGC TERM 3159 3883047 - 3883035 - H 71 -4.7 -4.4078 | opp_overlap 3883019 GCGCCGGAACCAAAA CCCGG CGC CTGGG TTGAAGTTCCCGACC TERM 3160 3884002 - 3883978 - g 70 -3.6 -4.56597 | gap 2, opp_overlap 3884001, overlap 3883979 3883980 3883982 TCGTTCCGCTAAAAA GGCA--CACCGA TCG TCGGCGCGTGCC CGCAAGGCGAGTTGA RPD_3491 3883133 - 3884017 + | hypothetical protein RPD_3492 3884624 - 3884259 - | hypothetical protein TERM 3161 3884339 - 3884349 + g 86 -4.6 -5.12068 | overlap 3884319 TGCGTGACGTCGTCT TGCG GGC CGCG TTTTTCTTCGCTGTC RPD_3493 3884972 - 3884688 - | SirA-like mobA 3885050 - 3885682 + | molybdopterin-guanine dinucleotide biosynthesis protein A RPD_3495 3886735 - 3885683 - | alcohol dehydrogenase GroES-like protein TERM 3162 3885905 - 3885881 - G 76 -14.9 -3.15544 | CCGCATCGGGATGAA CGGCAGCGCCC ATG GCGCGCCGCCG CCGAACAGCCCGACG RPD_3496 3887779 - 3886814 - | 2-nitropropane dioxygenase, NPD TERM 3163 3887945 - 3887894 - R 84 -15.8 -3.28712 | gap 1, opp_overlap 3887891 CTCCCTTCGCCACAA CTGCGAGATTCCGGGTTCGCGCAGC GCC GCTGCGCGC-CCCGGAATGACACTG TAGATGTTCCGCGCG RPD_3497 3888846 - 3887980 - | urease accessory protein UreF TERM 3164 3888234 - 3888205 - G 73 -14.3 -3.18582 | gap 1, overlap 3888192 CACCGCATGCAGGAA GGCGTGCAGCGTCG CGG CGA-GCGGCACGCC ATGCGTGGCGCTGAC RPD_3498 3889771 - 3889472 - | antibiotic biosynthesis monooxygenase RPD_3499 3890098 - 3889799 - | antibiotic biosynthesis monooxygenase TERM 3165 3890106 - 3890116 + r 84 -2.4 -5.37043 | TAGATCACGAATATT CCTC CCG GTGG TTTTTTCTATAGCGT TERM 3166 3890230 - 3890185 - R 82 -2.8 -5.18726 | gap 3, opp_overlap 3890189, overlap 3890186 3890187 3890189 3890215 3890223 GCGTCAGAACAAAAA GTGAGAGC---TCTGGTTCTGAT TCG ATCAGAACCAGAAAAGCTCTGGC GCAAGCGCCGGGCGG TERM 3167 3890243 - 3890223 - R 74 -4.6 -4.59069 | gap 1, overlap 3890187 3890189 3890186 3890215 3890185 ATCAGAACCAGAAAA GCTCTGGCG CAAG CGCCGG-GC GGACAATAGGCGCTG TERM 3168 3890295 - 3890344 + r 100 -12.2 -4.56597 | gap 2, opp_overlap 3890277 3890330 CCGCGCCGCTGACCA CCCGTC-ATTCCGGG-GCGCTCGC AGCA GCGAGCGAACCCGGAATCGAGAGG TTTTTGCGACGGCAC ureC 3892158 - 3890446 - | urease subunit alpha RPD_3501 3892564 - 3892172 - | PilT protein-like RPD_3502 3892845 - 3892561 - | transcriptional regulator AbrB ureB 3893205 - 3892891 - | urease subunit beta ureA 3893517 - 3893215 - | urease subunit gamma RPD_3505 3894434 - 3893583 - | urease accessory protein UreD TERM 3169 3893616 - 3893664 + g 77 -16 -3.01712 | opp_overlap 3893597 3893592 AGGCAGCGCGCGGCC CGCGGCGCGGCGTA-GCACCGCCA TCA TGTCGGCGCGTA-GCCGCGCCGCA TCTTGGGCGCAGAAC TERM 3170 3894211 - 3894232 + g 70 -12.9 -3.01712 | opp_overlap 3894208 ATGCTGAACCGATCG CCGCCGGCG ACGC CGCCCGCGG TGTTGACCAGCACAG RPD_3506 3895166 - 3894471 - | ABC transporter related TERM 3171 3894934 - 3894908 - G 78 -5.9 -4.63527 | gap 2, overlap 3894910 TGAGCAGCGGAAAAA TCTCGC-GGC-CC TGC GGCACCAGCGAGA TGCCGCGCCGCGCCC RPD_3507 3896124 - 3895360 - | ABC transporter related RPD_3508 3897314 - 3896121 - | inner-membrane translocator RPD_3509 3899304 - 3897676 - | inner-membrane translocator TERM 3172 3899352 - 3899389 + r 100 -21.4 -3.03124 | gap 1 CGTAGCTTCGAAGGC GGAGAGGGCGGCG-CGC AACCG GCGTCGTCGCCCTCTCC TGTTGGGACGTCAGC RPD_3510 3900769 - 3899447 - | twin-arginine translocation pathway signal TERM 3173 3902554 - 3902521 - g 70 -13.1 -3.05384 | gap 1 TGCGCCCGGATCGAA CGGCCCG-CGGCGC CGACGTC GCGCCGGCGGCCCG ACGACCGGACGCCAT RPD_3511 3901271 - 3902719 + | DEAD/DEAH box helicase-like TERM 3174 3902803 - 3902839 + G 70 -13 -3.05384 | opp_overlap 3902837 ATCCTTCCCGACGCG CGGTATCGTGTCCAGC TGGAC GCCGGACACGAGATCG TTGCCTACACCGCAG RPD_3512 3902743 - 3903027 + | translation initiation factor IF-1 TERM 3175 3903081 - 3903053 - f 87 -17.5 -2.8844 | GGATACCACACGACA TGCGCTTTGCCGT TCC ACGGCAAAGCGCC CTCCGTCAAGTTGCG RPD_3513 3903311 - 3903523 + | cold-shock DNA-binding domain protein TERM 3176 3903550 - 3903570 + T 100 -15.4 -6.02919 | opp_overlap 3903546 GGTTGAGGATACCGA GGCCGCGC CGACA GCGCGGCC TTTTTTTGTTTCTGA RPD_3514 3904289 - 3903663 - | TadE-like TERM 3177 3903866 - 3903900 + g 77 -10.1 -3.95725 | gap 1 TCACCGTATCTCCTG GCTTG-CGCGACGA AACTTCGA TCGTCGCGACAGGC TTGTTGTTGCCGCTT RPD_3515 3904843 - 3904298 - | TadE-like TERM 3178 3904779 - 3904742 - G 77 -12.2 -3.63991 | gap 2, opp_overlap 3904738 CAGCAGGCCGAAGAA GATCGGC-GCGATC-AGC GCGA ACTCGATCGCCGCCGATC CTCGTCGGTTGCGGC RPD_3516 3905520 - 3905035 - | hypothetical protein RPD_3517 3905825 - 3906061 + | Flp/Fap pilin component TERM 3179 3906085 - 3906104 + F 100 -12.8 -5.26875 | opp_overlap 3906062 3906063 3906085 TAAGCCTTCAATCAA GGCCTCGG CGAA CCGGGGCC TTTTTTGATTCCCGC RPD_3518 3906390 - 3906914 + | peptidase A24A, prepilin type IV TERM 3180 3906940 - 3906929 - f 70 -7.2 -4.07535 | opp_overlap 3906929 3906928 AAGCGCGAGAAACAA CGCG TTAA CGCG ATTTAGATACGCCTC RPD_3519 3907039 - 3907839 + | Flp pilus assembly CpaB TERM 3181 3908714 - 3908728 + G 75 -11.4 -3.66178 | GAACCGGCGAGCTTC CTCGCC GGC GGCGAG TTTCCCGTTCCAAGC RPD_3520 3907853 - 3909295 + | type II and III secretion system protein RPD_3521 3909315 - 3910046 + | Type IV pili component-like RPD_3522 3910043 - 3911320 + | putative pilus assembly protein cpaE RPD_3523 3911342 - 3912790 + | type II secretion system protein E TERM 3182 3912982 - 3912965 - g 77 -10.5 -3.92542 | overlap 3912969 GGCAGGTCGAAAGAA CGCAGCG CTCG CGCCGCG AGCAGGTCGAAGGAT TERM 3183 3913271 - 3913233 - g 77 -13.1 -3.61398 | CGGCTTCCTGAAGAA GCGTCGGGAAAAGCGAT TCCTC AACGCCCTGCCCGACGC CGTCGACGTGATCGT RPD_3524 3912805 - 3913779 + | type II secretion system protein TERM 3184 3914532 - 3914507 - g 74 -7.5 -4.26076 | gap 1 GCAGGCCTACGAAAA CCTCGCGATCCG CAC CGG-CCTCGAGG GCGTCAAGTCGGTCT RPD_3525 3913791 - 3914765 + | type II secretion system protein RPD_3526 3915707 - 3914862 - | tetratricopeptide TPR_2 TERM 3185 3915802 - 3915823 + G 77 -10.1 -3.95584 | overlap 3915803 TCGTTCGCCACTGCC CCGGAACCG ACCG CGGTTCCGA TTTCCTTCGTCACCA TERM 3186 3915803 - 3915822 + G 70 -13.6 -2.97029 | overlap 3915802 CGTTCGCCACTGCCC CGGAACCG ACCG CGGTTCCG ATTTCCTTCGTCACC TERM 3187 3915874 - 3915842 - g 85 -10.3 -4.25104 | opp_overlap 3915865 3915866 CCTTCGTCACCAAAA CCGGCTGGGAGGCGC TGT GCGCGACGCTGCCGG AGGCCGCGCAGCGGT RPD_3527 3915781 - 3917160 + | leucyl aminopeptidase TERM 3188 3917263 - 3917290 + G 75 -9.1 -4.07885 | gap 1, opp_overlap 3917259 CTCCGAGATCAGCTA CGGCGTGGCGCC CATGC GGCGCGA-GCCG TTTTCCGGCGCGATG RPD_3528 3917153 - 3918004 + | NLP/P60 RPD_3529 3918626 - 3917988 - | nucleoside diphosphate pyrophosphatase TERM 3189 3918517 - 3918472 - G 80 -17.5 -2.78384 | gap 1, opp_overlap 3918476, overlap 3918431 CTGGCGCGCAGCACA TCCCGCCGCTGCAGCAGCGGCG GCT CGCCGTCGC-GCCGCAGCGAGA CTTCGTACCGCTCAT RPD_3530 3920271 - 3918634 - | ABC transporter related TERM 3190 3918984 - 3918929 - G 77 -11 -3.80573 | gap 1, opp_overlap 3918963 TCGAGCACGACGAAA TTCGGC-TCCAGCACCACCGCACGCGC GAT GCTGATGCGCTGGCGCTGGCCGCCGGA GAATTCGTGCGGATA RPD_3531 3920759 - 3920271 - | PilT protein-like RPD_3532 3922185 - 3921007 - | binding-protein-dependent transport systems inner membrane component TERM 3191 3922133 - 3922100 - G 83 -13.8 -3.86897 | overlap 3922101 TTCAGCGGCGAGAAA CCGAGGCGGTGGCG GGCGGG CGGCACCGCCTCGC CGAGCGGCGCCTGAA TERM 3192 3922132 - 3922101 - G 82 -17.3 -2.91924 | overlap 3922100 TCAGCGGCGAGAAAC CGAGGCGGTGGCG GGCGGG CGGCACCGCCTCG CCGAGCGGCGCCTGA RPD_3533 3923294 - 3922185 - | binding-protein-dependent transport systems inner membrane component TERM 3193 3922329 - 3922280 - G 85 -5.2 -5.1101 | overlap 3922286 CGACCAGCGAAAAAA TGAACAGCGTGCCGAA-CACCACC GGGT AATCGCGGTTCAGCACGCT-TTCA AAGCCGAGCAGGCCG TERM 3194 3923319 - 3923339 + r 70 -10.4 -3.59979 | gap 1 CTCGCCTTTGACGTC GCCGTCGGC GGCG GCCG-CGGC TTTCGGCTCCGACCA RPD_3534 3925175 - 3923295 - | extracellular solute-binding protein RPD_3535 3927085 - 3925190 - | twin-arginine translocation pathway signal TERM 3195 3927265 - 3927246 - R 100 -16.4 -4.84359 | opp_overlap 3927246 TGACGCGCACAAAAA CGGCCGGG AAAT CCCGGCCG TTGGTCGACGTGACG TERM 3196 3927246 - 3927265 + r 86 -16.4 -3.15544 | opp_overlap 3927246 TGACGCGCACAAAAA CGGCCGGG AAAT CCCGGCCG TTGGTCGACGTGACG RPD_3536 3927850 - 3927299 - | cytochrome c, class I TERM 3197 3927776 - 3927761 - G 72 -8.2 -4.07568 | CTTGCCGGGCGAAAA CACCGC CTGC GCGGCG AAGTTCGACAGCAGC RPD_3537 3928064 - 3928801 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 3198 3929399 - 3929457 + G 71 -2.9 -4.66938 | opp_overlap 3929386 3929383 AACACCACCCGCTTC GTGATG-CTGGCGCGCGAGCCGCGCTGGG CGG CGCAGGG-GTCGGGCGCGCTGGTCACCAC TTTTGTATTCCGGGT RPD_3538 3928871 - 3929725 + | prephenate dehydratase TERM 3199 3929843 - 3929892 + T 86 -12.7 -3.99405 | gap 1, overlap 3929826 3929886 CGGCGGTTACTTGCG GCCG-CATCCTTCGAGGCCGCCGC GTC GCGGCGGCGCCTCAGGATGACGAC TTTGTCATACGTTGC RPD_3539 3930954 - 3929938 - | luciferase-like TERM 3200 3931064 - 3931047 - H 76 -12.7 -3.53012 | TTGCTGGTGGGCAAA CCTCGGG GAGG CCCGAGG TCACCCACTCCGCCA TERM 3201 3932137 - 3932106 - g 73 -10.8 -3.63627 | gap 1, overlap 3932107 TCCCGACACCCGAAA GCTGG-TGGCGGCGA CGG TCGCCGCCGGCCAGG TTCACAAGCTCGCCA RPD_3540 3931375 - 3932262 + | 5,10-methylenetetrahydrofolate reductase TERM 3202 3934534 - 3934489 - g 71 -12.5 -3.31461 | gap 1, overlap 3934490 CATGGAGGCCGAGAA GGCCGCGCAGCTCGCCGCCG GCACCCA CACCGGCGAGC-GCGCCACC GCCGGCAAGATCGTG metH 3932267 - 3936148 + | B12-dependent methionine synthase RPD_3542 3936319 - 3936708 + | hypothetical protein TERM 3203 3936773 - 3936753 - T 70 -10.4 -3.63782 | opp_overlap 3936755, overlap 3936746 GAAGATCAGCGCAAA GCGCGTCA TCCGC CGACGCGC GCGAAGAAATGGCGG RPD_3543 3937783 - 3937190 - | GCN5-related N-acetyltransferase RPD_3544 3939307 - 3937805 - | glycerol kinase TERM 3204 3938843 - 3938872 + g 71 -14.9 -2.57132 | opp_overlap 3938836 3938833, overlap 3938842 GAACATCAGCTCGCC GCGCTCGGCGCGT CCGC GCGCGCCGGGCAC ATTGTCGAGCAGCCA RPD_3545 3940362 - 3939652 - | regulatory protein, LuxR RPD_3546 3941583 - 3940531 - | hypothetical protein RPD_3547 3942075 - 3943775 + | chemotaxis sensory transducer TERM 3205 3943880 - 3943830 - T 91 -16.2 -3.62775 | opp_overlap 3943842, overlap 3943833 ATCATGCTCTAACAA GAACCTAGAGCGGGATGACGATTC GAA GATGAGTCATCCTGCTCTAGGTCC GTCGCACCGATTTGA TERM 3206 3943877 - 3943833 - T 89 -14.3 -3.94877 | opp_overlap 3943842, overlap 3943830 ATGCTCTAACAAGAA CCTAGAGCGGGATGACGATTC GAA GATGAGTCATCCTGCTCTAGG TCCGTCGCACCGATT TERM 3207 3943975 - 3943953 - T 89 -16.3 -3.53444 | GGATCTTTTCCGAAA GCCGGCGTC CACTT GACGCCGGC TACACCGACGCGGTG RPD_3548 3944748 - 3943975 - | short-chain dehydrogenase/reductase SDR TERM 3208 3944742 - 3944767 + g 75 -4.7 -4.58786 | gap 1 GATCGAACGGGTTGG CAGTCATGGGCG GGG CTCCC-TGATTG TTTCTTGTTGTTGGT RPD_3549 3946070 - 3944928 - | acyl-CoA dehydrogenase-like TERM 3209 3946149 - 3946207 + r 90 -15.3 -3.72576 | gap 1, overlap 3946158 GGGATGCGCCCCTTG GGGCGCAGGCCCGGAATCCATATCCACC GTCA GG-GGTTATGGATTCCGGGTTCGCTCGC TTTGCTCGCGCCCCG TERM 3210 3946158 - 3946198 + r 93 -19.2 -3.11999 | gap 1, overlap 3946149 CCCTTGGGGCGCAGG CCCGGAATCCATATCCACC GTCA GG-GGTTATGGATTCCGGG TTCGCTCGCTTTGCT RPD_3550 3947453 - 3946263 - | acyl-CoA dehydrogenase-like TERM 3211 3947413 - 3947425 + g 83 -9.1 -4.34737 | AACGCCCGCACCTCG TCGCG AAA CGCGA TTTCTTCCTTGCTGA TERM 3212 3947552 - 3947595 + r 93 -16 -3.75292 | gap 1 ATCCGGCCTGAATCT CGGGATTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAATGACG TTGTTGGTCGTCAGT RPD_3551 3948793 - 3947606 - | Acetyl-CoA C-acyltransferase RPD_3552 3950470 - 3948818 - | AMP-dependent synthetase and ligase TERM 3213 3949586 - 3949546 - G 73 -14.8 -2.80816 | gap 1, overlap 3949548 TCGTCAGCGACGACA GATCGCGACTCTCCAGCGA CGGA TCGTTGGCGAG-CGCGATC CACATCGTCGGGACG RPD_3553 3952754 - 3950655 - | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 3214 3951680 - 3951725 + g 86 -16.8 -3.34242 | gap 2, opp_overlap 3951673, overlap 3951674 3951684 TGATCAGACCCATGC GCTTCGCCGGCGCGTCGGCCGG GATG CCG-CCG-CGCGCCGCCGTGGC TTCGTAGTTCTTCTG TERM 3215 3951684 - 3951721 + g 80 -17 -2.59035 | gap 2, opp_overlap 3951673, overlap 3951680 3951674 CAGACCCATGCGCTT CGCCGGCGCGTCGGCCGG GATG CCG-CCG-CGCGCCGCCG TGGCTTCGTAGTTCT TERM 3216 3952797 - 3952811 + H 71 -8.6 -3.91352 | opp_overlap 3952797 ATTGATCCGGATTAA TTTCGC ACT GCGAAA TTTAATTCCACATCT TERM 3217 3952935 - 3952916 - g 74 -2 -4.7254 | opp_overlap 3952918, overlap 3952918 3952920 ACGTCCGACCAAAAA GACAGCGA CCGA TCGCAGTT TCGTCGTCGCTCTGT RPD_3554 3952896 - 3953774 + | IclR family transcriptional regulator RPD_3555 3953838 - 3954635 + | ABC transporter related RPD_3556 3954632 - 3955345 + | ABC transporter related RPD_3557 3955357 - 3956235 + | inner-membrane translocator TERM 3218 3956393 - 3956369 - g 75 -11.5 -3.63515 | opp_overlap 3956368 3956371 GCTGATCGCCAAGAA CTTCGTCATCT TCC AGATGACGATG GTTCTGATCTACGCC TERM 3219 3956506 - 3956562 + G 82 -17.3 -2.93723 | overlap 3956524 3956540 3956557 CCTACACCTCGGCGA TCCTGATGGAGGTCGGCGGCGTCAA CTACGCT TTGACGCTGCCGGTCGCCGGCGGGA TCTGCTTCATCGCGG RPD_3558 3956238 - 3957248 + | inner-membrane translocator TERM 3220 3957270 - 3957246 - f 74 -5.8 -4.52803 | gap 1, opp_overlap 3957265, overlap 3957247 3957249 CACAAATTGAGAAAA TG-ATCCGTCA CACC TGACGGACGCA ACGACAAAAGGCCCC TERM 3221 3957265 - 3957321 + F 100 -23.2 -2.9914 | gap 1, opp_overlap 3957249 3957247 3957246 3957272 3957280, overlap 3957272 3957280 CCGTCACACCTGACG GACGCAACGACAAAAGGCCCCCCGCGA ATTC TCGCCGGGGGCCTTTT-TCGTTTCGGC TCTGTCTCCGGCGTC TERM 3222 3957272 - 3957314 + F 100 -21.5 -3.66139 | gap 1, opp_overlap 3957272 3957280, overlap 3957265 3957280 ACCTGACGGACGCAA CGACAAAAGGCCCCCCGCGA ATTC TCGCCGGGGGCCTTTT-TCG TTTCGGCTCTGTCTC TERM 3223 3957314 - 3957272 - f 100 -21.5 -3.07935 | gap 1, opp_overlap 3957272 3957265 3957280, overlap 3957280 ACCTGACGGACGCAA CGACAAAAGGCCCCCCGCGA ATTC TCGCCGGGGGCCTTTT-TCG TTTCGGCTCTGTCTC TERM 3224 3957280 - 3957307 + F 100 -18.4 -4.99134 | opp_overlap 3957272 3957280, overlap 3957272 3957265 GACGCAACGACAAAA GGCCCCCCGCGA ATTC TCGCCGGGGGCC TTTTTCGTTTCGGCT TERM 3225 3957307 - 3957280 - f 100 -18.4 -4.55491 | opp_overlap 3957280 3957272 3957265, overlap 3957272 GACGCAACGACAAAA GGCCCCCCGCGA ATTC TCGCCGGGGGCC TTTTTCGTTTCGGCT RPD_3559 3957460 - 3958716 + | extracellular ligand-binding receptor TERM 3226 3958803 - 3958777 - f 91 -19.4 -3.03124 | opp_overlap 3958778 CGGGACTCTGGAACA CGCCCCGGCGAC TCT GTCGCCGGGGCT TTTTGTTGCTGCAAG TERM 3227 3958778 - 3958802 + F 100 -22.9 -5.1356 | opp_overlap 3958777 GGGACTCTGGAACAC GCCCCGGCGAC TCT GTCGCCGGGGC TTTTTGTTGCTGCAA RPD_3560 3958898 - 3960133 + | extracellular ligand-binding receptor TERM 3228 3960275 - 3960304 + F 100 -16.5 -4.29227 | gap 1, opp_overlap 3960274 3960273, overlap 3960277 ATCGCCTAAATAATC G-GCCCCCGGCAAC GCT GTTGCCGGGGGTTC TTTGTTGCTGGTTCC TERM 3229 3960277 - 3960301 + F 100 -21.5 -4.25016 | opp_overlap 3960274 3960273, overlap 3960275 CGCCTAAATAATCGG CCCCCGGCAAC GCT GTTGCCGGGGG TTCTTTGTTGCTGGT TERM 3230 3960517 - 3960486 - g 72 -5.2 -4.30719 | gap 1, overlap 3960488 3960489 CTTGCCCAGAAGAAA TACGACCCCGGTGTC AGC GACACCGAAATCA-A GATCGGCAATGTCGA TERM 3231 3960516 - 3960488 - g 70 -10.3 -3.75817 | overlap 3960486 3960489 TGCCCAGAAGAAATA CGACCCCGGTGTC AGC GACACCGAAATCA AGATCGGCAATGTCG TERM 3232 3960561 - 3960587 + G 77 -13.7 -3.36991 | overlap 3960558 CCGGCCTCGGCTTAC GGCGTCATCGG CAAGA CCGAGGACGCC TATTTCAAGATGATC RPD_3561 3960396 - 3961625 + | extracellular ligand-binding receptor TERM 3233 3961685 - 3961659 - f 100 -19.4 -4.1822 | opp_overlap 3961659 TCGCACCGCAACAAA GCCCCCTGCGAC CTC GTCGCCGGGGGC TTTTTCTTGCTGCTC TERM 3234 3961659 - 3961685 + F 100 -19.4 -5.15167 | opp_overlap 3961659 TCGCACCGCAACAAA GCCCCCTGCGAC CTC GTCGCCGGGGGC TTTTTCTTGCTGCTC RPD_3562 3961790 - 3963019 + | putative leucine/isoleucine/valine-binding protein precursor TERM 3235 3963060 - 3963085 + T 100 -17.5 -5.1356 | CGATCTCACTCGAGA GCCCCGGACGC TTGC GCGCCCGGGGC TTTTTCTTGATCAAC RPD_3563 3963640 - 3963140 - | hypothetical protein TERM 3236 3963873 - 3963885 + G 72 -5.5 -4.43501 | TCGGCTTCGAACCGG CCACG ATT TGTGG TTTTGTCGCTACGTT RPD_3564 3963828 - 3966002 + | carbohydrate-selective porin OprB TERM 3237 3966005 - 3966049 + T 83 -14.8 -3.53444 | gap 1 AACGCAGTTTTGAGT GCCGCGCCAGCGTTCGG-GGC GGTC GCCGCCGCCCGCCGGCCCGGC TTTCGCCCGGCGTAG RPD_3565 3967253 - 3966081 - | peptidase M20D, amidohydrolase TERM 3238 3967316 - 3967295 - H 70 -13 -2.91264 | TTTCGTACTCAGATA CGGCAGGC TAGCCG GCCTGCCG CTTCACAGCAACTGT TERM 3239 3968138 - 3968189 + G 74 -15.2 -3.06302 | opp_overlap 3968130 TGCATAACGGTGTCA CCG-TCGAGGCCCGCGCGCGGCGC GAGGTG GTGCTGTGCGCCGGC-TCGATCGG TTCGATCCAGGTGCT RPD_3566 3967408 - 3969027 + | glucose-methanol-choline oxidoreductase RPD_3567 3970074 - 3969220 - | hypothetical protein RPD_3568 3971608 - 3970217 - | aminotransferase class-III TERM 3240 3971305 - 3971355 + g 72 -14.1 -3.02511 | opp_overlap 3971316 CCAGCACGCCGGCCA GCGT-CGAGACATCGAGCTGCACGA GGT TCG-GCAGCTCGCTGTCGAGCACGC TCTTCAGCGCATCGC TERM 3241 3971661 - 3971651 - R 73 -6.8 -4.27316 | opp_overlap 3971651 GTCGTCAACTCAAAA CGCA GCT TGCG GCGCTTTGCCCCGTT TERM 3242 3971733 - 3971712 - R 77 -2.3 -5.00616 | gap 1, overlap 3971713 TTCCGGCTGAAAAAA CTCAT-AGCG ACG CGCCGATGAA TGCCAGCACAACGCC TERM 3243 3971927 - 3971905 - R 70 -11.9 -3.18912 | opp_overlap 3971926, overlap 3971906 GCACGTAGCCATCAA TCGGGCCGG GCCAA CCGGCCCGC GCCGCCGGAGCTTTT TERM 3244 3971926 - 3971906 - R 76 -15.4 -2.51133 | overlap 3971905 CACGTAGCCATCAAT CGGGCCGG GCCAA CCGGCCCG CGCCGCCGGAGCTTT TERM 3245 3971934 - 3971976 + r 87 -5.7 -5.18726 | opp_overlap 3971961, overlap 3971926 3971932 3971934 3971935 3971935 CCGGCCCGCGCCGCC G-GAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGGAGCT-CTCAC TTTTTGTTCTGACGC RPD_3569 3974642 - 3972036 - | hypothetical protein TERM 3246 3973344 - 3973308 - G 71 -3.4 -4.58395 | opp_overlap 3973308 3973332 GTGATCTTCCAAAAA GCGGTCGAGCGGCGCC AGGAA GGCGTAGCCCAGCGGC TCCTTTTCGCCGGCC TERM 3247 3973515 - 3973488 - G 78 -14.8 -3.33361 | overlap 3973479 CAGGAACGACAGGAA GCCGGCGGCGGT GGAC ATCGCCGCCAGC GACAGCGGCACCGCG TERM 3248 3975224 - 3975210 - g 77 -12.8 -3.72027 | opp_overlap 3975201 AGCGTCGAGGAAGAA GCCGCG GCG CGCGGC CTTCCGGTGTTGAAC TERM 3249 3975749 - 3975731 - g 72 -11.7 -3.61398 | GCTCGTCGGCAAGAA GGCGGTG GGCAT CACCGCC GGCGCGTCCGCCCCG ispH 3974943 - 3975887 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RPD_3572 3977757 - 3977017 - | hypothetical protein RPD_3571 3975928 - 3977088 + | radical SAM family protein TERM 3250 3977098 - 3977071 - GT 72 -12.1 -3.27298 | gap 1, overlap 3977055 GGCGCCAAGCACGAA GCTTCGACAGCC GCGTA GGCTG-CGAAGC GCCCGATTGAAGTCG TERM 3251 3977733 - 3977706 - GT 85 -14.8 -3.56325 | overlap 3977707 CCGTCACAATCAGAA CCGGCCGCGGAT CAAA ACCCGCGGCCGC GTCGCCCCTAGCCCC TERM 3252 3977732 - 3977707 - GT 86 -18.3 -2.73474 | overlap 3977706 CGTCACAATCAGAAC CGGCCGCGGAT CAAA ACCCGCGGCCG CGTCGCCCCTAGCCC RPD_3573 3979718 - 3977754 - | squalene cyclase RPD_3574 3981014 - 3979758 - | amine oxidase RPD_3575 3981853 - 3981014 - | squalene/phytoene synthase RPD_3576 3982728 - 3981850 - | squalene/phytoene synthase TERM 3253 3982472 - 3982508 + g 70 -10.7 -3.53012 | overlap 3982473 GGCATCCCGCGCTCC GCCAGCGCGCGGCGG AGATTGA CCGCCTCGGGCTGGG TTTCGCCGCGGCCGA TERM 3254 3982826 - 3982779 - R 100 -33.6 -4.99056 | opp_overlap 3982792 GAAGACAAGGAAAAA CGTCGCGAACGGACCCGCCCGG CATC CCGGGCAGCTCCGTTCGCGACG CCATATAAGGGAAAT RPD_3577 3983223 - 3982981 - | hypothetical protein RPD_3578 3983641 - 3984138 + | hypothetical protein TERM 3255 3984232 - 3984207 - T 100 -20.5 -4.42238 | opp_overlap 3984207 CCAGCCGAATCAAAA CCCCTCGGACC CGGC GGTCCGAGGGG TTTCTGTTAGAGCGT TERM 3256 3984207 - 3984232 + T 100 -20.5 -4.19177 | opp_overlap 3984207 CCAGCCGAATCAAAA CCCCTCGGACC CGGC GGTCCGAGGGG TTTCTGTTAGAGCGT TERM 3257 3984345 - 3984300 - T 93 -8.6 -5.18726 | gap 3, opp_overlap 3984301, overlap 3984302 3984338 3984339 GCGTCAGAACAAAAA GTTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAGC GAGCGCTTGAGGCGC RPD_3579 3986731 - 3984365 - | RND superfamily transporter TERM 3258 3986338 - 3986300 - G 70 -11 -3.57462 | overlap 3986303 CAGTTCATTGGGAAA CAGC-GCCGCCGGCAGCC TGCCC GGCT-CCGGCGCCTGCCG CGCCGAGAACAGCGA RPD_3580 3988725 - 3987142 - | radical SAM family protein RPD_3581 3990747 - 3989044 - | methyl-accepting chemotaxis sensory transducer TERM 3259 3990193 - 3990222 + g 81 -12.1 -3.794 | ATCGATCGCGATCTT GGCGTTCGCGATC GCGC GATCGCGGCCGTC TTTGCTGGATTCGGC RPD_3582 3991267 - 3990812 - | Cache, type 2 RPD_3583 3992369 - 3991491 - | transglutaminase-like TERM 3260 3991953 - 3991918 - G 95 -19.1 -3.72695 | gap 2 ATCCGGCGCATCAAA TCCGCC-GCGC-CGGCG AGAA CGCCGCGCGCCGGCGGA AAGCTCTCGGCGGCG RPD_3584 3994867 - 3992366 - | hypothetical protein RPD_3585 3998278 - 3994892 - | transglutaminase-like TERM 3261 3996109 - 3996124 + g 70 -10.4 -3.71848 | opp_overlap 3996095 AGCGGTTGGCGCCGA GCCGCA CCTG TGCGGC TTCTTCATACAGGCC RPD_3586 3999270 - 3998440 - | HpcH/HpaI aldolase RPD_3587 4000464 - 3999364 - | malate/L-lactate dehydrogenase TERM 3262 4000552 - 4000580 + r 74 -9.6 -3.92592 | gap 2, overlap 4000554 ATCATTGTCCTCCCA TG-CGGCCG-GGCC AAT GGCCTCGGTCGTCA TTTAGTCTTGCGAGT RPD_3588 4001072 - 4000578 - | homoprotocatechuate degradation transcriptional regulator HpaR TERM 3263 4000765 - 4000752 - G 75 -9.5 -4.07885 | GATCGCCTCCGAAAA CGGCG CCAC CGCCG CGATCAGGGTCAGCC TERM 3264 4000910 - 4000900 - G 70 -8.2 -4.00042 | opp_overlap 4000903 GGCCCCAGCAAATAA GCGC TGT GCGC CAGCTCGGTGACTTC TERM 3265 4001505 - 4001552 + G 74 -5.4 -4.56597 | gap 1, overlap 4001507 AAGGCGATGCAGAGC CA-GTTGGCGATCGACGAGCCGG ATT CCGGCGTGCTGCTCGACGACATG TTTTTCGACGACGGC RPD_3589 4001289 - 4002095 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 3266 4002149 - 4002182 + G 77 -16.7 -2.78384 | opp_overlap 4002138 AATATTCCGCCAATC TCGACGACCGCGTCG ACAT CGCCGCCGTCGTCGA TCTGGTCCGCACCAC RPD_3590 4002115 - 4002513 + | 5-carboxymethyl-2-hydroxymuconate isomerase RPD_3591 4002506 - 4004062 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TERM 3267 4004151 - 4004113 - f 84 -16 -3.07816 | opp_overlap 4004137 4004138, overlap 4004137 GCGCCAGCGAGCGAA CCCGGAATCCAGACGTTC AGA