TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.343885 %AT, 4641091 nt, 43689 terms. Intergenic: 0.382231 %AT, H2T: 497193 nt, 5281 terms; T2T: 163811 nt, 3964 terms; H2H: 229461 nt, 4725 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|39933080|ref|NC_005296.1| Rhodopseudomonas palustris CGA009, complete genome (length 5459213) dnaA 679 - 2097 + | chromosomal replication initiation protein dnaN 2332 - 3450 + | DNA polymerase III subunit beta recF 3667 - 4833 + | recombination protein F TERM 1 4897 - 4852 - f 70 -10.3 -3.59262 | gap 1, opp_overlap 4854, overlap 4889 4890 GCTGAGACGCGCAAA GCCGGCCG-CTTGGCGGCAGTT TGC AGCGGCCGCCAAATCGGCCTTC GCGGGGCTTGCGAAG gyrB 5050 - 7491 + | DNA gyrase subunit B TERM 2 7529 - 7506 - T 71 -11 -3.50853 | opp_overlap 7501 7500 7514 GTTGGTGAACTAGAA CCGCTTGGTG TGAG CATCAAGCGG TGCCGCATTTCTTCT TERM 3 7544 - 7573 + T 80 -14.4 -3.12895 | gap 1, overlap 7543 7541 GTGCCGCATTTCTTC TGTGATGGCCGGG CTCGT CCCGGCCATC-CA TGTCTTCGTCGCGGC hpd 8791 - 7673 - | 4-hydroxyphenylpyruvate dioxygenase TERM 4 9070 - 9120 + G 72 -13.3 -3.15544 | gap 2 GACAACATCATCACT GGCTATCGCGCCGAGCTGTCCGGCG ACG CGCTGGGC--TTCGGCGTGGTCGCC TTCATCCAGATCACC RPA0006 8917 - 9396 + | AsnC family transcriptional regulator RPA0007 10893 - 9442 - | signal transduction histidine kinase TERM 5 10573 - 10557 - G 75 -9.3 -4.07568 | opp_overlap 10557 GGGCCTGCGCCAAAA GGCGCCG GAA CGCCGCC TGATTGGCCGGATCG kaiB 11174 - 10890 - | circadian clock protein kaiC 12875 - 11184 - | circadian clock protein KaiC RPA0010 13778 - 13269 - | glutamate uptake transcriptional regulator TERM 6 13969 - 13980 + r 83 -7.2 -4.59773 | overlap 13968 13967 CGAGGCTTCGAGATG GCGG ACCG CCGC TTTTTGCGCATCGCC RPA0011 14514 - 14266 - | hypothetical protein TERM 7 14343 - 14323 - G 77 -6.8 -4.46926 | overlap 14290 14332 14335 CAGCGCACGATAAAA CCGCGC AAACCAGCG GCGCGG CCAGGGCTGCGCCTG rdxS 14701 - 14516 - | cytochrome oxidase maturation protein rdxI 16890 - 14692 - | putative cation (heavy metal) transporting ATPase rdxH 17428 - 16925 - | FixH family protein fixG 18902 - 17445 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 8 18792 - 18753 - G 73 -3.6 -4.67904 | gap 1, opp_overlap 18757, overlap 18757 18759 CACGAACGGCAAAAA GTAATAGATCCCGA-GGCA GAC CGCCATCAGGATCCATTTG GTTCGCCGGAACGGG TERM 9 18995 - 18970 - R 74 -11.9 -3.46602 | opp_overlap 18970, overlap 18991 GCGCGCAGATCACAA CCTCGCGTGTC CCCC AACACACGAGG TTCTGCGCGCCCGCG ccoP 19900 - 19019 - | cytochrome c oxidase, cbb3-type, subunit III ccoQ 20072 - 19908 - | Cbb3-type cytochrome oxidase component TERM 10 20085 - 20096 + r 80 -5.8 -4.77036 | CATGTCGCCGCCTCA GCGA AGGT TCGC TTTTTCGTCGTACAG ccoO 20816 - 20082 - | cytochrome c oxidase, cbb3-type, subunit II TERM 11 20648 - 20682 + g 76 -8.6 -4.21908 | gap 1 TGTTGCGGCCTGCCA GTTCGAGCGGGGTGT AAGGAC GCACCCCG-TCGACC TTTTCGATCGTGCTC ccoN 22475 - 20829 - | cytochrome c oxidase, cbb3-type, subunit I TERM 12 22469 - 22485 + g 70 -2.3 -4.63218 | TCGAATTCAGGGCTT GATTCAT CTG ATCAATC TTTTCTTCGGCGGGC panE1 23706 - 22786 - | 2-dehydropantoate 2-reductase RPA0021 24516 - 23779 - | short-chain dehydrogenase/reductase SDR TERM 13 24646 - 24669 + r 71 -8.8 -3.90744 | overlap 24668 CAACGCTCAGCCGTA CAGCTCTTCG ACAT CGCGGAGCTG TTCTTTGCCGAAGAA RPA0022 25239 - 24637 - | DSBA oxidoreductase TERM 14 24716 - 24746 + g 70 -13.2 -3.04263 | opp_overlap 24687 24706 24707, overlap 24722 24723 AAGAAGGTCGGCGAG CCGAACGCGCCGCG CTG CACGGCGTCTTCGG TGTTGGCGATGAGCT gstA3 25362 - 26123 + | glutathione transferase TERM 15 26157 - 26198 + T 78 -14.5 -3.06183 | opp_overlap 26162 26166, overlap 26162 26166 GCGAGGAGCGCAGCG ACGAAGCAATCCAGCTCCG TGCA CACAGCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 16 26193 - 26162 - T 76 -13.8 -3.18582 | opp_overlap 26157 26162 26166, overlap 26166 GAGCGCAGCGACGAA GCAATCCAGCTCCG TGCA CACAGCTGGATTGC TTCGCTTCGCTCGCA TERM 17 26162 - 26193 + T 70 -11.6 -3.19192 | opp_overlap 26162 26166, overlap 26157 26166 GAGCGCAGCGACGAA GCAATCCAGCTCCG TGCA CACAGCTGGATTGC TTCGCTTCGCTCGCA RPA0024 27110 - 26235 - | short chain dehydrogenase ggt1 29118 - 27385 - | gamma-glutamyltransferase TERM 18 27585 - 27612 + g 71 -14.8 -2.50113 | gap 1, overlap 27584 GCCATTGATGGTGCA GCCGCGG-CGCCG CCA CGGCGTCCGCGAC GTTCATCCGGTAATC RPA0026 29224 - 30621 + | major facilitator transporter TERM 19 30799 - 30766 - f 79 -8.1 -4.30844 | opp_overlap 30768 30774 30783, overlap 30768 30774 ATTGCAGCATCAAAA TCCGAAAAGCCGCCA GACC TGGCGGCTTTTTCGT TTGAGCCGGCAGGTC TERM 20 30798 - 30768 - f 74 -14.9 -2.50493 | gap 1, opp_overlap 30768 30774 30783, overlap 30766 30774 TGCAGCATCAAAATC CGAAAA-GCCGCCA GACC TGGCGGCTTTTTCG TTTGAGCCGGCAGGT TERM 21 30768 - 30798 + F 83 -14.9 -3.53091 | gap 1, opp_overlap 30768 30766 30774, overlap 30774 30783 TGCAGCATCAAAATC CGAAAA-GCCGCCA GACC TGGCGGCTTTTTCG TTTGAGCCGGCAGGT TERM 22 30791 - 30774 - f 95 -12.7 -4.28651 | opp_overlap 30768 30774 30783, overlap 30768 30766 ATCAAAATCCGAAAA GCCGCCA GACC TGGCGGC TTTTTCGTTTGAGCC TERM 23 30774 - 30791 + F 100 -12.7 -4.98531 | opp_overlap 30774 30768 30766, overlap 30768 30783 ATCAAAATCCGAAAA GCCGCCA GACC TGGCGGC TTTTTCGTTTGAGCC TERM 24 30981 - 31016 + G 72 -13.3 -3.15056 | gap 1, opp_overlap 30984, overlap 30980 CATGCCATCCTGAAC GGAGCCGACGACCGGC TCCTC GTC-GTCGTCGGCCCC TGTTCGATTCACGAT aroG1 30837 - 31931 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 25 31978 - 31936 - T 95 -11.5 -4.56597 | gap 2, opp_overlap 31930 31938 31940, overlap 31940 CTGCGGCGTGAAAAA CGAA--GCGGGACAGCAAC GCGAACG GTCGCTGTCCCGCTATTCG TCGTCCTTTGTTAGT TERM 26 31938 - 31974 + T 72 -12.3 -3.26874 | opp_overlap 31936 31940, overlap 31930 31940 GCGGCGTGAAAAACG AAGCGGGACAGCAAC GCGAACG GTCGCTGTCCCGCTA TTCGTCGTCCTTTGT TERM 27 31972 - 31940 - T 100 -17.1 -3.80855 | opp_overlap 31938 31930 31940, overlap 31936 GGCGTGAAAAACGAA GCGGGACAGCAAC GCGAACG GTCGCTGTCCCGC TATTCGTCGTCCTTT TERM 28 31940 - 31972 + T 80 -14.9 -3.19138 | opp_overlap 31940 31936, overlap 31938 31930 GGCGTGAAAAACGAA GCGGGACAGCAAC GCGAACG GTCGCTGTCCCGC TATTCGTCGTCCTTT purH 33581 - 31989 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase RPA0029 35653 - 33767 - | heparinase II/III-like TERM 29 35350 - 35327 - G 70 -2.3 -4.64861 | GCCTGCGAAAACAAA GCGGCCG GCATAGATTT CGGCGGC GCGGGTCGCATCCGC TERM 30 35721 - 35711 - R 71 -5.4 -4.45664 | opp_overlap 35711 35709 TCAAGTTAACGAAAA TTCG TTG CGAA TCCTTTTAATCTGGA RPA0030 37172 - 35820 - | Sun/ nucleolar Nop1/Nop2 TERM 31 36627 - 36646 + g 71 -15 -2.62263 | overlap 36611 GGGTTCGTGGCTGAT CGCGTGCG CGAT CGCACGCG TGGTCTCGGCCCCGT RPA0031 37325 - 37543 + | hypothetical protein RPA0032 37629 - 38204 + | nuclease-like protein RPA0033 39092 - 38208 - | hypothetical protein TERM 32 40838 - 40819 - g 71 -9.2 -3.84185 | CGTACGCAAACAGAA GCCGCGGC GCGA ACCGCAGC GTCAGCGCGAGCAGC RPA0034 39440 - 40897 + | twin-arginine translocation pathway signal TERM 33 40896 - 40928 + T 71 -9 -3.75105 | overlap 40886 40883 CGTCGTGGTGGCGCT GAGCGGCCTCAGCC GCGCA GGCTGCCGCCGGTC TTCTTGGTGACTTCC pheT 43315 - 40904 - | phenylalanyl-tRNA synthetase subunit beta RPA0036 43939 - 43460 - | hypothetical protein TERM 34 43729 - 43742 + g 70 -2.3 -4.62069 | GCTGACCGCCATCGA GCTCG ACCA CCAGC TTTTTCGCGTGGCAG pheS 45282 - 44200 - | phenylalanyl-tRNA synthetase subunit alpha TERM 35 45329 - 45309 - R 74 -14.7 -2.6563 | opp_overlap 45306, overlap 45305 45306 CCCCTCAAGAAGTCA TGCCCGGGC TTG ACCCGGGCA TCCATCGCTTCTCGA rplT 45785 - 45426 - | 50S ribosomal protein L20 rpmI 46069 - 45869 - | 50S ribosomal protein L35 TERM 36 46111 - 46097 - R 86 -12.8 -4.09685 | TGCCACGCGCGAAAA GCGCCC CGG GGGCGC TCTGCGGCGGCGGAC TERM 37 46339 - 46375 + r 83 -17.4 -2.59564 | opp_overlap 46339 46345, overlap 46345 CCAAGAAAGCGCAAA GAAAAAGGCCCGTCAG ATTGG CTGGCGGGCCTTGTTC GTTCTGAAATCGAAA TERM 38 46375 - 46339 - R 90 -15.2 -3.76534 | opp_overlap 46339 46345, overlap 46345 CCAAGAAAGCGCAAA GAAAAAGGCCCGTCAG ATTGG CTGGCGGGCCTTGTTC GTTCTGAAATCGAAA TERM 39 46345 - 46369 + r 89 -15 -3.8591 | opp_overlap 46339 46345, overlap 46339 AAGCGCAAAGAAAAA GGCCCGTCAG ATTGG CTGGCGGGCC TTGTTCGTTCTGAAA TERM 40 46369 - 46345 - R 100 -12.8 -5.29846 | opp_overlap 46345 46339, overlap 46339 AAGCGCAAAGAAAAA GGCCCGTCAG ATTGG CTGGCGGGCC TTGTTCGTTCTGAAA infC 46981 - 46403 - | translation initiation factor IF-3 TERM 41 47231 - 47185 - H 90 -20 -2.78596 | overlap 47151 47150 CACCTTGGCACCACA CGCCGCCGCGTGAGGCGCCGGC ATT GACGGCGCCTCACGCGGTACTG CAAACCAACCCGGCA TERM 42 47931 - 47893 - g 80 -13.8 -3.75332 | overlap 47898 ATTCTGCAAGGCAAA CAGGACGAAGACGTGCCG TGG CGCCACGCCTTCGAGCTG GCTGAGCGGCTGCCG TERM 43 47926 - 47898 - g 76 -15.3 -2.87581 | overlap 47893 GCAAGGCAAACAGGA CGAAGACGTGCCG TGG CGCCACGCCTTCG AGCTGGCTGAGCGGC RPA0041 47263 - 48048 + | hypothetical protein RPA0042 49323 - 48211 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 44 48513 - 48556 + g 75 -11.6 -3.64703 | gap 1, opp_overlap 48542 CGTCGAGCCGCACCA GTTCGCCGAGCGCCGGTGCCC GCA GAGCATCG-CGCGCGGCCAGC TTTGCCTCGCGCCCC RPA0043 50060 - 49368 - | glutathione S-transferase uppP 50260 - 51066 + | undecaprenyl pyrophosphate phosphatase RPA0045 52081 - 51116 - | putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex RPA0046 52495 - 53109 + | 3'-5' exonuclease RPA0047 53339 - 54079 + | hypothetical protein RPA0048 54088 - 54753 + | OstA-like protein TERM 45 54846 - 54794 - f 86 -17.8 -2.73542 | overlap 54812 54814 GCGAATCTTGAACCA CGCG-GTCGCCGCATATAACAGCGGC AGC GCCGCGAGTA-ACGCGGCGACGCGCG TCACGGAACAGGTTC TERM 46 55081 - 55044 - g 83 -14.7 -3.72027 | gap 1, overlap 55045 ACGCCGCAGCAACAA CCGGCCGCGGCTGCGCCG CCG CGCCGC-GCCGCCGCCGT GCAACCAGCCGCGCC TERM 47 55080 - 55045 - g 86 -18.2 -2.82895 | gap 1, overlap 55044 CGCCGCAGCAACAAC CGGCCGCGGCTGCGCCG CCG CGCCGC-GCCGCCGCCG TGCAACCAGCCGCGC RPA0049 54870 - 55835 + | possible ABC transporter ATP-binding protein (in rpoN upstream) TERM 48 57223 - 57166 - g 73 -13.5 -3.29144 | gap 3 CGACTGCCTGCAGAA CGCCACC-T--GGCTGGTGCGCGCGCTC GATCA GCGCGCCCGCACCATCCTGAAGGTGGCG ACCGAGATCGTGCGT rpoN 56042 - 57688 + | RNA polymerase factor sigma-54 RPA0051 57746 - 58351 + | sigma 54 modulation protein/ribosomal protein S30EA ptsN1 58627 - 59088 + | PTS IIA-like nitrogen-regulatory protein PtsN TERM 49 59226 - 59210 - T 76 -11.5 -3.72893 | opp_overlap 59210 GACGTGCTCATTAAA CCCGCGC GTC GCGCAGG TTGATGACCTCGTCA TERM 50 59386 - 59342 - T 72 -11.6 -3.37975 | opp_overlap 59381 59383 59384, overlap 59381 ATTCAGCACCTACAA GACTTCATG-TTGAGGAGACGC GAA GCGCCTCCTCAACCATGC-GCC GCGGGGCGTCATTCC RPA0053 59957 - 59691 - | hypothetical protein RPA0054 60433 - 60008 - | heat shock protein Hsp20 ugpC 61678 - 60587 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 51 61449 - 61497 + g 72 -11.5 -3.61103 | opp_overlap 61441 61438 61436 AACACCATCGCGATA TCGCGATCGGCCGGCTCGACGTC GTT GACGACACGGCCGCCGATCTCGA TTTCGCCTGCGGTTA ugpE 62529 - 61681 - | binding-protein-dependent transport systems inner membrane component ugpA 63410 - 62529 - | binding-protein-dependent transport systems inner membrane component ugpB1 64903 - 63575 - | extracellular solute-binding protein, family 1 TERM 52 63721 - 63758 + g 76 -14.8 -3.17688 | overlap 63724 GCTGCACCATATTGC CGAGCCGCAGACCGCG CGAATT CTCGGTCGGCGGCTTG TTGGTCAGCTCCTTG TERM 53 63724 - 63755 + g 79 -12.9 -3.7282 | overlap 63721 GCACCATATTGCCGA GCCGCAGACCGCG CGAATT CTCGGTCGGCGGC TTGTTGGTCAGCTCC TERM 54 65096 - 65120 + r 86 -18.5 -2.79133 | opp_overlap 65073 65097 TAGCGGCCACGACCA ACGGCGCCGGC GCT GCCGGCGCCGC TGTGATCAGCGCTTG TERM 55 65119 - 65097 - R 100 -22 -3.21218 | opp_overlap 65096, overlap 65073 AGCGGCCACGACCAA CGGCGCCGGC GCT GCCGGCGCCG CTGTGATCAGCGCTT RPA0059 66331 - 65126 - | L-carnitine dehydratase/bile acid-inducible protein F RPA0060 67057 - 66656 - | hypothetical protein aroA 67198 - 68535 + | 3-phosphoshikimate 1-carboxyvinyltransferase RPA0062 69213 - 68539 - | hypothetical protein cmk 69377 - 70015 + | cytidylate kinase rpsA 70316 - 72013 + | 30S ribosomal protein S1 TERM 56 72062 - 72040 - f 88 -16.2 -3.29649 | opp_overlap 72040 ACCTCACGACATCAA GGGCTCCGGC ATT GCCGGGGCCC TTTTTCGTTGCGCGC TERM 57 72040 - 72062 + F 100 -18.4 -4.8622 | opp_overlap 72040 ACCTCACGACATCAA GGGCTCCGGC ATT GCCGGGGCCC TTTTTCGTTGCGCGC sppA 72242 - 73222 + | signal peptide peptidase SppA, 36K type ihfB 73388 - 73702 + | integration host factor subunit beta RPA0067 73740 - 74126 + | hypothetical protein TERM 58 74225 - 74204 - g 78 -10.1 -4.1585 | CCACAATTGTGAAAA TCTGCGGTC TGAC GACCGCCGA CACGCTGGAAGCAGC trpF 74185 - 74826 + | N-(5'-phosphoribosyl)anthranilate isomerase TERM 59 75173 - 75142 - g 70 -10.1 -3.6968 | overlap 75143 CCACAAGGTGAACAA CGTGCTCGGCCAG ATCATG CTGGCCAAGCGCA TGGGCAAGCCTCGGG trpB 74840 - 76054 + | tryptophan synthase subunit beta trpA 76054 - 76890 + | tryptophan synthase subunit alpha TERM 60 77330 - 77275 - g 82 -15.3 -3.39018 | overlap 77273 CGACGAGCGCAAATA CGCCGACCGCATCAAGGACGCCCGC ACCAAG ACCGGCGCCCATGACGCGGTACGCG TCGGCTTCGGCAAGC accD 77000 - 77983 + | acetyl-CoA carboxylase subunit beta folC 77980 - 79308 + | FolC bifunctional protein TERM 61 79388 - 79354 - T 71 -9.3 -3.74693 | gap 1, opp_overlap 79350 79354 79358 TGCGAGCGTAGCAAA GCAATCCAGTGCGCCG AGCA CGGGGG-CTGGATTGC TTCGTCGCTTCACTC TERM 62 79461 - 79429 - T 100 -15.6 -4.10657 | opp_overlap 79435 79454, overlap 79419 79430 CGAGAGGCCGGAAAA GCGAAACGGCCGGC GGAAT GCCGGCCGTTTCAG AACGTTCGTGGCGCG TERM 63 79460 - 79430 - T 91 -19.1 -3.06073 | opp_overlap 79435 79454, overlap 79419 79429 GAGAGGCCGGAAAAG CGAAACGGCCGGC GGAAT GCCGGCCGTTTCA GAACGTTCGTGGCGC TERM 64 79435 - 79455 + T 91 -16.1 -3.55801 | opp_overlap 79419 79430 79429, overlap 79454 GCCGGAAAAGCGAAA CGGCCGGCG GAA TGCCGGCCG TTTCAGAACGTTCGT trxA 79804 - 79484 - | thioredoxin RPA0074 83386 - 79901 - | UvrD/REP helicase TERM 65 80542 - 80589 + g 71 -9.7 -3.76402 | gap 2, opp_overlap 80540, overlap 80568 GGCGGCGCAACCAGT CCGGCAGCGGCGTGGCAACAGCC TCGT GGCTCG-GCACCGCCGC-GCCGG TTTCGTCGATCACAT TERM 66 81284 - 81315 + g 72 -13.8 -3.05384 | gap 1 CGCCCGTGCCGCGTA GGTCTCCAGCCGGTG CTG CAC-GGCTGCAGACC TTGGATCCCCCGCGG TERM 67 82429 - 82460 + g 100 -10 -4.77036 | opp_overlap 82398, overlap 82430 CTTCGCGCTGCAGCC TCTCGGCGAGGCCG GGCA CGCCGTCGCCGAGC TTTTTGGTGATCAGG TERM 68 82430 - 82459 + g 75 -13.5 -3.4574 | opp_overlap 82398, overlap 82429 TTCGCGCTGCAGCCT CTCGGCGAGGCCG GGCA CGCCGTCGCCGAG CTTTTTGGTGATCAG RPA0075 86532 - 83383 - | hypothetical protein TERM 69 85912 - 85932 + g 79 -16.1 -3.06915 | opp_overlap 85912, overlap 85898 85906 85893 CTCGGCATCGATCAA CCGGTCGCG CCG CGCGGCCGG TTCGATCCGGTCGGT TERM 70 85932 - 85912 - G 73 -13.9 -3.18264 | opp_overlap 85912 85898 85906 85893 CTCGGCATCGATCAA CCGGTCGCG CCG CGCGGCCGG TTCGATCCGGTCGGT RPA0076 87330 - 86608 - | nucleotidyl transferase TERM 71 87505 - 87515 + r 71 -8.2 -3.96068 | overlap 87474 AGGCGTTCTCGACTT GCGC CGC GCGC TTCTTCTTCCGGTCG RPA0077 87796 - 87488 - | hypothetical protein RPA0078 89420 - 87900 - | hypothetical protein RPA0079 91963 - 89417 - | sensor histidine kinase TERM 72 92045 - 92062 + r 76 -6.9 -4.40003 | opp_overlap 92020, overlap 92046 TGAACGGACTCGTGA CCGTCCG CAAA CGGACGA TTTATATTTCTCCGA dut 92608 - 92150 - | putative deoxyuridine 5'triphosphate nucleotidohydrolase coaBC 93951 - 92605 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase ubiB 95681 - 94104 - | 2-polyprenylphenol 6-hydroxylase TERM 73 94852 - 94833 - G 77 -5.6 -4.58395 | gap 1, overlap 94835 GTCAGCGTGGAAAAA GCCGTCGCG CAG CGCGT-GGC GCAGGAAGCTCTGGA TERM 74 95661 - 95637 - G 80 -14.9 -3.36273 | overlap 95617 95615 95638 GCGCGCGAACACGAA GGCGGCGCGGC CGA GCCGCGCCACA TGAGTGAGTGCTGCG TERM 75 95660 - 95638 - G 87 -18.4 -2.6155 | overlap 95615 95637 CGCGCGAACACGAAG GCGGCGCGGC CGA GCCGCGCCAC ATGAGTGAGTGCTGC ubiE 96439 - 95678 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 76 96511 - 96499 - H 71 -4.7 -4.49756 | overlap 96500 96501 CCCGAAACACGAAAA CGGCG GTC CGCGG CGGACCATATAGCGC TERM 77 97121 - 97097 - g 70 -9.9 -3.71873 | GCAGCGAGATCGAAA CCGAGCCCCAT CTG AAGGGCCTCGG CCCCGAGCCGCTCGG mutM 96685 - 97560 + | formamidopyrimidine-DNA glycosylase RPA0085 98931 - 97588 - | peptidoglycan-binding domain 1 TERM 78 99242 - 99274 + G 77 -15.6 -2.98823 | gap 1 CGCGGGTACTGGTGG TCGGCGCCGGCG-GC CTCG GCGCGCCGGTGCTGA TGTATCTGGCCGCGG moeB 99139 - 99939 + | putative molybdenum cofactor biosynthesis protein RPA0087 100064 - 101752 + | major facilitator transporter TERM 79 101841 - 101828 - T 93 -9.5 -4.71482 | overlap 101830 ACGAAACCTTAAAAA CGCGG GTGC CCGCG ACAAGCGCGCGGATG RPA0088 102101 - 101883 - | hypothetical protein RPA0089 102566 - 102225 - | hypothetical protein TERM 80 102769 - 102803 + r 72 -12.1 -3.33696 | gap 1, opp_overlap 102788 102789 CGTTGCCGATGTCGG TTCGAAGC-GCGCCGC CAAA GCGGCGCGGCGCCGAA TTAGTTGAAGCGCGC RPA0090 103208 - 102804 - | hypothetical protein RPA0091 103628 - 103287 - | hypothetical protein RPA0092 104444 - 104169 - | hypothetical protein TERM 81 104475 - 104492 + H 83 -4.9 -5.06414 | opp_overlap 104480 AACGTGGCTACGCGA CTAAACT AAAC GGTTTAG TTTTTATTGCAAGCC RPA0093 104575 - 105222 + | TetR family transcriptional regulator RPA0094 105219 - 106136 + | hypothetical protein TERM 82 106730 - 106679 - g 100 -19.5 -3.30441 | gap 3, overlap 106669 GAGCACCGCCGACAA CGCCCGCG-CG-GCGCAGC-GCACCG CCG CGGCGCAGCTCCGCTCGGCGCAGGCG CAATTGCGCCAGTCC RPA0095 106266 - 107411 + | putative multidrug efflux membrane fusion protein TERM 83 108099 - 108053 - g 73 -13.6 -3.30441 | gap 1 GATCAGCGCCCAGAA CGTGCAGGCGCCGGTCGGGCG GATCGG CGCGCGCCCGGTGCCCG-ACG ACCAGAAATTCCAGT TERM 84 109410 - 109441 + G 70 -10.1 -3.63805 | gap 1 CTGCCGTTCAACCTG CCGCCGGTCGTCGG CCTGT CC-ACTGCCGGCGG TTTCCAGTATCAGCT RPA0096 107415 - 110564 + | putative multidrug-efflux transport protein RPA0097 110707 - 111117 + | putative flagellar basal-body rod protein flgC TERM 85 111205 - 111227 + T 84 -16.2 -3.06183 | CGCGGAGCCTGTCAT CGGGCGGCGC TTC GCGCCGACCG TTGGCTCGCAATGAC oppF 112318 - 111260 - | oligopeptide ABC transporter ATP-binding protein TERM 86 111412 - 111365 - G 81 -12.6 -3.85698 | gap 1, overlap 111398 GGCGGCGTCGAGAAA GGGCAACTCTGCCCGGCAGCGCG CCT CG-GCAAACGGGCAGCGTTGCGC GAAGCGGCAGCCGGG oppD 113313 - 112315 - | putative oligopeptide ABC transporter ATP-binding protein TERM 87 112990 - 112963 - G 71 -15 -2.50074 | gap 1, overlap 112962 112958 112960 112965 CCGGTGATAATACAG CACC-TCGGCGAT CTG ATCGCCGACGGTG TAGAGCGGGTTCAGC oppC 114197 - 113316 - | putative ABC transporter permease protein oppB 115201 - 114221 - | putative dipeptide transport system permease protein 1 oppA 116831 - 115230 - | putative ABC transporter oligopeptide-binding protein RPA0103 117877 - 116921 - | cobalamin synthesis protein/P47K RPA0104 119517 - 117874 - | amidohydrolase TERM 88 121040 - 121053 + G 73 -3.8 -4.57569 | overlap 121012 TTGCTGCCGAAGCAT CTGC CGAGTT GCAG TTTTTCGCGCGGTCC RPA0105 119756 - 121297 + | transcriptional regulator RPA0106 122521 - 121313 - | branched chain amino-acid ABC transporter substrate-binding protein RPA0107 123581 - 122541 - | putative Zn-binding dehydrogenase TERM 89 122867 - 122853 - G 72 -4.9 -4.56597 | overlap 122854 122855 GGTCTGCTGCAAAAA GCCGG GGGCG CCGAC GCATTCGAACACGAT RPA0108 125359 - 123611 - | benzaldehyde lyase RPA0109 126188 - 125400 - | putative 3-oxoacyl-(acyl carrier ptn) reductase TERM 90 126231 - 126210 - H 72 -13.7 -2.71712 | gap 1, opp_overlap 126220, overlap 126209 GCGTCCTCCCGAAAT CCGC-GCCGC TTG GCGGCTGCGG TGTGACGTTGACCGC RPA0110 126389 - 127051 + | TetR family transcriptional regulator RPA0111 127892 - 127104 - | hypothetical protein TERM 91 127526 - 127497 - G 72 -12 -3.59979 | overlap 127498 CTTCTCGATCGCAAA GCCGCGGCCGAG CACGAC CACCGCCGCGGC CGTGATGGTCGCGAT TERM 92 127894 - 127925 + r 82 -10.9 -3.99374 | gap 1, overlap 127895 ATCAGCTCGTGCATC G-CCGTCGTCACCG CATAT CGATGACGACGGTC TTCTTCTTGGTGAAG TERM 93 127895 - 127923 + r 85 -14.6 -3.58505 | overlap 127894 TCAGCTCGTGCATCG CCGTCGTCACCG CATAT CGATGACGACGG TCTTCTTCTTGGTGA betB 129412 - 127901 - | putative betaine aldehyde dehydrogenase RPA0113 130028 - 131422 + | putative oxidoreductase TERM 94 131467 - 131491 + T 100 -20.1 -5.22039 | opp_overlap 131467 TGCGACCATGAAAAA TCCCGGCAGGT CCG ACCTGCCGGGA TTTTTTGAATTTCGG TERM 95 131491 - 131467 - T 100 -20.1 -4.77036 | opp_overlap 131467 TGCGACCATGAAAAA TCCCGGCAGGT CCG ACCTGCCGGGA TTTTTTGAATTTCGG RPA0114 131899 - 131546 - | hypothetical protein TERM 96 132542 - 132576 + H 70 -10.6 -3.62096 | opp_overlap 132542 CAGGCCCGCACCAGA TGGTCCGACCCCGCCT TCG AGGCGGAGTAGGGCGA TTTCGGCTGGTACGG rmlC 133329 - 133886 + | dTDP-6-deoxy-D-glucose-3,5-epimerase rmlD 133891 - 134784 + | putative dTDP-6-deoxy-L-mannose-dehydrogenase rmlA 134786 - 135661 + | glucose-1-phosphate thymidylyltransferase RPA0121 136107 - 136643 + | hypothetical protein TERM 97 138254 - 138233 - g 77 -7.9 -4.30576 | gap 1 GCGTGACGACGAAAA GGAC-GCCGC CAC GCGGCTGGCC GCCGCCATTGCCGAG TERM 98 138816 - 138794 - g 80 -15.6 -3.29144 | CTATGTGCGGGACAA CGGCATCGGC ATC GCCGATACCG ATCAGCAACTGGTCT phyB3 136734 - 139013 + | bacteriophytochrome PhyB TERM 99 139022 - 138999 - f 70 -11.8 -3.21747 | gap 1 GCACCCGACGAGGAA CGGCACGATGC GTA GCATCGT-CCG TCTCGGGCTCTCCCG TERM 100 139538 - 139516 - g 70 -9.8 -3.66178 | GGGCTGAACGGCAAA GCGCCGGC GCTGATT GCCGACGC TCGCTCACCGGAGAC RPA0123 139006 - 140646 + | KTN NAD-binding domain-containing protein RPA0124 141477 - 140653 - | 3',5'-cyclic-nucleotide phosphodiesterase, cpdA RPA0125 142298 - 141474 - | 3',5'-cyclic-nucleotide phosphodiesterase, cpdA TERM 101 142354 - 142313 - R 82 -10.8 -4.07568 | gap 1, opp_overlap 142313 142348 TGGCCCGCTCCAAAA CGTGACG-CGACGGAGCGC TGGAC GCGCTCCGTCGCCGGGAGG TTCTTCCGTTACTTG TERM 102 142313 - 142354 + r 76 -10.8 -3.75598 | gap 1, opp_overlap 142313, overlap 142348 TGGCCCGCTCCAAAA CGTGACG-CGACGGAGCGC TGGAC GCGCTCCGTCGCCGGGAGG TTCTTCCGTTACTTG RPA0126 143643 - 142363 - | sugar binding protein of ABC transporter RPA0127 144502 - 143666 - | putative permease protein of sugar ABC transporter TERM 103 143936 - 143897 - G 72 -7 -4.21194 | gap 1, overlap 143899 CGCCACCACCGAAAA GATGCCGAACGCGGTGACC GCA GGG-ATCGCGGTCGGCAGC ATCACCCGCCAAACG RPA0128 145458 - 144499 - | sugar ABC transporter permease RPA0129 146605 - 145451 - | putative sugar binding protein of ABC transporter RPA0130 146733 - 147611 + | LysR family transcriptional regulator RPA0131 148312 - 147617 - | ABC sulfate transport system, ATP-binding protein RPA0132 149082 - 148309 - | ABC sulfonate transport system, permease protein TERM 104 148379 - 148351 - G 73 -12.4 -3.39327 | gap 1 GCGCCACAGCCACAA CCGGCGCTGCAGC GGCT GCAGCA-CGCCGG CATCGACCACGATCA TERM 105 149114 - 149087 - R 71 -11.2 -3.48924 | gap 1 CTACCCCGCATAGAA CGCC-GCGTCCGG CAG CCGGCCGCCGACG ATGCCGGGATCGAGC RPA0133 150064 - 149072 - | ABC sulfate transport system, periplasmic binding protein hydC 151939 - 150080 - | hydrogenase gamma-fused hydrogenase large and small subunit RPA0135 153960 - 151939 - | oxidoreductase TERM 106 152331 - 152310 - G 74 -5.7 -4.56597 | overlap 152294 CGCCGCCGGCAAAAA CTCCCGGCC GCGA GGTCGCGAG CACCCGATCGGTCGC RPA0136 155809 - 154100 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 107 155266 - 155246 - G 71 -12.5 -3.27215 | opp_overlap 155263, overlap 155234 AAACGCCGACATCAA CTCGCCGCC GGA GGCGCCGAG CTGCGGCCGGTAGCG cheB1 156905 - 155814 - | chemotaxis methylesterase, CheB1 cheR1 157768 - 156926 - | chemotaxis methyltransferase, CheR1 TERM 108 157885 - 157860 - R 83 -14.8 -3.53012 | opp_overlap 157858 157855 GCCGGCGTTTCGAAA GTGAACGCCC GATCGG GGGCGTTCAC CGGTGTTGCGTTTGG RPA0139 160131 - 157930 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 109 160218 - 160183 - R 72 -11.9 -3.27902 | gap 2, opp_overlap 160186, overlap 160171 160181 160179 TCACGCAACAACAGA TCG--CGACCGGGCGGC TCAA GCCGCCAGGTCGTTCGA TGGGGTCTCGGCGGC TERM 110 160186 - 160213 + r 90 -18.4 -3.07443 | opp_overlap 160171 160183 160181 160179 CGCAACAACAGATCG CGACCGGGCGGC TCAA GCCGCCAGGTCG TTCGATGGGGTCTCG cheW1-3 160686 - 160198 - | chemotaxis signal transduction/oligomerization protein CheW1-2 TERM 111 160425 - 160402 - G 72 -13.8 -2.9914 | overlap 160414 GACTTCGTAGACACA GTCGGCGACG AAGC CGACGCCGAC GACGCGGCCGGCGAC cheW1-1 161217 - 160747 - | chemotaxis signal transduction/oligomerization protein CheW1-1 cheA1 163283 - 161217 - | chemotaxis histidine kinase CheA cheY1 163645 - 163280 - | response regulator receiver, CheY1 RPA0144 163968 - 163645 - | sulfate transporter TERM 112 165320 - 165289 - g 76 -15.2 -3.08133 | gap 1 CACGGAGCGATTGAA GCTGCAGCAGACGCA CGA CGCGCC-GCTGCAGC CATCACTCCCCCCGG RPA0145 164246 - 165412 + | metal dependent phosphohydrolase domain-containing protein TERM 113 165453 - 165508 + G 80 -15.5 -3.29461 | gap 3, opp_overlap 165450 CAGGCCGAACGACCA TGTCGCC-TCGGCAGCAGGGCGAA-GCG GAT CGTGTTCGCCCGGCGGCCGGCGGCG-CA TTCTGGACAGGATTG RPA0146 165452 - 165883 + | hypothetical protein RPA0147 166752 - 165961 - | ModE family transcriptional regulator TERM 114 166155 - 166204 + g 78 -15.8 -3.14132 | opp_overlap 166150 166149 CGCGAAACACGTTGC GGCGCAGCTTCG-ACGCCTCGTCG GGCG TGACGAGGCGCACGAA-CGGCGCC TTGATCAGCGCAAGC RPA0148 167409 - 166873 - | hypothetical protein RPA0149 168227 - 167433 - | iron ABC transporter ATP-binding protein RPA0150 169246 - 168224 - | iron ABC transporter permease TERM 115 168780 - 168751 - G 79 -13.5 -3.68351 | TCTTCACCAGCGAAA TCGCCGCCGCCGC GAGC GCGCCGACGACGA TGCCGGACAGCACCA TERM 116 169263 - 169301 + r 70 -11.6 -3.14132 | opp_overlap 169260 169259 TCAGCGACAAAGCCC TTCGAGGAGCGGGTCG AGATCGC CGTCCCGCACCTCGAC TTGGTAGAACAGGCG RPA0151 170297 - 169248 - | iron ABC transporter periplasmic binding protein TERM 117 170154 - 170127 - G 72 -6.8 -4.18367 | opp_overlap 170140 170143, overlap 170121 170129 GACCACATAGAGAAA GATCCCGGCGGG CGGA CCCGCGGCGAAC ACGCGGGTAATGTAG RPA0152 170797 - 170294 - | hypothetical protein TERM 118 171360 - 171389 + H 95 -10.5 -4.4261 | opp_overlap 171349 171357, overlap 171361 CACACGACATCATTG TCGCCACCGGCCG ACCA CGGCCTGCGGCGC TTTTCGTCTTCCGAC TERM 119 171361 - 171388 + H 76 -14 -3.25084 | opp_overlap 171349 171357, overlap 171360 ACACGACATCATTGT CGCCACCGGCCG ACCA CGGCCTGCGGCG CTTTTCGTCTTCCGA TERM 120 171921 - 171911 - g 86 -8.2 -4.72272 | overlap 171912 CCTCGTGACGAAAAA GCCG GTA CGGC CGATCGAAGGCGAGT RPA0153 171435 - 173618 + | outer membrane receptor for Fe transport TERM 121 173661 - 173636 - f 93 -20.5 -3.06133 | GAATGGCGGACGCAA GCAGGCCCCGT CGAG ACGGGGCCTGC GACGGAGAATTCGAT RPA0154 173675 - 174313 + | MotA/TolQ/ExbB proton channel family protein RPA0155 174326 - 174793 + | putative tolR/exbD protein TERM 122 175562 - 175535 - g 75 -6.8 -4.30844 | opp_overlap 175541 175556, overlap 175537 ATTCGATGATGAAAA CCGCCCGGCCGC CGCC ACCGCCCGACGG CCTATTCCGCGGTCA RPA0156 174790 - 175608 + | tonB like protein RPA0157 177126 - 175963 - | hypothetical protein TERM 123 176269 - 176292 + g 73 -3.7 -4.68593 | overlap 176271 CTTGCTGCTCTCCCA GTTGCCCGG CAGGTT CTGGGCGCC TTTTTCGATGCTGCC TERM 124 177266 - 177298 + H 100 -10.4 -4.82901 | opp_overlap 177244 177266, overlap 177269 177270 GGCGGGTATAAGTCA CGCACCGGCGCGGG CAGGT CTCGCGCCGGATTG TTTTTGTGCGGCCAG TERM 125 177269 - 177295 + H 100 -12.9 -4.52873 | opp_overlap 177244 177266, overlap 177266 177270 GGGTATAAGTCACGC ACCGGCGCGGG CAGGT CTCGCGCCGGA TTGTTTTTGTGCGGC TERM 126 177270 - 177294 + H 88 -16.4 -3.31001 | opp_overlap 177244 177266, overlap 177269 177266 GGTATAAGTCACGCA CCGGCGCGGG CAGGT CTCGCGCCGG ATTGTTTTTGTGCGG TERM 127 177424 - 177398 - H 100 -11.5 -4.7497 | gap 1, overlap 177399 TCGACTGACCAAAAA GCCGGCC-CGGG TTAA CCCGAGGCCGGG TTCGAACACGAAGGA TERM 128 177423 - 177399 - H 83 -15 -3.445 | gap 1, overlap 177398 CGACTGACCAAAAAG CCGGCC-CGGG TTAA CCCGAGGCCGG GTTCGAACACGAAGG TERM 129 177477 - 177467 - g 76 -8.2 -4.2828 | TCGCAGTCATCAAAA CCGG CGG CCGG CAATACCGTGTCGTT rplU 177448 - 177828 + | 50S ribosomal protein L21 rpmA 177918 - 178190 + | 50S ribosomal protein L27 TERM 130 178243 - 178205 - f 80 -5.4 -4.83615 | opp_overlap 178190, overlap 178192 178207 GACGGTGGACAAAAA TATGTG-TCCGCCGGGTC CTGTC AAACCGGCGGAGCACA-A CTAAGGGCTCCAGGG TERM 131 178242 - 178207 - f 78 -10.5 -4.03995 | gap 1, opp_overlap 178190, overlap 178192 178205 CGGTGGACAAAAATA TGTG-TCCGCCGGGTC CTGTC AAACCGGCGGAGCACA ACTAAGGGCTCCAGG TERM 132 178256 - 178281 + F 100 -16.1 -5.30616 | opp_overlap 178249 178248 CAACTAAGGGCTCCA GGGGAGGCGGG AAAA CCGGCCTCCCC TTTTTCTTTGCGTAC TERM 133 178908 - 178897 - g 74 -5.8 -4.56597 | overlap 178898 GTCGTCGCTGAAAAA GTGG GGCA CCAC CAAGCGGCGGTGCTG RPA0160 178325 - 178924 + | GCN5-related N-acetyltransferase TERM 134 178959 - 178986 + T 91 -15.6 -3.90922 | opp_overlap 178957 178961, overlap 178961 TCATTGAAGTGAACG GATCGGCCGGGT TGTG ACCCGGCCGATG TTGTTTCGAGACAGT TERM 135 178984 - 178961 - T 86 -18.2 -2.57192 | opp_overlap 178959 178961, overlap 178957 ATTGAAGTGAACGGA TCGGCCGGGT TGTG ACCCGGCCGA TGTTGTTTCGAGACA TERM 136 178961 - 178984 + T 100 -18.2 -3.54488 | opp_overlap 178961 178957, overlap 178959 ATTGAAGTGAACGGA TCGGCCGGGT TGTG ACCCGGCCGA TGTTGTTTCGAGACA RPA0161 180536 - 179631 - | DMT family permease TERM 137 179714 - 179684 - G 75 -9.7 -4.09108 | gap 1 GCCAACCGAGATAAA GCCCG-GCCGCGAT GATG ATCGCGACGCCGGC CACCGTCGCCCGCGA TERM 138 180492 - 180447 - G 100 -13.9 -4.4078 | GTCGGCGAACGAAAA CGCCAGCATCGCCAGCAGCAT CAGC AGGATGCCGGCGATCCGGGCG GTGCGCGGGTCGGAC TERM 139 181359 - 181342 - g 72 -14.1 -3.05384 | opp_overlap 181351 CCCGGCCTGATCGAA GGCGCCC ATGA GGGCGCC GGCCTCGGTGACCGC obgE 180688 - 181749 + | GTPase ObgE TERM 140 182323 - 182313 - g 77 -6.8 -4.45544 | overlap 182318 GGTGATCAACGAAAA CGAC ACC GTCG CCACCACCGAGATTC proB 181888 - 183018 + | gamma-glutamyl kinase proA 183222 - 184514 + | gamma-glutamyl phosphate reductase nadD 184539 - 185168 + | nicotinic acid mononucleotide adenylyltransferase RPA0166 185539 - 185835 + | Iojap-related protein TERM 141 185888 - 185933 + F 70 -11.8 -3.22774 | gap 1, overlap 185890 GCGTGTCTGACGGAT GAGTAGCG-CGGCTCTCGCGC AAAGG GCGCGTGAGCCGATGCGACTA TTGATCCTGGCTGTC TERM 142 185890 - 185931 + F 80 -14.4 -3.17527 | gap 1, overlap 185888 GTGTCTGACGGATGA GTAGCG-CGGCTCTCGCGC AAAGG GCGCGTGAGCCGATGCGAC TATTGATCCTGGCTG TERM 143 186090 - 186064 - g 72 -11.4 -3.59627 | overlap 186055 186065 ATGAAATTGCCGAAA GCCGCGCCCGCG AGG CGCCGGCACGGA TGGCGGAAGAAGCCG TERM 144 186089 - 186065 - g 72 -14.9 -2.75294 | overlap 186064 186055 TGAAATTGCCGAAAG CCGCGCCCGCG AGG CGCCGGCACGG ATGGCGGAAGAAGCC RPA0167 185925 - 186407 + | hypothetical protein RPA0168 186427 - 187818 + | peptidase M23B ctpA 187815 - 189191 + | carboxyl-terminal protease TERM 145 189245 - 189226 - f 91 -16.4 -3.54543 | opp_overlap 189226 ATGTATTTGCTGAAA GGGCGGCC GGTG GGCCGCCC TTTTTGCTGCGCGGT TERM 146 189226 - 189245 + F 100 -16.4 -4.7254 | opp_overlap 189226 ATGTATTTGCTGAAA GGGCGGCC GGTG GGCCGCCC TTTTTGCTGCGCGGT RPA0170 189342 - 190580 + | hypothetical protein invA1 190619 - 191125 + | dinucleoside polyphosphate hydrolase RPA0172 192332 - 191262 - | hypothetical protein TERM 147 192420 - 192452 + H 70 -10.6 -3.5774 | gap 2, overlap 192447 GGTCGTCGCCTTGGG CCGGCCGATCGCCGCT GGC AGCAGCGA--GGCCGG TTTCGGCGCTTGCCT TERM 148 192528 - 192504 - H 76 -9.2 -4.08692 | gap 1, opp_overlap 192494 192501 192504, overlap 192492 CAATGCGGCGGAAAA CGGCCG-CCGC GACC GCGTTCGGCCG TCCGTTTCGAGCCAA RPA0173 192604 - 193551 + | putative sugar nucleotide dehydratase TERM 149 193791 - 193775 - g 73 -13.7 -3.14344 | overlap 193762 GACCGGCGTGACCAA CGCCGAG ATG CTCGGCG AGACCGACTGGGTCA invA2 193548 - 194069 + | dinucleoside polyphosphate hydrolase TERM 150 194069 - 194079 + T 77 -2.4 -5.00616 | overlap 194051 194050 CGCTGCTCAGGCTTA GCCG CGG CGCC TTTTTTCACCACGCA TERM 151 194228 - 194197 - T 91 -12.3 -4.25848 | overlap 194198 194202 AACGTCGCATCAAAA GCAAATGGCCGGG ACGATG CCCGGCCATTCGA AACGTCAGAACACCT TERM 152 194227 - 194198 - T 83 -15.8 -3.15027 | overlap 194197 194202 ACGTCGCATCAAAAG CAAATGGCCGGG ACGATG CCCGGCCATTCG AAACGTCAGAACACC TERM 153 194223 - 194202 - T 89 -13 -4.23781 | overlap 194198 194197 CGCATCAAAAGCAAA TGGCCGGG ACGATG CCCGGCCA TTCGAAACGTCAGAA atpC 194660 - 194253 - | F0F1 ATP synthase subunit epsilon atpD 196204 - 194774 - | F0F1 ATP synthase subunit beta TERM 154 196272 - 196311 + r 70 -7.2 -4.03141 | gap 1, overlap 196273 GTAAACCTGTGTAAC GTCGTC-AGATCGCCTCGG CGC CCGAGATGATCTCGATGAG TTCTTTGGTGATCAT atpG 197151 - 196276 - | F0F1 ATP synthase subunit gamma atpA 198827 - 197295 - | F0F1 ATP synthase subunit alpha atpH 199387 - 198827 - | F0F1 ATP synthase subunit delta TERM 155 199353 - 199335 - G 76 -6.6 -4.44046 | overlap 199336 199350 GCCAGTTCAAACAAA GCGGTCGC GTA ACGACCGG AGACTCCGGAAACCG TERM 156 199438 - 199427 - H 84 -2.2 -5.26875 | overlap 199412 199428 199429 TGGCCAAGGAAAAAA CCGT CGCC ACGA AGCGGCGCCCCCGAT TERM 157 200150 - 200107 - g 93 -9.4 -4.86731 | gap 1, opp_overlap 200111 200137 200138 TGGTTCGAAAGAAAA CACCGGCGCTGCTCACCACCG GGC CGGCTGCG-GCTGCGGCGATG ATCGTCGCCTCTGTC rlpA1 200091 - 200561 + | rare lipoprotein A TERM 158 200655 - 200690 + T 100 -16.2 -4.11216 | opp_overlap 200660, overlap 200660 TCTGACGTCACGTGA CAAAAGCCTGCCGCCG ATTG CAGCGGCAGGCTTTTC TTTTGCGCGTCAGCC TERM 159 200685 - 200660 - T 100 -18.3 -4.4009 | opp_overlap 200655 200660 CGTCACGTGACAAAA GCCTGCCGCCG ATTG CAGCGGCAGGC TTTTCTTTTGCGCGT TERM 160 200660 - 200685 + T 100 -16.1 -5.08255 | opp_overlap 200660, overlap 200655 CGTCACGTGACAAAA GCCTGCCGCCG ATTG CAGCGGCAGGC TTTTCTTTTGCGCGT priA 202927 - 200717 - | primosome assembly protein PriA TERM 161 202031 - 201989 - G 81 -11.9 -3.97368 | gap 1, overlap 201992 GGCGTAAGGCAGAAA CAGCGACGA-GCGCGCGCCG ACCA CGACGCGGGCTTCGCCGGCG GCGATCGAAGCCCAG TERM 162 203524 - 203513 - g 95 -2.2 -5.63374 | CGAAGATCAAAAAAA GCCT GCCG AAGC CGCTGCCAATCGCGG xerC 202981 - 204096 + | site-specific tyrosine recombinase XerC RPA0183 204237 - 204827 + | hypothetical protein TERM 163 204869 - 204841 - T 100 -18.9 -4.91084 | GAGCCAAGAAGAAAA TCGCGCGGACCGA GCC TCGGTTCGCGCGA TGAACGATCCCAATC RPA0184 205433 - 204891 - | hypothetical protein dldH 206876 - 205473 - | dihydrolipoamide dehydrogenase TERM 164 206759 - 206772 + g 82 -5.9 -4.82901 | opp_overlap 206755, overlap 206755 CGTTGAGGCAAGTCC CGCCG AGCG TGGCG TTTTTCTCGACCACC RPA0186 207654 - 206908 - | short-chain dehydrogenase/reductase SDR RPA0187 208111 - 207662 - | hypothetical protein sucB 209376 - 208123 - | dihydrolipoamide acetyltransferase TERM 165 209479 - 209447 - R 80 -6 -4.78764 | opp_overlap 209473, overlap 209452 CAAACTCAGGAAAAA CCGAAGGGCCGCCG TCAGG CGGCGGCCCGATGC GTCAACGCAACGCTT TERM 166 209474 - 209452 - R 95 -17.7 -3.47218 | opp_overlap 209473, overlap 209447 TCAGGAAAAACCGAA GGGCCGCCG TCAGG CGGCGGCCC GATGCGTCAACGCAA kgd 212438 - 209481 - | alpha-ketoglutarate decarboxylase TERM 167 212137 - 212165 + g 77 -5.2 -4.68506 | gap 1, opp_overlap 212117, overlap 212119 212117 ACGCCGCGGCTCTGA GCC-TTGGCCTGG ATCT TCTGGCCGACGGC TTTTTCGACTTGGTT TERM 168 212502 - 212480 - R 93 -17.8 -3.3344 | ACTTAATCGCGATAA GCTGATCCGG TTA CCGGATCAGC AACATAGTGCACCTT sucD 213450 - 212566 - | succinyl-CoA synthetase, alpha subunit sucC 214711 - 213515 - | succinyl-CoA synthetase subunit beta mdh 215775 - 214807 - | malate dehydrogenase RPA0193 217105 - 215921 - | AFG1-like ATPase RPA0194 217727 - 217188 - | 2',5' RNA ligase tesA 218601 - 217933 - | putative acyl-CoA thioesterase precursor RPA0196 218627 - 219370 + | ABC transporter ATP-binding protein RPA0197 219374 - 221944 + | hypothetical protein RPA0198 222285 - 223076 + | acetate transporter TERM 169 223126 - 223106 - f 81 -15.4 -3.07935 | opp_overlap 223106 ACCTGACGGATCGAA GCCCCGGC CCAGT GCCGGGGC TTTTGTTTTTGGGCA TERM 170 223106 - 223126 + F 100 -15.4 -5.26119 | opp_overlap 223106 ACCTGACGGATCGAA GCCCCGGC CCAGT GCCGGGGC TTTTGTTTTTGGGCA RPA0199 223231 - 223761 + | GCN5-related N-acetyltransferase RPA0200 224189 - 223821 - | hypothetical protein TERM 171 224471 - 224490 + r 100 -7.8 -5.79595 | CTCGATCCCCCTCCT GGGCCGAC GCAA GTTGGTCC TTTTTTGTTTTAAGG TERM 172 224615 - 224635 + r 73 -8.1 -4.09685 | AGCGACGTGAAGGCG GCCCCGAGC ATC GCACCGGGC TTTTCGCGGCTACCG RPA0201 225468 - 224593 - | hypothetical protein TERM 173 224917 - 224968 + g 72 -13.6 -3.16191 | overlap 224929 GATTTCTTTGCCCTC GACCGCCACCGAGACCGGCACGGT CATG ACCCCGTCGGTCTTGTCGGTGGTC TTGATCGCGCTGTCG TERM 174 225451 - 225429 - G 100 -11.2 -4.67038 | opp_overlap 225429 GCCTTAAAACGAAAA GGCGGCCCTT TGC ATAGGCCGCC TTCCGTTCACCTGCC TERM 175 225525 - 225508 - R 71 -12.7 -3.03124 | GCCTATCGGCGAAGA TCGCGGC TCAG GCCGCGA GCTTGCGCAGCACGT acnA 228232 - 225515 - | aconitate hydratase cycV 228448 - 229050 + | cytochrome c biogenesis protein CcmA cycW 229047 - 229715 + | heme exporter protein CcmB TERM 176 230084 - 230103 + G 88 -16.4 -3.67976 | opp_overlap 230082 GTCGCGGCCAAGACC GCGGCGCC GATC GGCGCCGC TTTCACCTTCCTCGC TERM 177 230401 - 230431 + G 74 -7.5 -4.24326 | GCTCGACAAGGCGTT CCTGATCCCGCTG CTGGT CACCGCGATCGGG TTTTCACTGCTGTTT cycZ 229808 - 230542 + | heme exporter protein CcmC cycY 230732 - 231328 + | periplasmic protein thiol RPA0207 231468 - 231866 + | hypothetical protein ispZ 232616 - 231999 - | intracellular septation protein A ftsY 233560 - 232613 - | signal recognition particle-docking protein FtsY RPA0210 233589 - 234563 + | pseudouridine synthase:pseudouridine synthase, Rlu TERM 178 234743 - 234731 - f 74 -9.1 -3.9461 | overlap 234733 TTGCCTTAACAACAA CAGCC GGA GGCTG AGACGATCGCACGTC TERM 179 234894 - 234909 + F 90 -8.2 -4.82901 | overlap 234887 234895 AGCACCGACGGCGGG TGCGGC ATCG GCCGCG TTTTTGTGGAGGAAC RPA0211 234927 - 236879 + | acetate--CoA ligase TERM 180 236919 - 236947 + F 100 -23.9 -3.07962 | overlap 236917 236920 236921 GCTGCCCTCTCCAGA GGCCCCGCCTGTG ATT CGCAGGCGGGGCC TCTTCGCGTCTGGCG RPA0212 237262 - 237789 + | ErfK/YbiS/YcfS/YnhG TERM 181 237841 - 237812 - T 81 -15.1 -3.04517 | opp_overlap 237817, overlap 237817 AGCGCGGTCTAAAAG GAAAAGCCGCGGA CGGA TCCGCGGCTTTTT TGTTACGTGAGATCG TERM 182 237817 - 237836 + T 100 -15 -5.4833 | opp_overlap 237817 237812 GGTCTAAAAGGAAAA GCCGCGGA CGGA TCCGCGGC TTTTTTGTTACGTGA TERM 183 237836 - 237817 - T 100 -15 -4.67038 | opp_overlap 237817, overlap 237812 GGTCTAAAAGGAAAA GCCGCGGA CGGA TCCGCGGC TTTTTTGTTACGTGA RPA0213 239933 - 237864 - | OmpA family protein TERM 184 240092 - 240060 - R 100 -14.8 -4.21773 | opp_overlap 240060 240063 GCCGAAGAGAAATAA TTCCGCCGCGTCCG GGCTT CGGACGCGGCGTCA TTCATCACAAGTTCA TERM 185 240060 - 240092 + r 83 -15.5 -3.15579 | opp_overlap 240060, overlap 240063 GCCGAAGAGAAATAA TTCCGCCGCGTCCGG GCT TCGGACGCGGCGTCA TTCATCACAAGTTCA TERM 186 240063 - 240089 + r 100 -21.6 -2.78018 | opp_overlap 240060, overlap 240060 GAAGAGAAATAATTC CGCCGCGTCCGG GCT TCGGACGCGGCG TCATTCATCACAAGT RPA0214 240436 - 240179 - | hypothetical protein RPA0215 240924 - 240436 - | general stress protein 26 TERM 187 241136 - 241115 - R 100 -18.7 -5.13722 | opp_overlap 241115 241097 GTGACCAAAACAAAA CGGCCGGGC GAAA GCCCGGCCG TTGGTATCAGCAACG TERM 188 241115 - 241136 + r 93 -18.7 -3.25823 | opp_overlap 241115, overlap 241097 GTGACCAAAACAAAA CGGCCGGGC GAAA GCCCGGCCG TTGGTATCAGCAACG sdhB 241944 - 241162 - | succinate dehydrogenase iron-sulfur subunit sdhA 243875 - 242052 - | succinate dehydrogenase flavoprotein subunit sdhD 244292 - 243879 - | succinate dehydrogenase, cytochrome b subunit sdhC 244687 - 244289 - | succinate dehydrogenase, cytochrome b subunit czcD 245070 - 246014 + | cation diffusion facilitator family transporter TERM 189 246135 - 246093 - T 74 -12.7 -3.28712 | gap 1, overlap 246097 TCCTCCTCGTCAGAA GTCATTCCGGG-GCGCTCGC GATA GCGAGCGAACCCGGAATCTC GAGGTGACGGAAAAG TERM 190 246131 - 246097 - T 80 -16.5 -2.59431 | gap 1, overlap 246093 CCTCGTCAGAAGTCA TTCCGGG-GCGCTCGC GATA GCGAGCGAACCCGGAA TCTCGAGGTGACGGA matB 247759 - 246248 - | malonyl-CoA synthase TERM 191 246471 - 246453 - G 81 -14.6 -3.53091 | ACGCCCTCGCCGAAA TCGGCGTG CGG CACGCCGA TCACCGCGGATTCGA TERM 192 246849 - 246885 + g 70 -13.1 -3.02043 | gap 1 GTGTTCATGTTGGTC TCGGTCATGCCGTAGC GCTCGA GC-ACGGCGTGACCGG TCTTCGCCGACCATT RPA0222 248034 - 248609 + | beta-Ig-H3/fasciclin domain-containing protein TERM 193 248712 - 248677 - f 85 -14.6 -3.54459 | opp_overlap 248682, overlap 248678 GCAAGTCGCCGCAAA TGAAGGCGCGGGCCGG GTGA CCGGCTCGCGCTTTCG TGATCCCGATCGCGC TERM 194 248711 - 248678 - f 86 -18.1 -2.72461 | opp_overlap 248682, overlap 248677 CAAGTCGCCGCAAAT GAAGGCGCGGGCCGG GTGA CCGGCTCGCGCTTTC GTGATCCCGATCGCG TERM 195 248682 - 248707 + F 100 -19.7 -3.78953 | opp_overlap 248678 248677 TCGCCGCAAATGAAG GCGCGGGCCGG GTGA CCGGCTCGCGC TTTCGTGATCCCGAT RPA0223 248831 - 249469 + | hypothetical protein TERM 196 249501 - 249549 + F 71 -12.6 -3.09635 | gap 1, overlap 249509 TCCGTCATGGCGAGC GCCGCGAAGCAATCCCACCTC CGTGCATC GAGCTG-GATTGCTTCGCTGC TTCGCTCCTCGCAAT RPA0224 249585 - 250364 + | twin-arginine translocation pathway signal TERM 197 250378 - 250426 + F 76 -10.2 -3.84406 | gap 2, overlap 250378 AGTCGTCCTCATCCG CC-CGTCAATCCGGG-GCACGCGC AAC GCGCGTGAGCCCGGAATCCCGCGG TTATTGTGATCGGCG sodC 250637 - 251155 + | putative superoxide dismutase (Cu/Zn) RPA0226 252486 - 251299 - | major facilitator transporter TERM 198 251533 - 251509 - G 78 -15.7 -3.18681 | GTTGAAGCGGACGAA CGCGGTGGTCG AGG CCACCACCGCG AAGAACGACACCCCG leuB 252707 - 253819 + | 3-isopropylmalate dehydrogenase TERM 199 253893 - 253873 - T 95 -19.7 -3.20367 | overlap 253864 CAACAATGCGAGGAA CCGCCGGGC CCA GCCCGGCGG GGACCTGAACCCAAA TERM 200 253941 - 253909 - T 100 -24.3 -3.76125 | opp_overlap 253909 253915, overlap 253915 GGACCTGAACCCAAA CAAAAACGCCCGCCG GAT CGGCGGGCGTTTTCG TTTCTGAAGCTGTCG TERM 201 253909 - 253941 + T 100 -22.1 -3.88787 | opp_overlap 253909 253915, overlap 253915 GGACCTGAACCCAAA CAAAAACGCCCGCCG GAT CGGCGGGCGTTTTCG TTTCTGAAGCTGTCG TERM 202 253935 - 253915 - T 100 -19.7 -5.33026 | opp_overlap 253909 253915, overlap 253909 GAACCCAAACAAAAA CGCCCGCCG GAT CGGCGGGCG TTTTCGTTTCTGAAG TERM 203 253915 - 253935 + T 100 -19.7 -4.61873 | opp_overlap 253915 253909, overlap 253909 GAACCCAAACAAAAA CGCCCGCCG GAT CGGCGGGCG TTTTCGTTTCTGAAG RPA0228 254377 - 253976 - | hypothetical protein RPA0229 255330 - 254521 - | hypothetical protein asdB 255445 - 256479 + | aspartate-semialdehyde dehydrogenase TERM 204 256509 - 256531 + F 100 -16.3 -4.41494 | opp_overlap 256509 GATATCGACAGGCAA TGGCCGGGG CTCGT CCCCGGCCA TTTTCGTTCGGGGTG TERM 205 256531 - 256509 - f 86 -16.3 -3.14026 | opp_overlap 256509 GATATCGACAGGCAA TGGCCGGGG CTCGT CCCCGGCCA TTTTCGTTCGGGGTG RPA0231 256615 - 257169 + | hypothetical protein RPA0232 257965 - 257321 - | carbonate dehydratase TERM 206 257473 - 257492 + g 72 -7 -4.18494 | overlap 257474 TCATCAGGTTCTCGA TGCTGCGG AACA CCGCGGCC TTTTCGATCCGGGTG RPA0233 258147 - 259025 + | Citryl-CoA lyase TERM 207 259049 - 259100 + T 72 -7.9 -4.20148 | gap 1, overlap 259050 259099 GCGGCTAATACAGCG GATGGTCATTCCGGGG-CGCGAGC GCACA GCTCGCGACCCCGGAATCCCGAGA TTGTTTTGCGATCGT TERM 208 259173 - 259130 - T 75 -13.8 -3.05844 | gap 1, overlap 259171 TTGGTGATTTGAACA TCGCGATTCCGGGTTCGCCGC TGC GCGGCGC-CCCGGAATGACGG AGCCGATGGCTGCTA RPA0234 260894 - 259203 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 209 261552 - 261532 - R 100 -14 -4.53036 | CGACAAAGACGAAAA TGGCCGGG GCGAA CCCGGCCA TCACAAAGCTTGATC TERM 210 261653 - 261635 - R 78 -11.6 -3.794 | opp_overlap 261622 CGCCAAGCGAGGAAA CCGGGGCG TTA CGCCCAGG CGCGCTCGGTCTTCA leuD 262248 - 261643 - | isopropylmalate isomerase small subunit RPA0236 262747 - 262334 - | hypothetical protein RPA0237 263432 - 263716 + | hypothetical protein TERM 211 263755 - 263734 - f 93 -18.7 -3.14931 | opp_overlap 263734 CGGATCGGTTACCAA CGGGCCCGC AAAC GCGGGCCCG TTTTCGTTGCGGCAG TERM 212 263734 - 263755 + F 100 -18.7 -4.4078 | opp_overlap 263734 CGGATCGGTTACCAA CGGGCCCGC AAAC GCGGGCCCG TTTTCGTTGCGGCAG RPA0238 263816 - 264139 + | hypothetical protein TERM 213 264247 - 264230 - f 76 -12.7 -3.50853 | TTGGTGCAACGACAA TGCGCCG CCTG CGGCGCA GGGAGAGGCGACATG RPA0239 264260 - 264946 + | hypothetical protein TERM 214 264994 - 264961 - T 100 -17.5 -4.60041 | opp_overlap 264962 264967, overlap 264962 264967 ACCGATCCCGAAAAA GCAAAACAGGCGCCC CGAG GGGCGCCTGTTTCGT TGTTAGTTCGACCGG TERM 215 264993 - 264962 - T 95 -21 -3.35542 | opp_overlap 264962 264967, overlap 264961 264967 CCGATCCCGAAAAAG CAAAACAGGCGCCC CGAG GGGCGCCTGTTTCG TTGTTAGTTCGACCG TERM 216 264962 - 264993 + T 100 -18.8 -3.81146 | opp_overlap 264962 264961 264967, overlap 264967 CCGATCCCGAAAAAG CAAAACAGGCGCCC CGAG GGGCGCCTGTTTCG TTGTTAGTTCGACCG TERM 217 264967 - 264988 + T 100 -17.3 -4.11412 | opp_overlap 264967 264962 264961, overlap 264962 CCCGAAAAAGCAAAA CAGGCGCCC CGAG GGGCGCCTG TTTCGTTGTTAGTTC TERM 218 264988 - 264967 - T 100 -17.3 -4.77757 | opp_overlap 264962 264967, overlap 264962 264961 CCCGAAAAAGCAAAA CAGGCGCCC CGAG GGGCGCCTG TTTCGTTGTTAGTTC leuC 266422 - 265013 - | isopropylmalate isomerase large subunit TERM 219 265620 - 265599 - G 75 -11.5 -3.64822 | AGCTCGTGATCGAAA TGCGCGCCG TCGT CGGAGCGCA GCGTGTCCCAATAGC TERM 220 266683 - 266702 + r 70 -10.6 -3.57144 | opp_overlap 266683 ACGCGCAACAAAAAA GCGCGACC CAAA GGCCGCGC TTTCGAAATCCGAAA TERM 221 266702 - 266683 - R 100 -12.8 -5.45652 | opp_overlap 266683 ACGCGCAACAAAAAA GCGCGACC CAAA GGCCGCGC TTTCGAAATCCGAAA rplS 267121 - 266732 - | 50S ribosomal protein L19 trmD 267981 - 267235 - | tRNA (guanine-N1)-methyltransferase rimM 268654 - 268124 - | 16S rRNA processing protein RimM rpsP 268987 - 268667 - | 30S ribosomal protein S16 TERM 222 269131 - 269100 - R 81 -16.6 -2.78384 | gap 1 GTTGTGGGGAGGAGA TTCCGGGTTCGCCGC TGC GCGGCGC-CCCGGAA TGACCGAGAGGGAGA ffh/ftsY 270707 - 269157 - | signal recognition particle protein TERM 223 269743 - 269789 + g 74 -5.5 -4.56597 | overlap 269744 269745 269748 TTGCCCTTGCGCATC TTCTCGGCGACGGCGGCCGCC TTTTC GGCGTCCAGCGTCGCGGCGGC TTTTTCGACCAGCGA RPA0246 271220 - 271591 + | PilT protein, N-terminal romA 271596 - 272657 + | putative outer membrane protein bp26 273365 - 272667 - | hypothetical protein RPA0249 274144 - 273362 - | transcription activator, effector binding dapF 274381 - 275262 + | diaminopimelate epimerase TERM 224 276096 - 276113 + G 72 -8.3 -4.07885 | opp_overlap 276083 AAGCGCCGTCACTGC CGCGCCG ACGC CGTCGCG TTTTGCGAGGAGGTC RPA0251 275262 - 276533 + | MiaB-like tRNA modifying enzyme RPA0252 277205 - 276543 - | hypothetical protein RPA0253 277803 - 277390 - | hypothetical protein gpsA 278795 - 277806 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase gcp 280000 - 278831 - | O-sialoglycoprotein endopeptidase TERM 225 278962 - 279012 + g 85 -18.2 -2.63631 | overlap 278960 CGGCTCCGGCCCAGG CGATCATCGCGCCGTTGTCGGTGC ACA GCGCCGGCGGCGGCACGATCAGCG TGGTCTGCACCTTGG TERM 226 280858 - 280843 - g 82 -6.1 -4.73388 | opp_overlap 280856 AAGCCGGACGAAAAA GCGCT GCTCGA AGCGC TGGATCGGGCCCTCG RPA0256 280147 - 280893 + | uroporphyrinogen III synthase HEM4 RPA0257 280945 - 282354 + | hypothetical protein TERM 227 284055 - 284026 - g 70 -10.6 -3.53761 | opp_overlap 284026 284015 284053, overlap 284029 CAACGGCCGGGCAAA GCAGCGGCTGGC GGGGTT ACCGGCCGCCGC GCTGAGTTGCACGGC RPA0258 282363 - 284060 + | HemY-like TERM 228 284053 - 284073 + T 76 -10.3 -3.85389 | opp_overlap 284026 284029, overlap 284026 284015 GGGGTTACCGGCCGC CGCGCTGAG TTG CACGGCGCG TTTCGGTTGTTGGGA TERM 229 284136 - 284104 - T 76 -7.5 -4.38712 | opp_overlap 284123 284133 284134, overlap 284107 284109 CGGAGTTCGACAAAA CCACATCGGCGGACG CTC CGGCCGCCGGTTCAG GCGCCCTGGTTCTTG TERM 230 284600 - 284629 + T 70 -12.2 -3.14931 | opp_overlap 284600 284605, overlap 284605 GGCAGGGGTCAAATA GAAAAGCCCGCG GCGATG CGCGGGCTTTTG TTGGTACCGGCTCAC TERM 231 284629 - 284600 - T 72 -12.2 -3.35597 | opp_overlap 284600 284605, overlap 284605 GGCAGGGGTCAAATA GAAAAGCCCGCG GCGATG CGCGGGCTTTTG TTGGTACCGGCTCAC TERM 232 284624 - 284605 - T 100 -12.1 -4.78848 | opp_overlap 284600 284605, overlap 284600 GGGTCAAATAGAAAA GCCCGCG GCGATG CGCGGGC TTTTGTTGGTACCGG TERM 233 284605 - 284624 + T 100 -12.1 -4.71426 | opp_overlap 284605 284600, overlap 284600 GGGTCAAATAGAAAA GCCCGCG GCGATG CGCGGGC TTTTGTTGGTACCGG RPA0259 285531 - 284749 - | transmembrane sensor protein TERM 234 286554 - 286578 + G 90 -18.5 -3.02263 | opp_overlap 286551 286548 ATCCACAAATCACTG GCGCGGGCGGC GTC GCCGACCGCGC TGTTCACCGGACTGT RPA0260 286170 - 287165 + | AppA/PpaA family photosynthesis gene regulator TERM 235 287192 - 287218 + F 100 -21.6 -3.19192 | overlap 287217 CCTTTCGACATCTCA CGGCCGCTTCGG ATA CCGAGGCGGCCG TTGCGTTGAGTCGCA RPA0261 287243 - 288424 + | hypothetical protein rlp2 289750 - 288452 - | ribulose bisphosphate carboxylase-like protein; rubisco-like protein RPA0263 290287 - 289865 - | hypothetical protein TERM 236 290606 - 290628 + G 75 -3.2 -4.74215 | overlap 290586 290601 290624 CCCGGCGGAGGTCCG CGGCGGCTTC ATC GGCGTCGACG TTTTCTTCGTGATCT RPA0264 290514 - 292451 + | O-antigen acetylase algJ 293670 - 292504 - | alginate o-acetyltransferase AlgJ TERM 237 293554 - 293508 - G 70 -10.2 -3.64822 | gap 1, overlap 293541 AGCCGTGCAGCGAAA GATCGAAC-GGCACCTGCTGG GTGACG CCGACAAGTGCCGGCCCGATC CGAACGGCGTGCGAC RPA0266 295085 - 293673 - | putative alginate o-acetyltransferase AlgI TERM 238 295397 - 295376 - H 76 -10.1 -3.89346 | gap 1, opp_overlap 295376 CCCGCATCCGAGAAA CGG-CGCGCC GTC GGCACGACCG TGGGCAGTCGTATGC TERM 239 295539 - 295504 - H 72 -13.8 -2.71924 | overlap 295503 GATTTTGCCTCAAAT GCGACCGAGGGCGGCC GGCG GGCCGCCTGCGGCGGC GGCGAAATTAGGGTC TERM 240 296090 - 296044 - g 72 -7.1 -4.18018 | gap 2 CGCCTTCATCGAAAA GCTGACCGCCGGCATGCCGGGCG GTG CGC-CGAC-CGCCGCCGAGCTGC TCCAGGAAGCCGAAG TERM 241 296556 - 296585 + G 74 -9.9 -3.7821 | overlap 296557 CGACCGACGACGCCA CCGTCGAGGGCCG CAAG CGGCTGTCGACGA TTCTGTTCTCGTAGT trx 295679 - 296599 + | thioredoxin RPA0268 296626 - 297303 + | Lon family ATP-dependent protease TERM 242 297323 - 297304 - f 70 -10 -3.61398 | gap 1, opp_overlap 297317, overlap 297315 CCGCCGCTGCAATAA CGCGCAGCA ATT TGC-GCGCG CGCGTTGACGGCGCC RPA0269 297393 - 297590 + | hypothetical protein ubiH 299087 - 297726 - | 2-octaprenyl-6-methoxyphenyl hydroxylase tesB 299186 - 300061 + | acyl-CoA thioesterase II glnK1 300253 - 300591 + | GlnK, nitrogen regulatory protein P-II TERM 243 301208 - 301238 + G 76 -6 -4.57073 | overlap 301205 CATCTTCGTCTATGT GCCGCTGGCGCA TTGGATC TGGGGCGGCGGC TTTTTGGGCGCAATG amtB1 300666 - 301997 + | ammonium transporter AmtB TERM 244 302060 - 302095 + F 90 -17.8 -3.01712 | gap 1 TCATTGTGTCCGCAA GCTG-GCATGCCTGATT ATT GATCAGGCATGCCCAGC TGTTGAGCGCGACCG glnK2 302307 - 302645 + | GlnK, nitrogen regulatory protein P-II amtB2 302683 - 304125 + | ammonium transporter TERM 245 304210 - 304235 + F 100 -18.3 -4.57482 | TGTCCGAACCGTCGA GGGGTCCCAGC GCAA GCTGGGGCCCC TTTCTTTATGGCTCG RPA0276 304243 - 304590 + | PAP/25A core/DNA polymerase beta-like domain-containing protein RPA0277 304743 - 304937 + | hypothetical protein RPA0278 304991 - 306286 + | aminotransferase, class I and II TERM 246 307209 - 307172 - g 81 -16.3 -3.15583 | gap 1, overlap 307170 GGAAGAGATCGAAGA CGAGGACGACGAGGAGGA GGC CCCTCC-CGTCGCCCGCG CGCCGCGCAAGAAGG RPA0279 306300 - 308768 + | FtsK/SpoIIIE family protein RPA0280 308786 - 309727 + | outer membrane lipoprotein carrier protein LolA xthA1 310015 - 310827 + | exodeoxyribonuclease III RPA0282 311328 - 310879 - | cyclic nucleotide binding protein TERM 247 311101 - 311131 + g 85 -10.4 -4.2231 | gap 1, overlap 311127 GCCGATCAGATCGCC CGGCCGCG-CCAC CGTCTC GTGGACGCCGCCG TTTTCCATGGTGATT RPA0283 312054 - 311368 - | two-component transcriptional regulator TERM 248 312650 - 312660 + G 95 -8.2 -5.16841 | opp_overlap 312626 312628, overlap 312627 312646 GCGGATTGCCGGCCG CGGC AGC GCCG TTTTTCTTCATCTGG RPA0284 312219 - 312782 + | hypothetical protein RPA0285 313522 - 312863 - | hypothetical protein TERM 249 313772 - 313723 - g 72 -8.6 -4.15222 | gap 3 ATCGTCCGCAAGAAA GCCAAGC-TCA-GAGCCTTGCTCGG CAT CCGTGCCAGGCTCGTGGTGCT-GGC GCTCATCCTTGTCTG RPA0286 313693 - 315366 + | diguanylate cyclase TERM 250 315444 - 315462 + F 74 -11.6 -3.53012 | overlap 315445 GTTTCATGGCCTAGT CCGCGCGC TTC GCGCGCGA TTTGACCCGAGCCCC TERM 251 315445 - 315461 + F 78 -15.1 -2.71712 | overlap 315444 TTTCATGGCCTAGTC CGCGCGC TTC GCGCGCG ATTTGACCCGAGCCC TERM 252 316255 - 316219 - g 73 -12.9 -3.28712 | CCGCTGGCCCGACAA GGTGCGGCTGATGCAGC GCA ACTGGATCGGCCGCTCC GAAGGCCTGATGGTG TERM 253 317523 - 317490 - g 78 -15.3 -3.09671 | overlap 317511 AGTCCAAGCGCAACA CCGTCGATCCCGACG ACAT CATCGGGACCTACGG AGCCGACACCGCGCG leuS 315572 - 318202 + | leucyl-tRNA synthetase RPA0288 318189 - 318752 + | hypothetical protein holA 318809 - 319840 + | DNA polymerase III subunit delta RPA0290 320321 - 320082 - | hypothetical protein parB1 321235 - 320345 - | parB-like partition proteins TERM 254 320459 - 320473 + g 74 -5.6 -4.56597 | overlap 320453 CACCTTCATGCCGAG CGCATC GCT GAGGCG TTTTTCGAGCGCCAG parA 322262 - 321408 - | cobyrinic acid a,c-diamide synthase TERM 255 322141 - 322103 - G 70 -11.7 -3.39803 | gap 1, opp_overlap 322121 GATCGAGATCGACAA TCAGCAC-GCGCTCGCCG ATCG CGGCCAGGGCCGTGCCGA GATTGATCGCGGTGG gidB 322961 - 322290 - | methyltransferase GidB TERM 256 322984 - 322996 + r 81 -6.9 -4.8066 | overlap 322968 CACTGCGGGGGAGAC GGCCG TGG TGGCC TTTTTAGATTATATT gidA 325073 - 323133 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 257 324476 - 324461 - G 74 -10.4 -3.82031 | opp_overlap 324469 CGAACGACGATGAAA GCCCCA TCGC TGGGGC CTCGTCGATCCGGCC trmE 326492 - 325167 - | tRNA modification GTPase TrmE TERM 258 325630 - 325597 - G 76 -15.4 -2.84812 | AGCCACAGCACCAGA TCCGCCGCCGC-CGCT CGCG AGCGAGCG-CGGCGGA CGCCCTCCTGCTCGA TERM 259 326535 - 326555 + r 95 -19.7 -3.14683 | opp_overlap 326535 GAACGCAAACAAAAA GGGCGCCCC GTG GGGGCGCCC TTGATGGCCGGCTAT TERM 260 326555 - 326535 - R 100 -19.7 -5.33026 | opp_overlap 326535 GAACGCAAACAAAAA GGGCGCCCC GTG GGGGCGCCC TTGATGGCCGGCTAT rho 327845 - 326580 - | transcription termination factor Rho RPA0297 328558 - 328106 - | hypothetical protein TERM 261 328934 - 328918 - H 85 -5.8 -5.06414 | gap 1, opp_overlap 328929, overlap 328919 328920 GCCTGTGAAGAAAAA GC-CGGG TTAT CCCGAGC CCGACGGCCGTGGCT RPA0298 329001 - 329840 + | hypothetical protein maf1 329837 - 330445 + | putative maf protein TERM 262 330710 - 330664 - g 93 -10.8 -4.30809 | gap 1, opp_overlap 330672 330673, overlap 330667 TAAGATCTACGAAAA CGAG-GCGGTGCCGGCGATCG AGGCGG CGTTTCCCGGCACCACGCTCG GCGGCAAGGTCGATC coaE 330542 - 331141 + | dephospho-CoA kinase dnaQ 331177 - 331875 + | DNA polymerase III, epsilon subunit TERM 263 331924 - 331897 - T 84 -17.1 -2.70932 | overlap 331900 GTCTTCCTGGAACGA CAATGCCCGGC GCATCG GCCGGGCATTG CAAAAGTCATGAAGT TERM 264 331921 - 331900 - T 76 -13 -3.50853 | overlap 331897 TTCCTGGAACGACAA TGCCCGGC GCATCG GCCGGGCA TTGCAAAAGTCATGA secB 332427 - 331954 - | preprotein translocase subunit SecB TERM 265 332779 - 332765 - gH 86 -12.8 -4.07568 | opp_overlap 332759 CCTGCTGTGCCAAAA CGCGCC ATT GGCGCG CCGCGGTTGATGCCT TERM 266 332840 - 332807 - gH 73 -11 -3.56643 | gap 2 CCTACATGGTGTAAA CCGGCTCTCTGCCGCG TTGG CGCCGC-GAG-GCCGG AGACCAAAGCCGCGC TERM 267 332859 - 332849 - gH 71 -8.2 -3.83205 | overlap 332850 AGGCCGGAGACCAAA GCCG CGC CGGC AGCCCCGGCCCGATC TERM 268 333356 - 333343 - gH 76 -8.1 -4.18506 | GGATCGCGAAAAGAA CGACC TCAA GGTCG AGACCCGCTTCGTGT RPA0303 332729 - 333598 + | import inner membrane translocase, subunit Tim44 TERM 269 333627 - 333651 + GF 72 -13.6 -2.69799 | gap 1, overlap 333591 333590 333600 CGCCGCGCCGCCCTC GC-CGGCTGCG TTCT CGCAGCCGCGC TACTGTCTGCGCTGG TERM 270 334618 - 334572 - gf 71 -12.3 -3.2396 | gap 2 AAGGACGACGATGAA GCGATCG-G-GGCCCAAGGCGTG CCG CTCACCCCAGGCCGCTCGATCGC CGTCGACAAGGGTCT TERM 271 334746 - 334766 + GF 71 -14 -2.54504 | opp_overlap 334732, overlap 334745 334745 ACCGGCTCGGCGATC GTCGGCCC AGCGC GGGCCGAC CTGTATTTCGGCGCT RPA0304 333507 - 335069 + | outer membrane lipoprotein GNA33, membrane-bound lytic murein transglycosylase RPA0305 335075 - 335659 + | Smr protein/MutS2 hslU 337296 - 335995 - | ATP-dependent protease ATP-binding subunit TERM 272 336920 - 336952 + g 75 -3.2 -4.82901 | gap 1, overlap 336930 ACGCGTTCCTCGGCG GCGACCTGGGCGCGC GCCT GCACGTCCTTG-CGC TTTTTCTCGCGCACC RPA0307 337949 - 337338 - | hypothetical protein hslV 338515 - 337946 - | ATP-dependent protease peptidase subunit TERM 273 338657 - 338680 + H 72 -3.7 -4.56597 | opp_overlap 338675, overlap 338659 CAGTAGCGAAGGTGT CACCGGCCT GTTAAA AGACCGGCG TTTTTACCGGAGAGC hisB 338703 - 339296 + | imidazoleglycerol-phosphate dehydratase RPA0310 339324 - 339845 + | hypothetical protein hisH 339842 - 340492 + | imidazole glycerol phosphate synthase subunit HisH hisA 340489 - 341226 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 341237 - 342004 + | imidazole glycerol phosphate synthase subunit HisF hisE 342058 - 342381 + | phosphoribosyl-ATP pyrophosphatase TERM 274 342382 - 342360 - f 71 -5.5 -4.25104 | gap 1, overlap 342361 GGGCCTGGAGGAAAA GGC-GTCGCG CAAG CGCGACTGAC GGCATCGGCCGCGCG coaA 342456 - 343412 + | pantothenate kinase RPA0316 344551 - 343601 - | hypothetical protein RPA0317 346622 - 344712 - | sensor histidine kinase TERM 275 345819 - 345856 + g 73 -11.3 -3.70076 | gap 1, opp_overlap 345844 GCGGAGTTCGCCACT CTGGTCGCCTCGCTC-GA CGA TCAGAGCGACGCCGCCAG TTTCAGTGAATTTGA TERM 276 346252 - 346308 + g 70 -10.1 -3.65514 | gap 3, opp_overlap 346248, overlap 346281 346284 ATTGCCAGCAACCGC GACTTG-GCGTGGTTCGCGGCGTCGGCG CTCT CGC-G-CGCCGCGATCAGCGCGCGCGTC TTGCTTTGATTTGGC TERM 277 346281 - 346306 + g 70 -11.7 -3.39643 | overlap 346252 346284 CGCGGCGTCGGCGCT CTCGCGCGCCG CGAT CAGCGCGCGCG TCTTGCTTTGATTTG RPA0318 348287 - 346749 - | Mg chelatase-related protein TERM 278 348379 - 348358 - R 100 -18.7 -4.26351 | opp_overlap 348377 CATTAAGTGAACAAA CCGGCGGGC ATTC GCCCGCCGG TGCGATGTCAGGCAC TERM 279 348377 - 348396 + r 73 -2.8 -4.72986 | opp_overlap 348358 CGGGCATTCGCCCGC CGGTGC GATGTCAG GCACTG TTTTTGGTGCGGCTC RPA0319 348611 - 348387 - | hypothetical protein RPA0320 349264 - 348608 - | autoinducer (acylhomoserine lactone) synthase TERM 280 349304 - 349272 - R 74 -9.8 -3.78953 | overlap 349259 349273 ACCTGCATGATGAAA TTCCCCTCCTGCAG TGGGT CTGCAGGCGGGAAC AGTGCAGGTGCGAAC TERM 281 349303 - 349273 - R 70 -13.3 -2.87051 | overlap 349259 349272 CCTGCATGATGAAAT TCCCCTCCTGCAG TGGGT CTGCAGGCGGGAA CAGTGCAGGTGCGAA RPA0321 350081 - 349350 - | two-component LuxR family transcriptional regulator gshB 351259 - 350318 - | glutathione synthetase RPA0323 351724 - 351332 - | hypothetical protein RPA0324 352673 - 351711 - | hypothetical protein TERM 282 352211 - 352183 - G 100 -3.8 -6.06723 | gap 1, overlap 352185 CCGTCGAAAAAAAAA CGGTCGGTCGGCA ACCC TGC-GAGCGACAG TGCAACCAACACGGC TERM 283 352614 - 352648 + g 81 -10.6 -4.13654 | overlap 352615 CAGAAACGTTCGTGC GTTCGGTTCCGCCGCT GCG GGCGGCGGTGCTGAAA TTTCTGGTTTGACGC TERM 284 352615 - 352647 + g 72 -14.1 -3.0771 | overlap 352614 AGAAACGTTCGTGCG TTCGGTTCCGCCGCT GCG GGCGGCGGTGCTGAA ATTTCTGGTTTGACG TERM 285 353594 - 353564 - g 83 -8.3 -4.62069 | opp_overlap 353573, overlap 353537 353566 GTCGCATTCGAAAAA TACGGCGCC-GACCG TGC CGGTCCGGCGCGG-A CCATTGCGGCCTCTC TERM 286 353593 - 353566 - g 84 -13.4 -3.92746 | gap 1, opp_overlap 353573, overlap 353537 353564 CGCATTCGAAAAATA CGGCGCC-GACCG TGC CGGTCCGGCGCGG ACCATTGCGGCCTCT RPA0325 352886 - 354085 + | extracellular ligand-binding receptor RPA0326 354465 - 354103 - | MarR family transcriptional regulator hemN2 356027 - 354870 - | coproporphyrinogen III oxidase RPA0328 356649 - 356017 - | putative deoxyribonucleotide triphosphate pyrophosphatase rph 357414 - 356701 - | ribonuclease PH hrcA 357569 - 358657 + | heat-inducible transcription repressor RPA0331 358745 - 359371 + | heat shock protein GrpE TERM 287 359466 - 359446 - T 100 -14 -5.03994 | opp_overlap 359446 TTTGAGAGAGAAAAA CGACGCGC CGCTC GCGCGTCG TTTGCGTTTGGTCAG TERM 288 359446 - 359466 + T 86 -14 -3.87149 | opp_overlap 359446 TTTGAGAGAGAAAAA CGACGCGC CGCTC GCGCGTCG TTTGCGTTTGGTCAG RPA0332 360419 - 359478 - | hypothetical protein TERM 289 359876 - 359849 - G 72 -13.4 -3.1372 | gap 1, opp_overlap 359852, overlap 359847 CATCGGTCAGCAATA GCGCGG-CGCCGG GCG CCAGCGTCCGCAC CGTCTTGAAGTCGCC TERM 290 360388 - 360344 - G 70 -11.2 -3.53012 | opp_overlap 360345 TGCCGCGTGGGTAAA CCGCGTCGGCGGCGACCGCG TTGGT CGCGGTGGCCGACAGCAGGG CAATCGCAAACAAGC TERM 291 360508 - 360564 + H 70 -12 -3.16921 | gap 1, opp_overlap 360488 CGGCCGGCGACCGCG ATG-ATGCGCTGCGCGCGCCGGCCCGG CAAG CCGCGCCGCAGCGCGCTGCGCAGGCGG TTCGTAACGATTCGT dnaK 360754 - 362649 + | chaperone DnaK TERM 292 362686 - 362726 + F 100 -17.6 -3.7511 | GCGACGAGGACCATG CCCCCATCTGACGAACGC CATCC GCGGTCATCAGGTGGGGG TTGTCTTGTAAGGCG dnaJ 362864 - 364003 + | chaperone DnaJ RPA0335 364097 - 364702 + | putative phospholipid N-methyltransferase RPA0336 364804 - 365385 + | NADPH-dependent FMN reductase pyrF 365393 - 366106 + | orotidine 5'-phosphate decarboxylase RPA0338 366132 - 366440 + | hypothetical protein dapB 366537 - 367352 + | dihydrodipicolinate reductase pgm1 368947 - 367433 - | phosphoglyceromutase TERM 293 368964 - 368995 + r 75 -14.4 -2.78384 | GCGAGAACTTTCCTG GATGTGGGGGGCGC CTGA GCGCTCCTCACACC TATGGTCGCGACCCG ogt 369971 - 369039 - | O6-methylguanine-DNA methyltransferase RPA0342 370502 - 369987 - | hypothetical protein TERM 294 370045 - 370055 + g 87 -6.8 -5.06414 | overlap 370022 GCCATCAAGGCCTTG GCGA AGT TCGC TTTTTCTTCCGCGCC nth 370525 - 371310 + | endonuclease III RPA0344 372997 - 371426 - | hypothetical protein RPA0345 374088 - 373120 - | putative protoporphyrin IX magnesium chelatase bchO RPA0346 375405 - 374662 - | CysZ-like protein aceK 377325 - 375493 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein RPA0348 378572 - 377649 - | hydrolase TERM 295 378218 - 378237 + g 79 -7.9 -4.56597 | CCATGCCGCGATTGT CCATCAG GATCAG CTGATGG TTTTTCGACAGCGCC TERM 296 378824 - 378843 + G 77 -10.7 -3.81951 | TTTGGGACCCCGCGG GCGCCGT GCTCGA ACGGCGC TTTGGTGGTGTGCCC TERM 297 379129 - 379155 + G 77 -5.8 -4.58395 | overlap 379114 CGCGGTTATCGGTGG GCTTATCGCGTT GTG AACTCGCTGAGC TTTTTGCCGCATCGA dcm 378721 - 379893 + | site-specific DNA-methyltransferase TERM 298 380142 - 380155 + G 73 -3.7 -4.65895 | opp_overlap 380118, overlap 380139 380143 CGCACCACGACGCCG ACCCG GAAT CGGGA TTTTTGGCTCGCCAA vsr 379890 - 380306 + | putative patch repair protein TERM 299 381074 - 381055 - g 70 -6.4 -4.2123 | GACGCACGCAACAAA TCCGCC TTCAAATG GGCGGA GGGCGAAACCGAAAT RPA0351 380311 - 381132 + | hypothetical protein lepA 382950 - 381139 - | GTP-binding protein LepA RPA0353 383056 - 384633 + | hypothetical protein TERM 300 384656 - 384631 - T 85 -14.7 -3.63305 | opp_overlap 384631, overlap 384623 GAGAGAAGCGCGAAA TAGCGGGCGGC GGCA GCCGCCGGCTA TTCTTCTTCGCCGAA TERM 301 384631 - 384656 + T 89 -14.7 -3.9461 | opp_overlap 384631 384623 GAGAGAAGCGCGAAA TAGCGGGCGGC GGCA GCCGCCGGCTA TTCTTCTTCGCCGAA RPA0354 384986 - 384654 - | PTS system phosphocarrier protein HPr, nitrogen regulation RPA0355 385384 - 384983 - | PTS system fructose subfamily IIA component RPA0356 386039 - 385572 - | HPr kinase TERM 302 385917 - 385870 - G 76 -14.9 -3.12895 | opp_overlap 385909 385910, overlap 385866 GGTTCCATGAAGACA CGGTCGTCGCCGATCAG-TTCCG CGCG CGGAATCTGCCCGGCG-CGCCCG GCCAGGATCAGCGCC exoS 387781 - 386036 - | periplasmic sensor signal transduction histidine kinase TERM 303 386548 - 386599 + g 79 -13.1 -3.63782 | gap 2, opp_overlap 386518 386576, overlap 386579 CTTGGCGCTGCAATT CGGCGTCGAGCCGGCTGGCATCGGA AATG TCCGAGATCAGTCGG-TCGA-GCCG TTTGACGTCGTGTTC TERM 304 387239 - 387253 + g 71 -3.4 -4.58395 | CGCGATCATCGCCCG CTCGAC GAT GCCGGG TTTTTCGGCGGTCGG chvI 388645 - 387944 - | two-component transcriptional regulator ChvI TERM 305 388789 - 388808 + H 78 -4.9 -4.72272 | overlap 388779 CGCGATCGGGGCAGG CCGGCCT TGATAT ATGCCGG TTTTTCGTGCCGCAA TERM 306 388956 - 388922 - g 72 -8.5 -4.09739 | CGAAGCTCGCCAAAA CGC-TGCTGCGCCGTCG CCG CGAGGGCGC-GCTCGCG ACGCTGATGGAAAAC RPA0359 388879 - 389613 + | hypothetical protein pckA 389802 - 391415 + | phosphoenolpyruvate carboxykinase TERM 307 391464 - 391444 - T 71 -11.1 -3.47029 | opp_overlap 391444, overlap 391416 391438 CGATTGAAATACGAA GGGCGGC TCGCAAG GCCGCCC TTTTTCTTGGCCGTG TERM 308 391444 - 391464 + T 100 -11.8 -5.07486 | opp_overlap 391416 391444 391438 CGATTGAAATACGAA GGGCGGCT CGCAA GGCCGCCC TTTTTCTTGGCCGTG RPA0361 392378 - 391503 - | hypothetical protein TERM 309 392424 - 392449 + H 71 -12.5 -3.06183 | gap 1, opp_overlap 392408 GTGATGCGATCGCGC CGACGCTGCCCG GAT CGGGC-GCGACG TTCGATCGGCATCAG TERM 310 393335 - 393291 - g 75 -14.3 -3.27525 | overlap 393286 393293 393296 TTGGCTGAAAGCCAA CACCACCGGCGGCAC-CCGCC TGCGC GCCGGCGTGCCGCCGG-GCTG GACCGTCGGCGACAA TERM 311 393331 - 393296 - g 85 -18.3 -2.79248 | gap 1, overlap 393286 393291 393293 TGAAAGCCAACACCA CCGGCGGCAC-CCGCC TGCGC GCCGGCGTGCCGCCGG GCTGGACCGTCGGCG penP 392647 - 393522 + | putative class A beta-lactamase precursor (penicillinase) TERM 312 393542 - 393554 + T 71 -4.7 -4.44667 | opp_overlap 393543, overlap 393507 393543 393549 CGCGGCGCGCTCAAG ACCGC TTG GCGGC TTTCTTCTTCGCCGC RPA0363 394664 - 393537 - | endonuclease/exonuclease/phosphatase family protein TERM 313 394328 - 394314 - G 75 -7.1 -4.32857 | overlap 394310 GCGGTTAAACAGAAA GGCGA GCCGT TCGCC GTTACCGCCGTCGGC RPA0364 395546 - 394743 - | permease TERM 314 395572 - 395562 - H 74 -2.4 -4.89393 | GAAATTCTACAAAAA GCTC CTT GTGC ACATAAAATATGCTA RPA0365 395640 - 396536 + | Beta-lactamase-like RPA0366 396635 - 396997 + | hypothetical protein TERM 315 397063 - 397083 + T 76 -14 -3.18571 | overlap 397061 397058 397058 CATCAGTTGTCGTTA TGGCCGGG CTGGT CCCGGCCA TCTGTGTTTCCGGGC TERM 316 397175 - 397156 - T 100 -12.1 -5.33405 | GCGACCAAACAAAAA CCCCGCC GGTGAG GGCGGGG TTCGGAGCTATCAGA rpoH 398106 - 397207 - | RNA polymerase factor sigma-32 TERM 317 397562 - 397576 + g 71 -12.8 -3.25823 | opp_overlap 397559 397556, overlap 397560 TTGAGCGAAGCATCG CCGCCG AGG CGGCGG TTCATGTCGACCACG TERM 318 398049 - 398032 - G 70 -11.3 -3.62096 | CTCGAGCATCGGAAA CTTGCGG ATTT CCGCAAG GTAGCGAGCAAGGCC rluD 399551 - 398328 - | pseudouridine synthase RluD TERM 319 398463 - 398502 + g 85 -16.4 -3.37245 | gap 1, overlap 398464 CTGCCGTCCGAGCCC TGCCAACGCGGCGCGCCCC GCC GGGGCGAGCTG-GTTGGCC TTGGTCTTGAAGTGC TERM 320 398464 - 398501 + g 93 -19.9 -2.62026 | gap 1, overlap 398463 TGCCGTCCGAGCCCT GCCAACGCGGCGCGCCCC GCC GGGGCGAGCTG-GTTGGC CTTGGTCTTGAAGTG TERM 321 399004 - 399033 + g 74 -12.2 -3.61715 | gap 2 CCGGTCTCGTGCCCG GCCGC-CGGG-TGG ACCA CCAGCCCGCGCGGC TTGTTCAGCACGATG TERM 322 399798 - 399840 + r 74 -9.1 -3.92542 | gap 1, opp_overlap 399790 CCACTAACGTCGTCA TGGCCGGGCTTG-CCCCG GCCATCCA CGGCCACAGGCCCGGCCA TTCTTTAAGGATGGA RPA0369 402719 - 400116 - | aminoacyl-tRNA synthetase, class I:ATP-binding region, ATPase-like RPA0370 405548 - 403032 - | diguanylate cyclase/phosphodiesterase TERM 323 403858 - 403874 + g 73 -9.3 -3.93256 | opp_overlap 403853 GGCTCGAACAGCTGC GCCCGGC CGC GCCCGGC TTCTTTGGCCATGTA metB 406933 - 405749 - | putative cystathionine gamma-lyase RPA0372 407065 - 407526 + | AsnC family transcriptional regulator trxC 407964 - 407527 - | thioredoxin RPA0374 409087 - 408104 - | putative Zn-containing alcohol dehydrogenase chaB 409382 - 409161 - | putative cation transport regulator pimt1 409612 - 410334 + | putative L-isoaspartyl protein carboxyl methyltransferase TERM 324 410551 - 410567 + G 72 -13.7 -3.01924 | GATCACCGACATTGC GCTCGGC GTC GCCGAGC TGTTCGGCGCCCATG RPA0377 410486 - 411310 + | hypothetical protein TERM 325 411410 - 411466 + T 76 -8 -4.25681 | gap 2, overlap 411372 411411 411415 GGTCAGGCCGTTTCC ACCACGTCGGGATTCCGGGTTCGCTTGC TAC GCAAGCGC-CCCGGAATGACCAC-TGGA TTTCTTCGCTTCGCT melA 412787 - 411507 - | putative alpha-D-galactoside galactohydrolase TERM 326 412907 - 412888 - H 73 -12.8 -3.22521 | opp_overlap 412888, overlap 412883 CGGATATGAAGTGAA CCGCACCC GTGC GGGCGCGG TCTTGACGCCGATCA pfkB 413011 - 413949 + | putative 6-phosphofructokinase RPA0380 414065 - 416377 + | oxidoreductase TERM 327 416977 - 416988 + G 79 -7.2 -4.57569 | TGTGGTACCGGGGGA CGGC CGAC GCCG TTTTTCAGAACATCG glgC 416649 - 417911 + | glucose-1-phosphate adenylyltransferase TERM 328 418732 - 418765 + G 73 -13.8 -3.12351 | opp_overlap 418725 418722 418750 418751, overlap 418756 CGAAAGCATCGCAGC CCGCGCCCGCAACA AGAAGG TGCTGCAGGCGCGG TTCGGTCTGAAGCCC glgA1 417908 - 419359 + | glycogen/starch synthases, ADP-glucose type RPA0383 419505 - 420305 + | enoyl-CoA hydratase RPA0384 420302 - 420874 + | hypothetical protein radC 421615 - 420890 - | DNA repair protein RadC TERM 329 422687 - 422666 - g 93 -10.1 -4.63932 | opp_overlap 422665 CATCGTCGAACAAAA GTCCGGCCA TTTT CAGCCGGAC CTGTTCGAGGATCAC TERM 330 423022 - 423005 - g 71 -9.1 -3.82084 | gap 1, overlap 422989 423006 CGCGAAGACGAAGAA GCCGGCGC GGA GC-CCGGC GACGGTGAAGACGCG RPA0386 421950 - 423050 + | Ku domain-containing protein map 424133 - 423309 - | methionine aminopeptidase, type I RPA0388 424329 - 426122 + | potassium/proton antiporter mepA 427109 - 426147 - | penicillin-insensitive murein endopeptidase TERM 331 427537 - 427515 - g 79 -2.6 -5.06414 | overlap 427518 CCGGCTGAAGAAAAA GAAGACGG CCCGAAT CCGTCCAC CTGCCGGCAGCGCCA TERM 332 427534 - 427518 - g 77 -5.1 -4.63592 | overlap 427515 GCTGAAGAAAAAGAA GACGG CCCGAAT CCGTC CACCTGCCGGCAGCG TERM 333 427614 - 427597 - g 78 -14.1 -3.54307 | AAGACGTTGTCGAAA CCGCGCC GGAC GGCGCGG CCGGCGGACGTTGCA RPA0390 427489 - 429726 + | diguanylate cyclase/phosphodiesterase RPA0391 431498 - 429741 - | alkaline phosphatase TERM 334 431235 - 431267 + g 88 -16.2 -3.62597 | GTTCAGCGTTACGTC GCGGAGCAGCAGCG CCGAT CGCGGCTGCCCCGC TTCTTGCGCGATCAG TERM 335 431452 - 431426 - G 83 -13 -3.89346 | overlap 431403 431402 GGTCGATTGGATAAA TCGTCTGGGCCG AAG CGGCCGAAACGA ACATCAGCGACGCAA TERM 336 431731 - 431682 - R 73 -11.3 -3.61398 | gap 1, opp_overlap 431681, overlap 431683 CCGGTCGTTCAACAA CCTCGGGATTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAATGACGGTG AGCTGCTATCAGCCC argG 433077 - 431740 - | argininosuccinate synthase TERM 337 433131 - 433148 + r 71 -9.1 -3.72576 | gap 1, opp_overlap 433129 GCGCATATCAAACTT CGCG-GCC AGC GGCACGCG TTTAATCGCGGCGGA RPA0393 433949 - 433170 - | phosphoesterase, PA-phosphatase related RPA0394 434446 - 433946 - | hypothetical protein RPA0395 435039 - 434446 - | metal dependent phosphohydrolase RPA0396 436318 - 435044 - | hypothetical protein TERM 338 436359 - 436330 - R 81 -12 -3.8969 | opp_overlap 436327 436330 CCATGCATATAAGAA CCCGCCGCCCGG TTGTCG CCGGCTGGCGGG TCGTCTGTGCCGGAA TERM 339 436330 - 436359 + r 75 -14.9 -2.69151 | opp_overlap 436330, overlap 436327 CCATGCATATAAGAA CCCGCCGCCCGGT TGTC GCCGGCTGGCGGG TCGTCTGTGCCGGAA RPA0397 437005 - 436430 - | hypothetical protein TERM 340 436540 - 436586 + g 70 -9.9 -3.72324 | CCTTGACGGTGATTT CGGCGCCGCGGCGCATCGCCT CGACC AGGCGTTCTTCCTCGGCGGCG TTCTTGATCCAGATG RPA0398 437995 - 437159 - | putative 2, 4-dienoyl-CoA reductase (NADPH) precursor RPA0399 439292 - 438123 - | transposase RPA0400 439493 - 440467 + | alcohol dehydrogenase and quinone oxidoreductase TERM 341 440517 - 440471 - T 93 -18.3 -3.30124 | CTGCATCCGTGAGAA TGCTGAATCGGTGGGGTA-GCGC GCA GCGCGTAACCCACCGATTCA-CA TCGCCGCGCGAAGCT RPA0401 442730 - 440595 - | amine oxidase TERM 342 442922 - 442878 - g 73 -3.5 -4.68424 | gap 2, opp_overlap 442902, overlap 442881 442887 442888 TAAGCCATGGAAAAA CAACAAGAAC-CGGCG-GACG ACGCG CGCCGCGCCGCGATCCTGCAG GCGGCCTTCGATGTT TERM 343 442919 - 442881 - g 76 -6 -4.44608 | gap 2, opp_overlap 442902, overlap 442878 442887 442888 GCCATGGAAAAACAA CAAGAAC-CGGCG-GACG ACGCG CGCCGCGCCGCGATCCTG CAGGCGGCCTTCGAT RPA0402 442869 - 443489 + | TetR family transcriptional regulator RPA0403 443882 - 443508 - | hypothetical protein phhB 444267 - 443965 - | pterin-4-alpha-carbinolamine dehydratase RPA0405 444410 - 445855 + | hypothetical protein RPA0406 447304 - 445859 - | hypothetical protein RPA0407 449585 - 447309 - | TonB-dependent receptor (outer membrane siderophore receptor) TERM 344 450150 - 450178 + H 84 -4.5 -5.12707 | gap 1, overlap 450149 450146 450153 450154 CGTCGCAACGCGTGC TGGTGCCCGGTC CTATTC GGCCGGGC-CTG TTTTTTGCGATTTCA TERM 345 450153 - 450176 + H 72 -7.3 -4.18259 | overlap 450149 450146 450150 450154 CGCAACGCGTGCTGG TGCCCGGTC CTATTC GGCCGGGCC TGTTTTTTGCGATTT bipA 450314 - 452137 + | GTP-binding protein TypA TERM 346 452163 - 452190 + F 86 -18.5 -2.62184 | GATACTCTGACTTTC CGATGCCCGGC CTTCGT GCCGGGCATCG TCGTCTCAAGGCCCC TERM 347 453333 - 453389 + G 77 -13.1 -3.61398 | gap 4, overlap 453336 453337 GCCTATTCGCATGCG CTGCCCGGCCAT-G-CCGGTGCC-CGAGC CGT GCTGGCGGCGCCGGTCGATGGCCGG-CTG TTCTTCGCCGGAGAG TERM 348 453336 - 453387 + G 80 -14.5 -3.38812 | gap 3, overlap 453333 453337 TATTCGCATGCGCTG CCCGGCCAT-G-CCGGTGCC-CGAGC CGT GCTGGCGGCGCCGGTCGATGGCCGGC TGTTCTTCGCCGGAG TERM 349 453337 - 453386 + G 85 -18 -2.63073 | gap 3, overlap 453336 453333 ATTCGCATGCGCTGC CCGGCCAT-G-CCGGTGCC-CGAGC CGT GCTGGCGGCGCCGGTCGATGGCCGG CTGTTCTTCGCCGGA RPA0409 452247 - 453515 + | amine oxidase TERM 350 453652 - 453623 - f 71 -5.9 -4.36914 | gap 1 GTCTGGTGCAGAAAA TCCACACGTTAACC GAT AATTAACGT-TGGA GCTTGAAGCCGGCCC RPA0410 453691 - 454200 + | GCN5-related N-acetyltransferase ppa 454277 - 454813 + | inorganic pyrophosphatase CPS1 454849 - 456330 + | hypothetical protein RPA0413 457407 - 456520 - | methenyltetrahydrofolate cyclohydrolase TERM 351 457478 - 457457 - R 81 -13.7 -3.61609 | GCATCGAAATGACAA CGCCTCCCC GGAC GGAGAGGCG AACGGTGGATCGCCC TERM 352 457515 - 457564 + r 89 -13.1 -4.18494 | gap 4, overlap 457517 GCCTCCCGGGTTGTT CA-TTCGGCG-GGC-TTG-GCCGCC ACCA GGCGGCGCAACGCCTCGCCGAGCTG TTTTGGATCGCCGTC TERM 353 457517 - 457561 + r 78 -15.9 -2.81208 | gap 3, overlap 457515 CTCCCGGGTTGTTCA TTCGGCG-GGC-TTG-GCCGCC ACCA GGCGGCGCAACGCCTCGCCGAG CTGTTTTGGATCGCC RPA0414 457852 - 457514 - | hypothetical protein RPA0415 458363 - 457866 - | hypothetical protein RPA0416 459444 - 458632 - | enoyl-CoA hydratase RPA0417 460026 - 459526 - | hypothetical protein RPA0418 460927 - 460130 - | glutamine amidotransferase RPA0419 461827 - 461048 - | short chain dehydrogenase/reductase family protein RPA0420 462630 - 462010 - | hypothetical protein TERM 354 462304 - 462282 - G 78 -9.8 -4.13654 | TCGTGAAATGATAAA GGTCAACGGC CTC GCCTTCGACC AGTGTCGCCGAGGCA RPA0421 464059 - 462674 - | cytochrome P450 TERM 355 462930 - 462902 - G 74 -5.2 -4.57073 | gap 1, overlap 462904 GACGCCCGGCAAAAA GCGCTCCGGTACG AACG CGTTC-GGATCGC TCCAGAGCTTGTCGT TERM 356 463323 - 463371 + g 71 -15.2 -2.52896 | opp_overlap 463321 ATCAGTTCGAATAGG TCGC-GCGGCGGAGCGCCTTCGGC CTT GCCGGCCGCGCGCCGC-GCAGCGA TCAGTTCGCCGATGA RPA0422 465181 - 464180 - | 2-hydroxyacid dehydrogenase TERM 357 464387 - 464404 + g 73 -14.1 -3.08173 | opp_overlap 464375 464374, overlap 464373 AACGTCGAGGCCGGC GCCGGCG ATGT CGCCGGC TTCGATCAGCTTGGT RPA0423 465416 - 465940 + | hypothetical protein TERM 358 466011 - 465987 - T 100 -15.7 -5.00884 | AGGGCGCGCAAAAAA GCCCGAGGGCA TGC TGCGCTCGGGC CATAACCTTCACCAA RPA0424 466539 - 466048 - | FUR family transcriptional regulator fabA 466798 - 467325 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase fabB 467387 - 468613 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 359 469452 - 469424 - g 70 -5.9 -4.18018 | gap 1, overlap 469427 CGGCTTCATGGAAAA GCA-CTCGCCGC TCGGCC GCGGCGTGACGC TGGAAGAACTCGGCG RPA0427 468789 - 469598 + | enoyl-(acyl carrier protein) reductase RPA0428 470289 - 469771 - | hypothetical protein TERM 360 470487 - 470468 - R 100 -16.4 -4.35524 | opp_overlap 470468 CGCGGAAACGCAAAA GGGCGGCC CGGA GGCCGCCC TTTCCTACTCATAGC TERM 361 470468 - 470487 + r 93 -16.4 -3.80573 | opp_overlap 470468 CGCGGAAACGCAAAA GGGCGGCC CGGA GGCCGCCC TTTCCTACTCATAGC katG 472727 - 470517 - | catalase/peroxidase HPI TERM 362 472856 - 472827 - H 91 -17.9 -3.19192 | opp_overlap 472827 CGGGATCGAATTGAA CGTCGCGGGCG TGGGGGAT CGCCCGCGACG TTGCTTCCTGGGGTG TERM 363 472827 - 472856 + H 95 -17.9 -3.40371 | opp_overlap 472827 CGGGATCGAATTGAA CGTCGCGGGCG TGGGGGAT CGCCCGCGACG TTGCTTCCTGGGGTG TERM 364 473549 - 473532 - g 74 -12.7 -3.53091 | ATCCGCGCGCCGAAA CGACGCC GATC GGCGTCG AGGAGATCGACCAGT oxyR 472997 - 473935 + | LysR family transcriptional regulator RPA0431 475629 - 473947 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 365 474241 - 474214 - G 87 -14.8 -3.86202 | gap 1, overlap 474209 CGCCACCACAGCAAA GCCGCGC-CCGGC CTC GCCGGCGCGCGCC GACTCGATCGTGGCG TERM 366 474300 - 474340 + g 72 -14.8 -2.73364 | overlap 474309 TGATGTGGTTGATCA GTTCGACGATGCCGCTCA TTGCT TGAGCCGCGTCGTTGAGC TGATTGGCCTGAGAG TERM 367 475854 - 475875 + r 80 -14.4 -3.19463 | opp_overlap 475854 CGCCGCAAAGAAAAA GGGCGGCC CGGTGA GGCCGCCC TTGATCGATGCTGAC TERM 368 475875 - 475854 - R 100 -15.1 -5.27335 | opp_overlap 475854 CGCCGCAAAGAAAAA GGGCGGCCC GGTG AGGCCGCCC TTGATCGATGCTGAC pnp 478087 - 475919 - | polynucleotide phosphorylase/polyadenylase TERM 369 477336 - 477354 + g 76 -8.8 -4.22524 | GCGGCACGCAGCTCC TGCTCGAC CAG GCCGAGCA TTTCCTTTTCGATCT TERM 370 477878 - 477890 + g 82 -6.2 -4.73613 | opp_overlap 477860 GCCGGGAATGCGGCC GGCC GCGTA GGCC TTTTCTTGGTAGTCG TERM 371 478377 - 478435 + r 77 -15.4 -2.60904 | gap 4, overlap 478415 ACATCTTGCTTCGGC C-GTCGCGGAGGCGTCGTGGCG--CGTCCG CTT CGGCCGGTCGTC-CGACGCCTCAGCGACGG ATGTTGTGCTTCTCG TERM 372 478415 - 478438 + r 70 -10.2 -3.56325 | overlap 478377 TCCGCTTCGGCCGGT CGTCCGACGC CTCA GCGACGGATG TTGTGCTTCTCGAGC rpsO 478695 - 478426 - | 30S ribosomal protein S15 truB 479798 - 478698 - | tRNA pseudouridine synthase B TERM 373 478894 - 478868 - G 100 -11.4 -4.63218 | GTCCGCGCAACAAAA CGGCCTGGCCCC GAT GGAGCCTTGCCG CATCAGCCCGAGTGA TERM 374 478955 - 478988 + g 76 -15.4 -2.87132 | gap 2 TCTCAACGGGCAGTA GC-GCGT-CGGCGAGG CTAC CCTCGCCGGACGCCGC TCTATCGCACAAAGC rbfA 480211 - 479798 - | ribosome-binding factor A infB 483036 - 480385 - | translation initiation factor IF-2 TERM 375 480781 - 480799 + g 72 -11.6 -3.61398 | GATGCCGTTGCGCTT GGCGGCCG CAG CGGCCTCC TTGTTGGCGCGGACC TERM 376 482860 - 482898 + g 76 -6.6 -4.56597 | gap 2 TTCAGGCGCCGCCGG CGCGGCCGGCTCGTCGCC ACCAA GGCGCCG--CTTGCCGCG TTTTTCGACCACCAC RPA0437 483808 - 483029 - | hypothetical protein TERM 377 483880 - 483908 + r 73 -10.9 -3.61398 | overlap 483852 483882 GCGGTTCAGTCCGCC GACTCGTCGGACG CTT CGTCCGCGGGGTC TTCTTCGGAGGCGAG nusA 485483 - 483870 - | transcription elongation factor NusA TERM 378 484179 - 484211 + g 70 -13.4 -3.06796 | opp_overlap 484171, overlap 484199 CAGAGCATCTTCGAC GCCGAGCTCCAGGC GCCGG GCCTCGAGCTCGGA TTCAATCCGGTCGAG TERM 379 485387 - 485419 + g 77 -7.8 -4.36914 | opp_overlap 485402, overlap 485386 TGGCGATCGCGTCTT CCATCG-CCGCAATCA CGA TGCT-GCGGTCGATGG TTTTCTCGCGAGCCA RPA0439 486265 - 485486 - | hypothetical protein TERM 380 486403 - 486380 - H 100 -11 -5.4833 | gap 1, opp_overlap 486401 486402 CCAGGTAATAAAAAA GAGCGGGTCCC GGA GGG-CCCACTC TCGATACGGATCGTA TERM 381 486435 - 486449 + H 84 -4.2 -5.14563 | opp_overlap 486435 GAGAATTTCGAAGTA GCGC CGATATA GCGC TTTTTTCCTCCAGCG TERM 382 486660 - 486686 + G 83 -15.8 -3.57119 | GGCAGGGCGATCCCG TCCGGCGCGCCG ACG CCGTGCGCCGGA TTTCCGACCTGTATA RPA0440 486599 - 487684 + | hypothetical protein RPA0441 487808 - 488656 + | hypothetical protein trmB 489466 - 488669 - | tRNA (guanine-N(7))-methyltransferase RPA0443 489960 - 489541 - | XRE family transcriptional regulator lnt 491771 - 490161 - | apolipoprotein N-acyltransferase TERM 383 490384 - 490355 - G 73 -9.3 -3.90318 | gap 1, overlap 490356 490379 CGATCACTGCAGAAA CGCCGGT-GTTCGC TGC GCGAACGAGCGGCA GGCCCTGCTCGATGG RPA0445 492913 - 491768 - | HlyC/CorC family transporter RPA0446 493487 - 492915 - | hypothetical protein TERM 384 493282 - 493318 + g 77 -12.1 -3.64703 | opp_overlap 493230, overlap 493283 ATCACCGCCAGCTCA GCGCCGCCGGTGTCGGC GTC GACTGCATCGGCGGCGG TTTCGATCGCGCGCA TERM 385 493283 - 493317 + g 75 -15.6 -2.78679 | opp_overlap 493230, overlap 493282 TCACCGCCAGCTCAG CGCCGCCGGTGTCGGC GTC GACTGCATCGGCGGCG GTTTCGATCGCGCGC RPA0447 494368 - 493487 - | phoH-like protein TERM 386 493960 - 493937 - G 79 -6.7 -4.58395 | gap 1, overlap 493902 493939 GTCACCGGGCAAAAA GCCG-AGCCG CTCGC CGGCTTCGAC CGCGGGCCGCGACAG miaB 495940 - 494549 - | tRNA-i(6)A37 modification enzyme MiaB TERM 387 495983 - 495966 - R 100 -7.7 -5.64421 | gap 1 AGCCCAAACAAAAAA CGCGCGTG TTC CA-GCGCG TTACCGTCACTTATA RPA0449 496719 - 496060 - | HAD-superfamily hydrolase subfamily IA, variant 3 TERM 388 496612 - 496589 - G 79 -8.8 -4.386 | gap 1, overlap 496591 GAACGGCCGAGAAAA CGCGCCGCGAC TTG GTC-CGGCGTG ATCGGATAGCCGTAG TERM 389 496781 - 496744 - R 81 -14.1 -3.59979 | opp_overlap 496774, overlap 496748 496750 CGGCTGCAGTTTAAA CTAATACGCCGCGAGCC GGTG AGCTCGCGGCGGATCGG CAGATGCGTCAGTTC TERM 390 496777 - 496748 - R 85 -15.7 -3.53031 | opp_overlap 496774, overlap 496744 496750 TGCAGTTTAAACTAA TACGCCGCGAGCC GGTG AGCTCGCGGCGGA TCGGCAGATGCGTCA TERM 391 496775 - 496750 - R 93 -18.3 -3.33865 | opp_overlap 496774, overlap 496748 496744 CAGTTTAAACTAATA CGCCGCGAGCC GGTG AGCTCGCGGCG GATCGGCAGATGCGT RPA0450 497238 - 496807 - | FUR family transcriptional regulator rimI 497786 - 497301 - | ribosomal-protein-alanine acetyltransferase TERM 392 497409 - 497424 + g 72 -5.4 -4.43307 | gap 1, overlap 497411 GGTACGATTGTAGAG TC-GCCG TGC CGGCTGA TTGTTTTCTTCCACC TERM 393 497702 - 497734 + g 70 -10.6 -3.53563 | opp_overlap 497699 497685 AAGCGGCATGAAGCT CGGCGA-GCTTCGGCG CGT CGC-GCAGCGTCGCCG TTTCGACCACGGTGT RPA0452 498504 - 497809 - | peptidase M22, glycoprotease TERM 394 498578 - 498603 + r 83 -11.9 -4.02022 | gap 1, overlap 498579 AACTATTCGGATGGG C-GGCATGGCGC GGA GCGTCATGCCTG TTTGTCGTGCTTGCC TERM 395 498579 - 498601 + r 86 -15.6 -3.59935 | overlap 498578 ACTATTCGGATGGGC GGCATGGCGC GGA GCGTCATGCC TGTTTGTCGTGCTTG RPA0453 499207 - 498641 - | NifU-like domain-containing protein RPA0454 499901 - 499353 - | hypothetical protein trpS 501145 - 500093 - | tryptophanyl-tRNA synthetase TERM 396 500378 - 500396 + g 100 -16 -4.67982 | overlap 500372 CAGGTTATCCGCCTC GGGCCTCG TCT CGAGGCCC TTTTCTTCGCTCGGC RPA0456 502757 - 501201 - | MviN family virulence factors, efflux protein TERM 397 502001 - 501971 - G 78 -14.6 -3.24232 | overlap 501969 501967 GGTTGGCGAAATACA GCCACGACACTGCC GCC GGCTGTGCCGAGGC GATGATGGCGCCGGC TERM 398 503045 - 503062 + G 79 -6.9 -4.64613 | overlap 503046 CGATGCACCGGCCCG ACCCGCA CGAT TGCGGGA TTTTCCTTATTTCTC TERM 399 504015 - 503991 - g 80 -9.2 -4.25104 | gap 1, opp_overlap 504006, overlap 503992 CCTCGGCTACGAAAA CGCCGGC-CGC CTCG GCGCGCTGGCG GCGGCCGAAGTGATC RPA0457 503032 - 504099 + | PfkB RPA0458 505875 - 504322 - | acyl-CoA synthetase TERM 400 504725 - 504752 + gT 87 -6.9 -5.03715 | gap 1, overlap 504727 TCGCCGGTATGCATC CAGCCGGCG-GC ATCCA GCACGTCGGCGG TTTTTTCCGCCTCGT RPA0459 506015 - 505524 - | fatty acid-CoA ligase TERM 401 506142 - 506096 - R 83 -15.8 -3.14132 | gap 1, overlap 506101 CGCCTCTTTCACGAA GCATAGCGCCGCCGGCGGGGC ATTGCG ACCCCGCCGACGGCGCGA-GA ACTCAGGCTGCCTGC TERM 402 506138 - 506101 - R 100 -25.6 -2.93723 | overlap 506096 CTTTCACGAAGCATA GCGCCGCCGGCGGGGC ATTGCG ACCCCGCCGACGGCGC GAGAACTCAGGCTGC RPA0460 507332 - 506145 - | beta-lactamase TERM 403 506202 - 506183 - G 71 -9.2 -3.88787 | CGAGAGCGGCATAAA CGCCGCGC TCGA ACGCAGCG AACGCCTCCAAGCAC TERM 404 508426 - 508452 + G 74 -5.8 -4.56597 | overlap 508420 508427 GAGGCGCTCGGTGAA GTCGATATCGGC GCC GCCTATGTCGAG TTTTTCGCCGAAGAG gabD1 508060 - 509553 + | succinic semialdehyde dehydrogenase TERM 405 509698 - 509733 + T 86 -15.5 -3.66732 | gap 1, overlap 509697 GGAAAGGGTATGGCG CCGTCGTCATGGCCGG CTTGT CCCGCCATGACG-CGG TTATTGAACTCGTTG RPA0462 510670 - 509765 - | enoyl-CoA hydratase TERM 406 510872 - 510917 + G 83 -12.6 -4.07568 | gap 2, overlap 510873 510875 510901 510902 GGACATCGACGCTGG CGGTGCAGCATCGCG-CG-GGC GTCA GCCGCGGCGCGCTGCTGCATCA TTTTCCGAGCCGCGA TERM 407 510873 - 510916 + G 79 -16.1 -3.04398 | gap 2, overlap 510872 510875 510901 510902 GACATCGACGCTGGC GGTGCAGCATCGCG-CG-GGC GTCA GCCGCGGCGCGCTGCTGCATC ATTTTCCGAGCCGCG TERM 408 510875 - 510914 + G 76 -15.1 -3.08032 | gap 2, overlap 510873 510872 510901 510902 CATCGACGCTGGCGG TGCAGCATCGCG-CG-GGC GTCA GCCGCGGCGCGCTGCTGCA TCATTTTCCGAGCCG RPA0463 510757 - 511386 + | TetR family transcriptional regulator RPA0464 511411 - 513036 + | putative long-chain fatty-acid-CoA ligase TERM 409 513078 - 513114 + T 77 -14.5 -2.9294 | gap 2, overlap 513080 GGACCGTTGCTTTGA CG-C-GAGCGGCGCGCC ATGTC GGCGTGCCGCTCAGTCG TGTGTGGGTGATCTA TERM 410 513080 - 513111 + T 78 -15.9 -2.70528 | gap 1, overlap 513078 ACCGTTGCTTTGACG C-GAGCGGCGCGCC ATGTC GGCGTGCCGCTCAG TCGTGTGTGGGTGAT RPA0465 514560 - 513127 - | transmembrane protein TERM 411 514454 - 514433 - G 72 -5.1 -4.43283 | opp_overlap 514447, overlap 514436 GGATAGAAATACAAA TAAGCGTCG ACCC CGAGGCTCA GCGCCTCTTCGTCGG TERM 412 514458 - 514436 - G 72 -5.4 -4.30253 | opp_overlap 514447, overlap 514433 TAGAAATACAAATAA GCGTCGACCC CGA GGCTCAGCGC CTCTTCGTCGGAGAT RPA0466 515383 - 514700 - | hypothetical protein RPA0467 516372 - 515386 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 413 515963 - 515977 + g 72 -11.4 -3.51934 | overlap 515962 TCCTGTGTCTGCCAT CGTCCG GCG CGGACG TATTTGTCGGCGCGG RPA0468 517196 - 516372 - | binding-protein-dependent transport systems inner membrane component AtsC 518023 - 517193 - | putative sulfate ester transporter; ATP-binding component. RPA0470 519174 - 518032 - | perplasmic binding protein of ABC transporter TERM 414 518771 - 518727 - G 74 -14.9 -3.01712 | GGTCTTTCTGGAAGA TCGCCGCGATCGCCACCACCG GCA CGTTGTTGGCCACCGCGTCGA ACGACTGCAGCGTGT RPA0471 519304 - 520116 + | creatininase TERM 415 521463 - 521495 + G 71 -9.1 -3.81755 | TGGAGCACCAGCCTG TTCGCCAACGTCC GGCTGTG GGACGGCGGCGAA TTCTATTTCAACCCT RPA0472 520350 - 522560 + | OmpA-like transmembrane domain-containing protein PA3602 524222 - 522591 - | ferredoxin-dependent glutamate synthase RPA0474 524516 - 525466 + | hypothetical protein TERM 416 525477 - 525489 + F 76 -9.1 -4.05788 | opp_overlap 525471, overlap 525466 CTTAAGGCACCGCCT TCGGC GGC GCCGA TTTCCTTTCGCCGCG RPA0475 525558 - 526559 + | putative oxidoreductase TERM 417 526874 - 526918 + F 76 -8.6 -4.11692 | overlap 526866 TGCTTAGGCGGCCCC CGCTA-GGTTCGCGCCCGGCTG TGT TAGTCGGGCGT-ACCCATGGCG TTTTCGAGGTCGATA TERM 418 527409 - 527441 + G 74 -12.7 -3.56092 | TGCTCGACAATTCGC CGTCGATGGGCGTGG GTG CTACGCCTACCGATG TTTCCGCGATGATCG RPA0476 526913 - 528244 + | hypothetical protein RPA0477 528378 - 528938 + | hypothetical protein RPA0478 528996 - 529292 + | hypothetical protein TERM 419 529294 - 529328 + T 75 -14.9 -2.72991 | gap 1 ATGATCCGCGCTGAG GCTGC-CGCGGCCCGG TTCG CCGGGCCGCTCGCTGC TGCTTGCGGATGTGA fabG1 530128 - 529346 - | short-chain dehydrogenase/reductase SDR RPA0480 530389 - 531453 + | acyl-CoA dehydrogenase TERM 420 531731 - 531684 - g 72 -8.3 -4.15222 | gap 1, overlap 531686 ACCTGGCCGAAGAAA TACGGCGGCCACG-AGCGCACC TTCCT GGAGCGCTACGTCGTCACCGAA GAGATGCGCATCGCC TERM 421 531729 - 531686 - g 73 -10.9 -3.6761 | gap 1, overlap 531684 CTGGCCGAAGAAATA CGGCGGCCACG-AGCGCACC TTCCT GGAGCGCTACGTCGTCACCG AAGAGATGCGCATCG TERM 422 531835 - 531860 + G 70 -11.2 -3.51329 | gap 1, opp_overlap 531830 531827 ACATCAAGATGGACA TTCTGCCGCGG ATCTG CCGCGGC-GAA TTGTGCTTCGCGATC TERM 423 532054 - 532043 - g 70 -3.6 -4.45544 | overlap 532044 532045 GCCCACCAAGGAAAA CCGC CGCC ACGG CCTCACCCAGTTCCT RPA0481 531480 - 532640 + | putative acyl-CoA dehydrogenase TERM 424 532750 - 532732 - g 73 -11 -3.68351 | opp_overlap 532731 532732 TCGCCACCATCGAAA TCCAGCGG CCG CCGCTGAA CTTCTTCGACATCTC TERM 425 533027 - 532991 - g 83 -15.8 -3.61398 | opp_overlap 532983 CTTCCGTGCCAAGAA GCCGATCATCGCGGCG GTGCA CGGCGCGGCGATCGGC GGCGGGCTTGGTCTC RPA0482 532674 - 533480 + | enoyl-CoA hydratase/isomerase TERM 426 533614 - 533581 - T 87 -17.5 -2.89564 | gap 1, opp_overlap 533536 533574 533571 GCCGGACGTTAGAGA TTCCGGGTTCGCTCGC TAT GCGAGCGC-CCCGGAA TGACGCGTGGTTAGG RPA0483 534389 - 533625 - | hypothetical protein paaG1 535180 - 534392 - | enoyl-CoA hydratase TERM 427 535294 - 535317 + r 71 -13.2 -3.10012 | opp_overlap 535294 CCGAAGGCGAAGCAA TCCAGCTTGG TGCA CCGAGCTGGA TTGCCTCGTCGGCTT RPA0485 536562 - 535357 - | urea/short-chain amide ABC transporter TERM 428 536625 - 536656 + H 100 -21 -4.14739 | overlap 536616 ATTGGCGCGATCATG CCGCATCGCTTGCT GCGC GGCAAGCGATGCGG TTTTCCGGTGAATGG TERM 429 536755 - 536784 + H 74 -14.3 -2.58663 | gap 1, overlap 536754 TCGCGATCATTGCTG CCCGGCGCGATGCG CTC CGCATCG-GCCGCG ATTCTAAACATCGGT TERM 430 537423 - 537407 - g 100 -7.9 -5.26316 | opp_overlap 537406 GGATGTCATAAAAAA CGCCGCA AAT TCCGGCG ATATGGTGACCCGGA RPA0486 536979 - 537704 + | nuclease RPA0487 537716 - 539233 + | peptidase M48, Ste24p TERM 431 539289 - 539309 + T 95 -19.7 -3.21912 | opp_overlap 539289 CGCGCCCACGAAAAA GGCCCGGCG AAT CGCCGGGCC TTGATGCCTTCGAAC TERM 432 539309 - 539289 - T 100 -19.7 -4.72272 | opp_overlap 539289 CGCGCCCACGAAAAA GGCCCGGCG AAT CGCCGGGCC TTGATGCCTTCGAAC RPA0488 540000 - 539338 - | CarD-like transcriptional regulator RPA0489 541035 - 540697 - | ferredoxin II RPA0490 541337 - 541110 - | hypothetical protein RPA0491 544691 - 541410 - | MgpS, ATP-dependent helicase RPA0492 546031 - 544994 - | hypothetical protein rpmB 546167 - 546472 + | 50S ribosomal protein L28 TERM 433 546510 - 546533 + F 100 -19.6 -4.4767 | overlap 546505 TGATTGAGATTTCGG CGGCCGGGTC GTTC GACCCGGCCG TTTTGTCGTGCGTGC RPA0494 546761 - 550042 + | sensor histidine kinase RPA0495 551214 - 550066 - | hypothetical protein cobT2 553143 - 551239 - | cobalt chelatase, pCobT subunit TERM 434 551542 - 551569 + g 73 -13.5 -3.29144 | gap 1, overlap 551555 CATCATCAGGATCTT GCG-CTGCTCGG GGCGG CCGAGCAGGCGC TTGTGCGCCCAGTCG RPA0497 553550 - 553140 - | GCN5-related N-acetyltransferase cobS2 554550 - 553555 - | cobalt chelatase, pCobS small subunit TERM 435 553689 - 553705 + g 75 -9.4 -4.07885 | opp_overlap 553700, overlap 553681 ACGCGAAGCCGATGT CGCCGA AGATA TCGGCG TTTTCCGACCAGGTG RPA0499 554830 - 555447 + | DedA family protein RPA0500 556156 - 555512 - | heat shock protein DnaJ, N-terminal TERM 436 556017 - 556070 + g 72 -13.7 -3.01712 | gap 1 TACCCGCGGCCCTTG GGCGCGCGGTGTGCGGCGCGGCTGGT GCA GCCCGGGGCGTCGCACATC-CGCACC TGTTCGCGCACGGCC RPA0501 556277 - 556546 + | BolA-like protein RPA0502 557925 - 556564 - | HlyC/CorC family transporter TERM 437 556889 - 556910 + g 70 -10.1 -3.73402 | ACCACCACGTCGTGC TCGTCGGAG ATGT CGCCGACGA TTTCCTCGAGGATGT TERM 438 557528 - 557546 + g 78 -10.2 -4.09511 | overlap 557529 TGCGACACCGGCTCC GGCTGGCG GAT CGCCAGCG TTTTCGGCACCTGTT TERM 439 557529 - 557545 + g 72 -13.7 -3.05224 | overlap 557528 GCGACACCGGCTCCG GCTGGCG GAT CGCCAGC GTTTTCGGCACCTGT aroB 559118 - 557973 - | 3-dehydroquinate synthase aroK 559740 - 559129 - | shikimate kinase RPA0505 559870 - 560016 + | hypothetical protein TERM 440 560093 - 560138 + G 81 -5.2 -4.84359 | gap 1, opp_overlap 560054, overlap 560087 560090 560096 560097 CCTGAAGCTCAGGCC GCGACGCTGCGCCCGGCTTCC TATTC GGACGCCGGGCTGACCGA-GC TTTTTCTCGACATGA TERM 441 560325 - 560352 + G 70 -6.2 -4.23707 | overlap 560316 560348 TTGCCACCTCCAGCG TGGCGCGGCG GTTGTCGG CGCTGCGGCA TTTGTTCCGGTTTCT TERM 442 560677 - 560660 - g 82 -12.7 -3.89614 | GGCAAGGGCGACAAA GAGCGGC TGGT GCCGCTC AACGCCGGCGCCAAA RPA0506 560033 - 561049 + | tyrosine recombinase XerD RPA0507 561631 - 561056 - | cytochrome b561 TERM 443 562270 - 562251 - g 70 -6.4 -4.25848 | overlap 562268 562269 AATCGGCCAGGAAAA GGGTTCCA CCAC CGAAACCC GGCTCCGGCATAATT accA 561895 - 562857 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 444 563256 - 563239 - g 73 -4 -4.63218 | TCGTGGTGAAGAAAA GCCCGC TTGTAC GCGCGC TGATGCTGACAGCTG RPA0509 563190 - 564665 + | hypothetical protein TERM 445 564707 - 564741 + T 81 -15.1 -3.05844 | gap 1 TCCATCGGCCAGTCA TTCCGGG-GCGCTCAC GTCA GTGAGCGAGCCCGGAA TCTTGCCGTCCGGGG TERM 446 564848 - 564816 - T 77 -14.2 -2.89191 | opp_overlap 564822, overlap 564822 CCAGAGCTCCAGACA GAAAAATGCCCGGC GCGAG GCCGGGCATTGCTC ATTCGCTTGATCTGC TERM 447 564842 - 564822 - T 100 -14 -5.03994 | opp_overlap 564822, overlap 564816 CTCCAGACAGAAAAA TGCCCGGC GCGAG GCCGGGCA TTGCTCATTCGCTTG TERM 448 564822 - 564842 + T 77 -14 -3.28984 | opp_overlap 564822 564816 CTCCAGACAGAAAAA TGCCCGGC GCGAG GCCGGGCA TTGCTCATTCGCTTG secA 567715 - 564875 - | preprotein translocase subunit SecA RPA0511 568058 - 568993 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 449 569041 - 569021 - T 81 -14 -3.55563 | opp_overlap 569021 AGTTGATTGTCGAAA TGGCCGGG CTCGT CCCGGCCA TTTTTCGTTGTCGGC TERM 450 569021 - 569041 + T 100 -14 -4.93365 | opp_overlap 569021 AGTTGATTGTCGAAA TGGCCGGG CTCGT CCCGGCCA TTTTTCGTTGTCGGC mutS 571809 - 569086 - | DNA mismatch repair protein TERM 451 570933 - 570987 + g 74 -12.1 -3.54543 | gap 2 CGCGGGTCGCCGGGT CGATCGCCATCGTCG-AGCCGGT-CGC CTC GCGTGCCGGCGGCGACAATGGTGGCCG TTTGCCGAGCTGGGT pcaF 571985 - 573193 + | beta-ketoadipyl CoA thiolase FarB 574934 - 573372 - | putative efflux pump protein FarB RPA0515 576107 - 574938 - | efflux pump protein FarA RPA0516 576585 - 576100 - | MarR family transcriptional regulator RPA0517 576775 - 577272 + | FUR family transcriptional regulator RPA0518 577437 - 578360 + | DMT family permease ispG 578344 - 579669 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 452 579786 - 579819 + T 72 -4.4 -4.58663 | gap 1, overlap 579788 579817 GCGCCGTTCTCTCCA CTCGTCTTGCCCGGG CTTGA CCCGGGCATC-CGCG TTTTTGAGCGCTCGT nha 581564 - 579912 - | Na+/H+ antiporter RPA0521 581747 - 583456 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) RPA0522 583474 - 583917 + | photopigment and puc activator RPA0523 584614 - 583928 - | hypothetical protein TERM 453 584029 - 583984 - G 72 -13.9 -3.01791 | overlap 583988 AGGCGGTGTTGAACA CGAACGATACGACGCCGTGCG CGGT CGCAGTGCGGCGGATCGTCCG GTCGGTGATGCCGAC TERM 454 584545 - 584603 + g 77 -16.1 -2.71268 | opp_overlap 584545 GCGGCCGCGAATACA CCAGG-CGAACGATCCGCGGCAGCTTC CGAAAGC GAAGCAGCAGCGGATCGT-CGTCCGGG TGCTCTGTCATGCGC TERM 455 584602 - 584545 - G 90 -18.5 -3.06696 | gap 1, opp_overlap 584545 GCGGCCGCGAATACA CCAGGCGAACGATCCGCGGCAGCTTC CGAAAGC GAAGCAGCAGCGGATCGT-CGTCCGG GTGCTCTGTCATGCG RPA0524 585548 - 584622 - | polyprenyl synthetase mtgA 585650 - 586360 + | monofunctional biosynthetic peptidoglycan transglycosylase rpmF 586522 - 586704 + | 50S ribosomal protein L32 RPA0527 586947 - 587579 + | hypothetical protein RPA0528 588057 - 587596 - | hypothetical protein TERM 456 588047 - 588057 + g 77 -5.4 -4.70921 | overlap 588037 GTCCCGGAATCCGAA TTGG TTT CCAA TTTCTTTATATTATC RPA0529 588149 - 589891 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) TERM 457 589995 - 589969 - T 84 -16 -3.06696 | opp_overlap 589954 CGGTCGTCGAAGACA TCCGGTTCTGAC ATG ATCAGAACCGGA AGATGCCTCAGCAGC RPA0530 590690 - 590022 - | polyhydroxyalkanoate synthesis repressor PhaR TERM 458 590385 - 590409 + g 70 -8.6 -3.98627 | gap 1 TTGCCGAAGGAAGGT GGTCG-GCAGA AGGT TCTGCCCGGCC TTGTTCTCTTGCTCG RPA0531 590894 - 592072 + | acetyl-CoA acetyltransferase TERM 459 592073 - 592111 + F 76 -15.5 -2.53876 | gap 2, overlap 592062 CTCGCGCGCGATTGA TC-G-CCGTGTGTCGCGAC GAC GTCGCGATACACGGACTGA TCAGTTGCAGTGCAA TERM 460 592162 - 592142 - f 100 -18.3 -3.56568 | opp_overlap 592142 GAACGATTGTTCAAA CGCCCGGCA GAT TGCCGGGCG TTTTTGCTTGATGTT TERM 461 592142 - 592162 + F 100 -18.3 -4.92777 | opp_overlap 592142 GAACGATTGTTCAAA CGCCCGGCA GAT TGCCGGGCG TTTTTGCTTGATGTT RPA0532 592255 - 592980 + | acetoacetyl-CoA reductase TERM 462 593306 - 593340 + G 72 -12.9 -3.15379 | gap 2, overlap 593314 593316 CACGCGCTGTATTTC CTGGCGCTCCGGCTGGC CCC GCCGGCCG-AG-GCCGG TCTGTTGAATTATCT RPA0533 593057 - 593923 + | hypothetical protein RPA0534 594464 - 593943 - | hypothetical protein hrpB 597071 - 594594 - | ATP-dependent helicase HrpB TERM 463 597852 - 597880 + G 85 -15.9 -3.66654 | TCGCGTTCTCGGATG CAGCGCGCGCGCG ACC CGCGCTGGCGCTG TTTGGCCTTGCGGTG RPA0536 597245 - 598297 + | acyltransferase RPA0537 599974 - 598415 - | acetyl-CoA hydrolase TERM 464 600264 - 600276 + r 73 -3.3 -4.8048 | overlap 600265 GCGCCAATAGCTGTT CGACG ATC CGTCA TTTTTCCTGTGAGCC TERM 465 600357 - 600322 - R 76 -14.1 -3.11569 | opp_overlap 600328, overlap 600328 GCACGCATCCAAAAG CGAAAACCTCCGGCA GGGCAT TGCCGGAGGTTTCCT GGAGGTCTCATGAAG TERM 466 600351 - 600328 - R 100 -13.9 -4.43272 | opp_overlap 600328, overlap 600322 ATCCAAAAGCGAAAA CCTCCGGCA GGGCAT TGCCGGAGG TTTCCTGGAGGTCTC TERM 467 600328 - 600351 + r 88 -14.6 -3.74251 | opp_overlap 600328 600322 ATCCAAAAGCGAAAA CCTCCGGCAG GGCA TTGCCGGAGG TTTCCTGGAGGTCTC TERM 468 600425 - 600444 + r 72 -2.2 -4.7497 | overlap 600427 600428 ATCACCCGCTGACCT TGTTCATA AGTA TATGAGTA TTTTTCCTGACTACA TERM 469 600661 - 600682 + r 93 -18.7 -3.19653 | opp_overlap 600635 600661, overlap 600653 CTGCGCGACGAAAAA CCCCGGCGG TTGC CCGCCGGGG TTCATCAGATTCTCG TERM 470 600682 - 600661 - R 100 -18.7 -4.72272 | opp_overlap 600661 600653, overlap 600635 CTGCGCGACGAAAAA CCCCGGCGG TTGC CCGCCGGGG TTCATCAGATTCTCG RPA0538 602168 - 600714 - | putative Omp2b porin TERM 471 601077 - 601087 + g 75 -6.8 -4.42386 | overlap 601073 601069 CGCACCACGGACGCC CCAG GCG CTGG TTTTCTCGATGCCGG RPA0539 602737 - 603270 + | MarR family transcriptional regulator RPA0540 604290 - 603265 - | hypothetical protein RPA0541 604854 - 605402 + | hypothetical protein RPA0542 606457 - 605405 - | hypothetical protein RPA0543 606652 - 607179 + | hypothetical protein RPA0544 607333 - 607716 + | hypothetical protein RPA0545 607713 - 608435 + | LrgB-like protein RPA0546 608530 - 608994 + | hypothetical protein RPA0547 610074 - 608998 - | hypothetical protein RPA0548 610257 - 611417 + | hypothetical protein ChrR 612076 - 611414 - | sensor protein ChrR, cytochrome cycA regulator RPA0550 612660 - 612073 - | RNA polymerase sigma factor RpoE TERM 472 613189 - 613246 + r 100 -11.4 -5.12617 | gap 3, opp_overlap 613196 613197, overlap 613196 CCGATCGAACGCGAG TCCAG--AATGGTCGTGGGGCCTGCCGGC GAT GCCGGCGGGCCCT-CGACTGTGAGTTGGA TTTTTTGCGTGGTTC TERM 473 613237 - 613196 - R 72 -12.1 -3.3334 | gap 1, opp_overlap 613189 613196, overlap 613197 AACGCGAGTCCAGAA TGGTCGTGGGGCCTGCCGGC GAT GCCGGCGGGC-CCTCGACTG TGAGTTGGATTTTTT TERM 474 613196 - 613237 + r 91 -20.9 -2.61943 | gap 1, opp_overlap 613196 613197, overlap 613189 AACGCGAGTCCAGAA TGGTCGTGGGGCCTGCCGGC GAT GCCGGCGGGCCCT-CGACTG TGAGTTGGATTTTTT TERM 475 613236 - 613197 - R 77 -15.6 -2.59683 | gap 1, opp_overlap 613196 613189, overlap 613196 ACGCGAGTCCAGAAT GGTCGTGGGGCCTGCCGGC GAT GCCGGCGGGC-CCTCGACT GTGAGTTGGATTTTT RPA0551 614170 - 613289 - | LysR family transcriptional regulator dctA1 614276 - 615583 + | C4-dicarboxylate transporter DctA TERM 476 615677 - 615638 - g 85 -17.8 -2.53213 | opp_overlap 615670, overlap 615641 GAACGCCCCAACCTA CAACCCGGCCTGCGGCGG CCTG CCGCCTCAGACCGCGCTG CACACCGGCCGCGCG TERM 477 615674 - 615641 - g 82 -15.9 -3.41878 | opp_overlap 615670, overlap 615638 CGCCCCAACCTACAA CCCGGCCTGCGGCGG CCTG CCGCCTCAGACCGCG CTGCACACCGGCCGC RPA0553 615621 - 616460 + | hypothetical protein TERM 478 616517 - 616479 - g 77 -5.1 -4.57837 | gap 1, overlap 616467 616480 ACACCGCGCGAAAAA TCGTCGCCCA-GCCGCTG AGTG CAGCGGCGTTCGCGCCGT TCGGCCAAGTGATCG RPA0554 616457 - 616969 + | ureidoglycolate hydrolase RPA0555 617614 - 617018 - | methyltransferase RPA0556 618315 - 617758 - | HNH endonuclease TERM 479 618417 - 618431 + H 71 -11.4 -3.53224 | opp_overlap 618412 618411 ATGCAGAAATGTCCC TCCCGC AGG GCGGGA TTTCAGCCCAAGCTG cysK 618596 - 619594 + | cysteine synthase, cytosolic O-acetylserine(thiol)lyase hemH 620583 - 619666 - | phosphoribosylaminoimidazole-succinocarboxamide synthase RPA0559 621571 - 620654 - | putative pirin TERM 480 621253 - 621267 + g 79 -11.4 -3.7948 | CGGTCATCAGGTTCA TCGCGC CGG GCGCGA TTTCCTGAATGTTGC TERM 481 621665 - 621608 - R 75 -14.9 -2.73364 | gap 1, overlap 621613 TCGTCATTGCAAGCA GCGAAGCGGCGAAGCAATCCAGACAC GTCTACT GAG-CTGGTTTGCTTCGCCACGCCGC AATGACGAGGCTCGT TERM 482 621660 - 621613 - R 73 -12.8 -3.13343 | gap 1, overlap 621608 ATTGCAAGCAGCGAA GCGGCGAAGCAATCCAGACAC GTCTACT GAG-CTGGTTTGCTTCGCCAC GCCGCAATGACGAGG MLYCD 623131 - 621701 - | malonyl-CoA decarboxylase RPA0561 623902 - 623297 - | hypothetical protein RPA0562 625342 - 623978 - | MmgE/PrpD family protein TERM 483 625582 - 625551 - g 100 -19.4 -3.17075 | gap 1, opp_overlap 625576 GCTTTCGCAATGGAA GCCGCGCC-GGCCCC AAT GGGGCCTGGCGCTGC GTATCACCCTCGCGG TERM 484 626402 - 626383 - g 70 -10.6 -3.53012 | overlap 626341 TCGGCCTGCGCCAAA GCGCTGCG CGAG CGCCGCGC GCCGCCGCCGCTCGG TERM 485 626506 - 626529 + G 70 -11 -3.59979 | opp_overlap 626506 CTCCCGGGCGATCAA GCCGAGCG GTTCTTCG CGCTCGGC TTTGCGATGGAGCAG RPA0563 625468 - 626625 + | hypothetical protein RPA0564 627091 - 626630 - | hypothetical protein TERM 486 626987 - 626943 - G 84 -14.4 -3.92592 | gap 2, opp_overlap 626950 626972 AGCGTGAAGATGAAA TCCGA-GACCGTGACGC-CGCG CTG CGCGTGCGCGACGATCTTCGGA TCGCGGGTCATGTCG TERM 487 627230 - 627285 + H 73 -8.3 -3.9941 | gap 3, opp_overlap 627233, overlap 627233 ATCTTGTTCCCGATC GAATCGTCGGCTGCGCTCTGCGT-GGGT GGG GCTCGATGC-GAGCGC-GCCGGCGCGTC TTTAGTTGTCACGAG TERM 488 627714 - 627690 - H 100 -9.9 -5.1356 | CGCGACGAAGAAAAA CGACGTGCAGC CCA GCAGCATGTCG AAAGGCAGCGCCAAG TERM 489 627762 - 627789 + H 93 -14.1 -4.11692 | ATTCGTCCACGATGA TGGCCCGCCGC CCCCAA GCTGCGGGCCA TTTTGCGGGTGGCTG TERM 490 627882 - 627865 - H 71 -9.1 -3.74158 | GCAATTATATGGAAA TCCGGGC AGGG GCCCAGA CCAGGAGCGACCGTG RPA0565 627895 - 629082 + | esterase, PHB depolymerase RPA0566 629211 - 629630 + | hypothetical protein TERM 491 629699 - 629666 - T 86 -16.7 -3.20901 | opp_overlap 629667, overlap 629669 AGCTGATCAATCCAA GGATCGGGCCGCGTC GAGG GACGTGGCCCGATCT TTATTGCTTAGGGTC TERM 492 629667 - 629698 + T 100 -22.4 -4.32951 | opp_overlap 629666 629669 GCTGATCAATCCAAG GATCGGGCCGCGTC GAGG GACGTGGCCCGATC TTTATTGCTTAGGGT TERM 493 629696 - 629669 - T 84 -17 -2.79684 | opp_overlap 629667, overlap 629666 TGATCAATCCAAGGA TCGGGCCGCGTC GAGG GACGTGGCCCGA TCTTTATTGCTTAGG RPA0567 630684 - 629707 - | AraC family transcriptional regulator TERM 494 629814 - 629794 - G 70 -6.1 -4.16943 | CCCGAGATTGGAAAA GCCGCAG GACAGCG CTGCAGC CGTGACCGTGGTGGG RPA0568 631610 - 630945 - | hydrolase RPA0569 632818 - 631700 - | hypothetical protein RPA0570 632974 - 633453 + | hypothetical protein regR 634133 - 633579 - | two-component transcriptional regulator RegR regS 635547 - 634225 - | periplasmic sensor signal transduction histidine kinase RPA0573 635655 - 636452 + | ABC transporter ATP-binding protein RPA0574 636449 - 637279 + | hypothetical protein TERM 495 637288 - 637310 + F 75 -13.4 -2.9838 | overlap 637286 637281 CGAGTAGGATGATTC CGGACAGGCC TGT GGACTGTCCG TGCTTACTTTTTACG RPA0575 637418 - 638746 + | polyhydroxyalkanoate depolymerase, intracellular TERM 496 639000 - 639010 + F 72 -4 -4.56597 | overlap 638982 638981 GCCCTGTATATTGGG CAAA TGA TTTG TTTTTGCGCCGAGCG RPA0576 639003 - 639836 + | hypothetical protein RPA0577 642052 - 640106 - | penicillin-binding protein 1A TERM 497 642176 - 642196 + H 84 -8.1 -4.4634 | overlap 642177 CTTGCTGCGCGCTCC GCCGCCGGC CTT GCCCGCGGG TTTCTTCTTCGGCTT TERM 498 642177 - 642195 + H 72 -11.6 -3.2672 | overlap 642176 TTGCTGCGCGCTCCG CCGCCGGC CTT GCCCGCGG GTTTCTTCTTCGGCT RPA0578 642505 - 642759 + | hypothetical protein RPA0579 643067 - 642855 - | hypothetical protein TERM 499 643325 - 643293 - R 93 -17.7 -3.3506 | overlap 643284 GTGAAAGCGGCAGAA GTCCGGGTCGCGAGT TCC ATTCGCGGCCCGGAC TGACATAGCGGACAG RPA0580 644579 - 643359 - | branched chain amino acid ABC transporter amino acid-binding protein RPA0581 645092 - 644730 - | hypothetical protein RPA0582 645175 - 645603 + | hypothetical protein TERM 500 645626 - 645657 + F 78 -11.6 -3.78067 | gap 1, opp_overlap 645623 645626, overlap 645630 645634 GACGTCAGGATAGGA CTGT-GGTAGCGCCG CTT CGGCGCTTCCTATAG TTTGCCTTCCATCTT TERM 501 645630 - 645652 + F 78 -14.8 -3.03781 | opp_overlap 645626 645623, overlap 645626 645634 TCAGGATAGGACTGT GGTAGCGCCG CTT CGGCGCTTCC TATAGTTTGCCTTCC TERM 502 645634 - 645648 + F 74 -12.8 -3.35344 | opp_overlap 645626 645623, overlap 645630 645626 GATAGGACTGTGGTA GCGCCG CTT CGGCGC TTCCTATAGTTTGCC RPA0583 645698 - 648439 + | sensor histidine kinase TERM 503 650386 - 650369 - g 73 -4.1 -4.64676 | overlap 650370 CGATCGTCAAGAAAA TCCTGGC TGCC ACCAAGA GCGACATCAAGGCGC RPA0584 648631 - 650967 + | RNA binding S1 RPA0585 652144 - 650990 - | chromate transporter TERM 504 651330 - 651283 - G 73 -12.7 -3.42583 | overlap 651286 GGAAGATACCGACAA GACCGATCGCCGCGCCGAC CAGCCCGGGC GCCGGTGCAGCGATCGCTC CCAGATAGGCAGCGA TERM 505 652187 - 652144 - R 74 -11.6 -3.39784 | gap 1, opp_overlap 652141, overlap 652142 CGAGCTTGAAGAACA CTCCCAGCACTTCACGCGGCG TGC CGCTGCGTGGC-TGCTGGGTG GTCGATGGCTTGGGC RPA0586 653103 - 652210 - | short-chain dehydrogenase/reductase SDR RPA0587 654614 - 653133 - | putative cationic amino acid transporter RPA0588 655335 - 654655 - | TetR family transcriptional regulator TERM 506 654863 - 654831 - G 75 -9.7 -4.12456 | overlap 654822 ACATCAGGCTGAAAA CCGGCAACGCCGC TTCGGCG GCGGAGCGGCCGG CGGGCCAATCCGAGG RPA0589 655430 - 657097 + | acyl-CoA dehydrogenase TERM 507 657223 - 657191 - T 100 -15.7 -4.35518 | gap 1, opp_overlap 657191 AAGGTCAGATCAAAA CGTCGATGCCCGGC GCAAAG GCCGGGCATC-ACG TGTATCAGGCGGACC TERM 508 657191 - 657223 + T 79 -15.7 -2.87132 | gap 1, opp_overlap 657191 AAGGTCAGATCAAAA CGTCGATGCCCGGC GCAAAG GCCGGGCATC-ACG TGTATCAGGCGGACC prc 658600 - 657260 - | putative carboxyl-terminal protease TERM 509 657477 - 657509 + g 72 -15 -2.71483 | gap 1, overlap 657484 657489 CCGTGCAGCGCGCTT TC-GCGGATCAGCGG GCCG CCGCTGATCTGCTGA TCCTTCGGCGCCTCT glnD 661613 - 658764 - | PII uridylyl-transferase TERM 510 659082 - 659127 + g 73 -14 -3.18274 | gap 2, opp_overlap 659065 GCGCAGCTTGGCCTT GCTGCCGCTGCTCGCGCGGCGG GCGA CCGCCTCG-G-GTAGCCGCAGC TTGCCTTCGAGTACC TERM 511 661356 - 661406 + g 72 -11.7 -3.54424 | opp_overlap 661343 661341 661339, overlap 661395 CAGCCGCTCGGCGCA GCGCCG-GCCGTGGCGGTCGCGCAG CAA CTGCGCTTCGGCCTCGGTGCGG-GC TTTGGCCAGCTCCGC TERM 512 661428 - 661472 + g 76 -6.4 -4.56775 | overlap 661419 661431 CAGCTCCGCCTTCAT CAGCATCGCCAGCG-CGGTGCG GAA CGCGGCGTCGTTGCCGGTG-TG TTTTTCGGCCAGCGT TERM 513 661431 - 661470 + g 73 -9.2 -3.90048 | gap 1, overlap 661419 661428 CTCCGCCTTCATCAG CATCGCCAGCG-CGGTGCG GAA CGCGGCGTCGTTGCCGGTG TGTTTTTCGGCCAGC TERM 514 662978 - 662936 - g 73 -13.3 -3.2794 | gap 1 GGTGATCCAGATCAA GGTC-GCCCTCGGCCTCGGC AAAG GCCGCGACCGCGTGCTGACC TGCGACCTGACCAAG argJ 661788 - 663029 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein RPA0593 663026 - 663523 + | hypothetical protein mutT 663531 - 663932 + | putative mutator protein mutT RPA0595 664933 - 664109 - | hypothetical protein TERM 515 664873 - 664851 - G 74 -10.4 -3.78775 | overlap 664852 CGGTCGAGCAGGAAA GGCGCCGGGC CGA GCGCGGCGGC GCGGTGCAGCCGTGC RPA0596 665259 - 664960 - | hypothetical protein RPA0597 665365 - 666180 + | phosphoribosyltransferase RPA0598 666223 - 666498 + | glutaredoxin GrxC RPA0599 666495 - 667370 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 516 667567 - 667535 - g 72 -8.3 -4.15222 | gap 1 ATCGTCGGCAAGAAA GGCCGCGGCCGCGC GCCCGA GC-CGGCTGCCGCC GAACCCGCCGCGACC RPA0600 667367 - 667861 + | hypothetical protein RPA0601 668083 - 668520 + | DMT family permease RPA0602 669420 - 668521 - | DMT family permease ubiG 670330 - 669548 - | 3-demethylubiquinone-9 3-methyltransferase TERM 517 669903 - 669924 + g 70 -10.1 -3.73224 | ATCGCCAGCACGATG TCGAACCGC TCAC GCGGGTCGA TTTCCTCGACCATGA lysC 670503 - 671756 + | aspartate kinase TERM 518 671884 - 671896 + F 81 -6.9 -4.72029 | opp_overlap 671881, overlap 671881 GCGCTGACAGGACGG CTGGC AAG GCCGG TTTTGTTGCGTTGCG TERM 519 672645 - 672671 + G 72 -13 -3.17212 | opp_overlap 672644 CGATCCACAAAACCG GTGCGGTGCTGT CCG ACGGCATCGCGC TTGGTCACGTCGTGC ptsP 671957 - 674359 + | PTSINtr with GAF domain, PtsP TERM 520 674364 - 674382 + F 83 -11.6 -4.0162 | TCGCTTTGTAGCGAC GCGGCTGC CCC GCCGCCGC TTTGTCGTCTCACGC prfA 674416 - 675501 + | peptide chain release factor 1 TERM 521 675558 - 675591 + G 81 -16.1 -3.13403 | gap 1, overlap 675557 CGGCAATTCCAGGAC GC-GGGCATCGAGTCC GCC GCACTCGATGCCCGGC TGTTGGTCGGCGAGG hemK 675498 - 676367 + | modification methylase, HemK family TERM 522 676653 - 676680 + F 74 -12 -3.53224 | gap 1, opp_overlap 676649 676653 GGCTCGATGAATTGA TCCGGCCGGCGGT GTA ACGGCCG-CCGGA TTTGGAGAACGCGTC RPA0608 676819 - 677514 + | hypothetical protein TERM 523 677556 - 677577 + T 100 -15.1 -4.13654 | opp_overlap 677556 677553 677551 677548 GATCAAATCAGACGA GGCCGCGCC GGTT GGTGCGGCC TTTGTCGTTTCGGCA RPA0609 678396 - 677617 - | methyltransferase type 11 TERM 524 678278 - 678313 + g 72 -13.3 -3.1505 | gap 1 CCGAGCACGCGATCG CCGCGCGCATCCGGCC ATCGC GACTGGATGC-CGCGG TTGATCAGCCGTCGT RPA0610 678565 - 679332 + | hydroxyacylglutathione hydrolase RPA0611 679329 - 679766 + | hypothetical protein RPA0612 680825 - 679887 - | PfkB RPA0613 681754 - 680822 - | NUDIX hydrolase RPA0614 682256 - 681759 - | histidine triad (HIT) protein TERM 525 683916 - 683955 + G 74 -9.8 -3.89346 | gap 1 GTGGTGGCAGCAGCA GTCGCGGCGGTGCGTCCGC TTC GCTGGCGC-CGGCCCCGGC TTTGTCCGCTCCCAG dnaX 682649 - 684520 + | DNA polymerase III subunits gamma and tau RPA0616 684542 - 684862 + | hypothetical protein TERM 526 684841 - 684859 + F 74 -13.8 -2.86413 | opp_overlap 684808, overlap 684839 684838 684857 CGGCCTCGGCCTGCC GCCCGGGC TCG GCCTGGGC TAGTCTTTGGCCTTT TERM 527 685184 - 685164 - g 77 -7.5 -4.431 | overlap 685165 CATCGATTCACAAAA CCCGTGCAC GGT GTGCACCGA TCCGCGACGGGATTC TERM 528 685519 - 685551 + G 77 -10.6 -3.78934 | gap 1, opp_overlap 685519 GACTATCTTGACGAA GGTACGCTGTCGGCG GCGA TGC-GACAGCGCACC TTGTTCTGACCCAAC recR 684958 - 685560 + | recombination protein RecR RPA0618 685580 - 686008 + | hypothetical protein ampG 687347 - 686049 - | major facilitator transporter RPA0620 688728 - 687496 - | hypothetical protein def 688848 - 689375 + | peptide deformylase fmt 689454 - 690386 + | methionyl-tRNA formyltransferase TERM 529 690377 - 690423 + F 75 -13.6 -3.09516 | CGCGAAGGGTGTGCG GGTGGGTTAGGGCTGAGGCGCA GCC TGAGCCTGAGCGCCACCCCACC TTCGGTCGTCACCAC truA 690564 - 691310 + | tRNA pseudouridine synthase A TERM 530 691559 - 691508 - T 83 -14.4 -3.53012 | gap 1, opp_overlap 691491 691509 691512 691544, overlap 691509 691511 GCGCTGTTTTCCAAA GCACCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGATGT TGTGGCGAACTCAGC TERM 531 691558 - 691509 - T 86 -17.9 -2.71712 | gap 1, opp_overlap 691491 691509 691512 691544, overlap 691508 691511 CGCTGTTTTCCAAAG CACCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGATG TTGTGGCGAACTCAG TERM 532 691509 - 691558 + T 84 -15.7 -3.29511 | gap 1, opp_overlap 691509 691508 691511, overlap 691491 691512 691544 CGCTGTTTTCCAAAG CACCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGATG TTGTGGCGAACTCAG TERM 533 691556 - 691511 - T 77 -14.7 -2.90496 | gap 1, opp_overlap 691491 691509 691512 691544, overlap 691509 691508 CTGTTTTCCAAAGCA CCGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCGA TGTTGTGGCGAACTC TERM 534 691512 - 691555 + T 79 -16 -2.52742 | gap 1, opp_overlap 691511 691509 691508, overlap 691491 691509 691544 TGTTTTCCAAAGCAC CGTCATTCCGGG-GCGCGCGT GAA ACGCGCGAACCCGGAATCCCG ATGTTGTGGCGAACT TERM 535 691544 - 691600 + T 71 -13 -3.07994 | gap 1, opp_overlap 691511 691509 691508 691573, overlap 691512 691509 691586 691587 CGTGAAACGCGCGAA CCCGGAATCCCGATGTTGTGGCGAACT CAGC AGTGC-CCTGAACCGCGGGATTCCGGG TTCGCTCGCCTTGCG TERM 536 691586 - 691637 + T 71 -10.9 -3.45634 | gap 3, opp_overlap 691573, overlap 691544 691587 CAGCAGTGCCCTGAA C-CG-CGGGATTCCGGGTTCGCTCGC CTT GCGAGCGC-CCCGGAATGACGGCGTG TTGATTACTTGAAGT TERM 537 691587 - 691635 + T 82 -14.6 -3.29727 | opp_overlap 691573, overlap 691544 691586 AGCAGTGCCCTGAAC CG-CGGGATTCCGGGTTCGCTCGC CTT GCGAGCGC-CCCGGAATGACGGCG TGTTGATTACTTGAA dapE 692805 - 691642 - | succinyl-diaminopimelate desuccinylase RPA0625 693278 - 692805 - | hypothetical protein dapD 694142 - 693297 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase RPA0627 695028 - 694327 - | haloacid dehalogenase superfamily hydrolase RPA0628 696146 - 695025 - | hypothetical protein argB 697042 - 696146 - | acetylglutamate kinase RPA0630 697535 - 697167 - | hypothetical protein RPA0631 698185 - 697535 - | GTPase EngB TERM 538 698279 - 698331 + r 83 -17 -2.63596 | gap 1, opp_overlap 698263 698287 CGGAATCGCCGTGCA GCTCGAAATTCCAGGGCTGCGCGCC TCAC GGCACGCAGCCC-GGAATGACGAGG TCGTCTCAGGTCGGC TERM 539 698323 - 698287 - R 100 -21 -3.57144 | gap 1, opp_overlap 698279, overlap 698263 CCGTGCAGCTCGAAA TTCCAGGGCTGCGCGCC TCAC GGCACGCAGCCC-GGAA TGACGAGGTCGTCTC TERM 540 698331 - 698346 + r 84 -2.4 -5.29445 | GCCCGGAATGACGAG GTCGTC TCAG GTCGGC TTTTTCTTCTTGGCG RPA0632 700205 - 698337 - | putative inner membrane protein translocase component YidC TERM 541 699619 - 699642 + g 70 -11.8 -3.39668 | gap 1 TCGACGGTGATCTGG CGGCGGAAGGT GAG ACCTTC-GCCG TTGTCCCATTTCAGC TERM 542 700085 - 700110 + g 76 -8.9 -4.2349 | gap 1, overlap 700061 GCTTGGCGGCCTGCT GCTGCGC-CTGC TGG GCGGCGCGCTGC TTTTCCATCTGCGGG rnpA 700563 - 700222 - | ribonuclease p protein component (protein c5) TERM 543 700409 - 700424 + g 74 -2.5 -4.71426 | CGAATTCGATTGCGT TCGGT CGCGGT GCCGA TTTTCTTGGTCACGG rpmH 700721 - 700587 - | 50S ribosomal protein L34 RPA0635 701052 - 702530 + | sensor histidine kinase RPA0636 703479 - 702970 - | hypothetical protein RPA0637 704834 - 703506 - | hypothetical protein RPA0638 707313 - 704911 - | hypothetical protein TERM 544 706204 - 706187 - G 95 -4.7 -5.41143 | overlap 706188 CAGTGCGCAAAAAAA TCCGCCA GGGC CGGCGGC AAGATTTTGAGCATG TERM 545 707602 - 707643 + H 76 -11.5 -3.72695 | gap 1, overlap 707598 707608 707612 CGATGCCGTCGTGGT CGCGCGCGGCCCGTTTCGCG TTG CGCGGAGCGG-CTGTTTGCG TTTCGTCGCCGCGCT TERM 546 707608 - 707637 + H 79 -10.7 -3.87149 | gap 1, overlap 707598 707602 707612 CGTCGTGGTCGCGCG CGGCCCGTTTCGCG TTG CGCGGAGCGG-CTG TTTGCGTTTCGTCGC TERM 547 707612 - 707634 + H 72 -13.4 -2.70419 | overlap 707598 707608 707602 GTGGTCGCGCGCGGC CCGTTTCGCG TTG CGCGGAGCGG CTGTTTGCGTTTCGT TERM 548 707691 - 707672 - H 72 -7.9 -4.11484 | opp_overlap 707672 CTCAAGGCGGCAAAA TTTGCCC GCTGGT GGGCAAA TTGTTCCGCATAAGT TERM 549 708312 - 708350 + G 76 -15.3 -2.9062 | gap 1, opp_overlap 708302, overlap 708309 GCAATCTGCTCGAAG CGGCGATGCAGCGGCTGC CCGA GCAGCAGCGG-ATCGCCG TGATTCTGTCGTACC sigE 707816 - 708514 + | RNA polymerase sigma factor fliC 708657 - 709481 + | putative flagellin TERM 550 709490 - 709520 + F 74 -14.7 -2.56271 | gap 1, overlap 709489 709486 709491 CGGCTGATGACGTCT GA-TCCGGGCCGGC ACCG GCCGGCCCGGCCTC CTCTTGTGATCGGAC TERM 551 709491 - 709518 + F 72 -14 -2.81872 | overlap 709490 709489 709486 GGCTGATGACGTCTG ATCCGGGCCGGC ACCG GCCGGCCCGGCC TCCTCTTGTGATCGG fliD 709543 - 711258 + | flagellar hook-associated protein 2 (FliD, filament cap protein) RPA0642 711258 - 711650 + | hypothetical protein RPA0643 711650 - 712045 + | hypothetical protein TERM 552 712078 - 712099 + F 75 -12.3 -3.57144 | GCCAGCGATTCTGGC GCGACGCGT TCCA ACGCGTTGC TTTCCGGATCAGCCA flgD 712294 - 713091 + | basal-body rod modification protein flgD flgE 713111 - 714376 + | flagellar hook protein FlgE RPA0646 714382 - 714639 + | hypothetical protein RPA0647 714655 - 715116 + | hypothetical protein TERM 553 715286 - 715256 - g 75 -13.2 -3.46982 | overlap 715254 GCTACACCAAGAAGA CCGCCGGTCAGGCC AGC AGCGTCACCGGCGG GGTCGGCACCGGTGT flgK1 715138 - 716901 + | flagellar hook-associated protein 1 (HAP1, FlgK protein) flgL 716917 - 717828 + | flagellar hook-associated protein FlgL badK 718624 - 717848 - | cyclohex-1-ene-1-carboxyl-CoA hydratase aliA 720295 - 718652 - | cyclohexanecarboxylate-CoA ligase aliB 721503 - 720352 - | cyclohexanecarboxyl-CoA dehydrogenase TERM 554 720883 - 720871 - G 72 -4.7 -4.57341 | overlap 720873 AACGTTCTCGAAAAA CAGCG AGC CGCGG CCGATCGCACGCTGG badI 722350 - 721568 - | 2-ketocyclohexanecarboxyl-CoA hydrolase TERM 555 722063 - 722089 + g 77 -12.2 -3.67597 | GGCGATCACCGGCTT CGGCACGTCGCG GAT CGCGGTGTGCAG TTCTTCCATCGGCAG TERM 556 722173 - 722210 + g 73 -12.5 -3.40403 | opp_overlap 722168, overlap 722176 722177 CGGTGCAGAAGGCGC GGTCGCCGGCGCCAGCG AGCA CGATCGCGCCGACGTCC TTGTCGTAGCCGGCC badH 723148 - 722381 - | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase badR 723271 - 723798 + | benzoate anaerobic degradation transcription regulator BadR badC 723872 - 724891 + | putative alcohol dehydrogenase TERM 557 725046 - 725012 - f 78 -9.8 -4.07568 | overlap 724996 CGCTGGGCCGGAAAA TGGCCGGCAGCGCGAC CCG GCAGAGCCGCCGGGCA GGGAGGACGACCGGC badD 725062 - 726246 + | benzoyl-CoA reductase subunit TERM 558 726395 - 726359 - g 77 -16.5 -2.72344 | opp_overlap 726371, overlap 726371 CGCCAGCGCCAAGGA GCGCGGCGAGAAGGTCG CTG CGACCTTCGTGCCGGGC AATCTCAACGAGCTG TERM 559 726524 - 726510 - g 73 -3.5 -4.60041 | overlap 726511 ATGGAGGCGGAAAAA CTCGG CCATT CCGAA GACGTCTGCACCTAC TERM 560 727546 - 727526 - g 70 -10.4 -3.69702 | gap 1 GATGATCGAACAGAA GCGC-GCGG GCTT CCGCGGCGC CGCCTGAGGAGCGGA badE 726243 - 727553 + | benzoyl-CoA reductase subunit badF 727565 - 728878 + | benzoyl-CoA reductase subunit badG 728971 - 729804 + | benzoyl-CoA reductase subunit badA 729921 - 731495 + | benzoate-CoA ligase badB 731512 - 731757 + | ferredoxin badM 732276 - 731806 - | putative transcriptional regulator, badM badL 732810 - 732331 - | acetyltransferase hbaH 733631 - 732909 - | putative ABC transporter subunit, ATP-binding component hbaG 735415 - 733628 - | ABC transporter ATP-binding protein TERM 561 733970 - 734017 + g 100 -21.2 -3.62597 | gap 1 GCCGGCGATGGTGTC GCCGCGATCGG-CGAGCCCGGCG ACC CGCAGGGCGCGGTCGACCGCGGC TTGTTCGCGCGTCCG hbaF 736278 - 735418 - | inner-membrane translocator hbaE 737542 - 736364 - | putative ABC transporter subunit, substrate-binding component TERM 562 737568 - 737588 + r 85 -3.2 -5.2853 | overlap 737570 737571 CCCTCGATCTTCCCT TCGCGAGC GATCA GCTCGTCA TTTTGTTTTTCGGTA hbaA 739338 - 737719 - | 4-hydroxybenzoate-CoA ligase TERM 563 738707 - 738697 - G 75 -4.6 -4.64766 | overlap 738699 738700 CCCATAGGCGAAAAA CAGC TTG GCCG CCGAGAACACCACGT TERM 564 739290 - 739318 + g 73 -12.4 -3.41602 | opp_overlap 739311 CCCGGCCTTCCGCCA CGTTGCGGTCGA CGAAA TCGACCGCCGCG TTGTAGTCGCGTAGC hbaB 739505 - 739996 + | 4-hydroxybenzoyl-CoA reductase, first of three subunits hbaC 739993 - 742326 + | 4-hydroxybenzoyl-CoA reductase,second of three subunits TERM 565 742931 - 742904 - g 70 -13.4 -3.04144 | gap 1 GCTGTATGTCGAAGA CGGCCG-GGCGCA TCT TGCGCTGCGGCCG GGCGAGGTCGTGGTC hbaD 742323 - 743306 + | 4-hydroxybenzoyl-CoA reductase, third of three subunits hbaR 744056 - 743331 - | hydroxybenzoate anaerobic degradation regulatory protein HbaR RPA0674 744248 - 745360 + | alcohol dehydrogenase RPA0675 745396 - 746217 + | alpha/beta fold family hydrolase TERM 566 747520 - 747549 + G 70 -13.5 -3.01712 | overlap 747509 747545 TGGTCGAGCCAGGCT CGTGCTTCGCCGG CACG CTGGCGGAGCTCG TGTTCGCCGCCGACC RPA0676 746346 - 748040 + | enoyl-CoA hydratase TERM 567 748111 - 748153 + F 76 -15.7 -2.52896 | gap 1, opp_overlap 748115 748119, overlap 748115 748119 TCATTGCGAGCGTAG CGAAGCAATCCAG-GACCGC GCGC GAGGCCGCTGGATTGCTTCG TCGCTTCGCCCCTCG RPA0677 748211 - 749662 + | hypothetical protein TERM 568 749710 - 749736 + F 100 -18.7 -4.18494 | opp_overlap 749699 TAGACCTATGTCTAA GGCCGCTCCGC CGAAA GCGGGGCGGCC TTTTGCATGCCGGTC gltA 749989 - 752973 + | trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein RPA0679 755030 - 752997 - | hypothetical protein TERM 569 753048 - 753080 + g 77 -13.4 -3.57144 | gap 1, opp_overlap 753032 753031 CTGCGGCTTCGGTCC GTCGCCGCGCACCGG GCGG CGGGTGC-CGGCGGC TTTGCCGGTCCCAGG TERM 570 753273 - 753304 + g 71 -14.4 -2.80816 | gap 1 CGGTTCACTGGCGCC GTGGCG-CACCCCGC GTA GCGGGTTGACGCCGC TGTGATACATCGCAG RPA0680 755714 - 755097 - | TetR family transcriptional regulator RPA0681 755856 - 756890 + | membrane permeases, cation efflux pump RPA0682 756887 - 759601 + | ABC transporter ATP-binding protein RPA0683 759598 - 760731 + | ABC transporter permease RPA0684 760918 - 760739 - | hypothetical protein RPA0685 761061 - 761936 + | IclR family transcriptional regulator TERM 571 762048 - 762008 - f 76 -9.1 -4.0641 | gap 3 CCGCAGGGAGAGAAA CCTGAACGGCGCGCCGC-GC GGGA GCTGCGGC-CGC-GTTCACG CTTGGACTGACGTCG RPA0686 762097 - 763071 + | hypothetical protein RPA0687 763768 - 763121 - | hypothetical protein TERM 572 763562 - 763544 - G 74 -8 -4.29508 | ATGCACACGAATAAA GCCCGGCA CGT CGCCGCGC GGCGAACAGTCGAGC phnN 764333 - 763749 - | phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN TERM 573 764205 - 764192 - G 77 -6.7 -4.56597 | overlap 764196 CGCGGCGCGCAAAAA CGATC GCCG GATCG TCGGCACAGAGCGTG phnM1 765466 - 764330 - | phosphonate utilization (C-P lyase) component phnL 766209 - 765505 - | phosphonate ABC transporter ATP-binding protein phnK 767033 - 766215 - | phosphonates transport ATP-binding protein phnJ 767904 - 767026 - | phosphonate metabolism PhnJ phnI 768998 - 767901 - | phosphonate metabolism TERM 574 768404 - 768387 - G 70 -8.3 -3.96624 | opp_overlap 768389 GAGCGCCAGCAGAAA GCCCTCG TCGG CGCGGGC GAGGTTCTGCAGCCG phnH 769604 - 769002 - | carbon-phosphorus lyase complex subunit phnG 770080 - 769607 - | phosphonate metabolism PhnG TERM 575 769649 - 769667 + g 85 -13.1 -4.08767 | GAAATCGACTTTGGT GGCCGCC GTCTG GGCGGCC TTTTCGGCGCGTGCG RPA0696 770192 - 770920 + | GntR family transcriptional regulator phnE1 772111 - 771245 - | phosphonate ABC transporter permease phnE2 772989 - 772108 - | phosphonate ABC transporter permease TERM 576 773039 - 773007 - R 86 -17.8 -2.62184 | gap 1, opp_overlap 773010 GGGTGTCCGACATGA CG-ACGTGGGCGACC GGTC GGCCGCCCACGTTCG ATGAAGTGCGAGGAT TERM 577 773010 - 773035 + r 84 -16.1 -3.06796 | opp_overlap 773007 TGTCCGACATGACGA CGTGGGCGACC GGTC GGCCGCCCACG TTCGATGAAGTGCGA phnD 773966 - 773058 - | phosphonate ABC transporter periplasmic phosphonate-binding protein TERM 578 774043 - 774005 - R 77 -13.2 -3.58037 | gap 2, overlap 773996 774007 GATGAACGGTCGAAA CACGGCAACCGCACGCGG TCGCG CCGCACGCGG-TGCCG-G ATAGGGGAGACGGCG TERM 579 774042 - 774007 - R 91 -16.9 -3.36569 | gap 1, overlap 773996 774005 TGAACGGTCGAAACA CGGCAACCGCACGCGG TCGCG CCGCACGCGG-TGCCG GATAGGGGAGACGGC phnC 774888 - 774076 - | phosphonate ABC transporter ATP-binding TERM 580 775471 - 775518 + G 71 -12.7 -3.28924 | gap 1, opp_overlap 775456 TCGGCACCGGCGCTG TGGTGGCGGCCGGCGCGATCGT CACCC GTGA-CGTGCCGGCCTACACCA TTGTGGCCGGCAATC RPA0701 775029 - 775748 + | putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) phnM2 775745 - 776938 + | phosphonate ABC transporter permease RPA0703 776961 - 777665 + | hypothetical protein RPA0704 778642 - 777662 - | hypothetical protein TERM 581 778869 - 778841 - H 83 -13.2 -3.89695 | GTCCGATAAAGATAA GCGA-CCGGCGCCG ACG CGGC-CCGGATCGC ACCACGAGGAACCGC RPA0705 778886 - 779080 + | hypothetical protein RPA0706 779578 - 780054 + | endonuclease III cutA 780355 - 780032 - | putative periplasmic divalent cation resistance protein CutA TERM 582 781120 - 781092 - g 71 -9.4 -3.78934 | overlap 781073 781093 CGGCTGCCACAACAA CCGCCGCGCCGG CGCGC CCGGCACTGCCG CAGGAGCGTCGCGAG RPA0708 780767 - 781288 + | hypothetical protein TERM 583 781888 - 781846 - g 75 -9.6 -4.11216 | opp_overlap 781846 GGTCGATGTCGAAAA GCTGCCGAACGCCGGCGCCA CCG CGATGCCGGCGCTGGTCGGC TTCGATCTCAACTTC RPA0709 781403 - 781948 + | hypothetical protein RPA0710 781991 - 782251 + | hypothetical protein RPA0711 783169 - 782498 - | nitroreductase family protein cobT 784251 - 783196 - | putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 584 784342 - 784294 - H 74 -10.2 -3.68619 | gap 1 CGCAACTGACTCAAA CGCGGAAGCCCGGTCAACACCAC CTTC GCGTTGTTGACCCG-CAACCGCG TCGCAGCTAGCGTGC RPA0713 784566 - 785087 + | hypothetical protein cobU 785084 - 785614 + | bifunctional cobinamide kinase, cobinamide phosphate guanylyltransferase protein cobW 785618 - 786622 + | putative cobalamin synthesis protein cobW TERM 585 787257 - 787287 + G 72 -8.9 -4.07568 | gap 1, overlap 787258 787266 GCGCGACGATTGCCC GCCACCGGCGCGGC CGAT GCCG-GCCGCTGGG TTTTGGCCGGCCGAG TERM 586 787454 - 787467 + G 74 -5.2 -4.57073 | CCAGCCTGAAGGATG CGCG CTCGAT CGCG TTTTTACGCAGCGTG TERM 587 788291 - 788310 + G 70 -10 -3.64912 | ATCCGGAGCTGCCGC CGCCGCAT CACT ATGTGGCG TTCTATCTGTGGCTG TERM 588 789825 - 789789 - g 100 -10.6 -4.57569 | overlap 789790 CGAGCTGGCGAAAAA GCAGGCCGGCGCGCGG GTGTT CGGCGCGCGGCCCGGC AGTTACGGAGCCGGG TERM 589 789823 - 789790 - g 75 -13.8 -3.3422 | gap 1, overlap 789789 GAGCTGGCGAAAAAG CAGGCCGGCGCGCGG GTGTT CGGCGCGC-GGCCCG GCAGTTACGGAGCCG cobN 786757 - 790506 + | cobaltochelatase TERM 590 791021 - 790988 - g 74 -8.1 -4.25283 | gap 1, overlap 790989 ACTGCTCGATGAAAA GCCGGCCGACAAGCAC GTT GTGATCACCGGCCG-C AATGCCCACCCGGCG cobO 790503 - 791129 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 591 791660 - 791606 - g 77 -4.2 -4.82901 | gap 3, overlap 791607 CTTTCTCGACAAAAA GGCGGCGC-TG-ATGCCGCACG-TGCT GGAC AGCTTCGCGCAGCTCGCACGCGACGCC GATATCGTGCTGGTC cobQ1 791277 - 792761 + | cobyric acid synthase cobD 793705 - 792734 - | cobalamin biosynthesis protein CobD RPA0720 794519 - 793707 - | putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components TERM 592 794246 - 794258 + g 77 -10.5 -3.91196 | TCTGCTTCAATAGTT CGCGC GTG GCGCG TTTGGTGTATCTGCC cobC 794583 - 795572 + | putative cobalamin biosynthetic protein CobC fecE 796363 - 795584 - | putative iron(III) dicitrate ABC transporter, ATP-binding component FecE RPA0723 797385 - 796360 - | hemin ABC transporter, permease component TERM 593 796764 - 796732 - G 72 -12 -3.59262 | gap 1, overlap 796733 796755 GCTGAGAGCGCGAAA TGCGGCGCGCTGGCT GAAC AGC-AGCACGCCGCC GGCGACGATGAACGG TERM 594 796763 - 796733 - G 75 -15.5 -2.75343 | gap 1, overlap 796732 796755 CTGAGAGCGCGAAAT GCGGCGCGCTGGCT GAAC AGC-AGCACGCCGC CGGCGACGATGAACG nxiA 798451 - 797393 - | putative high-affinity nickel-transport protein TERM 595 797929 - 797948 + g 80 -15 -3.38951 | opp_overlap 797914 GCCGCGCCAGCCAGC CGCGCTGC TGCA GCAGCGCG TTGATGTCTTCGTCG TERM 596 798066 - 798053 - G 70 -5.9 -4.19624 | overlap 798055 798056 GATCGCGAACAGAAA CAGCG CCGA CGCCG AGGTGCCGATCACCC sugE 799107 - 798784 - | chaperone btaB 799841 - 799104 - | putative BtaB protein, S-adenosylmethionine:diacylgycerolhomoserine-N-methyltransf erase RPA0727 799994 - 801217 + | S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase RPA0728 801773 - 803179 + | hypothetical protein TERM 597 803468 - 803423 - g 80 -15.3 -3.31144 | overlap 803424 GGTTCAGGCGCAGAA TGTCAGCCTGACGCCGGCGGC GTCG GCCGCCGCCTTCAAGCAGACC GTCTGCACTAATGCC TERM 598 803467 - 803424 - g 87 -18.8 -2.58544 | overlap 803423 GTTCAGGCGCAGAAT GTCAGCCTGACGCCGGCGGC GTCG GCCGCCGCCTTCAAGCAGAC CGTCTGCACTAATGC RPA0729 803190 - 803768 + | hypothetical protein RPA0730 803781 - 804470 + | hypothetical protein TERM 599 804861 - 804894 + F 93 -14.6 -4.02817 | gap 1 CTCTCCCCAGACTGG CCCCGCGCTCCCGAT ACGCA ACCGGGAG-GCGGGG TTATTGTTGTCCGGC TERM 600 805746 - 805698 - g 70 -13.1 -3.06671 | gap 1 ACACCCACGTCAAGA CCGGGCG-CTGGGCGAGCGTGA TGCCGG CCAAGCTCGCCGAGACGCTCGG ACTCGGCGACGAAGT RPA0731 805004 - 805897 + | LysR family transcriptional regulator TERM 601 806051 - 806004 - f 76 -10.4 -3.90744 | gap 1, opp_overlap 806004 806039, overlap 806005 TCCGTCCGCAAACAA CCTCGGGATTCCGGGTTCGCCGC TGC GCGGCGC-CCCGGAATGACGGTG TCAATTCCCCTTGTC fdsG 806161 - 806631 + | formate dehydrogenase subunit gamma fdsB 806628 - 808184 + | NADH dehydrogenase (quinone) TERM 602 809489 - 809517 + G 90 -18.9 -3.05596 | GGGCGCCAAGCTGAT CGTGGTCGATCCG CGC CGGATCGACCTCG TTCGCTCGGCGCATG fdsA 808197 - 811043 + | formate dehydrogenase, alpha subunit fdsC 811043 - 811873 + | formate dehydrogenase accessory protein fdsD 811863 - 812078 + | NAD-dependent formate dehydrogenase delta subunit TERM 603 812170 - 812190 + G 84 -6.8 -4.72272 | overlap 812172 812173 ATGGGGCCGGACGGC TGTCCGGC GTACG GCCGGGTA TTTTTGATCGCGAAC TERM 604 812241 - 812256 + G 78 -10.4 -4.04474 | TTCAATCGTTGGCTG GTGCCG CCGG CGGCAC TTTGTATCCACCTCT RPA0737 812088 - 813791 + | MFS superfamily oxalate/formate antiporter TERM 605 813804 - 813836 + F 95 -17.8 -3.48593 | gap 1, overlap 813807 813824 TGATCTCGGCCGATG TTG-CGGGACGGCGG CGTG CCGCCGTCCCGTCGA TTCTCTGACGAGATG TERM 606 813807 - 813832 + F 100 -21.9 -2.63079 | overlap 813804 813824 TCTCGGCCGATGTTG CGGGACGGCGG CGTG CCGCCGTCCCG TCGATTCTCTGACGA TERM 607 813824 - 813853 + F 71 -9.3 -3.737 | gap 1, overlap 813807 813804 GGACGGCGGCGTGCC GCCGTCCCGTC-GA TTC TCTGACGAGATGGC TTTGCTACGCGCTTC TERM 608 814037 - 814021 - g 81 -10.8 -4.14945 | CTAATAAGAATCAAA GCGGCC GGATT GGCCGC CGAGGGAGTGAACGC RPA0738 813898 - 815307 + | L-sorbosone dehydrogenase cyc 815452 - 816042 + | putative cytochrome c RPA0740 816117 - 817226 + | Acyl-CoA dehydrogenase RPA0741 817223 - 818170 + | hypothetical protein RPA0742 818170 - 819561 + | hypothetical protein RPA0743 819739 - 821265 + | putative acid-CoA ligase TERM 609 821392 - 821346 - T 100 -21.6 -3.21099 | overlap 821349 GGCGTGCACCAGCAA TGACGCAAGCTCCGGCTCCGAC TGT ATCGGACCCGGAGCTTGCGACC GCTGCGCCGCTCGTC TERM 610 821389 - 821349 - T 100 -26.3 -2.80016 | overlap 821346 GTGCACCAGCAATGA CGCAAGCTCCGGCTCCGAC TGT ATCGGACCCGGAGCTTGCG ACCGCTGCGCCGCTC RPA0744 821724 - 821440 - | putative high potential iron sulfur protein (HiPIP) RPA0745 824297 - 821865 - | outer membrane protein precursor TERM 611 824075 - 824099 + g 85 -15.7 -3.6502 | CGCCGGTCGGATTGG TCGGCGACACC CAG GGCGTCGCCGA TTTCGGTGGGCGCTG RPA0746 826001 - 824397 - | deca-heme c-type cytochrome TERM 612 825945 - 825960 + g 70 -6 -4.25104 | opp_overlap 825929 825938, overlap 825946 CGACGAGATCCAGCT CCGGCG GCCG CGCCGA TTTTGGTCGCGCGCA cysA 827822 - 826776 - | sulphate transport system permease protein 1 TERM 613 827427 - 827478 + g 85 -7.8 -4.80882 | gap 1, opp_overlap 827443 CAGCTGGTTGGGGTA GC-GGTCGGCGAGCCAACCGAGCTG CAC CAGGTCGAGCAGATCGCCGACCCGC TTTTTGATCTCCGCT cysW 828726 - 827812 - | sulfate ABC transporter, permease component cysT 829567 - 828731 - | putative sulfate ABC transporter, permease component TERM 614 829693 - 829642 - R 71 -12.6 -3.09635 | gap 3, opp_overlap 829645 829650 829654, overlap 829646 829650 829654 ATTGCGAGGAGCGAA GCGA--CGAAGCAATCCAGTACCGC ATGCG GCGCT-CTGGATTGCTTCGCTTCGC TGGCAATGACGGGAG TERM 615 829645 - 829688 + r 71 -13.3 -3.06183 | gap 1, opp_overlap 829642 829646 829650 829654, overlap 829650 829654 GCGAGGAGCGAAGCG ACGAAGCAATCCAGTACCGC ATGCG GCGCT-CTGGATTGCTTCGC TTCGCTGGCAATGAC TERM 616 829687 - 829646 - R 80 -16.8 -2.55544 | gap 1, opp_overlap 829645 829650 829654, overlap 829642 829650 829654 CGAGGAGCGAAGCGA CGAAGCAATCCAGTACCGC ATGCG GCGCT-CTGGATTGCTTCG CTTCGCTGGCAATGA sbp 830849 - 829860 - | thiosulphate-binding protein cysH 831714 - 830974 - | phosphoadenosine phosphosulfate reductase TERM 617 831108 - 831098 - G 72 -4.6 -4.55287 | CCGACGGAGAGAAAA CCCG ACG CGAG TAACGGATGCTGCGG cysD 832014 - 832883 + | sulfate adenylyltransferase subunit 2 TERM 618 833878 - 833889 + G 72 -5.8 -4.431 | overlap 833870 GCGACACCCGCCGGC TCCG CGCG CGGA TTTTCTGGCTGCATG cysN 832905 - 834815 + | putative CysN/CysC bifunctional enzyme, ATP-sulfurylase large subunit and adenylyl sulfate kinase RPA0754 836258 - 834822 - | signal transduction histidine kinase RPA0755 837298 - 836321 - | putative oligopeptide ABC transporter, ATP-binding component RPA0756 838711 - 837299 - | putative amidase TERM 619 838224 - 838202 - G 70 -11.2 -3.54424 | GCCGAGCGCCGCAAA CGTCAGCCGC GCG GCGACTGCCG AGCCGGAACCGGACG TERM 620 838472 - 838498 + g 77 -13.6 -3.60475 | ATACATGTCCTTGTG GGCCAGCGGCAC GCC GTGCAGCGGGCC TTTGCGCTCGCCCTT RPA0757 838902 - 838708 - | hypothetical protein RPA0758 839974 - 838916 - | putative oligopeptide ABC transporter, ATP-binding component RPA0759 840884 - 839979 - | putative oligopeptide ABC transporter, permease component RPA0760 841842 - 840889 - | putative oligopeptide ABC transporter, permease component RPA0761 843701 - 842040 - | oligopeptide ABC transporter, periplasmic binding protein component TERM 621 843257 - 843305 + g 91 -11.8 -4.20367 | opp_overlap 843251, overlap 843261 843301 CCGAGACCAGCGTCG GCATCCGCGATGCGGTCAC-GCCG ATC TGGCTGGGATCGTATTGCGG-TGC TTCTTTGTTGAGCAC RPA0762 843889 - 845487 + | oligopeptide ABC transporter, periplasmic binding protein component TERM 622 845552 - 845503 - f 100 -10.2 -4.68103 | gap 2, opp_overlap 845516, overlap 845516 CCAAGCGCAACAAAA GCGATCACAAAACGGGCTGCGTAC GAAA GTGCACAGCCC-TTTTTTG-TCGC CCGCTGCACAAACTT TERM 623 845516 - 845541 + F 100 -11.1 -5.24129 | opp_overlap 845516 845503 AAGCGATCACAAAAC GGGCTGCGTAC GAAA GTGCACAGCCC TTTTTTGTCGCCCGC RPA0763 845640 - 846434 + | methyltransferase RPA0764 846924 - 846490 - | hypothetical protein RPA0765 849308 - 846945 - | putative outer membrane receptor for iron transport TERM 624 849563 - 849545 - H 73 -8.1 -4.00042 | gap 1, overlap 849542 CTTTCGAGCAAACAA CGC-CGGC CGCG GCCGTGCG GCCCCCTAGAAAAGC RPA0766 849702 - 850409 + | Crp/FNR family transcriptional regulator RPA0767 850515 - 851456 + | diguanylate cyclase TERM 625 851611 - 851573 - f 79 -14 -3.53091 | gap 2, overlap 851576 AGTTTGGTCCCGAAA GAACCGGGCGC--GGACC GCAAG AGTCCGAGCGCCCGGTTC CGGTGGTCACGCCGC TERM 626 851608 - 851576 - f 76 -9.9 -3.90744 | gap 2, overlap 851573 TTGGTCCCGAAAGAA CCGGGCGC--GGACC GCAAG AGTCCGAGCGCCCGG TTCCGGTGGTCACGC RPA0768 851947 - 852750 + | transposase TERM 627 853550 - 853560 + G 75 -6.8 -4.37527 | CCACAGAGCTCTTAT CGTC CTT GACG TTTTCATCATTCTGA RPA0769 853002 - 853823 + | hypothetical protein RPA0770 854762 - 853839 - | integrase catalytic subunit RPA0771 855022 - 854756 - | protein commonly found in insertion elements RPA0772 855099 - 856412 + | pentapeptide repeat-containing protein RPA0773 857179 - 856721 - | hypothetical protein TERM 628 857062 - 857089 + g 77 -4.1 -4.74132 | gap 1, overlap 857032 TCTGATAGATCGCGT GCCGCCTATCGA ACAAG TCGA-GCGCGGC TTTTTCCTGGGCTGT RPA0774 857784 - 858209 + | hypothetical protein RPA0775 858557 - 859069 + | hypothetical protein TERM 629 859121 - 859139 + T 70 -7.4 -4.03234 | overlap 859131 CTTTCTGCGACGGCG TCGCCC CACGGCT GGGCGA TTTCTGTCGCGCCGC RPA0776 860694 - 859102 - | gamma-glutamyltranspeptidase precursor TERM 630 860772 - 860716 - R 71 -10.7 -3.53012 | overlap 860724 860727 GCTTTCGCTGGCAAA GGGGACAACAC-GCGGCGGGGCCGGCG GACTA CGCCGGCGCCG-CGCAGTGTAGGGCCT GCTGCGAGCCGCTGC TERM 631 860764 - 860724 - R 93 -16.9 -3.39668 | overlap 860716 860727 TGGCAAAGGGGACAA CAC-GCGGCGGGGCCGGCG GACTA CGCCGGCGCCG-CGCAGTG TAGGGCCTGCTGCGA TERM 632 860760 - 860727 - R 83 -17.4 -2.55508 | gap 1, overlap 860724 860716 CAAAGGGGACAACAC GCGGCGGGGCCGGCG GACTA CGCCGGCGCCG-CGC AGTGTAGGGCCTGCT RPA0777 863527 - 860813 - | diguanylate cyclase/phosphodiesterase TERM 633 862023 - 861997 - G 75 -15.8 -2.73275 | opp_overlap 861990 861992 862000, overlap 861992 861994 TATCGATATACAGCA GCGCGAACGGCG CAC CGCGGCTCGCGC GTTGCAGTTCGTTTT TERM 634 863703 - 863728 + r 100 -21.9 -3.32844 | opp_overlap 863679 863703 TCCACACAAAGCAAA GGGCCGGCGGA TCGC TCCGCCGGCCC TTCTGAAATACGAGC TERM 635 863728 - 863703 - R 100 -21.9 -4.18042 | opp_overlap 863703, overlap 863679 TCCACACAAAGCAAA GGGCCGGCGGA TCGC TCCGCCGGCCC TTCTGAAATACGAGC RPA0778 864177 - 863776 - | hypothetical protein TERM 636 864503 - 864514 + H 81 -7.2 -4.40804 | overlap 864482 864501 GCGAAGCTCCCCTGC GGCG TATT CGCC TTTTGTCGGGTGCTG RPA0779 864609 - 864803 + | hypothetical protein RPA0780 866069 - 864804 - | acyl-CoA dehydrogenase RPA0781 866500 - 866150 - | putative cytochrome c552 precursor RPA0782 866937 - 866503 - | hypothetical protein RPA0783 868943 - 867126 - | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) TERM 637 869410 - 869382 - g 70 -10.9 -3.61398 | CTGCCTGTTCAACAA TGCCGGCGGTCCG GCG CAGACCGGGGGCA TCGAAGGCCTCGAGG RPA0784 869122 - 869964 + | short-chain dehydrogenase/reductase SDR TERM 638 869998 - 870052 + T 90 -18.2 -3.09635 | gap 3, opp_overlap 870003 870008 870012, overlap 870004 870008 870012 870018 AATCCGTCATTGCGA GCGAAGCGAAGCAATCCAG-AGCGCCG AGCA CGGGGCTTCTGGATTGCTTCG-T-CGC TTCGCTCCTCGCAAT TERM 639 870049 - 870003 - T 91 -18.9 -3.06183 | gap 1, opp_overlap 869998 870004 870008 870012 870018, overlap 870008 870012 GTCATTGCGAGCGAA GCGAAGCAATCCAG-AGCGCCG AGCA CGGGGCTTCTGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 640 870004 - 870048 + T 100 -22.4 -2.55544 | gap 1, opp_overlap 870003 870008 870012, overlap 869998 870008 870012 870018 TCATTGCGAGCGAAG CGAAGCAATCCAG-AGCGCCG AGCA CGGGGCTTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 641 870008 - 870044 + T 86 -16 -3.22388 | gap 1, opp_overlap 870003 870008 870012, overlap 870004 869998 870012 870018 TGCGAGCGAAGCGAA GCAATCCAG-AGCGCCG AGCA CGGGGCTTCTGGATTGC TTCGTCGCTTCGCTC TERM 642 870044 - 870008 - T 86 -16 -3.19192 | gap 1, opp_overlap 870008 870004 869998 870012 870018, overlap 870003 870012 TGCGAGCGAAGCGAA GCAATCCAG-AGCGCCG AGCA CGGGGCTTCTGGATTGC TTCGTCGCTTCGCTC RPA0785 871470 - 870091 - | cytochrome P450 RPA0786 872985 - 871591 - | putative adenylate/guanylate cyclase RPA0787 873042 - 874016 + | heat shock protein HtpX TERM 643 874044 - 874063 + F 100 -16.4 -5.65496 | GATGGATGCTTCGAA GGCCCCGG TTCG CCGGGGCC TTTTTGTTTTTGCTG TERM 644 875073 - 875125 + G 70 -4 -4.44667 | gap 1, overlap 875077 ATGCCGGTGGTCGAC CTGA-CGCTGCTCGGCGATCGCG CGTTCGTC CGCGGTCTCGGCGCAGTGTTCTG TTTCTTCTTCGCCAA TERM 645 875347 - 875375 + G 78 -14.5 -3.27774 | GCCTGATCGCTGCCA CGGCGACGGTGAT CGC GTCGCCGACGCCG TTCGTACTTGCGCTG RPA0788 874269 - 875684 + | major facilitator superfamily drug efflux transporter RPA0789 876868 - 875681 - | putative serine-glyoxylate aminotransferase RPA0790 877778 - 876924 - | hypothetical protein TERM 646 877358 - 877368 + g 72 -8.2 -4.07568 | overlap 877344 GCCGGTCGGCGCTGT GCCC GTC GGGC TTTTCGAACGCGAGA exoI1 878633 - 877812 - | nuclease RPA0792 880396 - 878657 - | hypothetical protein TERM 647 878740 - 878763 + g 75 -13.8 -3.29958 | opp_overlap 878721, overlap 878738 AGGTCACTTCCGGTC CGCCGACCAG AATG CGGGTCGGCG TCTTCATCTTGTTCC TERM 648 879407 - 879385 - G 73 -9.2 -3.98661 | overlap 879387 GATAGGCACGATAAA GATCGATCAG CGG CTGATCGATG ATCGGATCGGACGAG TERM 649 879405 - 879387 - G 72 -11.8 -3.5812 | overlap 879385 TAGGCACGATAAAGA TCGATCAG CGG CTGATCGA TGATCGGATCGGACG TERM 650 879538 - 879527 - G 72 -7.2 -4.16921 | overlap 879519 879518 GAAGAACCGCGAAAA CCGC GAAT GCGG CGGTGGGGCCAGTGC RPA0793 880850 - 881716 + | peptidase C14, caspase catalytic subunit p20 TERM 651 881783 - 881747 - T 100 -18.2 -4.07568 | gap 2, opp_overlap 881749 881750, overlap 881750 881753 GTCTTTTTCTGAAAA CGAGAAGGCCTGACGCGG TGT CCGCGTCAGGCCTT--CG TTTTTGACAGCGTGT TERM 652 881749 - 881783 + T 100 -24.4 -4.57837 | opp_overlap 881747 881750 881753, overlap 881750 CTTTTTCTGAAAACG AGAAGGCCTGACGCGG TGT CCGCGTCAGGCCTTCG TTTTTGACAGCGTGT TERM 653 881782 - 881750 - T 100 -27.9 -3.08032 | opp_overlap 881750 881749, overlap 881747 881753 TTTTTCTGAAAACGA GAAGGCCTGACGCGG TGT CCGCGTCAGGCCTTC GTTTTTGACAGCGTG TERM 654 881750 - 881782 + T 100 -27.9 -3.3422 | opp_overlap 881747 881750 881753, overlap 881749 TTTTTCTGAAAACGA GAAGGCCTGACGCGG TGT CCGCGTCAGGCCTTC GTTTTTGACAGCGTG TERM 655 881779 - 881753 - T 100 -23.8 -3.68359 | opp_overlap 881750 881749, overlap 881750 881747 TTCTGAAAACGAGAA GGCCTGACGCGG TGT CCGCGTCAGGCC TTCGTTTTTGACAGC acaP 882565 - 881807 - | carbonate dehydratase RPA0795 883284 - 882652 - | S24 family peptidase TERM 656 883407 - 883392 - g 72 -5.4 -4.36914 | overlap 883393 CGTCCGGCGACAAAA CCGCAA GCTC TTGCGA AGCTTCAGGACGGCC RPA0796 883368 - 883958 + | hypothetical protein TERM 657 884515 - 884481 - g 70 -12.9 -3.01712 | gap 2, opp_overlap 884471 TCTCGTCGCCGAACA CGCCG-GGCCTGC-GCA ATC TGCAGCAGGCGGCGGCG CTCGACGATCTGCTG TERM 658 885023 - 885000 - g 74 -12.4 -3.53091 | ATTCGCTCGCCGAAA TCGTCGGCGC CGAC GCGCCGATGA TCACCGCGGAAGAGT uraI 883955 - 885049 + | dihydroorotate dehydrogenase 2 TERM 659 885077 - 885121 + T 77 -14.4 -2.84098 | opp_overlap 885101 885105, overlap 885074 CTGTTACTCACACCC CTGTCATTCCGGG-GCGCTCGC AAA GCGAGCGAACCCGGAATC-CAG TAGTTACTTGGGCAC TERM 660 885172 - 885143 - T 77 -14.3 -2.85351 | gap 1, opp_overlap 885137 885136, overlap 885105 885101 CTTGGGCACATGAGA TTCCGGGTTCGCGC TGC GCGCGC-CCCGGAA TGACGCCTTATAGTT RPA0798 885924 - 885190 - | Beta-lactamase-like RPA0799 886733 - 886068 - | putative carbonic anhydrase matE1 888235 - 886913 - | MATE efflux family protein RPA0801 888589 - 888254 - | hypothetical protein TERM 661 888634 - 888658 + r 76 -9.1 -4.0162 | overlap 888635 888636 GCTTTGCCGTCAATG GCCGCGGGCGG AGG TCGCCGGCGGA TTTGTGGTCTCCGCC TERM 662 888635 - 888657 + r 71 -12.6 -3.00651 | overlap 888634 888636 CTTTGCCGTCAATGG CCGCGGGCGG AGG TCGCCGGCGG ATTTGTGGTCTCCGC RPA0802 890493 - 888628 - | ATP-dependent DNA ligase TERM 663 890311 - 890280 - G 72 -15.2 -2.79183 | gap 1, opp_overlap 890282, overlap 890289 CGTAGTCGTAGGACA GGCCGAACAGCACCG GGT CGGTGC-GTTCGGCG ATCAGGGCGCGGATC RPA0803 891536 - 890490 - | putative mRNA 3-end processing factor RPA0804 891595 - 892530 + | hypothetical protein TERM 664 892634 - 892655 + T 71 -12.9 -3.03006 | opp_overlap 892635, overlap 892623 CTGCCGCAAACAAAA ACCCCGGCC GCTA GGCCGGGGC TCTGTGTCCGTTGCT TERM 665 892654 - 892635 - T 100 -16.4 -5.27335 | opp_overlap 892634 892623 TGCCGCAAACAAAAA CCCCGGCC GCTA GGCCGGGG CTCTGTGTCCGTTGC RPA0805 894032 - 892683 - | outer membrane protein RPA0806 894376 - 895596 + | high-affinity branched-chain amino acid transport system substrate-binding protein TERM 666 895659 - 895691 + F 82 -11.2 -4.08216 | overlap 895660 ATCCCGACACGTGGT TGCGTATGGCCGGG CTCGT CCCGGCCATTCACG TTTTAGGGCGGCTCC TERM 667 895660 - 895690 + F 71 -12.5 -3.04715 | overlap 895659 TCCCGACACGTGGTT GCGTATGGCCGGG CTCGT CCCGGCCATTCAC GTTTTAGGGCGGCTC TERM 668 895849 - 895868 + G 75 -9.2 -4.07568 | GCGCGGCTGGGCGCC GCGCGATC ATCA GCTCGCGC TTTTGGAAAAGGCAC TERM 669 895914 - 895879 - g 75 -9.6 -4.07568 | gap 1, overlap 895883 CGCGCTTTTGGAAAA GGCACGGGC-GCAACGC TCT GCGCTGCTGATCGCGCC GACCGGCGCCGGCAA TERM 670 895922 - 895942 + G 82 -12.5 -3.89822 | ATCGCGCCGACCGGC GCCGGCAAG ACC CTGGCCGGC TTTCTGCCGTCGCTG TERM 671 896001 - 895978 - g 74 -12.4 -3.53091 | opp_overlap 895972 ACTGTGCTCCTCAAA CCTCTCCCCG CTCG CTGGGAGAGG TCGACTTGCTGGCGT TERM 672 896301 - 896274 - g 77 -13.4 -3.53444 | gap 1, overlap 896255 CGATCCGCGTCGAAA CCCG-CACCGGCG ATA CGCCGGTGTCGCG GCGGACACGGCAGCG TERM 673 896604 - 896582 - g 71 -14.9 -2.59431 | overlap 896578 GTGCCGCAGAACTCA CCCTCTCCC GCAAA GGGAGAGGG AGACGAGAGGGCCGT TERM 674 897199 - 897220 + G 78 -6.5 -4.58663 | gap 1, overlap 897210 GGCGCAGCACATTCT CGGCTGCGCC TGC GGCGAA-CCG TTTTTCGCCGATGAT TERM 675 897361 - 897339 - g 74 -7.6 -4.19817 | overlap 897343 GCTACGCACTGAAAA GCTACGAGCG CTT CGCCCGCATC AAGCAGGACAAGCAG RPA0807 895772 - 898489 + | ATP dependent DNA helicase RPA0808 898734 - 899276 + | hypothetical protein TERM 676 899305 - 899338 + T 88 -17.5 -2.98719 | gap 1, opp_overlap 899291 899323 899327 ACTACCCACGAGTCA TTCCGGG-GCGCTCGC AAA GCGAGCGAGCCCGGAA TCTCTGGTGTGCTAC TERM 677 899406 - 899356 - T 77 -14.1 -3.28712 | overlap 899327 899323 899401 TCTGGTGTGCTACAA TC-TCGGGATTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAATGACGACGA GAAGAATCCTCACGC RPA0809 900279 - 899416 - | LysR family transcriptional regulator RPA0810 900378 - 901298 + | DMT family permease RPA0811 901384 - 902730 + | putative manganese transp TERM 678 902742 - 902791 + T 82 -11.3 -4.07568 | gap 1 TTAACTCGCCCCACA CGCCGTCATTCCGGG-GCGCAGGC GAA GCCTGCGAACCCGGAATCTCGAAG TTTTCAGGCCGAGAG RPA0812 903697 - 902897 - | hypothetical protein RPA0813 904656 - 903694 - | hypothetical protein TERM 679 904828 - 904865 + r 81 -16.3 -2.82193 | gap 1, opp_overlap 904828 GCCGGGATTACAGAA TCGGTCGCAGTCGGGCTT TTT AGGCCCGGCAGCG-CCGA TCTCGTCCATCTGAT TERM 680 904865 - 904828 - R 75 -11.9 -3.54475 | gap 1, opp_overlap 904828 GCCGGGATTACAGAA TCGGTCGCAGTCGGGCTT TTT AGGCCCGGCAGCG-CCGA TCTCGTCCATCTGAT RPA0814 908287 - 904892 - | hypothetical protein TERM 681 907219 - 907229 + g 72 -8.2 -4.12188 | opp_overlap 907208 907207, overlap 907202 CAATGCCGCGCAGCG CGCC GAT GGCG TTTTCGAGCTGCTGC TERM 682 909332 - 909346 + G 85 -5.6 -4.99035 | ACATCCGCCCCGCCT TGCGTC TTC GTCGCA TTTTTATCTCGCTCA RPA0815 909116 - 909763 + | hypothetical protein RPA0816 909857 - 911647 + | putative acyl-CoA dehydrogenase RPA0817 911818 - 913026 + | acetyl-CoA acetyltransferase RPA0818 913151 - 915367 + | 3-hydroxyacyl-CoA dehydrogenase TERM 683 915991 - 916001 + G 100 -2.4 -5.75342 | TGCCGTTCGAGAAAA AGGC GCT GCCG TTTTTTTTGGAGCCG TERM 684 916172 - 916162 - g 72 -5.4 -4.34402 | GGTCGGACATGAAAA TCTC CAA GAGA CACTTCGAATTCTGA RPA0819 915791 - 917596 + | hypothetical protein gst2 918319 - 917708 - | putative glutathionine S-transferase RPA0821 918366 - 918932 + | MarR family transcriptional regulator TERM 685 919638 - 919613 - g 79 -6.8 -4.61231 | gap 1, opp_overlap 919622 919635 CGACATGGTCAAAAA GCTGC-GCGTC TCGGT GGCGCTGCAGC CGGTCGCGACCGCGC gshA 918960 - 920396 + | glutamate--cysteine ligase RPA0823 920542 - 921093 + | hypothetical protein TERM 686 921160 - 921148 - T 70 -10.5 -3.61715 | overlap 921135 CACCGCGGTGAAGAA CCGCG CGA CGCGG AAGCCTGAGAACCAA lepB1 921897 - 921127 - | signal peptidase I TERM 687 921622 - 921659 + g 70 -11.2 -3.53012 | gap 1, opp_overlap 921618 921613 921616 921615 921651 GCGAAACACCACCAC GTCGCCGCG-GTGCGGC GTAGA GCCGAACACGCGGCCGC TTTCCGGCACCGAGA RPA0825 923321 - 921894 - | peptidase U62, modulator of DNA gyrase RPA0826 923443 - 923664 + | hypothetical protein RPA0827 923664 - 923993 + | hypothetical protein RPA0828 924075 - 924545 + | MarR family transcriptional regulator ohr 924660 - 925085 + | organic hydroperoxide resistance protein TERM 688 925229 - 925268 + T 84 -15.8 -3.28712 | gap 1, overlap 925231 925232 GCGAGGCCGTGCGTG TGTCCGTCGATGGCCGGGT CGG GCCCGGCCAT-GACGGCTA TTGTGCGGAAACACA TERM 689 925231 - 925266 + T 86 -16.2 -3.21276 | gap 1, overlap 925229 925232 GAGGCCGTGCGTGTG TCCGTCGATGGCCGGGT CGG GCCCGGCCAT-GACGGC TATTGTGCGGAAACA TERM 690 925232 - 925265 + T 90 -19.7 -2.52623 | gap 1, overlap 925231 925229 AGGCCGTGCGTGTGT CCGTCGATGGCCGGGT CGG GCCCGGCCAT-GACGG CTATTGTGCGGAAAC RPA0830 926035 - 925367 - | hypothetical protein TERM 691 926304 - 926262 - H 74 -4.7 -4.65916 | opp_overlap 926269, overlap 926264 926285 CCGAGCGCAATAAAA CT-GCACGGCCGGTCACGCCG AAA CGGCGGGCTCG-CTGTGCTAG TCATAGGGAGCGCGG coxB 926324 - 927181 + | cytochrome-c oxidase coxA 927249 - 928874 + | cytochrome-c oxidase coxE 928920 - 929885 + | protoheme IX farnesyltransferase TERM 692 929990 - 929953 - g 75 -3.2 -4.84359 | opp_overlap 929953 929974, overlap 929954 CGATGCGCAGAAAAA GCGCCAGCGCGAACGC TCGATC GCCATCGCAGTCGCGC TCGGCGTGCTGGTGG CoxF 929885 - 930064 + | putative CoxF TERM 693 930276 - 930246 - g 82 -16.8 -3.07113 | CACCACCGGATTTAA CGGCACCACGCAGG TCG CCCGCGCTGTGCCG AGTTCGGCGCCGCTT coxG 930061 - 930705 + | cytochrome C oxidase assembly protein coxC 930777 - 931631 + | cytochrome c oxidase, subunit III TERM 694 931784 - 931732 - f 71 -12.8 -3.09635 | gap 1, opp_overlap 931744, overlap 931736 931740 931744 ATTGCGAGGAGCGAA GCGACGAAGCAATCCAAGAGCCCTG TGCA CAGCGCCCT-GGATTGCTTCGCCTT CGGCTCGCAATGACG TERM 695 931780 - 931736 - f 87 -18.8 -2.55544 | gap 1, opp_overlap 931744, overlap 931732 931740 931744 CGAGGAGCGAAGCGA CGAAGCAATCCAAGAGCCCTG TGCA CAGCGCCCT-GGATTGCTTCG CCTTCGGCTCGCAAT TERM 696 931776 - 931740 - f 70 -12.4 -3.22388 | gap 1, opp_overlap 931744, overlap 931736 931732 931744 GAGCGAAGCGACGAA GCAATCCAAGAGCCCTG TGCA CAGCGCCCT-GGATTGC TTCGCCTTCGGCTCG RPA0837 931794 - 932189 + | hypothetical protein RPA0838 932186 - 932989 + | surfeit 1 thrC 933124 - 934554 + | threonine synthase mpp 934551 - 935840 + | putative protease RPA0841 935893 - 936489 + | GCN5-related N-acetyltransferase RPA0842 936587 - 937240 + | hypothetical protein TERM 697 937323 - 937349 + T 100 -20.9 -4.13995 | opp_overlap 937323 TAAACAAAACAAAAA GGCCGGCGCGA TTGTT TCGCGCCGGCC TTTGATTTGTAACAG TERM 698 937349 - 937323 - T 100 -20.9 -5.67711 | opp_overlap 937323 TAAACAAAACAAAAA GGCCGGCGCGA TTGTT TCGCGCCGGCC TTTGATTTGTAACAG atpF1 937864 - 937373 - | H+-transporting two-sector ATPase, B/B' subunit atpF2 938427 - 937870 - | H+-transporting two-sector ATPase, B/B' subunit TERM 699 938444 - 938475 + r 71 -5.7 -4.28254 | overlap 938445 GGCTTCTCCTGTTCG GCCGGTCGCGACC CCGGAA GGTCAGGACCGGA TTTTGGATCTTAGAG atpE 938712 - 938485 - | F0F1 ATP synthase subunit C atpB 939507 - 938761 - | F0F1 ATP synthase subunit A atpI 939963 - 939577 - | FoF1 ATP synthase, subunit I RPA0848 940266 - 940889 + | DSBA oxidoreductase RPA0849 940935 - 941519 + | hypothetical protein RPA0850 941543 - 942016 + | hypothetical protein TERM 700 942058 - 942087 + T 70 -12.1 -3.22388 | opp_overlap 942061, overlap 942061 GCGAGCGACGCGAAT CAATCCAGCACGG TGCA CCGAGCTGGATGG TTCATCGCTTCGCTC TERM 701 942084 - 942061 - T 72 -12.4 -3.35992 | opp_overlap 942061 942058 AGCGACGCGAATCAA TCCAGCACGG TGCA CCGAGCTGGA TGGTTCATCGCTTCG TERM 702 942141 - 942175 + T 76 -10.7 -3.76224 | gap 1, opp_overlap 942145, overlap 942142 942145 942170 ATCAGTCTCTTAAAA CA-AAGCGGCCGCGGA TTGC TCCGCGGCCGCTGCTA TTTGGTCGGTCCGGC TERM 703 942142 - 942173 + T 85 -15.8 -3.46647 | opp_overlap 942145, overlap 942141 942145 942170 TCAGTCTCTTAAAAC AAAGCGGCCGCGGA TTGC TCCGCGGCCGCTGC TATTTGGTCGGTCCG TERM 704 942170 - 942145 - T 100 -21.9 -4.64861 | opp_overlap 942145 942142 942141 GTCTCTTAAAACAAA GCGGCCGCGGA TTGC TCCGCGGCCGC TGCTATTTGGTCGGT TERM 705 942145 - 942170 + T 100 -21.9 -2.87769 | opp_overlap 942145, overlap 942142 942141 GTCTCTTAAAACAAA GCGGCCGCGGA TTGC TCCGCGGCCGC TGCTATTTGGTCGGT RPA0851 943877 - 942213 - | general substrate transporter TERM 706 942528 - 942498 - G 70 -10.4 -3.75738 | overlap 942495 942501 CACCAGGACGAACAA CAGTCCGATCACCG CTG CGGTGCTCGAATTG AACACGTCGAACGGG TERM 707 944385 - 944416 + G 70 -2.2 -4.58663 | gap 1 GACGTCGACCTGGTG CTGCTCGACCTCAAG ATG CCTGGGATC-AGCGG TTTTTCCGGACTGAT RPA0852 944214 - 944891 + | two-component LuxR family transcriptional regulator TERM 708 944988 - 944944 - T 84 -13.7 -3.73775 | opp_overlap 944949, overlap 944945 944949 944959 GTCATTGCGAGCAAA GCGAAGCAATCCAAAGGCC ATGCGTG GGCCTCTGGATTGCTTTGT CGACTTCGTCTCCTC TERM 709 944987 - 944945 - T 87 -17.2 -2.84051 | opp_overlap 944949, overlap 944944 944949 944959 TCATTGCGAGCAAAG CGAAGCAATCCAAAGGCC ATGCGTG GGCCTCTGGATTGCTTTG TCGACTTCGTCTCCT TERM 710 944949 - 944983 + T 89 -14.4 -3.93236 | opp_overlap 944945 944944 944949 944959 TGCGAGCAAAGCGAA GCAATCCAAAGGCC ATGCGTG GGCCTCTGGATTGC TTTGTCGACTTCGTC TERM 711 944983 - 944949 - T 88 -16.6 -3.30701 | opp_overlap 944949, overlap 944945 944944 944959 TGCGAGCAAAGCGAA GCAATCCAAAGGCC ATGCGTG GGCCTCTGGATTGC TTTGTCGACTTCGTC RPA0853 948562 - 945053 - | periplasmic sensor hybrid histidine kinase TERM 712 947129 - 947169 + g 71 -12.6 -3.24924 | gap 2, opp_overlap 947155, overlap 947127 CCGCAGCGCCTCGAT GCCCCA-CGGGCCG-TGCTG CAA CAGCAGCAGCCCGGTGGTGC TGTTCTCCATGAAGC TERM 713 948711 - 948671 - R 100 -26.1 -3.70722 | opp_overlap 948663 TCTACCAACACAGAA GGGGCGCCTGCGACAGGGA ATT TCCCAGCCGCGGGCGCCCC CGCCGAAATCGTTAC hemO 949978 - 948749 - | 5-aminolevulinate synthase RPA0855 951263 - 950199 - | Beta-lactamase-like TERM 714 950712 - 950760 + g 75 -4.4 -4.63527 | gap 2, overlap 950714 950739 950741 CTCGCCGACAGTGAT GTCCTTGCCCTTGGCGAGACGGCG ATA CGCTG-C-CGGCAGCGGCACGGTC TTTTTCAGATAGTCC TERM 715 951240 - 951252 + g 77 -3.3 -4.91712 | overlap 951231 951226 GTCGTGCGACGTCTC GGTCG CGT CGGTC TTTTTATGCATTCGG TERM 716 951335 - 951323 - R 74 -4.7 -4.62069 | GCGCCAGCCGAAAAA CCGTC AGG GGCGG CTGCAGTCCTCACAG TERM 717 951381 - 951406 + r 100 -16.1 -3.98683 | opp_overlap 951381 ATCTGGACGCAAAAA GGGCCGATGGC GCGC GCCACCGGCCC TTTCCTTCATATCGT TERM 718 951406 - 951381 - R 100 -18.3 -4.66163 | opp_overlap 951381 ATCTGGACGCAAAAA GGGCCGATGGC GCGC GCCACCGGCCC TTTCCTTCATATCGT RPA0856 953567 - 951429 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 719 951516 - 951570 + g 78 -15.7 -3.15579 | GCCGGAGGCGTTCAG CACC-TCGGCGGCAGCGGAGCCGGCCT GTG AGGC-GGCGGCGCTGACGCCGACGATG TTACTGGAGACTTCG TERM 720 953750 - 953730 - R 100 -15.4 -5.0925 | TTCGAAAATGAAAAA GGGCCGGC GCGAG GCCGGCCC TTCCAACTCCCCGGA RPA0857 954516 - 953782 - | outer membrane protein RPA0858 955056 - 955805 + | ABC transporter ATP-binding protein RPA0859 955810 - 956682 + | hypothetical protein TERM 721 956927 - 956895 - g 70 -6.1 -4.18488 | ACCGACGCCAAGAAA GTCGCCGACGCCAAG CTG CTGGTCGTCAACGGC CTCGGCCTCGAAGGC RPA0860 956688 - 957605 + | ABC transporter, periplasmic binding protein RPA0861 957713 - 958801 + | cobalamin synthesis protein, P47K RPA0862 958798 - 959817 + | WD-40 repeat-containing G-protein RPA0863 959852 - 960574 + | Mg2+ transporter RPA0864 960635 - 961033 + | hypothetical protein TERM 722 961069 - 961092 + T 100 -13.8 -4.77438 | TCGACGATCACCTCA CCGGGCTCGC ATTT GCGGGCTCGG TTTTTGGTGATCAGT RPA0865 962770 - 961340 - | homospermidine synthase TERM 723 961681 - 961709 + g 77 -13.9 -3.4072 | overlap 961655 CGTAGACCAGTACGC CGAGTTCGTCGAT GCC GTCGACGATCTCG TTCTCGTCGAGGATG TERM 724 962610 - 962651 + g 71 -9.5 -3.85864 | gap 1 ACGCCGTGCTTCTTG GCGAGTTCGCCATCCTCG TGCGGAT CGATGATGACGAAC-CGC TTCTTGTCGTACTCG rnk 963284 - 962880 - | putative nucleoside diphosphate kinase regulator RPA0867 963965 - 963579 - | endoribonuclease L-PSP RPA0868 964221 - 964063 - | hypothetical protein RPA0869 964819 - 964232 - | GCN5-related N-acetyltransferase TERM 725 964372 - 964392 + g 88 -10.4 -4.4009 | gap 1 CGCGTTCGAACGGGC CGGGCAGCG CCAG CGC-GCCCG TTTTGTCGGCTGAGA TERM 726 964581 - 964533 - G 100 -20.5 -3.21099 | gap 3 TCGCGGCAGGACGAA TCGACGGCGAGGGGGCCGAGCACG AGTG CG-GCCCGGCCCCCT-GC-GTCGA CATGCCAGAGCCGCA TERM 727 964891 - 964916 + r 81 -10.3 -4.19678 | CTTCACATGTGACAG GGAGAGGCCGG CAAG CCGGCCTCGAC TTTATTGACGTCTCC RPA0870 966104 - 964962 - | ornithine decarboxylase TERM 728 966176 - 966143 - R 70 -11.7 -3.14211 | gap 1 ACGGGCGCTTACCAA CGATGGCGCTG-ATCC GAC GGCTTCAGCGCCGTCG CGCGATGGAGGCGCG RPA0871 967029 - 966769 - | hypothetical protein TERM 729 968450 - 968422 - g 72 -13.1 -3.20723 | CTTCGAGGAACGCAA GGACGTCCCGGTG TGG CATCCGGACGTCC GGGTGTGGGAAGTGA RPA0872 967238 - 969328 + | peptidyl-dipeptidase Dcp RPA0873 969333 - 969986 + | hypothetical protein RPA0874 969983 - 971296 + | high-affinity nickel-transporter TERM 730 971312 - 971328 + F 70 -7.9 -4.07568 | opp_overlap 971300 971312 971313, overlap 971306 971313 971318 971320 CCAGCAGCCTGCAAA TCTGCGC TTT GCGCGGG TTTTGGCAAAACCCC TERM 731 972297 - 972283 - g 74 -5.6 -4.45083 | overlap 972287 CTTACACCGACAAAA CCATCG AGG CGCTGG CCCGCAAGGGCGTGC TERM 732 972414 - 972386 - g 70 -5.9 -4.2558 | overlap 972407 GATCGCGCAGGAAAA CGCCGAGATCTTC ATG GAACATGGCGGCG AGGAATTCACCGCGA hemH 971472 - 972509 + | ferrochelatase RPA0876 972666 - 973661 + | band 7 protein RPA0877 973678 - 974127 + | hypothetical protein RPA0878 975136 - 974231 - | AraC family transcriptional regulator TERM 733 974453 - 974485 + g 70 -10.6 -3.53012 | ATAGTCGCCCCCGGC GATCTCGATGCGCT CGACC GGCGGATCGAGGTC TTTGCCGCCCGGCGC TERM 734 975358 - 975388 + r 73 -3.2 -4.67982 | gap 1, opp_overlap 975353, overlap 975361 975362 975377 GGGTATCGAACCCAG GCATGG-CGCGGG GAAGAG CCTGCGACCGTCC TTTTGTTCGGTCGAG kpsF 976455 - 975442 - | CBS/sugar isomerase domain containing protein TERM 735 977070 - 977028 - g 73 -13.4 -3.35046 | gap 1, overlap 977026 977031 CCAGCGGCCGAAATA CTATCCGGGCGCG-CCGCG GCCGAA CGCGATCGGGCCCGGATCG CCGATGGTCACCCCG TERM 736 977067 - 977031 - g 71 -13.7 -2.84325 | gap 1, overlap 977028 977026 GCGGCCGAAATACTA TCCGGGCGCG-CCGCG GCCGAA CGCGATCGGGCCCGGA TCGCCGATGGTCACC TERM 737 978128 - 978155 + G 70 -13.4 -3.05463 | TCACCCGCACCTATA CGGCCGAGGTCG ACCA CGACTTCCGCCG TTGGCTGACGGCGAT RPA0880 976660 - 978375 + | hypothetical protein RPA0881 978487 - 979503 + | hypothetical protein RPA0882 980344 - 979493 - | ABC transporter, permease RPA0883 981248 - 980454 - | ABC transporter, ATP-binding protein TERM 738 980825 - 980793 - G 72 -13.3 -3.14931 | CGGATTGTTGATGAA GGTCTGCGCCAGCGC CAC GCGCTTGCGCATGCC GCCGGACAGCTGATG TERM 739 980915 - 980944 + g 71 -12.8 -3.23274 | opp_overlap 980934 CTTCGGCGTCCGCCT TGGCTGCGCCGC GAAACA GCGGCCCGGCCA TTACATTGTGCAGCA TERM 740 981045 - 980994 - G 74 -12.2 -3.53012 | gap 1, overlap 980976 981000 981001 CGCGTCCTGCTGAAA CACGAAG-CCGACGCGGCGATCGAC GCC GTCGACCGGCGCGTCGAACAAGGTG ACCTTGCCCGCCTGC TERM 741 981038 - 981000 - G 87 -17.4 -3.45571 | overlap 980976 980994 981001 CTGCTGAAACACGAA GCCGACGCGGCGATCGAC GCC GTCGACCGGCGCGTCGAA CAAGGTGACCTTGCC TERM 742 981037 - 981001 - G 100 -20.9 -2.67021 | overlap 980976 981000 980994 TGCTGAAACACGAAG CCGACGCGGCGATCGAC GCC GTCGACCGGCGCGTCGA ACAAGGTGACCTTGC RPA0884 982448 - 981450 - | ABC transporter, substrate-binding protein RPA0885 982848 - 982576 - | hypothetical protein TERM 743 983446 - 983435 - g 81 -3.6 -4.99043 | CCCGCAGAAAGAAAA CCGC GCGA GCGA GCCGTTCTTCACGGT RPA0886 983016 - 984524 + | putative diguanylate cyclase (GGDEF) TERM 744 984499 - 984534 + T 79 -16.2 -2.53263 | gap 1, opp_overlap 984468 GCGTCGTCGCCGTGC GCGGC-GAGGTCACGCT GGT GGCGTAACCTCTGCCGC TGCGTTCCGGCTGAG exoN 985430 - 984555 - | UTP-glucose-1-phosphate uridylyltransferase RPA0888 986600 - 985554 - | alpha/beta hydrolase fold hspD 986719 - 987195 + | heat shock protein Hsp20 TERM 745 987204 - 987183 - T 79 -13.7 -3.43961 | gap 1 CGACAACACCGAGAA GGCGGCCGCG TAA CGC-GCCGCC CGCTAGCGAACTTTC TERM 746 987275 - 987245 - T 78 -14.7 -3.06501 | gap 1, opp_overlap 987249, overlap 987248 TATACCCCTAGCCAA GC-AGGCGCCCCGG GCAA CCGGGGCGCTTTGC TGTTGGGAAGATCAT TERM 747 987271 - 987248 - T 78 -15.2 -2.75183 | opp_overlap 987249, overlap 987245 ACCCCTAGCCAAGCA GGCGCCCCGG GCAA CCGGGGCGCT TTGCTGTTGGGAAGA TERM 748 987249 - 987270 + T 100 -18.7 -3.92324 | opp_overlap 987248 987245 CCCCTAGCCAAGCAG GCGCCCCGG GCAA CCGGGGCGC TTTGCTGTTGGGAAG RPA0890 988113 - 987337 - | hypothetical protein TERM 749 989998 - 989942 - g 70 -6.5 -4.24342 | gap 2, overlap 989946 TTCCGGACGAAGAAA TCAAGGCGCAGCTCGCCGCCAGCCAGC CCTAT GCCGACTGGCTGC-ATC-GCACCCAGA TCGTGCTGGAAGAGC TERM 750 990045 - 990018 - g 74 -9.8 -3.76373 | gap 1 GCTGGAAGAGCTAAA GGACGCGCCGGTC AAG GGCCAGCGC-TCC AACCTGCCGCTGCTC TERM 751 990671 - 990713 + G 95 -18.4 -3.53012 | GTCTGGTGATCGAGT CCGGCGAGCCGCGCGAAGTG CAT CACTTCGCCTGCCTGGCCGG TTTCGGCGCCGAAGC TERM 752 992494 - 992475 - g 71 -9.2 -3.78034 | GATCGAGATCAACAA CACCGACC GCTC GGCCGGCG CGATGCTGTCCGGCA gltB 988573 - 993300 + | glutamate synthase ferredoxin subunit TERM 753 993371 - 993316 - f 91 -12 -4.36914 | GCCCTCGTCACAAAA CGGTCCGC-CACCCTGAGACGCCGG-TG TTAC CAGCCGGCCTCGCAGGGTGAGC-G-CCG CGGGGACAGCAACAG gltD 993473 - 994927 + | glutamate synthase subunit beta TERM 754 995003 - 995034 + F 74 -14.4 -2.52464 | opp_overlap 994973 CGGGCTCGACCCGCG CATCGATCGCGCGC ATTA GCGCGCGATCGACA TCACTTAAGCGAAGA TERM 755 995457 - 995432 - g 77 -13.3 -3.53012 | CTGCCTGTCGGCAAA GCTCGTCATCG ACGC CGATGGCGAGC AGCAGGCCATGCCGG RPA0893 995274 - 995675 + | hypothetical protein RPA0894 996728 - 995769 - | putative transposase RPA0895 997803 - 997027 - | putative 3-oxoacyl-[ACP] reductase TERM 756 997841 - 997857 + H 77 -15.1 -2.57013 | overlap 997838 TGTTGCGGAATGTGC GGGCGCG CGC CGCGCCC TGCCTTCCATTGACA RPA0896 997944 - 998678 + | putative 3-oxoacyl-acyl carrier protein reductase RPA0897 1000444 - 998750 - | hypothetical protein TERM 757 998791 - 998803 + g 70 -10.5 -3.71848 | opp_overlap 998771 AGGCACTCGGTGGCG GGCCG CGG CGGCC TTGTTGCTGCGGCGG TERM 758 999213 - 999253 + g 76 -15.4 -2.88822 | gap 2, overlap 999211 GCAGCGGGACGCGGC GCCG-GTCCGGC-CGGCGGC TTG GCGGCCGTGTCGGGCGCGGC TGGTTCTGTCGGCAG dapA 1001508 - 1000591 - | dihydrodipicolinate synthase TERM 759 1001576 - 1001557 - R 100 -10.6 -5.45652 | overlap 1001568 AGCTGCAACAAAAAA CCCCGTCG AAAC CGGCGGGG TCGGGTGCATGCGTG RPA0899 1003440 - 1002043 - | lytic murein transglycosylase RPA0900 1003627 - 1004259 + | Rht family amino acid efflux protein RPA0901 1005043 - 1004276 - | hypothetical protein RPA0902 1005507 - 1005076 - | glyoxalase/bleomycin resistance protein/dioxygenase RPA0903 1005555 - 1006154 + | TetR family transcriptional regulator RPA0904 1007090 - 1006170 - | histidinol-phosphate phosphatase, putative, inositol monophosphatase TERM 760 1007378 - 1007403 + r 100 -20.5 -5.79595 | TTCCTCCCTAGACTT GGGCCGCTTGC CATC GCAAGCGGCCC TTTTTTCTTTTCGGA RPA0905 1007827 - 1007654 - | Flp/Fap pilin component RPA0906 1008865 - 1007978 - | N-formylglutamate amidohydrolase RPA0907 1009176 - 1009535 + | response regulator receiver (CheY-like protein) RPA0908 1009925 - 1010050 + | hypothetical protein TERM 761 1010462 - 1010490 + T 77 -13.1 -3.60098 | opp_overlap 1010451 1010450 AAATTGACCGGAGGG CGGCGGGGCGT GGTCTAG GTGCCCCGCCG TTTCCAATCAGCCGT wrbA 1011097 - 1010498 - | TrpR binding protein WrbA RPA0910 1011958 - 1011260 - | hypothetical protein RPA0911 1012091 - 1013014 + | LysR family transcriptional regulator RPA0912 1013862 - 1013029 - | hypothetical protein TERM 762 1013694 - 1013666 - G 70 -11 -3.61398 | GGCGTGCGCCAATAA GTCTTCCAGCCG GCCTG CAGCTGGAAGGC AATGCCACCCAGCAG RPA0913 1013997 - 1014650 + | hypothetical protein RPA0914 1017750 - 1014871 - | diguanylate cyclase/phosphodiesterase RPA0915 1018871 - 1017873 - | putative NADPH quinone oxidoreductase TERM 763 1018299 - 1018322 + g 73 -9.6 -3.96148 | gap 1 GATGGCGCGGCTGGC GCCGA-GCTTG AGG CAGGCGTCGGC TTTGTCCTGCGAGCC RPA0916 1018985 - 1019176 + | hypothetical protein TERM 764 1019323 - 1019345 + F 73 -8.4 -4.09864 | overlap 1019325 ATGTCCATCTTTGGA CCGAGTGGAT CCT GTCCACTCTG TTTTGACGCCTCCCT TERM 765 1019374 - 1019395 + F 100 -11.5 -5.05782 | opp_overlap 1019376, overlap 1019376 CTGTTATCAACTTAA AAGCCGCCG GAAA CGGCGGCTC TTTTTTGGCCTCGGT TERM 766 1019376 - 1019393 + F 93 -14.1 -4.15748 | opp_overlap 1019376, overlap 1019374 GTTATCAACTTAAAA GCCGCCG GAAA CGGCGGC TCTTTTTTGGCCTCG TERM 767 1019393 - 1019376 - f 100 -14.1 -4.30014 | opp_overlap 1019376 1019374 GTTATCAACTTAAAA GCCGCCG GAAA CGGCGGC TCTTTTTTGGCCTCG RPA0917 1019597 - 1020106 + | AraC family transcriptional regulator TERM 768 1020150 - 1020182 + T 95 -11.2 -4.56597 | opp_overlap 1020149 1020150 GGACCACTATTAAAG TGGCTGTGGCCGGG CTCGC CCCGGCCATTGGCA TTTTTGGGGGACCGG TERM 769 1020243 - 1020276 + T 86 -16.7 -3.12327 | opp_overlap 1020250, overlap 1020250 GATTTGATCTGCCAA CGCAAAACGCCCCGC GCGA GCGGGGCGTTTGTCG TATTGGGTCTCGAAA TERM 770 1020250 - 1020269 + T 100 -16.4 -4.06786 | opp_overlap 1020250, overlap 1020243 TCTGCCAACGCAAAA CGCCCCGC GCGA GCGGGGCG TTTGTCGTATTGGGT TERM 771 1020269 - 1020250 - T 100 -16.4 -4.27316 | opp_overlap 1020250 1020243 TCTGCCAACGCAAAA CGCCCCGC GCGA GCGGGGCG TTTGTCGTATTGGGT TERM 772 1020327 - 1020316 - T 70 -7.2 -4.08945 | AGCAGCCGGCGAAAA GCCG GCGC CGGC TCAATCCTTCTTGAG rpmE 1020555 - 1020328 - | 50S ribosomal protein L31 RPA0919 1020753 - 1022657 + | ABC transporter permease/ATP-binding protein RPA0920 1023247 - 1022801 - | GCN5-related N-acetyltransferase RPA0921 1024419 - 1023394 - | hypothetical protein TERM 773 1024430 - 1024458 + r 74 -12.3 -3.53012 | overlap 1024407 GCCATCAGCTCTTCT CCGGCTCGCGCAG GCT CTTCTCGGGCCGG TTTACCAGGGCGGAC RPA0922 1025438 - 1024419 - | hypothetical protein RPA0923 1025618 - 1026445 + | hypothetical protein RPA0924 1026442 - 1027467 + | cyclopropane-fatty-acyl-phospholipid synthase RPA0925 1027750 - 1027944 + | hypothetical protein RPA0926 1028028 - 1028222 + | hypothetical protein TERM 774 1028274 - 1028304 + T 100 -19 -4.91084 | opp_overlap 1028269 1028268 ACTTGAAAATTCGAA GGCCGGCACCTGCG CCC TGCAGCTGCCGGCC TTTTCTTGTTCGCTG RPA0927 1028529 - 1028320 - | XRE family transcriptional regulator RPA0928 1029108 - 1028533 - | hypothetical protein TERM 775 1029157 - 1029141 - H 71 -8.1 -3.83502 | opp_overlap 1029141, overlap 1029152 1029153 TATTTCGAGATTAAA TTATCGT AAA ACGATAA TTTATCATCGTCAAG TERM 776 1029141 - 1029157 + H 73 -8.1 -3.99324 | opp_overlap 1029141 1029152 1029153 TATTTCGAGATTAAA TTATCGT AAA ACGATAA TTTATCATCGTCAAG RPA0929 1029178 - 1029765 + | hypothetical protein RPA0930 1030594 - 1029992 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubiD 1032129 - 1030591 - | carboxylyase-like protein RPA0932 1032245 - 1032790 + | hypothetical protein TERM 777 1032944 - 1032888 - g 83 -14.3 -3.84246 | overlap 1032889 1032933 GTTTCAACGACGAAA CCAACGCGCGCAACTTCCCGGGGCTGA ACT TCAGCCGCGAGGAGATGCGTGAGTCGA TCGCGCACGCGCATC TERM 778 1032943 - 1032889 - g 76 -15.6 -2.90227 | overlap 1032888 1032933 TTTCAACGACGAAAC CAACGCGCGCAACTTCCCGGGGCTGA ACT TCAGCCGCGAGGAGATGCGTGAGTCG ATCGCGCACGCGCAT RPA0933 1032794 - 1033771 + | peptidase U32 TERM 779 1033802 - 1033761 - f 71 -11.5 -3.4811 | gap 1, opp_overlap 1033771 1033772 1033775, overlap 1033759 GCGCCTACAAGAAGA CTTGGCGCTGACAG-CGTGG CGC CGACGCCCGTCGGCGCCGAG TGATTTTTCGCGAAC TERM 780 1033771 - 1033805 + F 86 -8.5 -4.56597 | gap 1, opp_overlap 1033761 1033759, overlap 1033772 1033775 GAAGACTTGGCGCTG ACAGCGTGGCGCCGAC GCCC GTCGGCGCCGAG-TGA TTTTTCGCGAACCAC TERM 781 1033772 - 1033804 + F 72 -12 -3.33744 | gap 1, opp_overlap 1033761 1033759, overlap 1033771 1033775 AAGACTTGGCGCTGA CAGCGTGGCGCCGAC GCCC GTCGGCGCCGAG-TG ATTTTTCGCGAACCA TERM 782 1033775 - 1033802 + F 80 -14.8 -3.23708 | opp_overlap 1033761 1033759, overlap 1033772 1033771 ACTTGGCGCTGACAG CGTGGCGCCGAC GCCC GTCGGCGCCGAG TGATTTTTCGCGAAC RPA0934 1033840 - 1034760 + | peptidase U32 TERM 783 1034750 - 1034769 + T 76 -10.6 -3.92542 | overlap 1034751 TGCGGCGGATCGTGC CCGCCGCG TAAG CGCGGCGA TTATTTGAAGCTCGG TERM 784 1034751 - 1034768 + T 74 -14.1 -2.95204 | overlap 1034750 GCGGCGGATCGTGCC CGCCGCG TAAG CGCGGCG ATTATTTGAAGCTCG TERM 785 1034834 - 1034804 - T 72 -7.5 -4.14627 | gap 1 TCTCTACACAAACAA CCGTCACCCTCCGC GCAA GCGGAGGGCC-CAG TGCGGCCGTGTGCTG RPA0935 1036549 - 1035248 - | hypothetical protein TERM 786 1036703 - 1036686 - g 75 -2.7 -4.82901 | gap 1 CGGCGCGGACAAAAA CTGCTACG TTT CA-AGCAG TTGCGGAGCTCGTCG TERM 787 1037087 - 1037104 + G 77 -9.9 -3.96148 | GAACGCGCGCTCGCC GTCGATG ACGT CATCGAC TTTCTGCTCGCCCCG RPA0936 1036631 - 1037203 + | TetR family transcriptional regulator RPA0937 1038020 - 1037232 - | extragenic suppressor protein SuhB RPA0938 1039216 - 1038125 - | hypothetical protein TERM 788 1039056 - 1039088 + g 72 -8.9 -4.11216 | GCCTCGGTGGCGGGT GCCTTGGCCGGGGCC GGC GGCCTGGGCTTCGGC TTTTCCGGCTCCAGC RPA0939 1039892 - 1039233 - | thiamine monophosphate synthase RPA0940 1040932 - 1039898 - | fructose-bisphosphate aldolase TERM 789 1040168 - 1040150 - G 71 -12.4 -3.25823 | GCCGCCGGACAGGAA GGCGATGC CCG GCACCGCC GACGGCACGCAGGCC RPA0941 1041310 - 1040987 - | hypothetical protein TERM 790 1041304 - 1041281 - G 73 -5.9 -4.37886 | opp_overlap 1041281 1041282, overlap 1041282 GTAGTCTCCAGAAAA CGCGACGGT GACAAG ATCGCCGCG CTTCATGCTTTCCAA RPA0942 1041591 - 1041307 - | hypothetical protein pgk 1042886 - 1041690 - | phosphoglycerate kinase TERM 791 1042330 - 1042344 + g 72 -11.4 -3.61398 | ATCACCGGCTTCACC GGCGCT TCC AGCGCC TTGTTCAGCGCGACG TERM 792 1042584 - 1042626 + g 75 -11.9 -3.7282 | gap 1, overlap 1042614 CGCGGCGATCGCCTT GGCGG-CGGGCTCGCCGATG CAGT CGTCGGCGAAGCCGACCGGC TTCTTGATGACGTCG cbbG 1044115 - 1043108 - | glyceraldehyde-3-phosphate dehydrogenase, type I cbbT2 1046316 - 1044331 - | transketolase TERM 793 1046236 - 1046247 + g 70 -3.6 -4.57073 | overlap 1046228 1046227 CGGCAGCCCGGGATG GCCG GATT TGGC TTTTTCCACCGCATC RPA0946 1046611 - 1046988 + | hypothetical protein RPA0947 1046985 - 1047395 + | hypothetical protein RPA0948 1049140 - 1047902 - | putative RNA methyltransferase matE2 1050611 - 1049187 - | MATE efflux family protein tly 1051414 - 1050674 - | hemolysin A TERM 794 1050827 - 1050857 + g 73 -14 -3.18264 | GGCGTCGCGGACGAT GCCGCGCTTCGAGG GCG CTTCGAACTGCGGC TTGATCAGTGCCAGC RPA0951 1051980 - 1051417 - | nucleoside 2-deoxyribosyltransferase TERM 795 1052022 - 1052002 - R 71 -14 -2.64155 | overlap 1051999 1051998 GTGGGTGCAAATTCA CCCTCCCC TGGAG GGGGAGGG TCGCTCGCGGAGCGA dxs 1054128 - 1052203 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 796 1054276 - 1054239 - R 82 -10.7 -3.9712 | gap 1, opp_overlap 1054273 CTACGTCAGGAGAAA TCAACGATCG-AAGCGTA GTG TGCGCTCCCGATCGTCGA AGTGACCTCGATCAC xseB 1054793 - 1054542 - | exodeoxyribonuclease VII small subunit TERM 797 1054748 - 1054761 + g 75 -4.5 -4.62783 | GTTCCTCGAGGGCGC GCTCG AAGC TGAGC TTTTTCACATCGGTG RPA0954 1055806 - 1054877 - | histone deacetylase superfamily RPA0955 1057630 - 1055912 - | putative 5`-nucleotidase family protein TERM 798 1056508 - 1056535 + g 70 -8.2 -3.96148 | CGGTCACCGAGCCAG CCGGCCGTGCCG CGAT CGGGCCGGCCAG TTTGTCGTAGGCGGC RPA0956 1057814 - 1058290 + | hypothetical protein TERM 799 1058331 - 1058291 - T 71 -11.2 -3.53444 | gap 2, opp_overlap 1058291 1058287, overlap 1058287 1058294 CCGGGGAAGAAGTAA TCAGCTCGGCTGCGGCACCC GGC GGGTGCCGCA-CAG-GCTCA TGCCTTCTTCCGCTG TERM 800 1058328 - 1058294 - T 70 -12.9 -2.89971 | gap 2, opp_overlap 1058291 1058287, overlap 1058291 1058287 GGGAAGAAGTAATCA GCTCGGCTGCGGCACCC GGC GGGTGCCGCA-CAG-GC TCATGCCTTCTTCCG RPA0957 1059123 - 1058329 - | enoyl-CoA hydratase/isomerase TERM 801 1058765 - 1058748 - G 79 -7 -4.66163 | AGTCGCAGTGAAAAA GCATCG TGGTGC CGATGC CGATCGCGATGCCGT TERM 802 1059271 - 1059241 - R 100 -11.8 -4.55287 | opp_overlap 1059241 1059240, overlap 1059243 1059245 GCGATGCACACAAAA TAGAGGGTGGCTGC GAC GCAGCCACCCCGGA GTTCTTCGTAAGCCG TERM 803 1059268 - 1059243 - R 91 -15.5 -3.88698 | gap 1, opp_overlap 1059241 1059240, overlap 1059241 1059245 GATGCACACAAAATA GAGGGTGGCTGC GAC GCAGCCACCC-C GGAGTTCTTCGTAAG TERM 804 1059267 - 1059245 - R 95 -19.2 -3.52162 | opp_overlap 1059241 1059240, overlap 1059243 1059241 TGCACACAAAATAGA GGGTGGCTGC GAC GCAGCCACCC CGGAGTTCTTCGTAA RPA0958 1061078 - 1059297 - | putative acyl-CoA dehydrogenase TERM 805 1060218 - 1060230 + g 70 -2.6 -4.63932 | overlap 1060206 CATCGTGAACATGCA CTGC ATGCC GCGG TTTTCTTCGCCGATC hupU 1061498 - 1062499 + | uptake hydrogenase accessory protein hupU hupS 1064173 - 1065285 + | hydrogenase small chain hupL 1065304 - 1067097 + | hydrogenase large chain hupC 1067114 - 1067842 + | Ni/Fe-hydrogenase 1 B-type cytochrome subunit hupD 1067904 - 1068557 + | hydrogenase maturation protein hupD TERM 806 1068987 - 1069010 + G 73 -13.2 -3.3164 | gap 1, overlap 1069005 CCACGGCGCCGAGAT GCCAGC-GCTG GCG CAGCCGCTGGC TTATGGGGCTGGCTT hupE 1068571 - 1069164 + | putative membrane-bound hydrogenase component hupE hupF 1069185 - 1069487 + | hydrogenase expression/formation protein hupF TERM 807 1069922 - 1069966 + G 73 -15.1 -2.87564 | gap 3 TCGCAGCCGAAGTCG CCGCCGAGGCCGA-GCGCGGCC TGAT GGC-GCGCTTCGGCGTCG-CGG TGTGTCCGAGCCTGG hupG 1069708 - 1070109 + | putative hydrogenase expression/formation protein hupG hupH 1070106 - 1070972 + | hydrogenase expression/formation protein hupH hupI 1070969 - 1071181 + | putative rubredoxin hupI hupJ 1071171 - 1071695 + | putative hydrogenase expression/formation protein hupJ hupK 1071692 - 1072801 + | putative hydrogenase expression/formation protein hupK hypA 1072794 - 1073135 + | hydrogenase formation/expression protein hypA hypB 1073135 - 1074091 + | hydrogenase expression/formation protein hypB TERM 808 1075259 - 1075210 - g 75 -15.8 -2.78384 | gap 2, opp_overlap 1075192 1075226 TGCGCGCCGACGACA GCGT-CGC-GCGGGTGATCGACGG TGCA CCGTCATTCATCCGCCGCGCACGC GGGGTCACGCCGCGG TERM 809 1075589 - 1075629 + G 85 -17.6 -2.72344 | gap 1 CCATGTCGCCTCGAT CGCGGCCGAGCA-CGGCAT CGAC ACGCCGCTGCTCGGCCTCG TACTTGACGGTCACG TERM 810 1076014 - 1076071 + G 70 -10.8 -3.54424 | gap 4, opp_overlap 1076003, overlap 1076004 AAATCCCGCGCGTGC TGGGCG-GCGGC--TGGGAGATCG-GCG CCGGCA CGCTCGATCTCTCGTCGCTGCTCGCCCA TTTGGCGACGTCGCG hypF 1074096 - 1076369 + | hydrogenase maturation protein hypF hypC 1076369 - 1076602 + | putative hypC hypD 1076599 - 1077741 + | hydrogenase expression/formation protein hypD hypE 1077738 - 1078784 + | hydrogenase expression/formation protein hypE TERM 811 1079563 - 1079575 + G 86 -9.1 -4.62069 | ACCGGCGCCTATCAG GACCG CAT CGGTC TTTTTGAAGTGGCCG hoxA 1078825 - 1080273 + | two component sigma-54-dependent hydrogenase transcriptional regulator hoxA RPA0980 1080263 - 1081615 + | sensor histidine kinase RPA0981 1081721 - 1084108 + | sensor histidine kinase pcaR 1084923 - 1084132 - | transcriptional regulator PcaR TERM 812 1085691 - 1085709 + G 72 -11.6 -3.54543 | GTGGGCCTATCTCGG CGCGGGCG AAC CGCCGGCG TTTCCGGAGATCGAT RPA0983 1085284 - 1086642 + | phthalate dioxygenase glnA4 1086639 - 1088099 + | putative glutamine synthetase-like protein RPA0985 1088146 - 1089318 + | putative branched-chain amino acid transport system substrate-binding protein RPA0986 1089530 - 1090396 + | urea/short-chain amide transport system permease protein RPA0987 1090399 - 1091397 + | branched chain amino acid ABC transporter permease RPA0988 1091394 - 1092158 + | putative branched-chain amino acid ABC transporter, ATP-binding protein RPA0989 1092139 - 1092852 + | putative ATP-binding component of ABC transporter phyB5 1095403 - 1092866 - | bacteriophytochrome PhyB TERM 813 1094730 - 1094700 - G 86 -18.2 -3.00298 | TGCGCGAACGACAGA TCGAGCGCGGCGCC GGA GGCGTCGCGCTCGG GCACGATCCGGCTGC TERM 814 1096326 - 1096302 - g 71 -12.8 -3.31792 | CGATGATGCCGACAA GCTGCGGCAG CGGGC CTGCCGCTGC AACGAGGCGATCAAG RPA0991 1095619 - 1096404 + | Crp/FNR family transcriptional regulator RPA0992 1097157 - 1096426 - | Crp/FNR family transcriptional regulator RPA0993 1097324 - 1097899 + | alpha-ribazole-5`-phosphate phosphatase CobC RPA0994 1098342 - 1098677 + | hypothetical protein TERM 815 1098704 - 1098667 - T 75 -12 -3.55622 | opp_overlap 1098681, overlap 1098679 GCGAAGTGTCGGAAA GCGGCGACTGAA-CGCCG CTGC CGGCGCCTCCG-CGCCGC TGGCTCGAACCAGCA TERM 816 1098681 - 1098739 + T 71 -13.1 -3.01712 | gap 3, opp_overlap 1098667 1098679 1098717, overlap 1098717 AGCGGCGACTGAACG CCGC-TGCCGGCGCCTCCGCGCCGCTGG CTCGAA CCAGCA--GCGGTGGCGCCGGCGCGCCG TGTTACAGCGAGCGG RPA0995 1099887 - 1098742 - | acyl-CoA dehydrogenase RPA0996 1101284 - 1100262 - | Alpha/beta hydrolase fold TERM 817 1100595 - 1100606 + g 75 -7.2 -4.30719 | GTGCAGCGCAAGGTC CGGC GTCA GCCG TTTGTTGTGGGCGCG RPA0997 1101329 - 1101757 + | ArsR family transcriptional regulator RPA0998 1102151 - 1101771 - | rhodanese-like protein TERM 818 1102295 - 1102337 + H 75 -14 -3.01712 | CGGAGGCGGGCATTG TGCGGCGCTCGTGCGGCCGC CAA GCCGGCGCACCAGTGCAGCA TGTTAGAAGGAGAAC PA5115 1102360 - 1102974 + | hypothetical protein RPA1000 1103377 - 1102982 - | nitrogenase-associated protein RPA1001 1103981 - 1103391 - | hypothetical protein modD 1104195 - 1105070 + | pyrophosphorylase ModD RPA1003 1106835 - 1105201 - | putative acyl-CoA synthase TERM 819 1106086 - 1106070 - G 70 -11.5 -3.44051 | opp_overlap 1106069 1106067 GCCGCATCAGCACAA CGCAGCC GCC GGCCGCG ATCGTTGCATAGGAT RPA1004 1107079 - 1107285 + | hypothetical protein TERM 820 1107276 - 1107304 + F 89 -11 -4.32046 | gap 1, overlap 1107265 GGTGGCGCCGCCGCC CGCGCCGT-AAGC GCCT GCTGGACGGCGCG TTTGATTTTTCGAAG RPA1005 1107364 - 1108014 + | NUDIX hydrolase RPA1006 1108128 - 1108529 + | protocatechuate 4,5-dioxygenase subunit alpha mhpB 1108545 - 1109402 + | protocatechuate 4,5-dioxygenase subunit beta RPA1008 1110359 - 1109469 - | AraC family transcriptional regulator RPA1009 1110510 - 1111697 + | cytochrome P450 TERM 821 1111720 - 1111750 + T 100 -17.6 -4.27316 | GGCAAGGTCCCATCG GAGCGGCCGTGGTC TCA GGTCACGGCTGCTC TTTTAGGTTCGACGA RPA1010 1113680 - 1111734 - | Beta-lactamase-like protein TERM 822 1112363 - 1112310 - G 73 -13.8 -3.14132 | gap 1 TGCCTGCGCCACGAA GCGGAACTCGCCGCGGGCGAAATCG GCGCG CGCCTTCGCCAGCAGCGC-CTCCGC GCCGCCCATGTAGTC TERM 823 1113060 - 1113084 + g 75 -14.3 -3.28712 | opp_overlap 1113046 1113065, overlap 1113063 ATACTGCGCGCGCCG CAACATCGCCG GCC CGGCGATGATG TTCTCGGAGACGGCG TERM 824 1113063 - 1113081 + g 71 -14.6 -2.52623 | opp_overlap 1113046 1113065, overlap 1113060 CTGCGCGCGCCGCAA CATCGCCG GCC CGGCGATG ATGTTCTCGGAGACG TERM 825 1113140 - 1113113 - G 73 -14.2 -3.13403 | gap 1, overlap 1113111 CGTGCTCCATGAACA GGTCGGGCG-CGA TGA TCGGCACCCGACC ACTCGCGAGCGTGGC TERM 826 1113249 - 1113212 - G 85 -9.8 -4.18018 | gap 1, overlap 1113215 GGGTGTGAGTGAAAA TCACCGCCACCACCGGC CTGTC GCCG-CGGTGGCGGGCA TAGAGCTGCATTGCC TERM 827 1113246 - 1113215 - G 78 -15.9 -3.11208 | gap 1, overlap 1113212 TGTGAGTGAAAATCA CCGCCACCACCGGC CTGTC GCCG-CGGTGGCGG GCATAGAGCTGCATT RPA1011 1113940 - 1114593 + | DSBA oxidoreductase TERM 828 1114809 - 1114841 + G 75 -9.7 -4.03234 | opp_overlap 1114797 1114796 AAGGCGGCTTTTCCG GCGTCGGCATTGCCG CGA CGCCGCTGCTGGCGC TTTATCTGCCGCCGC RPA1012 1114724 - 1115488 + | integral membrane protein TERM 829 1115469 - 1115509 + T 95 -18.4 -3.45366 | gap 1, overlap 1115470 AGGGACTGTCTCACC TGGTGCGCGGGGCGACG TAATCGAT CGTCGCCCCGC-CACCG TTGCTTAGTTCGAGG TERM 830 1115470 - 1115508 + T 90 -19.7 -2.66899 | gap 1, overlap 1115469 GGGACTGTCTCACCT GGTGCGCGGGGCGACG TAATCGAT CGTCGCCCCGC-CACC GTTGCTTAGTTCGAG fixG 1116956 - 1115514 - | nitrogen fixation protein FixG TERM 831 1116772 - 1116748 - G 76 -6.3 -4.48713 | overlap 1116750 1116753 TCGATGAAGAAGAAA TAGAACCGCCG CGC CGGCAGATCGA TCAGCACCGCCTGAT TERM 832 1116807 - 1116753 - G 81 -12 -4.02532 | gap 1, overlap 1116750 1116748 GAAGAAGAAATAGAA CCGCCGCGCCGG-CAGATCGATCAG CACCGC CTGATCGGGCAGGCCGGGGCCGCGG TTCCAACGTAGGAAC RPA1014 1117368 - 1117075 - | hypothetical protein RPA1015 1117580 - 1118170 + | PadR family transcriptional regulator petA 1118259 - 1118792 + | ubiquinol-cytochrome-c reductase, Rieske iron-sulfur protein RPA1017 1119042 - 1119434 + | nitrogen fixation-related protein TERM 833 1119490 - 1119525 + T 100 -19.8 -3.75169 | opp_overlap 1119490 1119494 GAGTGCAGCGACGAA GCAATCCAGGGCCCCG TGCT CGGCGCTCTGGATTGC TTTGCTACGCTCGTA TERM 834 1119525 - 1119490 - T 89 -17.6 -3.18582 | opp_overlap 1119490, overlap 1119494 GAGTGCAGCGACGAA GCAATCCAGGGCCCCG TGCT CGGCGCTCTGGATTGC TTTGCTACGCTCGTA TERM 835 1119521 - 1119494 - T 71 -11.2 -3.40867 | opp_overlap 1119490, overlap 1119490 GCAGCGACGAAGCAA TCCAGGGCCCCG TGCT CGGCGCTCTGGA TTGCTTTGCTACGCT TERM 836 1119628 - 1119646 + T 86 -8.1 -4.57073 | gap 1 TTATCAAAACGCATT GC-CGGCC GGAC GGCCGAGC TTTTTGAACACGATC RPA1018 1119816 - 1119616 - | hypothetical protein RPA1019 1119897 - 1120238 + | NolR/HlyU transcriptional regulator RPA1020 1120240 - 1121235 + | secretion protein HlyD RPA1021 1121232 - 1124456 + | AcrB/AcrD/AcrF family transporter RPA1022 1124518 - 1125171 + | outer membrane protein RPA1023 1125380 - 1125691 + | hypothetical protein TERM 837 1126629 - 1126639 + G 72 -8.2 -4.04997 | overlap 1126621 GTGGCAGGCGGGATC GGCG TCA CGCC TTTCGTTGCTTTGCT RPA1024 1125696 - 1126958 + | putative oxidoreductase RPA1025 1126955 - 1127320 + | cytochrome b5 TERM 838 1127409 - 1127375 - T 72 -4.2 -4.64598 | opp_overlap 1127374 1127375, overlap 1127377 1127378 CAATCACGGCAAAAA GAGCTTCGGTTCTGAT TGG ATCAGAACCGGAGAAA CCTATTTGCGTCAGG TERM 839 1127407 - 1127377 - T 79 -11.2 -3.93148 | opp_overlap 1127375 1127374, overlap 1127375 1127378 ATCACGGCAAAAAGA GCTTCGGTTCTGAT TGG ATCAGAACCGGAGA AACCTATTTGCGTCA TERM 840 1127406 - 1127378 - T 77 -14.7 -2.95166 | opp_overlap 1127375 1127374, overlap 1127377 1127375 TCACGGCAAAAAGAG CTTCGGTTCTGAT TGG ATCAGAACCGGAG AAACCTATTTGCGTC RPA1026 1128550 - 1127420 - | DNA methylase N-4/N-6 RPA1027 1128929 - 1129846 + | hypothetical protein TERM 841 1129877 - 1129908 + F 84 -10.9 -4.16943 | gap 1, opp_overlap 1129876 1129875 CGGCAGATATAAATT CGT-CATGCCCGGC TTTGT GCCGGGCATCCACG TTTTGCGGTATGCCG moaB 1129985 - 1130533 + | molybdopterin biosynthesis, protein B TERM 842 1131271 - 1131291 + G 78 -10.3 -4.0641 | opp_overlap 1131266, overlap 1131272 CGGACGAGAACGCCA CCGCCGGCG TGC TGCCGGCGC TTTATGTCAGTGCGA TERM 843 1131272 - 1131290 + G 72 -13.8 -3.03525 | opp_overlap 1131266, overlap 1131271 GGACGAGAACGCCAC CGCCGGCG TGC TGCCGGCG CTTTATGTCAGTGCG RPA1029 1130697 - 1131464 + | CoA transferase, subunit A RPA1030 1131461 - 1132213 + | CoA transferase, subunit B RPA1031 1133378 - 1132371 - | MarR family transcriptional regulator RPA1032 1134043 - 1133477 - | glycosyl transferase family protein TERM 844 1134249 - 1134289 + G 73 -13.9 -3.12668 | gap 1, overlap 1134256 1134259 CATCCAATGCCCTCA AGCGCCCGCCGGTCACGG CGCCCT CCGAG-CCGGTGGGCGCG TCTTCCCCTTTCCCC RPA1033 1134224 - 1135384 + | radical SAM family protein rnh2 1135479 - 1136393 + | ribonuclease H RPA1035 1136390 - 1137973 + | hypothetical protein polN 1138862 - 1138032 - | phage SPO1 DNA polymerase-related protein RPA1037 1139064 - 1140722 + | electron-transferring-flavoprotein dehydrogenase TERM 845 1140931 - 1140955 + F 89 -11.3 -4.26076 | CGACGCGATGCTGCC GGCTCGGCGGC CGG GCCAACGAGCC TTTTCCTGGAGCTAG RPA1038 1140980 - 1142764 + | TPR repeat-containing protein ispE 1142869 - 1143768 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 846 1143836 - 1143887 + T 76 -6.4 -4.41348 | gap 1, opp_overlap 1143837, overlap 1143808 1143803 1143837 1143839 1143840 CTCGCAGTTCAGACC ATCTCGGTATTCCGGGTTCGCTCGC TTT GCGAGCGC-CCCGGAATGACGGTCC TTTGTTTGAGGAAGA TERM 847 1143839 - 1143884 + T 89 -16.9 -3.18452 | gap 1, opp_overlap 1143837, overlap 1143808 1143803 1143837 1143836 1143840 GCAGTTCAGACCATC TCGGTATTCCGGGTTCGCTCGC TTT GCGAGCGC-CCCGGAATGACGG TCCTTTGTTTGAGGA TERM 848 1143840 - 1143883 + T 86 -18.2 -2.50589 | gap 1, opp_overlap 1143837, overlap 1143808 1143803 1143839 1143837 1143836 CAGTTCAGACCATCT CGGTATTCCGGGTTCGCTCGC TTT GCGAGCGC-CCCGGAATGACG GTCCTTTGTTTGAGG RPA1040 1144924 - 1143914 - | farnesyltranstransferase RPA1041 1145132 - 1145359 + | hypothetical protein RPA1042 1145352 - 1146131 + | methyltransferase small TERM 849 1146853 - 1146837 - g 77 -7.9 -4.31692 | overlap 1146838 AACTGATCAGGAAAA TCGGCGT CGA ACGCCGG CTCTACACCGCCGGC RPA1043 1146377 - 1147279 + | peptidase S49 TERM 850 1147291 - 1147309 + T 78 -11.6 -3.74693 | opp_overlap 1147285 1147284 1147282, overlap 1147292 TTGAAAGATGCACGG CGGCGCGG CCT CCGCGCCA TTTGGTCCCGTCAGC TERM 851 1147292 - 1147308 + T 79 -15.1 -2.84602 | opp_overlap 1147285 1147284 1147282, overlap 1147291 TGAAAGATGCACGGC GGCGCGG CCT CCGCGCC ATTTGGTCCCGTCAG RPA1044 1147691 - 1147380 - | hypothetical protein TERM 852 1147954 - 1147975 + H 78 -10.1 -4.07687 | TTGATTTGCCGGGGC GCGGCCG ATACGGTC CGGCCGC TTTTCCAAAAACCCT glyQ 1147992 - 1148942 + | glycyl-tRNA synthetase subunit alpha TERM 853 1148998 - 1148945 - f 83 -9.7 -4.25283 | gap 3, opp_overlap 1148947, overlap 1148920 1148946 1148949 ACGGGCGGACTAAAA GCGACAGCGCCTCTGCTCCCCTCCCC CTTGC GGGGAGGGGAGCAGCGA-G-T-TCGG ACTAATTACCCTCCC TERM 854 1148997 - 1148946 - f 73 -13.2 -3.14848 | gap 3, opp_overlap 1148947, overlap 1148920 1148945 1148949 CGGGCGGACTAAAAG CGACAGCGCCTCTGCTCCCCTCCCC CTTGC GGGGAGGGGAGCAGCGA-G-T-TCG GACTAATTACCCTCC TERM 855 1148947 - 1149000 + F 78 -15.2 -2.73483 | gap 1, opp_overlap 1148920 1148946 1148945 1148949 GGGCGGACTAAAAGC GACAGCGC-CTCTGCTCCCCTCCCC CTTGC GGGGAGGGGAGCAGCGAGTTCGGAC TAATTACCCTCCCCT TERM 856 1148998 - 1148949 - f 75 -14.2 -2.77781 | gap 1, opp_overlap 1148947, overlap 1148920 1148946 1148945 GCGGACTAAAAGCGA CAGCGC-CTCTGCTCCCCTCCCC CTTGC GGGGAGGGGAGCAGCGAGTTCGG ACTAATTACCCTCCC TERM 857 1149027 - 1149007 - f 72 -14 -2.78018 | overlap 1149004 AGTTCGGACTAATTA CCCTCCCC TGAAG GGGGAGGG TCGCCTGCCGCAGGC RPA1046 1149072 - 1149506 + | hypothetical protein TERM 858 1150607 - 1150588 - g 70 -6.4 -4.25104 | overlap 1150601 CGTGTTCCACGAAAA GCTCGG GACGCAAG CCGAGC GCATCGCCCGGATCG glyS 1149506 - 1151836 + | glycyl-tRNA synthetase subunit beta TERM 859 1153144 - 1153114 - g 73 -11 -3.68988 | TTCGAGCGAAGAGAA GGCGACCCCGACCT GGC AGGCCGAGCGCGCC GCGATCACCAAGGGG RPA1048 1152596 - 1153699 + | hypothetical protein RPA1049 1155209 - 1153713 - | hypothetical protein TERM 860 1154545 - 1154535 - G 74 -2.4 -4.77036 | GCTGAGGATCAAAAA CTGC GCC GCGG TGGTGATCTCGCGCG TERM 861 1155174 - 1155141 - G 77 -13.8 -3.37056 | AGGACCGACGGAGAA GAGCCCCGCCCGGC GGGGGA ACGGGACGGGGCTC TCCGATCCGGCCGCG RPA1050 1155473 - 1155628 + | hypothetical protein TERM 862 1156073 - 1156037 - g 85 -15.7 -3.6279 | AAAGCCCGCCAAGAA GCCCGCCGCCAACGCGG TTG CCGCGCCGAAGGCCGGC AAGTGGGTCTACACC TERM 863 1156507 - 1156528 + G 73 -14.5 -2.90615 | overlap 1156505 CGATGTACTCGGACG TGGTGCTCG GCTT CGAGCACCA TCATTTCGAGGAAAT TERM 864 1156686 - 1156635 - g 73 -12.1 -3.47322 | gap 1, overlap 1156631 GGCCAGTACAAGGAA GCCGTGGCGCGCGAGACCGGCGAG GACTT CCCGCAGGATCCGCACGCC-CAGC TGTGGGGCGCGATCG RPA1051 1156005 - 1158746 + | pyruvate phosphate dikinase TERM 865 1158770 - 1158803 + F 81 -13.2 -3.70863 | opp_overlap 1158769, overlap 1158772 1158776 1158791 CGCAATTGATCAGAT TTCGAATGGCCGGG CTTCGT CCCGGCCATTTGTA TTTGGCTGGTATCTA TERM 866 1158772 - 1158801 + F 85 -15.8 -3.43109 | opp_overlap 1158769, overlap 1158770 1158776 1158791 CAATTGATCAGATTT CGAATGGCCGGG CTTCGT CCCGGCCATTTG TATTTGGCTGGTATC TERM 867 1158776 - 1158797 + F 95 -13 -4.35044 | opp_overlap 1158769, overlap 1158772 1158770 1158791 TGATCAGATTTCGAA TGGCCGGG CTTCGT CCCGGCCA TTTGTATTTGGCTGG RPA1052 1159062 - 1160492 + | cell wall hydrolase, SleB TERM 868 1160498 - 1160528 + T 76 -9.1 -4.0825 | opp_overlap 1160493, overlap 1160505 GGGCAACTAAGCGGG CAGCGC-GCACAGGC CTC GCCTGTGTTGC-CTG TTGTTTCCTTGACAG TERM 869 1160505 - 1160521 + T 72 -12.3 -3.2661 | overlap 1160498 TAAGCGGGCAGCGCG CACAGGC CTC GCCTGTG TTGCCTGTTGTTTCC nadC 1161924 - 1161049 - | nicotinate-nucleotide pyrophosphorylase TERM 870 1161187 - 1161210 + g 70 -5.9 -4.17556 | gap 1, overlap 1161153 AGCTTCGAGCACGAC GCGGCCGGCG CTCAT CGCCA-CCGC TTTCTTCAGCGTGTC nadB 1163557 - 1161941 - | L-aspartate oxidase nadA 1164763 - 1163651 - | quinolinate synthetase RPA1056 1165116 - 1166102 + | putative dehydrogenase (zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) TERM 871 1166139 - 1166158 + F 70 -7.8 -4.08706 | opp_overlap 1166138 1166135 1166134 1166139, overlap 1166135 ACTTTACCAACCAAG CTGCGCCA TTCT TGCCGCAG TTTGTATGGTAAGGA RPA1057 1166217 - 1166786 + | hypothetical protein TERM 872 1168293 - 1168324 + G 73 -12.2 -3.40899 | gap 1, opp_overlap 1168288 CGGCATTCAAGCGTC GCTTCGGCCGGCCGC CCA GCG-CCGGCAGACGC TTCTCATAAGCCCTT RPA1058 1167398 - 1168333 + | AraC family transcriptional regulator RPA1059 1168419 - 1170635 + | outer membrane protein, TonB-dependent receptor RPA1060 1170643 - 1171086 + | hypothetical protein TERM 873 1171299 - 1171311 + G 70 -6.2 -4.258 | overlap 1171297 CCGACTGGATTGATC GCCG GGCGG CGGC TTTCTTCATGGCTCA tcmP 1171079 - 1171933 + | polyketide synthesis protein RPA1062 1174602 - 1171930 - | hypothetical protein TERM 874 1173486 - 1173439 - G 76 -14.8 -3.20858 | gap 1, overlap 1173427 1173429 CACCAGACCGACCAA GCCTGCCGCAGCGCCGACCGC GGCGGTG GCGGCCG-CGGCGCGCCAGGC GATGCCGAGCGTTGC TERM 875 1173933 - 1173902 - G 72 -8.7 -4.07687 | gap 2, overlap 1173889 1173886 1173903 ACCGGCGTCGCAAAA CCGGCGACGACGCCG AGCC CGGCGA-GT-GCCGG TCCGTGGAGCAGTGC TERM 876 1174685 - 1174657 - R 74 -13.8 -2.88822 | gap 1, opp_overlap 1174661, overlap 1174654 GCTTTGACAGAATTA CCGCCGGCC-GCG CACG CGCAGGCCGGGGG CGGGCCGTTCCTGCA RPA1063 1175649 - 1174654 - | hypothetical protein RPA1064 1176152 - 1175646 - | hypothetical protein RPA1065 1176836 - 1176219 - | metal dependent phosphohydrolase TERM 877 1176469 - 1176483 + g 72 -8.5 -4.08692 | AATCGGATGTGGATC GCGCC GAGCA GGCGC TTTTCGACCCGCTTG TERM 878 1176803 - 1176760 - G 74 -10.3 -3.767 | gap 2 GAGGGATCGAGCAAA TCGAGCCTGCGGCCGGACAGC ATCC GCTG-CCAGACGC-GGCTGGA GGCTTGCGACGATTT RPA1066 1176912 - 1177184 + | hypothetical protein tag 1177847 - 1177191 - | DNA-3-methyladenine glycosylase I TERM 879 1177220 - 1177244 + g 100 -14.2 -5.21709 | opp_overlap 1177190 1177235 ACGGAGCCCTCTTCG CCGGCGCTGC AGAAC GCCGCGCCGG TTTTTTCATCTGCCC RPA1068 1178725 - 1177844 - | glycine cleavage T protein (aminomethyl transferase) TERM 880 1179832 - 1179814 - g 75 -4.5 -4.63932 | overlap 1179823 1179826 TACGCTGGAAGAAAA GGCCAAA ACCTA TCCGGCC TCGCCATCGGGCATG TERM 881 1179928 - 1179952 + G 70 -11.3 -3.60627 | overlap 1179931 1179936 ACGCTTCGTTGATCT CACCAGCGCCG GCC CGGCGCGGCTG TTTGGCATCGCCTGC pyrC 1178873 - 1180207 + | dihydroorotase TERM 882 1180666 - 1180636 - f 71 -8.2 -3.92324 | GTGGTTAACAGGAAA GCAACGCAACAGGC GCA GCATTTCGCGTCGC ACGATCGCCGGGATC RPA1070 1180716 - 1180871 + | hypothetical protein RPA1071 1181155 - 1180892 - | hypothetical protein RPA1072 1181726 - 1181286 - | hypothetical protein TERM 883 1181667 - 1181681 + g 75 -11.4 -3.72576 | ACGCTTCAGCATGGC CGGCCT GAT AGGCCG TTTCATCGGCCGCAG RPA1073 1182160 - 1181726 - | NUDIX hydrolase RPA1074 1182522 - 1182166 - | hypothetical protein TERM 884 1182655 - 1182671 + H 85 -3.5 -5.27335 | overlap 1182656 AGCTGTGGATTCACT CGACGCC ATC GGCGGCA TTTTTGTTTACCGAA RPA1075 1182725 - 1183498 + | hypothetical protein RPA1076 1185034 - 1183607 - | FAD linked oxidase-like TERM 885 1184128 - 1184099 - G 81 -15 -3.53224 | overlap 1184113 1184114 GATTCCGTCTTCAAA GCCGCGCTCGAG AATCGA CTCCAGCGCGGC GCGGGCGTCGTCGCG RPA1077 1186199 - 1185153 - | SUA5/yciO/yrdC domain-containing protein TERM 886 1186063 - 1186084 + g 71 -13.7 -2.92475 | gap 1, overlap 1186065 AACGCGACCAGCCCA CCGC-CGCGC AGC GCGCGCGCGG CTTTGTCCGCATCCG TERM 887 1186065 - 1186085 + g 77 -11.1 -3.87815 | overlap 1186063 CGCGACCAGCCCACC GCCGCGC AGCGCGC GCGCGGC TTTGTCCGCATCCGC RPA1078 1186379 - 1187281 + | AraC family transcriptional regulator RPA1079 1187407 - 1188693 + | 4-methylmuconolactone transporter TERM 888 1188740 - 1188710 - g 85 -13.9 -4.09685 | overlap 1188695 GCTGATCCTTCAAAA GGTCCGGCTCCGG CGTGT CCGGGGCCGGATC CGGCCCCGCGCCGTC RPA1080 1188686 - 1189588 + | 2-pyrone-4,6-dicarboxylate hydrolase TERM 889 1189605 - 1189630 + T 88 -17.6 -3.06302 | CTTTCACGCGCGCGA CCGCCGCCCT GACCGG AGGGCGGCGG TTGGATAAAAATCCT RPA1081 1190549 - 1189896 - | hypothetical protein RPA1082 1190900 - 1192234 + | hypothetical protein TERM 890 1192282 - 1192325 + F 78 -15.2 -2.75064 | overlap 1192290 1192319 CGCCTCGCTCTCTTC CGGGAATTGCAGCGACCGGA CACG TCCGGTCGCCGATCTTCCCG TGGTTGCGTCGCGGA RPA1083 1192349 - 1192669 + | hypothetical protein TERM 891 1192742 - 1192781 + G 78 -6.4 -4.61633 | gap 1, overlap 1192743 GCGGCGTGGCGTTTG CCGGTGTGGCG-TCGGC GCAGTCG GCCGATCTCTACACCGA TTTTTCCGGCTATCT csgB 1192666 - 1193157 + | minor curlin subunit precursor (fimbrin sef17 minor subunit) RPA1085 1193154 - 1193570 + | hypothetical protein csgG 1193607 - 1194563 + | curli production assembly/transport component csgg precursor RPA1087 1194566 - 1195360 + | transglycosylase SLT domain-containing protein TERM 892 1195390 - 1195363 - T 71 -9 -3.71378 | opp_overlap 1195363 1195359 1195358, overlap 1195367 1195379 GACGGCATATTGAAA CCGACGTGCCGA TGAA CCGGCACGGCCG ATCATGGCAGGCGGT RPA1088 1195730 - 1195392 - | hypothetical protein RPA1089 1195939 - 1196199 + | hypothetical protein TERM 893 1196253 - 1196272 + F 86 -16.4 -3.20723 | overlap 1196256 AGTCGTCCCTGCGTG CGCGGCGG TTCG CCGCCGCG TTCGGTTGATCAAGA TERM 894 1196256 - 1196312 + F 100 -22.4 -3.05769 | gap 1, overlap 1196253 CGTCCCTGCGTGCGC GGCGGTTCGCCGCCGCGTTCGGTTGAT CAAG ATCAACTGGACGCTGCGGCGC-TCGCC TCTATCCTTTGCAGG TERM 895 1196811 - 1196787 - g 85 -9.9 -4.18018 | GGCGGTGATCCAAAA CGTCGCGTTCG CCT CGATCGAGACG CGGCTGGCCTCGCGC RPA1090 1196347 - 1197024 + | Crp/Fnr family transcriptional regulator TERM 896 1197256 - 1197274 + G 73 -6.6 -4.4017 | CGGCGTCGTCCCGCT GCTGACCG CGG CGATCGGC TTTTGTCCGGCTTAC RPA1091 1197140 - 1197328 + | hypothetical protein TERM 897 1197344 - 1197384 + F 72 -7.5 -4.2123 | gap 1, overlap 1197349 CGTCCACTACCCAAG TGTGGCTCTCGGG-GCGG CGCAGC CCGCTCCCGGGAGTTGCC TTTGTTGAATAGGTG TERM 898 1197349 - 1197379 + F 74 -12.6 -3.38162 | gap 1, overlap 1197344 ACTACCCAAGTGTGG CTCTCGGG-GCGG CGCAGC CCGCTCCCGGGAG TTGCCTTTGTTGAAT RPA1092 1197405 - 1197776 + | carboxymuconolactone decarboxylase ribB 1197881 - 1198990 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 899 1200011 - 1199962 - g 77 -11.3 -3.88232 | opp_overlap 1199995 GCTCGTACAGAAGAA GCTCGCCGACATGGAGACCGAGA TTAC CCTCGGTCTGCAGGCCAGCTTGC GCGTCGGCCGGCTGA RPA1094 1199051 - 1200265 + | glutaryl-CoA dehydrogenase TERM 900 1200266 - 1200286 + F 72 -7.5 -4.16284 | overlap 1200255 CAGGCGTTTTCTTAA GGCGTGG TGTAAGT CCGCGCC TTTGTTCCGCGCTCT RPA1095 1200414 - 1201391 + | Beta-lactamase-like RPA1096 1203155 - 1201404 - | methyl-accepting chemotaxis sensory transducer RPA1097 1203352 - 1204098 + | hypothetical protein RPA1098 1204450 - 1204145 - | hypothetical protein ruvC 1204649 - 1205173 + | Holliday junction resolvase ruvA 1205358 - 1205975 + | Holliday junction DNA helicase motor protein RPA1101 1205972 - 1206397 + | hypothetical protein ruvB 1206575 - 1207624 + | Holliday junction DNA helicase B RPA1103 1207632 - 1208096 + | 4-hydroxybenzoyl-CoA thioesterase TERM 901 1208877 - 1208850 - g 70 -13.4 -3.05463 | gap 1, opp_overlap 1208851 1208852 1208866 1208868 1208868 ATCGTGCTGATCGAA GCCGCGCCGCGCA TTC TGC-CGGCGCTGC CGCCGCGTATTTCGG ndh 1208196 - 1209506 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase RPA1105 1209652 - 1210866 + | OpgC protein, require for succinylation of osmoregulated periplasmic glucans RPA1106 1210924 - 1211391 + | hypothetical protein RPA1107 1211408 - 1211956 + | TetR family transcriptional regulator RPA1108 1212076 - 1212480 + | DGPF domain-containing protein RPA1109 1212477 - 1213745 + | RNA polymerase ECF-type sigma factor RPA1110 1214554 - 1213766 - | putative 3-oxoacyl-acyl carrier protein reductase TERM 902 1214983 - 1215018 + r 74 -13.3 -3.34895 | gap 1, opp_overlap 1214967 1214987, overlap 1214962 1214984 1214987 1215016 CTGATCGTCGCTTAC GGAAGCGCCGCCTGCG TTGTT TGC-GGCGGCGCTTCG TTCGTTGGCACTAAC TERM 903 1214984 - 1215017 + r 80 -16.8 -2.60723 | gap 1, opp_overlap 1214967 1214987, overlap 1214962 1214983 1214987 1215016 TGATCGTCGCTTACG GAAGCGCCGCCTGCG TTGTT TGC-GGCGGCGCTTC GTTCGTTGGCACTAA TERM 904 1214987 - 1215014 + r 76 -12.7 -3.45366 | gap 1, opp_overlap 1214967 1214987, overlap 1214962 1214984 1214983 TCGTCGCTTACGGAA GCGCCGCCTGCG TTGTT TGC-GGCGGCGC TTCGTTCGTTGGCAC RPA1111 1215313 - 1215047 - | hypothetical protein RPA1112 1215473 - 1215892 + | DGPF domain-containing protein TERM 905 1216111 - 1216093 - g 70 -11.7 -3.37612 | GGCAATCTCAAGGAA GCGCTGC TGCAG GCAGCGC TTGGGCTGATCGCGG TERM 906 1216730 - 1216704 - g 81 -11.4 -3.9941 | overlap 1216689 GCCTGCACAACCAAA GCGATCCGGCCC CTG GGGCCCGTCCGC CTAATCGCGCCGCTC RPA1113 1216030 - 1216734 + | TetR family transcriptional regulator RPA1114 1216877 - 1217344 + | hypothetical protein TERM 907 1217375 - 1217410 + F 100 -8.1 -5.25803 | overlap 1217378 GACCCTCCAGCGCCA ACCGCCGCCCGCCTG TGCCCC CAGGTGGGCGGCTTC TTTTTTGTCGCGCTT TERM 908 1217378 - 1217407 + F 100 -18.6 -4.72201 | overlap 1217375 CCTCCAGCGCCAACC GCCGCCCGCCTG TGCCCC CAGGTGGGCGGC TTCTTTTTTGTCGCG RPA1115 1217494 - 1217961 + | hypothetical protein RPA1116 1217945 - 1218850 + | RNA polymerase sigma factor SigJ TolQ 1219157 - 1219867 + | MotA/TolQ/ExbB proton channel TolR 1219902 - 1220372 + | putative tolR protein, uptake of enterochelin; tonB-dependent uptake of B colicins TolA 1220421 - 1221404 + | putative TolA tolB 1221477 - 1222811 + | translocation protein TolB TERM 909 1222818 - 1222870 + F 76 -13.5 -3.25102 | opp_overlap 1222831, overlap 1222816 1222819 CTGTCCTGACCACTG AGCGTTGAACTCACCGTAAATTCCG AGC CGAGATTTACGGTGAGTTCCGCACG TGTTGTCGGTGCCGT TERM 910 1222819 - 1222869 + F 83 -17 -2.5474 | opp_overlap 1222831, overlap 1222818 1222816 TGTCCTGACCACTGA GCGTTGAACTCACCGTAAATTCCG AGC CGAGATTTACGGTGAGTTCCGCAC GTGTTGTCGGTGCCG TERM 911 1225296 - 1225271 - g 84 -9 -4.56597 | opp_overlap 1225271, overlap 1225273 GGGGTGCGCCAAAAA GACGGCAAAG TGCTTT CTTTGCCGAC TCGATCGATCGCCTA TERM 912 1225294 - 1225273 - g 77 -10.2 -3.90048 | opp_overlap 1225271, overlap 1225271 GGTGCGCCAAAAAGA CGGCAAAG TGCTTT CTTTGCCG ACTCGATCGATCGCC RPA1121 1222982 - 1225312 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) TERM 913 1226077 - 1226067 - g 83 -8.2 -4.68593 | overlap 1226069 TCCAGGATTGAAAAA GCCC ATC GGGC TAATGGAGATCGACT RPA1122 1225507 - 1226256 + | hypothetical protein TERM 914 1226302 - 1226327 + F 71 -14 -2.6563 | opp_overlap 1226284, overlap 1226298 1226297 AGCTGGTTTTCAGAT CGATCGCCGG CATCGA CCGGCGGTCG TCAATTATTGGAAGC TERM 915 1226857 - 1226818 - g 73 -13.6 -3.30124 | overlap 1226821 CGCGACCCTCGACAA GCAGGTGCAGTGGCTGCA GACT TACAGCCGCTACACCTTC ACCATCGAAGGCCAC TERM 916 1226854 - 1226821 - g 71 -13.9 -2.8294 | overlap 1226818 GACCCTCGACAAGCA GGTGCAGTGGCTGCA GACT TACAGCCGCTACACC TTCACCATCGAAGGC RPA1123 1226585 - 1227082 + | OmpA/MotB TERM 917 1227110 - 1227127 + F 100 -14.1 -5.45802 | opp_overlap 1227110 ATCGAAGTCGCAAAA CGGCGCC GCGG GGCGCCG TTTTTGTTTTCGGCG TERM 918 1227127 - 1227110 - f 93 -14.1 -4.1466 | opp_overlap 1227110 ATCGAAGTCGCAAAA CGGCGCC GCGG GGCGCCG TTTTTGTTTTCGGCG TERM 919 1227130 - 1227169 + F 74 -4.8 -4.63527 | overlap 1227132 CCGCGGGGCGCCGTT TTTGTTTTCGGCGGCGGC TTTG GCCGTCGCCTCAGTCACA TTTTTGGCGTAGTAC TERM 920 1227618 - 1227651 + G 74 -14.5 -3.07816 | gap 1 TCAGCCGCAACCGGC CGCGCCGC-AGGGCGG CGG CCGCCGTGGCGACGCG TTCGATCCGTCGCGC TERM 921 1227866 - 1227844 - g 71 -12.6 -3.33696 | opp_overlap 1227855 TCCGCCGCGAAGCAA CCGCCCGCCG CCA CAGCCGGCGG CGCCTTGACGACGCA TERM 922 1228026 - 1228038 + G 72 -4.8 -4.56597 | GGATGCGCAGTATTG GCTC GGCGA GAGC TTTTTCCAGCGCCAG TERM 923 1228124 - 1228108 - g 77 -10.1 -4.02424 | AGCAAGCACGAGAAA TCCGGCA AGG CGCCGGA TGCGCTGCTGCGGCT RPA1124 1227238 - 1228275 + | hypothetical protein TERM 924 1228399 - 1228447 + G 80 -17.4 -2.64616 | gap 1, overlap 1228401 GCCGACTGGAAGGCG GCGCCGGCGA-TCGTGCTGGCTG TCTC CGGCGGGCCCGACTCGCTGGCGC TGATGTGGCTCGCCG RPA1125 1228330 - 1229370 + | tRNA(Ile)-lysidine synthetase-like ftsH 1229602 - 1231518 + | ATP-dependent metalloprotease FtsH TERM 925 1231540 - 1231571 + F 95 -19.6 -3.12351 | opp_overlap 1231547, overlap 1231547 CGGCCAACCTGACTT CGAAAAACGCGGCG GCGA CGCCGCGTTTTTTG TTGCGTGTCGCCCGC TERM 926 1231564 - 1231547 - f 100 -14.1 -4.59773 | opp_overlap 1231540 1231547 CCTGACTTCGAAAAA CGCGGCG GCGA CGCCGCG TTTTTTGTTGCGTGT TERM 927 1231547 - 1231564 + F 100 -14.1 -5.49234 | opp_overlap 1231547, overlap 1231540 CCTGACTTCGAAAAA CGCGGCG GCGA CGCCGCG TTTTTTGTTGCGTGT RPA1127 1231651 - 1232400 + | AzlC-like protein RPA1128 1232397 - 1232714 + | branched chain amino acid ABC transporter RPA1129 1232997 - 1233575 + | TetR family transcriptional regulator TERM 928 1234870 - 1234821 - g 77 -10.7 -3.87373 | gap 1, opp_overlap 1234865, overlap 1234823 GAGATGTCCGAGAAA TACGGCCTGCGCGTCGCCAACGTA TTC CACGCCGGCGACG-GCAATCTGCA TCCGCTGATCCTGTA TERM 929 1234868 - 1234823 - g 70 -11.1 -3.5241 | gap 1, opp_overlap 1234865, overlap 1234821 GATGTCCGAGAAATA CGGCCTGCGCGTCGCCAACGTA TTC CACGCCGGCGACG-GCAATCTG CATCCGCTGATCCTG glcD 1233699 - 1235192 + | glycolate oxidase subunit GlcD RPA1131 1235355 - 1236596 + | FAD linked oxidase-like glcF 1236593 - 1237906 + | glycolate oxidase subunit, (Fe-S)protein, GlcF RPA1133 1237981 - 1238919 + | hypothetical protein TERM 930 1238951 - 1238973 + F 95 -20.6 -3.21747 | ATCCTGGTTTGCAGA GGCCGCGGTC CTG GACCGCGGCC TTCGTCGTCACGTCC RPA1134 1239338 - 1240309 + | hypothetical protein TERM 931 1240326 - 1240362 + T 100 -10.2 -4.9218 | gap 1, opp_overlap 1240316 1240333, overlap 1240333 ATAAATCCCTTCCGG GGACTAAGGGCGGCAGA GCAA TCTGCCGCCCTTT-TCG TTTTTCTGCTCACTC TERM 932 1240333 - 1240356 + T 100 -18.2 -4.82678 | opp_overlap 1240333, overlap 1240326 CCTTCCGGGGACTAA GGGCGGCAGA GCAA TCTGCCGCCC TTTTCGTTTTTCTGC TERM 933 1240356 - 1240333 - T 91 -18.2 -3.14132 | opp_overlap 1240333 1240326 CCTTCCGGGGACTAA GGGCGGCAGA GCAA TCTGCCGCCC TTTTCGTTTTTCTGC RPA1135 1242328 - 1240568 - | ABC transporter permease/ATP-binding protein TERM 934 1242281 - 1242309 + g 77 -13.2 -3.61589 | opp_overlap 1242278 1242276 1242279, overlap 1242279 GGCACTGAAATACGG CGC-GGCGATCCGC CAG GCGG-TCGCCAGCG TTCCTTTGATGTTGC ictP 1242599 - 1244263 + | putative L-lactate permease TERM 935 1244291 - 1244314 + F 100 -13.8 -4.41047 | opp_overlap 1244291 CTGAATTGCGCCAAA GCCCCGCGGT CTCG GTCGCGGGGC TTTTCGTTGCAGGCT TERM 936 1244314 - 1244291 - f 75 -12.4 -3.55622 | opp_overlap 1244291 CTGAATTGCGCCAAA GCCCCGCG GTCTCGGT CGCGGGGC TTTTCGTTGCAGGCT RPA1137 1244408 - 1244824 + | hypothetical protein RPA1138 1246332 - 1244827 - | FAD dependent oxidoreductase RPA1139 1247638 - 1246445 - | hypothetical protein TERM 937 1247821 - 1247796 - R 100 -20.5 -4.56597 | opp_overlap 1247800 GTGCGGCGCCAAAAA GCAAGGCCGCC CGGA GGCGGCCTTGC ATGATCGATCTTCAG TERM 938 1247800 - 1247817 + r 75 -14.1 -3.10343 | opp_overlap 1247796 GGCGCCAAAAAGCAA GGCCGCC CGGA GGCGGCC TTGCATGATCGATCT groEL 1249496 - 1247853 - | chaperonin GroEL groES 1249832 - 1249536 - | co-chaperonin GroES RPA1142 1250132 - 1250647 + | hypothetical protein TERM 939 1251835 - 1251857 + G 79 -11.2 -3.99324 | AGGTCGGGATGGTCT GCGCCCTGGC GGC GCTGGGGTGC TTTCTGGTGCTGCAG RPA1143 1250691 - 1251899 + | major facilitator transporter RPA1144 1252706 - 1251915 - | hypothetical protein TERM 940 1252918 - 1252937 + H 70 -7.2 -3.99405 | gap 1, overlap 1252918 TGCTGTTCGCGTTTA CC-AAACCG ATC CGGTTTTGG TTTCTGATCCGTTGC RPA1145 1252992 - 1253795 + | ErfK/YbiS/YcfS/YnhG TERM 941 1253855 - 1253831 - T 85 -15.7 -3.40403 | overlap 1253810 GCCGTCTTACGACAA CGGCCGCCC TTTTTGG GGGCGGCCG TTGCGCGTTGGCGGA RPA1146 1254737 - 1253883 - | putative periplasmic ligand-binding sensor protein TERM 942 1254229 - 1254208 - G 71 -13.7 -2.81133 | gap 1, overlap 1254188 GAGCCACCGACCACA CCGGCGGCGG CTG CCGCCGC-GG TGCCGAGGAACGAAC TERM 943 1254532 - 1254499 - G 79 -7.4 -4.47551 | overlap 1254494 ATCGAATCGAGAAAA CCG-CCACGCTCCTGC GATT GC-GGCGCATGGTCGG CTTCCAGTTCCTGGA RPA1147 1255746 - 1254853 - | hypothetical protein RPA1148 1256786 - 1255743 - | glycosyl transferase, family 2 TERM 944 1256041 - 1255995 - G 70 -6.5 -4.19624 | gap 1, overlap 1255996 TAGGCCGAACAGAAA TGC-GCTGATCGCCAGCACG ACGCCGAG CAGGCTGGCGATCCGCAGCG GGGCCACCGAGAACG TERM 945 1256090 - 1256148 + g 89 -14.5 -4.07568 | gap 1, opp_overlap 1256103 ACAGCCCGATCAGCC GCGCGGTCGAGAACGTGCTGAAGCCGTG TGAG CGCGGCTCCGGTTCGTAGTCGACC-CGC TTTTGGCGGAAGCCG TERM 946 1256321 - 1256307 - G 82 -11.4 -4.10161 | GATCAGCGTGTAAAA GCTGCG CAC CGCAGC GCGCCGCAGCGCCGG TERM 947 1256848 - 1256868 + r 75 -13.9 -3.0701 | overlap 1256847 ATGGTGGTTCCACCC GCCGGCGCC ACC GGCGCCGGG TTGCCTCGGCATTAT hisG 1257857 - 1256880 - | ATP phosphoribosyltransferase TERM 948 1257728 - 1257702 - G 72 -14.4 -2.98823 | opp_overlap 1257722 GCTGGCCGACAGATA GGCGACCTCGAC ATT GTCGAGGCCGGC GATCGTGCCGCGATA hisZ 1259002 - 1257854 - | ATP phosphoribosyltransferase regulatory subunit TERM 949 1258236 - 1258257 + g 85 -12.9 -4.1196 | opp_overlap 1258217, overlap 1258251 1258255 TTGATCTTGTCGAGC GCGTCGCGC GGCA GCGCGCCGC TTTTCAGCGTCGATT TERM 950 1258556 - 1258582 + g 72 -11.4 -3.5393 | GAACAGCGCGACGTC GCCGGTGCGGAC CTC GACCTCGCCGGC TTTGAGCGCGGTGGT TERM 951 1258946 - 1258994 + g 82 -12.1 -3.99592 | overlap 1258948 1258949 CGCGAAGGATTGCAG CAGCGCCTCCGCCCACGCGGCGG ATC CGGTCGCGCGAGCGGCGGCGGTC TTTGTCATGATCGGT TERM 952 1258948 - 1258992 + g 81 -14.7 -3.58864 | overlap 1258946 1258949 CGAAGGATTGCAGCA GCGCCTCCGCCCACGCGGCGG ATC CGGTCGCGCGAGCGGCGGCGG TCTTTGTCATGATCG TERM 953 1258949 - 1258991 + g 85 -18.2 -2.74836 | overlap 1258948 1258946 GAAGGATTGCAGCAG CGCCTCCGCCCACGCGGCGG ATC CGGTCGCGCGAGCGGCGGCG GTCTTTGTCATGATC RPA1151 1259902 - 1259147 - | hypothetical protein TERM 954 1259560 - 1259589 + g 70 -11.3 -3.55203 | overlap 1259548 CCTGGGTGTGCTGGG TGAGCACCGGCTG CAGC CGGCCGGCGCCCA TTTCCACAGCCTTTT RPA1152 1260277 - 1260810 + | hypothetical protein ubiA 1260807 - 1261757 + | prenyltransferase RPA1154 1262317 - 1261793 - | hypothetical protein TERM 955 1261918 - 1261937 + g 73 -10.6 -3.65812 | opp_overlap 1261877 GGTGACGGCGGCGGC GCTGCGCG GGTT CGCGCTGC TTGTCTTCGGGAAGC TERM 956 1262278 - 1262250 - G 100 -22.5 -2.91383 | opp_overlap 1262277 ATCGGCAGTGAGAGA GGGTCGAGCCGCA AGT CGCGGCTCGACCC GGCGAGGTTAGCCCC RPA1155 1262616 - 1264013 + | peptidase U62, modulator of DNA gyrase RPA1156 1264072 - 1264815 + | putative myo-inositol monophosphatase 2 family protein RPA1157 1264853 - 1265101 + | hypothetical protein TERM 957 1265093 - 1265081 - f 74 -4.7 -4.5448 | GATCCAGAAAAAGAA GCCCG GTC CGCGC AGCACTGATCGCGCG RPA1158 1265171 - 1266475 + | three-deoxy-D-manno-octulosonic-acid transferase-like TERM 958 1267349 - 1267335 - g 73 -4.2 -4.68593 | overlap 1267338 GTCACGACCGAAAAA GATCTG GCG CGGATC GGCGGCGCGCAGCAG lpxK 1266468 - 1267490 + | tetraacyldisaccharide 4'-kinase TERM 959 1267486 - 1267504 + T 71 -13.2 -3.05844 | AGCTCGCCGGGCGGC GCTGAGAC GCG GTCTCAGC TCTTGGGCTGAAACG RPA1160 1267835 - 1267500 - | hypothetical protein TERM 960 1267776 - 1267746 - G 85 -13.4 -4.08216 | gap 1 CGATCTCCTGGAAAA CCGCAG-GTTGCG GAACGA CGCAACGCTGCGG GTCGATACACCCTGA xseA 1269489 - 1267876 - | exodeoxyribonuclease VII large subunit garS 1269727 - 1271010 + | phosphoribosylamine--glycine ligase RPA1163 1271174 - 1272082 + | epoxide hydrolase RPA1164 1272512 - 1272066 - | CMP/dCMP deaminase, zinc-binding TERM 961 1272875 - 1272855 - g 72 -5.4 -4.30719 | overlap 1272857 GGGCCGGAGAAGAAA TTCGCCAA GCGCG CCGGCGAA GGCGCCGGTGAGGGC TERM 962 1273454 - 1273472 + G 70 -13.1 -3.05384 | opp_overlap 1273451 1273466 CCGGTTCGACAAGCC CCGCGGC GACAA GCCGCGG TTCGATCGCGGCGAG RPA1165 1272678 - 1274873 + | pseudouridine synthase Rsu TERM 963 1274910 - 1274953 + F 72 -13.9 -2.71791 | gap 2, overlap 1274909 TTGGCCTTGCAGCGC GCACGGCTGAACCTCTCCCCG CGTG CGGGGAGAGGT-C-GACGCGC ATTTGCGCGGCGGGT RPA1166 1275097 - 1275678 + | N-6 adenine-specific DNA methylase yfcB 1276904 - 1275882 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 964 1276837 - 1276886 + g 95 -6.3 -5.27476 | overlap 1276823 GCGGGTTTCGCCTTC GCGACAGCCGTCTTCGCAGCT TTCGGCCT AGCTGCCTTGGCGGCTTTTGC TTTTGTTTTCTTCGC moaE 1277371 - 1276904 - | molybdopterin biosynthesis MoaE moaD 1277648 - 1277397 - | molybdopterin converting factor, subunit 1 TERM 965 1277562 - 1277595 + g 73 -13.9 -3.13403 | gap 1, opp_overlap 1277555 1277552, overlap 1277535 1277537 1277560 GCCAATCAGGTCGGC GACGGTTGTCACCGCC GGC GGCGGTT-CGACCGTC TCTTCGTCGACGCCG pgsA 1278271 - 1277645 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 1280525 - 1278411 - | excinuclease ABC subunit C TERM 966 1280151 - 1280175 + g 73 -11.3 -3.70751 | CAGCACCTGGCCTGT GGGGCGGGCGT AGG ACGCCAGCCGC TTCTTCACGTTCTTC RPA1172 1280779 - 1281459 + | outer membrane protein TERM 967 1281543 - 1281566 + T 100 -19.6 -5.0065 | AACTTGGATCATCAC TCCCGGCCGG TTTT CCGGCCGGGA TTTTCTTTGTCGGTG cspA1 1282138 - 1281878 - | cold-shock DNA-binding domain protein RPA1174 1283224 - 1282367 - | hypothetical protein TERM 968 1282588 - 1282619 + g 74 -12.2 -3.62046 | gap 1 CGGCAGTCCCGGCCA CCGCAGCGGCCAGCG CCT CGGTGGC-GCGGCGG TTCTTGACCGGGTAC TERM 969 1282813 - 1282841 + g 72 -14.5 -2.70932 | opp_overlap 1282801 1282802 1282804 CAACCACCCGGCCCT GCGGGTCGTGGCG CAG CGCCGCGATCAGC TGCTTGCGCGCCACC RPA1175 1283518 - 1283913 + | response regulator receiver (CheY-like protein) TERM 970 1283946 - 1283976 + T 100 -14 -5.14563 | opp_overlap 1283950, overlap 1283950 CTTCCGCACAGCTTT AGAACGCGCTCCTC ATC GAGGGGCGCGTTTG TTTTTTGCTGCAGGA TERM 971 1283950 - 1283972 + T 100 -17 -5.0917 | opp_overlap 1283950, overlap 1283946 CGCACAGCTTTAGAA CGCGCTCCTC ATC GAGGGGCGCG TTTGTTTTTTGCTGC TERM 972 1283972 - 1283950 - T 82 -14.8 -3.32343 | opp_overlap 1283950 1283946 CGCACAGCTTTAGAA CGCGCTCCTC ATC GAGGGGCGCG TTTGTTTTTTGCTGC RPA1176 1284394 - 1283999 - | hypothetical protein RPA1177 1284810 - 1284607 - | 4-oxalocrotonate tautomerase hisS 1286521 - 1284950 - | histidyl-tRNA synthetase TERM 973 1285399 - 1285389 - G 70 -8.2 -3.92075 | overlap 1285390 ACGCCGATCGAGAAA CCGG TCG CCGG CACCGGCTCGCCGCG TERM 974 1286486 - 1286500 + g 89 -5.6 -5.24449 | overlap 1286467 1286469 1286487 GCGCGGCAGCCGGGC GCGCAG TTT CTGCGG TTTTTTCGGTTTCTC RPA1179 1286629 - 1288083 + | beta alanine--pyruvate transaminase TERM 975 1288424 - 1288376 - g 93 -19.5 -2.78463 | AGGCTGGCGATCAGA TCGCCGACCTGTCGCGCGGTACC GCC GATCTCGCCCGCCAGGTCGGCGA ATTCGGCCGGCGGCT RPA1180 1288180 - 1289745 + | putative cylclic diguanylate phosphodiesterase (EAL) RPA1181 1289758 - 1290612 + | HAD-superfamily hydrolase, subfamily IIA RPA1182 1292707 - 1290644 - | hypothetical protein TERM 976 1291707 - 1291756 + g 83 -13.5 -3.85698 | TGCTGGAACAGTTCG CGGGTCGGGAAGGCGATCAGCGA CAAT TCGTTGATCGGCGTGCCGTCCTG TTTCTCCGGCGGCCG RPA1183 1295699 - 1292874 - | double-transmembrane region-like TERM 977 1293097 - 1293115 + g 71 -13.8 -2.83715 | GACACGCCGTCGCCG CCGCGCGC CGG GCGCGTGG TGTCGTCATCGTCGG TERM 978 1294412 - 1294436 + g 74 -12.7 -3.55622 | GCTTCTCCCAGGTCA GGCTGCCGCCG AGG CTGCGGCCGCC TTTGCGCAGCTTCAC RPA1184 1296628 - 1295696 - | hypothetical protein RPA1185 1297731 - 1296628 - | ATPase TERM 979 1297652 - 1297670 + g 76 -8.8 -4.17048 | TCTCTCCTGTCCACA CCGGCC GCCGCCG GGCCGG TTGTTTTCACCGGGA TERM 980 1297950 - 1297898 - g 82 -16.2 -3.33162 | gap 1, opp_overlap 1297949, overlap 1297899 GAGTTCACCGCACAA TCTCGACGGC-CTCACCGAGGCCGC GCGG GAGGCCGCGGCGAGCGCCGCCAAGG GCAAGGGCTTGCCGC TERM 981 1297949 - 1297899 - g 93 -19.7 -2.59683 | gap 1, overlap 1297898 AGTTCACCGCACAAT CTCGACGGC-CTCACCGAGGCCGC GCGG GAGGCCGCGGCGAGCGCCGCCAAG GGCAAGGGCTTGCCG RPA1186 1297866 - 1298477 + | hypothetical protein RPA1187 1298486 - 1299151 + | NUDIX hydrolase RPA1188 1299408 - 1300664 + | polynucleotide adenylyltransferase region TERM 982 1300767 - 1300736 - T 82 -10.8 -4.07568 | opp_overlap 1300738 1300750, overlap 1300738 GGCTCGTCCGGAAAA TACGCGACCGCG TGCTGATC CGCGGCCGCGTC AGTTGTGGCGAAGAC TERM 983 1300765 - 1300738 - T 81 -13.4 -3.63744 | opp_overlap 1300738 1300750, overlap 1300736 CTCGTCCGGAAAATA CGCGACCGCG TGCTGATC CGCGGCCGCG TCAGTTGTGGCGAAG RPA1189 1301021 - 1300794 - | hypothetical protein RPA1190 1301731 - 1301099 - | hypothetical protein TERM 984 1301242 - 1301225 - G 72 -6.9 -4.18018 | overlap 1301226 CGGTTGCAGCGAAAA CCGCTCG AACT CGAGCGC CGCAAACTCTTCCGG RPA1191 1302197 - 1301742 - | putative RNA methyltransferase RPA1192 1302375 - 1303001 + | cytochrome b6-F complex iron-sulfur subunit RPA1193 1303042 - 1305108 + | cytochrome c1 TERM 985 1305135 - 1305162 + F 77 -12.8 -3.551 | opp_overlap 1305142, overlap 1305142 ACCAACACAACGAGA CAGGAAAGCCCC TTCG GGGGCTTTTTTG TTGTCTGCATTCCGG TERM 986 1305155 - 1305142 - f 74 -9.5 -3.91027 | opp_overlap 1305135 1305142 CAACGAGACAGGAAA GCCCC TTCG GGGGC TTTTTTGTTGTCTGC TERM 987 1305142 - 1305155 + F 100 -9.5 -5.60689 | opp_overlap 1305142, overlap 1305135 CAACGAGACAGGAAA GCCCC TTCG GGGGC TTTTTTGTTGTCTGC RPA1194 1305267 - 1305941 + | carboxymethylenebutenolidase TERM 988 1306319 - 1306361 + T 100 -17.3 -4.0896 | gap 2, overlap 1306319 1306320 CCGATGCGATCGTCT G--CAACGCCCCGTTTCCGAT GCG ATCGGAAATGGGGCGTTGGTC TTTTCGGGGGCATTT TERM 989 1306319 - 1306359 + T 100 -23.5 -3.63922 | overlap 1306319 1306320 CCGATGCGATCGTCT GCAACGCCCCGTTTCCGAT GCG ATCGGAAATGGGGCGTTGG TCTTTTCGGGGGCAT TERM 990 1306320 - 1306358 + T 100 -27 -2.78032 | overlap 1306319 1306319 CGATGCGATCGTCTG CAACGCCCCGTTTCCGAT GCG ATCGGAAATGGGGCGTTG GTCTTTTCGGGGGCA fixR1 1307200 - 1306424 - | short-chain dehydrogenase pdxH 1307835 - 1307197 - | pyridoxamine 5'-phosphate oxidase RPA1197 1307959 - 1308369 + | hypothetical protein RPA1198 1308489 - 1309457 + | putative heat shock protein DnaJ TERM 991 1309536 - 1309485 - f 71 -12.8 -3.07994 | gap 1, opp_overlap 1309488, overlap 1309488 CGGAATTTGACGCAA GTAGCGGCCTCGGTGCGGGGGATCA GCG CGCAACCCCGC-CCGAGGCCGCTTG CGTCGATCGGCGGAT TERM 992 1309488 - 1309533 + F 90 -18.4 -3.07816 | gap 1, opp_overlap 1309485 1309488 AATTTGACGCAAGTA GCGGCCTCGGTGCGGGG GATCAGCGCGCAA CCCCGC-CCGAGGCCGC TTGCGTCGATCGGCG TERM 993 1309533 - 1309488 - f 87 -18.9 -2.7556 | gap 1, opp_overlap 1309488, overlap 1309485 AATTTGACGCAAGTA GCGGCCTCGGTGCGGGGGATCA GCG CGCAACCCCGC-CCGAGGCCGC TTGCGTCGATCGGCG RPA1199 1309856 - 1310677 + | enoyl-(acyl carrier protein) reductase RPA1200 1310785 - 1311378 + | phosphoglycerate mutase aroC 1311494 - 1312582 + | chorismate synthase RPA1202 1312686 - 1313885 + | putative adenylate/guanylate cyclase clpS 1314374 - 1314063 - | ATP-dependent Clp protease adaptor TERM 994 1315076 - 1315064 - g 80 -9.1 -4.25104 | GCTGTTCGAGCAAAA CCCGT ATC ACGGG CTGCGCCGGGTGATC RPA1204 1314621 - 1315457 + | hypothetical protein RPA1205 1316733 - 1315582 - | putative alcohol dehydrogenase TERM 995 1316845 - 1316871 + r 86 -16.6 -3.13403 | opp_overlap 1316836, overlap 1316844 GCAATACCCTGCTGT CCGGACGGCG CAGGAAA CGCCGTCCGG TATTGCTGCGAGCGA RPA1206 1318442 - 1316922 - | aldehyde dehydrogenase TERM 996 1317622 - 1317644 + g 70 -10.6 -3.53761 | opp_overlap 1317636, overlap 1317604 TCTTCGGCCGTGACG TCGCCGAAGA AGA TGTTCGGCGA TTTGCCGCCGAGTTC TERM 997 1319117 - 1319078 - g 76 -15.1 -3.16191 | gap 1 CGACACCGGCACCAA TGCGATCGGCACGGCGCT GGTCG AGCGCCA-GCCGATTGCA GTGCACGGCGCCGAG RPA1207 1318680 - 1320569 + | sigma-54-dependent transcriptional regulator RPA1208 1322013 - 1320610 - | carotenoid oxygenase TERM 998 1321456 - 1321474 + g 71 -12.4 -3.28712 | GAACGACATCGTACG CGTCAGCG GGC CGCTGGCG TTGTAGCCGAAGAAC RPA1209 1323434 - 1322055 - | hypothetical protein TERM 999 1322393 - 1322379 - G 72 -11.4 -3.53224 | GATCTCGTTGGCAAA GCGCTG CAC CAGCGC GTCGTCGATCGAGCC RPA1210 1324536 - 1323427 - | hypothetical protein RPA1211 1325616 - 1324555 - | hypothetical protein TERM 1000 1324807 - 1324795 - G 77 -10.5 -3.9461 | overlap 1324796 GCCGCCGAAGAACAA CGCCG GCA CGGCG CGGCGGAAGGTGACG TERM 1001 1324828 - 1324843 + g 75 -6.8 -4.30576 | gap 1, opp_overlap 1324796, overlap 1324826 GAAGGTGACGGTCCA GC-GCGC GCC GCGCAGC TTTTCGTAATACGCC RPA1212 1326776 - 1325781 - | Alpha/beta hydrolase fold TERM 1002 1326923 - 1326895 - R 73 -11 -3.64198 | TTCGCATACATAGAA GCGCGCGCACGA TCGAC TCGTACACACGC ATGATAGTCCAGTGA RPA1213 1328503 - 1326998 - | hypothetical protein RPA1214 1330291 - 1328639 - | putative ABC transporter ATP-binding protein TERM 1003 1328770 - 1328791 + g 75 -4.3 -4.65895 | overlap 1328764 GCACTTCGGCGGCGG GGCCCTGTT CGAC GACGCGGCC TTTTTCCATCACCGC RPA1215 1331290 - 1330400 - | putative ABC transporter, permease protein TERM 1004 1331257 - 1331226 - G 74 -10 -3.81951 | gap 1, overlap 1331230 GTCGACAGCAGGAAA CCGA-GCCGCGGACG CAT CGGGCGCGGCACCGG AAGGGTCGGTTCGGA RPA1216 1332245 - 1331304 - | putative ABC transporter, permease protein TERM 1005 1331539 - 1331575 + g 79 -10.8 -3.95852 | opp_overlap 1331508 1331501 GTGATTACCGGGACC GCCGCATTGC-GCAGCGC GTG GCGCAGCAGC-ACGCGGC TTTCGTTGATGCCCT RPA1217 1333540 - 1332410 - | carboxypeptidase RPA1218 1333792 - 1335405 + | putative ABC transporter periplasmic protein TERM 1006 1335479 - 1335437 - T 81 -14 -3.54741 | opp_overlap 1335444, overlap 1335440 CATCATTCGTCGAAA CATCATCGCGCCGTCCTGCC TCC AGCAGGGCGGCGCTTTGCTG TGCGGAGCTTGCGCC TERM 1007 1335476 - 1335440 - T 74 -14.3 -2.60813 | opp_overlap 1335444, overlap 1335437 CATTCGTCGAAACAT CATCGCGCCGTCCTGCC TCC AGCAGGGCGGCGCTTTG CTGTGCGGAGCTTGC TERM 1008 1335444 - 1335472 + T 100 -19.6 -3.83026 | opp_overlap 1335440 1335437 CGTCGAAACATCATC GCGCCGTCCTGC CTCCA GCAGGGCGGCGC TTTGCTGTGCGGAGC TERM 1009 1335897 - 1335879 - T 100 -13.1 -5.06414 | opp_overlap 1335875 1335879 TCCGCCCAACAAAAA GCCCGGC GCGAA GCCGGGC TCGATTGGCTGGGTG RPA1219 1336595 - 1335945 - | hypothetical protein RPA1220 1337065 - 1338081 + | CBS domain-containing protein RPA1221 1338923 - 1338132 - | hypothetical protein TERM 1010 1338240 - 1338225 - G 86 -9 -4.57569 | CCAGCCGTCGAAAAA CACCAC GATG GTGGTG