TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.679982 %AT, 838363 nt, 4724 terms. Intergenic: 0.714046 %AT, H2T: 214481 nt, 1564 terms; T2T: 69590 nt, 1153 terms; H2H: 54638 nt, 921 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157803189|ref|NC_009879.1| Rickettsia canadensis str. McKiel, complete genome (length 1159772) A1E_00005 1 - 822 + | hypothetical protein A1E_00010 1065 - 1382 + | thioredoxin A1E_00015 1375 - 2136 + | O-antigen export system ATP-binding protein RfbE TERM 1 2324 - 2303 - g 80 -7.5 -4.17701 | CTCATAAATGATAAA GTATTTTTT TTCT AAAAAATAC TGGCAGGCAATAGCA TERM 2 2658 - 2671 + G 72 -2.4 -5.33124 | ATTTGTTCATTTTCG GCAA TGTATT TTGC TTTTATTTTATTATT A1E_00020 2295 - 3071 + | hypothetical protein TERM 3 3891 - 3856 - g 74 -6.8 -4.2528 | gap 1 TTCTAAGGGAATAAA TGTCATCCGGTGGCCGC CCC GCCGCCACGGGATC-CA AAAAAAAATTAAAAA A1E_00025 3068 - 6214 + | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase A1E_00030 7127 - 6333 - | UDP-N-acetylglucosamine acyltransferase fabZ 7569 - 7135 - | (3R)-hydroxymyristoyl-ACP dehydratase A1E_00040 8598 - 7570 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 4 8742 - 8703 - H 95 -12.3 -3.79113 | opp_overlap 8708, overlap 8708 ACGTGGCCATAATAA TTGAATGTCATTCCCGC GGGGAA GCGGGAATGACATTTTA CTCAGAAAGAAACAT TERM 5 8737 - 8708 - H 100 -16.6 -3.31443 | opp_overlap 8708, overlap 8703 GCCATAATAATTGAA TGTCATTCCCGC GGGGAA GCGGGAATGACA TTTTACTCAGAAAGA TERM 6 8708 - 8737 + H 100 -16.6 -4.25104 | opp_overlap 8708 8703 GCCATAATAATTGAA TGTCATTCCCGC GGGGAA GCGGGAATGACA TTTTACTCAGAAAGA TERM 7 9526 - 9516 - g 83 -6.8 -4.8543 | GAAGCCCTACAAAAA TCCG GTG CGGA CGGTATTATGATCGG A1E_00045 8865 - 9845 + | nifR3-like protein A1E_00050 10900 - 10469 - | hypothetical protein A1E_00055 11694 - 10891 - | zinc/manganese ABC transporter substrate binding protein A1E_00060 13009 - 11798 - | poly(A) polymerase A1E_00065 14010 - 13738 - | ComEC/Rec2-related protein A1E_00070 14292 - 14453 + | hypothetical protein TERM 8 14961 - 14947 - g 70 -6.4 -4.20977 | AATAAGAGAAAAAGA CCTCCT ACT AGAAGG AAAATATTAGTAGGC TERM 9 15476 - 15460 - g 87 -4.3 -5.78622 | overlap 15461 TCAGCTCAAAAAAAA GCTCCCG TTG CGGAAGT ATCGACAGCTGGACC TERM 10 15475 - 15461 - g 77 -7.8 -4.06089 | overlap 15460 CAGCTCAAAAAAAAG CTCCCG TTG CGGAAG TATCGACAGCTGGAC TERM 11 17083 - 17096 + G 71 -6.7 -3.99494 | GACTCAGAGCTATCA CGTGA GCTA TCACG TTCTTATTCAGTTGG TERM 12 19014 - 18980 - g 80 -7.5 -4.3014 | overlap 19002 ATAGAGTTATTAAAA TATTAGATAATAC ATTCAAGCA GTATTATCTAATA CCAAAACAACCAAAA A1E_00075 14710 - 19161 + | cell surface antigen Sca1 TERM 13 19208 - 19239 + F 71 -8.8 -2.88776 | opp_overlap 19202, overlap 19207 TATAAAACTTCTAAC TGTCATCCCGTG ATTGTAGC CACGGTATGACA CTTTAATACATTTAC TERM 14 19362 - 19415 + F 100 -21.7 -3.57039 | opp_overlap 19368, overlap 19368 19411 CATTCTCTATTTTCC TATAAATTAAGATTATTGAGGTAAT AATT ATTACCTCAATAATCTTAATTTAGA TTCTAATTATAACTA TERM 15 19368 - 19409 + F 100 -20.7 -3.83154 | opp_overlap 19368, overlap 19362 CTATTTTCCTATAAA TTAAGATTATTGAGGTAAT AATT ATTACCTCAATAATCTTAA TTTAGATTCTAATTA TERM 16 19409 - 19368 - f 100 -20.7 -3.86346 | opp_overlap 19368 19362 CTATTTTCCTATAAA TTAAGATTATTGAGGTAAT AATT ATTACCTCAATAATCTTAA TTTAGATTCTAATTA lpxD 19742 - 20143 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 17 20310 - 20300 - T 80 -4 -5.58074 | TAACCATCAAAAAAA GATA TAA TATC TGCTAAAGATCAATT TERM 18 20828 - 20775 - T 100 -17.2 -3.76835 | opp_overlap 20779 20780, overlap 20778 20780 GGGAAGAAGACATAA TAAGATGGTAATACTTTCATGTAC TAATTG GTACATGAAAGTATTACCAATTTA ATTCAAATACATTAT TERM 19 20825 - 20778 - T 100 -14.5 -3.99553 | opp_overlap 20779 20780, overlap 20775 20780 AAGAAGACATAATAA GATGGTAATACTTTCATGTAC TAATTG GTACATGAAAGTATTACCAAT TTAATTCAAATACAT TERM 20 20779 - 20824 + T 100 -18.7 -3.91911 | opp_overlap 20778 20775 20780, overlap 20780 AGAAGACATAATAAG ATGGTAATACTTTCATGTACT AATT GGTACATGAAAGTATTACCAA TTTAATTCAAATACA TERM 21 20780 - 20823 + T 100 -22.2 -2.94825 | opp_overlap 20778 20775 20780, overlap 20779 GAAGACATAATAAGA TGGTAATACTTTCATGTACT AATT GGTACATGAAAGTATTACCA ATTTAATTCAAATAC TERM 22 20823 - 20780 - T 100 -21.5 -3.56668 | opp_overlap 20780 20779, overlap 20778 20775 GAAGACATAATAAGA TGGTAATACTTTCATGTAC TAATTG GTACATGAAAGTATTACCA ATTTAATTCAAATAC TERM 23 21332 - 21311 - T 78 -8.9 -3.25567 | opp_overlap 21313, overlap 21309 21308 ATATTTTAAAAATTA TATCATGAT AAAT ATCATGATA