GCACCTCGGGATTCCGGG TTCGCGCCTGACGGC RPD_3592 4004229 - 4005206 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD RPD_3593 4005364 - 4006239 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase RPD_3594 4006270 - 4007895 + | hypothetical protein RPD_3595 4008572 - 4007919 - | 2OG-Fe(II) oxygenase TERM 3268 4008654 - 4008626 - H 70 -10.2 -3.54459 | gap 1, overlap 4008627 TGAACTGGCCCGAAA CG-CGCGCGCCGG CAAG CCGCCGCGCGTCA TCCGAAGCCGCCACC RPD_3596 4008926 - 4009252 + | hypothetical protein RPD_3597 4009676 - 4009266 - | hypothetical protein RPD_3598 4009907 - 4010293 + | hypothetical protein RPD_3599 4010780 - 4010376 - | hypothetical protein RPD_3600 4011972 - 4011106 - | hypothetical protein TERM 3269 4011930 - 4011971 + g 74 -15.2 -3.06183 | gap 1, overlap 4011914 4011913 GGGCCAGCGCGACGA CGCGGTC-ACGCTCGCCGA TGATT TCGGCGAGCGTGGAGCGCA TTGCGTCGAGATAGC RPD_3601 4012688 - 4012014 - | cyclic nucleotide-binding TERM 3270 4012778 - 4012741 - H 71 -12.6 -3.07307 | gap 1, overlap 4012731 4012730 4012743 GAAATGCGCAGCGAA CACC-CGCGGCGTGGCG GTGAT CGCGCCGCCGCGTGGCG CCTGGAATACACGTT TERM 3271 4012870 - 4012831 - H 78 -14.9 -3.05463 | gap 1, overlap 4012818 4012817 ATCCGGCGCAGGGAA CGCCAC-CGGCCCCGCGG CGCGT CCGCGCGGCTGCGCGGCG ATTGACGGCGGGGGC TERM 3272 4013169 - 4013211 + G 82 -11.4 -4.08692 | gap 3 GCAGATCGAGAGCGA CGCCTCGGTGCGCGTGCTGGT CCTG ACCGGCAC-CG-GCCG-GGCG TTTTCGGCGGGCTTC RPD_3602 4013020 - 4013802 + | enoyl-CoA hydratase/isomerase RPD_3603 4014526 - 4013828 - | nitroreductase RPD_3604 4015937 - 4014693 - | acyl-CoA dehydrogenase-like TERM 3273 4015784 - 4015806 + g 70 -9.8 -3.63991 | overlap 4015785 TCTTCTGCCACGCCT TGCCGACCTC GAC GATGTCGGCG TTCTTCAGGCTGATG RPD_3605 4017365 - 4016118 - | acyl-CoA dehydrogenase-like TERM 3274 4017180 - 4017191 + g 77 -7.2 -4.51812 | GTGCGGCACCGCCCA GCCG GCCT CGGC TTTCTTCTTCTGCCA RPD_3606 4018503 - 4017376 - | acyl-CoA dehydrogenase-like TERM 3275 4018608 - 4018571 - R 95 -18.5 -3.53012 | opp_overlap 4018581 4018585 4018586, overlap 4018572 CGGGGCTCGCCGAAA GGCGAGAACCCGGAATC TCGA GATTCCGGGTTCGCGCT GCGCGCGCCCCGGAA TERM 3276 4018607 - 4018572 - R 100 -22 -2.71712 | opp_overlap 4018581 4018585 4018586, overlap 4018571 GGGGCTCGCCGAAAG GCGAGAACCCGGAATC TCGA GATTCCGGGTTCGCGC TGCGCGCGCCCCGGA RPD_3607 4020523 - 4018649 - | acyl-CoA synthetase TERM 3277 4020161 - 4020116 - G 86 -18.3 -3.10796 | gap 1 GCTCATCAGCGAATA GGCCGGCGACACCGGCGCGG TCGGAAT CCGCGCCTGCATCGCC-GCC ATCATCATCAGCGCG RPD_3608 4021388 - 4020582 - | enoyl-CoA hydratase/isomerase RPD_3609 4022338 - 4021580 - | short-chain dehydrogenase/reductase SDR TERM 3278 4022361 - 4022372 + r 72 -4.4 -4.63218 | TCCCTTTCCTTGGGC GCTT CCTG AAGC TTTTGTTGGAAGCGG RPD_3610 4023509 - 4022820 - | TetR family transcriptional regulator TERM 3279 4023443 - 4023472 + g 75 -12.9 -3.40403 | opp_overlap 4023438, overlap 4023445 4023446 CCGCGACCAACAGCT TGTCGGCGGTGGA ATTC TTCACCGCCGGTA TTCTGGTCGCCAGAG TERM 3280 4023445 - 4023470 + g 73 -13.3 -3.27475 | opp_overlap 4023438, overlap 4023443 4023446 GCGACCAACAGCTTG TCGGCGGTGGA ATTC TTCACCGCCGG TATTCTGGTCGCCAG TERM 3281 4023446 - 4023469 + g 71 -14.6 -2.56271 | opp_overlap 4023438, overlap 4023445 4023443 CGACCAACAGCTTGT CGGCGGTGGA ATTC TTCACCGCCG GTATTCTGGTCGCCA RPD_3611 4023640 - 4024815 + | acetyl-CoA acetyltransferase RPD_3612 4024975 - 4026519 + | acyl-CoA synthetase TERM 3282 4027407 - 4027380 - g 72 -6.9 -4.21936 | CCGACAATGTCAAAA TCGTGCTGCGG GTGGCG CTGCAGCCCGA CGGCCGGCTGGCGCA RPD_3613 4026680 - 4027594 + | hypothetical protein TERM 3283 4027767 - 4027742 - T 100 -15.5 -4.96848 | CCGCCGACATAAAAA GAAGCTCCGGC CGAG ACCGGAGCTTC AAGTCAAGGGAGAGA RPD_3614 4028530 - 4027823 - | putative outer membrane protein RPD_3615 4030319 - 4028661 - | hypothetical protein RPD_3616 4030711 - 4030424 - | twin-arginine translocation pathway signal TERM 3284 4030526 - 4030556 + g 70 -13.2 -3.01924 | overlap 4030529 4030536 GTTCGTGCACTTTCC GCAGGTCTGGCCGC TGC GCGGCGAGGCCTGA TATTGCGCGGCGGTC TERM 3285 4031230 - 4031278 + r 100 -27.5 -3.85698 | opp_overlap 4031231, overlap 4031231 AAAGCATCCGGATCA ACGCAGGCTCGATCGACCTGAGC ATC GCCCAGGTCGACCGAGCCTGCGC TTTGTCAGAACCGGA TERM 3286 4031277 - 4031231 - R 100 -35.4 -3.16039 | opp_overlap 4031230 4031231 AAGCATCCGGATCAA CGCAGGCTCGATCGACCTGAGC ATC GCCCAGGTCGACCGAGCCTGCG CTTTGTCAGAACCGG TERM 3287 4031231 - 4031277 + r 100 -31 -2.91276 | opp_overlap 4031231, overlap 4031230 AAGCATCCGGATCAA CGCAGGCTCGATCGACCTGAGC ATC GCCCAGGTCGACCGAGCCTGCG CTTTGTCAGAACCGG RPD_3617 4033315 - 4031300 - | autotransporter beta-domain-containing protein TERM 3288 4032134 - 4032090 - G 73 -12.2 -3.35813 | overlap 4032091 4032111 TCGGAGCTGAAGTAA CCGCCGACGCCGGCCAG-CCAA GCT TTGGTCTCGCCGACGCCGA-GG TCGCGACCGCTGGCG TERM 3289 4032871 - 4032897 + g 78 -15.9 -3.09987 | gap 1, opp_overlap 4032845, overlap 4032865 4032856 CGCCAGGAGTCGCGA CCGACGCGCTCG AAGG CG-GCGCGTCGG TTCCGTAGATGTTGA TERM 3290 4033756 - 4033740 - R 75 -13.7 -3.03243 | overlap 4033753 ACTCAGCGCGTAACA CGCGTGG CAA CCACGCG ACGCGCACTGCGGAC RPD_3618 4035756 - 4033900 - | acyl-CoA dehydrogenase-like TERM 3291 4034944 - 4034914 - G 76 -14.7 -3.14132 | overlap 4034929 GCCGTCGTCGAGGAA GCGCGGCATCAGA AACAG CCCGACGCCGCGC GTCCCCCGCCCCGCG RPD_3619 4035844 - 4036332 + | CinA-like RPD_3620 4036713 - 4036339 - | crcB protein TERM 3292 4036797 - 4036817 + r 93 -16.1 -3.75629 | opp_overlap 4036797 GCGGGGCACGAAAAA GGCGGCCGT TGC GCGGCCGCC TTTCGATTACCCATC TERM 3293 4036817 - 4036797 - R 100 -15.4 -4.72272 | opp_overlap 4036797 GCGGGGCACGAAAAA GGCGGCCG TTGCG CGGCCGCC TTTCGATTACCCATC RPD_3621 4037472 - 4036876 - | superoxide dismutase RPD_3622 4038884 - 4037649 - | major facilitator transporter RPD_3623 4039143 - 4040516 + | MATE efflux family protein TERM 3294 4040575 - 4040621 + F 71 -10.9 -3.51934 | opp_overlap 4040600 4040603, overlap 4040574 GAATCCCCTGCTCTG TTATTCAGCGCGCTGCGAC GCACAATCA GTCGCGCCGCGCCGAATGA TCTTTCTGGAGGACG RPD_3624 4040638 - 4041081 + | hypothetical protein TERM 3295 4041184 - 4041143 - T 91 -3.2 -5.5208 | gap 3, opp_overlap 4041144, overlap 4041144 4041147 4041173 4041180 TCAGAACAGAAAAAA GTTAGAG-CTCCGGTTCTGAT TCT ATCAGAACCGGAAACGCT--C TAGGCAGACGGCCCG RPD_3625 4042358 - 4041207 - | hypothetical protein RPD_3626 4042579 - 4042436 - | hypothetical protein TERM 3296 4042894 - 4042872 - g 71 -3.4 -4.62203 | gap 1 CGCAAAGAACGAAAA CATCGCGCG CAGTTT CGC-CGACG CCGGGCGAAAGGCCG RPD_3627 4042795 - 4044018 + | metallophosphoesterase TERM 3297 4045045 - 4045059 + G 71 -12.8 -3.27298 | opp_overlap 4045037 GTCAAGACCGCGCCA GCGCCG AGG CGGCGC TTGATGATTGCGCGC RPD_3628 4044015 - 4047470 + | hypothetical protein TERM 3298 4047626 - 4047636 + F 82 -3.2 -5.1615 | CGAAAAACCAAACTA TCGA GAG TCGG TTTTTTCCGTCTTCC TERM 3299 4048025 - 4048010 - f 71 -5.4 -4.39426 | CAGATCGGGAGAAAA TCGCAA ACTA TCGCGA GCGAAGCAGGGCCGG RPD_3629 4048610 - 4049380 + | hypothetical protein RPD_3630 4049364 - 4052885 + | DEAD/DEAH box helicase-like RPD_3631 4054481 - 4052958 - | hypothetical protein TERM 3300 4053039 - 4053017 - G 72 -8.4 -4.07568 | overlap 4053018 GCCCGGCCGTCAAAA TTTCACCGAC GAG GTCGGCGAAC CTCAACGTCACCGGC RPD_3632 4055923 - 4054478 - | hypothetical protein TERM 3301 4056008 - 4056041 + H 74 -4.6 -4.56597 | opp_overlap 4055998, overlap 4056033 AGGAACAGCGGACCA CGC-AGGCGACCGCCT GCAT AGGTAGT-GCCTAGCG TTTTTCCACCGCAGG TERM 3302 4056650 - 4056615 - g 80 -15.4 -3.28924 | gap 1, opp_overlap 4056606 4056633 GACGGTTGTCGACAA CGGACCGGCAGCCGCGA GGA TGGCGGCTGCTGG-CCG AACTTCGAGATGCCT RPD_3633 4056261 - 4056668 + | hypothetical protein RPD_3634 4056712 - 4057161 + | hypothetical protein RPD_3635 4057164 - 4057889 + | hypothetical protein RPD_3636 4058037 - 4059227 + | DNA polymerase IV RPD_3637 4061440 - 4059446 - | iron permease FTR1 TERM 3303 4060324 - 4060356 + g 88 -16.3 -3.65351 | CGGCGGGATCGCTCC GTGCGATGGCGGACC GCA GATCCCCCATCGCAC TTTCGATCCGGATCA RPD_3638 4062580 - 4061600 - | bile acid:sodium symporter TERM 3304 4062783 - 4062817 + G 88 -10 -4.3586 | opp_overlap 4062787 4062788, overlap 4062787 4062789 GCAGGTTCTCTCGCT GAAACGCTCGATGGTG CGT CACCATCGCGAATTTC TTTTCATCTCAATCA TERM 3305 4062787 - 4062813 + G 79 -5 -4.75288 | opp_overlap 4062787 4062788, overlap 4062783 4062789 GTTCTCTCGCTGAAA CGCTCGATGGTG CGT CACCATCGCGAA TTTCTTTTCATCTCA RPD_3639 4062666 - 4063058 + | regulatory protein, ArsR RPD_3640 4063413 - 4063165 - | putative silver efflux pump-like RPD_3641 4063724 - 4063410 - | putative silver efflux pump-like TERM 3306 4063572 - 4063547 - GR 77 -14.7 -2.8751 | overlap 4063536 4063544 ACATCAGCATAACCA CGCCGGTCTCG GCGG CGACACCGGCG AGCGCGATGAACCCG RPD_3642 4064598 - 4063699 - | cation diffusion facilitator family transporter RPD_3643 4066817 - 4064637 - | heavy metal translocating P-type ATPase TERM 3307 4066450 - 4066434 - G 85 -7.9 -4.72272 | CTTCCCGATCAAAAA CGCCGCT CCT AGCGCCG TTCCGGAAGCGATTG RPD_3644 4068093 - 4066954 - | hypothetical protein TERM 3308 4068090 - 4068125 + g 83 -14.6 -3.6471 | overlap 4068094 CGTCGTTCATGATGT CCATTCGGAGCGCCGC AGAT GCGGCGCTCCCATCGG TTGTGTGGTTTCCGG TERM 3309 4068094 - 4068121 + r 83 -17 -2.65166 | overlap 4068090 GTTCATGATGTCCAT TCGGAGCGCCGC AGAT GCGGCGCTCCCA TCGGTTGTGTGGTTT RPD_3645 4068510 - 4068142 - | hypothetical protein RPD_3646 4071723 - 4068553 - | heavy metal efflux pump CzcA RPD_3647 4072782 - 4071826 - | secretion protein HlyD RPD_3648 4074053 - 4072779 - | outer membrane efflux protein RPD_3649 4074507 - 4074112 - | hypothetical protein TERM 3310 4074208 - 4074153 - G 72 -8.8 -4.11216 | gap 1 TGTCGAGCCGGAAAA GGCCGGCGATCATCACCGAAGCCGCCG CCA CGACGGGCGCGGC-AGGATCGGCGGTC GGGACGAAGGCGACC RPD_3650 4075597 - 4074626 - | hypothetical protein TERM 3311 4075808 - 4075790 - R 100 -16 -4.43012 | opp_overlap 4075785 4075782 ATGGCAATACGAAAA CAGGCGCC AAA GGCGCCTG TGAACTCAGTTTTTC TERM 3312 4076463 - 4076439 - R 71 -5.6 -4.25104 | CCTTTTCGAGTAAAA GGTCTCGCAC CAGAT GAGCGAGAAC GGAAATGACAATCGC RPD_3651 4076944 - 4076753 - | hypothetical protein RPD_3652 4077202 - 4077807 + | hypothetical protein TERM 3313 4078223 - 4078211 - g 71 -9.1 -3.79419 | overlap 4078209 CCCGGGGAGAAAAGA TCCCG GTG CGGGA AGGGTTCGACAACAT RPD_3653 4077817 - 4078356 + | hypothetical protein TERM 3314 4079067 - 4079029 - g 71 -13.9 -2.87132 | gap 1, opp_overlap 4079029 CGGTTTCGGGACACA CGCACGTCTCGCTCGACG AAAT CGTCG-GCAAGACGCGCC TGATCTCGAACAGCA RPD_3654 4078362 - 4079159 + | metallophosphoesterase TERM 3315 4079440 - 4079461 + G 84 -13.7 -3.92075 | ATGTCGCGGTCGTGA CGGTCGTCC GTCC GGACGGCCG TTTCTACCTGGACAT RPD_3655 4079247 - 4079837 + | hypothetical protein TERM 3316 4079891 - 4079881 - g 70 -2.4 -4.57569 | CGATCGTCCGAAAAA TCGG ATG CCGG CGCAATGGGCCGCCA RPD_3656 4079834 - 4081918 + | AAA ATPase, central region RPD_3657 4081934 - 4082200 + | hypothetical protein TERM 3317 4082584 - 4082614 + G 84 -13.3 -3.9243 | opp_overlap 4082587, overlap 4082587 GCATCGACTGGATAT GAAGGTGACGGGC GCAAA GCCCGTCATCTCC TTCTTTCCGGACTTC TERM 3318 4082587 - 4082611 + G 70 -13.6 -3.02371 | opp_overlap 4082587, overlap 4082584 TCGACTGGATATGAA GGTGACGGGC GCAAA GCCCGTCATC TCCTTCTTTCCGGAC RPD_3658 4082312 - 4083148 + | hypothetical protein TERM 3319 4083683 - 4083643 - g 73 -14 -3.08471 | overlap 4083655 4083668 GAGAACTGGACGGAA GCGCGGGACAAAGGATTC AAATG GATTCCCTCGTCCGGCGC CCTGCTGCGTGCCGT RPD_3659 4083145 - 4085502 + | integrase catalytic subunit RPD_3660 4085511 - 4086500 + | hypothetical protein RPD_3661 4086497 - 4088977 + | hypothetical protein RPD_3662 4089703 - 4088978 - | hypothetical protein RPD_3663 4090125 - 4089859 - | hypothetical protein RPD_3664 4090348 - 4091076 + | hypothetical protein RPD_3665 4092757 - 4091510 - | major facilitator transporter TERM 3320 4092877 - 4092859 - H 70 -7.4 -4.05446 | TTTCCTAACCATAAA CTGGGCAA ATT TTGCCGAG TGATCGGAAGTGTCG TERM 3321 4094078 - 4094034 - g 80 -9.7 -4.20696 | overlap 4094035 4094048 CGAGCAAGCGCAAAA CGGCGGGCAAGGCAGCCGCGG ATT CCGCAGCGGCGCTGCAGCCCG AAGCAGTTGCGGCCG flhA 4092920 - 4095154 + | flagellar biosynthesis protein FlhA RPD_3667 4095480 - 4095680 + | hypothetical protein TERM 3322 4095782 - 4095810 + T 100 -12.5 -4.74103 | opp_overlap 4095780 4095786 4095787, overlap 4095787 CAAGTGGATCAAACG GAAAGCGCCCG CTCCCCA CGGGCGTTTTC TTTTTGCGTTGACGC TERM 3323 4095787 - 4095805 + T 100 -8.8 -5.29885 | opp_overlap 4095780 4095787 4095786, overlap 4095782 GGATCAAACGGAAAG CGCCCG CTCCCCA CGGGCG TTTTCTTTTTGCGTT RPD_3668 4096824 - 4095925 - | hypothetical protein RPD_3669 4097372 - 4096824 - | sigma-70 region 2 TERM 3324 4097528 - 4097511 - R 100 -14.1 -5.36441 | CCGGCACACAAAAAA CCCGGGC GGCG GCCCGGG CTTCGAACTTTCCAG RPD_3670 4097976 - 4097557 - | flagellar export FliJ fliI 4099410 - 4098085 - | flagellum-specific ATP synthase RPD_3672 4099780 - 4100481 + | winged helix family two component transcriptional regulator TERM 3325 4100535 - 4100554 + T 100 -12.8 -5.42975 | CACCTCCCGACTGGA CCCCGCCG CAAA TGGCGGGG TTTTTGTTTGTCTGG TERM 3326 4100761 - 4100731 - T 75 -13.4 -3.10727 | opp_overlap 4100729 4100731, overlap 4100727 4100725 GAATAGAGAGATAGA GCTCCGGTTCTGAT TCC ATCAGAACCGGAAA AGCTCTAGTGCGATG TERM 3327 4100863 - 4100845 - T 72 -11.6 -3.34609 | overlap 4100843 4100839 TGACGGAAACGAAGA GGGGCCGC TCG GCGGCCTC AGCCGGTGCGGGCGG RPD_3674 4101740 - 4100862 - | protein-glutamate O-methyltransferase TERM 3328 4101559 - 4101580 + g 89 -10.1 -4.46656 | gap 1, opp_overlap 4101554 GCCTCGACAACGTCG GCGGTGACCG CCT CGG-CGCCGC TTTTCATCTTCTGCA RPD_3675 4102894 - 4101737 - | chemotaxis-specific methylesterase TERM 3329 4101828 - 4101799 - G 75 -9.4 -4.11692 | gap 2 GATTGAGCGGCAAAA CCGCGGCGCAGATG CCGG CAT-T-CGCCGCGG CGCCGGGCATTCCCC TERM 3330 4102676 - 4102702 + g 70 -10.2 -3.74693 | GTCGAGTTCGGGCAT CTCGATGTCG AGCACTG CGACATCGGG TTTGATGCGCTCGAC RPD_3676 4103332 - 4102967 - | response regulator receiver TERM 3331 4103038 - 4103078 + g 70 -6 -4.21194 | gap 1, overlap 4103039 4103075 TCATGATGTATTCGT TGGCGCCGGCGTGCAGCGC CCGC GCGATGTGCG-CGACGTCG TTTTCAGTGGTGCAG TERM 3332 4103075 - 4103101 + g 85 -10.2 -4.21194 | overlap 4103039 4103038 CGCGATGTGCGCGAC GTCGTTTTCAGT GGT GCAGAAAACGAC TTTTGGCTGATCGCC RPD_3677 4103858 - 4103388 - | CheW-like protein RPD_3678 4106659 - 4103882 - | ATP-binding region, ATPase-like RPD_3679 4107499 - 4106846 - | hypothetical protein TERM 3333 4107170 - 4107183 + g 72 -4.5 -4.4891 | CAAACGAGGCAGATT CCAGG CGAT CTTGG TTTTCTCGTCCTCGA RPD_3680 4107631 - 4108467 + | inositol monophosphatase RPD_3681 4108975 - 4108469 - | hypothetical protein RPD_3682 4109088 - 4109684 + | hypothetical protein TERM 3334 4110672 - 4110658 - g 70 -11.4 -3.35813 | GCGCAGGTCAAGGAA GCCGAG ACG CTCGGC AGCCGCGTCGCCGCG RPD_3683 4109944 - 4111239 + | hypothetical protein RPD_3684 4113310 - 4111844 - | hypothetical protein RPD_3686 4113940 - 4114296 + | hypothetical protein RPD_3687 4114843 - 4114409 - | hypothetical protein RPD_3688 4116496 - 4114949 - | hypothetical protein RPD_3689 4116676 - 4117257 + | ErfK/YbiS/YcfS/YnhG TERM 3335 4117295 - 4117254 - f 76 -5.7 -4.56597 | gap 1, opp_overlap 4117262 4117263, overlap 4117263 GGTGGTGGTCAAAAA CTAACACAATCGCGTGCGCC GGT GGCGCGCGCGACCCTGGC-G CGTCGAATTTCGAGT TERM 3336 4117287 - 4117263 - f 100 -17.1 -3.85785 | opp_overlap 4117262 4117263, overlap 4117254 CAAAAACTAACACAA TCGCGTGCGCC GGT GGCGCGCGCGA CCCTGGCGCGTCGAA RPD_3690 4117345 - 4118160 + | hypothetical protein TERM 3337 4118193 - 4118230 + T 72 -14 -2.72344 | opp_overlap 4118192 CCAACGTGATCGAAG GCGCCGCCTTGCGCGC GCCGCG GCGCGGATGGCGCCGC TACTTGCAGATCGCC RPD_3691 4119309 - 4118230 - | peptidase M48, Ste24p TERM 3338 4118783 - 4118748 - G 93 -19.7 -2.62184 | opp_overlap 4118737 TCTCGCTCGACAGCA CCGCCGGCTGCACCG TTTCGC CGATGCTGCCGGCGG CGCGCAGCTTCTCGA TERM 3339 4118903 - 4118857 - G 74 -12.4 -3.61398 | gap 3 CTTGTCGCCGAACAA CGTCCTGATCTGCCG-GTCGGCG ACGT CGCCGACGCGGC-GCTC-GAACG CCTGCGGCAACAGCG RPD_3692 4120488 - 4119331 - | hypothetical protein TERM 3340 4120528 - 4120556 + r 77 -13.1 -3.54721 | ACGGAGGTCGTTGTT CCGATTGGTCGTC CGC GACGACCGGCCGG TTCTATCGCGTTTTC RPD_3693 4121960 - 4120788 - | isovaleryl-CoA dehydrogenase TERM 3341 4121402 - 4121388 - G 70 -8.5 -3.96148 | CTTCTCGACCAGAAA CGCGG TCATT CCGCG CGGCCCGGCGTTGGG RPD_3694 4122320 - 4123585 + | cytochrome P450 RPD_3695 4123617 - 4124792 + | acyl-CoA dehydrogenase-like TERM 3342 4124873 - 4124830 - f 78 -12.4 -3.80573 | gap 1, opp_overlap 4124828, overlap 4124831 GCCATCACCATCAAA CCGTCATTCCG-GGTCGCCGC GCA GCGGCGAACTCGGAATCCCGA ACTGTTGACCCGACG TERM 3343 4124872 - 4124831 - f 74 -13.7 -2.88023 | gap 1, opp_overlap 4124828, overlap 4124830 CCATCACCATCAAAC CGTCATTCCG-GGTCGCCGC GCA GCGGCGAACTCGGAATCCCG AACTGTTGACCCGAC RPD_3696 4124964 - 4126058 + | L-carnitine dehydratase/bile acid-inducible protein F RPD_3697 4126073 - 4126948 + | hypothetical protein RPD_3698 4126942 - 4127325 + | hypothetical protein TERM 3344 4127399 - 4127383 - g 84 -9.3 -4.44667 | overlap 4127384 CCCGCCAAGAACAAA GCCGCGC CGC GCGCGGT CAGCGTGAAGGAGGC TERM 3345 4127398 - 4127384 - g 71 -12.8 -3.26318 | overlap 4127383 CCGCCAAGAACAAAG CCGCGC CGC GCGCGG TCAGCGTGAAGGAGG TERM 3346 4128557 - 4128535 - g 73 -4 -4.65895 | overlap 4128537 CTGGCCATGCAAAAA TACTTGCCGA TGC CCGGCCAGGA CAGCTTTGCGACGAT RPD_3699 4127365 - 4128987 + | benzoylformate decarboxylase RPD_3700 4129977 - 4129174 - | short-chain dehydrogenase/reductase SDR TERM 3347 4129549 - 4129516 - G 77 -15.9 -3.01712 | CTTGGTCGCCGAATA GGCCGGGCTGCCGAC CTGC GACAGCAGCCCCGCC GCCGAAATCGTGTTG RPD_3701 4130796 - 4130098 - | Hly-III related proteins TERM 3348 4131784 - 4131825 + G 80 -13.7 -3.62597 | gap 1 CTGTGGGCGATGATG CGGCGGCGCTACGA-GGCCT ACA AGGACGTCGTGGTGCGGCCG TTCTTCCGCGATCAC RPD_3702 4131022 - 4132491 + | protein of unknown function DUF463, YcjX-like protein RPD_3703 4132488 - 4133582 + | hypothetical protein RPD_3704 4133783 - 4135561 + | ferredoxin RPD_3705 4135730 - 4135972 + | hypothetical protein TERM 3349 4135998 - 4136033 + T 100 -21.2 -3.73402 | overlap 4135999 4136004 TACAGTTAGCAGGTG TGGAGGTCCCGGCCGC CGGC GCGGCCGGGATTTCCG TTTGATCCGAGCTGT TERM 3350 4135999 - 4136032 + T 100 -22.5 -2.8372 | overlap 4135998 4136004 ACAGTTAGCAGGTGT GGAGGTCCCGGCCGC CGGC GCGGCCGGGATTTCC GTTTGATCCGAGCTG TERM 3351 4136004 - 4136027 + T 100 -19.6 -3.87149 | overlap 4135999 4135998 TAGCAGGTGTGGAGG TCCCGGCCGC CGGC GCGGCCGGGA TTTCCGTTTGATCCG RPD_3706 4136701 - 4136051 - | hypothetical protein TERM 3352 4137548 - 4137526 - g 73 -11.2 -3.73775 | opp_overlap 4137536 4137537 GCGATCGGCAGCAAA GCCGGCAACG CGC CGCTGCCGTC ACGGCCGGGCATTTC RPD_3707 4136854 - 4139862 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase RPD_3708 4139967 - 4141232 + | L-carnitine dehydratase/bile acid-inducible protein F RPD_3709 4142780 - 4141278 - | hypothetical protein TERM 3353 4142880 - 4142842 - R 100 -21.1 -3.84451 | opp_overlap 4142847, overlap 4142843 4142847 GCCGGGAAATCTAAA GCAAAGGGCGCGACCTG TCTCG CAGGCCGCGCCCTTTGT GACTGCGTGTCGGAT TERM 3354 4142879 - 4142843 - R 100 -24.6 -2.90349 | opp_overlap 4142847, overlap 4142842 4142847 CCGGGAAATCTAAAG CAAAGGGCGCGACCTG TCTCG CAGGCCGCGCCCTTTG TGACTGCGTGTCGGA TERM 3355 4142847 - 4142875 + r 100 -18.1 -3.93136 | opp_overlap 4142843 4142842 4142847 GAAATCTAAAGCAAA GGGCGCGACCTGT CTC GCAGGCCGCGCCC TTTGTGACTGCGTGT TERM 3356 4142875 - 4142847 - R 100 -19.6 -4.12279 | opp_overlap 4142847, overlap 4142843 4142842 GAAATCTAAAGCAAA GGGCGCGACCTG TCTCG CAGGCCGCGCCC TTTGTGACTGCGTGT RPD_3710 4143866 - 4142895 - | hypothetical protein TERM 3357 4143071 - 4143096 + g 95 -11.2 -4.45544 | gap 1, opp_overlap 4143067, overlap 4143075 GCACCACCCAACCTT CGACCGTCGGC AGCCG GCCGACG-TCG TTTTGCTTCGTCGCA TERM 3358 4143497 - 4143453 - G 74 -12.8 -3.55444 | GCCGTATTGCGCAAA GCCGGCGCTCGTCAGCGC-GCC ACC GGCAGCACCGGCGATCGC-GGC CAGGATCACCGCGAC RPD_3711 4144067 - 4144678 + | glutathione S-transferase-like RPD_3712 4145297 - 4144800 - | hypothetical protein RPD_3713 4146216 - 4145311 - | hypothetical protein RPD_3714 4146855 - 4146241 - | hypothetical protein RPD_3715 4149261 - 4146931 - | carbon-monoxide dehydrogenase RPD_3716 4150325 - 4149450 - | dihydrodipicolinate synthetase RPD_3717 4150436 - 4152577 + | oligopeptidase B TERM 3359 4152614 - 4152649 + F 74 -14.9 -2.55544 | opp_overlap 4152613 4152619 4152622, overlap 4152608 4152619 4152622 TCATTGCGAGCGAAG CGAAACAATCCAGCG CGCCAA CTCTGGATTGTTTCG TCGCTTGGCTCCTCG TERM 3360 4153165 - 4153141 - g 73 -14.3 -3.16055 | overlap 4153130 4153152 CAAAGCCGCGATCAA GCCGAACACCA GAC TGGTGATCGGC GAGACGATCGGCAAT TERM 3361 4153470 - 4153480 + G 70 -8.2 -3.96148 | overlap 4153471 4153473 TCGACGAACAGTTCG GGCC GCC GGCC TTTATCATCCGCGCG RPD_3718 4152701 - 4153996 + | O-acetylhomoserine aminocarboxypropyltransferase RPD_3719 4154000 - 4154782 + | alpha/beta hydrolase fold TERM 3362 4154849 - 4154795 - T 75 -14.3 -2.7083 | gap 1, opp_overlap 4154797, overlap 4154792 TAGCTGATAAATTTA GAGTTCGTCATTCCGGGA-CGCTCGC ACGA GCGAGCGACCCCGGAATCCCGAGCTG TTGAGCACCCGGCGT TERM 3363 4154797 - 4154847 + T 88 -16.9 -3.01712 | gap 1, opp_overlap 4154795 4154792 GCTGATAAATTTAGA GTTCGTCATTCCG-GGACGCTCGC ACGA GCGAGCGACCCCGGAATCCCGAGC TGTTGAGCACCCGGC RPD_3720 4155862 - 4154939 - | AAA ATPase, central region RPD_3721 4156290 - 4155865 - | ribulose-bisphosphate carboxylase rbcL 4157760 - 4156303 - | ribulose bisophosphate carboxylase TERM 3364 4158639 - 4158663 + G 72 -8.6 -4.03234 | gap 1, opp_overlap 4158621 GACCATCAAGCAGGC GGTGATCGCCG GTCT CGGC-ATCGCC TTTCTATCCGCGCAC RPD_3723 4157932 - 4158900 + | LysR family transcriptional regulator TERM 3365 4158980 - 4158948 - T 100 -12 -4.48741 | gap 1, opp_overlap 4158949 4158953, overlap 4158953 CAATGCATCAGAAAA GCA-AAGCGCGCGCC TTGC GGCGCGCGCTCGTGT TCTGACTCGACTTCG TERM 3366 4158949 - 4158979 + T 74 -13.3 -3.36803 | gap 1, opp_overlap 4158948 4158953, overlap 4158953 AATGCATCAGAAAAG CA-AAGCGCGCGCC TTGC GGCGCGCGCTCGTG TTCTGACTCGACTTC TERM 3367 4158953 - 4158974 + T 87 -18.7 -2.81045 | opp_overlap 4158948 4158953, overlap 4158949 CATCAGAAAAGCAAA GCGCGCGCC TTGC GGCGCGCGC TCGTGTTCTGACTCG TERM 3368 4158974 - 4158953 - T 100 -18.7 -4.28487 | opp_overlap 4158953 4158949, overlap 4158948 CATCAGAAAAGCAAA GCGCGCGCC TTGC GGCGCGCGC TCGTGTTCTGACTCG RPD_3724 4160216 - 4159005 - | 5-aminolevulinate synthase RPD_3725 4161298 - 4160213 - | hypothetical protein TERM 3369 4160339 - 4160369 + g 73 -12.6 -3.45152 | overlap 4160338 TTCGAGACGTTGCCG GGCGCAGCTCGA TCGTGCC TTGGGCTGCGCC TCTTCCTTTTCCTTG RPD_3726 4162415 - 4161312 - | magnesium-protoporphyrin IX monomethyl ester cyclase RPD_3727 4162717 - 4162412 - | hypothetical protein TERM 3370 4162518 - 4162558 + g 82 -17 -3.05596 | gap 1 CCGGCTCGGATCACG GTCGCGGTGCGGCGAACGA CCAG TCGTTCGCCGAACT-CGAC TTGGGTCGGCGCGTC RPD_3728 4163205 - 4162714 - | putative photosynthetic complex assembly protein RPD_3729 4163881 - 4163219 - | putative photosynthetic complex assembly protein RPD_3730 4164642 - 4163878 - | photosynthetic reaction center subunit H TERM 3371 4164691 - 4164677 - R 70 -10 -3.60792 | opp_overlap 4164676 TTGTTAACCTGGAAA TTCGGC TAG GCCGAA CTTGGATGAAGGCTG RPD_3731 4166098 - 4164665 - | PUCC protein RPD_3732 4166796 - 4166095 - | Mg-protoporphyrin IX methyl transferase TERM 3372 4166162 - 4166135 - G 83 -13.4 -3.87815 | gap 1, opp_overlap 4166161, overlap 4166145 TGCGAGGTGTAGAAA CCGGACGACACCC GAT GGGTG-CGGCCGG GCTGCCATTGCTGCA chlL 4167734 - 4166796 - | protochlorophyllide reductase iron-sulfur ATP-binding protein bchH 4171477 - 4167731 - | magnesium chelatase subunit H TERM 3373 4170608 - 4170590 - GR 79 -4.4 -4.72272 | overlap 4170592 GCTCTTCATGAAAAA GCGCTCGA TCG CCGGACGC TGATCGAGACCCGCG RPD_3735 4173059 - 4171452 - | light-independent protochlorophyllide reductase subunit B RPD_3736 4174348 - 4173062 - | light-independent protochlorophyllide reductase subunit N RPD_3737 4175034 - 4174345 - | 2-vinyl bacteriochlorophyllide hydratase RPD_3738 4175168 - 4176055 + | cobalamin B12-binding TERM 3374 4176280 - 4176233 - g 70 -8.5 -3.96298 | gap 3 GATTCATCAACGAAA TGCTGCA-CGGGAGGGCA-AGCCG CCA CGGCTACGCCCTGCTGCTGC-GCA ATCTGCATCCGCCCT RPD_3739 4176124 - 4176807 + | Heme oxygenase (decyclizing) TERM 3375 4176908 - 4176858 - T 72 -12 -3.30338 | opp_overlap 4176858 4176867, overlap 4176862 AGAACTCGCTCACAA GAAACTAAAGCAGGATGACGATTC GAA GATGCATCAGCCTGCTTTAACTTC TTACTTTCTGGTCTT TERM 3376 4176904 - 4176862 - T 83 -9.2 -4.30719 | opp_overlap 4176858 4176867, overlap 4176858 CTCGCTCACAAGAAA CTAAAGCAGGATGACGATTC GAA GATGCATCAGCCTGCTTTAA CTTCTTACTTTCTGG RPD_3740 4179107 - 4176909 - | phytochrome TERM 3377 4177225 - 4177191 - G 70 -11.3 -3.53343 | gap 1, opp_overlap 4177193 4177194 AACGCCTTCCTGAAA CCGGCCG-CGCGCCGC GTCA GCGGCCCGGCGATCGG CGTTGTCGGTGAAGA TERM 3378 4177740 - 4177755 + g 75 -4.6 -4.62069 | opp_overlap 4177726 ATCGGCGGGGGTATT GCCGAT CACG AACGGC TTTTTCGGATCGCCG RPD_3741 4180431 - 4179109 - | transcriptional regulator PpsR RPD_3742 4180792 - 4181211 + | cytochrome c, class I TERM 3379 4181247 - 4181288 + T 100 -25.5 -4.07568 | opp_overlap 4181253, overlap 4181253 CTGATTGATGCCGAC GCGAAAGCTCTGGTTCTGA TCCA TCAGAACCAGAGCTTTTGC TTTTCAGCCCCAGCG TERM 3380 4181282 - 4181253 - T 100 -19.5 -3.60296 | opp_overlap 4181247 4181253 GATGCCGACGCGAAA GCTCTGGTTCTGA TCCA TCAGAACCAGAGC TTTTGCTTTTCAGCC TERM 3381 4181253 - 4181282 + T 100 -19.5 -4.67038 | opp_overlap 4181253, overlap 4181247 GATGCCGACGCGAAA GCTCTGGTTCTGA TCCA TCAGAACCAGAGC TTTTGCTTTTCAGCC RPD_3743 4181612 - 4181337 - | hypothetical protein TERM 3382 4181448 - 4181415 - G 72 -14.5 -2.70932 | gap 1, overlap 4181399 4181397 GGTCGGCGTGAACCA GCCGGCGCCGGCGAGC ACG GCGCGC-AGCGCCAGC AGCATTAGGGCGCCC RPD_3744 4182121 - 4181654 - | TspO/MBR family protein RPD_3745 4183340 - 4182138 - | geranylgeranyl reductase TERM 3383 4182513 - 4182494 - G 71 -12.8 -3.29043 | overlap 4182495 AAGCCGGCGCCACAA CGCCGGCG GCGT CGCCGGCA AGCAGCACGCTGTGG RPD_3746 4184685 - 4183342 - | PUCC protein TERM 3384 4183593 - 4183608 + g 74 -5.4 -4.56597 | overlap 4183594 CGCCCCACAGCCCCA TGCGAA CCCC TTCGCG TTTTTCACCGCCGGC RPD_3747 4185581 - 4184688 - | bacteriochlorophyll/chlorophyll a synthase RPD_3748 4187007 - 4185574 - | transcriptional regulator PpsR TERM 3385 4187068 - 4187079 + r 74 -2.2 -4.84017 | CTGCGTCCTACAAGT CGAG TCTT CTTG TTTTTCTCGCGCCTT TERM 3386 4187300 - 4187259 - R 74 -12.9 -3.27525 | opp_overlap 4187255 4187260 4187261, overlap 4187254 4187261 TCGGTCTAAATGTAA CAGCGCGCGCCTGACCGGT ATTC ATCAATCAGGCGCGCGCAT TGTCTTTGTCGGGTT TERM 3387 4187260 - 4187299 + r 89 -14.2 -3.90097 | opp_overlap 4187259 4187254 4187261, overlap 4187255 4187261 CGGTCTAAATGTAAC AGCGCGCGCCTGACCGGT ATTC ATCAATCAGGCGCGCGCA TTGTCTTTGTCGGGT TERM 3388 4187261 - 4187298 + r 90 -17.7 -2.93335 | opp_overlap 4187259 4187254 4187261, overlap 4187260 4187255 GGTCTAAATGTAACA GCGCGCGCCTGACCGGT ATTC ATCAATCAGGCGCGCGC ATTGTCTTTGTCGGG TERM 3389 4187298 - 4187261 - R 95 -19.9 -3.20349 | opp_overlap 4187261 4187260 4187255, overlap 4187259 4187254 GGTCTAAATGTAACA GCGCGCGCCTGACCGGT ATTC ATCAATCAGGCGCGCGC ATTGTCTTTGTCGGG RPD_3749 4188254 - 4187331 - | photosynthetic reaction center subunit M RPD_3750 4189115 - 4188282 - | photosynthetic reaction center subunit L TERM 3390 4189040 - 4189029 - G 70 -3.6 -4.55118 | overlap 4189017 GAACCCGACATAAAA CGGG CCAA CCCA AAAATCGAACAGGTC RPD_3751 4189427 - 4189248 - | antenna complex, alpha/beta subunit RPD_3752 4189652 - 4189440 - | antenna complex, alpha/beta subunit RPD_3753 4190020 - 4189796 - | hypothetical protein TERM 3391 4189943 - 4189925 - G 70 -8.8 -3.96327 | AGCTCGGATCAGAAA CAGCGCGT AGC ACGCACCG AACATCAGCCGGCAT RPD_3754 4191548 - 4190097 - | chlorophyllide reductase subunit Z RPD_3755 4193170 - 4191548 - | chlorophyllide reductase subunit Y RPD_3756 4194194 - 4193196 - | chlorophyllide reductase iron protein subunit X TERM 3392 4193891 - 4193904 + g 79 -2.3 -5.06414 | overlap 4193892 CGCCGATCTTCACTT CCTCG CCGG CGAGC TTTTTCTTCGACGAG RPD_3757 4195132 - 4194194 - | chlorophyll synthesis pathway protein BchC RPD_3758 4196343 - 4195201 - | O-methyltransferase family protein TERM 3393 4195743 - 4195699 - G 79 -3.5 -4.8667 | gap 3, overlap 4195703 GACAGCCGACAAAAA CGATC-CGTCGCCGCC-GC-CG ACGT CGAGCAGGCAGCGATGCGCCCG GAAAGAGAAGGCATG TERM 3394 4196252 - 4196212 - G 78 -15.3 -3.14647 | overlap 4196194 4196207 4196198 AGCGACGAGATCGAA CATCGCGGCGGCGCGGCGC CGC GCGACACGCCGCGTCAATG GAAACACCGCGGCAA TERM 3395 4196305 - 4196278 - G 72 -11.4 -3.5936 | gap 1, overlap 4196269 4196300 GGCAAAGCGCTGAAA GCGCGGATTCGAC AGA ATCGAAT-CGCGC CAACCGAGCAGCCGA TERM 3396 4196399 - 4196423 + r 74 -9.4 -3.90086 | gap 1, opp_overlap 4196399, overlap 4196392 GGCTGGGCTCCAGAA GCTTCGG-TCT GATG AGATCCGAAGC TTTAGATTGTTGTTT RPD_3759 4197350 - 4196484 - | polyprenyl synthetase RPD_3760 4197472 - 4199046 + | FAD dependent oxidoreductase RPD_3761 4199053 - 4200006 + | hydroxyneurosporene synthase RPD_3762 4200214 - 4200062 - | hypothetical protein TERM 3397 4200100 - 4200110 + g 74 -2.4 -4.84017 | CGCTCTTCGCCTTCT CCGC CTC GCGC TTTTTATCCAGCCTT RPD_3763 4200345 - 4200211 - | hypothetical protein RPD_3764 4201299 - 4200367 - | coproporphyrinogen III oxidase TERM 3398 4201471 - 4201438 - R 76 -8.9 -4.14392 | gap 1 GGCCAACTGCGAAAA CAGGCACTCG-GCC GGTTGAA GGCGCGAATGCCCG GGTCGAACCCGGGCA RPD_3765 4202547 - 4201498 - | squalene/phytoene synthase RPD_3766 4204079 - 4202544 - | amine oxidase RPD_3767 4205047 - 4204157 - | alpha/beta hydrolase fold RPD_3768 4206011 - 4205058 - | alpha/beta hydrolase fold hemE 4206123 - 4207169 + | uroporphyrinogen decarboxylase TERM 3399 4207215 - 4207196 - T 76 -10.6 -3.85704 | opp_overlap 4207196 CGATCAATGATCAAA GCCGGTGC GAAA GCGCCGGC TTTTTTCTTGCTGAC TERM 3400 4207196 - 4207215 + T 100 -12.8 -5.5112 | opp_overlap 4207196 CGATCAATGATCAAA GCCGGTGC GAAA GCGCCGGC TTTTTTCTTGCTGAC bchD 4209100 - 4207334 - | magnesium chelatase subunit D TERM 3401 4208483 - 4208521 + g 84 -13.3 -3.90112 | gap 2, opp_overlap 4208470 GATGCCGAGCGCCGC GGCGG-C-TGAGCAGATCG CTT CGATCTGCTCACGACCGAC TTTAATTCCAGCAAG TERM 3402 4209014 - 4208984 - G 71 -14.6 -2.52676 | CAGCGTCGCAAGCCA GCGGTCGCGCACCG GCC CCGCGCGCGAGCGC AGCAGCACACCGCCG RPD_3771 4210119 - 4209097 - | magnesium chelatase ATPase subunit I RPD_3772 4211120 - 4210128 - | porphobilinogen deaminase TERM 3403 4210371 - 4210389 + g 70 -10.2 -3.68827 | CACCTCGCGTTCAGC GTCGCAGC ACA GCCGCGAC TTTGGATCGTCGATC TERM 3404 4211232 - 4211216 - H 75 -12.3 -3.61715 | opp_overlap 4211215 4211213 4211212 4211209, overlap 4211195 GATTTTTCTTAAGAA CTCGGCT GGG AGCCGAG GTCGTTGATTTCGAG TERM 3405 4211630 - 4211599 - g 85 -13 -4.11216 | opp_overlap 4211599 GGCGCAGGGTGAAAA GCATCACCGCGCCA GCTT CGGCACGACGATGC TGCGTTGGGAGCAGC RPD_3773 4211369 - 4212682 + | hypothetical protein RPD_3774 4212682 - 4214283 + | hypothetical protein TERM 3406 4214692 - 4214729 + G 79 -13.4 -3.74251 | gap 1, opp_overlap 4214686 CGCTGAACATCATGC GGCTGCGGCGGATCGGG CTGGT CGCGATCGGCCGC-GCC TTTGATGCAGATCTA RPD_3775 4214283 - 4214771 + | hypothetical protein TERM 3407 4214798 - 4214814 + F 74 -5 -4.56597 | overlap 4214797 4214796 GACTTATGGCGAATG GCGACG ACCGC CGCCGC TTTTTAGAGAACAGG TERM 3408 4215180 - 4215193 + G 71 -3.1 -4.66833 | gap 1, overlap 4215179 GCCTTCGCGGCGATC GC-AGG CCA CCTCGC TTTTTACGCTTCGCG RPD_3776 4214835 - 4215332 + | hypothetical protein RPD_3777 4215326 - 4216558 + | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like RPD_3778 4216665 - 4217129 + | hypothetical protein TERM 3409 4217154 - 4217176 + T 100 -17 -4.07647 | opp_overlap 4217154 ATCGCGTCATAAAAA TCGGGGGCCT TTT GGGCCCCCGA TTTCGTTTCAAGTCT TERM 3410 4217176 - 4217154 - T 100 -16.3 -4.83169 | opp_overlap 4217154 ATCGCGTCATAAAAA TCGGGGGCC TTTTG GGCCCCCGA TTTCGTTTCAAGTCT RPD_3779 4217643 - 4217206 - | hypothetical protein RPD_3780 4220913 - 4217749 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 3411 4220269 - 4220299 + g 72 -13.2 -3.17212 | overlap 4220264 4220271 GCCGATGCTTCCCGA GGCGACCTGGGCGT TCT GCGCCTGGATCGCC TTGGTGACGTCGTCG TERM 3412 4220870 - 4220841 - G 74 -10 -3.78409 | GGAACGGAATCGAAA TCGCGCCGATCA AACAGA TGAACAGCGCGA TGACCCAGGCGAAGA RPD_3781 4222118 - 4220922 - | secretion protein HlyD TERM 3413 4222017 - 4222035 + g 77 -12.4 -3.71527 | TTCGGGTTTTTCCGT GGTGGCGG CGT TCGCCACC TTTGAATCGTTGCAG RPD_3782 4223995 - 4222451 - | putative monooxygenase TERM 3414 4224211 - 4224172 - R 100 -16.4 -4.6971 | opp_overlap 4224177 4224178, overlap 4224179 GAAAGCGCAACAAAA CGCAAAACGCCGCGGACA TTGC TGCCCGCGGCGCGTTGTG GCCTTGCGGCCGCCG TERM 3415 4224204 - 4224179 - R 100 -18.3 -4.4836 | opp_overlap 4224178 4224177, overlap 4224172 CAACAAAACGCAAAA CGCCGCGGACA TTGC TGCCCGCGGCG CGTTGTGGCCTTGCG RPD_3783 4224523 - 4224233 - | hypothetical protein RPD_3784 4225197 - 4224535 - | hypothetical protein RPD_3785 4226643 - 4225216 - | PUCC protein TERM 3416 4226803 - 4226777 - R 73 -10.9 -3.63228 | gap 1, overlap 4226773 4226778 4226781 CCGACTACAAAGCAA GCGACCGGGACC CTTG GATCCCGGTC-C AGCCACAACAGCTTC RPD_3786 4227011 - 4226832 - | antenna complex, alpha/beta subunit RPD_3787 4227179 - 4227024 - | antenna complex, alpha/beta subunit TERM 3417 4227199 - 4227188 - H 72 -2.2 -4.8048 | CTGCCATAGTAAAAA CCTC CTAA GAGA CTTTCGATCATTCGT TERM 3418 4229807 - 4229829 + G 70 -6.1 -4.20783 | opp_overlap 4229803 4229802 4229807, overlap 4229808 TCGCTCGAAATCGAA TCGGCGCCC GGCAG GGGCACCGC TTTGTTCGCTCGAAT RPD_3788 4227536 - 4229854 + | phytochrome TERM 3419 4229996 - 4229947 - g 76 -14.9 -3.15544 | overlap 4229980 GCTCAGCGGCATGAA GGCTCTCGTCGCCGGCGATCCCG CGAT CGAAATCGTCGGCGAGGCGAGCG ACGGGCCAAACGCGC RPD_3789 4229858 - 4230544 + | response regulator receiver RPD_3790 4230933 - 4230685 - | hypothetical protein RPD_3791 4232201 - 4230972 - | NnrS RPD_3792 4233021 - 4232329 - | NnrU TERM 3420 4233241 - 4233227 - R 71 -12.8 -3.02043 | overlap 4233214 AACCTGCGGCGAACA CCGCGC CGA GCGCGG CCTGCGCCTCCTGCT RPD_3793 4234862 - 4233210 - | phosphoglucomutase TERM 3421 4235590 - 4235610 + G 72 -13.9 -2.96711 | opp_overlap 4235590, overlap 4235583 CATGAACTGCGAAAA CGCGCGGGG CTG CCCGGCGCG TATCTCGATTATCGG TERM 3422 4235610 - 4235590 - g 85 -13.9 -4.15106 | opp_overlap 4235583 4235590 CATGAACTGCGAAAA CGCGCGGGG CTG CCCGGCGCG TATCTCGATTATCGG TERM 3423 4235727 - 4235751 + G 70 -13.5 -3.05384 | overlap 4235729 CGCGCTCCTCAGCGC CGCCACGACGC GGG GCGTCGCGGTG TTCGATGCCGAAGCC RPD_3794 4235125 - 4236360 + | FAD dependent oxidoreductase RPD_3795 4237201 - 4236368 - | hypothetical protein RPD_3796 4237726 - 4237352 - | response regulator receiver TERM 3424 4237432 - 4237415 - G 71 -9.1 -3.85698 | overlap 4237416 CGGCTTGGCCAGAAA CTGCCCG CCGT CGGGCAA ATCGGCTCCGGAAAC RPD_3797 4238693 - 4237857 - | metallophosphoesterase RPD_3798 4238971 - 4238714 - | putative transport system ATP-binding protein RPD_3799 4239355 - 4239624 + | hypothetical protein RPD_3800 4239893 - 4240360 + | hypothetical protein TERM 3425 4240385 - 4240423 + F 76 -13.1 -3.53012 | gap 1, opp_overlap 4240387 4240390, overlap 4240386 CATCAACGGTCGAAC AACG-ACGGCGGCGGGGA GCAT TCTCCGCCGCCGTTCGCA TTTCCAGCCCAACCG TERM 3426 4240386 - 4240422 + F 81 -16.6 -2.71712 | gap 1, opp_overlap 4240387 4240390, overlap 4240385 ATCAACGGTCGAACA ACG-ACGGCGGCGGGGA GCAT TCTCCGCCGCCGTTCGC ATTTCCAGCCCAACC TERM 3427 4240421 - 4240387 - f 100 -17.9 -3.63569 | gap 1, opp_overlap 4240386 4240385, overlap 4240390 TCAACGGTCGAACAA CG-ACGGCGGCGGGGA GCAT TCTCCGCCGCCGTTCG CATTTCCAGCCCAAC TERM 3428 4240417 - 4240390 - f 90 -18.4 -2.93252 | opp_overlap 4240386 4240385, overlap 4240387 ACGGTCGAACAACGA CGGCGGCGGGGA GCAT TCTCCGCCGCCG TTCGCATTTCCAGCC RPD_3801 4240707 - 4241420 + | GntR-like RPD_3802 4241433 - 4243232 + | amidase RPD_3803 4243434 - 4244237 + | peptidase C26 TERM 3429 4244336 - 4244317 - T 100 -15 -4.21922 | opp_overlap 4244311 4244317 CTACCCAAAATGAAA CGAGCGCC TTGC GGCGCTCG TTCTGCAGTTTCAAC TERM 3430 4244317 - 4244336 + T 83 -15 -3.39668 | opp_overlap 4244317, overlap 4244311 CTACCCAAAATGAAA CGAGCGCC TTGC GGCGCTCG TTCTGCAGTTTCAAC RPD_3804 4246250 - 4244391 - | dihydroxy-acid dehydratase RPD_3805 4247379 - 4246588 - | cyclic nucleotide-binding RPD_3806 4247418 - 4247723 + | hypothetical protein RPD_3807 4248229 - 4247765 - | hypothetical protein RPD_3808 4248464 - 4249990 + | AMP-dependent synthetase and ligase TERM 3431 4250089 - 4250046 - T 81 -2.4 -5.18726 | gap 1, opp_overlap 4250047 4250084 4250086, overlap 4250047 4250050 4250083 4250084 GCGTCAGAACAAAAA GTTAGAG-CTCCGGTTCTGAT TCT ATCAGAACCGGAAACGCTGTG AGCCGCGGCTTTATC TERM 3432 4250115 - 4250127 + T 78 -10.5 -4.08767 | opp_overlap 4250084, overlap 4250086 TTATCGTCCGGTGAA GCGCG GCG CGCGC TTTTCGACGAATGCC RPD_3809 4250876 - 4250100 - | enoyl-CoA hydratase/isomerase TERM 3433 4250748 - 4250805 + g 70 -10.3 -3.71284 | gap 1, overlap 4250749 4250763 CCGTACGGAGGCATC GGCCA-GCGCCGCGGTCAGCGCGGCGTT CAG ATCGCCGAGCAGACCGGGACGCATCGCG TTGTATTGCTCCGGA TERM 3434 4250749 - 4250804 + g 71 -13.8 -2.82449 | gap 1, overlap 4250748 4250763 CGTACGGAGGCATCG GCCA-GCGCCGCGGTCAGCGCGGCGTT CAG ATCGCCGAGCAGACCGGGACGCATCGC GTTGTATTGCTCCGG RPD_3810 4252066 - 4250921 - | acyl-CoA dehydrogenase-like RPD_3811 4252904 - 4252077 - | short-chain dehydrogenase/reductase SDR RPD_3812 4253354 - 4252932 - | MaoC-like dehydratase RPD_3813 4253797 - 4253351 - | hypothetical protein TERM 3435 4253443 - 4253453 + g 79 -2.4 -5.03994 | overlap 4253437 4253442 CCACGATCAGCGTCA GCGC GCC GCCC TTTTTGTCTGTGACG RPD_3814 4254992 - 4253808 - | lipid-transfer protein TERM 3436 4255750 - 4255728 - g 100 -12.6 -5.02074 | overlap 4255732 CGATCGGTCAAAAAA GCAAGCGCCG AAG CGGCGCCGGC TCCACGCACGAGAAA TERM 3437 4255746 - 4255732 - g 82 -12.8 -3.93166 | overlap 4255728 CGGTCAAAAAAGCAA GCGCCG AAG CGGCGC CGGCTCCACGCACGA RPD_3815 4255032 - 4255790 + | regulatory protein, TetR TERM 3438 4256943 - 4256922 - g 70 -12.9 -3.06815 | AGCGGCCGGAAGAGA CCGCCCGCG CCCT CGCCGGCGG CTGGATGCACACCGG RPD_3816 4255787 - 4257343 + | AMP-dependent synthetase and ligase TERM 3439 4257407 - 4257360 - T 95 -10.6 -4.4009 | opp_overlap 4257362, overlap 4257361 4257362 GCTCACGTTACAAAA CGTCTCACAGCATCGGCCTG AGTTGAAA CTGGCCGATGCTGTGAAATT TTCCAGTGGCGCTGT TERM 3440 4257406 - 4257361 - T 76 -14.1 -3.23733 | opp_overlap 4257362, overlap 4257360 4257362 CTCACGTTACAAAAC GTCTCACAGCATCGGCCTG AGTTGAAA CTGGCCGATGCTGTGAAAT TTTCCAGTGGCGCTG TERM 3441 4257362 - 4257405 + T 100 -15.4 -4.13945 | opp_overlap 4257361 4257360 4257362 TCACGTTACAAAACG TCTCACAGCATCGGCCTG AGTTGAAA CTGGCCGATGCTGTGAAA TTTTCCAGTGGCGCT TERM 3442 4257405 - 4257362 - T 83 -17.6 -2.53918 | opp_overlap 4257362, overlap 4257361 4257360 TCACGTTACAAAACG TCTCACAGCATCGGCCTG AGTTGAAA CTGGCCGATGCTGTGAAA TTTTCCAGTGGCGCT RPD_3817 4258068 - 4257364 - | hypothetical protein RPD_3818 4259283 - 4258090 - | phosphonate metabolism PhnM RPD_3819 4260056 - 4259280 - | putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) RPD_3820 4260113 - 4260925 + | phosphonate ABC transporter ATP-binding TERM 3443 4260980 - 4260932 - f 81 -13.8 -3.65351 | gap 1, opp_overlap 4260932 4260927 GCAGCCTGATTGAAA CGCCCCGCTCACGCGCAGCCTGC GGTC GCAGACTGCG-GCGAGACGGCCG TATGATTCTTCAACA RPD_3821 4261010 - 4261951 + | phosphonate-binding periplasmic protein TERM 3444 4261968 - 4261996 + F 100 -16.8 -5.08824 | gap 1, overlap 4261963 4261969 TCCCAGCATTTCCCG C-GGGCCGGATCC TTCG GGATCCGGCCCTG TTTTTTGCGTACCGA TERM 3445 4261969 - 4261994 + F 100 -20.5 -4.17608 | overlap 4261963 4261968 CCCAGCATTTCCCGC GGGCCGGATCC TTCG GGATCCGGCCC TGTTTTTTGCGTACC TERM 3446 4262423 - 4262401 - g 70 -9.9 -3.63744 | gap 1, opp_overlap 4262401 4262386, overlap 4262399 TCGCCGCCCAAAATA CAGC-GCCAC ATCC GTGGCTGCTG TTCGTGACGCGGCGC RPD_3822 4262001 - 4262903 + | phosphonate ABC transporter permease RPD_3823 4262900 - 4263748 + | phosphonate ABC transporter permease RPD_3824 4264488 - 4263760 - | GntR family transcriptional regulator RPD_3825 4264565 - 4265068 + | phosphonate metabolism PhnG TERM 3447 4265306 - 4265318 + G 75 -9.1 -4.09685 | overlap 4265281 ACACGCCGGCCGTGA CGCAG TGG CTGCG TTTTCACACCTCGGC phnH 4265071 - 4265679 + | carbon-phosphorus lyase complex subunit RPD_3827 4265679 - 4266785 + | phosphonate metabolism RPD_3828 4266782 - 4267663 + | phosphonate metabolism PhnJ phnK 4267656 - 4268456 + | phosphonates transport ATP-binding protein TERM 3448 4269111 - 4269061 - g 72 -6.7 -4.26327 | gap 1, opp_overlap 4269108 GATCGACGAAAAGAA GCGCG-ATGGCGTCGCCATGATCG CCAT CGTCCACGACGACGAGGTGCGCGC ACGGATCGCCGACCG RPD_3830 4268453 - 4269163 + | phosphonate C-P lyase system, PhnL RPD_3831 4269179 - 4270333 + | phosphonate metabolism PhnM RPD_3832 4270330 - 4270923 + | phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN RPD_3833 4270932 - 4271549 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 3449 4271602 - 4271560 - T 71 -14.1 -2.53263 | opp_overlap 4271566 4271577, overlap 4271566 4271593 GGTAGGGCGAACGGA CCGAAAGCGCGAGACCGCC GAGCT GGCGATGAAGCGCTTTCGG CGCCACTCAGTTATG RPD_3834 4272140 - 4271613 - | Ferritin and Dps TERM 3450 4272353 - 4272331 - H 76 -5.5 -4.63218 | gap 1 GTTGCTGGAACAAAA TCGGGCGCGG ACTT CCGCTC-CGA AGGACGATCCGGCCG RPD_3835 4272420 - 4273115 + | methyltransferase type 12 TERM 3451 4274101 - 4274070 - g 76 -8.6 -4.19704 | gap 1, overlap 4274071 CAAGGCGATCGAAAA GGCCCGCGCCGACAC CGC GCG-CGACGCGGAGC TCCGCCGCATCGCCG TERM 3452 4274544 - 4274567 + G 74 -12.4 -3.58343 | gap 1, overlap 4274545 CACCATCGAGGCGGC TCGC-GCCGGC GAC GCCGGCCGCGG TTTCGCCGTGGTCGC RPD_3836 4273282 - 4275267 + | Cache, type 2 RPD_3837 4276549 - 4275356 - | putative deoxyribonuclease TERM 3453 4276034 - 4276013 - G 70 -10.1 -3.63569 | gap 1 GCAATCGGTGAAGAA GCCGCCG-CC CTG GATCGGCGGC AATTGCGCCGGATCG RPD_3838 4277468 - 4276641 - | transglutaminase-like RPD_3839 4277761 - 4278030 + | hypothetical protein RPD_3840 4278070 - 4278345 + | hypothetical protein RPD_3841 4278483 - 4278638 + | hypothetical protein TERM 3454 4278779 - 4278738 - T 76 -9.9 -3.85698 | opp_overlap 4278743 4278753 4278755 CGCCGTTTGCACAAA GGCCCGCGCCTCGCCACCG CCGG CGGCGGGGATCGGCAGGCC GCCGTCGGCGTATTC RPD_3842 4280099 - 4278720 - | two component, sigma54 specific, transcriptional regulator, Fis family TERM 3455 4278755 - 4278789 + g 78 -15 -3.25539 | opp_overlap 4278738, overlap 4278753 4278743 CCCGCGCCTCGCCAC CGCCGGCGGCGG GGATCGGCAGG CCGCCGTCGGCG TATTCGTTGAGCTTG TERM 3456 4279378 - 4279342 - G 73 -13.8 -3.11291 | gap 2, overlap 4279334 GCGAGAATCCGAATA TCGACCGGCACCGGACGG CTG CCG-CCGACGC-GGTCGA TCACCCGCTCCTGGA RPD_3843 4280499 - 4280149 - | flagellar motor switch protein fliH 4281135 - 4280518 - | flagellar assembly protein H fliG 4282223 - 4281135 - | flagellar motor switch protein G fliF 4283828 - 4282230 - | flagellar MS-ring protein TERM 3457 4282564 - 4282592 + g 71 -9.6 -3.87815 | gap 1, opp_overlap 4282563 4282565, overlap 4282565 TTGGTGAACTGAAAC ATGCC-GAGCAGG CCGG CCTGCTCCGGCAG TTTCTCGACCTGCGG TERM 3458 4282591 - 4282565 - G 75 -13.1 -3.46068 | gap 1, opp_overlap 4282565 4282564, overlap 4282563 TGGTGAACTGAAACA TGCC-GAGCAGG CCGG CCTGCTCCGGCA GTTTCTCGACCTGCG TERM 3459 4282697 - 4282740 + g 71 -3.1 -4.5774 | gap 2, overlap 4282665 CCAGCGCCGCGATGC GGTCGAGCTGCTCCTTCGGCC GCTC GGC-GTAG-ACCAGTTCGCCC TTTTCGTTCTTGGTG TERM 3460 4283799 - 4283745 - G 100 -9.8 -4.82855 | GACGAAAGCGAAAAA CCCGAGCAGCGCCACGGTGACGGCGA TCA TGGCCATCACCCGGGCAGCGCCCAAG CCTTTCAGAAAACCC TERM 3461 4283968 - 4283944 - R 70 -10 -3.60234 | gap 2, opp_overlap 4283936 4283944 GCAGATATGTTGAAA GCCGGCTTCCCG AGA CGGG--GCCGGC TTTCAGGAATTCATT TERM 3462 4283944 - 4283968 + r 70 -10 -3.58305 | gap 2, opp_overlap 4283944, overlap 4283936 GCAGATATGTTGAAA GCCGGCTTCCCG AGA CGGG--GCCGGC TTTCAGGAATTCATT RPD_3847 4284278 - 4284003 - | hypothetical protein RPD_3848 4286153 - 4284555 - | FAD linked oxidase-like TERM 3463 4286002 - 4286054 + g 83 -13.6 -3.88787 | CGCGGTTCAGGCAGC TTCAGGTCGCCG-AGCTTCGGCACCG CGA TGGTGTCGAAGCTGTCGCGGCC-GAA TTTCTGCCGGTATCG TERM 3464 4286284 - 4286325 + r 100 -18.2 -4.07133 | ACGGGCCAGCGCAAC GCTGGAGCGGGATGAC TTGCCTTGTC GTCATCCTGCTCCAGC TTGTTTCTCAGCATC TERM 3465 4286345 - 4286373 + r 72 -13.9 -2.80074 | opp_overlap 4286353, overlap 4286353 TTCTCAGCATCGACT TTCCGAAAGCCGG CGT CCGCCTTTCGGGA