ATCAGTCCGGTGATC RPA1222 1339974 - 1338952 - | hypothetical protein TERM 1011 1338985 - 1339006 + g 70 -11.5 -3.40191 | ATCCTCTGCAAGCTT GGCGGCTGC CTTG GCGGCTGCC TTCATCTGTTGTCGG TERM 1012 1339328 - 1339381 + g 70 -10.9 -3.54741 | gap 1, opp_overlap 1339358, overlap 1339324 TTGAGCTTGCGGGCG CGGCGGGCCAGCACCTGTTGGCCG AACTCAG CGGCCGACGGGCGTTC-CGCGCCG TTTGCGCCCCTGGTC RPA1223 1340314 - 1339991 - | hypothetical protein TERM 1013 1340250 - 1340282 + g 71 -12.6 -3.34233 | overlap 1340242 TGTTTGTCCGGCCCG CGCTCCGGCGCCGG TTTGC TCGGAGCCGGGGTG TTCTGGACGTTGTCC iorA 1340580 - 1342406 + | putative indolepyruvate ferredoxin oxidoreductase, alpha subunit RPA1225 1342448 - 1343347 + | pyruvate ferredoxin/flavodoxin oxidoreductase 4Fe-4S binding subunit TERM 1014 1344360 - 1344342 - g 74 -2.3 -4.7373 | overlap 1344344 CGAGGCGACCAAAAA CGCCAAG GCGAT CCTGGTG CCCGAACTCAACATA RPA1226 1343344 - 1344507 + | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha TERM 1015 1345332 - 1345282 - g 71 -9.5 -3.78934 | gap 2, overlap 1345279 1345294 TCTGGCTCAGAACAA CCGGC-CGGAATACGGC-GCGGCCC TGC GCGCCGCTGCCGCCGCACGCGCCGG CAAGTGACGGGGAGA oorB 1344509 - 1345339 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta RPA1228 1345354 - 1345914 + | pyruvate ferredoxin/flavodoxin oxidoreductase RPA1229 1345938 - 1347272 + | phenylacetate--CoA ligase TERM 1016 1347315 - 1347364 + F 83 -15.4 -3.1364 | gap 2, opp_overlap 1347320 1347324, overlap 1347320 1347320 1347322 CTTTGCGATGCAGCA TAAAAG-TA-ATCGACACGCGCCT TGAC AGGCGCGTGTCGATCTAACTTTAA TTAACTGATTGAGTA TERM 1017 1347358 - 1347320 - f 100 -15.5 -4.4767 | gap 1, opp_overlap 1347315 1347320 1347320 1347322, overlap 1347324 CGATGCAGCATAAAA GTA-ATCGACACGCGCCT TGAC AGGCGCGTGTCGATCTAA CTTTAATTAACTGAT TERM 1018 1347320 - 1347359 + F 91 -15.3 -3.94404 | gap 2, opp_overlap 1347320 1347324, overlap 1347315 1347320 1347322 CGATGCAGCATAAAA G-TA-ATCGACACGCGCCT TGAC AGGCGCGTGTCGATCTAAC TTTAATTAACTGATT TERM 1019 1347320 - 1347358 + F 79 -15.5 -2.95919 | gap 1, opp_overlap 1347320 1347324, overlap 1347320 1347315 1347322 CGATGCAGCATAAAA GTA-ATCGACACGCGCCT TGAC AGGCGCGTGTCGATCTAA CTTTAATTAACTGAT TERM 1020 1347322 - 1347355 + F 90 -19.7 -2.71246 | opp_overlap 1347320 1347324, overlap 1347320 1347320 1347315 ATGCAGCATAAAAGT AATCGACACGCGCCT TGAC AGGCGCGTGTCGATC TAACTTTAATTAACT TERM 1021 1347353 - 1347324 - f 100 -22.3 -3.77302 | opp_overlap 1347322 1347320 1347320 1347315, overlap 1347320 GCAGCATAAAAGTAA TCGACACGCGCCT TGAC AGGCGCGTGTCGA TCTAACTTTAATTAA RPA1230 1347482 - 1348354 + | putative ABC transporter, permease protein RPA1231 1348357 - 1349502 + | ABC transporter permease RPA1232 1349499 - 1350260 + | putative branched-chain amino acid transport system ATP-binding protein RPA1233 1350264 - 1351013 + | putative branched-chain amino acid transport system ATP-binding protein TERM 1022 1351032 - 1351072 + G 70 -13.2 -3.05844 | opp_overlap 1351019, overlap 1351066 1351067 GACCACGCTGGCGGG CCGCGTCATCGCGGCGCT ACGCC AGCACGGCGATGCCGTGG TGTTGCGCTGGAAGC RPA1234 1350997 - 1352697 + | long-chain-fatty-acid--CoA ligase TERM 1023 1353516 - 1353498 - g 72 -8.8 -4.07885 | opp_overlap 1353498 CACGGCGGCGCAAAA GCTCGGCT GGA AGCCGACC TTCGTGGTGTCATCG RPA1235 1352737 - 1353942 + | leucine-binding protein (LBP) TERM 1024 1353969 - 1353989 + T 100 -14 -5.27335 | opp_overlap 1353969 TGTCTCAAGCGCAAA TGCCCGGC CTCGC GCCGGGCA TTTTTCTTTCGAAGG TERM 1025 1353989 - 1353969 - T 81 -14 -3.66178 | opp_overlap 1353969 TGTCTCAAGCGCAAA TGCCCGGC CTCGC GCCGGGCA TTTTTCTTTCGAAGG TERM 1026 1354025 - 1354056 + T 82 -10.9 -4.015 | gap 1 TTTCAACTCTCAATT CGT-CATGGCCGGG CTCGT CCCGGCCATCCACG TTCTTTCATGCGTCC RPA1236 1355329 - 1354133 - | putative acyl-CoA dehydrogenase RPA1237 1356484 - 1355348 - | acyl-CoA dehydrogenase TERM 1027 1355633 - 1355689 + g 76 -8.6 -4.17491 | overlap 1355636 1355636 GTCGACCTGCACCGA CATGTCGGTCAGCCGAT-GCCGCACCAC CTG GTTG-GCGGCGAGCGGCCGGCCGAACTG TTTTCGAACTTTGGT TERM 1028 1356029 - 1356055 + g 70 -10.8 -3.5393 | overlap 1356031 CACCGCAACTTTGGC GCCGTCGATCAC ATA GTGATCGCCGTC TTTGCGCGCGGTGGT RPA1238 1357336 - 1356488 - | enoyl-CoA hydratase TERM 1029 1358276 - 1358332 + G 74 -15.8 -2.63301 | TGGTGGCACCGGGCA TCGCCG-AGGCGCTGCTGGCGACCGCGC TCG GCCTGGTCGCC-GCGGTGCCGGCGGTGG TGATCTACAACTATC exbB1 1357474 - 1358460 + | putative biopolymer transport protein ExbB exbD1 1358465 - 1358902 + | biopolymer transport protein ExbD TERM 1030 1359738 - 1359756 + G 70 -6.6 -4.1899 | CCAATCGTCGCTCAG CTTCACCG TGC CGGTGCGG TTTTCGCTGCAGTGA RPA1241 1358899 - 1359771 + | tonB transport protein TERM 1031 1359776 - 1359808 + T 75 -14 -3.10344 | CGCTGCAGTGAGTGA GCGCGCAGGCCGGC GTCAG GCCTGCCCGTGCGC TGTCTTCACTGCGGC fadD1 1361302 - 1359791 - | AMP-dependent synthetase and ligase TERM 1032 1361494 - 1361478 - H 70 -7.9 -4.07885 | CAGGGCGGCCGAAAA TCCGCCG AAA CGTCGGA GGTCAGTCGAATTTT RPA1243 1361637 - 1362803 + | late embryogenesis abundant protein RPA1244 1362819 - 1363424 + | hypothetical protein RPA1245 1363411 - 1363803 + | hypothetical protein RPA1246 1363800 - 1364501 + | hypothetical protein rbn2 1364565 - 1365647 + | ribonuclease BN RPA1248 1366570 - 1365644 - | two-component LuxR family transcriptional regulator RPA1249 1369928 - 1366560 - | sensor histidine kinase TERM 1033 1367156 - 1367106 - G 78 -14.7 -3.23692 | GACCAGCACGATGAA GCCGAGC-GGCGCCAGCGCATCCTG CAG CAGGCCGCGCTG-CGCCGGATCGTC GTCAGTCACCAGGAT TERM 1034 1367883 - 1367936 + g 70 -8.7 -3.9122 | CGGCGAGCGCAGCTC GTGGCTGAGGCCGACGACGTAGC GGCTCTTG GCGAGGTTGGCGGACTCGGCCGC TTCTTTGGCGCGCTG TERM 1035 1369969 - 1369984 + H 76 -8.2 -4.13767 | opp_overlap 1369958 ACTAGCGCCGATCCG CCGGCG ACGT TGCCGG TTTTGCCGTCACGGC RPA1250 1370185 - 1371447 + | amide-urea binding protein TERM 1036 1371643 - 1371685 + G 72 -6.8 -4.24204 | overlap 1371649 TTCGATTGGTGATCT CGGGGCGATCTTCGCGATGC AGG GCTTCGCGGGGCTCATTCTG TTTTCCGTCTACGTG RPA1251 1371614 - 1372540 + | putative branched-chain amino acid transport system permease protein RPA1252 1372555 - 1373706 + | putative high-affinity branched-chain amino acid transport system permease protein RPA1253 1373717 - 1374472 + | branched-chain amino acid transport system ATP-binding protein RPA1254 1374483 - 1375172 + | putative ATP-binding component of ABC transporter fmdA 1375209 - 1376438 + | formamide amidohydrolase TERM 1037 1376866 - 1376849 - g 72 -6.9 -4.1891 | opp_overlap 1376865, overlap 1376857 GTCGGCGAATACAAA GCCAAGC ATGC GCCCGGC TGCAGCTGCTGTTCG fmdB 1376627 - 1376971 + | putative formamidase regulatory protein FmdB cobS 1377883 - 1377086 - | cobalamin (5`-phosphate) synthase RPA1258 1378063 - 1378485 + | hypothetical protein TERM 1038 1378688 - 1378710 + F 70 -7.6 -4.03234 | TCTCTTCGAGGGAGG CGTTCCGGCT CCG GGCCGCAGCG TTTCTGTCGAGCCGA TERM 1039 1378792 - 1378775 - g 71 -9.1 -3.84712 | overlap 1378786 CAAGCCGACATCAAA GGCCCGA ACGA TCAGGCC TCCGACGAGATGTGG TERM 1040 1381261 - 1381298 + G 82 -15.5 -3.45023 | gap 1, opp_overlap 1381248 CAGCTCGATCTCGCT GCGCGGCGCGC-TCGGCA CCA TGCCGGTGCTGGCCGCGC TTGTCGTGGTGATCG RPA1259 1378745 - 1381489 + | putative cation-transporting P-type ATPase RPA1260 1381578 - 1382483 + | universal stress protein TERM 1041 1382661 - 1382636 - g 72 -14.7 -2.78547 | opp_overlap 1382636, overlap 1382633 CGAGGGGATGAACGA GGCCGAGCAGG CCTT CGTGCTCGGCC GCTACAAGGCGAAGT RPA1261 1382580 - 1384175 + | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal RPA1262 1384611 - 1384147 - | hypothetical protein RPA1263 1384843 - 1385118 + | hypothetical protein TERM 1042 1385146 - 1385186 + F 84 -11.2 -4.14615 | gap 2, opp_overlap 1385154 CAGGTTTTGACGATT TGACGAAAGCCGGC--CCCG TTT CGGGAAGCCGGCTTTCAGCA TTTTCAAGGGTTTTT TERM 1043 1385178 - 1385154 - f 74 -10 -3.75169 | gap 2, opp_overlap 1385146 GACGATTTGACGAAA GCCGGC--CCCG TTT CGGGAAGCCGGC TTTCAGCATTTTCAA TERM 1044 1386204 - 1386182 - g 75 -12 -3.63073 | CAGACCCGCGAAGAA TCCGCCGC GACTTCG GCGGCGGA CGGCCAGGTCACCGT TERM 1045 1386748 - 1386719 - g 77 -16.3 -2.70932 | CCGGCGCCGGAAGCA GCCGGCGGCCTGC CGGC GCTGGCCGACGGC ACCGTGCCGCAGATC fliF 1385318 - 1386934 + | flagellar MS-ring protein fliG 1386941 - 1388029 + | flagellar motor switch protein G TERM 1046 1388355 - 1388329 - g 90 -18.1 -3.53012 | GCCGCGGCGCGCAAA CTCTGCGGCGA ACTGG TCGCCGCAGAG CCGCTGGCCGAGATC fliH 1388029 - 1388655 + | flagellar assembly protein H TERM 1047 1388893 - 1388920 + G 77 -15.6 -3.05022 | GCGCAGTGCTGGAGC TCGATCGCCGCG TCGG CGAGGCGATCGA TATCTATGTGAACAA fliY 1388673 - 1389020 + | flagellar motor switch protein TERM 1048 1389045 - 1389029 - f 76 -10.8 -3.72363 | overlap 1389022 CACCTAAACGCGAAA CGCGCG GGACT CGCGCG GCAGGAGATCTAGGA flbD 1389068 - 1390447 + | two component, sigma54 specific, transcriptional regulator, Fis family TERM 1049 1390504 - 1390551 + T 100 -25 -3.01712 | gap 1 GGCCCCCTCTGGAAG GTCTCTCCTCCGCCCCTCCTCCT GAA AGGAGGTGGGGCGGAG-AGGGGC TATTAGGCAGCAAAG RPA1269 1390966 - 1390811 - | hypothetical protein RPA1270 1391299 - 1391021 - | hypothetical protein RPA1271 1391768 - 1391337 - | hypothetical protein RPA1272 1391835 - 1392662 + | transglutaminase-like domain-containing protein TERM 1050 1392702 - 1392728 + F 89 -13 -4.10672 | opp_overlap 1392701, overlap 1392691 1392703 GCCGTCGGCACCAAG CCCGGTTCCGAT TCA ATCGGAGCCGGA TTTGCTTTAGCTTGC TERM 1051 1392703 - 1392727 + F 84 -16.5 -3.0568 | opp_overlap 1392701, overlap 1392691 1392702 CCGTCGGCACCAAGC CCGGTTCCGAT TCA ATCGGAGCCGG ATTTGCTTTAGCTTG TERM 1052 1392874 - 1392833 - g 70 -10.7 -3.54741 | opp_overlap 1392861 GACGAGGCGCTGAAA GCCGTCGGCGCCTGGCTCA AGGC CAAGCCCGGCCGCAACGGC ACGCCGCTGGTGTTC TERM 1053 1393222 - 1393246 + G 77 -12.1 -3.62597 | CGGCGATCCTGCGCA GCTGCCGCC AATCCAG GGCGGCGGC TTCTTCACCAATGCC RPA1273 1392794 - 1393903 + | deoxyribonuclease RPA1274 1394619 - 1395500 + | Dps protein family starvation-inducible DNA-binding protein RPA1275 1396287 - 1395763 - | hypothetical protein TERM 1054 1396486 - 1396442 - R 76 -10.8 -3.73775 | GTGACTGTGACCAAA TCG-GATTCCGGGTTCGCGAGC TAG GCTCGCGC-CCCGGAATGACAA GTTGAGAAGATGATA TERM 1055 1396510 - 1396531 + r 100 -14.4 -4.15222 | GATGATATGTGTAAG GCCGCCGC AACTAC GCGGCGGC TTTCTTCGCGCGCAT carA 1397713 - 1396520 - | carbamoyl phosphate synthase small subunit TERM 1056 1398306 - 1398320 + G 71 -9.2 -3.85698 | overlap 1398307 GAGATGGGTGATGAC GTCGGC GCT GCCGGC TTTGTCCGCCAGCAG RPA1277 1397862 - 1398566 + | beta-ketoadipate enol-lactone hydrolase RPA1278 1398724 - 1399179 + | hypothetical protein RPA1279 1399575 - 1399267 - | hypothetical protein TERM 1057 1399348 - 1399317 - G 78 -15.9 -3.15366 | GCGAAAACTGCAAGA TTCCGGGATCGCG GTCGCT CGCGAACCCGGAA TGACTGATCAAACTC RPA1280 1399766 - 1400614 + | hypothetical protein RPA1281 1401201 - 1400728 - | hypothetical protein RPA1282 1401508 - 1401194 - | ArsR family transcriptional regulator TERM 1058 1401948 - 1401966 + G 75 -11.6 -3.71848 | GACCGATCAGCCGCC GCCTCCGC CGC GCGGCGGC TTCTTCCTGCAGGGC RPA1283 1401637 - 1402254 + | homoserine/homoserine lactone/threonine efflux protein RPA1284 1403175 - 1402378 - | N-formylglutamate amidohydrolase RPA1285 1403337 - 1403744 + | hypothetical protein RPA1286 1404003 - 1403761 - | hypothetical protein dnaG 1404459 - 1406468 + | DNA primase TERM 1059 1406624 - 1406647 + F 86 -13.1 -3.96531 | overlap 1406643 GAGCGGGATCGTGCG GGGTGGCGC AGGCGG GCGCCGCCC TTTGTGCGTCTCTCC TERM 1060 1407440 - 1407391 - g 90 -18.6 -3.14344 | gap 3, opp_overlap 1407429 GAGCCCGGTGAGGAA GCCG-CGGC-CGAAG-GCGAGGGCG GTG CGCCCGCGCACGTCGCGCCGCCGGC GGCTCCGCCGTCCGC rpoD 1406728 - 1408824 + | RNA polymerase sigma factor RpoD TERM 1061 1408834 - 1408865 + F 86 -15.2 -3.56092 | gap 1, opp_overlap 1408830 1408825 AACTAACGAGAGTGA GGTGGGCACATGCGC GAA GCGCCT-TGCCCACC TTTCACGCCTGATGA RPA1289 1408843 - 1409175 + | hypothetical protein TERM 1062 1409229 - 1409241 + T 74 -4.7 -4.64676 | overlap 1409200 1409230 CGCTTGCCGACCTGA ACCGC TTT GCGGC TTTTCTTCAGGATCA RPA1290 1409895 - 1409572 - | plasmid maintenance system antidote protein RPA1291 1410195 - 1409905 - | putative proteic killer suppression protein RPA1292 1410664 - 1410470 - | hypothetical protein RPA1293 1411431 - 1410628 - | putative IS5 transposase TERM 1063 1410775 - 1410801 + gH 80 -14.5 -3.14647 | overlap 1410771 ATAGACCGCCTTCTC GTCGCCGAGGA CGAGA TCTTCGGCGAC TTCGCTCTCATACGT RPA1294 1411896 - 1413359 + | hypothetical protein RPA1295 1413532 - 1414743 + | putative signal transduction histidine kinase RPA1296 1414958 - 1416721 + | diguanylate cyclase RPA1297 1417764 - 1416913 - | Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase RPA1298 1419070 - 1417955 - | 3-oxoacyl-(acyl carrier protein) synthase III RPA1299 1419368 - 1419715 + | hypothetical protein TERM 1064 1420616 - 1420639 + G 70 -11 -3.59979 | TGGGTCACGCAGAGG TCCAACGACC TAGG GGTCGATGGA TTTGCACTCCACCCG RPA1300 1419941 - 1420894 + | restriction system protein pfpI 1421072 - 1421635 + | intracellular protease TERM 1065 1421668 - 1421650 - T 76 -13.1 -3.53091 | opp_overlap 1421650 ATCCGCTGGGCGAAA CGGCGGC GCTCA GCCGCCG TTTCGCCATGGTGAT TERM 1066 1421650 - 1421668 + T 77 -13.1 -3.58522 | opp_overlap 1421650 ATCCGCTGGGCGAAA CGGCGGC GCTCA GCCGCCG TTTCGCCATGGTGAT TERM 1067 1421742 - 1421707 - T 73 -12.6 -3.23274 | gap 1, opp_overlap 1421713, overlap 1421710 1421713 GTTCCGATAAGCGAA CAACGACCGCGCCGGTG GCT CATCGGCGCGGTT-TTG ATGCGAGAGGAGCCG TERM 1068 1421740 - 1421710 - T 76 -11 -3.75766 | opp_overlap 1421713, overlap 1421707 1421713 CCGATAAGCGAACAA CGACCGCGCCGGTG GCT CATCGGCGCGGTTT TGATGCGAGAGGAGC TERM 1069 1421713 - 1421737 + T 100 -19.3 -4.25104 | opp_overlap 1421710 1421707 1421713 ATAAGCGAACAACGA CCGCGCCGGTG GCT CATCGGCGCGG TTTTGATGCGAGAGG TERM 1070 1421737 - 1421713 - T 87 -17.1 -2.96731 | opp_overlap 1421713, overlap 1421710 1421707 ATAAGCGAACAACGA CCGCGCCGGTG GCT CATCGGCGCGG TTTTGATGCGAGAGG RPA1302 1422200 - 1421829 - | hypothetical protein RPA1303 1422427 - 1423245 + | lytic murein transglycosylase TERM 1071 1423266 - 1423246 - T 83 -15.4 -3.22298 | opp_overlap 1423254 1423254, overlap 1423208 CTGATCGAGCAGTAA GCGCCCGG CTAAT CCGGGCGC GCGGCACCGTCACAT TERM 1072 1423254 - 1423312 + T 74 -10.2 -3.78778 | gap 1, opp_overlap 1423246, overlap 1423254 1423270 GCAGTAAGCGCCCGG -CTAATCCGGGCGCGCGGCACCGTCAC ATCGAG GTGGCGGTGCTGTTGGCCCGGACCAGC TTGTTGATCTGGTCG TERM 1073 1423254 - 1423311 + T 83 -16.2 -2.86785 | opp_overlap 1423246, overlap 1423254 1423270 GCAGTAAGCGCCCGG CTAATCCGGGCGCGCGGCACCGTCAC ATCGAG GTGGCGGTGCTGTTGGCCCGGACCAG CTTGTTGATCTGGTC TERM 1074 1423270 - 1423295 + T 71 -12.6 -3.01712 | overlap 1423254 1423254 TAATCCGGGCGCGCG GCACCGTCAC ATCGAG GTGGCGGTGC TGTTGGCCCGGACCA RPA1304 1423989 - 1423276 - | flagellar hook capping protein RPA1305 1425594 - 1424002 - | flagellar hook-length control protein TERM 1075 1424748 - 1424768 + g 70 -11.8 -3.44229 | CGGTTGCCGCCTGAG CGGCCGCG GCTTG CGCGGTCG TTGTGGTGGTGGCCT TERM 1076 1425718 - 1425736 + H 76 -13.2 -3.53012 | GCTTTGCCACGCTAT TTCTGCCG CTG CGGCAGAA TTTGCCGCGGCCGCG trmU 1425895 - 1427100 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase RPA1307 1427120 - 1427758 + | phosphatidylethanolamine N-methyltransferase TERM 1077 1427775 - 1427793 + T 82 -14.6 -3.2963 | CTCGTGCCGCCGGAA CGTGGCGA GCC TCGCCACG TTGTCCGGGCATGAT RPA1308 1428691 - 1428428 - | hypothetical protein TERM 1078 1429868 - 1429838 - g 79 -3.1 -5.07567 | overlap 1429839 1429864 CGACATCCCAAAAAA GGCCGCAGCCTTC TTCGC GAAGGAAGCGACA TGAAGTTCGTCTTCA RPA1309 1429578 - 1429871 + | transposase RPA1310 1430328 - 1431443 + | putative NADH:flavin oxidoreductase TERM 1079 1431762 - 1431750 - g 77 -6.9 -4.56914 | opp_overlap 1431753 1431754, overlap 1431752 CCACCGAAATGAAAA GCCCC CGC GAGGC TGCTCGCGCATTTAC RPA1311 1431728 - 1432060 + | 4-carboxymuconolactone decarboxylase RPA1312 1432289 - 1432831 + | hypothetical protein TERM 1080 1433032 - 1433079 + F 72 -12.1 -3.31461 | gap 3, overlap 1433032 CCCATGGGCGACTGC T-GGCCGTTCCCGGGCCGCGGGCA GTT TGCTGGCG-C-CGGGAGCGGCCCA TTCTAACGCTCGCTC TERM 1081 1433032 - 1433078 + F 71 -13.7 -2.58663 | gap 2, overlap 1433032 CCCATGGGCGACTGC TGGCCGTTCCCGGGCCGCGGGCA GTT TGCTGGCG-C-CGGGAGCGGCCC ATTCTAACGCTCGCT TERM 1082 1434596 - 1434618 + G 70 -10.5 -3.75115 | overlap 1434594 GTCGAATGCCAACCG CGCTGCCGA GGTCG TCGGCCGCG TTCGTTTTCTCGCCC RPA1313 1433238 - 1435136 + | sensor histidine kinase RPA1314 1435192 - 1435623 + | response regulator receiver (CheY-like protein) RPA1315 1435620 - 1436306 + | two-component LuxR family transcriptional regulator RPA1316 1436669 - 1436415 - | hypothetical protein TERM 1083 1436738 - 1436773 + H 72 -14 -2.78463 | gap 1, opp_overlap 1436728, overlap 1436739 ACAAGGATTGGGGCA GCGGCCAGCCG-GTC GTTTTCA GTCACGGCTGGCCGC TGTCATCGGACGCGT TERM 1084 1437955 - 1437972 + G 73 -14.1 -3.14132 | GCGGCGTTCTGCCAG GGCGCCG TCCT CGGCGCC TTCGTCGGGCGCAGC cioB 1437556 - 1438581 + | putative cytochrome bd-I oxidase subunit II TERM 1085 1438641 - 1438598 - f 100 -21.2 -3.57144 | opp_overlap 1438603 GTCGCGATGGCCAAA TTGAATGTCCGGCGCTTTGC TTCG GCGAAGCGCCGGACATTGAA TTCAAATCAGTTCGC TERM 1086 1438603 - 1438636 + F 100 -23.3 -3.18274 | opp_overlap 1438598 GATGGCCAAATTGAA TGTCCGGCGCTTTGC TTCG GCGAAGCGCCGGACA TTGAATTCAAATCAG RPA1320 1438689 - 1438997 + | hypothetical protein RPA1321 1439181 - 1440020 + | AraC family transcriptional regulator TERM 1087 1440613 - 1440587 - g 77 -13 -3.53012 | opp_overlap 1440588, overlap 1440596 CGGTGCCGCCCGAAA CGGCAACGAGCC TTG GCCTCATTGCCG CCGAGGCCGTCGTCA RPA1322 1440217 - 1440915 + | putative signal transduction histidine kinase TERM 1088 1441262 - 1441227 - T 77 -12.6 -3.63515 | gap 1, opp_overlap 1441231, overlap 1441231 CGCTATGCCGAAGAA CGAAGGGAGCGCC-GCA GTG TGCTGGCGCTCCCTTTT GGTTCGATCTGCCGT TERM 1089 1441231 - 1441258 + T 100 -17.8 -4.44548 | gap 1, opp_overlap 1441227 1441231 ATGCCGAAGAACGAA GGGAGCGCC-GCA GTG TGCTGGCGCTCCC TTTTGGTTCGATCTG TERM 1090 1441258 - 1441231 - T 95 -17.8 -3.53712 | gap 1, opp_overlap 1441231, overlap 1441227 ATGCCGAAGAACGAA GGGAGCGCC-GCA GTG TGCTGGCGCTCCC TTTTGGTTCGATCTG RPA1323 1441510 - 1441280 - | hypothetical protein RPA1324 1441783 - 1443834 + | FusB/FusC fusaric acid resistance pump RPA1324a 1443848 - 1444054 + | hypothetical protein TERM 1091 1444461 - 1444488 + G 79 -16.2 -3.05596 | opp_overlap 1444462 GCAGCAGATCTATAC AGCCGCGGCCGC CATG GCGGCTGCGGCC TTGCGTCAGGCGCTC TERM 1092 1444487 - 1444462 - g 82 -17.5 -2.93858 | opp_overlap 1444461 CAGCAGATCTATACA GCCGCGGCCGC CATG GCGGCTGCGGC CTTGCGTCAGGCGCT RPA1325 1444051 - 1444992 + | FusE-MFP/HlyD family membrane fusion protein RPA1326 1446114 - 1445131 - | AraC family transcriptional regulator RPA1327 1446214 - 1447170 + | Ser/Thr protein kinase TERM 1093 1449608 - 1449628 + G 81 -7.5 -4.66833 | overlap 1449612 GCGCCTGCTCACATC GACACGGCG CAG TGCCGTTTC TTTTTCGCGTTGGCG TERM 1094 1449612 - 1449624 + G 86 -6.9 -4.88293 | overlap 1449608 CTGCTCACATCGACA CGGCG CAG TGCCG TTTCTTTTTCGCGTT RPA1328 1447208 - 1451350 + | sensor histidine kinase TERM 1095 1451723 - 1451694 - g 70 -6.4 -4.1822 | overlap 1451714 GGCTACGTCAAGAAA GCCTGC-GCGCTGG TCAA CCA-CGCCGCGGGC CGGCTGCCGGCCTGG fumC 1451481 - 1452938 + | fumarate hydratase RPA1330 1452940 - 1454220 + | hypothetical protein TERM 1096 1455269 - 1455232 - g 82 -15.6 -3.40403 | overlap 1455235 CTCGGTGCACTACAA GCACCG-CGTCGTCGCGC TGGC GCGCGGCGACGACGG-GC GCTGGCTGGTGACGG TERM 1097 1455267 - 1455235 - g 82 -17 -2.86271 | gap 1, overlap 1455232 GGTGCACTACAAGCA CCG-CGTCGTCGCGC TGGC GCGCGGCGACGACGG GCGCTGGCTGGTGAC mqoB 1454615 - 1456108 + | malate:quinone oxidoreductase RPA1332 1456158 - 1457000 + | phage integrase/recombinase TERM 1098 1457036 - 1457003 - f 77 -13.1 -3.55444 | overlap 1457005 1457006 GGTCGACGTCTGAAA TACCTGGGCAGAGCG GACG CGCTCTGCCCAGCCC CTTAGCCGGATTGGG TERM 1099 1457034 - 1457005 - f 93 -17.9 -3.35597 | overlap 1457003 1457006 TCGACGTCTGAAATA CCTGGGCAGAGCG GACG CGCTCTGCCCAGC CCCTTAGCCGGATTG TERM 1100 1457033 - 1457006 - f 100 -21.4 -2.61144 | overlap 1457005 1457003 CGACGTCTGAAATAC CTGGGCAGAGCG GACG CGCTCTGCCCAG CCCCTTAGCCGGATT TERM 1101 1457409 - 1457448 + G 70 -10 -3.72576 | gap 1 CTGCTCTGATCGATG CCGC-AACCGCCGGCGG CAAGACT TCGTCGGCGGTTCGAGG TTTGCTGACCCCGGC RPA1333 1457225 - 1457881 + | hypothetical protein TERM 1102 1458416 - 1458382 - g 79 -4 -4.86731 | opp_overlap 1458381 1458379 CGTCTCGAAAGAAAA GTCGTTCGCCGGTTCG GTC CGCGCCCGCGGAAGAC GTCTTAGTGACAGGC RPA1334 1457878 - 1458423 + | RNA polymerase ECF-type sigma factor, FecI RPA1335 1458444 - 1459430 + | FecR, iron siderophore sensor protein TERM 1103 1460064 - 1460042 - gf 73 -11.2 -3.53811 | overlap 1460056 TGGAGCGGTGCTAAA GCGCCGACGC AAA GCGTGGACGC CGACGGCCGGACTCA TERM 1104 1460563 - 1460584 + GF 71 -10.9 -3.44325 | gap 1, overlap 1460571 1460575 GCCGCGCGGCCAGAC GCTGCTCGCC GCG GGCGAG-AGC TTCATTCTGCGCCCT TERM 1105 1462691 - 1462714 + GF 71 -8.9 -3.96148 | gap 1 GGCGTCGCTTTGCCG GCCT-CGGTC CAGTT GACCGAAGGC TTTGTGCTGCCCGCC TERM 1106 1465031 - 1465060 + GF 70 -10.5 -3.61398 | overlap 1465032 GCGCGATTGGATGCG TCCGGCGGCGGCC GTCT GACCGGCGCCGGC TTCTTCACCGGGCGC TERM 1107 1465032 - 1465059 + GF 72 -14 -2.76696 | overlap 1465031 CGCGATTGGATGCGT CCGGCGGCGGCC GTCT GACCGGCGCCGG CTTCTTCACCGGGCG TERM 1108 1468074 - 1468109 + GF 72 -14.1 -2.70932 | ACGGCAATGTCACCA CCGGCGTGCGCGGC-TC TGGC GATGCCG-GCACGCTGG TCATTCGCGCCGGGG TERM 1109 1469020 - 1469051 + GF 77 -15.8 -2.66451 | opp_overlap 1469020, overlap 1469017 1469016 CTGGCTGCAAGGCAA TGCGTCGCGCGGCG AGGC CGCCGCGTGGGGCA TCAATTTCGGTCAGT TERM 1110 1469481 - 1469508 + G 73 -13.4 -3.33261 | opp_overlap 1469486, overlap 1469486 CCCGCGCGCGCCCGA CACGACGCGGCC GCGT GACCGCGTTGTG TTCTCACCGTTCGGG RPA1336 1459664 - 1469554 + | hypothetical protein TERM 1111 1469915 - 1469937 + GF 100 -17 -3.55071 | CGATGTCCAGCGGGG CGGCGTCGTC GCT GGCGACGCCG TTTCAGCCGCTGTGG RPA1337 1469449 - 1471704 + | hypothetical protein RPA1338 1472806 - 1473558 + | hypothetical protein RPA1339 1473555 - 1474103 + | RNA polymerase ECF-type sigma factor, FecI TERM 1112 1474457 - 1474408 - g 72 -14.1 -3.07816 | gap 1, opp_overlap 1474455 TTGGGACGGATCGAA GCCGCGCCGCGCGCCGTCAACCGC CGG GCGGTCCT-GGCAGGCGCCGCGGC CACGGCGACCGTCGC RPA1340 1474165 - 1475148 + | FecR, iron siderophore sensor protein TERM 1113 1479881 - 1479831 - g 71 -14.7 -2.57564 | opp_overlap 1479871, overlap 1479830 GCAGCCTGCTACAAG GCGACGTCACC-GCGGTGAGCGTGC GCG GCGCGCTCGCCACCGGT-ACGGCGC GGTTCGGCGTCGACC TERM 1114 1481732 - 1481767 + G 77 -11 -3.85698 | gap 1 GGCGAGGTGATCATC GGCAGCGGCCCGCGCTG GTC CAGCGCCGTCGGC-GCC TTTGTCAACGGCAGC TERM 1115 1482139 - 1482112 - g 82 -16.2 -3.29144 | CGATCTCGGCGAGAA GGCCGCCATCGC CGCG GCGGCGGCGGCC GGCCGGCTCCCCGCC TERM 1116 1486745 - 1486689 - g 71 -14.4 -2.90194 | ACTTCTGGAACCAGA CCTAC-TCGCTGTTCGCCTTCGGCCCCG ACA CGGCGGCGACGGCG-ACGGCGACGCAGG GGGCCGCGGCACCGA RPA1341 1475303 - 1488310 + | hypothetical protein RPA1342 1488935 - 1488669 - | hypothetical protein RPA1343 1489054 - 1489806 + | hypothetical protein RPA1344 1489856 - 1490317 + | hypothetical protein TERM 1117 1490338 - 1490318 - f 71 -8.1 -3.82528 | opp_overlap 1490319 AACCTCAAAAAGTAA CTCGCAGGC CCG GCCAGCGGG TGCGTCTGCCGATTG RPA1345 1490469 - 1491218 + | hypothetical protein RPA1346 1491235 - 1491948 + | TonB protein, colicin J receptor TERM 1118 1492328 - 1492307 - g 70 -2.1 -4.66318 | overlap 1492309 AGGATCGGAACAAAA GAGATCGGC ATAT GCTGACCGC CAGCGATGTCGCGGC RPA1347 1492084 - 1492635 + | RNA polymerase ECF-type sigma factor, FecI TERM 1119 1493909 - 1493932 + G 81 -11 -4.14243 | overlap 1493901 TCGGCGCGACGGCCC GCACACTGCC GGGC GGCATTGTGC TTTTGAGCTGAGGTC fecR3 1492975 - 1493943 + | FecR, iron siderophore sensor protein TERM 1120 1494753 - 1494719 - g 79 -10.6 -3.97088 | overlap 1494723 GTCGACAAGATCAAA GAGACCGCACCGTCGC TAC GCGAAGGCACGGTGCC AAATTTCAAGGACGT TERM 1121 1494749 - 1494723 - g 73 -12.2 -3.35191 | overlap 1494719 ACAAGATCAAAGAGA CCGCACCGTCGC TAC GCGAAGGCACGG TGCCAAATTTCAAGG RPA1349 1494203 - 1495957 + | hemolysin activation/secretion protein TERM 1122 1496452 - 1496407 - g 77 -6.8 -4.45738 | gap 1 TACGGCAACAAGAAA GCG-GTCGCGATCGCAGACTC GAAGG GCACCTACGACCCCGACACGC AGCTGGTTTATCACT exbB2 1495957 - 1497984 + | putative transport protein ExbB2 exbD2 1497989 - 1498393 + | transport protein ExbD TERM 1123 1498551 - 1498578 + G 70 -10.6 -3.59979 | gap 1 CGCTGCGCAGCCGAA TGGCAGCGACGGC CTC GCCGT-GCTGGCA TTTCCGGTCCGCGGG TERM 1124 1498627 - 1498665 + G 86 -18.3 -3.12668 | gap 1, opp_overlap 1498615, overlap 1498621 CTAGCCCGGACGCTA CGCGCTCGTTCGCCTGCT GCGG AGCAGGCGAACGACC-CG TTCCGTCTGACGCTA RPA1352 1498390 - 1498887 + | hypothetical protein TERM 1125 1499422 - 1499389 - g 80 -13.8 -3.7108 | opp_overlap 1499387, overlap 1499418 AGTCGCAGATCGAAA GCGCGCTGCGCTCG AACCAG CGGACGCAACGCGC GGTGTTGCAGGTGCA RPA1353 1498884 - 1499624 + | hypothetical protein TERM 1126 1499691 - 1499712 + G 75 -11.5 -3.64703 | AATCCGAACGCACGC CGGCGCGCA TATC TGCTCGCCG TTTCGCTGGCGGCGC TERM 1127 1500347 - 1500326 - g 73 -12.3 -3.39482 | CAACACCACCGAGAA CCGCAACCA GGTG CGGTTGCGG GCGCGGCTTGGCATG RPA1354 1499664 - 1501541 + | hypothetical protein RPA1355 1501544 - 1502137 + | hypothetical protein TERM 1128 1502376 - 1502353 - g 74 -10.2 -3.8647 | opp_overlap 1502374 AGCGACGACACCAAA GACGGGGACG TCAT CGCCCGCGTC GGTAGCACCAACATT RPA1356 1502134 - 1503177 + | PpiC-type peptidyl-prolyl cis-trans isomerase RPA1357 1503219 - 1503734 + | hypothetical protein RPA1358 1503755 - 1504246 + | hypothetical protein RPA1359 1504243 - 1505148 + | transglycosylase RPA1360 1505154 - 1505711 + | hypothetical protein RPA1361 1505994 - 1505812 - | hypothetical protein RPA1362 1506856 - 1507920 + | putative sulfate ester transport system substrate-binding protein TERM 1129 1508512 - 1508531 + G 79 -11.4 -3.86015 | overlap 1508513 TGGGCAGCGTGATCC TGCCGGCA GCGC TGCCGGCG TTTCTCACCGGGCTG RPA1363 1507917 - 1509533 + | sulfate ester transport system permease protein RPA1364 1509530 - 1510339 + | sulfate ester transport system ATP-binding protein RPA1365 1510381 - 1512045 + | putative sulfatase TERM 1130 1512071 - 1512097 + T 79 -11.4 -3.82946 | AGGTCAAGCCCGACC GGCGCCTGGCGC AGC GCGTCCGGAGCC TTCTATTTCACGTCC soxZ1 1512435 - 1512100 - | putative sulfur oxidation protein soxY1 1512902 - 1512432 - | sulfur oxidation protein SoxY RPA1368 1513015 - 1513605 + | hypothetical protein TERM 1131 1513759 - 1513800 + G 73 -9.3 -3.90112 | gap 1, opp_overlap 1513741 1513736 CGCGCGTCTACGACT GCCAGTCCTGGT-CGCGCCG ATG CTGCGCATATCAGGGCCGGC TTTGGTTGCAGCGAG RPA1369 1513712 - 1514713 + | hypothetical protein TERM 1132 1514714 - 1514732 + T 71 -5.9 -4.27886 | overlap 1514715 GATCCCGCCATCTGA GCGGCTC CACAA GAGCCGG TTTATGTGTTTGCCG RPA1370 1516643 - 1515576 - | nitrogen-fixing NifU, C-terminal vnfX 1517132 - 1516647 - | putative vanadium nitrogenase protein TERM 1133 1516960 - 1516990 + g 73 -11 -3.74747 | overlap 1516961 1516985 TTGTCGTGCACCGTG CCGGTGAGGCCGAC GCG GCCGGTCTCGCCGA TTTGCTCGGCCTTCA TERM 1134 1516961 - 1516989 + g 73 -14.5 -2.84527 | overlap 1516960 1516985 TGTCGTGCACCGTGC CGGTGAGGCCGAC GCG GCCGGTCTCGCCG ATTTGCTCGGCCTTC vnfN 1518511 - 1517129 - | putative nitrogenase cofactor synthesis protein TERM 1135 1517591 - 1517550 - G 73 -15.1 -2.9039 | gap 1, overlap 1517538 AGAGCAGCGCATAGA CCCGCATCGGCCGCGATCGC GAC GCGAGCGCCGCCGAT-CTGG AACTGAGTGTCGACC TERM 1136 1517623 - 1517640 + g 76 -8.3 -4.1899 | opp_overlap 1517621, overlap 1517624 TCGCGTCGAGGAACT GCGCGCG CTTG CGCGCGA TTTTAGCTGGCATCG vnfE 1519905 - 1518523 - | putative nitrogenase cofactor synthesis protein vnfA 1520222 - 1521856 + | sigma-54 dependent, vanadium nitrogenase transcriptional regulator, VnfA RPA1375 1521861 - 1522259 + | hypothetical protein TERM 1137 1522328 - 1522369 + T 81 -15.9 -3.06183 | opp_overlap 1522325 1522322 1522333 1522337, overlap 1522333 1522337 GCGAGGAGAGCAGCG ACGAAGCAATCCATGCCGC AGGT GTGGCCTGGGTTGCTTCGC TTCGCTCGCAATGAC TERM 1138 1522333 - 1522364 + T 73 -13 -3.19192 | opp_overlap 1522325 1522322 1522333 1522337, overlap 1522328 1522337 GAGAGCAGCGACGAA GCAATCCATGCCGC AGGT GTGGCCTGGGTTGC TTCGCTTCGCTCGCA TERM 1139 1522461 - 1522430 - T 100 -14.5 -4.11484 | gap 1 TTCAATGCGGCAAAA CGCCAATGGCCGGG ACGAA CCCGGCCAT-GACG ATCGTGACAATCTTC nifH 1523378 - 1522488 - | nitrogenase reductase TERM 1140 1523437 - 1523466 + r 76 -13.7 -3.16564 | gap 1 GGGGCGTGCCAACCC GTTGGT-CAGGCGT TCG GCGCCTGCACCAAC TTGATGCGGTGACCG RPA1377 1524245 - 1523442 - | glyoxalase vnfD 1524697 - 1526115 + | nitrogenase vanadium-iron protein alpha chain vnfG 1526112 - 1526453 + | vanadium dinitrogenase delta subunit TERM 1141 1527471 - 1527506 + G 70 -11.8 -3.35996 | opp_overlap 1527462 1527461 AAGAAGGTGGCGCTG TTCGGCCATCCGGACC TGGT GATCGGGCTGGCCGAA TTCTGCCTCGAGGTC vnfK 1526517 - 1527905 + | nitrogenase vanadium-iron protein, VnfK subunit RPA1381 1527884 - 1528840 + | hypothetical protein RPA1382 1528871 - 1529356 + | nitrogen fixation-related protein RPA1383 1529451 - 1529894 + | ModE family transcriptional regulator ptxC 1530706 - 1529885 - | putative phosphate permease component of ATP-dependent phosphate uptake system TERM 1142 1530644 - 1530685 + g 82 -17.3 -2.91582 | opp_overlap 1530589, overlap 1530646 GATCAGGGACGATCG CAGGCGTGCGCGGCTATCC GCCT GGATAGCCGCCCAGCCCTG TGTGTGCGTCAGCTC TERM 1143 1530646 - 1530683 + g 72 -14.1 -3.0094 | overlap 1530644 TCAGGGACGATCGCA GGCGTGCGCGGCTATCC GCCT GGATAGCCGCCCAGCCC TGTGTGTGCGTCAGC ptxB 1531593 - 1530703 - | putative phosphonate transport system substrate-binding protein ptxA 1532432 - 1531578 - | putative ATP-binding component of ABC phosphonate transporter TERM 1144 1532228 - 1532191 - G 71 -3.4 -4.58395 | CCGATCTCGGAAAAA CTC-ACGGTGCCGCTCGC CGGA GCGATCAGG-CCGTTGAG CAAGCCCAGCATGGT RPA1387 1533827 - 1532499 - | hypothetical protein TERM 1145 1534950 - 1534963 + G 72 -6.7 -4.23674 | opp_overlap 1534934 CTGCTGCCACATCGG TCGCA GCGG TGCGA TTTGTCTTGCTGCCG RPA1388 1534069 - 1535079 + | hypothetical protein TERM 1146 1535157 - 1535170 + G 75 -6.7 -4.38154 | ATCGCACGCGGCGCT TCCCA CGGC TGGGA TTTTCTGGGCAATGT TERM 1147 1535274 - 1535233 - g 72 -15.1 -2.78384 | gap 1, opp_overlap 1535233 1535235 1535238, overlap 1535236 GCGTGGCCGACCAGA TGACTGCGCAGCGCCTCGCC GGC GGCGAAACGCTGCGCTG-CT GTTTTCCGATGGGGC TERM 1148 1535233 - 1535275 + G 82 -11.8 -4.13767 | opp_overlap 1535233 1535236, overlap 1535235 1535238 GCGTGGCCGACCAGA TGACTGCGCAGCGCCTCGCC GGC GGCGAAACGCTGCGCTGCTG TTTTCCGATGGGGCA TERM 1149 1535235 - 1535273 + G 80 -14.4 -3.6692 | opp_overlap 1535233 1535236, overlap 1535233 1535238 GTGGCCGACCAGATG ACTGCGCAGCGCCTCGCC GGC GGCGAAACGCTGCGCTGC TGTTTTCCGATGGGG TERM 1150 1535272 - 1535236 - g 100 -22.3 -2.66316 | opp_overlap 1535235 1535233 1535238, overlap 1535233 TGGCCGACCAGATGA CTGCGCAGCGCCTCGCC GGC GGCGAAACGCTGCGCTG CTGTTTTCCGATGGG TERM 1151 1535238 - 1535270 + G 89 -19.1 -2.94337 | opp_overlap 1535236 1535233, overlap 1535235 1535233 GCCGACCAGATGACT GCGCAGCGCCTCGCC GGC GGCGAAACGCTGCGC TGCTGTTTTCCGATG RPA1389 1535067 - 1536164 + | hypothetical protein RPA1390 1536155 - 1536853 + | hypothetical protein RPA1391 1536850 - 1537893 + | ABC transporter ATP-binding protein RPA1392 1537893 - 1538441 + | nitroreductase family proteins RPA1393 1538532 - 1539338 + | hypothetical protein RPA1394 1540996 - 1539494 - | transcriptional regulator RPA1395 1541222 - 1542790 + | trehalose/maltose binding protein RPA1396 1542824 - 1543879 + | sugar ABC transporter permease RPA1397 1543879 - 1544739 + | putative sugar ABC transporter, permease protein RPA1398 1544736 - 1545839 + | putative sugar ABC transporter, ATP-binding protein RPA1399 1545836 - 1546921 + | putative transport system ATP-binding protein RPA1400 1546928 - 1547713 + | glutamine amidotransferase glnAIII 1547728 - 1549113 + | putative glutamine synthetase III TERM 1152 1550173 - 1550199 + G 74 -5.8 -4.4648 | gap 1, overlap 1550176 GCTTGCCATTGCGGA TCGGGGCGCGC GCTTCA GCGCGACC-GA TTTTCTGGTCGCGCT RPA1402 1549121 - 1550575 + | putative Glu-tRNA amidotransferase, subunit A TERM 1153 1551006 - 1550994 - g 73 -4.1 -4.59773 | overlap 1550995 CCGCAGCCGGAAAAA CGCAT CAA ATGCA TCAGTCACGGCCGGC RPA1403 1550579 - 1551406 + | glutamine amidotransferase RPA1404 1553496 - 1551670 - | amidase RPA1405 1557041 - 1553493 - | putative urea amidolyase TERM 1154 1554125 - 1554144 + g 81 -10.6 -4.09685 | opp_overlap 1554121 1554123 AGATGCACATATAGG CGCCGCCG ATGC CGACGGCG TTTTCGGGCGTCCAG TERM 1155 1556280 - 1556320 + g 75 -11.8 -3.73072 | gap 1, overlap 1556262 1556282 GACCGCGGCCTGATG CAGCCGCGCCC-GCATCTC GTCC GAGATGCCGGGCGCCGGGG TTTCCTCGACCACTT RPA1406 1557679 - 1557044 - | hypothetical protein RPA1407 1558521 - 1557682 - | hypothetical protein TERM 1156 1558409 - 1558456 + g 75 -13.5 -3.45023 | gap 3 GGCGCGCCGTCGCGC GGCG-TCGG-CGGCGGCAGG-GCC TTC GGCGCCTGCTGCTGGCCCAGCGCC TTGTGCTGCTCGTAG TERM 1157 1558592 - 1558543 - R 79 -9 -4.16842 | gap 1, opp_overlap 1558566, overlap 1558544 CTCACGGTGAACAAA CGCCGGGTCGTCCCGGCTCATGC TCCCT GTGCG-GCCGGGTCGTCCCGGCC GGAGCGGATTGGATG TERM 1158 1558591 - 1558544 - R 71 -12.5 -3.09784 | gap 1, opp_overlap 1558566, overlap 1558543 TCACGGTGAACAAAC GCCGGGTCGTCCCGGCTCATGC TCCCT GTGCG-GCCGGGTCGTCCCGGC CGGAGCGGATTGGAT RPA1408 1559351 - 1558560 - | putative ABC transporter protein RPA1409 1560166 - 1559348 - | taurine transport system permease protein RPA1410 1561271 - 1560201 - | taurine transport system protein RPA1411 1562437 - 1561646 - | enoyl-CoA hydratase/isomerase TERM 1159 1562417 - 1562401 - G 72 -13.7 -3.01924 | opp_overlap 1562413 1562416 TATGGCGTTCGAACA CGACGGC ATC GCCGTCG GCTGCGCTGCGTGCA RPA1412 1562558 - 1564117 + | putative fatty-acid--CoA ligase RPA1413 1565213 - 1564275 - | IclR family transcriptional regulator TERM 1160 1564496 - 1564511 + g 77 -4 -4.74706 | overlap 1564489 1564508 GGGCCATCTCACGCA TCGATT GGGT GATCGA TTTTTCGATCTTCGG RPA1414 1565333 - 1566193 + | MaoC-like dehydratase TERM 1161 1566235 - 1566225 - f 73 -6.8 -4.25104 | CCGCGTGCAGGAAAA CGGT GCG ACCG GCCTGCGGAGAGTGA TERM 1162 1566654 - 1566633 - g 75 -4.3 -4.69053 | CATTACCGAAGAAAA GGTGCCGCT GCTG ACCGGTACC ATCCTCAGCGCCCAG RPA1415 1566319 - 1567563 + | branched chain amino-acid ABC transporter substrate-binding protein TERM 1163 1567688 - 1567723 + G 71 -12.7 -3.34344 | gap 2, opp_overlap 1567633 1567698, overlap 1567686 1567678 ATCGGCCCCAACGGC GCCGGCAAGACGACGCT GTTC GGCGTCGTC-T-CCGGC TTCATTGCGCCGTCG RPA1416 1567571 - 1568290 + | putative branched-chain amino acid transport system ATP-binding protein RPA1417 1568283 - 1568987 + | putative branched-chain amino acid transport system ATP-binding protein TERM 1164 1569110 - 1569122 + G 71 -9.1 -3.84825 | CCGGCATCGTCAACT TCGCC CAT GGCGA TTTCATCTCACTGGC RPA1418 1569001 - 1569864 + | transport system permease protein RPA1419 1569861 - 1570871 + | transport system permease protein TERM 1165 1570922 - 1570879 - T 79 -8.1 -4.27316 | gap 2, overlap 1570880 CGTCGTAAGCCAAAA CCATCACCGG--CCGGGAGCG ACTA CGCTCCCGGTGCCAGCGCTGC ACCGGCATCGCGGCG TERM 1166 1570921 - 1570880 - T 70 -11.6 -3.16068 | gap 2, overlap 1570879 GTCGTAAGCCAAAAC CATCACCGG--CCGGGAGCG ACTA CGCTCCCGGTGCCAGCGCTG CACCGGCATCGCGGC ybdE 1574057 - 1570899 - | heavy metal efflux pump CzcA RPA1421 1575457 - 1574054 - | efflux protein TERM 1167 1575497 - 1575536 + r 75 -12.1 -3.55622 | gap 2, opp_overlap 1575499 1575502, overlap 1575499 CGAATTCGGGAGATG AAGGAC-G-GCGGCGCCGC GGCT GCGGCGCCGCGCTGGCCTA TTTGAACGCCTTGAC TERM 1168 1575534 - 1575499 - R 82 -14.7 -3.26319 | gap 2, opp_overlap 1575497 1575499, overlap 1575502 AATTCGGGAGATGAA GGAC-G-GCGGCGCCGC GGCT GCGGCGCCGCGCTGGCC TATTTGAACGCCTTG TERM 1169 1575499 - 1575534 + r 82 -14.7 -3.35522 | gap 2, opp_overlap 1575499 1575502, overlap 1575497 AATTCGGGAGATGAA GGAC-G-GCGGCGCCGC GGCT GCGGCGCCGCGCTGGCC TATTTGAACGCCTTG TERM 1170 1575528 - 1575502 - R 84 -17.3 -2.81547 | gap 1, opp_overlap 1575499 1575497, overlap 1575499 TCGGGAGATGAAGGA CGGCGGCGCCGC GGCT GCGGCGCCG-CG CTGGCCTATTTGAAC RPA1422 1575932 - 1575534 - | hypothetical protein TERM 1171 1575752 - 1575769 + g 71 -12.7 -3.24924 | overlap 1575750 AGATCACCGCGCCTT CCACCGG CTTG CCGGTGG TCTTGTGGGTGAGGC TERM 1172 1575957 - 1575981 + H 84 -11.4 -4.15044 | ACGTGTCTGATCTCG TGCTGCGGGC GAACG GCACGCAGCA TTTATTGGCGCGGGC RPA1423 1576971 - 1577915 + | hypothetical protein TERM 1173 1578059 - 1578117 + G 100 -18.1 -3.85698 | gap 2 CGAATGCGTTCTTCT CGGCGCTGCCGA-CCGGG-GCGGTTCCGG AGC CCGGCGCCGCACTTGGGTCGGCGCCGCTG TTTGTGGCCGAGCCG TERM 1174 1579277 - 1579301 + G 89 -15.1 -4.10179 | TCTGCCACATGCCGG TCGACGTCCAG GCG CTGGATGTCGA TTTCTATGCGTTCTC RPA1424 1577902 - 1579875 + | selenocysteine lyase cysE1 1580040 - 1580987 + | serine acetyltransferase TERM 1175 1581062 - 1581074 + F 72 -2.6 -4.68512 | overlap 1581053 1581064 GTGATATGCCGTCGT TGCG ACGGG CGCG TTGTTTTTATTCTCC TERM 1176 1581064 - 1581077 + F 84 -4.5 -5.18726 | overlap 1581053 1581062 GATATGCCGTCGTTG CGACG GGCG CGTTG TTTTTATTCTCCGGG RPA1426 1581162 - 1582283 + | ABC transporter, ATP-binding protein RPA1427 1582273 - 1582941 + | putative ABC transporter, permease protein RPA1428 1582970 - 1583743 + | lipoprotein TERM 1177 1583784 - 1583803 + T 78 -15 -2.97735 | opp_overlap 1583778 1583776, overlap 1583779 CACAAACCACCGTCA TCCCCCGC GAAA GCGGGGGA TCTAGTATTTCAGTG TERM 1178 1584068 - 1584041 - T 95 -20.6 -3.31792 | TGACGATGCGGACAA GGCGGCGGAACG CTGA CGCTCCGCCGCC TGGCCTAAGTCGTCC RPA1429 1585541 - 1584105 - | putative coenzyme F390 synthetase TERM 1179 1585462 - 1585491 + g 100 -21.5 -3.36878 | gap 1, opp_overlap 1585416 AGTGTTCCTGAATGC CGACGACCGGCCGC TGG GCGGCCGGTCG-CG TTGTCGATGACTGAA RPA1430 1586323 - 1585538 - | putative outer membrane protein TERM 1180 1585815 - 1585761 - G 71 -2.7 -4.58395 | gap 1 TTGACCGCCGAAAAA TCGAGATCGTTCAGCGAG-CGCGGCA GCTG CGCGGCGTCAAGCTCGACGATCTTGA GATGCTTGGGATTCT TERM 1181 1586458 - 1586411 - H 70 -9.8 -3.57144 | overlap 1586421 1586422 GCGGCCATTTCGAAA TCCACAACAAGGCGAGATCGGG ATTT CCCGATCCTGCACTGCCGCAGA AGATTCGTGTCGTGG TERM 1182 1587433 - 1587421 - H 71 -9.1 -3.72893 | GATGTCTCGATCAAA TGCCG AGT CGGCA CTCCGGTCTCGCAGC draT1 1587454 - 1588287 + | putative NAD+ ADP-ribosyltransferase TERM 1183 1588367 - 1588405 + T 95 -20.4 -3.16742 | opp_overlap 1588391 AGCGCAGCTCGCGAA CCCGGAATCTCGACGTTC AGA GCACCTCGAGATTCCGGG TTCGTGGCCCTTCGG RPA1432 1588989 - 1588459 - | putative nitroimidazole resistance protein RPA1433 1589637 - 1589047 - | hypothetical protein RPA1434 1590326 - 1589634 - | hypothetical protein TERM 1184 1590389 - 1590356 - R 74 -14.6 -2.66964 | opp_overlap 1590384, overlap 1590353 TTAGTCAGGAGAGGA GTCCGGCGACGG ACATGGCAAA CCGCCGCCGGAC CAGATCTTGAGCGTG anfK 1591791 - 1590406 - | alternative nitrogenase 3 beta chain TERM 1185 1591565 - 1591530 - G 81 -16.2 -3.14602 | gap 1, overlap 1591528 GGTAGCGCATCAAGA GCACG-TCGACCGCTTC CTC GACGCGGTCGAGCGCGC CGAACACCGCGCCGT anfG 1592244 - 1591804 - | dinitrogenase 3 delta subunit TERM 1186 1592083 - 1592101 + g 73 -13.2 -3.21747 | overlap 1592086 CCACGCCCGCGAGTG GAACTGCC AAA GGCAGTTC TTCATGATCCAGTCG anfD 1593825 - 1592257 - | putative nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) nifH 1594702 - 1593875 - | nitrogenase reductase TERM 1187 1595193 - 1595172 - R 100 -17.3 -4.27316 | TCCGCCAACGCAAAA CGGCGGCTC GTAA GAGCCGCCG TCAGAAATTCCGAAG anfA 1596854 - 1595226 - | sigma-54 dependent, Iron nitrogenase transcriptional regulator, AnfA TERM 1188 1596117 - 1596138 + g 71 -12.3 -3.30124 | GCCGAGCAGCAGCAC GGTGGCCTT GGTC GAGGCCACC TTGTGCACCATGGCG TERM 1189 1596194 - 1596220 + g 71 -2.8 -4.57837 | opp_overlap 1596204, overlap 1596195 1596206 TGCCGATGATGTTGG TCGGGCGAAAGC GCT GCTTCAGCTCGC TTTTTAGCCGCCTGT TERM 1190 1596405 - 1596362 - G 86 -18.2 -3.0094 | gap 1, opp_overlap 1596363 1596378 GCTGATTCATATAGA CGCGCTCGGCGCAGATGGTGC CGA GCACCTTCTGGGC-GAGCACG ATCGGCACGCAGAAG RPA1440 1597600 - 1597076 - | hypothetical protein TERM 1191 1597332 - 1597355 + g 73 -11 -3.72695 | gap 1, opp_overlap 1597317 1597318, overlap 1597336 CCGGCGAAACGTTCC GGCG-CCGAGC TGC GTTCGGGCGCC TTTGGTAAGGCGGCT TERM 1192 1597436 - 1597446 + g 75 -6.8 -4.42386 | CAATGTCTGACCGGA CGCA AGT TGCG TTTTGTCGGTCGCGG TERM 1193 1597760 - 1597726 - R 73 -12.9 -3.24563 | overlap 1597724 1597715 1597748 AAAAGCGGGACAAGA TGGAAGCGCGCTG GATCAAAAG CTGCGCGCTTCCA CGCCCGCAAAGATCA RPA1441 1598604 - 1597783 - | uridylate kinase RPA1442 1599426 - 1598614 - | uridine monophosphate kinase RPA1443 1600534 - 1599719 - | GntR family transcriptional regulator TERM 1194 1600934 - 1600980 + G 72 -13.7 -3.06183 | gap 2, overlap 1600923 1600957 GGCGCCGCAGCGCCG CTGCTGGCGGTGCGCGATCTGTC GCT GTC-GTTCGCG-ACCGCCGGCGG TTCCCTGCCGATCAC RPA1444 1600910 - 1601911 + | putative oligopeptide binding protein precursor RPA1445 1601908 - 1602957 + | putative oligopeptide transport ATP-binding protein TERM 1195 1603452 - 1603430 - g 70 -2 -4.66833 | gap 1, opp_overlap 1603441, overlap 1603431 1603432 GCTGAAGCTGAAAAA TC-CCGACA CGGCGC TGCCGGCGA TCTTGTCGGATCGCG RPA1446 1602948 - 1604501 + | peptide ABC transporter TERM 1196 1604493 - 1604546 + F 76 -10.1 -3.84648 | opp_overlap 1604507, overlap 1604507 1604536 1604538 TTCGAGAACATCTCG CTCGCCTGATCAAACGGCGCCGCGA CTGC TCGCGGCGCCGTTCTGCCAAATGGG TTTGGTCATGTTGAA TERM 1197 1604532 - 1604507 - f 100 -21.9 -3.72576 | opp_overlap 1604493 1604507 GCTCGCCTGATCAAA CGGCGCCGCGA CTGC TCGCGGCGCCG TTCTGCCAAATGGGT TERM 1198 1604507 - 1604532 + F 100 -21.9 -3.30243 | opp_overlap 1604507, overlap 1604493 GCTCGCCTGATCAAA CGGCGCCGCGA CTGC TCGCGGCGCCG TTCTGCCAAATGGGT RPA1447 1604542 - 1605510 + | putative oligopeptide ABC transporter (permease) RPA1448 1605507 - 1606391 + | putative oligopeptide ABC transporter (permease) RPA1449 1606418 - 1608133 + | acyl-CoA synthetase TERM 1199 1610029 - 1610008 - g 73 -12.3 -3.4072 | gap 1 CACCCTCGATGAGAA CCGCCCCGAC TCG GTCGGG-CGG CGGCGCAAGACCAAT RPA1450 1608197 - 1611508 + | putative pyruvate carboxylase RPA1451 1611539 - 1612492 + | hypothetical protein RPA1452 1612654 - 1612499 - | hypothetical protein TERM 1200 1613212 - 1613175 - g 70 -13.4 -3.02461 | CAAGCTGTTCGAATA TGCCGGCGAGATCGGC CGCGGC GCCGACATCGACGGCA ACACCTTCTTCACGC norE 1612792 - 1613400 + | putative denitrification protein NorE TERM 1201 1613489 - 1613499 + G 76 -8.2 -4.25104 | overlap 1613479 CTCCTCAGTCGCGGT GCCG TGG CGGC TTTTGCTGGCGGCAC RPA1454 1613405 - 1613674 + | hypothetical protein norC 1613786 - 1614238 + | nitric-oxide reductase subunit C norB 1614273 - 1615622 + | nitric-oxide reductase subunit B TERM 1202 1615627 - 1615656 + F 89 -14.9 -3.90112 | opp_overlap 1615624, overlap 1615629 CGGCCGAATAGACCC CTGGCGGCCACGG GGAT CCGTGGCCGCCTC TTTCGTTCACGGAGA TERM 1203 1615629 - 1615654 + F 100 -21.9 -3.54146 | opp_overlap 1615624, overlap 1615627 GCCGAATAGACCCCT GGCGGCCACGG GGAT CCGTGGCCGCC TCTTTCGTTCACGGA norQ 1615677 - 1616489 + | regulatory protein NorQ, ATPase norD 1616615 - 1618525 + | dinitrification protein NorD TERM 1204 1618516 - 1618546 + T 76 -12.7 -3.4582 | gap 1, overlap 1618514 CATTTATCGCAATCT GATGGGGTGA-CCG GCCG CGGCTCACTCCATC TCTTTCATCACCTGC RPA1461 1620434 - 1619349 - | hypothetical protein RPA1462 1621665 - 1620457 - | hypothetical protein ilvD2 1621994 - 1623850 + | dihydroxy-acid dehydratase RPA1464 1624776 - 1623973 - | glutamine amidotransferase RPA1465 1625022 - 1626836 + | chloride channel RPA1466 1628655 - 1626850 - | amidase RPA1467 1629317 - 1628652 - | GntR family transcriptional regulator RPA1468 1629790 - 1629395 - | hypothetical protein TERM 1205 1629808 - 1629863 + r 71 -13.2 -3.06696 | gap 2, overlap 1629811 TCAGAAATCCTTCGG TCGCGGTGCGCGGGCGACACCGGCGC GTTCCA GCG-CGGCGGCGAC-GCGCAGCGCGA TGTCTTCGCGCCACG gatA1 1631250 - 1629793 - | amidase TERM 1206 1631461 - 1631416 - R 81 -15.5 -3.05715 | gap 1 AAGCTTGGTATTTAA GTTCGTCATTCCGGGCTCACGC TTC GCGTGC-CCCGGAATGACGAGT GGAGGGTGGCACAGC RPA1470 1633305 - 1631482 - | putative dipeptide ABC transporter TERM 1207 1631874 - 1631833 - G 81 -15.2 -3.57462 | gap 1, opp_overlap 1631833, overlap 1631846 GAGCTGATGCGGAAA CCGGTCGAGCAGATCGAGC GGCAG GC-CGACCTGCTCGGCCAG TTCCTCGCAGCGCGC TERM 1208 1631833 - 1631874 + g 72 -13 -3.14132 | gap 1, opp_overlap 1631833 1631846 GAGCTGATGCGGAAA CCGGTCGAGCAGATCGAGC GGCAG GC-CGACCTGCTCGGCCAG TTCCTCGCAGCGCGC RPA1471 1634375 - 1633461 - | putative dipeptide ABC transporter (permease) RPA1472 1635393 - 1634380 - | putative dipeptide transport permease protein RPA1473 1637233 - 1635563 - | peptide transport system substrate-binding protein TERM 1209 1636576 - 1636588 + g 86 -9.1 -4.67011 | GCTTGGTGTATTCGA GACCC CAC GGGTC TTTTTCGGTCGCGTT TERM 1210 1637522 - 1637501 - R 100 -18.7 -5.07652 | GTGGCCAAAACAAAA GCGGCGGGG AAAT CCCCGCCGC CTGCGTCGTCAGTGG RPA1474 1638025 - 1637561 - | hypothetical protein RPA1475 1638509 - 1638270 - | hypothetical protein RPA1476 1638835 - 1639842 + | putative periplasmic solute-binding protein TERM 1211 1639853 - 1639878 + F 74 -14.7 -2.65264 | GTTGAGTCGATCGGC TGTCCCGGCTG GCGA CGGCCGGGACG TCGTCTGAATCATGA RPA1477 1639890 - 1640705 + | putative permease protein TERM 1212 1641203 - 1641234 + G 72 -13.6 -3.20858 | gap 1, opp_overlap 1641199, overlap 1641212 CCCTCGACGAAGGCG CGGCCTCGCTCGGCG CAT CGCCG-GCGCGGCGG TTCGTCAATATCATC RPA1478 1640710 - 1641495 + | putative permease protein RPA1479 1641492 - 1642553 + | putative transport system ATP-binding protein cpdA 1642550 - 1643407 + | putative ICC protein RPA1481 1643544 - 1643906 + | response regulator receiver (CheY-like protein) TERM 1213 1644076 - 1644093 + G 77 -7.7 -4.41047 | gap 1, overlap 1644078 TGCCTGCTGAGCGTG GT-CGCCG CCG CGGCGTAC TTTTCATTCAGCCAT RPA1482 1644037 - 1644882 + | hypothetical protein RPA1483 1646128 - 1644893 - | NAD binding site:FAD dependent oxidoreductase TERM 1214 1645663 - 1645643 - G 91 -9.6 -4.78149 | opp_overlap 1645643 1645644, overlap 1645644 GCGATAACCCAAAAA GGCGCCGG GCAGG CCGGCGCG TTTGCGAAGTTCGTG TERM 1215 1645662 - 1645644 - G 75 -13.1 -3.46167 | opp_overlap 1645644 1645643, overlap 1645643 CGATAACCCAAAAAG GCGCCGG GCAGG CCGGCGC GTTTGCGAAGTTCGT TERM 1216 1646204 - 1646176 - H 91 -9.6 -4.59773 | gap 1, opp_overlap 1646176 GCCGATCGTGAAAAA GGTCTCGCACCGC CGAC ACGGC-CGAGACC TTTTCCGATTGCTGA pgm2 1646478 - 1648130 + | phosphoglucomutase TERM 1217 1648401 - 1648421 + G 82 -12.5 -3.9712 | CGGGCAAGGTTGGTC GGCGCGCTC GGC GAGCGCGGC TTTCTGATCGCCTAC nnrU 1648233 - 1649000 + | NnrU family protein TERM 1218 1649036 - 1649067 + F 86 -13 -4.07687 | opp_overlap 1649035 1649040 TGCGAGCGAAGCGAG GCAATCCAGCTCCG TGCA CTGAGCCGGATTGC TTTTCGACAGCGCCT RPA1486 1649216 - 1650442 + | heme-Cu protein NnrS RPA1487 1650481 - 1650729 + | hypothetical protein RPA1488 1651935 - 1650733 - | L-carnitine dehydratase/bile acid-inducible protein F RPA1489 1652739 - 1652068 - | two-component LuxR family transcriptional regulator phyB4 1655071 - 1652759 - | bacteriophytochrome PhyB TERM 1219 1653192 - 1653219 + g 76 -14.8 -3.19602 | overlap 1653191 CAGGCGAGGCGGTTG GCCTGGCGGCCG ACGT CGGCGGTCAGGC TCTTCATCTCGGCGA TERM 1220 1654888 - 1654844 - G 70 -6.2 -4.25104 | gap 1, overlap 1654845 1654874 CTGGTCTGACGAAAA GGCCGTGGAGGCGGCGGTGCC CGGC AACAACTCCGCCGCCGCG-CC GAGCAGCGATGCGGT pucBe 1655417 - 1655572 + | light harvesting protein B-800-850, beta chain E (antenna pigment protein, beta chain E) (LH II-E beta) pucAe 1655585 - 1655764 + | light harvesting protein B-800-850, alpha chain E (antenna pigment protein, alpha chain E) (LH II-E alpha) TERM 1221 1655793 - 1655819 + F 73 -10.9 -3.6053 | gap 1, overlap 1655793 1655790 1655796 GAAGCTGTCGTGGCT G-GACCGGGATC CAAG GGTCCCGGTCGC TTGCTTTGTAGCCCG TERM 1222 1656545 - 1656565 + G 81 -11.1 -4.07568 | GCGAGCGCCATCATC TTCGGCGTG CTG CTCGCCGAA TTTTCACCGGGACGC TERM 1223 1657223 - 1657276 + G 85 -10.2 -4.21811 | gap 1 GGTATTCTTCGCGAC GTGGTAACC-GCTTATGCGCCGCAC GGTTG GGGCGGCGCCGCGGCAGGTTATCAC TTTGTCTATTACCTC pucC 1655951 - 1657387 + | chlorophyll major facilitator superfamily (MFS) exporter PucC RPA1494 1657406 - 1658056 + | hypothetical protein RPA1495 1658072 - 1658365 + | hypothetical protein TERM 1224 1658386 - 1658423 + F 100 -15.5 -4.18018 | overlap 1658387 1658389 CCGGCCCTACAGGTC CCATGACGCCGCGGGCA GTAA TGTCCGCGGCGCCGTGC TTTTGGGTCGCAAGA TERM 1225 1658387 - 1658422 + F 91 -19 -3.10597 | overlap 1658386 1658389 CGGCCCTACAGGTCC CATGACGCCGCGGGCA GTAA TGTCCGCGGCGCCGTG CTTTTGGGTCGCAAG TERM 1226 1658389 - 1658420 + F 83 -15.8 -3.11208 | overlap 1658387 1658386 GCCCTACAGGTCCCA TGACGCCGCGGGCA GTAA TGTCCGCGGCGCCG TGCTTTTGGGTCGCA TERM 1227 1658465 - 1658442 - f 76 -5.9 -4.63218 | overlap 1658443 TGGGTCGCAAGAAAA TGCTGGGCA AACGCG CGCCCAGCG GTCAATCTGTTTCCA RPA1496 1658506 - 1660047 + | monooxygenase TERM 1228 1660069 - 1660110 + F 71 -11.5 -3.51234 | overlap 1660052 1660067 1660072 GTAGCGGCTTGTCTT CAAGCGCCTGCGGATTCTG CGCG CGAGGTCTGCAGGCGCTCG TCTTTAACTTTCGAT TERM 1229 1661070 - 1661088 + G 81 -11.6 -3.90112 | overlap 1661071 GCCGGTGTCCGAGAT GGCGCGGC TTC GCCGCGCG TTTGATTCCGGCGAG TERM 1230 1661071 - 1661087 + G 73 -15.1 -2.93853 | overlap 1661070 CCGGTGTCCGAGATG GCGCGGC TTC GCCGCGC GTTTGATTCCGGCGA mexC1 1660402 - 1661601 + | putative RND multidrug efflux membrane fusion protein MexC precursor TERM 1231 1661589 - 1661620 + F 88 -6.4 -5.24129 | gap 1, overlap 1661576 CACGGGTTCGGCGGA CGCGGTGCGATAGGC GCC GCCCGATGC-CCGCG TTTTTTATCGACAGG TERM 1232 1662634 - 1662595 - g 73 -13.6 -3.30771 | overlap 1662598 1662628 CGAGATCCCCTACAA CATCACCCCGGTGGTCGA GGCC TCGATCACCAAGGTGCTG CACACCCTGGTCGAA mexD2 1661612 - 1664779 + | RND multidrug efflux transporter MexD TERM 1233 1664933 - 1664948 + G 81 -7.6 -4.66833 | opp_overlap 1664935 GAACGGAGACCAACC CATCAG CTGG CTGATG TTTTTCACATTGGCG RPA1499 1664916 - 1665368 + | hypothetical protein TERM 1234 1665424 - 1665385 - T 70 -10.6 -3.63068 | opp_overlap 1665392, overlap 1665386 1665410 TCACATCAGTCTAAA TGTCGAAGGCCCCGGTTC CCAA GAACCGGGGCCTTTTGCT GTCGCGCGAAACGCC TERM 1235 1665423 - 1665386 - T 72 -14.1 -2.7752 | opp_overlap 1665392, overlap 1665385 1665410 CACATCAGTCTAAAT GTCGAAGGCCCCGGTTC CCAA GAACCGGGGCCTTTTGC TGTCGCGCGAAACGC TERM 1236 1665392 - 1665417 + T 100 -20.5 -4.34402 | opp_overlap 1665386 1665385 1665410 AGTCTAAATGTCGAA GGCCCCGGTTC CCAA GAACCGGGGCC TTTTGCTGTCGCGCG TERM 1237 1665527 - 1665507 - T 81 -14 -3.60151 | opp_overlap 1665501 1665500 CGCCGGAAACGAGAA TGGCCGGG ACAAG CCCGGCCA TCATGGAATTTTGAT RPA1500 1666225 - 1665626 - | hypothetical protein TERM 1238 1665880 - 1665899 + gT 73 -12.8 -3.15544 | opp_overlap 1665872, overlap 1665890 1665891 TAAACGAGCCGGAAT CGTCGGCG GTTT CGCCGGCG TTGATCAGCATGCCA RPA1501 1667417 - 1666188 - | coenzyme F420 hydrogenase beta subunit TERM 1239 1667438 - 1667460 + r 72 -12 -3.37368 | opp_overlap 1667436 CGTCTTGTAGGAACC GGCCAATGGC CTC GCCATTCGCC TTAAGTTTCTCTCTT RPA1502 1667966 - 1667478 - | hypothetical protein TERM 1240 1667781 - 1667763 - G 70 -13.1 -3.05384 | overlap 1667726 GCCGCCGGCATCGAA GGCGCCG CCGTC CGGCGCC AGGTCCATCGCGATC RPA1503 1669576 - 1667966 - | hypothetical protein TERM 1241 1668399 - 1668358 - G 85 -9.9 -4.19238 | overlap 1668359 TGCCGAAGCCGAAAA TGTTGTAGGCGATCGCCGC CACG GCGGCGATCGCCAGCGCCC CGATTGCGACGCGCG TERM 1242 1668398 - 1668359 - G 72 -13.4 -3.11222 | overlap 1668358 GCCGAAGCCGAAAAT GTTGTAGGCGATCGCCGC CACG GCGGCGATCGCCAGCGCC CCGATTGCGACGCGC TERM 1243 1668716 - 1668661 - G 70 -11.6 -3.40403 | gap 1 TCGCTGTCACCAGAA GCTGCTTCCACGTCAGGCTGGCGC-CC ATC GGTGCGGCGGCCGCGCGCGGCAGCAGC TTCGACAGCGGCCAG RPA1504 1670889 - 1669576 - | hypothetical protein TERM 1244 1671458 - 1671411 - g 77 -7.7 -4.3255 | gap 3, opp_overlap 1671453 CGGCCAACGAAGAAA CGCCCGGCCTGATCGTCGCTGCCA CGC TGGC-GCG-CGATCCTGCCTG-CG ACTCGCTGGTGTTGC RPA1505 1671137 - 1672120 + | porphobilinogen deaminase bchI 1672126 - 1673148 + | magnesium chelatase ATPase subunit I bchD 1673145 - 1674917 + | magnesium chelatase subunit D RPA1508 1675691 - 1674960 - | hypothetical protein TERM 1245 1676037 - 1676014 - R 100 -18.2 -4.55128 | opp_overlap 1676014 1676016 ATCCGCAAAGCAAAA GAGCCGGTGC GGCT GCACCGGCTC TTCGATCAGGTCGGA TERM 1246 1676014 - 1676037 + r 90 -18.2 -3.06796 | opp_overlap 1676014, overlap 1676016 ATCCGCAAAGCAAAA GAGCCGGTGC GGCT GCACCGGCTC TTCGATCAGGTCGGA TERM 1247 1676016 - 1676035 + r 78 -15 -3.09327 | opp_overlap 1676014, overlap 1676014 CCGCAAAGCAAAAGA GCCGGTGC GGCT GCACCGGC TCTTCGATCAGGTCG hemE 1677050 - 1676073 - | uroporphyrinogen decarboxylase TERM 1248 1676373 - 1676352 - G 73 -13.7 -3.14132 | gap 1 GGTGCGTTCGACGAA CGCCGGCAGC AGC GC-GCCGGCG CCGCGCGGGAAGCCG TERM 1249 1677738 - 1677715 - g 74 -10.3 -3.80733 | opp_overlap 1677729, overlap 1677718 CGGATTCGACAAGAA GAACCAGCG CTGGAC CGCCGGTTC GCGGGCGATTCCGTG RPA1510 1677230 - 1678183 + | hypothetical protein TERM 1250 1678293 - 1678323 + G 75 -15.4 -2.70932 | opp_overlap 1678294 TGGCATGTGCAACGC ATGGGATCGCCGGC CGC GCCGGCGATCCTGC TGATTCACGGCACCG TERM 1251 1678322 - 1678294 - g 71 -14.5 -2.53263 | opp_overlap 1678293 GGCATGTGCAACGCA TGGGATCGCCGGC CGC GCCGGCGATCCTG CTGATTCACGGCACC RPA1511 1678194 - 1679081 + | Alpha/beta hydrolase fold crtI 1679157 - 1680692 + | amine oxidase TERM 1252 1680949 - 1680976 + G 91 -12.6 -4.27316 | CGCCTATCCGTCCGA CCGCGCCTTCGC CGAT GTGGTGGCGCGG TTTTCGATTCCGCCG crtB 1680689 - 1681756 + | squalene/phytoene synthase hemF 1682058 - 1682969 + | coproporphyrinogen III oxidase RPA1515 1683855 - 1683019 - | hypothetical protein TERM 1253 1683089 - 1683103 + g 75 -11.4 -3.64703 | opp_overlap 1683084 GAGCCGAACAGCGCT TCGCGG AAT CCGCGA TTTCCGTACGCGCCC TERM 1254 1683271 - 1683232 - G 70 -8.4 -3.89614 | gap 1, opp_overlap 1683240 GTGAATCTTCAGAAA CTCCGCAGCGG-CGTTCGC CTT GCGAACGGCCGCAGCCTCG TCGCGGTCGATCGCC RPA1516 1684156 - 1684290 + | hypothetical protein TERM 1255 1684489 - 1684431 - T 76 -13.9 -3.22476 | gap 2, opp_overlap 1684432 1684433 1684475, overlap 1684435 ACCACCGAGCACGAA CGCACCTAGCCCCGTCATGGCCGGCTTGC GGG ACAAGCCGGCCATGACGTTGCAACG-GC- GTTAGTTGTGGCAAC TERM 1256 1684432 - 1684489 + T 87 -19.2 -2.66274 | gap 1, opp_overlap 1684431 1684435, overlap 1684433 1684475 CCACCGAGCACGAAC GCACCTAGCCCCGTCATGGCCGGCTTG CGGGA CAAGCCGGCCATGACGTTGCAACG-GC GTTAGTTGTGGCAAC TERM 1257 1684433 - 1684490 + T 95 -19.2 -3.44325 | gap 1, opp_overlap 1684431 1684435, overlap 1684432 1684475 CACCGAGCACGAACG CACC-TAGCCCCGTCATGGCCGGCTTG CGGGA CAAGCCGGCCATGACGTTGCAACGGCG TTAGTTGTGGCAACT TERM 1258 1684487 - 1684435 - T 100 -21.3 -2.57795 | opp_overlap 1684432 1684433 1684475, overlap 1684431 CCGAGCACGAACGCA CCTAGCCCCGTCATGGCCGGCTTGC GGG ACAAGCCGGCCATGACGTTGCAACG GCGTTAGTTGTGGCA crtC 1685457 - 1684504 - | hydroxyneurosporene synthase crtD 1687021 - 1685462 - | FAD dependent oxidoreductase crtE 1687143 - 1688009 + | polyprenyl synthetase TERM 1259 1688097 - 1688124 + G 72 -11.4 -3.5936 | gap 1, overlap 1688121 CCGGCTGCTCGGCTG GCGCG-ATTCGAT CTT GTCGAATCCGCGC TTTCAGCGCTTTGCA TERM 1260 1689053 - 1689072 + G 74 -15 -3.06796 | ACCTTTACGCCATGG GCTCCGGG AAAG CCCGGAGC TTCCCTCGACTGCAG crtF 1688059 - 1689180 + | O-methyltransferase, family 2 TERM 1261 1689282 - 1689266 - f 70 -12.3 -3.16742 | CGGAATTTGGAGTAA GCGATGG ACA CCATCGC GGTCGTACTCAAGCA bchC 1689269 - 1690207 + | chlorophyll synthesis pathway protein BchC bchX 1690207 - 1691205 + | chlorophyllide reductase iron protein subunit X TERM 1262 1691399 - 1691378 - g 73 -12.9 -3.25823 | TGCCGCGCAGATGAA GGCGGCGGC GGAA GCCGCCGGC AAGAGCGACGTGCTC bchY 1691229 - 1692815 + | chlorophyllide reductase subunit Y TERM 1263 1693886 - 1693845 - g 79 -10.9 -4.00868 | gap 1, opp_overlap 1693840, overlap 1693848 GCAGCTACAACGAAA GAATGTACTTGGCCGAGACC GGT GGTCGCG-CCGTGTACATTC CGGCGTCATTCCCGG TERM 1264 1694123 - 1694092 - g 73 -13.8 -3.21199 | opp_overlap 1694116 GAGCGATGAAGCCAA GGCGCTGCTCGA CGAAGTGC TCGAGCAGCACC CGGTGCTGGTGCGGA bchZ 1692815 - 1694263 + | chlorophyllide reductase subunit Z TERM 1265 1694418 - 1694436 + F 71 -8.8 -3.85698 | ATGTCGGTTGATGTT CGGTGCGT GCT ACGCGCTG TTTCTGACCCGCGCG pufB 1694719 - 1694916 + | antenna complex, alpha/beta subunit pufA 1694932 - 1695123 + | light-harvesting complex 1 alpha chain pufL 1695255 - 1696088 + | photosynthetic reaction center subunit L pufM 1696116 - 1697039 + | photosynthetic reaction center M protein TERM 1266 1697071 - 1697106 + F 91 -17.6 -3.33037 | opp_overlap 1697069 1697066, overlap 1697063 TCTGAACGAATGATG CGCGCGCCTGATGGTA TAAA TCCAATCAGGCGCGCG TTGCTGCTTTCGGCT TERM 1267 1697244 - 1697233 - f 72 -2.2 -4.68209 | AGGCCAACAAACAAA GCCT GAGA AGAC TTCAACAATAGGGCT ppsR1 1697302 - 1698756 + | transcriptional regulator PpsR1 bchG 1698749 - 1699642 + | bacteriochlorophyll/chlorophyll a synthase TERM 1268 1700073 - 1700059 - g 82 -12.8 -3.97947 | opp_overlap 1700063 CGCACTGACGAGAAA CGCCGC GCG GCGGCG GCCACGATCGTCTGG TERM 1269 1700830 - 1700864 + G 70 -2.6 -4.60949 | overlap 1700825 1700831 1700833 1700834 CTGGGGGCGCCCGCT TTGTCCTACGCGGCGG TGT TCGCCGCGGAAGCTGG TTTGTTTGTGGTGTC RPA1531 1699645 - 1700961 + | Bch2, light harvesting pigment major facilitator family (MFS) transporter bchP 1700963 - 1702168 + | geranylgeranyl reductase tspO 1702188 - 1702652 + | TspO/MBR family protein RPA1534 1702689 - 1702961 + | hypothetical protein TERM 1270 1703056 - 1703018 - T 100 -22.7 -3.5525 | gap 1, opp_overlap 1703020 AGAGAGCTTCCCAAA CACGAAGGGCTTCGGTTC TGGC GAACCGAAGCCCT-CGTG ATTCAAGCGTCAGTA TERM 1271 1703020 - 1703054 + T 90 -19.5 -2.71731 | gap 1, opp_overlap 1703018 AGAGCTTCCCAAACA CGAAGGGCTTCGGTTC TGGC GAACCGAAGCCCT-CG TGATTCAAGCGTCAG cycA 1703507 - 1703088 - | cytochrome c, class I ppsR2 1703829 - 1705223 + | transcriptional regulator PpsR2 RPA1539 1708212 - 1707550 - | Heme oxygenase (decyclizing) TERM 1272 1708165 - 1708191 + g 75 -11.5 -3.71527 | opp_overlap 1708165 GGTCCGCACATACAA CGCGGTGACGA CGCTC TCGGCGCCGCG TTTCGCTGCTTCCAC RPA1540 1709154 - 1708273 - | coenzyme B12-binding TERM 1273 1709565 - 1709531 - g 70 -2.2 -4.67982 | gap 3, opp_overlap 1709530 1709526 1709523 1709519, overlap 1709526 CGGGACGCAACAAAA TGGACGCTGGTG-CAGG GCAT CCTGGCGCC-G-GTCCA ATTTGTGGTCTTCCT TERM 1274 1709932 - 1709974 + G 75 -14.1 -3.26319 | CGACGAGCGTCTGGC CGG-CCTGCGCGAGCCCTCGG TGT CCGGGAGC-CGCGCATGACCG TTCATGTCACAGGTT bchF 1709486 - 1709971 + | 2-vinyl bacteriochlorophyllide hydratase bchN 1709968 - 1711257 + | light-independent protochlorophyllide reductase subunit N bchB 1711260 - 1712882 + | light-independent protochlorophyllide reductase subunit B bchH 1712857 - 1716603 + | magnesium chelatase subunit H chlL 1716600 - 1717538 + | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 1275 1718170 - 1718200 + G 70 -11 -3.51924 | overlap 1718172 GCTGGCGCAATGGCA GCCCGGCCGCACCC ATC GGGTGTCGTCCGGC TTCTATACCTCGCAG bchM 1717538 - 1718239 + | Mg-protoporphyrin IX methyl transferase TERM 1276 1718307 - 1718345 + G 81 -11.7 -3.9777 | gap 1, opp_overlap 1718319 CCTGCCGTTCGCTGA CGCGGC-GACGAAGGAGC TTCC GCTCGGTCGTCTGCTGCG TTTGTCGCTGTTCCA TERM 1277 1718727 - 1718772 + G 85 -9.9 -4.18367 | opp_overlap 1718711 1718751, overlap 1718744 1718746 CGCCGGTCTTGCGCT CGCCACCGACATCGC-GCCG-GA AGAC TCGCGGCCGCGG-GTC-GTGGCG TTTCTGTATGTGATG TERM 1278 1719039 - 1719054 + G 72 -6.8 -4.18018 | gap 1, overlap 1719041 GCTGGTAGCGGTGGC GCTCGGC ACC GCCG-GC TTTTCGATGCAGGAC TERM 1279 1719461 - 1719428 - g 72 -13.9 -3.06796 | gap 2, opp_overlap 1719435 1719455 GCGCAGTGCAGGCAA CCGCCGCCG-GC-GG CGGAAT CCTGCTCGGCGGCGG CATTCGCGACGCCGT TERM 1280 1719562 - 1719580 + G 70 -10.3 -3.65522 | TACTACATCGAGATC GCGTTGC TGTTT GCAACGC TTGTTGCGGTCGGTC TERM 1281 1719657 - 1719643 - g 70 -10 -3.6502 | opp_overlap 1719643 CAGTCGTCAGCCAAA TTCGGC CTT GCCGAA TTTCCAGGTTAACTA lhaA 1718236 - 1719669 + | photosynthetic complex (LH1) assembly protein LhaA puhA 1719692 - 1720459 + | photosynthetic reaction center complex subunit H1 RPA1549 1720456 - 1721118 + | photosynthetic complex assembly protein RPA1550 1721134 - 1721640 + | photosynthetic complex assembly protein RPA1551 1721643 - 1721942 + | hypothetical protein RPA1552 1721939 - 1723036 + | magnesium-protoporphyrin IX monomethyl ester cyclase RPA1553 1723050 - 1724114 + | hypothetical protein hemA 1724111 - 1725322 + | 5-aminolevulinate synthase TERM 1282 1725377 - 1725350 - T 76 -14 -3.14602 | opp_overlap 1725352 1725373, overlap 1725348 TCTACCCGAGCAAGA CTGGCGCGCGCC CTCC GGCGCGCGCCTT TGTCTTTGAAGGGCT TERM 1283 1725352 - 1725375 + T 100 -21 -4.32857 | opp_overlap 1725350 1725348, overlap 1725373 TACCCGAGCAAGACT GGCGCGCGCC CTCC GGCGCGCGCC TTTGTCTTTGAAGGG TERM 1284 1725416 - 1725456 + T 79 -15.5 -2.90723 | gap 2, overlap 1725418 GTGTCTGCCCCTCAC GC-CG-ACCCTCTCCCCGC GAAGG GCGGGGAGAGGGAGCGTGC TGTGCTTCGGGGTGC TERM 1285 1725418 - 1725453 + T 84 -16.9 -2.69964 | gap 1, overlap 1725416 GTCTGCCCCTCACGC CG-ACCCTCTCCCCGC GAAGG GCGGGGAGAGGGAGCG TGCTGTGCTTCGGGG cbbR 1726632 - 1725664 - | transcription regulator LysR TERM 1286 1725924 - 1725902 - G 86 -7.7 -4.86731 | gap 1, opp_overlap 1725909 1725916, overlap 1725906 TGGGCCGAAATAAAA GCGA-CGCCG AGCC CGGCGATCAC CGCCTGCTTGATGGT RPA1556 1727226 - 1727915 + | phosphotransfer RPA1557 1727937 - 1728773 + | response regulator receiver RPA1558 1728789 - 1731500 + | sensor histidine kinase rbcL 1731700 - 1733157 + | ribulose bisophosphate carboxylase cbbS 1733171 - 1733593 + | ribulose-bisphosphate carboxylase small chain cbbX 1733596 - 1734522 + | cbbX protein TERM 1287 1734541 - 1734505 - T 74 -13 -3.33696 | gap 1 GTGTTCGGGAAGGAA GACG-GTCGCGACCGGT GAGC ATCGGTCGCGCCACGTC ACGCCGATGCTCGTC RPA1562 1735554 - 1734580 - | LysR family transcriptional regulator TERM 1288 1736627 - 1736650 + G 100 -19.6 -3.15249 | GCCGTCAGCATCAGC CGTCGCCGGC TGTC GCCGGCGACG TTCATCGACGATCTG RPA1563 1735691 - 1736740 + | putative nitrilase RPA1564 1736816 - 1738132 + | urea/short-chain amide transport system substrate-binding protein RPA1565 1738141 - 1739016 + | putative urea/short-chain amide transport system permease protein RPA1566 1739013 - 1740878 + | branched chain amino acid ABC transporter ATP-binding protein TERM 1289 1740951 - 1741004 + G 73 -14 -3.09635 | gap 3, opp_overlap 1740992, overlap 1740954 CCGGGTCGAGCAGGG CG-AG-GTGGTGGCCTTGCTGG-GCCG CAA CGGCGCCGGCAAGACGACCACGCTGCG TTCGATCATGGGCGT TERM 1290 1740954 - 1741000 + G 71 -14.5 -2.55544 | gap 2, opp_overlap 1740992, overlap 1740951 GGTCGAGCAGGGCGA G-GTGGTGGCCTTGCTGG-GCCG CAA CGGCGCCGGCAAGACGACCACGC TGCGTTCGATCATGG RPA1567 1740865 - 1741569 + | putative branched-chain amino acid transport system ATP-binding protein TERM 1291 1741567 - 1741621 + T 100 -26.7 -3.14463 | gap 2 CTCGGCGTCGCGTCC TGA-CGCGG-GGCCGGTGCGGCGAG GTCTCGA CTCGCCGCACCGGCCGTCGCGATCA TTGCTGCAGCGCCTT RPA1568 1742401 - 1741619 - | alpha/beta hydrolase fold RPA1569 1743700 - 1742405 - | O-acetylhomoserine aminocarboxypropyltransferase RPA1570 1745974 - 1743857 - | oligopeptidase B TERM 1292 1744003 - 1744027 + g 74 -12.2 -3.54424 | gap 1, overlap 1744003 GCCCGCCACCCGTCA TG-GTGGCGCG CAGC CGCGCCACCCA TTTGGCCGGCTCCCA dapA1 1746102 - 1746980 + | putative dihydrodipicolinate synthetase TERM 1293 1747100 - 1747059 - f 90 -13.7 -4.07687 | gap 1, overlap 1747061 1747063 AGGTTGTGGCGAAAA GAGATTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAATGAC CATCGAGAGGCACTT TERM 1294 1747098 - 1747061 - f 85 -14.9 -3.63744 | gap 1, overlap 1747059 1747063 GTTGTGGCGAAAAGA GATTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAATG ACCATCGAGAGGCAC TERM 1295 1747096 - 1747063 - f 93 -17.5 -3.39908 | gap 1, overlap 1747061 1747059 TGTGGCGAAAAGAGA TTCCGGGTTCGCGAGC TGC GCTCGCGC-CCCGGAA TGACCATCGAGAGGC RPA1572 1747205 - 1749535 + | putative carbon-monoxide dehydrogenase large subunit TERM 1296 1749597 - 1749563 - f 76 -9.3 -3.9777 | gap 2, overlap 1749565 1749569 CGCAATACCGACAAA GACACACCGGCGCATGC TAT GC-TGCGCCGGTTCG-C GCGCGGGAGAGATCG TERM 1297 1749596 - 1749565 - f 77 -13 -3.57639 | gap 1, overlap 1749563 1749569 CAATACCGACAAAGA CACACCGGCGCATGC TAT GC-TGCGCCGGTTCG CGCGCGGGAGAGATC TERM 1298 1749592 - 1749569 - f 80 -14.6 -3.23737 | gap 1, overlap 1749565 1749563 ACCGACAAAGACACA CCGGCGCATGC TAT GC-TGCGCCGG TTCGCGCGCGGGAGA RPA1573 1749613 - 1750227 + | LemA family protein RPA1574 1750232 - 1751155 + | hypothetical protein TERM 1299 1751211 - 1751228 + G 72 -8.3 -4.08767 | overlap 1751212 1751218 CTGTTCACCAGCCGC GGCGCGG TGCA CCGCGCG TTTTCGCCGGATGCG RPA1575 1751169 - 1751666 + | hypothetical protein TERM 1300 1751720 - 1751672 - T 86 -16 -3.13403 | gap 1, overlap 1751670 GGTGGTGTAGTAACA CGGCGGCATCCCACCTCTCCCCG CAAG CGGGGAGAGG-GAGAAAACACCG ACGCCTGGCCTTCGA RPA1576 1752359 - 1751748 - | putative glutathione S-transferase TERM 1301 1752628 - 1752608 - g 71 -13.9 -2.9155 | overlap 1752603 TCGGTGAACAGCAGA CCGGCGCGG CCG CCGCGACGG ACGGAGCGCAGGCGA RPA1577 1752568 - 1753539 + | hypothetical protein TERM 1302 1753601 - 1753562 - T 100 -17.2 -3.55444 | gap 1, opp_overlap 1753568, overlap 1753563 GCCTCATTCTTGAAA CTTTAACGGCGCCGGCTGT GAG ACAGCCGGCGCCGTTTT-G ATTTGGCTTTGCCGC TERM 1303 1753601 - 1753563 - T 84 -17.4 -2.73124 | opp_overlap 1753568, overlap 1753562 CCTCATTCTTGAAAC TTTAACGGCGCCGGCTGT GAG ACAGCCGGCGCCGTTTTG ATTTGGCTTTGCCGC TERM 1304 1753568 - 1753596 + T 100 -26.1 -4.59424 | opp_overlap 1753562 1753563 TTCTTGAAACTTTAA CGGCGCCGGCTGT GAG ACAGCCGGCGCCG TTTTGATTTGGCTTT TERM 1305 1753639 - 1753680 + T 71 -10.8 -3.53224 | gap 1, opp_overlap 1753656, overlap 1753640 TGCAGAGTTGTTTAG GCGCCCGCCGGACGATAGC GATTA GTTGTCG-CCGGCGCGCGA TTTCCGAACGGCGTG TERM 1306 1753640 - 1753679 + T 75 -14.3 -2.71791 | gap 1, opp_overlap 1753656, overlap 1753639 GCAGAGTTGTTTAGG CGCCCGCCGGACGATAGC GATTA GTTGTCG-CCGGCGCGCG ATTTCCGAACGGCGT fpr 1754469 - 1753696 - | ferredoxin--NADP+ reductase TERM 1307 1754445 - 1754415 - G 73 -6.1 -4.35524 | gap 1, opp_overlap 1754436, overlap 1754419 1754443 CGGTGAAACTGAAAA GCG-AGTCGGTCCA GTGC CGGACCGACAACAC CGTTTCGGTTTGGAA RPA1579 1755994 - 1754786 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1308 1754877 - 1754898 + g 72 -12.9 -3.17794 | overlap 1754876 CTATGCTCGCCGACG CCCGGCGGC TTGC GCGGCCGGG TCTTGGTGCTGCCTT putA 1759167 - 1756159 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1309 1757072 - 1757039 - G 80 -17.5 -2.78384 | gap 1, opp_overlap 1757048 TCGCCTTGCACCAGA TGCAGCGCAGCCGGCG GCA CGCCGGCTTCG-TGCA ATAGGCGCACCGCGA TERM 1310 1757048 - 1757064 + g 76 -15.1 -3.16564 | opp_overlap 1757039 ACCAGATGCAGCGCA GCCGGCG GCA CGCCGGC TTCGTGCAATAGGCG RPA1581 1759231 - 1759959 + | hypothetical protein cyaA 1761765 - 1759984 - | ferredoxin:adenylate/guanylate cyclase TERM 1311 1760338 - 1760393 + g 74 -12.6 -3.53012 | gap 3 ATTGAGTTCATCGAT CGCCGCGCCGATGGCC-GCGGCAGCGC GAACG GCGTTACGGCAGGCC-TC-GCGCGGTG TTTCGGCAAGCCCGA TERM 1312 1761711 - 1761723 + g 95 -6.3 -5.4756 | overlap 1761696 GCTTTTTCCCGCGGG CAGAA GCG TTCTG TTTTTTGTTCGGCTT RPA1583 1763067 - 1761958 - | hypothetical protein TERM 1313 1762913 - 1762950 + g 72 -12 -3.5394 | gap 3, overlap 1762919 1762944 GGCGGGGGGGGCGGT GCGG-CGCC-GGCC-GCAG ACG CGGCAGGCCTGGCGTCCGC TTTCGCGGACGGTTT RPA1584 1764533 - 1763064 - | hypothetical protein TERM 1314 1764925 - 1764945 + G 70 -13.3 -3.05844 | TGATCGCCGCCACCG CGCTGGTCA CGC TGACCGGCG TGTTCGCATCCACGC RPA1585 1764777 - 1765472 + | hemolysin III TERM 1315 1765670 - 1765692 + G 78 -14.1 -3.60098 | CGTGCCGAAGCGGTC GCCGCGTCG ATCGG CGGCGCGGC TTTCAAGTGCGACGT RPA1586 1765532 - 1766332 + | short-chain dehydrogenase/reductase SDR TERM 1316 1766474 - 1766498 + F 90 -13.6 -4.02817 | GCGTCTGTTATGCGA TCGCACCGTC GTCCG GGCGGTGCGA TTCTTGTTATCGGCA RPA1587 1766530 - 1766814 + | hypothetical protein TERM 1317 1766828 - 1766855 + T 71 -9 -3.77464 | overlap 1766849 AACGGTCAGGCTGCC CGCACGATCTCG CGGA CGTGGTCGAGCG TTTGCTCGATCATGT RPA1588 1767900 - 1766818 - | putative L-allo-threonine aldolase TERM 1318 1767971 - 1768023 + r 88 -14.3 -3.70773 | gap 3, opp_overlap 1767981 ATTGGTACCATCTCT CCGCAAGTCATTCCGGG-GCGCTCGC GTCA GCGAGCGAACCCGGAAT--CTCGCGG TTGTTCGATGTGACC TERM 1319 1768015 - 1767981 - R 79 -16.5 -2.52464 | gap 1, opp_overlap 1767971 TCTCTCCGCAAGTCA TTCCGGG-GCGCTCGC GTCA GCGAGCGAACCCGGAA TCTCGCGGTTGTTCG TERM 1320 1768071 - 1768128 + r 70 -10.5 -3.59979 | gap 1, opp_overlap 1768124 1768126, overlap 1768065 1768072 GAACTCCCGTGCGCA ATCTCGTCGAGATTCCGGGTTCGCTCAC GTC GTGAGCGC-CCCGGAATGACAACGAGCC TTTGGGATGCGCAGC TERM 1321 1768072 - 1768127 + r 72 -14 -2.75844 | gap 1, opp_overlap 1768124 1768126, overlap 1768065 1768071 AACTCCCGTGCGCAA TCTCGTCGAGATTCCGGGTTCGCTCAC GTC GTGAGCGC-CCCGGAATGACAACGAGC CTTTGGGATGCGCAG TERM 1322 1768155 - 1768174 + r 86 -16.4 -3.18383 | opp_overlap 1768126 1768124 1768155 CAGCGCAAACAAAAA GGCCCCGG CGAA CCGGGGCC TTAATGCATCGGACT TERM 1323 1768174 - 1768155 - R 100 -16.4 -5.28942 | opp_overlap 1768155, overlap 1768126 1768124 CAGCGCAAACAAAAA GGCCCCGG CGAA CCGGGGCC TTAATGCATCGGACT rpsD 1768830 - 1768213 - | 30S ribosomal protein S4 TERM 1324 1768709 - 1768735 + g 70 -13.6 -3.02461 | overlap 1768696 GACAGCTTGCCCTTG CGGCGCTGGCCG TGC TGGCCGGGGCCG TATTCGCGGCGGTTG TERM 1325 1768974 - 1768944 - R 89 -16.1 -3.53444 | gap 1, opp_overlap 1768964, overlap 1768949 1768961 CCACGGGTCGCGAAA CGCAACGCGGGCCG AAAC CGGCCCGCGA-GCG GGGGCTTTCTAGGGG TERM 1326 1768970 - 1768949 - R 93 -18.7 -3.27525 | opp_overlap 1768964, overlap 1768944 1768961 GGTCGCGAAACGCAA CGCGGGCCG AAAC CGGCCCGCG AGCGGGGGCTTTCTA RPA1590 1769796 - 1769020 - | hypothetical protein RPA1591 1770191 - 1769796 - | hypothetical protein murI 1771039 - 1770245 - | glutamate racemase RPA1593 1771610 - 1771122 - | thioesterase superfamily protein trpB-1 1771765 - 1773129 + | tryptophan synthase subunit beta TERM 1327 1773198 - 1773149 - f 100 -17.2 -3.6715 | gap 1, overlap 1773161 GTAGCCAACCGCAAA GCACTGACCCAACCTCTCCCCGC CCTGT GCGGGGAGAGGCCGGATT-GCGC AGCAATCCGGTGAGG TERM 1328 1773187 - 1773161 - f 93 -19.5 -3.09208 | overlap 1773149 AAAGCACTGACCCAA CCTCTCCCCGC CCTGT GCGGGGAGAGG CCGGATTGCGCAGCA TERM 1329 1773434 - 1773450 + F 78 -2.9 -5.00616 | overlap 1773427 GCTAAGTTCTCTAAC TGCTGCA GTT TGCGTCA TTTTTTGGGGAGCGG TERM 1330 1773881 - 1773897 + G 74 -7.9 -4.26188 | overlap 1773891 GTGGCAAGGGCGGTC CGCTCCG TGG CTGAGCG TTTTGGCTCTGTCGC RPA1595 1773467 - 1774417 + | hypothetical protein RPA1596 1774809 - 1775177 + | tryptophan synthase subunit beta TERM 1331 1775235 - 1775209 - f 93 -19.5 -3.08312 | AAGGCACTGACCCAA CCTCTCCCCGC TCTGT GCGGGGAGAGG TCGGATTGCGCAGCA TERM 1332 1777456 - 1777399 - g 75 -14.2 -3.28712 | gap 3, opp_overlap 1777400, overlap 1777365 1777400 TCTTGCGGTCGAGAA GCGCCACGGCGA-CGTCGTGCGCGGCATG ATC CACGCCG-GCACCGCGACCGCCGTG-CAC GATGTGTCAGATGGC purQ 1775573 - 1777783 + | phosphoribosylformylglycinamidine synthase II RPA1598 1779210 - 1778029 - | peptidyl-prolyl cis-trans isomerase TERM 1333 1778276 - 1778262 - G 74 -7.8 -4.28361 | overlap 1778263 GGAAGCGCAGGAAAA CCGCCA GGA TGGCGA AGATGATCGCGGCGC TERM 1334 1778553 - 1778513 - G 70 -6 -4.24342 | overlap 1778515 GCGCCGATGAAGAAA TACGCGGTGTACAGCAGC ACCCG GCTGGCCTGCACCGCGAA CGGGCCCCATTCGAA TERM 1335 1778792 - 1778767 - G 70 -10.3 -3.67102 | opp_overlap 1778767 1778765 1778768 1778770, overlap 1778761 1778768 CCACAGAAACCACAA CGGTCCGCTCG GCCA CGGGCCGACCG TGATCATGTTCTCGT RPA1599 1779647 - 1779285 - | hypothetical protein RPA1600 1779811 - 1780047 + | BolA-like protein RPA1601 1780646 - 1780122 - | MarR family transcriptional regulator RPA1602 1781319 - 1782041 + | hypothetical protein RPA1603 1783170 - 1782103 - | putative fatty acid desaturase RPA1604 1784507 - 1783527 - | hypothetical protein TERM 1336 1784526 - 1784538 + r 74 -10.5 -3.76641 | CGATCCTCCGGGCCG CGCGC GTG GCGCG TTTAGATGTTCAAAT RPA1605 1785812 - 1784553 - | hypothetical protein TERM 1337 1785110 - 1785137 + g 77 -3.4 -4.93365 | gap 1 GCCGGGCCAGCCTCA CCGGTCCCACC AGCGCGC GGTGC-ACCGG TTTTTCGTTGTCGAA RPA1606 1786040 - 1786423 + | hypothetical protein TERM 1338 1786585 - 1786605 + G 70 -13.3 -3.01712 | opp_overlap 1786598 GGTCCTGAGCTGCTC GCCGAGTGT GAA ACGCTCGGC TGTTGCGAAACCGGC RPA1607 1786420 - 1786962 + | Appr-1''-p processing enzyme family protein RPA1608 1787022 - 1788302 + | beta-lactamase mdlC 1789941 - 1788313 - | benzoylformate decarboxylase TERM 1339 1790157 - 1790209 + r 77 -12.9 -3.55444 | gap 3, overlap 1790157 1790181 1790181 CCCCCTCACCCGACC G-GCTACGCCGGTCGACCTCTCCCCG CGCG CGGGGAGAGGTTAA-CG-CGTGGCGC TTTACCAGCTCGCCG RPA1610 1791068 - 1790211 - | hypothetical protein TERM 1340 1790645 - 1790668 + g 73 -14.6 -2.86164 | opp_overlap 1790627 CCTGGCGGTCGCGGA TCGCCACGCC GCGG GGCGTGGTGA TCTCATGATTGACGG RPA1611 1792175 - 1791081 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1341 1792219 - 1792264 + r 87 -16.9 -2.94416 | gap 1 AGCGCGGCATCATTG TCGTCATTCCGGG-GCGCGAGC GAA GCTCGCGAACCCGGAATCTCGA TATGTCGTGCCCATG TERM 1342 1792340 - 1792289 - R 91 -18 -3.14931 | gap 1, opp_overlap 1792292 CCCATGCCGGATCAA CAGCTCGGGATTCCGGGTTCGCCGC TAC GCGGCGC-CCCGGAATGACGAGTTG ATGTTACCGGGTGCA TERM 1343 1792292 - 1792337 + r 93 -18.3 -3.36452 | gap 1, opp_overlap 1792289 ATGCCGGATCAACAG CTCGGGATTCCGGGTTCGCCGC TAC GCGGCGC-CCCGGAATGACGAG TTGATGTTACCGGGT RPA1612 1793548 - 1792376 - | putative acyl-CoA dehydrogenase RPA1613 1794847 - 1793582 - | cytochrome P450 TERM 1344 1794797 - 1794820 + g 70 -5.9 -4.1721 | gap 1 CGCATAGGCTTCCTC GC-GCGCCGC CCGCA GCCGCGCAGC TTTTCCGGTCTCGAT ivd2 1795195 - 1796367 + | isovaleryl-CoA dehydrogenase TERM 1345 1796381 - 1796407 + F 91 -16.6 -3.63627 | overlap 1796382 GAGGCGTCACGCGTT TCAAGGGCGCCA TCT TGGCGCCCTTGC TTTGACATCTGCGGC TERM 1346 1796382 - 1796406 + F 90 -20.1 -2.77962 | overlap 1796381 AGGCGTCACGCGTTT CAAGGGCGCCA TCT TGGCGCCCTTG CTTTGACATCTGCGG TERM 1347 1797206 - 1797218 + G 77 -5.5 -4.62302 | overlap 1797204 1797203 CGTCGCGGACACCCG GGTCG CCC CGATC TTTTTGCACGTCTTG RPA1615 1796463 - 1797257 + | putative methyltransferase RPA1616 1798060 - 1797254 - | hypothetical protein TERM 1348 1797672 - 1797710 + g 73 -12.5 -3.37796 | gap 1 TTGCCGAGGTTGCGA TCGCGGACGAGGTGGACG GTGA CGTTGGCCTCGTCCG-GA TTGTCGGTCATCGCG RPA1617 1798728 - 1798147 - | ErfK/YbiS/YcfS/YnhG TERM 1349 1798824 - 1798773 - H 71 -13.5 -2.58579 | opp_overlap 1798806, overlap 1798772 CGAACTGGCCATAAT CGCGGCGATTGCGCAAGCCGGCG GCTGTA CGTCGGCGCACGCGTTCGCCGCA GTCCTGCCGCGCGCC ilvX 1798909 - 1800453 + | hypothetical protein TERM 1350 1800448 - 1800487 + F 70 -10.6 -3.56099 | gap 1, opp_overlap 1800454, overlap 1800449 CTGATCGCGGTGCAG ATGTAATGCCACGGGCGGC CCT GCCGCCCG-GGCGTTCCCG TTTCGGACAGTTGTC TERM 1351 1800449 - 1800486 + F 72 -14.1 -2.73338 | gap 1, opp_overlap 1800454, overlap 1800448 TGATCGCGGTGCAGA TGTAATGCCACGGGCGGC CCT GCCGCCCG-GGCGTTCCC GTTTCGGACAGTTGT TERM 1352 1800481 - 1800454 - f 80 -14.8 -3.12351 | gap 1, opp_overlap 1800449 1800448 GCGGTGCAGATGTAA TGCCACGGGCGGC CCT GCCGCCCG-GGCG TTCCCGTTTCGGACA RPA1619 1800509 - 1800997 + | hypothetical protein TERM 1353 1801145 - 1801089 - T 88 -16.4 -3.31792 | gap 1, opp_overlap 1801120, overlap 1801091 TGACGAGCGCCACAA TAGGCGCAGCACG-ACGAGACGGCGCG TGCC CGCGCCGTCCCGCACGATCCGCGCCGG CGATGTCCTTTGGCT TERM 1354 1801143 - 1801091 - T 100 -23.4 -3.22653 | gap 1, opp_overlap 1801120, overlap 1801089 ACGAGCGCCACAATA GGCGCAGCACG-ACGAGACGGCGCG TGCC CGCGCCGTCCCGCACGATCCGCGCC GGCGATGTCCTTTGG RPA1620 1801480 - 1801160 - | hypothetical protein RPA1621 1801680 - 1802552 + | hypothetical protein RPA1622 1803986 - 1802706 - | hypothetical protein RPA1623 1804879 - 1804226 - | hypothetical protein TERM 1355 1805362 - 1805346 - g 80 -9.4 -4.26076 | CGACCGCGAGGAAAA CCGCGA CGCCT TCGCGG CCAATCCGGAGCGTT RPA1624 1804927 - 1805433 + | hypothetical protein cysQ 1806269 - 1805442 - | putative CysQ protein TERM 1356 1806293 - 1806314 + H 70 -10.1 -3.66784 | overlap 1806286 1806289 1806294 GTCATCCTCGGTCGG TGGTCCGGT TTGT GCCGGACCG TTGTGTTGGCACTGC RPA1626 1806403 - 1807059 + | hypothetical protein TERM 1357 1807950 - 1807928 - g 70 -11.2 -3.55622 | overlap 1807929 GCCAAGCCCGCCAAA CCCGCCGCCA AGC CGGCGGCGAA GAAGTCCGGCGGCGA cheA2 1807250 - 1810063 + | chemotaxis histidine kinase CheA cheW2 1810060 - 1810560 + | chemotaxis signal transduction/oligomerization protein CheW2 cheY2 1810628 - 1810993 + | chemotaxis response regulator, CheY2 cheB2 1811072 - 1812247 + | chemotaxis-specific methylesterase TERM 1358 1812854 - 1812892 + G 73 -6.1 -4.41348 | gap 1 ACGACTTCTCGTCGC TCGGCACGTT-CGACA TCGTGTTC TGCCGCAACGTGCTGA TTTATTTCGACCAGA cheR2 1812244 - 1813122 + | chemotaxis methyltransferase, CheR2 TERM 1359 1813168 - 1813218 + T 71 -11.2 -3.40403 | opp_overlap 1813168 1813167 1813195 ATCATTGCCAACAAC CCTTCGTCATTCCGAGG-CGCGAG AGCAG CTCGCGACCCCGGGATC-CGGAGG TTGTCGTGCAAGGCG TERM 1360 1813360 - 1813341 - T 100 -12.8 -5.61881 | TCCGAAAAACAAAAA CCCCGCCA TTTG CGGCGGGG TCAAGGACCACTCGG ctrA 1814114 - 1813413 - | two-component cell cycle transcriptional regulatorCtrA fliI 1814482 - 1815807 + | flagellum-specific ATP synthase TERM 1361 1816234 - 1816220 - g 70 -6.4 -4.30177 | GACGAGATGAAGAAA GTCGAA TTG CTCGAC GAGCGCGACCAGGCT TERM 1362 1816316 - 1816269 - g 77 -12.1 -3.73072 | AACGCGCCGAGGAAA GTGCCCGCGAACAGGCCGAC-CT CGAC AGCATCGGCCTGAT-GCGTGCAC GGCTCGGTGGGGCTG RPA1634 1815917 - 1816345 + | flagellar export FliJ TERM 1363 1816393 - 1816369 - f 71 -11.3 -3.53563 | opp_overlap 1816371, overlap 1816371 AGATTTGCGTCGAAA CAGCCCGGGCC CTC GGTCCGGGCTT TCGTTTGCGGTATCC TERM 1364 1816371 - 1816391 + F 100 -16.1 -4.07647 | opp_overlap 1816371 1816369 ATTTGCGTCGAAACA GCCCGGGCC CTC GGTCCGGGC TTTCGTTTGCGGTAT TERM 1365 1816391 - 1816371 - f 77 -13.9 -3.34517 | opp_overlap 1816371, overlap 1816369 ATTTGCGTCGAAACA GCCCGGGCC CTC GGTCCGGGC TTTCGTTTGCGGTAT RPA1635 1816522 - 1817070 + | RNA polymerase ECF-type sigma factor RPA1636 1817070 - 1818017 + | hypothetical protein TERM 1366 1818132 - 1818092 - T 74 -14.9 -2.57795 | opp_overlap 1818097 1818103, overlap 1818097 1818103 CTCATCATCAACGCA CAAAAGAAAAACGCCCG TGGGGAG CGGGCGTTTTCCTTTGG GTCTCCACCTGGGGT TERM 1367 1818127 - 1818097 - T 100 -13.4 -4.48221 | opp_overlap 1818097 1818103, overlap 1818092 1818103 CATCAACGCACAAAA GAAAAACGCCCG TGGGGAG CGGGCGTTTTCC TTTGGGTCTCCACCT TERM 1368 1818097 - 1818127 + T 78 -11.9 -3.7108 | opp_overlap 1818097 1818092 1818103, overlap 1818103 CATCAACGCACAAAA GAAAAACGCCCGT GGGGA GCGGGCGTTTTCC TTTGGGTCTCCACCT TERM 1369 1818121 - 1818103 - T 100 -8.8 -5.54907 | opp_overlap 1818097 1818103, overlap 1818097 1818092 CGCACAAAAGAAAAA CGCCCG TGGGGAG CGGGCG TTTTCCTTTGGGTCT TERM 1370 1818103 - 1818121 + T 91 -9.5 -4.57516 | opp_overlap 1818103 1818097 1818092, overlap 1818097 CGCACAAAAGAAAAA CGCCCGT GGGGA GCGGGCG TTTTCCTTTGGGTCT RPA1637 1818415 - 1818215 - | hypothetical protein flhA 1820879 - 1818747 - | flagellar biosynthesis protein FlhA RPA1639 1821142 - 1822386 + | major facilitator superfamily MFS_1 TERM 1371 1822417 - 1822446 + T 84 -16.4 -3.01712 | opp_overlap 1822418, overlap 1822420 GCTCACCAGAACGAA AGAGCCGCGCGG CTGACA CCGCGCGGCTCG TGTTCACAAGGCGAG TERM 1372 1822445 - 1822418 - T 100 -20.6 -4.02108 | opp_overlap 1822417 1822420 CTCACCAGAACGAAA GAGCCGCGCGGC TGAC ACCGCGCGGCTC GTGTTCACAAGGCGA TERM 1373 1822420 - 1822443 + T 81 -16.7 -2.73875 | opp_overlap 1822418, overlap 1822417 CACCAGAACGAAAGA GCCGCGCGG CTGACA CCGCGCGGC TCGTGTTCACAAGGC RPA1640 1824169 - 1822478 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 1374 1823297 - 1823331 + g 73 -3.5 -4.66938 | GGAGGCTTCGAATTG TCGGGTCGCGGC-GTCG ATG CGATGGCCACG-CGCGA TTTTGTCTTCGGAAT TERM 1375 1823958 - 1824000 + g 70 -10.6 -3.53012 | gap 1, opp_overlap 1823983 GTGGCTTCGAGCAGA TGCGCGCGCAGCGTGTTGC GATACA GCGCCACGTTG-GTGCGCA TTTCGCCGAGAACGC TERM 1376 1824412 - 1824428 + H 76 -8 -4.30576 | AGTGGACGCTGAGTC CGATCG ATGCA CGATCG TTTTCGTAGTCGCCA RPA1641 1825086 - 1826006 + | AraC family transcriptional regulator TERM 1377 1826352 - 1826333 - f 70 -10.6 -3.58343 | TTCAGCACCGGGAAA GCGGCCGC CTTT GCGGCCTC CGTGCGCTGACAGAA RPA1642 1826387 - 1827901 + | putative diguanylate cyclase (GGDEF) RPA1643 1828098 - 1828964 + | high affinity iron permease FTR1 RPA1644 1829704 - 1828955 - | hypothetical protein RPA1645 1829921 - 1829694 - | hypothetical protein TERM 1378 1829830 - 1829887 + g 82 -12 -4.09511 | gap 1, overlap 1829831 TTGCACTGGTTGTGC GCGCCGCCGTCCTCTTCGGAGACGATC TCGAT GGCCGTCTTC-AACAGGGCGGTGGCGA TTTTGCGGACGTCTT TERM 1379 1829831 - 1829886 + g 77 -15.5 -3.05224 | gap 1, overlap 1829830 TGCACTGGTTGTGCG CGCCGCCGTCCTCTTCGGAGACGATC TCGAT GGCCGTCTTC-AACAGGGCGGTGGCG ATTTTGCGGACGTCT RPA1646 1830289 - 1830020 - | hypothetical protein RPA1647 1831367 - 1830366 - | alpha/beta hydrolase fold RPA1648 1831520 - 1832782 + | membrane permeases, cation efflux pumps RPA1649 1832779 - 1834005 + | hypothetical protein TERM 1380 1834401 - 1834372 - g 70 -6.3 -4.18018 | gap 1, overlap 1834373 CGCCGCGATGGAAAA GCG-CGCGGACGAA CTG CTCGACCGCGTCGG CCTCAGCCGCTGGCG RPA1650 1833998 - 1834678 + | ABC transporter ATP-binding protein TERM 1381 1834759 - 1834722 - T 82 -11.2 -4.08945 | overlap 1834723 AGCATCGTCCCAAAA GCTGATGCGCGGGCCC GCTTCA GAACCCGCGCATCCGT CAATCGCTGCAGTGC TERM 1382 1834758 - 1834723 - T 78 -14.7 -3.05046 | overlap 1834722 GCATCGTCCCAAAAG CTGATGCGCGGGCCC GCTTCA GAACCCGCGCATCCG TCAATCGCTGCAGTG RPA1651 1835995 - 1834778 - | leucine/isoleucine/valine-binding protein precursor RPA1652 1836597 - 1837418 + | flagellar basal-body rod protein FlgG RPA1653 1837917 - 1837519 - | hypothetical protein RPA1654 1839065 - 1838052 - | putative oxido-reductase RPA1655 1840434 - 1839226 - | urea/short-chain binding protein of ABC transporter RPA1656 1840537 - 1841232 + | urease accessory protein RPA1657 1842475 - 1841261 - | putative diguanylate cyclase (GGDEF) TERM 1383 1842955 - 1842937 - H 71 -9.5 -3.73534 | overlap 1842925 1842950 GAAGGTCACGAAGAA GGCGACC AAGAA GGCCGCC AAGAAAGCGACGAAG TERM 1384 1843089 - 1843042 - H 78 -11.9 -3.74713 | gap 1, overlap 1843046 CAAAAAGGCTAAGAA GTAACTGCCA-CGGAGGCGCCC CGCGC GGGCGCCTCCGCTGGCCGCCGG CGAGGATCGGCGGCG TERM 1385 1843085 - 1843046 - H 100 -21.5 -3.5456 | gap 1, overlap 1843042 AAGGCTAAGAAGTAA CTGCCA-CGGAGGCGCCC CGCGC GGGCGCCTCCGCTGGCCG CCGGCGAGGATCGGC ptpS 1843254 - 1843616 + | putative 6-pyruvoyl tetrahydropterin synthase RPA1659 1844273 - 1843683 - | hemerythrin HHE cation binding region RPA1660 1847336 - 1844415 - | putative cation transporting P-type ATPase TERM 1386 1847431 - 1847421 - g 81 -8.2 -4.56597 | GCGTCGTGTCAAAAA CGGC TGG GCCG GATCGAAGGGCAGGT RPA1661 1847388 - 1847663 + | hypothetical protein RPA1662 1848374 - 1847694 - | hypothetical protein hpaD 1849333 - 1848482 - | putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase RPA1664 1849903 - 1849361 - | glyoxalase/bleomycin resistance protein/dioxygenase RPA1665 1850361 - 1850059 - | hypothetical protein TERM 1387 1850591 - 1850561 - R 100 -16.3 -4.26076 | gap 1, opp_overlap 1850568, overlap 1850562 1850564 TGAGCTGCATCAAAA CGACAAACGCGCGC CGAA GCGCGCGTTTGT-G TAGCTGGTAAAATTG TERM 1388 1850591 - 1850562 - R 86 -16.5 -3.15324 | opp_overlap 1850568, overlap 1850561 1850564 GAGCTGCATCAAAAC GACAAACGCGCGC CGAA GCGCGCGTTTGTG TAGCTGGTAAAATTG TERM 1389 1850589 - 1850564 - R 93 -19.1 -3.13504 | opp_overlap 1850568, overlap 1850561 1850562 GCTGCATCAAAACGA CAAACGCGCGC CGAA GCGCGCGTTTG TGTAGCTGGTAAAAT TERM 1390 1850568 - 1850585 + r 90 -14.1 -4.07124 | opp_overlap 1850564 1850561 1850562 CATCAAAACGACAAA CGCGCGC CGAA GCGCGCG TTTGTGTAGCTGGTA hemN1 1851965 - 1850616 - | coproporphyrinogen III oxidase bchJ 1852656 - 1851994 - | bacteriochlorophyll 4-vinyl reductase TERM 1391 1852519 - 1852576 + g 73 -13.5 -3.34398 | gap 3, opp_overlap 1852532 1852573 1852575, overlap 1852522 1852568 GACCGGGCGTTCGTC GACCATCACCGAAGGCGGAGCGGCGAGC CAGTC GCTCGCCGC-C-GCCT-CGGAGAAGATC TCTTTCGCGGCCGGC TERM 1392 1852564 - 1852532 - G 72 -13.5 -3.10715 | gap 2, opp_overlap 1852522 1852519 TCGACCATCACCGAA GGCGGAGCGGCGAGC CAGTC GCTCGCCGC-C-GCC TCGGAGAAGATCTCT bchE 1854373 - 1852676 - | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 1393 1853365 - 1853375 + g 70 -8.2 -4.02817 | CGGCTTCGCGGAGCA GGCG GAT CGCC TTCTTGTTGTCGGAG RPA1669 1854959 - 1854531 - | hypothetical protein TERM 1394 1854888 - 1854931 + g 76 -2.3 -4.87786 | gap 2, overlap 1854899 1854900 TCCTGCAATCTCTTC CCACTCTCG-GAC-GACGTCG GCGA CGGCTTCTGTCACGGGCGCGG TTTTTGTCGGCTTGC TERM 1395 1855465 - 1855414 - g 70 -10.2 -3.67022 | gap 3, opp_overlap 1855423, overlap 1855411 GAAAGTACAAATGAA CGCCGAAGCG-G-AGGCCGCG-ATC GAATG GACGCGCGGCCAGCTCGATTCGGCG CAGCGCAAGTTCCTG RPA1670 1855181 - 1855921 + | metallophosphoesterase RPA1671 1855925 - 1857364 + | serine/threonine protein kinase RPA1672 1858060 - 1857410 - | transport-associated protein RPA1673 1858439 - 1860790 + | putative phosphoketolase TERM 1396 1860868 - 1860894 + F 81 -15.2 -3.09492 | opp_overlap 1860867 1860864, overlap 1860873 CAACCACCCAAGCAC CGCAATGCGCCA TCC TGGCGCATTGCC TCTTCGCATTAACCG TERM 1397 1860873 - 1860889 + F 70 -12.3 -3.19293 | opp_overlap 1860867 1860864, overlap 1860868 ACCCAAGCACCGCAA TGCGCCA TCC TGGCGCA TTGCCTCTTCGCATT cheY3 1860968 - 1861471 + | response regulator receiver, CheY3 TERM 1398 1863414 - 1863392 - g 79 -4.7 -4.71426 | overlap 1863393 1863395 CCGCGAGGAAGAAAA GGACGCCGC CCAGC GCACCGCCC TGCAGCGCAAGCTGG TERM 1399 1863836 - 1863863 + G 70 -11.2 -3.62096 | gap 1, opp_overlap 1863834 CGCCACCATCGAAGC GGCGCGGGCCGGC GAA GCCGGTC-GCGGC TTTGCGGTGGTCGCG RPA1675 1862118 - 1864268 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 1400 1865147 - 1865125 - g 70 -11.2 -3.55622 | overlap 1865126 GCCAAGCCCGCCAAA CCCGCCGCCA AGC CGGCGGCGAA GAAGTCCGGCGGCGA cheA3 1864447 - 1867260 + | chemotaxis histidine kinase CheA cheW3 1867257 - 1867757 + | chemotaxis signal transduction/oligomerization protein CheW3 cheR3 1867811 - 1868686 + | chemotaxis methyltransferase, CheR3 RPA1679 1868698 - 1869012 + | hypothetical protein RPA1680 1869241 - 1870491 + | putative response regulator and cylclic diguanylate phosphodiesterase (EAL) RPA1681 1873113 - 1870522 - | sensor histidine kinase TERM 1401 1870571 - 1870587 + g 77 -10.8 -3.85092 | GCGGGCACGCGGCGC GCGGCG CTGAA CGCCGC TTTGATCTGCCTGGT TERM 1402 1873226 - 1873237 + H 76 -7.2 -4.2679 | overlap 1873205 1873208 CGGGGTTTATCCCCG CGGC CTTT GCCG TTTTGATAGCGCTTG RPA1682 1873536 - 1874162 + | two-component LuxR family transcriptional regulator TERM 1403 1874169 - 1874193 + T 88 -14.3 -3.78775 | opp_overlap 1874164 1874163 1874171, overlap 1874189 CCGAAGTAAGCTGAA GACCGGCGG CATCGCA CCGCCGGTC TTTCGTCGTCGGGCG TERM 1404 1874191 - 1874171 - T 73 -12.5 -3.11178 | opp_overlap 1874169 1874189, overlap 1874164 1874163 GAAGTAAGCTGAAGA CCGGCGGCA TCG CACCGCCGG TCTTTCGTCGTCGGG RPA1683 1874995 - 1874213 - | short-chain dehydrogenase/reductase SDR TERM 1405 1874316 - 1874342 + g 74 -5.6 -4.56133 | opp_overlap 1874316, overlap 1874317 GCCGCGCCGAATTCA TCAGGCGTGCCG AAG CGTCCCGCCGGG TTTTCGTTCTTCCGC TERM 1406 1875794 - 1875850 + G 79 -4.4 -4.7373 | gap 2, opp_overlap 1875822 GGCGCCATCCTCCTG CTCGCC-TCGAACG-CATCGCGCTAC ATGACCG GCAGCGTGGTGACGGTGGATGGCGGG TTTTTGCTGGGGTAG RPA1684 1875104 - 1875865 + | short-chain dehydrogenase/reductase SDR TERM 1407 1876525 - 1876505 - g 70 -11.8 -3.40403 | opp_overlap 1876514 GGTGCCGGAGGACAA GGCGGCGA CTCCT CCGCCGCC GGTGGGATCGGCGGC TERM 1408 1876758 - 1876708 - g 76 -14.7 -3.18735 | gap 2 GCAAGACGGCAGCAA TGGCACGACGGCGGCCTCCCCCAGC GGA GGTGGAGGAGGC-GCCGGCG-GCAA CAATGGCAACGTGGC RPA1685 1876349 - 1880449 + | serine protease/outer membrane autotransporter RPA1686 1882206 - 1880602 - | glucose-methanol-choline oxidoreductase TERM 1409 1882182 - 1882141 - G 80 -15.7 -3.28712 | GGTGTCTTCCGACAA GCGACCGGCGACGGCGCAG CCGC CGGAGCCGCCGCCGACCAC GACGAAATCCACTGT RPA1687 1883710 - 1882277 - | aldehyde dehydrogenase TERM 1410 1884105 - 1884121 + H 100 -15.1 -4.85129 | opp_overlap 1884105 CAGATCAGTGATTAA GCCCGCC TCT GGCGGGC TTTTTCGTGTCTCGT TERM 1411 1884121 - 1884105 - H 83 -15.1 -3.1994 | opp_overlap 1884105 CAGATCAGTGATTAA GCCCGCC TCT GGCGGGC TTTTTCGTGTCTCGT RPA1688 1884296 - 1884817 + | GCN5-related N-acetyltransferase TERM 1412 1886236 - 1886273 + G 77 -13.3 -3.53811 | gap 1, overlap 1886240 CACGTCCACTTCATC GACGGGGCGGGCGGGGGC TAT GCGTCCGCC-GCCCTGGC TTTGAAGGCGATGCC RPA1689 1885144 - 1886307 + | hypothetical protein RPA1690 1886744 - 1886304 - | hypothetical protein matE3 1888249 - 1886876 - | cation efflux pump (multidrug resistance protein) RPA1692 1888524 - 1889759 + | major facilitator transporter TERM 1413 1889889 - 1889906 + F 76 -6.9 -4.4017 | GTTAGAATAGATATT GGGTCCC GCCG GGGAACC TTTTATAAGGGTTCC TERM 1414 1890228 - 1890170 - g 77 -13.1 -3.61398 | gap 1 CCCGTTGTTCAATAA CGCCGCCCAGC-ACTTCAACCACATCCA CTTC TGGAAGTGGATGAAGCCGAACGGCGGCG GCAGCAAGCTGCCGG sodB 1889961 - 1890557 + | superoxide dismutase TERM 1415 1890584 - 1890614 + F 100 -22 -4.13767 | opp_overlap 1890589, overlap 1890589 AGCACGCACGGAAGC GAAAAGGCGGTCGC GGC GCGGCCGCCTTTTC TTTTGGCATCGAGCC TERM 1416 1890609 - 1890589 - f 100 -13.9 -4.28774 | opp_overlap 1890584 1890589 GCACGGAAGCGAAAA GGCGGTCGC GGC GCGGCCGCC TTTTCTTTTGGCATC TERM 1417 1890589 - 1890609 + F 100 -16.1 -5.09259 | opp_overlap 1890589, overlap 1890584 GCACGGAAGCGAAAA GGCGGTCGC GGC GCGGCCGCC TTTTCTTTTGGCATC ccrB 1890635 - 1891084 + | camphor resistance protein CrcB RPA1695 1892007 - 1891147 - | cupin domain-containing protein TERM 1418 1891790 - 1891775 - G 71 -9 -3.78775 | opp_overlap 1891758 GGCGGCACCACGAAA TGACCG CGTT CGGTCA TCATGGCGGTTACAC TERM 1419 1892180 - 1892151 - H 74 -14.3 -2.62184 | opp_overlap 1892173, overlap 1892137 CCGGCGCCCACATCA TTCGCCGAACCCG GATG CGGGCTTGGCGAA GTCAATCTCATGTCG TERM 1420 1892532 - 1892522 - g 81 -5.4 -4.82901 | GCTCGCGGAGAAAAA GGTT CTC AACC ATCTCGACAAGTTTT RPA1696 1892427 - 1893062 + | hypothetical protein RPA1697 1893807 - 1893265 - | competence-damaged protein TERM 1421 1893316 - 1893298 - G 74 -2.3 -4.72986 | gap 1, opp_overlap 1893303, overlap 1893300 CATTCGCAGCAAAAA CGTCAGCG CGGT CGCGG-CG AACACGTGCATGTTC RPA1698 1894614 - 1893871 - | hypothetical protein TERM 1422 1896233 - 1896252 + G 72 -7.2 -4.25283 | overlap 1896234 GACCGGCTGCGCGGG TTGATCGA CCGC TCGATCAG TTTTGGTCGCGACGT RPA1699 1894760 - 1896547 + | putative acyl-CoA dehydrogenase TERM 1423 1896633 - 1896600 - T 73 -8.2 -3.98083 | opp_overlap 1896600 1896604, overlap 1896596 GAGCGAAGCGACAAA GCAATCCAGCGC TGTGCCCGGG GCTCTGGATTGC TTCGCTTCGCTCGCA RPA1700 1898184 - 1896682 - | amidase TERM 1424 1898502 - 1898520 + r 100 -11.7 -4.62441 | opp_overlap 1898502 CTCCCTTGACTTAAA GCTCCGG CGGTT CCGGAGC TTTCTTTATGTCGGG TERM 1425 1898520 - 1898502 - R 75 -11.7 -3.64703 | opp_overlap 1898502 CTCCCTTGACTTAAA GCTCCGG CGGTT CCGGAGC TTTCTTTATGTCGGG RPA1701 1899336 - 1898566 - | hypothetical protein RPA1702 1901087 - 1899531 - | acyl-CoA synthetase TERM 1426 1901184 - 1901172 - R 80 -4.7 -4.93296 | overlap 1901174 GGAGCACGACAAAAA CCGCG CGC CTCGG AGGCCAGCTGGGATT RPA1703 1902541 - 1901366 - | acetyl-CoA acetyltransferase TERM 1427 1901791 - 1901834 + g 74 -5.8 -4.45544 | gap 1 CCACGCCGGAGGCGC CGTCGCAGATCTGGCTGGCGG TCG CCGCC-GTCAGCTTGCCGCCG TTTTCGTTGATCAGC TERM 1428 1903126 - 1903140 + G 72 -11.4 -3.54543 | overlap 1903128 1903131 CTGCTTGCGGAGGGT GTCGCC ACC GGCGAC TTTCGCGAAGTCGAT RPA1704 1902643 - 1903350 + | TetR family transcriptional regulator TERM 1429 1903619 - 1903640 + G 82 -11.5 -4.07568 | ACCTCGAACCGGATC GGTGGCGGC CCAA GCCGCGACC TTTTGCCGGCCACAA RPA1705 1903489 - 1904565 + | 3-hydroxyacyl-CoA dehydrogenase type II TERM 1430 1904575 - 1904606 + F 83 -15.3 -3.12327 | opp_overlap 1904568, overlap 1904573 CGCTAAACGCGCACT TCTCACCCTTTCC GTTTCG GGAGAGGGTGAGA TCTTCGATCTCCGCC TERM 1431 1905087 - 1905142 + G 77 -13.2 -3.61654 | gap 2 TCGTGATGCTGATGC GCCGCTGCCCGCAGCCGATCATCGCG CTGATC CGCGGTGC-C-GCGGCCGGCGGCGGC TTTGCGCTCGCTCTG RPA1706 1904789 - 1905595 + | putative enoyl-CoA hydratase fcs1 1905646 - 1907520 + | acyl-CoA synthetase TERM 1432 1908202 - 1908223 + G 77 -10.1 -3.98661 | overlap 1908204 CACCGGCAACAGCGG CCGCGAGAC TGAT GTCTCGCTG TTTCTGGTCGATCTC TERM 1433 1908204 - 1908221 + G 70 -11.3 -3.5812 | overlap 1908202 CCGGCAACAGCGGCC GCGAGAC TGAT GTCTCGC TGTTTCTGGTCGATC RPA1708 1907687 - 1908814 + | putative acyl-CoA dehydrogenase TERM 1434 1909990 - 1910035 + G 72 -11.7 -3.5393 | gap 1 TCGATCTGCAGGGCG CCGCCGGCGTGCTCAGCGGGCC GGA GGAT-GCTGAGGTCGCCGGCCG TTTCCAGGCGATGCT RPA1709 1908951 - 1910198 + | putative acyl-CoA dehydrogenase TERM 1435 1910314 - 1910274 - f 77 -12.5 -3.66732 | TAATGAGCCGAATAA CTCATGGTTCGAGACGCGC GAT GCGCGCTCCTCACCATGAG GGCCGAGACAAGAAC TERM 1436 1910502 - 1910480 - g 70 -9.8 -3.63991 | overlap 1910481 CATCAGCCTGAAGAA CGCCGACATC GTC GAGGTCGGCA AGGCGTGGCAGAAGA RPA1710 1910349 - 1911593 + | putative acyl-CoA dehydrogenase pnbA 1911756 - 1912454 + | nitroreductase RPA1712 1913638 - 1912856 - | enoyl-CoA hydratase/isomerase RPA1713 1913941 - 1914615 + | cyclic nucleotide-binding domain-containing protein RPA1714 1914669 - 1915511 + | hypothetical protein RPA1715 1915666 - 1916166 + | hypothetical protein RPA1716 1916440 - 1918650 + | putative diguanylate cyclase (GGDEF) RPA1717 1919243 - 1918857 - | hypothetical protein TERM 1437 1919779 - 1919759 - g 72 -6.7 -4.25104 | overlap 1919760 TCTGGCCCATGAAAA GCGCTCGCC GCG GGTGAGCGG TTACACGCAGCGCAA RPA1718 1919490 - 1919897 + | hypothetical protein RPA1719 1920236 - 1919904 - | hypothetical protein RPA1720 1920920 - 1920300 - | hypothetical protein RPA1721 1921022 - 1921939 + | LysR family transcriptional regulator TERM 1438 1922383 - 1922401 + G 84 -6.7 -4.74103 | gap 1 CCGATCGTATCGGTG TCGCTCGG TCTG CCG-GCGA TTTTTCAGTTCGGCG alkB 1921936 - 1922586 + | alkylated DNA repair protein paaK 1923924 - 1922593 - | phenylacetyl-CoA ligase TERM 1439 1923828 - 1923883 + g 75 -13.2 -3.35679 | gap 1, overlap 1923794 AAGCGAGGCGCTTGG TCTGCAGCGCGACGATCTCGTCGCGCG AGG CGCGCT-CGGCGTCGTCGAGCTCCGGA TTGTAAGTGCCCGGC paaI 1924412 - 1923939 - | putative phenylacetic acid degredation protein TERM 1440 1925249 - 1925289 + G 73 -11 -3.72695 | opp_overlap 1925229, overlap 1925242 1925250 GAGTCGAAGCTGCTG CCGCAAGGCGCGCTGCAG CTCGT CTGCGGCGGGCTTGGCGA TTTGCTGGACCACCT TERM 1441 1925250 - 1925288 + G 73 -14.5 -2.83403 | opp_overlap 1925229, overlap 1925242 1925249 AGTCGAAGCTGCTGC CGCAAGGCGCGCTGCAG CTCGT CTGCGGCGGGCTTGGCG ATTTGCTGGACCACC TERM 1442 1926080 - 1926036 - g 73 -15.6 -2.52543 | gap 1 ATGCGGCGGAATCCA CCGGCCACGGCACGCCGCTGC CGGC GCTGCTGCATGGCG-GGCCGG GCCGCGCCGGTGGCG RPA1725 1924637 - 1926676 + | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase TERM 1443 1926815 - 1926799 - g 70 -6.5 -4.1891 | overlap 1926800 CGCCTGCAAGACAAA GCCGC CGATGTC GCGGC GATCACGCCGGTCCT RPA1726 1926733 - 1927749 + | putative oxidoreductase RPA1727 1927991 - 1928728 + | hypothetical protein RPA1728 1933506 - 1929247 - | hypothetical protein TERM 1444 1929924 - 1929954 + g 88 -14.7 -3.90588 | opp_overlap 1929908 1929925, overlap 1929925 GCCGGTAGGAGACCA ACCCTGGGTCGGC ATTCA GCCGATCCAGGGC TTTGGTTGCGGCCTC TERM 1445 1929925 - 1929953 + g 86 -18.2 -2.94032 | opp_overlap 1929908 1929925, overlap 1929924 CCGGTAGGAGACCAA CCCTGGGTCGGC ATTCA GCCGATCCAGGG CTTTGGTTGCGGCCT TERM 1446 1929953 - 1929925 - G 80 -16 -3.29471 | opp_overlap 1929924 1929925, overlap 1929908 CCGGTAGGAGACCAA CCCTGGGTCGGC ATTCA GCCGATCCAGGG CTTTGGTTGCGGCCT TERM 1447 1933217 - 1933195 - G 70 -12 -3.39668 | opp_overlap 1933195 1933194, overlap 1933187 CGCGAAATCGGAGAA CGGACGATGC TTC GCATCTTCCG CTTTGCTAGGGACGA TERM 1448 1933917 - 1933929 + r 81 -10.5 -4.11692 | CGCCGCTGGTGGGCG CGCCG TAA CGGCG TTTTCGCGATGGATC RPA1729 1935210 - 1934248 - | fatty acid desaturase family proteiin RPA1730 1936486 - 1935263 - | OsmC-like protein TERM 1449 1936506 - 1936548 + r 71 -13.7 -2.6574 | AGGCCTCCATGTTGT TGTCATTCCGGA-TTGCGAGC GAA GCTCGCAAGTCCGGAATC-CA TACTCTCCGTCCTTG RPA1731 1937330 - 1936665 - | molybdopterin oxidoreductase TERM 1450 1937220 - 1937255 + g 71 -9.7 -3.80625 | gap 1, opp_overlap 1937200, overlap 1937221 GCCCGGCGGCAGCCG CTGCTCATCCGGCCGG ACATG CCGGCCGG-TGAGAAA TTTGCCTTCTGCCGC RPA1732 1938552 - 1937353 - | cytochrome P450 TERM 1451 1937402 - 1937421 + g 77 -3.5 -4.83615 | CGCGGGCCCCGGACT GTGCCCT CCGACC AGCGCAC TTTTTGTGACGGGTC fdxA 1938848 - 1938621 - | putative ferredoxin RPA1734 1940381 - 1938948 - | putative amidotransferase, subunit A bglA 1943021 - 1941645 - | putative beta-glucosidase TERM 1452 1941890 - 1941870 - G 72 -13.3 -3.14564 | GTAGTCGCGCAGGAA GCCGATCCG GCC CGGATCGAC CACTTCGCCGTTGGC TERM 1453 1943059 - 1943077 + r 73 -13.1 -3.19192 | GTCATTTGATACGCC GCGGCGC AGACG GCGCCGC TTGCGTTGAATCAAA RPA1737 1943986 - 1943207 - | short chain dehydrogenase TERM 1454 1943293 - 1943342 + g 86 -8.3 -4.84359 | CGGAGGCCAGATAGG CCATCAGGTCGGCGATCTCGCGC GGTT GCGCGGGGCGGCCGAGTGGAAGG TTTTTCTGCAGCTCA RPA1738 1945513 - 1944029 - | putative branched-chain amino acid transport system ATPase RPA1739 1946436 - 1945513 - | putative branched-chain amino acid transport system permease protein TERM 1455 1945672 - 1945654 - G 75 -13.8 -3.23216 | GGCGACGATCAGGAA CACGGCGC CCA GCGCCGCG CCGATCACGGTCCGC RPA1740 1947313 - 1946438 - | branched chain amino acid ABC transporter permease TERM 1456 1947338 - 1947393 + r 82 -14.6 -3.36492 | gap 1, opp_overlap 1947336 1947337 TCAGTTGGCCAAATC CGGGACGTCATTCCGGG-ATGCGCGCC GCC GGCGCGCAGACCCGGAATCCCGAGCTG TTCTGAGATTCCGGG TERM 1457 1947471 - 1947496 + r 88 -16.9 -3.05596 | opp_overlap 1947471 CAGCCGGACGAAAAA TGCTCCCGTCG TTGG CGGCGGGAGCA TTCGCTGAAGCGGTC TERM 1458 1947496 - 1947471 - R 100 -14.7 -4.72986 | opp_overlap 1947471 CAGCCGGACGAAAAA TGCTCCCGTCG TTGG CGGCGGGAGCA TTCGCTGAAGCGGTC RPA1741 1948760 - 1947510 - | branched chain amino-acid ABC transporter substrate-binding protein yeaU 1948929 - 1950047 + | putative tartrate dehydrogenase RPA1743 1950920 - 1950081 - | hypothetical protein serA 1951975 - 1951061 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding RPA1745 1953260 - 1952010 - | allantoate amidohydrolase RPA1746 1954280 - 1953330 - | LysR family transcriptional regulator RPA1747 1954396 - 1955214 + | hypothetical protein TERM 1459 1955303 - 1955321 + G 83 -13.1 -3.76492 | opp_overlap 1955284 GTAACCTCGTTCTCG GCGGCGC GGCCA GCGCCGC TTTGCTGCCGTTCGC RPA1748 1955272 - 1956519 + | putative branched-chain amino acid transport system substrate-binding protein TERM 1460 1956556 - 1956535 - f 100 -17.3 -4.30014 | opp_overlap 1956535 CGCAGGAAGTTAAAA CGGGCGCAC CATG GTGCGCCCG TTTGTGTGAGGGGCG TERM 1461 1956535 - 1956556 + F 100 -17.3 -4.03234 | opp_overlap 1956535 CGCAGGAAGTTAAAA CGGGCGCAC CATG GTGCGCCCG TTTGTGTGAGGGGCG TERM 1462 1956834 - 1956872 + G 86 -18.1 -3.02144 | overlap 1956838 1956840 TCTTCGCGATCGATC CGATCCTCGCCGCTCCG CTCGT CGGGGCGGCGATGTTCG TGTTCGGCGCGGTGA TERM 1463 1956838 - 1956868 + G 85 -16.1 -3.36273 | overlap 1956834 1956840 CGCGATCGATCCGAT CCTCGCCGCTCCG CTCGT CGGGGCGGCGATG TTCGTGTTCGGCGCG TERM 1464 1956840 - 1956866 + G 86 -17.3 -3.25073 | overlap 1956838 1956834 CGATCGATCCGATCC TCGCCGCTCCG CTCGT CGGGGCGGCGA TGTTCGTGTTCGGCG RPA1749 1956692 - 1957525 + | inner-membrane translocator RPA1750 1957525 - 1958511 + | inner-membrane translocator RPA1751 1958508 - 1959242 + | branched chain amino acid ABC transporter ATP-binding protein RPA1752 1959226 - 1959930 + | branched chain amino acid ABC transporter ATP-binding protein TERM 1465 1960054 - 1960002 - f 74 -9.3 -3.84514 | gap 3, opp_overlap 1960010, overlap 1960006 ATTGCAAGGAGCAAA GCGACGAAGCAATCCAGAAGTCCCCG TGCA CCGGG-C--CTGGATTGCTTCGCTGC GCTCGCAATGACGGA TERM 1466 1960175 - 1960222 + G 73 -6.2 -4.35044 | gap 1, overlap 1960166 1960165 ACCGAGCACGCCTTT CTCGACCGC-TTTGATGCGGCGC GGG GGGCGGGATTTGATGCGGTCGAG TTTCTGTTTCCCTAC TERM 1467 1960441 - 1960480 + G 72 -12 -3.56568 | gap 1, overlap 1960442 1960453 GCTACATCTGCTGGC GGGCAATGCCGACCGCCGC GAC GCGGCGG-CGGCGCTGGCG TTTCGGCGGTCCTTG TERM 1468 1960442 - 1960479 + G 75 -15.5 -2.73619 | gap 1, overlap 1960441 1960453 CTACATCTGCTGGCG GGCAATGCCGACCGCCGC GAC GCGGCGG-CGGCGCTGGC GTTTCGGCGGTCCTT TERM 1469 1960571 - 1960555 - g 71 -9.3 -3.767 | opp_overlap 1960555 1960554 1960551 GATCGAGCCACTAAA CCGGCGC GAC GCGCCCG GCTATTTCCTCGACG RPA1753 1960124 - 1960903 + | hypothetical protein TERM 1470 1964284 - 1964260 - g 72 -5.8 -4.30987 | gap 2, overlap 1964262 1964263 ATGGTTCACAAGAAA CA-GC-CGGCAT CCA ATGCCGAGCCTG CTCCGGAGATCTCGC ragC 1961116 - 1964310 + | putative cation efflux system protein ragD 1964300 - 1965502 + | cation efflux pump HlyD RPA1756 1967184 - 1965670 - | acetyl-CoA acetyltransferase TERM 1471 1966804 - 1966846 + g 84 -13.3 -3.90112 | opp_overlap 1966836 1966839 GGCCCGCGCAGCTTT GGTCGCCGTCGACTGCGCC TCGGC GCCACAGACTACGGCGACC TTTGCTTCGCCGCGG RPA1757 1968003 - 1967224 - | oxoacyl carrier protein reductase TERM 1472 1968901 - 1968932 + G 73 -13.8 -3.14211 | gap 1, overlap 1968904 AGCGTGTCGCCGGCT CG-ACCGACGACTTC AAG GAAGGCGTCGGTGCG TTCCTCGAAAAGCGT RPA1758 1968171 - 1968971 + | enoyl-CoA hydratase TERM 1473 1969040 - 1969098 + G 72 -13.1 -3.21099 | gap 1, overlap 1969033 1968996 GATGGTGCGCTGGCG CGACCGGCATTCGTGATCTCGCGCAGCT CTCG GGCGGCGCGAG-TCAGGAGACCTGGTCG TTCGTGATCGAGCAG RPA1759 1968979 - 1969974 + | tyrosine protein kinase:aminoglycoside phosphotransferase RPA1760 1969993 - 1970367 + | hypothetical protein RPA1761 1971478 - 1970699 - | enoyl-CoA hydratase TERM 1474 1971468 - 1971488 + g 89 -3.1 -5.26875 | overlap 1971473 GTCACGGTGGAAAAT TGCAGCGCC ATC GGCGTTTCC TTTTTTCGTTGAGCA TERM 1475 1971473 - 1971483 + g 81 -8.2 -4.46531 | overlap 1971468 GGTGGAAAATTGCAG CGCC ATC GGCG TTTCCTTTTTTCGTT TERM 1476 1972038 - 1972011 - g 73 -10.6 -3.65812 | CTCGCCCGAACAGAA GGCGATGATCGA CGGT TCGATCACCGGC AAGTACCGCATCACG TERM 1477 1972126 - 1972103 - g 73 -10.9 -3.71873 | CCACGCACATGGAAA CGCGCGCCG AAGAAG CGGTGCGCG ACGGCAAGAAGGGCT TERM 1478 1972191 - 1972163 - g 72 -5.2 -4.4017 | gap 1, overlap 1972164 TCAACGGCGAGAAAA TGTGGACGACGGG GATG CACGTCG-CCACG CATTGCGCGCTGTTC TERM 1479 1972423 - 1972464 + G 70 -3.5 -4.52589 | gap 1, opp_overlap 1972425, overlap 1972425 1972445 TGCTTCGTGCATGAG AACCGCATCCGCCAAGCAGC CTC GTCGCTCGGCGCG-GCGGTA TTTTGTATCAACGAG RPA1762 1971547 - 1972878 + | putative acyl-CoA dehydrogenase TERM 1480 1972898 - 1972947 + T 80 -14.4 -3.17229 | gap 3, opp_overlap 1972874, overlap 1972897 AGACGGCTGCCTCTC GC-CGGTCATTCCGGG-GCACGCGC GAA GCGCGTGAACCCGGAATC-CCGAGC TGTTGATCGTCGGGT TERM 1481 1972970 - 1973013 + T 78 -10.2 -4.05788 | gap 1 CGTCGGGTGTGCCAC CTCGAGATTCC-GGGTTCGCG CTA CGCGTGCCCCGGAATGACGGG TTTGGTTTAGCGCGC RPA1763 1974828 - 1973251 - | acyl-CoA synthetase TERM 1482 1975079 - 1975107 + r 78 -11.6 -3.70149 | opp_overlap 1975059 CCGGCCTTACGGCCG GCCACCCTCCCC GCAAG GGGGAGGGAAGC TTTGGCTCGTGTCCA RPA1764 1976037 - 1975165 - | short-chain dehydrogenase/reductase SDR RPA1765 1976145 - 1976957 + | enoyl-CoA hydratase TERM 1483 1977026 - 1976979 - f 72 -13.4 -2.80821 | gap 1, opp_overlap 1976985 1976990, overlap 1976976 1976974 GCGGCAAATACATGA CTTAT-CGAGGGGACGCCGCGCG CAT CGCGCGGCGTCTTCGCTTATAAG CGTCGCATCAACGCG TERM 1484 1976985 - 1977019 + F 100 -21.4 -3.31263 | opp_overlap 1976979 1976976 1976974, overlap 1976990 AATACATGACTTATC GAGGGGACGCCGCGCG CAT CGCGCGGCGTCTTCGC TTATAAGCGTCGCAT TERM 1485 1976990 - 1977014 + F 100 -22.9 -3.23452 | opp_overlap 1976979 1976976 1976974, overlap 1976985 ATGACTTATCGAGGG GACGCCGCGCG CAT CGCGCGGCGTC TTCGCTTATAAGCGT RPA1766 1977106 - 1978650 + | acyl-CoA synthetase RPA1767 1980956 - 1978647 - | sensor histidine kinase/response regulator TERM 1486 1980214 - 1980232 + g 73 -13.8 -3.21395 | overlap 1980212 1980215 TCGAAGATCTCCTTC TCGCGGCG GAG CGCCGCGG TCTTCTCGCGCGACT TERM 1487 1980215 - 1980231 + g 71 -15.1 -2.52623 | overlap 1980214 1980212 CGAAGATCTCCTTCT CGCGGCG GAG CGCCGCG GTCTTCTCGCGCGAC RPA1768 1981402 - 1981208 - | hypothetical protein RPA1769 1982498 - 1981608 - | LysR family transcriptional regulator TERM 1488 1982373 - 1982411 + g 76 -14.5 -3.07994 | gap 1, opp_overlap 1982360 CAGCTTCACGCCGTG ACGCGCTTCCAGCGCGGC GATC GCCGCGCTGGTGGC-CGA TTGGGTGAGGTTCAG RPA1770 1983559 - 1982495 - | hypothetical protein TERM 1489 1984020 - 1984063 + G 70 -3.9 -4.52345 | gap 3 CATCGGCCTCGTTTG CGTGGTG-TCGCGCTG-GCGTG AGG CGCGCGCGGT-CGATCAGCACG TTTATTTGGTGGTGT TERM 1490 1984521 - 1984475 - g 70 -9.9 -3.74693 | CGTCACTGTATGAAA CGCCGGTGACCACGCCGATGC CGGTC GCTCCGCCGCCGGCACCGACG CCCACAGCTGCCGAA RPA1771 1983838 - 1984620 + | hypothetical protein TERM 1491 1984715 - 1984685 - f 79 -8.2 -4.36914 | opp_overlap 1984684 1984687, overlap 1984687 GTGCGGTGCACAAAA TACTCCAGGATGCC GGT GGTGTCCTGGAGTG CTGTCATGTCGTCGC TERM 1492 1984713 - 1984687 - f 76 -10.8 -3.79419 | opp_overlap 1984684 1984687, overlap 1984685 GCGGTGCACAAAATA CTCCAGGATGCC GGT GGTGTCCTGGAG TGCTGTCATGTCGTC TERM 1493 1984687 - 1984713 + F 78 -15.2 -2.6891 | opp_overlap 1984687 1984685, overlap 1984684 GCGGTGCACAAAATA CTCCAGGATGCC GGT GGTGTCCTGGAG TGCTGTCATGTCGTC ppc 1984721 - 1987531 + | phosphoenolpyruvate carboxylase RPA1773 1987669 - 1987998 + | DMT family permease RPA1774 1988407 - 1989732 + | porin TERM 1494 1989748 - 1989801 + T 80 -16.2 -2.62396 | opp_overlap 1989766, overlap 1989766 CTCCCCCTCCAAGGT GCTTCACCCG-ACGGAAAAGCCCGCC GCGA GGCGGGCTTTTCTGTGCGTG-GAAGG TGCTATGCCGCAGTC TERM 1495 1989783 - 1989766 - T 93 -14.1 -4.1899 | opp_overlap 1989748 1989766 TCACCCGACGGAAAA GCCCGCC GCGA GGCGGGC TTTTCTGTGCGTGGA TERM 1496 1989766 - 1989783 + T 100 -14.1 -4.55287 | opp_overlap 1989766, overlap 1989748 TCACCCGACGGAAAA GCCCGCC GCGA GGCGGGC TTTTCTGTGCGTGGA TERM 1497 1989886 - 1989944 + T 81 -13.7 -3.56092 | gap 1, overlap 1989888 CGATGGCCGGGTGCT CCCCAGCTCCGGATTCCGGGTTCGCGCC TGGC GGCGCGC-CCCGGAATGACGTGCTGGTG TTTAACCGATCGTCG TERM 1498 1989888 - 1989942 + T 82 -14.9 -3.35775 | gap 1, overlap 1989886 ATGGCCGGGTGCTCC CCAGCTCCGGATTCCGGGTTCGCGCC TGGC GGCGCGC-CCCGGAATGACGTGCTGG TGTTTAACCGATCGT RPA1775 1990892 - 1989978 - | putative dehydrogenase TERM 1499 1990887 - 1990901 + g 95 -4.2 -5.52807 | GCCGTCCAGTGCCTT GGCCAT GTG ATGTCC TTTTTGTTTGTTGTT TERM 1500 1990980 - 1991032 + r 76 -10.6 -3.94634 | gap 2, opp_overlap 1990990, overlap 1990984 1991015 ATCCCGAGGTTATGG CGAAGAGAGATTCCGGGTTCGCTCAC TGC GTGAGCGC-CCCGGAATGACGC-TCG TTGTTTACCGTCATG TERM 1501 1991023 - 1990990 - R 84 -16.1 -3.09749 | gap 1, opp_overlap 1990984 1990980 1991015 TATGGCGAAGAGAGA TTCCGGGTTCGCTCAC TGC GTGAGCGC-CCCGGAA TGACGCTCGTTGTTT RPA1776 1992316 - 1991177 - | lipid transfer protein TERM 1502 1991253 - 1991298 + g 83 -14.7 -3.72695 | gap 1 CAGACCGAGATCTTC GCGTTCGGCACCTGTGCGGGCG CGA TGCC-GCGCATCTGCCGGACGC TTTCCTGCAACGCGT RPA1777 1992735 - 1992322 - | hypothetical protein TERM 1503 1993629 - 1993655 + G 85 -10.1 -4.21922 | gap 1, opp_overlap 1993615, overlap 1993629 AGCCGTCGCAATATC G-GGTGCCGCGC GACG GCGCGGTGCCGC TTTCGTTTTCGCTCG RPA1778 1993022 - 1994380 + | amidase TERM 1504 1994510 - 1994543 + G 70 -13.2 -3.03124 | gap 1, opp_overlap 1994494 1994512, overlap 1994512 CGCTGAACTCGAAGC GATCGGCATCG-CGC GGCCG GCGTCGACGCCGATC TATTACCGCGTCGCC RPA1779 1994373 - 1995059 + | hypothetical protein TERM 1505 1995087 - 1995136 + T 72 -12.1 -3.28924 | gap 1, overlap 1995053 1995088 CGCGCCATCACCACC GCTTGTCATTCCGGG-GCACGCGC GAA GCGCGTGAACCCGGAATCCCGAGG TTGTGACGCAAGCTG TERM 1506 1995088 - 1995135 + T 77 -15.6 -2.57211 | gap 1, overlap 1995087 GCGCCATCACCACCG CTTGTCATTCCGGG-GCACGCGC GAA GCGCGTGAACCCGGAATCCCGAG GTTGTGACGCAAGCT RPA1780 1995837 - 1995247 - | phenylacetic acid degradation-related protein phbH 1997207 - 1996035 - | 4-hydroxybenzoate 3-monooxygenase TERM 1507 1996399 - 1996419 + g 74 -7.5 -4.19817 | opp_overlap 1996399 GGCTCGGCGACAAAT GAGCGTAGC GGC GCGATGCTC TTTTCGATCGATGGG RPA1782 1997376 - 1998386 + | TRAP dicarboxylate family transporter DctP subunit TERM 1508 1998645 - 1998669 + G 75 -11.4 -3.72324 | CATGGACCGCTTCAT CGACGCGATC GAGTG GATCGCGGCG TTCTTCGTCGGCATC