TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.670733 %AT, 901793 nt, 5048 terms. Intergenic: 0.69271 %AT, H2T: 231493 nt, 1694 terms; T2T: 63930 nt, 971 terms; H2H: 62861 nt, 984 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157825125|ref|NC_009881.1| Rickettsia akari str. Hartford, complete genome (length 1231060) A1C_00005 1 - 822 + | hypothetical protein A1C_00010 964 - 1383 + | thioredoxin A1C_00015 1389 - 2138 + | O-antigen export system ATP-binding protein RfbE TERM 1 2502 - 2515 + G 72 -2.4 -5.33124 | ATTTGTTCATTTTCG GCAA TGTATT TTGC TTTTATTTTATTATT A1C_00020 2139 - 2915 + | O-antigen export system permease protein RfbA A1C_00025 2912 - 5983 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase A1C_00030 6737 - 6021 - | UDP-N-acetylglucosamine acyltransferase fabZ 6814 - 6725 - | (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase A1C_00045 7261 - 6824 - | (3R)-hydroxymyristoyl-ACP dehydratase A1C_00040 6801 - 6926 + | hypothetical protein TERM 2 7135 - 7148 + gT 74 -5.3 -4.75372 | CTGTAAATTGCGGTT CGTTA ACAG TAACG TTTTTAATACCTAAT lpxD 8520 - 7480 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3 8748 - 8712 - H 72 -5.4 -4.82901 | CGGGGTCTATAAAAA CAATAAAAAATACTAA TAATT TTAGCATTTTTAACTG GATCCCGTGGTTAAG A1C_00055 8972 - 9427 + | esterase of the alpha-beta hydrolase superfamily protein TERM 4 9518 - 9535 + T 73 -8.5 -3.4382 | opp_overlap 9510 9512, overlap 9512 ATACTAATACATAGT GTACGAT AATC ATCGTAC TTAATGTTAGTTATT A1C_00060 9768 - 9637 - | hypothetical protein A1C_00065 12848 - 10272 - | clpB protein TERM 5 10483 - 10498 + g 79 -2.6 -5.81032 | AATTCAAGAATAATA TTTTGT TGTA GCAAAA TTTTTTTTAAGCTTC TERM 6 11753 - 11777 + g 72 -2.7 -5.33405 | opp_overlap 11753, overlap 11755 TCGCACTATCGGAAA TTCGCACTGCA TGA TGCAGCTCGTA TTTTTCTTTAATGCC TERM 7 13633 - 13691 + H 100 -15 -3.68538 | opp_overlap 13633, overlap 13634 ATCAATAAACAAAAT TAGAGAGCTTTGTTATTACTTTAGTATT GCC ATTGAAGAAGTAATAACAAAGCTCTCTA ATTTTGTTTATTGTT TERM 8 13691 - 13633 - H 93 -11.5 -3.65676 | gap 1, opp_overlap 13633 13634 ATCAATAAACAAAAT TAGAGAGCTTTGTTATTACTT-TAGTAT TGCC ATTGAAGAAGTAATAACAAAGCTCTCTA ATTTTGTTTATTGTT A1C_00080 14156 - 14263 + | hypothetical protein A1C_00085 14247 - 14372 + | hypothetical protein A1C_00090 14481 - 14696 + | hypothetical protein TERM 9 14777 - 14767 - g 72 -2.6 -5.46698 | TTTAAAATTAAAAAA TAAT GGT ATTA CGGTAGTTGCTAATT A1C_00095 14696 - 15421 + | acetoacetyl-CoA reductase A1C_00100 15625 - 16116 + | hypothetical protein TERM 10 16416 - 16406 - g 74 -4 -5.20781 | GATCAGAAAATAAAA TCAA TTT TTGA CAATTTAAAAAATCA TERM 11 17193 - 17179 - g 75 -2.8 -5.69262 | overlap 17180 GTATAAAAATAAAAA CCCTGA AAT TCAAGA AGCTGTAGCCTGTAT A1C_00105 16130 - 17452 + | hypothetical protein A1C_00110 17683 - 17907 + | hypothetical protein A1C_00115 17931 - 18044 + | hypothetical protein TERM 12 18504 - 18479 - T 80 -6.3 -4.87892 | opp_overlap 18479 TTTTAATAAAATAAA CAGATACAAAA CAAG TTTTTTATCTG TTTTACTAGATTCAC TERM 13 18479 - 18504 + T 72 -6.3 -4.30978 | opp_overlap 18479 TTTTAATAAAATAAA CAGATACAAAA CAAG TTTTTTATCTG TTTTACTAGATTCAC TERM 14 18577 - 18613 + T 88 -7.6 -4.96848 | opp_overlap 18587, overlap 18587 CTTGACCACAGGATC CAGTTAAAAATACTAA AATTA TTAGTATTTTTTATTG TTTTTATGTACCCCG TERM 15 18587 - 18603 + T 85 -3.8 -5.80727 | opp_overlap 18587, overlap 18577 GGATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTTTATTGTTTTT A1C_00120 18874 - 18710 - | cell surface antigen-like protein Sca10 A1C_00125 19340 - 18801 - | cell surface antigen-like protein Sca10 TERM 16 19099 - 19120 + gr 74 -8.9 -3.0644 | TAAGCATTATCTTTA TCTGTATTA TATC TAATACAGA TATTAGGCATTAAAT A1C_00130 19570 - 19433 - | cell surface antigen-like protein Sca10 A1C_00135 20153 - 19767 - | cell surface antigen-like protein Sca10 A1C_00140 20251 - 20529 + | hypothetical protein A1C_00145 20659 - 20543 - | hypothetical protein A1C_00150 21303 - 21109 - | cell surface antigen-like protein Sca10 TERM 17 21411 - 21439 + r 100 -9.9 -5.10208 | opp_overlap 21411 21417 GACTTGCACTATAAC CGTAAATATTAAT ATC ATTAATATTTATG TTTTTATTAAAATTA A1C_00155 21629 - 21471 - | cell surface antigen-like protein Sca10 TERM 18 22027 - 21991 - R 72 -5.4 -4.82901 | opp_overlap 22001, overlap 21994 22001 CGGGGTCTATAAAAA CAATAAAAAATACTAA TAATT TTAGTATTTTTAACCG TATCCAGTGCAAGCC TERM 19 22024 - 21994 - R 73 -5.7 -4.52873 | opp_overlap 22001, overlap 21991 22001 GGTCTATAAAAACAA TAAAAAATACTAA TAATT TTAGTATTTTTAA CCGTATCCAGTGCAA TERM 20 22017 - 22001 - R 85 -3.8 -5.80727 | opp_overlap 22001, overlap 21994 21991 AAAAACAATAAAAAA TACTAA TAATT TTAGTA TTTTTAACCGTATCC A1C_00160 22783 - 22115 - | hypothetical protein TERM 21 23208 - 23186 - g 90 -9.4 -4.27259 | opp_overlap 23177, overlap 23177 23179 CATATAGATTTAAAA TCATTTTTTA AAA TAAAAAATGA CGACATAACAACCCC A1C_00165 23018 - 23587 + | hypothetical protein A1C_00170 24173 - 23598 - | Sco2 protein precursor A1C_00175 24487 - 24720 + | hypothetical protein A1C_00180 24707 - 24823 + | hypothetical protein TERM 22 24917 - 24907 - f 93 -5.4 -6.06723 | CTTCTCAAAAAAAAA GTCT AAC AGAC AGTTCAAATATTTTA A1C_00185 25742 - 26197 + | hypothetical protein A1C_00190 26340 - 26573 + | hypothetical protein A1C_00195 26701 - 27369 + | hypothetical protein A1C_00200 27564 - 27875 + | folate synthesis bifunctional protein A1C_00205 28224 - 28364 + | dihydrofolate reductase TERM 23 29769 - 29759 - g 70 -4 -5.06016 | ATGAGAGAAATAAAA TTCT AGC AGAA GACATAAGAGATGAT recF 29260 - 30342 + | recombination protein F TERM 24 30412 - 30448 + F 100 -7.6 -5.81412 | opp_overlap 30422 TTTGATCGCGGGATC CAGTTAAAAATACTAA TGATT TTAGTATTTTTTATTG TTTTTTTTAGATACC TERM 25 31743 - 31731 - g 70 -6.3 -4.29049 | opp_overlap 31731, overlap 31728 CAAGTAGCAAAAGAA GCTTT TAA AAAGC TTGGTAAATATCAAC A1C_00225 30588 - 32192 + | hypothetical protein A1C_00230 32199 - 32345 + | hypothetical protein A1C_00235 32935 - 32402 - | transcriptional regulator TERM 26 33110 - 33122 + H 90 -6.3 -5.51353 | TATGCGAAGTATTTT TATCG TGC CGATA TTTTTATTATTTTTG A1C_00240 33114 - 34052 + | protein-disulfide isomerase A1C_00245 34211 - 34468 + | hypothetical protein TERM 27 34517 - 34504 - g 74 -3.9 -5.21709 | TTTGATATCAAAAAA TTGAT AGAC ATCAA AATGTTCGGTTTTGA TERM 28 35037 - 35047 + G 71 -6.8 -3.98716 | opp_overlap 35036 ATTAAAAGTAATAGC CGGT TTT ACCG TTTCATTAATGATTT A1C_00250 34465 - 35193 + | F0F1 ATP synthase subunit A A1C_00255 35388 - 35612 + | F0F1 ATP synthase subunit C A1C_00260 35630 - 36103 + | F0F1 ATP synthase subunit B' A1C_00265 36103 - 36597 + | F0F1 ATP synthase subunit B A1C_00270 36808 - 36698 - | hypothetical protein A1C_00275 37631 - 37122 - | TPR repeat-containing protein A1C_00280 42537 - 38026 - | cell surface antigen TERM 29 40199 - 40234 + g 72 -4.8 -4.77983 | opp_overlap 40210, overlap 40201 40228 TCACTTAATGCTGAT GCTTCTGATAATAACA AATT TGTTACTATCAGGGAC TTTTCTTGCTGTATT TERM 30 40584 - 40596 + g 84 -3.4 -5.75599 | opp_overlap 40584 TTGACGAAGTAAGAA CTAG TCCCT CTAG TTTTTTTATACTTTC TERM 31 40654 - 40665 + g 78 -2.2 -5.81622 | AACATGATTGCCAAT TTGC TCTT GCAG TTTTTTTAGTTTTGT TERM 32 41530 - 41541 + g 100 -5.8 -6.17033 | TATCTGTTTTTGTAG CCGT TGTA ACGG TTTTTTATTTTTTTT TERM 33 43174 - 43188 + H 70 -5 -4.65838 | AAATTATGGTAAATG GCAGAA TTA TTTTGC TTTTTAAACTCTATA A1C_00285 43287 - 43862 + | ComEC/Rec2 family protein A1C_00290 44125 - 44382 + | ComEC/Rec2-related protein TERM 34 44694 - 44664 - f 91 -10 -4.11295 | opp_overlap 44668, overlap 44688 44690 44691 CTAAAGCGAGATAAA TCGAGTATTTTAAA AGC TTTAAAATACTGGA TTCCCGCCTACGCGG TERM 35 44668 - 44690 + F 73 -9.4 -2.52896 | opp_overlap 44664 44688 AGCGAGATAAATCGA GTATTTTAAA AGC TTTAAAATAC TGGATTCCCGCCTAC A1C_00295 44786 - 45943 + | Poly(A) polymerase TERM 36 46036 - 46007 - g 86 -5.8 -5.47218 | gap 1, overlap 46011 46027 CGGGATCCAAAAAAA TG-GATACCGTGG TCAAG CCACGGTATAACA CCGGAAAGATTCTAA TERM 37 46031 - 46011 - g 84 -11.2 -2.99859 | overlap 46007 46027 ATCCAAAAAAATGGA TACCGTGG TCAAG CCACGGTA TAACACCGGAAAGAT A1C_00300 46006 - 46845 + | zinc/manganese ABC transporter substrate binding protein A1C_00305 46833 - 47348 + | hypothetical protein A1C_00310 47550 - 47353 - | antitoxin of toxin-antitoxin system StbD TERM 38 47614 - 47600 - R 76 -5 -5.11063 | AGCATGTAATAAAAA CCCATT TGC AATAGG CAGTAACTTTAATTC A1C_00315 48535 - 47579 - | hypothetical protein TERM 39 48136 - 48111 - G 76 -3.3 -5.40474 | overlap 48112 ATCTTTTTAAAAAAA TCTTCTTCAAA GCTT TTGGAAGAAGG ACACATATCAATCGT A1C_00320 49515 - 48532 - | nifR3 family TIM-barrel protein TERM 40 49753 - 49720 - R 88 -7.8 -4.91712 | gap 1, opp_overlap 49721 49730, overlap 49722 49730 GTCAATCCAGAAAAA GATTAAAAAATTCTG TAAAT CAGAATTTTTTAA-C TGGCTTGCTTCGTCG TERM 41 49752 - 49722 - R 100 -11.5 -4.07789 | opp_overlap 49721 49730, overlap 49720 49730 CAATCCAGAAAAAGA TTAAAAAATTCTG TAAAT CAGAATTTTTTAA CTGGCTTGCTTCGTC TERM 42 49730 - 49744 + r 72 -4.3 -5.10497 | opp_overlap 49722 49720 49730, overlap 49721 AAAAAGATTAAAAAA TTCTG TAAAT CAGAA TTTTTTAACTGGCTT TERM 43 49744 - 49730 - R 78 -4.3 -5.38348 | opp_overlap 49730 49721, overlap 49722 49720 AAAAAGATTAAAAAA TTCTG TAAAT CAGAA TTTTTTAACTGGCTT TERM 44 49768 - 49784 + r 72 -8.1 -3.31144 | overlap 49771 CTGGCTTGCTTCGTC GAATTAC TAC GTAATTC TTCTCGCAATGACGG A1C_00325 50449 - 50123 - | transposase IS200-family protein TERM 45 50250 - 50268 + g 78 -9.6 -3.24924 | opp_overlap 50250 50249 50246, overlap 50249 GATAAACTAAACAAC TCTCGGCT ATA AGCTGAGA TGTTATAAATAGAAG TERM 46 51426 - 51408 - g 78 -9.6 -3.24924 | opp_overlap 51408 51407 51403, overlap 51406 CTTCTATTTATAACA TCTCAGCT TAT AGCCGAGA GTTATGTGCTCCTTC A1C_00330 51227 - 51445 + | transposase IS200-family protein rpsF 51969 - 51835 - | 30S ribosomal protein S6 A1C_00340 52263 - 52691 + | 30S ribosomal protein S6 TERM 47 52795 - 52771 - g 80 -7.3 -4.57755 | AGGTAGGAGATAAAA CTGCTAAAAAA GTG TTTTTTAGAAG ACGTAAAGGATGCCC rpsR 52716 - 53003 + | 30S ribosomal protein S18 rplI 53015 - 53530 + | 50S ribosomal protein L9 TERM 48 53512 - 53531 + F 78 -4.4 -5.39721 | gap 1, opp_overlap 53512 TGAAACTTCAGAAGA TTTA-GCTG AGT CAGCATAAA TTTTTTCTATCGTCA TERM 49 54822 - 54808 - g 72 -5 -4.77036 | opp_overlap 54808 TTGTATCACGAAAAA TCAAGA AAA TCCTGA TTGTGTTATAACTTA A1C_00355 53771 - 55063 + | tRNA(Ile)-lysidine synthetase TilS TERM 50 56991 - 56976 - g 72 -2.6 -5.4433 | ACAGATAAAGAAAAA TTACCT GAAA AAGTAA AAACAAGTAAGGCTA A1C_00360 55116 - 57029 + | cell division protein ftsH A1C_00365 57126 - 57407 + | site-specific DNA methylase TERM 51 57499 - 57519 + F 82 -7.7 -4.41348 | opp_overlap 57504, overlap 57504 ATGGGGTACCGCAAG CAAGAGAAA TAG TTTCTTTTG TTTATTTACGAAAAG TERM 52 57504 - 57514 + F 75 -4 -5.18866 | opp_overlap 57504, overlap 57499 GTACCGCAAGCAAGA GAAA TAG TTTC TTTTGTTTATTTACG sdhB 57985 - 58125 + | succinate dehydrogenase iron-sulfur subunit A1C_00375 58505 - 58708 + | hypothetical protein A1C_00380 58740 - 59525 + | succinate dehydrogenase iron-sulfur subunit A1C_00385 59601 - 59813 + | hypothetical protein A1C_00390 61072 - 59948 - | hypothetical protein A1C_00395 61830 - 61051 - | prolipoprotein diacylglyceryl transferase TERM 53 62488 - 62504 + G 71 -6.7 -4.06611 | ACCGCTTAGCTTATA TTTTCAA ATA TTGAAAA TTATTGTTGTAGTTA A1C_00400 62087 - 63241 + | hypothetical protein TERM 54 63262 - 63295 + F 74 -9.2 -2.8785 | gap 1, opp_overlap 63258, overlap 63264 63266 CTGAAGTTAAATTTG TATACAAGATGGAAG CCGCA CTTC-ATCTTGTATA TATACTACTTGATTA TERM 55 64113 - 64099 - g 70 -4.3 -4.91084 | AAGAAAAGCGAAAAA TTTGC AGCAA GCAAA GTTGACTGGATAGGC TERM 56 64312 - 64295 - g 70 -7.1 -3.70546 | overlap 64265 64264 CCATTAAAAGCAGAA TTTTTGC CGGA GCAAAAA AAGTAGACTTACTGG TERM 57 64548 - 64538 - g 75 -2.6 -5.52384 | GTTCGATGAAAAAAA TAAA AAA TTTA CAACCGGAAATCGAT A1C_00405 63370 - 65052 + | putative inner membrane protein translocase component YidC A1C_00410 65052 - 65597 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase A1C_00415 65612 - 66172 + | hypothetical protein A1C_00420 66859 - 66476 - | hypothetical protein TERM 58 67028 - 66993 - H 72 -5.1 -4.84359 | gap 1, opp_overlap 67002, overlap 66996 67002 CCAGGTCCATAAAAA CAAT-AAAAATACTAA TAATT TTAGTATTTTTAACTG GATCCCGTGGTCAAA TERM 59 67024 - 66996 - H 100 -9.2 -4.52873 | opp_overlap 67002, overlap 66993 67002 GGTCCATAAAAACAA TAAAAATACTAA TAATT TTAGTATTTTTA ACTGGATCCCGTGGT TERM 60 67018 - 67002 - H 81 -3.8 -5.51353 | opp_overlap 67002, overlap 66996 66993 TAAAAACAATAAAAA TACTAA TAATT TTAGTA TTTTTAACTGGATCC A1C_00425 67369 - 67653 + | tellurite resistance protein-related protein A1C_00430 67847 - 67933 + | hypothetical protein TERM 61 68063 - 68091 + T 100 -9.2 -4.52873 | opp_overlap 68069, overlap 68069 ACCACTGGATCTAGT TAAAAATACTAA AATTA TTAGTATTTTTA TTATTTTTATGGACC TERM 62 68069 - 68085 + T 81 -3.8 -5.51353 | opp_overlap 68069, overlap 68063 GGATCTAGTTAAAAA TACTAA AATTA TTAGTA TTTTTATTATTTTTA A1C_00435 68674 - 68372 - | polypeptide deformylase TERM 63 69317 - 69301 - g 72 -5.9 -4.39889 | AGAACGATATGAAAA TAAGAAG TTT CTTCCTA TGGCGTTTATGATGT A1C_00440 69227 - 70723 + | ADP,ATP carrier protein A1C_00445 70807 - 72096 + | sugar phosphate permease ndk 72124 - 72546 + | nucleoside diphosphate kinase TERM 64 74126 - 74147 + G 72 -8.9 -2.62255 | opp_overlap 74126, overlap 74125 CTATGCTTAAAGAAA TGCAAAATA ATAA TATTTTGCA ATTACTCTATATTGA TERM 65 74147 - 74126 - g 89 -8.9 -4.42806 | opp_overlap 74126 74125 CTATGCTTAAAGAAA TGCAAAATA ATAA TATTTTGCA ATTACTCTATATTGA TERM 66 74160 - 74178 + G 71 -7.5 -3.40597 | opp_overlap 74164 74170, overlap 74155 74170 GCAATTACTCTATAT TGAAGCA AAATA TGCTTCA TATTTAACTAGACAA A1C_00455 72550 - 74418 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 67 74446 - 74424 - g 83 -9.4 -3.9392 | opp_overlap 74422, overlap 74421 TTTCACGTGAAATAA TTGAAAAATT AGA AATTTTTCAA AAGTTAGTTAAAAAA gidB 74402 - 74977 + | glucose-inhibited division protein B A1C_00465 74974 - 75741 + | soj protein A1C_00470 75728 - 76588 + | stage 0 sporulation protein J A1C_00475 76776 - 78443 + | putative ABC transporter ATP-binding protein A1C_00480 78446 - 78763 + | hypothetical protein A1C_00485 78798 - 79622 + | 2-dehydro-3-deoxyphosphooctonate aldolase A1C_00490 80008 - 80202 + | hypothetical protein A1C_00495 81298 - 80966 - | Iron-sulfur cluster assembly accessory protein TERM 68 81482 - 81459 - H 70 -4 -4.87892 | opp_overlap 81459 GTTTAATAAAATAAA TCTATAAAAA CAAG TTGTTATAGA TTTTACTGGATTTCC TERM 69 81643 - 81658 + G 73 -7.6 -3.72324 | AGAAACGAGTTTGAA TGCGAT CGTG ATCGCA TTATTAATACCAATG A1C_00500 81556 - 82731 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein argS 82718 - 84448 + | arginyl-tRNA synthetase A1C_00510 84595 - 85269 + | hypothetical protein A1C_00515 85287 - 85445 + | hypothetical protein TERM 70 85496 - 85510 + F 75 -4.3 -5.18357 | opp_overlap 85488 85496 GAATAATTAAACAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 71 85533 - 85549 + F 72 -8.1 -3.31792 | overlap 85536 CTGGATTGCTTCGTC GAATTAC TAC GTAATTC TTCTCGCAATGATGA A1C_00520 85586 - 87799 + | DNA topoisomerase IV subunit A TERM 72 87850 - 87886 + T 80 -8.9 -3.83318 | overlap 87851 ATATTTTATATTGTG TGATACAAGCGACTT ATCTATA AATTCGCTTGTATCG TTCTATTATTAAAAA TERM 73 87851 - 87885 + T 79 -10.2 -2.89509 | overlap 87850 TATTTTATATTGTGT GATACAAGCGACTT ATCTATA AATTCGCTTGTATC GTTCTATTATTAAAA A1C_00525 88105 - 87929 - | hypothetical protein TERM 74 88472 - 88482 + r 76 -2.6 -5.53288 | opp_overlap 88472 ATTTAAAGCATGTAA TATT GTA AATA TTTTTTTAAGTTGGA A1C_00530 88617 - 88459 - | hypothetical protein TERM 75 88706 - 88655 - R 93 -12 -3.10141 | gap 1, overlap 88648 88653 88660 AATACAAATCATATA TCACATGATTACCATATATTATGGT TGC AACACAATATATGGTAATCA-GAGA GCGTCAATATCTAAA TERM 76 88702 - 88660 - R 100 -16 -2.91086 | overlap 88648 88655 88653 AAATCATATATCACA TGATTACCATATATTATGGT TGC AACACAATATATGGTAATCA GAGAGCGTCAATATC TERM 77 88960 - 88915 - R 78 -10.5 -2.69798 | opp_overlap 88918, overlap 88914 88913 88958 AGATACAAGAAAATT TTTACTCTATGTCATTCCCGC ATTC GCGGGAATGACATAGAACTGG TTCCGCGAGCCATGC TERM 78 88918 - 88957 + r 100 -16.6 -2.70932 | opp_overlap 88915 88914 88913 TACAAGAAAATTTTT ACTCTATGTCATTCCCGC ATTC GCGGGAATGACATAGAAC TGGTTCCGCGAGCCA TERM 79 89039 - 89007 - R 91 -10.1 -4.30978 | opp_overlap 89007 TGGAATCCAGTAAAA GCCAAAAAATCTTGA TTT TAAAGATTTTTTAGC TTGGATCCCTGCTTT A1C_00535 90469 - 89150 - | putative surface antigen dcd 90754 - 91320 + | deoxycytidine triphosphate deaminase TERM 80 91311 - 91321 + F 78 -4 -5.36441 | AGGCGTAACTTTACC GTTA ACC TAAC TTTTTTATGTAAGAA A1C_00545 91529 - 91987 + | preprotein translocase subunit SecB A1C_00550 92212 - 92925 + | transcriptional activator protein CzcR queF 92929 - 93750 + | 7-cyano-7-deazaguanine reductase TERM 81 93854 - 93818 - T 70 -5.4 -4.57073 | opp_overlap 93828, overlap 93823 CACGGTGTTCAAAAA CAACTTAAAATACTAA TAGCT TTAGTATTTTAGACTG AATTCTGCCACAAGC A1C_00560 94644 - 94039 - | hypothetical protein A1C_00565 96095 - 94698 - | NAD(p) transhydrogenase subunit beta TERM 82 95884 - 95921 + g 81 -10 -3.02745 | overlap 95882 AGTGCAATAATCCTT CCGATTATAGCGCCTA ACAATA TGGTTGCTATAATCGG TAATTTATGAGTAAA A1C_00570 97022 - 96288 - | OmpW family outer-membrane protein A1C_00575 97178 - 98062 + | S-adenosylmethionine transporter TERM 83 98126 - 98150 + GT 75 -5.7 -4.71382 | TGTATTATTCGGTTA TTTTGCACCCA TAA TAGGAGCAAAA TTTTTCCCTAATTAT TERM 84 98178 - 98191 + GT 75 -2.4 -5.54079 | TATGATGCTAATACT GCTT TACTGC AAGC TTTTTTAGTTTTTGC secG 98392 - 98213 - | preprotein translocase subunit SecG A1C_00580 98049 - 99305 + | proline/betaine transporter TERM 85 99662 - 99652 - fH 70 -4 -4.92791 | overlap 99642 TACAAGATAATAAAA TGAT ATT ATCA TGCCAAACCAAAGAA A1C_00590 99721 - 99795 + | hypothetical protein A1C_00595 99977 - 100279 + | preprotein translocase subunit SecG TERM 86 100599 - 100579 - f 83 -10.5 -3.42658 | GATGACAAAACCGAA TCATGCAAC AAA GCTGCATGA CAATAATTCACACAA A1C_00600 100596 - 101300 + | hypothetical protein A1C_00605 106664 - 101331 - | 190 kDa antigen precursor TERM 87 105192 - 105213 + g 76 -3.7 -5.43974 | CTTCTTTAGTGCATC TACGAAAGG ATCA CCTTCTGTA TTTTTGTTTAATTTT TERM 88 106784 - 106743 - R 100 -9.1 -5.14163 | opp_overlap 106745, overlap 106745 106780 ATTTATCAAGAAAAA CATTATTTTTAATTTAACC TATT GGTTACATTAAAAATAATT GTTGCCATCAATTAG TERM 89 106782 - 106745 - R 100 -11.7 -4.19587 | opp_overlap 106745, overlap 106743 106780 TTATCAAGAAAAACA TTATTTTTAATTTAACC TATT GGTTACATTAAAAATAA TTGTTGCCATCAATT TERM 90 106745 - 106782 + r 95 -11.7 -3.6579 | opp_overlap 106745 106743 106780 TTATCAAGAAAAACA TTATTTTTAATTTAACC TATT GGTTACATTAAAAATAA TTGTTGCCATCAATT TERM 91 107145 - 107108 - R 76 -10.1 -2.78384 | gap 1, overlap 107113 TTGTGTTGCAGTATA CTCAACCACTAATAAGCT AAA ATCCTAT-AGTGGTTGAG TTACAAATTGACTTT A1C_00610 112578 - 107146 - | 190 kD antigen precursor TERM 92 110526 - 110510 - G 72 -8.7 -3.04144 | GGCGGATTTGGAATA CCACCAC TTA GTGGTAG AGGCGGCGGATTTGG TERM 93 110562 - 110546 - G 72 -8.7 -3.04144 | GGCGGATTTGGAATA CCACCAC TTA GTGGTAG AGGCGGCGGATTTGG TERM 94 110598 - 110582 - G 72 -8.7 -3.04144 | opp_overlap 110582 GGCGGATTTGGAATA CCACCAC TCA GTGGTAG AGGTGGTGGATTCGG TERM 95 110892 - 110919 + g 70 -4.3 -4.91511 | GTGATTGCATTTTAT TTTTTAACTCT AATTGC AGAGCTAAAAA TTTTTCTACTAGACT cysS 112799 - 114178 + | cysteinyl-tRNA synthetase rpsB 114515 - 115402 + | 30S ribosomal protein S2 TERM 96 115883 - 115893 + G 79 -6.8 -4.71426 | opp_overlap 115882 GTGGTTGAAGTCAAT TCCG AAA CGGA TTTTGTTGCTAGAAA TERM 97 116205 - 116186 - g 72 -5.8 -4.47679 | gap 1, overlap 116187 AATGCAAAAGATAAA GC-AAAGCT AGA AGCTTTAGC TAAACAAATTGCTGT tsf 115646 - 116575 + | elongation factor Ts A1C_00630 117250 - 117140 - | hypothetical protein A1C_00635 117897 - 117658 - | hypothetical protein A1C_00640 119250 - 117994 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 98 118128 - 118147 + g 73 -4.3 -5.00138 | GGAGATATGTTAGTT TGGTGAG TAAATC TTCACCA TTTTTGATTTGGATA A1C_00645 119903 - 119247 - | hypothetical protein A1C_00650 121220 - 120021 - | aspartate aminotransferase TERM 99 120814 - 120803 - G 78 -5.8 -4.91712 | CGCAATTTACAAAAA CAGG TGTA CCTG TGCTAAGTGCAACTA A1C_00655 121439 - 122443 + | hypothetical protein TERM 100 122851 - 122872 + G 70 -7.3 -3.68529 | opp_overlap 122850 122847 TTGCAGGTAAAGTAG GTTTGTCGT CTGA ACGTCAAAC TTTCGGTAGTACCCT A1C_00660 122448 - 123203 + | VacJ lipoprotein precursor A1C_00665 123223 - 123822 + | hypothetical protein A1C_00670 124305 - 124078 - | transposase IS200-family protein TERM 101 124106 - 124124 + g 78 -9.6 -3.24924 | opp_overlap 124105 124102 124106, overlap 124105 GAAATACTAAACAAC TCTCGGCT ATA AGCTGAGA TGTTATAAATAGAAG A1C_00675 124829 - 124984 + | hypothetical protein A1C_00680 124962 - 125144 + | hypothetical protein A1C_00685 125651 - 125514 - | hypothetical protein A1C_00690 126250 - 125999 - | esterase of the alpha-beta hydrolase superfamily protein A1C_00695 126399 - 126229 - | esterase of the alpha-beta hydrolase superfamily protein TERM 102 126540 - 126580 + r 82 -10.8 -2.76492 | gap 1, opp_overlap 126534 126536 126548, overlap 126540 126543 126548 AACAAGAAATATTAC TTAC-CGAATTATGGATAA ATCT TTATCCATAATTCGTGTCA ATTTAGAGTCAATAA TERM 103 126540 - 126581 + r 81 -9.2 -3.61178 | gap 2, opp_overlap 126534 126536 126548, overlap 126540 126543 126548 AACAAGAAATATTAC TT-AC-CGAATTATGGATAA ATCT TTATCCATAATTCGTGTCAA TTTAGAGTCAATAAC TERM 104 126543 - 126577 + r 100 -12.5 -2.65354 | gap 1, opp_overlap 126534 126536 126548, overlap 126540 126540 126548 AAGAAATATTACTTA C-CGAATTATGGATAA ATCT TTATCCATAATTCGTG TCAATTTAGAGTCAA TERM 105 126548 - 126571 + r 80 -9.8 -3.31196 | opp_overlap 126534 126536 126548, overlap 126543 126540 126540 ATATTACTTACCGAA TTATGGATAA ATCT TTATCCATAA TTCGTGTCAATTTAG TERM 106 126571 - 126548 - R 78 -9.8 -3.08642 | opp_overlap 126548 126543 126540 126540, overlap 126534 126536 ATATTACTTACCGAA TTATGGATAA ATCT TTATCCATAA TTCGTGTCAATTTAG A1C_00700 127080 - 126589 - | hypothetical protein TERM 107 127103 - 127131 + r 78 -10.5 -2.83715 | opp_overlap 127108 127119 127121, overlap 127105 CCTCTTTTTTATGTA GATTATTACCATG AAA CATGATAATAATC TATCATACTACTAAA A1C_00705 128330 - 127170 - | O-sialoglycoprotein endopeptidase TERM 108 127539 - 127527 - G 74 -7.7 -3.95555 | AGAATCATTTAGAAA GCTTG ATA CAAGC GAATTTTGCAGTTTT TERM 109 127803 - 127816 + g 74 -5.3 -4.85267 | opp_overlap 127803, overlap 127812 AGGTCCGCCAGGAAA TGCTA AGTT TAGCA TTTTTGCTACTTTGT TERM 110 128510 - 128536 + r 91 -9.6 -4.30978 | opp_overlap 128510 ATTTGACAAAATAAA CCTACAAAAACA AGT TTTTTTTGTAGG TTTTACTGCATTCCC TERM 111 128536 - 128510 - R 100 -9.6 -4.77775 | opp_overlap 128510 ATTTGACAAAATAAA CCTACAAAAACA AGT TTTTTTTGTAGG TTTTACTGCATTCCC A1C_00710 129836 - 128643 - | Acyl-CoA desaturase 1 A1C_00715 130177 - 130353 + | ribose-phosphate pyrophosphokinase alr 130548 - 130682 + | alanine racemase A1C_00725 130691 - 130849 + | hypothetical protein A1C_00730 130846 - 131913 + | alanine racemase TERM 112 131961 - 131978 + F 76 -9.9 -2.80622 | overlap 131951 ACGTTCAGGGTGTCA TTCCTGC TTTT GCAGGAA TCTAATAAAATATCT A1C_00735 132123 - 132902 + | ABC transporter permease protein TERM 113 133029 - 132995 - f 100 -13.2 -5.47218 | opp_overlap 133005 CGGTATGCAAAAAAA CAACTAAAAACACTAA ATA TTAGTGTTTTTAACTG GATCCTGCGATCAAG TERM 114 133005 - 133019 + F 81 -7.2 -4.67353 | opp_overlap 132995 AAAAACAACTAAAAA CACTAA ATA TTAGTG TTTTTAACTGGATCC TERM 115 133498 - 133488 - g 91 -4.6 -6.08342 | overlap 133491 TAAGAAAGAAAAAAA CGAC CTT GCCG GTGCAAAGCTTAATG TERM 116 133774 - 133757 - g 70 -4.2 -5.02074 | opp_overlap 133757 133759 TTAGTGCCGAAAAAA TAGCTA AAGAAG TAGCTA TGATTTATCAAGGAA A1C_00740 133135 - 133890 + | ribonucleotide ABC transporter ATP-binding protein A1C_00745 133892 - 134140 + | hypothetical protein rpmB 134219 - 134512 + | 50S ribosomal protein L28 A1C_00755 134509 - 134745 + | 50S ribosomal protein L31 A1C_00760 135384 - 136022 + | GTPase EngB A1C_00780 136910 - 137197 + | Type IV secretory pathway, VirB3-like protein TERM 117 137436 - 137448 + F 100 -9.1 -4.62069 | TGAGATTGCCGAGTC GAGGC TTA GCCTC TTTTTGCAATGACAA TERM 118 139608 - 139582 - g 71 -5.2 -4.59511 | overlap 139585 AAGATGCCGCAAAAA GTAGAATTAGTG ATA CATTAATTCAAC AAACAGCTACACAGA A1C_00785 137496 - 139913 + | Type IV secretion/conjugal transfer ATPase, VirB4 family protein TERM 119 140608 - 140594 - g 87 -2.8 -6.34616 | GGAAAATAAAAAAAA GGAATA TCA TGTTCC ATATAGCGGTAAGCC A1C_00790 140088 - 143114 + | TrbL/VirB6 plasmid conjugative transfer protein TERM 120 145052 - 145042 - g 74 -6.8 -4.323 | CGTAAAGATGGAAAA CAGC AAG GCTG GGATTCAGAAAGCGG A1C_00795 143101 - 145119 + | TrbL/VirB6 plasmid conjugative transfer protein A1C_00800 145126 - 148056 + | hypothetical protein TERM 121 149766 - 149752 - g 79 -8.6 -3.83675 | TAAGTTAATTAATAA TTCTGC AGT GCAGAA TATAGCTAAAGCTGC TERM 122 149876 - 149886 + G 80 -5.4 -5.26875 | opp_overlap 149876 149874 CGTATATGCAAAATA GCTA TAG TAGC TTTTTTAATTAGAGA A1C_00805 148265 - 150895 + | TrbL/VirB6 plasmid conjugative transfer protein A1C_00810 151083 - 154547 + | TrbL/VirB6 plasmid conjugative transfer protein A1C_00815 154665 - 154781 + | antitoxin of toxin-antitoxin system VapB TERM 123 154972 - 154942 - g 100 -10 -5.03715 | opp_overlap 154947 ATTACTGGCAAAAAA TAATACTATTGCTA TTT TATCAATAGTATTA GCAAAATTTCAATAT A1C_00820 154859 - 155110 + | toxin of toxin-antitoxin system A1C_00825 155369 - 156418 + | phosphate acetyltransferase A1C_00830 156420 - 157577 + | acetate kinase trmD 157903 - 158067 + | tRNA (guanine-N(1)-)-methyltransferase A1C_00840 158144 - 158848 + | tRNA (guanine-N(1)-)-methyltransferase rplS 158864 - 159280 + | 50S ribosomal protein L19 A1C_00850 159894 - 159658 - | hypothetical protein TERM 124 160050 - 160038 - H 75 -4.9 -5.08255 | ACCTCTAAAATAAAA TTCAA TTC TTGAA ATATCAGCAGTATAT secF 160092 - 161018 + | preprotein translocase subunit SecF A1C_00860 161250 - 162521 + | NADH dehydrogenase I subunit F A1C_00865 162646 - 163446 + | Signal peptidase I rnc 163446 - 164129 + | ribonuclease III era 164122 - 165003 + | GTP-binding protein Era TERM 125 165006 - 165037 + F 75 -7.3 -4.12226 | gap 1, opp_overlap 165006 165005, overlap 165004 TATGAAGATATGAAG CTGTCACCCCGTGG CTTGA CTACGGGGTC-CAG TATTTTTATAATTAT ruvC 165101 - 165574 + | Holliday junction resolvase A1C_00885 165571 - 166266 + | tRNA/rRNA methyltransferase TERM 126 166557 - 166543 - T 70 -5.8 -4.21408 | opp_overlap 166543 AAGTTCAAAAGTAAA TTCAAA ATC TTTGAA TTGTTGCGCCAATAT A1C_00890 166775 - 166641 - | nucleotidyltransferase A1C_00895 168132 - 166951 - | hypothetical protein A1C_00900 169091 - 168129 - | Mrp protein TERM 127 168360 - 168370 + g 70 -4 -5.09173 | AGAACGTATTACATC TATC TCT GATA TTTTTTGCGGTGTTG TERM 128 169237 - 169227 - g 74 -3.2 -5.44119 | TCGATTTTAAAAAAA TCCC CAT GGAA AGATTGTGATTCTAA A1C_00905 169191 - 170228 + | protease activity modulator HflK TERM 129 170261 - 170317 + G 80 -8.9 -3.58343 | TTGCGAGCAGCCGTA GGCTTG-CGCGGGCAATCTCATGAAAT AATAA AATTCCTGAGATTGCC-GCGTCGAGGC TTTACCCCTCCTCGC A1C_00910 170246 - 170395 + | hypothetical protein TERM 130 170537 - 170550 + G 74 -3.9 -5.14965 | overlap 170531 TTAAAATCCCATTTA TTCAA AATG TTGAA TTTTTTGATAAGCGT TERM 131 171168 - 171153 - g 75 -4.8 -5.00895 | GTTAGTATATAAAAA TTCTTT AAAG AAAGAA GATACTAATTTTGTG A1C_00915 170371 - 171231 + | membrane protease subunit stomatin/prohibitin-like protein TERM 132 171713 - 171682 - g 80 -7.5 -4.3341 | gap 1 TAAAATTAATATAAA GCTT-GCAGATAAT ACTGA ATTACCTGCTAAGC TAATAGGTAGCGATA TERM 133 172526 - 172504 - g 100 -9.4 -4.77438 | opp_overlap 172492 ATCTATTACTAAAAA TAATATTACT TTT AGTAATATTA CTGAAGCACTAAGAA A1C_00920 171236 - 172774 + | periplasmic serine protease A1C_00925 172853 - 173596 + | hypothetical protein A1C_00930 173782 - 174156 + | succinate dehydrogenase cytochrome b-556 subunit TERM 134 174386 - 174344 - g 100 -12.9 -3.87869 | gap 1, opp_overlap 174343 174344, overlap 174345 GTAAGGTTTTACAAA GTTTTTGGTGTCATTCCAGC GAAA GCGGGAATGACACCAATA-C AAAATATGTTTAGAG TERM 135 174386 - 174345 - g 100 -13.1 -2.924 | opp_overlap 174344 174343, overlap 174344 TAAGGTTTTACAAAG TTTTTGGTGTCATTCCAGC GAAA GCGGGAATGACACCAATAC AAAATATGTTTAGAG A1C_00935 174317 - 174409 + | hypothetical protein A1C_00940 174409 - 174786 + | succinate dehydrogenase hydrophobic membrane anchor protein A1C_00945 174783 - 174938 + | hypothetical protein A1C_00950 175024 - 175290 + | toxin of toxin-antitoxin (TA) system ParE sdhA 175325 - 177115 + | succinate dehydrogenase flavoprotein subunit TERM 136 177245 - 177229 - f 74 -8.1 -3.63515 | overlap 177232 CGTCATTGCTAAGAA GAATTAC GTA GTAATTC GAAGAAGCAATCCGG A1C_00960 177373 - 178029 + | amino acid ABC transporter permease protein rpsL 178187 - 178576 + | 30S ribosomal protein S12 A1C_00970 178603 - 179085 + | 30S ribosomal protein S7 TERM 137 180694 - 180674 - g 71 -7.7 -3.42459 | opp_overlap 180674 GATCTAGAAGATGAA GACAAAAAT AAA ACTTTTGTC TTTGCAAGTAAAATC A1C_00975 179099 - 181198 + | elongation factor G secE 181572 - 181778 + | preprotein translocase subunit SecE nusG 181789 - 182367 + | transcription antitermination protein NusG TERM 138 182376 - 182361 - f 74 -3.4 -5.38326 | opp_overlap 182361 CCAAGTAAAGAAAAA TAATTA AAAG TAATTA GATTTTTGTACTAAT rplK 182582 - 183019 + | 50S ribosomal protein L11 TERM 139 183264 - 183243 - g 70 -8.1 -3.05463 | ACGTGGTGTAGTTAA TTTACCTGC CGGT ACAGGTAAA ATCGTAAGAGTTGCC rplA 183025 - 183744 + | 50S ribosomal protein L1 rplJ 183846 - 184355 + | 50S ribosomal protein L10 rplL 184545 - 184919 + | 50S ribosomal protein L7/L12 TERM 140 185148 - 185179 + F 78 -3.1 -5.63517 | TTTAAAAGCTAAAAA GCCTTATTTTAGT AATGAA ATTCGAATAAGGC TTTTTTGTTTAAAAA TERM 141 189835 - 189856 + G 72 -7.3 -3.86916 | TGGTGAAAATAATTT TGAATCAGG TATT CCTGAATCA TTTAATGTGATGATA rpoB 185804 - 189925 + | DNA-directed RNA polymerase subunit beta TERM 142 192247 - 192226 - g 71 -6.7 -4.05678 | GCTTGAAATAAAAGA GTTTGAACA ACAA TATTCAAAC GGTTTAATTACTTAT A1C_01015 190244 - 194362 + | DNA-directed RNA polymerase subunit beta' TERM 143 194498 - 194512 + T 72 -4.3 -5.12916 | opp_overlap 194498 GATAACAGTAAAAAG TTCTG ATTGA CAGAA TTTTATTATTTTCTA TERM 144 194734 - 194760 + T 100 -16.8 -5.24551 | opp_overlap 194734 ATTATTGACAAAAAA GCCTACAAAAAC TAA GTTTTTGTAGGC TTTTTCTTAGTTTCG TERM 145 194760 - 194734 - T 100 -16.8 -5.28778 | opp_overlap 194734 ATTATTGACAAAAAA GCCTACAAAAAC TAA GTTTTTGTAGGC TTTTTCTTAGTTTCG A1C_01020 195817 - 194789 - | hypothetical protein TERM 146 195793 - 195779 - G 81 -10 -3.02147 | overlap 195774 GTGAAGACAAGCATA CCGCAT TGG ATGCGG CGTGAGGCTATAAAC TERM 147 196605 - 196617 + G 70 -4.1 -5.00884 | overlap 196604 AGTTAAAAAATTAAT TGCTG AGG CAGTA TTTTTTACAAGAGAT A1C_01025 196090 - 197574 + | leucyl aminopeptidase TERM 148 198040 - 198021 - g 72 -5.8 -4.36862 | overlap 198014 AGAGCAAACAAAGAA TTTTGAGC AGGT ACTCAAAA ATAATCCGGATTCCG A1C_01030 197755 - 198555 + | chromosome partitioning protein A1C_01035 198641 - 199075 + | hypothetical protein TERM 149 200382 - 200366 - g 90 -5.1 -5.8096 | overlap 200367 GATAAAAAAGAAAAA GCTGCAA GGC TTGCAGG TAAGGTTAGAATAAG TERM 150 200381 - 200367 - g 82 -8.6 -4.04916 | overlap 200366 ATAAAAAAGAAAAAG CTGCAA GGC TTGCAG GTAAGGTTAGAATAA TERM 151 200912 - 200900 - g 80 -7.7 -4.28188 | TATGTAGAAGATAAA GCTCT GAA AGAGC TCAGCATTATGCTAT aspS 199154 - 200962 + | aspartyl-tRNA synthetase A1C_01045 203342 - 201228 - | hypothetical protein TERM 152 201580 - 201600 + g 79 -3.3 -5.57888 | opp_overlap 201583, overlap 201581 TTCTTTATACCCTCA ATATCTTGC TCA GTAAGATAC TTTTCTTTTTTTAGT TERM 153 202845 - 202863 + g 91 -4.5 -5.92399 | opp_overlap 202844, overlap 202844 TTGAGCGACATAACC GGCAGAA ACTCC TGCTGCC TTTTTTCTTTTCTTC A1C_01050 204074 - 203364 - | integral membrane protein TERM 154 203788 - 203776 - G 73 -9.1 -2.95388 | TATGCAAGCGACATA CCGGT TAA ACCGG CATAAACCCAAAATA A1C_01055 204857 - 204120 - | dihydrodipicolinate reductase TERM 155 204364 - 204386 + g 75 -5 -5.09762 | overlap 204348 204365 CTTGGTCTGTTACCA CGATTAAATA CTA TATTTAATCC TTTTTCTCTTGCAAT TERM 156 204365 - 204385 + g 77 -8.5 -3.64773 | overlap 204348 204364 TTGGTCTGTTACCAC GATTAAATA CTA TATTTAATC CTTTTTCTCTTGCAA TERM 157 204794 - 204811 + g 86 -7.1 -4.7416 | opp_overlap 204793 AATCTTTAAATTTAT CTATTCT CGCT AGAATAG TTTTTCCCATTTTAC A1C_01060 205361 - 204876 - | hypothetical protein A1C_01065 206071 - 205346 - | amino acid ABC transporter substrate-binding protein gatB 207727 - 206276 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 158 206591 - 206617 + g 70 -7.4 -3.6914 | opp_overlap 206598 TAATTTTATTAGTTT TGCAAAGTCACT AGG AGTAATTTTGCA TTCATTTATTCCAAT gatA 209382 - 207904 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 209687 - 209385 - | aspartyl/glutamyl-tRNA amidotransferase subunit C frr 209989 - 209843 - | ribosome recycling factor A1C_01090 210804 - 210244 - | ribosome recycling factor TERM 159 210984 - 210935 - R 100 -13.2 -4.67038 | gap 2, overlap 210936 TTTTTAAAATCAAAA GCTCGCTTTATGCTGGATTCCCGC CTTC GCGGGAAT--AACATAAAGCGAGT CATGCAACAACACCA TERM 160 210983 - 210936 - R 100 -16.7 -3.395 | gap 2, overlap 210935 TTTTAAAATCAAAAG CTCGCTTTATGCTGGATTCCCGC CTTC GCGGGAAT--AACATAAAGCGAG TCATGCAACAACACC pyrH 211755 - 211018 - | uridylate kinase TERM 161 211340 - 211330 - G 85 -8.2 -4.37092 | ATCGGTTGTACAAAA CGGG TTA CCCG TACCACCGGCAAAAA A1C_01100 212076 - 211759 - | putative monovalent cation/H+ antiporter subunit E A1C_01105 213619 - 212060 - | multidrug resistance protein B TERM 162 213263 - 213232 - G 80 -5.2 -5.1286 | gap 1, opp_overlap 213232 GAAAAATTATAAAAA CGGTACTA-AAGACC GTT GGTATCATAGCACCG CCAAAAAATCCTTGT TERM 163 213578 - 213567 - G 83 -4.4 -5.59357 | opp_overlap 213567 ACCATACCAAAAAAA GCAA ACAA TTGC TTTTTAGAAAGGGCA TERM 164 213700 - 213690 - H 88 -4 -5.79595 | opp_overlap 213690 GTTTAAAATAAAAAA TTGT TGT ACAA CTTTTAATTTTTAAT A1C_01110 213859 - 214062 + | hypothetical protein TERM 165 215636 - 215618 - g 78 -9.6 -3.24924 | opp_overlap 215617 215613 215618, overlap 215616 CTTCTATTTATAACA TCTCAGCT TAT AGCCGAGA GTTGTTTAGTTATTC A1C_01115 215437 - 215658 + | transposase IS200-family protein A1C_01120 215813 - 215661 - | hypothetical protein TERM 166 216235 - 216219 - R 74 -8.1 -3.65046 | overlap 216222 TTGTCATTGCAAGAA GAATTAC ATA GTAATTC GACGAAGTAATCCAG A1C_01125 218673 - 216379 - | Outer membrane protein omp1 A1C_01130 220028 - 218955 - | membrane-associated zinc metalloprotease TERM 167 220123 - 220164 + H 78 -10.4 -2.82635 | gap 2, opp_overlap 220134 GCTATTGTTACTGTT TGG--TGATGTAATTCCCGC TTAG GCGGGAATGACATCAAGCCA TCTCATACTCACAAT TERM 168 220151 - 220134 - H 91 -11.3 -3.05384 | opp_overlap 220123 TGTTTGGTGATGTAA TTCCCGC TTAG GCGGGAA TGACATCAAGCCATC nusB 220211 - 220681 + | transcription antitermination protein NusB A1C_01140 220678 - 221361 + | ribosomal RNA large subunit methyltransferase J TERM 169 221359 - 221389 + T 93 -5.7 -5.95539 | opp_overlap 221359 GCTATAAATAAAAAA TAACATATATAAA TTTAC TATATATATGTTA TTTTTTTATTTAACA TERM 170 221389 - 221359 - T 93 -5.7 -5.72622 | opp_overlap 221359 GCTATAAATAAAAAA TAACATATATAAA TTTAC TATATATATGTTA TTTTTTTATTTAACA A1C_01145 222481 - 221399 - | hypothetical protein TERM 171 222478 - 222490 + g 74 -4.1 -5.24531 | TATTTATCGGTATTA CCATA AAA TGTGG TTTTTTCTAAAAAAT TERM 172 222577 - 222565 - H 72 -4.1 -5.03227 | opp_overlap 222565 ACATTATAAACAAAA CCATA AAA CATGG TAATTAAAAACAAGG TERM 173 222658 - 222629 - g 74 -9.5 -2.55544 | opp_overlap 222627 222629 222631 TTAGTACGTAATTTA TTCGTAAGTAATA AACC TATTACTTACGTA TCTTTAATAGCAAAA TERM 174 222629 - 222658 + G 80 -9.5 -3.44848 | opp_overlap 222629, overlap 222627 222631 TTAGTACGTAATTTA TTCGTAAGTAATA AACC TATTACTTACGTA TCTTTAATAGCAAAA TERM 175 222631 - 222656 + G 89 -12.1 -3.29704 | opp_overlap 222629, overlap 222629 222627 AGTACGTAATTTATT CGTAAGTAATA AACC TATTACTTACG TATCTTTAATAGCAA A1C_01150 222602 - 222763 + | hypothetical protein A1C_01155 222823 - 223554 + | hypothetical protein TERM 176 223577 - 223610 + T 100 -11.3 -4.93877 | opp_overlap 223581 223585, overlap 223579 ATACAAAATTTTCTA GAGAGTAATGTTATA GATC TATAACATTACTCTG TTTTATTTAATAACC TERM 177 223579 - 223608 + T 100 -13.9 -4.08958 | opp_overlap 223581 223585, overlap 223577 ACAAAATTTTCTAGA GAGTAATGTTATA GATC TATAACATTACTC TGTTTTATTTAATAA TERM 178 223606 - 223581 - T 83 -10.7 -2.89323 | opp_overlap 223579 223577, overlap 223585 AAAATTTTCTAGAGA GTAATGTTATA GATC TATAACATTAC TCTGTTTTATTTAAT A1C_01160 224053 - 223613 - | hypothetical protein A1C_01165 224318 - 224058 - | ABC-type multidrug transport system, ATPase and permease components TERM 179 225002 - 224977 - g 74 -8.5 -3.27029 | gap 1, opp_overlap 224994, overlap 224971 224975 224992 224994 GTTTAGGAAGTAATA TATTACGTGCTG AAA CAGCA-GTAATA ACTGCTATAGTACAA A1C_01170 224328 - 225092 + | hypothetical protein TERM 180 225099 - 225085 - T 91 -4.3 -6.04419 | opp_overlap 225085, overlap 225077 AAAATAATAAAAAAA TGCTA TAAAT TAGCA TTTTTTACTGGATTG TERM 181 225085 - 225099 + T 75 -4.3 -5.18357 | opp_overlap 225085 225077 AAAATAATAAAAAAA TGCTA TAAAT TAGCA TTTTTTACTGGATTG TERM 182 225122 - 225138 + T 73 -8.1 -3.44051 | overlap 225125 CTGGATTGCTTCGTC GAATTAC TGT GTAATTC TTCTCGTAATGACGA A1C_01180 225811 - 225716 - | hypothetical protein TERM 183 226851 - 226867 + H 75 -4.5 -5.10497 | TAAAAATCCATCATC TTTTTGT GGT ACGAAAA TTTTTTGAGTAAATT A1C_01205 227750 - 227869 + | hypothetical protein A1C_01215 228395 - 228276 - | hydrophobe/amphiphile efflux-1 HAE1 family protein A1C_01220 228997 - 229329 + | DNA-binding protein HU TERM 184 229345 - 229334 - f 71 -3 -5.26875 | CTTGTAATTAAAAAA GTAA CTTA TTAC AGTACTGATAGTTTC TERM 185 229432 - 229400 - g 89 -7.7 -4.95155 | GTGATACTAGAAAAA CCGGCTCATGCAA CAATGCT CTGCAAAAGCCGG AATGATATAGAACAA A1C_01225 229385 - 230263 + | DNA polymerase III subunit delta' TERM 186 230898 - 230883 - g 71 -9 -2.52676 | TAGGGCTGCAAGGGA GCGGTA AAAC TACCGC AAGTGGCAAGCTTGC A1C_01230 230546 - 231895 + | Signal recognition particle protein TERM 187 233421 - 233431 + F 81 -2.6 -5.75822 | TATATATTCTTTTGG TATT TCA AATA TTTTTTTGCTTTCTC TERM 188 234739 - 234723 - f 86 -7.3 -5.24551 | TGAAAGCAATAAAAA GCAAGAA ATG TCCTTGC ATGTATCATTTAGTA TERM 189 236012 - 236030 + G 71 -7.6 -3.46602 | opp_overlap 236011 236026, overlap 235992 235990 CATCTAAAAAATATT TTAGATAT GAG ATATCTAA TTATGCTCTAGCAAA A1C_01265 235282 - 236463 + | coproporphyrinogen III oxidase A1C_01270 236983 - 236630 - | hypothetical protein TERM 190 237313 - 237323 + r 76 -2.6 -5.53991 | opp_overlap 237313, overlap 237310 CGTCATATGGAGTAA TTAT ATT ATAA TTTTTTTGATCAATA A1C_01275 237829 - 237617 - | hypothetical protein A1C_01280 239424 - 238225 - | proton/sodium-glutamate symport protein TERM 191 239214 - 239204 - G 73 -4.6 -5.1101 | opp_overlap 239204 GTAGTACCTAAAAAA GCAG CTA CCGC TTTCATTCCTACTCT A1C_01285 239762 - 239448 - | periplasmic divalent cation tolerance protein A1C_01290 240208 - 239765 - | hypothetical protein A1C_01295 241520 - 240318 - | dihydrolipoamide acetyltransferase TERM 192 240852 - 240828 - G 71 -2.1 -5.4505 | TGCTTTAACAAAAAA CGACATAAAGC CAA GTTTCACATCG TGCTTTTTCTCGAAC kgd 244444 - 241658 - | alpha-ketoglutarate decarboxylase TERM 193 242666 - 242706 + g 74 -8.5 -3.2352 | gap 1, opp_overlap 242650 242654 242665 242668, overlap 242640 242684 CAAGCTTGCAAAAGC TAGCTGCTCAG-CTGTTG CCCAAT CAATAGGCTGATCAGCTA TTAGATTGGCTTTTC A1C_01305 246067 - 244580 - | thermostable carboxypeptidase TERM 194 245367 - 245392 + g 72 -2.5 -5.47218 | opp_overlap 245368, overlap 245368 245373 245375 GTTCCGCCGCAAAAA GGATGAGTCGA TTCG TCTAATCGTCC TTTTTTTAGATCAAA A1C_01310 247886 - 246246 - | DNA repair protein RecN TERM 195 247966 - 248002 + r 72 -4.8 -4.87665 | gap 1, opp_overlap 247976, overlap 247951 247969 CTTGACCACGGGGTC CAGTTT-AAAATACTAA GTTA TTAGTATTTTCAAGTTG TTTTTATGGATCACG A1C_01315 248814 - 248071 - | hypothetical protein TERM 196 248985 - 248970 - R 77 -9 -3.54653 | ATGCTTACCACAGAA GCGTAC ACTT GTACGC AAGGATTCGAGTACT TERM 197 249074 - 249089 + r 77 -4.8 -5.27923 | CTACCCAGTGTTCTT TATCAT TTTT ATGATA TTTTTTCTACGGTTG A1C_01320 249276 - 249082 - | cation transport regulator ChaB A1C_01325 250617 - 249502 - | DnaJ protein dnaK 252689 - 250806 - | molecular chaperone DnaK TERM 198 253083 - 253069 - g 74 -8.6 -3.19383 | overlap 253068 AAAAAGCGAAGAAAG CAATCG TAA CGATTG ATACTAGAATTGCTG TERM 199 254327 - 254294 - g 100 -12.7 -3.29461 | opp_overlap 254302 254304, overlap 254299 TAATTTCGGTTATAA TGAAATCATATCATC GCAT GATGATATGATTGCA GATGTAACTCTAGAT TERM 200 254322 - 254299 - g 93 -11.2 -3.9941 | opp_overlap 254302 254304, overlap 254294 TCGGTTATAATGAAA TCATATCATC GCAT GATGATATGA TTGCAGATGTAACTC A1C_01335 252930 - 254423 + | heat shock protease TERM 201 254581 - 254607 + F 100 -13 -2.81464 | ATACTGGAGTCATCA TTGCGAGCAGCC ATA GGCTGCGTGCAA TCTCATGAATAATAA A1C_01340 254761 - 255252 + | ankyrin repeat-containing protein TERM 202 255439 - 255391 - T 100 -20.1 -4.11838 | opp_overlap 255387 AAATTATTACACAAA CATCTTCCTTGCAAATCTAAT GCTCTAT ATTAAATTTGCAAGGAAGATG TAGAGAATTCTTTAA A1C_01345 255852 - 255508 - | hypothetical protein A1C_01350 256028 - 256501 + | hypothetical protein holA 256509 - 257489 + | DNA polymerase III subunit delta TERM 203 257577 - 257552 - f 78 -6.4 -4.77173 | opp_overlap 257552 TTTTGATAAAATAAA CATATAAAAA CTAAAT TTTTTATATG TTCTAATGGATTCCT A1C_01360 257689 - 258228 + | ubiquinone biosynthesis protein Coq7 A1C_01365 258414 - 258256 - | hypothetical protein A1C_01370 258912 - 259748 + | cytochrome c oxidase subunit III A1C_01375 259904 - 260263 + | hypothetical protein TERM 204 260321 - 260296 - T 100 -10.6 -4.61231 | opp_overlap 260296 TTATATCTTTAAAAA TACCCATAAG TTTCGG CTTATGGGTA TTTTTAAGTGACGTT TERM 205 260296 - 260321 + T 100 -11.3 -4.67011 | opp_overlap 260296 TTATATCTTTAAAAA TACCCATAAGT TTCG GCTTATGGGTA TTTTTAAGTGACGTT A1C_01380 261182 - 260562 - | hypothetical protein TERM 206 261325 - 261288 - g 85 -8 -4.49556 | gap 1, opp_overlap 261287 CTCTTATTAAAGAAA TTGAAGAAGCTTGGC AAATTAAGG GCCAA-CTTCTTCAA GATTCTTCAAAGCTT dapD 261266 - 262090 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase A1C_01390 262734 - 262627 - | hypothetical protein A1C_01395 263039 - 262758 - | hypothetical protein TERM 207 263491 - 263503 + r 74 -6.3 -4.49389 | overlap 263497 TTTGTACTATTGCTA TCTCT TCT AGAGA TTTTAGTTCTAGGGT A1C_01400 263791 - 263531 - | hypothetical protein A1C_01405 263982 - 263824 - | hypothetical protein A1C_01410 266579 - 264225 - | bifunctional penicillin-binding protein 1C TERM 208 264264 - 264278 + g 71 -8.6 -2.83641 | ACTGTCGTTTTCTCC GCTATC ACT GATAGC TCTAATAATAAATTC TERM 209 266631 - 266663 + H 76 -6.6 -4.4195 | opp_overlap 266588 266634, overlap 266595 266634 GGCGGGAAAGCCAGT AAAGTATATAAAAA ACTTA TTTTTATATACTTA TTTTATCAAATATGT TERM 210 266634 - 266660 + H 81 -8.3 -4.32067 | opp_overlap 266588 266634, overlap 266631 GGGAAAGCCAGTAAA GTATATAAAAA ACTTA TTTTTATATAC TTATTTTATCAAATA TERM 211 266660 - 266634 - H 77 -8.3 -3.82097 | opp_overlap 266631 266634, overlap 266588 GGGAAAGCCAGTAAA GTATATAAAAA ACTTA TTTTTATATAC TTATTTTATCAAATA A1C_01415 267090 - 267401 + | cell surface antigen-like protein Sca8 A1C_01420 267472 - 267561 + | hypothetical protein A1C_01425 267826 - 268143 + | hypothetical protein A1C_01430 268272 - 268595 + | hypothetical protein A1C_01435 268704 - 268790 + | hypothetical protein A1C_01440 268854 - 268961 + | hypothetical protein A1C_01445 269047 - 269262 + | cell surface antigen-like protein Sca8 A1C_01450 269373 - 269534 + | cell surface antigen-like protein Sca8 TERM 212 269567 - 269605 + T 100 -12.7 -3.1876 | opp_overlap 269559 269579 GAAGCGACGCGTTAG TCTAGTCAAAAATTCTG TAAAT CAGAAATTTTGACTGGA TTGCTGCGTCGAATT TERM 213 269616 - 269632 + T 73 -8.1 -3.51924 | overlap 269619 CTGGATTGCTGCGTC GAATTAC TAC GTAATTC TTCTCTCAATGACGG A1C_01455 270155 - 269709 - | universal stress protein UspA A1C_01460 271106 - 270165 - | hypothetical protein A1C_01465 272181 - 271111 - | hypothetical protein A1C_01470 272532 - 272194 - | ferredoxin hscA 274381 - 272594 - | chaperone protein HscA TERM 214 273823 - 273793 - G 81 -10.7 -2.89564 | opp_overlap 273798 273801, overlap 273798 273801 CGCCTAGGTCATATA CTAAATAACAACC TTTTT GGTTGTTATTTAA GCCGTAAGCATAGGC TERM 215 273798 - 273818 + g 73 -8.4 -3.55444 | opp_overlap 273793 273798 273801, overlap 273801 AGGTCATATACTAAA TAACAACC TTTTT GGTTGTTA TTTAAGCCGTAAGCA TERM 216 273818 - 273798 - G 77 -8.4 -3.88766 | opp_overlap 273798 273801, overlap 273793 273801 AGGTCATATACTAAA TAACAACC TTTTT GGTTGTTA TTTAAGCCGTAAGCA TERM 217 273894 - 273880 - G 72 -8.6 -3.11302 | overlap 273879 TTAATACTTCAAAAC CTGCTA TTT TAGCAG CAAGCATTACTTCGC hscB 274872 - 274372 - | co-chaperone HscB TERM 218 274607 - 274635 + g 73 -8.9 -2.94721 | overlap 274606 274609 ATGCTTAATTCTAGC GGCGAAAGTACAC TAC GTGTTTTTTCGTC ATTTAAATTTATATT rnhB 275014 - 275595 + | ribonuclease HII A1C_01490 277744 - 275759 - | excinuclease ABC subunit B A1C_01495 277815 - 278108 + | glutaredoxin 3 TERM 219 278140 - 278111 - f 89 -9.3 -4.23723 | gap 1 GAAGAGTATTTAAAA TGTCATCCCGCGGC TTG ACCGCGGGATC-CA AAACAATATACAAGC TERM 220 278809 - 278793 - f 73 -8.7 -3.17956 | AAAGTAGGGCATCAA GCAACCC GCT GAGTTGC TCTAAATGTCTTTAA TERM 221 280370 - 280360 - f 70 -4 -4.91712 | GGGAATCCAGAAAAA GTAT AAA ATAC AACAAATTTTTGAAA A1C_01525 280551 - 283247 + | DNA gyrase subunit A TERM 222 283527 - 283537 + T 78 -4 -5.42259 | GATTGTCGCGTCCAC TTAC TCT GTAA TTTTTTTCGCAATAA A1C_01530 284058 - 283783 - | hypothetical protein def 284970 - 285086 + | peptide deformylase A1C_01550 285238 - 285420 + | hypothetical protein A1C_01555 285662 - 285477 - | hypothetical protein A1C_01560 285876 - 286403 + | peptide deformylase TERM 223 286757 - 286745 - g 72 -9.1 -2.69151 | overlap 286742 CCTCGTCATAGAGGA GCAGC ACC GCTGC AGCGTACTATTATAG fmt 286415 - 287311 + | methionyl-tRNA formyltransferase A1C_01570 287428 - 287529 + | hypothetical protein A1C_01575 287754 - 287915 + | hypothetical protein TERM 224 290790 - 290778 - T 76 -9.1 -3.09933 | GCTGAATGCATCTAA GCAGG AAA CCTGC CTCAAAACTAGACTT TERM 225 291288 - 291300 + T 85 -7.7 -4.81734 | TAAGTCGCTGCCAAG CTTGC AAT GCAAG TTTTTAATCATCTTT A1C_01580 293501 - 292449 - | putative ATPase n2B TERM 226 292837 - 292858 + g 71 -3.1 -5.1361 | TGAGCAACAAGCTTA TTATCAC TAATCTCC GTGATAA TTTTTTCAAGTTTGT A1C_01585 294833 - 293718 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 227 294064 - 294093 + g 72 -5.9 -4.4874 | gap 1, opp_overlap 294064 GGAGTAATAGAGCAA TATTCAGTGTGCAT TTT ATGCTCA-TGAATA TTTTCGGTTTTTACA A1C_01590 295270 - 295749 + | hypothetical protein A1C_01595 295792 - 296037 + | hypothetical protein A1C_01600 298004 - 296235 - | multidrug ABC transporter ATP-binding protein TERM 228 297504 - 297494 - G 74 -5.4 -4.74132 | ATATCGTAGCAAAAA CGTA ATG TACG GAATATAAAGCAATG A1C_01605 298188 - 298469 + | hypothetical protein TERM 229 298527 - 298539 + F 78 -10.5 -2.78816 | TTTCGTCATTGTAAG CGGGC GTT GCCCG TGTGATACCAAATCG A1C_01610 298679 - 300034 + | cytochrome d ubiquinol oxidase subunit I TERM 230 300044 - 300064 + F 85 -11.2 -2.88249 | opp_overlap 300044 300046, overlap 300046 TTGTGATTTATATCA TACCGCGA CTTGA TCGCGGTA TCTATCAAAAATGTA TERM 231 300064 - 300044 - f 89 -11.9 -2.64616 | opp_overlap 300044 300046, overlap 300046 TTGTGATTTATATCA TACCGCGAC TTG ATCGCGGTA TCTATCAAAAATGTA TERM 232 300046 - 300062 + F 75 -9.4 -2.9914 | opp_overlap 300046 300044, overlap 300044 GTGATTTATATCATA CCGCGA CTTGA TCGCGG TATCTATCAAAAATG TERM 233 300062 - 300046 - f 76 -10.1 -2.8655 | opp_overlap 300044 300046, overlap 300044 GTGATTTATATCATA CCGCGAC TTG ATCGCGG TATCTATCAAAAATG A1C_01615 300129 - 301148 + | cytochrome d ubiquinol oxidase subunit II TERM 234 301828 - 301812 - g 100 -8.1 -5.55769 | TTGTATAATAAAAAA TTTGCAA GCT TTGCAAA TACCGTAAATAGTAC A1C_01620 301395 - 302270 + | beta 1,4 glucosyltransferase TERM 235 303396 - 303382 - g 72 -2.8 -5.39905 | ACGAAATAATAAAAA TGACTG AAA CAGTAA GTGCAGAAGAGATTA A1C_01625 302409 - 303647 + | mitochondrial protease TERM 236 303648 - 303675 + F 100 -17.2 -2.98823 | opp_overlap 303641 TTGAGAGAGGTTTAA TGTCATTCCTGC AAAA GCAGGAATGACA TATGTATCCACGCAG A1C_01630 303728 - 304438 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 237 304606 - 304622 + F 73 -3.8 -5.18715 | opp_overlap 304606, overlap 304601 GGATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTATTGTTTTTAT TERM 238 304665 - 304653 - f 76 -9.1 -3.18912 | opp_overlap 304652 304651 304654 GGACCTAGTTAGCAA GCCAC GGG GTGGC CATTGTGGTTTAATT A1C_01635 304742 - 306343 + | hypothetical protein TERM 239 306398 - 306365 - f 74 -7.5 -3.87815 | gap 1, overlap 306366 GTGCAGTGCGAGAAA TTGTCATCCCGTG-GT TTG ACTCACTGGATGACAG CGGATTGTTTAAGAA TERM 240 306397 - 306366 - f 83 -11 -2.92475 | gap 1, overlap 306365 TGCAGTGCGAGAAAT TGTCATCCCGTG-GT TTG ACTCACTGGATGACA GCGGATTGTTTAAGA thrS 306467 - 308374 + | threonyl-tRNA synthetase A1C_01645 308762 - 308878 + | ABC-type multidrug transport system, ATPase and permease components A1C_01650 309164 - 308967 - | hypothetical protein A1C_01655 309975 - 309568 - | hypothetical protein TERM 241 309855 - 309884 + g 88 -6.5 -5.48825 | opp_overlap 309858, overlap 309858 309870 CGTTTGGTGAATTAT CAATATTACCTCC TTCA GCAGGTAATATAG TTTTTTTACGTGCTG A1C_01660 310714 - 310589 - | hypothetical protein A1C_01665 311063 - 310788 - | hypothetical protein A1C_01670 311388 - 312752 + | TolC family type I secretion outer membrane protein A1C_01675 312754 - 313152 + | hypothetical protein A1C_01680 313215 - 315029 + | ankyrin repeat-containing protein TERM 242 316724 - 316710 - g 72 -2.8 -5.49579 | TTATAAAAAAGAAAA TTTGCG TTA CGAAAA AATAATTATTATGAC A1C_01685 315190 - 317178 + | DNA topoisomerase IV subunit B A1C_01690 317290 - 318639 + | tail-specific protease precursor TERM 243 319357 - 319367 + G 71 -5.4 -4.72497 | AGTGATTTAACAGTG GAAG AAG CTTC TTTTGTTACTAGCTA A1C_01695 318835 - 320328 + | histidine kinase sensor protein A1C_01700 320547 - 321284 + | hypothetical protein TERM 244 321919 - 321884 - g 76 -3.6 -5.32608 | gap 1, opp_overlap 321877 321894, overlap 321877 321893 321906 AAAAAATCTAAAAAA TTTATTAACTTCAGATA ATG TATCTGAT-CTAATAAA AGATCAGGCTAAAGC A1C_01705 321297 - 321959 + | hypothetical protein TERM 245 322201 - 322168 - g 89 -9.1 -4.45068 | gap 1, opp_overlap 322173, overlap 322154 322175 ATGCTTAAGAATAAA CAGT-ATAGTTTTGCT AGA AGCAAAACAATTACTG AGCCTATTTTTATAG TERM 246 322193 - 322175 - g 83 -10.4 -3.02508 | opp_overlap 322173, overlap 322168 AGAATAAACAGTATA GTTTTGCT AGA AGCAAAAC AATTACTGAGCCTAT A1C_01710 321982 - 323226 + | WD-40 repeat-containing protein rplM 323320 - 323787 + | 50S ribosomal protein L13 rpsI 323794 - 324279 + | 30S ribosomal protein S9 A1C_01725 324904 - 325011 + | hypothetical protein A1C_01730 325345 - 325476 + | putative pterin-4-alpha-carbinolamine dehydratase (PHS) A1C_01735 325911 - 326312 + | hypothetical protein A1C_01740 327136 - 326651 - | dinucleoside polyphosphate hydrolase pleD 328512 - 327160 - | response regulator PleD A1C_01750 328588 - 329154 + | elongation factor P TERM 247 329656 - 329646 - g 71 -3.2 -5.1287 | overlap 329632 TGCAGATTTAAAAAA CTGC TTA GCAA TTATTGAAGATGTAA A1C_01755 329164 - 329910 + | extragenic suppressor protein SuhB A1C_01760 330151 - 330474 + | hypothetical protein TERM 248 330530 - 330491 - f 71 -7.2 -3.70826 | overlap 330492 330505 TAAAAATAATGAGAA TCGCGAAGAGCAAATTAC TTAG GTAATCCACTATTCGCGT TAAGATGATTCATAG TERM 249 330529 - 330492 - f 82 -10.7 -2.80869 | overlap 330491 330505 AAAAATAATGAGAAT CGCGAAGAGCAAATTAC TTAG GTAATCCACTATTCGCG TTAAGATGATTCATA A1C_01765 330554 - 331249 + | phosphatidylserine decarboxylase TERM 250 331967 - 331977 + G 71 -5.4 -4.56607 | ATTAATATATATTTG GCTA TTA TAGC TTTTCTAATTGCTAG A1C_01770 331415 - 332182 + | CDP-diacylglycerol--serine O-phosphatidyltransferase A1C_01775 332191 - 333243 + | multidrug resistance protein A A1C_01780 333441 - 333518 + | hypothetical protein A1C_01785 333884 - 333681 - | hypothetical protein A1C_01790 334123 - 333881 - | hypothetical protein A1C_01795 334178 - 335395 + | hypothetical protein TERM 251 336155 - 336165 + G 74 -6.8 -4.27796 | overlap 336163 TTTATTACTAATTTG CCGT TTT ACGG TTTTGCCGTTTGTTG murC 335513 - 336949 + | UDP-N-acetylmuramate--L-alanine ligase murB 336996 - 337883 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 252 337917 - 337963 + F 100 -22.7 -3.36135 | opp_overlap 337887 337925 337931, overlap 337921 337931 GTCGTAGACTGCGTG GCAATCCAGTAAAACATGCTA ATCTA TCGCATGTTTTACTGGATTGC TTCGTTAAAACTTAT TERM 253 337921 - 337959 + F 100 -16.3 -3.45366 | opp_overlap 337887 337925 337931, overlap 337917 337931 TAGACTGCGTGGCAA TCCAGTAAAACATGCTA ATCTA TCGCATGTTTTACTGGA TTGCTTCGTTAAAAC TERM 254 337955 - 337925 - f 75 -9.9 -2.52464 | opp_overlap 337921 337917 337931, overlap 337931 CTGCGTGGCAATCCA GTAAAACATGCTA ATCTA TCGCATGTTTTAC TGGATTGCTTCGTTA ddl 338040 - 339002 + | D-alanine--D-alanine ligase TERM 255 339113 - 339091 - f 73 -3.5 -5.31456 | opp_overlap 339091 CTAATTTACAAAAAA GCAATATTA GGGCT TAAGATTGC TTTAATTATTTTTGT A1C_01815 339592 - 339801 + | cell division protein FtsQ TERM 256 339851 - 339881 + TF 81 -2.7 -5.66684 | opp_overlap 339859, overlap 339852 339859 CGACGAAGCAATCTA GTGAAGAATTCTG ATTTA CAGAATTTTTTAA TTTTTTTCTAGATTG TERM 257 339859 - 339873 + TF 82 -4.3 -5.62552 | opp_overlap 339859, overlap 339852 339851 CAATCTAGTGAAGAA TTCTG ATTTA CAGAA TTTTTTAATTTTTTT TERM 258 340135 - 340111 - gT 91 -7.9 -5.13473 | opp_overlap 340111 340110, overlap 340112 ATCAGATTTAAAAAA CGCTGAAACTA GCA TTGTTTCAGCA ATTTATGCACTTGAA TERM 259 340134 - 340112 - gT 81 -9.2 -3.66999 | opp_overlap 340111 340110, overlap 340111 TCAGATTTAAAAAAC GCTGAAACTA GCA TTGTTTCAGC AATTTATGCACTTGA A1C_01825 341310 - 341116 - | hypothetical protein A1C_01820 339950 - 341185 + | cell division protein FtsA A1C_01830 341710 - 341543 - | hypothetical protein TERM 260 341590 - 341623 + g 83 -11.1 -2.82742 | opp_overlap 341589 341587 341590, overlap 341587 341596 341601 GCCACAAGTTAACAT GCGCAAGATAATGCT TGTT AGCGTTCTCTTGTGC TAGTTCTAAAGAACT A1C_01835 342556 - 342230 - | hypothetical protein TERM 261 342482 - 342470 - G 88 -6.3 -5.38549 | CCCAAAGAATAAAAA TCCAA TAT TTGGA ACTGCAAAAAATTCA A1C_01840 343073 - 342546 - | cytochrome c TERM 262 343823 - 343809 - g 73 -4.4 -5.00611 | GAGAAATAAAAGAAA TATTTA AAT TAAATA TAAATGAAGAATATA A1C_01845 343187 - 344257 + | hypothetical protein lpxC 345132 - 344266 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase A1C_01855 346533 - 345385 - | hypothetical protein A1C_01860 346962 - 349034 + | ribonuclease E A1C_01865 349210 - 350166 + | cytochrome c oxidase assembly protein TERM 263 350292 - 350234 - f 100 -26.5 -3.3903 | opp_overlap 350238 350242 350256, overlap 350238 350256 CAAGGAGCGAAGCAA CGCAGCAATCCAGTGATACAAATTCTG TAAAT CAGAATTTGTATCACTGGATTGCTTAG TCAAAATTTTCAATT TERM 264 350238 - 350288 + F 100 -30.3 -3.18429 | opp_overlap 350234 350238 350256, overlap 350242 350256 GAGCGAAGCAACGCA GCAATCCAGTGATACAAATTCTG TAAAT CAGAATTTGTATCACTGGATTGC TTAGTCAAAATTTTC TERM 265 350288 - 350238 - f 100 -30.3 -2.6072 | opp_overlap 350238 350242 350256, overlap 350234 350256 GAGCGAAGCAACGCA GCAATCCAGTGATACAAATTCTG TAAAT CAGAATTTGTATCACTGGATTGC TTAGTCAAAATTTTC TERM 266 350242 - 350284 + F 100 -23.9 -3.40073 | opp_overlap 350238 350234 350256, overlap 350238 350256 GAAGCAACGCAGCAA TCCAGTGATACAAATTCTG TAAAT CAGAATTTGTATCACTGGA TTGCTTAGTCAAAAT A1C_01870 350364 - 351275 + | ribosomal large subunit pseudouridine synthase C A1C_01875 351424 - 352617 + | penicillin-binding protein 4* A1C_01880 352631 - 353464 + | exodeoxyribonuclease III TERM 267 353477 - 353445 - f 93 -11.4 -3.56042 | opp_overlap 353444, overlap 353443 353441 GCATCCAAAAACAGA TGTCATCCAGTGGC TCTTG ACCACTGGATGAAA ATATACTATAGGAGT A1C_01885 353506 - 354486 + | pyruvate dehydrogenase e1 component, alpha subunit precursor TERM 268 355359 - 355348 - g 74 -3 -5.41746 | opp_overlap 355348 AATCGGTGAAAAAAA CTAA TCGT TTAG TTGTAGTAGAAGAAG A1C_01890 354594 - 355574 + | pyruvate dehydrogenase subunit beta A1C_01895 357591 - 355762 - | GTP-binding protein TypA A1C_01900 357791 - 357955 + | hypothetical protein A1C_01905 357948 - 358127 + | hypothetical protein A1C_01910 358096 - 358377 + | hypothetical protein TERM 269 359105 - 359094 - g 70 -4.4 -4.90302 | GATTAAGAAAACAAA GCTT GAAC AAGC ACACGCTGAGGCTAT A1C_01915 358789 - 359295 + | hypothetical protein A1C_01920 359376 - 360827 + | isocitrate dehydrogenase A1C_01925 360985 - 361329 + | putative monovalent cation/H+ antiporter subunit G TERM 270 361916 - 361932 + G 75 -9.4 -2.87132 | CAGGAGGGTGTCATC CCGTGG CTTGA CCACGG TATCTCAGGACACGG A1C_01930 361364 - 362410 + | putative monovalent cation/H+ antiporter subunit B A1C_01935 362533 - 363171 + | Heme exporter protein B A1C_01940 363248 - 363706 + | hypothetical protein A1C_01945 363728 - 364261 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit A1C_01950 364268 - 365611 + | cytochrome b TERM 271 365719 - 365729 + F 72 -4 -5.08601 | GGATTGCTTCGTCAA TTAC TTC GTAA TTTTTCTTGCAATGA TERM 272 365907 - 365883 - g 71 -8.7 -2.89081 | overlap 365882 365885 TAGCCAACGAAGAAG CATTACATCCT AAA AAGATGCAATG GTCGTTTGATGGCGT TERM 273 366508 - 366523 + G 70 -4 -5.10968 | AGTTATGATGTTTTT GGTAGT GTTT ACTATC TTTTTCTATATTGCT A1C_01955 365813 - 366568 + | cytochrome c1, heme protein precursor TERM 274 366932 - 366906 - g 70 -7.4 -3.72324 | TACTTGCAGTAATAA CAGGATTTATTA GTT CAATAATTCCTG AAATTTTAAAAATGT A1C_01960 366881 - 367054 + | hypothetical protein TERM 275 367714 - 367703 - g 81 -4.4 -5.47846 | overlap 367707 AAGCAAAAAATAAAA CTGA TTAT TCAG ATAATTATATGAATA A1C_01965 367381 - 367872 + | heat shock protein TERM 276 368503 - 368515 + T 72 -6.3 -4.33417 | opp_overlap 368503, overlap 368499 ACATTCCTTGACCAA CCATT TTC AATGG TTTGTTGTGCATACC TERM 277 368601 - 368581 - T 79 -8.4 -3.90291 | opp_overlap 368581 ATGCCCCCAAGGAAA TTCTCCAA CAGAC TTGGAGAA TTTGTTCATCGTTAT TERM 278 368581 - 368601 + T 81 -8.4 -4.29829 | opp_overlap 368581 ATGCCCCCAAGGAAA TTCTCCAA CAGAC TTGGAGAA TTTGTTCATCGTTAT prfB 369752 - 368895 - | peptide chain release factor 2 A1C_01975 370172 - 371974 + | GTP-binding protein LepA TERM 279 372466 - 372456 - f 71 -6.8 -3.87869 | TTAAGCGGCTACAAA GTCG GTA CGAC TCACCAAATGCCAGT A1C_01980 372474 - 372656 + | putative phage-related protein A1C_01985 372936 - 372781 - | hypothetical protein A1C_01990 373019 - 373216 + | transposase IS200-family protein TERM 280 373195 - 373222 + T 84 -8.6 -4.22226 | gap 1, opp_overlap 373198 373200, overlap 373200 TTACACTTCTATTTA TAACATCTCAGCT TAT AGCTGAGA-GTTG TTTAGTTTATGTTAT TERM 281 373219 - 373198 - T 72 -8.1 -3.35996 | gap 1, opp_overlap 373195 373200, overlap 373200 CACTTCTATTTATAA CATCTCAGCT TAT AGCTGAGA-G TTGTTTAGTTTATGT TERM 282 373218 - 373200 - T 95 -11.8 -3.24924 | opp_overlap 373195 373200, overlap 373198 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTTATG TERM 283 373200 - 373218 + T 93 -11.8 -3.10121 | opp_overlap 373200 373198, overlap 373195 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTTATG A1C_01995 374351 - 373251 - | rod shape-determining protein RodA TERM 284 374412 - 374453 + r 87 -11.1 -3.38314 | gap 1, opp_overlap 374449, overlap 374411 CAAGTCTTGTTTATG TTTTTTTG-GATCCCGCGAT CAA GTCGCGGGATTACAATAAAA TCTTTAAACCTTCAC A1C_02000 376511 - 374457 - | protease II TERM 285 375679 - 375697 + g 80 -5.4 -5.18371 | overlap 375681 AAATAATCGCCATTA TGTTCTAT GTC ATAGAATA TTTTATTTTCTGCGG A1C_02005 378075 - 376543 - | putative monovalent cation/H+ antiporter subunit D TERM 286 377487 - 377473 - G 75 -5 -5.09173 | TAATATTCCAAAAAA CTTAAG TAT CTCAAG ACCGCTAAATAATTT A1C_02010 378271 - 378077 - | toxin of toxin-antitoxin system VapC TERM 287 378314 - 378332 + rH 74 -6.1 -4.49389 | opp_overlap 378314 378313 ATATGCGATAAAAAC TAAACGT TTAAT ACGTTTA TTTTCATTATCGGCT A1C_02015 380276 - 378813 - | putative monovalent cation/H+ antiporter subunit D A1C_02020 380191 - 380295 + | putative monovalent cation/H+ antiporter subunit D TERM 288 380387 - 380401 + Tr 72 -4.3 -5.01823 | opp_overlap 380387 CAATCAAGTACACAA TTCTG TAAAT CAGAA TTTTATTGTTGTTCT A1C_02025 381597 - 380497 - | putative monovalent cation/H+ antiporter subunit D A1C_02030 381653 - 381796 + | putative monovalent cation/H+ antiporter subunit C A1C_02035 382115 - 381780 - | putative monovalent cation/H+ antiporter subunit C A1C_02040 383046 - 382294 - | VirB9 protein A1C_02045 383746 - 383048 - | VirB8 protein TERM 289 384112 - 384127 + H 81 -4.8 -5.41143 | TTTTTAATATTTTTT TCTATT TATA AATAGA TTTTTTTAAAAAATG A1C_02050 384210 - 384389 + | hypothetical protein A1C_02055 384440 - 385171 + | VirB8 protein A1C_02060 385158 - 385634 + | VirB9 protein precursor TERM 290 385674 - 385718 + F 81 -9.4 -3.59979 | gap 1, overlap 385678 385683 GACTTGTCCGCACTG CTCGTCTTATGTCATTCCCGC GTAG GCGGGAATGACATCTGGT-AG TTTGCGATCCACGCG TERM 291 385678 - 385715 + F 100 -13.5 -2.92613 | overlap 385674 385683 TGTCCGCACTGCTCG TCTTATGTCATTCCCGC GTAG GCGGGAATGACATCTGG TAGTTTGCGATCCAC TERM 292 385683 - 385710 + F 100 -18.6 -2.8934 | overlap 385678 385674 GCACTGCTCGTCTTA TGTCATTCCCGC GTAG GCGGGAATGACA TCTGGTAGTTTGCGA A1C_02065 385779 - 387233 + | virB10 protein A1C_02070 387230 - 388234 + | VirB11 protein TERM 293 388472 - 388495 + G 74 -6.8 -4.25615 | overlap 388492 CCGGTTGTTATTTTT TGTACCATTT GGCT AAGTGGTGCA TTTGTTGCAATTTTT A1C_02075 388397 - 390172 + | virD4 protein TERM 294 390654 - 390666 + G 74 -6.3 -4.35461 | opp_overlap 390654 390652 TCGGTACAAAAATTA TTGCT AGT AGCAA TTTTGGTGATGTTGG A1C_02080 390182 - 391594 + | guanosine pentaphosphate phosphohydrolase TERM 295 391687 - 391662 - f 100 -11.9 -3.88232 | overlap 391664 CGGTCTACACAATAA GACATTCCTGC TTTT GCAGGAATGAC ATCGAAATCTTTTTA TERM 296 391685 - 391664 - f 100 -13.1 -3.52874 | overlap 391662 GTCTACACAATAAGA CATTCCTGC TTTT GCAGGAATG ACATCGAAATCTTTT A1C_02105 393376 - 393597 + | cell surface antigen-like protein Sca7 A1C_02110 393606 - 393824 + | cell surface antigen-like protein Sca7 A1C_02115 393836 - 394366 + | cell surface antigen-like protein Sca7 A1C_02120 394596 - 394814 + | cell surface antigen-like protein Sca7 A1C_02125 394811 - 394873 + | hypothetical protein A1C_02130 395226 - 395540 + | protein transport protein sec7 (sec7) A1C_02135 395825 - 396022 + | transposase IS200-family protein TERM 297 396001 - 396028 + F 80 -8.6 -3.73224 | gap 1, opp_overlap 396004 396006, overlap 396005 396006 TTACACTTCTATTTA TAACATCTCAGCT TAT AGCTGAGA-GTTG TTTAGTGAACGGTAA TERM 298 396025 - 396004 - f 72 -8.1 -3.35996 | gap 1, opp_overlap 396001 396005 396006, overlap 396006 CACTTCTATTTATAA CATCTCAGCT TAT AGCTGAGA-G TTGTTTAGTGAACGG TERM 299 396005 - 396025 + F 79 -8.3 -4.00042 | opp_overlap 396004 396006, overlap 396001 396006 ACTTCTATTTATAAC ATCTCAGCT TAT AGCTGAGAG TTGTTTAGTGAACGG TERM 300 396006 - 396024 + F 90 -11.8 -2.99704 | opp_overlap 396004 396006, overlap 396005 396001 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTGAACG TERM 301 396024 - 396006 - f 95 -11.8 -3.24924 | opp_overlap 396006 396005 396001, overlap 396004 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTGAACG A1C_02140 396033 - 396242 + | cell surface antigen-like protein Sca7 A1C_02145 396274 - 396501 + | cell surface antigen-like protein Sca7 A1C_02150 396501 - 397385 + | cell surface antigen Sca3 A1C_02155 397600 - 397382 - | hypothetical protein TERM 302 397997 - 398007 + H 75 -4 -5.26907 | AAGTTTTAAAGAATC TATC ACG GATA TTTTATTTTCTGTTA A1C_02160 398228 - 398338 + | transposase A1C_02165 398406 - 398684 + | transposase TERM 303 400654 - 400637 - T 71 -5.7 -4.43221 | opp_overlap 400637 400635 AAACATTGGATAAAA CATAATT GTTA AATTATG TCTTTTAATCTCTAT A1C_02180 401062 - 400901 - | hypothetical protein A1C_02185 401297 - 401064 - | hypothetical protein TERM 304 401483 - 401503 + r 81 -5.6 -5.28481 | opp_overlap 401486 TATGTTCTATCTATT TAATTTGA TCTGC TCAAATTA TTTTTTCGTTAACTC A1C_02190 401744 - 401496 - | hypothetical protein TERM 305 402366 - 402346 - g 71 -9.1 -2.54015 | opp_overlap 402343, overlap 402343 402348 AAATCCCTATAATAG CAGTAAATC ATG GATTTACCG GTAATTTTAATAATA TERM 306 402586 - 402601 + G 74 -6.2 -4.51097 | TCCTTATTTACATGG GCTTTA TGCC TAAAGC TTTTATAATAATTAG A1C_02195 401964 - 402851 + | hypothetical protein TERM 307 402862 - 402845 - g 78 -5.7 -4.91109 | opp_overlap 402844 TCCTTATGATAAAAA TCAATAA AGTG TTATTGA GCTTACTTTGCTTAG A1C_02200 402835 - 403680 + | hypothetical protein A1C_02205 403977 - 404756 + | cysQ protein A1C_02210 407529 - 404869 - | DNA mismatch repair protein TERM 308 405119 - 405096 - G 85 -11 -3.28924 | CAGCTCTGTTTATAA CGCTAGCAGG GAGT CCTGCTAGAG CTGCAACATGAATAC TERM 309 405872 - 405882 + g 71 -5.4 -4.60255 | opp_overlap 405881, overlap 405881 TGGCTACAAATATCG GCAT ATA ATGC TTTTTCCAAGCTTAT TERM 310 406821 - 406844 + g 81 -4 -5.59564 | TTCCTTTAATATCTT TCATTTTATA AAAG TCTAAAATGA TTTTTTTGCATTTAT A1C_02215 408062 - 408226 + | hypothetical protein TERM 311 409402 - 409431 + T 70 -8.1 -3.15579 | overlap 409399 TTGTTACTCCTTCAA TTGCAGAAATT GTTGTATA AATTTCTGCAA TTACTAGAGGATTAA A1C_02230 409987 - 409553 - | ribose-5-phosphate isomerase B TERM 312 410391 - 410381 - g 71 -6.8 -4.12942 | opp_overlap 410381 TCAAACTTTGTAAAA CCGT TAA ACGG TGTAATGCTTACCGA A1C_02235 410030 - 410707 + | membrane proteins related to metalloendopeptidase A1C_02250 411429 - 411554 + | antitoxin of toxin-antitoxin stability system A1C_02255 411695 - 411853 + | toxin of toxin-antitoxin system thyX 411948 - 412832 + | FAD-dependent thymidylate synthase TERM 313 413469 - 413451 - g 77 -4.5 -5.19261 | opp_overlap 413454 413467, overlap 413454 AAATTTATGAAAAAA TTACCGG TGATG CCGGTTA TTTTGACACCAAAAT TERM 314 413454 - 413466 + G 74 -6.9 -4.17048 | opp_overlap 413451 413454 TTTATGAAAAAATTA CCGGT GAT GCCGG TTATTTTGACACCAA tolB 412988 - 414322 + | translocation protein TolB TERM 315 414354 - 414398 + T 100 -14.6 -4.72846 | gap 1, overlap 414355 414357 GCATTGTTACGTGGA TC-ATTTTATGTCATTCCCGC TTCC GCGGGGATGACATAAAGTAGG TTTTTCGATCTATGC TERM 316 414355 - 414397 + T 100 -15.9 -3.42985 | gap 1, overlap 414354 414357 CATTGTTACGTGGAT C-ATTTTATGTCATTCCCGC TTCC GCGGGGATGACATAAAGTAG GTTTTTCGATCTATG TERM 317 414357 - 414394 + T 100 -18.7 -2.85763 | overlap 414355 414354 TTGTTACGTGGATCA TTTTATGTCATTCCCGC TTCC GCGGGGATGACATAAAG TAGGTTTTTCGATCT A1C_02270 415339 - 414458 - | RNA polymerase factor sigma-32 A1C_02275 415425 - 415970 + | cytochrome C oxidase assembly protein A1C_02280 417160 - 416183 - | hypothetical protein TERM 318 417267 - 417224 - H 79 -6 -5.11613 | opp_overlap 417224 417226 417237, overlap 417226 ATATGAGCGAAAAAA CTGTGCGATATCATTCCCGC GTAA GCTGGAATAATATCGGAGTG TTAATCAATCTTACC TERM 319 418163 - 418189 + G 86 -10.2 -3.61902 | overlap 418178 ATAGGGCAACGTCGT GGGCTTGGTATA GCT TATAACGAGCCC TTATATGTAGTAAAG TERM 320 418329 - 418318 - g 81 -4.4 -5.33331 | TAAAGATAACAAAAA GCTA GAAG TAGC CGTTAAAATCCGCTC trmU 417410 - 418507 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 321 419666 - 419676 + G 74 -5.4 -4.77165 | CTTCTTTATCCGCTA TCCT TGG AGGA TTTTGTTCTACGGAA A1C_02290 418585 - 419976 + | cationic amino acid transporter-1 TERM 322 420004 - 420025 + F 90 -7.3 -5.62552 | TCAGTGTCATCACGC GACTTGATC GTGG GATCCAGTC TTTTTTAATTTTTTT hisS 420129 - 421376 + | histidyl-tRNA synthetase A1C_02300 421440 - 421802 + | ABC transporter ATP-binding protein A1C_02305 421888 - 422103 + | ABC transporter ATP-binding protein TERM 323 423124 - 423090 - f 76 -9 -3.44876 | opp_overlap 423086 423092 423097 AAAGTACAATATGAA TATATTATTTAATTTT AGA ATAATTAAATAATATA CATTCAATGAGTGCA TERM 324 423723 - 423743 + G 77 -4 -5.39755 | CAGCTATAGGTTTAT TTGCTGCT ATTCC GGCAGTAA TTTTTTATAATTATC A1C_02310 423131 - 423856 + | TolQ protein A1C_02315 423856 - 424287 + | TolR protein A1C_02320 424277 - 425257 + | periplasmic protein TonB A1C_02325 426134 - 425757 - | hypothetical protein A1C_02330 426823 - 427317 + | hypothetical protein A1C_02335 428641 - 427268 - | proline/betaine transporter A1C_02340 430260 - 428725 - | alkaline protease secretion protein AprE A1C_02345 432235 - 430457 - | alkaline protease secretion ATP-binding protein AprD TERM 325 431656 - 431639 - G 80 -7.7 -4.18197 | opp_overlap 431632 431639 431638 ACCTTTTATCGAAAA CTCGGTA GCTT CACCGAG CGTTTTATTAGTAGC A1C_02350 433238 - 432222 - | aspartate-semialdehyde dehydrogenase TERM 326 433067 - 433081 + g 77 -4.3 -5.28176 | opp_overlap 433058 433067 TTAAATTAGTTAAAC TACTG ATTTG CAGTA TTTTTTCTCCATAAC A1C_02355 433593 - 433231 - | protein kinase C inhibitor 1 TERM 327 433713 - 433727 + r 82 -4.3 -5.5074 | opp_overlap 433713 433710 433705, overlap 433705 AAAAGATTAAAAGAA TTCTG TAAAT CAGAA TTTTTTATTGGATTG A1C_02360 434051 - 433818 - | hypothetical protein A1C_02365 434562 - 435110 + | ATP-dependent protease peptidase subunit hslU 435107 - 436459 + | ATP-dependent protease ATP-binding subunit lpxB 436652 - 436720 + | lipid-A-disaccharide synthase TERM 328 437585 - 437608 + G 79 -3.3 -5.55769 | gap 1 ACTCCTATGGTTGTG GCTTATCAAG TTAAT CTT-ATAAGC TTTTTTATTATAAGG A1C_02380 436733 - 437908 + | lipid-A-disaccharide synthase A1C_02385 438169 - 437888 - | hypothetical protein TERM 329 438016 - 438033 + g 84 -3.5 -5.82172 | TTTGTTTCATTAAAA TTTCTAA ATCA TTGGAAA TTTTTTTGTATTCCT TERM 330 438285 - 438304 + H 78 -6.6 -4.67048 | TCATTTTTACAGGCG TATACTAT TGTT ATAGTATA TTTGTTTTACACTAC TERM 331 438592 - 438610 + G 76 -5.4 -5.02287 | overlap 438607 AACTATATTTATTAC TATGCTAA ATT TTAGTATA TTTTATATTTTTGTG A1C_02390 438485 - 439534 + | hypothetical protein cyaY 439581 - 439886 + | frataxin-like protein A1C_02410 440370 - 440480 + | hypothetical protein A1C_02415 440495 - 440623 + | hypothetical protein TERM 332 440762 - 440734 - g 89 -9.2 -4.40561 | opp_overlap 440740, overlap 440740 GGGGCCCAAAAATAA TAAAAATACTAA TAATT TTAGTATTTTTA ACTGGATCCTGTGGT TERM 333 440756 - 440740 - g 77 -3.8 -5.51353 | opp_overlap 440740, overlap 440734 CAAAAATAATAAAAA TACTAA TAATT TTAGTA TTTTTAACTGGATCC A1C_02420 440670 - 440873 + | hypothetical protein A1C_02425 441000 - 441077 + | hypothetical protein TERM 334 441304 - 441291 - f 70 -3.9 -5.05113 | CTTATATAAATAAAA TTATC AAAG GATAA AAAGCATTTTTCCAT A1C_02430 441362 - 441742 + | hypothetical protein gltX 443269 - 441926 - | glutamyl-tRNA synthetase TERM 335 443068 - 443092 + g 79 -7.3 -4.43221 | opp_overlap 443071, overlap 443071 ATGTCTGATCCCAAT GAAGATTTAAA AAT TTTAAATCGTC TTTTATAGCGTCTTT A1C_02440 445854 - 443524 - | DNA topoisomerase I TERM 336 444796 - 444817 + g 76 -3.7 -5.38497 | gap 1, overlap 444799 ATTTGTCGGTCTTAT CGCCTCATGA GCT TCTTGAG-CG TTTTTTACTTTGGAT TERM 337 445946 - 445964 + r 82 -6.7 -4.92363 | opp_overlap 445946 ACGTATATATAATAG GAAGCGG TAATT CCGTTTC TTTTTGTAAATATTT A1C_02445 446172 - 445978 - | hypothetical protein TERM 338 446577 - 446596 + r 88 -9.4 -4.16842 | opp_overlap 446575, overlap 446572 TTTTATGAGCGAAGC TTCTTCTG TTTG CAGAAGAA TTTCTTGCACCTCCA A1C_02450 446957 - 446634 - | putative DNA processing protein DprA TERM 339 447053 - 447067 + r 75 -4.3 -5.18357 | opp_overlap 447046 447053 AATAATTATAACAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG A1C_02455 447753 - 447151 - | thioredoxin peroxidase 1 A1C_02460 448770 - 447835 - | membrane protease subunit stomatin/prohibitin-like protein TERM 340 449128 - 449142 + r 100 -4.3 -6.38492 | opp_overlap 449128 449121 AAATAATTTAAAAAA TTCTG ATTTA CAGAA TTTTTTTTTCTTCCT TERM 341 449142 - 449128 - R 75 -4.3 -5.23016 | opp_overlap 449128, overlap 449121 AAATAATTTAAAAAA TTCTG ATTTA CAGAA TTTTTTTTTCTTCCT A1C_02465 451117 - 449549 - | hypothetical protein A1C_02470 451193 - 451657 + | Holliday junction resolvase-like protein TERM 342 451810 - 451779 - f 100 -10.4 -4.41548 | opp_overlap 451782, overlap 451782 GTATATTCGACAAAA TAAGCCTATAAAAA CTTG TTTTTATAGGCTTT ACTGGATTCCCGCCT TERM 343 451807 - 451782 - f 100 -12.1 -4.32067 | opp_overlap 451782, overlap 451779 TATTCGACAAAATAA GCCTATAAAAA CTTG TTTTTATAGGC TTTACTGGATTCCCG TERM 344 451782 - 451807 + F 95 -12.1 -3.794 | opp_overlap 451779 451782 TATTCGACAAAATAA GCCTATAAAAA CTTG TTTTTATAGGC TTTACTGGATTCCCG A1C_02475 451872 - 452057 + | plasmid maintenance system antidote protein A1C_02480 452296 - 453150 + | dTDP-4-dehydrorhamnose reductase TERM 345 453183 - 453167 - f 72 -8.1 -3.31461 | overlap 453170 TAGTCATTGCGAGAA GAATTAC GTA GTAATTC GACGAAGTAATCCAG TERM 346 453187 - 453239 + F 100 -15.2 -3.09516 | opp_overlap 453190 453194, overlap 453206 453207 ACGTAGTAATTCGAC GAAGTAATCCAGTTAAAAATTCTG ATTTA CAGAGTTTTTAACTGGATTGCCGC TTCAATGCTACGCAC TERM 347 453236 - 453190 - f 100 -15.5 -3.19157 | opp_overlap 453187 453206 453207, overlap 453194 TAGTAATTCGACGAA GTAATCCAGTTAAAAATTCTG ATTTA CAGAGTTTTTAACTGGATTGC CGCTTCAATGCTACG TERM 348 453232 - 453194 - f 100 -14.9 -3.40639 | opp_overlap 453187 453206 453207, overlap 453190 AATTCGACGAAGTAA TCCAGTTAAAAATTCTG ATTTA CAGAGTTTTTAACTGGA TTGCCGCTTCAATGC A1C_02485 453327 - 454352 + | CapD protein A1C_02490 454345 - 455604 + | UDP-N-acetylglucosamine 2-epimerase TERM 349 456344 - 456308 - g 93 -8.7 -4.92777 | opp_overlap 456307 456321 456333, overlap 456313 AATATTAACGAAAAA CCAAACTCGGAAACCAT TTT ATGGCTTCCTAGATGGG AATTATCGTTTAAAA TERM 350 456339 - 456313 - g 93 -10.2 -4.37737 | opp_overlap 456307 456321 456333, overlap 456308 TAACGAAAAACCAAA CTCGGAAACCAT TTT ATGGCTTCCTAG ATGGGAATTATCGTT A1C_02495 455633 - 456907 + | hypothetical protein A1C_02500 456926 - 457111 + | hypothetical protein A1C_02505 457124 - 457387 + | hypothetical protein TERM 351 457628 - 457595 - f 85 -11.4 -2.62616 | overlap 457598 TCAGCTTGGACACCA GAATTTTTAGAAAA GCTAGG TTTTCTAAAAATTC CAAGATATATTAAAA TERM 352 457884 - 457896 + F 75 -4.9 -5.09895 | opp_overlap 457884 GAAAATAACTTAAAA TACTA ATT TAGTA TTTTTTAACTGGCTC TERM 353 458303 - 458319 + G 82 -10.9 -2.77433 | overlap 458300 458297 AATGGGGAGTATTTT TCATGGC TTA GCCATGA TGATATATATTATCC A1C_02510 458015 - 459829 + | glycosyltransferase TERM 354 460821 - 460811 - T 74 -6.8 -4.24569 | opp_overlap 460810, overlap 460808 TAAAAAGAACAATAA GCCT TGT AGGC ATAATATCAGACCCT A1C_02525 461656 - 460889 - | hypothetical protein A1C_02530 462687 - 461926 - | hypothetical protein TERM 355 462309 - 462327 + g 71 -3.1 -5.18371 | TAAAATCCGGAGCAG GGGCT ACACACACA AGCCC TTTTATTTTATCGGG A1C_02535 462720 - 463892 + | glycosyltransferase A1C_02540 464151 - 463954 - | ABC transporter, ATP-binding protein A1C_02545 464627 - 464313 - | hypothetical protein TERM 356 464708 - 464738 + r 72 -6.4 -4.25074 | CTGCTCCACTAAAGA TTATTTTTAATGAG GAA CTTGTTAAGAATAA TTTTAAAGTTTCATA A1C_02550 465086 - 464790 - | hypothetical protein A1C_02555 465290 - 465117 - | ABC transporter, ATP-binding protein TERM 357 465613 - 465585 - R 77 -7.6 -4.04209 | opp_overlap 465588, overlap 465588 TTAAATCATTAGAAA GTATATTAGGAT CAATT ATCCTAATATTC GTGGTTAAGTTTGTT rpsD 466026 - 465760 - | 30S ribosomal protein S4 TERM 358 466255 - 466235 - R 75 -4.7 -5.09521 | opp_overlap 466235 GGAAGAAAGTAAAAA GGCAGGT AAATAAA ACCTACC ATTTTGTAACTATTA A1C_02565 466885 - 466268 - | 30S ribosomal protein S4 TERM 359 467103 - 467119 + G 72 -5.9 -4.46155 | CCGCGTGTGATGTCG CTTGTAA TGT TTACAGG TTTTGTAGGTATGTG TERM 360 467289 - 467272 - g 70 -4.1 -5.10497 | opp_overlap 467274, overlap 467274 AACGTACTCAAAAAA GACCTCT CGTC AGAGGTG CTATAGAACCTGATG TERM 361 467287 - 467274 - g 74 -6.7 -4.17608 | opp_overlap 467274, overlap 467272 CGTACTCAAAAAAGA CCTCT CGTC AGAGG TGCTATAGAACCTGA A1C_02570 467004 - 467921 + | protoheme IX farnesyltransferase A1C_02575 468667 - 468248 - | putative lyase A1C_02580 468847 - 468719 - | putative lyase A1C_02585 469091 - 469471 + | hypothetical protein A1C_02590 469453 - 469566 + | hypothetical protein TERM 362 469793 - 469783 - f 72 -6.8 -4.14576 | opp_overlap 469782 469780 469792 TGAAAAATATAACAA CAGG GAA CCTG AAGTTTTTCATAGCT TERM 363 469997 - 469987 - f 78 -4 -5.4756 | AATCCCAATAAAAAA TCAT TAT ATGA AGATTTTATTATTTT A1C_02595 470014 - 470157 + | hypothetical protein TERM 364 470200 - 470210 + T 85 -2.4 -6.06529 | CATTCTTAGCAACGG CAGG AAT CCAG TTTTTTTTCTCTGTC A1C_02600 472937 - 470445 - | outer membrane assembly protein TERM 365 471737 - 471747 + g 71 -5.4 -4.62783 | GAGAAATAGTTATAT CTTG AGC CAAG TTTTTAAGCTCAATA A1C_02605 473317 - 473514 + | transposase rimM 474033 - 473536 - | 16S rRNA-processing protein A1C_02625 476738 - 476980 + | exodeoxyribonuclease VII small subunit TERM 366 477401 - 477429 + F 72 -4.7 -4.9218 | overlap 477402 CCTAATATTGTTTTA TTCATCATAATAA ATA TTGTTTTGATGAG TTTTTGTGCTGGATG A1C_02630 477518 - 477718 + | hypothetical protein TERM 367 477962 - 477975 + T 76 -6.7 -4.46112 | AATTTTTGTCTGTAT GCTTG GCAC CAAGC TTTATTTACATAAGA A1C_02635 478488 - 478114 - | 3-methyladenine DNA glycosylase TERM 368 478587 - 478575 - R 72 -7.7 -3.59979 | GTGGTGCATGGCAAA CAGGA TCA TCCTG CCATATATAACTTTC A1C_02640 479268 - 479020 - | hypothetical protein A1C_02645 479764 - 479261 - | NADH dehydrogenase subunit E A1C_02650 480985 - 479801 - | NADH dehydrogenase subunit D A1C_02655 481210 - 481064 - | endo/excinuclease amino terminal domain-containing protein A1C_02660 481332 - 481210 - | NADH dehydrogenase subunit C A1C_02665 482037 - 481414 - | NADH dehydrogenase subunit C A1C_02670 482539 - 482015 - | NADH dehydrogenase subunit B A1C_02675 482913 - 482542 - | NADH dehydrogenase subunit A TERM 369 482941 - 482984 + r 95 -10.6 -4.06964 | gap 1, opp_overlap 482938 482978 TATGAGTATAAGTGC TGTTT-ATGTCATTCCCGC CTGCGCC GCTGGAATGACATAAAACA TTTACTTCTATATGT A1C_02680 484239 - 483013 - | hypothetical protein A1C_02685 484718 - 484236 - | hypothetical protein A1C_02690 484894 - 485184 + | hypothetical protein A1C_02695 485337 - 485435 + | hypothetical protein A1C_02700 485768 - 485920 + | hypothetical protein xerD 486550 - 487470 + | site-specific tyrosine recombinase XerD TERM 370 487694 - 487716 + G 74 -7.8 -3.82499 | opp_overlap 487694 487695 487697, overlap 487695 TTAGAAAGAGAAGAA TTATGTGATG AAG CATCACGTAG TTTAGTAAATTTGGT TERM 371 487695 - 487715 + G 73 -9.1 -2.88776 | opp_overlap 487695 487694 487697, overlap 487694 TAGAAAGAGAAGAAT TATGTGATG AAG CATCACGTA GTTTAGTAAATTTGG TERM 372 488049 - 488027 - g 82 -7.8 -4.55118 | opp_overlap 488032, overlap 488041 GAAGTTGATAGAAAA GGAACGTTAA AAA TTAACTTTCC TAGCAAGCTACTTGA A1C_02710 487553 - 488614 + | hypothetical protein A1C_02715 488726 - 489889 + | hypothetical protein A1C_02720 490858 - 490076 - | enoyl-(acyl carrier protein) reductase TERM 373 490699 - 490714 + g 75 -4.7 -4.94902 | AACCTATTTCCTCAG CGAGT GGTTTA ACTCG TTTTTCTAGTACTTC TERM 374 491073 - 491061 - g 76 -6.3 -4.65838 | TATATAGTTCAAAAA TCCAA AAA TTGGA AAGAAGCCGTAAAAT lnt 490941 - 492431 + | apolipoprotein N-acyltransferase TERM 375 492809 - 492794 - f 72 -4.8 -4.89477 | overlap 492801 CTGCTAATAATAAAA TTGAAT ATCT ATTCAA AGAAATAGAAAGTTA TERM 376 493178 - 493164 - f 89 -4.3 -5.97979 | opp_overlap 493164 ACAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTAACTGTATTG TERM 377 493348 - 493320 - f 100 -9.2 -4.5448 | opp_overlap 493326, overlap 493326 GATCCATAAAAACAA TAAAAATACTAA TAATT TTAGTATTTTTA ACTAGCTCCCGTGGT TERM 378 493342 - 493326 - f 81 -3.8 -5.51353 | opp_overlap 493326, overlap 493320 TAAAAACAATAAAAA TACTAA TAATT TTAGTA TTTTTAACTAGCTCC TERM 379 494120 - 494130 + G 85 -2.6 -6.17669 | TGTTTATCTCTAGTA TTTT TCA AAAA TTTTTTTCTTTTCTT A1C_02730 494104 - 495021 + | hypothetical protein A1C_02735 495026 - 495859 + | ABC transporter permease protein TERM 380 496603 - 496587 - g 84 -10.9 -3.07233 | GCATAATTTGGAAGA TGCCGTA AAT TACGGCA AAAGGCTTATAGTAC A1C_02740 495976 - 496719 + | putative ABC transporter ATP-binding protein A1C_02745 497020 - 496721 - | transposase IS982 A1C_02750 498294 - 497779 - | hypothetical protein TERM 381 499095 - 499081 - g 74 -8.6 -3.28785 | CCTGAAAACAGGTAA GGTACT GCA AGTACC TATAGAGAAATGGGA lysK 498497 - 500086 + | lysyl-tRNA synthetase TERM 382 500112 - 500091 - f 95 -7.3 -6.12458 | overlap 500094 GAAAAAAATAAAAAA GACTGGATC CCGC GATCAAGTC GCGGGATGACACAGA A1C_02760 500147 - 501079 + | permease TERM 383 501671 - 501659 - g 72 -3.5 -5.25699 | ATTATAGAAGAAAAA TTAAA ATC TTTAA TGGATATACCAGTCT TERM 384 502142 - 502160 + G 77 -9 -3.29381 | opp_overlap 502153, overlap 502134 ATAGCAACAGGGCGA TCTGATTA TAA TAATCAGA TTAATAATGTTATGG A1C_02765 501203 - 503506 + | malic enzyme A1C_02770 503767 - 505716 + | hypothetical protein A1C_02775 506001 - 506198 + | transposase IS200-family protein TERM 385 506177 - 506204 + T 82 -8.6 -3.9444 | gap 1, opp_overlap 506180 506182, overlap 506181 506182 TTACACTTCTATTTA TAACATCTCAGCT TAT AGCTGAGA-GTTG TTTAGTTGCAGTTTA TERM 