TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.680501 %AT, 1260136 nt, 6508 terms. Intergenic: 0.697991 %AT, H2T: 217865 nt, 1408 terms; T2T: 58195 nt, 874 terms; H2H: 76194 nt, 1271 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|91204815|ref|NC_007940.1| Rickettsia bellii RML369-C, complete genome (length 1522076) RBE_0001 1 - 822 + | hypothetical protein trxA 849 - 1208 + | thioredoxin rfbE 1220 - 1966 + | O-antigen export system ATP-binding protein RfbE rfbA 1963 - 2739 + | O-antigen export system permease protein RfbA TERM 1 3327 - 3303 - g 76 -7.2 -4.17307 | overlap 3301 3305 CAGAAAAAACAAATA GATTCCGCAA TCAAG TTGCGGAATG ACATCTTGTTTGACC TERM 2 3325 - 3305 - g 82 -9.8 -3.63489 | overlap 3303 3301 GAAAAAACAAATAGA TTCCGCAA TCAAG TTGCGGAA TGACATCTTGTTTGA gltD 2736 - 5990 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase lexA 6432 - 6013 - | SOS-response transcriptional repressors (RecA-mediated autopeptidases) RBE_0007 7605 - 6499 - | acyltransferase family protein RBE_0008 8670 - 7636 - | hypothetical protein TERM 3 8371 - 8339 - G 73 -7.7 -3.59803 | opp_overlap 8343 8344, overlap 8344 ACTATATGAAACCAA GGTAATTGTGCAGCA ACC TGCTGCACAAATTCT GTATCCCTATATTCT TERM 4 8343 - 8367 + g 93 -11.5 -3.61239 | opp_overlap 8339 8344, overlap 8344 TATGAAACCAAGGTA ATTGTGCAGCA ACC TGCTGCACAAA TTCTGTATCCCTATA TERM 5 8366 - 8344 - G 100 -15 -3.26998 | opp_overlap 8343 8344, overlap 8339 ATGAAACCAAGGTAA TTGTGCAGCA ACC TGCTGCACAA ATTCTGTATCCCTAT TERM 6 8344 - 8366 + g 100 -15 -2.76261 | opp_overlap 8344 8339, overlap 8343 ATGAAACCAAGGTAA TTGTGCAGCA ACC TGCTGCACAA ATTCTGTATCCCTAT RBE_0009 9258 - 8764 - | hypothetical protein pgsA 9822 - 9277 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase yidC 11525 - 9846 - | putative inner membrane protein translocase component YidC RBE_0012 12370 - 11819 - | hypothetical protein RBE_0013 12824 - 12375 - | hypothetical protein lgt 13055 - 13846 + | prolipoprotein diacylglyceryl transferase RBE_0015 13825 - 14925 + | hypothetical protein TERM 7 15033 - 15003 - T 84 -8.6 -4.33182 | opp_overlap 15010, overlap 15010 GGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCCC TERM 8 15026 - 15010 - T 95 -6.7 -5.77677 | opp_overlap 15010, overlap 15003 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 9 15010 - 15026 + T 78 -6.7 -4.67755 | opp_overlap 15010 15003 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT RBE_0016 15650 - 15171 - | hypothetical protein kefB 17370 - 15643 - | glutathione-regulated potassium-efflux system protein KefB RBE_0018 17707 - 17381 - | Iojap-related protein bolA2 17827 - 18057 + | BolA-like protein proP1 19666 - 18422 - | proline/betaine transporter sam 20538 - 19663 - | S-adenosylmethionine transporter TERM 10 20100 - 20112 + g 73 -7.7 -3.59315 | opp_overlap 20100 20099 TTTCGGGGTTAAAAT CCTCA GCA TGAGG TTTAAGCGTAATTAC ompW 20690 - 21427 + | OmpW family outer-membrane protein TERM 11 21694 - 21675 - f 76 -9.4 -3.06087 | opp_overlap 21675, overlap 21666 21664 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 12 21675 - 21694 + F 75 -9.4 -3.01924 | opp_overlap 21675 21666 21664 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0023 21855 - 22811 + | transposase pntB 22910 - 24307 + | NAD(p) transhydrogenase subunit beta RBE_0025 24362 - 24931 + | hypothetical protein cvpA 25744 - 25085 - | putative colicin V production membrane protein TERM 13 26012 - 25990 - g 90 -9.4 -4.27259 | opp_overlap 25981, overlap 25981 25983 CATATAGATTTAAAA TCATTTTTTA AAA TAAAAAATGA TGAAATAGTAAATCC RBE_0027 25822 - 26391 + | hypothetical protein ftsY 26696 - 27607 + | Signal recognition particle-docking protein FtsY RBE_0029 28385 - 27786 - | Sco2 protein precursor TERM 14 28857 - 28837 - g 72 -8.5 -3.13773 | opp_overlap 28837, overlap 28836 TTCGAGAGTGAAAAT TTTATTAAC TTA GTTAATAAA TATAGTGATGAATCT TERM 15 28837 - 28857 + G 71 -8.5 -2.83343 | opp_overlap 28836 28837 TTCGAGAGTGAAAAT TTTATTAAC TTA GTTAATAAA TATAGTGATGAATCT TERM 16 29124 - 29098 - g 76 -9.6 -3.08327 | overlap 29101 29119 AGCAAAGCCTCAACA CAAGAACTTACC TTA GATAAATTCTTG TTGCCAAAAATTTTG RBE_0030 28639 - 31071 + | hypothetical protein TERM 17 31198 - 31188 - g 95 -5.4 -6.0427 | ATGATACAAAAAAAA TTGC TGA GCAA ATAAAAGATGCTTTA RBE_0031 31151 - 31819 + | hypothetical protein folKP 32280 - 33596 + | folate synthesis bifunctional protein folA 33605 - 34108 + | dihydrofolate reductase TERM 18 34310 - 34294 - g 76 -9.5 -3.05343 | opp_overlap 34294 GGTAGAGGTTTAAGA TCAGCAA GAC TTGCTGA TATATGTAGAGAGTC TERM 19 34294 - 34310 + G 76 -9.5 -2.9914 | opp_overlap 34294 GGTAGAGGTTTAAGA TCAGCAA GAC TTGCTGA TATATGTAGAGAGTC TERM 20 34337 - 34349 + G 80 -7.7 -4.16016 | AGTCAGAAGATCATT GCTCT GTT AGAGC TTTATTGCAAAGTAA recF 34126 - 35208 + | recombination protein F RBE_0035 36218 - 35526 - | hypothetical protein RBE_0036 36985 - 36224 - | TPR repeat-containing protein trmE 38411 - 37074 - | tRNA modification GTPase TrmE TERM 21 38523 - 38480 - H 78 -9.7 -3.11208 | gap 1, overlap 38478 38477 GTGGATCGAAAAGCA CCCTGGGTGTCATACCGTGG CTTGT CCACGGTATGACAGG-AGGA AATGATCCACGCAAA TERM 22 38941 - 38915 - gH 80 -6 -4.98522 | overlap 38917 AAGGCGAGAGAAAAA TATCAATAACAA ATA CTGTTATTGAAA ACGATCCAGCAATAA TERM 23 38939 - 38917 - gH 83 -8.6 -4.11141 | overlap 38915 GGCGAGAGAAAAATA TCAATAACAA ATA CTGTTATTGA AAACGATCCAGCAAT TERM 24 41544 - 41526 - gH 83 -9.6 -3.63092 | opp_overlap 41525, overlap 41524 41527 AGATGTACAGAAAGA CCCTATCA CTG TGACAGGG ATAGGCGATATGTCA TERM 25 41549 - 41527 - gH 80 -10.6 -2.77132 | opp_overlap 41525, overlap 41526 41524 GATGTACAGAAAGAC CCTATCACTG TGA CAGGGATAGG CGATATGTCAGGTGA RBE_0038 38671 - 43026 + | NAD-specific glutamate dehydrogenase RBE_0039 43001 - 43423 + | NAD-specific glutamate dehydrogenase RBE_0040 43426 - 43782 + | hypothetical protein RBE_0041 43992 - 44309 + | hypothetical protein TERM 26 44575 - 44557 - f 83 -10.3 -3.40522 | ATTTTTTTACTAGAA CCCGTGA ATAAA TCACGGG ATGACACTGAAAATA TERM 27 44963 - 44975 + G 70 -6.3 -4.16842 | TGTTTTATGCCGTTT TATGC AAG GCATA TTTATTGCAGGTGAG proP5 44607 - 45860 + | proline/betaine transporter TERM 28 46249 - 46261 + G 76 -6.3 -4.7254 | ATAGTATATATACCT TATGG TCC CCATA TTTTTCATCAAGAAT RBE_0043 45964 - 47037 + | hypothetical protein pntA2 47445 - 47044 - | NAD(P) transhydrogenase subunit alpha pntA1 48728 - 47604 - | NAD(P) transhydrogenase subunit alpha lolA 48797 - 49441 + | Outer membrane lipoprotein-sorting protein LolA dnaX 49678 - 51204 + | DNA polymerase III subunits gamma and tau RBE_0048 51216 - 51539 + | hypothetical protein RBE_0049 51820 - 51596 - | hypothetical protein RBE_0050 52653 - 51841 - | transposase RBE_0051 53261 - 52737 - | hypothetical protein TERM 29 52984 - 52998 + g 74 -8.6 -3.224 | overlap 52982 ATTATTTGATTTGGA GCAAGT ATT ACTTGC TGTTCTAGAACGTTA lipB 53887 - 53258 - | lipoyltransferase greA 54397 - 53909 - | transcription elongation factor GreA sec59 54486 - 55100 + | dolichol kinase TERM 30 55242 - 55268 + G 90 -3.8 -6.04419 | overlap 55262 CAAGAGAAAACCCCA TCTTTTACAGTT AGT GATAGTAAAAGA TTTTTTTATTGTTTT TERM 31 56842 - 56826 - g 72 -3.7 -5.24129 | overlap 56809 TTGTTTTATAAAAAA GAAATCT TAA AGATTGC AAGTGAATTACAAGA dnaG 55104 - 56903 + | DNA primase rpoD 56986 - 58911 + | RNA polymerase sigma factor RpoD TERM 32 58989 - 58959 - gf 100 -9.3 -4.5448 | opp_overlap 58966 58976, overlap 58960 58966 TATCCAGAAAAATAA CTAAAAATATCAG TATTG CTGATATTTTTAA CAGCTTTTGGTGGAA TERM 33 58988 - 58960 - gf 83 -10.6 -3.31603 | opp_overlap 58966 58976, overlap 58959 58966 ATCCAGAAAAATAAC TAAAAATATCAG TATTG CTGATATTTTTA ACAGCTTTTGGTGGA TERM 34 58966 - 58982 + GF 74 -5.9 -4.61527 | opp_overlap 58966 58960 58959, overlap 58976 AAAAATAACTAAAAA TATCAGT ATT GCTGATA TTTTTAACAGCTTTT TERM 35 58982 - 58966 - gf 76 -5.2 -5.10004 | opp_overlap 58966 58976, overlap 58960 58959 AAAAATAACTAAAAA TATCAG TATTG CTGATA TTTTTAACAGCTTTT TERM 36 59747 - 59723 - gf 83 -10.9 -2.81966 | opp_overlap 59730, overlap 59730 GCAAATGTTATTAGA CCGAAAATAAA AGA TTTATTTCCGG AAGGGAGTGATAAAA RBE_0057 58940 - 60463 + | Type I restriction-modification system methyltransferase subunit RBE_0058 60427 - 60999 + | Type I restriction-modification system methyltransferase subunit RBE_0059 61085 - 61564 + | hypothetical protein truA 61641 - 62378 + | tRNA pseudouridine synthase A RBE_0061 62434 - 62757 + | hypothetical protein RBE_0062 62878 - 63183 + | hypothetical protein TERM 37 63222 - 63258 + T 100 -19.1 -4.45485 | opp_overlap 63232 63234 TTTATTCATGGGATT CAGCTAGAAATATCAAT AAT ATTGATGTTTCTAGCTG TTTTCTGGATCTAGT RBE_0063 64239 - 63298 - | nucleotidyltransferase RBE_0064 64868 - 64239 - | hypothetical protein RBE_0065 65837 - 64917 - | transposase proP6 67319 - 66072 - | proline/betaine transporter RBE_0067 67519 - 68979 + | hypothetical protein RBE_0068 69911 - 68985 - | hypothetical protein RBE_0069 70525 - 69908 - | hypothetical protein TERM 38 70554 - 70568 + r 79 -5.8 -5.1675 | overlap 70549 GAAACATCTCTTTAC CTTAAA TAA TTTAAG TTTTTTCGTCAATGA RBE_0070 72075 - 70564 - | hypothetical protein alaS 72154 - 74787 + | alanyl-tRNA synthetase TERM 39 75179 - 75169 - g 74 -4 -5.19916 | opp_overlap 75169 AAAAGACTCAAAAAA TCTA TAG TAGA TATTTTATTTTCTGC RBE_0072 75001 - 75576 + | transposase RBE_0073 75585 - 76034 + | hypothetical protein dnaE 79566 - 76048 - | DNA polymerase III subunit alpha TERM 40 77019 - 77043 + g 88 -8.6 -4.4773 | opp_overlap 77017, overlap 77021 TAGAACTATCAATGT CATACTGCGG CTTGA CCGCAGTATC TTTTAATTGGTCTCC TERM 41 77021 - 77041 + g 90 -11.2 -3.84039 | opp_overlap 77017, overlap 77019 GAACTATCAATGTCA TACTGCGG CTTGA CCGCAGTA TCTTTTAATTGGTCT TERM 42 78941 - 78953 + g 79 -3.4 -5.53991 | opp_overlap 78936, overlap 78940 78938 AATAATACATCATGT GCAT CATGC ATGC TTTTTTTGCTGAATA udg 81035 - 79731 - | UDP-glucose 6-dehydrogenase TERM 43 79956 - 79942 - G 72 -5.8 -4.42974 | opp_overlap 79941 79942 TCTAGATATAACAAA TTTTCA TTT TGAAAA GTTTTTTGAGAATTT TERM 44 81395 - 81411 + G 71 -5.3 -4.58213 | ACCTTGATATTACTT TAAATTT CAA AAATTTA TTTTCTAATTCATTA TERM 45 81610 - 81595 - g 70 -4.6 -4.77157 | overlap 81597 TTAACCGATGAAAAA GGGGCA GGGC TGCCGC TTGGAAAAGTTATAT TERM 46 81809 - 81797 - g 76 -3.5 -5.38321 | opp_overlap 81797 AAACAGTAGAAAAAA TTATT CCT AATAA TCCTGTGATATCATA TERM 47 83604 - 83618 + G 72 -7.2 -3.92542 | AGGTAAGATATTTTC TAAGGT CGC ACCTTA TTCTTTAAAAATACA RBE_0076 81130 - 83643 + | hypothetical protein ampG3 83645 - 84904 + | AmpG TERM 48 85493 - 85505 + G 74 -6.3 -4.35461 | TTTGGTGTTGCCTTT CAACT TCC AGTTG TTTTAATAATATTAA tatC 84980 - 85726 + | Sec-independent protein translocase protein TatC TERM 49 85949 - 85935 - g 77 -8.6 -3.5812 | GAGGGATTACAAAGA GATGTC AAG GACATC AATGAAAAGCTAGAG serS 85713 - 86993 + | seryl-tRNA synthetase TERM 50 87393 - 87410 + G 72 -8.5 -3.17486 | AATGAGCATACTTTG CTTACCA AGGA TGGTAAG TTACTACAAATTATT TERM 51 88345 - 88317 - g 88 -8.9 -4.27467 | opp_overlap 88323 88325 88326 GAAGATGAAGATAAA CTTACTGCTTCTG TTG CAAAAGCTGCAAG AGAGCTTTTTAAACT virB4-2 87297 - 89720 + | VirB4 TERM 52 90380 - 90366 - g 74 -8.6 -3.28924 | GAGTTTGTGCCAGAA TTGCAG TAC CTGCAA TGGCACCTCCTCCTG TERM 53 92451 - 92477 + G 76 -9.6 -3.11272 | opp_overlap 92446 92456 92462, overlap 92453 92455 ACTATTTAAATAGGT TAGAACCTAAAT CTA ATTTAGGCTCTA TATTAGATGCTACTC TERM 54 92472 - 92456 - g 73 -8.1 -3.38218 | opp_overlap 92455 92453 92451, overlap 92446 92462 TTAAATAGGTTAGAA CCTAAAT CTA ATTTAGG CTCTATATTAGATGC RBE_0081 89921 - 93397 + | hypothetical protein terC 93401 - 94309 + | tellurium resistance protein TerC RBE_0083 94354 - 95085 + | hypothetical protein RBE_0084 95239 - 96900 + | putative methyltransferase nuoJ 97022 - 97639 + | NADH dehydrogenase subunit J nuoK 97617 - 97946 + | NADH dehydrogenase subunit K nuoL1 97949 - 99877 + | NADH dehydrogenase subunit L TERM 55 100381 - 100399 + G 74 -5.4 -4.74801 | TGAATTTCATGTAGG TATTGATG GTA TATCAATA TTTTTCGTAAGCTTA TERM 56 101236 - 101266 + G 77 -4.1 -5.37345 | overlap 101237 AGCTAAATATGGTGG TGTTGCAAGTA AAATGCCGG TGCTTGCAACG TTTTTTATGATTGCA nuoM 100127 - 101611 + | NADH dehydrogenase subunit M TERM 57 101985 - 101966 - f 100 -9.4 -4.3767 | opp_overlap 101966 101964 TTACAGTAGAAGAAA TGGCAAAT GAAA ATTTGCCA TATTCTGCTGATAAT TERM 58 101966 - 101985 + F 78 -9.4 -3.29541 | opp_overlap 101966, overlap 101964 TTACAGTAGAAGAAA TGGCAAAT GAAA ATTTGCCA TATTCTGCTGATAAT ccmA 102092 - 102682 + | cytochrome c biogenesis protein CcmA TERM 59 103088 - 103068 - g 95 -11.3 -3.8186 | overlap 103071 TAGCTGAACGAATAA GAACTTTAG ATG CTAAAGTTC CGACATTATCAAATT TERM 60 103085 - 103071 - g 74 -7.2 -4.0342 | overlap 103068 CTGAACGAATAAGAA CTTTAG ATG CTAAAG TTCCGACATTATCAA RBE_0090 102893 - 103333 + | Strees induced DNA-binding Dps family protein TERM 61 103321 - 103341 + F 74 -9 -3.31726 | overlap 103319 AAGTTCTCTGTGTCA TCCTGCGA CTTGA TCGCGGGA TCTTGTATCACAGAC lpdA1 103423 - 104802 + | dihydrolipoamide dehydrogenase TERM 62 105268 - 105250 - g 74 -8.8 -3.2632 | opp_overlap 105247, overlap 105248 AAATTTTGAAATAGA CCCTACCA TTA TGGGAGGG ATCGTAATTAAATAT TERM 63 105354 - 105405 + G 100 -11.1 -4.18018 | gap 1, opp_overlap 105396, overlap 105357 CTTTGCAGAGTGTTA ATGTTTTTGATTGTCATCCCGTGG CTTGA CCACGGGATGACA-TCGAAAGTGC TTTTCGATCAACGCA atpH 104813 - 105382 + | F0F1 ATP synthase subunit delta TERM 64 105357 - 105402 + F 100 -17.2 -3.11208 | gap 1, opp_overlap 105396, overlap 105354 TGCAGAGTGTTAATG TTTTTGATTGTCATCCCGTGG CTTGA CCACGGGATGACA-TCGAAAG TGCTTTTCGATCAAC RBE_0093 105472 - 106227 + | ATP synthase alpha chain RBE_0094 106136 - 107011 + | ATP synthase alpha chain TERM 65 107156 - 107136 - f 85 -11.2 -2.8511 | TAGTATATTACTAGA TTCCGTGG TCAAG CCACGGAA TGACAATAAGGATTT TERM 66 107737 - 107716 - g 70 -4.5 -4.74453 | gap 1 CAATAGATTTAAAAA TGCCATGACT CAA AG-CATGACA AAGCAGCAAATCTTA TERM 67 107887 - 107866 - g 71 -8.1 -3.18452 | overlap 107864 TTCTCAAATAAATTA TGCTCTACT ACAA AATAGAGCA AGTGAAGAAGGATCA atpG 107174 - 108040 + | F0F1 ATP synthase subunit gamma TERM 68 109039 - 109062 + G 83 -10.4 -3.02263 | gap 1 ACTTGGTAGAATTCC GTCGGCTG-TA GGT TATCAGCCGAC TCTTGCAACCGATAT atpD 108215 - 109636 + | F0F1 ATP synthase subunit beta atpC 109820 - 110146 + | F0F1 ATP synthase subunit epsilon TERM 69 110348 - 110378 + F 84 -8.6 -4.33785 | opp_overlap 110355, overlap 110355 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 70 110371 - 110355 - f 78 -6.7 -4.67353 | opp_overlap 110355 110348 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 71 110355 - 110371 + F 95 -6.7 -5.77677 | opp_overlap 110355, overlap 110348 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 72 110711 - 110701 - g 100 -6.8 -6.04324 | CTAAAAAATAAAAAA TCCG ATG CGGA AATAGATTTTATGCC TERM 73 112314 - 112291 - g 70 -4.6 -4.83169 | overlap 112293 ATGTTTGTAGAAAAA TATTCCGATA TATT TAGCGGAACA AAAGAATGGCAAAGT acnA 110491 - 113148 + | aconitate hydratase TERM 74 113421 - 113411 - g 83 -8.2 -4.2349 | opp_overlap 113410 113408 113411 TGTTGAGATGCAAAA CGGC TAT GCCG ATGCTTTTTTAGCAA RBE_0099 113175 - 114014 + | hypothetical protein RBE_0100 114026 - 114382 + | hypothetical protein TERM 75 114545 - 114514 - f 100 -14.8 -4.21936 | opp_overlap 114520 114524, overlap 114517 114524 114537 TGTACAATTTTAAAA CAATAAGAAATTAC CTAA GTAATTTCTTATTG AAGAGAATAAGAATG TERM 76 114542 - 114517 - f 100 -10.7 -4.22535 | opp_overlap 114520 114524, overlap 114514 114524 114537 ACAATTTTAAAACAA TAAGAAATTAC CTAA GTAATTTCTTA TTGAAGAGAATAAGA TERM 77 114520 - 114539 + F 72 -8 -3.61715 | opp_overlap 114517 114514 114524 114537, overlap 114524 ATTTTAAAACAATAA GAAATTAC CTAA GTAATTTC TTATTGAAGAGAATA TERM 78 115498 - 115515 + G 77 -8.5 -3.6217 | overlap 115497 CTTTTGCTGGGACTC TTGCTTC CGTT GAAGCAA TGTTTATGCTTAAAA TERM 79 116586 - 116557 - g 76 -7.2 -4.32951 | gap 1 AGGCTAAGCAAGAAA TGTCATCCCGTGG CTTGT CCACGGGATC-CA GAAAAAAGCGAGAAT nuoG 114558 - 116603 + | NADH dehydrogenase subunit G TERM 80 117675 - 117705 + G 71 -5.4 -4.6951 | overlap 117679 ATGATCAGTTAATGC GTTTAGGGTGGAAA GTA TTTCTACCCCTGAC TTTATTTTGGGTGGT nuoH 116750 - 117769 + | NADH dehydrogenase subunit H nuoI 117895 - 118374 + | NADH dehydrogenase subunit I RBE_0104 118361 - 118915 + | hypothetical protein TERM 81 119088 - 119065 - T 100 -9.7 -4.68539 | opp_overlap 119064 119067 ATCAAAAGTATAAAA TATGTGTGG CTTATT CCACACATA GTATCATATTTTTAT RBE_0105 120662 - 119523 - | ATPase TERM 82 119814 - 119838 + g 84 -6.5 -5.22794 | opp_overlap 119821, overlap 119815 119816 TTCTAAAGCAAAGCC CTCAAAACTAG CTC CTAGTTTTGGA TTTTTTAATAATTGT TERM 83 119815 - 119837 + g 86 -10 -3.72049 | opp_overlap 119821, overlap 119814 119816 TCTAAAGCAAAGCCC TCAAAACTAG CTC CTAGTTTTGG ATTTTTTAATAATTG TERM 84 119816 - 119836 + g 86 -11.3 -2.82145 | opp_overlap 119821, overlap 119815 119814 CTAAAGCAAAGCCCT CAAAACTAG CTC CTAGTTTTG GATTTTTTAATAATT TERM 85 120135 - 120123 - G 80 -6.3 -4.8622 | opp_overlap 120122 TGGCGGAATCAAAAA TCCAA GGT TTGGA ATATCTCGTTCTAAA TERM 86 120697 - 120731 + r 71 -7.4 -3.72592 | opp_overlap 120696 120694 120689 120699 120704, overlap 120699 120704 TTAAAAAGATTATAT CATGAAATTTCGAA GCTTGCA TTCGAAATTTCATA TTATTCATCAAGATT TERM 87 120699 - 120729 + r 81 -10 -3.44284 | opp_overlap 120696 120694 120689 120699 120704, overlap 120697 120704 AAAAAGATTATATCA TGAAATTTCGAA GCTTGCA TTCGAAATTTCA TATTATTCATCAAGA TERM 88 120729 - 120699 - R 76 -10 -2.73364 | opp_overlap 120699 120697 120704, overlap 120696 120694 120689 120704 AAAAAGATTATATCA TGAAATTTCGAA GCTTGCA TTCGAAATTTCA TATTATTCATCAAGA phrB 122177 - 120750 - | deoxyribodipyrimidine photo-lyase TERM 89 122232 - 122253 + r 73 -8.7 -3.18681 | opp_overlap 122219 GATGCGTGCATCGAC GCAGCAATC TCGG GAGTGCTGC TTCATGAGATTGCAA TERM 90 122280 - 122304 + r 77 -10 -2.93549 | opp_overlap 122273, overlap 122273 122277 122285 GCAACAAAGCTTCGC TCCTCGCAAG GCTTG CTTGCGTGGA TCATTCTTCCCGCTG blaD 123269 - 122469 - | class D beta-lactamase mrcA 125665 - 123290 - | penicillin-binding protein 1A RBE_0109 127294 - 125822 - | hypothetical protein RBE_0110 128176 - 127337 - | hypothetical protein miaB 129765 - 128425 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 91 129859 - 129887 + r 100 -14.9 -3.75418 | overlap 129851 GATAGGTTACTTAGG TTCTATGCATTTT TTA AAAATGCATAGAA TTTGGAATTTGTGTA TERM 92 130043 - 130055 + r 74 -3.4 -5.35222 | TGAGGTGTTGTTGTA TGGT AATTA ACCA TTTTTTCTAGATTTT RBE_0112 131279 - 130227 - | hypothetical protein uup 133161 - 131374 - | ABC transporter ATP-binding protein Uup TERM 93 132239 - 132260 + g 77 -7.5 -4.06182 | opp_overlap 132238, overlap 132237 TTTTTAACACGGAAG CTAAAATTA TCGA TAATTTTAG TATTTTTATAGCTAA TERM 94 132780 - 132811 + g 83 -11 -2.92425 | overlap 132771 132783 132784 CAAGGCTGGCTCTTC TAAGCTGTCCACCT GAGT AGGTGGATAGGTTA TCTGTGCCGTTGATT TERM 95 132783 - 132808 + g 75 -8.3 -3.60412 | overlap 132780 132771 132784 GGCTGGCTCTTCTAA GCTGTCCACCT GAGT AGGTGGATAGG TTATCTGTGCCGTTG TERM 96 132784 - 132807 + g 87 -11.8 -2.75765 | overlap 132783 132780 132771 GCTGGCTCTTCTAAG CTGTCCACCT GAGT AGGTGGATAG GTTATCTGTGCCGTT TERM 97 133492 - 133522 + r 84 -8.6 -4.33785 | opp_overlap 133499, overlap 133499 ATTCACGGGGTCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 98 133515 - 133499 - R 78 -6.7 -4.65895 | opp_overlap 133499 133492 GGGTCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 99 133499 - 133515 + r 95 -6.7 -5.77677 | opp_overlap 133499, overlap 133492 GGGTCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC fabF 134895 - 133615 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 100 134633 - 134648 + g 70 -6.2 -4.3014 | opp_overlap 134633 GCTGCAACGCCATAA TGGATA AATT TATCCA TTTTACTCAATCTAT TERM 101 134702 - 134719 + g 79 -8.5 -3.80573 | opp_overlap 134705 TTTTCAAGTTTGAAG CCATTCT CTTC AGAATGG TTTAATAGTCCTGCA TERM 102 134917 - 134939 + r 88 -8.6 -4.46609 | TTATTTTTTATTAGG TCTTAATTTG ACA CAGATTAAGA TTTATGTTCTTTTAT acpP 135194 - 134934 - | acyl carrier protein TERM 103 135312 - 135329 + r 71 -5.7 -4.42788 | opp_overlap 135294 135311 TAGCACAAAAAATTG TTTTATG CCAG CATAAAA TTTTATACCATTAAC fabG 136057 - 135332 - | 3-ketoacyl-(acyl-carrier-protein) reductase recA 137081 - 136050 - | recombinase A TERM 104 137047 - 137057 + g 93 -6.8 -5.4433 | ATCTGTGCGAGAGCC GCAG CAA CTGC TTTTTCTTTATCTAT TERM 105 137653 - 137631 - g 100 -12.8 -4.36433 | opp_overlap 137631 137648 TTAAAGAGCAACAAA TTAGTGCGAC ACT GTCGCACCAA TTAAGTTGGAGTCAT TERM 106 137631 - 137653 + G 83 -10.6 -3.18452 | opp_overlap 137631, overlap 137648 TTAAAGAGCAACAAA TTAGTGCGAC ACT GTCGCACCAA TTAAGTTGGAGTCAT RBE_0118 137399 - 138271 + | hypothetical protein RBE_0119 138281 - 138403 + | hypothetical protein TERM 107 138987 - 139029 + T 93 -11.6 -3.64703 | overlap 138989 ATGTTTGGTGATTAT TATCTTATTTATCCCGTAAT TAA ATTACGGGATAAATAAAGCA TTTGAATAAAGACAA TERM 108 138989 - 139028 + T 89 -11.8 -2.78679 | gap 1, overlap 138987 GTTTGGTGATTATTA TC-TTATTTATCCCGTAAT TAA ATTACGGGATAAATAAAGC ATTTGAATAAAGACA TERM 109 139066 - 139098 + T 72 -7.7 -3.5616 | opp_overlap 139068 139070, overlap 139068 139070 TTGCAGAGTAGCGAA GATAGCCTTAAGCTG ACT CAGCTAAAGGCTCTG TTGTAGATTTTTCAG TERM 110 139096 - 139068 - T 81 -10.3 -3.11768 | opp_overlap 139066 139068 139070, overlap 139070 GCAGAGTAGCGAAGA TAGCCTTAAGCTG ACT CAGCTAAAGGCTC TGTTGTAGATTTTTC TERM 111 139068 - 139096 + T 83 -10.3 -3.34591 | opp_overlap 139068 139070, overlap 139066 139070 GCAGAGTAGCGAAGA TAGCCTTAAGCTG ACT CAGCTAAAGGCTC TGTTGTAGATTTTTC TERM 112 139070 - 139094 + T 100 -12.9 -3.22076 | opp_overlap 139068 139070, overlap 139068 139066 AGAGTAGCGAAGATA GCCTTAAGCTG ACT CAGCTAAAGGC TCTGTTGTAGATTTT TERM 113 139094 - 139070 - T 100 -12.9 -3.11584 | opp_overlap 139070 139068 139066, overlap 139068 AGAGTAGCGAAGATA GCCTTAAGCTG ACT CAGCTAAAGGC TCTGTTGTAGATTTT rplI 139594 - 139073 - | 50S ribosomal protein L9 TERM 114 139371 - 139388 + g 74 -7.1 -3.97836 | opp_overlap 139357, overlap 139357 139354 ACAAAAATTAATTTT TGATCTT TAAT AAGATCA TTAATTTTTGTTATT rpsR 139894 - 139610 - | 30S ribosomal protein S18 TERM 115 139818 - 139842 + g 74 -9.5 -2.68436 | overlap 139817 139816 GGGCAACCTTTACGT CTTCTAAAGAA CAC TTTTTTAGAAG CTCTTTCCATTGGTT rpsF 140295 - 139933 - | 30S ribosomal protein S6 TERM 116 140201 - 140231 + g 71 -5.6 -4.65446 | overlap 140198 140203 140204 ATAGCACCGTTATTA TCTTTGATGATTTT ACT AAAATCATCAACTA TTTTATCTATATCAT TERM 117 140203 - 140229 + g 77 -8.2 -3.9328 | overlap 140198 140201 140204 AGCACCGTTATTATC TTTGATGATTTT ACT AAAATCATCAAC TATTTTATCTATATC TERM 118 140204 - 140228 + g 88 -11.7 -2.94884 | overlap 140198 140203 140201 GCACCGTTATTATCT TTGATGATTTT ACT AAAATCATCAA CTATTTTATCTATAT TERM 119 140331 - 140319 - H 75 -4.9 -5.10208 | opp_overlap 140319 GAATCCCAACAAAAA CTTTA AAA TAAAG CTATTTATAGCAACT TERM 120 140643 - 140612 - g 79 -8.3 -4.03696 | AACAAGGATTATAAA CATAGAAAAAATA TTAAAT TATTTCTTCTATG AACCCCTTGCTATCA RBE_0123 140493 - 141197 + | response regulator aco1 141289 - 142482 + | Acyl-CoA desaturase 1 TERM 121 142555 - 142512 - f 78 -10.5 -2.81316 | overlap 142511 TTATTATCTAATAAT TCTCTTCATTTACTAGCGG TTTATG CTGCTAATAAATGAAGAGT TGGCATATCCTTATC RBE_0125 142868 - 144280 + | TPR repeat-containing protein TERM 122 144382 - 144398 + T 72 -4.5 -4.88407 | opp_overlap 144382 144369 144384, overlap 144375 144384 AATCCAGCTAAAAAA TGCTAAT TTT ATTAGTA TTTTTAATTGGATCC smpA 144967 - 144494 - | tmRNA-binding protein rpmF 145056 - 145256 + | 50S ribosomal protein L32 TERM 123 145680 - 145666 - g 70 -4.3 -4.78848 | CCGGTAAATATAAAA CTATC CTGCT GATAG GTGCTGAAAAAATGA fabH 145269 - 146222 + | 3-oxoacyl-(acyl carrier protein) synthase III pal 146596 - 147063 + | peptidoglycan-associated lipoprotein precursor TERM 124 147095 - 147131 + F 100 -16.9 -4.14193 | opp_overlap 147102, overlap 147102 TAGATTTAGTATTGC TAGGAAAGGTCGAGTAA TTA TTACTCGACCTTTTTTA TTTGTATACTCTTCT TERM 125 147102 - 147124 + F 100 -15 -5.76237 | opp_overlap 147102, overlap 147095 AGTATTGCTAGGAAA GGTCGAGTAA TTA TTACTCGACC TTTTTTATTTGTATA TERM 126 147124 - 147102 - f 100 -15 -3.73953 | opp_overlap 147095 147102 AGTATTGCTAGGAAA GGTCGAGTAA TTA TTACTCGACC TTTTTTATTTGTATA TERM 127 147613 - 147643 + F 84 -8.6 -4.33182 | opp_overlap 147620, overlap 147620 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 128 147636 - 147620 - f 78 -6.7 -4.67353 | opp_overlap 147613 147620 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 129 147620 - 147636 + F 95 -6.7 -5.77677 | opp_overlap 147620, overlap 147613 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 130 147695 - 147743 + F 100 -22 -4.7078 | gap 2, overlap 147696 CACCGAGGGCGTTTT TCGATCCACGCAGGCAATGCCACC ACG GG-GGC-TTGCTTGCGTGGATCGG TTTTTCCGTCATTGC TERM 131 147696 - 147742 + F 100 -23.3 -3.41745 | gap 2, overlap 147695 ACCGAGGGCGTTTTT CGATCCACGCAGGCAATGCCACC ACG GG-GGC-TTGCTTGCGTGGATCG GTTTTTCCGTCATTG RBE_0130 147831 - 148919 + | putative permeases mreB 149096 - 150136 + | rod shape-determining protein MreB mreC 150139 - 150981 + | rod shape-determining protein MreC TERM 132 151568 - 151552 - f 95 -6.7 -5.77677 | opp_overlap 151552 GAAAATAATAAAAAA TACTAAT AAA ATTAGTA TTTTTAGCTGGATCC TERM 133 151552 - 151568 + F 78 -6.7 -4.67353 | opp_overlap 151552 GAAAATAATAAAAAA TACTAAT AAA ATTAGTA TTTTTAGCTGGATCC RBE_0133 151733 - 151987 + | hypothetical protein gmk 151993 - 152568 + | guanylate kinase TERM 134 152637 - 152653 + T 83 -6.7 -5.09895 | opp_overlap 152637 AAAAATAATAAAAAA TACTAAT AAT ATTAGTA TTTTTTAGCTGGATC TERM 135 152653 - 152637 - T 95 -6.7 -5.80727 | opp_overlap 152637 AAAAATAATAAAAAA TACTAAT AAT ATTAGTA TTTTTTAGCTGGATC RBE_0135 155996 - 152730 - | superfamily I DNA/RNA helicase TERM 136 153687 - 153697 + g 74 -5.4 -4.84642 | opp_overlap 153687 AACCGTAAAGAAATT TTGC CAA GCAA TTTTATTCATTTCAG TERM 137 156048 - 156059 + H 78 -4.4 -5.49569 | AGTATGAAAAGTTAG GTTG TAAA CAAC TTTTTTATATTGCTA RBE_0136 156208 - 156846 + | hypothetical protein RBE_0137 157251 - 156865 - | putative nucleic-acid-binding protein TERM 138 156990 - 156962 - G 74 -8.9 -3.10732 | opp_overlap 156950 156960, overlap 156950 156964 ATAGCAAGTGCAATA CATGCTCTATCTC CAA GTGATAGACCATG AGCTTTAGTTTTATG RBE_0138 157547 - 157251 - | transcriptional regulator TERM 139 157309 - 157325 + g 90 -5.9 -5.58179 | opp_overlap 157309 TTATTAGCGATAAAA TCATCTA CTA TGGATGA TTTTTTATTGTGCTG paaJ 158755 - 157598 - | acetyl-CoA acetyltransferase phbC 159835 - 158972 - | Poly-beta-hydroxybutyrate polymerase TERM 140 161198 - 161215 + G 72 -8.5 -3.13344 | opp_overlap 161197 161198 ATTATCGGTAATAAT GTTATGC GTAT GCATAAC TGGTTTGTTGCTGCT tlc5 160160 - 161662 + | ATP/ADP translocase TERM 141 162323 - 162346 + F 83 -10.4 -3.2827 | opp_overlap 162326 CTTCTAACTCCCCAA CCACCATAAA ATAT TTTGTGGTGG TTAATACTTGAATAA RBE_0142 162389 - 162805 + | hypothetical protein TERM 142 162929 - 162893 - T 100 -12.7 -3.5241 | opp_overlap 162903, overlap 162896 162903 CAGGGTCCAGAAATA CAACTAAAAATATCAAT AAT ATTGATATTTTTAACTG GATCCCGCTACAAGC TERM 143 162926 - 162896 - T 95 -10.8 -3.89695 | opp_overlap 162903, overlap 162893 162903 GGTCCAGAAATACAA CTAAAAATATCAAT AAT ATTGATATTTTTAA CTGGATCCCGCTACA TERM 144 162903 - 162919 + T 78 -6.7 -4.67353 | opp_overlap 162896 162893 162903 AAATACAACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC TERM 145 162919 - 162903 - T 82 -6.7 -5.00412 | opp_overlap 162903, overlap 162896 162893 AAATACAACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC maf 163654 - 163046 - | Maf-like protein infA 163878 - 163657 - | translation initiation factor IF-1 RBE_0145 163872 - 164042 + | hypothetical protein TERM 146 164148 - 164131 - fH 73 -5.7 -4.65916 | opp_overlap 164131 CCCATCTTAATAAAA TTTTAAC TATG GTTAAAA TTAATTATATTTAAG RBE_0146 164635 - 165699 + | cell surface antigen Sca9 TERM 147 166463 - 166447 - gf 70 -8.1 -3.08966 | TTAAATGGTACTCAA CCTTTAA CTA TTAAAGG AACTACCAATGATAA RBE_0147 165787 - 167013 + | cell surface antigen Sca9 RBE_0148 166988 - 168910 + | cell surface antigen Sca13 TERM 148 172285 - 172296 + G 70 -7.2 -3.6003 | opp_overlap 172293 ACTATAGTCTTTACT GCCG ATAA CGGC TTTACCGATGATTTA RBE_0149 169759 - 175704 + | cell surface antigen Sca13 TERM 149 175766 - 175714 - T 100 -13.9 -2.95177 | opp_overlap 175720 175723 175728, overlap 175710 175709 175720 175723 TTCTAAAAAACTAAC CTAAAATAGGTAAAGGATAAGATTT TTC AGATCTTATCCTTTACTTATTCTAA ACGTAATATCCTGCT TERM 150 175720 - 175760 + T 100 -17.3 -3.3197 | opp_overlap 175710 175709 175720 175714 175723, overlap 175723 175728 AAAACTAACCTAAAA TAGGTAAAGGATAAGATTT TTC AGATCTTATCCTTTACTTA TTCTAAACGTAATAT TERM 151 175760 - 175720 - T 100 -12.9 -4.34711 | opp_overlap 175720 175723 175728, overlap 175710 175709 175714 175723 AAAACTAACCTAAAA TAGGTAAAGGATAAGATTT TTC AGATCTTATCCTTTACTTA TTCTAAACGTAATAT TERM 152 175723 - 175757 + T 100 -16.8 -3.79906 | opp_overlap 175710 175709 175723 175720 175714, overlap 175720 175728 ACTAACCTAAAATAG GTAAAGGATAAGATTT TTC AGATCTTATCCTTTAC TTATTCTAAACGTAA TERM 153 175757 - 175723 - T 100 -14.6 -2.84307 | opp_overlap 175720 175723 175728, overlap 175710 175709 175720 175714 ACTAACCTAAAATAG GTAAAGGATAAGATTT TTC AGATCTTATCCTTTAC TTATTCTAAACGTAA TERM 154 175728 - 175752 + T 100 -10.9 -4.11664 | opp_overlap 175723 175720 175714, overlap 175723 175720 CCTAAAATAGGTAAA GGATAAGATTT TTC AGATCTTATCC TTTACTTATTCTAAA RBE_0150 176308 - 175763 - | ankyrin repeat-containing protein RBE_0151 176971 - 176483 - | ankyrin repeat-containing protein TERM 155 177149 - 177133 - H 71 -3.1 -5.27399 | GAAGACAGTAAAAAA TATTAAA ATT TTCAATA TTTTTATTTATTTTT RBE_0152 177266 - 177577 + | SMR-type multi-drug efflux transporter TERM 156 177592 - 177602 + T 72 -2.6 -5.46657 | AAAATAATTATAACT TAAT ACC ATTA TTTTTTATTCAACTA RBE_0153 179472 - 177607 - | phosphoglycerol transferase and related proteins TERM 157 177913 - 177923 + g 77 -4 -5.49809 | ATCTATTTGACTTGC TAGA TTA TCTA TTTTTTTCGGCTTTA TERM 158 179586 - 179616 + r 84 -8.6 -4.33182 | opp_overlap 179593, overlap 179593 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 159 179609 - 179593 - R 78 -6.7 -4.67353 | opp_overlap 179593 179586 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 160 179593 - 179609 + r 95 -6.7 -5.77677 | opp_overlap 179593, overlap 179586 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC ftsK 181979 - 179730 - | cell division protein FtsK TERM 161 179774 - 179792 + g 74 -5.2 -4.89729 | overlap 179777 TACCTGTATGATTCG GTGGGGAT ACT ATCCCTTC TTTTTCCATTTTCTC TERM 162 179777 - 179789 + g 82 -7.7 -4.51654 | overlap 179774 CTGTATGATTCGGTG GGGAT ACT ATCCC TTCTTTTTCCATTTT TERM 163 182191 - 182221 + H 84 -8.6 -4.33785 | opp_overlap 182198, overlap 182195 182198 TTCACGGGATCCAGC TAAAAAATACTAAT AAA ATTAGTATTATTTA TTATTTTCTGGATCT TERM 164 182195 - 182217 + H 72 -5 -4.72617 | opp_overlap 182198, overlap 182191 182198 CGGGATCCAGCTAAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 165 182214 - 182198 - H 83 -6.7 -5.09895 | opp_overlap 182195 182191 182198 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 166 182198 - 182214 + H 76 -6.7 -4.42118 | opp_overlap 182198, overlap 182195 182191 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 167 182344 - 182325 - H 76 -9.4 -3.06087 | opp_overlap 182325, overlap 182316 182314 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 168 182325 - 182344 + H 75 -9.4 -3.01924 | opp_overlap 182325 182316 182314 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0155 182505 - 183461 + | transposase TERM 169 183574 - 183590 + F 70 -8.7 -2.6563 | ATTGCTTGGTCTAAT GGAGCAG ATT TTGCTCC TGAATTCTTAAAAGC map 183693 - 184481 + | methionine aminopeptidase radC 184468 - 185217 + | DNA repair protein RadC mraY2 185214 - 186215 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase RBE_0159 186212 - 186526 + | hypothetical protein TERM 170 186641 - 186617 - T 93 -11.4 -3.48593 | overlap 186619 TAGTTTGCGATACAA GACCCCGTGG TCAAG CCACGGGGTG ACATTAAAATTGACT TERM 171 186639 - 186619 - T 100 -14 -3.31726 | overlap 186617 GTTTGCGATACAAGA CCCCGTGG TCAAG CCACGGGG TGACATTAAAATTGA RBE_0160 187579 - 186752 - | DAP2 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein ssb 188238 - 187786 - | single-strand DNA-binding protein uvrA 188342 - 191203 + | excinuclease ABC subunit A RBE_0163 192416 - 191271 - | AAA+ superfamily protein TERM 172 191678 - 191700 + g 78 -5.8 -4.86001 | AATACAATTTCGGCA TTTTAATAAG ACG TTTATTAAAA TTTTTATAAAATGGT TERM 173 192390 - 192372 - G 77 -7.6 -4.14013 | overlap 192381 TAAAACTGGGTAAAA TTTAGAAA ATT TTTCTAAA ACTCCTTGTATAAAA znuA 193408 - 192521 - | Zinc/manganese ABC transporter substrate binding protein TERM 174 192587 - 192558 - G 100 -13.8 -3.59315 | opp_overlap 192558 TTAATCATCTGTAAA TATTGATTCCGG TAGCTT CCGGAATCAATA TTTTTGATATCCCAG TERM 175 192558 - 192587 + g 100 -13.8 -4.8048 | opp_overlap 192558 TTAATCATCTGTAAA TATTGATTCCGG TAGCTT CCGGAATCAATA TTTTTGATATCCCAG TERM 176 192690 - 192715 + g 95 -12.1 -3.75933 | opp_overlap 192695 ACAAGACATTTATTA TTAGACTCTTT AATT AAAGAGTCTAA TTTACTGAAATATCT TERM 177 193549 - 193519 - R 84 -8.6 -4.34789 | opp_overlap 193526, overlap 193526 GAATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATTCCGTGAAT TERM 178 193526 - 193542 + r 78 -6.7 -4.68424 | opp_overlap 193519 193526 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC TERM 179 193542 - 193526 - R 95 -6.7 -5.77677 | opp_overlap 193526, overlap 193519 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC TERM 180 193618 - 193601 - R 76 -9.9 -2.85606 | TTATATATTACTAGA TTCCTGC TTTC GCAGGAA TGACACTAGTTCCAA pcnB 194782 - 193586 - | Poly(A) polymerase TERM 181 194045 - 194055 + g 84 -5.4 -5.34309 | ATTAAAGCTTTTGGC TTGC TCT GCAA TTTTTATTTCATAAT RBE_0166 195593 - 194766 - | ComEC/Rec2 family protein RBE_0167 196735 - 195554 - | ComEC/Rec2 family protein RBE_0168 196875 - 198440 + | hypothetical protein RBE_0169 198629 - 199300 + | hypothetical protein sca1 199875 - 201659 + | cell surface antigen Sca1 TERM 182 201784 - 201774 - f 76 -6.8 -4.47328 | opp_overlap 201780, overlap 201777 AAGTGGATCAGAAAA CACC CTC GGTG TCATGCCGTGGCTTG TERM 183 201850 - 201823 - f 75 -5.8 -4.73105 | opp_overlap 201830, overlap 201830 ATCCAGAAAAAATAA TGAAAAATACTA AAAT TAGTATTTTTAA CTGGATTCCGCTACA TERM 184 201843 - 201830 - f 70 -3.9 -5.10004 | opp_overlap 201830, overlap 201823 AAAAATAATGAAAAA TACTA AAAT TAGTA TTTTTAACTGGATTC TERM 185 202302 - 202324 + F 100 -10 -5.75822 | opp_overlap 202302 ATACGTAATAAAAAA CCTATATAGT TTG ACTATGTAGG TTTTTTTGCTTTATA TERM 186 202324 - 202302 - f 95 -7.8 -5.49234 | opp_overlap 202302 ATACGTAATAAAAAA CCTATATAGT TTG ACTATGTAGG TTTTTTTGCTTTATA surA 202378 - 203937 + | parvulin-like peptidyl-prolyl isomerase TERM 187 203949 - 203973 + F 93 -11.4 -3.48593 | overlap 203951 GTAAATGAGTTGTGT CACCCCGCAG CTTGA CTGCGGGGTC TTATGTCACAGACTG TERM 188 203951 - 203971 + F 100 -14 -3.31726 | overlap 203949 AAATGAGTTGTGTCA CCCCGCAG CTTGA CTGCGGGG TCTTATGTCACAGAC TERM 189 204019 - 203999 - f 91 -11.2 -3.06162 | opp_overlap 203994, overlap 204001 GACTGCATCCTAAGA TACTGCGG TCAAG CCGCAGTA TGACAATTAGTATCC TERM 190 204017 - 204001 - f 76 -9.4 -3.08813 | opp_overlap 203994, overlap 203999 CTGCATCCTAAGATA CTGCGG TCAAG CCGCAG TATGACAATTAGTAT ubiD 204051 - 205529 + | UbiD family decarboxylase RBE_0173 205660 - 206484 + | Poly(3-hydroxyalkanoate) synthetase RBE_0174 206626 - 207408 + | Poly(3-hydroxyalkanoate) synthetase TERM 191 207441 - 207431 - g 72 -2.6 -5.47159 | TGTGAAGAGAAAAAA TAAA AAA TTTA CGGAAATATTTATTG pldA 207417 - 208022 + | phospholipase D superfamily protein PLD RBE_0176 208595 - 208113 - | phasin family protein TERM 192 209223 - 209250 + G 71 -7.8 -3.41878 | opp_overlap 209223, overlap 209244 ACTTGTTCTTATATA TGCTTCAGGTTT ACGA ATATCTGAAGCA TTATCGATTACAAAG xerC 208762 - 209679 + | site-specific tyrosine recombinase XerC dksA 209791 - 210222 + | DnaK suppressor-like protein bcp 210758 - 210291 - | bacterioferritin comigratory protein RBE_0180 210986 - 211411 + | hypothetical protein TERM 193 211515 - 211543 + F 100 -10.6 -4.55383 | opp_overlap 211522, overlap 211522 GTAGCGGGATCCAGT TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTCTGGATT TERM 194 211536 - 211522 - f 72 -4.3 -5.09895 | opp_overlap 211515 211522 GATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 195 211522 - 211536 + F 88 -4.3 -5.80727 | opp_overlap 211522, overlap 211515 GATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT himA 211711 - 211965 + | integration host factor alpha-subunit TERM 196 213153 - 213143 - g 76 -5.4 -5.04385 | GATATTGCTAAAAAA GCTT TAG AAGC AGGAGTAGATATAGT RBE_0182 212291 - 213265 + | Beta-glucosidase spoT11 213504 - 214124 + | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 197 214985 - 214967 - f 73 -9 -3.20367 | TAATAATGGCATTAA TCCTATTT TAC AAATAGGA ACTGCTACTGCTGGT ompB 215049 - 217790 + | Outer membrane protein rOmpB TERM 198 217919 - 217955 + F 72 -7.6 -3.66424 | gap 1, opp_overlap 217914 217927 217929, overlap 217927 217953 TGCTTATATATTTTT TAGAAAAAGTCCTCTTT GAAA AAAGGGGGCTTTTT-TA TTTAAAATAATTTTA TERM 199 217927 - 217948 + F 90 -7.3 -5.64421 | opp_overlap 217927 217929, overlap 217919 TATTTTTTAGAAAAA GTCCTCTTT GAAA AAAGGGGGC TTTTTTATTTAAAAT lpxK 218012 - 218977 + | tetraacyldisaccharide 4'-kinase TERM 200 219282 - 219302 + GT 79 -4.7 -5.19212 | opp_overlap 219282 219283 GAAAATATTAAAAAG CTAAAAGGG CAG CCTTTTTTG TTTTTTACTGGTCAT TERM 201 219545 - 219560 + GT 83 -6.8 -4.78752 | opp_overlap 219545 TCAGAAAATGAATGA CGGCAT TGAA GTGCCG TTTTTAGGTTATCCT htrB 218952 - 219827 + | lipid A biosynthesis lauroyl acyltransferase TERM 202 219909 - 219895 - T 88 -4.3 -5.80727 | opp_overlap 219895 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTCCTTACTAGATT RBE_0187 222273 - 220048 - | hypothetical protein TERM 203 221011 - 221023 + g 76 -3.5 -5.36689 | opp_overlap 221011 ATTATCCATCATCAA TAATT TAA AATTA TTTTCTTTTTCGTTT TERM 204 222130 - 222148 + g 72 -2.5 -5.33848 | AGATTGTTTATATTT GATTAAG TTACT TTTAATC TTTTTTAGTTGTGAT RBE_0188 223231 - 222377 - | periplasmic protein TERM 205 222967 - 222993 + g 72 -2.4 -5.34857 | opp_overlap 222980, overlap 222980 CAAGTTCAGTAGGAT TTTTGTTATGGA ATT TCTGTAAGAAAA TTTTATTTTGTTTAG comJ 224019 - 223231 - | ComJ TERM 206 224023 - 224033 + H 76 -2.6 -5.50723 | ACGGTAGTTCAAAGT TATA GAC TATA TTTTTATTTTAGTAA RBE_0190 224192 - 224914 + | hypothetical protein TERM 207 225009 - 225034 + F 72 -4.9 -4.85782 | gap 1, opp_overlap 225009 AAGCCTTATCCATAA GAAACA-AGCAA AAA TTGTTCTGTTTC TTTCTTTTTAACGCC TERM 208 226712 - 226695 - g 70 -4.3 -4.82154 | overlap 226702 AATCTATATTAAAAA TTAAAAA TTAT TTTTTAA ACAATTGGGAAAAAA RBE_0191 225353 - 226900 + | hypothetical protein TERM 209 227153 - 227181 + T 100 -12.1 -4.64763 | opp_overlap 227159 227162, overlap 227159 ATTGCGGGATCCAGT TAAAAATACTAAT AAA ATTAGTATTTTTA TTATTTTTTGGATGC TERM 210 227175 - 227159 - T 78 -6.7 -4.67353 | opp_overlap 227153 227159, overlap 227162 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTATTATTTTTT TERM 211 227159 - 227175 + T 90 -6.7 -5.54403 | opp_overlap 227159 227162, overlap 227153 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTATTATTTTTT RBE_0192 227725 - 227252 - | putative virulence protein TERM 212 227506 - 227533 + g 74 -7.9 -3.76888 | gap 1, opp_overlap 227523, overlap 227509 TTTCTCCTTCAATTT G-AACTGTTGCA AAAAA TGCAACAGTTGC TCTTTCTTCTAACTC TERM 213 227509 - 227529 + g 80 -9.8 -3.55988 | opp_overlap 227523, overlap 227506 CTCCTTCAATTTGAA CTGTTGCA AAAAA TGCAACAG TTGCTCTTTCTTCTA ligA 229801 - 227732 - | NAD-dependent DNA ligase LigA TERM 214 228213 - 228230 + g 71 -8.5 -2.88544 | TTCTGCTCGCCTATA TGCCTTA TACC TAAGGCA TATATAAACCTAGGC RBE_0194 230439 - 230221 - | hypothetical protein RBE_0195 231077 - 230658 - | hypothetical protein ccmF 233167 - 231110 - | cytochrome c-type biogenesis protein ccmF TERM 215 231962 - 231986 + g 82 -10 -3.29461 | overlap 231964 CTTATTGTTTATTGT CATCCCGTGG CTTGA CCACGGGATC TTATGCCACAGATTG TERM 216 231964 - 231984 + g 90 -12.6 -3.21395 | overlap 231962 TATTGTTTATTGTCA TCCCGTGG CTTGA CCACGGGA TCTTATGCCACAGAT TERM 217 232032 - 232012 - G 90 -12.6 -3.06162 | GATTGTATCCTAAGA TCCCGCGA TCGAG TCGCGGGA TGACACAATAACTCC TERM 218 232972 - 232993 + g 76 -8.7 -3.45885 | overlap 232971 232974 AGAAAGTAAGTATGT CATTCCCGC AAAA GCGGGAATC TAGTTTTTTAATTGT TERM 219 232974 - 232991 + g 88 -11.3 -3.27687 | overlap 232972 232971 AAAGTAAGTATGTCA TTCCCGC AAAA GCGGGAA TCTAGTTTTTTAATT RBE_0197 234434 - 233160 - | hemolysin-like protein RBE_0198 236693 - 234561 - | hypothetical protein TERM 220 235709 - 235727 + g 76 -5.2 -5.0133 | TTATAGGTTGTGGTT GAGGGGGT TGA GCTTCCTC TTTTTTACCAAGGTA lolD 237417 - 236752 - | lipoprotein releasing system ATP-binding protein LolD RBE_0200 238657 - 237410 - | lipoprotein releasing system, transmembrane protein TERM 221 238309 - 238331 + g 100 -10.8 -4.68593 | opp_overlap 238315 TTAAATCAATACCTT TAATAATAGC ACC GCTATTATTA TTTTTGCCTAGTGCC TERM 222 238758 - 238706 - R 76 -9.9 -2.60685 | opp_overlap 238714 238718 238752, overlap 238705 GAATTATAGAGTAAT TCGACGCGGCAATCTCAGGAAGC TTATACT ACTTCATGAGATTGCTTCGTCGC TACGCTCCTCGTAAT TERM 223 238714 - 238750 + r 78 -9.6 -3.18582 | opp_overlap 238706 238705, overlap 238718 GAGTAATTCGACGCG GCAATCTCAGGAAG CTTATACTA CTTCATGAGATTGC TTCGTCGCTACGCTC bcr2 239963 - 238788 - | MFS-type bicyclomycin resistance protein TERM 224 240070 - 240098 + r 100 -10.6 -4.73105 | opp_overlap 240077, overlap 240077 ACGAAGCAATCCAGT TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 225 240091 - 240077 - R 72 -4.3 -5.10497 | opp_overlap 240070 240077 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 226 240077 - 240091 + r 88 -4.3 -5.80727 | opp_overlap 240077, overlap 240070 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 227 240373 - 240338 - R 90 -7.1 -5.34632 | AAGAAAATATAAAAA TAGGTTTAGAGTA AATATAAAAA CACTCTAAACCTA CCTAAAATTTAACTT RBE_0202 240697 - 240413 - | hypothetical protein TERM 228 241055 - 241077 + H 72 -5 -4.72617 | opp_overlap 241058, overlap 241058 ACTAGAGCCAGTTAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 229 241074 - 241058 - H 78 -6.7 -4.67755 | opp_overlap 241058 241055 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 230 241058 - 241074 + H 76 -6.7 -4.42118 | opp_overlap 241058, overlap 241055 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 231 241185 - 241204 + H 75 -9.4 -3.01924 | opp_overlap 241176 241174 241185 AAGAGAGTGTTAATA CCCTATAT CATG ATATAGGG TATTAAGCGGGCATA TERM 232 241204 - 241185 - H 76 -9.4 -3.06087 | opp_overlap 241185, overlap 241176 241174 AAGAGAGTGTTAATA CCCTATAT CATG ATATAGGG TATTAAGCGGGCATA RBE_0203 241361 - 242317 + | transposase TERM 233 242378 - 242352 - T 81 -9.5 -3.68569 | gap 1 CGATCCACGCAACAA TGCC-TTCCCGC ATAG GCGGGAATGACA TATGAACCTTAATTA ksgA 243197 - 242391 - | dimethyladenosine transferase xth2 244251 - 243466 - | exodeoxyribonuclease III RBE_0206 244929 - 244312 - | hypothetical protein RBE_0207 245908 - 245135 - | hypothetical protein xseA 247249 - 245921 - | exodeoxyribonuclease VII large subunit TERM 234 246381 - 246397 + g 90 -8.1 -4.74801 | overlap 246379 TTAACTAGCTGTTTA GTATTAG TTA CTAATAC TTTTTCATAAGATTG TERM 235 248918 - 248901 - g 72 -3.5 -5.18726 | opp_overlap 248914 GTGCTATAACAAAAA CAATAAA TGTA CTTATTG AGCCGATAGTTTCTT TERM 236 249427 - 249409 - g 80 -9 -3.67141 | opp_overlap 249418, overlap 249418 ACAATTTTACGGAAA TGTCAATT ACC AATTGACA GATAATTGGTCTGTT ostA 247502 - 249640 + | organic solvent tolerance protein-like protein TERM 237 249825 - 249813 - g 76 -3.5 -5.32699 | opp_overlap 249813 TTAAATATGAAAAAA TTATT ACT AATAA TTACTGTTTTTTTTA RBE_0210 249804 - 250688 + | hypothetical protein TERM 238 250760 - 250788 + F 77 -5.5 -4.87665 | overlap 250763 CTTGGGAACTAGATC CAGTAAAAAATAC GGA GTATTTTTTATTA TTTTTCTGGATACCA TERM 239 250763 - 250785 + F 100 -9.4 -4.5448 | overlap 250760 GGGAACTAGATCCAG TAAAAAATAC GGA GTATTTTTTA TTATTTTTCTGGATA RBE_0211 250897 - 251166 + | hypothetical protein TERM 240 251737 - 251754 + G 71 -8.5 -2.79302 | overlap 251739 TACAAGCTTGGATTT GATAGCA TGGT TGCTATC TCTGCTGAGCATGGT engA 251314 - 252672 + | GTP-binding protein EngA TERM 241 252965 - 252923 - T 71 -6.7 -3.96148 | gap 2, opp_overlap 252895 252923 252921 GCGTGCCACTACAAA TTAGTATTACTATTTTGTAGC ATA GC-ACCAAATAGTA-TACTAA TATTTTACTTGCTCC RBE_0213 254000 - 253365 - | transposase RBE_0214 254322 - 253909 - | transposase TERM 242 254483 - 254502 + r 76 -9.4 -3.06087 | opp_overlap 254483, overlap 254475 254471 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 243 254502 - 254483 - R 75 -9.4 -3.01924 | opp_overlap 254475 254471 254483 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 244 254634 - 254604 - R 84 -8.6 -4.33785 | opp_overlap 254611, overlap 254611 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCAT TERM 245 254611 - 254627 + r 78 -6.7 -4.67755 | opp_overlap 254604 254611 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 246 254627 - 254611 - R 95 -6.7 -5.77677 | opp_overlap 254611, overlap 254604 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT RBE_0215 255585 - 254710 - | nucleotidyltransferase rne 258075 - 255994 - | ribonuclease E TERM 247 258286 - 258258 - H 78 -9.1 -3.37568 | opp_overlap 258257 258260, overlap 258255 258256 CATATATAAAAACTA CATTAGATATTTA TTT TATATATCTAATG CTATATAAGCTCATC TERM 248 259368 - 259392 + G 77 -4.3 -5.28942 | ATATTATATGTTATA TTGATCGGAAG TTG CTTAGGATCAA TTTTTATTTGCAATA RBE_0217 258483 - 259640 + | hypothetical protein TERM 249 259661 - 259645 - g 71 -3 -5.1417 | CTACAAAATGAAAAA CTCCTT AAATA AAAGAG ACATCTCAATATTAA TERM 250 260073 - 260063 - g 81 -3.2 -5.73672 | AAAGAAGGAAAAAAA GCCT TTA AAGC TTCTTACCTTTATAA proP4 259637 - 260911 + | proline/betaine transporter RBE_0219 261272 - 260898 - | hypothetical protein TERM 251 262412 - 262441 + G 100 -12.5 -4.23892 | opp_overlap 262412 AAGATAAAGAAAAAA TATTAACTATCTT AAAT AAGATAGTTAATA TTTTAGGTACTTCAC TERM 252 262441 - 262412 - g 100 -12.5 -5.7827 | opp_overlap 262412 AAGATAAAGAAAAAA TATTAACTATCTT AAAT AAGATAGTTAATA TTTTAGGTACTTCAC RBE_0220 261523 - 264003 + | ankyrin repeat-containing protein RBE_0221 264722 - 264024 - | hypothetical protein TERM 253 264981 - 265001 + G 71 -5.5 -4.58466 | opp_overlap 264983 AATAGTAAGGGTAGA GATTTGAGT TAT ACTAAAATC TTTTATAATTATGGC RBE_0222 264840 - 265781 + | hypothetical protein TERM 254 266302 - 266336 + T 84 -6.7 -5.31456 | opp_overlap 266304 266312, overlap 266305 266312 ATTGACGAAGCAATC CAGTAAAAAATGCTA ACTTA TAGCATTTTTTATTA TTTTTTCTGGATTGC TERM 255 266305 - 266333 + T 100 -10.6 -4.73105 | opp_overlap 266304 266312, overlap 266302 266312 GACGAAGCAATCCAG TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 256 266326 - 266312 - T 75 -4.3 -5.18357 | opp_overlap 266305 266302 266312, overlap 266304 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 257 266312 - 266326 + T 88 -4.3 -5.80727 | opp_overlap 266312 266304, overlap 266305 266302 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT rpsI 266979 - 266485 - | 30S ribosomal protein S9 rplM 267453 - 266986 - | 50S ribosomal protein L13 RBE_0225 268790 - 267546 - | WD-40 repeat-containing protein TERM 258 268832 - 268850 + r 78 -10.4 -2.84218 | overlap 268831 CTCTATCTAAGCCTG CAAGCAAA GCT TTTGCTTG ATCTTTTAGTAAATC RBE_0226 269477 - 268809 - | hypothetical protein RBE_0227 270235 - 269483 - | hypothetical protein barA 271839 - 270343 - | histidine kinase sensor protein TERM 259 272002 - 271966 - R 100 -14.9 -4.87665 | opp_overlap 271976, overlap 271976 CGGGATCCAGAAAAA CAATTAAAAATATCAAT ATC ATTGATATTTTTAACTG GACCCCGTGGTCAAG TERM 260 271992 - 271976 - R 83 -6.7 -5.10004 | opp_overlap 271976, overlap 271966 AAAAACAATTAAAAA TATCAAT ATC ATTGATA TTTTTAACTGGACCC TERM 261 271976 - 271992 + r 78 -6.7 -4.65895 | opp_overlap 271976 271966 AAAAACAATTAAAAA TATCAAT ATC ATTGATA TTTTTAACTGGACCC ctp 273412 - 272051 - | carboxyl-terminal protease TERM 262 273464 - 273519 + r 70 -8.4 -3.09635 | gap 1 GAGAAACTGTAAGTT TCGACGAAGCAATCTTAGGAGTCTTGT ACT ACT-GCCTTATGAGATTGCTTCGTCGC TTCGCTCCTCGCAAT parE 275533 - 273545 - | DNA topoisomerase IV subunit B RBE_0231 277541 - 275652 - | ankyrin repeat-containing protein RBE_0232 278605 - 277649 - | transposase TERM 263 278766 - 278785 + r 76 -9.4 -3.06087 | opp_overlap 278766, overlap 278758 278754 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 264 278785 - 278766 - R 75 -9.4 -3.01924 | opp_overlap 278766 278758 278754 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 265 278919 - 278889 - R 84 -8.6 -4.33785 | opp_overlap 278896, overlap 278896 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCAT TERM 266 278896 - 278912 + r 78 -6.7 -4.67755 | opp_overlap 278889 278896 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 267 278912 - 278896 - R 95 -6.7 -5.77677 | opp_overlap 278896, overlap 278889 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT RBE_0233 279381 - 278998 - | hypothetical protein TERM 268 279133 - 279157 + g 72 -3.7 -5.22289 | TTCTTCAAGAGCATT TTTAGATGAAA CAT TATTATCTAAA TTTTTATCTTTAATA tolC 280746 - 279382 - | Type I secretion outer membrane protein TolC RBE_0235 280959 - 282158 + | hypothetical protein RBE_0236 282151 - 282549 + | hypothetical protein tdk 282708 - 283328 + | thymidylate kinase TERM 269 284440 - 284422 - g 79 -7.4 -4.52873 | overlap 284425 TGTTTATAAAAATAA TGATGGCA AAG TGCCAGCA ATCACGCAAGATGCA metG 283325 - 284854 + | methionyl-tRNA synthetase tatD 285209 - 286072 + | putative deoxyribonuclease TatD RBE_0240 286152 - 286568 + | hypothetical protein RBE_0241 286580 - 287152 + | hypothetical protein TERM 270 287281 - 287248 - f 79 -5 -5.31456 | gap 1, opp_overlap 287248 287251 287258, overlap 287251 287258 GCAATCTAGAAAAAA TAATAAAAAATACTA TAATT TAGTATTTTTTA-TA CTTCCTTGCTTCGTC TERM 271 287279 - 287251 - f 100 -9.2 -4.73105 | opp_overlap 287251 287248 287258, overlap 287248 287258 ATCTAGAAAAAATAA TAAAAAATACTA TAATT TAGTATTTTTTA TACTTCCTTGCTTCG TERM 272 287251 - 287279 + F 74 -9.2 -2.87354 | opp_overlap 287248 287251 287258, overlap 287248 287258 ATCTAGAAAAAATAA TAAAAAATACTA TAATT TAGTATTTTTTA TACTTCCTTGCTTCG TERM 273 287258 - 287272 + F 72 -2.9 -5.38249 | opp_overlap 287258 287251 287248, overlap 287251 287248 AAAAATAATAAAAAA TACTA TAATT TAGTA TTTTTTATACTTCCT TERM 274 287272 - 287258 - f 81 -2.9 -5.80727 | opp_overlap 287251 287248 287258, overlap 287251 287248 AAAAATAATAAAAAA TACTA TAATT TAGTA TTTTTTATACTTCCT TERM 275 287686 - 287709 + F 83 -10.4 -3.2827 | opp_overlap 287689 CTTCTAACTCCCCAA CCACCATAAA ATAT TTTGTGGTGG TTAATACTTGAATAA RBE_0242 287752 - 288168 + | hypothetical protein RBE_0243 288696 - 288445 - | hypothetical protein RBE_0244 289509 - 288991 - | hypothetical protein RBE_0245 289804 - 289511 - | mannose-1-phosphate guanylyltransferase RBE_0246 290540 - 289839 - | mannose-1-phosphate guanylyltransferase mutM 291424 - 290603 - | formamidopyrimidine-DNA glycosidase TERM 276 292230 - 292250 + G 71 -6.9 -4.08216 | opp_overlap 292229 292225 CTGATATTAATAAAG CTCTAAAAG AAG CTTATAGAG TTTTAAAACCGATGG ubiE 291785 - 292531 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 277 292931 - 292899 - g 91 -10.6 -4.08216 | overlap 292876 292919 292922 TCATCCCCGTGAAAA CGGGGATCCAGAAA AAAAA TTACTGGATTCCCG CCTATGCGGGAATGA TERM 278 293158 - 293135 - g 71 -5.4 -4.56775 | ATTTCCTTGCAAAAA TTGCTTCAAA ATTT TCTAAAGCAA AAAGGCTGAAACCGA ubiB 292528 - 293994 + | 2-polyprenylphenol 6-hydroxylase RBE_0250 294060 - 295196 + | ATPase RBE_0251 295273 - 297063 + | hypothetical protein RBE_0252 297395 - 297180 - | putative transcriptional regulator TERM 279 297557 - 297535 - H 76 -9.4 -3.09193 | opp_overlap 297535, overlap 297538 ACTAGAGCCAGTTAA TAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 280 297535 - 297557 + H 100 -9.4 -4.72617 | opp_overlap 297535 297538 ACTAGAGCCAGTTAA TAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 281 297665 - 297684 + H 75 -9.4 -3.01924 | opp_overlap 297656 297654 297665 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 282 297684 - 297665 - H 76 -9.4 -3.06087 | opp_overlap 297665, overlap 297656 297654 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0253 297845 - 298801 + | transposase RBE_0254 298925 - 299482 + | putative esterase TERM 283 299792 - 299809 + G 81 -4.3 -5.45802 | opp_overlap 299792 299794 299799 TACAGGTTTGATATA TATATTA CCTT TAATATA TTTTTATTTTAAAGG coxW 299496 - 300506 + | cytochrome c oxidase assembly protein rluA1 300506 - 301411 + | ribosomal large subunit pseudouridine synthase TERM 284 302039 - 302049 + G 70 -4 -5.03145 | ATTTATGTAATTTTT TTCA AGA TGAA TTTTTTAGACCATTA TERM 285 302529 - 302519 - g 71 -5.4 -4.63928 | ATACTATGGTAAAAA TTCC TGA GGAA ATGCAAGATAAAATT pbpE 301441 - 302631 + | penicillin-binding protein 4* xth1 302632 - 303453 + | exodeoxyribonuclease III TERM 286 303483 - 303447 - f 100 -9.8 -5.09225 | opp_overlap 303457, overlap 303457 ACGGGATCCAAAAAA CAACTAAAAATATCAA TAATG TTGATATTTTTAACTG GACCCCGTGATCAAG TERM 287 303473 - 303457 - f 70 -3.8 -5.10004 | opp_overlap 303457, overlap 303447 AAAAACAACTAAAAA TATCAA TAATG TTGATA TTTTTAACTGGACCC pdhA 303565 - 304545 + | pyruvate dehydrogenase e1 component, alpha subunit precursor pdhB 304717 - 305694 + | pyruvate dehydrogenase subunit beta RBE_0261 306682 - 305687 - | ankyrin repeat-containing protein TERM 288 306772 - 306762 - H 72 -2.6 -5.42862 | overlap 306767 ATATCCTTAAAAAAA TAAA ATA TTTA CTATAAATAACACAT TERM 289 306781 - 306767 - H 82 -4.4 -5.55855 | overlap 306762 CTTAAAAAAATAAAA TATTTA CTA TAAATA ACACATAATTCAACT TERM 290 307728 - 307718 - g 74 -3.2 -5.4251 | GTGAGAGATAAAAAA GAAG TAG CTCC ATTTATATATACTAT cydB 306938 - 307957 + | cytochrome d ubiquinol oxidase subunit II RBE_0263 308304 - 309113 + | hypothetical protein TERM 291 309154 - 309114 - T 81 -10.1 -3.39569 | opp_overlap 309116, overlap 309106 309116 AATAATATACATTAA TATTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAATT ATTGTTCTAGATAAT TERM 292 309152 - 309116 - T 100 -12.7 -3.25307 | opp_overlap 309116, overlap 309114 309106 TAATATACATTAATA TTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAA TTATTGTTCTAGATA TERM 293 309116 - 309152 + T 100 -12.7 -4.03888 | opp_overlap 309114 309106 309116 TAATATACATTAATA TTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAA TTATTGTTCTAGATA RBE_0264 310340 - 309186 - | AAA+ superfamily protein TERM 294 310405 - 310363 - H 87 -11 -3.36452 | opp_overlap 310364, overlap 310364 310366 ATTTGCTAATATTAA TTATTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAATAT TTTTATATCTTAATC TERM 295 310404 - 310364 - H 100 -14.5 -2.6155 | opp_overlap 310364, overlap 310363 310366 TTTGCTAATATTAAT TATTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAATA TTTTTATATCTTAAT TERM 296 310364 - 310404 + H 100 -14.5 -5.10968 | opp_overlap 310364 310363 310366 TTTGCTAATATTAAT TATTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAATA TTTTTATATCTTAAT TERM 297 310402 - 310366 - H 100 -12.7 -2.84723 | opp_overlap 310364, overlap 310364 310363 TGCTAATATTAATTA TTGTACAAATTATAAAT CCA ATTTCTAATTTGTACAA TATTTTTATATCTTA TERM 298 310512 - 310467 - H 91 -8.9 -4.74012 | gap 1, opp_overlap 310469 310473 310475 310477, overlap 310469 ATGACAAAATCAAAA TATGAATATATTATTTAATTTT AAG ATAATTAAATAATATATTCA-A TGAGTGCAGATACTA TERM 299 310511 - 310469 - H 100 -14 -3.96876 | opp_overlap 310469 310473 310475 310477, overlap 310467 GACAAAATCAAAATA TGAATATATTATTTAATTTT AAG ATAATTAAATAATATATTCA ATGAGTGCAGATACT TERM 300 310473 - 310507 + H 73 -9 -3.07816 | opp_overlap 310469 310467, overlap 310469 310475 310477 AAATCAAAATATGAA TATATTATTTAATTTT AAG ATAATTAAATAATATA TTCAATGAGTGCAGA tolQ 310512 - 311237 + | hypothetical protein tolR 311237 - 311668 + | hypothetical protein RBE_0267 311658 - 312629 + | periplasmic protein TonB tolB 312806 - 314140 + | translocation protein TolB RBE_0269 314241 - 315239 + | phospholipase/lecithinase/hemolysin TERM 301 315300 - 315287 - f 79 -5.3 -5.27477 | ATTGGAATTAAAAAA TCAGA TACC TCTGA AATCGCTGCAAATTT sca16 315377 - 315937 + | Outer memberane protein Sca16 TERM 302 316206 - 316184 - f 76 -9.4 -3.09193 | opp_overlap 316184, overlap 316187 ACTAGAGCCAGTTAA TAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 303 316184 - 316206 + F 100 -9.4 -4.72617 | opp_overlap 316184 316187 ACTAGAGCCAGTTAA TAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 304 316333 - 316314 - f 76 -9.4 -3.06087 | opp_overlap 316314, overlap 316305 316303 AAGAGAGTGTTAATA CCCTATAT CATG ATATAGGG TATTAAGCGGGCATA TERM 305 316314 - 316333 + F 75 -9.4 -3.01924 | opp_overlap 316305 316303 316314 AAGAGAGTGTTAATA CCCTATAT CATG ATATAGGG TATTAAGCGGGCATA RBE_0271 316490 - 317314 + | transposase RBE_0272 317281 - 317445 + | transposase RBE_0273 318152 - 317520 - | hypothetical protein RBE_0274 319552 - 318446 - | hypothetical protein TERM 306 318498 - 318510 + g 75 -4.9 -5.04249 | opp_overlap 318489 AATAAAGTAAAGCCT GTAAA GAT TTTAC TTTCTTTTTTACCAG thyX 320538 - 319654 - | FAD-dependent thymidylate synthase RBE_0276 321486 - 320797 - | putative metal-dependent hydrolase nlpD1 322264 - 321488 - | membrane-bound metallopeptidase TERM 307 321903 - 321924 + g 80 -9.5 -3.52207 | gap 1, overlap 321884 TCAGTAGTTTCTATT GCAGGCTCTT CTA AAGAGCC-GC TTACTTCTAATTTAG lacA 322355 - 322789 + | ribose-5-phosphate isomerase B RBE_0279 322948 - 323703 + | hypothetical protein RBE_0280 323681 - 323827 + | hypothetical protein RBE_0281 323834 - 324514 + | ABC transporter transmembrane region abcT4 324834 - 325604 + | ABC-type multidrug transport system, ATPase component TERM 308 325899 - 325929 + F 84 -8.6 -4.33785 | opp_overlap 325906, overlap 325906 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 309 325906 - 325922 + F 95 -6.7 -5.77677 | opp_overlap 325906, overlap 325899 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 310 325922 - 325906 - f 78 -6.7 -4.67755 | opp_overlap 325906 325899 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 311 326052 - 326033 - f 76 -9.4 -3.06087 | opp_overlap 326033, overlap 326024 326022 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCGTA TERM 312 326033 - 326052 + F 75 -9.4 -3.01924 | opp_overlap 326033 326024 326022 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCGTA RBE_0283 326213 - 327019 + | transposase RBE_0284 327006 - 327170 + | transposase RBE_0285 327859 - 327260 - | GTP-binding protein TypA RBE_0286 329095 - 327863 - | GTP-binding protein TypA RBE_0287 329230 - 329961 + | hypothetical protein TERM 313 330053 - 330105 + F 100 -12.9 -2.56273 | opp_overlap 330052 330094, overlap 330098 GAGAAACTGTAAATT TCGACGTGGCAATCTCAGGAGGT TTATATT GTTTTATGAGATTGCCGCGTCGA TGCGTTGCATCTCCT hlpA 330155 - 330709 + | Outer membrane protein icd 330721 - 332172 + | isocitrate dehydrogenase RBE_0290 332300 - 333055 + | hypothetical protein RBE_0291 333000 - 333422 + | hypothetical protein recO 333419 - 334144 + | DNA repair protein RecO TERM 314 334246 - 334218 - T 72 -6.3 -4.33182 | GCATCCAGAAAATAA TAAAAATATAAAT ATT ATTGATATTTTTA ACTGGATCCCATCAA RBE_0293 334903 - 334343 - | hypothetical protein TERM 315 334560 - 334607 + g 100 -8.6 -5.65177 | overlap 334562 334563 AATTTTTCTTGTGCT TTTTCTGCTTGATCAGTTACAA ACTT TTGTAACTTACCAAGCGGAGTA TTTTTTTCTAAATGT TERM 316 334562 - 334605 + g 100 -11.2 -4.46105 | overlap 334560 334563 TTTTTCTTGTGCTTT TTCTGCTTGATCAGTTACAA ACTT TTGTAACTTACCAAGCGGAG TATTTTTTTCTAAAT TERM 317 334563 - 334604 + g 90 -12.5 -3.26036 | overlap 334562 334560 TTTTCTTGTGCTTTT TCTGCTTGATCAGTTACAA ACTT TTGTAACTTACCAAGCGGA GTATTTTTTTCTAAA RBE_0294 336296 - 335004 - | putative methyltransferase TERM 318 335803 - 335820 + g 72 -3.5 -5.15634 | overlap 335805 ATACCACCTTTTGGC TTTAAAG AATC CTTTAGA TTTTTTAATCCCATA TERM 319 336263 - 336277 + g 76 -3.6 -5.47399 | CTTTTGAAATTTTTG TAGAAG CAT CTTTTA TTTTTTTAAAATTGC recJ 338065 - 336308 - | single-stranded-DNA-specific exonuclease RecJ TERM 320 337210 - 337191 - G 75 -5 -5.10933 | GGACCTAAAATAAAA CCTAAATG ATAG CATTTTGG GATTTCATTAAGCCC TERM 321 337462 - 337446 - G 74 -2.2 -5.63517 | GTTGCAAATAAAAAA GCAACC CCTAC AGCTGC AAGATGTTTACATTC RBE_0296 338389 - 338102 - | hypothetical protein RBE_0297 339147 - 338473 - | hypothetical protein TERM 322 338538 - 338562 + g 71 -8.8 -2.83323 | overlap 338537 338557 AGCTTTCCTCTTCCA TGTCTAAATA ATTTA TATTTAGACA ATTATCATTTTCTAT TERM 323 338557 - 338576 + g 86 -2.2 -6.47325 | overlap 338538 338537 TAAATAATTTATATT TAGACAAT TATC ATTTTCTA TTTTTTTTATTTTTT prfA 340230 - 339157 - | peptide chain release factor 1 RBE_0299 340395 - 340273 - | hypothetical protein pdhC 341662 - 340406 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 324 341719 - 341739 + r 80 -9.8 -3.32202 | overlap 341717 GCGTAGTATTTGTCA TACCGCAA CTTGA TTGCGGTA TCTTGTATCACAATC infC 342250 - 341807 - | translation initiation factor IF-3 RBE_0302 342775 - 342428 - | hypothetical protein TERM 325 342672 - 342686 + g 77 -4.4 -5.14985 | opp_overlap 342672, overlap 342679 AATATATGCTCAAAT TTTTTA CGA TAAAAA TTTTTATCTATTTCA RBE_0303 343720 - 342935 - | hypothetical protein RBE_0304 344310 - 343717 - | hypothetical protein RBE_0305 344958 - 344560 - | nucleotidyltransferase substrate binding protein TERM 326 345022 - 345047 + r 100 -9.3 -4.88795 | opp_overlap 345028, overlap 345028 TCCACGGGGTCCAGC TAAAAATACTA ATAT TAGTATTTTTA TTTATTTTATTAGAT TERM 327 345028 - 345041 + r 81 -3.9 -5.59962 | opp_overlap 345028, overlap 345022 GGGTCCAGCTAAAAA TACTA ATAT TAGTA TTTTTATTTATTTTA TERM 328 345082 - 345062 - R 85 -11.2 -2.79915 | opp_overlap 345050, overlap 345074 ATTTATTTTATTAGA TGCCGTGA TCAAG TCACGGCA TGACATAAAGGACTT RBE_0306 345480 - 345070 - | hypothetical protein RBE_0307 345805 - 345470 - | hypothetical protein RBE_0308 346239 - 345817 - | hypothetical protein RBE_0309 347867 - 346410 - | Phage prohead protease and phage major capsid protein RBE_0310 348067 - 348579 + | hypothetical protein TERM 329 348628 - 348658 + F 84 -8.6 -4.33182 | opp_overlap 348635, overlap 348635 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 330 348651 - 348635 - f 78 -6.7 -4.67353 | opp_overlap 348628 348635 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 331 348635 - 348651 + F 95 -6.7 -5.77677 | opp_overlap 348635, overlap 348628 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 332 349553 - 349543 - g 74 -4 -5.2015 | overlap 349535 349546 CCAATAATAGAAAAA TTAG TTT CTAA AACTCCTGAAATAGA TERM 333 349751 - 349773 + G 77 -9.2 -3.19026 | TTTTTGGCTGTCCTG CTCATGATCA ACG TGACCATGAG TTAGCTGTTAAAATA leuS 348754 - 351249 + | leucyl-tRNA synthetase TERM 334 351271 - 351301 + F 100 -12.7 -3.27951 | overlap 351269 TCATCACGCAACTCC TGTCATCCCGTAA CTTGA TCACGGGATGACA TCTTATAATAACCTA ntrX 351451 - 352887 + | nitrogen assimilation regulatory protein NtrX TERM 335 354339 - 354351 + G 75 -4.9 -4.93898 | opp_overlap 354332 354339 TAAGTAATTTAATAT TTAAC GCA GTTAA TTTTTCTGGTGCTAT RBE_0313 352868 - 354628 + | hypothetical protein TERM 336 354669 - 354648 - T 71 -8.9 -2.76573 | opp_overlap 354652, overlap 354647 ATGAAGAATTAGAAT TTTACCTAT ACAA ATAGGTAAA TTAAAATTGTATCTT TERM 337 354739 - 354769 + T 74 -6.4 -4.4831 | opp_overlap 354746, overlap 354736 354746 ATGAACTAGAGCCAG TTAGAAATACTAAT AAA ATAAGTATTTTTAA TTATTTTTCCTGGAT RBE_0314 355666 - 354884 - | hypothetical protein RBE_0315 356532 - 355651 - | hypothetical protein radA 358018 - 356672 - | DNA repair protein RadA TERM 338 358093 - 358126 + r 93 -11.3 -3.4684 | opp_overlap 358088 358097 ATTTATAAACGCTAG TATAGGATAAGATTT TAAA AAACCTTATCCTATA TTCATTCGTATTATA TERM 339 358122 - 358097 - R 76 -9.9 -2.82234 | opp_overlap 358093, overlap 358088 ATAAACGCTAGTATA GGATAAGATTT TAAA AAACCTTATCC TATATTCATTCGTAT RBE_0317 358991 - 358170 - | ankyrin repeat-containing protein TERM 340 358235 - 358267 + g 70 -6.4 -4.31688 | opp_overlap 358245 TTTCTGCTTCTGATG CTCCTAAAATTGAT ACTCC ATCATTTATAGGAG TTTTAGCTTCATCTT RBE_0318 360009 - 358999 - | hypothetical protein RBE_0319 362582 - 360423 - | ankyrin repeat-containing protein RBE_0320 363470 - 362892 - | N6-adenine-specific methylase rluA2 364153 - 363464 - | ribosomal large subunit pseudouridine synthase rlpA 364885 - 364202 - | rare lipoprotein A precursor osmY 365483 - 364872 - | putative periplasmic or secreted lipoprotein ispZ 366075 - 365533 - | intracellular septation protein A TERM 341 365600 - 365622 + g 73 -7.7 -3.66178 | opp_overlap 365600 AAAATGAATACAAAA GTAATCGGC ACTAC GCCGAATAC TTTAAACTTAACCCA TERM 342 365622 - 365600 - G 90 -8.4 -4.77629 | opp_overlap 365600 AAAATGAATACAAAA GTAATCGGCA CTA CGCCGAATAC TTTAAACTTAACCCA RBE_0325 366946 - 366089 - | FTR1 family protein RBE_0326 367338 - 366955 - | hypothetical protein RBE_0327 368551 - 367565 - | hypothetical protein TERM 343 368828 - 368798 - H 84 -8.6 -4.33182 | opp_overlap 368805, overlap 368805 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGGTC TERM 344 368821 - 368805 - H 95 -6.7 -5.77677 | opp_overlap 368805, overlap 368798 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 345 368805 - 368821 + H 78 -6.7 -4.67353 | opp_overlap 368805 368798 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 346 368889 - 368901 + H 78 -9.1 -3.28712 | opp_overlap 368889 CGATCCACGCACCAA TGCCG CCA CGGCA TTGTAAGAAAAGAAA TERM 347 368901 - 368889 - H 76 -9.1 -3.18912 | opp_overlap 368889 CGATCCACGCACCAA TGCCG CCA CGGCA TTGTAAGAAAAGAAA TERM 348 368972 - 368991 + H 75 -9.4 -3.01924 | opp_overlap 368972 368963 368961 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 349 368991 - 368972 - H 76 -9.4 -3.06087 | opp_overlap 368972, overlap 368963 368961 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0328 369152 - 369865 + | transposase RBE_0329 369897 - 370523 + | protocatechuate-3,4-dioxygenase, beta subunit tlpA 370933 - 371523 + | Thiol:disulfide interchange protein tlpA sppA1 371612 - 372526 + | Signal peptide peptidase SppA, 36K type TERM 350 372942 - 372922 - g 79 -8.3 -3.96542 | GGAAAGAAAGCGAAA CTCTTGAAG AGA CTGCAAGAG GTAGTGGCGGCTTCG dut 372528 - 372980 + | deoxyuridine 5'-triphosphate nucleotidohydrolase RBE_0333 373118 - 373813 + | putative glycoprotein endopeptidase RBE_0334 374276 - 373836 - | hypothetical protein RBE_0335 374507 - 376057 + | hypothetical protein gabD 376128 - 377519 + | succinate semialdehyde dehydrogenase RBE_0337 377895 - 378233 + | hypothetical protein TERM 351 378361 - 378351 - g 72 -2.6 -5.4833 | opp_overlap 378351 TGATTTAATAAAAAA TAAA GAC TTTA TGTTACCGGAAAATC TERM 352 378452 - 378441 - g 70 -4.4 -4.81863 | overlap 378443 AAACTTAGAAGAAAA GACA AAAT TGTC AATTGGTTATTTGCC RBE_0338 378280 - 378666 + | hypothetical protein TERM 353 379966 - 379955 - g 74 -3 -5.49809 | opp_overlap 379955 TAAATGCTAAAAAAA TTTC ATCT GAAA TTTATACAGATCAAA RBE_0339 378745 - 380076 + | hypothetical protein TERM 354 380187 - 380217 + F 84 -8.6 -4.33785 | opp_overlap 380194, overlap 380191 380194 CTAACTAGGTCCAGC TAAAAAATACTAAT AAA ATTAGTATTATTTA TTATTTTCTGGATCT TERM 355 380191 - 380213 + F 72 -5 -4.72617 | opp_overlap 380194, overlap 380187 380194 CTAGGTCCAGCTAAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 356 380194 - 380210 + F 76 -6.7 -4.42118 | opp_overlap 380194, overlap 380191 380187 GGTCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 357 380210 - 380194 - f 83 -6.7 -5.08824 | opp_overlap 380194 380191 380187 GGTCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 358 380321 - 380340 + F 75 -9.4 -3.01924 | opp_overlap 380312 380310 380321 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 359 380340 - 380321 - f 76 -9.4 -3.06087 | opp_overlap 380321, overlap 380312 380310 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0340 380501 - 381307 + | transposase RBE_0341 381294 - 381458 + | transposase TERM 360 381907 - 381921 + G 70 -4.2 -5.1101 | overlap 381909 TGCCTATTTCCTTGC TCCTCG TTT CGAGCA TTTTTTAGGTAGTAG putP 381629 - 384379 + | Na+/proline symporter and signal transduction histidine kinase TERM 361 384445 - 384416 - f 85 -5.9 -5.47218 | CGGTATCCAAAAAAA CAATAAAAAATAC TAAC GTATTTTTAACTG GCTCTAGTTCCCAAG RBE_0343 384538 - 385713 + | hypothetical protein TERM 362 385741 - 385729 - g 79 -3.5 -5.69023 | AAAACATGAAAAAAA TTATT TTT AATAA ACAACAAGATTTTAT TERM 363 385867 - 385886 + G 76 -3.6 -5.5112 | opp_overlap 385867 TAGATGATAAGATAT TGGTAG GGGATGAG CTACCA TTTTTTGTTGCTCCA mccF2 385719 - 386615 + | microcin C7 resistance protein TERM 364 386839 - 386809 - T 84 -8.6 -4.33785 | opp_overlap 386816, overlap 386816 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCATGAAT TERM 365 386816 - 386832 + T 78 -6.7 -4.67353 | opp_overlap 386809 386816 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 366 386832 - 386816 - T 95 -6.7 -5.77677 | opp_overlap 386816, overlap 386809 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 367 387016 - 387045 + T 100 -9.5 -5.43866 | opp_overlap 387019, overlap 387019 TTTTTAAATTATAGA TAAGTTGCAAATT TAAC AATTTGCAACTTC TTTTTTTAAAACTTA TERM 368 387019 - 387042 + T 100 -11.2 -4.79949 | opp_overlap 387019, overlap 387016 TTAAATTATAGATAA GTTGCAAATT TAAC AATTTGCAAC TTCTTTTTTTAAAAC TERM 369 387042 - 387019 - T 93 -11.2 -3.66787 | opp_overlap 387016 387019 TTAAATTATAGATAA GTTGCAAATT TAAC AATTTGCAAC TTCTTTTTTTAAAAC RBE_0345 389387 - 387072 - | hypothetical protein TERM 370 388929 - 388953 + g 89 -8.7 -4.64361 | GTCTTTTTTATGACC CAACGATGAAG TAG CTTTATTGTTG TTTTGCTGTTTTTTG TERM 371 389626 - 389568 - H 100 -19.4 -2.70936 | opp_overlap 389568 389573 389588, overlap 389573 TTATGAATTACACTA TGACACTGTTAACAAAATCTCTTTGATT ATC AATTAAAGCTATTTTGTTAACAGTGTCA TAGTGTAGATAAGAA TERM 372 389568 - 389626 + H 100 -21.6 -2.64616 | opp_overlap 389568 389573, overlap 389573 389588 TTATGAATTACACTA TGACACTGTTAACAAAATCTCTTTGATT ATC AATTAAAGCTATTTTGTTAACAGTGTCA TAGTGTAGATAAGAA TERM 373 389621 - 389573 - H 89 -12.1 -2.85378 | opp_overlap 389568 389573 389588, overlap 389568 AATTACACTATGACA CTGTTAACAAAATCTCTTTGATT ATC AATTAAAGCTATTTTGTTAACAG TGTCATAGTGTAGAT TERM 374 389573 - 389621 + H 100 -14.3 -2.84812 | opp_overlap 389573 389568, overlap 389568 389588 AATTACACTATGACA CTGTTAACAAAATCTCTTTGATT ATC AATTAAAGCTATTTTGTTAACAG TGTCATAGTGTAGAT hemC 390194 - 391096 + | porphobilinogen deaminase TERM 375 391333 - 391303 - T 84 -8.6 -4.33785 | opp_overlap 391310, overlap 391310 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCAT TERM 376 391310 - 391326 + T 78 -6.7 -4.67755 | opp_overlap 391303 391310 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 377 391326 - 391310 - T 95 -6.7 -5.77677 | opp_overlap 391310, overlap 391303 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT RBE_0347 392505 - 391501 - | ankyrin repeat-containing protein TERM 378 392641 - 392661 + H 76 -9.9 -2.80545 | opp_overlap 392641, overlap 392640 392653 GGAGTTAAGTATAAA TTTTAACTG AAG CAGTTAAAA CTGTTTTGGGGTGTC TERM 379 392661 - 392641 - H 91 -9.9 -4.06904 | opp_overlap 392641 392640 392653 GGAGTTAAGTATAAA TTTTAACTG AAG CAGTTAAAA CTGTTTTGGGGTGTC TERM 380 392753 - 392714 - H 71 -7.2 -3.79747 | gap 1, opp_overlap 392712 392710, overlap 392717 392719 GTATCTACCATTAAA TGATACCACCCTCGACTAT ATT ATGGTCG-GGGTGGTAATA GGTATGTCTAGAGCT TERM 381 392750 - 392717 - H 100 -13.3 -2.98493 | gap 1, opp_overlap 392712 392710, overlap 392714 392719 TCTACCATTAAATGA TACCACCCTCGACTAT ATT ATGGTCG-GGGTGGTA ATAGGTATGTCTAGA TERM 382 392748 - 392719 - H 87 -11.5 -3.04415 | gap 1, opp_overlap 392712 392710, overlap 392717 392714 TACCATTAAATGATA CCACCCTCGACTAT ATT ATGGTCG-GGGTGG TAATAGGTATGTCTA RBE_0348 392889 - 393200 + | hypothetical protein TERM 383 393414 - 393389 - T 95 -12.1 -3.3482 | opp_overlap 393391 393396, overlap 393396 TAATTGTCTAATCAA TAGCAAATTAC AAAA GTAATTTGCTA TTAGGCGGTAATAAC TERM 384 393391 - 393412 + T 79 -10.3 -3.03441 | opp_overlap 393389 393396, overlap 393396 ATTGTCTAATCAATA GCAAATTAC AAAA GTAATTTGC TATTAGGCGGTAATA aspS 395247 - 393439 - | aspartyl-tRNA synthetase RBE_0350 396262 - 395474 - | chromosome partitioning protein-like protein TERM 385 396191 - 396220 + g 80 -6.4 -4.89009 | opp_overlap 396190 396189 396193 396197, overlap 396193 TGCCACTATTAAATG GATAGAGCAGGT TGTTTT ACCTGCTCCACC TTTTTCATTACCTAT TERM 386 396218 - 396193 - G 74 -9.8 -2.68775 | opp_overlap 396191 396193, overlap 396190 396189 396197 CCACTATTAAATGGA TAGAGCAGGT TGTTTT ACCTGCTCCA CCTTTTTCATTACCT pepA 397760 - 396252 - | leucyl aminopeptidase RBE_0352 397921 - 398994 + | hypothetical protein TERM 387 399080 - 399119 + T 100 -10.4 -5.16572 | opp_overlap 399090 399093 TTTATTCACGAGGTC CAGTTAAAAATATCAATA ATAT TGTTGATATTTTTAGTTG TTTTTTAGATTCCGT TERM 388 399219 - 399235 + T 83 -6.7 -5.09895 | AAAACAACTTTTTTA TACTAAT AAT ATTAGTA TTTTTTAGCTGGATC RBE_0353 399761 - 399330 - | cell surface antigen Sca8 RBE_0354 399919 - 399758 - | cell surface antigen Sca8 RBE_0355 401929 - 399920 - | cell surface antigen Sca8 RBE_0356 402222 - 401977 - | hypothetical protein TERM 389 402333 - 402347 + r 76 -8.6 -3.53012 | opp_overlap 402332 AAGATAAAATATAGT GCGATT TAG AATCGC TTTGGACGAGAAAAA TERM 390 402937 - 402965 + r 81 -8.4 -4.34789 | opp_overlap 402944, overlap 402944 AGAGGCAATCTAGTT TAAAAAATGCTA ACTTA TAGCATTTTTTG TTATTTTCTGGATTG TERM 391 402958 - 402944 - R 72 -4.3 -5.05782 | opp_overlap 402937 402944 ATCTAGTTTAAAAAA TGCTA ACTTA TAGCA TTTTTTGTTATTTTC TERM 392 402944 - 402958 + r 88 -4.3 -5.77677 | opp_overlap 402944, overlap 402937 ATCTAGTTTAAAAAA TGCTA ACTTA TAGCA TTTTTTGTTATTTTC RBE_0357 403596 - 403303 - | ankyrin repeat-containing protein RBE_0358 406160 - 403731 - | ATP-dependent helicase surf1 406982 - 406257 - | Surfeit locus protein 1 TERM 393 406882 - 406899 + g 70 -4.1 -5.07652 | overlap 406885 AGATTTTCTTGCATC GATGCTA AAAA TAGCTTC TTTTCTTTTAAGCGA RBE_0360 408163 - 406985 - | hypothetical protein TERM 394 407151 - 407128 - G 77 -8.4 -3.81574 | opp_overlap 407131 407134, overlap 407131 407134 407145 TAATAAACAAAGTAA TAATAACATT TATA AATGTTATTA CATAACCTACCTTAT RBE_0361 408590 - 408168 - | hypothetical protein TERM 395 408609 - 408649 + r 87 -10.7 -3.25823 | opp_overlap 408620, overlap 408613 ATTATTTTATTTACA GAGGTTATAAAGGGATATT ACT GATATCCCTTTACAATTTC TTAATCTAAACAACC TERM 396 408613 - 408645 + r 91 -10.1 -4.29106 | opp_overlap 408620, overlap 408609 TTTTATTTACAGAGG TTATAAAGGGATATT ACT GATATCCCTTTACAA TTTCTTAATCTAAAC TERM 397 408638 - 408620 - R 74 -7.5 -3.91858 | opp_overlap 408613 408609 TACAGAGGTTATAAA GGGATAT TACTG ATATCCC TTTACAATTTCTTAA TERM 398 408766 - 408742 - R 71 -8.7 -2.77332 | overlap 408741 408739 408744 ATTTAAATTAAATAC CAGTTATCAAC TAA GCTAATAACTG TACCAATATATATAG dnaQ 409600 - 408911 - | DNA polymerase III subunit epsilon coaE 410163 - 409588 - | dephospho-CoA kinase TERM 399 409665 - 409685 + g 78 -7 -4.371 | CAACGCCGCTATTTA TAGCAAAA TCTGC TTTTGCTA TTTTACTCTCCTGCG RBE_0364 410969 - 410157 - | hypothetical protein RBE_0365 411707 - 412216 + | hypothetical protein rnhA 412221 - 412688 + | ribonuclease H RBE_0367 412676 - 412975 + | hypothetical protein RBE_0368 413000 - 413449 + | ABC transporter substrate binding protein RBE_0369 414355 - 413432 - | excinuclease ABC subunit C TERM 400 414616 - 414602 - g 70 -4.3 -4.84529 | TTATAAATGGAAAAA CGATA TTGAT TATCG TAAAGAGGCTGAAAA RBE_0370 414549 - 415028 + | hypothetical protein RBE_0371 415138 - 415422 + | hypothetical protein RBE_0372 415592 - 415885 + | hypothetical protein TERM 401 415926 - 415891 - T 100 -15.2 -4.6971 | opp_overlap 415894 415899 TAAATGGTAATAAAA TAAGATAATAGTAATT TAAA AATTACTATTATCTTA TGGGTAAAATTATGA TERM 402 415894 - 415923 + T 100 -12.5 -3.36803 | opp_overlap 415891, overlap 415899 ATGGTAATAAAATAA GATAATAGTAATT TAAA AATTACTATTATC TTATGGGTAAAATTA RBE_0373 417133 - 415958 - | hypothetical protein TERM 403 417524 - 417534 + H 70 -5.4 -4.56978 | overlap 417526 AAACTAAATTACTTA CTGA AAC TCAG TTTCTTGTTTAAAAA TERM 404 419505 - 419487 - H 75 -7.4 -4.09519 | overlap 419484 419488 AGTAGCGATAAAGAA TGCGAGAA ACA TTCTCGCC GAAAGTCCAAGGGTT TERM 405 419504 - 419488 - H 83 -10.9 -3.04988 | overlap 419484 419487 GTAGCGATAAAGAAT GCGAGAA ACA TTCTCGC CGAAAGTCCAAGGGT TERM 406 419838 - 419813 - H 90 -11.9 -2.94561 | overlap 419808 419810 TCGGAAGAAAGATGA CCCACATATGG GCAA CCATTTGTGGG TGGCACAAGCTAGGG RBE_0374 421699 - 421995 + | hypothetical protein RBE_0375 421973 - 422311 + | hypothetical protein TERM 407 422872 - 422889 + G 86 -4.1 -5.83211 | TAAGAACGGTTGAGC TACCAAG TAAG CTAGGTA TTTTTTCTTTTCCTA RBE_0376 422694 - 423023 + | hypothetical protein RBE_0377 423556 - 423020 - | hypothetical protein RBE_0378 423944 - 423645 - | transposase TERM 408 424178 - 424145 - H 83 -10.5 -3.28745 | opp_overlap 424149, overlap 424140 TGTTCAAGAATGCAA GTACTATTCGGAATA ATTT TTTTCCAAATAGTAC TAATAGGTCCTTTGG RBE_0379 424382 - 424714 + | streptomycin 6-kinase TERM 409 425491 - 425476 - g 74 -4 -5.20781 | TACGATAAAAGAAAA GATCCA ATTA TGAATC TTATGTATGATTTCA RBE_0380 425170 - 426027 + | putative transcriptional regulator TERM 410 426586 - 426596 + G 74 -4 -5.25772 | opp_overlap 426586 CGCCTATATCAATAT CAAA ATA TTTG TTTTTATTGTCCTTT mdlB 426173 - 427858 + | ABC-type multidrug transport system, ATPase and permease components RBE_0382 428782 - 427913 - | hypothetical protein TERM 411 429056 - 429030 - H 78 -9.6 -3.11103 | opp_overlap 429028 429027 429030, overlap 429021 429019 429041 429044 AAAATATGGACTTAA TTCCTAAAAAGT GAT ACTATTTAGGAA TGTATTCCTAAATAG TERM 412 429030 - 429056 + H 78 -9.6 -3.13867 | opp_overlap 429030 429021 429019 429041 429044, overlap 429028 429027 AAAATATGGACTTAA TTCCTAAAAAGT GAT ACTATTTAGGAA TGTATTCCTAAATAG TERM 413 429073 - 429044 - H 100 -13.9 -2.84171 | opp_overlap 429030 429028 429027, overlap 429030 429021 429019 429041 429061 ATTCCTAAAAAGTGA TACTATTTAGGAA TGTA TTCCTAAATAGTA AGGAAAAATGTATAA RBE_0383 429081 - 430259 + | AAA+ superfamily protein sca14 431513 - 430413 - | Outer memberane protein Sca14 RBE_0385 431853 - 431611 - | hypothetical protein TERM 414 431923 - 431905 - H 88 -9 -4.43037 | TTAACAAAAATTAAA TTACCATA TTT TATGGTAA TAGTCAACTAGAAAT TERM 415 432051 - 432035 - g 70 -4.4 -4.84359 | TCAGGTGGAGAAAAA GCTAGA TTAAG CCTAGC TAAAATTGCAGCTAG RBE_0386 431963 - 432232 + | ABC transporter ATP-binding protein RBE_0387 432236 - 433837 + | ABC transporter ATP-binding protein TERM 416 435101 - 435125 + G 70 -7.3 -3.68761 | overlap 435102 435104 TAGAGACGGCTAACT CTATCAAAGAA ATA TTCTTTGATAA TTATGGTTTTGAGCT TERM 417 435102 - 435124 + G 83 -10.8 -2.80533 | overlap 435101 435104 AGAGACGGCTAACTC TATCAAAGAA ATA TTCTTTGATA ATTATGGTTTTGAGC TERM 418 435104 - 435122 + G 73 -9 -2.94331 | overlap 435102 435101 AGACGGCTAACTCTA TCAAAGAA ATA TTCTTTGA TAATTATGGTTTTGA mutS 433915 - 436581 + | DNA mismatch repair protein RBE_0389 436649 - 437632 + | hypothetical protein mpg 438638 - 437976 - | 3-methyladenine DNA glycosylase RBE_0391 438862 - 438641 - | hypothetical protein nuoE 439358 - 438855 - | NADH dehydrogenase subunit E RBE_0393 439798 - 439526 - | excinuclease ABC subunit C nuoD 441068 - 439881 - | NADH dehydrogenase subunit D RBE_0395 441652 - 441236 - | hypothetical protein nuoC 442239 - 441649 - | NADH dehydrogenase subunit C nuoB 442741 - 442217 - | NADH dehydrogenase subunit B TERM 419 442840 - 442805 - R 82 -8 -4.42653 | gap 1, opp_overlap 442815, overlap 442815 ACGGGATCCAGAAAA CAATAAAAAATACTAAT ATT ATTAGTAT-TTTTACTG GACCCCGTGAACAAG TERM 420 442815 - 442831 + r 80 -6.7 -4.72272 | opp_overlap 442815 442805 GAAAACAATAAAAAA TACTAAT ATT ATTAGTA TTTTTACTGGACCCC TERM 421 442831 - 442815 - R 95 -6.7 -5.77677 | opp_overlap 442815, overlap 442805 GAAAACAATAAAAAA TACTAAT ATT ATTAGTA TTTTTACTGGACCCC TERM 422 442867 - 442855 - R 72 -7.7 -3.62046 | GGACCCCGTGAACAA GTCAC GGG GTGAC AAGGGGAAATGATCC nuoA 443295 - 442921 - | NADH dehydrogenase subunit A rfaL 444668 - 443442 - | putative lipid A core - O-antigen ligase RBE_0400 445151 - 444675 - | hypothetical protein TERM 423 445238 - 445258 + H 100 -12.6 -3.08798 | opp_overlap 445231 TGTAACAATGTGTCA TCCCGTGG CTTGA CCACGGGA TCTTGCATCACCAGT TERM 424 445306 - 445286 - H 100 -12.6 -3.05963 | opp_overlap 445283 AGTTGTATCCTAAGA TCCCGCAG TCAAG CTGCGGGA CGACATTTTGTAGTT TERM 425 445363 - 445377 + H 70 -5 -4.54821 | overlap 445364 AAATTCGGTTTTGCG TTAGGA TTT TCCTAG TTTTATAATTAAGGT TERM 426 446423 - 446398 - g 83 -10.7 -3.21827 | opp_overlap 446402, overlap 446391 446402 AGAAAAATTAGCCAA TCAATATAAAC CAAG GTTTATATTGA TAGAAGATAAAGCAA RBE_0401 445469 - 446722 + | putative phage terminase protein RBE_0402 449298 - 446719 - | Type I site-specific restriction-modification system, R (restriction) subunit TERM 427 448679 - 448701 + gT 80 -9.4 -3.42574 | opp_overlap 448681 448686 ATAACAGATGCATTA CATTTAATTA ATT TAATTAAATG TTCTGATGAAATTGC RBE_0403 449575 - 449186 - | Type I site-specific restriction-modification system, R (restriction) subunit TERM 428 449666 - 449681 + r 86 -2.5 -6.15259 | opp_overlap 449649 449647 449645, overlap 449649 CTCCAACAATATATT GTGAG GATTAA CTCGC TTTTTTTTTCAGTTC hsdS 450610 - 449873 - | restriction endonuclease S subunits TERM 429 450505 - 450471 - G 74 -7.6 -3.90744 | opp_overlap 450471 TGTGGGTTTAAACAA TTTTTTAATAATTT TTTAGCT AAATTATTAAAAAA TTTTTCATTTAAGCT TERM 430 450471 - 450505 + g 89 -7.6 -4.99134 | opp_overlap 450471 TGTGGGTTTAAACAA TTTTTTAATAATTT TTTAGCT AAATTATTAAAAAA TTTTTCATTTAAGCT RBE_0405 451072 - 450734 - | hypothetical protein TERM 431 450828 - 450811 - G 74 -5.6 -4.76233 | opp_overlap 450811 CAATAAAAGAACAAA CTGCAA TATCCT TTGCAG TTTCAGAATCTTTAG RBE_0406 452592 - 451078 - | Type I restriction-modification system, M subunit TERM 432 451861 - 451879 + g 73 -7.5 -3.68738 | overlap 451864 CATATTCATCTGTGC TAATGCC CATGT GGCATTA TTCATTTCTTGACCG ubiA 453606 - 452776 - | prenyltransferase RBE_0408 454894 - 453911 - | hypothetical protein RBE_0409 455334 - 455161 - | lysozyme RBE_0410 455610 - 455738 + | hypothetical protein clpP 456887 - 456093 - | ATP-dependent Clp protease proteolytic subunit TERM 433 456858 - 456842 - G 78 -2.3 -5.77677 | opp_overlap 456842, overlap 456835 GAAAATAATAAAAAA TACTAAT TTT ATGAGTA TTTTTAACTGGCTCT rpsA 458637 - 456919 - | 30S ribosomal protein S1 TERM 434 457030 - 457046 + g 74 -5.3 -4.79174 | TGCTATTTTATAGGC TTTTATT GAT AATAAAA TTTTATTGGTTGACT TERM 435 457068 - 457088 + g 74 -6.9 -4.30177 | opp_overlap 457073, overlap 457055 TGGTTGACTTTTCGA TAGAAGCAA CTT TTGCTTCGA TTTCTTGATCTACTG TERM 436 457136 - 457149 + g 80 -5.3 -5.1675 | TGTTCTTCTTTTTCA TCTGA TAAA TCAGA TTTTTTAATAAATCC TERM 437 457737 - 457751 + g 81 -4.3 -5.40072 | AATCAGCAAAATTTG TGACT TTTCC AGTCA TTTTTTTACCGACAG TERM 438 458719 - 458703 - R 89 -6.7 -5.45652 | AGGGTTAATAAAAAA GATATTT TCC AAATATC ACTGTCATACCGTGG TERM 439 458795 - 458825 + r 84 -8.6 -4.33182 | opp_overlap 458802, overlap 458802 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCC TERM 440 458818 - 458802 - R 78 -6.7 -4.67353 | opp_overlap 458795 458802 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 441 458802 - 458818 + r 95 -6.7 -5.77677 | opp_overlap 458802, overlap 458795 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC cmk 459644 - 458991 - | cytidylate kinase TERM 442 460342 - 460361 + G 74 -6.4 -4.37658 | opp_overlap 460340 CTCCTTGTATTAAGC TGGCTAGA AATT TCCAGCCA TTTTCTCAAAAAATT TERM 443 460436 - 460397 - g 95 -5.8 -5.79588 | TGAAAATGAAAAAAA TTTGGGCTTAACTCAAAA TAAA TTTGGGGTGAAACCCAAA GAAATTTTGCCTCAA TERM 444 460521 - 460499 - g 81 -4.3 -5.35721 | opp_overlap 460514 460518 AGATAATAATAAAAA TATATCTAA TAAAT CTAGATATA GCAAATCTATAATTT RBE_0414 459960 - 461669 + | hypothetical protein dam2 462483 - 461671 - | site-specific DNA adenine methylase TERM 445 461992 - 462015 + g 73 -9 -2.83504 | gap 1, opp_overlap 461988 461992 461990, overlap 461991 461988 CATAGCACAAATAGA TGT-GTCAGCT AAA AGCTGACTACA CTGTTTTAATCGAGA TERM 446 462015 - 461992 - G 77 -9 -3.37299 | gap 1, opp_overlap 461991 461988 461992, overlap 461988 461990 CATAGCACAAATAGA TGT-GTCAGCT AAA AGCTGACTACA CTGTTTTAATCGAGA TERM 447 463130 - 463144 + G 79 -5 -5.30155 | opp_overlap 463130, overlap 463132 TACATGGATTAAAGA TTCCAT GTA ATGGGA TTTTTTCATTAGTAA TERM 448 463458 - 463479 + G 80 -8.9 -3.72695 | opp_overlap 463458 463450 463463 463467 GGCAATATTAGAGCA GTTAATAGA TAAT TCTATTAAC TTTACTAAAGAAGGT TERM 449 463479 - 463458 - g 72 -8.9 -2.70232 | opp_overlap 463458, overlap 463450 463463 463467 GGCAATATTAGAGCA GTTAATAGA TAAT TCTATTAAC TTTACTAAAGAAGGT RBE_0416 462877 - 463827 + | Signal transduction histidine kinase TERM 450 464155 - 464142 - g 75 -2.4 -5.52347 | overlap 464150 AATAAAATTAAAAAA GCAA TTTATT TTGC TAAAAAGTATCATGG spoT6 463938 - 464684 + | guanosine polyphosphate pyrophosphohydrolase/synthetase RBE_0418 468008 - 465057 - | hypothetical protein TERM 451 466298 - 466279 - G 73 -4.4 -5.00616 | opp_overlap 466269 466279 466282 GTCTCTTCTAAAAAA GAATTATC TGAT AATAATTC TGATTCATACTTCTT spoT16 468982 - 469629 + | guanosine polyphosphate pyrophosphohydrolase/synthetase traD_Ti 470138 - 469845 - | conjugal transfer protein TraD TERM 452 470562 - 470577 + H 70 -6.2 -4.17987 | opp_overlap 470562 470560 470558, overlap 470558 GGTTAACGCAATATA TAAACC TGAA GGTTTA TTATTTGCTTATTTG TERM 453 473015 - 472999 - g 75 -9.5 -2.79321 | overlap 472994 GTGAGATCAAGATCA TCTGCTA AGG TAGCAGA AATCCTAAGAAGCAC traA_Ti 470665 - 474816 + | conjugal transfer protein TraA RBE_0422 474861 - 475928 + | transposase traD_F 478128 - 476440 - | putative conjugative transfer protein TraD RBE_0424 479326 - 478133 - | TPR repeat-containing protein TERM 454 478356 - 478380 + g 77 -8.8 -3.57816 | opp_overlap 478360 TAATCAGATTTATAC TTAATAGCTA GATCA TAGCTATTAA TTGCTTCTTGATATT traG 482030 - 479313 - | conjugative transfer protein TraG TERM 455 479638 - 479649 + g 70 -4.4 -4.90778 | opp_overlap 479638, overlap 479633 GTATTTTTATCAAAA CTTG ATCG CAAG TTTTCTTTAGATGGA traH 483448 - 482108 - | F pilus assembly protein TraH traF 484334 - 483432 - | F pilus assembly protein TraF traN 486147 - 484336 - | conjugative transfer protein TraN TERM 456 484994 - 485004 + g 93 -6.8 -5.37345 | opp_overlap 484993 GATCCTGCTATAGAG GAGC TAA GCTC TTTTTTCTCATTAGA trbC 486578 - 486144 - | conjugative transfer protein TrbC traU 487591 - 486623 - | conjugal DNA transfer protein TraU traW 488630 - 487866 - | conjugative transfer protein TraW RBE_0432 491390 - 488802 - | conjugative transfer protein TraC TERM 457 489067 - 489083 + gr 72 -8.7 -2.99596 | opp_overlap 489066 TCATCGACAAAACCT GCAAGCT TAG GGCTTGC TCTCATTGCTTTAAA TERM 458 490751 - 490741 - GR 78 -4 -5.42975 | TCATATAAAGAAAAA TTAC CAG GTAA AATCTGCTCAGATAA traV 491571 - 491317 - | conjugative transfer protein TraV traB 492989 - 491571 - | F pilus assembly protein TraB RBE_0435 493347 - 493015 - | hypothetical protein RBE_0436 493762 - 493307 - | hypothetical protein traE 494313 - 493762 - | conjugative transfer protein TraE RBE_0438 494621 - 494313 - | hypothetical protein RBE_0439 496813 - 495029 - | leucine-rich repeat-containing protein TERM 459 495527 - 495504 - G 71 -3.2 -5.27477 | overlap 495505 ATTCTAACCAAAAAA GCATATTGAT CAAT ATCAACATGA GGGTATGTATTCTTT RBE_0440 498019 - 496853 - | integrase RBE_0441 499971 - 498421 - | cassette chromosome recombinase B TERM 460 498557 - 498531 - G 74 -3.1 -5.40072 | overlap 498533 CGCCGTTTAAAAAAA GGTTAGCAAAT ACTAA ATTTACTAATC GCCTTTTTTCGGCAA TERM 461 499752 - 499767 + g 74 -6.2 -4.45485 | TTGCTACTATTTCCT TTTGCT GCTT AGCAAA TTTTATAGCTGTCAT TERM 462 499943 - 499953 + g 91 -5.4 -5.80248 | CTTACTAGTATTATT GCAA ATT TTGC TTTTTTTCTCTCTTC RBE_0442 500804 - 500535 - | hypothetical protein TERM 463 501263 - 501273 + H 70 -4 -4.85177 | TATATCTTTAGCTCA TTAC ATG GTAA TTTTTAGTATAGTTT TERM 464 501361 - 501373 + G 74 -6.3 -4.35992 | opp_overlap 501361, overlap 501358 ACTCAAATGTTGAAA GAGAT AGC ATCTC TTCTTTATTATTCTA RBE_0443 501267 - 502196 + | putative permease TERM 465 502534 - 502521 - g 85 -2.4 -6.20267 | opp_overlap 502521 TTAAAAATAAAAAAA CCTA TTTGGC TAGG TACTTCAATGGGCGG TERM 466 502983 - 502972 - g 74 -3 -5.32608 | opp_overlap 502972 AAAAAATGCAAAAAA CAAA AGAT TTTG ATCTTTACGAAATTA RBE_0444 502206 - 503075 + | putative hydrolase/acyltransferase trxB1 503095 - 504027 + | thioredoxin reductase RBE_0446 505238 - 504381 - | ubiquinone/menaquinone biosynthesis methlytransferase UbiE TERM 467 505372 - 505392 + H 76 -9.9 -2.80545 | opp_overlap 505372, overlap 505371 505384 GGAGTTAAGTATAAA TTTTAACTG AAG CAGTTAAAA CTGTTTTGGGGTGTC TERM 468 505392 - 505372 - H 91 -9.9 -4.06904 | opp_overlap 505372 505371 505384 GGAGTTAAGTATAAA TTTTAACTG AAG CAGTTAAAA CTGTTTTGGGGTGTC TERM 469 505484 - 505445 - H 71 -7.2 -3.79747 | gap 1, opp_overlap 505443 505441, overlap 505448 505450 GTATCTACCATTAAA TGATACCACCCTCGACTAT ATT ATGGTCG-GGGTGGTAATA GGTATGTCTAGAGCT TERM 470 505481 - 505448 - H 100 -13.3 -2.98493 | gap 1, opp_overlap 505443 505441, overlap 505445 505450 TCTACCATTAAATGA TACCACCCTCGACTAT ATT ATGGTCG-GGGTGGTA ATAGGTATGTCTAGA TERM 471 505479 - 505450 - H 87 -11.5 -3.04415 | gap 1, opp_overlap 505443 505441, overlap 505448 505445 TACCATTAAATGATA CCACCCTCGACTAT ATT ATGGTCG-GGGTGG TAATAGGTATGTCTA RBE_0447 505620 - 506078 + | hypothetical protein RBE_0448 508313 - 506202 - | hypothetical protein TERM 472 507168 - 507189 + g 70 -3.9 -4.98672 | gap 1, opp_overlap 507170 507172, overlap 507169 507170 ACTTATCATTTTAAT TA-TACTAGT ATA ACTAGTACTA TTTTCTATTTTTCCA TERM 473 507170 - 507186 + g 70 -8.1 -3.03187 | opp_overlap 507170 507172, overlap 507169 507168 TTATCATTTTAATTA TACTAGT ATA ACTAGTA CTATTTTCTATTTTT TERM 474 507606 - 507622 + g 70 -3.8 -5.10154 | TGTAGCTTCCTGTTC TAAAAG TTTTT CTTTTA TTTTTGCTTTTCGAT TERM 475 508914 - 508901 - g 71 -8.1 -3.21099 | CTGTTTTATTAGTAA TGCCC GGTG GGGCA GATATACCTTATACT TERM 476 509152 - 509142 - g 74 -5.4 -4.80453 | overlap 509144 TGATTATAAAACAAA TAGC GGA GCTA AGGCTGCACTACTCA bpl1 508675 - 509502 + | biotin-protein ligase RBE_0450 509547 - 509768 + | hypothetical protein TERM 477 509987 - 510001 + G 71 -2.9 -5.26316 | opp_overlap 509975, overlap 509975 AATTTTTTAGTCCAA CTAAA GATAG TTTAG TTTTTTATGGAGTCA RBE_0451 509833 - 510639 + | hypothetical protein TERM 478 511444 - 511421 - f 81 -4.8 -5.34632 | gap 1, opp_overlap 511421 511425, overlap 511427 AATAAAATATAAAAA TAATTACAACT AAT AGTTG-AATTA TTATTTCGGATATTG RBE_0452 511494 - 512159 + | hypothetical protein TERM 479 512291 - 512319 + T 87 -8.4 -4.73105 | overlap 512286 512298 CATACGCAATTCAGC TAAAAAATGCTG ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 480 512298 - 512312 + T 80 -2.1 -5.80727 | overlap 512286 512291 AATTCAGCTAAAAAA TGCTG ACTTA TAGCA TTTTTTATTATTTTT RBE_0453 513225 - 512560 - | hypothetical protein rpsU 513256 - 513456 + | 30S ribosomal protein S21 TERM 481 513517 - 513482 - T 72 -4.8 -4.87803 | opp_overlap 513487, overlap 513487 TAGTTTCAAATAAAA TGAAAGGCAAGTTATT ATTA AATAGCTTGCCTTTTT TGTTATGTGTAACGT TERM 482 513487 - 513512 + T 100 -11.3 -5.62045 | opp_overlap 513482 513487 TCAAATAAAATGAAA GGCAAGTTATT ATTA AATAGCTTGCC TTTTTTGTTATGTGT TERM 483 513512 - 513487 - T 100 -9.1 -4.37871 | opp_overlap 513487, overlap 513482 TCAAATAAAATGAAA GGCAAGTTATT ATTA AATAGCTTGCC TTTTTTGTTATGTGT TERM 484 513796 - 513768 - T 78 -7 -4.5448 | TATCCAGAAAAATAA TAAAAAATACTA TAAGT TAGCATTTTTTA ACTGGCTCTAGTTCA znuB 514647 - 513868 - | Zinc/manganese ABC transporter permease protein TERM 485 514373 - 514361 - G 72 -3.5 -5.18726 | overlap 514364 TGGGCAGAAGAAAAA TAATT AAT AATTA AAGCAATAGCCAGCA ubiG 514665 - 515387 + | 3-demethylubiquinone-9 3-methyltransferase TERM 486 515431 - 515454 + F 82 -11 -2.80344 | overlap 515430 AAAGCAACATCGGTG TCATTCCCGC CTAT GCGGGAAGGA ATTGTTGAGTGGAAC TERM 487 515532 - 515496 - f 100 -9.1 -4.42653 | opp_overlap 515506, overlap 515506 ACGGTATCCAGAAAA TAATAAAAAATACTAAT AAA ATTAGTATTTTTAACTA GATCCCGTGAATAAA TERM 488 515506 - 515522 + F 78 -6.7 -4.67353 | opp_overlap 515496 515506 GAAAATAATAAAAAA TACTAAT AAA ATTAGTA TTTTTAACTAGATCC TERM 489 515522 - 515506 - f 95 -6.7 -5.77677 | opp_overlap 515506, overlap 515496 GAAAATAATAAAAAA TACTAAT AAA ATTAGTA TTTTTAACTAGATCC TERM 490 515555 - 515535 - f 87 -11.2 -2.90723 | GTATTTTTAACTAGA TCCCGTGA ATAAA TCACGGGA TGACAGGGGAAAATG TERM 491 515728 - 515744 + G 93 -10.1 -4.71061 | TGATTACTAGATTTG CTCCGTC ACC GACGGGG TTTTTACATATAGGT TERM 492 516779 - 516797 + G 74 -9 -3.0517 | opp_overlap 516772 516771 516769, overlap 516778 TGAAACACTGCTAGA TTTAGCAA AGC TTGCTAAA ATTTATCTAGTAAAT gltX 515700 - 517094 + | glutamyl-tRNA synthetase RBE_0458 517091 - 517627 + | hypothetical protein RBE_0459 517849 - 518097 + | acetyltransferase GNAT family protein TERM 493 518490 - 518480 - g 85 -6.8 -4.98857 | ACGCAAGTAGAAAAA TGGG TAG CCCA AAATGTAAAAATTAC RBE_0460 518177 - 519400 + | Fic family protein RBE_0461 519427 - 520458 + | acetyltransferase TERM 494 520908 - 520896 - g 72 -4.9 -4.8048 | GCCTGATAGTAAAAA TATAG CAG CTATA AAAACTTATGAAAAA RBE_0462 520471 - 521034 + | hypothetical protein RBE_0463 521511 - 520987 - | hypothetical protein TERM 495 521355 - 521375 + g 78 -9.7 -3.21416 | overlap 521358 TTCCTAGAGCCGTTC CAACCCCGA CTG TCGAGGTTG TTAATACTAAACCTC TERM 496 521652 - 521616 - R 100 -9.1 -4.94992 | opp_overlap 521626, overlap 521619 521620 521626 TGAAATCCAGAAAAA CAACTAAAAATATCAAT ATT ATTGATATTTTTAACTA GATTGCTTCGTCAAT TERM 497 521649 - 521619 - R 100 -10.8 -4.55383 | opp_overlap 521626, overlap 521616 521620 521626 AATCCAGAAAAACAA CTAAAAATATCAAT ATT ATTGATATTTTTAA CTAGATTGCTTCGTC TERM 498 521648 - 521620 - R 95 -12.1 -3.31603 | opp_overlap 521626, overlap 521619 521616 521626 ATCCAGAAAAACAAC TAAAAATATCAAT ATT ATTGATATTTTTA ACTAGATTGCTTCGT TERM 499 521642 - 521626 - R 83 -6.7 -5.10004 | opp_overlap 521626, overlap 521620 521619 521616 AAAAACAACTAAAAA TATCAAT ATT ATTGATA TTTTTAACTAGATTG TERM 500 521626 - 521642 + r 78 -6.7 -4.68424 | opp_overlap 521626 521620 521619 521616 AAAAACAACTAAAAA TATCAAT ATT ATTGATA TTTTTAACTAGATTG TERM 501 521705 - 521740 + r 75 -9.8 -2.56273 | gap 1, opp_overlap 521704 521701 521705 521725 GATGGAAAAAATGAC CCATGCGGGCAATGC AAACACG GC-TTGACCGCATGG TAAATTCACTATAGT TERM 502 521740 - 521705 - R 76 -9.8 -2.63182 | gap 1, opp_overlap 521705, overlap 521704 521701 521725 GATGGAAAAAATGAC CCATGCGGGCAATGC AAACACG GC-TTGACCGCATGG TAAATTCACTATAGT RBE_0464 522101 - 521757 - | hypothetical protein aas 525640 - 522206 - | acylglycerophosphoethanolamine acyltransferase TERM 503 523633 - 523617 - G 83 -6.7 -4.92757 | opp_overlap 523617, overlap 523612 TCACCAAGAATAAAA GATTTAA GTA TTAAATC TTGATAAGTAGCTTT RBE_0466 527103 - 525904 - | hypothetical protein TERM 504 528027 - 528017 - g 71 -5.4 -4.6341 | ACGAGAAAAAAAATA TTGC GAG GCAA GGGGGTGGTGAAGAT TERM 505 528612 - 528596 - g 73 -8 -3.39895 | overlap 528607 528608 CTGGCGAGGAAGTAA GCCAAG AGAAA CTTGGC GGTGCACGTATGCAC TERM 506 529222 - 529206 - g 78 -9.5 -3.21354 | opp_overlap 529205 TTATATAGTGATGAA CTCTAAG CAT CTTAGAG GTGATATAAATTATG pccB 527965 - 529509 + | propionyl-CoA carboxylase beta chain precursor RBE_0468 529662 - 530108 + | hypothetical protein TERM 507 531538 - 531549 + G 81 -4.4 -5.4433 | TAACAGGAGTATTTT TAGC AACC GCTA TTTTTATTTATATAT accC 530136 - 532133 + | Acetyl-CoA carboxylase, biotin carboxylase TERM 508 532194 - 532161 - f 87 -11.3 -3.0439 | opp_overlap 532166, overlap 532166 ATTTATTAGAAAGCA TAAAAGCTAGAAATA GTGG TATTTCTAGCTTTTT TTGTTATTATAGTCA TERM 509 532189 - 532166 - f 100 -11.2 -4.64846 | opp_overlap 532166, overlap 532161 TTAGAAAGCATAAAA GCTAGAAATA GTGG TATTTCTAGC TTTTTTTGTTATTAT TERM 510 532166 - 532189 + F 100 -11.2 -5.97979 | opp_overlap 532166 532161 TTAGAAAGCATAAAA GCTAGAAATA GTGG TATTTCTAGC TTTTTTTGTTATTAT TERM 511 532278 - 532266 - f 76 -9.1 -3.15544 | opp_overlap 532256, overlap 532268 CGTCATTGCGAGGAA GAGGC GAA GCCTC GACGTGGCAATCTTA TERM 512 532280 - 532321 + F 100 -12.5 -3.57418 | gap 1, opp_overlap 532268, overlap 532256 532278 532281 AGAGGCGAAGCCTCG ACGTGGCAATCTTA-GGAGT TCT ACTTCATGAGATTGCCACGC TTCCTTTGGTCGCTC TERM 513 532281 - 532320 + F 100 -16 -2.73969 | gap 1, overlap 532256 532280 532278 GAGGCGAAGCCTCGA CGTGGCAATCTTA-GGAGT TCT ACTTCATGAGATTGCCACG CTTCCTTTGGTCGCT ntrY 532405 - 534237 + | nitrogen regulation protein NtrY RBE_0471 534645 - 536657 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase RBE_0472 536781 - 537440 + | hypothetical protein TERM 514 537831 - 537794 - f 78 -6.6 -4.54727 | gap 2, overlap 537772 537771 537795 537798 537803 TTTTTTAAAGTAAAA CTGA--CAGAATCAAACT TGAG AGTTTGATCCTGGCTCAG AACGAACGCTATCGG TERM 515 537825 - 537798 - f 100 -12.2 -2.82666 | overlap 537772 537771 537795 537794 537803 TTAAAGTAAAACTGA CAGAATCAAACT TGAG AGTTTGATCCTG GCTCAGAACGAACGC TERM 516 537875 - 537898 + F 81 -10.4 -3.14132 | opp_overlap 537875 537879, overlap 537879 TGCAAGTCGAACGGA CTAATTGGGG CTTG CTCCAATTAG TTAGTGGCAGACGGG TERM 517 539288 - 539269 - f 73 -9.2 -2.65808 | opp_overlap 539265 539269, overlap 539266 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTA TERM 518 539269 - 539288 + F 85 -11.4 -2.5602 | opp_overlap 539269 539266, overlap 539265 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTA TERM 519 539568 - 539593 + F 78 -9.7 -3.10545 | gap 1, overlap 539565 ACAGAAAAGTTTCGC TCCTCGCAAGGC ATT GCCT-GCGTGGA TCATTTTCCCCTGTC TERM 520 539640 - 539662 + F 72 -5 -4.72617 | opp_overlap 539643, overlap 539643 ACTAGAGCCAGTTAA AAATACTAAT AAA ATTAGTATTA TTTATTATTTTCTGG TERM 521 539659 - 539643 - f 78 -6.7 -4.67755 | opp_overlap 539640 539643 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 522 539643 - 539659 + F 76 -6.7 -4.42118 | opp_overlap 539643, overlap 539640 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTATTTATTATTTTC TERM 523 539789 - 539770 - f 76 -9.4 -3.06087 | opp_overlap 539770, overlap 539761 539759 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 524 539770 - 539789 + F 75 -9.4 -3.01924 | opp_overlap 539770 539761 539759 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0473 539950 - 540756 + | transposase RBE_0474 540743 - 540907 + | transposase RBE_0475 540980 - 541585 + | hypothetical protein TERM 525 541641 - 541669 + T 74 -6.2 -4.38744 | opp_overlap 541641 541648, overlap 541648 GAAAATGTTGAAGTA TAAAAAATGCTA ATTTA TAGCATTTTCTA TTATTTTCTCTGGAT TERM 526 541648 - 541662 + T 70 -4.3 -4.88288 | opp_overlap 541648 541641, overlap 541641 TTGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTCTATTATTTTC TERM 527 541662 - 541648 - T 78 -4.3 -5.37345 | opp_overlap 541641 541648, overlap 541641 TTGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTCTATTATTTTC RBE_0476 543848 - 541746 - | hypothetical protein TERM 528 541991 - 542003 + g 77 -4.1 -5.41746 | overlap 541979 TTCCACCTTTACTAT GGTGT AAT ATACC TTTTTTTAGAGCGTT TERM 529 543693 - 543705 + g 82 -7.7 -4.45083 | ATTAACTATTTCCAC TGCTG CAT CAGCA TTTTCTACATATAAA RBE_0477 544037 - 544792 + | cephalosporin hydroxylase RBE_0478 544801 - 545754 + | cephalosporin hydroxylase RBE_0479 546699 - 546265 - | hypothetical protein RBE_0480 547409 - 546810 - | hypothetical protein RBE_0481 548244 - 547414 - | hypothetical protein RBE_0482 548497 - 548237 - | antitoxin of toxin-antitoxin (TA) system Phd RBE_0483 548907 - 548542 - | alkylated DNA repair protein RBE_0484 549200 - 548904 - | acetyltransferase RBE_0485 549552 - 549301 - | acetyltransferase RBE_0486 550039 - 549539 - | putative transcription activator RBE_0487 550112 - 550558 + | hypothetical protein mazG 550563 - 551048 + | MazG-like protein RBE_0489 552391 - 551672 - | ankyrin repeat-containing protein mutT 552779 - 552360 - | ADP-ribose pyrophosphatase MutT TERM 530 552494 - 552512 + gr 71 -7.5 -3.53811 | opp_overlap 552493 AGTTTTGTAATTCAT GCTCATT CAAAC AATGAGC TTTAAGGAAAATCGA RBE_0491 553207 - 552794 - | hypothetical protein msbA2 555019 - 553292 - | multidrug resistance protein TERM 531 554573 - 554561 - G 75 -4.9 -5.08011 | AAAACTTTCAAAAAA CATTA AAA TAATG CTACCGACTAACATC TERM 532 555146 - 555117 - R 77 -5.9 -4.87665 | overlap 555137 CGGGATCCAGAAAAA CAATAAAAAATAC TAAC GTATTTTTAACTG GACCCCGTGGTCAAG RBE_0493 555759 - 555442 - | hypothetical protein RBE_0494 556019 - 555756 - | hypothetical protein RBE_0495 556120 - 556473 + | HicB-like protein exsB 556470 - 557147 + | trans-regulatory protein ExsB RBE_0497 557275 - 557144 - | hypothetical protein rimJ 557295 - 557846 + | ribosomal-protein-alanine acetyltransferase clpX 558174 - 559457 + | ATP-dependent protease ATP-binding subunit TERM 533 559524 - 559536 + T 84 -9.1 -3.82433 | opp_overlap 559522, overlap 559532 TTGCTTTATGAGATT GCCAC GTC GTGGC TTTGCTGCTCCTTGT RBE_0500 560888 - 559596 - | hypothetical protein TERM 534 559916 - 559932 + g 71 -2.3 -5.38958 | opp_overlap 559903 ATTCAAACAATAATT TGATAAT TTT AATATCA TTTTTATTTATAGCT RBE_0501 561207 - 560917 - | hypothetical protein TERM 535 561025 - 561053 + g 85 -8.3 -4.67353 | TAAACGATTTCTTTC TATATCCAAAAGA AAA TCTTCTGGATGTA TTTTTAAATGCCTAA RBE_0502 561591 - 562877 + | RmuC family protein TERM 536 563507 - 563496 - g 70 -4.4 -4.9138 | opp_overlap 563496 AGTACCTAAAGAAAA CACT AGAG AGTG GTTATCTGAATGCAA RBE_0503 562891 - 563841 + | Alpha-(1,3)-fucosyltransferase TERM 537 563856 - 563844 - g 76 -3.5 -5.36689 | opp_overlap 563853, overlap 563832 563848 563853 AAATGAAAAATAAAA TTTAT CAC ATAAA AAAGTATTTTTTTAT TERM 538 564487 - 564498 + G 73 -4.4 -5.01535 | opp_overlap 564487 564496, overlap 564496 TCTTAAAAAAATTAA TACC CAAA GGTA TTTTTATACTTCTAC RBE_0504 563831 - 564703 + | glycosyltransferase RBE_0505 566067 - 564790 - | Poly-beta-hydroxyalkanoate depolymerase TERM 539 565378 - 565392 + g 70 -7.2 -3.56972 | opp_overlap 565377 AAACCACTCCAAACT TTTGCT TAA AGCAAA TTCATTTACTGCGGT RBE_0506 566912 - 566181 - | hypothetical protein RBE_0507 568074 - 567103 - | hypothetical protein RBE_0508 569092 - 568343 - | LPS biosynthesis protein TERM 540 568635 - 568646 + gr 89 -3 -6.20267 | GTTTTTAAATTAGCA TGAA TAAA TTCA TTTTTTTCTTTTTGA valS 571499 - 569061 - | valyl-tRNA synthetase TERM 541 569655 - 569671 + gr 85 -3.7 -5.82172 | AGTAATTTTTTCTTT CACATCT ATA AGATTTG TTTTTTTATCTTCAT TERM 542 571435 - 571451 + gr 87 -3.7 -5.89947 | TAAATTTGCTTTTCT TGCCAAA TCT TTTGCCA TTTTTTTTCGCTTTC RBE_0510 572783 - 571866 - | transposase rnhB 573477 - 572887 - | ribonuclease HII hscB 573535 - 574035 + | co-chaperone HscB TERM 543 575682 - 575695 + G 79 -8.1 -3.97042 | opp_overlap 575670 575681 575679 AAGCATGCAATAGAT GCACG AGAT CGTGC TTTAATTAATAATGC hscA 574026 - 575813 + | chaperone protein HscA fdxB 575829 - 576164 + | ferredoxin TERM 544 577078 - 577065 - g 74 -6.7 -4.23647 | opp_overlap 577065 AAAGCAGTTAATAAA GCTTC CGAT GAAGC TGTAGTTAAAGAATC RBE_0515 576177 - 577247 + | hypothetical protein imp 577237 - 578208 + | TRAP-type uncharacterized transport system, periplasmic component uspA 578239 - 578670 + | universal stress protein UspA-like nucleotide-binding protein TERM 545 578783 - 578745 - f 71 -3.4 -5.28481 | opp_overlap 578744 578752 578754, overlap 578748 578749 578750 578752 TAGCTAATTAAAAAA TAATTTATATTTTCTATT ATT AATAGAAAATATAGTTGA CATTTTAGAAAAGCT TERM 546 578780 - 578748 - f 72 -5.1 -4.72473 | opp_overlap 578744 578752 578754, overlap 578745 578749 578750 578752 CTAATTAAAAAATAA TTTATATTTTCTATT ATT AATAGAAAATATAGT TGACATTTTAGAAAA TERM 547 578779 - 578749 - f 76 -8.6 -3.41857 | opp_overlap 578744 578752 578754, overlap 578748 578745 578750 578752 TAATTAAAAAATAAT TTATATTTTCTATT ATT AATAGAAAATATAG TTGACATTTTAGAAA TERM 548 578778 - 578750 - f 89 -12.1 -2.63487 | opp_overlap 578744 578752 578754, overlap 578749 578748 578745 578752 AATTAAAAAATAATT TATATTTTCTATT ATT AATAGAAAATATA GTTGACATTTTAGAA TERM 549 578776 - 578752 - f 78 -10.3 -2.83192 | opp_overlap 578744 578752 578754, overlap 578750 578749 578748 578745 TTAAAAAATAATTTA TATTTTCTATT ATT AATAGAAAATA TAGTTGACATTTTAG TERM 550 578752 - 578776 + F 78 -10.3 -2.78738 | opp_overlap 578752 578750 578749 578748 578745, overlap 578744 578754 TTAAAAAATAATTTA TATTTTCTATT ATT AATAGAAAATA TAGTTGACATTTTAG TERM 551 578819 - 578807 - f 72 -6.3 -4.22948 | opp_overlap 578817 AAAAGCTAGCTAAAA TCCTT TGC AAGGA TAGCAGTAATGCTAT TERM 552 578817 - 578836 + F 85 -10.8 -3.12351 | opp_overlap 578807 578820 TAAAATCCTTTGCAA GGATAGCA GTAA TGCTATCC TTGGGTATAGAAGCC RBE_0518 579600 - 579986 + | hypothetical protein cydA 581942 - 580581 - | cytochrome d ubiquinol oxidase subunit I RBE_0520 582258 - 581986 - | hypothetical protein TERM 553 582876 - 582901 + G 74 -6.9 -4.21607 | opp_overlap 582876 ATTCTCCGCAAGCTA GCAATTATTGC TTTT GCACTAGTTGC TTTATATTCGGTACA TERM 554 583602 - 583622 + G 71 -8.3 -3.27246 | opp_overlap 583602 583604 583607, overlap 583601 TTAATTACCAGATTA CATGACATC GAA GATGGCATG ATTTTAATTGATGGT abcT3 582411 - 584180 + | multidrug ABC transporter ATP-binding protein TERM 555 584299 - 584247 - T 83 -8.7 -4.05788 | gap 1 GTTCGGTAAATGAAA TGAGCATGGCAATCTTATGAAACA GTATGA TACTCC-TGAGATTGCCACGCTCA CTCGCAAGGCATTGT TERM 556 584420 - 584436 + T 95 -6.7 -5.77677 | opp_overlap 584420 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 557 584436 - 584420 - T 83 -6.7 -5.09895 | opp_overlap 584420 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC mpp 585793 - 584555 - | protease TERM 558 585833 - 585857 + r 81 -10 -3.48593 | overlap 585835 GTCATACAATATTGT CATCCCGTGG CTTGT CCACGGGATC TTGTATAACAAACTG TERM 559 585835 - 585855 + r 100 -12.6 -3.31726 | overlap 585833 CATACAATATTGTCA TCCCGTGG CTTGT CCACGGGA TCTTGTATAACAAAC lgtF 586703 - 585819 - | Beta 1,4 glucosyltransferase TERM 560 586255 - 586271 + g 79 -3.7 -5.55769 | opp_overlap 586255 