RPA1783 1998472 - 1999125 + | TRAP dicarboxylate family transporter DctQ subunit RPA1784 1999132 - 2000439 + | TRAP dicarboxylate family transporter DctM subunit RPA1785 2000607 - 2001068 + | hypothetical protein TERM 1509 2002131 - 2002120 - g 75 -7.2 -4.30416 | opp_overlap 2002119 2002120 ACCAGGAAGCCAAAA CGCG GATA CGCG CTTTCCTCGATCACA RPA1786 2001366 - 2002172 + | enoyl-CoA hydratase fcs2 2002181 - 2004079 + | feruloyl-CoA synthase RPA1788 2004318 - 2004737 + | 4-hydroxybenzoyl-CoA thioesterase RPA1789 2004817 - 2005974 + | putative branched-chain amino acid transport system substrate-binding protein TERM 1510 2006014 - 2006036 + F 100 -16.3 -4.72272 | CCTGCGCCTTGTGAA GCCGGCCTC CATGC GAGGCCGGC TTTTTGCTGCGCGGG RPA1790 2006289 - 2007107 + | putative diguanylate cyclase (GGDEF) RPA1791 2007799 - 2007080 - | branched-chain amino acid transport system ATP-binding protein RPA1792 2009568 - 2007796 - | putative branched-chain amino acid transport system ATP-binding protein TERM 1511 2007983 - 2007997 + g 91 -11.4 -4.2349 | overlap 2007969 AGCTGCCGCAGCAGC GCAGCG AGC CGCTGC TTTTCCATGTGGCGC RPA1793 2010614 - 2009574 - | branched-chain amino acid transport system permease protein TERM 1512 2010839 - 2010795 - g 89 -10.6 -4.1899 | gap 2, overlap 2010796 TGACCGCATCGAAAA CCGCCGCCGT-CGCCAAGC-CG ACG CGAGCCGGGCGCAAGGCGCCGG CGGTCGAGACAGCCC TERM 1513 2010888 - 2010927 + G 74 -15 -3.07192 | gap 1 AGATGGGCGAGCTGT CGGAGCTGCTCG-GCTACG CGC TGAAGCGCGCGCAGCTCCG TGTGTTCGAAGACTT TERM 1514 2011189 - 2011166 - g 71 -14.6 -2.61383 | gap 1, overlap 2011165 ATGCTCACCGACAAG GGC-CGCGCCA CGC TGGCGCGCGCC AAGAAGCTGGTGGCG RPA1794 2010746 - 2011297 + | MarR family transcriptional regulator RPA1795 2013261 - 2011435 - | potassium-efflux system protein TERM 1515 2011934 - 2011973 + g 81 -12.7 -3.78775 | gap 1, overlap 2011935 ATTACGATGCGATGC ACCGCGCCGTGGCCGGCC TCGGC GGC-GGCCTCGGCGCCGC TTTGCTGCTGGCCGA TERM 1516 2011935 - 2011972 + g 79 -16.2 -2.87051 | gap 1, overlap 2011934 TTACGATGCGATGCA CCGCGCCGTGGCCGGCC TCGGC GGC-GGCCTCGGCGCCG CTTTGCTGCTGGCCG RPA1796 2013917 - 2015491 + | putative adenylate/guanylate cyclase RPA1797 2017013 - 2015733 - | hypothetical protein TERM 1517 2015779 - 2015800 + g 78 -10.1 -4.07568 | overlap 2015792 TTGGTCAGTGTCGGG CCGGTGATC AGCA GGTCGCCGG TTTTGGCGAAGAAGC TERM 1518 2015911 - 2015947 + g 76 -15.7 -2.87132 | AGTGCGCCGGCGGGA TCGTCGGCGTTGCCGGC GCC GCCGTCGGCGCCGTCGG TGTCTGCCGCGAGCG TERM 1519 2017155 - 2017185 + r 73 -13.2 -3.14132 | opp_overlap 2017158, overlap 2017158 GGCATCCTGAACGAA AAAGCCCTCCGCGG TGA TCGCGGAGGGCTGG TTCGTCGAGGCGAAG TERM 1520 2017182 - 2017158 - R 100 -18.6 -4.86621 | opp_overlap 2017158 2017155 ATCCTGAACGAAAAA GCCCTCCGCG GTGAT CGCGGAGGGC TGGTTCGTCGAGGCG TERM 1521 2017158 - 2017182 + r 87 -19.3 -2.77899 | opp_overlap 2017158, overlap 2017155 ATCCTGAACGAAAAA GCCCTCCGCGG TGA TCGCGGAGGGC TGGTTCGTCGAGGCG TERM 1522 2017244 - 2017203 - R 81 -13.7 -3.65046 | gap 1, opp_overlap 2017206, overlap 2017206 CGTCGAGGCGAAGAA GAGGGCGAACTAGCCGCCGC TCG GCG-CGGCGACTTCGCCTTC GATCACGTCGCCGAA TERM 1523 2017206 - 2017241 + r 75 -14 -3.06796 | gap 1, opp_overlap 2017203 2017206 CGAGGCGAAGAAGAG GGCGAACTAGCCGCCGC TCG GCG-CGGCGACTTCGCC TTCGATCACGTCGCC TERM 1524 2017241 - 2017206 - R 71 -14 -2.64045 | gap 1, opp_overlap 2017206, overlap 2017203 CGAGGCGAAGAAGAG GGCGAACTAGCCGCCGC TCG GCG-CGGCGACTTCGCC TTCGATCACGTCGCC RPA1798 2018447 - 2017212 - | putative periplasmic binding protein for ABC transporter for branched chain amino acids TERM 1525 2018618 - 2018602 - R 77 -13.7 -3.30106 | overlap 2018600 2018598 TCGAATGGAAATAGA TCCGCGC GCT GCGCGGA AATGTCGCGCGGATG ung 2020177 - 2018690 - | Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein RPA1800 2021524 - 2020274 - | Elongator protein 3/MiaB/NifB TERM 1526 2021709 - 2021684 - H 75 -3.9 -4.74504 | gap 1, overlap 2021687 ACGGCAATGGAAAAA GGAGCGGCGC ATGGACA GCGCC-CGCC ACGGCATGCTTGCGC RPA1801 2021694 - 2022479 + | hypothetical protein TERM 1527 2022506 - 2022538 + F 74 -14.2 -2.53876 | gap 1 CGCCGCCACGTGTCG TCGCCGCCAAGCGCG ACAA CGCGC-TGGTGGTGA TCGCTTGCGATGCGC TERM 1528 2022840 - 2022788 - g 70 -13.6 -3.03159 | gap 3, opp_overlap 2022788 2022792 CCAAGCTGCTGAACA TGCTGACCGCGGCGCTGACGCGGCA GGGCTT TG-CG-GTCAGCGCCGCGATC-GCC GGCACCGCGGTGGCG TERM 1529 2023626 - 2023672 + G 89 -15.1 -4.07568 | gap 2 AGATGTCGGCGATGC GCCGTGGCCGGCGCGCGCCGACG AGC CGCCGCTGCG-GCC-GCTACGGC TTTTGCAACAGCCCG RPA1802 2022532 - 2023968 + | hypothetical protein TERM 1530 2024031 - 2024072 + F 90 -18.1 -3.06183 | opp_overlap 2024036 2024040, overlap 2024036 2024040 GAGGAGGCGAAGCCG ACGAAGCAATCCAGTCCCG CACA CGGAGCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 1531 2024067 - 2024036 - f 83 -15.2 -3.18681 | opp_overlap 2024031 2024036 2024040, overlap 2024040 GGCGAAGCCGACGAA GCAATCCAGTCCCG CACA CGGAGCTGGATTGC TTCGCTTCGCTCGCA TERM 1532 2024036 - 2024067 + F 83 -15.2 -3.19192 | opp_overlap 2024036 2024040, overlap 2024031 2024040 GGCGAAGCCGACGAA GCAATCCAGTCCCG CACA CGGAGCTGGATTGC TTCGCTTCGCTCGCA TERM 1533 2025408 - 2025430 + G 71 -3.4 -4.63486 | overlap 2025409 GCTCGGCATCACCTG CGTCGATC CGACCGA GATCGACC TTTTGTTCGAGCGCT TERM 1534 2027028 - 2027059 + G 74 -15 -3.01712 | CGCGCTGTGGGCGGT GCGGCGGCTGCCCG ACGA CGTGCCGCTGCCGC TGTTCGAAGCCGCCA dnaE2 2024122 - 2027709 + | error-prone DNA polymerase RPA1804 2028668 - 2027715 - | hypothetical protein RPA1805 2028745 - 2029695 + | LysR family transcriptional regulator TERM 1535 2030327 - 2030310 - g 79 -8.4 -4.39386 | overlap 2030301 TCGAAATCACCAAAA TCGGCG AGGGGG CGCCGA AGCCGTGGCCGGAAG RPA1806 2029742 - 2031139 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1536 2031250 - 2031265 + F 73 -3.2 -4.7416 | overlap 2031252 GCGCTGGTGTCATCA TTCGCT GCTA AGCGCA TTTTTGCCGTTTTCA TERM 1537 2032553 - 2032598 + G 73 -14.7 -2.85351 | gap 1, opp_overlap 2032550 2032549, overlap 2032559 CCGGGCGAAAAGGTC ATCACCCGG-GGCAGCCTGTTC ATC GATCGGGCTGCCACCGGGTAAC TCTGGTCTCCACACG RPA1807 2031359 - 2032597 + | HlyD family heavy metal efflux protein czcA1 2032754 - 2035876 + | putative RND divalent metal cation efflux transporter CzcA RPA1809 2036076 - 2036393 + | hypothetical protein RPA1810 2037930 - 2036488 - | putative outer membrane protein RPA1811 2038884 - 2038105 - | enoyl-CoA hydratase/isomerase RPA1812 2039705 - 2038968 - | hypothetical protein TERM 1538 2039532 - 2039550 + g 79 -3.1 -5.06414 | gap 1, overlap 2039532 GGCCTTGGCCGGCTT GG-CGTGG TGCT TCACGGCC TTTTTCTTCGGCGCC TERM 1539 2039751 - 2039741 - H 71 -8.2 -3.96148 | GCCCGTGACCAGAAA CCGC GGG GCGG TGGCGTCAGCGGGGC RPA1813 2039897 - 2040505 + | RNA polymerase sigma factor TERM 1540 2040978 - 2041027 + G 73 -14.9 -2.87463 | gap 1, overlap 2040993 2041007 GCCGTCGCGCCCGGC GCTTGCGGGCGCGCTT-GCCGGCA TGC TGTCGGCGGGGCTCGCCGGCACGC TGTATGCCGCGCATT RPA1814 2040502 - 2041146 + | hypothetical protein RPA1815 2041227 - 2041607 + | hypothetical protein RPA1816 2041668 - 2043896 + | putative outer membrane receptor for iron transport TERM 1541 2043934 - 2043907 - T 71 -14 -2.53263 | opp_overlap 2043905 2043901 GGTAGGTGGAACGCA GTCGCCGGCCGC TCAG GCGGCCGGCGGT GCGGCGACGGTGGAT RPA1817 2045028 - 2043919 - | hypothetical protein TERM 1542 2045072 - 2045055 - R 73 -8.4 -4.08279 | opp_overlap 2045068 AGAGCGGACAAAGAA CGCCTG TTTCTT CAGGCG CAGGAAATTCGGTTT RPA1818 2046355 - 2045066 - | putative diguanylate cyclase (GGDEF) RPA1819 2046600 - 2047169 + | RNA polymerase sigma factor TERM 1543 2047424 - 2047473 + G 93 -10.7 -4.42464 | gap 3, overlap 2047429 2047430 2047470 GCGATCGACGCCGAG CCGGC-A--CGGGCGCCGGGCGCC GGGCA GGGGCTCGGCGCGCGCTTTGCCGG TTTCTTTGCCGGGTT TERM 1544 2047429 - 2047465 + G 77 -12.8 -3.671 | overlap 2047424 2047430 CGACGCCGAGCCGGC ACGGGCGCCGGGCGCC GGGCA GGGGCTCGGCGCGCGC TTTGCCGGTTTCTTT TERM 1545 2047430 - 2047464 + G 77 -16.3 -2.79175 | overlap 2047429 2047424 GACGCCGAGCCGGCA CGGGCGCCGGGCGCC GGGCA GGGGCTCGGCGCGCG CTTTGCCGGTTTCTT RPA1820 2047166 - 2047999 + | hypothetical protein TERM 1546 2048142 - 2048131 - f 87 -5.8 -5.24129 | GCGCGCGAGAAAAAA TCCG CAAC CGGA TTGAACGTCTGGGCG TERM 1547 2048254 - 2048283 + F 100 -17.9 -4.20136 | GCTGATATGGCTTTT GACCCGCCCGG TTGTCCCC CCGGGCGGGTC TTTCGTTTTCCGGCT RPA1821 2048486 - 2048995 + | hypothetical protein TERM 1548 2049456 - 2049481 + G 76 -6 -4.56133 | overlap 2049458 GTGCTCAATCGTCGC CTGTCCCGCA CAGTTC TGCGGGCCTG TTTTCGTTCTTCACC RPA1822 2049434 - 2051500 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 1549 2051532 - 2051565 + F 73 -13 -3.15249 | opp_overlap 2051523 2051534, overlap 2051522 2051520 AAATAACTTGCAACT AACGTGCGCCCGGG CCTTGT CCCGGGCGCGCGCG TTGATGCGACCTGTG TERM 1550 2051563 - 2051534 - f 93 -17.8 -3.36135 | opp_overlap 2051532 2051522 2051520, overlap 2051523 ATAACTTGCAACTAA CGTGCGCCCGGG CCTTGT CCCGGGCGCGCG CGTTGATGCGACCTG RPA1823 2051982 - 2054615 + | TonB dependent receptor RPA1824 2054711 - 2055226 + | hypothetical protein RPA1825 2055557 - 2055318 - | type IV pilus assembly PilZ TERM 1551 2055526 - 2055538 + g 83 -4.7 -5.01497 | overlap 2055523 GCAGCCTTCAGGACG CGCCG ACG CGGAG TTTTTCTCTGCTCAT RPA1826 2057048 - 2055690 - | hypothetical protein RPA1827 2057414 - 2057154 - | hypothetical protein RPA1828 2058131 - 2057481 - | peptidase C15, pyroglutamyl peptidase I argK 2059117 - 2058128 - | arginine/ornithine transport system ATPase TERM 1552 2059154 - 2059190 + r 70 -12.4 -3.14527 | gap 2, overlap 2059152 GGCGCCAGGAGCGAG GGGAG-TCCG-GCGCG GAATGAG CGCGCGCGGATCTCCC TGTTGATGACGCTTC RPA1830 2059533 - 2059204 - | hypothetical protein RPA1831 2059796 - 2059524 - | hypothetical protein RPA1832 2060753 - 2059995 - | hypothetical protein TERM 1553 2060370 - 2060349 - G 72 -4.3 -4.57073 | opp_overlap 2060368, overlap 2060351 CAGGTCGGTGAAAAA CGGGCGGAT GCTG ATGCGCCTG CTGAGCTGCTTGTCC TERM 1554 2060862 - 2060879 + r 76 -8.3 -4.16943 | overlap 2060861 2060872 AGGAAGGATTTCAAC GCCGCGC TGGC GCGCCGC TTTTCGCATCTGGCC RPA1833 2061242 - 2060841 - | PilT protein, N-terminal RPA1834 2061505 - 2061248 - | hypothetical protein TERM 1555 2061532 - 2061515 - R 73 -8.5 -4.0641 | opp_overlap 2061511 2061515 CTTCATGCAGACAAA CTAGTCT GGTT AGACTAG TTCGTCAATTAAGCC mutB 2063728 - 2061569 - | methylmalonyl-CoA mutase RPA1836 2064255 - 2063791 - | glutathione-dependent formaldehyde-activating, GFA RPA1837 2066123 - 2064252 - | methylmalonyl-CoA mutase TERM 1556 2064910 - 2064934 + g 80 -17.1 -2.79183 | CCGGCCTGCAGCGCG GCGAGCGCGCC GCC GGCGCGCTCGA TCTCCTGGAACTGGG folK 2066772 - 2066281 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 2067139 - 2066774 - | dihydroneopterin aldolase folP 2067993 - 2067136 - | dihydropteroate synthase RPA1841 2068466 - 2068059 - | hypothetical protein RPA1842 2068852 - 2068484 - | hypothetical protein RPA1843 2069189 - 2070799 + | hypothetical protein RPA1844 2071008 - 2072414 + | hypothetical protein RPA1845 2072749 - 2075049 + | putative tonB-dependent receptor protein RPA1846 2075163 - 2075897 + | hypothetical protein RPA1847 2075894 - 2076175 + | hypothetical protein RPA1848 2076237 - 2077811 + | hypothetical protein RPA1849 2077808 - 2078095 + | hypothetical protein RPA1850 2080132 - 2078135 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 1557 2079667 - 2079694 + g 77 -12.8 -3.64703 | gap 1 GTTTGCCCTGCAATC CGTCGTGCTCGGT GAG ACCGAGTACG-CG TTTGGCTGACAACAG TERM 1558 2080404 - 2080425 + r 90 -15.1 -3.76125 | opp_overlap 2080404 GTGCCCACGCAAAAA CGCCGCCCG GAAT TGGGCGGCG TTTGAATTCCAATAG TERM 1559 2080425 - 2080404 - R 100 -14.4 -4.65895 | opp_overlap 2080404 GTGCCCACGCAAAAA CGCCGCCC GGAATT GGGCGGCG TTTGAATTCCAATAG RPA1851 2081661 - 2080588 - | hypothetical protein TERM 1560 2082051 - 2082014 - H 73 -12.5 -3.21099 | CCCTGGCAGGACGAA GCCGCAGCGCGCGACCG GCTG CGCCAGCGCGCGGCAGC TCCGCTCGAGATCAA TERM 1561 2082674 - 2082648 - H 89 -17.3 -3.19653 | gap 1, opp_overlap 2082648, overlap 2082639 GGACAATTTGACGAA CGCGCC-CGCGG CCTG CCGCGCGGCGCG TTTCGAACCGACGAC TERM 1562 2082648 - 2082674 + H 93 -17.3 -3.53012 | gap 1, opp_overlap 2082648 2082639 GGACAATTTGACGAA CGCGCC-CGCGG CCTG CCGCGCGGCGCG TTTCGAACCGACGAC mucR 2082702 - 2083118 + | MucR family transcriptional regulator RPA1853 2083866 - 2083126 - | putative short-chain dehydrogenase RPA1854 2083944 - 2084579 + | TetR family transcriptional regulator RPA1855 2084701 - 2085312 + | hypothetical protein RPA1856 2085770 - 2085342 - | Fe-S metabolism associated SufE RPA1857 2086308 - 2085886 - | hypothetical protein TERM 1563 2085990 - 2086048 + g 100 -19.8 -3.38272 | overlap 2086040 TCAGCGTGTCGCGCG GCGCGAGCGA-CGGATCGG-GCGCATCGGC GGC GCCGAT-CGCACCGGTCGGCTCGC-CGCGC TTCTCGGTGATGATC TERM 1564 2086770 - 2086807 + G 73 -13.3 -3.33815 | overlap 2086747 TGCTGCATCCGTCGG CGCGCTATGACGCGCTG ACGA CTGCGCGGCATCGTGCG TTCCTTGCGCCGCGT TERM 1565 2086837 - 2086852 + G 79 -11.8 -3.84394 | overlap 2086814 TCTGCTTGGAAGCCT CGCCGC TTTC GCGGCG TTTCCATTGTATCTG TERM 1566 2087456 - 2087419 - g 73 -13.3 -3.32844 | opp_overlap 2087437 CCCGGCAGCCGAGAA CCTGCTCGGAACGCCGG TGGC CCGGCTCGCCGAGCACG GCCTGTTCGATCGAG RPA1858 2086715 - 2088547 + | sensor histidine kinase RPA1859 2088540 - 2089325 + | peptidoglycan-binding domain 1 RPA1860 2089478 - 2089819 + | hypothetical protein TERM 1567 2089888 - 2089915 + T 73 -8.5 -4.07687 | gap 2, overlap 2089893 CCGTGCGATGCGATC CCGTGGCGTCATC CGTC GA-GACGCC-CGG TTTTGCCGGGCGCGT RPA1861 2090968 - 2089994 - | hypothetical protein TERM 1568 2091088 - 2091064 - R 80 -15 -3.17238 | overlap 2091067 AGACCAGAGACGCAA GAACGGGCGC TTGGC GCGCCCGTCC GTCGAAGTCACTATT TERM 1569 2091085 - 2091067 - R 81 -13.1 -3.72231 | overlap 2091064 CCAGAGACGCAAGAA CGGGCGC TTGGC GCGCCCG TCCGTCGAAGTCACT RPA1862 2092193 - 2091120 - | polysaccharide deacetylase RPA1863 2092803 - 2092273 - | hypothetical protein RPA1864 2093201 - 2093983 + | hypothetical protein RPA1865 2094556 - 2093990 - | hypothetical protein RPA1866 2095131 - 2094553 - | hypothetical protein RPA1867 2097448 - 2095175 - | penicillin-binding protein 1A TERM 1570 2095342 - 2095377 + g 70 -13.3 -3.03151 | overlap 2095366 CCCGTACCAGGATCT CGGCGCCG-CGCCGCGT CAGC AC-CGGCGGCGGGGCCG CTTTCATTTCGGCGC TERM 1571 2095366 - 2095378 + g 78 -10.5 -4.06055 | overlap 2095342 GCCGCGTCAGCACCG GCGGC GGG GCCGC TTTCATTTCGGCGCT TERM 1572 2097740 - 2097756 + G 72 -5.1 -4.30719 | opp_overlap 2097740 2097739, overlap 2097736 GCGCGCCCCAAGAAG CCGTC CGCGCAA GACGG TTTCTTCTGGAAGAC RPA1868 2097623 - 2098231 + | hypothetical protein RPA1869 2098286 - 2099029 + | hypothetical protein TERM 1573 2099065 - 2099038 - T 76 -13.5 -3.16564 | GGCGTAGCGGATCAA TGCCGGTTCGG CTGATC CCGAACCGACA ACCAAACTTCATTTC RPA1870 2099839 - 2099324 - | MarR family transcriptional regulator RPA1871 2099919 - 2101157 + | putative cytochrome P450 thcC 2101167 - 2101487 + | rhodocoxin RPA1873 2101563 - 2102777 + | urea/short-chain binding protein of ABC transporter RPA1874 2103183 - 2102977 - | hypothetical protein RPA1875 2104325 - 2103180 - | hypothetical protein TERM 1574 2103205 - 2103243 + g 74 -12.2 -3.59979 | CTCGCATCGGATGGC GCCGCGGTGCGGCTGCGG ACG CTGCCGCCGAAGCGCTGC TTTGCGATCCAGAGA RPA1876 2106625 - 2104322 - | putative TonB-dependent iron siderophore receptor RPA1877 2107191 - 2108096 + | hypothetical protein TERM 1575 2108293 - 2108323 + T 100 -16.1 -4.62622 | gap 1, overlap 2108294 TTCCTCCCTAGACTT G-GGCCCGGGCGCC GAAT GGCGACCGGGCCTC TTTATTTGTCCTTCA TERM 1576 2108294 - 2108321 + T 100 -19.8 -3.91213 | overlap 2108293 TCCTCCCTAGACTTG GGCCCGGGCGCC GAAT GGCGACCGGGCC TCTTTATTTGTCCTT RPA1878 2109569 - 2108394 - | putative 6-aminohexanoate-dimer hydrolase RPA1879 2110752 - 2109685 - | choloylglycine hydrolase TERM 1577 2111528 - 2111561 + G 100 -11.8 -4.56775 | overlap 2111530 2111551 CTCAGGCGTGTGGGT GTCGGCCG-GGATCGG TGGC CCGATCCTCGGC-GGC TTTTTCGCCGAGCAT TERM 1578 2111530 - 2111560 + G 73 -13.3 -3.33744 | gap 1, overlap 2111528 2111551 CAGGCGTGTGGGTGT CGGCCG-GGATCGG TGGC CCGATCCTCGGCGG CTTTTTCGCCGAGCA TERM 1579 2112275 - 2112245 - g 73 -12.6 -3.35679 | GGTGTCGATCCAGAA CGCGGTGCCG CGGCCGCAGAT CGGCACCGCG ACCGGCGCGATGAAC RPA1880 2110908 - 2112551 + | MFS family transporter TERM 1580 2113667 - 2113628 - g 82 -15.6 -3.39327 | gap 1, opp_overlap 2113631, overlap 2113606 2113611 2113631 GCCGGACACCGAGAA GGACGCGGCGCTGCCGGCG CAT CGC-GGCGCCGCCGCGTTC ATCGACGGCACTGAC TERM 1581 2113631 - 2113664 + G 86 -18.1 -3.14211 | gap 1, opp_overlap 2113606 2113611 2113628 2113631 GGACACCGAGAAGGA CGCGGCGCTGCCGGCG CAT CGC-GGCGCCGCCGCG TTCATCGACGGCACT TERM 1582 2113664 - 2113631 - g 76 -15.9 -2.85712 | gap 1, opp_overlap 2113631, overlap 2113606 2113611 2113628 GGACACCGAGAAGGA CGCGGCGCTGCCGGCG CAT CGC-GGCGCCGCCGCG TTCATCGACGGCACT RPA1881 2112675 - 2114075 + | hypothetical protein RPA1882 2114160 - 2114351 + | Flp/Fap pilin component RPA1883 2114647 - 2116200 + | hypothetical protein TERM 1583 2118182 - 2118205 + G 73 -6.6 -4.39287 | gap 1, opp_overlap 2118149, overlap 2118183 2118188 2118190 GACGATCGAGTCGGC GCGCG-CCGGC GAG GCTGGTCGCGG TTTTGCTGTGGTTGC RPA1884 2116794 - 2118473 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 1584 2118494 - 2118541 + F 100 -16.2 -4.08216 | gap 1, overlap 2118496 CGTCTGAGCTTTTGG AGCGGAGGCCCTGCGCCGCGCGG ACA TCGCGCGAC-CGGGGCCTTCGTG TTTTCGGCCGCGTCG TERM 1585 2118496 - 2118539 + F 100 -21 -3.63922 | gap 1, overlap 2118494 TCTGAGCTTTTGGAG CGGAGGCCCTGCGCCGCGCGG ACA TCGCGCGAC-CGGGGCCTTCG TGTTTTCGGCCGCGT TERM 1586 2119759 - 2119737 - g 88 -10.5 -4.41494 | CACCCTGAACGAAAA GCGCGAAGC GGTCG GCTACGCGC CGATCGAAGGCGGCG RPA1885 2118613 - 2119788 + | portal protein RPA1886 2119814 - 2120014 + | hypothetical protein TERM 1587 2120829 - 2120804 - g 77 -16.1 -2.72344 | overlap 2120806 CGCCACCGTCAAGCA CACGCCGCGGC CCTC GCCGCAGCGCG CCGCGGCGGAGGCGG TERM 1588 2120851 - 2120806 - g 76 -15.4 -2.90723 | gap 2, overlap 2120804 CCACCGTCAAGCACA CGCCGCGGC-CCT-CGCCGCAG CGCG CCGCGGCGGAGGCGGCGTGGCG CCGCGTCCATGACGC TERM 1589 2121013 - 2120964 - g 81 -14.9 -3.53012 | gap 1, opp_overlap 2120949 CGCGCCGGGCGCAAA CAGGCGCTG-GCGAGTTTCAGCCG GCG CGGCTGAGGCGCGCGCAGGGCCCG CCGTCGATCCGCGGG RPA1887 2120319 - 2120996 + | phage protease RPA1888 2121168 - 2122421 + | major capsid protein TERM 1590 2122934 - 2122909 - g 74 -5.3 -4.45544 | gap 1, opp_overlap 2122925 2122926, overlap 2122910 2122911 GCGGACGAATTAAAA GC-GCGCGACGG CGA CCAGCGCACCGC GCTTCTGAGCCTTTT TERM 1591 2123079 - 2123065 - g 71 -12.8 -3.2964 | opp_overlap 2123064 2123062 AAATGGTTTCCACAA GCCGGC GAC GCCGGC ATGTGTCTCGATCTT RPA1889 2122753 - 2123124 + | hypothetical protein RPA1890 2126441 - 2123340 - | hypothetical protein TERM 1592 2125803 - 2125828 + g 75 -6.9 -4.4078 | TTTTCGGTCAATAGC GCGAAGCTTGT CGTT GTAAGTTTCGC TTTTGCTTACGGCGG TERM 1593 2127841 - 2127805 - g 86 -17.1 -3.25823 | CGCGGCGGACACGAA GGCCGCGGGCGACACGG AGG CCGCGGCGCCTGCGCCC GAGAGCGAGGCCGAG RPA1891 2127296 - 2128252 + | hypothetical protein RPA1892 2128329 - 2129489 + | terminase GTA RPA1893 2129587 - 2129865 + | hypothetical protein RPA1894 2130196 - 2129885 - | hypothetical protein RPA1895 2130982 - 2130278 - | peptidase S1 and S6, chymotrypsin/Hap TERM 1594 2130549 - 2130582 + g 89 -14.5 -4.13767 | gap 1 CCGGGGCGGCCGGTC GCGGTCAGCGTCGCGC TGC GCGCGGTGCCG-CCGC TTTTGCCGTCGCCGC TERM 1595 2130972 - 2130939 - G 70 -10.2 -3.73953 | gap 1 ACGATGGTGACCAAA GCGCGGCCGAGCGCG CCGGT CGC-CTCGGGGGCGC CGCCGACCATTGCGG TERM 1596 2131638 - 2131589 - g 82 -15.5 -3.41051 | gap 1, opp_overlap 2131627, overlap 2131590 GCAGTGGTACGACAA CCGCGGCAGCGGTGCCGGCGCTGC GCT GCTGC-CCGGCGGCGTCGCCGCGA TGATCGCCGGCTATC TERM 1597 2131637 - 2131590 - g 80 -16.8 -2.64416 | gap 1, opp_overlap 2131627, overlap 2131589 CAGTGGTACGACAAC CGCGGCAGCGGTGCCGGCGCTGC GCT GCTGC-CCGGCGGCGTCGCCGCG ATGATCGCCGGCTAT GTA 2131110 - 2131670 + | hypothetical protein GTA 2131667 - 2131987 + | hypothetical protein TERM 1598 2132052 - 2132103 + G 81 -12.3 -3.78329 | gap 3, overlap 2132049 CGACACCGCGCTGCT CGCCGCGCTCG-GCGGGCCGCGGATC TAC GATGAGCCGC-CGCGCGAG-GCGGCG TTTCCGTTCGTCACG GTA 2131984 - 2132394 + | hypothetical protein GTA 2132407 - 2132814 + | hypothetical protein TERM 1599 2133134 - 2133146 + G 70 -10.5 -3.64703 | CCTTCGGCGAGGCGG CGGCG TGA CGCCG TTTCCGTGGGCGGAG GTA 2132824 - 2133326 + | hypothetical protein GTA 2133338 - 2133931 + | hypothetical protein TERM 1600 2133960 - 2133991 + F 76 -10.2 -3.85817 | opp_overlap 2133960 2133964 TGCGAGCGCAGCCAA GCAATCCAGCTC CGTGCATT GAGCGGGATTGC TTTGTCGCGGAGCCT GTA 2134093 - 2134731 + | hypothetical protein TERM 1601 2135013 - 2135025 + G 75 -3.3 -4.73682 | overlap 2135014 2135021 CGATGATGCGGGGTT ATCCC TTC GGGAC TTTTCTCTTCTGGCA TERM 1602 2135366 - 2135354 - g 71 -3.3 -4.58395 | overlap 2135355 CTCACGCTCGAAAAA GCTGC AGA GCAGA GCAAGCCGGCCGAGA TERM 1603 2136096 - 2136110 + G 72 -11.4 -3.61398 | TCGATACTCTCCTAA CCTCGC TCC GCGAGG TTGTTGCAACGCAGG RPA1904 2134844 - 2136670 + | hypothetical protein GTA 2136963 - 2137874 + | hypothetical protein GTA 2137914 - 2138366 + | hypothetical protein TERM 1604 2138817 - 2138866 + G 77 -15.7 -3.05596 | opp_overlap 2138804 2138799, overlap 2138817 CACCGGCCAGCCGAC GCGCCGCGCCGGCACGCTG-CGC TTCATC GCGTCGGAGTGACGGCGCG-CGC TTAGCTCAGCAGGTC RPA1907 2138431 - 2138856 + | hypothetical protein RPA1908 2139362 - 2138895 - | hypothetical protein TERM 1605 2139516 - 2139501 - H 72 -7.6 -4.11751 | opp_overlap 2139492, overlap 2139492 2139491 AGTAAGCTGTCAAAA TGACAG TATG CTGTCA TGATGCAAGCCAATG RPA1909 2139516 - 2139989 + | MarR family transcriptional regulator RPA1910 2139991 - 2140443 + | hypothetical protein RPA1911 2140469 - 2141014 + | nickel-dependent hydrogenase b-type cytochrome subunit TERM 1606 2144310 - 2144339 + G 70 -10.7 -3.60296 | gap 1, overlap 2144310 CCGCTGCCGCGTGGG C-CGCTGGCGCGGT GGG ACCGCGTCACCGCG TTTCGCGTCCAGATC TERM 1607 2144507 - 2144564 + G 100 -19.7 -3.39717 | gap 1, overlap 2144508 2144538 CTTGTCGCATCTACT GCGCGGGCAGGCCGGCAGCGATGCCGCG ATG CGCGATCTCG-TGCCGGCCGGCGCGCGG TTCGTGTTGCTCGAT TERM 1608 2144508 - 2144563 + G 100 -23.2 -2.63348 | gap 1, overlap 2144507 2144538 TTGTCGCATCTACTG CGCGGGCAGGCCGGCAGCGATGCCGCG ATG CGCGATCTCG-TGCCGGCCGGCGCGCG GTTCGTGTTGCTCGA RPA1912 2141169 - 2145041 + | hypothetical protein RPA1913 2145051 - 2146418 + | hypothetical protein RPA1914 2146542 - 2147303 + | putative glycohydrolase TERM 1609 2147832 - 2147803 - f 78 -9.9 -4.09685 | TCGGACCCGCGAAAA GGTCTGCGCTGCC ACCG GGCAGGACAGCCC GGGCGTGATCGACAG feuP 2147990 - 2148664 + | two-component transcriptional regulator FeuP feuQ 2148680 - 2150071 + | periplasmic sensor signal transduction histidine kinase lipA1 2150168 - 2150632 + | LipA a lipoprotein TERM 1610 2151649 - 2151616 - g 71 -12.3 -3.30443 | GGACGACGAGATCAA GGTCGCGGCCACGCC TTAC GGCGTTGCCGTCACC ATGGCGATCCAGGAT RPA1918 2150801 - 2152258 + | hypothetical protein cycH 2152421 - 2153527 + | cytochrome c-type biogenesis protein cycH cycJ 2153641 - 2154144 + | cytochrome c-type biogenesis protein CcmE cycK 2154141 - 2156123 + | cytochrome c-type biogenesis protein CcmF cycL 2156125 - 2156634 + | cytochrome C biogenesis protein TERM 1611 2156774 - 2156737 - T 72 -11.9 -3.35996 | gap 1, overlap 2156724 CATGGTCAGCGACAA CGGCGCCGAGCACGCGCG GAA CG-GCGCGATGGACGCCG GCGTTCGCGGCGCGC TERM 1612 2156917 - 2156890 - T 71 -12.6 -3.05384 | opp_overlap 2156891, overlap 2156893 CCGCTCTTCACTCAA GGACCCGGTCGC CGTG GCGGCCGGGTCT CCCTTGGGATGACGA TERM 1613 2156891 - 2156916 + T 86 -18.3 -2.53876 | opp_overlap 2156890 2156893 CGCTCTTCACTCAAG GACCCGGTCGC CGTG GCGGCCGGGTC TCCCTTGGGATGACG amiF 2157967 - 2156945 - | formamidase RPA1924 2158764 - 2158087 - | cobalamin synthesis protein/P47K RPA1925 2160473 - 2159007 - | putative transmembrane protein TERM 1614 2159243 - 2159226 - G 72 -5.5 -4.42062 | CATGGTGGAAATAAA GCCGG CCGCCATT CCGGC ATGACTTTCCTCGAC RPA1926 2160548 - 2161399 + | XRE family transcriptional regulator TERM 1615 2161520 - 2161549 + T 89 -17.1 -3.17392 | opp_overlap 2161518, overlap 2161523 CCGACGCATAGCAGC CGGCGCGAGGCCG TGAC CGGCCTCGCGTGG TTGGGTTCGGGAGTG TERM 1616 2161523 - 2161546 + T 90 -19.6 -2.78712 | opp_overlap 2161518, overlap 2161520 ACGCATAGCAGCCGG CGCGAGGCCG TGAC CGGCCTCGCG TGGTTGGGTTCGGGA RPA1927 2162175 - 2161591 - | hypothetical protein RPA1928 2163041 - 2162133 - | ferredoxin RPA1929 2163410 - 2164981 + | htrA-like serine protease RPA1930 2165214 - 2165939 + | two-component transcriptional regulator TERM 1617 2166062 - 2166077 + F 76 -7.6 -4.31293 | CGGTCTACCGACTTG CACTAC CTCC GTAGTG TTTCTTGGTATCTAA RPA1931 2166162 - 2167460 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 1618 2167500 - 2167531 + F 100 -23.8 -5.76633 | CAGCTATCACTCAGA CCGAGGCGTCGTCC CACA GGACGGCGCCTCGG TTTTTTTATGTCTGG RPA1932 2167673 - 2169121 + | periplasmic sensor signal transduction histidine kinase glnE 2169118 - 2172090 + | glutamate-ammonia-ligase adenylyltransferase RPA1934 2172400 - 2172149 - | hypothetical protein RPA1935 2173523 - 2172501 - | AraC family transcriptional regulator TERM 1619 2173595 - 2173605 + H 77 -2.4 -5.00616 | GCGGCCAAGTACTTT CAGC TTA GCGG TTTTTTCCGAGAAAG RPA1936 2173925 - 2177401 + | serine protease/outer membrane autotransporter TERM 1620 2177422 - 2177457 + F 100 -24.2 -4.59773 | TCTCTCACAGCCCAG CGAGCCCCGGTTCTGA GCGA TCAGAACCGGGGCTTG TTTTTGCGCGTGGGG RPA1937 2177757 - 2178716 + | transposase TERM 1621 2178790 - 2178829 + T 78 -7 -4.56597 | gap 1, overlap 2178791 2178793 2178795 CTCAGACTCTCCCCG AGTCATTCCGGG-GCGCGC GGA GCGCGAACCCGGAATCTCC TTTTTCCGAGAACGG TERM 1622 2178793 - 2178826 + T 70 -11.7 -3.23708 | gap 1, overlap 2178791 2178790 2178795 AGACTCTCCCCGAGT CATTCCGGG-GCGCGC GGA GCGCGAACCCGGAATC TCCTTTTTCCGAGAA TERM 1623 2178795 - 2178824 + T 80 -14.3 -3.18031 | gap 1, overlap 2178793 2178791 2178790 ACTCTCCCCGAGTCA TTCCGGG-GCGCGC GGA GCGCGAACCCGGAA TCTCCTTTTTCCGAG RPA1938 2181242 - 2178903 - | sensor histidine kinase, pleC RPA1939 2182810 - 2181428 - | cation diffusion facilitator family transporter TERM 1624 2182852 - 2182882 + r 73 -11.1 -3.61178 | opp_overlap 2182848, overlap 2182853 ACGCCGGAAAGGCGC GCGGCCCGTTACC CTGGT GGTAACGGGCAGG TTTGCGGTAGCTGCG TERM 1625 2182853 - 2182881 + r 75 -14.6 -2.76492 | opp_overlap 2182848, overlap 2182852 CGCCGGAAAGGCGCG CGGCCCGTTACC CTGGT GGTAACGGGCAG GTTTGCGGTAGCTGC RPA1940 2183909 - 2182941 - | putative quinone oxidoreductase TERM 1626 2183928 - 2183949 + r 76 -13.7 -3.13403 | gap 1, overlap 2183926 AAGCTCGTCCTGTTT CGCTGCGCCG ATC CGGCGC-GCG TCTTACTCCGCGGCC RPA1941 2184950 - 2183952 - | 2-nitropropane dioxygenase TERM 1627 2185074 - 2185108 + r 83 -16.5 -2.87931 | gap 1, opp_overlap 2185102 GCATTTCCGGCGTCA TTCCGGG-GCGCTCGC GTCA GCGAGCGAACCCGGAA TCTCTGCGAGATGAA RPA1942 2185973 - 2185188 - | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 1628 2186112 - 2186062 - R 91 -16.1 -3.61715 | gap 1, opp_overlap 2186063 2186082 TAGGCGTGCTAACAA CCTCGGAATTCCGGGTTCGCTCGC TGGC GCGAGCGC-CCCGGAATGACGGGG CGGGGAGCGCGGGTG panE 2187121 - 2186129 - | 2-dehydropantoate 2-reductase TERM 1629 2187162 - 2187138 - R 77 -13.6 -3.3251 | gap 1, overlap 2187136 2187140 AGACAGACGACAAGA CAGGCGTGGCC GTTC GGCCACGCC-G CGGTGAGACCAGATT TERM 1630 2187161 - 2187140 - R 89 -17.3 -3.22182 | overlap 2187138 2187136 ACAGACGACAAGACA GGCGTGGCC GTTC GGCCACGCC GCGGTGAGACCAGAT oxlT 2188550 - 2187210 - | oxalate/formate antiporter RPA1945 2189996 - 2188671 - | formyl-coenzyme A transferase TERM 1631 2189999 - 2190032 + r 81 -12.3 -3.88946 | overlap 2190002 GCATCTCTCCCATCG GTACGTCCGCCGCGG CGAT CCGCGACGAACGTCC TTGTTATGTCGCGTC TERM 1632 2190002 - 2190029 + r 71 -12.6 -3.01243 | overlap 2189999 TCTCTCCCATCGGTA CGTCCGCCGCGG CGAT CCGCGACGAACG TCCTTGTTATGTCGC RPA1946 2191039 - 2190065 - | GntR family transcriptional regulator TERM 1633 2191256 - 2191289 + H 73 -13.1 -3.16961 | opp_overlap 2191235 2191255 2191251 2191256, overlap 2191260 CGTCGAGCAACGAAG CGGGCGTGGCCGG GGTGCGAG CCGGCCGCGTTCG TCTTCCGTGTTATCC pqqB 2191349 - 2192275 + | pyrroloquinoline quinone biosynthesis protein PqqB TERM 1634 2192526 - 2192482 - g 73 -10.6 -3.73775 | gap 1 TCGATCCCGATCAAA GACGC-GGTGGTGATCTCGCG GTTT CGCGACCGCGCCACCCGCGTC GAGTGGCGGCACCGC pqqC 2192272 - 2193036 + | pyrroloquinoline quinone biosynthesis protein PqqC pqqD 2193041 - 2193349 + | coenzyme PQQ synthesis D TERM 1635 2194002 - 2193990 - g 72 -4.7 -4.56597 | overlap 2193991 2193992 CTGGGCGCTGAAAAA CCGCG CCG CGCTG ATGCCGACGCTTGCG pqqE 2193391 - 2194524 + | pyrroloquinoline quinone biosynthesis protein PqqE RPA1951 2195664 - 2194774 - | FusE-MFP/HlyD family membrane protein RPA1952 2195870 - 2195661 - | hypothetical protein RPA1953 2197882 - 2195870 - | FusB/FusC fusaric acid resistance pump TERM 1636 2196232 - 2196257 + g 70 -6.1 -4.21908 | gap 1, overlap 2196233 TCATCCGGTCGATCA TCAGTCCCGCCA CGC TGGCGCG-CTGG TTTTCGCTGCTGATA TERM 1637 2196555 - 2196529 - G 72 -5.1 -4.37886 | gap 1, overlap 2196533 GCACGCCGTACAAAA TGAACGCCGGCG CCAG CACCAGCG-CCA GACTTTCGAAATTGT TERM 1638 2197972 - 2197985 + H 76 -6.7 -4.53303 | opp_overlap 2197972 CGACCTTTACATAAA TGACC ATGG GGTCA TTTTATGTCAAGATG TERM 1639 2198103 - 2198079 - g 77 -5.5 -4.57837 | overlap 2198092 2198093 AGACGCCTGCAAAAA CGCTGACCAGC AAT GCGGCGCAGCG CTCCAAGCGGGTCAC RPA1954 2198048 - 2198734 + | TetR family transcriptional regulator TERM 1640 2198774 - 2198748 - T 72 -11.6 -3.26366 | opp_overlap 2198748, overlap 2198746 GAGATGTAACGAACA GCCTAGCCAC TTTGGTC GTGGCCAGGC TTGTACCGGCCATCC TERM 1641 2198817 - 2198854 + T 71 -6.2 -4.254 | gap 1, opp_overlap 2198820, overlap 2198818 GCCATATCTGCCGTA AGACGTCGATGCCCGGC ACGAG GCCGGGCAT-GACGGAG TTTGTTGGGTATTGG TERM 1642 2198851 - 2198820 - T 84 -16.7 -3.02263 | gap 1, opp_overlap 2198818 2198817 ATATCTGCCGTAAGA CGTCGATGCCCGGC ACGAG GCCGGGCAT-GACG GAGTTTGTTGGGTAT RPA1955 2199980 - 2198871 - | glutathione dependent formaldehyde dehydrogenase TERM 1643 2199208 - 2199259 + g 81 -7.9 -4.68103 | gap 1 CAGTCGAAGGTGTAG TCGGCGCCGCCATCGGTGAGC-CC GACGA GGTGCTGGACGATGTCGCCGTCGA TTTTCTTCGGGTTGA TERM 1644 2199313 - 2199340 + g 79 -8.4 -4.36914 | overlap 2199315 2199326 CGGCCCCATTCTTCC TTGTCGTCGTTG ATGT CGACGCCGACGA TTTTATCGGCGCCGA RPA1956 2201601 - 2200078 - | ATPase TERM 1645 2201262 - 2201248 - G 81 -12.8 -3.86015 | opp_overlap 2201244 2201241 CATGCCGTCGAGAAA CGCCGC GGC GCGGCG CATCTGGTTCTCGGC RPA1957 2202744 - 2201728 - | alkanal monooxygenase (LuxA-like protein) RPA1958 2203479 - 2202856 - | TetR family transcriptional regulator RPA1959 2203559 - 2204647 + | putative RND efflux membrane protein RPA1960 2204644 - 2205717 + | putative RND efflux membrane protein RPA1961 2205714 - 2208764 + | RND efflux transporter RPA1962 2208766 - 2209047 + | hypothetical protein RPA1963 2209076 - 2210269 + | patatin-like phospholipase domain-containing protein RPA1964 2210328 - 2210885 + | hypothetical protein RPA1965 2212899 - 2210911 - | putative adenylate/guanylate cyclase RPA1966 2213798 - 2213166 - | TetR family transcriptional regulator RPA1967 2213962 - 2215077 + | putative component of multidrug efflux system TERM 1646 2216156 - 2216183 + G 72 -13.4 -3.21416 | overlap 2216176 GCTCGGCTGGCGCGT CGGCATCGTGGT CGCG ACCTCGGTGCCG TTGGTGCTCGGCATC RPA1968 2215077 - 2218232 + | RND efflux transporter yjbN 2218343 - 2219338 + | tRNA-dihydrouridine synthase A RPA1970 2219888 - 2219352 - | hypothetical protein RPA1971 2220183 - 2219911 - | hypothetical protein RPA1972 2221778 - 2220180 - | periplasmic sensor signal transduction histidine kinase TERM 1647 2221422 - 2221398 - G 70 -8.4 -3.99324 | opp_overlap 2221403, overlap 2221382 GTCGAGCAGCACAAA GCGCCGCCGC CAGGT GCGGGTGCGC GGCACCGAGGCCGGC RPA1973 2222813 - 2221944 - | 3-hydroxyisobutyrate dehydrogenase TERM 1648 2222682 - 2222631 - G 75 -13.8 -3.2327 | gap 4, opp_overlap 2222631, overlap 2222620 GCAAGCCATCACGAA GTCCTGGCCGGCCGCGGCCTCTGCCG GGGT CGGC-GCGGC-GCGGCC-GCC-GAAC TTCTCGGCCCAGGCC TERM 1649 2223360 - 2223405 + G 71 -14 -2.87564 | gap 2, opp_overlap 2223336 TCGCGTTGACTGCCG AGCGTCA-GCCGGGCAG-TGCG CCGG CGCAGCGGCCCGGCGTGGCGCC TGTGTCGGCGCATCG RPA1974 2223122 - 2224234 + | ATP/GTP-binding-like protein TERM 1650 2224416 - 2224426 + F 90 -2.4 -5.52384 | opp_overlap 2224410, overlap 2224406 CGCCACCAACGGCTC CGCG GTT CGCC TTTTTTTGGTCGGGC RPA1975 2224485 - 2225576 + | twin-arginine translocation pathway signal TERM 1651 2225625 - 2225598 - T 100 -18.4 -4.54727 | opp_overlap 2225599, overlap 2225599 CGCCTGAAACGAAAA GGCCCGGCCTCC GCGA GGAGGCCGGGCT TTTTTATTGCCGTTC TERM 1652 2225624 - 2225599 - T 100 -21.9 -3.32354 | opp_overlap 2225599, overlap 2225598 GCCTGAAACGAAAAG GCCCGGCCTCC GCGA GGAGGCCGGGC TTTTTTATTGCCGTT TERM 1653 2225599 - 2225624 + T 100 -21.9 -5.4756 | opp_overlap 2225599 2225598 GCCTGAAACGAAAAG GCCCGGCCTCC GCGA GGAGGCCGGGC TTTTTTATTGCCGTT RPA1976 2227607 - 2225766 - | TRAP dicarboxylate family transporter DctM subunit TERM 1654 2226490 - 2226476 - G 85 -10 -4.26076 | CGACGCCGATGAAAA TGGTGC CGA GCACCA GGAAGATCAGGCCGA RPA1977 2228241 - 2227645 - | TRAP dicarboxylate family transporter DctQ subunit TERM 1655 2228439 - 2228457 + r 72 -12.4 -3.29144 | GGTGACGCTCATGTG CCGGCTGA CGC TCGGCCGG TTATGGCGGCGGTCG moaA 2229449 - 2228415 - | molybdenum cofactor biosynthesis protein A RPA1979 2230005 - 2229556 - | hypothetical protein cbbZ 2230846 - 2230169 - | phosphoglycolate phosphatase TERM 1656 2230466 - 2230448 - G 72 -11.6 -3.55071 | GCAGATCGCCGCAAA GCGCGGGC TGA GCCCGAGC CGGTCGAGCAGCAGC cbbI 2230997 - 2231695 + | ribose-5-phosphate isomerase A TERM 1657 2231825 - 2231808 - g 71 -12.7 -3.26471 | TCAGGCGCAGACCAA GCAGCCG TCGC CGGCTGC GATCGCGTCCGCCAA RPA1982 2231692 - 2232231 + | hypothetical protein gor 2232249 - 2233634 + | glutathione reductase TERM 1658 2234002 - 2233975 - g 70 -10.4 -3.68222 | opp_overlap 2233974 2233975 GCGCAACCTGAAGAA GGCGCTGGCCAC GGTG GCGGCCGGCGAC GCTTTCCTGCTCCAG aroG2 2233823 - 2235211 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1659 2235436 - 2235390 - g 70 -9.9 -3.64703 | opp_overlap 2235404, overlap 2235391 TGGCGCGGACTGAAA TTCGCGACCCGCTCCGAGCAG GCGAT CCGCGAGGAGCTGGTCGCGCT CGTGCTTGCCGTGCC RPA1985 2235342 - 2235695 + | diacylglycerol kinase TERM 1660 2235858 - 2235819 - g 86 -17 -3.33261 | gap 1, opp_overlap 2235817 2235813 2235810 CGGCAATGCCGACAA GGCGCGTGCGGCGCGCCGC CGC GCGGCG-GCCGATGGCGCC GATCTCGTCGTCTAT TERM 1661 2236137 - 2236122 - g 74 -7.5 -4.25104 | CGTGTTCGATGAAAA GCGGG TGTTCG CCCGC GGCCCGGTGTCGGGT nadE 2235739 - 2237493 + | NAD synthetase TERM 1662 2237512 - 2237548 + T 74 -5.8 -4.44046 | gap 1, overlap 2237509 2237504 GAAGTTGCGGGCGCG CGGACAGC-CGACGCTT TCGC AAGCGTCGCGCGCTCGG TTTGTTTGACGTGCA RPA1987 2238076 - 2237747 - | hypothetical protein RPA1988 2239309 - 2238302 - | AraC family transcriptional regulator TERM 1663 2238447 - 2238433 - G 77 -12.8 -3.65902 | overlap 2238412 CCGATGTCACCGAAA GCGCCG GAT CGGCGC CGGCCAGCATCTGGC TERM 1664 2239657 - 2239643 - H 73 -12.8 -3.19192 | opp_overlap 2239653, overlap 2239638 CTGCAGCGAACCGAA GGCGCC CCC GGCGCC GGATCGAATCTCGCG RPA1989 2239874 - 2240200 + | hypothetical protein TERM 1665 2240399 - 2240411 + G 71 -9.1 -3.87815 | opp_overlap 2240384 2240390 CAACACCGCACTGGG GTCGC GCC GCGAC TTTCTCGGCCTCGCG RPA1990 2240367 - 2242157 + | sulfatase RPA1991 2242169 - 2243230 + | hypothetical protein TERM 1666 2243414 - 2243428 + T 83 -7 -4.86939 | overlap 2243415 TCGCGTTTGGCCCTT AGCGGC CGT GCCGCG TTTTTGGATTTGTTG RPA1992 2243895 - 2243485 - | NtrR protein RPA1993 2244155 - 2243892 - | virulence-associated protein RPA1994 2244336 - 2244761 + | hypothetical protein TERM 1667 2244776 - 2244798 + T 100 -20.6 -4.18018 | opp_overlap 2244776 AGACGTCACGCAAAA GAGGCCGCCG TTT CGGCGGCCTC TTTTGGCTCGGAGAA TERM 1668 2244798 - 2244776 - T 100 -20.6 -4.19258 | opp_overlap 2244776 AGACGTCACGCAAAA GAGGCCGCCG TTT CGGCGGCCTC TTTTGGCTCGGAGAA RPA1995 2246027 - 2244858 - | hypothetical protein RPA1996 2246521 - 2246213 - | hypothetical protein cysS 2246922 - 2248313 + | cysteinyl-tRNA synthetase TERM 1669 2248458 - 2248491 + F 87 -18.9 -2.80935 | gap 1 GGCCTCACCCCGTCA TTCCGGG-GCGCCCGC GCA GCGGGCGAACCCGGAA TCTCGTCGCTACAAT RPA1998 2248843 - 2248974 + | hypothetical protein TERM 1670 2249458 - 2249435 - g 77 -10.2 -4.00038 | gap 1, opp_overlap 2249450 2249454 CACCACGATGACAAA GTCGCTGGCGG ATT CCGCC-GCGCC CGGAGCTTCCTCATG RPA1999 2248971 - 2249474 + | GCN5-related N-acetyltransferase leuA 2249471 - 2251069 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 1671 2251117 - 2251147 + F 100 -21.9 -4.41348 | GACAGTTCTGCGTAA GGGCGTACCGCCG AGATC CGGCGGTGCGCCC TTTGTTTGCGCGGCG TERM 1672 2251982 - 2252014 + G 70 -3.9 -4.56775 | overlap 2251984 GCAGACCGAACTCGG TGCCGGCCGCGTGCC GCT GGAACGCATCCCGTA TTTTTCAGAGCAGAT TERM 1673 2252059 - 2252090 + G 71 -2.9 -4.64766 | gap 1, overlap 2252060 2252068 AAGACGTGGAGCAAC TGATCCTGGTCGGC GCCAA GCCG-CCGGTGTCG TTTTTCGCCTATCCC RPA2001 2251263 - 2252807 + | hypothetical protein RPA2002 2252819 - 2254228 + | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal RPA2003 2256322 - 2254253 - | cytochrome c precursor TERM 1674 2254358 - 2254393 + g 83 -9.7 -4.33417 | CGCGACGTCGACCGC TTCCTGATCGGACAG CTCACC CTGGCCGAGCGGGAA TTTGTTGTGGCTCGC RPA2004 2257140 - 2256505 - | hypothetical protein TERM 1675 2257717 - 2257732 + G 73 -9 -3.92641 | TGGCGTACCGTACCT TCGTGC ACAT GCACGA TTTGTCGCTGCGGTT RPA2005 2257299 - 2259254 + | multidrug ABC transporter psd 2259303 - 2260001 + | phosphatidylserine decarboxylase pssA 2260031 - 2260945 + | CDP-diacylglycerol--serine O-phosphatidyltransferase RPA2008 2261081 - 2261800 + | hypothetical protein RPA2009 2262032 - 2262805 + | MotA/TolQ/ExbB proton channel TERM 1676 2263648 - 2263629 - g 70 -10.6 -3.55444 | opp_overlap 2263641 CGCTGATGCGTGAAA GCCCGGCG CTGC CGCCCGGC ATGAAGCCGTAGGCG motB1 2262836 - 2263660 + | putative chemotaxis protein motB1 TERM 1677 2264781 - 2264820 + G 80 -15 -3.37796 | gap 1, overlap 2264782 GCTGATGGCGACGGC GGCGACGGTGATCGCCAGC CAG GC-GGTGATCACCGGCGCA TTCTCGCTGATCAGC TERM 1678 2264782 - 2264819 + G 87 -18.5 -2.62463 | gap 1, overlap 2264781 CTGATGGCGACGGCG GCGACGGTGATCGCCAGC CAG GC-GGTGATCACCGGCGC ATTCTCGCTGATCAG RPA2011 2263810 - 2265765 + | puative potassium uptake protein Kup RPA2012 2265975 - 2266301 + | rhodanese-like protein RPA2013 2266324 - 2267481 + | hypothetical protein RPA2014 2267489 - 2268604 + | extracellular solute-binding protein, family 1 RPA2015 2268717 - 2269856 + | hypothetical protein RPA2016 2271830 - 2269872 - | methyltransferase related protein RPA2017 2273049 - 2272117 - | lipid A biosynthesis lauroyl acyltransferase RPA2018 2274071 - 2273049 - | alcohol dehydrogenase RPA2019 2275448 - 2274168 - | 3-oxoacyl-(acyl carrier protein) synthase II RPA2020 2276667 - 2275459 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1679 2275670 - 2275709 + g 79 -13.5 -3.73224 | opp_overlap 2275705, overlap 2275660 AACGGCGTCGCGGTG CCGCGTACCGGCGCATT GGCGTG ATTGCGCAGGAACGCGG TTTCCTCGGCGGTCA RPA2021 2277130 - 2276660 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ RPA2022 2277437 - 2277156 - | acyl carrier protein TERM 1680 2277555 - 2277571 + r 78 -10.1 -4.07568 | opp_overlap 2277555 2277556, overlap 2277545 2277556 TCAATGGCGGGCAAA TCCACGC CTT GCGTGGG TTTTGAGCAACCGAC RPA2023 2277957 - 2277604 - | hypothetical protein RPA2024 2278154 - 2278777 + | hypothetical protein RPA2025 2279266 - 2278805 - | Mg2+ transporter TERM 1681 2279712 - 2279731 + Gr 82 -11.4 -4.04206 | AGGACCTGAATTTCC CGGCAGCG GGAG CGCTGTCG TTTGTCTGCGCGTCG TERM 1682 2280795 - 2280776 - gR 74 -5.7 -4.5032 | gap 1 GACAGCAACAACAAA TCGGC-CG CCATC CGTGCCGA GTACGATCTGACCGA RPA2027 2283771 - 2282020 - | hypothetical protein RPA2026 2279693 - 2282260 + | ferric siderophore receptor RPA2028 2284104 - 2284685 + | hypothetical protein serB 2285441 - 2284710 - | putative phosphoserine phosphatase TERM 1683 2285625 - 2285650 + G 82 -16.1 -3.28712 | GGAAGGTCCGGAACG GCACGGCCGGC GGCC GGCGGCCGTGC TTATCGCAGGGCCGA miaA 2285587 - 2286552 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1684 2286813 - 2286829 + F 100 -7.2 -5.4833 | CGGACGGTGCGCTGA GGGCCT TCGAC GGGCCC TTTTTTATTGCCTGA TERM 1685 2287521 - 2287508 - g 73 -9.5 -3.9461 | overlap 2287505 CGTGCCGAACAAGAA GGGCG ATCC CGCCC AGATCCGTAAGGCCG ilvI 2286918 - 2288696 + | acetolactate synthase 3 catalytic subunit TERM 1686 2288826 - 2288807 - f 77 -15 -2.9155 | overlap 2288802 CCCTGGAATACTAGA TCCCCCGC CTTC GCGGGGGA TGACGGTGGGCGAGT ilvH 2288912 - 2289454 + | acetolactate synthase 3 regulatory subunit RPA2033 2289856 - 2289458 - | putative AtsE RPA2034 2290068 - 2290943 + | DMT family permease ilvC 2291138 - 2292157 + | ketol-acid reductoisomerase TERM 1687 2292346 - 2292369 + F 100 -19.6 -5.01811 | opp_overlap 2292340 TACAGCCAATGCGAA CGGGACCGCG GTGA CGCGGTCCCG TTTTTCGTTTGGTGC RPA2036 2292447 - 2293175 + | GntR family transcriptional regulator TERM 1688 2293197 - 2293181 - f 71 -13.7 -2.63089 | overlap 2293180 2293178 TACCACCTGAAACAC GCGCGTC CCT GACGCGC CACAACAGCCCCGGT RPA2037 2293274 - 2294506 + | periplasmic binding protein TERM 1689 2294554 - 2294510 - f 100 -19.2 -3.65046 | opp_overlap 2294511, overlap 2294511 GCGGGACGGTAACAA CGCTTCGGCCTGCCGCGCGG TTCGG CCGCGCGGCAGGCCCGATCA ACTGTCATGCAACGG TERM 1690 2294553 - 2294511 - f 91 -20.5 -2.78813 | opp_overlap 2294511, overlap 2294510 CGGGACGGTAACAAC GCTTCGGCCTGCCGCGCGG TTCGG CCGCGCGGCAGGCCCGATC AACTGTCATGCAACG TERM 1691 2294511 - 2294556 + F 72 -13.4 -2.78384 | gap 3, opp_overlap 2294510 2294511 CGGGACGGTAACAAC GCT--TC-GGCCTGCCGCGCGGT TCG GCCGCGCGGCAGGCCCGATCAAC TGTCATGCAACGGGA TERM 1692 2294567 - 2294590 + F 100 -16 -4.82667 | opp_overlap 2294567 TCAACTGTCATGCAA CGGGATCGCG GTGA CGCGGTCCCG TTTTTGCTGTGATAG TERM 1693 2294590 - 2294567 - f 75 -13.8 -3.06831 | opp_overlap 2294567 TCAACTGTCATGCAA CGGGATCGCG GTGA CGCGGTCCCG TTTTTGCTGTGATAG RPA2038 2294633 - 2295487 + | short-chain dehydrogenase/reductase SDR RPA2039 2297137 - 2295590 - | substrate-binding region of ABC-type glycine betaine transport system RPA2040 2297742 - 2297134 - | choline ABC transporter ATP-binding subunit RPA2041 2297977 - 2298837 + | ABC-transport protein, ATP-binding protein TERM 1694 2299150 - 2299174 + G 70 -8.5 -4.02817 | GACCACTGTGCCGAT CGCCGGCAG GCTGCTG CTGCCGCCG TTCTTCTTCTCGACA RPA2042 2299064 - 2299858 + | putative ABC transporter, permease protein RPA2043 2299917 - 2300939 + | putative ABC transporter, periplasmic substrate-binding protein RPA2044 2300947 - 2301663 + | hypothetical protein TERM 1695 2301674 - 2301710 + T 100 -20.2 -4.42639 | overlap 2301676 2301677 ACTGATGACTTGCCG GCTCGTCATGGCCGGG ATGAA CCCGGCCATGACGGTC TTTTGGTTCGCGTCT TERM 1696 2301676 - 2301708 + T 100 -21.4 -3.81651 | overlap 2301674 2301677 TGATGACTTGCCGGC TCGTCATGGCCGGG ATGAA CCCGGCCATGACGG TCTTTTGGTTCGCGT TERM 1697 2301677 - 2301707 + T 100 -22.7 -2.88268 | overlap 2301676 2301674 GATGACTTGCCGGCT CGTCATGGCCGGG ATGAA CCCGGCCATGACG GTCTTTTGGTTCGCG bioB 2302735 - 2301725 - | biotin synthase TERM 1698 2303056 - 2303042 - H 74 -12.8 -3.37344 | TCGGGATGGAAGGAA CGGCGG TTA CCGCCG CGTCCGCGATTCCGG leuI 2303251 - 2304825 + | 2-isopropylmalate synthase TERM 1699 2304907 - 2304884 - f 81 -13.9 -3.55622 | opp_overlap 2304884 2304895 TGGAACGGTTCGAAA GGGCGATGC CGCTGT GCATCGCCC TTTTTCCGCGCTGCA TERM 1700 2304884 - 2304907 + F 100 -13.9 -4.58395 | opp_overlap 2304884, overlap 2304895 TGGAACGGTTCGAAA GGGCGATGC CGCTGT GCATCGCCC TTTTTCCGCGCTGCA TERM 1701 2305886 - 2305873 - g 70 -3.7 -4.48987 | GTCGCAGAAGGAAAA CGCGG AAGC CCTCG AGGAGATGAAGAAGT dctP1 2305049 - 2306053 + | TRAP dicarboxylate family transporter DctP subunit TERM 1702 2306102 - 2306054 - f 74 -11.6 -3.39895 | gap 1, opp_overlap 2306059 2306065, overlap 2306057 GGCCCGACCAAGTAA CATTTGCGAACGGGCGCCCGCGT TCCG ACGCGGGCGCCCTCT-GCTTTTG CCGGACCGCAGGGGC TERM 1703 2306059 - 2306097 + F 100 -18.9 -4.07568 | gap 1, opp_overlap 2306057 2306054, overlap 2306065 GACCAAGTAACATTT GCGAACGGGCGCCCGCGT TCCG ACGCGGGCGCCC-TCTGC TTTTGCCGGACCGCA TERM 1704 2306065 - 2306092 + F 100 -24.2 -3.09823 | opp_overlap 2306057 2306054, overlap 2306059 GTAACATTTGCGAAC GGGCGCCCGCGT TCCG ACGCGGGCGCCC TCTGCTTTTGCCGGA TERM 1705 2306242 - 2306266 + G 73 -14.3 -3.15861 | TCTGATTGCCACGAT GATCGGCGGCG CCA CGCTGCTGATC TTCATCGCGGTGATG dctQ1 2306192 - 2306776 + | TRAP dicarboxylate family transporter DctQ subunit TERM 1706 2307725 - 2307702 - g 72 -5.2 -4.41494 | overlap 2307705 GATGGCCAACGAAAA CATCCCGCAA CAGA TCGCGAGCTG GATGTCGACTGCGGG dctM1 2306773 - 2308098 + | TRAP dicarboxylate family transporter DctM subunit TERM 1707 2308197 - 2308240 + F 74 -11.8 -3.40403 | overlap 2308198 CGCCGGGCAGGGCGC TCATCTTCATGGCTACCTTT TGAA GGAGGTTGCCATGAAGAAGG TTCTGCTCGCCGGCG TERM 1708 2308610 - 2308595 - g 79 -4.6 -4.71426 | overlap 2308597 CGGCGATGAAGAAAA TCGCCG ACGC CGCCGA CCCGCTCTACAAATC RPA2050 2308231 - 2308830 + | hypothetical protein TERM 1709 2309116 - 2309095 - f 78 -2.9 -5.08169 | gap 1, overlap 2309097 ACAGATGCGAAAAAA GTCGTCC-GC ATT GCTGGACATC CCCGGTGGGCTTTGC RPA2051 2309647 - 2312004 + | putative ornithine decarboxylase RPA2052 2311958 - 2312569 + | putative phophinothricin N-acetyltransferase RPA2053 2312691 - 2313050 + | hypothetical protein TERM 1710 2313950 - 2314004 + G 80 -14.1 -3.72576 | opp_overlap 2313953, overlap 2313953 CGGCTGGCGCCGCTA CAACGAGACCGGCGACGACGCCGTC CGCGT GTCGGTGTCGGTGCCGATCCCGCTG TTTGATCAGAACCAG TERM 1711 2314001 - 2313953 - g 75 -14.4 -3.28712 | opp_overlap 2313953 2313950 CTGGCGCCGCTACAA CGAGACCGGCGACGACGCCGTC CGCGT GTCGGTGTCGGTGCCGATCCCG CTGTTTGATCAGAAC RPA2054 2313105 - 2314376 + | outer membrane protein precursor CzcC TERM 1712 2314396 - 2314433 + G 75 -11.9 -3.66178 | gap 1, overlap 2314395 2314398 ACCGTTGATGTTGAT CTGCGGTGCCG-CCGCGA TGT TTGCGCTCGGCGCCGCTG TTTCCGCTTACGCGC TERM 1713 2314398 - 2314431 + G 75 -13.1 -3.41222 | gap 1, overlap 2314395 2314396 CGTTGATGTTGATCT GCGGTGCCG-CCGCGA TGT TTGCGCTCGGCGCCGC TGTTTCCGCTTACGC RPA2055 2314373 - 2315368 + | RND divalent metal cation efflux membrane fusion protein CzcB precursor czcA2 2315398 - 2318613 + | RND divalent metal cation efflux transporter CzcA RPA2057 2318610 - 2318978 + | hypothetical protein RPA2058 2319308 - 2319039 - | hypothetical protein TERM 1714 2319377 - 2319363 - R 74 -2.7 -4.86731 | GGGGCGCAAACAAAA GCGGC GATGT GACGC GCTCTCAGGACCGCT RPA2059 2320281 - 2319382 - | hypothetical protein TERM 1715 2321438 - 2321450 + G 72 -6.9 -4.27512 | GGGCGCGCCGGATTT CCCGG AGA TCGGG TTGTTTCTTGTGCCG nosR 2320449 - 2322716 + | regulatory protein NosR nosZ 2322735 - 2324672 + | nitrous-oxide reductase nosD 2324675 - 2326039 + | putative periplasmic ABC transport copper binding protein nosF 2326036 - 2326941 + | putative NosF protein (an ABC transporter) TERM 1716 2327099 - 2327126 + G 82 -12.8 -3.96624 | overlap 2327080 GGCGCTCGACGTGGT GATCGTCAGCCT GTCG AGCCTGACGATC TTTCTGCTGCCGCTG nosY 2326938 - 2327765 + | copper ABC transporter permease nosL 2327762 - 2328313 + | hypothetical protein TERM 1717 2329046 - 2329020 - g 70 -10.9 -3.57144 | gap 1, opp_overlap 2329019 TGGCCGATCCGGAAA CGACGAGTGCCA ACCT CGGCAC-CGTCG ATCTGGTTGACCGCG nosX 2328326 - 2329324 + | putative nosX RPA2067 2329360 - 2329830 + | hypothetical protein RPA2068 2329917 - 2330204 + | hypothetical protein TERM 1718 2330223 - 2330269 + G 75 -2.7 -4.72272 | gap 1, opp_overlap 2330238, overlap 2330224 GCGCCAGCGGATTTC TCGGGTCAGC-CAAAAGCCGGC TGTT GCCGGCCTCGGTGCCGTTCCGG TTTTTCGTCGCCGCG TERM 1719 2330253 - 2330238 - g 91 -11.8 -4.18018 | opp_overlap 2330224 2330223 TCGGGTCAGCCAAAA GCCGGC TGTT GCCGGC CTCGGTGCCGTTCCG TERM 1720 2331368 - 2331417 + G 74 -12.7 -3.5774 | gap 1, overlap 2331370 2331386 ATCGTGCTCGACAGT GCTCAGCTCGCCGCCGGCGCCG CGGTGAT CGGCGCCGTAGGGGCGCTG-GC TTTCGCCGCTTACCT RPA2069 2330201 - 2331484 + | hypothetical protein RPA2070 2331496 - 2332005 + | hypothetical protein RPA2071 2332408 - 2332157 - | hypothetical protein RPA2072 2332651 - 2332505 - | 3-oxoacyl-acyl carrier protein reductase RPA2073 2333363 - 2332713 - | putative oxidoreductase TERM 1721 2333445 - 2333476 + r 72 -7.2 -4.13767 | gap 1, opp_overlap 2333445 GTCAGGTCTGGAACA GCGCGCTGATCACCG TTT CGG-GATCGGCCGGC TTTTCGCATCGGACG RPA2074 2333799 - 2333431 - | response regulator receiver (CheY-like protein) RPA2075 2335697 - 2333796 - | signal transduction histidine kinase RPA2076 2336811 - 2336125 - | putative signal transduction histidine kinase RPA2077 2337734 - 2336808 - | Crp/FNR family transcriptional regulator RPA2078 2337879 - 2338001 + | hypothetical protein RPA2079 2338189 - 2338308 + | hypothetical protein TERM 1722 2338338 - 2338358 + T 83 -12.5 -3.93061 | overlap 2338333 2338339 2338341 TCGATTGCAAGGCGG TGGCCGGGC TCA GCCCGGTCG TTTGCGTTTTGGGCT TERM 1723 2338339 - 2338357 + T 74 -13.8 -2.95113 | overlap 2338338 2338333 2338341 CGATTGCAAGGCGGT GGCCGGGC TCA GCCCGGTC GTTTGCGTTTTGGGC TERM 1724 2338341 - 2338355 + T 71 -12.8 -3.02204 | overlap 2338339 2338338 2338333 ATTGCAAGGCGGTGG CCGGGC TCA GCCCGG TCGTTTGCGTTTTGG RPA2080 2339704 - 2338535 - | zinc-containing dehydrogenase TERM 1725 2340700 - 2340657 - g 80 -15.3 -3.28712 | gap 2 CGCTGCGGTCGACAA GGCCGCGCTA-CGCG-CGCGG CAGA CCGCGTCACGGTGGCACGGCC GGGTACTGGCGCTGT RPA2081 2340151 - 2341086 + | Fe ABC transporter TERM 1726 2341085 - 2341126 + T 71 -13.1 -3.05844 | gap 1, overlap 2341087 CCGCGCCGCGGCAGT GAGCTGAGTCGTCATCGC CGGTCGC GCGCTGGCG-CTCAGCTC TCTTCCAATGCAGCA cobA 2341869 - 2341120 - | uroporphyrin-III C-methyltransferase cobB 2343230 - 2341869 - | cobyrinic acid a,c-diamide synthase cobM 2343996 - 2343217 - | precorrin-4 C11-methyltransferase CbiG 2344385 - 2343993 - | cobalamin biosynthesis protein G; CbiG cobL 2345605 - 2344382 - | precorrin-6y C5,15-methyltransferase, subunit CbiE TERM 1727 2345992 - 2346017 + Gr 76 -10.3 -3.87815 | ATCAGGCGGTGGGCG CGCTCGGCGCG GCGC CGCGGCGGGTG TTTCTCGGCATCGGC TERM 1728 2346240 - 2346218 - gR 70 -10.4 -3.61398 | overlap 2346202 2346203 CGTCGTCGCCAAGAA CGCCGGCGGC GAG GCTGCCGTCG CCAAGATCACCGCGG cobK 2345604 - 2346386 + | cobalt-precorrin-6x reductase cobJ 2347114 - 2346353 - | precorrin-3B C17-methyltransferase TERM 1729 2346655 - 2346642 - G 70 -3.7 -4.4648 | opp_overlap 2346648 2346649, overlap 2346643 2346644 AGCGCGATCACAAAA TCGGC CTCG GCCGC CGCGCGCAGCCGCTT cobI 2347839 - 2347111 - | precorrin-2 C20-methyltransferase cobH 2348465 - 2347836 - | precorrin-8X methylmutase RPA2091 2349025 - 2348462 - | hypothetical protein RPA2092 2350562 - 2349426 - | citrate utilization protein B RPA2093 2351847 - 2350549 - | tricarballylate dehydrogenase TERM 1730 2353218 - 2353269 + G 75 -13.7 -3.22894 | gap 3, overlap 2353231 2353232 2353263 TGATCGATGGTTTCA TCGCCAGCGCGGCGGCGCTGCTCGCG GTG CGGCTGCAGC-CCGCCGCGC-G-CGA TTACTGCGTGTTCTC cobT1 2352419 - 2353483 + | putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase RPA2095 2353480 - 2354250 + | cobalamin (5`-phosphate) synthase TERM 1731 2354410 - 2354383 - g 71 -14.8 -2.54896 | overlap 2354379 CCCGGATCCAATTCA CGCCGCGCACCA CCAC CGGTCCGCGGCG CGCCCGCTCGCTGAT cobQ2 2354337 - 2355911 + | cobyric acid synthase TERM 1732 2356544 - 2356526 - g 73 -12.4 -3.35224 | opp_overlap 2356525 2356524, overlap 2356524 AGACCTTCGCAAAGA TCGACGCC GAG GGCGCCGA GATCTTCTGGGCCGC cobF 2355943 - 2356707 + | precorrin 6A synthase TERM 1733 2356819 - 2356779 - f 90 -13.4 -4.10161 | opp_overlap 2356787 GAGCATCCGCCAAAA CCACGC-AATCGACGTCGCG CGT CGCG-CGTCGATTTGAGCGG GGCCGACATGAACAG TERM 1734 2356787 - 2356810 + F 76 -13.2 -3.53012 | gap 1, opp_overlap 2356779 GCCAAAACCACGCAA TCGACGTCGCG CGT CGCG-CGTCGA TTTGAGCGGGGCCGA RPA2098 2356827 - 2357591 + | glutamine amidotransferase class-I RPA2099 2359245 - 2357596 - | MFS family diterpenoid transporter TERM 1735 2357802 - 2357785 - G 74 -10.5 -3.86822 | GAAGGTCTCGACAAA GCGGCCA GGAT CGGCCGC ATCCTCGAATACGCC TERM 1736 2358728 - 2358688 - G 72 -6.8 -4.18018 | overlap 2358689 CGCGTTGATCCAAAA TGGCGCGGCGATGCCA-AGG CTG CCGATCGCAACGCCGC-CCA GCGCCGGACCGATCG TERM 1737 2358859 - 2358832 - G 80 -14 -3.67296 | overlap 2358847 2358848 CACGATCGATTGAAA CGCCGGGGCAGC AAAG GCGGCGCCGGCG CCGAGCAGGAAGGTG RPA2100 2359573 - 2360223 + | hydrolase TERM 1738 2360309 - 2360362 + F 83 -14.6 -3.40403 | gap 3, opp_overlap 2360313 TCATCTACAGCCTGA TCAACGTGC-GCTCG-CCGGCGCCACC TCT GGTGGCGCTGGTCGGGCTGCTCGG-GA TTCTGGTCGGCGAGC TERM 1739 2360359 - 2360313 - f 86 -16.5 -3.16191 | gap 2, opp_overlap 2360309 CTACAGCCTGATCAA CGTGC-GCTCG-CCGGCGCCACC TCT GGTGGCGCTGGTCGGGCTGCTCG GGATTCTGGTCGGCG RPA2101 2360535 - 2362415 + | hypothetical protein RPA2102 2362417 - 2362842 + | hypothetical protein RPA2103 2362862 - 2363782 + | hypothetical protein RPA2104 2363779 - 2365212 + | hypothetical protein TERM 1740 2365268 - 2365226 - T 89 -12.5 -4.21462 | opp_overlap 2365228 2365231, overlap 2365227 AGGCATCAGGCAAAA CGCGACGGCCCGGCGCGAC GATCT GTCGGGCCGGGCCGCTGTT TGGATACTGCGGAGT TERM 1741 2365267 - 2365227 - T 86 -16 -3.12395 | opp_overlap 2365228 2365231, overlap 2365226 GGCATCAGGCAAAAC GCGACGGCCCGGCGCGAC GATCT GTCGGGCCGGGCCGCTGT TTGGATACTGCGGAG TERM 1742 2365228 - 2365266 + T 100 -20.2 -3.68351 | opp_overlap 2365227 2365226, overlap 2365231 GCATCAGGCAAAACG CGACGGCCCGGCGCGACG ATC TGTCGGGCCGGGCCGCTG TTTGGATACTGCGGA TERM 1743 2365231 - 2365263 + T 100 -22.7 -2.65116 | opp_overlap 2365227 2365226, overlap 2365228 TCAGGCAAAACGCGA CGGCCCGGCGCGACG ATC TGTCGGGCCGGGCCG CTGTTTGGATACTGC RPA2105 2366127 - 2365285 - | non-heme chloroperoxidase RPA2106 2367043 - 2366342 - | hypothetical protein RPA2107 2372346 - 2367208 - | sensor histidine kinase RPA2108 2372719 - 2372333 - | response regulator receiver (CheY-like protein) RPA2109 2373443 - 2372808 - | two-component LuxR family transcriptional regulator RPA2110 2373680 - 2374288 + | AraC family transcriptional regulator RPA2111 2376253 - 2374328 - | sigma-54-dependent transcriptional regulator TERM 1744 2375350 - 2375396 + g 74 -7.9 -4.26076 | AGTCGTTTTCGAGCT GCAGC-CGCTCGCGCAGGCGG TCGACTT CGGCCAGCGC-AGCGTGCAGC TTTTCGTCGGCCTCG TERM 1745 2375468 - 2375437 - G 70 -11.4 -3.37487 | opp_overlap 2375448, overlap 2375435 TGACATCGCGAAACA CCACGACGGCGCCG ACCA CGCCGCCGCTGCGG TCGTGGATCGGTGTT TERM 1746 2375448 - 2375479 + g 72 -13.1 -3.09648 | gap 2, opp_overlap 2375435 2375437 AACACCACGACGGCG CCGA-CCACG-CCGC CGCT GCGGTCGTGGATCGG TGTTGAGGTGTATTC TERM 1747 2376642 - 2376675 + G 81 -7.9 -4.59773 | overlap 2376644 CTTTCTGAAGTCGGT CGGCGCTGCCACGGC ACTC GCCGCGGTGTCGCAG TTTTTCCCCCTGCAG nrtA 2376415 - 2377803 + | putative nitrate transporter component, nrtA TERM 1748 2377853 - 2377810 - f 76 -10.8 -3.75153 | gap 1, overlap 2377811 GCCTCGTAACGGAAA GGGGACCGGCGGCGGCATGTT TGG ATCTCTCCGCCGCCGG-CCGC GTCCCCGAACGATGA TERM 1749 2377853 - 2377811 - f 70 -13.2 -2.84878 | overlap 2377810 CCTCGTAACGGAAAG GGGACCGGCGGCGGCATGTT TGG ATCTCTCCGCCGCCGGCCGC GTCCCCGAACGATGA nrtB 2377950 - 2378789 + | nitrate transport system permease protein nrtC1 2378795 - 2379682 + | putative nitrate transport system ATP-binding protein cynS 2379725 - 2380213 + | cyanate hydratase TERM 1750 2380271 - 2380311 + T 73 -11.1 -3.57792 | gap 1, opp_overlap 2380269, overlap 2380272 ATCACGTATCAGATC TGCCGTGGCGTCG-CTCC CATCGA GGAGATGTCGCCACGGCC TTTCGCGATCAGTGG TERM 1751 2380272 - 2380310 + T 75 -14.6 -2.74461 | gap 1, opp_overlap 2380269, overlap 2380271 TCACGTATCAGATCT GCCGTGGCGTCG-CTCC CATCGA GGAGATGTCGCCACGGC CTTTCGCGATCAGTG RPA2116 2380736 - 2380320 - | hypothetical protein RPA2117 2381197 - 2380715 - | flavodoxin FldA TERM 1752 2380778 - 2380816 + g 70 -11 -3.54129 | gap 1, overlap 2380813 TGATTGGCCGTCCTC GTCGAGCGCGA-GGCCG ACGAAG CGGCCGTCGCGTTCCGC TTTGGAGGCGGTGTA TERM 1753 2381349 - 2381332 - R 76 -9.1 -4.09739 | gap 1, opp_overlap 2381332 2381331 2381329 TGAACCGGTCCAAAA CCG-CCCG CGT CGGGACGG CTGTTACTTAGAATG RPA2118 2382206 - 2381400 - | hemin importer ATP-binding subunit RPA2119 2383285 - 2382203 - | transport system permease protein TERM 1754 2382952 - 2382932 - G 88 -16.1 -3.72576 | GGCGGCCGCACCAAA GGCGCCGCC GCT GGCGACGCC GACCAGCGCCGGGTC RPA2120 2384253 - 2383282 - | periplasmic binding protein RPA2121 2384453 - 2384250 - | hypothetical protein TERM 1755 2384567 - 2384539 - H 73 -8.8 -4.03093 | TATAATTACTATAAA CGGCGCGATC GGCGCTTGA GCTCGCGCCG CGCTGCATCGTAACG RPA2122 2384786 - 2386246 + | coproporphyrinogen III oxidase RPA2123 2386234 - 2386905 + | hypothetical protein TERM 1756 2387059 - 2387028 - f 73 -3.1 -4.72272 | gap 2, opp_overlap 2387033 2387051, overlap 2387033 CTCGGTTACCAAAAA TGCAAGCCGTTAGCA GTTG TGCTGACGGC-TG-A TTGCCAGCCAGCCGC TERM 1757 2387056 - 2387033 - f 71 -11 -3.47218 | opp_overlap 2387033 2387051, overlap 2387028 TTACCAAAAATGCAA GCCGTTAGCA GTTG TGCTGACGGC TGATTGCCAGCCAGC RPA2124 2387123 - 2389462 + | tonB dependent iron siderophore receptor RPA2125 2389539 - 2389871 + | antibiotic biosynthesis monooxygenase RPA2126 2389888 - 2390424 + | hypothetical protein TERM 1758 2390683 - 2390657 - g 72 -13.6 -3.07994 | opp_overlap 2390668 GCGAAGTCGATCGAA CTGCGCCGCAGC GTT GCGGTGGCGCAG CGTGGTCTCGAAAGG exbB3 2390417 - 2391214 + | putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicins exbD3 2391220 - 2391657 + | biopolymer transport protein ExbD/TolR RPA2129 2391654 - 2392511 + | energy transducer TonB, C-terminal region RPA2130 2394370 - 2393564 - | hypothetical protein TERM 1759 2393614 - 2393602 - G 71 -3.3 -4.67982 | opp_overlap 2393604, overlap 2393603 2393604 CCGCAGCGAACAAAA CCGCT GCC AGCGC GATCTGCAGCTTTCG RPA2131 2394921 - 2396003 + | hypothetical protein TERM 1760 2396958 - 2397004 + G 71 -12.8 -3.33696 | ATCTGCAGCAAACCT CGGTGGCGCCGGCGGTGAAGCG TGC CGCGACATCGCTGTCGTCGTCG TTCATTGCGCCAGCC RPA2132 2396132 - 2397517 + | hypothetical protein TERM 1761 2397933 - 2397876 - g 70 -8.3 -3.90744 | gap 1, opp_overlap 2397884, overlap 2397873 2397877 GCGTTCGCCAAAGAA CTCGCGCGGCACGGCGAATACATCAAAA CCG TCGTGCTGAATTCGCCGGGCGGCTCG-G TATCCGATGCGCTGG RPA2133 2397522 - 2398313 + | hypothetical protein RPA2134 2398474 - 2398917 + | hypothetical protein TERM 1762 2398961 - 2398921 - T 72 -14 -2.72344 | gap 1, opp_overlap 2398914 CGTCATTGGTAATCA TGCGATCGGGCGGGGCTGC AACT GCGCCCCCGCCCGATCA-A TAGGGTAAAGTTTAG RPA2135 2401096 - 2398973 - | sensor histidine kinase TERM 1763 2399444 - 2399432 - G 85 -10.5 -4.22748 | overlap 2399427 CAGGAACAAATCAAA CCGCG TGC CGCGG CCTAGGTCGCTGTCG RPA2136 2401317 - 2401631 + | cytochrome C precursor TERM 1764 2401791 - 2401757 - g 71 -12.8 -3.34043 | opp_overlap 2401757 2401758, overlap 2401758 CTCACCATTCTACAA TGCGGACCACATCGCG TTT CGCGACGTGATCCGGC GTTTCGTCCAGAATG TERM 1765 2401757 - 2401792 + G 70 -10.4 -3.73224 | gap 1, opp_overlap 2401757 2401758, overlap 2401758 CTCACCATTCTACAA TG-CGGACCACATCGCG TTT CGCGACGTGATCCGGCG TTTCGTCCAGAATGA TERM 1766 2401790 - 2401758 - g 77 -16.3 -2.60212 | opp_overlap 2401757 2401758, overlap 2401757 TCACCATTCTACAAT GCGGACCACATCGCG TTT CGCGACGTGATCCGG CGTTTCGTCCAGAAT RPA2137 2401734 - 2402873 + | acyl-CoA dehydrogenase TERM 1767 2402969 - 2402919 - f 91 -20.7 -2.54896 | gap 1, overlap 2402923 TTGCGACCGAAGGGA GCAAGTCCGGAATCCATAACC-CC TGTC GGTGATTATGGATTCCGGGCTCGC GCTGCGCGCGCCCCG TERM 1768 2402965 - 2402923 - f 86 -16.5 -3.22388 | gap 1, overlap 2402919 GACCGAAGGGAGCAA GTCCGGAATCCATAACC-CC TGTC GGTGATTATGGATTCCGGGC TCGCGCTGCGCGCGC RPA2138 2403023 - 2404177 + | putative acyl-CoA dehydrogenase RPA2139 2404371 - 2405069 + | glutathione S-transferase RPA2140 2405234 - 2406058 + | AraC family transcriptional regulator RPA2141 2406179 - 2407045 + | hypothetical protein RPA2142 2407213 - 2408817 + | putative fatty-acid--CoA ligase TERM 1769 2409224 - 2409203 - g 71 -12.3 -3.29144 | gap 1 CGAGCGCTTCCACAA GCGCGGTCAG CTG CTG-CCGCGC GAGCGCGTCGCGCTG RPA2143 2409057 - 2410679 + | propionyl-CoA carboxylase RPA2144 2410676 - 2412658 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 1770 2412744 - 2412699 - f 75 -13.4 -3.09635 | gap 2, opp_overlap 2412707 2412711, overlap 2412703 2412711 ATTGCGAGGAGCGAA CCGACGAAGCAATCCAGCGCCG CGCA CGCCGCTGGA-TGCTTCG-CTG CGCTCGCAATGACGA TERM 1771 2412741 - 2412703 - f 86 -18.3 -2.55544 | gap 1, opp_overlap 2412707 2412711, overlap 2412699 2412711 CGAGGAGCGAACCGA CGAAGCAATCCAGCGCCG CGCA CGCCGCTGGA-TGCTTCG CTGCGCTCGCAATGA TERM 1772 2412734 - 2412711 - f 74 -12.4 -3.41581 | opp_overlap 2412707 2412711, overlap 2412703 2412699 GAACCGACGAAGCAA TCCAGCGCCG CGCA CGCCGCTGGA TGCTTCGCTGCGCTC RPA2145 2412778 - 2413557 + | enoyl-CoA hydratase TERM 1773 2413588 - 2413641 + F 83 -15.9 -3.14132 | overlap 2413566 2413592 2413597 2413622 ATTCCGGGGCGCGCG GAGCGCGAACCCGGAATCCCGAGGT TGTG GCGGCGAGATTCCGGGTTCGCTCAC TTCGTGAGCGCCCCG TERM 1774 2413592 - 2413637 + F 86 -18.3 -2.56596 | overlap 2413566 2413588 2413597 2413622 CGGGGCGCGCGGAGC GCGAACCCGGAATCCCGAGGT TGTG GCGGCGAGATTCCGGGTTCGC TCACTTCGTGAGCGC TERM 1775 2413712 - 2413689 - f 70 -11.7 -3.16217 | gap 1, overlap 2413687 GACGAAGACCTAACA GCCACGCCGC AGCAA GCGGCG-GGC ACAGGCAGGGAGGAA RPA2146 2413733 - 2415271 + | putative long-chain-fatty-acid--CoA ligase TERM 1776 2416410 - 2416467 + G 77 -16.3 -2.61602 | gap 1, overlap 2416415 2416416 GCACCGCCGGCTTGG GCCGGCGTCGTCGCGGTGATCGCG ATCATCGCCGC CACGATCGCCGCGGCGCCGC-GGC TGCATTATCGCTTCG RPA2147 2415426 - 2416820 + | hypothetical protein RPA2148 2418184 - 2416916 - | beta-lactamase TERM 1777 2417954 - 2417968 + g 75 -11.4 -3.75629 | opp_overlap 2417936 GCGGAAGATGGTGTC GTCGCG CAC CGCGAC TTTGCGTTCGACATC TERM 1778 2418912 - 2418898 - g 71 -9.2 -3.88291 | TACGATTCTCAGAAA CCCGGC TAT GCCGAG CAGGGCCCGTCGCTG RPA2149 2418328 - 2419320 + | putative hydroxyquinol 1,2-dioxygenase TERM 1779 2419497 - 2419552 + G 77 -3.1 -4.84642 | gap 2, overlap 2419498 CGATACGGCCGAGAT GTATGGCGACGCCGAGCCGCTGGTCGC TGAG GCGATTGCCGGC-CGGCG-CGACGAAG TTTTCTTGGTTTCGA TERM 1780 2419974 - 2420016 + G 100 -19.1 -3.85698 | gap 1, opp_overlap 2419973 GCTGCTGCAGAGCAT CGCCGGCGCC-CATGGCGCG AAGC CGCGGCAGGTGGCGCTGGCG TTTCTGACCCGGCGG RPA2150 2419351 - 2420184 + | putative oxidoreductase TERM 1781 2420418 - 2420474 + G 95 -17.3 -3.90318 | gap 1, opp_overlap 2420420 GTGCGCCGGCTCACA CACCGTCATGCCGACCATCCGCTGCG CGGCAT CGC-GCTGATCGTCGGCTCGACGGTG TTTCTCGCCTGCTCG TERM 1782 2420472 - 2420420 - g 79 -16.3 -2.87132 | gap 1, opp_overlap 2420418 GCGCCGGCTCACACA CCGTCATGCCGACCATCCGCTGCG CGGCAT CGC-GCTGATCGTCGGCTCGACGG TGTTTCTCGCCTGCT RPA2151 2420403 - 2421317 + | DMT family permease RPA2152 2421412 - 2423541 + | diguanylate cyclase/phosphodiesterase RPA2153 2423788 - 2425218 + | aldehyde dehydrogenase TERM 1783 2425223 - 2425267 + F 74 -12.8 -3.29096 | gap 1, overlap 2425224 ACGCCGCGTAACTGC AACTGCG-CGATGCCGGGGCC GTCC GGTTCCGGCATCGCCGCGGGG TTAATGATTAATACG TERM 1784 2425224 - 2425266 + F 80 -16.3 -2.57136 | gap 1, overlap 2425223 CGCCGCGTAACTGCA ACTGCG-CGATGCCGGGGCC GTCC GGTTCCGGCATCGCCGCGGG GTTAATGATTAATAC RPA2154 2425291 - 2426538 + | putative acyltransferase ilvD3 2426865 - 2428571 + | dihydroxy-acid dehydratase RPA2156 2428854 - 2428576 - | hypothetical protein RPA2157 2429253 - 2430449 + | hypothetical protein RPA2158 2430585 - 2430914 + | hypothetical protein TERM 1785 2430947 - 2430970 + T 81 -16.8 -2.80074 | opp_overlap 2430941 2430949, overlap 2430944 2430943 2430949 CCTCTGAAATGCGAA GAGGGCGGAT GGAG ATCCGCCCTC TGATGTTGTGGCGGA TERM 1786 2430968 - 2430949 - T 76 -13.6 -3.12668 | opp_overlap 2430947 2430944 2430943 2430949, overlap 2430941 TCTGAAATGCGAAGA GGGCGGAT GGAG ATCCGCCC TCTGATGTTGTGGCG TERM 1787 2430949 - 2430968 + T 74 -13.6 -2.94726 | opp_overlap 2430949 2430941, overlap 2430947 2430944 2430943 TCTGAAATGCGAAGA GGGCGGAT GGAG ATCCGCCC TCTGATGTTGTGGCG RPA2159 2431339 - 2431025 - | hypothetical protein TERM 1788 2431447 - 2431425 - R 71 -11.3 -3.53012 | gap 1, opp_overlap 2431426 2431427, overlap 2431427 CCGCGCGGCGGGAAA GACTCCGGCG CCGC CGCCGGAG-C TTTGAGCGCAGCCGC TERM 1789 2431426 - 2431447 + r 71 -11.5 -3.53012 | opp_overlap 2431425 2431427, overlap 2431427 CGCGCGGCGGGAAAG ACTCCGGCG CCGC CGCCGGAGC TTTGAGCGCAGCCGC TERM 1790 2431427 - 2431446 + r 75 -15 -2.71712 | opp_overlap 2431425 2431427, overlap 2431426 GCGCGGCGGGAAAGA CTCCGGCG CCGC CGCCGGAG CTTTGAGCGCAGCCG TERM 1791 2431446 - 2431427 - R 82 -15 -3.34398 | opp_overlap 2431427 2431426, overlap 2431425 GCGCGGCGGGAAAGA CTCCGGCG CCGC CGCCGGAG CTTTGAGCGCAGCCG RPA2160 2432214 - 2431465 - | short-chain dehydrogenase/reductase SDR RPA2161 2432327 - 2432641 + | ArsR family transcriptional regulator TERM 1792 2433013 - 2433001 - f 70 -7.7 -4.07885 | CACTGGGGGCTAAAA TTGCG GTG CGCAA CAAGATCATTTCCGA TERM 1793 2433143 - 2433178 + F 76 -9 -4.09685 | gap 1 CGAACGACACATTGC GCGGTCGAGCGAAC-GC TTA GCAGTTCGCTTCAACGC TTTTCCGACATCCGG TERM 1794 2433277 - 2433296 + F 78 -15 -3.01712 | CCTTCTGTTTGCTGA CGGCGTCG CCCA CGACGCCG TGTTGAGGCCGCAGC TERM 1795 2434987 - 2435008 + G 83 -8.7 -4.69053 | CACCTACATCCTCAC TGGCGACAC CAGC GTGTCGGCA TTTTATTCGCTGATC RPA2162 2433296 - 2436136 + | serine protease/outer membrane autotransporter TERM 1796 2436181 - 2436146 - T 74 -9 -3.89346 | gap 1, overlap 2436150 TTCTGAGCTGACAAA CCAAGCTGCCGGACG CGTTCAT CGTCCGGCAGCC-GC CGCACCTCGGTGCTT TERM 1797 2436178 - 2436150 - T 100 -17.5 -3.61244 | overlap 2436146 GAGCTGACAAACCAA GCTGCCGGACG CGTTCAT CGTCCGGCAGC CGCCGCACCTCGGTG RPA2163 2436882 - 2436196 - | SecC motif-containing protein TERM 1798 2437166 - 2437193 + r 73 -11.2 -3.59202 | opp_overlap 2437170, overlap 2437170 CGCTTGCGCCAACAA AAAAGCCCGGCG TTTC CGCCGGGCTTCG TTGTCTGTAGCGATG TERM 1799 2437170 - 2437189 + r 89 -16.4 -3.52316 | opp_overlap 2437170, overlap 2437166 TGCGCCAACAAAAAA GCCCGGCG TTTC CGCCGGGC TTCGTTGTCTGTAGC TERM 1800 2437189 - 2437170 - R 100 -16.4 -5.4505 | opp_overlap 2437170 2437166 TGCGCCAACAAAAAA GCCCGGCG TTTC CGCCGGGC TTCGTTGTCTGTAGC groEL 2438862 - 2437219 - | chaperonin GroEL groES 2439342 - 2439028 - | co-chaperonin GroES TERM 1801 2439229 - 2439241 + g 83 -9.1 -4.41494 | overlap 2439225 GACGGCGACGATCTC GCCCT GCG AGGGC TTTTCCTTGGCCGTG RPA2166 2439785 - 2440069 + | hypothetical protein RPA2167 2441895 - 2440210 - | hypothetical protein RPA2168 2443392 - 2442142 - | putative H+/nucleoside symporter TERM 1802 2443787 - 2443809 + G 76 -14.8 -3.15861 | GCCTAGCGAGCGCGA CTGCGCCGGC CGA GCCGGGGCAG TTGCTCAACATGCTG rlp1 2443567 - 2444673 + | ribulose-bisphosphate carboxylase-like protein; rubisco-like protein RPA2170 2444663 - 2445160 + | hypothetical protein RPA2171 2445677 - 2446480 + | hypothetical protein RPA2172 2447258 - 2446500 - | short-chain dehydrogenase/reductase SDR TERM 1803 2446961 - 2446992 + g 74 -12.2 -3.61398 | gap 1 CCAGCGGCAGATCCT CGAACGGCACCGGCG GCG CGCCGATGCCGG-CG TTGTTGAACAGCACG RPA2173 2447791 - 2447291 - | GCN5-related N-acetyltransferase TERM 1804 2447514 - 2447479 - G 74 -15.4 -2.60212 | opp_overlap 2447479, overlap 2447478 TGATCACCGCAGAAG CCGCGCCGCCGCCG CGCGCTTC CGGCAGCAGCGCGA TGTCGTGCAGATAAT RPA2174 2448556 - 2447810 - | putative proteasome-type protease TERM 1805 2448622 - 2448668 + r 100 -28.4 -4.21773 | opp_overlap 2448625 2448627 2448654 ATCGGCTGCGGGACA CTAGAGCATTTCCGGTTCTGAT AGA ATCAGAACCGGAAATGCTCCAG TTGTTTGTCTTGACG TERM 1806 2448665 - 2448625 - R 100 -28.7 -2.62184 | opp_overlap 2448622, overlap 2448627 2448654 GGCTGCGGGACACTA GAGCATTTCCGGTTCTGAT AGA ATCAGAACCGGAAATGCTC CAGTTGTTTGTCTTG TERM 1807 2448663 - 2448627 - R 100 -25.5 -2.85351 | opp_overlap 2448622, overlap 2448625 2448654 CTGCGGGACACTAGA GCATTTCCGGTTCTGAT AGA ATCAGAACCGGAAATGC TCCAGTTGTTTGTCT RPA2175 2449597 - 2448770 - | transglutaminase-like domain-containing protein TERM 1808 2449064 - 2449040 - G 78 -14.9 -3.25823 | overlap 2449025 GTGTCCGGACACGAA CCGGGCCGGCA CGC CGCCGGCGCGG GCGCAGGCGATGAAC RPA2176 2450591 - 2449647 - | hypothetical protein RPA2177 2452161 - 2450743 - | hypothetical protein TERM 1809 2451418 - 2451396 - G 72 -13.5 -3.13403 | overlap 2451394 TGGTGCGCATGAACA CCTCGTCGT TCTTG ACGACGAGG TCCCGGCCTTCGACC TERM 1810 2451604 - 2451646 + g 72 -8.4 -4.10657 | gap 1, opp_overlap 2451615 CGGCGCAATGCGGTG CCGCGCGAACA-GATCCGG AAACAG CCGCATCATGATCTCGCGG TTTTCCAGCATATAC RPA2178 2452385 - 2453122 + | molybdopterin binding domain RPA2179 2453243 - 2453797 + | xanthine-guanine phosphoribosyltransferase TERM 1811 2454341 - 2454355 + G 73 -12.8 -3.39449 | GGCGACCGCGCTCGC GGCCGG GCA CCGGCC TTGCTATTACTGCCG RPA2180 2454102 - 2454776 + | hypothetical protein RPA2181 2455993 - 2454971 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1812 2456322 - 2456349 + G 77 -15.6 -3.01712 | gap 1, opp_overlap 2456300, overlap 2456329 2456332 ATTGTGGATCATGCG CCGATCGGCGGCG GCG CGCCGCTG-TCGG TGTTCGAAAGCGGGG RPA2182 2456070 - 2456864 + | putative glutathione S-transferase RPA2183 2457284 - 2457904 + | DSBA oxidoreductase RPA2184 2457904 - 2458878 + | putative oxidoreductase TERM 1813 2458895 - 2458927 + F 100 -19.9 -3.59262 | opp_overlap 2458881 2458886 ACGGAATTTCACGCA CCCGCGGCGAGCGAA GAT TTCGCTTGGCGCGGG TTTCGCGATGTGGAA RPA2185 2458970 - 2459437 + | MaoC-like dehydratase RPA2186 2459456 - 2460373 + | short-chain dehydrogenase/reductase SDR TERM 1814 2460460 - 2460405 - f 95 -19.9 -3.31144 | opp_overlap 2460409, overlap 2460408 GGTCGAGTCGCAGAA CAACTCCG-GATTCCGGGTTCGCTCGC TGGC GCGAGCGC-CCCGGAATGACGGAGCTG GGACAAGGTCTCTCC TERM 1815 2460457 - 2460408 - f 100 -18 -3.79906 | opp_overlap 2460409, overlap 2460405 CGAGTCGCAGAACAA CTCCG-GATTCCGGGTTCGCTCGC TGGC GCGAGCGC-CCCGGAATGACGGAG CTGGGACAAGGTCTC TERM 1816 2460484 - 2460515 + F 79 -15.2 -2.91912 | gap 1, overlap 2460510 TCTCTCCACGAGTCA TTCCGGG-GCACGCC GAA GGCGTGAACCCGGAA TCTCTGCATCGATCC RPA2187 2460577 - 2461812 + | hypothetical protein RPA2188 2462145 - 2461819 - | hypothetical protein RPA2189 2462798 - 2462142 - | TetR family transcriptional regulator RPA2190 2464719 - 2462902 - | ABC transporter ATPase RPA2191 2465206 - 2464730 - | hypothetical protein RPA2192 2465309 - 2466109 + | hypothetical protein TERM 1817 2466618 - 2466591 - g 74 -5.6 -4.51174 | gap 1, overlap 2466592 GTACGAGAATGAAAA CGTCGACATGATC GTC GATC-TGCCGACC TCGGCCACCGCGCTC RPA2193 2466304 - 2467518 + | putative ABC transporter, perplasmic binding protein, branched chain amino acids TERM 1818 2467594 - 2467561 - T 70 -11.7 -3.21924 | gap 1, opp_overlap 2467561 2467565, overlap 2467559 GTACTCCGCACAACA GACGTCGTCGCCGGGC TCG ACCCGGCGACC-CATC TTCTTCGTAGAATGA RPA2194 2470255 - 2467751 - | carbon-monoxide dehydrogenase large subunit TERM 1819 2469195 - 2469149 - G 100 -11.5 -4.59773 | gap 2, opp_overlap 2469162 GCGGATCGCCAAAAA GCGGCCGCCGGCATCCAGCGCCA GTT CGGCGC-GGAT-CTGCTGGCCGC GGCCCTGGCTGTCAG TERM 1820 2470183 - 2470169 - G 83 -8.5 -4.62069 | opp_overlap 2470168 2470169 GCGGGACGGGAAAAA GCCGC GTGGG GCGGC GTTTCTGCGCGGGGG RPA2195 2470320 - 2471435 + | Ppx/GppA phosphatase RPA2196 2472175 - 2471462 - | hypothetical protein TERM 1821 2472164 - 2472178 + g 70 -3.5 -4.56775 | GACGGCCGGCCGACG CCGGT TCCGC ACTGG TTTTTCCGGGCCCGT RPA2197 2472235 - 2472948 + | ribosomal RNA methyltransferase RrmJ/FtsJ RPA2198 2474886 - 2473309 - | multidrug efflux protein RPA2199 2474976 - 2475224 + | hypothetical protein TERM 1822 2475406 - 2475430 + F 90 -13.5 -3.97444 | GAATGCCTGGGGAGC GGGGCGGGGCT GTC GGCCTTGCCCC TTTGATTCGTCATAT TERM 1823 2476097 - 2476078 - g 70 -6.4 -4.28994 | gap 1 GATGACGCACGAAAA CCTCGTCAC CGT GCG-CGAGG GCGTCAGCCAGGGCG guaB 2475578 - 2477074 + | inositol-5-monophosphate dehydrogenase TERM 1824 2477065 - 2477049 - f 70 -10.1 -3.56092 | CCATCACCCGCGAAA GCCCGAA CTA TCCGGGC GGGGTGTGAGGCGTC RPA2201 2477373 - 2478398 + | quinone oxidoreductase TERM 1825 2478399 - 2478456 + F 83 -15 -3.40403 | gap 3, overlap 2478408 CCCGAGCGTGCCTGA TCGCAAGCGCCGCA--GCGGAGCCCCGGC GTC GCCGGGACTCTGCGTTGCGGTGGTT-CGA TTGTCATCAGCCGGG TERM 1826 2478408 - 2478448 + F 81 -16.2 -2.80779 | gap 2, overlap 2478399 GCCTGATCGCAAGCG CCGCA--GCGGAGCCCCGGC GTC GCCGGGACTCTGCGTTGCGG TGGTTCGATTGTCAT TERM 1827 2479833 - 2479857 + G 75 -3.4 -4.72986 | gap 1, overlap 2479844 AGGCTTGCTGATGAC CCCG-CGCCGC ACCG GCACCGACGGG TTTTTCGTCAGCGTG RPA2202 2478589 - 2479890 + | SUN-family protein, putative RNA methyltransferase TERM 1828 2479884 - 2479909 + F 81 -2.4 -5.10933 | overlap 2479886 CGTGCTGAAGCGCCA GGGCTGAACC GGGCAG GGTACGGCGC TTTTGTTTTGAGTAC guaA 2480182 - 2481804 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1829 2481972 - 2482003 + F 83 -5.1 -5.02074 | GGCCCAATCCAGCGA TACCGTCAGAGGT ATTGAA GCCAGTGACGGTA TTTTTTCCGCACTAA TERM 1830 2482155 - 2482141 - g 77 -10 -3.96291 | opp_overlap 2482147 GAGAAAGCCTACAAA GTCACG GAC CGTGAC GGCCTTTATGTCCAG RPA2204 2482087 - 2483343 + | integrase RPA2205 2483662 - 2483315 - | hypothetical protein TERM 1831 2483564 - 2483576 + g 86 -9.1 -4.57569 | overlap 2483539 CCGAAGCTCATGGCG GCGGA TCA TCCGC TTTTTGAGGGCCTCA RPA2206 2484126 - 2483746 - | hypothetical protein TERM 1832 2485705 - 2485725 + G 71 -3.2 -4.70659 | overlap 2485694 CTGCTCGATGCCTAC CGCTTCGA TACCT TGGAGGCG TTTTTCGATCTGACG RPA2207 2484202 - 2485770 + | putative recombinase TERM 1833 2486516 - 2486498 - g 72 -13.1 -3.19389 | opp_overlap 2486509 2486515 GAAGCTACTGATCAA GCGCGCC TCTTT GGCGCGC AGCCGGTTGCTGTTC parB2 2485767 - 2486651 + | ParB-like partioning protein RPA2209 2486653 - 2487543 + | ParB-like nuclease TERM 1834 2487707 - 2487744 + F 91 -19.2 -3.07013 | CGCGGCATGATTGTT CTGGAGCGCGCCGATC ATTCCG GGTCGGCGCGCTCCAA TCTCTTCAAGCGCTG TERM 1835 2487763 - 2487789 + F 100 -18.2 -3.61398 | opp_overlap 2487766 CTTCAAGCGCTGGAA TTATCGCGCATC TGA GATGCGCGATAA TTCTTGCACGCAAAG TERM 1836 2487786 - 2487766 - f 78 -15.5 -2.71681 | opp_overlap 2487763 CAAGCGCTGGAATTA TCGCGCATC TGA GATGCGCGA TAATTCTTGCACGCA TERM 1837 2487905 - 2487888 - g 80 -14.1 -3.62418 | opp_overlap 2487880 2487897 ACAATTGACGCCAAA CGCGCGC ATCA GCGCGCG CAAGCCGGTGAGTTG RPA2210 2487834 - 2489702 + | hypothetical protein RPA2211 2492842 - 2489714 - | DEAD/DEAH box helicase:helicase, C-terminal TERM 1838 2490933 - 2490991 + g 95 -19 -3.58269 | gap 3, overlap 2490933 2490977 TCGCGGCCATCTGCG G-TGTCGCCTGACCGCTCG-GCGAGCGCG GCGA CGCTCTCGCGCAAGCGGTC-GGCGACGGC TTTACGCATGCCTTC TERM 1839 2490933 - 2490990 + g 93 -19.2 -2.7464 | overlap 2490933 2490977 TCGCGGCCATCTGCG GTGTCGCCTGACCGCTCG-GCGAGCGCG GCGA CGCTCTCGCGCAAGCGGTC-GGCGACGG CTTTACGCATGCCTT RPA2212 2494688 - 2492832 - | hypothetical protein RPA2213 2495862 - 2494678 - | hypothetical protein TERM 1840 2495754 - 2495727 - G 75 -9.2 -4.07568 | gap 1, opp_overlap 2495733, overlap 2495728 TGGTGCCCGGGAAAA GGTGATCCGCGAT CGA ATCGCGGATG-CC GCCCAGACCCAGTTC RPA2214 2499256 - 2495915 - | helicase TERM 1841 2496911 - 2496921 + g 72 -8.2 -4.07687 | overlap 2496910 GTTGATCTGGCAAGG GCGC ATC GCGC TTTTGAAGACCCCAT TERM 1842 2497265 - 2497291 + g 72 -11.4 -3.53224 | overlap 2497255 2497254 TTCTTCGCCTTCGAC GCGGCGGGCGGT TTC GCCGCACACCGC TTTGGCGAGACGGTC RPA2215 2502677 - 2499276 - | ATP-dependent exodeoxyribonuclease (subunit A) TERM 1843 2502058 - 2502034 - G 85 -9.9 -4.25283 | ACGGCGTGATGAAAA GCGGCCAGG TGCGGGG CCAGGCCGC TGACCGGCGGCGCGG RPA2216 2505340 - 2502677 - | hypothetical protein TERM 1844 2505445 - 2505458 + H 91 -9.5 -4.39877 | overlap 2505439 CGCAGCACCTGCGAT GCCGC ACTC GCGGC TTTCTTGCTTGTTAC TERM 1845 2506478 - 2506497 + G 70 -6.4 -4.16943 | overlap 2506472 2506479 CAGGCCGAGACCGAG GCGGCTTT GGAG AAAGCCGA TTTTGCGGTGTGAGC RPA2217 2505626 - 2506510 + | hypothetical protein TERM 1846 2507212 - 2507197 - g 70 -6 -4.26076 | GGAGTTGCAGGAAAA GCTGGC GAGC GCCCGC GAGTGGGACCTTATC RPA2218 2506544 - 2510062 + | ATP-dependent RNA helicase TERM 1847 2510735 - 2510748 + G 74 -2.3 -4.81083 | overlap 2510736 2510742 TGGCGCTCGATGCGA AGGCT GACG AGCCA TTTTTGCTCGTTCGC RPA2219 2510059 - 2514300 + | ATPase RPA2220 2514284 - 2517118 + | hypothetical protein TERM 1848 2520192 - 2520212 + G 70 -3.8 -4.57073 | CCGGATGCCCCGGCA CCGGAGCG TAAGC CGACCCGG TTTTTCGGGACCGTC RPA2221 2517132 - 2520431 + | hypothetical protein RPA2222 2520519 - 2521466 + | LysR family transcriptional regulator RPA2223 2521681 - 2521433 - | hypothetical protein trbI1 2522930 - 2521686 - | type IV secretion system subunit TrbI TERM 1849 2522529 - 2522586 + g 73 -10.6 -3.63515 | gap 3 AACGCGCTGGGCTTC CGG-ATCCGGCGCGGTCGCGGGTGCCGGG GCG CCCGGGA-TAG-GACCGGGCTGGATGCCG TTGTTGAGCATGGGG trbG1 2523928 - 2522927 - | conjugal transfer protein trbG trbF1 2524614 - 2523928 - | putative conjugal transfer protein trbF TERM 1850 2524185 - 2524171 - G 72 -11.4 -3.54424 | GCCGACCTTGGCAAA CGGGTC GTT GACCCG GGCATAGTCGTTAAG TERM 1851 2524569 - 2524599 + g 89 -16.8 -3.5393 | AAGGGGTCTCGGGTT CGGGCGTCCGGCCG TAA CGGCTGGACGGTCG TTTGAAGAACATCAT trbL 2525909 - 2524611 - | putative conjugal transfer protein trbL trbK 2526256 - 2525909 - | hypothetical protein trbJ 2527008 - 2526265 - | putative conjugal transfer protein trbJ TERM 1852 2526374 - 2526326 - G 72 -5.8 -4.42386 | overlap 2526328 CCCGGAGTCAGAAAA CGGCGAAGCTGCTC-GCGACCTTG GTC CGCAGCCGCCGCGC-GCTGCGCCG CTTCAAGGTTTTGCG TERM 1853 2526478 - 2526532 + g 70 -10.7 -3.56937 | overlap 2526519 GGCTTGGGTCGCCTG CAGCGCGCCGGTGGCGG-ACTGGCTGG AGC CCA-CTAATGCCGCCATCTGCGTGCGG TTGGTTTCGATATTG trbE1 2529452 - 2527005 - | conjugal transfer protein trbE trbD 2529721 - 2529449 - | conjugal transfer protein trbD TERM 1854 2529604 - 2529577 - G 70 -9.8 -3.6682 | opp_overlap 2529602 GGCCAGCCAGCCAAA GCCGCAACCCCA GCCC CAGAGCTGCGGC GAGCGTGCCATTGAT trbC1 2530038 - 2529721 - | putative conjugal transfer protein; TrbC trbB1 2531018 - 2530035 - | conjugal transfer protein trbB TERM 1855 2531072 - 2531022 - R 70 -11.9 -3.14463 | gap 2, overlap 2531064 AACTGTGGTCACGAA CGTCGTCCCGTTTTCGCGTCTCGCC GGA GGCGAGACA-GTCAACGGGTCGA-G CAAGAACCGGCGATA RPA2234 2531598 - 2531155 - | hypothetical protein traG2 2533598 - 2531595 - | plasmid transfer factor, traG protein RPA2236 2535463 - 2533709 - | hypothetical protein TERM 1856 2535216 - 2535228 + g 72 -6.9 -4.25104 | TGACTGCCACGGTGA CGTGC GAC GCGCG TTTTGATGAGCACCC RPA2237 2536574 - 2535732 - | lytic transglycosylase RPA2238 2537562 - 2537089 - | hypothetical protein TERM 1857 2537171 - 2537115 - G 81 -15 -3.53224 | gap 1, opp_overlap 2537114 2537115 2537120 2537156 TACTCCGCCGTGAAA GCCAGGCCGCGTGCCGTCGAACCGTGT AGGG ACGCGGCTCTTCGGCA-GCGGCAAGGC GGTTGTGGATATGTC TERM 1858 2537487 - 2537443 - G 77 -7.8 -4.4078 | overlap 2537421 2537467 GGGCCTGAACCAAAA GGCC-CGACGCCGACGATCGAG AAT CTCT-TCGTCCGCGACATGGCC GAAGCGGATCCAGCG RPA2239 2538439 - 2537801 - | putative partition protein TERM 1859 2538510 - 2538496 - R 71 -8.6 -3.86822 | opp_overlap 2538496 CAACTGCGTTAGAAA GAATCC GAA GGATTC TAGGTTAGAGATGTT RPA2240 2539544 - 2538642 - | replication protein A TERM 1860 2539943 - 2539896 - R 71 -5.7 -4.3534 | gap 3, opp_overlap 2539899 2539902 2539902 GGCGAAGTAGGAAAA GGCCGAGGCGGGTCGCAAACGACG CCC CCT-GTTTCCGACCCG--TCAGCC GGACATTTTCGCGGC RPA2241 2540539 - 2539976 - | hypothetical protein RPA2242 2541145 - 2540885 - | hypothetical protein RPA2243 2541339 - 2541584 + | XRE family transcriptional regulator TERM 1861 2541627 - 2541604 - T 74 -11.7 -3.39784 | gap 1, overlap 2541602 GGACCGGTAAGAATA CGCGGCGGGG CGAGT CCCCGCC-CG GGCTGGCCCGGGCGG RPA2244 2541976 - 2541653 - | hypothetical protein RPA2245 2543107 - 2542604 - | hypothetical protein TERM 1862 2542928 - 2542906 - G 79 -4 -4.8543 | overlap 2542908 GAAGGCCGAGAAAAA TAGCGCCAAT TGG ACCGGCGCCG GTATCGGTCGTCGCG TERM 1863 2542926 - 2542908 - G 72 -8.8 -4.04397 | overlap 2542906 AGGCCGAGAAAAATA GCGCCAAT TGG ACCGGCGC CGGTATCGGTCGTCG TERM 1864 2543177 - 2543134 - H 81 -10.1 -4.17657 | opp_overlap 2543138 2543170, overlap 2543126 2543135 GAGTATAGCCCAAAA GTCGGCTGGGCGGGAGCGC GTTTTT GCGCTTCCGCCCAACTGGT GTGGCTCACGACCAG TERM 1865 2543176 - 2543135 - H 75 -13.6 -3.10112 | opp_overlap 2543138 2543170, overlap 2543126 2543134 AGTATAGCCCAAAAG TCGGCTGGGCGGGAGCGC GTTTTT GCGCTTCCGCCCAACTGG TGTGGCTCACGACCA TERM 1866 2543138 - 2543173 + H 87 -19 -2.64616 | opp_overlap 2543126 2543135 2543134, overlap 2543170 ATAGCCCAAAAGTCG GCTGGGCGGGAGCGCG TTTT TGCGCTTCCGCCCAAC TGGTGTGGCTCACGA RPA2246 2543519 - 2543944 + | hypothetical protein TERM 1867 2543954 - 2543979 + T 100 -17.5 -3.54424 | CGCTAGCGTTGGCTG GTCGGCGGCGC TCAC GCGCCGCCGCC TTTCCGGAAATCGAA RPA2247 2545224 - 2543965 - | hypothetical protein TERM 1868 2544586 - 2544598 + g 70 -6.2 -4.20696 | overlap 2544585 CGAGCCGTCCTGCTC GCGC TGTCC GCGC TTTTGGGCTTGCTCG RPA2248 2546292 - 2545228 - | hypothetical protein TERM 1869 2546248 - 2546198 - G 77 -11.1 -3.89346 | opp_overlap 2546238, overlap 2546200 CGTCCATTGGACAAA TAGTGTCGGCAGACCGCCTCG-GCG TTA CGCGCGAGACGGTCGGCCAGCTC-A GCAGCAGGGCCGTGC TERM 1870 2546247 - 2546200 - G 86 -16.2 -3.53733 | gap 1, opp_overlap 2546238, overlap 2546198 TCCATTGGACAAATA GTGTCGGCAGACCGCCTCG-GCG TTA CGCGCGAGACGGTCGGCCAGCTC AGCAGCAGGGCCGTG RPA2249 2550634 - 2546279 - | putative methylase/helicase TERM 1871 2547786 - 2547753 - G 72 -8.7 -4.08216 | gap 1, opp_overlap 2547752 2547772, overlap 2547725 2547756 TCATCGTCCTGAAAA GCAGCGGTCTCCGCCA GGT TGGCGCTGCCCGC-GC GATTTTCCACACACA TERM 1872 2548097 - 2548126 + g 73 -10.7 -3.67775 | overlap 2548098 CAGGACATATTCGCG CGGGGTGATGTCG ACGG CGATATCGCCCCA TTCTTCGGTGGGAAT RPA2250 2551054 - 2550722 - | hypothetical protein TERM 1873 2551006 - 2550987 - G 100 -16.4 -4.77173 | TCCTGACAAAAGAAA GGCCCGCC AGAA GGCGGGCC GAAAGGTGGGTGGAG TERM 1874 2551019 - 2551047 + g 73 -13 -3.23853 | overlap 2551017 2551020 GCCGAAAGGTGGGTG GAGCGGGGCGGC CGGAC GCCGCCCCGCGA TGTTCATTCAGCGGC TERM 1875 2551020 - 2551046 + g 77 -16.5 -2.54098 | overlap 2551019 2551017 CCGAAAGGTGGGTGG AGCGGGGCGGC CGGAC GCCGCCCCGCG ATGTTCATTCAGCGG RPA2251 2553156 - 2551051 - | putative plasmid stabilization protein TERM 1876 2552316 - 2552349 + g 81 -10.9 -4.03234 | gap 1 TGATCCACTTCCAGC CTT-CGGCGGCGACGG TCT CCGCAGCCGCCGCGAG TTTGTCTGAGACCAG TERM 1877 2552846 - 2552893 + g 86 -7.6 -4.86731 | gap 1, overlap 2552845 2552869 TCGGCCGAGATGTCC GCG-CTCTCGCGGATGACACAGG GCA CGGGTGCTGTCCGCGACAGGCGC TTTTGTTTCACGAGC RPA2252 2554220 - 2553276 - | putative ardC antirestriction protein RPA2253 2554308 - 2555078 + | hypothetical protein RPA2254 2556099 - 2555371 - | hypothetical protein RPA2255 2556767 - 2556144 - | hypothetical protein RPA2256 2557368 - 2557700 + | ArsR family transcriptional regulator ArsR1 arsC1 2557712 - 2558140 + | arsenate reductase pump modifier arsB 2558140 - 2559423 + | arsenical pump membrane protein arsH 2559423 - 2560178 + | arsenical resistance protein ArsH RPA2260 2560618 - 2564379 + | viral RNA helicase RPA2261 2564583 - 2564822 + | GMP synthetase: N-terminal fragment gltS 2566642 - 2565446 - | putative glutamate permease TERM 1878 2566120 - 2566103 - G 73 -14.1 -3.21218 | ACGCTTCATCAGGAA GGCGGCC ACGG GGCCGCC GATCATGCAGGCCGC RPA2263 2567248 - 2566820 - | plasmid stabilization protein RPA2264 2567742 - 2567248 - | hypothetical protein TERM 1879 2567325 - 2567344 + g 71 -3.4 -4.57569 | overlap 2567322 2567329 GCGGCGAGCGCCGGA GCGCGGCA AGGA TGCCTCCC TTTTTCGGCGGCTCG RPA2265 2568734 - 2567739 - | hypothetical protein TERM 1880 2568759 - 2568731 - G 84 -16.9 -3.08464 | GCATGATGGATTGAA CCATACCTGACAC AGG ATGTCAGGTATGG GCTGCTAGGACGGTG gst1 2568791 - 2569447 + | putative glutathione S-transferase TERM 1881 2569582 - 2569557 - f 71 -13.9 -2.68434 | opp_overlap 2569576 2569577, overlap 2569552 2569554 GCCGACATCAGACGA CGCGGCGCCGC CGAT GTGGCGCCGCA ATGCGCTGCGGCTGT TERM 1882 2569618 - 2569607 - f 70 -7.2 -4.07568 | opp_overlap 2569607 2569609 2569614 GGCTGTTTGCGAAAA CGGC CGTC GCCG GGATGGCACGTGCGT RPA2267 2569676 - 2570119 + | hypothetical protein RPA2268 2570195 - 2570755 + | flavin reductase-like TERM 1883 2570753 - 2570785 + T 71 -9 -3.74693 | opp_overlap 2570769 2570770 CGGCCGGGGATGCTG TGAGCGGACGCCGA AACGA TCGGCGCCCGCAGA TTTGATCGCGTGCCC RPA2269 2572605 - 2570803 - | hypothetical protein TERM 1884 2571312 - 2571324 + g 71 -9.1 -3.87815 | opp_overlap 2571273 2571307 2571308 CGAGCATGAAGCCGG CGGCT TCC AGCCG TTTGTAGAAATCGGC TERM 1885 2572005 - 2572015 + g 82 -4.6 -4.88736 | TGCGCCAGCTATCGC CGGG CCG CTCG TTTTTCTCGATGATA RPA2270 2573764 - 2572793 - | hypothetical protein RPA2271 2575062 - 2573878 - | pyruvate kinase RPA2272 2575540 - 2575887 + | hypothetical protein RPA2273 2576083 - 2576379 + | hypothetical protein RPA2274 2576370 - 2576729 + | hypothetical protein TERM 1886 2576851 - 2576816 - f 74 -9.7 -3.86015 | gap 3, overlap 2576818 TAGTCGGGCGAGAAA GACGG-GC-CGG-GCGCC AAA GGCGCTCCGAGCACCGGC TCCAAAAAAGAAGAC TERM 1887 2576849 - 2576818 - f 71 -10.9 -3.51934 | gap 3, overlap 2576816 GTCGGGCGAGAAAGA CGG-GC-CGG-GCGCC AAA GGCGCTCCGAGCACCG GCTCCAAAAAAGAAG TERM 1888 2576879 - 2576861 - f 81 -3.8 -5.00884 | overlap 2576864 2576866 2576869 ACCGGCTCCAAAAAA GAAGACAT CGG ACGTCTGC GCCGGCACCGCCTGC TERM 1889 2576876 - 2576864 - f 72 -4.1 -4.61482 | overlap 2576861 2576866 2576869 GGCTCCAAAAAAGAA GACAT CGG ACGTC TGCGCCGGCACCGCC RPA2275 2576915 - 2577670 + | branched chain amino acid ABC transporter ATP-binding protein RPA2276 2577663 - 2578409 + | branched chain amino acid ABC transporter ATP-binding protein RPA2277 2578448 - 2579323 + | inner-membrane translocator TERM 1890 2579593 - 2579636 + G 91 -17.4 -3.64103 | gap 1, overlap 2579594 CGCTGAAGGTGTGGG GGCTGCCGCCGGAACTGGCGA TCA TCGCCGGTACCG-CGGCGGCG TTTGCGCTGTCGGTG TERM 1891 2579594 - 2579635 + G 100 -20.9 -2.7814 | gap 1, overlap 2579593 GCTGAAGGTGTGGGG GCTGCCGCCGGAACTGGCGA TCA TCGCCGGTACCG-CGGCGGC GTTTGCGCTGTCGGT RPA2278 2579325 - 2580296 + | inner-membrane translocator TERM 1892 2580343 - 2580321 - T 79 -16.2 -2.52676 | GAGGGGCTGAAGGGA GGCCGCGCCG CCA CGGCGCTGCC TCCACCCGCACAGAC TERM 1893 2580420 - 2580381 - T 100 -17.2 -4.37092 | gap 1, opp_overlap 2580387, overlap 2580384 2580387 AGCGTTGTCAGAAAA CA-AGAACCGCCGCGTGGC TGA GCCGCGCGGCGGTTTTCTG TTTTGGTTGGTTCTG TERM 1894 2580416 - 2580384 - T 100 -19.1 -4.30995 | opp_overlap 2580387, overlap 2580381 2580387 GTTGTCAGAAAACAA GAACCGCCGCGTGGC TGA GCCGCGCGGCGGTTT TCTGTTTTGGTTGGT TERM 1895 2580413 - 2580387 - T 100 -20.8 -4.26938 | opp_overlap 2580387, overlap 2580384 2580381 GTCAGAAAACAAGAA CCGCCGCGTGGC TGA GCCGCGCGGCGG TTTTCTGTTTTGGTT TERM 1896 2580387 - 2580413 + T 100 -23 -4.93333 | opp_overlap 2580384 2580381 2580387 GTCAGAAAACAAGAA CCGCCGCGTGGC TGA GCCGCGCGGCGG TTTTCTGTTTTGGTT RPA2279 2583054 - 2580448 - | hypothetical protein TERM 1897 2581103 - 2581124 + g 72 -12.9 -3.21099 | CGCAGGCTGCGTTCG GCGACGGGC TCCA GCCCGGCGC TTCGTGCTGGCCCGC TERM 1898 2583043 - 2583063 + g 70 -8.2 -3.9941 | CATGGCCGCCCAGTT CTGCGGTG ACATG CGCCGCGG TTTGGTTGTGACAGG RPA2280 2583631 - 2584275 + | hypothetical protein RPA2281 2584290 - 2585306 + | phosphate transporter RPA2282 2585635 - 2585324 - | hypothetical protein RPA2283 2585953 - 2585678 - | putative proteic killer suppression protein {plasmid Rts1) RPA2284 2586356 - 2586042 - | drug efflux protein prfC 2586587 - 2588212 + | peptide chain release factor 3 RPA2286 2590193 - 2589207 - | hypothetical protein TERM 1899 2589558 - 2589545 - G 78 -5.9 -4.66953 | CGAACAGCGTAAAAA GGCCC CTAT GAGCC TCCGTATTGAACATC RPA2287 2590350 - 2591336 + | hypothetical protein RPA2288 2591903 - 2591445 - | cyclase/dehydrase RPA2289 2592184 - 2593512 + | hypothetical protein TERM 1900 2593927 - 2593897 - g 76 -14.6 -3.1978 | overlap 2593895 ACGCCGAGATCAAGA CCGCCTCGGCCACC GTC GGTATCCGCGGCGG CGTCGCGATGATCGG RPA2290 2593524 - 2595245 + | hypothetical protein TERM 1901 2595319 - 2595337 + F 75 -11.6 -3.61764 | overlap 2595320 CACTTGCCAGACCTT CCGGCCGC GAT GCGGCCGC TTTCGCGCTTGATCC TERM 1902 2595320 - 2595336 + F 78 -15.1 -2.76737 | overlap 2595319 ACTTGCCAGACCTTC CGGCCGC GAT GCGGCCG CTTTCGCGCTTGATC RPA2291 2595381 - 2597675 + | putative adenylate/guanylate cyclase RPA2292 2599114 - 2597690 - | multi-sensor signal transduction histidine kinase TERM 1903 2598931 - 2598899 - G 70 -8.3 -3.96327 | opp_overlap 2598929 ACCTGTCAGCAGAAA GCCGCGCTCGCTG GTCTCGG CTTCGAGCACGGC CTGCTGGATCGCGGA RPA2293 2599898 - 2599302 - | hypothetical protein RPA2294 2600118 - 2600813 + | TetR family transcriptional regulator TERM 1904 2601180 - 2601231 + F 81 -7.9 -4.4078 | overlap 2601183 2601186 CCGCCACCGTCGAGG GGCCACGCGCGACCGATCACCTG CCGCCC CATGTGATCGGTCGCGCTTCTTG TTTTCGTTGCGGCGG TERM 1905 2601183 - 2601228 + F 100 -16.2 -4.32402 | overlap 2601180 2601186 CCACCGTCGAGGGGC CACGCGCGACCGATCACCTG CCGCCC CATGTGATCGGTCGCGCTTC TTGTTTTCGTTGCGG TERM 1906 2601186 - 2601225 + F 100 -22.3 -4.26559 | overlap 2601183 2601180 CCGTCGAGGGGCCAC GCGCGACCGATCACCTG CCGCCC CATGTGATCGGTCGCGC TTCTTGTTTTCGTTG RPA2295 2601286 - 2601942 + | hypothetical protein RPA2296 2601939 - 2602415 + | hypothetical protein TERM 1907 2602658 - 2602692 + F 70 -10 -3.60792 | AGCTTACCGCCTGCA CGTCCGAATGGGCG AGGGCGA CGTCCATCTGGACG TTTGGCGGTTCAACG TERM 1908 2603565 - 2603521 - g 79 -16.6 -2.93991 | gap 1, overlap 2603516 2603558 2603560 CCGAAGGCAACTACA CGATCGGCCTCGATCAGGACC TGAC GGCCCTGACCAAGACC-ATCG ATGCGATGAACAACA RPA2297 2602665 - 2605472 + | flagellin TERM 1909 2605516 - 2605479 - f 93 -16.9 -3.50853 | opp_overlap 2605480 2605483, overlap 2605480 CTGCGCTAACGACAA CGAACGGGCCGGCGGCG GAAA CGTCGCCGGCCTGTTCT TCTTCTAAATCCAGG TERM 1910 2605515 - 2605480 - f 91 -20.4 -2.70298 | opp_overlap 2605480 2605483, overlap 2605479 TGCGCTAACGACAAC GAACGGGCCGGCGGCG GAAA CGTCGCCGGCCTGTTC TTCTTCTAAATCCAG TERM 1911 2605480 - 2605515 + F 100 -24.8 -3.8211 | opp_overlap 2605480 2605479, overlap 2605483 TGCGCTAACGACAAC GAACGGGCCGGCGGCG GAAA CGTCGCCGGCCTGTTC TTCTTCTAAATCCAG TERM 1912 2605483 - 2605512 + F 100 -20.7 -4.03888 | opp_overlap 2605480 2605479, overlap 2605480 GCTAACGACAACGAA CGGGCCGGCGGCG GAAA CGTCGCCGGCCTG TTCTTCTTCTAAATC RPA2298 2605541 - 2606095 + | hypothetical protein RPA2299 2606224 - 2606970 + | two-component LuxR family transcriptional regulator RPA2300 2607195 - 2607848 + | LuxR family regulatory protein RPA2301 2608865 - 2607873 - | AraC family transcriptional regulator TERM 1913 2607963 - 2607993 + g 100 -11.9 -4.48987 | gap 2, overlap 2607967 GCTGGGTTCGGCGAA GCCGAGGTCGGCGGC GAT GTCGCCGACC--GGC TTTTCGTTCTCGGCG TERM 1914 2608478 - 2608492 + g 74 -5.6 -4.46212 | TGCGATAGGCGAAGG CTGAGC GCG GCGCAG TTTTGTCGTGGAGCA RPA2302 2609019 - 2610710 + | acyl-CoA synthetase TERM 1915 2610843 - 2610890 + G 83 -14.1 -3.85698 | opp_overlap 2610825 2610869 2610872 GGCCTCGATCTCAAC GCCGAGGCTGGCGCCAAGCTC GAACAG GAGCTCGGTGCGAGCTTCCGC TTTCTCGCCACCGAC RPA2303 2610729 - 2611496 + | putative 3-hydroxyacyl-CoA dehydrogenase TERM 1916 2611485 - 2611506 + F 89 -12.9 -4.24534 | overlap 2611486 GGTGCACTGCGGATG GCGCCGCGC TGAG GCGCGGCGG TTTCTCTATTCATTC TERM 1917 2611486 - 2611505 + F 86 -16.4 -3.13636 | overlap 2611485 GTGCACTGCGGATGG CGCCGCGC TGAG GCGCGGCG GTTTCTCTATTCATT RPA2304 2611555 - 2612742 + | putative acyl-CoA thiolase TERM 1918 2612861 - 2612890 + G 71 -9.2 -3.88291 | opp_overlap 2612871 CACGCCTTTCCGCGC GCCGAACTGACC GAAATG GGCCAGCTCGGC TTTCTCGGCATGCTG RPA2305 2612750 - 2613877 + | acyl-CoA dehydrogenase TERM 1919 2614219 - 2614182 - f 100 -21.7 -3.53012 | opp_overlap 2614187, overlap 2614187 CGGGCCCGCGCTAAA CACAATATCAATACCGT ACGT ACGGTATTGATATTGTG TAACGGATTGAGGGC TERM 1920 2614187 - 2614214 + F 83 -14.4 -3.494 | opp_overlap 2614187 2614182 CCGCGCTAAACACAA TATCAATACCGT ACGT ACGGTATTGATA TTGTGTAACGGATTG TERM 1921 2614214 - 2614187 - f 88 -14.4 -3.81488 | opp_overlap 2614187, overlap 2614182 CCGCGCTAAACACAA TATCAATACCGT ACGT ACGGTATTGATA TTGTGTAACGGATTG RPA2306 2614239 - 2614787 + | nickel-dependent hydrogenase b-type cytochrome subunit RPA2307 2617183 - 2614856 - | tonB-dependent receptor precursor TERM 1922 2616938 - 2616986 + g 81 -16.6 -3.09933 | TGGCGCTTGCGCCGC GGCGCGGCGTGCACCGCGGCCG TCGCT CGACCGTGCTGCACGTTGCGGC TTCGGTGGATTCGCC TERM 1923 2617404 - 2617422 + H 73 -3.1 -4.69549 | opp_overlap 2617398, overlap 2617398 2617406 TCTCGAAGAGGAGGT TACGTCC TTCGT GGATGTG TTTTGGTTTTGCGTT RPA2308 2617418 - 2618596 + | periplasmic iron siderophore binding protein of ABC transporter TERM 1924 2618630 - 2618662 + G 70 -6.1 -4.25256 | TGGTTCGATCCGGGC GCCCCGCCACATCGA CTG TCGTTGTCGCTGCGC TTGTTTTCCTGCCGA RPA2309 2618593 - 2619684 + | putative iron chelatin ABC transporter, permease subunit RPA2310 2619681 - 2620451 + | putative iron ABC transporter ATP-binding protein RPA2311 2621075 - 2620446 - | hypothetical protein RPA2312 2621737 - 2621072 - | hypothetical protein RPA2313 2622218 - 2621691 - | hypothetical protein RPA2314 2622816 - 2623256 + | cytochrome c556 RPA2315 2623260 - 2623934 + | putative nickel-dependent hydrogenase, b-type cytochrome subunit TERM 1925 2623940 - 2623961 + T 79 -11.5 -3.85698 | overlap 2623941 GCTGCTTTAATGCGC GCGCGGAGC CTCC GCTCCGCGA TTTCTCACCGCCCGC TERM 1926 2623941 - 2623960 + T 77 -15 -2.91276 | overlap 2623940 CTGCTTTAATGCGCG CGCGGAGC CTCC GCTCCGCG ATTTCTCACCGCCCG RPA2316 2624751 - 2623966 - | enoyl-CoA hydratase TERM 1927 2623995 - 2624026 + g 100 -21.8 -3.04144 | opp_overlap 2623983 2624005, overlap 2624005 ACACCGGCTGGCGCT TGCCAAGGAAGGCA TCGA TGCCTTCCTTGGCA TCTTCGGCCTGAAGG gctB 2625570 - 2624776 - | putative CoA transferase, small subunit B TERM 1928 2625171 - 2625122 - G 74 -10.5 -3.80841 | gap 1, opp_overlap 2625128 2625151 ACCATGATGATGAAA CGCTTG-GCGCCGCAGGCGATGTC ATT GGCACCGCCGGCGCCGGGCAGGCG GATCTTGGGCGGCCG gctA 2626562 - 2625567 - | glutaconate CoA-transferase, subunit A RPA2319 2627682 - 2626690 - | hypothetical protein TERM 1929 2627403 - 2627461 + g 71 -9.3 -3.78934 | gap 2, overlap 2627404 2627445 CCAGCGACAGCGTGT AGCCGTCG--GGCGCCGCCTTGGCGGCCG CGT CGGCCGCGATCGCGGTGCCGGCTCCGGCC TTGTTCTCGACCACC RPA2320 2629262 - 2627760 - | TctA subunit of the tripartite tricarboxylate transport(TTT) family RPA2321 2629738 - 2629262 - | TctB subunit of the tripartite tricarboxylate transporter(TTT) family TERM 1930 2630573 - 2630593 + G 73 -9.7 -3.89614 | ACCGTCGTCTCGCGC CATCTGCAG AAC CTGCAGAAG TTTCTCGGCGTTGCG RPA2322 2630453 - 2631346 + | LysR family transcriptional regulator TERM 1931 2631350 - 2631393 + F 74 -9.1 -3.87346 | gap 3, overlap 2631353 2631354 GAACTCGAGTGATGG CGTGTGGCTGCA-TGTTGAGCG GAT CGCTCAACAATGC-GCCA-GTG TTTGCTCGTTATGGT TERM 1932 2631353 - 2631391 + F 74 -11.9 -3.51793 | overlap 2631350 2631354 CTCGAGTGATGGCGT GTGGCTGCA-TGTTGAGCG GAT CGCTCAACAATGC-GCCAG TGTTTGCTCGTTATG TERM 1933 2631354 - 2631390 + F 78 -15.4 -2.70353 | overlap 2631353 2631350 TCGAGTGATGGCGTG TGGCTGCA-TGTTGAGCG GAT CGCTCAACAATGC-GCCA GTGTTTGCTCGTTAT goaT 2631514 - 2632788 + | 4-aminobutyrate aminotransferase TERM 1934 2633465 - 2633445 - g 72 -14.7 -2.73875 | overlap 2633442 GCGTGCTCAACATCA TCACCGGCG ATG CGCCGGCGA TCGGCAAGGCGTGGA gabD2 2632826 - 2634277 + | succinate-semialdehyde dehydrogenase RPA2325 2634327 - 2635625 + | acetylornithine deacetylase RPA2326 2635625 - 2637214 + | hypothetical protein RPA2327 2637293 - 2638882 + | putative ABC transporter oligopeptide-binding protein RPA2328 2638879 - 2639901 + | putative ABC transporter permease protein RPA2329 2639914 - 2640753 + | putative ABC transporter permease protein RPA2330 2640750 - 2642408 + | putative ABC transporter ATP-binding protein TERM 1935 2643087 - 2643097 + G 72 -8.2 -4.07568 | overlap 2643054 AGATCGCACGCGAGG GCCG CGC CGGC TTTTACGAAGGCGAA ggt2 2642483 - 2644060 + | gamma-glutamyltranspeptidase TERM 1936 2644121 - 2644080 - f 84 -10.8 -4.14392 | opp_overlap 2644094, overlap 2644063 GTCGAACGCGGAAAA CACGGTCGATCGAGCCGG ACAGCG CCGGTTTGATCGACTGCG CCGAAGGATTGCGAT RPA2332 2644354 - 2645508 + | nuclease TERM 1937 2645696 - 2645723 + T 71 -5.4 -4.49556 | overlap 2645697 ATCGATTGTGACGGA TGGCGCGGGTGG GGTG CTGCCTGAGCCG TTTCTTTGATGCGAA ctpC 2647840 - 2645744 - | putative cation transport ATPase, copper transporter RPA2334 2648175 - 2647837 - | hypothetical protein RPA2335 2648509 - 2648168 - | hypothetical protein RPA2336 2648819 - 2648496 - | hypothetical protein RPA2337 2649169 - 2648837 - | hypothetical protein RPA2338 2649677 - 2649177 - | hypothetical protein TERM 1938 2649383 - 2649409 + g 72 -13.6 -3.1994 | CGATTGGGTCGTTGG CGGCCGTCGCAG CCT CTGCGCCGGCGG TTGATGGATCCTGTG TERM 1939 2650152 - 2650166 + H 70 -10 -3.5594 | TGTTCCCTATGGTGG TCCTCG AAA CGAGGA TTTCCAGAGTGAATT RPA2339 2650175 - 2650666 + | FUR family transcriptional regulator RPA2340 2652166 - 2650793 - | hypothetical protein ilvD 2653897 - 2652218 - | putative dihydroxy-acid dehydratase TERM 1940 2652837 - 2652861 + g 78 -6.3 -4.62069 | overlap 2652821 2652825 2652838 TCGTCCGGCGCGGGC GCCTCGGCGAG ATT TTCCCCGAGGG TTTTTCCGGTGACCG TERM 1941 2653039 - 2653080 + g 70 -12.9 -3.01712 | CCACGACGTCCATTT CGATGCGGCTTTCGATGGC GATC GCCGTCAGATGCCGCACCG TGTTGACGGACAGCC TERM 1942 2653956 - 2653926 - R 76 -14 -3.15427 | opp_overlap 2653920 2653929, overlap 2653929 AAGATGCGGGAGCAA TGAGCGTTCCGACA CGG CGCCGGAACGCTCT TCCACTTATCCGAGT TERM 1943 2653953 - 2653929 - R 75 -14.3 -2.78018 | opp_overlap 2653920 2653929, overlap 2653926 ATGCGGGAGCAATGA GCGTTCCGACA CGG CGCCGGAACGC TCTTCCACTTATCCG RPA2342 2655269 - 2653962 - | putative transmembrane transport protein RPA2343 2655678 - 2656355 + | GntR family transcriptional regulator RPA2344 2657014 - 2656394 - | hypothetical protein RPA2345 2658025 - 2657015 - | hypothetical protein TERM 1944 2658092 - 2658076 - R 73 -11.5 -3.61268 | GACCGAATGGGCAAA GCGGCAC CAC GCGCCGC GTCGCTGACAGTCGT RPA2346 2659448 - 2658270 - | hypothetical protein RPA2347 2660881 - 2659490 - | vanadium nitrogenase associated protein N RPA2348 2662416 - 2660881 - | nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) metY 2663834 - 2662641 - | putative homocysteine synthase metC 2664108 - 2665409 + | putative O-acetylhomoserine sulfhydrylase TERM 1945 2665408 - 2665458 + T 72 -12 -3.33696 | gap 3, overlap 2665402 CGCTGGACGCTGCAT GATG-CTGTCGTTCCGAGGGGCTGC CCTG GC-GCCCCTTGGAACG-CGGTCAAC TTGATTGGGAGGCGG RPA2351 2666062 - 2665574 - | AsnC family transcriptional regulator TERM 1946 2666007 - 2666028 + g 73 -6.5 -4.3467 | overlap 2666009 ACCGAGTGGGTAGCG TTCTCCTGC AGCA GCCGGAGGA TTTTGATATCGAGAT TERM 1947 2666289 - 2666260 - R 85 -10.1 -4.30719 | gap 1, opp_overlap 2666260 2666257 TGGGTGGAGAACAAA TCGCTCGCGGAG TGGCGTT CTCCG-GAGCGA TCGTTCTTGCCGGCC RPA2352 2666840 - 2666343 - | hypothetical protein nifH1 2667758 - 2666883 - | putative nitrogenase NifH subunit nifB2 2668727 - 2667804 - | putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB RPA2355 2669107 - 2668724 - | nitrogenase NifB RPA2356 2669577 - 2670974 + | putative cystathionine beta-synthase TERM 1948 2671206 - 2671149 - g 73 -13.3 -3.28712 | gap 1, opp_overlap 2671157 2671162 2671167, overlap 2671122 2671123 2671134 2671132 2671150 CGCGCGCTCGCAGAA CCCGACGCGCGCCGCGTTCGAGGCCG CGATCGC CGACGCCGAGCGCGGC-CACGCCGGC TTCGCTTTCGCCTCC TERM 1949 2671205 - 2671150 - g 80 -16.8 -2.57132 | gap 1, opp_overlap 2671157 2671162 2671167, overlap 2671122 2671123 2671134 2671132 2671149 GCGCGCTCGCAGAAC CCGACGCGCGCCGCGTTCGAGGCCG CGATCGC CGACGCCGAGCGCGGC-CACGCCGG CTTCGCTTTCGCCTC TERM 1950 2671157 - 2671211 + G 70 -11 -3.60098 | opp_overlap 2671122 2671123 2671134 2671132 2671150 2671149, overlap 2671162 2671167 CGCAGAACCCGACGC GCGCCGCGTTCGAGGCCGCGATCGCC GAC GCCGAGCGCGGCCACGCCGGCTTCGC TTTCGCCTCCGGCCT RPA2357 2670976 - 2672148 + | cystathionine gamma-lyase TERM 1951 2672183 - 2672208 + T 100 -14.7 -5.45802 | overlap 2672184 TTTCTGAGCAATCTT CGATGCCCGGC ACGT GCCGGGCATCC TTTTTGTTTTAGAAG TERM 1952 2672184 - 2672207 + T 100 -18.2 -3.86397 | overlap 2672183 TTCTGAGCAATCTTC GATGCCCGGC ACGT GCCGGGCATC CTTTTTGTTTTAGAA RPA2358 2673296 - 2672250 - | 2OG-Fe(II) oxygenase family protein RPA2359 2673702 - 2674571 + | putative periplasmic protein RPA2360 2674580 - 2675713 + | ABC transporter, ATP-binding protein RPA2361 2675667 - 2676368 + | putative ABC transporter, permease protein RPA2362 2676404 - 2677717 + | putative O-acetylhomoserine sulfhydrylase NifD1 2677746 - 2679251 + | nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) RPA2364 2679264 - 2680643 + | nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein RPA2365 2681755 - 2680655 - | putative L-allo-threonine aldolase RPA2366 2682058 - 2682309 + | hypothetical protein RPA2367 2683532 - 2682429 - | two component sensor histidine kinase, AdeS TERM 1953 2682740 - 2682762 + g 75 -9 -4.07568 | GGATCACGATCATGC CGGGCGTTGC GTA GCGGCGCGCG TTTTCCAAAAGCGCG RPA2368 2683762 - 2683529 - | hypothetical protein RPA2369 2684213 - 2683800 - | hypothetical protein RPA2369a 2684467 - 2684210 - | hypothetical protein TERM 1954 2684440 - 2684418 - G 100 -13.4 -4.30576 | CGGCCACGATGAAAA CCGATAGCCG AGG CGGCGATCGG GACGACAGGTGCCCC RPA2370 2684612 - 2684472 - | hypothetical protein mexA 2684924 - 2686141 + | putative RND multidrug efflux membrane fusion protein MexA precursor TERM 1955 2687781 - 2687793 + G 70 -10.5 -3.72324 | CGTGCTCGTCATCGT CGCCG CCG CGGCG TTGTTCATCCGCCTG TERM 1956 2688280 - 2688257 - g 84 -9.5 -4.56597 | GCGCCGTTGGAAAAA GCCGGCTCC TGAGCG GGACCCGGC CCAATGGGCAGGACG mexB 2686138 - 2689305 + | RND multidrug efflux transporter MexB RPA2373 2689314 - 2690843 + | outer membrane protein RPA2374 2690837 - 2691043 + | hypothetical protein RPA2375 2691216 - 2692823 + | hypothetical protein TERM 1957 2693711 - 2693682 - T 70 -7.9 -4.06502 | gap 1, opp_overlap 2693687 CACCCCCAAACGAAA CGAAGCTCTTCACG GAA CGCGAAGCG-TTCG ATGTGGCTGATGACG RPA2377 2693968 - 2693666 - | hypothetical protein TERM 1958 2693999 - 2694034 + r 91 -19 -3.10597 | opp_overlap 2694003, overlap 2693999 TGGCATCTATTGTGA CGAATGGCGCTGGCGG GATA CCGCCTGCGCCATTCC GTTTTGCGTGGACAG TERM 1959 2693999 - 2694035 + r 100 -18.8 -4.18018 | gap 1, opp_overlap 2694003, overlap 2693999 TGGCATCTATTGTGA C-GAATGGCGCTGGCGG GATA CCGCCTGCGCCATTCCG TTTTGCGTGGACAGC TERM 1960 2694030 - 2694003 - R 91 -18.4 -3.15663 | opp_overlap 2693999 2693999 ATCTATTGTGACGAA TGGCGCTGGCGG GATA CCGCCTGCGCCA TTCCGTTTTGCGTGG RPA2378 2696398 - 2694083 - | putative tonB-dependent receptor protein RPA2379 2697043 - 2696546 - | acetyltransferase TERM 1961 2696845 - 2696792 - G 75 -13 -3.36175 | gap 1, overlap 2696793 2696822 2696823 AACGCCGATCCAGAA TTCGGCGGCGTGGGCGCGGCGCCCA AGAAA CGGGCGCAACGCGGACGC-GCCGAC GACGCGTCCATCCAA TERM 1962 2696844 - 2696793 - G 77 -16.5 -2.61383 | gap 1, overlap 2696792 2696822 2696823 ACGCCGATCCAGAAT TCGGCGGCGTGGGCGCGGCGCCCA AGAAA CGGGCGCAACGCGGACGC-GCCGA CGACGCGTCCATCCA RPA2380 2699288 - 2697057 - | tonB dependent iron siderophore receptor fecR4 2700403 - 2699387 - | FecR, iron siderophore sensor protein RPA2382 2701254 - 2700496 - | putative iron(III) ABC transporter, ATP-binding protein RPA2383 2702201 - 2701251 - | putative iron(III) ABC transporter, permease protein RPA2384 2703171 - 2702194 - | putative ironIII transport permease protein TERM 1963 2702769 - 2702749 - G 73 -9.7 -3.97834 | CAACGGCACCAGAAA CGGCTGC GTCGGCG GCAGCCG ATGGGCGATCGCCAG TERM 1964 2703136 - 2703103 - G 72 -13.1 -3.21416 | gap 1, opp_overlap 2703135, overlap 2703114 2703115 GATGCTGACGACGAA CAGGGCGACAAGCGCC AGC AGCGCG-GTCGCCCCG GCGGAGCGCGACGCC RPA2385 2704073 - 2703168 - | putative ABC transporter, periplasmic Fe+3 siderophore binding protein RPA2386 2704981 - 2704064 - | hypothetical protein TERM 1965 2704095 - 2704129 + g 72 -13.5 -3.18264 | overlap 2704128 CCTTTGGAGGAGGCG GCGCGGCCGGCGG CACGCGACT CTGCCAGCCGCGC TTGCTGCGTGCCCGC RPA2387 2706291 - 2704981 - | hypothetical protein TERM 1966 2705525 - 2705492 - G 76 -14.5 -3.19522 | opp_overlap 2705489 2705488 2705487, overlap 2705485 CGATCGAAGATGTAA CCACCGCCGACGCTC GGTT GAGCGACGGCGTTGA GGATCCGTTCTTTCG RPA2388 2707556 - 2706288 - | acyl-CoA synthetase RPA2389 2709241 - 2707553 - | rhizobactin siderophore biosynthesis protein RhsF RPA2390 2711051 - 2709270 - | rhizobactin siderophore biosynthesis protein rhbC RPA2391 2711220 - 2711837 + | RNA polymerase ECF-type sigma factor, FecI TERM 1967 2712968 - 2712933 - f 91 -16.1 -3.61178 | opp_overlap 2712929 2712928 2712924 CGTACCGATCTGAAA CGCCTGTTGGCCCGG TTGCAG CCGGGCCGACAGCCG AAGCGTCTTGTCGCC TERM 1968 2713343 - 2713305 - f 70 -12.2 -3.1637 | opp_overlap 2713332, overlap 2713295 ATAGATCGCCACTAA GGCGCGGCCGGCTGCCCT CGA AGCACTGCCGGCGGCGGC GCACCCGATGGATGT prpC 2713351 - 2714226 + | putative 2-methylcitrate synthase prpB 2714237 - 2715154 + | putative carboxyphosphonoenolpyruvate phosphonomutase RPA2396 2715184 - 2715783 + | hypothetical protein metE 2716133 - 2718499 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RPA2398 2719364 - 2721757 + | iron siderophore uptake receptor family protein TERM 1969 2721784 - 2721814 + G 70 -4 -4.45664 | opp_overlap 2721787, overlap 2721787 2721788 CAGATTGCCCTCAAC CTACGCAGC-GCGC TGATC GCGCTGCTGC-TCG TTTTCGTTCCGTTGG TERM 1970 2723914 - 2723924 + G 75 -3.2 -4.84363 | overlap 2723903 2723918 CAGCCCGACGAGTTG TTCG CGG CGGA TTTTTCGTCGTTTCA cobN 2721766 - 2725668 + | cobaltochelatase RPA2400 2725671 - 2726141 + | hypothetical protein RPA2401 2726141 - 2726476 + | hypothetical protein RPA2402 2726837 - 2727190 + | hypothetical protein TERM 1971 2728049 - 2728026 - g 70 -13.2 -3.05844 | gap 1, opp_overlap 2728026 GGCTGCATCGTAACA GCGTCGATGCC GGT GGC-TCGACGC TGATTCAGGATGCGG RPA2403 2727725 - 2728216 + | iron-chelator utilization protein TERM 1972 2729440 - 2729489 + G 70 -2 -4.59773 | gap 1, overlap 2729428 2729441 ATCCGGCGGCTCCGG TGATGCCTCC-GTTCATGCTGCG CGAGA TGCAGCAGGCGCTGGTGGTGTCG TTTTTGAGCGTGACG RPA2404 2728872 - 2729876 + | AraC family transcriptional regulator TERM 1973 2730241 - 2730269 + G 75 -13.7 -3.21962 | opp_overlap 2730211, overlap 2730233 TCGATGCCGAGCAGC GTGTCCGCGGCCG CGA CGGCCGCCGCCGC TTCCGTTCGTCCTAT draT2 2729949 - 2730821 + | NAD+ ADP-ribosyltransferase draG 2730833 - 2731723 + | ADP-ribosyl-(dinitrogen reductase) hydrolase TERM 1974 2731785 - 2731751 - T 83 -14.3 -3.53563 | opp_overlap 2731758, overlap 2731758 AGAGGTTGTCGCAAA TGGGAAAGGCCCCGC ATACG GCGGAGCCTCTCTCA CGAACACATCGATCT TERM 1975 2731778 - 2731758 - T 78 -11.8 -3.71649 | opp_overlap 2731758, overlap 2731751 GTCGCAAATGGGAAA GGCCCCGC ATACG GCGGAGCC TCTCTCACGAACACA RPA2407 2732553 - 2732218 - | hypothetical protein TERM 1976 2732899 - 2732927 + H 100 -14.6 -5.61881 | gap 1, opp_overlap 2732899 TGGTTGGTGGCGAAA GCGCCC-TCGGCT CGAC AGCCGGTGGGCGC TTTTTGTTTTTGGAC TERM 1977 2732927 - 2732899 - H 74 -12.4 -3.53012 | gap 1, opp_overlap 2732899 TGGTTGGTGGCGAAA GCGCCC-TCGGCT CGAC AGCCGGTGGGCGC TTTTTGTTTTTGGAC amiC1 2732949 - 2734106 + | putative aliphatic amidase expression-regulating protein, AmiC RPA2409 2734103 - 2734768 + | AmiR antitermination protein TERM 1978 2736005 - 2735973 - g 70 -10.5 -3.7282 | overlap 2735993 CGACCTGACGAAGAA GGATCCGATGGCGCA ATA CACGCCGTCGAACCC GCCGCCCAAGTAAGT RPA2410 2734780 - 2736018 + | putative urea/short-chain amide transport system substrate-binding protein TERM 1979 2736042 - 2736019 - f 72 -12.4 -3.33696 | opp_overlap 2736029, overlap 2735993 CCGCCGCCCAAGTAA GTGCGGCGGA CCGC TCCGGCGCAC CCTGACGCGCCGGAG TERM 1980 2736029 - 2736060 + F 95 -20.2 -3.27022 | opp_overlap 2735993 2736019 AGTAAGTGCGGCGGA CCGCTCCGGCGC ACCCTGAC GCGCCGGAGCGG TTGCTCTCCCCTCAA RPA2411 2736137 - 2737009 + | putative permease of ABC transporter RPA2412 2737021 - 2738085 + | ABC transporter permease TERM 1981 2738221 - 2738262 + G 77 -5.1 -4.63218 | opp_overlap 2738243, overlap 2738243 GCAAGAGCACGCTGT TC-CGGCTGATCCTCGGCG AATACG CGCCG-GGCTCGGGCGAGA TTTTCTTCGCCGGCG TERM 1982 2738300 - 2738322 + G 70 -10.5 -3.67588 | opp_overlap 2738287 CACCGCGCTCAAGTC GTTCGCGCG GATCG CGCGCGGGC TTTCGGTGAAGTTTC RPA2413 2738085 - 2738807 + | putative urea/short-chain amide transport system ATP-binding protein RPA2414 2738800 - 2739513 + | putative urea/short-chain amide transport system ATP-binding protein TERM 1983 2739887 - 2739855 - g 74 -15.5 -2.65815 | TGTACATCGAGAGCA TCGTGCCGCGTGGCC