TTGCAAGGTCTATAA A1E_00085 22403 - 21912 - | F0F1 ATP synthase subunit B A1E_00090 22870 - 22403 - | F0F1 ATP synthase subunit B' A1E_00095 23112 - 22888 - | F0F1 ATP synthase subunit C A1E_00100 24015 - 23287 - | F0F1 ATP synthase subunit A A1E_00105 24283 - 24020 - | hypothetical protein A1E_00110 25277 - 24453 - | protein-disulfide isomerase A1E_00115 25444 - 25971 + | hypothetical protein A1E_00120 27784 - 26180 - | F0F1 ATP synthase subunit A TERM 24 26629 - 26641 + g 70 -6.3 -4.29049 | opp_overlap 26629, overlap 26626 ATCGATATTTACCAA GCTTT TTA AAAGC TTCTTTTGCTACTTG A1E_00125 29021 - 27939 - | recombination protein F TERM 25 28512 - 28522 + g 70 -4 -5.06016 | ATCATCTTGTATTTC TTCT GCT AGAA TTTTATTTCTCTCAT TERM 26 28920 - 28944 + g 87 -10.1 -3.8398 | overlap 28922 TTTACCGCTACCGTT TTCCCCTATAA GAA TTATAGGGGTA TTATCTATTTTCAGT TERM 27 28922 - 28942 + g 100 -12.7 -3.49289 | overlap 28920 TACCGCTACCGTTTT CCCCTATAA GAA TTATAGGGG TATTATCTATTTTCA recF 29714 - 29046 - | recombination protein F A1E_00135 29927 - 29838 - | hypothetical protein TERM 28 31023 - 31010 - R 71 -2.5 -5.41143 | GAGGTGTTAAAAAAA TATTT AGAA AAATA GATGTTAATTTTATA A1E_00140 31916 - 31347 - | hypothetical protein A1E_00145 31988 - 32626 + | hypothetical protein TERM 29 32725 - 32680 - f 100 -18.5 -4.57569 | opp_overlap 32680 CCATGGCTCGAAAAA CGCATTCGATGCCATTAACAC TTTT GCACGAATGGCATCGAATGCG TTTTCCAATCCACTA TERM 30 32680 - 32725 + F 100 -12.1 -4.14243 | opp_overlap 32680 CCATGGCTCGAAAAA CGCATTCGATGCCATTA ACACTTTTGCAC GAATGGCATCGAATGCG TTTTCCAATCCACTA A1E_00150 33032 - 33145 + | hypothetical protein A1E_00155 34747 - 33425 - | hypothetical protein TERM 31 34461 - 34471 + g 74 -4 -5.20781 | TGTTTTTTTAAATTT TCAA AAA TTGA TTTTATTTTCTGATC A1E_00160 34900 - 34766 - | hypothetical protein TERM 32 35171 - 35145 - H 71 -7.5 -3.66844 | gap 1, opp_overlap 35151, overlap 35151 TTTATATGCTAAGAA TAAGAAGAAGCA GCCT TGCT-CTTCTTA AGTAAGTTTATCTGC TERM 33 36194 - 36204 + H 71 -4 -5.11937 | overlap 36192 36191 TTTCTGTTTTTATTT TCTT TGA AAGA TTTTTTGAGATTATT TERM 34 36965 - 36952 - g 83 -6.7 -4.86033 | overlap 36940 36957 AAAGCTTTAGAAAAA GCAAG CAGC CTTGC TAAAGATAGTGGTGA TERM 35 37133 - 37117 - g 71 -2.9 -5.22039 | CGCAAAGGTAAAAAA GCTGATA CCG CATCGGC AGAGAATAGCTATGA A1E_00165 36670 - 39246 + | clpB protein TERM 36 39378 - 39349 - T 100 -13.9 -4.45083 | opp_overlap 39349 TTTATATTTATAAAA TTTAGGATAAGAT TTAA ATCTTATCCTAAA TTTAGGGTTAATAAC TERM 37 39349 - 39378 + T 100 -13.9 -3.67976 | opp_overlap 39349 TTTATATTTATAAAA TTTAGGATAAGAT TTAA ATCTTATCCTAAA TTTAGGGTTAATAAC A1E_00170 39874 - 39386 - | hypothetical protein A1E_00175 41095 - 40067 - | O-sialoglycoprotein endopeptidase TERM 38 41107 - 41137 + r 85 -10 -3.34233 | opp_overlap 41105 41111, overlap 41096 41111 41116 TCATTCAAATTAACA TTAATTAGATACCT TGA AGGTATTTAATTGA TTATACAGCTTATAA TERM 39 41111 - 41133 + r 75 -8.6 -3.4489 | opp_overlap 41105 41111, overlap 41096 41107 41116 TCAAATTAACATTAA TTAGATACCT TGA AGGTATTTAA TTGATTATACAGCTT A1E_00180 42300 - 41107 - | O-sialoglycoprotein endopeptidase rpsF 43248 - 43613 + | 30S ribosomal protein S6 rpsR 43638 - 43925 + | 30S ribosomal protein S18 TERM 40 44160 - 44143 - g 82 -8.5 -4.0014 | AGTAGAAAAAATCAA TGCTCTT ATTA AAGAGCA AAAATTAGTGTTTAT A1E_00195 43937 - 44452 + | 50S ribosomal protein L9 TERM 41 44568 - 44554 - f 78 -4.3 -5.43514 | opp_overlap 44548 44554 AAAATAATTAAAAAA TGCTA TAAAT TAGCA TTTTTATTCTTCCGT TERM 42 44554 - 44568 + F 76 -4.3 -5.30348 | opp_overlap 44554, overlap 44548 AAAATAATTAAAAAA TGCTA TAAAT TAGCA TTTTTATTCTTCCGT A1E_00200 44961 - 46259 + | tRNA(Ile)-lysidine synthetase TilS rplI 46356 - 48266 + | 50S ribosomal protein L9 TERM 43 48845 - 48865 + G 73 -8.3 -3.38118 | opp_overlap 48840, overlap 48846 TGATAAATATTTAGG CCCTGCAAT TTT ATTGCAGGC TTATCGATGGATTGT TERM 44 48846 - 48864 + G 87 -11.8 -2.62389 | opp_overlap 48840, overlap 48845 GATAAATATTTAGGC CCTGCAAT TTT ATTGCAGG CTTATCGATGGATTG A1E_00210 48267 - 49052 + | succinate dehydrogenase iron-sulfur subunit sdhB 51126 - 50050 - | succinate dehydrogenase iron-sulfur subunit TERM 45 50412 - 50430 + g 81 -3.8 -5.52909 | opp_overlap 50416, overlap 50413 AGCCGTAATCGATTA TTAAGCAG CTG CCGCTTAG TTTTTTTAGATGTTG A1E_00220 51884 - 51105 - | prolipoprotein diacylglyceryl transferase A1E_00225 52158 - 53309 + | putative carbamate kinase TERM 46 53361 - 53394 + F 72 -6.1 -4.32491 | opp_overlap 