GTGCTATTTATAGTA TTTGCAA AAC TAGCAAA TTTTTTATTATACAA RBE_0524 586966 - 586706 - | putative toxin of toxin-antitoxin (TA) system RBE_0525 587219 - 586977 - | antitoxin of toxin-antitoxin (TA) system StbD rpoH 588124 - 587240 - | RNA polymerase factor sigma-32 TERM 561 587928 - 587944 + g 74 -9.5 -2.53995 | opp_overlap 587925 587928 TAAGTTCTATAACCA GTTGCAA TTT TTGCAAC TAACTTAAGATGGCT TERM 562 587944 - 587928 - G 75 -9.5 -2.83747 | opp_overlap 587928, overlap 587925 TAAGTTCTATAACCA GTTGCAA TTT TTGCAAC TAACTTAAGATGGCT TERM 563 587957 - 587969 + g 71 -7.7 -3.50447 | opp_overlap 587956 AACTAACTTAAGATG GCTAG TTA CTAGC TTATGTGCAGCTTGC cox11 588215 - 588757 + | cytochrome C oxidase assembly protein RBE_0528 588837 - 589079 + | transcriptional regulator RBE_0529 589063 - 589479 + | hypothetical protein RBE_0530 590474 - 589476 - | hypothetical protein TERM 564 590070 - 590085 + g 73 -4.6 -5.04356 | opp_overlap 590069 590071, overlap 590071 TAAATATACTATAAT AGCTCC CTCG GGAGCA TTTTTCATTGTTTCA TERM 565 590071 - 590084 + g 75 -8.1 -3.60987 | opp_overlap 590069 590071, overlap 590070 AAATATACTATAATA GCTCC CTCG GGAGC ATTTTTCATTGTTTC TERM 566 590084 - 590071 - G 71 -8.1 -3.33782 | opp_overlap 590071 590070, overlap 590069 AAATATACTATAATA GCTCC CTCG GGAGC ATTTTTCATTGTTTC trmU 590638 - 591741 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 567 591961 - 591991 + G 72 -9 -2.77222 | overlap 591960 TAAAAGAAATAGGTA GCTCGAGCGGTCTT AGT AAGACCCTTGGAGC ATTTGACCTAATACT atrC1 591912 - 593306 + | cationic amino acid transporter-1 TERM 568 593348 - 593370 + F 70 -5 -4.52873 | GTCCACGGGATCCAG TAAAAAATAC GTA GTATTTTTAA TTATTTTTCTGGACC TERM 569 594078 - 594068 - g 70 -4.6 -4.87893 | opp_overlap 594068 AAGGCTAACTAAAAA CCCG ATG CGGA TTCTTGATTCTAAAA hisS 593460 - 594707 + | histidyl-tRNA synthetase TERM 570 594952 - 594967 + G 70 -4 -4.94972 | overlap 594953 AAGTAAAACCCTATA TTCTTC TGAA GAAGAG TTTTTACTTGTAATG purC 594911 - 595621 + | phosphoribosylaminoimidazole-succinocarboxamide synthase thrS 595635 - 597542 + | threonyl-tRNA synthetase TERM 571 597549 - 597569 + F 100 -12.6 -2.83894 | TATATTTAGCTGTCA TCCCGTGG CTTGT CCACGGGA TCTAGTAATCGTCAT TERM 572 597909 - 597885 - g 70 -7.3 -3.61517 | opp_overlap 597885 ATTTCCTTTTAATAA TTCTTCAAAAT ATC ATCCTGAAGAA TTTATTGTTTCTGAG TERM 573 598032 - 598009 - g 71 -5.2 -4.71828 | overlap 598013 ACTTTACTAATAAAA GGACCTGCCT CTTC AGGCAAAACC TATCTAACCAAAATA TERM 574 598242 - 598228 - g 79 -7.2 -4.47456 | opp_overlap 598228 ACATCTAATAATAAA GGTAAA AAT TTTACC TTACCTGATCTATCA RBE_0536 597859 - 598521 + | hypothetical protein RBE_0537 598597 - 598836 + | MFS-type sugar transporter TERM 575 599267 - 599257 - g 70 -4 -4.99312 | AAGAGAAGAATAAAA TCTA GTC TAGA AAAAACCGGTTTAGA RBE_0538 598885 - 599910 + | MFS-type sugar transporter TERM 576 599967 - 599926 - f 71 -4.6 -4.77036 | opp_overlap 599925 599926, overlap 599929 GTTTAGTACTAAAAA TAAGTGATAAAGGTAAGA GGCAAT TTTTACCTTTATCACAGA ATTTATTTACCAACA TERM 577 599964 - 599929 - f 100 -10.7 -4.49314 | opp_overlap 599926 599925, overlap 599926 TAGTACTAAAAATAA GTGATAAAGGTAAGA GGCAAT TTTTACCTTTATCAC AGAATTTATTTACCA TERM 578 600331 - 600308 - g 75 -8.4 -3.65529 | ATATTTTTATCGAAA TTTATCAATA ATAA TATTGATAAA AAGGGTAGGGTATCA mraZ 600287 - 600739 + | cell division protein MraZ mraW 600739 - 601656 + | S-adenosyl-methyltransferase MraW ftsL 601659 - 602054 + | cell division protein FtsL pbpA2 602185 - 603870 + | penicillin-binding protein RBE_0543 604125 - 604370 + | hypothetical protein RBE_0544 604354 - 604626 + | hypothetical protein TERM 579 605611 - 605594 - g 79 -4.9 -5.2204 | CAGAAGCAACAAAAA TACAAGC TGAT GCTTATA AGCAAGTTGAAAAAG TERM 580 605987 - 605956 - g 73 -7.5 -3.74056 | GAAGAAGCATTGAAA TTATCAGAAGAAA GACCGG TTTCATCTGATAA GATAAACAAATTTAC RBE_0545 604744 - 606129 + | hypothetical protein TERM 581 606122 - 606105 - f 82 -4.2 -5.62288 | CCAACAAAACAAAAA GAATGA TAAAGG TCATTC GAGATAATAAAATAA TERM 582 606651 - 606632 - g 75 -5.1 -4.96028 | TCTTAAAAAAAATAA TATAAGC TTCGAT GCTTATA ACACACATTTTAACA RBE_0546 606150 - 607382 + | hypothetical protein TERM 583 607451 - 607463 + T 71 -5.5 -4.41897 | AATCATTTTCCCCAT GTCGT GCT GCGAC TTTTCCTAGTTTGTT RBE_0547 607708 - 607544 - | transposase RBE_0548 608501 - 607695 - | transposase TERM 584 608677 - 608658 - H 75 -9.4 -3.01924 | opp_overlap 608650 608646 608658 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 585 608658 - 608677 + H 76 -9.4 -3.06087 | opp_overlap 608658, overlap 608650 608646 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 586 608814 - 608778 - H 100 -11.3 -4.45485 | opp_overlap 608781 608785, overlap 608781 608785 ACTAGATCCAGAAAA TAATAAATAATACTAAT ATT ATTAGTATTATTTATTT TCCTAGATGACACCG TERM 587 608811 - 608781 - H 100 -13 -4.33785 | opp_overlap 608781 608785, overlap 608778 608785 AGATCCAGAAAATAA TAAATAATACTAAT ATT ATTAGTATTATTTA TTTTCCTAGATGACA TERM 588 608781 - 608811 + H 100 -13 -4.2828 | opp_overlap 608778 608781 608785, overlap 608785 AGATCCAGAAAATAA TAAATAATACTAAT ATT ATTAGTATTATTTA TTTTCCTAGATGACA TERM 589 608785 - 608807 + H 100 -9.4 -4.7261 | opp_overlap 608785 608781 608778, overlap 608781 CCAGAAAATAATAAA TAATACTAAT ATT ATTAGTATTA TTTATTTTCCTAGAT TERM 590 608807 - 608785 - H 100 -9.4 -4.72617 | opp_overlap 608781 608785, overlap 608781 608778 CCAGAAAATAATAAA TAATACTAAT ATT ATTAGTATTA TTTATTTTCCTAGAT TERM 591 609069 - 609051 - g 77 -8.2 -3.88029 | AGGTTATACAAAAGA GCAAGTTA GTT TAACTCGC AATCAAAAAGAAGCT RBE_0549 609031 - 610341 + | MFS-type transporter spoT17 611008 - 610304 - | guanosine polyphosphate pyrophosphohydrolase/synthetase RBE_0551 611226 - 611888 + | hypothetical protein spoT18 611904 - 612608 + | guanosine polyphosphate pyrophosphohydrolase/synthetase proP9_2 613881 - 612571 - | proline/betaine transporter TERM 592 613843 - 613861 + g 77 -8.2 -3.88029 | AGCTTCTTTTTGATT GCGAGTTA AAC TAACTTGC TCTTTTGTATAACCT RBE_0554 614150 - 615670 + | TPR repeat-containing protein TERM 593 615704 - 615685 - T 100 -10 -5.63374 | gap 1, opp_overlap 615679 615686, overlap 615686 GGAAGATTAAAAAAA GGGGGTGCA TTT TGC-CCCCC TTATACTTTGTAGAA TERM 594 615686 - 615704 + T 85 -10.2 -3.64915 | opp_overlap 615685 615686, overlap 615679 GAAGATTAAAAAAAG GGGGTGCA TTT TGCCCCCC TTATACTTTGTAGAA TERM 595 615704 - 615686 - T 93 -10.2 -3.96398 | opp_overlap 615686 615679, overlap 615685 GAAGATTAAAAAAAG GGGGTGCA TTT TGCCCCCC TTATACTTTGTAGAA RBE_0555 616418 - 615723 - | ankyrin repeat-containing protein RBE_0556 617021 - 616665 - | hypothetical protein TERM 596 616694 - 616722 + g 95 -10.6 -4.73105 | opp_overlap 616701, overlap 616701 ACGAAGCAATCCAGT TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTAGAT TERM 597 616715 - 616701 - G 73 -4.3 -5.10497 | opp_overlap 616701 616694 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 598 616701 - 616715 + g 87 -4.3 -5.80727 | opp_overlap 616701, overlap 616694 AATCCAGTTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 599 617399 - 617423 + r 71 -5.7 -4.45544 | TTCTTACCTCCCCGG CCACCAAAG TTTCATT CATTGGTGG TTTTAATTAATCGGG RBE_0557 618300 - 617866 - | hypothetical protein TERM 600 618533 - 618518 - H 74 -6.2 -4.37502 | opp_overlap 618507 ACGAGCATACTAAAA TGCTTT AAAA AAAGCA AGAATATACCTAGAT TERM 601 618759 - 618746 - H 70 -3.9 -5.11063 | ATTATGGAAGAAAAA TAGAT ATGA ATCTA CAAACTATTTCTGAG RBE_0558 619001 - 619186 + | hypothetical protein RBE_0559 619423 - 619211 - | hypothetical protein def 619776 - 620303 + | peptide deformylase fmt 620300 - 621214 + | methionyl-tRNA formyltransferase TERM 602 621791 - 621820 + G 72 -8.7 -2.99762 | opp_overlap 621814, overlap 621790 621814 ACTTAATTGTCCCAT CTGTACCGTTTAT TCCT GTAAAAGGTACAG CTTTACCTTTTTGGT RBE_0562 621220 - 622290 + | capsular polysaccharide biosynthesis protein n2B 623339 - 622302 - | putative ATPase n2B TERM 603 623871 - 623857 - gR 72 -2.8 -5.46129 | GAAGAAATCAAAAAA GGGATA TAT TATGCC CGTAAATATCACGGC RBE_0565 625057 - 624359 - | hypothetical protein spoT1 623731 - 624492 + | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 604 624641 - 624626 - GT 76 -7.6 -3.95674 | overlap 624631 AAAATGTTTAAAGAA GATAGG TACG CCTATC ATACGACTAGTACCA RBE_0566 625714 - 625079 - | MFS-type transporter TERM 605 625779 - 625797 + r 85 -4.6 -5.65927 | opp_overlap 625779 AAAAGTCAATAGGAA TTTTTACC GGA GGTTAAAA TTTTTTATTTAGATC TERM 606 625852 - 625871 + r 71 -2.2 -5.42862 | AAAATAATGAAGAGT TTTGTATA TTCG TATACCAA TTTTTTTAGGAATAT glmU 626913 - 626116 - | UDP-N-acetylglucosamine pyrophosphorylase RBE_0568 627601 - 626840 - | hypothetical protein rpmJ 627749 - 627624 - | 50S ribosomal protein L36 RBE_0570 629857 - 627830 - | hypothetical protein TERM 607 628842 - 628859 + g 70 -4.2 -4.99568 | overlap 628854 ACTTTTTTTGCTATT TCTTTC ATATTG GAAAGA TTTTCTTTAATATTA TERM 608 629850 - 629867 + g 88 -3.4 -5.95539 | GTATCTTTTATAACT GTTAGC ATTTGA GCTAGC TTTTTTTCTTTAAAG TERM 609 630161 - 630177 + H 71 -2.3 -5.42862 | TTTTTGTTAATAATG TAGTTTA AAG TGAGCTA TTTTTTTAAAAATGT TERM 610 630215 - 630227 + H 78 -4.1 -5.46657 | opp_overlap 630215 ATACGAAATAAATTA CCATG TTT TATGG TTTTTTCTTGACATA TERM 611 630308 - 630278 - g 100 -11.4 -4.84359 | opp_overlap 630282 630287, overlap 630279 630282 630287 GTACCTTTACAAAAA TTAACAAAACCATA TTT TATGGTTTTGTTAC TAAGTTTAATTATAA TERM 612 630307 - 630279 - g 100 -14.9 -3.50133 | opp_overlap 630282 630287, overlap 630278 630282 630287 TACCTTTACAAAAAT TAACAAAACCATA TTT TATGGTTTTGTTA CTAAGTTTAATTATA TERM 613 630304 - 630282 - g 100 -12.2 -3.88001 | opp_overlap 630282 630287, overlap 630279 630278 630287 CTTTACAAAAATTAA CAAAACCATA TTT TATGGTTTTG TTACTAAGTTTAATT TERM 614 630282 - 630304 + G 90 -12.2 -3.26204 | opp_overlap 630282 630279 630278 630287, overlap 630287 CTTTACAAAAATTAA CAAAACCATA TTT TATGGTTTTG TTACTAAGTTTAATT TERM 615 630299 - 630287 - g 80 -6.3 -4.93177 | opp_overlap 630282 630287, overlap 630282 630279 630278 CAAAAATTAACAAAA CCATA TTT TATGG TTTTGTTACTAAGTT TERM 616 630287 - 630299 + G 76 -6.3 -4.731 | opp_overlap 630287 630282 630279 630278, overlap 630282 CAAAAATTAACAAAA CCATA TTT TATGG TTTTGTTACTAAGTT RBE_0571 630217 - 630891 + | hypothetical protein RBE_0572 630891 - 631463 + | hypothetical protein TERM 617 631479 - 631527 + F 85 -10.7 -3.11962 | opp_overlap 631464, overlap 631484 TAATAATTAAAATTA TTAAATGTCATAACTTTTTTTGT CTT ATAAAGAGAGTTATGGCATTTTA CTTTATGTCTTAAAA TERM 618 631484 - 631522 + F 100 -10.6 -4.66057 | overlap 631479 ATTAAAATTATTAAA TGTCATAACTTTTTTTGT CTT ATAAAGAGAGTTATGGCA TTTTACTTTATGTCT TERM 619 631641 - 631617 - f 81 -7.3 -4.59773 | opp_overlap 631616 631615 631623 TTGCATTTCCAAAAA TTAATACCATA TTT TGTGGTATTAA AATTTAAACTTAATT TERM 620 632243 - 632285 + F 74 -8.1 -3.6053 | opp_overlap 632250 632253, overlap 632244 632253 AATTATTTAGTCTTT TGTAATATAACTTTTCT TGCTTAATT AGAAAAGTTATGTTACG TTAATTTATCCAAAA TERM 621 632244 - 632284 + F 74 -9.4 -2.75997 | opp_overlap 632250 632253, overlap 632243 632253 ATTATTTAGTCTTTT GTAATATAACTTTTCT TGCTTAATT AGAAAAGTTATGTTAC GTTAATTTATCCAAA mltE2 632323 - 633024 + | soluble lytic murein transglycosylase and related regulatory proteins RBE_0574 633029 - 633532 + | hypothetical protein RBE_0575 633607 - 634056 + | hypothetical protein RBE_0576 634260 - 634649 + | hypothetical protein TERM 622 634701 - 634688 - f 71 -4.5 -4.8277 | opp_overlap 634688 AAATATAAAAAATAA CCGCA ATAA TGCAG TAGTTGGAATTAGTA RBE_0577 634767 - 635447 + | hypothetical protein lpdA2 635655 - 637034 + | dihydrolipoamide dehydrogenase mltE1 637334 - 639295 + | soluble lytic murein transglycosylase precursor RBE_0580 639590 - 640111 + | hypothetical protein TERM 623 640199 - 640229 + F 72 -6.4 -4.33785 | opp_overlap 640206, overlap 640206 ATTCACAGGATCCAG TTAAAAATACTAGT AAA ATTAGTATTTTTTA TTATTTTCTAGATCT TERM 624 640206 - 640222 + F 90 -4.5 -5.77677 | opp_overlap 640206, overlap 640199 GGATCCAGTTAAAAA TACTAGT AAA ATTAGTA TTTTTTATTATTTTC mccF 640349 - 641308 + | microcin C7 self-immunity protein RBE_0582 641410 - 641682 + | hypothetical protein RBE_0583 641675 - 641974 + | hypothetical protein RBE_0584 644736 - 642238 - | endonuclease TERM 625 642841 - 642855 + g 72 -8.6 -3.15427 | opp_overlap 642830 642848, overlap 642848 ATTATTGCCAATATT CAGCAA AGC TTGCTG TTGATCAAGCATATT TERM 626 643148 - 643128 - G 75 -9.8 -2.92921 | opp_overlap 643124 643123, overlap 643130 ATATAACTCCAGAGA TACCGCAA TCAAG TTGCGGTA TGACACTTTTATTCG TERM 627 643146 - 643130 - G 70 -8 -3.01261 | opp_overlap 643124 643123, overlap 643128 ATAACTCCAGAGATA CCGCAA TCAAG TTGCGG TATGACACTTTTATT TERM 628 644091 - 644118 + g 74 -8.6 -3.23768 | overlap 644088 644088 644114 CATAAATATCCGTAG GCTCATAATAAT ATAT GTTATTGTGAGC TAGTTTTATCTCATT RBE_0585 644851 - 645345 + | ankyrin repeat-containing protein TERM 629 645430 - 645414 - g 72 -3.7 -5.1848 | AATTAATTCAAAAAA CTTTAGT ATT ACTTAAG CCGGAAGAAATTATT RBE_0586 645359 - 646909 + | ankyrin repeat-containing protein TERM 630 646959 - 646925 - T 100 -13.8 -2.83409 | opp_overlap 646925, overlap 646916 TATTAAGCTAGTATA GCTAGTACGAAATATA AAA TTTATCTCGTACTAGC TTTAACAAATTCTTT TERM 631 646925 - 646959 + T 93 -11.6 -3.59649 | opp_overlap 646916 646925 TATTAAGCTAGTATA GCTAGTACGAAATATA AAA TTTATCTCGTACTAGC TTTAACAAATTCTTT RBE_0587 647547 - 647014 - | hypothetical protein RBE_0588 649916 - 647748 - | hypothetical protein TERM 632 649681 - 649702 + g 79 -2.4 -5.88471 | ACAAAAAATTTCATA TTCTTATT TGTATT AATAGGAA TTTTTTTTACTGCTG TERM 633 650926 - 650914 - g 88 -6.3 -5.43553 | AGTTAAAAAAGAAAA TTCTG ATA CAGAA GATGATTCAGTTACA RBE_0589 650195 - 651247 + | ankyrin repeat-containing protein TERM 634 651414 - 651378 - T 85 -8.3 -4.47183 | opp_overlap 651388, overlap 651381 651382 651388 CAGTATTCAAAGAAA CGACTAAAAATATCAAT AAT ATTGATATTTTTAACTG GACCCCGTGAACAAG TERM 635 651411 - 651381 - T 85 -10.8 -3.19523 | opp_overlap 651388, overlap 651378 651382 651388 TATTCAAAGAAACGA CTAAAAATATCAAT AAT ATTGATATTTTTAA CTGGACCCCGTGAAC TERM 636 651410 - 651382 - T 89 -12.1 -2.50991 | opp_overlap 651388, overlap 651381 651378 651388 ATTCAAAGAAACGAC TAAAAATATCAAT AAT ATTGATATTTTTA ACTGGACCCCGTGAA TERM 637 651404 - 651388 - T 82 -6.7 -4.85267 | opp_overlap 651388, overlap 651382 651381 651378 AGAAACGACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGACCC TERM 638 651388 - 651404 + T 78 -6.7 -4.65895 | opp_overlap 651388 651382 651381 651378 AGAAACGACTAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGACCC TERM 639 651441 - 651429 - T 72 -7.7 -3.62046 | GGACCCCGTGAACAA GTCAC GGG GTGAC AGAGAAAAAATCGAT groEL 653169 - 651517 - | chaperonin GroEL TERM 640 652674 - 652685 + g 72 -5.8 -4.39002 | TGCCAACTTCTTCCA TCGC TTTA GCGA TTTTCTCACCAATTT groES 653483 - 653196 - | co-chaperonin GroES TERM 641 653609 - 653635 + H 78 -3.1 -5.57396 | AATTTATTTGCTTAA TTACTTGAGAT TTAAT ATTGCAAGTAA TTTTTTATTAATTAT spoT12 653842 - 654267 + | guanosine polyphosphate pyrophosphohydrolase/synthetase spoT19 654992 - 654543 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 642 654667 - 654637 - G 72 -9.2 -2.62515 | opp_overlap 654637 AAGCGTTCTACATTA TCAGCAATATCTTT ATC AAAAATTTTGCTGA TATCCTCATGTGTTA RBE_0594 655516 - 655776 + | hypothetical protein RBE_0595 656370 - 657206 + | putative chitinase TERM 643 657293 - 657311 + F 83 -10.4 -3.36557 | opp_overlap 657282 ATTAGCTAGCCGTAA TGCCTTAA ATC TTAAGGCA TTACTTCCCCTCCTT TERM 644 657328 - 657362 + F 100 -13.2 -5.44119 | opp_overlap 657338 657340, overlap 657329 TACTTCCCCTCCTTT TTTTCAGAGATAGTAA TCC TTACTATTTCTGAAAG TTTTTTTCAAATAAC TERM 645 657329 - 657361 + F 100 -14.5 -3.85748 | opp_overlap 657338 657340, overlap 657328 ACTTCCCCTCCTTTT TTTCAGAGATAGTAA TCC TTACTATTTCTGAAA GTTTTTTTCAAATAA TERM 646 657639 - 657657 + F 70 -4 -4.99035 | opp_overlap 657633 657621, overlap 657624 657622 TTTTATATATAAAAA TAAATTTA AAT TAAGTTTA TTTTTATATAAATAC TERM 647 657660 - 657685 + F 90 -7.9 -5.27477 | opp_overlap 657633 657621 657676, overlap 657624 657622 TAAATTAAGTTTATT TTTATATAAAT ACTA ATTTATATAAA TTTTTTAATTCAAAT RBE_0596 657713 - 658021 + | hypothetical protein TERM 648 658106 - 658078 - T 100 -12.1 -4.7878 | opp_overlap 658084, overlap 658084 TATCCAGAAAACAAA TAAAAATATCAAT AAT ATTGATATTTTTA ACTGGATCCCGTGAA TERM 649 658100 - 658084 - T 90 -6.7 -5.59962 | opp_overlap 658084, overlap 658078 GAAAACAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC TERM 650 658084 - 658100 + T 78 -6.7 -4.67353 | opp_overlap 658084 658078 GAAAACAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC TERM 651 658385 - 658424 + T 71 -8.8 -2.80975 | opp_overlap 658380, overlap 658383 658380 658384 TATCAATAAACTTCC TTTCTTTGAAAAGTAGTA TTCA TACTCCTTTCCAAAGAAG CTTTAAATGATGGGT TERM 652 658475 - 658435 - T 72 -8.6 -2.92935 | gap 1, opp_overlap 658436 658437 658438, overlap 658446 658454 AGAAGCTTTAAATGA TGGGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACA-A TTTTAATTTATATAT TERM 653 658436 - 658475 + T 83 -8 -4.66057 | opp_overlap 658435 658446 658454, overlap 658437 658438 GAAGCTTTAAATGAT GGGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACAA TTTTAATTTATATAT TERM 654 658437 - 658474 + T 93 -11.5 -3.38007 | opp_overlap 658435 658446 658454, overlap 658436 658438 AAGCTTTAAATGATG GGTATACAAGGTGAAAA GCGG TTTCCACCTTGTATACA ATTTTAATTTATATA TERM 655 658438 - 658473 + T 100 -15 -2.6172 | opp_overlap 658435 658446 658454, overlap 658437 658436 AGCTTTAAATGATGG GTATACAAGGTGAAAA GCGG TTTCCACCTTGTATAC AATTTTAATTTATAT RBE_0597 659349 - 658501 - | hypothetical protein prfB 660623 - 659516 - | peptide chain release factor 2 TERM 656 660397 - 660411 + g 78 -5.8 -4.78237 | GCTCTAATGCATCTT TTAGAT TAG ATCTAA TTTTATTATAAGCTC RBE_0599 660883 - 661533 + | GTP-binding protein LepA RBE_0600 661490 - 662686 + | GTP-binding protein LepA RBE_0601 663998 - 662898 - | ankyrin repeat-containing protein TERM 657 663819 - 663835 + g 93 -6.7 -5.36314 | ATCAACTTTTTTTGC TAATAAC TCT GTTATTA TTTTTTCATCTTTTA TERM 658 664056 - 664001 - R 95 -11.7 -3.2963 | opp_overlap 664004, overlap 664004 AGGATTTTTTCATAA TAATTTACCTTAATTAATTTATAGC GGGCGT ACTATAAAGTAATAAAGGTAAATTA TCAATATAAAATATT TERM 659 664053 - 664004 - R 80 -9 -3.79113 | opp_overlap 664004, overlap 664001 ATTTTTTCATAATAA TTTACCTTAATTAATTTATAGC GGGCGT ACTATAAAGTAATAAAGGTAAA TTATCAATATAAAAT TERM 660 664004 - 664053 + r 73 -8.3 -3.39505 | opp_overlap 664004 664001 ATTTTTTCATAATAA TTTACCTTAATTAATTTATAG CGGGCGTA CTATAAAGTAATAAAGGTAAA TTATCAATATAAAAT ileS 667422 - 664096 - | isoleucyl-tRNA synthetase TERM 661 666383 - 666414 + g 71 -6.6 -4.11664 | AAATAGTCAAATAGC GGCTTATAGCTTAA TCCT TGAAGCTCTGAGCC TTTAATTATTGTGAA TERM 662 667538 - 667568 + H 84 -8.6 -4.33182 | opp_overlap 667545, overlap 667545 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 663 667545 - 667561 + H 95 -6.7 -5.77677 | opp_overlap 667545, overlap 667538 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 664 667561 - 667545 - H 78 -6.7 -4.67755 | opp_overlap 667538 667545 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC RBE_0603 667700 - 668365 + | putative integral membrane protein RBE_0604 668745 - 669137 + | hypothetical protein perM 670198 - 669143 - | permease PerM-like protein TERM 665 670126 - 670104 - G 74 -5.7 -4.67256 | opp_overlap 670104 TAAGAAATTATAAAA GCAATAAAA AATGG TCTTATTGC TTCTGAAATTAGCAT grpE 670878 - 670348 - | GrpE protein rph 671027 - 671746 + | ribonuclease PH tlyA 671746 - 672495 + | hemolysin A RBE_0609 672902 - 672492 - | putative transcriptional regulator TERM 666 672902 - 672912 + g 72 -2.6 -5.48063 | AACTTGTTAACTGCA TAAA AAT TTTA TTTTTTATCTTGAAT TERM 667 672998 - 672950 - H 93 -11.5 -3.56854 | opp_overlap 672955 672965, overlap 672951 AAAACATTTATATAA GTCTATATGTTATAATATGTATT TTA AATACATATTATAACATATTAAT AATTGTAAACAAGGA TERM 668 672997 - 672951 - H 100 -15 -2.73028 | opp_overlap 672955 672965, overlap 672950 AAACATTTATATAAG TCTATATGTTATAATATGTATT TTA AATACATATTATAACATATTAA TAATTGTAAACAAGG TERM 669 672955 - 672993 + H 100 -18 -3.30474 | opp_overlap 672951 672950, overlap 672965 ATTTATATAAGTCTA TATGTTATAATATGTATT TTA AATACATATTATAACATA TTAATAATTGTAAAC RBE_0610 673014 - 674261 + | hypothetical protein TERM 670 674349 - 674378 + F 80 -10.1 -3.37464 | opp_overlap 674356, overlap 674356 TACAATATTGGAATT AAAAAAAGGTGGG TTAT CCCGCCTTTTTTG TTATAAAATTGATAA TERM 671 674371 - 674356 - f 88 -6 -5.63103 | opp_overlap 674349 674356 TTGGAATTAAAAAAA GGTGGG TTAT CCCGCC TTTTTTGTTATAAAA TERM 672 674356 - 674371 + F 95 -8.2 -5.55769 | opp_overlap 674356, overlap 674349 TTGGAATTAAAAAAA GGTGGG TTAT CCCGCC TTTTTTGTTATAAAA RBE_0611 674357 - 674899 + | hypothetical protein nusA 674908 - 676410 + | transcription elongation factor NusA TERM 673 676483 - 676520 + F 72 -4.5 -4.89852 | gap 1, overlap 676494 TGTACCTGCGAGGTC CAGCTAAAAAATACTAGT GGT GTTAGTATTTTTTA-TTG TTTTTCTGGATCTAG TERM 674 676494 - 676510 + F 80 -2.3 -5.80727 | overlap 676483 GGTCCAGCTAAAAAA TACTAGT GGT GTTAGTA TTTTTTATTGTTTTT TERM 675 678539 - 678523 - g 70 -8.1 -3.09766 | opp_overlap 678512 678520, overlap 678512 678520 AAAATTAAAGAATTA CCTTTAA TTA TTAAAGG CGATGTTCATGGTTC infB 676639 - 679125 + | translation initiation factor IF-2 TERM 676 679310 - 679326 + F 95 -6.7 -5.77677 | opp_overlap 679310 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 677 679326 - 679310 - f 83 -6.7 -5.09895 | opp_overlap 679310 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 678 680723 - 680735 + G 88 -9.1 -4.25104 | GGGTTATGATAGTTG CCGGA AAA TCCGG TTTTGATAAAAAAGA TERM 679 681013 - 681031 + G 79 -8.2 -4.12532 | overlap 681017 GTGATGAATAAGCTT CAAATGGA TAT TCCGTTTG TTTGTATGTCAAAAG uvrC 679477 - 681384 + | excinuclease ABC subunit C RBE_0615 683087 - 681582 - | hypothetical protein TERM 680 682886 - 682909 + g 77 -8.8 -3.68569 | opp_overlap 682870, overlap 682870 CATATTTAGCCATAT GCGTTGCTGG TAAG CTAGCTACGC TTGTTAAATCAGTCG TERM 681 683840 - 683855 + G 71 -3.2 -5.30686 | opp_overlap 683840 GGATATAACTAATAA CGATAG CGGT CTAACG TTTTTTGTAGATATT TERM 682 684996 - 685012 + G 83 -6.7 -4.91109 | ATAACAAGCTGTTAT GATATTT GTA AAATATC TTTTTCTGCTGGAAA RBE_0616 683316 - 685130 + | hypothetical protein RBE_0617 685617 - 685360 - | transposase RBE_0618 686117 - 685656 - | leucine-rich repeat-containing protein RBE_0619 686683 - 686135 - | hypothetical protein TERM 683 687140 - 687112 - R 100 -12.1 -4.34789 | opp_overlap 687116, overlap 687116 CAAGCTATAAAACAA TAAATGAATTATT AAA AATAATTCATTTA GCTAAAATTCAAACA TERM 684 687136 - 687116 - R 87 -8.5 -4.72617 | opp_overlap 687116, overlap 687112 CTATAAAACAATAAA TGAATTATT AAA AATAATTCA TTTAGCTAAAATTCA TERM 685 687116 - 687136 + r 74 -8.5 -3.66874 | opp_overlap 687112 687116 CTATAAAACAATAAA TGAATTATT AAA AATAATTCA TTTAGCTAAAATTCA RBE_0620 687868 - 687695 - | hypothetical protein yhbH 688446 - 687868 - | putative sigma(54) modulation protein TERM 686 688539 - 688486 - R 100 -13.7 -3.83154 | gap 1, opp_overlap 688474 688492 688497, overlap 688474 GAACTATAACGTAAA TATTAGTTATAGTGTATAGATGTTAC CTA GTAACATCTATACACT-TAATTTATA TTTAGCGTAATTTCA TERM 687 688492 - 688533 + r 100 -17.1 -4.33928 | gap 1, opp_overlap 688474 688486, overlap 688474 688497 TAACGTAAATATTAG TTATAGTGTATAGATGTTAC CTA GTAACATCTATACACT-TAA TTTATATTTAGCGTA TERM 688 688497 - 688529 + r 100 -19.5 -3.72621 | opp_overlap 688486, overlap 688492 TAAATATTAGTTATA GTGTATAGATGTTAC CTA GTAACATCTATACAC TTAATTTATATTTAG RBE_0622 688876 - 688541 - | hypothetical protein TERM 689 689773 - 689720 - R 86 -10.1 -3.83026 | gap 1, opp_overlap 689720 689734, overlap 689722 GGTGCTTATATTAAA TATTTTAG-TATACAGCAAAAGTTTA TAA TAATCTTCTGCTATATATCTAAAACA TTACTGATTTTTATT TERM 690 689771 - 689722 - R 83 -10.5 -3.5032 | gap 1, opp_overlap 689720 689734, overlap 689720 TGCTTATATTAAATA TTTTAG-TATACAGCAAAAGTTTA TAA TAATCTTCTGCTATATATCTAAAA CATTACTGATTTTTA RBE_0623 690541 - 689789 - | ankyrin repeat-containing protein TERM 691 690924 - 690912 - H 81 -9.1 -3.58343 | opp_overlap 690911 690910 GCGAGGAGTGGCAAA GCCAC GAT GTGGC AATCTTATTAAACAT RBE_0624 691016 - 691282 + | putative monovalent cation/H+ antiporter subunit F TERM 692 691424 - 691438 + GF 72 -2.8 -5.48063 | overlap 691425 AACCACTGCTTTGAC GCCTTA TTC TAAGGA TTTTTTATCTTCCAT ubiH 691248 - 692396 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 693 692544 - 692521 - g 74 -6 -4.67943 | GGTTAATATACAAAA TCCTGAACCT GTAC AAGATCAGGA ACAACCAGCACCCTC TERM 694 692819 - 692799 - g 71 -8.3 -3.32769 | opp_overlap 692793 692792, overlap 692792 GGTCCAAAGTAGCAA CAGCTGTTT CAA AAGCAGCTG ATCCACTTGATAAAG TERM 695 693115 - 693105 - g 74 -5.4 -4.77775 | overlap 693107 ACGTTACAAAAGAAA CACT TGA AGTG CAAGAGGACAAAAAA RBE_0626 692402 - 693511 + | hypothetical protein TERM 696 693519 - 693509 - f 76 -2.6 -5.61277 | GATAAAAAAATAAAA TAAA TGC TTTA AAACTATCTGCTGGA RBE_0627 693598 - 694017 + | hypothetical protein comF1 694018 - 694458 + | competence protein F RBE_0629 695287 - 694523 - | hypothetical protein TERM 697 695079 - 695100 + g 77 -3.1 -5.65496 | TCCTTGTTAAATTCG TTTCTATAA ATCA TTATAGCAA TTTTTCTTTTTAGTG RBE_0630 696140 - 695679 - | hypothetical protein TERM 698 696306 - 696278 - R 100 -10.6 -4.73105 | opp_overlap 696285, overlap 696285 ATCTAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA GCTGGATTGCTTCGT TERM 699 696299 - 696285 - R 88 -4.3 -5.80727 | opp_overlap 696285, overlap 696278 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTAGCTGGATT TERM 700 696285 - 696299 + r 72 -4.3 -5.10497 | opp_overlap 696278 696285 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTAGCTGGATT hemA 697680 - 696436 - | 5-aminolevulinate synthase TERM 701 697945 - 697957 + r 80 -6.3 -4.8667 | opp_overlap 697945 CTAAATAATTTTAAA GCTAT AAT ATAGC TTTTTGTACAATATC htpG 699811 - 697946 - | heat shock protein 90 TERM 702 698050 - 698066 + g 71 -2.3 -5.39905 | GATCAAATATTAACT TAACTAA CTC TTCGTTA TTTTTATTATTTGCT TERM 703 698140 - 698157 + g 75 -4.9 -5.05606 | TTAACTCTAGATTTT TAGCAGA AGCA TTTGCTA TTTGTTTTTGTTCAA TERM 704 699748 - 699727 - G 93 -8.9 -4.83169 | ACTCCCGCATAAAAA TCTCTTTAT TACT ATAAAGAGA GTGAATCATTAAATT TERM 705 699940 - 699916 - R 93 -11.4 -3.48276 | overlap 699918 CGGTTTGTGATACAA GACCCCGTGG TCAAG CCACGGGGTG ACACCAATGTAACAA TERM 706 699938 - 699918 - R 100 -14 -3.31726 | overlap 699916 GTTTGTGATACAAGA CCCCGTGG TCAAG CCACGGGG TGACACCAATGTAAC RBE_0633 700278 - 699964 - | hypothetical protein TERM 707 702334 - 702322 - g 75 -4.9 -5.04377 | overlap 702331 TTAAAAGAAAATAAA TTACT TAA AGTAA AAGATTATCTTAATT RBE_0634 700771 - 704181 + | TPR repeat-containing protein RBE_0635 706949 - 704397 - | hypothetical protein TERM 708 705278 - 705294 + g 71 -6.7 -4.11623 | opp_overlap 705277 705280 CATAATTATTAAATC TATCAAT AAA ATTGATA TTTAGTTTGCTAATA RBE_0636 707638 - 707201 - | hypothetical protein TERM 709 707790 - 707824 + H 84 -6.7 -5.31456 | opp_overlap 707792 707800, overlap 707793 707800 ATTGACGAAGCAATC CAGTAAAAAATGCTA ACTTA TAGCATTTTTTATTA TTTTTTCTGGATTGC TERM 710 707793 - 707821 + H 100 -10.6 -4.73105 | opp_overlap 707792 707800, overlap 707790 707800 GACGAAGCAATCCAG TAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 711 707814 - 707800 - gH 77 -4.3 -5.18357 | opp_overlap 707800 707793 707790, overlap 707792 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 712 707800 - 707814 + GH 88 -4.3 -5.80727 | opp_overlap 707792 707800, overlap 707793 707790 CAATCCAGTAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 713 707901 - 707891 - gH 75 -8.2 -3.66999 | ATCCACGCAGGCAAA GCCG CCA CGGC ATGACAATGTATTAT RBE_0637 707799 - 708809 + | hypothetical protein RBE_0638 708772 - 709620 + | hypothetical protein TERM 714 710313 - 710301 - g 74 -6.3 -4.45117 | TAGATGGCAAAGAAA TTACC TAT GGTAA GAAAGACTTTGCCAA cysQ 709622 - 710383 + | 3'(2'),5'-bisphosphate nucleotidase TERM 715 710493 - 710509 + T 95 -6.7 -5.72254 | opp_overlap 710493 GAGCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTCC TERM 716 710509 - 710493 - T 83 -6.7 -5.09895 | opp_overlap 710493 GAGCCAGCTAAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTCC RBE_0640 711827 - 710685 - | hypothetical protein RBE_0641 711995 - 712261 + | hypothetical protein TERM 717 712296 - 712276 - T 86 -9.8 -3.73953 | opp_overlap 712276 712273 712282, overlap 712288 ATTAGGTGTACTAAA TGCCATGA TTAAG TCATGGCA TAACTTTATCTATTT TERM 718 712276 - 712296 + T 78 -10.5 -2.76661 | opp_overlap 712276 712288, overlap 712273 712282 ATTAGGTGTACTAAA TGCCATGAT TAA GTCATGGCA TAACTTTATCTATTT RBE_0642 712706 - 712302 - | hypothetical protein TERM 719 712468 - 712496 + g 81 -4 -5.54894 | AATTCACAATCGGCA TCACGAAATTTA ATCCA TAAATTTTGGGA TTTTTTTAATAAATT RBE_0643 713408 - 712755 - | variable membrane protein-like protein TERM 720 713532 - 713550 + r 71 -3.2 -5.26907 | opp_overlap 713532 ATAATTTTTATTTAA TATACG AGGGTTG CGTATA TTTTCTTTTCTATTA mdh 714959 - 714015 - | malate dehydrogenase RBE_0645 715393 - 715100 - | putative transcriptional regulator RBE_0646 715698 - 715390 - | putative transcriptional regulator RBE_0647 718925 - 715800 - | RND family efflux transporter TERM 721 717383 - 717407 + g 74 -8.6 -3.29461 | overlap 717385 TAAGGGGAATTTTGT CATACCGTGG CTTGA CCACGGTATC TTGTGAAGCAGCTTG TERM 722 717385 - 717405 + g 85 -11.2 -3.21395 | overlap 717383 AGGGGAATTTTGTCA TACCGTGG CTTGA CCACGGTA TCTTGTGAAGCAGCT TERM 723 717433 - 717474 + g 77 -8.7 -3.59935 | gap 1, opp_overlap 717431, overlap 717433 717431 GCTTGTGATATTATG C-CTCCTGAGATCCCGCAGT CAA GCTGCGGGATGACAGTAGAG TGTTTCTCATCCTTC TERM 724 717433 - 717473 + g 72 -8.9 -2.75238 | opp_overlap 717431, overlap 717431 717433 GCTTGTGATATTATG CCTCCTGAGATCCCGCAGT CAA GCTGCGGGATGACAGTAGA GTGTTTCTCATCCTT RBE_0648 720047 - 719082 - | RND family transporter membrane-fusion protein TERM 725 719508 - 719494 - GR 75 -7.2 -4.08546 | opp_overlap 719493 719494 ACTATTAATGATAAA TCAGAA TTT TTCTGA GATTTATTGATTTTA RBE_0649 720264 - 720016 - | RND family transporter membrane-fusion protein TERM 726 720339 - 720355 + r 90 -4.5 -5.77677 | opp_overlap 720339 720341, overlap 720341 GATCCAGCTAAAAAA TACTAAT AAA ATTAGTG TTTTTTATTATTTTC RBE_0650 721647 - 720481 - | RND efflux system, outer membrane protein RBE_0651 723003 - 721981 - | glycosyltransferase dapF 723108 - 723917 + | diaminopimelate epimerase RBE_0653 723910 - 725157 + | MiaB-like tRNA modifying enzyme TERM 727 725279 - 725310 + F 76 -9.5 -3.05844 | gap 1 TATTTGTATTTTTAA CTG-GATCCCGTGG ACAAG CCACGGGATGACAG TATTAACATAAGACA pheS 725335 - 726384 + | phenylalanyl-tRNA synthetase subunit alpha TERM 728 727308 - 727284 - g 84 -10 -3.494 | overlap 727269 727286 GAATCTGTTATACAA GATCCCGTGG TCAAG CCACGGGATG ACAATAGGGGATTTC TERM 729 727306 - 727286 - g 90 -12.6 -3.31905 | overlap 727269 727284 ATCTGTTATACAAGA TCCCGTGG TCAAG CCACGGGA TGACAATAGGGGATT TERM 730 727688 - 727672 - g 81 -2.9 -5.77853 | opp_overlap 727672, overlap 727659 AACCTGCAAAAAAAA CGTTGGA TTT TCCAGCA GGTTATCTAGAAAAA pheT 726381 - 728993 + | phenylalanyl-tRNA synthetase subunit beta dnaN 728998 - 730137 + | DNA polymerase III subunit beta RBE_0657 731497 - 730292 - | ATPase TERM 731 731538 - 731565 + r 80 -10 -3.26471 | opp_overlap 731553 731555, overlap 731546 TATTTTATAGCCCTA TATCGGATTAGT CAAG ACTATTCCGATA TTGATGTCGGAATGG RBE_0658 733220 - 731601 - | hypothetical protein TERM 732 731707 - 731726 + g 82 -6.4 -4.94902 | overlap 731705 ATTTTTACTGGAATT GCTTTTGC AATT GCTAAAGC TTTTTGTAATACTTC RBE_0659 733942 - 733364 - | hypothetical protein RBE_0660 734580 - 733996 - | hypothetical protein TERM 733 734300 - 734327 + g 75 -5 -5.06414 | gap 1 TAAACTTCCACGCAA GCTT-TAAGTTTC TCA GGAACTTGTAAGC TTTTTGTTACAGCAG TERM 734 734543 - 734531 - G 70 -4.1 -5.08824 | overlap 734502 TTTTTATCTAAAAAA TCCTC GAT GAGAA TTTTTTCCGAATCAC TERM 735 734992 - 735008 + H 75 -4.5 -5.07523 | AAAAAAATATCCTTA TTCATTG CTT TAATGAA TTTTATTTATATATA TERM 736 735956 - 735942 - g 77 -8.6 -3.73234 | overlap 735940 TAATTAATACAAACA CACCTA TTT TAGGTG AAGAACTCAAAAAAC TERM 737 736904 - 736875 - g 90 -5.7 -5.68438 | opp_overlap 736879 CTAGTAAAGAAAAAA CGCCTGTAGCTTA CATA TTAACCACAAGCG ATGATTTCTCATTTA TERM 738 740250 - 740234 - g 77 -8.1 -3.83816 | overlap 740224 740237 ATAAATGAAGCTAAA GAAGTTA ATT TAACTTC AACAAATAATGGCTT RBE_0661 735056 - 740740 + | large extracellular alpha-helical protein TERM 739 740731 - 740762 + F 89 -12 -2.83715 | opp_overlap 740735 740738, overlap 740730 740733 740735 740738 TATAGGTAGTATTAT TATAGAATAATTAA ATTA TTAATTATTCTATA TCTAATCATAATAAA TERM 740 740733 - 740760 + F 79 -10.2 -2.96692 | opp_overlap 740735 740738, overlap 740730 740731 740735 740738 TAGGTAGTATTATTA TAGAATAATTAA ATTA TTAATTATTCTA TATCTAATCATAATA TERM 741 740865 - 740889 + F 89 -11.7 -2.88215 | opp_overlap 740868, overlap 740860 740868 CTTGACTTTTTTCAA TAATTACCATA TTT TATGGTAATTA TCATATTTAGTGATA TERM 742 740868 - 740886 + F 77 -9 -3.57908 | opp_overlap 740868, overlap 740865 740860 GACTTTTTTCAATAA TTACCATA TTT TATGGTAA TTATCATATTTAGTG TERM 743 740886 - 740868 - f 77 -9 -3.61715 | opp_overlap 740868 740865 740860 GACTTTTTTCAATAA TTACCATA TTT TATGGTAA TTATCATATTTAGTG TERM 744 741411 - 741401 - g 82 -2.6 -5.95539 | TCTCAAATAAAAAAA TTAT TTA ATAA GGAACCTCTACCTTC TERM 745 742363 - 742353 - g 82 -2.6 -6.01187 | opp_overlap 742353 AACGAAATAAAAAAA TATT TAA AATA TTTGTTGAGACTTGT TERM 746 742843 - 742827 - g 72 -5.1 -4.78149 | opp_overlap 742827 742826 GCTATAATGTAAAAA CCCTAGT AGA ATTAGGG ATTTCTTTAGAAACA TERM 747 742930 - 742919 - g 70 -4.4 -4.79752 | opp_overlap 742919 742920, overlap 742920 GGTAACAATATAAAA CTCT TAAC AGAG TTAGGAATTTCTTTA TERM 748 743285 - 743307 + G 78 -9.2 -3.48807 | opp_overlap 743284 743287 GATCAAGAAATAACT GATATGCCTG TAA TAGGCGTATC TTCTGAATTTCCTAC RBE_0662 740933 - 743335 + | glutamine amidotransferase TERM 749 743345 - 743373 + F 87 -11.1 -3.26947 | opp_overlap 743345 GCCTAAAAAATATCA GCTGCTATCGGTT TTT AACTGGTAGTAGC TTCATCTGCCAATTA TERM 750 743550 - 743582 + G 73 -4.3 -5.00765 | gap 1, opp_overlap 743559 TTTGGGCAGTTTTTG CATTAGTAACCGGT AGCCAG ATCGGT-ACTAGTG TTTTTATACTTCCTT TERM 751 743744 - 743758 + G 77 -4.2 -5.4833 | opp_overlap 743739, overlap 743746 ATCCGTGAAAGCTTT GGCG AAAAAGC CGCC TTTTTTGTTGGCTGG potE 743516 - 744793 + | putrescine-ornithine antiporter TERM 752 745264 - 745250 - f 70 -4.2 -4.89009 | opp_overlap 745250 ACACGTAATCAAAAA GAAGCC ATA GGCTTA CTATCTATCGGTACA RBE_0664 745332 - 746129 + | MFS-type transporter RBE_0665 746567 - 746088 - | hypothetical protein def 746681 - 747268 + | polypeptide deformylase RBE_0667 747419 - 747691 + | hypothetical protein RBE_0668 747869 - 748153 + | hypothetical protein RBE_0669 748092 - 748361 + | hypothetical protein TERM 753 748431 - 748417 - T 74 -8.6 -3.31792 | opp_overlap 748409, overlap 748429 748430 GTATGACCCGTATAA CGGTTT AGC AAACCG CCGCCTTCGGCCACT RBE_0670 749788 - 748532 - | hypothetical protein TERM 754 748820 - 748841 + g 73 -7.5 -3.62522 | opp_overlap 748824, overlap 748824 GATGCGATCGGAGAT TAAAGATTT CACT AAATCTTTA TTATTGCAAGCATTC TERM 755 749387 - 749375 - G 76 -3.5 -5.32944 | opp_overlap 749375 TTTAGAATTAAAAAA TAATA AAT TATTA CCTTTTTCTCTAAGG fabD 750710 - 749772 - | malonyl CoA-acyl carrier protein transacylase RBE_0672 751731 - 752447 + | hypothetical protein RBE_0673 752470 - 752931 + | hypothetical