CGC AGCCGCGGGGCACGA CCGTGGTGATGCCGG RPA2415 2739539 - 2740528 + | acetamidase/formamidase RPA2416 2740543 - 2742282 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase RPA2417 2742298 - 2743059 + | putative 3-ketoacyl-CoA reductase TERM 1984 2743618 - 2743600 - f 71 -8.1 -3.96148 | TCCGGTGACGACAAA CGCATCG TAGCC CGACGCG GCGACCAGTGACTCT TERM 1985 2744702 - 2744680 - f 78 -14.9 -3.06696 | overlap 2744661 CCTGCGTCCAACAGA CTGGCGGAC ACCAA GTCCGCCAG TGGAGCATTGAAGTA RPA2419 2745582 - 2747036 + | outer membrane protein, porin TERM 1986 2747062 - 2747095 + T 87 -18.9 -2.69319 | opp_overlap 2747068, overlap 2747068 TCGAAGCGCGAATCT GACGAACCCCGGCGG GCAA CCGCCGGGGTTTTTC GTTGTCTCCCGAATT TERM 1987 2747089 - 2747068 - T 93 -18.7 -3.18681 | opp_overlap 2747062 2747068 CGCGAATCTGACGAA CCCCGGCGG GCAA CCGCCGGGG TTTTTCGTTGTCTCC TERM 1988 2747068 - 2747089 + T 100 -18.7 -4.96646 | opp_overlap 2747068, overlap 2747062 CGCGAATCTGACGAA CCCCGGCGG GCAA CCGCCGGGG TTTTTCGTTGTCTCC RPA2420 2749574 - 2747337 - | lytic transglycosylase, catalytic TERM 1989 2747615 - 2747643 + g 73 -12.3 -3.36327 | AGTCCTCGATCAGGC CGCCGAGTTCGGC GGC GCCGAGCGCTGCG TTGTAAATCGAATCG TERM 1990 2749786 - 2749765 - H 100 -14.4 -5.07652 | GCGTGCAAAACAAAA GCGGCGCC GGTGAG GGCGCCGC TCGCGAAACAACCAA RPA2421 2750691 - 2751101 + | NADH dehydrogenase TERM 1991 2751115 - 2751140 + T 86 -15.4 -3.54424 | GAGTTTTCTCGCTCC CGCGGCGGCC CCGACA GGCCGTCGCG TTTAACCGCGTAGCA RPA2422 2751831 - 2751142 - | hypothetical protein TERM 1992 2751689 - 2751732 + g 70 -10.2 -3.66178 | overlap 2751687 GGCAGCATCAGCGCG GTGTCGCTGGTGACCGGGGC CATC GTCTTGGCCACCAGATACAC TTTCGCGTTCGGCAG TERM 1993 2752242 - 2752222 - g 78 -13.9 -3.53224 | opp_overlap 2752222 2752237 CAGGCCTTTCTGAAA GCCGCCGCG AAG CGCGGCTGC CGCATCGCCAGCGTC RPA2423 2751955 - 2752893 + | AraC family transcriptional regulator RPA2424 2754342 - 2752915 - | agarase TERM 1994 2754229 - 2754188 - G 81 -10.8 -4.15044 | gap 1, overlap 2754189 TCGGTCCGGAAGAAA CCGCTGGCTTCGGCCTTGC GATCG GCAAGGCCGCC-CCAGCGC GTGCGTGCAAGTTCA TERM 1995 2754228 - 2754189 - G 73 -14.3 -3.08812 | gap 1, overlap 2754188 CGGTCCGGAAGAAAC CGCTGGCTTCGGCCTTGC GATCG GCAAGGCCGCC-CCAGCG CGTGCGTGCAAGTTC RPA2425 2755300 - 2754356 - | putative lipase/esterase TERM 1996 2755345 - 2755368 + H 77 -13.1 -3.54129 | overlap 2755365 CGGGGCTTGCTTATT CCGCGGCGG TCAGGC CCGCCGTGG TTTGAAACCAATATC TERM 1997 2756057 - 2756045 - g 95 -9.1 -5.07486 | overlap 2756047 GATCGTGAACAAAAA GGCGA GCT TCGCC GGCCTCGACAAGATC RPA2426 2755533 - 2756522 + | hypothetical protein RPA2427 2757967 - 2756723 - | serine protease RPA2428 2758351 - 2758031 - | hypothetical protein aat 2759158 - 2758475 - | leucyl/phenylalanyl-tRNA--protein transferase RPA2430 2760640 - 2759213 - | hypothetical protein RPA2431 2761344 - 2760673 - | hypothetical protein RPA2432 2762568 - 2761477 - | signal transduction histidine kinase TERM 1998 2762262 - 2762299 + g 77 -11.3 -3.76373 | gap 1, opp_overlap 2762264, overlap 2762264 TGTCCTTGACCAGAT AATCGTCGGCACCG-GCT TTC AGCGCGGTGACGGCGATC TTTGAATCTTGCGAG TERM 1999 2762264 - 2762297 + g 77 -13.9 -3.4647 | gap 1, opp_overlap 2762264, overlap 2762262 TCCTTGACCAGATAA TCGTCGGCACCG-GCT TTC AGCGCGGTGACGGCGA TCTTTGAATCTTGCG TERM 2000 2762297 - 2762264 - G 72 -11.7 -3.54475 | gap 1, opp_overlap 2762262 2762264 TCCTTGACCAGATAA TCGTCGGCACCG-GCT TTC AGCGCGGTGACGGCGA TCTTTGAATCTTGCG RPA2433 2763008 - 2762565 - | response regulator receiver (CheY-like protein) RPA2434 2764537 - 2763005 - | multi-sensor signal transduction histidine kinase accC 2766077 - 2764725 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 2001 2765577 - 2765603 + g 72 -11.4 -3.53012 | overlap 2765587 GTGGGCGACCTTCAT GCCGCGGCCGCC GCC GCCCGCTGCGGC TTTGACCAGCACCGG accB 2766689 - 2766195 - | acetyl-CoA carboxylase biotin carboxyl carrier protein TERM 2002 2766632 - 2766664 + g 95 -11.1 -4.52857 | overlap 2766634 TCAGGCTGCTGTCGT CGGTCGCCGGGGCGG TGG TCGGCTCGGCGGCGG TTTTCTCTGCAGGCT aroQ2 2767183 - 2766728 - | 3-dehydroquinate dehydratase TERM 2003 2767460 - 2767433 - R 83 -17 -2.53263 | CCCATGCGGAATGCA CAGGGGACGGCC GGGT GACCGCCCCCTG GATCGGAATGCCTTG RPA2438 2768148 - 2767477 - | hypothetical protein RPA2439 2768379 - 2768627 + | hypothetical protein TERM 2004 2769215 - 2769265 + G 76 -14.9 -3.17527 | overlap 2769213 AGCTCAGGGAACGCT TTTCGTTCGGCCTCTGGCACC-TCG AGC CGATGGTGCTCG-GGCTGAACGGAA TCTTGCTGATCAGTG RPA2440 2768965 - 2769918 + | cation efflux protein TERM 2005 2770327 - 2770359 + G 80 -14.1 -3.6608 | overlap 2770328 ACCGCGCGCTGGCCG ATGCAGGTGTGTCCG ATG CGGACGCACCTGCCG TTTGCCTCGCCTGGT TERM 2006 2770328 - 2770358 + G 85 -17.6 -2.79327 | overlap 2770327 CCGCGCGCTGGCCGA TGCAGGTGTGTCCG ATG CGGACGCACCTGCC GTTTGCCTCGCCTGG RPA2441 2769906 - 2770598 + | TetR family transcriptional regulator RPA2442 2771450 - 2770683 - | DSBA oxidoreductase TERM 2007 2771623 - 2771587 - R 100 -25.2 -3.05384 | overlap 2771563 2771608 2771613 GCCGGTGCGACGCAA CGACGCCGGCGCCCGG GAGAA CCGAACGCCGGCGTCG TCAGATCGCGTGCCG RPA2443 2772330 - 2771641 - | antioxidant protein TERM 2008 2772403 - 2772453 + r 100 -22.8 -2.91912 | opp_overlap 2772409 2772410, overlap 2772406 2772408 2772409 TCGCAAAAGCATCTG CAAAAAGCATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATGAATGTTG TGTCTCGGTACGTCG TERM 2009 2772406 - 2772450 + r 100 -18.7 -3.60525 | opp_overlap 2772409 2772410, overlap 2772403 2772408 2772409 CAAAAGCATCTGCAA AAAGCATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATGAATG TTGTGTCTCGGTACG TERM 2010 2772408 - 2772448 + r 100 -21.3 -3.37912 | opp_overlap 2772409 2772410, overlap 2772406 2772403 2772409 AAAGCATCTGCAAAA AGCATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATGAA TGTTGTGTCTCGGTA TERM 2011 2772447 - 2772409 - R 100 -24.8 -4.60889 | opp_overlap 2772409 2772408 2772406 2772403, overlap 2772410 AAGCATCTGCAAAAA GCATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATGA ATGTTGTGTCTCGGT TERM 2012 2772409 - 2772447 + r 100 -24.8 -2.62265 | opp_overlap 2772409 2772410, overlap 2772408 2772406 2772403 AAGCATCTGCAAAAA GCATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATGA ATGTTGTGTCTCGGT TERM 2013 2772446 - 2772410 - R 100 -28.3 -3.3581 | opp_overlap 2772409 2772408 2772406 2772403, overlap 2772409 AGCATCTGCAAAAAG CATCGAGCGGTGCATGA TGG TCATGCACCGCTCGATG AATGTTGTGTCTCGG RPA2444 2772871 - 2772482 - | hypothetical protein RPA2445 2774484 - 2773057 - | peptidase M48, Ste24p TERM 2014 2773605 - 2773629 + g 72 -14.3 -3.05384 | TGTTCGACGCCGGAT AGCGCCGATAC ACC GTATCGGCGCG TTCCATGAAGCCCGA TERM 2015 2773947 - 2773973 + g 72 -12.9 -3.08679 | GCCGGATCACTTCCT GCGGCGCGGTG ATCGC CGCCGCGCCGA TATTGGCTGCGCCGC RPA2446 2774592 - 2775782 + | aminotransferase, class I and II RPA2447 2775881 - 2776498 + | biotin synthase dctA2 2776597 - 2777934 + | C4-dicarboxylic acid transport protein TERM 2016 2777962 - 2777995 + T 77 -13.2 -3.54935 | gap 1, overlap 2777951 AATACTCGCTCTGAT CGTGTGATGCCCGCG CTCGT CGCGGGCATCG-GCG TTTGGGGGGCGTTTC RPA2449 2779055 - 2778036 - | hypothetical protein TERM 2017 2778813 - 2778838 + g 72 -4.7 -4.5442 | overlap 2778814 2778816 CTGAGACGACAGCGC GTGGTTGGCAT GGCG GTGCCAACTAA TTTTGTACTTGCAGA TERM 2018 2779145 - 2779115 - R 100 -14.1 -4.56597 | opp_overlap 2779120, overlap 2779120 TCGGCGGCTGAAAAA GAAAATGCCCGCG GCGTG CGCGGGCATTTTG GAGGCTGTTGTCTTG TERM 2019 2779140 - 2779120 - R 100 -14 -5.26119 | opp_overlap 2779120, overlap 2779115 GGCTGAAAAAGAAAA TGCCCGCG GCGTG CGCGGGCA TTTTGGAGGCTGTTG TERM 2020 2779120 - 2779140 + r 93 -14 -4.11371 | opp_overlap 2779120 2779115 GGCTGAAAAAGAAAA TGCCCGCG GCGTG CGCGGGCA TTTTGGAGGCTGTTG rne 2782324 - 2779169 - | ribonuclease, Rne/Rng family TERM 2021 2779713 - 2779760 + g 73 -13.2 -3.31792 | gap 1 TCCGCATTGCCGCGA CGGCG-ACGGCCACCGCGACGAC CGC GGCGGCGCGGACGGCGTTCGCCG TTCTCGCCCTGGTCG TERM 2022 2781260 - 2781286 + g 71 -12.2 -3.34013 | overlap 2781254 CGACAGGTAGGTGGT GAGCGCAGCACC CTT GTTGCCGCGCTC TTCCTTGACGACCTG TERM 2023 2781978 - 2782013 + g 79 -3.9 -4.90079 | overlap 2781992 2782002 CGGCGGCGATGGCTG CGATGCCGCG-ACCGGC GGCG GCTGGAGCGCTGC-TCG TTTTCTTCTTCGGCT TERM 2024 2782381 - 2782358 - H 74 -11.7 -3.53761 | gap 1, overlap 2782373 GAAGCGCGCGCGAAA CGGCTCGCGC AAGCA GCGCG-GCCG GCAGACGCGACGGTC TERM 2025 2782494 - 2782477 - H 73 -11.3 -3.57462 | opp_overlap 2782467 2782464 GAGGCGACGCGCAAA GCGAAGC GAGA GCTTCGC GGCGGCGCGGCCTTT TERM 2026 2783069 - 2783084 + G 79 -4 -4.87665 | gap 1 GTACTGTGCAATCCG TGCGTGC GCT GCA-GCA TTTTTGTGCCTGGCG RPA2451 2782905 - 2784335 + | N-acetylmuramoyl-L-alanine amidase RPA2452 2784555 - 2787053 + | penicillin-binding protein 1A TERM 2027 2787060 - 2787094 + F 79 -13.7 -3.53012 | gap 1, overlap 2787084 CTTTACTAGCCCACG GC-CAATCGCCGCG CGGTTGAT CGCGGCGATTGCGC TTTGCCGCCGCGACC prfB 2787334 - 2788302 + | peptide chain release factor 2 TERM 2028 2788502 - 2788486 - g 72 -15.1 -2.71011 | AGCCCGGCTGAAGCA GCGCGCG ACG CGCGCGC CATCCTCACAATGGT RPA2454 2788309 - 2789202 + | putative dehydrogenase RPA2455 2790699 - 2789329 - | peptidase M23B RPA2456 2791485 - 2790796 - | bacterioferritin co-migratory protein TERM 2029 2791351 - 2791405 + g 100 -23.4 -3.22223 | overlap 2791307 2791365 TGCAGCGGGTGACTT GGCGGCGGCCTTCTTCACCGCCGTGG TTT TCGCGGCGGTGGTCTTGGCCGCCGCC TTCGTCGTCACCTTG TERM 2030 2795396 - 2795369 - g 83 -9 -4.3739 | overlap 2795372 CACCGGCCGACAAAA TAACGGCGCCGA TTTC CCGGCGCCGCCC AACTAATCAGATAAC TERM 2031 2795393 - 2795372 - g 100 -15.1 -4.30995 | overlap 2795369 CGGCCGACAAAATAA CGGCGCCGA TTTC CCGGCGCCG CCCAACTAATCAGAT RPA2457 2791680 - 2795402 + | hypothetical protein TERM 2032 2795472 - 2795520 + T 81 -13.2 -3.68351 | gap 1, opp_overlap 2795469 2795484, overlap 2795473 AGCCCGATCACAGGC TCCG-CGAAGCAATCCAGCTCGG TACA CGGAGTTGGATTGCCTCGTCGGC TTTGCCTCCTCGCAA TERM 2033 2795473 - 2795519 + T 81 -16.7 -2.80796 | gap 1, opp_overlap 2795469 2795484, overlap 2795472 GCCCGATCACAGGCT CCG-CGAAGCAATCCAGCTCGG TACA CGGAGTTGGATTGCCTCGTCGG CTTTGCCTCCTCGCA RPA2458 2796111 - 2795551 - | cytochrome B561 TERM 2034 2796183 - 2796147 - R 74 -5 -4.62069 | gap 1, opp_overlap 2796170, overlap 2796131 2796130 2796149 GCGGCACGTCAAAAA CCGCCGCGCGAGCAGCC CACC GGATGAT-GCCCGGCAG AGCCGCGGCAGCGAT RPA2459 2797549 - 2796332 - | putative permease tyrS 2798890 - 2797634 - | tyrosyl-tRNA synthetase anmK 2799048 - 2800151 + | anhydro-N-acetylmuramic acid kinase RPA2462 2800853 - 2800206 - | hypothetical protein TERM 2035 2800359 - 2800385 + g 73 -3.7 -4.59773 | gap 1, overlap 2800365 CTCGACCAGGGTGTT GACGTCCTTGGC CGGC GCCACG-ATGTC TTTTTCGCCATGGAC TERM 2036 2800961 - 2800922 - H 70 -11.9 -3.14132 | GGGTCCTGCCAGCAA CGGCCGCCGGCTGCCGC AACGCG GAGGGGGCAGGCGGCCG GCGGAAACGGGGAGC nifS1 2801091 - 2802263 + | aminotransferase, class V TERM 2037 2803644 - 2803617 - g 70 -9.9 -3.73783 | gap 1 CATCGAAGCCAAGAA CGCCTCGACGCT GTTCG AGCA-CGAGGCG ACCACGTCGAAGATC sufB 2802346 - 2803827 + | cysteine desulfurase activator complex subunit SufB sufC 2803960 - 2804718 + | FeS assembly ATPase SufC sufD 2804742 - 2806055 + | FeS assembly protein SufD TERM 2038 2806701 - 2806731 + G 83 -12.6 -4.1523 | overlap 2806718 AGGCAGCGGTGCATC TCGCCATCGACGTC CAG GACATCGATTGCGA TTTCTATGTGATGAC sufS 2806052 - 2807299 + | cysteine desulfurases, SufS subfamily RPA2468 2807296 - 2807664 + | hypothetical protein RPA2469 2807693 - 2808088 + | putative lactoylglutathione lyase RPA2470 2808218 - 2808589 + | hypothetical protein TERM 2039 2808633 - 2808659 + F 95 -21 -3.39505 | CGCTCCCAACGTGTA TAGCGCGCGGTA CGC TACCGCGCGCTA TTGTCCATGTCCCAT RPA2471 2808744 - 2810708 + | hypothetical protein TERM 2040 2811112 - 2811140 + G 79 -17.5 -2.52464 | overlap 2811104 2811100 GCTCGAACTCGGCGA TGGCCGCGTCG TGTTCGC CGACGCGGCCA TCGATTGCAGCGGCC RPA2472 2810714 - 2811814 + | hypothetical protein TERM 2041 2811913 - 2811887 - g 70 -10.8 -3.53012 | overlap 2811888 2811890 TCGCGGCCGCCGAAA CCAGCGCGGTGA AGA TCATCGCGCCGA CCGACAAGACGATCA TERM 2042 2812098 - 2812062 - g 71 -12.1 -3.30124 | overlap 2812064 GCGGATGTTCGACAA CATGCTGGCTGCGGCCG AAG CGGCCGGCGCCACCAAG GCCGATGCGGTGCGG TERM 2043 2812096 - 2812064 - g 73 -13.3 -3.21924 | overlap 2812062 GGATGTTCGACAACA TGCTGGCTGCGGCCG AAG CGGCCGGCGCCACCA AGGCCGATGCGGTGC RPA2473 2811811 - 2812284 + | translation initiation inhibitor RPA2474 2812370 - 2814040 + | o-linked GlcNAc transferase RPA2475 2814065 - 2814661 + | TfoX, N-terminal TERM 2044 2814656 - 2814640 - T 75 -13.7 -3.10715 | overlap 2814625 GGCAGCAGCAGCGAA GCGCAGC CGG GCTGCGC GCTGACGCCGACGTC RPA2476 2815737 - 2814670 - | putative diguanylate cyclase (GGDEF) TERM 2045 2814833 - 2814862 + g 70 -8.5 -3.96068 | gap 1 ACGCCGGCCGATAGC GTCACCCGGCCGAG GAT CTCG-CCGGTCGAC TTCTTCTTCAGCTCC TERM 2046 2815407 - 2815442 + g 71 -14.8 -2.67143 | gap 1, overlap 2815397 2815397 GATCGTCGCCGAAGC TGGCGGTGTT-GCCGAG CGT CTCGGCGAGCAGCGCCA TGATGTCGTCGATCT RPA2477 2817254 - 2815836 - | ATP-dependent RNA helicase TERM 2047 2817050 - 2817060 + g 72 -8.2 -4.10161 | overlap 2817046 GGGGCATGCGAGCCC GGGC GCG GCCC TTTTCCAGCATCGTC RPA2478 2818619 - 2817528 - | AraC family transcriptional regulator TERM 2048 2819211 - 2819188 - g 79 -3 -5.0538 | gap 1, opp_overlap 2819171 2819189, overlap 2819189 GCGCAGGCGAAAAAA GGCCTGCCGCA ATT TGCCGC-GGAC TTCGATCGGATCGAT RPA2479 2818822 - 2820561 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 2049 2820695 - 2820724 + F 73 -11.4 -3.54424 | gap 1 TTCTGACCGACTATG GCGCAGGCGGACG CGATC CGGCCGCCT-CGC TTTGAGGGACTGGAA RPA2480 2820739 - 2822244 + | hypothetical protein RPA2481 2823135 - 2822299 - | XRE family transcriptional regulator RPA2482 2823234 - 2824139 + | epimerase/dehydratase RPA2483 2824552 - 2824175 - | hypothetical protein RPA2484 2825053 - 2824583 - | hypothetical protein aqpZ 2825375 - 2826097 + | aquaporin Z parE 2828194 - 2826143 - | DNA topoisomerase IV subunit B RPA2487 2828652 - 2829182 + | DedA family membrane protein TERM 2050 2829756 - 2829729 - g 73 -13.4 -3.29471 | opp_overlap 2829726 CGGCGACCACATCAA CGGCCTGCTCGA TGCG TCGGGCAAGCCG GCGTTTCCGAACGCC TERM 2051 2830240 - 2830208 - g 70 -9.8 -3.71913 | gap 1, overlap 2830206 2830209 GCCACATTGAAAAGA CCGCCGACGGCTACC GCAT GGT-GCCGTCGCCGT GGAATCCGGTGATCT RPA2488 2829268 - 2830257 + | hypothetical protein TERM 2052 2830408 - 2830461 + T 83 -14.3 -3.40403 | gap 1 ATGACCGAGTGTCAG GCCGCGAGCCGCGGGGCGAGGTGGCG GAT CAGCGCCACGCCCTCCGGCG-GCGGC TTCTGCTCGACCCGG RPA2489 2830949 - 2830404 - | hypothetical protein TERM 2053 2830574 - 2830590 + g 70 -6.5 -4.1899 | CGTGATGTCCGAGCA GCAGCTC GTT GAACTGC TTTTCGCTGAGCTCG RPA2490 2831398 - 2832063 + | hypothetical protein argC 2832078 - 2833073 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2054 2833090 - 2833126 + F 95 -15.3 -4.09685 | gap 1, opp_overlap 2833092, overlap 2833092 TCTCCGCTGCTAAGC T-ACGTGGCTCCCGTC TCCCGC GGCGGGAGCCACGTCA TTTTGGAACCTGACA TERM 2055 2833092 - 2833123 + F 93 -19.5 -3.08508 | opp_overlap 2833092, overlap 2833090 TCCGCTGCTAAGCTA CGTGGCTCCCGTC TCCCGC GGCGGGAGCCACG TCATTTTGGAACCTG TERM 2056 2833123 - 2833092 - f 83 -17.3 -2.52464 | opp_overlap 2833092 2833090 TCCGCTGCTAAGCTA CGTGGCTCCCGTC TCCCGC GGCGGGAGCCACG TCATTTTGGAACCTG RPA2492 2833129 - 2833740 + | hypothetical protein RPA2493 2833995 - 2835791 + | P-methylase TERM 2057 2835807 - 2835853 + F 86 -12.9 -4.07568 | gap 1 GCGACTGCTGCTTGT CCCCGTCATTCCGGG-GCGCGC GCGA GCGCGAACCCGGAATCTCGCGG TTTTCGCCAAGGAAG RPA2494 2836026 - 2836388 + | hypothetical protein RPA2495 2836791 - 2836393 - | translation initiation inhibitor RPA2496 2837836 - 2837138 - | GntR family transcriptional regulator RPA2497 2838147 - 2838935 + | putative anion ABC transporter, ATP-binding protein RPA2498 2838935 - 2839813 + | ABC transporter permease RPA2499 2839879 - 2840856 + | ABC transporter periplasmic protein TERM 2058 2840895 - 2840868 - f 100 -19.2 -3.59315 | gap 1, opp_overlap 2840868 GTAACCAGGCCGAAA CGCCGGCGATCCG AGA CGG-TCGCCGGCG TTGTCTTCTCAAGTC TERM 2059 2840868 - 2840895 + F 100 -19.2 -3.75824 | gap 1, opp_overlap 2840868 GTAACCAGGCCGAAA CGCCGGCGATCCG AGA CGG-TCGCCGGCG TTGTCTTCTCAAGTC TERM 2060 2841341 - 2841363 + G 72 -14.8 -2.79183 | opp_overlap 2841308 2841307, overlap 2841341 GGCTCGTCGAGCGGG TCGGCCGCCG CGG TGGCGGCCGG TATCGTGCCGATGGC RPA2500 2840927 - 2842204 + | amidase TERM 2061 2842250 - 2842205 - T 82 -14.6 -3.33696 | opp_overlap 2842199 2842199 2842214 GCGCTGGCGAACTAA CTTGAGCGACGTGCGGCTGC TGCTTC GCCGCCGCGCGTCGTTCAGG ATCGCACTTTAACGT phbC 2844051 - 2842246 - | Poly(R)-hydroxyalkanoic acid synthase, class I RPA2502 2844378 - 2844683 + | hypothetical protein TERM 2062 2844855 - 2844830 - f 71 -9.1 -3.71848 | gap 1 CCCTCCGATCAAGAA CGCGGTAACGAT CCC ACCGTTACC-CG GAGTCGAGGACCATG RPA2503 2844868 - 2846088 + | aminotransferase HDH 2846167 - 2847492 + | homoserine dehydrogenase TERM 2063 2847655 - 2847633 - g 79 -16.2 -3.05384 | opp_overlap 2847616 GTGCGCGTGACCGAA CGCGCCGCGG TGT CTGCGGCGCG GCTGCGCGGCCACGG glpX 2847555 - 2848559 + | fructose 1,6-bisphosphatase II TERM 2064 2848555 - 2848591 + F 83 -9.5 -4.34402 | opp_overlap 2848560, overlap 2848553 2848557 2848560 AGAAGTTCCACCTCG ATTAAGTCGAATCCGAT TTC ATCGGTTTCGACTTACG TTTTGCTGTAACGCG TERM 2065 2848557 - 2848589 + F 79 -16.5 -2.51871 | opp_overlap 2848560, overlap 2848553 2848555 2848560 AAGTTCCACCTCGAT TAAGTCGAATCCGAT TTC ATCGGTTTCGACTTA CGTTTTGCTGTAACG TERM 2066 2848586 - 2848560 - f 76 -13.8 -3.15544 | opp_overlap 2848553 2848560 2848557 2848555 TTCCACCTCGATTAA GTCGAATCCGAT TTC ATCGGTTTCGAC TTACGTTTTGCTGTA TERM 2067 2848560 - 2848586 + F 79 -13.8 -3.40592 | opp_overlap 2848560, overlap 2848553 2848557 2848555 TTCCACCTCGATTAA GTCGAATCCGAT TTC ATCGGTTTCGAC TTACGTTTTGCTGTA RPA2506 2848668 - 2849111 + | acetyltransferase RPA2507 2849176 - 2849901 + | haloacid dehalogenase, type II TERM 2068 2850048 - 2850070 + G 71 -9.1 -3.87815 | gap 1, overlap 2850049 CTCCCATCTCCGTTT TGCCGGC-CG AGAC CGTGCCGGCG TTTCTCGGCGTGACC recJ 2849930 - 2851867 + | single-stranded-DNA-specific exonuclease RecJ RPA2509 2852321 - 2852031 - | hypothetical protein RPA2510 2853524 - 2852406 - | hypothetical protein TERM 2069 2853396 - 2853375 - G 73 -12.3 -3.41073 | overlap 2853373 GAGGTGATCGAAATA CGCGCCGAT CAGC ATCGGCACG CCCGCGGCCAGTGCC RPA2511 2854771 - 2853542 - | lytic murein transglycosylase RPA2512 2854994 - 2855974 + | putative lipid kinase TERM 2070 2856023 - 2856003 - T 100 -15.4 -4.72986 | opp_overlap 2856003 CATGCCCACGAAAAA GCCCGCCG GGATG CGGCGGGC TTTGCGGGAGTCAGC TERM 2071 2856003 - 2856023 + T 86 -15.4 -3.54424 | opp_overlap 2856003 CATGCCCACGAAAAA GCCCGCCG GGATG CGGCGGGC TTTGCGGGAGTCAGC efp 2856619 - 2856053 - | elongation factor P TERM 2072 2857645 - 2857677 + G 71 -9 -3.86015 | opp_overlap 2857638 GACGAGAAGGAGCGG CGCTACGGTGAGCG CTATC CGCTCGACGAGGCG TTTCTCGCGGCAGTC RPA2514 2856757 - 2857812 + | putative lysyl-tRNA synthetase kamA 2857809 - 2858900 + | hypothetical protein RPA2516 2859061 - 2859321 + | hypothetical protein TERM 2073 2859343 - 2859300 - T 100 -22.6 -3.37245 | gap 1, opp_overlap 2859320 2859323, overlap 2859302 CGACCGCAAGATCAA GAGCATCTGCCGCGGCTGCTG ACT CAG-AGCCGCGGCAGACGCTG CCGGCTCAGGTACTC TERM 2074 2859341 - 2859302 - T 100 -25.2 -3.25341 | gap 1, opp_overlap 2859320 2859323, overlap 2859300 ACCGCAAGATCAAGA GCATCTGCCGCGGCTGCTG ACT CAG-AGCCGCGGCAGACGC TGCCGGCTCAGGTAC RPA2517 2859939 - 2859349 - | hypothetical protein RPA2518 2860251 - 2860388 + | hypothetical protein RPA2519 2860446 - 2860673 + | hypothetical protein TERM 2075 2861184 - 2861211 + T 100 -12.6 -4.81863 | opp_overlap 2861184 CTTCCCAATCCATAA CCGCCGGTAGAG CACT CGCTCCCGGCGG TTTTCTTCTGGGTTT TERM 2076 2861211 - 2861184 - T 76 -12.6 -3.41878 | opp_overlap 2861184 CTTCCCAATCCATAA CCGCCGGTAGAG CACT CGCTCCCGGCGG TTTTCTTCTGGGTTT RPA2520 2861799 - 2861230 - | hypothetical protein RPA2521 2862192 - 2862401 + | hypothetical protein TERM 2077 2862457 - 2862473 + F 78 -6.6 -4.64676 | TAGGGCTGGAAGATT TCAAGC TAAGC GCTTGA TTTTGTTGGCGCTCC TERM 2078 2862920 - 2862910 - g 70 -8.2 -3.98762 | AAGGACAAGACCAAA CGCG AGC CGCG CAAATCGGTGAGGCA RPA2522 2862889 - 2863146 + | hypothetical protein TERM 2079 2863221 - 2863193 - T 100 -19 -4.55287 | opp_overlap 2863197, overlap 2863197 CCGAGGCAGATAAAA GAAAGGCTCCGC TGCTC GCGGAGCCTTTC TTGGAATTGACGATA TERM 2080 2863217 - 2863197 - T 100 -14 -4.83243 | opp_overlap 2863197, overlap 2863193 GGCAGATAAAAGAAA GGCTCCGC TGCTC GCGGAGCC TTTCTTGGAATTGAC TERM 2081 2863197 - 2863217 + T 93 -14 -4.20918 | opp_overlap 2863193 2863197 GGCAGATAAAAGAAA GGCTCCGC TGCTC GCGGAGCC TTTCTTGGAATTGAC RPA2523 2863936 - 2863487 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2082 2863537 - 2863547 + g 72 -8.2 -4.08216 | overlap 2863530 GCTCCTGCGGCGGCA GGGC TTC GCCC TTTTGCAGCAGCTCG TERM 2083 2864092 - 2864063 - H 100 -19.5 -4.18506 | opp_overlap 2864066, overlap 2864066 GGAGGTGCAAAACAA TAAGGTCTGGAGC CGGG GCTCCAGACCTTA TGCTCGCTCGGGGGA TERM 2084 2864089 - 2864066 - H 100 -16.8 -4.20868 | opp_overlap 2864066, overlap 2864063 GGTGCAAAACAATAA GGTCTGGAGC CGGG GCTCCAGACC TTATGCTCGCTCGGG TERM 2085 2864066 - 2864089 + H 89 -16.8 -3.4252 | opp_overlap 2864063 2864066 GGTGCAAAACAATAA GGTCTGGAGC CGGG GCTCCAGACC TTATGCTCGCTCGGG TERM 2086 2864159 - 2864119 - H 70 -11.8 -3.14931 | gap 1, opp_overlap 2864119 2864130 2864130 GGGAGGTGTGACGAA CGGGACGCAGCGGC-GCCG AGCA CGGCGGCCTTTGCATCCCA TCGCTTCCGGACAGC TERM 2087 2864214 - 2864185 - H 93 -9.3 -4.74132 | opp_overlap 2864185 ACAGCCGACGAAAAA GAGCCCCGC CTTGGAGGTCGC GCGGGGCTC TTTCAGAGGAGGTCA RPA2524 2864429 - 2865190 + | Sir2 family ADP ribosyltransferase TERM 2088 2865345 - 2865364 + F 76 -7.8 -4.25056 | opp_overlap 2865343, overlap 2865346 GCTCGGCGAATCATC CTCGTCGC GGAA GCGACGAA TTTGTTGATGACGTG cspA2 2865394 - 2866101 + | cold-shock DNA-binding domain protein TERM 2089 2866123 - 2866142 + F 93 -16.4 -3.71848 | opp_overlap 2866123 CGCCCAGAGGGCAAA CGGCGCGC ACAC GCGCGCCG TTCTTGATCGCGCCA TERM 2090 2866142 - 2866123 - f 91 -16.4 -3.63627 | opp_overlap 2866123 CGCCCAGAGGGCAAA CGGCGCGC ACAC GCGCGCCG TTCTTGATCGCGCCA RPA2526 2866285 - 2866770 + | hypothetical protein RPA2527 2868930 - 2867308 - | DNA-dependent RNA polymerase TERM 2091 2867599 - 2867617 + g 79 -3.1 -5.10208 | gap 1 GAGCGGCTTGCCCCG GCTG-TCC GTGA GGATCGGC TTTTTCTTCGGATTC TERM 2092 2869207 - 2869235 + G 71 -13.9 -2.87564 | opp_overlap 2869207 GTGCGGGATGTAGAA CTGCTCAAGCCCT GCG AGGGCTTCAGCGG TCTATGCAGCCATCC TERM 2093 2869235 - 2869207 - g 70 -11.7 -3.35679 | opp_overlap 2869207 GTGCGGGATGTAGAA CTGCTCAAGCCCT GCG AGGGCTTCAGCGG TCTATGCAGCCATCC RPA2528 2869057 - 2869569 + | hypothetical protein RPA2529 2869607 - 2869996 + | hypothetical protein RPA2530 2870046 - 2870819 + | hypothetical protein RPA2531 2870915 - 2871193 + | hypothetical protein TERM 2094 2871366 - 2871351 - f 71 -4.6 -4.41548 | opp_overlap 2871351 GGATAGGCCACAAAA GCCTGA TCCT TCCGGC TTGACTACCGGAACG RPA2532 2871455 - 2872216 + | hypothetical protein RPA2533 2872381 - 2872800 + | hypothetical protein RPA2534 2872797 - 2873579 + | hypothetical protein RPA2536 2876498 - 2875224 - | putative OpgC protein waaG 2874172 - 2875290 + | putative UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase RPA2537 2876741 - 2877046 + | ETC complex I subunit region TERM 2095 2877416 - 2877389 - g 71 -14.8 -2.54325 | overlap 2877388 2877384 GCGCGCCAAACATAC CGCGCGCGGCAA GCTG CTGCCGCGCGAG CGCGTCGATCTGCTG TERM 2096 2878416 - 2878394 - g 74 -5.4 -4.57073 | overlap 2878395 2878397 CATGGTCGGCAAAAA GTACGAGGCC GGC GGCATCGCCC GCGACGGCGCCAAGC TERM 2097 2878519 - 2878538 + G 82 -4.8 -4.89852 | opp_overlap 2878508, overlap 2878521 ATTACGGCATGTGCG GCCGGGCG TATT CGCCGCGC TTTTTGTGGATGTGG RPA2538 2877195 - 2878850 + | putative acyl-CoA carboxylase, beta chain TERM 2098 2880012 - 2880030 + G 74 -14.6 -3.01924 | TGCCGGCTATCGCGG CGGCGACA GCG TGTCGCCG TATTACGACGCGATG RPA2539 2878864 - 2880879 + | putative acyl-CoA carboxylase biotin-carrying subunit hmgL 2881000 - 2881905 + | pyruvate carboxyltransferase RPA2541 2883358 - 2882000 - | TRAP dicarboxylate family transporter DctM subunit TERM 2099 2882565 - 2882580 + g 72 -11.8 -3.53444 | AGCAGCGCCAGCAGG CCGCCG AGGC CGGCGG TTTCGGACGGCGTCG RPA2542 2883906 - 2883355 - | TRAP dicarboxylate family transporter DctQ subunit RPA2543 2884922 - 2883903 - | TRAP dicarboxylate family transporter DctP subunit RPA2544 2885193 - 2885432 + | hypothetical protein TERM 2100 2887141 - 2887085 - g 77 -13.6 -3.61178 | TTGATCTACGGCAAA GCCGGCGCGGCGTGGGCGACCG-GCAGC AGC GATGCGCAG-CGCGCAGGCAGCGCCAGC CGCTTCACCGAAAGC RPA2545 2885963 - 2888956 + | outer membrane protein TERM 2101 2889312 - 2889283 - g 72 -13.5 -3.1247 | gap 1 ATCGTGGACACCCAA GTCG-GCACCGGCG CGT CGCCGGCGCGCGGC CAGATCTGCGTGATG RPA2546 2889133 - 2889591 + | peptidylprolyl isomerase TERM 2102 2889606 - 2889627 + T 78 -15.1 -2.71681 | opp_overlap 2889593 2889592 AGGCCGATGATGCGA TGGCCCGGC ACGA GCCGGGCCG TCGTTGCCGCGGTTA RPA2547 2889981 - 2889640 - | hypothetical protein TERM 2103 2890682 - 2890732 + G 78 -15.3 -3.19889 | gap 1 TTCGGTCCGGTGCTG GCGGCGGC-GAGCATCGGGCAGGG CGTT CGCCACCTGCTGCTCGGCCGCCGC TTCAATGTGTTCGTG RPA2548 2890202 - 2891008 + | hypothetical protein RPA2549 2891005 - 2891484 + | hypothetical protein RPA2550 2892042 - 2891485 - | hypothetical protein RPA2551 2892078 - 2892521 + | hypothetical protein TERM 2104 2893286 - 2893303 + T 74 -2.7 -4.84311 | CGTAATGGGCAATTG TGAATTG GCGC CAATGCA TTTTCTTATGTGGCC RPA2552 2893697 - 2893377 - | hypothetical protein TERM 2105 2893768 - 2893737 - H 78 -10.2 -4.07687 | gap 1, opp_overlap 2893745 2893746, overlap 2893744 AGCGTCTGGTCAAAA CGACAAACCTGCCCC CCA GGGGCAA-TTTGGCG GCAAGAACAACTATA TERM 2106 2895684 - 2895712 + G 78 -14.6 -3.32022 | gap 1, overlap 2895672 2895693 ACCGTGGCGTCGCCG GGCGTGCGGTGCC GGCC GGCGCCG-ACGCC TTCGTCTATGCCGAG RPA2553 2894171 - 2899384 + | hypothetical protein TERM 2107 2900461 - 2900475 + G 70 -11.4 -3.35597 | opp_overlap 2900437, overlap 2900460 GATGTCCTCGCCCAT GTCGGC TCG GCCGAC TATTTCGACGATCGC RPA2554 2899381 - 2901576 + | penicillin-binding protein 1C RPA2555 2901627 - 2903372 + | glycosyl transferase family protein RPA2556 2903374 - 2904222 + | phosphoesterase, PA-phosphatase related RPA2557 2904286 - 2905038 + | glycosyl transferase family protein RPA2558 2905038 - 2905376 + | hypothetical protein metC 2906735 - 2905539 - | cystathionine beta-lyase TERM 2108 2907177 - 2907190 + G 70 -3.7 -4.56597 | overlap 2907173 TCTTGCGGCGTCAGC CAGGG ACTG CCCGG TTTTTCGGCGCCCGA aapJ-1 2907057 - 2908073 + | ABC transporter, periplasmic amino acid binding protein aapJ-1 TERM 2109 2908564 - 2908603 + G 77 -10.7 -3.7732 | gap 1 CGCCGTGCTCGGCTC GCTG-CCGTCACCGCGCC AGAGC GTCTCGGTGATGGACAGC TTCTTCCTGTCCAAC TERM 2110 2908789 - 2908828 + G 91 -11.4 -4.18494 | ACTCGGTCTGCTGAT CGGATTGCCGCTGATCGC ATTC GTGATTGTCGGCAAGCCG TTTTCGCTGGAAGTG aapQ-1 2908094 - 2909299 + | polar amino acid ABC transport permease protein aapQ-1 aapM-1 2909296 - 2910801 + | polar amino acid ABC transport permease protein aapM-1 aapP-1 2910817 - 2911557 + | amino acid ABC transporter ATP-binding protein RPA2564 2911851 - 2911582 - | hypothetical protein RPA2565 2912134 - 2911997 - | O-acetylserine (thiol) lyase C-terminal portion TERM 2111 2913242 - 2913232 - g 70 -2.4 -4.70319 | TGACGAAAACGAAAA GGCG GAA CGCT CGAAAATGAAGACGC RPA2566 2912351 - 2913934 + | putative EA59 gene protein, phage lambda RPA2567 2913943 - 2914782 + | EA31 gene protein, phage lambda RPA2568 2915959 - 2914922 - | cysteine synthase A cfa1 2917299 - 2916070 - | cyclopropane-fatty-acyl-phospholipid synthase RPA2570 2918204 - 2917359 - | hypothetical protein RPA2571 2919519 - 2918206 - | NADPH-dependent oxidoreductase RPA2572 2919954 - 2921402 + | RND efflux system, outer membrane lipoprotein, NodT TERM 2112 2921451 - 2921484 + G 76 -14.5 -3.21416 | CGGGCGTAAAGGATG GGGCGGGCTGCTGCG GCGA CGCAGCGTCTCGCTC TTGCTGGTCGCGCTG RPA2573 2921392 - 2922762 + | membrane protein, permease TERM 2113 2924407 - 2924462 + G 76 -15.4 -2.89564 | gap 1, opp_overlap 2924410, overlap 2924414 GCTGTGGGTGCTGAA GCATCAGCG-CGCCACGCTGGTGGTGA CGT TCCTGACCATCGCGGCGACGCTGGTGC TGTATGCGATCGCGC RPA2574 2922833 - 2925964 + | acriflavin resistance protein TERM 2114 2927889 - 2927913 + G 70 -6.4 -4.1891 | gap 1, overlap 2927899 CCTGCGCCGGCAGCT CAGCCGCGTTG CCGG CATC-CGGCTG TTTATGTTCGCCGCC TERM 2115 2927899 - 2927911 + G 70 -10.5 -3.6944 | overlap 2927889 CAGCTCAGCCGCGTT GCCGG CAT CCGGC TGTTTATGTTCGCCG RPA2575 2925964 - 2929071 + | acriflavin resistance protein RPA2576 2929079 - 2929810 + | hypothetical protein TERM 2116 2930883 - 2930922 + G 72 -15.1 -2.79831 | ATCTTCGCGCTGCCG GCAG-CCGAGCTCAGCCCG GGCG CGGCCTG-GCTCGGGCTGC TCTGCTACACCTTGC TERM 2117 2931219 - 2931234 + G 72 -5.4 -4.35461 | gap 1 ACCTTCGTGGTGTGG GGCC-TG ATA CACGGCC TTTTCCTGATCTTCG RPA2577 2930223 - 2931692 + | putative alginate o-acetyltransferase AlgI RPA2578 2931695 - 2932828 + | alginate o-acetyltransferase AlgJ TERM 2118 2933163 - 2933184 + T 82 -14.4 -3.37344 | opp_overlap 2933163 TGCCCATGAAAAAAA GCCGCCCC AGATGC GGGGCGGC TTGGTTCAATGGCAC TERM 2119 2933184 - 2933163 - T 100 -15.1 -5.52384 | opp_overlap 2933163 TGCCCATGAAAAAAA GCCGCCCCA GATG CGGGGCGGC TTGGTTCAATGGCAC RPA2579 2933600 - 2933211 - | hypothetical protein TERM 2120 2933956 - 2933922 - H 70 -7.9 -4.07568 | gap 1, opp_overlap 2933930 2933949, overlap 2933925 2933930 GTTCGGCGTTGAAAA GCAGAAAACGGTCGAT CCAC ACCGGCCGTTT-CCGC CGCAACGTCGCGGCC TERM 2121 2933949 - 2933930 - H 80 -5.6 -4.67635 | opp_overlap 2933930, overlap 2933925 2933922 TTGAAAAGCAGAAAA CGGTCGAT CCAC ACCGGCCG TTTCCGCCGCAACGT RPA2580 2934119 - 2934784 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 2122 2935573 - 2935525 - g 75 -13.8 -3.25823 | gap 1 GCTGCGGCAGACCAA CGACCGCTTCAACGTCGGCGAGG TGAC CCGCACCGACGTGGC-GCAGTCG CAGGCGCAGCTTGCC RPA2581 2934830 - 2936386 + | TolC family type I secretion outer membrane protein TERM 2123 2936400 - 2936425 + F 91 -15.4 -3.90112 | overlap 2936387 2936401 GATTGCGGCCGCGAC TGCGCCCGGG ATTCTG CCCGGGCGCG TTTGCTTGCAAACAA TERM 2124 2936401 - 2936424 + F 83 -16.7 -2.93853 | overlap 2936387 2936400 ATTGCGGCCGCGACT GCGCCCGGG ATTCTG CCCGGGCGC GTTTGCTTGCAAACA RPA2582 2936679 - 2937467 + | hypothetical protein TERM 2125 2937565 - 2937589 + F 76 -11.3 -3.75402 | opp_overlap 2937565, overlap 2937580 AGCGTCGTCCAACGA GCGCGTCCGCG GCC CGGCGACGCGC CTTTTTTGATTGCAG TERM 2126 2937580 - 2937590 + F 100 -8.2 -5.26875 | opp_overlap 2937565, overlap 2937565 GCGCGTCCGCGGCCC GGCG ACG CGCC TTTTTTGATTGCAGC valS 2937609 - 2940482 + | valyl-tRNA synthetase TERM 2127 2940687 - 2940660 - g 77 -13.4 -3.57144 | opp_overlap 2940669 CTGTCGATCCGCAAA GGCGACAGGCCG GAGC CGGCCTATGGCC GGCACTGGTGCTTCA TERM 2128 2940669 - 2940695 + G 80 -17.2 -2.70932 | opp_overlap 2940660 CGCAAAGGCGACAGG CCGGAGCCGGCC TAT GGCCGGCACTGG TGCTTCAAGGCGACC RPA2584 2940486 - 2940872 + | glyoxalase RPA2585 2941074 - 2941634 + | hypothetical protein TERM 2129 2941690 - 2941661 - T 81 -7.7 -4.41348 | overlap 2941662 2941663 TGCGCCGCAAACAAA CGTCACCCTCCGC GAAA GCGGAGGGTCCAG TATCCCAGAGCGGTC 3mg 2942497 - 2941820 - | 3-methyladenine DNA glycosylase TERM 2130 2942782 - 2942754 - g 77 -8 -4.41494 | CATCGTCAAGGAAAA CGGCCTGCACAC GGTGT GCGAGGAGGCCG GCTGCCCGAATATCG TERM 2131 2943314 - 2943338 + G 70 -9.9 -3.73775 | overlap 2943315 TGCTGCAGGTGATGG ACGACCTGCGC TCG GCGGAGGTCGA TTTCCTCACCATCGG lipA2 2942590 - 2943549 + | lipoyl synthase RPA2588 2943576 - 2944049 + | cyclase/dehydrase cinA 2944751 - 2944131 - | competence damage-inducible protein A ispD 2945950 - 2944754 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase nifR3 2946224 - 2947225 + | dihydrouridine synthase TIM-barrel protein NifR3 ntrB 2947222 - 2948394 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 2132 2949355 - 2949375 + G 81 -3.9 -5.0538 | overlap 2949356 GAGCACATCGAGGAC CTGCCGGAT CTG GTTCGGCAC TTTTTTGCGCTGGCC ntrC 2948404 - 2949846 + | nitrogen metabolism transcriptional regulator NtrC TERM 2133 2950153 - 2950190 + G 74 -10.5 -3.80573 | gap 1 ATCGTCCTGACCGGC CTGACCCCGATCGCCCCG ACC CGGGAAG-TCGTGGTCAG TTTCCTGCTGATCAA TERM 2134 2952046 - 2952035 - g 75 -7.2 -4.41348 | GTCTGCCCAAAGAAA GCCG TTCG CGGC TGCTCGAACCCTACG ntrY 2950006 - 2952297 + | multi-sensor signal transduction histidine kinase ntrX 2952314 - 2953681 + | two component, sigma54 specific, transcriptional regulator, Fis family RPA2596 2953722 - 2954579 + | D-amino acid aminotransferase TERM 2135 2954556 - 2954570 + F 81 -7.1 -4.6971 | CTAAGAGAGCAGTTT CACCG ATTTG CGGTG TTTTCTTAAGCTTTG TERM 2136 2954586 - 2954610 + F 74 -5.5 -4.50193 | overlap 2954588 TTTTCTTAAGCTTTG CGCCGCGGGGA GCA TCCACTCGGGG TTTTAGTTGCTTGCT TERM 2137 2954778 - 2954762 - g 86 -4.4 -5.24129 | gap 1, overlap 2954764 TTGCGGGATAAAAAA TG-GCGG CAGA CCGCGCA CAAAACCTTCAAGAC hfq 2954761 - 2955009 + | RNA-binding protein Hfq RPA2598 2955114 - 2956388 + | GTP-binding protein, HSR1-related gyrA 2956591 - 2959332 + | DNA gyrase subunit A TERM 2138 2959451 - 2959416 - f 77 -15.6 -2.63382 | gap 1, opp_overlap 2959421 2959423, overlap 2959421 TCCGACAGCCAGAAT CGAAAGACCCCCGAG GGGGCAA CTCGGGGGTCTT-CG GTACAGAGCGCCCTT TERM 2139 2959421 - 2959447 + F 81 -15.2 -3.05384 | opp_overlap 2959421 2959416, overlap 2959423 CAGCCAGAATCGAAA GACCCCCGAG GGGGCAA CTCGGGGGTC TTCGGTACAGAGCGC TERM 2140 2959447 - 2959421 - f 90 -15.2 -3.81339 | opp_overlap 2959421 2959423, overlap 2959416 CAGCCAGAATCGAAA GACCCCCGAG GGGGCAA CTCGGGGGTC TTCGGTACAGAGCGC TERM 2141 2959895 - 2959909 + G 81 -7.8 -4.70117 | CGGGCAATTCAGGTT TCGTCG CGT CGGCGA TTTGTTTCTTGGCTT RPA2600 2959517 - 2959936 + | hypothetical protein coaD 2960110 - 2960619 + | phosphopantetheine adenylyltransferase RPA2602 2960636 - 2961199 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2142 2961211 - 2961243 + G 75 -6.8 -4.36914 | ATAGGCGATCCCAAT GCTGCCGCGCCGAC TGAAT GCAGTCGCGGTAGC TTTTCTCGCAGGGGC RPA2603 2961209 - 2961652 + | hypothetical protein RPA2604 2961628 - 2962095 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type queA 2962252 - 2963346 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 2963343 - 2964476 + | queuine tRNA-ribosyltransferase TERM 2143 2965454 - 2965424 - T 71 -13.9 -2.62263 | ATCTTCTGCAGATCA GCCCGGAGCCGGC CAAGT GCCGGCTCCTCGC CGTTGAACAGCAAAT RPA2607 2966176 - 2965553 - | transcriptional regulator TERM 2144 2966716 - 2966678 - R 93 -17.4 -3.48276 | overlap 2966680 TGGCTCTCGATACAA GACGTCCGGCATTGCACG AGC CGTGCGATGCCGGACGAG GTGACCCAACGGGAG TERM 2145 2966714 - 2966680 - R 100 -24.4 -3.31726 | overlap 2966678 GCTCTCGATACAAGA CGTCCGGCATTGCACG AGC CGTGCGATGCCGGACG AGGTGACCCAACGGG RPA2608 2967694 - 2966741 - | sulfonate binding protein TERM 2146 2967185 - 2967233 + g 81 -11.1 -4.09685 | gap 3, opp_overlap 2967171 2967172 AGCCGCGGTGCCATC GGCAGG-CGGCAGGTACACCG-CG GTCA CGTCGGTGAAC-TGCAGGCCTGCC TTTTCGAGAATGGCG RPA2609 2968425 - 2967856 - | monooxygenase ssuB 2969281 - 2968436 - | aliphatic sulfonate ABC transporter ATP-binding protein RPA2611 2970092 - 2969286 - | aliphatic sulfonate ABC transporter permease msuD 2971264 - 2970089 - | alkanesulfonate monooxygenase RPA2613 2972256 - 2971309 - | putative aliphatic sulfonate binding protein, subunit of ABC transporter RPA2614 2972643 - 2973920 + | hypothetical protein nifH2 2973960 - 2974832 + | putative nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase) RPA2616 2974834 - 2976192 + | nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein RPA2617 2976189 - 2977439 + | vanadium nitrogenase associated protein N TERM 2147 2977545 - 2977571 + T 74 -10 -3.80114 | overlap 2977546 TGTGAACTCTCCTTG AGCCGCGACGGC GTC GATGTCGCGGCG TTTGGTGCGTTCGTC TERM 2148 2977546 - 2977570 + T 74 -13.5 -2.87586 | overlap 2977545 GTGAACTCTCCTTGA GCCGCGACGGC GTC GATGTCGCGGC GTTTGGTGCGTTCGT RPA2618 2978587 - 2977601 - | putative sulfonate transport system substrate-binding protein TERM 2149 2977916 - 2977874 - G 73 -9.1 -3.97834 | gap 2 CAACCGCAGTAGAAA GTCCGCGAGCGCAGCGTGCCG CAA CGGGTCG-T-CGATCGCGGAC GGATTGGCCGAGATC TERM 2150 2978120 - 2978107 - G 75 -9.5 -4.05788 | opp_overlap 2978108 2978110, overlap 2978108 TGTCGTTAAAGGAAA GGCCG GCTT CGGCC AGCTGCTTGTAGAGA RPA2619 2978920 - 2980524 + | GMC-type oxidoreductase RPA2620 2980940 - 2980614 - | hypothetical protein RPA2621 2981481 - 2980972 - | hypothetical protein RPA2622 2982289 - 2981510 - | putative sulfonate transport system, ATP-binding protein. subunit of ABC transporter TERM 2151 2982025 - 2982011 - G 79 -11.4 -3.83026 | TCGTTCGAGACCAAA GCCGAC ATT GTCGGC GACGCTCAGCCATGG TERM 2152 2982159 - 2982115 - G 75 -11.4 -3.65812 | gap 1 CGCCGTCCAACACAA TGGTGCCGGCGGTCGCCCGAT CGAG ACCGG-CGATCGCCCGCAGCA AGGTCGACTTGCCGC RPA2623 2983131 - 2982289 - | sulfonate transport system permease protein. subunit of an ABC transporter RPA2624 2984229 - 2983255 - | putative sulfonate transport system substrate-binding protein RPA2625 2985990 - 2984782 - | putative cystathionine or methionine gamma-lyase TERM 2153 2984959 - 2985006 + g 73 -14 -3.14564 | opp_overlap 2984985 2984988 CAGCAGGCTCTTGGT CTTGCCGAGCGAGACCGCGTAG GAGA CGACGCGCATCCGCTCGGCGAG TTGCTCGGCCAATGC RPA2626 2987266 - 2986232 - | hydrolase TERM 2154 2987955 - 2987903 - g 86 -17 -3.28924 | gap 2, opp_overlap 2987926 CACCGCCGGGGACAA TCGCTTC-CGTCCGCCGGTGC-CGCC TGC GGCGTGGACCGGCGAGCGCGACGCGA CGCAGTTCGGTCTGT RPA2627 2987649 - 2989346 + | putative carboxylesterase aapJ-2 2989377 - 2990399 + | polar amino acid ABC transport substrate-binding protein, aapJ-2 TERM 2155 2990477 - 2990519 + G 77 -11.3 -3.84406 | gap 1, overlap 2990478 2990480 CTGCCGAATTGGCTC GGGCCGCGACCGGCGACG CAACTCGC CGTC-CTGGTCGCGGTCA TTGTTCTCGTCGCCA TERM 2156 2990478 - 2990518 + G 73 -14.8 -2.90322 | gap 1, overlap 2990477 2990480 TGCCGAATTGGCTCG GGCCGCGACCGGCGACG CAACTCGC CGTC-CTGGTCGCGGTC ATTGTTCTCGTCGCC TERM 2157 2990480 - 2990516 + G 72 -13.8 -3.00003 | gap 1, overlap 2990478 2990477 CCGAATTGGCTCGGG CCGCGACCGGCGACG CAACTCGC CGTC-CTGGTCGCGG TCATTGTTCTCGTCG aapQ-2 2990420 - 2991589 + | polar amino acid ABC transpor permease protein, aapQ-2 TERM 2158 2991782 - 2991831 + G 74 -10.5 -3.82084 | gap 1, overlap 2991774 2991783 GCAGTTCGGCCGAGT GCGCGGCGCGG-GGCGGCGCATGC TGG GCGTTCGTCGCCGCCAAGCTGCGG TTCTTCCTGTTCGCG TERM 2159 2991783 - 2991830 + G 71 -14 -2.88768 | gap 1, overlap 2991774 2991782 CAGTTCGGCCGAGTG CGCGGCGCGG-GGCGGCGCATGC TGG GCGTTCGTCGCCGCCAAGCTGCG GTTCTTCCTGTTCGC aapM-2 2991586 - 2992668 + | polar amino acid ABC transport system protein, aapM-2 RPA2631 2993216 - 2994244 + | ABC transporter substrate-binding periplasmic protein RPA2632 2994255 - 2995253 + | ABC transport permease RPA2633 2995253 - 2996065 + | nitrate ABC transporter ATP-binding protein nifB1 2996908 - 2997804 + | putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB nifH3 2997843 - 2998712 + | putative nitrogenase reductase NifH subunit NifD2 2998778 - 3000286 + | nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) RPA2637 3000298 - 3001680 + | nitrogenase iron-molybdenum protein subunit nifK-like protein RPA2638 3001975 - 3003279 + | oxidoreductase TERM 2160 3003310 - 3003326 + T 76 -13.7 -3.24735 | opp_overlap 3003272 3003305, overlap 3003305 3003303 3003293 CGCGGAAGAACCTCT TCGGCCG CGC CGGCCGA TTACGTCTTTGCGTC RPA2639 3003812 - 3003327 - | L-2-amino-thiazoline-4-carboxylic acid hydrolase RPA2640 3004531 - 3003809 - | isochorismatase hydrolase family protein RPA2641 3006129 - 3004528 - | putative ABC transporter oligopeptide-binding protein RPA2642 3006354 - 3007244 + | LysR family transcriptional regulator RPA2643 3008927 - 3007305 - | putative ABC transporter ATP-binding protein RPA2644 3009754 - 3008924 - | putative ABC transporter permease protein RPA2645 3010736 - 3009759 - | putative ABC transporter permease protein RPA2646 3012377 - 3010761 - | putative ABC transporter oligopeptide-binding protein RPA2647 3013713 - 3012547 - | putative hydrolase TERM 2161 3013762 - 3013808 + r 70 -10.2 -3.53811 | gap 3 CCGATGAATTCGAGC GGCGCGC-CGTG-CGACAGCTTG ATGT CGAGC-GTCGTCGGGGGCGCGCC TTTCAGACCGATCGC RPA2648 3014525 - 3013743 - | hypothetical protein TERM 2162 3015509 - 3015525 + G 70 -11.5 -3.36785 | CAGCTGAGTCTTGTG CGCCGCG ACG TGCGGCG TTCGTTCAACTCTCG RPA2649 3015504 - 3015860 + | hypothetical protein RPA2650 3016726 - 3015857 - | DMT family permease TERM 2163 3016819 - 3016863 + H 79 -13.6 -3.53343 | gap 1, opp_overlap 3016813 3016810 3016808, overlap 3016820 3016853 ACAACAGCAGGCTTG GCAACCGCCGCG-CCGCAG AGGCCCGC CTGCGGCCGCTGCGGTTGA TTTCCACCGCCGCTT TERM 2164 3016820 - 3016862 + H 84 -17.1 -2.71791 | gap 1, opp_overlap 3016813 3016810 3016808, overlap 3016819 3016853 CAACAGCAGGCTTGG CAACCGCCGCG-CCGCAG AGGCCCGC CTGCGGCCGCTGCGGTTG ATTTCCACCGCCGCT RPA2651 3016936 - 3017337 + | endoribonuclease, protein synthesis inhibitor RPA2652 3017428 - 3017631 + | hypothetical protein TERM 2165 3017712 - 3017691 - T 100 -15.1 -4.54727 | GCCCCCAAACGAAAA CCGGGCCCC TTTC GGAGCCCGG TTCGGCAATATAGCT pucAa 3017924 - 3017745 - | light harvesting protein B-800-850, alpha chain A (antenna pigment protein, alpha chain A) (LH II-A alpha) pucBa 3018093 - 3017950 - | light harvesting protein B-800-850, beta chain A (antenna pigment protein, beta chain A) (LH II-A beta) RPA2655 3021518 - 3018684 - | glycosyl transferase, family 2 TERM 2166 3019603 - 3019632 + g 79 -11.5 -3.76048 | gap 1, overlap 3019604 GCGGCGCGGCGGATC AGGCA-CATCGTGC CGT GCACGATGATGCCG TTGTATTCGTTGCGC TERM 2167 3019604 - 3019631 + g 73 -15 -2.85147 | gap 1, overlap 3019603 CGGCGCGGCGGATCA GGCA-CATCGTGC CGT GCACGATGATGCC GTTGTATTCGTTGCG RPA2656 3022284 - 3021706 - | hypothetical protein RPA2657 3022547 - 3024181 + | putative beta (1-6) glucans synthase TERM 2168 3024500 - 3024510 + T 81 -2.4 -5.1356 | opp_overlap 3024500, overlap 3024494 CCTGATACGGAGTAA GGCG GAA CGGC TTTTTCTTCATAGCG RPA2658 3025986 - 3024595 - | hypothetical protein TERM 2169 3024891 - 3024901 + g 72 -4.6 -4.46615 | TCAGCCGCAGCTGGG TGGC GTT GCCG TTTTCCTTGATCATG TERM 2170 3025271 - 3025288 + g 75 -2.7 -4.74103 | GGTTTTTCCGCCACC GCCTT GTCGTCCG AAGGC TTTTTCGCTTCCGCC glmU 3026154 - 3027512 + | nucleotidyl transferase glmS 3027638 - 3029464 + | D-fructose-6-phosphate amidotransferase TERM 2171 3029610 - 3029641 + F 74 -11.6 -3.41602 | gap 1 GAACGCCGAAGTGGC GCGATCGAACCTGGC CGG GTC-GGATCGATCGC TTATCCTCAGGTCGG RPA2661 3029723 - 3030526 + | hypothetical protein recG 3032659 - 3030557 - | ATP-dependent DNA helicase TERM 2172 3030904 - 3030959 + g 74 -7.5 -4.18494 | gap 3, overlap 3030902 TCGAGGCTTCGCTGC CG-CGGCCGATCCGGCC--GCGCAGCTG ATG CAACTGCGCCAGGCCGAACCGCTCGGCG TTTTCGATCACCATG TERM 2173 3032771 - 3032787 + H 84 -10.8 -4.19506 | opp_overlap 3032766 CGCTATATCAGGGCC GCCCGG CACGT CCGGGC TTTTGGCGTTGAGGT Mfd 3033100 - 3036618 + | transcription-repair coupling factor RPA2664 3037993 - 3036761 - | hypothetical protein RPA2665 3039577 - 3038042 - | putative acid-CoA ligase RPA2666 3041462 - 3039582 - | extracellular solute-binding protein, family 5 TERM 2174 3041447 - 3041469 + g 77 -5.4 -4.59853 | overlap 3041448 TGAAGCGATGATCTG ATTCGGCGCG TCC CACGCCGGAA TTTTTACCACATTCG TERM 2175 3041879 - 3041834 - g 86 -16.7 -3.53343 | opp_overlap 3041828 AAGGCGGCGCCGAAA GCAGCCCCGGCGCCGGCGC AGCAGCAG GCGCCTGCGCCCGAGCAGC AGCAGGTTCAGTTGA RPA2667 3041681 - 3042427 + | invasion associated locus B TERM 2176 3042449 - 3042479 + T 70 -13.3 -2.95896 | opp_overlap 3042455, overlap 3042455 ACCGCGATCGCGAAA CGCAAAGGGCGCC CCGGT GGCGCCCTTTCTG CTTTCTGCATACTCG TERM 2177 3042473 - 3042455 - T 83 -13.1 -3.84719 | opp_overlap 3042455 3042449 ATCGCGAAACGCAAA GGGCGCC CCGGT GGCGCCC TTTCTGCTTTCTGCA TERM 2178 3042455 - 3042473 + T 89 -13.1 -4.17701 | opp_overlap 3042455, overlap 3042449 ATCGCGAAACGCAAA GGGCGCC CCGGT GGCGCCC TTTCTGCTTTCTGCA RPA2668 3043187 - 3042513 - | hypothetical protein RPA2669 3043561 - 3043229 - | hemimethylated DNA-binding region RPA2670 3043684 - 3044640 + | auxin efflux carrier RPA2671 3045842 - 3044646 - | 2-octaprenyl-6-methoxyphenyl hydroxylase RPA2672 3045976 - 3046710 + | phosphatidylcholine synthase TERM 2179 3046848 - 3046871 + G 71 -14.6 -2.63549 | overlap 3046847 3046846 CGGGCGACCCGCGCC CGCCAGATCG GCCT CGGTCTGGCG CTGTTGTTCCGGCTG RPA2673 3046707 - 3047429 + | hypothetical protein TERM 2180 3047713 - 3047674 - g 71 -12.8 -3.28924 | opp_overlap 3047665 3047679, overlap 3047675 CACCGGCCTGTACAA GGCGCCGTCGCTGCCG TTCGTCGC CGGCAACGAGGGCGCG GGTGAGGTGGTGTCG TERM 2181 3047712 - 3047675 - g 77 -16.3 -2.57211 | opp_overlap 3047665 3047679, overlap 3047674 ACCGGCCTGTACAAG GCGCCGTCGCTGCCG TTCGTCGC CGGCAACGAGGGCGC GGGTGAGGTGGTGTC RPA2674 3047516 - 3048490 + | quinone oxidoreductase RPA2675 3049994 - 3048669 - | hypothetical protein RPA2676 3051308 - 3050394 - | LysR family transcriptional regulator RPA2677 3051410 - 3052366 + | putative substrate-binding protein, subunit of ABC transporter TERM 2182 3052454 - 3052431 - g 74 -15.3 -2.56164 | overlap 3052430 CCCGCAATCACCAAG GCTGCCGCG ACCGTA CGCGGCAGC ACCAGACAGTTCGCC RPA2678 3052374 - 3053258 + | putative permease protein, subunit of ABC transporter RPA2679 3053251 - 3054069 + | putative transport system ATP-binding protein RPA2680 3054071 - 3054922 + | hypothetical protein RPA2681 3055702 - 3054938 - | hypothetical protein TERM 2183 3055034 - 3055058 + g 73 -14.3 -3.18681 | TTTGGTGTCGCCGTG GATGCACACCG TGT CGGTGCGCATC TTGATCACCTTGCCG uahA 3056740 - 3055730 - | allophanate hydrolase subunit 2 dur1 3057465 - 3056737 - | hypothetical protein RPA2684 3057686 - 3058399 + | hypothetical protein RPA2685 3058412 - 3058819 + | hypothetical protein dapA 3058948 - 3059841 + | dihydrodipicolinate synthase mscL 3059852 - 3060331 + | large-conductance mechanosensitive channel TERM 2184 3060352 - 3060310 - f 100 -15.5 -4.57569 | gap 1, overlap 3060311 GGATTTGTTGAAAAA GGGCGCCG-GCCCGTCGCCA TAGG CGGCGACGAGCACCGCGCCG ACAGGAATCGCCACC TERM 2185 3060351 - 3060311 - f 93 -19 -3.3422 | gap 1, overlap 3060310 GATTTGTTGAAAAAG GGCGCCG-GCCCGTCGCCA TAGG CGGCGACGAGCACCGCGCC GACAGGAATCGCCAC smpB 3060369 - 3060842 + | SsrA-binding protein RPA2689 3060865 - 3061443 + | thiol-specific antioxidant related protein RPA2690 3062231 - 3061557 - | Uracil-DNA glycosylase superfamily RPA2691 3062887 - 3062237 - | hypothetical protein TERM 2186 3063021 - 3063031 + H 81 -4 -4.99043 | ACGAAGCATCAGCCG GTAT TCT ATAC TTTTCTTTCTGAAAA rnpO 3063234 - 3063626 + | DNA-directed RNA polymerase subunit omega TERM 2187 3063669 - 3063691 + F 100 -12.7 -5.93252 | opp_overlap 3063669 TGATGCTCTGCAAAA CGGCTCGGA TCGCT TCCGGGCCG TTTTTTGTTTTTGGA TERM 2188 3063691 - 3063669 - f 78 -10.5 -4.08216 | opp_overlap 3063669 TGATGCTCTGCAAAA CGGCTCGGA TCGCT TCCGGGCCG TTTTTTGTTTTTGGA TERM 2189 3063857 - 3063842 - f 76 -10.4 -3.90112 | GCGGGCGCAATTAAA GCTCCG ATGG CGGAGC CATCGCCTCGCTGCA relA 3063892 - 3066174 + | GTP pyrophosphokinase pdxJ 3066324 - 3067088 + | pyridoxal phosphate biosynthetic protein PdxJ acpS 3067085 - 3067525 + | 4'-phosphopantetheinyl transferase lepB2 3067767 - 3068525 + | peptidase S26A, signal peptidase I RPA2697 3068522 - 3069340 + | ribonuclease III TERM 2190 3069358 - 3069376 + G 81 -11.6 -3.92178 | opp_overlap 3069350 3069348 ATGAAGACGCGGCGA CCGCCGCG ACC CGCTGCGG TTTCGTTGCGCTGAT era 3069330 - 3070256 + | GTP-binding protein Era RPA2699 3070253 - 3070654 + | hypothetical protein recO 3070697 - 3071449 + | DNA repair protein RecO RPA2701 3072358 - 3071489 - | hypothetical protein RPA2702 3072441 - 3072953 + | MarR family transcriptional regulator parC 3072963 - 3075224 + | DNA topoisomerase IV subunit A TERM 2191 3075225 - 3075265 + F 71 -8.2 -3.86311 | opp_overlap 3075203 3075204, overlap 3075229 3075229 CGTAGCATCGCATGA TGCTCG-CCCGCCTGCGCGC TAT GT-CGCAGGCGGGCCGTTCG TTTGGCTTTGCGTCT TERM 2192 3075229 - 3075261 + F 85 -14.2 -3.59293 | opp_overlap 3075203 3075204, overlap 3075229 3075225 GCATCGCATGATGCT CG-CCCGCCTGCGCGC TAT GT-CGCAGGCGGGCCG TTCGTTTGGCTTTGC TERM 2193 3075229 - 3075260 + F 75 -14.4 -2.74853 | gap 1, opp_overlap 3075203 3075204, overlap 3075225 3075229 GCATCGCATGATGCT CGCCCGCCTGCGCGC TAT GT-CGCAGGCGGGCC GTTCGTTTGGCTTTG TERM 2194 3075865 - 3075917 + G 72 -5.2 -4.30987 | opp_overlap 3075854, overlap 3075855 3075866 3075869 AATATCGGCGGCGCA CTGTCGCCGCTCGGCGATCCGCCG CTGTT CGTCGGCTTCCTGCGCGGCGTCGA TTTCTTCTGGCCGGT RPA2704 3075310 - 3076740 + | Na+ antiporter RPA2705 3077119 - 3076754 - | hypothetical protein RPA2706 3077204 - 3078577 + | manganese transport protein MntH RPA2707 3079458 - 3078637 - | AraC family transcriptional regulator RPA2708 3079565 - 3081658 + | fusaric acid resistance pump RPA2708a 3081648 - 3081863 + | hypothetical protein RPA2709 3081860 - 3082762 + | FusE-MFP/HlyD family membrane protein TERM 2195 3082765 - 3082788 + T 74 -10.2 -3.76759 | gap 1 GCGGAGGTCGTGATG CGGG-CGGCCG TTT CTGCCGTCCCG TTTGCTCGCCTTGGT RPA2710 3083631 - 3082855 - | arginyl-tRNA-protein transferase RPA2711 3084314 - 3083700 - | hypothetical protein TERM 2196 3084361 - 3084321 - R 100 -26.3 -4.0162 | GCGCGACATTACAAA CCCTCCATTGATCCGCCGG AGA CCGGCGAATCGATGGAGGG TTGAAACAAGCGAGG hemB 3085437 - 3084385 - | delta-aminolevulinic acid dehydratase RPA2713 3085631 - 3086095 + | hypothetical protein RPA2714 3086173 - 3087738 + | acyl-CoA synthetase TERM 2197 3087803 - 3087763 - f 76 -11.1 -3.74693 | opp_overlap 3087790 3087797 CGGCATTTTACGAAA CGCGGTCCGGATAGGGT TGTGAAG ACCTTAACCGGATCGCG GACGGTCCGGCGGAT RPA2715 3088091 - 3088609 + | MarR family transcriptional regulator TERM 2198 3088710 - 3088734 + F 100 -17.2 -4.64861 | CAGACCTGTCGTCCT TCGGCCTCCC CACAA GGGAGGCCGA TTTGTTTTGCGCCGC RPA2716 3088824 - 3089051 + | hypothetical protein RPA2717 3089068 - 3089283 + | hypothetical protein TERM 2199 3089789 - 3089838 + G 75 -9.1 -4.07568 | GGACAACGACCTGAT CCGCCGCTTCGCGATCGAGCAGC TGCC GCTCTTGGAACGCGATCTGGCGG TTTTGGAAGGGCAGG RPA2718 3089301 - 3089864 + | hypothetical protein RPA2719 3089902 - 3090321 + | hypothetical protein RPA2720 3091364 - 3090492 - | putative glutathione S-transferase YghU RPA2721 3091573 - 3091842 + | hypothetical protein RPA2722 3092691 - 3092068 - | MutT domain-containing protein TERM 2200 3092427 - 3092447 + g 85 -6.2 -4.84918 | gap 1 TCCAGCACCCGTCGC TCC-TCTCG CGAA CGAGAAGGA TTTTGTCTTTCTCGA RPA2723 3093480 - 3092917 - | hypothetical protein glyA 3093944 - 3095242 + | serine hydroxymethyltransferase TERM 2201 3095423 - 3095391 - g 76 -15.5 -2.91274 | CCCAGGTGAAGGATA GCCGGCCGACCGAGG ATT CCTCGGTGATCCGGC GTCGGCGGGTGTGCA RPA2725 3095345 - 3095827 + | transcriptional regulator NrdR TERM 2202 3096888 - 3096861 - g 70 -12 -3.35679 | gap 1 GTGGCGCAGCGACAA CGCGATCGGTGCC GAT GGCATCGA-CGCG CTGCACGACCTGCCG ribD 3095824 - 3096993 + | riboflavin biosynthesis protein RibD ribC 3097004 - 3097612 + | riboflavin synthase subunit alpha ribH 3097743 - 3098234 + | riboflavin synthase subunit beta TERM 2203 3098341 - 3098300 - g 70 -10.7 -3.59087 | gap 1, overlap 3098292 AAGATGACGCCGAAA GGCGAGCGCAAGGCGAACCG GCG CGGCGCGGCGCG-GCTCGCC GCTGTGCAGGCGCTG nusB 3098240 - 3098764 + | transcription antitermination protein NusB TERM 2204 3099182 - 3099212 + G 70 -8.8 -3.96624 | GGTCAATCTCTCCGA TCTGGCCGCCAAGG GCG CCGAGCCGGCCGGA TTTCTGCTGACGCTG thiL 3098958 - 3099938 + | thiamine-monophosphate kinase hppA 3100167 - 3102287 + | membrane-bound proton-translocating pyrophosphatase TERM 2205 3102315 - 3102338 + F 100 -17.4 -4.54727 | opp_overlap 3102315 TTGGTCCAAAAGAAA GCCCCGCGGC GCGA GTCGCGGGGC TTTTGCTTTGAGGCC TERM 2206 3102338 - 3102315 - f 100 -15.2 -4.64861 | opp_overlap 3102315 TTGGTCCAAAAGAAA GCCCCGCGGC GCGA GTCGCGGGGC TTTTGCTTTGAGGCC RPA2732 3102449 - 3102691 + | hypothetical protein TERM 2207 3102722 - 3102746 + F 85 -15.7 -3.53012 | opp_overlap 3102715 3102724, overlap 3102725 GCATCGAACGCCATA GAGCCCGCGGC AGC GCTGCGGGTTC TTTGCAGCAAGCGAA TERM 2208 3102725 - 3102743 + F 86 -13.8 -3.90744 | opp_overlap 3102724 3102715, overlap 3102722 TCGAACGCCATAGAG CCCGCGGC AGC GCTGCGGG TTCTTTGCAGCAAGC RPA2733 3103016 - 3103174 + | hypothetical protein RPA2734 3103212 - 3104075 + | epoxide hydrolase-related protein TERM 2209 3104066 - 3104117 + F 79 -11.5 -3.88787 | gap 3, opp_overlap 3104065 3104064 GGCGCGGGACAAAGG GCTGGCCTGAG-GAGGGCGCCATCGC CCT GCG--GGCGCCCGGACGCAGGCCGGC TTTGTGCCGCTGTGG mexC2 3104271 - 3105464 + | putative RND multidrug efflux membrane fusion protein MexC precursor TERM 2210 3106405 - 3106427 + G 73 -9 -3.90744 | opp_overlap 3106405, overlap 3106423 CGGAAGCGGTGAAAG CGCGGATGGC GGA GCTGGCCGCG TTCTTTCCGCCGGGC TERM 2211 3108500 - 3108521 + G 70 -11.6 -3.35996 | opp_overlap 3108499, overlap 3108500 GCTCGGCGGAATGAT CACCGCGA CCGTGC TCGCGGTG TTCTGGGTCCCGGTG mexD2 3105483 - 3108614 + | RND multidrug efflux transporter MexD TERM 2212 3108658 - 3108638 - T 86 -15.4 -3.53811 | GCTATGCGGCGGAAA CCGGCGCG TCCTG CGCGCCGG CAATCGCCTCAGCGG RPA2737 3109152 - 3108667 - | SmpA/OmlA TERM 2213 3109113 - 3109103 - G 70 -2.4 -4.65895 | CGCGGCAGCGAAAAA CGGC TTC GCAG CGCGTTGGCGCGCCC TERM 2214 3109727 - 3109776 + G 81 -14.9 -3.53012 | gap 1 TCGGGCAGGTGATCG CGGC-GCTCGACGCGGTGCCGC CGGCCAA GCTGCGCAGCGGCGAGCTGCCG TTTCCGCAGCCGACC RPA2738 3109261 - 3109797 + | ubiquinol-cytochrome C chaperone RPA2739 3109815 - 3110381 + | hypothetical protein TERM 2215 3110402 - 3110376 - f 100 -16.6 -4.20918 | CGGAAGCCGAAGAAA GGCTGAGCGGAC AGC GTCCGCCCAACC GCCGCGGACGCGGCC TERM 2216 3110523 - 3110540 + F 70 -7.7 -4.07568 | opp_overlap 3110521 TGTCCGGCCAAATCG GTGTGCA GCGC TGCACGC TTTTCACCGCCCCGA TERM 2217 3110549 - 3110561 + F 100 -10.5 -5.47218 | TGCACGCTTTTCACC GCCCC GAC GGGGC TTTTTTTGAGTCCAC plsX 3110622 - 3111683 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 3111680 - 3112657 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2218 3113154 - 3113120 - g 74 -7.6 -4.28762 | opp_overlap 3113142, overlap 3113122 AGAATCTGACGAAAA CACCGCGCAATCCGCC TCC GGCGGCTGACGGGGAG CTAGCCTTTGGACAA himA 3112791 - 3113147 + | integration host factor alpha subunit TERM 2219 3113734 - 3113746 + G 74 -10.5 -3.83026 | CATCGCAGCTTCCGG CCGCG CCC CGCGG TTTGATCTGCCGCCG RPA2743 3113162 - 3113914 + | MerR family regulatory protein TERM 2220 3114317 - 3114327 + F 72 -2.4 -4.71426 | CTCCGACCATTCATC GGCC TTC GGCA TTTTGTTCATGACGG RPA2744 3114466 - 3114693 + | hypothetical protein TERM 2221 3115088 - 3115037 - g 81 -4 -5.04082 | opp_overlap 3115037, overlap 3115038 CAAACAACAACAAAA GCGACAGCGCGAACTCTCCTGCTG TGCA CGGTCGGCGCGGTCGCGCTGACGA TTCAATTGCCGCAAG TERM 2222 3115237 - 3115263 + G 70 -11.4 -3.48593 | overlap 3115241 ACGCCGTGATGCACG GCCGCCTGCGCC GGT GGCGCCGGTGCC TTATGTGACGCCGTC RPA2745 3115010 - 3117304 + | ferric siderophore receptor protein TERM 2223 3117475 - 3117492 + G 75 -6.9 -4.36914 | GACAATGCGACTGCG TGTGCGG AAGG CCGCCCA TTTTCTCGAACGGAC TERM 2224 3117604 - 3117628 + G 74 -12.1 -3.59202 | CGGCTTCCTGCTTGG CATGATCGCGC TCG GCGCGATCGGG TTCTATCTCGGCATC RPA2746 3117464 - 3117901 + | hypothetical protein TERM 2225 3117951 - 3117924 - T 100 -14.2 -4.41348 | opp_overlap 3117930, overlap 3117925 3117930 GGCTTCCCAAACAAA CGAAAACCGCCC CGAA GGGCGGTTTTCC AGCATCGTGGCGAGC TERM 2226 3117950 - 3117925 - T 91 -17.7 -3.24488 | opp_overlap 3117930, overlap 3117924 3117930 GCTTCCCAAACAAAC GAAAACCGCCC CGAA GGGCGGTTTTC CAGCATCGTGGCGAG TERM 2227 3117945 - 3117930 - T 100 -11.8 -4.72863 | opp_overlap 3117930, overlap 3117925 3117924 CCAAACAAACGAAAA CCGCCC CGAA GGGCGG TTTTCCAGCATCGTG TERM 2228 3117930 - 3117945 + T 83 -11.8 -4.10161 | opp_overlap 3117930 3117925 3117924 CCAAACAAACGAAAA CCGCCC CGAA GGGCGG TTTTCCAGCATCGTG RPA2747 3118333 - 3118016 - | hypothetical protein RPA2748 3118557 - 3119525 + | short-chain dehydrogenase RPA2749 3119564 - 3120349 + | hypothetical protein RPA2750 3122105 - 3120549 - | sugar transferase RPA2751 3123391 - 3122216 - | glycosyl transferase, group 1 TERM 2229 3123877 - 3123824 - H 79 -9.4 -4.18018 | gap 2 CGTTCCGATCGAAAA GCCGGCACCGCTGCCGCCGGACGGCG ATAT CGACGTGCGGCTG-ATCGG-GCAGGC ACTCGCCCGCAAGAA TERM 2230 3125084 - 3125029 - g 85 -17.7 -2.53382 | opp_overlap 3125028 3125045 AGTATCGCGAAGCGA CGACGCGCGAGACGAT-CGACCAATCG CCGT CGGATGGCCGTATCATCTCGCGCG-CG ATCGTCTCCAACACG RPA2752 3123858 - 3125993 + | lipopolysaccharide biosynthesis TERM 2231 3126019 - 3126039 + T 85 -15.4 -3.4285 | opp_overlap 3126019 CACATCAAACAGAAA CGCCCGGG CTGGT CCCGGGCG TTGTCAGTTGGGTAA TERM 2232 3126039 - 3126019 - T 100 -15.4 -4.3851 | opp_overlap 3126019 CACATCAAACAGAAA CGCCCGGG CTGGT CCCGGGCG TTGTCAGTTGGGTAA RPA2753 3127266 - 3126073 - | hypothetical protein RPA2754 3127397 - 3128449 + | polysaccharide deacetylase TERM 2233 3128492 - 3128464 - T 100 -22.5 -3.04144 | GCGGGACTCGCAAGA GCGGCCCGAAGAC GGA GTCTCCGGGCCGC GCGTATCAGCAAACT RPA2755 3128997 - 3128515 - | DNA-binding stress protein RPA2756 3129278 - 3130285 + | hypothetical protein TERM 2234 3130313 - 3130349 + T 84 -13.7 -3.7398 | opp_overlap 3130317, overlap 3130313 3130317 TCGTCGCCGAAACAA CAAACGCCGCCACCG TAATCCC CGGTGGCGGCGTTCC TGTTTTAGATTGCAG TERM 2235 3130313 - 3130351 + T 91 -11.9 -4.27316 | gap 2, opp_overlap 3130317, overlap 3130313 3130317 TCGTCGCCGAAACAA CA--AACGCCGCCACCG TAATCCC CGGTGGCGGCGTTCCTG TTTTAGATTGCAGCC TERM 2236 3130317 - 3130345 + T 100 -18.9 -3.55453 | opp_overlap 3130317, overlap 3130313 3130313 CGCCGAAACAACAAA CGCCGCCACCG TAATCCC CGGTGGCGGCG TTCCTGTTTTAGATT TERM 2237 3130345 - 3130317 - T 100 -18.9 -4.56978 | opp_overlap 3130317 3130313 3130313 CGCCGAAACAACAAA CGCCGCCACCG TAATCCC CGGTGGCGGCG TTCCTGTTTTAGATT RPA2757 3130585 - 3130373 - | hypothetical protein RPA2758 3130682 - 3131788 + | cytochrome oxidase assembly RPA2759 3132479 - 3131802 - | TetR family transcriptional regulator TERM 2238 3131881 - 3131893 + g 80 -9.1 -4.25104 | opp_overlap 3131880 3131879 AATTCAGTAGCAATC CGGCT GCG AGCCG TTTTGGTGACGACGC TERM 2239 3132404 - 3132390 - G 80 -9.2 -4.23892 | overlap 3132391 CTGAATCATCGAAAA CCCGGC ACC GCCGGA TTCGCGGATCAAGGC TERM 2240 3132448 - 3132417 - G 76 -14.5 -3.14564 | GGATTCGCGGATCAA GGCGTGCGC-GGCTG TCAC CAGCCCGCGC-CGCC GGGATTCCAGAGTGC RPA2760 3134283 - 3132481 - | benzaldehyde lyase RPA2761 3134350 - 3134721 + | oxidoreductase RPA2762 3135382 - 3134810 - | hypothetical protein RPA2763 3136690 - 3135410 - | O-acetylhomoserine aminocarboxypropyltransferase RPA2764 3137369 - 3136785 - | CoA-binding RPA2765 3138346 - 3137519 - | enoyl-CoA hydratase RPA2766 3138437 - 3138865 + | phenylacetic acid degradation-related protein rplM 3139021 - 3139485 + | 50S ribosomal protein L13 rpsI 3139487 - 3139969 + | 30S ribosomal protein S9 TERM 2241 3140015 - 3139996 - f 100 -16.4 -4.37092 | opp_overlap 3139996 ACCCGGTCGACAAAA GGGCGCCC CGCG GGGCGCCC TTTTTTTGTTGCGCG TERM 2242 3139996 - 3140015 + F 100 -16.4 -5.7946 | opp_overlap 3139996 ACCCGGTCGACAAAA GGGCGCCC CGCG GGGCGCCC TTTTTTTGTTGCGCG RPA2769 3140244 - 3141479 + | putative diguanylate cyclase (GGDEF) TERM 2243 3141468 - 3141487 + F 85 -15 -3.55622 | AGCGAGGTTGGGCAG GCGGTGGC CTGA GCCACCGC TTTCGACCGCTTCAA RPA2770 3141558 - 3141860 + | antibiotic biosynthesis monooxygenase RPA2771 3143010 - 3141844 - | hypothetical protein rlpA2 3143257 - 3144204 + | rare lipoprotein A RPA2773 3145183 - 3144233 - | epoxide hydrolase TERM 2244 3145295 - 3145273 - H 100 -14.1 -4.33151 | CACCACAATCGAAAA CGGCCGCGC CAGTT GCACGGCCG GTGGTCGTAACGCTG RPA2774 3145328 - 3146569 + | Serine-type D-Ala-D-Ala carboxypeptidase RPA2775 3146572 - 3147264 + | thymidylate kinase RPA2776 3147261 - 3148316 + | DNA polymerase III subunit delta' metG 3148397 - 3149941 + | methionyl-tRNA synthetase RPA2778 3149945 - 3150733 + | TatD-related deoxyribonuclease RPA2779 3150759 - 3151562 + | putative hydrolase TERM 2245 3151751 - 3151706 - T 76 -11.1 -3.73534 | gap 1, overlap 3151714 TAACGTCACTAATAA CCTCGAAATTCCGGGTTCGCGC TTC GCGCGC-CCCGGAATGACGAAA ACTAACTACTCCAAG TERM 2246 3151743 - 3151714 - T 85 -14.3 -3.64049 | gap 1, overlap 3151706 CTAATAACCTCGAAA TTCCGGGTTCGCGC TTC GCGCGC-CCCGGAA TGACGAAAACTAACT RPA2780 3153406 - 3151757 - | acyl-CoA synthetase dctQ2 3155344 - 3153461 - | TrapT dctQ-M fusion permease, dicarboxylate transport TERM 2247 3154409 - 3154361 - G 70 -10.7 -3.54424 | overlap 3154366 CTTCATCTCCGGAAA CAGCACCGGCGCGACCGCGGCCA TGT CGGCGGCCTTCGAGCCGGAGATG CCGGACACCAGATAC TERM 2248 3154460 - 3154426 - G 70 -13.4 -3.04269 | CGGACACCAGATACA TCGCGCCGACCAGCAC GTA GTGCAGGCCGCCGCGG ACGTGGCCGAGCAGG dctP2 3156376 - 3155357 - | TRAP dicarboxylate family transporter DctP subunit RPA2783 3157331 - 3156741 - | hypothetical protein RPA2784 3157632 - 3158327 + | nodulin-related protein RPA2785 3159758 - 3158421 - | flavodoxin oxidoreductase TERM 2249 3159584 - 3159569 - G 70 -8.2 -3.90112 | GCGTTTCGAACCAAA CCGGCC GGGC GGCCAG GATCACGCCGACGGA TERM 2250 3159825 - 3159786 - R 75 -3.7 -4.72272 | gap 3, opp_overlap 3159795, overlap 3159787 3159789 3159793 TCGCCGCATCAAAAA GGACGAATAGCGGGCCATCC AGA GGAC-GCCCGCTATT-G-CG AAACTGCTCGAGCGA TERM 2251 3159825 - 3159789 - R 74 -13.2 -3.28472 | opp_overlap 3159795, overlap 3159787 3159786 3159793 CCGCATCAAAAAGGA CG-AATAGCGGGCCATCC AGA GGAC-GCCCGCTATTGCG AAACTGCTCGAGCGA TERM 2252 3159820 - 3159793 - R 76 -12.8 -3.42182 | gap 1, opp_overlap 3159795, overlap 3159787 3159786 3159789 ATCAAAAAGGACGAA TAGCGGGCCATCC AGA GGAC-GCCCGCTA TTGCGAAACTGCTCG RPA2786 3160592 - 3159849 - | hypothetical protein RPA2787 3160874 - 3161932 + | signal transduction histidine kinase RPA2788 3162709 - 3161963 - | methyltransferase TERM 2253 3162889 - 3162877 - H 76 -9.1 -4.09739 | GGAAGTGGGGTAAAA CGTCG CAC CGACG ACCGACCGTCACAGC TERM 2254 3163648 - 3163618 - g 70 -11.8 -3.41051 | gap 1 CTACTGGCACCACAA CGCCGCG-GCGCG TGAGGG CGCGCGCGTGGCG CTGACCATCACCGGC phaA 3163151 - 3166078 + | putative monovalent cation/H+ antiporter subunit A phaC 3166069 - 3166410 + | putative monovalent cation/H+ antiporter subunit C TERM 2255 3167391 - 3167430 + G 77 -14.2 -3.38656 | gap 1, overlap 3167390 3167402 ACGGTCCTGGCGGTC GCGGCCGCTGCTGGCACGG CCG CCGTGACAGCCTCGGC-GC TGTTCTATCTGGTCA phaD 3166407 - 3168041 + | putative monovalent cation/H+ antiporter subunit D phaE 3168038 - 3168526 + | putative monovalent cation/H+ antiporter subunit E phaF 3168523 - 3168804 + | putative monovalent cation/H+ antiporter subunit F phaG 3168843 - 3169172 + | putative pH adaptation potassium efflux system component phaG RPA2795 3169979 - 3169197 - | hypothetical protein glyA2 3171304 - 3170000 - | serine hydroxymethyltransferase RPA2797 3172909 - 3171458 - | transcriptional regulator BenE 3173005 - 3174288 + | benzoate membrane transport protein pdxK 3174285 - 3175151 + | putative pyridoxamine kinase TERM 2256 3175245 - 3175207 - T 71 -9.5 -3.78775 | gap 1, overlap 3175234 CGCTCGATCACTAAA GCCCCGGCGCGACCCACG CGGT CG-AAATCGCGCCGCGAC CATCGAGGCCGATCC RPA2800 3176011 - 3175202 - | hypothetical protein TERM 2257 3175958 - 3175985 + g 75 -12 -3.64703 | gap 1 GGCTTTCGGCTTGAT GGCC-TCGCGCAG CGT CTGCGCCATGGCC TTTGCGTCGCGGAAA RPA2801 3176752 - 3176255 - | triple helix repeat-containing collagen RPA2802 3176999 - 3179062 + | UvrD/REP helicase RPA2803 3179392 - 3179069 - | hypothetical protein TERM 2258 3179450 - 3179464 + r 79 -11.4 -3.9243 | GCCGCGCTGTCTCTG CCTGGC GCG GCCAGG TTATTTGAACGCTTC RPA2804 3180202 - 3179465 - | hypothetical protein nthA 3180266 - 3180907 + | nitrile hydratase alpha subunit nthB 3180904 - 3181560 + | putative nitrile hydratase beta subunit RPA2807 3181560 - 3181982 + | hypothetical protein TERM 2259 3183126 - 3183101 - g 79 -11.9 -3.85864 | gap 1, opp_overlap 3183095 3183106 3183107 CTACGACTATAAGAA GCAGCT-CGGCT GCG AGCCGCAGCCGC TTATGGTTTTGGAGA TERM 2260 3183106 - 3183126 + G 77 -12.5 -3.68359 | opp_overlap 3183101, overlap 3183095 3183107 ACTATAAGAAGCAGC TCGGCTGCG AGC CGCAGCCGC TTATGGTTTTGGAGA TERM 2261 3183107 - 3183125 + G 75 -16 -2.80533 | opp_overlap 3183101, overlap 3183106 3183095 CTATAAGAAGCAGCT CGGCTGCG AGC CGCAGCCG CTTATGGTTTTGGAG RPA2808 3182106 - 3183239 + | hypothetical protein RPA2809 3184504 - 3183212 - | Beta-lactamase TERM 2262 3184321 - 3184282 - G 75 -11.4 -3.6608 | gap 1, overlap 3184271 AGCACTGCAGGTAAA CCGGCCTGCCGTGCTGCTG GAT CAGCACTACGGCAC-CCGG CAGCTTCCCCGCAGC RPA2810 3185299 - 3184586 - | ExsB family transcriptional regulator TERM 2263 3185324 - 3185346 + H 86 -11.9 -4.1899 | opp_overlap 3185289 CTGTAGCACCACGCG CCGCGCAGG CCAAT CCGGCGCGG TTTTCGCTGGGATGG mazG 3185416 - 3186240 + | nucleoside triphosphate pyrophosphohydrolase TERM 2264 3186854 - 3186842 - g 70 -4.1 -4.47328 | AACCTGAGGACAAAA TCTCC GAA GAAGA AATCCATAGCCTGGT RPA2812 3186319 - 3187614 + | HlyC/CorC family transporter RPA2813 3187611 - 3187973 + | hypothetical protein TERM 2265 3188033 - 3187994 - T 100 -22.1 -4.07568 | opp_overlap 3187995 3187997, overlap 3187995 TCGCCGGCCCCAAAA CGGCGACGGCCGCCGCG ATGGGG CGCGGCGGCCGTCGTCT CGTATCCCGTCCCAG TERM 2266 3188032 - 3187995 - T 100 -25.6 -3.04398 | opp_overlap 3187995 3187997, overlap 3187994 CGCCGGCCCCAAAAC GGCGACGGCCGCCGCG ATGGGG CGCGGCGGCCGTCGTC TCGTATCCCGTCCCA TERM 2267 3187995 - 3188032 + T 100 -27.8 -2.63596 | opp_overlap 3187994 3187995, overlap 3187997 CGCCGGCCCCAAAAC GGCGACGGCCGCCGCG ATGGGG CGCGGCGGCCGTCGTC TCGTATCCCGTCCCA TERM 2268 3187997 - 3188030 + T 100 -26.8 -2.85999 | opp_overlap 3187995 3187994, overlap 3187995 CCGGCCCCAAAACGG CGACGGCCGCCGCG ATGGGG CGCGGCGGCCGTCG TCTCGTATCCCGTCC ssb 3188591 - 3188088 - | single-strand DNA-binding protein TERM 2269 3189631 - 3189641 + G 86 -8.2 -4.72272 | overlap 3189619 3189618 CACCCGGTTCCGGAC CGCC ACC GGCG TTTTTAATGACGACG RPA2815 3189020 - 3189886 + | outer membrane protein TERM 2270 3189916 - 3189948 + F 86 -15.6 -3.55444 | overlap 3189917 3189923 GATTTCAGTCACCCT TGCGGAAGGCCGGC CTCGC GCCGGCCTTTTGCG TTTCGGACCTGGGCC TERM 2271 3189917 - 3189947 + F 84 -16.9 -2.73124 | overlap 3189916 3189923 ATTTCAGTCACCCTT GCGGAAGGCCGGC CTCGC GCCGGCCTTTTGC GTTTCGGACCTGGGC TERM 2272 3189923 - 3189941 + F 95 -13.1 -4.35524 | overlap 3189917 3189916 GTCACCCTTGCGGAA GGCCGGC CTCGC GCCGGCC TTTTGCGTTTCGGAC TERM 2273 3191035 - 3191017 - g 89 -2.4 -5.34365 | gap 1, overlap 3191018 CGACAAGAAGAAAAA GGCCGAC AAGAAG GTCG-CC AAGATCCACGACAAG TERM 2274 3192346 - 3192328 - g 70 -10.2 -3.68222 | overlap 3192329 GCGCAAGCTGAACAA CGCCAGCG AGC CGCCGGCA CCGTACGACCGGATC uvrA 3190193 - 3193210 + | excinuclease ABC subunit A RPA2817 3194052 - 3193267 - | hypothetical protein TERM 2275 3194139 - 3194114 - H 73 -8.9 -3.99405 | opp_overlap 3194133 GGAACGTAGCAGAAA GCGTCGCCGGG CGCG CCTAGCGACAC CCGGAGCTAGCTCCG TERM 2276 3194299 - 3194287 - H 71 -4.7 -4.43477 | overlap 3194288 3194289 GTGAGCGAAGCAAAA CCGGG GGC CCCGC ATATCGCTGCGCTCA RPA2818 3194397 - 3194771 + | hypothetical protein TERM 2277 3194812 - 3194827 + T 70 -11.8 -3.14132 | CGGGCCGCAGGAGCC GCCCGC GCAT GCGGGC TTCCTCGACCACGAC RPA2819 3195151 - 3194789 - | hypothetical protein RPA2820 3195492 - 3195154 - | hypothetical protein RPA2821 3195528 - 3196304 + | ion transporter RPA2822 3196342 - 3196896 + | hypothetical protein TERM 2278 3197152 - 3197125 - f 89 -17 -3.12999 | opp_overlap 3197123 3197141 TCACCTGACAGCCAA CGGCACACCGGC TCTC GCCGGCGTACCG GACTTTGAAATTGAG RPA2823 3197176 - 3197466 + | hypothetical protein RPA2824 3197599 - 3198006 + | thioesterase superfamily protein TERM 2279 3198140 - 3198102 - T 83 -12.4 -3.97406 | gap 1, overlap 3198093 3198103 CGAAAACCGCACAAA GGGCGGGGATGGCCGGG ACATAG CCCGGCCAT-CCCGAAC TCATCGCCAATTGAA TERM 2280 3198140 - 3198103 - T 78 -14.8 -2.97721 | overlap 3198093 3198102 GAAAACCGCACAAAG GGCGGGGATGGCCGGG ACATAG CCCGGCCATCCCGAAC TCATCGCCAATTGAA RPA2825 3198698 - 3198306 - | hypothetical protein RPA2826 3199080 - 3199976 + | hypothetical protein TERM 2281 3200004 - 3200036 + F 100 -17.7 -4.4715 | overlap 3200003 GCAAGCTCCCCACCT CGGCCGCCGATCGTT CTC AGAGGTCGGCGGCCG TTTTGTGCATTGCGG TERM 2282 3200654 - 3200686 + F 100 -17.8 -3.8709 | gap 1, overlap 3200658 TGTTTCTGCCTTCTA CGGCCAACGCCCGCC TCCT GGCGGGCGTT-GTCG TTTGTGCGAGGCTTT TERM 2283 3200658 - 3200683 + F 93 -20.5 -3.00946 | overlap 3200654 TCTGCCTTCTACGGC CAACGCCCGCC TCCT GGCGGGCGTTG TCGTTTGTGCGAGGC TERM 2284 3201675 - 3201688 + G 80 -9.5 -4.23723 | overlap 3201686 CAAGTTGAAGCACGG CGCGC AACT GCGCG TTTTCCGTACTATTC TERM 2285 3202140 - 3202122 - g 78 -13.8 -3.61517 | ATCGGTTGCCAAGAA GCAGGCGC TCA GCGCCCGC GCCCTCGCCGACATC gid 3200764 - 3202200 + | tRNA (uracil-5-)-methyltransferase Gid RPA2828 3203102 - 3202230 - | phytoene synthase RPA2829 3203482 - 3203099 - | hypothetical protein TERM 2286 3203592 - 3203643 + r 74 -12.1 -3.47751 | overlap 3203595 GGCACTGCAACGGGT TCACCCTGGCGGGGCCGGCCACC TTAAAC GGCGGCCTGCCCGGCTAAGGTCA TTATCGCTTCTTCGG TERM 2287 3203595 - 3203640 + r 74 -13.8 -2.87654 | overlap 3203592 ACTGCAACGGGTTCA CCCTGGCGGGGCCGGCCACC TTAAAC GGCGGCCTGCCCGGCTAAGG TCATTATCGCTTCTT secF 3204762 - 3203644 - | preprotein translocase subunit SecF secD 3206389 - 3204788 - | preprotein translocase subunit SecD yajC 3206871 - 3206434 - | preprotein translocase, YajC subunit TERM 2288 3207164 - 3207145 - g 74 -12.8 -3.53811 | CGCACCGGCGGCAAA GCGCCGCC CGCC GGCGACGC CTCCCGGCGCATCCC RPA2833 3207035 - 3208051 + | hypothetical protein TERM 2289 3209780 - 3209760 - g 74 -15.5 -2.66964 | overlap 3209757 3209773 TGACTTACGATATCA CGCCGACAT TCA ATGTCGGCG TCGGCGGCCGCTACT RPA2834 3208220 - 3209920 + | hypothetical protein RPA2835 3210767 - 3209967 - | hypothetical protein TERM 2290 3211407 - 3211397 - H 71 -8.2 -3.87104 | overlap 3211398 GGTACAGGACAACAA CGCC GCC GGCG ACCATGCAGCGGCCG RPA2836 3211602 - 3212495 + | hydrolase TERM 2291 3212561 - 3212539 - T 100 -16.3 -5.27335 | opp_overlap 3212539 GCGTCCAAACAAAAA TGCCCGGCC TTTCG GGCCGGGCA TTTCTTCTTCCCCAG TERM 2292 3212539 - 3212561 + T 100 -17 -4.44667 | opp_overlap 3212539 GCGTCCAAACAAAAA TGCCCGGCCT TTC GGGCCGGGCA TTTCTTCTTCCCCAG lppB 3214011 - 3212596 - | peptidase M23B TERM 2293 3213609 - 3213659 + g 73 -14.6 -2.80816 | gap 1, opp_overlap 3213637 CGGCTGCGGGAGCAG CCGGCATCGGCCGGGCCGCAGCG ACAGAG CGCGGC-GCCTGAACGGTGCCGG TCTGATCGATCGGCG pimt2 3214785 - 3214132 - | protein-L-isoaspartate O-methyltransferase TERM 2294 3215386 - 3215348 - g 70 -10.8 -3.54543 | opp_overlap 3215365, overlap 3215324 3215323 3215351 ATCGAGTCGCTGAAA CAGGCCCTCGACGCCACG CTG CGCGGCGCCGCGTAGCTG CCGCGTCACTCCGCG RPA2839 3215009 - 3215383 + | response regulator receiver (CheY-like protein) RPA2840 3215919 - 3215392 - | hypothetical protein TERM 2295 3215605 - 3215571 - G 79 -7 -4.64657 | overlap 3215573 CGAAACGGTGAAAAA CGTCGAACTCTCCGCC TTT GACGGTGAGCTGGATG CCAAGATGGGGCATG TERM 2296 3215957 - 3215945 - R 80 -4.7 -4.85599 | overlap 3215914 3215946 3215947 CGCAGGGTAGAAAAA CGCGC GTA GCGCC ATGCCCACGTGTCCG surE 3216899 - 3216132 - | stationary phase survival protein SurE TERM 2297 3217337 - 3217319 - R 72 -2.3 -4.72029 | gap 1 TGTAATCCAAGAAAA CCGCCGCC TGCT GG-GTCGG AACACCGATCGGCAC TERM 2298 3219242 - 3219268 + r 71 -9.5 -3.7108 | opp_overlap 3219238 3219239, overlap 3219242 AATCAACAAACTGCA G-CTCGCGAGCGC AAC GCG-TCGCGAGAC TTTCCATCTCGGCAT TERM 2299 3219489 - 3219469 - R 70 -10.4 -3.6608 | ACGATTCCAGTTAAA CGTCGCGC GGATA GCACGACG GCCACACGATCAAGT RPA2844 3220202 - 3219531 - | SCP-like extracellular protein serS 3221512 - 3220208 - | seryl-tRNA synthetase RPA2846 3221942 - 3221637 - | hypothetical protein tatC 3222898 - 3222083 - | Sec-independent protein translocase TatC tatB 3223404 - 3222895 - | twin-arginine translocation protein TatB tatA 3223857 - 3223621 - | twin argininte translocase protein A RPA2850 3225302 - 3224004 - | hypothetical protein RPA2851 3226156 - 3225323 - | chromosome segregation and condensation protein ScpA TERM 2300 3225409 - 3225396 - G 72 -4.5 -4.48449 | gap 1, overlap 3225397 TTACGAAAATACAAA GGCGCC AAG GG-GCC CGACTGATGCAGCTC TERM 2301 3226097 - 3226128 + g 83 -15.2 -3.66178 | CACGAGCGCTTCGTC CTGGTCGGCCTG CTGCTCGA CAGGCCGGCCAG TTTCGAATTGCAGAA RPA2852 3227178 - 3226153 - | Beta-N-acetylhexosaminidase TERM 2302 3227138 - 3227089 - G 81 -14.9 -3.54382 | overlap 3227085 CTTGAACAGAATGAA GCCCCAGGGACGAGATTCGCGGA AAAA TCCGCGCTCATCGTCGCTGAGGC TAAGGCCGGCAATAC RPA2853 3228849 - 3227227 - | hypothetical protein argS 3230745 - 3228952 - | arginyl-tRNA synthetase RPA2855 3232011 - 3230797 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 2303 3230845 - 3230826 - G 73 -4.2 -4.65895 | gap 1, overlap 3230827 3230828 GGGTCGAGTCAAAAA GC-CGCTGA TGT TCGGCGAGC GCATAGCGGTCGGTC RPA2856 3232118 - 3232450 + | HesB/YadR/YfhF RPA2857 3232645 - 3233694 + | hypothetical protein RPA2858 3233691 - 3234755 + | hypothetical protein RPA2859 3235519 - 3234782 - | hypothetical protein TERM 2304 3235559 - 3235586 + r 88 -16.3 -3.33696 | overlap 3235560 TTCTGTCAACGCGAA TGGCCGGAGGC AGCATG GCCTCCGGCCG TTACTTAGCAGGACC TERM 2305 3235560 - 3235585 + r 83 -17.6 -2.60075 | overlap 3235559 TCTGTCAACGCGAAT GGCCGGAGGC AGCATG GCCTCCGGCC GTTACTTAGCAGGAC RPA2860 3236602 - 3235643 - | hypothetical protein TERM 2306 3236667 - 3236651 - H 72 -7.3 -4.15788 | overlap 3236653 3236661 AACCCTCGGAACAAA TACAACC AAG GGTTGCA CAACCGTAACGCAGG xthA2 3237166 - 3238077 + | exodeoxyribonuclease III exoR 3239098 - 3238277 - | putative exopolysaccharide regulatory protein exoR TERM 2307 3239119 - 3239146 + r 70 -9.8 -3.64703 | gap 1, overlap 3239120 ATCTCGCGGGTCACC CCCGGTGCGGTCG CAA CGACCG-GCCGGC TTTCCATCCAACACG TERM 2308 3239712 - 3239731 + r 72 -7.8 -4.14511 | opp_overlap 3239712 GCGACACAGCAACAA GAGTGTCC TGGC GGACACCC TTTTCAGGTGCACTT TERM 2309 3239731 - 3239712 - R 74 -10 -3.80018 | opp_overlap 3239712 GCGACACAGCAACAA GAGTGTCC TGGC GGACACCC TTTTCAGGTGCACTT RPA2863 3241182 - 3239761 - | dihydrolipoamide dehydrogenase RPA2864 3242649 - 3241258 - | branched-chain alpha-keto acid dehydrogenase subunit E2 RPA2865 3242958 - 3242662 - | hypothetical protein RPA2866 3244372 - 3242963 - | pyruvate dehydrogenase subunit beta TERM 2310 3243753 - 3243704 - G 78 -15.8 -3.18681 | gap 3, opp_overlap 3243724, overlap 3243705 3243731 GTTGAAGGTCATGAA CTCGACGATCGGCTTCAGC-CCGGC AAA GCCGGCGCCGACGCCGA-CGCCG-G CGAAGCCGTGTTCGG TERM 2311 3243753 - 3243705 - G 73 -16 -2.50994 | opp_overlap 3243724, overlap 3243704 3243731 TTGAAGGTCATGAAC TCGACGATCGGCTTCAGC-CCGGC AAA GCCGGCGCCGACGCCGA-CGCCGG CGAAGCCGTGTTCGG TERM 2312 3243724 - 3243761 + g 73 -13.9 -3.10796 | opp_overlap 3243704 3243705 3243731 CGATCGGCTTCAGCC CGGCAAAGCCGGCGCCG ACGC CGACGCCGGCGAAGCCG TGTTCGGTGATCGGG TERM 2313 3243754 - 3243731 - G 89 -17.4 -3.54424 | opp_overlap 3243724, overlap 3243704 3243705 CTTCAGCCCGGCAAA GCCGGCGCCG ACGC CGACGCCGGC GAAGCCGTGTTCGGT TERM 2314 3244087 - 3244125 + g 70 -10.8 -3.57144 | GCGAGGCCTTGCTCT GTGCGGCCGGGTCGGACG CCT TGTCGGCATCGGCCGCGC TTTCGCCGTCGCCCA RPA2867 3245465 - 3244431 - | pyruvate dehydrogenase E1 alpha subunit TERM 2315 3245369 - 3245359 - G 70 -2.4 -4.66318 | opp_overlap 3245363 AGCATTTCAAGAAAA GCGC CGA GCTC CTGCTCCTTGGTGAA RPA2868 3245935 - 3245618 - | septum formation initiator RPA2869 3246584 - 3246024 - | flavin-dependent oxidoreductase RPA2870 3247866 - 3246724 - | L-carnitine dehydratase/bile acid-inducible protein F RPA2871 3247959 - 3248573 + | RhtB family amino acid efflux protein TERM 2316 3248670 - 3248658 - T 72 -2.6 -4.67607 | overlap 3248660 3248661 GGCTCAACAAACAAA GACC TGGAT GGCC GGGACGAGCCCGGCC RPA2872 3249528 - 3248725 - | hypothetical protein RPA2873 3250746 - 3249613 - | NADH oxidoreductase TERM 2317 3250846 - 3250818 - R 83 -15.3 -3.13432 | opp_overlap 3250813 TTCAAGACGAGGCAA GGGCCGTGACGAT CAC ATCATCGCGGCCC AAGGATGCGTTCAGC eno 3252140 - 3250857 - | phosphopyruvate hydratase TERM 2318 3251334 - 3251358 + g 79 -11.4 -3.78934 | opp_overlap 3251320 ATCGGCGAGGTACTT GGCCTGCTCG GAGCG CGAGCGGGTC TTGTTCTCGCCGCCA RPA2875 3252326 - 3252802 + | 7-cyano-7-deazaguanine reductase mdoG 3253245 - 3254750 + | glucan biosynthesis protein G RPA2877 3254738 - 3256903 + | glucosyltransferase MdoH RPA2878 3258126 - 3256900 - | MDR related permease TERM 2319 3257496 - 3257543 + g 82 -16.9 -3.01712 | TGAAGATAGTTCGAT AGCCGCGGCGTAGCGCCGGCA GATCCA TCTCGGCGCTGCGCGGCGGCA TCTTGGCGCCGCGCG TERM 2320 3257989 - 3257941 - G 75 -11.5 -3.69354 | CTGCACAACCGCAAA GGTGAAGGCCGTAACCGCGGCGA GAC CCGCCGCGGTGGTGATCGTCACC GAGAACTCGTCGGCG kdsA 3258989 - 3258126 - | 2-dehydro-3-deoxyphosphooctonate aldolase RPA2880 3259906 - 3258986 - | hypothetical protein TERM 2321 3259665 - 3259649 - G 73 -6.5 -4.4078 | opp_overlap 3259651 3259652, overlap 3259651 3259653 TGTCCCGAACGAAAA CACACCG TCG CGATGCG GCGGGATCTTGTCGG RPA2881 3260532 - 3260002 - | hypothetical protein RPA2882 3260682 - 3260957 + | hypothetical protein RPA2883 3261849 - 3260992 - | hypothetical protein RPA2884 3261980 - 3262357 + | hypothetical protein TERM 2322 3262591 - 3262563 - g 73 -9.5 -3.93038 | opp_overlap 3262563 3262562 CACGGCAAGATCAAA GCCGCCCAAGC TCTGTCT GTCTGGGCGGC GTTCGTGCTGTTCGA RPA2885 3262467 - 3262613 + | hypothetical protein pyrG 3264258 - 3262627 - | CTP synthetase TERM 2323 3264403 - 3264377 - R 91 -16.6 -3.5882 | CAGACGATTGCTAAA GGGACCTCAGGC CAG GCGTGAGGTCCC GTCAGCGCATATCGG TERM 2324 3264441 - 3264479 + r 77 -14.4 -2.87243 | overlap 3264439 TATTGCGACTGCGGC GGAGTCGGCGCCGCAGGC GCG GCCGGTGCCGCCGGCTGC TGGTTCTGCTGCTGA secG 3264829 - 3264425 - | preprotein translocase subunit SecG cbbJ 3265841 - 3265005 - | triose-phosphate isomerase TERM 2325 3265987 - 3266013 + H 75 -13.6 -3.09516 | GGCGACGCTAGTTTG CCCCCCGCGCTG ACC CAGCGCGGCCGG TTCCCTCCTGACAAA TERM 2326 3267322 - 3267265 - g 72 -14.7 -2.71364 | gap 1 CGATGCGGCCAAGCA GCTCGGCCTCACCGCCGTGACGGTCGAC GCG ATCGACCGCGCCGGCCGCG-GGCCGGAC GGCGCGCCGGTGGCG RPA2889 3266039 - 3267940 + | PpiC-type peptidyl-prolyl cis-trans isomerase trpD 3267977 - 3268993 + | anthranilate phosphoribosyltransferase trpC 3269058 - 3269921 + | indole-3-glycerol-phosphate synthase TERM 2327 3270065 - 3270037 - g 74 -5.2 -4.57073 | overlap 3270038 GACGTGTCGGAAAAA CCGGCCACCG AACGCGTCG CGGTCGCCGA AGGCCGCGTGGTGAT TERM 2328 3270156 - 3270127 - g 89 -10.6 -4.1822 | opp_overlap 3270137 GGCGACGCCAAGAAA GGCGACGTGCTC GGCACT GCGCGCGTCGCC GGGATCATGGCGGCG moaC 3269932 - 3270462 + | molybdenum cofactor biosynthesis protein C TERM 2329 3270907 - 3270926 + G 76 -15 -3.13403 | overlap 3270905 GTTGTCGGAGGGTGA CCGCGTCG CCGC CGACGCGG TGTTGCTGCAGGCCG TERM 2330 3271594 - 3271641 + G 74 -12.6 -3.53444 | gap 1, overlap 3271583 3271579 CGAGACCGGCCTGCT CGCAGCTGCGCCGGATCCGTTCG ATC CGA-TGGATCAGGCGCTGCACCG TTTGGCCGGCGATCA RPA2893 3270500 - 3273058 + | ATPase, E1-E2 type TERM 2331 3273075 - 3273039 - T 75 -13.7 -3.01712 | opp_overlap 3273062, overlap 3273042 CGCTGTGGCGGAAGA TGATGCGGCAACCGG GATAGCA CCGGCCGCCGCATCG CGGGATGCGCTTGGC TERM 2332 3273072 - 3273042 - T 72 -14 -2.73875 | opp_overlap 3273062, overlap 3273039 TGTGGCGGAAGATGA TGCGGCAACCGG GATAGCA CCGGCCGCCGCA TCGCGGGATGCGCTT RPA2894 3273662 - 3273186 - | hypothetical protein TERM 2333 3273367 - 3273334 - G 79 -16.7 -2.87564 | opp_overlap 3273345, overlap 3273337 TCATCTTCGGACAGA TCATGCTGAGCGGCG CGGT CGCCGCTCAGCCGGA TCGAGGCCCCGCCTT TERM 2334 3273364 - 3273337 - G 80 -17 -2.69151 | opp_overlap 3273345, overlap 3273334 TCTTCGGACAGATCA TGCTGAGCGGCG CGGT CGCCGCTCAGCC GGATCGAGGCCCCGC RPA2895 3273901 - 3274401 + | small heat shock protein TERM 2335 3274425 - 3274460 + F 84 -15.3 -3.33696 | CGTTAATCATCCCTC GCCGTGCCTCGGCCG CGAAAC CGTCCGGGGCTCGGC TTAGTTGCAAGCAAG RPA2896 3274570 - 3274818 + | hypothetical protein motB2 3275838 - 3274858 - | chemotaxis protein MotB2 RPA2898 3275975 - 3276601 + | haloacid dehalogenase-like hydrolase RPA2899 3276632 - 3277120 + | hypothetical protein TERM 2336 3277187 - 3277173 - f 71 -8.5 -3.90112 | CTGGGGCGAAGGAAA CCGCG ACGCA CGCGG TATCAGCCCCAAGCC RPA2900 3277268 - 3277681 + | rifampin ADP-ribosyl transferase RPA2901 3278066 - 3277725 - | hypothetical protein moeA 3278266 - 3279477 + | molybdenum cofactor biosynthesis protein A TERM 2337 3280200 - 3280175 - g 77 -11.1 -3.8211 | opp_overlap 3280180 CCTGATCCAGAAGAA CGACGTCGCCG ACAC CGGCGATATCG TGGTGGCGCTGATCG lexA 3279537 - 3280364 + | LexA repressor RPA2904 3282702 - 3280435 - | ComEC/Rec2-related protein TERM 2338 3280767 - 3280710 - G 89 -18.4 -2.86271 | gap 3, overlap 3280707 3280708 CGGTGATGATAAGCA CGGC-GCGGGCGCAGTCGTCCGCGAGCCC ATC GGGC-CGCAG-CGACAGCGCCACCAGCCG TCCGTCCGCCAATGG TERM 2339 3282623 - 3282605 - G 100 -5.9 -5.62219 | overlap 3282621 AACAGATCAAAAAAA GCCGGTC CCCAC GACAGGC CGAAGGGCAGCAACG TERM 2340 3282774 - 3282746 - R 83 -14.6 -3.42346 | gap 1, overlap 3282747 AACAGTGGAGCAGAA CGCGTCCGCCGGC AATC ACCGGCGGA-GCG CAATCAGGATCAGTG TERM 2341 3282775 - 3282747 - R 74 -14.6 -2.64925 | gap 1, overlap 3282746 ACAGTGGAGCAGAAC GCG-TCCGCCGGC AATC ACCGGCGGAGCGC AATCAGGATCAGTGG glnS 3284477 - 3282795 - | glutaminyl-tRNA synthetase TERM 2342 3283580 - 3283539 - G 73 -14.3 -3.14344 | gap 1 GATCCGCTTGACGAA GTCGCGCAGCGCCGCCGGCG GCA CGCCG-CGACGCCGCATGCC CGCGATCGTCGGCAT TERM 2343 3284598 - 3284614 + H 83 -15.1 -3.19192 | CTGCTATACACCCTG CGCGCCG CTC CGGCGCG TTCCCTTCCCTGCAA gltX 3284639 - 3286060 + | glutamyl-tRNA synthetase TERM 2344 3286246 - 3286236 - g 76 -2.4 -4.92757 | CGACCAACAACAAAA CGGC AAC GCTG ACGGTTGGAAACAAG gltA 3286211 - 3287515 + | type II citrate synthase TERM 2345 3287571 - 3287536 - T 91 -17.6 -3.28924 | opp_overlap 3287537 3287538, overlap 3287537 3287541 GACCCGGCTCGATAA TCGAACGGCGAACCGC TCCA GCGGTTCGCCGTTCTG TTTTGGGGCCGCAGC TERM 2346 3287537 - 3287571 + T 100 -20.9 -4.07568 | gap 1, opp_overlap 3287536 3287537 3287541, overlap 3287538 ACCCGGCTCGATAAT C-GAACGGCGAACCGC TCCA GCGGTTCGCCGTTCTG TTTTGGGGCCGCAGC TERM 2347 3287570 - 3287537 - T 91 -21.1 -2.57211 | opp_overlap 3287537 3287538, overlap 3287536 3287541 ACCCGGCTCGATAAT CGAACGGCGAACCGC TCCA GCGGTTCGCCGTTCT GTTTTGGGGCCGCAG TERM 2348 3287538 - 3287569 + T 100 -24.6 -3.63744 | opp_overlap 3287537 3287536 3287541, overlap 3287537 CCCGGCTCGATAATC GAACGGCGAACCGC TCCA GCGGTTCGCCGTTC TGTTTTGGGGCCGCA TERM 2349 3287566 - 3287541 - T 95 -20.5 -3.23274 | opp_overlap 3287538 3287537, overlap 3287537 3287536 GGCTCGATAATCGAA CGGCGAACCGC TCCA GCGGTTCGCCG TTCTGTTTTGGGGCC RPA2908 3288254 - 3287610 - | cytidine/deoxycytidylate deaminase:Tat pathway signal lpxB 3289585 - 3288404 - | lipid-A-disaccharide synthase RPA2910 3290439 - 3289582 - | hypothetical protein lpxA 3291300 - 3290458 - | UDP-N-acetylglucosamine acyltransferase TERM 2350 3290522 - 3290542 + g 78 -13.9 -3.57418 | overlap 3290518 3290523 CACAGCGCGACACGC TGGCCGCGG CCG CCGCGGCCC TTGATTTCGTCGATG TERM 2351 3290523 - 3290541 + g 80 -17.4 -2.73969 | overlap 3290522 3290518 ACAGCGCGACACGCT GGCCGCGG CCG CCGCGGCC CTTGATTTCGTCGAT RPA2912 3291764 - 3291309 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ lpxD 3292846 - 3291764 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RPA2914 3295401 - 3292876 - | putative outer membrane protein TERM 2352 3294091 - 3294103 + g 75 -4.8 -4.65747 | opp_overlap 3294091 ACCCGACACCGAGAA GTCG CCAGT CGAC TTTTCTTCGAGGTTG RPA2915 3296725 - 3295574 - | peptidase M50, putative membrane-associated zinc metallopeptidase dxr 3297994 - 3296771 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2353 3296843 - 3296870 + g 75 -15.6 -2.70932 | gap 1 TTGGTCGAGAGCGAT GGCGTCG-TCGGC GGA GCCGAGCGGCGCC TGGTTGCCGGCACGG TERM 2354 3297310 - 3297336 + g 100 -11.7 -4.37886 | CCTCGAGGCCCTTGT TCATCATCGAC GCCGA GTCGATGGTGA TTTTCTGCCCCATGC TERM 2355 3297925 - 3297971 + g 76 -6.4 -4.56597 | opp_overlap 3297918 3297898 CGATCGAACCGGTGG CGCCGAGCACGCTTACGGTG CGGACGC CGCCATGGGCAGGTTCGGCG TTTTTCAAAGGAACA cdsA 3298847 - 3297999 - | phosphatidate cytidylyltransferase uppS 3299611 - 3298853 - | undecaprenyl diphosphate synthase TERM 2356 3299780 - 3299749 - R 95 -15.9 -4.07568 | GGCCGGGTCCGAAAA CGACGGCGATCCG TTCGGC CGGATCACCGCCG GGACGCGACCGGCGA rrf 3300383 - 3299823 - | ribosome recycling factor TERM 2357 3299969 - 3300021 + g 74 -12.7 -3.51934 | overlap 3299967 3299970 CCAGCTTCTTGATGG TGTCGAGGCCG-TCGCGGCGGACGT GGCGA ACGGC-GACGCGGGCGGCCTCGGCG TATTTGTGCGCGACC TERM 2358 3300441 - 3300420 - R 72 -12.3 -3.33419 | gap 1, overlap 3300418 AGTCTCAAATCAACA TCGCCGCGCG ATG CGCGCG-CGA CCGCCTGTCAGCCCG pyrH 3301165 - 3300449 - | uridylate kinase TERM 2359 3301190 - 3301215 + r 70 -10.3 -3.59979 | opp_overlap 3301188, overlap 3301191 GCTCCCTTGAAGACT GGCTCCCGGCC CGAA GGCCGGGAGGA TTTCGCGTAAACCGC TERM 2360 3301191 - 3301214 + r 72 -13.8 -2.75844 | opp_overlap 3301188, overlap 3301190 CTCCCTTGAAGACTG GCTCCCGGCC CGAA GGCCGGGAGG ATTTCGCGTAAACCG TERM 2361 3301255 - 3301276 + r 75 -14.5 -2.71763 | overlap 3301252 3301249 TGGCCGGAAGCGGCG GCGACTTCG GCGG CGAAGTCGC TGGTCTGCTTCTCGA tsf 3302159 - 3301233 - | elongation factor Ts TERM 2362 3302243 - 3302283 + r 89 -17.5 -3.15544 | opp_overlap 3302250, overlap 3302245 ATCTCAGATTTTGAC GACGGAACGATGCGGCCGG ATT CCGGCCGCATCGCCTCGTA TTACTCCGCCTCGGC TERM 2363 3302245 - 3302281 + r 95 -20.1 -3.14051 | opp_overlap 3302250, overlap 3302243 CTCAGATTTTGACGA CGGAACGATGCGGCCGG ATT CCGGCCGCATCGCCTCG TATTACTCCGCCTCG TERM 2364 3302276 - 3302250 - R 100 -23.8 -3.09635 | opp_overlap 3302245 3302243 ATTTTGACGACGGAA CGATGCGGCCGG ATT CCGGCCGCATCG CCTCGTATTACTCCG rpsB 3303279 - 3302284 - | 30S ribosomal protein S2 RPA2923 3306003 - 3303514 - | hypothetical protein dnaE 3309620 - 3306165 - | DNA polymerase III subunit alpha RPA2925 3310205 - 3310714 + | hypothetical protein RPA2926 3311609 - 3310911 - | lipoprotein ABC transporter ATP-binding protein RPA2927 3312901 - 3311621 - | lipoprotein releasing system, transmembrane protein, LolC/E family proS 3314297 - 3312981 - | prolyl-tRNA synthetase RPA2929 3316053 - 3314473 - | hypothetical protein RPA2930 3316598 - 3316071 - | hypothetical protein TERM 2365 3316552 - 3316574 + g 77 -16.3 -2.74523 | opp_overlap 3316555, overlap 3316548 GGCGCGGCGCCGAAC GCAGCGGCC GTAAG GGCCGCTGC TGCTGTTACCGATCG RPA2931 3317137 - 3316598 - | hypothetical protein TERM 2366 3316948 - 3316964 + g 71 -9.3 -3.82824 | opp_overlap 3316947, overlap 3316925 3316921 TGCCGGACACCAGAC GGTCGGC GCT GCCGCCC TTGTTCTCGATGGTG RPA2932 3317679 - 3317263 - | hypothetical protein TERM 2367 3317993 - 3318011 + r 100 -16 -5.61881 | TCGACAAGTTTTTCA GCAGGGCG CCG CGCCCTGC TTTTTCTTTTTAAGC RPA2933 3318579 - 3318298 - | hypothetical protein RPA2934 3318987 - 3318583 - | glyoxalase/bleomycin resistance protein/dioxygenase RPA2935 3320699 - 3319029 - | Beta-lactamase-like birA 3321505 - 3320699 - | biotin--acetyl-CoA-carboxylase ligase TERM 2368 3321472 - 3321450 - G 91 -17 -3.75153 | opp_overlap 3321444 3321443 CCCGTGGAATCGAAA GCGGCGAGCT TAT AGCCCGCCGC TGCCGCCTTTGATCC nuoN1 3322945 - 3321506 - | NADH dehydrogenase subunit N TERM 2369 3321843 - 3321833 - G 70 -8.2 -3.95324 | overlap 3321820 3321817 3321834 CATGGCGAAGAAGAA CGCC AGC GGCG GATTGGTGCGCGACA TERM 2370 3322971 - 3323010 + r 75 -12 -3.63569 | overlap 3322967 3322974 CCTTGCCGGTCACGG CAGCGCCGCTGCCTTCAC GGCA GTCACGGCGGCGGCGTAG TTGTTGACGAGTTGC TERM 2371 3322974 - 3323007 + r 77 -14.5 -2.93252 | overlap 3322967 3322971 TGCCGGTCACGGCAG CGCCGCTGCCTTCAC GGCA GTCACGGCGGCGGCG TAGTTGTTGACGAGT nuoM1 3324482 - 3322965 - | NADH dehydrogenase subunit M nuoL1 3326576 - 3324483 - | NADH dehydrogenase subunit L nuoK1 3326947 - 3326636 - | NADH dehydrogenase subunit K TERM 2372 3326741 - 3326693 - G 70 -11.1 -3.61398 | gap 3 GCGGTTGCGGAAGAA CACCACCAGCA-CCGC-CAGGCCG ATCG CGGCCTCCGCGGCTGC-GACGGTG AGCACCAGCAGCGCG nuoJ1 3327582 - 3326944 - | NADH dehydrogenase subunit J nuoI1 3328080 - 3327592 - | NADH dehydrogenase subunit I TERM 2373 3327928 - 3327961 + g 74 -10.1 -3.78934 | opp_overlap 3327920 GGGATAACGGCGCAG CGCGTGCTCGCCGCG GAAC CGCGGTGAGATCGGG TTCTTCTCGAAAGGA nuoH1 3329113 - 3328088 - | NADH dehydrogenase subunit H nuoG1 3331207 - 3329123 - | NADH dehydrogenase subunit G TERM 2374 3330229 - 3330254 + g 71 -14.7 -2.63073 | overlap 3330228 3330245 ACATCTCTTCGACCG CGGCGAGATCG CCGG CGATCGCGCCG ATCTTCTTGGCCGAG nuoF1 3332529 - 3331204 - | NADH dehydrogenase I subunit F RPA2946 3332763 - 3332548 - | hypothetical protein TERM 2375 3332741 - 3332769 + g 87 -14.5 -3.8211 | TCCGCGACGGCGCGC CCCGCCGGGGCGA TCG TCGTCATGGCGGG TTCTTCTCGGTGGCG nuoE1 3333509 - 3332760 - | NADH dehydrogenase subunit E fkbM 3334483 - 3333512 - | FkbM family methyltransferase nuoD 3335688 - 3334480 - | NADH dehydrogenase subunit D TERM 2376 3334758 - 3334784 + g 75 -14.4 -3.29273 | overlap 3334756 CTTCCATCGAGCGCT TCATCTCGCCGC GGC GCGGCGGGAAGA TCTTGTGGTCGTCGA nuoC 3336354 - 3335740 - | NADH dehydrogenase subunit C nuoB1 3336964 - 3336368 - | NADH dehydrogenase subunit B nuoA1 3337341 - 3336976 - | NADH dehydrogenase subunit A TERM 2377 3337894 - 3337912 + H 100 -16 -4.20084 | opp_overlap 3337887 ACAGAGGATTGAGAG GGCCGCCA CTT TGGCGGCC TTTTGCATAGCTGAT hupA 3338656 - 3338967 + | DNA-binding protein HU-alpha (NS2) (HU-2) TERM 2378 3339099 - 3339129 + F 100 -14.7 -4.85782 | gap 1, opp_overlap 3339099 GTTCAGATTGAAGAA CGGCAGGCTTGGGC ATCC GCCCC-GCCTGCCG TTTCTTTTTGGCAAC TERM 2379 3339129 - 3339099 - f 88 -14.7 -3.70773 | gap 1, opp_overlap 3339099 GTTCAGATTGAAGAA CGGCAGGCTTGGGC ATCC GCCCC-GCCTGCCG TTTCTTTTTGGCAAC pepT 3339219 - 3340517 + | peptidase T TERM 2380 3340562 - 3340573 + F 76 -5.8 -4.55689 | opp_overlap 3340550 3340523, overlap 3340548 GCACGATGGCGCGCA TCGC CGCC GCGA TTTTGTCTCAATCGT mex 3340667 - 3341911 + | RND efflux membrane fusion protein precursor TERM 2381 3343064 - 3343088 + G 78 -14.3 -3.55071 | GGTCCCCGCCACCAC CGTGCCGGTGA CGA TCATCGGCGCG TTTGCGGCGATGTCG TERM 2382 3344948 - 3345000 + G 73 -14 -3.13522 | gap 1, overlap 3344947 3344950 3344957 CGGCGCCCGCGTGTC GC-TCGGCATCGCCGTGGTGGCCGG CATG CTGGCCTCCACGGGGCTGGCGGTGC TGTTCGTGCCGGCGT TERM 2383 3344950 - 3344997 + G 75 -15.4 -2.77523 | overlap 3344948 3344947 3344957 GCGCCCGCGTGTCGC TCGGCATCGCCGTGGTGGCCGG CATG CTGGCCTCCACGGGGCTGGCGG TGCTGTTCGTGCCGG mexF 3341940 - 3345080 + | putative RND multidrug efflux transporter MexF TERM 2384 3347530 - 3347570 + G 71 -12.6 -3.25823 | gap 1 CCGGCACGATCGCCG GCTGCGAAGC-GCTGCTGC GCTG GCAGCATCCGGTTCGCGGC TTCGTCTCGCCAGCC TERM 2385 3348215 - 3348196 - g 91 -16.4 -3.84719 | opp_overlap 3348190 3348209 ACGCCGAAACGCAAA CGGCGCCC CGAA GGGCGCCG GCGAGTGTGTGACGT RPA2957 3345579 - 3348227 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) RPA2958 3349376 - 3348336 - | putative DNA-binding protein TERM 2386 3348986 - 3349008 + g 72 -13.4 -3.18735 | opp_overlap 3348970 3348960 CCGGCTCCTTAAGCC GGGCGTCGTC AAG GACGAAGCCC TTGGTCAGGTATTCC TERM 2387 3349547 - 3349517 - R 82 -11.1 -4.08767 | gap 1, opp_overlap 3349517 3349513 3349522, overlap 3349523 CTCAGCTCCCCAAAA CGCAAACGGCGCCC TTTC GGGCGCCGCT-GAG TTGGTTGTGTGTCGC TERM 2388 3349542 - 3349523 - R 95 -16.4 -3.92659 | opp_overlap 3349522 3349517 3349513, overlap 3349517 TCCCCAAAACGCAAA CGGCGCCC TTTC GGGCGCCG CTGAGTTGGTTGTGT lon 3352003 - 3349571 - | ATP-dependent protease La TERM 2389 3349613 - 3349634 + g 78 -13.7 -3.61589 | overlap 3349609 TTCGTCGGCTTCGGC GCTGTCCGG GGTG CCGGGCAGC TTGGTTTCCTCTTCC TERM 2390 3349796 - 3349823 + g 77 -13.4 -3.50853 | gap 1 GATCAGCACCGTCTT GATGC-CGCCGCG GGC CGCGGCGAGCAGC TTCTCCTTGAGGCCG clpX 3353587 - 3352313 - | ATP-dependent protease ATP-binding subunit clpP 3354618 - 3353980 - | endopeptidase Clp TERM 2391 3354679 - 3354669 - R 100 -8.2 -5.28176 | overlap 3354670 GGGAGCGACAAAAAA CGGC TCC GCCG CAGGCGTTCGCCCCG TERM 2392 3354905 - 3354877 - R 100 -22.5 -4.09685 | opp_overlap 3354871 3354867 3354866 3354901 CCTGACGGCGCAAAA CGGCCGCCGTGAC GGT ATCACGGCGGCCG CAGCGATGATTCTCA tig 3356290 - 3354932 - | trigger factor TERM 2393 3355580 - 3355598 + g 75 -16 -2.70932 | CTCGGCCGGCTTACC CGCCAGCG TCT CGCTGGCG TAGTTGGCCGGGAAC RPA2963 3357154 - 3356681 - | hypothetical protein TERM 2394 3357508 - 3357476 - g 70 -13.3 -3.03243 | opp_overlap 3357477 3357502 AGCCACTGGTGAAGA TGCAGTCGGTGCCGC CCA GCGGCAGCGACAGCT TCCTGCTGACTTTGC TERM 2395 3357477 - 3357507 + G 86 -16.8 -3.23984 | opp_overlap 3357476, overlap 3357502 GCCACTGGTGAAGAT GCAGTCGGTGCCGC CCA GCGGCAGCGACAGC TTCCTGCTGACTTTG TERM 2396 3358126 - 3358149 + G 73 -13.8 -3.18264 | opp_overlap 3358105, overlap 3358127 3358129 CTCGGCGGCGCGCTC CGCGCCGAGC TGCT GCTCGGCGCC TTGGTCAATGCGCAG TERM 2397 3358127 - 3358148 + G 79 -17.3 -2.50816 | opp_overlap 3358105, overlap 3358126 3358129 TCGGCGGCGCGCTCC GCGCCGAGC TGCT GCTCGGCGC CTTGGTCAATGCGCA RPA2964 3357277 - 3358482 + | multicopper oxidase, type 1 yjeF 3360030 - 3358531 - | hypothetical protein TERM 2398 3359237 - 3359285 + g 78 -14.4 -3.53811 | GCCACCGTCACGAGG CCGGCGCCGGCGCGG-AGCGCGCC GCG GGCGGCCAGCCGCGCCGCC-CCGG TTTGCGACAGCTCGC TERM 2399 3359550 - 3359566 + g 76 -15.1 -3.16742 | TTGCTGCGCCCATCA CGGCGCC GGT GGCGCCG TTGATACCGCTTGGC glnB 3360442 - 3360780 + | nitrogen regulatory protein P-II TERM 2400 3360818 - 3360838 + F 95 -18.3 -3.53012 | CCTGATCGCATCACC TGGCGGCCG ATC CGGCCGCCA TTTCACGACGACCCG TERM 2401 3361227 - 3361268 + G 81 -12.1 -3.82084 | overlap 3361243 GCCCAGGTCAAGGCG CTCGGCATCGGTGACAGCG TGTT CGTCGGCCCCGAAGCCGAG TTCTTCGTGTTCGAC glnA 3360870 - 3362279 + | glutamine synthetase, type I TERM 2402 3362301 - 3362332 + F 100 -15.2 -4.65895 | opp_overlap 3362307, overlap 3362307 CGGCGACACCATTCA GGGAAAGGCGCTCC TCGC GGGGCGCCTTTTTC TTTTTGGATCGAACG TERM 2403 3362307 - 3362326 + F 100 -12.8 -5.63236 | opp_overlap 3362307, overlap 3362301 CACCATTCAGGGAAA GGCGCTCC TCGC GGGGCGCC TTTTTCTTTTTGGAT TERM 2404 3362326 - 3362307 - f 70 -10.6 -3.67296 | opp_overlap 3362307 3362301 CACCATTCAGGGAAA GGCGCTCC TCGC GGGGCGCC TTTTTCTTTTTGGAT RPA2968 3362578 - 3363327 + | TetR family transcriptional regulator TERM 2405 3363818 - 3363803 - g 70 -6.1 -4.20516 | overlap 3363813 GCTGGACCGAAGAAA CCGAG AAGACG CTCGG CCCGAAGCTGACTCA RPA2969 3363340 - 3363951 + | hypothetical protein bioA 3365371 - 3364094 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 3366006 - 3365368 - | dithiobiotin synthetase bioF 3367133 - 3366003 - | 8-amino-7-oxononanoate synthase TERM 2406 3366829 - 3366805 - G 71 -14.3 -2.84634 | opp_overlap 3366825 TCGTACAGTACGAGA TCGCCACGCTG CGG CAGCGTCGCGA AGATCGCGTGATTGG RPA2973 3367837 - 3367274 - | hypothetical protein TERM 2407 3367490 - 3367476 - G 70 -8.5 -4.00042 | opp_overlap 3367488 3367489 TCGTCGACGAAATAA CCGCG GTCGT CGCGG CGCATGCGCCATTTG RPA2974 3369356 - 3367926 - | putative 6-aminohexanoate-cyclic-dimer hydrolase TERM 2408 3369058 - 3369017 - G 100 -13.5 -4.56597 | overlap 3369018 3369039 3369040 CGCTCTTGCCAAAAA TCGTCACGCCGGCGGCGAG AAAC CGCCCCGCCAGCGTGCCGG TGTGGGGCGCAACGA TERM 2409 3369057 - 3369018 - G 86 -17 -3.33744 | overlap 3369017 3369039 3369040 GCTCTTGCCAAAAAT CGTCACGCCGGCGGCGAG AAAC CGCCCCGCCAGCGTGCCG GTGTGGGGCGCAACG serA1 3370545 - 3369556 - | putative phosphoglycerate dehydrogenase TERM 2410 3370007 - 3369963 - G 77 -12.7 -3.63627 | opp_overlap 3369918 CGTCGAGATCGGAAA CCTGCTTGCAGCCGGCCGC TTCGATC GCGGCCGCCGGCACGTAGG GATCGTACACCAGGA TERM 2411 3370577 - 3370602 + r 95 -2.4 -5.71712 | overlap 3370575 CTTGTTCGTTGTCCG CGCCGCTCGT GAGATG GCGGGCGATG TTTTTTTGTATCAGG RPA2976 3371553 - 3370654 - | DMT family permease TERM 2412 3371685 - 3371726 + H 83 -7 -4.93696 | opp_overlap 3371678 3371677 3371692, overlap 3371693 AAAAATACCTGCCCT GTGAACAGCGGGCGCAGG CGCGAT CCAGCGCCCGCCGCCGAC TTTTTCGTCTTTGGA TERM 2413 3371719 - 3371692 - H 81 -15.5 -3.01712 | opp_overlap 3371685 3371693, overlap 3371677 CCTGCCCTGTGAACA GCGGGCGCAGG CGCGAT CCAGCGCCCGC CGCCGACTTTTTCGT TERM 2414 3373256 - 3373240 - g 71 -9.3 -3.79906 | CGACCCGGAGAAGAA CCCGGCG CTG CGCCGCG AGGTCAAGCTGGCGC TERM 2415 3375842 - 3375796 - g 85 -10.1 -4.18018 | GTCGCCGACCGAAAA GCTGGAAGCGCTGCAGTGG-AGC AAA GCCACCACCGCCGCGA-CCCAGC CCGCCCCGAGCAAAG nrd 3372218 - 3375991 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2416 3376050 - 3376080 + F 71 -11.1 -3.53091 | opp_overlap 3376051 3376052 3376055, overlap 3376053 3376055 GAGATAATCAGGACA ATGGAGGGGAGGC ATCGC GCCTCCCCTCTGA TTTAGAACACAAAAT TERM 2417 3376079 - 3376051 - f 71 -10.9 -3.49086 | opp_overlap 3376050 3376053 3376055, overlap 3376052 3376055 AGATAATCAGGACAA TGGAGGGGAGGCA TCG CGCCTCCCCTCTG ATTTAGAACACAAAA TERM 2418 3376078 - 3376052 - f 75 -14.4 -2.68729 | opp_overlap 3376050 3376053 3376055, overlap 3376051 3376055 GATAATCAGGACAAT GGAGGGGAGGCA TCG CGCCTCCCCTCT GATTTAGAACACAAA TERM 2419 3376053 - 3376077 + F 87 -17.2 -2.90496 | opp_overlap 3376052 3376051 3376055, overlap 3376050 3376055 ATAATCAGGACAATG GAGGGGAGGC ATCGC GCCTCCCCTC TGATTTAGAACACAA TERM 2420 3376075 - 3376055 - f 74 -14.7 -2.62292 | opp_overlap 3376053 3376050 3376055, overlap 3376052 3376051 AATCAGGACAATGGA GGGGAGGCA TCG CGCCTCCCC TCTGATTTAGAACAC TERM 2421 3376055 - 3376075 + F 75 -14 -3.00525 | opp_overlap 3376055 3376052 3376051, overlap 3376053 3376050 AATCAGGACAATGGA GGGGAGGC ATCGC GCCTCCCC TCTGATTTAGAACAC RPA2978 3376115 - 3377209 + | hypothetical protein RPA2979 3377373 - 3377621 + | hypothetical protein RPA2980 3378324 - 3377728 - | integrase RPA2981 3378647 - 3378321 - | P2 ISBm2 RPA2982 3378907 - 3378641 - | hypothetical protein TERM 2422 3379973 - 3379938 - g 83 -9.7 -4.35524 | gap 1, overlap 3379931 TCGGCAAAGGCAAAA GCGAGCCGCTGAGC GTCGCGCTG GC-CAGCGGCACGC AATCCGTCACGTTGA RPA2983 3379718 - 3380197 + | hypothetical protein RPA2984 3381445 - 3380294 - | putative diguanylate cyclase (GGDEF) TERM 2423 3380562 - 3380577 + g 72 -8.2 -4.08216 | opp_overlap 3380562, overlap 3380563 CAGCGGCCGACCAGA TCGCCC TTGC GGGCGG TTTTCCGCAGGATCG TERM 2424 3381152 - 3381134 - G 70 -6.6 -4.18494 | overlap 3381122 3381121 3381119 CAGCGCCAGCGAAAA CGCGGCGA AGA TCGCGACG TCGATCCACAATCCA TERM 2425 3382107 - 3382133 + G 78 -13.7 -3.53012 | opp_overlap 3382100 3382123, overlap 3382123 CGCACCAAGGGCGAG GCCGAGCGCGA CATCA TCGCGCTGGGC TTTCCGCGCACCGCC RPA2985 3381693 - 3382379 + | hypothetical protein RPA2986 3383399 - 3383055 - | 5-carboxymethyl-2-hydroxymuconate delta isomerase RPA2987 3383593 - 3384438 + | hypothetical protein TERM 2426 3385061 - 3385076 + G 75 -11.8 -3.68222 | CGAGCCGGACGGCCT GCCGCC GGAC GGCGGC TTCTTCCGGTTCGAA yrkN 3384525 - 3385103 + | GCN5-related N-acetyltransferase RPA2989 3385144 - 3386145 + | putative quinone oxidoreductase RPA2990 3386771 - 3386280 - | hypothetical protein TERM 2427 3386850 - 3386889 + r 75 -12.1 -3.61398 | gap 1 TGTGAGGCGATCTGC CGCGGTCAAGGCCGCTCC TTGAC GGAGCGGCCTCCGC-GCG TTGTTACCAGCCGCG RPA2991 3387189 - 3386893 - | hypothetical protein TERM 2428 3387509 - 3387539 + r 74 -12.4 -3.53012 | opp_overlap 3387497, overlap 3387533 CGATCACTTCGGCGC GGGCGACGAGCCGA CTG TCGGCGCGCCGGCC TTTGCCGGGCCGAGC RPA2992 3388180 - 3387497 - | hypothetical protein RPA2993 3388863 - 3388210 - | hypothetical protein RPA2994 3389873 - 3388995 - | LysR family transcriptional regulator nuoL3 3389982 - 3391553 + | NADH-ubiquinone/plastoquinone (complex I) RPA2996 3391575 - 3394001 + | hypothetical protein RPA2997 3394158 - 3394445 + | hypothetical protein dapA1 3394449 - 3395372 + | putative dihydrodipicolinate synthase ptsN2 3395850 - 3395404 - | putative nitrogen regulatory IIA protein kdpE 3396557 - 3395874 - | two-component osmotic transcriptional regulator KdpE kdpD 3399286 - 3396563 - | two component osmosensitive K+channel and sensor histidine kinase, KdpD TERM 2429 3397004 - 3397046 + g 70 -10.6 -3.53012 | gap 1 CGATGTCGCGCGCCG CAGCGTGGCGC-CGACC AGTTCACCGA GATCGTGCGCCGCGCTG TTTGGCACGACGGCA TERM 2430 3397916 - 3397880 - G 90 -2.2 -5.47159 | overlap 3397882 3397891 CGGAAGAAAGAAAAA GTTG-TAGCACAGCGACG CGA CGACGCTG-GCGAGCAGC GAGGGCCCCAGCCCG kdpC 3399937 - 3399332 - | potassium-transporting ATPase, C subunit kdpB 3402079 - 3399950 - | potassium-transporting ATPase subunit B kdpA 3403792 - 3402089 - | potassium-transporting ATPase subunit A RPA3005 3404124 - 3404417 + | hypothetical protein RPA3006 3404723 - 3405283 + | hypothetical protein RPA3007 3405291 - 3406031 + | hypothetical protein kup2 3407925 - 3406021 - | potassium uptake protein Kup TERM 2431 3408472 - 3408451 - g 77 -5.7 -4.63527 | overlap 3408452 CGACGATTCGAAAAA GGTCTGGCC CACG GGCCTGACG ATTGCGGAATCCGAG pucBc 3408431 - 3408586 + | light harvesting protein B-800-850, beta chain C (antenna pigment protein, beta chain C) (LH II-C beta) RPA3011 3409959 - 3409321 - | hypothetical protein TERM 2432 3409402 - 3409378 - G 72 -8.5 -4.07687 | opp_overlap 3409384 AGGCGTGCCGGAAAA CGAACTGTAGG CGT CCTTCTGTTCG ATCAACAAAGGCGTT TERM 2433 3410098 - 3410045 - R 70 -11.8 -3.2218 | gap 2, opp_overlap 3410095, overlap 3410037 3410035 3410046 3410095 3410097 GGGAAGAGCCAGGAA GCTGGCTGACCGCGGTAGCCGGGATC CTCG GACCCCAGCCACCGCAG-CAAC-AGT CAGAGACTGTCTTAG TERM 2434 3410097 - 3410046 - R 76 -15.3 -2.52987 | gap 2, opp_overlap 3410095, overlap 3410037 3410035 3410045 3410095 GGAAGAGCCAGGAAG CTGGCTGACCGCGGTAGCCGGGATC CTCG GACCCCAGCCACCGCAG-CAAC-AG TCAGAGACTGTCTTA pucAd 3410289 - 3410110 - | light harvesting protein B-800-850, alpha chain D (antenna pigment protein, alpha chain D) (LH II-D alpha) pucBd 3410457 - 3410302 - | light harvesting protein B-800-850, beta chain D (antenna pigment protein, beta chain D) (LH II-D beta) TERM 2435 3410796 - 3410813 + H 74 -5.5 -4.42386 | overlap 3410799 TGTGCCAACCGACCA CGACACC GCCA GGTGTAG TTTTCTCCGTGAAGA RPA3014 3410877 - 3411584 + | two-component LuxR family transcriptional regulator TERM 2436 3411778 - 3411768 - f 71 -8.2 -3.86822 | overlap 3411769 GAAGGGCGGCACAAA GCGC TGC GCGC CCAGCAATCGACACT TERM 2437 3411986 - 3412004 + G 78 -16 -3.08813 | CGATCGGCGCCCTGA TCGGCCGC TCT GCGGCCGA TGTCTTCGACTCGGA phyB1 3411808 - 3414084 + | bacteriophytochrome PhyB phyB2 3414088 - 3416415 + | bacteriophytochrome PhyB rphyB 3416416 - 3416880 + | response regulator receiver (CheY-like protein) RPA3018 3416877 - 3418013 + | response regulator receiver sensor signal transduction histidine kinase TERM 2438 3418046 - 3418020 - T 80 -14.4 -3.18274 | opp_overlap 3418021 CCGAGCTGAAGCGAA GCGGCGCCGAGT AAG ACTCGACGCCGT TTCGGCCGCTCATCC TERM 2439 3418021 - 3418045 + T 86 -15.7 -3.54741 | opp_overlap 3418020 CGAGCTGAAGCGAAG CGGCGCCGAGT AAG ACTCGACGCCG TTTCGGCCGCTCATC TERM 2440 3421476 - 3421444 - T 71 -13.3 -2.98545 | opp_overlap 3421443, overlap 3421442 3421441 3421438 TGTTGAGAACAATGA GGGGCAGCCCCGCCT TAG AGGCGGAGCCGCGAC GATTAGTTCTGCGCG TERM 2441 3421500 - 3421536 + T 83 -15.1 -3.21099 | CTGCGCGACCGTCTT GCTCGAGGCGGCGGC CTCCATC GCCACCGTCTCGGGC TTGATGGTGACGCCG mexE 3422678 - 3421479 - | RND multidrug efflux membrane fusion protein MexE precursor TERM 2442 3421940 - 3421950 + g 72 -6.8 -4.25104 | GAATCCGTTCGATCG CACC CGG GGTG TTTTCGTCCGCGAGG TERM 2443 3422558 - 3422534 - G 73 -11.3 -3.65351 | opp_overlap 3422533 3422538 3422540, overlap 3422535 CGAGCGCCACCGAAA CCGGCACCGCC GGC GGAGGTGCCGC GGTGGTTTCGGCAAG TERM 2444 3422557 - 3422535 - G 72 -14.8 -2.78996 | opp_overlap 3422533 3422538 3422540, overlap 3422534 GAGCGCCACCGAAAC CGGCACCGCC GGC GGAGGTGCCG CGGTGGTTTCGGCAA RPA3021 3422874 - 3423461 + | TetR family transcriptional regulator RPA3022 3423592 - 3424758 + | putative diguanylate cyclase (GGDEF) RPA3023 3424892 - 3425878 + | aldo/keto reductase TERM 2445 3425909 - 3425939 + T 84 -15.4 -3.28712 | overlap 3425904 GTGGTATTAGGTCTT CGGCTTTGCCGCCG GCT TGTCGGCGAAGCCG TTGTAGCAGGCGAGC RPA3024 3426310 - 3425900 - | hypothetical protein RPA3025 3426447 - 3426773 + | hypothetical protein RPA3026 3426819 - 3427469 + | abortive infection protein kup1 3429341 - 3427479 - | K+ potassium transporter TERM 2446 3427971 - 3427914 - G 83 -13.3 -3.85698 | gap 1, opp_overlap 3427970, overlap 3427917 3427964 CGCGGCGGTGAGAAA CACCGCGGTGCCACGGGC-CCGCGACAC GTT GGGTCCCAGTGCCCGCAACACCACGTCG AGCGGCACCGCCTGC TERM 2447 3427968 - 3427917 - G 75 -15.8 -2.70946 | gap 1, overlap 3427914 3427964 GGCGGTGAGAAACAC CGCGGTGCCACGGGC-CCGCGACAC GTT GGGTCCCAGTGCCCGCAACACCACG TCGAGCGGCACCGCC TERM 2448 3428214 - 3428196 - G 72 -13.2 -3.14881 | overlap 3428184 CAATGCGGCGACGAA CGACACCA GGA TGGTGTCG ATCATCATCGTGCCG RPA3028 3430441 - 3429602 - | hypothetical protein TERM 2449 3429672 - 3429710 + g 73 -5.9 -4.33274 | gap 2, overlap 3429673 CAATCGCTCCGCTTC AGC-GCCGC-CTTGGCGTC GGC GTTGCCGAGCGCGGCAGCC TTTTCGTAGTATGCC RPA3029 3430730 - 3430912 + | hypothetical protein RPA3030 3431088 - 3431384 + | hypothetical protein TERM 2450 3431479 - 3431448 - T 100 -14.4 -5.75342 | opp_overlap 3431451, overlap 3431451 CTCTCCCAAAAAAAA GAACGCCGCGAGCT CACC AGCGCGCGGCGTTG TTGTTTTGGGGCCGT TERM 2451 3431451 - 3431476 + T 100 -16.1 -4.20868 | opp_overlap 3431448 3431451 TCCCAAAAAAAAGAA CGCCGCGAGCT CACC AGCGCGCGGCG TTGTTGTTTTGGGGC TERM 2452 3431476 - 3431451 - T 100 -16.1 -4.96028 | opp_overlap 3431451, overlap 3431448 TCCCAAAAAAAAGAA CGCCGCGAGCT CACC AGCGCGCGGCG TTGTTGTTTTGGGGC RPA3031 3432126 - 3431503 - | acetyltransferase RPA3032 3432779 - 3432381 - | phenylacetic acid degradation-like protein TERM 2453 3432807 - 3432836 + r 73 -8.5 -3.99985 | gap 1 CTGCCCGCCAATGTG GCGACGGCGGCGCG GGC TGC-CTACCGTCGC TTATTTGGATGTGTC argE 3434207 - 3432927 - | acetylornithine deacetylase TERM 2454 3433687 - 3433636 - G 77 -7.9 -4.36914 | opp_overlap 3433675, overlap 3433638 GGCTCGGGGATAAAA CAGGCATCGGCCCGATAGCCG-CGC TGCA GCGTCGAC-AGCGCGCCAACGCCGG TGCTCTCCTCTTCGA TERM 2455 3433685 - 3433638 - G 71 -9.1 -3.79419 | opp_overlap 3433675, overlap 3433636 CTCGGGGATAAAACA GGCATCGGCCCGATAGCCG-CGC TGCA GCGTCGAC-AGCGCGCCAACGCC GGTGCTCTCCTCTTC RPA3034 3434340 - 3434603 + | hypothetical protein RPA3035 3435048 - 3434632 - | hypothetical protein RPA3036 3435408 - 3435160 - | hypothetical protein TERM 2456 3435351 - 3435321 - G 84 -17 -3.18264 | CGTCCCACCCACGAA TTGTTTCGTCGGAC CTC GGCCGACGAAACAA TTCGGAGAAAAGCAT TERM 2457 3436221 - 3436272 + r 100 -21.1 -3.54779 | gap 1, overlap 3436180 3436212 3436229 ATAGCGGCGGCGCTT CGATCACGTCGGCGCTTC-GCTGT TGATC GCAGCCGAAGCGCCGATTTGATCG TTACTTGATTTTGAT TERM 2458 3436229 - 3436264 + r 95 -16.3 -3.86776 | gap 1, overlap 3436180 3436212 3436221 GGCGCTTCGATCACG TCGGCGCTTC-GCTGT TGATC GCAGCCGAAGCGCCGA TTTGATCGTTACTTG RPA3037 3436868 - 3436290 - | CreA family protein RPA3038 3437018 - 3438631 + | hypothetical protein RPA3039 3438785 - 3439723 + | polysaccharide deacetylase RPA3040 3439761 - 3440324 + | hypothetical protein RPA3041 3440777 - 3440328 - | hypothetical protein TERM 2459 3440869 - 3440851 - R 93 -3 -5.59655 | overlap 3440854 CAAACGAACAAAAAA CGACAGGC CTG ACCTGCTG CCTCAGGCGAACAGC mao 3443196 - 3440872 - | malic enzyme TERM 2460 3443081 - 3443060 - G 72 -11.5 -3.61517 | opp_overlap 3443064 3443073, overlap 3443061 ACGCCGGGGGAATAA GCCAGCGCG AGAT CGCGCTGGT TGGCGAGTGGCTTCG TERM 2461 3443080 - 3443061 - G 72 -15 -2.76696 | opp_overlap 3443064 3443073, overlap 3443060 CGCCGGGGGAATAAG CCAGCGCG AGAT CGCGCTGG TTGGCGAGTGGCTTC aspS 3445002 - 3443227 - | aspartyl-tRNA synthetase TERM 2462 3443859 - 3443824 - G 83 -14.7 -3.73914 | opp_overlap 3443822 3443839 3443841 3443853 ACCAGCCACGAAGAA CGCGGCGTCGC-CGGCC TTCA GGCCGAGCG-CGGCGCG GATCGCTTCGGTGCG TERM 2463 3446680 - 3446668 - g 70 -6.2 -4.25104 | overlap 3446669 CCCCTTCGAGGAAAA GGCG GAATT CGCC CGCTATGCGGAGCCG RPA3044 3445262 - 3446740 + | hypothetical protein rnd 3446844 - 3448022 + | ribonuclease D TERM 2464 3448554 - 3448506 - g 73 -15.3 -2.52543 | gap 1 ACGCGCCCGAAGTGA TCCTCGCGGCGATGCAG-GCCG AGCTGG CGGCGCTGCATCGCAGCGGCGA GCTGCGCGACATCCC RPA3046 3448019 - 3448942 + | hypothetical protein RPA3047 3450469 - 3448964 - | Ppx/GppA phosphatase TERM 2465 3449590 - 3449578 - G 72 -4.8 -4.52589 | GCTGCTCATACAAAA GTCC TTCGC GGAC GCCATAGGTCGAGAA TERM 2466 3450157 - 3450182 + g 75 -11.8 -3.65046 | CGCCGCAGATCCGTT CGGCCTCGGC GATGAA GTCGGGGCCG TTCTTGGCGTCGCGG RPA3048 3452773 - 3450482 - | polyphosphate