TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.680629 %AT, 1189766 nt, 6161 terms. Intergenic: 0.694412 %AT, H2T: 249199 nt, 1729 terms; T2T: 80688 nt, 1190 terms; H2H: 87180 nt, 1488 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157826385|ref|NC_009883.1| Rickettsia bellii OSU 85-389, complete genome (length 1528980) A1I_00005 1 - 822 + | hypothetical protein A1I_00010 856 - 1215 + | thioredoxin A1I_00015 1227 - 1973 + | O-antigen export system ATP-binding protein RfbE A1I_00020 1970 - 2746 + | O-antigen export system permease protein RfbA TERM 1 3334 - 3310 - g 76 -7.2 -4.17307 | overlap 3308 3312 CAGAAAAAACAAATA GATTCCGCAA TCAAG TTGCGGAATG ACATCTTGTTTGACC TERM 2 3332 - 3312 - g 82 -9.8 -3.63489 | overlap 3310 3308 GAAAAAACAAATAGA TTCCGCAA TCAAG TTGCGGAA TGACATCTTGTTTGA A1I_00025 2743 - 5997 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase A1I_00030 6439 - 6020 - | SOS-response transcriptional repressors (RecA-mediated autopeptidases) A1I_00035 7612 - 6506 - | acyltransferase family protein A1I_00040 8665 - 7643 - | hypothetical protein TERM 3 8378 - 8346 - G 73 -7.7 -3.59803 | opp_overlap 8350 8351, overlap 8351 ACTATATGAAACCAA GGTAATTGTGCAGCA GGT TGCTGCACAAATTCT GTATCCCTATATTCT TERM 4 8350 - 8374 + g 93 -11.5 -3.61239 | opp_overlap 8346 8351, overlap 8351 TATGAAACCAAGGTA ATTGTGCAGCA GGT TGCTGCACAAA TTCTGTATCCCTATA TERM 5 8373 - 8351 - G 100 -15 -3.26998 | opp_overlap 8350 8351, overlap 8346 ATGAAACCAAGGTAA TTGTGCAGCA GGT TGCTGCACAA ATTCTGTATCCCTAT TERM 6 8351 - 8373 + g 100 -15 -2.76261 | opp_overlap 8351 8346, overlap 8350 ATGAAACCAAGGTAA TTGTGCAGCA GGT TGCTGCACAA ATTCTGTATCCCTAT A1I_00045 9265 - 8771 - | hypothetical protein A1I_00050 9829 - 9284 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase A1I_00055 11532 - 9853 - | putative inner membrane protein translocase component YidC A1I_00060 12944 - 11826 - | hypothetical protein A1I_00065 13108 - 13899 + | prolipoprotein diacylglyceryl transferase A1I_00070 13878 - 14978 + | hypothetical protein TERM 7 15086 - 15056 - T 84 -8.6 -4.33182 | opp_overlap 15063, overlap 15063 GGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCCC TERM 8 15079 - 15063 - T 95 -6.7 -5.77677 | opp_overlap 15063, overlap 15056 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 9 15063 - 15079 + T 78 -6.7 -4.67755 | opp_overlap 15063 15056 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT A1I_00075 15703 - 15224 - | hypothetical protein A1I_00080 17423 - 15696 - | glutathione-regulated potassium-efflux system protein KefB A1I_00085 17808 - 17434 - | Iojap-related protein A1I_00090 17880 - 18110 + | BolA-like protein A1I_00095 18459 - 18331 - | hypothetical protein A1I_00100 19719 - 18475 - | proline/betaine transporter A1I_00105 20591 - 19716 - | S-adenosylmethionine transporter TERM 10 20153 - 20165 + g 73 -7.7 -3.59315 | opp_overlap 20152 20153 TTTCGGGGTTAAAAT CCTCA GCA TGAGG TTTAAGCGTAATTAC A1I_00110 20743 - 21480 + | OmpW family outer-membrane protein TERM 11 21728 - 21747 + F 75 -9.4 -3.01924 | opp_overlap 21719 21717 21728 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 12 21747 - 21728 - f 76 -9.4 -3.06087 | opp_overlap 21728, overlap 21719 21717 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_00115 21905 - 22093 + | transposase A1I_00120 22099 - 22860 + | transposase A1I_00125 22959 - 24356 + | NAD(p) transhydrogenase subunit beta A1I_00130 24411 - 24980 + | hypothetical protein A1I_00135 25494 - 25138 - | putative colicin V production membrane protein TERM 13 26065 - 26043 - g 90 -9.4 -4.27259 | opp_overlap 26034, overlap 26034 26036 CATATAGATTTAAAA TCATTTTTTA AAA TAAAAAATGA TGAAATAGTAAATCC A1I_00140 25875 - 26444 + | hypothetical protein A1I_00145 26749 - 27660 + | Signal recognition particle-docking protein FtsY TERM 14 28897 - 28917 + G 71 -8.5 -2.83343 | opp_overlap 28896 28897 TTCGAGAGTGAAAAT TTTATTAAC TTA GTTAATAAA TATAGTGATGAATCT TERM 15 28917 - 28897 - g 72 -8.5 -3.13773 | opp_overlap 28897, overlap 28896 TTCGAGAGTGAAAAT TTTATTAAC TTA GTTAATAAA TATAGTGATGAATCT TERM 16 29184 - 29158 - g 76 -9.6 -3.08327 | overlap 29161 29179 AGCAAAGCCTCAACA CAAGAACTTACC TTA GATAAATTCTTG TTGCCAAAAATTTTG A1I_00160 28699 - 31131 + | hypothetical protein TERM 17 31253 - 31243 - g 95 -5.4 -6.0427 | ATGATACAAAAAAAA TTGC TGA GCAA ATAAAAGATGCTTTA A1I_00165 31206 - 31874 + | hypothetical protein A1I_00170 32335 - 33651 + | folate synthesis bifunctional protein A1I_00175 33660 - 34163 + | dihydrofolate reductase TERM 18 34365 - 34349 - g 76 -9.5 -3.05343 | opp_overlap 34349 GGTAGAGGTTTAAGA TCAGCAA GAC TTGCTGA TATATGTAGAGAGTC TERM 19 34349 - 34365 + G 76 -9.5 -2.9914 | opp_overlap 34349 GGTAGAGGTTTAAGA TCAGCAA GAC TTGCTGA TATATGTAGAGAGTC TERM 20 34392 - 34404 + G 80 -7.7 -4.16016 | AGTCAGAAGATCATT GCTCT GTT AGAGC TTTATTGCAAAGTAA recF 34181 - 35263 + | recombination protein F A1I_00185 35724 - 35581 - | hypothetical protein A1I_00190 37038 - 35905 - | TPR repeat-containing protein trmE 38464 - 37127 - | tRNA modification GTPase TrmE A1I_00200 39306 - 38545 - | transposase A1I_00205 39500 - 39312 - | transposase TERM 21 39658 - 39677 + H 76 -9.4 -3.06087 | opp_overlap 39658, overlap 39650 39646 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 22 39677 - 39658 - H 75 -9.4 -3.01924 | opp_overlap 39650 39646 39658 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 23 39807 - 39785 - H 72 -5 -4.72617 | opp_overlap 39788, overlap 39788 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 24 39804 - 39788 - H 76 -6.7 -4.42118 | opp_overlap 39788, overlap 39785 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 25 39788 - 39804 + H 78 -6.7 -4.67755 | opp_overlap 39788 39785 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT A1I_00210 39907 - 40248 + | HicB-like protein A1I_00215 40273 - 40473 + | hypothetical protein TERM 26 41079 - 41069 - g 77 -4 -5.51046 | CAAATATATAAAAAA TCTT ACC AAGA GATAAAATTGTATAA A1I_00220 40760 - 41194 + | hypothetical protein gltA 41239 - 42546 + | type II citrate synthase TERM 27 43168 - 43179 + G 70 -4.4 -4.88736 | opp_overlap 43175 GGGCTTCCTAATGCT GGTA AATC TACC TTTTTATCGGTAGTA obgE 42658 - 43644 + | GTPase ObgE A1I_00235 43704 - 44273 + | hypothetical protein TERM 28 44471 - 44451 - f 76 -9.1 -3.05844 | opp_overlap 44451 TCTTCCAGGTCAATA TGAAAACCC CAT GGATTTTCA TTATACAGAAAATGC A1I_00250 45706 - 46047 + | hypothetical protein A1I_00255 47246 - 46164 - | putative permeases A1I_00260 48030 - 47353 - | hypothetical protein TERM 29 47943 - 47929 - G 71 -2.2 -5.51078 | AAAACAAAAAGAAAA TATTCT TAA AAAATA TGCAAACAGCCCGAT A1I_00265 48045 - 48809 + | beta-lactamase superfamily hydrolase A1I_00270 48813 - 49535 + | glutamine ABC transporter ATP-binding protein TERM 30 49553 - 49540 - f 72 -6.7 -4.06687 | opp_overlap 49539 49540 ATTTTCTATAAAGAA GTGCA TTTC TGCAC CTTTTTATAGAAAAG TERM 31 49617 - 49582 - f 72 -4.2 -5.10877 | opp_overlap 49598, overlap 49583 49598 AGAATAAATTAAAAA GTATCAAAAATAAAAG GCGG CTTCCACTTTTGATAT TAATTGTTATACTTT TERM 32 49616 - 49583 - f 72 -7.7 -3.64086 | opp_overlap 49598, overlap 49582 49598 GAATAAATTAAAAAG TATCAAAAATAAAAG GCGG CTTCCACTTTTGATA TTAATTGTTATACTT A1I_00275 49621 - 50331 + | putative aspartyl protease TERM 33 51529 - 51555 + F 71 -6.6 -3.99444 | opp_overlap 51529 51527 TTTAATAAGCAAATA GCACCTTACATA TTA TATGGAAGCTGC TTTATGGATATTATT A1I_00290 51765 - 52229 + | putative integral membrane protein A1I_00295 52671 - 52468 - | hypothetical protein TERM 34 52787 - 52768 - R 80 -2.3 -5.71983 | GCAATTATAAAAAAA TATTTAA ATTGTG TTAAATA AGCGATGTATAATTT A1I_00300 53604 - 52966 - | (di)nucleoside polyphosphate hydrolase-like protein TERM 35 53058 - 53045 - G 70 -3.9 -5.01535 | opp_overlap 53045, overlap 53046 GGATAATCAGAAAAA CTAAA CCAC TTTAG TTCATGTGATTCATT A1I_00305 54496 - 53588 - | hemolysin C TERM 36 54489 - 54499 + g 82 -2.6 -6.01187 | TCTTTTTTTGAAGAT TTTA ACA TAAA TTTTTTTATTTAATT A1I_00310 55056 - 54505 - | putative metalloprotease TERM 37 54699 - 54715 + g 75 -9.5 -2.81133 | opp_overlap 54698 54701, overlap 54701 CATTATATATTACAT CATAGCA AAA TGCTATG TCTCCTAAATGCATA A1I_00315 56202 - 55135 - | lipoyl synthase glyA 57457 - 56195 - | serine hydroxymethyltransferase TERM 38 57544 - 57556 + r 72 -7.7 -3.62046 | overlap 57540 AAAAACGTCCTCGGT GTCAC CCC GTGAC TTGTTCACGGGGTCC A1I_00325 58361 - 57618 - | Serine esterase TERM 39 58328 - 58352 + g 74 -8.6 -3.33162 | overlap 58326 58330 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 40 58330 - 58350 + g 85 -11.2 -3.23393 | overlap 58326 58328 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA A1I_00330 58822 - 58466 - | glutaredoxin-like protein grla A1I_00335 58821 - 59462 + | endonuclease III TERM 41 59651 - 59621 - TR 88 -8.6 -4.47491 | opp_overlap 59628, overlap 59628 AGATCAAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 42 59628 - 59644 + Tr 78 -6.7 -4.67353 | opp_overlap 59621 59628 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 43 59644 - 59628 - TR 95 -6.7 -5.77677 | opp_overlap 59628, overlap 59621 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC A1I_00340 61947 - 59737 - | DNA topoisomerase IV subunit A TERM 44 61262 - 61274 + g 74 -6.3 -4.44915 | GTCATATAGGCACTA GTGAT AAC ATCAC TTTTATCAATAATTA A1I_00345 62348 - 62085 - | hypothetical protein A1I_00350 63083 - 62397 - | hypothetical protein TERM 45 62932 - 62945 + g 74 -3.1 -5.35224 | opp_overlap 62930, overlap 62933 GATGGCATAATATCT TCTAC TTTA GTAGG TTTTATTTTTGTAGG TERM 46 63156 - 63146 - R 88 -4 -5.72254 | opp_overlap 63146, overlap 63139 GCAAATAATAAAAAA TACT AAT AGTA TTTTTAACTGGATCC argS 64975 - 63245 - | arginyl-tRNA synthetase A1I_00360 66136 - 64985 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein A1I_00365 66618 - 66328 - | endonuclease A1I_00370 66832 - 67164 + | Iron-sulfur cluster assembly accessory protein TERM 47 67268 - 67252 - T 90 -6.7 -5.54403 | opp_overlap 67251 67252 AAAAAATAATAAAAA TACTAAT ATT ATTAGTA CTTTTTAGCTGGATT A1I_00375 68755 - 67445 - | hypothetical protein dcd 69050 - 69616 + | deoxycytidine triphosphate deaminase TERM 48 69789 - 69775 - g 73 -7.8 -3.68908 | opp_overlap 69775 69773 69776, overlap 69776 AAATACCGATGCAAA CGAGGC AAT GCCTCA TATTTCTGTTAATGC TERM 49 69776 - 69788 + G 73 -9.1 -2.82253 | opp_overlap 69775 69776, overlap 69775 69773 AATACCGATGCAAAC GAGGC AAT GCCTC ATATTTCTGTTAATG TERM 50 69788 - 69776 - g 73 -9.1 -2.80622 | opp_overlap 69776 69775 69773, overlap 69775 AATACCGATGCAAAC GAGGC AAT GCCTC ATATTTCTGTTAATG A1I_00385 69749 - 70207 + | preprotein translocase subunit SecB A1I_00390 70439 - 71152 + | transcriptional activator protein CzcR queF 71325 - 72146 + | 7-cyano-7-deazaguanine reductase TERM 51 72521 - 72491 - T 72 -6.4 -4.33785 | opp_overlap 72498, overlap 72498 AGATCCAGAAAATAA TAAAAAATACTAAC TTT ATTAGTATTTTTAA CTGGCTCTAGTTCAT TERM 52 72514 - 72498 - T 90 -4.5 -5.77677 | opp_overlap 72498, overlap 72491 GAAAATAATAAAAAA TACTAAC TTT ATTAGTA TTTTTAACTGGCTCT A1I_00400 73141 - 72668 - | F0F1 ATP synthase subunit B A1I_00405 73617 - 73144 - | F0F1 ATP synthase subunit B' A1I_00410 73860 - 73636 - | F0F1 ATP synthase subunit C A1I_00415 74621 - 73893 - | F0F1 ATP synthase subunit A A1I_00420 74889 - 74626 - | hypothetical protein TERM 53 74834 - 74848 + g 70 -7.2 -3.62002 | overlap 74830 GAATTAGGGGTTTTA TCAGTT TTT AACTGA TTAATTCTTGTCTTA A1I_00425 75653 - 74889 - | protein-disulfide isomerase A1I_00430 75840 - 76376 + | transcriptional regulator A1I_00435 76990 - 76730 - | hypothetical protein A1I_00440 77094 - 77522 + | putative P-loop hydrolase A1I_00445 79290 - 77509 - | hypothetical protein TERM 54 78318 - 78330 + g 82 -7.7 -4.59251 | opp_overlap 78315, overlap 78307 78309 78315 GAGATTCAGGAAGCT GAGCT TTC AGCTC TTTAATTTTTTTTAC TERM 55 78419 - 78436 + g 77 -4.2 -5.37043 | opp_overlap 78419 TCTTTTTTCAAATTA GTTTGA GCCATA TCAAAC TTTTTTCTCTGAAGT TERM 56 78473 - 78483 + g 70 -4 -5.12172 | TATTTTTTCAAAGCG GATT CAA AATC TTTTATTTCTTCCTG TERM 57 78674 - 78685 + g 71 -3 -5.1675 | TGTACATCTGAAACC TCAA AAGG TTGA TTTTTTAGTAACTCA TERM 58 79854 - 79867 + r 83 -2.4 -5.84381 | TCATTACAGCGGCTA CTTC ATCGGC GAAG TTTTTTTCTTCCTGC tsf 80760 - 79831 - | elongation factor Ts rpsB 81678 - 80803 - | 30S ribosomal protein S2 TERM 59 80917 - 80929 + g 72 -4.9 -4.84761 | TAATTTAGAAACATT TTTAG GAG CTAAA TTTTTATCACCATGT cysS 83330 - 81954 - | cysteinyl-tRNA synthetase TERM 60 83019 - 83036 + g 72 -5.7 -4.35693 | opp_overlap 83015 83019, overlap 83015 TAAACAAAATAGATA TTTCATA TTCG TATGAAA TTCTTTTGTAACTTT TERM 61 83633 - 83623 - g 79 -6.8 -4.57581 | overlap 83626 ACTTTAAATAATAAA GCAG AAG CTGC ACCACCTCCACCACC A1I_00465 83506 - 86214 + | cell surface antigen Sca2 TERM 62 86222 - 86256 + F 86 -9.7 -3.85909 | gap 1, opp_overlap 86222 ATTTGTAGAACAAAA TAGATAAAGAG-ATAA GGCT TTATTCTCTTTATCTA TTTGAATTTAAGTAA TERM 63 86256 - 86222 - f 100 -9.7 -4.77567 | gap 1, opp_overlap 86222 ATTTGTAGAACAAAA TAGATAAAGAG-ATAA GGCT TTATTCTCTTTATCTA TTTGAATTTAAGTAA rpmB 86362 - 86655 + | 50S ribosomal protein L28 A1I_00475 86652 - 86891 + | 50S ribosomal protein L31 TERM 64 87061 - 87025 - f 100 -11.3 -4.4715 | opp_overlap 87028 87035, overlap 87028 87035 TGGCAATCCAGAAAA TAATTAAAAATACTAAT TTT ATTAGTATTTTTAATTG GATCCCCTGAATAAA TERM 65 87058 - 87028 - f 100 -13 -4.34789 | opp_overlap 87028 87035, overlap 87025 87035 CAATCCAGAAAATAA TTAAAAATACTAAT TTT ATTAGTATTTTTAA TTGGATCCCCTGAAT TERM 66 87028 - 87058 + F 100 -13 -3.06915 | opp_overlap 87028 87025 87035, overlap 87035 CAATCCAGAAAATAA TTAAAAATACTAAT TTT ATTAGTATTTTTAA TTGGATCCCCTGAAT TERM 67 87051 - 87035 - f 83 -6.7 -5.07971 | opp_overlap 87028 87035, overlap 87028 87025 GAAAATAATTAAAAA TACTAAT TTT ATTAGTA TTTTTAATTGGATCC TERM 68 87035 - 87051 + F 82 -6.7 -4.88407 | opp_overlap 87035 87028 87025, overlap 87028 GAAAATAATTAAAAA TACTAAT TTT ATTAGTA TTTTTAATTGGATCC TERM 69 87422 - 87389 - f 82 -6.4 -5.31456 | gap 1, opp_overlap 87389 87392 87399, overlap 87392 87399 GCAATCTAGAAAAAA TAATAAAAAATGCTA TAAAT TAGCATTTTTTA-TA CTTCCTTGCTTCGTC TERM 70 87392 - 87420 + F 78 -10.6 -2.87354 | opp_overlap 87389 87392 87399, overlap 87389 87399 ATCTAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTGCTTCG TERM 71 87420 - 87392 - f 100 -10.6 -4.73105 | opp_overlap 87392 87389 87399, overlap 87389 87399 ATCTAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTGCTTCG TERM 72 87399 - 87413 + F 78 -4.3 -5.38249 | opp_overlap 87392 87389 87399, overlap 87392 87389 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT TERM 73 87413 - 87399 - f 88 -4.3 -5.80727 | opp_overlap 87399 87392 87389, overlap 87392 87389 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT A1I_00480 87539 - 88177 + | GTPase EngB TERM 74 88384 - 88360 - gf 72 -6.6 -4.07568 | opp_overlap 88360 88354 88381, overlap 88381 TGTGCGGTGCTAAAA TCTATATAGT ACATG ACCATATAGA TTTAGGTAATCTATC A1I_00485 88125 - 89057 + | acetylglutamate kinase A1I_00490 89113 - 89400 + | VirB3 A1I_00495 89867 - 89502 - | transposase A1I_00500 89878 - 90783 + | hypothetical protein TERM 75 91173 - 91196 + GT 78 -9 -3.37796 | opp_overlap 91172 91173 GCTTAGCTCTAAAAG CTTTCACTTT TTTA AAAGTGAGAG TTATAGATGATAAAG TERM 76 91853 - 91841 - gT 76 -3.4 -5.45813 | TACGAAAAAACAAAA CTTC CTACC GAAG CATCCCTTTTATCTT A1I_00505 90752 - 92818 + | hypothetical protein A1I_00510 93777 - 92869 - | transposase TERM 77 93599 - 93609 + g 74 -4 -5.19916 | opp_overlap 93599 GCAGAGAATAAAATA TCTA CTA TAGA TTTTTTGAGTCTTTT A1I_00515 94206 - 93991 - | alanyl-tRNA synthetase A1I_00520 95998 - 94298 - | hypothetical protein TERM 78 95196 - 95227 + g 72 -4.7 -4.87389 | opp_overlap 95198 95203, overlap 95198 95203 AATATAAGAGGAATT AATAAAACATATT TAATAT AATATGTTTTATA TTTATTTTTAGCCTG TERM 79 95198 - 95225 + g 74 -7.3 -4.04587 | opp_overlap 95198 95203, overlap 95196 95203 TATAAGAGGAATTAA TAAAACATATT TAATAT AATATGTTTTA TATTTATTTTTAGCC A1I_00535 98755 - 100266 + | hypothetical protein TERM 80 100276 - 100262 - f 79 -5.8 -5.1675 | overlap 100271 TCATTGACGAAAAAA CTTAAA TTA TTTAAG GTAAAGAGATGTTTC A1I_00540 100285 - 100920 + | hypothetical protein A1I_00545 100917 - 101843 + | hypothetical protein A1I_00560 103510 - 104757 + | proline/betaine transporter A1I_00565 104992 - 105912 + | transposase A1I_00570 105961 - 106590 + | hypothetical protein A1I_00575 106623 - 107531 + | nucleotidyltransferase TERM 81 107607 - 107571 - T 100 -19.1 -4.45485 | opp_overlap 107581 107583 ACTAGATCCAGAAAA CAGCTAGAAACATCAAT ATT ATTGATATTTCTAGCTG AATCCCATGAATAAA A1I_00580 107951 - 107646 - | hypothetical protein A1I_00585 108395 - 108072 - | hypothetical protein truA 109188 - 108451 - | tRNA pseudouridine synthase A A1I_00595 109744 - 109265 - | hypothetical protein A1I_00600 110381 - 109830 - | Type I restriction-modification system methyltransferase subunit A1I_00605 111808 - 110366 - | Type I restriction-modification system methyltransferase subunit TERM 82 111082 - 111106 + g 83 -10.9 -2.81966 | opp_overlap 111089, overlap 111089 TTTTATCACTCCCTT CCGGAAATAAA TCT TTTATTTTCGG TCTAATAACATTTGC TERM 83 111861 - 111891 + r 100 -9.3 -4.5448 | opp_overlap 111857 111868, overlap 111862 111868 TTCCACCAAAAGCTG TTAAAAATATCAG CAATA CTGATATTTTTAG TTATTTTTCTGGATA TERM 84 111862 - 111890 + r 83 -10.6 -3.31603 | opp_overlap 111857 111868, overlap 111861 111868 TCCACCAAAAGCTGT TAAAAATATCAG CAATA CTGATATTTTTA GTTATTTTTCTGGAT TERM 85 111884 - 111868 - R 73 -5.9 -4.61527 | opp_overlap 111868 111862 111861, overlap 111857 AAAAGCTGTTAAAAA TATCAGC AAT ACTGATA TTTTTAGTTATTTTT TERM 86 111868 - 111884 + r 76 -5.2 -5.10004 | opp_overlap 111857 111868, overlap 111862 111861 AAAAGCTGTTAAAAA TATCAG CAATA CTGATA TTTTTAGTTATTTTT A1I_00610 112184 - 111939 - | RNA polymerase sigma factor RpoD A1I_00615 112335 - 112225 - | RNA polymerase sigma factor A1I_00620 113866 - 112322 - | RNA polymerase sigma factor RpoD dnaG 115748 - 113949 - | DNA primase TERM 87 114010 - 114026 + g 72 -3.7 -5.24129 | overlap 114025 TCTTGTAATTCACTT GCAATCT TTA AGATTTC TTTTTTATAAAACAA TERM 88 115610 - 115584 - G 90 -3.8 -6.04419 | overlap 115576 AAAACAATAAAAAAA TCTTTTACTATC ACT AACTGTAAAAGA TGGGGTTTTCTCTTG A1I_00630 116366 - 115752 - | dolichol kinase greA 116469 - 116954 + | transcription elongation factor GreA lipB 116976 - 117605 + | lipoyltransferase TERM 89 117879 - 117865 - g 74 -8.6 -3.224 | overlap 117863 TAACGTTCTAGAACA GCAAGT AAT ACTTGC TCCAAATCAAATAAT A1I_00645 117602 - 118126 + | hypothetical protein TERM 90 119240 - 119230 - T 70 -4 -4.92783 | AAGCGATTATAAAAA TAAC GAA GTTA CCTAAAGAAGAGATT A1I_00660 119650 - 119327 - | hypothetical protein A1I_00665 121188 - 119662 - | DNA polymerase III subunits gamma and tau A1I_00670 122069 - 121425 - | Outer membrane lipoprotein-sorting protein LolA A1I_00675 122138 - 123262 + | NAD(P) transhydrogenase subunit alpha A1I_00680 123421 - 123822 + | NAD(P) transhydrogenase subunit alpha A1I_00685 125022 - 123829 - | hypothetical protein TERM 91 124617 - 124605 - G 76 -6.3 -4.7254 | ATTCTTGATGAAAAA TATGG GGA CCATA AGGTATATATACTAT TERM 92 124979 - 124965 - G 72 -7.2 -3.91882 | opp_overlap 124965 124964 GTACTATAAACATAA CTTCTT TAG AAGAAG GATTTTTTGCAAATG A1I_00690 126307 - 125054 - | proline/betaine transporter TERM 93 125951 - 125939 - G 70 -6.3 -4.16842 | CTCACCTGCAATAAA TATGC CTT GCATA AAACGGCATAAAACA A1I_00695 126947 - 126630 - | hypothetical protein A1I_00700 127153 - 126950 - | hypothetical protein A1I_00705 127513 - 127157 - | hypothetical protein A1I_00710 132267 - 127516 - | NAD-specific glutamate dehydrogenase TERM 94 129389 - 129411 + g 80 -10.6 -2.77132 | opp_overlap 129386, overlap 129392 129394 TCACCTGACATATCG CCTATCCCTG TCA CAGTGATAGG GTCTTTCTGTACATC TERM 95 129394 - 129412 + g 82 -9.6 -3.63092 | opp_overlap 129386, overlap 129389 129392 TGACATATCGCCTAT CCCTGTCA CAG TGATAGGG TCTTTCTGTACATCT TERM 96 131135 - 131118 - G 82 -8.5 -4.03078 | overlap 131123 TCATCATACTAGAAA GCATATG CAAA CATATGC AATATAAATCACCTT TERM 97 131997 - 132023 + g 80 -6 -4.98522 | overlap 131999 TTATTGCTGGATCGT TTTCAATAACAG TAT TTGTTATTGATA TTTTTCTCTCGCCTT TERM 98 131999 - 132021 + g 82 -8.6 -4.11141 | overlap 131997 ATTGCTGGATCGTTT TCAATAACAG TAT TTGTTATTGA TATTTTTCTCTCGCC TERM 99 132476 - 132460 - H 75 -4.5 -5.08824 | opp_overlap 132453 132460 132462, overlap 132462 GGTCCAGCTAAAAAA CACTAAT TTT ATTAGTA TTATTTATTATTTTC TERM 100 132587 - 132606 + H 75 -9.4 -3.01924 | opp_overlap 132578 132576 132587 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 101 132606 - 132587 - H 76 -9.4 -3.06087 | opp_overlap 132587, overlap 132578 132576 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_00715 132764 - 132952 + | transposase A1I_00725 134162 - 133326 - | hypothetical protein A1I_00720 133186 - 133440 + | transposase A1I_00730 135627 - 134188 - | NACHT family NTPase TERM 102 136087 - 136075 - g 93 -6.3 -5.53436 | opp_overlap 136082, overlap 136082 ATATAATAGAAAAAA GAATC AAT GATTC AGTAAATCATGTTAT tig 135867 - 137204 + | trigger factor A1I_00740 137373 - 137618 + | putative antitoxin of toxin-antitoxin (TA) system A1I_00745 137615 - 137968 + | toxin of toxin-antitoxin (TA) system VapC glyQ 138055 - 138924 + | glycyl-tRNA synthetase subunit alpha glyS 138917 - 140893 + | glycyl-tRNA synthetase subunit beta TERM 103 141174 - 141162 - g 82 -6.3 -5.07652 | TCCGTTAAAAGAAAA TGCAA ATG TTGCA ACGGCAGTTACGGCA A1I_00760 140890 - 141828 + | putative translation factor protein A1I_00765 142206 - 141829 - | hypothetical protein A1I_00770 142243 - 143160 + | ribosomal protein L11 methylase TERM 104 143321 - 143331 + G 71 -6.8 -4.14615 | opp_overlap 143310 AAAACAAAAAGTTTT TGCC AAT GGCA TTTATGATGTTTTGT A1I_00775 143236 - 144732 + | ATP/ADP translocase A1I_00780 144795 - 146084 + | sugar phosphate permease ndk 146113 - 146535 + | nucleoside diphosphate kinase A1I_00790 146539 - 148404 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 148385 - 148963 + | glucose-inhibited division protein B TERM 105 149090 - 149076 - g 72 -8.6 -3.13073 | overlap 149074 AGTTTTAGTAATAGA CCTTGA CCC TCAAGG TAATAGTAGTACTGG A1I_00800 148960 - 149733 + | ATPase TERM 106 150037 - 150025 - g 82 -4.9 -5.37345 | overlap 150018 GGTAATTATAAAAAA TTTAG ATG CTAAA GAGAGTATGGAAATA TERM 107 150460 - 150442 - g 73 -7.6 -3.68724 | opp_overlap 150445, overlap 150445 AGAAAAAACAGAAGA TAATGATT TAC AATCATTA GTAAAAATTTTATCA A1I_00805 149723 - 150586 + | ParB-like partition proteins TERM 108 151949 - 151932 - g 76 -7.1 -4.30844 | AGGTGATCAGCAAAA GAAAGTT GGAC AACTTTC TGGAGGGGAGCGTAA A1I_00810 150607 - 152274 + | putative ABC transporter ATP-binding protein A1I_00815 152277 - 152552 + | hypothetical protein secG 152654 - 152956 + | preprotein translocase subunit SecG A1I_00825 152973 - 153797 + | 2-dehydro-3-deoxyphosphooctonate aldolase A1I_00830 153800 - 154132 + | EMAP domain-containing protein A1I_00835 154129 - 154740 + | hypothetical protein A1I_00840 155003 - 154755 - | hypothetical protein A1I_00845 155760 - 155005 - | ribonucleotide ABC transporter ATP-binding protein A1I_00850 156546 - 155767 - | ABC transporter permease protein TERM 109 156704 - 156674 - R 83 -8.6 -4.09117 | opp_overlap 156681, overlap 156681 GGCATCCAGAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 110 156697 - 156681 - R 95 -6.7 -5.74288 | opp_overlap 156681, overlap 156674 AGAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 111 156681 - 156697 + r 78 -6.7 -4.67353 | opp_overlap 156681 156674 AGAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC alr 158037 - 156805 - | alanine racemase A1I_00860 158905 - 158060 - | ribose-phosphate pyrophosphokinase TERM 112 158996 - 158953 - R 79 -9.2 -3.52113 | opp_overlap 158953 158973, overlap 158951 158954 158973 ATTCGGTTAGAAATA TTGAATATAAAAGACGAAAA GCGG TTTCCACCTTTTATATTCAG ATTTTAAATAAATAG TERM 113 158995 - 158954 - R 100 -12.7 -2.70946 | opp_overlap 158953 158973, overlap 158953 158951 158973 TTCGGTTAGAAATAT TGAATATAAAAGACGAAAA GCGG TTTCCACCTTTTATATTCA GATTTTAAATAAATA A1I_00865 160031 - 159021 - | hypothetical protein TERM 114 159931 - 159952 + g 80 -5.9 -4.95618 | TCTCCATCATTACTA GAAGAATTG CCGC CATTTCTTC TTTGTTTTTCATATT TERM 115 160076 - 160058 - R 72 -6.1 -4.208 | overlap 160054 CTTTAAAATGATAAA TTACTTG TAATT CAAGTAA GGCTATTTAATCATT A1I_00870 161399 - 160143 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 116 160537 - 160559 + g 71 -7.8 -3.47345 | GGTAAGTCATTCTGT GATTTAGCAG TAG CTGATAAATC TTGTGCTATGCAGTT A1I_00875 162052 - 161396 - | hypothetical protein TERM 117 162124 - 162087 - R 70 -8.5 -3.17075 | gap 1 TCCCGTGCAAGTGAA TTGGTGTCATCCCGTGGC TTG ACCACGGGATC-CAGCAA TATAAAATACAAATA A1I_00880 163413 - 162214 - | aspartate aminotransferase A1I_00885 163619 - 163476 - | hypothetical protein TERM 118 164068 - 164031 - g 79 -6.7 -4.59653 | gap 1, opp_overlap 164025 164045 164046, overlap 164035 AATGAAAAATATAAA GCAATTTTTATAAATTTT TTG AAAAATTATAAAAA-TGC TACCGAAATACCTGT TERM 119 164065 - 164035 - g 70 -7.2 -3.76387 | opp_overlap 164025 164045 164046, overlap 164031 AAAAATATAAAGCAA TTTTTATAAATTTT TTG AAAAATTATAAAAA TGCTACCGAAATACC A1I_00890 163698 - 164711 + | hypothetical protein A1I_00895 164708 - 165475 + | VacJ lipoprotein precursor A1I_00900 165487 - 166071 + | ABC-type transporter A1I_00905 166328 - 166164 - | transposase A1I_00910 167121 - 166315 - | transposase TERM 120 167282 - 167301 + r 76 -9.4 -3.06087 | opp_overlap 167282, overlap 167274 167270 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 121 167301 - 167282 - R 75 -9.4 -3.01924 | opp_overlap 167282 167274 167270 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 122 167402 - 167438 + r 86 -9.1 -3.87815 | opp_overlap 167402, overlap 167405 167412 167414 ACTAGATCCAGAAAA TAATAAATAATACTAAT AAA ATTAGTGTTTTTTATTA TTTATAGAAATAACA TERM 123 167438 - 167402 - R 76 -6.9 -4.45485 | opp_overlap 167402 167405 167412 167414 ACTAGATCCAGAAAA TAATAAATAATACTAAT AAA ATTAGTGTTTTTTATTA TTTATAGAAATAACA TERM 124 167405 - 167435 + r 70 -6.4 -4.07133 | opp_overlap 167402, overlap 167402 167412 167414 AGATCCAGAAAATAA TAAATAATACTAAT AAA ATTAGTGTTTTTTA TTATTTATAGAAATA TERM 125 167412 - 167428 + r 90 -4.5 -5.74288 | opp_overlap 167402, overlap 167405 167402 167414 GAAAATAATAAATAA TACTAAT AAA ATTAGTG TTTTTTATTATTTAT A1I_00915 169187 - 167496 - | bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase A1I_00920 169609 - 169190 - | toxin of toxin-antitoxin (TA) system TERM 126 169318 - 169338 + g 73 -9.1 -2.90219 | overlap 169321 AGGTTAAGTTGTGTT CAGTAGCTA GTC TAGCTATTG TATATAAAGATTCTG TERM 127 169321 - 169335 + g 70 -7.2 -3.5947 | overlap 169318 TTAAGTTGTGTTCAG TAGCTA GTC TAGCTA TTGTATATAAAGATT A1I_00925 169848 - 169606 - | antitoxin of toxin-antitoxin (TA) system Phd A1I_00930 170851 - 169913 - | ribosomal large subunit pseudouridine synthase RluD subfamily protein A1I_00935 170866 - 171657 + | Uracil-DNA glycosylase A1I_00940 172536 - 171775 - | transposase A1I_00945 172730 - 172542 - | transposase TERM 128 172907 - 172888 - H 75 -9.4 -3.01924 | opp_overlap 172880 172876 172888 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 129 172888 - 172907 + H 76 -9.4 -3.06087 | opp_overlap 172888, overlap 172880 172876 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT A1I_00950 173161 - 175578 + | VirB4 TERM 130 175697 - 175669 - f 70 -5.6 -4.28115 | gap 1, opp_overlap 175677, overlap 175677 ATCCAGAAGAAATAA TAAAAAAATGCTA AAAT TAGCATT-TTTTA CTGGATTGCTTCGTC TERM 131 175690 - 175677 - f 93 -5.3 -6.01369 | opp_overlap 175677, overlap 175669 GAAATAATAAAAAAA TGCTA AAAT TAGCA TTTTTTACTGGATTG TERM 132 175677 - 175690 + F 79 -5.3 -5.18357 | opp_overlap 175677 175669 GAAATAATAAAAAAA TGCTA AAAT TAGCA TTTTTTACTGGATTG TERM 133 175913 - 175899 - g 74 -8.6 -3.27164 | CACTACAGAATTTAA CTTGTG AAA CACAAG GAGTCGGTGACTTAT A1I_00955 175772 - 178891 + | VirB6 A1I_00960 178878 - 180902 + | VirB6 A1I_00965 180909 - 183776 + | VirB6 TERM 134 184497 - 184513 + F 70 -6.5 -4.10164 | opp_overlap 184492 184499 GTTTGTAATATTATA GATGCTC AAA GAGCAAC TTTATGTACTGGTAC TERM 135 184780 - 184748 - f 77 -8.7 -3.61894 | AAGCTTTGTTAATAA TGATAATACACAGAA TGG TTTTATGTATTATCA AGCAACTAGCGGTGG TERM 136 188732 - 188717 - g 84 -6.2 -5.13343 | GAAGTTAAAAGAAAA TATGGT ATAG ACCATA AAGACGTTAATATGC A1I_00980 186614 - 190087 + | VirB6 TERM 137 190092 - 190110 + T 76 -6.6 -4.39998 | opp_overlap 190092 190093, overlap 190093 ATATGAAGTAAAAAA TCCGTCAC CCC GTGGCGGC TTTGTTATGTGGATC TERM 138 190110 - 190092 - T 75 -4.4 -5.31059 | opp_overlap 190092 190093, overlap 190093 ATATGAAGTAAAAAA TCCGTCAC CCC GTGGCGGC TTTGTTATGTGGATC TERM 139 190093 - 190109 + T 80 -10.1 -3.23276 | opp_overlap 190092 190093, overlap 190092 TATGAAGTAAAAAAT CCGTCAC CCC GTGGCGG CTTTGTTATGTGGAT TERM 140 190109 - 190093 - T 74 -7.9 -3.77008 | opp_overlap 190093 190092, overlap 190092 TATGAAGTAAAAAAT CCGTCAC CCC GTGGCGG CTTTGTTATGTGGAT TERM 141 190166 - 190196 + T 84 -8.6 -4.33785 | opp_overlap 190173, overlap 190173 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 142 190173 - 190189 + T 95 -6.7 -5.77677 | opp_overlap 190173, overlap 190166 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 143 190189 - 190173 - T 78 -6.7 -4.67353 | opp_overlap 190173 190166 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 144 190235 - 190250 + T 74 -7.6 -3.84674 | opp_overlap 190235 AGCCACGGGATGACA CCGAAA GCGT TTTCGG TTCTTGTCATCCCAT A1I_00985 191343 - 190318 - | O-sialoglycoprotein endopeptidase A1I_00990 191657 - 191340 - | hypothetical protein tgt 192726 - 191641 - | queuine tRNA-ribosyltransferase TERM 145 192947 - 192975 + r 100 -10.6 -4.4831 | opp_overlap 192954, overlap 192954 TTCACGGGATCCAGC TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTCCTAGAT TERM 146 192968 - 192954 - R 72 -4.3 -5.09895 | opp_overlap 192954 192947 GATCCAGCTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 147 192954 - 192968 + r 88 -4.3 -5.80727 | opp_overlap 192954, overlap 192947 GATCCAGCTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT A1I_01000 193069 - 192956 - | hypothetical protein A1I_01005 193678 - 193118 - | hypothetical protein lnt 195227 - 193728 - | apolipoprotein N-acyltransferase TERM 148 195351 - 195388 + H 93 -8.9 -4.89852 | gap 1, opp_overlap 195362, overlap 195362 CTTGACCACGGGGTC CAGCTAAAAAATACTAAT AAT ATTAGTATTTTTTA-TTG TTTTTCTGGATCTAG TERM 149 195362 - 195378 + H 95 -6.7 -5.80727 | opp_overlap 195362, overlap 195351 GGTCCAGCTAAAAAA TACTAAT AAT ATTAGTA TTTTTTATTGTTTTT TERM 150 195378 - 195362 - H 83 -6.7 -5.08824 | opp_overlap 195362 195351 GGTCCAGCTAAAAAA TACTAAT AAT ATTAGTA TTTTTTATTGTTTTT A1I_01015 195490 - 196278 + | enoyl-(acyl carrier protein) reductase A1I_01020 199563 - 196594 - | hypothetical protein TERM 151 199205 - 199218 + g 71 -5.3 -4.61916 | GAATTACTGCTTTTT TTAGC GTTT GCTAA TTCTTTATTTTTTAT TERM 152 199432 - 199453 + g 83 -6.7 -4.92239 | opp_overlap 199432 199444, overlap 199434 199445 TAAATTAGAATTATA TGTTTTAGC ATAT GCTAAAATA TTTTTAGCTTTTTCC TERM 153 199434 - 199451 + g 74 -7.1 -4.05905 | opp_overlap 199432 199444, overlap 199432 199445 AATTAGAATTATATG TTTTAGC ATAT GCTAAAA TATTTTTAGCTTTTT TERM 154 199445 - 199461 + g 85 -8.1 -4.66833 | opp_overlap 199432 199444, overlap 199434 199432 TATGTTTTAGCATAT GCTAAAA TAT TTTTAGC TTTTTCCGGTTCAAA TERM 155 199746 - 199781 + r 79 -5.1 -5.31456 | gap 1, opp_overlap 199757, overlap 199750 199757 AATTACGAAGTAATT TAGTTAAAAAATGCTA ATTTA TAGCATTTTTT-ATTA TTTTTTCTGGATTGC TERM 156 199750 - 199778 + r 100 -10.6 -4.73105 | opp_overlap 199757, overlap 199746 199757 ACGAAGTAATTTAGT TAAAAAATGCTA ATTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 157 199757 - 199771 + r 88 -4.3 -5.80727 | opp_overlap 199757, overlap 199750 199746 AATTTAGTTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 158 199771 - 199757 - R 72 -4.3 -5.10497 | opp_overlap 199757 199750 199746 AATTTAGTTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 159 199886 - 199903 + r 76 -9.9 -2.85351 | GTGATTCCGATGTCA TTCCTGC GAAA GCAGGAA TCTAGTATAAAGCGA TERM 160 200175 - 200151 - R 79 -7.3 -4.47456 | ACATGGAATAAGAAA GAAAAAACTAC TCT ATAGCTTTTTC GATATTAACTATTAT A1I_01025 201840 - 200158 - | putative hydrolase TERM 161 200387 - 200406 + g 70 -4.3 -4.7497 | gap 1, opp_overlap 200386 GGCATAGATAATATC GGCTTTGC GGCAA GCAA-GCC TTTTTGATCAATCAC TERM 162 201456 - 201434 - G 80 -7.1 -4.66163 | opp_overlap 201434 201432 ATTTCCAGCGAAAAA GGAGATAAA TCTAT TTTACCTCC TGGTTTTACTTCATG TERM 163 202048 - 202038 - H 72 -4 -5.04249 | TCTTTAAAAAAGAAA TTCA CAA TGAA TATGAATAAAATAGC ppnK 202044 - 202811 + | inorganic polyphosphate/ATP-NAD kinase TERM 164 202922 - 202910 - T 75 -4.9 -5.07652 | CTTGTTAAAATAAAA TTCAA TTC TTGAA ATACAAGCAGTATAT TERM 165 203101 - 203131 + T 84 -8.6 -4.33785 | opp_overlap 203108, overlap 203108 ATGAACTAGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 166 203108 - 203124 + T 95 -6.7 -5.77677 | opp_overlap 203108, overlap 203101 AGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 167 203124 - 203108 - T 78 -6.7 -4.67755 | opp_overlap 203108 203101 AGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_01045 204499 - 204386 - | hypothetical protein A1I_01050 204588 - 204680 + | hypothetical protein TERM 168 204967 - 204951 - g 70 -4.5 -4.92239 | opp_overlap 204951 204954 TGAAAAACTTAAAAA CCATAAA TTG TTTATAG ATTATGAAATTAGTG TERM 169 205100 - 205076 - g 71 -5.2 -4.73682 | opp_overlap 205092, overlap 205071 205086 GCTTACAAGATAAAA TTTTTAACAA CTTTC TTGCTAAAAA AAGCAGTTTTTATTT A1I_01055 204784 - 206685 + | hypothetical protein recR 207289 - 206687 - | recombination protein RecR A1I_01065 207811 - 207317 - | RDD family protein TERM 170 207516 - 207504 - G 80 -6.3 -4.90906 | TTATAATACCAAAAA CCTAT AAA ATAGG AACCTATCACTGTTA A1I_01070 207870 - 208295 + | hypothetical protein rbfA 208302 - 208673 + | ribosome-binding factor A TERM 171 208787 - 208748 - f 85 -11 -3.10636 | opp_overlap 208761, overlap 208746 208742 208761 TGAAAACAATAATTA TCCATTGTACTAAGTATT TAAA AATACTTAGTACAACAGT CCCCTAGGTCCCCTA TERM 172 208882 - 208893 + F 74 -3 -5.45726 | TCAAGTGCTTTTAGT TACT TTTT AGTA TTTTTTTAAACTATA TERM 173 208934 - 208956 + F 71 -5.8 -4.52042 | TACTATTTCTTAATG TTTTTATATT TCC AGTATAAAAA TTTATTAATTTTTAT A1I_01080 209059 - 209694 + | hypothetical protein TERM 174 210793 - 210777 - g 70 -8.1 -3.15742 | overlap 210776 GCAGTATCAATAAAT TACGATA TGG TATCGTA CAAAATATTAGATAA A1I_01085 209892 - 211928 + | acylamino-acid-releasing protein TERM 175 211956 - 212002 + F 87 -11.1 -3.4252 | gap 2, overlap 211957 211958 GGAGATGCGTAGCAT CGA-CGTGGCAATCTCA-GGAGT CCT GCTTCATGAGATTGCCACGCTCC TTGTAGTCGCTCGCA TERM 176 211957 - 212001 + F 100 -14.6 -2.65298 | gap 2, overlap 211956 211958 GAGATGCGTAGCATC GA-CGTGGCAATCTCA-GGAGT CCT GCTTCATGAGATTGCCACGCTC CTTGTAGTCGCTCGC TERM 177 211958 - 211999 + F 100 -13.9 -2.86747 | gap 1, overlap 211957 211956 AGATGCGTAGCATCG ACGTGGCAATCTCA-GGAGT CCT GCTTCATGAGATTGCCACGC TCCTTGTAGTCGCTC A1I_01090 212058 - 212261 + | hypothetical protein A1I_01095 212676 - 212930 + | transcriptional regulator A1I_01100 212917 - 213306 + | putative nucleic-acid-binding protein sucC 213348 - 214505 + | succinyl-CoA synthetase subunit beta A1I_01110 214719 - 215594 + | succinyl-CoA synthetase subunit alpha A1I_01115 216795 - 215836 - | transposase TERM 178 216975 - 216956 - H 75 -9.4 -3.01924 | opp_overlap 216948 216944 216956 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 179 216956 - 216975 + H 76 -9.4 -3.06087 | opp_overlap 216956, overlap 216948 216944 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 180 217046 - 217058 + H 76 -9.1 -3.18912 | opp_overlap 217046 TTTCTTTTCTTACAA TGCCG TGG CGGCA TTGGTGCGTGGATCG TERM 181 217058 - 217046 - H 78 -9.1 -3.28712 | opp_overlap 217046 TTTCTTTTCTTACAA TGCCG TGG CGGCA TTGGTGCGTGGATCG TERM 182 217119 - 217149 + H 84 -8.6 -4.33182 | opp_overlap 217126, overlap 217126 GACCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 183 217142 - 217126 - H 78 -6.7 -4.67353 | opp_overlap 217119 217126 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 184 217126 - 217142 + H 95 -6.7 -5.77677 | opp_overlap 217126, overlap 217119 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_01120 217503 - 218555 + | phosphate acetyltransferase A1I_01125 218557 - 219576 + | acetate kinase A1I_01130 219800 - 220048 + | transcriptional regulator A1I_01135 220041 - 220427 + | hypothetical protein A1I_01140 220432 - 220968 + | ankyrin repeat-containing protein TERM 185 221614 - 221593 - g 77 -4.5 -5.30686 | AATATGTAGAAAAAA TCGATAATT TAAA AATAATCGA TGATAAGCTATATGA A1I_01145 220968 - 222416 + | hypothetical protein trmD 222462 - 223268 + | tRNA (guanine-N(1)-)-methyltransferase rplS 223272 - 223700 + | 50S ribosomal protein L19 TERM 186 223945 - 223959 + T 85 -2.9 -5.83226 | opp_overlap 223933 223945, overlap 223933 TAATCTAGTAAAAAA TACTA CAAAT TAGTA TTTTTTTATTAGATT A1I_01160 224585 - 223968 - | hypothetical protein A1I_01165 224989 - 224612 - | ankyrin repeat-containing protein TERM 187 225192 - 225229 + r 70 -5.9 -4.30477 | gap 1, opp_overlap 225193, overlap 225193 225208 TATGCGTTAAATATA AGTAATCAAG-AATTTTG CAA TAAAATTGCTTGATTACC TTTGTCTGTTCTTTG TERM 188 225228 - 225193 - R 80 -8.7 -3.81755 | gap 1, opp_overlap 225192 225193 225208 ATGCGTTAAATATAA GTAATCAAG-AATTTT GCAAT AAAATTGCTTGATTAC CTTTGTCTGTTCTTT TERM 189 225193 - 225228 + r 76 -9.4 -3.16659 | gap 1, opp_overlap 225193, overlap 225192 225208 ATGCGTTAAATATAA GTAATCAAG-AATTTTG CAA TAAAATTGCTTGATTAC CTTTGTCTGTTCTTT A1I_01170 226154 - 225225 - | hypothetical protein A1I_01175 226620 - 226279 - | hypothetical protein TERM 190 226525 - 226563 + g 95 -10.6 -4.42386 | opp_overlap 226534, overlap 226526 226529 GCTTGTCCACGGGAT CCAGTTAAAGATATCAAT ATT ATTGATATCTTTAGTTGC TTTTCTGGATCCCGC TERM 191 226526 - 226562 + g 100 -14.1 -3.2511 | opp_overlap 226534, overlap 226525 226529 CTTGTCCACGGGATC CAGTTAAAGATATCAAT ATT ATTGATATCTTTAGTTG CTTTTCTGGATCCCG TERM 192 226529 - 226559 + g 95 -12.2 -3.76186 | opp_overlap 226534, overlap 226526 226525 GTCCACGGGATCCAG TTAAAGATATCAAT ATT ATTGATATCTTTAG TTGCTTTTCTGGATC TERM 193 226554 - 226534 - G 86 -9.9 -3.6682 | opp_overlap 226529 226526 226525 CGGGATCCAGTTAAA GATATCAAT ATT ATTGATATC TTTAGTTGCTTTTCT A1I_01180 228472 - 226688 - | penicillin-binding protein TERM 194 226897 - 226911 + gr 71 -8.6 -2.78032 | opp_overlap 226908 226909, overlap 226896 226894 226908 CATTTGCTTTTCCTT GCACTT GAG AAGTGC CTGTTTTACCGGCAA TERM 195 227249 - 227234 - GR 74 -9 -3.16564 | CTTTGATGGTACGAA CCCTGA ACTT TCAGGG GCTAAATCAATACCG A1I_01185 228983 - 228447 - | hypothetical protein TERM 196 228844 - 228859 + g 71 -5.4 -4.58685 | AATATGATTTCTATT GCAGGA AAAA TTCTGC TTTTTACCCCAATTT TERM 197 229248 - 229218 - R 84 -8.6 -4.33182 | opp_overlap 229225, overlap 229225 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGGTC TERM 198 229225 - 229241 + r 78 -6.7 -4.67353 | opp_overlap 229225 229218 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 199 229241 - 229225 - R 95 -6.7 -5.77677 | opp_overlap 229225, overlap 229218 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC gpsA 230297 - 229353 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 200 230244 - 230223 - G 77 -10.1 -2.72043 | opp_overlap 230217 230222 230223, overlap 230222 AACGTTCTCGCAAAC CCTTGCTGC TATG GCTGCAAGG CTTGTGCCGAAACTC TERM 201 230223 - 230244 + g 77 -10.1 -2.57344 | opp_overlap 230223 230222, overlap 230217 230222 AACGTTCTCGCAAAC CCTTGCTGC TATG GCTGCAAGG CTTGTGCCGAAACTC TERM 202 230408 - 230430 + H 72 -5 -4.72617 | opp_overlap 230411, overlap 230411 ACTAGAGCCAGTTAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 203 230411 - 230427 + H 76 -6.7 -4.42118 | opp_overlap 230411, overlap 230408 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 204 230427 - 230411 - H 78 -6.7 -4.67755 | opp_overlap 230411 230408 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 205 230557 - 230538 - H 76 -9.4 -3.06087 | opp_overlap 230538, overlap 230529 230527 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 206 230538 - 230557 + H 75 -9.4 -3.01924 | opp_overlap 230538 230529 230527 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_01195 230715 - 230903 + | transposase A1I_01200 230909 - 231670 + | transposase A1I_01205 233836 - 231689 - | hypothetical protein TERM 207 232768 - 232780 + g 80 -6.3 -4.8048 | overlap 232766 TCAAACTAGTATTTT GTTTG TGA CAAAC TTTTTCCTCTACAAA TERM 208 234034 - 234024 - R 70 -8.2 -3.14998 | overlap 234023 GATCTACGAATAAAG CCCG CCA CGGG ATGACACAGAGGGTG TERM 209 234184 - 234217 + r 100 -12.7 -3.27704 | opp_overlap 234189, overlap 234189 234215 CACTGAGTATATAAA AAAAAGAGTCTTTAG AAAA CTAAAGACTCTTTTC TTAGGTTTAGGAAGT TERM 210 234189 - 234212 + r 100 -12.6 -4.75309 | opp_overlap 234189, overlap 234184 AGTATATAAAAAAAA GAGTCTTTAG AAAA CTAAAGACTC TTTTCTTAGGTTTAG TERM 211 234212 - 234189 - R 100 -12.6 -6.0427 | opp_overlap 234184 234189 AGTATATAAAAAAAA GAGTCTTTAG AAAA CTAAAGACTC TTTTCTTAGGTTTAG A1I_01210 234998 - 234249 - | hypothetical protein TERM 212 235120 - 235078 - R 79 -7.3 -4.47271 | opp_overlap 235078 TAAATCTAATGAAAA TAGTTCCAAGTAATAGAAA AGTTA TTTTAATTACTTGAAACTA TTAAATATTGCTTAT A1I_01215 235829 - 235143 - | putative outer surface protein A1I_01220 236319 - 235996 - | ferredoxin A1I_01225 237016 - 236324 - | Heme exporter protein C TERM 213 237143 - 237173 + H 84 -8.6 -4.33785 | opp_overlap 237150, overlap 237150 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 214 237150 - 237166 + H 95 -6.7 -5.77677 | opp_overlap 237150, overlap 237143 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 215 237166 - 237150 - H 78 -6.7 -4.67755 | opp_overlap 237150 237143 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 216 237277 - 237296 + H 75 -9.4 -3.01924 | opp_overlap 237268 237266 237277 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 217 237296 - 237277 - H 76 -9.4 -3.06087 | opp_overlap 237277, overlap 237268 237266 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_01230 237454 - 238410 + | transposase A1I_01235 238601 - 241216 + | DNA polymerase I TERM 218 241246 - 241230 - T 73 -9.5 -2.69674 | opp_overlap 241230 241233, overlap 241233 AGATATAGTACAGGA CAATCTC AGG GAGATTG TATTAACTCATGAGA TERM 219 241230 - 241246 + T 76 -9.5 -3.10796 | opp_overlap 241230 241233, overlap 241233 AGATATAGTACAGGA CAATCTC AGG GAGATTG TATTAACTCATGAGA TERM 220 241941 - 241957 + T 71 -3.1 -5.26316 | CTCAACAGAATCCTT TAAAGTT AAT AATTTTA TTTTTTCTAAACTCA TERM 221 244235 - 244248 + T 70 -5.3 -4.61916 | AATTACTGTTTTTTT TTAGC GTTT GCTAA TTCTTTATTTTTTAT TERM 222 244481 - 244497 + T 85 -8.1 -4.66833 | TAAGTATTTGCATAT GCTAAAA TAT TTTTAGC TTTTTCCGGTTCAAA A1I_01250 247672 - 245036 - | pyruvate phosphate dikinase TERM 223 245191 - 245175 - G 71 -8.7 -2.82623 | opp_overlap 245170 245175 245175, overlap 245172 TGCTCGCCACAAGCA CCCAGCT TTA AGCTAGG GTTGCTGCTTTTTCC TERM 224 247994 - 247976 - H 75 -7.4 -4.14392 | CGGTAAGGGTGAAAA GGTGTGGT AAG AGCACACC GGTAAGTTGGTAACA A1I_01255 248355 - 249023 + | glutathione S-transferase A1I_01260 249055 - 249204 + | hypothetical protein TERM 225 249218 - 249201 - f 73 -5.7 -4.63218 | opp_overlap 249201 TTCTGTGGAAGAAAA CTAAAAT AATT ATTTTAG TTTATTGACAACGAG A1I_01265 249286 - 249837 + | BioY family protein TERM 226 250020 - 249992 - f 87 -8.4 -4.73105 | opp_overlap 249999, overlap 249999 ATCCAGAAAAAATAA CAAAAAATGCTA ATTTA TAGCATTTTTTA ACTAGATTGCTTCGT TERM 227 250013 - 249999 - f 88 -4.3 -5.80727 | opp_overlap 249999, overlap 249992 AAAAATAACAAAAAA TGCTA ATTTA TAGCA TTTTTTAACTAGATT TERM 228 249999 - 250013 + F 72 -4.3 -5.10497 | opp_overlap 249999 249992 AAAAATAACAAAAAA TGCTA ATTTA TAGCA TTTTTTAACTAGATT TERM 229 250092 - 250105 + F 70 -3.9 -5.10064 | opp_overlap 250092 TCCATGCAACAATAA GATTT TTTT AAATC TTTTTCTATCTTGAG A1I_01270 250177 - 251469 + | folylpolyglutamate synthase TERM 230 251615 - 251587 - f 95 -11.7 -3.21695 | TTACTATTAACTCAA GGTCGTTAACTGC GTA GCGGGTAACGACC GCTATCAACGCTGGT TERM 231 252488 - 252512 + F 72 -5.1 -4.69326 | opp_overlap 252491, overlap 252474 252491 GTAGTTTTGTAAAGC TAATTTTCATC TAT GATGAGAATGA TTTTGTGTTAAATAT A1I_01285 252967 - 254187 + | putative dihydrouridine synthase Dus A1I_01290 254187 - 255131 + | hypothetical protein TERM 232 255178 - 255190 + T 76 -9.1 -3.08133 | GCACGTTCGGTGTCA TGCCG TGT CGGCA TTGCCTGCGTGGATC TERM 233 255251 - 255288 + T 85 -5.9 -5.40072 | opp_overlap 255261, overlap 255254 255255 CTTGGGAACTAGATC TAGTTAAAAATATCAAT AAAT GTTGATATTTTTAGTTG TTTTTTTGGACCCCG TERM 234 255254 - 255285 + T 85 -7.6 -4.79949 | opp_overlap 255261, overlap 255251 255255 GGGAACTAGATCTAG TTAAAAATATCAAT AAAT GTTGATATTTTTAG TTGTTTTTTTGGACC TERM 235 255255 - 255284 + T 76 -8.9 -3.46885 | opp_overlap 255261, overlap 255254 255251 GGAACTAGATCTAGT TAAAAATATCAAT AAAT GTTGATATTTTTA GTTGTTTTTTTGGAC TERM 236 255297 - 255321 + T 76 -9.9 -2.8082 | overlap 255296 TTAGTTGTTTTTTTG GACCCCGTGGT CAA GCCATGGGGGC ATTGTTGCGTGGGTC A1I_01295 255800 - 255558 - | hypothetical protein A1I_01300 256486 - 255929 - | hypothetical protein TERM 237 256685 - 256701 + H 72 -6.7 -4.11092 | overlap 256684 ACCAAATACAGTATG CTTATAT ATG ATATAAG TCTTTTTGGTTGTTC A1I_01305 256781 - 257410 + | superoxide dismutase A1I_01310 257420 - 259183 + | putative esterase A1I_01315 259521 - 259192 - | hypothetical protein TERM 238 259318 - 259279 - G 76 -9.7 -2.98786 | overlap 259314 TATAGTAGAATCACA TCCAGATATTTTATTAA CTTTAC CTAATAAAATATCTGAA AAGTCAGCATTATAT TERM 239 259491 - 259539 + g 83 -4.4 -5.60993 | opp_overlap 259497 259499 259518, overlap 259492 TACGAATTAGCTTAT AGTTAAGAGTGTCATCCCGTGG ACAAG CCACGGGATGACACCGAGGGCG TTTTTTTATCCACGC TERM 240 259492 - 259538 + g 74 -7.9 -3.95873 | opp_overlap 259497 259499 259518, overlap 259491 ACGAATTAGCTTATA GTTAAGAGTGTCATCCCGTGG ACAAG CCACGGGATGACACCGAGGGC GTTTTTTTATCCACG TERM 241 259532 - 259497 - G 100 -18.5 -3.12999 | gap 1, opp_overlap 259492 259491, overlap 259499 259518 TTAGCTTATAGTTAA GAGTGTCATCCCGTGG ACAAG CCACGGGATGACAC-C GAGGGCGTTTTTTTA TERM 242 259531 - 259499 - G 100 -22.2 -3.12505 | opp_overlap 259492 259491, overlap 259497 259518 AGCTTATAGTTAAGA GTGTCATCCCGTGG ACAAG CCACGGGATGACAC CGAGGGCGTTTTTTT A1I_01320 259743 - 259970 + | antitoxin of toxin-antitoxin (TA) system StbD A1I_01325 259974 - 260246 + | cytotoxic translational repressor of toxin-antitoxin (TA) system RelE TERM 243 260251 - 260237 - T 75 -4.4 -5.18357 | overlap 260250 TAAGTTATTAAAAAA TATTTT CTG AAAATA AAATCTTTATAAGTC A1I_01330 260754 - 260338 - | hypothetical protein TERM 244 260651 - 260669 + g 71 -7.5 -3.54919 | ATCATTAAATCCCTA TCTATCC CATTT GGATAGA TTTCCCGCAATAATT lpxD 261397 - 262380 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 262381 - 262818 + | (3R)-hydroxymyristoyl-ACP dehydratase A1I_01345 262829 - 263674 + | UDP-N-acetylglucosamine acyltransferase TERM 245 263756 - 263780 + T 100 -11.6 -5.63517 | opp_overlap 263756 CTATTAATACAAAAA GGCTTAACAA AAGAA TTGTTAAGCC TTTTTTCTTTAAACA TERM 246 263780 - 263756 - T 100 -11.6 -5.1244 | opp_overlap 263756 CTATTAATACAAAAA GGCTTAACAA AAGAA TTGTTAAGCC TTTTTTCTTTAAACA A1I_01350 264749 - 263817 - | hypothetical protein TERM 247 264910 - 264869 - R 72 -4 -5.06961 | overlap 264870 264871 ATTAACAAAAATAAA GCTAGGGATTTAAAAT AAGTAGTAGA ATTTTAAATCCCTAAA GTATCTCTATATAAC TERM 248 264908 - 264871 - R 71 -8.8 -2.75415 | overlap 264870 264869 TAACAAAAATAAAGC TAGGGATTTAAAAT AAGTAGTAGA ATTTTAAATCCCTA AAGTATCTCTATATA A1I_01355 265135 - 264962 - | hypothetical protein secF 265207 - 266118 + | preprotein translocase subunit SecF A1I_01365 266321 - 267574 + | NADH dehydrogenase I subunit F A1I_01370 267741 - 268610 + | Signal peptidase I rnc 268610 - 269293 + | ribonuclease III A1I_01380 269300 - 269932 + | TPR repeat-containing protein era 269949 - 270836 + | GTP-binding protein Era TERM 249 271096 - 271076 - f 100 -13.3 -2.90956 | AAATCATTTTATAGA TCCCGTGGC GGG ACCACGGGA TGACACGGTAGGGAT ruvC 271116 - 271589 + | Holliday junction resolvase A1I_01395 271591 - 272286 + | tRNA/rRNA methyltransferase A1I_01400 272795 - 272373 - | nucleotidyltransferase substrate binding protein A1I_01405 273081 - 272776 - | nucleotidyltransferase A1I_01410 274277 - 273096 - | putative nucleoside-diphosphate-sugar epimerase A1I_01415 275230 - 274274 - | hypothetical protein A1I_01420 275338 - 276348 + | protease activity modulator HflK TERM 250 276711 - 276724 + G 74 -3.9 -5.14965 | TTAAAGTTCCGTTAA TTCAA AATG TTGAA TTTTTTGATAAGCGT TERM 251 277342 - 277327 - g 75 -4.8 -5.00895 | TTTAGTATATAAAAA TTCTTT AAAG AAAGAA GATACTAATTTTATT A1I_01425 276548 - 277405 + | membrane protease subunit stomatin/prohibitin-like protein TERM 252 278894 - 278881 - g 74 -5.3 -4.76171 | opp_overlap 278881, overlap 278876 TAAAAAATCAGAAAA GCAAA ATAT TTTGC TTTTGATTGAGAGAG A1I_01430 277409 - 278947 + | periplasmic serine protease A1I_01435 279122 - 279868 + | hypothetical protein A1I_01440 280019 - 280396 + | succinate dehydrogenase cytochrome b-556 subunit A1I_01445 280599 - 280976 + | succinate dehydrogenase hydrophobic membrane anchor protein A1I_01450 280994 - 281230 + | hypothetical protein TERM 253 281342 - 281328 - g 81 -2.2 -5.9218 | overlap 281341 GATATAACAAAAAAA TATTTA ACT CAAATA CATAATAAATGTATA A1I_01455 281220 - 281507 + | toxin of toxin-antitoxin (TA) system ParE sdhA 281536 - 283326 + | succinate dehydrogenase flavoprotein subunit TERM 254 283519 - 283488 - f 72 -6.6 -4.16943 | gap 1, overlap 283491 GGTGACAGGGGAAAA TGA-TCCACGCAGGC AAT GCCTCCGTGGAATGA CATAAACAAGCCATG TERM 255 283515 - 283491 - f 100 -14.3 -3.10545 | overlap 283488 GACAGGGGAAAATGA TCCACGCAGGC AAT GCCTCCGTGGA ATGACATAAACAAGC A1I_01465 283605 - 284261 + | amino acid ABC transporter permease TERM 256 284257 - 284247 - f 78 -4 -5.48787 | ATAATAGAGAAAAAA CTAA TTG TTAG TTAAAACATACTTGC TERM 257 284325 - 284343 + F 76 -7.6 -3.91434 | opp_overlap 284338 AATTTAATTTGACAG TGTAAATA TAT TATTTACA TTTGTAAAATCATTT TERM 258 284395 - 284363 - f 84 -8.6 -4.27686 | opp_overlap 284369, overlap 284364 284369 TAAAATCATTTAAAA TTCAAAGGGCAAAA GTAGT TTTTGCCCTTTAAT CATCGTATGTACCTT TERM 259 284394 - 284364 - f 93 -12.1 -3.15527 | opp_overlap 284369, overlap 284363 284369 AAAATCATTTAAAAT TCAAAGGGCAAAA GTAGT TTTTGCCCTTTAA TCATCGTATGTACCT TERM 260 284389 - 284369 - f 90 -9.8 -3.9373 | opp_overlap 284369, overlap 284364 284363 CATTTAAAATTCAAA GGGCAAAA GTAGT TTTTGCCC TTTAATCATCGTATG TERM 261 284369 - 284389 + F 89 -10.5 -3.81287 | opp_overlap 284369 284364 284363 CATTTAAAATTCAAA GGGCAAAAG TAG TTTTTGCCC TTTAATCATCGTATG rpsL 284556 - 284945 + | 30S ribosomal protein S12 TERM 262 285085 - 285107 + G 73 -7.8 -3.66874 | GGAAAAAAAGCTCTC GCAGAAAAAA TAG TTTATTCTGC TTTCGATAAAATTGA A1I_01475 285061 - 285462 + | 30S ribosomal protein S7 TERM 263 286271 - 286253 - g 71 -5.3 -4.66609 | opp_overlap 286253 286260, overlap 286259 TAGTGCATTTAAAAA TAAAGGC GTACA GCCTCTA CTTGATGCTGTAGTA A1I_01480 285465 - 287558 + | elongation factor G TERM 264 287610 - 287626 + F 85 -4.5 -5.64421 | TAAATAAAAAGGTTT TCAATAA ATT TTGTTGA TTTTTTATTTAAAAT TERM 265 287689 - 287673 - f 70 -8.7 -2.63631 | overlap 287686 TCAATTGGTAGAGCA CCGGTCT CCA AAACCGG AGGTTGCGGGTTCGA secE 287764 - 287964 + | preprotein translocase subunit SecE TERM 266 288059 - 288039 - g 75 -2.5 -5.53079 | overlap 288041 288056 AAAAGATACAAAAAA GTGGTATGT TAT ACATACTGC ATCAGGAGCAGAAAA nusG 287983 - 288555 + | transcription antitermination protein NusG rplK 288657 - 289091 + | 50S ribosomal protein L11 rplA 289097 - 289816 + | 50S ribosomal protein L1 rplJ 290094 - 290603 + | 50S ribosomal protein L10 rplL 290642 - 291013 + | 50S ribosomal protein L7/L12 TERM 267 291000 - 291018 + F 70 -4 -4.92783 | opp_overlap 291015 CTGCTGGAGCAAAAG TAGAATTA AAG TAATTTTA TTTTTATAATAAATT TERM 268 291585 - 291614 + F 79 -5.2 -5.28176 | GTCTATTAAGTTTCT TTAACTGTTAAC TTCAAT GTTGATAGTTAA TTTTTTATCAGTCAG TERM 269 293930 - 293913 - g 70 -4.1 -5.02074 | CTATTGGTCAAAAAA CCGAAAG TGCA CCTTCAG TTGATATTTATAACT TERM 270 294814 - 294794 - g 85 -6.9 -5.06451 | opp_overlap 294797 TATGATGGCAAAAAA GAAGCTCTT AAT AAGAGGTTC GCTACTAAGGTAGAA rpoB 291638 - 295756 + | DNA-directed RNA polymerase subunit beta A1I_01520 295898 - 300103 + | DNA-directed RNA polymerase subunit beta' TERM 271 300169 - 300195 + T 78 -9.7 -3.06302 | opp_overlap 300169 300174, overlap 300171 300174 AAATTCAGCTATTAA TATAACAAGAT ATAGA ATCTTGTTATA TTGACTAAAAATAGT TERM 272 300195 - 300169 - T 78 -9.7 -3.19656 | opp_overlap 300169 300171 300174, overlap 300174 AAATTCAGCTATTAA TATAACAAGAT ATAGA ATCTTGTTATA TTGACTAAAAATAGT A1I_01525 300488 - 300252 - | hypothetical protein TERM 273 300591 - 300624 + r 70 -3.5 -5.12971 | gap 1, overlap 300597 ATGTCCATTGAAATT TTTATA-TTTGTAAAA TTA TTTTACAAATTATTAA TTTTTCTTAAATGTT TERM 274 300597 - 300617 + r 81 -8.5 -4.06335 | overlap 300591 ATTGAAATTTTTATA TTTGTAAAA TTA TTTTACAAA TTATTAATTTTTCTT A1I_01530 303647 - 300621 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 275 303001 - 303021 + g 74 -9.1 -3.17146 | overlap 303000 GTTTTAATGTTACCG GCAGGATAA TCT TTATTCTGC TCTCTTATGGCAACC TERM 276 303583 - 303569 - G 72 -2.8 -5.47218 | overlap 303571 GCTTAGTGAAAAAAA TTGTTC CAA GAACTA AAATAACTAAACTTA TERM 277 303765 - 303722 - H 70 -6.3 -4.13728 | overlap 303713 TATACAGCTTTAAAA GCATAACTGATGTAAAA TGGCTACATT TTTTTCATCAGTTATAC AATTATATATATCTT A1I_01535 303944 - 304270 + | DNA-binding protein HU TERM 278 304319 - 304338 + F 70 -8.6 -2.69042 | overlap 304315 CCTGAGGTACAGTCG TGGGACTG TTAG CAGTCCTA TAGCTTTAGTAATAT TERM 279 304459 - 304447 - g 74 -4.1 -5.28983 | opp_overlap 304447 TTTAAAACATAAAAA GCTAC ATA ATAGC TGGCTTATTGAAGCA A1I_01540 304406 - 305206 + | DNA polymerase III subunit delta' TERM 280 305878 - 305840 - g 77 -8.2 -3.91846 | overlap 305847 AAAACTAAATTTAAA TGCAAAACCGCCAGTAAA TCT TTTAATGGTGGGCTTGCA AGGTAGTGGTAAAAC TERM 281 305871 - 305847 - g 72 -5.7 -4.37198 | overlap 305840 AATTTAAATGCAAAA CCGCCAGTAAA TCT TTTAATGGTGG GCTTGCAAGGTAGTG A1I_01545 305547 - 306896 + | Signal recognition particle protein TERM 282 307170 - 307187 + GF 70 -3.5 -5.05782 | gap 1, opp_overlap 307169 307170, overlap 307170 307171 AGTGCATTTGAGAAT C-CTTTAG TTT CTAAAGAG TTTTTTGAGATGCAT TERM 283 307455 - 307444 - gf 71 -3 -5.25906 | opp_overlap 307444, overlap 307445 AGAAATCAACAAAAA GTAA AAAG TTAC CTTTCATATATCCTT A1I_01550 307119 - 307949 + | transposase A1I_01555 307921 - 308034 + | coproporphyrinogen III oxidase A1I_01560 308126 - 308242 + | hypothetical protein A1I_01565 308227 - 308310 + | hypothetical protein TERM 284 309041 - 309059 + G 71 -7.6 -3.40403 | opp_overlap 309040 AATCTCAAAAATATT TTAGATAT GAG ATATCTAA TTATGCTAAAAAAGG A1I_01570 308329 - 309495 + | coproporphyrinogen III oxidase TERM 285 309500 - 309524 + T 73 -5.7 -4.68528 | opp_overlap 309499 309501, overlap 309501 TACAAGTCTGAAAAT AGAGAGTACTA ACT TCGTACTCTCC TTATTTTTTAGCTTT TERM 286 309523 - 309501 - T 81 -9.2 -3.67402 | opp_overlap 309500 309501, overlap 309499 ACAAGTCTGAAAATA GAGAGTACTA ACT TCGTACTCTC CTTATTTTTTAGCTT TERM 287 309501 - 309523 + T 79 -9.2 -3.38677 | opp_overlap 309501 309499, overlap 309500 ACAAGTCTGAAAATA GAGAGTACTA ACT TCGTACTCTC CTTATTTTTTAGCTT A1I_01575 309693 - 309544 - | hypothetical protein A1I_01580 309989 - 309648 - | hypothetical protein A1I_01595 311060 - 311701 + | hypothetical protein A1I_01600 312526 - 311822 - | hypothetical protein A1I_01605 312538 - 312681 + | hypothetical protein A1I_01610 313800 - 313087 - | integral membrane protein A1I_01615 314596 - 313844 - | dihydrodipicolinate reductase A1I_01620 315075 - 314593 - | flavoprotein oxygenase DIM6/NTAB family protein A1I_01625 315785 - 315060 - | amino acid ABC transporter substrate-binding protein TERM 288 315468 - 315450 - G 83 -10.4 -3.33261 | opp_overlap 315447 315445 315444 CTCTAACCTGTATAA TACAGCAA ATT TTGCTGTA GCATAATTATCGGAA TERM 289 315837 - 315889 + r 91 -11.5 -3.06796 | gap 1, overlap 315829 315840 TATGTCATCCCGCGA CTTGATCGCAGGATCTT-GTGTTC CAGACT GTATACTGAGATCCCGCGATCAAG TTAGCTAGGATGACA gatB 317364 - 315913 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 290 317207 - 317193 - G 71 -8.6 -2.79842 | overlap 317177 317190 AATACTCATTAAGCA CTGGTA ACA TACCAG GCATTGCCGCATCAA gatA 318848 - 317367 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 291 318571 - 318592 + g 73 -8.9 -2.80077 | opp_overlap 318571, overlap 318568 AACTCTCTTAATATA TTAGAACAA GCAG TTGTTCTAA TGCCTTTTGTACAAA TERM 292 318592 - 318571 - G 74 -8.9 -3.07192 | opp_overlap 318568 318571 AACTCTCTTAATATA TTAGAACAA GCAG TTGTTCTAA TGCCTTTTGTACAAA gatC 319152 - 318850 - | aspartyl/glutamyl-tRNA amidotransferase subunit C frr 319924 - 319364 - | ribosome recycling factor pyrH 320804 - 320085 - | uridylate kinase A1I_01655 321115 - 320801 - | putative monovalent cation/H+ antiporter subunit E A1I_01660 322343 - 321105 - | MFS-type multidrug resistance protein B TERM 293 321473 - 321499 + gH 73 -8 -3.50119 | overlap 321471 TCGCATTGCCTACTT TTTCCCTTGGCA TAT TGCCAAGAGCAA TATTATTAGTTGGTA A1I_01665 322279 - 322413 + | hypothetical protein A1I_01670 322667 - 322506 - | multidrug resistance protein B A1I_01675 323012 - 322806 - | hypothetical protein TERM 294 323836 - 323848 + G 74 -6.3 -4.386 | ATTAAATCTAGTAGT TTCTG AAA CAGAA TTTTCTCAAACCTTA A1I_01680 323531 - 323968 + | hypothetical protein A1I_01685 325300 - 323972 - | hypothetical protein TERM 295 325030 - 325053 + g 74 -6.1 -4.35524 | overlap 325031 TTATAGAATTGGCAC TTACTGTGA TTAAAT TCACAGTAG TTTTAGATTTAGGAA TERM 296 325556 - 325566 + H 70 -8.2 -3.10245 | CTTTTCGATCCACAC GGGC AAT GCCC TCTATATTAGGATGC TERM 297 325798 - 325781 - H 71 -7.1 -3.78351 | ATAAAGCCGACTAAA TCCTTTA ATGA TAAAGGA AAAACCGAAATCATA TERM 298 326111 - 326075 - H 72 -4.6 -4.88067 | opp_overlap 326085 AGGCATCTAGAAAAA CAACTTTTAATACTAA TAATT TTAGTATTTTAAGCTG GATCCTGCGATCAAG A1I_01700 329125 - 329331 + | hypothetical protein A1I_01705 329427 - 329867 + | oligoketide cyclase/lipid transport protein TERM 299 329860 - 329898 + T 70 -8.5 -3.14881 | opp_overlap 329860 329864, overlap 329864 GGGCGAGAGGAATTA TTAAGTAAGGTAAAG AAACTTTAA TTTTACCTTACTTAA TTGATAGAAAACTTA A1I_01710 330402 - 329911 - | hypothetical protein TERM 300 330116 - 330096 - G 71 -9.1 -2.59191 | overlap 330095 330098 CTACATTTTCAGAAT TAGCAGCTA CTG TAACTGCTA CAGTACCTACCATAC A1I_01715 331205 - 330522 - | ribosomal RNA large subunit methyltransferase J nusB 331665 - 331195 - | transcription antitermination protein NusB TERM 301 331982 - 331968 - g 70 -4.3 -4.74103 | opp_overlap 331968 TCTTTAATGTAAAAA TCGAA GAATT TTCGA TAGGTTTCGGCAAAG A1I_01725 331871 - 332929 + | putative membrane-associated zinc metalloprotease TERM 302 335300 - 335276 - g 72 -5.7 -4.40561 | overlap 335273 TGCGGTTAAAAAGAA GAAATACGACG ATA CGCAGCATTTC CACTTAAGATTTTCT A1I_01730 333021 - 335327 + | Outer membrane protein omp1 TERM 303 335499 - 335535 + T 72 -4.7 -4.89852 | opp_overlap 335509, overlap 335502 335503 335509 TTTATTCACGGGATC CAGTTAAAAATATCAGT AAT ATTGATATTTTTAGTTA TTTTTCTGGATCTAG TERM 304 335502 - 335532 + T 89 -8.6 -4.5448 | opp_overlap 335509, overlap 335499 335503 335509 ATTCACGGGATCCAG TTAAAAATATCAGT AAT ATTGATATTTTTAG TTATTTTTCTGGATC TERM 305 335503 - 335531 + T 80 -9.9 -3.31603 | opp_overlap 335509, overlap 335502 335499 335509 TTCACGGGATCCAGT TAAAAATATCAGT AAT ATTGATATTTTTA GTTATTTTTCTGGAT TERM 306 335509 - 335525 + T 75 -4.5 -5.10004 | opp_overlap 335509, overlap 335503 335502 335499 GGATCCAGTTAAAAA TATCAGT AAT ATTGATA TTTTTAGTTATTTTT A1I_01735 336715 - 336356 - | hypothetical protein A1I_01740 337052 - 336687 - | hypothetical protein TERM 307 336970 - 336983 + gr 72 -2.4 -5.46698 | overlap 336980 TGAAAAACTTTAAGG GTAG GAAGTG CTAC TTTTTTAATTTTAAA A1I_01745 337335 - 337108 - | cation transport regulator ChaB TERM 308 337461 - 337475 + r 72 -4.3 -5.08824 | opp_overlap 337452 337461 AAGGAAGTAAAAAAA TGCTA ACTTA TAGCA TTTTTTAGCTGAACC TERM 309 337475 - 337461 - R 88 -4.3 -5.66868 | opp_overlap 337461, overlap 337452 AAGGAAGTAAAAAAA TGCTA ACTTA TAGCA TTTTTTAGCTGAACC A1I_01750 338905 - 337775 - | hypothetical protein TERM 310 338827 - 338839 + g 70 -4.1 -5.0538 | GATATTGTTTAGCTA GCTTA TGA TAGGC TTTTTTAAGATCAGC dnaK 340944 - 339049 - | molecular chaperone DnaK A1I_01770 342638 - 342958 + | hypothetical protein TERM 311 343100 - 343083 - g 95 -4.9 -6.22802 | TGCTACAAAAAAAAA GCAAATC GGAA GATTTAC TACCTCCACCTAATT TERM 312 343517 - 343505 - g 71 -7.7 -3.48276 | GGTTTTGGCATAGAA GCTCA AAA TGAGC AAAATAGTAAAATTA A1I_01775 343067 - 344143 + | ankyrin repeat-containing protein A1I_01780 344127 - 344453 + | hypothetical protein TERM 313 344470 - 344497 + T 100 -14.4 -3.26546 | opp_overlap 344472, overlap 344461 TCGTTATTGTTCATA TATCATTCCTGT TTTC ACAGGAATGATA TTGATAGATTTATAA TERM 314 344495 - 344472 - T 100 -12.6 -2.87931 | opp_overlap 344470 344461 GTTATTGTTCATATA TCATTCCTGT TTTC ACAGGAATGA TATTGATAGATTTAT A1I_01785 344800 - 344507 - | hypothetical protein A1I_01790 345274 - 345765 + | hypothetical protein holA 345762 - 346754 + | DNA polymerase III subunit delta A1I_01800 346775 - 347314 + | ubiquinone biosynthesis protein coq7 TERM 315 348429 - 348441 + G 72 -4.9 -4.79223 | TGGTGCACATGTAAT TATAG GTA CTATA TTTTTAATAGTATGC A1I_01805 347761 - 348594 + | cytochrome c oxidase subunit III A1I_01810 348760 - 349128 + | VirB2-like protein TERM 316 349191 - 349151 - f 93 -11.4 -3.61268 | opp_overlap 349151 349157, overlap 349157 CATTTAAGTTCTAAA GATAAAGTACTCATAAGA TTTGC TCTTATGGGTACTTTTTC TTTTTTTAAGATTTA TERM 317 349151 - 349191 + F 100 -13.6 -5.49809 | opp_overlap 349151 349157, overlap 349157 CATTTAAGTTCTAAA GATAAAGTACTCATAAGA TTTGC TCTTATGGGTACTTTTTC TTTTTTTAAGATTTA TERM 318 349157 - 349185 + F 100 -11.2 -5.86609 | opp_overlap 349151 349157, overlap 349151 AGTTCTAAAGATAAA GTACTCATAAGA TTTGC TCTTATGGGTAC TTTTTCTTTTTTTAA TERM 319 349185 - 349157 - f 84 -9 -4.33258 | opp_overlap 349157 349151, overlap 349151 AGTTCTAAAGATAAA GTACTCATAAGA TTTGC TCTTATGGGTAC TTTTTCTTTTTTTAA A1I_01815 349375 - 350136 + | DNA uptake lipoprotein TERM 320 350268 - 350284 + F 84 -9.5 -3.75332 | opp_overlap 350270 GAAATTCATCGAGTA GACTATG TTT CATAGTC TTTCAGTTAAAAACT TERM 321 351706 - 351690 - g 76 -6.5 -4.64657 | overlap 351681 TGAAAGGCTCAAAAA GCTTAGC TCA GCTACGC AAGTAATAGTTATAA TERM 322 351898 - 351945 + G 80 -10.7 -2.66435 | gap 1, opp_overlap 351901 351904, overlap 351897 TTAAAGGCGGCTAAG GAACTACTTTGTCATCCCGTGG CTTGA CCACGGGATGACAAAG-AGAAA TCATATAATAAAGCT A1I_01820 350272 - 351924 + | DNA repair protein RecN TERM 323 351942 - 351901 - f 100 -21.9 -3.34192 | gap 1, opp_overlap 351898 351897, overlap 351904 AAGGCGGCTAAGGAA CTACTTTGTCATCCCGTGGC TTG ACCACGGGATGACAAAG-AG AAATCATATAATAAA TERM 324 351940 - 351904 - f 100 -24.7 -2.84098 | opp_overlap 351898 351897, overlap 351901 GCGGCTAAGGAACTA CTTTGTCATCCCGTGGC TTG ACCACGGGATGACAAAG AGAAATCATATAATA TERM 325 352313 - 352296 - g 72 -4.9 -4.75967 | AATTACAAAAAAGAA TAGTAGC TGCA ACTACTA AAGCTGAACTTGTTT A1I_01825 351989 - 353476 + | thermostable carboxypeptidase kgd 353742 - 356525 + | alpha-ketoglutarate decarboxylase A1I_01835 356527 - 357729 + | dihydrolipoamide acetyltransferase TERM 326 358093 - 358109 + G 74 -6.7 -4.25016 | AGATTTTCCCTAAGC TTTTTGA AAG TCAAAAA TTCTTTGTTACTAAT A1I_01840 357750 - 358166 + | putative 6-pyruvoyl tetrahydropterin synthase A1I_01845 358169 - 358483 + | periplasmic divalent cation tolerance protein TERM 327 358746 - 358768 + G 85 -4.9 -5.52986 | GTAGGCATGAAAGCG GTAGTAGCT TTTTT AGGTACTAC TTTTTTTGCTACAGT A1I_01850 358533 - 359738 + | Na+/H+-dicarboxylate symporters A1I_01855 361726 - 359741 - | excinuclease ABC subunit B A1I_01860 361797 - 362093 + | glutaredoxin GrxC TERM 328 362225 - 362177 - f 76 -6.1 -4.57569 | GCATGGCTCGAAAAA CGCTCT-CGATGTCATCCCGTGG CTTGT CCACGGGATC-CAGCATAAAGCG AGAGCAATCGAGCTT A1I_01875 364142 - 364645 + | hypothetical protein TERM 329 364949 - 364939 - f 71 -6.8 -3.99805 | CTTCAAAAACCCAAA CCCA AGA TGGG CAGTATCAACCATAA TERM 330 365087 - 365111 + F 79 -7.2 -4.45544 | TTTTGAACGCCCCGA CCACCAAAAT TATAT AGTTTGGTGG TTTTAATTAATCGGG A1I_01880 365136 - 365315 + | hypothetical protein TERM 331 365416 - 365447 + F 81 -9.5 -3.62096 | gap 1 GTGGATCAGTTTCCC CTGTCATCCCGTGG CTTGT CCACGGGATC-CAG TTTAAAATACTAAAA TERM 332 366507 - 366528 + G 77 -2.9 -5.52384 | CCACAATGGAGGTAC TTGCAAGTG TTGG CTCTAGCAA TTTTTTTAATAACGA TERM 333 367062 - 367045 - g 86 -11.3 -2.93109 | overlap 367038 GACAAAATTACTAGA TTCCCGC TTTT GCGGGAA TGACATACCTGAAAC A1I_01885 365588 - 367954 + | bifunctional penicillin-binding protein 1C TERM 334 368432 - 368412 - g 100 -8.4 -5.32882 | TAGCACCACAAAAAA CAACAGTT AATGA AACTGTTG AGAACTTTATTGCAA TERM 335 368524 - 368506 - g 71 -3.2 -5.14698 | AAATTTAAAAGAAAA TGTTAC ATTCGTA GTAACA AAATTTAATAAAAAT A1I_01890 367955 - 368929 + | hypothetical protein TERM 336 369289 - 369277 - g 73 -7.7 -3.64431 | GAATATTATAGAGAA GCCAT AAA ATGGC TGAATATATATAATG A1I_01895 368941 - 369477 + | hypothetical protein TERM 337 369661 - 369675 + G 77 -10 -2.57132 | overlap 369660 ATATTTTAGCCATGA GCGTAG AAT CTACGC CTTGTAAAAAACAGA A1I_01900 369453 - 369821 + | hypothetical protein TERM 338 369865 - 369838 - T 73 -9.4 -2.55253 | opp_overlap 369825, overlap 369828 369841 369844 ATTAACGCCAATTTA GAATAAGATTCT ACAA AAAATCTTATTC TAAACAATGCGTTAT A1I_01905 370080 - 369886 - | hypothetical protein A1I_01910 370659 - 370204 - | lysozyme TERM 339 370717 - 370706 - H 83 -3 -5.68023 | opp_overlap 370706 TGATAATCAAAAAAA TAGT ATCG ACTA AGTTTTTCTAACTAA TERM 340 370931 - 370949 + G 77 -9 -3.31598 | opp_overlap 370928 GATAATAATGCACAG TCGTTTTA TGA TAAAACGA TTAATCTAGATTTAT A1I_01915 370889 - 371482 + | tellurite resistance protein-related protein A1I_01920 371838 - 371500 - | hypothetical protein A1I_01925 372077 - 371826 - | hypothetical protein A1I_01930 372546 - 372148 - | hypothetical protein A1I_01935 372667 - 372885 + | hypothetical protein A1I_01940 372895 - 373194 + | putative transcriptional regulator A1I_01945 373784 - 373290 - | leucine-rich repeat-containing protein TERM 341 374347 - 374361 + H 77 -7.2 -4.32048 | ATATAATTAGACCCA GAAAGT AAT ACTTTC TTTTGCATGTTATTG A1I_01950 374381 - 374683 + | cold shock-like protein TERM 342 374735 - 374702 - f 78 -6.1 -4.72986 | overlap 374704 TATTTGTACCAAAAA CAGCTATCCAAAGTT TTCA AATTTTGGATAGCCT CGTCACCTTTTACAA TERM 343 374733 - 374704 - f 95 -10.9 -3.98256 | overlap 374702 TTTGTACCAAAAACA GCTATCCAAAGTT TTCA AATTTTGGATAGC CTCGTCACCTTTTAC TERM 344 374751 - 374769 + F 85 -7.6 -4.75289 | opp_overlap 374751 CGTCACCTTTTACAA CAAAATAT TAG ATATTTTG TTTTGTCTTATAATA TERM 345 375200 - 375185 - g 71 -3.2 -5.20783 | opp_overlap 375198 ACCGAAATACAAAAA CAATCG ATTC CGGTTG CTATCGCAGGTTCTG A1I_01955 375104 - 376339 + | ATP-dependent RNA helicase RhlE TERM 346 376454 - 376469 + T 71 -3.2 -5.28176 | opp_overlap 376454 CCTCTAGCACTAAAA GCTCGA TTCA TCTAGC TTTTTTCTAGATCCC TERM 347 376561 - 376516 - T 88 -3.3 -6.12328 | gap 2, opp_overlap 376520 376521 376537, overlap 376517 376518 ATAATACAAAAAAAA CTGATCCACGTGGGCAATGCC TCCCGT GGC-TTGTCCACG-GGATCTT AGGATGTAGACCGTG TERM 348 376560 - 376517 - T 74 -6.8 -4.23737 | gap 2, opp_overlap 376520 376521 376537, overlap 376516 376518 TAATACAAAAAAAAC TGATCCACGTGGGCAATGCC TCCCGT GGC-TTGTCCACG-GGATCT TAGGATGTAGACCGT TERM 349 376559 - 376518 - T 81 -10.3 -3.11802 | gap 2, opp_overlap 376520 376521 376537, overlap 376517 376516 AATACAAAAAAAACT GATCCACGTGGGCAATGCC TCCCGT GGC-TTGTCCACG-GGATC TTAGGATGTAGACCG TERM 350 376521 - 376544 + T 70 -8.8 -2.57344 | gap 1, opp_overlap 376518 376517 376516, overlap 376520 376537 ACAAAAAAAACTGAT CCACGTG-GGC AAT GCCTCCCGTGG CTTGTCCACGGGATC TERM 351 376537 - 376557 + T 100 -12.6 -3.07962 | opp_overlap 376518 376517 376516, overlap 376521 376520 CACGTGGGCAATGCC TCCCGTGG CTTGT CCACGGGA TCTTAGGATGTAGAC A1I_01960 376968 - 376825 - | hypothetical protein A1I_01965 377033 - 377866 + | AmpG A1I_01970 378300 - 378133 - | hypothetical protein TERM 352 378231 - 378246 + g 76 -6.2 -4.63542 | TAATCAGGGCTGGAT CATCAA TTTC TTGATG TTTTTCAAAATTATC A1I_01975 378398 - 378955 + | NifU-like protein TERM 353 378961 - 379002 + T 100 -15.5 -3.62275 | opp_overlap 378957 378975, overlap 378944 378962 AGAGGAGTAAATTTC TTTTCTTTGAAGAATCGTA TAAA TACGATTCTTCAAAGAAGC TTTAAAATAATGAAT TERM 354 378962 - 379001 + T 100 -19 -2.77043 | opp_overlap 378957 378975, overlap 378944 378961 GAGGAGTAAATTTCT TTTCTTTGAAGAATCGTA TAAA TACGATTCTTCAAAGAAG CTTTAAAATAATGAA TERM 355 379050 - 379017 - T 85 -10.5 -3.68798 | opp_overlap 379013 379017, overlap 379013 CTTTAAAATAATGAA TATTCAAGGTGGAAA GCGG TTCCCACGTTGAATA TAAATTTAGTTTTAT A1I_01980 379359 - 379066 - | ecotin precursor A1I_01985 381023 - 379644 - | cell division protein FtsZ A1I_01990 381858 - 381313 - | hypothetical protein TERM 356 381654 - 381674 + g 83 -6.9 -4.7497 | opp_overlap 381654 381673, overlap 381645 381656 TTGTGTTATAAGCTA TATCTGCTA GTT TAGCAGAGA TTTTTGGTAAATCCA TERM 357 381656 - 381672 + g 74 -9.5 -2.66218 | opp_overlap 381654, overlap 381654 GTGTTATAAGCTATA TCTGCTA GTT TAGCAGA GATTTTTGGTAAATC TERM 358 381724 - 381704 - G 70 -8.3 -3.04598 | opp_overlap 381703 381704 AGAAAGTTATATACA CCATGGTAC AAT GTAACATGG CATTTATTATGCTTA TERM 359 382141 - 382099 - R 76 -6.3 -4.57569 | gap 1, opp_overlap 382107, overlap 382101 382104 GTATGGCTTGAAAAA TACCACTATGTCATTCCCGC CTAT GCGGGAAGG-CATTGTTGCA TGGATCAAAAAACAC TERM 360 382139 - 382101 - R 71 -6.7 -3.90316 | gap 1, opp_overlap 382107, overlap 382099 382104 ATGGCTTGAAAAATA CCACTATGTCATTCCCGC CTAT GCGGGAAGG-CATTGTTG CATGGATCAAAAAAC TERM 361 382107 - 382133 + r 81 -9.5 -3.68569 | gap 1, opp_overlap 382104 382101 382099 TGAAAAATACCACTA TGTCATTCCCGC CTAT GCGGGAA-GGCA TTGTTGCATGGATCA A1I_01995 382930 - 382169 - | transposase A1I_02000 383124 - 382936 - | transposase TERM 362 383301 - 383282 - R 75 -9.4 -3.01924 | opp_overlap 383274 383270 383282 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 363 383282 - 383301 + r 76 -9.4 -3.06087 | opp_overlap 383282, overlap 383274 383270 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 364 383431 - 383409 - R 72 -5 -4.72617 | opp_overlap 383412, overlap 383412 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 365 383412 - 383428 + r 78 -6.7 -4.67755 | opp_overlap 383409 383412 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 366 383428 - 383412 - R 76 -6.7 -4.42118 | opp_overlap 383412, overlap 383409 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT A1I_02005 383790 - 383536 - | antitoxin of toxin-antitoxin (TA) system Phd TERM 367 383799 - 383839 + r 89 -8.7 -4.57353 | opp_overlap 383799 383804 383812 GCTTCATATAAGTAA TATAATAAATAAACTAATA TTA TATTAGCCTATTTATTATA TTTTGTATAGTACAA TERM 368 383839 - 383799 - R 100 -13.1 -3.49618 | opp_overlap 383799, overlap 383804 383812 GCTTCATATAAGTAA TATAATAAATAAACTAATA TTA TATTAGCCTATTTATTATA TTTTGTATAGTACAA TERM 369 383834 - 383804 - R 80 -8.6 -3.78837 | opp_overlap 383799, overlap 383799 383812 ATATAAGTAATATAA TAAATAAACTAATA TTA