53357 53358, overlap 53360 53358 53363 ATACATTAATATTTG CATCCAAAATGGAAG CTAC CTTTCATCTTGGATA TTATTATTTTTAACT TERM 47 53363 - 53392 + F 78 -8.7 -3.74454 | opp_overlap 53357 53358, overlap 53360 53361 53358 ACATTAATATTTGCA TCCAAAATGGAAG CTAC CTTTCATCTTGGA TATTATTATTTTTAA TERM 48 54441 - 54424 - g 70 -7.1 -3.57783 | CTATTACAAGTAGAA TTTTTGC CGGA GCAAAAA AAGTAGACTTACTAG A1E_00230 53499 - 55181 + | putative inner membrane protein translocase component YidC A1E_00235 55181 - 55726 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 49 55736 - 55762 + F 95 -11.8 -3.34344 | opp_overlap 55730 55731 55738, overlap 55743 TTTTAAAAACGCTAA TAGCAAATTACT ATA GGTAATTTGCTA TTGATTGCAAGGTGG TERM 50 55760 - 55738 - f 79 -9.3 -3.17553 | opp_overlap 55736 55743, overlap 55730 55731 TTAAAAACGCTAATA GCAAATTAC TATAG GTAATTTGC TATTGATTGCAAGGT TERM 51 56014 - 55995 - f 73 -8 -3.45737 | CAATTAGGATTAGAA GATACTTT TTAT AAAGTATC ACTGCCAGATGCGTC A1E_00240 56122 - 56274 + | hypothetical protein TERM 52 56317 - 56334 + T 89 -9.9 -3.84644 | CTTAGGAAGATGTCA TTCCTGC GAAA GCAGGAA TTTAGACTTTTTTGT TERM 53 56462 - 56445 - T 80 -9.9 -2.82681 | TAAAAGGTTACTAGA TTCCTGC TTTC GCAGGAA TGACATAGAGCAGAT A1E_00245 56925 - 56527 - | hypothetical protein TERM 54 56991 - 57008 + H 71 -2.7 -5.38951 | opp_overlap 56991 TATTAAATATAAAAG GTGAAAA ACGG TTTCCAC TTTTTTATATAAATT TERM 55 57655 - 57676 + H 71 -4.4 -4.92757 | overlap 57657 TAATATGCTTATTTA TGGTGCAG CAAGCT CTGCACAA TTTTCTTCTTGATCA TERM 56 58101 - 58085 - g 72 -5.9 -4.47397 | AGAAAGATATGAAAA TAAGAAG TTT CTTCCTA TGGCGTTTATGATGT A1E_00250 58011 - 59516 + | ADP,ATP carrier protein TERM 57 59536 - 59556 + F 77 -4.7 -5.31275 | opp_overlap 59536 TAATTTTATAAAAAA GCAAGTTTC TTA GAAGATTGC TTTTTTATAGTCCGA A1E_00255 59583 - 60872 + | putative inner membrane protein translocase component YidC ndk 60902 - 61324 + | nucleoside diphosphate kinase TERM 58 62961 - 62939 - g 81 -10 -3.15999 | TTGTTATATATTGAA GCTAAATACG CGT CATATTTAGC TAAACAGCAAGCAGA A1E_00265 61328 - 63202 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 59 63435 - 63446 + F 73 -3 -5.40072 | TAATAGAAGCTGATT TACA TAAA TGTA TTTTTTTAGAAAAAG A1E_00270 63722 - 64489 + | soj protein TERM 60 64784 - 64772 - g 82 -4.9 -5.37345 | overlap 64765 GGTAATTATAAAAAA TTTAG ATG CTAAA GAGAGTGTAGAAATA A1E_00275 64476 - 65336 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 61 65349 - 65339 - f 70 -5.4 -4.62957 | ACAATTAAATTAAAA TCCA ATA TGGA AAAATCATCAATAAG TERM 62 66969 - 66952 - g 80 -7.1 -4.72497 | CAGTGATCAACAAAA GAAAGTT GGAC AACTTTC AGGTGGAGAACGTAA A1E_00280 65627 - 67294 + | putative ABC transporter ATP-binding protein A1E_00285 67297 - 67614 + | putative ABC transporter ATP-binding component A1E_00290 67649 - 68473 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 63 68790 - 68732 - f 86 -6.09999 -5.33985 | gap 3, opp_overlap 68746 68780, overlap 68746 TTTAAAAAAAATAAA TTTCTGTCAAAAAATCATTTATATTTTA TTTATT TAAAATATAAATGATTTTTTGACAG--- AAAATTTTAATAATC TERM 64 68779 - 68746 - f 100 -10 -5.00884 | opp_overlap 68746, overlap 68732 ATTTCTGTCAAAAAA TCATTTATATTTTA TTTATT TAAAATATAAATGA TTTTTTGACAGAAAA TERM 65 68746 - 68779 + F 100 -10 -5.00616 | opp_overlap 68746 68732 ATTTCTGTCAAAAAA TCATTTATATTTTA TTTATT TAAAATATAAATGA TTTTTTGACAGAAAA A1E_00295 69000 - 69086 + | hypothetical protein A1E_00300 70197 - 69865 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 66 70271 - 70315 + H 70 -2.2 -5.53991 | gap 1, opp_overlap 70284, overlap 70273 GTGGCATTGTTGCAT GATTCTGATGT-AATTCCCAC GAAG GCGGGAATTAACATTGGACAC TTTTTTTGATCCATG A1E_00305 70360 - 71490 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein A1E_00310 71666 - 73396 + | arginyl-tRNA synthetase argS 73472 - 74143 + | arginyl-tRNA synthetase A1E_00320 74328 - 76544 + | DNA topoisomerase IV subunit A TERM 67 76745 - 76729 - T 84 -9.5 -3.65224 | AGGCTATTGCAATAA CGAACTA TAA TAGTTCG ATTAAAAAAGTTAAA TERM 68 76795 - 76761 - T 100 -12.5 -4.06778 | gap 1, opp_overlap 76764 76768, overlap 76755 76764 ATTAAAAAAGTTAAA TAATCAAGGCATAAGA TTGC TCT-ATGCCTTGATTA TAATAATGATGAAAT TERM 69 76792 - 76764 - T 91 -9.8 -4.12072 | gap 1, opp_overlap 76764 76768, overlap 76761 76755 AAAAAAGTTAAATAA TCAAGGCATAAGA TTGC TCT-ATGCCTTGA TTATAATAATGATGA TERM 70 76764 - 76792 + T 85 -9.8 -3.45023 | gap 1, opp_overlap 76764 76761 76755, overlap 76768 AAAAAAGTTAAATAA TCAAGGCATAAGA TTGC TCT-ATGCCTTGA