TCATGTTCTAGAAAG RPD_3849 4288435 - 4286381 - | Outer membrane autotransporter barrel TERM 3466 4288115 - 4288134 + g 71 -15 -2.64616 | opp_overlap 4288110 GTCGACGAAATTGGT GCTGCCGG TAAA CCGGCAGC TCGTATAAGTGGGAC TERM 3467 4288222 - 4288194 - G 71 -3.2 -4.67641 | gap 2 AGCGTAAAAGGAAAA TACGGGATGCTGAC CGT GCC-GC-TCCCATA GGTTCCGATCAGGCG TERM 3468 4288566 - 4288576 + r 71 -8.2 -3.90744 | GAAACGTTCGATCTC GCGG TAT CCGC TTATTTCAGCGCGAG RPD_3850 4289115 - 4288582 - | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 3469 4288997 - 4289009 + g 77 -10.5 -3.90112 | AGGCTGCGGCCCAGA CGGCG GCG CGCCG TTTCGTTGACCAGCG RPD_3851 4290629 - 4289118 - | NADH-ubiquinone oxidoreductase, chain 49kDa RPD_3852 4292097 - 4290646 - | hydrogenase 4 subunit F RPD_3853 4292756 - 4292094 - | hypothetical protein RPD_3854 4293709 - 4292759 - | respiratory-chain NADH dehydrogenase, subunit 1 TERM 3470 4292951 - 4292918 - G 78 -13.8 -3.58726 | gap 1, opp_overlap 4292913 CTTGCCCATATACAA CGCCGCGCCCGCGAG ATAGG CCAGCGGGC-CGGCG CCGAATATTCCGATG RPD_3855 4295724 - 4293706 - | hydrogenase 4 subunit B TERM 3471 4294416 - 4294391 - G 75 -11.7 -3.72893 | overlap 4294393 4294394 TAGGCCTTGACGAAA CACGCCGCCGC CAGC GCGGCGGCCAG CGCCATCAGCCCGCC TERM 3472 4294414 - 4294393 - G 75 -12.9 -3.44848 | overlap 4294391 4294394 GGCCTTGACGAAACA CGCCGCCGC CAGC GCGGCGGCC AGCGCCATCAGCCCG TERM 3473 4294413 - 4294394 - G 77 -16.4 -2.66695 | overlap 4294393 4294391 GCCTTGACGAAACAC GCCGCCGC CAGC GCGGCGGC CAGCGCCATCAGCCC TERM 3474 4296009 - 4296044 + G 95 -7 -5.30155 | gap 1, opp_overlap 4296018, overlap 4296010 4296011 TCATCTATTCCTGGT CAGCACA-AATGATGTC TTA GACATCATTCTGTGCGC TTTTTTGGTTGCTCC TERM 3475 4296010 - 4296043 + G 74 -10.5 -3.77008 | gap 1, opp_overlap 4296018, overlap 4296009 4296011 CATCTATTCCTGGTC AGCACA-AATGATGTC TTA GACATCATTCTGTGCG CTTTTTTGGTTGCTC TERM 3476 4296011 - 4296042 + G 71 -14 -2.85121 | gap 1, opp_overlap 4296018, overlap 4296010 4296009 ATCTATTCCTGGTCA GCACA-AATGATGTC TTA GACATCATTCTGTGC GCTTTTTTGGTTGCT TERM 3477 4296034 - 4296018 - g 73 -9.5 -3.96148 | opp_overlap 4296011 4296010 4296009 CCTGGTCAGCACAAA TGATGTC TTA GACATCA TTCTGTGCGCTTTTT RPD_3856 4295752 - 4296096 + | hypothetical protein RPD_3857 4296167 - 4297009 + | cobalamin 5'-phosphate synthase RPD_3858 4297363 - 4297019 - | putative formamidase regulatory protein FmdB RPD_3859 4298692 - 4297463 - | formamidase TERM 3478 4298500 - 4298528 + g 73 -9.5 -3.99374 | opp_overlap 4298499, overlap 4298501 4298503 GCACGATCGACAGAT CGATATCGCGGAC GTC GTCCGCGGAATCA TTGTTCTTGATGAAG TERM 3479 4298501 - 4298527 + g 70 -13 -2.99142 | opp_overlap 4298499, overlap 4298500 4298503 CACGATCGACAGATC GATATCGCGGAC GTC GTCCGCGGAATC ATTGTTCTTGATGAA RPD_3860 4299427 - 4298738 - | ABC transporter related RPD_3861 4300194 - 4299439 - | ABC transporter related TERM 3480 4300074 - 4300084 + g 70 -2.4 -4.64676 | TAGGGCCGATGATCA CGCG AAT CTCG TTTTCTTCGACGTAG RPD_3862 4301356 - 4300205 - | inner-membrane translocator RPD_3863 4302297 - 4301371 - | inner-membrane translocator RPD_3864 4303732 - 4302470 - | amide-urea binding protein RPD_3865 4303889 - 4307257 + | ATP-binding region, ATPase-like RPD_3866 4307247 - 4308176 + | response regulator receiver RPD_3867 4308438 - 4308280 - | hypothetical protein RPD_3868 4309141 - 4308443 - | hypothetical protein RPD_3869 4309560 - 4309168 - | hypothetical protein RPD_3870 4310146 - 4309565 - | hypothetical protein TERM 3481 4309918 - 4309961 + g 72 -8.6 -4.11216 | overlap 4309940 CGCGCTCCTTGATCG TCTCGCCGGCTTCGGACGCG AACT CCCTGGCGGCGCCGGCGAGA TTTTCGGCCTGAGCG RPD_3871 4311390 - 4310167 - | late embryogenesis abundant protein TERM 3482 4313246 - 4313197 - g 81 -11.3 -4.07687 | gap 1 ACGCGCTGCCGAAAA CCGG-CAAGGGCGAGATCGACCGC GCA GCGGTCAAGTCCGCCCACGGCCAG GCTTAGCTCGCACCG RPD_3872 4311744 - 4313252 + | AMP-dependent synthetase and ligase TERM 3483 4313313 - 4313278 - T 81 -15.4 -3.05384 | gap 1 TTTCGTCGGACGTAA GGTCGGGCCCAGGTCGG TCA CCGTCCTGG-CCCGACG TCCATATCAAGGACC TERM 3484 4313324 - 4313340 + T 75 -13.7 -3.02461 | opp_overlap 4313324 CGACGTCCATATCAA GGACCCG TCT CGGGTCC TGTTGGGCCGGCTTC TERM 3485 4313340 - 4313324 - T 77 -13.7 -3.26471 | opp_overlap 4313324 CGACGTCCATATCAA GGACCCG TCT CGGGTCC TGTTGGGCCGGCTTC RPD_3873 4313632 - 4313354 - | hypothetical protein RPD_3874 4313819 - 4314553 + | dienelactone hydrolase TERM 3486 4315168 - 4315222 + G 78 -15.7 -3.19653 | gap 1, overlap 4315169 4315217 ATTGTTCGTCATCCT GGCGGTGATGATCCGCGCCGGCGCGC TGAA GCGTCCCGGCGTG-ATCATCGGCGCG TTCCTCGCCTTCTAC TERM 3487 4315169 - 4315221 + G 93 -19.2 -2.51471 | gap 1, overlap 4315168 4315217 TTGTTCGTCATCCTG GCGGTGATGATCCGCGCCGGCGCGC TGAA GCGTCCCGGCGTG-ATCATCGGCGC GTTCCTCGCCTTCTA RPD_3875 4314572 - 4315438 + | prolipoprotein diacylglyceryl transferase RPD_3876 4315435 - 4316565 + | hypothetical protein TERM 3488 4316871 - 4316813 - g 71 -12.1 -3.28924 | gap 1, opp_overlap 4316838 GATGCCGTGGGACAA CGCCTCGCGCC-CCCGCGCCGACGCGCT GGTC ACCGCGACGCCGGGGCTGGCGCTCGGCG TCACCGCCGCGGATT TERM 3489 4317054 - 4317089 + G 72 -11.8 -3.54424 | CCGCTGATCCGCCAG CCGAGCTATGAGGTCG GCGA CGACTTCGTCGCCCGG TTTACCGACGTCGAC RPD_3877 4316562 - 4317329 + | hypothetical protein RPD_3878 4317574 - 4318200 + | hypothetical protein TERM 3490 4318244 - 4318232 - f 76 -6.9 -4.4648 | overlap 4318234 ATCCGCATCAGAAAA CCGCC CGC GACGG GTTGCCATCGGACGC TERM 3491 4318954 - 4318923 - g 73 -13 -3.25088 | gap 1, overlap 4318915 4318948 TGCCAAACGGATCAA CGCGCCGCTCG-CGA TCA TCGACAAGCGCCGCG AACGCGCCGGTGAAT RPD_3879 4318357 - 4319310 + | ribose-phosphate pyrophosphokinase RPD_3880 4320086 - 4319553 - | riboflavin synthase subunit beta TERM 3492 4320196 - 4320224 + H 73 -3.1 -4.78237 | opp_overlap 4320192, overlap 4320212 GTGAAATCCAACCGC CGGACTCGG CCGAAGCGAAT CCGATTCCG TTTTGTTCTCCGCTC TERM 3493 4320761 - 4320742 - g 75 -9.3 -4.0827 | opp_overlap 4320758 ATATATGGACACAAA CCGGTAC GATCAT GTACCGG CAGGCGCTGGTGCTG RPD_3881 4320402 - 4320941 + | hypothetical protein TERM 3494 4320948 - 4320992 + F 72 -12.1 -3.29829 | gap 2, overlap 4320987 GAAGCCTGATCCGCC GCGCGCGGCGGACGATCCTGC ATGGC GCGGGTTCG-C-GCCGAGCGC TTGTGACGCCCTCTC TERM 3495 4321050 - 4321021 - f 79 -8.5 -4.36914 | gap 1, overlap 4321033 TCTGTTCCCATAAAA CGCCTGCGAGAACG CGC CGCCGTCGC-GGCG CGCGATGGATGCTCG TERM 3496 4321052 - 4321033 - f 88 -16.4 -3.2964 | overlap 4321021 AAACGCCTGCGAGAA CGCGCCGC CGTC GCGGCGCG CGATGGATGCTCGCC TERM 3497 4321302 - 4321321 + G 76 -6.4 -4.56597 | gap 1, overlap 4321303 GTGTCGACGATGGTG GTC-GCGGT GAA GCCGCAGAC TTTTTCCGGCGCCGC RPD_3882 4321059 - 4321904 + | pyrroline-5-carboxylate reductase RPD_3883 4323341 - 4321953 - | periplasmic sensor signal transduction histidine kinase TERM 3498 4322899 - 4322930 + g 77 -13 -3.57462 | gap 1, opp_overlap 4322875 4322904 CCGACGGAGTCGATC CAGAACGGCCGCGCG ATC TG-GCGGCCGATCTG TTTCGAGATCGACTG RPD_3884 4324072 - 4323347 - | winged helix family two component transcriptional regulator TERM 3499 4323982 - 4323966 - G 83 -9.4 -4.37886 | TCACTGGCGAGAAAA CGCGAC AGCAG GTCGCG GATACGGCGGTCGTC RPD_3885 4324626 - 4324069 - | MarR family transcriptional regulator TERM 3500 4324312 - 4324278 - G 82 -11.5 -4.07568 | gap 2, opp_overlap 4324283 4324284 4324305 4324309, overlap 4324281 TTGCGGTGGCGAAAA GAAGGCGCTGGCGACGG TCG CTGTCGCC-G-GCCTTC TGCACGATGTAGCCC TERM 3501 4324309 - 4324281 - G 74 -7.4 -4.17048 | gap 2, opp_overlap 4324283 4324284 4324305, overlap 4324278 CGGTGGCGAAAAGAA GGCGCTGGCGACGG TCG CTGTCGCC-G-GCC TTCTGCACGATGTAG TERM 3502 4324283 - 4324309 + g 71 -12.2 -3.30771 | opp_overlap 4324281 4324278, overlap 4324284 4324305 GTGGCGAAAAGAAGG CGCTGGCGACGG TCG CTGTCGCCGGCC TTCTGCACGATGTAG TERM 3503 4324284 - 4324308 + g 74 -15.7 -2.58249 | opp_overlap 4324281 4324278, overlap 4324283 4324305 TGGCGAAAAGAAGGC GCTGGCGACGG TCG CTGTCGCCGGC CTTCTGCACGATGTA RPD_3886 4324877 - 4325989 + | branched-chain amino acid aminotransferase TERM 3504 4326062 - 4326027 - T 70 -11.8 -3.20348 | gap 1, opp_overlap 4326033, overlap 4326030 TCGACGAACACCGAA GGAGCACGGCG-GGGCA ACG CGCTCACGCCGTGCTCT CGCTGTCCCTGCGCG RPD_3887 4326273 - 4326049 - | hypothetical protein RPD_3888 4326375 - 4326719 + | hypothetical protein RPD_3889 4327640 - 4326756 - | hypothetical protein RPD_3890 4327905 - 4328060 + | antenna complex, alpha/beta subunit RPD_3891 4328073 - 4328276 + | antenna complex, alpha/beta subunit TERM 3505 4328346 - 4328297 - f 100 -22.1 -3.49475 | gap 1, opp_overlap 4328298 4328299 4328301 4328304, overlap 4328299 CTTACTTCGACATAA TAGC-CAACGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCGTTGTGCGT TTTGAGGATCGCGAT TERM 3506 4328298 - 4328345 + F 100 -23.4 -4.11216 | gap 1, opp_overlap 4328297 4328299, overlap 4328299 4328301 4328304 TTACTTCGACATAAT AGC-CAACGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCGTTGTGCG TTTTGAGGATCGCGA TERM 3507 4328299 - 4328344 + F 100 -26.9 -3.06515 | gap 1, opp_overlap 4328297 4328299, overlap 4328298 4328301 4328304 TACTTCGACATAATA GC-CAACGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCGTTGTGC GTTTTGAGGATCGCG TERM 3508 4328344 - 4328299 - f 100 -29.1 -3.32202 | gap 1, opp_overlap 4328299 4328298 4328301 4328304, overlap 4328297 TACTTCGACATAATA GC-CAACGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCGTTGTGC GTTTTGAGGATCGCG TERM 3509 4328301 - 4328341 + F 100 -28.3 -2.75081 | opp_overlap 4328299 4328297, overlap 4328299 4328298 4328304 CTTCGACATAATAGC CAACGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCGTTG TGCGTTTTGAGGATC TERM 3510 4328304 - 4328338 + F 100 -24.2 -3.52113 | opp_overlap 4328299 4328297, overlap 4328301 4328299 4328298 CGACATAATAGCCAA CGCCCGCCGCGGCCCC TTG GGGACCTCGGCGGGCG TTGTGCGTTTTGAGG TERM 3511 4328575 - 4328586 + F 85 -3.6 -5.33405 | GATGATGACCGGGCG CGCC GAGT GGTG TTTTTCTTTGATCGA RPD_3892 4328844 - 4329062 + | hypothetical protein TERM 3512 4329091 - 4329113 + T 100 -13.4 -4.4078 | opp_overlap 4329079, overlap 4329089 4329107 CAACGCCCATCCTCG CGCGCCGC TGTCTTC GCGGCGCG TTTTGATTCGAAAGA TERM 3513 4329184 - 4329134 - T 100 -20.5 -3.76634 | gap 1, opp_overlap 4329107, overlap 4329166 ATTCGAAAGACACAA CCGCCGTCATTCCGGGGCGCTCGC GCAA GCGAGCGCCCCGGAATC-CATCAG CCCAGTGCGCGCGTT RPD_3893 4330936 - 4329311 - | hypothetical protein TERM 3514 4330671 - 4330688 + g 77 -12.7 -3.65046 | CCCGGACGCGCGGCC TCGCCGG CGGG CCGGCGA TTCTTCAGCTCGGCG RPD_3894 4332266 - 4330974 - | adenylosuccinate synthetase TERM 3515 4331516 - 4331539 + g 72 -13.8 -3.02144 | opp_overlap 4331487 GACCCATGCCGGTCC CGGTCGCGGC CTGC GCCGCCACCG TGTTCGACGAGGTGA RPD_3895 4332590 - 4333414 + | aldo/keto reductase RPD_3896 4334065 - 4333439 - | methyltransferase type 11 TERM 3516 4335587 - 4335608 + G 82 -11.5 -4.05877 | CGGCGTCCGGCTGAT CGGCGCCAA CCGC TCGGCGCCG TTCTTTCATCTCATC RPD_3897 4334718 - 4335755 + | hypothetical protein TERM 3517 4335748 - 4335762 + T 70 -7.8 -4.07568 | opp_overlap 4335734, overlap 4335704 4335704 AGCCCGCGGCACCTT CAGCCT GAC GGGCTG TTTTCCCGCGCACGA RPD_3898 4336222 - 4335788 - | hypothetical protein RPD_3899 4336482 - 4337327 + | hypothetical protein TERM 3518 4337385 - 4337327 - f 100 -22 -2.82623 | gap 4 GGGGCCGCAGAAGTA GCGCCACCCACCGTCATTCCGGGTTCGCGC TGG GCGCGC-CCCGGAATGACG--GGGTGG-GC GGCGAAAGGCGGCTC TERM 3519 4338240 - 4338276 + G 100 -20.1 -3.20858 | TCTGTGCTTCAACCG CGGCGTCGAGCTGATCG GCC CGAACCGCTCGGCGCCG TTCCTGCATATGATG RPD_3900 4337380 - 4338405 + | hypothetical protein TERM 3520 4339083 - 4339037 - g 78 -14.4 -3.53091 | overlap 4339071 4339072 4339073 ACCTTCGCCCGCAAA GCCGGGATCGACCTTCTGCACG TGC CGTACAAAAGCTCGCCGCCGGC GATGAACGACGTCAT TERM 3521 4339108 - 4339071 - g 72 -5.4 -4.37092 | gap 1, overlap 4339037 4339072 4339073 ACGTGCCGTACAAAA GCTCGCCGCCGGCGATG AACGA CGTCATCGGCGG-GCGC ATCACCATGATGTTC RPD_3901 4338509 - 4339486 + | hypothetical protein TERM 3522 4339543 - 4339504 - T 93 -19.4 -3.18264 | gap 1, opp_overlap 4339506, overlap 4339506 CGGCCTACCGACCAA TACGCCGACATGCCCGGGC TTG ACCCGGGCATGTCG-CGTT TCGGGATCGCGCGCT TERM 3523 4339506 - 4339541 + T 100 -21.3 -3.57144 | gap 1, opp_overlap 4339504 4339506 GCCTACCGACCAATA CGCCGACATGCCCGGG CTTGA CCCGGGCATGTCG-CG TTTCGGGATCGCGCG TERM 3524 4339541 - 4339506 - T 100 -22 -3.1552 | gap 1, opp_overlap 4339506, overlap 4339504 GCCTACCGACCAATA CGCCGACATGCCCGGGC TTG ACCCGGGCATGTCG-CG TTTCGGGATCGCGCG RPD_3902 4340528 - 4339557 - | rubrerythrin TERM 3525 4340896 - 4340874 - g 71 -3.3 -4.62069 | overlap 4340875 CGCCGATCTGAAAAA CGCCGGCAA GTACA CCACCGGCA AACGTGTCGAGGCGC TERM 3526 4341943 - 4341927 - g 73 -12.3 -3.37796 | overlap 4341937 CTTCACCATCGAGAA CGTCGAC AAG GTCGACG ATCGTCACATCATCG RPD_3903 4340710 - 4342065 + | hypothetical protein TERM 3527 4342166 - 4342120 - T 88 -16 -3.25942 | gap 1, overlap 4342121 AGGGTGGCAGACGAA GGCT-GCCGGATGAGGGGACA TTGCAT TGCCCCCTCATCCGGCCAAGC TCATCCAGCCAAACT TERM 3528 4342166 - 4342121 - T 83 -17.1 -2.55351 | gap 2, overlap 4342120 GGGTGGCAGACGAAG GC-T-GCCGGATGAGGGGACA TTGCAT TGCCCCCTCATCCGGCCAAGC TCATCCAGCCAAACT RPD_3904 4343948 - 4342248 - | chemotaxis sensory transducer TERM 3529 4342886 - 4342924 + g 71 -15.2 -2.52464 | CCGAACTCGACAGTT CCTCGGCCGCCGCCGCCA CCG TGCCGATGGTGGTCGAGG TCGATTGCGACGCCG TERM 3530 4344089 - 4344122 + r 72 -3.7 -4.59773 | opp_overlap 4344095, overlap 4344091 4344092 ATGAATCAGAGACAA AAAAAATCCCTCCCC GGAT GGGGAGGGATCGATA TTTTTGACGATCAGC TERM 3531 4344116 - 4344095 - R 100 -15.9 -6.06529 | opp_overlap 4344092 4344091 4344089 CAGAGACAAAAAAAA TCCCTCCCC GGAT GGGGAGGGA TCGATATTTTTGACG RPD_3905 4345749 - 4344160 - | D-3-phosphoglycerate dehydrogenase RPD_3906 4347087 - 4345918 - | phosphoserine aminotransferase RPD_3907 4348580 - 4347306 - | chemotaxis sensory transducer RPD_3908 4349109 - 4348585 - | methyl-accepting chemotaxis sensory transducer RPD_3909 4349742 - 4349272 - | GCN5-related N-acetyltransferase TERM 3532 4349311 - 4349348 + g 77 -7.6 -4.42386 | gap 1, opp_overlap 4349311 4349329 GTGGCTGGGATCAAA GCCGAGCCGGC-CGTAG AACCG CTGCGCGTCGACGCGGC TTTTGTGGGTGAACA RPD_3910 4350344 - 4349739 - | glutathione S-transferase-like TERM 3533 4349966 - 4349911 - G 70 -10.3 -3.72576 | gap 1 TCTCCCGCCAGGAAA GCCGAGC-CGGCGAGATGGCGCTCCA TCAGC TGCAACGCCGCCACGCCGCGCTTGAC CCGGTCAGGATCGCG RPD_3911 4351209 - 4350415 - | hypothetical protein TERM 3534 4351323 - 4351301 - R 100 -20.6 -5.27335 | opp_overlap 4351301 GCGCGCAAACAAAAA CGGCGCGGGA AGC TCCCGCGCCG TTAGTAATCGTTAAC TERM 3535 4351301 - 4351323 + r 95 -20.6 -3.25015 | opp_overlap 4351301 GCGCGCAAACAAAAA CGGCGCGGGA AGC TCCCGCGCCG TTAGTAATCGTTAAC RPD_3912 4352206 - 4351364 - | hypothetical protein TERM 3536 4352392 - 4352436 + r 87 -6.1 -5.18726 | gap 4, opp_overlap 4352397 4352418, overlap 4352346 4352392 4352393 4352395 GCGCGGCGATGATCA GT-AGAGCTTTTCCGGTTCTGAT AGA ATCAGAACCGG--A-GCTCTAAC TTTTTGTTCTGACGC RPD_3913 4353818 - 4352553 - | major facilitator transporter TERM 3537 4353900 - 4353876 - R 86 -12.8 -4.07618 | TCGCCAACAACGAAA CACGGCCGGC ACGAG GCCGACCGCG GTCAAAATAGGACGT RPD_3914 4355351 - 4353999 - | phosphoglucosamine mutase TERM 3538 4354918 - 4354934 + g 72 -5.1 -4.30719 | overlap 4354916 CGAGCCCGGCCAAGG CTGGC GCTCGCA GCCAG TTTCTTGTCGAGCGA TERM 3539 4355511 - 4355475 - R 75 -4.4 -4.7908 | gap 1, opp_overlap 4355478 4355479, overlap 4355477 4355480 AAAAATATAAAGAAA GATTACGCGTCGCCTGC CGGA GCAGACGACGCA-AGTT GTTGAAAACTCGGAA TERM 3540 4355507 - 4355480 - R 81 -15.6 -3.00214 | opp_overlap 4355479 4355478, overlap 4355477 4355475 TATAAAGAAAGATTA CGCGTCGCCTGC CGGA GCAGACGACGCA AGTTGTTGAAAACTC RPD_3915 4355736 - 4355563 - | hypothetical protein TERM 3541 4355659 - 4355676 + g 74 -5.5 -4.53419 | opp_overlap 4355646 ATCCTCGAGACCCTC CTCGAGC TGCT GGTCGAG TTTCTTCTTCTCGTC TERM 3542 4355811 - 4355782 - H 71 -10.7 -3.44146 | gap 1, opp_overlap 4355783, overlap 4355778 4355783 GTCTTGCAGAAGCAA CG-CGCCGGAACCG GCG CTGTTCCAGCGACG GGGCGGCACCACGCG TERM 3543 4356686 - 4356661 - g 86 -16.9 -3.22223 | CAAGCTGATCATCAA GGGCATCCTCG ACGT CGAGGACGCCC GCGAGGCGGTGAAGG RPD_3916 4355903 - 4357042 + | L-lactate dehydrogenase (cytochrome) RPD_3917 4357187 - 4358002 + | enoyl-CoA hydratase/isomerase TERM 3544 4358452 - 4358427 - g 74 -10.3 -3.85817 | overlap 4358428 ACCGGCGCCGAGAAA GCGGCGCTCGC GGGC GCGAGCGGCGG CGTGGCTGTCGCGAT TERM 3545 4358451 - 4358428 - g 71 -13.8 -2.91276 | overlap 4358427 CCGGCGCCGAGAAAG CGGCGCTCGC GGGC GCGAGCGGCG GCGTGGCTGTCGCGA RPD_3918 4358100 - 4358729 + | hypothetical protein RPD_3919 4359707 - 4358856 - | shikimate 5-dehydrogenase RPD_3920 4359982 - 4359704 - | XRE family transcriptional regulator TERM 3546 4359924 - 4359904 - G 73 -11.1 -3.64703 | opp_overlap 4359904 4359899 TGGTGGGCACCGAAA CGCCGGCGA GCT TCGCCAACG TCCGTTGGTCGATCC TERM 3547 4360072 - 4360028 - R 93 -18.1 -3.38046 | opp_overlap 4360033, overlap 4360029 4360033 CGGCTATCGCAAATA TGAAACGGCTTCAACGATGGT TGA AACATCATTGAAGCCGTTTCG TCTCGACTTGAAGTC TERM 3548 4360071 - 4360029 - R 100 -21.6 -2.62613 | opp_overlap 4360033, overlap 4360028 4360033 GGCTATCGCAAATAT GAAACGGCTTCAACGATGGT TGA AACATCATTGAAGCCGTTTC GTCTCGACTTGAAGT TERM 3549 4360033 - 4360067 + r 89 -14.4 -3.84712 | opp_overlap 4360029 4360028 4360033 ATCGCAAATATGAAA CGGCTTCAACGATGGT TGA AACATCATTGAAGCCG TTTCGTCTCGACTTG TERM 3550 4360067 - 4360033 - R 100 -16.6 -4.00934 | opp_overlap 4360033, overlap 4360029 4360028 ATCGCAAATATGAAA CGGCTTCAACGATGGT TGA AACATCATTGAAGCCG TTTCGTCTCGACTTG RPD_3921 4362142 - 4360091 - | elongation factor G TERM 3551 4361490 - 4361518 + g 75 -11.7 -3.67622 | overlap 4361486 CCGTCGTCGTGATCA GCGAGCTTCTCGA GCA TCGAGAAGCGGGC TTCCTTTTCGCGATC RPD_3922 4362173 - 4362913 + | hypothetical protein RPD_3923 4363487 - 4363017 - | hypothetical protein TERM 3552 4363709 - 4363679 - R 100 -17.6 -4.08064 | opp_overlap 4363684, overlap 4363684 AAGCCTGCCCCAAAA CAAAAGGGCCCGCG ATG CGCGAGCCCTTCCG TCACGAGAGTGCGCC TERM 3553 4363704 - 4363684 - R 100 -16.1 -5.07652 | opp_overlap 4363684, overlap 4363679 TGCCCCAAAACAAAA GGGCCCGCG ATG CGCGAGCCC TTCCGTCACGAGAGT TERM 3554 4363684 - 4363704 + r 75 -13.9 -3.05463 | opp_overlap 4363684 4363679 TGCCCCAAAACAAAA GGGCCCGCG ATG CGCGAGCCC TTCCGTCACGAGAGT RPD_3924 4364259 - 4363732 - | hypothetical protein TERM 3555 4364336 - 4364306 - R 71 -9 -3.79906 | CGACGGCGACAAGAA GGAAGCGTCTTGTC CAA AAAAAGGCGCTTCC ACGACAGGGGAATAA RPD_3925 4365599 - 4364397 - | aspartate aminotransferase RPD_3926 4365920 - 4365672 - | hypothetical protein TERM 3556 4366379 - 4366404 + G 76 -15.5 -2.8598 | gap 1, opp_overlap 4366378 4366377 4366375, overlap 4366376 TCTTCGAACAACACG CGCTCGAGCCGA ATA TCGGCTCG-GCG TACTTCTGGCTGTGT RPD_3927 4366045 - 4366731 + | glutathione S-transferase-like TERM 3557 4366742 - 4366757 + F 78 -3.2 -5.00884 | gap 1, overlap 4366736 CATGACGCGCCGTTT CGGACGG ATT TCG-CCG TTTTTTCGACAAGAT RPD_3928 4367125 - 4368288 + | glucose sorbosone dehydrogenase RPD_3929 4368760 - 4368401 - | hypothetical protein TERM 3558 4368832 - 4368853 + H 72 -7.2 -4.13767 | GGCGGCGATGCTGAC GCCCAGCG CTGAGA CGCTGGAC TTTTGCGATGCACCA TERM 3559 4368992 - 4369036 + H 83 -11.9 -4.07687 | TCGCCGATCAGCGTC CCCCGCGGTCCCCGTCAGTCG CCG CGTCTGACAGGGGCCGCACCG TTTTGAGCGGACGAT RPD_3930 4369058 - 4369909 + | phospholipid/glycerol acyltransferase TERM 3560 4369949 - 4369981 + F 84 -14.1 -3.72576 | gap 1, opp_overlap 4369969 ACCGCCTTGCCGCCG CGCGGTGCGCGCGC CAGAAT GCGCGCTC-CCGCG TTTCGTACAGGACCC RPD_3931 4370000 - 4370941 + | aldo/keto reductase RPD_3932 4371125 - 4372018 + | hypothetical protein TERM 3561 4372048 - 4372058 + F 73 -8.2 -4.07568 | opp_overlap 4372048, overlap 4372047 TTGCCCTCGATCACA GCGC TGC GCGC TTTTGCCACGCGACG RPD_3933 4372235 - 4373050 + | HAD family hydrolase RPD_3934 4373401 - 4374600 + | transposase, IS204/IS1001/IS1096/IS1165 RPD_3935 4374600 - 4374956 + | putative transposase TERM 3562 4375352 - 4375325 - g 82 -6.2 -4.75309 | gap 1, opp_overlap 4375328 TCAAACGCAACAAAA CAGA-CGCCGCCG ATG CCGAGGCGATCTG TGAGGCGGTGACGCG RPD_3936 4375060 - 4376091 + | transposase IS116/IS110/IS902 TERM 3563 4376400 - 4376388 - g 72 -4.7 -4.45068 | ACGCCGAATAACAAA GTGCC ATC GGCTC GGACCATCGCCCGTA RPD_3937 4376289 - 4376663 + | hypothetical protein RPD_3938 4378344 - 4377190 - | hypothetical protein RPD_3939 4379585 - 4378341 - | MobA/MobL protein TERM 3564 4379547 - 4379519 - G 73 -3.8 -4.58395 | gap 1, opp_overlap 4379529 TGTAGCGCGCAAAAA GACTTGCCGAGCC TTTT GGGTCGGTA-GTC CGGCCAATGAAGCTG RPD_3940 4379671 - 4380315 + | Type IV secretory pathway VirD4 components-like RPD_3941 4380650 - 4382389 + | hypothetical protein TERM 3565 4383845 - 4383870 + G 100 -17.5 -4.57569 | CGATGCACTTGACGC CGCCCGCGGCG GTTC CGCCGAGGGCG TTTTTGCACAGCTCA TERM 3566 4387207 - 4387223 + G 78 -6.5 -4.60255 | TTGGGTTGAAGAGCC CTGACGC CAT GCATCAG TTTTTGAAAGATTAT RPD_3942 4382628 - 4387577 + | hypothetical protein TERM 3567 4388568 - 4388546 - g 84 -6.9 -4.8083 | CAAGAGCATCAAAAA GAGTCGCGA ATGCG TCGCGGCCC TGAGCAAAACGATAA RPD_3943 4387641 - 4388867 + | hypothetical protein RPD_3944 4388864 - 4389859 + | hypothetical protein RPD_3945 4391720 - 4389999 - | hypothetical protein TERM 3568 4391346 - 4391333 - G 70 -2.3 -4.63218 | CCTCGCGGAAGAAAA TGCGG TCCT CCGAA TGAGGAAGAATCCTG RPD_3948 4393235 - 4392966 - | conjugal transfer TraD RPD_3949 4393629 - 4393237 - | hypothetical protein TERM 3569 4395361 - 4395345 - g 73 -6.5 -4.30576 | overlap 4395347 TGCCTATGACGAAAA CGGCATG GTG CATGCTG CGGCGTCCCGCGAGC RPD_3950 4393639 - 4396758 + | MobA/MobL protein TERM 3570 4397607 - 4397567 - T 83 -13.3 -3.83756 | opp_overlap 4397578, overlap 4397568 AAATGAGAATCCAAA GCCGCAGGAAAGCCGCGAC ATC ACCACGGCTTTCCTGCAAA ATCGAATACTTGTCC TERM 3571 4397606 - 4397568 - T 83 -16.8 -2.89169 | opp_overlap 4397578, overlap 4397567 AATGAGAATCCAAAG CCGCAGGAAAGCCGCGAC ATC ACCACGGCTTTCCTGCAA AATCGAATACTTGTC TERM 3572 4397750 - 4397736 - T 77 -4.2 -4.83269 | AGATCATAGTAAAAA CGCG CATTGGT CGCG TAAATCAGTCGAAAT RPD_3951 4398546 - 4397755 - | hypothetical protein TERM 3573 4398083 - 4398102 + g 70 -3.5 -4.45485 | opp_overlap 4398083 TCACTGCCTGCCAAA GACGGCA CATCGA TACCGTC TTTTATAAATATGAT RPD_3952 4400899 - 4398770 - | hypothetical protein TERM 3574 