TATTAGCCTATTTA TTATATTTTGTATAG TERM 370 383826 - 383812 - R 75 -5.8 -4.77442 | opp_overlap 383799, overlap 383804 383799 AATATAATAAATAAA CTAATA TTA TATTAG CCTATTTATTATATT fumC 385278 - 383887 - | fumarate hydratase A1I_02015 385733 - 385275 - | hypothetical protein TERM 371 385846 - 385811 - R 81 -7.1 -4.59882 | opp_overlap 385814, overlap 385808 385814 TGAAAAAATAAAGAA CAATGATAACGCAAA TAGTAG TTTACGTTATCATTT TAATAAACATATATT TERM 372 385814 - 385843 + r 77 -7.3 -4.26344 | opp_overlap 385811 385808 385814 AAAAATAAAGAACAA TGATAACGCAAAT AGTA GTTTACGTTATCA TTTTAATAAACATAT TERM 373 385843 - 385814 - R 84 -8.8 -4.32342 | opp_overlap 385814, overlap 385811 385808 AAAAATAAAGAACAA TGATAACGCAAA TAGTAG TTTACGTTATCA TTTTAATAAACATAT A1I_02020 386659 - 385934 - | tRNA/rRNA methyltransferase A1I_02025 387216 - 388403 + | elongation factor Tu TERM 374 388411 - 388448 + F 100 -13.9 -4.16943 | opp_overlap 388417, overlap 388413 388417 TTAATTAGTCCACTT TATAAATACCTATTATT TTTT AATAATAGGTATTTATG TTTTAAGATGTAAAA TERM 375 388413 - 388446 + F 100 -14.3 -3.68378 | opp_overlap 388417, overlap 388411 388417 AATTAGTCCACTTTA TAAATACCTATTATT TTTT AATAATAGGTATTTA TGTTTTAAGATGTAA TERM 376 388442 - 388417 - f 95 -10.7 -3.89524 | opp_overlap 388413 388411 388417 AGTCCACTTTATAAA TACCTATTATT TTTT AATAATAGGTA TTTATGTTTTAAGAT TERM 377 388417 - 388442 + F 100 -10.7 -4.45771 | opp_overlap 388417, overlap 388413 388411 AGTCCACTTTATAAA TACCTATTATT TTTT AATAATAGGTA TTTATGTTTTAAGAT rpsJ 388497 - 388814 + | 30S ribosomal protein S10 rplC 388814 - 389461 + | 50S ribosomal protein L3 TERM 378 389721 - 389705 - g 80 -5.2 -5.1861 | GGTACTACCAAAAAA CCTTTT AAGCA AAAAGG TACAGGGAATGCAAG rplD 389516 - 390139 + | 50S ribosomal protein L4 rplW 390136 - 390432 + | 50S ribosomal protein L23 rplB 390433 - 391254 + | 50S ribosomal protein L2 rpsS 391281 - 391559 + | 30S ribosomal protein S19 TERM 379 391601 - 391586 - g 93 -6.2 -5.52079 | overlap 391580 ACAGGAAAACAAAAA TTTTGC CACG GCAAAA GCTAAATCAATTAGA rplV 391566 - 391925 + | 50S ribosomal protein L22 TERM 380 392216 - 392200 - g 77 -3 -5.55698 | overlap 392191 GATAAGCTAAAAAAA GCCATT GAAAA AATGAC TTCTTTAAGTGAAGT rpsC 391927 - 392580 + | 30S ribosomal protein S3 rplP 392596 - 393006 + | 50S ribosomal protein L16 rpmC 392999 - 393211 + | 50S ribosomal protein L29 rpsQ 393217 - 393450 + | 30S ribosomal protein S17 rplN 393522 - 393890 + | 50S ribosomal protein L14 rplE 393891 - 393989 + | 50S ribosomal protein L5 A1I_02095 394220 - 394759 + | 50S ribosomal protein L5 TERM 381 394875 - 394865 - g 72 -2.6 -5.47846 | AATTAAAAAATAAAA TTTA CGA TAAA AATATTTCATTAGAA rpsN 394774 - 395079 + | 30S ribosomal protein S14 rpsH 395099 - 395497 + | 30S ribosomal protein S8 rplF 395507 - 396040 + | 50S ribosomal protein L6 rplR 396055 - 396411 + | 50S ribosomal protein L18 rpsE 396545 - 396958 + | 30S ribosomal protein S5 rpmD 396984 - 397181 + | 50S ribosomal protein L30 rplO 397195 - 397653 + | 50S ribosomal protein L15 TERM 382 398342 - 398373 + G 85 -10.4 -3.3941 | opp_overlap 398342 398345, overlap 398345 TATTAATATCTATAA TAATTTTCTTTGAG AAAG CACAAAGAAAATTA TTAGTTCAGTATCCT TERM 383 398373 - 398342 - g 85 -10.4 -3.43217 | opp_overlap 398342 398345, overlap 398345 TATTAATATCTATAA TAATTTTCTTTGAG AAAG CACAAAGAAAATTA TTAGTTCAGTATCCT TERM 384 398345 - 398370 + G 74 -7.7 -3.83006 | opp_overlap 398342 398345, overlap 398342 TAATATCTATAATAA TTTTCTTTGAG AAAG CACAAAGAAAA TTATTAGTTCAGTAT TERM 385 398370 - 398345 - g 74 -7.7 -3.84639 | opp_overlap 398345 398342, overlap 398342 TAATATCTATAATAA TTTTCTTTGAG AAAG CACAAAGAAAA TTATTAGTTCAGTAT TERM 386 398603 - 398613 + G 77 -4 -5.32608 | TATTATTGTATGTAG CATT GAT AATG TTTTTTAGCTTTTTT secY 397657 - 398958 + | preprotein translocase subunit SecY TERM 387 399208 - 399181 - f 77 -5.8 -4.96646 | opp_overlap 399175 399180, overlap 399175 TCATATAATTAAAAA TTTTTTATCATC TTCT GATTATAAAAAA GGTTATATATTAGAT rpsM 399670 - 400047 + | 30S ribosomal protein S13 A1I_02155 400072 - 400455 + | 30S ribosomal protein S11 TERM 388 400771 - 400761 - g 71 -5.4 -4.65153 | opp_overlap 400763, overlap 400763 GCATAGAAATCAAAA TGCA CGT TGCA GAAAAACGTGTTATA TERM 389 400812 - 400796 - g 74 -6.5 -4.46656 | GTTATAAGATTAAAA GCAACAG GAC CTGGTGC TATAACGGCTGGTAT A1I_02160 400472 - 401497 + | DNA-directed RNA polymerase subunit alpha rplQ 401509 - 401937 + | 50S ribosomal protein L17 TERM 390 402038 - 402025 - g 70 -3.9 -5.08601 | opp_overlap 402025 CTAGTGCAATAAAAA CTTTT GTGA AAAAG GTTTTACATGAAATT rpsT 401937 - 402200 + | 30S ribosomal protein S20 TERM 391 402476 - 402504 + TF 86 -6.1 -5.38054 | opp_overlap 402475 402476 TTCCCTCAATAAAAT GGAGGAACTAT GAATAAA ATAGTTGCTCC TTTTTCTTTGTCAGA A1I_02190 406049 - 404859 - | MFS-type transporter A1I_02185 404366 - 404938 + | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 392 406927 - 406911 - g 71 -5.2 -4.57353 | GTTGAGCAGAGAAAA CTTGAT TTATT ATCAAG AAAAGCCTCGAACTT TERM 393 407328 - 407315 - g 74 -3.9 -5.28778 | ACCAGGTATAAAAAA CTTTT CAGA AAAAG AAATTTTAGATTTAT A1I_02195 406353 - 408029 + | hypothetical protein A1I_02200 408200 - 407988 - | hypothetical protein TERM 394 409490 - 409468 - RH 79 -7.8 -4.22346 | opp_overlap 409468 409473 GAAATTGATGTAAAA GGTAATGTAA CAG TTACATTTCC TGATATCGTATTATT TERM 395 410861 - 410905 + rH 77 -8.2 -3.85389 | gap 1, opp_overlap 410858 410861, overlap 410858 GGATTAGAAGAATTA TTGGAACCAATAATCATCTAT CATA ATAGC-GATTATTCGTTCCAA TTTCAATTATTGCAA TERM 396 410905 - 410861 - RH 79 -10.4 -3.00003 | gap 1, opp_overlap 410858 410861, overlap 410858 GGATTAGAAGAATTA TTGGAACCAATAATCATCTAT CATA ATAG-CGATTATTCGTTCCAA TTTCAATTATTGCAA A1I_02215 412381 - 412190 - | hypothetical protein A1I_02220 412374 - 412625 + | hypothetical protein TERM 397 412632 - 412672 + Tr 79 -7.7 -4.25566 | opp_overlap 412644 412647, overlap 412631 412633 GTGATGTAAGCTTCT TCTCTTTGGAAAGGAGTAT TTT ATACTTCTCTCCAAAAAGC TTTTAAATACTTGTT TERM 398 412633 - 412671 + Tr 91 -11.2 -3.14255 | opp_overlap 412644 412647, overlap 412631 412632 TGATGTAAGCTTCTT CTCTTTGGAAAGGAGTAT TTT ATACTTCTCTCCAAAAAG CTTTTAAATACTTGT A1I_02225 413680 - 412715 - | leucine-rich repeat-containing protein TERM 399 412960 - 412972 + g 74 -4.1 -5.28826 | AACATTCTTTTAACA GTTTC TTA GGAAC TTTTTTATAAAATTT TERM 400 413504 - 413528 + g 84 -10.9 -3.13432 | TATTATTGTTTTTTC TCTCTCTAATG TGT TATTAGAGAGA TTAAGTACTCTTAAA A1I_02230 414132 - 413707 - | leucine-rich repeat-containing protein A1I_02235 414868 - 414425 - | hypothetical protein TERM 401 414829 - 414842 + g 70 -3.9 -5.02421 | ACCCTGCACATATAC TACAA TATC TTGTA TTTATTTTTGGTTTT TERM 402 415873 - 415887 + G 72 -5.7 -4.49314 | CTTCAATCGCCTTAC GGCTA CCCTA TAGCC TTGTTTTTAATGGTC A1I_02240 414994 - 415953 + | magnesium/cobalt transporter CorA TERM 403 416003 - 415961 - T 71 -4.5 -4.72201 | gap 1, overlap 415963 415964 GGTTATAAAAAATAA TATTTGTGACTATTATAACA TGCT CGTTATAATAGTCA-AACCA AACTCTCATATATTT A1I_02245 417115 - 416009 - | rod shape-determining protein rodA TERM 404 416317 - 416303 - G 76 -6.4 -4.59109 | overlap 416293 CATACCGCCTAAAAA GCCGAA TTC TTCAGC AAAAGTAGCAAAAAT TERM 405 416415 - 416405 - G 73 -4.6 -5.09426 | CCCAAGCCCAAAAAA GCCC CCT GAGC CTATAGCGATTTTAG A1I_02250 417785 - 417108 - | ankyrin repeat-containing protein TERM 406 417959 - 417935 - R 74 -8.6 -3.33162 | overlap 417937 417949 CATTCTATGGCACAA GATCCCGTGA TCAAG TCACGGGATG ACAATATAATTGATT TERM 407 417957 - 417937 - R 93 -11.2 -3.23393 | overlap 417935 417949 TTCTATGGCACAAGA TCCCGTGA TCAAG TCACGGGA TGACAATATAATTGA A1I_02255 420036 - 418012 - | protease II TERM 408 419987 - 420004 + g 81 -2.1 -6.02919 | GGATCACGCAGCCAG TGATAAT CGTC ATTATTA TTTTTTTGTTTGTCG A1I_02270 422044 - 421640 - | toxin of toxin-antitoxin (TA) system VapC A1I_02275 422322 - 422035 - | antitoxin of toxin-antitoxin (TA) system VapB A1I_02280 423829 - 422420 - | guanosine pentaphosphate phosphohydrolase TERM 409 423865 - 423887 + r 73 -8.6 -3.17608 | opp_overlap 423865 423864 423867, overlap 423864 423880 TTTTAAGAGTAGAAT TATACTCAAA TCA TTTGGGTATA TATTACTCACTGTTT A1I_02285 425668 - 423890 - | hypothetical protein A1I_02290 426805 - 425801 - | hypothetical protein A1I_02295 428235 - 426802 - | VirB10 TERM 410 428265 - 428289 + r 88 -8.6 -4.3739 | overlap 428267 ATAGTTATTTATTGT CATCCTGCGA CTTGA TCGCAGGATC TTTTGTCACAAGCTA TERM 411 428267 - 428287 + r 95 -11.2 -3.79419 | overlap 428265 AGTTATTTATTGTCA TCCTGCGA CTTGA TCGCAGGA TCTTTTGTCACAAGC A1I_02300 428827 - 428342 - | VirB9 A1I_02305 429533 - 428814 - | VirB8 TERM 412 429124 - 429104 - G 93 -7 -5.39755 | opp_overlap 429104 GATAACCATAAAAAA GATTACTT GTTGA AAGTAATC TTATAGTAGTGCGTG TERM 413 429386 - 429359 - G 95 -8.8 -4.93898 | opp_overlap 429359 429363 429366, overlap 429378 ATATTATCATAAAAA TTAATAATATTA TCAG TAATATTATTAA TAAGTTACGTTGAAC A1I_02310 429769 - 429587 - | hypothetical protein TERM 414 429908 - 429926 + H 72 -7.6 -3.67564 | opp_overlap 429908 429911, overlap 429911 AGTGTTATATAACAA TAATATTG ATA CAATATTA TTTCCATCAATAATT TERM 415 429926 - 429908 - H 76 -7.6 -3.885 | opp_overlap 429908 429911, overlap 429911 AGTGTTATATAACAA TAATATTG ATA CAATATTA TTTCCATCAATAATT TERM 416 431439 - 431455 + G 72 -7.3 -3.80858 | ATTTTTGCTGTAGAT GATTCAC TGC GTGAGTC TTTAGTAAATTATCG A1I_02325 430935 - 431585 + | VirB9 TERM 417 431589 - 431620 + F 84 -9.5 -3.7331 | gap 1, overlap 431587 AGAGCATACTGAGTT CTGTCATCCCGTGG CTTGA CCACGGGATC-CAG TCTTTTAATCAAAAT A1I_02330 431677 - 432012 + | putative monovalent cation/H+ antiporter subunit C TERM 418 432072 - 432102 + T 84 -8.6 -4.33785 | opp_overlap 432079, overlap 432079 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 419 432079 - 432095 + T 95 -6.7 -5.77677 | opp_overlap 432079, overlap 432072 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 420 432095 - 432079 - T 78 -6.7 -4.67353 | opp_overlap 432079 432072 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_02335 432293 - 432090 - | putative monovalent cation/H+ antiporter subunit D A1I_02340 432346 - 433458 + | putative monovalent cation/H+ antiporter subunit D TERM 421 433778 - 433797 + F 75 -9.4 -3.01924 | opp_overlap 433769 433767 433778 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 422 433797 - 433778 - f 76 -9.4 -3.06087 | opp_overlap 433778, overlap 433769 433767 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_02345 433955 - 434779 + | transposase A1I_02350 434746 - 434910 + | transposase TERM 423 436082 - 436094 + G 72 -4.9 -4.91046 | CATTTAGTATCGCAT TCTTT TAC AAAGA TTTGTTTATTTTATA A1I_02355 435050 - 436513 + | putative monovalent cation/H+ antiporter subunit D A1I_02360 437577 - 436516 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase A1I_02365 438686 - 437784 - | hypothetical protein TERM 424 438617 - 438603 - GR 71 -8.6 -2.77355 | overlap 438602 TTCAAATAACAATAC GCTGAT AAT ATCAGC TGGGTGCATACTAGC A1I_02370 438867 - 438652 - | hypothetical protein A1I_02375 440478 - 439342 - | ankyrin repeat-containing protein TERM 425 439508 - 439496 - G 79 -3.5 -5.55664 | GCAGCAGTAAAAAAA TTATT TTT AATAA AGTCTTCTATTGTAT A1I_02380 440591 - 440487 - | hypothetical protein A1I_02385 441025 - 441195 + | hypothetical protein TERM 426 441256 - 441228 - f 93 -11.8 -3.08133 | GATCCACGCAGGCAA TGCATCCCGTGA TTTAT TCACGGGATTCA AAAAAACAACTTTTA A1I_02390 441349 - 441513 + | cassette chromosome recombinase B A1I_02395 441836 - 441624 - | hypothetical protein A1I_02400 442873 - 442019 - | protein export protein prsA precursor TERM 427 444718 - 444707 - g 73 -4.4 -5.09762 | AGCTGAAGAGAAAAA GCAA GTAA TTGC AGCAGGCGGGTTATT A1I_02405 443091 - 445823 + | preprotein translocase subunit SecA TERM 428 445876 - 445905 + T 71 -7.2 -3.70853 | gap 1 TGGATCATTTTCCCC TGTCATCCCGTGA ATAAA TCACGGGAAG-CA TTGTTGCGTGATTCC TERM 429 445976 - 445962 - T 85 -2.9 -5.84381 | CCAGGAATAAAAAAA CTTAA ATACG TTAAG CCTCTAGCACTAAAA TERM 430 446565 - 446584 + T 73 -5.8 -4.61482 | overlap 446571 ATAGTTTTAATTCTT TAGCTCTA ATAA TAGAGTTA TTATTTTTTCGAGCA A1I_02410 447051 - 446542 - | hypothetical protein TERM 431 447498 - 447534 + H 100 -12.7 -5.29782 | opp_overlap 447508 TTTATTCACGGGATC CAGTTAAAAATATCAAT AAC ATTGATATTTTTAGTTG TTTTTTCTGGATCTA TERM 432 447524 - 447508 - H 78 -6.7 -4.67353 | opp_overlap 447498 GGATCCAGTTAAAAA TATCAAT AAC ATTGATA TTTTTAGTTGTTTTT TERM 433 447668 - 447635 - H 75 -4.2 -5.31456 | gap 1, opp_overlap 447638 447646, overlap 447638 447645 GCAATCCAGAAAAAA TAATAAAAAACGCTA TAAAT TAGCATTTTTTA-TA CTTCCTTGCTTCGTC TERM 434 447666 - 447638 - H 87 -8.4 -4.73105 | opp_overlap 447638 447646, overlap 447635 447645 ATCCAGAAAAAATAA TAAAAAACGCTA TAAAT TAGCATTTTTTA TACTTCCTTGCTTCG TERM 435 447659 - 447645 - H 80 -2.1 -5.80727 | opp_overlap 447638 447646, overlap 447638 447635 AAAAATAATAAAAAA CGCTA TAAAT TAGCA TTTTTTATACTTCCT A1I_02415 448086 - 449411 + | leucine-rich repeat-containing ribonuclease inhibitor A1I_02420 450303 - 449554 - | putative glutamine amidotransferase TERM 436 450281 - 450291 + g 71 -5.4 -4.73094 | opp_overlap 450270, overlap 450272 AAATCAGGAGTAATT CCTA TTA TAGG TTTTCTATTCATATT A1I_02425 450830 - 450309 - | 5-formyltetrahydrofolate cyclo-ligase A1I_02430 451204 - 450830 - | RDD family protein TERM 437 450972 - 451024 + g 70 -3.8 -5.03314 | gap 1, opp_overlap 450987, overlap 450975 450980 450987 AATCTAATAAATGCT TCACTACCTTTAAGAGTAGTTCCAT CTTG AT-GAACTACTTTTAAATCTAGTAA TTTTTTCCCAATAGA A1I_02435 452806 - 451208 - | cytochrome c oxidase polypeptide I TERM 438 452163 - 452137 - G 73 -8 -3.40022 | TAAGTAACATAGTAA TAGCTCCGCCAA GCA CTGGCATAGCTA AAATTATCAAGAATG A1I_02440 453759 - 452857 - | hypothetical protein TERM 439 453398 - 453383 - G 72 -4.8 -4.81852 | TTATAAGTAACAAAA TCAATA TCAT TATTGA AACATGTCAAGTAAA A1I_02445 453887 - 453753 - | hypothetical protein TERM 440 454054 - 454030 - R 77 -8.6 -3.54951 | overlap 454032 454044 CATTCTATGACACAA GATCCCGTGA TAAAG TCACGGGATG ACAATATAATTGACT TERM 441 454052 - 454032 - R 93 -11.2 -3.34902 | overlap 454030 454044 TTCTATGACACAAGA TCCCGTGA TAAAG TCACGGGA TGACAATATAATTGA A1I_02450 454967 - 454167 - | cytochrome c oxidase polypeptide II A1I_02455 455607 - 455053 - | glycerol-3-phosphate cytidyltransferase TagD TERM 442 455677 - 455687 + H 76 -2.6 -5.59534 | opp_overlap 455657 455677, overlap 455657 CGATTTAAAACTAAA TTAT TTT ATAA TTTTTTATTGTAATT A1I_02460 455760 - 457127 + | membrane-bound metallopeptidase TERM 443 457545 - 457559 + G 76 -8.6 -3.37773 | overlap 457544 457541 GATGGAAGCCTGGCT TGACCT TAA AGGTCA CTTCTTTTTTAAATA lspA 457418 - 458008 + | lipoprotein signal peptidase A1I_02470 458034 - 458282 + | hypothetical protein A1I_02475 458319 - 459443 + | cytosine-C5 specific DNA methylase A1I_02480 459430 - 460038 + | hypothetical protein TERM 444 460561 - 460575 + G 72 -8.6 -2.98778 | overlap 460558 TAGTGAAAACTTTTG CTGCTA AAA TAGCAG TGCTTCTTAATATTA murD 460056 - 461408 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase A1I_02490 461563 - 461976 + | hypothetical protein TERM 445 462072 - 462116 + F 78 -10.3 -2.55545 | opp_overlap 462104, overlap 462071 462069 TGTGAGGAGAGGTTT CGATTTGGTAATCTTATGAAA ATG TCTTATAAGATTGCTGAATCG CTATGTTCTTAGCAA TERM 446 463005 - 462993 - g 80 -7.7 -4.2558 | GAGGGGGCAGTAAAA CAGGT TCT ACCTG ATTCACATACTGATT A1I_02495 462231 - 463364 + | cell division protein ftsW TERM 447 463653 - 463673 + G 83 -6.9 -4.84359 | GTGGTTATCCGGTTG TTGCTTCAA TGT TTGCAGCAA TTTTTCTAAGAGTGC murG 463361 - 464431 + | N-acetylglucosaminyl transferase TERM 448 464610 - 464631 + G 77 -8.8 -3.62478 | TTTAGGTGTTTTTGT GCTATCAG GTTGTA CTGATAGC TTTAGAGGTTACTTC A1I_02505 464569 - 465213 + | hypothetical protein A1I_02510 466210 - 465464 - | hypothetical protein TERM 449 466153 - 466137 - G 76 -9.4 -3.13772 | opp_overlap 466137, overlap 466135 466134 ATTTTAGGAAAAGCA GGGGAG GTTAG CTCCCC TTTGAAAGCTATCAG TERM 450 466137 - 466153 + g 80 -9.4 -3.56643 | opp_overlap 466137 466135 466134 ATTTTAGGAAAAGCA GGGGAG GTTAG CTCCCC TTTGAAAGCTATCAG A1I_02515 466401 - 466210 - | hypothetical protein A1I_02520 466619 - 467584 + | ABC-type transport system, periplasmic component A1I_02525 467589 - 468428 + | ABC transporter permease protein A1I_02530 468425 - 469153 + | ABC transporter ATP-binding protein A1I_02535 469487 - 469305 - | hypothetical protein A1I_02540 470041 - 469568 - | disulfide bond formation protein DsbB TERM 451 470152 - 470180 + H 100 -19 -2.53392 | AGGCATTGCACACTT GTCATCCCGTGG ACAAG CCACGGGATGAC TACCTTAGGACGTTT lysK 470337 - 471905 + | lysyl-tRNA synthetase A1I_02550 472109 - 473041 + | putative permease A1I_02555 473174 - 475471 + | malic enzyme A1I_02560 475507 - 477483 + | Sec7 domain-containing protein TERM 452 477908 - 477894 - T 71 -7.2 -3.79906 | TCATTGCGAGAAGAA GAAACT GAA AGTTTC GACGAAGCAATCTCA TERM 453 478081 - 478045 - T 90 -7.6 -5.31456 | opp_overlap 478047 478048 478056, overlap 478048 478056 GCAATCCAGAAAAAA TAATAAAAAAATGCTA TAAGT TAGCATTTTTTTACTT CCTTGCTTCGTTAAT TERM 454 478047 - 478079 + T 71 -8 -3.47896 | opp_overlap 478045 478048 478056, overlap 478048 478056 AATCCAGAAAAAATA ATAAAAAAATGCTA TAAGT TAGCATTTTTTTAC TTCCTTGCTTCGTTA TERM 455 478078 - 478048 - T 100 -11.5 -4.73105 | opp_overlap 478047 478048 478056, overlap 478045 478056 ATCCAGAAAAAATAA TAAAAAAATGCTA TAAGT TAGCATTTTTTTA CTTCCTTGCTTCGTT TERM 456 478048 - 478078 + T 85 -11.5 -2.68014 | opp_overlap 478048 478045 478056, overlap 478047 478056 ATCCAGAAAAAATAA TAAAAAAATGCTA TAAGT TAGCATTTTTTTA CTTCCTTGCTTCGTT TERM 457 478056 - 478070 + T 88 -4.3 -5.66868 | opp_overlap 478056 478048 478045, overlap 478048 478047 AAAATAATAAAAAAA TGCTA TAAGT TAGCA TTTTTTTACTTCCTT TERM 458 478070 - 478056 - T 91 -4.3 -6.04419 | opp_overlap 478048 478047 478056, overlap 478048 478045 AAAATAATAAAAAAA TGCTA TAAGT TAGCA TTTTTTTACTTCCTT rnpA 478593 - 478231 - | ribonuclease P rplT 478749 - 478615 - | 50S ribosomal protein L34 TERM 459 478880 - 478866 - R 76 -10 -2.63301 | GAGATTGCCACAGCA GCGAAG TGG CTTCGC AATGACGTTGTCTAT A1I_02575 479250 - 478897 - | 50S ribosomal protein L20 rpmI 479472 - 479266 - | 50S ribosomal protein L35 A1I_02585 479651 - 480328 + | organic radical activating protein A1I_02590 480403 - 481011 + | 50S ribosomal protein L25/general stress protein Ctc TERM 460 481179 - 481155 - f 74 -8.6 -3.33162 | overlap 481157 481169 CATTCTATGGCACAA GATCCCGTGA TCAAG TCACGGGATG ACAATATAATTGACT TERM 461 481177 - 481157 - f 93 -11.2 -3.23393 | overlap 481155 481169 TTCTATGGCACAAGA TCCCGTGA TCAAG TCACGGGA TGACAATATAATTGA TERM 462 481263 - 481293 + F 84 -8.6 -4.33785 | opp_overlap 481263 481270, overlap 481270 CTCCAAGGTATCAAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 463 481293 - 481263 - f 70 -8.6 -2.52933 | opp_overlap 481263 481270, overlap 481270 CTCCAAGGTATCAAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 464 481286 - 481270 - f 80 -6.7 -4.7629 | opp_overlap 481263 481270, overlap 481263 GTATCAAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 465 481270 - 481286 + F 95 -6.7 -5.77677 | opp_overlap 481270 481263, overlap 481263 GTATCAAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 466 481624 - 481612 - g 75 -2.7 -5.64421 | AGTGTAAAGAAAAAA TTCCA TTG TGAAA TTGCTGAAAGTACTA A1I_02595 481486 - 482043 + | peptidyl-tRNA hydrolase TERM 467 482050 - 482090 + F 83 -10.6 -3.29511 | gap 2, overlap 482051 ATGGTTTAGGTATCG CTCC--TGTCATCCCGTGGT CAA GCCACGGGATGACACTGGAA TTATAAAACAATACC TERM 468 482051 - 482089 + F 100 -14.1 -2.57564 | gap 2, overlap 482050 TGGTTTAGGTATCGC TCC--TGTCATCCCGTGGT CAA GCCACGGGATGACACTGGA ATTATAAAACAATAC TERM 469 482249 - 482259 + G 77 -4 -5.40464 | AAAGGTTTAACGGGT GATT TAA AATC TTTTTCTTTCTCATG A1I_02600 482138 - 482566 + | acetyltransferase TERM 470 483333 - 483322 - f 75 -4.4 -5.33131 | TAAGAAAAAAATAAA GGAA TTAT TTCC GTATAACCCTCTTGA A1I_02620 485205 - 486302 + | translation-associated GTPase A1I_02625 486775 - 487989 + | MFS-type bicyclomycin resistance protein A1I_02630 487986 - 488132 + | hypothetical protein TERM 471 488270 - 488306 + T 100 -17.1 -4.45485 | opp_overlap 488273 488280, overlap 488280 TTTATTCACGGGATC CAATTAAAAATATCAAT AAC ATTGATATTTTTAATTG TTTTCTGGATCTAGT TERM 472 488303 - 488273 - T 100 -13 -3.06915 | opp_overlap 488270 488280, overlap 488280 ATTCACGGGATCCAA TTAAAAATATCAAT AAC ATTGATATTTTTAA TTGTTTTCTGGATCT TERM 473 488280 - 488296 + T 83 -6.7 -5.07971 | opp_overlap 488280 488273, overlap 488270 GGATCCAATTAAAAA TATCAAT AAC ATTGATA TTTTTAATTGTTTTC TERM 474 488296 - 488280 - T 82 -6.7 -4.88407 | opp_overlap 488270 488280, overlap 488273 GGATCCAATTAAAAA TATCAAT AAC ATTGATA TTTTTAATTGTTTTC TERM 475 488446 - 488412 - T 84 -6.7 -5.31456 | opp_overlap 488414 488422, overlap 488415 488422 GTAATCCAGAAAAAA TAATAAAAAATGCTA TAAAT TAGCATTTTTTACTG GATTGCTTCGTCAGG TERM 476 488443 - 488415 - T 100 -10.6 -4.73105 | opp_overlap 488414 488422, overlap 488412 488422 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA CTGGATTGCTTCGTC TERM 477 488436 - 488422 - T 88 -4.3 -5.80727 | opp_overlap 488414 488422, overlap 488415 488412 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTACTGGATTG TERM 478 488422 - 488436 + T 75 -4.3 -5.18357 | opp_overlap 488422 488415 488412, overlap 488414 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTACTGGATTG A1I_02635 489054 - 488827 - | Actin polymerization protein RickA A1I_02640 489727 - 489227 - | Actin polymerization protein RickA TERM 479 489262 - 489272 + g 80 -5.4 -5.19275 | CTTTTACGTTTATAT GCTT TTG AAGC TTTTCTTTTATCGCT A1I_02645 490146 - 489958 - | Actin polymerization protein RickA mraY 491326 - 490241 - | phospho-N-acetylmuramoyl-pentapeptide-transferase A1I_02655 492711 - 491359 - | UDP-N-acetylmuramoylalanyl-D-glutamyl- 2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 480 492788 - 492812 + r 76 -8.6 -3.494 | overlap 492786 492790 CAGATTTTTAGCTGT CATCCCGTGA CTTGA TCACGGGATC TTGTATCACAGATTG TERM 481 492790 - 492810 + r 93 -11.2 -3.31905 | overlap 492786 492788 GATTTTTAGCTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTATCACAGAT TERM 482 492829 - 492866 + r 87 -8.5 -4.77157 | gap 1, opp_overlap 492840, overlap 492832 TGTATCACAGATTGT GTCCTGAGATACTGCGGT CAA GCCGCAGTATGACAG-AC TTTTTACTGGATTCC TERM 483 492832 - 492864 + r 85 -11.3 -2.6662 | opp_overlap 492840, overlap 492829 ATCACAGATTGTGTC CTGAGATACTGCGGT CAA GCCGCAGTATGACAG ACTTTTTACTGGATT TERM 484 492856 - 492840 - R 74 -9.4 -2.87132 | opp_overlap 492832 492829 TTGTGTCCTGAGATA CTGCGG TCAAG CCGCAG TATGACAGACTTTTT murE 494294 - 492870 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 485 493348 - 493367 + g 76 -9.4 -3.01199 | overlap 493347 493362 ATTCGTCCTTTTACG GCTTTAAC TTTA GTTAAAGC ATTTATAACTTTACT TERM 486 494220 - 494208 - G 79 -4.8 -5.27779 | opp_overlap 494208 TTTAATAGCAAAAAA GGCA TCGTT TGCC TTAATAGTTTTAGAA TERM 487 494322 - 494371 + r 100 -16 -4.37886 | gap 1, opp_overlap 494332, overlap 494325 494325 AATTATGATGTTGTT TCCGTATAGATGTCATCCCGTGG ACAAG CCACGGGATGACATCTAAA-GCA TTTTCTGAGCCATGC TERM 488 494325 - 494370 + r 100 -18.6 -3.2241 | gap 1, opp_overlap 494332, overlap 494325 494322 TATGATGTTGTTTCC G-TATAGATGTCATCCCGTGG ACAAG CCACGGGATGACATCTAAAGC ATTTTCTGAGCCATG TERM 489 494325 - 494369 + r 100 -18.8 -2.53125 | opp_overlap 494332, overlap 494322 494325 TATGATGTTGTTTCC GTATAGATGTCATCCCGTGG ACAAG CCACGGGATGACATCTAAAG CATTTTCTGAGCCAT TERM 490 494362 - 494332 - R 100 -19.9 -2.87132 | opp_overlap 494325 494325 494322 TTGTTTCCGTATAGA TGTCATCCCGTGG ACAAG CCACGGGATGACA TCTAAAGCATTTTCT A1I_02665 497779 - 494417 - | transcription-repair coupling factor A1I_02670 498056 - 497793 - | TPR repeat-containing protein TERM 491 498022 - 498036 + g 76 -3.6 -5.41941 | overlap 498023 CTACGATAAAAAAGT TTCTTT TGT AAAGAG TTTTTATTTAATTTA TERM 492 498461 - 498479 + G 81 -3.2 -5.72616 | ATCTATTATTGATGA TAAAATGT CTA ACATTATA TTTTTTTATGTAGAT A1I_02675 498243 - 498512 + | rhodanese-related sulfurtransferase A1I_02680 498512 - 498631 + | rhodanese-related sulfurtransferase dnaA 498632 - 500023 + | chromosomal replication initiation protein A1I_02690 500470 - 500772 + | hypothetical protein A1I_02695 502060 - 500759 - | hypothetical protein A1I_02700 502658 - 502041 - | hypothetical protein A1I_02705 502986 - 502672 - | hypothetical protein A1I_02710 503170 - 504684 + | patatin-like phospholipase TERM 493 504989 - 504973 - T 80 -2.3 -5.77677 | opp_overlap 504973, overlap 504966 GAAAATAATAAAAAA TACTAAT TTT ATGAGTA TTTTTAACTGGCTCT rpsD 506009 - 505392 - | 30S ribosomal protein S4 TERM 494 506955 - 506971 + G 79 -8.1 -4.02733 | opp_overlap 506954 GCTGATAATAAGCAG GCAAAAA GAT TTTTTGC TTATTCTATATTTTA A1I_02720 506127 - 507029 + | protoheme IX farnesyltransferase TERM 495 507123 - 507093 - f 81 -9.9 -3.53307 | opp_overlap 507085 AATAAGCCTATATAA TGCCCTTTTAAAA TCATT TTTTATAAGGGCA GTAATGGTTAATACA A1I_02725 507127 - 507879 + | hypothetical protein A1I_02730 510458 - 507933 - | Outer membrane assembly protein TERM 496 508578 - 508594 + g 74 -3 -5.45802 | TTCGGTGGTAAAATT TAATCG TCCAT CGGTTA TTTTTATTTTACCAC TERM 497 508793 - 508807 + g 77 -8.6 -3.68084 | overlap 508786 508789 TAAAATTATTTATTA CCAATG AAT CATTGG TTAGTTTATCTATAT A1I_02735 510989 - 510486 - | small heat shock protein TERM 498 511288 - 511259 - R 87 -10.9 -3.39717 | opp_overlap 511259 511261 511268, overlap 511261 511268 ATGGATGAATATTAA TAGAGATAAGGTT TAAA AACCTTATCTCTG TTAGATATTACTCGG TERM 499 511259 - 511288 + r 100 -13.1 -3.20348 | opp_overlap 511259 511261 511268, overlap 511261 511268 ATGGATGAATATTAA TAGAGATAAGGTT TAAA AACCTTATCTCTG TTAGATATTACTCGG TERM 500 511286 - 511261 - R 100 -13.5 -3.26531 | opp_overlap 511259 511261 511268, overlap 511259 511268 GGATGAATATTAATA GAGATAAGGTT TAAA AACCTTATCTC TGTTAGATATTACTC TERM 501 511261 - 511286 + r 100 -13.5 -3.16217 | opp_overlap 511261 511259 511268, overlap 511259 511268 GGATGAATATTAATA GAGATAAGGTT TAAA AACCTTATCTC TGTTAGATATTACTC A1I_02740 512867 - 511296 - | hypothetical protein TERM 502 512138 - 512158 + g 79 -8.5 -3.82764 | overlap 512147 AGCTATGATAATGTT CATTTAATA CAA TATTAAATG TTGATTTTAATTTTT A1I_02745 513430 - 512972 - | hypothetical protein TERM 503 513644 - 513666 + H 72 -5 -4.72617 | opp_overlap 513647, overlap 513647 ACTAGAGCCAGTTAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 504 513663 - 513647 - H 78 -6.7 -4.67755 | opp_overlap 513644 513647 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 505 513647 - 513663 + H 76 -6.7 -4.42118 | opp_overlap 513647, overlap 513644 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 506 513774 - 513793 + H 75 -9.4 -3.01924 | opp_overlap 513774 513765 513763 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 507 513793 - 513774 - H 76 -9.4 -3.06087 | opp_overlap 513774, overlap 513765 513763 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_02750 513951 - 514910 + | transposase A1I_02755 514983 - 515588 + | hypothetical protein TERM 508 515644 - 515672 + T 74 -6.2 -4.38744 | opp_overlap 515644 515651, overlap 515651 GAAAATGTTGAAGTA TAAAAAATGCTA ATTTA TAGCATTTTCTA TTATTTTCTCTGGAT TERM 509 515651 - 515665 + T 70 -4.3 -4.88288 | opp_overlap 515651 515644, overlap 515644 TTGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTCTATTATTTTC TERM 510 515665 - 515651 - T 78 -4.3 -5.37345 | opp_overlap 515644 515651, overlap 515644 TTGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTCTATTATTTTC A1I_02760 517851 - 515749 - | hypothetical protein TERM 511 515994 - 516006 + g 77 -4.1 -5.41746 | overlap 515982 TTCCACCTTTACTAT GGTGT AAT ATACC TTTTTTTAGAGCGTT TERM 512 517696 - 517708 + g 82 -7.7 -4.45083 | ATTAACTATTTCCAC TGCTG CAT CAGCA TTTTCTACATATAAA A1I_02765 518040 - 518795 + | cephalosporin hydroxylase A1I_02770 518804 - 519757 + | cephalosporin hydroxylase A1I_02775 520702 - 520268 - | hypothetical protein A1I_02780 521145 - 520813 - | hypothetical protein A1I_02785 522249 - 521419 - | hypothetical protein A1I_02790 522502 - 522242 - | antitoxin of toxin-antitoxin (TA) system Phd A1I_02795 522912 - 522547 - | alkylated DNA repair protein A1I_02800 523556 - 522909 - | hexapaptide repeat-containing transferase A1I_02805 524043 - 523543 - | putative transcription activator A1I_02810 524116 - 524562 + | hypothetical protein A1I_02815 524567 - 525052 + | MazG-like protein A1I_02820 525114 - 525305 + | hypothetical protein A1I_02825 526377 - 525676 - | ankyrin repeat-containing protein A1I_02830 526783 - 526364 - | ADP-ribose pyrophosphatase MutT TERM 513 526498 - 526516 + g 71 -7.5 -3.53811 | opp_overlap 526497 AGTTTTGTAATTCAT GCTCATT CAAAC AATGAGC TTTAAGGAAAATCGA A1I_02835 526938 - 526798 - | hypothetical protein A1I_02840 527210 - 526935 - | hypothetical protein A1I_02845 529022 - 527295 - | multidrug resistance protein TERM 514 528576 - 528564 - G 75 -4.9 -5.08011 | AAAACTTTCAAAAAA CATTA AAA TAATG CTACCGACTAACATC TERM 515 529149 - 529120 - R 77 -5.9 -4.87665 | overlap 529140 CGGGATCCAGAAAAA CAATAAAAAATAC TAAC GTATTTTTAACTG GACCCCGTGGTCAAG A1I_02850 529762 - 529445 - | hypothetical protein A1I_02855 529989 - 529759 - | hypothetical protein A1I_02860 530123 - 530476 + | HicB-like protein A1I_02865 530473 - 531150 + | trans-regulatory protein ExsB A1I_02870 531300 - 531851 + | ribosomal-protein-alanine acetyltransferase clpX 532179 - 533462 + | ATP-dependent protease ATP-binding subunit TERM 516 533529 - 533541 + T 84 -9.1 -3.82433 | opp_overlap 533527, overlap 533537 TTGCTTTATGAGATT GCCAC GTC GTGGC TTTGCTGCTCCTTGT A1I_02880 534893 - 533601 - | hypothetical protein TERM 517 533921 - 533937 + g 71 -2.3 -5.38958 | opp_overlap 533908 ATTCAAACAATAATT TGATAAT TTT AATATCA TTTTTATTTATAGCT A1I_02885 535212 - 534922 - | hypothetical protein TERM 518 535030 - 535058 + g 85 -8.3 -4.67353 | TAAACGATTTCTTTC TATATCCAAAAGA AAA TCTTCTGGATGTA TTTTTAAATGCCTAA A1I_02890 535595 - 536881 + | RmuC family protein TERM 519 537511 - 537500 - g 70 -4.4 -4.9138 | opp_overlap 537500 AGTACCTAAAGAAAA CACT AGAG AGTG GTTATCTGAATGCAA A1I_02895 537015 - 537845 + | Alpha-(1,3)-fucosyltransferase TERM 520 537860 - 537848 - g 76 -3.5 -5.36689 | opp_overlap 537857, overlap 537836 537852 537857 AAATGAAAAATAAAA TTTAT CAC ATAAA AAAGTATTTTTTTAT TERM 521 538491 - 538502 + G 73 -4.4 -5.01535 | opp_overlap 538491 538500, overlap 538500 TCTTAAAAAAATTAA TACC CAAA GGTA TTTTTATACTTCTAC A1I_02900 537835 - 538707 + | glycosyltransferase A1I_02905 540071 - 538794 - | Poly-beta-hydroxyalkanoate depolymerase TERM 522 539382 - 539396 + g 70 -7.2 -3.56972 | opp_overlap 539381 AAACCACTCCAAACT TTTGCT TAA AGCAAA TTCATTTACTGCGGT A1I_02920 543098 - 542352 - | LPS biosynthesis protein TERM 523 542644 - 542655 + gr 89 -3 -6.20267 | GTTTTTAAATTAGCA TGAA TAAA TTCA TTTTTTTCTTTTTGA valS 545508 - 543070 - | valyl-tRNA synthetase TERM 524 543664 - 543680 + gr 85 -3.7 -5.82172 | AGTAATTTTTTCTTT CACATCT ATA AGATTTG TTTTTTTATCTTCAT TERM 525 545444 - 545460 + gr 87 -3.7 -5.89947 | TAAATTTGCTTTTCT TGCCAAA TCT TTTGCCA TTTTTTTTCGCTTTC A1I_02930 546750 - 545875 - | transposase rnhB 547484 - 546894 - | ribonuclease HII hscB 547542 - 548042 + | co-chaperone HscB A1I_02955 549837 - 550172 + | ferredoxin TERM 526 551086 - 551073 - g 74 -6.7 -4.23647 | opp_overlap 551073 AAAGCAGTTAATAAA GCTTC CGAT GAAGC TGTAGTTAAAGAATC A1I_02960 550185 - 551255 + | hypothetical protein A1I_02965 551245 - 552216 + | TRAP-type uncharacterized transport system, periplasmic component A1I_02970 552247 - 552678 + | universal stress protein UspA-like nucleotide-binding protein TERM 527 552743 - 552715 - f 100 -12.1 -4.7497 | opp_overlap 552717 552719 TTCATTTACCAAAAA TATATTTTCTATT ATT AATAGAAAATATA GTTGACATTTTAGAA TERM 528 552717 - 552741 + F 78 -10.3 -2.78738 | opp_overlap 552715, overlap 552719 CATTTACCAAAAATA TATTTTCTATT ATT AATAGAAAATA TAGTTGACATTTTAG TERM 529 552784 - 552772 - f 72 -6.3 -4.22948 | AAAAGCTAGCTAAAA TCCTT TGC AAGGA TAGCAGTAATGCTAT A1I_02975 553565 - 554425 + | hypothetical protein A1I_02980 555915 - 554554 - | cytochrome d ubiquinol oxidase subunit I A1I_02985 556231 - 555959 - | hypothetical protein TERM 530 556849 - 556874 + G 74 -6.9 -4.21607 | opp_overlap 556849 ATTCTCCGCAAGCTA GCAATTATTGC TTTT GCACTAGTTGC TTTATATTCGGTACA TERM 531 557575 - 557595 + G 71 -8.3 -3.27246 | opp_overlap 557575 557577 557580, overlap 557574 TTAATTACCAGATTA CATGACATC GAA GATGGCATG ATTTTAATTGATGGT A1I_02990 556384 - 558153 + | multidrug ABC transporter ATP-binding protein TERM 532 558272 - 558220 - T 83 -8.7 -4.05788 | gap 1 GTTCGGTAAATGAAA TGAGCATGGCAATCTTATGAAACA GTATGA TACTCC-TGAGATTGCCACGCTCA CTCGCAAGGCATTGT TERM 533 558330 - 558346 + T 95 -6.7 -5.77677 | opp_overlap 558330 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 534 558346 - 558330 - T 83 -6.7 -5.09895 | opp_overlap 558330 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_02995 559703 - 558465 - | protease TERM 535 559743 - 559767 + r 81 -10 -3.48593 | overlap 559745 GTCATACAATATTGT CATCCCGTGG CTTGT CCACGGGATC TTGTATAACAAACTG TERM 536 559745 - 559765 + r 100 -12.6 -3.31726 | overlap 559743 CATACAATATTGTCA TCCCGTGG CTTGT CCACGGGA TCTTGTATAACAAAC A1I_03000 560613 - 559729 - | Beta 1,4 glucosyltransferase TERM 537 560165 - 560181 + g 79 -3.7 -5.55769 | opp_overlap 560165 GTGCTATTTATAGTA TTTGCAA AAC TAGCAAA TTTTTTATTATACAA A1I_03005 560876 - 560616 - | putative toxin of toxin-antitoxin (TA) system A1I_03010 561129 - 560887 - | antitoxin of toxin-antitoxin (TA) system StbD TERM 538 561838 - 561854 + H 73 -9.5 -2.53995 | opp_overlap 561835 561838 TAAGTTCTATAACCA GTTGCAA TTT TTGCAAC TAACTTAAGATGGCT TERM 539 561854 - 561838 - H 74 -9.5 -2.83747 | opp_overlap 561838, overlap 561835 TAAGTTCTATAACCA GTTGCAA TTT TTGCAAC TAACTTAAGATGGCT TERM 540 561867 - 561879 + H 71 -7.7 -3.50447 | opp_overlap 561866 AACTAACTTAAGATG GCTAG TTA CTAGC TTATGTGCAGCTTGC A1I_03025 562125 - 562667 + | cytochrome C oxidase assembly protein A1I_03030 562747 - 562989 + | transcriptional regulator A1I_03035 562973 - 563176 + | hypothetical protein A1I_03040 564383 - 563385 - | hypothetical protein TERM 541 563979 - 563994 + g 73 -4.6 -5.04356 | opp_overlap 563978 563980, overlap 563980 TAAATATACTATAAT AGCTCC CTCG GGAGCA TTTTTCATTGTTTCA TERM 542 563980 - 563993 + g 75 -8.1 -3.60987 | opp_overlap 563978 563980, overlap 563979 AAATATACTATAATA GCTCC CTCG GGAGC ATTTTTCATTGTTTC TERM 543 563993 - 563980 - G 71 -8.1 -3.33782 | opp_overlap 563980 563979, overlap 563978 AAATATACTATAATA GCTCC CTCG GGAGC ATTTTTCATTGTTTC trmU 564547 - 565650 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 544 565870 - 565900 + G 72 -9 -2.77222 | overlap 565869 TAAAAGAAATAGGTA GCTCGAGCGGTCTT AGT AAGACCCTTGGAGC ATTTGACCTAATACT A1I_03050 565821 - 567215 + | cationic amino acid transporter-1 TERM 545 567257 - 567279 + F 70 -5 -4.52873 | GTCCACGGGATCCAG TAAAAAATAC GTA GTATTTTTAA TTATTTTTCTGGACC TERM 546 567987 - 567977 - g 70 -4.6 -4.87893 | opp_overlap 567977 AAGGCTAACTAAAAA CCCG ATG CGGA TTCTTGATTCTAAAA hisS 567369 - 568616 + | histidyl-tRNA synthetase TERM 547 568791 - 568754 - f 85 -7.5 -4.89852 | gap 1, opp_overlap 568764, overlap 568764 CTAGATCCAGAAAAA TAAT-AAAAAATACTAAT TTT ATTAGTATTTTTTAACTA GATTGCACACGTACA TERM 548 568764 - 568780 + F 83 -6.7 -5.10497 | opp_overlap 568754 568764 AAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTTAACTAGATT TERM 549 568780 - 568764 - f 95 -6.7 -5.80727 | opp_overlap 568764, overlap 568754 AAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTTAACTAGATT TERM 550 568901 - 568916 + G 70 -4 -4.94972 | overlap 568902 AAGTAAAACCCTATA TTCTTC TGAA GAAGAG TTTTTACTTGTAATG A1I_03060 568860 - 