386 506201 - 506180 - T 72 -8.1 -3.35996 | gap 1, opp_overlap 506177 506181 506182, overlap 506182 CACTTCTATTTATAA CATCTCAGCT TAT AGCTGAGA-G TTGTTTAGTTGCAGT TERM 387 506181 - 506201 + T 81 -8.3 -4.08651 | opp_overlap 506180 506182, overlap 506177 506182 ACTTCTATTTATAAC ATCTCAGCT TAT AGCTGAGAG TTGTTTAGTTGCAGT TERM 388 506182 - 506200 + T 90 -11.8 -3.04468 | opp_overlap 506182 506180, overlap 506181 506177 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTGCAG TERM 389 506200 - 506182 - T 95 -11.8 -3.24924 | opp_overlap 506181 506177 506182, overlap 506180 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTGCAG A1C_02780 506444 - 506229 - | hypothetical protein A1C_02785 506568 - 506437 - | hypothetical protein A1C_02790 506857 - 506561 - | hypothetical protein A1C_02795 506954 - 508285 + | proline/betaine transporter TERM 390 508372 - 508408 + T 85 -7.6 -4.7373 | opp_overlap 508382, overlap 508382 TTAACCCACTGGATC CAGTTAAAAATACTAA AATTA TTAGTATTTTTTATTG TTTTTGCTGGAATGA TERM 391 508382 - 508398 + T 85 -3.8 -5.80727 | opp_overlap 508382, overlap 508372 GGATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTTTATTGTTTTT A1C_02800 509023 - 508784 - | hypothetical protein A1C_02805 509302 - 509120 - | hypothetical protein TERM 392 510456 - 510467 + r 74 -3 -5.34309 | TTTGAATTATTAGTA TTAC GGAA GTAA TTTTTATTTACTGCT A1C_02825 512589 - 511645 - | malate dehydrogenase TERM 393 511722 - 511734 + g 74 -6.3 -4.386 | CTTCTTTAGTTAATT GTAGT TCT ACTAC TTTTATGACACCTTC TERM 394 513652 - 513636 - R 85 -3.8 -5.80727 | opp_overlap 513636 AAAAACAATAAAAAA TACTAA TAGTT TTAGTA TTGCTGACTGGATCA A1C_02830 515353 - 513830 - | ADP,ATP carrier protein A1C_02835 515460 - 515287 - | CTP synthetase TERM 395 515782 - 515800 + H 72 -7.6 -3.56576 | overlap 515778 515778 ATACTACTCCATGTT TTTCAAAA ATA TTTTGAAA TTCATTATTAAATTT A1C_02845 516093 - 516260 + | CTP synthetase A1C_02855 517955 - 517215 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 396 517655 - 517674 + g 85 -8 -4.62203 | overlap 517653 GCATATCTCCCTGTA CATTAACT ATGT AGTTAATG TTTTGATTATTTGGA TERM 397 517819 - 517833 + g 70 -4.3 -4.7923 | GCAACATATGTATGC TCAAG GTTAG CTTGA TTTATTTGTTTGAAT TERM 398 518072 - 518056 - R 84 -9.4 -3.70773 | TTGTACACTTAAGAA GCGCCA TTCCG TGGCGC ACGCAAAAACATGAA TERM 399 518230 - 518214 - R 70 -8.7 -2.62396 | overlap 518216 CAGCTGGTTAGAGCA CACGCCT GAT AAGCGTG AGGTCGGAAGTTCAA A1C_02860 518666 - 518463 - | ADP-ribose pyrophosphatase MutT TERM 400 519197 - 519214 + G 77 -9.9 -2.68434 | overlap 519194 TCTTTTTTTTCTAGA TTCCAGC TTGC GCTGGAA TGATATACTATGCAG TERM 401 519898 - 519871 - g 100 -7.7 -5.54894 | gap 1, overlap 519873 519875 AATCCAGTAAAAAAA TAGATCCCGCGG TCAAG CCGCGGGA-CGA CACGGTTATAATAAA TERM 402 519896 - 519873 - g 95 -10.3 -4.40552 | gap 1, overlap 519871 519875 TCCAGTAAAAAAATA GATCCCGCGG TCAAG CCGCGGGA-C GACACGGTTATAATA TERM 403 519895 - 519875 - g 100 -14 -3.79295 | overlap 519873 519871 CAGTAAAAAAATAGA TCCCGCGG TCAAG CCGCGGGA CGACACGGTTATAAT A1C_02865 518880 - 520430 + | hypothetical protein folE 520423 - 520995 + | GTP cyclohydrolase I A1C_02875 521006 - 522289 + | prolyl-tRNA synthetase TERM 404 522319 - 522287 - f 100 -16.7 -3.89302 | opp_overlap 522290, overlap 522290 ATCAATTATATCAAA TAATATACCTATGAT ATT ATCATAGGTATATTA AATATAATACGTAAA TERM 405 522290 - 522316 + F 100 -14 -3.14647 | opp_overlap 522287 522290 AATTATATCAAATAA TATACCTATGAT ATT ATCATAGGTATA TTAAATATAATACGT TERM 406 522316 - 522290 - f 100 -14 -4.0648 | opp_overlap 522290, overlap 522287 AATTATATCAAATAA TATACCTATGAT ATT ATCATAGGTATA TTAAATATAATACGT A1C_02880 522339 - 522566 + | antitoxin of toxin-antitoxin system StbD A1C_02885 522566 - 522670 + | hypothetical protein A1C_02890 522907 - 523122 + | hypothetical protein ruvA 523128 - 523739 + | Holliday junction DNA helicase motor protein A1C_02900 523726 - 523860 + | hypothetical protein A1C_02905 524058 - 524276 + | hypothetical protein ruvB 524339 - 525367 + | Holliday junction DNA helicase B TERM 407 526116 - 526102 - g 100 -7.2 -5.61596 | AGTGTTACAAAAAAA CATCTA AGC TAGATG CGATGGTTTCACCGA A1C_02915 525360 - 527123 + | multidrug resistance protein TERM 408 527786 - 527802 + G 71 -5.2 -4.64992 | overlap 527773 AGTAAGGAAAATCCT GAAGTT TCTTT AACTTC TTTATATTTTTTGAC TERM 409 528133 - 528144 + G 73 -4.4 -5.00616 | opp_overlap 528133 TTCTACAGTAATTAA TCCT TTCA AGGA TTTTTTCAAAAGAGA A1C_02920 527474 - 528718 + | ampG protein TERM 410 529595 - 529574 - g 72 -8.9 -2.59921 | overlap 529573 ATCAAGGTGCAGAAG GTATGAAAA CAGG TTTTCATAC ACCAGCAGGTTATAA A1C_02925 528910 - 529830 + | penicillin-binding protein dacF precursor A1C_02930 530854 - 530156 - | rare lipoprotein A precursor A1C_02935 531446 - 530832 - | hypothetical protein TERM 411 531590 - 531638 + r 83 -10.6 -3.22884 | opp_overlap 531595 531607, overlap 531598 531607 GAGTGTGGCAATCCA GAAAACAAGTATAAAAATGCTA ATTTG TAGCATTTTTATACTTGCGTGC TTCGTCAATTACTCC TERM 412 531633 - 531595 - R 100 -17.9 -4.4715 | opp_overlap 531590 531598 531607, overlap 531607 TGGCAATCCAGAAAA CAAGTATAAAAATGCTA ATTTG TAGCATTTTTATACTTG CGTGCTTCGTCAATT TERM 413 531598 - 531630 + r 100 -13.8 -3.14136 | opp_overlap 531595 531607, overlap 531590 531607 CAATCCAGAAAACAA GTATAAAAATGCTA ATTTG TAGCATTTTTATAC TTGCGTGCTTCGTCA TERM 414 531607 - 531621 + r 70 -4.3 -4.98857 | opp_overlap 531595 531607, overlap 531598 531590 AAACAAGTATAAAAA TGCTA ATTTG TAGCA TTTTTATACTTGCGT TERM 415 531621 - 531607 - R 72 -4.3 -5.05301 | opp_overlap 531607 531598 531590, overlap 531595 AAACAAGTATAAAAA TGCTA ATTTG TAGCA TTTTTATACTTGCGT TERM 416 531868 - 531846 - R 100 -10.8 -5.04601 | opp_overlap 531852 GCCATAAAGTAAAAA TAGTAAGATA TTA TATCTTACTA TCCGGTAATTTATTC A1C_02940 532398 - 531856 - | intracellular septation protein A A1C_02945 533276 - 532428 - | FTR1 family protein A1C_02950 533666 - 533286 - | hypothetical protein A1C_02955 533888 - 533775 - | hypothetical protein A1C_02960 534890 - 533895 - | hypothetical protein A1C_02965 535202 - 535828 + | protocatechuate-3,4-dioxygenase, beta subunit TERM 417 535853 - 535891 + F 73 -5.5 -4.59773 | gap 1, overlap 535854 535856 ATGTAATTTCCTCGC TCT-TGTGTAATTCATGT TCTC GCAGGAATTACACATAGG TTTTTGGGAATGACA TERM 418 535856 - 535887 + F 76 -9.6 -2.84171 | overlap 535854 535853 TAATTTCCTCGCTCT TGTGTAATTCATGT TCTC GCAGGAATTACACA TAGGTTTTTGGGAAT A1C_02970 536003 - 536668 + | thiol:disulfide interchange protein tlpA A1C_02975 536661 - 537575 + | Signal peptide peptidase SppA dut 537731 - 538177 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 419 538309 - 538325 + F 72 -8.1 -3.31461 | overlap 538312 CTGGATTGCTTCGTC GAATTAC TAC GTAATTC TTCTCGCAATGGCTA A1C_02985 538373 - 540370 + | soluble lytic murein transglycosylase precursor A1C_02990 540450 - 541631 + | hypothetical protein TERM 420 541636 - 541677 + F 86 -9.6 -3.72141 | overlap 541637 541640 ATTTAGAATAATTTC TTTCCTATGTCATGTCGT TTATCC ACGGCATGACATAGTAGG TTTACCTGTGCATAT TERM 421 541637 - 541676 + F 82 -10.9 -2.82803 | overlap 541636 541640 TTTAGAATAATTTCT TTCCTATGTCATGTCGT TTATCC ACGGCATGACATAGTAG GTTTACCTGTGCATA TERM 422 541640 - 541673 + F 100 -14.8 -2.67244 | overlap 541637 541636 AGAATAATTTCTTTC CTATGTCATGTCGT TTATCC ACGGCATGACATAG TAGGTTTACCTGTGC A1C_02995 541716 - 542669 + | microcin C7 self-immunity protein A1C_03000 545436 - 542770 - | hypothetical protein TERM 423 543030 - 543051 + g 100 -7.3 -5.62552 | CCTCCATCATTTCAC GACTCGATC TCGG GATCCAGTC TTTTTTAATTTTTTT TERM 424 543378 - 543365 - G 84 -5.3 -5.34857 | overlap 543360 TCAAATAAAATAAAA GCTTT ACTG AAAGC CGTGAGTTTTATTTG TERM 425 544141 - 544131 - G 82 -2.6 -6.04324 | opp_overlap 544131 GTAAAAAAGAAAAAA TTTT AGG AAAA TCCTTTTTATCCGTT A1C_03005 545541 - 545924 + | hypothetical protein A1C_03010 546710 - 545982 - | hypothetical protein A1C_03015 548503 - 546881 - | cytochrome c oxidase polypeptide I TERM 426 548685 - 548695 + r 72 -6.8 -4.08216 | TGACTATAAATTGTT CTGG ATT CCAG TTTTCACGGGAATAA A1C_03020 549203 - 549021 - | hypothetical protein A1C_03025 549334 - 549200 - | hypothetical protein A1C_03030 550519 - 549578 - | cytochrome c oxidase polypeptide II TERM 427 552008 - 551996 - g 72 -3.3 -5.29846 | AACGTCAAATAAAAA GTGGT GAT ACCGC AACCGTAATAATGGA A1C_03035 551338 - 552672 + | hypothetical protein TERM 428 552824 - 552859 + F 82 -5.1 -5.47218 | gap 1, opp_overlap 552834, overlap 552828 552834 CTTGATAGCGGGATC CAGTTAAAAATACTAA AATTA TTAGTATTTTT-ATTG TTTTTTTGGATACAG TERM 429 552828 - 552856 + F 100 -9.2 -4.8236 | opp_overlap 552834, overlap 552824 552834 ATAGCGGGATCCAGT TAAAAATACTAA AATTA TTAGTATTTTTA TTGTTTTTTTGGATA TERM 430 552834 - 552850 + F 81 -3.8 -5.54403 | opp_overlap 552834, overlap 552828 552824 GGATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTTATTGTTTTTT lspA 552987 - 553577 + | lipoprotein signal peptidase A1C_03045 553598 - 553846 + | hypothetical protein murD 553916 - 555394 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 431 555482 - 555467 - f 77 -4.8 -5.22312 | opp_overlap 555467 555460 AGCCAGACTAAAAAA TCTTTA ATTT TAAAGA CTTTTTATTAGATAG TERM 432 555527 - 555508 - f 71 -8 -3.54129 | opp_overlap 555508 555512, overlap 555512 GATAGTTTTTGCAAA TAAAGCTT CTTG AAGCTTTA TTTAACTGGATTCCC TERM 433 555508 - 555527 + F 72 -8 -3.68619 | opp_overlap 555508 555512, overlap 555512 GATAGTTTTTGCAAA TAAAGCTT CTTG AAGCTTTA TTTAACTGGATTCCC A1C_03055 555649 - 556782 + | cell division protein FtsW TERM 434 557918 - 557901 - g 73 -7.7 -3.69256 | AGTGATTTAATAGAA GGAGTGA TTTA TCACCCC GTGGCTTGACACCTG murG 556779 - 557927 + | N-acetylglucosaminyl transferase A1C_03065 558128 - 558784 + | hypothetical protein TERM 435 558844 - 558865 + F 77 -7.5 -4.26202 | opp_overlap 558844 558843 558837 AATAAAAATTAATAT TTTAACATA GAAA TATGTTAAA TTTATTAATAGGTAT A1C_03070 559101 - 559313 + | hypothetical protein TERM 436 559367 - 559383 + T 83 -6.7 -5.10004 | opp_overlap 559367, overlap 559361 GGGATCTAGTTAAAA TACTAAT ATT ATTAGTA TTTTTAGTTATTTTT TERM 437 559383 - 559367 - T 74 -6.7 -4.19817 | opp_overlap 559361 559367 GGGATCTAGTTAAAA TACTAAT ATT ATTAGTA TTTTTAGTTATTTTT TERM 438 561257 - 561234 - T 70 -5.2 -4.54727 | opp_overlap 561234, overlap 561236 CTCCCGAAAGTAAAA TAGCGGTAGT AATA ACAACCGCAA GTTCGTGTAGTAATT TERM 439 561255 - 561236 - T 76 -7.8 -3.88396 | opp_overlap 561234, overlap 561234 CCCGAAAGTAAAATA GCGGTAGT AATA ACAACCGC AAGTTCGTGTAGTAA A1C_03095 561978 - 561574 - | RND family efflux transporter A1C_03100 562566 - 562465 - | RND family transporter membrane-fusion protein A1C_03105 563213 - 562920 - | RND family transporter membrane-fusion protein A1C_03110 563489 - 563292 - | RND family transporter membrane-fusion protein A1C_03115 564052 - 563672 - | hypothetical protein A1C_03120 565550 - 564528 - | glycosyltransferase TERM 440 564646 - 564664 + g 71 -3.2 -5.31877 | overlap 564644 TTTGCTTTTAATGGG TTATCTAT TAG ATAGACAA TTTTTTCTGCTAAAT TERM 441 564764 - 564779 + g 77 -9 -3.23853 | opp_overlap 564761 564764 564766, overlap 564762 TATCTGTACTAACGA GAGGCA CGCT TGCCTC TATTGCTTCAAGCAC TERM 442 564779 - 564764 - G 72 -9 -2.78216 | opp_overlap 564764 564762, overlap 564761 564766 TATCTGTACTAACGA GAGGCA CGCT TGCCTC TATTGCTTCAAGCAC A1C_03125 566087 - 565695 - | hypothetical protein TERM 443 566002 - 566012 + g 74 -4 -5.24129 | AGTAATCCATGATTT GATT TCC AATC TTTTTTATCAGGAAA TERM 444 566461 - 566499 + H 80 -8.6 -3.83409 | gap 1, opp_overlap 566460 566461, overlap 566465 TTTATGTATAATAAC TTC-ATTATAGCAAATT TGCTAT AATTTGCTATAATAGAA TTTCCTAATATGTAA TERM 445 566499 - 566461 - H 71 -8.6 -2.88945 | gap 1, opp_overlap 566461 566465, overlap 566460 TTTATGTATAATAAC TTC-ATTATAGCAAATT TGCTAT AATTTGCTATAATAGAA TTTCCTAATATGTAA TERM 446 566465 - 566484 + H 74 -8 -3.86202 | opp_overlap 566460 566461, overlap 566461 TGTATAATAACTTCA TTATAGCA AATT TGCTATAA TTTGCTATAATAGAA TERM 447 566910 - 566896 - g 82 -10 -3.34895 | GTTAGTTTTAATGAA GCTTGG ATG CCAAGC CGTGATAAAATTTGG dapF 566521 - 567333 + | diaminopimelate epimerase A1C_03135 567323 - 568573 + | MiaB-like tRNA modifying enzyme TERM 448 568641 - 568624 - f 85 -5.5 -5.43866 | opp_overlap 568634 CAATTTTCAAAAAAA CTGGACC CCGT GGTCAAG CCATTGGGTGACAAA TERM 449 569238 - 569227 - g 76 -7.2 -4.29738 | opp_overlap 569227 TTAGAGCGATGAAAA GCGG CAAA CCGC CTTTTAGGTTTATAG pheS 568674 - 569723 + | phenylalanyl-tRNA synthetase subunit alpha pheT 569720 - 572116 + | phenylalanyl-tRNA synthetase subunit beta A1C_03150 572240 - 573379 + | DNA polymerase III subunit beta A1C_03155 573670 - 574173 + | hypothetical protein TERM 450 574261 - 574241 - f 73 -6 -4.52589 | GTCTGTGACACAAAA CCACGTGG TCAAG CCGCGCGG GGTGACAAATAAATT TERM 451 574922 - 574900 - g 80 -7.6 -4.32482 | opp_overlap 574902 ATTCAGAATTTAAAA GAGTGGCCTG AAG CAGTCCGCTC TATGCAAGAGAAATG leuS 574288 - 576900 + | leucyl-tRNA synthetase TERM 452 577056 - 577073 + T 71 -5.7 -4.36778 | opp_overlap 577056, overlap 577050 TTGCCCAGTTAAAAA TACTAAT AATT ATTAGTA TTTTAAGTTATATTT TERM 453 577073 - 577056 - T 73 -5.7 -4.65895 | opp_overlap 577056 577050 TTGCCCAGTTAAAAA TACTAAT AATT ATTAGTA TTTTAAGTTATATTT A1C_03165 577905 - 577294 - | ribonuclease D A1C_03170 578361 - 578038 - | hypothetical protein A1C_03175 579038 - 578358 - | phosphatidate cytidylyltransferase TERM 454 578677 - 578693 + gr 90 -10.9 -3.66666 | TTAGGACTGATTTTT GGAGCAA GCT TTGCTCC TTTAAAAGTTTTGCC A1C_03180 579678 - 578998 - | undecaprenyl pyrophosphate synthetase TERM 455 579832 - 579803 - R 71 -4.6 -4.73105 | gap 1, opp_overlap 579811, overlap 579811 ATCCAGAAAAAATAA TAAAAAAATTCTG TAAAT CAGAATTTT-TTA CTGGATTGCTTCGTC TERM 456 579825 - 579811 - R 91 -4.3 -6.04419 | opp_overlap 579811, overlap 579803 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 457 579811 - 579825 + r 75 -4.3 -5.18357 | opp_overlap 579803 579811 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 458 579848 - 579864 + r 81 -8.1 -4.30576 | CTGGATTGCTTCGTC GAATTAC TAC GTAATTC TTTTCGTAATGACGA A1C_03185 581173 - 579911 - | osmolarity sensor protein EnvZ A1C_03190 581994 - 581314 - | PetR protein TERM 459 582066 - 582096 + H 70 -8.2 -3.19913 | TCATAAGCTGTTTTT TTGGACCCCGTGGT CAA GCCACGGGGTGAGA TCTTAGATTATATCT A1C_03195 582134 - 583006 + | branched-chain amino acid aminotransferase A1C_03200 583124 - 584008 + | dihydrodipicolinate synthase smpB 584005 - 584463 + | SsrA-binding protein A1C_03210 584629 - 585423 + | Thiol:disulfide interchange protein DsbA TERM 460 585645 - 585609 - T 79 -7.6 -4.25104 | opp_overlap 585619, overlap 585612 585619 CGGGGTTCATGAAAA CAATAAAAAATACTAA TAATT TTAGTATTTTTAACTG GATCCCGTGCTCGCA TERM 461 585642 - 585612 - T 70 -5.7 -4.25256 | opp_overlap 585619, overlap 585609 585619 GGTTCATGAAAACAA TAAAAAATACTAA TAATT TTAGTATTTTTAA CTGGATCCCGTGCTC TERM 462 585635 - 585619 - T 85 -3.8 -5.77677 | opp_overlap 585619, overlap 585612 585609 GAAAACAATAAAAAA TACTAA TAATT TTAGTA TTTTTAACTGGATCC A1C_03215 586679 - 585801 - | succinyl-CoA synthetase subunit alpha sucC 588002 - 586842 - | succinyl-CoA synthetase subunit beta A1C_03225 588461 - 588222 - | hypothetical protein A1C_03230 590789 - 588753 - | acylamino-acid-releasing protein A1C_03235 591513 - 590878 - | hypothetical protein rbfA 592204 - 591815 - | ribosome-binding factor A A1C_03245 592633 - 592208 - | hypothetical protein TERM 463 592336 - 592316 - G 74 -5.4 -4.86861 | GAATAAAGAAATAAA GCATCCCC AAAAA GGAAATGC CATTAAGAAAATTAT TERM 464 592370 - 592348 - G 85 -8 -4.71828 | opp_overlap 592346 592344 592348 592365 ATGCCATTAAGAAAA TTATAAATAT CTC ATATTTATAA TATAATTTTGTTAAA TERM 465 592348 - 592370 + g 71 -8 -3.18634 | opp_overlap 592348, overlap 592346 592344 592365 ATGCCATTAAGAAAA TTATAAATAT CTC ATATTTATAA TATAATTTTGTTAAA A1C_03250 592768 - 593289 + | hypothetical protein recR 593442 - 594065 + | recombination protein RecR A1C_03260 594276 - 594626 + | hypothetical protein A1C_03265 594825 - 594908 + | hypothetical protein TERM 466 594973 - 594942 - T 100 -13.3 -3.91032 | TAATCATTCGACAAA GTGCTCTTTAATA TTGAGT TATTAAAGAGCAC TTAAAGCTATAACAA A1C_03270 595514 - 595074 - | hypothetical protein A1C_03275 595840 - 595676 - | hypothetical protein A1C_03280 596078 - 595833 - | hypothetical protein A1C_03285 596457 - 596305 - | hypothetical protein A1C_03290 596920 - 596717 - | hypothetical protein TERM 467 596883 - 596863 - G 86 -11.3 -2.96963 | opp_overlap 596863, overlap 596860 596867 TATCACCAACAAGCA GTAACCATA AAA TATGGTTAC TTTCAGAAAAGTTAA TERM 468 596863 - 596883 + g 90 -11.3 -3.54459 | opp_overlap 596860 596863 596867 TATCACCAACAAGCA GTAACCATA AAA TATGGTTAC TTTCAGAAAAGTTAA TERM 469 596916 - 596961 + g 85 -9.3 -4.09805 | opp_overlap 596927, overlap 596920 GAAGACTTGTGTGAT TTCATATAGAATGCCTAGTTA TTGT TAACAAGGCATTGTATATTAA TTTGATTCTTAGTCA TERM 470 596920 - 596957 + r 83 -10.1 -3.65261 | opp_overlap 596927, overlap 596916 ACTTGTGTGATTTCA TATAGAATGCCTAGTTA TTGT TAACAAGGCATTGTATA TTAATTTGATTCTTA TERM 471 596950 - 596927 - R 74 -8.2 -3.59698 | opp_overlap 596920 596916 TGATTTCATATAGAA TGCCTAGTTA TTGT TAACAAGGCA TTGTATATTAATTTG ppnK 597768 - 597001 - | inorganic polyphosphate/ATP-NAD kinase TERM 472 598234 - 598222 - g 71 -2 -5.36364 | CTAAAAATATAAAAA TTCA TGAAG TGAA ATCTGGTAGTAAAAT A1C_03300 597855 - 599537 + | hypothetical protein TERM 473 599720 - 599736 + G 71 -8.1 -3.31792 | overlap 599716 599723 CTGGATTGCTTCGTC GAATTAC GAT GTAATTC TTCTCGCAATGGTAG gpsA 599616 - 599834 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase A1C_03310 599827 - 600780 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 474 600853 - 600809 - f 100 -11 -4.28774 | gap 1, opp_overlap 600778, overlap 600810 600813 GCATGGAACGCAAAA CCTACTTTATGTCATTCCAGC CTAC GCGGGAATGACATAAAAT-GA TCCATGCAACAACGC TERM 475 600852 - 600810 - f 100 -12.3 -3.16783 | gap 1, opp_overlap 600778, overlap 600809 600813 CATGGAACGCAAAAC CTACTTTATGTCATTCCAGC CTAC GCGGGAATGACATAAAAT-G ATCCATGCAACAACG TERM 476 600850 - 600813 - f 100 -15.1 -2.77861 | overlap 600810 600809 GGAACGCAAAACCTA CTTTATGTCATTCCAGC CTAC GCGGGAATGACATAAAA TGATCCATGCAACAA A1C_03315 601037 - 601210 + | hypothetical protein A1C_03320 601373 - 601203 - | hypothetical protein TERM 477 602527 - 602539 + G 80 -5.5 -5.23644 | TTATCCTGAGAAAGT TGCGG CTA CCGTA TTTTTATCTTTGCTT A1C_03325 601682 - 602611 + | permease A1C_03330 602670 - 603542 + | hypothetical protein A1C_03335 603763 - 604695 + | thioredoxin reductase A1C_03340 604809 - 605024 + | hypothetical protein TERM 478 605182 - 605171 - g 73 -4.4 -4.98103 | CAATAAAACATAAAA TGGA CAAA TCCA AACTTGAGATATTAC A1C_03345 605041 - 605337 + | hypothetical protein A1C_03350 605364 - 605576 + | hypothetical protein A1C_03355 605665 - 606000 + | hypothetical protein A1C_03360 606034 - 606150 + | hypothetical protein A1C_03365 606637 - 606834 + | transposase IS200-family protein TERM 479 606813 - 606840 + F 82 -8.6 -3.88618 | gap 1, opp_overlap 606816 606818, overlap 606817 606818 TTACACTTCTATTTA TAACATCTCAGCT TAT AGCTGAGA-GTTG TTTAGTGATTATATT TERM 480 606837 - 606816 - f 72 -8.1 -3.35996 | gap 1, opp_overlap 606813 606817 606818, overlap 606818 CACTTCTATTTATAA CATCTCAGCT TAT AGCTGAGA-G TTGTTTAGTGATTAT TERM 481 606817 - 606837 + F 81 -8.3 -4.05529 | opp_overlap 606816 606818, overlap 606813 606818 ACTTCTATTTATAAC ATCTCAGCT TAT AGCTGAGAG TTGTTTAGTGATTAT TERM 482 606818 - 606836 + F 90 -11.8 -3.02233 | opp_overlap 606816 606818, overlap 606817 606813 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTGATTA TERM 483 606836 - 606818 - f 95 -11.8 -3.24924 | opp_overlap 606818 606817 606813, overlap 606816 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTGATTA TERM 484 606980 - 607018 + F 76 -9.9 -2.63723 | opp_overlap 606980 606983 606992, overlap 606979 606983 606992 GGCAATCCAGAAAAA TAAGTAAAAAAATTCTG TAAAT CAGAATTTTTTTACTGG ATTGCTTCGTCGAAA TERM 485 607018 - 606980 - f 88 -7.7 -4.91712 | opp_overlap 606980 606979 606983 606992, overlap 606983 606992 GGCAATCCAGAAAAA TAAGTAAAAAAATTCTG TAAAT CAGAATTTTTTTACTGG ATTGCTTCGTCGAAA TERM 486 607015 - 606983 - f 100 -13.8 -4.55383 | opp_overlap 606983 606980 606979 606992, overlap 606980 606992 AATCCAGAAAAATAA GTAAAAAAATTCTG TAAAT CAGAATTTTTTTAC TGGATTGCTTCGTCG TERM 487 606983 - 607015 + F 100 -13.8 -2.61216 | opp_overlap 606980 606983 606992, overlap 606980 606979 606992 AATCCAGAAAAATAA GTAAAAAAATTCTG TAAAT CAGAATTTTTTTAC TGGATTGCTTCGTCG TERM 488 607006 - 606992 - f 88 -4.3 -5.73672 | opp_overlap 606992 606983 606980 606979, overlap 606983 606980 AAATAAGTAAAAAAA TTCTG TAAAT CAGAA TTTTTTTACTGGATT TERM 489 606992 - 607006 + F 82 -4.3 -5.54894 | opp_overlap 606983 606980 606992, overlap 606983 606980 606979 AAATAAGTAAAAAAA TTCTG TAAAT CAGAA TTTTTTTACTGGATT TERM 490 608478 - 608460 - g 85 -10.4 -3.53811 | TCCATTGCCTGGAAA TGCAAAAG CAC CTTTTGCA GGGCGTAAAGCTTCA A1C_03370 607132 - 608568 + | succinate semialdehyde dehydrogenase TERM 491 608627 - 608671 + F 100 -16.5 -4.11692 | opp_overlap 608625 TTGCGTGTATCAATT TCACCTGTGTCACCACGTGGT CAA GCCATGAGGTGACACGGTTGA TTTTACCGGTCCATG TERM 492 609016 - 608983 - g 71 -7.7 -3.47542 | opp_overlap 608983, overlap 608981 CATAATACCTAAAGA GTTTAATAATGCTTT ATGT AATACATTATTAAAC TTTGAGAATAATGAT A1C_03375 608684 - 609097 + | hypothetical protein A1C_03380 609097 - 609942 + | glycosyltransferase TERM 493 610205 - 610239 + G 78 -9.4 -3.34895 | opp_overlap 610210, overlap 610210 TAAATCCACAACAGC AAAAAGCAGTTCTTCA TAC TGAAGGACCGCTTTTA TTGCTTGCAGGTGCA TERM 494 610210 - 610234 + G 93 -9.3 -4.78572 | opp_overlap 610210, overlap 610205 CCACAACAGCAAAAA GCAGTTCTTCA TAC TGAAGGACCGC TTTTATTGCTTGCAG TERM 495 610234 - 610210 - g 93 -9.3 -4.90906 | opp_overlap 610210 610205 CCACAACAGCAAAAA GCAGTTCTTCA TAC TGAAGGACCGC TTTTATTGCTTGCAG A1C_03385 610162 - 612123 + | DNA helicase II A1C_03390 612214 - 612720 + | hypothetical protein A1C_03395 612795 - 613064 + | hypothetical protein A1C_03400 613253 - 613501 + | hypothetical protein A1C_03405 613556 - 614923 + | hypothetical protein A1C_03410 616270 - 615269 - | threonine dehydratase A1C_03415 616356 - 618692 + | ATP-dependent protease La A1C_03420 618897 - 618712 - | hypothetical protein TERM 496 619017 - 618993 - R 74 -8.6 -3.37354 | overlap 618995 CAGACTCAGTCATAA GATACCGCGA TCAAG TCGCGGTATG ACGCCAAAGAAACTT TERM 497 619015 - 618995 - R 93 -11.2 -3.254 | overlap 618993 GACTCAGTCATAAGA TACCGCGA TCAAG TCGCGGTA TGACGCCAAAGAAAC A1C_03435 620494 - 620393 - | hypothetical protein TERM 498 621143 - 621133 - H 74 -5.4 -4.90918 | AGAAAACGAAGAAAA CCAT GAC ATGG ATTGGCGAGAGTGAC A1C_03440 621392 - 621610 + | hypothetical protein TERM 499 621703 - 621671 - f 77 -8 -4.09187 | gap 1, opp_overlap 621683, overlap 621681 621682 ACAAAATAAAGATAA GCATCCTAAACTCTA CATC TAAAGTTTAG-ATGC AGTAATTTGTAATAA TERM 500 621783 - 621744 - f 95 -10.4 -4.33928 | gap 1, opp_overlap 621741 621749, overlap 621749 621751 TACTCTAAATATAAA TTAATTATATAGGTGTTAC TTA GTAACGCCTATAT-ATTAA TGATTTCAGATTATA TERM 501 621749 - 621779 + F 100 -15 -3.33037 | opp_overlap 621749 621744 621751, overlap 621741 TAAATATAAATTAAT TATATAGGTGTTAC TTA GTAACGCCTATATA TTAATGATTTCAGAT TERM 502 621779 - 621749 - f 100 -12.8 -2.82488 | opp_overlap 621741 621749, overlap 621744 621751 TAAATATAAATTAAT TATATAGGTGTTAC TTA GTAACGCCTATATA TTAATGATTTCAGAT TERM 503 621777 - 621751 - f 83 -11 -2.93941 | opp_overlap 621749 621741, overlap 621749 621744 AATATAAATTAATTA TATAGGTGTTAC TTA GTAACGCCTATA TATTAATGATTTCAG A1C_03445 621809 - 622387 + | sigma(54) modulation protein A1C_03450 622387 - 622545 + | carbonic anhydrase/acetyltransferase, isoleucine patch superfamily protein A1C_03455 623918 - 623031 - | methylenetetrahydrofolate dehydrogenase A1C_03460 624225 - 623926 - | NADH dehydrogenase subunit N A1C_03465 625264 - 624260 - | thioredoxin reductase TERM 504 625644 - 625634 - R 71 -3.2 -5.20333 | overlap 625628 CATCCATAAGAAAAA CGCT TTC AGCA GCAACCTACGGAGCA A1C_03470 626015 - 625941 - | ribonucleotide-diphosphate reductase subunit alpha A1C_03475 626253 - 626002 - | hypothetical protein TERM 505 626308 - 626280 - H 74 -8.9 -3.27475 | overlap 626278 TTCCGCATGATAAGA CTGTGTGTGCCTT AAA AAGGCATAAACAG TAATCAAGAGTGATG TERM 506 626900 - 626912 + G 80 -7.7 -4.18934 | TAAAGGTCATTCATC CGGTA TTA TACCG TTTATTAAAGTAATG TERM 507 627606 - 627594 - g 73 -7.7 -3.64572 | overlap 627592 CAAATAAAAAAAGTA CCGAT AGA ATCGG TGATGGCAAAAGTTT A1C_03480 626481 - 628304 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 628552 - 629535 + | ribonucleotide-diphosphate reductase subunit beta TERM 508 629773 - 629760 - g 74 -6.7 -4.20918 | TCTAACGCTAATAAA GCACT AAAA AGTGC AATTAAGGACTTATC TERM 509 630344 - 630323 - g 71 -3.1 -5.19328 | ACCCGACAAGAAAAA TGTGTTAAA AATA TTTAATACA CATCCTCATTTTAAG A1C_03490 629688 - 632546 + | hypothetical protein A1C_03505 633395 - 633472 + | hypothetical protein A1C_03515 634142 - 634339 + | transposase IS200-family protein TERM 510 634318 - 634345 + F 82 -8.6 -3.90291 | gap 1, opp_overlap 634321 634323, overlap 634322 634323 TTACACTTCTATTTA TAACATCTCAGCT TAT AGCTGAGA-GTTG TTTAGTTAAAGGGGT TERM 511 634342 - 634321 - f 72 -8.1 -3.35996 | gap 1, opp_overlap 634318 634322 634323, overlap 634323 CACTTCTATTTATAA CATCTCAGCT TAT AGCTGAGA-G TTGTTTAGTTAAAGG TERM 512 634322 - 634342 + F 81 -8.3 -4.0825 | opp_overlap 634321 634323, overlap 634318 634323 ACTTCTATTTATAAC ATCTCAGCT TAT AGCTGAGAG TTGTTTAGTTAAAGG TERM 513 634323 - 634341 + F 90 -11.8 -3.04468 | opp_overlap 634321 634323, overlap 634322 634318 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTAAAG TERM 514 634341 - 634323 - f 95 -11.8 -3.24924 | opp_overlap 634323 634322 634318, overlap 634321 CTTCTATTTATAACA TCTCAGCT TAT AGCTGAGA GTTGTTTAGTTAAAG A1C_03520 634372 - 634629 + | hypothetical protein A1C_03525 634663 - 634848 + | hypothetical protein TERM 515 635100 - 635129 + T 87 -11.1 -3.23735 | opp_overlap 635097 635107, overlap 635107 635127 AGTAGGAATCCATGC TAAAAAATCTTTA AAAT TAAAGATTTTTTA TTAGATAATTTTTTT TERM 516 635122 - 635107 - T 75 -4.8 -5.05782 | opp_overlap 635107 635100, overlap 635097 ATCCATGCTAAAAAA TCTTTA AAAT TAAAGA TTTTTTATTAGATAA TERM 517 635107 - 635122 + T 81 -4.8 -5.4833 | opp_overlap 635097 635107, overlap 635100 ATCCATGCTAAAAAA TCTTTA AAAT TAAAGA TTTTTTATTAGATAA TERM 518 635127 - 635137 + T 81 -2.6 -5.78622 | opp_overlap 635097, overlap 635100 AAAATTAAAGATTTT TTAT TAG ATAA TTTTTTTTCAAATAA miaA 636110 - 635172 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 519 636243 - 636197 - R 73 -8.9 -3.19091 | opp_overlap 636203, overlap 636201 AGAGTCATTGACGAA GCAATCCAGTAAAAAATGCTG ATTTA CAGAATTTTTCTATGGATTGC CACGCGGCCTACGGC A1C_03535 637955 - 636513 - | phosphomannomutase TERM 520 637522 - 637505 - G 84 -9.9 -3.39449 | TTGTATTAATATGAA TTCCTGC TTTC GCAGGAA TGACATCAGGGGTTG TERM 521 638020 - 638043 + r 81 -8.4 -4.2828 | opp_overlap 638020 ATTAATAATTATAAA CATATAAAAA CTTG TTTTTATATG TTTTACTGGATCCAC TERM 522 