TTATAATAATGATGA A1E_00325 78230 - 76908 - | DNA topoisomerase IV subunit A TERM 71 78796 - 78774 - g 74 -9.2 -3.07113 | opp_overlap 78769 78768, overlap 78776 TATTATCCCACCTAA TAGTTTTGCC CTT GGCAGAACTA TAGAATATTTTAAAG dcd 78514 - 79080 + | deoxycytidine triphosphate deaminase TERM 72 79494 - 79510 + G 76 -9.5 -3.13382 | overlap 79503 GATTTTATTATCCGT TCATTGC CCG GCAATGA TATTCCCATTTGCTA A1E_00335 79177 - 79635 + | preprotein translocase subunit SecB TERM 73 79827 - 79786 - f 70 -2 -5.39721 | gap 1, overlap 79793 GCACTAGATAAAAAA TTATAAATTAATTAACAAT AACTA ACTGT-AATTAAATTATAA CACAATATAAAAATT A1E_00340 79861 - 80574 + | preprotein translocase subunit SecB A1E_00345 80578 - 81399 + | 7-cyano-7-deazaguanine reductase A1E_00350 82232 - 81672 - | hypothetical protein TERM 74 82360 - 82346 - R 86 -4.3 -5.87996 | opp_overlap 82346 CAAGTAATAAAAAAA TGCTA TAAAT TAGCA TTTTTAACTGTATTG TERM 75 82892 - 82908 + r 75 -9.3 -2.5805 | overlap 82892 AGTAAAACATTCATA TGCCCCC CCT GGGGGCC ATTCTACCGGCTACT A1E_00360 82976 - 82887 - | hypothetical protein A1E_00370 83232 - 83489 + | hypothetical protein TERM 76 83898 - 83887 - T 73 -4.4 -5.06411 | ATAAAATAAAACAAA TAGC AGAA GCTA AATATAGTAATTGGA A1E_00380 84722 - 83991 - | hypothetical protein A1E_00385 84866 - 85750 + | S-adenosylmethionine transporter TERM 77 85866 - 85879 + G 75 -2.4 -5.54079 | GATGAAGCTAATACT GCTT TACTAC AAGC TTTTTTAGTTTTTGC queF 85737 - 86999 + | 7-cyano-7-deazaguanine reductase A1E_00395 87321 - 87623 + | preprotein translocase subunit SecG A1E_00400 87913 - 88575 + | hypothetical protein TERM 78 88554 - 88576 + T 83 -8.6 -4.33754 | opp_overlap 88570, overlap 88566 88570 AGTTTGCTTAATAAG CTTATTCTTT AAG AAAGGATAAG TTTTAACTTATCCTT TERM 79 88566 - 88593 + T 100 -14.4 -3.28416 | opp_overlap 88570, overlap 88554 88570 AAGCTTATTCTTTAA GAAAGGATAAGT TTTA ACTTATCCTTTC TTAATATGAATAGTG TERM 80 88589 - 88570 - T 88 -9.4 -4.16016 | opp_overlap 88554 88566 88570 TTATTCTTTAAGAAA GGATAAGT TTTA ACTTATCC TTTCTTAATATGAAT TERM 81 88570 - 88589 + T 88 -9.4 -4.29508 | opp_overlap 88570, overlap 88554 88566 TTATTCTTTAAGAAA GGATAAGT TTTA ACTTATCC TTTCTTAATATGAAT TERM 82 88775 - 88815 + T 87 -9.4 -3.98484 | gap 1, opp_overlap 88779 88780 88790, overlap 88780 88783 88790 88811 GATTTCTACAACTTT TAAATCAATAGCAAATTAC ATAA GTAATTTGCTATTG-TTGA TTTATAAATTAACTT TERM 83 88812 - 88779 - T 100 -12.7 -3.62591 | opp_overlap 88775 88780 88783 88790 88811, overlap 88780 88790 TCTACAACTTTTAAA TCAATAGCAAATTAC ATAA GTAATTTGCTATTGT TGATTTATAAATTAA TERM 84 88811 - 88780 - T 100 -16.2 -2.77233 | opp_overlap 88775 88780 88783 88790, overlap 88779 88790 CTACAACTTTTAAAT CAATAGCAAATTAC ATAA GTAATTTGCTATTG TTGATTTATAAATTA TERM 85 88780 - 88811 + T 100 -16.2 -3.63059 | opp_overlap 88780 88779 88790, overlap 88775 88783 88790 CTACAACTTTTAAAT CAATAGCAAATTAC ATAA GTAATTTGCTATTG TTGATTTATAAATTA TERM 86 88783 - 88808 + T 100 -12.1 -3.93401 | opp_overlap 88780 88779 88790, overlap 88780 88775 88790 CAACTTTTAAATCAA TAGCAAATTAC ATAA GTAATTTGCTA TTGTTGATTTATAAA secG 94246 - 88817 - | preprotein translocase subunit SecG TERM 87 92071 - 92085 + g 76 -8.6 -3.45571 | TATTGATTCCTTGCT CAGCAT ATG ATGCTG TTAATATTTGGCGGA TERM 88 92378 - 92414 + g 82 -9.6 -3.66251 | gap 1, overlap 92376 AGGCAGTGGTGGTGG TGGTGGTGGTAGCA-GC GGCG GCATGTTACCATTACCA TGTGTTTTATTTTGA TERM 89 94850 - 94826 - g 77 -2.9 -5.63374 | opp_overlap 94826 94837 TTAATAGCAAAAAAA CATGCATAT ATTGCTG ATAAGCATG TATATTTTAATGTTT TERM 90 95447 - 95433 - g 72 -3.6 -5.31456 | TTAATTTACAAAAAA TAGATA TCA TACCTA ATGATTTTATGCAAA cysS 94415 - 95794 + | cysteinyl-tRNA synthetase TERM 91 95958 - 95934 - f 73 -5.2 -4.77173 | opp_overlap 95934 TTTTGATAAAATAAA CATACAAAAA CAAGT TTTTTATATG TTTTTCTGAATTTTC rpsB 96094 - 96981 + | 30S ribosomal protein S2 tsf 97003 - 97932 + | elongation factor Ts A1E_00425 100189 - 98936 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 92 99682 - 99696 + g 80 -5.8 -5.01732 | TTTTGAGGATAAGCT GAAAAA AGC TTTTTC TTTTTTGCCAAGCTT A1E_00430 100842 - 100186 - | 3-deoxy-D-manno-octulosonic-acid transferase A1E_00435 102137 - 100917 - | aspartate aminotransferase TERM 93 103224 - 103236 + GH 70 -5.5 -4.47786 | opp_overlap 103224, overlap 103215 TCTCTGAGTAAACAA GGGTA TTT TGCCC TTTGTTTACCTACTT A1E_00440 102411 - 103418 + | hypothetical protein A1E_00445 103393 - 104178 + | vacJ lipoprotein precursor A1E_00450 104204 - 104794 + | aspartate aminotransferase TERM 94 105467 - 105453 - f 80 -5.8 -5.05782 | overlap 105464 ATCGAGTGCAAAAAA TTAGTA ATT TACTAA ATATAGATTCAGCTT TERM 95 106392 - 106382 - g 71 -5.4 -4.5442 | opp_overlap 106382 TTCCCAAGTATAAAA GCAA GTC TTGC TAATTCTGGCGGCAT A1E_00455 105806 - 106873 + | alanine racemase TERM 96 107279 - 107295 + G 95 -5.9 -5.78622 | TTTTACTCTTTGCCG GTTGTTA CTA TGACAAC TTTTTTTTCAGGTGC A1E_00460 107108 - 107887 + | ABC transporter permease protein TERM 97 108532 - 108515 - g 77 -4.2 -5.44119 | opp_overlap 108515 108517 TTCATGCCAAAAAAA TAGCTA AAGAAG TAGCTA TGATTTATCAAGGAA A1E_00465 107890 - 108651 + | ribonucleotide ABC transporter ATP-binding protein TERM 98 108797 - 108817 + G 93 -8.5 -4.80167 | opp_overlap 108796 108794 108797 108800 ATATAATAAAAATAG TAATTATTC TTG GAATAATTA TTTTAATTTTTAGTC TERM 99 108817 - 108797 - g 72 -8.5 -3.13245 | opp_overlap 108797, overlap 108796 108794 108800 ATATAATAAAAATAG TAATTATTC TTG GAATAATTA TTTTAATTTTTAGTC alr 108694 - 108942 + | alanine racemase rpmB 109015 - 109308 + | 50S ribosomal protein L28 A1E_00480 109305 - 109541 + | 50S ribosomal protein L31 TERM 100 109646 - 109678 + F 100 -10.9 -5.65513 | opp_overlap 109646 109655, overlap 109647 TGACAAAGTAATCCA GTTAAAAAATGCTAA AGA TTAGCATTTTTTAAG TTTTTTTGGTTGCTA TERM 101 109678 - 109646 - f 84 -10.9 -2.64878 | opp_overlap 109646 109647, overlap 109655 TGACAAAGTAATCCA GTTAAAAAATGCTAA AGA TTAGCATTTTTTAAG TTTTTTTGGTTGCTA TERM 102 109647 - 109677 + F 100 -14.4 -3.97681 | opp_overlap 109646 109655, overlap 109646 GACAAAGTAATCCAG TTAAAAAATGCTAA AGA TTAGCATTTTTTAA GTTTTTTTGGTTGCT TERM 103 109669 - 109655 - f 86 -7.2 -5.10497 | opp_overlap 109647 109646, overlap 109646 AATCCAGTTAAAAAA TGCTAA AGA TTAGCA TTTTTTAAGTTTTTT TERM 104 110133 - 110097 - f 86 -9.8 -3.61715 | opp_overlap 110107, overlap 110100 110107 CACGGGTTCCAAGAA CAACTTAAAATACTAA TAATT TTAGTATTTTAAACTG GATACCGCGATCAAG TERM 105 110130 - 110100 - f 75 -7.9 -3.9461 | opp_overlap 110107, overlap 110097 110107 GGGTTCCAAGAACAA CTTAAAATACTAA TAATT TTAGTATTTTAAA CTGGATACCGCGATC TERM 106 110200 - 110222 + F 75 -5.8 -4.72631 | opp_overlap 110200 110202, overlap 110202 ATTTTTGATAAAAAA TATATAAAAA AGT TTTTTATATG TTTTGTTGGATTCCT TERM 107 110222 - 110200 - f 72 -3.6 -5.24531 | opp_overlap 110200 110202, overlap 110202 ATTTTTGATAAAAAA TATATAAAAA AGT TTTTTATATG TTTTGTTGGATTCCT TERM 108 110220 - 110202 - f 70 -6.2 -4.25873 | opp_overlap 110200 110202, overlap 110200 TTTTGATAAAAAATA TATAAAAA AGT TTTTTATA TGTTTTGTTGGATTC TERM 109 110243 - 110265 + F 83 -8.6 -4.41548 | TTGGATTCCTGCTTT TAGCTAGAAT GAT ATTTTAGCTA TTTTCTAAGCTATGC A1E_00485 110321 - 110980 + | GTPase EngB A1E_00490 111131 - 111256 + | acetylglutamate kinase A1E_00495 111737 - 112024 + | Type IV secretory pathway, VirB3-like protein TERM 110 112662 - 112648 - g 70 -4.2 -5.03145 | opp_overlap 112648, overlap 112650 GAATGGCGTAAAAAA CATGCT GGT AGCAAG TCGTTTTTTAATGAA A1E_00500 112279 - 114696 + | Type IV secretion/conjugal transfer ATPase, VirB4 family protein TERM 111 114752 - 114719 - f 80 -8.3 -4.13561 | gap 1, opp_overlap 114727, overlap 114720 GTGTGTCAAAAAAGA CTGT-CATACCGTGGC TTG ACCACGGTATATACAA AAACAACCAATAATA TERM 112 114751 - 114720 - f 78 -9.6 -3.07655 | gap 1, opp_overlap 114727, overlap 114719 TGTGTCAAAAAAGAC TGT-CATACCGTGGC TTG ACCACGGTATATACA AAAACAACCAATAAT TERM 113 114727 - 114743 + F 77 -9.4 -2.87132 | opp_overlap 114720 114719 AAAAAGACTGTCATA CCGTGG CTTGA CCACGG TATATACAAAAACAA A1E_00505 114838 - 118152 + | TrbL/VirB6 plasmid conjugative transfer protein TERM 114 119951 - 119967 + G 75 -8.1 -3.72576 | GCAGTAAATGCACGT TCAACTA AAA TAGTTGA TTTAGTAAAGAAAGG A1E_00510 118139 - 120157 + | TrbL/VirB6 plasmid conjugative transfer protein A1E_00515 120164 - 123070 + | VirB6-like protein of the type IV secretion system TERM 115 124614 - 124600 - g 89 -8.6 -4.68424 | TAAGTTAGTGAAAAA TTCTGC AGT GCAGAA TATAGCTAAAGCTGC TERM 116 124724 - 124734 + G 80 -5.4 -5.26875 | opp_overlap 124724 124722 CGTATATGCAAAATA GCTA TAG TAGC TTTTTTACTTAGAGA A1E_00520 123077 - 125743 + | hypothetical protein TERM 117 125961 - 125987 + G 78 -9.6 -3.33696 | opp_overlap 125959 125961, overlap 125959 TTATCAAATTTAATA TCTCTTCTAGAT ATG ATTTGGAAGAGA TTACTTCAAGACAGG TERM 118 126065 - 126049 - g 71 -6.6 -4.13995 | opp_overlap 126049 TGCTTATAAAGTAAA CGGTTA TCCTT TAACCG TTATGGTAAGACCGT TERM 119 128732 - 128708 - g 71 -8 -3.27923 | opp_overlap 128711, overlap 128704 128711 GTGGAATATTATCAA GAATTAGCTC AAAGA AAGCTAATTC ATGAGGTACGTAGTA A1E_00525 125852 - 129292 + | hypothetical protein A1E_00540 130793 - 130897 + | GTPase EngB A1E_00545 130964 - 131041 + | hypothetical protein A1E_00550 132049 - 132165 + | hypothetical protein A1E_00555 132389 - 132664 + | hypothetical protein trmD 132753 - 133415 + | tRNA (guanine-N(1)-)-methyltransferase TERM 120 133420 - 133453 + F 74 -8.3 -3.66666 | AAGATTTATAGAGTG TCAATAGCAAATTAC TTAT GTACATTGCTATTGA TTTAGAAATTTTAGA TERM 121 133566 - 133598 + F 79 -9.4 -3.28785 | opp_overlap 133551 133566, overlap 133573 TATATAATGAATTTA TATAAAAGGTGGAG TTGCC TTTCACCTTTTATA TTCAATATTTTAACC A1E_00565 133672 - 134088 + | 50S ribosomal protein L19 rplS 134600 - 134364 - | hypothetical protein A1E_00575 134672 - 135604 + | preprotein translocase subunit SecF A1E_00580 135718 - 136980 + | NADH dehydrogenase I subunit F secF 137144 - 137941 + | preprotein translocase subunit SecF rnc 137941 - 138624 + | ribonuclease III era 138617 - 139504 + | GTP-binding protein Era A1E_00600 139628 - 140170 + | Holliday junction resolvase A1E_00605 140172 - 140864 + | tRNA/rRNA methyltransferase A1E_00610 142102 - 141014 - | hypothetical protein A1E_00615 143205 - 142099 - | Mrp protein A1E_00620 143306 - 144346 + | protease activity modulator HflK TERM 122 145314 - 145299 - g 75 -4.8 -5.00895 | TTTAGTATATAAAAA TTCTTT AAAG AAAGAA GATACTAAGTTTGTA A1E_00625 144517 - 145377 + | hflc protein (hflc) TERM 123 145657 - 145637 - g 76 -6.1 -4.63172 | TAGTAAATCAGAAAA TGCCGAGAA AGA TCCTCTGCA AGAAAAAAAACCTTT ruvC 145398 - 146933 + | Holliday junction resolvase TERM 124 147688 - 147703 + G 74 -5.4 -4.77036 | AAGAATAATTTATGG CAAGGC GAGT GCTTTG TTTTTGATGATAGAA A1E_00635 147028 - 147777 + | hypothetical protein A1E_00640 147799 - 148173 + | succinate dehydrogenase cytochrome b-556 subunit A1E_00645 148506 - 148625 + | hypothetical protein A1E_00650 149004 - 149381 + | hypothetical protein TERM 125 149865 - 149876 + G 74 -7.2 -4.14392 | opp_overlap 149864 ATATGTGTAAGAACG CCGC TGAT GCGG TTTTAGAGCTTGAGC A1E_00655 149579 - 151369 + | succinate dehydrogenase flavoprotein subunit A1E_00660 151509 - 151411 - | hypothetical protein TERM 126 151469 - 151483 + g 71 -2.1 -5.48514 | GTAAAAATAATAAAA TGCTG TAAAC TAGCA TTTTTATTTCTTCCT TERM 127 151510 - 151520 + H 71 -4 -5.08601 | opp_overlap 151510 TCCTTGTTTAGTCAA TTAC TTC GTAA TTTTTCTTGCCATGA sdhA 151578 - 152234 + | succinate dehydrogenase flavoprotein subunit TERM 128 152326 - 152355 + F 95 -12.3 -3.50045 | opp_overlap 152326, overlap 152331 AGAAATGATTTAAAA CTAAAGGGTGGAG TGTT TTTCACCCTTTAG TTATCGTATATAAGT TERM 129 152355 - 152326 - f 88 -9.4 -4.26681 | opp_overlap 152326 152331 AGAAATGATTTAAAA CTAAAGGGTGGA GTGTTT TTCACCCTTTAG TTATCGTATATAAGT rpsL 152392 - 152781 + | 30S ribosomal protein S12 A1E_00675 152809 - 153291 + | 30S ribosomal protein S7 A1E_00680 153304 - 155376 + | elongation factor G TERM 130 155500 - 155516 + F 73 -3.1 -5.45652 | opp_overlap 155495 TAATAGCAAATATTT TTAATAA ATC TTATTGA TTTTTTATTAAAAAT secE 155746 - 156009 + | preprotein translocase subunit SecE nusG 156025 - 156603 + | transcription antitermination protein NusG TERM 131 156674 - 156690 + F 77 -5.2 -5.16071 | opp_overlap 156674 TTTTTTAATACCAAG TGAAAC CAGCT GTTTCA TTTTTATTACTCATT TERM 132 156886 - 156902 + G 74 -9.4 -2.62184 | ATCATTCCGGCTGCC GGGGCA ACTCC TGCCCC TCCTATAGGGCCGGC rplK 156835 - 157272 + | 50S ribosomal protein L11 rplA 157278 - 157997 + | 50S ribosomal protein L1 rplJ 158282 - 158791 + | 50S ribosomal protein L10 rplL 158823 - 159200 + | 50S ribosomal protein L7/L12 TERM 133 159419 - 159477 + F 70 -8.8 -2.54841 | gap 1, opp_overlap 159416 159425, overlap 159432 159466 159468 GCTTTAAATTCACTT TTTAAA-TAAAAAAGCCTTATTTTAGT GATTAA ATTTGAATAAGGCTTTTTTATTTTAAA ATAATTTTATTAACG TERM 134 159432 - 159463 + F 81 -3.1 -5.79595 | opp_overlap 159425, overlap 159419 TTTTTAAATAAAAAA GCCTTATTTTAGT GATTAA ATTTGAATAAGGC TTTTTTATTTTAAAA TERM 135 160226 - 160244 + G 77 -9 -3.24289 | overlap 160235 AAGTTATGCTGCTCC TCTTAAAG TTA CTTTAAGA TTAAGTATTTGGGAT TERM 136 163934 - 163955 + G 74 -7.3 -3.98159 | CGGTGAAAATAATTT TGAATCAGG CATT CCTGAGTCA TTTAATGTTATGATA rpoB 159903 - 164024 + | DNA-directed RNA polymerase subunit beta TERM 137 165580 - 165594 + G 74 -8.6 -3.18738 | overlap 165579 