569570 + | phosphoribosylaminoimidazole-succinocarboxamide synthase thrS 569584 - 571485 + | threonyl-tRNA synthetase TERM 551 571498 - 571518 + F 100 -12.6 -2.83894 | TAGATTTAGCTGTCA TCCCGTGG CTTGT CCACGGGA TCTAGTAATCGTCAT TERM 552 571860 - 571836 - g 70 -7.3 -3.61517 | opp_overlap 571836 ATTTCCTTTTAATAA TTCTTCAAAAT ATC ATCCTGAAGAA TTTATTGTTTCTGAG TERM 553 571983 - 571960 - g 71 -5.2 -4.71828 | overlap 571964 ACTTTACTAATAAAA GGACCTGCCT CTTC AGGCAAAACC TATCTAACCAAAATA TERM 554 572193 - 572179 - g 79 -7.2 -4.47456 | opp_overlap 572179 ACATCTAATAATAAA GGTAAA AAT TTTACC TTACCTGATCTATCA A1I_03070 571810 - 572472 + | hypothetical protein A1I_03075 572548 - 572787 + | MFS-type sugar transporter TERM 555 573218 - 573208 - g 70 -4 -4.99312 | AAGAGAAGAATAAAA TCTA GTC TAGA AAAAACCGGTTTAGA A1I_03080 572839 - 573861 + | MFS-type sugar transporter TERM 556 573918 - 573877 - f 71 -4.6 -4.77036 | opp_overlap 573877 573876, overlap 573880 GTTTAGTACTAAAAA TAAGTGATAAAGGTAAGA GGCAAT TTTTACCTTTATCACAGA ATTTATTTACCAACA TERM 557 573915 - 573880 - f 100 -10.7 -4.49314 | opp_overlap 573877 573876, overlap 573877 TAGTACTAAAAATAA GTGATAAAGGTAAGA GGCAAT TTTTACCTTTATCAC AGAATTTATTTACCA TERM 558 574282 - 574259 - g 75 -8.4 -3.65529 | ATATTTTTATCGAAA TTTATCAATA ATAA TATTGATAAA AAGGGTAGGGTATCA A1I_03085 574238 - 574690 + | cell division protein MraZ mraW 574690 - 575607 + | S-adenosyl-methyltransferase MraW A1I_03095 575610 - 576005 + | cell division protein FtsL A1I_03100 576136 - 577821 + | penicillin-binding protein A1I_03105 578076 - 578579 + | hypothetical protein TERM 559 579556 - 579539 - g 79 -4.9 -5.2204 | CAGAAGCAACAAAAA TACAAGC TGAT GCTTATA AGCAAGTTGAAAAAT A1I_03110 578689 - 579573 + | hypothetical protein TERM 560 579701 - 579685 - f 70 -3.7 -5.04868 | TTAAATCAAACAAAA TCAGTTG AAA CAAATGA ACTTAAAGATAATGA TERM 561 579932 - 579901 - g 73 -7.5 -3.74056 | GAAGAAGCATTGAAA TTATCAGAAGAAA GACCGG TTTCATCTGATAA GATAAACAAATTTAC A1I_03115 579763 - 580074 + | hypothetical protein TERM 562 580067 - 580050 - f 82 -4.2 -5.62288 | CCAACAAAACAAAAA GAATGA TAAAGG TCATTC GAGATAATAAAATAA TERM 563 580598 - 580579 - f 74 -5.1 -4.96028 | TCTTAAAAAAAATAA TATAAGC TTCGAT GCTTATA ACACACATTTTAACA A1I_03130 580741 - 581331 + | hypothetical protein TERM 564 581365 - 581383 + T 74 -8.8 -3.33969 | AGCTGTGTTATTTTT GCATAGGC ATC GCCCATGC TTATCGCATCCCTTC TERM 565 581495 - 581514 + T 76 -9.4 -3.06087 | opp_overlap 581495, overlap 581487 581483 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 566 581514 - 581495 - T 75 -9.4 -3.01924 | opp_overlap 581487 581483 581495 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 567 581651 - 581615 - T 100 -11.3 -4.45485 | opp_overlap 581618 581622, overlap 581618 581622 ACTAGATCCAGAAAA TAATAAATAATACTAAT AAT ATTAGTATTATTTATTT TCCTAGATGACACCG TERM 568 581618 - 581648 + T 100 -13 -4.2828 | opp_overlap 581615 581618 581622, overlap 581622 AGATCCAGAAAATAA TAAATAATACTAAT AAT ATTAGTATTATTTA TTTTCCTAGATGACA TERM 569 581648 - 581618 - T 100 -13 -4.33785 | opp_overlap 581618 581622, overlap 581615 581622 AGATCCAGAAAATAA TAAATAATACTAAT AAT ATTAGTATTATTTA TTTTCCTAGATGACA TERM 570 581622 - 581644 + T 100 -9.4 -4.7261 | opp_overlap 581618 581615 581622, overlap 581618 CCAGAAAATAATAAA TAATACTAAT AAT ATTAGTATTA TTTATTTTCCTAGAT TERM 571 581644 - 581622 - T 100 -9.4 -4.72617 | opp_overlap 581622 581618, overlap 581618 581615 CCAGAAAATAATAAA TAATACTAAT AAT ATTAGTATTA TTTATTTTCCTAGAT TERM 572 581892 - 581874 - T 81 -8.2 -4.25873 | GGGTCACAAAAAAGA GCAAGTTA GTT TAACTCGC AATCAAAAAGAAGCT TERM 573 582014 - 582025 + T 70 -5.8 -4.20749 | CTGAAGCTGATTCAC GAGC AGCA GCTC TTTATTCCGCTATTG A1I_03145 583803 - 583147 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 574 584046 - 584028 - g 77 -8.2 -3.88029 | AGGTTATACAAAAGA GCAAGTTA GTT TAACTCGC AATCAAAAAGAAGCC A1I_03150 584008 - 584763 + | proline/betaine transporter A1I_03155 584763 - 585221 + | proline/betaine transporter A1I_03160 585888 - 585184 - | guanosine polyphosphate pyrophosphohydrolase/synthetase A1I_03165 586025 - 588286 + | TPR repeat-containing protein TERM 575 588320 - 588301 - T 100 -10 -5.63374 | gap 1, opp_overlap 588295 588302, overlap 588302 GGAAGATTAAAAAAA GGGGGTGCA TTT TGC-CCCCC TTATACTTTGTAGAA TERM 576 588302 - 588320 + T 85 -10.2 -3.64915 | opp_overlap 588301 588302, overlap 588295 GAAGATTAAAAAAAG GGGGTGCA TTT TGCCCCCC TTATACTTTGTAGAA TERM 577 588320 - 588302 - T 93 -10.2 -3.96398 | opp_overlap 588302 588295, overlap 588301 GAAGATTAAAAAAAG GGGGTGCA TTT TGCCCCCC TTATACTTTGTAGAA A1I_03170 589034 - 588339 - | ankyrin repeat-containing protein A1I_03175 589637 - 589281 - | hypothetical protein TERM 578 589310 - 589338 + g 95 -10.6 -4.73105 | opp_overlap 589317, overlap 589317 ACGAAGCAATCCAGT TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTAGAT TERM 579 589331 - 589317 - G 73 -4.3 -5.10497 | opp_overlap 589317 589310 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 580 589317 - 589331 + g 87 -4.3 -5.80727 | opp_overlap 589317, overlap 589310 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 581 590011 - 590035 + H 71 -5.7 -4.45544 | TTCTTACCTCCCCGG CCACCAAAG TTTCATT CATTGGTGG TTTTAATTAATCGGG A1I_03180 590060 - 590239 + | hypothetical protein A1I_03185 590912 - 590478 - | hypothetical protein TERM 582 591151 - 591136 - H 74 -6.2 -4.37502 | opp_overlap 591125 ACGAGCATACTAAAA TGCTTT AAAA AAAGCA AGAATATACCTAGAT TERM 583 591377 - 591364 - g 70 -3.9 -5.11063 | ATTATGGAAGAAAAA TAGAT ATGA ATCTA CAAACTATTTCTGAG A1I_03190 591321 - 591530 + | hypothetical protein A1I_03195 591619 - 591804 + | hypothetical protein A1I_03200 592041 - 591829 - | hypothetical protein def 592394 - 592921 + | peptide deformylase fmt 592997 - 593833 + | methionyl-tRNA formyltransferase TERM 584 594410 - 594439 + G 72 -8.7 -2.99762 | opp_overlap 594433, overlap 594409 594433 ACTTAATTGTCCCAT CTGTACCGTTTAT TCCT GTAAAAGGTACAG CTTTACCTTTTTGGT A1I_03215 593839 - 594909 + | capsular polysaccharide biosynthesis protein A1I_03220 595958 - 594921 - | putative ATPase n2B TERM 585 596491 - 596477 - g 72 -2.8 -5.46129 | GAAGAAATCAAAAAA GGGATA TAT TATGCC CGTAAATATCACGGC A1I_03225 596351 - 597112 + | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 586 597261 - 597246 - T 76 -7.6 -3.95674 | overlap 597251 AAAATGTTTAAAGAA GATAGG TACG CCTATC ATACGACTAGTACCA A1I_03230 598334 - 597699 - | MFS-type transporter TERM 587 598399 - 598417 + r 85 -4.6 -5.65927 | opp_overlap 598399 AAAAGTCAATAGGAA TTTTTACC GGA GGTTAAAA TTTTTTATTTAGATC TERM 588 598472 - 598491 + r 71 -2.2 -5.42862 | AAAATAATGAAGAGT TTTGTATA TTCG TATACCAA TTTTTTTAGGAATAT A1I_03235 599458 - 598736 - | UDP-N-acetylglucosamine pyrophosphorylase A1I_03240 600219 - 599449 - | hypothetical protein A1I_03245 600367 - 600242 - | 50S ribosomal protein L36 A1I_03250 602700 - 600448 - | hypothetical protein TERM 589 601460 - 601477 + g 70 -4.2 -4.99568 | overlap 601472 ACTTTTTTTGCTATT TCTTTC ATATTG GAAAGA TTTTCTTTAATATTA TERM 590 602468 - 602485 + g 88 -3.4 -5.95539 | GTATCTTTTATAACT GTTAGC ATTTGA GCTAGC TTTTTTTCTTTAAAG TERM 591 602779 - 602795 + H 71 -2.3 -5.42862 | TTTTTGTTAATAATG TAGTTTA AAG TGAGCTA TTTTTTTAAAAATGT TERM 592 602833 - 602845 + H 78 -4.1 -5.46657 | opp_overlap 602833 ATACGAAATAAATTA CCATG TTT TATGG TTTTTTCTTGACATA TERM 593 602926 - 602896 - g 100 -11.4 -4.84359 | opp_overlap 602900 602905, overlap 602897 602900 602905 GTACCTTTACAAAAA TTAACAAAACCATA TTT TATGGTTTTGTTAC TAAGTTTAATTATAA TERM 594 602925 - 602897 - g 100 -14.9 -3.50133 | opp_overlap 602900 602905, overlap 602896 602900 602905 TACCTTTACAAAAAT TAACAAAACCATA TTT TATGGTTTTGTTA CTAAGTTTAATTATA TERM 595 602900 - 602922 + G 90 -12.2 -3.26204 | opp_overlap 602897 602896 602900 602905, overlap 602905 CTTTACAAAAATTAA CAAAACCATA TTT TATGGTTTTG TTACTAAGTTTAATT TERM 596 602922 - 602900 - g 100 -12.2 -3.88001 | opp_overlap 602900 602905, overlap 602897 602896 602905 CTTTACAAAAATTAA CAAAACCATA TTT TATGGTTTTG TTACTAAGTTTAATT TERM 597 602905 - 602917 + G 76 -6.3 -4.731 | opp_overlap 602900 602897 602896 602905, overlap 602900 CAAAAATTAACAAAA CCATA TTT TATGG TTTTGTTACTAAGTT TERM 598 602917 - 602905 - g 80 -6.3 -4.93177 | opp_overlap 602905 602900, overlap 602900 602897 602896 CAAAAATTAACAAAA CCATA TTT TATGG TTTTGTTACTAAGTT A1I_03255 602835 - 603536 + | hypothetical protein A1I_03260 603523 - 604095 + | hypothetical protein TERM 599 604111 - 604159 + F 85 -10.7 -3.11962 | opp_overlap 604096, overlap 604116 TAATAATTAAAATTA TTAAATGTCATAACTTTTTTTGT CTT ATAAAGAGAGTTATGGCATTTTA CTTTATGTCTTAAAA TERM 600 604116 - 604154 + F 100 -10.6 -4.66057 | overlap 604111 ATTAAAATTATTAAA TGTCATAACTTTTTTTGT CTT ATAAAGAGAGTTATGGCA TTTTACTTTATGTCT TERM 601 604273 - 604249 - f 81 -7.3 -4.59773 | opp_overlap 604248 604247 604255 TTGCATTTCCAAAAA TTAATACCATA TTT TGTGGTATTAA AATTTAAACTTAATT A1I_03265 604307 - 604558 + | hypothetical protein A1I_03270 604635 - 604850 + | hypothetical protein TERM 602 604864 - 604906 + F 74 -8.1 -3.6053 | opp_overlap 604871 604874, overlap 604865 604874 AATTATTTAGTCTTT TGTAATATAACTTTTCT TGCTTAATT AGAAAAGTTATGTTACG TTAATTTATCCAAAA TERM 603 604865 - 604905 + F 74 -9.4 -2.75997 | opp_overlap 604871 604874, overlap 604864 604874 ATTATTTAGTCTTTT GTAATATAACTTTTCT TGCTTAATT AGAAAAGTTATGTTAC GTTAATTTATCCAAA A1I_03275 604944 - 605645 + | soluble lytic murein transglycosylase and related regulatory proteins A1I_03280 605650 - 606153 + | hypothetical protein A1I_03285 606228 - 606407 + | hypothetical protein A1I_03290 606533 - 606733 + | hypothetical protein A1I_03295 606937 - 607326 + | hypothetical protein TERM 604 607378 - 607365 - f 71 -4.5 -4.8277 | opp_overlap 607365 AAATATAAAAAATAA CCGCA ATAA TGCAG TAGTTGGAATTAGTA A1I_03300 607399 - 608124 + | hypothetical protein A1I_03305 608332 - 609711 + | dihydrolipoamide dehydrogenase A1I_03310 610011 - 611972 + | soluble lytic murein transglycosylase precursor A1I_03315 612054 - 612248 + | hypothetical protein A1I_03320 612267 - 612788 + | hypothetical protein TERM 605 612876 - 612906 + F 72 -6.4 -4.33785 | opp_overlap 612883, overlap 612883 ATTCACAGGATCCAG TTAAAAATACTAGT AAA ATTAGTATTTTTTA TTATTTTCTAGATCT TERM 606 612883 - 612899 + F 90 -4.5 -5.77677 | opp_overlap 612883, overlap 612876 GGATCCAGTTAAAAA TACTAGT AAA ATTAGTA TTTTTTATTATTTTC A1I_03325 613026 - 613985 + | microcin C7 self-immunity protein A1I_03330 614087 - 614359 + | hypothetical protein A1I_03335 614352 - 614651 + | hypothetical protein A1I_03340 617455 - 614915 - | endonuclease TERM 607 615518 - 615532 + g 72 -8.6 -3.15427 | opp_overlap 615507 615525, overlap 615525 ATTATTGCCAATATT CAGCAA AGC TTGCTG TTGATCAAGCATATT TERM 608 615825 - 615805 - G 75 -9.8 -2.92921 | opp_overlap 615801 615800, overlap 615807 ATATAACTCCAGAGA TACCGCAA TCAAG TTGCGGTA TGACACTTTTATTCG TERM 609 615823 - 615807 - G 70 -8 -3.01261 | opp_overlap 615801 615800, overlap 615805 ATAACTCCAGAGATA CCGCAA TCAAG TTGCGG TATGACACTTTTATT TERM 610 616768 - 616795 + g 74 -8.6 -3.23768 | overlap 616765 616765 616791 CATAAATATCCGTAG GCTCATAATAAT ATAT GTTATTGTGAGC TAGTTTTATCTCATT TERM 611 618106 - 618090 - g 72 -3.7 -5.1848 | AATTAATTCAAAAAA CTTTAGT ATT ACTTAAG CCGGAAGAAATTATT A1I_03345 617528 - 618628 + | ankyrin repeat-containing protein TERM 612 619294 - 619260 - T 100 -13.8 -2.83409 | opp_overlap 619260, overlap 619251 TATTAAGCTAGTATA GCTAGTACGAAATATA AAA TTTATCTCGTACTAGC TTTAACAAATTCTTT TERM 613 619260 - 619294 + T 93 -11.6 -3.59649 | opp_overlap 619251 619260 TATTAAGCTAGTATA GCTAGTACGAAATATA AAA TTTATCTCGTACTAGC TTTAACAAATTCTTT A1I_03350 619960 - 619349 - | hypothetical protein A1I_03355 622275 - 620107 - | hypothetical protein TERM 614 622040 - 622061 + g 79 -2.4 -5.88471 | ACAAAAAATTTCATA TTCTTATT TGTATT AATAGGAA TTTTTTTTACTGCTG TERM 615 623285 - 623273 - g 88 -6.3 -5.43553 | AGTTAAAAAAGAAAA TTCTG ATA CAGAA GATGATTCAGTTACA A1I_03360 622554 - 623606 + | ankyrin repeat-containing protein TERM 616 623773 - 623737 - T 85 -8.3 -4.47183 | opp_overlap 623747, overlap 623740 623741 623747 CAGTATTCAAAGAAA CGACTAAAAATATCAAT AAT ATTGATATTTTTAACTG GACCCCGTGAACAAG TERM 617 623770 - 623740 - T 85 -10.8 -3.19523 | opp_overlap 623747, overlap 623737 623741 623747 TATTCAAAGAAACGA CTAAAAATATCAAT AAT ATTGATATTTTTAA CTGGACCCCGTGAAC TERM 618 623769 - 623741 - T 89 -12.1 -2.50991 | opp_overlap 623747, overlap 623740 623737 623747 ATTCAAAGAAACGAC TAAAAATATCAAT AAT ATTGATATTTTTA ACTGGACCCCGTGAA TERM 619 623747 - 623763 + T 78 -6.7 -4.65895 | opp_overlap 623747 623741 623740 623737 AGAAACGACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGACCC TERM 620 623763 - 623747 - T 82 -6.7 -4.85267 | opp_overlap 623747, overlap 623741 623740 623737 AGAAACGACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGACCC TERM 621 623800 - 623788 - T 72 -7.7 -3.62046 | GGACCCCGTGAACAA GTCAC GGG GTGAC AGAGAAAAAATCGAT groEL 625528 - 623876 - | chaperonin GroEL TERM 622 625033 - 625044 + g 72 -5.8 -4.39002 | TGCCAACTTCTTCCA TCGC TTTA GCGA TTTTCTCACCAATTT groES 625842 - 625555 - | co-chaperonin GroES TERM 623 625968 - 625994 + H 78 -3.1 -5.57396 | AATTTATTTGCTTAA TTACTTGAGAT TTAAT ATTGCAAGTAA TTTTTTATTAATTAT A1I_03375 626204 - 626626 + | guanosine polyphosphate pyrophosphohydrolase/synthetase A1I_03380 627345 - 626902 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 624 627026 - 626996 - G 72 -9.2 -2.62515 | opp_overlap 626996 AAGCGTTCTACATTA TCAGCAATATCTTT ATC AAAAATTTTGCTGA TATCCTCATGTGTTA A1I_03385 627881 - 628129 + | hypothetical protein A1I_03390 628723 - 629559 + | putative chitinase TERM 625 629646 - 629664 + F 83 -10.4 -3.36557 | opp_overlap 629635 ATTAGCTAGCCGTAA TGCCTTAA ATC TTAAGGCA TTACTTCCCCTCCTT TERM 626 629681 - 629715 + F 100 -13.2 -5.44119 | opp_overlap 629691 629693, overlap 629682 TACTTCCCCTCCTTT TTTTCAGAGATAGTAA TCC TTACTATTTCTGAAAG TTTTTTTCAAATAAC TERM 627 629682 - 629714 + F 100 -14.5 -3.85748 | opp_overlap 629691 629693, overlap 629681 ACTTCCCCTCCTTTT TTTCAGAGATAGTAA TCC TTACTATTTCTGAAA GTTTTTTTCAAATAA TERM 628 629992 - 630010 + F 70 -4 -4.99035 | overlap 629978 TTTTATTTATAAAAA TAAATTTA AAT TAAGTTTA TTTTTATATAAATAC TERM 629 630013 - 630038 + F 90 -7.9 -5.27477 | opp_overlap 630029 TAAATTAAGTTTATT TTTATATAAAT ACTA ATTTATATAAA TTTTTTAATTCAAAT A1I_03395 630066 - 630374 + | hypothetical protein TERM 630 630460 - 630432 - f 100 -12.1 -4.7878 | opp_overlap 630438, overlap 630438 TATCCAGAAAACAAA TAAAAATATCAAT AAT ATTGATATTTTTA ACTGGATCCCGTGAA TERM 631 630454 - 630438 - f 90 -6.7 -5.59962 | opp_overlap 630438, overlap 630432 GAAAACAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC TERM 632 630438 - 630454 + F 78 -6.7 -4.67353 | opp_overlap 630438 630432 GAAAACAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC A1I_03400 630574 - 630732 + | hypothetical protein TERM 633 630739 - 630778 + T 71 -8.8 -2.80975 | opp_overlap 630734, overlap 630737 630734 630738 TATCAATAAACTTCC TTTCTTTGAAAAGTAGTA TTCA TACTCCTTTCCAAAGAAG CTTTAAATGATGGGT TERM 634 630829 - 630789 - T 72 -8.6 -2.92935 | gap 1, opp_overlap 630790 630791 630792, overlap 630800 630808 AGAAGCTTTAAATGA TGGGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACA-A TTTTAATTTATATAT TERM 635 630790 - 630829 + T 83 -8 -4.66057 | opp_overlap 630789 630800 630808, overlap 630791 630792 GAAGCTTTAAATGAT GGGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACAA TTTTAATTTATATAT TERM 636 630791 - 630828 + T 93 -11.5 -3.38007 | opp_overlap 630789 630800 630808, overlap 630790 630792 AAGCTTTAAATGATG GGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACA ATTTTAATTTATATA TERM 637 630792 - 630827 + T 100 -15 -2.6172 | opp_overlap 630789 630800 630808, overlap 630791 630790 AGCTTTAAATGATGG GTATACAAGGTGAAAA GCGG TTTCCACCTTGTATAC AATTTTAATTTATAT prfB 632722 - 631865 - | peptide chain release factor 2 TERM 638 632746 - 632760 + H 75 -5.8 -4.78237 | GCTCTAATGCATCTT TTAGAT TAG ATCTAA TTTTATTATAAGCTC A1I_03420 633232 - 635034 + | GTP-binding protein LepA A1I_03425 636346 - 635246 - | ankyrin repeat-containing protein TERM 639 636167 - 636183 + g 93 -6.7 -5.36314 | ATCAACTTTTTTTGC TAATAAC TCT GTTATTA TTTTTTCATCTTTTA TERM 640 636404 - 636349 - R 95 -11.7 -3.2963 | opp_overlap 636352, overlap 636352 AGGATTTTTTCATAA TAATTTACCTTAATTAATTTATAGC GGGCGT ACTATAAAGTAATAAAGGTAAATTA TCAATATAAAATATT TERM 641 636352 - 636401 + r 73 -8.3 -3.39505 | opp_overlap 636349 636352 ATTTTTTCATAATAA TTTACCTTAATTAATTTATAG CGGGCGTA CTATAAAGTAATAAAGGTAAA TTATCAATATAAAAT TERM 642 636401 - 636352 - R 80 -9 -3.79113 | opp_overlap 636352, overlap 636349 ATTTTTTCATAATAA TTTACCTTAATTAATTTATAGC GGGCGT ACTATAAAGTAATAAAGGTAAA TTATCAATATAAAAT ileS 639770 - 636444 - | isoleucyl-tRNA synthetase TERM 643 638731 - 638762 + g 71 -6.6 -4.11664 | AAATAGTCAAATAGC GGCTTATAGCTTAA TCCT TGAAGCTCTGAGCC TTTAATTATTGTGAA TERM 644 639886 - 639916 + H 84 -8.6 -4.33182 | opp_overlap 639893, overlap 639893 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 645 639909 - 639893 - H 78 -6.7 -4.67755 | opp_overlap 639886 639893 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 646 639893 - 639909 + H 95 -6.7 -5.77677 | opp_overlap 639893, overlap 639886 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_03435 640048 - 640713 + | putative integral membrane protein A1I_03440 640861 - 641091 + | hypothetical protein A1I_03445 641093 - 641485 + | hypothetical protein A1I_03450 642546 - 641491 - | permease PerM-like protein TERM 647 642474 - 642452 - G 74 -5.7 -4.67256 | opp_overlap 642452 TAAGAAATTATAAAA GCAATAAAA AATGG TCTTATTGC TTCTGAAATTAGCAT A1I_03455 642686 - 642543 - | hypothetical protein A1I_03460 643226 - 642696 - | GrpE protein rph 643375 - 644094 + | ribonuclease PH A1I_03470 644094 - 644843 + | hemolysin A A1I_03475 645289 - 644840 - | putative transcriptional regulator TERM 648 645250 - 645260 + g 72 -2.6 -5.48063 | AACTTGTTAACTGCA TAAA AAT TTTA TTTTTTATCTTGAAT TERM 649 645346 - 645298 - H 93 -11.5 -3.56854 | opp_overlap 645303 645313, overlap 645299 AAAACATTTATATAA GTCTATATGTTATAATATGTATT TTA AATACATATTATAACATATTAAT AATTGTAAACAAGGA TERM 650 645345 - 645299 - H 100 -15 -2.73028 | opp_overlap 645303 645313, overlap 645298 AAACATTTATATAAG TCTATATGTTATAATATGTATT TTA AATACATATTATAACATATTAA TAATTGTAAACAAGG TERM 651 645303 - 645341 + H 100 -18 -3.30474 | opp_overlap 645299 645298, overlap 645313 ATTTATATAAGTCTA TATGTTATAATATGTATT TTA AATACATATTATAACATA TTAATAATTGTAAAC A1I_03480 645368 - 646609 + | hypothetical protein TERM 652 646697 - 646726 + F 80 -10.1 -3.37464 | opp_overlap 646704, overlap 646704 TACAATATTGGAATT AAAAAAAGGTGGG TTAT CCCGCCTTTTTTG TTATAAAATTGATAA TERM 653 646704 - 646719 + F 95 -8.2 -5.55769 | opp_overlap 646704, overlap 646697 TTGGAATTAAAAAAA GGTGGG TTAT CCCGCC TTTTTTGTTATAAAA TERM 654 646719 - 646704 - f 88 -6 -5.63103 | opp_overlap 646704 646697 TTGGAATTAAAAAAA GGTGGG TTAT CCCGCC TTTTTTGTTATAAAA A1I_03485 646705 - 647247 + | hypothetical protein nusA 647256 - 648758 + | transcription elongation factor NusA TERM 655 648831 - 648868 + F 72 -4.5 -4.89852 | gap 1, overlap 648842 TGTACCTGCGAGGTC CAGCTAAAAAATACTAGT GGT GTTAGTATTTTTTA-TTG TTTTTCTGGATCTAG TERM 656 648842 - 648858 + F 80 -2.3 -5.80727 | overlap 648831 GGTCCAGCTAAAAAA TACTAGT GGT GTTAGTA TTTTTTATTGTTTTT TERM 657 650887 - 650871 - g 70 -8.1 -3.09766 | opp_overlap 650860 650868, overlap 650860 650868 AAAATTAAAGAATTA CCTTTAA TTA TTAAAGG CGATGTTCATGGTTC infB 648987 - 651473 + | translation initiation factor IF-2 TERM 658 651658 - 651674 + F 95 -6.7 -5.77677 | opp_overlap 651658 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 659 651674 - 651658 - f 83 -6.7 -5.09895 | opp_overlap 651658 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 660 653071 - 653083 + G 88 -9.1 -4.25104 | GGGTTATGATAGTTG CCGGA AAA TCCGG TTTTGATAAAAAAGA TERM 661 653361 - 653379 + G 79 -8.2 -4.12532 | overlap 653365 GTGATGAATAAGCTT CAAATGGA TAT TCCGTTTG TTTGTATGTCAAAAG uvrC 651831 - 653732 + | excinuclease ABC subunit C A1I_03505 653925 - 653737 - | hypothetical protein A1I_03510 655450 - 653930 - | hypothetical protein TERM 662 655249 - 655272 + g 77 -8.8 -3.68569 | opp_overlap 655233, overlap 655233 CATATTTAGCCATAT GCGTTGCTGG TAAG CTAGCTACGC TTGTTAAATCAGTCG TERM 663 656203 - 656218 + G 71 -3.2 -5.30686 | opp_overlap 656203 GGATATAACTAATAA CGATAG CGGT CTAACG TTTTTTGTAGATATT TERM 664 657359 - 657375 + G 83 -6.7 -4.91109 | ATAACAAGCTGTTAT GATATTT GTA AAATATC TTTTTCTGCTGGAAA A1I_03515 655679 - 657493 + | hypothetical protein A1I_03520 657980 - 657723 - | transposase A1I_03525 658480 - 658019 - | leucine-rich repeat-containing protein A1I_03530 658899 - 658498 - | hypothetical protein A1I_03535 659897 - 658794 - | TPR repeat-containing protein kinase TERM 665 659276 - 659289 + gH 78 -3.1 -5.61596 | TTTGATTATATATCT CCAGA GTTT TTTGG TTTTTTTCTAAAGGT TERM 666 660143 - 660169 + H 77 -4.6 -5.30575 | opp_overlap 660127 660143 660144, overlap 660144 TATTATTTGCACAAA TGAAAATAACAA AGC TTTTTATTTTCG TTTTTTGACTTTTTC A1I_03540 660232 - 660879 + | filamentation induced by cAMP protein Fic A1I_03545 661089 - 661346 + | hypothetical protein A1I_03550 661333 - 661479 + | hypothetical protein TERM 667 662086 - 662058 - g 100 -12.1 -4.34789 | opp_overlap 662062, overlap 662062 CAAGCTATAAAACAA TAAATGAATTATT AAA AATAATTCATTTA GCTAAAATTCAAATA TERM 668 662062 - 662082 + G 77 -8.5 -3.66874 | opp_overlap 662062 662058 CTATAAAACAATAAA TGAATTATT AAA AATAATTCA TTTAGCTAAAATTCA TERM 669 662082 - 662062 - g 89 -8.5 -4.72617 | opp_overlap 662062, overlap 662058 CTATAAAACAATAAA TGAATTATT AAA AATAATTCA TTTAGCTAAAATTCA A1I_03555 661712 - 663652 + | hypothetical protein TERM 670 664103 - 664090 - g 77 -3.9 -5.46657 | TAGGTGAAGAAAAAA TAGAT AAAG ATCTA GCGGATGCATTAATT A1I_03560 663678 - 665543 + | TPR repeat-containing protein TERM 671 665633 - 665620 - T 76 -2.5 -5.50723 | opp_overlap 665628, overlap 665628 TTATGAAAATAAAAA TTTAT AAAT ATAAA CTAAGGTTATATTGT A1I_03565 666804 - 665845 - | transposase TERM 672 666167 - 666177 + g 71 -6.8 -4.07604 | opp_overlap 666167 TCAAAGTCAGCTAAA GCAC TAA GTGC TTCTTCTTCATTTAT A1I_03570 667474 - 667142 - | transposase A1I_03585 669140 - 670528 + | hypothetical protein A1I_03590 671698 - 671135 - | tryptophan repressor binding protein TERM 673 671853 - 671873 + H 87 -11.2 -2.90723 | CATTTTCCCCTGTCA TCCTGCGA CTTGA TCGCAGGA TCTAGTTAAAAATAC TERM 674 671883 - 671905 + H 72 -5 -4.72617 | opp_overlap 671886, overlap 671886 GCAGGATCTAGTTAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 675 671902 - 671886 - H 78 -6.7 -4.67353 | opp_overlap 671886 671883 GGATCTAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 676 671886 - 671902 + H 76 -6.7 -4.42118 | opp_overlap 671886, overlap 671883 GGATCTAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 677 672032 - 672013 - H 76 -9.4 -3.06087 | opp_overlap 672013, overlap 672004 672002 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 678 672013 - 672032 + H 75 -9.4 -3.01924 | opp_overlap 672004 672002 672013 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_03595 672190 - 672378 + | transposase A1I_03600 672384 - 673145 + | transposase A1I_03605 673844 - 673206 - | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B A1I_03610 674543 - 673845 - | succinyl-CoA:3-ketoacid-coenzyme A transferase A1I_03615 674721 - 674945 + | hypothetical protein A1I_03620 674942 - 675772 + | hypothetical protein TERM 679 676037 - 676053 + F 79 -5.3 -5.19328 | GACATACGATGCTTT TTAAAAT TAT ATTTTAA TTTTTATTATAAAGT TERM 680 676835 - 676819 - f 85 -5.9 -5.38047 | GATGTACATAAAAAA TCCTTAG CCA CTAAAGA ACTCATCGCTAATCA TERM 681 678416 - 678380 - f 100 -13.8 -3.05384 | opp_overlap 678383 CGGTTTGTTATTTAA TCCTGTCATCCCGTGG ACAAG CCACGGGATGACATTA ATAATACTGGCTGGG TERM 682 678383 - 678413 + F 100 -19.9 -3.23395 | opp_overlap 678380 TTTGTTATTTAATCC TGTCATCCCGTGG ACAAG CCACGGGATGACA TTAATAATACTGGCT xerD 678518 - 679435 + | site-specific tyrosine recombinase XerD TERM 683 679929 - 679949 + G 74 -4.1 -5.27335 | TTCAATATTGCAGCT TTATAAACT ATT AGTTAATAA TTTTTATTTGAAAAA A1I_03640 679519 - 680361 + | hypothetical protein TERM 684 681244 - 681222 - g 84 -2 -6.11229 | overlap 681224 AGCAAAATAAAAAAA TAGCTATTGA AGG TCAACAACGA GAAAAAATTAAGAGA A1I_03645 680468 - 681688 + | hypothetical protein A1I_03650 683074 - 681704 - | magnesium transporter A1I_03665 684443 - 684523 + | hypothetical protein TERM 685 685411 - 685397 - g 78 -2.2 -5.7827 | opp_overlap 685386, overlap 685386 685399 AAGATAAAGAAAAAA TCTTTA ATT TAAAAA ATAATAACGGTGAAA A1I_03670 684703 - 686547 + | ankyrin repeat-containing protein TERM 686 686811 - 686787 - T 74 -8.6 -3.33162 | overlap 686789 CATTCTATGGCACAA GATCCCGTGA ATAAA TCACGGGATG ACAATATAATTGACT TERM 687 686809 - 686789 - T 93 -11.2 -3.23393 | overlap 686787 TTCTATGGCACAAGA TCCCGTGA ATAAA TCACGGGA TGACAATATAATTGA A1I_03675 687739 - 686879 - | HAD family hydrolase TERM 688 688210 - 688197 - g 77 -4.5 -5.27335 | opp_overlap 688197, overlap 688178 CGTTTTAAATAAAAA CGGCT CGGT AACCG TATCTGATAACGGGC gyrB 687976 - 690402 + | DNA gyrase subunit B TERM 689 690949 - 690961 + G 77 -7.7 -4.10657 | opp_overlap 690948 GCAAGACAAGTAGAT CTGCA TAT TGCAG TTTTAAAGGCTATGG A1I_03685 690568 - 691827 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 690 691985 - 692015 + F 84 -8.6 -4.33182 | opp_overlap 691992, overlap 691992 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 691 692008 - 691992 - f 78 -6.7 -4.67353 | opp_overlap 691992 691985 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 692 691992 - 692008 + F 95 -6.7 -5.77677 | opp_overlap 691992, overlap 691985 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC rpoZ 692199 - 692579 + | DNA-directed RNA polymerase subunit omega acpS 692580 - 692963 + | 4'-phosphopantetheinyl transferase TERM 693 693217 - 693231 + T 74 -2.2 -5.52023 | ATTTATTATCAATCA TATTAA GAT TTGATA TTTTTTGTTCATAAT A1I_03700 693473 - 693255 - | hypothetical protein TERM 694 693474 - 693491 + r 76 -3.5 -5.4492 | ATGAAAATTTGACAT CGTATTA TTTA TAATATG TTTTTTGTATGTATG TERM 695 693734 - 693750 + r 78 -6.7 -4.67755 | opp_overlap 693734 AGAAAATAAAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCT TERM 696 693750 - 693734 - R 100 -6.7 -6.37666 | opp_overlap 693734 AGAAAATAAAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCT A1I_03705 695361 - 693838 - | ATP/ADP translocase TERM 697 694188 - 694198 + g 74 -4 -5.13521 | AGCTATAACCCAGTG TATC TAT GATA TTTTTTAAGTGATTT A1I_03710 697089 - 695467 - | CTP synthetase A1I_03715 697827 - 697093 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 698 698423 - 698407 - R 70 -8.7 -2.62396 | overlap 698409 CAGCTGGTTAGAGCA CACGCCT GAT AAGCGTG AGGTCGGAAGTTCAA A1I_03720 699032 - 698727 - | hypothetical protein A1I_03725 699624 - 699109 - | hypothetical protein A1I_03730 699947 - 700954 + | ankyrin repeat-containing protein A1I_03735 701384 - 702658 + | ankyrin repeat-containing protein A1I_03740 703707 - 702856 - | methylenetetrahydrofolate dehydrogenase A1I_03745 704952 - 703954 - | thioredoxin reductase A1I_03750 705445 - 705029 - | toxin of toxin-antitoxin (TA) system A1I_03755 705671 - 705438 - | antitoxin of toxin-antitoxin (TA) system Phd A1I_03760 706063 - 706566 + | spore coat protein-like protein A1I_03765 706596 - 706940 + | P pilus assembly protein, chaperone PapD TERM 699 707241 - 707224 - g 74 -6.3 -4.44301 | overlap 707221 ATGCAAAATAAACAA GGGAATT ATCT AATCCCC CTTGAAGATATTGAG TERM 700 708296 - 708279 - g 75 -4.9 -4.94672 | overlap 708272 AAATAATATCAAAAA CTTTGAA CATT CTCAAAG AGTTAATTGCGGATA A1I_03770 707065 - 709437 + | P pilus assembly, fimbrial usher protein A1I_03775 709428 - 709889 + | hypothetical protein TERM 701 710293 - 710263 - g 77 -4 -5.5074 | overlap 710264 710268 TAAGTGAAGAAAAAA GTGAAGTCGTGACA TTT TGTCACGAGTTGAA ACTGAAAGCACCCGA TERM 702 710292 - 710264 - g 74 -7.5 -3.88817 | overlap 710263 710268 AAGTGAAGAAAAAAG TGAAGTCGTGACA TTT TGTCACGAGTTGA AACTGAAAGCACCCG TERM 703 710288 - 710268 - g 75 -8.3 -3.57867 | overlap 710264 710263 GAAGAAAAAAGTGAA GTCGTGACA TTT TGTCACGAG TTGAAACTGAAAGCA A1I_03780 710085 - 710930 + | prophage antirepressor TERM 704 711146 - 711177 + T 100 -9.1 -4.73105 | opp_overlap 711153, overlap 711153 ACGAAGCAATCCAGT TAAAAAATACTAA TATTAT TTAGTATTTTTTA TTATTTTTTCTGGAT TERM 705 711153 - 711170 + T 81 -2.8 -5.80727 | opp_overlap 711153, overlap 711146 AATCCAGTTAAAAAA TACTAA TATTAT TTAGTA TTTTTTATTATTTTT A1I_03785 711801 - 711316 - | dinucleoside polyphosphate hydrolase pleD 713177 - 711804 - | response regulator PleD A1I_03795 713290 - 713856 + | elongation factor P TERM 706 714456 - 714439 - g 74 -2.1 -5.60993 | gap 1, overlap 714443 TTGGGTAGAAAAAAA TGATTTAG GTT CTA-ATCA TAAAGGTCTAAGGTT A1I_03800 714020 - 714760 + | extragenic suppressor protein suhB A1I_03805 714840 - 715163 + | hypothetical protein A1I_03810 715291 - 715986 + | phosphatidylserine decarboxylase TERM 707 716728 - 716738 + G 71 -5.4 -4.56607 | ATTAATATATATTTA GCTA TAA TAGC TTTTCTGCTTGCTAG A1I_03815 716176 - 716946 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 708 717358 - 717333 - g 76 -6.3 -4.62783 | opp_overlap 717333 717334 717339, overlap 717334 717339 CAGTCAGGCGAAAAA CTAAAACTTGC TGCA ACAAGTTTTAA TATTGTTTCAACTGA A1I_03820 717156 - 718010 + | multidrug resistance protein A A1I_03825 718566 - 718366 - | hypothetical protein A1I_03830 718811 - 718569 - | BolA-like protein A1I_03835 718877 - 720082 + | EAL domain-containing protein murC 720155 - 721591 + | UDP-N-acetylmuramate--L-alanine ligase TERM 709 722225 - 722240 + G 77 -7.6 -4.11216 | AGCCTATTAAGGAGC GTACTG GCGG CAGTAC TTTTGCAAATCCGGA murB 721588 - 722520 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 710 722591 - 722560 - f 73 -9.5 -2.64274 | gap 1, overlap 722557 ATCTTGTTAAATTTA CTG-GATCCCGTGG ACAAG CCACGGGATGACAG AAGTGGAATGTATAC ddl 722644 - 723609 + | D-alanine--D-alanine ligase TERM 711 723668 - 723653 - g 79 -2.6 -5.83822 | TACAGCTAAAAAAAA CAATAA CATT TCATTG CATCGAAAGTTAGGG TERM 712 724231 - 724210 - g 73 -4.4 -5.12172 | CATTAATAAATAAAA CCTCATCT GCTATT AGATGTGG GGATAGAAGATGGGA A1I_03855 723606 - 724409 + | cell division protein ftsQ A1I_03860 725233 - 724469 - | transposase A1I_03865 725427 - 725239 - | transposase TERM 713 725585 - 725604 + H 76 -9.4 -3.06087 | opp_overlap 725585, overlap 725577 725573 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 714 725604 - 725585 - H 75 -9.4 -3.01924 | opp_overlap 725577 725573 725585 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 715 725734 - 725712 - H 72 -5 -4.72617 | opp_overlap 725715, overlap 725715 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 716 725731 - 725715 - H 76 -6.7 -4.42118 | opp_overlap 725715, overlap 725712 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 717 725715 - 725731 + H 78 -6.7 -4.67755 | opp_overlap 725715 725712 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 718 726252 - 726238 - g 100 -7.2 -5.47431 | overlap 726231 726229 GCAAGATATAAAAAA GCTTTT ACA AAAAGC ATTACAGGAGTTTAA TERM 719 726341 - 726325 - g 83 -9.5 -3.7941 | opp_overlap 726321 TATTCTTGATAATAA TAGGGTT GAA AACCCTA TAGGTATGTACGGAA A1I_03870 725912 - 727147 + | cell division protein ftsA A1I_03875 727794 - 727336 - | hypothetical protein A1I_03880 728305 - 727784 - | cytochrome c A1I_03885 728387 - 729406 + | hypothetical protein lpxC 730259 - 729393 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase A1I_03895 731604 - 730345 - | ATPase A1I_03900 732342 - 731632 - | hypothetical protein A1I_03905 734048 - 732426 - | hypothetical protein A1I_03910 733948 - 734076 + | hypothetical protein TERM 720 734893 - 734876 - g 80 -6.3 -4.84017 | overlap 734888 AATCTTTGATAAAAA TCCTGCT TTAA AGCAAGA AGTTGCTGAAAATAT TERM 721 735174 - 735157 - g 70 -4.2 -5.09895 | TAGCTATTGAAAAAA CTTTAG AAATGA CTAAAG ACAATAAAGAATTAA A1I_03915 734193 - 736601 + | hypothetical protein A1I_03920 736710 - 737096 + | Iron-sulfur cluster assembly transcription factor IscR TERM 722 737890 - 737864 - g 100 -13.9 -4.24963 | opp_overlap 737871 GAGAATCATGTAAAA CTCCAAAGCTT ACAAG AAGCTTTGGAG AAAAAATTAAAGAAA A1I_03925 737093 - 738211 + | NifS-like protein TERM 723 738193 - 738226 + F 73 -8.9 -3.07816 | opp_overlap 738196, overlap 738196 738198 738199 TTTTAAAGAAGTGTA TAATGTCATTCCCGC ATAG GCGGGAAGGGTATTG TTGCGTGGATCGAAA TERM 724 738196 - 738223 + F 74 -8.4 -3.68569 | opp_overlap 738196, overlap 738193 738198 738199 TAAAGAAGTGTATAA TGTCATTCCCGC ATAG GCGGGAAGGGTA TTGTTGCGTGGATCG TERM 725 738198 - 738221 + F 76 -8.8 -3.42256 | opp_overlap 738196, overlap 738196 738193 738199 AAGAAGTGTATAATG TCATTCCCGC ATAG GCGGGAAGGG TATTGTTGCGTGGAT TERM 726 738199 - 738220 + F 76 -10.1 -2.64872 | opp_overlap 738196, overlap 738198 738196 738193 AGAAGTGTATAATGT CATTCCCGC ATAG GCGGGAAGG GTATTGTTGCGTGGA TERM 727 738319 - 738291 - f 100 -12.1 -4.33785 | opp_overlap 738288 738297, overlap 738297 AGATCCAGAAAATAA TAAAAATACTAAT TTT ATTAGTATTTTTA ACTGGATCCCGTGAA TERM 728 738313 - 738297 - f 89 -6.7 -5.47964 | opp_overlap 738288 738297, overlap 738291 AGAAAATAATAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 729 738297 - 738313 + F 78 -6.7 -4.67353 | opp_overlap 738291 738297, overlap 738288 AGAAAATAATAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 730 738415 - 738401 - f 70 -4.4 -5.00895 | GGTATGACACAAAAA TAAAAA AAA TTTTTA ATACTCACAATTATA A1I_03930 738430 - 739662 + | cysteine desulfurase IscS A1I_03935 739825 - 740220 + | scaffold protein A1I_03940 740224 - 740559 + | Iron-sulfur cluster assembly accessory protein A1I_03945 740624 - 740878 + | hypothetical protein A1I_03950 740875 - 741021 + | hypothetical protein A1I_03955 740993 - 741181 + | hypothetical protein A1I_03960 741379 - 741630 + | hypothetical protein TERM 731 741670 - 741646 - T 100 -15.9 -3.73659 | opp_overlap 741640, overlap 741637 741634 AAATAATATATATAA TACTATCGGCT TTT AGCCGATAGTA ACCTAGCTATTTTTA A1I_03965 742923 - 741700 - | proline/betaine transporter TERM 732 743173 - 743155 - g 70 -4.6 -4.85618 | opp_overlap 743155 AAATAACTAATAAAA TCTTGGAA TTA TTACAAGA TATTTCTTATGAGCT A1I_03970 743118 - 744095 + | cell filamentation protein Fic A1I_03975 744097 - 744462 + | hypothetical protein ruvA 744464 - 745075 + | Holliday junction DNA helicase motor protein TERM 733 746190 - 746201 + G 74 -3 -5.44721 | opp_overlap 746190 AAACGCAGAAAAATA TACT AACG AGTA TTTTTTTGACATGGT A1I_03985 745138 - 746307 + | hypothetical protein ruvB 746374 - 747402 + | Holliday junction DNA helicase B TERM 734 748148 - 748134 - g 100 -7.2 -5.70829 | opp_overlap 748133 748136 AATATTACAAAAAAA CATCTA AAT TAGATG CGTTAGTTTCACCGA A1I_03995 747395 - 749158 + | multidrug resistance protein A1I_04000 749256 - 750500 + | AmpG A1I_04005 750615 - 751538 + | penicillin-binding protein dacF precursor TERM 735 752795 - 752783 - T 70 -3.5 -5.07011 | opp_overlap 752783 TATATAAAGCAAAAA TAAAA AAT TTTTA TTATCCTGAACTAAA A1I_04020 754591 - 753095 - | replicative DNA helicase TERM 736 754489 - 754477 - G 70 -6.3 -4.21908 | opp_overlap 754477 754476 CATTATTAGTTAAAA TTGCT CCA AGCAA CATTTGTTCTGCTTG A1I_04025 755011 - 754619 - | hypothetical protein A1I_04030 755237 - 754992 - | hypothetical protein A1I_04035 755866 - 755306 - | aromatic acid decarboxylase TERM 737 757338 - 757320 - gR 72 -6.1 -4.27467 | opp_overlap 757320 TAATAGGAACACAAA TGATAAC AAAAG GTTATCA TTTTCCAAATCTTAC TERM 738 757320 - 757338 + Gr 70 -6.1 -4.14472 | opp_overlap 757320 TAATAGGAACACAAA TGATAAC AAAAG