638043 - 638020 - R 81 -8.4 -4.14859 | opp_overlap 638020 ATTAATAATTATAAA CATATAAAAA CTTG TTTTTATATG TTTTACTGGATCCAC A1C_03540 638855 - 638133 - | ABC transporter ATP-binding protein A1C_03545 639369 - 638992 - | hypothetical protein A1C_03550 639994 - 639395 - | hypothetical protein A1C_03555 640959 - 640000 - | KpsF protein A1C_03560 643454 - 641211 - | polynucleotide phosphorylase/polyadenylase TERM 523 641301 - 641313 + g 82 -7.7 -4.43309 | overlap 641307 ACTAGAATCACGTCG CTCAG GTT CTGAG TTTTCCTTAGAATTA TERM 524 642024 - 642038 + g 79 -8.6 -3.91716 | opp_overlap 642023 642021 642024 AATATCCGATAATAC GGCAAA TTT TTTGCC TTCTTTAACAAGTCC rpsO 643890 - 643615 - | 30S ribosomal protein S15 truB 644793 - 643912 - | tRNA pseudouridine synthase B TERM 525 644616 - 644626 + g 71 -6.8 -3.97636 | TAGAATCAATTAGCA GCTG TAT CAGC TTTGTAGCTTCACCT TERM 526 645120 - 645132 + G 87 -7.7 -4.7416 | TACTATGATAGGTGC CGAGA CTA TCTCG TTTTTGAAGTTTTGG A1C_03575 644917 - 646452 + | ADP,ATP carrier protein TERM 527 646612 - 646584 - f 74 -9 -3.26842 | opp_overlap 646579, overlap 646588 AAAATAATTGACGAA GCAATCTCAG GCAAAATTT CTGAGATTGC CACGCTCCTTACAGT TERM 528 646807 - 646785 - g 88 -7 -5.25893 | overlap 646796 ATATAGATGAAAAAA CACAAGAACA AGC TGCTCCTGCG CAACCTACGCTAGAT TERM 529 649353 - 649343 - g 85 -3.2 -6.09888 | CTTGAAGAAAAAAAA GCTG AAG CAAC AAAAAAAGTAGATGA A1C_03580 646721 - 649771 + | cell surface antigen A1C_03585 650002 - 649808 - | hypothetical protein TERM 530 649996 - 649979 - G 90 -11.3 -3.53012 | GGTGGCTTTTCCAAA TTCCCGC TTTC GCGGGAA TGACATCGGGATAGT TERM 531 650056 - 650074 + r 95 -11.8 -3.24924 | opp_overlap 650021 650020, overlap 650054 ATGATAGTGACTATT TCTCAGCT ATA AGCTGAGA TGTTATAAATAGAAG A1C_03590 650255 - 650058 - | transposase IS200-family protein A1C_03595 651014 - 650622 - | hypothetical protein A1C_03600 651542 - 652369 + | ribonuclease BN, putative A1C_03605 653320 - 652487 - | glutamine synthetase A1C_03610 653319 - 654041 + | hypothetical protein TERM 532 654172 - 654186 + FH 88 -4.3 -5.73672 | opp_overlap 654172 AAGGAAGAACAAACA TTCTG TAAAT CAGAA TTTTTTTAATTATTT A1C_03615 654461 - 654850 + | polypeptide deformylase TERM 533 655416 - 655436 + G 77 -7.7 -4.11484 | opp_overlap 655416 ATATTTCTAATGATA CTGTATTAT ATA ATGATACAG TTTTAGAAGCTTACC A1C_03620 655256 - 655621 + | hypothetical protein A1C_03625 656348 - 656163 - | hypothetical protein A1C_03630 658150 - 656807 - | hypothetical protein TERM 534 657650 - 657640 - G 74 -4 -5.24129 | opp_overlap 657614 GTTTTTTATAAAAAA TCAT ATA ATGA GCTATAAGAATTATC A1C_03635 658350 - 658466 + | pyruvate phosphate dikinase A1C_03640 661181 - 658545 - | pyruvate phosphate dikinase TERM 535 658656 - 658644 - G 72 -3.4 -5.15634 | opp_overlap 658653, overlap 658654 CATTCTATGAAAAAA TGCT ATAGA AGCA GGGTTTCCTGCATGT TERM 536 658667 - 658654 - G 73 -8.1 -3.55323 | opp_overlap 658653, overlap 658644 AAAAATGCTATAGAA GCAGG GTTT CCTGC ATGTTCCCCACAAGC TERM 537 658820 - 658790 - G 79 -7 -4.66609 | opp_overlap 658780, overlap 658819 GATCGGATTCAAAAA TCTTTTCTTCTAAA TAA TATGGAAGAAAAGA TGCAATATCATCTCT TERM 538 659439 - 659455 + g 76 -3.7 -5.35224 | opp_overlap 659438, overlap 659442 AGGAGCAATAATCAT TTCCCTT ACT AAAGGAA TTTTATTTTTATCAA TERM 539 660125 - 660136 + g 72 -5.8 -4.42748 | opp_overlap 660125 660124 CGGCAATATTAATAG CAGC GATG GCTG TTCTTTTTGCAGTAC TERM 540 660374 - 660363 - G 70 -4.4 -4.75372 | opp_overlap 660363 AGCATTTATTAAAAA CTCT CCAA AGAG CTTTTTTTCTCCTGT TERM 541 661209 - 661235 + H 74 -7.5 -3.91144 | opp_overlap 661208 661211 AATTTGCTAACAATT TATGTGTTTAG AAGCA TTAAACACATA TTTATACAGTATGAA TERM 542 661704 - 661686 - H 75 -7.4 -4.14392 | overlap 661690 CGGTAAGGGTGAAAA GGTACGGT AAG AGCGTACC GGTAAGTTGGTAACA TERM 543 661914 - 661960 + H 73 -8.9 -3.15249 | gap 1, opp_overlap 661958, overlap 661909 661906 661917 ACCTTATTGTCATAC CGTATCCGTATGTCATTCCTGC TTTC GCATGAATGACATACGAA-GTG TTAGTACACCATATG TERM 544 661917 - 661958 + H 93 -11.7 -3.1372 | overlap 661909 661906 661914 TTATTGTCATACCGT ATCCGTATGTCATTCCTGC TTTC GCATGAATGACATACGAAG TGTTAGTACACCATA A1C_03645 662028 - 662696 + | glutathione S-transferase A1C_03650 663408 - 662659 - | hypothetical protein TERM 545 663263 - 663277 + g 79 -7.2 -4.40237 | opp_overlap 663263 663262 AAAATAAGTAATAAG GTGTTT TGA AAACAC TTTTCCTCTATAATG A1C_03655 663602 - 663441 - | hypothetical protein A1C_03660 663484 - 664026 + | BioY family protein A1C_03665 664260 - 665549 + | folylpolyglutamate synthase TERM 546 666012 - 666002 - g 70 -8.2 -3.11988 | overlap 666001 TGGCATTCAATAAAG CCGC ATG GCGG AGGTAAGCCAAATGG A1C_03670 665708 - 666337 + | superoxide dismutase A1C_03690 667622 - 667732 + | hypothetical protein TERM 547 668080 - 668096 + F 74 -8.1 -3.65046 | overlap 668083 CTGGATTGCTTTGTC GAATTAC TGT GTAATTC TTCTTGCAATAACGA A1C_03700 668122 - 668925 + | biotin--protein ligase A1C_03705 669253 - 669089 - | hypothetical protein A1C_03710 669443 - 669718 + | hypothetical protein TERM 548 670386 - 670360 - f 70 -5.3 -4.64495 | opp_overlap 670366, overlap 670366 ATCCAACAAAAATAA TAAAAATTCTG TAAAT CAGAATTTTTT ACTGGATTGCTTCGT TERM 549 670380 - 670366 - f 82 -4.3 -5.51353 | opp_overlap 670366, overlap 670360 CAAAAATAATAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 550 670366 - 670380 + F 75 -4.3 -5.18357 | opp_overlap 670360 670366 CAAAAATAATAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG A1C_03715 670773 - 671345 + | hypothetical protein A1C_03720 671432 - 671515 + | hypothetical protein A1C_03725 671524 - 671874 + | hypothetical protein A1C_03730 672089 - 672433 + | hypothetical protein A1C_03735 672448 - 672618 + | hypothetical protein A1C_03740 672622 - 672795 + | hypothetical protein A1C_03745 672782 - 673114 + | hypothetical protein infC 673288 - 673731 + | translation initiation factor IF-3 TERM 551 673777 - 673794 + F 71 -4.9 -4.78237 | gap 1, opp_overlap 673786, overlap 673780 CTGTTGTTACATGGA TCG-GTAG AAC CTACTCGA TTTTGTTCTCGCGTA TERM 552 673897 - 673872 - f 78 -6.4 -4.77775 | opp_overlap 673872 ATTTTATAAAACAAA CATATAAAAA AAGTTA TTTTTATATG TTTTACTAAATTCCT TERM 553 673872 - 673897 + F 72 -6.4 -4.31379 | opp_overlap 673872 ATTTTATAAAACAAA CATATAAAAA AAGTTA TTTTTATATG TTTTACTAAATTCCT TERM 554 674987 - 674970 - g 79 -9.9 -2.8355 | overlap 674969 AGATAACAAATTAAC CCCTGAA GAAT TTCAGGG CGGAGGGTTTACAAT A1C_03755 674008 - 675246 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 555 675793 - 675777 - g 77 -8 -3.79113 | opp_overlap 675764 AGCGGCGGAGAAGAA GCAGCA CTTTT TGCTGC CGTACTTTTCAATAT prfA 675411 - 676478 + | peptide chain release factor 1 TERM 556 677511 - 677530 + G 75 -5 -5.10933 | opp_overlap 677511 677509 GGACTTAATGAAATA CCGAAATG TTAT CATTTAGG TTTTATTTTAGGTCC TERM 557 678338 - 678326 - g 82 -4.9 -5.37593 | overlap 678318 CCCTAAAGCAAAAAA TATTG CCG CAATA GGAACGTTAAAAACC TERM 558 678362 - 678352 - g 71 -5.4 -4.67904 | TAGGAACGTTAAAAA CCAA TAA TTGG CAAGATAATTATACT A1C_03765 676653 - 678416 + | single-stranded-DNA-specific exonuclease RecJ TERM 559 678521 - 678492 - f 71 -4.6 -4.73105 | gap 1, opp_overlap 678500, overlap 678500 ATCTAGAAAAAATAA TAAAAAAATTCTG TAAAT CAGAATTTT-TTA CTGGATTGCTTCGTT TERM 560 678514 - 678500 - f 91 -4.3 -6.04419 | opp_overlap 678500, overlap 678492 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 561 678500 - 678514 + F 75 -4.3 -5.18357 | opp_overlap 678500 678492 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTTACTGGATTG TERM 562 679912 - 679888 - g 79 -8.7 -3.82031 | opp_overlap 679888 679889 679892, overlap 679889 TGAAGCATTATTAAA CGAAGTGAAAA ACG TTTTCACTCCA TTACTTAATGCAAAT TERM 563 679911 - 679889 - g 79 -10 -2.88737 | opp_overlap 679888 679889 679892, overlap 679888 GAAGCATTATTAAAC GAAGTGAAAA ACG TTTTCACTCC ATTACTTAATGCAAA A1C_03770 678641 - 679957 + | putative methyltransferase rho 680355 - 681731 + | transcription termination factor Rho A1C_03790 682576 - 682824 + | integration host factor beta-subunit A1C_03795 682899 - 683048 + | hypothetical protein TERM 564 683099 - 683083 - f 71 -2.3 -5.37593 | overlap 683085 CTTTAAAGGAAAAAA TATCATC AAT AATGACA TATTAAAAAAAAGAA A1C_03800 683301 - 683504 + | hypothetical protein A1C_03805 683507 - 683695 + | hypothetical protein A1C_03810 683891 - 684046 + | Na+/proline symporter and signal transduction histidine kinase A1C_03815 684497 - 684577 + | hypothetical protein A1C_03820 684574 - 684702 + | microcin C7 resistance protein hemC 684699 - 685604 + | porphobilinogen deaminase A1C_03830 686738 - 685755 - | octaprenyl-diphosphate synthase TERM 565 685813 - 685825 + g 70 -4.1 -4.96388 | TAATCTTTATAAATA TTCTG AAC CGGAA TTTTATTTAATAATT TERM 566 686834 - 686816 - R 89 -10.3 -3.74416 | AAAGTACTAATAGAA CCCGTGA TCAAG TCACGGG GTGATAAATCCAGGC A1C_03835 688483 - 686828 - | hypothetical protein TERM 567 687493 - 687478 - G 71 -7.6 -3.43919 | opp_overlap 687477, overlap 687476 TGGAAAGTTTAAACA GATAGG TTTG CCTATC GTAATATTTCTTTAT A1C_03840 690015 - 688480 - | ADP,ATP carrier protein A1C_03845 691554 - 690094 - | lipopolysaccharide 1,2-glucosyltransferase RfaJ TERM 568 691699 - 691746 + H 74 -9.3 -2.80016 | opp_overlap 691699 691698, overlap 691696 CAAAAAGAACAATAG CGTGGCAATCTCAGGAGCT TTTTTATATT ATCTTATGAGATTGCCACG TCGTTGCTAGTGCAA A1C_03850 692154 - 693473 + | AmpG-related permease TERM 569 693920 - 693936 + F 83 -2.3 -5.95539 | overlap 693921 693923 CCTTAACTTGTATAT TTATATC TTG GATATGG TTTTTTTCTTTAGCA TERM 570 694151 - 694131 - g 70 -4.1 -5.03409 | opp_overlap 694131 CTATAAAAAAAATAA GTAAATATA ATT TAGATTTAC GTTATATTCATTGTC A1C_03865 694070 - 694744 + | hypothetical protein TERM 571 694928 - 694904 - g 72 -2.8 -5.3472 | overlap 694906 694909 AAAAAATAAAGAAAA TACTACCTCG GAAGA CAAGGAAGCA GCCAATCTATTATCT TERM 572 695348 - 695335 - g 74 -5.3 -4.83518 | AAGAACAATATAAAA CTCTA ATTT TAGAG AAATTAAACTATCTA A1C_03870 694728 - 695420 + | hypothetical protein TERM 573 695481 - 695494 + G 80 -5.3 -5.25906 | TACTTTAATAGAGAG CTTTG ATTC CAAAG TTTTTATTAGTTTAT A1C_03875 695413 - 696417 + | hypothetical protein TERM 574 696596 - 696550 - T 100 -11 -4.614 | gap 1, opp_overlap 696551 696562, overlap 696551 TGGAATGACATAAAA TGAGCCATGCAAC-ATAGCGC TTCGCT GCGTCATTGTTGCATGGCTCG AAAAGCCTGCTGGGT TERM 575 696595 - 696551 - T 100 -14.5 -3.36117 | gap 1, opp_overlap 696551 696562, overlap 696550 GGAATGACATAAAAT GAGCCATGCAAC-ATAGCGC TTCGCT GCGTCATTGTTGCATGGCTC GAAAAGCCTGCTGGG A1C_03880 697416 - 696697 - | hypothetical protein A1C_03885 697584 - 697850 + | DNA-damage-inducible protein J A1C_03890 697847 - 698041 + | hypothetical protein TERM 576 698088 - 698070 - T 85 -2.5 -5.99154 | TATGAAATAAAAAAA GATACAA TTATT TTATATC GAACAGGAACATATG TERM 577 698167 - 698134 - T 100 -13.5 -2.99871 | opp_overlap 698138, overlap 698138 GTTCATAGCAAATTA CAAATAGCAAATTAC TTTT GTAATTTGCTATTTA TTATGACCTAAGAAA TERM 578 698138 - 698163 + T 100 -12.1 -4.32177 | opp_overlap 698138 698134 ATAGCAAATTACAAA TAGCAAATTAC TTTT GTAATTTGCTA TTTATTATGACCTAA TERM 579 698163 - 698138 - T 100 -12.1 -4.16443 | opp_overlap 698138, overlap 698134 ATAGCAAATTACAAA TAGCAAATTAC TTTT GTAATTTGCTA TTTATTATGACCTAA A1C_03895 698615 - 698175 - | hypothetical protein A1C_03900 699254 - 698679 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 580 700031 - 700000 - g 100 -14.6 -4.287 | AAAGAAATTCTAAAA GTACCTGAACCATT AATT AGTGGTTCAGGTAC AAGAATCATGAGCTT TERM 581 700405 - 700390 - g 71 -6.8 -3.99327 | overlap 700388 TATTTATTAAAAATA CTACGC AGTG GCGCAG AAAAAGCAAGCATTA A1C_03905 699481 - 700473 + | tryptophanyl-tRNA synthetase A1C_03910 700997 - 701539 + | hydrolase or acyltransferase A1C_03915 703605 - 701788 - | aminopeptidase P TERM 582 702288 - 702298 + g 83 -6.8 -4.93296 | GTCCTTTAAGTACTT GCGT ATA ACGC TTTTTCTGCTCATCA TERM 583 703113 - 703076 - G 84 -10 -3.4072 | gap 1, opp_overlap 703075 TATTGCTCATTATAA TTACTG-GATCCCGCGG TCAAG CCGCGGGATGACAATAA GGTTTTACGACATTT A1C_03920 704998 - 703652 - | putrescine-ornithine antiporter TERM 584 703967 - 703955 - G 73 -7.7 -3.70919 | CGTAAAGGCTAATAA TGGCA CAA TGCCA AGGCAACTTAGAATA TERM 585 704636 - 704616 - G 100 -7.5 -5.47218 | TGTGATTGAAAAAAA GGCGTTAGA TAA CCTATCGCC GAAATGACCACTATA TERM 586 705070 - 705047 - R 81 -8.3 -4.05678 | TTTCTAAACAAAAGA TTGATAGCT TTTTTT AGCTATCAA AAATAATCTTAGGAG A1C_03925 705620 - 705357 - | hypothetical protein A1C_03930 705790 - 705617 - | hypothetical protein A1C_03935 706040 - 705816 - | hypothetical protein A1C_03940 706391 - 706206 - | hypothetical protein A1C_03945 706504 - 706397 - | hypothetical protein A1C_03950 706998 - 706666 - | Iron-sulfur cluster assembly accessory protein A1C_03955 707397 - 707002 - | scaffold protein A1C_03960 708723 - 707491 - | cysteine desulfurase A1C_03965 709881 - 708766 - | hypothetical protein TERM 587 708796 - 708811 + g 77 -7.6 -4.09509 | opp_overlap 708796, overlap 708802 ATACACTTCCTCAAA GGCTTT TATA AAAGCC TTTATATCACTTACT TERM 588 708811 - 708796 - G 71 -7.6 -3.5525 | opp_overlap 708796 708802 ATACACTTCCTCAAA GGCTTT TATA AAAGCC TTTATATCACTTACT A1C_03970 710264 - 709878 - | Iron-sulfur cluster assembly transcription factor IscR A1C_03975 711695 - 710823 - | hypothetical protein A1C_03980 712649 - 712536 - | NTPase TERM 589 713995 - 714007 + G 72 -3.4 -5.17353 | GATGATCGGAATTCC TCCT CTCAC AGGA TTTTTTGGTAAATAT TERM 590 714089 - 714099 + G 71 -3.2 -5.29716 | overlap 714085 GGTATTTTTACCAGC GTAG TTG CTGC TTTTTATTATCTTAA A1C_03985 712868 - 714244 + | NADH dehydrogenase subunit N A1C_03990 715772 - 714231 - | hypothetical protein TERM 591 715393 - 715382 - G 86 -7.2 -4.8667 | TAGACCCCATAAAAA GCGG TCTA CCGC CATCCTTTCTAAACC A1C_03995 716859 - 715867 - | delta-aminolevulinic acid dehydratase A1C_04000 719358 - 717412 - | primosome assembly protein PriA A1C_04005 719426 - 719992 + | aromatic acid decarboxylase TERM 592 720107 - 720077 - f 80 -10 -3.31603 | opp_overlap 720084, overlap 720084 ATCCAGAAAAATAAC TAAAAAATACTAAC ATT GTTAGTATTTTTAA CTGGGTCCTGTGAAT TERM 593 720100 - 720084 - f 95 -8.1 -5.43514 | opp_overlap 720084, overlap 720077 AAAATAACTAAAAAA TACTAAC ATT GTTAGTA TTTTTAACTGGGTCC TERM 594 720084 - 720100 + F 85 -8.1 -4.67353 | opp_overlap 720084 720077 AAAATAACTAAAAAA TACTAAC ATT GTTAGTA TTTTTAACTGGGTCC A1C_04010 720179 - 721663 + | replicative DNA helicase TERM 595 721792 - 721806 + T 73 -5.8 -4.65895 | opp_overlap 721792 AATACAACTTTACAA TACTAA ATT TTAGTA TTTTTAACTGGACCC A1C_04015 722368 - 722162 - | putative to amino acid permeases A1C_04020 722720 - 722481 - | putative to amino acid permeases TERM 596 723720 - 723709 - g 77 -4.4 -5.1383 | opp_overlap 723709 AATAATATACAAAAA CCAA GGCT TTGG ATTTATTATAAGCCT A1C_04025 723529 - 724218 + | ribosomal large subunit pseudouridine synthase TERM 597 724462 - 724426 - g 77 -8.2 -3.80877 | overlap 724424 CTAGCTTAGAAAATA TGGAAATTAACACAGA TTTAG TCAATGCTAATTTCCA AGGTACAATATTAAC A1C_04030 724269 - 727133 + | hypothetical protein A1C_04035 727138 - 727716 + | N6-adenine-specific methylase TERM 598 729027 - 729016 - g 83 -5.8 -5.24796 | GTGAGATAAGAAAAA CTGC AAAA GCAG AAACAAGAATAAAAG A1C_04040 727815 - 729155 + | DNA repair protein RadA A1C_04045 729152 - 729469 + | hypothetical protein TERM 599 729513 - 729497 - f 81 -3.7 -5.62552 | opp_overlap 729506 AAAAAAATTAAAAAA GACTG GATACCG CAGTC AATCCGCGGTATGAT recO 729544 - 730257 + | DNA repair protein RecO TERM 600 730366 - 730320 - f 100 -20.6 -3.19389 | opp_overlap 730328, overlap 730324 GAAGTGATTGACGAA GCAATCCAGTTAAAAATGCTAT TCT ATATCATTTCTAACTGGATTGC CACGCAGCCTACGGC TERM 601 730362 - 730324 - f 100 -14.2 -3.40867 | opp_overlap 730328, overlap 730320 TGATTGACGAAGCAA TCCAGTTAAAAATGCTAT TCT ATATCATTTCTAACTGGA TTGCCACGCAGCCTA TERM 602 730371 - 730383 + F 76 -9.1 -3.17723 | AACTGGATTGCCACG CAGCC TAC GGCTG TTCAGTTCACAATGA A1C_04055 730469 - 731155 + | putative glycoprotein endopeptidase TERM 603 731168 - 731143 - T 71 -4.8 -4.74453 | opp_overlap 731143 731141 TAAGATAGCTAAAAA GGATAAGCTT TAAAAG AATCTTATCC TCTTTAATTGGGCCT A1C_04060 732217 - 731189 - | hypothetical protein TERM 604 732425 - 732452 + r 78 -10.6 -2.8001 | TGCATGGCTCGTTTA TGTCATCCCTGC AAAA GCGGGAATGACA TATAATAAAAATTCT infB 734958 - 732469 - | translation initiation factor IF-2 TERM 605 732591 - 732608 + g 72 -5.7 -4.4518 | CTTCTTTAACTTCAT CTTTAAA GCGT TTTAAAG TTTTGAGTTTTCCTT TERM 606 733074 - 733052 - G 72 -8.6 -3.03243 | opp_overlap 733052 733055 ACTGACCCTTGAACA TCACCTTTAA TAA TTAAAGGTAA TTCCTTAATTTTACT TERM 607 734808 - 734794 - G 71 -8.6 -2.95652 | overlap 734793 TTGATTTAATGAAAT GGTAGT AGT ACTACC GGTAGAGCTTTTTCT nusA 736723 - 735212 - | transcription elongation factor NusA A1C_04075 737313 - 736813 - | hypothetical protein TERM 608 737352 - 737336 - R 100 -9.4 -5.55769 | GTTTATAACAAAAAA GGTGGG ATAAA CCCACC TACCTATAATTTTTA TERM 609 737450 - 737462 + r 75 -4.9 -5.07011 | TGTCTAAGAGGCTTA TTGTA CAG TACAA TTTTTACTTTATATC A1C_04080 738042 - 737653 - | Fic TERM 610 737683 - 737695 + g 78 -2 -5.85178 | GTTGCTCTCTGTTTT TTCA ATACA TGAA TTTTTTTTGCATCTT TERM 611 738124 - 738104 - R 72 -8.3 -3.34043 | GTTACGAGTCTATAA TGAGCTTCC TAT GCAAGCTCA ACCTGATGAATATTT A1C_04085 738204 - 738112 - | hypothetical protein A1C_04090 739386 - 738643 - | hemolysin A A1C_04095 740785 - 739550 - | tyrosyl-tRNA synthetase A1C_04100 741069 - 740902 - | hypothetical protein A1C_04105 742192 - 741824 - | hypothetical protein TERM 612 742062 - 742075 + g 74 -5.3 -4.84182 | ATATAATGCTTAGTA GTAGA AATA TCTAC TTTATTATTTTTTAG A1C_04110 742532 - 742194 - | hypothetical protein A1C_04115 743762 - 742836 - | hypothetical protein A1C_04120 743875 - 744666 + | hypothetical protein A1C_04125 744676 - 745521 + | ribonuclease D A1C_04130 746091 - 745747 - | 5-formyltetrahydrofolate cyclo-ligase A1C_04135 747638 - 746259 - | dihydrolipoamide dehydrogenase A1C_04140 748466 - 747786 - | biotin synthesis protein BioC A1C_04145 748867 - 748646 - | hypothetical protein A1C_04150 749601 - 749086 - | hypothetical protein A1C_04155 750520 - 749699 - | hypothetical protein TERM 613 750460 - 750402 - G 95 -12.7 -2.74701 | gap 1, opp_overlap 750410 750411, overlap 750454 ATAGTGTTAACATCA TCCCTACACTCTTCTATGTCATTCCCGC TTCC GCGGGAATGACATAGGAAAATTT-GGCA CAATTCCCAAACCAT TERM 614 750410 - 750453 + g 100 -16.2 -3.55622 | opp_overlap 750402, overlap 750411 AACATCATCCCTACA CTCTTCTATGTCATTCCCGC TTCC GCGGGAATGACATAGGAAAA TTTGGCACAATTCCC TERM 615 750411 - 750452 + g 100 -19.7 -2.73159 | opp_overlap 750402, overlap 750410 ACATCATCCCTACAC TCTTCTATGTCATTCCCGC TTCC GCGGGAATGACATAGGAAA ATTTGGCACAATTCC A1C_04160 751499 - 751326 - | hypothetical protein A1C_04165 751949 - 751554 - | hypothetical protein A1C_04170 752054 - 752179 + | 50S ribosomal protein L36 TERM 616 752874 - 752848 - g 80 -6.1 -4.7657 | gap 1, opp_overlap 752856, overlap 752849 752851 752866 GAAAAAGCTGAAAAA TTACTAAAGCTT GTAG AAGCTTTAG-AA GAAAGCGACGATGTA TERM 617 752874 - 752849 - g 71 -7.7 -3.44315 | opp_overlap 752856, overlap 752848 752851 752866 AAAAAGCTGAAAAAT TACTAAAGCTT GTAG AAGCTTTAGAA GAAAGCGACGATGTA TERM 618 752872 - 752851 - g 83 -10.3 -3.26839 | opp_overlap 752856, overlap 752848 752849 752866 AAAGCTGAAAAATTA CTAAAGCTT GTAG AAGCTTTAG AAGAAAGCGACGATG A1C_04175 752197 - 752955 + | hypothetical protein A1C_04180 752952 - 753698 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 619 754339 - 754311 - f 74 -7.5 -3.95787 | opp_overlap 754313 754319, overlap 754319 GATTACATTTATAAA GTCTAAAAGCTTT TAC AAAGCTTTTTGTC TACTAATTACCTCAT TERM 620 754313 - 754337 + F 71 -8.7 -2.8664 | opp_overlap 754311 754319, overlap 754319 TTACATTTATAAAGT CTAAAAGCTTT TAC AAAGCTTTTTG TCTACTAATTACCTC TERM 621 754319 - 754331 + F 81 -6.3 -5.01497 | opp_overlap 754311 754319, overlap 754313 TTATAAAGTCTAAAA GCTTT TAC AAAGC TTTTTGTCTACTAAT TERM 622 754331 - 754319 - f 72 -6.3 -4.26189 | opp_overlap 754319 754313, overlap 754311 TTATAAAGTCTAAAA GCTTT TAC AAAGC TTTTTGTCTACTAAT A1C_04190 754483 - 754638 + | isopentenyl pyrophosphate isomerase A1C_04195 755969 - 754941 - | isopentenyl pyrophosphate isomerase TERM 623 756038 - 756055 + H 82 -7.1 -4.84492 | AAAATATATTTAGTA TTACCTT AAAC AAGGTAA TTTTATTGTCATTCC A1C_04200 756146 - 756304 + | acetyltransferase A1C_04205 756408 - 756839 + | ankyrin repeat-containing protein A1C_04210 756887 - 756958 + | hypothetical protein A1C_04215 757128 - 756985 - | hypothetical protein TERM 624 757078 - 757092 + g 74 -8.6 -3.34104 | TACAATATCTTCAGA CGTTAC GCT GTAACG TTCATGTGCTTGTGC TERM 625 757200 - 757216 + H 78 -9.5 -3.2614 | AAAAACCGCAGCCTC CATTCCA AGT TGGAATG TTGCTATCAAGCGTA A1C_04220 757465 - 757683 + | hypothetical protein A1C_04225 757889 - 757686 - | acetyltransferase A1C_04230 758300 - 757986 - | acetyltransferase TERM 626 759272 - 759284 + r 76 -9.1 -3.21218 | TTCTGGATTGCCACA GCCAC TTC GTGGC TTCGTAATGACGAAT clpP 759931 - 759326 - | ATP-dependent Clp protease proteolytic subunit TERM 627 760059 - 760073 + r 78 -4.3 -5.43514 | opp_overlap 760059, overlap 760052 CAATCTAGTCAAAAA TTCTG TACAT CAGAA TTTTTTAATTATTTT rpsA 761881 - 760175 - | 30S ribosomal protein S1 TERM 628 761070 - 761088 + g 74 -3.8 -5.14965 | TCAAGTTGTTTTATA CCAAGTGA TAT TCTTTTGG TTTTTTCATCAAACT TERM 629 762003 - 761987 - R 74 -8.1 -3.66732 | overlap 761990 CAATCATTGCAATAA GAATTAC GTA GTAATTC GACGAAGTAATCCAG TERM 630 762006 - 762060 + r 100 -26.2 -3.72073 | opp_overlap 762010 762014 762023 762026, overlap 762006 762023 762026 TACGTAGTAATTCGA CGAAGTAATCCAGTAAAGAATGCTAA AAA TTAGCATTCTTTACTGGATTACCGCG TTCCTTTTAGTCACT TERM 631 762056 - 762010 - R 100 -28.6 -3.19157 | opp_overlap 762006 762006 762023 762026, overlap 762014 762023 762026 TAGTAATTCGACGAA GTAATCCAGTAAAGAATGCTAA AAA TTAGCATTCTTTACTGGATTAC CGCGTTCCTTTTAGT TERM 632 762052 - 762014 - R 100 -23.6 -3.40639 | opp_overlap 762006 762006 762023 762026, overlap 762010 762023 762026 AATTCGACGAAGTAA TCCAGTAAAGAATGCTAA AAA TTAGCATTCTTTACTGGA TTACCGCGTTCCTTT TERM 633 762043 - 762023 - R 95 -11.3 -3.80516 | opp_overlap 762023 762006 762006 762026, overlap 762014 762010 762026 AAGTAATCCAGTAAA GAATGCTAA AAA TTAGCATTC TTTACTGGATTACCG TERM 634 762023 - 762043 + r 95 -11.3 -3.794 | opp_overlap 762014 762010 762023 762026, overlap 762006 762006 762026 AAGTAATCCAGTAAA GAATGCTAA AAA TTAGCATTC TTTACTGGATTACCG TERM 635 762040 - 762026 - R 74 -7.2 -4.02571 | opp_overlap 762026 762023 762006 762006, overlap 762023 762014 762010 TAATCCAGTAAAGAA TGCTAA AAA TTAGCA TTCTTTACTGGATTA TERM 636 762026 - 762040 + r 74 -7.2 -4.02571 | opp_overlap 762023 762014 762010 762026, overlap 762023 762006 762006 TAATCCAGTAAAGAA TGCTAA AAA TTAGCA TTCTTTACTGGATTA cmk 762802 - 762143 - | cytidylate kinase TERM 637 762888 - 762944 + r 78 -9.7 -3.10677 | opp_overlap 762891 762892 762894, overlap 762891 TAGATATAGAGTTTA AAATTATTAGAGCCTATCAGTAATTAA AAT TTATTTACTGATAGGCTCTAAGGGTGA TTAGCTCAGTTGGTT TERM 638 762891 - 762941 + r 100 -15.8 -2.76189 | opp_overlap 762891 762892 762894, overlap 762888 ATATAGAGTTTAAAA TTATTAGAGCCTATCAGTAATTAA AAT TTATTTACTGATAGGCTCTAAGGG TGATTAGCTCAGTTG TERM 639 762941 - 762891 - R 100 -11.4 -4.18802 | opp_overlap 762888 762891, overlap 762892 762894 ATATAGAGTTTAAAA TTATTAGAGCCTATCAGTAATTAA AAT TTATTTACTGATAGGCTCTAAGGG TGATTAGCTCAGTTG TERM 640 762940 - 762892 - R 100 -14.9 -3.10558 | opp_overlap 762891 762888, overlap 762891 762894 TATAGAGTTTAAAAT TATTAGAGCCTATCAGTAATTAA AAT TTATTTACTGATAGGCTCTAAGG GTGATTAGCTCAGTT TERM 641 762938 - 762894 - R 100 -21.9 -3.10545 | opp_overlap 762891 762888, overlap 762892 762891 TAGAGTTTAAAATTA TTAGAGCCTATCAGTAATTAA AAT TTATTTACTGATAGGCTCTAA GGGTGATTAGCTCAG A1C_04250 763656 - 763363 - | transposase Tn5 A1C_04255 763928 - 763779 - | transposase Tn5 A1C_04260 765272 - 764964 - | hypothetical protein TERM 642 765123 - 765153 + g 100 -13.6 -3.33171 | opp_overlap 765120, overlap 765116 TATAGCAATAATTGG TATGCAGATTGTAT CAC ATACAATCTGTATA TTCATAGTTGTTGGA A1C_04265 765666 - 765370 - | hypothetical protein A1C_04270 765704 - 766015 + | hypothetical protein TERM 643 766202 - 766217 + T 91 -5.4 -5.69793 | overlap 766204 ATTAACAATATTTTT TGCCAG AGAT CTGGTA TTTTTTATTTAATAT TERM 644 766204 - 766215 + T 71 -5.8 -4.47052 | overlap 766202 TAACAATATTTTTTG CCAG AGAT CTGG TATTTTTTATTTAAT A1C_04275 766805 - 766674 - | hypothetical protein A1C_04280 767339 - 767434 + | hypothetical protein A1C_04285 767434 - 767568 + | hypothetical protein A1C_04290 767600 - 767683 + | hypothetical protein A1C_04295 767744 - 767881 + | hypothetical protein A1C_04300 767973 - 768101 + | hypothetical protein A1C_04305 768141 - 768359 + | transposase, mutator type A1C_04310 768858 - 769121 + | transposase A1C_04315 769331 - 769137 - | transposase IS200-family protein TERM 645 770360 - 770376 + H 76 -3.8 -5.47914 | opp_overlap 770360, overlap 770353 GTATCCAGTTAAAAA TACTAA AATTA TTAGTA TTTTTTATCGTTTTT TERM 646 770945 - 770927 - H 71 -7.6 -3.53563 | opp_overlap 770930, overlap 770930 ATATTCTTGTCCAAA TAACAAAA AAA TTTTGTTA AATATTGGAAAAAAT TERM 647 771796 - 771780 - g 71 -6.7 -3.96449 | opp_overlap 771787, overlap 771787 771789 TAAGATGCCAAATAA TATAAGA TAT TCTTATA AAGAAAATGTATTAA TERM 648 773195 - 773211 + G 77 -8.1 -3.86252 | ATGATGCCTTAACCG GCTTATA TAA TATAAGC TTATATTTAGTAGGA A1C_04320 771031 - 776712 + | large extracellular alpha-helical protein A1C_04325 778975 - 776810 - | 3-hydroxyacyl-CoA dehydrogenase FadB A1C_04330 779423 - 779229 - | hypothetical protein A1C_04335 780403 - 779804 - | hypothetical protein A1C_04340 780728 - 780372 - | hypothetical protein TERM 649 780570 - 780593 + gr 72 -2.4 -5.43974 | gap 1, opp_overlap 780577 ATCAAGCACCTTATC GGCAATACCAA GAT TTGG-GGTGCC TTTTTCTTTAATTTT A1C_04345 781004 - 780834 - | 2-octaprenyl-6-methoxyphenyl hydroxylase A1C_04350 782490 - 781354 - | 2-octaprenyl-6-methoxyphenyl hydroxylase A1C_04355 782737 - 782471 - | putative monovalent cation/H+ antiporter subunit F TERM 650 782896 - 782867 - H 70 -8.6 -2.53715 | gap 1, overlap 782866 TTTATTAGTAGCAAC TG-GACCCCGTGG TCAAG CCACGGGGTGACA CAGCAAAGCACTAGG A1C_04360 783159 - 784586 + | nitrogen assimilation regulatory protein NtrX A1C_04365 784579 - 786324 + | hypothetical protein TERM 651 786411 - 786446 + T 78 -6.5 -4.82901 | gap 1, opp_overlap 786421, overlap 786415 786421 TGACCACACGGCATC CAGTTAAAAATGCTAA AATTA TTAGCATTTTT-ATTG TTTTTATGGACCCCC TERM 652 786415 - 786443 + T 100 -10.6 -4.52873 | opp_overlap 786421, overlap 786411 786421 CACACGGCATCCAGT TAAAAATGCTAA AATTA TTAGCATTTTTA TTGTTTTTATGGACC TERM 653 786421 - 786437 + T 86 -5.2 -5.51353 | opp_overlap 786421, overlap 786415 786411 GCATCCAGTTAAAAA TGCTAA AATTA TTAGCA TTTTTATTGTTTTTA TERM 654 786437 - 786421 - T 70 -5.2 -4.67353 | opp_overlap 786421 786415 786411 GCATCCAGTTAAAAA TGCTAA AATTA TTAGCA TTTTTATTGTTTTTA A1C_04370 787578 - 786580 - | hypothetical protein TERM 655 786984 - 787001 + g 74 -4.1 -5.13527 | opp_overlap 786984 786987, overlap 786987 TTTCTTTTATAATAT