ACCCGCTTGTTTGTG CTGCAT TTA ATGCAG ATTTTGATGGTGATC A1E_00720 164217 - 168353 + | DNA-directed RNA polymerase subunit beta' TERM 138 168348 - 168358 + T 73 -5.4 -4.72386 | opp_overlap 168348 ATAAATGCTGACAAA GGAT AAG ATCC TTTTTAAATACTTTA A1E_00725 169487 - 168570 - | DNA-directed RNA polymerase subunit beta' TERM 139 169126 - 169169 + g 70 -3.9 -4.99638 | opp_overlap 169138, overlap 169127 TTCCAAAATTTTATT ATTTTAGAAAAAGCCGGAA TATATT TACCGGCCTTTGCTAAAAA TTTTTGTATAAATGT TERM 140 169127 - 169168 + g 70 -7.4 -3.58698 | opp_overlap 169138, overlap 169126 TCCAAAATTTTATTA TTTTAGAAAAAGCCGGAA TATATT TACCGGCCTTTGCTAAAA ATTTTTGTATAAATG TERM 141 169157 - 169138 - G 72 -4.9 -4.86001 | opp_overlap 169127 169126 ATTATTTTAGAAAAA GCCGGAA TATATT TACCGGC CTTTGCTAAAAATTT TERM 142 170238 - 170262 + G 72 -5.7 -4.39877 | TACATCTCAAACATT TGCATCTTTAG TTG CTAGCGGTGCA TTTCTTGCTTCTTAC TERM 143 170397 - 170409 + G 70 -4.1 -5.00884 | overlap 170396 AGTCAAAAAATTAGT TGCTG AGG CAGTA TTTTTTACAAGAGAT A1E_00730 169864 - 171366 + | leucyl aminopeptidase TERM 144 171548 - 171509 - f 95 -11 -4.21462 | opp_overlap 171521, overlap 171510 ACCCATTATTTAAAA CTTCTTTCAAAAGTAGTA TGTA CACTACTTTTGAAAGACA AAAAGTATATTATGA TERM 145 171547 - 171510 - f 95 -12.3 -3.12395 | opp_overlap 171521, overlap 171509 CCCATTATTTAAAAC TTCTTTCAAAAGTAGTA TGTA CACTACTTTTGAAAGAC AAAAAGTATATTATG TERM 146 171609 - 171624 + G 71 -7.6 -3.5399 | opp_overlap 171606 171605 ATGAAAAAGGAGGAG CAGGTA AAAC TACCTG TTCTATGCATCTAAT A1E_00735 171560 - 172354 + | hypothetical protein A1E_00740 172435 - 172866 + | leucyl aminopeptidase TERM 147 174294 - 174277 - g 72 -7.1 -3.797 | overlap 174275 TTAAATGAAGAAACA GCTAAAA TTGA TTTTAGC CATAATCCATTTTCT TERM 148 174313 - 174323 + G 75 -8.2 -3.74224 | overlap 174307 AATCCATTTTCTATG CCGC AAG GCGG TTTAGATGCTTTAAA TERM 149 174700 - 174688 - g 80 -7.7 -4.19624 | TATGTGGAAGATAAA GCTCT AAA AGAGC TAGGCATTATGCTCT A1E_00745 172942 - 174750 + | aspartyl-tRNA synthetase TERM 150 175117 - 175093 - T 78 -8.7 -3.87149 | GTCACTAAACTCAAA TAGCGAATTAT TAC ATAACCCGCTA CTACTAGTGATCACC aspS 175892 - 175182 - | aspartyl-tRNA synthetase A1E_00755 176680 - 175958 - | dihydrodipicolinate reductase TERM 151 176145 - 176164 + g 100 -9.4 -5.85737 | opp_overlap 176143 176147 TTGCCACCACGAAGT GAGGAAAT ACCT ATTTCCTC TTTTTTTCTTGGTCT A1E_00760 177170 - 176688 - | hypothetical protein A1E_00765 177880 - 177155 - | dihydrodipicolinate reductase A1E_00770 177960 - 177877 - | hypothetical protein TERM 152 177913 - 177943 + g 100 -12.8 -3.83026 | TTTGAGCATGTCCTG TGTCATACCATGAT CAA ATTGTGGTATGACA TTTGGTATAGAAAAC gatB 179411 - 177960 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 153 178275 - 178301 + g 100 -11.8 -4.10407 | opp_overlap 178282, overlap 178282 TAATTTTATTAATTT TGCAAAGTTACT GGG AGTAATTTTGCA TTTACTTATTCCTAT gatA 180895 - 179414 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 181200 - 180898 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 154 181158 - 181172 + g 72 -2.8 -5.4111 | CTTCAAATTTTAATC TAGCTA ATT TTGCTA TTTTTTGTGCTTCTT frr 181930 - 181370 - | ribosome recycling factor TERM 155 181864 - 181882 + g 70 -4.6 -4.80396 | overlap 181866 GTCCTTTAAGCTCAT GATCTAAA ACT TTTAGAGC TTTTTCCATCTTTTC pyrH 182662 - 181934 - | uridylate kinase A1E_00800 182991 - 182659 - | putative monovalent cation/H+ antiporter subunit E A1E_00805 184537 - 182975 - | multidrug resistance protein B TERM 156 184688 - 184678 - H 84 -4 -5.79595 | opp_overlap 184678 GTTTAAAATAAAAAA TTGT TGT ACAA CTTTTAATTTTTAAC A1E_00810 184863 - 185066 + | hypothetical protein TERM 157 185101 - 185069 - T 83 -10.1 -3.26767 | opp_overlap 185069 185073, overlap 185073 185080 AATAGTTAATTAACA CGAATAGCAAATTAT GAC ATAATCTGCTATTTG GTTTAAAAAGTTGAA TERM 158 185069 - 185101 + T 78 -10.1 -2.74322 | opp_overlap 185069 185073 185080, overlap 185073 AATAGTTAATTAACA CGAATAGCAAATTAT GAC ATAATCTGCTATTTG GTTTAAAAAGTTGAA TERM 159 185073 - 185097 + T 72 -7.3 -4.06055 | opp_overlap 185073 185069 185080, overlap 185069 GTTAATTAACACGAA TAGCAAATTAT GAC ATAATCTGCTA TTTGGTTTAAAAAGT TERM 160 185097 - 185073 - T 82 -9.5 -3.42147 | opp_overlap 185069 185073, overlap 185069 185080 GTTAATTAACACGAA TAGCAAATTAT GAC ATAATCTGCTA TTTGGTTTAAAAAGT TERM 161 185659 - 185639 - T 70 -7.7 -3.51161 | opp_overlap 185639 185640, overlap 185640 GAAATCTCCACAGAA CTTAGGATA TTT TATCCTAAA TTTGTATTTGGAAAG TERM 162 