GTTATCA TTTTCCAAATCTTAC A1I_04045 758222 - 757818 - | hypothetical protein A1I_04040 755930 - 757876 + | primosome assembly protein PriA A1I_04050 759337 - 758453 - | hypothetical protein A1I_04055 759910 - 759356 - | hypothetical protein TERM 739 759497 - 759510 + g 75 -2.5 -5.61277 | ATTTTTTATGGCATG TAAAT AGAA ATTTA TTTTCTTTTTTTCTC A1I_04060 762382 - 760298 - | ankyrin repeat-containing protein TERM 740 762778 - 762764 - g 76 -8.6 -3.54543 | ATTTAGTTGCTGAAA CTACTC TTA GAGTAG AAGATTTGGTATTAC A1I_04065 762697 - 763674 + | delta-aminolevulinic acid dehydratase TERM 741 764052 - 764064 + G 75 -4.9 -5.0133 | AAATATAGCTGAATT TTTAG GGT CTAAA TTTTTTGCAGCAATA TERM 742 764255 - 764234 - g 85 -10.3 -3.53563 | opp_overlap 764239, overlap 764239 ATATGTCTGCTGAAA CTAAACCAA GTTC TTGGTTTAG AAAAGATGGGGGCAG A1I_04070 763828 - 765423 + | hypothetical protein A1I_04080 765874 - 767664 + | Outer memberane protein Sca15 TERM 743 767776 - 767796 + F 85 -11.2 -2.78816 | GTTTCGTCTCTGTCA TCCCGTGA TTTAT TCACGGGA TCTAGTAAAAAATAC TERM 744 767799 - 767835 + F 100 -13.5 -4.45485 | opp_overlap 767809, overlap 767809 TTTATTCACGGGATC TAGTAAAAAATACTAAT AAA ATTAGTATTTTTTATTA TTTTCTGGATCTAGT TERM 745 767809 - 767825 + F 95 -6.7 -5.77677 | opp_overlap 767809, overlap 767799 GGATCTAGTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 746 767825 - 767809 - f 83 -6.7 -5.1675 | opp_overlap 767809 767799 GGATCTAGTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 747 767936 - 767955 + F 75 -9.4 -3.01924 | opp_overlap 767927 767925 767936 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 748 767955 - 767936 - f 76 -9.4 -3.06087 | opp_overlap 767936, overlap 767927 767925 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_04085 768114 - 768302 + | transposase A1I_04090 768308 - 769069 + | transposase TERM 749 770427 - 770415 - g 80 -9.1 -3.65522 | overlap 770423 TAGTCATTGCAAGAA GACGC AAA GCGTC GACGAAGCAATCTCA A1I_04095 769411 - 771252 + | aminopeptidase P TERM 750 771387 - 771400 + F 85 -3.9 -5.80727 | opp_overlap 771387 GGGATCCAGTAAAAA TACTA GTAC TAGTA TTTTTTATTATTTTT A1I_04100 771840 - 772475 + | leucine-rich repeat-containing protein TERM 751 773257 - 773310 + T 100 -13.7 -2.73177 | opp_overlap 773272, overlap 773255 773272 AGTAATTTGAGGGTA TGAAATATAAAAAAAGGATAAGATT GAAA ACTCTTATCCTTTTTTTATTTTTTA TGCGTTATTATTATT TERM 752 773272 - 773295 + T 95 -6.8 -6.28401 | opp_overlap 773272, overlap 773257 773255 TGAAATATAAAAAAA GGATAAGATT GAAA ACTCTTATCC TTTTTTTATTTTTTA TERM 753 773295 - 773272 - T 95 -6.8 -5.88197 | opp_overlap 773257 773255 773272 TGAAATATAAAAAAA GGATAAGATT GAAA ACTCTTATCC TTTTTTTATTTTTTA A1I_04105 773721 - 773308 - | putative transcriptional regulator A1I_04110 774062 - 774907 + | putative ribonuclease BN A1I_04115 775358 - 774999 - | hypothetical protein A1I_04120 775572 - 775402 - | hypothetical protein A1I_04125 776093 - 775632 - | hypothetical protein A1I_04130 776832 - 776116 - | hypothetical protein A1I_04135 777061 - 776837 - | hypothetical protein A1I_04140 777463 - 777224 - | hypothetical protein A1I_04145 777851 - 778789 + | malonyl CoA-acyl carrier protein transacylase TERM 754 779174 - 779186 + G 76 -3.5 -5.32944 | opp_overlap 779174 CCTTAGAGAAAAAGG TAATA ATT TATTA TTTTTTAATTCTAAA A1I_04150 778773 - 779687 + | hypothetical protein TERM 755 779738 - 779752 + T 74 -8.6 -3.31792 | opp_overlap 779750, overlap 779726 779725 AGTGGCCGAAGGCGG CGGTTT GCT AAACCG TTATACGGGTCATAC A1I_04155 780041 - 779808 - | hypothetical protein A1I_04160 780300 - 780016 - | hypothetical protein A1I_04165 780750 - 780478 - | hypothetical protein A1I_04170 781464 - 780901 - | polypeptide deformylase A1I_04180 782545 - 782081 - | hypothetical protein A1I_04175 781602 - 782345 + | hypothetical protein A1I_04185 783284 - 783631 + | hypothetical protein A1I_04190 783609 - 784112 + | hypothetical protein TERM 756 784620 - 784604 - g 78 -2.3 -5.79588 | overlap 784606 TTAAAACTAAAAAAA TGTTAGA GTT TCTAAAA AAATCCATACATATT TERM 757 785565 - 785547 - g 74 -7.6 -3.91197 | TGAGAAATTAGGAAA CATATTAT TTA ATAATATG CAATATATAGAAGCT A1I_04195 784174 - 785967 + | hypothetical protein TERM 758 786093 - 786113 + T 91 -11.2 -3.07344 | TGCTTACTTTTTTGA GTATGCCC ATTAG GGGCATAC TGTCTTAAGAAGTAA A1I_04200 786620 - 786141 - | hypothetical protein A1I_04205 786955 - 786623 - | hypothetical protein TERM 759 788290 - 788276 - R 78 -4.2 -5.4833 | opp_overlap 788280, overlap 788269 CCAGCCAACAAAAAA GGCG GCTTTTT CGCC AAAGCTTTCACGGAT TERM 760 788484 - 788452 - R 70 -4.3 -5.00765 | gap 1, opp_overlap 788465 AAGGAAGTATAAAAA CACTAGT-ACCGAT CTGGCT ACCGGTTACTAATG CAAAAACTGCCCAAA TERM 761 788703 - 788675 - R 87 -11.1 -3.26947 | opp_overlap 788675 TAATTGGCAGATGAA GCTACTACCAGTT AAA AACCGATAGCAGC TGATATTTTTTAGGC A1I_04225 790425 - 788713 - | glutamine amidotransferase TERM 762 788763 - 788741 - GR 79 -9.2 -3.48807 | opp_overlap 788740 788743 GTAGGAAATTCAGAA GATACGCCTA TTA CAGGCATATC AGTTATTTCTTGATC TERM 763 789112 - 789128 + gr 72 -5.1 -4.78149 | opp_overlap 789111 789112 TGTTTCTAAAGAAAT CCCTAAT TCT ACTAGGG TTTTTACATTATAGC TERM 764 789778 - 789788 + gr 86 -2.6 -6.01187 | opp_overlap 789778 ACAAGTCTCAACAAA TATT TTA AATA TTTTTTTATTTCGTT A1I_04230 791197 - 790388 - | glutamine amidotransferase TERM 765 790719 - 790729 + gH 85 -2.6 -5.95539 | GAAGGTAGAGGTTCC TTAT TAA ATAA TTTTTTTATTTGAGA TERM 766 791265 - 791241 - H 89 -11.7 -2.88215 | opp_overlap 791244, overlap 791236 791244 TATCACTAAATATGA TAATTACCATA AAA TATGGTAATTA TTGAAAAAAGTCAAG TERM 767 791262 - 791244 - H 77 -9 -3.57908 | opp_overlap 791244, overlap 791241 791236 CACTAAATATGATAA TTACCATA AAA TATGGTAA TTATTGAAAAAAGTC TERM 768 791244 - 791262 + H 77 -9 -3.61715 | opp_overlap 791244 791241 791236 CACTAAATATGATAA TTACCATA AAA TATGGTAA TTATTGAAAAAAGTC TERM 769 791399 - 791368 - H 89 -12 -2.83715 | opp_overlap 791372 791375, overlap 791370 791372 791375 791390 TTTATTATGATTAGA TATAGAATAATTAA TAAT TTAATTATTCTATA ATAATACTACCTATA TERM 770 791397 - 791370 - H 79 -10.2 -2.96692 | opp_overlap 791372 791375, overlap 791368 791372 791375 791390 TATTATGATTAGATA TAGAATAATTAA TAAT TTAATTATTCTA TAATAATACTACCTA TERM 771 791880 - 791896 + H 77 -8.1 -3.83816 | overlap 791879 791883 AAGCCATTATTTGTT GAAGTTA AAT TAACTTC TTTAGCTTCATTTAT TERM 772 795048 - 795077 + H 93 -5.7 -5.68438 | opp_overlap 795063 TAAATGAGAAATCAT CGCTTGTGGTTAA TATG TAAGCTACAGGCG TTTTTTCTTTACTAG TERM 773 795996 - 796010 + H 80 -8.6 -3.73234 | overlap 795994 GTTTTTTGAGTTCTT CACCTA AAA TAGGTG TGTTTGTATTAATTA TERM 774 796561 - 796573 + G 70 -4.1 -5.08824 | overlap 796562 GTGATTCGGAAAAAA TTCTC ATC GAGGA TTTTTTAGATAAAAA TERM 775 796804 - 796777 - g 75 -5 -5.06414 | gap 1 CTGCTGTAACAAAAA GCTTACAAGTTCC TGA GAAACTTA-AAGC TTGCGTGGAAGTTTA A1I_04245 796524 - 797108 + | hypothetical protein TERM 776 799404 - 799385 - g 82 -6.4 -4.94902 | overlap 799395 GAAGTATTACAAAAA GCTTTAGC AATT GCAAAAGC AATTCCAGTAAAAAT A1I_04250 797162 - 799510 + | hypothetical protein TERM 777 799568 - 799520 - f 70 -4 -4.94168 | gap 1, opp_overlap 799529 799531, overlap 799546 AGATAATAAAAGAAA GATT-GTGCTGACCATTCCGACA TCAA TATCGGAATAGTCTTGACTAATC CGATATAGGGCTATA TERM 778 799573 - 799546 - f 80 -10 -3.26471 | opp_overlap 799531 799529, overlap 799520 CCATTCCGACATCAA TATCGGAATAGT CTTG ACTAATCCGATA TAGGGCTATAAAATA A1I_04255 799614 - 800819 + | ATPase A1I_04260 802113 - 800974 - | DNA polymerase III subunit beta pheT 804730 - 802118 - | phenylalanyl-tRNA synthetase subunit beta TERM 779 803423 - 803439 + g 81 -2.9 -5.77853 | opp_overlap 803422, overlap 803421 TTTTTCTAGATAACC TGCTGGA AAA TCCAACG TTTTTTTTGCAGGTT TERM 780 803803 - 803827 + g 84 -10 -3.494 | overlap 803805 803822 GAAATCCCCTATTGT CATCCCGTGG CTTGT CCACGGGATC TTGTATAACAGATTC TERM 781 803805 - 803825 + g 90 -12.6 -3.31905 | overlap 803803 803822 AATCCCCTATTGTCA TCCCGTGG CTTGT CCACGGGA TCTTGTATAACAGAT pheS 805776 - 804727 - | phenylalanyl-tRNA synthetase subunit alpha TERM 782 805832 - 805801 - R 76 -9.5 -3.05844 | gap 1 TGTCTTATGTTAATA CTGTCATCCCGTGG CTTGT CCACGGGATC-CAG TTAAAAATACAAATA A1I_04275 807201 - 805954 - | MiaB-like tRNA modifying enzyme dapF 808003 - 807194 - | diaminopimelate epimerase A1I_04285 808126 - 809136 + | glycosyltransferase A1I_04290 809449 - 810615 + | RND efflux system, outer membrane protein TERM 783 810757 - 810741 - f 90 -4.5 -5.77677 | opp_overlap 810741 810743, overlap 810743 GAAAATAATAAAAAA CACTAAT TTT ATTAGTA TTTTTTAGCTGGATC TERM 784 811522 - 811536 + F 75 -7.2 -4.08546 | opp_overlap 811521 811522 TAAAATCAATAAATC TCAGAA AAA TTCTGA TTTATCATTAATAGT TERM 785 813597 - 813556 - g 77 -8.7 -3.59935 | gap 1, opp_overlap 813555, overlap 813554 813557 GAAGGATGAGAAACA CTCTACTGTCATCCCGCAGC TTG ACTGCGGGATCTCAGGAG-G CATAATATCACAAGC TERM 786 813597 - 813557 - g 72 -8.9 -2.75238 | opp_overlap 813555, overlap 813556 813554 AAGGATGAGAAACAC TCTACTGTCATCCCGCAGC TTG ACTGCGGGATCTCAGGAGG CATAATATCACAAGC TERM 787 813647 - 813623 - g 74 -8.6 -3.29461 | overlap 813625 CAAGCTGCTTCACAA GATACCGTGG TCAAG CCACGGTATG ACAAAATTCCCCTTA TERM 788 813645 - 813625 - g 85 -11.2 -3.21395 | overlap 813623 AGCTGCTTCACAAGA TACCGTGG TCAAG CCACGGTA TGACAAAATTCCCCT A1I_04305 812072 - 815230 + | RND family efflux transporter A1I_04310 815332 - 815640 + | putative transcriptional regulator A1I_04315 815637 - 815930 + | putative transcriptional regulator A1I_04320 816070 - 817014 + | malate dehydrogenase A1I_04325 817262 - 817501 + | hypothetical protein TERM 789 817497 - 817479 - f 71 -3.2 -5.26907 | opp_overlap 817479 TAATAGAAAAGAAAA TATACG CAACCCT CGTATA TTAAATAAAAATTAT A1I_04330 817570 - 818274 + | variable membrane protein-like protein TERM 790 818561 - 818533 - g 81 -4 -5.54894 | AATTTATTAAAAAAA TCCCAAAATTTA TGGAT TAAATTTCGTGA TGCCGATTGTGAATT A1I_04335 818323 - 818727 + | hypothetical protein TERM 791 818733 - 818753 + T 86 -9.8 -3.73953 | opp_overlap 818723 818733 818730, overlap 818729 AAATAGATAAAGTTA TGCCATGA CTTAA TCATGGCA TTTAGTACACCTAAT TERM 792 818753 - 818733 - T 78 -10.5 -2.76661 | opp_overlap 818729 818733, overlap 818723 818730 AAATAGATAAAGTTA TGCCATGAC TTA ATCATGGCA TTTAGTACACCTAAT A1I_04340 819034 - 818768 - | hypothetical protein A1I_04345 819215 - 820357 + | hypothetical protein TERM 793 820533 - 820549 + T 83 -6.7 -5.09895 | opp_overlap 820533 GGAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTTAGCTGGCTC TERM 794 820549 - 820533 - T 95 -6.7 -5.72254 | opp_overlap 820533 GGAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTTAGCTGGCTC A1I_04350 821420 - 820659 - | 3'(2'),5'-bisphosphate nucleotidase TERM 795 820729 - 820741 + g 74 -6.3 -4.45117 | TTGGCAAAGTCTTTC TTACC ATA GGTAA TTTCTTTGCCATCTA A1I_04355 822270 - 821422 - | hypothetical protein A1I_04360 823111 - 822233 - | hypothetical protein TERM 796 823141 - 823151 + H 74 -8.2 -3.66999 | ATAATACATTGTCAT GCCG TGG CGGC TTTGCCTGCGTGGAT TERM 797 823252 - 823218 - H 84 -6.7 -5.31456 | opp_overlap 823220 823228, overlap 823221 823228 GCAATCCAGAAAAAA TAATAAAAAATGCTA TAAGT TAGCATTTTTTACTG GATTGCTTCGTCAAT TERM 798 823249 - 823221 - H 100 -10.6 -4.73105 | opp_overlap 823220 823228, overlap 823218 823228 ATCCAGAAAAAATAA TAAAAAATGCTA TAAGT TAGCATTTTTTA CTGGATTGCTTCGTC TERM 799 823228 - 823242 + H 75 -4.3 -5.18357 | opp_overlap 823221 823218 823228, overlap 823220 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTACTGGATTG TERM 800 823242 - 823228 - H 88 -4.3 -5.80727 | opp_overlap 823228 823220, overlap 823221 823218 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTACTGGATTG A1I_04365 823404 - 823841 + | hypothetical protein A1I_04370 824093 - 825604 + | hypothetical protein A1I_04375 825591 - 825686 + | hypothetical protein TERM 801 825754 - 825780 + T 71 -8.9 -2.79276 | opp_overlap 825751 825752, overlap 825758 TTAGAATTTAAAGGC TGAAGCAATTT GTTTA AAATTGCTTCG TCATTAATGCATGCT A1I_04380 829811 - 825732 - | TPR repeat-containing protein TERM 802 827990 - 828002 + g 75 -4.9 -5.04377 | overlap 827969 AATTAAGATAATCTT TTACT TTA AGTAA TTTATTTTCTTTTAA A1I_04385 830055 - 830369 + | hypothetical protein TERM 803 830393 - 830417 + F 93 -11.4 -3.48593 | overlap 830395 TTGTTACATTGGTGT CACCCCGTGG CTTGA CCACGGGGTC TTGTATCACAAACTG TERM 804 830395 - 830415 + F 100 -14 -3.31726 | overlap 830393 GTTACATTGGTGTCA CCCCGTGG CTTGA CCACGGGG TCTTGTATCACAAAC TERM 805 830585 - 830606 + G 93 -8.9 -4.83169 | AATTTAATGATTCAC TCTCTTTAT AGTA ATAAAGAGA TTTTTATGCGGGAGT TERM 806 832193 - 832176 - g 75 -4.9 -5.05606 | TTGAACAAAAACAAA TAGCAAA TGCT TCTGCTA AAAATCTAGAGTTAA TERM 807 832283 - 832267 - g 71 -2.3 -5.39905 | AGCAAATAATAAAAA TAACGAA GAG TTAGTTA AGTTAATATTTGATC A1I_04390 830522 - 832387 + | heat shock protein 90 TERM 808 832388 - 832376 - f 80 -6.3 -4.8667 | opp_overlap 832376 GATATTGTACAAAAA GCTAT ATT ATAGC TTTAAAATTATTTAG TERM 809 832648 - 832622 - f 75 -5.9 -4.81852 | gap 1, overlap 832626 TTATAATTAATAAAA TG-GATTCCCGC TTTT GCGGGAATGACA GAGAAAATGTCTTAT TERM 810 832643 - 832626 - f 85 -11.3 -2.86514 | overlap 832622 AATTAATAAAATGGA TTCCCGC TTTT GCGGGAA TGACAGAGAAAATGT A1I_04395 832655 - 833899 + | 5-aminolevulinate synthase TERM 811 834029 - 834057 + F 100 -10.6 -4.73105 | opp_overlap 834036, overlap 834036 ACGAAGCAATCCAGC TAAAAAATGCTA ATTTA TAGCATTTTTTA TTATTTTTTCTAGAT TERM 812 834036 - 834050 + F 88 -4.3 -5.80727 | opp_overlap 834036, overlap 834029 AATCCAGCTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 813 834050 - 834036 - f 72 -4.3 -5.10497 | opp_overlap 834029 834036 AATCCAGCTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT A1I_04400 834195 - 834656 + | hypothetical protein TERM 814 835256 - 835235 - g 77 -3.1 -5.65496 | CACTAAAAAGAAAAA TTGCTATAA TGAT TTATAGAAA CGAATTTAACAAGGA A1I_04405 835048 - 835812 + | hypothetical protein A1I_04420 838124 - 838020 - | hypothetical protein A1I_04425 838705 - 838124 - | competence protein F A1I_04430 839148 - 838789 - | hypothetical protein TERM 815 839227 - 839237 + r 76 -2.6 -5.61277 | TCCAGCAGATAGTTT TAAA GCA TTTA TTTTATTTTTTTATC A1I_04435 840344 - 839235 - | hypothetical protein TERM 816 839631 - 839641 + g 74 -5.4 -4.77775 | TTTTTTGTCCTCTCG CACT TCA AGTG TTTCTTTTGTAACGT TERM 817 839927 - 839947 + g 71 -8.3 -3.32769 | opp_overlap 839921 839942, overlap 839921 CTTTATCAAGTGGAT CAGCTGCTT TTG AAACAGCTG TTGCTACTTTGGACC TERM 818 840202 - 840225 + g 74 -6 -4.67943 | GAGGGTGCTGGTTGT TCCTGATCTT GTAC AGGTTCAGGA TTTTGTATATTAACC A1I_04440 841492 - 840350 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 819 841322 - 841308 - GR 72 -2.8 -5.48063 | overlap 841309 ATGGAAGATAAAAAA TCCTTA GAA TAAGGC GTCAAAGCAGTGGTT A1I_04445 841730 - 841464 - | putative monovalent cation/H+ antiporter subunit F TERM 820 841821 - 841833 + GH 81 -9.1 -3.58343 | opp_overlap 841820 841819 ATGTTTAATAAGATT GCCAC ATC GTGGC TTTGCCACTCCTCGC A1I_04450 841720 - 841857 + | hypothetical protein A1I_04455 842204 - 842956 + | ankyrin repeat-containing protein TERM 821 842972 - 843025 + F 86 -10.1 -3.83026 | gap 1, opp_overlap 842972 842987, overlap 842974 AATAAAAATCAGTAA TGTTTTAGATATATAGCAGAAGATTA TTA TAAACTTTTGCTGTATA-CTAAAATA TTTAATATAAGCACC TERM 822 842974 - 843023 + F 83 -10.5 -3.5032 | gap 1, opp_overlap 842972 842987, overlap 842972 TAAAAATCAGTAATG TTTTAGATATATAGCAGAAGATTA TTA TAAACTTTTGCTGTATA-CTAAAA TATTTAATATAAGCA A1I_04460 843869 - 844204 + | hypothetical protein TERM 823 844206 - 844259 + F 74 -7.9 -3.83154 | gap 1, opp_overlap 844212 844216 844217 844248, overlap 844248 TGAAATTACGCTAAA TATAAATTA-ATTGTATAGATGTTAC TAG GTAACATCTATACACTATAACTAATA TTTACGTTATAGTTC TERM 824 844253 - 844212 - f 100 -11.3 -4.33928 | gap 1, opp_overlap 844206 844248, overlap 844216 844217 844248 TACGCTAAATATAAA TTA-ATTGTATAGATGTTAC TAG GTAACATCTATACACTATAA CTAATATTTACGTTA TERM 825 844248 - 844216 - f 100 -13.7 -3.72621 | opp_overlap 844206, overlap 844212 844217 CTAAATATAAATTAA TTGTATAGATGTTAC TAG GTAACATCTATACAC TATAACTAATATTTA TERM 826 844247 - 844217 - f 100 -17.2 -2.82488 | opp_overlap 844206, overlap 844216 844212 TAAATATAAATTAAT TGTATAGATGTTAC TAG GTAACATCTATACA CTATAACTAATATTT A1I_04465 844299 - 844877 + | putative sigma(54) modulation protein A1I_04470 844877 - 845389 + | carbonic anhydrase/acetyltransferase, isoleucine patch superfamily protein A1I_04475 846453 - 845632 - | glutamine synthetase A1I_04480 846452 - 847174 + | hypothetical protein TERM 827 847551 - 847531 - g 78 -6.9 -4.46072 | GGCAATAAAGATAAA TTACCTTGA TTA TCATGGTAA CAAACAGGAATTAGA A1I_04485 847184 - 847735 + | polypeptide deformylase A1I_04490 847912 - 848184 + | hypothetical protein A1I_04495 849498 - 848191 - | hypothetical protein A1I_04500 851070 - 849694 - | hypothetical protein A1I_04505 853102 - 851141 - | DNA helicase II A1I_04510 854116 - 853160 - | transposase TERM 828 854296 - 854277 - R 75 -9.4 -3.01924 | opp_overlap 854277 854269 854265 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 829 854277 - 854296 + r 76 -9.4 -3.06087 | opp_overlap 854277, overlap 854269 854265 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT A1I_04515 855533 - 854553 - | glycosyl transferase A1I_04520 856342 - 855521 - | glycine cleavage T-protein TERM 830 855614 - 855629 + g 70 -6.2 -4.2828 | TTTCTCTTCTTTAAC TAAAGC TATA GCTTTA TTTTGATAGCTGGAA TERM 831 855894 - 855916 + g 79 -5.1 -5.29385 | opp_overlap 855894 TCTATTATGGCAAAA TTATATTTA TCATC TAAATATAA TTTTTTACTTAGATT A1I_04525 856456 - 857247 + | hypothetical protein A1I_04530 857260 - 858120 + | ribonuclease D A1I_04535 858859 - 858332 - | hypothetical protein A1I_04550 860105 - 859593 - | methylated-DNA--protein-cysteine methyltransferase TERM 832 860370 - 860335 - R 90 -7.9 -5.31456 | opp_overlap 860334 860333 860337 GCAATCCAGAAAAAA TAGTAAAAAAGTACT GATTTT AGTATTTTTTTACTA GATTGCTTCGTCAAA TERM 833 860337 - 860368 + r 70 -9 -2.61216 | opp_overlap 860335, overlap 860334 860333 AATCCAGAAAAAATA GTAAAAAAGTACTG ATTT TAGTATTTTTTTAC TAGATTGCTTCGTCA A1I_04555 861063 - 860458 - | hypothetical protein A1I_04560 861531 - 861142 - | hypothetical protein A1I_04565 861883 - 861722 - | F pilin acetylation protein TraX A1I_04570 863387 - 861870 - | integral membrane protein MviN TERM 834 863151 - 863173 + g 100 -9.2 -5.32944 | opp_overlap 863149 ACCAGAAAATCTACC TGCTGCTTTC TTA GAAATCAGCA TTTTTTCATTATAAA TERM 835 863553 - 863577 + r 74 -8.6 -3.33162 | overlap 863551 863555 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 836 863555 - 863575 + r 93 -11.2 -3.23393 | overlap 863551 863553 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA A1I_04575 864231 - 863704 - | inorganic pyrophosphatase TERM 837 864322 - 864346 + r 74 -8.6 -3.33162 | overlap 864320 864324 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 838 864324 - 864344 + r 93 -11.2 -3.23393 | overlap 864320 864322 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA A1I_04580 864822 - 864409 - | cytochrome c-type biogenesis protein CcmE A1I_04585 864925 - 864800 - | hypothetical protein A1I_04590 865539 - 864925 - | Sco2 protein precursor secD 867102 - 865558 - | preprotein translocase subunit SecD yajC 867526 - 867086 - | preprotein translocase subunit YajC A1I_04605 868884 - 867697 - | glycosyltransferase A1I_04610 868917 - 869717 + | putative hydrolase/acyltransferase A1I_04615 869821 - 870585 + | hypothetical protein TERM 839 870687 - 870676 - g 77 -3 -5.66338 | overlap 870684 AAACAGAAGAAAAAA TTAC AGGA GTAA AAGTTACTAAAGCAC A1I_04620 870594 - 871592 + | RND family efflux transporter MFP subunit A1I_04625 873666 - 871594 - | glycosyltransferase TERM 840 873384 - 873362 - G 74 -7 -4.29304 | opp_overlap 873362 873380, overlap 873365 TTAGGATAATATAAA TCATCATGGC TTA GCCATGAAAA ATATTTTCCTTTCAT TERM 841 873381 - 873365 - G 84 -10.9 -3.13369 | opp_overlap 873362 873380, overlap 873362 GGATAATATAAATCA TCATGGC TTA GCCATGA AAAATATTTTCCTTT A1I_04630 874926 - 873874 - | hypothetical protein TERM 842 874721 - 874735 + g 77 -4.2 -5.32699 | opp_overlap 874721 ATTATTATCGAATTA GTACCT GAT AGGTTC TTTTTTAATATTTCA A1I_04635 876053 - 874920 - | UDP-N-acetylglucosamine 2-epimerase A1I_04640 877071 - 876046 - | putative nucleoside-diphosphate sugar epimerase CapD TERM 843 877105 - 877129 + r 81 -10 -3.48593 | overlap 877103 877107 877127 TTTTAAGTTAATTGT CACCCCGTGA CTTGA TCACGGGGTC TTGTATCACAGACTG TERM 844 877107 - 877127 + r 100 -12.6 -3.31726 | overlap 877103 877105 TTAAGTTAATTGTCA CCCCGTGA CTTGA TCACGGGG TCTTGTATCACAGAC TERM 845 877175 - 877155 - R 100 -16.9 -3.06162 | GACTGTATCCTAAGA TCCCGTGGC GGG GCCACGGGA TGACACACATCACCC A1I_04645 878039 - 877185 - | dTDP-4-dehydrorhamnose reductase TERM 846 878039 - 878049 + r 72 -2.6 -5.35224 | opp_overlap 878042, overlap 878042 AAATCAATATTTTCA TAAT AAA ATTA TTTTATTTTTATGGC gltX 879557 - 878220 - | glutamyl-tRNA synthetase TERM 847 879524 - 879502 - G 80 -10.6 -2.62184 | GCTGCTCTTATATTA CCGACATGTA ACA TACCTGTCGG TGATGGAGCAAATCG A1I_04655 881966 - 879564 - | DNA topoisomerase I A1I_04660 882702 - 882031 - | putative DNA processing protein DprA A1I_04665 883201 - 883001 - | putative DNA processing protein DprA A1I_04670 883993 - 883361 - | thioredoxin peroxidase 1 A1I_04675 885007 - 884072 - | membrane protease subunit stomatin/prohibitin-like protein TERM 848 885106 - 885156 + r 70 -5.5 -4.20516 | gap 1, overlap 885108 885110 TTGCGAGGAGGCGAA GCCGACGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGCTCAC TTTGTTCGCTCGCAA TERM 849 885108 - 885155 + r 73 -8.7 -3.11988 | gap 2, overlap 885106 885110 GCGAGGAGGCGAAGC CGA-CGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGCTCA CTTTGTTCGCTCGCA TERM 850 885110 - 885152 + r 85 -11.5 -2.76539 | gap 1, overlap 885108 885106 GAGGAGGCGAAGCCG ACGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGC TCACTTTGTTCGCTC A1I_04680 886164 - 885181 - | octaprenyl-diphosphate synthase A1I_04685 887834 - 886164 - | hypothetical protein TERM 851 887834 - 887852 + g 73 -7.6 -3.66148 | opp_overlap 887849, overlap 887832 TTAAAGTTTTTTTCA TTTCTTTA AAT TAAAGAAA TATTTAATTTCATTC A1I_04690 888129 - 887839 - | hypothetical protein A1I_04695 888476 - 888126 - | hypothetical protein TERM 852 888168 - 888181 + g 71 -3.1 -5.16472 | AAATGCTAAATCTAA CTCTT TATT AGGAG TTTTTTGAGATTTTT TERM 853 888568 - 888597 + r 77 -5.9 -4.87665 | CTTGATTGCGGGATC CAGTTAAAAATAC GCTA GTATTTTTTATTG TTTTTCTGGATCCCG A1I_04700 890183 - 888669 - | ATP/ADP translocase TERM 854 890247 - 890208 - R 77 -6 -4.98522 | opp_overlap 890207 AACCTTACATAAAAA TTAAATTCTGTGAATCTT TTTA AATATTCATAGAATCTAA ACTTTTAAATCTCTT A1I_04705 891866 - 890274 - | lipopolysaccharide 1,2-glucosyltransferase RfaJ TERM 855 893135 - 893157 + G 71 -2.1 -5.34309 | opp_overlap 893139, overlap 893139 CAGGTTATATAGTAG TAAATTTTG GCTGG CAAAATTTC TTTTTATTTACTACT TERM 856 893139 - 893153 + G 71 -2.9 -5.12987 | opp_overlap 893139, overlap 893135 TTATATAGTAGTAAA TTTTG GCTGG CAAAA TTTCTTTTTATTTAC A1I_04710 892000 - 893232 + | AmpG A1I_04715 893229 - 893861 + | hypothetical protein A1I_04720 893863 - 894501 + | lysine efflux permease TERM 857 894674 - 894694 + G 83 -11.2 -2.82834 | opp_overlap 894667, overlap 894670 894678 ATAAACAACTTGTCA TGCCGTGA CTTGA TCACGGCA TCTAGTAATAAGCTA TERM 858 894678 - 894728 + G 79 -10.5 -2.52676 | opp_overlap 894667, overlap 894670 894674 894695 ACAACTTGTCATGCC GTGACTTGATCACGGCATCTAGT AATAA GCTAGATTCTGTGGACAAGTCCC TAGATTACAAACATA A1I_04725 894479 - 895213 + | hypothetical protein TERM 859 896188 - 896171 - g 70 -6.2 -4.26881 | GGTGATAAAACTAAA GCAGGC TCTATT GCCCGC AAGAATTCATCTTGT A1I_04740 895865 - 896839 + | HemY-like protein TERM 860 897026 - 897016 - gf 70 -4 -4.95758 | AGGATATCAGAAAAA TTGA AAA TCAA TCAGAAAATGAATGG A1I_04745 896850 - 897104 + | hypothetical protein TERM 861 897525 - 897555 + GF 81 -7.1 -4.68593 | opp_overlap 897528, overlap 897528 TAGCAGTAAAATTGC AAATACTAATACT GTTGA AGTATTAGTATTA TTTTTAGATAATGAA TERM 862 897552 - 897528 - gf 80 -8.8 -3.77484 | opp_overlap 897525 897528 CAGTAAAATTGCAAA TACTAATACT GTTGA AGTATTAGTA TTATTTTTAGATAAT TERM 863 897528 - 897552 + GF 88 -8.8 -4.4521 | opp_overlap 897528, overlap 897525 CAGTAAAATTGCAAA TACTAATACT GTTGA AGTATTAGTA TTATTTTTAGATAAT TERM 864 897831 - 897813 - gf 71 -3.2 -5.28778 | AGTAGCTATAAAAAA TAATAATG TTT CAGTATTA AATCTTTTAGTAAAT A1I_04750 897061 - 898428 + | hypothetical protein TERM 865 898466 - 898488 + G 100 -12.8 -3.02459 | opp_overlap 898466, overlap 898461 898468 CTACAACAAAAAAAA TAGGAGCCGT TAC ATGGCTCCTA TATCATTCTTGCGTA TERM 866 898488 - 898466 - g 100 -10.6 -6.17268 | opp_overlap 898466 898461 898468 CTACAACAAAAAAAA TAGGAGCCGT TAC ATGGCTCCTA TATCATTCTTGCGTA TERM 867 898468 - 898486 + G 84 -11 -3.06171 | opp_overlap 898466, overlap 898466 898461 ACAACAAAAAAAATA GGAGCCGT TAC ATGGCTCC TATATCATTCTTGCG A1I_04755 898429 - 898551 + | isopentenyl pyrophosphate isomerase A1I_04760 899574 - 898543 - | isopentenyl pyrophosphate isomerase TERM 868 898738 - 898719 - G 70 -4.3 -4.87626 | CGGCAAGACCAAAAA TATCCGC TCCCAT GCGAATA GCTTTAGCCCCGTCA TERM 869 899304 - 899264 - G 80 -9.1 -3.70076 | overlap 899267 899288 GTAAATGTATCTAAA GTACTTGGTTCTGTAAGTA ATG TACGCATAGAACCAAGTCC CATAGCGATACCTGC TERM 870 899301 - 899267 - G 75 -9.4 -2.94888 | overlap 899264 899288 AATGTATCTAAAGTA CTTGGTTCTGTAAGTA ATG TACGCATAGAACCAAG TCCCATAGCGATACC nrdF 901148 - 900174 - | ribonucleotide-diphosphate reductase subunit beta TERM 871 900473 - 900457 - G 79 -8.1 -4.1196 | overlap 900446 AACGCATCTTCAAAA TGTACAA TAG TTGTACA AGCTTTATAGATACG TERM 872 901297 - 901270 - R 78 -10 -3.20858 | opp_overlap 901265 901286, overlap 901274 GAGCATAGCGACGAA GCAATCTCAGAA ACCC TTATGAGATTGC AACGCTCCTTGCAGT A1I_04770 903160 - 901337 - | ribonucleotide-diphosphate reductase subunit alpha TERM 873 901875 - 901891 + g 74 -7.3 -3.97413 | opp_overlap 901875, overlap 901873 901890 ATCACTGAAATTGAA GCAGTAG GAG CTATTGC TGTTTTATTACTAAA TERM 874 902035 - 902047 + g 71 -7.7 -3.47392 | opp_overlap 902035, overlap 902033 AAACCTTTGCCATAA CCGAT TCT ATCGG TACTTTTTTCATTTG TERM 875 902705 - 902682 - G 70 -8.2 -3.01924 | overlap 902684 902702 GAGCCTCGTCTAATA GACCCTTG AGAAATAG CAAGGGTC ATAGAATCCATTACC TERM 876 902740 - 902730 - G 71 -5.4 -4.66318 | opp_overlap 902719 ATTACCTTAATAAAA GGTA TAA TACC CGATGAATGCCCTTT A1I_04775 903868 - 903329 - | hypothetical protein A1I_04780 904204 - 903938 - | integration host factor beta-subunit A1I_04785 905093 - 904170 - | Signal peptide peptidase SppA, 36K type TERM 877 905187 - 905203 + r 90 -4.5 -5.77677 | opp_overlap 905187 GATCCAGTTAAAAAA TACTGAT AAA ATTAGTA TTTTTTATTATTTTC rho 906701 - 905352 - | transcription termination factor Rho TERM 878 906243 - 906261 + g 88 -9 -4.27211 | opp_overlap 906242 GACACGGTGATAAGC TTTTGAAG GAT CTTCAAAA TTTACTTTATTTACC A1I_04795 907859 - 907059 - | Thiol:disulfide interchange protein dsbA TERM 879 907998 - 907970 - R 77 -5.5 -4.87665 | CGGGATCCAGAAAAA CAATAAAAAATAT TAT ATATTTTTTCCTG GACCCCGTGAATAAA smpB 908497 - 908042 - | SsrA-binding protein A1I_04805 909381 - 908497 - | dihydrodipicolinate synthase A1I_04810 909539 - 909378 - | branched-chain amino acid aminotransferase TERM 880 909533 - 909516 - G 86 -11.3 -2.62616 | GTATTTTTTACAGGA TTCCCGC CTAC GCGGGAA TGACATACTACCCCC A1I_04815 910410 - 909541 - | branched-chain amino acid aminotransferase TERM 881 910570 - 910585 + H 71 -7.6 -3.39618 | overlap 910537 910569 GGACAAGCCACGGGA TGACAG AACA CTGTCA ATTTTTCAAATTAAA A1I_04820 910610 - 911290 + | PetR A1I_04825 911274 - 912593 + | osmolarity sensor protein EnvZ A1I_04830 912873 - 913553 + | undecaprenyl pyrophosphate synthetase TERM 882 913576 - 913561 - gf 82 -4.8 -5.48623 | AAAGATAAACAAAAA TCAAAT TTAT ATTTGA GGATACTATCAGGGA TERM 883 913580 - 913596 + GF 70 -8.1 -3.17956 | opp_overlap 913582, overlap 913590 ATTTATATTTGAGGA TACTATC AGG GATAGTA TTAGTACCATCATTT A1I_04835 913513 - 914208 + | phosphatidate cytidylyltransferase TERM 884 914310 - 914330 + G 71 -8.4 -3.36694 | overlap 914307 TTTCACTGCATTTAC GGCAATAA AGGAG TTATTGCC TATTTAAAAGTAAAT A1I_04840 914205 - 914531 + | septum formation initiator TERM 885 914707 - 914719 + G 71 -7.7 -3.543 | opp_overlap 914707 914706, overlap 914712 TTTAGTAACGGAAAT GGTGA TGC TCACC TTGTGCATTTTCTAA A1I_04845 914572 - 915183 + | ribonuclease D A1I_04850 915679 - 915395 - | hypothetical protein A1I_04855 916213 - 915755 - | hypothetical protein A1I_04860 916364 - 916687 + | Sodium/pantothenate symporter A1I_04865 916696 - 917742 + | Sodium/pantothenate symporter A1I_04870 918895 - 917729 - | Fic family protein TERM 886 918756 - 918766 + g 71 -5.4 -4.60041 | TTTAACTCTGCAAGT GCTA AGG TAGC TTTTTCAAGGTGAGT A1I_04875 920149 - 919055 - | Fic family protein TERM 887 920162 - 920208 + r 82 -6.2 -5.1963 | opp_overlap 920149 920161, overlap 920149 920163 CATGAGCTATAAATG TTTACTTTATAACTCATATTAT AGC ATATTTTGAGTTATAAAATAAG TTTTTATTACTTGGA TERM 888 920163 - 920207 + r 71 -7.5 -3.70694 | opp_overlap 920149 920161, overlap 920149 920162 ATGAGCTATAAATGT TTACTTTATAACTCATATTAT AGC ATATTTTGAGTTATAAAATAA GTTTTTATTACTTGG A1I_04880 920528 - 920262 - | hypothetical protein A1I_04885 920681 - 921592 + | hypothetical protein A1I_04890 921577 - 923298 + | glycosyltransferase A1I_04895 923822 - 923472 - | growth inhibitor A1I_04900 924048 - 923812 - | hypothetical protein A1I_04905 924200 - 925357 + | Phage portal protein A1I_04910 925354 - 925641 + | hypothetical protein TERM 889 926627 - 926606 - T 71 -7.3 -3.80114 | opp_overlap 926617, overlap 926618 CATTAATTTAGCAAA TGCAACAGC GAAT GTTGTTGCA ACAGGTTTAATTACC A1I_04925 929775 - 928507 - | ABC-type anion transport system permease component A1I_04930 930202 - 929933 - | ABC-type anion transport system permease component A1I_04935 931213 - 930413 - | hypothetical protein A1I_04940 931690 - 931448 - | exodeoxyribonuclease VII small subunit TERM 890 931739 - 931756 + H 85 -4.9 -5.64006 | overlap 931726 TGCCTCTGTAGTTGT TTGCTGA GGTA TTAGCAA TTTTTTTAATTCACT TERM 891 932639 - 932605 - H 74 -8.1 -3.70438 | overlap 932606 AAATCAGTACTTAAA CTACCATCTTTAATT TCGAC AGTTAAAGATGGTAA TACGCTGGAAGCATC TERM 892 932638 - 932606 - H 74 -9.4 -2.8154 | overlap 932605 AATCAGTACTTAAAC TACCATCTTTAATT TCGAC AGTTAAAGATGGTA ATACGCTGGAAGCAT rimM 934559 - 935059 + | 16S rRNA-processing protein TERM 893 935138 - 935168 + T 84 -8.6 -4.33785 | opp_overlap 935145, overlap 935145 ATGAACTAGAGCCAG TTAAAAATACTAAT TTT ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 894 935145 - 935161 + T 95 -6.7 -5.77677 | opp_overlap 935145, overlap 935138 AGAGCCAGTTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC TERM 895 935161 - 935145 - T 78 -6.7 -4.67755 | opp_overlap 935145 935138 AGAGCCAGTTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC TERM 896 935200 - 935210 + T 78 -6.8 -4.53705 | opp_overlap 935200 GTTCCCAAGCAACGA CACC GAG GGTG TTTTCTATCCACGTT A1I_04960 938628 - 935245 - | cell surface antigen Sca4 A1I_04965 940268 - 938706 - | ATP/ADP translocase truB 940341 - 941222 + | tRNA pseudouridine synthase B rpsO 941244 - 941519 + | 30S ribosomal protein S15 TERM 897 941891 - 941914 + G 91 -8.2 -5.03314 | gap 1 AGAGAAATGGCATAT GCTG-CTGGTA AAA TACCAGGCGGC TTTTTTAAGCGTGAG A1I_04980 941687 - 943921 + | polynucleotide phosphorylase/polyadenylase TERM 898 944044 - 944014 - f 84 -8.6 -4.33182 | opp_overlap 944021, overlap 944021 GCATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATTCCGTGAAT TERM 899 944037 - 944021 - f 95 -6.7 -5.77677 | opp_overlap 944021, overlap 944014 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC TERM 900 944021 - 944037 + F 78 -6.7 -4.68424 | opp_overlap 944014 944021 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC A1I_04985 944172 - 945131 + | KpsF A1I_04990 945135 - 945728 + | hypothetical protein A1I_04995 945709 - 946149 + | hypothetical protein A1I_05000 946150 - 946872 + | ABC transporter ATP-binding protein A1I_05005 947113 - 948528 + | phosphomannomutase A1I_05015 950295 - 949420 - | hypothetical protein miaA 948529 - 949476 + | tRNA delta(2)-isopentenylpyrophosphate transferase A1I_05020 950457 - 951839 + | NADH dehydrogenase subunit N A1I_05025 951846 - 952646 + | biotin-(acetyl-CoA carboxylase) ligase A1I_05030 953139 - 953780 + | hypothetical protein A1I_05035 953823 - 954644 + | hypothetical protein TERM 901 955017 - 954996 - g 80 -5.3 -5.19916 | gap 1 AAAAGATTTAAAAAA TTTAGC-CAA AGA TTGTGCTAAA ACTATTAAAAATACC A1I_05040 954658 - 955791 + | hypothetical protein A1I_05045 956054 - 956572 + | hypothetical protein A1I_05050 957511 - 956804 - | putative hydrolase TERM 902 957432 - 957454 + g 74 -7 -4.28375 | opp_overlap 957433, overlap 957433 TGAAGAACCAATGCA ACAGGAGCAT TAT ATGCTTCTGC TTTTACATATATTCC TERM 903 957433 - 957453 + g 83 -10.5 -3.16302 | opp_overlap 957433, overlap 957432 GAAGAACCAATGCAA CAGGAGCAT TAT ATGCTTCTG CTTTTACATATATTC TERM 904 957453 - 957433 - G 71 -8.3 -3.26428 | opp_overlap 957432 957433 GAAGAACCAATGCAA CAGGAGCAT TAT ATGCTTCTG CTTTTACATATATTC TERM 905 957622 - 957572 - R 93 -11.4 -3.60296 | gap 2, opp_overlap 957574 CATTGCGAGCGGAAA CTTTATCACCCTGTCATCCCGTGG TCAAG CCACGGGATGACAGA--GACGAAG CTGATCTACGCAGGC A1I_05055 957917 - 957663 - | AtsE-like protein A1I_05060 958103 - 957978 - | hypothetical protein TERM 906 958205 - 958180 - R 81 -8.5 -4.23794 | opp_overlap 958180 958182 958187, overlap 958187 CTAATTTAATACAAA TAACAAATTAC ATTA GTAATTTGCTA TTGAGTAAGTATTAA A1I_05065 958792 - 958217 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase A1I_05070 959143 - 960129 + | tryptophanyl-tRNA synthetase A1I_05095 964477 - 963182 - | hypothetical protein TERM 907 963629 - 963647 + g 71 -7.5 -3.48593 | CTTTTTTACATCTAT TTCCTCT TTATT AGAGGAA TTATATAAAGCGATA TERM 908 964639 - 964614 - R 70 -3.5 -5.17507 | opp_overlap 964608, overlap 964608 AAAAGTCAATAAAAA TTTTTTATATT ACAT AAAATAAAAAA ATATAGGAGGAGTAT TERM 909 964942 - 964914 - R 81 -10.4 -3.20858 | opp_overlap 964908 964906, overlap 964918 GAGCATAGCGACGAA GCAATCTCAGGA CACTT TCATGAGATTGC CACGCTCCTTTTAAT A1I_05100 967701 - 964984 - | DNA gyrase subunit A TERM 910 965123 - 965105 - G 85 -8.2 -4.44046 | TCTAGTCTAAATAAA GTAACACC GCT AGTGTTAC GCCCTGTAATACGTA A1I_05105 968245 - 969120 + | hypothetical protein A1I_05110 969493 - 969891 + | hypothetical protein A1I_05115 972263 - 969936 - | ATP-dependent protease La TERM 911 970087 - 970098 + g 72 -5.8 -4.41047 | overlap 970086 970085 ATCCCTCCTCTACTT GCTG CTAG CAGC TTTTCCTTAAGACCT TERM 912 972230 - 972251 + g 74 -2.9 -5.5112 | overlap 972231 972234 ATACTACTATATCTC GCAGTGCCA TTAA TGGCAGTGA TTTTTTATTCATCAA TERM 913 973261 - 973233 - g 82 -7.5 -4.60924 | TAAACTGGTTAAAAA CACAAACAACTCC TAA AAAGCTGCTTGTG TTAATATCCGGCGGT A1I_05120 972350 - 973351 + | threonine dehydratase A1I_05125 973667 - 973335 - | hypothetical protein TERM 914 973484 - 973496 + g 79 -4.9 -5.16572 | CTACGGAATCATCTA TATCT AGT AGATA TTTTTTAAATTCAGT A1I_05130 973938 - 974402 + | threonine dehydratase-like protein A1I_05135 976733 - 974433 - | ankyrin repeat-containing protein TERM 915 976075 - 976092 + g 71 -7.7 -3.53174 | overlap 976058 976072 976076 TCAGGAAAATTATAT TCCGGAA ATAG TTCCGGG TATTTATCGACATAT TERM 916 976076 - 976091 + g 72 -9 -2.71422 | overlap 976058 976075 976072 CAGGAAAATTATATT CCGGAA ATAG TTCCGG GTATTTATCGACATA TERM 917 977920 - 977884 - g 90 -10.2 -4.08767 | opp_overlap 977887, overlap 977909 GTCATTCCCGCAAAA GCGGGAATCCAGAAAA AAAAA TCTACTGGATTCCTGC TTCCGCAGGAATGAC TERM 918 978225 - 978197 - g 100 -12.1 -5.0666 | opp_overlap 978203, overlap 978203 TATCCAAAAAATAAA TAAAAATATCAAT ATT ATTGATATTTTTA ACTGGATCCCGCAAT