TAACTGC AGGC GCAGCTA TTTTCTTTATTCCTT A1C_04375 787989 - 787837 - | hypothetical protein A1C_04380 788694 - 788080 - | ankyrin repeat-containing protein A1C_04385 790901 - 789117 - | penicillin-binding protein TERM 656 790199 - 790216 + g 70 -6.3 -4.22009 | TATCTTTACCAGCTT TAGTAGG GGTT CCTGCTA TTTCTCTTACCTGCT A1C_04390 791412 - 790891 - | hypothetical protein A1C_04395 793462 - 791777 - | penicillin-binding protein A1C_04400 794011 - 793613 - | cell division protein FtsL TERM 657 794229 - 794205 - R 74 -8.6 -3.26101 | overlap 794203 794202 794207 AAAAATAATAAATTA GATACCGCGA TCAAG TCGCGGTATG ACAAAGTACTTGATT TERM 658 794227 - 794207 - R 91 -11.2 -3.15458 | overlap 794205 794203 794202 AAATAATAAATTAGA TACCGCGA TCAAG TCGCGGTA TGACAAAGTACTTGA mraW 795215 - 794295 - | S-adenosyl-methyltransferase MraW A1C_04410 795664 - 795215 - | cell division protein MraZ TERM 659 795747 - 795774 + H 100 -14.4 -4.20918 | opp_overlap 795747 795749 795751 795754 CAAGCGTTTTTAACA GACAGAAGTTAA ATTA TTAACTTCTGTC TTTATTGCCATTGCG TERM 660 795774 - 795747 - H 100 -14.4 -3.02461 | opp_overlap 795747, overlap 795749 795751 795754 CAAGCGTTTTTAACA GACAGAAGTTAA ATTA TTAACTTCTGTC TTTATTGCCATTGCG TERM 661 795772 - 795749 - H 91 -11.2 -3.06815 | opp_overlap 795747, overlap 795747 795751 795754 AGCGTTTTTAACAGA CAGAAGTTAA ATTA TTAACTTCTG TCTTTATTGCCATTG TERM 662 796386 - 796411 + G 71 -8.3 -3.2964 | overlap 796391 AATATTTGCAAGCTC TGTCGGAGGTG CTAC CACTTTCGGCA TTATGGAAAAGGTTT A1C_04415 796216 - 797625 + | Sodium/pantothenate symporter A1C_04420 797847 - 798023 + | antitoxin of toxin-antitoxin system StbD A1C_04425 798086 - 798316 + | toxin of toxin-antitoxin system uvrC 800311 - 798356 - | excinuclease ABC subunit C TERM 663 798514 - 798528 + g 78 -5.8 -4.83615 | CTACGCCCTCTATGT TATCAA GGC TTGATA TTTTTATAGCACGTG TERM 664 799338 - 799365 + g 73 -8 -3.53343 | TCTATCATATTCTCT TTATCATTAATT TCAT GATTAATGATAA TTTCCGCAGGCACTT TERM 665 800030 - 800041 + g 71 -3 -5.28481 | opp_overlap 800030 AAGAAGAATATTAAA TTTC GGCT GAAA TTTTTTGATTAGCTG A1C_04435 800937 - 800407 - | hypothetical protein A1C_04440 801280 - 801086 - | hypothetical protein A1C_04455 802302 - 802598 + | hypothetical protein A1C_04460 802591 - 802701 + | hypothetical protein TERM 666 802752 - 802728 - T 100 -13.1 -3.42366 | opp_overlap 802728, overlap 802720 TCTAAAATTCTACAA TAGCGAATTAT GCA ATAATTCGCTA TTTGTTTGATTTATG TERM 667 802728 - 802752 + T 100 -13.1 -4.65182 | opp_overlap 802728 802720 TCTAAAATTCTACAA TAGCGAATTAT GCA ATAATTCGCTA TTTGTTTGATTTATG A1C_04465 803554 - 803291 - | hypothetical protein A1C_04470 804171 - 803956 - | hypothetical protein A1C_04475 804907 - 804359 - | ankyrin repeat-containing protein TERM 668 804727 - 804771 + g 74 -9.5 -2.67365 | opp_overlap 804719 804716 804727, overlap 804719 804726 804724 CTAACCATGCAGCAA CTTTTACTGCATTATTTGAAG ATT CTGAAAATAATGCAGTAGTAG ATATTGTTCGTAATT A1C_04480 805078 - 804983 - | hypothetical protein A1C_04485 808269 - 805549 - | preprotein translocase subunit SecA A1C_04490 808520 - 809368 + | protein export protein prsA precursor TERM 669 809484 - 809508 + T 77 -7.4 -4.30978 | opp_overlap 809480 809484 ATTTAATAAAATCAA TCTATAAAAA TAAGT TTTTTATAGA TTTTACTGGATTCCA TERM 670 809508 - 809484 - T 71 -7.4 -3.82864 | opp_overlap 809484, overlap 809480 ATTTAATAAAATCAA TCTATAAAAA TAAGT TTTTTATAGA TTTTACTGGATTCCA acpS 810005 - 809625 - | 4'-phosphopantetheinyl transferase rpoZ 810389 - 810006 - | DNA-directed RNA polymerase subunit omega A1C_04505 811818 - 810559 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 671 811955 - 811923 - R 83 -6.6 -5.08169 | opp_overlap 811927, overlap 811911 811927 ACATATTTGAAAAAA TAAACATATAAAAA ACTTG TTTTTATATGTTTT ACTGGATTCCCGCTT TERM 672 811951 - 811927 - R 86 -7.4 -5.05153 | opp_overlap 811927, overlap 811923 ATTTGAAAAAATAAA CATATAAAAA ACTTG TTTTTATATG TTTTACTGGATTCCC TERM 673 811927 - 811951 + r 77 -7.4 -4.30978 | opp_overlap 811927 811923 ATTTGAAAAAATAAA CATATAAAAA ACTTG TTTTTATATG TTTTACTGGATTCCC gyrB 814581 - 812158 - | DNA gyrase subunit B A1C_04515 814806 - 815666 + | HAD family hydrolase TERM 674 816342 - 816330 - f 72 -7.7 -3.70438 | opp_overlap 816329 816330, overlap 816318 AAACTATTAGGTAAA TAGGC CAT GCCTA ATTTCAATATATTTA TERM 675 817123 - 817099 - g 89 -11.7 -3.16881 | opp_overlap 817106, overlap 817106 TAGGTAGCGTATCAA TCGATAATATA ATT TATATTATCGA AGAACAAGCCGGAAA A1C_04520 816336 - 817706 + | magnesium transporter TERM 676 817776 - 817762 - T 73 -8.6 -3.06885 | AATTTAAAGGAGACA TGGCAA TGC TTGCCA CTGCAACGTACATAG TERM 677 817907 - 817891 - T 85 -3.8 -5.80727 | opp_overlap 817891 AAAAACAATAAAAAA TACTAA TAATT TTAGTA TTTTTACTAGATCCA A1C_04525 818317 - 818072 - | hypothetical protein A1C_04540 819320 - 819015 - | proline/betaine transporter TERM 678 820592 - 820630 + r 80 -7 -4.82901 | opp_overlap 820602, overlap 820602 CTTGACAACGGTATC CAGTTAAAAATACTAAAA TTA TTATAGTATTTTTTATTG TTTTTATGGACCACG TERM 679 820602 - 820620 + r 83 -3.2 -5.80727 | opp_overlap 820602, overlap 820592 GTATCCAGTTAAAAA TACTAAAA TTA TTATAGTA TTTTTTATTGTTTTT TERM 680 821342 - 821358 + r 81 -8.1 -4.11216 | overlap 821345 CTGGATTGCTTCGTT GAATTAC TAC GTAATTC TTTTCGCAATGACGG yajC 821574 - 821488 - | preprotein translocase subunit YajC TERM 681 821760 - 821778 + G 70 -4.6 -4.91573 | TCAGGGTTAACAAGC TTAATACC TAT GGTTTTAA TTTTTGCTGTATTTT A1C_04560 821649 - 822077 + | preprotein translocase subunit YajC secD 822061 - 823617 + | preprotein translocase subunit SecD TERM 682 823755 - 823745 - f 72 -4 -5.04987 | AAGATTTTTAAAAAA CTTT TTT AAAG GGCGCTTTACGCTGG TERM 683 823902 - 823888 - g 73 -4.4 -5.00846 | CAAATATTATAAAAA TAATTA TCG TAATTA GCTTGTTAATAGGAG TERM 684 824183 - 824173 - g 70 -4 -4.93454 | TAAATAAACACAAAA TAGA TAT TCTA CCTATTTTTATCACT A1C_04570 823860 - 824477 + | sco2 protein precursor A1C_04575 824579 - 824965 + | cytochrome c-type biogenesis protein CcmE TERM 685 824957 - 824974 + F 76 -9.9 -2.79915 | opp_overlap 824952 824970, overlap 824972 GAAAATTACAGACCT CCGAGTT AAAG AACTCGG TGTCATACCGTGGCT TERM 686 825003 - 825037 + F 73 -6 -4.67353 | opp_overlap 825011, overlap 825005 825011 CTTGACCACGGTATC CATAAAAACAACTT AAAACAC AAGTTGTTTTTATA TTTTTAACTAGATGA TERM 687 825005 - 825035 + F 82 -8.6 -3.95214 | opp_overlap 825011, overlap 825003 825011 TGACCACGGTATCCA TAAAAACAACTT AAAACAC AAGTTGTTTTTA TATTTTTAACTAGAT TERM 688 825011 - 825029 + F 74 -3.2 -5.36364 | opp_overlap 825011, overlap 825005 825003 CGGTATCCATAAAAA CAACTT AAAACAC AAGTTG TTTTTATATTTTTAA TERM 689 825365 - 825352 - g 71 -8.1 -3.21934 | opp_overlap 825351 825349 825352, overlap 825351 GGTCGGTTATAAAAT GCCGA GCAG TCGGC GTATTAATGATGGAA A1C_04580 825093 - 825614 + | inorganic pyrophosphatase TERM 690 825688 - 825665 - f 81 -8.4 -4.2828 | opp_overlap 825665 CGGTATCCAGTAAAA CATATAAAAA TTTA TTTTTATATG TTTATTCTATCAAGC TERM 691 825665 - 825688 + F 85 -8.4 -4.38927 | opp_overlap 825665 CGGTATCCAGTAAAA CATATAAAAA TTTA TTTTTATATG TTTATTCTATCAAGC TERM 692 827028 - 827048 + G 71 -7.7 -3.56643 | overlap 827031 AATTAATACCGATAT GAATCTATT ATT AATGGATTC TTTGAAACATATCGG TERM 693 827153 - 827139 - g 74 -5.7 -4.66746 | TACAAAACAAAATAA GCTTC ATATA GAAGC CGGTATAAAACTTTT A1C_04585 825847 - 827370 + | virulence factor mviN TERM 694 827481 - 827491 + G 70 -8.2 -2.9936 | overlap 827480 GAATTATAGGTCGCA CGGC TAT GCCG ATATTTTGCTTTTTT A1C_04590 827351 - 828097 + | F pilin acetylation protein TraX A1C_04595 828171 - 828773 + | hypothetical protein TERM 695 829491 - 829475 - T 81 -8.1 -4.03806 | AATTAAATTGAGAAA TACTGTT ACC AACAGTA CATACAGAATAAAAA A1C_04600 831858 - 829627 - | ATP-dependent DNA helicase RecG TERM 696 831183 - 831204 + g 81 -2.9 -5.77632 | overlap 831172 CCTGTGTCATCCCGC GACTTGAGC GCGG GATCCAGTC TTTTTTTATGCTTTT A1C_04605 832429 - 832563 + | hypothetical protein TERM 697 832668 - 832624 - T 100 -12.6 -3.22884 | gap 1, opp_overlap 832618, overlap 832628 GCACCAATTGACGAA GCAATCCAGTAAAATATAGCA TTTT TACTAT-TTTTACTGGATTAC CACGCTCCTTTTAGT TERM 698 832664 - 832628 - T 81 -9.8 -3.41581 | gap 1, opp_overlap 832618, overlap 832624 CAATTGACGAAGCAA TCCAGTAAAATATAGCA TTTT TACTAT-TTTTACTGGA TTACCACGCTCCTTT A1C_04610 833955 - 832750 - | hypothetical protein TERM 699 833107 - 833093 - G 70 -4.3 -4.92757 | TTATCAACAACAAAA TGGTT AACTA AACCA CGCTCTAAACCGTAT A1C_04615 834114 - 834335 + | succinyl-CoA:3-ketoacid-coenzyme A transferase A1C_04620 834332 - 834415 + | succinyl-CoA:3-ketoacid-coenzyme A transferase A1C_04625 834567 - 834812 + | hypothetical protein A1C_04650 837949 - 836378 - | Actin polymerization protein RickA mraY 836934 - 837068 + | phospho-N-acetylmuramoyl-pentapeptide-transferase A1C_04660 839178 - 838033 - | phospho-N-acetylmuramoyl-pentapeptide-transferase A1C_04665 840607 - 839258 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase murE 842191 - 840749 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 700 841820 - 841834 + g 77 -4.2 -5.42259 | opp_overlap 841806, overlap 841807 CTCTACACCTATCGT GCCG ATAGATG CGGC TTTTTTTCCAAGTAA TERM 701 842246 - 842230 - R 72 -8.1 -3.31144 | overlap 842233 CTGTCATTGCGAGAA GAATTAC GTA GTAATTC GACACAGCAATCCAG A1C_04675 845749 - 842384 - | transcription-repair coupling factor TERM 702 843849 - 843829 - G 76 -6.1 -4.57353 | opp_overlap 843828, overlap 843831 GTTGACTACATAAAA TAGTCGTCG GTA CAACGACTG CTACTTGAGGTAAAT TERM 703 843847 - 843831 - G 79 -8.7 -3.89814 | opp_overlap 843828, overlap 843829 TGACTACATAAAATA GTCGTCG GTA CAACGAC TGCTACTTGAGGTAA A1C_04680 846024 - 845761 - | hypothetical protein TERM 704 845990 - 846004 + g 76 -3.6 -5.41941 | overlap 845991 CTACGGTAAAAAAGT TTCTTT TGT AAAGAG TTTTTATTTAATTTA TERM 705 846145 - 846156 + H 70 -5.8 -4.32857 | TTAATAGGATTTTTA CAGC AATA GCTG TTTCTATTTCAAAAA A1C_04685 846344 - 846715 + | hypothetical protein dnaA 846716 - 848107 + | chromosomal replication initiation protein A1C_04695 848589 - 848254 - | hypothetical protein TERM 706 848547 - 848573 + g 71 -9 -2.59431 | overlap 848542 GAAAAAACTCCTGAG TTGATAAAAATA TAC TATTTTTGTCAA TAAGTTCTAGAAACA A1C_04700 848841 - 848626 - | hypothetical protein A1C_04705 849082 - 848849 - | hypothetical protein TERM 707 849455 - 849472 + H 77 -9.9 -2.93747 | GTGTAATTTTCCTTG GCTCTTC CTCA GAAGAGC TATCTAAGATTTCAT A1C_04710 850045 - 851553 + | patatin-like phospholipase TERM 708 851760 - 851775 + T 71 -3.2 -5.24796 | overlap 851761 CGATTCCTATCTTTA ATCAGG AACA CCTGAC TTTTTCTTATATAAA A1C_04715 852980 - 851757 - | bicyclomycin resistance protein TERM 709 852295 - 852281 - G 72 -3.6 -5.1356 | TTGTATCAATAAAAA TAAAAG GAG CTTCTA TGAAAAAACCATAAT TERM 710 852956 - 852939 - G 74 -6.3 -4.48317 | TGATAAAATAAATAA GCATAGA AGCA TCCATGC CGGGATTTTAGCAAT TERM 711 853040 - 853051 + r 74 -3 -5.48054 | opp_overlap 853040 CGCTCCAAACAAATT CATT CCGT AATG TTTTTTAATTTTGCT TERM 712 853310 - 853287 - R 72 -8.2 -3.32505 | overlap 853286 AAAAACTGATAAAAT GCTACTGTAA AAAC TTTCAGTAGC GTGATGAAGATAAAA A1C_04730 855110 - 854013 - | translation-associated GTPase TERM 713 854201 - 854188 - GR 80 -9.5 -3.44284 | opp_overlap 854197 854199, overlap 854174 854173 854186 TCGGTATGAATAATA CCGGC AGCA GCCGG TGCAAGCGTGCCGTC TERM 714 854279 - 854263 - GR 100 -6.7 -5.58454 | opp_overlap 854263 854262 CCTATAGTAAAAAAA CTTTTAA GAT TTAAAAG ATTATACCCTTCTTT A1C_04735 855216 - 855067 - | acetyltransferase A1C_04740 855534 - 855358 - | acetyltransferase A1C_04745 856251 - 855694 - | peptidyl-tRNA hydrolase TERM 715 856412 - 856385 - R 100 -18.6 -3.09987 | GCAACACTTACCCAA TGTCATTCCCGC GTAG GCGGGAATGACA TAAAATGAGCCAATC A1C_04750 857083 - 856484 - | 50S ribosomal protein L25/general stress protein Ctc TERM 716 857354 - 857337 - R 71 -7.7 -3.53563 | opp_overlap 857337 ATACTTTTTGCTAAA TTCCCGC TTTT GCGAGAA TGATATAAACCGAAC A1C_04755 858132 - 857455 - | organic radical activating protein TERM 717 857720 - 857708 - G 78 -9.1 -3.41602 | opp_overlap 857707 857708 CGTATTTTACTATAA CCGGT TTT ACCGG CTTTCGGCGAACAAA TERM 718 857708 - 857720 + g 72 -9.1 -2.71712 | opp_overlap 857708, overlap 857707 CGTATTTTACTATAA CCGGT TTT ACCGG CTTTCGGCGAACAAA rpmI 858387 - 858253 - | 50S ribosomal protein L35 A1C_04765 858749 - 858955 + | 50S ribosomal protein L35 rplT 858976 - 859329 + | 50S ribosomal protein L20 TERM 719 859363 - 859333 - f 73 -9 -3.21354 | GCACATATTTAGCAA TGTCATTCCGTGGC TTG ACCACGGAATCTCA AGATACAGACTGGAA rnpA 859456 - 859590 + | 50S ribosomal protein L34 A1C_04780 859610 - 859966 + | ribonuclease P TERM 720 860092 - 860057 - T 74 -2.1 -5.53288 | gap 1, opp_overlap 860067, overlap 860062 860067 GGTAATCCAAAAAAA TAATACACAAGTTCTG TAAAT CAGAACTTTT-TACTA GATTGCTTCGTCAAT TERM 721 860067 - 860083 + T 80 -6.6 -4.77157 | opp_overlap 860067 860062 860057 AAAAATAATACACAA GTTCTG TAAAT CAGAAC TTTTTACTAGATTGC A1C_04785 860740 - 860414 - | hypothetical protein TERM 722 860734 - 860718 - G 74 -3.1 -5.49234 | overlap 860711 860706 AGATCTAATAAAAAA TTTTTAC TAG ATAAAAA CTGCAATAGTTCCTT A1C_04790 861266 - 861045 - | hypothetical protein A1C_04795 861599 - 861315 - | hypothetical protein A1C_04800 861776 - 861612 - | hypothetical protein TERM 723 863307 - 863320 + r 79 -9.5 -3.494 | opp_overlap 863299 863296 AAATTGATCCACGCA GGCCC CCAT GGGCC TTGTGTAACAGATTA TERM 724 864194 - 864213 + r 73 -9.2 -2.65808 | opp_overlap 864190 864194, overlap 864191 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 725 864213 - 864194 - R 85 -11.4 -2.5602 | opp_overlap 864194 864191, overlap 864190 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 726 865651 - 865688 + r 76 -6.6 -4.48987 | gap 2, overlap 865654 865657 865662 865681 865682 CCGATAGCGTTCGTT CTGAGCCAGGATCAAACT CTCA AGTTTGATTCTG--TCAG TTTTACTTATAAAAA TERM 727 865657 - 865684 + r 100 -12.2 -2.8155 | overlap 865654 865651 865662 865681 865682 GCGTTCGTTCTGAGC CAGGATCAAACT CTCA AGTTTGATTCTG TCAGTTTTACTTATA A1C_04815 866693 - 866172 - | acetyltransferase TERM 728 867044 - 867016 - R 74 -6.2 -4.48997 | opp_overlap 867014 867023, overlap 867023 TAACGAAGAAAAGAA GAAAAAATTCTG ATCTA CAGAATTTTTTT TAATTATTTTCTAGA TERM 729 867023 - 867037 + r 91 -4.3 -6.00814 | opp_overlap 867016 867023, overlap 867014 GAAAAGAAGAAAAAA TTCTG ATCTA CAGAA TTTTTTTTAATTATT TERM 730 867037 - 867023 - R 88 -4.3 -5.77677 | opp_overlap 867023 867014, overlap 867016 GAAAAGAAGAAAAAA TTCTG ATCTA CAGAA TTTTTTTTAATTATT A1C_04820 868922 - 867123 - | nitrogen regulation protein NtrY TERM 731 869160 - 869183 + r 100 -11.2 -5.37171 | opp_overlap 869160 CTACATAACAAAAAA GCTAGAAATA TTAA TATTTCTAGC TTTTTATTTAGTATT TERM 732 869183 - 869160 - R 100 -11.2 -5.60689 | opp_overlap 869160 CTACATAACAAAAAA GCTAGAAATA TTAA TATTTCTAGC TTTTTATTTAGTATT rpsU 869415 - 869215 - | 30S ribosomal protein S21 A1C_04830 869496 - 870104 + | hypothetical protein A1C_04835 870495 - 870118 - | hypothetical protein TERM 733 870560 - 870571 + H 78 -4.4 -5.44837 | overlap 870559 870563 CTTTTTCTCTTACCT CTTC AAAA GAAG TTTTTGTATTTTTTT TERM 734 871485 - 871502 + G 77 -9.9 -2.62263 | opp_overlap 871485, overlap 871477 ATAAATTGCATGAGA TTCCTGC TTTT GCAGGAA TGATATCGAGGGAGT TERM 735 871502 - 871485 - g 79 -9.9 -2.82234 | opp_overlap 871477 871485 ATAAATTGCATGAGA TTCCTGC TTTT GCAGGAA TGATATCGAGGGAGT ileS 870809 - 874120 + | isoleucyl-tRNA synthetase A1C_04845 874204 - 874593 + | hypothetical protein A1C_04850 874942 - 875145 + | hypothetical protein A1C_04855 877128 - 875131 - | propionyl-CoA carboxylase alpha chain precursor TERM 736 875726 - 875715 - G 81 -4.4 -5.4433 | ATATATAAATAAAAA TAGC CGTT GCTA AAAATACGGTAGTTA TERM 737 876393 - 876383 - G 79 -6.8 -4.71426 | opp_overlap 876383 TCTTCAGTAATAAAA GCAC TTG GTGC TTCTTCGATTACTTT A1C_04860 878877 - 877333 - | propionyl-CoA carboxylase beta chain precursor TERM 738 877753 - 877796 + g 77 -9 -3.26649 | gap 1, overlap 877754 AATAATACCGTCATG CTCTTG-GGATGTACCAGG CAGAAAT CCAGGTACATCCACAAGAC TTACTATAGGAATAT TERM 739 877754 - 877795 + g 89 -12.5 -2.55668 | gap 1, overlap 877753 ATAATACCGTCATGC TCTTG-GGATGTACCAGG CAGAAAT CCAGGTACATCCACAAGA CTTACTATAGGAATA A1C_04865 878951 - 879094 + | acylglycerophosphoethanolamine acyltransferase A1C_04870 879156 - 879290 + | hypothetical protein TERM 740 881285 - 881301 + G 70 -8.1 -3.11812 | opp_overlap 881282 881285 881284 AAATTACTATAACAG TTTTACC GCC GGTAAAA TTCGCTAATGTGAGT A1C_04875 879448 - 882918 + | acylglycerophosphoethanolamine acyltransferase TERM 741 883062 - 883076 + T 75 -4.3 -5.28755 | opp_overlap 883062, overlap 883055 883055 CAATCCAGTTAAAAA TTCTG TAAAT CAGAA TTTTTTAATCTGTTT A1C_04880 883458 - 883189 - | hypothetical protein A1C_04885 884295 - 883534 - | Zinc/manganese ABC transporter permease protein TERM 742 884915 - 884895 - g 70 -8.4 -3.07013 | opp_overlap 884887 TAGTTGCTGAATATA TTTTAGGC TGGGT GCCTAAAA ATACTCATGATTATA TERM 743 885136 - 885095 - g 91 -9.8 -4.36729 | gap 2, opp_overlap 885096 885103, overlap 885099 885103 AGCAAGAATGCAAAA TCAATCAATGTCATTCCTGC TTTA GCAGGAATGACATC--TTGA ACGTTCATACACTAG TERM 744 885136 - 885099 - g 86 -10.2 -3.72395 | gap 2, opp_overlap 885096 885103, overlap 885095 885103 AGAATGCAAAATCAA TCAA--TGTCATTCCTGC TTTA GCAGGAATGACATCTTGA ACGTTCATACACTAG TERM 745 885103 - 885130 + G 100 -17.2 -3.06737 | opp_overlap 885095 885099 885103, overlap 885096 TGCAAAATCAATCAA TGTCATTCCTGC TTTA GCAGGAATGACA TCTTGAACGTTCATA TERM 746 885130 - 885103 - g 100 -17.2 -3.54177 | opp_overlap 885103 885096, overlap 885095 885099 TGCAAAATCAATCAA TGTCATTCCTGC TTTA GCAGGAATGACA TCTTGAACGTTCATA A1C_04890 884381 - 885136 + | 3-demethylubiquinone-9 3-methyltransferase TERM 747 885232 - 885248 + G 93 -10.1 -4.71061 | TAATTACTAGATTTG CTCCGTC ACC GACGGGG TTTTTACATATAGGT gltX 885207 - 886598 + | glutamyl-tRNA synthetase TERM 748 886699 - 886681 - g 83 -8.2 -4.31895 | ATACAGAGTAACAAA TGTCGATG CTT CATCAACA CCAAAAAAGTACGGA A1C_04900 886595 - 887161 + | hypothetical protein TERM 749 887309 - 887295 - T 82 -4.3 -5.61689 | opp_overlap 887295, overlap 887288 AAAAGTAATAAAAAA TTCTG TAAAT CAGAA TTTTTAACTGGATTG A1C_04905 887983 - 887840 - | hypothetical protein A1C_04920 889596 - 889255 - | hypothetical protein TERM 750 890198 - 890168 - R 72 -6.4 -4.26327 | opp_overlap 890175, overlap 890165 890169 890175 TATCCAGTAAAACAA CTAAAAATACTAAC AAT ATTAGTACTTTTAA CTAGACCAGTAAAAA TERM 751 890191 - 890175 - R 75 -4.5 -5.07971 | opp_overlap 890175, overlap 890169 890168 890165 TAAAACAACTAAAAA TACTAAC AAT ATTAGTA CTTTTAACTAGACCA groEL 891961 - 890315 - | chaperonin GroEL TERM 752 891687 - 891721 + g 93 -10.1 -4.37886 | gap 1, overlap 891714 891717 CTAGCAAGTACCGTA GCTGTAGTAGTA-CCG TCAC CGGCTACTTCTGCAGC TTTTGTAGCAGCTGA groES 892275 - 891988 - | co-chaperonin GroES TERM 753 892322 - 892354 + r 83 -2.2 -5.86061 | ACATACTATATATAT TTTATTTTTGCT AGTTCAAGG GGCAAGAATAAA TTTTTTTTACTGACC A1C_04945 893818 - 893672 - | hypothetical protein rph 895197 - 894478 - | ribonuclease PH TERM 754 895258 - 895222 - H 76 -9.7 -2.83822 | overlap 895219 895245 TGTACTCCATAAGTA GTATACTAGTTTAATTT TTC AAATTCAACGAGTATAC CATTGAAAAAATTTT A1C_04955 895325 - 895861 + | GrpE protein TERM 755 895869 - 895856 - f 70 -3.9 -5.12617 | CAAGTAGCTAAAAAA TCTTA ATAC TAAGA TAAAACTTCAAAAAT TERM 756 896161 - 896198 + G 71 -5.2 -4.62904 | gap 1, opp_overlap 896161 CATCAAAATTTAAAA TATCAAATAAATT-TGC ATCAA GCATAATTTATCTGATA TTTTTGAGCATGTTT TERM 757 896198 - 896161 - g 79 -7.4 -4.44277 | gap 1, opp_overlap 896161 CATCAAAATTTAAAA TATCAAATAAATT-TGC ATCAA GCATAATTTATCTGATA TTTTTGAGCATGTTT A1C_04960 896007 - 897062 + | hypothetical protein TERM 758 897134 - 897094 - f 74 -9.2 -2.78073 | gap 1, overlap 897093 ATGATTTTTAACAAG TGTCTAATGTCATTCCTGC TTTT GCGGGAATGACA-TAGAGA AGCATAAAATGACCC TERM 759 897455 - 897443 - g 72 -4.9 -4.89393 | opp_overlap 897443, overlap 897445 GAAATTTTAGAAAAA TACAA TGC TTGTA TCATTGAAGATATTG A1C_04965 897185 - 897853 + | hypothetical protein TERM 760 897938 - 897917 - f 71 -4.5 -4.7254 | ACTTTTTAGCAAAAA TTGTGTTTG GATA CAAACAAAA ACAAAAAAATTTAAA A1C_04970 898319 - 898639 + | MFS type sugar transporter rpsT 900258 - 899986 - | 30S ribosomal protein S20 TERM 761 900160 - 900170 + g 70 -4 -5.08601 | TTCATGTACAACTTT CTTT ATA AAAG TTTTTATTGCACTAG rplQ 900686 - 900270 - | 50S ribosomal protein L17 TERM 762 900630 - 900616 - G 86 -11.4 -2.65815 | GCCACAGCCATATTA GCGAGC ATT GCTCGC CTATGACTACTTGTT A1C_04985 901715 - 900693 - | DNA-directed RNA polymerase subunit alpha TERM 763 901416 - 901426 + g 74 -5.4 -4.8622 | CATTATACGTTTTTC TGCA ACA TGCA TTTTTAATTCAACAC A1C_04990 902117 - 901734 - | 30S ribosomal protein S11 rpsM 902519 - 902142 - | 30S ribosomal protein S13 adk 903216 - 902578 - | adenylate kinase secY 904533 - 903232 - | preprotein translocase subunit SecY TERM 764 904333 - 904323 - G 70 -4 -4.98531 | TTGCTAAAGCAAAAA TAGA CAT TCTA CCTAGCGAGCCTCCG rplO 904998 - 904537 - | 50S ribosomal protein L15 rpmD 905203 - 905012 - | 50S ribosomal protein L30 rpsE 905757 - 905227 - | 30S ribosomal protein S5 TERM 765 905791 - 905813 + r 95 -10.6 -4.07885 | overlap 905792 TAAAACTTTATTTTC TCTCTAGCTG CAT CAGCTAGAGC TTTTACAACACCGTG TERM 766 905792 - 905812 + r 100 -14.1 -3.04517 | overlap 905791 AAAACTTTATTTTCT CTCTAGCTG CAT CAGCTAGAG CTTTTACAACACCGT rplR 906131 - 905775 - | 50S ribosomal protein L18 TERM 767 905872 - 905882 + g 75 -2.4 -5.63374 | ACTTCTTTTATCCCA GCAG AAT CAGC TTTTTTTGCTATTGC rplF 906680 - 906147 - | 50S ribosomal protein L6 rpsH 907088 - 906690 - | 30S ribosomal protein S8 rpsN 907413 - 907108 - | 30S ribosomal protein S14 rplE 907970 - 907431 - | 50S ribosomal protein L5 rplX 908299 - 907970 - | 50S ribosomal protein L24 rplN 908668 - 908300 - | 50S ribosomal protein L14 rpsQ 908976 - 908743 - | 30S ribosomal protein S17 rpmC 909193 - 908978 - | 50S ribosomal protein L29 rplP 909596 - 909186 - | 50S ribosomal protein L16 rpsC 910264 - 909611 - | 30S ribosomal protein S3 rplV 910625 - 910266 - | 50S ribosomal protein L22 rpsS 910912 - 910634 - | 30S ribosomal protein S19 rplB 911758 - 910937 - | 50S ribosomal protein L2 rplW 912055 - 911759 - | 50S ribosomal protein L23 rplD 912675 - 912052 - | 50S ribosomal protein L4 TERM 768 912470 - 912486 + g 91 -5.2 -5.71983 | CTTGCATTACCCGTA CCTTTT TGCTT AAAAGG TTTTTTTGTGGTTCC rplC 913599 - 912952 - | 50S ribosomal protein L3 rpsJ 913917 - 913600 - | 30S ribosomal protein S10 TERM 769 914005 - 913968 - R 100 -13.9 -4.18401 | opp_overlap 913974 914000 914003, overlap 913974 GCAGACATCTTAAAA TATAAATACCCATTATT AAAA AATAATAGGTATTTATA AAATAAATTAATTAT TERM 770 913999 - 913974 - R 85 -8.5 -4.45771 | opp_overlap 913974, overlap 913968 ATCTTAAAATATAAA TACCCATTATT AAAA AATAATAGGTA TTTATAAAATAAATT A1C_05115 915200 - 914013 - | elongation factor Tu TERM 771 914813 - 914828 + g 80 -7.6 -4.32436 | opp_overlap 914802, overlap 914812 AGAATACCACCATAG CAGGTA CACC TACCTG TTTTGCTAGTAATAT A1C_05120 915772 - 916506 + | tRNA/rRNA methyltransferase A1C_05125 916727 - 917056 + | hypothetical protein TERM 772 917222 - 917212 - g 84 -5.4 -5.44119 | GCTATTTTAAAAAAA TGTG CAG CACA GGTTAATTATGAGTT TERM 773 918242 - 918274 + G 70 -7.2 -3.65201 | opp_overlap 918236 AACCTAATATAGCAC GCATTAATGATTTA CGTGA TAAATCGCTAATGC TTGTTACGGCTCTTA fumC 917053 - 918444 + | fumarate hydratase A1C_05135 918542 - 918790 + | antitoxin of toxin-antitoxin system Phd A1C_05140 919059 - 919262 + | toxin of toxin-antitoxin system TERM 774 919790 - 919804 + G 70 -7.1 -3.62522 | overlap 919779 GTGGTGGTACAGGTA CCGGT TCTGC ACCGG TTATTGCACGCATTG TERM 775 920487 - 920477 - g 70 -4 -5.0133 | TAGTTCCTGAAAAAA TTCA TAA TGAA GCTATAGTACAACCT A1C_05145 919450 - 920820 + | cell division protein FtsZ A1C_05150 920817 - 920936 + | hypothetical protein A1C_05165 921913 - 922047 + | ecotin precursor A1C_05170 922877 - 922305 - | hypothetical protein A1C_05175 923773 - 922940 - | ampG protein A1C_05180 923835 - 923981 + | hypothetical protein A1C_05185 925588 - 924356 - | ATP-dependent RNA helicase RhlE TERM 776 924905 - 924922 + g 72 -2.8 -5.38054 | CCTATTACCAAGTTG TTTAGT TAATTC ACTAAA TTTTTCTTTATCAGA TERM 777 925257 - 925275 + g 71 -9 -2.52676 | GGATTCTTTTTTAAT TGCATAAA TTG TTTATGCA TCGGTTCACCGCCTA TERM 778 925491 - 925508 + g 74 -5.5 -4.80455 | TCCGACCCAGCCATT GCAACCG GAAT CGATTGC TTTTGTATTTCAGTC A1C_05190 926476 - 926264 - | cold shock-like protein ksgA 926593 - 926721 + | dimethyladenosine transferase TERM 779 927217 - 927192 - T 75 -5.7 -4.76041 | opp_overlap 927183 927192 927194, overlap 927194 927197 927206 TAGATTTATTAAAAA TATAATTATTA CAAT TAACAATTATA ATTATTAACTTCTTT A1C_05200 928413 - 927592 - | dimethyladenosine transferase TERM 780 928273 - 928285 + g 74 -6.3 -4.37886 | GCCTGGTCCTATTTC TAGCA CCC TGCTA TTTTCTGCAAGGTGA TERM 781 928531 - 928510 - R 72 -6.5 -4.25458 | opp_overlap 928512, overlap 928512 928513 AATCTTATTAATAAA GACTGGACC CCGT GGTCAAGCC ACGGGGTGACAATAT TERM 782 928543 - 928512 - R 71 -7.3 -3.72374 | gap 1, opp_overlap 928512, overlap 928510 928513 TCTTATTAATAAAGA CTG-GACCCCGTGG TCAAG CCACGGGGTGACAA TATACTAAGACGGCA TERM 783 928542 - 928513 - R 71 -8.6 -2.82942 | gap 1, opp_overlap 928512, overlap 928510 928512 CTTATTAATAAAGAC TG-GACCCCGTGG TCAAG CCACGGGGTGACA ATATACTAAGACGGC TERM 784 928555 - 928578 + r 70 -5.2 -4.62904 | opp_overlap 928555 ACAATATACTAAGAC GGCAGCATTA TTTT TATGGCTGCC TTTTTACGCATATTT A1C_05205 929438 - 928548 - | hypothetical protein A1C_05210 931702 - 929606 - | hypothetical protein TERM 785 931796 - 931781 - g 79 -4.8 -5.27779 | opp_overlap 931781 TTTAATAGTAAAAAA TAATAG CAAG CTATTA TTAATATATCAAATA A1C_05215 931713 - 931907 + | hypothetical protein TERM 786 932413 - 932385 - g 78 -9 -3.55761 | GAGCTATGCTGCAAA TTCTAAACGATC GTAAA GCTCGTTTAGAA AAAGAAGGCTTATTT TERM 787 932603 - 932581 - g 71 -5.6 -4.58466 | overlap 932582 932595 CGTACAAGGAGAAAA TTCCAGCAAT GAA ATTGCTGAAG CAATTGAAGGATTTA TERM 788 932602 - 932582 - g 77 -9.1 -3.34357 | overlap 932581 932595 GTACAAGGAGAAAAT TCCAGCAAT GAA ATTGCTGAA GCAATTGAAGGATTT TERM 789 932903 - 932889 - g 77 -4.4 -5.22312 | ACTCATATGAAAAAA TATTAT TGA ATAATA CTAGCAGGTTAATTA xseA 932036 - 933370 + | exodeoxyribonuclease VII large subunit A1C_05225 933449 - 935017 + | hypothetical protein A1C_05230 935014 - 935796 + | exodeoxyribonuclease III TERM 790 935905 - 935878 - f 100 -10.2 -4.5448 | opp_overlap 935885 TATCCATAAAAATAA TTTAAAATACTA ATAT TAGTATTTTAAA ACTGGATCCCGTGAT TERM 791 936054 - 936031 - g 75 -8.2 -3.57901 | opp_overlap 936031 936037, overlap 936029 936034 TTTACGAAAAATATA TGACGATTGT CGGT ACAATCGGCA ATTTTATGTTTTATG TERM 792 936031 - 936054 + G 73 -8.2 -3.55066 | opp_overlap 936031 936029 936034, overlap 936037 TTTACGAAAAATATA TGACGATTGT CGGT ACAATCGGCA ATTTTATGTTTTATG TERM 793 936051 - 936034 - g 71 -8.5 -2.90234 | opp_overlap 936031 936037, overlap 936031 936029 ACGAAAAATATATGA CGATTGT CGGT ACAATCG GCAATTTTATGTTTT TERM 794 936037 - 936055 + G 80 -6 -4.95843 | opp_overlap 936034 936031 936029, overlap 936031 