protein RBE_0674 752991 - 753563 + | hypothetical protein rbn 754500 - 753655 - | putative ribonuclease BN hipB 754841 - 755254 + | putative transcriptional regulator TERM 756 755305 - 755252 - T 100 -13.7 -2.73177 | opp_overlap 755267, overlap 755249 755267 AATAATAATAACGCA TAAAAAATAAAAAAAGGATAAGATT GAAA ACTCTTATCCTTTTTTTATATTTCA TACCCTCAAATTACT TERM 757 755267 - 755290 + T 95 -6.8 -5.88197 | opp_overlap 755267 755252 755249 TAAAAAATAAAAAAA GGATAAGATT GAAA ACTCTTATCC TTTTTTTATATTTCA TERM 758 755290 - 755267 - T 95 -6.8 -6.28401 | opp_overlap 755267, overlap 755252 755249 TAAAAAATAAAAAAA GGATAAGATT GAAA ACTCTTATCC TTTTTTTATATTTCA RBE_0677 757490 - 755949 - | TPR repeat-containing protein TERM 759 757065 - 757078 + g 77 -3.9 -5.46657 | AATTAATGCATCCGC TAGAT CTTT ATCTA TTTTTTCTTCACCTA paaY 757794 - 758012 + | carbonic anhydrases/acetyltransferases, isoleucine patch superfamily protein glnA 759076 - 758255 - | glutamine synthetase RBE_0680 759075 - 759797 + | hypothetical protein TERM 760 760174 - 760154 - g 78 -6.9 -4.46072 | GGCAATAAAGATAAA TTACCTTGA TTA TCATGGTAA CAAACAGGAATTAGA def2 759807 - 760358 + | polypeptide deformylase RBE_0682 760535 - 760807 + | hypothetical protein RBE_0683 762121 - 760814 - | hypothetical protein RBE_0684 763609 - 762317 - | hypothetical protein TERM 761 763039 - 763051 + g 82 -7.7 -4.72846 | ATAATTTTTTTGTAA CTGCT TCT AGCAG TTTTTCAGTATATCC uvrD 765659 - 763698 - | DNA helicase II RBE_0686 766673 - 765717 - | transposase TERM 762 766853 - 766834 - R 75 -9.4 -3.01924 | opp_overlap 766826 766822 766834 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 763 766834 - 766853 + r 76 -9.4 -3.06087 | opp_overlap 766834, overlap 766826 766822 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 764 766987 - 766957 - R 84 -8.6 -4.33785 | opp_overlap 766964, overlap 766964 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGCTCTAGTTCAT TERM 765 766980 - 766964 - R 95 -6.7 -5.77677 | opp_overlap 766964, overlap 766957 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 766 766964 - 766980 + r 78 -6.7 -4.67755 | opp_overlap 766964 766957 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT lgtD 767957 - 767112 - | glycosyl transferase gcvT 768901 - 768080 - | glycine cleavage T-protein TERM 767 768173 - 768188 + g 70 -6.2 -4.2828 | TTTCTCTTCTTTAAC TAAAGC TATA GCTTTA TTTTGATAGCTGGAA TERM 768 768453 - 768475 + g 79 -5.1 -5.29385 | opp_overlap 768453 TCTATTATGGCAAAA TTATATTTA TCATC TAAATATAA TTTTTTACTTAGATT RBE_0689 768976 - 769806 + | hypothetical protein rnd 769819 - 770679 + | ribonuclease D RBE_0691 771418 - 770891 - | hypothetical protein RBE_0692 772233 - 771472 - | putative DNA alkylation repair protein dat 772663 - 772151 - | methylated-DNA--protein-cysteine methyltransferase TERM 769 772928 - 772893 - R 90 -7.9 -5.31456 | opp_overlap 772892 772891 772895 GCAATCCAGAAAAAA TAGTAAAAAAGTACT GATTTT AGTATTTTTTTACTA GATTGCTTCGTCAAA TERM 770 772895 - 772926 + r 70 -9 -2.61216 | opp_overlap 772893, overlap 772892 772891 AATCCAGAAAAAATA GTAAAAAAGTACTG ATTT TAGTATTTTTTTAC TAGATTGCTTCGTCA RBE_0694 773369 - 772926 - | F pilin acetylation protein TraX RBE_0695 773493 - 773332 - | F pilin acetylation protein TraX mviN 774997 - 773480 - | integral membrane protein MviN TERM 771 774761 - 774783 + g 100 -9.2 -5.32944 | opp_overlap 774759 ACCAGAAAATCTACC TGCTGCTTTC TTA GAAATCAGCA TTTTTTCATTATAAA TERM 772 775163 - 775187 + r 74 -8.6 -3.33162 | overlap 775161 775165 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 773 775165 - 775185 + r 93 -11.2 -3.23393 | overlap 775161 775163 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA TERM 774 775204 - 775241 + r 87 -8.5 -4.77157 | gap 1, opp_overlap 775215, overlap 775207 TGTGCCATAGAATGT GTCCTGAGATACTGCGGT CAA GCCGCAGTATGACAG-AC TTTTTCCTGGATTCC TERM 775 775207 - 775239 + r 85 -11.3 -2.6662 | opp_overlap 775215, overlap 775204 GCCATAGAATGTGTC CTGAGATACTGCGGT CAA GCCGCAGTATGACAG ACTTTTTCCTGGATT TERM 776 775231 - 775215 - R 74 -9.4 -2.87211 | opp_overlap 775207 775204 ATGTGTCCTGAGATA CTGCGG TCAAG CCGCAG TATGACAGACTTTTT ppa 775841 - 775314 - | inorganic pyrophosphatase TERM 777 775932 - 775956 + r 74 -8.6 -3.33162 | overlap 775930 775934 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 778 775934 - 775954 + r 93 -11.2 -3.23393 | overlap 775930 775932 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA ccmE 776432 - 776019 - | cytochrome c-type biogenesis protein CcmE RBE_0699 777149 - 776535 - | Sco2 protein precursor secD 778712 - 777168 - | preprotein translocase subunit SecD yajC 779136 - 778696 - | preprotein translocase subunit YajC RBE_0702 780494 - 779307 - | glycosyltransferase RBE_0703 780527 - 781327 + | putative hydrolase/acyltransferase RBE_0704 781431 - 782198 + | hypothetical protein TERM 779 782300 - 782289 - g 77 -3 -5.66338 | overlap 782297 AAACAGAAGAAAAAA TTAC AGGA GTAA AAGTTACTAAAGCAC RBE_0705 782207 - 783205 + | RND family efflux transporter MFP subunit RBE_0706 785279 - 783207 - | glycosyltransferase TERM 780 784997 - 784975 - G 74 -7 -4.29304 | opp_overlap 784975 784993, overlap 784978 TTAGGATAATATAAA TCATCATGGC TTA GCCATGAAAA ATATTTTCCTTTCAT TERM 781 784994 - 784978 - G 84 -10.9 -3.13369 | opp_overlap 784975 784993, overlap 784975 GGATAATATAAATCA TCATGGC TTA GCCATGA AAAATATTTTCCTTT RBE_0707 786539 - 785487 - | hypothetical protein TERM 782 786334 - 786348 + g 77 -4.2 -5.32699 | opp_overlap 786334 ATTATTATCGAATTA GTACCT GAT AGGTTC TTTTTTAATATTTCA rffE 787666 - 786533 - | UDP-N-acetylglucosamine 2-epimerase capD 788684 - 787659 - | putative nucleoside-diphosphate sugar epimerase CapD TERM 783 788718 - 788742 + r 81 -10 -3.48593 | overlap 788716 788720 788740 TTTTAAGTTAATTGT CACCCCGTGA CTTGA TCACGGGGTC TTGTATCACAGACTG TERM 784 788720 - 788740 + r 100 -12.6 -3.31726 | overlap 788716 788718 TTAAGTTAATTGTCA CCCCGTGA CTTGA TCACGGGG TCTTGTATCACAGAC TERM 785 788788 - 788768 - R 100 -16.9 -3.06162 | GACTGTATCCTAAGA TCCCGTGGC GGG GCCACGGGA TGACACACATCACCC RBE_0710 789652 - 788798 - | dTDP-4-dehydrorhamnose reductase TERM 786 789652 - 789662 + g 72 -2.6 -5.35224 | opp_overlap 789655, overlap 789655 AAATCAATATTTTCA TAAT AAA ATTA TTTTATTTTTATGGC gltX 791170 - 789833 - | glutamyl-tRNA synthetase TERM 787 791137 - 791115 - G 80 -10.6 -2.62184 | GCTGCTCTTATATTA CCGACATGTA ACA TACCTGTCGG TGATGGAGCAAATCG topA 793579 - 791177 - | DNA topoisomerase I RBE_0713 794321 - 793644 - | putative DNA processing protein DprA RBE_0714 794820 - 794566 - | putative DNA processing protein DprA tdpX1 795612 - 794980 - | thioredoxin peroxidase 1 hflC1 796626 - 795691 - | membrane protease subunit stomatin/prohibitin-like protein TERM 788 796725 - 796775 + r 70 -5.5 -4.20516 | gap 1, overlap 796727 796729 TTGCGAGGAGGCGAA GCCGACGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGCTCAC TTTGTTCGCTCGCAA TERM 789 796727 - 796774 + r 73 -8.7 -3.11988 | gap 2, overlap 796725 796729 GCGAGGAGGCGAAGC CGA-CGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGCTCA CTTTGTTCGCTCGCA TERM 790 796729 - 796771 + r 85 -11.5 -2.76539 | gap 1, overlap 796727 796725 GAGGAGGCGAAGCCG ACGTGGCAATCTCA-GGAGT CTAA ATTTCATGAGATTGCCACGC TCACTTTGTTCGCTC ispB 797804 - 796800 - | octaprenyl-diphosphate synthase RBE_0718 799453 - 797783 - | hypothetical protein TERM 791 799453 - 799471 + r 72 -7.6 -3.66148 | opp_overlap 799468, overlap 799451 TTAAAGTTTTTTTCA TTTCTTTA ATT TAAAGAAA TATTTAATTTCATTC RBE_0719 799748 - 799458 - | hypothetical protein RBE_0720 800170 - 799745 - | hypothetical protein TERM 792 799787 - 799800 + g 71 -3.1 -5.16472 | AAATGCTAAATCTAA CTCTT TATT AGGAG TTTTTTGAGATTTTT tlc3 801705 - 800191 - | ATP/ADP translocase rfaJ 803383 - 801791 - | lipopolysaccharide 1,2-glucosyltransferase RfaJ TERM 793 804652 - 804674 + G 71 -2.1 -5.34309 | opp_overlap 804656, overlap 804656 CAGGTTATATAGTAG TAAATTTTG GCTGG CAAAATTTC TTTTTATTTACTACT TERM 794 804656 - 804670 + G 71 -2.9 -5.12987 | opp_overlap 804656, overlap 804652 TTATATAGTAGTAAA TTTTG GCTGG CAAAA TTTCTTTTTATTTAC ampG1 803517 - 804749 + | AmpG RBE_0724 804746 - 805378 + | hypothetical protein lysE 805380 - 806018 + | lysine efflux permease TERM 795 806191 - 806211 + G 83 -11.2 -2.82834 | opp_overlap 806184, overlap 806187 806195 ATAAACAACTTGTCA TGCCGTGA CTTGA TCACGGCA TCTAGTAATAAGCTA TERM 796 806195 - 806245 + G 79 -10.5 -2.52676 | opp_overlap 806184, overlap 806187 806191 806212 ACAACTTGTCATGCC GTGACTTGATCACGGCATCTAGT AATAA GCTAGATTCTGTGGACAAGTCCC TAGATTACAAACATA RBE_0726 805996 - 806730 + | hypothetical protein RBE_0727 806714 - 807388 + | hypothetical protein TERM 797 807704 - 807687 - g 70 -6.2 -4.26881 | GGTGATAAAACTAAA GCAGGC TCTATT GCCCGC AAGAATTCATCTTGT RBE_0728 807381 - 808355 + | HemY-like protein TERM 798 808542 - 808532 - gf 70 -4 -4.95758 | AGGATATCAGAAAAA TTGA AAA TCAA TCAGAAAATGAATGG RBE_0729 808366 - 808623 + | hypothetical protein TERM 799 809044 - 809074 + GT 81 -7.1 -4.68593 | opp_overlap 809047, overlap 809047 TAGCAGTAAAATTGC AAATACTAATACT GTTGA AGTATTAGTATTA TTTTTAGATAATGAA TERM 800 809071 - 809047 - gT 80 -8.8 -3.77484 | opp_overlap 809044 809047 CAGTAAAATTGCAAA TACTAATACT GTTGA AGTATTAGTA TTATTTTTAGATAAT TERM 801 809047 - 809071 + GT 88 -8.8 -4.4521 | opp_overlap 809047, overlap 809044 CAGTAAAATTGCAAA TACTAATACT GTTGA AGTATTAGTA TTATTTTTAGATAAT TERM 802 809341 - 809323 - gT 71 -3.2 -5.28778 | AGTAGCTATAAAAAA TAATAATG TTT CAGTATTA AATCTTTTAGTAAAT RBE_0730 808577 - 809938 + | hypothetical protein TERM 803 809998 - 809976 - T 100 -10.6 -6.17268 | opp_overlap 809971 809976 809978 CTACAACAAAAAAAA TAGGAGCCGT TAC ATGGCTCCTA TATCATTCTTGCGTA TERM 804 809976 - 809998 + T 100 -12.8 -3.02459 | opp_overlap 809976, overlap 809971 809978 CTACAACAAAAAAAA TAGGAGCCGT TAC ATGGCTCCTA TATCATTCTTGCGTA TERM 805 809978 - 809996 + T 85 -11 -3.06171 | opp_overlap 809976, overlap 809976 809971 ACAACAAAAAAAATA GGAGCCGT TAC ATGGCTCC TATATCATTCTTGCG fni 811074 - 810046 - | isopentenyl pyrophosphate isomerase TERM 806 810238 - 810219 - G 70 -4.3 -4.87626 | CGGCAAGACCAAAAA TATCCGC TCCCAT GCGAATA GCTTTAGCCCCGTCA TERM 807 810804 - 810764 - G 80 -9.1 -3.70076 | overlap 810767 810788 GTAAATGTATCTAAA GTACTTGGTTCTGTAAGTA ATG TACGCATAGAACCAAGTCC CATAGCGATACCTGC TERM 808 810801 - 810767 - G 75 -9.4 -2.94888 | overlap 810764 810788 AATGTATCTAAAGTA CTTGGTTCTGTAAGTA ATG TACGCATAGAACCAAG TCCCATAGCGATACC nrdF 812648 - 811674 - | ribonucleotide-diphosphate reductase subunit beta TERM 809 811973 - 811957 - G 79 -8.1 -4.1196 | overlap 811946 AACGCATCTTCAAAA TGTACAA TAG TTGTACA AGCTTTATAGATACG TERM 810 812797 - 812770 - R 78 -10 -3.20858 | opp_overlap 812765 812786, overlap 812774 GAGCATAGCGACGAA GCAATCTCAGAA ACCC TTATGAGATTGC AACGCTCCTTGCAGT nrdA 814660 - 812837 - | ribonucleotide-diphosphate reductase subunit alpha TERM 811 813375 - 813391 + g 74 -7.3 -3.97413 | opp_overlap 813375, overlap 813373 813390 ATCACTGAAATTGAA GCAGTAG GAG CTATTGC TGTTTTATTACTAAA TERM 812 813535 - 813547 + g 71 -7.7 -3.47392 | opp_overlap 813535, overlap 813533 AAACCTTTGCCATAA CCGAT TCT ATCGG TACTTTTTTCATTTG TERM 813 814205 - 814182 - G 70 -8.2 -3.01924 | overlap 814184 814202 GAGCCTCGTCTAATA GACCCTTG AGAAATAG CAAGGGTC ATAGAATCCATTACC TERM 814 814240 - 814230 - G 71 -5.4 -4.66318 | opp_overlap 814219 ATTACCTTAATAAAA GGTA TAA TACC CGATGAATGCCCTTT RBE_0734 815368 - 814829 - | hypothetical protein himD 815704 - 815438 - | integration host factor beta-subunit sppA2 816593 - 815670 - | Signal peptide peptidase SppA, 36K type TERM 815 816687 - 816703 + r 90 -4.5 -5.77677 | opp_overlap 816687 GATCCAGTTAAAAAA TACTGAT AAA ATTAGTA TTTTTTATTATTTTC rho 818201 - 816852 - | transcription termination factor Rho TERM 816 817743 - 817761 + g 88 -9 -4.27211 | opp_overlap 817742 GACACGGTGATAAGC TTTTGAAG GAT CTTCAAAA TTTACTTTATTTACC dsbA 819359 - 818559 - | Thiol:disulfide interchange protein dsbA TERM 817 819498 - 819470 - R 77 -5.5 -4.87665 | CGGGATCCAGAAAAA CAATAAAAAATAT TAT ATATTTTTTCCTG AACCCCGTGAATAAA smpB 820000 - 819542 - | SsrA-binding protein dapA 820881 - 819997 - | dihydrodipicolinate synthase ilvE 821910 - 821041 - | branched-chain amino acid aminotransferase TERM 818 822070 - 822085 + H 71 -7.6 -3.39618 | overlap 822037 822069 GGACAAGCCACGGGA TGACAG AACA CTGTCA ATTTTTCAAATTAAA ompR 822110 - 822790 + | PetR RBE_0743 822765 - 823292 + | osmolarity sensor protein EnvZ RBE_0744 823330 - 824094 + | osmolarity sensor protein EnvZ uppS 824260 - 825054 + | undecaprenyl pyrophosphate synthetase TERM 819 825077 - 825062 - gf 82 -4.8 -5.48623 | AAAGATAAACAAAAA TCAAAT TTAT ATTTGA GGATACTATCAGGGA TERM 820 825081 - 825097 + GF 70 -8.1 -3.17956 | opp_overlap 825083, overlap 825091 ATTTATATTTGAGGA TACTATC AGG GATAGTA TTAGTACCATCATTT cdsA 825014 - 825709 + | phosphatidate cytidylyltransferase TERM 821 825811 - 825831 + G 71 -8.4 -3.36694 | overlap 825808 TTTCACTGCATTTAC GGCAATAA AGGAG TTATTGCC TATTTAAAAGTAAAT RBE_0747 825706 - 826032 + | septum formation initiator TERM 822 826208 - 826220 + G 71 -7.7 -3.543 | opp_overlap 826207 826208, overlap 826213 TTTAGTAACGGAAAT GGTGA TGC TCACC TTGTGCATTTTCTAA rnd2 826073 - 826684 + | ribonuclease D RBE_0749 827714 - 826896 - | hypothetical protein RBE_0750 827865 - 828188 + | Sodium/pantothenate symporter RBE_0751 828197 - 829243 + | Sodium/pantothenate symporter RBE_0752 830396 - 829230 - | Fic family protein TERM 823 830257 - 830267 + g 71 -5.4 -4.60041 | TTTAACTCTGCAAGT GCTA AGG TAGC TTTTTCAAGGTGAGT RBE_0753 831650 - 830556 - | Fic family protein TERM 824 831663 - 831709 + r 82 -6.2 -5.1963 | opp_overlap 831650 831662, overlap 831650 831664 CATGAGCTATAAATG TTTACTTTATAACTCATATTAT AGC ATATTTTGAGTTATAAAATAAG TTTTTATTACTTGGA TERM 825 831664 - 831708 + r 71 -7.5 -3.70694 | opp_overlap 831650 831662, overlap 831650 831663 ATGAGCTATAAATGT TTACTTTATAACTCATATTAT AGC ATATTTTGAGTTATAAAATAA GTTTTTATTACTTGG RBE_0754 832029 - 831763 - | hypothetical protein RBE_0755 832182 - 833093 + | hypothetical protein RBE_0756 833078 - 834799 + | glycosyltransferase RBE_0757 835329 - 834973 - | growth inhibitor RBE_0758 835549 - 835313 - | hypothetical protein RBE_0759 835701 - 836858 + | Phage portal protein RBE_0760 836855 - 837142 + | hypothetical protein TERM 826 838128 - 838107 - g 72 -7.3 -3.80114 | opp_overlap 838118, overlap 838119 CATTAATTTAGCAAA TGCAACAGC GAAT GTTGTTGCA ACAGGTTTAATTACC RBE_0761 837469 - 838230 + | cell surface antigen Sca3 TERM 827 838776 - 838797 + G 70 -7.3 -3.64599 | GAGCTACTGCAATTG TTACTGGTC TTAT GACCGGTGA TTTAGGATATAATGC RBE_0762 838568 - 840034 + | cell surface antigen Sca3 RBE_0763 841177 - 840008 - | ABC-type anion transport system permease component RBE_0764 841754 - 841320 - | ABC-type anion transport system permease component RBE_0765 842690 - 841965 - | hypothetical protein xseB 843243 - 843001 - | exodeoxyribonuclease VII small subunit RBE_0767 845892 - 843256 - | hypothetical protein TERM 828 843292 - 843309 + g 85 -4.9 -5.66868 | overlap 843279 TGCCTCTGTAGTTGT TTGCTGA GGTA TTAGCAA TTTTTTTAATTCATT TERM 829 844191 - 844157 - G 75 -8.1 -3.70438 | overlap 844158 AAATCAGTACTTAAA CTACCATCTTTAATT TCGAC AGTTAAAGATGGTAA TACGCTGGAAGCATC TERM 830 844190 - 844158 - G 75 -9.4 -2.8154 | overlap 844157 AATCAGTACTTAAAC TACCATCTTTAATT TCGAC AGTTAAAGATGGTA ATACGCTGGAAGCAT rimM 846111 - 846611 + | 16S rRNA-processing protein TERM 831 846690 - 846720 + T 84 -8.6 -4.33785 | opp_overlap 846697, overlap 846697 ATGAACTAGAGCCAG TTAAAAATACTAAT TTT ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 832 846697 - 846713 + T 95 -6.7 -5.77677 | opp_overlap 846697, overlap 846690 AGAGCCAGTTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC TERM 833 846713 - 846697 - T 78 -6.7 -4.67755 | opp_overlap 846690 846697 AGAGCCAGTTAAAAA TACTAAT TTT ATTAGTA TTTTTTATTATTTTC TERM 834 846752 - 846762 + T 78 -6.8 -4.53705 | opp_overlap 846752 GTTCCCAAGCAACGA CACC GAG GGTG TTTTCTATCCACGTT sca4 850165 - 846797 - | cell surface antigen Sca4 tlc4 851805 - 850243 - | ATP/ADP translocase truB 851878 - 852759 + | tRNA pseudouridine synthase B rpsO 852781 - 853056 + | 30S ribosomal protein S15 TERM 835 853428 - 853451 + G 91 -8.2 -5.03314 | gap 1 AGAGAAATGGCATAT GCTG-CTGGTA AAA TACCAGGCGGC TTTTTTAAGCGTGAG pnp 853224 - 855458 + | polynucleotide phosphorylase/polyadenylase TERM 836 855581 - 855551 - f 84 -8.6 -4.33182 | opp_overlap 855558, overlap 855558 GCATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATTCCGTGAAT TERM 837 855574 - 855558 - f 95 -6.7 -5.77677 | opp_overlap 855558, overlap 855551 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC TERM 838 855558 - 855574 + F 78 -6.7 -4.68424 | opp_overlap 855551 855558 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATTC kpsF 855709 - 856668 + | KpsF RBE_0775 856672 - 857265 + | hypothetical protein RBE_0776 857231 - 857686 + | hypothetical protein abcT2 857687 - 858409 + | ABC transporter ATP-binding protein exoC 858650 - 860083 + | phosphomannomutase RBE_0780 861850 - 860975 - | hypothetical protein miaA 860084 - 861031 + | tRNA delta(2)-isopentenylpyrophosphate transferase nuoN1 862012 - 863394 + | NADH dehydrogenase subunit N birA 863401 - 864201 + | biotin-(acetyl-CoA carboxylase) ligase RBE_0783 864694 - 865335 + | hypothetical protein RBE_0784 865378 - 866199 + | hypothetical protein TERM 839 866572 - 866551 - g 80 -5.3 -5.19916 | gap 1 AAAAGATTTAAAAAA TTTAGC-CAA AGA TTGTGCTAAA ACTATTAAAAATACC RBE_0785 866207 - 867346 + | hypothetical protein RBE_0786 867609 - 868127 + | hypothetical protein RBE_0787 869066 - 868359 - | putative hydrolase TERM 840 868987 - 869009 + g 74 -7 -4.28375 | opp_overlap 868988, overlap 868988 TGAAGAACCAATGCA ACAGGAGCAT TAT ATGCTTCTGC TTTTACATATATTCC TERM 841 869008 - 868988 - G 71 -8.3 -3.26428 | opp_overlap 868988 868987 GAAGAACCAATGCAA CAGGAGCAT TAT ATGCTTCTG CTTTTACATATATTC TERM 842 868988 - 869008 + g 83 -10.5 -3.16302 | opp_overlap 868988, overlap 868987 GAAGAACCAATGCAA CAGGAGCAT TAT ATGCTTCTG CTTTTACATATATTC TERM 843 869177 - 869127 - R 93 -11.4 -3.60296 | gap 2, opp_overlap 869129 CATTGCGAGCGGAAA CTTTATCACCCTGTCATCCCGTGG TCAAG CCACGGGATGACAGA--GACGAAG CTGATCTACGCAGGC RBE_0788 869472 - 869218 - | AtsE-like protein TERM 844 869759 - 869734 - R 81 -8.5 -4.23794 | opp_overlap 869734 869736 869741, overlap 869741 CTAATTTAATACAAA TAACAAATTAC ATTA GTAATTTGCTA TTGAGTAAGTATTAA plsC 870496 - 869771 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase trpS 870697 - 871683 + | tryptophanyl-tRNA synthetase RBE_0791 874199 - 872289 - | TPR repeat-containing protein RBE_0792 874561 - 874199 - | hypothetical protein RBE_0793 875632 - 874691 - | hypothetical protein TERM 845 875195 - 875213 + g 71 -7.5 -3.48593 | CTTTTTTACATCTAT TTCCTCT TTATT AGAGGAA TTATATAAAGCGATA TERM 846 876203 - 876178 - R 70 -3.5 -5.17507 | opp_overlap 876172, overlap 876172 AAAAGTCAATAAAAA TTTTTTATATT ACAT AAAATAAAAAA ATATAGGAGGAGTAT TERM 847 876504 - 876476 - R 81 -10.4 -3.20858 | opp_overlap 876470 876468, overlap 876480 GAGCATAGCGACGAA GCAATCTCAGGA CACTT TCATGAGATTGC CACGCTCCTTTTAAT gyrA 879263 - 876546 - | DNA gyrase subunit A TERM 848 876685 - 876667 - G 85 -8.2 -4.44046 | TCTAGTCTAAATAAA GTAACACC GCT AGTGTTAC GCCCTGTAATACGTA RBE_0795 879807 - 880682 + | hypothetical protein RBE_0796 881043 - 881453 + | hypothetical protein lon1 883825 - 881498 - | ATP-dependent protease La TERM 849 881649 - 881660 + g 72 -5.8 -4.41047 | overlap 881648 881647 ATCCCTCCTCTACTT GCTG CTAG CAGC TTTTCCTTAAGACCT TERM 850 883792 - 883813 + g 74 -2.9 -5.5112 | overlap 883793 883796 ATACTACTATATCTC GCAGTGCCA TTAA TGGCAGTGA TTTTTTATTCATCAA TERM 851 884823 - 884795 - g 82 -7.5 -4.60924 | TAAACTGGTTAAAAA CACAAACAACTCC TAA AAAGCTGCTTGTG TTAATATCCGGCGGT tdcB 883912 - 884913 + | threonine dehydratase RBE_0799 885373 - 884897 - | hypothetical protein TERM 852 885046 - 885058 + g 79 -4.9 -5.16572 | CTACGGAATCATCTA TATCT AGT AGATA TTTTTTAAATTCAGT RBE_0800 885500 - 885964 + | threonine dehydratase-like protein RBE_0801 888322 - 885995 - | ankyrin repeat-containing protein TERM 853 887637 - 887654 + g 71 -7.7 -3.53174 | overlap 887620 887634 887638 TCAGGAAAATTATAT TCCGGAA ATAG TTCCGGG TATTTATCGACATAT TERM 854 887638 - 887653 + g 72 -9 -2.71422 | overlap 887620 887637 887634 CAGGAAAATTATATT CCGGAA ATAG TTCCGG GTATTTATCGACATA TERM 855 889482 - 889446 - g 90 -10.2 -4.08767 | opp_overlap 889449, overlap 889471 GTCATTCCCGCAAAA GCGGGAATCCAGAAAA AAAAA TCTACTGGATTCCTGC TTCCGCAGGAATGAC TERM 856 889787 - 889759 - g 100 -12.1 -5.0666 | opp_overlap 889765, overlap 889765 TATCCAAAAAATAAA TAAAAATATCAAT AAT ATTGATATTTTTA ACTGGATCCTGCGAT TERM 857 889765 - 889781 + G 79 -6.7 -4.67353 | opp_overlap 889759 889765 AAAAATAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC TERM 858 889781 - 889765 - g 100 -6.7 -5.63012 | opp_overlap 889765, overlap 889759 AAAAATAAATAAAAA TATCAAT AAT ATTGATA TTTTTAACTGGATCC RBE_0802 888473 - 890059 + | hypothetical protein folE 890049 - 890627 + | GTP cyclohydrolase I TERM 859 890858 - 890818 - g 86 -9.8 -3.99957 | opp_overlap 890816 TCAAATATGGATAAA GCTGGTTGTCTAGAAGTC TTAAT GCCTTGTATACAACCAGC ACATTTATGGGTAGA TERM 860 891368 - 891356 - g 82 -4.8 -5.47159 | TTGAAGAAATAAAAA GCTG GTATG CAGC TGCTGAAGAGAAGCA proS 890629 - 891927 + | prolyl-tRNA synthetase TERM 861 892488 - 892516 + G 81 -8.9 -3.90112 | opp_overlap 892495, overlap 892491 892492 GTAGCGTCAGTAATT GGAACTACAGCAG CAC TTGCTGTAGCTTC TTTAGTTACCACACA TERM 862 892491 - 892513 + G 71 -7 -4.0825 | opp_overlap 892495, overlap 892488 892492 GCGTCAGTAATTGGA ACTACAGCAG CAC TTGCTGTAGC TTCTTTAGTTACCAC TERM 863 892492 - 892512 + G 83 -10.5 -3.04468 | opp_overlap 892495, overlap 892491 892488 CGTCAGTAATTGGAA CTACAGCAG CAC TTGCTGTAG CTTCTTTAGTTACCA proP10 891990 - 893297 + | proline/betaine transporter spoT20 893940 - 893299 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 864 894033 - 894008 - R 73 -8.3 -3.4582 | overlap 894006 894011 CTAGGTTAGCAAATA GTACTCTAGGG CAAG CCCTAGAAGAC TCGAACCTAAAGTTT TERM 865 894030 - 894011 - R 71 -8.6 -2.87501 | overlap 894008 894006 GGTTAGCAAATAGTA CTCTAGGG CAAG CCCTAGAA GACTCGAACCTAAAG RBE_0807 894504 - 894040 - | Holliday junction resolvase-like protein TERM 866 894576 - 894557 - g 73 -4.4 -5.07567 | opp_overlap 894557 TTATATGCTAAAAAA TATCCAAA AACA TTTAGATA TTAAATTAATTAAAT TERM 867 895192 - 895210 + G 87 -10.4 -3.7574 | opp_overlap 895191 895190, overlap 895190 ATTTCGTCGATAATT CCGATAAT GAT ATTATCGG TGTTTTAGTCATAGG RBE_0808 894546 - 896114 + | putative membrane-associated metal-dependent hydrolase cyaY 896409 - 896119 - | frataxin-like protein RBE_0810 897421 - 896402 - | aminodeoxychorismate lyase TERM 868 897444 - 897456 + H 78 -4.1 -5.4756 | opp_overlap 897444 897437 AAAACTTAGAAAATA CCATG AAA TATGG TTTTTTCTTGACATT RBE_0811 897839 - 898132 + | hypothetical protein lpxB 899269 - 898124 - | lipid-A-disaccharide synthase RBE_0813 899651 - 899289 - | hypothetical protein RBE_0814 900187 - 899678 - | hypothetical protein TERM 869 899986 - 900016 + g 70 -6.2 -4.17516 | ATATTTTACCGCTTT CACTTTGTGCTTTA ATA TCAAGTACAAAGAG TTTATCTGCTTTAAA RBE_0815 901765 - 900257 - | Mg chelatase-related protein hslU 903158 - 901800 - | ATP-dependent protease ATP-binding subunit TERM 870 903110 - 903122 + g 85 -4.7 -5.54885 | TTTGAGAAGGTGTAA GCCCC ATA GGGTC TTTTTTATTAGTATT hslV 903703 - 903155 - | ATP-dependent protease peptidase subunit RBE_0818 903840 - 904196 + | hypothetical protein pkcI 904186 - 904539 + | protein kinase C inhibitor 1 asd 904542 - 905558 + | aspartate-semialdehyde dehydrogenase aprD 905569 - 907326 + | alkaline protease secretion ATP-binding protein AprD aprE 907456 - 908988 + | alkaline protease secretion protein AprE RBE_0823 909099 - 910292 + | hypothetical protein TERM 871 910887 - 910917 + F 84 -8.6 -4.22214 | opp_overlap 910894, overlap 910894 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCCCTGGAT TERM 872 910894 - 910910 + F 95 -6.7 -5.77677 | opp_overlap 910894, overlap 910887 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 873 910910 - 910894 - f 78 -6.7 -4.67755 | opp_overlap 910887 910894 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC RBE_0824 911061 - 911372 + | putative monovalent cation/H+ antiporter subunit G TERM 874 911656 - 911642 - g 72 -5 -4.74103 | CCTCTAATTTAAAAA TAATCC AAA GGACTA AAATTATTCCGGCAA mnhB 911377 - 912387 + | putative monovalent cation/H+ antiporter subunit B TERM 875 912449 - 912460 + G 77 -3 -5.65678 | opp_overlap 912449 AATAATATGATTAAA TATC TAAT GATA TTTTTTCTATTTTGT ccmB 912380 - 913027 + | Heme exporter protein B RBE_0827 913096 - 913539 + | hypothetical protein petA 913542 - 914102 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit petB 914109 - 915311 + | cytochrome b fbcH 915585 - 916340 + | cytochrome c1, heme protein precursor RBE_0831 917560 - 916910 - | hypothetical protein RBE_0832 917875 - 917594 - | hypothetical protein RBE_0833 918245 - 918081 - | transposase RBE_0834 919036 - 918212 - | transposase TERM 876 919216 - 919197 - H 75 -9.4 -3.01924 | opp_overlap 919197 919189 919185 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 877 919197 - 919216 + H 76 -9.4 -3.06087 | opp_overlap 919197, overlap 919189 919185 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 878 919299 - 919287 - H 78 -9.1 -3.28712 | TTTCTTTTCTTACAA TGCCG TGG CGGCA TGACACTGAGGACAT RBE_0835 919392 - 919850 + | hypothetical protein RBE_0836 919955 - 921526 + | hypothetical protein TERM 879 921534 - 921563 + F 87 -10.9 -3.39717 | opp_overlap 921534 921536 921543, overlap 921536 921543 CCGAGTAATATCTAA CAGAGATAAGGTT TTTA AACCTTATCTCTA TTAATATTCATCCAT TERM 880 921563 - 921534 - f 100 -13.1 -3.20348 | opp_overlap 921534 921536 921543, overlap 921536 921543 CCGAGTAATATCTAA CAGAGATAAGGTT TTTA AACCTTATCTCTA TTAATATTCATCCAT TERM 881 921561 - 921536 - f 100 -13.5 -3.16217 | opp_overlap 921534 921536 921543, overlap 921534 921543 GAGTAATATCTAACA GAGATAAGGTT TTTA AACCTTATCTC TATTAATATTCATCC TERM 882 921536 - 921561 + F 100 -13.5 -3.26531 | opp_overlap 921536 921534 921543, overlap 921534 921543 GAGTAATATCTAACA GAGATAAGGTT TTTA AACCTTATCTC TATTAATATTCATCC hspC1 921833 - 922336 + | small heat shock protein TERM 883 924029 - 924015 - g 77 -8.6 -3.68084 | overlap 924011 924022 ATATAGATAAACTAA CCAATG ATT CATTGG TAATAAATAATTTTA TERM 884 924244 - 924228 - g 74 -3 -5.45802 | GTGGTAAAATAAAAA TAACCG ATGGA CGATTA AATTTTACCACCGAA asmA 922364 - 924889 + | Outer membrane assembly protein RBE_0839 925695 - 924943 - | hypothetical protein TERM 885 925699 - 925729 + r 81 -9.9 -3.53307 | opp_overlap 925692 TGTATTAACCATTAC TGCCCTTATAAAA AATGA TTTTAAAAGGGCA TTATATAGGCTTATT cyoB 926695 - 925793 - | protoheme IX farnesyltransferase TERM 886 925867 - 925851 - G 79 -8.1 -4.02733 | opp_overlap 925850 TAAAATATAGAATAA GCAAAAA ATC TTTTTGC CTGCTTATTATCAGC rpsD 926813 - 927430 + | 30S ribosomal protein S4 TERM 887 927833 - 927849 + T 80 -2.3 -5.77677 | opp_overlap 927833, overlap 927826 AGAGCCAGTTAAAAA TACTCAT AAA ATTAGTA TTTTTTATTATTTTC RBE_0842 928392 - 928138 - | patatin-like phospholipase RBE_0843 929657 - 928470 - | patatin-like phospholipase RBE_0844 929841 - 930155 + | hypothetical protein RBE_0845 930169 - 931215 + | hypothetical protein RBE_0846 931254 - 932072 + | hypothetical protein RBE_0847 932361 - 932059 - | hypothetical protein dnaA 934199 - 932808 - | chromosomal replication initiation protein pspE 934588 - 934319 - | rhodanese-related sulfurtransferase TERM 888 934370 - 934352 - G 81 -3.2 -5.72616 | ATCTACATAAAAAAA TATAATGT TAG ACATTTTA TCATCAATAATAGAT TERM 889 934809 - 934795 - g 76 -3.6 -5.41941 | overlap 934796 TAAATTAAATAAAAA CTCTTT ACA AAAGAA ACTTTTTTATCGTAG RBE_0850 934775 - 935038 + | TPR repeat-containing protein mfd 935052 - 938414 + | transcription-repair coupling factor TERM 890 938509 - 938460 - f 100 -16 -4.37886 | gap 1, opp_overlap 938469, overlap 938461 938462 GCATGGCTCAGAAAA TGC-TTTAGATGTCATCCCGTGG CTTGT CCACGGGATGACATCTATACGGA AACAACATCATAATT TERM 891 938506 - 938461 - f 100 -18.6 -3.2241 | gap 1, opp_overlap 938469, overlap 938460 938462 CATGGCTCAGAAAAT GCTTTAGATGTCATCCCGTGG CTTGT CCACGGGATGACATCTATA-C GGAAACAACATCATA TERM 892 938506 - 938462 - f 100 -18.8 -2.53125 | opp_overlap 938469, overlap 938461 938460 ATGGCTCAGAAAATG CTTTAGATGTCATCCCGTGG CTTGT CCACGGGATGACATCTATAC GGAAACAACATCATA TERM 893 938469 - 938499 + F 100 -19.9 -2.87132 | opp_overlap 938461 938462 938460 AGAAAATGCTTTAGA TGTCATCCCGTGG CTTGT CCACGGGATGACA TCTATACGGAAACAA TERM 894 938611 - 938623 + G 79 -4.8 -5.27779 | opp_overlap 938611 TTCTAAAACTATTAA GGCA AACGA TGCC TTTTTTGCTATTAAA TERM 895 939483 - 939464 - g 76 -9.4 -3.01199 | overlap 939459 939463 AGTAAAGTTATAAAT GCTTTAAC TAAA GTTAAAGC CGTAAAAGGACGAAT murE 938537 - 939961 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 896 940002 - 939965 - f 87 -8.5 -4.77157 | gap 1, opp_overlap 939975, overlap 939967 GGAATCCAGTAAAAA GT-CTGTCATACTGCGGC TTG ACCGCAGTATCTCAGGAC ACAATCTGTGATACA TERM 897 939999 - 939967 - f 85 -11.3 -2.6662 | opp_overlap 939975, overlap 939965 AATCCAGTAAAAAGT CTGTCATACTGCGGC TTG ACCGCAGTATCTCAG GACACAATCTGTGAT TERM 898 939975 - 939991 + F 74 -9.4 -2.87132 | opp_overlap 939967 939965 AAAAAGTCTGTCATA CTGCGG CTTGA CCGCAG TATCTCAGGACACAA TERM 899 940043 - 940019 - f 76 -8.6 -3.494 | overlap 940021 940033 CAATCTGTGATACAA GATCCCGTGA TCAAG TCACGGGATG ACAGCTAAAAATCTG TERM 900 940041 - 940021 - f 93 -11.2 -3.31905 | overlap 940019 940033 ATCTGTGATACAAGA TCCCGTGA TCAAG TCACGGGA TGACAGCTAAAAATC murF 940120 - 941472 + | UDP-N-acetylmuramoylalanyl-D-glutamyl- 2,6-diaminopimelate--D-alanyl-D-alanyl ligase mraY 941505 - 942590 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 901 943570 - 943560 - g 80 -5.4 -5.19275 | AGCGATAAAAGAAAA GCTT CAA AAGC ATATAAACGTAAAAG rickA 942685 - 944241 + | Actin polymerization protein RickA TERM 902 944382 - 944416 + T 84 -6.7 -5.31456 | opp_overlap 944384 944392, overlap 944385 944392 CCTGACGAAGCAATC CAGTAAAAAATGCTA ATTTA TAGCATTTTTTATTA TTTTTTCTGGATTAC TERM 903 944385 - 944413 + T 100 -10.6 -4.73105 | opp_overlap 944384 944392, overlap 944382 944392 GACGAAGCAATCCAG TAAAAAATGCTA ATTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 904 944392 - 944406 + T 88 -4.3 -5.80727 | opp_overlap 944384 944392, overlap 944385 944382 CAATCCAGTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 905 944406 - 944392 - T 75 -4.3 -5.18357 | opp_overlap 944392 944385 944382, overlap 944384 CAATCCAGTAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 906 944558 - 944522 - T 100 -17.1 -4.45485 | opp_overlap 944525 944532, overlap 944532 ACTAGATCCAGAAAA CAATTAAAAATATCAAT GTT ATTGATATTTTTAATTG GATCCCGTGAATAAA TERM 907 944525 - 944555 + T 100 -13 -3.06915 | opp_overlap 944522 944532, overlap 944532 AGATCCAGAAAACAA TTAAAAATATCAAT GTT ATTGATATTTTTAA TTGGATCCCGTGAAT TERM 908 944532 - 944548 + T 82 -6.7 -4.88407 | opp_overlap 944522 944532, overlap 944525 GAAAACAATTAAAAA TATCAAT GTT ATTGATA TTTTTAATTGGATCC TERM 909 944548 - 944532 - T 83 -6.7 -5.07971 | opp_overlap 944532 944525, overlap 944522 GAAAACAATTAAAAA TATCAAT GTT ATTGATA TTTTTAATTGGATCC bcr1 946053 - 944839 - | MFS-type bicyclomycin resistance protein ychF 947623 - 946526 - | translation-associated GTPase RBE_0858 949270 - 947648 - | Type I restriction-modification system methyltransferase subunit RBE_0859 950153 - 949230 - | Type I restriction-modification system methyltransferase subunit TERM 910 949495 - 949506 + gr 81 -4.4 -5.42458 | TCAAGAGGGTTATAC GGAA ATAA TTCC TTTATTTTTTTTCTT RBE_0860 950617 - 950189 - | acetyltransferase TERM 911 950506 - 950496 - G 77 -4 -5.40464 | CATGAGAAAGAAAAA GATT TTA AATC ACCCGTTAAACCTTT TERM 912 950705 - 950665 - R 83 -10.6 -3.29511 | gap 2, overlap 950666 GGTATTGTTTTATAA TTCCAGTGTCATCCCGTGGC TTG ACCACGGGATGACA--GGAG CGATACCTAAACCAT TERM 913 950704 - 950666 - R 100 -14.1 -2.57564 | gap 2, overlap 950665 GTATTGTTTTATAAT TCCAGTGTCATCCCGTGGC TTG ACCACGGGATGACA--GGA GCGATACCTAAACCA pth 951269 - 950712 - | peptidyl-tRNA hydrolase TERM 914 951131 - 951143 + g 75 -2.7 -5.64421 | TAGTACTTTCAGCAA TTTCA CAA TGGAA TTTTTTCTTTACACT TERM 915 951492 - 951462 - R 84 -8.6 -4.33785 | opp_overlap 951462 951469, overlap 951469 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTTGATACCTTGGAG TERM 916 951462 - 951492 + r 70 -8.6 -2.52933 | opp_overlap 951462 951469, overlap 951469 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTTGATACCTTGGAG TERM 917 951469 - 951485 + r 80 -6.7 -4.7629 | opp_overlap 951469 951462, overlap 951462 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTTGATAC TERM 918 951485 - 951469 - R 95 -6.7 -5.77677 | opp_overlap 951462 951469, overlap 951462 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTTGATAC TERM 919 951576 - 951600 + r 74 -8.6 -3.33162 | overlap 951574 951578 AGTCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 920 951578 - 951598 + r 93 -11.2 -3.23393 | overlap 951574 951576 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA rplY 952352 - 951744 - | 50S ribosomal protein L25/general stress protein Ctc nrdG 953104 - 952427 - | organic radical activating protein rpmI 953283 - 953489 + | 50S ribosomal protein L35 rplT 953505 - 953858 + | 50S ribosomal protein L20 TERM 921 953875 - 953889 + F 76 -10 -2.63301 | ATAGACAACGTCATT GCGAAG CCA CTTCGC TGCTGTGGCAATCTC rpmH 954006 - 954140 + | 50S ribosomal protein L34 rnpA 954162 - 954524 + | ribonuclease P TERM 922 954678 - 954706 + T 78 -6.2 -4.73105 | opp_overlap 954677 954685, overlap 954685 ACGAAGCAAGGAAGT AAAAAAATGCTA ACTTA TAGCATTTTTTA TTATTTTTTCTGGAT TERM 923 954699 - 954685 - T 88 -4.3 -5.66868 | opp_overlap 954685 954678, overlap 954677 AAGGAAGTAAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 924 954685 - 954699 + T 88 -4.3 -5.80727 | opp_overlap 954677 954685, overlap 954678 AAGGAAGTAAAAAAA TGCTA ACTTA TAGCA TTTTTTATTATTTTT TERM 925 954846 - 954860 + T 71 -7.2 -3.79906 | TGAGATTGCTTCGTC GAAACT TTC AGTTTC TTCTTCTCGCAATGA sec7 957280 - 955271 - | Sec7 domain-containing protein tme 959620 - 957323 - | malic enzyme RBE_0870 960685 - 959753 - | putative permease lysK 962455 - 960887 - | lysyl-tRNA synthetase TERM 926 961675 - 961693 + g 87 -10.4 -3.62864 | opp_overlap 961673 TCTCAGAGTAAAGTC GACCATTT GCT AAATGGTC TTTCCCGTACATTTC TERM 927 962640 - 962612 - H 100 -19 -2.53392 | AAACGTCCTAAGGTA GTCATCCCGTGG CTTGT CCACGGGATGAC AAGTGTGCAATGCCT dsbB 962703 - 963224 + | disulfide bond formation protein DsbB RBE_0873 964367 - 963639 - | ABC transporter ATP-binding protein RBE_0874 965203 - 964364 - | ABC transporter permease protein RBE_0875 966173 - 965208 - | ABC-type transport system, periplasmic component TERM 928 966655 - 966639 - g 80 -9.4 -3.56643 | opp_overlap 966637 966636 966639 CTGATAGCTTTCAAA GGGGAG CTAAC CTCCCC TGCTTTTCCTAAAAT TERM 929 966639 - 966655 + G 76 -9.4 -3.13772 | opp_overlap 966639, overlap 966637 966636 CTGATAGCTTTCAAA GGGGAG CTAAC CTCCCC TGCTTTTCCTAAAAT RBE_0876 966582 - 967328 + | hypothetical protein RBE_0877 968223 - 967579 - | hypothetical protein TERM 930 968182 - 968161 - G 77 -8.8 -3.62478 | GAAGTAACCTCTAAA GCTATCAG TACAAC CTGATAGC ACAAAAACACCTAAA murG 969430 - 968360 - | N-acetylglucosaminyl transferase TERM 931 969138 - 969118 - G 83 -6.9 -4.84359 | GCACTCTTAGAAAAA TTGCTGCAA ACA TTGAAGCAA CAACCGGATAACCAC ftsW 970560 - 969427 - | cell division protein ftsW TERM 932 969786 - 969798 + g 80 -7.7 -4.2558 | AATCAGTATGTGAAT CAGGT AGA ACCTG TTTTACTGCCCCCTC TERM 933 970719 - 970675 - R 78 -10.3 -2.55545 | opp_overlap 970676, overlap 970674 970672 TTGCTAAGAACATAG CGATTCAGCAATCTTATAAGA CAT TTTCATAAGATTACCAAATCG AAACCTCTCCTCACA RBE_0880 971228 - 970815 - | hypothetical protein murD 972735 - 971383 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 934 972230 - 972216 - G 72 -8.6 -2.98778 | overlap 972213 TAATATTAAGAAGCA CTGCTA TTT TAGCAG CAAAAGTTTTCACTA RBE_0882 973400 - 972753 - | hypothetical protein RBE_0883 973998 - 973330 - | cytosine-C5 specific DNA methylase RBE_0884 974454 - 974011 - | cytosine-C5 specific DNA methylase-like protein RBE_0885 974739 - 974491 - | hypothetical protein lspA 975355 - 974765 - | lipoprotein signal peptidase TERM 935 975228 - 975214 - G 76 -8.6 -3.37773 | overlap 975213 975210 TATTTAAAAAAGAAG TGACCT TTA AGGTCA AGCCAGGCTTCCATC nlpD2 977013 - 975646 - | membrane-bound metallopeptidase TERM 936 977096 - 977086 - H 76 -2.6 -5.59534 | opp_overlap 977086 977089, overlap 977089 AATTACAATAAAAAA TTAT AAA ATAA TTTAGTTTTAAATCG tagD 977166 - 977720 + | glycerol-3-phosphate cytidyltransferase TagD coxB 977797 - 978606 + | cytochrome c oxidase polypeptide II TERM 937 978719 - 978743 + F 77 -8.6 -3.54951 | overlap 978717 978721 AGTCAATTATATTGT CATCCCGTGA CTTTA TCACGGGATC TTGTGTCATAGAATG TERM 938 978721 - 978741 + F 93 -11.2 -3.34902 | overlap 978717 978719 TCAATTATATTGTCA TCCCGTGA CTTTA TCACGGGA TCTTGTGTCATAGAA TERM 939 979375 - 979390 + G 72 -4.8 -4.81852 | TTTACTTGACATGTT TCAATA ATGA TATTGA TTTTGTTACTTATAA RBE_0890 979014 - 979916 + | hypothetical protein TERM 940 980610 - 980636 + G 73 -8 -3.40022 | CATTCTTGATAATTT TAGCTATGCCAG TGC TTGGCGGAGCTA TTACTATGTTACTTA coxA 979967 - 981565 + | cytochrome c oxidase polypeptide I TERM 941 981801 - 981749 - g 70 -3.8 -5.03314 | gap 1, opp_overlap 981764, overlap 981752 981757 981764 TCTATTGGGAAAAAA TTACTAGATTTAAAAGTAGTTC-AT CAAG ATGGAACTACTCTTAAAGGTAGTGA AGCATTTATTAGATT RBE_0892 981569 - 981943 + | RDD family protein RBE_0893 981943 - 982464 + | 5-formyltetrahydrofolate cyclo-ligase TERM 942 982492 - 982482 - g 71 -5.4 -4.73094 | opp_overlap 982489, overlap 982491 AATATGAATAGAAAA CCTA TAA TAGG AATTACTCCTGATTT RBE_0894 982470 - 983219 + | putative glutamine amidotransferase RBE_0895 984687 - 983362 - | leucine-rich repeat-containing ribonuclease inhibitor TERM 943 985105 - 985138 + H 75 -4.2 -5.31456 | gap 1, opp_overlap 985107 985115, overlap 985107 985114 GACGAAGCAAGGAAG TA-TAAAAAATGCTA ATTTA TAGCGTTTTTTATTA TTTTTTCTGGATTGC TERM 944 985107 - 985135 + H 87 -8.4 -4.73105 | opp_overlap 985107 985115, overlap 985105 985114 CGAAGCAAGGAAGTA TAAAAAATGCTA ATTTA TAGCGTTTTTTA TTATTTTTTCTGGAT TERM 945 985114 - 985128 + H 80 -2.1 -5.80727 | opp_overlap 985107 985115, overlap 985107 985105 AGGAAGTATAAAAAA TGCTA ATTTA TAGCG TTTTTTATTATTTTT TERM 946 985275 - 985239 - H 100 -12.7 -5.29782 | opp_overlap 985249 TAGATCCAGAAAAAA CAACTAAAAATATCAAT GTT ATTGATATTTTTAACTG GATCCCGTGAATAAA TERM 947 985249 - 985265 + H 78 -6.7 -4.67353 | opp_overlap 985239 AAAAACAACTAAAAA TATCAAT GTT ATTGATA TTTTTAACTGGATCC TERM 948 986208 - 986189 - g 74 -5.8 -4.61482 | overlap 986186 TGCTCGAAAAAATAA TAACTCTA TTAT TAGAGCTA AAGAATTAAAACTAT RBE_0896 985722 - 986231 + | hypothetical protein TERM 949 986797 - 986811 + T 85 -2.9 -5.84381 | TTTTAGTGCTAGAGG CTTAA CGTAT TTAAG TTTTTTTATTCCTGG TERM 950 986897 - 986868 - T 71 -7.2 -3.70853 | gap 1 GGAATCACGCAACAA TG-CTTCCCGTGA TTTAT TCACGGGATGACA GGGGAAAATGATCCA secA 989682 - 986950 - | preprotein translocase subunit SecA TERM 951 988055 - 988066 + g 73 -4.4 -5.09762 | AATAACCCGCCTGCT GCAA TTAC TTGC TTTTTCTCTTCAGCT prsA 989902 - 990756 + | protein export protein prsA precursor RBE_0899 990931 - 990767 - | transposase RBE_0900 991722 - 990898 - | transposase TERM 952 991883 - 991902 + H 76 -9.4 -3.06087 | opp_overlap 991883, overlap 991875 991871 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 953 991902 - 991883 - H 75 -9.4 -3.01924 | opp_overlap 991875 991871 991883 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT RBE_0901 992145 - 992357 + | hypothetical protein TERM 954 992729 - 992749 + F 85 -11.2 -2.52676 | opp_overlap 992743 992745 AGTTGTTTTTTTGAA TCCCGTGA ATAAA TCACGGGA TGCATTGCCCGCGTG TERM 955 995016 - 995028 + G 79 -3.5 -5.55664 | ATACAATAGAAGACT TTATT AAA AATAA TTTTTTTACTGCTGC RBE_0902 993503 - 995182 + | ankyrin repeat-containing protein RBE_0903 995838 - 996740 + | hypothetical protein queA 996947 - 998008 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase nuoL2 999474 - 998011 - | putative monovalent cation/H+ antiporter subunit D TERM 956 998442 - 998430 - G 72 -4.9 -4.91046 | TATAAAATAAACAAA TCTTT GTA AAAGA ATGCGATACTAAATG RBE_0906 999778 - 999614 - | transposase RBE_0907 1000569 - 999745 - | transposase TERM 957 1000730 - 1000749 + H 76 -9.4 -3.06087 | opp_overlap 1000730, overlap 1000722 1000718 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 958 1000749 - 1000730 - H 75 -9.4 -3.01924 | opp_overlap 1000730 1000722 1000718 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 959 1000879 - 1000857 - H 72 -5 -4.72617 | opp_overlap 1000860, overlap 1000860 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTACTGGATCCTGCG TERM 960 1000860 - 1000876 + H 80 -6.7 -4.75372 | opp_overlap 1000857 1000860 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTACTGGATCCT TERM 961 1000876 - 1000860 - H 76 -6.7 -4.42118 | opp_overlap 1000860, overlap 1000857 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTACTGGATCCT RBE_0908 1001063 - 1001644 + | tryptophan repressor binding protein TERM 962 1001682 - 1001702 + T 100 -12.6 -3.28765 | opp_overlap 1001675 1001679, overlap 1001674 1001671 GCATCTAAGGGATCA TCCCGTGG CTTGT CCACGGGA TTCAGTTTAAAATAT TERM 963 1001802 - 1001837 + T 79 -9.3 -3.4298 | opp_overlap 1001799 AAGAAATAATACGTT TCTTATAATCGCT GAGCTTAAAG AGCGATTATAAGA TTACTATATTGTTAT RBE_0909 1002395 - 1001904 - | hypothetical protein RBE_0910 1004152 - 1002764 - | hypothetical protein tyrS 1004341 - 1005576 + | tyrosyl-tRNA synthetase RBE_0912 1005817 - 1006164 + | transposase RBE_0913 1006242 - 1006415 + | transposase TERM 964 1007124 - 1007114 - g 71 -6.8 -4.07604 | opp_overlap 1007114 ATAAATGAAGAAGAA GCAC TTA GTGC TTTAGCTGACTTTGA RBE_0914 1006487 - 1007350 + | transposase TERM 965 1007657 - 1007670 + T 76 -2.5 -5.50723 | opp_overlap 1007646, overlap 1007646 ACAATATAACCTTAG TTTAT ATTT ATAAA TTTTTATTTTCATAA RBE_0915 1008740 - 1007835 - | leucine-rich repeat-containing protein TERM 966 1009095 - 1009082 - R 85 -3.9 -5.80727 | opp_overlap 1009082 AAAAATAATAAAAAA TACTA GTAC TAGTA TTTTTACTGGATCCC pepP 1011071 - 1009230 - | aminopeptidase P TERM 967 1010055 - 1010067 + g 80 -9.1 -3.65522 | overlap 1010047 TGAGATTGCTTCGTC GACGC TTT GCGTC TTCTTGCAATGACTA RBE_0917 1012369 - 1011413 - | transposase TERM 968 1012530 - 1012549 + r 76 -9.4 -3.06087 | opp_overlap 1012530, overlap 1012522 1012518 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 969 1012549 - 1012530 - R 75 -9.4 -3.01924 | opp_overlap 1012522 1012518 1012530 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 970 1012679 - 1012657 - R 72 -5 -4.72617 | opp_overlap 1012660, overlap 1012660 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 971 1012676 - 1012660 - R 76 -6.7 -4.42118 | opp_overlap 1012660, overlap 1012657 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 972 1012660 - 1012676 + r 78 -6.7 -4.67755 | opp_overlap 1012660 1012657 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT sca15 1014713 - 1012821 - | Outer memberane protein Sca15 RBE_0919 1016573 - 1015080 - | hypothetical protein TERM 973 1016146 - 1016167 + g 85 -10.3 -3.53563 | opp_overlap 1016151, overlap 1016151 CTGCCCCCATCTTTT CTAAACCAA GAAC TTGGTTTAG TTTCAGCAGACATAT TERM 974 1016349 - 1016337 - G 75 -4.9 -5.0133 | TATTGCTGCAAAAAA TTTAG ACC CTAAA AATTCAGCTATATTT hemB 1017719 - 1016727 - | delta-aminolevulinic acid dehydratase TERM 975 1017623 - 1017637 + g 76 -8.6 -3.54543 | GTAATACCAAATCTT CTACTC TAA GAGTAG TTTCAGCAACTAAAT RBE_0921 1017943 - 1020027 + | ankyrin repeat-containing protein TERM 976 1020828 - 1020815 - g 75 -2.5 -5.61277 | GAGAAAAAAAGAAAA TAAAT TTCT ATTTA CATGCCATAAAAAAT RBE_0922 1020415 - 1020969 + | hypothetical protein RBE_0923 1020988 - 1021695 + | hypothetical protein RBE_0924 1022102 - 1022755 + | hypothetical protein priA 1024698 - 1022752 - | primosome assembly protein PriA TERM 977 1023290 - 1023308 + g 70 -6.1 -4.27467 | opp_overlap 1023290 GTAAGATTTGGAAAA TGATAAC CTTTT GTTATCA TTTGTGTTCCTATTA ubiX 1024762 - 1025322 + | aromatic acid decarboxylase RBE_0927 1025391 - 1025636 + | hypothetical protein RBE_0928 1025617 - 1026009 + | hypothetical protein TERM 978 1026140 - 1026152 + G 70 -6.3 -4.21908 | opp_overlap 1026140 1026139 CAAGCAGAACAAATG TTGCT TGG AGCAA TTTTAACTAATAATG dnaB 1026038 - 1027534 + | replicative DNA helicase RBE_0930 1028936 - 1027731 - | amino acid permeases TERM 979 1028834 - 1028848 + g 70 -4.3 -4.77036 | ACATTAATATTATAC TAGGT ATTAA ACCTA TTTTTGCTAATACCA dacF 1030012 - 1029089 - | penicillin-binding protein dacF precursor ampG4 1031371 - 1030127 - | AmpG msbA1 1033232 - 1031469 - | multidrug resistance protein TERM 980 1032479 - 1032493 + g 100 -7.2 -5.70829 | opp_overlap 1032478 1032481 TCGGTGAAACTAACG CATCTA ATT TAGATG TTTTTTTGTAATATT ruvB 1034253 - 1033225 - | Holliday junction DNA helicase B RBE_0935 1034862 - 1034320 - | hypothetical protein TERM 981 1034437 - 1034426 - G 74 -3 -5.44721 | opp_overlap 1034426 ACCATGTCAAAAAAA TACT CGTT AGTA TATTTTTCTGCGTTT RBE_0936 1035490 - 1034849 - | hypothetical protein ruvA 1036164 - 1035553 - | Holliday junction DNA helicase motor protein RBE_0938 1036531 - 1036166 - | hypothetical protein RBE_0939 1037510 - 1036533 - | cell filamentation protein Fic TERM 982 1037455 - 1037473 + g 70 -4.6 -4.85618 | opp_overlap 1037455 AGCTCATAAGAAATA TCTTGTAA TAA TTCCAAGA TTTTATTAGTTATTT proP3 1037705 - 1038928 + | proline/betaine transporter TERM 983 1038958 - 1038982 + T 100 -15.9 -3.73659 | opp_overlap 1038952, overlap 1038949 1038946 TAAAAATAGCTAGGT TACTATCGGCT AAA AGCCGATAGTA TTATATATATTATTT RBE_0941 1039249 - 1038998 - | hypothetical protein RBE_0942 1039635 - 1039447 - | hypothetical protein RBE_0943 1039753 - 1039607 - | hypothetical protein RBE_0944 1040004 - 1039750 - | hypothetical protein iscA2 1040404 - 1040069 - | Iron-sulfur cluster assembly accessory protein iscU 1040803 - 1040408 - | scaffold protein iscS 1042196 - 1040964 - | cysteine desulfurase IscS TERM 984 1042211 - 1042225 + r 70 -4.4 -5.00895 | TATAATTGTGAGTAT TAAAAA TTT TTTTTA TTTTTGTGTCATACC TERM 985 1042307 - 1042335 + r 100 -12.1 -4.33785 | opp_overlap 1042313 1042316, overlap 1042313 TTCACGGGATCCAGT TAAAAATACTAAT AAA ATTAGTATTTTTA TTATTTTCTGGATCT TERM 986 1042329 - 1042313 - R 78 -6.7 -4.67353 | opp_overlap 1042307 1042313, overlap 1042316 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTATTATTTTCT TERM 987 1042313 - 1042329 + r 89 -6.7 -5.47964 | opp_overlap 1042313 1042316, overlap 1042307 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTATTATTTTCT TERM 988 1042426 - 1042405 - R 81 -10.1 -3.42256 | opp_overlap 1042403, overlap 1042403 ATCCACGCAACAATA CCTTCCCGC CTAT GCGGGAATG ACATTATACACTTCT spl1 1043532 - 1042414 - | NifS-like protein TERM 989 1042735 - 1042761 + g 100 -13.9 -4.24963 | opp_overlap 1042742 TTTCTTTAATTTTTT CTCCAAAGCTT CTTGT AAGCTTTGGAG TTTTACATGATTCTC iscR 1043948 - 1043529 - | Iron-sulfur cluster assembly transcription factor IscR RBE_0950 1046432 - 1044024 - | hypothetical protein TERM 990 1045451 - 1045468 + g 70 -4.2 -5.09895 | TTAATTCTTTATTGT CTTTAG TCATTT CTAAAG TTTTTTCAATAGCTA TERM 991 1045732 - 1045749 + g 80 -6.3 -4.84017 | overlap 1045726 ATATTTTCAGCAACT TCTTGCT TTAA AGCAGGA TTTTTATCAAAGATT RBE_0951 1046577 - 1048196 + | hypothetical protein addA 1048280 - 1048990 + | hypothetical protein RBE_0953 1049018 - 1050277 + | ATPase lpxC 1050363 - 1051229 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase RBE_0955 1052235 - 1051216 - | hypothetical protein cycM 1052317 - 1052838 + | cytochrome c RBE_0957 1052822 - 1053286 + | hypothetical protein ftsA 1054710 - 1053475 - | cell division protein ftsA TERM 992 1054281 - 1054297 + g 83 -9.5 -3.7941 | opp_overlap 1054277 TTCCGTACATACCTA TAGGGTT TTC AACCCTA TTATTATCAAGAATA TERM 993 1054370 - 1054384 + g 100 -7.2 -5.47431 | overlap 1054376 1054378 TTAAACTCCTGTAAT GCTTTT TGT AAAAGC TTTTTTATATCTTGC TERM 994 1054814 - 1054839 + H 77 -9.7 -2.89298 | gap 1 CCTCTGCTATGCATC TCCTCGCAAGGC ATT GCCT-GCGTGGA TCATTCTCTCCCCTG TERM 995 1054884 - 1054914 + H 84 -8.6 -4.33785 | opp_overlap 1054891, overlap 1054891 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 996 1054891 - 1054907 + H 95 -6.7 -5.77677 | opp_overlap 1054891, overlap 1054884 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 997 1054907 - 1054891 - H 78 -6.7 -4.67755 | opp_overlap 1054891 1054884 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 998 1055037 - 1055018 - H 76 -9.4 -3.06087 | opp_overlap 1055018, overlap 1055009 1055007 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 999 1055018 - 1055037 + H 75 -9.4 -3.01924 | opp_overlap 1055009 1055007 1055018 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_0959 1055195 - 1056151 + | transposase ftsQ 1057014 - 1056211 - | cell division protein ftsQ TERM 1000 1056389 - 1056410 + g 73 -4.4 -5.12172 | TCCCATCTTCTATCC CCACATCT AATAGC AGATGAGG TTTTATTTATTAATG TERM 1001 1056952 - 1056967 + g 79 -2.6 -5.83822 | CCCTAACTTTCGATG CAATGA AATG TTATTG TTTTTTTTAGCTGTA ddl 1057976 - 1057011 - | D-alanine--D-alanine ligase TERM 1002 1058029 - 1058061 + r 100 -17.1 -3.61536 | overlap 1058030 GTATACATTCCACTT CTGTCATCCCGTGGT CAA GCCACGGGATGACAC TTTCCCAATTCGCTT TERM 1003 1058030 - 1058060 + r 100 -20.6 -2.7644 | overlap 1058029 TATACATTCCACTTC TGTCATCCCGTGGT CAA GCCACGGGATGACA CTTTCCCAATTCGCT murB 1058940 - 1058032 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1004 1058303 - 1058288 - G 77 -7.6 -4.11216 | TCCGGATTTGCAAAA GTACTG CCGC CAGTAC GCTCCTTAATAGGCT murC 1060373 - 1058937 - | UDP-N-acetylmuramate--L-alanine ligase RBE_0964 1061786 - 1060578 - | EAL domain-containing protein bolA1 1061852 - 1062094 + | BolA-like protein RBE_0966 1062097 - 1062297 + | hypothetical protein emrA 1063714 - 1062653 - | multidrug resistance protein A TERM 1005 1063305 - 1063330 + g 76 -6.3 -4.62783 | opp_overlap 1063305 1063306 1063311, overlap 1063306 1063311 TCAGTTGAAACAATA TTAAAACTTGT TGCA GCAAGTTTTAG TTTTTCGCCTGACTG pssA 1064487 - 1063717 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1006 1063935 - 1063925 - G 71 -5.4 -4.56607 | CTAGCAAGCAGAAAA GCTA TTA TAGC TAAATATATATTAAT psd 1065372 - 1064677 - | phosphatidylserine decarboxylase RBE_0970 1065823 - 1065500 - | hypothetical protein suhB 1066643 - 1065903 - | extragenic suppressor protein suhB TERM 1007 1066207 - 1066224 + g 74 -2.1 -5.60993 | gap 1, overlap 1066210 AACCTTAGACCTTTA TGAT-TAG AAC CTAAATCA TTTTTTTCTACCCAA efp 1067373 - 1066807 - | elongation factor P pleD 1067451 - 1068824 + | response regulator PleD nudH 1068827 - 1069312 + | dinucleoside polyphosphate hydrolase TERM 1008 1069482 - 1069451 - T 100 -9.1 -4.73105 | opp_overlap 1069458, overlap 1069458 ATCCAGAAAAAATAA TAAAAAATACTAA ATAATA TTAGTATTTTTTA ACTGGATTGCTTCGT TERM 1009 1069475 - 1069458 - T 81 -2.8 -5.80727 | opp_overlap 1069458, overlap 1069451 AAAAATAATAAAAAA TACTAA ATAATA TTAGTA TTTTTTAACTGGATT RBE_0975 1070543 - 1069698 - | prophage antirepressor TERM 1010 1070335 - 1070365 + g 77 -4 -5.5074 | overlap 1070336 1070340 TCGGGTGCTTTCAGT TTCAACTCGTGACA AAA TGTCACGACTTCAC TTTTTTCTTCACTTA TERM 1011 1070336 - 1070364 + g 74 -7.5 -3.88817 | overlap 1070335 1070340 CGGGTGCTTTCAGTT TCAACTCGTGACA AAA TGTCACGACTTCA CTTTTTTCTTCACTT TERM 1012 1070340 - 1070360 + g 75 -8.3 -3.57867 | overlap 1070336 1070335 TGCTTTCAGTTTCAA CTCGTGACA AAA TGTCACGAC TTCACTTTTTTCTTC RBE_0976 1071200 - 1070739 - | hypothetical protein fimD 1073563 - 1071191 - | P pilus assembly, fimbrial usher protein TERM 1013 1073387 - 1073404 + g 74 -6.3 -4.44301 | overlap 1073383 CTCAATATCTTCAAG GGGGATT AGAT AATTCCC TTGTTTATTTTGCAT famC 1074032 - 1073688 - | P pilus assembly protein, chaperone PapD RBE_0979 1074565 - 1074062 - | spore coat protein-like protein RBE_0980 1074945 - 1075190 + | antitoxin of toxin-antitoxin (TA) system Phd RBE_0981 1075183 - 1075599 + | toxin of toxin-antitoxin (TA) system trxB2 1075676 - 1076674 + | thioredoxin reductase folD 1076921 - 1077772 + | methylenetetrahydrofolate dehydrogenase RBE_0984 1079133 - 1077970 - | ankyrin repeat-containing protein RBE_0985 1080570 - 1079563 - | ankyrin repeat-containing protein RBE_0986 1080893 - 1081408 + | hypothetical protein RBE_0987 1081485 - 1081790 + | hypothetical protein TERM 1014 1082094 - 1082110 + F 70 -8.7 -2.62396 | overlap 1082096 TTGAACTTCCGACCT CACGCTT ATC AGGCGTG TGCTCTAACCAGCTG kdsB 1082690 - 1083424 + | 3-deoxy-manno-octulosonate cytidylyltransferase pyrG 1083428 - 1085050 + | CTP synthetase TERM 1015 1086329 - 1086319 - g 74 -4 -5.13521 | AAATCACTTAAAAAA TATC ATA GATA CACTGGGTTATAGCT tlc2 1085156 - 1086679 + | ATP/ADP translocase TERM 1016 1086975 - 1086958 - f 76 -3.5 -5.4492 | CATACATACAAAAAA CATATTA TAAA TAATACG ATGTCAAATTTTCAT RBE_0991 1086976 - 1087194 + | hypothetical protein TERM 1017 1087232 - 1087218 - T 74 -2.2 -5.52023 | ATTATGAACAAAAAA TATCAA ATC TTAATA TGATTGATAATAAAT acpS 1087869 - 1087486 - | 4'-phosphopantetheinyl transferase rpoZ 1088250 - 1087870 - | DNA-directed RNA polymerase subunit omega TERM 1018 1088464 - 1088434 - R 84 -8.6 -4.33182 | opp_overlap 1088441, overlap 1088441 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1019 1088457 - 1088441 - R 95 -6.7 -5.77677 | opp_overlap 1088441, overlap 1088434 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1020 1088441 - 1088457 + r 78 -6.7 -4.67353 | opp_overlap 1088441 1088434 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC murA 1089881 - 1088622 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1021 1089500 - 1089488 - G 77 -7.7 -4.10657 | opp_overlap 1089487 CCATAGCCTTTAAAA CTGCA ATA TGCAG ATCTACTTGTCTTGC gyrB 1092473 - 1090047 - | DNA gyrase subunit B TERM 1022 1092239 - 1092252 + g 77 -4.5 -5.27335 | opp_overlap 1092239, overlap 1092247 GCCCGTTATCAGATA CGGTT ACCG AGCCG TTTTTATTTAAAACG RBE_0996 1092711 - 1093571 + | HAD family hydrolase TERM 1023 1093639 - 1093663 + T 74 -8.6 -3.33162 | overlap 1093641 AGTCAATTATATTGT CATCCCGTGA TTTAT TCACGGGATC TTGTGCCATAGAATG TERM 1024 1093641 - 1093661 + T 93 -11.2 -3.23393 | overlap 1093639 TCAATTATATTGTCA TCCCGTGA TTTAT TCACGGGA TCTTGTGCCATAGAA RBE_0997 1095747 - 1093903 - | ankyrin repeat-containing protein TERM 1025 1095039 - 1095053 + g 78 -2.2 -5.7827 | opp_overlap 1095048, overlap 1095041 1095048 TTTCACCGTTATTAT TTTTTA AAT TAAAGA TTTTTTCTTTATCTT RBE_0998 1097005 - 1096364 - | transposase mgtE 1097355 - 1098725 + | magnesium transporter RBE_1000 1099961 - 1098741 - | hypothetical protein TERM 1026 1099185 - 1099207 + g 84 -2 -6.11229 | overlap 1099187 TCTCTTAATTTTTTC TCGTTGTTGA CCT TCAATAGCTA TTTTTTTATTTTGCT RBE_1001 1100910 - 1100068 - | hypothetical protein TERM 1027 1100500 - 1100480 - G 74 -4.1 -5.27335 | TTTTTCAAATAAAAA TTATTAACT AAT AGTTTATAA AGCTGCAATATTGAA xerD 1101911 - 1100994 - | site-specific tyrosine recombinase XerD TERM 1028 1102013 - 1102049 + r 100 -13.8 -3.05384 | opp_overlap 1102016 CCCAGCCAGTATTAT TAATGTCATCCCGTGG CTTGT CCACGGGATGACAGGA TTAAATAACAAACCG TERM 1029 1102046 - 1102016 - R 100 -19.9 -3.23395 | opp_overlap 1102013 AGCCAGTATTATTAA TGTCATCCCGTGG CTTGT CCACGGGATGACA GGATTAAATAACAAA recG 1104326 - 1102104 - | ATP-dependent DNA helicase RecG TERM 1030 1103593 - 1103609 + g 86 -5.9 -5.38047 | TGATTAGCGATGAGT TCTTTAG TGG CTAAGGA TTTTTTATGTACATC TERM 1031 1104391 - 1104375 - R 79 -5.3 -5.19328 | ACTTTATAATAAAAA TTAAAAT ATA ATTTTAA AAAGCATCGTATGTC RBE_1004 1105484 - 1104525 - | hypothetical protein RBE_1005 1105880 - 1106170 + | succinyl-CoA:3-ketoacid-coenzyme A transferase RBE_1006 1106417 - 1106581 + | succinyl-CoA:3-ketoacid-coenzyme A transferase scoB 1106582 - 1107220 + | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B RBE_1008 1107445 - 1107281 - | transposase RBE_1009 1108236 - 1107412 - | transposase TERM 1032 1108416 - 1108397 - R 75 -9.4 -3.01924 | opp_overlap 1108389 1108385 1108397 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1033 1108397 - 1108416 + r 76 -9.4 -3.06087 | opp_overlap 1108397, overlap 1108389 1108385 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT nuoN2 1110034 - 1108736 - | putative monovalent cation/H+ antiporter subunit D TERM 1034 1110122 - 1110092 - R 84 -8.6 -4.33785 | opp_overlap 1110099, overlap 1110099 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1035 1110099 - 1110115 + r 78 -6.7 -4.67353 | opp_overlap 1110092 1110099 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1036 1110115 - 1110099 - R 95 -6.7 -5.77677 | opp_overlap 1110099, overlap 1110092 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC mnhC 1110517 - 1110182 - | putative monovalent cation/H+ antiporter subunit C TERM 1037 1110605 - 1110574 - R 84 -9.5 -3.7331 | gap 1, overlap 1110572 ATTTTGATTAAAAGA CTG-GATCCCGTGG TCAAG CCACGGGATGACAG AACTCAGTATGCTCT virB9-1 1111361 - 1110609 - | VirB9 TERM 1038 1110755 - 1110739 - G 72 -7.3 -3.80858 | CGATAATTTACTAAA GACTCAC GCA GTGAATC ATCTACAGCAAAAAT virB8-1 1112067 - 1111363 - | VirB8 TERM 1039 1112269 - 1112293 + H 73 -8.1 -3.50219 | opp_overlap 1112275, overlap 1112272 1112275 1112292 AATAATTATTGATGG TAATAATATTG TAT CAATATTATTG TTATATAACACTGTT TERM 1040 1112272 - 1112290 + H 76 -7.6 -3.885 | opp_overlap 1112275, overlap 1112269 1112275 AATTATTGATGGTAA TAATATTG TAT CAATATTA TTGTTATATAACACT TERM 1041 1112812 - 1112839 + G 95 -8.8 -4.93898 | opp_overlap 1112812 1112816 1112819, overlap 1112810 GTTCAACGTAACTTA TTAATAATATTA CTGA TAATATTATTAA TTTTTATGATAATAT TERM 1042 1113074 - 1113094 + G 93 -7 -5.39755 | opp_overlap 1113074 CACGCACTACTATAA GATTACTT TCAAC AAGTAATC TTTTTTATGGTTATC virB8-2 1112665 - 1113384 + | VirB8 virB9-2 1113371 - 1113856 + | VirB9 virB10 1113963 - 1115396 + | VirB10 virB11 1115393 - 1116397 + | hypothetical protein virD4 1116530 - 1118308 + | hypothetical protein TERM 1043 1118333 - 1118311 - f 73 -8.6 -3.17608 | opp_overlap 1118310 1118311 1118313, overlap 1118302 1118309 AAACAGTGAGTAATA TATACCCAAA TGA TTTGAGTATA ATTCTACTCTTAAAA gppA 1118369 - 1119778 + | guanosine pentaphosphate phosphohydrolase vapB1 1119876 - 1120163 + | antitoxin of toxin-antitoxin (TA) system VapB vapC1 1120154 - 1120558 + | toxin of toxin-antitoxin (TA) system VapC nuoL3 1120560 - 1122107 + | putative monovalent cation/H+ antiporter subunit D TERM 1044 1122145 - 1122114 - f 79 -10.2 -2.94747 | gap 1 GTACTGTAGTATACA CTGTCATCCCGTGGC TTG ACCACGGGATC-CAG TAAAAAAATACAATT RBE_1023 1122187 - 1123929 + | protease II RBE_1024 1123847 - 1124272 + | protease II TERM 1045 1124325 - 1124349 + F 74 -8.6 -3.33162 | overlap 1124323 1124327 AATCAATTATATTGT CATCCCGTGA CTTGA TCACGGGATC TTGTGCCATAGAATG TERM 1046 1124327 - 1124347 + F 93 -11.2 -3.23393 | overlap 1124323 1124325 TCAATTATATTGTCA TCCCGTGA CTTGA TCACGGGA TCTTGTGCCATAGAA RBE_1025 1124499 - 1125176 + | ankyrin repeat-containing protein TERM 1047 1125869 - 1125879 + G 73 -4.6 -5.09426 | CTAAAATCGCTATAG GCTC AGG GGGC TTTTTTGGGCTTGGG TERM 1048 1125967 - 1125981 + G 76 -6.4 -4.59109 | overlap 1125978 ATTTTTGCTACTTTT GCTGAA GAA TTCGGC TTTTTAGGCGGTATG rodA 1125169 - 1126275 + | rod shape-determining protein rodA TERM 1049 1126281 - 1126323 + T 71 -4.5 -4.72201 | gap 1, overlap 1126283 1126284 AAATATATGAGAGTT TGGTT-TGACTATTATAACG AGCA TGTTATAATAGTCACAAATA TTATTTTTTATAACC corA 1127290 - 1126331 - | magnesium/cobalt transporter CorA TERM 1050 1126411 - 1126397 - G 72 -5.7 -4.49314 | GACCATTAAAAACAA GGCTA TAGGG TAGCC GTAAGGCGATTGAAG TERM 1051 1127455 - 1127442 - g 70 -3.9 -5.02421 | AAAACCAAAAATAAA TACAA GATA TTGTA GTATATGTGCAGGGT RBE_1028 1127416 - 1127859 + | hypothetical protein TERM 1052 1128781 - 1128757 - g 84 -10.9 -3.13432 | TTTAAGAGTACTTAA TCTCTCTAATA ACA CATTAGAGAGA GAAAAAACAATAATA TERM 1053 1129325 - 1129313 - g 74 -4.1 -5.28826 | AAATTTTATAAAAAA GTTCC TAA GAAAC TGTTAAAAGAATGTT RBE_1029 1128152 - 1129570 + | leucine-rich repeat-containing protein RBE_1030 1130604 - 1129660 - | hypothetical protein RBE_1031 1132316 - 1130742 - | hypothetical protein TERM 1054 1131425 - 1131381 - GR 77 -8.2 -3.85389 | gap 1, opp_overlap 1131381 1131413, overlap 1131413 TTGCAATAATTGAAA TTGGAACGAATAATC-GCTAT TATG ATAGATGATTATTGGTTCCAA TAATTCTTCTAATCC TERM 1055 1131381 - 1131425 + gr 83 -10.4 -3.00003 | gap 1, opp_overlap 1131381 1131413, overlap 1131413 TTGCAATAATTGAAA TTGGAACGAATAATCG-CTAT TATG ATAGATGATTATTGGTTCCAA TAATTCTTCTAATCC RBE_1032 1135986 - 1132270 - | hypothetical protein TERM 1056 1132796 - 1132818 + grH 80 -7.8 -4.22346 | opp_overlap 1132796 1132801 AATAATACGATATCA GGAAATGTAA CTG TTACATTACC TTTTACATCAATTTC TERM 1057 1134954 - 1134967 + grH 74 -3.9 -5.28778 | ATAAATCTAAAATTT CTTTT TCTG AAAAG TTTTTTATACCTGGT TERM 1058 1135355 - 1135371 + grH 71 -5.2 -4.57353 | AAGTTCGAGGCTTTT CTTGAT AATAA ATCAAG TTTTCTCTGCTCAAC spoT21 1138072 - 1137341 - | guanosine polyphosphate pyrophosphohydrolase/synthetase RBE_1033 1136224 - 1137417 + | MFS-type transporter RBE_1035 1139817 - 1138324 - | chromosomal replication initiator protein DnaA-like protein TERM 1059 1138951 - 1138965 + g 70 -4.2 -5.09521 | ATCTTCACTATTAGC CGTAAC AGT GTCACG TTTTTCGTTTATTAA TERM 1060 1139374 - 1139351 - G 100 -12.6 -4.07568 | opp_overlap 1139351 TTGTGTGGGTGAAAA TTATTTCGGG CAAC CCCGAAATAA TTTTCAGGTTGACCT TERM 1061 1139351 - 1139374 + g 100 -12.6 -4.19506 | opp_overlap 1139351 TTGTGTGGGTGAAAA TTATTTCGGG CAAC CCCGAAATAA TTTTCAGGTTGACCT TERM 1062 1139376 - 1139393 + g 95 -8.5 -5.03314 | opp_overlap 1139376 1139375 CAACCCCGAAATAAT TTTCAGG TTGA CCTGAAA TTTTTTGCGGGTAGG TERM 1063 1139393 - 1139376 - G 71 -8.5 -2.95918 | opp_overlap 1139376, overlap 1139375 CAACCCCGAAATAAT TTTCAGG TTGA CCTGAAA TTTTTTGCGGGTAGG TERM 1064 1139826 - 1139798 - G 88 -6.1 -5.38054 | opp_overlap 1139797 1139798 TCTGACAAAGAAAAA GGAGCAACTAT TTTATTC ATAGTTCCTCC ATTTTATTGAGGGAA rpsT 1140365 - 1140102 - | 30S ribosomal protein S20 TERM 1065 1140264 - 1140277 + g 70 -3.9 -5.08601 | opp_overlap 1140264 AATTTCATGTAAAAC CTTTT TCAC AAAAG TTTTTATTGCACTAG rplQ 1140793 - 1140365 - | 50S ribosomal protein L17 rpoA 1141830 - 1140805 - | DNA-directed RNA polymerase subunit alpha TERM 1066 1141490 - 1141506 + g 74 -6.5 -4.46656 | ATACCAGCCGTTATA GCACCAG GTC CTGTTGC TTTTAATCTTATAAC TERM 1067 1141531 - 1141541 + g 71 -5.4 -4.65153 | opp_overlap 1141521, overlap 1141521 TATAACACGTTTTTC TGCA ACG TGCA TTTTGATTTCTATGC rpsK 1142230 - 1141847 - | 30S ribosomal protein S11 rpsM 1142632 - 1142255 - | 30S ribosomal protein S13 adk 1143329 - 1142691 - | adenylate kinase TERM 1068 1143093 - 1143120 + g 80 -5.8 -4.96646 | opp_overlap 1143092 1143114, overlap 1143114 ATCTAATATATAACC TTTTTTATAATC AGAA GATGATAAAAAA TTTTTAATTATATGA secY 1144644 - 1143343 - | preprotein translocase subunit SecY TERM 1069 1143698 - 1143688 - G 77 -4 -5.32608 | AAAAAAGCTAAAAAA CATT ATC AATG CTACATACAATAATA TERM 1070 1143959 - 1143928 - G 85 -10.4 -3.3941 | opp_overlap 1143928 1143931, overlap 1143931 AGGATACTGAACTAA TAATTTTCTTTGTG CTTT CTCAAAGAAAATTA TTATAGATATTAATA TERM 1071 1143928 - 1143959 + g 85 -10.4 -3.43217 | opp_overlap 1143928 1143931, overlap 1143931 AGGATACTGAACTAA TAATTTTCTTTGTG CTTT CTCAAAGAAAATTA TTATAGATATTAATA TERM 1072 1143931 - 1143956 + g 74 -7.7 -3.84639 | opp_overlap 1143928 1143931, overlap 1143928 ATACTGAACTAATAA TTTTCTTTGTG CTTT CTCAAAGAAAA TTATTATAGATATTA TERM 1073 1143956 - 1143931 - G 74 -7.7 -3.83006 | opp_overlap 1143931 1143928, overlap 1143928 ATACTGAACTAATAA TTTTCTTTGTG CTTT CTCAAAGAAAA TTATTATAGATATTA rplO 1145106 - 1144648 - | 50S ribosomal protein L15 rpmD 1145317 - 1145120 - | 50S ribosomal protein L30 rpsE 1145873 - 1145343 - | 30S ribosomal protein S5 rplR 1146245 - 1145889 - | 50S ribosomal protein L18 rplF 1146793 - 1146260 - | 50S ribosomal protein L6 rpsH 1147201 - 1146803 - | 30S ribosomal protein S8 rpsN 1147526 - 1147221 - | 30S ribosomal protein S14 TERM 1074 1147425 - 1147435 + g 72 -2.6 -5.47846 | TTCTAATGAAATATT TTTA TCG TAAA TTTTATTTTTTAATT rplE 1148080 - 1147541 - | 50S ribosomal protein L5 rplX 1148409 - 1148080 - | 50S ribosomal protein L24 rplN 1148778 - 1148410 - | 50S ribosomal protein L14 rpsQ 1149083 - 1148850 - | 30S ribosomal protein S17 rpmC 1149301 - 1149089 - | 50S ribosomal protein L29 rplP 1149704 - 1149294 - | 50S ribosomal protein L16 rpsC 1150373 - 1149720 - | 30S ribosomal protein S3 TERM 1075 1150084 - 1150100 + g 77 -3 -5.55698 | overlap 1150075 ACTTCACTTAAAGAA GTCATT TTTTC AATGGC TTTTTTTAGCTTATC rplV 1150734 - 1150375 - | 50S ribosomal protein L22 TERM 1076 1150699 - 1150714 + g 93 -6.2 -5.52079 | TCTAATTGATTTAGC TTTTGC CGTG GCAAAA TTTTTATTTTCCTGT rpsS 1151019 - 1150741 - | 30S ribosomal protein S19 rplB 1151867 - 1151046 - | 50S ribosomal protein L2 rplW 1152164 - 1151868 - | 50S ribosomal protein L23 rplD 1152784 - 1152161 - | 50S ribosomal protein L4 TERM 1077 1152579 - 1152595 + g 80 -5.2 -5.1861 | CTTGCATTCCCTGTA CCTTTT TGCTT AAAAGG TTTTTTGGTAGTACC rplC 1153486 - 1152839 - | 50S ribosomal protein L3 rpsJ 1153803 - 1153486 - | 30S ribosomal protein S10 TERM 1078 1153889 - 1153852 - R 100 -13.9 -4.16943 | opp_overlap 1153858, overlap 1153854 1153858 TTTTACATCTTAAAA CATAAATACCTATTATT AAAA AATAATAGGTATTTATA AAGTGGACTAATTAA TERM 1079 1153887 - 1153854 - R 100 -14.3 -3.68378 | opp_overlap 1153858, overlap 1153852 1153858 TTACATCTTAAAACA TAAATACCTATTATT AAAA AATAATAGGTATTTA TAAAGTGGACTAATT TERM 1080 1153883 - 1153858 - R 100 -10.7 -4.45771 | opp_overlap 1153858, overlap 1153854 1153852 ATCTTAAAACATAAA TACCTATTATT AAAA AATAATAGGTA TTTATAAAGTGGACT TERM 1081 1153858 - 1153883 + r 95 -10.7 -3.89524 | opp_overlap 1153858 1153854 1153852 ATCTTAAAACATAAA TACCTATTATT AAAA AATAATAGGTA TTTATAAAGTGGACT tuf 1155084 - 1153897 - | elongation factor Tu RBE_1065 1155641 - 1156366 + | tRNA/rRNA methyltransferase TERM 1082 1156454 - 1156489 + F 81 -7.1 -4.59882 | opp_overlap 1156457, overlap 1156452 1156457 AATATATGTTTATTA AAATGATAACGTAAA CTACTA TTTGCGTTATCATTG TTCTTTATTTTTTCA TERM 1083 1156457 - 1156486 + F 84 -8.8 -4.32342 | opp_overlap 1156457, overlap 1156454 1156452 ATATGTTTATTAAAA TGATAACGTAAA CTACTA TTTGCGTTATCA TTGTTCTTTATTTTT TERM 1084 1156486 - 1156457 - f 77 -7.3 -4.26344 | opp_overlap 1156457 1156454 1156452 ATATGTTTATTAAAA TGATAACGTAAAC TACT ATTTGCGTTATCA TTGTTCTTTATTTTT RBE_1066 1156567 - 1156956 + | hypothetical protein fumC 1157021 - 1158412 + | fumarate hydratase TERM 1085 1158460 - 1158500 + F 100 -13.1 -3.49618 | opp_overlap 1158460, overlap 1158465 1158473 TTGTACTATACAAAA TATAATAAATAGGCTAATA TAA TATTAGTTTATTTATTATA TTACTTATATGAAGC TERM 1086 1158500 - 1158460 - f 89 -8.7 -4.57353 | opp_overlap 1158460 1158465 1158473 TTGTACTATACAAAA TATAATAAATAGGCTAATA TAA TATTAGTTTATTTATTATA TTACTTATATGAAGC TERM 1087 1158465 - 1158495 + F 80 -8.6 -3.78837 | opp_overlap 1158460, overlap 1158460 1158473 CTATACAAAATATAA TAAATAGGCTAATA TAA TATTAGTTTATTTA TTATATTACTTATAT TERM 1088 1158473 - 1158487 + F 75 -5.8 -4.77442 | opp_overlap 1158460, overlap 1158465 1158460 AATATAATAAATAGG CTAATA TAA TATTAG TTTATTTATTATATT RBE_1068 1158509 - 1158763 + | antitoxin of toxin-antitoxin (TA) system Phd TERM 1089 1158864 - 1158894 + F 84 -8.6 -4.33785 | opp_overlap 1158871, overlap 1158871 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1090 1158871 - 1158887 + F 95 -6.7 -5.77677 | opp_overlap 1158871, overlap 1158864 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1091 1158887 - 1158871 - f 78 -6.7 -4.67755 | opp_overlap 1158864 1158871 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1092 1159017 - 1158998 - f 76 -9.4 -3.06087 | opp_overlap 1158998, overlap 1158989 1158987 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 1093 1158998 - 1159017 + F 75 -9.4 -3.01924 | opp_overlap 1158998 1158989 1158987 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_1069 1159370 - 1160131 + | transposase TERM 1094 1160160 - 1160198 + F 71 -6.7 -3.90316 | gap 1, opp_overlap 1160166, overlap 1160163 GCTTTTCGATCCACG CAACAATG-CCTTCCCGC ATAG GCGGGAATGACATAGTGG TATTTTTCAAGCCAT TERM 1095 1160192 - 1160166 - f 81 -9.5 -3.68569 | gap 1, opp_overlap 1160163 1160160 CGATCCACGCAACAA TGCC-TTCCCGC ATAG GCGGGAATGACA TAGTGGTATTTTTCA TERM 1096 1160575 - 1160595 + G 70 -8.3 -3.04598 | opp_overlap 1160575 1160574 TAAGCATAATAAATG CCATGTTAC ATT GTACCATGG TGTATATAACTTTCT TERM 1097 1160645 - 1160625 - g 83 -6.9 -4.7497 | opp_overlap 1160612 1160625, overlap 1160627 1160644 TGGATTTACCAAAAA TCTCTGCTA AAC TAGCAGATA TAGCTTATAACACAA TERM 1098 1160643 - 1160627 - g 74 -9.5 -2.66218 | opp_overlap 1160625, overlap 1160625 GATTTACCAAAAATC TCTGCTA AAC TAGCAGA TATAGCTTATAACAC RBE_1070 1160441 - 1161025 + | hypothetical protein ftsZ 1161275 - 1162654 + | cell division protein FtsZ TERM 1099 1162803 - 1162790 - f 81 -2.5 -5.80727 | opp_overlap 1162797, overlap 1162793 1162797 AAAAATAATAAAAAA TAATA ATTT TATTA GCCGATAATAAATCG ecoT 1162939 - 1163232 + | ecotin precursor TERM 1100 1163248 - 1163281 + T 85 -10.5 -3.68798 | opp_overlap 1163244 1163248, overlap 1163244 ATAAAACTAAATTTA TATTCAACGTGGGAA CCGC TTTCCACCTTGAATA TTCATTATTTTAAAG TERM 1101 1163337 - 1163296 - T 100 -15.5 -3.62275 | opp_overlap 1163292 1163310, overlap 1163297 1163333 ATTCATTATTTTAAA GCTTCTTTGAAGAATCGTA TTTA TACGATTCTTCAAAGAAAA GAAATTTACTCCTCT TERM 1102 1163336 - 1163297 - T 100 -19 -2.77043 | opp_overlap 1163292 1163310, overlap 1163296 1163333 TTCATTATTTTAAAG CTTCTTTGAAGAATCGTA TTTA TACGATTCTTCAAAGAAA AGAAATTTACTCCTC RBE_1073 1163900 - 1163343 - | NifU-like protein TERM 1103 1164067 - 1164052 - g 76 -6.2 -4.63542 | GATAATTTTGAAAAA CATCAA GAAA TTGATG ATCCAGCCCTGATTA RBE_1074 1163998 - 1164165 + | hypothetical protein ampG2 1165307 - 1164432 - | AmpG TERM 1104 1165761 - 1165741 - R 100 -12.6 -3.07962 | GTCTACATCCTAAGA TCCCGTGG ACAAG CCACGGGA TCTAGAAAAAAGCTA TERM 1105 1165788 - 1165773 - R 71 -3.2 -5.28176 | opp_overlap 1165773 GGGATCTAGAAAAAA GCTAGA TGAA TCGAGC TTTTAGTGCTAGAGG rhlE 1167138 - 1165903 - | ATP-dependent RNA helicase RhlE TERM 1106 1167042 - 1167057 + g 71 -3.2 -5.20783 | opp_overlap 1167033 CAGAACCTGCGATAG CAACCG GAAT CGATTG TTTTTGTATTTCGGT TERM 1107 1167491 - 1167473 - R 85 -7.6 -4.75289 | opp_overlap 1167473 TATTATAAGACAAAA CAAAATAT CTA ATATTTTG TTGTAAAAGGTGACG TERM 1108 1167507 - 1167540 + r 78 -6.1 -4.72986 | overlap 1167509 TTGTAAAAGGTGACG AGGCTATCCAAAATT TGAA AACTTTGGATAGCTG TTTTTGGTACAAATA TERM 1109 1167509 - 1167538 + r 95 -10.9 -3.98256 | overlap 1167507 GTAAAAGGTGACGAG GCTATCCAAAATT TGAA AACTTTGGATAGC TGTTTTTGGTACAAA cspA 1167861 - 1167559 - | cold shock-like protein TERM 1110 1167895 - 1167881 - H 77 -7.2 -4.32048 | CAATAACATGCAAAA GAAAGT ATT ACTTTC TGGGTCTAATTATAT RBE_1078 1168457 - 1168951 + | leucine-rich repeat-containing protein RBE_1079 1169346 - 1169047 - | putative transcriptional regulator RBE_1080 1169574 - 1169356 - | hypothetical protein RBE_1081 1169695 - 1170093 + | hypothetical protein RBE_1082 1170164 - 1170415 + | hypothetical protein RBE_1083 1170449 - 1170742 + | hypothetical protein RBE_1084 1171374 - 1170760 - | tellurite resistance protein-related protein TERM 1111 1171311 - 1171293 - G 77 -9 -3.31598 | opp_overlap 1171290 ATAAATCTAGATTAA TCGTTTTA TCA TAAAACGA CTGTGCATTATTATC TERM 1112 1171525 - 1171536 + H 83 -3 -5.68023 | opp_overlap 1171525 TTAGTTAGAAAAACT TAGT CGAT ACTA TTTTTTTGATTATCA RBE_1085 1171583 - 1172038 + | lysozyme RBE_1086 1172113 - 1172355 + | hypothetical protein TERM 1113 1172376 - 1172403 + T 73 -9.4 -2.55253 | opp_overlap 1172379, overlap 1172366 1172379 1172382 ATAATGCATTGTTTA GAATAAGATTTT TTGT AGAATCTTATTC TAAATTGGCGTTAAT RBE_1087 1172734 - 1172420 - | hypothetical protein TERM 1114 1172580 - 1172566 - GT 77 -10 -2.57132 | overlap 1172565 TCTGTTTTTTACAAG GCGTAG ACT CTACGC TCATGGCTAAAATAT RBE_1088 1173200 - 1172691 - | hypothetical protein TERM 1115 1172852 - 1172864 + gr 73 -7.7 -3.64431 | CATTATATATATTCA GCCAT TTT ATGGC TTCTCTATAATATTC RBE_1089 1174186 - 1173212 - | hypothetical protein TERM 1116 1173617 - 1173635 + g 71 -3.2 -5.14698 | ATTTTTATTAAATTT TGTTAC TACGAAT GTAACA TTTTCTTTTAAATTT TERM 1117 1173709 - 1173729 + g 100 -8.4 -5.32882 | TTGCAATAAAGTTCT CAACAGTT TCATT AACTGTTG TTTTTTGTGGTGCTA pbpC 1176421 - 1174187 - | bifunctional penicillin-binding protein 1C TERM 1118 1175079 - 1175096 + g 86 -11.3 -2.93109 | overlap 1175072 GTTTCAGGTATGTCA TTCCCGC AAAA GCGGGAA TCTAGTAATTTTGTC TERM 1119 1175634 - 1175613 - G 77 -2.9 -5.52384 | TCGTTATTAAAAAAA TTGCTAGAG CCAA CACTTGCAA GTACCTCCATTGTGG TERM 1120 1176725 - 1176694 - R 81 -9.5 -3.62096 | gap 1 TTTTAGTATTTTAAA CTG-GATCCCGTGG ACAAG CCACGGGATGACAG GGGAAACTGATCCAC TERM 1121 1177054 - 1177030 - R 79 -7.2 -4.45544 | CCCGATTAATTAAAA CCACCAAACT ATATA ATTTTGGTGG TCGGGGCGTTCAAAA TERM 1122 1177191 - 1177201 + r 71 -6.8 -3.99805 | TTATGGTTGATACTG CCCA TCT TGGG TTTGGGTTTTTGAAG RBE_1091 1177997 - 1177494 - | hypothetical protein atm1 1179634 - 1178066 - | multidrug resistance protein Atm1 TERM 1123 1179915 - 1179963 + r 76 -6.1 -4.57569 | AAGCTCGATTGCTCT CGCTTTATGCTG-GATCCCGTGG ACAAG CCACGGGATGACATCG-AGAGCG TTTTTCGAGCCATGC grxC1 1180343 - 1180047 - | glutaredoxin GrxC uvrB 1180414 - 1182399 + | excinuclease ABC subunit B gltP 1183607 - 1182402 - | Na+/H+-dicarboxylate symporters TERM 1124 1183394 - 1183372 - G 85 -4.9 -5.52986 | ACTGTAGCAAAAAAA GTAGTACCT AAAAA AGCTACTAC CGCTTTCATGCCTAC cutA 1183972 - 1183658 - | periplasmic divalent cation tolerance protein RBE_1097 1184391 - 1183975 - | putative 6-pyruvoyl tetrahydropterin synthase TERM 1125 1184048 - 1184032 - G 74 -6.7 -4.25016 | ATTAGTAACAAAGAA TTTTTGA CTT TCAAAAA GCTTAGGGAAAATCT sucB 1185614 - 1184412 - | dihydrolipoamide acetyltransferase kgd 1188399 - 1185616 - | alpha-ketoglutarate decarboxylase RBE_1100 1190209 - 1188665 - | thermostable carboxypeptidase TERM 1126 1189828 - 1189845 + g 72 -4.9 -4.75967 | AAACAAGTTCAGCTT TAGTAGT TGCA GCTACTA TTCTTTTTTGTAATT TERM 1127 1190243 - 1190196 - G 80 -10.7 -2.66435 | gap 1, opp_overlap 1190199 1190201, overlap 1190193 AGCTTTATTATATGA TTTCT-CTTTGTCATCCCGTGG TCAAG CCACGGGATGACAAAGTAGTTC CTTAGCCGCCTTTAA TERM 1128 1190199 - 1190240 + g 100 -21.9 -3.34192 | gap 1, opp_overlap 1190196 1190193, overlap 1190201 TTTATTATATGATTT CT-CTTTGTCATCCCGTGGT CAA GCCACGGGATGACAAAGTAG TTCCTTAGCCGCCTT TERM 1129 1190201 - 1190237 + g 100 -24.7 -2.84098 | opp_overlap 1190196 1190193, overlap 1190199 TATTATATGATTTCT CTTTGTCATCCCGTGGT CAA GCCACGGGATGACAAAG TAGTTCCTTAGCCGC recN 1191869 - 1190217 - | DNA repair protein RecN TERM 1130 1190435 - 1190451 + g 76 -6.5 -4.64657 | overlap 1190450 TTATAACTATTACTT GCGTAGC TGA GCTAAGC TTTTTGAGCCTTTCA TERM 1131 1191873 - 1191857 - G 82 -9.5 -3.75332 | opp_overlap 1191859 AGTTTTTAACTGAAA GACTATG AAA CATAGTC TACTCGATGAATTTC comL 1192766 - 1192005 - | DNA uptake lipoprotein TERM 1132 1192991 - 1192951 - R 100 -13.6 -5.49809 | opp_overlap 1192951 1192957, overlap 1192957 TAAATCTTAAAAAAA GAAAAAGTACCCATAAGA GCAAA TCTTATGAGTACTTTATC TTTAGAACTTAAATG TERM 1133 1192951 - 1192991 + r 93 -11.4 -3.61268 | opp_overlap 1192951 1192957, overlap 1192957 TAAATCTTAAAAAAA GAAAAAGTACCCATAAGA GCAAA TCTTATGAGTACTTTATC TTTAGAACTTAAATG TERM 1134 1192957 - 1192985 + r 84 -9 -4.33258 | opp_overlap 1192951 1192957, overlap 1192951 TTAAAAAAAGAAAAA GTACCCATAAGA GCAAA TCTTATGAGTAC TTTATCTTTAGAACT TERM 1135 1192985 - 1192957 - R 100 -11.2 -5.86609 | opp_overlap 1192957 1192951, overlap 1192951 TTAAAAAAAGAAAAA GTACCCATAAGA GCAAA TCTTATGAGTAC TTTATCTTTAGAACT virB2 1193382 - 1193014 - | VirB2-like protein coxC 1194381 - 1193548 - | cytochrome c oxidase subunit III TERM 1136 1193713 - 1193701 - G 72 -4.9 -4.79223 | GCATACTATTAAAAA TATAG TAC CTATA ATTACATGTGCACCA coq7 1195366 - 1194827 - | ubiquinone biosynthesis protein coq7 holA 1196379 - 1195387 - | DNA polymerase III subunit delta RBE_1107 1196867 - 1196376 - | hypothetical protein RBE_1108 1197278 - 1197634 + | hypothetical protein TERM 1137 1197671 - 1197644 - T 100 -14.4 -3.26546 | opp_overlap 1197646, overlap 1197636 TTATAAATCTATCAA TATCATTCCTGT GAAA ACAGGAATGATA TATGAACAATAACGA TERM 1138 1197646 - 1197669 + T 100 -12.6 -2.87931 | opp_overlap 1197644 1197636 ATAAATCTATCAATA TCATTCCTGT GAAA ACAGGAATGA TATATGAACAATAAC RBE_1109 1198014 - 1197688 - | hypothetical protein RBE_1110 1198741 - 1197998 - | ankyrin repeat-containing protein TERM 1139 1198624 - 1198636 + g 71 -7.7 -3.48276 | TAATTTTACTATTTT GCTCA TTT TGAGC TTCTATGCCAAAACC TERM 1140 1199041 - 1199058 + r 100 -4.9 -6.69613 | AATTAGGTGGAGGTA GTAAATC TTCC GATTTGC TTTTTTTTTTTGTAG RBE_1111 1199505 - 1199185 - | hypothetical protein RBE_1112 1201122 - 1199644 - | heat shock protease dnaK 1201198 - 1203093 + | molecular chaperone DnaK TERM 1141 1203315 - 1203303 - g 70 -4.1 -5.0538 | GCTGATCTTAAAAAA GCCTA TCA TAAGC TAGCTAAACAATATC dnaJ 1203237 - 1204367 + | hypothetical protein TERM 1142 1204667 - 1204681 + F 88 -4.3 -5.66868 | opp_overlap 1204667, overlap 1204658 GGTTCAGCTAAAAAA TGCTA TAAGT TAGCA TTTTTTTACTTCCTT TERM 1143 1204681 - 1204667 - f 72 -4.3 -5.08824 | opp_overlap 1204658 1204667 GGTTCAGCTAAAAAA TGCTA TAAGT TAGCA TTTTTTTACTTCCTT chaB 1204771 - 1205034 + | cation transport regulator ChaB TERM 1144 1205172 - 1205159 - g 72 -2.4 -5.46698 | overlap 1205131 TTTAAAATTAAAAAA GTAG CACTTC CTAC CCTTAAAGTTTTTCA RBE_1116 1205090 - 1205785 + | hypothetical protein TERM 1145 1206641 - 1206605 - T 72 -4.7 -4.89852 | opp_overlap 1206615, overlap 1206608 1206609 1206615 CTAGATCCAGAAAAA TAACTAAAAATATCAAT ATT ACTGATATTTTTAACTG GATCCCGTGAATAAA TERM 1146 1206638 - 1206608 - T 89 -8.6 -4.5448 | opp_overlap 1206615, overlap 1206605 1206609 1206615 GATCCAGAAAAATAA CTAAAAATATCAAT ATT ACTGATATTTTTAA CTGGATCCCGTGAAT TERM 1147 1206637 - 1206609 - T 80 -9.9 -3.31603 | opp_overlap 1206615, overlap 1206608 1206605 1206615 ATCCAGAAAAATAAC TAAAAATATCAAT ATT ACTGATATTTTTA ACTGGATCCCGTGAA TERM 1148 1206631 - 1206615 - T 75 -4.5 -5.10004 | opp_overlap 1206615, overlap 1206609 1206608 1206605 AAAAATAACTAAAAA TATCAAT ATT ACTGATA TTTTTAACTGGATCC omp1 1209119 - 1206813 - | Outer membrane protein omp1 TERM 1149 1206840 - 1206864 + g 72 -5.7 -4.40561 | overlap 1206837 AGAAAATCTTAAGTG GAAATGCTGCG TAT CGTCGTATTTC TTCTTTTTAACCGCA RBE_1118 1210269 - 1209211 - | putative membrane-associated zinc metalloprotease TERM 1150 1210158 - 1210172 + g 70 -4.3 -4.74103 | opp_overlap 1210158 CTTTGCCGAAACCTA TCGAA AATTC TTCGA TTTTTACATTAAAGA nusB 1210475 - 1210945 + | transcription antitermination protein NusB rrmJ 1210935 - 1211618 + | ribosomal RNA large subunit methyltransferase J TERM 1151 1212024 - 1212044 + G 71 -9.1 -2.59191 | overlap 1212014 1212023 GTATGGTAGGTACTG TAGCAGTTA CAG TAGCTGCTA ATTCTGAAAATGTAG RBE_1121 1211738 - 1212229 + | hypothetical protein TERM 1152 1212280 - 1212242 - T 70 -8.5 -3.14881 | opp_overlap 1212242 1212246, overlap 1212246 TAAGTTTTCTATCAA TTAAGTAAGGTAAAA TTAAAGTTT CTTTACCTTACTTAA TAATTCCTCTCGCCC RBE_1122 1212713 - 1212273 - | oligoketide cyclase/lipid transport protein RBE_1123 1213015 - 1212809 - | hypothetical protein RBE_1124 1213260 - 1214570 + | hypothetical protein RBE_1125 1214488 - 1215477 + | hypothetical protein TERM 1153 1216015 - 1216051 + F 72 -4.6 -4.88067 | opp_overlap 1216025 CTTGATCGCAGGATC CAGCTTAAAATACTAA AATTA TTAGTATTAAAAGTTG TTTTTCTAGATGCCT TERM 1154 1216328 - 1216345 + F 71 -7.1 -3.78351 | TATGATTTCGGTTTT TCCTTTA TCAT TAAAGGA TTTAGTCGGCTTTAT TERM 1155 1216570 - 1216560 - f 70 -8.2 -3.10245 | GCATCCTAATATAGA GGGC ATT GCCC GTGTGGATCGAAAAG TERM 1156 1217096 - 1217073 - g 74 -6.1 -4.35524 | overlap 1217074 TTCCTAAATCTAAAA CTACTGTGA ATTTAA TCACAGTAA GTGCCAATTCTATAA RBE_1126 1216826 - 1218154 + | hypothetical protein RBE_1127 1218595 - 1218158 - | hypothetical protein TERM 1157 1218290 - 1218278 - G 74 -6.3 -4.386 | TAAGGTTTGAGAAAA TTCTG TTT CAGAA ACTACTAGATTTAAT RBE_1128 1219480 - 1219641 + | MFS-type multidrug resistance protein B TERM 1158 1220674 - 1220648 - g 73 -8 -3.50119 | overlap 1220646 TACCAACTAATAATA TTGCTCTTGGCA ATA TGCCAAGGGAAA AAGTAGGCAATGCGA RBE_1129 1219765 - 1221042 + | MFS-type multidrug resistance protein B TERM 1159 1221298 - 1221277 - g 74 -8.9 -3.07935 | opp_overlap 1221281, overlap 1221281 AGTGCATGCACTCAA TAAATCATC GATT GATGATTTA CACAATGGTAAAATG mnhE 1221032 - 1221346 + | putative monovalent cation/H+ antiporter subunit E pyrH 1221343 - 1222062 + | uridylate kinase frr 1222223 - 1222783 + | ribosome recycling factor TERM 1160 1223037 - 1223023 - g 82 -2.8 -6.00814 | opp_overlap 1223030, overlap 1223025 AAGAAGTAAAAAAAA TAGCAA AGC TTGCAA GGCTTAAATTTGAGG TERM 1161 1223035 - 1223025 - g 71 -5.4 -4.61485 | opp_overlap 1223030, overlap 1223023 GAAGTAAAAAAAATA GCAA AGC TTGC AAGGCTTAAATTTGA gatC 1222995 - 1223297 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 1162 1223555 - 1223576 + G 74 -8.9 -3.07192 | opp_overlap 1223555 1223552 TTTGTACAAAAGGCA TTAGAACAA CTGC TTGTTCTAA TATATTAAGAGAGTT TERM 1163 1223576 - 1223555 - g 73 -8.9 -2.80077 | opp_overlap 1223555, overlap 1223552 TTTGTACAAAAGGCA TTAGAACAA CTGC TTGTTCTAA TATATTAAGAGAGTT gatA 1223299 - 1224780 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1164 1224940 - 1224954 + G 71 -8.6 -2.79842 | overlap 1224938 1224952 TTGATGCGGCAATGC CTGGTA TGT TACCAG TGCTTAATGAGTATT gatB 1224783 - 1226234 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1165 1226310 - 1226258 - f 100 -17.3 -3.06796 | gap 1, overlap 1226296 1226298 TGTCATCCTAGCTAA CTTGATCGCGGGATCTCAGTATAC AGTCTG GAACAC-AAGATCCCGCGATCAAG TTGCGGGATGACATA TERM 1166 1226679 - 1226697 + G 83 -10.4 -3.33261 | opp_overlap 1226676 1226674 1226673 TTCCGATAATTATGC TACAGCAA AAT TTGCTGTA TTATACAGGTTAGAG yqiX 1226362 - 1227087 + | amino acid ABC transporter substrate-binding protein RBE_1137 1227072 - 1227554 + | flavoprotein oxygenase DIM6/NTAB family protein dapB 1227551 - 1228303 + | dihydrodipicolinate reductase RBE_1139 1228347 - 1229060 + | integral membrane protein TERM 1167 1229168 - 1229204 + T 72 -8.1 -3.23598 | opp_overlap 1229163 ACTGTAAGGAGCGTG GCAATCTCATAAAGCAA TAT TTGACTCATGAGATTGC TTCGTCAATTACTTC RBE_1140 1229609 - 1229466 - | hypothetical protein RBE_1141 1229621 - 1230325 + | hypothetical protein RBE_1142 1231087 - 1230446 - | hypothetical protein dapD 1231159 - 1231986 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase RBE_1144 1232157 - 1232498 + | hypothetical protein TERM 1168 1232646 - 1232622 - T 73 -5.7 -4.68528 | opp_overlap 1232621 1232623, overlap 1232623 AAAGCTAAAAAATAA GGAGAGTACGA AGT TAGTACTCTCT ATTTTCAGACTTGTA TERM 1169 1232645 - 1232623 - T 79 -9.2 -3.38677 | opp_overlap 1232621 1232623, overlap 1232622 AAGCTAAAAAATAAG GAGAGTACGA AGT TAGTACTCTC TATTTTCAGACTTGT TERM 1170 1232623 - 1232645 + T 81 -9.2 -3.67402 | opp_overlap 1232623 1232622, overlap 1232621 AAGCTAAAAAATAAG GAGAGTACGA AGT TAGTACTCTC TATTTTCAGACTTGT hemN 1233817 - 1232651 - | coproporphyrinogen III oxidase TERM 1171 1233105 - 1233087 - G 71 -7.6 -3.40403 | opp_overlap 1233086 CCTTTTTTAGCATAA TTAGATAT CTC ATATCTAA AATATTTTTGAGATT RBE_1146 1235027 - 1234197 - | transposase ffh 1236599 - 1235250 - | Signal recognition particle protein TERM 1172 1236268 - 1236306 + g 77 -8.2 -3.91846 | overlap 1236275 GTTTTACCACTACCT TGCAAGCCCACCATTAAA AGA TTTACTGGCGGTTTTGCA TTTAAATTTAGTTTT TERM 1173 1236275 - 1236299 + g 72 -5.7 -4.37198 | overlap 1236268 CACTACCTTGCAAGC CCACCATTAAA AGA TTTACTGGCGG TTTTGCATTTAAATT holB 1237887 - 1237087 - | DNA polymerase III subunit delta' TERM 1174 1237834 - 1237846 + g 74 -4.1 -5.28983 | opp_overlap 1237834 TGCTTCAATAAGCCA GCTAT TAT GTAGC TTTTTATGTTTTAAA TERM 1175 1237974 - 1237955 - R 70 -8.6 -2.69042 | overlap 1237951 ATATTACTAAAGCTA TAGGACTG CTAA CAGTCCCA CGACTGTACCTCAGG hupA 1238349 - 1238023 - | DNA-binding protein HU TERM 1176 1238529 - 1238572 + H 70 -6.3 -4.11692 | AAGATATATATAATT GTATAACTGATGAAAAA AATGTAGCCA TTTTACATCAGTTATGC TTTTAAAGCTGGATA TERM 1177 1238710 - 1238724 + G 72 -2.8 -5.47218 | overlap 1238712 TAAGTTTAGTTATTT TAGTTC TTG GAACAA TTTTTTTCACTAAGC TERM 1178 1239292 - 1239272 - g 74 -9.1 -3.17146 | overlap 1239270 GGTTGCCATAAGAGA GCAGAATAA AGA TTATCCTGC CGGTAACATTAAAAC acrF 1238646 - 1241672 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1179 1241702 - 1241669 - f 70 -3.5 -5.12971 | gap 1, overlap 1241676 AACATTTAAGAAAAA TTAATAATTTGTAAAA TAA TTTTACAAA-TATAAA AATTTCAATGGACAT TERM 1180 1241696 - 1241676 - f 81 -8.5 -4.06335 | overlap 1241669 AAGAAAAATTAATAA TTTGTAAAA TAA TTTTACAAA TATAAAAATTTCAAT RBE_1151 1241805 - 1242041 + | hypothetical protein TERM 1181 1242124 - 1242098 - T 78 -9.7 -3.06302 | opp_overlap 1242098 1242103, overlap 1242100 1242103 ACTATTTTTAGTCAA TATAACAAGAT TCTAT ATCTTGTTATA TTAATAGCTGAATTT TERM 1182 1242098 - 1242124 + T 78 -9.7 -3.19656 | opp_overlap 1242098 1242100 1242103, overlap 1242103 ACTATTTTTAGTCAA TATAACAAGAT TCTAT ATCTTGTTATA TTAATAGCTGAATTT rpoC 1246309 - 1242224 - | DNA-directed RNA polymerase subunit beta' rpoB 1250656 - 1246538 - | DNA-directed RNA polymerase subunit beta TERM 1183 1247480 - 1247500 + g 85 -6.9 -5.06451 | opp_overlap 1247483 TTCTACCTTAGTAGC GAACCTCTT ATT AAGAGCTTC TTTTTTGCCATCATA TERM 1184 1248364 - 1248381 + g 70 -4.1 -5.02074 | AGTTATAAATATCAA CTGAAGG TGCA CTTTCGG TTTTTTGAGCAATAG TERM 1185 1250709 - 1250680 - R 79 -5.2 -5.28176 | CTGACTGATAAAAAA TTAACTATCAAC ATTGAA GTTAACAGTTAA AGAAACTTAATAGAC TERM 1186 1251294 - 1251276 - R 70 -4 -4.92783 | opp_overlap 1251263 AATTTATTATAAAAA TAAAATTA CTT TAATTCTA CTTTTGCTCCAGCAG rplL 1251652 - 1251281 - | 50S ribosomal protein L7/L12 rplJ 1252200 - 1251691 - | 50S ribosomal protein L10 rplA 1253197 - 1252478 - | 50S ribosomal protein L1 rplK 1253637 - 1253203 - | 50S ribosomal protein L11 nusG 1254311 - 1253739 - | transcription antitermination protein NusG secE 1254530 - 1254330 - | preprotein translocase subunit SecE TERM 1187 1254605 - 1254621 + r 70 -8.7 -2.63631 | overlap 1254596 TCGAACCCGCAACCT CCGGTTT TGG AGACCGG TGCTCTACCAATTGA TERM 1188 1254684 - 1254668 - R 85 -4.5 -5.64421 | ATTTTAAATAAAAAA TCAACAA AAT TTATTGA AAACCTTTTTATTTA fusA 1256832 - 1254736 - | elongation factor G TERM 1189 1256026 - 1256044 + g 71 -5.3 -4.66609 | opp_overlap 1256013 1256026, overlap 1256013 TACTACAGCATCAAG TAGAGGC TGTAC GCCTTTA TTTTTAAATGCACTA rpsG 1257326 - 1256835 - | 30S ribosomal protein S7 TERM 1190 1257212 - 1257190 - G 73 -7.8 -3.66874 | TCAATTTTATCGAAA GCAGAATAAA CTA TTTTTTCTGC GAGAGCTTTTTTTCC rpsL 1257741 - 1257352 - | 30S ribosomal protein S12 TERM 1191 1257902 - 1257934 + r 84 -8.6 -4.27686 | opp_overlap 1257908, overlap 1257903 1257908 AAGGTACATACGATG ATTAAAGGGCAAAA ACTAC TTTTGCCCTTTGAA TTTTAAATGATTTTA TERM 1192 1257903 - 1257933 + r 93 -12.1 -3.15527 | opp_overlap 1257908, overlap 1257902 1257908 AGGTACATACGATGA TTAAAGGGCAAAA ACTAC TTTTGCCCTTTGA ATTTTAAATGATTTT TERM 1193 1257908 - 1257928 + r 90 -9.8 -3.9373 | opp_overlap 1257908, overlap 1257903 1257902 CATACGATGATTAAA GGGCAAAA ACTAC TTTTGCCC TTTGAATTTTAAATG TERM 1194 1257928 - 1257908 - R 89 -10.5 -3.81287 | opp_overlap 1257908 1257903 1257902 CATACGATGATTAAA GGGCAAAAA CTA CTTTTGCCC TTTGAATTTTAAATG TERM 1195 1257972 - 1257954 - R 76 -7.6 -3.91434 | opp_overlap 1257946 AAATGATTTTACAAA TGTAAATA ATA TATTTACA CTGTCAAATTAAATT TERM 1196 1258040 - 1258050 + r 78 -4 -5.48787 | GCAAGTATGTTTTAA CTAA CAA TTAG TTTTTTCTCTATTAT yqiY 1258692 - 1258036 - | amino acid ABC transporter permease sdhA 1260761 - 1258971 - | succinate dehydrogenase flavoprotein subunit RBE_1165 1261078 - 1260761 - | toxin of toxin-antitoxin (TA) system ParE TERM 1197 1260956 - 1260970 + g 81 -2.2 -5.9218 | overlap 1260943 TATACATTTATTATG TATTTG AGT TAAATA TTTTTTTGTTATATC RBE_1166 1261304 - 1261068 - | hypothetical protein sdhD 1261699 - 1261322 - | succinate dehydrogenase hydrophobic membrane anchor protein sdhC 1262279 - 1261902 - | succinate dehydrogenase cytochrome b-556 subunit RBE_1169 1263173 - 1262430 - | hypothetical protein htrA 1264886 - 1263348 - | periplasmic serine protease TERM 1198 1263401 - 1263414 + g 74 -5.3 -4.76171 | opp_overlap 1263401, overlap 1263396 CTCTCTCAATCAAAA GCAAA ATAT TTTGC TTTTCTGATTTTTTA hflC2 1265747 - 1264890 - | membrane protease subunit stomatin/prohibitin-like protein TERM 1199 1264953 - 1264968 + g 75 -4.8 -5.00895 | AATAAAATTAGTATC TTCTTT CTTT AAAGAA TTTTTATATACTAAA TERM 1200 1265295 - 1265279 - G 82 -10.9 -2.53233 | opp_overlap 1265276, overlap 1265278 1265276 CAACCACATCAATAC CGAAGCT TTT AGCTTCG CCGTCTACTTGATTT TERM 1201 1265584 - 1265571 - G 74 -3.9 -5.14965 | ACGCTTATCAAAAAA TTCAA CATT TTGAA TTAACGGAACTTTAA hflK 1266957 - 1265947 - | protease activity modulator HflK mrp 1267065 - 1268021 + | hypothetical protein RBE_1174 1268018 - 1269199 + | putative nucleoside-diphosphate-sugar epimerase RBE_1175 1269214 - 1269519 + | nucleotidyltransferase RBE_1176 1269500 - 1269922 + | nucleotidyltransferase substrate binding protein RBE_1177 1270704 - 1270009 - | tRNA/rRNA methyltransferase ruvC 1271179 - 1270706 - | Holliday junction resolvase TERM 1202 1271199 - 1271219 + r 100 -13.3 -2.90956 | ATCCCTACCGTGTCA TCCCGTGGT CCC GCCACGGGA TCTATAAAATGATTT era 1272346 - 1271459 - | GTP-binding protein Era RBE_1180 1272728 - 1272363 - | TPR repeat-containing protein rnc 1273685 - 1273002 - | ribonuclease III lepB 1274560 - 1273685 - | Signal peptidase I nuoF 1275974 - 1274721 - | NADH dehydrogenase I subunit F secF 1277088 - 1276177 - | preprotein translocase subunit SecF RBE_1185 1277161 - 1277397 + | hypothetical protein TERM 1203 1277385 - 1277426 + F 72 -4 -5.06961 | overlap 1277386 1277387 GTTATATAGAGATAC TTTAGGGATTTAAAAT TCTACTACTT ATTTTAAATCCCTAGC TTTATTTTTGTTAAT TERM 1204 1277387 - 1277424 + F 71 -8.8 -2.75415 | overlap 1277386 1277385 TATATAGAGATACTT TAGGGATTTAAAAT TCTACTACTT ATTTTAAATCCCTA GCTTTATTTTTGTTA RBE_1186 1277805 - 1278482 + | hypothetical protein TERM 1205 1278519 - 1278543 + T 100 -11.6 -5.1244 | opp_overlap 1278519 TGTTTAAAGAAAAAA GGCTTAACAA TTCTT TTGTTAAGCC TTTTTGTATTAATAG TERM 1206 1278543 - 1278519 - T 100 -11.6 -5.63517 | opp_overlap 1278519 TGTTTAAAGAAAAAA GGCTTAACAA TTCTT TTGTTAAGCC TTTTTGTATTAATAG lpxA 1279470 - 1278625 - | UDP-N-acetylglucosamine acyltransferase fabZ 1279918 - 1279481 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxD 1280947 - 1279919 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1207 1281648 - 1281630 - g 71 -7.5 -3.54919 | AATTATTGCGGGAAA TCTATCC AAATG GGATAGA TAGGGATTTAATGAT RBE_1190 1281545 - 1281961 + | hypothetical protein TERM 1208 1282048 - 1282062 + T 75 -4.4 -5.18357 | overlap 1282039 GACTTATAAAGATTT TATTTT CAG AAAATA TTTTTTAATAACTTA RBE_1191 1282325 - 1282053 - | cytotoxic translational repressor of toxin-antitoxin (TA) system RelE RBE_1192 1282556 - 1282329 - | antitoxin of toxin-antitoxin (TA) system StbD TERM 1209 1282808 - 1282760 - H 82 -4.4 -5.60993 | opp_overlap 1282763 1282767 1282768, overlap 1282761 GCGTGGATAAAAAAA CGCCCTCGGTGTCATCCCGTGG CTTGT CCACGGGATGACACTCTTAACT ATAAGCTAATTCGTA TERM 1210 1282807 - 1282761 - H 76 -7.9 -3.95873 | opp_overlap 1282763 1282767 1282768, overlap 1282760 CGTGGATAAAAAAAC GCCCTCGGTGTCATCCCGTGG CTTGT CCACGGGATGACACTCTTAAC TATAAGCTAATTCGT TERM 1211 1282767 - 1282802 + H 100 -18.5 -3.12999 | gap 1, opp_overlap 1282761 1282760, overlap 1282763 1282768 TAAAAAAACGCCCTC G-GTGTCATCCCGTGG CTTGT CCACGGGATGACACTC TTAACTATAAGCTAA TERM 1212 1282768 - 1282800 + H 100 -22.2 -3.12505 | opp_overlap 1282761 1282760, overlap 1282763 1282767 AAAAAAACGCCCTCG GTGTCATCCCGTGG CTTGT CCACGGGATGACAC TCTTAACTATAAGCT TERM 1213 1282981 - 1283020 + G 76 -9.7 -2.98786 | overlap 1282974 ATATAATGCTGACTT TTCAGATATTTTATTAG GTAAAG TTAATAAAATATCTGGA TGTGATTCTACTATA RBE_1193 1282778 - 1283107 + | hypothetical protein rssA 1284879 - 1283116 - | putative esterase sodB 1285518 - 1284889 - | superoxide dismutase TERM 1214 1285613 - 1285597 - H 72 -6.7 -4.11092 | overlap 1285595 GAACAACCAAAAAGA CTTATAT CAT ATATAAG CATACTGTATTTGGT RBE_1196 1285767 - 1286369 + | hypothetical protein RBE_1197 1286498 - 1286740 + | hypothetical protein TERM 1215 1287001 - 1286977 - T 76 -9.9 -2.8082 | overlap 1286976 GACCCACGCAACAAT GCCCCCATGGC TTG ACCACGGGGTC CAAAAAAACAACTAA TERM 1216 1287047 - 1287010 - T 85 -5.9 -5.40072 | opp_overlap 1287020, overlap 1287013 1287014 CGGGGTCCAAAAAAA CAACTAAAAATATCAAC ATTT ATTGATATTTTTAACTA GATCTAGTTCCCAAG TERM 1217 1287044 - 1287013 - T 85 -7.6 -4.79949 | opp_overlap 1287020, overlap 1287010 1287014 GGTCCAAAAAAACAA CTAAAAATATCAAC ATTT ATTGATATTTTTAA CTAGATCTAGTTCCC TERM 1218 1287043 - 1287014 - T 76 -8.9 -3.46885 | opp_overlap 1287020, overlap 1287013 1287010 GTCCAAAAAAACAAC TAAAAATATCAAC ATTT ATTGATATTTTTA ACTAGATCTAGTTCC TERM 1219 1287120 - 1287108 - T 76 -9.1 -3.08133 | GATCCACGCAGGCAA TGCCG ACA CGGCA TGACACCGAACGTGC RBE_1198 1288111 - 1287167 - | hypothetical protein dus 1289091 - 1288111 - | putative dihydrouridine synthase Dus TERM 1220 1289810 - 1289786 - H 72 -5.1 -4.69326 | opp_overlap 1289789, overlap 1289789 1289809 ATATTTAACACAAAA TCATTCTCATC ATA GATGAAAATTA GCTTTACAAAACTAC RBE_1200 1289942 - 1290202 + | hypothetical protein RBE_1201 1290199 - 1290672 + | hypothetical protein TERM 1221 1290687 - 1290715 + T 95 -11.7 -3.21695 | ACCAGCGTTGATAGC GGTCGTTACCCGC TAC GCAGTTAACGACC TTAAGTTAATAGTAA folC 1292131 - 1290833 - | folylpolyglutamate synthase TERM 1222 1292210 - 1292197 - R 70 -3.9 -5.10064 | opp_overlap 1292197 CTCAAGATAGAAAAA GATTT AAAA AAATC TTATTGTTGCATGGA TERM 1223 1292282 - 1292310 + r 87 -8.4 -4.73105 | opp_overlap 1292289, overlap 1292289 ACGAAGCAATCTAGT TAAAAAATGCTA TAAAT TAGCATTTTTTG TTATTTTTTCTGGAT TERM 1224 1292303 - 1292289 - R 72 -4.3 -5.10497 | opp_overlap 1292282 1292289 AATCTAGTTAAAAAA TGCTA TAAAT TAGCA TTTTTTGTTATTTTT TERM 1225 1292289 - 1292303 + r 88 -4.3 -5.80727 | opp_overlap 1292289, overlap 1292282 AATCTAGTTAAAAAA TGCTA TAAAT TAGCA TTTTTTGTTATTTTT bioY2 1293017 - 1292466 - | BioY family protein TERM 1226 1293085 - 1293102 + r 73 -5.7 -4.63218 | opp_overlap 1293085 CTCGTTGTCAATAAA CTAAAAT AATT ATTTTAG TTTTCTTCCACAGAA RBE_1204 1293948 - 1293280 - | glutathione S-transferase TERM 1227 1294309 - 1294327 + H 75 -7.4 -4.14392 | TGTTACCAACTTACC GGTGTGCT CTT ACCACACC TTTTCACCCTTACCG TERM 1228 1297112 - 1297128 + G 71 -8.7 -2.82623 | opp_overlap 1297111 1297105 1297112, overlap 1297107 GGAAAAAGCAGCAAC CCTAGCT TAA AGCTGGG TGCTTGTGGCGAGCA ppdK 1294631 - 1297267 + | pyruvate phosphate dikinase TERM 1229 1297822 - 1297806 - g 85 -8.1 -4.66833 | TTTGAACCGGAAAAA GCTAAAA ATA TTTTAGC ATATGCAAATACTTA TERM 1230 1298068 - 1298055 - g 71 -5.3 -4.61916 | ATAAAAAATAAAGAA TTAGC AAAC GCTAA AAAAAACAGTAATTC TERM 1231 1300373 - 1300357 - g 71 -3.1 -5.26316 | TGAGTTTAGAAAAAA TAAAATT ATT AACTTTA AAGGATTCTGTTGAG RBE_1206 1297704 - 1301012 + | hypothetical protein TERM 1232 1301068 - 1301084 + T 73 -9.5 -2.69674 | opp_overlap 1301068 1301071, overlap 1301071 TCTCATGAGTTAATA CAATCTC CCT GAGATTG TCCTGTACTATATCT TERM 1233 1301084 - 1301068 - T 76 -9.5 -3.10796 | opp_overlap 1301068 1301071, overlap 1301071 TCTCATGAGTTAATA CAATCTC CCT GAGATTG TCCTGTACTATATCT polA 1303713 - 1301098 - | DNA polymerase I RBE_1208 1304068 - 1303904 - | transposase RBE_1209 1304859 - 1304035 - | transposase TERM 1234 1305039 - 1305020 - H 75 -9.4 -3.01924 | opp_overlap 1305012 1305008 1305020 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1235 1305020 - 1305039 + H 76 -9.4 -3.06087 | opp_overlap 1305020, overlap 1305012 1305008 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1236 1305110 - 1305122 + H 76 -9.1 -3.18912 | opp_overlap 1305110 TTTCTTTTCTTACAA TGCCG TGG CGGCA TTGGTGCGTGGATCG TERM 1237 1305122 - 1305110 - H 78 -9.1 -3.28712 | opp_overlap 1305110 TTTCTTTTCTTACAA TGCCG TGG CGGCA TTGGTGCGTGGATCG TERM 1238 1305183 - 1305213 + H 84 -8.6 -4.33182 | opp_overlap 1305190, overlap 1305190 GACCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATAC TERM 1239 1305190 - 1305206 + H 95 -6.7 -5.77677 | opp_overlap 1305190, overlap 1305183 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1240 1305206 - 1305190 - H 78 -6.7 -4.67353 | opp_overlap 1305190 1305183 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC RBE_1210 1305567 - 1305986 + | phosphate acetyltransferase Pta RBE_1211 1305892 - 1306620 + | phosphate acetyltransferase Pta ackA 1306622 - 1307641 + | acetate kinase RBE_1213 1307863 - 1308111 + | transcriptional regulator RBE_1214 1308098 - 1308373 + | hypothetical protein RBE_1215 1308318 - 1308680 + | ankyrin repeat-containing protein TERM 1241 1309326 - 1309305 - g 77 -4.5 -5.30686 | AATATGTAGAAAAAA TCGATAATT TAAA AATAATCGA TGATAAGCTATATGA RBE_1216 1308680 - 1309999 + | hypothetical protein trmD 1310132 - 1310980 + | tRNA (guanine-N(1)-)-methyltransferase rplS 1310984 - 1311412 + | 50S ribosomal protein L19 TERM 1242 1311657 - 1311671 + T 85 -2.9 -5.83226 | opp_overlap 1311657 1311645, overlap 1311645 TAATCTAGTAAAAAA TACTA CAAAT TAGTA TTTTTTTATTAGATT RBE_1219 1312018 - 1311680 - | hypothetical protein RBE_1220 1312552 - 1312088 - | ankyrin repeat-containing protein TERM 1243 1312676 - 1312713 + r 70 -5.9 -4.30477 | gap 1, opp_overlap 1312677, overlap 1312677 1312692 TATGCGTTAAATATA AGTAATCAAG-AATTTTG CAA TAAAATTGCTTGATTACC TTTGTCTGTTCTTTG TERM 1244 1312712 - 1312677 - R 80 -8.7 -3.81755 | gap 1, opp_overlap 1312677 1312676 1312692 ATGCGTTAAATATAA GTAATCAAG-AATTTT GCAAT AAAATTGCTTGATTAC CTTTGTCTGTTCTTT TERM 1245 1312677 - 1312712 + r 76 -9.4 -3.16659 | gap 1, opp_overlap 1312677, overlap 1312676 1312692 ATGCGTTAAATATAA GTAATCAAG-AATTTTG CAA TAAAATTGCTTGATTAC CTTTGTCTGTTCTTT RBE_1221 1313638 - 1312709 - | hypothetical protein RBE_1222 1314112 - 1313768 - | hypothetical protein TERM 1246 1314014 - 1314052 + g 95 -10.6 -4.43844 | opp_overlap 1314023, overlap 1314015 1314018 GCTTGTCCACGGGAT CCAGTTAAAGATATCAAT ATT ATTGATATCTTTAGTTGC TTTTCTGGATCCTGC TERM 1247 1314015 - 1314051 + g 100 -14.1 -3.25824 | opp_overlap 1314023, overlap 1314014 1314018 CTTGTCCACGGGATC CAGTTAAAGATATCAAT ATT ATTGATATCTTTAGTTG CTTTTCTGGATCCTG TERM 1248 1314018 - 1314048 + g 95 -12.2 -3.76186 | opp_overlap 1314023, overlap 1314015 1314014 GTCCACGGGATCCAG TTAAAGATATCAAT ATT ATTGATATCTTTAG TTGCTTTTCTGGATC TERM 1249 1314043 - 1314023 - G 86 -9.9 -3.6682 | opp_overlap 1314018 1314015 1314014 CGGGATCCAGTTAAA GATATCAAT ATT ATTGATATC TTTAGTTGCTTTTCT pbpA1 1315961 - 1314177 - | penicillin-binding protein TERM 1250 1314386 - 1314400 + gr 71 -8.6 -2.78032 | opp_overlap 1314397 1314398, overlap 1314385 1314383 1314397 CATTTGCTTTTCCTT GCACTT GAG AAGTGC CTGTTTTACCGGCAA TERM 1251 1314738 - 1314723 - GR 74 -9 -3.16564 | CTTTGATGGTACGAA CCCTGA ACTT TCAGGG GCTAAATCAATACCG RBE_1224 1316472 - 1315936 - | hypothetical protein TERM 1252 1316333 - 1316348 + gr 71 -5.4 -4.58685 | AATATGATTTCTATT GCAGGA AAAA TTCTGC TTTTTACCCCAATTT TERM 1253 1316737 - 1316707 - R 84 -8.6 -4.33182 | opp_overlap 1316714, overlap 1316714 GTATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGGTC TERM 1254 1316714 - 1316730 + r 78 -6.7 -4.67353 | opp_overlap 1316714 1316707 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1255 1316730 - 1316714 - R 95 -6.7 -5.77677 | opp_overlap 1316714, overlap 1316707 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC gpsA 1317786 - 1316842 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1256 1317712 - 1317733 + g 77 -10.1 -2.57344 | opp_overlap 1317711 1317712, overlap 1317706 1317711 AACGTTCTCGCAAAC CCTTGCTGC TATG GCTGCAAGG CTTGTGCCGAAACTC TERM 1257 1317733 - 1317712 - G 77 -10.1 -2.72043 | opp_overlap 1317706 1317712 1317711, overlap 1317711 AACGTTCTCGCAAAC CCTTGCTGC TATG GCTGCAAGG CTTGTGCCGAAACTC TERM 1258 1317917 - 1317901 - H 83 -6.7 -5.08824 | opp_overlap 1317901 GGTCTAGCTAAAAAA TACTAAT ATT ATTAGTA TTTTTTATTGTTTTT TERM 1259 1317901 - 1317917 + H 95 -6.7 -5.80727 | opp_overlap 1317901 GGTCTAGCTAAAAAA TACTAAT ATT ATTAGTA TTTTTTATTGTTTTT TERM 1260 1317938 - 1317958 + H 100 -13.3 -3.28712 | TATTGTTTTTCTGGA TGCCGTGGT CAA GCCACGGCA TTGTAAGAAAAGAAA TERM 1261 1318048 - 1318029 - H 76 -9.4 -3.06087 | opp_overlap 1318029, overlap 1318020 1318018 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 1262 1318029 - 1318048 + H 75 -9.4 -3.01924 | opp_overlap 1318029 1318020 1318018 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_1226 1318206 - 1319162 + | transposase sucD 1320280 - 1319405 - | succinyl-CoA synthetase subunit alpha sucC 1321651 - 1320494 - | succinyl-CoA synthetase subunit beta RBE_1229 1322112 - 1321693 - | putative nucleic-acid-binding protein RBE_1230 1322323 - 1322069 - | transcriptional regulator RBE_1231 1322645 - 1322403 - | cytochrome b561 family protein RBE_1232 1322941 - 1322765 - | cytochrome b561 family protein TERM 1263 1323043 - 1322997 - R 87 -11.1 -3.4252 | gap 2, overlap 1322998 1323000 TGCGAGCGACTACAA GGAGCGTGGCAATCTCATGAAGC AGG ACTCC-TGAGATTGCCACG-TCG ATGCTACGCATCTCC TERM 1264 1323042 - 1322998 - R 100 -14.6 -2.65298 | gap 2, overlap 1322997 1323000 GCGAGCGACTACAAG GAGCGTGGCAATCTCATGAAGC AGG ACTCC-TGAGATTGCCACG-TC GATGCTACGCATCTC TERM 1265 1323041 - 1323000 - R 100 -13.9 -2.86747 | gap 1, overlap 1322998 1322997 GAGCGACTACAAGGA GCGTGGCAATCTCATGAAGC AGG ACTCC-TGAGATTGCCACGT CGATGCTACGCATCT RBE_1233 1325107 - 1323071 - | acylamino-acid-releasing protein TERM 1266 1324206 - 1324222 + g 70 -8.1 -3.15742 | overlap 1324205 TTATCTAATATTTTG TACGATA CCA TATCGTA ATTTATTGATACTGC RBE_1234 1325941 - 1325306 - | hypothetical protein TERM 1267 1326066 - 1326044 - R 71 -5.8 -4.52042 | ATAAAAATTAATAAA TTTTTATACT GGA AATATAAAAA CATTAAGAAATAGTA TERM 1268 1326118 - 1326107 - R 74 -3 -5.45726 | TATAGTTTAAAAAAA TACT AAAA AGTA ACTAAAAGCACTTGA TERM 1269 1326246 - 1326285 + r 85 -11 -3.10636 | opp_overlap 1326259, overlap 1326244 1326240 1326259 TAGGGGACCTAGGGG ACTGTTGTACTAAGTATT TTTA AATACTTAGTACAATGGA TAATTATTGTTTTCA rbfA 1326731 - 1326360 - | ribosome-binding factor A RBE_1236 1327163 - 1326738 - | hypothetical protein TERM 1270 1327517 - 1327529 + G 80 -6.3 -4.90906 | TAACAGTGATAGGTT CCTAT TTT ATAGG TTTTTGGTATTATAA RBE_1237 1327222 - 1327743 + | RDD family protein recR 1327745 - 1328347 + | recombination protein RecR RBE_1239 1328663 - 1328349 - | hypothetical protein RBE_1240 1330444 - 1328612 - | hypothetical protein TERM 1271 1329933 - 1329957 + gH 72 -5.2 -4.73682 | opp_overlap 1329928, overlap 1329930 1329952 AAATAAAAACTGCTT TTTTTAGCAA GAAAG TTGTTAAAAA TTTTATCTTGTAAGC TERM 1272 1330066 - 1330082 + gH 72 -4.5 -4.92239 | opp_overlap 1330066 1330069 CACTAATTTCATAAT CTATAAA CAA TTTATGG TTTTTAAGTTTTTCA TERM 1273 1330382 - 1330394 + gH 70 -3.5 -5.0133 | TTTTCTTTCCATATT TTTTA CAT TAAAA TTTTTTGAACGCATA RBE_1241 1330533 - 1331717 + | hypothetical protein RBE_1242 1332824 - 1331868 - | transposase TERM 1274 1333004 - 1332985 - R 75 -9.4 -3.01924 | opp_overlap 1332977 1332973 1332985 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1275 1332985 - 1333004 + r 76 -9.4 -3.06087 | opp_overlap 1332985, overlap 1332977 1332973 TATGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1276 1333105 - 1333141 + r 86 -9.1 -3.87815 | opp_overlap 1333105, overlap 1333108 1333115 1333117 ACTAGATCCAGAAAA TAATAAATAATACTAAT AAA ATTAGTGTTTTTTATTA TTTATAGAAATAACA TERM 1277 1333141 - 1333105 - R 76 -6.9 -4.45485 | opp_overlap 1333105 1333108 1333115 1333117 ACTAGATCCAGAAAA TAATAAATAATACTAAT AAA ATTAGTGTTTTTTATTA TTTATAGAAATAACA TERM 1278 1333108 - 1333138 + r 70 -6.4 -4.07133 | opp_overlap 1333105, overlap 1333105 1333115 1333117 AGATCCAGAAAATAA TAAATAATACTAAT AAA ATTAGTGTTTTTTA TTATTTATAGAAATA TERM 1279 1333115 - 1333131 + r 90 -4.5 -5.74288 | opp_overlap 1333105, overlap 1333108 1333105 1333117 GAAAATAATAAATAA TACTAAT AAA ATTAGTG TTTTTTATTATTTAT hemK 1334869 - 1333199 - | bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase RBE_1244 1335291 - 1334872 - | toxin of toxin-antitoxin (TA) system TERM 1280 1335000 - 1335020 + g 73 -9.1 -2.90219 | overlap 1335003 AGGTTAAGTTGTGTT CAGTAGCTA GTC TAGCTATTG TATATAAAGATTCTG TERM 1281 1335003 - 1335017 + g 70 -7.2 -3.5947 | overlap 1335000 TTAAGTTGTGTTCAG TAGCTA GTC TAGCTA TTGTATATAAAGATT RBE_1245 1335530 - 1335288 - | antitoxin of toxin-antitoxin (TA) system Phd RBE_1246 1336533 - 1335595 - | ribosomal large subunit pseudouridine synthase RluD subfamily protein RBE_1247 1336548 - 1337336 + | Uracil-DNA glycosylase RBE_1248 1337618 - 1337454 - | transposase RBE_1249 1338409 - 1337585 - | transposase TERM 1282 1338570 - 1338589 + r 76 -9.4 -3.06087 | opp_overlap 1338570, overlap 1338562 1338558 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1283 1338589 - 1338570 - R 75 -9.4 -3.01924 | opp_overlap 1338570 1338562 1338558 TACGCCCGCTTAATA CCCTATAT CATT ATATAGGG TATTAACACTCTCTT TERM 1284 1338719 - 1338697 - R 72 -5 -4.72617 | opp_overlap 1338700, overlap 1338700 CCAGAAAATAATAAA TAATACTAAT TTT ATTAGTATTT TTAACTGGCTCTAGT TERM 1285 1338700 - 1338716 + r 78 -6.7 -4.67755 | opp_overlap 1338697 1338700 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 1286 1338716 - 1338700 - R 76 -6.7 -4.42118 | opp_overlap 1338700, overlap 