TERM 919 978219 - 978203 - g 100 -6.7 -5.63012 | opp_overlap 978203, overlap 978197 AAAAATAAATAAAAA TATCAAT ATT ATTGATA TTTTTAACTGGATCC TERM 920 978203 - 978219 + G 79 -6.7 -4.67353 | opp_overlap 978203 978197 AAAAATAAATAAAAA TATCAAT ATT ATTGATA TTTTTAACTGGATCC A1I_05140 976896 - 978497 + | hypothetical protein folE 978487 - 979065 + | GTP cyclohydrolase I TERM 921 979296 - 979256 - g 86 -9.8 -3.99957 | opp_overlap 979254 TCAAATATGGATAAA GCTGGTTGTCTAGAAGTC TTAAT GCCTTGTATACAACCAGC ACATTTATGGGTAGA TERM 922 979806 - 979794 - g 82 -4.8 -5.47159 | TTGAAGAAATAAAAA GCTG GTATG CAGC TGCTGAAGAGAAGCA A1I_05150 979067 - 980365 + | prolyl-tRNA synthetase TERM 923 980942 - 980970 + G 81 -8.9 -3.90112 | opp_overlap 980949, overlap 980945 980946 GTAGCGTCAGTAATT GGAACTACAGCAG CAC TTGCTGTAGCTTC TTTAGTTACCACACA TERM 924 980945 - 980967 + G 71 -7 -4.0825 | opp_overlap 980949, overlap 980942 980946 GCGTCAGTAATTGGA ACTACAGCAG CAC TTGCTGTAGC TTCTTTAGTTACCAC TERM 925 980946 - 980966 + G 83 -10.5 -3.04468 | opp_overlap 980949, overlap 980945 980942 CGTCAGTAATTGGAA CTACAGCAG CAC TTGCTGTAG CTTCTTTAGTTACCA A1I_05155 980444 - 981751 + | proline/betaine transporter A1I_05160 982394 - 981753 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 926 982489 - 982460 - R 100 -13.7 -3.74693 | overlap 982462 TTCTAGGTTAGCAAA TAGTCTTCTAGGG CAAG CCCTAGAAGACTC GAACCTAAAGTTTGT TERM 927 982487 - 982462 - R 100 -16.3 -3.4582 | overlap 982460 CTAGGTTAGCAAATA GTCTTCTAGGG CAAG CCCTAGAAGAC TCGAACCTAAAGTTT A1I_05165 982958 - 982494 - | Holliday junction resolvase-like protein TERM 928 983030 - 983011 - g 73 -4.4 -5.07567 | opp_overlap 983011 TTATATGCTAAAAAA TATCCAAA AACA TTTAGATA TTAAATTAATTAAAT TERM 929 983646 - 983664 + G 87 -10.4 -3.7574 | opp_overlap 983645 983644, overlap 983644 ATTTCGTCGATAATT CCGATAAT GAT ATTATCGG TGTTTTAGTCATAGG A1I_05170 983000 - 984568 + | putative membrane-associated metal-dependent hydrolase cyaY 984863 - 984573 - | frataxin-like protein A1I_05180 985875 - 984856 - | aminodeoxychorismate lyase A1I_05185 986303 - 986596 + | hypothetical protein lpxB 987733 - 986588 - | lipid-A-disaccharide synthase A1I_05205 990237 - 988723 - | Mg chelatase-related protein hslU 991631 - 990273 - | ATP-dependent protease ATP-binding subunit TERM 930 991583 - 991595 + g 85 -4.7 -5.54885 | TTTGAGAAGGTGTAA GCCCC ATA GGGTC TTTTTTATTAGTATT A1I_05215 992176 - 991628 - | ATP-dependent protease peptidase subunit A1I_05220 992313 - 992669 + | hypothetical protein A1I_05225 992659 - 993012 + | protein kinase C inhibitor 1 A1I_05230 993015 - 994031 + | aspartate-semialdehyde dehydrogenase TERM 931 994036 - 994022 - f 70 -4.4 -4.9445 | opp_overlap 994012 994022, overlap 994012 AGAATTAATTAAAAA TTATTT ATA AAATAA TTAATATGGATAATA A1I_05235 994042 - 995799 + | alkaline protease secretion ATP-binding protein AprD TERM 932 996078 - 996066 - g 79 -4.9 -5.23316 | TAGCACATTAAAAAA TACTT CAC AAGTA ATAGAATTTTTACTG A1I_05240 995929 - 997461 + | alkaline protease secretion protein AprE A1I_05245 997605 - 998765 + | hypothetical protein A1I_05250 999001 - 999246 + | putative monovalent cation/H+ antiporter subunit G TERM 933 999361 - 999391 + F 84 -8.6 -4.22214 | opp_overlap 999368, overlap 999368 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCCCTGGAT TERM 934 999368 - 999384 + F 95 -6.7 -5.77677 | opp_overlap 999368, overlap 999361 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 935 999384 - 999368 - f 78 -6.7 -4.67755 | opp_overlap 999368 999361 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_05255 999535 - 999846 + | putative monovalent cation/H+ antiporter subunit G TERM 936 1000130 - 1000116 - gf 72 -5 -4.74103 | CCTCTAATTTAAAAA TAATCC AAA GGACTA AAATTATTCCGGCAA A1I_05260 999851 - 1000861 + | putative monovalent cation/H+ antiporter subunit B TERM 937 1000923 - 1000934 + GF 78 -3 -5.65678 | opp_overlap 1000923 AATAATATGATTAAA TATC TAAT GATA TTTTTTCTATTTTGT A1I_05265 1000812 - 1001501 + | Heme exporter protein B A1I_05270 1001570 - 1002013 + | hypothetical protein A1I_05275 1002016 - 1002576 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit A1I_05280 1002583 - 1003785 + | cytochrome b A1I_05285 1004059 - 1004814 + | cytochrome c1, heme protein precursor A1I_05290 1006037 - 1005120 - | hypothetical protein A1I_05295 1006352 - 1006071 - | hypothetical protein A1I_05300 1006722 - 1006558 - | transposase A1I_05305 1007515 - 1006709 - | transposase TERM 938 1007673 - 1007692 + r 76 -9.4 -3.06087 | opp_overlap 1007673, overlap 1007665 1007661 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 939 1007692 - 1007673 - R 75 -9.4 -3.01924 | opp_overlap 1007673 1007665 1007661 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 940 1008176 - 1008195 + r 73 -9.2 -2.65808 | opp_overlap 1008172 1008176, overlap 1008173 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 941 1008195 - 1008176 - R 85 -11.4 -2.5602 | opp_overlap 1008176 1008173, overlap 1008172 TAAGGAGGTAATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 942 1009589 - 1009566 - R 81 -10.4 -3.14132 | opp_overlap 1009566 1009570, overlap 1009570 CCCGTCTGCCACTAA CTAATTGGAG CAAG CCCCAATTAG TCCGTTCGACTTGCA TERM 943 1009633 - 1009670 + r 78 -6.6 -4.54727 | gap 2, overlap 1009636 1009639 1009644 1009663 CCGATAGCGTTCGTT CTGAGCCAGGATCAAACT CTCA AGTTTGATTCTG--TCAG TTTTACTTTAAAAAA TERM 944 1009639 - 1009666 + r 100 -12.2 -2.82666 | overlap 1009636 1009633 1009644 1009663 GCGTTCGTTCTGAGC CAGGATCAAACT CTCA AGTTTGATTCTG TCAGTTTTACTTTAA TERM 945 1009663 - 1009693 + r 76 -7.8 -4.02542 | overlap 1009639 1009636 1009633 ACTCTCAAGTTTGAT TCTGTCAGTTTT ACTTTAA AAAATTGACAGA TTTAATTATCACTTT A1I_05310 1010580 - 1010026 - | hypothetical protein A1I_05315 1012716 - 1010704 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase A1I_05320 1012876 - 1013070 + | hypothetical protein A1I_05325 1014956 - 1013124 - | nitrogen regulation protein NtrY TERM 946 1015081 - 1015040 - R 100 -12.5 -3.57418 | gap 1, opp_overlap 1015080, overlap 1015036 1015041 1015073 GAGCGACCAAAGGAA GCGTGGCAATCTCATGAAGT AGA ACTCC-TAAGATTGCCACGT CGAGGCTTCGCCTCT TERM 947 1015080 - 1015041 - R 100 -16 -2.73969 | gap 1, overlap 1015040 1015036 1015073 AGCGACCAAAGGAAG CGTGGCAATCTCATGAAGT AGA ACTCC-TAAGATTGCCACG TCGAGGCTTCGCCTC TERM 948 1015083 - 1015095 + r 76 -9.1 -3.15544 | opp_overlap 1015073, overlap 1015080 TAAGATTGCCACGTC GAGGC TTC GCCTC TTCCTCGCAATGACG TERM 949 1015167 - 1015200 + r 87 -11.3 -3.0439 | opp_overlap 1015172, overlap 1015172 TGACTATAATAACAA AAAAAGCTAGAAATA CCAC TATTTCTAGCTTTTA TGCTTTCTAATAAAT TERM 950 1015172 - 1015195 + r 100 -11.2 -4.64846 | opp_overlap 1015172, overlap 1015167 ATAATAACAAAAAAA GCTAGAAATA CCAC TATTTCTAGC TTTTATGCTTTCTAA TERM 951 1015195 - 1015172 - R 100 -11.2 -5.97979 | opp_overlap 1015172 1015167 ATAATAACAAAAAAA GCTAGAAATA CCAC TATTTCTAGC TTTTATGCTTTCTAA A1I_05330 1017225 - 1015228 - | Acetyl-CoA carboxylase, biotin carboxylase TERM 952 1015823 - 1015812 - G 81 -4.4 -5.4433 | ATATATAAATAAAAA TAGC GGTT GCTA AAAATACTCCTGTTA A1I_05335 1017701 - 1017318 - | hypothetical protein A1I_05340 1019399 - 1017855 - | propionyl-CoA carboxylase beta chain precursor TERM 953 1018142 - 1018158 + g 78 -9.5 -3.21354 | CATAATTTATATCGC CTCTAAG ATG CTTAGAG TTCATCACTATATAA TERM 954 1018752 - 1018768 + g 73 -8 -3.39895 | overlap 1018729 1018728 GTGCATACGTGCACC GCCAAG TTTCT CTTGGC TTACTTCCTCGCCAG TERM 955 1019337 - 1019347 + g 71 -5.4 -4.6341 | ATCTTCACCACCCCC TTGC CTC GCAA TATTTTTTTTCTCGT A1I_05345 1019474 - 1019608 + | hypothetical protein A1I_05350 1019629 - 1019775 + | hypothetical protein A1I_05355 1020002 - 1020139 + | hypothetical protein A1I_05360 1020261 - 1021460 + | hypothetical protein TERM 956 1023730 - 1023746 + G 83 -6.7 -4.92757 | opp_overlap 1023730, overlap 1023741 AAAGCTACTTATCAA GATTTAA TAC TTAAATC TTTTATTCTTGGTGA A1I_05365 1021813 - 1025157 + | acylglycerophosphoethanolamine acyltransferase A1I_05370 1025262 - 1025606 + | hypothetical protein TERM 957 1025658 - 1025623 - f 75 -9.8 -2.56273 | gap 1, opp_overlap 1025622 1025620 1025623 1025628 ACTATAGTGAATTTA CCATGCGGTCAA-GC CGTGTTT GCATTGCCCGCATGG GTCATTTTTTCCATC TERM 958 1025623 - 1025658 + F 76 -9.8 -2.63182 | gap 1, opp_overlap 1025623, overlap 1025622 1025620 1025628 ACTATAGTGAATTTA CCATGCGGTCAA-GC CGTGTTT GCATTGCCCGCATGG GTCATTTTTTCCATC TERM 959 1025711 - 1025747 + F 100 -9.1 -4.94992 | opp_overlap 1025721, overlap 1025714 1025715 1025721 ATTGACGAAGCAATC TAGTTAAAAATATCAAT AAT ATTGATATTTTTAGTTG TTTTTCTGGATTTCA TERM 960 1025714 - 1025744 + F 100 -10.8 -4.55383 | opp_overlap 1025721, overlap 1025711 1025715 1025721 GACGAAGCAATCTAG TTAAAAATATCAAT AAT ATTGATATTTTTAG TTGTTTTTCTGGATT TERM 961 1025715 - 1025743 + F 95 -12.1 -3.31603 | opp_overlap 1025721, overlap 1025714 1025711 1025721 ACGAAGCAATCTAGT TAAAAATATCAAT AAT ATTGATATTTTTA GTTGTTTTTCTGGAT TERM 962 1025721 - 1025737 + F 83 -6.7 -5.10004 | opp_overlap 1025721, overlap 1025715 1025714 1025711 CAATCTAGTTAAAAA TATCAAT AAT ATTGATA TTTTTAGTTGTTTTT TERM 963 1025737 - 1025721 - f 78 -6.7 -4.68424 | opp_overlap 1025721 1025715 1025714 1025711 CAATCTAGTTAAAAA TATCAAT AAT ATTGATA TTTTTAGTTGTTTTT TERM 964 1026008 - 1025988 - g 78 -9.7 -3.21416 | overlap 1025991 GAGGTTTAGTATTAA CAACCTCGA CAG TCGGGGTTG GAACGGCTCTAGGAA A1I_05375 1025852 - 1026376 + | hypothetical protein A1I_05380 1026892 - 1026329 - | hypothetical protein TERM 965 1026455 - 1026467 + g 72 -4.9 -4.8048 | TTTTTCATAAGTTTT TATAG CTG CTATA TTTTTACTATCAGGC A1I_05385 1027936 - 1026905 - | acetyltransferase A1I_05390 1029186 - 1027963 - | Fic family protein TERM 966 1028873 - 1028883 + g 85 -6.8 -4.98857 | GTAATTTTTACATTT TGGG CTA CCCA TTTTTCTACTTGCGT A1I_05395 1029712 - 1029266 - | hypothetical protein A1I_05400 1030194 - 1029736 - | hypothetical protein gltX 1031781 - 1030270 - | glutamyl-tRNA synthetase TERM 967 1030585 - 1030567 - G 74 -9 -3.0517 | opp_overlap 1030576 1030578 1030579, overlap 1030566 ATTTACTAGATAAAT TTTAGCAA GCT TTGCTAAA TCTAGCAGTGTTTCA TERM 968 1031636 - 1031620 - G 93 -10.1 -4.71061 | ACCTATATGTAAAAA CCCCGTC GGT GACGGAG CAAATCTAGTAATCA TERM 969 1031988 - 1031969 - H 76 -9.4 -3.06087 | opp_overlap 1031969, overlap 1031960 1031958 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCGTA TERM 970 1031969 - 1031988 + H 75 -9.4 -3.01924 | opp_overlap 1031960 1031958 1031969 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCGTA A1I_05410 1032146 - 1032370 + | transposase A1I_05415 1032340 - 1033101 + | transposase TERM 971 1033162 - 1033136 - T 81 -9.5 -3.68569 | gap 1, opp_overlap 1033133 1033130 CGATCCACGCAACAA TGCC-TTCCCGC ATAG GCGGGAATGACA CCGATGTTGCTTTTC A1I_05420 1033926 - 1033204 - | 3-demethylubiquinone-9 3-methyltransferase TERM 972 1034218 - 1034230 + G 72 -3.5 -5.18726 | overlap 1034217 TGCTGGCTATTGCTT TAATT ATT AATTA TTTTTCTTCTGCCCA A1I_05425 1033944 - 1034723 + | Zinc/manganese ABC transporter permease protein TERM 973 1034795 - 1034823 + TF 78 -7 -4.5448 | TGAACTAGAGCCAGT TAAAAAATGCTA ACTTA TAGTATTTTTTA TTATTTTTCTGGATA TERM 974 1035074 - 1035109 + TF 72 -4.8 -4.87803 | opp_overlap 1035079, overlap 1035079 ACGTTACACATAACA AAAAAGGCAAGCTATT TAAT AATAACTTGCCTTTCA TTTTATTTGAAACTA TERM 975 1035079 - 1035104 + TF 100 -9.1 -4.37871 | opp_overlap 1035079, overlap 1035074 ACACATAACAAAAAA GGCAAGCTATT TAAT AATAACTTGCC TTTCATTTTATTTGA TERM 976 1035104 - 1035079 - Tf 100 -11.3 -5.62045 | opp_overlap 1035079 1035074 ACACATAACAAAAAA GGCAAGCTATT TAAT AATAACTTGCC TTTCATTTTATTTGA rpsU 1035431 - 1035135 - | 30S ribosomal protein S21 A1I_05435 1035420 - 1036031 + | hypothetical protein TERM 977 1036300 - 1036272 - TR 87 -8.4 -4.73105 | overlap 1036279 1036288 ATCCAGAAAAAATAA TAAAAAATGCTA TAAGT CAGCATTTTTTA GCTGAATTGCGTATG TERM 978 1036293 - 1036279 - TR 80 -2.1 -5.80727 | overlap 1036272 1036288 AAAAATAATAAAAAA TGCTA TAAGT CAGCA TTTTTTAGCTGAATT A1I_05440 1037097 - 1036432 - | hypothetical protein TERM 979 1037147 - 1037170 + r 81 -4.8 -5.34632 | gap 1, opp_overlap 1037147 1037150, overlap 1037152 CAATATCCGAAATGA TAATT-CAACT ATT AGTTGTAATTA TTTTTATATTTTATT A1I_05445 1037771 - 1037532 - | hypothetical protein A1I_05450 1038761 - 1037955 - | hypothetical protein TERM 980 1038125 - 1038137 + g 72 -4.9 -4.75776 | overlap 1038130 TGGGATAAAAGACTT TCTTT TTC AAAGA TTTTTGAATTCGCTT TERM 981 1038607 - 1038593 - G 71 -2.9 -5.26316 | opp_overlap 1038601, overlap 1038601 TGACTCCATAAAAAA CTAAA CTATC TTTAG TTGGACTAAAAAATT A1I_05455 1039047 - 1038826 - | hypothetical protein A1I_05460 1039919 - 1039092 - | biotin-protein ligase TERM 982 1039442 - 1039452 + g 74 -5.4 -4.80453 | overlap 1039433 TGAGTAGTGCAGCCT TAGC TCC GCTA TTTGTTTTATAATCA TERM 983 1039680 - 1039693 + g 71 -8.1 -3.21099 | AGTATAAGGTATATC TGCCC CACC GGGCA TTACTAATAAAACAG TERM 984 1040988 - 1040972 - g 70 -3.8 -5.10154 | ATCGAAAAGCAAAAA TAAAAG AAAAA CTTTTA GAACAGGAAGCTACA TERM 985 1041426 - 1041405 - g 70 -3.9 -4.98672 | gap 1, opp_overlap 1041408 1041410, overlap 1041407 1041408 TGGAAAAATAGAAAA TAGTACTAGT TAT ACTAGTA-TA ATTAAAATGATAAGT TERM 986 1041424 - 1041408 - g 70 -8.1 -3.03187 | opp_overlap 1041408 1041410, overlap 1041407 1041405 AAAAATAGAAAATAG TACTAGT TAT ACTAGTA TAATTAAAATGATAA A1I_05465 1040281 - 1042392 + | hypothetical protein A1I_05470 1042974 - 1042516 - | hypothetical protein TERM 987 1043210 - 1043190 - H 76 -9.9 -2.79718 | opp_overlap 1043190, overlap 1043187 1043189 TAAGCCCCAAAACAG TTTTAACTG CTT CAGTTAAAA TTTATACTTAACTCC TERM 988 1043190 - 1043210 + H 91 -9.9 -4.06904 | opp_overlap 1043187 1043190 1043189 TAAGCCCCAAAACAG TTTTAACTG CTT CAGTTAAAA TTTATACTTAACTCC A1I_05475 1043344 - 1044201 + | ubiquinone/menaquinone biosynthesis methlytransferase UbiE A1I_05480 1045487 - 1044555 - | thioredoxin reductase A1I_05485 1046376 - 1045507 - | putative hydrolase/acyltransferase TERM 989 1046048 - 1046061 + g 85 -2.4 -6.20267 | opp_overlap 1046048 CCGCCCATTGAAGTA CCTA GCCAAA TAGG TTTTTTTATTTTTAA A1I_05490 1047315 - 1046386 - | putative permease TERM 990 1047221 - 1047209 - G 74 -6.3 -4.35992 | opp_overlap 1047209, overlap 1047206 TAGAATAATAAAGAA GAGAT GCT ATCTC TTTCAACATTTGAGT A1I_05495 1047527 - 1047697 + | hypothetical protein A1I_05500 1047778 - 1048047 + | hypothetical protein A1I_05505 1048174 - 1048368 + | hypothetical protein A1I_05510 1048334 - 1048537 + | hypothetical protein TERM 991 1048639 - 1048629 - gf 91 -5.4 -5.80248 | GAAGAGAGAAAAAAA GCAA AAT TTGC AATAATACTAGTAAG TERM 992 1048830 - 1048815 - gf 74 -6.2 -4.45485 | ATGACAGCTATAAAA TTTGCT AAGC AGCAAA AGGAAATAGTAGCAA TERM 993 1050025 - 1050051 + GF 74 -3.1 -5.40072 | overlap 1050027 TTGCCGAAAAAAGGC GATTAGTAAAT TTAGT ATTTGCTAACC TTTTTTTAAACGGCG A1I_05515 1048611 - 1050350 + | cassette chromosome recombinase B A1I_05520 1050308 - 1051453 + | integrase TERM 994 1052779 - 1052802 + G 71 -3.2 -5.27477 | overlap 1052780 AAAGAATACATACCC TCATGTTGAT ATTG ATCAATATGC TTTTTTGGTTAGAAT A1I_05525 1051493 - 1053277 + | leucine-rich repeat-containing protein A1I_05530 1053459 - 1053292 - | hypothetical protein A1I_05535 1053685 - 1053993 + | hypothetical protein A1I_05540 1053993 - 1054544 + | conjugative transfer protein TraE A1I_05545 1054544 - 1054999 + | hypothetical protein A1I_05550 1054959 - 1055291 + | hypothetical protein A1I_05555 1055317 - 1056735 + | F pilus assembly protein TraB A1I_05560 1056735 - 1056989 + | conjugative transfer protein TraV TERM 995 1057555 - 1057565 + G 77 -4 -5.42975 | TTATCTGAGCAGATT TTAC CTG GTAA TTTTTCTTTATATGA TERM 996 1059239 - 1059223 - g 72 -8.7 -2.99596 | opp_overlap 1059222 TTTAAAGCAATGAGA GCAAGCC CTA AGCTTGC AGGTTTTGTCGATGA A1I_05565 1056973 - 1059504 + | conjugative transfer protein TraC A1I_05570 1059757 - 1060440 + | conjugative transfer protein TraW A1I_05575 1060506 - 1060712 + | hypothetical protein A1I_05580 1060727 - 1061683 + | conjugal DNA transfer protein TraU A1I_05585 1061728 - 1062162 + | conjugative transfer protein TrbC TERM 997 1063312 - 1063302 - g 93 -6.8 -5.37345 | opp_overlap 1063301 TCTAATGAGAAAAAA GAGC TTA GCTC CTCTATAGCAGGATC A1I_05590 1062159 - 1063970 + | conjugative transfer protein TraN A1I_05595 1064041 - 1064874 + | F pilus assembly protein TraF A1I_05600 1064864 - 1066198 + | F pilus assembly protein TraH TERM 998 1068668 - 1068657 - g 70 -4.4 -4.90778 | opp_overlap 1068657, overlap 1068652 TCCATCTAAAGAAAA CTTG CGAT CAAG TTTTGATAAAAATAC A1I_05605 1066276 - 1068993 + | conjugative transfer protein TraG TERM 999 1069950 - 1069926 - g 77 -8.8 -3.57816 | opp_overlap 1069930 AATATCAAGAAGCAA TTAATAGCTA TGATC TAGCTATTAA GTATAAATCTGATTA A1I_05610 1068980 - 1070173 + | TPR repeat-containing protein A1I_05615 1070178 - 1071866 + | putative conjugative transfer protein TraD A1I_05620 1073445 - 1072378 - | transposase A1I_05625 1077641 - 1073490 - | conjugal transfer protein TraA TERM 1000 1075291 - 1075307 + g 75 -9.5 -2.79321 | overlap 1075287 GTGCTTCTTAGGATT TCTGCTA CCT TAGCAGA TGATCTTGATCTCAC TERM 1001 1077744 - 1077729 - H 70 -6.2 -4.17987 | opp_overlap 1077729 1077727 1077726, overlap 1077726 CAAATAAGCAAATAA TAAACC TTCA GGTTTA TATATTGCGTTAACC A1I_05630 1078183 - 1078461 + | conjugal transfer protein TraD A1I_05635 1079324 - 1078677 - | guanosine polyphosphate pyrophosphohydrolase/synthetase A1I_05640 1079720 - 1079866 + | hypothetical protein A1I_05645 1080298 - 1081356 + | hypothetical protein TERM 1002 1081925 - 1081944 + G 77 -8.6 -3.65812 | opp_overlap 1081937 1081941 GGATATTTACCCTTA GCACTAGT ACAA GCTAGTGC TTATATTAAGCAAAA TERM 1003 1082009 - 1082028 + G 73 -4.4 -5.00616 | opp_overlap 1082009 1082015 1082026 AAGAAGTATGAATCA GAATTATT ATCA GATAATTC TTTTTTAGAAGAGAC A1I_05650 1081382 - 1083250 + | hypothetical protein A1I_05655 1084369 - 1083623 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 1004 1084152 - 1084165 + g 75 -2.4 -5.52347 | overlap 1084147 CCATGATACTTTTTA GCAA AATAAA TTGC TTTTTTAATTTTATT A1I_05660 1085430 - 1084480 - | Signal transduction histidine kinase TERM 1005 1084828 - 1084849 + g 72 -8.9 -2.70232 | opp_overlap 1084828, overlap 1084820 1084830 1084833 ACCTTCTTTAGTAAA GTTAATAGA ATTA TCTATTAAC TGCTCTAATATTGCC TERM 1006 1084849 - 1084828 - G 80 -8.9 -3.72695 | opp_overlap 1084828 1084820 1084830 1084833 ACCTTCTTTAGTAAA GTTAATAGA ATTA TCTATTAAC TGCTCTAATATTGCC TERM 1007 1085177 - 1085163 - G 79 -5 -5.30155 | opp_overlap 1085163, overlap 1085165 TTACTAATGAAAAAA TCCCAT TAC ATGGAA TCTTTAATCCATGTA TERM 1008 1086292 - 1086315 + G 77 -9 -3.37299 | gap 1, opp_overlap 1086291 1086289 1086292, overlap 1086291 1086305 TCTCGATTAAAACAG TGTAGTCAGCT TTT AGCTGAC-ACA TCTATTTGTGCTATG TERM 1009 1086315 - 1086292 - g 73 -9 -2.83504 | gap 1, opp_overlap 1086292 1086291 1086305, overlap 1086291 1086289 TCTCGATTAAAACAG TGTAGTCAGCT TTT AGCTGAC-ACA TCTATTTGTGCTATG A1I_05665 1085824 - 1086636 + | site-specific DNA adenine methylase A1I_05670 1088347 - 1086638 - | hypothetical protein TERM 1010 1087786 - 1087808 + g 81 -4.3 -5.35721 | opp_overlap 1087775 1087777 AAATTATAGATTTGC TATATCTAG ATTTA TTAGATATA TTTTTATTATTATCT TERM 1011 1087871 - 1087910 + g 95 -5.8 -5.79588 | TTGAGGCAAAATTTC TTTGGGTTTCACCCCAAA TTTA TTTTGAGTTAAGCCCAAA TTTTTTTCATTTTCA TERM 1012 1087965 - 1087946 - G 74 -6.4 -4.37658 | opp_overlap 1087948 AATTTTTTGAGAAAA TGGCTGGA AATT TCTAGCCA GCTTAATACAAGGAG cmk 1088663 - 1089316 + | cytidylate kinase TERM 1013 1089512 - 1089482 - f 84 -8.6 -4.33182 | opp_overlap 1089489, overlap 1089489 GGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1014 1089505 - 1089489 - f 95 -6.7 -5.77677 | opp_overlap 1089489, overlap 1089482 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1015 1089489 - 1089505 + F 78 -6.7 -4.67353 | opp_overlap 1089489 1089482 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1016 1089588 - 1089604 + F 89 -6.7 -5.45652 | CCACGGTATGACAGT GATATTT GGA AAATATC TTTTTTATTAACCCT TERM 1017 1090570 - 1090556 - g 81 -4.3 -5.40072 | CTGTCGGTAAAAAAA TGACT GGAAA AGTCA CAAATTTTGCTGATT TERM 1018 1091171 - 1091158 - g 80 -5.3 -5.1675 | GGATTTATTAAAAAA TCTGA TTTA TCAGA TGAAAAAGAAGAACA TERM 1019 1091239 - 1091219 - g 74 -6.9 -4.30177 | opp_overlap 1091224, overlap 1091230 CAGTAGATCAAGAAA TCGAAGCAA AAG TTGCTTCTA TCGAAAAGTCAACCA TERM 1020 1091277 - 1091261 - g 74 -5.3 -4.79174 | AGTCAACCAATAAAA TTTTATT ATC AATAAAA GCCCATAAAATAGCA rpsA 1089670 - 1091388 + | 30S ribosomal protein S1 TERM 1021 1091411 - 1091440 + F 100 -13 -3.68569 | gap 1, overlap 1091405 1091428 AGTCAACCTCCTCGG TGTCATCCCGTGG CTTAT CCACGGGATG-CA TTGTTGCGTGGATCA TERM 1022 1091503 - 1091519 + G 78 -2.3 -5.77677 | opp_overlap 1091503, overlap 1091496 AGAGCCAGTTAAAAA TACTCAT AAA ATTAGTA TTTTTTATTATTTTC A1I_05685 1091474 - 1092268 + | ATP-dependent Clp protease proteolytic subunit A1I_05695 1092974 - 1092822 - | hypothetical protein A1I_05700 1093027 - 1093200 + | lysozyme A1I_05705 1093467 - 1094450 + | hypothetical protein ubiA 1094753 - 1095583 + | prenyltransferase A1I_05725 1097298 - 1097486 + | hypothetical protein TERM 1023 1097689 - 1097723 + G 74 -7.6 -3.90744 | opp_overlap 1097689 AGCTTAAATGAAAAA TTTTTTAATAATTT AGCTAAA AAATTATTAAAAAA TTGTTTAAACCCACA TERM 1024 1097723 - 1097689 - g 89 -7.6 -4.99134 | opp_overlap 1097689 AGCTTAAATGAAAAA TTTTTTAATAATTT AGCTAAA AAATTATTAAAAAA TTGTTTAAACCCACA A1I_05730 1097584 - 1098321 + | restriction endonuclease S subunits TERM 1025 1098527 - 1098512 - f 85 -2.5 -5.87688 | opp_overlap 1098518 1098519 1098521, overlap 1098521 AGAACTGAAAAAAAA GCGAG TTAATC CTCAC AATATATTGTTGGAG TERM 1026 1099514 - 1099492 - f 79 -9.4 -3.42574 | opp_overlap 1099494 1099495 GCAATTTCATCAGAA CATTTAATTA AAT TAATTAAATG TAATGCATCTGTTAT A1I_05745 1101264 - 1101458 + | Type I site-specific restriction-modification system, R (restriction) subunit A1I_05750 1102852 - 1101455 - | putative phage terminase protein TERM 1027 1101754 - 1101779 + g 83 -10.7 -3.21827 | opp_overlap 1101758, overlap 1101747 1101758 TTGCTTTATCTTCTA TCAATATAAAC CTTG GTTTATATTGA TTGGCTAATTTTTCT TERM 1028 1102871 - 1102891 + H 100 -12.6 -3.05963 | opp_overlap 1102868 AACTACAAAATGTCG TCCCGCAG CTTGA CTGCGGGA TCTTAGGATACAACT TERM 1029 1102939 - 1102919 - H 100 -12.6 -3.08798 | opp_overlap 1102912 ACTGGTGATGCAAGA TCCCGTGG TCAAG CCACGGGA TGACACATTGTTACA A1I_05755 1103026 - 1103502 + | hypothetical protein TERM 1030 1103659 - 1103698 + GT 70 -8.7 -2.52061 | opp_overlap 1103658, overlap 1103665 TGCGAGGAGCAAAGC GACGTGGCAATCTCA TTAAACATCC TGAGATTGCTTCGTC AATTATTTTGTAATT A1I_05765 1104254 - 1104105 - | NADH dehydrogenase subunit A A1I_05760 1103509 - 1104735 + | putative lipid A core - O-antigen ligase A1I_05770 1104882 - 1105256 + | NADH dehydrogenase subunit A TERM 1031 1105337 - 1105372 + F 82 -8 -4.42653 | gap 1, opp_overlap 1105346, overlap 1105346 CTTGACCACGGGGTC CAGTAAAA-ATACTAAT AAT ATTAGTATTTTTTATTG TTTTCTGGATCCCGT TERM 1032 1105362 - 1105346 - f 80 -6.7 -4.72272 | opp_overlap 1105337 1105346 GGGGTCCAGTAAAAA TACTAAT AAT ATTAGTA TTTTTTATTGTTTTC TERM 1033 1105346 - 1105362 + F 95 -6.7 -5.77677 | opp_overlap 1105346, overlap 1105337 GGGGTCCAGTAAAAA TACTAAT AAT ATTAGTA TTTTTTATTGTTTTC A1I_05775 1105436 - 1105960 + | NADH dehydrogenase subunit B A1I_05780 1105938 - 1106528 + | NADH dehydrogenase subunit C A1I_05785 1106525 - 1106941 + | hypothetical protein A1I_05790 1107121 - 1108296 + | NADH dehydrogenase subunit D A1I_05795 1108379 - 1108651 + | excinuclease ABC subunit C A1I_05800 1108819 - 1109322 + | NADH dehydrogenase subunit E A1I_05805 1109315 - 1109536 + | hypothetical protein A1I_05810 1109539 - 1110201 + | 3-methyladenine DNA glycosylase A1I_05815 1111516 - 1110545 - | hypothetical protein A1I_05820 1114262 - 1111596 - | DNA mismatch repair protein TERM 1034 1113076 - 1113052 - G 70 -7.3 -3.68761 | overlap 1113053 1113055 AGCTCAAAACCATAA TTATCAAAGAA TAT TTCTTTGATAG AGTTAGCCGTCTCTA TERM 1035 1113075 - 1113053 - G 83 -10.8 -2.80533 | overlap 1113052 1113055 GCTCAAAACCATAAT TATCAAAGAA TAT TTCTTTGATA GAGTTAGCCGTCTCT TERM 1036 1113073 - 1113055 - G 73 -9 -2.94331 | overlap 1113053 1113052 TCAAAACCATAATTA TCAAAGAA TAT TTCTTTGA TAGAGTTAGCCGTCT A1I_05825 1115941 - 1114340 - | ABC transporter ATP-binding protein A1I_05830 1116182 - 1115952 - | ABC transporter ATP-binding protein TERM 1037 1116127 - 1116143 + g 70 -4.4 -4.84359 | CTAGCTGCAATTTTA GCTAGG CTTAA TCTAGC TTTTTCTCCACCTGA TERM 1038 1116255 - 1116273 + H 88 -9 -4.43037 | ATTTCTAGTTGACTA TTACCATA AAA TATGGTAA TTTAATTTTTGTTAA A1I_05835 1116328 - 1116567 + | hypothetical protein A1I_05840 1116665 - 1117765 + | Outer memberane protein Sca14 A1I_05845 1119097 - 1117919 - | AAA+ superfamily protein TERM 1039 1119105 - 1119134 + H 100 -13.9 -2.84171 | opp_overlap 1119118 1119120 1119122, overlap 1119100 1119102 1119112 1119113 1119122 TTATACATTTTTCCT TACTATTTAGGAA TACA TTCCTAAATAGTA TCACTTTTTAGGAAT TERM 1040 1119148 - 1119122 - H 78 -9.6 -3.13867 | opp_overlap 1119105 1119102 1119113 1119112 1119122, overlap 1119120 1119118 CTATTTAGGAATACA TTCCTAAATAGT ATC ACTTTTTAGGAA TTAAGTCCATATTTT TERM 1041 1119122 - 1119148 + H 78 -9.6 -3.11103 | opp_overlap 1119122 1119120 1119118, overlap 1119105 1119102 1119113 1119112 CTATTTAGGAATACA TTCCTAAATAGT ATC ACTTTTTAGGAA TTAAGTCCATATTTT A1I_05850 1119396 - 1120265 + | hypothetical protein A1I_05855 1122005 - 1120320 - | ABC-type multidrug transport system, ATPase and permease components TERM 1042 1121592 - 1121582 - G 74 -4 -5.25772 | opp_overlap 1121582 AAAGGACAATAAAAA CAAA TAT TTTG ATATTGATATAGGCG A1I_05860 1123017 - 1122151 - | putative transcriptional regulator TERM 1043 1122687 - 1122702 + g 74 -4 -5.20781 | TGAAATCATACATAA GATTCA TAAT TGGATC TTTTCTTTTATCGTA A1I_05865 1123252 - 1123428 + | hypothetical protein A1I_05870 1123796 - 1123464 - | streptomycin 6-kinase TERM 1044 1124000 - 1124033 + G 83 -10.5 -3.28745 | opp_overlap 1124019, overlap 1123995 CCAAAGGACCTATTA GTACTATTTGGAAAA AAAT TATTCCGAATAGTAC TTGCATTCTTGAACA A1I_05875 1123903 - 1124124 + | hypothetical protein A1I_05880 1124234 - 1124533 + | transposase A1I_05885 1124607 - 1124530 - | hypothetical protein A1I_05890 1125764 - 1125147 - | hypothetical protein TERM 1045 1127625 - 1127650 + r 90 -11.9 -2.94561 | overlap 1127622 1127634 CCCTAGCTTGTGCCA CCCACAAATGG TTGC CCATATGTGGG TCATCTTTCTTCCGA TERM 1046 1127958 - 1127976 + r 75 -7.4 -4.09519 | overlap 1127959 1127963 AACCCTTGGACTTTC GGCGAGAA TGT TTCTCGCA TTCTTTATCGCTACT TERM 1047 1127959 - 1127975 + r 83 -10.9 -3.04988 | overlap 1127958 1127963 ACCCTTGGACTTTCG GCGAGAA TGT TTCTCGC ATTCTTTATCGCTAC A1I_05895 1129682 - 1129506 - | hypothetical protein TERM 1048 1129939 - 1129929 - R 70 -5.4 -4.56978 | overlap 1129925 TTTTTAAACAAGAAA CTGA GTT TCAG TAAGTAATTTAGTTT A1I_05900 1130093 - 1129917 - | hypothetical protein A1I_05905 1130519 - 1131454 + | hypothetical protein TERM 1049 1131464 - 1131499 + T 100 -15.2 -4.6971 | opp_overlap 1131467 1131472 TCATAATTTTACCCA TAAGATAATAGTAATT TTTA AATTACTATTATCTTA TTTTATTACCATTTA TERM 1050 1131496 - 1131467 - T 100 -12.5 -3.36803 | opp_overlap 1131464, overlap 1131472 TAATTTTACCCATAA GATAATAGTAATT TTTA AATTACTATTATC TTATTTTATTACCAT A1I_05910 1131960 - 1131505 - | hypothetical protein A1I_05915 1132253 - 1131969 - | hypothetical protein A1I_05920 1132842 - 1132363 - | hypothetical protein TERM 1051 1132775 - 1132789 + g 70 -4.3 -4.84529 | TTTTCAGCCTCTTTA CGATA ATCAA TATCG TTTTTCCATTTATAA A1I_05925 1132889 - 1133959 + | excinuclease ABC subunit C A1I_05930 1134391 - 1133942 - | ABC transporter substrate binding protein A1I_05935 1134715 - 1134416 - | hypothetical protein A1I_05950 1135685 - 1135176 - | hypothetical protein A1I_05955 1136423 - 1137235 + | hypothetical protein TERM 1052 1137727 - 1137707 - g 78 -7 -4.371 | CGCAGGAGAGTAAAA TAGCAAAA ACAGA TTTTGCTA TAAATAGCGGCGTTG coaE 1137229 - 1137804 + | dephospho-CoA kinase A1I_05965 1137792 - 1138481 + | DNA polymerase III subunit epsilon TERM 1053 1138626 - 1138650 + F 71 -8.7 -2.77332 | overlap 1138625 1138624 1138628 CTATATATATTGGTA CAGTTATTAGC TTA GTTGATAACTG GTATTTAATTTAAAT TERM 1054 1138783 - 1138743 - f 100 -14.3 -3.25823 | opp_overlap 1138754, overlap 1138747 GGTTGTTTAGATTAA GAAATTGTAAAGGGATATC AGT GATATCCCTTTATAACCTC TGTAAATAAAATAAT TERM 1055 1138779 - 1138747 - f 100 -13.7 -4.29106 | opp_overlap 1138754, overlap 1138743 GTTTAGATTAAGAAA TTGTAAAGGGATATC AGT GATATCCCTTTATAA CCTCTGTAAATAAAA TERM 1056 1138754 - 1138772 + F 100 -11.8 -3.91858 | opp_overlap 1138747 1138743 TTAAGAAATTGTAAA GGGATATC AGT GATATCCC TTTATAACCTCTGTA A1I_05970 1138802 - 1139224 + | hypothetical protein A1I_05975 1139383 - 1139285 - | hypothetical protein TERM 1057 1140241 - 1140264 + GH 77 -8.4 -3.79164 | opp_overlap 1140244 1140247, overlap 1140235 1140244 1140247 ATAAGGTAGGTTATG TAATAACATT TATA AATGTTATTA TTACTTTGTTTATGA A1I_05980 1139382 - 1140407 + | hypothetical protein TERM 1058 1140510 - 1140493 - g 70 -4.1 -5.07652 | overlap 1140496 TCGCTTAAAAGAAAA GAAGCTA TTTT TAGCATC GATGCAAGAAAATCT A1I_05985 1140410 - 1141135 + | Surfeit locus protein 1 A1I_05990 1141232 - 1143661 + | ATP-dependent helicase A1I_05995 1143722 - 1144093 + | ankyrin repeat-containing protein TERM 1059 1144459 - 1144431 - f 81 -8.4 -4.34789 | opp_overlap 1144438, overlap 1144438 CAATCCAGAAAATAA CAAAAAATGCTA TAAGT TAGCATTTTTTA AACTAGATTGCCTCT TERM 1060 1144452 - 1144438 - f 88 -4.3 -5.77677 | opp_overlap 1144438, overlap 1144431 GAAAATAACAAAAAA TGCTA TAAGT TAGCA TTTTTTAAACTAGAT TERM 1061 1144438 - 1144452 + F 72 -4.3 -5.05782 | opp_overlap 1144438 1144431 GAAAATAACAAAAAA TGCTA TAAGT TAGCA TTTTTTAAACTAGAT TERM 1062 1145063 - 1145049 - f 76 -8.6 -3.53012 | opp_overlap 1145048 TTTTTCTCGTCCAAA GCGATT CTA AATCGC ACTATATTTTATCTT A1I_06000 1145204 - 1145419 + | hypothetical protein A1I_06005 1145467 - 1148067 + | cell surface antigen Sca8 TERM 1063 1148177 - 1148161 - T 83 -6.7 -5.09895 | GATCCAGCTAAAAAA TACTAAT ATT ATTAGTA TAAAAAAGTTGTTTT TERM 1064 1148316 - 1148277 - T 100 -10.4 -5.16572 | opp_overlap 1148287 1148293 ACGGAATCTAAAAAA CAACTAAAAATATCAACA ATAT TATTGATATTTTTAACTG GACCTCGTGAATAAA A1I_06010 1149472 - 1148402 - | hypothetical protein A1I_06015 1149633 - 1151141 + | leucyl aminopeptidase TERM 1065 1151202 - 1151173 - g 80 -6.4 -4.89009 | opp_overlap 1151173 1151172 1151175 1151179, overlap 1151175 ATAGGTAATGAAAAA GGTGGAGCAGGT AAAACA ACCTGCTCTATC CATTTAATAGTGGCA TERM 1066 1151175 - 1151200 + G 74 -9.8 -2.68775 | opp_overlap 1151175 1151173, overlap 1151173 1151172 1151179 AGGTAATGAAAAAGG TGGAGCAGGT AAAACA ACCTGCTCTA TCCATTTAATAGTGG A1I_06020 1151131 - 1151919 + | chromosome partitioning protein-like protein aspS 1152146 - 1153954 + | aspartyl-tRNA synthetase TERM 1067 1153979 - 1154004 + T 95 -12.1 -3.3482 | opp_overlap 1153981 1153986, overlap 1153986 GTTATTACCGCCTAA TAGCAAATTAC TTTT GTAATTTGCTA TTGATTAGACAATTA TERM 1068 1154002 - 1153981 - T 79 -10.3 -3.03441 | opp_overlap 1153979 1153986, overlap 1153986 TATTACCGCCTAATA GCAAATTAC TTTT GTAATTTGC TATTGATTAGACAAT A1I_06030 1154520 - 1154062 - | hypothetical protein TERM 1069 1154656 - 1154695 + H 71 -7.2 -3.79747 | gap 1, opp_overlap 1154654 1154652, overlap 1154659 1154661 AGCTCTAGACATACC TATTACCACCC-CGACCAT AAT ATAGTCGAGGGTGGTATCA TTTAATGGTAGATAC TERM 1070 1154659 - 1154692 + H 100 -13.3 -2.98493 | gap 1, opp_overlap 1154654 1154652, overlap 1154656 1154661 TCTAGACATACCTAT TACCACCC-CGACCAT AAT ATAGTCGAGGGTGGTA TCATTTAATGGTAGA TERM 1071 1154661 - 1154690 + H 87 -11.5 -3.04415 | gap 1, opp_overlap 1154654 1154652, overlap 1154659 1154656 TAGACATACCTATTA CCACCC-CGACCAT AAT ATAGTCGAGGGTGG TATCATTTAATGGTA TERM 1072 1154768 - 1154748 - H 76 -9.9 -2.80545 | opp_overlap 1154748, overlap 1154745 1154747 GACACCCCAAAACAG TTTTAACTG CTT CAGTTAAAA TTTATACTTAACTCC TERM 1073 1154748 - 1154768 + H 91 -9.9 -4.06904 | opp_overlap 1154745 1154747 1154748 GACACCCCAAAACAG TTTTAACTG CTT CAGTTAAAA TTTATACTTAACTCC A1I_06035 1154904 - 1155908 + | ankyrin repeat-containing protein TERM 1074 1156076 - 1156106 + T 84 -8.6 -4.33785 | opp_overlap 1156083, overlap 1156083 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1075 1156099 - 1156083 - T 78 -6.7 -4.67755 | opp_overlap 1156076 1156083 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1076 1156083 - 1156099 + T 95 -6.7 -5.77677 | opp_overlap 1156083, overlap 1156076 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC hemC 1157215 - 1156313 - | porphobilinogen deaminase A1I_06045 1157513 - 1157674 + | hypothetical protein TERM 1077 1158368 - 1158344 - g 89 -8.7 -4.64361 | CAAAAAACAGCAAAA CAACAATAAAG CTA CTTCATCGTTG GGTCATAAAAAAGAC A1I_06050 1157910 - 1160225 + | hypothetical protein TERM 1078 1160281 - 1160252 - T 100 -9.5 -5.43866 | opp_overlap 1160255, overlap 1160255 TAAGTTTTAAAAAAA GAAGTTGCAAATT GTTA AATTTGCAACTTA TCTATAATTTAAAAA TERM 1079 1160255 - 1160278 + T 93 -11.2 -3.66787 | opp_overlap 1160252 1160255 GTTTTAAAAAAAGAA GTTGCAAATT GTTA AATTTGCAAC TTATCTATAATTTAA TERM 1080 1160278 - 1160255 - T 100 -11.2 -4.79949 | opp_overlap 1160255, overlap 1160252 GTTTTAAAAAAAGAA GTTGCAAATT GTTA AATTTGCAAC TTATCTATAATTTAA TERM 1081 1160458 - 1160488 + T 84 -8.6 -4.33785 | opp_overlap 1160465, overlap 1160465 ATTCATGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1082 1160465 - 1160481 + T 95 -6.7 -5.77677 | opp_overlap 1160465, overlap 1160458 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1083 1160481 - 1160465 - T 78 -6.7 -4.67353 | opp_overlap 1160465 1160458 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC A1I_06055 1161578 - 1160682 - | microcin C7 resistance protein TERM 1084 1161430 - 1161411 - G 76 -3.6 -5.5112 | opp_overlap 1161411 TGGAGCAACAAAAAA TGGTAG CTCATCCC CTACCA ATATCTTATCATCTA TERM 1085 1161556 - 1161568 + g 79 -3.5 -5.69023 | ATAAAATCTTGTTGT TTATT AAA AATAA TTTTTTTCATGTTTT A1I_06060 1162759 - 1161584 - | hypothetical protein TERM 1086 1162852 - 1162881 + r 85 -5.9 -5.47218 | CTTGGGAACTAGAGC CAGTTAAAAATAC GTTA GTATTTTTTATTG TTTTTTTGGATACCG A1I_06065 1165668 - 1162918 - | Na+/proline symporter and signal transduction histidine kinase TERM 1087 1165390 - 1165376 - G 70 -4.2 -5.1101 | overlap 1165378 CTACTACCTAAAAAA TGCTCG AAA CGAGGA GCAAGGAAATAGGCA A1I_06070 1166003 - 1165839 - | transposase A1I_06075 1166796 - 1165990 - | transposase TERM 1088 1166973 - 1166954 - R 75 -9.4 -3.01924 | opp_overlap 1166946 1166942 1166954 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1089 1166954 - 1166973 + r 76 -9.4 -3.06087 | opp_overlap 1166954, overlap 1166946 1166942 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1090 1167107 - 1167077 - R 84 -8.6 -4.33785 | opp_overlap 1167084, overlap 1167081 1167084 AGATCCAGAAAATAA TAAATAATACTAAT TTT ATTAGTATTTTTTA GCTGGACCTAGTTAG TERM 1091 1167103 - 1167081 - R 72 -5 -4.72617 | opp_overlap 1167084, overlap 1167077 1167084 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTTAGCTGGACCTAG TERM 1092 1167100 - 1167084 - R 76 -6.7 -4.42118 | opp_overlap 1167084, overlap 1167081 1167077 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTTAGCTGGACC TERM 1093 1167084 - 1167100 + r 83 -6.7 -5.08824 | opp_overlap 1167084 1167081 1167077 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTTAGCTGGACC A1I_06080 1168501 - 1167170 - | hypothetical protein TERM 1094 1167280 - 1167291 + g 74 -3 -5.49809 | opp_overlap 1167280 TTTGATCTGTATAAA TTTC AGAT GAAA TTTTTTTAGCATTTA A1I_06085 1168966 - 1168580 - | hypothetical protein TERM 1095 1168794 - 1168805 + g 70 -4.4 -4.81863 | overlap 1168772 GGCAAATAACCAATT GACA ATTT TGTC TTTTCTTCTAAGTTT TERM 1096 1168885 - 1168895 + g 72 -2.6 -5.4833 | opp_overlap 1168885 GATTTTCCGGTAACA TAAA GTC TTTA TTTTTTATTAAATCA A1I_06090 1169330 - 1169013 - | hypothetical protein A1I_06095 1169676 - 1169473 - | hypothetical protein A1I_06100 1171119 - 1169728 - | succinate semialdehyde dehydrogenase A1I_06105 1171342 - 1171190 - | hypothetical protein A1I_06110 1172740 - 1171400 - | hypothetical protein A1I_06115 1172909 - 1173349 + | hypothetical protein A1I_06120 1174067 - 1173372 - | putative glycoprotein endopeptidase dut 1174657 - 1174205 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 1097 1174243 - 1174263 + g 79 -8.3 -3.96542 | CGAAGCCGCCACTAC CTCTTGCAG TCT CTTCAAGAG TTTCGCTTTCTTTCC A1I_06130 1175573 - 1174659 - | Signal peptide peptidase SppA, 36K type A1I_06135 1176333 - 1175662 - | Thiol:disulfide interchange protein tlpA A1I_06140 1177287 - 1176661 - | protocatechuate-3,4-dioxygenase, beta subunit A1I_06145 1178230 - 1177481 - | transposase A1I_06150 1178424 - 1178236 - | transposase TERM 1098 1178582 - 1178601 + H 76 -9.4 -3.06087 | opp_overlap 1178582, overlap 1178574 1178570 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1099 1178601 - 1178582 - H 75 -9.4 -3.01924 | opp_overlap 1178582 1178574 1178570 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1100 1178735 - 1178705 - H 70 -5.7 -4.33785 | opp_overlap 1178712, overlap 1178709 1178712 AGATCCAGAAAATAA TAAATAATACTAA TGATG TTAGTATTTTTTA GCTGGACCCCGTGGA TERM 1101 1178712 - 1178728 + H 75 -4.5 -5.08824 | opp_overlap 1178712 1178709 1178705 GAAAATAATAAATAA TACTAAT GAT GTTAGTA TTTTTTAGCTGGACC A1I_06155 1178938 - 1179924 + | hypothetical protein A1I_06160 1179930 - 1180046 + | hypothetical protein A1I_06165 1180151 - 1180534 + | hypothetical protein A1I_06170 1180543 - 1181400 + | FTR1 family protein TERM 1102 1181889 - 1181867 - g 73 -7.7 -3.66178 | opp_overlap 1181867 TGGGTTAAGTTTAAA GTATTCGGC GTAGT GCCGACTAC TTTTGTATTCATTTT TERM 1103 1181867 - 1181889 + G 90 -8.4 -4.77629 | opp_overlap 1181867 TGGGTTAAGTTTAAA GTATTCGGCG TAG TGCCGACTAC TTTTGTATTCATTTT A1I_06175 1181414 - 1181956 + | intracellular septation protein A A1I_06180 1182006 - 1182617 + | putative periplasmic or secreted lipoprotein A1I_06185 1182607 - 1183287 + | rare lipoprotein A precursor A1I_06190 1183336 - 1184025 + | ribosomal large subunit pseudouridine synthase A1I_06195 1184019 - 1184597 + | N6-adenine-specific methylase A1I_06200 1184907 - 1187066 + | ankyrin repeat-containing protein A1I_06205 1187480 - 1188490 + | hypothetical protein TERM 1104 1189083 - 1189093 + G 71 -6.8 -4.03413 | opp_overlap 1189079 1189083 1189090 GAAAAAGATAACCAA GGAG AGA CTCC TTTATATGGAGCGGT TERM 1105 1189185 - 1189195 + G 71 -6.8 -4.03413 | opp_overlap 1189181 1189185 1189192 GAAAAAGATAACCAA GGAG AGA CTCC TTTATATGGAGCGGT TERM 1106 1189560 - 1189528 - g 70 -6.4 -4.31688 | opp_overlap 1189538 AAGATGAAGCTAAAA CTCCTATAAATGAT GGAGT ATCAATTTTAGGAG CATCAGAAGCAGAAA A1I_06210 1188504 - 1189625 + | ankyrin repeat-containing protein TERM 1107 1189702 - 1189669 - f 93 -11.3 -3.4684 | opp_overlap 1189664 1189673 TATAATACGAATGAA TATAGGATAAGGTTT TTTA AAATCTTATCCTATA CTAGCGTTTATAAAT TERM 1108 1189673 - 1189698 + F 76 -9.9 -2.82234 | opp_overlap 1189669, overlap 1189664 ATACGAATGAATATA GGATAAGGTTT TTTA AAATCTTATCC TATACTAGCGTTTAT A1I_06215 1189777 - 1191123 + | DNA repair protein RadA A1I_06220 1191263 - 1191847 + | hypothetical protein A1I_06225 1191892 - 1192920 + | hypothetical protein TERM 1109 1193065 - 1193035 - T 74 -6.4 -4.4831 | opp_overlap 1193042, overlap 1193032 1193042 ATCCAGGAAAAATAA TTAAAAATACTTAT TTT ATTAGTATTTCTAA CTGGCTCTAGTTCAT TERM 1110 1193135 - 1193156 + T 71 -8.9 -2.76573 | opp_overlap 1193139, overlap 1193134 AAGATACAATTTTAA TTTACCTAT TTGT ATAGGTAAA ATTCTAATTCTTCAT A1I_06230 1194936 - 1193176 - | hypothetical protein TERM 1111 1193465 - 1193453 - G 75 -4.9 -4.93898 | opp_overlap 1193453 1193462 ATAGCACCAGAAAAA TTAAC TGC GTTAA ATATTAAATTACTTA A1I_06235 1196353 - 1194917 - | nitrogen assimilation regulatory protein NtrX TERM 1112 1196533 - 1196503 - R 100 -12.7 -3.27951 | overlap 1196501 TAGGTTATTATAAGA TGTCATCCCGTGA TCAAG TTACGGGATGACA GGAGTTGCGTGATGA TERM 1113 1198054 - 1198032 - R 76 -9.2 -3.19026 | TATTTTAACAGCTAA CTCATGGTCA CGT TGATCATGAG CAGGACAGCCAAAAA TERM 1114 1198252 - 1198262 + r 75 -4 -5.2015 | overlap 1198249 1198253 TCTATTTCAGGAGTT TTAG AAA CTAA TTTTTCTATTATTGG TERM 1115 1199177 - 1199147 - R 84 -8.6 -4.33182 | opp_overlap 1199154, overlap 1199154 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1116 1199170 - 1199154 - R 95 -6.7 -5.77677 | opp_overlap 1199154, overlap 1199147 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1117 1199154 - 1199170 + r 78 -6.7 -4.67353 | opp_overlap 1199154 1199147 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC A1I_06250 1199747 - 1199226 - | hypothetical protein A1I_06255 1199942 - 1201432 + | Phage prohead protease and phage major capsid protein A1I_06260 1201458 - 1201988 + | hypothetical protein A1I_06265 1202000 - 1202335 + | hypothetical protein A1I_06270 1202325 - 1202735 + | hypothetical protein TERM 1118 1202723 - 1202743 + F 85 -11.2 -2.79915 | opp_overlap 1202711, overlap 1202719 AAGTCCTTTATGTCA TGCCGTGA CTTGA TCACGGCA TCTAATAAAATAAAT TERM 1119 1202783 - 1202758 - f 100 -9.3 -4.88795 | opp_overlap 1202764, overlap 1202764 ATCTAATAAAATAAA TAAAAATACTA ATAT TAGTATTTTTA GCTGGACCCCGTGGA TERM 1120 1202777 - 1202764 - f 81 -3.9 -5.59962 | opp_overlap 1202764, overlap 1202758 TAAAATAAATAAAAA TACTA ATAT TAGTA TTTTTAGCTGGACCC A1I_06275 1202847 - 1203245 + | nucleotidyltransferase substrate binding protein A1I_06280 1203495 - 1204088 + | hypothetical protein A1I_06285 1204085 - 1204870 + | hypothetical protein A1I_06290 1204873 - 1205043 + | hypothetical protein TERM 1121 1205133 - 1205119 - g 77 -4.4 -5.14985 | opp_overlap 1205119, overlap 1205111 TGAAATAGATAAAAA TTTTTA TCG TAAAAA ATTTGAGCATATATT A1I_06295 1205030 - 1205377 + | hypothetical protein infC 1205555 - 1205998 + | translation initiation factor IF-3 TERM 1122 1206086 - 1206066 - f 80 -9.8 -3.32202 | overlap 1206064 GATTGTGATACAAGA TACCGCAA TCAAG TTGCGGTA TGACAAATACTACGC A1I_06305 1206143 - 1207399 + | branched-chain alpha-keto acid dehydrogenase subunit E2 A1I_06310 1207410 - 1207532 + | hypothetical protein prfA 1207575 - 1208648 + | peptide chain release factor 1 TERM 1123 1209248 - 1209229 - g 86 -2.2 -6.47325 | overlap 1209242 1209243 AAAAAATAAAAAAAA TAGAAAAT GATA ATTGTCTA AATATAAATTATTTA TERM 1124 1209267 - 1209243 - g 71 -8.8 -2.83323 | overlap 1209229 1209242 ATAGAAAATGATAAT TGTCTAAATA TAAAT TATTTAGACA TGGAAGAGGAAAGCT A1I_06320 1208658 - 1209332 + | hypothetical protein A1I_06325 1209363 - 1209704 + | hypothetical protein TERM 1125 1210344 - 1210360 + G 74 -2.2 -5.63517 | GAATGTAAACATCTT GCAGCT GTAGG GGTTGC TTTTTTATTTGCAAC TERM 1126 1210596 - 1210615 + G 75 -5 -5.10933 | GGGCTTAATGAAATC CCAAAATG CTAT CATTTAGG TTTTATTTTAGGTCC A1I_06330 1209741 - 1211498 + | single-stranded-DNA-specific exonuclease RecJ TERM 1127 1211543 - 1211529 - g 76 -3.6 -5.47399 | GCAATTTTAAAAAAA TAAAAG ATG CTTCTA CAAAAATTTCAAAAG TERM 1128 1212003 - 1211986 - g 72 -3.5 -5.15634 | overlap 1211988 TATGGGATTAAAAAA TCTAAAG GATT CTTTAAA GCCAAAAGGTGGTAT A1I_06335 1211504 - 1212802 + | putative methyltransferase TERM 1129 1213246 - 1213199 - g 100 -8.6 -5.65177 | overlap 1213201 1213202 ACATTTAGAAAAAAA TACTCCGCTTGGTAAGTTACAA AAGT TTGTAACTGATCAAGCAGAAAA AGCACAAGAAAAATT TERM 1130 1213244 - 1213201 - g 100 -11.2 -4.46105 | overlap 1213199 1213202 ATTTAGAAAAAAATA CTCCGCTTGGTAAGTTACAA AAGT TTGTAACTGATCAAGCAGAA AAAGCACAAGAAAAA TERM 1131 1213243 - 1213202 - g 90 -12.5 -3.26036 | overlap 1213201 1213199 TTTAGAAAAAAATAC TCCGCTTGGTAAGTTACAA AAGT TTGTAACTGATCAAGCAGA AAAAGCACAAGAAAA A1I_06340 1212903 - 1213463 + | hypothetical protein TERM 1132 1213560 - 1213588 + T 72 -6.3 -4.33182 | TTGATGGGATCCAGT TAAAAATATCAAT AAT ATTTATATTTTTA TTATTTTCTGGATGC recO 1214387 - 1213662 - | DNA repair protein RecO A1I_06350 1214704 - 1214384 - | hypothetical protein A1I_06355 1215506 - 1214751 - | hypothetical protein A1I_06360 1217085 - 1215634 - | isocitrate dehydrogenase A1I_06365 1217651 - 1217097 - | Outer membrane protein TERM 1133 1217763 - 1217711 - R 100 -12.9 -2.56273 | opp_overlap 1217691, overlap 1217702 AGGAGATGCAACGCA TCGACGCAGCAATCTCATAAAGC AATATAA ACCTCCTGAGATTGCCACGTCGA AATTTACAGTTTCTC A1I_06370 1218501 - 1217860 - | hypothetical protein A1I_06375 1218720 - 1220555 + | GTP-binding protein A1I_06380 1221408 - 1220647 - | transposase A1I_06385 1221602 - 1221378 - | transposase TERM 1134 1221779 - 1221760 - R 75 -9.4 -3.01924 | opp_overlap 1221760 1221752 1221748 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1135 1221760 - 1221779 + r 76 -9.4 -3.06087 | opp_overlap 1221760, overlap 1221752 1221748 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1136 1221909 - 1221887 - R 72 -5 -4.72617 | opp_overlap 1221890, overlap 1221890 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 1137 1221906 - 1221890 - R 76 -6.7 -4.42118 | opp_overlap 1221890, overlap 1221887 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 1138 1221890 - 1221906 + r 78 -6.7 -4.67755 | opp_overlap 1221890 1221887 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT A1I_06390 1223977 - 1222208 - | ABC-type multidrug transport system, ATPase component A1I_06395 1224610 - 1223984 - | hypothetical protein A1I_06400 1225465 - 1225031 - | ribose-5-phosphate isomerase B A1I_06405 1226060 - 1225734 - | hypothetical protein TERM 1139 1225919 - 1225898 - G 80 -9.5 -3.52207 | gap 1, overlap 1225914 CTAAATTAGAAGTAA GC-GGCTCTT TAG AAGAGCCTGC AATAGAAACTACTGA A1I_06410 1226336 - 1227025 + | putative metal-dependent hydrolase thyX 1227284 - 1228168 + | FAD-dependent thymidylate synthase TERM 1140 1229324 - 1229312 - g 75 -4.9 -5.04249 | opp_overlap 1229312 CTGGTAAAAAAGAAA GTAAA ATC TTTAC AGGCTTTACTTTATT A1I_06420 1228270 - 1229376 + | hypothetical protein TERM 1141 1230372 - 1230362 - T 83 -6.8 -5.14965 | ACGTGGATCAAAAAA CACC CTC GGTG TCATCAACTATGTTT A1I_06435 1231137 - 1230376 - | transposase A1I_06440 1231331 - 1231143 - | transposase TERM 1142 1231489 - 1231508 + r 76 -9.4 -3.06087 | opp_overlap 1231489, overlap 1231481 1231477 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1143 1231508 - 1231489 - R 75 -9.4 -3.01924 | opp_overlap 1231489 1231481 1231477 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT A1I_06445 1232452 - 1231892 - | Outer memberane protein Sca16 TERM 1144 1232529 - 1232542 + r 79 -5.3 -5.27477 | AAATTTGCAGCGATT TCAGA GGTA TCTGA TTTTTTAATTCCAAT A1I_06450 1233588 - 1232590 - | phospholipase/lecithinase/hemolysin tolB 1235023 - 1233689 - | translocation protein TolB A1I_06460 1236171 - 1235200 - | periplasmic protein TonB A1I_06465 1236592 - 1236161 - | hypothetical protein A1I_06470 1237317 - 1236592 - | hypothetical protein TERM 1145 1237317 - 1237362 + H 91 -8.9 -4.74012 | gap 1, opp_overlap 1237322 1237324 1237326 1237346, overlap 1237318 TAGTATCTGCACTCA T-TGAATATATTATTTAATTAT CTT AAAATTAAATAATATATTCATA TTTTGATTTTGTCAT TERM 1146 1237318 - 1237360 + H 100 -14 -3.96876 | opp_overlap 1237322 1237324 1237326 1237346, overlap 1237317 AGTATCTGCACTCAT TGAATATATTATTTAATTAT CTT AAAATTAAATAATATATTCA TATTTTGATTTTGTC TERM 1147 1237356 - 1237322 - H 73 -9 -3.07816 | opp_overlap 1237318 1237317, overlap 1237324 1237326 1237346 TCTGCACTCATTGAA TATATTATTTAATTAT CTT AAAATTAAATAATATA TTCATATTTTGATTT TERM 1148 1237424 - 1237466 + H 87 -11 -3.36452 | opp_overlap 1237425, overlap 1237425 1237427 GATTAAGATATAAAA ATATTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAATAA TTAATATTAGCAAAT TERM 1149 1237465 - 1237425 - H 100 -14.5 -5.10968 | opp_overlap 1237424 1237425 1237427 ATTAAGATATAAAAA TATTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAATA ATTAATATTAGCAAA TERM 1150 1237425 - 1237465 + H 100 -14.5 -2.6155 | opp_overlap 1237425, overlap 1237424 1237427 ATTAAGATATAAAAA TATTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAATA ATTAATATTAGCAAA TERM 1151 1237427 - 1237463 + H 100 -12.7 -2.84723 | opp_overlap 1237425, overlap 1237425 1237424 TAAGATATAAAAATA TTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAA TAATTAATATTAGCA A1I_06475 1237489 - 1238643 + | AAA+ superfamily protein TERM 1152 1238675 - 1238715 + T 81 -10.1 -3.39569 | opp_overlap 1238677, overlap 1238666 1238677 ATTATCTAGAACAAT AATTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAATA TTAATGTATATTATT TERM 1153 1238713 - 1238677 - T 100 -12.7 -4.03888 | opp_overlap 1238677 1238675 1238666 TATCTAGAACAATAA TTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAA TATTAATGTATATTA TERM 1154 1238677 - 1238713 + T 100 -12.7 -3.25307 | opp_overlap 1238677, overlap 1238675 1238666 TATCTAGAACAATAA TTGTACAAATTAGAAAT TGG ATTTATAATTTGTACAA TATTAATGTATATTA A1I_06480 1239381 - 1238716 - | hypothetical protein A1I_06485 1239524 - 1239399 - | hypothetical protein A1I_06490 1240890 - 1239871 - | cytochrome d ubiquinol oxidase subunit II TERM 1155 1240100 - 1240110 + g 74 -3.2 -5.4251 | ATAGTATATATAAAT GGAG CTA CTTC TTTTTTATCTCTCAC TERM 1156 1241046 - 1241060 + H 82 -4.4 -5.55855 | overlap 1241055 AGTTGAATTATGTGT TATTTA TAG TAAATA TTTTATTTTTTTAAG TERM 1157 1241055 - 1241065 + H 72 -2.6 -5.42862 | overlap 1241046 ATGTGTTATTTATAG TAAA TAT TTTA TTTTTTTAAGGATAT A1I_06495 1241205 - 1242143 + | ankyrin repeat-containing protein A1I_06500 1243113 - 1242136 - | pyruvate dehydrogenase subunit beta A1I_06505 1244265 - 1243285 - | pyruvate dehydrogenase e1 component, alpha subunit precursor TERM 1158 1244347 - 1244383 + r 100 -9.8 -5.09225 | opp_overlap 1244357, overlap 1244357 CTTGATCACGGGGTC CAGTTAAAAATATCAA CATTA TTGATATTTTTAGTTG TTTTTTGGATCCCGT TERM 1159 1244357 - 1244373 + r 70 -3.8 -5.10004 | opp_overlap 1244357, overlap 1244347 GGGTCCAGTTAAAAA TATCAA CATTA TTGATA TTTTTAGTTGTTTTT A1I_06510 1245198 - 1244377 - | exodeoxyribonuclease III A1I_06515 1246389 - 1245199 - | penicillin-binding protein 4* TERM 1160 1245301 - 1245311 + g 71 -5.4 -4.63928 | AATTTTATCTTGCAT TTCC TCA GGAA TTTTTACCATAGTAT TERM 1161 1245791 - 1245781 - G 70 -4 -5.03145 | TAATGGTCTAAAAAA TTCA TCT TGAA AAAAATTACATAAAT A1I_06520 1247351 - 1246419 - | ribosomal large subunit pseudouridine synthase A1I_06525 1248280 - 1247324 - | cytochrome c oxidase assembly protein TERM 1162 1248038 - 1248021 - GR 81 -4.3 -5.45802 | opp_overlap 1248006 1248021 1248023 CCTTTAAAATAAAAA TATATTA AAGG TAATATA TATATCAAACCTGTA A1I_06530 1248905 - 1248348 - | putative esterase A1I_06535 1249791 - 1249030 - | transposase A1I_06540 1249985 - 1249797 - | transposase TERM 1163 1250146 - 1250165 + r 76 -9.4 -3.06087 | opp_overlap 1250146, overlap 1250138 1250134 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1164 1250165 - 1250146 - R 75 -9.4 -3.01924 | opp_overlap 1250138 1250134 1250146 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT A1I_06545 1251250 - 1250375 - | nucleotidyltransferase A1I_06550 1251538 - 1251416 - | hypothetical protein A1I_06555 1253740 - 1251659 - | ribonuclease E TERM 1165 1253951 - 1253923 - H 78 -9.1 -3.37568 | opp_overlap 1253922 1253925, overlap 1253920 1253921 CATATATAAAAACTA CATTAGATATTTA TTT TATATATCTAATG CTATATAAGCTCATC TERM 1166 1255033 - 1255057 + G 77 -4.3 -5.28942 | ATATTATATGTTATA TTGATCGGAAG TTG CTTAGGATCAA TTTTTATTTGCAATA A1I_06560 1254148 - 1255305 + | hypothetical protein TERM 1167 1255326 - 1255310 - g 71 -3 -5.1417 | CTACAAAATGAAAAA CTCCTT AAATA AAAGAG ACATCTCAATATTAA TERM 1168 1255738 - 1255728 - g 81 -3.2 -5.73672 | AAAGAAGGAAAAAAA GCCT TTA AAGC TTCTTACCTTTATAA A1I_06565 1255302 - 1256576 + | proline/betaine transporter A1I_06570 1256937 - 1256563 - | hypothetical protein TERM 1169 1258077 - 1258106 + G 100 -12.5 -4.23892 | opp_overlap 1258077 AAGATAAAGAAAAAA TATTAACTATCTT AAAT AAGATAGTTAATA TTTTAGGTACTTCAC TERM 1170 1258106 - 1258077 - g 100 -12.5 -5.7827 | opp_overlap 1258077 AAGATAAAGAAAAAA TATTAACTATCTT AAAT AAGATAGTTAATA TTTTAGGTACTTCAC A1I_06575 1257188 - 1259668 + | ankyrin repeat-containing protein A1I_06580 1259901 - 1259689 - | hypothetical protein A1I_06585 1260386 - 1259961 - | hypothetical protein TERM 1171 1260477 - 1260491 + H 70 -4.4 -4.87592 | opp_overlap 1260489, overlap 1260489 AGGTAACTTAAATTT TTAATT GAT AATTAA TTTTATTATGTGTAG TERM 1172 1260684 - 1260704 + G 71 -5.5 -4.58466 | opp_overlap 1260686 AATAGTAAGGGTAGA GATTTGAGT TAT ACTAAAATC TTTTATAATTATGGC A1I_06590 1260543 - 1261382 + | hypothetical protein A1I_06595 1261369 - 1261485 + | hypothetical protein TERM 1173 1262007 - 1262041 + T 84 -6.7 -5.31456 | opp_overlap 1262009 1262017, overlap 1262010 1262017 ATTGACGAAGCAATC CAGTAAAAAATGCTA ACTTA TAGCATTTTTTATTA TTTTTTCTGGATTGC TERM 1174 1262010 - 1262038 + T 100 -10.6 -4.73105 | opp_overlap 1262009 1262017, overlap 1262007 1262017 GACGAAGCAATCCAG TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 1175 1262031 - 1262017 - T 75 -4.3 -5.18357 | opp_overlap 1262010 1262007 1262017, overlap 1262009 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 1176 1262017 - 1262031 + T 88 -4.3 -5.80727 | opp_overlap 1262017 1262009, overlap 1262010 1262007 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT rpsI 1262684 - 1262190 - | 30S ribosomal protein S9 rplM 1263158 - 1262691 - | 50S ribosomal protein L13 A1I_06610 1264495 - 1263251 - | WD-40 repeat-containing protein TERM 1177 1264537 - 1264555 + r 78 -10.4 -2.84218 | overlap 1264536 CTCTATCTAAGCCTG CAAGCAAA GCT TTTGCTTG ATCTTTTAGTAAATC A1I_06615 1265182 - 1264514 - | hypothetical protein A1I_06620 1265940 - 1265188 - | hypothetical protein A1I_06625 1267544 - 1266048 - | histidine kinase sensor protein TERM 1178 1267706 - 1267670 - R 100 -14.9 -4.87665 | opp_overlap 1267680, overlap 1267680 CGGGATCCAGAAAAA CAATTAAAAATATCAAT ATC ATTGATATTTTTAACTG GACCCCGTGGTCAAG TERM 1179 1267696 - 1267680 - R 83 -6.7 -5.10004 | opp_overlap 1267680, overlap 1267670 AAAAACAATTAAAAA TATCAAT ATC ATTGATA TTTTTAACTGGACCC TERM 1180 1267680 - 1267696 + r 78 -6.7 -4.65895 | opp_overlap 1267680 1267670 AAAAACAATTAAAAA TATCAAT ATC ATTGATA TTTTTAACTGGACCC A1I_06630 1269116 - 1267755 - | carboxyl-terminal protease A1I_06635 1271237 - 1269249 - | DNA topoisomerase IV subunit B A1I_06640 1273359 - 1271356 - | ankyrin repeat-containing protein A1I_06645 1274237 - 1273476 - | transposase A1I_06650 1274431 - 1274243 - | transposase TERM 1181 1274592 - 1274611 + r 76 -9.4 -3.06087 | opp_overlap 1274592, overlap 1274584 1274580 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1182 1274611 - 1274592 - R 75 -9.4 -3.01924 | opp_overlap 1274592 1274584 1274580 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT A1I_06655 1275207 - 1274824 - | hypothetical protein TERM 1183 1274959 - 1274983 + g 72 -3.7 -5.22289 | TTCTTCAAGAGCATT TTTAGATGAAA CAT TATTATCTAAA TTTTTATCTTTAATA A1I_06660 1276572 - 1275208 - | Type I secretion outer membrane protein TolC A1I_06665 1276785 - 1277984 + | hypothetical protein A1I_06670 1277977 - 1278375 + | hypothetical protein tdk 1278535 - 1279155 + | thymidylate kinase TERM 1184 1280267 - 1280249 - g 79 -7.4 -4.52873 | overlap 1280252 TGTTTATAAAAATAA TGATGGCA AAG TGCCAGCA ATCACGCAAGATGCA A1I_06680 1279152 - 1280681 + | methionyl-tRNA synthetase A1I_06685 1281036 - 1281899 + | putative deoxyribonuclease TatD A1I_06690 1281979 - 1282875 + | hypothetical protein A1I_06695 1282856 - 1282981 + | hypothetical protein TERM 1185 1283110 - 1283077 - f 79 -5 -5.31456 | gap 1, opp_overlap 1283077 1283080 1283087, overlap 1283080 1283087 GCAATCTAGAAAAAA TAATAAAAAATACTA TAATT TAGTATTTTTTA-TA CTTCCTTGCTTCGTC TERM 1186 1283108 - 1283080 - f 100 -9.2 -4.73105 | opp_overlap 1283077 1283080 1283087, overlap 1283077 1283087 ATCTAGAAAAAATAA TAAAAAATACTA TAATT TAGTATTTTTTA TACTTCCTTGCTTCG TERM 1187 1283080 - 1283108 + F 74 -9.2 -2.87354 | opp_overlap 1283080 1283077 1283087, overlap 1283077 1283087 ATCTAGAAAAAATAA TAAAAAATACTA TAATT TAGTATTTTTTA TACTTCCTTGCTTCG TERM 1188 1283101 - 1283087 - f 81 -2.9 -5.80727 | opp_overlap 1283080 1283077 1283087, overlap 1283080 1283077 AAAAATAATAAAAAA TACTA TAATT TAGTA TTTTTTATACTTCCT TERM 1189 1283087 - 1283101 + F 72 -2.9 -5.38249 | opp_overlap 1283087 1283080 1283077, overlap 1283080 1283077 AAAAATAATAAAAAA TACTA TAATT TAGTA TTTTTTATACTTCCT TERM 1190 1283515 - 1283538 + F 83 -10.4 -3.2827 | opp_overlap 1283518 CTTCTAACTCCCCAA CCACCATAAA ATAT TTTGTGGTGG TTAATACTTGAATAA A1I_06700 1283581 - 1283997 + | hypothetical protein A1I_06705 1284514 - 1284293 - | hypothetical protein A1I_06710 1285339 - 1284821 - | hypothetical protein A1I_06715 1286378 - 1285341 - | mannose-1-phosphate guanylyltransferase A1I_06720 1287274 - 1286453 - | formamidopyrimidine-DNA glycosidase ubiE 1287336 - 1287503 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1191 1288077 - 1288097 + G 71 -6.9 -4.08216 | opp_overlap 1288076 1288072 CTGATATTAATAAAG CTCTAAAAG AAG CTTATAGAG TTTTAAAACCGATGG A1I_06730 1287632 - 1288378 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1192 1288778 - 1288746 - g 91 -10.6 -4.08216 | opp_overlap 1288773, overlap 1288723 1288766 1288769 TCATCCCCGTGAAAA CGGGGATCCAGAAA AAAAA TTACTGGATTCCCG CCTATGCGGGAATGA TERM 1193 1288773 - 1288790 + G 86 -11.3 -2.62184 | opp_overlap 1288746 1288769 1288766 AAAAAAATTACTGGA TTCCCGC CTAT GCGGGAA TGATATAGAGGAAAG TERM 1194 1289005 - 1288982 - g 71 -5.4 -4.56775 | ATTTCCTTGCAAAAA TTGCTTCAAA ATTT TCTAAAGCAA AAAGGCTGAAACCGA A1I_06735 1288375 - 1289841 + | 2-polyprenylphenol 6-hydroxylase A1I_06740 1289907 - 1291043 + | ATPase A1I_06745 1291175 - 1292962 + | hypothetical protein A1I_06750 1293295 - 1293080 - | putative transcriptional regulator TERM 1195 1293435 - 1293457 + r 72 -5 -4.72617 | opp_overlap 1293438 1293444, overlap 1293438 ACTAGAGCCAGTTAA AAATACTAAT AAT ATTAGTATTA TTTATTATTTTCTGG TERM 1196 1293454 - 1293438 - R 78 -6.7 -4.67755 | opp_overlap 1293435 1293438, overlap 1293444 AGAGCCAGTTAAAAA TACTAAT AAT ATTAGTA TTATTTATTATTTTC TERM 1197 1293438 - 1293454 + r 76 -6.7 -4.42118 | opp_overlap 1293438 1293444, overlap 1293435 AGAGCCAGTTAAAAA TACTAAT AAT ATTAGTA TTATTTATTATTTTC TERM 1198 1293896 - 1293938 + r 71 -6.7 -3.96148 | gap 2, opp_overlap 1293896 1293894 1293930 GGAGCAAGTAAAATA TTAGTA-TACTATTTGGT-GC TAT GCTACAAAATAGTAATACTAA TTTGTAGTGGCACGC engA 1295547 - 1294189 - | GTP-binding protein EngA TERM 1199 1295124 - 1295107 - G 71 -8.5 -2.79302 | overlap 1295109 ACCATGCTCAGCAGA GATAGCA ACCA TGCTATC AAATCCAAGCTTGTA A1I_06760 1296120 - 1295695 - | hypothetical protein TERM 1200 1296101 - 1296073 - G 74 -5.5 -4.87665 | overlap 1296076 TGGTATCCAGAAAAA TAATAAAAAATAC TCC GTATTTTTTACTG GATCTAGTTCCCAAG TERM 1201 1296098 - 1296076 - G 93 -9.4 -4.5448 | overlap 1296073 TATCCAGAAAAATAA TAAAAAATAC TCC GTATTTTTTA CTGGATCTAGTTCCC TERM 1202 1296248 - 1296229 - H 76 -9.4 -3.06087 | opp_overlap 1296229, overlap 1296220 1296218 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 1203 1296229 - 1296248 + H 75 -9.4 -3.01924 | opp_overlap 1296229 1296220 1296218 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA A1I_06765 1296406 - 1296630 + | transposase A1I_06770 1296600 - 1297364 + | transposase A1I_06775 1298263 - 1297379 - | hypothetical protein TERM 1204 1298242 - 1298254 + g 76 -3.5 -5.32699 | opp_overlap 1298242 TAAAAAAAACAGTAA TTATT AGT AATAA TTTTTTCATATTTAA A1I_06780 1300565 - 1298427 - | organic solvent tolerance protein-like protein TERM 1205 1298640 - 1298658 + g 80 -9 -3.67141 | opp_overlap 1298631, overlap 1298631 AACAGACCAATTATC TGTCAATT GGT AATTGACA TTTCCGTAAAATTGT TERM 1206 1299149 - 1299166 + g 72 -3.5 -5.18726 | opp_overlap 1299141 AAGAAACTATCGGCT CAATAAG TACA TTTATTG TTTTTGTTATAGCAC TERM 1207 1301686 - 1301670 - g 90 -8.1 -4.74801 | overlap 1301674 CAATCTTATGAAAAA GTATTAG TAA CTAATAC TAAACAGCTAGTTAA xseA 1300818 - 1302146 + | exodeoxyribonuclease VII large subunit A1I_06790 1302171 - 1302932 + | hypothetical protein A1I_06795 1303061 - 1303756 + | hypothetical protein A1I_06800 1303817 - 1304602 + | exodeoxyribonuclease III ksgA 1304872 - 1305678 + | dimethyladenosine transferase TERM 1208 1305691 - 1305717 + T 81 -9.5 -3.68569 | gap 1 TAATTAAGGTTCATA TGTCATTCCCGC CTAT GCGGGAA-GGCA TTGTTGCGTGGATCG A1I_06810 1306513 - 1305752 - | transposase A1I_06815 1306707 - 1306483 - | transposase TERM 1209 1306865 - 1306884 + H 76 -9.4 -3.06087 | opp_overlap 1306865, overlap 1306857 1306853 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1210 1306884 - 1306865 - H 75 -9.4 -3.01924 | opp_overlap 1306865 1306857 1306853 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1211 1307012 - 1307040 + H 77 -5.5 -4.87665 | overlap 1307015 CTTGGGAACTAGATC CAGTAAAAAATAC GGA GTATTTTTTATTA TTTTTCTGGATACCA TERM 1212 1307015 - 1307037 + H 100 -9.4 -4.5448 | overlap 1307012 GGGAACTAGATCCAG TAAAAAATAC GGA GTATTTTTTA TTATTTTTCTGGATA A1I_06820 1307433 - 1307717 + | hypothetical protein TERM 1213 1307757 - 1307792 + T 90 -7.1 -5.34632 | AAGTTAAATTTTAGG TAGGTTTAGAGTG TTTTTATATT TACTCTAAACCTA TTTTTATATTTTCTT A1I_06825 1307886 - 1307779 - | hypothetical protein TERM 1214 1308060 - 1308032 - H 100 -10.6 -4.73105 | opp_overlap 1308039, overlap 1308039 ATCCAGAAAAAATAA TAAAAAATGCTA TAAGT TAGCATTTTTTA ACTGGATTGCTTCGT TERM 1215 1308039 - 1308053 + H 72 -4.3 -5.10497 | opp_overlap 1308032 1308039 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAACTGGATT TERM 1216 1308053 - 1308039 - H 88 -4.3 -5.80727 | opp_overlap 1308039, overlap 1308032 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAACTGGATT A1I_06830 1308167 - 1309342 + | MFS-type bicyclomycin resistance protein TERM 1217 1309416 - 1309380 - f 78 -9.6 -3.18582 | opp_overlap 1309372, overlap 1309384 GAGCGTAGCGACGAA GCAATCTCATGAAG TAGTATAAG CTTCCTGAGATTGC CGCATCGAATTACTC TERM 1218 1309821 - 1309799 - f 100 -10.8 -4.68593 | opp_overlap 1309805 GGCACTAGGCAAAAA TAATAATAGC GGT GCTATTATTA AAGGTATTGATTTAA A1I_06845 1310714 - 1311379 + | lipoprotein releasing system ATP-binding protein LolD TERM 1219 1312422 - 1312404 - g 76 -5.2 -5.0133 | TACCTTGGTAAAAAA GAGGAAGC TCA ACCCCCTC AACCACAACCTATAA A1I_06850 1311438 - 1313570 + | hypothetical protein TERM 1220 1316099 - 1316119 + F 100 -12.6 -3.06162 | GGAGTTATTGTGTCA TCCCGCGA CTCGA TCGCGGGA TCTTAGGATACAATC TERM 1221 1316169 - 1316145 - f 80 -10 -3.29461 | overlap 1316147 CAATCTGTGGCATAA GATCCCGTGG TCAAG CCACGGGATG ACAATAAACAATAAG TERM 1222 1316167 - 1316147 - f 100 -12.6 -3.21395 | overlap 1316145 ATCTGTGGCATAAGA TCCCGTGG TCAAG CCACGGGA TGACAATAAACAATA A1I_06875 1317055 - 1317474 + | hypothetical protein A1I_06880 1317693 - 1317911 + | hypothetical protein A1I_06885 1317938 - 1318171 + | hypothetical protein TERM 1223 1319919 - 1319902 - g 71 -8.5 -2.88544 | GCCTAGGTTTATATA TGCCTTA GGTA TAAGGCA TATAGGCGAGCAGAA ligA 1318331 - 1320400 + | NAD-dependent DNA ligase LigA TERM 1224 1320626 - 1320599 - g 91 -7.9 -5.20333 | gap 1, opp_overlap 1320599, overlap 1320593 1320603 GAGTTAGAAGAAAAA GCAACTGTTGCA TTTTT TGCAACAGTT-C AAATTGAAGGAGAAA TERM 1225 1320623 - 1320603 - g 86 -9.8 -3.96481 | opp_overlap 1320599, overlap 1320593 1320599 TAGAAGAAAAAGCAA CTGTTGCA TTTTT TGCAACAG TTCAAATTGAAGGAG A1I_06895 1320407 - 1320880 + | putative virulence protein TERM 1226 1320979 - 1320951 - T 100 -12.1 -4.64763 | opp_overlap 1320948 1320957, overlap 1320957 GCATCCAAAAAATAA TAAAAATACTAAT TTT ATTAGTATTTTTA ACTGGATCCCGCAAT TERM 1227 1320957 - 1320973 + T 78 -6.7 -4.67353 | opp_overlap 1320951 1320957, overlap 1320948 AAAAAATAATAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1228 1320973 - 1320957 - T 90 -6.7 -5.54403 | opp_overlap 1320948 1320957, overlap 1320951 AAAAAATAATAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC A1I_06900 1321402 - 1321232 - | hypothetical protein A1I_06905 1322772 - 1321420 - | hypothetical protein TERM 1229 1323116 - 1323091 - R 72 -4.9 -4.85782 | gap 1, opp_overlap 1323091 GGCGTTAAAAAGAAA GAAACAGAACAA TTT TTGCT-TGTTTC TTATGGATAAGGCTT A1I_06910 1323933 - 1323211 - | hypothetical protein TERM 1230 1324102 - 1324092 - H 76 -2.6 -5.50723 | TTACTAAAATAAAAA TATA GTC TATA ACTTTGAACTACCGT TERM 1231 1325159 - 1325133 - g 72 -2.4 -5.34857 | opp_overlap 1325134, overlap 1325134 CTAAACAAAATAAAA TTTTCTTACAGA AAT TCCATAACAAAA ATCCTACTGAACTTG A1I_06925 1324895 - 1325749 + | periplasmic protein TERM 1232 1327115 - 1327103 - T 76 -3.5 -5.36689 | opp_overlap 1327103 AAACGAAAAAGAAAA TAATT TTA AATTA TTGATGATGGATAAT TERM 1233 1328218 - 1328232 + T 88 -4.3 -5.80727 | opp_overlap 1328218 AATCTAGTAAGGAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT A1I_06940 1329175 - 1328300 - | lipid A biosynthesis lauroyl acyltransferase TERM 1234 1328582 - 1328567 - GT 83 -6.8 -4.78752 | opp_overlap 1328567 AGGATAACCTAAAAA CGGCAC TTCA ATGCCG TCATTCATTTTCTGA TERM 1235 1328845 - 1328825 - GT 79 -4.7 -5.19212 | opp_overlap 1328825 1328827 ATGACCAGTAAAAAA CAAAAAAGG CTG CCCTTTTAG CTTTTTAATATTTTC lpxK 1330115 - 1329150 - | tetraacyldisaccharide 4'-kinase TERM 1236 1330208 - 1330172 - R 72 -7.6 -3.66424 | gap 1, opp_overlap 1330179 1330181 1330201, overlap 1330162 1330179 TAAAATTATTTTAAA TA-AAAAAGCCCCCTTT TTTC AAAGAGGACTTTTTCTA AAAAATATATAAGCA TERM 1237 1330200 - 1330179 - R 90 -7.3 -5.64421 | opp_overlap 1330179 1330181, overlap 1330172 ATTTTAAATAAAAAA GCCCCCTTT TTTC AAAGAGGAC TTTTTCTAAAAAATA A1I_06950 1333435 - 1330337 - | Outer membrane protein rOmpB TERM 1238 1333142 - 1333160 + g 77 -9 -3.20367 | ACCAGCAGTAGCAGT TCCTATTT GTA AAATAGGA TTAATGCCATTATTA A1I_06955 1334609 - 1334004 - | guanosine polyphosphate pyrophosphohydrolase/synthetase A1I_06960 1335837 - 1334863 - | Beta-glucosidase TERM 1239 1334975 - 1334985 + g 76 -5.4 -5.04385 | ACTATATCTACTCCT GCTT CTA AAGC TTTTTTAGCAATATC A1I_06965 1336422 - 1336168 - | integration host factor alpha-subunit TERM 1240 1336618 - 1336590 - R 100 -10.6 -4.55383 | opp_overlap 1336597, overlap 1336597 AATCCAGAAAAATAA TAAAAAATGCTA TAAGT TAGCATTTTTTA ACTGGATCCCGCTAC TERM 1241 1336597 - 1336611 + r 72 -4.3 -5.09895 | opp_overlap 1336590 1336597 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAACTGGATC TERM 1242 1336611 - 1336597 - R 88 -4.3 -5.80727 | opp_overlap 1336597, overlap 1336590 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAACTGGATC A1I_06970 1337147 - 1336722 - | hypothetical protein A1I_06975 1337377 - 1337844 + | bacterioferritin comigratory protein A1I_06980 1338343 - 1338083 - | DnaK suppressor-like protein xerC 1339377 - 1338460 - | site-specific tyrosine recombinase XerC TERM 1243 1338916 - 1338889 - G 71 -7.8 -3.41878 | opp_overlap 1338889, overlap 1338869 CTTTGTAATCGATAA TGCTTCAGATAT TCGT AAACCTGAAGCA TATATAAGAACAAGT A1I_06990 1339544 - 1340026 + | phasin family protein A1I_06995 1340722 - 1340117 - | phospholipase D superfamily protein PLD TERM 1244 1340698 - 1340708 + g 72 -2.6 -5.47159 | CAATAAATATTTCCG TAAA TTT TTTA TTTTTTCTCTTCACA A1I_07000 1341513 - 1340731 - | Poly(3-hydroxyalkanoate) synthetase TERM 1245 1341106 - 1341130 + g 77 -4.3 -5.18357 | opp_overlap 1341093, overlap 1341107 AAGATCTATCTTAGT TCCTAATACAT CTA AAGTATTAGGC TTTTTTAATAAATTA TERM 1246 1341107 - 1341129 + g 73 -7.8 -3.6993 | overlap 1341106 AGATCTATCTTAGTT CCTAATACAT CTA AAGTATTAGG CTTTTTTAATAAATT A1I_07005 1342479 - 1341655 - | Poly(3-hydroxyalkanoate) synthetase A1I_07010 1343944 - 1342610 - | UbiD family decarboxylase A1I_07015 1344089 - 1343922 - | UbiD family decarboxylase TERM 1247 1344121 - 1344141 + r 91 -11.2 -3.06162 | opp_overlap 1344116, overlap 1344123 GGATACTAATTGTCA TACTGCGG CTTGA CCGCAGTA TCTTAGGATGCAGTC TERM 1248 1344123 - 1344139 + r 76 -9.4 -3.08813 | opp_overlap 1344116, overlap 1344121 ATACTAATTGTCATA CTGCGG CTTGA CCGCAG TATCTTAGGATGCAG TERM 1249 1344191 - 1344167 - R 93 -11.4 -3.48593 | overlap 1344169 CAGTCTGTGACATAA GACCCCGCAG TCAAG CTGCGGGGTG ACACAACTCATTTAC TERM 1250 1344189 - 1344169 - R 100 -14 -3.31726 | overlap 1344167 GTCTGTGACATAAGA CCCCGCAG TCAAG CTGCGGGG TGACACAACTCATTT A1I_07020 1345762 - 1344203 - | parvulin-like peptidyl-prolyl isomerase TERM 1251 1345838 - 1345816 - R 100 -10 -5.75822 | opp_overlap 1345816 TATAAAGCAAAAAAA CCTACATAGT CAA ACTATATAGG TTTTTTATTACGTAT TERM 1252 1345816 - 1345838 + r 95 -7.8 -5.49234 | opp_overlap 1345816 TATAAAGCAAAAAAA CCTACATAGT CAA ACTATATAGG TTTTTTATTACGTAT TERM 1253 1346290 - 1346317 + r 75 -5.8 -4.73105 | opp_overlap 1346297, overlap 1346297 TGTAGCGGAATCCAG TTAAAAATACTA ATTT TAGTATTTTTCA TTATTTTTTCTGGAT TERM 1254 1346297 - 1346310 + r 70 -3.9 -5.10004 | opp_overlap 1346297, overlap 1346290 GAATCCAGTTAAAAA TACTA ATTT TAGTA TTTTTCATTATTTTT TERM 1255 1346356 - 1346366 + r 76 -6.8 -4.47328 | opp_overlap 1346348, overlap 1346345 CAAGCCACGGCATGA CACC GAG GGTG TTTTCTGATCCACTT A1I_07025 1349381 - 1346481 - | cell surface antigen Sca1 TERM 1256 1347337 - 1347350 + gr 70 -8.1 -2.99056 | overlap 1347316 1347336 GACTCTTCATCACCA GCTGC TATA GCAGC GTTATTATCTTCATT A1I_07030 1349487 - 1349293 - | hypothetical protein A1I_07035 1349902 - 1349648 - | hypothetical protein A1I_07040 1350618 - 1349932 - | hypothetical protein A1I_07045 1351232 - 1350639 - | hypothetical protein A1I_07050 1351372 - 1353342 + | ComEC/Rec2 family protein TERM 1257 1354063 - 1354053 - g 84 -5.4 -5.34309 | ATTATGAAATAAAAA TTGC AGA GCAA GCCAAAAGCTTTAAT TERM 1258 1354490 - 1354507 + G 79 -9.9 -2.85606 | TTGGAACTAGTGTCA TTCCTGC GAAA GCAGGAA TCTAGTAATATATAA A1I_07055 1353326 - 1354522 + | Poly(A) polymerase TERM 1259 1354559 - 1354589 + F 84 -8.6 -4.34789 | opp_overlap 1354566, overlap 1354566 ATTCACGGAATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATTC TERM 1260 1354566 - 1354582 + F 95 -6.7 -5.77677 | opp_overlap 1354566, overlap 1354559 GAATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1261 1354582 - 1354566 - f 78 -6.7 -4.68424 | opp_overlap 1354566 1354559 GAATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1262 1355418 - 1355393 - g 95 -12.1 -3.75933 | opp_overlap 1355398 AGATATTTCAGTAAA TTAGACTCTTT AATT AAAGAGTCTAA TAATAAATGTCTTGT TERM 1263 1355521 - 1355550 + G 100 -13.8 -3.59315 | opp_overlap 1355521 CTGGGATATCAAAAA TATTGATTCCGG AAGCTA CCGGAATCAATA TTTACAGATGATTAA TERM 1264 1355550 - 1355521 - g 100 -13.8 -4.8048 | opp_overlap 1355521 CTGGGATATCAAAAA TATTGATTCCGG AAGCTA CCGGAATCAATA TTTACAGATGATTAA A1I_07060 1354787 - 1355587 + | Zinc/manganese ABC transporter substrate binding protein TERM 1265 1355718 - 1355736 + G 77 -7.6 -4.14013 | overlap 1355717 TTTTATACAAGGAGT TTTAGAAA AAT TTTCTAAA TTTTACCCCGTTTTA TERM 1266 1356430 - 1356408 - g 78 -5.8 -4.86001 | ACCATTTTATAAAAA TTTTAATAAA CGT CTTATTAAAA TGCCGAAATTGTATT A1I_07065 1355692 - 1356837 + | AAA+ superfamily protein uvrA 1359765 - 1356904 - | excinuclease ABC subunit A A1I_07075 1359869 - 1360321 + | single-strand DNA-binding protein A1I_07080 1360528 - 1361355 + | DAP2 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein TERM 1267 1361466 - 1361490 + T 93 -11.4 -3.48593 | overlap 1361468 AGTCAATTTTAATGT CACCCCGTGG CTTGA CCACGGGGTC TTGTATCGCAAACTA TERM 1268 1361468 - 1361488 + T 100 -14 -3.31726 | overlap 1361466 TCAATTTTAATGTCA CCCCGTGG CTTGA CCACGGGG TCTTGTATCGCAAAC TERM 1269 1361536 - 1361516 - T 77 -9.8 -3.03619 | overlap 1361518 AACTACGTCCTAAGA TACCGCAA TCAAG TTGCGGTA TGACAAGGGAAAAAC A1I_07085 