AAAAATATATGACGA TTGTCGGT ACA ATCGGCAA TTTTATGTTTTATGT A1C_05235 935994 - 936260 + | hypothetical protein TERM 795 936577 - 936565 - g 71 -7.7 -3.51032 | opp_overlap 936565 ATTGCCCAATGATAA GCTAC TTG GTAGC TTTGTTAGAAAGTAT TERM 796 936565 - 936577 + G 80 -7.7 -4.16284 | opp_overlap 936565 ATTGCCCAATGATAA GCTAC TTG GTAGC TTTGTTAGAAAGTAT engA 936263 - 937606 + | GTP-binding protein EngA A1C_05245 937832 - 937614 - | ATPase TERM 797 937983 - 937995 + rH 84 -9.1 -3.73611 | ATACCTTACTTGTAT GCGGT CCT ACCGC TTCTGTATCTTTACT A1C_05250 938515 - 938210 - | hypothetical protein A1C_05255 938514 - 938696 + | hypothetical protein A1C_05260 940182 - 938746 - | 2-polyprenylphenol 6-hydroxylase TERM 798 939158 - 939143 - G 75 -4.7 -5.02074 | overlap 939131 TCACGTTTTAAAAAA CCGAA TAGACT TTCGG CAACAGCTAAACGAT TERM 799 939287 - 939274 - G 71 -3.1 -5.19212 | ATCAGCATGAAAAAA CCCAT CTCT ATAGG CTTGATTGAAAAACA TERM 800 939503 - 939477 - G 73 -8 -3.38768 | opp_overlap 939477 939485 GCATATTATCCATAA GCTCAGAAGCAG CTG CCGCTTCTAACC TTAAATCAAGCTCAA TERM 801 939762 - 939783 + g 79 -3.7 -5.62552 | ACAATGTCATCCCGA GACTTGATT GTGG GATCCAGTC TTTTTTAATTTTTTT ubiE 940925 - 940179 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 802 940687 - 940703 + g 71 -6.6 -4.09243 | TTATTGCCTCTATCT CTTGCT TTTTT AGCAAG TTTTAAAGCAATATC A1C_05270 941274 - 941119 - | hypothetical protein A1C_05275 941336 - 941271 - | hypothetical protein TERM 803 941436 - 941456 + H 73 -5.6 -4.66057 | CGGGATATTTGATTT TTTTAGAT AATTG ATCTAAAA TTTTAATTTGTGTAT TERM 804 941494 - 941512 + H 74 -9 -3.26546 | overlap 941493 ATCAATAATAGTTCT CATAATAG TTT CTATTATG TATTGATGTATTATG A1C_05290 942402 - 942605 + | hypothetical protein A1C_05295 943192 - 943683 + | mannose-1-phosphate guanylyltransferase A1C_05300 944152 - 944400 + | hypothetical protein TERM 805 944540 - 944560 + T 85 -11.2 -2.79915 | overlap 944542 ATTGCACCTCTGTCA TACCGTGG CTTGA CCACGGTA TCTAGTAAGATAACT TERM 806 944542 - 944558 + T 75 -9.4 -2.94747 | overlap 944540 TGCACCTCTGTCATA CCGTGG CTTGA CCACGG TATCTAGTAAGATAA TERM 807 944597 - 944581 - T 82 -6.7 -4.99056 | opp_overlap 944581, overlap 944575 944571 TAAGATAACTAAAAA TACTAAT AAT ATTAGTA TTTTGAACTAAACAC TERM 808 944581 - 944597 + T 72 -6.7 -4.13767 | opp_overlap 944581 944575 944571 TAAGATAACTAAAAA TACTAAT AAT ATTAGTA TTTTGAACTAAACAC TERM 809 944756 - 944724 - T 85 -8 -4.70772 | opp_overlap 944728, overlap 944725 ATATATTTAATAAAA TCAACATATAAAAA ACTTG TTTTTATATGTTGT ACTAGATTCCTGCTT TERM 810 944755 - 944725 - T 93 -11.5 -3.41378 | opp_overlap 944728, overlap 944724 TATATTTAATAAAAT CAACATATAAAAA ACTTG TTTTTATATGTTG TACTAGATTCCTGCT TERM 811 944780 - 944763 - T 76 -9.9 -2.78935 | ATATGTTGTACTAGA TTCCTGC TTTC GCAGGAA TGACATCACGGTCTT TERM 812 944917 - 944883 - T 72 -4.5 -4.85599 | opp_overlap 944886 944893, overlap 944886 944893 GGCACTCCACAAAAA TAACAAAAAATTCTG ATTTA CAGAATTTTTTCTTC CTTGCTGTGTCAATT TERM 813 944914 - 944886 - T 76 -6.2 -4.53475 | opp_overlap 944886 944893, overlap 944883 944893 ACTCCACAAAAATAA CAAAAAATTCTG ATTTA CAGAATTTTTTC TTCCTTGCTGTGTCA TERM 814 944893 - 944907 + T 82 -4.3 -5.5604 | opp_overlap 944893 944886 944883, overlap 944886 AAAAATAACAAAAAA TTCTG ATTTA CAGAA TTTTTTCTTCCTTGC TERM 815 944907 - 944893 - T 88 -4.3 -5.80727 | opp_overlap 944886 944893, overlap 944886 944883 AAAAATAACAAAAAA TTCTG ATTTA CAGAA TTTTTTCTTCCTTGC A1C_05305 946237 - 944984 - | Poly-beta-hydroxyalkanoate depolymerase A1C_05320 947380 - 947144 - | hypothetical protein A1C_05325 948404 - 947655 - | putative deoxyribonuclease, hydrolase TERM 816 948442 - 948457 + r 76 -6.2 -4.60746 | opp_overlap 948442, overlap 948437 ATGGTATCCAAAAAA CAACTA GTAT TAGTTG TTTTAATATTTTTAC TERM 817 948457 - 948442 - R 81 -6.2 -5.09225 | opp_overlap 948442 948437 ATGGTATCCAAAAAA CAACTA GTAT TAGTTG TTTTAATATTTTTAC A1C_05330 950226 - 948688 - | methionyl-tRNA synthetase tdk 950834 - 950223 - | thymidylate kinase TERM 818 951738 - 951702 - g 83 -10.4 -3.31537 | gap 2, overlap 951707 951737 AGGATATTATAGTAA GACCATCATTGTCAAGCC ACG GGCT-GACAATGA-GATC CTCGCCTCGCAATGA TERM 819 951734 - 951707 - g 90 -12.2 -2.79589 | gap 1, overlap 951702 ATTATAGTAAGACCA TCATTGTCAAGCC ACG GGCT-GACAATGA GATCCTCGCCTCGCA A1C_05340 951095 - 952375 + | proline/betaine transporter TERM 820 952461 - 952484 + T 70 -8.3 -3.06054 | opp_overlap 952460 952464, overlap 952460 AAAGCATCACTACAG CAAGCTTTT TGAATT AAAAGCTTG ATTTATCTCGCTTTA TERM 821 952501 - 952513 + T 79 -9.1 -3.45849 | TTTATCTCGCTTTAT GCTGG ATA CCAGC TTGTGCTAGTATGAC ubiA 953472 - 952630 - | prenyltransferase TERM 822 953436 - 953406 - G 76 -3.3 -5.49729 | overlap 953409 953414 AAGCAGGGAAAAAAA CCAGCAAATAAGC TACCG GCTTATCTACCCG CATTAATTTTAAAGT TERM 823 954347 - 954371 + H 93 -11.5 -3.37354 | overlap 954348 TATGAAACCACGTCA ATTGTGCAGCA AGC TGCTGCACAAA TTCTAAATCCCTATA TERM 824 954348 - 954370 + H 100 -15 -2.62091 | overlap 954347 ATGAAACCACGTCAA TTGTGCAGCA AGC TGCTGCACAA ATTCTAAATCCCTAT TERM 825 955166 - 955183 + G 74 -7.1 -3.98083 | opp_overlap 955166 955165 AGAGAAGTTTAGAAG GCTATTT AACC AAATAGC TTTATCGGTTGACTG valS 954786 - 957224 + | valyl-tRNA synthetase TERM 826 958024 - 958000 - f 75 -5.8 -4.74215 | opp_overlap 958002 ATATCAGTAACAAAA TAGTCATATG ATTTA CATTTGACTA AATTACCTTTTTTTT TERM 827 959354 - 959333 - f 76 -6.1 -4.5448 | TATCCATAAAAATAA TAAAAAATA CTAG TATTTTTTA ACTGGATCCAGCGAT TERM 828 959588 - 959578 - g 74 -5.4 -4.78661 | ATGTAAAAACTAAAA CCTT AAA AAGG CAACTACAATTCTTA A1C_05400 959496 - 960782 + | hypothetical protein A1C_05405 961119 - 960943 - | hypothetical protein A1C_05410 961763 - 961311 - | hypothetical protein A1C_05415 962040 - 961735 - | hypothetical protein TERM 829 962177 - 962203 + r 76 -5.2 -5.1675 | TTATAATAAAACCCC TGATATAGATCG TTG CGATATATACCA TTTTTTCCTAGATCA A1C_05420 962729 - 962388 - | hypothetical protein A1C_05435 963899 - 963985 + | hypothetical protein A1C_05440 963986 - 964234 + | hypothetical protein TERM 830 964562 - 964574 + T 95 -6.3 -5.74086 | ACGCTGGTATATCTT CAATC ATC GATTG TTTTTTGTTTGATTT clpX 965822 - 964545 - | ATP-dependent protease ATP-binding subunit TERM 831 965164 - 965183 + g 77 -9.3 -3.19038 | overlap 965157 CTACCGCCTTGAGGA GGCACAG AAGCAA CTGTGCC TTCCATAATTTTAAG TERM 832 965569 - 965585 + g 71 -8.1 -3.36273 | TTATAAACCGCTACT GCTAAAA TCT TTTTAGC TTGGTCTTGCCCAAC A1C_05450 966440 - 965889 - | ribosomal-protein-alanine acetyltransferase A1C_05455 967257 - 966574 - | trans-regulatory protein ExsB A1C_05460 967345 - 967232 - | hypothetical protein A1C_05465 967597 - 967463 - | hypothetical protein TERM 833 967576 - 967590 + g 79 -7.2 -4.47307 | CTATAGTAAACCCGT CAAATG CGT CATTTG TTTTCATCTTCCTTT A1C_05470 967751 - 967620 - | hypothetical protein TERM 834 967831 - 967852 + H 72 -8.9 -2.91582 | opp_overlap 967821 ATATACTGATTTATA TTGTAACTA TGCA TAGTTACAA TATATAAGTCAAATA TERM 835 968083 - 968097 + H 91 -10 -4.30978 | GTACAAACGTCCTGG GGAGTG CGA CACTCC TTTTAGTCACTTGCA TERM 836 968193 - 968182 - g 77 -4.4 -5.25803 | opp_overlap 968182 AAGTTCTATAAAAAA GACT TGAT AGTC GTTATGGTTTCTTTA A1C_05475 968152 - 969858 + | multidrug resistance protein TERM 837 969945 - 969959 + F 82 -4.3 -5.5074 | opp_overlap 969937 969945, overlap 969938 AAAAGATTAAAAAAA TTCTG TAAAT CAGAA TTTTTTATTAGATTG TERM 838 969959 - 969945 - f 88 -4.3 -5.69023 | opp_overlap 969945 969938, overlap 969937 AAAAGATTAAAAAAA TTCTG TAAAT CAGAA TTTTTTATTAGATTG A1C_05480 970187 - 970435 + | hypothetical protein A1C_05485 970979 - 972154 + | bicyclomycin resistance protein TERM 839 972402 - 972414 + G 80 -7.7 -4.3467 | TGATAGTAGTCATGT CCGTT ATG AACGG TTTTCATATAGAGCT TERM 840 973201 - 973217 + G 76 -5.2 -5.03994 | opp_overlap 973197 TATGGGAGCAAGCAC TAAGCA AATAA TGCTTA TTTTTATCTATAACG A1C_05490 972263 - 973510 + | lipoprotein releasing system, transmembrane protein A1C_05495 973503 - 974168 + | lipoprotein releasing system ATP-binding protein LolD A1C_05500 974225 - 975223 + | hypothetical protein A1C_05505 975990 - 976112 + | hypothetical protein A1C_05510 976332 - 977597 + | hypothetical protein TERM 841 978022 - 978032 + G 71 -3.2 -5.26247 | overlap 978010 TCAGCTATACAATTA CTGT TTA GCAG TTTTATTTATTTTAC A1C_05515 977911 - 979569 + | cytochrome c-type biogenesis protein CcmF A1C_05530 980294 - 980178 - | hypothetical protein TERM 842 980801 - 980785 - R 73 -8.1 -3.51924 | overlap 980788 TCGTCATTTAGAGAA GAATTAC GTA GTAATTC GACGAAGCAATCTAG TERM 843 981095 - 981076 - R 100 -8.6 -5.27769 | opp_overlap 981076 981075 AGAAAAAATTAAAAA CCCCCTTT TTTC AAAGAGGG CTTTTTCTTGAAGAA A1C_05535 986113 - 981137 - | Outer membrane protein B TERM 844 982017 - 982036 + g 74 -9.2 -3.14527 | opp_overlap 982027, overlap 982015 TCAACAGCTTCGTCA CCTGCAGC AACC GCAGCAGG TATTGCTCCAGCTTC A1C_05540 987047 - 986442 - | guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein A1C_05545 988458 - 987469 - | Beta-glucosidase TERM 845 987706 - 987741 + g 100 -12.2 -5.09225 | opp_overlap 987712, overlap 987707 GGAAATAATAAGCCC TTTAAAGCCTATATTA TTTT TAATATAGGCTTTAAC TTTTTTGGATAGGGT TERM 846 987707 - 987740 + g 100 -15.7 -3.64812 | opp_overlap 987712, overlap 987706 GAAATAATAAGCCCT TTAAAGCCTATATTA TTTT TAATATAGGCTTTAA CTTTTTTGGATAGGG TERM 847 987735 - 987712 - G 87 -11.2 -3.56366 | opp_overlap 987707 987706 AATAAGCCCTTTAAA GCCTATATTA TTTT TAATATAGGC TTTAACTTTTTTGGA A1C_05550 988807 - 988511 - | hypothetical protein A1C_05555 989084 - 988794 - | integration host factor alpha-subunit A1C_05560 989628 - 989167 - | hypothetical protein A1C_05565 990085 - 990555 + | bacterioferritin comigratory protein TERM 848 990579 - 990622 + T 79 -10.3 -3.04322 | gap 1, overlap 990581 990595 TACGTGGATCAATTC CAC-CGCTGTCGTACCGTGG CTTGA CCACGGGGTGACACCGAGTG TGTTGGGCCATTCAG A1C_05570 991529 - 990657 - | lipid A biosynthesis lauroyl acyltransferase TERM 849 991510 - 991520 + gT 72 -2.6 -5.40004 | ATTAAATATCTGAGC TTTT TTA AAAA TTTTTTCATTTAATA lpxK 992469 - 991492 - | tetraacyldisaccharide 4'-kinase TERM 850 992587 - 992562 - R 70 -6.3 -4.10188 | opp_overlap 992565, overlap 992565 GAGATCCATAAACAA TAACTTCAATA TCAA TATAGAAGTTA CATATTTGGTAAAAT A1C_05580 993597 - 992692 - | periplasmic protein A1C_05585 994334 - 993546 - | hypothetical protein TERM 851 994377 - 994427 + r 76 -7.7 -3.87641 | gap 1, opp_overlap 994423, overlap 994381 ATGACCAGCTCGCTC GCAT-CACTCTATGTCATTCCCGC TTGC GCGTGAATGACATAGAGCATATAC TTTATAAACCATATT TERM 852 994381 - 994422 + r 100 -13.1 -3.05997 | overlap 994377 CCAGCTCGCTCGCAT CACTCTATGTCATTCCCGC TTGC GCGTGAATGACATAGAGCA TATACTTTATAAACC ligA 994665 - 994573 - | NAD-dependent DNA ligase LigA TERM 853 994884 - 994911 + r 79 -7.9 -4.27192 | gap 1, opp_overlap 994901, overlap 994887 994909 994910 TTTCTCCGTCCATTT G-AACTGTTGCA AAACA TGCAACAGTTGC TTTTCCTAAGCGTTT TERM 854 994887 - 994907 + r 86 -9.8 -3.71672 | opp_overlap 994901, overlap 994884 CTCCGTCCATTTGAA CTGTTGCA AAACA TGCAACAG TTGCTTTTCCTAAGC A1C_05595 996986 - 994917 - | NAD-dependent DNA ligase LigA TERM 855 995276 - 995288 + g 72 -4.9 -4.76041 | TATCACCGATGCCTT CTAAA TTG TTTAG TTTTTGATAGATATC TERM 856 996695 - 996653 - G 71 -8 -3.25802 | opp_overlap 996653 996656, overlap 996649 996645 GAGCAAACTCATCAA GACGTAAGAAATTTTTTATA CGG TCTACAAAATCTCTTACATC TTGCTCATCAAAAGC A1C_05600 997167 - 996973 - | hypothetical protein TERM 857 997130 - 997144 + g 70 -4.3 -4.77157 | opp_overlap 997130 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTACTAGATTGC TERM 858 997144 - 997130 - G 91 -4.3 -6.04419 | opp_overlap 997130 AAAATAATAAAAAAA TTCTG TAAAT CAGAA TTTTTACTAGATTGC A1C_05605 997395 - 997168 - | prevent-host-death family protein tgt 998529 - 997444 - | queuine tRNA-ribosyltransferase A1C_05615 999047 - 998763 - | hypothetical protein A1C_05620 999325 - 999447 + | hypothetical protein TERM 859 999812 - 999828 + T 88 -9.5 -4.11773 | GATTACATTGGTTTT GTGAGAA ATG TTCTCAC TTTTGGCAGATGTTT TERM 860 999974 - 999954 - T 74 -8.3 -3.58522 | overlap 999956 ACTACTATGCCTAAA GAGCTGATG AGA CATCAGCTA ATAATGACATTTCAT TERM 861 999972 - 999956 - T 87 -10.9 -3.36991 | overlap 999954 TACTATGCCTAAAGA GCTGATG AGA CATCAGC TAATAATGACATTTC A1C_05625 1001256 - 999949 - | hypothetical protein TERM 862 1001585 - 1001573 - R 71 -7.7 -3.4691 | ATGCAATAATACCAA TGCCA AGC TGGCA TCACATATACATTAT trmE 1002934 - 1001597 - | tRNA modification GTPase TrmE TERM 863 1002465 - 1002451 - G 80 -7.8 -4.16251 | opp_overlap 1002451 1002449 1002446 AGATAATTTTTAAAA GCTGAC TAC GCCAGC TATTATATAATTCTT TERM 864 1002959 - 1002981 + H 70 -5 -4.60292 | opp_overlap 1002975, overlap 1002975 ATGCCTCTTGCTTAA GTTATTTTAT ATA ATATAATAAC TTTATTATTATTCTA TERM 865 1007626 - 1007582 - g 80 -5.3 -5.15167 | opp_overlap 1007585 1007589 1007593, overlap 1007585 1007589 1007593 GATTATTAATAAAAA TAATTAATAAATCTAAAACAA TTA TTGCTTTAGATTTATGGATTG ATAATAATAACTTAG TERM 866 1007623 - 1007585 - g 79 -7 -4.66002 | opp_overlap 1007585 1007589 1007593, overlap 1007582 1007589 1007593 TATTAATAAAAATAA TTAATAAATCTAAAACAA TTA TTGCTTTAGATTTATGGA TTGATAATAATAACT TERM 867 1007619 - 1007589 - g 100 -12.2 -3.78633 | opp_overlap 1007585 1007589 1007593, overlap 1007585 1007582 1007593 AATAAAAATAATTAA TAAATCTAAAACAA TTA TTGCTTTAGATTTA TGGATTGATAATAAT TERM 868 1007589 - 1007619 + G 77 -10 -2.57974 | opp_overlap 1007589 1007585 1007582 1007593, overlap 1007585 1007593 AATAAAAATAATTAA TAAATCTAAAACAA TTA TTGCTTTAGATTTA TGGATTGATAATAAT TERM 869 1007615 - 1007593 - g 88 -8.6 -4.43642 | opp_overlap 1007593 1007589 1007585, overlap 1007589 1007585 1007582 AAAATAATTAATAAA TCTAAAACAA TTA TTGCTTTAGA TTTATGGATTGATAA A1C_05635 1003006 - 1007754 + | NAD-specific glutamate dehydrogenase A1C_05640 1008135 - 1008338 + | hypothetical protein A1C_05645 1008341 - 1008658 + | hypothetical protein A1C_05650 1008636 - 1008758 + | hypothetical protein TERM 870 1008869 - 1008884 + F 71 -4.6 -4.77757 | opp_overlap 1008869 TGAATCCAGCATAAA GCGAGA TAAA TCACGC TTTTAATTTTTAACA TERM 871 1009864 - 1009876 + G 70 -6.2 -4.24342 | TTTTGCTGTTTGCAT GCCG ATTGC CGGC TTTATTGCTGACCGC A1C_05655 1009019 - 1010290 + | proline/betaine transporter A1C_05660 1010392 - 1010643 + | transcriptional regulator A1C_05665 1010624 - 1010776 + | PilT domain-containing protein A1C_05670 1011487 - 1011233 - | hypothetical protein A1C_05675 1011869 - 1011534 - | hypothetical protein A1C_05680 1012454 - 1011960 - | hypothetical protein TERM 872 1012112 - 1012129 + g 71 -5.5 -4.65182 | ATAGTTTCGTTATGG CTGCGGA TATT TCCGGAG TTTGTTTCATTTCTA TERM 873 1012623 - 1012633 + r 74 -6.8 -4.2602 | opp_overlap 1012623, overlap 1012621 ATAACTTCATAGATA GCCT GTC AGGC TTATTTATTAATATA A1C_05685 1014071 - 1012866 - | aspartate kinase TERM 874 1013697 - 1013742 + g 90 -10.1 -3.99374 | opp_overlap 1013707, overlap 1013700 1013702 TAACTGTAAACATTT TTTTAGTAAATCTGTAGTA ACTGATTC TACTACAGATTTACTATGA TTATTATTGGTGAGA TERM 875 1013700 - 1013739 + g 100 -14 -3.0438 | opp_overlap 1013707, overlap 1013697 1013702 CTGTAAACATTTTTT TAGTAAATCTGTAGTA ACTGATTC TACTACAGATTTACTA TGATTATTATTGGTG TERM 876 1013702 - 1013737 + g 90 -12.2 -3.0663 | opp_overlap 1013707, overlap 1013700 1013697 GTAAACATTTTTTTA GTAAATCTGTAGTA ACTGATTC TACTACAGATTTAC TATGATTATTATTGG TERM 877 1014309 - 1014258 - R 100 -23 -3.61774 | gap 1, opp_overlap 1014259 1014271 1014275 1014299, overlap 1014259 1014275 TATAACACTCTCAAA GTCCATCTGTAAATAAACTTTAATT AAT AATTAAAGTTTATTTACAGATGG-C ATCTTAGGCATTTGT TERM 878 1014259 - 1014310 + r 100 -21.6 -3.08774 | gap 1, opp_overlap 1014258 1014259 1014275, overlap 1014271 1014275 1014299 ATAACACTCTCAAAG T-CCATCTGTAAATAAACTTTAATT AAT AATTAAAGTTTATTTACAGATGGCA TCTTAGGCATTTGTA TERM 879 1014309 - 1014259 - R 100 -23.2 -2.76583 | opp_overlap 1014259 1014271 1014275 1014299, overlap 1014258 1014275 ATAACACTCTCAAAG TCCATCTGTAAATAAACTTTAATT AAT AATTAAAGTTTATTTACAGATGGC ATCTTAGGCATTTGT TERM 880 1014271 - 1014297 + r 93 -11.2 -3.57462 | opp_overlap 1014258 1014259 1014275, overlap 1014259 1014275 AAGTCCATCTGTAAA TAAACTTTAATT AAT AATTAAAGTTTA TTTACAGATGGCATC TERM 881 1014275 - 1014293 + r 82 -7.6 -4.42806 | opp_overlap 1014258 1014259 1014275, overlap 1014271 1014259 CCATCTGTAAATAAA CTTTAATT AAT AATTAAAG TTTATTTACAGATGG TERM 882 1014293 - 1014275 - R 82 -7.6 -4.42806 | opp_overlap 1014275 1014271 1014259, overlap 1014258 1014259 CCATCTGTAAATAAA CTTTAATT AAT AATTAAAG TTTATTTACAGATGG rpmA 1014573 - 1014313 - | 50S ribosomal protein L27 rplU 1014915 - 1014598 - | 50S ribosomal protein L21 A1C_05700 1015734 - 1015132 - | phosphatidylglycerophosphatase A tatA 1015813 - 1015974 + | twin argininte translocase protein A A1C_05710 1017119 - 1016097 - | ABC-type transport systems periplasmic component TERM 883 1017954 - 1017937 - g 72 -5.7 -4.49531 | AACAAAACCAACAAA TCAATTT AGAA AAATTGA TAGAACTTTGCTTAA A1C_05715 1017240 - 1018076 + | hypothetical protein A1C_05720 1018414 - 1018503 + | hypothetical protein TERM 884 1018871 - 1018853 - f 74 -6.8 -4.25566 | overlap 1018866 AATAATGAGCTAAAA CAAGCATT AAC AATACTTG AAGTAATAAATTTAA A1C_05725 1018958 - 1019065 + | hypothetical protein TERM 885 1019143 - 1019108 - T 90 -8.4 -4.93318 | opp_overlap 1019113, overlap 1019113 GATAAGGTAGAAAAA TAAAAGGTCGCCTG TGATATAT CAGACGACCTATTA CAAATTAGTTAGCTG TERM 886 1019138 - 1019113 - T 95 -8.3 -5.35224 | opp_overlap 1019113, overlap 1019108 GGTAGAAAAATAAAA GGTCGCCTG TGATATAT CAGACGACC TATTACAAATTAGTT A1C_05730 1019399 - 1019148 - | hypothetical protein A1C_05735 1020165 - 1019479 - | endonuclease III A1C_05740 1020215 - 1020529 + | glutaredoxin-like protein grla TERM 887 1020570 - 1020596 + F 81 -9.4 -3.58343 | opp_overlap 1020570 GTCATTACCGCGAAA GCGGGAAGCC TTACGCT GGATTCCCGC TTTCGCGGTAATGAC TERM 888 1020596 - 1020570 - f 81 -9.4 -3.58343 | opp_overlap 1020570 GTCATTACCGCGAAA GCGGGAAGCC TTACGCT GGATTCCCGC TTTCGCGGTAATGAC A1C_05745 1020641 - 1021285 + | Serine esterase A1C_05750 1021347 - 1021541 + | hypothetical protein A1C_05755 1021547 - 1021672 + | DNA modification methylase A1C_05760 1021800 - 1021934 + | DNA modification methylase-like protein A1C_05765 1022193 - 1022354 + | hypothetical protein glyA 1022369 - 1023631 + | serine hydroxymethyltransferase TERM 889 1023791 - 1023780 - g 73 -4.4 -5.00616 | opp_overlap 1023780 TGTTGGTCGAAAAAA CATG CAAC CATG ATTATTTTAGGTTCG A1C_05775 1023624 - 1024517 + | lipoyl synthase A1C_05780 1024757 - 1024987 + | hypothetical protein A1C_05785 1024974 - 1025294 + | PemK-like growth inhibitor A1C_05790 1025321 - 1025824 + | putative metalloprotease TERM 890 1026284 - 1026273 - g 74 -3 -5.40072 | overlap 1026274 GGTCGTTTAAAAAAA CTTA TACG TAAG CATATAATTGCAGCT A1C_05795 1025841 - 1026746 + | hemolysin C TERM 891 1026789 - 1026799 + T 70 -4 -4.99312 | opp_overlap 1026760 1026758 TTGATACTCTAAGTT CATT AAA AATG TTTTGTTATTATGTT A1C_05800 1026924 - 1026808 - | hypothetical protein TERM 892 1027225 - 1027207 - R 70 -8.2 -3.10121 | opp_overlap 1027207 1027206, overlap 1027206 1027203 CATAAACTAAACAAC TCTCAGCT ATA AGCTAAGA TGTTATAAATAGAAG A1C_05805 1027406 - 1027209 - | transposase IS200-family protein A1C_05810 1030130 - 1028688 - | ADP,ATP carrier protein TERM 893 1029152 - 1029135 - G 71 -8.5 -2.90496 | opp_overlap 1029134 1029135 TGCTGCTGCAAACCA GTTATGC ATAC GCATAAC GTTATTACCGATGAT TERM 894 1030297 - 1030324 + H 79 -7.2 -4.4281 | gap 1, opp_overlap 1030291 1030293 1030301 1030303, overlap 1030291 ATGAAAATATATCTA CAG-ATATCATCT GAG AGATGGTATACTG TTTGTTGTACTTTGA TERM 895 1030960 - 1030973 + G 85 -3.1 -6.02914 | TTACTTACCTGCCCG TGGGA TTTT TCTCA TTTTTTTTATATAAG A1C_05815 1030648 - 1031613 + | Poly-beta-hydroxybutyrate polymerase A1C_05820 1031762 - 1032940 + | acetyl-CoA acetyltransferase TERM 896 1033085 - 1033071 - T 88 -4.3 -5.73672 | opp_overlap 1033065 1033071, overlap 1033063 AAATAATCAAAAAAA TGCTA CAAAT TAGCA TTTTTATATTTCCTT TERM 897 1033071 - 1033085 + T 75 -4.3 -5.23644 | opp_overlap 1033071 1033063, overlap 1033065 AAATAATCAAAAAAA TGCTA CAAAT TAGCA TTTTTATATTTCCTT A1C_05825 1033617 - 1033207 - | hypothetical protein A1C_05830 1034054 - 1034269 + | hypothetical protein TERM 898 1034667 - 1034688 + F 70 -5.9 -4.31433 | opp_overlap 1034657, overlap 1034669 TAAAATATGGTTTAT TACCCATAT AAAT ATATGGGCA TTTATTATAGAACTC A1C_05835 1034961 - 1035242 + | hypothetical protein TERM 899 1035309 - 1035295 - T 74 -8.6 -3.31792 | opp_overlap 1035287, overlap 1035307 1035308 GTATGACCCGTATAA CGGTTT AGC AAACCG CCGCCTTCGGCCACT A1C_05840 1036053 - 1035829 - | hypothetical protein A1C_05845 1037594 - 1036650 - | acyl-carrier-protein S-malonyltransferase TERM 900 1039240 - 1039267 + r 87 -10.8 -3.32536 | opp_overlap 1039250, overlap 1039244 TAATTAAAACCTTCC TCAAGAATAGCA ATAA TGTTATTCTTGA TTGTAGAAGTCCTTT A1C_05850 1042132 - 1039676 - | ATP-dependent helicase TERM 901 1041374 - 1041391 + g 74 -2.1 -5.54264 | gap 1, overlap 1041377 TCTTCTTAATTCTTT CGATAAAA GGC TTTTA-CG TTTTTTTCCGTCTTT TERM 902 1042145 - 1042180 + r 83 -6.9 -5.10004 | gap 1, overlap 1042147 CATTTATGTATCGCT TACTGTCACCACGTGG CTTGA CCACGTGGTC-CAGTC TTTTTAATTATTTTT TERM 903 1042147 - 1042178 + r 88 -9.5 -4.12448 | gap 1, overlap 1042145 TTTATGTATCGCTTA CTGTCACCACGTGG CTTGA CCACGTGGTC-CAG TCTTTTTAATTATTT A1C_05855 1042804 - 1042184 - | surfeit locus protein 1 A1C_05860 1043748 - 1043059 - | DNA polymerase III subunit epsilon TERM 904 1043906 - 1043922 + r 72 -8.1 -3.31144 | overlap 1043909 CTTGATTGCTTCGTC GAATTAC TAC GTAATTC TTCTCGCAATGACGA coaE 1044569 - 1043994 - | dephospho-CoA kinase TERM 905 1044021 - 1044031 + g 74 -5.4 -4.86385 | opp_overlap 1044021 TGCAATTACGAGAAT TAGC TGT GCTA TTTGTTTTTCCAAGT TERM 906 1044071 - 1044091 + g 78 -7 -4.44819 | overlap 1044073 CAACGCTGCTATTTA TAGCAAAA TCTGC TTTTGCTA TTTTGCTCTCTTGTG A1C_05870 1045375 - 1044563 - | hypothetical protein TERM 907 1045052 - 1045032 - G 76 -3.3 -5.41143 | TAGCTTTCAAAAAAA TCCGCTA CTATTTT TAGCAGA TTATCATCTCCTCGA TERM 908 1045387 - 1045406 + H 74 -6.6 -4.33417 | overlap 1045400 GCATAATCAAGTTTT TAATTTAG AATT CTAAATTA TTTATTATAAGTCCA TERM 909 1046073 - 1046062 - H 73 -5.8 -4.58395 | opp_overlap 1046062 GGCATTGCCTAAAAA CGGT TAAT ACCG TCATTAAAACTTACA TERM 910 1046224 - 1046196 - g 77 -9.1 -3.18366 | overlap 1046194 1046192 1046204 TTGTGAATGAATATA TGTTAGAATTTGT GAA AAAAATTCTAACA AAAATTCAGCATGAA TERM 911 1046239 - 1046229 - g 70 -4 -5.11112 | AAATTCTAACAAAAA TTCA GCA TGAA AATTTATATTGGGAT A1C_05875 1046159 - 1046632 + | hypothetical protein TERM 912 1047059 - 1047047 - g 74 -7.7 -3.85817 | ATTGCTGCCGATAAA CTTGC AGT GCAAG GAAGAGAAACTGCTA rnhA 1046642 - 1047100 + | ribonuclease H TERM 913 1047156 - 1047182 + G 74 -7.5 -3.9243 | AGATGAATTTTTGAA TCAATATTATG AAAGC CGTAATATTGA TTATTTAGGGCGTTC A1C_05885 1047088 - 1047387 + | hypothetical protein A1C_05890 1047456 - 1047905 + | ABC transporter substrate binding protein TERM 914 1047976 - 1047965 - f 83 -3 -5.66684 | GAATCCAGAAAAAAA TGTA TAAA TACA GAAAATTTTTGAAAT A1C_05895 1048256 - 1048351 + | hypothetical protein A1C_05900 1048480 - 1048665 + | MFS type sugar transporter TERM 915 1048911 - 1048934 + T 73 -8.4 -3.42078 | opp_overlap 1048911 1048927 TAAATTCCAATCAAA TACTTATAAT TCAA ATTATAAGTA TTATACTAACATGTA TERM 916 1048934 - 1048911 - T 79 -8.4 -3.9444 | opp_overlap 1048911, overlap 1048927 TAAATTCCAATCAAA TACTTATAAT TCAA ATTATAAGTA TTATACTAACATGTA A1C_05905 1049482 - 1049147 - | hypothetical protein TERM 917 1049186 - 1049200 + g 72 -5.8 -4.48176 | opp_overlap 1049171 CAATAATAAATTGTA GTTATT ATT AATAAC TTTATTCGTTTTATA A1C_05910 1049626 - 1049492 - | hypothetical protein TERM 918 1050301 - 1050321 + r 85 -11.2 -2.77126 | overlap 1050298 1050297 1050303 1050318 AGTTGTTTTCCTGGA TACCGTGG ACAAG CCACGGTA TGATATATCTCTTTA TERM 919 1050303 - 1050319 + r 75 -9.4 -2.91913 | overlap 1050301 1050298 1050297 1050318 TTGTTTTCCTGGATA CCGTGG ACAAG CCACGG TATGATATATCTCTT TERM 920 1050571 - 1050585 + r 74 -8.6 -3.29273 | TTGCTATTTCGGGAC GCAAGA ATC TCTTGC TATTATGGTAATACA TERM 921 1050754 - 1050732 - R 85 -11.4 -2.80816 | TTCTTACCTACCAGA CCACCAAAGT TAA ACTTTGATGG TCGAAACTTGAGCAA TERM 922 1050807 - 1050785 - R 70 -5.6 -4.20918 | TTTAAGTTTAATAAA TCGGGCATAA TGA TTATGTCCAA CCAAAATAAAACGAC A1C_05915 1051399 - 1051217 - | hypothetical protein A1C_05920 1051963 - 1051517 - | hypothetical protein A1C_05925 1052547 - 1052410 - | hypothetical protein recA 1052846 - 1053934 + | recombinase A fabG 1053927 - 1054652 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 923 1054780 - 1054752 - f 95 -8.4 -5.48825 | gap 1, overlap 1054760 TACCAGTTAAAAAAA GTATAATAGCTGA ATAA TC-GCTATTATAC GGCATATAAAATTAA acpP 1054818 - 1055063 + | acyl carrier protein TERM 924 1055361 - 1055346 - g 74 -6.2 -4.48333 | overlap 1055358 ATAGACTAAGTAAAA TGGATA AATT TATCCA TTACGGAGTAGCAGC A1C_05945 1055099 - 1056379 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 925 1056668 - 1056684 + F 72 -8.1 -3.31144 | overlap 1056671 CTGGATTGCTTCGTC GAATTAC TAT GTAATTC TTCTCGCAATGACGG TERM 926 1057235 - 1057223 - f 71 -7.7 -3.42013 | opp_overlap 1057223, overlap 1057219 1057217 AGCTTAGAAGAGCAA GCCTT GCT AAGGC TTTAATTAGCGCCGG TERM 927 1057223 - 1057235 + F 76 -7.7 -3.90112 | opp_overlap 1057219 1057217 1057223 AGCTTAGAAGAGCAA GCCTT GCT AAGGC TTTAATTAGCGCCGG A1C_05960 1057827 - 1058924 + | hypothetical protein A1C_05965 1058954 - 1059190 + | hypothetical protein TERM 928 1059196 - 1059227 + T 100 -13.2 -3.12352 | opp_overlap 1059193 1059191 1059201, overlap 1059190 1059199 AATAATGTAACATTC TAAGAGCTGTAACT ACAT AGTTGCAGCTCTTG TATCATTTTGAATTA TERM 929 1059199 - 1059224 + T 100 -12.7 -3.68757 | opp_overlap 1059193 1059191 1059201, overlap 1059196 1059190 AATGTAACATTCTAA GAGCTGTAACT ACAT AGTTGCAGCTC TTGTATCATTTTGAA A1C_05970 1059752 - 1059564 - | ATPase A1C_05975 1059927 - 1059745 - | hypothetical protein A1C_05980 1060235 - 1060116 - | ATPase gmk 1061095 - 1060517 - | guanylate kinase A1C_05990 1061460 - 1061224 - | hypothetical protein TERM 930 1061548 - 1061575 + r 74 -7.8 -3.76379 | gap 1 GATACCACCACGTCA TTGCGA-GCAGTC GTA GACTGCGTGGCAA TTTCATCAAATATTC A1C_05995 1062872 - 1062033 - | rod shape-determining protein MreC A1C_06000 1063915 - 1062875 - | rod shape-determining protein MreB A1C_06005 1065213 - 1064125 - | hypothetical protein TERM 931 1065586 - 1065568 - R 80 -6.7 -4.83246 | opp_overlap 1065568 GTATAAACAAAGAAA GCCGAGT AGTAA ACTCGAC CTTTTAGGATACTAT A1C_06010 1066084 - 1065617 - | peptidoglycan-associated lipoprotein precursor A1C_06015 1067372 - 1066419 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 932 1066687 - 1066714 + g 81 -4.3 -5.48063 | gap 1 CTGAATTGATTAGTA TGCAGCAAATCT TCTAT AGA-TTGTTGCA TTTTTTCTATTGCAT rpmF 1067580 - 1067380 - | 50S ribosomal protein L32 A1C_06025 1067676 - 1068149 + | hypothetical protein TERM 933 1068264 - 1068223 - f 95 -11.9 -3.40611 | opp_overlap 1068226 1068232 1068261, overlap 1068232 GTCATTCTAATAATA CTTGATAAACCTATAAAAA CAAG TTTTTATAGGTTTATCTGG ATTCCCGCCTACATG