1338697 GAAAATAATAAATAA TACTAAT TTT ATTAGTA TTTTTAACTGGCTCT TERM 1287 1338902 - 1338914 + r 75 -4.9 -5.07652 | ATATACTGCTTGTAT TTCAA GAA TTGAA TTTTATTTTAACAAG RBE_1250 1339210 - 1339013 - | putative inorganic polyphosphate/ATP-NAD kinase RBE_1251 1339781 - 1339227 - | putative inorganic polyphosphate/ATP-NAD kinase TERM 1288 1339777 - 1339787 + g 70 -4 -5.04249 | GCTATTTTATTCATA TTCA TTG TGAA TTTCTTTTTTAAAGA TERM 1289 1340369 - 1340391 + G 80 -7.1 -4.66163 | opp_overlap 1340367 1340369 CATGAAGTAAAACCA GGAGGTAAA ATAGA TTTATCTCC TTTTTCGCTGGAAAT TERM 1290 1341438 - 1341419 - g 70 -4.3 -4.7497 | gap 1, opp_overlap 1341429 GTGATTGATCAAAAA GGC-TTGC TTGCC GCAAAGCC GATATTATCTATGCC RBE_1252 1339985 - 1341667 + | putative hydrolase TERM 1291 1341650 - 1341674 + F 79 -7.3 -4.47456 | ATAATAGTTAATATC GAAAAAGCTAT AGA GTAGTTTTTTC TTTCTTATTCCATGT TERM 1292 1341939 - 1341922 - f 76 -9.9 -2.85351 | TCGCTTTATACTAGA TTCCTGC TTTC GCAGGAA TGACATCGGAATCAC TERM 1293 1342079 - 1342044 - f 79 -5.1 -5.31456 | gap 1, opp_overlap 1342054, overlap 1342047 1342054 GCAATCCAGAAAAAA TAAT-AAAAAATGCTA TAAAT TAGCATTTTTTAACTA AATTACTTTGTAATT TERM 1294 1342075 - 1342047 - f 100 -10.6 -4.73105 | opp_overlap 1342054, overlap 1342044 1342054 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA ACTAAATTACTTTGT TERM 1295 1342068 - 1342054 - f 88 -4.3 -5.80727 | opp_overlap 1342054, overlap 1342047 1342044 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTAACTAAATT TERM 1296 1342054 - 1342068 + F 72 -4.3 -5.10497 | opp_overlap 1342047 1342044 1342054 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTAACTAAATT TERM 1297 1342381 - 1342365 - g 85 -8.1 -4.66833 | opp_overlap 1342364 1342373, overlap 1342373 1342375 TTTGAACCGGAAAAA GCTAAAA ATA TTTTAGC ATATGCTAAAACATA TERM 1298 1342394 - 1342373 - g 83 -6.7 -4.92239 | opp_overlap 1342364 1342373, overlap 1342365 1342375 GGAAAAAGCTAAAAA TATTTTAGC ATAT GCTAAAACA TATAATTCTAATTTA TERM 1299 1342392 - 1342375 - g 74 -7.1 -4.05905 | opp_overlap 1342364 1342373, overlap 1342365 1342373 AAAAAGCTAAAAATA TTTTAGC ATAT GCTAAAA CATATAATTCTAATT TERM 1300 1342621 - 1342608 - g 71 -5.3 -4.61916 | ATAAAAAATAAAGAA TTAGC AAAC GCTAA AAAAAGCAGTAATTC RBE_1253 1342263 - 1343594 + | hypothetical protein RBE_1254 1344488 - 1345222 + | hypothetical protein TERM 1301 1345385 - 1345361 - T 70 -8.6 -2.54193 | TAGTATTTTAAGCTA GATCCCGCAA TCAAG TTGCGGGATG ACAGAGGAAAAACTG fabI 1346326 - 1345538 - | enoyl-(acyl carrier protein) reductase TERM 1302 1346465 - 1346428 - H 93 -8.9 -4.89852 | gap 1, opp_overlap 1346438, overlap 1346438 CTAGATCCAGAAAAA CAA-TAAAAAATACTAAT AAT ATTAGTATTTTTTAGCTG GACCCCGTGGTCAAG TERM 1303 1346454 - 1346438 - H 95 -6.7 -5.80727 | opp_overlap 1346438, overlap 1346428 AAAAACAATAAAAAA TACTAAT AAT ATTAGTA TTTTTTAGCTGGACC TERM 1304 1346438 - 1346454 + H 83 -6.7 -5.08824 | opp_overlap 1346438 1346428 AAAAACAATAAAAAA TACTAAT AAT ATTAGTA TTTTTTAGCTGGACC lnt 1346589 - 1348088 + | apolipoprotein N-acyltransferase RBE_1257 1348138 - 1348698 + | hypothetical protein TERM 1305 1348869 - 1348841 - f 100 -10.6 -4.4831 | opp_overlap 1348848, overlap 1348848 ATCTAGGAAAAATAA TAAAAAATGCTA TAAGT TAGCATTTTTTA GCTGGATCCCGTGAA TERM 1306 1348848 - 1348862 + F 72 -4.3 -5.09895 | opp_overlap 1348848 1348841 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAGCTGGATC TERM 1307 1348862 - 1348848 - f 88 -4.3 -5.80727 | opp_overlap 1348848, overlap 1348841 AAAAATAATAAAAAA TGCTA TAAGT TAGCA TTTTTTAGCTGGATC TERM 1308 1349749 - 1349787 + G 87 -10.4 -3.72576 | overlap 1349752 CGGTCTTGCAGTTGG GGAGGGGCAAGAACTT ATGTTTA AAGTTCTTGCCCCTGA TTTCCTACCGCAAAA TERM 1309 1349752 - 1349784 + G 100 -16.5 -2.96695 | overlap 1349749 TCTTGCAGTTGGGGA GGGGCAAGAACTT ATGTTTA AAGTTCTTGCCCC TGATTTCCTACCGCA tgt 1349090 - 1350169 + | queuine tRNA-ribosyltransferase RBE_1259 1350153 - 1350470 + | hypothetical protein gcp 1350467 - 1351492 + | O-sialoglycoprotein endopeptidase TERM 1310 1351575 - 1351560 - T 74 -7.6 -3.84674 | opp_overlap 1351560 ATGGGATGACAAGAA CCGAAA ACGC TTTCGG TGTCATCCCGTGGCT TERM 1311 1351644 - 1351614 - T 84 -8.6 -4.33785 | opp_overlap 1351621, overlap 1351621 AGATCCAGAAAATAA TAAAAAATACTAAT TTT ATTAGTATTTTTAA CTGGATCCCGTGAAT TERM 1312 1351637 - 1351621 - T 95 -6.7 -5.77677 | opp_overlap 1351621, overlap 1351614 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1313 1351621 - 1351637 + T 78 -6.7 -4.67353 | opp_overlap 1351621 1351614 GAAAATAATAAAAAA TACTAAT TTT ATTAGTA TTTTTAACTGGATCC TERM 1314 1351700 - 1351718 + T 75 -4.4 -5.31059 | opp_overlap 1351700 1351701, overlap 1351701 GATCCACATAACAAA GCCGCCAC GGG GTGACGGA TTTTTTACTTCATAT TERM 1315 1351718 - 1351700 - T 76 -6.6 -4.39998 | opp_overlap 1351700 1351701, overlap 1351701 GATCCACATAACAAA GCCGCCAC GGG GTGACGGA TTTTTTACTTCATAT TERM 1316 1351701 - 1351717 + T 74 -7.9 -3.77008 | opp_overlap 1351700 1351701, overlap 1351700 ATCCACATAACAAAG CCGCCAC GGG GTGACGG ATTTTTTACTTCATA TERM 1317 1351717 - 1351701 - T 80 -10.1 -3.23276 | opp_overlap 1351701 1351700, overlap 1351700 ATCCACATAACAAAG CCGCCAC GGG GTGACGG ATTTTTTACTTCATA virB6-5 1355196 - 1351723 - | VirB6 TERM 1318 1353078 - 1353093 + g 84 -6.2 -5.13343 | GCATATTAACGTCTT TATGGT CTAT ACCATA TTTTCTTTTAACTTC virB6-4 1358026 - 1355366 - | VirB6 TERM 1319 1357029 - 1357061 + g 77 -8.7 -3.61894 | CCACCGCTAGTTGCT TGATAATACATAAAA CCA TTCTGTGTATTATCA TTATTAACAAAGCTT virB6-3 1360900 - 1358033 - | VirB6 virB6-2 1362928 - 1360907 - | VirB6 virB6-1 1366034 - 1362915 - | VirB6 TERM 1320 1365893 - 1365907 + g 74 -8.6 -3.27164 | ATAAGTCACCGACTC CTTGTG TTT CACAAG TTAAATTCTGTAGTG TERM 1321 1366109 - 1366137 + r 70 -5.6 -4.28115 | gap 1, opp_overlap 1366116, overlap 1366116 GACGAAGCAATCCAG TAAAA-AATGCTA ATTT TAGCATTTTTTTA TTATTTCTTCTGGAT TERM 1322 1366129 - 1366116 - R 79 -5.3 -5.18357 | opp_overlap 1366109 1366116 CAATCCAGTAAAAAA TGCTA ATTT TAGCA TTTTTTTATTATTTC TERM 1323 1366116 - 1366129 + r 93 -5.3 -6.01369 | opp_overlap 1366116, overlap 1366109 CAATCCAGTAAAAAA TGCTA ATTT TAGCA TTTTTTTATTATTTC virB4-1 1368645 - 1366228 - | VirB4 TERM 1324 1368765 - 1368795 + H 84 -8.6 -4.33785 | opp_overlap 1368772, overlap 1368772 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1325 1368772 - 1368788 + H 95 -6.7 -5.77677 | opp_overlap 1368772, overlap 1368765 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1326 1368788 - 1368772 - H 78 -6.7 -4.67755 | opp_overlap 1368772 1368765 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1327 1368899 - 1368918 + H 75 -9.4 -3.01924 | opp_overlap 1368890 1368888 1368899 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 1328 1368918 - 1368899 - H 76 -9.4 -3.06087 | opp_overlap 1368899, overlap 1368890 1368888 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_1267 1369076 - 1370032 + | transposase RBE_1268 1371159 - 1370092 - | hypothetical protein TERM 1329 1371171 - 1371183 + r 78 -6.3 -4.8048 | overlap 1371169 TCAAACTAGTATTTT GTTTG TGA CAAAC TTTTTCCTCTACAAA RBE_1269 1372240 - 1371242 - | hypothetical protein TERM 1330 1372438 - 1372428 - R 70 -8.2 -3.14998 | overlap 1372427 GATCTACGAATAAAG CCCG CCA CGGG ATGACACAGAGGGTG TERM 1331 1372610 - 1372593 - R 86 -2.7 -6.0427 | opp_overlap 1372593 1372593, overlap 1372594 AGTATATAAAAAAAA GCTTTAG AAAA CTAAAGA CTCTTTTCTTAGGTT TERM 1332 1372609 - 1372594 - R 72 -6.2 -4.20122 | opp_overlap 1372593 1372593, overlap 1372593 GTATATAAAAAAAAG CTTTAG AAAA CTAAAG ACTCTTTTCTTAGGT RBE_1270 1373399 - 1372650 - | hypothetical protein TERM 1333 1373521 - 1373479 - R 79 -7.3 -4.47271 | opp_overlap 1373479 TAAATCTAATGAAAA TAGTTCCAAGTAATAGAAA AGTTA TTTTAATTACTTGAAACTA TTAAATATTGCTTAT RBE_1271 1374230 - 1373544 - | putative outer surface protein fdxA 1374719 - 1374396 - | ferredoxin ccmC 1375416 - 1374724 - | Heme exporter protein C TERM 1334 1375543 - 1375573 + H 84 -8.6 -4.33785 | opp_overlap 1375550, overlap 1375550 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1335 1375550 - 1375566 + H 95 -6.7 -5.77677 | opp_overlap 1375550, overlap 1375543 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1336 1375566 - 1375550 - H 78 -6.7 -4.67755 | opp_overlap 1375550 1375543 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1337 1375696 - 1375677 - H 76 -9.4 -3.06087 | opp_overlap 1375677, overlap 1375668 1375666 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA TERM 1338 1375677 - 1375696 + H 75 -9.4 -3.01924 | opp_overlap 1375677 1375668 1375666 AAGAGAGTGTTAATA CCCTATAT AATG ATATAGGG TATTAAGCGGGCATA RBE_1274 1375854 - 1376810 + | transposase virB3 1377199 - 1376912 - | VirB3 argB 1378187 - 1377255 - | acetylglutamate kinase TERM 1339 1377928 - 1377952 + gr 72 -6.6 -4.07568 | opp_overlap 1377915 1377928 1377922, overlap 1377915 GATAGATTACCTAAA TCTATATGGT CATGT ACTATATAGA TTTTAGCACCGCACA RBE_1277 1378773 - 1378135 - | GTPase EngB TERM 1340 1378890 - 1378923 + r 82 -6.4 -5.31456 | gap 1, opp_overlap 1378889 1378892 1378899, overlap 1378892 1378899 GACGAAGCAAGGAAG TA-TAAAAAATGCTA ATTTA TAGCATTTTTTATTA TTTTTTCTAGATTGC TERM 1341 1378892 - 1378920 + r 100 -10.6 -4.73105 | opp_overlap 1378889 1378892 1378899, overlap 1378890 1378899 CGAAGCAAGGAAGTA TAAAAAATGCTA ATTTA TAGCATTTTTTA TTATTTTTTCTAGAT TERM 1342 1378920 - 1378892 - R 78 -10.6 -2.87354 | opp_overlap 1378892 1378890 1378899, overlap 1378889 1378899 CGAAGCAAGGAAGTA TAAAAAATGCTA ATTTA TAGCATTTTTTA TTATTTTTTCTAGAT TERM 1343 1378899 - 1378913 + r 88 -4.3 -5.80727 | opp_overlap 1378892 1378889 1378899, overlap 1378892 1378890 AGGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 1344 1378913 - 1378899 - R 78 -4.3 -5.38249 | opp_overlap 1378899 1378892 1378890, overlap 1378892 1378889 AGGAAGTATAAAAAA TGCTA ATTTA TAGCA TTTTTTATTATTTTT TERM 1345 1379251 - 1379287 + r 100 -11.3 -4.4715 | opp_overlap 1379254 1379261, overlap 1379254 1379261 TTTATTCAGGGGATC CAATTAAAAATACTAAT AAA ATTAGTATTTTTAATTA TTTTCTGGATTGCCA TERM 1346 1379284 - 1379254 - R 100 -13 -3.06915 | opp_overlap 1379254 1379251 1379261, overlap 1379261 ATTCAGGGGATCCAA TTAAAAATACTAAT AAA ATTAGTATTTTTAA TTATTTTCTGGATTG TERM 1347 1379254 - 1379284 + r 100 -13 -4.34789 | opp_overlap 1379254 1379261, overlap 1379251 1379261 ATTCAGGGGATCCAA TTAAAAATACTAAT AAA ATTAGTATTTTTAA TTATTTTCTGGATTG TERM 1348 1379261 - 1379277 + r 83 -6.7 -5.07971 | opp_overlap 1379254 1379261, overlap 1379254 1379251 GGATCCAATTAAAAA TACTAAT AAA ATTAGTA TTTTTAATTATTTTC TERM 1349 1379277 - 1379261 - R 82 -6.7 -4.88407 | opp_overlap 1379261 1379254 1379251, overlap 1379254 GGATCCAATTAAAAA TACTAAT AAA ATTAGTA TTTTTAATTATTTTC rpmE 1379660 - 1379421 - | 50S ribosomal protein L31 rpmB 1379950 - 1379657 - | 50S ribosomal protein L28 TERM 1350 1380090 - 1380056 - R 86 -9.7 -3.85909 | gap 1, opp_overlap 1380056 TTACTTAAATTCAAA TAGATAAAGAGAATAA AGCC TTAT-CTCTTTATCTA TTTTGTTCTACAAAT TERM 1351 1380056 - 1380090 + r 100 -9.7 -4.77567 | gap 1, opp_overlap 1380056 TTACTTAAATTCAAA TAGATAAAGAGAATAA AGCC TTAT-CTCTTTATCTA TTTTGTTCTACAAAT sca2 1382827 - 1380098 - | cell surface antigen Sca2 TERM 1352 1382700 - 1382710 + g 79 -6.8 -4.57581 | overlap 1382691 GGTGGTGGAGGTGGT GCAG CTT CTGC TTTATTATTTAAAGT TERM 1353 1383310 - 1383293 - g 72 -5.7 -4.35693 | opp_overlap 1383290 1383293, overlap 1383290 AAAGTTACAAAAGAA TTTCATA CGAA TATGAAA TATCTATTTTGTTTA TERM 1354 1383611 - 1383600 - g 76 -7.2 -4.21098 | overlap 1383588 ATATGAACTTCAAAA GCCC ATGG GGGC TAGGGCGTCCCGGCT cysS 1382999 - 1384375 + | cysteinyl-tRNA synthetase TERM 1355 1385412 - 1385400 - g 72 -4.9 -4.84761 | ACATGGTGATAAAAA TTTAG CTC CTAAA AATGTTTCTAAATTA rpsB 1384651 - 1385526 + | 30S ribosomal protein S2 TERM 1356 1386475 - 1386462 - g 79 -2.4 -5.84381 | GCAGGAAGAAAAAAA CTTC GCCGAT GAAG TAGCCGCTGTAATGA tsf 1385569 - 1386498 + | elongation factor Ts TERM 1357 1387655 - 1387644 - g 71 -3 -5.1675 | TGAGTTACTAAAAAA TCAA CCTT TTGA GGTTTCAGATGTACA TERM 1358 1387856 - 1387846 - g 70 -4 -5.12172 | CAGGAAGAAATAAAA GATT TTG AATC CGCTTTGAAAAAATA TERM 1359 1387910 - 1387893 - g 77 -4.2 -5.37043 | opp_overlap 1387893 ACTTCAGAGAAAAAA GTTTGA TATGGC TCAAAC TAATTTGAAAAAAGA RBE_1284 1387039 - 1388004 + | hypothetical protein TERM 1360 1388010 - 1387998 - f 82 -7.7 -4.5187 | opp_overlap 1388000, overlap 1388000 1388001 1388008 CGTAAAAAAATTAAA GAGCT GAA AGCTC AGCTTCCTGAATCTC RBE_1285 1388157 - 1388819 + | hypothetical protein RBE_1286 1389240 - 1388806 - | putative P-loop hydrolase RBE_1287 1390486 - 1389950 - | transcriptional regulator dsbG 1390673 - 1391452 + | protein-disulfide isomerase TERM 1361 1391507 - 1391493 - g 70 -7.2 -3.62002 | overlap 1391489 TAAGACAAGAATTAA TCAGTT AAA AACTGA TAAAACCCCTAATTC RBE_1289 1391452 - 1391715 + | hypothetical protein atpB 1391720 - 1392448 + | F0F1 ATP synthase subunit A atpE 1392481 - 1392705 + | F0F1 ATP synthase subunit C atpX 1392724 - 1393197 + | F0F1 ATP synthase subunit B' atpF 1393200 - 1393673 + | F0F1 ATP synthase subunit B TERM 1362 1393820 - 1393850 + T 84 -8.6 -4.33785 | opp_overlap 1393827, overlap 1393827 ATGAACTAGAGCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTGGATCT TERM 1363 1393843 - 1393827 - T 78 -6.7 -4.67755 | opp_overlap 1393820 1393827 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1364 1393827 - 1393843 + T 95 -6.7 -5.77677 | opp_overlap 1393827, overlap 1393820 AGAGCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC queF 1395016 - 1394195 - | 7-cyano-7-deazaguanine reductase czcR 1395902 - 1395189 - | transcriptional activator protein CzcR secB 1396592 - 1396134 - | preprotein translocase subunit SecB TERM 1365 1396552 - 1396566 + g 73 -7.8 -3.68908 | opp_overlap 1396552 1396550 1396553, overlap 1396553 GCATTAACAGAAATA TGAGGC ATT GCCTCG TTTGCATCGGTATTT TERM 1366 1396565 - 1396553 - G 73 -9.1 -2.82253 | opp_overlap 1396552 1396553, overlap 1396552 1396550 CATTAACAGAAATAT GAGGC ATT GCCTC GTTTGCATCGGTATT TERM 1367 1396553 - 1396565 + g 73 -9.1 -2.80622 | opp_overlap 1396553 1396552 1396550, overlap 1396552 CATTAACAGAAATAT GAGGC ATT GCCTC GTTTGCATCGGTATT dcd 1397291 - 1396725 - | deoxycytidine triphosphate deaminase RBE_1298 1397586 - 1398896 + | hypothetical protein TERM 1368 1399073 - 1399089 + T 90 -6.7 -5.54403 | opp_overlap 1399073 1399072 AATCCAGCTAAAAAG TACTAAT AAT ATTAGTA TTTTTATTATTTTTT iscA1 1399509 - 1399177 - | Iron-sulfur cluster assembly accessory protein RBE_1300 1399723 - 1400013 + | endonuclease dgt 1400205 - 1401356 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein argS 1401366 - 1403096 + | arginyl-tRNA synthetase TERM 1369 1403185 - 1403195 + F 88 -4 -5.72254 | opp_overlap 1403185, overlap 1403178 GGATCCAGTTAAAAA TACT ATT AGTA TTTTTTATTATTTGC TERM 1370 1403409 - 1403396 - g 74 -3.1 -5.35224 | opp_overlap 1403397, overlap 1403397 CCTACAAAAATAAAA CCTAC TAAA GTAGA AGATATTATGCCATC RBE_1303 1403258 - 1403944 + | hypothetical protein RBE_1304 1403993 - 1404256 + | hypothetical protein TERM 1371 1405079 - 1405067 - g 74 -6.3 -4.44915 | TAATTATTGATAAAA GTGAT GTT ATCAC TAGTGCCTATATGAC parC 1404394 - 1406604 + | DNA topoisomerase IV subunit A TERM 1372 1406690 - 1406720 + T 88 -8.6 -4.47491 | opp_overlap 1406697, overlap 1406697 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTTCTTGATCT TERM 1373 1406697 - 1406713 + T 95 -6.7 -5.77677 | opp_overlap 1406697, overlap 1406690 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC TERM 1374 1406713 - 1406697 - T 78 -6.7 -4.67353 | opp_overlap 1406697 1406690 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTTC nth 1407826 - 1406879 - | endonuclease III TERM 1375 1408013 - 1407989 - H 74 -8.6 -3.33162 | overlap 1407991 1408003 CATTCTATGGCACAA GATCCCGTGA TCAAG TCACGGGATG ACAATATAATTGACT TERM 1376 1408011 - 1407991 - H 93 -11.2 -3.23393 | overlap 1407989 1408003 TTCTATGGCACAAGA TCCCGTGA TCAAG TCACGGGA TGACAATATAATTGA RBE_1307 1408082 - 1408723 + | Serine esterase TERM 1377 1408797 - 1408785 - f 72 -7.7 -3.62046 | overlap 1408789 GGACCCCGTGAACAA GTCAC GGG GTGAC ACCGAGGACGTTTTT glyA 1408884 - 1410146 + | serine hydroxymethyltransferase lipA 1410139 - 1411206 + | lipoyl synthase RBE_1310 1411285 - 1411836 + | putative metalloprotease TERM 1378 1411852 - 1411842 - f 86 -2.6 -6.01187 | AATTAAATAAAAAAA TTTA TGT TAAA ATCTTCAAAAAAAGA tlyC 1411845 - 1412750 + | hemolysin C TERM 1379 1413280 - 1413293 + G 70 -3.9 -5.01535 | opp_overlap 1413280, overlap 1413276 AATGAATCACATGAA CTAAA GTGG TTTAG TTTTTCTGATTATCC RBE_1312 1412734 - 1413372 + | (di)nucleoside polyphosphate hydrolase-like protein TERM 1380 1413551 - 1413570 + T 80 -2.3 -5.71983 | AAATTATACATCGCT TATTTAA CACAAT TTAAATA TTTTTTTATAATTGC RBE_1313 1414573 - 1414109 - | putative integral membrane protein RBE_1314 1414890 - 1414573 - | putative oxidoreductase protein TERM 1381 1414809 - 1414783 - G 71 -6.6 -3.99444 | opp_overlap 1414781 1414783 AATAATATCCATAAA GCAGCTTCCATA TAA TATGTAAGGTGC TATTTGCTTATTAAA RBE_1315 1415412 - 1414951 - | putative oxidoreductase protein RBE_1316 1415776 - 1415333 - | putative oxidoreductase protein RBE_1317 1416712 - 1416002 - | putative aspartyl protease TERM 1382 1416716 - 1416751 + r 72 -4.2 -5.10877 | opp_overlap 1416725, overlap 1416717 1416725 AAAGTATAACAATTA ATATCAAAAGTGGAAG CCGC CTTTTATTTTTGATAC TTTTTAATTTATTCT TERM 1383 1416717 - 1416750 + r 72 -7.7 -3.64086 | opp_overlap 1416725, overlap 1416716 1416725 AAGTATAACAATTAA TATCAAAAGTGGAAG CCGC CTTTTATTTTTGATA CTTTTTAATTTATTC TERM 1384 1416780 - 1416793 + r 72 -6.7 -4.06687 | opp_overlap 1416779 1416780 CTTTTCTATAAAAAG GTGCA GAAA TGCAC TTCTTTATAGAAAAT glnQ 1417520 - 1416798 - | glutamine ABC transporter ATP-binding protein phnP 1418288 - 1417524 - | beta-lactamase superfamily hydrolase TERM 1385 1418390 - 1418404 + G 71 -2.2 -5.51078 | ATCGGGCTGTTTGCC TATTTT TTA AGAATA TTTTCTTTTTGTTTT RBE_1320 1418303 - 1418980 + | hypothetical protein RBE_1321 1419087 - 1420169 + | putative permeases RBE_1322 1423045 - 1420286 - | hypothetical protein TERM 1386 1421759 - 1421775 + g 83 -5.9 -5.14163 | TACTTCTATAGGGCT TATTGCT TCT GGCAATA TTTTTCTTGGTAAAT TERM 1387 1422617 - 1422635 + g 71 -3 -5.29716 | TGGATTATTGTCAAT GATTTGGC TAT GCCTTATC TTTTTATTATGTTCA TERM 1388 1423035 - 1423055 + g 74 -9.1 -3.05844 | opp_overlap 1423035 GCATTTTCTGTATAA TGAAAATCC ATG GGGTTTTCA TATTGACCTGGAAGA RBE_1323 1423802 - 1423233 - | hypothetical protein obgE 1424848 - 1423862 - | GTPase ObgE TERM 1389 1424338 - 1424327 - G 70 -4.4 -4.88736 | opp_overlap 1424314 TACTACCGATAAAAA GGTA GATT TACC GGCATTAGGAAGCCC gltA 1426267 - 1424960 - | type II citrate synthase RBE_1326 1426829 - 1426311 - | hypothetical protein TERM 1390 1426426 - 1426436 + g 77 -4 -5.51046 | TTATACAATTTTATC TCTT GGT AAGA TTTTTTATATATTTG RBE_1327 1427598 - 1427257 - | HicB-like protein RBE_1328 1427672 - 1428304 + | transposase RBE_1329 1428291 - 1428455 + | transposase RBE_1330 1429132 - 1428548 - | ABC-type transporter vacJ 1429911 - 1429144 - | VacJ lipoprotein precursor RBE_1332 1430921 - 1429908 - | hypothetical protein TERM 1391 1430551 - 1430588 + g 79 -6.7 -4.59653 | gap 1, opp_overlap 1430563 1430564 1430577, overlap 1430554 ACAGGTATTTCGGTA GCA-TTTTTATAATTTTT CAA AAAATTTATAAAAATTGC TTTATATTTTTCATT TERM 1392 1430554 - 1430584 + g 70 -7.2 -3.76387 | opp_overlap 1430563 1430564 1430577, overlap 1430551 GGTATTTCGGTAGCA TTTTTATAATTTTT CAA AAAATTTATAAAAA TTGCTTTATATTTTT aatA 1431206 - 1432405 + | aspartate aminotransferase TERM 1393 1432495 - 1432532 + F 70 -8.5 -3.17075 | gap 1 TATTTGTATTTTATA TTGCTG-GATCCCGTGGT CAA GCCACGGGATGACACCAA TTCACTTGCACGGGA RBE_1334 1432567 - 1433223 + | hypothetical protein TERM 1394 1434082 - 1434060 - g 71 -7.8 -3.47345 | AACTGCATAGCACAA GATTTATCAG CTA CTGCTAAATC ACAGAATGACTTACC kdtA 1433220 - 1434476 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 1395 1434543 - 1434561 + F 72 -6.1 -4.208 | overlap 1434548 AATGATTAAATAGCC TTACTTG AATTA CAAGTAA TTTATCATTTTAAAG TERM 1396 1434688 - 1434667 - g 80 -5.9 -4.95618 | AATATGAAAAACAAA GAAGAAATG GCGG CAATTCTTC TAGTAATGATGGAGA RBE_1336 1434588 - 1435028 + | hypothetical protein RBE_1337 1435025 - 1435585 + | hypothetical protein TERM 1397 1435610 - 1435653 + F 79 -9.2 -3.52113 | opp_overlap 1435610 1435623, overlap 1435607 1435611 1435623 CTATTTATTTAAAAT CTGAATATAAAAGGTGGAAA CCGC TTTTCGTCTTTTATATTCAA TATTTCTAACCGAAT TERM 1398 1435611 - 1435652 + F 100 -12.7 -2.70946 | opp_overlap 1435610 1435623, overlap 1435610 1435607 1435623 TATTTATTTAAAATC TGAATATAAAAGGTGGAAA CCGC TTTTCGTCTTTTATATTCA ATATTTCTAACCGAA prs 1435701 - 1436546 + | ribose-phosphate pyrophosphokinase alr 1436569 - 1437801 + | alanine racemase TERM 1399 1437902 - 1437932 + F 83 -8.6 -4.09117 | opp_overlap 1437909, overlap 1437909 ATTCACGGGATCCAG TTAAAAATACTAAT AAA ATTAGTATTTTTTA TTATTTCTGGATGCC TERM 1400 1437909 - 1437925 + F 95 -6.7 -5.74288 | opp_overlap 1437909, overlap 1437902 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTCT TERM 1401 1437925 - 1437909 - f 78 -6.7 -4.67353 | opp_overlap 1437902 1437909 GGATCCAGTTAAAAA TACTAAT AAA ATTAGTA TTTTTTATTATTTCT RBE_1340 1438060 - 1438839 + | ABC transporter permease protein mkl 1438846 - 1439601 + | ribonucleotide ABC transporter ATP-binding protein RBE_1342 1439603 - 1439851 + | hypothetical protein RBE_1343 1440480 - 1439866 - | hypothetical protein RBE_1344 1440806 - 1440474 - | EMAP domain-containing protein kdsA 1441633 - 1440809 - | 2-dehydro-3-deoxyphosphooctonate aldolase secG 1441952 - 1441650 - | preprotein translocase subunit SecG RBE_1347 1442329 - 1442054 - | hypothetical protein abcT1 1443999 - 1442332 - | putative ABC transporter ATP-binding protein TERM 1402 1442657 - 1442674 + g 76 -7.1 -4.30844 | TTACGCTCCCCTCCA GAAAGTT GTCC AACTTTC TTTTGCTGATCACCT RBE_1349 1444970 - 1444020 - | ParB-like partition proteins TERM 1403 1444146 - 1444164 + gr 73 -7.6 -3.68724 | opp_overlap 1444149, overlap 1444149 TGATAAAATTTTTAC TAATGATT GTA AATCATTA TCTTCTGTTTTTTCT TERM 1404 1444569 - 1444581 + gr 82 -4.9 -5.37345 | overlap 1444578 TATTTCCATACTCTC TTTAG CAT CTAAA TTTTTTATAATTACC soj 1445646 - 1444873 - | ATPase TERM 1405 1445516 - 1445530 + gr 73 -8.6 -3.13073 | overlap 1445514 CCAGTACTACTATTA CCTTGA GGG TCAAGG TCTATTACTAAAACT gidB 1446221 - 1445643 - | glucose-inhibited division protein B gidA 1448067 - 1446202 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA ndk 1448493 - 1448071 - | nucleoside diphosphate kinase uhpC 1449811 - 1448522 - | sugar phosphate permease tlc1 1451370 - 1449874 - | ATP/ADP translocase TERM 1406 1451285 - 1451275 - G 71 -6.8 -4.14615 | opp_overlap 1451284 ACAAAACATCATAAA TGCC ATT GGCA AAAACTTTTTGTTTT prmA 1452363 - 1451446 - | ribosomal protein L11 methylase RBE_1357 1452400 - 1452777 + | hypothetical protein RBE_1358 1453716 - 1452778 - | putative translation factor protein TERM 1407 1453432 - 1453444 + g 82 -6.3 -5.07652 | TGCCGTAACTGCCGT TGCAA CAT TTGCA TTTTCTTTTAACGGA glyS 1455689 - 1453713 - | glycyl-tRNA synthetase subunit beta glyQ 1456551 - 1455682 - | glycyl-tRNA synthetase subunit alpha vapC3 1456992 - 1456651 - | toxin of toxin-antitoxin (TA) system VapC RBE_1362 1457234 - 1456989 - | putative antitoxin of toxin-antitoxin (TA) system tig 1458740 - 1457403 - | trigger factor TERM 1408 1458520 - 1458532 + g 93 -6.3 -5.53436 | opp_overlap 1458511, overlap 1458511 ATAACATGATTTACT GAATC ATT GATTC TTTTTTCTATTATAT RBE_1364 1458980 - 1460419 + | NACHT family NTPase RBE_1365 1460445 - 1462052 + | hypothetical protein TERM 1409 1462442 - 1462465 + GT 78 -9 -3.37796 | opp_overlap 1462442 1462441 GCTTAGCTCTAAAAG CTTTCACTTT TTTA AAAGTGAGAG TTATAGATGATAAAG TERM 1410 1463122 - 1463110 - gT 76 -3.4 -5.45813 | TACGAAAAAACAAAA CTTC CTACC GAAG CATCCCTTTTATCTT RBE_1366 1462021 - 1464276 + | hypothetical protein RBE_1367 1465268 - 1464327 - | transposase TERM 1411 1465218 - 1465200 - G 80 -6 -5.05782 | opp_overlap 1465200, overlap 1465202 ATGCATCTCAAAAAA CTCTTTAG AAA CTAAAGGG TTTTCAAACGCACTT TERM 1412 1465200 - 1465218 + g 79 -8.2 -4.08064 | opp_overlap 1465200 1465202 ATGCATCTCAAAAAA CTCTTTAG AAA CTAAAGGG TTTTCAAACGCACTT TERM 1413 1465317 - 1465333 + r 81 -4.5 -5.4505 | CATTATTACAATTAT TTCAATT AAA GATTGAA TTTTTTATTACAACG RBE_1368 1466673 - 1465351 - | hypothetical protein TERM 1414 1465417 - 1465428 + g 71 -2.2 -5.44119 | overlap 1465406 TATTTTAGCTAATAA GCTG ACTT TAGC TTTTTTTAAACTACG TERM 1415 1465881 - 1465893 + g 74 -7.7 -3.9009 | GCTGCTTTTTCATGC CTGCT ATA AGCAG TTTATGCAGTAAATT TERM 1416 1465986 - 1466004 + g 78 -6.6 -4.38114 | overlap 1465968 AAAAATTAGCCGAAT GGCGGGTG ATT TGCCTGCC TTTATTATCCCTTTT RBE_1369 1468799 - 1466676 - | hypothetical protein phbB 1469296 - 1468808 - | acetoacetyl-CoA reductase RBE_1371 1471639 - 1469528 - | hypothetical protein TERM 1417 1470005 - 1470030 + g 79 -9.9 -2.83163 | opp_overlap 1470010, overlap 1470000 1469998 1470004 1470010 AGTATGACCTGCTTT TAAAAGCTGTT CATC AGCAGCTTTTA CTTCTATTCCTAATC TERM 1418 1470010 - 1470025 + g 71 -5.4 -4.56314 | opp_overlap 1470010, overlap 1470000 1469998 1470005 1470004 GACCTGCTTTTAAAA GCTGTT CATC AGCAGC TTTTACTTCTATTCC TERM 1419 1471104 - 1471115 + g 70 -4.4 -4.84761 | TTCTGAAAATCTTTT GCTA CATT TAGC TTTTTATGCACCTCT TERM 1420 1471384 - 1471398 + g 79 -8.6 -3.84639 | GAGGATCTTTAGCAT TTCGTG CAT CACGAA TTATTATCGGTGTTG TERM 1421 1472523 - 1472509 - g 77 -4.2 -5.41143 | GATGCTCTAAAAAAA TACGGC AGA GACGTA ACTGAGCTTGCTGAA TERM 1422 1473987 - 1474022 + G 78 -9 -3.39407 | gap 1, opp_overlap 1473984 1474006, overlap 1473979 TGTTGGATATGATCA GGGTGGAGTCCTTACCG AAG CCGTAA-GACGCCGCCC TTATCAAGTTATATT clpB 1472017 - 1474593 + | ClpB RBE_1373 1474630 - 1474875 + | hypothetical protein RBE_1374 1474862 - 1475188 + | PemK-like growth inhibitor TERM 1423 1475321 - 1475296 - f 73 -3.5 -5.31456 | gap 1 GCAATCCAGAAAAAA TAATAAAAATGC TAT GCATTTT-ACTA GATTGCTTCGTCAAA TERM 1424 1476110 - 1476100 - f 82 -4 -5.51046 | GAAATATATAAAAAA TCTT TCC AAGA GATAAAATTATATGA TERM 1425 1476216 - 1476238 + F 80 -10 -3.24365 | opp_overlap 1476208 1476215 1476213, overlap 1476213 1476217 CATAGAATAAATTAT TTAGTCAACA TAT TGTTGACTAG TATTATAAGCTATAA TERM 1426 1476217 - 1476237 + F 85 -11.3 -2.54298 | opp_overlap 1476208 1476215 1476213, overlap 1476216 1476213 ATAGAATAAATTATT TAGTCAACA TAT TGTTGACTA GTATTATAAGCTATA RBE_1375 1476286 - 1476546 + | cytotoxic translational repressor of toxin-antitoxin (TA) system RelE RBE_1376 1476543 - 1476905 + | Phage-related transcriptional regulator RBE_1377 1477799 - 1477245 - | putative methylase TERM 1427 1477872 - 1477886 + r 74 -8.6 -3.322 | CGAACCTCTGACCTA CGGATT AGA AATCCG TTGCTCTATCCAGCT TERM 1428 1478647 - 1478619 - R 83 -7.7 -4.61527 | opp_overlap 1478625 1478628, overlap 1478620 1478625 AAAATTTGGTAAAAA TTAAAATAACTTA TTA TAAGTTATTTTAC TGGACCCCGCAGGTA TERM 1429 1478646 - 1478620 - R 93 -11.2 -3.35832 | opp_overlap 1478625 1478628, overlap 1478619 1478625 AAATTTGGTAAAAAT TAAAATAACTTA TTA TAAGTTATTTTA CTGGACCCCGCAGGT TERM 1430 1478625 - 1478641 + r 74 -6.7 -4.25104 | opp_overlap 1478625 1478620 1478619, overlap 1478628 TGGTAAAAATTAAAA TAACTTA TTA TAAGTTA TTTTACTGGACCCCG TERM 1431 1478641 - 1478625 - R 80 -6.7 -4.77757 | opp_overlap 1478625 1478628, overlap 1478620 1478619 TGGTAAAAATTAAAA TAACTTA TTA TAAGTTA TTTTACTGGACCCCG rpsP 1479056 - 1478721 - | 30S ribosomal protein S16 rpmG 1479239 - 1479069 - | 50S ribosomal protein L33 TERM 1432 1479127 - 1479144 + g 72 -8.5 -2.9916 | opp_overlap 1479133, overlap 1479126 TTTGGATCGTATTTA CGAAAAG AAAG CTTTTCG GTTTGCGTTTTTGGA hemF 1480311 - 1479472 - | coproporphyrinogen III oxidase proP7 1481566 - 1480295 - | proline/betaine transporter TERM 1433 1481661 - 1481673 + r 76 -7.7 -3.93136 | AAAATTTGCCCTTTT TGCAC GTC GTGCA TTTGTAGCTAAATCT RBE_1382 1482329 - 1481637 - | hypothetical protein RBE_1383 1482531 - 1482286 - | hypothetical protein TERM 1434 1482863 - 1482885 + r 79 -5.6 -5.08824 | AATCAAAATTATCTA GTAGGAACTT TTG GGGTTTCTAC TTTTTTAAGTGCGGC RBE_1384 1483779 - 1482856 - | hypothetical protein TERM 1435 1483244 - 1483269 + g 85 -9.1 -4.10429 | opp_overlap 1483241, overlap 1483247 TCTAAAAACTGATTA TCCTTTTCTGC AGAA GCAGAAAATGA TTTTAAAAACTCATT TERM 1436 1483247 - 1483266 + g 76 -9.4 -3.08508 | opp_overlap 1483241, overlap 1483244 AAAAACTGATTATCC TTTTCTGC AGAA GCAGAAAA TGATTTTAAAAACTC TERM 1437 1483296 - 1483312 + g 76 -3.7 -5.41143 | CATTATTTTTCTTAA TGGCAAA TAC TTTTCCA TTTTTTTCAAGGATA RBE_1385 1484667 - 1483888 - | oxidoreductase TERM 1438 1484759 - 1484701 - H 77 -10 -2.94422 | gap 3 TACTTCTAAAAAGAC TTGTATGCAGTGTTCGATGTCATTCCCGC ATAG GCGGGAATGACATCGGAG--T-CATACAA CAACGCCACCACGGA RBE_1386 1484818 - 1485009 + | hypothetical protein mutL 1485006 - 1486841 + | DNA mismatch repair protein RBE_1388 1487315 - 1487037 - | antitoxin of toxin-antitoxin (TA) system Phd TERM 1439 1487446 - 1487460 + H 72 -7.8 -3.63627 | TAGAATCTTTTTGAA GCAGCT AAA GGCTGC TTTGGGGTGTCGAAA RBE_1389 1487693 - 1488109 + | hypothetical protein TERM 1440 1488216 - 1488183 - T 82 -6.4 -5.31456 | gap 1, opp_overlap 1488183 1488186 1488193, overlap 1488186 1488193 GCAATCCAGAAAAAA TAATAAAAAATGCTA TAAAT TAGCATTTTTTA-TA CTTCCTTACTTCGTA TERM 1441 1488186 - 1488214 + T 78 -10.6 -2.87354 | opp_overlap 1488186 1488183 1488193, overlap 1488183 1488193 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTACTTCG TERM 1442 1488214 - 1488186 - T 100 -10.6 -4.73105 | opp_overlap 1488183 1488186 1488193, overlap 1488183 1488193 ATCCAGAAAAAATAA TAAAAAATGCTA TAAAT TAGCATTTTTTA TACTTCCTTACTTCG TERM 1443 1488193 - 1488207 + T 78 -4.3 -5.38249 | opp_overlap 1488193 1488186 1488183, overlap 1488186 1488183 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT TERM 1444 1488207 - 1488193 - T 88 -4.3 -5.80727 | opp_overlap 1488186 1488183 1488193, overlap 1488186 1488183 AAAAATAATAAAAAA TGCTA TAAAT TAGCA TTTTTTATACTTCCT sdhB 1489047 - 1488262 - | succinate dehydrogenase iron-sulfur subunit RBE_1391 1489699 - 1489382 - | hypothetical protein RBE_1392 1490606 - 1489680 - | site-specific DNA methylase ftsH 1492546 - 1490630 - | ATP-dependent metalloprotease FtsH TERM 1445 1491351 - 1491337 - G 71 -8.6 -2.88822 | CGTCGGACATAATCA TTGAGC GAC GCTCAA CCCCCATCATGACCT tilS 1493906 - 1492614 - | tRNA(Ile)-lysidine synthetase TERM 1446 1493674 - 1493657 - G 76 -3.5 -5.48825 | gap 1 GATGATCGAAAAAAA GGCTATAA AAC TTA-AGCC CTAAATCGTTAGCAG RBE_1395 1493971 - 1494231 + | hypothetical protein RBE_1396 1494900 - 1494358 - | hypothetical protein RBE_1397 1495464 - 1495021 - | hypothetical protein RBE_1398 1497083 - 1495476 - | hypothetical protein TERM 1447 1496740 - 1496726 - G 77 -10 -2.71011 | opp_overlap 1496725 AGCCGCCGGCAAGCA TCGCAG TAG CTGCGA CTATAGTGTCGTTCC RBE_1399 1497562 - 1497155 - | hypothetical protein RBE_1400 1499992 - 1497581 - | putative hemagglutinin protein TERM 1448 1499070 - 1499056 - G 77 -10 -2.71011 | opp_overlap 1499055 AGCCGCCGGCAAGCA TCGCAG TAG CTGCGA CTATAGTGTCGTTCC RBE_1401 1500462 - 1500109 - | putative Zn-dependent hydrolase RBE_1402 1501048 - 1500611 - | putative Zn-dependent hydrolase RBE_1403 1501540 - 1501058 - | hypothetical protein TERM 1449 1501101 - 1501117 + g 77 -3.8 -5.49729 | GATCGTTTAGCTTGC TCTTTT TCTAC AAAAGA TTTTTTTGGCTCATT lysC 1503001 - 1501781 - | aspartate kinase rpmA 1503558 - 1503298 - | 50S ribosomal protein L27 TERM 1450 1503415 - 1503425 + g 74 -5.4 -4.84017 | AATCCCAACATTTAC TCCA GGA TGGA TTTTTGTACCACGTT rplU 1503915 - 1503598 - | 50S ribosomal protein L21 RBE_1407 1504456 - 1504115 - | putative pterin-4-alpha-carbinolamine dehydratase TERM 1451 1504330 - 1504296 - G 79 -7.3 -4.38154 | opp_overlap 1504295 1504304 ATAGGTTGCATAAAA TCAGGAAATTTATAC TTTTT GTATAGATGTCCTGA CTCATTCACTATCCA phhA 1505218 - 1504478 - | phenylalanine 4-monooxygenase TERM 1452 1505319 - 1505287 - R 100 -16.4 -3.44553 | opp_overlap 1505283, overlap 1505280 1505279 1505288 TTAAAAACGTCATAA TTGTCATCCCGTGG CTTGT CCACGGGATGACAC CGAATGCTTAAGACA TERM 1453 1505318 - 1505288 - R 100 -19.9 -2.66009 | opp_overlap 1505283, overlap 1505287 1505280 1505279 TAAAAACGTCATAAT TGTCATCCCGTGG CTTGT CCACGGGATGACA CCGAATGCTTAAGAC pgpA 1506248 - 1505649 - | phosphatidylglycerophosphatase A tatA 1506316 - 1506471 + | twin argininte translocase protein A RBE_1411 1506833 - 1507339 + | ankyrin repeat-containing protein TERM 1454 1507429 - 1507452 + TF 70 -9 -2.62928 | opp_overlap 1507428 1507429 1507432, overlap 1507424 1507432 TAAAGCGAGATAAAT CGAGCTTTTA ACTT TAAAAGCTTG CTGTATTTATACTTT RBE_1412 1508673 - 1507555 - | ABC-type transport systems periplasmic component TERM 1455 1508086 - 1508098 + gF 70 -4.1 -4.87665 | ATAAAATTCAGTAAG TGCTA AGG TGGCA TTTTTCTGAATCAAA RBE_1413 1508639 - 1509541 + | putative methyltransferase RBE_1414 1509611 - 1509994 + | hypothetical protein RBE_1415 1510176 - 1510478 + | hypothetical protein TERM 1456 1510476 - 1510526 + T 89 -9.2 -4.20516 | opp_overlap 1510483 1510487, overlap 1510487 GAGTTGAAATTAGAA TAGGAAATAAATAGGTCGTTATGT TAA ACGTAACGACCTATTTAGTAACGA TTTATTAACTACAGC TERM 1457 1510519 - 1510483 - T 100 -16.9 -3.98762 | opp_overlap 1510476 1510487, overlap 1510487 AATTAGAATAGGAAA TAAATAGGTCGTTATGT TAA ACGTAACGACCTATTTA GTAACGATTTATTAA TERM 1458 1510515 - 1510487 - T 100 -13.3 -4.57787 | opp_overlap 1510476 1510487, overlap 1510483 AGAATAGGAAATAAA TAGGTCGTTATGT TAA ACGTAACGACCTA TTTAGTAACGATTTA TERM 1459 1510487 - 1510515 + T 100 -15.5 -3.75461 | opp_overlap 1510487 1510483, overlap 1510476 AGAATAGGAAATAAA TAGGTCGTTATGT TAA ACGTAACGACCTA TTTAGTAACGATTTA RBE_1416 1510692 - 1510531 - | hypothetical protein RBE_1417 1511020 - 1510775 - | Na+/H+ antiporter NhaA RBE_1418 1511387 - 1510989 - | Na+/H+ antiporter NhaA TERM 1460 1511111 - 1511086 - GH 71 -7.7 -3.53452 | opp_overlap 1511087, overlap 1511101 AAACTAGAGCAAACA CTTCTAAAGGA GAAA TCTTTTAGAAG AACTCCAGAATTCAT TERM 1461 1511248 - 1511234 - GH 70 -4.2 -4.8543 | overlap 1511236 TAACTGGTATAAAAA GTGCTA TTA TAGCTC CGCATAAAGTTCCGT RBE_1419 1511625 - 1513178 + | Type I restriction-modification system methyltransferase subunit TERM 1462 1513219 - 1513203 - f 93 -4.5 -6.25741 | AAACAACAAAAAAAA GAAAAAA TAA TTCTTTC AATTTCAAAAAAGTC dapE 1513443 - 1514618 + | succinyl-diaminopimelate desuccinylase holC 1514912 - 1515373 + | DNA polymerase III subunit chi znuC 1516230 - 1515529 - | Zinc ABC transporter ATP-binding protein RBE_1423 1516851 - 1516387 - | phosphatidylethanolamine-binding protein PEBP TERM 1463 1516923 - 1516946 + r 70 -9 -2.62928 | opp_overlap 1516922 1516923 1516926, overlap 1516918 1516926 TAAAGCGAGATAAAT CGAGCTTTTA ACTT TAAAAGCTTG CTGTATTTATACTTT omp 1517479 - 1517000 - | 17 kD surface antigen precursor RBE_1425 1517740 - 1518645 + | cation diffusion facilitator family transporter RBE_1426 1518642 - 1519100 + | cytosine deaminase RBE_1427 1519586 - 1519149 - | hypothetical protein hemH 1520676 - 1519612 - | ferrochelatase TERM 1464 1520638 - 1520657 + g 93 -5 -6.04953 | TGGACCTCCTAAATT GAAAAGCA CTAT TGCTATTC TTTTTTTATTTATAT hemE 1521685 - 1520663 - | uroporphyrinogen decarboxylase TERM 1465 1521185 - 1521202 + g 77 -4.3 -5.17353 | TTCTTTTGCTAAGTC TTTATTT TCAT AAATAAA TTTTTTGCTAACTCT