1361895 - 1361581 - | hypothetical protein A1I_07090 1362893 - 1361892 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase A1I_07095 1363639 - 1362890 - | DNA repair protein RadC A1I_07100 1364414 - 1363626 - | methionine aminopeptidase TERM 1270 1364533 - 1364517 - R 70 -8.7 -2.6563 | GCTTTTAAGAATTCA GGAGCAA AAT CTGCTCC ATTAGACCAAGCAAT A1I_07105 1365407 - 1364646 - | transposase A1I_07110 1365601 - 1365377 - | transposase TERM 1271 1365761 - 1365780 + H 76 -9.4 -3.06087 | opp_overlap 1365761, overlap 1365753 1365749 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1272 1365780 - 1365761 - H 75 -9.4 -3.01924 | opp_overlap 1365761 1365753 1365749 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1273 1365908 - 1365936 + H 77 -5.5 -4.87665 | overlap 1365911 CTTGGGAACTAGATC CAGTAAAAAATAC GGA GTATTTTTTATTA TTTTTCTGGATACCA TERM 1274 1365911 - 1365933 + H 100 -9.4 -4.5448 | overlap 1365908 GGGAACTAGATCCAG TAAAAAATAC GGA GTATTTTTTA TTATTTTTCTGGATA TERM 1275 1368391 - 1368373 - g 74 -5.2 -4.89729 | overlap 1368376 GAGAAAATGGAAAAA GAAGGGAT AGT ATCCCCAC CGAATCATACAGGTA TERM 1276 1368388 - 1368376 - g 82 -7.7 -4.51654 | overlap 1368373 AAAATGGAAAAAGAA GGGAT AGT ATCCC CACCGAATCATACAG A1I_07115 1366186 - 1368435 + | cell division protein FtsK TERM 1277 1368579 - 1368549 - f 84 -8.6 -4.33182 | opp_overlap 1368556, overlap 1368556 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1278 1368572 - 1368556 - f 95 -6.7 -5.77677 | opp_overlap 1368556, overlap 1368549 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1279 1368556 - 1368572 + F 78 -6.7 -4.67353 | opp_overlap 1368556 1368549 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1280 1370252 - 1370242 - g 77 -4 -5.49809 | TAAAGCCGAAAAAAA TAGA TAA TCTA GCAAGTCAAATAGAT A1I_07120 1368693 - 1370558 + | phosphoglycerol transferase and related proteins TERM 1281 1370573 - 1370563 - T 72 -2.6 -5.46657 | TAGTTGAATAAAAAA TAAT GGT ATTA AGTTATAATTATTTT A1I_07125 1370899 - 1370588 - | SMR-type multi-drug efflux transporter TERM 1282 1371038 - 1371010 - H 81 -6.3 -5.10526 | opp_overlap 1371009 1371010 1371016 1371016 ATACTAAAAAATAAA TAAAAATATTGAA AAT TTTAATATTTTTA ATATTTTTTACTGTC TERM 1283 1371010 - 1371038 + H 70 -8.5 -3.13308 | opp_overlap 1371010, overlap 1371009 1371016 1371016 ATACTAAAAAATAAA TAAAAATATTGAA AAT TTTAATATTTTTA ATATTTTTTACTGTC A1I_07130 1371214 - 1371702 + | ankyrin repeat-containing protein A1I_07135 1371818 - 1371723 - | hypothetical protein A1I_07140 1371877 - 1372422 + | ankyrin repeat-containing protein TERM 1284 1372419 - 1372471 + F 100 -13.9 -2.95177 | opp_overlap 1372425 1372428 1372433, overlap 1372425 1372428 1372458 1372459 AGCAGGATATTACGT TTAGAATAAGTAAAGGATAAGATCT GAA AAATCTTATCCTTTACCTATTTTAG GTTAGTTTTTTAGAA TERM 1285 1372425 - 1372465 + F 100 -12.9 -4.34711 | opp_overlap 1372425 1372428 1372433, overlap 1372419 1372428 1372458 1372459 ATATTACGTTTAGAA TAAGTAAAGGATAAGATCT GAA AAATCTTATCCTTTACCTA TTTTAGGTTAGTTTT TERM 1286 1372465 - 1372425 - f 100 -17.3 -3.3197 | opp_overlap 1372419 1372425 1372428 1372458 1372459, overlap 1372428 1372433 ATATTACGTTTAGAA TAAGTAAAGGATAAGATCT GAA AAATCTTATCCTTTACCTA TTTTAGGTTAGTTTT TERM 1287 1372462 - 1372428 - f 100 -16.8 -3.79906 | opp_overlap 1372425 1372419 1372428 1372458 1372459, overlap 1372425 1372433 TTACGTTTAGAATAA GTAAAGGATAAGATCT GAA AAATCTTATCCTTTAC CTATTTTAGGTTAGT TERM 1288 1372428 - 1372462 + F 100 -14.6 -2.84307 | opp_overlap 1372428 1372425 1372433, overlap 1372425 1372419 1372458 1372459 TTACGTTTAGAATAA GTAAAGGATAAGATCT GAA AAATCTTATCCTTTAC CTATTTTAGGTTAGT TERM 1289 1372457 - 1372433 - f 100 -10.9 -4.11664 | opp_overlap 1372428 1372425 1372419, overlap 1372428 1372425 TTTAGAATAAGTAAA GGATAAGATCT GAA AAATCTTATCC TTTACCTATTTTAGG A1I_07160 1378900 - 1379061 + | hypothetical protein A1I_07165 1381291 - 1379255 - | cell surface antigen Sca13 A1I_07170 1381293 - 1381448 + | hypothetical protein TERM 1290 1381740 - 1381756 + F 70 -8.1 -3.08966 | TTATCATTGGTAGTT CCTTTAA TAG TTAAAGG TTGAGTACCATTTAA TERM 1291 1384056 - 1384073 + F 73 -5.7 -4.65916 | opp_overlap 1384056 CTTAAATATAATTAA TTTTAAC CATA GTTAAAA TTTTATTAAGATGGG infA 1384326 - 1384547 + | translation initiation factor IF-1 A1I_07195 1384550 - 1385158 + | Maf-like protein TERM 1292 1385275 - 1385311 + T 100 -12.7 -3.5241 | opp_overlap 1385285, overlap 1385278 1385285 GCTTGTAGCGGGATC CAGTTAAAAATATCAAT ATT ATTGATATTTTTAGTTG TATTTCTGGACCCTG TERM 1293 1385278 - 1385308 + T 95 -10.8 -3.89695 | opp_overlap 1385285, overlap 1385275 1385285 TGTAGCGGGATCCAG TTAAAAATATCAAT ATT ATTGATATTTTTAG TTGTATTTCTGGACC TERM 1294 1385301 - 1385285 - T 78 -6.7 -4.67353 | opp_overlap 1385285 1385278 1385275 GGATCCAGTTAAAAA TATCAAT ATT ATTGATA TTTTTAGTTGTATTT TERM 1295 1385285 - 1385301 + T 82 -6.7 -5.00412 | opp_overlap 1385285, overlap 1385278 1385275 GGATCCAGTTAAAAA TATCAAT ATT ATTGATA TTTTTAGTTGTATTT A1I_07200 1385815 - 1385399 - | hypothetical protein TERM 1296 1385709 - 1385729 + g 72 -9.1 -2.7263 | opp_overlap 1385707, overlap 1385708 TCTATCATTAAATCC CTATCCAAG CCA TTTGGATAG ATTTCCCGCAATAAT TERM 1297 1385881 - 1385858 - R 83 -10.4 -3.2827 | opp_overlap 1385861 TTATTCAAGTATTAA CCACCACAAA ATAT TTTATGGTGG TTGGGGAGTTAGAAG A1I_07205 1388044 - 1386542 - | ATP/ADP translocase TERM 1298 1387006 - 1386989 - G 72 -8.5 -3.13344 | opp_overlap 1386988 1386989 AGCAGCAACAAACCA GTTATGC ATAC GCATAAC ATTATTACCGATAAT A1I_07210 1388405 - 1389232 + | Poly-beta-hydroxybutyrate polymerase A1I_07215 1389424 - 1390602 + | acetyl-CoA acetyltransferase A1I_07220 1390653 - 1390775 + | transcriptional regulator TERM 1299 1390890 - 1390874 - g 90 -5.9 -5.58179 | opp_overlap 1390874 CAGCACAATAAAAAA TCATCCA TAG TAGATGA TTTTATCGCTAATAA A1I_07225 1390823 - 1390948 + | transcriptional regulator TERM 1300 1391209 - 1391237 + G 74 -8.9 -3.10732 | opp_overlap 1391207 1391233, overlap 1391211 1391233 CATAAAACTAAAGCT CATGGTCTATCAC TTG GAGATAGAGCATG TATTGCACTTGCTAT A1I_07230 1390948 - 1391334 + | putative nucleic-acid-binding protein A1I_07235 1391910 - 1391353 - | hypothetical protein TERM 1301 1392150 - 1392139 - H 78 -4.4 -5.49569 | TAGCAATATAAAAAA GTTG TTTA CAAC CTAACTTTTCATACT TERM 1302 1394511 - 1394501 - g 74 -5.4 -4.84642 | opp_overlap 1394501 CTGAAATGAATAAAA TTGC TTG GCAA AATTTCTTTACGGTT A1I_07240 1392202 - 1395468 + | superfamily I DNA/RNA helicase TERM 1303 1395545 - 1395561 + T 95 -6.7 -5.80727 | opp_overlap 1395545 GATCCAGCTAAAAAA TACTAAT ATT ATTAGTA TTTTTTATTATTTTT TERM 1304 1395561 - 1395545 - T 83 -6.7 -5.09895 | opp_overlap 1395545 GATCCAGCTAAAAAA TACTAAT ATT ATTAGTA TTTTTTATTATTTTT gmk 1396205 - 1395630 - | guanylate kinase A1I_07250 1396450 - 1396211 - | hypothetical protein TERM 1305 1396630 - 1396646 + rH 95 -6.7 -5.77677 | opp_overlap 1396630 GGATCCAGCTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC TERM 1306 1396646 - 1396630 - RH 78 -6.7 -4.67353 | opp_overlap 1396630 GGATCCAGCTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC A1I_07255 1398059 - 1397217 - | rod shape-determining protein MreC A1I_07260 1397968 - 1398075 + | hypothetical protein A1I_07265 1399102 - 1398062 - | rod shape-determining protein MreB A1I_07270 1400367 - 1399279 - | putative permeases TERM 1307 1400503 - 1400455 - R 100 -22 -4.7078 | gap 2, overlap 1400456 GCAATGACGGAAAAA CCGATCCACGCAAGCAA-GCC-CC CGT GGTGGCATTGCCTGCGTGGATCGA AAAACGCCCTCGGTG TERM 1308 1400502 - 1400456 - R 100 -23.3 -3.41745 | gap 2, overlap 1400455 CAATGACGGAAAAAC CGATCCACGCAAGCAA-GCC-CC CGT GGTGGCATTGCCTGCGTGGATCG AAAAACGCCCTCGGT TERM 1309 1400585 - 1400555 - R 84 -8.6 -4.33182 | opp_overlap 1400562, overlap 1400562 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1310 1400562 - 1400578 + r 78 -6.7 -4.67353 | opp_overlap 1400555 1400562 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1311 1400578 - 1400562 - R 95 -6.7 -5.77677 | opp_overlap 1400562, overlap 1400555 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1312 1401103 - 1401067 - R 100 -11.1 -4.14193 | opp_overlap 1401074, overlap 1401074 AGAAGAGTATACAAA TAAAAAAGGTCGAGTAA TAA TTACTTGACCTTTCCTA GCAATACTAAATCTA TERM 1313 1401096 - 1401074 - R 100 -9.2 -5.76237 | opp_overlap 1401074, overlap 1401067 TATACAAATAAAAAA GGTCGAGTAA TAA TTACTTGACC TTTCCTAGCAATACT TERM 1314 1401074 - 1401096 + r 95 -11.4 -3.73953 | opp_overlap 1401074 1401067 TATACAAATAAAAAA GGTCGAGTAA TAA TTACTTGACC TTTCCTAGCAATACT A1I_07275 1401602 - 1401135 - | peptidoglycan-associated lipoprotein precursor A1I_07280 1402929 - 1401976 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1315 1402518 - 1402532 + g 70 -4.3 -4.78848 | TCATTTTTTCAGCAC CTATC AGCAG GATAG TTTTATATTTACCGG rpmF 1403142 - 1402942 - | 50S ribosomal protein L32 A1I_07290 1403231 - 1403704 + | tmRNA-binding protein TERM 1316 1403816 - 1403800 - T 72 -4.5 -4.88407 | opp_overlap 1403788 1403800 1403802, overlap 1403793 1403802 GGATCCAATTAAAAA TACTAAT AAA ATTAGCA TTTTTTAGCTGGATT A1I_07295 1404925 - 1403918 - | TPR repeat-containing protein A1I_07300 1405331 - 1405035 - | TPR repeat-containing protein TERM 1317 1405653 - 1405696 + r 78 -10.5 -2.81316 | overlap 1405652 GATAAGGATATGCCA ACTCTTCATTTATTAGCAG CATAAA CCGCTAGTAAATGAAGAGA ATTATTAGATAATAA A1I_07315 1407717 - 1407013 - | response regulator TERM 1318 1407567 - 1407598 + g 79 -8.3 -4.03696 | TGATAGCAAGGGGTT CATAGAAGAAATA ATTTAA TATTTTTTCTATG TTTATAATCCTTGTT TERM 1319 1407879 - 1407891 + H 75 -4.9 -5.10208 | opp_overlap 1407879 AGTTGCTATAAATAG CTTTA TTT TAAAG TTTTTGTTGGGATTC TERM 1320 1408009 - 1407979 - g 71 -5.6 -4.65446 | overlap 1407981 1407982 1408000 ATGATATAGATAAAA TAGTTGATGATTTT ACT AAAATCATCAAAGA TAATAACGGTGCTAT TERM 1321 1408007 - 1407981 - g 77 -8.2 -3.9328 | overlap 1407979 1407982 1408000 GATATAGATAAAATA GTTGATGATTTT ACT AAAATCATCAAA GATAATAACGGTGCT TERM 1322 1408006 - 1407982 - g 88 -11.7 -2.94884 | overlap 1407981 1407979 1408000 ATATAGATAAAATAG TTGATGATTTT ACT AAAATCATCAA AGATAATAACGGTGC rpsF 1407915 - 1408277 + | 30S ribosomal protein S6 TERM 1323 1408392 - 1408368 - g 74 -9.5 -2.68436 | overlap 1408367 1408365 AACCAATGGAAAGAG CTTCTAAAAAA GTG TTCTTTAGAAG ACGTAAAGGTTGCCC rpsR 1408316 - 1408600 + | 30S ribosomal protein S18 TERM 1324 1408839 - 1408822 - g 74 -7.1 -3.97836 | opp_overlap 1408838, overlap 1408835 1408838 AATAACAAAAATTAA TGATCTT ATTA AAGATCA AAAATTAATTTTTGT TERM 1325 1409144 - 1409112 - g 71 -7.7 -3.5616 | opp_overlap 1409114 1409116, overlap 1409114 1409116 CTGAAAAATCTACAA CAGAGCCTTTAGCTG AGT CAGCTTAAGGCTATC TTCGCTACTCTGCAA rplI 1408616 - 1409137 + | 50S ribosomal protein L9 TERM 1326 1409114 - 1409142 + T 81 -10.3 -3.11768 | opp_overlap 1409112 1409114 1409116, overlap 1409116 GAAAAATCTACAACA GAGCCTTTAGCTG AGT CAGCTTAAGGCTA TCTTCGCTACTCTGC TERM 1327 1409142 - 1409114 - T 83 -10.3 -3.34591 | opp_overlap 1409114 1409116, overlap 1409112 1409116 GAAAAATCTACAACA GAGCCTTTAGCTG AGT CAGCTTAAGGCTA TCTTCGCTACTCTGC TERM 1328 1409140 - 1409116 - T 100 -12.9 -3.22076 | opp_overlap 1409114 1409116, overlap 1409114 1409112 AAAATCTACAACAGA GCCTTTAGCTG AGT CAGCTTAAGGC TATCTTCGCTACTCT TERM 1329 1409116 - 1409140 + T 100 -12.9 -3.11584 | opp_overlap 1409116 1409114 1409112, overlap 1409114 AAAATCTACAACAGA GCCTTTAGCTG AGT CAGCTTAAGGC TATCTTCGCTACTCT A1I_07335 1409916 - 1409794 - | hypothetical protein A1I_07340 1410786 - 1409926 - | hypothetical protein TERM 1330 1410547 - 1410569 + g 100 -12.8 -4.36433 | opp_overlap 1410536 1410547 ATGACTCCAACTTAA TTGGTGCGAC AGT GTCGCACTAA TTTGTTGCTCTTTAA TERM 1331 1410569 - 1410547 - G 83 -10.6 -3.18452 | opp_overlap 1410547, overlap 1410536 ATGACTCCAACTTAA TTGGTGCGAC AGT GTCGCACTAA TTTGTTGCTCTTTAA TERM 1332 1411153 - 1411143 - g 93 -6.8 -5.4433 | ATAGATAAAGAAAAA GCAG TTG CTGC GGCTCTCGCACAGAT recA 1411119 - 1412150 + | recombinase A fabG 1412143 - 1412868 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1333 1412888 - 1412871 - f 71 -5.7 -4.42788 | opp_overlap 1412870 1412876 GTTAATGGTATAAAA TTTTATG CTGG CATAAAA CAATTTTTTGTGCTA acpP 1413021 - 1413266 + | acyl carrier protein TERM 1334 1413283 - 1413261 - f 88 -8.6 -4.46609 | ATAAAAGAACATAAA TCTTAATCTG TGT CAAATTAAGA CCTAATAAAAAATAA TERM 1335 1413498 - 1413481 - g 79 -8.5 -3.80573 | opp_overlap 1413484 TGCAGGACTATTAAA CCATTCT GAAG AGAATGG CTTCAAACTTGAAAA TERM 1336 1413567 - 1413552 - g 70 -6.2 -4.3014 | opp_overlap 1413552 ATAGATTGAGTAAAA TGGATA AATT TATCCA TTATGGCGTTGCAGC A1I_07360 1413305 - 1414585 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1337 1414708 - 1414678 - f 84 -8.6 -4.33785 | opp_overlap 1414685, overlap 1414685 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGACCCCGTGAAT TERM 1338 1414701 - 1414685 - f 95 -6.7 -5.77677 | opp_overlap 1414685, overlap 1414678 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGACCC TERM 1339 1414685 - 1414701 + F 78 -6.7 -4.65895 | opp_overlap 1414685 1414678 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGACCC TERM 1340 1415420 - 1415389 - g 83 -11 -2.92425 | overlap 1415380 1415392 1415393 AATCAACGGCACAGA TAACCTATCCACCT ACTC AGGTGGACAGCTTA GAAGAGCCAGCCTTG TERM 1341 1415417 - 1415392 - g 75 -8.3 -3.60412 | overlap 1415389 1415380 1415393 CAACGGCACAGATAA CCTATCCACCT ACTC AGGTGGACAGC TTAGAAGAGCCAGCC TERM 1342 1415416 - 1415393 - g 87 -11.8 -2.75765 | overlap 1415392 1415389 1415380 AACGGCACAGATAAC CTATCCACCT ACTC AGGTGGACAG CTTAGAAGAGCCAGC TERM 1343 1415961 - 1415940 - g 77 -7.5 -4.06182 | opp_overlap 1415939, overlap 1415938 TTAGCTATAAAAATA CTAAAATTA TCGA TAATTTTAG CTTCCGTGTTAAAAA A1I_07365 1415039 - 1416826 + | ABC transporter ATP-binding protein Uup A1I_07370 1416921 - 1417973 + | hypothetical protein TERM 1344 1418157 - 1418145 - g 76 -3.4 -5.35222 | AAAATCTAGAAAAAA TGGT TAATT ACCA TACAACAACACCTCA A1I_07375 1418024 - 1418254 + | hypothetical protein TERM 1345 1418338 - 1418310 - f 100 -14.9 -3.75418 | overlap 1418303 TACACAAATTCCAAA TTCTATGCATTTT TAA AAAATGCATAGAA CCTAAGTAACCTATC A1I_07380 1418432 - 1419772 + | tRNA-i(6)A37 thiotransferase enzyme MiaB A1I_07385 1420024 - 1422375 + | hypothetical protein A1I_07390 1422532 - 1424907 + | penicillin-binding protein 1A A1I_07395 1424928 - 1425728 + | class D beta-lactamase TERM 1346 1425917 - 1425893 - f 76 -10 -2.8294 | opp_overlap 1425906, overlap 1425880 1425890 1425902 1425906 CAGCGGGGAGAATGA TCCACGCAAG CAAGC CTTGCGAGGA GCGAAGCTTTGTTGC TERM 1347 1425966 - 1425945 - f 73 -8.7 -3.07994 | opp_overlap 1425964 TGCAATCTCATTGAA GCAGCACTC CCGA GATTGCTGC GTCGATGCACGCATC A1I_07400 1426021 - 1427448 + | deoxyribodipyrimidine photo-lyase TERM 1348 1427501 - 1427467 - f 71 -7.4 -3.72592 | opp_overlap 1427466 1427464 1427458 1427469 1427474, overlap 1427469 1427474 AATCTTGATGAATAA TATGAAATTTCGAA TGCAAGC TTCGAAATTTCATG ATATAATCTTTTTAA TERM 1349 1427499 - 1427469 - f 81 -10 -3.44284 | opp_overlap 1427466 1427464 1427458 1427469 1427474, overlap 1427467 1427474 TCTTGATGAATAATA TGAAATTTCGAA TGCAAGC TTCGAAATTTCA TGATATAATCTTTTT TERM 1350 1427469 - 1427499 + F 76 -10 -2.73364 | opp_overlap 1427469 1427467 1427474, overlap 1427466 1427464 1427458 1427474 TCTTGATGAATAATA TGAAATTTCGAA TGCAAGC TTCGAAATTTCA TGATATAATCTTTTT TERM 1351 1428063 - 1428075 + G 80 -6.3 -4.8622 | opp_overlap 1428062 TTTAGAACGAGATAT TCCAA ACC TTGGA TTTTTGATTCCGCCA TERM 1352 1428384 - 1428360 - g 84 -6.5 -5.22794 | opp_overlap 1428367, overlap 1428361 1428362 ACAATTATTAAAAAA TCCAAAACTAG GAG CTAGTTTTGAG GGCTTTGCTTTAGAA TERM 1353 1428383 - 1428361 - g 86 -10 -3.72049 | opp_overlap 1428367, overlap 1428360 1428362 CAATTATTAAAAAAT CCAAAACTAG GAG CTAGTTTTGA GGGCTTTGCTTTAGA TERM 1354 1428382 - 1428362 - g 86 -11.3 -2.82145 | opp_overlap 1428367, overlap 1428361 1428360 AATTATTAAAAAATC CAAAACTAG GAG CTAGTTTTG AGGGCTTTGCTTTAG A1I_07405 1427536 - 1428675 + | ATPase A1I_07410 1428985 - 1428749 - | hypothetical protein TERM 1355 1429110 - 1429133 + r 76 -6.1 -4.68539 | opp_overlap 1429112 ATAAAAATATGATAC TATGTGTGG AATAAA CTACACATA TTTTATACTTTTGAT A1I_07415 1429837 - 1429283 - | hypothetical protein A1I_07420 1430303 - 1429824 - | NADH dehydrogenase subunit I A1I_07425 1431448 - 1430429 - | NADH dehydrogenase subunit H TERM 1356 1430523 - 1430493 - G 71 -5.4 -4.6951 | overlap 1430497 ACCACCCAAAATAAA GTCAGGGGTAGAAA TAC TTTCCACCCTAAAC GCATTAACTGATCAT TERM 1357 1431612 - 1431641 + r 77 -7.2 -4.32951 | gap 1 ATTCTCGCTTTTTTC TG-GATCCCGTGG ACAAG CCACGGGATGACA TTTCTTGCTTAGCCT A1I_07430 1433640 - 1431595 - | NADH dehydrogenase subunit G TERM 1358 1432700 - 1432683 - G 77 -8.5 -3.6217 | overlap 1432681 TTTTAAGCATAAACA TTGCTTC AACG GAAGCAA GAGTCCCAGCAAAAG TERM 1359 1433653 - 1433684 + r 100 -14.8 -4.21936 | opp_overlap 1433659 1433663, overlap 1433640 1433656 1433663 CATTCTTATTCTCTT CAATAAGAAATTAC TTAG GTAATTTCTTATTG TTTTAAAATTGTACA TERM 1360 1433656 - 1433681 + r 100 -10.7 -4.22535 | opp_overlap 1433659 1433663, overlap 1433640 1433653 1433663 TCTTATTCTCTTCAA TAAGAAATTAC TTAG GTAATTTCTTA TTGTTTTAAAATTGT TERM 1361 1433678 - 1433659 - R 72 -8 -3.61715 | opp_overlap 1433640 1433656 1433653 1433663, overlap 1433663 TATTCTCTTCAATAA GAAATTAC TTAG GTAATTTC TTATTGTTTTAAAAT A1I_07435 1434172 - 1433816 - | hypothetical protein A1I_07440 1435023 - 1434184 - | hypothetical protein TERM 1362 1434777 - 1434787 + g 83 -8.2 -4.2349 | opp_overlap 1434777 1434776 1434774 TTGCTAAAAAAGCAT CGGC ATA GCCG TTTTGCATCTCAACA A1I_07445 1437707 - 1435050 - | aconitate hydratase TERM 1363 1435884 - 1435907 + g 70 -4.6 -4.83169 | overlap 1435886 ACTTTGCCATTCTTT TGTTCCGCTA AATA TATCGGAATA TTTTTCTACAAACAT TERM 1364 1437487 - 1437497 + g 100 -6.8 -6.04324 | GGCATAAAATCTATT TCCG CAT CGGA TTTTTTATTTTTTAG TERM 1365 1437850 - 1437820 - H 84 -8.6 -4.33785 | opp_overlap 1437827, overlap 1437827 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1366 1437827 - 1437843 + H 78 -6.7 -4.67353 | opp_overlap 1437827 1437820 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1367 1437843 - 1437827 - H 95 -6.7 -5.77677 | opp_overlap 1437827, overlap 1437820 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC atpC 1437978 - 1438067 + | F0F1 ATP synthase subunit epsilon A1I_07455 1438378 - 1438052 - | F0F1 ATP synthase subunit epsilon TERM 1368 1438415 - 1438461 + r 80 -6.7 -4.70659 | gap 2, overlap 1438416 1438416 ATTATGACTGAACTT TG-TTTC-CTGTCATCCCGTGGT CAA GCCACGGGATGACACCGAGGGCG TTTTTCGATCTACGC TERM 1369 1438416 - 1438460 + r 71 -8 -3.41913 | gap 2, overlap 1438415 1438416 TTATGACTGAACTTT G-TTTC-CTGTCATCCCGTGGT CAA GCCACGGGATGACACCGAGGGC GTTTTTCGATCTACG A1I_07460 1439956 - 1438535 - | F0F1 ATP synthase subunit beta TERM 1370 1439132 - 1439109 - G 83 -10.4 -3.02263 | gap 1 ATATCGGTTGCAAGA GTCGGCTGATA ACC TA-CAGCCGAC GGAATTCTACCAAGT A1I_07465 1440997 - 1440131 - | F0F1 ATP synthase subunit gamma TERM 1371 1440284 - 1440305 + g 71 -8.1 -3.18452 | overlap 1440283 TGATCCTTCTTCACT TGCTCTATT TTGT AGTAGAGCA TAATTTATTTGAGAA TERM 1372 1440434 - 1440455 + g 70 -4.5 -4.74453 | gap 1 TAAGATTTGCTGCTT TGTCATG-CT TTG AGTCATGGCA TTTTTAAATCTATTG TERM 1373 1440693 - 1440717 + g 71 -8.1 -3.35679 | overlap 1440694 ATATCACTTTTTACT TGTTTAATTAT CAT ATAATTAAACG TTCTGCATAAGCCAC TERM 1374 1440694 - 1440716 + g 74 -9.4 -2.61264 | overlap 1440693 TATCACTTTTTACTT GTTTAATTAT CAT ATAATTAAAC GTTCTGCATAAGCCA TERM 1375 1441015 - 1441035 + r 85 -11.2 -2.8511 | AAATCCTTATTGTCA TTCCGTGG CTTGA CCACGGAA TCTAGTAATATACTA TERM 1376 1441153 - 1441123 - R 100 -14.1 -3.08133 | overlap 1441086 1441110 GATCCACGCAGGCAA TGCCATCCCGTGG ACAAG CCACGGAATGACA ACAACTCTAATCAAT A1I_07470 1442698 - 1441160 - | F0F1 ATP synthase subunit alpha TERM 1377 1442816 - 1442765 - R 100 -11.1 -4.18018 | gap 1, opp_overlap 1442758, overlap 1442768 TGCGTTGATCGAAAA GCACTTTCGA-TGTCATCCCGTGG TCAAG CCACGGGATGACAATCAAAAACAT TAACACTCTGCAAAG TERM 1378 1442813 - 1442768 - R 100 -17.2 -3.11208 | gap 1, opp_overlap 1442758, overlap 1442765 GTTGATCGAAAAGCA CTTTCGA-TGTCATCCCGTGG TCAAG CCACGGGATGACAATCAAAAA CATTAACACTCTGCA A1I_07475 1443357 - 1442788 - | F0F1 ATP synthase subunit delta TERM 1379 1442902 - 1442920 + g 74 -8.8 -3.2632 | opp_overlap 1442898, overlap 1442899 ATATTTAATTACGAT CCCTCCCA TAA TGGTAGGG TCTATTTCAAAATTT A1I_07480 1444747 - 1443368 - | dihydrolipoamide dehydrogenase A1I_07485 1445277 - 1444837 - | Strees induced DNA-binding Dps family protein TERM 1380 1445082 - 1445102 + g 95 -11.3 -3.8186 | overlap 1445085 AATTTGATAATGTCG GAACTTTAG CAT CTAAAGTTC TTATTCGTTCAGCTA TERM 1381 1445085 - 1445099 + g 74 -7.2 -4.0342 | overlap 1445082 TTGATAATGTCGGAA CTTTAG CAT CTAAAG TTCTTATTCGTTCAG A1I_07490 1446078 - 1445488 - | cytochrome c biogenesis protein CcmA A1I_07495 1446265 - 1446080 - | NADH dehydrogenase subunit M TERM 1382 1446204 - 1446185 - G 78 -9.4 -3.29541 | opp_overlap 1446185, overlap 1446183 ATTATCAGCAGAATA TGGCAAAT TTTC ATTTGCCA TTTCTTCTACTGTAA TERM 1383 1446185 - 1446204 + g 91 -9.4 -4.3767 | opp_overlap 1446183 1446185 ATTATCAGCAGAATA TGGCAAAT TTTC ATTTGCCA TTTCTTCTACTGTAA A1I_07500 1446501 - 1446262 - | hypothetical protein A1I_07505 1448043 - 1446559 - | NADH dehydrogenase subunit M TERM 1384 1446934 - 1446904 - G 77 -4.1 -5.37345 | overlap 1446905 TGCAATCATAAAAAA CGTTGCAAGCA CCGGCATTT TACTTGCAACA CCACCATATTTAGCT TERM 1385 1447789 - 1447771 - G 74 -5.4 -4.74801 | TAAGCTTACGAAAAA TATTGATA TAC CATCAATA CCTACATGAAATTCA A1I_07510 1450221 - 1448293 - | NADH dehydrogenase subunit L A1I_07515 1450537 - 1450214 - | NADH dehydrogenase subunit K A1I_07520 1451147 - 1450530 - | NADH dehydrogenase subunit J A1I_07525 1452489 - 1451269 - | putative methyltransferase A1I_07530 1453374 - 1452643 - | hypothetical protein A1I_07535 1454327 - 1453419 - | tellurium resistance protein TerC A1I_07540 1457813 - 1454331 - | hypothetical protein TERM 1386 1455277 - 1455251 - G 76 -9.6 -3.11272 | opp_overlap 1455244 1455256 1455269, overlap 1455253 1455255 GAGTAGCATCTAATA TAGAGCCTAAAT TAG ATTTAGGTTCTA ACCTATTTAAATAGT TERM 1387 1455256 - 1455272 + g 73 -8.1 -3.38218 | opp_overlap 1455255 1455253 1455251, overlap 1455244 1455269 GCATCTAATATAGAG CCTAAAT TAG ATTTAGG TTCTAACCTATTTAA TERM 1388 1457348 - 1457362 + g 74 -8.6 -3.28924 | CAGGAGGAGGTGCCA TTGCAG GTA CTGCAA TTCTGGCACAAACTC A1I_07545 1460438 - 1458015 - | VirB4 TERM 1389 1459390 - 1459418 + g 88 -8.9 -4.27467 | opp_overlap 1459387 1459386 1459385 AGTTTAAAAAGCTCT CTTGCAGCTTTTG CAA CAGAAGCAGTAAG TTTATCTTCATCTTC TERM 1390 1460342 - 1460325 - G 72 -8.5 -3.17486 | AATAATTTGTAGTAA CTTACCA TCCT TGGTAAG CAAAGTATGCTCATT A1I_07550 1461994 - 1460714 - | seryl-tRNA synthetase TERM 1391 1461758 - 1461772 + g 77 -8.6 -3.5812 | CTCTAGCTTTTCATT GATGTC CTT GACATC TCTTTGTAATCCCTC A1I_07555 1462727 - 1461981 - | Sec-independent protein translocase protein TatC A1I_07560 1464062 - 1462803 - | AmpG TERM 1392 1464103 - 1464089 - R 74 -7.2 -3.92542 | TGTATTTTTAAAGAA TAAGGT GCG ACCTTA GAAAATATCTTACCT A1I_07565 1466577 - 1464064 - | hypothetical protein TERM 1393 1465898 - 1465910 + g 76 -3.5 -5.38321 | opp_overlap 1465898 TATGATATCACAGGA TTATT AGG AATAA TTTTTTCTACTGTTT TERM 1394 1466097 - 1466112 + g 70 -4.6 -4.77157 | opp_overlap 1466087, overlap 1466099 ATATAGCTTTTCCAA GCGGCA GCCC TGCCCC TTTTTCATCGGTTAA TERM 1395 1466312 - 1466296 - G 71 -5.3 -4.58213 | TAATGAATTAGAAAA TAAATTT TTG AAATTTA AAGTAATATCAAGGT TERM 1396 1467761 - 1467775 + G 72 -5.8 -4.42974 | opp_overlap 1467761 1467760 AAATTCTCAAAAAAC TTTTCA AAA TGAAAA TTTGTTATATCTAGA A1I_07570 1466682 - 1467986 + | UDP-glucose 6-dehydrogenase TERM 1397 1468776 - 1468764 - g 79 -3.4 -5.53991 | opp_overlap 1468769, overlap 1468765 1468767 TATTCAGCAAAAAAA GCAT GCATG ATGC ACATGATGTATTATT TERM 1398 1470698 - 1470674 - g 88 -8.6 -4.4773 | opp_overlap 1470674, overlap 1470676 GGAGACCAATTAAAA GATACTGCGG TCAAG CCGCAGTATG ACATTGATAGTTCTA TERM 1399 1470696 - 1470676 - g 90 -11.2 -3.84039 | opp_overlap 1470674, overlap 1470674 AGACCAATTAAAAGA TACTGCGG TCAAG CCGCAGTA TGACATTGATAGTTC dnaE 1468151 - 1471669 + | DNA polymerase III subunit alpha A1I_07580 1472075 - 1471683 - | transposase A1I_07585 1472659 - 1472084 - | transposase TERM 1400 1472609 - 1472591 - G 80 -6 -5.05782 | opp_overlap 1472591, overlap 1472593 ATGCATCTCAAAAAA CTCTTTAG AAA CTAAAGGG TTTTCAAACGCACTT TERM 1401 1472591 - 1472609 + g 79 -8.2 -4.08064 | opp_overlap 1472591 1472593 ATGCATCTCAAAAAA CTCTTTAG AAA CTAAAGGG TTTTCAAACGCACTT TERM 1402 1472708 - 1472724 + r 81 -4.5 -5.4505 | CATTATTACAATTAT TTCAATT AAA GATTGAA TTTTTTATTACAACG A1I_07590 1474064 - 1472742 - | hypothetical protein TERM 1403 1473272 - 1473284 + g 74 -7.7 -3.9009 | GCTGCTTTTTCATGC CTGCT ATA AGCAG TTTATGCAGTAAATT TERM 1404 1473377 - 1473395 + g 78 -6.6 -4.38114 | overlap 1473359 AAAAATTAGCCGAAT GGCGGGTG ATT TGCCTGCC TTTATTATCCCTTTT A1I_07595 1475923 - 1474067 - | hypothetical protein A1I_07600 1476189 - 1476019 - | hypothetical protein A1I_07605 1476797 - 1476198 - | acetoacetyl-CoA reductase A1I_07610 1476915 - 1476829 - | hypothetical protein A1I_07615 1479029 - 1476918 - | hypothetical protein TERM 1405 1477395 - 1477420 + g 79 -9.9 -2.83163 | opp_overlap 1477400, overlap 1477390 1477388 1477394 1477400 AGTATGACCTGCTTT TAAAAGCTGTT CATC AGCAGCTTTTA CTTCTATTCCTAATC TERM 1406 1477400 - 1477415 + g 71 -5.4 -4.56314 | opp_overlap 1477400, overlap 1477390 1477388 1477395 1477394 GACCTGCTTTTAAAA GCTGTT CATC AGCAGC TTTTACTTCTATTCC TERM 1407 1478494 - 1478505 + g 70 -4.4 -4.84761 | TTCTGAAAATCTTTT GCTA CATT TAGC TTTTTATGCACCTCT TERM 1408 1478774 - 1478788 + g 79 -8.6 -3.84639 | GAGGATCTTTAGCAT TTCGTG CAT CACGAA TTATTATCGGTGTTG TERM 1409 1479931 - 1479917 - g 77 -4.2 -5.41143 | GATGCTCTAAAAAAA TACGGC AGA GACGTA ACTGAGCTTGCTGAA TERM 1410 1481395 - 1481430 + G 78 -9 -3.39407 | gap 1, opp_overlap 1481392 1481414, overlap 1481387 TGTTGGATATGATCA GGGTGGAGTCCTTACCG AAG CCGTAA-GACGCCGCCC TTATCAAGTTATATT A1I_07620 1479425 - 1482001 + | ClpB A1I_07625 1482038 - 1482283 + | hypothetical protein A1I_07630 1482270 - 1482596 + | PemK-like growth inhibitor TERM 1411 1482729 - 1482704 - f 73 -3.5 -5.31456 | gap 1 GCAATCCAGAAAAAA TAATAAAAATGC TAT GCATTTT-ACTA GATTGCTTCGTCAAA TERM 1412 1483518 - 1483508 - f 82 -4 -5.51046 | GAAATATATAAAAAA TCTT TCC AAGA GATAAAATTATATGA TERM 1413 1483624 - 1483646 + F 80 -10 -3.24365 | opp_overlap 1483616 1483623 1483621, overlap 1483621 1483625 CATAGAATAAATTAT TTAGTCAACA TAT TGTTGACTAG TATTATAAGCTATAA TERM 1414 1483625 - 1483645 + F 85 -11.3 -2.54298 | opp_overlap 1483616 1483623 1483621, overlap 1483624 1483621 ATAGAATAAATTATT TAGTCAACA TAT TGTTGACTA GTATTATAAGCTATA A1I_07635 1483694 - 1483954 + | cytotoxic translational repressor of toxin-antitoxin (TA) system RelE A1I_07640 1483951 - 1484313 + | Phage-related transcriptional regulator A1I_07645 1485207 - 1484365 - | hypothetical protein TERM 1415 1485280 - 1485294 + H 74 -8.6 -3.322 | CGAACCTCTGACCTA CGGATT AGA AATCCG TTGCTCTATCCAGCT rpsP 1485327 - 1485542 + | 30S ribosomal protein S16 TERM 1416 1486055 - 1486027 - T 83 -7.7 -4.61527 | opp_overlap 1486033 1486036, overlap 1486028 1486033 AAAATTTGGTAAAAA TTAAAATAACTTA TAA TAAGTTATTTTAC TGGACCCCGCAGGTA TERM 1417 1486054 - 1486028 - T 93 -11.2 -3.35832 | opp_overlap 1486033 1486036, overlap 1486027 1486033 AAATTTGGTAAAAAT TAAAATAACTTA TAA TAAGTTATTTTA CTGGACCCCGCAGGT TERM 1418 1486033 - 1486049 + T 74 -6.7 -4.25104 | opp_overlap 1486028 1486027 1486033, overlap 1486036 TGGTAAAAATTAAAA TAACTTA TAA TAAGTTA TTTTACTGGACCCCG TERM 1419 1486049 - 1486033 - T 80 -6.7 -4.77757 | opp_overlap 1486033 1486036, overlap 1486028 1486027 TGGTAAAAATTAAAA TAACTTA TAA TAAGTTA TTTTACTGGACCCCG A1I_07655 1486464 - 1486129 - | 30S ribosomal protein S16 rpmG 1486647 - 1486477 - | 50S ribosomal protein L33 TERM 1420 1486535 - 1486552 + g 72 -8.5 -2.9916 | opp_overlap 1486541, overlap 1486534 TTTGGATCGTATTTA CGAAAAG AAAG CTTTTCG GTTTGCGTTTTTGGA A1I_07665 1487719 - 1486880 - | coproporphyrinogen III oxidase A1I_07670 1488974 - 1487703 - | proline/betaine transporter TERM 1421 1489069 - 1489081 + r 76 -7.7 -3.93136 | AAAATTTGCCCTTTT TGCAC GTC GTGCA TTTGTAGCTAAATCT A1I_07675 1489725 - 1489045 - | hypothetical protein A1I_07680 1489939 - 1489694 - | hypothetical protein A1I_07685 1490116 - 1489994 - | hypothetical protein TERM 1422 1490271 - 1490293 + r 79 -5.6 -5.08824 | AATCAAAATTATCTA GTAGGAACTT TTG GGGTTTCTAC TTTTTTAAGTGCGGC A1I_07690 1491187 - 1490264 - | hypothetical protein TERM 1423 1490652 - 1490677 + g 85 -9.1 -4.10429 | opp_overlap 1490649, overlap 1490655 TCTAAAAACTGATTA TCCTTTTCTGC AGAA GCAGAAAATGA TTTTAAAAACTCATT TERM 1424 1490655 - 1490674 + g 76 -9.4 -3.08508 | opp_overlap 1490649, overlap 1490652 AAAAACTGATTATCC TTTTCTGC AGAA GCAGAAAA TGATTTTAAAAACTC A1I_07695 1492086 - 1491307 - | oxidoreductase A1I_07700 1492237 - 1492428 + | hypothetical protein A1I_07710 1494481 - 1494209 - | hypothetical protein mutL 1492425 - 1494260 + | DNA mismatch repair protein A1I_07715 1494707 - 1494456 - | antitoxin of toxin-antitoxin (TA) system Phd TERM 1425 1494865 - 1494879 + H 72 -7.8 -3.63627 | TAGAATCTTTTTGAA GCAGCT AAA GGCTGC TTTGGGGTGTCGAAA A1I_07720 1495112 - 1495528 + | hypothetical protein TERM 1426 1495635 - 1495602 - T 82 -6.4 -5.31456 | gap 1, opp_overlap 1495602 1495605 1495612, overlap 1495605 1495612 GCAATCCAGAAAAAA TAATAAAAAATGCTA TAAAT TAGCATTTTTTA-TA CTTCCTTACTTCGTA TERM 1427 1495605 - 1495633 + T 78 -10.6 -2.87354 | opp_overlap 1495605 1495602 1495612, overlap 1495602 1495612 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTACTTCG TERM 1428 1495633 - 1495605 - T 100 -10.6 -4.73105 | opp_overlap 1495602 1495605 1495612, overlap 1495602 1495612 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTACTTCG TERM 1429 1495612 - 1495626 + T 78 -4.3 -5.38249 | opp_overlap 1495612 1495605 1495602, overlap 1495605 1495602 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT TERM 1430 1495626 - 1495612 - T 88 -4.3 -5.80727 | opp_overlap 1495605 1495602 1495612, overlap 1495605 1495602 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT sdhB 1496466 - 1495681 - | succinate dehydrogenase iron-sulfur subunit A1I_07730 1496709 - 1496518 - | hypothetical protein A1I_07735 1497118 - 1496801 - | hypothetical protein A1I_07740 1497593 - 1497099 - | site-specific DNA methylase A1I_07745 1498032 - 1497535 - | site-specific DNA methylase A1I_07750 1499969 - 1498056 - | ATP-dependent metalloprotease FtsH A1I_07755 1501329 - 1500037 - | tRNA(Ile)-lysidine synthetase TERM 1431 1501097 - 1501080 - G 76 -3.5 -5.48825 | gap 1 GATGATCGAAAAAAA GGCTATAA AAC TTA-AGCC CTAAATCGTTAGCAG A1I_07760 1501394 - 1501654 + | hypothetical protein A1I_07765 1501952 - 1501614 - | putative hemagglutinin protein A1I_07770 1502224 - 1501949 - | hypothetical protein A1I_07775 1502390 - 1502289 - | hypothetical protein A1I_07780 1503989 - 1502451 - | hypothetical protein TERM 1432 1503646 - 1503632 - G 77 -10 -2.71011 | opp_overlap 1503631 AGCCGCCGGCAAGCA TCGCAG TAG CTGCGA CTATAGTGTCGTTCC A1I_07785 1504468 - 1504061 - | hypothetical protein A1I_07790 1506592 - 1504487 - | putative hemagglutinin protein TERM 1433 1505976 - 1505962 - GR 77 -10 -2.71011 | opp_overlap 1505961 AGCCGCCGGCAAGCA TCGCAG TAG CTGCGA CTATAGTGTCGTTCC A1I_07795 1506869 - 1506564 - | putative hemagglutinin protein A1I_07800 1507369 - 1507016 - | putative Zn-dependent hydrolase A1I_07805 1507622 - 1507518 - | hypothetical protein A1I_07810 1507956 - 1507603 - | putative Zn-dependent hydrolase A1I_07815 1508448 - 1507966 - | hypothetical protein TERM 1434 1508009 - 1508025 + g 77 -3.8 -5.49729 | GATCGTTTAGCTTGC TCTTTT TCTAC AAAAGA TTTTTTTGGCTCATT A1I_07820 1509909 - 1508689 - | aspartate kinase rpmA 1510466 - 1510206 - | 50S ribosomal protein L27 TERM 1435 1510323 - 1510333 + g 74 -5.4 -4.84017 | AATCCCAACATTTAC TCCA GGA TGGA TTTTTGTACCACGTT rplU 1510823 - 1510506 - | 50S ribosomal protein L21 A1I_07835 1511364 - 1511023 - | putative pterin-4-alpha-carbinolamine dehydratase TERM 1436 1511238 - 1511204 - G 79 -7.3 -4.38154 | opp_overlap 1511203 1511212 ATAGGTTGCATAAAA TCAGGAAATTTATAC TTTTT GTATAGATGTCCTGA CTCATTCACTATCCA phhA 1512126 - 1511386 - | phenylalanine 4-monooxygenase TERM 1437 1512227 - 1512195 - R 100 -16.4 -3.44553 | opp_overlap 1512191, overlap 1512188 1512187 1512196 TTAAAAACGTCATAA TTGTCATCCCGTGG CTTGT CCACGGGATGACAC CGAATGCTTAAGACA TERM 1438 1512226 - 1512196 - R 100 -19.9 -2.66009 | opp_overlap 1512191, overlap 1512195 1512188 1512187 TAAAAACGTCATAAT TGTCATCCCGTGG CTTGT CCACGGGATGACA CCGAATGCTTAAGAC A1I_07845 1513156 - 1512557 - | phosphatidylglycerophosphatase A tatA 1513224 - 1513379 + | twin argininte translocase protein A A1I_07855 1513753 - 1514247 + | ankyrin repeat-containing protein TERM 1439 1514337 - 1514360 + TF 70 -9 -2.62928 | opp_overlap 1514336 1514337 1514340, overlap 1514332 1514340 TAAAGCGAGATAAAT CGAGCTTTTA ACTT TAAAAGCTTG CTGTATTTATACTTT A1I_07860 1515581 - 1514463 - | ABC-type transport systems periplasmic component TERM 1440 1514994 - 1515006 + gF 70 -4.1 -4.87665 | ATAAAATTCAGTAAG TGCTA AGG TGGCA TTTTTCTGAATCAAA A1I_07865 1515547 - 1516449 + | putative methyltransferase A1I_07870 1516519 - 1516926 + | hypothetical protein A1I_07875 1517086 - 1517388 + | hypothetical protein TERM 1441 1517386 - 1517436 + T 89 -9.2 -4.20516 | opp_overlap 1517393 1517397, overlap 1517397 GAGTTGAAATTAGAA TAGGAAATAAATAGGTCGTTATGT TAA ACGTAACGACCTATTTAGTAACGA TTTATTAACTACAGC TERM 1442 1517429 - 1517393 - T 100 -16.9 -3.98762 | opp_overlap 1517386 1517397, overlap 1517397 AATTAGAATAGGAAA TAAATAGGTCGTTATGT TAA ACGTAACGACCTATTTA GTAACGATTTATTAA TERM 1443 1517397 - 1517425 + T 100 -15.5 -3.75461 | opp_overlap 1517397 1517393, overlap 1517386 AGAATAGGAAATAAA TAGGTCGTTATGT TAA ACGTAACGACCTA TTTAGTAACGATTTA TERM 1444 1517425 - 1517397 - T 100 -13.3 -4.57787 | opp_overlap 1517386 1517397, overlap 1517393 AGAATAGGAAATAAA TAGGTCGTTATGT TAA ACGTAACGACCTA TTTAGTAACGATTTA A1I_07880 1517602 - 1517441 - | hypothetical protein A1I_07885 1518191 - 1517685 - | Na+/H+ antiporter NhaA TERM 1445 1518020 - 1517995 - G 71 -7.7 -3.53452 | opp_overlap 1517996, overlap 1518010 AAACTAGAGCAAACA CTTCTAAAGGA GAAA TCTTTTAGAAG AACTCCAGAATTCAT A1I_07890 1518534 - 1520087 + | Type I restriction-modification system methyltransferase subunit TERM 1446 1520128 - 1520112 - f 93 -4.5 -6.25741 | AAACAACAAAAAAAA GAAAAAA TAA TTCTTTC AATTTCAAAAAAGTC A1I_07895 1520165 - 1520284 + | succinyl-diaminopimelate desuccinylase A1I_07900 1520347 - 1521522 + | succinyl-diaminopimelate desuccinylase A1I_07905 1521816 - 1522277 + | DNA polymerase III subunit chi A1I_07910 1522274 - 1522405 + | hypothetical protein A1I_07915 1523134 - 1522433 - | Zinc ABC transporter ATP-binding protein A1I_07920 1523755 - 1523291 - | phosphatidylethanolamine-binding protein PEBP TERM 1447 1523827 - 1523850 + r 70 -9 -2.62928 | opp_overlap 1523826 1523827 1523830, overlap 1523822 1523830 TAAAGCGAGATAAAT CGAGCTTTTA ACTT TAAAAGCTTG CTGTATTTATACTTT A1I_07925 1524383 - 1523904 - | 17 kD surface antigen precursor A1I_07930 1524644 - 1525549 + | cation diffusion facilitator family transporter A1I_07935 1525546 - 1526004 + | cytosine deaminase A1I_07940 1526490 - 1526053 - | hypothetical protein hemH 1527580 - 1526516 - | ferrochelatase TERM 1448 1527542 - 1527561 + g 93 -5 -6.04953 | TGGACCTCCTAAATT GAAAAGCA CTAT TGCTATTC TTTTTTTATTTATAT hemE 1528589 - 1527567 - | uroporphyrinogen decarboxylase TERM 1449 1528089 - 1528106 + g 77 -4.3 -5.17353 | TTCTTTTGCTAAGTC TTTATTT TCAT AAATAAA TTTTTTGCTAACTCT