TERM 934 1068226 - 1068261 + F 100 -16.6 -2.52896 | opp_overlap 1068223 1068232, overlap 1068232 ATTCTAATAATACTT GATAAACCTATAAAAA CAAG TTTTTATAGGTTTATC TGGATTCCCGCCTAC TERM 935 1068255 - 1068232 - f 90 -9.8 -3.93004 | opp_overlap 1068226 1068232, overlap 1068223 ATAATACTTGATAAA CCTATAAAAA CAAG TTTTTATAGG TTTATCTGGATTCCC TERM 936 1068232 - 1068255 + F 91 -9.8 -4.09108 | opp_overlap 1068232 1068223, overlap 1068226 ATAATACTTGATAAA CCTATAAAAA CAAG TTTTTATAGG TTTATCTGGATTCCC TERM 937 1068261 - 1068288 + F 89 -12.1 -2.70932 | opp_overlap 1068223 TTTTTATAGGTTTAT CTGGATTCCCG CCTACA TGGGAATCCAG TCATTACAAAACAAA A1C_06030 1068315 - 1069226 + | Signal recognition particle-docking protein FtsY TERM 938 1069504 - 1069529 + G 71 -7.5 -3.38314 | opp_overlap 1069502, overlap 1069505 1069507 CAACAACATTTAACT TCACCGAAAGG TGAG CCTGTCGGTGC TCTTTACGGCTTCAC TERM 939 1069505 - 1069528 + G 82 -11 -2.62667 | opp_overlap 1069502, overlap 1069504 1069507 AACAACATTTAACTT CACCGAAAGG TGAG CCTGTCGGTG CTCTTTACGGCTTCA TERM 940 1069759 - 1069746 - g 100 -8.1 -5.626 | TATTCTAGAAAAAAA CGGCT ATGA AGCCG ATGACATTATTGCAA TERM 941 1071690 - 1071679 - g 73 -4.4 -4.9448 | opp_overlap 1071679, overlap 1071674 ATGGAGCAAACAAAA GCTT TTGC AAGC AGCAACGGCTATGTC A1C_06035 1069423 - 1072041 + | DNA polymerase I TERM 942 1072171 - 1072114 - f 100 -15.2 -3.09635 | gap 1, opp_overlap 1072114 1072114 1072126 ATTGCTAGGATCGAA GCGACGTGGCAATCCAGAAAAATAATT AAAAA AATT-TTTTGCTGGATTGCTTCGTCGC ATTACTACGTAATTC TERM 943 1072114 - 1072172 + F 91 -11.4 -3.20703 | opp_overlap 1072114, overlap 1072114 1072126 ATTGCTAGGATCGAA -GCGACGTGGCAATCCAGAAAAATAATT AAAAA AATT-TTTTGCTGGATTGCTTCGTCGCA TTACTACGTAATTCT TERM 944 1072114 - 1072171 + F 100 -17.4 -2.5194 | gap 1, opp_overlap 1072114, overlap 1072114 1072126 ATTGCTAGGATCGAA GCGACGTGGCAATCCAGAAAAATAATT AAAAA AATT-TTTTGCTGGATTGCTTCGTCGC ATTACTACGTAATTC TERM 945 1073753 - 1073718 - g 71 -3.2 -5.15634 | gap 1, opp_overlap 1073718, overlap 1073720 CATGCTATCAAAAAA CGGCTTCTT-ACGGTCA TTT CGGCCGTGAAGACGCAG ATTTTACATGGGAGA A1C_06040 1072655 - 1073797 + | S-adenosylmethionine synthetase TERM 946 1074568 - 1074580 + G 90 -9.1 -4.68994 | opp_overlap 1074567 1074566 ACACTCAAAAAATTC GCCTG TAT CAGGC TTTTTGGATGATGCT A1C_06045 1074278 - 1074622 + | hypothetical protein dnaE 1078728 - 1075171 - | DNA polymerase III subunit alpha TERM 947 1078104 - 1078092 - G 71 -7.7 -3.39896 | opp_overlap 1078100 1078102 1078103, overlap 1078076 CTGATATACATAACA GCACA TCA TGTGC ATCATGCATGCTTTT TERM 948 1078781 - 1078798 + r 71 -5.5 -4.37346 | TGTATCACCACGTTG CTTGACC ACTT GGTCCAG TCTTTTTTAATTTTT A1C_06055 1080181 - 1078877 - | UDP-glucose 6-dehydrogenase TERM 949 1081205 - 1081191 - g 73 -4.4 -5.06585 | opp_overlap 1081191 TAAATTAGATAAAAA TTTTTT AAA AAAAAA TATTTTAGTAGAAGA TERM 950 1081574 - 1081552 - g 71 -7.8 -3.46873 | overlap 1081550 GCAAATTCAATAATA GAGCTAATAA TTC CTATTAGCCC AAATATCCCTAATAG TERM 951 1082893 - 1082879 - g 72 -5.7 -4.42238 | CTATTGTAACTAAAA TACCG GTAGT CGGTA AAATATTTTCCAAAG A1C_06060 1080430 - 1082943 + | hypothetical protein A1C_06065 1082953 - 1084218 + | ampG protein A1C_06070 1084285 - 1085040 + | Sec-independent protein translocase protein TatC TERM 952 1086021 - 1086009 - g 79 -2.7 -5.75342 | overlap 1086010 TTGCGGCAAAAAAAA CCTAT GAT ATAGA GGTGTGGCTTCCGGG A1C_06075 1085018 - 1086295 + | seryl-tRNA synthetase TERM 953 1086487 - 1086459 - f 79 -5.5 -5.14563 | opp_overlap 1086468, overlap 1086460 GGGTCCAGCAAAAAA CTTACAATACTAA TTT TTAGTATTACAAA CTAGACCCCGTGGTC TERM 954 1086513 - 1086493 - f 70 -8.2 -3.07455 | overlap 1086491 1086488 1086509 GTATTACAAACTAGA CCCCGTGG TCAAG CCACGTGG TGACACAGTATACAA TERM 955 1087431 - 1087410 - g 71 -3 -5.14563 | TTTGTTAGCAAAAAA CACGTAAT ATCCAA ATTGCGTG GTCAAGATTATATTC A1C_06080 1086555 - 1088987 + | Type IV secretion/conjugal transfer ATPase, VirB4 family protein TERM 956 1089461 - 1089451 - g 79 -6.8 -4.63218 | CTCCTTGGAATAAAA GCGA CGG TCGC GATCATGATACTTGT TERM 957 1090326 - 1090313 - g 71 -3.1 -5.31877 | ATGTAGCATAAAAAA TACCC CAGA GGATA TTCAGAAAGGAAAAC TERM 958 1092360 - 1092348 - g 79 -3.3 -5.64421 | ATCTTAAACAAAAAA CCGGT ACA ACAGG GAAGCATTATGTCAT A1C_06085 1089243 - 1092779 + | hypothetical protein TERM 959 1092980 - 1092998 + G 88 -11.8 -2.95884 | opp_overlap 1092977 GTGAATATTATACTT GCTTTCTC ATT GAGAAAGC TATGTCCCTTGATAA A1C_06090 1092784 - 1093689 + | tellurium resistance protein TerC A1C_06095 1093732 - 1094445 + | hypothetical protein A1C_06100 1094611 - 1096266 + | hypothetical protein TERM 960 1096562 - 1096578 + G 74 -5.9 -4.72333 | GTGCAGGACTTATGA TTTTGCT TGG AGCAGAA TTTTTAGCTATGATT A1C_06105 1096432 - 1097049 + | NADH dehydrogenase subunit J A1C_06110 1097042 - 1097356 + | NADH dehydrogenase subunit K TERM 961 1098541 - 1098551 + G 74 -6.8 -4.3467 | TAATAGGAATTTATC CCCT TGC AGGG TTTTACTCTAAAGAT TERM 962 1099013 - 1098998 - g 81 -3.2 -5.74684 | overlap 1099001 1099002 TAATAAAAATAAAAA CAACTG GATC CAGTGG TCAAGCCACGGGATC A1C_06115 1097358 - 1099328 + | NADH dehydrogenase subunit L TERM 963 1099339 - 1099374 + F 100 -10.8 -4.52345 | opp_overlap 1099349, overlap 1099349 CTTGACAACGGGGTC CAGTTAAAAATACTAA ATTA TTAGTATTTTTAGTTG TTTGTTTGATACTGT TERM 964 1099349 - 1099364 + F 75 -4.8 -5.05712 | opp_overlap 1099349, overlap 1099339 GGGTCCAGTTAAAAA TACTAA ATTA TTAGTA TTTTTAGTTGTTTGT TERM 965 1100112 - 1100124 + G 74 -6.3 -4.46926 | overlap 1100115 GATAATATTCCGTTA TTTGC TCA GCAAA TTTTATGGTGGGCTA TERM 966 1100135 - 1100150 + G 73 -7.6 -3.66654 | overlap 1100115 GCAAATTTTATGGTG GGCTAT CTTT ATAGCC TTTGCCATTAAAATC TERM 967 1100606 - 1100618 + G 76 -3.4 -5.37345 | opp_overlap 1100606 AGCAAGTAAAATGCA TGTG CTTGC CACA TTTTTTATGATTGCA A1C_06120 1099479 - 1100960 + | NADH dehydrogenase subunit M A1C_06125 1100961 - 1101065 + | hypothetical protein TERM 968 1101243 - 1101223 - f 72 -7.6 -3.70636 | AAGCAACAGATATAA TACCGTGG TCAAG CCACAGTA TCCATAAAAGCAAGG TERM 969 1101303 - 1101283 - f 89 -11.9 -2.80291 | overlap 1101285 AATCATTTTACTAGA TACCGTGGC TTG ACCACGGTA TGACAGAGACATGCT TERM 970 1101301 - 1101285 - f 77 -10.1 -2.94747 | overlap 1101283 TCATTTTACTAGATA CCGTGGC TTG ACCACGG TATGACAGAGACATG A1C_06130 1101314 - 1101934 + | cytochrome c biogenesis protein CcmA A1C_06135 1103006 - 1102527 - | NADH dehydrogenase subunit I TERM 971 1102884 - 1102894 + g 71 -3.2 -5.14965 | ACCCTTAAATCTAGG GCTA ACA TGGC TTTTTTCATAAGGAT TERM 972 1103243 - 1103233 - g 71 -3.2 -5.14965 | ATCCTTATGAAAAAA GCCA TGT TAGC CCTAGATTTTAAGGG A1C_06140 1103224 - 1103394 + | NADH dehydrogenase subunit H A1C_06145 1104552 - 1103533 - | NADH dehydrogenase subunit H A1C_06150 1106715 - 1104700 - | NADH dehydrogenase subunit G TERM 973 1105775 - 1105758 - G 77 -8.5 -3.57406 | overlap 1105756 1105772 TTTTCAGCATAAACA TTGCTTC AACA GAAGCAA GAGAACCTGCAATAG A1C_06155 1107073 - 1106717 - | hypothetical protein A1C_06160 1107324 - 1107088 - | hypothetical protein A1C_06165 1107557 - 1107396 - | hypothetical protein A1C_06180 1110594 - 1107958 - | aconitate hydratase TERM 974 1108245 - 1108223 - G 74 -7.1 -3.98282 | CCCATACCAACTAAA TTTGAACGA TGTAT TCGCTCAAA GCTCTCGGCAATCAC TERM 975 1110371 - 1110381 + g 71 -3.2 -5.27779 | GGCATAAAATCTATT TCTG CAT CGGA TTTTTTAGTGTTCAG atpC 1111128 - 1110790 - | F0F1 ATP synthase subunit epsilon TERM 976 1111219 - 1111205 - R 93 -4.3 -6.25741 | opp_overlap 1111205 AAATAATAAAAAAAA TGCTA TAAAT TAGCA TTTTTACTGGATTGC A1C_06190 1112738 - 1111317 - | F0F1 ATP synthase subunit beta TERM 977 1112808 - 1112779 - R 100 -13 -3.21354 | TTACATAGTTACCAA TGTCATTCCCGC GCGTAG GCGAGAATGACA TAATACACATATCTA A1C_06195 1113687 - 1112821 - | F0F1 ATP synthase subunit gamma TERM 978 1113283 - 1113293 + g 74 -5.4 -4.81685 | overlap 1113291 ACTATCAATATAACT TGCA TAT TGCA TTTTTAGTGCTTCGT TERM 979 1113784 - 1113764 - R 91 -11.2 -3.06915 | overlap 1113776 ACTTATTTTACTGAA TGCCGTGA TCAAG TCACGGCA TGACACAATAGGCTT A1C_06200 1115315 - 1113777 - | F0F1 ATP synthase subunit alpha A1C_06205 1116000 - 1115446 - | F0F1 ATP synthase subunit delta A1C_06210 1117376 - 1115997 - | dihydrolipoamide dehydrogenase A1C_06215 1117908 - 1117480 - | Strees induced DNA-binding protein A1C_06220 1118395 - 1118207 - | hypothetical protein A1C_06225 1118604 - 1119695 + | hypothetical protein A1C_06240 1123049 - 1120674 - | 1A family penicillin-binding protein A1C_06245 1124390 - 1123053 - | hypothetical protein A1C_06250 1124644 - 1124495 - | hypothetical protein A1C_06255 1125109 - 1124933 - | hypothetical protein A1C_06270 1126661 - 1126182 - | hypothetical protein A1C_06275 1128381 - 1126654 - | glutathione-regulated potassium-efflux system protein kefB TERM 980 1128261 - 1128275 + g 72 -8.6 -3.05596 | opp_overlap 1128249 1128248 AACCGTGATCACCTA TTGCAG CTC CTGCAA TTAAGTAACCAAGTA A1C_06280 1128704 - 1128378 - | Iojap-related protein A1C_06285 1128870 - 1129109 + | hypothetical protein TERM 981 1129223 - 1129249 + F 100 -14 -3.68073 | TAAATATAACTTTTG TATTAGTCAACA ATA TGTTGACTAATA TTCTTAAATAGAGTA TERM 982 1129377 - 1129367 - g 84 -5.4 -5.3689 | ACAAACAAAAGAAAA GCTA TAT TAGC AAAATTAGCACAACT A1C_06290 1129295 - 1129435 + | hypothetical protein A1C_06295 1129551 - 1129874 + | Phage-related transcriptional regulator TERM 983 1130428 - 1130443 + F 90 -4.8 -5.80727 | opp_overlap 1130428 GCAATCCAGTTAAAA TACTAA ATTA TTAGTA TTTTTTATTATTTTT infA 1130725 - 1130940 + | translation initiation factor IF-1 TERM 984 1131351 - 1131340 - g 77 -3 -5.65927 | opp_overlap 1131340 CAGTTAAACAAAAAA TAGT TCAG ACTA TTGTTAAGTTTAAAA A1C_06305 1130952 - 1131557 + | Maf-like protein A1C_06310 1132287 - 1131856 - | DnaK suppressor protein xerC 1133303 - 1132386 - | site-specific tyrosine recombinase XerC TERM 985 1133445 - 1133430 - H 78 -3.4 -5.65678 | opp_overlap 1133430, overlap 1133423 1133421 ATAAAACACAAAAAA TTTTTT GAGT AAAAAA TTTAATTTATTTTAG A1C_06320 1133472 - 1133951 + | phasin family protein A1C_06325 1134712 - 1134110 - | phospholipase D (PLD) superfamily protein TERM 986 1134797 - 1134755 - R 89 -9.3 -4.258 | gap 1, overlap 1134757 1134759 1134792 GTATGGATCAAGAAA CAC-ACATTGTCATTCACGC GTAG GCGGGAATGACAATGAAGTA ATAACACCTACTTCC TERM 987 1134794 - 1134757 - R 95 -12.1 -3.72775 | overlap 1134755 1134759 1134792 ATGGATCAAGAAACA CACATTGTCATTCACGC GTAG GCGGGAATGACAATGAA GTAATAACACCTACT TERM 988 1134792 - 1134759 - R 100 -16.9 -3.43925 | overlap 1134757 1134755 GGATCAAGAAACACA CATTGTCATTCACGC GTAG GCGGGAATGACAATG AAGTAATAACACCTA A1C_06330 1136556 - 1134805 - | Poly(3-hydroxyalkanoate) synthetase A1C_06335 1138116 - 1136638 - | UbiD family decarboxylase TERM 989 1137538 - 1137560 + g 70 -7.1 -3.70863 | opp_overlap 1137537 1137534 1137541, overlap 1137541 CTTTAACCAACGCAT CAATAGCTT ATTAG GAGCTATTG TTTGCATCCTATATA A1C_06340 1139896 - 1138322 - | parvulin-like peptidyl-prolyl isomerase TERM 990 1138408 - 1138418 + g 75 -2.6 -5.66684 | overlap 1138402 CAGAATTTTTAATAT TATA TAT TATA TTTTTTTCTGAATTG TERM 991 1140036 - 1140012 - R 100 -14.5 -5.42514 | opp_overlap 1140012 TTATAAAGCAAAAAA GCCTATATAGT CAA ACTATATAGGC TTTTTTATTATTTTT TERM 992 1140012 - 1140036 + r 100 -14.5 -5.80727 | opp_overlap 1140012 TTATAAAGCAAAAAA GCCTATATAGT CAA ACTATATAGGC TTTTTTATTATTTTT TERM 993 1140850 - 1140836 - R 74 -7.2 -3.96291 | opp_overlap 1140838 TATAAACCGTATAAA GAGTAA ATA TTACTC TCTACCTCATTCTTA A1C_06355 1141208 - 1141002 - | hypothetical protein A1C_06360 1141397 - 1141269 - | 190-kDa cell surface antigen A1C_06365 1142210 - 1141500 - | 190-kDa cell surface antigen A1C_06370 1143022 - 1142468 - | Outer memberane protein rOmpA A1C_06375 1143387 - 1142989 - | Outer memberane protein rOmpA A1C_06380 1143637 - 1143539 - | hypothetical protein A1C_06385 1144294 - 1143803 - | 190-kDa cell surface antigen TERM 994 1144090 - 1144104 + g 70 -7.1 -3.60214 | overlap 1144087 AAGGATGACCATTAG CGGCT CCTCC AGCCG TTATATCATTCAAAT TERM 995 1144327 - 1144315 - R 70 -3.5 -5.11112 | opp_overlap 1144304 1144315, overlap 1144304 1144320 1144323 AAACTTTAATAAAAA TTAAA TAA TTTAA TAATTAAATATAAGT A1C_06390 1146840 - 1144603 - | cell division protein FtsK-like protein TERM 996 1146309 - 1146296 - G 70 -3.9 -5.11613 | ACATTATGTAAAAAA TATTG TATC CAATA GGTTAAAAATGTACT A1C_06395 1146993 - 1147784 + | methionine aminopeptidase TERM 997 1147846 - 1147836 - f 78 -4 -5.42259 | TCATTGCGAAAAAAA TTAC GAA GTAA TGTGACGAAGCAATC TERM 998 1147886 - 1147872 - f 75 -4.3 -5.18357 | opp_overlap 1147865 1147872 CAATCCAGTAAAAAA TTCTG ATTTA CAGAA TTTTTTTAATTATTT TERM 999 1147872 - 1147886 + F 88 -4.3 -5.73672 | opp_overlap 1147872, overlap 1147865 CAATCCAGTAAAAAA TTCTG ATTTA CAGAA TTTTTTTAATTATTT TERM 1000 1148298 - 1148314 + F 79 -8.1 -3.93256 | ATTTTTCCGATTACG CATTACT TGT AGTAATG TTATTTACGACTATC TERM 1001 1149040 - 1149026 - g 81 -9.2 -3.77808 | opp_overlap 1149030 CTCATGATAAGATAA CACCGC GCG GCGGCG GTCTCGCTATTGTCA A1C_06410 1148887 - 1149870 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase A1C_06415 1149867 - 1150193 + | hypothetical protein TERM 1002 1150430 - 1150420 - T 70 -4 -4.99035 | TCATTGAGAGAAAAA TTAC GTA GTAA TTCGACGAAGCAATC TERM 1003 1150446 - 1150481 + T 72 -5.1 -4.77157 | gap 1, opp_overlap 1150456, overlap 1150456 TTCGACGAAGCAATC TAGTAA-AAAATTCTG ATTTA CAGAATTTTTTTATTA TTTTTGCTGGATTGC TERM 1004 1150470 - 1150456 - T 75 -4.3 -5.18357 | opp_overlap 1150446 1150456 CAATCTAGTAAAAAA TTCTG ATTTA CAGAA TTTTTTTATTATTTT TERM 1005 1150456 - 1150470 + T 91 -4.3 -6.04419 | opp_overlap 1150456, overlap 1150446 CAATCTAGTAAAAAA TTCTG ATTTA CAGAA TTTTTTTATTATTTT TERM 1006 1150565 - 1150588 + T 100 -14 -4.89233 | opp_overlap 1150565 ACAGCAATAAAAAAA GGAGCCTTTA ATAT TAAAGGCTCC TTTTTCGTGTTAATA TERM 1007 1150588 - 1150565 - T 100 -14 -5.85737 | opp_overlap 1150565 ACAGCAATAAAAAAA GGAGCCTTTA ATAT TAAAGGCTCC TTTTTCGTGTTAATA A1C_06420 1151462 - 1150629 - | hypothetical protein TERM 1008 1151597 - 1151613 + r 76 -5.1 -5.01497 | ATCACTCCATTGCTT GACCAGA GAG TCTAGTC TTTTTGTGTACTACT A1C_06425 1152371 - 1151697 - | putative outer surface protein A1C_06430 1152849 - 1152520 - | ferredoxin A1C_06435 1153546 - 1152854 - | Heme exporter protein C TERM 1009 1153637 - 1153675 + r 85 -7.2 -4.87665 | gap 1, opp_overlap 1153640 1153647, overlap 1153641 CTTGATCGCGGGATC TAAC-TAAAAATACTAA GATTTA TTAGTATTTTTAAGTTA TTTTTATGGATACCA A1C_06440 1154234 - 1153755 - | cytosine deaminase TERM 1010 1154071 - 1154098 + g 72 -2.8 -5.37593 | GCGTTGTTTTTTTCT TCGGTATTATTA TGAC TATTAATAACGA TTTTTTGATTTAACC A1C_06445 1155120 - 1154215 - | cation diffusion facilitator family transporter TERM 1011 1155163 - 1155187 + H 81 -9.5 -3.58533 | opp_overlap 1155163 AGTTTAACAAAGAAA GTATAAAATTC AAT GAGTTTTATAC TTTACAAAATTCTAA TERM 1012 1155187 - 1155163 - H 81 -7.3 -4.68209 | opp_overlap 1155163 AGTTTAACAAAGAAA GTATAAAATTC AAT GAGTTTTATAC TTTACAAAATTCTAA TERM 1013 1155691 - 1155674 - g 76 -3.4 -5.4593 | overlap 1155689 GGAAAACAACAAAAA GCATAC GGTAAT GCATGC CGCCAACCTGACGGA A1C_06450 1155248 - 1155727 + | 17 kD surface antigen precursor A1C_06455 1155882 - 1156094 + | hypothetical protein TERM 1014 1156435 - 1156401 - f 72 -4.5 -4.91712 | opp_overlap 1156411, overlap 1156404 1156411 GGTAATCCAGAAAAA TAATAAAAAATTCTG TAAAT CAGAATTTTTCACTG GATTTCTTCGTCAAA TERM 1015 1156432 - 1156404 - f 85 -8.4 -4.55383 | opp_overlap 1156411, overlap 1156401 1156411 AATCCAGAAAAATAA TAAAAAATTCTG TAAAT CAGAATTTTTCA CTGGATTTCTTCGTC TERM 1016 1156425 - 1156411 - f 88 -4.3 -5.80727 | opp_overlap 1156411, overlap 1156404 1156401 AAAAATAATAAAAAA TTCTG TAAAT CAGAA TTTTTCACTGGATTT A1C_06460 1156530 - 1157231 + | Zinc ABC transporter ATP-binding protein uvrA 1160095 - 1157234 - | excinuclease ABC subunit A TERM 1017 1158376 - 1158366 - G 70 -8.2 -3.02144 | opp_overlap 1158368 CGACCGCCGTGAATA CCGG CTC CCGG GCCTATATCAATAAT TERM 1018 1158693 - 1158707 + g 81 -4.3 -5.43974 | TTGAGAATACGCTCA GCAAT AAATA ATTGC TTTTTATTTAATTTT A1C_06470 1160204 - 1160662 + | single-strand DNA-binding protein TERM 1019 1160701 - 1160691 - f 72 -4 -5.08601 | TCATTGCAAGAAAAA TTAC GTG GTAA TTCGACGAAGCAATC TERM 1020 1160720 - 1160749 + F 71 -4.6 -4.73105 | gap 1, opp_overlap 1160727, overlap 1160721 1160727 GACGAAGCAATCCAG TA-AAAAATTCTG TAAAT CAGAATTTTTGTA TTATTTTTTCTAGAT TERM 1021 1160727 - 1160741 + F 75 -4.3 -5.25799 | opp_overlap 1160727, overlap 1160721 1160720 CAATCCAGTAAAAAA TTCTG TAAAT CAGAA TTTTTGTATTATTTT TERM 1022 1160741 - 1160727 - f 75 -4.3 -5.18357 | opp_overlap 1160721 1160720 1160727 CAATCCAGTAAAAAA TTCTG TAAAT CAGAA TTTTTGTATTATTTT A1C_06475 1160868 - 1161695 + | DAP2-like protein A1C_06480 1161937 - 1162494 + | MFS type sugar transporter A1C_06485 1162724 - 1162894 + | MFS type sugar transporter A1C_06490 1163143 - 1163039 - | hypothetical protein A1C_06495 1163460 - 1163344 - | hypothetical protein A1C_06500 1164184 - 1163990 - | hypothetical protein A1C_06505 1164338 - 1164228 - | hypothetical protein A1C_06510 1165200 - 1165517 + | hypothetical protein TERM 1023 1165749 - 1165770 + G 70 -4.5 -4.83169 | AATTTAATGATTCAC TCTCTGTAT AGCA ATAAAGAGA TTTTTATGAGGGAGT A1C_06515 1165686 - 1167551 + | heat shock protein 90 TERM 1024 1167985 - 1167999 + G 71 -8.6 -2.80612 | overlap 1167984 ACTCGCAATATCGGC GGCAAT AAT ATTGCC ATTCTTGAGCTTGAA A1C_06520 1167736 - 1168980 + | 5-aminolevulinate synthase A1C_06525 1169241 - 1169696 + | hypothetical protein TERM 1025 1170073 - 1170052 - f 71 -7.4 -3.75665 | CTATATGCCAGCAAA TGTGAGTT TTGCAC AACTCACA GTTAGCAATTCCTAA TERM 1026 1170650 - 1170629 - g 71 -3 -5.1356 | CCGCATTAACAAAAA GCTATACT AAAGAA AGTAAAGC AAAAATAAAAGATGG TERM 1027 1170911 - 1170898 - g 74 -6.7 -4.16182 | GCAGTACAAATTAAA GCAGT ACAT ACTGC AGAACCTACCGTTAT tig 1170181 - 1171518 + | trigger factor obgE 1172724 - 1171732 - | GTPase ObgE gltA 1174249 - 1172942 - | type II citrate synthase TERM 1028 1174158 - 1174180 + g 77 -10 -2.76651 | opp_overlap 1174152 TCGATTACATCCTCA CCTATACTTG CTT TAAGTATAGG TAATTGAAATATTTT A1C_06545 1174792 - 1174616 - | transcriptional regulator A1C_06550 1175978 - 1174989 - | N-terminus of bacteriophage-type DNA polymerase A1C_06555 1175941 - 1176930 + | ribosomal large subunit pseudouridine synthase, RluD subfamily protein A1C_06560 1177943 - 1178068 + | hypothetical protein A1C_06565 1178163 - 1178429 + | growth inhibitor TERM 1029 1179332 - 1179306 - g 71 -8.2 -3.33525 | overlap 1179304 TGCAGTCACATAATA GAGTAATAGA AATATCG TCTATTACTC TCAATCGGTCATACG A1C_06570 1178414 - 1179982 + | bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase A1C_06575 1180886 - 1179948 - | hypothetical protein glyS 1182953 - 1180965 - | glycyl-tRNA synthetase subunit beta glyQ 1183815 - 1182946 - | glycyl-tRNA synthetase subunit alpha A1C_06590 1183981 - 1183847 - | hypothetical protein TERM 1030 1183910 - 1183922 + g 72 -3.5 -5.19998 | GGTATTTCTAGTAAC TAATA TCA TATTA TTTTGTTTTGCTTGT A1C_06595 1184896 - 1184267 - | hypothetical protein A1C_06600 1185396 - 1184905 - | proline/betaine transporter TERM 1031 1185009 - 1184957 - GR 73 -8 -3.49226 | gap 1, opp_overlap 1184987, overlap 1184960 1184987 AATTTTAGAAGAATA GAAGACAATAATGCAAGTGCA-ATT AAAT AATATGCAATAGCATAATTGTCTCC GGTCACTTTCGTTAA A1C_06605 1186151 - 1185345 - | proline/betaine transporter TERM 1032 1186363 - 1186349 - R 95 -7.2 -5.73672 | opp_overlap 1186349 1186350 AAATAATTAAAAAAA TGCTAA AAA TTAGCA TTTTTAACTGAATTG TERM 1033 1186349 - 1186363 + r 81 -7.2 -4.68424 | opp_overlap 1186349, overlap 1186350 AAATAATTAAAAAAA TGCTAA AAA TTAGCA TTTTTAACTGAATTG A1C_06610 1187472 - 1186519 - | hypothetical protein A1C_06615 1188120 - 1187482 - | hypothetical protein TERM 1034 1188246 - 1188274 + r 78 -6.2 -4.73105 | opp_overlap 1188253, overlap 1188243 1188253 AACGAAGCAATCCAG TAAAAAATTCTG ATTTA CAGAATTTTTGA TTATTTTTTCTGGAT TERM 1035 1188253 - 1188267 + r 72 -4.3 -5.10004 | opp_overlap 1188253, overlap 1188246 1188243 CAATCCAGTAAAAAA TTCTG ATTTA CAGAA TTTTTGATTATTTTT TERM 1036 1188267 - 1188253 - R 75 -4.3 -5.18357 | opp_overlap 1188253 1188246 1188243 CAATCCAGTAAAAAA TTCTG ATTTA CAGAA TTTTTGATTATTTTT TERM 1037 1188363 - 1188380 + r 86 -9.9 -3.81447 | opp_overlap 1188341 1188362 1188365 CGCTTCCGCAGGAAT GACCTAG AATA CTAGGTC TTATTGTCAACTATA A1C_06620 1189945 - 1188374 - | hypothetical protein TERM 1038 1188848 - 1188880 + g 75 -9.4 -2.81181 | overlap 1188846 1188843 TATATCTTTGTAATT CTGGTTTGTATTAT ATTTA ATAATACAAACCAC TAATATTAATATTAT TERM 1039 1189974 - 1190005 + H 80 -6.6 -4.75289 | gap 1, opp_overlap 1189974 TTACTATATGCAAAG TCAGACCTGCGTAAC ATT GTTGCGT-GGACTGA TTTTCTGTTGTCATC TERM 1040 1191939 - 1191949 + G 71 -6.8 -4.08307 | CAAAAAGGTTCGTTA GTCG CTC CGAC TTATTTACGTTTTGA alaS 1190166 - 1192802 + | alanyl-tRNA synthetase A1C_06630 1193342 - 1193016 - | hypothetical protein A1C_06635 1193768 - 1193544 - | hypothetical protein truA 1194278 - 1194006 - | tRNA pseudouridine synthase A A1C_06645 1194474 - 1194244 - | hypothetical protein TERM 1041 1194290 - 1194306 + gr 90 -9.5 -4.19678 | TCAATAGTATTTTTT GCAGATT GAT AATCTGC TTTATTGAAATATGC A1C_06650 1194672 - 1194517 - | hypothetical protein A1C_06655 1195133 - 1194849 - | hypothetical protein A1C_06660 1196019 - 1195282 - | tRNA pseudouridine synthase A A1C_06665 1198135 - 1196228 - | RNA polymerase sigma factor RpoD TERM 1042 1197354 - 1197382 + g 100 -8.5 -5.36314 | opp_overlap 1197359 1197362, overlap 1197356 ATTTCCGAAACTTCA TGTAATAATAATT CCA AATTATTATTATA TTTTTTGCTATTTTG TERM 1043 1197356 - 1197380 + g 88 -8.9 -4.27753 | opp_overlap 1197359 1197362, overlap 1197354 TTCCGAAACTTCATG TAATAATAATT CCA AATTATTATTA TATTTTTTGCTATTT dnaG 1199966 - 1198179 - | DNA primase A1C_06675 1200585 - 1199971 - | dolichol kinase TERM 1044 1200790 - 1200759 - H 88 -9 -4.4195 | opp_overlap 1200762, overlap 1200762 ACATATTTGATAAAA TAAGCATATAAAAA CTTG TTTTTATATGCTTT ACTGGATTCCTGCCT TERM 1045 1200787 - 1200762 - H 100 -10.7 -4.32067 | opp_overlap 1200762, overlap 1200759 TATTTGATAAAATAA GCATATAAAAA CTTG TTTTTATATGC TTTACTGGATTCCTG TERM 1046 1200762 - 1200787 + H 91 -10.7 -3.80114 | opp_overlap 1200759 1200762 TATTTGATAAAATAA GCATATAAAAA CTTG TTTTTATATGC TTTACTGGATTCCTG greA 1200875 - 1201453 + | transcription elongation factor GreA TERM 1047 1201516 - 1201530 + T 93 -4.3 -6.23317 | opp_overlap 1201516, overlap 1201526 CAATCCAGTTAAAAA TTCTG ATTTA CAGAA TTTTTTTGTTTTTCT A1C_06685 1202018 - 1201620 - | NAD(P) transhydrogenase subunit alpha A1C_06690 1203216 - 1202095 - | NAD(P) transhydrogenase subunit alpha TERM 1048 1202581 - 1202569 - G 74 -6.3 -4.46112 | opp_overlap 1202569 1202568 TTCCAGTGAAACAAA CTTAG CTC CTAAG CTTTCTACCTGCTCT A1C_06695 1203285 - 1203923 + | hypothetical protein TERM 1049 1204424 - 1204436 + G 73 -7.7 -3.64984 | opp_overlap 1204417 1204421, overlap 1204422 TTTTAAACGATAGGC TAGCC GGA GGCTA TCTTTTAACGGGTAT A1C_06700 1204294 - 1205823 + | DNA polymerase III subunits gamma and tau A1C_06705 1205835 - 1206158 + | hypothetical protein TERM 1050 1206289 - 1206254 - T 78 -6.5 -4.82901 | gap 1, opp_overlap 1206260 1206263, overlap 1206257 CGTGGTCCATAAAAA CAAT-AACAATACTAA TAATT TTAGTATTGTTAACTG GATCCAGTGGTCAAG TERM 1051 1206285 - 1206257 - T 100 -10.6 -4.52873 | opp_overlap 1206260 1206263, overlap 1206254 GGTCCATAAAAACAA TAACAATACTAA TAATT TTAGTATTGTTA ACTGGATCCAGTGGT TERM 1052 1206451 - 1206420 - T 80 -9 -3.71353 | AAAGAAGTCTAATAA TTCAGAATTAATAA ATCC TTATCAATCCTGAA ACTTTTAAAACGCTC A1C_06710 1207108 - 1206413 - | hypothetical protein TERM 1053 1207289 - 1207302 + r 71 -2.4 -5.40474 | overlap 1207281 1207301 CATTGCACTGGTTTA CAAC TAGCTT GTTG TTTTTTTAACAAGGT A1C_06715 1207644 - 1207342 - | beta-lactamase AmpC TERM 1054 1207785 - 1207773 - R 73 -9.1 -2.69799 | overlap 1207770 CTACTTCATACACTA GTCGG TAA CCGAC TGTGACCTCAACTTT A1C_06720 1208957 - 1208235 - | glutamine ABC transporter ATP-binding protein A1C_06725 1209725 - 1208961 - | beta-lactamase superfamily hydrolase A1C_06730 1209737 - 1210411 + | hypothetical protein A1C_06735 1210485 - 1211567 + | hypothetical protein A1C_06740 1212034 - 1211570 - | DNA polymerase III subunit chi A1C_06745 1212370 - 1212645 + | succinyl-diaminopimelate desuccinylase A1C_06750 1213784 - 1212663 - | succinyl-diaminopimelate desuccinylase A1C_06755 1214204 - 1213812 - | Type I restriction-modification system methyltransferase subunit A1C_06760 1214627 - 1214328 - | Type I restriction-modification system methyltransferase subunit A1C_06765 1214966 - 1214745 - | Type I restriction-modification system methyltransferase subunit A1C_06770 1215462 - 1215668 + | Na+/H+ antiporter NhaA A1C_06775 1216078 - 1216323 + | Na+/H+ antiporter NhaA A1C_06780 1217104 - 1216580 - | hypothetical protein lipB 1217730 - 1217101 - | lipoyltransferase A1C_06790 1218494 - 1217748 - | hypothetical protein rpsP 1219318 - 1218983 - | 30S ribosomal protein S16 rpmG 1219502 - 1219332 - | 50S ribosomal protein L33 TERM 1055 1219646 - 1219613 - R 100 -15.5 -4.09685 | opp_overlap 1219609 1219608 1219621 CTGCATTGCCTAAAA TGATATCATTTCCGC AAAA GCGGGAATGATATCA AAACGTTATGCTCCC mutL 1221509 - 1219680 - | DNA mismatch repair protein A1C_06810 1221658 - 1221506 - | hypothetical protein TERM 1056 1221544 - 1221557 + g 74 -2.3 -5.69379 | TCTTACTACAATATG GGCAG ATAA CTTCC TTTTTTTCCTTATCT A1C_06815 1221863 - 1221735 - | hypothetical protein TERM 1057 1222222 - 1222173 - H 80 -8.7 -3.8381 | opp_overlap 1222173 1222205, overlap 1222176 AGACATATTAGTAAA TAATGCCGATATTCAGATCGATA GGAG CAACATGCTGAATACCGGCATTA TTTACTAATATGTCT TERM 1058 1222557 - 1222543 - g 82 -8.6 -3.9941 | TCGTGCAGAATCAAA TAGCAG ATA CTGCTA AAGCTAGGCATATCA A1C_06835 1222470 - 1222736 + | oxidoreductase A1C_06840 1222856 - 1222975 + | hypothetical protein A1C_06845 1223031 - 1223237 + | hypothetical protein A1C_06850 1223234 - 1223332 + | hypothetical protein A1C_06855 1224633 - 1225904 + | proline/betaine transporter A1C_06860 1225888 - 1226727 + | coproporphyrinogen III oxidase TERM 1059 1226781 - 1226757 - T 72 -7.9 -3.60094 | opp_overlap 1226757, overlap 1226751 TATATAGAACCATAA CCGAAATATCA AAA CGCTATTTCGG TATGTCGAAGCATAT TERM 1060 1226880 - 1226896 + T 85 -3.8 -5.80727 | opp_overlap 1226880 AGGATCAAGTTAAAA TACTAA AATTA TTAGTA TTTTTTATTATTTTT TERM 1061 1227025 - 1227039 + T 78 -4.3 -5.42514 | opp_overlap 1227025 1227017, overlap 1227017 AAACAACTAAAAACA TTCTG TAAAT CAGAA TTTTTTACTTTGTAA A1C_06865 1227163 - 1227044 - | hypothetical protein TERM 1062 1227861 - 1227834 - R 71 -2 -5.42259 | gap 1 TTACTTCCAAAAAAA CCACC-AAGTG TTTATTT CTCTTCGGTGG TTAAAACTTGAGCAA TERM 1063 1228068 - 1228052 - R 70 -5.2 -4.59414 | overlap 1228058 TTAGAAGAACTAAAA GCAATA TTTGG TATTGC CAAAATATATATGAA A1C_06870 1228619 - 1228182 - | hypothetical protein hemH 1229665 - 1228631 - | ferrochelatase hemE 1230674 - 1229658 - | uroporphyrinogen decarboxylase TERM 1064 1230399 - 1230411 + g 72 -4.9 -4.89521 | TTTAAACTGCTTTAA TATAG GTC CTATA TTTTCTTTAAAATCT