kinase TERM 2467 3452614 - 3452646 + g 95 -16.9 -3.84644 | opp_overlap 3452610 3452609, overlap 3452609 3452618 GATTGATGAATCGCT CGGGGCCGGCGGCGA TCA TCGACGCCGGCTCGG TTTCGCCTTTTTTCT TERM 2468 3452618 - 3452642 + g 80 -17.1 -2.67441 | opp_overlap 3452610 3452609, overlap 3452614 3452609 GATGAATCGCTCGGG GCCGGCGGCGA TCA TCGACGCCGGC TCGGTTTCGCCTTTT RPA3049 3453532 - 3452843 - | hypothetical protein RPA3050 3454192 - 3453563 - | CDP-alcohol phosphatidyltransferase TERM 2469 3454161 - 3454147 - G 73 -4.2 -4.58685 | overlap 3454136 3454135 AAATCCGCCGAAAAA CCTCGA CTT TCGACG GTTGAGCGGGCTGGT TERM 2470 3455015 - 3454990 - g 70 -2.3 -4.59511 | opp_overlap 3455004 3455005, overlap 3454991 AAGATCGTCGAAAAA TCCGGCCTGCC CTAT GACGCGCCGGC GCCGTTTTCGCCGGT purM 3454375 - 3455448 + | phosphoribosylaminoimidazole synthetase TERM 2471 3455961 - 3456012 + G 89 -10.9 -4.21462 | gap 3, opp_overlap 3455947, overlap 3456003 3456008 ACGCCGGACACGCTG GCCGCGCGCGTGCTCGCGGTCGA-GC ATC GCATCTACCCCGAG-GCGC-TGCGGC TTTTGGCTGCTGGCT purN 3455457 - 3456110 + | phosphoribosylglycinamide formyltransferase cspA3 3456377 - 3456174 - | cold-shock DNA-binding domain protein TERM 2472 3456435 - 3456407 - H 100 -16 -5.4251 | TCTAGATACAAAAAA GACGCGGCACGC TGCCC GCGTGCCACGCC ACAAACGGCGAACCC RPA3054 3456869 - 3457642 + | Crp/FNR family transcriptional regulator TERM 2473 3457671 - 3457688 + T 100 -12.7 -5.55769 | opp_overlap 3457671 3457665 TCGTTCAAAGATGAA GCGAGCC ACCC GGCTCGC TTTTTTCTTGTCCGG TERM 2474 3457688 - 3457671 - T 76 -12.7 -3.45571 | opp_overlap 3457671, overlap 3457665 TCGTTCAAAGATGAA GCGAGCC ACCC GGCTCGC TTTTTTCTTGTCCGG RPA3055 3458546 - 3457725 - | TerC family integral membrane protein RPA3056 3459041 - 3458619 - | nucleoside-diphosphate kinase TERM 2475 3460133 - 3460101 - g 100 -14.1 -4.36914 | overlap 3460132 CGGCGCCGGAGAAAA CGCTGTCGCCGCCGA TCA TCGCCGTCGACAACG TCGCGGTCGGCTACG TERM 2476 3461057 - 3461037 - g 78 -14.7 -3.33815 | AGTGGTTGGAAGCAA GTGCGGCGC AGG ACGCCGCAC AAGGCTGAGAGTTAT RPA3057 3459188 - 3461065 + | ABC transporter ATPase RPA3058 3461608 - 3461069 - | hypothetical protein RPA3059 3462188 - 3461736 - | DNA polymerase III subunit chi RPA3060 3463701 - 3462199 - | leucyl aminopeptidase TERM 2477 3463207 - 3463249 + g 70 -11.8 -3.45737 | overlap 3463218 CTTCTTGGCTGCCGC CGGATCGGCCACTGCGAGCG TGA CGCTGGCATTCGCCGCGCCG TTCTCGTCGTCCTTC TERM 2478 3464401 - 3464415 + G 71 -9.2 -3.78934 | overlap 3464394 GGCCTATCGCCGATT CGGCTG TTC CGGCCG TTCTTCTACGCCACC TERM 2479 3465038 - 3465077 + G 72 -6.8 -4.1721 | overlap 3465033 GTAACTTCTCGATGG CCGGCGCGGTGCTGGTCG CCTT CGTCGTGCGACTCGCCGG TTTTGCGCTGTCGGT RPA3061 3464110 - 3465276 + | permease YjgP/YjgQ TERM 2480 3466118 - 3466132 + G 77 -4.2 -4.72272 | opp_overlap 3466118, overlap 3466120 CTGCAGTATCACAAG CTGCTT GCA AAGCCG TTTTTGCTGGCCGCG RPA3062 3465290 - 3466375 + | permease YjgP/YjgQ TERM 2481 3466675 - 3466650 - g 83 -12.5 -4.05004 | opp_overlap 3466644 3466664, overlap 3466647 CGACTACAACAACAA GCGCGTCGCCG CGGT CGGCAACGTGC AGATGTATTACAACG TERM 2482 3466987 - 3466974 - g 73 -3.7 -4.63527 | overlap 3466975 GGACGATCCGAAAAA GCCGC CGCT GTGGC AGGTCAAGGGTGCGC RPA3063 3466375 - 3468888 + | organic solvent tolerance protein RPA3064 3468967 - 3469893 + | hypothetical protein pdxA 3469954 - 3470967 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2483 3471759 - 3471769 + G 83 -8.2 -4.65916 | overlap 3471718 CGTGCCGAGACCGTG CCGG TGT CCGG TTTTGTTGCCATGGC ksgA 3470964 - 3471827 + | dimethyladenosine transferase RPA3067 3471844 - 3472902 + | putative NAD-dependent alcohol dehydrogenase TERM 2484 3473041 - 3473016 - g 95 -9.1 -5.00616 | gap 1 TTGTCGCGGAAAAAA CGGACGAACAGA AGT TCCGTT-GTCCG CGTCAGAATGGGGAA TERM 2485 3473255 - 3473234 - g 70 -10.2 -3.66018 | TGACCACGCCAACAA GCGCAAGT GCTGGT ACTTGCGC AAGGCGGACGCCGGG TERM 2486 3473591 - 3473567 - g 82 -17.1 -2.89564 | CGGCGAGGCGACACA GGCGGCGGCAG CGC CTGCCCCCGCC GCCGAGCAGTCGAAC RPA3068 3472944 - 3474239 + | hypothetical protein gmk 3474905 - 3474243 - | guanylate kinase TERM 2487 3474384 - 3474416 + g 70 -6.1 -4.24342 | GACCACGATGTAATC GTAGGCGTCGAAGTG GCT CATCTCGTCGCCGGC TTTCTTCATCCGACC RPA3070 3475795 - 3474908 - | hypothetical protein RPA3071 3477153 - 3475897 - | aminodeoxychorismate lyase TERM 2488 3476001 - 3476042 + g 83 -14.9 -3.72695 | CGGCTGCCGCAGGAT CGCCGGCGGGCTCGGCAGC CGGA GCGGCCGCGGTCGGCGGCG TTTCCTCCGGCGGCT fabF 3478621 - 3477356 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2489 3478698 - 3478660 - R 100 -16.8 -4.17048 | gap 1, opp_overlap 3478663, overlap 3478663 CGCGGTGCAAAACAA GAAGCCGG-TGGACCGC TTTTGT GCGGTCCGTCCGGCTTC CATCACACCGCGCGG TERM 2490 3478695 - 3478663 - R 89 -12.7 -4.20868 | gap 1, opp_overlap 3478663, overlap 3478660 GGTGCAAAACAAGAA GCCGG-TGGACCGC TTTTGT GCGGTCCGTCCGGC TTCCATCACACCGCG TERM 2491 3478663 - 3478695 + r 78 -14.9 -3.05384 | gap 1, opp_overlap 3478663 3478660 GGTGCAAAACAAGAA GCCGG-TGGACCGC TTTTGT GCGGTCCGTCCGGC TTCCATCACACCGCG acpP 3478957 - 3478718 - | acyl carrier protein fabG2 3479999 - 3479262 - | 3-oxoacyl-(acyl-carrier-protein) reductase fabD 3480978 - 3480019 - | malonyl CoA-acyl carrier protein transacylase RPA3076 3481244 - 3482593 + | putative diguanylate cyclase (GGDEF) rpsF 3482765 - 3483241 + | 30S ribosomal protein S6 TERM 2492 3483429 - 3483452 + G 77 -10.9 -3.7829 | opp_overlap 3483420 3483417 GAAGCAGCGCGAGCT CGCGCGCGC CATCAA GCGCGCCCG TTTCCTCGGTCTGCT rpsR 3483247 - 3483486 + | 30S ribosomal protein S18 TERM 2493 3483523 - 3483492 - f 100 -23 -3.17392 | opp_overlap 3483493, overlap 3483495 GATCCGCTAATCGAA GGAGCCCCGCGGCG TCCG CGCCGCGGGGCTCT TTTTCTTCTCTCATA TERM 2494 3483493 - 3483522 + F 100 -26.5 -5.25699 | opp_overlap 3483492 3483495 ATCCGCTAATCGAAG GAGCCCCGCGGCG TCCG CGCCGCGGGGCTC TTTTTCTTCTCTCAT TERM 2495 3483520 - 3483495 - f 100 -23.3 -2.78712 | opp_overlap 3483493, overlap 3483492 CCGCTAATCGAAGGA GCCCCGCGGCG TCCG CGCCGCGGGGC TCTTTTTCTTCTCTC RPA3079 3483613 - 3484563 + | hypothetical protein rplI 3484599 - 3485186 + | 50S ribosomal protein L9 TERM 2496 3485215 - 3485240 + T 100 -20.5 -4.74132 | opp_overlap 3485215 CAGACCATCGACGAA GCCCGGCCTGA GTGA TCAGGCCGGGC TTTTTGCTGCCGTCT TERM 2497 3485240 - 3485215 - T 95 -20.5 -3.1994 | opp_overlap 3485215 CAGACCATCGACGAA GCCCGGCCTGA GTGA TCAGGCCGGGC TTTTTGCTGCCGTCT TERM 2498 3485325 - 3485305 - T 100 -19.7 -4.72272 | opp_overlap 3485305 TCGTCCCATGAAAAA GGGCCGCGC ATC GCGCGGCCC TTTCAACGTCAGCAG TERM 2499 3485305 - 3485325 + T 100 -19.7 -3.57144 | opp_overlap 3485305 TCGTCCCATGAAAAA GGGCCGCGC ATC GCGCGGCCC TTTCAACGTCAGCAG RPA3081 3486322 - 3485351 - | hypothetical protein TERM 2500 3486361 - 3486344 - H 93 -8.3 -5.08824 | opp_overlap 3486343, overlap 3486345 CTCCGATGCAAAAAA TCGCCGC AGCA GCGGCGG TGACCTTTTAGCGAA TERM 2501 3486360 - 3486345 - H 75 -11.8 -3.64812 | opp_overlap 3486343, overlap 3486344 TCCGATGCAAAAAAT CGCCGC AGCA GCGGCG GTGACCTTTTAGCGA TERM 2502 3487813 - 3487795 - g 70 -6.6 -4.18018 | overlap 3487775 3487797 GCGCGGGATGGAAAA GAGCCGCA CGC CGCGGCTG CAACTCGCCGGCGAA cfa2 3486581 - 3487831 + | cyclopropane-fatty-acyl-phospholipid synthase RPA3083 3488050 - 3487853 - | hypothetical protein dnaB 3488450 - 3489946 + | replicative DNA helicase RPA3085 3490014 - 3491255 + | alanine racemase TERM 2503 3491349 - 3491302 - T 100 -33.8 -3.09635 | opp_overlap 3491302 3491310 3491314, overlap 3491310 3491314 ATTGCGAGGAGCGAA GCGACGAAGCAATCCAGCACAG TGAA CTGCGCTGGATTGCTTCGTCGC TTCGCTCGCAATGAC TERM 2504 3491302 - 3491349 + T 100 -31.6 -3.06183 | opp_overlap 3491302 3491310 3491314, overlap 3491310 3491314 ATTGCGAGGAGCGAA GCGACGAAGCAATCCAGCACAG TGAA CTGCGCTGGATTGCTTCGTCGC TTCGCTCGCAATGAC TERM 2505 3491310 - 3491341 + T 89 -17.4 -3.22388 | opp_overlap 3491302 3491310 3491314, overlap 3491302 3491314 GAGCGAAGCGACGAA GCAATCCAGCACAG TGAA CTGCGCTGGATTGC TTCGTCGCTTCGCTC TERM 2506 3491341 - 3491310 - T 95 -19.6 -3.22388 | opp_overlap 3491310 3491302 3491314, overlap 3491302 3491314 GAGCGAAGCGACGAA GCAATCCAGCACAG TGAA CTGCGCTGGATTGC TTCGTCGCTTCGCTC TERM 2507 3491314 - 3491337 + T 71 -11 -3.41581 | opp_overlap 3491314 3491310 3491302, overlap 3491310 3491302 GAAGCGACGAAGCAA TCCAGCACAG TGAA CTGCGCTGGA TTGCTTCGTCGCTTC TERM 2508 3491337 - 3491314 - T 76 -13.2 -3.41581 | opp_overlap 3491310 3491302 3491314, overlap 3491310 3491302 GAAGCGACGAAGCAA TCCAGCACAG TGAA CTGCGCTGGA TTGCTTCGTCGCTTC RPA3086 3491642 - 3491385 - | hypothetical protein RPA3087 3493276 - 3491639 - | hypothetical protein RPA3088 3494128 - 3493736 - | hypothetical protein TERM 2509 3494246 - 3494230 - H 74 -2.3 -4.91285 | ACGAATAGAACAAAA TGTGA ACATCAA TCACA CATCTTTCCGGGTCC RadA 3494276 - 3495733 + | DNA repair protein RadA RPA3090 3495947 - 3496582 + | colicin V production protein purF 3496606 - 3498135 + | amidophosphoribosyltransferase RPA3092 3498265 - 3499008 + | putative oxidoreductase TERM 2510 3499823 - 3499865 + G 72 -13.3 -3.14344 | opp_overlap 3499808 3499811, overlap 3499833 GCAGGCCGCCGAGTT CGGCATCACCGCGGGCGGC CAGAA GCTGGCCGCGCTGCTGCTG TTCATCAACGACGTG TERM 2511 3499833 - 3499860 + G 75 -15.6 -2.77523 | gap 1, opp_overlap 3499808 3499811, overlap 3499823 GAGTTCGGCATCACC GCGG-GCGGCCAG AAG CTGGCCGCGCTGC TGCTGTTCATCAACG RPA3093 3499092 - 3500318 + | urea/short-chain binding protein of ABC transporter TERM 2512 3500347 - 3500368 + T 100 -17.3 -3.83026 | CATCCGCTCAGCTTT CAGGCGCCG CTTG CGGCGCCTG TTTGCTGTCGGCGGC RPA3094 3501625 - 3500339 - | major facilitator transporter engA 3503001 - 3501622 - | GTP-binding protein EngA TERM 2513 3503045 - 3503070 + r 76 -8.3 -4.16842 | gap 1, overlap 3503045 CTGTCAATGTCGCTC GGG-TCAGACCT TCG AGGTCGGAGCCC TTTATTAGCGCTGGA RPA3096 3503626 - 3503075 - | hypothetical protein RPA3097 3504361 - 3503672 - | hypothetical protein TERM 2514 3504143 - 3504173 + g 77 -12.4 -3.66018 | opp_overlap 3504138 3504152 3504153 GGCGAGATCAGCGGC GGCGGCAAACGCCG CGC CGGCTTCAGCCGCC TTCTTGGCCTCGTAA TERM 2515 3504475 - 3504440 - R 81 -13.3 -3.75153 | gap 1 CGCTGGCAAGGCAAA GCGAGCCGGATCAAGG GGATA CCTCGA-CCGGCGCGC ACGCCTGCCGTGACC panB 3505315 - 3504491 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase RPA3099 3505902 - 3505318 - | NnrU family protein TERM 2516 3506204 - 3506232 + G 72 -13.1 -3.15249 | GGGGGCGACACCGGA TCTGGTCGGCCGG GTG CTGGCCGATCAGC TTCATACGCAATATC RPA3100 3506040 - 3507044 + | hypothetical protein RPA3101 3507578 - 3507093 - | hypothetical protein RPA3102 3507948 - 3507682 - | hypothetical protein RPA3103 3508823 - 3508623 - | hypothetical protein gatB 3510768 - 3509284 - | aspartyl/glutamyl-tRNA amidotransferase subunit B RPA3105 3512249 - 3510864 - | patatin-like phospholipase domain-containing protein RPA3106 3513497 - 3512391 - | signal transduction histidine kinase gatA 3515052 - 3513574 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 2517 3515100 - 3515077 - H 71 -5.9 -4.3739 | overlap 3515078 CACGCCTGGATAAAA GCCGGCGAC AGGCCG GTCACGGGC GCCGCGGATCGTGCG RPA3108 3515232 - 3515519 + | hypothetical protein RPA3109 3515467 - 3515751 + | hypothetical protein RPA3110 3515961 - 3515755 - | hypothetical protein gatC 3516260 - 3515973 - | aspartyl/glutamyl-tRNA amidotransferase subunit C RPA3112 3517424 - 3516348 - | 2-nitropropane dioxygenase, NPD TERM 2518 3517108 - 3517083 - G 74 -14.7 -3.05596 | opp_overlap 3517088, overlap 3517061 CATCGCCGCATCGAA CGGCGCCCG GCTCGCCG CGGGCGCCG GCATCGCCGGGTCGA RPA3113 3517583 - 3518065 + | Holliday junction resolvase YqgF RPA3114 3518087 - 3518473 + | SecC motif-containing protein RPA3115 3520285 - 3518600 - | acyl-CoA dehydrogenase TERM 2519 3520318 - 3520299 - R 76 -7 -4.42653 | opp_overlap 3520304, overlap 3520300 3520313 ATGTTACGCAGAAAA CCGCCGCG ATGA CATGGCGG ATCGCCACGCCCTCA ipdC 3521962 - 3520331 - | indole-3-pyruvate decarboxylase TERM 2520 3520485 - 3520430 - G 73 -12.6 -3.37796 | gap 4, overlap 3520433 TTCGATCAGTGAGAA CACCCCGCGCCG--CTCGACCGC-GCGC TGCA GCGCCGCGG-CGAGTTCGGCGCGCGTCG TCACCCGCTCGCCGA TERM 2521 3520482 - 3520433 - G 71 -15.1 -2.55216 | gap 4, overlap 3520430 GATCAGTGAGAACAC CCCGCGCCG--CTCGACCGC-GCGC TGCA GCGCCGCGG-CGAGTTCGGCGCGCG TCGTCACCCGCTCGC TERM 2522 3521687 - 3521636 - G 74 -14.5 -2.95476 | gap 3 ATGATGCAGCAGATA GCCGCTGGT-GCGCTCG-C-GCGCGC CCG GCGCGCCGGCGATCACCACCACCGGC GAGCGCTCCGCATAG TERM 2523 3522308 - 3522293 - g 82 -6.1 -4.84359 | overlap 3522294 GCAGGTCGACAAAAA GCGCA CCAGTT TGCGC GGCCGCACCCAGGTC pyrB 3522153 - 3523106 + | aspartate carbamoyltransferase catalytic subunit pyr 3523126 - 3524436 + | dihydroorotase RPA3119 3524580 - 3525191 + | putative glycerol-3-phosphate acyltransferase PlsY DprA 3525318 - 3526460 + | DNA processing protein DprA, putative TERM 2524 3526553 - 3526569 + G 85 -6.5 -4.84761 | GAATCACCTGCCAAT GCTGTTC TAC GAACCGC TTTTTCTGACAGTCT TERM 2525 3527096 - 3527071 - g 81 -12.5 -3.86835 | TGAAATATCACGAAA TGGCCGCGCAG ATCG CCGCGCCGCCA TCGCCGCGCTGGCGC TERM 2526 3527100 - 3527135 + G 73 -12.4 -3.35996 | GCCGCGCCGCCATCG CCGCGCTGGCGCGACG CACG CGACGGGCTGGTGCGG TTCTGCATGGGGCTG RPA3121 3526551 - 3527963 + | putative alginate o-acetyltransferase AlgI TERM 2527 3528604 - 3528630 + G 86 -16.6 -3.53811 | GCGCTGGTGTATGCG CAGCGGCATGTC CAG GCCATGCCGCTG TTTCCCCGCGATGGC RPA3122 3527968 - 3529158 + | hypothetical protein TERM 2528 3529219 - 3529183 - T 100 -15.2 -5.00616 | opp_overlap 3529188 3529189, overlap 3529185 CCCGGCTCCAAAAAA GCCAACGGCCCGAAGC GGTGA GCTTCGAGCCATTGTC CAGGAGCGGACGTAC TERM 2529 3529217 - 3529185 - T 81 -16.4 -2.75708 | opp_overlap 3529188 3529189, overlap 3529183 CGGCTCCAAAAAAGC CAACGGCCCGAAGC GGTGA GCTTCGAGCCATTG TCCAGGAGCGGACGT TERM 2530 3529425 - 3529379 - T 73 -3.2 -4.77216 | gap 3, opp_overlap 3529399 AACAAGACCGAAAAA TCCCGCGC--AATGAATAGGATC GGGG GA-CCTGTTCATTCAGCGCTGGA ATTGCGCCGGCGGCG RPA3123 3529704 - 3529411 - | hypothetical protein TERM 2531 3529816 - 3529842 + H 100 -10.9 -5.13344 | gap 2 TGTTCCGGGCAATCT GGCCGG-C-GCGA GTC TCGCAGACCGGCC TTTTTCTCTTCATCT TERM 2532 3530610 - 3530577 - g 75 -4.5 -4.66953 | gap 1 GGAAGACTTCAAAAA GGCGATCGAAGCGG CGAACTT CCGCGTCG-CCACC GTCGAAGCCAAGCCG TERM 2533 3532568 - 3532557 - g 70 -3.6 -4.57073 | overlap 3532545 GACCGCGGCGAAAAA GGCC GCCA AGCC TAAAGACGCGGCCAA TopA 3529873 - 3532608 + | DNA topoisomerase I TERM 2534 3533309 - 3533291 - g 74 -7.4 -4.18018 | overlap 3533292 GCTCGCCAGCGAAAA GGCGATCA GCC TGATCGCG ATCCACACCCACGAC TERM 2535 3533522 - 3533499 - g 70 -3.7 -4.45738 | overlap 3533500 GATCCGAACAACAAA GGCGGCGTG ATCCTG CACGTCGCG ATCGCCGACGTCGCC TERM 2536 3534695 - 3534664 - g 79 -11.4 -3.82433 | opp_overlap 3534684, overlap 3534656 ACAACTACGACGAAA CCCGCCACGCGCTC ATCG GCTCGCGCAGCGGG GCCATGCACCGGCTG RNR 3532611 - 3534956 + | ribonuclease R RPA3126 3534956 - 3535384 + | hypothetical protein RPA3127 3535454 - 3536209 + | NUDIX hydrolase TERM 2537 3536277 - 3536237 - T 88 -16.2 -3.36749 | opp_overlap 3536248, overlap 3536238 CATTTGCAAGAGCAA GCTCGAACTAACGGCGGG ACCAA CGCGCCGTCAGTTCGAGT AGCAAGGCGATCGCC TERM 2538 3536276 - 3536238 - T 90 -19.7 -2.61728 | opp_overlap 3536248, overlap 3536237 ATTTGCAAGAGCAAG CTCGAACTAACGGCGGG ACCAA CGCGCCGTCAGTTCGAG TAGCAAGGCGATCGC RPA3128 3537392 - 3536244 - | putative transport protein TERM 2539 3536968 - 3536952 - G 75 -9.3 -4.15222 | overlap 3536921 ATGGCCGGCAACAAA GCCGGCC ACC GTCCGGC TGAGCAGGATGCCGC rpmG 3537789 - 3537956 + | 50S ribosomal protein L33 TERM 2540 3537990 - 3538007 + T 100 -14.1 -4.45168 | ACAGCATTCCTTCCG CGGGGCC TTCG GGCCCCG TTTCTATTTTGGGCA RPA3130 3538606 - 3538223 - | XRE family transcriptional regulator RPA3131 3538934 - 3538617 - | hypothetical protein pleD 3540343 - 3538970 - | response regulator PleD TERM 2541 3539608 - 3539624 + g 71 -9.3 -3.79906 | CACCGATCTCAAGCC CGCGCAG CAG CCGCGCG TTGTTCTCGGCCTCG RPA3133 3540719 - 3540354 - | response regulator receiver (CheY-like protein) TERM 2542 3540795 - 3540746 - H 89 -11.4 -4.26076 | gap 2, opp_overlap 3540746 3540747 CTACTCGCACTAAAA TGCCCG-GGCCGGCGGCCCG-CGA TCGT TCGACAAGCCGCAAGACTCGGGCA TGATTGAATAAAATA RPA3134 3540845 - 3541144 + | hypothetical protein dinP 3541141 - 3542436 + | DNA polymerase IV RPA3136 3543427 - 3542561 - | hypothetical protein RPA3137 3543689 - 3544168 + | endoribonuclease L-PSP TERM 2543 3544231 - 3544184 - f 91 -16.2 -3.6502 | gap 1 CACGCGGGAGCCAAA GCGATGCGCGCGCCCGACTGGCT GAC AGCCCGACCGGT-CGCGCATCGC GGCCTGCACGACCGC RPA3138 3544187 - 3544933 + | glycerophosphoryl diester phosphodiesterase RPA3139 3544936 - 3546255 + | hypothetical protein RPA3140 3546263 - 3546733 + | histidine triad (HIT) protein RPA3141 3547200 - 3546739 - | hypothetical protein TERM 2544 3546839 - 3546806 - G 72 -13.9 -3.05384 | gap 1 GTGCCGTCGAGGCAA TCGAGGCCGCGCACCA ACA CGGT-CGCGCCCTCGA TCCCGACTACCGCCA RPA3142 3547593 - 3547249 - | hypothetical protein TERM 2545 3547460 - 3547410 - G 70 -6.6 -4.25104 | CCGGCGGCAGGAAAA GGATCTGGGCAATCACGCCGGCCA GGA TCGCAGTCGCGACCGCGCGGACCC AAATCAAAAGCTCCG RPA3143 3548333 - 3547590 - | hypothetical protein TERM 2546 3547783 - 3547773 - G 70 -8.2 -4.0162 | GGTCGACAGCAGAAA CGCC AGC GGCG TCAGCAGCAGGATCG TERM 2547 3548302 - 3548283 - G 80 -9.2 -4.26871 | overlap 3548287 CAAGCCACGAAGAAA GGCACGGC CGGG GCTGTGCC ACTGCGGCGAAGTCG RPA3144 3548486 - 3548845 + | hypothetical protein RPA3145 3549977 - 3548862 - | transglycosylase SLT domain-containing protein TERM 2548 3549082 - 3549140 + g 70 -10.2 -3.63515 | opp_overlap 3549090 GCGAGCGCCCGGTTG CGATTGAAGC-CGGCGGCGAGCTGCACG CCCCA CG-GCCGATCGGCGCCGAGCTTCACGCG TTGTTCGAGCTCGGC TERM 2549 3552322 - 3552302 - g 73 -6.1 -4.42386 | overlap 3552303 GGCCGAGCCAGAAAA GCCGGAA GCGCCCG TCCCGGC GTCACCGGACGACCA RPA3146 3550605 - 3552380 + | hypothetical protein TERM 2550 3552433 - 3552400 - T 95 -16.7 -3.86346 | opp_overlap 3552389 3552402, overlap 3552380 3552403 TGATCGCTCGACAAA CGACGAGGCCGGCGA TCGC TCGCCGGCCTCGCTA ATTGAGATCGTTGGT TERM 2551 3552402 - 3552431 + T 87 -19.3 -2.74488 | opp_overlap 3552380 3552400 3552403, overlap 3552389 ATCGCTCGACAAACG ACGAGGCCGGCGA TCGC TCGCCGGCCTCGC TAATTGAGATCGTTG TERM 2552 3552430 - 3552403 - T 100 -22.8 -3.00946 | opp_overlap 3552402 3552389, overlap 3552380 3552400 TCGCTCGACAAACGA CGAGGCCGGCGA TCGC TCGCCGGCCTCG CTAATTGAGATCGTT clpA 3554838 - 3552454 - | endopeptidase Clp: ATP-binding chain A TERM 2553 3552582 - 3552601 + g 72 -15 -2.70932 | CGATCTTCTCCAGCT CGACGCCG GCGA CGGCGTCG TCCTTGACCAGCACG clpS 3555430 - 3555032 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2554 3555614 - 3555654 + H 76 -14 -3.15579 | gap 2, opp_overlap 3555597 CGGAGGCGCGCCCTA GCCT-C-GCCGCAGGCGGAG GAC CGCCGCCTGCGGCTGCAGGG TTAATCGGGCGTTAG TERM 2555 3555733 - 3555718 - H 70 -7.5 -3.97042 | opp_overlap 3555717 GGACCATCAAGCAAA CCGCC CAGCTT GGCGG CATTTATGGCGCAGT RPA3149 3555834 - 3557201 + | hypothetical protein RPA3150 3557558 - 3559315 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2556 3559365 - 3559343 - T 100 -22 -3.32647 | opp_overlap 3559343 CTCGAACGAGACCAA CGCGGCCGGG CTC CCCGGCCGCG TTTTTCGTTGGCCTG TERM 2557 3559343 - 3559365 + T 100 -22 -4.87291 | opp_overlap 3559343 CTCGAACGAGACCAA CGCGGCCGGG CTC CCCGGCCGCG TTTTTCGTTGGCCTG TERM 2558 3559557 - 3559547 - T 71 -5.4 -4.431 | GATTGATCGATAAAA GTTG AAT CAAC AGCCACGCCGAAGCG RPA3151 3560372 - 3559644 - | heat shock protein DnaJ, N-terminal TERM 2559 3560355 - 3560342 - G 83 -9.5 -4.33274 | TGTAGAGCACGAAAA CGGCG ATGG CGCCG GCAATCAACGTAGGC TERM 2560 3560416 - 3560404 - R 78 -6.9 -4.65895 | overlap 3560405 3560407 3560408 GGTCGCACCGAAAAA GCACC GGC GGCGC CTCGCTGGCGGCTAC TERM 2561 3560464 - 3560408 - R 74 -14.2 -2.55361 | gap 1, overlap 3560404 3560405 3560407 GCACCGAAAAAGCAC CGGCGGCGCCTCGCTGGCGGCTACCGC ATCT GCCCGAGCAG-CAGCGCCGCGCCGCCG CCGCTGGCGGCCAGC RPA3152 3561168 - 3560428 - | hypothetical protein RPA3153 3562078 - 3561248 - | hypothetical protein RPA3154 3563273 - 3562350 - | chromosome partitioning protein ParA panC 3563540 - 3564391 + | pantoate--beta-alanine ligase RPA3156 3564837 - 3564418 - | hypothetical protein RPA3157 3565910 - 3564876 - | hypothetical protein RPA3158 3566281 - 3566090 - | hypothetical protein TERM 2562 3566375 - 3566351 - R 79 -13.5 -3.53012 | opp_overlap 3566350 3566351, overlap 3566352 3566369 TCGGCTCCCCCCAAA CCCCGCGGGCT TAT AGCACGCGGGA CGCTCTTCTGGCCAG TERM 2563 3566374 - 3566352 - R 75 -14.8 -2.71712 | opp_overlap 3566350 3566351, overlap 3566351 3566369 CGGCTCCCCCCAAAC CCCGCGGGCT TAT AGCACGCGGG ACGCTCTTCTGGCCA RPA3159 3567150 - 3566494 - | glutathione S-transferase TERM 2564 3567360 - 3567349 - R 72 -7.2 -4.15044 | opp_overlap 3567349, overlap 3567350 GCCGTGCTGAACAAA GCCG GCCA CGGC ACGCTCAGCGCGCCG RPA3160 3568353 - 3567559 - | hypothetical protein yafB 3569261 - 3568428 - | 2,5-didehydrogluconate reductase RPA3162 3569681 - 3569316 - | XRE family transcriptional regulator mgtE 3571147 - 3569726 - | magnesium transporter TERM 2565 3572053 - 3572032 - g 70 -6.6 -4.17048 | gap 1, overlap 3572035 GCTGCGCGAAAACAA CTACCGCGT CGTGC ACGCGGT-G CCCTCTGACGAAGCC RPA3164 3571310 - 3572113 + | polysaccharide deacetylase TERM 2566 3572730 - 3572754 + G 91 -17.1 -3.7347 | opp_overlap 3572701 CCTCGCCGCCCTCGA CGGCGACCGCG CCG CGCTGTCGCCG TTCTTCCGTATTCCC RPA3165 3572197 - 3573570 + | polysaccharide deacetylase RPA3166 3573642 - 3574085 + | hypothetical protein RPA3167 3574085 - 3574546 + | hypothetical protein TERM 2567 3574824 - 3574795 - T 72 -2.7 -4.67982 | overlap 3574798 3574813 3574822 GCCCATTTAACAAAA CAATGATGAGGCC ACAA GGCCAGATCAGCG TCGATCTGGGGATCG TERM 2568 3574821 - 3574798 - T 71 -5.2 -4.44914 | overlap 3574795 3574813 CATTTAACAAAACAA TGATGAGGCC ACAA GGCCAGATCA GCGTCGATCTGGGGA RPA3168 3575061 - 3574819 - | hypothetical protein lipB 3575128 - 3575865 + | lipoyltransferase RPA3170 3576134 - 3578755 + | diguanylate cyclase/phosphodiesterase RPA3171 3579211 - 3578780 - | hypothetical protein TERM 2569 3579499 - 3579514 + G 77 -10.4 -3.91897 | ATCGGTCGGACTGAC CGCCGA AGGC TCGGCG TTTCTGGATCGCGCG RPA3172 3579317 - 3580165 + | LysR family transcriptional regulator RPA3173 3580483 - 3580184 - | hypothetical protein RPA3174 3581349 - 3580483 - | hypothetical protein TERM 2570 3580848 - 3580803 - G 70 -12 -3.38812 | gap 3, opp_overlap 3580812, overlap 3580801 3580804 CGCCGGTGAAGAACA GCGCATCGA-CGCCCGC-GGCCT GAT AGGCCAACGCGCGTTCGAT-CGC GTCGTCGAGCGAGGT RPA3175 3583371 - 3581356 - | carbamoyl-phosphate synthase L chain, ATP-binding RPA3176 3583525 - 3585375 + | hypothetical protein TERM 2571 3585383 - 3585362 - T 100 -14.4 -5.68438 | CCACCAAACAAAAAA CGGCGGGG AAATAA CCCCGCCG CTCGAATTGAAGACG RPA3177 3586218 - 3585412 - | hypothetical protein TERM 2572 3585653 - 3585675 + g 74 -12.6 -3.53224 | GGCAAGCCCGAGGCG GCCGCGGCGT GAT GCGCCACGGC TTTGGCGAACAGATC TERM 2573 3586207 - 3586231 + g 72 -15 -2.7185 | gap 1, opp_overlap 3586199, overlap 3586204 GGCAAAGGGGCTTTG CCGG-GCGGCC ATTT GGCCGCACCGG TCATTCAGCAGTCCT RPA3178 3586679 - 3586281 - | hypothetical protein TERM 2574 3587980 - 3588002 + G 70 -11.2 -3.6106 | overlap 3587982 CAGTGGGTGGCGGGC TGCGGCGCCG ATG CGGCACCGTA TTTCCGCGTGTTCAA TERM 2575 3587982 - 3588000 + G 70 -11.6 -3.38201 | overlap 3587980 GTGGGTGGCGGGCTG CGGCGCCG ATG CGGCACCG TATTTCCGCGTGTTC RPA3179 3586798 - 3588249 + | deoxyribodipyrimidine photolyase TERM 2576 3588573 - 3588555 - g 86 -9.5 -4.70626 | overlap 3588546 CAAGAAGGCCAAAAA GGCCGCC AAGAA GGCAGCC AAGAAAACCGTGAAG RPA3180 3588328 - 3588645 + | hypothetical protein TERM 2577 3588697 - 3588673 - T 71 -11.3 -3.53224 | opp_overlap 3588673 GATCGGCCGGCGAAA GCCTCCGGAGC ACG GCTTCGGGGGC TTTTTGCTGTCCGCT TERM 2578 3588673 - 3588697 + T 100 -15.7 -4.80882 | opp_overlap 3588673 GATCGGCCGGCGAAA GCCTCCGGAGC ACG GCTTCGGGGGC TTTTTGCTGTCCGCT RPA3181 3589627 - 3588752 - | DMT family permease phzF 3589781 - 3590689 + | phenazine biosynthesis PhzC/PhzF protein RPA3183 3591190 - 3590744 - | hypothetical protein RPA3184 3592957 - 3591608 - | putative cylclic diguanylate phosphodiesterase (EAL) TERM 2579 3592659 - 3592638 - G 75 -4.3 -4.66537 | overlap 3592640 3592641 CGCCGGAAGACAAAA TAGCCGCCG AGGG CAACGGCGA GAAAATGCATCTGTG TERM 2580 3592754 - 3592744 - G 95 -4.6 -5.48303 | overlap 3592733 3592745 3592746 ACAAGGGCAAAAAAA GCCC GGC GAGC AAGGCCGCCGCCGTC RPA3185 3593862 - 3595880 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 2581 3595887 - 3595911 + F 91 -18.6 -3.08996 | GCCGCCTGATCATCG CCCCGGCTCG CCCCC CGAGCCGGGG TCTTCCCTCGCAATC RPA3186 3596045 - 3596395 + | hypothetical protein RPA3187 3599180 - 3596427 - | sensor histidine kinase TERM 2582 3599217 - 3599258 + r 74 -11.6 -3.40403 | gap 2, opp_overlap 3599194 3599216 3599215 GCGCCGGCAACAATC GCCGAAGCTGCCCCGACAGC GCTG GCTGCCGGGGC--CTTCCGC TTGTGATGGAAGCAA TERM 2583 3599295 - 3599319 + r 70 -9.9 -3.61715 | opp_overlap 3599275 3599274 CCCGGGATGAGCCGG GTGGCGGCAGG TCG TCGGCCGCTAC TTCTTCGGCCGGATC RPA3188 3601490 - 3599316 - | alcohol dehydrogenase RPA3189 3602435 - 3601644 - | NUDIX hydrolase RPA3190 3603393 - 3602440 - | dihydrodipicolinate synthetase RPA3191 3604374 - 3603496 - | putative short-chain dehydrogenase TERM 2584 3603775 - 3603817 + g 100 -22 -3.81488 | CGGCAGGTCTTCGGT CATCCGGGTCAGGGCGCCGG GCG CCAGCGTCCAGATCCGGATG TTGTATTTGCGGCCC RPA3192 3605381 - 3604521 - | MaoC-like dehydratase TERM 2585 3605604 - 3605586 - R 86 -13.8 -3.9392 | overlap 3605571 GGCCACCGTAAAGAA CGGCAGCG GCG CGCCGCCG TCGGTCGGCTTGAAC RPA3193 3605960 - 3605568 - | hypothetical protein RPA3194 3607108 - 3605960 - | acetyl-CoA acetyltransferase TERM 2586 3607118 - 3607139 + r 74 -2.2 -4.83615 | gap 1, overlap 3607116 TGTCAACGCAGTTCT CCG-CTGGC GTTTG GTCGGGCGG TTTTTGTGACCGCTC RPA3195 3610882 - 3607397 - | indolepyruvate ferredoxin oxidoreductase TERM 2587 3608115 - 3608166 + g 71 -12.1 -3.26531 | gap 1, overlap 3608113 3608116 CCGTGCAGCAGCGAG GCCAGCCGCGCCGGATCGG-CGGC GGCGA GCCGGCCGAGCCGGAACGCCTGGG TGTTCATCTTGATCG TERM 2588 3608116 - 3608165 + g 74 -15.6 -2.55437 | gap 1, overlap 3608115 3608113 CGTGCAGCAGCGAGG CCAGCCGCGCCGGATCGG-CGGC GGCGA GCCGGCCGAGCCGGAACGCCTGG GTGTTCATCTTGATC TERM 2589 3610945 - 3610958 + H 72 -4.5 -4.59773 | GCGGTCTGTTTCGAA CCAGT CTAA GCTGG TTTTTCCGCCTCGCG TERM 2590 3611007 - 3610985 - H 75 -3.3 -4.91109 | gap 1, opp_overlap 3610988 3610995 CGCGCATCACAAAAA GCCGGCGCGC GCGA GCA-GCCCGC CTATTCGCATTTTGA TERM 2591 3611588 - 3611546 - g 73 -13.5 -3.33261 | overlap 3611559 TCCGAACGCCCAGAA CGGCGTCACCAC-AGGCGCAG CCC CTGCGCCTCGTGCTGCC-CCG AGCGGCGGCAACGCT RPA3196 3611163 - 3611609 + | hypothetical protein TERM 2592 3611641 - 3611678 + F 70 -12.7 -2.87211 | opp_overlap 3611645 CAGTTGCAGACCTTA CAGATGCGGTGAACGGC GCAA GTCGTTCGCCGCATCGC TGTGTCCGGCAGCGT RPA3197 3611854 - 3612141 + | hypothetical protein TERM 2593 3612183 - 3612166 - T 100 -14.1 -4.2828 | opp_overlap 3612166 CGCGATCGACGAAAA GCCCCGC TCGC GCGGGGC TTTTTTGTACGTCGG TERM 2594 3612166 - 3612183 + T 100 -14.1 -5.28176 | opp_overlap 3612166 CGCGATCGACGAAAA GCCCCGC TCGC GCGGGGC TTTTTTGTACGTCGG RPA3198 3613015 - 3612206 - | hypothetical protein TERM 2595 3613110 - 3613091 - R 71 -9.2 -3.72695 | ATGTCCGGCATCAAA GCCGGCCG GGAT CAGCCAGC CGCCGTCCGGTTATT RPA3199 3613669 - 3613121 - | hypothetical protein RPA3200 3615554 - 3613758 - | putative dual serine/threonine-protein kinase/phosphatase TERM 2596 3613938 - 3613991 + g 85 -16 -3.70068 | overlap 3613938 CGCCGGATAGCGCTT G-GCCGGGTCGAGGCTGACCGCGCGT TGCA GCGCGCGGTCAACCCAGAC-CGGCAC TTTCGCATTGTGGTC TERM 2597 3613938 - 3613990 + g 79 -16.2 -2.81559 | gap 1, overlap 3613938 CGCCGGATAGCGCTT GGCCGGGTCGAGGCTGACCGCGCGT TGCA GCGCGCGGTCAACCCAGAC-CGGCA CTTTCGCATTGTGGT TERM 2598 3615131 - 3615118 - G 70 -3.7 -4.44046 | opp_overlap 3615118 3615119, overlap 3615114 CCGATGTGAAACAAA TGCGC TGCC GCGCC TTTGATCACCAGCGC TERM 2599 3615546 - 3615514 - G 100 -19.2 -4.19735 | opp_overlap 3615508 GCTGTGAAAAGGAAA CGGGAGCTTCCCCC TGAGC GGGCGAAGCTCCCG AACGCCATCAGTTTA RPA3201 3616398 - 3615559 - | formate/nitrate transporter RPA3202 3617986 - 3617129 - | hypothetical protein TERM 2600 3617577 - 3617611 + g 73 -3.5 -4.59109 | gap 1, opp_overlap 3617557, overlap 3617579 CCTAACGCCAGCCAG CGCTGCTCGGCGGC GATCCGGA GCTGC-GAGCGGGG TTTTTCGGAGGTCTC TERM 2601 3618175 - 3618137 - R 91 -9 -4.62069 | gap 2, opp_overlap 3618143, overlap 3618139 3618142 GCGTCAGCTCAAAAA CACGACGGGCGGTGATCG TGTCG CGATCACCGCCC-T-GTT CAACCAAACGAGCCG TERM 2602 3618177 - 3618139 - R 83 -12.6 -3.92746 | gap 2, opp_overlap 3618143, overlap 3618137 3618142 GTCAGCTCAAAAACA CG-AC-GGGCGGTGATCG TGTCG CGATCACCGCCCTGTTCA ACCAAACGAGCCGAT TERM 2603 3618172 - 3618142 - R 88 -16.9 -3.02233 | opp_overlap 3618143, overlap 3618137 3618139 AGCTCAAAAACACGA CGGGCGGTGATCG TGTCG CGATCACCGCCCT GTTCAACCAAACGAG TERM 2604 3618143 - 3618171 + r 93 -21.1 -3.01712 | opp_overlap 3618142 3618137 3618139 GCTCAAAAACACGAC GGGCGGTGATCGT GTC GCGATCACCGCCC TGTTCAACCAAACGA pccB 3619729 - 3618197 - | carboxyl transferase RPA3204 3620009 - 3620425 + | hypothetical protein RPA3205 3620702 - 3620427 - | Type III secretion proteins, related to flagellar biosynthesis protein FlhB RPA3206 3622498 - 3620699 - | hypothetical protein RPA3207 3623353 - 3622568 - | ATP12 ATPase rluC 3625138 - 3623771 - | pseudouridine synthase RluD TERM 2605 3624492 - 3624510 + g 79 -7.4 -4.47328 | overlap 3624493 TCGAACAGCGTCATC GCCTTCAG CGT CTGAAGGG TTTTCTGCTCGGCTT TERM 2606 3625190 - 3625180 - R 76 -8.2 -4.13767 | opp_overlap 3625163 3625183 3625184 GTGCCTAGCGCAAAA CCGG CCG CCGG TCACGGTGGATTTGC RPA3209 3625648 - 3625343 - | hypothetical protein RPA3210 3626662 - 3625694 - | prolyl oligopeptidase family protein TERM 2607 3628077 - 3628049 - g 78 -14.5 -3.25823 | CTGCCTCGAGATCAA CGCCACCGTCGGC GTC GCCGACGACGCCG TCACCCACCTACAGC TERM 2608 3628308 - 3628265 - g 80 -14.7 -3.39327 | gap 3 GGGCCAGATCGACAA GGGCG-TC-GCCGCCGC-CGAA CAG CTCGTGCAGCGGCAGATCGCCC GCGTCGGCGAGACGC TERM 2609 3629899 - 3629878 - g 72 -13.7 -3.01712 | gap 1, opp_overlap 3629894 TGTCGGCCTGCAACA CCGGCG-CGG CCG CCGGCGCCGG TGCCGAGGCCGCCTC RPA3211 3626787 - 3630191 + | TPR repeat-containing protein RPA3212 3630220 - 3630666 + | hypothetical protein RPA3213 3630667 - 3630882 + | hypothetical protein RPA3214 3630882 - 3631649 + | hypothetical protein RPA3215 3631787 - 3632464 + | putative nitroreductase RPA3216 3632669 - 3634729 + | sensor histidine kinase TERM 2610 3634819 - 3634771 - T 84 -16.1 -3.07816 | overlap 3634777 CCCGGATGCAGCGAA GCGAAATCCGGGGACCGAACT GGTGGGA AGTCCGATCCCCGCATATCGC TGCGCTCATGCGAGC TERM 2611 3634813 - 3634777 - T 76 -10.9 -3.76952 | overlap 3634771 TGCAGCGAAGCGAAA TCCGGGGACCGAACT GGTGGGA AGTCCGATCCCCGCA TATCGCTGCGCTCAT RPA3217 3636066 - 3634858 - | branched chain amino-acid ABC transporter substrate-binding protein TERM 2612 3636091 - 3636106 + r 91 -4.7 -5.26119 | CCCTGTTGTTTTGTT GCGAT GCGGTG ATCGC TTTTGTTTTTCAGGG RPA3218 3636591 - 3636172 - | hypothetical protein RPA3219 3638631 - 3636661 - | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) TERM 2613 3637675 - 3637632 - G 72 -13.8 -3.01712 | gap 1, overlap 3637611 GCGGCTGGCCCAAGA CCTGCAGCGGCCGCGTCAGCG CGC CGCTGA-GCCGCCGCGCCAGA GACAGCGCGCGCGCC RPA3220 3640261 - 3638930 - | recombination factor protein RarA TERM 2614 3640319 - 3640341 + r 71 -12.6 -3.04461 | GGATGAGGGGGCGTT TCCGCGTGGC CGA GCCGCGCGGC TGTTACCAATCGGTG RPA3221 3641875 - 3640484 - | peptidase S1C, Do TERM 2615 3641981 - 3641947 - R 76 -7 -4.51174 | overlap 3641948 CCAGGAGAAGGAAAA GCGGCCGGCGCTCA CGCCGAC TGAGCCTCGGCGGC GTCGGATGGCGGCTC RPA3222 3642434 - 3641958 - | MarR family transcriptional regulator TERM 2616 3642514 - 3642490 - g 72 -14.3 -3.05844 | opp_overlap 3642483, overlap 3642471 TCGGCTACTCCAAGA GCCTCCCGATC GAC GATCCGGAGGC ACTGCTCGATCTTCA RPA3223 3642465 - 3643481 + | putative alginate lyase TERM 2617 3643539 - 3643572 + T 81 -16.1 -2.82015 | gap 1 TCTCTCCCCGAGTCA TTCCGGG-GCGCGAAC GAA GTTCGCGAACCCGGAA TCTCCTGCGTGTCGC RPA3224 3644499 - 3643705 - | putative short-chain dehydrogenase TERM 2618 3644753 - 3644732 - R 100 -15.1 -4.8622 | opp_overlap 3644732 TGCCGCAACGAAAAA GGCGGCGCC TTAC GGCACCGCC TTTCGAAACTTCAGA TERM 2619 3644732 - 3644753 + r 77 -12.9 -3.57561 | opp_overlap 3644732 TGCCGCAACGAAAAA GGCGGCGCC TTAC GGCACCGCC TTTCGAAACTTCAGA rplQ 3645203 - 3644784 - | 50S ribosomal protein L17 TERM 2620 3645353 - 3645326 - R 90 -15.6 -3.78775 | opp_overlap 3645321, overlap 3645327 CGCGCGATGAGGAAA GCGGCCTCATGG CGAA CCATGAGGCCGA TCGGCTTAGTAGTGA TERM 2621 3645352 - 3645327 - R 91 -19.1 -2.87051 | opp_overlap 3645321, overlap 3645326 GCGCGATGAGGAAAG CGGCCTCATGG CGAA CCATGAGGCCG ATCGGCTTAGTAGTG rpoA 3646378 - 3645359 - | DNA-directed RNA polymerase subunit alpha TERM 2622 3646504 - 3646478 - R 100 -20.2 -3.80745 | overlap 3646469 AAACAACGAATAGAA TCACCGGCGGCC TCG GACCGCCGGTGA ACAAAACTCAGACGC rpsK 3646901 - 3646512 - | 30S ribosomal protein S11 TERM 2623 3647022 - 3646965 - R 93 -19.3 -3.33483 | overlap 3646975 3646978 CACCGAAACGACGAA TGGCGAACAACAAGTGGCGAATAGGGG AAGC CCCCTACTCGCCATTCGCCATTCGCAA CTCGCAAACTTACTT TERM 2624 3647012 - 3646975 - R 100 -17.1 -3.65581 | overlap 3646965 3646978 ACGAATGGCGAACAA CAAGTGGCGAATAGGGG AAGC CCCCTACTCGCCATTCG CCATTCGCAACTCGC TERM 2625 3647009 - 3646978 - R 91 -15.2 -3.95725 | overlap 3646975 3646965 AATGGCGAACAACAA GTGGCGAATAGGGG AAGC CCCCTACTCGCCAT TCGCCATTCGCAACT rpsM 3647400 - 3647032 - | 30S ribosomal protein S13 adk 3648700 - 3647585 - | adenylate kinase TERM 2626 3647663 - 3647675 + g 84 -6.9 -4.74801 | overlap 3647647 3647621 3647669 CGCCTTGGCCTTCGA GGTCG CGG CGGCC TTTTTGGTCGCCTTC TERM 2627 3647747 - 3647762 + g 78 -6 -4.58685 | overlap 3647735 3647727 3647756 CTTGGCGGCCTTCAC GGCTGC CTTG GCTGCC TTTTTGCCAGCCTTT secY 3650028 - 3648697 - | preprotein translocase subunit SecY TERM 2628 3650141 - 3650125 - R 78 -6.5 -4.57073 | overlap 3650127 3650129 GAGCGCGTCGAAAAA TCCACCG TAC CGGCGAA GCCGGGCGCCCGCTT rplO 3650666 - 3650181 - | 50S ribosomal protein L15 TERM 2629 3650505 - 3650475 - G 70 -11.1 -3.55548 | gap 1 GAAGATGTTGTTAAA GCCAC-GCTTCGGC AGGC GCCGATGCAGCGGC ATCTGACCGCCCTCG rpmD 3650873 - 3650679 - | 50S ribosomal protein L30 TERM 2630 3650906 - 3650931 + r 77 -13.3 -3.61398 | opp_overlap 3650906 3650904, overlap 3650908 CGTCTTGTCAGAAGA CCGCGTGATCG CGCT CGATCACGCTG TTATTCGGCCACCAC TERM 2631 3650931 - 3650906 - R 73 -13.3 -3.21276 | opp_overlap 3650906 3650908, overlap 3650904 CGTCTTGTCAGAAGA CCGCGTGATCG CGCT CGATCACGCTG TTATTCGGCCACCAC TERM 2632 3650908 - 3650929 + r 82 -14.5 -3.38812 | opp_overlap 3650906 3650904, overlap 3650906 TCTTGTCAGAAGACC GCGTGATCG CGCT CGATCACGC TGTTATTCGGCCACC rpsE 3651507 - 3650932 - | 30S ribosomal protein S5 rplR 3651930 - 3651568 - | 50S ribosomal protein L18 TERM 2633 3651717 - 3651752 + g 73 -14 -3.21276 | gap 1, overlap 3651715 CGGCCTTGGCGGCAT CGATGTTCG-CGCCGGT GTT GCCGGCGTCGCGCATCG TCTTCTCCAGCGACG TERM 2634 3651865 - 3651838 - G 79 -11.2 -3.95584 | CTTGGACGAACGAAA CACCGACAGCCG CGGA CGGCCGTTGGCG GTGCGCCGCAGCGCA rplF 3652475 - 3651942 - | 50S ribosomal protein L6 TERM 2635 3652548 - 3652581 + r 88 -14.5 -3.75153 | gap 1 AATTTCCGCTCTTTC GCGCGCCCGGGCCGGA TTG TCCGGCC-GTTCGCGC TTTCGATTAGAACAC rpsH 3652986 - 3652588 - | 30S ribosomal protein S8 rpsN 3653307 - 3653002 - | 30S ribosomal protein S14 rplE 3653908 - 3653351 - | 50S ribosomal protein L5 rplX 3654215 - 3653901 - | 50S ribosomal protein L24 rplN 3654583 - 3654215 - | 50S ribosomal protein L14 rpsQ 3654895 - 3654647 - | 30S ribosomal protein S17 rpmC 3655117 - 3654908 - | 50S ribosomal protein L29 rplP 3655536 - 3655123 - | 50S ribosomal protein L16 rpsC 3656279 - 3655572 - | 30S ribosomal protein S3 rplV 3656685 - 3656302 - | 50S ribosomal protein L22 rpsS 3656974 - 3656696 - | 30S ribosomal protein S19 rplB 3657822 - 3656986 - | 50S ribosomal protein L2 rplW 3658135 - 3657836 - | 50S ribosomal protein L23 rplD 3658752 - 3658132 - | 50S ribosomal protein L4 rplC 3659479 - 3658754 - | 50S ribosomal protein L3 rpsJ 3659838 - 3659530 - | 30S ribosomal protein S10 TERM 2636 3659869 - 3659915 + r 91 -19.4 -3.04501 | overlap 3659874 TTCGTGTCGCGAATG GTGAGTAGTGAGCAGCGGACGG ACA CCGTCCGCCGCCCTCTATTCGC TATTCCCCGCTTACT TERM 2637 3659874 - 3659910 + r 86 -16.5 -3.1855 | overlap 3659869 GTCGCGAATGGTGAG TAGTGAGCAGCGGACGG ACA CCGTCCGCCGCCCTCTA TTCGCTATTCCCCGC tufA 3661116 - 3659926 - | elongation factor Tu TERM 2638 3659968 - 3659995 + g 81 -7.7 -4.67982 | gap 1, overlap 3659984 GGCACCGACCGTGCG GCCGC-CTTCGC GGATG GCGAAGCGCAGC TTTTCTTCCATCGCG fusA 3663227 - 3661155 - | elongation factor G rpsG 3663728 - 3663258 - | 30S ribosomal protein S7 rpsL 3664115 - 3663744 - | 30S ribosomal protein S12 TERM 2639 3664326 - 3664301 - H 71 -8.9 -3.86916 | opp_overlap 3664303, overlap 3664303 GAGGACCACAGCAAA GACCGGGCAGC TTCC GCTGACCGGTT CCTACCGAGGTCATG TERM 2640 3664324 - 3664303 - H 71 -11.5 -3.51778 | opp_overlap 3664303, overlap 3664301 GGACCACAGCAAAGA CCGGGCAGC TTCC GCTGACCGG TTCCTACCGAGGTCA RPA3256 3664980 - 3665966 + | hypothetical protein RPA3257 3666901 - 3666065 - | AraC family transcriptional regulator RPA3258 3667022 - 3667717 + | hypothetical protein RPA3259 3668468 - 3667935 - | hypothetical protein RPA3260 3671003 - 3668874 - | putative cation-transporting P-type ATPase TERM 2641 3670614 - 3670570 - G 100 -22.1 -2.53263 | TCGATGCTGAAGGGA GATCCCGAACGCGCGCCGATC AAG GCCCGGCGAGCGATCGGGATC AGACAGATCGCGGCC TERM 2642 3670708 - 3670697 - G 77 -3.6 -4.80882 | overlap 3670698 ACGCCAGAGCAAAAA CCGC CGCT GCGA TCATGACCGATTGCA TERM 2643 3670730 - 3670751 + g 72 -5.1 -4.43477 | gap 1, overlap 3670734 CCGATTGCAGCTTCG CGTCCTGCCA CCA TGGCA-GTCG TTTTCGTTCGGTCGC hmrR 3671069 - 3671470 + | heavy metal resistance transcriptional regulator HmrR RPA3262 3672721 - 3671513 - | putative transporter TERM 2644 3672819 - 3672772 - R 84 -16.4 -3.09635 | opp_overlap 3672780, overlap 3672776 3672780 3672784 ATTGCGAGGAGCTAA GCGACGAAGCAATCCAGCTCAG TGCA CGAAGCTGAATTGCTTCGCTGC GCTCGCAATGACGTC TERM 2645 3672815 - 3672776 - R 80 -16.6 -2.55544 | opp_overlap 3672780, overlap 3672772 3672780 3672784 CGAGGAGCTAAGCGA CGAAGCAATCCAGCTCAG TGCA CGAAGCTGAATTGCTTCG CTGCGCTCGCAATGA phnB 3673366 - 3672938 - | hypothetical protein RPA3264 3673511 - 3673972 + | MarR family regulatory protein RPA3265 3676186 - 3674048 - | putative ABC transporter TERM 2646 3676264 - 3676230 - R 81 -12.1 -3.85864 | opp_overlap 3676229, overlap 3676231 GCAGGACTACAATAA GCGACGCCGTGACTC GTTCA AAGCCACGGCGCCGG ATCTGCTGAAGCGAA TERM 2647 3676263 - 3676231 - R 79 -15.6 -2.91036 | opp_overlap 3676229, overlap 3676230 CAGGACTACAATAAG CGACGCCGTGACTC GTTCA AAGCCACGGCGCCG GATCTGCTGAAGCGA RPA3266 3678369 - 3676306 - | methyltransferase type 11 TERM 2648 3677264 - 3677234 - G 75 -11.8 -3.72576 | TTGCCCTCGAGGAAA TGCCCGCGGACGTC GCC GAGCTCCGCAGGCA GCGACTTCAGCGCCA TERM 2649 3678648 - 3678616 - R 90 -17.8 -2.87463 | opp_overlap 3678613, overlap 3678623 AATGCGGCCCAGATA TGAGAAAGGCCGGC ACAAG GCCGGCCCTTCCCA GGATTGAATGGCAGA TERM 2650 3678641 - 3678623 - R 86 -13.1 -4.04318 | opp_overlap 3678613, overlap 3678616 CCCAGATATGAGAAA GGCCGGC ACAAG GCCGGCC CTTCCCAGGATTGAA rpoC 3682880 - 3678672 - | DNA-directed RNA polymerase subunit beta' TERM 2651 3678987 - 3678999 + g 70 -10.5 -3.66018 | opp_overlap 3678985 GAGCAGCACAGGATT GCCGG TTG CCGGC TTCTTGCCCTCCTCG TERM 2652 3681928 - 3681942 + g 71 -12.8 -3.28712 | GCGCCGGTGATGACG CGGCCG CGG CGGCCG TTGTCGAACAGCGCG TERM 2653 3682256 - 3682281 + g 72 -6.7 -4.19238 | overlap 3682258 AGTCGGTCTCGGCCA TCTCGGCGCGC AGCT GCGCGTCGATC TTTTCGAGTTCGAGC TERM 2654 3682258 - 3682279 + g 80 -13.7 -3.69618 | overlap 3682256 TCGGTCTCGGCCATC TCGGCGCGC AGCT GCGCGTCGA TCTTTTCGAGTTCGA TERM 2655 3683002 - 3682969 - R 93 -20.9 -2.87211 | opp_overlap 3682961, overlap 3682988 AGCGCGGCGGAGACA CCCGGCGGCCGGCGC AAAA GCGCACGCCGCCGGG CTTGACGCGTTGAGT rpoB 3687141 - 3683017 - | DNA-directed RNA polymerase subunit beta TERM 2656 3684401 - 3684412 + g 70 -2.2 -4.63932 | gap 1, opp_overlap 3684397 TTTTCACCGAAGATG GC-GC GCA GCAGC TTTTCTTCCGGCGTC TERM 2657 3687324 - 3687292 - R 76 -7.6 -4.27584 | gap 1, overlap 3687295 ATTCCGAACGCAAAA TAACGCGCGGG-GCG CTGC CGCACCCGCCCGTCG AAAACCTCATCGTCA TERM 2658 3687321 - 3687295 - R 89 -11.5 -4.25859 | gap 1, overlap 3687292 CCGAACGCAAAATAA CGCGCGGG-GCG CTGC CGCACCCGCCCG TCGAAAACCTCATCG rplL 3687984 - 3687607 - | 50S ribosomal protein L7/L12 TERM 2659 3688032 - 3688053 + r 70 -8 -4.08767 | CAGGGTTGATTGGGA GTGAAGCG TCAGGC CGCTTCGC TTTTGGAGGCATAGG rplJ 3688558 - 3688040 - | 50S ribosomal protein L10 TERM 2660 3688482 - 3688537 + g 100 -9.6 -5.42862 | gap 1, overlap 3688479 3688484 3688486 AGGCCGGAATAGTGA GCGACGATCGCGACGCTGG-TGGTCTG GAA CAGACCATTCAGCGATTCGACCGCCTC TTTTTTTGCCGCTCT TERM 2661 3688484 - 3688535 + g 93 -10.8 -4.35085 | gap 1, overlap 3688479 3688482 3688486 GCCGGAATAGTGAGC GACGATCGCGACGCTGG-TGGTCTG GAA CAGACCATTCAGCGATTCGACCGCC TCTTTTTTTGCCGCT RPA3271 3690422 - 3689460 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2662 3690484 - 3690447 - R 100 -19.3 -3.72576 | opp_overlap 3690453, overlap 3690453 TGTTTTGCGAGCAAA CAAAAAGGGCGAACGGG TTGC CCCGTCCGCCCTTTTCA AATCGTCATCGTCCG TERM 2663 3690453 - 3690478 + r 100 -16.1 -4.15833 | opp_overlap 3690453 3690447 GCGAGCAAACAAAAA GGGCGAACGGG TTGC CCCGTCCGCCC TTTTCAAATCGTCAT TERM 2664 3690478 - 3690453 - R 100 -18.3 -5.33405 | opp_overlap 3690453, overlap 3690447 GCGAGCAAACAAAAA GGGCGAACGGG TTGC CCCGTCCGCCC TTTTCAAATCGTCAT rplA 3691199 - 3690510 - | 50S ribosomal protein L1 rplK 3691635 - 3691207 - | 50S ribosomal protein L11 nusG 3692388 - 3691858 - | transcription antitermination protein NusG secE 3692656 - 3692405 - | preprotein translocase subunit SecE TERM 2665 3692914 - 3692875 - R 84 -11.4 -4.11484 | TCCAATCTCCTAAAA GGGCCGGGCTGCCG TCGTCAGCCTTG CGACAGCACGGCCC GAGAGCCTAGTCCGA RPA3276 3693769 - 3692921 - | tonB protein exbD 3694215 - 3693766 - | putative exbD, uptake of enterochelin; tonB-dependent uptake of B colicins exbB 3695165 - 3694230 - | putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicins pigA 3695845 - 3695162 - | iron-starvation protein hasR 3699525 - 3695950 - | heme receptor RPA3281 3700551 - 3699586 - | FecR, iron siderophore sensor protein RPA3282 3701215 - 3700694 - | RNA polymerase ECF-type sigma factor, FecI TERM 2666 3702038 - 3702000 - R 100 -13.2 -4.56597 | gap 1, opp_overlap 3702004, overlap 3702003 3702004 CGCCCCCTGCAAAAA GAACGGCCGCGAGCACG ATGAAA CGCGCTCGCGGCC-TTG GTCCTATGAGAGCGA TERM 2667 3702036 - 3702003 - R 100 -17.4 -4.40561 | opp_overlap 3702004, overlap 3702000 3702004 CCCCTGCAAAAAGAA CGGCCGCGAGCACG ATGAAA CGCGCTCGCGGCCT TGGTCCTATGAGAGC TERM 2668 3702004 - 3702035 + r 93 -18.7 -3.24747 | opp_overlap 3702004 3702003 3702000 CCCTGCAAAAAGAAC GGCCGCGAGCACG ATGAAA CGCGCTCGCGGCC TTGGTCCTATGAGAG TERM 2669 3702035 - 3702004 - R 95 -20.9 -3.23855 | opp_overlap 3702004, overlap 3702003 3702000 CCCTGCAAAAAGAAC GGCCGCGAGCACG ATGAAA CGCGCTCGCGGCC TTGGTCCTATGAGAG tuf 3703251 - 3702061 - | elongation factor Tu TERM 2670 3702103 - 3702130 + g 81 -7.7 -4.67982 | gap 1, overlap 3702119 GGCACCGACCGTGCG GCCGC-CTTCGC GGATG GCGAAGCGCAGC TTTTCTTCCATCGCG TERM 2671 3704202 - 3704180 - g 71 -9 -3.78934 | CGCGGCCGACAACAA GGGCCGCCTC GCC GAGGCGTTCC CGGCCGATCCGTGGA RPA3284 3703437 - 3704660 + | beta-lactamase TERM 2672 3704674 - 3704721 + T 90 -13.4 -4.01939 | gap 1, overlap 3704681 AGTCGCCGTTCTCTC CGAGTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTCTCC TTTGCTTATAACTTC TERM 2673 3704681 - 3704714 + T 88 -17.5 -3.08298 | gap 1, overlap 3704674 GTTCTCTCCGAGTCA TTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAA TCTCTCCTTTGCTTA RPA3285 3705550 - 3704783 - | putative dehydrogenase RPA3286 3706488 - 3705733 - | phosphoglycerate mutase RPA3287 3706645 - 3707430 + | short-chain dehydrogenase/reductase SDR TERM 2674 3707732 - 3707755 + T 100 -13.8 -4.70659 | opp_overlap 3707732 TGAGAGCAACAAAAA GGCGCGATCC TTGC GGACCGCGCC TTTTTCAATCTCGAA TERM 2675 3707755 - 3707732 - T 100 -16 -5.16841 | opp_overlap 3707732 TGAGAGCAACAAAAA GGCGCGATCC TTGC GGACCGCGCC TTTTTCAATCTCGAA RPA3288 3708835 - 3707777 - | aminoglycoside phosphotransferase TERM 2676 3708939 - 3708967 + r 83 -6.8 -4.83615 | gap 2, opp_overlap 3708938 3708936, overlap 3708939 3708939 ATCTTTTCAAGAGAT GG--ATCGCCGGAT CAA GTCCGGCGATGACC TTTTTATGCGGCCTA RPA3289 3710219 - 3708987 - | acyl-CoA dehydrogenase RPA3290 3710464 - 3711126 + | TetR family transcriptional regulator RPA3291 3712817 - 3711156 - | membrane transporter RPA3292 3713293 - 3713027 - | hypothetical protein TERM 2677 3713150 - 3713201 + g 74 -12.8 -3.51825 | gap 1, opp_overlap 3713159, overlap 3713149 3713174 GGCCGAGCTGATATG CCAACGCAACGC-CAGCGCCGGACG CGG CGTCCGGCGCGGCGTGCTGCGGACG TTGTCGTTGGCGTGG TERM 2678 3713190 - 3713159 - G 100 -23.8 -3.1875 | gap 1, opp_overlap 3713149 3713150 3713174 GATATGCCAACGCAA CGCCAGCGCCGGACG CGG CGTCCGGCGC-GGCG TGCTGCGGACGTTGT TERM 2679 3713333 - 3713296 - R 71 -14.1 -2.64735 | gap 1 AGTTGATCGACATCA CTCACCTCCACGGCCGCG GAA CGCGGCGG-GACGGTGAG ATCAGGCGGCTAGCA RPA3293 3714371 - 3713619 - | branched chain amino acid ABC transporter ATP-binding protein RPA3294 3715138 - 3714368 - | branched chain amino acid ABC transporter ATP-binding protein RPA3295 3716358 - 3715135 - | inner-membrane translocator RPA3296 3717370 - 3716363 - | inner-membrane translocator TERM 2680 3717530 - 3717574 + r 95 -18.6 -3.40403 | gap 1, opp_overlap 3717531, overlap 3717531 TGCTGCTCAAGAGAC ACGTGGC-GGTCGGCTGCGCC CCAC GGCTCAGCCGACCGGTCACGA TTGTGCTCGCCGGGC TERM 2681 3717573 - 3717531 - R 93 -19.9 -3.09273 | gap 1, opp_overlap 3717531 3717530 GCTGCTCAAGAGACA CGTGGC-GGTCGGCTGCGCC CCAC GGCTCAGCCGACCGGTCACG ATTGTGCTCGCCGGG TERM 2682 3717531 - 3717573 + r 100 -22.1 -2.64099 | gap 1, opp_overlap 3717531, overlap 3717530 GCTGCTCAAGAGACA CGTGGC-GGTCGGCTGCGCC CCAC GGCTCAGCCGACCGGTCACG ATTGTGCTCGCCGGG RPA3297 3718969 - 3717617 - | branched chain amino-acid ABC transporter substrate-binding protein RPA3298 3720800 - 3719415 - | hypothetical protein TERM 2683 3720036 - 3719985 - G 76 -15.2 -3.11812 | gap 3 ATTCAGATCATTGAA CGGGCTGTCGACCGC-GGTCGCGGC GATCG GCCGCGACCGGCGG-CG-CAGCGCC TGATGAAGCCACTGG TERM 2684 3720553 - 3720534 - G 74 -15 -3.05384 | GGTCGCTGCATCGAA CGCCGGCA GGAT TGCCGGCG CGTTGAACAGCGGGA TERM 2685 3720934 - 3720892 - R 100 -14.9 -4.89521 | gap 2, opp_overlap 3720888, overlap 3720880 AGAGCGCAAAGAAAA CGCCGCGCAGGAAAACGCCTC GAT AAGGCGAT--CCCGCGCGGCG CTGATGATGTGTGGC RPA3299 3722520 - 3720964 - | putative long-chain-fatty-acid CoA ligase RPA3300 3723184 - 3722438 - | TetR family transcriptional regulator TERM 2686 3722561 - 3722579 + gH 73 -8.8 -4.04023 | GTTGTTGTTGCCGTC GGGCACCT GAA GGGTGCTC TTCTTCTTGGTTGAT RPA3301 3723347 - 3724531 + | lipid-transfer protein RPA3302 3724542 - 3724988 + | hypothetical protein RPA3303 3724985 - 3725410 + | MaoC-like dehydratase fabG3 3725434 - 3726261 + | putative 3-oxoacyl-acyl carrier protein reductase paaG2 3726282 - 3727052 + | enoyl-CoA hydratase/isomerase family protein nirK1 3727317 - 3728423 + | nitrite reductase, major outer membrane copper-containing protein xthA3 3729235 - 3728453 - | putative exonuclease III RPA3308 3729714 - 3730223 + | ycfI, putative structural proteins RPA3309 3730238 - 3730804 + | hypothetical protein TERM 2687 3730829 - 3730856 + F 100 -24.2 -4.77165 | TTACGTATGACGGCC CGGCCCGGCGGA GCAA TCCGCCGGGCCG TTTTGTTGTGAGGCG TERM 2688 3732240 - 3732216 - g 77 -9.9 -3.98113 | overlap 3732217 CAACTATCAACCAAA CTCGCACGGCC TCG GTCCGCGCGAA TCTCCGCAGCGCGGC katE 3730948 - 3733065 + | catalase TERM 2689 3733070 - 3733109 + F 76 -11.3 -3.68351 | opp_overlap 3733059, overlap 3733072 AAATGCGCTGAGGCG GCTGGCCGATGCCGGCG CTGAGC CGCCGGCATCGCTCCAC TTTGCCTCATCAGCA TERM 2690 3733072 - 3733108 + F 75 -14.5 -2.80796 | gap 1, opp_overlap 3733059, overlap 3733070 ATGCGCTGAGGCGGC TGG-CCGATGCCGGCG CTGAGC CGCCGGCATCGCTCCA CTTTGCCTCATCAGC TERM 2691 3733343 - 3733300 - g 77 -10.2 -3.98282 | overlap 3733335 CCGACACCAACGAAA CGCTGGAGCTGCCGCCGG AGACCAAG CCGGCAGAACCTGCAGCG AAGCCACAGGCGGCC RPA3311 3733281 - 3735482 + | glycosyl hydrolase TERM 2692 3735525 - 3735484 - f 71 -13.6 -2.60194 | opp_overlap 3735484 3735482, overlap 3735483 AGCTCGGCAAGTAAG GCGAAGGCACGCCGGCGC TTTGCT ACGCCGGCGTGCTGCCAC AAATTTGCGCAACCT RPA3312 3735641 - 3736489 + | transglutaminase-like domain-containing protein TERM 2693 3736683 - 3736654 - T 81 -7.7 -4.52345 | overlap 3736655 3736657 AGAGCACCAAAGAAA GCAGCGGCCGGGC TTGC ACCCGACCGCTTG AGACCAAGACCAAAA TERM 2694 3736680 - 3736657 - T 76 -13.8 -3.20639 | overlap 3736655 3736654 GCACCAAAGAAAGCA GCGGCCGGGC TTGC ACCCGACCGC TTGAGACCAAGACCA RPA3313 3736914 - 3736702 - | hypothetical protein degP 3738184 - 3736985 - | putative DegP protease precursor TERM 2695 3737738 - 3737765 + g 70 -12 -3.36327 | opp_overlap 3737730 3737729 GACGAATTCGCCCGA CGCCAGCCGG ACGCCCAG CTGGCTGGCG TTCTGGATGACATGG TERM 2696 3738246 - 3738202 - H 75 -12 -3.61398 | overlap 3738204 GCGTGTCTCGAAGAA CAGCAGGTTGGCCCGACGGA CCGGT TCCGTCGCGCCGGCCAGCTA ATGCGCCAAGTTCCG TERM 2697 3738244 - 3738204 - H 72 -12.4 -3.38812 | overlap 3738202 GTGTCTCGAAGAACA GCAGGTTGGCCCGACGGA CCGGT TCCGTCGCGCCGGCCAGC TAATGCGCCAAGTTC RPA3315 3738485 - 3739159 + | protease TERM 2698 3741151 - 3741115 - g 72 -4.3 -4.48987 | opp_overlap 3741118, overlap 3741117 CGGCTACAAGCAAAA CACCCTCATCCGCCG AATTCAG CGCCGGATGCAGGTT CTTCAGATCGAGTCG TERM 2699 3741823 - 3741805 - g 81 -5.2 -4.83615 | CATCGTCGACAAAAA GCACCGCA TCC TGCAACGC CGAGACGGCGCCAGA TERM 2700 3742175 - 3742150 - g 77 -3.1 -4.89477 | opp_overlap 3742172 3742173, overlap 3742168 GGTTGAAGAAGAAAA CCTGAGACTCG AAGG CAAGCCGCCGG TCGACCTCGTCGTCG RPA3316 3740366 - 3743506 + | chemotaxis cheB/cheR fusion protein RPA3317 3743972 - 3743574 - | hypothetical protein RPA3318 3744712 - 3743984 - | Crp/FNR family transcriptional regulator TERM 2701 3744663 - 3744639 - G 70 -6.3 -4.16842 | GCCACTCCGAACAAA GCCCGCTGATC TGA GATCGGCAGCC CCCCCCGAAACAGCA RPA3319 3744910 - 3745329 + | hypothetical protein RPA3320 3745839 - 3746519 + | hypothetical protein algC 3748143 - 3746647 - | phosphomannomutase AlgC manC 3749626 - 3748190 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase RPA3323 3751635 - 3749863 - | hypothetical protein RPA3324 3752846 - 3751977 - | hypothetical protein TERM 2702 3753547 - 3753513 - H 79 -8.1 -4.37711 | gap 2, opp_overlap 3753521, overlap 3753515 3753521 GGACGAAAGCGAAAA TGGCAAAATTCGGCCAC GAC GTGACCGAA-TTTGC-A CGGGAATCTGGTCAG TERM 2703 3753541 - 3753521 - H 91 -11.9 -4.28049 | opp_overlap 3753521, overlap 3753515 3753513 GCGAAAATGGCAAAA TTCGGCCAC GAC GTGACCGAA TTTGCACGGGAATCT TERM 2704 3753734 - 3753750 + G 71 -13.7 -2.87132 | TCTCGGAGCAGGCGC GCAGCCG GCT CGGCTGC TGTATGGCACCCCAA RPA3325 3753666 - 3754148 + | hypothetical protein RPA3326 3754537 - 3755022 + | hypothetical protein RPA3327 3755308 - 3755592 + | hypothetical protein RPA3328 3756044 - 3755628 - | XRE family transcriptional regulator TERM 2705 3756412 - 3756387 - R 100 -20.5 -4.63218 | opp_overlap 3756407 GCCGCCTCAAGAAAA GACGGCGGGAC CGAG GTCCCGCCGTC CGAAGGCATCTTAGT RPA3329 3758174 - 3756423 - | hypothetical protein TERM 2706 3759069 - 3759057 - g 72 -5.5 -4.30576 | TCGCCAGCAGCAAAA GCTCG GTC CGAAC TAACGATAAGATCCA RPA3330 3758733 - 3759116 + | hypothetical protein RPA3331 3759101 - 3759631 + | hypothetical protein RPA3332 3759664 - 3759948 + | hypothetical protein TERM 2707 3760242 - 3760272 + G 71 -12.6 -3.3095 | gap 1 AACTTCGCGGAGTTC TCGCGC-GCCGTC ACGCAA GGCGGCAGCGCGA TTCTCACCGATGTGT csgG 3760005 - 3760880 + | putative curli production assembly/transport component csgg precursor RPA3334 3761522 - 3761133 - | hypothetical protein RPA3335 3761998 - 3761657 - | hypothetical protein RPA3336 3763271 - 3762564 - | lipopeptide antibiotics iturin a biosynthesis protein RPA3337 3764387 - 3763287 - | hypothetical protein RPA3338 3766768 - 3764459 - | condensation domain-containing protein mcyE 3774813 - 3766765 - | polyketide synthase TERM 2708 3768807 - 3768859 + g 79 -10.8 -3.91402 | gap 1, opp_overlap 3768795, overlap 3768792 3768791 CGACCTCGATCGTGA GGTCGTCGTCGGTTTCGATCATGTT GATG AAGATG-TCGAAATTGACGAAGGCC TTTGGATTTGTATCG TERM 2709 3769172 - 3769145 - G 74 -9.8 -3.76224 | overlap 3769146 TGCCGATCCAGCAAA GCCTGACCGCCC ATCG GGACGGTCAAGA CAACGCGCTCGTTGT TERM 2710 3770507 - 3770483 - G 70 -9.9 -3.72695 | overlap 3770458 AGCGCGTCCATGAAA TCCGCGCGGCC GGC GACCACGCCGA TTGGCATTCCTCCGC TERM 2711 3774547 - 3774534 - G 74 -8.1 -4.26344 | AGATCTCGAGGAAAA TCCGC TGCT GCGGA TCAGTCAAATCCGCT RPA3340 3776749 - 3774836 - | peptide synthetase (fragment) TERM 2712 3776407 - 3776395 - G 70 -6.2 -4.17048 | opp_overlap 3776398 GCTCCGTCAAAACAA GCGC CGGCT GCGC ATCCTGGATGGCGCC TERM 2713 3777370 - 3777404 + G 70 -8.4 -3.91858 | GCTATGGGCAGGCAG CGGACGCAGCGATGTG GGA TACGCCGGCGCGTCCG TTTCTACGATCTGTG TERM 2714 3778093 - 3778114 + G 76 -14.5 -3.21218 | overlap 3778083 CCACGCCGCGGCGCC TCGCGATCG TTCG CGATCGCGA TTACTCATACGGGAT RPA3341 3777237 - 3778376 + | putative acetyltransferase TERM 2715 3780233 - 3780245 + G 73 -9.1 -3.96148 | CATCAACGCGATTGC CTCGC CCA GCGAG TTTCTGATCAAGGAC RPA3342 3778452 - 3780284 + | glycosyl hydrolase mtfB 3780347 - 3781483 + | mannosyltransferase B TERM 2716 3781800 - 3781775 - g 73 -9.1 -3.90112 | gap 1, overlap 3781779 3781798 GGCTCCTCAAGCAAA CGA-ACTCTCCA CGC TGGAGAGCATCG GCGAGCCGAACGCCC TERM 2717 3781795 - 3781779 - g 70 -10.9 -3.61468 | overlap 3781775 CCTCAAGCAAACGAA CTCTCCA CGC TGGAGAG CATCGGCGAGCCGAA RPA3344 3781605 - 3783353 + | oxidoreductase RPA3345 3784790 - 3783348 - | hypothetical protein TERM 2718 3785854 - 3785878 + G 85 -9.9 -4.1822 | overlap 3785849 3785854 GAGCGTCTTTCGCTT GCGCGGCGGCG CTT TGTTGTCGCGC TTTCTTCCACTCAGG TERM 2719 3785854 - 3785865 + G 75 -7.2 -4.31835 | overlap 3785849 3785854 GAGCGTCTTTCGCTT GCGC GGCG GCGC TTTGTTGTCGCGCTT RPA3346 3785284 - 3786384 + | mannosyltransferase TERM 2720 3786600 - 3786628 + G 75 -13.1 -3.44325 | overlap 3786601 ACTGCAATCCGGGAC TTCCCGTGCAGCG CAA CGCTGCGCTGGAG TTACTTCTGGGCGCT RPA3347 3786407 - 3787297 + | putative glycosyltransferase RPA3348 3788894 - 3787401 - | polysaccharide export protein RPA3349 3790172 - 3789036 - | putative exopolysaccharide biosynthesis protein TERM 2721 3789652 - 3789621 - G 84 -7.2 -4.7373 | CGACGCGAGCAAAAA TGGTAGCGCTGCCG GGCG CGGCAACGTCAGCA GCACCCCGAAGACCA TERM 2722 3789847 - 3789810 - G 78 -14.1 -3.61517 | ATGCGTTGTGAATAA CCCCGGTGACAGCACCG TGAC CGACACTGCCACCGTGG TGAGCAACCAATACA TERM 2723 3789923 - 3789897 - G 74 -5.1 -4.56597 | gap 1, overlap 3789899 CCGCTTCTTGAAAAA TCCGGTCA-CCG CTCC CGGCTGGCCGAA ATCGTTCCGATGCAC RPA3350 3790782 - 3791927 + | putative aminotransferase TERM 2724 3792729 - 3792703 - g 71 -3.1 -4.68705 | gap 2, overlap 3792693 3792704 ACAAGGCCAAGAAAA TCCTGACGAATGC CAA GC-TTCG-CAAGA GCGACGAGAGCTTGC RPA3351 3792003 - 3792809 + | glycosyl transferase TERM 2725 3793944 - 3793929 - g 76 -8.2 -4.25104 | TTGTTGGCAGCAAAA GCGCAG GCCA CCGCGC GCAACAGAGGCTAGC RPA3352 3792840 - 3793958 + | glycosyltransferase RPA3353 3794671 - 3793955 - | putative serine/threonine protein phosphatase TERM 2726 3794960 - 3794947 - H 72 -2.5 -4.72556 | CTAAAAACTACAAAA TTTAT ATTC ATAAA CAGTACCTTGGAGTC RPA3354 3794981 - 3795619 + | hypothetical protein RPA3355 3795678 - 3798026 + | putative exopolysaccharide polymerization protein RPA3356 3798083 - 3798739 + | hypothetical protein TERM 2727 3799742 - 3799755 + G 73 -3.7 -4.68645 | CCTTGATCTTCTCTT GGCGC TTTC GGGCC TTTTGATTTTGGCTC RPA3357 3799641 - 3800315 + | putative glycosyltransferase RPA3358 3801039 - 3801755 + | hypothetical protein RPA3359 3803247 - 3801814 - | O-antigen polymerase pssN 3804464 - 3803244 - | putative capsule polysaccharide export outer membrane protein RPA3361 3805215 - 3805466 + | hypothetical protein RPA3362 3805695 - 3805976 + | hypothetical protein RPA3363 3806956 - 3806489 - | hypothetical protein rrm1 3807406 - 3808233 + | RNA methyltransferase TrmH, group 3 TERM 2728 3808249 - 3808279 + T 90 -13.9 -4.07568 | opp_overlap 3808250, overlap 3808250 GGTCCAGAACGCACA ACGCCCGCCCGCA TCTGC TGCGGACGGGCGC TTTTCAGCCGGCAAG TERM 2729 3808250 - 3808278 + T 88 -17.4 -3.04398 | opp_overlap 3808250, overlap 3808249 GTCCAGAACGCACAA CGCCCGCCCGCA TCTGC TGCGGACGGGCG CTTTTCAGCCGGCAA TERM 2730 3808278 - 3808250 - T 100 -19.6 -3.45054 | opp_overlap 3808249 3808250 GTCCAGAACGCACAA CGCCCGCCCGCA TCTGC TGCGGACGGGCG CTTTTCAGCCGGCAA RPA3365 3808806 - 3808306 - | hypothetical protein RPA3366 3809337 - 3808864 - | hypothetical protein TERM 2731 3809525 - 3809581 + r 71 -5.9 -4.36914 | gap 3, overlap 3809527 GGTCTTGTCGATCCG CGGCGGCGCTGCTAGCTGT-CTGC-CCG ATGC CGGCGTAGCACAGC-GGTAGTGCAGCGG TTTTGTAAACCGAAG RPA3367 3810125 - 3809655 - | photopigment and puc activator RPA3368 3810849 - 3810250 - | hypothetical protein RPA3369 3811211 - 3811423 + | hypothetical protein TERM 2732 3811734 - 3811753 + G 91 -16.4 -3.81488 | opp_overlap 3811731 3811729 3811728 GCCAACCAATCACCA CCGGCGCC GCAT GGCGCCGG TTCTGTTTCAGAGCC RPA3370 3811538 - 3812215 + | hypothetical protein TERM 2733 3812332 - 3812313 - T 100 -12.1 -4.56597 | CGGCTGGCGCAAAAA GGCCGGC GCTGAG GCCGGCC TTGAAGCTACGATTC RPA3371 3813103 - 3812381 - | putative outer membrane protein TERM 2734 3813253 - 3813294 + r 74 -5.1 -4.59773 | gap 1, opp_overlap 3813255, overlap 3813255 AGGCCGGCATCAGAT TAGTCGCGGCAGATTGCGAT CCG GTCGGGATCAG-CGCGACAA TTTTTCCAGCTCGGG RPA3372 3813702 - 3813283 - | hypothetical protein TERM 2735 3813782 - 3813734 - R 100 -19.6 -3.53012 | gap 1, overlap 3813716 3813735 3813738 3813739 CGCCGGGCGGCGAAA TCAATCGCCCGCCGTGCCGCG AGGGGAAG CGCGGCGCGGCGGGCG-TTGG GACGGCTGAAGATCA TERM 2736 3813781 - 3813735 - R 100 -23.1 -2.71712 | gap 1, overlap 3813716 3813734 3813738 3813739 GCCGGGCGGCGAAAT CAATCGCCCGCCGTGCCGCG AGGGGAAG CGCGGCGCGGCGGGCG-TTG GGACGGCTGAAGATC TERM 2737 3813779 - 3813738 - R 100 -21.5 -3.51232 | overlap 3813716 3813735 3813734 3813739 GGGCGGCGAAATCAA TCGCCCGCCGTGCCGCG AGGGGAAG CGCGGCGCGGCGGGCGT TGGGACGGCTGAAGA TERM 2738 3813778 - 3813739 - R 100 -25 -2.70525 | overlap 3813716 3813738 3813735 3813734 GGCGGCGAAATCAAT CGCCCGCCGTGCCGCG AGGGGAAG CGCGGCGCGGCGGGCG TTGGGACGGCTGAAG RPA3373 3814091 - 3813795 - | hypothetical protein ppnK 3814236 - 3815222 + | inorganic polyphosphate/ATP-NAD kinase TERM 2739 3815339 - 3815284 - T 71 -8.8 -3.93136 | gap 1, overlap 3815285 ACAGTCATTCACAAA CCCGGCGGTAGCTCGGACGGCTTCAGG CGG CCTGCAGCCGCACCAGCT-CGGCGGCG AATTCGAAGCGAAGC RPA3375 3815749 - 3815306 - | hypothetical protein RPA3376 3819017 - 3815742 - | DNA methyltransferase RPA3377 3820190 - 3819486 - | 3-oxoacyl-acyl carrier protein reductase TERM 2740 3819925 - 3819946 + g 72 -13.7 -3.01791 | gap 1 ATCTCGAGGATCGGC GCGCGCGGCC CGT GGCCG-GCGC TGTTGACCAGCACGT TERM 2741 3820620 - 3820587 - R 91 -18.9 -3.01712 | gap 1 CTTCGTCGCGTAAGA TTCCGGGTTCGCGCGC TTT GCGCGCGC-CCCGGAA GGACTCGGGGAAATG RPA3378 3820844 - 3820668 - | hypothetical protein RPA3379 3821406 - 3821212 - | hypothetical protein TERM 2742 3821925 - 3821906 - g 82 -11.4 -4.11216 | gap 1, opp_overlap 3821897, overlap 3821907 CGCGCATTCGGAAAA GCGCC-GCG TCA CGCTGGCGC GCGATGCCGGCGTCA RPA3380 3821616 - 3822161 + | response regulator receiver (CheY-like protein) TERM 2743 3822524 - 3822475 - g 71 -12.8 -3.29471 | opp_overlap 3822482, overlap 3822476 CGCCCACGACATCAA GGGCGAC-GCCGCCACCTTCGGCT TTCC AGCCGC-GGCGGCGACCGCCGCCA GCCTGTGCCGGATCA TERM 2744 3822523 - 3822476 - g 77 -16.3 -2.57468 | opp_overlap 3822482, overlap 3822475 GCCCACGACATCAAG GGCGAC-GCCGCCACCTTCGGCT TTCC AGCCGC-GGCGGCGACCGCCGCC AGCCTGTGCCGGATC RPA3381 3822179 - 3822769 + | Hpt domain-containing protein RPA3382 3824235 - 3823066 - | hypothetical protein TERM 2745 3823846 - 3823903 + g 73 -13.1 -3.30124 | gap 1, opp_overlap 3823810 GCCGACCTCGGCGAT CGCCGCGCACACCGCGGCGG-GCAGCTC GAA GCGCCGCGCCACCGCGCATTGCACGGCG TTGTCCCCGGTGGCG TERM 2746 3824980 - 3825001 + G 71 -3 -4.62069 | gap 1 GGCTGCGGTGTATAG GTCGGTCGA ATTCA TCG-TCGAC TTTTTCCGCTCGACG RPA3383 3824681 - 3825466 + | taurine transport system permease protein RPA3384 3825463 - 3826494 + | nitrate/sulfonate/bicarbonate ABC transporter periplasmic-binding protein nrtC2 3826491 - 3827327 + | putative nitrate transport system ATP-binding protein TERM 2747 3827354 - 3827325 - f 85 -9.9 -4.26351 | gap 1, overlap 3827328 CAGGAAGTGAAGAAA TAACGGGCGCCGGC TGA GCCGG-GCCCGAAA GATCCGAACCACCCC TERM 2748 3827351 - 3827328 - f 100 -16 -4.2416 | gap 1, overlap 3827325 GAAGTGAAGAAATAA CGGGCGCCGGC TGA GCCGG-GCCCG AAAGATCCGAACCAC RPA3386 3827388 - 3829061 + | amidohydrolase TERM 2749 3829122 - 3829090 - g 81 -11.2 -4.03234 | gap 1, overlap 3829095 CTGTCCGGACACAAA CGGAA-GGTCGGCGC ATCG GCGCCGGCCGTGCCG GGGAGACCGCAGCGG TERM 2750 3829116 - 3829095 - g 75 -12.9 -3.35695 | overlap 3829090 CGGACACAAACGGAA GGTCGGCGC ATCG GCGCCGGCC GTGCCGGGGAGACCG RPA3387 3829071 - 3830087 + | LysR family transcriptional regulator RPA3388 3831134 - 3830094 - | hypothetical protein TERM 2751 3831820 - 3831807 - g 77 -5.2 -4.59414 | overlap 3831809 CTACAACAAGGAAAA GGGC TCCAGC GCCC AGGGCAGCAAGCAGC RPA3389 3831331 - 3832029 + | hypothetical protein hisI 3832494 - 3832039 - | phosphoribosyl-AMP cyclohydrolase gch1 3833212 - 3832523 - | GTP cyclohydrolase I RPA3392 3833480 - 3833932 + | nifU-like protein TERM 2752 3834032 - 3833976 - T 73 -10.8 -3.57792 | gap 2, opp_overlap 3833980, overlap 3833977 3833980 CCAGCGATCTCCAAA CCCACG-CGTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTCGACGTTGT GAAAAACCACGCACA TERM 2753 3834031 - 3833977 - T 75 -14.3 -2.74461 | gap 2, opp_overlap 3833980, overlap 3833976 3833980 CAGCGATCTCCAAAC CCACG-CGTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTCGACGTTG TGAAAAACCACGCAC TERM 2754 3833980 - 3834028 + T 82 -14.6 -3.28712 | gap 2, opp_overlap 3833977 3833976 3833980 CGATCTCCAAACCCA CG-CGTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTCGACG TTGTGAAAAACCACG TERM 2755 3834028 - 3833980 - T 74 -14.6 -2.64803 | gap 2, opp_overlap 3833980, overlap 3833977 3833976 CGATCTCCAAACCCA CG-CGTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTCGACG TTGTGAAAAACCACG RPA3393 3835005 - 3834115 - | hypothetical protein RPA3394 3835177 - 3835635 + | hypothetical protein RPA3395 3836413 - 3835622 - | hypothetical protein RPA3396 3837653 - 3836526 - | hypothetical protein RPA3397 3838113 - 3837655 - | hypothetical protein RPA3398 3839531 - 3838266 - | arsenite permease TERM 2756 3839136 - 3839098 - G 72 -7.3 -4.29106 | gap 1, overlap 3839100 GCGCAGACGAACAAA TACGGCAGCG-GTGCAGC GCCC GCCGCGCGCGTCGCCGCA TAGACCGCCGGTGTC TERM 2757 3839246 - 3839226 - G 70 -10.4 -3.75738 | gap 1 CACCAGCAGGAACAA GCGCTGCGG CGAA CCGC-GCGC GTGCTCGACGGCGTA cspA4 3839779 - 3840006 + | cold shock DNA binding protein TERM 2758 3840050 - 3840076 + F 93 -14.5 -4.08216 | GAAACGGCAGATGGG CCCGTTCGATC TTAGC GATCGAGCGGG TTTTGCCGCGCGTCC RPA3400 3840107 - 3840355 + | hypothetical protein TERM 2759 3840445 - 3840462 + G 75 -9.1 -4.13767 | gap 1, opp_overlap 3840445, overlap 3840445 GCGACATTCACAGCA CC-GGCGG TCG CCGCCAGG TTTTCGGCTCGCGCG RPA3401 3840399 - 3840596 + | hypothetical protein RPA3402 3841008 - 3840586 - | hypothetical protein RPA3403 3841645 - 3841013 - | TetR family transcriptional regulator RPA3404 3841743 - 3842393 + | putative O-methyltransferase RPA3405 3843873 - 3842755 - | transporter thrS 3844183 - 3846159 + | threonyl-tRNA synthetase TERM 2760 3846306 - 3846317 + T 86 -7.2 -4.7254 | overlap 3846287 3846286 TGCCCGGGCTGGTCC CGGG CATT CCCG TTTTTGGTAGGCCGT RPA3407 3847019 - 3846441 - | hypothetical protein RPA3408 3847356 - 3847865 + | nitroreductase family protein RPA3409 3849791 - 3847917 - | metal-dependent hydrolase RPA3410 3852360 - 3849886 - | diguanylate cyclase/phosphodiesterase TERM 2761 3850997 - 3850961 - G 77 -16.5 -2.66316 | overlap 3850958 CGCGCCACCAGATCA CCGTCGCCGATCTGCTG CCG CAGCCGCTCGGCGACGC ATTGCAGCAGCCGGT RPA3411 3853734 - 3852571 - | hypothetical protein TERM 2762 3853582 - 3853525 - G 79 -13.4 -3.62597 | overlap 3853572 CCGATCGCTGAACAA TTGCGCGGCGGCGGGCTG-AGTGAGCGC CAGC GCGCACACCACAACCAGC-GCCGCACGA GCGGCCCCCCACGGC RPA3412 3853863 - 3854894 + | patatin-like phospholipase domain-containing protein RPA3413 3856241 - 3855126 - | hypothetical protein TERM 2763 3856226 - 3856254 + g 85 -13.1 -4.13767 | overlap 3856227 ACACCCACAGTCGAA TGGCACGCCGC GTCATCG GCGGCGTGCCC TTTTCAGGTCGAACG TERM 2764 3856227 - 3856253 + g 81 -16.6 -3.08046 | overlap 3856226 CACCCACAGTCGAAT GGCACGCCGC GTCATCG GCGGCGTGCC CTTTTCAGGTCGAAC RPA3414 3858531 - 3856270 - | putative hydroxamate-type ferrisiderophore receptor TERM 2765 3858599 - 3858577 - H 81 -7.6 -4.41348 | overlap 3858573 3858579 CGGGCGGGAAATAAA CGGGACGGGA CCG TCCTGTCCAG ACAGATTGCCAAGCG TERM 2766 3859144 - 3859169 + G 77 -11.1 -3.85698 | gap 1, opp_overlap 3859140 3859139 AGGCGCAGAAGGCCG GCGC-CCTCGCC CGC GGCGACGCGCGC TTTCTCGCCAGCCAA RPA3415 3858681 - 3859316 + | TetR family transcriptional regulator RPA3416 3859766 - 3859338 - | CBS domain-containing protein RPA3417 3860774 - 3860004 - | rhomboid-like protein TERM 2767 3860921 - 3860897 - H 100 -14.3 -4.3208 | CCCCAGAACGGAAAA GGGAGGGCCCT GAG AAAGCCCTCCC CCGGTCCGTGCCGGC RPA3418 3861259 - 3861828 + | hypothetical protein RPA3419 3862562 - 3861798 - | Crp/FNR family transcriptional regulator TERM 2768 3863030 - 3863051 + H 70 -7.9 -4.08767 | ACCCCAAAAGCCAGC CGGCGACCC TCGA GCGTCGTCG TTTTCAGCGGGTGAA TERM 2769 3863280 - 3863250 - g 70 -11.8 -3.37796 | TCGTATCATCGATAA CGGCTTTGCGATGA CTG TCGCCGCAACGCCG CGCAAGCGCGACAAG RPA3420 3863062 - 3863613 + | type IV pilus assembly PilZ RPA3421 3863945 - 3864565 + | transglutaminase-like cysteine peptidase, BTLCP TERM 2770 3864631 - 3864670 + T 90 -13.5 -4.08945 | overlap 3864655 CCGTCCCAGACCGGA TCGTGCGCGGCCAGCCT CCCCCA AGGCTGGCCGCACCCCA TTTTGCGGCGGTCCT RPA3422 3865290 - 3864703 - | MarR family transcriptional regulator RPA3423 3865814 - 3867313 + | hypothetical protein TERM 2771 3867344 - 3867379 + F 85 -6.2 -5.03145 | gap 2, opp_overlap 3867338 3867349, overlap 3867349 ACTTGTAAACCTCCA AGGA--ACCTCCGGCG ATGCCC CGCCGGAGGTTTTCCC TTTTTTGGAGGCTTC TERM 2772 3867372 - 3867349 - f 88 -16 -3.36581 | opp_overlap 3867344 3867349, overlap 3867338 TAAACCTCCAAGGAA CCTCCGGCGA TGCC CCGCCGGAGG TTTTCCCTTTTTTGG TERM 2773 3867349 - 3867372 + F 100 -15.3 -4.5366 | opp_overlap 3867338 3867349, overlap 3867344 TAAACCTCCAAGGAA CCTCCGGCG ATGCCC CGCCGGAGG TTTTCCCTTTTTTGG RPA3424 3867737 - 3867904 + | hypothetical protein TERM 2774 3867930 - 3867910 - T 74 -10.4 -3.76759 | gap 1 AGGAACGTGACGAAA GCCGGCGGC AAGG GCCG-CGGC TCCGCTCACCCGATC RPA3425 3868466 - 3867936 - | hexapeptide repeat-containing transferase RPA3426 3868858 - 3868526 - | hypothetical protein RPA3427 3869049 - 3869756 + | hypothetical protein RPA3428 3870003 - 3869773 - | hypothetical protein cysE2 3870987 - 3870160 - | serine O-acetyltransferase TERM 2775 3871069 - 3871017 - R 76 -9 -4.07568 | gap 1, opp_overlap 3871041 3871042, overlap 3871024 3871027 TCGGGTCGCTCAAAA CACTATAC-CACGTCAGCCGCGGCG CTGT CGCGGCGCCTGACGTGTGCGCCGCG GCACTTTCCAAGACT TERM 2776 3871061 - 3871024 - R 81 -15.5 -3.01785 | opp_overlap 3871041 3871042, overlap 3871017 3871027 GCTCAAAACACTATA CCACGTCAGCCGCGGCG CTGT CGCGGCGCCTGACGTGT GCGCCGCGGCACTTT TERM 2777 3871058 - 3871027 - R 78 -15.8 -2.72761 | opp_overlap 3871041 3871042, overlap 3871024 3871017 CAAAACACTATACCA CGTCAGCCGCGGCG CTGT CGCGGCGCCTGACG TGTGCGCCGCGGCAC TERM 2778 3871041 - 3871073 + r 70 -9.8 -3.54919 | opp_overlap 3871027 3871024 3871017, overlap 3871042 ACGTCAGCCGCGGCG CTGTCGCGGCGC CTGACGTGT GCGCCGCGGCAC TTTCCAAGACTCGTT RPA3430 3871963 - 3871208 - | alpha/beta hydrolase fold RPA3431 3873281 - 3872133 - | hypothetical protein RPA3432 3873487 - 3873732 + | hypothetical protein TERM 2779 3874344 - 3874360 + G 70 -10.1 -3.64703 | overlap 3874355 GCCGGATGGGGAGAG GCTGCGC GGA GTGCAGC TTTGGCTGGGGCCGG RPA3433 3873751 - 3874944 + | salicylate 1-monooxygenase TERM 2780 3875456 - 3875481 + G 75 -6.7 -4.41616 | overlap 3875460 TGACCGCAGTGTGGC CGGCGGTGGCG TCCC CGCAACCCTCG TTTGTTTCGACGCGT RPA3434 3875337 - 3875981 + | universal stress protein RPA3435 3876078 - 3876938 + | glycosyl transferase family protein TERM 2781 3877073 - 3877112 + G 77 -12.8 -3.67976 | opp_overlap 3877043 3877042 GCTACGAACCGCTGC CGATGCTCGCCGACTACG CGGT CGCGATCCGCGAGCATCG TTTCGACTTGCTGGA RPA3436 3876964 - 3877473 + | GCN5-related N-acetyltransferase RPA3437 3878064 - 3879167 + | hypothetical protein RPA3438 3879502 - 3879239 - | hypothetical protein TERM 2782 3879993 - 3880021 + H 73 -11 -3.59979 | opp_overlap 3879982 CAAAGCGGGGTTGCA GCGATGCGG-CGGC TTC GCCGTCCGCG-CGC TTTGACATCGCCCCG TERM 2783 3880078 - 3880054 - H 71 -12.7 -3.01712 | opp_overlap 3880059 TTGTCGGCTGGAATA CGCACGGCGCC TGC GGCGTCGGGCG CGGCGGCCTCTCTCA TERM 2784 3880729 - 3880758 + G 72 -6.9 -4.16842 | opp_overlap 3880696, overlap 3880730 TGGCGAGATCGCGAT CCGGCCCGGGCCG GCGA TGGCCGGTGCCGA TTTCTTCGACATCAC RPA3439 3880205 - 3881392 + | putative hydrolase TERM 2785 3881704 - 3881760 + G 70 -12 -3.48276 | gap 1, opp_overlap 3881667, overlap 3881726 TGCCGATCACGCCGC TGACGCCGGCCACG-GCCGATGCGCCG CCCG CCGCGCGGCTGCGCGAAGCCGGCGGCA TTCTGTGGAGCAAAA TERM 2786 3881726 - 3881759 + G 72 -15.1 -2.68823 | overlap 3881704 GGCCACGGCCGATGC GCCGCCCGCCGCGCG GCTG CGCGAAGCCGGCGGC ATTCTGTGGAGCAAA TERM 2787 3881804 - 3881776 - g 70 -6.1 -4.25104 | gap 2, opp_overlap 3881780 3881782 TTCTGTGGAGCAAAA CGAC-G-ATGCCG GATTT CGGCATGCTGTCG TCGGGGCTGTCGAGC TERM 2788 3881883 - 3881861 - g 77 -14.1 -3.36327 | GGACGTGACGCAGAA CACCGGCGG CTCCT CCGCCGGCG CCGGCGCCGCGGGCG TERM 2789 3882538 - 3882564 + G 73 -12.2 -3.37612 | TGATCTCGCCGGTGG CGCCGGTGGTGA GCT TCGCCGCCGACG TTGCTTCGCCTTGGA RPA3440 3881385 - 3882800 + | amidase TERM 2790 3883751 - 3883741 - g 72 -8.2 -4.07568 | overlap 3883718 CTCGTTCCTGGAAAA GCGC CCG GCGC AGTTCAAGAACAAGG RPA3441 3882893 - 3883822 + | enoyl-CoA hydratase TERM 2791 3883848 - 3883823 - T 77 -12.5 -3.54382 | gap 1, opp_overlap 3883820, overlap 3883819 3883824 CGCGAATACAAGTAA GCGCGGGCGCCG AAC CGGCGCCCTC-C TAATCGTTCAGGATT RPA3442 3884624 - 3883848 - | putative cyclase RPA3443 3885640 - 3884651 - | isomerase/decarboxylase TERM 2792 3884680 - 3884691 + g 72 -5.8 -4.42788 | GCTCGACCTTGTTTT TCGG GATA CCGA TTTTCTCGACTTCGA TERM 2793 3885712 - 3885702 - H 76 -8.2 -4.10791 | overlap 3885703 AATATCGATAAACAA GCCG ACC CGGC TGCCGCGTGCGAAAA RPA3444 3885768 - 3886478 + | GntR family transcriptional regulator RPA3445 3888224 - 3886503 - | AMP-dependent synthetase and ligase RPA3446 3889272 - 3888385 - | 3-hydroxyisobutyrate dehydrogenase RPA3447 3890379 - 3889306 - | enoyl-CoA hydratase TERM 2794 3889968 - 3889945 - G 73 -3.8 -4.59109 | gap 1, opp_overlap 3889946, overlap 3889946 3889947 GACATCGGGGAAAAA GCCGATGCCGA CTT CCGGCATTG-C GATCTTGGTCTTGTC RPA3448 3891533 - 3890376 - | acyl-CoA dehydrogenase RPA3449 3891949 - 3891530 - | PilT protein, N-terminal RPA3450 3893724 - 3892228 - | methylmalonate-semialdehyde dehydrogenase TERM 2795 3893906 - 3893926 + r 78 -6.8 -4.66833 | gap 1, overlap 3893896 3893907 TGCACGGCCGATCGT G-CCGCGGC CTTG GCTGCGGTC TTTTTCGGCTTGGCC TERM 2796 3893907 - 3893924 + r 76 -10.5 -3.94933 | overlap 3893896 3893906 GCACGGCCGATCGTG CCGCGGC CTTG GCTGCGG TCTTTTTCGGCTTGG RPA3451 3894552 - 3893884 - | TetR family transcriptional regulator RPA3452 3895201 - 3894626 - | phenylacetic acid degradation-related protein RPA3453 3895343 - 3896113 + | enoyl-CoA hydratase RPA3454 3896238 - 3897524 + | MFS family transporter RPA3455 3899132 - 3897573 - | methylmalonyl-CoA decarboxylase alpha chain RPA3457 3900286 - 3900507 + | biotin/lipoyl attachment protein TERM 2797 3900675 - 3900656 - f 79 -8.6 -4.30719 | gap 1, opp_overlap 3900660, overlap 3900660 TCGCCCGATAACAAA GCAATCCGC AAA GCGGA-TGC GTTCGGGAGAGAAAC TERM 2798 3900672 - 3900660 - f 71 -9.1 -3.72784 | opp_overlap 3900660, overlap 3900656 CCGATAACAAAGCAA TCCGC AAA GCGGA TGCGTTCGGGAGAGA RPA3458 3900691 - 3901851 + | TRAP dicarboxylate family transporter DctP subunit TERM 2799 3903893 - 3903923 + G 74 -12.6 -3.55563 | gap 1, overlap 3903894 3903904 TGGCGATCGCGTTGC TGCTGGTCCGCCG GGGCGA CGGCGG-CCAGCG TTTGGCGCGTCCCGT RPA3459 3901879 - 3903945 + | TRAP dicarboxylate family transporter DctM/Q subunit TERM 2800 3903993 - 3903948 - f 91 -18.9 -3.01712 | opp_overlap 3903946 3903945 3903943 3903948 TCCCGTCGTGTAACA CTCCCCGCTGCGGCGCCGGTA TCAG CACCGGCGCCGCAGCGGCATC TCGGTTGATTTCCCT TERM 2801 3903948 - 3903993 + F 80 -16 -2.63688 | opp_overlap 3903948, overlap 3903946 3903945 3903943 TCCCGTCGTGTAACA CTCCCCGCTGCGGCGCCGGT ATCAGC ACCGGCGCCGCAGCGGCATC TCGGTTGATTTCCCT RPA3460 3904066 - 3904620 + | hypothetical protein TERM 2802 3904640 - 3904665 + T 93 -14.7 -3.99324 | CCGCGACGTCCGAGC GCGGCGGGC GCTGAATG GCCCGCCGC TTTCTGATGATCAGC RPA3461 3905041 - 3904676 - | hypothetical protein RPA3462 3906252 - 3905038 - | thiolase RPA3463 3907573 - 3906356 - | hypothetical protein RPA3464 3907766 - 3908650 + | hypothetical protein RPA3465 3910396 - 3908870 - | putative long-chain-fatty-acid CoA ligase TERM 2803 3910240 - 3910226 - G 75 -11.4 -3.62775 | overlap 3910227 ATTATGTGCGAACAA GGCGAC CCG GTCGCC GGGCGCAATGCCGTA RPA3466 3911586 - 3910417 - | acetyl-CoA acetyltransferase RPA3467 3912899 - 3911835 - | NAD-dependent epimerase/dehydratase RPA3468 3913959 - 3913033 - | putative permease protein of sugar ABC transporter RPA3469 3914905 - 3913952 - | binding-protein-dependent transport systems inner membrane component TERM 2804 3915111 - 3915082 - R 93 -17.1 -3.53444 | TCATTCCGGTCTAAA CGGGAGGCCGATG CGCA CGCCGGCCTCCCG GTCTCAAAGCCTCAC RPA3470 3916448 - 3915123 - | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor TERM 2805 3915297 - 3915315 + g 70 -2.3 -4.62069 | overlap 3915299 CGAGGCGGTGCGGGC GACGTCG CGATA CGGCGTG TTTTTCGGGTCCGCG RPA3471 3917589 - 3916525 - | ABC transporter ATP-binding protein ilvD1 3917826 - 3919634 + | dihydroxy-acid dehydratase TERM 2806 3919752 - 3919717 - f 71 -9.7 -3.78778 | gap 1 TCATCACACGAAGAA CGATG-GATGGCCGGG TCAAG CCCGGCCATGACGTCG TCAGGAGGAAACAGC ucpA 3919768 - 3920502 + | short-chain dehydrogenase/reductase SDR TERM 2807 3920532 - 3920507 - f 74 -12.5 -3.34344 | GGACGTTGTAACTAA CCTCTCCCCGC AACA GCGGAGCGAGG GAGCGCGCTTCCGGC fabG4 3920586 - 3921335 + | short-chain dehydrogenase/reductase SDR RPA3475 3922367 - 3921408 - | putative transposase RPA3476 3923591 - 3922797 - | energy transducer TonB exbD5 3924145 - 3923696 - | exbD, uptake of enterochelin; tonB-dependent uptake of B colicins exbB5 3924853 - 3924149 - | exbB, uptake of enterochelin; tonB-dependent uptake of B colicins RPA3479 3925746 - 3925057 - | putative hydroxylase TERM 2808 3925258 - 3925226 - G 100 -7.5 -5.28176 | overlap 3925228 3925229 TGCAGCCAGAAAAAA GACGCCACCCGCGCG CCG CGCGTGACCGGAGTC ACCATGTGCAGGCTG TERM 2809 3925252 - 3925228 - G 74 -7.7 -4.2748 | overlap 3925226 3925229 CAGCCAGAAAAAAGA CGCCACCCGCG CGC CGCGCGTGACC GGAGTCACCATGTGC fiu 3927973 - 3925772 - | putative outer membrane receptor for iron transport TERM 2810 3927674 - 3927698 + g 82 -12.1 -3.9644 | GCCGGCGGTGGAGCG CGCCACTTCGC GCA GCGAGGTCGCG TTCTTGTCTTCGAGC RPA3481 3928679 - 3928437 - | hypothetical protein TERM 2811 3929736 - 3929709 - g 73 -14.2 -3.1247 | gap 1, opp_overlap 3929697 3929695 3929729 ATCGCGCAGATCGAA CCGATCGCGGTGA TCT TCACCGCG-CCGG AAGAGCGCGTGTTCG RPA3482 3929016 - 3930239 + | hypothetical protein RPA3483 3930242 - 3933379 + | RND efflux transporter RPA3484 3934063 - 3933422 - | PilT protein, N-terminal TERM 2812 3934304 - 3934249 - R 74 -13.3 -3.36878 | gap 3, overlap 3934251 CCGACGCAGCTAGAA GACCCGCACACCCGAGGCGCGTCGCGAG CCA CTCACGCCGCGCC-CG-GCGC-CGTGTC GAGTGTGCCCCGTGC TERM 2813 3934307 - 3934251 - R 74 -13.1 -3.254 | gap 4, overlap 3934249 GACGCAGCTAGAAGA CCCG-CAC-AC-CCGAGGCGCGTCGCGAG CCA CTCACGCCGCGCC-CGGCGCCGTGTCGAG TGTGCCCCGTGCATC RPA3485 3935867 - 3934674 - | putative racemase RPA3486 3937188 - 3935977 - | putative branched-chain amino acid transport system substrate-binding protein RPA3487 3938051 - 3937437 - | hypothetical protein TERM 2814 3937993 - 3938041 + g 72 -11.7 -3.58533 | gap 3, opp_overlap 3937993, overlap 3937994 3938036 3938037 TGGCTGCGGAAGCGA TAGC-CG-ACCGCGCC-GCCGACG AAAT CGACGGCAGGCGCGGTCCGGGCCG TTTCGGCCATTGTGC RPA3488 3939562 - 3938057 - | peptidase S1C, Do TERM 2815 3939618 - 3939596 - R 76 -6.3 -4.41348 | gap 1, overlap 3939613 CGTGCGCGAAAGAAA GCGCAGTCGC GTGA AC-ACTGCGC CCGATCCTGGGACCG RPA3489 3939977 - 3939777 - | hypothetical protein TERM 2816 3940198 - 3940177 - R 100 -17.3 -4.55128 | opp_overlap 3940172 AGGCCGAAAGCAAAA CGGGCCGCT TGTC AGCGGCCCG TTGCAGTGTCGTGGT hflC 3941146 - 3940220 - | HflC protein hflK 3942294 - 3941143 - | HflK protein dyr 3942981 - 3942439 - | dihydrofolate reductase TERM 2817 3942695 - 3942670 - G 77 -13.3 -3.53224 | gap 1, opp_overlap 3942668 GATCTCGGTGGCAAA TCGC-CGCAGCG CAT CGCCGCGCGCGA CCTGTTCGGCCGCAG thyA 3943772 - 3942978 - | thymidylate synthase RPA3494 3944951 - 3943944 - | TctC subunit of the tripartite tricarboxylate transport(TTT) family RPA3495 3946567 - 3945053 - | hypothetical protein TERM 2818 3945671 - 3945710 + g 77 -10.8 -3.7941 | gap 1 CGCAGCGACGCCTTC GATCGCGCCGCGGCC AAACCGTTTCG GGTCGCG-CGCGATC TTCTTCTCCAGCGTG TERM 2819 3945821 - 3945791 - G 76 -14.7 -3.16881 | gap 1 GAGGGAGCCGAGCAA CG-TGCCGCGGCCG ATCG CGGGCGCGGCATCG CGCAGATCCTTCCGG RPA3496 3947078 - 3946578 - | TctB subunit of the tripartite tricarboxylate transport(TTT) family TERM 2820 3946777 - 3946734 - G 89 -11.1 -4.25074 | CAGGAAACTCGAAAA CGT-CGCGATGACGAGGCCGA GCGG CCGGA-TCGTCACCGCGAACG ACAGGATCGCGAGGC RPA3497 3947681 - 3947151 - | chromate transporter RPA3498 3948274 - 3947678 - | chromate transporter TERM 2821 3949472 - 3949522 + G 72 -11.7 -3.53224 | gap 1, opp_overlap 3949459, overlap 3949472 CAGCGCGCCGTCCGA C-GACGAGCCGCCGCGCTCCGGCG AAGG TGCCGAAGTGGTGCGGCTCGACCG TTTCCGCAAGAAGTA RPA3499 3949002 - 3949538 + | hypothetical protein fumC 3949644 - 3951077 + | fumarate hydratase RPA3501 3951527 - 3951805 + | hypothetical protein RPA3502 3955641 - 3951826 - | hypothetical protein TERM 2822 3952143 - 3952160 + g 75 -9.1 -4.08394 | gap 1 GAGCATTTGGCTGCG GCGCAGCC TCG GGC-GCGC TTTTGGGCACGGTCT TERM 2823 3955772 - 3955731 - R 71 -13.8 -2.52543 | opp_overlap 3955731 3955733, overlap 3955717 3955737 ACTGTGGCGAACTCA CAGCAACTTCAAGCGGCG GATTCA CGCCGTCCAAAGTTGCTG TGGTTCAAACCCCTT RPA3503 3957240 - 3955777 - | putative D-lactate dehydrogenase, oxidoreductase TERM 2824 3956944 - 3956974 + g 75 -13.3 -3.40403 | gap 1 GTGGCCTTCGAGCGA CGTGCCGGTG-CCG AACG CGATCACCGGCACG TTGTGCTGCGCGCAG TERM 2825 3957223 - 3957213 - G 77 -3.2 -4.91109 | overlap 3957214 GGCCCACGACAAAAA CTCC TTC GGAA CGGGGCGACCGTGGC TERM 2826 3957525 - 3957547 + G 83 -14.8 -3.68351 | GCGTGAGATCCATCT CGGCGACCCG GTG CGGGTCGCGG TTTACATCGTCGAGG TERM 2827 3957660 - 3957639 - g 72 -8.8 -4.09685 | GGCGACTTCGGAAAA CATGTCGA TGCATG TCGACATG GCGAGCCGCAAAGTG RPA3504 3957325 - 3957804 + | thioesterase superfamily protein RPA3505 3957974 - 3957801 - | hypothetical protein TERM 2828 3958006 - 3958037 + H 75 -11.6 -3.59979 | gap 1 CGCTTCCGGCATCCG CTGGCGGCTGCCT GTCGGTG AGGC-GCCGCCGG TTTCGACTGCGCCGC TERM 2829 3959198 - 3959151 - g 81 -12.1 -3.79113 | gap 3, overlap 3959154 ATCTCTTCACAAGAA GATG-GATCACCGGGTCTCGCCGC TTC GCGGCG-G-CCCGGTGATGACGTC GAGACGAGTGGCAAC TERM 2830 3960521 - 3960491 - g 75 -14 -3.28712 | opp_overlap 3960483 GTCGCGGTTCGACAA CGTCGAGTCGTTCG GCT CGAGCTACTCGACG CCGGGCTGGCAGCGC uvrD 3958287 - 3960833 + | UvrD/REP helicase RPA3507 3960833 - 3961117 + | hypothetical protein TERM 2831 3961174 - 3961151 - f 84 -16 -3.06183 | gap 1 GTCATTGCGAGCCAA CGGGTCGGCGC GCA GCGCCG-CCCG ATGACAGGCGCCGCG RPA3508 3961413 - 3962333 + | ATP-binding component of ABC transporter RPA3509 3962336 - 3963097 + | hypothetical protein TERM 2832 3963117 - 3963149 + T 86 -17.8 -2.60615 | opp_overlap 3963122, overlap 3963122 TGATCGAGTGAAAAC AAAAAGGCGCGGCC TGATT GGCCGCGCCTTTTG ATGTTTCAGGACGAT TERM 2833 3963122 - 3963144 + T 100 -17.7 -4.49756 | opp_overlap 3963122, overlap 3963117 GAGTGAAAACAAAAA GGCGCGGCC TGATT GGCCGCGCC TTTTGATGTTTCAGG TERM 2834 3963144 - 3963122 - T 100 -17.7 -5.48213 | opp_overlap 3963122 3963117 GAGTGAAAACAAAAA GGCGCGGCC TGATT GGCCGCGCC TTTTGATGTTTCAGG RPA3510 3963516 - 3963169 - | hypothetical protein RPA3511 3963779 - 3964549 + | ErfK/YbiS/YcfS/YnhG TERM 2835 3964599 - 3964576 - T 84 -16.7 -3.06796 | opp_overlap 3964576 GTTGATCCGATCGAA CGCGCGGCC TCCACC GGCCGCGCG TTTTGTTTTGCCTAG TERM 2836 3964576 - 3964599 + T 100 -16.7 -5.10933 | opp_overlap 3964576 GTTGATCCGATCGAA CGCGCGGCC TCCACC GGCCGCGCG TTTTGTTTTGCCTAG RPA3512 3966761 - 3964611 - | hypothetical protein RPA3513 3966889 - 3968661 + | FAD dependent oxidoreductase RPA3514 3969431 - 3970366 + | ribosomal L11 methyltransferase RPA3515 3970781 - 3972610 + | peptidase M24 TERM 2837 3972930 - 3972895 - f 76 -5.5 -4.59773 | gap 2, overlap 3972896 CCTTATGCCGAAAAA CCGCCTGTTAGCGCTGC CCCG GCAG-GCTA-CAGTCGA GCCACCAGCTCACAT TERM 2838 3973625 - 3973584 - g 78 -14.4 -3.53012 | gap 1, opp_overlap 3973603, overlap 3973587 TGGCGCTGCCGGAAA CG-AGCCGCCGCAGCACGC CCGCC GCGCAGCGCGGCGGCTTCG GCACCGACCTGCGCA TERM 2839 3973621 - 3973587 - g 73 -14.9 -2.90496 | opp_overlap 3973603, overlap 3973584 CGCTGCCGGAAACGA GCCGCCGCAGCACGC CCGCC GCGCAGCGCGGCGGC TTCGGCACCGACCTG RPA3516 3972983 - 3974269 + | MFS family efflux pump TERM 2840 3974434 - 3974386 - T 74 -14.8 -2.56596 | opp_overlap 3974412 3974413 3974415, overlap 3974360 3974382 3974413 3974415 GCGCTCACGAAGTGA GCGAACCCGGAATCTCGA TCGACAGAACACC TGGAGATTCCGGGTTCGC GCGTTCCGCGCGCCC dnlJ 3976541 - 3974463 - | DNA ligase RPA3518 3976757 - 3977044 + | excinuclease ABC subunit C TERM 2841 3977140 - 3977174 + T 83 -16.5 -2.88544 | gap 1 CCCCTCAGCGAGTCA TTCCGGG-GCGCGAGC GTAA GCTCGCGAACCCGGAA TCTCTGCCACTGGGA recN 3978884 - 3977199 - | DNA repair protein RecN RPA3520 3979805 - 3978897 - | putative lipoprotein lpxC 3981087 - 3980032 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 2842 3980791 - 3980833 + g 71 -12.6 -3.26471 | GTCGCTGTCGCCGAG GACGGTGGCCAGCTCGGTGG CGA CCACCGACTTGGACGTCGCC TTGATCTCGCGATCG TERM 2843 3980901 - 3980882 - G 95 -6.4 -5.35224 | CGGACAAAAAGAAAA CCCGCA TCGATATC TGCGGG TCCCAGCGTCAGAGT TERM 2844 3981312 - 3981288 - R 100 -20.7 -5.24129 | GCTTGCCACAAAAAA GGGCCCCGGCG GAT CGCCGAGGCCC TGAGCATCGTCAGAT ftsZ 3983119 - 3981341 - | cell division protein FtsZ TERM 2845 3982060 - 3982089 + g 70 -13.6 -3.00525 | overlap 3982054 GCTGATTGTCGGCCC GCAGCTTGGCTG TCAGCT CAGCCAAGCGGC TATCGTTTCCCACCG ftsA 3984535 - 3983213 - | cell division protein FtsA TERM 2846 3984263 - 3984290 + g 70 -12 -3.36492 | gap 1 CTTGGCCATGCGTTC GGCGA-GCGCCAC CGC GTGGCGGATCGCC TTCTCGCATTCGGCC ftsQ 3985521 - 3984532 - | putative cell division protein FtsQ ddlA 3986829 - 3985840 - | putative D-alanyl-D-alanine ligase A TERM 2847 3986029 - 3986002 - G 72 -5.4 -4.30719 | CTTGCCGACAATAAA GTCGGAGCGCGA GTAG CCGCGGCACGAC ATCACCCGGTGCGCC TERM 2848 3986896 - 3986871 - R 78 -5.3 -4.68103 | gap 1, opp_overlap 3986873 3986876 3986892 TGAAGTCGAAGAAAA GCTGCTGCGTCC CGC GGACCCGGC-GC GCGGCGTCATTTTGC RPA3526 3988267 - 3986939 - | hypothetical protein TERM 2849 3987611 - 3987578 - G 83 -3.7 -5.15167 | gap 1 CACCACGAACAAAAA CACCGCGCT-GAAGCC GAA GGTGGCGAGCACGGTG CGGAGATCGCGGCGC RPA3527 3988434 - 3989318 + | hypothetical protein murB 3990342 - 3989368 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 3991786 - 3990383 - | UDP-N-acetylmuramate--L-alanine ligase TERM 2850 3990883 - 3990926 + g 80 -15.3 -3.28712 | gap 1 TGTCGTCGGAGAGGC CGAGCTCATGCGCCACGGCG ATCGC CGCGGTGGCGT-TGAGCGCG TTGTGGCGGCCCGGC murG 3993023 - 3991923 - | N-acetylglucosaminyl transferase TERM 2851 3992483 - 3992467 - G 74 -15.1 -3.06302 | overlap 3992450 AGCACCCGCAGCGAA CCGCCGG CGG CCGGCGG GTCGTAGGCGACAGT ftsW 3994170 - 3993028 - | putative cell division protein ftsW murD 3995821 - 3994412 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 3997094 - 3996009 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 3998544 - 3997105 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alany l-D-alanyl ligase TERM 2852 3998545 - 3998567 + r 75 -12 -3.54741 | CGGTTGTTTGCTCAT GCGGCGCT CGCTGAT AGCGCCGC TTTCGCGGCGTCGTG murE 3999998 - 3998541 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 2853 3999606 - 3999637 + g 70 -10.8 -3.55444 | overlap 3999607 ACCGATGGTCCCGAT GCTGGCGGCGGC ATGGCCGA GCCGCTGCCAGA TTTGCCGGGTGAAGG RPA3536 4001865 - 4000111 - | peptidoglycan glycosyltransferase TERM 2854 4000725 - 4000741 + g 74 -5.1 -4.56597 | overlap 4000703 4000722 GCTCGGTGCGCAGCC GGTCG AGCTGGC CGACC TTTTTCAGAAACGCC RPA3537 4002245 - 4001862 - | hypothetical protein RPA3538 4003240 - 4002242 - | methyltransferase TERM 2855 4004535 - 4004510 - g 74 -10.5 -3.85698 | gap 1 TTCCGCCCGGAGAAA GTCGACGGCATC GCC GACGCC-TCGAC GCTGGCAACGCTGCA RPA3539 4003820 - 4004605 + | peptidoglycan binding domain-containing protein TERM 2856 4004911 - 4004893 - T 76 -8.8 -4.15106 | overlap 4004905 GAGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCGTCGCCGGCAACG TERM 2857 4005153 - 4005191 + T 70 -10.3 -3.54424 | gap 1, opp_overlap 4005157 4005158 4005161 CCGGCTGATACTTAA TGAATGAAGGGCTCGGCG GAAG CGTCGGGCCCTTCGC-CA TTTCGCAAGGTCACA TERM 2858 4005187 - 4005158 - T 71 -13.5 -2.63164 | opp_overlap 4005153, overlap 4005157 4005161 TGATACTTAATGAAT GAAGGGCTCGGCG GAAG CGTCGGGCCCTTC GCCATTTCGCAAGGT RPA3540 4005771 - 4005202 - | putative cell filamentation protein RPA3541 4005973 - 4005773 - | hypothetical protein emrB1 4007614 - 4006022 - | drug resistance transporter EmrB/QacA subfamily RPA3543 4009033 - 4007765 - | multidrug resistance efflux pump TERM 2859 4007847 - 4007806 - G 70 -13 -2.99471 | gap 1 CGACGTCGACATAGA CCGACATGCCGGCGCGCAG CAGCC CTTCGCG-CGCCACGTCGG CGGGCACGCGAATCC TERM 2860 4008167 - 4008149 - G 75 -13.8 -3.28924 | opp_overlap 4008143 GAGGCGGTTGGAGAA CACGCCGG TCA CCGGCGCG CGCACATTGGTGAAA RPA3544 4009215 - 4009865 + | TetR family transcriptional regulator RPA3545 4011184 - 4009877 - | hypothetical protein TERM 2861 4010669 - 4010726 + g 72 -14.8 -2.70932 | overlap 4010662 CGCATTCAGCGACAC CGGCGCTTTGCCGTAG-CCGCCTTGCGG CGCG CCGT-AGCCGGTCTGCGGCTGTGCGCCG TAGTTCGGCGCGCGC TERM 2862 4010803 - 4010817 + g 75 -11.4 -3.64703 | overlap 4010785 4010782 GCGGCTGGCCGCCCG GCCAGC GCG GCTGGC TTTGGCTGGCACCAC TERM 2863 4011220 - 4011187 - R 71 -11 -3.50853 | gap 1 TTTTCTTAACCATAA GAGGCGC-GAGGAAC GTCGT GTCCCGCAGCGCCTC ACTGTCGCCGTCGTC RPA3546 4013197 - 4011242 - | methyl-accepting chemotaxis receptor/sensory transducer RPA3547 4013627 - 4013379 - | hypothetical protein RPA3548 4016911 - 4013663 - | serine protease/outer membrane autotransporter TERM 2864 4017037 - 4017015 - H 72 -7.6 -4.14243 | overlap 4016996 4017016 4017027 TATTGGAGCCCAAAA TCGGCGATCA GAC TGGTCGCCGC CGCGAGCGCGTGATA RPA3549 4017089 - 4017727 + | hydrolase RPA3550 4018092 - 4019861 + | coenzyme B12-binding:Elongator protein 3/MiaB/NifB RPA3551 4019858 - 4020577 + | short chain dehydrogenase RPA3552 4020574 - 4021392 + | putative short-chain dehydrogenase/reductase RPA3553 4022534 - 4021413 - | bile acid:sodium symporter arsC2 4023123 - 4022698 - | arsenate reductase arsC3 4023650 - 4023123 - | arsenate reductase arsR2 4023999 - 4023643 - | ArsR family transcriptional regulator ArsR2 RPA3557 4024290 - 4024054 - | Thiol-disulfide isomerase and thioredoxins RPA3558 4025351 - 4024302 - | permease TERM 2865 4025225 - 4025178 - G 71 -9.7 -3.7732 | gap 1, opp_overlap 4025209 GTCGTAGATGAAGAA CGCCAGCGCCCGGGCGGTACCG CCCGC CGG-ATCGAGCGGAAGCTGGCG CACGATCCATTCCGA arsR3 4025647 - 4025348 - | ArsR family transcriptional regulator ArsR3 TERM 2866 4025671 - 4025658 - H 71 -8.1 -3.86897 | TCCATCTCCGATAAA TGCGC CTAT GCGCA TAAGCGGTCAAGCGC RPA3560 4025789 - 4026574 + | hypothetical protein RPA3561 4026812 - 4027168 + | ArsR family transcriptional regulator arsM 4027158 - 4028009 + | arsenite S-adenosylmethyltransferase TERM 2867 4028368 - 4028406 + T 75 -3.7 -4.731 | gap 1, overlap 4028359 4028371 4028373 AGTCCTGGCCGCCGG CGACACGCGCCCGGTC CTGCTTGC GTCCGCGCGCG-GTGG TTTTCTTGGTGGCTT RPA3563 4029065 - 4028667 - | hypothetical protein TERM 2868 4029285 - 4029263 - R 100 -20.6 -3.84719 | AGCCCCAAACGCAAA GCGCCCGGCT GAC AGCCGGGCGC TTGAGAGGATCGCGC tnaA 4030764 - 4029316 - | tryptophanase RPA3565 4031035 - 4031754 + | ErfK/YbiS/YcfS/YnhG TERM 2869 4031786 - 4031822 + F 81 -13.8 -3.55761 | gap 1, opp_overlap 4031791, overlap 4031791 AGCGATTAGTTAATT CA-AAACGCGCGGTCTC ATCG GAGGCCGCGCGTTGCTG TTTCAGGCCTCCATC TERM 2870 4031816 - 4031791 - f 100 -16.1 -4.28774 | opp_overlap 4031786 4031791 TTAGTTAATTCAAAA CGCGCGGTCTC ATCG GAGGCCGCGCG TTGCTGTTTCAGGCC TERM 2871 4031791 - 4031816 + F 95 -18.3 -3.45571 | opp_overlap 4031791, overlap 4031786 TTAGTTAATTCAAAA CGCGCGGTCTC ATCG GAGGCCGCGCG TTGCTGTTTCAGGCC RPA3566 4031944 - 4032282 + | hypothetical protein TERM 2872 4032412 - 4032433 + F 74 -10.1 -3.70076 | gap 1, overlap 4032413 CCCTGGCCTGTATTG TCCC-GGCCG TTC CGGCCCGGGG TTTCGATGCGTTTCG TERM 2873 4032470 - 4032484 + G 77 -10 -3.91084 | TTGGATTGGTAGCAC TCGCGA TCG TCGCGA TTTCATTCACGGTCA RPA3567 4032439 - 4034001 + | hypothetical protein TERM 2874 4034040 - 4034075 + T 93 -20.4 -3.02829 | opp_overlap 4034046, overlap 4034067 ACTGATCTCGACACG CACAAACGCCGCCGGG GAAG CCCGGCGGCGTTCGCG TCTTCAGAAGATCTG TERM 2875 4034069 - 4034046 - T 100 -21 -3.95073 | opp_overlap 4034040 4034067 CTCGACACGCACAAA CGCCGCCGGG GAAG CCCGGCGGCG TTCGCGTCTTCAGAA RPA3568 4034635 - 4034096 - | hypothetical protein TERM 2876 4034877 - 4034839 - R 100 -16.9 -5.06414 | gap 1 GGTCCGGAATAAAAA GAGCGCATCCCCTTGCAC CGCA GCG-AAGGGAATGCGCTC GAACCGACGGCGTCA RPA3569 4035465 - 4034923 - | hypothetical protein TERM 2877 4035449 - 4035428 - G 72 -11.5 -3.58905 | AGCGGTGACAGATAA CTGCTGCCG CCTG CGGCAGCGG AGGAAATGGCGGTCA RPA3570 4035633 - 4036355 + | two-component transcriptional regulator RPA3571 4036352 - 4037686 + | two component sensor histidine kinase RPA3572 4039423 - 4037705 - | hypothetical protein TERM 2878 4039988 - 4039936 - g 72 -14.8 -2.73875 | gap 2, opp_overlap 4039965 4039983 4039985, overlap 4039933 GCTTCGCCAAGATGA CGACCGGCCATCAGCGCGTCGACGCC GAC GGCATCGCCGAGCTGG-AGCCGG-CG CTCGCCGGCCGGTTC TERM 2879 4039983 - 4040015 + G 77 -6.9 -4.56597 | gap 1, opp_overlap 4039936 4039933, overlap 4039965 4039985 ATCGCCGAGCTGGAG CCGGCGCTCGCCGG CCGGTT CCG-CGAGGGCCTG TTTTTCCCGGACGAA thiO 4039635 - 4040612 + | glycine oxidase ThiO thiS 4040603 - 4040800 + | thiamine biosynthesis protein ThiS thiG 4041053 - 4041835 + | thiazole synthase thiE 4041822 - 4042430 + | thiamine-phosphate pyrophosphorylase thiC 4042665 - 4044665 + | thiamine biosynthesis protein ThiC TERM 2880 4044695 - 4044722 + F 100 -15.6 -4.86731 | opp_overlap 4044682 AATTCGGCCTCGCGA GGCGGGTTAGCC GAAG GGTTAGCCCGCC TTTTCTTTAGACCGA TERM 2881 4045628 - 4045639 + G 72 -5.8 -4.39571 | overlap 4045617 CTTGCAAATGCATCT GGCA TTCG TGCC TTTTCGCTTTCTCAG RPA3578 4044836 - 4045711 + | hypothetical protein RPA3579 4045969 - 4046235 + | hypothetical protein RPA3580 4046232 - 4047152 + | integrase catalytic subunit RPA3581 4047318 - 4047139 - | putative 8.8 KD protein Y4HR RPA3582 4047969 - 4047439 - | hypothetical protein RPA3583 4048295 - 4047957 - | hypothetical protein TERM 2882 4048566 - 4048610 + G 88 -7.7 -5.06414 | GCAGCCGGTGATCGG CTTGATCGATGGCTGGGCG AGGCAGC CGCTCGGCCCTCGCTCCGG TTTTTCTTCCGACGA RPA3584 4048474 - 4049253 + | hypothetical protein RPA3585 4049953 - 4049441 - | hypothetical protein RPA3586 4050725 - 4050261 - | hypothetical protein RPA3587 4051923 - 4052207 + | hypothetical protein RPA3588 4053875 - 4052583 - | hypothetical protein TERM 2883 4053491 - 4053534 + g 74 -12.2 -3.50853 | opp_overlap 4053484 GATAAGAGGTGACGC GGCGGCCGAGCTGCACGGCG TCGG CGCCGAGCCGTTCGATCACC TTGTCGTTCAGCAGC TERM 2884 4054645 - 4054676 + G 79 -16.6 -3.05384 | gap 1, overlap 4054648 GCCGGCGCCTTGCGG GCATTGCGGCGCGCG GAC CGAGCGCCGCAA-GC TTCCGTCGCGGCGCA RPA3589 4054172 - 4054726 + | hypothetical protein RPA3590 4055147 - 4054719 - | hypothetical protein RPA3591 4055350 - 4055733 + | endoribonuclease L-PSP RPA3592 4055953 - 4057032 + | hypothetical protein TERM 2885 4057589 - 4057579 - g 72 -8.2 -4.07455 | overlap 4057580 TACGAAGATTACAAA GCGC AGC GCGC CCGCGAAGCCCGCGA RPA3593 4057138 - 4057776 + | triple helix repeat-containing collagen TERM 2886 4057771 - 4057797 + T 75 -11.6 -3.67597 | opp_overlap 4057770 4057767 4057758 4057771 4057773 AAGCGCAAGCACAAG GACTGATCGCAC TCC GCGCGATTAGTC TTGTTCAATGAGCCC RPA3594 4058085 - 4057819 - | hypothetical protein RPA3595 4058240 - 4058869 + | hypothetical protein RPA3596 4060089 - 4058884 - | hypothetical protein RPA3597 4061734 - 4060076 - | hypothetical protein RPA3598 4061895 - 4063706 + | methyl-accepting chemotaxis receptor/sensory transducer TERM 2887 4063730 - 4063769 + F 100 -24.4 -3.31263 | TCGCCTCCCCACTTA GCCTGAAGGCCCGGCTTC ACCC GAAGCCGGGCCTTCGCGC TTCTACCGCTCGCGT RPA3599 4063844 - 4064386 + | hypothetical protein bfr 4064924 - 4064442 - | bacterioferritin TERM 2888 4065078 - 4065054 - H 74 -10.6 -3.77264 | opp_overlap 4065063 4065072, overlap 4065055 CAAAACACTTAAGAA CCGGCGCGAC GCTCT GCCGCGCCGC ACAGCGCTTCGTTCA TERM 2889 4065077 - 4065055 - H 74 -14.1 -2.85274 | opp_overlap 4065063 4065072, overlap 4065054 AAAACACTTAAGAAC CGGCGCGAC GCTCT GCCGCGCCG CACAGCGCTTCGTTC RPA3601 4065648 - 4066007 + | hypothetical protein RPA3602 4066228 - 4066512 + | hypothetical protein TERM 2890 4066554 - 4066575 + T 100 -17.3 -5.28942 | CGTCTGAATGCCGAA CCCGGCCGA GCGA TCGGCCGGG TTTTTGTTTGCCCTC RPA3603 4068463 - 4066589 - | lytic murein transglycosylase RPA3604 4068423 - 4067833 - | hypothetical protein RPA3605 4069368 - 4068598 - | trans-aconitate 2-methyltransferase RPA3606 4069410 - 4069688 + | hypothetical protein RPA3607 4069978 - 4070232 + | AbrB/SpoVT family transcriptional regulator RPA3608 4070229 - 4070630 + | PilT protein, N-terminal TERM 2891 4070626 - 4070649 + T 81 -12.4 -3.8917 | overlap 4070627 CATTGATTACCCCTG ACTGACGCGC CTCA GCGCGTCAGC TTCTTGTACTTCGCG TERM 2892 4070627 - 4070648 + T 79 -15.9 -2.9302 | overlap 4070626 ATTGATTACCCCTGA CTGACGCGC CTCA GCGCGTCAG CTTCTTGTACTTCGC RPA3609 4072286 - 4070637 - | putative ABC transporter ATP-binding protein TERM 2893 4071978 - 4071992 + g 78 -10 -4.05446 | CGCCAGCTCGTTGTA GCGATC GAG GATCGC TTTCTGCTTGGCGAC TERM 2894 4072520 - 4072483 - H 70 -11.9 -3.15249 | gap 1 CATAGCGGCGACGAA TGCGCCGCCGAGTCGGCG CGG CGCCGACCCA-CGGGGCG ATAAGCATGGCGAGC RPA3610 4072527 - 4072727 + | hypothetical protein TERM 2895 4072787 - 4072751 - T 100 -21.7 -3.08046 | opp_overlap 4072756, overlap 4072756 TTGTCATCTGAAAAG CAAAACGCCCGCAGGTG AGC CACCGGCGGGCGTTTTA AAGCTGAGATTGGCC TERM 2896 4072756 - 4072782 + T 100 -19.4 -4.11394 | opp_overlap 4072751 4072756 ATCTGAAAAGCAAAA CGCCCGCAGGTG AGC CACCGGCGGGCG TTTTAAAGCTGAGAT TERM 2897 4072782 - 4072756 - T 100 -19.4 -4.67641 | opp_overlap 4072756, overlap 4072751 ATCTGAAAAGCAAAA CGCCCGCAGGTG AGC CACCGGCGGGCG TTTTAAAGCTGAGAT RPA3611 4073691 - 4072807 - | ErfK/YbiS/YcfS/YnhG TERM 2898 4073711 - 4073694 - H 71 -14.1 -2.62396 | CATCGGGCGACATCA CCGGCCC CTGC GGGCCGG CGGCCGGCGCCGCGT TERM 2899 4074315 - 4074345 + H 81 -10.4 -4.20712 | overlap 4074307 4074316 4074331 CGGCAATCGAGTCGC TGAGTCGTTTCGCG GCG CGTGATGCGACTCG TTTTGCGCTATTCTC TERM 2900 4074316 - 4074344 + H 70 -11.7 -3.11704 | overlap 4074307 4074315 4074331 GGCAATCGAGTCGCT GAGTCGTTTCGCG GCG CGTGATGCGACTC GTTTTGCGCTATTCT TERM 2901 4074489 - 4074499 + G 89 -8.2 -5.06414 | CATCCGAAATGCTTC CCGG TTT CCGG TTTTTGTTCGCGGCG TERM 2902 4075426 - 4075402 - g 70 -11.3 -3.61398 | GCGCCCGCTGAAGAA GCGCCGCCAGG TGG CGCGACGGCGC ACGCCGCGCGCCGAA RPA3612 4074440 - 4075474 + | hypothetical protein RPA3613 4076347 - 4075487 - | putative thiosulfate sulfurtransferase RPA3614 4076880 - 4076464 - | rhodanese-like protein RPA3615 4078201 - 4077026 - | hypothetical protein TERM 2903 4079729 - 4079715 - g 77 -5.6 -4.67011 | overlap 4079717 AAGGCGATGGAAAAA GAGGTC GAA GCCCTC AATGCCCGCCTGGCG TERM 2904 4080224 - 4080236 + G 77 -10.5 -3.91897 | CGACTGCTGCGTCAC CGCGG CCA CCGCG TTTGTCGATGACGCC RPA3616 4078368 - 4080302 + | diguanylate cyclase RPA3617 4080472 - 4080726 + | hypothetical protein TERM 2905 4080819 - 4080806 - f 79 -9.5 -4.19799 | AACAAACAACAACAA CGGCG CGCG CGCCG GATCAGACGAGGCTG RPA3618 4080841 - 4081683 + | ATPase TERM 2906 4081892 - 4081911 + F 100 -10.7 -4.69549 | TCAGAATTTGCGTCA TGGCCGG CTTGTC CCGGCCA TTTTCGTTTTGGGTT vanA 4082101 - 4083144 + | putative vanillate O-demethylase oxygenase, iron-sulfur subunit vanR 4083148 - 4083903 + | GntR family transcriptional regulator vanB 4083934 - 4084926 + | putative vanillate O-demethylase oxidoreductase RPA3622 4085313 - 4085029 - | hypothetical protein TERM 2907 4085443 - 4085465 + r 72 -11.9 -3.30159 | opp_overlap 4085438 ATCAAGGGAACCTGC GCCCGGCGG ATCAG CGGCCGGGC TTCTCGAACAGTTGG RPA3623 4086049 - 4085453 - | GCN5-related N-acetyltransferase RPA3624 4087127 - 4086198 - | gluconolactonase precursor TERM 2908 4087153 - 4087175 + H 71 -8.4 -3.88232 | gap 1 CGAGATGTTTGTTGT GCG-CGGGC GACGAG GCCCGGCGC TTATTGTCTCGGGGA TERM 2909 4087268 - 4087292 + H 70 -7.8 -4.07568 | opp_overlap 4087269, overlap 4087269 ATGATCAAGGAGACG ACGACGCGGA ACTAC TTCGCGTCGG TTTTCGGCGGCGACG TERM 2910 4087352 - 4087378 + H 79 -13.6 -3.48924 | GGCGCGGCATCCTTG GCCGGCGCAGGC TCG GCCTTGGCCGGC TTCTGTGCGGCCTGC TERM 2911 4087392 - 4087408 + H 72 -12.3 -3.28791 | GCTTCTGTGCGGCCT GCAGCTC GGC GAGCTGC TTCTGCAGCGCCGCT RPA3625 4087553 - 4088125 + | excinuclease ABC subunit C TERM 2912 4088902 - 4088870 - T 95 -11.1 -4.4891 | overlap 4088872 GGGATGATGAGAAAA GTCCCGGCCGGGCGC GGA GCACCAGCCGGGGAC GCGAAGCTCAGCTGC TERM 2913 4088899 - 4088872 - T 71 -13.4 -2.56836 | gap 1, overlap 4088870 GATGATGAGAAAAGT CCCGGCCGGGCGC GGA GCACC-AGCCGGG GACGCGAAGCTCAGC RPA3626 4089164 - 4088910 - | hypothetical protein RPA3627 4089637 - 4089161 - | putative glutathione peroxidase RPA3628 4091053 - 4089656 - | amidase RPA3629 4091382 - 4091125 - | hypothetical protein RPA3630 4091519 - 4092508 + | proline iminopeptidase RPA3631 4093291 - 4092518 - | putative glucose dehydrogenase RPA3632 4093389 - 4093871 + | MarR family transcriptional regulator RPA3633 4093891 - 4094565 + | hypothetical protein TERM 2914 4094844 - 4094808 - g 77 -5.1 -4.58685 | gap 1, opp_overlap 4094807 4094809 4094812, overlap 4094810 4094811 AAAGCGCTCGAAAAA CAC-GGCCAGGCGATC TGGCTG GATTTCCTGGCCCGCG GCTTTATCGCCAAGG TERM 2915 4097116 - 4097100 - g 72 -5 -4.56597 | overlap 4097101 GCGGCGTTCGAAAAA TCCGGC GCGCT GCCGGC GGAGACGCCTGCGCT TERM 2916 4097363 - 4097317 - g 75 -15.3 -2.78463 | gap 2, opp_overlap 4097356 AGGCGCTGCAGGATA TTCGGCTGAAGGTTCGCGACCAT CGC AAGGTCGCG-ACCTGC-GCCGAA TTCGGCCCGCGCTTC tal 4094709 - 4097633 + | bifunctional transaldolase/phosoglucose isomerase TERM 2917 4097797 - 4097770 - f 91 -9.2 -4.59853 | gap 1, overlap 4097774 GTAACCGCCTAAAAA CGTAGCCTCGC ACATCAA GCGAGGC-ACG GCTCAACAGTGGAGA TERM 2918 4098175 - 4098151 - g 79 -10.7 -3.91352 | AGACGCTGAAGGAAA CCAGCATCGAC TAC GTCGATGTCGG CACCTCCGGCGGCAT gnd 4097820 - 4098860 + | 6-phosphogluconate dehydrogenase-like protein TERM 2919 4099328 - 4099305 - g 73 -14.6 -2.90075 | gap 1 GGCTGCTTAAGGAGA CCAG-CGGCGC CTG GCGCCGGCTGG TGGTGGAGAAGCCGT zwf 4098857 - 4100371 + | glucose-6-phosphate 1-dehydrogenase TERM 2920 4100996 - 4101023 + GF 81 -13.4 -3.59979 | CTTCCAAGCGCGACA TCCTTGCCCGCG TGTT CGCTGGCGAGGA TTTGCCGTCCGCGCG pgl 4100374 - 4101111 + | 6-phosphogluconolactonase RPA3638 4101080 - 4101643 + | carbohydrate kinase, thermoresistant glucokinase TERM 2921 4101719 - 4101675 - f 72 -11.6 -3.34895 | opp_overlap 4101680 4101684, overlap 4101676 4101684 GTCATTGCGAACGAA GCGAAGCAATCCAGAAGC TCCGTGCAC GATTCTGGATTGCTTCGT CGCTCCGCTCCTCGC TERM 2922 4101718 - 4101676 - f 77 -15.1 -2.60723 | opp_overlap 4101680 4101684, overlap 4101675 4101684 TCATTGCGAACGAAG CGAAGCAATCCAGAAGC TCCGTGCAC GATTCTGGATTGCTTCG TCGCTCCGCTCCTCG cof 4101767 - 4102585 + | Cof-like hydrolase RPA3640 4104390 - 4102582 - | glycoside hydrolase family protein malQ 4106347 - 4104395 - | 4-alpha-glucanotransferase TERM 2923 4105625 - 4105605 - G 77 -12.5 -3.69333 | opp_overlap 4105605 CAGAATTTATCGAAA GCGGCGCGC AGG GCACGCCAC TTCATCGTCGCCACC RPA3642 4106445 - 4108511 + | alpha amylase, catalytic region RPA3643 4108522 - 4111824 + | putative trehalose synthase TERM 2924 4112622 - 4112642 + G 72 -11.9 -3.54424 | overlap 4112606 4112631 GCCGAGCAACTGCCG GCCTATGTC CGC GACATGGGC TTTACCCACGTCGAA glgB 4111821 - 4113971 + | glycogen branching enzyme TERM 2925 4114075 - 4114098 + F 90 -13.9 -4.07568 | AATGTGACGGTTTGG CGATGCCCG CGCGAT CGGGCATCG TTTTGCACAAAGCCA TERM 2926 4114657 - 4114599 - g 75 -14.1 -3.29144 | overlap 4114637 CGACCGCCGCGACAA CGCGCGCGG-CA-TGCCGAAGGTCGTCGT GGTCG ACGA-GACCGTCGGCAGCGGCCGC-CGCG AGACGCGGCCCGGTG glgX 4114210 - 4116291 + | glycogen debranching protein GlgX RPA3646 4116288 - 4118054 + | putative maltooligosyltrehalose trehalohydrolase RPA3647 4118054 - 4120840 + | malto-oligosyltrehalose synthase TERM 2927 4120830 - 4120852 + T 71 -5.5 -4.3739 | gap 1, overlap 4120831 GCGCGAAGCGAGTCC GGCG-GGGCT GAGC AGCCCGCGCG TTTTCTGCAGAGCTG TERM 2928 4121119 - 4121080 - T 74 -9.3 -3.89346 | gap 1, opp_overlap 4121080, overlap 4121083 CGCGCACCCCACAAA CACCGAGGCCGCCCGG GAGCTGGAG CCGGACGGCCT-GACG GGGTTTGTGCCGAGC RPA3648 4121565 - 4121257 - | hypothetical protein RPA3649 4121610 - 4121906 + | hypothetical protein ligD 4124790 - 4122046 - | ATP-dependent DNA ligase TERM 2929 4122946 - 4122979 + g 74 -12.3 -3.53761 | gap 1 GCCCATCACCTCGGA GCGGGCGGCATCG-GC CCG GCGCGGCGCCGCGCGC TTTGCGGCCGGCTTG TERM 2930 4123438 - 4123468 + g 70 -2.5 -4.66609 | gap 2 CTTGGTCCAGCCATC GCTGCGACCGGAGCG ATA CGCGGCG-TCG-AGC TTTTTCGATACGATC TERM 2931 4124271 - 4124314 + g 73 -14.4 -3.14132 | opp_overlap 4124276 AGCGGTCTTCGTCGA GCACAGTGTTGGCGTCGCCC TCGC GGGCGTCGTCGTCGCGGTGC TTGATCAGCAGCCAA RPA3651 4124924 - 4125805 + | Ku domain-containing protein TERM 2932 4125922 - 4125876 - T 79 -13.7 -3.53012 | gap 1, opp_overlap 4125862 4125875 4125876 4125872, overlap 4125877 CGGGTTTGCCCCAAA CCGTCATTCCGGG-GCGCGAGC GCAA GCTCGCGAACCCGGAATCTCGA AGTTGTTTTCCGGCA TERM 2933 4125921 - 4125877 - T 75 -15 -2.71712 | gap 1, opp_overlap 4125862 4125875 4125876 4125872, overlap 4125876 GGGTTTGCCCCAAAC CGTCATTCCGGG-GCGCGAGC GCAA GCTCGCGAACCCGGAATCTCG AAGTTGTTTTCCGGC RPA3652 4126426 - 4126028 - | hypothetical protein TERM 2934 4126382 - 4126402 + g 74 -8.1 -4.21351 | GCGCTTCTTCAGCGC GCGGCCGAC CTT GGCGGACGC TTTCTTAGAATATTT RPA3653 4126747 - 4126487 - | SirA-like mobA 4126878 - 4127498 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 2935 4127584 - 4127526 - T 100 -22.8 -2.70932 | gap 3, opp_overlap 4127534 4127539 4127543, overlap 4127539 4127543 CCGTCTTTGCAAGGA GCGTAGCG-A-CGAAGCAATCCAGCACCG AGCA CGGGGCTGGATTGCTTCGCTTCGCT-CGC AATGACTGCAGCGGT TERM 2936 4127534 - 4127575 + T 100 -21.7 -3.06183 | opp_overlap 4127526 4127539 4127543, overlap 4127539 4127543 GCAAGGAGCGTAGCG ACGAAGCAATCCAGCACCG AGCA CGGGGCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2937 4127570 - 4127539 - T 93 -18.8 -3.18582 | opp_overlap 4127539 4127534 4127543, overlap 4127526 4127543 GAGCGTAGCGACGAA GCAATCCAGCACCG AGCA CGGGGCTGGATTGC TTCGCTTCGCTCGCA TERM 2938 4127539 - 4127570 + T 93 -18.8 -3.19192 | opp_overlap 4127526 4127539 4127543, overlap 4127534 4127543 GAGCGTAGCGACGAA GCAATCCAGCACCG AGCA CGGGGCTGGATTGC TTCGCTTCGCTCGCA TERM 2939 4127543 - 4127566 + T 74 -12.4 -3.40788 | opp_overlap 4127539 4127526 4127543, overlap 4127539 4127534 GTAGCGACGAAGCAA TCCAGCACCG AGCA CGGGGCTGGA TTGCTTCGCTTCGCT TERM 2940 4127566 - 4127543 - T 74 -12.4 -3.40867 | opp_overlap 4127543 4127539 4127534, overlap 4127539 4127526 GTAGCGACGAAGCAA TCCAGCACCG AGCA CGGGGCTGGA TTGCTTCGCTTCGCT RPA3655 4128660 - 4127608 - | alcohol dehydrogenase RPA3656 4129728 - 4128739 - | hypothetical protein TERM 2941 4130800 - 4130811 + G 84 -5.8 -4.91109 | GATCACGATCCGAAG CAGC CGGA GCTG TTTTTGTCGTGCGGC fadD2 4129813 - 4131375 + | acyl-CoA synthetase ureF 4132374 - 4131439 - | urease accessory protein UreF RPA3659 4133103 - 4132804 - | hypothetical protein ureC 4135029 - 4133317 - | urease subunit alpha TERM 2942 4133859 - 4133875 + g 100 -13.7 -4.90906 | overlap 4133855 GCGCCGAGTCCTGCG GCAGCGC GCC GCGCTGC TTTTTCATCTTGTCG RPA3661 4135562 - 4135026 - | metal dependent phosphohydrolase ureB 4135867 - 4135562 - | urease subunit beta ureA 4136331 - 4136029 - | urease subunit gamma TERM 2943 4136425 - 4136382 - R 83 -15.3 -3.14931 | opp_overlap 4136375 4136407 4136408 GTGACGCGGGATCAA CTCAGCCACAGCCGC-GGCAG CGCA CGGCCGGCGGC-GCGGCCGAG GATGGTCATCATATC ureD 4137295 - 4136378 - | urease accessory protein UreD TERM 2944 4137034 - 4136999 - G 76 -14.6 -3.12668 | opp_overlap 4137006 GAGGCTGATACTGAA GCGATCCCCACCGGCG ACGC CGCCGGCGGTGTTCAC CAGCACGGCTGAGAG TERM 2945 4137006 - 4137027 + g 70 -12.9 -3.01712 | opp_overlap 4136999 ATACTGAAGCGATCC CCACCGGCG ACGC CGCCGGCGG TGTTCACCAGCACGG TERM 2946 4137397 - 4137413 + r 72 -12.3 -3.32343 | overlap 4137404 CCCCTCACCCGATCG GCATCGC TGC GCGATGC TTGTCGACCTCTCCC RPA3665 4138189 - 4137494 - | possible ATP-binding component of ABC transporter RPA3666 4139173 - 4138409 - | possible ATP-binding component of ABC transporter RPA3667 4140369 - 4139170 - | inner-membrane translocator TERM 2947 4139269 - 4139292 + g 72 -8.8 -4.07568 | GCGCGAGTCCAGCCA GGCATTGACG GTAC CGACGATGCC TTTTGGCAGCAGCAG RPA3668 4142056 - 4140443 - | inner-membrane translocator TERM 2948 4141374 - 4141404 + g 76 -16 -2.90075 | TCGATCGCCGCCTTG GCGCCGGCGATGCC GCT GGCGACGGCGGCGC TCTGGTTCGACGGCG TERM 2949 4142095 - 4142132 + r 93 -18.6 -3.30124 | gap 2, opp_overlap 4142100, overlap 4142095 4142100 GGTGCGTCGGAGGAT G-GAAAGGGCGGCG-CGC ACCG GCGTCGCCGCCCTTTCGC TTGTCAGACGTCAGC TERM 2950 4142095 - 4142131 + r 87 -18.8 -2.57931 | gap 1, opp_overlap 4142100, overlap 4142095 4142100 GGTGCGTCGGAGGAT GGAAAGGGCGGCG-CGC ACCG GCGTCGCCGCCCTTTCG CTTGTCAGACGTCAG TERM 2951 4142100 - 4142126 + r 100 -17.3 -3.80625 | gap 1, opp_overlap 4142100, overlap 4142095 4142095 GTCGGAGGATGGAAA GGGCGGCG-CGC ACCG GCGTCGCCGCCC TTTCGCTTGTCAGAC TERM 2952 4142126 - 4142100 - R 100 -17.3 -3.68351 | gap 1, opp_overlap 4142095 4142095 4142100 GTCGGAGGATGGAAA GGGCGGCG-CGC ACCG GCGTCGCCGCCC TTTCGCTTGTCAGAC RPA3669 4143488 - 4142166 - | putative urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor TERM 2953 4143336 - 4143291 - G 73 -9.6 -3.96148 | CTCGTCGATCAGAAA CAGCACCGTGTCCTTCAGCG TGGTCT CGCTGATCGCCATGGTGCCG GACAGCGAATGCAGC TERM 2954 4143436 - 4143416 - G 77 -16.1 -2.64981 | opp_overlap 4143416 4143415, overlap 4143412 4143413 ACAGGCCCAAAGCCA GGCCGGCCG CCG CGGCCAGCC ATTTGCGGCGGCTGA TERM 2955 4143944 - 4143966 + H 100 -14.8 -4.11623 | CAGAGTTTCCAAGCG CTCCCGACGG GCT CCGTCGGGCG TTTGCTTTCATGATG TERM 2956 4145378 - 4145358 - g 75 -4.5 -4.62069 | overlap 4145359 TTTGCAGCGCAAAAA CCGTCCGGC GCA GCCGACCGC TCAGCACCGACCGCA RPA3670 4143976 - 4145400 + | putative ATP-dependent RNA helicase infA 4145425 - 4145703 + | translation initiation factor IF-1 TERM 2957 4145751 - 4145725 - f 100 -22.4 -3.9461 | overlap 4145747 GCTGCCTAATAACAA GGCGCTTTGCCG ACC CGGCAAAGCGCC CGACGCCCCCTACTT cspA5 4145943 - 4146197 + | cold-shock DNA-binding domain protein TERM 2958 4146218 - 4146250 + T 88 -17 -3.06991 | opp_overlap 4146203 4146221, overlap 4146222 TTTCGGTTCTGAACC GAATGGGGCCGCGC CAACA GCGCGGCCTCTTTC ATTTTGGGCATGCTC TERM 2959 4146222 - 