4400279 - 4400269 - G 72 -6.8 -4.25104 | TCTCGGTTACGAAAA CGAG AAG CTCG CCCGGCTCGCGTGGC RPD_3953 4402170 - 4400896 - | metallophosphoesterase RPD_3954 4402532 - 4402771 + | hypothetical protein RPD_3955 4402877 - 4404100 + | endodeoxyribonuclease RusA RPD_3956 4405396 - 4404206 - | hypothetical protein TERM 3575 4405310 - 4405363 + g 100 -22.4 -2.94099 | opp_overlap 4405295 TCCGCCCACGGTTCG GCGCCCGCCGATCGCGCCGGGCAG AATGTG CTCCTCGGAGTCATCGGCGGGCGC TATGTCCTGGCCACA RPD_3957 4405649 - 4405407 - | hypothetical protein RPD_3958 4405733 - 4406221 + | hypothetical protein RPD_3959 4406360 - 4407988 + | recombinase RPD_3960 4408466 - 4408125 - | hypothetical protein RPD_3961 4409146 - 4408508 - | phosphatidylethanolamine N-methyltransferase TERM 3576 4408554 - 4408539 - G 77 -5.4 -4.68593 | gap 1, overlap 4408541 CGGATCAGCGAAAAA TGCC-CC ATC GGCGGCA TCGGCCGTCGCTCGG trmU 4410373 - 4409165 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 3577 4409336 - 4409299 - G 77 -7.5 -4.36914 | gap 1 CCGCGTCGTAGAAAA CACAGGCCTGGCCGGGCG AAA CGCCCT-CCTCGCCCGCG ACCAGCTCGACCTCG TERM 3578 4409573 - 4409563 - G 72 -8.2 -4.08706 | overlap 4409564 GCCGCAGCACATAAA GCGG CGC CCGC GAGGCGATGCCGAGA TERM 3579 4410500 - 4410511 + H 70 -7.2 -4.07568 | opp_overlap 4410500 TCAGGGGCGCAATGA GCCG TCTC CGGC TTTTGCGGGAGGGCC TERM 3580 4410587 - 4410559 - H 81 -12.3 -3.85698 | CGGTGCGGGCAGAAA CGGCGCGGCAAGA CTC CCATGCCGGGCCG CAGACTTCGACCCAA RPD_3963 4410684 - 4412264 + | flagellar hook-length control protein RPD_3964 4412277 - 4413005 + | flagellar hook capping protein RPD_3965 4413836 - 4413018 - | lytic murein transglycosylase TERM 3581 4413429 - 4413411 - G 70 -11 -3.62096 | CGCGAGCACGCGAAA CACCGGCA GCT TGCCGATG TCGCCCTTGCCGAAA TERM 3582 4413784 - 4413745 - G 81 -15 -3.55801 | gap 1, opp_overlap 4413764, overlap 4413735 ATGAAGGTGTTGAAA TCACCGCCGCAAC-GCGCA GCC TGCGCAGGCGCGGCAGCGA GCAGCGCGCCGCCGA RPD_3966 4414075 - 4414434 + | hypothetical protein TERM 3583 4414463 - 4414485 + T 100 -19.2 -4.13654 | opp_overlap 4414439 4414463 CCTTTCACATCAGAA CCGCGCCGAT CGG ATCGGCGCGG TTTGTCGTTTGGCGG TERM 3584 4414485 - 4414463 - T 95 -19.2 -3.46602 | opp_overlap 4414463, overlap 4414439 CCTTTCACATCAGAA CCGCGCCGAT CGG ATCGGCGCGG TTTGTCGTTTGGCGG RPD_3967 4415121 - 4414558 - | peptidase C56, PfpI TERM 3585 4415511 - 4415526 + r 74 -4.6 -4.55697 | overlap 4415514 ATGTCGTGCTCTCCC CGGCGA ACGG TCTCCG TTTGTTTGTCGCCGT TERM 3586 4415514 - 4415530 + r 71 -8.7 -3.87815 | overlap 4415511 TCGTGCTCTCCCCGG CGAACGG TCT CCGTTTG TTTGTCGCCGTCCCC RPD_3968 4416202 - 4415876 - | cupin 2, barrel RPD_3969 4416453 - 4417580 + | 3-oxoacyl-(acyl carrier protein) synthase III RPD_3970 4417706 - 4417924 + | transcriptional regulator RPD_3971 4418005 - 4418997 + | filamentation induced by cAMP protein Fic TERM 3587 4419329 - 4419308 - T 100 -7.2 -5.33405 | CCGAGCAAACAAAAA TGGCGGGG GGTGAG CCCGGCCA TTGCAGCAACACTGT TERM 3588 4419874 - 4419893 + T 83 -15 -3.53444 | opp_overlap 4419874 CCTCGGATATGAAAA TGCCCGGC GCGG GCCGGGCA TTTGGAAGACGATGA TERM 3589 4419893 - 4419874 - T 100 -15 -4.34402 | opp_overlap 4419874 CCTCGGATATGAAAA TGCCCGGC GCGG GCCGGGCA TTTGGAAGACGATGA RPD_3972 4422087 - 4419952 - | RNA polymerase sigma factor RpoD TERM 3590 4421130 - 4421149 + g 70 -8.6 -3.91357 | gap 1, overlap 4421136 GGTTGGCGATGTCCT GCTCCTGCA GCT TGC-GGAGC TTCTTGTAGTTGTCG TERM 3591 4421360 - 4421409 + g 75 -11.4 -3.63073 | gap 3 GCCGACGGCGGCGCG GCCGGCGGCGCGAGATGCGCGGGCG CTC CGCCCTCGCCT-TCG-GCCGA-GGC TTCTTCGCCGGTCTC TERM 3592 4422191 - 4422168 - R 77 -13.1 -3.59262 | GGTGAGACGCGCAAA GGGCGGCGC CAGCCT GCGCCACCC GACACGATCCCGCTT dnaG 4424403 - 4422346 - | DNA primase TERM 3593 4423050 - 4423004 - G 83 -12.8 -4.07568 | overlap 4423005 4423037 CCCCCCTGTGGAAAA CCCCCGCGCGGCGGAAATCCGC GCC GCGAATCACCGCCGCGCCCAGC CCCGCCGCGGAAGCC TERM 3594 4423049 - 4423005 - G 79 -16.3 -3.04398 | overlap 4423004 4423037 CCCCCTGTGGAAAAC CCCCGCGCGGCGGAAATCCGC GCC GCGAATCACCGCCGCGCCCAG CCCCGCCGCGGAAGC TERM 3595 4423417 - 4423435 + g 73 -13.1 -3.28712 | opp_overlap 4423429 CGGCAGCGCCAGATC GGCGGCG CGAAA CGCCGCC TTCTGGCCGGCGCGG RPD_3974 4424598 - 4424945 + | hypothetical protein RPD_3975 4424965 - 4425204 + | hypothetical protein RPD_3976 4425502 - 4425744 + | hypothetical protein RPD_3977 4426234 - 4425827 - | hypothetical protein RPD_3978 4427165 - 4426251 - | transglutaminase-like RPD_3979 4427175 - 4428047 + | N-formylglutamate amidohydrolase TERM 3596 4428139 - 4428173 + T 81 -16.5 -2.72031 | gap 1, overlap 4428108 4428136 4428134 4428131 CGGGCAACCTCGAGA TTCCGGGTTCGCTCGC TGTC GCGAGCGC-CCCGGAA TGATGTCGTTCTACT RPD_3980 4428801 - 4428184 - | lysine exporter protein LysE/YggA TERM 3597 4428490 - 4428472 - G 75 -11.6 -3.71848 | opp_overlap 4428477, overlap 4428473 CCCCTGCAGGAAGAA TCCGCCGC GCG GCGGCGGC GGCGGCGCGTCGGTT TERM 3598 4428489 - 4428473 - G 73 -15.1 -2.82895 | opp_overlap 4428477, overlap 4428472 CCCTGCAGGAAGAAT CCGCCGC GCG GCGGCGG CGGCGGCGCGTCGGT RPD_3981 4428912 - 4429235 + | helix-turn-helix, type 11 RPD_3982 4429228 - 4429689 + | hypothetical protein RPD_3983 4430577 - 4429729 - | hypothetical protein TERM 3599 4430807 - 4430775 - R 80 -6.1 -4.7261 | overlap 4430776 AGTGACGAAAACAAA CGCGGATGTCGTGCA CCA TGCGCGACGCGCGCA CCTCTCGCGCTTGCG RPD_3984 4432598 - 4430991 - | AMP-dependent synthetase and ligase TERM 3600 4431966 - 4431998 + g 70 -10.4 -3.66356 | GACATTCGGCAGATG GCCGAGCAGCACGC GATGG GCGTGCAGCGCGCC TTTCGGGTTACCGGT RPD_3985 4433140 - 4432685 - | hypothetical protein RPD_3986 4433598 - 4434791 + | carbamoyl phosphate synthase small subunit TERM 3601 4435204 - 4435164 - g 70 -9.8 -3.66178 | gap 3 GCGCCGAATTCCAAA GCC--CACCGGCCCGA-CG TCAAAC CGATCGGGCCGGCGCTGGC GGAACTGCTCAATCC TERM 3602 4435468 - 4435445 - g 77 -16 -3.05463 | AGTGCCCGCACCCAA CCCTCCCCCG CAAG CGGGAGAGGG CTCCGCGCGGCAGGC TERM 3603 4435609 - 4435585 - g 71 -14.3 -2.90075 | overlap 4435602 CCGCGGGCAATGACA CGCGAGGCTTC GAC GAAGCCCCGCA AGCCACCTACGGCAC RPD_3987 4435092 - 4438235 + | excinuclease ABC subunit B TERM 3604 4438281 - 4438254 - f 91 -18.6 -3.03243 | ACCCACTCGCCAAGA TCGACTGTAGCG CTTA CGCTACAGTCGA GGCGACCGATGCCGA RPD_3988 4438431 - 4438586 + | hypothetical protein RPD_3989 4438589 - 4438876 + | hypothetical protein RPD_3990 4439293 - 4438928 - | hypothetical protein TERM 3605 4439618 - 4439586 - R 93 -18.5 -3.28924 | opp_overlap 4439592, overlap 4439592 GAGGTTCGGCCACAA CAAAAAGGGCGGCGC ATA GCACCGCCCTCTTCG ATCGCGGACGCTTGC TERM 3606 4439592 - 4439612 + r 75 -13.9 -3.08679 | opp_overlap 4439586 4439592 CGGCCACAACAAAAA GGGCGGCGC ATA GCACCGCCC TCTTCGATCGCGGAC TERM 3607 4439612 - 4439592 - R 100 -16.1 -5.18726 | opp_overlap 4439592, overlap 4439586 CGGCCACAACAAAAA GGGCGGCGC ATA GCACCGCCC TCTTCGATCGCGGAC RPD_3991 4440905 - 4439652 - | acetyl-CoA acetyltransferase RPD_3992 4441074 - 4441448 + | hypothetical protein RPD_3993 4441924 - 4442355 + | hypothetical protein RPD_3994 4442537 - 4442986 + | hypothetical protein TERM 3608 4443026 - 4443049 + T 100 -13.2 -5.80364 | opp_overlap 4443026 CCGCAAGACATCGAA TGCAGCCGTC GCGA GATGGCTGCA TTTTTTTGTTGCGAT RPD_3995 4443406 - 4443254 - | hypothetical protein RPD_3996 4444034 - 4443552 - | MaoC-like dehydratase RPD_3997 4444624 - 4444157 - | MaoC-like dehydratase RPD_3998 4444707 - 4445000 + | hypothetical protein RPD_3999 4446294 - 4445197 - | translation-associated GTPase TERM 3609 4445547 - 4445528 - G 72 -5.7 -4.37092 | gap 1, opp_overlap 4445515 4445542, overlap 4445532 AGGGTGTCGAGAAAA TCGACGCG TTCCT CGCG-CGA CAGCGTCGCGATCTC RPD_4000 4447047 - 4446424 - | peptidyl-tRNA hydrolase TERM 3610 4446960 - 4446925 - G 90 -17.7 -3.53012 | gap 1, opp_overlap 4446925, overlap 4446926 4446929 GGTCTCGCCCTGAAA GCGACGGCGCCATGGC GAGAA GCCATGACGCCGT-GC GATCTCGTCGATGAC TERM 3611 4446961 - 4446926 - G 85 -17.7 -2.71712 | gap 1, opp_overlap 4446925, overlap 4446925 4446929 GTCTCGCCCTGAAAG CG-ACGGCGCCATGGC GAGAA GCCATGACGCCGTGCG ATCTCGTCGATGACC TERM 3612 4446957 - 4446929 - G 85 -18.2 -2.64155 | opp_overlap 4446925, overlap 4446925 4446926 TCGCCCTGAAAGCGA CGGCGCCATGGC GAGAA GCCATGACGCCG TGCGATCTCGTCGAT RPD_4001 4447770 - 4447066 - | 50S ribosomal protein L25/general stress protein Ctc TERM 3613 4447138 - 4447189 + g 74 -12.6 -3.54602 | overlap 4447142 4447146 4447151 GGCGGCGCCAGCCTT GGCCGCAGGAGCCGCAGCGGCGGC AGGA GCCGCAGCGCCGGCCGCAGCCGCC TTCTGCTCTTCATTG TERM 3614 4447816 - 4447802 - R 86 -12.8 -3.99805 | TTTCAAAAAGTTAAA GGCCGC AAC GCGGCC CATGGGAACGCCGCA TERM 3615 4447980 - 4447964 - R 79 -10.9 -3.92373 | CAGCGCAGCGAGAAA TTCACCG GGA CGGTGAA GCCGAGCGAGGACTG RPD_4002 4448826 - 4447948 - | TonB-like RPD_4003 4449260 - 4448823 - | biopolymer transport protein ExbD/TolR RPD_4004 4450067 - 4449264 - | MotA/TolQ/ExbB proton channel TERM 3616 4450108 - 4450090 - H 86 -11.6 -4.18494 | CAGCGGCAGGGAAAA GGGCGCGG CGG CCGCGACC TATCGCATGGATCGC TERM 3617 4450185 - 4450199 + H 73 -3.5 -4.68908 | opp_overlap 4450186, overlap 4450186 ACGCCCATCGCATAA TCGCA CGGAT TGCGG TTTGTTTTGCCTCAA RPD_4005 4450438 - 4451286 + | enoyl-CoA hydratase TERM 3618 4452235 - 4452192 - g 70 -13.6 -3.05384 | GCGGGCCGCACTGAA GGCCGACGCCGACGCCGCCG AACG CGGCCGCGCCGCCTCCGGCG CCAAGGCCAAGATCG RPD_4006 4451290 - 4452432 + | acyl-CoA dehydrogenase-like RPD_4007 4452448 - 4453644 + | acyl-CoA dehydrogenase-like TERM 3619 4453823 - 4453768 - T 73 -13.3 -3.14132 | gap 3, overlap 4453793 GCGGCCCCGGATCAA CCGGGGTCCCGGGTCTGCGGAGCAACAC TGC GCGCTGCACCGC-G-CCCGGGA-CACGA AGCAACTCACTGTGG RPD_4008 4455178 - 4453844 - | phenylacetate--CoA ligase RPD_4009 4455756 - 4455199 - | pyruvate ferredoxin/flavodoxin oxidoreductase RPD_4010 4456601 - 4455771 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta RPD_4011 4457761 - 4456601 - | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha TERM 3620 4457609 - 4457585 - G 70 -11.4 -3.35813 | TTCCATCTGAATGAA CACGCCGCCG GCACG CGGCAGCATG GTCGACAGCCGCTCG RPD_4012 4458705 - 4457758 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 3621 4458067 - 4458094 + g 79 -7.6 -4.56597 | overlap 4458070 GTTGCGGCCGAGTTC GAACGCCGCGGT GTTC ACCGCGATGGTC TTTTTCGGCACGAAG RPD_4013 4460525 - 4458702 - | thiamine pyrophosphate enzyme-like TPP-binding TERM 3622 4459533 - 4459511 - G 70 -11.2 -3.61398 | overlap 4459512 4459528 CCGGCGCGGGAAGAA TGCCGGCCTG CAC CAGACCGGCG CGCACCACCTCCGGC TERM 3623 4459532 - 4459512 - G 72 -14.7 -2.76696 | overlap 4459511 4459528 CGGCGCGGGAAGAAT GCCGGCCTG CAC CAGACCGGC GCGCACCACCTCCGG RPD_4014 4460789 - 4461055 + | hypothetical protein TERM 3624 4461404 - 4461441 + G 78 -9.8 -4.10657 | gap 1, opp_overlap 4461403, overlap 4461405 4461407 GGGCGTCCACCAGAT GCG-GATCGCGCTGCGC CGAAC GCGCGCCGCGATCTCGA TTTTCGCCGATCTGG TERM 3625 4461405 - 4461440 + G 70 -13.3 -3.06073 | gap 1, opp_overlap 4461403, overlap 4461404 4461407 GGCGTCCACCAGATG CG-GATCGCGCTGCGC CGAAC GCGCGCCGCGATCTCG ATTTTCGCCGATCTG TERM 3626 4461407 - 4461437 + G 72 -14.7 -2.74784 | opp_overlap 4461403, overlap 4461405 4461404 CGTCCACCAGATGCG GATCGCGCTGCGC CGAAC GCGCGCCGCGATC TCGATTTTCGCCGAT RPD_4015 4461171 - 4462154 + | CHAD RPD_4016 4462147 - 4462971 + | hypothetical protein RPD_4017 4465098 - 4462993 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 3627 4463100 - 4463076 - G 75 -14.2 -3.34398 | overlap 4463074 CGCGCTCGTGAAACA GCGCCGCGGG CGGAT CGCGCGGCGC GATCTCGGCGAAGGC TERM 3628 4465099 - 4465146 + r 73 -10.7 -3.65351 | overlap 4465101 GAGCATACCGGCCAC GACCGCGATCACCAGGGCTG-CG AGAG CGTCGGCTCTGGTGAT-GTGGTG TTTCAATGCGGCTCG TERM 3629 4465101 - 4465144 + r 76 -13.3 -3.40775 | overlap 4465099 GCATACCGGCCACGA CCGCGATCACCAGGGCTG-CG AGAG CGTCGGCTCTGGTGAT-GTGG TGTTTCAATGCGGCT RPD_4018 4465842 - 4465177 - | hypothetical protein TERM 3630 4465328 - 4465340 + g 79 -4.8 -4.77165 | ATATCGTAGAACCGC CCCT TGATC AGGG TTTTCTTGTCGACCG RPD_4019 4467114 - 4466095 - | hypothetical protein RPD_4020 4468259 - 4467156 - | cyclic nucleotide-binding RPD_4021 4468632 - 4469255 + | hypothetical protein TERM 3631 4469292 - 4469325 + T 95 -18.3 -3.53224 | opp_overlap 4469281 4469298, overlap 4469298 AAAAGAGCCCGTTTG TGAAAAGAGCCCGGC GCGC GCCGGGCTCTTTTTG TTTGGCCCGGGCGTC TERM 3632 4469298 - 4469319 + T 100 -17.3 -5.27335 | opp_overlap 4469281 4469298, overlap 4469292 GCCCGTTTGTGAAAA GAGCCCGGC GCGC GCCGGGCTC TTTTTGTTTGGCCCG TERM 3633 4469319 - 4469298 - T 100 -17.3 -4.07568 | opp_overlap 4469298 4469292, overlap 4469281 GCCCGTTTGTGAAAA GAGCCCGGC GCGC GCCGGGCTC TTTTTGTTTGGCCCG TERM 3634 4469422 - 4469465 + T 91 -18 -3.14132 | TCCTTGTTCGGGCCC TCGGCGCTTCGCCGGCCCAC GGCT GCGGGACGGCGAAGCTCCGC TTGCTGGGGCGCGCG RPD_4022 4471118 - 4469508 - | extracellular solute-binding protein TERM 3635 4469836 - 4469852 + g 79 -10.8 -3.91897 | AAGAACATGTTCCAG CCGCCG TCCTT CGGCGG TTTCTGGCTGGCGCG RPD_4023 4471424 - 4472554 + | carboxypeptidase RPD_4024 4472731 - 4473672 + | binding-protein-dependent transport systems inner membrane component RPD_4025 4473684 - 4474574 + | binding-protein-dependent transport systems inner membrane component RPD_4026 4474571 - 4476244 + | ABC transporter related RPD_4027 4476346 - 4476837 + | peroxiredoxin-like protein TERM 3636 4476931 - 4476890 - T 100 -20.2 -3.72576 | overlap 4476842 GGCGCTCGCACTAAA CGCCGACGTCATCGCCCG ATTTCG CGGGTGATGACGTCGGAG GTGGCCGAGATTCAG RPD_4028 4477429 - 4476977 - | ribonuclease H RPD_4029 4478415 - 4477435 - | homoserine kinase TERM 3637 4477860 - 4477834 - G 74 -12.2 -3.54129 | opp_overlap 4477831, overlap 4477836 4477839 CACATTGTCCGGAAA CAGATCGGCGTG GAT CACGCCGGTCGG CAATTGATCGGGCCA TERM 3638 4477858 - 4477836 - G 73 -13.4 -3.34715 | opp_overlap 4477831, overlap 4477834 4477839 CATTGTCCGGAAACA GATCGGCGTG GAT CACGCCGGTC GGCAATTGATCGGGC RPD_4030 4479467 - 4478502 - | hydroxymethylbutenyl pyrophosphate reductase TERM 3639 4479303 - 4479287 - G 80 -9.3 -4.25104 | opp_overlap 4479285, overlap 4479288 GTTCCTCGACGAAAA TCGCGCC CTT GGCGCGG AGGTTGTCGACCACG TERM 3640 4480297 - 4480254 - g 77 -3 -4.8622 | gap 1, overlap 4480255 4480256 4480258 4480271 GCCGCCAAGGAAAAA CCGACCGACCAGCAATATGGC GGC GCCACGCTGCTG-CCGGCCTC CGAGACCACCCGCAA RPD_4031 4479726 - 4480433 + | hypothetical protein TERM 3641 4480451 - 4480469 + T 73 -8.8 -4.07885 | CCGCATTGCGCGGAC CGCTGCTG AGC TAGCGGCG TTTTCGAGCGAAGTG TERM 3642 4480565 - 4480525 - T 100 -23.7 -3.81951 | opp_overlap 4480528 4480530 CGTCAGATCATCAAA TTAGAGCTTTGGTTCCGAT GCA ATCAGAACCAAAGCTCTAA TTCCGCGAGCCCCGG TERM 3643 4480528 - 4480562 + T 87 -18.8 -2.70932 | opp_overlap 4480525, overlap 4480530 CAGATCATCAAATTA GAGCTTTGGTTCCGAT GCA ATCAGAACCAAAGCTC TAATTCCGCGAGCCC TERM 3644 4480530 - 4480560 + T 79 -15.6 -2.90075 | opp_overlap 4480525, overlap 4480528 GATCATCAAATTAGA GCTTTGGTTCCGAT GCA ATCAGAACCAAAGC TCTAATTCCGCGAGC mutL 4482395 - 4480602 - | DNA mismatch repair protein TERM 3645 4481966 - 4481952 - G 70 -4.2 -4.56597 | opp_overlap 4481956, overlap 4481954 4481955 CGGCGTGGCGAAAAA CAGGTC GGC GACCTC GACGCGCGTGCCCTG RPD_4033 4483095 - 4482676 - | hypothetical protein RPD_4034 4484621 - 4483233 - | peptidase M16-like RPD_4035 4486003 - 4484618 - | peptidase M16-like RPD_4036 4486883 - 4486158 - | hypothetical protein TERM 3646 4486484 - 4486509 + g 75 -13.3 -3.36273 | gap 1, opp_overlap 4486478 CCGAAGGCATCAGCG GCCGG-GCCGAC TCG GTCGGCGTCGGC TTGCTCTTACGGGCG RPD_4037 4487470 - 4486973 - | lipoprotein signal peptidase ileS 4490632 - 4487627 - | isoleucyl-tRNA synthetase TERM 3647 4489489 - 4489514 + g 73 -12.6 -3.35996 | gap 1, opp_overlap 4489489 GGATCGCCGAGGAGA TGC-CGCGCGC CTCGA GCGCGCGCGCA TTGTGCATCCAGATG RPD_4039 4491386 - 4490811 - | maltose O-acetyltransferase RPD_4040 4492351 - 4491383 - | riboflavin biosynthesis protein RibF RPD_4041 4493191 - 4492499 - | ribonuclease T2 TERM 3648 4493173 - 4493155 - G 100 -12.4 -4.62471 | CGCAAGCGGCAAAAA CGGCGATC ATC GACCGCCG ACTCGAGATGAAATC RPD_4042 4493763 - 4493302 - | hypothetical protein RPD_4043 4493928 - 4494218 + | hypothetical protein RPD_4044 4494232 - 4494768 + | hypothetical protein RPD_4045 4494931 - 4495305 + | hypothetical protein RPD_4046 4495439 - 4497808 + | TonB-dependent receptor TERM 3649 4497933 - 4497887 - T 76 -13.7 -3.17229 | gap 2, overlap 4497885 ATGCTACGATCAACA GCTCGGGATTCCGGGTTCGCCGC TCC GCGGCGC-CCCGGAATGACG-GC GTAAGGTTAGCCCGG RPD_4047 4498486 - 4497968 - | GCN5-related N-acetyltransferase TERM 3650 4498540 - 4498502 - R 84 -16.6 -3.04144 | opp_overlap 4498508 4498510, overlap 4498505 GGCGGACGCGCAATA GCACCGCAGCCGGGCGCG GTC CACGCCCGGCTGTGGTTA ACGGCTCTCAGGAAC TERM 3651 4498537 - 4498505 - R 100 -22.7 -2.74523 | opp_overlap 4498508 4498510, overlap 4498502 GGACGCGCAATAGCA CCGCAGCCGGGCGCG GTC CACGCCCGGCTGTGG TTAACGGCTCTCAGG TERM 3652 4498508 - 4498534 + r 87 -19.4 -2.72049 | opp_overlap 4498505 4498502, overlap 4498510 CGCGCAATAGCACCG CAGCCGGGCGCG GTC CACGCCCGGCTG TGGTTAACGGCTCTC TERM 3653 4498510 - 4498532 + r 83 -16.2 -2.90392 | opp_overlap 4498505 4498502, overlap 4498508 CGCAATAGCACCGCA GCCGGGCGCG GTC CACGCCCGGC TGTGGTTAACGGCTC RPD_4048 4500273 - 4498564 - | MscS mechanosensitive ion channel TERM 3654 4499533 - 4499523 - G 86 -8.2 -4.82901 | overlap 4499524 4499525 TGGCCGTCAGAAAAA GCCG GAT CGGC AACGCCGAGGCGTTC RPD_4049 4500930 - 4500421 - | NUDIX hydrolase TERM 3655 4501405 - 4501455 + G 71 -13.9 -2.87132 | opp_overlap 4501449 CGGCGATGGCTCGAC GGCGTCG-GGCCGCCGGAGCGCGTC AGC GTCGTGC-CCGGCAATCACGACGCC TATGTCGCCGCCACC RPD_4050 4501147 - 4502025 + | metallophosphoesterase RPD_4051 4502595 - 4502035 - | hypothetical protein TERM 3656 4502802 - 4502755 - R 100 -19 -4.07885 | opp_overlap 4502758, overlap 4502756 4502758 GATGCGCGCCCAAAA CGACGATGGCGGCCCCGCCGGG TTTC CCCGGTGGGACCGCCAAAGTCC TTGGACGTCTTCTAT TERM 3657 4502801 - 4502756 - R 100 -22.5 -3.04517 | opp_overlap 4502758, overlap 4502755 4502758 ATGCGCGCCCAAAAC GACGATGGCGGCCCCGCCGGG TTTC CCCGGTGGGACCGCCAAAGTC CTTGGACGTCTTCTA TERM 3658 4502758 - 4502799 + r 87 -19.3 -2.73468 | opp_overlap 4502756 4502755 4502758 GCGCGCCCAAAACGA CGATGGCGGCCCCGCCGGG TTTC CCCGGTGGGACCGCCAAAG TCCTTGGACGTCTTC TERM 3659 4502799 - 4502758 - R 91 -19.3 -3.08032 | opp_overlap 4502758, overlap 4502756 4502755 GCGCGCCCAAAACGA CGATGGCGGCCCCGCCGGG TTTC CCCGGTGGGACCGCCAAAG TCCTTGGACGTCTTC RPD_4052 4503032 - 4502823 - | hypothetical protein RPD_4053 4504693 - 4503056 - | isocitrate lyase RPD_4054 4504908 - 4506350 + | hypothetical protein TERM 3660 4506597 - 4506577 - f 74 -14 -2.89564 | opp_overlap 4506592 TTCTGATTTGATAGA TCGCCGGG TCAAG CCCGGCGA TGACGTTCGTGGAGA RPD_4055 4506597 - 4507985 + | lytic murein transglycosylase TERM 3661 4508453 - 4508420 - g 83 -4.5 -4.99312 | gap 1, overlap 4508412 4508421 4508422 AAGAGAACAAGAAAA TCCTGATCGTCGAGCC CGC GG-TCGCCGACCAGAT CACCGGCGAGAAGTG RPD_4056 4508065 - 4509249 + | extracellular ligand-binding receptor TERM 3662 4509352 - 4509319 - f 84 -17.5 -2.78463 | gap 1, opp_overlap 4509283 4509312 ATTGTGGCGACGAGA TTCCGGGTTCGCGAGC TTC GCTCGCGC-CCCGGAA TGACGAACTCTAATG RPD_4057 4509393 - 4510157 + | ABC transporter related RPD_4058 4510303 - 4511025 + | ABC transporter related RPD_4059 4511022 - 4512032 + | inner-membrane translocator TERM 3663 4512177 - 4512204 + G 73 -14.2 -3.1739 | overlap 4512198 CAAGCCGCTCAACGT CGCCGCCAAGAT CTGC ATCTTCGCGGCG TTGGTCGCGTCCTAT RPD_4060 4512058 - 4513125 + | inner-membrane translocator RPD_4061 4513336 - 4513641 + | hypothetical protein RPD_4062 4513704 - 4515092 + | NADH:flavin oxidoreductase/NADH oxidase TERM 3664 4515272 - 4515245 - T 90 -20 -2.71731 | opp_overlap 4515249, overlap 4515230 4515249 GCCACTCCTGAATCA GAAAGGCCGGGA TCGC TCCCGGCCTTTC GCGTTGTTGCTCGGC TERM 3665 4515249 - 4515268 + T 88 -15 -3.72453 | opp_overlap 4515230 4515245 4515249 CTCCTGAATCAGAAA GGCCGGGA TCGC TCCCGGCC TTTCGCGTTGTTGCT TERM 3666 4515268 - 4515249 - T 93 -15 -4.05446 | opp_overlap 4515249, overlap 4515230 4515245 CTCCTGAATCAGAAA GGCCGGGA TCGC TCCCGGCC TTTCGCGTTGTTGCT RPD_4063 4517094 - 4515295 - | extracellular solute-binding protein RPD_4064 4517550 - 4517164 - | hypothetical protein TERM 3667 4517210 - 4517232 + g 73 -13.4 -3.25356 | opp_overlap 4517210 AGCAGCGACAGCACA GTGGCGAGCC ACA GGCTCGACAC TTCAATTCCTTCTCC RPD_4065 4518364 - 4517558 - | binding-protein-dependent transport systems inner membrane component TERM 3668 4518383 - 4518403 + r 73 -12.5 -3.21416 | overlap 4518384 GCGCTCCCGGGGGTC TGCTGGCGC TCG GCGCCGGCG TTGGTCATCACCGTG TERM 3669 4518384 - 4518402 + r 71 -13.8 -2.52635 | overlap 4518383 CGCTCCCGGGGGTCT GCTGGCGC TCG GCGCCGGC GTTGGTCATCACCGT RPD_4066 4519266 - 4518364 - | binding-protein-dependent transport systems inner membrane component RPD_4067 4520369 - 4519266 - | ABC transporter related RPD_4068 4521461 - 4520382 - | ABC transporter related glpD 4522999 - 4521458 - | glycerol-3-phosphate dehydrogenase TERM 3670 4521986 - 4522000 + g 71 -9.2 -3.76952 | opp_overlap 4521982 GAGCTCGAACACGTA GTCGCG GGT CGCGGC TTTGGCTTCGCTGGC TERM 3671 4522639 - 4522665 + g 86 -18 -2.82516 | opp_overlap 4522652 GTTCGACCGAGCGGG TCGGCGGCAGCA ATC TGCGGCCGCCGA TGTAATCGTACAGAA TERM 3672 4523024 - 4523036 + r 76 -9.1 -3.96705 | overlap 4523017 CAGCTCCTTCGAATT GCTGC ACT GCAGC TTTCGCTTTTATCGA RPD_4070 4524069 - 4523269 - | DeoR family transcriptional regulator TERM 3673 4523797 - 4523832 + g 82 -6.1 -4.72272 | gap 2, overlap 4523797 4523798 CAGCGAGCAGCCGTT C-GG-GATCTGCGCCGC CGCG GCGGCCCCGATCGCCCG TTTTTCCTCGGCAGC RPD_4071 4524786 - 4524169 - | hypothetical protein TERM 3674 4524619 - 4524607 - G 70 -6.2 -4.25104 | TGTCGTCGAGGAAAA GCCG ATCAG CGGC GGCGTGTAGTTGAAG RPD_4072 4525417 - 4524803 - | TetR family transcriptional regulator TERM 3675 4524931 - 4524920 - G 74 -5.8 -4.56597 | CTGCGGGTGGAAAAA GCGA ACCA TCGC GGTGCACGTGCAACC TERM 3676 4525064 - 4525093 + g 85 -7.9 -4.72272 | gap 1, overlap 4525086 GACGTCCCAGTTCTC CTCCATTGCGATGG CGA CCATCTC-GTGGAG TTTTTCGTCGCCGAC RPD_4073 4528576 - 4525436 - | acriflavin resistance protein RPD_4074 4529699 - 4528593 - | secretion protein HlyD RPD_4075 4530089 - 4529865 - | 3-demethylubiquinone-9 3-methyltransferase RPD_4076 4532762 - 4530132 - | multi-sensor hybrid histidine kinase