4146246 + T 100 -16.4 -4.20136 | opp_overlap 4146221, overlap 4146218 GGTTCTGAACCGAAT GGGGCCGCGC CAACA GCGCGGCCTC TTTCATTTTGGGCAT RPA3673 4146937 - 4146311 - | hypothetical protein RPA3674 4147483 - 4146950 - | hypothetical protein TERM 2960 4147364 - 4147343 - G 79 -7.4 -4.56597 | overlap 4147363 CTGGCTGGCGAAAAA GATCATTG CCACTT CAATGATC GCGAACAACAACGCG RPA3675 4148391 - 4148555 + | Flp/Fap pilin component TERM 2961 4148603 - 4148576 - f 73 -11.2 -3.61517 | opp_overlap 4148580, overlap 4148580 AGGTTGGCCGAACAA TCAAGGCCCCGG CGTT CCGGGGCCTTTT TTGTTCATCGTCCCT TERM 2962 4148580 - 4148599 + F 100 -16.4 -5.52023 | opp_overlap 4148576 4148580 TGGCCGAACAATCAA GGCCCCGG CGTT CCGGGGCC TTTTTTGTTCATCGT TERM 2963 4148599 - 4148580 - f 89 -16.4 -3.53444 | opp_overlap 4148580, overlap 4148576 TGGCCGAACAATCAA GGCCCCGG CGTT CCGGGGCC TTTTTTGTTCATCGT TERM 2964 4148834 - 4148854 + F 76 -6.1 -4.58283 | overlap 4148835 GCCATCTAGTTTGGT TTCGAGCCG CAA TGGTTCGAG TTTTTCGCAGAGTTC RPA3676 4148883 - 4149407 + | peptidase A24A, prepilin type IV RPA3677 4149514 - 4150095 + | hypothetical protein RPA3678 4150110 - 4151552 + | type II and III secretion system protein TERM 2965 4151602 - 4151625 + G 75 -13.8 -3.26546 | opp_overlap 4151596 TCCGCCAAAGTGGCG CGCGGCCTCG GTCT TGGGGCCGCG TTGATCGGTTTCTCG RPA3679 4151572 - 4152300 + | pilus assembly protein cpaD RPA3680 4152297 - 4153568 + | pilus assembly protein cpaE TERM 2966 4153652 - 4153634 - f 91 -16 -3.53811 | GTCAGGGCCCCGAAA CCGGCGAG CTT CTCGCCGG AGCCGGCGATGCGCG RPA3681 4153661 - 4155043 + | type II secretion system protein E RPA3682 4155056 - 4156030 + | type II secretion system protein TERM 2967 4156396 - 4156454 + G 70 -10.8 -3.53091 | overlap 4156397 4156410 TTCCTGTTCTTCCGC ATGGTGATGCCGATCGCGTTCGGCGCGG CCT CGGCGCTGTACGTGTTCGTCATCGCGAA TTTCGACCAGCCGCT TERM 2968 4156919 - 4156902 - g 74 -9.8 -3.79906 | overlap 4156903 CGAGGCCGAGAAGAA GGCGGC GGCGCT GCCGCC CAAGCTCACCGTGCC RPA3683 4156039 - 4157013 + | type II secretion system protein RPA3684 4157846 - 4157037 - | TPR repeat-containing protein TERM 2969 4157496 - 4157529 + g 85 -15.9 -3.73534 | gap 1, opp_overlap 4157485, overlap 4157527 GAAATTGCCGTTGTC GGC-GAGCGCGCGGCC GTA GGCCGCCCGCACCGCC TTGTTGCTGGGATTG TERM 2970 4158723 - 4158698 - g 73 -11.1 -3.75024 | GCTGATCATGAAGAA GGACATGGGCG GCGC CGCCAACGTCC TGGCGCTGGCCTCGA RPA3685 4157949 - 4159331 + | leucyl aminopeptidase TERM 2971 4159434 - 4159461 + G 85 -13.4 -4.07885 | gap 1, opp_overlap 4159430 GTTCGAAGTCAGCTA CGGCGTGGCGCCG GTG CGGCGCGA-GCCG TTTTCCGGCGCGATG RPA3686 4159324 - 4160169 + | NLP/P60 RPA3687 4160791 - 4160153 - | nucleoside diphosphate pyrophosphatase TERM 2972 4160428 - 4160442 + g 79 -11.4 -3.76968 | opp_overlap 4160411 GTTCGGCGAGCTGCG TCGGCG CCA CGCCGA TTTCCTCGATACATT TERM 2973 4160715 - 4160772 + g 83 -14.1 -3.78022 | gap 1, opp_overlap 4160708 GCCATGAACCCCTGC CCGATCAGTTCAGGGGCCGACACGGTGA CGT TCGCCGCG-CGGTCCGCGAGCTGATCAG TTTGGTCACTCTCGC RPA3688 4162436 - 4160799 - | peptide ABC transporter, ATP-binding protein RPA3689 4163620 - 4162442 - | binding-protein-dependent transport systems inner membrane component RPA3690 4164729 - 4163620 - | binding-protein-dependent transport systems inner membrane component TERM 2974 4163959 - 4163974 + g 79 -4.7 -4.72272 | GTATTGCTTACGGAT CTCGT CCAGGA ACGAG TTTTTGGTCAGCAGC RPA3691 4166596 - 4164731 - | extracellular solute-binding protein, family 5 RPA3692 4168470 - 4166611 - | putative peptide ABC transporter, periplasmic peptide-binding protein TERM 2975 4168136 - 4168109 - G 77 -4 -4.75372 | gap 1, opp_overlap 4168131 ATCACCCAGGAAAAA TCGTCGGGATGCG CAG CGC-CCTCGGCGA GCAAGCCGTATTCGG TERM 2976 4168692 - 4168672 - R 100 -18.3 -5.07652 | overlap 4168685 TTTCGCAAAACAAAA CGGCCGGGA AAA TCCCGGCCG TTCAACGTCCCAGTC RPA3693 4169273 - 4168719 - | putative cytochrome c kdsB 4169473 - 4170210 + | 3-deoxy-manno-octulosonate cytidylyltransferase RPA3695 4170282 - 4171124 + | prephenate dehydratase RPA3696 4171790 - 4171164 - | TetR family transcriptional regulator TERM 2977 4171811 - 4171828 + H 81 -6.3 -4.77896 | overlap 4171813 AATGCGAGTAGCGTT TGTGAGC TTTC GCTCATA TTTTTGCATTCGTTA emrA 4171914 - 4173092 + | putative multidrug resistance protein emrB2 4173089 - 4174621 + | MFS family drug efflux pump RPA3699 4174638 - 4175366 + | iron-chelator utilization protein RPA3700 4176450 - 4175434 - | luciferase-like metF 4176861 - 4177748 + | 5,10-methylenetetrahydrofolate reductase metH 4177761 - 4181642 + | B12-dependent methionine synthase RPA3703 4181818 - 4182099 + | hypothetical protein RPA3704 4182776 - 4183063 + | excinuclease ABC subunit C glpK 4184883 - 4183381 - | glycerol kinase nasT 4185092 - 4185676 + | putative two-component response regulator:antitermination factor NasT RPA3707 4185673 - 4186833 + | nitrate transporter component, nrtA RPA3708 4186852 - 4187292 + | globin-like protein TERM 2978 4187508 - 4187549 + F 100 -12.4 -5.18357 | gap 3, opp_overlap 4187507 4187508 AACTCCGACAGCAAC GCCGCTGTCCTGG--CCTCGC TCC GCGAGCAACCAGG-CAGCGGC TTTTTTCGTCGGTTC TERM 2979 4187549 - 4187508 - f 74 -14.6 -2.55847 | gap 3, opp_overlap 4187508, overlap 4187507 AACTCCGACAGCAAC GCCGCTGTCCTGG-C-CTCGC TCC GCGAGCAACCAGG-CAGCGGC TTTTTTCGTCGGTTC RPA3709 4187646 - 4188071 + | hemoprotein TERM 2980 4189145 - 4189113 - g 77 -9.9 -3.96148 | gap 1, overlap 4189125 4189126 4189129 CTTGTGGAGGACAAA CTCGGCC-GCAAAC TGATCC GTGTGCCGGCCGAG GCCGCTGCGCCGCGC nirA 4188114 - 4189886 + | ferredoxin-nitrite reductase TERM 2981 4191176 - 4191186 + G 75 -6.8 -4.30719 | TTCGGCCATCAGCGC TCGG CCT CCGA TTTCTTCTACGAGGA TERM 2982 4191433 - 4191385 - g 72 -14.6 -2.72344 | gap 2 GCGCATGGCCAAGGA TG-TCGAGCG-CGCGCTGGTCGAC ATC GTCGCCCAGCACGGCGCCCGTTCA GCAGCGGAGGCGACG RPA3711 4189883 - 4191502 + | sulfite reductase TERM 2983 4191630 - 4191589 - T 70 -12.3 -3.23853 | gap 1, opp_overlap 4191558 4191553, overlap 4191587 4191591 4191593 TGTTTCCAAGGAAGA GAGATTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAATGAC GACGGAGAGGGCTAC TERM 2984 4191628 - 4191591 - T 76 -13.5 -3.18366 | gap 1, opp_overlap 4191558 4191553, overlap 4191589 4191587 4191593 TTTCCAAGGAAGAGA GATTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAATG ACGACGGAGAGGGCT TERM 2985 4191626 - 4191593 - T 86 -16.1 -3.15147 | gap 1, opp_overlap 4191558 4191553, overlap 4191591 4191589 4191587 TCCAAGGAAGAGAGA TTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAA TGACGACGGAGAGGG TERM 2986 4192436 - 4192492 + T 71 -8.6 -3.85698 | gap 1, overlap 4192437 4192439 4192466 4192470 TCCCTGATTGTTTTT CGTTGTCGTCATTCCGGG-GCGCGAGC GGAA GCTCGCGAACCCGGAATCCCGAGGCTG TTTGTGCGACCGAGA TERM 2987 4192470 - 4192519 + T 74 -14.4 -2.67803 | gap 2, overlap 4192439 4192437 4192436 4192466 4192506 4192508 CGCGAGCGGAAGCTC GCGAACCCGGAATCCCGAGGCTGT TTGT GC-GAC-CGAGATTCCGGGTTCGC TCACTTTCGTGAGCG TERM 2988 4192506 - 4192545 + T 75 -12.3 -3.61715 | overlap 4192470 4192466 4192508 TGTTTGTGCGACCGA G-ATTCCGGGTTCGCTCAC TTTC GTGAGCGC-CCCGGAATAC TTGTTGAGCGACCTG TERM 2989 4192508 - 4192542 + T 79 -15.1 -2.93073 | gap 1, overlap 4192470 4192466 4192506 TTTGTGCGACCGAGA TTCCGGGTTCGCTCAC TTTC GTGAGCGC-CCCGGAA TACTTGTTGAGCGAC pimD 4193705 - 4192563 - | pimeloyl-CoA dehydrogenase (small subunit) TERM 2990 4193782 - 4193839 + r 100 -21.3 -3.14132 | overlap 4193786 GGGATGCGCCCTCTT GGGCGCAGGCCCGGAATCCATACTCCC AGCA GGGGTTATGGATTCCGGGCTCGCTCAC TTCGTGAGCGCCCCG TERM 2991 4193786 - 4193835 + r 100 -23.7 -2.56596 | overlap 4193782 TGCGCCCTCTTGGGC GCAGGCCCGGAATCCATACTCCC AGCA GGGGTTATGGATTCCGGGCTCGC TCACTTCGTGAGCGC pimC 4195064 - 4193874 - | pimeloyl-CoA dehydrogenase (large subunit) TERM 2992 4195236 - 4195259 + r 91 -18.2 -3.18264 | GGCTTTGCCGGTCGA CCTCTCCCCG CGCG CGGGGAGAGG TTACTCAGTGCCCAC pimB 4196466 - 4195279 - | acetyl-CoA acetyltransferase pimA 4198156 - 4196498 - | AMP-dependent synthetase and ligase TERM 2993 4198078 - 4198031 - G 77 -11.2 -3.78775 | gap 1 CTGCCGATCACGAAA CT-CCAACGCCGGCCGCGACGCA TAG TCCTTCGCGGCCTGCGCCAGCAG CTCCGGCAACGTCCC pimF 4200434 - 4198335 - | enoyl-CoA hydratase RPA3718 4200567 - 4201433 + | IclR family transcriptional regulator ilvG 4201464 - 4202264 + | putative high-affinity branched-chain amino acid transport system ATP-binding protein ilvF 4202261 - 4202974 + | putative branched-chain amino acid transport system ATP-binding protein RPA3721 4202985 - 4203863 + | ABC transporter permease ilvM 4203866 - 4204885 + | putative branched-chain amino acid transport system permease protein TERM 2994 4204910 - 4204936 + F 100 -19.5 -5.27335 | CACCGACCACTGCCA GCCCCTCGCGA CCCGT TCGCGAGGGGC TTTTTCTTTGGCCGC RPA3723 4205084 - 4206319 + | leucine/isoleucine/valine-binding protein precursor ilvK 4206500 - 4207732 + | high-affinity leucine-isoleucine-valine transport system; periplasmic binding protein TERM 2995 4207766 - 4207791 + F 100 -19.1 -4.86731 | CCCGATTCTCACCCC TCCCCCGGCAA GCGA TTGCCGGGGGA TTTTCTTTGCGCCGA ilvJ 4208080 - 4209309 + | leucine/isoleucine/valine-binding protein precursor TERM 2996 4209344 - 4209380 + T 100 -17.9 -3.64822 | opp_overlap 4209345 4209348 4209351, overlap 4209347 4209351 4209367 CAGCACTCAACAACA AGCAGAAGCCCCGGGCG TCA CGCCCGGGGCTTCGTCG TTTCGATCCGCCGGT TERM 2997 4209379 - 4209345 - T 100 -21.4 -3.97709 | opp_overlap 4209344 4209347 4209351 4209367, overlap 4209348 4209351 AGCACTCAACAACAA GCAGAAGCCCCGGGCG TCA CGCCCGGGGCTTCGTC GTTTCGATCCGCCGG TERM 2998 4209347 - 4209377 + T 100 -22.6 -2.94144 | opp_overlap 4209345 4209348 4209351, overlap 4209344 4209351 4209367 CACTCAACAACAAGC AGAAGCCCCGGGCG TCA CGCCCGGGGCTTCG TCGTTTCGATCCGCC TERM 2999 4209376 - 4209348 - T 100 -26.1 -3.0371 | opp_overlap 4209347 4209344 4209351 4209367, overlap 4209345 4209351 ACTCAACAACAAGCA GAAGCCCCGGGCG TCA CGCCCGGGGCTTC GTCGTTTCGATCCGC TERM 3000 4209351 - 4209373 + T 100 -22 -3.33483 | opp_overlap 4209351 4209348 4209345, overlap 4209347 4209344 4209367 CAACAACAAGCAGAA GCCCCGGGCG TCA CGCCCGGGGC TTCGTCGTTTCGATC TERM 3001 4209373 - 4209351 - T 100 -22 -3.64882 | opp_overlap 4209347 4209344 4209351 4209367, overlap 4209348 4209345 CAACAACAAGCAGAA GCCCCGGGCG TCA CGCCCGGGGC TTCGTCGTTTCGATC RPA3726 4209934 - 4209434 - | hypothetical protein RPA3727 4210179 - 4211219 + | CorA metal Ion (Mg2+/Co2+) transporter (MIT) family protein TERM 3002 4211481 - 4211513 + G 77 -15.6 -3.05844 | gap 2, overlap 4211504 CCGGCGCGGCCGATC TCGCGCGCAAGGCGCC GGA GGCGCC--GCGCGCGG TGTTCGACTGGAGCG TERM 3003 4212458 - 4212472 + G 73 -12.8 -3.44848 | overlap 4212455 GCCAACTATCCGTAT GCGCGG GTG CCGCGC TATTTCGTCCGCCAG RPA3728 4211408 - 4213420 + | hypothetical protein TERM 3004 4213528 - 4213497 - T 76 -10.9 -3.7398 | gap 1, overlap 4213495 TTGCAAGGGAAAAGA CGTGGATGGCCGGG ACGAG CCCGGCCATG-ACG AGGGTCTCGCACGGG RPA3729 4214853 - 4213681 - | peptidase M20D, amidohydrolase TERM 3005 4215564 - 4215589 + G 77 -11.1 -3.85698 | gap 1, opp_overlap 4215559 4215560, overlap 4215559 4215578 TCAACCAGAAGCGCG GCCG-GCGCTGG TCG TCGGCGCGCGGC TTTCTCAAGCCCGCA TERM 3006 4216215 - 4216178 - g 77 -7.6 -4.31085 | overlap 4216180 4216182 GAGATCAAGCTAAAA TCCACCGCGCTCGACG CCGCGC CGTCGATCGCGCCGCA CTATCTGTCGACGGC RPA3730 4214978 - 4216597 + | GMC-type oxidoreductase RPA3731 4216597 - 4217499 + | alpha/beta fold hydrolase argD1 4218915 - 4217524 - | aminotransferase class-III TERM 3007 4218959 - 4218982 + r 72 -3.8 -4.66535 | gap 1 CCGTCAACACAAAAG GCTGGCGGTGC GTC GCACT-CGAGC TTTCTTTTCAGAGTT TERM 3008 4219196 - 4219184 - R 76 -6.2 -4.56597 | CCGGTGCGGGAAAAA CGCC TCCCC GGCG AAGTCCCGGTCCGGG RPA3733 4221859 - 4219247 - | hypothetical protein TERM 3009 4221535 - 4221518 - G 89 -10.5 -4.56597 | overlap 4221496 GCTGCGGTCGAAAAA CGGCCCG CCGC CGAGCCG CTTCACCGAGTCGAA ispH 4222189 - 4223109 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RPA3735 4223149 - 4224309 + | radical SAM family protein TERM 3010 4224358 - 4224339 - T 100 -16.4 -4.2349 | opp_overlap 4224339 CTTCCACATTCAAAA GCGCGGCC CGCG GGCCGCGC TTTTTTGTTGAGTAC TERM 3011 4224339 - 4224358 + T 100 -16.4 -5.4833 | opp_overlap 4224339 CTTCCACATTCAAAA GCGCGGCC CGCG GGCCGCGC TTTTTTGTTGAGTAC pstS2 4225388 - 4224384 - | putative phosphate transport system substrate-binding protein RPA3737 4226666 - 4225422 - | putative phosphonoacetate hydrolase RPA3738 4226824 - 4227714 + | LysR family transcriptional regulator TERM 3012 4227804 - 4227766 - T 74 -10.2 -3.82083 | gap 1, overlap 4227760 4227767 4227769 CGATGACAACGGAAA TCACGTC-CGCGCCGCC CTCACC GGCGGCGCGTGATGCGC TCAGATCTCGGCGAC TERM 3013 4227803 - 4227767 - T 74 -13.7 -2.88768 | gap 1, overlap 4227760 4227766 4227769 GATGACAACGGAAAT CACGTC-CGCGCCGCC CTCACC GGCGGCGCGTGATGCG CTCAGATCTCGGCGA TERM 3014 4227801 - 4227769 - T 71 -12.7 -2.98778 | gap 1, overlap 4227760 4227767 4227766 TGACAACGGAAATCA CGTC-CGCGCCGCC CTCACC GGCGGCGCGTGATG CGCTCAGATCTCGGC RPA3739 4228548 - 4227805 - | hypothetical protein sqhC 4230506 - 4228545 - | squalene cyclase RPA3741 4231796 - 4230540 - | amine oxidase TERM 3015 4230715 - 4230769 + g 80 -9.1 -4.17089 | opp_overlap 4230715 4230734, overlap 4230716 GTAGCGGCGAACGTA GCGCGGCGCTCGCGGACAATTTGCC ACGGC GGCAGATTGGCCGAGATCCCCGCAA TTTTACAGATTTCGC RPA3742 4232635 - 4231796 - | squalene/phytoene synthase TERM 3016 4232028 - 4231986 - G 75 -9.1 -4.07568 | gap 2 TCGGCGGCGGCAAAA TGCGCGAGCGCACGCTCGACC AGC GG-CGCGCAGACGCTCG-GCA GCGCCGAATCCGCCG RPA3743 4233510 - 4232632 - | squalene/phytoene synthase TERM 3017 4233588 - 4233549 - R 100 -24.4 -5.58454 | gap 1 TGGAGACGAAAAAAA GCGAACGGCCGCACCCGGC CGG GCCGGGCGCA-CCGTTCGC GACGCCATATAAGGG TERM 3018 4233703 - 4233684 - R 76 -12.8 -3.53012 | overlap 4233695 4233696 GCCGCGGCCTCCAAA CCGGGCCA AAAC CGGCCCGG CGGACGCCGCCTCAC RPA3744 4233954 - 4233715 - | hypothetical protein RPA3745 4234344 - 4234847 + | hypothetical protein TERM 3019 4234905 - 4234878 - T 100 -21.4 -4.30576 | opp_overlap 4234878 GCTCCATCAGCAAAA GCCCTCCGGATC GACC GATCCGGAGGGC TTTTTGTTTTCACAA TERM 3020 4234878 - 4234905 + T 100 -21.4 -5.45802 | opp_overlap 4234878 GCTCCATCAGCAAAA GCCCTCCGGATC GACC GATCCGGAGGGC TTTTTGTTTTCACAA RPA3746 4237311 - 4234942 - | RND superfamily transporter TERM 3021 4235140 - 4235104 - G 89 -15.2 -4.09685 | gap 1 CGGCAGGTCCGAAAA CACCGTGACGCCGAGCC CGCA GGC-CAGCACCACGGTG GTGAGGATCAGCGCC eutC 4238286 - 4237519 - | ethanolamine ammonia-lyase small subunit RPA3748 4239877 - 4238294 - | radical SAM family protein eutB 4241487 - 4240105 - | ethanolamine ammonia lyase large subunit TERM 3022 4241566 - 4241539 - R 76 -11.2 -3.74693 | overlap 4241540 CCGGAGGGTAGCAAA GCCGTGCGCGTC AGGC GACCCGCACGGT TGCGAGAAATTTAGC TERM 3023 4241565 - 4241540 - R 77 -14.7 -2.84602 | overlap 4241539 CGGAGGGTAGCAAAG CCGTGCGCGTC AGGC GACCCGCACGG TTGCGAGAAATTTAG RPA3750 4243252 - 4241549 - | methyl-accepting chemotaxis sensory transducer TERM 3024 4242894 - 4242923 + g 73 -12.1 -3.36492 | gap 1 TTGAGCTTCTGGAAC GGCGGCTTGGCGGC GTC GGCGCCGAGC-GCC TTCTCGACTTCGCCA TERM 3025 4242958 - 4242972 + g 81 -11.4 -3.95852 | overlap 4242953 4242968 CGGCCGGGATCTGCG CCACCG CCG CGGTGG TTTCCTTCATCACCT RPA3751 4243761 - 4243306 - | hypothetical protein TERM 3026 4243744 - 4243717 - G 81 -16.2 -3.09516 | opp_overlap 4243716 4243714 4243713 4243712 CGGGGCAGCAGCGAA CGCCAGCGCGGC GGCA GCCGCGACGGCG ATCATCTTATGGCTC RPA3752 4244843 - 4243965 - | transglutaminase-like domain-containing protein RPA3753 4247341 - 4244840 - | hypothetical protein TERM 3027 4245296 - 4245251 - G 77 -14 -3.41602 | opp_overlap 4245254 4245280 GCCATCGCAGGAGAA CTGCCG-GGCGAACCGCGCGGT GTTG ACCGCGCG-CTCGACGCGGCGG CCGATCCGCAGGAAG TERM 3028 4246349 - 4246310 - G 73 -14.2 -3.14344 | gap 1, opp_overlap 4246336 CAGCGGCGGCAGGAA GCCGAGCAGCGAGCGCGCT TCG AGCACGC-CGGAGCCCGGC ATGTTGGCGACCACG RPA3754 4250762 - 4247367 - | transglutaminase-like domain-containing protein hpcH 4251790 - 4251014 - | HpcH/HpaI aldolase RPA3756 4253059 - 4251974 - | malate dehydrogenase-like protein RPA3757 4253639 - 4253100 - | MarR family transcriptional regulator TERM 3029 4254600 - 4254552 - g 71 -3.1 -4.63218 | gap 3, opp_overlap 4254574 4254575 4254577, overlap 4254553 GGCTCGCCAACAAAA TCGCGCC-GCAGGGCCTGGCGCTG GAGC CAG-GCCAGATCGTGCTGGC-CGG CTCGTTCATTCGCGC hpcG 4253885 - 4254691 + | 2-oxo-hepta-3-ene-1,7-dioate hydratase hpcD 4254712 - 4255110 + | putative 5-carboxymethyl-2-hydroxymuconate isomerase TERM 3030 4256235 - 4256204 - g 72 -8.6 -4.07885 | gap 1, opp_overlap 4256219 GACGTCGCCCGAAAA GACGGCGCCACCATC GCG GTCGGCGGCGC-GCC CTTCGACGGCCCAGG hpcC 4255103 - 4256644 + | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase RPA3761 4256841 - 4257818 + | putative catechol 2,3-dioxygenase RPA3762 4257949 - 4258821 + | putative 2-oxo-3-ene-1,7-dioic acid hydratase TERM 3031 4259808 - 4259789 - g 70 -10.6 -3.59979 | opp_overlap 4259795 GTGTCGGATTCGAAA GCCGGCGC CCGC GCGCTGGC CGATGCGGTGAGCAA TERM 3032 4259878 - 4259846 - g 70 -8.9 -4.01603 | overlap 4259824 4259839 4259847 TATTCAAAGACGAAA GGCCGCCGCGAGGCG ATC CGCGCCGCCACGGCG AAGACGCAGCAGGAC TERM 3033 4260411 - 4260380 - g 81 -8.6 -4.56597 | gap 1 CCCGCGTTGGAAAAA GCGCTC-GCCGCCGG CGG CCCGCAGCTGATCGC GATCGACGTCCCGCG ilvB 4258850 - 4260475 + | hypothetical protein RPA3764 4261754 - 4260666 - | phenylacetate-CoA oxygenase/reductase, PaaK subunit paaD 4262266 - 4261763 - | phenylacetate-CoA oxygenase, PaaJ subunit paaC 4263036 - 4262260 - | phenylacetate-CoA oxygenase, PaaI subunit TERM 3034 4263091 - 4263114 + r 93 -18.2 -3.3382 | GCGGCGGGCGGTCTC CCTCTCCCCG CGCG CGGGGAGAGG TTAGTCTGTGCTCGG TERM 3035 4263178 - 4263160 - R 77 -14.6 -2.94099 | opp_overlap 4263159 CCCGCTCACTACATA TGCCCGAC TTC GTCGGGCA CTTCGTAGAACGTCG paaB 4263440 - 4263153 - | phenylacetate-CoA oxygenase subunit PaaB paaA 4264596 - 4263613 - | phenylacetate-CoA oxygenase subunit PaaA RPA3769 4264719 - 4265399 + | TetR family transcriptional regulator TERM 3036 4265524 - 4265473 - T 100 -20.3 -3.72087 | opp_overlap 4265474 4265484 AGCAACGCAACACAA CCTCGG-GATTCCGGGTTCGCTCGC TTTC GCGAGCGC-CCCGGAATGACCGAGG TGAGGCCGACGGGTT TERM 3037 4265573 - 4265556 - T 100 -14.1 -5.04249 | CCCCCAAAAAAGAAA GGCCCGC GCGA GCGGGCC GAGGTCGGGAGGAAC RPA3770 4266137 - 4265634 - | phasin 2 TERM 3038 4266253 - 4266214 - R 89 -13 -4.16101 | opp_overlap 4266217, overlap 4266215 4266217 AAAATATGACATAAA CCATGTTGCATTGCAACA TCAT TGCCGCAATGCAACACGC AATAACCCATAAATC TERM 3039 4266252 - 4266215 - R 84 -16.5 -3.08034 | opp_overlap 4266217, overlap 4266214 4266217 AAATATGACATAAAC CATGTTGCATTGCAACA TCAT TGCCGCAATGCAACACG CAATAACCCATAAAT TERM 3040 4266250 - 4266217 - R 81 -15.5 -3.08278 | opp_overlap 4266217, overlap 4266215 4266214 ATATGACATAAACCA TGTTGCATTGCAACA TCAT TGCCGCAATGCAACA CGCAATAACCCATAA RPA3771 4266669 - 4266349 - | hypothetical protein RPA3772 4267509 - 4266718 - | hypothetical protein TERM 3041 4266808 - 4266780 - G 77 -15.9 -3.03159 | overlap 4266769 CGAACGGTTTGAAGA CGCCCTCCGGCTG CGC CAGCCGGTCGGCG ATCGCCCACAGCACC TERM 3042 4267447 - 4267426 - G 75 -11.5 -3.68222 | GTTGAATTCGAAGAA GCTGCGCGC CTCG GCGAGCAGC AGCGCGACACTCGGC RPA3773 4267782 - 4267528 - | hypothetical protein RPA3774 4269126 - 4267873 - | D-amino-acid dehydrogenase TERM 3043 4269354 - 4269375 + r 93 -17.3 -3.40073 | opp_overlap 4269354 GCGCAAAAAGGAAAA TGGCGGGCC GATC GGCCCGCCA TTGGTTGGTCGGAAT TERM 3044 4269375 - 4269354 - R 100 -17.3 -4.77757 | opp_overlap 4269354 GCGCAAAAAGGAAAA TGGCGGGCC GATC GGCCCGCCA TTGGTTGGTCGGAAT RPA3775 4272509 - 4269405 - | acriflavin resistance protein TERM 3045 4269637 - 4269588 - G 70 -11.9 -3.35996 | gap 1 GAGGCCGATCGAGAA CCGGCTTGCCGCGCCGGCGC-CCG AAG CGGTGAGCAGCGGCAGCAGGCCGG TCACCATCGCGGCCG TERM 3046 4272646 - 4272607 - R 71 -12.6 -3.07816 | opp_overlap 4272633 4272635 GCCGGACCTATTCAA TGGCGAGCGGGCCGCGCC GAAG GGCGCAGCCGGCGCTCCG GCTATTAGTAACGCG RPA3776 4273844 - 4272651 - | RND efflux membrane fusion protein precursor TERM 3047 4273637 - 4273658 + g 84 -9.3 -4.44667 | TCTTCGCCTCGGCGA CCGTCACCG TGAT CGGCGGCGG TTTGTTGTTGGCGAA TERM 3048 4273766 - 4273794 + g 77 -13.7 -3.35996 | opp_overlap 4273761 4273764 CGATGATGAACCAGC GCACCGTCCGCAC CGG GCGCGGGCGGGGC TTCTCGCTGGAGCTC RPA3777 4274547 - 4273846 - | TetR family transcriptional regulator RPA3778 4274767 - 4275987 + | putative cytochrome p450-like enzyme TERM 3049 4277099 - 4277089 - g 72 -8.2 -4.15222 | overlap 4277096 4277097 ACCGCGGCGAAGAAA GCGG AAA CCGC GAAGCTCGCGACCGA RPA3779 4276159 - 4277718 + | hypothetical protein TERM 3050 4277711 - 4277738 + T 70 -12.1 -3.14344 | gap 1, opp_overlap 4277685 AGGAGCAGCCGGGCT GGTG-GTAGCGC CTGCC GCGCTACGCACC TTCCTCCGCCGCCTC RPA3780 4278602 - 4277730 - | hypothetical protein yihV 4278937 - 4279830 + | PfkB RPA3782 4281151 - 4279934 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 3051 4280218 - 4280264 + g 93 -18.6 -3.29144 | opp_overlap 4280242 CGTCATACGGTTTGG CATCGCCGGTCAGCCGCGCAGC AAC GCAGCGCGCCTGATCGGTGGCG TTCTGCACCGACTCC RPA3783 4282772 - 4281276 - | glycosyl transferase family protein TERM 3052 4281390 - 4281356 - G 70 -6.3 -4.2828 | gap 1 CCGCATCGACCAAAA GCGGGCC-ACGCGAGC GGGT GACCGCACCGACCCGC TCGATCCTGCCGAAC TERM 3053 4281700 - 4281656 - G 71 -12.2 -3.25823 | gap 2, opp_overlap 4281691 TCTGCGGCACACCAA CGCCGACCGACCGTACCGTCGC ATC GCGCCGATA-G-CCGGTCAGCG CGCCGGTGTTCACCT RPA3784 4283916 - 4282780 - | dolichyl-phosphate beta-D-mannosyltransferase TERM 3054 4283506 - 4283529 + g 71 -14.6 -2.55351 | opp_overlap 4283503, overlap 4283505 GCCTTCGATATAGCG GCTGCCGATC ACGA GATCGGCGGC GTTGCTCTCCAGCAG TERM 3055 4284029 - 4284019 - H 78 -6.8 -4.56775 | ACGGTGGCCCAAAAA GGTC AAC GACC ACGAACAACAGGTGC RPA3785 4284169 - 4284975 + | hypothetical protein RPA3786 4285121 - 4285378 + | hypothetical protein RPA3787 4285476 - 4286378 + | hypothetical protein RPA3788 4287583 - 4286411 - | putative ABC transporter, ATP-binding protein RPA3789 4288533 - 4287580 - | putative ATP-binding component of a transport system RPA3790 4289333 - 4288530 - | putative efflux protein TERM 3056 4289026 - 4289063 + g 70 -9.8 -3.66178 | overlap 4289028 4289031 GCCTGAGTGCCGGAA CCGGTCTTCGACAGCG ATTGAG CGCGGTCGAAGGTCTG TTTGGCGTTGGCGAG RPA3791 4290046 - 4289330 - | TetR family transcriptional regulator RPA3792 4291256 - 4290117 - | putative diguanylate cyclase (GGDEF) RPA3793 4292054 - 4291644 - | hypothetical protein RPA3794 4292460 - 4292116 - | hypothetical protein RPA3795 4293361 - 4292609 - | putative enoyl-CoA hydratase TERM 3057 4294260 - 4294235 - g 70 -8.9 -3.92542 | overlap 4294236 CTGATCTGGAAACAA CCTGCCGGCGC CAAG GCGGCGGCAAA GCTCGCGACGCGGCT RPA3796 4293461 - 4294291 + | LysR family transcriptional regulator RPA3797 4295904 - 4294303 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase RPA3798 4296602 - 4295901 - | xanthine dehydrogenase accessory factor TERM 3058 4296553 - 4296573 + g 73 -13.9 -3.20723 | opp_overlap 4296547 ACCACGATAGCCGGG CGCCGCGCG GCG CGCTCGGCG TTGAGTTGCTGCAGG RPA3799 4296959 - 4296633 - | hypothetical protein RPA3800 4298212 - 4296995 - | VWA domain CoxE-like family protein TERM 3059 4297842 - 4297889 + g 100 -13.2 -5.06414 | gap 1, overlap 4297841 GGCATGTCGCGCGTC GCCGCCGGCGACATCGCCTCCTG CAC CCGGCG-CGAGGCCGGCGGCGGC TTTTTCTTGGCGGCG RPA3801 4299440 - 4298538 - | ATPase RPA3802 4300266 - 4299460 - | carbon monoxide dehydrogenase medium subunit RPA3803 4300827 - 4300342 - | carbon-monoxide dehydrogenase small subunit RPA3804 4301467 - 4301003 - | hypothetical protein RPA3805 4302190 - 4301663 - | hypothetical protein TERM 3060 4302436 - 4302401 - H 100 -14.6 -4.22652 | opp_overlap 4302405, overlap 4302402 4302409 CGACACCATCGAAAA TGCCGAAAGCCCCGCC GTGG GGCGGGGCTCCCTGCT GTCGCTTCGCGACGC TERM 3061 4302435 - 4302402 - H 91 -18.1 -3.13109 | opp_overlap 4302405, overlap 4302401 4302409 GACACCATCGAAAAT GCCGAAAGCCCCGCC GTGG GGCGGGGCTCCCTGC TGTCGCTTCGCGACG TERM 3062 4302428 - 4302409 - H 91 -16.4 -3.66666 | opp_overlap 4302405, overlap 4302402 4302401 TCGAAAATGCCGAAA GCCCCGCC GTGG GGCGGGGC TCCCTGCTGTCGCTT livH 4303024 - 4303941 + | inner-membrane translocator TERM 3063 4303984 - 4304012 + G 79 -11 -3.92324 | overlap 4303989 CACGCCGCTGCTGCC CCGGTCGCCG-CCG CCA CGGTCGGCG-TCGG TTTCATCTTCAAGAA TERM 3064 4304036 - 4304056 + G 100 -10.4 -5.10933 | opp_overlap 4304029, overlap 4304037 TCAAGAAAGCCCTGA TCAGCGCC CTCGT GGCGCTGG TTTTATTTTCGCTGA TERM 3065 4304037 - 4304055 + G 75 -11.7 -3.65475 | opp_overlap 4304029, overlap 4304036 CAAGAAAGCCCTGAT CAGCGCC CTCGT GGCGCTG GTTTTATTTTCGCTG livM 4303954 - 4305285 + | inner-membrane translocator livG 4305282 - 4306118 + | branched chain amino acid ABC transporter ATP-binding protein TERM 3066 4306393 - 4306411 + G 72 -8.2 -4.07568 | overlap 4306361 AATGGCGCCGGCAAG TCGACATT GAT GATGTCGA TTTTCGGCAAGCCGC livF 4306255 - 4306995 + | branched chain amino acid ABC transporter ATP-binding protein livK 4307174 - 4308280 + | extracellular ligand-binding receptor TERM 3067 4308352 - 4308323 - T 86 -15.8 -3.64487 | gap 1 TCACACCGGCAACAA CGGCATGCGCGGG CTCGC CCCGCGCAT-CCG CTCACGGACAAAGAA TERM 3068 4308491 - 4308462 - T 73 -7.1 -4.27117 | gap 1, overlap 4308463 CCTCCACAAGACAAA CGTCATGCGCGGGC TTG ACCCGCGCATC-CA TCAACGAATGATTTC RPA3811 4308779 - 4308492 - | excinuclease ABC subunit C RPA3812 4309792 - 4309058 - | cytochrome c biogenesis protein, transmembrane region RPA3813 4309894 - 4310943 + | T4 family peptidase RPA3814 4311854 - 4311084 - | calcium-binding EF-hand cbbE 4312124 - 4312822 + | ribulose-phosphate 3-epimerase RPA3816 4313380 - 4312829 - | hypothetical protein TERM 3069 4312876 - 4312866 - G 72 -6.8 -4.24948 | overlap 4312867 TGACGACAGGCAAAA GTGC GTA GCAC AGTGCCAGGTGGGAC purB 4313465 - 4314772 + | adenylosuccinate lyase TERM 3070 4314807 - 4314825 + T 100 -13.1 -4.7497 | opp_overlap 4314807 ATAGCTCAACAAAAA GCCCCCG GTTTG CGGGGGC TTTTTCATGGCTGCG TERM 3071 4314825 - 4314807 - T 100 -13.1 -5.09204 | opp_overlap 4314807 ATAGCTCAACAAAAA GCCCCCG GTTTG CGGGGGC TTTTTCATGGCTGCG purL 4315720 - 4315019 - | phosphoribosylformylglycinamidine synthase I RPA3819 4316016 - 4315777 - | hypothetical protein RPA3820 4316285 - 4316040 - | phosphoribosylformylglycinamidine synthase subunit PurS TERM 3072 4316411 - 4316363 - R 71 -14 -2.52464 | gap 1, opp_overlap 4316334 4316335, overlap 4316368 4316392 CGCTCGCGCAAGCGA GCGAACCCGGAATCTCGATCGTT CTAT AACC-TCTGGATTCCGGGTTCGC CGCTGCGCGGCGCCC purC2 4317234 - 4316467 - | phosphoribosylaminoimidazole-succinocarboxamide synthase RPA3822 4317533 - 4317856 + | hypothetical protein TERM 3073 4317862 - 4317891 + F 75 -14.9 -2.79291 | opp_overlap 4317838, overlap 4317859 CGGAACCTGATGGGT TCCCGCCGGCCGC CGCG GCGGCCGGCCTGA TGCTTGATCGAATTT TERM 3074 4317906 - 4317938 + F 93 -14.2 -4.08064 | opp_overlap 4317912, overlap 4317908 4317912 ATGCTTGATCGAATT TTCAAATGCCCGGG CCTGT CCCGGGCATTTGTG TTTTCGGCGCAGGTT TERM 3075 4317908 - 4317936 + F 100 -19 -3.63744 | opp_overlap 4317912, overlap 4317906 4317912 GCTTGATCGAATTTT CAAATGCCCGGG CCTGT CCCGGGCATTTG TGTTTTCGGCGCAGG TERM 3076 4317932 - 4317912 - f 81 -14 -3.61268 | opp_overlap 4317912 4317908 4317906 GATCGAATTTTCAAA TGCCCGGG CCTGT CCCGGGCA TTTGTGTTTTCGGCG TERM 3077 4317912 - 4317932 + F 100 -14 -4.45168 | opp_overlap 4317912, overlap 4317908 4317906 GATCGAATTTTCAAA TGCCCGGG CCTGT CCCGGGCA TTTGTGTTTTCGGCG TERM 3078 4318903 - 4318890 - g 73 -9.5 -3.91897 | overlap 4318871 4318870 CGGCTCACCCAGAAA GGGCG CGGC CGCCC TGGCAAACCTGGCCC RPA3823 4318428 - 4319102 + | hypothetical protein RPA3824 4320344 - 4319994 - | hypothetical protein TERM 3079 4320022 - 4320039 + g 100 -14.1 -4.59773 | ACGCTGATCCGGGCC GCCGCGC GCGA GCGCGGC TTTTTGCGGATAACG RPA3825 4321281 - 4320433 - | hypothetical protein TERM 3080 4321674 - 4321703 + H 72 -13.7 -2.79831 | TGGAGGGCGCACTGG ACCGATGGTAACA TATA TGTTACCATCGGC TATGCTGGACGTTCG RPA3826 4321678 - 4322034 + | hypothetical protein RPA3827 4322038 - 4322361 + | hypothetical protein RPA3828 4322486 - 4322683 + | XRE family transcriptional regulator TERM 3081 4323611 - 4323625 + T 70 -10 -3.59979 | CTCCTGATATTGGCT CGGCAA TCT TTGCCG TTTGGCCTCGCGACA RPA3829 4324238 - 4323708 - | transcription elongation factor regulatory protein RPA3830 4324745 - 4324251 - | G/U mismatch-specific DNA glycosylase RPA3831 4325186 - 4324785 - | hypothetical protein RPA3832 4326351 - 4325281 - | diguanylate cyclase rrm2 4327668 - 4326454 - | tRNA/rRNA methyltransferase TERM 3082 4326946 - 4327000 + g 72 -8.4 -4.07568 | GTGCATGTCCTGCTT GCTCGGCTCCATCCGGGTGAAGATGT TGC GCAGGTTCACCAGCATGGTGTCGCGC TTTTCCGGCGGGCGG TERM 3083 4327700 - 4327672 - H 95 -11 -4.57073 | gap 1, overlap 4327673 4327674 CAGGTCTTTCAAAAA CGGGCGCCTCGGA GTGA TCCGAGGCGGC-G CTGGAGGATCGGGGG TERM 3084 4327699 - 4327674 - H 74 -14.7 -2.60032 | overlap 4327672 4327673 GGTCTTTCAAAAACG GGCGCCTCGGA GTGA TCCGAGGCGGC GCTGGAGGATCGGGG TERM 3085 4327754 - 4327719 - H 77 -12.5 -3.54741 | gap 1, opp_overlap 4327724, overlap 4327723 GAGGATCGGGGGAAA GCGACGGCGCGCGGCC CGGAC AGCGGCG-GCCGCCGC GCCTTTCCGTTGCCA TERM 3086 4327724 - 4327757 + H 78 -12.4 -3.75153 | gap 2, opp_overlap 4327719 4327723 TCGGGGGAAAGCGAC GGCGC-GCGGCC-CGG ACAG CGGCGGCCGCCGCGCC TTTCCGTTGCCAAGG TERM 3087 4327892 - 4327844 - H 83 -16.6 -2.87211 | gap 2 AGTGCGCTTGACACA GCGCGCGCCCACCGCGCTTCCGGC CGC GGCGGT-GCGCG-CGGCCGCGCGC TTGCCGAGCCATGCG TERM 3088 4328690 - 4328675 - g 75 -3.2 -4.72272 | overlap 4328677 TTTGTCGACCAAAAA CACCAT CATG AAGGTG TACGATGGCCGCTTC idh 4328043 - 4329269 + | isocitrate dehydrogenase TERM 3089 4329316 - 4329296 - T 100 -14 -4.81249 | opp_overlap 4329296 TCGCAAAGTCAAAAA GGCGCGGA TGCCC TCCGCGCC TTTTTCTTTGTGATC TERM 3090 4329296 - 4329316 + T 100 -14 -5.40464 | opp_overlap 4329296 TCGCAAAGTCAAAAA GGCGCGGA TGCCC TCCGCGCC TTTTTCTTTGTGATC TERM 3091 4329372 - 4329430 + T 100 -19.7 -4.14472 | opp_overlap 4329375 4329388, overlap 4329373 4329375 4329421 TAGTGGCACTCTGAA TGATCGTGCCCATCAACTGGATCATCA TCTTC TGTTGTTCCAGTTGCTGGGCGCGATCC TTTTCCGCCTGTTCC TERM 3092 4329373 - 4329429 + T 100 -23.2 -3.08201 | opp_overlap 4329375 4329388, overlap 4329372 4329375 4329421 AGTGGCACTCTGAAT GATCGTGCCCATCAACTGGATCATCA TCTTC TGTTGTTCCAGTTGCTGGGCGCGATC CTTTTCCGCCTGTTC RPA3835 4330659 - 4329349 - | hypothetical protein TERM 3093 4329427 - 4329375 - G 85 -17.8 -2.72344 | opp_overlap 4329375 4329373 4329372 4329421, overlap 4329388 TGGCACTCTGAATGA TCGTGCCCATCAACTGGATCATCA TCTTC TGTTGTTCCAGTTGCTGGGCGCGA TCCTTTTCCGCCTGT TERM 3094 4329375 - 4329427 + g 100 -20 -3.09272 | opp_overlap 4329375 4329388, overlap 4329373 4329372 4329421 TGGCACTCTGAATGA TCGTGCCCATCAACTGGATCATCA TCTTC TGTTGTTCCAGTTGCTGGGCGCGA TCCTTTTCCGCCTGT RPA3836 4332532 - 4331612 - | integrase catalytic subunit RPA3837 4332795 - 4332529 - | insertion element ISR1 RPA3838 4333101 - 4333433 + | hypothetical protein pchR 4333604 - 4334443 + | transcriptional regulator PchR RPA3840 4334584 - 4336893 + | putative hydroxamate-type ferrisiderophore receptor RPA3841 4336914 - 4337444 + | hypothetical protein TERM 3095 4337735 - 4337781 + G 79 -16.5 -3.07787 | gap 1, opp_overlap 4337716, overlap 4337717 4337743 4337772 CCGGGTGCGGGATTC CTGCCCGGCGACGCGGCGATCG TATT CGGTCGCC-TGCCGCCGGGCGA TCTTGGCGTGGTATT RPA3842 4337441 - 4338550 + | hypothetical protein kefC 4340313 - 4338580 - | potassium efflux system protein TERM 3096 4339259 - 4339208 - G 86 -18 -2.82516 | gap 1 CCGGCCAGCACCAGA TCGCGGCCGCGCTCCGGCATCAGCC CGA GGCTGACGCC-GAGCCCGGCGAGGA TGAAAGAGAACTCGC TERM 3097 4339594 - 4339546 - G 70 -11 -3.61715 | overlap 4339530 4339575 4339578 CATGCCGGCGAAGAA CGCGCCGAGCGCGAGCGATAC-GT CGA ACAGCACCGC-CGCGCCGAACGCG ACGCCGAGCGAGATC TERM 3098 4340277 - 4340261 - G 72 -7.2 -4.29176 | ACACCGAAGGCAAAA GCCAGC ACCAA GCCGGC CACGATGGTGGAAAT TERM 3099 4341063 - 4341103 + G 74 -10.1 -3.76125 | overlap 4341076 GTTCGGCAAGGCGGC CGGCGATGCAGCGGGCGGC GGC GCGGCCAGCACCGGCGCCG TTTGGCTTGGGCTCG kefB 4340497 - 4342275 + | sodium/hydrogen exchanger RPA3845 4342505 - 4344463 + | membrane transporter RPA3846 4345320 - 4344559 - | GCN5-related N-acetyltransferase alaS 4347991 - 4345322 - | alanyl-tRNA synthetase TERM 3100 4349267 - 4349247 - g 77 -13.9 -3.35679 | opp_overlap 4349252, overlap 4349249 CTGGTCGATCCAGAA GAGCCGCCG CAG CGGCGGCGC CCGTCCCGCCGGCTT TERM 3101 4349265 - 4349249 - g 78 -15.1 -3.24924 | opp_overlap 4349252, overlap 4349247 GGTCGATCCAGAAGA GCCGCCG CAG CGGCGGC GCCCGTCCCGCCGGC TERM 3102 4349420 - 4349475 + G 86 -18.2 -2.87931 | gap 1, opp_overlap 4349380 CGGCCGAGCCGGTCG GCACCGTCACCTCCGGCGGCTTCGGGC CGA GCCTGAACGCGCCGGTGGCGATGG-GC TATGTGCCGGCTGCG TERM 3103 4349502 - 4349512 + G 79 -6.8 -4.57569 | TGCGCTGACTGCGCG CGAC ACC GTCG TTTTTGCCGAAGTAC gcvT2 4348444 - 4349592 + | glycine cleavage system aminomethyltransferase T RPA3849 4349602 - 4349967 + | glycine cleavage system H protein gcvP 4350069 - 4353041 + | glycine dehydrogenase TERM 3104 4353452 - 4353489 + T 74 -12.5 -3.38072 | GCGATTCACCGGTCG GGAGGGATGCGGCCGGT ACGA GCCGGCCGCGACCGACC TTACTCTTCCATCGG recA 4354581 - 4353490 - | recombinase A RPA3852 4355564 - 4354998 - | hypothetical protein RPA3853 4355837 - 4356952 + | hypothetical protein RPA3854 4357103 - 4357480 + | hypothetical protein RPA3855 4357821 - 4358735 + | hypothetical protein RPA3856 4358739 - 4359098 + | hypothetical protein RPA3857 4361286 - 4359262 - | esterase/lipase/outer membrane autotransporter TERM 3105 4360555 - 4360510 - G 70 -10.9 -3.53563 | gap 1, overlap 4360498 4360496 ATAGGTGTGGGCAAA GGCGTC-GCGGGCGGCGTCGCC GAT GGCCCCACCGCCCTCCGGCACC GGAAAGTACTTGGAA RPA3858 4361678 - 4361935 + | hypothetical protein RPA3859 4362348 - 4361953 - | hypothetical protein RPA3860 4362408 - 4362581 + | hypothetical protein TERM 3106 4362685 - 4362721 + F 100 -10.2 -5.28176 | gap 1, overlap 4362677 4362687 GAGTTTCGACCGTGA C-CGGAGCCCCGAAC ACGGCCTC GTTCGGGGCTCCTTG TTTTTTGTGGGTGGA TERM 3107 4362687 - 4362718 + F 100 -17.4 -4.73105 | overlap 4362677 4362685 GTTTCGACCGTGACC GGAGCCCCGAAC ACGGCCTC GTTCGGGGCTCC TTGTTTTTTGTGGGT RPA3861 4362966 - 4363352 + | hypothetical protein TERM 3108 4363415 - 4363373 - T 84 -14 -3.7791 | opp_overlap 4363382, overlap 4363374 4363376 CAAGGATTGAGCAAA CCAGCACAGGCCGCCGGCGT CCG ACGTCGGCGGCTTTTGCCGT TCAGGATCAGCGGCT TERM 3109 4363414 - 4363374 - T 87 -17.5 -2.86264 | opp_overlap 4363382, overlap 4363373 4363376 AAGGATTGAGCAAAC CAGCACAGGCCGCCGGCGT CCG ACGTCGGCGGCTTTTGCCG TTCAGGATCAGCGGC TERM 3110 4363412 - 4363376 - T 84 -16.5 -2.97667 | opp_overlap 4363382, overlap 4363374 4363373 GGATTGAGCAAACCA GCACAGGCCGCCGGCGT CCG ACGTCGGCGGCTTTTGC CGTTCAGGATCAGCG TERM 3111 4363382 - 4363406 + T 100 -19.3 -4.19238 | opp_overlap 4363376 4363374 4363373 AGCAAACCAGCACAG GCCGCCGGCGT CCG ACGTCGGCGGC TTTTGCCGTTCAGGA RPA3862 4363834 - 4363538 - | hypothetical protein TERM 3112 4363811 - 4363784 - G 85 -6.1 -4.96501 | opp_overlap 4363785, overlap 4363786 GGCGACAAAAAGAAA TAGCCGGCGCG CAAGCT CGCGCCGCCCT GTTAGGCGTCGCGCA TERM 3113 4363809 - 4363786 - G 81 -10.9 -4.09508 | opp_overlap 4363785, overlap 4363784 CGACAAAAAGAAATA GCCGGCGCG CAAGCT CGCGCCGCC CTGTTAGGCGTCGCG RPA3863 4364614 - 4363862 - | Crp/FNR family transcriptional regulator TERM 3114 4364204 - 4364252 + g 82 -17.5 -3.01924 | CATCGCCGGCTCGCG CTGCAGCGTCGCCATCATCGTCG CAT TGGTGATGCTGGTGACGGTGCAG TCTTCCAGCGCGATC RPA3864 4364954 - 4364688 - | hypothetical protein RPA3865 4365165 - 4365713 + | thioesterase superfamily protein RPA3866 4367363 - 4365768 - | hypothetical protein RPA3867 4367449 - 4368609 + | hypothetical protein RPA3868 4369275 - 4368610 - | DSBA oxidoreductase RPA3869 4370169 - 4369348 - | XRE family transcriptional regulator TERM 3115 4370602 - 4370627 + G 72 -4.6 -4.4891 | overlap 4370606 CTGCTCAGCGGCATG GTCGCGCCGA ATGCGC TCGGCGTTGC TTTTGTGCTGATACA RPA3870 4370305 - 4370718 + | hypothetical protein TERM 3116 4370859 - 4370906 + T 74 -9 -3.92324 | gap 1, overlap 4370892 GGCTGCCTTGGATTT GC-TCGCAGCCGTCTTACGCGAC GAC GTCGTCTTGGCCGGCTGCGCCGC TTTGGTCTTACCGGC mes-4 4371578 - 4370841 - | nuclear protein SET RPA3872 4371720 - 4372349 + | hypothetical protein RPA3873 4372500 - 4373093 + | hypothetical protein RPA3874 4373811 - 4373101 - | hypothetical protein RPA3875 4374071 - 4374367 + | hypothetical protein TERM 3117 4374400 - 4374454 + T 71 -10.8 -3.41878 | gap 3, overlap 4374374 4374402 GCAGCGCACCTGCCC CA-AGCGGTGATTCCGGG-GCGCTCGC GTCA GCGAGCGAGCCCGGAATC-CCGAGATG TTCTGCGTTGAACCG TERM 3118 4374402 - 4374451 + T 71 -13.6 -2.56539 | overlap 4374374 4374400 AGCGCACCTGCCCCA AGCGGTGATTCCGGG-GCGCTCGC GTCA GCGAGCGAGCCCGGAATC-CCGAG ATGTTCTGCGTTGAA fumA 4376214 - 4374559 - | fumarate hydratase, class I RPA3877 4378049 - 4377765 - | hypothetical protein RPA3878 4378147 - 4378641 + | hypothetical protein TERM 3119 4378724 - 4378697 - f 85 -15 -3.63805 | gap 1 ATCCCACAGTCCAAA GC-CCGGCATTTG AAG CAAATGCCGGCGC AGGGGTGCGCGCAAA TERM 3120 4378991 - 4378979 - f 70 -10.5 -3.54543 | overlap 4378954 4378952 ATCCAGCCGCCGAAA GCGGC GCT GCCGC CCGGACAGGGCACTC TERM 3121 4379061 - 4379079 + F 81 -13.1 -3.74749 | opp_overlap 4379055, overlap 4379055 TCCGAACGACGACTG GCCCCGC CTCGC GCGGGGC TTTGGCGTTTGTGCT RPA3879 4379170 - 4379529 + | hypothetical protein TERM 3122 4379573 - 4379630 + T 70 -10.6 -3.64703 | gap 1, opp_overlap 4379547 4379542 4379574 4379615, overlap 4379547 4379544 4379574 CGGGGCGCGCGTGAA ACGCGCGAACCCGGAATCTCGAAGTGG TATGC TCGGATC-AGATTCCGGGTTCGCGAGC TTTCGCTCGCGCCCA TERM 3123 4379629 - 4379574 - T 71 -11.2 -3.53012 | gap 1, opp_overlap 4379547 4379544 4379573 4379574, overlap 4379547 4379542 4379615 GGGGCGCGCGTGAAA CGCGCGAACCCGGAATCTCGAAGTG GTATGCT CGGATC-AGATTCCGGGTTCGCGAG CTTTCGCTCGCGCCC TERM 3124 4379574 - 4379629 + T 72 -14.1 -2.78679 | gap 1, opp_overlap 4379547 4379542 4379574 4379615, overlap 4379547 4379544 4379573 GGGGCGCGCGTGAAA CGCGCGAACCCGGAATCTCGAAGTGG TATGC TCGGATC-AGATTCCGGGTTCGCGAG CTTTCGCTCGCGCCC RPA3880 4380398 - 4379688 - | glutathione S-transferase P subunit TERM 3125 4380489 - 4380467 - R 100 -20.6 -5.46657 | opp_overlap 4380467 GAGCCTAACAAAAAA GCGCCGCGGA AGG TCCGCGGCGC TTCGATGCTGGATCG TERM 3126 4380467 - 4380489 + r 93 -20.6 -3.10164 | opp_overlap 4380467 GAGCCTAACAAAAAA GCGCCGCGGA AGG TCCGCGGCGC TTCGATGCTGGATCG RPA3881 4381532 - 4380519 - | import inner membrane translocase, subunit Tim44 cckA 4384519 - 4381871 - | sensor histidine kinase TERM 3127 4382842 - 4382894 + g 75 -14.3 -3.28416 | gap 3, opp_overlap 4382849, overlap 4382846 4382849 GCAGTGTTTGTTTGC GCGAGAACGCCAGCAGCTGCCGC-AC CAAG GTCGCGGC-GCGGGTGGCGTTCT-GC TTGATCTGCATGATG TERM 3128 4382846 - 4382891 + g 73 -14.8 -2.82023 | opp_overlap 4382849, overlap 4382842 4382849 TGTTTGTTTGCGCGA GAACGCCAGCAGCTGCCGC-AC CAAG GTCGCGGC-GCGGGTGGCGTTC TGCTTGATCTGCATG TERM 3129 4382849 - 4382888 + g 70 -10.7 -3.55487 | opp_overlap 4382849, overlap 4382846 4382842 TTGTTTGCGCGAGAA CGCCAGCAGCTGCCGC-AC CAAG GTCGCGGC-GCGGGTGGCG TTCTGCTTGATCTGC TERM 3130 4383532 - 4383551 + g 71 -2.7 -4.62783 | opp_overlap 4383523, overlap 4383525 GATACAGCCGCACCG GCACGGT CTGGCC GCCGCGC TTTTTCAGGTCGATG TERM 3131 4384367 - 4384414 + g 71 -9.6 -3.78124 | gap 1, opp_overlap 4384352 4384362 4384349, overlap 4384366 CAGCGCAATACTGCC GCCGCGGC-GGGCCGGCTCCGGC GAC GCCGGACGCGGCTCGGGCGAAGC TTGTTGATCGTTGAT flhB 4385696 - 4384623 - | flagellar biosynthesis protein FlhB fliR 4386490 - 4385723 - | flagellar biosynthesis protein FliR fliQ 4386860 - 4386597 - | flagellar biosynthesis protein FliQ fliE 4387323 - 4387018 - | flagellar hook-basal body protein FliE flgC 4387784 - 4387359 - | flagellar basal body rod protein FlgC flgB 4388312 - 4387806 - | flagellar basal body rod protein FlgB RPA3889 4388533 - 4389687 + | hypothetical protein fliP 4389684 - 4390448 + | flagellar biosynthesis protein FliP TERM 3132 4390599 - 4390548 - T 76 -10.9 -3.79113 | AGCTGCGCACAACAA CCTTCA-GATTCCGGGTTCGCTCGC CTGC GCGAGCGC-CCCGGAATGACGGAGG AAAACAGCGAAGGAA RPA3891 4394346 - 4390618 - | hypothetical protein RPA3892 4394823 - 4395152 + | hypothetical protein RPA3893 4396705 - 4395182 - | putative carboxylesterase TERM 3133 4396390 - 4396361 - G 74 -7.8 -4.20084 | opp_overlap 4396388, overlap 4396362 ACCACCGACCGAAAA GCCGCCGCCGTA GATCCA TACGACGACGGG GCGAAGGTTGCCGCT RPA3894 4397354 - 4396731 - | TetR family transcriptional regulator RPA3895 4398296 - 4397532 - | hypothetical protein TERM 3134 4397606 - 4397620 + g 72 -11.4 -3.55563 | opp_overlap 4397583 GCGACGCCTTCCCGG TGGCGC GCC GCGCCA TTTCAACGGTGAGCT RPA3896 4398721 - 4398293 - | hypothetical protein TERM 3135 4398481 - 4398506 + g 73 -5.9 -4.42238 | overlap 4398482 GGTCGGAGAGCGCGG ACGCGGCGGCG ATGT CGCGGCCGAGG TTTTCGTTGACCTCG fliM 4399920 - 4398718 - | flagellar motor switch protein FliM fliL 4400427 - 4399927 - | flagellar basal body-associated protein FliL TERM 3136 4400345 - 4400300 - G 72 -5.1 -4.33153 | overlap 4400303 4400304 GCGAACAGGAAGAAA TAAGCGCCACCGCCGCCCAGC AGCA GCACGGCCGCCGCGGCGATAA TGATGATCAGCTTCT TERM 3137 4400342 - 4400303 - G 72 -6.8 -4.26924 | overlap 4400300 4400304 AACAGGAAGAAATAA GCGCCACCGCCGCCCAGC AGCA GCACGGCCGCCGCGGCGA TAATGATGATCAGCT flgF 4400792 - 4401553 + | flagellar basal body rod protein FlgF flgG 4401566 - 4402354 + | flagellar basal body rod protein FlgG flgA 4402367 - 4403395 + | flagellar basal body P-ring biosynthesis protein FlgA flgH 4403401 - 4404159 + | flagellar basal body L-ring protein TERM 3138 4404222 - 4404266 + T 79 -9.2 -4.18018 | gap 1, opp_overlap 4404180, overlap 4404223 CGCGGTCAGGTGTTC CAACGCGGCCTCC-TCCGG CTCTCCCT CCGGACGGAGGCCGCGGCC TTTTCAATGCCAGAC TERM 3139 4404223 - 4404265 + T 71 -12.7 -3.10597 | gap 1, opp_overlap 4404180, overlap 4404222 GCGGTCAGGTGTTCC AACGCGGCCTCC-TCCGG CTCTCCCT CCGGACGGAGGCCGCGGC CTTTTCAATGCCAGA TERM 3140 4404407 - 4404374 - T 73 -13.2 -3.14527 | gap 1, overlap 4404372 GAAGCTTCAGCAAGA CGTGGGATGCCCGGG ACGAG CCCGGGCAT-CCAGG AGCTGATAGCACCTA mexD3 4407572 - 4404420 - | RND multidrug efflux transporter MexD mexC3 4408778 - 4407585 - | putative RND multidrug efflux membrane fusion protein MexC precursor TERM 3141 4409355 - 4409344 - g 79 -2.2 -4.99861 | gap 1, overlap 4409346 GACGAAGTATAAAAA GACCG ACT CGG-C GCCGGCATTGGAGAT RPA3905 4408925 - 4409488 + | TetR family transcriptional regulator RPA3906 4409685 - 4409966 + | hypothetical protein TERM 3142 4410054 - 4410019 - T 100 -17.6 -4.7497 | opp_overlap 4410016, overlap 4410022 GCCAGCTACCAAAAA CAACGGCGCCGCTTCC TCTC GGAAGCGACGCCGTAA AACTTCGATCAGGCC TERM 3143 4410051 - 4410022 - T 100 -21.5 -4.4831 | opp_overlap 4410016, overlap 4410019 AGCTACCAAAAACAA CGGCGCCGCTTCC TCTC GGAAGCGACGCCG TAAAACTTCGATCAG dksA 4410504 - 4410076 - | transcriptional regulators, TraR/DksA family fliX 4411035 - 4410625 - | flagellar assembly regulator FliX TERM 3144 4411727 - 4411705 - g 73 -11.2 -3.65046 | GGGCGACGCCAAGAA CCTGCAGGGC GGC ACCCTGCTGG TCACCCCCCTCCTCG flgI 4411334 - 4412455 + | flagellar basal body P-ring protein RPA3910 4412452 - 4412790 + | chemotactic signal-response protein CheL RPA3911 4412808 - 4413299 + | hypothetical protein TERM 3145 4413620 - 4413573 - g 81 -16.2 -3.14463 | gap 1, overlap 4413594 AAGCGGCCGTACCAA CCGATCTGCCGGC-GCCACAGAG CGT CACCGCGGCAGACGGCGGATCGG CGACGACTGCCACCA RPA3912 4413479 - 4413850 + | hypothetical protein flaF 4414335 - 4413967 - | flagellar biosynthesis regulatory protein FlaF flbT 4414719 - 4414339 - | flagellar biosynthesis repressor FlbT RPA3915 4417595 - 4414935 - | flagellin TERM 3146 4419527 - 4419553 + G 73 -5.9 -4.36914 | CTGCTCGGAGACCCG GTGGCGATC CCGGTCGAA GATCGTCAC TTTTATGCCGAAGCG TERM 3147 4419839 - 4419809 - g 71 -9.7 -3.86524 | gap 2, opp_overlap 4419809 ACACTGCTGGAGAAA TTCGGCGCGCGCGGC ATC GCCGC-CG-GCCGCA TTACCTTGCTGGGCT TERM 3148 4420274 - 4420237 - g 78 -15.5 -3.20723 | gap 1, opp_overlap 4420246 GTTCGACGAAGCCAA GGACCGGGCC-CTGCGCC GCG GGCGCTGAGGCCCATTCC CGCTATACGCCCGCG RPA3916 4418117 - 4420264 + | TPR repeat-containing protein RPA3917 4422079 - 4420277 - | acetolactate synthase large subunit RPA3918 4422909 - 4422103 - | hypothetical protein RPA3919 4423826 - 4422906 - | mannose-1-phosphate guanyltransferase RPA3920 4425307 - 4423823 - | ADP-heptose synthase TERM 3149 4425247 - 4425259 + g 100 -10.5 -5.20216 | opp_overlap 4425239, overlap 4425238 CGAAAACGATGCTGC GCCGG CGT CCGGC TTTTTTCCTGATATC RPA3921 4426368 - 4425313 - | acetoin dehydrogenase (TPP-dependent) beta chain TERM 3150 4425738 - 4425758 + g 76 -8.2 -4.19238 | CGTCGATCACCGTGG TGGCGCCG AGCTC CGTCGCCA TTTTCAGCTTGGCAG TERM 3151 4426467 - 4426420 - R 100 -27.2 -3.06183 | opp_overlap 4426425 4426429, overlap 4426425 4426429 GTCACTGCGAGCGAA GCGAAGCAATCCAGGGGCTCCG TGCA CTGAGCCCCTGGATTGCTTCGT CGGCTTCGCCTCCTC TERM 3152 4426462 - 4426425 - R 100 -24.3 -3.19192 | opp_overlap 4426425 4426429, overlap 4426420 4426429 TGCGAGCGAAGCGAA GCAATCCAGGGGCTCCG TGCA CTGAGCCCCTGGATTGC TTCGTCGGCTTCGCC TERM 3153 4426425 - 4426462 + r 100 -24.3 -3.18681 | opp_overlap 4426420 4426425 4426429, overlap 4426429 TGCGAGCGAAGCGAA GCAATCCAGGGGCTCCG TGCA CTGAGCCCCTGGATTGC TTCGTCGGCTTCGCC TERM 3154 4426458 - 4426429 - R 95 -17.9 -3.40788 | opp_overlap 4426425 4426429, overlap 4426425 4426420 AGCGAAGCGAAGCAA TCCAGGGGCTCCG TGCA CTGAGCCCCTGGA TTGCTTCGTCGGCTT TERM 3155 4426429 - 4426458 + r 95 -17.9 -3.40639 | opp_overlap 4426429 4426425 4426420, overlap 4426425 AGCGAAGCGAAGCAA TCCAGGGGCTCCG TGCA CTGAGCCCCTGGA TTGCTTCGTCGGCTT RPA3922 4427571 - 4426519 - | putative acetoin dehydrogenase (TPP-dependent) beta chain RPA3923 4428559 - 4427582 - | putative acetoin dehydrogenase (TPP-dependent) alpha chain RPA3924 4429215 - 4428556 - | hypothetical protein RPA3925 4430261 - 4429224 - | putative dTDP-glucose 4,6-dehydratase RPA3926 4431196 - 4430258 - | putative sugar-nucleotide epimerase/dehydratase RPA3927 4432006 - 4431338 - | phosphoheptose isomerase RPA3928 4433091 - 4432129 - | hypothetical protein TERM 3156 4432220 - 4432237 + g 76 -8.3 -4.18197 | overlap 4432222 TCGGCCAGCGTCTCC GCCCGGC GCCA GCCGGTC TTTTGGGTGAACAGT TERM 3157 4432694 - 4432732 + g 78 -15.2 -3.31144 | overlap 4432695 CTGTGCAGACCGATG TTGCCGCCGATGTCGGCG ACG CGCCGATACCGGCCGCGG TTCTGCCAGTAGAAC TERM 3158 4432695 - 4432731 + g 77 -16.5 -2.58544 | overlap 4432694 TGTGCAGACCGATGT TGCCGCCGATGTCGGCG ACG CGCCGATACCGGCCGCG GTTCTGCCAGTAGAA TERM 3159 4433144 - 4433184 + r 93 -16.2 -3.74693 | gap 1, opp_overlap 4433153, overlap 4433153 GGCGGCAGCCGGAGC AGAAAGAAAGGCGGCGGGG TCGC CCCCGCCGCCTT-CTGTCG TTTGATCAGCTACGC TERM 3160 4433176 - 4433153 - R 100 -21 -4.59342 | opp_overlap 4433144 4433153 CGGAGCAGAAAGAAA GGCGGCGGGG TCGC CCCCGCCGCC TTCTGTCGTTTGATC TERM 3161 4433153 - 4433176 + r 100 -21 -3.65782 | opp_overlap 4433153, overlap 4433144 CGGAGCAGAAAGAAA GGCGGCGGGG TCGC CCCCGCCGCC TTCTGTCGTTTGATC RPA3929 4435871 - 4433205 - | flagellin TERM 3162 4436138 - 4436160 + r 81 -16.2 -2.7185 | opp_overlap 4436128 4436127, overlap 4436127 GAAATCGGTCGCCGC GGGGCCGCCG GAG CGGCGGCCCG TCGTTCAGAGATAAT RPA3930 4437786 - 4436179 - | hypothetical protein TERM 3163 4436609 - 4436644 + g 73 -13.3 -3.28924 | gap 1 TTGGCAACCGCGGTG CCGCGGGCCGGA-TCG CTCGC CGAGTCCGGCTCGCCG TTATACCAGAAGATC TERM 3164 4437306 - 4437328 + g 78 -14.8 -3.29381 | TCACCTGCTTCAGCC CGGCGACCGC CGC GCCGTCGCCG TTCATGATCTTGTCG flgK2 4439666 - 4437795 - | flagellar hook-associated protein TERM 3165 4438320 - 4438296 - G 100 -19.3 -3.05384 | overlap 4438298 GCCGTTGTCATTGAA CAGCGGCACCG ATG CGGTGCCGCCG GTCAGCGACGTCTCG TERM 3166 4438318 - 4438298 - G 86 -18.3 -3.08679 | overlap 4438296 CGTTGTCATTGAACA GCGGCACCG ATG CGGTGCCGC CGGTCAGCGACGTCT RPA3932 4441501 - 4439705 - | flagellar hook protein flgE TERM 3167 4444457 - 4444447 - gH 79 -8.2 -4.35885 | ACCGAGCAGAAGAAA GCCG AGG CGGC GCTACGCGACATCAA RPA3933 4441771 - 4444836 + | sensor histidine kinase RPA3934 4444803 - 4446011 + | sensor histidine kinase/response regulator RPA3935 4446201 - 4446473 + | hypothetical protein TERM 3168 4446483 - 4446453 - T 72 -3.9 -4.57073 | GACGCCGCCGAAAAA TGGCGGGCGCT GGCGAGCTG AGCCGCCGCCA CAGTACTCCGAGCTA RPA3936 4448003 - 4446510 - | hypothetical protein RPA3937 4448652 - 4448155 - | methionine sulfoxide reductase B RPA3938 4450246 - 4448786 - | FAD dependent oxidoreductase RPA3939 4450387 - 4450917 + | putative phosphohistidine phosphatase, SixA RPA3940 4450961 - 4451392 + | hypothetical protein RPA3941 4452010 - 4451414 - | hypothetical protein TERM 3169 4452081 - 4452125 + H 100 -13.4 -4.4009 | gap 1 AATGCGGCGTTCAGC CCGCGACCTGAGCCGGACGGG TTCA CCTTGCCGGC-CGGGGCGCGG TTTTCTACAATCCGA RPA3942 4452159 - 4452599 + | hypothetical protein TERM 3170 4452630 - 4452667 + T 79 -15.5 -2.94872 | opp_overlap 4452630 4452632, overlap 4452627 4452637 GCACGCTGTTGAAAA CACCAAAGGCCGCCCGG AAAT CCGCGCGGCCTTTGGCC TCATTGTTGCGTCAC TERM 3171 4452667 - 4452630 - T 100 -17.7 -4.08216 | opp_overlap 4452630 4452627 4452637, overlap 4452632 GCACGCTGTTGAAAA CACCAAAGGCCGCCCGG AAAT CCGCGCGGCCTTTGGCC TCATTGTTGCGTCAC TERM 3172 4452665 - 4452632 - T 100 -22.5 -3.63922 | opp_overlap 4452630 4452627 4452637, overlap 4452630 ACGCTGTTGAAAACA CCAAAGGCCGCCCGG AAAT CCGCGCGGCCTTTGG CCTCATTGTTGCGTC TERM 3173 4452637 - 4452660 + T 86 -15.2 -3.6501 | opp_overlap 4452632 4452630, overlap 4452630 4452627 GTTGAAAACACCAAA GGCCGCCCGG AAAT CCGCGCGGCC TTTGGCCTCATTGTT RPA3943 4453206 - 4452700 - | hypothetical protein RPA3944 4453613 - 4454704 + | hypothetical protein TERM 3174 4454960 - 4454912 - g 73 -14.4 -3.10715 | TCGAGCAGCACCGAA CCGGCCGCCCCCGCCGC-GCCGCC CCC GGCGGCAGCTCCGGCGGCG-CCTG CCGCACCGCCCTCCG RPA3945 4454765 - 4456852 + | hypothetical protein RPA3946 4458091 - 4456952 - | hypothetical protein TERM 3175 4457199 - 4457183 - G 71 -9.5 -3.81258 | GGAATAAGAGTTAAA TTCGAGA GCA TCTCGAA ACAGTTGGATTATGT TERM 3176 4458192 - 4458218 + r 73 -10.8 -3.57144 | opp_overlap 4458194, overlap 4458194 GGTTTCGGATAAAAA AAGCACCCCTCG GAT CGAGGGATGCTC TTTGAGGATGGCCGA TERM 3177 4458194 - 4458216 + r 77 -13.4 -3.36515 | opp_overlap 4458194, overlap 4458192 TTTCGGATAAAAAAA GCACCCCTCG GAT CGAGGGATGC TCTTTGAGGATGGCC TERM 3178 4458216 - 4458194 - R 100 -15.6 -5.60993 | opp_overlap 4458194 4458192 TTTCGGATAAAAAAA GCACCCCTCG GAT CGAGGGATGC TCTTTGAGGATGGCC RPA3947 4458933 - 4458271 - | hypothetical protein RPA3948 4460288 - 4459023 - | hypothetical protein wbpX 4461624 - 4460299 - | glycosyltransferase WbpX RPA3950 4461777 - 4462838 + | glycosyl transferase TERM 3179 4463269 - 4463233 - g 74 -12.4 -3.53012 | gap 2, opp_overlap 4463259, overlap 4463268 GCTCGGTGCCGTAAA CGCTCTCGAAGCAGTGCG GAT CGC-CTGC-CCGAAAGCG CGCTTCTATCAAGCG gmd 4462907 - 4463893 + | GDP-mannose 4,6-dehydratase RPA3952 4463893 - 4464876 + | oxidoreductase Rmd RPA3953 4466172 - 4464910 - | putative chloride channel protein TERM 3180 4466319 - 4466287 - R 95 -15.6 -4.07568 | opp_overlap 4466294, overlap 4466289 4466292 CCGCGCCCCCCAAAA CAGAAGAGCGCGCC GACTG GGCGCGCTCTTCAA GGACCAAATAGCCGG TERM 3181 4466317 - 4466289 - R 100 -20.4 -3.63744 | opp_overlap 4466294, overlap 4466287 4466292 GCGCCCCCCAAAACA GAAGAGCGCGCC GACTG GGCGCGCTCTTC AAGGACCAAATAGCC TERM 3182 4466314 - 4466292 - R 95 -16.3 -3.95435 | opp_overlap 4466294, overlap 4466289 4466287 CCCCCCAAAACAGAA GAGCGCGCC GACTG GGCGCGCTC TTCAAGGACCAAATA TERM 3183 4466294 - 4466312 + r 71 -13.1 -3.01712 | opp_overlap 4466292 4466289 4466287 CCCCAAAACAGAAGA GCGCGCC GACTG GGCGCGC TCTTCAAGGACCAAA RPA3954 4467368 - 4466340 - | thioredoxin reductase RPA3955 4467683 - 4467985 + | hypothetical protein TERM 3184 4468066 - 4468055 - T 93 -7.2 -5.09225 | opp_overlap 4468065, overlap 4468033 4468057 AGCGCACCCAAAAAA GCGG TCAA CCGC CGTGCTGAGCTCGGC TERM 3185 4468149 - 4468108 - T 73 -11.5 -3.56937 | overlap 4468104 4468110 4468111 4468117 TAAGACTCAAACTAA TACGAGAGACGTCGCGCAG CAGA CCGCGCGACGCGTCTCCGA TCGCAGATAACGGAA TERM 3186 4468147 - 4468110 - T 77 -14.1 -3.35011 | overlap 4468108 4468104 4468111 4468117 AGACTCAAACTAATA CGAGAGACGTCGCGCAG CAGA CCGCGCGACGCGTCTCC GATCGCAGATAACGG TERM 3187 4468146 - 4468111 - T 83 -17.6 -2.60283 | overlap 4468110 4468108 4468104 4468117 GACTCAAACTAATAC GAGAGACGTCGCGCAG CAGA CCGCGCGACGCGTCTC CGATCGCAGATAACG TERM 3188 4468140 - 4468117 - T 84 -16 -3.02038 | overlap 4468111 4468110 4468108 4468104 AACTAATACGAGAGA CGTCGCGCAG CAGA CCGCGCGACG CGTCTCCGATCGCAG RPA3956 4468485 - 4468165 - | ferredoxin TERM 3189 4468545 - 4468579 + r 73 -11.2 -3.53811 | overlap 4468546 ACGCGCCAGTCCTAT AGCGTCTCGGCCGGCG TTC CGCCAGCCGTTACGCC TTTCAAAAGCCTGGA TERM 3190 4468546 - 4468578 + r 75 -14.7 -2.72144 | overlap 4468545 CGCGCCAGTCCTATA GCGTCTCGGCCGGCG TTC CGCCAGCCGTTACGC CTTTCAAAAGCCTGG RPA3957 4468941 - 4468582 - | Hpt domain-containing protein TERM 3191 4469059 - 4469074 + H 78 -10.4 -4.07885 | TTAACGCATCCTTGC CGGTGC AGGC GCACCG TTTTGGCACAACATC TERM 3192 4470346 - 4470289 - g 75 -9.2 -4.11751 | gap 3, overlap 4470328 ACGAAGTCGCCAAAA GCATCACC-AGCGCGCTGGAAGAGCGCGG CGC CCACA-TCA-CCAGCGCGCTCGGCCACGC CGGCGACAACATGAT TERM 3193 4471742 - 4471697 - g 72 -8.9 -4.08216 | gap 1, overlap 4471721 CGACGGCCTGGAAAA CCGCGTCACTGCGGTCATCAAC GAC GTCGACCTCCGC-GTGTCGCAG TTCGAGGATCTGCTC TERM 3194 4473883 - 4473843 - g 70 -6 -4.25458 | AACGCGATCAACAAA TCGCTCAAGGACCTCGAC CTCGC GTCGCGGTCGGCGATCGA ACAGTCGCGGCAGGT RPA3958 4469382 - 4475459 + | hypothetical protein TERM 3195 4475522 - 4475502 - f 76 -14 -3.14963 | opp_overlap 4475502, overlap 4475494 GCCATAACGATCCAA GCGGAGGC CCAGC GCCTCCGC TTTTTCTTTGCCCGA TERM 3196 4475502 - 4475522 + F 100 -14 -5.27335 | opp_overlap 4475502 4475494 GCCATAACGATCCAA GCGGAGGC CCAGC GCCTCCGC TTTTTCTTTGCCCGA TERM 3197 4475596 - 4475630 + F 83 -7.3 -4.56597 | opp_overlap 4475580 4475581 CGCCCCGGAAAGGGG CCTGCCGTC-GCTACAT CTG AT-TACCAGACGGCAGG TTTTTCCCGGCACGC TERM 3198 4475823 - 4475798 - f 73 -12.5 -3.16683 | opp_overlap 4475821 AGCCGAGGTGACCAA GCGACCCGCAG CATT CCGCCGGTCGC TCGACATCGACGCGT RPA3959 4475883 - 4477367 + | putative amidase RPA3960 4477612 - 4478415 + | hypothetical protein RPA3961 4479493 - 4478600 - | hypothetical protein TERM 3199 4479605 - 4479585 - R 95 -10.3 -4.41047 | ATTGCGGAAGCAAAA CGACGCACC GGC GGCGCGACG ACCGAAATCTTCCCA RPA3962 4480404 - 4479631 - | ABC transporter ATP-binding protein RPA3963 4481558 - 4480407 - | hypothetical protein RPA3964 4481663 - 4482658 + | putative muconate cycloisomerase RPA3965 4483836 - 4482628 - | major facilitator transporter RPA3966 4483913 - 4485370 + | hypothetical protein RPA3967 4486395 - 4485400 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 3200 4486173 - 4486191 + g 72 -5.8 -4.30719 | overlap 4486175 CGGCACGCCGTAGCT CCGGCGAC AGC GACGCCAG TTTGTTGTAGGCGCC TERM 3201 4486283 - 4486257 - G 77 -7.9 -4.4078 | gap 1, overlap 4486258 4486259 CCGGTTTAAGGAAAA CGCGCG-CGCCG GTGG CGGCATCGAGCG CCGGCGACGACAGCA RPA3968 4487500 - 4486445 - | glycosyl transferase, group 1 RPA3969 4488297 - 4487500 - | metallophosphoesterase RPA3970 4489007 - 4488351 - | phosphatidylethanolamine N-methyltransferase thiD 4489900 - 4489100 - | phosphomethylpyrimidine kinase RPA3972 4491220 - 4490291 - | putative diheme cytochrome c-553 TERM 3202 4491188 - 4491164 - G 73 -12.1 -3.37796 | overlap 4491172 GGTGAGCAGCCAGAA CGCAGCAACCG CAA CGATCGCCGCG ACCAGAGTTACGGCT RPA3973 4491703 - 4491254 - | cytochrome c, class II RPA3974 4494136 - 4491815 - | carbon-monoxide dehydrogenase TERM 3203 4494332 - 4494305 - R 100 -16.4 -4.85782 | opp_overlap 4494305 CGGCGCAAAAAGAAA CAGGTGCATCGG TTGC CCGATACACCTG TTTGGAAGGTCGCGC TERM 3204 4494305 - 4494332 + r 85 -14.2 -3.55444 | opp_overlap 4494305 CGGCGCAAAAAGAAA CAGGTGCATCGG TTGC CCGATACACCTG TTTGGAAGGTCGCGC RPA3975 4494675 - 4494382 - | hypothetical protein TERM 3205 4494499 - 4494446 - G 80 -15.9 -3.29947 | overlap 4494442 4494449 4494469 TAGCCACGATAGTAA CCACGGCCACGGCCGCGGTAATAGC CAGG GCCCCAACCGCGGCCACGACCGTAA TAGCCGCGCCCACGG TERM 3206 4494496 - 4494449 - G 86 -17.6 -2.82519 | overlap 4494442 4494446 4494469 CCACGATAGTAACCA CGGCCACGGCCGCGGTAATAGC CAGG GCCCCAACCGCGGCCACGACCG TAATAGCCGCGCCCA TERM 3207 4494527 - 4494469 - G 70 -12.9 -3.01791 | opp_overlap 4494513, overlap 4494442 4494449 4494446 4494502 ACGGCCGCGGTAATA GCCAGGGCCCCAACCGCGGCCACGACC GTAAT AGCCGCGCCCACGGCCGCGACCACGGC CGCGCTGGGCCTCAG TERM 3208 4496054 - 4496026 - g 72 -4.3 -4.57073 | overlap 4496010 4496027 CACCGGCGCCAAAAA CCTGTGCATCGCC GGC GGCGTCGCGCTGA ACTGCGTCGCCAATG RPA3976 4495106 - 4496911 + | carbamoyltransferase RPA3977 4498441 - 4496912 - | integral membrane protein MviN TERM 3209 4497439 - 4497429 - G 72 -8.2 -4.07568 | opp_overlap 4497433 TCGGCGCGGGTAAAA GCGC CGC GCGC GAACATCGCCCGCAT wpbE 4499719 - 4498568 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3210 4498913 - 4498879 - G 71 -12.8 -3.33261 | opp_overlap 4498912, overlap 4498901 GCGGAACGGTGACAA CATCGGCGAGCGCCTT CGA ATAGCGCTCGGCGACG ACGTTGCGCGCCGCG RPA3979 4500772 - 4499777 - | putative NADH-dependent dehydrogenase wbnF 4501959 - 4500913 - | nucleotide sugar epimerase TERM 3211 4501409 - 4501425 + g 83 -3.6 -5.14563 | TGGCTGTAGCAATGC GCCATC AACTC GTTGGC TTTTTTGGTCGCCGC TERM 3212 4502437 - 4502485 + G 77 -10.9 -3.87815 | overlap 4502428 4502463 CGCCGCCACCTATTC GGTGTTCGTCGATCGGGCGACCG GAT TGATCGCCTTGTCGGCGATCATC TTTGTGACACTGCCG TERM 3213 4502463 - 4502483 + G 70 -11.2 -3.52906 | overlap 4502437 ATCGGGCGACCGGAT TGATCGCC TTGTC GGCGATCA TCTTTGTGACACTGC TERM 3214 4503022 - 4503008 - g 71 -3.4 -4.58663 | overlap 4503009 4503010 ATGAGCGCCGAAAAA GCCGCC AAG GGCGAT GCGCCGATCGAAGTT RPA3981 4502087 - 4503046 + | hypothetical protein RPA3982 4503101 - 4504111 + | glycosyl transferase family protein RPA3983 4506153 - 4504132 - | polysaccharide biosynthesis protein CapD rfaE 4507564 - 4506092 - | putative ADP-heptose synthase TERM 3215 4507329 - 4507316 - GR 73 -3.7 -4.62069 | overlap 4507317 4507318 TTCGGATTCCAAAAA TCGCC CGGT GGCGT CATCACCGATCAGGC RPA3985 4508569 - 4507589 - | ADP-L-glycero-D-manno-heptose-6-epimerase RPA3986 4508639 - 4509829 + | lipopolysaccharide heptosyltransferase II lpcA 4509900 - 4510487 + | phosphoheptose isomerase TERM 3216 4510920 - 4510944 + G 70 -6.3 -4.27316 | CAAGCGACGTTGAAG CCGCGAAGGCT GCC GGCATTCCCGG TTTTCGCTTCGAAGG RPA3988 4510484 - 4511026 + | putative phosphatase RPA3989 4511967 - 4511023 - | lipopolysaccharide heptosyltransferase I TERM 3217 4511996 - 4511978 - H 76 -8.1 -4.20531 | gap 1, opp_overlap 4511978 GACATTGACGCAAAA GGCC-CGC AATT GCGCGGCC CTCGTTACAGGATTG galE1 4512150 - 4513163 + | UDP-glucose 4-epimerase RPA3991 4513285 - 4515087 + | putative ABC transporter ATP-binding protein RPA3992 4515148 - 4515849 + | fumarylacetoacetate (FAA) hydrolase RPA3993 4516916 - 4516059 - | hypothetical protein TERM 3218 4517018 - 4516997 - R 83 -9.3 -4.35461 | TGAATAGCAGGAAAA GCCGCGCAC ATGG GGGCGCGAC GAGGCTTGGAGCCTC RPA3994 4518180 - 4517032 - | putative diguanylate cyclase (GGDEF) RPA3995 4518385 - 4518843 + | hypothetical protein RPA3996 4519596 - 4518883 - | Crp/FNR family transcriptional regulator RPA3997 4520276 - 4519740 - | hypothetical protein RPA3998 4520512 - 4520279 - | hypothetical protein RPA3999 4521560 - 4520517 - | coenzyme PQQ synthesis protein E RPA4000 4521683 - 4525000 + | adenylate/guanylate cyclase RPA4001 4525204 - 4527288 + | putative DEAD-box protein, ATP-independent RNA helicase TERM 3219 4527435 - 4527404 - T 95 -10.9 -4.62069 | gap 1, opp_overlap 4527403 4527402, overlap 4527405 GCGTCACTGCAAAAA TGTCGATGCCCGGC ACAAG GCCGGGCAT-GACG CGTTGTTGATGGTGG TERM 3220 4527434 - 4527405 - T 82 -14.4 -3.3692 | gap 1, opp_overlap 4527403 4527402, overlap 4527404 CGTCACTGCAAAAAT GTCGATGCCCGGC ACAAG GCCGGGCAT-GAC GCGTTGTTGATGGTG RPA4002 4528882 - 4527500 - | putative acyl-CoA dehydrogenase RPA4003 4529421 - 4529558 + | hypothetical protein TERM 3221 4529644 - 4529697 + F 86 -18.4 -2.79574 | gap 3, opp_overlap 4529647, overlap 4529642 ATCAAGCCTTTGAGG ACATTCAGTCGCCAGCCGTGACGGGCG CCT CGCCCG-CACGG-TGGCGA-TGGATGA TGATTGGTGGCTCTG TERM 3222 4529694 - 4529647 - f 81 -16.5 -2.78715 | gap 3, opp_overlap 4529644 4529642 AAGCCTTTGAGGACA TTCAGTCGCCAGCCGTGACGGGCG CCT CGCCCG-CACGG-TGGCGA-TGGA TGATGATTGGTGGCT RPA4004 4530050 - 4530211 + | hypothetical protein TERM 3223 4530306 - 4530287 - f 71 -5.6 -4.26903 | gap 1, overlap 4530272 GGCACGCGATGAAAA CCAC-GCGC GCT GCGCTGAGG AAAACCCGGCGATGG TERM 3224 4530355 - 4530311 - f 76 -7.9 -4.25104 | gap 3, opp_overlap 4530337 4530339 4530340, overlap 4530312 CTGCGCTGAGGAAAA CCCGGCGATGGCCAC--CGACC TGCT GGTCGCCGCGGCCACCGC-GGT CTATTTCGTCGCACT TERM 3225 4530340 - 4530354 + F 74 -12.8 -3.29704 | opp_overlap 4530312 4530311, overlap 4530339 4530337 CCGACCTGCTGGTCG CCGCGG CCA CCGCGG TCTATTTCGTCGCAC RPA4006 4530839 - 4531315 + | hypothetical protein RPA4007 4531480 - 4531812 + | hypothetical protein RPA4008 4532011 - 4532274 + | hypothetical protein RPA4009 4532346 - 4534394 + | signal transduction histidine kinase RPA4010 4534391 - 4534768 + | response regulator receiver (CheY-like protein) TERM 3226 4535897 - 4535915 + G 70 -10.2 -3.64822 | CCAAGGCGTGGTGCC TCGCCGCC CCG GGCGGAGA TTTCAATCCCGGCAT RPA4011 4535113 - 4537245 + | serine protease/outer membrane autotransporter RPA4012 4537981 - 4538667 + | hypothetical protein RPA4013 4540454 - 4538856 - | putative ATP-binding component of ABC transporter TERM 3227 4539159 - 4539141 - G 79 -8.8 -4.36903 | overlap 4539143 CCCACGAAACAGAAA CCGCGC CAACGCC GCGCGG CAGGCGTTGAGGTCC TERM 3228 4540687 - 4540709 + H 71 -4.6 -4.41348 | overlap 4540688 GTTAGCCGAAGGCGT ACCCCGCCGC ACA GCGGGAGGGC TTTGTTTCGGCGAAA RPA4014 4540989 - 4543007 + | hypothetical protein TERM 3229 4543012 - 4543044 + T 71 -6.1 -4.2828 | opp_overlap 4543017, overlap 4543013 4543015 4543017 TAGCTGACTGAACGC AAAAAGCCCCAGAGC ATC GCTCCGGGGCTGTAC TTTTCGTGGATGGCC TERM 3230 4543015 - 4543041 + T 70 -12.2 -3.14218 | opp_overlap 4543017, overlap 4543013 4543012 4543017 CTGACTGAACGCAAA AAGCCCCAGAGC ATC GCTCCGGGGCTG TACTTTTCGTGGATG TERM 3231 4543039 - 4543017 - T 100 -17 -4.75174 | opp_overlap 4543015 4543013 4543012 4543017 GACTGAACGCAAAAA GCCCCAGAGC ATC GCTCCGGGGC TGTACTTTTCGTGGA TERM 3232 4543017 - 4543039 + T 80 -14.8 -3.12521 | opp_overlap 4543017, overlap 4543015 4543013 4543012 GACTGAACGCAAAAA GCCCCAGAGC ATC GCTCCGGGGC TGTACTTTTCGTGGA TERM 3233 4543047 - 4543082 + T 71 -9 -3.71873 | gap 1, overlap 4543048 TCCGGGGCTGTACTT TTCGTGGATGGCCGGGT CAA GCCCGGCCATG-ACGAC TTTAACTATCAATAC TERM 3234 4543048 - 4543081 + T 70 -12.5 -2.82803 | gap 1, overlap 4543047 CCGGGGCTGTACTTT TCGTGGATGGCCGGGT CAA GCCCGGCCATG-ACGA CTTTAACTATCAATA ahcY 4544500 - 4543091 - | S-adenosyl-L-homocysteine hydrolase metK 4545957 - 4544761 - | S-adenosylmethionine synthetase TERM 3235 4545970 - 4545990 + r 79 -8.1 -4.2558 | overlap 4545972 CATCACCAACCCCTT GTCCGCCGG ACC CCGGCGGTG TTTTCGTGAAAGATA TERM 3236 4545972 - 4545988 + r 90 -15.1 -3.73042 | overlap 4545970 TCACCAACCCCTTGT CCGCCGG ACC CCGGCGG TGTTTTCGTGAAAGA RPA4017 4547427 - 4546021 - | hypothetical protein RPA4018 4547580 - 4548890 + | UDP-glucose 6-dehydrogenase TERM 3237 4549193 - 4549209 + G 78 -13.7 -3.59262 | overlap 4549200 GTCCTGCGCAGCGTC GCCGTCG GCG CGACGGC TTTGGCGCTGTCGAG TERM 3238 4549200 - 4549225 + G 76 -8.2 -4.21194 | overlap 4549193 GCAGCGTCGCCGTCG GCGCGACGGC TTTGGC GCTGTCGAGC TTTTCGCTGATGCAC TERM 3239 4549374 - 4549353 - g 71 -12.3 -3.22475 | overlap 4549357 TGTATGTCGACAAGA TCAACGCCG CGGG CGGCGTCGA CGGCAAGAAGATCGA RPA4019 4549160 - 4550341 + | putative branched-chain amino acid ABC transporter system substrate-binding protein TERM 3240 4550423 - 4550473 + F 93 -8.3 -5.06414 | gap 2 CATACTCCCTGCGGT GGTTATGGATTCCGGGCTCGCGAGC TGC GCTCGCGC-CCCGGAATG-ACGGCC TTTTTGTTGAGAGCG RPA4020 4550491 - 4551363 + | branched chain amino acid ABC transporter permease RPA4021 4551364 - 4552311 + | putative branched-chain amino acid ABC transport system permease protein livm (liv-I protein m) RPA4022 4552308 - 4553090 + | putative branched-chain amino acid ABC transport system, ATP-binding protein RPA4023 4553083 - 4553787 + | putative branched-chain amino acid ABC transport system ATP-binding protein TERM 3241 4553988 - 4553967 - T 100 -17.3 -3.84451 | GCGTTGAAACGCAAA TGGCCGGGG TGAG CCCCGGCCA TCACGCAGATACAAC TERM 3242 4554020 - 4554008 - T 80 -4.8 -4.87592 | overlap 4554010 GCAGATACAACAAAA GCTC AAGCG GAGC GCTTACTTCCCCCAA RPA4024 4555144 - 4554023 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 3243 4554297 - 4554272 - G 72 -13.3 -3.14132 | gap 1 GCCCTTGGGCAGGAA GCG-CAGCGGCT CGA AGCCGCCGGCGC GCTCGGAATCGTATT TERM 3244 4555097 - 4555127 + g 71 -3.1 -4.58585 | gap 1 CTGCGGTCGCAGCAG GCTGCCG-ACCTCG TCGG CGCGGAACGGTGGC TTTGTTCTTTGCGTC RPA4025 4555876 - 4555160 - | putative branched-chain amino acid ABC transport system ATP-binding protein RPA4026 4556514 - 4555897 - | ABC transporter ATP-binding protein RPA4027 4557671 - 4556646 - | branched chain amino acid ABC transporter permease RPA4028 4558537 - 4557671 - | ABC transporter permease RPA4029 4559866 - 4558688 - | branched chain amino-acid ABC transporter substrate-binding protein TERM 3245 4558881 - 4558899 + g 70 -11.6 -3.38991 | overlap 4558880 GCGATCAGCGAATCG CCGTCGGC CTT GCCGCCGG TCTTCTTCAGCGCCT RPA4030 4560104 - 4560502 + | hypothetical protein RPA4031 4560558 - 4561145 + | hypothetical protein purU 4562015 - 4561152 - | formyltetrahydrofolate deformylase hemD 4562147 - 4562992 + | uroporphyrinogen III synthase HEM4 TERM 3246 4563673 - 4563658 - g 70 -4 -4.45544 | gap 1 GCTGACCAACGAAAA GTG-CAG CTT CTGGCAC TTCCGCTGGGACGCC TERM 3247 4564411 - 4564387 - g 75 -2.8 -4.71426 | overlap 4564389 GTTCGATGAAGAAAA GACCGGCT GGGGCTGGA AGCAGGTC GCCAAGATCGACACC RPA4034 4563239 - 4564471 + | ABC transporter, periplasmic branched chain amino acid binding protein RPA4035 4564600 - 4565547 + | inner-membrane translocator RPA4036 4565544 - 4566845 + | inner-membrane translocator RPA4037 4566842 - 4567591 + | ABC transporter ATP-binding protein RPA4038 4567591 - 4568289 + | possible ABC transport system ATP-binding protein RPA4039 4568455 - 4569033 + | hypothetical protein RPA4040 4569156 - 4571108 + | hypothetical protein TERM 3248 4571458 - 4571485 + G 72 -7 -4.23892 | gap 1, opp_overlap 4571460, overlap 4571419 4571460 4571462 CGCGCTGAGCGAAGT GAGCTTTGCCGTG AAT CACGGCG-AGCTG TTTTCGATCATTGGA TERM 3249 4571771 - 4571719 - g 73 -4 -4.57569 | gap 1, opp_overlap 4571728, overlap 4571722 4571723 4571724 4571767 CCACCTGCTCAAAAA CAACTTCTTCACCG-GGGCGCTGTA TTGG TTCGGCGCCCGCCGCGAAGAGCTCG CCCACCGCGAGAAGG TERM 3250 4571767 - 4571722 - g 72 -5.4 -4.40561 | opp_overlap 4571728, overlap 4571719 4571723 4571724 CCTGCTCAAAAACAA CTTCTTCACCG-GGGCGCTGTA TTGG TTCGGCGCCCGCCGCGAAG-AG CTCGCCCACCGCGAG RPA4041 4571291 - 4572217 + | branched chain amino acid ABC tranpsorter ATP-binding protein RPA4042 4572214 - 4574145 + | AMP-dependent synthetase and ligase RPA4043 4574213 - 4575151 + | inner-membrane translocator RPA4044 4575257 - 4576330 + | inner-membrane translocator TERM 3251 4576580 - 4576567 - g 73 -9.5 -3.9461 | CTGGGTCAACAAGAA CGGCG GCGT CGCCG GCAAGCAGCTCAACG TERM 3252 4577226 - 4577205 - g 74 -15.1 -3.03338 | opp_overlap 4577199 4577218, overlap 4577194 AGAACGCCGCCAAGA CCGCCGGCG ATGC CGCCGACGG CGTGATCTTCCCGCT RPA4045 4576388 - 4577668 + | branched chain amino-acid ABC transporter substrate-binding protein TERM 3253 4577802 - 4577772 - f 72 -7.5 -4.21773 | gap 1, opp_overlap 4577781 CCTCAACACAAACAA CCGTCATCCCCCGC GCAT GCGGGGGACC-CAG TACGCCGCAGCGTCG RPA4046 4577938 - 4578780 + | branched chain amino acid ABC tranpsorter ATP-binding protein RPA4047 4579608 - 4578940 - | haloacid dehalogenase-like hydrolase TERM 3254 4580245 - 4580235 - H 73 -8.2 -4.05788 | CCCCTTGAAATGAAA CGGC TTG GCCG CTAAAGGCTTTGCGG rfbF 4580288 - 4581055 + | alpha-D-glucose-1-phosphate cytidylyltransferase rfbG 4581052 - 4582146 + | CDP-glucose 4,6-dehydratase TERM 3255 4582219 - 4582198 - g 74 -8 -4.19371 | opp_overlap 4582198, overlap 4582188 4582187 GAAATCCTCAAGAAA CTACGCCA GGAATA TGGCGCAG TTTCTGTGAAGGCCG RPA4050 4582156 - 4582953 + | hypothetical protein RPA4051 4582978 - 4583694 + | oxo-acyl acyl carrier protein dehydrogenase TERM 3256 4584739 - 4584699 - g 75 -4.9 -4.59773 | gap 4, opp_overlap 4584732 TGTCAGTGTCAAAAA CGCCCGAGACACG-GCGCAAG ATC CTCG-GCGCGT-TCTC-GGCG GCTTTCGACGAGATA RPA4052 4583678 - 4584796 + | 3-dehydroquinate synthase RPA4053 4584793 - 4585872 + | dtdpglucose 4,6-dehydratase TERM 3257 4585903 - 4585922 + G 72 -5.6 -4.30576 | gap 1 CGCCCAAAAGGTCGT CGAGCTCGG TGT CCG-GCACG TTTTCATGGTGACGG TERM 3258 4586950 - 4586923 - g 74 -9.9 -3.89291 | CGAACAGCACAAGAA GTGGTTGGCCT GGGCCA AGGCCAAACAC GAACAGTTCCCGGCG RPA4054 4585865 - 4587670 + | acetolactate synthase large subunit RPA4055 4587670 - 4588125 + | hypothetical protein RPA4056 4588115 - 4589041 + | hypothetical protein TERM 3259 4589740 - 4589751 + G 70 -3.6 -4.44667 | CCCATCCGCATTGCC GCCT TTCT GGGC TTTCTTCTTGGCACC RPA4057 4589041 - 4589979 + | dolichol phosphate mannose synthase RPA4058 4591113 - 4590076 - | glycosyl transferase family protein TERM 3260 4590673 - 4590661 - G 79 -4.8 -4.72986 | GACGGCGACGAAAAA GTCC GATGG GGAC TTGAACTCGATCGCT RPA4059 4592116 - 4591214 - | hypothetical protein RPA4060 4593444 - 4592113 - | hypothetical protein TERM 3261 4593051 - 4593037 - G 79 -3.5 -4.92385 | overlap 4593039 CACAGCCAAAGAAAA CGGAC GCCAG ATCCG CGTCGACAGCACCAG RPA4061 4594539 - 4593550 - | putative glycosyltransferase TERM 3262 4595348 - 4595365 + G 73 -12.7 -3.40403 | TAGGGGCGGTCGTCA TGCCGGC CTCG GCCGGCA TTGTCATCCAAGGCA RPA4062 4594774 - 4596105 + | hypothetical protein TERM 3263 4596750 - 4596774 + F 93 -18.7 -3.2375 | overlap 4596746 CTAGCTGCGCATTCT TTGTCCGGACC TCT GGTCCGGACAA TTGGCTTCTGGAGTG RPA4063 4597116 - 4599650 + | hypothetical protein RPA4064 4602869 - 4599852 - | hypothetical protein TERM 3264 4602102 - 4602114 + g 85 -6.2 -4.89063 | GATCTTCCGATCTTC GGCG ACTTC CGCC TTTATTTTTAGGTCG TERM 3265 4602646 - 4602625 - G 70 -2.1 -4.63218 | overlap 4602608 CCCCCCCCAACAAAA GGGTGAGGC AAAG GCGCGACCC AATGGAGCGACCCTG TERM 3266 4604719 - 4604729 + G 72 -6.8 -4.20354 | TCGGCTTTTTGGCTG GTCG TTT CGAC TTTTGGGATTGGGTT RPA4065 4602985 - 4605462 + | hypothetical protein RPA4066 4605912 - 4605989 + | hypothetical protein RPA4067 4606147 - 4606470 + | hypothetical protein RPA4068 4606749 - 4606504 - | hypothetical protein TERM 3267 4606949 - 4606931 - R 100 -11.6 -5.07011 | GACACAAAGGAAAAA GCGGGCGC CGA GGGCCCGC TTCCGCAAATCAATC RPA4069 4607399 - 4606983 - | methionine sulfoxide reductase B msrA1 4608140 - 4607430 - | methionine sulfoxide reductase A TERM 3268 4608475 - 4608490 + H 75 -3.9 -4.81083 | GGAAGATTAACGCGG GGGCG GTGCAA CGCTC TTTTTCCTGGTTCAA TERM 3269 4608637 - 4608656 + H 100 -10.6 -5.60993 | GCTTGAAGACCTGAG GGACGCGC GGCT GCGCGCCC TTTTTTTGTGCCCGC carB 4608699 - 4612028 + | carbamoyl phosphate synthase large subunit greA 4612252 - 4612728 + | transcription elongation factor GreA TERM 3270 4612755 - 4612772 + F 100 -9.8 -5.4505 | opp_overlap 4612755 CGACGGGACGAAAAA GCCGCG CTTCGC CGCGGC TTTTTTGTTGCCCGA TERM 3271 4612772 - 4612755 - f 100 -9.8 -4.7373 | opp_overlap 4612755 CGACGGGACGAAAAA GCCGCG CTTCGC CGCGGC TTTTTTGTTGCCCGA RPA4073 4612907 - 4613317 + | DoxD-like family protein TERM 3272 4613342 - 4613368 + T 81 -13.6 -3.59979 | opp_overlap 4613341 4613338 AGCACTGAAAAGATT GCAGCGGCGGCC TCA GGTCGTCGCGGC TTTCAACTCCAGCGG RPA4074 4613836 - 4613354 - | leucine responsive transcriptional regulator LRP/BkdR trxB 4614093 - 4615058 + | thioredoxin reductase RPA4076 4615067 - 4615990 + | LysR family transcriptional regulator TERM 3273 4616181 - 4616201 + T 100 -11.8 -5.60993 | GCCAAAGACCTTAAG CCGGGCTC TTCGT GGGCCCGG TTTTTTTCTGCGCAA TERM 3274 4616284 - 4616267 - T 100 -14.1 -5.15634 | opp_overlap 4616278 CAGCTCATGAAAAAA CGCGCGG GTGG CCGCGCG CTGCAGTGGTGTTGG RPA4077 4616981 - 4616307 - | cobyrinic acid a,c-diamide synthase RPA4078 4617570 - 4617193 - | hypothetical protein RPA4079 4617999 - 4617664 - | hypothetical protein RPA4080 4618422 - 4618141 - | hypothetical protein RPA4081 4619405 - 4618593 - | Flp pilus assembly CpaB TERM 3275 4619539 - 4619587 + H 76 -5.8 -4.59109 | gap 2, opp_overlap 4619518 4619528, overlap 4619560 CAGAGCCGCGGGCCT GCG-CACGCGGTCTGG-GCGCAGG CGC CATGCGCTTCGGTCCGCTCGACGC TTTTTCAGGCGTCTC RPA4082 4619836 - 4621062 + | phage-like integrase TERM 3276 4621209 - 4621230 + F 72 -2.3 -4.77165 | gap 1, overlap 4621204 4621203 TTCAGTCAGAGCGCA TTGCCCA-CT AGC AGATGCGCAA TTTTGTTATCGACGG RPA4083 4621775 - 4622530 + | hypothetical protein TERM 3277 4622561 - 4622608 + GF 100 -27.2 -3.14211 | gap 2, opp_overlap 4622586 4622587 GCTGGTTCGTCTCGC CCGTCTTGCCGACGGCGGCGCC AAATTC GGCGCCGCCGTCGGC--GACGG TTGGTGGGCGGGGCT RPA4084 4622490 - 4624481 + | AAA ATPase TERM 3278 4624493 - 4624509 + F 79 -11.5 -3.83026 | TTGACGAGGGCGGAG CCGCCGC AAA GTGGCGG TTTCCTATCCAACCG RPA4085 4624551 - 4625177 + | TetR family transcriptional regulator RPA4086 4626570 - 4625458 - | ABC transporter permease RPA4087 4629368 - 4626573 - | ABC-2 type transport system permease and double ATP-binding protein fusion TERM 3279 4627647 - 4627598 - G 75 -15.7 -2.79209 | gap 1, opp_overlap 4627636, overlap 4627586 4627595 4627593 CAAGCACGAACATCA GCACCACGCTGCCGATCAGTGCCA GCG TGGCGCGGATCGG-ATCGCGGCGC AATTCCAGCGCCTCG RPA4088 4630441 - 4629365 - | HlyD family secretion protein RPA4089 4631675 - 4630485 - | patatin-like phospholipase domain-containing protein RPA4090 4632479 - 4631838 - | hypothetical protein RPA4091 4632585 - 4633280 + | TetR family transcriptional regulator TERM 3280 4633342 - 4633317 - T 79 -15.5 -2.83641 | opp_overlap 4633308 4633317, overlap 4633324 CAATCCAGCAGCACA GGTCAAAGCCC CGCC GGGCCTTGACC TTCGATGAGTTTGCG TERM 3281 4633317 - 4633342 + T 73 -13.3 -3.11732 | opp_overlap 4633317 4633324, overlap 4633308 CAATCCAGCAGCACA GGTCAAAGCCC CGCC GGGCCTTGACC TTCGATGAGTTTGCG RPA4092 4634001 - 4633402 - | hypothetical protein RPA4093 4634442 - 4634191 - | hypothetical protein RPA4094 4635371 - 4634535 - | hypothetical protein RPA4095 4638561 - 4635409 - | putative multidrug-efflux transport protein mexF TERM 3282 4635853 - 4635841 - G 84 -6.9 -4.76312 | CAGAAGACCGAAAAA CGCGC CAA GCACG CCGACCGTGACCGAC TERM 3283 4636965 - 4636950 - G 76 -8.2 -4.25283 | opp_overlap 4636958 4636959, overlap 4636953 AGCCGCCGACCAAAA GCAGCG AGAT CGCCGC CATCCGCAGCGACTT TERM 3284 4637599 - 4637621 + g 73 -6.3 -4.37886 | gap 2 CGACCGAACCTTCAA TCC-C-GCCGG AAC CCGGCCGCGGA TTTTGTCGAGCGTGG RPA4096 4639741 - 4638566 - | multidrug efflux membrane fusion protein mexE RPA4097 4639835 - 4640461 + | TetR family transcriptional regulator TERM 3285 4640581 - 4640607 + F 73 -11.4 -3.54935 | overlap 4640582 GCCTGCATGCGGCAC CGCTCGCCGCTG CGT CGGCGGCGCGCA TTTGAAAGGGATTTC TERM 3286 4640582 - 4640606 + F 75 -14.9 -2.7264 | overlap 4640581 CCTGCATGCGGCACC GCTCGCCGCTG CGT CGGCGGCGCGC ATTTGAAAGGGATTT TERM 3287 4640936 - 4640923 - g 70 -3.7 -4.56597 | overlap 4640926 GCGTGGTGGGAAAAA GAGGG CAAG CCCGC GTTCGAAGCCTACGC RPA4098 4640831 - 4641529 + | putative RNA polymerase ECF-type sigma factor RPA4099 4641574 - 4641816 + | hypothetical protein RPA4100 4641838 - 4642200 + | hypothetical protein RPA4101 4642335 - 4642760 + | putative organic hydroperoxide resistance protein TERM 3288 4643064 - 4643042 - g 70 -10.5 -3.66874 | TGAAGCGGATGGAAA CCGCCGGAC TGCTG ACCCGGCGG CGCGATGCGGAAGAT RPA4102 4642801 - 4643262 + | MarR family transcriptional regulator RPA4103 4643266 - 4643931 + | glutathione S-transferase TERM 3289 4643996 - 4643975 - T 91 -9.4 -4.4648 | opp_overlap 4643975 4643994 ACGCGCACGAGAAAA CGCTCGGC TAAACG ACCGAGCG TTCAATGCTATATTG RPA4104 4644707 - 4644066 - | hypothetical protein TERM 3290 4644979 - 4645005 + H 74 -2.3 -4.84017 | opp_overlap 4644993 CGCTTGAAATCGATG CGGTATTATGT AAACG ATACAGTACCG TTTTTATGAAAGGTT TERM 3291 4645370 - 4645342 - g 81 -11 -4.07687 | opp_overlap 4645353 ACCGGTGGTCCAAAA CCAGACGATCGC GGCTG GCGATCAACTGG CGAAGATCGACGACC rmrA 4645025 - 4646239 + | hlyD family multidrug secretion protein TERM 3292 4647361 - 4647378 + G 73 -9.1 -3.94634 | overlap 4647350 4647349 4647351 CTGTTTGCGCAGATC CTGCGCG GCTT TGCGCAG TTCTTTACGCTGGTC rmrB 4646236 - 4647786 + | multidrug efflux pump TERM 3293 4647895 - 4647919 + F 81 -13.6 -3.59262 | gap 1, overlap 4647897 GCCGCCGCTTGCTGC GCCTCTGGCCG AGAC CGGCCAG-GGC TTTCGACGTCTCGGC TERM 3294 4647897 - 4647918 + F 72 -13.7 -2.75343 | overlap 4647895 CGCCGCTTGCTGCGC CTCTGGCCG AGAC CGGCCAGGG CTTTCGACGTCTCGG TERM 3295 4648992 - 4648977 - g 75 -6.8 -4.30576 | CGCGCAGTATCAAAA CACGGT CCTC ACCGCG CTGCAGGACGCTGAA TERM 3296 4649103 - 4649053 - g 81 -8.2 -4.48823 | gap 2, overlap 4649055 4649083 AACCAAGTGACAAAA CTGGCGCGCGCCAGCGCGTCGGCC GACAA AGCCGCCGAGCTGATGCG-GC-AG CGGAACCGCGCCGGT oprN 4647970 - 4649298 + | putative outer membrane efflux protein OprN precursor RPA4108 4649318 - 4649986 + | TetR family transcriptional regulator RPA4109 4650058 - 4650372 + | hypothetical protein TERM 3297 4650375 - 4650391 + F 84 -10.8 -4.13767 | opp_overlap 4650374 4650373 4650370 GAAGTCAAAATAATC GCGGCG ACCTC CGCCGC TTTTCGAATCGCGGG TERM 3298 4652029 - 4652017 - g 77 -7.7 -4.3898 | opp_overlap 4652017, overlap 4652025 AGTACGTCGAGAAAA TTGCG AAA CGCAA TCCGTTTACGGGCAA mycA 4650930 - 4652696 + | myosin-crossreactive antigen TERM 3299 4652954 - 4652916 - f 70 -11.6 -3.24924 | opp_overlap 4652911 4652947, overlap 4652914 4652917 CGCCGAGCGAGAAGA GGCCGCCGCGGCGAAAAG GTT CCTTTCCCAACGGCGGCA GTCGTCTATGTCGTC TERM 3300 4652953 - 4652917 - f 77 -15.1 -2.5474 | opp_overlap 4652911 4652947, overlap 4652916 4652914 GCCGAGCGAGAAGAG GCCGCCGCGGCGAAAAG GTT CCTTTCCCAACGGCGGC AGTCGTCTATGTCGT RPA4111 4652962 - 4653267 + | hypothetical protein RPA4112 4654732 - 4655625 + | putative diguanylate cyclase (GGDEF) RPA4113 4656317 - 4657198 + | putative conjugal transfer protein trbB RPA4114 4657318 - 4658322 + | LysR family transcriptional regulator trbI2 4659776 - 4658541 - | putative conjugal transfer protein trbI trbG2 4660816 - 4659776 - | conjugal transfer protein trbG trbF2 4661496 - 4660813 - | conjugal transfer protein trbF RPA4118 4662795 - 4661500 - | conjugal transfer protein trbL TERM 3301 4662738 - 4662706 - G 79 -11.9 -3.85698 | opp_overlap 4662701, overlap 4662691 4662707 CGTGGTGGCGACAAA GGCCACCTCGGGCTG CAG CAGCCCGAAGCCGCT ATCGATATATTGGGT TERM 3302 4662737 - 4662707 - G 76 -15.4 -2.91276 | opp_overlap 4662701, overlap 4662691 4662706 GTGGTGGCGACAAAG GCCACCTCGGGCTG CAG CAGCCCGAAGCCGC TATCGATATATTGGG RPA4119 4663185 - 4662799 - | TrbK RPA4120 4663919 - 4663182 - | conjugal transfer protein trbJ trbE2 4666357 - 4663916 - | conjugal transfer protein trbE TERM 3303 4665099 - 4665062 - G 71 -9.2 -3.81741 | gap 1, opp_overlap 4665063, overlap 4665056 4665053 4665096 AAGTGAGAACCGAAA CGGCGTTGCGCCTTCGG TCCTG CCGAAGA-ACAATGCCG GGGCGCCCAAATGCT RPA4122 4666630 - 4666367 - | conjugal transfer protein TrbD trbC2 4666974 - 4666630 - | conjugal transfer protein trbC trbB2 4667939 - 4666971 - | conjugal transfer protein trbB RPA4125 4668737 - 4668297 - | hypothetical protein RPA4126 4669896 - 4668694 - | hypothetical protein RPA4127 4670587 - 4669871 - | hypothetical protein RPA4128 4670845 - 4670603 - | hypothetical protein RPA4129 4670965 - 4671315 + | XRE family transcriptional regulator TERM 3304 4671615 - 4671641 + G 75 -2.8 -4.83169 | opp_overlap 4671616, overlap 4671616 GAAGCGCTCCTGACA ACCGGCGTTC ATGAATC GCGCGCCGGG TTTTTGTCCGGCGAT TERM 3305 4671735 - 4671722 - g 75 -4.5 -4.66163 | ATTGCCATTCAAAAA GGCCA TCGC TGACC ACCCTGCGGGTATGG TERM 3306 4671860 - 4671874 + G 70 -3.5 -4.52589 | overlap 4671827 4671826 4671822 CTCGAGTCAGGGCGA CGCCA TCGAT TGGTG TTTTATGTCAGACGG TERM 3307 4671940 - 4671927 - g 74 -8.1 -4.1822 | overlap 4671931 CGTTACTTGAAGAAA GGGAC CGCT GTCCC GAACGGTACCTTGAC RPA4130 4671312 - 4672205 + | hypothetical protein RPA4131 4672884 - 4672420 - | CopG family protein traG1 4674888 - 4672894 - | plasmid transfer factor, traG TERM 3308 4673724 - 4673761 + g 78 -15.7 -3.19157 | gap 1, overlap 4673715 ATTCCTCCGTGAGCC GCCGCCCGATCTGGTTGA GGA TCAACCGGATCAG-CGGC TTGGTGCGGTTGATG RPA4133 4675321 - 4675022 - | hypothetical protein TERM 3309 4675378 - 4675366 - H 72 -7.7 -4.17023 | overlap 4675358 4675356 4675355 GCAAGTATCCCAAAA TGGGA TAA TCCCA ACTCAGGATTACCGG RPA4134 4675429 - 4675707 + | XRE family transcriptional regulator RPA4135 4676341 - 4675844 - | GCN5-related N-acetyltransferase RPA4136 4676616 - 4678526 + | DNA topoisomerase TERM 3310 4679103 - 4679083 - T 91 -15.4 -3.96148 | CCTTCCGACGACAAA GCCCGGGC GGATG GCCCGGGC CCTGAAAACGTTGAA RPA4137 4679562 - 4679131 - | hypothetical protein TERM 3311 4679762 - 4679774 + r 70 -10.5 -3.53811 | overlap 4679767 GGTGGTGGGGCTCGT GGCCC GCC GGGCC TTTGAGGAGGCTCAG RPA4138 4680169 - 4679786 - | phasin 2 RPA4139 4681149 - 4680511 - | hypothetical protein TERM 3312 4681839 - 4681857 + H 71 -13.8 -2.5547 | opp_overlap 4681818 4681832 4681833, overlap 4681838 CCGAACAACCTGCAC CGCGGCGG CAT CCGCTGCG CTTCGTCTGGCAGAT RPA4140 4683029 - 4684075 + | sensor histidine kinase RPA4141 4684624 - 4684875 + | hypothetical protein RPA4142 4684872 - 4685276 + | PilT protein, N-terminal nnrR 4685360 - 4686070 + | nitric oxide responsive transcriptional regulator NnrR RPA4144 4686267 - 4686043 - | hypothetical protein TERM 3313 4686290 - 4686312 + H 78 -10.4 -4.06419 | TCCGTTGACCCGCCA CGCTGACGCC CGG GGCGACTGCG TTCTTTGTCGCGCAA nirK2 4686505 - 4687617 + | dissimilatory nitrite reductase TERM 3314 4687730 - 4687682 - f 88 -17.1 -3.09635 | gap 2, opp_overlap 4687690 4687699, overlap 4687686 4687690 4687694 ATTGCGAGGAGCGAA GCAA-CGAAGCAATCCAG-TCCA GCGCT CGGAGCTGGATTGCTTCGCTTGC AATGACGGGGTGAGA TERM 3315 4687725 - 4687686 - f 88 -16.7 -3.38316 | gap 1, opp_overlap 4687690 4687699, overlap 4687682 4687690 4687694 CGAGGAGCGAAGCAA CGAAGCAATCCAG-TCCA GCGCT CGGAGCTGGATTGCTTCG CTTGCAATGACGGGG RPA4146 4687786 - 4688667 + | hypothetical protein TERM 3316 4689936 - 4689918 - g 74 -5.8 -4.57073 | opp_overlap 4689918, overlap 4689919 GACTTGCGCGAAAAA TCGCTGCG GCT CGCTGCGC ATCTGCTTGAATACG TERM 3317 4690176 - 4690148 - g 84 -17.3 -3.14132 | opp_overlap 4690168 CTGTCTGCGCATCAA CCGGCTCGCCCGC AGC GCCGGCGCGCCGG TCGCCAAGGGCGCCG RPA4147 4688895 - 4690361 + | thymidine phosphorylase prsA 4690358 - 4691269 + | phosphoribosylpyrophosphate synthetase RPA4149 4691266 - 4692894 + | Beta-lactamase-like TERM 3318 4692982 - 4692968 - T 74 -12.8 -3.27475 | opp_overlap 4692973, overlap 4692966 CTCGGCATTAGAACA CCGCCG CGC CGGCGG ATCGCGCGATTCGCT RPA4150 4693706 - 4693308 - | hypothetical protein RPA4151 4693809 - 4694681 + | LysR family transcriptional regulator fbpA 4694801 - 4695811 + | extracellular solute-binding protein, family 1 TERM 3319 4695888 - 4695858 - f 77 -13.8 -3.31144 | CCCTCATCCTGAGAA GCCCGGCGAAGCCC TGA GGGCGAAGCCGGGC GTGTCGACGGATGAA TERM 3320 4695965 - 4695912 - g 90 -18.4 -3.07227 | gap 3, opp_overlap 4695957, overlap 4695915 GGATGAAACCACAGA TCACGTCCTCATGGGTCGAGACGGCGC TAC GCGCCGCCTC-ACC-ATGAGGACG-GC GCCTGGTGCGTCCGA TERM 3321 4695963 - 4695915 - g 100 -25.6 -2.74525 | gap 2, opp_overlap 4695957, overlap 4695912 TGAAACCACAGATCA CGTCCTCATGGGTCGAGACGGCGC TAC GCGCCGCCTC-ACC-ATGAGGACG GCGCCTGGTGCGTCC fpbB 4695889 - 4697601 + | binding-protein-dependent transport systems inner membrane component RPA4154 4697718 - 4698356 + | hypothetical protein RPA4155 4699171 - 4698521 - | 3-oxoacid CoA-transferase subunit B RPA4156 4699899 - 4699183 - | 3-oxoacid CoA-transferase subunit A TERM 3322 4699564 - 4699549 - G 72 -11.8 -3.61398 | GGTCTTGGTGAAGAA CGCCGG AATG CCGGCG CCGCCGGCGCGGATC TERM 3323 4700881 - 4700834 - g 75 -4.7 -4.64676 | gap 1, overlap 4700835 CCATCGCCAACAAAA CCAGCCTGTCGCTGATCGGCAC GGTGA GTGCCGA-CAGCGCGTCGCTGC GCAACGCGCTGCGCT RPA4157 4700050 - 4702053 + | hypothetical protein potI 4703011 - 4702211 - | binding-protein-dependent transport systems inner membrane component potH 4704233 - 4703319 - | binding-protein-dependent transport systems inner membrane component RPA4160 4705372 - 4704230 - | spermidine/putrescine ABC transporter ATP-binding subunit TERM 3324 4704929 - 4704872 - G 78 -14.8 -3.23216 | gap 2 GTCGAGCAGCAGCAA CTTCGGCCG-CAGCGCCAGCGC-CCGCG CCAG CGCGACGCGCTGCTGCTGACCGCCGGAG AGCTGATCCGGCTTG RPA4161 4706279 - 4705473 - | hypothetical protein TERM 3325 4705661 - 4705696 + g 73 -15.4 -2.50816 | gap 1, overlap 4705660 ACGTCATCGATAGCG TGTG-CGCGTGCGGCGC GTA GCGCAGCTCGCGGCACA ATTCCTGGCTGGACG TERM 3326 4706304 - 4706323 + H 71 -5.7 -4.31433 | overlap 4706306 CGGCCGCAACGTCTA TTGTCGG ATTTTC CCGACGA TTTCTTGTCGAAATC RPA4162 4706510 - 4707343 + | putative taurine ABC transport system permease protein RPA4163 4707355 - 4708209 + | putative taurine transport system ATP-binding protein RPA4164 4708273 - 4709268 + | aliphatic sulfonate ABC transporter substrate-binding protein RPA4165 4709325 - 4710020 + | hypothetical protein RPA4166 4710032 - 4710985 + | putative nitrilase TERM 3327 4711016 - 4711001 - T 72 -11.8 -3.33696 | overlap 4711002 GCGGCTCCGAACTAA GCGCGG CGCG CCGCGC GGAGTGGGTGATCAG RPA4167 4713766 - 4711028 - | diguanylate cyclase/phosphodiesterase RPA4168 4713876 - 4714976 + | FAD dependent oxidoreductase TERM 3328 4715014 - 4715024 + F 100 -5.4 -5.4505 | opp_overlap 4715012 4714998 4715014, overlap 4714995 GGCGTCAACAAAATA TCGA AAA TCGA TTTTTTGTTGACGGG TERM 3329 4715689 - 4715716 + G 77 -13.4 -3.5394 | gap 1 TCGAGGCGGTGATCA GGCGCGA-CGCCG AGG CGGCGATCGCGGC TTTGGCCAAACATTT RPA4169 4715067 - 4715798 + | GntR family regulatory protein RPA4170 4716074 - 4717276 + | branched chain amino-acid ABC transporter substrate-binding protein RPA4171 4718007 - 4717693 - | hypothetical protein RPA4172 4718449 - 4718090 - | hypothetical protein RPA4173 4719182 - 4718430 - | putative diguanylate cyclase (GGDEF) purE 4719311 - 4719799 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 4719796 - 4720896 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit rpsU 4721053 - 4721316 + | 30S ribosomal protein S21 TERM 3330 4721307 - 4721323 + T 71 -10.8 -3.53012 | CCGTCCGAGCGCGGC GGCGCG CTGAT CGCGCC TTTCGGCGACGAAAC TERM 3331 4721349 - 4721381 + T 100 -17.1 -3.93237 | opp_overlap 4721356, overlap 4721350 4721356 GAAACGAACTGAGTT TGAAGAACGCGGGCC CCG GGCTCGCGTTTTTCG TTGTTGCTTATTTCG TERM 3332 4721350 - 4721380 + T 90 -18.4 -2.94858 | opp_overlap 4721356, overlap 4721349 4721356 AAACGAACTGAGTTT GAAGAACGCGGGCC CCG GGCTCGCGTTTTTC GTTGTTGCTTATTTC TERM 3333 4721356 - 4721374 + T 100 -13.8 -5.00339 | opp_overlap 4721356, overlap 4721350 4721349 ACTGAGTTTGAAGAA CGCGGGCC CCG GGCTCGCG TTTTTCGTTGTTGCT TERM 3334 4721374 - 4721356 - T 75 -11.6 -3.63694 | opp_overlap 4721356 4721350 4721349 ACTGAGTTTGAAGAA CGCGGGCC CCG GGCTCGCG TTTTTCGTTGTTGCT TERM 3335 4721443 - 4721464 + T 76 -13.7 -3.18383 | opp_overlap 4721443 CCCCACACAACAAAA TGCCCGGGT CGAA GCCCGGGCA TTCATGACTGCGGAT TERM 3336 4721464 - 4721443 - T 100 -13 -4.84311 | opp_overlap 4721443 CCCCACACAACAAAA TGCCCGGG TCGAAG CCCGGGCA TTCATGACTGCGGAT RPA4177 4722368 - 4721493 - | hypothetical protein TERM 3337 4722333 - 4722344 + g 77 -5.8 -4.68593 | opp_overlap 4722333 4722332 CACCGACGGCAGAAT CTGC CCGA GCAG TTTTTCGGTGATGAA RPA4178 4722805 - 4722518 - | hypothetical protein RPA4179 4723009 - 4723383 + | hypothetical protein TERM 3338 4723423 - 4723459 + T 71 -8.8 -3.93288 | gap 1, opp_overlap 4723419 4723423 4723434 GAGCGAAGCGACGAA GCAATCCAGAAGCACAG TGGA CTGAGCTG-TGGATTGC TTTGCTTCGCTCGCA TERM 3339 4723535 - 4723514 - T 100 -18.7 -5.61881 | opp_overlap 4723514 4723525 GCCGAAAAACAAAAA CGCCCGGCC TTGC GGCCGGGCG TTTCGTTTCTGGCAA TERM 3340 4723514 - 4723535 + T 100 -18.7 -4.13995 | opp_overlap 4723514, overlap 4723525 GCCGAAAAACAAAAA CGCCCGGCC TTGC GGCCGGGCG TTTCGTTTCTGGCAA pntB 4724965 - 4723562 - | NAD(P) transhydrogenase, beta subunit pntA 4725302 - 4724979 - | nicotinamide nucleotide transhydrogenase, subunit alpha2 pntA 4726455 - 4725328 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 3341 4726378 - 4726431 + g 70 -8.7 -3.90744 | gap 1, overlap 4726381 4726383 GGCGCCGAGAGCTTT CAGCTTCTTGACCGTGTCGGGCGTCG CCG CGACGCGCGGCTCGG-CGGGATCTTG TTCTTTGGCAACAGC TERM 3342 4726383 - 4726426 + g 80 -13.8 -3.63464 | gap 1, overlap 4726381 4726378 CGAGAGCTTTCAGCT TCTTGACCGTGTCGGGCGTCG CCG CGACGCGCGGCTCGG-CGGGA TCTTGTTCTTTGGCA RPA4183 4726807 - 4726655 - | hypothetical protein RPA4184 4727027 - 4727329 + | hypothetical protein RPA4185 4729201 - 4727285 - | peptidase M3B, oligoendopeptidase-like clade 3 TERM 3343 4727838 - 4727818 - G 74 -14.7 -3.02144 | GCATTTCGCCGAACA CGCTGGCAG TCT CCGCCAGCG TCAGCGGCGTCGGCG TERM 3344 4728029 - 4727996 - G 85 -13.9 -4.13767 | gap 2 GGTCGGATGCGAAAA CGCGCCGG-GC-GCC TTGCCG GGCCGCACCGGCGCG TCGATCCAGCGATCG RPA4186 4729537 - 4730202 + | TerC family integral membrane protein RPA4187 4730298 - 4731785 + | two component sigma-54-dependent Fis family transcriptional regulator TERM 3345 4731943 - 4731906 - f 100 -19.9 -3.61239 | overlap 4731927 4731931 GATAGTGACAGACAA CCAAGGCGGCCCGTGGC ACAA GCCACTGACCGCCTTAG CCAATAGCAACTGGG TERM 3346 4734194 - 4734222 + G 74 -12.3 -3.54029 | opp_overlap 4734194 TCGCCGGCGACTACA CCGGCTCGTCGGG CGC CTCGTCGAGCCCG TTCTCGTTCCTGGAG RPA4188 4732135 - 4734309 + | hypothetical protein TERM 3347 4734358 - 4734385 + F 71 -9 -3.74184 | opp_overlap 4734361, overlap 4734361 GTAGCTGAATATTAT CAAGGGCTCGCC GCGA GGCGGGCCCTCA TTGTTAACTTAGATT TERM 3348 4734361 - 4734382 + F 79 -15.1 -2.96329 | opp_overlap 4734361, overlap 4734358 GCTGAATATTATCAA GGGCTCGCC GCGA GGCGGGCCC TCATTGTTAACTTAG TERM 3349 4734382 - 4734361 - f 74 -12.9 -3.27923 | opp_overlap 4734361 4734358 GCTGAATATTATCAA GGGCTCGCC GCGA GGCGGGCCC TCATTGTTAACTTAG TERM 3350 4735300 - 4735283 - g 72 -6.9 -4.2349 | overlap 4735284 GGCGGACATCGAAAA GCGCCGC GACG GCAGCAC CGTCGCCCCGGCCAA TERM 3351 4735386 - 4735372 - g 81 -12.8 -3.80841 | overlap 4735373 ACGACGAGGACGAAA CCGCCG CGA CGGCGG CACCGTCCGGCGCCA TERM 3352 4735454 - 4735421 - g 78 -14.5 -3.2614 | gap 1 GATGGCCGACATCAA GGTCGCGGCCGCCGAC GCG GTCG-CGGCTGCGGCC GGCATGAAGCCGGCC RPA4189 4734594 - 4736255 + | hypothetical protein TERM 3353 4736280 - 4736312 + T 100 -12 -4.59853 | opp_overlap 4736286, overlap 4736283 4736286 CAGGATCCGATCCAA AAAAAACGCCCGGG CTGGT CCCGGGCGTTCTTA TTTTTGGCGCCTTAC TERM 3354 4736283 - 4736309 + T 100 -13.7 -4.40963 | opp_overlap 4736286, overlap 4736280 4736286 GATCCGATCCAAAAA AAACGCCCGGG CTGGT CCCGGGCGTTC TTATTTTTGGCGCCT TERM 3355 4736286 - 4736306 + T 100 -15.4 -4.31587 | opp_overlap 4736286, overlap 4736283 4736280 CCGATCCAAAAAAAA CGCCCGGG CTGGT CCCGGGCG TTCTTATTTTTGGCG TERM 3356 4736306 - 4736286 - T 100 -15.4 -5.81412 | opp_overlap 4736286 4736283 4736280 CCGATCCAAAAAAAA CGCCCGGG CTGGT CCCGGGCG TTCTTATTTTTGGCG RPA4190 4736772 - 4736383 - | hypothetical protein TERM 3357 4736713 - 4736689 - G 75 -9.2 -4.12902 | gap 1 TAATGATTGGGAAAA GCG-GCGGGGC GGTC GCCTCGCGCGC CGCATCTGCGCCGGA RPA4191 4737142 - 4736843 - | hypothetical protein TERM 3358 4737544 - 4737578 + G 70 -9.8 -3.737 | overlap 4737545 4737547 4737571 GGCTGGTGGAACGTG TCGTCGCGAAGCTGCG AGA CGCTGCTGCGCGGTGC TTTGGTGGCGCGTTA RPA4192 4737334 - 4737918 + | hypothetical protein pyk 4737915 - 4739348 + | pyruvate kinase TERM 3359 4739429 - 4739374 - T 83 -11.8 -4.05788 | gap 1, opp_overlap 4739373, overlap 4739375 4739377 CGCCCGCAAACCAAA TCAGCGGTCGT-CATTCCGGGCACGCG TAG CGCGAGCCCGGAATCCATAACCACCGC CTGATTTGCTGCGCC TERM 3360 4739428 - 4739375 - T 81 -15.3 -3.03151 | gap 1, opp_overlap 4739373, overlap 4739374 4739377 GCCCGCAAACCAAAT CAGCGGTCGT-CATTCCGGGCACGCG TAG CGCGAGCCCGGAATCCATAACCACCG CCTGATTTGCTGCGC TERM 3361 4739426 - 4739377 - T 78 -14.3 -3.0693 | gap 1, opp_overlap 4739373, overlap 4739375 4739374 CCGCAAACCAAATCA GCGGTCGT-CATTCCGGGCACGCG TAG CGCGAGCCCGGAATCCATAACCAC CGCCTGATTTGCTGC osmC 4740003 - 4739575 - | OsmC-like protein RPA4195 4741004 - 4740000 - | alpha/beta hydrolase fold RPA4196 4741737 - 4741075 - | TPR repeat-containing protein TERM 3362 4741256 - 4741238 - G 72 -11.7 -3.53811 | GCGAGCGCCCCGAAA TGGCGCG GCTCA CGCGCCA ACACCTGCTCGATGT TERM 3363 4741781 - 4741761 - R 100 -18.3 -4.04318 | overlap 4741773 TGTAGACACGACAAA GCGCGCTGC AAA GCAGCGCGC GCGTCACACCGGCGT TERM 3364 4741831 - 4741807 - R 76 -11.4 -3.70902 | gap 1, overlap 4741773 GGCGTGAGATGGAAA GCG-CGAGCCG CGAG CGGCCCGGCGC AAATCAGCCCTGGCG rpmJ 4741960 - 4741835 - | 50S ribosomal protein L36 TERM 3365 4742048 - 4742018 - H 91 -9.7 -4.47679 | gap 2, opp_overlap 4742018 4742037 4742040 AATGCAAAACATAAA CGCCCCGCCGGCGAG GAG CCCGCC--CGGGACG GTGTTTATCTATCCA RPA4198 4742272 - 4743141 + | amidohydrolase 2 TERM 3366 4743734 - 4743790 + G 79 -11.5 -3.82205 | gap 2 AAGGTGTTCAAGCCG CATC-CGCGCGCCTATGCGCTG-GCCG AGGCA CGGCTCGGCGTGGCGCCGCGCGAGATG TTGTTCGTGTCTTCG RPA4199 4743290 - 4744027 + | putative 2-haloacid halidohydrolase IVA RPA4200 4744104 - 4744586 + | YbaK/prolyl-tRNA synthetase associated domain-containing protein TERM 3367 4744596 - 4744613 + T 74 -14.1 -2.8507 | opp_overlap 4744596, overlap 4744593 CCGTGAACATGACAA CGGGGCC CGCG GGCCCCG TCATTGCTTGCATCA TERM 3368 4744613 - 4744596 - T 79 -14.1 -3.52073 | opp_overlap 4744593 4744596 CCGTGAACATGACAA CGGGGCC CGCG GGCCCCG TCATTGCTTGCATCA RPA4201 4744950 - 4744660 - | hypothetical protein RPA4202 4746449 - 4745124 - | methyl-accepting chemotaxis sensory transducer TERM 3369 4745580 - 4745553 - GR 89 -11.2 -4.21194 | gap 1 CGCCACCACCGAAAA GCCGCG-GCCGGC GTC ACCGGCGCGCGCC GCCTCGATCGTGGCA RPA4203 4746945 - 4746424 - | methyl-accepting chemotaxis sensory transducer TERM 3370 4746859 - 4746875 + gr 78 -10.1 -4.08216 | GTTGGCGTAGGTGAT CCGGCCT TTC AGGTCGG TTTTGGACACGATGA RPA4204 4747441 - 4747181 - | hypothetical protein RPA4205 4747662 - 4749023 + | PST family polysaccharide export protein TERM 3371 4749297 - 4749281 - T 71 -5.1 -4.4767 | overlap 4749283 CCACCGACGACAAAA TCCGAAC GGC GTTCGCA AAGGCGCCCTGCTGA RPA4206 4750256 - 4749468 - | 3-hydroxybutyrate dehydrogenase RPA4207 4751444 - 4750305 - | patatin-like phospholipase domain-containing protein RPA4208 4752054 - 4751539 - | allergen V5/Tpx-1-like protein TERM 3372 4752287 - 4752251 - R 91 -12.2 -4.26903 | gap 1, overlap 4752252 TTGAGGGCATCAAAA CGGC-AACGGCCCGGAC TTGC GTCCGGGCCGCAAGCAG TCGCCGTGGAGGTTC TERM 3373 4752285 - 4752252 - R 70 -12.3 -3.1582 | overlap 4752251 TGAGGGCATCAAAAC GGCAACGGCCCGGAC TTGC GTCCGGGCCGCAAGC AGTCGCCGTGGAGGT glnA 4753338 - 4752301 - | glutamine synthetase II TERM 3374 4753470 - 4753455 - H 74 -10.4 -3.72984 | CCAGAATGAGCCAAA TCGCCG CAGG CGGCGA GGCCGGAGCCGGCAC TERM 3375 4753533 - 4753505 - H 84 -8.8 -4.4648 | gap 1, overlap 4753507 ATTTCGACGAGAAAA CCGGCGGC-GCAC CATC ATGCAGCCGCCCG CAAAAACGCCCACGG RPA4210 4753765 - 4754016 + | hypothetical protein TERM 3376 4754068 - 4754090 + T 100 -9.1 -5.06414 | gap 1, opp_overlap 4754068 AGAGCGACTGACGAA GGGCCG-GCG CACG CGTTCGGCCC TTTTTGTTGCGCCGA glsA 4755053 - 4754118 - | glutaminase RPA4212 4755709 - 4755200 - | hypothetical protein RPA4213 4757351 - 4755696 - | sulfite reductase hemoprotein subunit TERM 3377 4756743 - 4756720 - G 75 -7.3 -4.42386 | GTCCGACCGATAAAA GGGCTGCGA CCAAGC CCGCCGCCC ACCAGCACTTCGAAG TERM 3378 4756754 - 4756776 + g 79 -13.4 -3.62522 | CGCCCACCAGCACTT CGAAGCCGGT CTC ACCGGCGTCG TTCTTGACCAGCTTC RPA4214 4757676 - 4757362 - | hypothetical protein TERM 3379 4757593 - 4757647 + g 73 -12.1 -3.46629 | gap 1, opp_overlap 4757595, overlap 4757595 CTTCGCGGTTCGGTA AATCACCACGCCGTCGGTGGTG-CGG TTCG CAGTCACCACCGACGGACCGGTGATC TTGATCTTCTGTTGC TERM 3380 4757595 - 4757645 + g 78 -14.7 -3.29445 | gap 1, opp_overlap 4757595, overlap 4757593 TCGCGGTTCGGTAAA TCACCACGCCGTCGGTGGTG-CGG TTCG CAGTCACCACCGACGGACCGGTGA TCTTGATCTTCTGTT TERM 3381 4757645 - 4757595 - G 89 -16.9 -3.53012 | gap 1, opp_overlap 4757595 4757593 TCGCGGTTCGGTAAA TCACCACGCCGTCGGTGGTG-CGG TTCG CAGTCACCACCGACGGACCGGTGA TCTTGATCTTCTGTT cysG 4759109 - 4757673 - | uroporphyrin-III C-methyltransferase TERM 3382 4757895 - 4757864 - G 70 -13 -3.02144 | gap 1 TCACCCGTGCGAACA CGCCGACCG-GCG TATCGGC CGCGCGGCCGGCG GCGAGCAGCCCGTCA TERM 3383 4759340 - 4759290 - H 74 -9.8 -3.72576 | gap 2, overlap 4759291 GCTGGGTGGAGCAAA CGCCGTGCCGCCATTCCGGC TCCCGCGACTCCC GCCGGA-TGGCGGC-CGGCT AGAGTGACAGCCGGC TERM 3384 4759339 - 4759291 - H 70 -13.3 -2.83403 | gap 2, overlap 4759290 CTGGGTGGAGCAAAC GCCGTGCCGCCATTCCGGC TCCCGCGACTCCC GCCGGA-TGGCGGC-CGGC TAGAGTGACAGCCGG TERM 3385 4759470 - 4759485 + H 71 -6 -4.36914 | opp_overlap 4759471, overlap 4759471 ATTTGACCCCTGAAA AGGCGC CAGC GCGCCG TTTTCTCGCGAGACA TERM 3386 4759484 - 4759471 - H 76 -9.5 -4.09685 | opp_overlap 4759471 4759470 TTTGACCCCTGAAAA GGCGC CAGC GCGCC GTTTTCTCGCGAGAC TERM 3387 4760158 - 4760140 - g 77 -13.1 -3.61715 | CACCGGCCTGAAGAA GCCGGCG CAGTT CGCCGGC TTCCGCGGCGATGCC TERM 3388 4760287 - 4760255 - g 72 -11.9 -3.59087 | opp_overlap 4760262 4760263, overlap 4760247 AACACCATCGGCAAA GACGATCCGGCCGGC GTC GCCGACCTGGTCATC GAGTCGGCGGTGTCG glcB 4759508 - 4761682 + | malate synthase G TERM 3389 4761705 - 4761740 + F 90 -13.5 -4.08216 | gap 2, opp_overlap 4761714, overlap 4761711 4761714 CACGCCTGTTACTTC GCTACAGAACCTCCCCC GCAA GGGGGAGGTTCT-T-GC TTTTAGAGCGCATGA TERM 3390 4761711 - 4761736 + F 100 -19.1 -3.66908 | opp_overlap 4761714, overlap 4761705 4761714 TGTTACTTCGCTACA GAACCTCCCCC GCAA GGGGGAGGTTC TTGCTTTTAGAGCGC TERM 3391 4761714 - 4761733 + F 93 -15 -3.965 | opp_overlap 4761714, overlap 4761711 4761705 TACTTCGCTACAGAA CCTCCCCC GCAA GGGGGAGG TTCTTGCTTTTAGAG TERM 3392 4761733 - 4761714 - f 83 -15 -3.48593 | opp_overlap 4761714 4761711 4761705 TACTTCGCTACAGAA CCTCCCCC GCAA GGGGGAGG TTCTTGCTTTTAGAG RPA4217 4761873 - 4762073 + | hypothetical protein TERM 3393 4762097 - 4762116 + T 100 -12.1 -5.63517 | opp_overlap 4762097 GCAGTGAATCGAAAA GCCCCGG CACGCA CCGGGGC TTTTTTGTTTGAGCA TERM 3394 4762116 - 4762097 - T 95 -12.8 -4.28774 | opp_overlap 4762097 GCAGTGAATCGAAAA GCCCCGGC ACGC ACCGGGGC TTTTTTGTTTGAGCA TERM 3395 4762199 - 4762180 - T 100 -16.4 -5.26119 | opp_overlap 4762178 4762177 TGCCGAAAAACAAAA GGCCGGGC AGAT GCCCGGCC GGATTGCTGGCTTAG RPA4218 4762372 - 4762211 - | hypothetical protein RPA4219 4763191 - 4762529 - | hypothetical protein RPA4220 4763981 - 4763214 - | ErfK/YbiS/YcfS/YnhG TERM 3396 4764353 - 4764375 + G 72 -6.9 -4.2461 | overlap 4764346 GTGATCTTGCTGGTC GGCCTGCTG TATGT CGGCAAGCC TTTCTTCCTGCCGAT RPA4221 4764203 - 4765318 + | hypothetical protein TERM 3397 4765408 - 4765387 - T 75 -12.3 -3.64703 | CCCCTCTTACGCAAA CATCCGCCC TGCG AGGCGGATG TCGGTATCAGCTTGA RPA4222 4765847 - 4765452 - | hypothetical protein TERM 3398 4766077 - 4766110 + r 100 -21.1 -3.81488 | gap 1, opp_overlap 4766079 CCGAAGCCGGCGATA CAGGGCGCGGCTGTGT GAT GC-CAGCCGCGCCCTG TTCTATTTGAGGCAA TERM 3399 4766108 - 4766079 - R 90 -17.9 -2.87881 | opp_overlap 4766077 GAAGCCGGCGATACA GGGCGCGGCTG TGTGATGC CAGCCGCGCCC TGTTCTATTTGAGGC TERM 3400 4766194 - 4766162 - R 83 -13.3 -3.92542 | opp_overlap 4766162 4766163 4766166, overlap 4766166 CCGATCTCCAAAGAA GTAACGCCGCCCGGC TGG GCCGGACGGCGTCGT CTTCTCAGGGACGTA TERM 3401 4766163 - 4766193 + r 80 -14.6 -3.21395 | opp_overlap 4766162 4766166, overlap 4766162 4766166 CGATCTCCAAAGAAG TAACGCCGCCCGGC TGG GCCGGACGGCGTCG TCTTCTCAGGGACGT TERM 3402 4766166 - 4766190 + r 86 -18.5 -2.80074 | opp_overlap 4766162 4766166, overlap 4766163 4766162 TCTCCAAAGAAGTAA CGCCGCCCGGC TGG GCCGGACGGCG TCGTCTTCTCAGGGA TERM 3403 4766190 - 4766166 - R 100 -20.7 -3.61652 | opp_overlap 4766166 4766163 4766162, overlap 4766162 TCTCCAAAGAAGTAA CGCCGCCCGGC TGG GCCGGACGGCG TCGTCTTCTCAGGGA RPA4223 4767029 - 4766223 - | two-component response regulator TERM 3404 4766788 - 4766742 - G 81 -10.8 -4.08571 | gap 3, opp_overlap 4766747 4766749, overlap 4766736 CGACAACAGCAGAAA CGCCTG-GC-GCGGCAG-CGGCG TTAT CGCCGACAGCCGCCGCTCGGACG GCATCGGCAGGGTTC TERM 3405 4766884 - 4766864 - G 72 -4.5 -4.45261 | overlap 4766857 4766867 TAAACAAACGGAAAA GACCCGGAC GGG GACCGTGCC GCTCGTCGAGCAGGG TERM 3406 4767200 - 4767184 - g 79 -4.3 -4.77079 | GACAGATCAAGAAAA CCCTCGA AGT TCAGGGG ACTTGACCATGGGGA RPA4224 4767160 - 4767444 + | hypothetical protein RPA4225 4767444 - 4767989 + | RNA polymerase sigma factor TERM 3407 4768131 - 4768095 - T 72 -13.7 -2.78463 | opp_overlap 4768099 AGCCTCGCGAGCAGA CCGAGATCTGGCCGAGC GTC GTTCGGCCAGATCTTTG CTGTTTGCGCGTCTA TERM 3408 4768099 - 4768127 + T 100 -19.7 -4.00532 | opp_overlap 4768095 TCGCGAGCAGACCGA GATCTGGCCGAGC GTC GTTCGGCCAGATC TTTGCTGTTTGCGCG RPA4226 4769913 - 4768147 - | signal transduction histidine kinase TERM 3409 4768533 - 4768512 - G 70 -10.9 -3.59372 | gap 1, overlap 4768510 CCAACTCAAAGAACA GCAGCGACAG GCT CTG-CGCTGC CCGCGCGCTGACCGC TERM 3410 4770069 - 4770096 + r 73 -3.2 -4.67982 | gap 1, overlap 4770080 4770082 CAAGCCGATGGCTCA GGCCGACC-GCCG CGG CGTCAGGCCGCCC TTTTCTTCGATAAAG ureG 4770695 - 4770066 - | urease accessory protein UreG TERM 3411 4770122 - 4770138 + g 71 -2.9 -4.67904 | opp_overlap 4770120, overlap 4770120 4770125 TAAAGCCGATAATGC GATCGAG GCC TTCGCTC TTTTTCAGATTGGTC RPA4228 4770919 - 4771263 + | hypothetical protein RPA4229 4771282 - 4771632 + | hypothetical protein TERM 3412 4771871 - 4771856 - f 91 -11.8 -4.386 | opp_overlap 4771856 4771858 CAATTTGCGAGAAAA CCCGGC ACTT GCCGGG GCGGGTGTAGTGATT RPA4230 4772098 - 4772382 + | hypothetical protein RPA4231 4774562 - 4772451 - | putative oxidoreductase TERM 3413 4772530 - 4772511 - G 81 -15 -3.58343 | opp_overlap 4772508 4772517 4772518 TTTATTATCGTGAAA CGCCGCAC CACC GTGCGGCG CGATGGATTCTGCGC TERM 3414 4773359 - 4773327 - G 89 -11.1 -4.1822 | overlap 4773306 4773329 GTGCACCGCAACAAA CAGGTCCTCGCGGGC GAA GCCGGCACGGACCAG CTCCTGCTCCGGCGC TERM 3415 4773357 - 4773329 - G 77 -12.3 -3.69068 | overlap 4773327 GCACCGCAACAAACA GGTCCTCGCGGGC GAA GCCGGCACGGACC AGCTCCTGCTCCGGC TERM 3416 4773750 - 4773711 - G 74 -12.2 -3.57462 | overlap 4773748 GACCGCATGTGCAAA CGCTTCGATCTGCGCC TCCGGCAC GCCGCAGATCGAAGAG GCCCATGCTGGCGTC TERM 3417 4774560 - 4774582 + g 70 -2.6 -4.66833 | overlap 4774562 4774570 CGCGGCACGCTGGTT CATGTGCGAA TCG TTAGCACGAG TTTTTCCGGTTGAGA RPA4232 4774697 - 4775023 + | hypothetical protein RPA4233 4776275 - 4775037 - | cyclic nucleotide regulated K+ channel aadR 4777047 - 4776328 - | anaerobic aromatic degradation regulator TERM 3418 4777200 - 4777221 + G 77 -7.3 -4.56597 | overlap 4777186 CCGTCATGCATGGTG CAAGTCGTT GTTT GGCGACTTG TTTTTACCGACGGGC RPA4235 4777176 - 4777559 + | putative cytochrome c, class I RPA4236 4778715 - 4777519 - | hypothetical protein RPA4237 4779507 - 4778728 - | ABC transporter ATP-binding protein RPA4238 4780646 - 4779510 - | hypothetical protein TERM 3419 4781044 - 4780986 - g 70 -6 -4.19371 | gap 3, opp_overlap 4780991 4780995, overlap 4780988 4780989 GAAATCTGGAAGAAA CACCGCGAAGCCTG-CCGGGTGGCGCGGC AGCG GCCGCACCAGCCGGACAGCCTT-G-GTCA TCTGGTGCACCGTCC TERM 3420 4781044 - 4780988 - g 70 -10 -3.68725 | gap 1, opp_overlap 4780991 4780995, overlap 4780986 4780989 AATCTGGAAGAAACA CCGCGAAGCCTG-CCGGGTGGCGCGGC AGCG GCCGCACCAGCCGGACAGCCTTGGTCA TCTGGTGCACCGTCC TERM 3421 4780991 - 4781041 + G 77 -16.1 -2.66316 | gap 1, opp_overlap 4780986 4780988 4780989, overlap 4780995 CTGGAAGAAACACCG CGAAGCCTG-CCGGGTGGCGCGGC AGCG GCCGCACCAGCCGGACAGCCTTGG TCATCTGGTGCACCG TERM 3422 4780995 - 4781037 + G 80 -15.5 -3.25719 | gap 1, opp_overlap 4780986 4780988 4780989, overlap 4780991 AAGAAACACCGCGAA GCCTG-CCGGGTGGCGCGGC AGCG GCCGCACCAGCCGGACAGCC TTGGTCATCTGGTGC RPA4239 4780758 - 4781219 + | hypothetical protein RPA4240 4783971 - 4781248 - | GCN5-related N-acetyltransferase TERM 3423 4782495 - 4782479 - G 88 -10.1 -4.42062 | TAGGCCGCAAACAAA CCGCTGA TCT CCAGCGG ATCGAGCCAGGTGCG TERM 3424 4783083 - 4783109 + g 72 -11.5 -3.53811 | gap 1, opp_overlap 4783069 4783068 TCGCGACCCGCTTGC CGCGCGG-CGCG CTGA CGCGGCCGAGCG TTTCGGCACAGTCGA RPA4241 4784503 - 4784111 - | CBS domain-containing protein TERM 3425 4785380 - 4785420 + G 86 -17.6 -3.17212 | gap 1, opp_overlap 4785360, overlap 4785378 GCCGCAATGCGCTCG GCCGGCTGCGCC-CGTTGC TGGA GCAGCGCGGTGTGGCCGGC TTCGTCCGCTGGTGC RPA4242 4784794 - 4786353 + | hypothetical protein phaC 4788101 - 4786335 - | putative poly-beta-hydroxyalkanoate synthase TERM 3426 4786433 - 4786388 - G 76 -14.8 -3.14132 | gap 2 GTGCGCCCGGATCAA CG-TCCGGCAATCCGAT-GCGC GGCG GCGCGACCGGCTCGCCGGAGCG GGTACCGAGCCAATG RPA4244 4789204 - 4788368 - | hypothetical protein TERM 3427 4788831 - 4788811 - G 73 -12.5 -3.41051 | overlap 4788812 CGATCTCCATCACAA GGTCGGCCG GAT CGGCCGACG CGAACGGATCGGTGA TERM 3428 4788830 - 4788812 - G 74 -16 -2.64416 | overlap 4788811 GATCTCCATCACAAG GTCGGCCG GAT CGGCCGAC GCGAACGGATCGGTG RPA4245 4789394 - 4790227 + | hypothetical protein RPA4246 4790314 - 4791045 + | CBS/transport-associated domain-containing protein TERM 3429 4791049 - 4791064 + F 83 -11.8 -4.07868 | opp_overlap 4791048 4791049 AAAGCAAGTTGAAAT CGGCGC GCAG GCGCCG TTTATGTGGCTCTGA TERM 3430 4791079 - 4791107 + F 71 -10.9 -3.52787 | overlap 4791080 4791082 GTTTATGTGGCTCTG ACAGCGGTGGGCG CTC TGCCTGCCGCTGG TTGTGATGTTGCGTC TERM 3431 4791080 - 4791106 + F 75 -14.4 -2.7119 | overlap 4791079 4791082 TTTATGTGGCTCTGA CAGCGGTGGGCG CTC TGCCTGCCGCTG GTTGTGATGTTGCGT fixL 4791190 - 4792716 + | two component low oxygen sensor histidine kinase fixJ 4792709 - 4793320 + | response regulator FixJ RPA4249 4793406 - 4793798 + | response regulator receiver (CheY-like protein) fixK 4793997 - 4794689 + | transcriptional regulator FixK TERM 3432 4794739 - 4794771 + F 79 -11.4 -3.85698 | gap 1, opp_overlap 4794745, overlap 4794743 4794745 TTTCATCGGATCGGA CAGA-TAGGCCACCA GCAA TGGTGGCCTCTTCTG TTTGTGCCCGAGCCG TERM 3433 4794743 - 4794766 + F 79 -11 -3.89695 | opp_overlap 4794745, overlap 4794739 4794745 ATCGGATCGGACAGA TAGGCCACCA GCAA TGGTGGCCTC TTCTGTTTGTGCCCG TERM 3434 4794745 - 4794764 + F 79 -13.6 -3.53279 | opp_overlap 4794745, overlap 4794743 4794739 CGGATCGGACAGATA GGCCACCA GCAA TGGTGGCC TCTTCTGTTTGTGCC TERM 3435 4794764 - 4794745 - f 75 -13.6 -3.00022 | opp_overlap 4794745 4794743 4794739 CGGATCGGACAGATA GGCCACCA GCAA TGGTGGCC TCTTCTGTTTGTGCC oahs 4795019 - 4796326 + | O-acetylhomoserine/O-acetylserine sulfhydrylase nuoN2 4797843 - 4796479 - | NADH dehydrogenase (quinone) TERM 3436 4796776 - 4796746 - G 76 -14.7 -3.14344 | gap 1, overlap 4796731 CAGCTTGGCGATGAA GCCGCCCGCC-GCC GGCA GGCCGGCGAGCGAC AATAGCGACAGTGAC TERM 3437 4797526 - 4797484 - G 71 -9.7 -3.87815 | gap 1 TTCGATGCCGAGAAA CAGCGTCGCGGCGT-GGCCG GCGC CGGCCAACGTGGCGGCACCG ATCGCCACCAGCACC TERM 3438 4797683 - 4797657 - G 82 -17.2 -3.01712 | CGTCGTCGGTGAAGA GCGCGCCCATCG GTG CGGCGGGCGCGC CGATCCGCAGCAGCA nuoM2 4799296 - 4797854 - | proton-translocating NADH-quinone oxidoreductase, chain M TERM 3439 4798796 - 4798834 + g 83 -12.5 -4.07133 | gap 1, opp_overlap 4798787 4798788 CAACAAGCCGAAGCC GGCGACCGCGTTGAAGAT CAAG AATTTCAGCGCGG-CGCC TTCTTTGTCGCCATG nuoL2 4801356 - 4799287 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 3440 4801022 - 4801004 - G 70 -6.6 -4.1711 | overlap 4800982 ATCACCGCGAAGAAA CGGCGCAG ATC CTGCAGCG GCTCGGATGCCATGT nuoK2 4801667 - 4801359 - | NADH-ubiquinone oxidoreductase, chain 4L nuoJ2 4802170 - 4801664 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 nuoI2 4802688 - 4802167 - | NADH dehydrogenase subunit I nuoH2 4803644 - 4802685 - | respiratory-chain NADH dehydrogenase, subunit 1 nuoG2 4806274 - 4803641 - | NADH dehydrogenase subunit G nuoF2 4807557 - 4806271 - | NADH dehydrogenase (quinone) nuoE2 4808042 - 4807554 - | NADH dehydrogenase subunit E nuoCD 4809784 - 4808039 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoB2 4810407 - 4809781 - | NADH-quinone oxidoreductase, B subunit nuoA2 4810793 - 4810404 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ndvA 4811238 - 