RPD_4077 4533259 - 4533474 + | CsbD-like TERM 3677 4533522 - 4533555 + T 100 -16.9 -3.87869 | gap 1, opp_overlap 4533529, overlap 4533529 CCCGATTGAGATCAC CGC-GAAAGACCGGCT TCG AGCCGGTCTTTTTGCG TTTGTGCCAGGTTCA TERM 3678 4533529 - 4533547 + T 100 -14.6 -4.84529 | opp_overlap 4533529, overlap 4533522 GAGATCACCGCGAAA GACCGGCT TCG AGCCGGTC TTTTTGCGTTTGTGC TERM 3679 4533547 - 4533529 - T 85 -14.6 -3.5882 | opp_overlap 4533529 4533522 GAGATCACCGCGAAA GACCGGCT TCG AGCCGGTC TTTTTGCGTTTGTGC RPD_4078 4534551 - 4533568 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding RPD_4079 4536258 - 4534672 - | gamma-glutamyltransferase TERM 3680 4536091 - 4536064 - G 71 -9.2 -3.83323 | gap 1, opp_overlap 4536071, overlap 4536068 CTGATACAACGCAAA GCAATC-ACCGCC GAT GCCGGTCGATTGC GGCTCGATCACCGAC TERM 3681 4536419 - 4536446 + H 74 -4.6 -4.57569 | opp_overlap 4536418, overlap 4536419 GGGCTGATAGATCAT CGCGCAGACCCG GTCC CGGTCCGGCGTG TTTTTGCAGCAATGG RPD_4080 4536471 - 4536686 + | SlyX RPD_4081 4538386 - 4536848 - | AMP-dependent synthetase and ligase RPD_4082 4539367 - 4538705 - | cyclic nucleotide-binding TERM 3682 4539560 - 4539542 - R 100 -13.8 -4.52589 | opp_overlap 4539544 GCGGGCCAGACAAAA CCGCCGCG GGC CGCGACGG CCTAACCGCTTGATA RPD_4083 4540020 - 4539607 - | hypothetical protein TERM 3683 4539910 - 4539945 + g 82 -15.4 -3.36289 | gap 1, overlap 4539942 GATCATATTGTCGTC GGCGCCGTTCGAACCGG AAT CCGGATCG-GTGGCGCC TTCCTTGACGTCGTA TERM 3684 4539998 - 4539986 - G 71 -9.1 -3.78775 | overlap 4539987 TTCTCGATCAGGAAA CCGAC CTT GTCGG TCGAAATCGCGAGTT TERM 3685 4540963 - 4540975 + G 75 -4.7 -4.58773 | opp_overlap 4540961 CCGGCTACATCAAGC GCGAC GGC GACGC TTTTCGTTTGGTGGC RPD_4084 4540152 - 4541000 + | beta-lactamase-like TERM 3686 4541176 - 4541149 - g 70 -8.4 -3.96148 | overlap 4541150 4541170 GTTGGCCAGGAGAAA CCCGGCCTGATC GACA AATCAGGCCAGT TGCGCGATCTGTCGG TERM 3687 4541179 - 4541220 + G 70 -11 -3.53012 | gap 3, opp_overlap 4541170 AAATCAGGCCAGTTG CGCGATCTGTCGGCGCAGGTC GCA GACCT-TGCCGGC-GA-CGCG TTTGCGCCGGCCAGC RPD_4085 4541110 - 4541952 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase RPD_4086 4542034 - 4542651 + | glutathione S-transferase-like TERM 3688 4542686 - 4542713 + T 85 -14.2 -3.64703 | AGCATGAGGCGAAGC TGTGGCGCGC AAGGCAGC GCGCGCCACA TTTCAGTCGAACAGA RPD_4087 4543258 - 4542716 - | methylated-DNA--protein-cysteine methyltransferase RPD_4088 4544432 - 4543323 - | glycosyl transferase, group 1 TERM 3689 4544083 - 4544027 - G 73 -12.2 -3.44284 | gap 2, overlap 4544025 4544054 CGGTCATGAAGAACA GCCTGGTCGCGGCCGGCGATGCGAACAC GGC GCGCTC-CAGCGCCAGCCGCGTGC-GAC GCCGCGGCGGCCAGG TERM 3690 4544108 - 4544054 - G 70 -13.6 -3.05844 | gap 4, overlap 4544027 4544105 CCGGCGATGCGAACA CGGC-GCGCTCCAGCGCCAGCCGCGTGC GAC GC-CGCGGC-GGC-CAGGACCACAGCCG CCATTCGCGCAGGAT TERM 3691 4544629 - 4544616 - H 77 -4.5 -4.89852 | CGACATCGACAAAAA TCCAG GTGA CCGGA CCGGCGAAACGACCG TERM 3692 4544678 - 4544639 - H 70 -10.6 -3.55563 | gap 1 ACCGGACCGGCGAAA CGACCGCCGC-AGGGCGAG GAG CGCACCCTTGCGCGGGTCG CGACCCTTGAGCTAC RPD_4089 4544791 - 4546098 + | dihydrodipicolinate reductase TERM 3693 4546152 - 4546129 - T 100 -19.6 -5.10461 | opp_overlap 4546124 4546123 TTCAGTCAACAAAAA CGCCGCCTCG GCAA CGAGGCGGCG TCGGCATTCTGAAGC RPD_4090 4546768 - 4546187 - | hypothetical protein TERM 3694 4546984 - 4546958 - H 100 -15.1 -5.64274 | opp_overlap 4546958 TTAGTCACAAAAAAA CGCCGCGACCC TTTAG GGGTTGCGGCG TTTTTGTGTGTTTGA TERM 3695 4546958 - 4546984 + H 100 -18 -5.14985 | opp_overlap 4546958 TTAGTCACAAAAAAA CGCCGCGACCCT TTA GGGGTTGCGGCG TTTTTGTGTGTTTGA TERM 3696 4548330 - 4548343 + H 81 -4.5 -5.06816 | GTCATCTTGCGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT TERM 3697 4549933 - 4549880 - H 100 -22.7 -3.28791 | overlap 4549887 4549894 ACCTTCTCTTGATAA CCGGAAATCCAAAATCTCGCTGTCC TTGC GGACAACAAGACCTTGGAGTTCCGG CTATCGAAGGTGGGT TERM 3698 4549926 - 4549887 - H 90 -15.2 -3.69354 | overlap 4549880 4549894 CTTGATAACCGGAAA TCCAAAATCTCGCTGTCC TTGC GGACAACAAGACCTTGGA GTTCCGGCTATCGAA TERM 3699 4549919 - 4549894 - H 85 -10.5 -4.35926 | overlap 4549887 4549880 ACCGGAAATCCAAAA TCTCGCTGTCC TTGC GGACAACAAGA CCTTGGAGTTCCGGC TERM 3700 4550388 - 4550357 - H 84 -8.7 -4.40804 | overlap 4550358 4550359 4550380 TACGATGTCAGAAAA CCCGCGGACCTTC ATTGAA GAAGGTCGGCGAA TACAAGTCTCGCGGA TERM 3701 4553011 - 4553036 + G 70 -11.1 -3.53012 | GATGGGCCGAGTTTT TCCGGTTGGGG GTCG CCGCAGCCGGA TTTCGCCAGACAGGG RPD_4091 4552807 - 4553331 + | hypothetical protein TERM 3702 4553492 - 4553517 + G 85 -13.2 -4.14739 | overlap 4553485 TCTGACCGGCCTGTG CGGCGCAGCC TTGATC GGCGGCGCCG TTTTCGCGTCGCTCG TERM 3703 4555274 - 4555260 - g 71 -2.8 -4.58395 | overlap 4555262 4555263 GCGAGCTTCGAAAAA GAGC GCGACCG GCTC GACGGCATGTTGACC RPD_4092 4553328 - 4555373 + | peptidase M23B TERM 3704 4555354 - 4555379 + T 90 -2.4 -5.47218 | TGCGCAGCGTGAACG CGGCGGCGGC GCGGAA GTAGCTGCTG TTTTTTTGAATCGGC RPD_4093 4556498 - 4555635 - | hypothetical protein RPD_4094 4556743 - 4556994 + | hypothetical protein TERM 3705 4557021 - 4557044 + T 77 -13.8 -3.28712 | CCGTTCCCTGGACGC GGCGCAGCGC GCGT GCGCTGCACC TTGTCCGGGACACGG RPD_4095 4559703 - 4557064 - | ATPase AAA-2 TERM 3706 4558387 - 4558405 + g 79 -6.7 -4.57569 | gap 1 CACCAGCCGGGTCCT GGAG-CCG GTGT CGGTCTCC TTTTTCAGCGCCTCC TERM 3707 4559082 - 4559098 + g 75 -2.9 -4.72272 | overlap 4559072 CGACGCCGGGCTCGC CGATCAG CAC CGGATTG TTTTTGGTCCGGCGC RPD_4096 4559843 - 4560712 + | hypothetical protein TERM 3708 4560840 - 4560862 + T 80 -14.9 -3.14881 | AGCCTTCGGCTGCCA CCCTCTCCC ACAAG GGGAGAGGG TTAGTGCGAGCGTTC RPD_4097 4561672 - 4560878 - | hypothetical protein TERM 3709 4561307 - 4561364 + g 77 -16.3 -2.71364 | gap 2, overlap 4561297 4561313 4561336 CTCAGGCGCCGGCCG CGCCGAGCGGCGCTGCGCGCGCTGC TTGATCATGC GCGGCGCGC-CGATGCCGC-CGGCG TCGTTCGGCGCGTAG RPD_4098 4562579 - 4561887 - | methionine biosynthesis MetW metX 4563780 - 4562581 - | homoserine O-acetyltransferase TERM 3710 4563403 - 4563374 - G 75 -9.2 -4.15565 | opp_overlap 4563374 GTGATGACCGGAAAA TCCAGCCCCCAG GGTTTG CCGGTGGCCGGA TTGGTCGAGGCCGGG TERM 3711 4563878 - 4563852 - H 100 -14.5 -5.4833 | gap 1, opp_overlap 4563871 4563872 CGAGCCAATAAAAAA CCCGGCCTGAAC ATTG GTTC-GGCCGGG ATCGAAACTATCCCC RPD_4100 4564272 - 4565120 + | hypothetical protein TERM 3712 4566128 - 4566092 - g 73 -14.3 -3.21099 | opp_overlap 4566101 TTTCCCGACCACCAA GGGCAAGACCGCGGCGG AAG CCGACGCGTTCCTGACC AAGCGTGGGCTGGTG RPD_4101 4565160 - 4566257 + | histidinol-phosphate aminotransferase RPD_4102 4566254 - 4567198 + | cyclohexadienyl dehydrogenase TERM 3713 4567265 - 4567249 - T 76 -9.3 -4.015 | opp_overlap 4567248, overlap 4567250 CCATCCATCAAAGAA GGCGCGC TCC GCGCGCG ATGGATTCGCGGGTC TERM 3714 4567264 - 4567250 - T 71 -12.8 -3.00418 | opp_overlap 4567248, overlap 4567249 CATCCATCAAAGAAG GCGCGC TCC GCGCGC GATGGATTCGCGGGT RPD_4103 4568231 - 4567326 - | alpha/beta hydrolase fold TERM 3715 4568258 - 4568268 + r 81 -4 -5.0538 | CCATTTTTTCTCGTG TATC CCA GATA TTTTTTCGCATCCCA RPD_4104 4569753 - 4568470 - | phosphoribosylamine--glycine ligase TERM 3716 4569187 - 4569175 - G 71 -9.1 -3.76482 | GCACAGCACGAAGAA CGAGG CCT CCTCG CCGACCAGGAAATCC xseA 4569989 - 4571599 + | exodeoxyribonuclease VII large subunit RPD_4106 4572504 - 4571677 - | dienelactone hydrolase TERM 3717 4572643 - 4572677 + H 70 -9.8 -3.64716 | overlap 4572641 TGTGTGAGGCATCGG CCGCGGGCCGCGGAGC GGC GCTTCGCTGGTGGCGG TATTTTGGGAGATCA RPD_4107 4572696 - 4572923 + | hypothetical protein RPD_4108 4573984 - 4572968 - | tetraacyldisaccharide 4'-kinase RPD_4109 4575323 - 4573977 - | three-deoxy-D-manno-octulosonic-acid transferase-like TERM 3718 4574385 - 4574367 - G 76 -16 -2.87132 | overlap 4574369 GGTGTCCGCGACATA GACCGCGG TCG CCGCGGTC GGAAGCTGCTCGCGC TERM 3719 4574941 - 4574919 - G 82 -12.6 -3.92869 | overlap 4574920 4574932 CCAGTGATCGAGAAA GCGCGCCACG AAA CGCGGCGCGT CGTAGGGAATGAACT TERM 3720 4574940 - 4574920 - G 79 -16.1 -2.954 | overlap 4574919 4574932 CAGTGATCGAGAAAG CGCGCCACG AAA CGCGGCGCG TCGTAGGGAATGAAC TERM 3721 4574972 - 4574982 + g 72 -8.2 -4.07568 | GATGGATGATATCCG GCGG AAA CCGC TTTTCCACCACCGAC TERM 3722 4575147 - 4575170 + g 71 -15.2 -2.54574 | overlap 4575146 4575144 ATGCGCGGCGACGCC GCGGCGCTCG TCGA CGCGCGCCGC CTCTTCCTTGCCCTG RPD_4110 4575585 - 4575340 - | hypothetical protein RPD_4111 4576436 - 4575621 - | inositol-1(or 4)-monophosphatase RPD_4112 4577820 - 4576423 - | peptidase U62, modulator of DNA gyrase TERM 3723 4578156 - 4578184 + G 100 -22.5 -2.91383 | opp_overlap 4578136 GGGCGTAATCCCGCC GGGTCGAGCCGCG CTC TGCGGCTCGACCC TCTCTCACTGCCGAT RPD_4113 4577886 - 4578641 + | hypothetical protein TERM 3724 4578682 - 4578712 + T 75 -13.4 -3.0914 | opp_overlap 4578703, overlap 4578677 4578676 ACTCACGCTAGAGCT TTTCCGGTTCTGAT AGA ATCAGAACCGGAGC TCTCATTATTGTTTT TERM 3725 4578896 - 4578880 - T 75 -13.7 -3.01712 | TCCGGCCTCGTAACA CGCCGCA TCC TGCGGCG AGCAGCGCCGCGGCG ubiA 4579903 - 4578953 - | prenyltransferase TERM 3726 4579703 - 4579682 - G 75 -2.8 -4.72272 | overlap 4579667 4579684 4579685 4579694 CGCGCCGACGAAAAA CAGCGCGC AGAACA GCGCGAGG TGGCTGAGATCCTTG RPD_4115 4580634 - 4579900 - | hypothetical protein TERM 3727 4580394 - 4580356 - G 74 -12.3 -3.53012 | gap 1 TGGCGGCGCCGCAAA GCCGCCTGCACCGC-CCG CGAT CGGCGCTGCACCGGCGGC CGGAAACGCACCGCC TERM 3728 4580700 - 4580665 - H 74 -4.7 -4.64144 | opp_overlap 4580666, overlap 4580666 AAGAATCCCCAAAAA TCCGTCTGGCG-CGACG ATGC CGTCGTCGCCA-AGGGT CTTCTACGATTCCCG RPD_4116 4580822 - 4581577 + | hypothetical protein TERM 3729 4582761 - 4582751 - g 70 -2.4 -4.65916 | opp_overlap 4582759 TCGATCTGAAGAAAA CGCG GTT CTCG ACTTCGTTCGGCCGC hisZ 4581817 - 4582974 + | ATP phosphoribosyltransferase regulatory subunit TERM 3730 4583099 - 4583126 + G 72 -14.2 -2.98823 | gap 1 CTATCGCGGCACCAT CGCGGGCCTCGAC AAT GTCGAGGTC-GCG TATCTGTCGGCCAGC TERM 3731 4583494 - 4583452 - g 77 -13.3 -3.55563 | gap 1, overlap 4583426 4583453 ATCGCATCGTCGAAA GCGCCGGCGCC-ACCGAGGG CGCG CCCGCGGTCGGCACCGCCGA GATGATCGTCGACAT TERM 3732 4583493 - 4583453 - g 80 -16.8 -2.73124 | gap 1, overlap 4583426 4583452 TCGCATCGTCGAAAG CGCCGGCGCC-ACCGAGGG CGCG CCCGCGGTCGGCACCGCCG AGATGATCGTCGACA hisG 4582971 - 4583948 + | ATP phosphoribosyltransferase TERM 3733 4584484 - 4584519 + G 71 -14.6 -2.5805 | gap 1, overlap 4584506 CAAGGCGCATCGCGA CCACGAGCCGCGGCTGC GCC GC-GCCGCGGTGCGCGG CTTCTACGCGCTGAT TERM 3734 4584506 - 4584520 + G 71 -12.8 -3.30441 | overlap 4584484 CCGCGGCTGCGCCGC GCCGCG GTG CGCGGC TTCTACGCGCTGATC TERM 3735 4584786 - 4584832 + G 100 -21 -4.19624 | CGTTCTCGGTGGCCC CGCTGCGGATCGCCAGCG-CGC TCGGC GCGGCGCTGGCGATCGGC-GCG TTTCTGTTCGGCCTG RPD_4119 4584044 - 4585087 + | glycosyl transferase family protein RPD_4120 4585084 - 4585989 + | YdjC-like protein RPD_4121 4586088 - 4586963 + | putative periplasmic ligand-binding sensor protein TERM 3736 4587030 - 4587011 - T 100 -16.4 -4.19177 | ACCCGCGAACAGAAA CGGCCGCC CAAA GGCGGCCG TCATCGTCAGGAACT RPD_4122 4587845 - 4587054 - | ErfK/YbiS/YcfS/YnhG TERM 3737 4587932 - 4587913 - H 70 -7.2 -3.99405 | gap 1, overlap 4587914 4587920 GCAACGGATCAGAAA CCAAAACCG GAT CGGTTT-GG TAAACGGACGCCGCG TERM 3738 4587975 - 4587994 + H 100 -10 -4.68908 | opp_overlap 4587974 ACGCCGCCAAACCAG CGCTGTTC TTGC GGACAGCG TTTATTTTCGATGAA RPD_4123 4588139 - 4588912 + | hypothetical protein TERM 3739 4588936 - 4588978 + T 100 -31 -4.02817 | opp_overlap 4588927 4588928 4588960 AAACGACTTCGGCGG GTTAGAGCTCCGGTTCTGAT AAA ATCAGAACCGGAGCTCTAAC TTCTTATTCTGACGC TERM 3740 4589065 - 4589012 - T 72 -4.4 -4.56597 | opp_overlap 4589020, overlap 4589014 4589015 TTCTTCGGGCAAAAA GACGATCCGCGCCGC-CCGCAAGC GCTCTATT GCC-GCGGCGCCGCGCGCGGCGTC CGGATCAGCAGGAAG RPD_4124 4590246 - 4589038 - | major facilitator transporter TERM 3741 4589635 - 4589592 - G 79 -8.6 -4.32034 | CCAGCAGGATGAAAA CCCGCCCTTCGGGCCGCAGC GGTT GCTCCGGCACCAGATGCGGG CTGGGCGGGACCGCC RPD_4125 4590873 - 4590334 - | hypothetical protein TERM 3742 4590589 - 4590609 + g 71 -3.1 -4.65895 | overlap 4590590 GATCACATAGGGATT TCTGCACTG CGA CAGCGCGGC TTTTTCGGTGCGAGC TERM 3743 4590766 - 4590710 - G 70 -10.8 -3.53811 | gap 2, opp_overlap 4590704 4590715, overlap 4590711 GGTACTTCCGGCAAA GGCGCGGGCTCTGCCATTTCGGCCGGCT GCG AGCCG-CCGAAGCCGCCGAACCCGC-CA AAGCTGCCGCACGCG groES 4591148 - 4591444 + | co-chaperonin GroES groEL 4591484 - 4593136 + | chaperonin GroEL TERM 3744 4593169 - 4593192 + F 100 -18.2 -5.00616 | opp_overlap 4593164 4593172 GACCGATCAATCATG CAAGGCCGCC TCCG GGCGGCCTTG TTTTTTGGCGCGGCC TERM 3745 4593189 - 4593172 - f 76 -14.1 -3.14136 | opp_overlap 4593169, overlap 4593164 CGATCAATCATGCAA GGCCGCC TCCG GGCGGCC TTGTTTTTTGGCGCG TERM 3746 4593815 - 4593842 + G 70 -10.5 -3.72695 | CTGAGGCGGTCGGCG TCCGTGTCGGC CTGGAA GCCGCCGCGGA TTTCCTGAAGACGCT RPD_4128 4593295 - 4594485 + | hypothetical protein RPD_4129 4594602 - 4596116 + | FAD dependent oxidoreductase TERM 3747 4596271 - 4596226 - T 82 -2.8 -5.18726 | gap 3, opp_overlap 4596227 4596228, overlap 4596227 4596228 4596230 GCGTCAGAACAAAAA GTTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAGT TTGTGTTGAGCCGGA TERM 3748 4596227 - 4596270 + T 76 -8.5 -4.1891 | gap 3, opp_overlap 4596227 4596226 4596228 4596230, overlap 4596228 CGTCAGAACAAAAAG TTAGAGC-T--CCGGTTCTGAT TCT ATCAGAACCGGAAAAGCTCTAG TTTGTGTTGAGCCGG RPD_4130 4596680 - 4596267 - | hypothetical protein TERM 3749 4596779 - 4596760 - R 76 -5.7 -4.63218 | opp_overlap 4596777, overlap 4596776 4596777 TTCGCGCGAAGAAAA CGCGTCA GAACAA TAACGCG GGCTCCGGTTCTGAT TERM 3750 4596851 - 4596818 - R 85 -14.5 -3.60792 | CCTCCAATCCGGAAA CCTGAACCCCGCCGC CGTG GCCGCGGGGTTCCAG ACTACACGTTCGCCG RPD_4131 4598537 - 4596873 - | L-lactate transport RPD_4132 4598660 - 4600552 + | ABC transporter-like TERM 3751 4600792 - 4600769 - T 100 -18.2 -5.27476 | CCGAACAAAAGAAAA GGGCGGCAGA TCGC TCTGCCGCCC TCAAACCCCAGAAGG RPD_4133 4601813 - 4600815 - | hypothetical protein TERM 3752 4602230 - 4602207 - R 93 -18.2 -3.30474 | opp_overlap 4602203, overlap 4602200 GCCCACAACGAGCAA GGGCCACGGT GATG ACCGTGGCCC TACTGATCAATTCGA RPD_4134 4603275 - 4602271 - | hypothetical protein TERM 3753 4602937 - 4602947 + g 84 -5.4 -4.87803 | TTTCGCGGCAGCCTT CTTC GCC GAAG TTTTCTTTGCGGGTG TERM 3754 4603156 - 4603168 + g 85 -6.2 -4.87665 | overlap 4603141 GGCGGCCTTCTTGGC GGCC TTCTT GGCC TTTTTCTCCGTCAGC RPD_4135 4604660 - 4603347 - | protein of unknown function DUF224, cysteine-rich region TERM 3755 4604454 - 4604475 + g 74 -7.9 -4.17762 | gap 1 ATCGATATGCTTGAC CACGTCCGCC GTC GGCGG-CGCG TTGTTTTCCAGCATC RPD_4136 4605898 - 4604657 - | FAD linked oxidase-like TERM 3756 4604771 - 4604715 - G 75 -11.7 -3.64703 | gap 3, overlap 4604716 4604770 TTCCTGGGATCGAAA CTGTGTTTGACCCGCAGCCCGAGCGCGG CGAG CC-CGCTCGG-CTGCGGCTGGAACAC-G TCGACGCTCGCGCGA RPD_4137 4607412 - 4605919 - | D-lactate dehydrogenase (cytochrome) TERM 3757 4607164 - 4607188 + g 71 -12.1 -3.31144 | opp_overlap 4607135 4607163 4607162, overlap 4607150 CGAGGTGCCAGAACC GCGCGGCACCA CCT TGATGCCGTGC TTGTGGCAGTAGCGA RPD_4138 4608128 - 4607454 - | TetR family transcriptional regulator TERM 3758 4608181 - 4608125 - G 72 -11.6 -3.53012 | gap 1, overlap 4608128 GGGTCCGCCGGTAAA CCATGGCGTTCTCGTCCCGGGATCGAG CGTT CCCGATCCCGGAAAGAGATCGG-ACAG TCACCGCTCATCAAG TERM 3759 4608180 - 4608128 - R 77 -14.2 -2.90496 | gap 1, overlap 4608125 TCCGCCGGTAAACCA TGGC-GTTCTCGTCCCGGGATCGAG CGTT CCCGATCCCGGAAAGAGATCGGACA GTCACCGCTCATCAA RPD_4139 4608740 - 4608423 - | branched-chain amino acid transport RPD_4140 4609474 - 4608737 - | AzlC-like TERM 3760 4609703 - 4609686 - R 100 -14.1 -5.78622 | opp_overlap 4609686 CGAGCGCAAAAAAAA CGCGGCG TTTC CGCCGCG TTTTCGTAGATTCGA TERM 3761 4609686 - 4609703 + r 100 -14.1 -4.30978 | opp_overlap 4609686 CGAGCGCAAAAAAAA CGCGGCG TTTC CGCCGCG TTTTCGTAGATTCGA RPD_4141 4611646 - 4609730 - | ATP-dependent metalloprotease FtsH TERM 3762 4609915 - 4609934 + g 72 -7 -4.18494 | GCAGGCCCTTGGCGA GCGCTTCG AGGT CGGCGCGC TTTTCGGTGAGGATG TERM 3763 4611661 - 4611679 + r 75 -11.7 -3.53811 | TCGGTCTTCCTTATT GGTCGCG CGGAT CGCGACC TTTGGCCCAGGTACG RPD_4142 4612903 - 4611860 - | tRNA(Ile)-lysidine synthetase-like RPD_4143 4614044 - 4613007 - | hypothetical protein TERM 3764 4613652 - 4613610 - G 70 -13.3 -3.05384 | gap 2, overlap 4613614 CTGGCTCGGATCGAA GGCATCGCCGCGACGGCGGCC CGA GGGCGGCGGCGCGGCG--GCC TGGTCCTGCACGATC TERM 3765 4613650 - 4613614 - G 71 -14.9 -2.54896 | overlap 4613610 CTCGGATCGAAGGCA TCGCCGCGACGGCGGCC CGA GGGCGGCGGCGCGGCGG CCTGGTCCTGCACGA TERM 3766 4614077 - 4614121 + r 83 -12.9 -3.94877 | overlap 4614078 GTGATGGCGCGCCAG ATTGGAGCAGGATGACGCATC TTC GAACCGTCATTCTGCTCCAGA TTCTTGTTCGAGCAT TERM 3767 4614078 - 4614120 + r 83 -16.4 -2.96444 | overlap 4614077 TGATGGCGCGCCAGA TTGGAGCAGGATGACGCATC TTC GAACCGTCATTCTGCTCCAG ATTCTTGTTCGAGCA TERM 3768 4614279 - 4614262 - R 79 -14.1 -3.45571 | overlap 4614256 CGCCTCAAATAGCAA CGGCGCC CGAA GGCGCCG CCCATTCAACTTGTG RPD_4144 4614802 - 4614305 - | OmpA/MotB TERM 3769 4615118 - 4615060 - R 84 -17.5 -2.72144 | overlap 4615080 CGACTTTCCTGAAAG CCCGCCCAA-AACGCACAAAAGCCGCCGG AGG CCGGCGGCTTGAGCG-GTCATCGGGCGAG CGCCAAACGGCTCGC TERM 3770 4615098 - 4615080 - R 100 -17.4 -4.54477 | overlap 4615060 CCAAAACGCACAAAA GCCGCCGG AGG CCGGCGGC TTGAGCGGTCATCGG RPD_4145 4615903 - 4615145 - | hypothetical protein RPD_4146 4618397 - 4616064 - | GGDEF domain-containing protein TERM 3771 4618540 - 4618527 - R 74 -9.5 -3.91144 | GTGATAGCCGAGAAA CCCCG CCGT CGGGG CGTCGAACGGCAACC tolB 4619954 - 4618605 - | translocation protein TolB TERM 3772 4619373 - 4619389 + g 79 -11.5 -3.76224 | CAGCCGCTTGACGCG GCGGTCC GCC GGGCCGC TTTCATCGATGAACA RPD_4148 4620989 - 4620012 - | putative TolA TERM 3773 4620242 - 4620210 - G 76 -14.7 -3.21416 | opp_overlap 4620205 4620220 4620237 CAGGCGGATCACGAA GGCGGCTTCGGCGCG CTG CGCTTCGATGCCGCC ATACGGCTTCTTCCA TERM 3774 4620488 - 4620498 + g 89 -2.4 -5.29716 | overlap 4620449 CGGTCTGCGGCTTCG GCGG CGG CGGC TTTTTCTTCTCTTCC RPD_4149 4621516 - 4621046 - | biopolymer transport protein ExbD/TolR RPD_4150 4622237 - 4621554 - | MotA/TolQ/ExbB proton channel TERM 3775 4621730 - 4621709 - G 72 -13.7 -3.01712 | gap 1 CGGCGGTCGCGAACA GCGCCTCGGC GAT GCCG-GGCGC GACCACCGCCAGCGA RPD_4151 4622894 - 4622568 - | RNA polymerase ECF-type sigma factor RPD_4152 4623172 - 4622900 - | alkylhydroperoxidase AhpD core TERM 3776 4623299 - 4623263 - R 100 -20.8 -4.18018 | overlap 4623267 GGGGTCGACGCAAAA CGAAGCCGCCCGCCTG GGTTT CAGGCGGGCGGCGACG ACGATAGAAGTGATT TERM 3777 4623295 - 4623267 - R 100 -23.2 -3.69605 | overlap 4623263 TCGACGCAAAACGAA GCCGCCCGCCTG GGTTT CAGGCGGGCGGC GACGACGATAGAAGT RPD_4153 4623800 - 4623330 - | hypothetical protein RPD_4154 4624649 - 4623945 - | TetR family transcriptional regulator TERM 3778 4624610 - 4624628 + g 79 -11.6 -3.81146 | overlap 4624611 4624616 GATTGCCATGGTGAT AGCCGCGC TCG GCGCGGCG TTCTTCCTTGCGCCA TERM 3779 4624611 - 4624627 + g 73 -15.1 -2.88366 | overlap 4624610 4624616 ATTGCCATGGTGATA GCCGCGC TCG GCGCGGC GTTCTTCCTTGCGCC RPD_4155 4625303 - 4624884 - | hypothetical protein RPD_4156 4625728 - 4625883 + | hypothetical protein RPD_4157 4626205 - 4626029 - | hypothetical protein RPD_4158 4626489 - 4627277 + | short-chain dehydrogenase/reductase SDR RPD_4159 4627902 - 4627492 - | glyoxalase/bleomycin resistance protein/dioxygenase RPD_4160 4629196 - 4627937 - | sigma-70 region 2 TERM 3780 4628335 - 4628351 + g 73 -12.3 -3.35679 | GATACGCCCCGGTGC GGCGATG GCG CATCGCC TTGTCGATCAGCGCC RPD_4161 4629564 - 4629193 - | hypothetical protein RPD_4162 4630143 - 4629718 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3781 4630054 - 4630072 + g 70 -11.6 -3.36968 | CATCCGCACCGCCTC GCTGGCGC CGA GCGCCTGC TTGTAGAATTCGATG TERM 3782 4630187 - 4630214 + r 76 -9.8 -3.85698 | opp_overlap 4630195 4630196 CAGGACGAACAAGCG TGGCCAAAGCCG ACAG CGGCTGTGGCGA TTTCTGCCGGACCCG TERM 3783 4630334 - 4630383 + r 70 -10.5 -3.54424 | CCCCCACCCGGATCG CTGACGCGATCCGACCTCCCCCG CAAG CGGGAGAGGTTGCGCCGTGCCGG TTTGCGGGCATCCCG RPD_4163 4631716 - 4630460 - | putative OpgC protein, require for succinylation of osmoregulated periplasmic glucans TERM 3784 4631681 - 4631697 + g 73 -9.3 -4.0075 | overlap 4631686 4631692 GGCGGGGCCGATCAT CGCCACG TTA CGCGGCG TTTCGTTGCTTGCGT RPD_4164 4633324 - 4632011 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPD_4165 4633874 - 4633413 - | 4-hydroxybenzoyl-CoA thioesterase TERM 3785 4633807 - 4633783 - G 73 -3.5 -4.58663 | opp_overlap 4633775 ACGATCCCGGAAAAA TCCGTGTCC TCGTAAT AGACCCGGA CCTGCATGTGGTGAA RPD_4166 4634339 - 4634049 - | plasmid stabilization system protein TERM 3786 4634347 - 4634389 + r 100 -17.2 -3.81414 | opp_overlap 4634356 4634358 4634361, overlap 4634348 4634381 ACATTCATCGTGTTT GCTAGAGCAGATGACGCTTC TTC GAATCGTTATCTGCTCTAGA TTGTTGCTTGAGCAT TERM 3787 4634348 - 4634388 + r 93 -20.7 -2.88366 | opp_overlap 4634356 4634358 4634361, overlap 4634347 4634381 CATTCATCGTGTTTG CTAGAGCAGATGACGCTTC TTC GAATCGTTATCTGCTCTAG ATTGTTGCTTGAGCA ruvB 4635770 - 4634688 - | Holliday junction DNA helicase B RPD_4168 4636436 - 4636008 - | hypothetical protein ruvA 4637050 - 4636433 - | Holliday junction DNA helicase motor protein ruvC 4637906 - 4637208 - | Holliday junction resolvase TERM 3788 4637575 - 4637595 + g 79 -4.5 -4.74103 | opp_overlap 4637573 TGGATCGCCAACAGC CGCTCGGCC AAC GGCAGCGTG TTTTTCGGTTCAACG TERM 3789 4637963 - 4637907 - R 84 -15.8 -3.31263 | gap 2 AGCGGACGGGCACAA CCGGGATCCCGGATCTGCGGAGAAGCGC TAC GCGCTGCACCGC-G-TCCGGGACACAGG AATTACCCCGCCATC RPD_4171 4638712 - 4637966 - | hypothetical protein TERM 3790 4639169 - 4639193 + G 75 -9.2 -4.07568 | gap 1, opp_overlap 4639165, overlap 4639171 GACCGGAAGGACCAG CG-CGGCGCGG GCCT CCGCGACGTCG TTTTCGCAGGCCGCA TERM 3791 4639419 - 4639445 + G 74 -12.3 -3.62096 | opp_overlap 4639416, overlap 4639419 TCGACGATCGAAGCC GCGCGC-GCCGGC GCC GCCGGCCGCG-GC TTTGCGGTGGTCGCG TERM 3792 4639671 - 4639640 - g 93 -10 -4.63218 | overlap 4639642 GGTCGCCGAACAAAA CCGCACCACCGGCG ACGT CGCCGGCAACGCCG CGACCGCGAACACCT RPD_4172 4638903 - 4640657 + | methyl-accepting chemotaxis sensory transducer TERM 3793 4642406 - 4642429 + F 70 -10.2 -3.58343 | gap 1, opp_overlap 4642373 CACGATCGAGGCCGC CCGC-GCCGGC GAA GCGGGCCGCGG TTTCGCCGTGGTCGC TERM 3794 4642869 - 4642888 + F 100 -16.4 -4.96501 | opp_overlap 4642869 ACAGCTTACGATCAA CCGGCGCC CACG GGCGCCGG TTTCTTTTTGTGCGC TERM 3795 4642888 - 4642869 - f 86 -16.4 -3.21925 | opp_overlap 4642869 ACAGCTTACGATCAA CCGGCGCC CACG GGCGCCGG TTTCTTTTTGTGCGC TERM 3796 4643045 - 4643002 - f 80 -14.4 -3.21276 | gap 1, opp_overlap 4643010, overlap 4643000 GTCTTGGTGAGAATA GCGCCCGGCATACGGCCG-CG GCG CGACGGCCGCCCGGCGCGCGC CGGGCCAGAGGTTGT TERM 3797 4643685 - 4643628 - g 70 -9.8 -3.64162 | gap 3, overlap 4643629 ACCAATGATTGCAAA GTCTCCCGCGGCG-CGCCGGTCAGCGGCC TCG GCCCGCTGAGCAGCGTCG-C-CGTGCGAC TGCGCGACGGTAACG RPD_4175 4643064 - 4644683 + | hypothetical protein RPD_4176 4644673 - 4645920 + | hypothetical protein RPD_4177 4645926 - 4647380 + | pyridoxal-dependent decarboxylase TERM 3798 4648186 - 4648136 - g 71 -12.7 -3.23395 | opp_overlap 4648129 ACCGACGACGAGCAA CAGCT-CCGCTTCATGATGCGGATC AAC GATCCGC-TCAAGCAGTGGAAGCTG AGCCCGATGGACGTG RPD_4178 4647488 - 4648462 + | hypothetical protein RPD_4179 4649405 - 4648581 - | hypothetical protein RPD_4180 4649995 - 4649408 - | 5-formyltetrahydrofolate cyclo-ligase TERM 3799 4649546 - 4649511 - G 75 -9.5 -4.13767 | overlap 4649515 TGCTGCACGGCAAAA GCCAGCCCCGCGGCG ATGATG CGCCGCGATGCGCGC AGCGCCGCGAGCGTG TERM 3800 4649920 - 4649964 + g 72 -7.1 -4.18762 | gap 3, opp_overlap 4649928 4649929, overlap 4649929 CGGACCGCGCCTCGT CCG-GCAAAGCGAGCCGCCGCG CCAA TGCGGCCGCGCGC-T-GCTCGG TTTTGGATGCGGCTT TERM 3801 4649957 - 4649928 - G 72 -12 -3.53012 | opp_overlap 4649920 4649929, overlap 4649929 GCCTCGTCCGGCAAA GCGAGCCGCCGC GCCAAT GCGGCCGCGCGC TGCTCGGTTTTGGAT RPD_4181 4650416 - 4650874 + | hypothetical protein RPD_4182 4651318 - 4650983 - | transcriptional regulator RPD_4183 4651682 - 4651296 - | hypothetical protein RPD_4184 4652069 - 4652623 + | hypothetical protein RPD_4185 4653175 - 4652783 - | rhodanese-like protein RPD_4186 4653675 - 4653199 - | isoprenylcysteine carboxyl methyltransferase RPD_4187 4654074 - 4653769 - | hypothetical protein RPD_4188 4657151 - 4654071 - | heavy metal efflux pump CzcA TERM 3802 4654586 - 4654530 - G 81 -11.4 -4.01853 | opp_overlap 4654530 4654562 4654570, overlap 4654532 4654535 GAACAGCAGCAGAAA CACCAGCGC-CAGCGCGATCGGCACGAC GAT GCCGAGCCGCGC-CGCGGCGCGCTGCTG GTTCTCGAACTGGCC TERM 3803 4656069 - 4656030 - G 78 -15.1 -3.23216 | gap 2 GCGCATCAGCACGAA GGTGGCGAGCGCCGACAGC GGCA GC-GTCAGCGC-CACCACC AGCGCGGCGCGCCAA RPD_4189 4658450 - 4657152 - | secretion protein HlyD TERM 3804 4657362 - 4657323 - G 80 -9.2 -4.23674 | gap 1 CTGCACGAACACAAA GGCGTCGCTCCCCCGCC GCACCAT GGCGCCGGAGCG-CACC CGCCATTCGGCCTTG TERM 3805 4657867 - 4657914 + g 71 -9.2 -3.78934 | gap 1 GGCACTGCGCCGTAG GGAGCGAGCTGCTGCTCGC GGTCGAGATTG GTGCGCAGCAGC-CGTTCC TTGTTGTAGGCGACG RPD_4190 4658463 - 4658729 + | hypothetical protein RPD_4191 4659217 - 4658870 - | cytochrome b5 RPD_4192 4660497 - 4659232 - | ferric reductase-like transmembrane component-like TERM 3806 4659529 - 4659499 - G 70 -13.3 -2.98823 | gap 1, opp_overlap 4659499, overlap 4659469 4659501 GCGGCGGTAGAGATA CAGCA-GCCGCGCC GGAT GGCGCAGCCTGCCG TCGTTCAGCAACGCG RPD_4193 4660831 - 4660502 - | hypothetical protein TERM 3807 4660586 - 4660567 - G 74 -7.8 -4.21194 | CGCGATCATCGAAAA GCTTGAGC CCGC GCTCACGC GCGCGCTGCTCCATC RPD_4194 4662103 - 4661081 - | cysteine synthase TERM 3808 4661771 - 4661798 + g 86 -6.3 -5.02323 | gap 1, overlap 4661772 CGTCGGGCAAACGAT TGT-CTGTGCGC CCATC GCGCGCAGGACG TTTTGTTTCTCCTGG RPD_4195 4663099 - 4662113 - | hypothetical protein TERM 3809 4662733 - 4662699 - G 73 -11.2 -3.72695 | overlap 4662700 4662716 4662718 AGGGGGTCGAGCAAA TCGCCGACGCCGGCAA ATA CCGCCGGCTGCGGCGG GAGAACATTCATCAG TERM 3810 4662732 - 4662700 - G 73 -14.7 -2.83403 | overlap 4662699 4662716 4662718 GGGGGTCGAGCAAAT CGCCGACGCCGGCAA ATA CCGCCGGCTGCGGCG GGAGAACATTCATCA RPD_4196 4663984 - 4663103 - | hypothetical protein RPD_4197 4664090 - 4665049 + | LysR, substrate-binding RPD_4198 4665803 - 4665093 - | DSBA oxidoreductase TERM 3811 4665696 - 4665651 - G 87 -18.9 -2.78384 | gap 1 GTCGTCCGGAGCAGA CGCGGCCGGCGCCGCCCACGCC CTC GAAGCGGCCAGCGCCGG-CGCG AGCGACAGGGCCGTC RPD_4199 4669027 - 4665800 - | acriflavin resistance protein RPD_4200 4670025 - 4669024 - | secretion protein HlyD RPD_4201 4670347 - 4670027 - | regulatory protein, ArsR RPD_4202 4670456 - 4670659 + | hypothetical protein TERM 3812 4670759 - 4670808 + T 77 -14.3 -2.83894 | gap 1, opp_overlap 4670771, overlap 4670771 GCCGGCGCGCGACAT CCTTCGAGACGACCGGTCGCGCTC TGC GAGCGAGACCGGTCTCCTC-AAGA TGTGGTCGTGCTGGT TERM 3813 4670771 - 4670797 + T 86 -18 -2.79501 | opp_overlap 4670771, overlap 4670759 CATCCTTCGAGACGA CCGGTCGCGCTC TGC GAGCGAGACCGG TCTCCTCAAGATGTG TERM 3814 4670797 - 4670771 - T 86 -18 -2.62396 | opp_overlap 4670771 4670759 CATCCTTCGAGACGA CCGGTCGCGCTC TGC GAGCGAGACCGG TCTCCTCAAGATGTG RPD_4203 4671294 - 4670854 - | nitrogen fixation-related protein TERM 3815 4671325 - 4671282 - G 73 -11 -3.72363 | gap 1, overlap 4671275 4671302 GAGTGAAACGGGAAA CGGCGCGCGTCATCACACGAC CGC GCGATGTGAC-ACGCGCGGCG GCGGGCGATCACGCA TERM 3816 4671370 - 4671344 - R 75 -13.7 -3.10796 | gap 1 GGCGATCACGCAACA CGGCGACCGCGC GGAA GCGCGG-CGCCA GATCAGGTCCAATCA RPD_4204 4671945 - 4671412 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit RPD_4205 4672621 - 4672028 - | transcriptional regulator PadR-like TERM 3817 4672134 - 4672190 + g 79 -11.6 -3.84406 | gap 4, overlap 4672135 GCTTCGCGTAGATTG TCGAGCGCGGCGCGCAGCAG-CGGCGGC AGATC GCCGCCGTCCGC-GC-CGCCG-GCATGA TTGTTCTGCTGGCGC TERM 3818 4672638 - 4672683 + H 76 -9.9 -3.85698 | gap 1, opp_overlap 4672638 CCGGAACCTCTCAAA GATATATC-TTGCGTACTGCCG CCG CGGCAGACTGTAAAGATATATC TTTCTCGGACGAGCG RPD_4206 4673023 - 4673223 + | hypothetical protein RPD_4207 4674077 - 4673310 - | hypothetical protein RPD_4208 4674385 - 4674936 + | hypothetical protein TERM 3819 4674941 - 4674986 + F 75 -13.9 -3.02461 | gap 1 TGAAGTTCTGAGCGC CCGCGTCATTCCGGG-GCGCGC GCA GCGCGAACCCGGAATCCCGAGG TGTTGGAAAGCGTTC TERM 3820 4675254 - 4675305 + G 100 -23.3 -3.35996 | gap 3, overlap 4675302 TGAGTATCTCAACGC CGCCGCGGCCGATC-TGGTGAA-GGC GCT GCCGTTCGCCACGATCGGC-GCGGCG TTGTGGATCGCAATC TERM 3821 4676201 - 4676155 - g 75 -15.7 -2.80113 | gap 1, overlap 4676115 4676145 4676157 GACGATTCGACCACA GACGCGCCGGCGCCGGGCGGCG ATCC CGCCGCC-GCCGAAGCCGCGTC CCCCGGCGGCCCATG RPD_4209 4675090 - 4676283 + | peptidase M48, Ste24p RPD_4210 4676457 - 4677230 + | hypothetical protein RPD_4211 4677384 - 4678097 + | hypothetical protein RPD_4212 4678812 - 4678267 - | adenine phosphoribosyltransferase TERM 3822 4678926 - 4678888 - R 72 -12.3 -3.33261 | opp_overlap 4678886 4678885 4678883 CGGCAATTCGGATAA GCGTCGCCGGGGGTG TTAGCAGCC CGCCCCCGGCGGCAC ACGTGTTTGGATCAA RPD_4213 4681115 - 4678953 - | anthranilate synthase TERM 3823 4681046 - 4681081 + g 71 -14 -2.92192 | gap 1, overlap 4681042 AGGCCTCCACCGTGC GCGA-CACGCCAAGGCC CGC GGCGGTGGCGTGGTCGC TGTGCTTGGGTAGCG TERM 3824 4681187 - 4681168 - H 86 -12.1 -4.16785 | overlap 4681147 ACAGGACAAACGAAA GGCCGCC TCGCGT GGCGGCC TCGGGACGATTCAGA TERM 3825 4681485 - 4681466 - g 70 -2.1 -4.65895 | opp_overlap 4681465, overlap 4681480 GTCGTGATCGAAAAA GCCGA GGGCAATTAT TCGGC CTATGTGCCGGACCT RPD_4214 4681439 - 4681645 + | hypothetical protein RPD_4215 4682293 - 4681667 - | methyltransferase type 12 TERM 3826 4682134 - 4682085 - G 74 -10 -3.85817 | gap 2, opp_overlap 4682071 ATTTCGGCCGAGAAA TCGGTCGCGATCCA-TTC-CGCCG CGTG CGGCGCGAGGCGGATCGCGGTCGA TCCGGTGCCGCAGCC RPD_4216 4683726 - 4682317 - | hypothetical protein RPD_4217 4684132 - 4684308 + | hypothetical protein RPD_4218 4684656 - 4684438 - | PhnA protein TERM 3827 4684755 - 4684780 + r 79 -16.1 -2.52676 | opp_overlap 4684756 TGCCGGACCAAAAAA AGCGGCGCGGA TCGC TCCGCGCCGCG TCGATTCCGAGGATC TERM 3828 4684779 - 4684756 - R 100 -19.6 -5.52384 | opp_overlap 4684755 GCCGGACCAAAAAAA GCGGCGCGGA TCGC TCCGCGCCGC GTCGATTCCGAGGAT RPD_4219 4685483 - 4684794 - | OmpW TERM 3829 4685705 - 4685675 - R 74 -13.2 -3.2794 | opp_overlap 4685681 4685692, overlap 4685676 4685678 TGTGACGGACAGGAA TGAGCCGGGTCGCG CGC CACGACCCTGCTCT AGGGCCGGCTCGGGT TERM 3830 4685704 - 4685676 - R 80 -16.7 -2.5655 | opp_overlap 4685681 4685692, overlap 4685675 4685678 GTGACGGACAGGAAT GAGCCGGGTCGCG CGC CACGACCCTGCTC TAGGGCCGGCTCGGG TERM 3831 4685702 - 4685678 - R 72 -13.5 -2.82023 | opp_overlap 4685681 4685692, overlap 4685676 4685675 GACGGACAGGAATGA GCCGGGTCGCG CGC CACGACCCTGC TCTAGGGCCGGCTCG RPD_4220 4685964 - 4685704 - | hypothetical protein RPD_4221 4688068 - 4686158 - | AMP-dependent synthetase and ligase TERM 3832 4688122 - 4688142 + r 73 -6.7 -4.2704 | overlap 4688123 CATGTCGAGCTTTTA GCCGGGGCT GGC AACCCCGCC TTTGTTCCTAATCAA RPD_4222 4689006 - 4688242 - | tetratricopeptide TPR_2 TERM 3833 4688455 - 4688472 + g 79 -7 -4.57569 | GAGATTGGCGAGTTC GCGATC CCCGCA GATCGC TTTTTCCACCGCTCG RPD_4223 4689963 - 4689160 - | short-chain dehydrogenase/reductase SDR RPD_4224 4690651 - 4690277 - | hypothetical protein TERM 3834 4690660 - 4690624 - G 73 -13 -3.29144 | gap 2 CCAGCGTCTTCACAA CGCCCGCGGACGCGAGGC AGA GACTCACG-CCGCGG-CG ATCGCGTTGCGCGGC RPD_4225 4692768 - 4690648 - | TRAP transporter, 4TM/12TM fusion protein TERM 3835 4690855 - 4690816 - G 71 -12.8 -3.25823 | overlap 4690839 CCGCGTGTACAGGAA GCCGATCGCGACCATGCC GAAC AGCGCGATCGCGACCAGC GCCTTCACGGTGGCA TERM 3836 4692860 - 4692895 + r 100 -4.6 -6.34424 | gap 1, opp_overlap 4692861, overlap 4692861 4692863 TCGCCTTTCGAAATA AGATG-GATGGCCGGGT CAA GCCCGGCCATGACACCG TTTTTTTTTTGCGAG TERM 3837 4692861 - 4692894 + r 79 -8.1 -4.39028 | gap 1, opp_overlap 4692861, overlap 4692860 4692863 CGCCTTTCGAAATAA GATG-GATGGCCGGGT CAA GCCCGGCCATGACACC GTTTTTTTTTTGCGA TERM 3838 4692894 - 4692861 - R 74 -9.6 -3.90744 | gap 1, opp_overlap 4692861 4692860 4692863 CGCCTTTCGAAATAA GATG-GATGGCCGGG TCAAG CCCGGCCATGACACC GTTTTTTTTTTGCGA RPD_4226 4693870 - 4692917 - | TRAP transporter solute receptor TAXI family protein RPD_4227 4694026 - 4695303 + | major facilitator transporter TERM 3839 4696725 - 4696768 + G 72 -13.1 -3.14468 | overlap 4696736 4696753 CTGCGGCGCGACTGG CGCGATCCGAACTCGCCGC GCATCG GCGTCGAGTTCGTGTCGAG TTCGATCTCGTCGCC RPD_4228 4695402 - 4697009 + | twin-arginine translocation pathway signal TERM 3840 4697315 - 4697338 + F 81 -15.2 -2.98072 | overlap 4697311 4697322 4697324 CTTGCACGTATCCAG CGCCGGCGCG TTTG CACGCCGGCG TGTCGTTGTCGTCCG RPD_4229 4697380 - 4698387 + | twin-arginine translocation pathway signal TERM 3841 4698396 - 4698450 + F 71 -12.5 -3.02461 | opp_overlap 4698387 GCAATAGCCTGCCGC GAGACGCACCGCGCCCACGCGGCCG ATCCA CGGCCGCGGAGGCACACTGCGCCGC TGTTCGAGAACGTTG TERM 3842 4699523 - 4699483 - g 75 -15.5 -2.79183 | gap 1 TCGACGCGCATGAGA TCGCCGCGCATC-TCGAC GCGATG GTCGACGTCGCGCGGCGA CTGCGGTTGCGCAAC RPD_4230 4698651 - 4699868 + | putative cylclic diguanylate phosphodiesterase RPD_4231 4700704 - 4700003 - | hypothetical protein TERM 3843 4700813 - 4700767 - H 76 -9.4 -4.08767 | opp_overlap 4700775, overlap 4700769 GTGATTTGTTCAAAA CATGCGATGCC-GCCGCCGCGC CACGC GCGCGG-GGCTGGTATCGGAAG TCGGAGGAGACCGCA TERM 3844 4700811 - 4700769 - H 70 -10.6 -3.6422 | opp_overlap 4700775, overlap 4700767 GATTTGTTCAAAACA TGCGATGCC-GCCGCCGCGC CACGC GCGCGG-GGCTGGTATCGGA AGTCGGAGGAGACCG RPD_4232 4700832 - 4701137 + | hypothetical protein RPD_4233 4702384 - 4701164 - | hypothetical protein RPD_4234 4703100 - 4702474 - | NUDIX hydrolase TERM 3845 4703164 - 4703136 - H 100 -19.6 -3.72576 | GCGTGCCCGAGGAAA CCGTCGCCGCGA TGTTC CCGCGGCGACGG GGACGCCACGTATGA RPD_4235 4703176 - 4703595 + | thioesterase superfamily protein RPD_4236 4704874 - 4703609 - | hypothetical protein RPD_4237 4705705 - 4704959 - | HAD family hydrolase TERM 3846 4705138 - 4705163 + g 86 -18.3 -3.17212 | gap 1 CGATGGTGGCAAGGC CGGCG-CCGCGC GCC GCGCGGACGCCG TTGGTGGAATCCTCG RPD_4238 4707376 - 4706117 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 4708014 - 4707376 - | dithiobiotin synthetase RPD_4240 4709237 - 4708011 - | 8-amino-7-oxononanoate synthase TERM 3847 4709227 - 4709213 - G 78 -10 -4.15044 | opp_overlap 4709207 CTCCGTCGCAACAAA TCCGTC GCC GACGGA TTCGCCTCATTCACG RPD_4241 4709400 - 4709933 + | hypothetical protein RPD_4242 4711375 - 4709984 - | ATP-binding region, ATPase-like RPD_4243 4712031 - 4711372 - | response regulator receiver TERM 3848 4713144 - 4713173 + G 70 -13.5 -3.04144 | TCTATGTCGCGCAGA CCGGCGATGCGCC GCGC GGCGCATCGGCGC TGTTCGCGCTCGGCC TERM 3849 4713495 - 4713533 + G 100 -20.2 -3.01712 | overlap 4713476 CGCTGATCGTCGGCG CCGCCGGCGGCAGCGACG ATC CGTTGCGGCCGCTCGCGG TGTTCGGCGCCGACC RPD_4244 4712135 - 4713937 + | protein-disulfide reductase RPD_4245 4713964 - 4714596 + | DSBA oxidoreductase RPD_4246 4714602 - 4715276 + | ErfK/YbiS/YcfS/YnhG RPD_4247 4716650 - 4715292 - | twin-arginine translocation pathway signal TERM 3850 4715329 - 4715368 + gT 76 -10.7 -3.73775 | gap 1, opp_overlap 4715305, overlap 4715329 ATGCCGGCGTACCAG C-CCGCCGCTTCGCGC GCCTGCTTG GCGCGGAGCTGCGGAG TTTCGTCGAGCTGCG TERM 3851 4715421 - 4715439 + gT 81 -13.8 -3.62046 | GATCTTGCCGTCCTG CGGCGCGT AGC GCGCGCCG TTCTTGACCGCGTCG TERM 3852 4716462 - 4716417 - GT 74 -13.9 -2.91264 | gap 1 GCCGTGACGCAGATA CTTCGCCGCGGTCG-CGCCGCC GGC GCCGCCGCCGACCACGACGACG CGCGGCTTCGCCTTG TERM 3853 4716585 - 4716613 + gT 95 -20.3 -2.63596 | opp_overlap 4716585, overlap 4716590 TCTCCGAACGGGAAA CGCAAGCCGGCGC GGC GCGCCGACTTGCG TGGTCTCAGGTGAAG TERM 3854 4716613 - 4716585 - GT 100 -22.5 -3.66178 | opp_overlap 4716585 4716590 TCTCCGAACGGGAAA CGCAAGCCGGCGC GGC GCGCCGACTTGCG TGGTCTCAGGTGAAG TERM 3855 4716590 - 4716608 + gT 70 -11.6 -3.11634 | opp_overlap 4716585, overlap 4716585 GAACGGGAAACGCAA GCCGGCGC GGC GCGCCGAC TTGCGTGGTCTCAGG RPD_4248 4717881 - 4716619 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPD_4249 4718324 - 4717878 - | putative cytochrome subunit of sulfide dehydrogenase RPD_4250 4719460 - 4718369 - | protein of unknown function DUF395, YeeE/YedE TERM 3856 4719368 - 4719356 - G 72 -4.7 -4.55287 | overlap 4719358 CGCACGCAGACAAAA CCTGC TCC GCTGG GCGCATGCTCCAAAC RPD_4251 4720372 - 4719644 - | putative cytochrome RPD_4252 4721633 - 4720356 - | twin-arginine translocation pathway signal RPD_4253 4723387 - 4721690 - | twin-arginine translocation pathway signal RPD_4254 4723862 - 4723533 - | putative sulfur oxidation protein SoxZ RPD_4255 4724368 - 4723904 - | sulfur oxidation protein SoxY TERM 3857 4724653 - 4724636 - g 72 -6.9 -4.21922 | opp_overlap 4724636 CGAGCGAAAAGGAAA TCGAGCG TTAT CGCGCGA TGATCTCCGATCCGA RPD_4256 4724545 - 4725363 + | hypothetical protein RPD_4257 4725377 - 4726147 + | hypothetical protein RPD_4258 4726175 - 4726681 + | hypothetical protein RPD_4259 4727410 - 4726820 - | hypothetical protein RPD_4260 4728177 - 4727434 - | cytochrome c biogenesis protein, transmembrane region RPD_4261 4728218 - 4728649 + | hypothetical protein RPD_4262 4728655 - 4729032 + | ArsR family transcriptional regulator TERM 3858 4729084 - 4729058 - Tf 74 -14.4 -2.59564 | overlap 4729057 GCCGCAGCGCACAAG GCCACGCGATCG ACG CGACCGCCTGGC GGCGTCGAGGGAACC TERM 3859 4729135 - 4729164 + GT 77 -4.1 -4.76041 | overlap 4729136 TTGCTGCTCGCGCTG ACCGGCCTCTG CATCGGAA CGGCGGCCGGC TTTTTCGTGCGTCTG TERM 3860 4729705 - 4729680 - gT 72 -11.7 -3.28712 | GGCGTTTGGCGACAA GCGGCTGCGGC GAAC GCCGCGGCTGC TGGCGGCCGGCGTCG RPD_4264 4730671 - 4730219 - | hypothetical protein RPD_4263 4729102 - 4730304 + | protein of unknown function DUF395, YeeE/YedE RPD_4265 4731063 - 4731563 + | hypothetical protein RPD_4266 4731628 - 4731921 + | hypothetical protein RPD_4267 4731930 - 4733396 + | copper tolerance protein RPD_4268 4733410 - 4734789 + | twin-arginine translocation pathway signal RPD_4269 4734840 - 4735325 + | blue (type1) copper domain-containing protein TERM 3861 4735464 - 4735449 - g 75 -3.2 -4.74103 | gap 1, overlap 4735450 4735451 GGGCGAAGTGAAAAA GGTCGAC GAG GCCG-CC AAGAAGATCACGCTC RPD_4270 4735348 - 4735647 + | hypothetical protein TERM 3862 4736049 - 4736021 - g 79 -2.3 -5.06414 | TCCCCGCAACAAAAA GCTGATGATCGTG CCT CTCAAGGATCAGC TCTCGCCCGGCGACT RPD_4271 4735773 - 4736141 + | copper resistance protein CopC TERM 3863 4736720 - 4736733 + G 79 -6.7 -4.58395 | TCCATCGACGTCGAT CGCAT GCTG ATGCG TTTTTCCGGAATGGG RPD_4272 4736141 - 4737073 + | copper resistance D TERM 3864 4737071 - 4737120 + T 74 -10.1 -3.68798 | gap 3, opp_overlap 4737056 4737071 4737074, overlap 4737067 4737072 CCCGCGATCGGACAA TGA-CC-A-CGCGGGAGGCAGCCG CTCGA CGGCCGCCTCCCGCGCTCGGCTGA TTACTTCTTTTCACC TERM 3865 4737118 - 4737071 - T 88 -16.2 -3.32844 | gap 1, opp_overlap 4737071 4737067 4737072, overlap 4737056 4737074 CCCGCGATCGGACAA TGACCA-CGCGGGAGGCAGCCGC TCG ACGGCCGCCTCCCGCGCTCGGCT GATTACTTCTTTTCA TERM 3866 4737072 - 4737117 + T 83 -16.8 -2.93765 | gap 1, opp_overlap 4737056 4737071 4737074, overlap 4737071 4737067 CCGCGATCGGACAAT GACCA-CGCGGGAGGCAGCCG CTCGA CGGCCGCCTCCCGCGCTCGGC TGATTACTTCTTTTC TERM 3867 4737115 - 4737074 - T 93 -20.9 -2.83822 | gap 1, opp_overlap 4737072 4737071 4737067, overlap 4737056 4737071 GCGATCGGACAATGA CCA-CGCGGGAGGCAGCCGC TCG ACGGCCGCCTCCCGCGCTCG GCTGATTACTTCTTT RPD_4273 4737363 - 4737121 - | hypothetical protein TERM 3868 4737209 - 4737220 + g 84 -7.2 -4.7373 | GTCTTCTTTGCCACC CCCG TGTC CGGG TTTTTGGTCGCGTGC RPD_4274 4738254 - 4737622 - | hypothetical protein RPD_4275 4738802 - 4738251 - | RNA polymerase sigma factor TERM 3869 4738870 - 4738885 + r 81 -10.4 -4.18197 | opp_overlap 4738868 CACGCAGGAAAATCG CGCCGA CGCC TCGGCG TTTTCCATGCGCAAT TERM 3870 4738967 - 4738938 - R 73 -11.4 -3.63895 | CTCAACGAGGTCAAA GGGCCGACTACC CCCGCC GGTAGCGGGCCC GATCCGGTTGACGGT TERM 3871 4739335 - 4739373 + r 71 -8.8 -3.96148 | gap 1, opp_overlap 4739329, overlap 4739336 ACCAACTGAGCTACC TGGGCGTTCCGTCCGGC GCGAAG GCCGGG-GGAGCGCCGG TTTATAGTCAGCCGC RPD_4276 4740415 - 4739792 - | Maf-like protein RPD_4277 4741223 - 4740774 - | protein tyrosine phosphatase RPD_4278 4741843 - 4741352 - | hypothetical protein hisD 4743165 - 4741840 - | histidinol dehydrogenase RPD_4280 4743719 - 4743273 - | hypothetical protein RPD_4281 4745029 - 4743740 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 3872 4744574 - 4744604 + g 81 -11.1 -4.07885 | gap 1, opp_overlap 4744574 CTTGGCAACCACATA GC-CGGCGTCGATC GACA GCTCGGCGCCGAGC TTTTCCAGCGCCATG RPD_4282 4745488 - 4745198 - | hypothetical protein TERM 3873 4745651 - 4745627 - H 70 -7.8 -4.0098 | gap 1, opp_overlap 4745646, overlap 4745628 TTCCAATGCAAACAA TCGCC-GAGCG TTAT CGCTCTGGCGG ATTCAGCCGATGTTC RPD_4283 4745740 - 4746033 + | hypothetical protein TERM 3874 4746108 - 4746068 - T 100 -18.4 -3.72695 | opp_overlap 4746077 4746079, overlap 4746077 AGTCTGCGTATCAAA CATTCAAAAGCCCCGGCC CGCGC GGCCGGGGCTTTTTCATG CGCAGCTCCCGCCGC TERM 3875 4746099 - 4746077 - T 100 -17.7 -4.32903 | opp_overlap 4746077 4746079, overlap 4746068 ATCAAACATTCAAAA GCCCCGGCC CGCGC GGCCGGGGC TTTTTCATGCGCAGC TERM 3876 4746077 - 4746099 + T 100 -17.7 -4.72272 | opp_overlap 4746077 4746068, overlap 4746079 ATCAAACATTCAAAA GCCCCGGCC CGCGC GGCCGGGGC TTTTTCATGCGCAGC RPD_4284 4746525 - 4746265 - | hypothetical protein TERM 3877 4746623 - 4746662 + G 71 -2.9 -4.63932 | gap 2, overlap 4746600 TCTTCCTTCGGGAGA CGTGACGTTGCTGCGACCG CTGT TGGCCG-AG-AACGTGACG TTTTATTCGCCGGTG RPD_4285 4746543 - 4746989 + | hypothetical protein TERM 3878 4747333 - 4747363 + T 72 -11.9 -3.26471 | gap 1 CCGACCTGACCGGCA GCGGCGCTCCGATC ATGC GATCGGAG-GACGC TTGGTGTGCCAGTCG RPD_4286 4748745 - 4747345 - | amidase RPD_4287 4749592 - 4748831 - | short-chain dehydrogenase/reductase SDR RPD_4288 4750403 - 4749678 - | ABC transporter related RPD_4289 4751112 - 4750393 - | ABC transporter related RPD_4290 4752189 - 4751116 - | inner-membrane translocator RPD_4291 4753068 - 4752202 - | inner-membrane translocator TERM 3879 4753091 - 4753116 + r 87 -17.6 -2.94062 | overlap 4753086 4753086 TCCTGGTTCCGGATA TCGGCGCCGC CGCGTC GCGGCGCCGA TGTGGTCTTGGTGTG RPD_4292 4754422 - 4753184 - | putative urea/short-chain amide transport system substrate-binding protein RPD_4293 4755450 - 4754452 - | acetamidase/formamidase RPD_4294 4756867 - 4755467 - | amidase TERM 3880 4756891 - 4756930 + H 71 -11.2 -3.53224 | ACTCCCCACGTTTTG CGCCGAGGCATTCGCGGC AATC GCCGCGCGTGCACCAGCG TTTCGACGACGCATC TERM 3881 4756932 - 4756957 + H 100 -13.3 -4.63218 | overlap 4756933 CGCGTGCACCAGCGT TTCGACGACGC ATCG GCGTCGTCGAC TTTTCTTCAGCGACA TERM 3882 4756933 - 4756956 + H 88 -16.8 -3.3761 | overlap 4756932 GCGTGCACCAGCGTT TCGACGACGC ATCG GCGTCGTCGA CTTTTCTTCAGCGAC TERM 3883 4757017 - 4756984 - H 100 -17.5 -5.75822 | gap 1, opp_overlap 4757015 GACAAACGAAAAAAA GCCACCCGTC-CCCCG AAA CGGGGTGACGAATGGC TCGGATGCCGCGGCT TERM 3884 4758077 - 4758059 - g 72 -8.8 -4.07568 | opp_overlap 4758050, overlap 4758060 CCGCCTGCCCGAAAA CCGCGC TTTCGTC GCGCGG TGGAAAGCGCGTTAC RPD_4295 4757280 - 4758446 + | putative aliphatic amidase expression-regulating protein, AmiC RPD_4296 4758443 - 4759027 + | ANTAR RPD_4297 4760206 - 4759052 - | ribonuclease BN, putative TERM 3885 4761924 - 4761885 - g 70 -12 -3.37245 | gap 1, opp_overlap 4761891 CGATCCGAAGATCAA GGCCGACGCC-GCCGCGCG CGC CGCGCTGCTGACGCCGATC GCGAAGGCGTTCTCC RPD_4298 4760743 - 4762524 + | acyl-CoA dehydrogenase-like RPD_4299 4762720 - 4763481 + | enoyl-CoA hydratase/isomerase RPD_4300 4766484 - 4763521 - | Outer membrane autotransporter barrel RPD_4301 4767276 - 4766704 - | hypothetical protein TERM 3886 4767438 - 4767495 + H 75 -11.9 -3.54741 | opp_overlap 4767461 CTTTCTTCCTCCGGA CCGGCGTCCACTTCGCGCGAAAACGCT TTTG AGCATGATTCCGAAAAGTGGACGCCGG TTTCCGGAAATGATC TERM 3887 4769203 - 4769223 + G 73 -11.1 -3.69373 | ACGGATCGGCTGACC GGCGTCTAC GAC GTCGACGCC TTGTTCGGCTATTTC RPD_4302 4767472 - 4769295 + | 5'-nucleotidase-like TERM 3888 4769625 - 4769603 - g 86 -9 -4.63218 | TCGCCGTCAACAAAA CGCTGACCGC AGA GCGGTTCGCG ACGCTGGCGCGCGGC TERM 3889 4769867 - 4769833 - g 77 -12.1 -3.72893 | gap 1, opp_overlap 4769792 GACGCGGTGATGAAA GGCAGCGCCGCCAACG CCTT CGTCG-CGACGCGGCC GCCCGGTCACCACGC RPD_4303 4769506 - 4770435 + | histone deacetylase superfamily protein RPD_4304 4770504 - 4770755 + | exodeoxyribonuclease VII small subunit TERM 3890 4770948 - 4770975 + F 88 -14.2 -3.77241 | gap 1 AGTTTGCGCAGACTG GCCAGGCCGTGGG CGG CCCACGGT-TGGC TTTGAATTGAGCTTT TERM 3891 4771093 - 4771131 + F 76 -10.5 -3.96148 | gap 1, opp_overlap 4771102 GTGATCCAGATCACT TCAACTGAACGAGGCG CACCGTAA CGCTTCGTTC-GTTGA TTTCTCCTGAGCAAG TERM 3892 4771554 - 4771498 - g 71 -15.1 -2.53271 | gap 2, overlap 4771497 CTATCCCCACAAGAT CCTGACCGGCCGCC-GCGAC-CGCATC CGCAC GCTGCGCACCGCTGGCGGCCTGTCCGG CTTCACCAAGCGCAC RPD_4305 4771250 - 4773166 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3893 4773241 - 4773218 - f 86 -16 -3.14344 | gap 1 CAGCGCGCTCACCAA CGGGTCCGGCC TTC GGCCGG-CCCG ATGACAGGCTCCGTG TERM 3894 4773302 - 4773263 - f 100 -21.6 -3.05384 | overlap 4773277 GGCTCCGTGAGCGAA CCCGGAATCCATAACCCC TGCA GGGAGTATGGATTCCGGG CCTTCGCCACGATCG RPD_4306 4773346 - 4773915 + | nucleoside 2-deoxyribosyltransferase RPD_4307 4773918 - 4774658 + | hemolysin A TERM 3895 4774775 - 4774733 - f 100 -33.8 -5.18726 | opp_overlap 4774737 4774741 GCGTCAGAACAAAAA GCTGGAGCTCGGGTTCTGAT TTG ATCAGAACCCGAGCTCCAGC CAGAACCAAAGTCTT TERM 3896 4775762 - 4775816 + G 81 -14.9 -3.54424 | gap 1, overlap 4775806 GCTCGCCGCGACCGT GCGGGTCGGCCATGCGGTCGGCCG CCACGATC CGGCCGGC-GCACGGCGGGCCGGC TTTGCCGCGATCGGG RPD_4308 4774824 - 4776236 + | MATE efflux family protein RPD_4309 4776343 - 4777581 + | RNA methyltransferase RPD_4310 4778143 - 4777733 - | hypothetical protein RPD_4311 4778472 - 4778140 - | hypothetical protein TERM 3897 4778650 - 4778679 + H 100 -10.7 -4.6902 | overlap 4778651 CTTGGACTCGCCTGA TCAGGGTGCTATG CCAC CGTAGCACCCCGG TTTTTGGCCTTCTCA TERM 3898 4778651 - 4778678 + H 74 -12 -3.40689 | overlap 4778650 TTGGACTCGCCTGAT CAGGGTGCTATG CCAC CGTAGCACCCCG GTTTTTGGCCTTCTC RPD_4312 4778772 - 4780760 + | transketolase RPD_4313 4780884 - 4781891 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3899 4782607 - 4782593 - g 72 -11.4 -3.61398 | CGTCGCGCTGAACAA GGCGCT GGA AGCGCC CACCAGACCGGTGAT pgk 4782051 - 4783247 + | phosphoglycerate kinase RPD_4315 4783332 - 4783613 + | hypothetical protein TERM 3900 4783634 - 4783692 + G 79 -13.1 -3.65902 | gap 1, overlap 4783635 GGCGACGTCGTTCTG GTCGCGATGCTAGGCGACGATGGCAAGC CCAG GCCTGCCGTCGTCGTCCAGCA-CGAGGA TTTCGATCAGATCCC TERM 3901 4783635 - 4783691 + G 77 -16.6 -2.79327 | gap 1, overlap 4783634 GCGACGTCGTTCTGG TCGCGATGCTAGGCGACGATGGCAAGC CCAG GCCTGCCGTCGTCGTCCAGCA-CGAGG ATTTCGATCAGATCC TERM 3902 4783900 - 4783913 + G 76 -2.3 -4.8543 | GATCACCGCGGTCAA TCGCG CCCT CGCCA TTTTTCTGGGCATTG RPD_4316 4783610 - 4783933 + | PemK-like protein RPD_4317 4784004 - 4785032 + | fructose-bisphosphate aldolase RPD_4318 4785038 - 4785709 + | thiamine monophosphate synthase TERM 3903 4785930 - 4785904 - g 83 -8.7 -4.6902 | gap 2, overlap 4785895 4785905 4785919 GGACAAGGCCAAAAA GCCTGCGGCCGAC AAG GCCGG-CGC-GGC GAAGCCCGGCGGCGC TERM 3904 4785952 - 4785919 - g 78 -14.5 -3.28712 | overlap 4785904 4785905 GCCTGCGGCCGACAA GGCCGGCGCGGCG AAGCCCGG CGGCGCGCCGACC GCCGAGGACGCCGCC RPD_4319 4785713 - 4786816 + | Sel1 TERM 3905 4786881 - 4786924 + F 85 -15.4 -3.41878 | gap 1, opp_overlap 4786913, overlap 4786864 4786903 GCGCAGGGCACCCCT TCGGCCGCTTTCGGTTCCGAT GGC GTCAGAACCG-AAGCGTCCGA TTCTGGCTTCGACGC RPD_4320 4787043 - 4787831 + | inositol-1(or 4)-monophosphatase TERM 3906 4787954 - 4787971 + F 73 -7 -4.3586 | CGACGGCCGTGCCGC GCTGCA AAAATC TGCAGC TTTTGATCTGGATCA RPD_4321 4788206 - 4788529 + | hypothetical protein TERM 3907 4788545 - 4788566 + F 76 -5.8 -4.56597 | gap 1, overlap 4788546 GGCGGGGAGACTATC TGCGGAGCG ATACC CGC-CCGCG TTTTTGACCAGAGAC RPD_4322 4788835 - 4789914 + | radical SAM family protein TERM 3908 4790131 - 4790089 - f 91 -20.9 -2.71011 | gap 1, opp_overlap 4790084, overlap 4790098 ATGGCCTGCGAACGA TCGACGAC-ATCACGTCGGA GCTT TCCGACGTGATCATCGTCGA GCCGGATGTGCTGCA TERM 3909 4790121 - 4790098 - f 78 -15.4 -2.8194 | opp_overlap 4790084, overlap 4790089 GAACGATCGACGACA TCACGTCGGA GCTT TCCGACGTGA TCATCGTCGAGCCGG RPD_4323 4790137 - 4791258 + | radical SAM family protein RPD_4324 4791280 - 4791837 + | hypothetical protein TERM 3910 4791981 - 4791929 - T 90 -13.5 -4.07885 | gap 2, overlap 4791930 CACCTCGCTCGAAAA CGCTCCAG-CATGGATGGC-CGGGC CGCAC GCCCGCGCCATCCATGACCGCTGCA TCTGGAGCGCAAGCC TERM 3911 4791980 - 4791930 - T 78 -14.8 -3.04517 | gap 2, overlap 4791929 ACCTCGCTCGAAAAC GCTCCAG-CATGGATGGC-CGGGC CGCAC GCCCGCGCCATCCATGACCGCTGC ATCTGGAGCGCAAGC RPD_4325 4792933 - 4792013 - | peptidase U32 TERM 3912 4792204 - 4792247 + g 78 -14.7 -3.31144 | gap 3, opp_overlap 4792177 CCACCATGTCGCATT GCTGCGGCGACAGCCG-CATCG CGC CGACGCCGGC-GTCGC-GCAGC TTGTCGACGTCGCCG TERM 3913 4792558 - 4792534 - G 77 -12.1 -3.64703 | opp_overlap 4792533 4792535 CCGGCGGCAGGCAAA TCCGCGTCGCG CCG CGCGAGGCGAA GTATGTCGCGGTGGC TERM 3914 4792996 - 4793017 + r 76 -11.5 -3.72576 | TCGATCGTCATTGTC GCCGGCGCT GAAC AGCGCCAGC TTTCGTGAGCGCCAG RPD_4326 4794060 - 4793083 - | peptidase U32 RPD_4327 4794608 - 4794051 - | hypothetical protein RPD_4328 4794723 - 4796261 + | carboxylyase-like protein RPD_4329 4796258 - 4796860 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RPD_4330 4797487 - 4796894 - | hypothetical protein RPD_4331 4797584 - 4798138 + | hypothetical protein RPD_4332 4798142 - 4798375 + | helix-turn-helix type 3 TERM 3915 4798357 - 4798393 + T 78 -15.1 -2.7419 | opp_overlap 4798361, overlap 4798391 CGACAGCCTGCAAAC GAAACCGGCATCCGCCT GAG AGGCGGATGCCGGCTGG TCGTTCAGATCATCT TERM 3916 4798389 - 4798361 - T 100 -24.7 -4.06055 | opp_overlap 4798357 AGCCTGCAAACGAAA CCGGCATCCGCCT GAG AGGCGGATGCCGG CTGGTCGTTCAGATC RPD_4333 4798677 - 4798489 - | hypothetical protein RPD_4334 4799011 - 4798754 - | hypothetical protein RPD_4335 4800243 - 4799218 - | cyclopropane-fatty-acyl-phospholipid synthase RPD_4336 4801064 - 4800240 - | hypothetical protein TERM 3917 4802025 - 4802012 - g 75 -9.5 -4.09685 | CGCTACCGCTGAAAA CGGCG GCGG CGCCG GCAGCGGCGAACTGC RPD_4337 4801260 - 4802261 + | hypothetical protein RPD_4338 4802327 - 4803352 + | hypothetical protein RPD_4339 4803552 - 4803995 + | GCN5-related N-acetyltransferase RPD_4340 4804033 - 4804260 + | hypothetical protein RPD_4341 4804257 - 4804550 + | plasmid stabilization system protein RPD_4342 4806478 - 4804559 - | ABC transporter, ATP-binding/permease protein TERM 3918 4804715 - 4804761 + g 81 -12.3 -3.84719 | gap 2, overlap 4804714 ATGCGCGATCACCAG CG-TGGTGC-GGTCGCGCATCAG GCC CTGCAGCGCGGTCTGCACCAGCG TTTCGCTTTCGGCGT TERM 3919 4805478 - 4805462 - G 81 -5.7 -4.77173 | overlap 4805464 4805466 CGCGTACAAAATAAA CTGACCG AGC CGGCCCG GCGTGATCGTGCCGG TERM 3920 4806416 - 4806460 + g 70 -8.6 -3.98683 | gap 1, overlap 4806422 4806424 CAGCGACAATCCGAT CGCCGAGGCCTTTGGTTCCAA CGCC TTGGATCCGGAGGTCT-GTCG TTTGCTTGCTGTCGT rpmE 4806721 - 4806948 + | 50S ribosomal protein L31 TERM 3921 4806967 - 4807003 + T 80 -14.6 -3.24747 | gap 1 CCCGGCCGGTTTTTG GAGCGGGATGACGCATC CTCG GAT-CATCATCCCGCTC TTGATCCTGTCGGCA TERM 3922 4807114 - 4807093 - T 100 -18.7 -3.75153 | opp_overlap 4807093 GCGCCGGAATCGAAA CGCCCCGCG ACTG CGCGGGGCG TTTTTCGTTGGCGAG TERM 3923 4807093 - 4807114 + T 100 -18.7 -4.8622 | opp_overlap 4807093 GCGCCGGAATCGAAA CGCCCCGCG ACTG CGCGGGGCG TTTTTCGTTGGCGAG RPD_4344 4807667 - 4807152 - | hypothetical protein TERM 3924 4807876 - 4807855 - R 100 -11.5 -6.02919 | opp_overlap 4807857, overlap 4807857 GCACAAACAAAAAAA GAGCCGCCG TTTC CGGCGGCTT TGAAGTTGATAACAG TERM 3925 4807857 - 4807874 + r 81 -14.1 -3.67976 | opp_overlap 4807855 4807857 ACAAACAAAAAAAGA GCCGCCG TTTC CGGCGGC TTTGAAGTTGATAAC TERM 3926 4807874 - 4807857 - R 100 -14.1 -4.6372 | opp_overlap 4807857, overlap 4807855 ACAAACAAAAAAAGA GCCGCCG TTTC CGGCGGC TTTGAAGTTGATAAC RPD_4345 4808315 - 4808124 - | hypothetical protein TERM 3927 4808153 - 4808165 + g 74 -10.5 -3.80573 | AACGATCGGCGGCTT CGCGC GTG GCGCG TTTCATCGTCATCGC TERM 3928 4808974 - 4808963 - g 74 -2.2 -4.7373 | gap 1 GGATCGCAGGAAAAA GC-GG ACG CCTGC CTCAAACTCGGCGCT RPD_4346 4808414 - 4809412 + | zinc-binding alcohol dehydrogenase TERM 3929 4811623 - 4811609 - g 71 -12.8 -3.31461 | CATCGACGTCTACAA GCCCGC GAT GCGGGC GCGGAAGTCCGACCG RPD_4347 4809546 - 4812422 + | GGDEF domain-containing protein RPD_4348 4813310 - 4812597 - | hypothetical protein RPD_4349 4813444 - 4814277 + | hypothetical protein RPD_4350 4815293 - 4814358 - | LysR family transcriptional regulator TERM 3930 4814434 - 4814403 - G 72 -8.6 -4.15044 | CCGTTCGGCAAGAAA CGCCGCCAGCAC CTCGACGC GCGCCGGCCGCG GCCCGCCGGGCGGCA TERM 3931 4815306 - 4815318 + H 71 -4.9 -4.40003 | opp_overlap 4815306, overlap 4815290 CATTATTGGAAACAA TGATT TTC AATCA TTTCTATTTCTGAAA RPD_4351 4815409 - 4816107 + | Pirin-like RPD_4352 4816276 - 4816875 + | TrpR binding protein WrbA TERM 3932 4816921 - 4816891 - T 81 -15.4 -3.01712 | TCGCGCCTCGCAACA CCCCGCCGCGAC CCGCGCT GTCGCGGCGGCG GTGACATCGTCACCG RPD_4353 4818751 - 4817225 - | hypothetical protein TERM 3933 4817384 - 4817370 - G 72 -11.4 -3.53343 | AACGCTTCTGCGAAA GTCGCG ACC CGCGAC GAGGTCTGACGGCGG RPD_4354 4819497 - 4818748 - | ABC transporter related TERM 3934 4819428 - 4819451 + g 74 -7.4 -4.25104 | gap 1, overlap 4819431 CGGCGAGGTCGAGCC GGT-CGACCGC GGG GCGGTCGTAAC TTTTCATCAACCCCC TERM 3935 4819631 - 4819601 - R 76 -12.7 -3.53343 | gap 1, opp_overlap 4819607, overlap 4819607 AATCTCCTCCGCAAA CGACAACGGCCTCC GCGA AGAGGCCGTT-TCG AACCTATTTGGCGGT TERM 3936 4819626 - 4819607 - R 73 -11.4 -3.60151 | opp_overlap 4819607, overlap 4819601 CTCCGCAAACGACAA CGGCCTCC GCGA AGAGGCCG TTTCGAACCTATTTG TERM 3937 4819607 - 4819626 + r 73 -10.7 -3.58329 | opp_overlap 4819607 4819601 CTCCGCAAACGACAA CGGCCTC CGCGAA GAGGCCG TTTCGAACCTATTTG RPD_4355 4819935 - 4819660 - | hypothetical protein RPD_4356 4820651 - 4820292 - | response regulator receiver RPD_4357 4820943 - 4821830 + | N-formylglutamate amidohydrolase TERM 3938 4821944 - 4821919 - f 100 -20.5 -5.79595 | GCTGAAAAGAAAAAA GGGCCGCTTGC GATG GCAAGCGGCCC AAGTCTAGGGAGGAA TERM 3939 4822088 - 4822065 - f 83 -5.2 -5.08824 | opp_overlap 4822083 4822086, overlap 4822066 4822074 TTCCCATGCAAAAAA CGCAGATCAG GCAC CGGATCCGCA CCGCGGGCGCATGAT TERM 3940 4822218 - 4822206 - f 82 -5.5 -4.88407 | overlap 4822211 4822214 GCAGGCAACCAAAAA GCGAA CCA CTCGC ATGGAGTATGCGAAA RPD_4358 4822372 - 4823154 + | histidinol-phosphate phosphatase, putative, inositol monophosphatase RPD_4359 4823763 - 4823173 - | regulatory protein, TetR RPD_4360 4823829 - 4824260 + | glyoxalase/bleomycin resistance protein/dioxygenase RPD_4361 4824275 - 4825060 + | hypothetical protein RPD_4362 4825702 - 4825067 - | lysine exporter protein LysE/YggA RPD_4363 4825899 - 4827308 + | lytic murein transglycosylase TERM 3941 4827450 - 4827438 - f 70 -10.5 -3.55761 | opp_overlap 4827437, overlap 4827396 GACTTACGCCGGAAA CCGCG GCG CGCGG GTGCCTTGACGATGC TERM 3942 4829123 - 4829104 - g 70 -10.6 -3.52073 | overlap 4829098 GCCGCAACAGCAGAA GCGCGTCG CCCG CGCCGCGC CGCCGCCTCCGGCCG RPD_4364 4827599 - 4829242 + | hypothetical protein RPD_4365 4830108 - 4829302 - | short-chain dehydrogenase/reductase SDR TERM 3943 4830121 - 4830148 + H 72 -13.4 -2.71712 | gap 1, overlap 4830120 CAAGCCTTGTCAATC GGCTGCGGACCGC GAC GCGGTCCGC-GCA ATTTCCGCAACAAGA RPD_4366 4830183 - 4830962 + | short-chain dehydrogenase/reductase SDR RPD_4367 4831744 - 4831034 - | ABC transporter related RPD_4368 4832499 - 4831741 - | ABC transporter related RPD_4369 4833532 - 4832492 - | inner-membrane translocator TERM 3944 4832949 - 4832897 - G 83 -14.6 -3.66803 | gap 1, opp_overlap 4832899 4832900 4832904, overlap 4832890 GCGGAAGATCGGAAA GCCGAGCGCGCGGGCGCGGCGCTCA TTGT CGCGCGCCGCGGC-GAGCGCGTGGC CGAACGGCGAGCGCA TERM 3945 4833224 - 4833181 - G 70 -13.1 -2.94695 | gap 2, overlap 4833179 4833176 CCATGATGAAGTAGA CGCCGCG--GGTGCGCAGCGC CAGC GCGCCGATCACCAGCGCGGCG AAGCTCGCGGCCAGC RPD_4370 4834404 - 4833532 - | inner-membrane translocator TERM 3946 4834507 - 4834546 + r 74 -9.3 -3.85704 | overlap 4834507 4834510 ATGGTCAGGGGATAT G-GATTCCGGGTCCGCGCC AAAA GGCGCGT-CCCGGAATGAC TTTGATAGTTAATGC TERM 3947 4834510 - 4834542 + r 78 -15.6 -2.69489 | gap 1, overlap 4834507 4834507 GTCAGGGGATATGGA TTCCGGGTCCGCGCC AAAA GGCGCGT-CCCGGAA TGACTTTGATAGTTA RPD_4371 4835795 - 4834587 - | twin-arginine translocation pathway signal RPD_4372 4836471 - 4836220 - | type IV pilus assembly PilZ RPD_4373 4837897 - 4836584 - | extracellular solute-binding protein TERM 3948 4837401 - 4837427 + g 74 -5.8 -4.57073 | gap 1 TCCGGCCAAGTGCCC GGCGGCGTCTC CGGATC GAGCC-CCGCC TTTTTGAACAGCGTC TERM 3949 4838531 - 4838581 + G 77 -7.5 -4.37658 | gap 2 CACCCGCGCCTCGAC CGATCCGAT-CCTG-TCGGGCTCGG TCG CCGAACTCGAGCGGGTGACGGAGCG TTTTCTCAACGGCTT RPD_4374 4838166 - 4840238 + | periplasmic sensor signal transduction histidine kinase RPD_4375 4840295 - 4841947 + | response regulator receiver sensor signal transduction histidine kinase RPD_4376 4841944 - 4842687 + | winged helix family two component transcriptional regulator TERM 3950 4842811 - 4842830 + F 80 -5 -4.84761 | CGAATGGCAGCATCC CAGTTTTG AAAT CACAACTG TTTTTGTCCGAATGT TERM 3951 4842842 - 4842872 + F 71 -9.1 -3.73068 | gap 1, overlap 4842840 4842843 ACTGTTTTTGTCCGA ATGTTTCGTCGGCG GCGC CGC-GACGAAACAA TTCTTGCCTTCACGA TERM 3952 4842843 - 4842871 + F 70 -12.6 -2.8352 | gap 1, overlap 4842842 4842840 CTGTTTTTGTCCGAA TGTTTCGTCGGCG GCGC CGC-GACGAAACA ATTCTTGCCTTCACG RPD_4377 4842988 - 4843599 + | RNA polymerase sigma factor TERM 3953 4843867 - 4843893 + F 100 -15.2 -4.55826 | GCAGGCCTCCAGCGA CCCGGACGGT ATGCCCC ACCGTCCGGG TTTTGCTGTTTTGCG TERM 3954 4844747 - 4844733 - g 73 -4.2 -4.57569 | TCATTTGCTGAAAAA CCCG CAGCAGT CGGG CGCACGGATGATGTT RPD_4378 4844098 - 4845504 + | cytochrome bd ubiquinol oxidase, subunit I RPD_4379 4845507 - 4846511 + | cytochrome d ubiquinol oxidase, subunit II TERM 3955 4846535 - 4846549 + G 73 -9.2 -3.90241 | TTTGAACCTTCCAGC CCGCTG TCG CGGCGG TTGTTGTGGTTCGTG RPD_4380 4846508 - 4846639 + | hypothetical protein RPD_4381 4846682 - 4847275 + | ErfK/YbiS/YcfS/YnhG RPD_4382 4847347 - 4848372 + | extracellular solute-binding protein RPD_4383 4849862 - 4848723 - | acyl-CoA dehydrogenase-like TERM 3956 4849776 - 4849833 + g 86 -7.6 -4.91084 | gap 2, overlap 4849764 4849749 4849778 GTCGCGCAGTTTGCG CA-GATGCGCGA-TCGGCGCCTTGTCGG CGAT CAGCCCGCGCGCCGAGTCGCGCAGCATG TTTTGTTCTTCGGTG RPD_4384 4851223 - 4850027 - | acyl-CoA dehydrogenase-like RPD_4385 4851400 - 4851945 + | hypothetical protein RPD_4386 4853321 - 4852104 - | major facilitator transporter TERM 3957 4852463 - 4852431 - G 79 -16.3 -2.90496 | overlap 4852428 4852433 4852445 CTGGCTCGCAAACGA GATCGCCGAGACCAG CCG CTGGTCGAGGCGATC GATCACGGTCGACAG TERM 3958 4852461 - 4852433 - G 70 -13.1 -3.00525 | overlap 4852431 4852428 4852445 GGCTCGCAAACGAGA TCGCCGAGACCAG CCG CTGGTCGAGGCGA TCGATCACGGTCGAC TERM 3959 4852542 - 4852520 - G 73 -14.8 -2.93723 | overlap 4852515 TCGTCAGCAACGACA CCGCGACCGC GGC GCGCTCGCGG CCGACCAGCGGATCG TERM 3960 4853166 - 4853140 - G 91 -9.4 -4.83243 | CCGAGATAAAAGAAA GTCGTCGCGG TGGCGAT CAGCGACGAC GGCCAGCCATGCAGG RPD_4387 4854645 - 4853425 - | major facilitator transporter RPD_4388 4855446 - 4854763 - | hypothetical protein TERM 3961 4855108 - 4855072 - G 75 -9.4 -4.09243 | opp_overlap 4855074, overlap 4855074 GACATTGGCGCAAAA CACCG-CGGCCAGCGGAC CGG GCCCGC-GACCGTCGGTC ATCTCGGCGCACCAC TERM 3962 4855106 - 4855074 - G 75 -12 -3.6422 | opp_overlap 4855074, overlap 4855072 CATTGGCGCAAAACA CCG-CGGCCAGCGGAC CGG GCCCGC-GACCGTCGG TCATCTCGGCGCACC RPD_4390 4855893 - 4858007 + | TonB-dependent receptor TERM 3963 4858040 - 4858071 + F 79 -8.7 -4.30576 | gap 1, opp_overlap 4858041, overlap 4858041 CACATCGTGCATGAC AGGCCCCGGCAGCA AAGGC TGTT-CCGGGGCCA TTTTCATGCTACACC TERM 3964 4858041 - 4858070 + F 70 -12.2 -3.18024 | gap 1, opp_overlap 4858041, overlap 4858040 ACATCGTGCATGACA GGCCCCGGCAGCA AAGGC TGTT-CCGGGGCC ATTTTCATGCTACAC RPD_4391 4858077 - 4858427 + | hypothetical protein TERM 3965 4858420 - 4858409 - f 76 -7.2 -4.30576 | overlap 4858370 4858410 4858411 GGCCGAGCAGCAAAA CGGC GGCC GCCG CACCTGACGCCTGCT TERM 3966 4858438 - 4858458 + F 72 -13.9 -2.69151 | overlap 4858436 CCTGACGCCTGCTGA GCCGGGCGC GTC GCGCCAGGC TGCTCTGTCCAAAAC RPD_4392 4858546 - 4858767 + | hypothetical protein TERM 3967 4859946 - 4859981 + G 90 -18.2 -3.5882 | gap 1 GCGCGACATGCTGGT GCGCGACGCCGCGCCGC CCG GCGGCGCAGGG-CGCGC TTTCGGAATCGTCTC RPD_4393 4858951 - 4860162 + | major facilitator transporter RPD_4394 4860342 - 4861562 + | extracellular ligand-binding receptor TERM 3968 4861606 - 4861632 + T 100 -18.1 -4.00756 | TCATCAGCACTTGCG TGATGGCCGGG CTCGT CCCGGCCATCA TTGTTTGATGAGCTG RPD_4395 4863181 - 4861877 - | major facilitator transporter RPD_4396 4863385 - 4864152 + | ABC transporter related TERM 3969 4864624 - 4864596 - g 74 -12.3 -3.59979 | CTTGCCGAGCTGAAA CTGTCCGAGGGCG CGA CGCCCGCGATCAG CAACGGCGGCAAGCT TERM 3970 4864646 - 4864628 - g 78 -16 -3.21099 | GCCCGCGATCAGCAA CGGCGGCA AGC TGCCGCCG CTGAAGCCGCAAGCC TERM 3971 4865337 - 4865351 + G 72 -8.5 -4.1347 | GCGCTCCTCGTGTTC GCCGC GGCAG GCGGC TTTCTGTGGTTCGGC RPD_4397 4864149 - 4866614 + | hypothetical protein RPD_4398 4866604 - 4867692 + | hypothetical protein RPD_4399 4867760 - 4868152 + | membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) TERM 3972 4868251 - 4868309 + T 90 -19.8 -2.78384 | gap 3, opp_overlap 4868217 AGAGGAGTGCCCTCA -C-C-CGGATCGCTGCGCAACCTCTCCCG CAAG CGGGAGAGGTTGCGCAGCGCTCGGCGCGA TCTGATCAAGACAAA TERM 3973 4868354 - 4868321 - T 86 -16.7 -3.14602 | opp_overlap 4868320 4868321 4868324, overlap 4868325 GCGATCTGATCAAGA CAAAGCCGACGCCCC TGTC GGAGCGCCGGCCTCG CTTTCAACCAATCCT TERM 3974 4868350 - 4868325 - T 100 -16.1 -4.23674 | opp_overlap 4868324 4868321 4868320, overlap 4868321 TCTGATCAAGACAAA GCCGACGCCCC TGTC GGAGCGCCGGC CTCGCTTTCAACCAA RPD_4400 4869571 - 4868378 - | putative branched chain amino acid periplasmic binding protein of ABC transporter TERM 3975 4869648 - 4869689 + r 91 -18 -3.13164 | overlap 4869651 GCGGATTTTTGCTGC GGATGCGTGACGGCGGCA GCATCG TGCCGCCGCCGCGCATCA TTGCCTAGTTCAGCG TERM 3976 4869651 - 4869686 + r 86 -18.3 -2.77235 | overlap 4869648 GATTTTTGCTGCGGA TGCGTGACGGCGGCA GCATCG TGCCGCCGCCGCGCA TCATTGCCTAGTTCA RPD_4401 4871373 - 4869694 - | OmpA-like transmembrane region TERM 3977 4870537 - 4870511 - G 83 -15.8 -3.53091 | overlap 4870530 AGGTCTTTCTGGAAA CGGCCGGAGCTG TAC CAGACCCGGCCG CCGACCTCGACTGCG TERM 3978 4871412 - 4871387 - R 79 -14.1 -3.48395 | opp_overlap 4871375 ATCGGGCTCACACAA TTGGTCGGCAC CAAG ATGCCGACCAA TCTGCGCGCCATGGA RPD_4402 4873349 - 4871463 - | heat shock protein 90 TERM 3979 4871681 - 4871698 + g 88 -7.7 -5.09426 | TGGTGGCGGCGCCCT TGTTGGC GCGG GCCAGCA TTTTTTCCAGTTCGC TERM 3980 4872998 - 4872963 - G 74 -12.5 -3.494 | opp_overlap 4872962 4872965 4872993, overlap 4872951 4872952 GAAGGCGGCATAGAA GCCGACGCCGAACTG GCCGAT CAGCCCGGCGCCGTC CTTGGCTTCGGTGAG RPD_4403 4875012 - 4873648 - | periplasmic sensor signal transduction histidine kinase TERM 3981 4874199 - 4874249 + g 70 -13.1 -3.02511 | GCGCGAGCTTGTCCT CGCCGCGC-TCGCGCAAGCCCGCGG CGT CGGCGGCCA-GCGCGGCGAGCGGCG TCTTCAGCCCGTGGG TERM 3982 4875000 - 4874961 - G 82 -15.7 -3.41051 | gap 1 TCAGCGCGATCAGAA TCGCCGCGGC-GCCGCCG GCGAT CAGCCGCAGCCGCAGCGA GTGGCGCGTCACCTG RPD_4404 4875674 - 4875009 - | winged helix family two component transcriptional regulator TERM 3983 4875412 - 4875385 - G 73 -9 -3.90744 | GGCTTCGGCAAATAA TCGTCGGCGCCG GCGT CGATGCCGTCGA CGCGCTCGGCCCAGC RPD_4405 4876057 - 4875674 - | peptidase TERM 3984 4876010 - 4875974 - G 72 -11.5 -3.53012 | overlap 4875975 GTGCTCGTGCGCAAA CGCGGGCACGGCGAT CGCCGGC ATCGCCGCGCCGGCC AGAGCGAGCCCGAGC TERM 3985 4876009 - 4875975 - G 72 -15 -2.71712 | overlap 4875974 TGCTCGTGCGCAAAC GCGGGCACGGCGAT CGCCGGC ATCGCCGCGCCGGC CAGAGCGAGCCCGAG RPD_4406 4876563 - 4876252 - | hypothetical protein mtnA 4877848 - 4876724 - | methylthioribose-1-phosphate isomerase RPD_4408 4878778 - 4877903 - | 5'-methylthioadenosine phosphorylase TERM 3986 4878524 - 4878479 - G 78 -14.7 -3.23395 | gap 1, opp_overlap 4878476, overlap 4878465 ATCGACCAGCACGAA GCTGCCGGGCGGCAGCTC-CTC CTT GAACGAGCCGCAGGCCGACAGC GAGATCAGGTCGGTG TERM 3987 4880135 - 4880102 - g 70 -13.1 -3.03159 | overlap 4880091 GCAATCCCCGCAAGA TCGACGGTCCCGCGC AGGT GCGCGAGATCCTCGA ACTCGCCGCCTGACC RPD_4409 4878895 - 4880148 + | iron-containing alcohol dehydrogenase RPD_4410 4880173 - 4881723 + | acyl-CoA synthetase RPD_4411 4882863 - 4881901 - | transposase, IS4 TERM 3988 4884768 - 4884717 - g 70 -12.9 -3.06696 | gap 2, opp_overlap 4884728 4884728 4884755 TGCTGCGCGAACAGA CCGGCGGCC-GACCGCCGCG-CGCG CGAT CGCGCCGCGGTGATCTGGTCGGCAG CGGAGCGGCGCGCGA RPD_4412 4883159 - 4885018 + | ATP-dependent DNA helicase RecQ TERM 3989 4885075 - 4885087 + F 70 -10.5 -3.65084 | ATGGCTTCAGGAGGC GCGGC GAT GCCGC TTTACGGATTTCATT TERM 3990 4885270 - 4885239 - g 86 -18 -3.14881 | gap 1, opp_overlap 4885238, overlap 4885228 4885223 CAAGGGCCTGATCAA GGCCGCCCGCGCGCA GGC CGCGCGCGAG-GGCC ATCTGTCGAATTTCA RPD_4413 4885081 - 4885308 + | hypothetical protein RPD_4414 4885615 - 4885334 - | hypothetical protein RPD_4415 4885955 - 4887538 + | AMP-dependent synthetase and ligase RPD_4416 4888666 - 4887560 - | metal-dependent phosphohydrolase RPD_4417 4888858 - 4889259 + | hypothetical protein TERM 3991 4889276 - 4889261 - T 78 -11.8 -3.73224 | GGATGTGGCAGTAAA CGCCGC AGCC GCGGCG ACGACGAATCCAGCG RPD_4418 4890115 - 4889453 - | polysaccharide export protein TERM 3992 4890237 - 4890210 - R 100 -17.8 -3.62096 | CCGCACCACGCGAAA GTCCCTCTCCCA CTTG CGGGAGAGGGAC GGGTTGGGGCGACGC RPD_4419 4890906 - 4890259 - | methionine sulfoxide reductase A TERM 3993 4890439 - 4890463 + g 70 -10 -3.65351 | gap 2, overlap 4890439 4890445 GAGTGCCTGCTGATA GG-CGCCG-CGC GAC GCGTCGGCGGCC TTTCGCTGCGCGTCG RPD_4420 4891395 - 4891078 - | hypothetical protein TERM 3994 4891451 - 4891413 - H 78 -14.6 -3.06183 | gap 1 TCCACCCCGATGGAA TTGACCGCCC-CCCGGC CGCTCT ACCGGGCGGGCGGACAA AACACAACCTCGCCA TERM 3995 4891590 - 4891621 + H 73 -8.6 -4.00042 | overlap 4891595 GCTTTATAAGGCCGG CAATGGCGGTGGGG TTAT CCCTGCCGCTGCTG TTCTTTGATGCGACG rpsT 4891771 - 4892037 + | 30S ribosomal protein S20