4813037 + | cyclic beta-1,2-glucan ABC transporter TERM 3441 4814419 - 4814385 - g 87 -7.3 -5.06414 | gap 2, overlap 4814414 GGTCGCGAAGAAAAA CGACACCG-CTTCA-GA AGG TCATGAAGCCAGCGTCG ACCAGGCCGCGCCGA TERM 3442 4814495 - 4814478 - g 71 -9.1 -3.7732 | overlap 4814491 4814492 CGTCGATACCAACAA GCCGGCT ACCA AACCGGC TGCTGGTGCCAAGCC RPA4266 4813207 - 4814661 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 3443 4814718 - 4814743 + F 70 -11.8 -3.18199 | overlap 4814717 TTGATTCCATTGACC GCCGCCGCAC TGCGGC GTGCGGCCGC TTGCGTTCGGAGTTG TERM 3444 4814912 - 4814888 - f 70 -9.9 -3.6149 | ATGCAACAATCATAA TGCACGGAGCG ATG CGCTTCGGGCA GGCGACACGAGGAAC RPA4267 4814933 - 4816624 + | acyl-CoA synthetase TERM 3445 4816647 - 4816697 + F 89 -16.1 -3.41795 | gap 1 CCTCGTCTTGCCCCT CCGCGTCATTCCGGG-GCGCGGCC GAAC GGCCGCGAACCCGGAATCAAGCAG TTATCGTGCCCGTTT RPA4268 4816864 - 4817349 + | peroxiredoxin-like protein TERM 3446 4817414 - 4817384 - T 74 -12.5 -3.27298 | opp_overlap 4817384 4817389 CGCCCCAACGACCAA CGTCATCGCCCGG CTTGT CCGGGCGATCTCG TATTCCAGGGCGTTC TERM 3447 4817384 - 4817414 + T 71 -12.5 -3.02461 | opp_overlap 4817384, overlap 4817389 CGCCCCAACGACCAA CGTCATCGCCCGG CTTGT CCGGGCGATCTCG TATTCCAGGGCGTTC TERM 3448 4817389 - 4817409 + T 74 -14 -2.9155 | opp_overlap 4817384, overlap 4817384 CAACGACCAACGTCA TCGCCCGG CTTGT CCGGGCGA TCTCGTATTCCAGGG RPA4269 4817967 - 4817500 - | ribonuclease H TERM 3449 4817828 - 4817856 + g 70 -2.2 -4.59773 | overlap 4817824 TCCATCCGATTGTTG GTGGTGTGGGGC TCCCC GCCCTTCAGCTC TTTTTCGACGTCGCC thrB 4818947 - 4817964 - | homoserine kinase TERM 3450 4818677 - 4818640 - G 73 -10.6 -3.72695 | ACCCCGTCGAGGAAA CTGATGATCGC-CGCCGG ACGG CCGGCGAGCG-TCGCCAG CGTACGGCCTTCGCG TERM 3451 4819034 - 4819012 - R 81 -12.6 -3.72576 | opp_overlap 4819019 4819033, overlap 4818998 4818997 CGGGGCGCGATGAAA GGGCGCCCCC GGG GGAGGCCCCC GGGTCTTGCCGGTTA TERM 3452 4819019 - 4819037 + r 88 -17.4 -3.07947 | opp_overlap 4818998 4818997 4819012, overlap 4819033 CGATGAAAGGGCGCC CCCGGGGG AGG CCCCCGGG TCTTGCCGGTTATTC TERM 3453 4819044 - 4819095 + r 83 -7.3 -4.63218 | gap 3, overlap 4819033 4819046 GCCCCCGGGTCTTGC CG-GTTATTCCGCGGCGTCG-GGGCG CAG CACCCGCGGCACCG-GGAAGAACTCG TTTTCTTCCGCCGCC lytB2 4820009 - 4819047 - | hydroxymethylbutenyl pyrophosphate reductase TERM 3454 4820084 - 4820056 - H 70 -7.4 -4.10007 | gap 2 AGAACCGGCGGAAAA CG-GGCGCA-CGCC AAC GGCGTTGCGCAGCG GTCGAACGGGGTAGG RPA4272 4820269 - 4820985 + | hypothetical protein RPA4273 4821614 - 4821237 - | hypothetical protein TERM 3455 4821277 - 4821327 + g 82 -16.1 -3.2614 | gap 2, overlap 4821278 CCATCGCGCATCCGC TCGGC-GTGCTGCCGCCGCG-CCAG CGC CTGATCGCGGCGGCGGCGCTGCAGG TTGGTGTACAGCGTG TERM 3456 4821278 - 4821326 + g 80 -17.4 -2.5547 | gap 2, overlap 4821277 CATCGCGCATCCGCT CGGC-GTGCTGCCGCCGCG-CCAG CGC CTGATCGCGGCGGCGGCGCTGCAG GTTGGTGTACAGCGT TERM 3457 4821761 - 4821811 + r 71 -13.9 -2.61144 | gap 1, opp_overlap 4821748, overlap 4821760 4821758 GACGCGCCTTTGGTA GTACCCGCGGC-CTCATGCCTCGG ATCG CCGAAGCGCGAGCGCCGCGGAAAC GTCTTTCGACGCTCC RPA4274 4823204 - 4822209 - | hypothetical protein TERM 3458 4823648 - 4823679 + H 93 -19.6 -3.06796 | gap 1, overlap 4823650 CGCATTGACAGTTCG GAGGGCGGATGAGCG CAG CG-TCATCCGCCCTC TTCACTGGCGTCGCG TERM 3459 4823650 - 4823677 + H 84 -16.4 -3.09327 | gap 1, overlap 4823648 CATTGACAGTTCGGA GGGCGGATGAGCG CAG CG-TCATCCGCCC TCTTCACTGGCGTCG RPA4275 4823656 - 4824075 + | hypothetical protein RPA4276 4824214 - 4824513 + | hypothetical protein RPA4277 4826624 - 4827253 + | hypothetical protein RPA4278 4827318 - 4827884 + | hypothetical protein RPA4279 4828105 - 4828641 + | hypothetical protein RPA4280 4829655 - 4828657 - | AraC family transcriptional regulator RPA4281 4830173 - 4831345 + | hypothetical protein RPA4282 4831532 - 4832005 + | photopigment and puc activator RPA4283 4832923 - 4832018 - | LysR family transcriptional regulator RPA4284 4833016 - 4833657 + | YceI like family protein RPA4285 4833734 - 4834324 + | hypothetical protein RPA4286 4834367 - 4835170 + | catalytic LigB subunit of aromatic ring-opening dioxygenase RPA4287 4836173 - 4835541 - | hypothetical protein TERM 3460 4835998 - 4835979 - G 74 -10 -3.87994 | gap 1 ATCGAGCCCGACAAA CGC-CAGCG CGT CGCTGAGCG CCGACGGATCGCTGG RPA4288 4836310 - 4837083 + | hypothetical protein RPA4289 4837083 - 4837640 + | putative dual use protein Tyr:Ser/Thr phosphatase TERM 3461 4837661 - 4837673 + F 95 -10.5 -4.56597 | overlap 4837660 AGCGTGGGCGCGATC CGCCG CAG CGGCG TTTTTCCGCAGCGCG RPA4290 4837773 - 4838222 + | hypothetical protein pucBb 4838558 - 4838713 + | light harvesting protein B-800-850, beta chain B (antenna pigment protein, beta chain B) pucAb 4838726 - 4838926 + | light harvesting protein B-800-850, alpha chain B (antenna pigment protein, alpha chain B) (LH II-B alpha) TERM 3462 4838948 - 4839000 + F 86 -15.6 -3.55548 | opp_overlap 4838953 4838955, overlap 4838950 4838955 TACTTCTTCGAAGCT GACAAGACGCCCGTCGTGGCCTCT CGTGC GGAGGTCCCGGCGGGTGTTTTGTA TTTGGCGGCATCTTG TERM 3463 4838950 - 4838998 + F 93 -18.2 -3.35224 | opp_overlap 4838953 4838955, overlap 4838948 4838955 CTTCTTCGAAGCTGA CAAGACGCCCGTCGTGGCCTCT CGTGC GGAGGTCCCGGCGGGTGTTTTG TATTTGGCGGCATCT TERM 3464 4838955 - 4838993 + F 100 -14.5 -4.78848 | opp_overlap 4838953 4838955, overlap 4838950 4838948 TCGAAGCTGACAAGA CGCCCGTCGTGGCCTCT CGTGC GGAGGTCCCGGCGGGTG TTTTGTATTTGGCGG RPA4293 4839395 - 4839613 + | hypothetical protein TERM 3465 4839638 - 4839660 + T 100 -18.4 -4.4078 | CACGCTTCATCCCCA CGCGCCGCGG CCT TCGCGGCGCG TTTTGATTCGGAGGA TERM 3466 4839715 - 4839765 + T 74 -12.5 -3.28712 | gap 1, opp_overlap 4839714 GCGCTCCTCATCAAG CCGTGTCATTCCGGG-ATGCGCGC GTCA GCACGCAGACCCGGAATCTCGCGG TTGTAGCGAAGGAAA TERM 3467 4839796 - 4839783 - T 75 -3.1 -4.88407 | gap 1, overlap 4839786 4839790 4839791 GTAGCGAAGGAAAAA GCAGCA AGG TGC-GC GACAGCGCCACGCCA TERM 3468 4839959 - 4839910 - T 74 -9.9 -3.73224 | gap 1, opp_overlap 4839910 4839912, overlap 4839912 4839913 GCATCCCTCACCAAA CACCGTCATTCCGGG-ATGCGTGC GAA GCACGCAGACCCGGAATCTCGCGG TTGTAGCAAAGGAAG TERM 3469 4839957 - 4839912 - T 71 -11.1 -3.45027 | gap 1, opp_overlap 4839912 4839910, overlap 4839910 4839913 ATCCCTCACCAAACA CCGTCATTCCGGG-ATGCGTGC GAA GCACGCAGACCCGGAATCTCGC GGTTGTAGCAAAGGA TERM 3470 4839956 - 4839913 - T 74 -14.6 -2.66695 | gap 1, opp_overlap 4839912 4839910, overlap 4839912 4839910 TCCCTCACCAAACAC CGTCATTCCGGG-ATGCGTGC GAA GCACGCAGACCCGGAATCTCG CGGTTGTAGCAAAGG TERM 3471 4840015 - 4839977 - T 71 -8.7 -3.91541 | gap 1, opp_overlap 4839990, overlap 4839974 GTAGCAAAGGAAGAA GCAGC-GAGGTGCGCGGC CGGC GCCGCGCCGCTCAGGCGC GGGCGCCGTGGCCGT TERM 3472 4839990 - 4840029 + T 84 -15.8 -3.37796 | gap 3, opp_overlap 4839974 4839977 AAGCAGCGAGGTGCG CGGCC--GGCG-CCGCGCC GCTCA GGCGCGGGCGCCGTGGCCG TTCTAACTACTCGCC RPA4294 4841637 - 4840036 - | hypothetical protein TERM 3473 4840069 - 4840089 + g 71 -3.2 -4.66163 | gap 1 GAAGGCGTCGTTGAA GGCGCGTTC GCCG GGGC-CGCC TTTTTCGATGGCGAT purA 4842967 - 4841675 - | adenylosuccinate synthetase TERM 3474 4842592 - 4842608 + g 75 -9.3 -4.09685 | GGGTCGTGCCGATCG CGCCGGC CTT GGCGGCG TTTTCGCGGGTGGCG TERM 3475 4843204 - 4843191 - R 71 -9.5 -3.68351 | CCGTCACCATCCAAA CCCGC CAGA GCGGG GCTGATGCGCTCGGC RPA4296 4843796 - 4843263 - | hypothetical protein TERM 3476 4843838 - 4843862 + H 75 -2.9 -4.94972 | gap 2 GCTGACGCGATCGGC TCCG-GC-ACG GGCGA CGTTGCACGGA TTTTTGGTTCTGATC RPA4297 4843966 - 4844790 + | putative aldose reductase RPA4298 4845043 - 4845702 + | ATP/GTP-binding motif-containing protein TERM 3477 4846629 - 4846650 + G 75 -11.5 -3.71487 | opp_overlap 4846611 CGGCGTCCGGCTGAT CGGCGCCAA CCGC TCGGCGCCG TTCTTCCATCTGGTG RPA4299 4845862 - 4846791 + | DMT family permease RPA4300 4847325 - 4848356 + | DMT family permease TERM 3478 4848383 - 4848362 - T 81 -15.1 -3.05384 | CCGGCGGTGACGGAA CGCGCAGCC GTCA GGCCGCGCG CACCGTGTGCATGAA RPA4301 4848566 - 4848372 - | hypothetical protein TERM 3479 4848463 - 4848505 + g 72 -14 -2.99471 | GCGGCATGCAGCACT TCACCGGCCGCAGCCCCGGT GCC GCTGGCGCTGTAGCCGGCGA TGTCTCTCAAGATCC TERM 3480 4848801 - 4848764 - R 100 -15.6 -4.13014 | gap 1, overlap 4848766 CTTACACCCTCAAAA TACTGCGGCGCCGCCGT GCGAG ACGGCGGCGCCG-AGCG CGTAACCGCAACTGA TERM 3481 4848799 - 4848766 - R 100 -20.4 -3.66256 | gap 1, overlap 4848764 TACACCCTCAAAATA CTGCGGCGCCGCCGT GCGAG ACGGCGGCGCCG-AG CGCGTAACCGCAACT RPA4302 4851020 - 4848828 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 3482 4849259 - 4849234 - G 74 -12.5 -3.58343 | gap 1, opp_overlap 4849245 4849246, overlap 4849235 GCCACGACCGCGAAA CCGCG-GCCGGC CTC GCCGGCGCGCGC CGCCTCGATGGTGGC TERM 3483 4849258 - 4849235 - G 75 -16 -2.74792 | gap 1, opp_overlap 4849245 4849246, overlap 4849234 CCACGACCGCGAAAC CGCG-GCCGGC CTC GCCGGCGCGCG CCGCCTCGATGGTGG TERM 3484 4850928 - 4850985 + g 72 -14.9 -2.75081 | gap 1, overlap 4850936 CAGGACGCTGTAGCC GATCAGGATCAGGCTGG-CGCCGGTC AGGCAGA GGCCGGCGACCAGCGCGATCTTGACC TGAATTTTGCGGATG RPA4303 4852121 - 4851150 - | rubrerythrin RPA4304 4852302 - 4853657 + | hypothetical protein TERM 3485 4853763 - 4853800 + T 72 -7.8 -4.13767 | gap 3, overlap 4853762 4853765 ACTTCAACATCTCCA G--ATTCCGGGTTCGCCGC TGC GCGGCGC-CCCGGAATGAC TTTTGCGATGGGAGG TERM 3486 4853765 - 4853796 + T 81 -16.6 -2.75577 | gap 1, overlap 4853762 4853763 TTCAACATCTCCAGA TTCCGGGTTCGCCGC TGC GCGGCGC-CCCGGAA TGACTTTTGCGATGG RPA4305 4854190 - 4853852 - | hypothetical protein RPA4306 4855959 - 4854274 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 3487 4856129 - 4856093 - R 91 -9.4 -4.55295 | gap 1, overlap 4856095 4856096 GGCCTTAGAAACAAA GACGCCCCTGGCAGACC GTCG GATCTGCCGGGGGC-TA AAGAAATGCGATCGC TERM 3488 4856128 - 4856095 - R 89 -14.5 -3.88703 | overlap 4856093 4856096 CCTTAGAAACAAAGA CGCCCCTGGCAGACC GTCG GATCTGCCGGGGGCT AAAGAAATGCGATCG TERM 3489 4856127 - 4856096 - R 90 -18 -2.92499 | overlap 4856095 4856093 CTTAGAAACAAAGAC GCCCCTGGCAGACC GTCG GATCTGCCGGGGGC TAAAGAAATGCGATC RPA4307 4857851 - 4856166 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 3490 4856486 - 4856506 + g 76 -8.2 -4.20783 | TGGTCGAGGACTGCA TCGCCGCG ACCTG CGCGGAGA TTTCTTCGGTCGCCT TERM 3491 4858024 - 4857997 - R 100 -20.6 -4.87133 | opp_overlap 4857997 AGCGTGCAAACAAAA GCCCTCCCCCCG TTAC CGGGGAGAGGGC TTGGTGTCGTCGTGC TERM 3492 4857997 - 4858024 + r 93 -18.4 -3.30443 | opp_overlap 4857997 AGCGTGCAAACAAAA GCCCTCCCCCCG TTAC CGGGGAGAGGGC TTGGTGTCGTCGTGC serA2 4859685 - 4858096 - | D-3-phosphoglycerate dehydrogenase serC 4861027 - 4859855 - | phosphoserine aminotransferase TERM 3493 4861238 - 4861204 - R 76 -12.8 -3.41961 | opp_overlap 4861236, overlap 4861207 ACGAGCAGGAACGAA CAACGCGCGCCCGC TGGAATG GCCGACGCGCGCTG GACATCAGTAAGTTC TERM 3494 4861235 - 4861207 - R 79 -10.9 -3.84246 | overlap 4861204 AGCAGGAACGAACAA CGCGCGCCCGC TGGAATG GCCGACGCGCG CTGGACATCAGTAAG RPA4310 4861714 - 4861265 - | hypothetical protein RPA4311 4863057 - 4861753 - | methyl-accepting chemotaxis sensory transducer RPA4312 4863556 - 4863032 - | methyl-accepting chemotaxis sensory transducer RPA4313 4864199 - 4863729 - | putative acetyltransfersase gstA2 4864804 - 4864211 - | glutathione S-transferase RPA4315 4865697 - 4864870 - | hypothetical protein TERM 3495 4865773 - 4865751 - R 100 -20.6 -5.03994 | opp_overlap 4865745 4865745 TCGGACACAGAAAAA CGGCGCGGGA AGC TCCCGCGCCG TTAAGACTTGTAAAC RPA4316 4866679 - 4865804 - | hypothetical protein TERM 3496 4866919 - 4866947 + r 87 -18.9 -2.71144 | opp_overlap 4866919 GCGCACGACCAAAAA CGGCTCCAGTTCC ATC GGAACCGGAGCCG TGATTCGAGCGGATC TERM 3497 4866947 - 4866919 - R 100 -21.1 -4.77036 | opp_overlap 4866919 GCGCACGACCAAAAA CGGCTCCAGTTCC ATC GGAACCGGAGCCG TGATTCGAGCGGATC RPA4317 4868342 - 4866990 - | major facilitator superfamily MFS_1 TERM 3498 4867737 - 4867692 - G 82 -16.9 -3.05816 | gap 1 CGACGGCTGACCGAA CGGCACCACGATCAGCGCCG CCAGCAC CGG-GCCGAGCGCGGTGCCG GCATTGCCGCCGACC mrsA 4869778 - 4868426 - | phosphoglucosamine mutase TERM 3499 4869341 - 4869365 + g 89 -17.9 -3.29144 | overlap 4869344 GCGGCGGGCGCGGCC GAGGCTGGCGC TCT GCGCCAGCTTC TTGTCGAGGGACTCG TERM 3500 4869344 - 4869362 + g 90 -16 -3.78934 | overlap 4869341 GCGGGCGCGGCCGAG GCTGGCGC TCT GCGCCAGC TTCTTGTCGAGGGAC TERM 3501 4869943 - 4869892 - R 86 -6.7 -5.0538 | gap 2, opp_overlap 4869903 4869907, overlap 4869893 4869902 4869904 GGGGACTTCAAAAAA TGTAATCAAAGATTACGCCGCCGAC CTCG GCCGGCGGCGTAA-CTT-GCTGAAA ATACAGTCTTATCCG TERM 3502 4869934 - 4869902 - R 100 -16.4 -4.00683 | gap 1, opp_overlap 4869903 4869907, overlap 4869893 4869892 4869904 AAAAATGTAATCAAA GATTACGCCGCCGAC CTCG GCCGGCGGCGTAA-C TTGCTGAAAATACAG TERM 3503 4869903 - 4869934 + r 80 -14.4 -3.15544 | opp_overlap 4869893 4869902 4869892 4869904, overlap 4869907 AAAATGTAATCAAAG ATTACGCCGCCGAC CTCG GCCGGCGGCGTAAC TTGCTGAAAATACAG TERM 3504 4869933 - 4869904 - R 100 -20.1 -3.57278 | opp_overlap 4869903 4869907, overlap 4869893 4869902 4869892 AAATGTAATCAAAGA TTACGCCGCCGAC CTCG GCCGGCGGCGTAA CTTGCTGAAAATACA TERM 3505 4869907 - 4869930 + r 77 -15.2 -2.56715 | opp_overlap 4869904 4869902 4869892, overlap 4869903 TGTAATCAAAGATTA CGCCGCCGAC CTCG GCCGGCGGCG TAACTTGCTGAAAAT RPA4319 4870141 - 4869980 - | hypothetical protein TERM 3506 4870081 - 4870094 + g 83 -3.8 -5.24416 | CCAACCCCTCATTGA GCTG TTCTTC CAGC TTTTTCTTCTCCTTG TERM 3507 4870199 - 4870181 - H 81 -10.2 -4.18494 | GACTTGGACGGAAAA CGCGCTGC AAC GCAGCGAG TTCCCAGGCTTCGCC lldA 4870306 - 4871445 + | L-lactate dehydrogenase (cytochrome) TERM 3508 4871457 - 4871431 - f 71 -13.7 -2.65774 | opp_overlap 4871429 4871424 4871422, overlap 4871430 GAGATCGACGAGAAG GTGCTGGCGGA TTAAT TCCGCCTGCAC AATTCCGTCTGTCAT TERM 3509 4871519 - 4871561 + F 71 -13.7 -2.54896 | gap 2, opp_overlap 4871523, overlap 4871515 4871523 4871535 CGATGACAGGCTCAG CGAAGCAATCCAGAG--ATGC AGT GCATGGCGCTGGATTGCTTCG TCGCTTCGCTCCGCG paaG3 4871637 - 4872452 + | putative enoyl-CoA hydratase paaG TERM 3510 4872761 - 4872713 - g 72 -13.8 -3.04792 | CGATCATCTGCAAGA TCGCGGTACGCGCCGGATTCGA ACCGG TCGAAGCCGGCACGCTCGACGA GGTCGTCGAGCTGAC RPA4322 4872601 - 4873059 + | response regulator receiver (CheY-like protein) TERM 3511 4873616 - 4873626 + G 77 -5.4 -4.67353 | ATTGAATACATTTCA TCAG CAT CTGA TTTTTGGGTCGCTGC RPA4323 4873169 - 4874002 + | hypothetical protein TERM 3512 4874295 - 4874305 + G 82 -4.6 -4.89477 | overlap 4874291 4874300 TTGGCTATTCATCGC GGCT TGC GGCC TTTTGTTCTTCAAGG RPA4324 4873999 - 4874490 + | hypothetical protein aroE 4875458 - 4874622 - | shikimate 5-dehydrogenase TERM 3513 4875579 - 4875532 - R 79 -9.1 -4.19238 | gap 3, overlap 4875533 GCGTCAATCGCAAAA CGC-G-CCGCCGCGACG-GAAGTC GGT GGCCTCACGCCGAGGCGGGCTGCG GCGCGGTCGCCTCCT sulP 4877311 - 4875560 - | sulfate transporter family protein RPA4327 4877622 - 4877353 - | XRE family transcriptional regulator TERM 3514 4877693 - 4877729 + r 100 -23.9 -3.54741 | opp_overlap 4877694, overlap 4877694 TCACGCAAATAAAAA ACGGCTGGACTGATGTC TGA GACATCAGTCCAGCCGC TTTGGGACAGTCATA TERM 3515 4877728 - 4877694 - R 100 -27.4 -5.65927 | opp_overlap 4877693 4877694 CACGCAAATAAAAAA CGGCTGGACTGATGTC TGA GACATCAGTCCAGCCG CTTTGGGACAGTCAT TERM 3516 4877694 - 4877728 + r 100 -27.4 -2.7263 | opp_overlap 4877694, overlap 4877693 CACGCAAATAAAAAA CGGCTGGACTGATGTC TGA GACATCAGTCCAGCCG CTTTGGGACAGTCAT RPA4328 4879841 - 4877790 - | elongation factor G TERM 3517 4879189 - 4879217 + g 70 -11.7 -3.44622 | overlap 4879174 GCGTCGTCGTGATCG GCGAGCTTCTCGA GCA TCGAGAACCGCGC TTCCTTCTCACGGTC TERM 3518 4879464 - 4879449 - G 83 -3.2 -5.1356 | opp_overlap 4879449, overlap 4879443 GTTCAGGAACAAAAA TCTGGG AATA CCGAGA TCTTCGAGTTCGCGC TERM 3519 4880014 - 4879981 - R 100 -17.5 -4.84274 | opp_overlap 4879982, overlap 4879982 CAAGGACACCAAAAA TTTGCGCTGCGACGC GTTT GCATCGCAGCGCAAT GTTGCAAAACAGGAA TERM 3520 4879982 - 4880013 + r 91 -18.8 -3.01712 | opp_overlap 4879981 4879982 AAGGACACCAAAAAT TTGCGCTGCGACGC GTTT GCATCGCAGCGCAA TGTTGCAAAACAGGA TERM 3521 4880013 - 4879982 - R 100 -21 -3.4948 | opp_overlap 4879982, overlap 4879981 AAGGACACCAAAAAT TTGCGCTGCGACGC GTTT GCATCGCAGCGCAA TGTTGCAAAACAGGA RPA4329 4880527 - 4880054 - | hypothetical protein TERM 3522 4880666 - 4880637 - R 74 -12 -3.409 | overlap 4880635 AAATCTTCAATAACA CCCCCGGGCGCG CTGCGC CGCGACCGGGTG CCCGAGCGTACAAAA TERM 3523 4880699 - 4880718 + r 100 -16.4 -4.4078 | opp_overlap 4880699 GTCCAGACGCAAAAA GGGCCCGC GCTG GCGGGCCC TTTTCGTTACGACGC TERM 3524 4880718 - 4880699 - R 100 -16.4 -4.70659 | opp_overlap 4880699 GTCCAGACGCAAAAA GGGCCCGC GCTG GCGGGCCC TTTTCGTTACGACGC RPA4330 4881272 - 4880757 - | hypothetical protein TERM 3525 4881347 - 4881317 - R 100 -9 -4.84359 | opp_overlap 4881321 CGACGGCGACAAAAA GGAAGCGTCTTGTC CAA AACAAGGCGCTTTC GCAGTTTTGGAACGA TERM 3526 4881321 - 4881343 + r 70 -9.9 -3.66666 | opp_overlap 4881317 GGCGACAAAAAGGAA GCGTCTTGT CCAAA ACAAGGCGC TTTCGCAGTTTTGGA aatA 4882632 - 4881397 - | aspartate aminotransferase TERM 3527 4881558 - 4881571 + g 75 -4.5 -4.65895 | CGGTGACGAAGTCCT GGTCG GTCT CGATC TTTTTGCCTGACGGC TERM 3528 4883314 - 4883339 + G 72 -11.9 -3.56568 | gap 1, overlap 4883312 TCTTCGAGCAGCACG CGCTGGAGCCGA ACA TCGGCTC-GGCG TATTTCTGGCTGTGC gstA1 4883013 - 4883666 + | glutathione S-transferase TERM 3529 4883762 - 4883780 + F 86 -13.8 -3.90856 | opp_overlap 4883755 4883758 ACGACAATTCACCTA CGCCGGTG ATT CGCCGGCG TTTGGTTCGAGGATT RPA4333 4884085 - 4885248 + | glucose sorbosone dehydrogenase TERM 3530 4885393 - 4885435 + F 91 -9.6 -4.56597 | overlap 4885394 4885395 CGCCGATCAACGTCC CCAGCGGTCCCCGTCAGTCG CCG CGTCTGACCGGGGCCGCACC TTTTTGAGCGGCGCA TERM 3531 4885394 - 4885434 + F 74 -13.1 -3.33744 | overlap 4885393 4885395 GCCGATCAACGTCCC CAGCGGTCCCCGTCAGTCG CCG CGTCTGACCGGGGCCGCAC CTTTTTGAGCGGCGC TERM 3532 4885395 - 4885433 + F 80 -16.6 -2.60032 | overlap 4885394 4885393 CCGATCAACGTCCCC AGCGGTCCCCGTCAGTCG CCG CGTCTGACCGGGGCCGCA CCTTTTTGAGCGGCG TERM 3533 4885755 - 4885783 + G 76 -14.5 -3.1552 | overlap 4885753 GACCTGGCCGGTGTT CGGCGCGCTGGCA CGC TGGCAGCGCACCG TGTTCATCGATCGCC RPA4334 4885462 - 4886310 + | phospholipid/glycerol acyltransferase RPA4335 4887036 - 4886317 - | replicative DNA helicase RPA4336 4887317 - 4888258 + | aldo/keto reductase TERM 3534 4888275 - 4888333 + TF 100 -23.9 -4.0492 | gap 1, opp_overlap 4888306 TCGCGGCGGCGCCTC CTCACCCCGTCATTCCGGG-GCGCGCCC AAAA GGGCGCGCACCCGGAATCTCGAGGTTAG TTTGTATGGAGGTTC TERM 3535 4888568 - 4888614 + TF 73 -12.7 -3.15027 | overlap 4888568 4888573 ACCTCGTCCGACACG CCTGCGCCGCCGCCGCGGCGG CTGAT CTGCGCCGGCTGCGGCGCCGA GTTTTCGTGCACGAT TERM 3536 4888568 - 4888615 + TF 95 -12.5 -4.2558 | gap 1, overlap 4888568 4888573 ACCTCGTCCGACACG C-CTGCGCCGCCGCCGCGGCGG CTGAT CTGCGCCGGCTGCGGCGCCGAG TTTTCGTGCACGATG TERM 3537 4888573 - 4888589 + TF 77 -15.1 -2.62263 | overlap 4888568 4888568 GTCCGACACGCCTGC GCCGCCG CCG CGGCGGC TGATCTGCGCCGGCT RPA4338 4890058 - 4889378 - | TetR family transcriptional regulator RPA4337 4888708 - 4889451 + | HAD-superfamily hydrolase subfamily IA, variant 3 TERM 3538 4890590 - 4890556 - g 86 -17.3 -3.26947 | gap 2, opp_overlap 4890575 CAAGCCGGAGATCAA GCTGGCGATGCCGCCGA CCT TCGGCGGCA-C-CCAGC GGCTGCCGCGCCTCG RPA4339 4890140 - 4890931 + | enoyl-CoA hydratase ligE 4891722 - 4890919 - | putative lignin beta-ether hydrolase TERM 3539 4891790 - 4891821 + r 83 -16.6 -2.91274 | gap 1 ATGCATCGACCGTCA TTCCGGG-GCGCCGC GCA GCGGCGAACCCGGAA TCTCGTTGGACTACC RPA4341 4893896 - 4891911 - | Beta-lactamase-like TERM 3540 4894198 - 4894155 - g 73 -12.2 -3.42503 | opp_overlap 4894196 GCCGAAGATCTACAA GCCGCGGCCCAGGCCGGCGT GATC ACCCCGGCGCAGGAGGCGGC GCTCCGCGCCTTCCT RPA4342 4894128 - 4895180 + | hypothetical protein TERM 3541 4895466 - 4895413 - f 71 -10.7 -3.48276 | gap 1, overlap 4895414 GCCGCCGCCAGACAA TTCGCGCGACCGCCGCAC-CGGCGGC GAA GCCGCCGTGCATCGCGGCCGCGCCTC GACACCCAATCCAGG TERM 3542 4895465 - 4895414 - f 75 -14.2 -2.68823 | gap 1, overlap 4895413 CCGCCGCCAGACAAT TCGCGCGACCGCCGCAC-CGGCGGC GAA GCCGCCGTGCATCGCGGCCGCGCCT CGACACCCAATCCAG TERM 3543 4895749 - 4895708 - g 70 -11.3 -3.53012 | overlap 4895693 GCCCTTGGCGTCAAA GCGACCGCCGAGGCACTGG AGAG CCTGATCCGCGACGGCCGC CCCGAGTTCAAAGGC TERM 3544 4897926 - 4897874 - g 95 -17 -3.86194 | gap 2, overlap 4897855 AAGGTCGCCGACAAA GCCGGCAGCTACGCCG-G-CGCCAAA CGC TACGGCGACGCGGCGAACCTGCCGGC CGATGCGGGCAAAGG TERM 3545 4898143 - 4898108 - g 70 -6 -4.26351 | gap 1 CACGAATTCAAGAAA GTCCAGCGCC-CCAAGC CGC GCAAGCCGACGCTGGAC GAAATGGGGCCGGGC uvrB 4895687 - 4898275 + | excinuclease ABC subunit B RPA4344 4898366 - 4898599 + | hypothetical protein RPA4345 4899241 - 4898852 - | hypothetical protein TERM 3546 4899005 - 4899031 + g 79 -11.4 -3.75897 | overlap 4899007 4899008 GACGAGCTTGGGGCG CTTGCCGCCGTG AGA CGCGGCGGCCTG TTTCAGTTCGGACTT TERM 3547 4899007 - 4899029 + g 73 -12.6 -3.46068 | overlap 4899005 4899008 CGAGCTTGGGGCGCT TGCCGCCGTG AGA CGCGGCGGCC TGTTTCAGTTCGGAC TERM 3548 4899008 - 4899028 + g 77 -16.1 -2.6732 | overlap 4899007 4899005 GAGCTTGGGGCGCTT GCCGCCGTG AGA CGCGGCGGC CTGTTTCAGTTCGGA TERM 3549 4899495 - 4899517 + r 100 -17.7 -4.28774 | opp_overlap 4899495 CGGCCGCAACAAAAA GGGCGGCGC ATGCG GCGCCGCCC TTTTCAATTAGCTCG TERM 3550 4899517 - 4899495 - R 100 -17.7 -5.06414 | opp_overlap 4899495 CGGCCGCAACAAAAA GGGCGGCGC ATGCG GCGCCGCCC TTTTCAATTAGCTCG RPA4346 4900841 - 4899588 - | acetyl-CoA acetyltransferase TERM 3551 4901339 - 4901315 - g 74 -14.9 -3.02461 | CAAGGCGGCCGAAGA TGCCGCCACGG CTG CCGCGGCGGCG TCCAAGCCGAAGGCG RPA4347 4901055 - 4901489 + | hypothetical protein TERM 3552 4901781 - 4901755 - f 88 -7.2 -4.83615 | opp_overlap 4901755, overlap 4901757 GAGGCTGCAGAAAAA CCGGCAAAACCA TGG CGGTTTGGCCCG CGGGATGCCTGCCAA TERM 3553 4901841 - 4901825 - f 71 -9.5 -3.75153 | GCCTGCGAATCTAAA TTTGTGC AAT GCACAAA AGACGATTGCAATTG RPA4348 4901974 - 4902405 + | hypothetical protein TERM 3554 4902852 - 4902825 - g 70 -10.6 -3.61517 | gap 1 AGCTGCGGTCAACAA CGTCAACTCGCTG ATC CAGCGCGTTG-CG GGCACCTCGCTCGGC RPA4349 4902523 - 4903053 + | hypothetical protein TERM 3555 4903133 - 4903112 - T 95 -10.1 -4.61566 | opp_overlap 4903112, overlap 4903107 CTTGAAACGACAAAA GCAGCCATC GCGA GGTGGCTGC TTTTTTGCGTGCTAT TERM 3556 4903112 - 4903133 + T 100 -12.3 -5.11613 | opp_overlap 4903112 4903107 CTTGAAACGACAAAA GCAGCCATC GCGA GGTGGCTGC TTTTTTGCGTGCTAT RPA4350 4903349 - 4903203 - | hypothetical protein RPA4351 4903980 - 4903498 - | MaoC-like dehydratase RPA4352 4904468 - 4903989 - | MaoC-like dehydratase RPA4353 4904554 - 4904847 + | hypothetical protein TERM 3557 4904981 - 4904935 - T 83 -13.2 -3.9122 | gap 3, overlap 4904940 CAGTTCTGCAAAGAA CGAG--ATTCCGGGTTCGCTCGC TGGC GCGAGCGC-CCCGGAATGACTCG ATGAGACGTTGCCGG TERM 3558 4904974 - 4904940 - T 84 -16.5 -3.06509 | gap 1, overlap 4904935 CTGCAAAGAACGAGA TTCCGGGTTCGCTCGC TGGC GCGAGCGC-CCCGGAA TGACTCGATGAGACG RPA4354 4906104 - 4905007 - | translation-associated GTPase pth 4906852 - 4906232 - | peptidyl-tRNA hydrolase TERM 3559 4906764 - 4906731 - G 100 -16.8 -4.07568 | gap 1, opp_overlap 4906730 4906731, overlap 4906734 GTCTCGCCCTGAAAA CGACGGCGCCATGGC GAGAA GCCATGACGCCG-CG CGATTTCGTCGATGA TERM 3560 4906762 - 4906734 - G 86 -18.2 -3.08032 | opp_overlap 4906731 4906730, overlap 4906731 TCGCCCTGAAAACGA CGGCGCCATGGC GAGAA GCCATGACGCCG CGCGATTTCGTCGAT ctc 4907566 - 4906874 - | 50S ribosomal protein L25/general stress protein Ctc TERM 3561 4906961 - 4906988 + g 87 -14.8 -3.78235 | gap 1 AGCAGGCGCAGCAGC GGCCGCAGGCGCG GCA CCCGCC-GCGGCC TTGTCTTCGTTGTAG TERM 3562 4907613 - 4907599 - R 95 -12.8 -4.32046 | opp_overlap 4907609 TTGTCAAAAATTAAA GGCCGC AAC GCGGCC TCGTGCAGACGCCGC RPA4357 4908142 - 4907864 - | hypothetical protein TERM 3563 4908993 - 4909045 + G 77 -16.3 -2.51471 | gap 1, overlap 4908992 CTGTTCGTCATCCTG GCGCTGATGATCCGCGCCGG-CGC CCTGAA GCGGCCGGGCCTGATCATCGGCGC GTTCCTGACCTTCTA lgt 4908396 - 4909256 + | prolipoprotein diacylglyceryl transferase RPA4359 4909253 - 4910392 + | hypothetical protein RPA4360 4910389 - 4911162 + | hypothetical protein RPA4361 4911395 - 4912003 + | hypothetical protein ribP 4912172 - 4913125 + | ribose-phosphate pyrophosphokinase TERM 3564 4913309 - 4913280 - T 78 -14.3 -3.00498 | gap 1 CACAGGGGATATAGA TTCC-GGGCTCGCG CTT CGCGCGCCCCGGAA TGACGGAATAGTTCG ribH 4913871 - 4913326 - | riboflavin synthase subunit beta TERM 3565 4913972 - 4914000 + H 75 -4.5 -4.77165 | GCGAATTCCGCGCCC CGGACTCGGCT GACGCGA ATCCGATTCCG TTTTGTTCTCGCGCC TERM 3566 4914469 - 4914450 - g 73 -9.2 -3.90112 | CGCGCCGCAACGAAA CGCTGCGA CTGA TCGCGGCG ATCAACGAACAGCTT RPA4364 4914215 - 4914715 + | hypothetical protein RPA4365 4914712 - 4915140 + | GCN5-related N-acetyltransferase TERM 3567 4915148 - 4915163 + F 72 -11.8 -3.31322 | CCTTCTGATCGCTGC GCGCGG GGCA CCGCGC TTGTGACCCCTTCGA TERM 3568 4915669 - 4915622 - g 72 -14 -3.04144 | gap 1 GGGCGATGCCGAACA CCCCGGCCGCGATCGGCCGCGGT ATC ACCGTCGCGG-TCGCGGCCGGTA ACGTGACAGCCGCGC proC 4915228 - 4916070 + | pyrroline-5-carboxylate reductase RPA4367 4917727 - 4916339 - | periplasmic sensor signal transduction histidine kinase TERM 3569 4917932 - 4917958 + r 93 -19.5 -3.10164 | GCCGAAGCGCGGCGA CCTCTCCCCGC GCAGG GCGGGGAGAGG TTGCGTCGTGCATGG RPA4368 4918728 - 4918006 - | two-component transcriptional regulator RPA4369 4919276 - 4918725 - | MarR family transcriptional regulator ilvE 4919559 - 4920671 + | branched-chain amino acid aminotransferase TERM 3570 4920755 - 4920708 - T 72 -12 -3.28712 | gap 1, opp_overlap 4920709, overlap 4920709 4920711 GGCGTGCCCTCACAA CGAGTCATTCCGTG-GCGCTCAC GAC GTGAGCGAACCCGGAATGTCTCT TGTTAACAACCTCGA TERM 3571 4920754 - 4920709 - T 77 -15.5 -2.57132 | gap 1, opp_overlap 4920709, overlap 4920708 4920711 GCGTGCCCTCACAAC GAGTCATTCCGTG-GCGCTCAC GAC GTGAGCGAACCCGGAATGTCTC TTGTTAACAACCTCG TERM 3572 4920709 - 4920754 + T 86 -15.5 -3.62046 | gap 1, opp_overlap 4920708 4920709 4920711 GCGTGCCCTCACAAC GAGTCATTCCGTG-GCGCTCAC GAC GTGAGCGAACCCGGAATGTCTC TTGTTAACAACCTCG TERM 3573 4920880 - 4920829 - T 100 -26.6 -2.65442 | opp_overlap 4920835 4920836 ACACCATCGACACGA GCACGGCGCACTCCCTCGCCCCGC CCTT GCGGGGAGAGGGAGTGCATTGTGC TCGGGGCGCAGGAAA TERM 3574 4920835 - 4920874 + T 100 -23.6 -3.40403 | opp_overlap 4920829, overlap 4920836 TCGACACGAGCACGG CGCACTCCCTCGCCCCGC CCTT GCGGGGAGAGGGAGTGCA TTGTGCTCGGGGCGC TERM 3575 4920836 - 4920873 + T 100 -27.1 -2.64099 | opp_overlap 4920829, overlap 4920835 CGACACGAGCACGGC GCACTCCCTCGCCCCGC CCTT GCGGGGAGAGGGAGTGC ATTGTGCTCGGGGCG mutL 4922705 - 4920918 - | DNA mismatch repair protein RPA4372 4923360 - 4922941 - | hypothetical protein RPA4373 4925136 - 4923703 - | protease TERM 3576 4925045 - 4925027 - G 79 -11.6 -3.86897 | GGGACGGCCGACAAA GCGACGGC GAG GCCGACGC AGGCGGCGAGCGCGA TERM 3577 4925118 - 4925075 - G 89 -10.8 -4.25283 | overlap 4925076 AGCCGCTGAGCAAAA CCGGCGCGGGTCACGACGAC AGCA GCGGTCACGCGCCGCGCCGA CAACAGATCGATGCT RPA4374 4926614 - 4925133 - | putative protease RPA4375 4927427 - 4926693 - | hypothetical protein TERM 3578 4927012 - 4927044 + g 73 -14.1 -3.18274 | TGCGACGGCGTCAGC GGCTGGGCCGATTCC CAC GGATTCGGCTTGGCC TTGGCTTCGGCTGCC lspA 4928039 - 4927491 - | signal peptidase II TERM 3579 4927663 - 4927633 - G 74 -7.4 -4.17023 | TGAAGCAGGGCAAAA TCGACCACCGCGCC ATA GGCCAGCCGGTCGA TCGCATTGCCGATCG ileS 4931165 - 4928148 - | isoleucyl-tRNA synthetase TERM 3580 4930144 - 4930096 - G 74 -15.4 -2.60075 | opp_overlap 4930076, overlap 4930095 GCGGTGTGAACGAAG CCGGTGCCGGTG-TCGTCGGTGAC GTG ATCACCGTCGAGCAGCGGCA-CGG TGAACTCATAGCCGC RPA4378 4931919 - 4931347 - | maltose O-acetyltransferase TERM 3581 4931861 - 4931896 + g 70 -4 -4.50058 | opp_overlap 4931880, overlap 4931862 4931863 TCGGCGGCGAGCTCC GG-GCTGCCGGGGCGA TACAGC TCGCCC-GCCAGCATC TTTTCCTTCTCGGTC ribF 4932884 - 4931916 - | riboflavin biosynthesis protein RibF RPA4380 4933702 - 4933007 - | ribonuclease T2 RPA4381 4934268 - 4933807 - | hypothetical protein RPA4382 4934435 - 4934725 + | hypothetical protein RPA4383 4934735 - 4935268 + | hypothetical protein RPA4384 4935410 - 4935790 + | hypothetical protein TERM 3582 4936242 - 4936223 - g 77 -10.6 -3.84246 | overlap 4936224 TGCCGAATGAGGAAA TCCGCCGC AGCG GCGGCGGC ACGCTCGGCGACCTG TERM 3583 4936241 - 4936224 - g 71 -14.1 -2.90227 | overlap 4936223 GCCGAATGAGGAAAT CCGCCGC AGCG GCGGCGG CACGCTCGGCGACCT PA0781 4935808 - 4938261 + | TonB-dependent receptor RPA4386 4938474 - 4938836 + | hypothetical protein TERM 3584 4939192 - 4939171 - g 71 -9.3 -3.81137 | overlap 4939172 GCCCAAAGACTCAAA CCGCAGCCC GGGC GCGCCGCGG GGCAGCGACAGCCTC RPA4387 4938984 - 4941257 + | ferrichrome-iron receptor TERM 3585 4941293 - 4941270 - T 90 -18.2 -2.88579 | opp_overlap 4941274, overlap 4941274 TGAAGTCGCCACACA GCAAGGCGCG TCAG CGCGCCTTGC TCCAATCCGGGCGGA TERM 3586 4941274 - 4941289 + T 70 -11.8 -3.16564 | opp_overlap 4941274 4941270 GTCGCCACACAGCAA GGCGCG TCAG CGCGCC TTGCTCCAATCCGGG TERM 3587 4941289 - 4941274 - T 72 -11.8 -3.32022 | opp_overlap 4941274, overlap 4941270 GTCGCCACACAGCAA GGCGCG TCAG CGCGCC TTGCTCCAATCCGGG RPA4388 4941831 - 4941280 - | GCN5-related N-acetyltransferase RPA4389 4943701 - 4941839 - | small conductance mechanosensitive (MscS) Ion channel TERM 3588 4941905 - 4941931 + g 81 -15 -3.53012 | GCCCGGCGCATCTTC GTCGCCGCCCTG CCG CTGGGCGGCGCC TTTGGCGCGCGCCAC TERM 3589 4942416 - 4942389 - G 79 -11.2 -3.89614 | opp_overlap 4942394 4942403 CCGAACTTGCAGAAA TCGCCGACCCGC ATCG GCTGGTCGGTGA CCAGAGTCAGGCTGC TERM 3590 4943270 - 4943290 + g 86 -8.9 -4.7497 | CTGGAGCTGCTGTGC GACGCTCGG GCC CCAGGCGTC TTTTTCCTGGCTGAG RPA4390 4944241 - 4943753 - | NUDIX hydrolase RPA4391 4944376 - 4945257 + | metallophosphoesterase RPA4392 4945851 - 4945303 - | hypothetical protein TERM 3591 4946050 - 4946003 - R 93 -17.6 -3.53343 | opp_overlap 4946006, overlap 4946004 4946006 AAGGGGCCCCCGAAA CGACGATGGCGGCCCTGACGGG TTGC CCCGACAGGACCGCCAAAGTCC TTGGACGTCTTCTAT TERM 3592 4946049 - 4946004 - R 91 -21.1 -2.71791 | opp_overlap 4946006, overlap 4946003 4946006 AGGGGCCCCCGAAAC GACGATGGCGGCCCTGACGGG TTGC CCCGACAGGACCGCCAAAGTC CTTGGACGTCTTCTA TERM 3593 4946047 - 4946006 - R 90 -17.9 -2.90496 | opp_overlap 4946006, overlap 4946004 4946003 GGGCCCCCGAAACGA CGATGGCGGCCCTGACGGG TTGC CCCGACAGGACCGCCAAAG TCCTTGGACGTCTTC TERM 3594 4946006 - 4946047 + r 78 -15.7 -2.73468 | opp_overlap 4946006 4946004 4946003 GGGCCCCCGAAACGA CGATGGCGGCCCTGACGGG TTGC CCCGACAGGACCGCCAAAG TCCTTGGACGTCTTC RPA4393 4946330 - 4946115 - | hypothetical protein aceA 4947989 - 4946355 - | isocitrate lyase RPA4395 4948203 - 4949645 + | XRE family transcriptional regulator TERM 3595 4951140 - 4951130 - g 79 -8.2 -4.32857 | overlap 4951131 4951132 GGCCTGAAACAGAAA GCCG TTG CGGC CGGGGTGTCGCAAGG RPA4396 4950947 - 4952305 + | lytic murein transglycosylase RPA4397 4952405 - 4953571 + | extracellular ligand-binding receptor RPA4398 4953733 - 4954497 + | branched chain amino acid ABC transporter ATP-binding protein RPA4399 4954639 - 4955631 + | possible branched-chain amino acid transport system ATP-binding protein RPA4400 4955628 - 4956653 + | inner-membrane translocator RPA4401 4956650 - 4957717 + | inner-membrane translocator RPA4402 4958088 - 4958396 + | hypothetical protein TERM 3596 4958459 - 4958425 - f 73 -13 -3.12351 | gap 2, overlap 4958427 GCGCGCGATAGCGAA GACAGGTTCGGCGGCG CTGTC CGCCGCCGAA-CTG-C GGACCGCCAGGAATC TERM 3597 4958458 - 4958427 - f 86 -16.7 -3.12327 | gap 1, overlap 4958425 GCGCGATAGCGAAGA CAGGTTCGGCGGCG CTGTC CGCCGCCGAA-CTG CGGACCGCCAGGAAT RPA4403 4958641 - 4959741 + | morphinone reductase TERM 3598 4959749 - 4959795 + T 70 -12.3 -3.14211 | opp_overlap 4959746 4959749, overlap 4959781 CGCAGTAAGCAAGTA GCTCGGTCATTCCGGG-GCGCGC GCA GCGCGAACCCGGAATC-CCGAGA TTGCTACGACGAGAT TERM 3599 4959843 - 4959810 - T 84 -17.5 -2.82635 | gap 1, opp_overlap 4959781 ATTGCTACGACGAGA TTCCGGGTTCGCTCGC TCC GCGAGCGC-CCCGGAA TGACTCGGGGAGAAG TERM 3600 4960073 - 4960054 - T 100 -15 -4.88228 | opp_overlap 4960054 4960070 ACTGAACAGCAAAAA GGCCGGGA TCGC TCCCGGCC TTTCGATTCTCGCAG TERM 3601 4960054 - 4960073 + T 88 -15 -3.80625 | opp_overlap 4960054, overlap 4960070 ACTGAACAGCAAAAA GGCCGGGA TCGC TCCCGGCC TTTCGATTCTCGCAG RPA4404 4962005 - 4960215 - | extracellular solute-binding protein, family 1 TERM 3602 4962036 - 4962060 + r 79 -13.6 -3.45571 | opp_overlap 4962034 TTGAGCGACACCATT CAGGTCCGGG TTGAT CCCGGATCTG TTCCTCTTTCGCCGG RPA4405 4962407 - 4962078 - | hypothetical protein TERM 3603 4962303 - 4962248 - G 70 -10.2 -3.6269 | gap 1, overlap 4962246 4962249 TCAGCGACAGAAACA GCCGGTCGCCGCGCGTCGTCGGAATCC GCA GGATGCCGACG-CGCTCGACCTCGGGA TCAACCACCGCGAGC RPA4406 4963221 - 4962415 - | binding-protein-dependent transport systems inner membrane component RPA4407 4964123 - 4963221 - | binding-protein-dependent transport systems inner membrane component RPA4408 4965223 - 4964123 - | ATP-binding protein of sugar ABC transporter RPA4409 4966315 - 4965236 - | ATP-binding protein of sugar ABC transporter glpD 4967847 - 4966312 - | glycerol-3-phosphate dehydrogenase glpR 4968840 - 4968043 - | glycerol-3-phosphate regulon repressor GlpR TERM 3604 4968568 - 4968601 + g 70 -6.5 -4.25256 | CAGCGAGCAGCCGTT GGGAATCTGCGCCGC CGCC GCGGCCCCGATCGCC TTCTTTTCCTCGGCG TERM 3605 4968809 - 4968767 - G 75 -15.7 -2.78715 | opp_overlap 4968767 AAGCGCCGCACCAGA TCCTCGACCATCACCCG-GCC CGA GGCGCGGGCGA-GGTTGAGGA TTTCAGACTGACGAT TERM 3606 4968767 - 4968809 + g 83 -15.7 -3.57263 | opp_overlap 4968767 AAGCGCCGCACCAGA TCCTCGACCATCACCCG-GCC CGA GGCGCGGGCGA-GGTTGAGGA TTTCAGACTGACGAT RPA4412 4969645 - 4969028 - | hypothetical protein RPA4413 4970277 - 4969663 - | TetR family transcriptional regulator RPA4414 4973432 - 4970295 - | putative RND efflux transporter RPA4415 4974557 - 4973454 - | putative component of multidrug efflux system TERM 3607 4974117 - 4974081 - G 70 -10.7 -3.53012 | opp_overlap 4974070, overlap 4974082 CTCGGCGCGGGCAAA GCGGGCGCGGGCCTC GTCCGCG GAGGCGCGCGCCTGA TCCATCTGGGCTTCG TERM 3608 4974593 - 4974628 + r 87 -18.6 -2.56596 | overlap 4974554 4974590 AAGGGAACTGTCGAC TGATCTCTGACGATTG TCAA TAATCGTCAGAGATCA TGAATTCGTCACGGA RPA4416 4975148 - 4974669 - | hypothetical protein RPA4417 4977876 - 4975255 - | sensor histidine kinase TERM 3609 4976617 - 4976655 + g 76 -14.6 -3.21416 | GTTGAGGATGCGCAG CAGGTCGTCACCGGAATC GCG GATCGTGGTGACGGCCTG TTGCTGCTCGGGATC RPA4418 4978268 - 4978483 + | CsbD-like protein TERM 3610 4978523 - 4978553 + T 83 -16.3 -2.87132 | gap 1, opp_overlap 4978530, overlap 4978510 4978530 GCGGTCGTCAGTAGG TGC-AAGACCGGCC CTCG GGCCGGTCTTCGCA TGTCTGGAAGAGCCC ggt3 4980174 - 4978588 - | gamma-glutamyltransferase TERM 3611 4979252 - 4979225 - G 86 -17.8 -3.21276 | opp_overlap 4979214, overlap 4979223 TCCTTCGCCAGAATA CGCAGCACGTCG ACAT CGACATGCTGCG GGTCGCCGATGTGCT RPA4420 4980422 - 4980637 + | SlyX TERM 3612 4980780 - 4980730 - T 76 -8.3 -4.17048 | opp_overlap 4980706 4980733 4980772 CCGTCGTGAAAACAA TCTCGG-GATTCCGGGTTCGCTCAC TGC GTGAGCGC-CCCGGAATGACCGTTA GGTCGTAGTTACGAC TERM 3613 4980733 - 4980777 + T 80 -14.4 -3.11687 | opp_overlap 4980730, overlap 4980706 4980772 TCGTGAAAACAATCT CGG-GATTCCGGGTTCGCTCAC TGC GTGAGCGC-CCCGGAATGACCG TTAGGTCGTAGTTAC RPA4421 4982339 - 4980789 - | AMP-dependent synthetase and ligase TERM 3614 4980911 - 4980928 + g 72 -6.9 -4.27316 | overlap 4980879 4980870 GCTGGGTCTTGCCGA CCTGGCC GTTT GTCCAGG TTTTCAGTTCGGCCG RPA4422 4983387 - 4982674 - | Crp/FNR family transcriptional regulator RPA4423 4983931 - 4983518 - | hypothetical protein RPA4424 4984072 - 4984920 + | Beta-lactamase-like RPA4425 4985030 - 4985872 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase RPA4426 4985991 - 4986608 + | glutathione S-transferase ogt1 4987168 - 4986620 - | methylated-DNA--protein-cysteine methyltransferase RPA4428 4987754 - 4987215 - | putative glucosyltransferase I; lipopolysaccharide core biosynthesis TERM 3615 4987692 - 4987712 + g 79 -11.1 -3.93256 | overlap 4987674 ACCGGCAAGATGGCG CGCGATAGC GAT GCAATCGCG TTCTTTGCCGCTCTG RPA4429 4989020 - 4987875 - | hypothetical protein RPA4430 4991355 - 4989025 - | putative TonB-dependent receptor TERM 3616 4991509 - 4991484 - H 100 -16.9 -3.59979 | TGCCTCCACGGCAAA CGCCGCCTCTC GATC GAAAGGCGGCG TTGCCAGAAGGACCG TERM 3617 4992320 - 4992346 + H 100 -14.4 -4.86731 | opp_overlap 4992322, overlap 4992322 AGGCCTCAAACGCAA AACGCCGCCTCT TTT GGAGGCGGCGTG TTTTGTTTGAGCGGA TERM 3618 4992344 - 4992322 - H 100 -16.3 -4.35524 | opp_overlap 4992320 4992322 GCCTCAAACGCAAAA CGCCGCCTC TTTTG GAGGCGGCG TGTTTTGTTTGAGCG TERM 3619 4992322 - 4992344 + H 100 -17 -4.05678 | opp_overlap 4992322, overlap 4992320 GCCTCAAACGCAAAA CGCCGCCTCT TTT GGAGGCGGCG TGTTTTGTTTGAGCG TERM 3620 4993664 - 4993677 + H 81 -4.5 -5.06816 | GTCATCTTGCGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT TERM 3621 4995261 - 4995208 - H 93 -18.3 -3.28791 | overlap 4995215 4995221 ACCTTCTCTTGATAA CCGGAAATCCAAACCCTCACGTCTC TCTC GAAACGCAAGGCCTTGGAGTTCCGG CTATCGAAGGTGGGT TERM 3622 4995254 - 4995215 - H 76 -10.8 -3.69354 | overlap 4995208 4995221 CTTGATAACCGGAAA TCCAAACCCTCACGTCTC TCTC GAAACGCAAGGCCTTGGA GTTCCGGCTATCGAA TERM 3623 4995730 - 4995697 - H 74 -5.9 -4.40804 | gap 1, overlap 4995698 4995699 CACGATGTCAGAAAA CCCGCCAGGCTGCGCA TTG CGCAAAGCC-GGCGAA TACAAGTTGCGGACG TERM 3624 4998418 - 4998431 + H 71 -9.5 -3.75153 | opp_overlap 4998416 4998418 GGAGCCCGCAGAACA GCGGC AGTT GCCGC TTTCGATTGACGCAA RPA4431 4998672 - 5000702 + | peptidase M23B TERM 3625 5001135 - 5001106 - g 75 -15.7 -2.78816 | opp_overlap 5001095, overlap 5001070 GCATGGCCGACGACA TCGCCATCGCGCC GGAC GGCACGATGGCGT GGACCGCCTTCCTCA RPA4432 5000844 - 5002478 + | NHL repeat-containing protein clpB 5005395 - 5002756 - | endopeptidase Clp: ATP-binding subunit B, clpB TERM 3626 5005780 - 5005759 - g 80 -9.4 -4.18018 | GTTCGCGATCGAAAA CGGGCCGA TCGGAT TCGACCCG GCCAATCCCCGCTAC RPA4434 5005622 - 5006410 + | MOSC domain-containing protein RPA4435 5007360 - 5006617 - | hypothetical protein TERM 3627 5007606 - 5007617 + r 82 -3.6 -5.24129 | TACGTAGTCGGCGGC CTGC AGCG GCGG TTTTTTCTGCGCGCG RPA4436 5008277 - 5007582 - | methionine biosynthesis MetW metX 5009482 - 5008280 - | homoserine O-acetyltransferase TERM 3628 5009584 - 5009558 - H 100 -14.5 -5.45652 | gap 1, opp_overlap 5009577 5009578 AGGGCGAATAAAAAA CCCGGCCTGAAC ATTG GTTC-GGCCGGG ATCGGAACTGTCCCC aro 5009734 - 5010681 + | hypothetical protein TERM 3629 5011692 - 5011656 - g 73 -14.3 -3.21099 | opp_overlap 5011665 CTTCCCGACCACCAA GGGCAAGACCGCGGCGG AAG CCGACGCGTTCCTGACC CAGCGTGGCCTGGTG TERM 3630 5011832 - 5011794 - g 75 -9 -4.07568 | opp_overlap 5011794 5011795 5011795, overlap 5011795 5011823 GCTGGTGCTGGAAAA CTTGCGC-GAGTTCATGG GACAG CCATGAACTCTGCGCC-G ATGTTTCGCAAAGTC hisC 5010724 - 5011821 + | histidinol-phosphate aminotransferase tyrC 5011818 - 5012759 + | cyclohexadienyl dehydrogenase corA 5014059 - 5013079 - | Mg2+ transporter RPA4442 5014406 - 5015089 + | ErfK/YbiS/YcfS/YnhG TERM 3631 5015125 - 5015142 + F 100 -14.1 -5.7946 | opp_overlap 5015125 CCAGAGTTTGAAAAA GCGCCGG TTCG CCGGCGC TTTTTTTATTGGGCG TERM 3632 5015142 - 5015125 - f 100 -14.1 -4.61231 | opp_overlap 5015125 CCAGAGTTTGAAAAA GCGCCGG TTCG CCGGCGC TTTTTTTATTGGGCG TERM 3633 5017135 - 5017123 - g 72 -6.9 -4.2558 | overlap 5017125 GACCTTCGACGAAAA CACCG CGG CGGCG ATGTGCTACACCTCG RPA4443 5016593 - 5018221 + | putative acyl-CoA synthetase RPA4444 5019052 - 5019897 + | hypothetical protein RPA4445 5020276 - 5019977 - | hypothetical protein RPA4446 5020798 - 5020355 - | hypothetical protein RPA4447 5021214 - 5020795 - | hypothetical protein RPA4448 5021945 - 5021211 - | RNA polymerase sigma factor TERM 3634 5022652 - 5022627 - H 80 -14.7 -3.23492 | overlap 5022625 GACGACAGAGCAAGA CACAGGGCGCG ACAA CGCGGCCTGTG AGTACCCATCGGAAA TERM 3635 5022933 - 5022917 - g 72 -15.1 -2.79209 | overlap 5022914 5022912 CAAGGACGAATACGA CGCCGCG CAG CGCGGCG AGATCAGCACCGACC TERM 3636 5023585 - 5023554 - g 74 -12.2 -3.61902 | gap 1 CGGCAGGAGATAGAA GCGCGCGC-CGAGGC CGA GCGCCGGGCGCACGC CAACCAAGTCGCCGA RPA4449 5022729 - 5024420 + | pmethyl-accepting chemotaxis receptor/sensory transducer TERM 3637 5024442 - 5024467 + F 100 -23.3 -3.84451 | CAGATCCCATTGTCG CGGCCGGCGCC CCCA GGCGCCGGCCG TTTGCATTTCAGGGC TERM 3638 5024745 - 5024797 + G 75 -13.5 -3.35679 | gap 3, overlap 5024744 CTGGACCAGCTGCTC GC-CTGCGGCGGCGACGCGCGGATCG ACCT CGATCC-CGCGAC-TCGCCGCAACGC TTATGGCTGCAGCCC RPA4450 5024628 - 5026223 + | hypothetical protein RPA4451 5026213 - 5027448 + | hypothetical protein RPA4452 5027445 - 5028905 + | pyridoxal-dependent decarboxylase TERM 3639 5029151 - 5029118 - T 71 -12.5 -2.96984 | gap 1, opp_overlap 5029118 GAAAGGCAGTAGAGA TTCCGGATTCGCTCAC TGC GTGAGCGC-CCCGGAA TGACTTCGGAAAAGG RPA4453 5030011 - 5029184 - | hypothetical protein RPA4454 5030606 - 5030013 - | 5-formyltetrahydrofolate cyclo-ligase TERM 3640 5030781 - 5030758 - H 75 -14.6 -2.78596 | TAGGTGGGCACCATA TGACCGGGTC CACG GACCCGGCCA GGGACAGTTCCCGAA RPA4455 5030895 - 5031479 + | hypothetical protein RPA4456 5031753 - 5032292 + | hypothetical protein TERM 3641 5032321 - 5032368 + T 75 -14.2 -2.75992 | gap 1, opp_overlap 5032330 5032334, overlap 5032319 5032334 TAGTTCGACGTCATT GCGAGCGAAGCAATCCAGCATCT CGC ACGCGCTGGATTGCTCCGC-CGC TGATATTACATGCCG RPA4457 5032763 - 5032374 - | putative sulfide dehydrogenase RPA4458 5033263 - 5032787 - | isoprenylcysteine carboxyl methyltransferase dhsU2 5034580 - 5033288 - | putative flavocytochrome C sulfide dehydrogenase, flavoprotein subunit TERM 3642 5033719 - 5033667 - G 85 -13.3 -4.05033 | gap 1 TCCACCGGACAGAAA CCGCTG-GCATCGGCAAGCCCGGC GTCGCG GCCGAGCCTGCCGGCGATCTGCGG CGGGATGACGTTGAC dhsU1 5035885 - 5034620 - | putative flavocytochrome C sulfide dehydrogenase, flavoprotein subunit RPA4461 5036335 - 5035913 - | cytochrome subunit of sulfide dehydrogenase RPA4462 5037511 - 5036372 - | Lipocalin-related protein and Bos/Can/Equ allergen RPA4463 5038451 - 5037696 - | cytochrome TERM 3643 5038280 - 5038325 + g 83 -13.8 -3.81027 | gap 1, overlap 5038281 5038291 GGCCCAGACCGAGCT TCACCGGCGC-GGCGGCCGCG GCCGG CACGGCAGCCTGCGCCGGCGC TTTCGCTTCCTTCAC TERM 3644 5038281 - 5038324 + g 82 -17.3 -2.88134 | gap 1, overlap 5038280 5038291 GCCCAGACCGAGCTT CACCGGCGC-GGCGGCCGCG GCCGG CACGGCAGCCTGCGCCGGCG CTTTCGCTTCCTTCA soxC 5039730 - 5038435 - | sulfite dehydrogenase soxB 5041497 - 5039800 - | sulfur/thiosulfate oxidation protein SoxB TERM 3645 5041577 - 5041599 + r 91 -20.6 -2.62263 | overlap 5041558 CCGCAGATCTTCGTT CCGGGAGCCG ATC CGGCTCCCGG TGGTCTACGGCGGAT soxZ2 5041969 - 5041640 - | putative sulfur oxidation protein soxZ soxY2 5042472 - 5042008 - | sulfur oxidation protein SoxY RPA4468 5042658 - 5043479 + | hypothetical protein RPA4469 5043493 - 5044236 + | hypothetical protein TERM 3646 5044291 - 5044268 - f 84 -16 -3.06501 | gap 1 GACATTGCGAGCCAA CGGGTCGGCGC AAC GCGCCG-CCCG ATGACAGGCTCCGCG TERM 3647 5044673 - 5044636 - g 70 -11.4 -3.48276 | gap 3, opp_overlap 5044640 5044642 CCGGGGCCCACACAA CGAGCACCGCGA-CC-GGC AAG GCCTGGACCGCGGTG-TCG TTCAAGACCGGCACC TERM 3648 5044750 - 5044713 - g 74 -9.8 -3.84648 | overlap 5044708 GCCAACATGACCAAA CCGGGCATGCCGCA ATCCGGCCTG CGCGACCTGCCCGG CGTCGTCGTGCTCGG RPA4470 5044401 - 5044898 + | hypothetical protein TERM 3649 5044982 - 5045028 + T 76 -13.8 -3.21747 | gap 2, opp_overlap 5045027 GGCAAGCTGTGCTGG CGGCAGATTCCGGGTCGCTCGC TGAGC GCGAGCGCCCCGGAAT--GACG TTGATAGTAAGATGC RPA4471 5045640 - 5045047 - | hypothetical protein TERM 3650 5045377 - 5045392 + g 73 -4 -4.62069 | gap 1, overlap 5045377 5045378 CGCCGGATCGCGCAT G-TGCAC GTC GTGCAGC TTTTTGCAGTACGGG RPA4472 5046412 - 5045669 - | putative c-type cytochrome biogenesis protein RPA4473 5046561 - 5046857 + | hypothetical protein RPA4474 5046896 - 5047270 + | ArsR family transcriptional regulator TERM 3651 5047393 - 5047408 + GT 76 -8.2 -4.2461 | overlap 5047394 TGGCCGGCCTGTGCG TCGGCG TCAC CGCCGG TTTCTTCGTGCGGCT TERM 3652 5048240 - 5048218 - gT 77 -11.2 -3.80841 | ACGACGACCATGAAA TGCGCCGTCA CGT CGCCGGCGCA GCGCTGATGGGGTTC RPA4476 5048976 - 5048464 - | hypothetical protein RPA4475 5047347 - 5048549 + | hypothetical protein TERM 3653 5049038 - 5049079 + Tr 77 -13.7 -3.28924 | gap 1, opp_overlap 5049025 5049030, overlap 5049040 5049042 5049061 GAGATGACTTGGGTC GTCATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATCTC TTGTCAAGCAACCTC TERM 3654 5049040 - 5049077 + Tr 80 -14.9 -3.21276 | gap 1, opp_overlap 5049030, overlap 5049038 5049042 5049061 GATGACTTGGGTCGT CATTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAATC TCTTGTCAAGCAACC TERM 3655 5049042 - 5049075 + Tr 89 -17.5 -3.17146 | gap 1, opp_overlap 5049030, overlap 5049040 5049038 5049061 TGACTTGGGTCGTCA TTCCGGG-GCGCGAGC GCA GCTCGCGAACCCGGAA TCTCTTGTCAAGCAA TERM 3656 5049061 - 5049113 + Tr 95 -17.8 -3.53012 | opp_overlap 5049030 5049091 5049092, overlap 5049042 5049040 5049038 GGGGCGCGAGCGCAG CTCGCGAACCCGGAATCTCTTG TCAAGCAAC CTCGAGATTCCGGGTTCGCGCG TTTCACGCGCGCCCC RPA4477 5050203 - 5049148 - | hypothetical protein TERM 3657 5050459 - 5050408 - R 78 -12 -3.72576 | gap 1, opp_overlap 5050435, overlap 5050409 GGCGTCTCGATCAAA GCGTCCCGACGGCCGGCGCCGCCAC GAT GCGCCAGCGCAGGCCG-CGGCCGGC GAATTCATCGCCGAT TERM 3658 5050457 - 5050409 - R 70 -13 -2.83403 | gap 2, opp_overlap 5050435, overlap 5050408 GCGTCTCGATCAAAG CGTCCCGACGGCCGGCGCCGCCAC GAT GCGCCAGCGCAGGCCG-CG-GCCG GCGAATTCATCGCCG RPA4478 5050708 - 5050403 - | hypothetical protein czcA3 5053800 - 5050705 - | putative heavy metal cation efflux system protein TERM 3659 5052717 - 5052680 - G 71 -9.2 -3.80573 | gap 2, overlap 5052681 CGCATCAGCACGAAA GTGGCGAGCGCCGACAGC GGCA GC-GTCAACGC-CACCAC AAGCGCGGCGCGCCA czcB 5054907 - 5053801 - | RND divalent metal cation efflux membrane fusion protein CzcB precursor RPA4481 5056423 - 5055101 - | methyl-accepting chemotaxis sensory transducer TERM 3660 5055553 - 5055527 - GR 75 -12.3 -3.62096 | opp_overlap 5055510 GGCGACCACCGCAAA GC-CGCGACCGGC CTC GCCGG-CGCGTGC CGCTTCGATCGTGGC RPA4482 5056922 - 5056386 - | methyl-accepting chemotaxis sensory transducer TERM 3661 5057056 - 5057086 + r 71 -12.5 -3.05463 | TCAATGGAACCCGGT GCATGGCCGACGA TCAGT TCGCCGGCCACGC TTAGCTCACGCGGCT RPA4483 5058342 - 5057092 - | methyl-accepting chemotaxis sensory transducer RPA4484 5058910 - 5058377 - | methyl-accepting chemotaxis sensory transducer TERM 3662 5058807 - 5058832 + g 81 -8.9 -4.56961 | opp_overlap 5058806 5058808, overlap 5058808 GCGACATCGCAGAAC AGGCGGTTGGC GTAA GTCAGCCGCCC TTTTGTGTCGGTCTT TERM 3663 5058808 - 5058831 + g 71 -12.4 -3.33092 | opp_overlap 5058806 5058808, overlap 5058807 CGACATCGCAGAACA GGCGGTTGGC GTAA GTCAGCCGCC CTTTTGTGTCGGTCT mutY 5060136 - 5059087 - | A/G-specific adenine glycosylase TERM 3664 5060282 - 5060326 + G 72 -11.5 -3.53012 | gap 1 GCCAAGCCACTGTCC GGCCTGTTGGGCGCAACGCT GTCCGA AGCGTT-CGCCAAGCAGGGC TTTGCGGCGCGCGAA RPA4486 5060243 - 5060722 + | hypothetical protein RPA4487 5060865 - 5061539 + | twin-arginine translocation pathway signal TERM 3665 5062113 - 5062138 + F 83 -16.1 -2.89742 | opp_overlap 5062111 5062110 AGCTTCGCCAAACCC TCGCCGGCCGG TCTC CCGGCCGACGA TCTGTCCCGCTTCCA RPA4488 5062553 - 5062840 + | excinuclease ABC subunit C TERM 3666 5064963 - 5064934 - g 100 -13.5 -4.73388 | overlap 5064936 AAGGGCTATGAAAAA GCGATCGGCGCCG TGCT CGGCGACGATCTC GACGCGCCGGTCGAT TERM 3667 5064961 - 5064936 - g 71 -14.7 -2.65504 | overlap 5064934 GGGCTATGAAAAAGC GATCGGCGCCG TGCT CGGCGACGATC TCGACGCGCCGGTCG RPA4489 5063290 - 5066823 + | chromosome segregation protein SMC TERM 3668 5066840 - 5066814 - f 74 -12.2 -3.4072 | TATTCTCGATCAGAA CGTGGCGTGAGC GGC GCTCGCGCCAAG GCAGTGACGCGGCGC RPA4490 5067098 - 5068078 + | hypothetical protein RPA4491 5071404 - 5068489 - | hypothetical protein TERM 3669 5069118 - 5069064 - G 82 -17.1 -3.02829 | gap 2 CAGAGGTGCCGAACA GGCCGGCATCGGCCATCGCCAGCGCCG TGC CGGCGCCGCCGA-GATCGCTGCC-GCC GCCGAACCTGGTCTG TERM 3670 5071437 - 5071427 - H 75 -3.2 -4.87803 | CATCTGCAAAGAAAA CACG GAT CATG AGTTGCAGTTGATGC TERM 3671 5071523 - 5071541 + H 81 -13.8 -3.66999 | opp_overlap 5071522 5071518 CGACGACCAACGGAT GCCGCGCG GGG TGCGCGGC TTTGGCTGCGTGCGT apt 5071736 - 5072281 + | adenine phosphoribosyltransferase RPA4493 5073155 - 5072490 - | hypothetical protein TERM 3672 5073155 - 5073196 + r 89 -17.4 -3.14931 | opp_overlap 5073158 CCGGAGTGCGCGACA TCAGGCTATATCGGTCGG GGGAGG CCGTCCGATATAGCCGGA TTCCTCAGCGATGCG TERM 3673 5073193 - 5073158 - R 86 -17.7 -2.62396 | opp_overlap 5073155 GAGTGCGCGACATCA GGCTATATCGGTCGG GGGAGG CCGTCCGATATAGCC GGATTCCTCAGCGAT TERM 3674 5073222 - 5073256 + r 71 -8.5 -3.8917 | gap 2, overlap 5073222 ATGCGAACTATTTCT C-GCC-CGGCTCGTCGG TCA CCGGTGTGCCGCGGCCG TTCTTGTCCTTGCCG RPA4494 5073987 - 5073214 - | hypothetical protein htpX 5075364 - 5074168 - | peptidase M48, Ste24p TERM 3675 5074212 - 5074269 + g 100 -21.9 -3.60098 | gap 1 GCAGCGACGGCTTGG GCGCCGG-TGCCGGCGCGTCGCTCCACG GTC CGTGCGGCGGCGCGGCGGAGGCTGGCGC TTTACCATCGACCGT TERM 3676 5075064 - 5075113 + g 73 -12.2 -3.40403 | gap 1 GATTGTAGAGCCGCG GCTGTTCGGCCCGCGTCACCG CATGGCCGC CGGTGACG-GCGTCGATCAGC TTCTGGTGGAAGAAA TERM 3677 5075401 - 5075434 + r 87 -17.5 -2.94099 | gap 1 GGCCCATCCACGTCA TTCCGGG-ATGCGCCC TTG GGGCGCAGGCCCGGAA TCTATAATCCCCGCG trpG 5078230 - 5076071 - | anthranilate synthase TERM 3678 5078299 - 5078282 - R 81 -9.8 -4.16785 | overlap 5078261 ACAGGACAAACGAAA GCCGCC TCGCGT GGCGGC CTCAGGACGATCGGA RPA4499 5079113 - 5078463 - | hypothetical protein RPA4500 5079891 - 5080097 + | hypothetical protein RPA4501 5080352 - 5080134 - | PhnA protein TERM 3679 5080464 - 5080437 - R 100 -20.6 -4.56914 | opp_overlap 5080435 GCATCCAAATGAAAA GCGCGAGGCGGA TCGC TCCGCCCCGCGC CGTGTCTTGAAGCCA TERM 3680 5080516 - 5080484 - R 75 -4 -4.74103 | overlap 5080486 TCTTGAAGCCAAAAA GCTCAGAACCGGTA GGTGA TGCCGGTGCCGATC AGCCACGGATCGAGA RPA4502 5081175 - 5080486 - | putative outer membrane protein RPA4503 5081668 - 5081408 - | hypothetical protein TERM 3681 5081693 - 5081726 + r 72 -13.9 -2.78384 | gap 1, opp_overlap 5081686 5081715 5081720 CCAGAGCACGAGTCA TTCCGGG-GCGCTCGC GAA GCGAGTGAACCCGGAA TCTCGTAGCGACAAC TERM 3682 5081760 - 5081715 - R 83 -16.9 -2.52464 | opp_overlap 5081693 5081738, overlap 5081686 5081720 5081741 5081744 GCGCTCGCGAAGCGA GTGAACCCGGAATCTCGTAGC GACA ACGACGGGATTCCGGGTTCGC GCGTTGCGCGCGCGC TERM 3683 5081755 - 5081720 - R 75 -14 -3.09933 | opp_overlap 5081693 5081738, overlap 5081686 5081715 5081741 5081744 CGCGAAGCGAGTGAA CCCGGAATCTCGTAGC GACA ACGACGGGATTCCGGG TTCGCGCGTTGCGCG TERM 3684 5081790 - 5081741 - R 74 -12.8 -3.35798 | gap 1, opp_overlap 5081738 5081774, overlap 5081720 5081715 5081744 ATCTCGTAGCGACAA CGACGGGATTCCGGGTTCGCGCG TTGCG CGCGCGC-CCCGGAATGACGTTG CGAGGCTTTGTCTAA TERM 3685 5081787 - 5081744 - R 70 -13.1 -2.8474 | gap 1, opp_overlap 5081738 5081774, overlap 5081720 5081715 5081741 TCGTAGCGACAACGA CGGGATTCCGGGTTCGCGCG TTGCG CGCGCGC-CCCGGAATGACG TTGCGAGGCTTTGTC RPA4504 5083757 - 5081847 - | AMP-dependent synthetase and ligase TERM 3686 5083812 - 5083832 + r 79 -8.2 -4.2704 | CATGTCCGGCTTTTA GGCGCGGT ACGCA ACCCCGCC TTTGTTCCTAATCAA RPA4505 5084684 - 5083938 - | TPR repeat-containing protein TERM 3687 5084851 - 5084833 - R 74 -12.4 -3.48924 | opp_overlap 5084833, overlap 5084837 TGACGTTGGAGAGAA GGAAGCGC TTC GCGCCTCC TTATCATGAGCGTCG RPA4506 5085673 - 5084870 - | putative short-chain alcohol dehydrogenase RPA4507 5087557 - 5085773 - | Elongator protein 3/MiaB/NifB TERM 3688 5087219 - 5087180 - G 70 -9.8 -3.63805 | ACCGGAGACGTGAAA GCCGCCCATCACCACCGG CACG CCGCTGGCGCGGAACGGC CGGGCGATATCGAGC RPA4508 5088992 - 5088621 - | hypothetical protein TERM 3689 5088976 - 5088944 - G 73 -14.1 -3.17723 | CCAGCGTGAAGGCAA CGACCGCCAGCGT CTTCACC ACGCCGGCGGACG CCACGCACAGGCTCA RPA4509 5091109 - 5088989 - | TRAP dicarboxylate family transporter DctM subunit RPA4510 5092203 - 5091256 - | TRAP transporter solute receptor TAXI family protein TERM 3690 5092306 - 5092274 - H 70 -10.6 -3.57561 | overlap 5092243 GGTCAACCCGTCAAA TCGGCGGTCCG-GGCC GAG GGCCGCGGAAC-CCGA AGGCGGCGGCGCGAA RPA4511 5092359 - 5093624 + | major facilitator transporter RPA4512 5093953 - 5093642 - | response regulator receiver RPA4513 5095012 - 5094008 - | putative signal transduction histidine kinase TERM 3691 5094909 - 5094884 - G 71 -3.2 -4.58283 | gap 1, overlap 5094885 GAAGGTTTCGAAAAA CGACCG-GCTG GCATT CTGCACGGTCA GGCTGGCGTCCAGTA TERM 3692 5095340 - 5095365 + G 74 -10.3 -3.81951 | overlap 5095341 TTCACGCTCGGCGTC GCGTCCGGTGC TCCG GCTCCGGACGG TTTCGTGCTGTGGAC TERM 3693 5095341 - 5095364 + G 71 -13.8 -2.88849 | overlap 5095340 TCACGCTCGGCGTCG CGTCCGGTGC TCCG GCTCCGGACG GTTTCGTGCTGTGGA TERM 3694 5096532 - 5096558 + G 73 -14.5 -2.80816 | overlap 5096521 CCAACTCGCCGTGCG TCGGCGTCGAG TTTCT CTCGACGTCGA TCTCATCCGTCGGCG RPA4514 5095094 - 5096794 + | alkaline phosphatase D RPA4515 5096930 - 5097937 + | hypothetical protein vieA 5098179 - 5099393 + | putative cylclic diguanylate phosphodiesterase (EAL) RPA4517 5099970 - 5099410 - | hypothetical protein RPA4518 5100110 - 5100445 + | hypothetical protein RPA4519 5101675 - 5100464 - | hypothetical protein RPA4520 5102437 - 5101811 - | NUDIX hydrolase TERM 3695 5102398 - 5102382 - G 75 -9.3 -4.07568 | TCGTGGCGCGGAAAA GCCGCGC AGC GTGCGGC GATCAGGGCTCGGGT RPA4521 5102565 - 5102942 + | thioesterase superfamily protein cbbY 5103704 - 5102958 - | haloacid dehalogenase-like hydrolase RPA4523 5104369 - 5103980 - | response regulator receiver (CheY-like protein) TERM 3696 5104437 - 5104421 - R 72 -2.1 -4.68908 | opp_overlap 5104428, overlap 5104423 GCGACGCAAAACAAA GACCGGC TAT GACGGTG TCAGATTGCTGCAGT RPA4524 5106185 - 5104629 - | sensor histidine kinase TERM 3697 5106472 - 5106486 + H 75 -3.6 -4.84274 | overlap 5106473 ATGCCTGATCGAAAT TGAAAT ATT ATTTCG TTTTTGCTGTGCTTA RPA4525 5106564 - 5106995 + | hypothetical protein TERM 3698 5107016 - 5107051 + F 100 -20.6 -3.61715 | opp_overlap 5107017 5107020 5107023, overlap 5107017 5107023 5107044 5107050 CGTAGATAGTAGACG ACAAGAACCGAAGCGG TGGA CCGCTTCGGTTCTTGC TTGTTAAGCAAGCTA TERM 3699 5107050 - 5107017 - f 100 -24.1 -2.69406 | opp_overlap 5107016 5107017 5107023 5107044, overlap 5107020 5107023 GTAGATAGTAGACGA CAAGAACCGAAGCGG TGGA CCGCTTCGGTTCTTG CTTGTTAAGCAAGCT TERM 3700 5107017 - 5107050 + F 100 -24.1 -2.76815 | opp_overlap 5107017 5107020 5107023, overlap 5107016 5107023 5107044 GTAGATAGTAGACGA CAAGAACCGAAGCGG TGGA CCGCTTCGGTTCTTG CTTGTTAAGCAAGCT TERM 3701 5107047 - 5107020 - f 100 -20 -3.49114 | opp_overlap 5107017 5107016 5107023 5107044, overlap 5107017 5107023 GATAGTAGACGACAA GAACCGAAGCGG TGGA CCGCTTCGGTTC TTGCTTGTTAAGCAA TERM 3702 5107044 - 5107023 - f 91 -15.9 -3.87505 | opp_overlap 5107017 5107016 5107023, overlap 5107020 5107017 AGTAGACGACAAGAA CCGAAGCGG TGGA CCGCTTCGG TTCTTGCTTGTTAAG TERM 3703 5107023 - 5107044 + F 91 -15.9 -3.89957 | opp_overlap 5107023 5107020 5107017, overlap 5107017 5107016 AGTAGACGACAAGAA CCGAAGCGG TGGA CCGCTTCGG TTCTTGCTTGTTAAG RPA4526 5107465 - 5107899 + | hypothetical protein maf 5109043 - 5108324 - | Maf-like protein RPA4528 5110210 - 5109044 - | hypothetical protein TERM 3704 5110453 - 5110407 - R 71 -13.7 -2.57132 | gap 1, overlap 5110369 5110406 GCCGTGCTCCACAAG CTCGGGATTCCGGGTTCGCGCC TGGC GGCGCGC-CCCGGAATGACGAA TGTGGAGGCCAGTAC arsC4 5111263 - 5110793 - | protein tyrosine phosphatase RPA4530 5111810 - 5111319 - | hypothetical protein hisD 5113102 - 5111807 - | histidinol dehydrogenase TERM 3705 5112859 - 5112815 - G 86 -9.2 -4.65895 | gap 1, overlap 5112817 CCGGCGATGGAAAAA TTCGATGCGGTCG-CGCGCCA GCTT CAGCGCGTCGACCGTCTCGGA ATCGCACGCCTTCAC RPA4532 5113681 - 5113226 - | hypothetical protein murA 5114990 - 5113701 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase RPA4534 5115622 - 5115149 - | hypothetical protein RPA4535 5115658 - 5115945 + | hypothetical protein TERM 3706 5115970 - 5115993 + T 100 -16 -4.86731 | opp_overlap 5115972 GACCTTATCTCGACA GAGCCCTGGC CTCG GCCGGGGCTC TTTTGTTTCGGAGAC RPA4536 5117702 - 5116011 - | cyclic nucleotide regulated pyridine nucleotide-disulphide oxidoreductase TERM 3707 5117779 - 5117793 + H 71 -12.8 -3.07344 | TGGCGGCATCATGAC CGCCGG TAT CCGGCG TGTCTTGCACGATCG TERM 3708 5118148 - 5118185 + G 95 -16.9 -3.88015 | overlap 5118150 GTCGTGCTGCATTCC CCGGTGGTGCGGTCGCC GATC GCCGGCCGCACCGCCTG TTTGCTGGTTCTGTG TERM 3709 5118150 - 5118183 + G 90 -18.1 -3.51793 | overlap 5118148 CGTGCTGCATTCCCC GGTGGTGCGGTCGCC GATC GCCGGCCGCACCGCC TGTTTGCTGGTTCTG RPA4537 5118019 - 5118465 + | hypothetical protein RPA4538 5119751 - 5118975 - | hypothetical protein RPA4539 5120303 - 5119758 - | hypothetical protein TERM 3710 5119822 - 5119835 + g 70 -3.7 -4.57073 | overlap 5119812 5119823 GCCAGCATCGCCCGA AGCGG GGCG CCGCG TTTTTCAACGCGATC RPA4540 5120345 - 5120974 + | hypothetical protein TERM 3711 5120995 - 5121005 + T 74 -2.4 -4.87803 | CTGCTGAAAGTTCGG CCGC GGC GCGA TTTTGTTTGAGCGTC rlgA 5121649 - 5121110 - | DNA invertase gene rlgA TERM 3712 5121752 - 5121711 - H 100 -13.8 -4.49756 | gap 1 CCCGAAATAGCAAAA GGCGGTGCTAATGAGACAG ACAAA CTGTCTCGCC-GCACCGCC TCGGCCAGGTACACT RPA4542 5122393 - 5122692 + | hypothetical protein RPA4543 5123184 - 5122780 - | hypothetical protein RPA4544 5123774 - 5123181 - | hypothetical protein RPA4545 5124109 - 5123771 - | hypothetical protein TERM 3713 5123892 - 5123928 + g 89 -10.9 -4.18506 | opp_overlap 5123884, overlap 5123851 5123889 5123916 5123917 AAAGGAACTGGCGCA CTGGCGCAGATGAGTTG CGC CGGTTGATTTGCGCCAG TTGTTTTCGAACTGG TERM 3714 5123981 - 5124030 + g 75 -13 -3.35813 | gap 1, overlap 5123982 5124026 5124029 TTGTGGCCGTTTCTT GCGCGCCAGTTCGTCCAAGAATG GCATA CGTTTTTGGACG-ACTGGCACGG TTAGTTCGGGTGCGC TERM 3715 5123982 - 5124029 + g 77 -16.5 -2.61274 | gap 1, overlap 5123981 5124026 TGTGGCCGTTTCTTG CGCGCCAGTTCGTCCAAGAATG GCATA CGTTTTTGGACG-ACTGGCACG GTTAGTTCGGGTGCG TERM 3716 5124076 - 5124060 - G 75 -4.4 -4.67048 | gap 1, opp_overlap 5124029 5124026 CCAGTTGAAAACAAA CTGGCGC ACTG GCGC-AG ATCCTGTAATTTCAA RPA4546 5126418 - 5124106 - | hypothetical protein TERM 3717 5124476 - 5124455 - G 72 -11.5 -3.55444 | overlap 5124456 5124468 5124471 GCCGCAGCGGCTAAA TCGGCGAGG ACAA CCACGCCGA CCGTGTCGCCGGACA TERM 3718 5124514 - 5124456 - G 72 -14.5 -2.73124 | gap 1, overlap 5124455 5124468 5124471 5124495 CCGCAGCGGCTAAAT CGGCGAGGACAACCACGCCGACCGTGTC GCCG GACATGAGC-GCGTCGACGCCCTCGCCG GCGCCGTTGCCGAGC TERM 3719 5125065 - 5125089 + g 72 -13.5 -3.14344 | overlap 5125069 CGCTGTAGTGGTGCA TTGCCGCGGCG ACG CGCCGCTGCAG TTCGTCGACCGGGTC RPA4547 5127233 - 5126565 - | hypothetical protein RPA4548 5127577 - 5127230 - | hypothetical protein TERM 3720 5127263 - 5127277 + g 70 -8.5 -3.9122 | CGAGACGGCCCGTTT GCGCG CCGCC CGCGC TTCTTTGCCGCGATC TERM 3721 5127852 - 5127893 + r 72 -8 -4.13183 | gap 3, opp_overlap 5127848 5127840, overlap 5127867 CAACGCAATCAGGCT CGTCGCGTCGACCAGCGCGTC TCC GGCTCGC-GG-CGA-GCGGCG TTTCGTTTACATTTT RPA4549 5129380 - 5127998 - | Phage integrase RPA4550 5129811 - 5130200 + | hypothetical protein TERM 3722 5130723 - 5130713 - g 79 -6.8 -4.57569 | overlap 5130716 5130717 CGAGTTTGTGAAAAA GCAG CGG CTGC TCGAGGACGAGAAAC TERM 3723 5131269 - 5131233 - g 72 -13.8 -3.05384 | GTCTGGGTCACCGAA GCGCGCTGCGCGATT-CC GGT GGCAATCGCGCTGCG-GC AGTCGCTGATCGAGC RPA4551 5130324 - 5131613 + | hypothetical protein RPA4552 5132891 - 5131650 - | 4-hydroxybutyrate-CoA transferase/hydrolase TERM 3724 5132730 - 5132697 - G 86 -18.3 -3.16564 | gap 1, overlap 5132682 5132681 5132724 5132725 GCCGTAGCTGACGAA CGACACGTTCGGCGGC GCA GCCGC-AAACGTGTCG GAGAACACCGGCCCG RPA4553 5134084 - 5132918 - | putative acyl-CoA dehydrogenase dctM2 5135427 - 5134138 - | TRAP dicarboxylate family transporter DctM subunit TERM 3725 5134823 - 5134790 - G 77 -7.3 -4.49981 | gap 1, overlap 5134782 5134792 CACAGCAGCACAAAA CGC-TCGCGCCACGGC ACC GACGCGACCCGAGGCG CACGTGACGGATCGA RPA4555 5135990 - 5135439 - | TRAP dicarboxylate family transporter DctQ subunit TERM 3726 5135896 - 5135862 - G 83 -15.9 -3.51825 | gap 2, overlap 5135889 GTAGGTGAAGGAGAA CGGACG-GTTCA-GCGC GTA GCGCATGAACACGTCCG CCACCACCAGCACCA TERM 3727 5136042 - 5136080 + r 88 -16 -3.33696 | opp_overlap 5136022 5136050 CTTGCTCGCACCAGC GGCAAGCAGGCTCTGGAA CTC TTCGAGCGCCTGCGTGCC TTGCTTGCCGCGGGA RPA4556 5137049 - 5136024 - | TRAP dicarboxylate family transporter DctP subunit TERM 3728 5137091 - 5137104 + H 71 -9.5 -3.72893 | overlap 5137068 5137067 AGCAGCGGGCGGCAG GCGGC TTGT GCCGC TTTGATGGAGGGATC RPA4557 5137253 - 5138449 + | hypothetical protein RPA4558 5138494 - 5138946 + | MaoC dehydratase TERM 3729 5139014 - 5138996 - g 70 -11.6 -3.39668 | GCGCAAATTCGAGAA GGCGTCGC AAG GCGGCGCC GACGCGCTGATCATC RPA4559 5138946 - 5139794 + | putative citrate lyase beta chain RPA4560 5139835 - 5140566 + | IclR family transcriptional regulator RPA4561 5141761 - 5140697 - | guanosine 5'-monophosphate oxidoreductase apbA/panE 5141828 - 5142733 + | putative 2-dehydropantoate 2-reductase exoI2 5143484 - 5142735 - | nuclease RPA4564 5143612 - 5144526 + | phenylacetic acid degradation-related protein RPA4565 5144704 - 5145906 + | putative diguanylate cyclase (GGDEF) ackA 5147103 - 5145907 - | putative acetate kinase pta 5148515 - 5147100 - | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase TERM 3730 5148472 - 5148498 + g 72 -6.7 -4.24948 | gap 2 AGACTGGCGGTGTCA CCG-ACC-TCGAT CTC ATCGAAGGTGCGG TTTTGGATCTGCTCC RPA4568 5149300 - 5148539 - | enoyl-(acyl carrier protein) reductase RPA4569 5150252 - 5149383 - | hypothetical protein TERM 3731 5150293 - 5150307 + H 71 -12.8 -3.09492 | opp_overlap 5150278 CGGGCTCCGGCCGGC CCGCCG CCC CGGCGG TCTTCCCGTTCAGGG TERM 3732 5150689 - 5150705 + G 81 -11.5 -3.96624 | opp_overlap 5150687 CGCGCCGGAGCAACG CGGCGCG GAT CGCGCTG TTTGTACTGCCACTG RPA4570 5150634 - 5152016 + | hypothetical protein TERM 3733 5152073 - 5152046 - T 100 -17 -3.72027 | opp_overlap 5152048, overlap 5152048 AGTCGCTACGAACAA GAGCCGCGCGGA GCGA TCCGCGCGGCTT TGTCGTTCAGAACGT TERM 3734 5152048 - 5152071 + T 100 -19.6 -4.05446 | opp_overlap 5152046 5152048 TCGCTACGAACAAGA GCCGCGCGGA GCGA TCCGCGCGGC TTTGTCGTTCAGAAC TERM 3735 5152071 - 5152048 - T 100 -19.6 -3.44284 | opp_overlap 5152048, overlap 5152046 TCGCTACGAACAAGA GCCGCGCGGA GCGA TCCGCGCGGC TTTGTCGTTCAGAAC RPA4571 5152499 - 5152095 - | hypothetical protein TERM 3736 5152702 - 5152669 - R 86 -15.4 -3.54741 | gap 1, opp_overlap 5152680, overlap 5152673 5152676 GATGACGCTCTCAAA CGAACAAGGGACGGC GCGAA GCCGTCCCTTGC-CG GAACTCACCGGATGG TERM 3737 5152699 - 5152673 - R 95 -18.1 -3.51411 | opp_overlap 5152680, overlap 5152669 5152676 ACGCTCTCAAACGAA CAAGGGACGGC GCGAA GCCGTCCCTTG CCGGAACTCACCGGA TERM 3738 5152696 - 5152676 - R 86 -14 -3.89354 | opp_overlap 5152680, overlap 5152673 5152669 CTCTCAAACGAACAA GGGACGGC GCGAA GCCGTCCC TTGCCGGAACTCACC htrA/degQ/degS 5154292 - 5152730 - | serine protease TERM 3739 5154085 - 5154104 + g 75 -9.2 -4.08216 | CCAGATCTCCGAACC CGGCGGGC GCCG GCTTGCCG TTTTCAGCCGCATAG RPA4573 5155035 - 5154547 - | hypothetical protein RPA4574 5155428 - 5155144 - | hypothetical protein TERM 3740 5156596 - 5156616 + G 88 -16.1 -3.72576 | opp_overlap 5156596 5156593 CCTCTCGATCAACCA GCGGCGTCG GCT CGGCGCCGC TTTCGTGCCAGAACA RPA4575 5155586 - 5157151 + | putative ATP-binding protein of sugar ABC transporter RPA4576 5157135 - 5158226 + | putative permease protein of sugar ABC transporter TERM 3741 5159077 - 5159112 + G 72 -13.2 -3.14132 | gap 1 TCGCGCGTCCGCCGG GGCGGGTCGGTGGCGCC GGC GGCGCT-CGGAACCGCC TTCGTGCCGGAGCGC RPA4577 5158213 - 5159130 + | putative permease protein of sugar ABC transporter TERM 3742 5160164 - 5160130 - g 70 -6.3 -4.18934 | gap 1, opp_overlap 5160162, overlap 5160110 5160131 GACGACGTGAAGAAA CTCGCCGCCGACACCG AGGC CGGCATCGCCGCCG-G CACCATCAAGCCGTT RPA4578 5159212 - 5160309 + | basic membrane lipoprotein RPA4579 5161548 - 5160505 - | PDZ/DHR/GLGF domain-containing protein RPA4580 5162597 - 5161590 - | hypothetical protein TERM 3743 5163327 - 5163364 + G 78 -10 -4.1043 | gap 2, opp_overlap 5163344, overlap 5163326 5163344 CCTATGTCGGGCGGG CGCG-CG-GCACGTTC AAAGATCC GAACGTGCTCGGCGCG TTTCTGATCTTTCCG RPA4581 5162843 - 5164102 + | hypothetical protein TERM 3744 5164998 - 5164978 - g 81 -16.1 -3.20435 | CGAAGTACGGATCAA GGGCCGCCG CGC CGGCGACCC TGCGGCGCTGATCGC galE2 5164133 - 5165116 + | UDP-galactose 4-epimerase TERM 3745 5165413 - 5165427 + G 72 -7.1 -4.29845 | CGGCGCAAGTCGGAC CGCAG GAAAG CTGCG TTTTGGATTCCGTTC TERM 3746 5165975 - 5165960 - g 70 -10.4 -3.73953 | ACGAGGCCGAGGAAA TCGCGG TGTG CCGCGA AATTGGCGCCCTGGC RPA4583 5165344 - 5166261 + | UDP-N-acetyl-D-mannosamine transferase RPA4584 5167413 - 5166277 - | endoglucanase RPA4585 5169585 - 5167429 - | lipopolysaccharide biosynthesis RPA4586 5169889 - 5171088 + | glycosyl transferase group 1 RPA4587 5171110 - 5172639 + | hypothetical protein RPA4588 5173022 - 5172657 - | hypothetical protein RPA4589 5173165 - 5174634 + | O-antigen export protein RPA4590 5175704 - 5174703 - | homoserine O-succinyltransferase metY 5177021 - 5175717 - | homocysteine synthase RPA4592 5177281 - 5179104 + | acyl-CoA synthetase RPA4593 5179104 - 5179988 + | aminotransferase TERM 3747 5179985 - 5180005 + T 78 -14.7 -3.01712 | GGAGTTCGCACACGG CTGAGCGGC GAT GCCGCTCGG TCTTCACGGGCCGAA RPA4594 5180893 - 5180009 - | hypothetical protein RPA4595 5181226 - 5182605 + | hypothetical protein fabG5 5182598 - 5183329 + | putative 3-oxoacyl-acyl carrier protein reductase RPA4597 5184492 - 5183551 - | hypothetical protein RPA4598 5185756 - 5184527 - | acyl-CoA dehydrogenase RPA4599 5186123 - 5186395 + | hypothetical protein RPA4600 5186469 - 5186924 + | hypothetical protein TERM 3748 5186996 - 5186962 - f 71 -8.4 -3.87869 | opp_overlap 5186967, overlap 5186967 GCAAGGCCGCACAAA TCAGACGGCGGATCGC GCG GCGGTCCGCCGTTTTC GTTCGCCAGCCCTAC TERM 3749 5186967 - 5186991 + F 100 -19.3 -4.4078 | opp_overlap 5186962 5186967 GCCGCACAAATCAGA CGGCGGATCGC GCG GCGGTCCGCCG TTTTCGTTCGCCAGC TERM 3750 5186991 - 5186967 - f 88 -17.1 -3.05997 | opp_overlap 5186967, overlap 5186962 GCCGCACAAATCAGA CGGCGGATCGC GCG GCGGTCCGCCG TTTTCGTTCGCCAGC RPA4601 5187101 - 5187688 + | hypothetical protein TERM 3751 5187851 - 5187820 - T 70 -7.8 -4.00532 | overlap 5187822 CTGCGAAAGATCAAA GACGTGGATGGCCC GGTC GAGCCGGCCACGAC AAGTGGAGAAGGGAT TERM 3752 5187915 - 5187948 + T 81 -15.4 -3.09516 | gap 1, opp_overlap 5187915 5187916, overlap 5187917 5187921 CCCTCGTCTTAGAAA CGC-CAATGCCCGGG ACAAG CCCGGGCATTGAGTG TTGCGTCATGAAGCA TERM 3753 5187948 - 5187915 - T 83 -13.2 -3.85698 | gap 1, opp_overlap 5187915 5187917 5187921, overlap 5187916 CCCTCGTCTTAGAAA CGC-CAATGCCCGGG ACAAG CCCGGGCATTGAGTG TTGCGTCATGAAGCA TERM 3754 5187946 - 5187916 - T 70 -13.3 -2.91276 | opp_overlap 5187915 5187917 5187921, overlap 5187915 CCTCGTCTTAGAAAC GCCAATGCCCGGG ACAAG CCCGGGCATTGAG TGTTGCGTCATGAAG TERM 3755 5187917 - 5187946 + T 78 -14.4 -3.10796 | gap 1, opp_overlap 5187916 5187915, overlap 5187915 5187921 CTCGTCTTAGAAACG C-CAATGCCCGGG ACAAG CCCGGGCATTGAG TGTTGCGTCATGAAG TERM 3756 5187921 - 5187941 + T 76 -14 -3.19522 | opp_overlap 5187916 5187915, overlap 5187917 5187915 TCTTAGAAACGCCAA TGCCCGGG ACAAG CCCGGGCA TTGAGTGTTGCGTCA TERM 3757 5187995 - 5187965 - T 76 -13.3 -3.39895 | opp_overlap 5187961, overlap 5187983 TGCGTCATGAAGCAA GCATGGCCGAAGC AAATA GCTTCGGCGACGC GGGCTCTCTCACCCG fixX 5188336 - 5188040 - | ferredoxin like protein, fixX fixC 5189677 - 5188370 - | electron-transferring-flavoprotein dehydrogenase fixB 5190796 - 5189690 - | electron transfer flavoprotein subunit beta fixA 5191666 - 5190821 - | electron transfer flavoprotein subunit beta TERM 3758 5191938 - 5191922 - R 95 -10.1 -4.40358 | ATGGATGTGAGAAAA TGCGGCG GCC CACCGCA GCAAAACGACCCGCC TERM 3759 5191970 - 5191945 - R 100 -16.1 -4.26903 | CCCACCGCAGCAAAA CGACCCGCCGC GAAC GCGACGGGCCG TCGATAGCAGGGCGC nifW 5192349 - 5191999 - | nitrogenase stabilizing/protective protein TERM 3760 5192165 - 5192144 - G 73 -12.9 -3.2963 | AGCACCGCCTTACAA CGGGCGGCG GCTT CGTCGCCCG GCAGGTGCTCGAGAT TERM 3761 5192287 - 5192259 - G 82 -17.5 -3.06796 | overlap 5192268 TCGGATCGTAGGCAA CGCCGAGAAGCTC GAA GAACTCCTCGGCG GATCCGGCACTCTGC nifV 5193571 - 5192378 - | putative homocitrate synthase nifS2 5194796 - 5193564 - | aminotransferase, class V nifU 5195779 - 5194793 - | putative nifU protein TERM 3762 5195038 - 5195062 + g 70 -10.6 -3.57144 | CGACCAGTCCAGCCG GCGGCGTCGC CGGAC GCGGCGCAGC TTTGGCAATCGGGCG RPA4610 5196127 - 5195807 - | HesB/YadR/YfhF TERM 3763 5196189 - 5196163 - R 78 -12.2 -3.7732 | GTCCGACATGAACAA GTGCAACCGCTG TGC CAGCGGAGGCAC AGCGGCAAACTACTG nifQ 5197245 - 5196535 - | nitrogen fixation protein NifQ fdxB 5197574 - 5197263 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3764 5197601 - 5197643 + r 71 -9.1 -3.75629 | TCGCGCGGCCAATGG GCCGCGCAGTTCG-GGCTGAG GCG TTCGGCCGCGATCAG-GCGGC TTTCGCTTCCAGCTC RPA4613 5197841 - 5197635 - | hypothetical protein RPA4614 5198324 - 5197860 - | hypothetical protein TERM 3765 5198123 - 5198177 + g 71 -15.1 -2.57931 | gap 1, overlap 5198122 AGAACAGCTCCAGCC GCCACAGCGTCTCCGGATCCGGATCA CCCA TGATCGGGATCTCGCGGCGCT-TGGC CTTATCGACGATGAA nifX 5198724 - 5198326 - | dinitrogenase iron-molybdenum cofactor biosynthesis nifN 5200153 - 5198780 - | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN nifE 5201627 - 5200164 - | nitrogenase molybdenum-cofactor synthesis protein nifE TERM 3766 5201514 - 5201538 + g 77 -12.1 -3.75598 | overlap 5201478 5201501 5201515 5201532 ACCGGCTGCGCCCCC CGGCTGCAGCG GTT TGCTGCAGCCC TTCTTGCGTTGCTTG TERM 3767 5201515 - 5201537 + g 76 -15.6 -2.84636 | overlap 5201478 5201501 5201514 5201532 CCGGCTGCGCCCCCC GGCTGCAGCG GTT TGCTGCAGCC CTTCTTGCGTTGCTT nifK 5203226 - 5201667 - | nitrogenase molybdenum-iron protein beta chain TERM 3768 5203254 - 5203291 + r 74 -13.4 -2.86343 | gap 1 CCCAAGAATTCGGTG ACGCGGCTCTTCCGGCG GCTGA CGCCGGAAG-GCCGGGG TGTGATGGTTCAGCT nifD 5204778 - 5203315 - | nitrogenase molybdenum-iron protein alpha chain nifH 5205746 - 5204850 - | nitrogenase reductase RPA4621 5207225 - 5206323 - | hypothetical protein RPA4622 5207519 - 5207241 - | hypothetical protein fixU 5207722 - 5207522 - | hypothetical protein RPA4624 5207993 - 5207760 - | hypothetical protein nifZ 5208292 - 5207993 - | nitrogen fixation protein NifZ RPA4626 5209074 - 5208289 - | hypothetical protein RPA4627 5209603 - 5209064 - | hypothetical protein hesB 5209963 - 5209607 - | HesB/YadR/YfhF TERM 3769 5209874 - 5209841 - G 76 -14.5 -3.1247 | gap 1 ACCGGCGATATCGAA CTGCGCCGACAGGCCG GAG CAGCC-GCCGGCGCTG ACCACCAGGCGGAAG ferN 5210195 - 5209974 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein nifB 5211775 - 5210219 - | nitrogenase cofactor biosynthesis protein NifB fer1 5212128 - 5211934 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3770 5212138 - 5212163 + r 71 -9.7 -3.81488 | GGCCATGGTCGGCTC CTGGTTCGCAG AGGG CTGCTGACCAG TTGTCTTTCAAGCCG TERM 3771 5212336 - 5212384 + r 100 -20.4 -3.53012 | gap 1, opp_overlap 5212341 5212343 5212345 5212348, overlap 5212340 5212348 TGCTTCGAAGCGCCC ACAGACAGACAAGGCGCGGCGCC AGGG GGCGTCGCGCCTTGTCTGA-TGA TTTCAAGCGAGAAGG TERM 3772 5212340 - 5212381 + r 100 -26.7 -2.90496 | opp_overlap 5212341 5212343 5212345 5212348, overlap 5212336 5212348 TCGAAGCGCCCACAG ACAGACAAGGCGCGGCGCC AGGG GGCGTCGCGCCTTGTCTGA TGATTTCAAGCGAGA TERM 3773 5212380 - 5212341 - R 100 -28 -2.88579 | opp_overlap 5212340 5212336 5212348, overlap 5212343 5212345 5212348 CGAAGCGCCCACAGA CAGACAAGGCGCGGCGCC AGGG GGCGTCGCGCCTTGTCTG ATGATTTCAAGCGAG TERM 3774 5212378 - 5212343 - R 100 -24.8 -2.99319 | opp_overlap 5212340 5212336 5212348, overlap 5212341 5212345 5212348 AAGCGCCCACAGACA GACAAGGCGCGGCGCC AGGG GGCGTCGCGCCTTGTC TGATGATTTCAAGCG TERM 3775 5212376 - 5212345 - R 100 -21.6 -3.05022 | opp_overlap 5212340 5212336 5212348, overlap 5212343 5212341 5212348 GCGCCCACAGACAGA CAAGGCGCGGCGCC AGGG GGCGTCGCGCCTTG TCTGATGATTTCAAG TERM 3776 5212348 - 5212373 + r 100 -19.7 -3.58802 | opp_overlap 5212345 5212343 5212341 5212348, overlap 5212340 5212336 CCCACAGACAGACAA GGCGCGGCGCC AGGG GGCGTCGCGCC TTGTCTGATGATTTC TERM 3777 5212373 - 5212348 - R 100 -17.5 -3.66896 | opp_overlap 5212348 5212340 5212336, overlap 5212345 5212343 5212341 CCCACAGACAGACAA GGCGCGGCGCC AGGG GGCGTCGCGCC TTGTCTGATGATTTC nifA 5214155 - 5212401 - | transcriptional regulator NifA fixR2 5215364 - 5214468 - | short-chain dehydrogenase TERM 3778 5214974 - 5214987 + g 70 -3.7 -4.45664 | overlap 5214971 TCAGCGCATGCAGCG GCCCG CCGC CGAGC TTTTCCTTCAATTCG TERM 3779 5216128 - 5216154 + G 83 -13.6 -3.76373 | overlap 5216129 GACGGTGTCGCCAGC CCGCTCGGCGGC GTC GGCGCCGAGCGC TTTGAGTATTCGCAG TERM 3780 5216129 - 5216153 + G 82 -17.1 -2.85503 | overlap 5216128 ACGGTGTCGCCAGCC CGCTCGGCGGC GTC GGCGCCGAGCG CTTTGAGTATTCGCA RPA4634 5215621 - 5216475 + | hypothetical protein feoB 5218511 - 5216625 - | ferrous iron transport protein B RPA4636 5218839 - 5218549 - | FeoA family protein RPA4637 5219202 - 5219363 + | hypothetical protein TERM 3781 5219503 - 5219472 - T 93 -14.5 -4.07687 | gap 1 ACCCTCCCCCTAAAA CGCCGATGCCCGGC ACGAG GCCGGGCAT-GACG CGGAGTCGAAGGGGG RPA4638 5221230 - 5219533 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 3782 5221315 - 5221264 - R 74 -13.2 -3.31022 | gap 3, opp_overlap 5221264 5221264 ATCAAATATCAGGAA TCGG-T-ACGACACCGCACGACCGC ACGGA GCGGCCG-GCGGTGTCGCGATCCAA TTCTGGAACCAACTT TERM 3783 5221541 - 5221510 - R 89 -13.1 -4.13014 | gap 1, opp_overlap 5221510 CTCAGACGGTGAAAA CGTCAATGGCCGGG GCGAG CCCGGCCAT-AACG TGGTTGAGAGAAAGA TERM 3784 5221591 - 5221625 + r 73 -11.2 -3.56594 | opp_overlap 5221589 CGCCGATGATACAGC CCGCACGGCCGGCGGA AGT TACGCCGCCCGCACGG TTTCGAGGAATTTGG RPA4639 5223303 - 5221609 - | methyl-accepting chemotaxis receptor/sensory transducer TERM 3785 5221999 - 5222056 + g 74 -14.8 -3.05384 | gap 3, overlap 5222025 CGCTTTCACCTCGGC CGCCACCACCG-CGAAGC-CGCGACCGGC CTC GCCGG-CGCGTGCCGCCTCGATGGTGGCG TTGAGTGCCAGCAGG RPA4640 5223895 - 5223509 - | hypothetical protein TERM 3786 5224002 - 5224025 + r 72 -2.3 -4.72188 | overlap 5223999 AGGAAACGCAAGCAG CGACCACCG AACCGG CGCTGATCG TTTCTTTTCCGTTGC TERM 3787 5224162 - 5224140 - R 100 -22 -4.20806 | opp_overlap 5224134 5224131 GAGGCCAAAAGCAAA CGGCCCGCGC AGG GCGCGGGCCG TGAGAGTAATTCGTG cbbM 5225577 - 5224192 - | ribulose bisphosphate carboxylase cbbA 5226721 - 5225636 - | fructose-1,6-bisphosphate aldolase cbbT1 5228750 - 5226783 - | transketolase cbbP 5229708 - 5228833 - | phosphoribulokinase TERM 3788 5229370 - 5229396 + g 73 -13.6 -3.23692 | CCACTGGGTGAAGTT GCCGGGCGGCAC GCC GTGCAGCGCGGC TTCCTCGTCGTCGTG cbbF 5230777 - 5229746 - | fructose-1,6-bisphosphatase TERM 3789 5230686 - 5230714 + g 90 -6.6 -5.252 | gap 1, overlap 5230676 TCGATCGATCCCGCG GCGATCGC-GCCG ACCG CGGCGGCGACAGC TTTTTTCTGCGGATC TERM 3790 5230873 - 5230894 + H 86 -6.7 -4.96848 | gap 1 AAGAGAAATTGCATT TTCC-TTGGT ACC ACCAAAGGAA TTTTTATATGAAGCG RPA4646 5231249 - 5231998 + | putative carboxylesterase kdgR 5232882 - 5232127 - | IclR family transcriptional regulator TERM 3791 5232915 - 5232946 + r 73 -10.8 -3.59979 | opp_overlap 5232915 5232917 5232918, overlap 5232916 ATCTCTTTGTTGAAA TAGCGACCGGCAGT CGTA ACTGCCGGTCGAAG TTTGCGATGCGCCGG TERM 3792 5232944 - 5232917 - R 84 -15.6 -3.34398 | opp_overlap 5232916 5232915, overlap 5232915 5232918 CTCTTTGTTGAAATA GCGACCGGCAGT CGTA ACTGCCGGTCGA AGTTTGCGATGCGCC TERM 3793 5232943 - 5232918 - R 87 -19.1 -2.60496 | opp_overlap 5232916 5232915, overlap 5232917 5232915 TCTTTGTTGAAATAG CGACCGGCAGT CGTA ACTGCCGGTCG AAGTTTGCGATGCGC RPA4648 5234051 - 5232963 - | ABC transporter RPA4649 5235878 - 5234085 - | ABC transporter permease potA 5237020 - 5235875 - | putative spermidine/putrescine transport system ATP-binding protein RPA4651 5237135 - 5238082 + | glutaconate CoA-transferase, subunit A RPA4652 5238082 - 5238849 + | CoA transferase, subunit B bisC 5238882 - 5241191 + | biotin sulfoxide reductase RPA4654 5241208 - 5241777 + | hypothetical protein fucA 5241859 - 5242545 + | L-fuculose phosphate aldolase RPA4656 5242576 - 5243535 + | sugar kinase TERM 3794 5244040 - 5244077 + G 74 -7.8 -4.20783 | gap 3 CGGCCAGTCGCACTA CGCGGCGTCGAAGTCCGCC GTG GTCGG-CTTC-AC-CCGCG TTTCTTCGATGGAAT kduD 5243582 - 5244328 + | putative 2-keto-3-deoxygluconate dehydrogenase RPA4658 5244361 - 5245347 + | zinc-binding dehydrogenase (related to alcohol dehydrogenase, NADPH quinone oxidoreductase) TERM 3795 5245376 - 5245397 + F 100 -17.3 -4.54727 | opp_overlap 5245373 GGATGGACGACATTG TGCCCGCGC TTCG GCGCGGGCA TTTTCGTTTGGGAGG RPA4659 5245424 - 5245927 + | acetyltransferase TERM 3796 5246085 - 5246111 + T 100 -14.4 -4.93877 | opp_overlap 5246087, overlap 5246087 TTCGCCCGAACGCAA AACGCCGCCTCT TTT GGAGGCGGCGTG TTTTGTTTGATCGGA TERM 3797 5246109 - 5246087 - T 100 -16.3 -4.27316 | opp_overlap 5246085 5246087 CGCCCGAACGCAAAA CGCCGCCTC TTTTG GAGGCGGCG TGTTTTGTTTGATCG TERM 3798 5246087 - 5246109 + T 100 -17 -4.08958 | opp_overlap 5246087, overlap 5246085 CGCCCGAACGCAAAA CGCCGCCTCT TTT GGAGGCGGCG TGTTTTGTTTGATCG TERM 3799 5247429 - 5247442 + T 81 -4.5 -5.06816 | GTCATCTTGCGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT TERM 3800 5249026 - 5248973 - T 93 -18.3 -3.28791 | overlap 5248980 5248986 ACCTTCTCTTGATAA CCGGAAATCCAAACCCTCACGTCTC TCTC GAAACGCAAGGCCTTGGAGTTCCGG CTATCGAAGGTGGGT TERM 3801 5249019 - 5248980 - T 76 -10.8 -3.69354 | overlap 5248973 5248986 CTTGATAACCGGAAA TCCAAACCCTCACGTCTC TCTC GAAACGCAAGGCCTTGGA GTTCCGGCTATCGAA TERM 3802 5249495 - 5249462 - T 74 -5.9 -4.40804 | gap 1, overlap 5249463 5249464 CACGATGTCAGAAAA CCCGCCAGGCTGCGCA TTG CGCAAAGCC-GGCGAA TACAAGTTGCGGACG TERM 3803 5251979 - 5251969 - T 75 -4 -4.74504 | ACCGCAAGCGAAAAA TGAA GGT TTCA CGAATTTCAGATTCC TERM 3804 5252326 - 5252313 - T 83 -5.2 -5.00884 | ATGGGGGTGAAAAAA CGGC ACTCGG GCCG AAATGGCGGAGAGAG otsA 5254110 - 5252629 - | Alpha,alpha-trehalose-phosphate synthase otsB 5255064 - 5254267 - | putative trehalose-6-phosphate phophatase, biosynthetic RPA4662 5256548 - 5255061 - | major facilitator transporter TERM 3805 5256598 - 5256622 + r 78 -10 -4.08216 | CAGCGCCGAACGTGG CGATCCATCG GCAAG CGATGGACCG TTTTGCGGAAGGTCA TERM 3806 5256697 - 5256677 - R 81 -14 -3.5594 | opp_overlap 5256674 5256677, overlap 5256668 AACGCACGCGCCAAA CCTGCGGC TGGGC GCCGCAGG TCGTCTAATTGCGCG TERM 3807 5256677 - 5256697 + r 72 -14 -2.69964 | opp_overlap 5256668 5256677, overlap 5256674 AACGCACGCGCCAAA CCTGCGGC TGGGC GCCGCAGG TCGTCTAATTGCGCG RPA4663 5258771 - 5256729 - | methyl-accepting chemotaxis sensory transducer TERM 3808 5258733 - 5258713 - G 72 -6.7 -4.25283 | opp_overlap 5258715 5258719, overlap 5258717 ACCTTGCCACGAAAA CGCAGAGCC GGT AGCGCCGCG GACTTATCCCGCGCT RPA4664 5259636 - 5258890 - | cupin domain-containing protein leuA 5259974 - 5261635 + | 2-isopropylmalate synthase TERM 3809 5261694 - 5261654 - f 86 -8.3 -4.66163 | gap 1, opp_overlap 5261655 5261665, overlap 5261657 ATTGCTACCCAAAAA GCAGGGATGCACCGGCTG ACGCCG CAGCCGGTGCATTGC-AC AGTTCTTCTTCGCTG TERM 3810 5261655 - 5261696 + F 73 -8.1 -3.97307 | gap 2, opp_overlap 5261654 5261657, overlap 5261665 TTGCTACCCAAAAAG CAG-G-GATGCACCGGCTG ACGCCG CAGCCGGTGCATTGCACAG TTCTTCTTCGCTGCA TERM 3811 5261692 - 5261657 - f 74 -13.3 -3.26405 | opp_overlap 5261655 5261665, overlap 5261654 GCTACCCAAAAAGCA GGGATGCACCGGCTG ACGCCG CAGCCGGTGCATTGC ACAGTTCTTCTTCGC coxS 5261956 - 5262426 + | carbon-monoxide dehydrogenase small subunit TERM 3812 5263374 - 5263363 - g 79 -7.2 -4.63218 | overlap 5263364 GGGCCTCGAAGAAAA CCGG CCGC CCGG TGAAATGGACCGGTG coxL 5262537 - 5264891 + | putative carbon-monoxide dehydrogenase large subunit coxM 5265000 - 5265800 + | carbon monoxide dehydrogenase chain C TERM 3813 5265821 - 5265843 + F 100 -22 -4.39329 | opp_overlap 5265806 5265805 TCCACTTCACGGCAA GCGGCGCGCG GTT CGCGCGCCGC TTTGTTGTGTGCGGT RPA4669 5265985 - 5267100 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 3814 5267182 - 5267144 - T 71 -13.2 -3.07113 | opp_overlap 5267110 5267109 CACGACGTGAGCGAA CCCGGAATCCAGAAATTA CTA TCACCTCGGGATTCCGGG TTCGCGCCTGACGGC fahA 5268492 - 5267227 - | fumarylacetoacetase maiA 5269440 - 5268784 - | putative maleylacetoacetate isomerase hmgA 5270783 - 5269437 - | homogentisate 1,2-dioxygenase TERM 3815 5270109 - 5270136 + g 75 -9 -4.08216 | overlap 5270112 GCCGATCGGGCCGCG CTCCGGCAGCGT GAAG GCGCCGCCGTAG TTTTCGCACAGATAA cphA1 5271793 - 5270840 - | putative beta lactamase precursor TERM 3816 5271847 - 5271900 + r 93 -18.9 -3.28712 | gap 1, opp_overlap 5271884 GCGCGCTGATCCTTC CAGGTCGTCATTCCGGG-GCGCTCGC GCA GCGAGCGAACCCGGAATCCCGAGCTG TTCTGCAACCGCCGC RPA4674 5272238 - 5272020 - | hypothetical protein TERM 3817 5272380 - 5272356 - R 83 -15.7 -3.16564 | GGGCGACGCGAGCAA GGCGTCTCGGC CTC GTCGAGACGCC CCCTCACCCGGTCCG TERM 3818 5272416 - 5272439 + r 90 -18.2 -3.10164 | CGCGATCCTGACCGA CCTCTCCCCG CACG CGGGGAGAGG TTAGGTCGTGCCTGC RPA4675 5274135 - 5272528 - | hypothetical protein RPA4676 5274265 - 5274762 + | MarR family transcriptional regulator TERM 3819 5275625 - 5275673 + G 70 -6.6 -4.1891 | gap 2, overlap 5275626 CGCCGTCACCCGCGC CTCGCGCGGCGAGCAGGTGCCGTG GAT CTCGTCATC-GCTCGCCGAG-GAC TTTGTGTTCACCCCC RPA4677 5274933 - 5276363 + | TPR repeat-containing caspace RPA4678 5276468 - 5277118 + | outer membrane protein precursor OprF RPA4679 5277277 - 5278164 + | component of multidrug efflux system TERM 3820 5278518 - 5278469 - g 70 -10.8 -3.51232 | gap 3, overlap 5278465 5278497 5278500 CGCGCTGGAAACCAA CACCGACCGCGCGCTCAACGACGTC AAA GACG-CGGTGA-CGCG-GGTCCGCG CCAACCTGCCGCAGA TERM 3821 5279969 - 5279920 - g 71 -2.7 -4.65895 | gap 1, overlap 5279964 GGCCCGAGGTAAAAA GCGTA-TTCGTCGATGGCGGCCGG GTG CCGCCCGGCATTCAGGAAGTGCGC CGCGCCTCGCTGATC RPA4680 5278164 - 5281316 + | putative efflux transporter TERM 3822 5281313 - 5281295 - f 72 -3.8 -4.56597 | gap 1 GCCGCCTGCCAAAAA GCCGTCG TTCTGG CG-CGGC TAGGTCGGTGGATCA RPA4681 5281358 - 5283175 + | AsmA family protein RPA4682 5283182 - 5284153 + | RND efflux membrane fusion protein precursor TERM 3823 5284130 - 5284172 + T 77 -12.6 -3.5764 | gap 1 GTGCGCCCGGTGCTG GCCGCC-GGCGCCTCGGCG AAATAA CACCGAGACGCCTGGCTGC TTTAGCCGTAACCTT RPA4683 5284469 - 5284215 - | hypothetical protein RPA4684 5285027 - 5286706 + | methyl-accepting chemotaxis receptor/sensory transducer lysK 5288384 - 5286747 - | lysyl-tRNA synthetase RPA4686 5289173 - 5288418 - | extracellular solute-binding protein, family 3 RPA4687 5289415 - 5291466 + | glycosyl transferase RPA4688 5292067 - 5291468 - | electron transport protein SCO1/SenC RPA4689 5292701 - 5292243 - | hypothetical protein RPA4690 5292915 - 5293253 + | hypothetical protein TERM 3824 5295080 - 5295048 - g 70 -11.2 -3.60948 | overlap 5295040 GAACAGACCGCCAAA GCCACCGACCAGAT CAGCC AGCAGGTCGGCGGC ATCCAGAGCGCCACC RPA4691 5293431 - 5295401 + | methyl-accepting chemotaxis receptor/sensory transducer RPA4692 5295550 - 5295927 + | hypothetical protein TERM 3825 5296060 - 5296090 + T 74 -14.8 -2.60032 | gap 1, opp_overlap 5296058, overlap 5296059 5296060 5296079 CGCTTCGAACGGATT CGTGATGGCCGGG CTTCGT CCCGGCCATC-CG CGTTTTTCGGACGGC TERM 3826 5296060 - 5296092 + T 100 -13.5 -4.56597 | gap 1, opp_overlap 5296058, overlap 5296060 5296059 5296079 CGCTTCGAACGGATT CGTG-ATGGCCGGG CTTCGT CCCGGCCATCCGCG TTTTTCGGACGGCGC RPA4693 5297281 - 5296118 - | putative FMN oxidoreductase RPA4694 5297448 - 5298446 + | hypothetical protein ligR 5298468 - 5299370 + | LysR family transcriptional regulator TERM 3827 5299374 - 5299424 + F 72 -11.8 -3.28712 | CTGCCGACCTGATTC CGGCTCACGGTTTTCGGCACGG GCGCTTG CCATGCCGGAAGCCGATAGCTG TTATAGACCACCCGC FldA 5299497 - 5300615 + | hypothetical protein TERM 3828 5300649 - 5300634 - f 75 -3.2 -4.90471 | overlap 5300638 ATCGAAAAGACAAAA CTAGCA TCGA TGCTCG CTGAGTTGGCGAGCG ligJ 5300785 - 5301813 + | 4-oxalomesaconate hydratase FldZ 5301816 - 5302511 + | hypothetical protein TERM 3829 5302694 - 5302722 + G 74 -10.4 -3.81951 | gap 2, opp_overlap 5302694 GTTGCGCTGACGACA TCGCATGCGGAGCT TGC AGC-CCGCA-GCGA TTTCATCATCTCGGC FldX 5302511 - 5303440 + | dehydrogenase ligI 5303694 - 5304608 + | 2-pyrone-4,6-dicarboxylic acid hydrolase TERM 3830 5304625 - 5304679 + F 88 -15 -3.76224 | gap 3, opp_overlap 5304609 5304607 CCGATCGCCGCGCGG CGTGC-GCGGACCTCACC-TCTCCCCG CACG CGGGGAGACGGAGCGG-CCGCCGCCCG TTTCGTAACTAACAA ligA 5304715 - 5305104 + | protocatechuate 4,5-dioxygenase subunit alpha ligB 5305104 - 5305958 + | protocatechuate 4,5-dioxygenase subunit beta ligC 5305960 - 5306919 + | 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase TERM 3831 5306976 - 5306955 - f 77 -13 -3.54424 | opp_overlap 5306955 TCGCATTGGTTCAAA TGGCCGGG CACCGT CCCGGCCA TTTTCTTGATCGAGC TERM 3832 5306955 - 5306976 + F 100 -13 -4.71426 | opp_overlap 5306955 TCGCATTGGTTCAAA TGGCCGGG CACCGT CCCGGCCA TTTTCTTGATCGAGC RPA4704 5307112 - 5307510 + | hypothetical protein TERM 3833 5307527 - 5307572 + F 72 -11.9 -3.27525 | gap 1, opp_overlap 5307524, overlap 5307523 CGCTGGAATTCAGCC CCCAGGCGCGATTGTTCTGCCT CTA AGGTCGGA-GATCGCGCCTGAG TTGCGTTTACACGAC hisE2 5307616 - 5308011 + | phosphoribosyl-ATP pyrophosphohydrolase RPA4706 5308113 - 5308694 + | DedA family protein RPA4707 5308747 - 5309424 + | hypothetical protein RPA4708 5309570 - 5310538 + | 2-nitropropane dioxygenase, NPD RPA4709 5310696 - 5311469 + | hypothetical protein RPA4710 5311592 - 5311912 + | hypothetical protein RPA4711 5312066 - 5312764 + | hypothetical protein RPA4712 5314566 - 5312818 - | TPR repeat-containing protein RPA4713 5314811 - 5315782 + | hypothetical protein RPA4714 5316345 - 5315755 - | hypothetical protein modC 5317614 - 5316493 - | molybdate ABC transporter ATP-binding protein modB 5318297 - 5317611 - | molybdate ABC transporter permease TERM 3834 5318121 - 5318106 - G 82 -6.1 -4.75289 | CACCAGAAGATAAAA GCCGA GCACGG TCGGC GGCAGCACCAGCGGC TERM 3835 5318358 - 5318335 - R 91 -18.2 -3.14132 | GGCGCGCCGTATGAA CCTCTCCCCG CGTG CGGGGAGAGG TCGACCGTCGGAGCG modA 5319308 - 5318535 - | molybdenum ABC transporter periplasmic molybdate-binding protein TERM 3836 5319385 - 5319358 - R 76 -9 -4.09685 | gap 1, opp_overlap 5319358 5319363 5319367 CGTGATGGCGGAAAA GGCGAGCGG-CGC GAC GCGGCCCCGCGCC TCGTTTGGTGATGAT modE 5320244 - 5319453 - | ModE family transcriptional regulator TERM 3837 5320019 - 5320048 + g 77 -13.5 -3.53012 | gap 1, overlap 5320019 5320027 TCGGGGTCAGTTGCG CCC-CGCCGCCGGC CTT GCCGCCGGTGCGGG TTTCCAGCAGCGGAC RPA4719 5320343 - 5320552 + | molybdo-pterin binding protein TERM 3838 5320640 - 5320582 - T 74 -12.5 -3.28368 | gap 2, overlap 5320573 5320583 ATCCAAGCGACAACA GGTCGCGCCCACCCATTACTTCAGCGCCT CGC AGATGCTGACGTGA-GGGTGGGCGGGA-C GGCGAAAGCTGCGAC TERM 3839 5320640 - 5320583 - T 86 -18.5 -2.56539 | gap 1, overlap 5320573 5320582 TCCAAGCGACAACAG GTCGCGCCCACCCATTACTTCAGCGCCT CGC AGATGCTGACGTGA-GGGTGGGCGGGAC GGCGAAAGCTGCGAC RPA4720 5321166 - 5320597 - | hypothetical protein TERM 3840 5323009 - 5322976 - g 100 -21.1 -3.29461 | gap 1 CAAGGCGCGCGAGAA CGGCGACGCCGGCGTG CGT CACGCCGGCATC-CCG GCGCTGACCAAGCTG TERM 3841 5324549 - 5324527 - g 70 -6.3 -4.1899 | gap 2, opp_overlap 5324531, overlap 5324529 5324530 CGACGCGATGGAAAA GAGCCAGCCGG GCA CCGGC-GG-TC TGTACTCGGTCAGCG RPA4721 5321423 - 5326636 + | E351244 pyruvate-flavodoxin oxidoreductase RPA4722 5326633 - 5329467 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase TERM 3842 5329482 - 5329452 - f 76 -9.7 -4.0156 | gap 1, overlap 5329449 5329455 GGAGAGCAAGAAGAA GC-ACGGCTTCGCG TAAG CGCGAAGTCGCAGC CCATCGTCATCCCCT TERM 3843 5329577 - 5329606 + F 73 -10.8 -3.67597 | gap 1 GATTGCTTCGTCGCT TCGCTC-CTCGCC AGGGC GGCGAGAGAGTGA TTATTACATGGCACG TERM 3844 5329688 - 5329671 - f 88 -7.7 -4.82901 | CCGCTCCTACAAAAA CTTCGCA TCGT CGCGAAG TAACAGGTCACGGAT TERM 3845 5332209 - 5332190 - g 70 -2 -4.59773 | overlap 5332193 CGGCACCGGCAAAAA CAAGATCG GCTT CGATCAGG TGCCGGTCGACCGTG TERM 3846 5332206 - 5332193 - g 75 -6.7 -4.41633 | overlap 5332190 CACCGGCAAAAACAA GATCG GCTT CGATC AGGTGCCGGTCGACC polA 5330466 - 5333543 + | DNA polymerase I pyrE 5333861 - 5334424 + | orotate phosphoribosyltransferase TERM 3847 5334438 - 5334453 + F 75 -11.8 -3.60627 | opp_overlap 5334420 GAGCGCCGCGGACGC CGCCGG AAAC CCGGCG TTTACCATCCCATCC TERM 3848 5334512 - 5334473 - f 85 -14.2 -3.60627 | gap 1 CCATCCCATCCTAAA GTCGCGACCA-ACAGCGGC CTT GCCGCAGGGTGGTCGCGTC GGTGGAGTGGGCGTT RPA4725 5334527 - 5335330 + | hypothetical protein TERM 3849 5335495 - 5335444 - T 73 -8.1 -4.06419 | gap 3, overlap 5335445 GCCTCGGACAAATAA CCGCGAG--ATTCCGGGTTCGCTCAC TTC GTGAGCGC-CCCGGAATGACTCCCGT AAAGGCTTCGCTCGC RPA4726 5336029 - 5335598 - | hypothetical protein TERM 3850 5336081 - 5336067 - H 71 -12.8 -3.08912 | GACCATACATATAGA CGGCGC ACC GCGCCG AATCGCAATGATAAC TERM 3851 5336265 - 5336251 - H 73 -7 -4.36914 | overlap 5336253 CGTTTTTGCACAAAA GCCGGG CAT CCCGCC GCAACGATGCCCTCG glgA2 5336312 - 5338858 + | glycogen/starch/alpha-glucan phosphorylase TERM 3852 5338974 - 5339015 + F 83 -15.9 -3.12351 | gap 1, overlap 5338978 TTTTCCGACACCTGC GATATTCCGGGTTCGCGCGT TTC ACGCGCGC-CCCGGAATGAC TTGCGTGTGGGCGCG TERM 3853 5338978 - 5339011 + F 83 -17.5 -2.56095 | gap 1, overlap 5338974 CCGACACCTGCGATA TTCCGGGTTCGCGCGT TTC ACGCGCGC-CCCGGAA TGACTTGCGTGTGGG RPA4728 5339139 - 5339972 + | hypothetical protein TERM 3854 5339989 - 5340007 + F 74 -11.6 -3.53444 | overlap 5339990 TTGACGCAGCGCTCC GGCGCGCG TCG CGCGCGCA TTTGAAGGGGCGTCA TERM 3855 5339990 - 5340006 + F 78 -15.1 -2.71924 | overlap 5339989 TGACGCAGCGCTCCG GCGCGCG TCG CGCGCGC ATTTGAAGGGGCGTC rocF 5340028 - 5341011 + | arginase RPA4730 5341259 - 5342878 + | ABC transporter ATPase RPA4731 5344219 - 5343026 - | hypothetical protein RPA4732 5344380 - 5344958 + | ChaC-like protein plsC 5345784 - 5344975 - | phospholipid/glycerol acyltransferase RPA4734 5346565 - 5345798 - | hypothetical protein RPA4735 5347444 - 5346668 - | hypothetical protein ftsE 5348317 - 5347658 - | putative cell division ATP-binding protein FtsE, ABC type transporter TERM 3856 5349306 - 5349272 - g 75 -14.3 -3.28712 | opp_overlap 5349300, overlap 5349238 TCGCCTGGTTCAGAA CGCGCCTCGCCTC-GCC GCC GGCGGAGGCGCG-CGCG ATCGACGTGCGCTTC RPA4737 5348461 - 5349357 + | Zinc finger/thioredoxin putative RPA4738 5349417 - 5349797 + | response regulator receiver (CheY-like protein) RPA4739 5352557 - 5349996 - | hypothetical protein pcaC 5352717 - 5353097 + | putative 4-carboxymuconolactone decarboxylase lysA 5354597 - 5353332 - | diaminopimelate decarboxylase RPA4742 5354887 - 5354606 - | hypothetical protein argH 5356339 - 5354942 - | argininosuccinate lyase RPA4744 5356435 - 5357121 + | thioredoxin-like protein TERM 3857 5357239 - 5357206 - T 88 -17.5 -3.00525 | gap 1, overlap 5357201 TGTTGCGAAAGGAGA TTCCGGGCTCGCGAGC TGC GCTCGCGC-CCCGGAA TGACTGCTCAACAGC RPA4745 5357507 - 5357277 - | hypothetical protein RPA4746 5358392 - 5357574 - | putative NAD(P)H quinone reductase TERM 3858 5357736 - 5357755 + g 70 -10.6 -3.53012 | opp_overlap 5357702, overlap 5357731 CGTGCGCATTCGCGC CCGCAGCC GCTC GGCCGCGG TTTCGAACCCGACGG RPA4747 5358469 - 5359383 + | LysR family transcriptional regulator hbdA 5360279 - 5359398 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 3859 5360405 - 5360422 + r 76 -14.1 -3.14132 | opp_overlap 5360405 GGCTTCTGCAACGAA CCCGGCC CGAG GGCCGGG TTCGTCCGCCGCGAG TERM 3860 5360422 - 5360405 - R 77 -14.1 -3.33696 | opp_overlap 5360405 GGCTTCTGCAACGAA CCCGGCC CGAG GGCCGGG TTCGTCCGCCGCGAG etfA 5361389 - 5360445 - | electron transfer flavoprotein subunit alpha etfB 5362138 - 5361389 - | electron transfer flavoprotein subunit beta TERM 3861 5361518 - 5361551 + g 77 -12.4 -3.68936 | opp_overlap 5361509, overlap 5361511 5361510 5361521 CGAAACGTCGACGCC GAAGTCGGCCGCGG TCTTCT CCGCGATCGGCTTC TTCTTGGCCTTCATG TERM 3862 5361521 - 5361548 + g 70 -8.3 -3.97139 | opp_overlap 5361509, overlap 5361511 5361510 5361518 AACGTCGACGCCGAA GTCGGCCGCGG TCTTCT CCGCGATCGGC TTCTTCTTGGCCTTC TERM 3863 5362250 - 5362232 - R 72 -2.2 -4.81249 | overlap 5362224 CGGCAAAGCCAAAAA CCGCCTTG TTC CCTAGCGG TTCTGGCCCGGCACC RPA4751 5362816 - 5362244 - | hypothetical protein RPA4753 5365239 - 5364022 - | histidine kinase with a response regulator receiver domain rbn1 5363202 - 5364095 + | ribonuclease BN TERM 3864 5364973 - 5364925 - GT 78 -12.4 -3.70773 | gap 2 CCGCAGATCGAAGAA CTCCGAGCGCAACCCGAGCCCGGT GGT ACCGAGC-CGGGCGGCG-TCGACG AACAGCGTCGCAAGG RPA4754 5366220 - 5365339 - | glutamyl-Q tRNA(Asp) synthetase TERM 3865 5366578 - 5366618 + G 72 -11.8 -3.53012 | gap 1, opp_overlap 5366584 GTTCGAGCACGACGC GATCAAGCGGGCGCGGGCC GACC GGCTCGCGCG-GCTCGGTC TTTCAACCGCGAAGA TERM 3866 5366913 - 5366931 + G 77 -16 -2.94416 | opp_overlap 5366879 AACCCTGGCGCCCGC TGCGCGGC GCG GCCGCGCA TCTGTGGTGGGCCTA RPA4755 5366291 - 5367061 + | HhH-GPD RPA4756 5367639 - 5367193 - | nickel responsive regulator TERM 3867 5367524 - 5367559 + g 73 -12.6 -3.40403 | gap 1 GCGGTCTGCTGGATC CCGATCCGAGCCAGATC GCG GATC-GCCTCGGAGCGG TTCTGGTAGCCGCGC TERM 3868 5368502 - 5368449 - g 70 -10.2 -3.63515 | GGCGATGCCCAAGAA CCT-CGCCGAGGTGACGGTCGGCAGC TTCG GCTATCG-CCGGCTGCTCGGCGCAGG TTCGACGCGGGTCGG RPA4757 5367760 - 5369976 + | outer membrane receptor for iron transport TERM 3869 5370014 - 5370034 + F 84 -8.2 -4.42788 | overlap 5370030 TTCGGTTTCTGATCG CGACCGCG CGCGA CGCGTTCG TTTTGTGAACTTCGC TERM 3870 5370114 - 5370073 - f 93 -13.8 -4.11692 | gap 2, overlap 5370080 CAGGGAGCTCCAAAA CGACGAACGCGCGCCGACGT GTGA ACGCCGACGCGCGC-C-TCG TAACTCGCTGGTTCC TERM 3871 5370109 - 5370080 - f 93 -19.3 -3.37533 | overlap 5370073 CTCCAAAACGACGAA CGCGCGCCGACGT GTGA ACGCCGACGCGCG CCTCGTAACTCGCTG RPA4758 5370412 - 5370765 + | hypothetical protein RPA4759 5372428 - 5370812 - | glycosy hydrolase family protein TERM 3872 5371225 - 5371280 + g 87 -14.7 -3.78934 | gap 2 CGGCCTGGTCCGACG CGTCCCACTGCATCGGCGTGCGGCAGC CATC GCGGCCG-ACACCGATGCCG-GGTACG TTCTTCTCGAACGGA RPA4760 5372942 - 5373475 + | hypothetical protein TERM 3873 5373508 - 5373532 + F 100 -17.2 -5.00884 | opp_overlap 5373511, overlap 5373519 5373522 CTTATTGAGTTGTTA GAAGCGCCGG CTTGT CCGGCGCTTC TTTTTTGCGCCGCAT TERM 3874 5373529 - 5373511 - f 74 -13.1 -3.30243 | opp_overlap 5373508 5373519 5373522 ATTGAGTTGTTAGAA GCGCCGG CTTGT CCGGCGC TTCTTTTTTGCGCCG RPA4761 5373755 - 5374279 + | hypothetical protein TERM 3875 5374290 - 5374261 - f 77 -13.6 -3.38316 | overlap 5374246 GCACGACCTAAGCAA CGCGGTCGGC AAGTCCTGAG GCCGACCGCG AAACGGTCGTGCCGC TERM 3876 5375104 - 5375121 + G 74 -12.7 -3.53012 | GCGAGATCGACACCC GCCGCAG GCTG CTGCGGC TTTGCCCGGACACCC ogt2 5374977 - 5375570 + | methylated-DNA--protein-cysteine methyltransferase RPA4763 5377003 - 5375567 - | cation efflux pump TERM 3877 5377308 - 5377331 + H 81 -7.4 -4.42386 | gap 1, opp_overlap 5377304, overlap 5377304 CCCGACAATCAGCTA CGCGATCTTCG GAT CGC-GATCGCG TTTTCTAGATGCCGA RPA4764 5377514 - 5379493 + | metallo-phosphoesterase:Tat pathway signal RPA4765 5380686 - 5379553 - | 2'-deoxycytidine 5'-triphosphate deaminase TERM 3878 5380857 - 5380829 - H 70 -10.3 -3.59649 | gap 1, opp_overlap 5380850 AAACAAGTCGCTAAA CAGGCCGGGGAC GTTGTG GTCC-CGGCCCG AGGGTTGAGCCCCAG TERM 3879 5380850 - 5380877 + H 100 -11.2 -5.60993 | gap 1, opp_overlap 5380829 GGGGACGTTGTGGTC CCGGCCCGAGGGT TGA GCCC-CAGGCCGG TTTTTTTGTGCCCGC metZ 5380923 - 5382134 + | O-succinylhomoserine sulfhydrylase TERM 3880 5382193 - 5382169 - T 85 -15.7 -3.45945 | opp_overlap 5382165 GTGAGCGAGAAGTAA CGGGACGACGC ATC GCGTCGTCCGG GGACTGCTTCAGAGA RPA4767 5383250 - 5382282 - | GDSL family lipase TERM 3881 5382838 - 5382817 - G 73 -13 -3.30124 | TCGGAGGCCGGATAA TGGCGGCG GAGCTG CGCCGCCA GCCGGTTCGGATAGG TERM 3882 5383221 - 5383209 - G 89 -10.5 -4.56597 | opp_overlap 5383209 5383216, overlap 5383194 5383210 CGCCGTCGCCAAAAA CGCCG CGA CGGCG GCCGGTTTCAAAGGG RPA4768 5384029 - 5383250 - | hypothetical protein opgC 5385291 - 5384026 - | putative OpgC protein apaG 5385542 - 5385934 + | ApaG hslO 5387011 - 5386010 - | Hsp33-like chaperonin TERM 3883 5387152 - 5387203 + r 81 -15.9 -3.05384 | gap 3, opp_overlap 5387134 GCGGACGCAGGGCAC GCCGGATGA-GGGGCCGACTGGAGCG CTG TGCCCC-G-CGGCCCCCTCACCCGGC TTCGCTACGCGAAGC argF 5388215 - 5387283 - | ornithine carbamoyltransferase argD 5389423 - 5388212 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 3884 5389456 - 5389444 - H 74 -4.7 -4.62336 | overlap 5389445 ATCCGATCGGAAAAA GCGGG CCG CCGGC CGGACGCGTCACGCG TERM 3885 5389539 - 5389516 - H 100 -18.2 -4.06055 | opp_overlap 5389512 5389511 ACCCCGGAAACGAAA CGTGCCGCCT TTCC AGGCGGCACG TGGGATTATTCTAGA RPA4774 5389767 - 5390408 + | GcrA cell cycle regulator TERM 3886 5390610 - 5390575 - T 100 -22 -4.56597 | gap 1, overlap 5390578 TGGTCGCCCGAAAAA TCAGGAGCCCGCACAGC AAG GCTGCGCGGGCTCC-GA ACTAATCACAGTCGT TERM 3887 5390608 - 5390578 - T 100 -24.8 -3.23708 | overlap 5390575 TCGCCCGAAAAATCA GGAGCCCGCACAGC AAG GCTGCGCGGGCTCC GAACTAATCACAGTC phoB 5391363 - 5390650 - | winged helix family two component transcriptional regulator phoU 5392157 - 5391441 - | phosphate uptake regulator, PhoU pstB 5393002 - 5392181 - | phosphate ABC transporter permease pstA 5393862 - 5392999 - | phosphate ABC transporter permease pstC 5394865 - 5393864 - | phosphate ABC transporter permease TERM 3888 5394554 - 5394521 - G 72 -13.2 -3.14344 | CAGTTCGGTGAGGAA GATCGCGATGCCGA GGCCGA CCGGGATCGCGATC ATCATCGCGATCAGC TERM 3889 5394913 - 5394901 - R 70 -10.5 -3.54424 | CTGCAGGGCCCGAAA CCGCG CCT CGCGG CTGGAGATCTGAATT pstS1 5396089 - 5395079 - | periplasmic phosphate binding protein TERM 3890 5396160 - 5396171 + r 74 -5.8 -4.41241 | overlap 5396144 5396170 CGCCCGTCTACGAGC GGTC GGTT GACC TTTTATGAGGGTTTG phoR 5397587 - 5396238 - | two component sensor histidine kinase phoR RPA4782 5398625 - 5397591 - | hypothetical protein RPA4783 5399169 - 5398873 - | hypothetical protein TERM 3891 5399023 - 5398968 - G 100 -18.2 -4.32034 | gap 1, overlap 5399003 CCATGACGAGGAAAA GGTCGAGCCAGTAGCCGGCCCGGCCGG GAA CCAGACGGGCGAGCGAC-AGCCCGACC AGCACCGCTGCGACG RPA4784 5400567 - 5399173 - | OmpA/MotB domain-containing protein TERM 3892 5400357 - 5400410 + g 100 -14.4 -4.36914 | opp_overlap 5400364 CGCGGCGCCCTTCTT CGGAGAACGCCTCGGCGGTCAGCG TGATGT CGCGGCCCGCTGCGGTGATCTTCG TTTTGTCGAGGACGG TERM 3893 5400788 - 5400804 + G 70 -10.1 -3.64716 | opp_overlap 5400778, overlap 5400786 TTACACCGGCGCGCA TCGGGTG CTG CGCCCGA TCTTTTCCGGAATCG RPA4785 5400723 - 5401781 + | polysaccharide deacetylase TERM 3894 5401759 - 5401781 + F 72 -7.7 -4.20783 | gap 1, overlap 5401761 5401764 CGATGTGGAACGGCT TC-CGCCGCG TCGC TGCGGCGTGA TTTCTTGACTCACCT TERM 3895 5401996 - 5401974 - g 77 -13.4 -3.5393 | overlap 5401963 ATCACCGCGCGCAAA GCAGCGGCCT GTC AGGCCACCGC CGACGAACTCACCGA TERM 3896 5402264 - 5402228 - g 72 -13.5 -3.14132 | GTTCTTCCTGACCAA GGCGCTGGCGCCGCTGC TGC GCGCCGCCGCGAGCGCC GAACAGCCCGGCAAG TERM 3897 5402554 - 5402604 + G 76 -14.7 -3.17075 | CCGTGTTCCTCGCCT CGCGCGCCGGCGACT-ACGTGGTCG GCT CGACCGTGACGGTCGACGGCG-GCG TTGCCTTCGCCAACC rhlG 5401842 - 5402648 + | short-chain dehydrogenase/reductase SDR TERM 3898 5402718 - 5402752 + F 100 -18.5 -4.18197 | opp_overlap 5402709, overlap 5402719 CATGAATTGCCTACC GCGCAGCCCGCGCCC CCAAA GCGCGCGGGCTGCGG TTTTGCGTCCCACCT TERM 3899 5402719 - 5402751 + F 100 -22 -3.10597 | opp_overlap 5402709, overlap 5402718 ATGAATTGCCTACCG CGCAGCCCGCGCCC CCAAA GCGCGCGGGCTGCG GTTTTGCGTCCCACC TERM 3900 5402796 - 5402814 + F 73 -13.2 -3.18429 | opp_overlap 5402793 5402792 5402796 TTGAATTATAATGCA TCGAACGG CAT CCGTTCGA TTGCTGGCGATTTTG RPA4787 5402871 - 5403788 + | anaerobic benzoate catabolism transcriptional regulator ugpB2 5405123 - 5403795 - | extracellular solute-binding protein, family 1 TERM 3901 5407371 - 5407329 - g 83 -12.7 -4.12188 | gap 1, overlap 5407302 TTATCATGCCGAAAA CCGCC-ACCGGTGGAACGGC ATCC GCCGCCCCACCCATCGACGG AAACCTGCAATGGCC RPA4789 5405300 - 5407411 + | periplasmic sensor signal transduction histidine kinase TERM 3902 5407491 - 5407461 - f 72 -11.9 -3.29324 | gap 1, overlap 5407456 5407464 CGCACGGAAATGGAA GATCGCGGTGATCG ACGA CGA-CACCGCGGTC CACGACGGCACCCGC RPA4790 5407468 - 5409120 + | response regulator receiver sensor signal transduction histidine kinase RPA4791 5409117 - 5409857 + | two-component transcriptional regulator TERM 3903 5409918 - 5409948 + F 84 -15.6 -3.27525 | overlap 5409914 CGCTTTTTCGGCCGA GTGTTTCGTCGC GGCTCTG GCGACGAAACAC TTCCATTTCGCCACG RPA4792 5410062 - 5410673 + | RNA polymerase sigma factor TERM 3904 5410944 - 5410970 + F 100 -15.2 -4.36127 | opp_overlap 5410944 TAGGCCTCCAAGGGA CCCGGACGAG ATGCCCC CTCGTCCGGG TTTTCGCTTGTTCGA TERM 3905 5410970 - 5410944 - f 76 -15.9 -2.52676 | opp_overlap 5410944 TAGGCCTCCAAGGGA CCCGGACGAGA TGCCC CCTCGTCCGGG TTTTCGCTTGTTCGA QxtA 5411181 - 5412587 + | cytochrome bd ubiquinol oxidase, subunit I qxtB 5412601 - 5413611 + | cytochrome d ubiquinol oxidase, subunit II RPA4795 5413608 - 5413739 + | hypothetical protein RPA4796 5413781 - 5414374 + | ErfK/YbiS/YcfS/YnhG RPA4797 5414421 - 5415455 + | ABC transporter, amino acid binding protein RPA4798 5416940 - 5415801 - | putative acyl-CoA dehydrogenase RPA4799 5418291 - 5417107 - | acyl-CoA dehydrogenase RPA4800 5420268 - 5419057 - | transporter RPA4801 5421604 - 5420357 - | major facilitator superfamily permease RPA4802 5422411 - 5421680 - | hypothetical protein TERM 3906 5423772 - 5423804 + G 75 -13.5 -3.36073 | gap 2, opp_overlap 5423789, overlap 5423771 GAACTGATCGTCGAT GGCGGCCTGC--GCG ACAAG CGCCAGCAGGCCGCC TATTTCGGCAATGTG RPA4803 5422839 - 5424950 + | putative outer membrane hemin/siderophore receptor protein TERM 3907 5425023 - 5425053 + F 100 -15.5 -5.20216 | gap 1, opp_overlap 5425014 5425023 AACCAACGTCGAACA GCCTCCGAGC-GCC GAAA GGCTGTTCGGAGGC TTTTTTCGTGCTATC TERM 3908 5425053 - 5425023 - f 71 -13.3 -3.07005 | gap 1, opp_overlap 5425023, overlap 5425014 AACCAACGTCGAACA GCCTCCGAGC-GCC GAAA GGCTGTTCGGAGGC TTTTTTCGTGCTATC TERM 3909 5425223 - 5425202 - g 80 -15.9 -3.2963 | AGCAGTCCTCGACAA CATGGCGCG CCTG CGCGCCATG CGGCTCGCCCGTGAA RPA4804 5425107 - 5425394 + | hypothetical protein RPA4805 5425568 - 5425762 + | hypothetical protein RPA4806 5427049 - 5425793 - | hypothetical protein RPA4807 5427284 - 5428504 + | branched chain amino-acid ABC transporter substrate-binding protein TERM 3910 5428563 - 5428531 - T 85 -14.8 -3.62572 | opp_overlap 5428531 5428537 CACCACGACCTCAAA CGCGCATGGCCGGG CTCGT CCCGGCCATTTGCG TTGGTGGAGTTGAAC TERM 3911 5428531 - 5428563 + T 89 -17 -3.18681 | opp_overlap 5428531, overlap 5428537 CACCACGACCTCAAA CGCGCATGGCCGGG CTCGT CCCGGCCATTTGCG TTGGTGGAGTTGAAC TERM 3912 5428537 - 5428557 + T 84 -14 -3.78329 | opp_overlap 5428531, overlap 5428531 GACCTCAAACGCGCA TGGCCGGG CTCGT CCCGGCCA TTTGCGTTGGTGGAG RPA4808 5429905 - 5428619 - | hexuronate transporter TERM 3913 5429573 - 5429555 - G 75 -13.1 -3.35679 | CGCCGCGACCGAGAA CGCCGGC CCTTC GCCGGCG CCGAGAATGATGCGG RPA4809 5430178 - 5430831 + | putative ABC transporter, ATP-binding protein RPA4810 5430828 - 5433293 + | hypothetical protein TERM 3914 5433334 - 5433369 + G 70 -11 -3.54424 | gap 1, overlap 5433349 ACCGGCAGCCTGCTC GCCGCAGCGATCGCGCC GCC GGCGTGGGCGCAG-GGC TTTGCCGGGCTCGGC RPA4811 5433283 - 5434368 + | hypothetical protein RPA4812 5434435 - 5434827 + | membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) TERM 3915 5434962 - 5434988 + T 71 -11.5 -3.53298 | gap 1, opp_overlap 5434963, overlap 5434958 5434963 TCATGTCAGCGAAAA AGCCGGCGC-CC TTGC GGAGCGCCGGCC TTCATTTCAGATGCT TERM 3916 5434987 - 5434963 - T 100 -16.4 -4.66609 | opp_overlap 5434962 5434958 5434963 CATGTCAGCGAAAAA GCCGGCGCCC TTGCG GAGCGCCGGC CTTCATTTCAGATGC TERM 3917 5434963 - 5434987 + T 75 -15 -2.71497 | gap 1, opp_overlap 5434963, overlap 5434962 5434958 CATGTCAGCGAAAAA GCCGGCGC-CC TTGC GGAGCGCCGGC CTTCATTTCAGATGC RPA4813 5436208 - 5435015 - | branched chain amino acid ABC transporter periplasmic-binding protein RPA4814 5437979 - 5436294 - | hypothetical protein TERM 3918 5437430 - 5437396 - G 72 -13.5 -3.18383 | opp_overlap 5437398 AGCTTCACCGACCAA GCCGGTGCCAGCGCC CGTTC GATGCCGGCACCGAC GGTCCAGCCCCACCG TERM 3919 5437979 - 5438027 + r 86 -18.3 -2.52464 | gap 1, opp_overlap 5437989 5438004 5438007 CAAGGATTCGACTCA TGGCATCACACTCTGCTCGGCA CAACGA TGCCGAGCAGAGTGCGC-GCCA TGGATTAAAAAAGCG TERM 3920 5438018 - 5437989 - R 87 -18.7 -2.79915 | opp_overlap 5437979, overlap 5438004 5438007 ACTCATGGCATCACA CTCTGCTCGGCAC AACG ATGCCGAGCAGAG TGCGCGCCATGGATT htpG 5439953 - 5438067 - | heat shock protein 90 TERM 3921 5438390 - 5438412 + g 72 -13.4 -3.14344 | overlap 5438393 AGGCTTTGACGTCGG AGACGCGCTC ACC GAGCGCGTCC TTGATCACCGCGATC RPA4816 5441417 - 5440041 - | periplasmic sensor signal transduction histidine kinase TERM 3922 5440283 - 5440332 + g 75 -14.1 -3.29461 | opp_overlap 5440275 TGCAAAACTCGTCGG CGTCGCACGCCGTGCCGATCCGC ACCC GCGACTTGGCGTGGCGGGTGGCG TTGTCGAGCAGATTG TERM 3923 5441383 - 5441341 - G 72 -11.4 -3.57263 | gap 3, opp_overlap 5441364 ATGGTGAGCGCGAAA CCGGCGACGCTCAGC-GCGAT CAGG ATCGCCGC-G-GCACCGCCGG CGATCAACCGCAGCC RPA4817 5442079 - 5441414 - | two-component transcriptional regulator RPA4818 5442417 - 5442079 - | hypothetical protein RPA4819 5442823 - 5442515 - | hypothetical protein TERM 3924 5442686 - 5442671 - G 74 -2.4 -4.72986 | overlap 5442673 CAGCGCCATCAAAAA CAGGCC GAGC GGACCG ACTTTGCCGACGAAG mtnA 5444131 - 5443007 - | methylthioribose-1-phosphate isomerase RPA4821 5445180 - 5444305 - | 5'-methylthioadenosine phosphorylase TERM 3925 5444926 - 5444881 - G 71 -12.5 -3.23395 | opp_overlap 5444863 5444860, overlap 5444867 5444863 5444909 5444911 ATCGACCAGCACGAA GGTGCCGGGCGGCAGCTCTTC CTTG AAAGAGCCGCAGGCCGACAGC GAGATCAGATCGGTG RPA4822 5445459 - 5446601 + | alcohol dehydrogenase RPA4823 5446767 - 5448317 + | acyl-CoA synthetase RPA4824 5448743 - 5448369 - | hypothetical protein RPA4825 5448815 - 5449168 + | MerR family transcriptional regulator recQ 5449244 - 5451094 + | DNA helicase TERM 3926 5451349 - 5451321 - g 71 -9.4 -3.77607 | opp_overlap 5451321 5451320, overlap 5451322 AAGAACGTGATGAAA GCCGCGCGCGCC CAGGC GGCGCGCGAAGG ACATTTGTCGAATTT RPA4827 5451162 - 5451389 + | hypothetical protein RPA4828 5451691 - 5451413 - | hypothetical protein TERM 3927 5451950 - 5451935 - H 70 -7.5 -3.97139 | GAACGCCAACAACAA CGCGC CAGCAC GCGCG GGACAAGGGGAGGAC caiC 5451971 - 5453557 + | putative crotonobetaine/carnitine-CoA ligase RPA4830 5454777 - 5453665 - | metal dependent phosphohydrolase domain-containing protein TERM 3928 5454731 - 5454719 - G 85 -10.5 -4.25056 | opp_overlap 5454708, overlap 5454670 GACGCCAGCAACAAA CGCCG GCG CGGCG CAGGGTTGGACGCAG RPA4831 5454965 - 5455354 + | hypothetical protein TERM 3929 5455728 - 5455754 + G 71 -3 -4.66537 | gap 2, overlap 5455711 ATCGACGCGGTGCAG GCCG-TGG-GCC CGGTC GGCATCATCGGC TTTTGTCTTGGCGGC clcD 5455410 - 5456081 + | putative dienelactone hydrolase RPA4833 5456749 - 5456108 - | polysaccharide export protein msrA2 5457541 - 5456885 - | methionine sulfoxide reductase A RPA4835 5458026 - 5457709 - | hypothetical protein rpsT 5458392 - 5458658 + | 30S ribosomal protein S20 SEQUENCE gi|39840937|ref|NC_005297.1| Rhodopseudomonas palustris CGA009 plasmid pRPA, complete sequence (length 8427) repA 1606 - 410 - | replication protein TERM 1 1412 - 1424 + g 70 -10.5 -3.65351 | GAGCGAAGCGTTTAG GCCGG TGT CCGGC TTTCCCTCAAGCTCA TERM 2 1977 - 1998 + r 70 -7.9 -4.09739 | gap 1, overlap 1978 TCCGGCGCCGCTTCT GGCGCG-GCC TTC GGCGCGCGCA TTTTCACAACCTTCG parA 2745 - 2092 - | partition protein TERM 3 2888 - 2855 - R 72 -11.9 -3.32343 | opp_overlap 2854 2857, overlap 2856 2865 2870 GTGATAGCGTCATAA TGCTATAGCATTACA GCGC CGTAATGCTATAGCG CTATAATGCTCAGGA TERM 4 2887 - 2856 - R 77 -15.4 -2.59191 | opp_overlap 2854 2857, overlap 2855 2865 2870 TGATAGCGTCATAAT GCTATAGCATTACA GCGC CGTAATGCTATAGC GCTATAATGCTCAGG endo 3968 - 2898 - | BsuBI-PstI family restriction endonuclease meth 5794 - 3965 - | restriction methylase res 6492 - 5935 - | resolvase pRPA6 6692 - 7318 + | hypothetical protein pRPA7 8030 - 7452 - | hypothetical protein