185658 - 185640 - T 73 -9 -2.70215 | opp_overlap 185639 185640, overlap 185639 AAATCTCCACAGAAC TTAGGATA TTT TATCCTAA ATTTGTATTTGGAAA TERM 163 185640 - 185658 + T 78 -9 -3.19232 | opp_overlap 185640 185639, overlap 185639 AAATCTCCACAGAAC TTAGGATA TTT TATCCTAA ATTTGTATTTGGAAA TERM 164 185709 - 185723 + T 74 -8.6 -3.26947 | TGAACCCCAGACCTA CGCATT ACG AATGCG TTGCTCTACCAGTTG A1E_00815 188276 - 185970 - | Outer membrane protein omp1 TERM 165 188392 - 188416 + r 81 -7.4 -4.64861 | opp_overlap 188392 188391 GGAATATAATAAAAC CATATAAAAA ACTTG TTTTTATATG TTTATTTTACCAACA A1E_00820 189656 - 188580 - | putative monovalent cation/H+ antiporter subunit E TERM 166 189241 - 189263 + g 83 -10.6 -3.21395 | opp_overlap 189262, overlap 189239 TCTGCTGTCTCTGCC GGTGATGAAG CTA CTACATCACC TATTATAGGAGGAAT TERM 167 189839 - 189818 - H 100 -7.3 -6.55664 | CAAAATAAAAAAAAA GACTGGATC CTGT GATCGAGTC GCGGGATGACAAACA A1E_00825 189855 - 190391 + | transcription antitermination protein NusB A1E_00830 190388 - 191071 + | ribosomal RNA large subunit methyltransferase J TERM 168 191075 - 191097 + T 71 -7.8 -3.64599 | opp_overlap 191075 AATAAGAAATAAAAA TTACCCTCAA TAG TTGAGGATAA TTTAAGATATAATAC TERM 169 191097 - 191075 - T 100 -10 -5.52807 | opp_overlap 191075 AATAAGAAATAAAAA TTACCCTCAA TAG TTGAGGATAA TTTAAGATATAATAC A1E_00835 191339 - 191118 - | hypothetical protein A1E_00840 192448 - 191333 - | hypothetical protein nusB 193562 - 193122 - | transcription antitermination protein NusB A1E_00850 194923 - 194099 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase A1E_00855 195003 - 195623 + | hypothetical protein TERM 170 195909 - 195884 - T 100 -12.1 -5.10154 | opp_overlap 195884 ATCTAAAAGTAAAAA TACCTATAAGT TAAA ACTTATAGGTA TTACTCTAAAGATAT TERM 171 195884 - 195909 + T 95 -12.1 -3.26649 | opp_overlap 195884 ATCTAAAAGTAAAAA TACCTATAAGT TAAA ACTTATAGGTA TTACTCTAAAGATAT A1E_00860 196302 - 195946 - | hypothetical protein A1E_00865 197303 - 196452 - | cytochrome c oxidase subunit III TERM 172 197119 - 197107 - G 74 -6.3 -4.3587 | CACCAAGAATATAAA CAGTA AAC TACTG AAATAACTCCTGCAG dapD 198440 - 197901 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 173 198134 - 198151 + g 82 -6.3 -5.08601 | CTTCTTCTACACTCT CGGTAAT AAGC ATTGCCG TTTTTATTCCCATCA A1E_00875 199560 - 198589 - | DNA polymerase III subunit delta TERM 174 199056 - 199074 + g 76 -7.4 -4.18762 | opp_overlap 199055 TACAAACTAGATTAT GATCACCT TTT AGGTGAGC TTTTAAATAAGCATT TERM 175 199185 - 199175 - G 77 -8.2 -3.85864 | opp_overlap 199172 TCATCATGATAACAA GCGG TTG CCGC TAAATATTCTTCCGT TERM 176 199691 - 199713 + r 82 -9.4 -3.35798 | opp_overlap 199696, overlap 199696 CACTTAAAAATATTC TAAAATACAA ATA TTGTATTTTA TTGTACATAGAACCT TERM 177 199696 - 199708 + r 70 -4.9 -4.79352 | opp_overlap 199696, overlap 199691 AAAAATATTCTAAAA TACAA ATA TTGTA TTTTATTGTACATAG A1E_00880 200197 - 199727 - | hypothetical protein A1E_00885 200419 - 200691 + | hypothetical protein A1E_00890 200969 - 200877 - | hypothetical protein holA 203139 - 201646 - | DNA polymerase III subunit delta TERM 178 202068 - 202054 - G 70 -4.2 -5.00884 | opp_overlap 202054, overlap 202056 ATCGGTTTCAAAAAA TATGGC ACC GCCAAA ATTTACCATTTTAGT TERM 179 202066 - 202056 - G 71 -6.8 -4.13561 | opp_overlap 202054, overlap 202054 CGGTTTCAAAAAATA TGGC ACC GCCA AAATTTACCATTTTA TERM 180 202267 - 202289 + g 70 -7.1 -3.67498 | gap 1, opp_overlap 202264 GGCTTTTAAAAGCTT TTC-AGCAGG TGAG CCTGCTAGAA TTGTCTTAACGCTTA A1E_00900 203206 - 205089 + | molecular chaperone DnaK TERM 181 205172 - 205150 - f 84 -10.6 -3.0464 | AATGGATTCCTAAGA TCCCGCAG TCAAAAG CTGCGGGA TGATAACCATGTTTA TERM 182 205253 - 205239 - g 70 -6.4 -4.2558 | TAGGTGTTAGTAAAA CAGCTA GTT CAGCTG AGCTTAAAAAAGCTT TERM 183 205277 - 205265 - g 70 -4.1 -5.0538 | opp_overlap 205255 GCTGAGCTTAAAAAA GCTTA TCA CAAGC TAGCTAAACAATATC A1E_00905 205199 - 206326 + | hypothetical protein A1E_00910 206461 - 206649 + | hypothetical protein A1E_00915 206730 - 207473 + | hypothetical protein A1E_00920 207631 - 209271 + | DNA repair protein RecN TERM 184 209743 - 209729 - g 76 -8.6 -3.54885 | overlap 209727 209737 GAGAGAAAGATAACA GATGCA AAT TGCATC GATGAGCAACTACAA TERM 185 209781 - 209765 - g 71 -8.1 -3.21909 | overlap 209764 CAACTACAAAAGAAG TTAGTAG CTG CTACTAA TAAAGCAGAACTTGT dnaK 209552 - 210946 + | molecular chaperone DnaK kgd 211183 - 213972 + | alpha-ketoglutarate decarboxylase TERM 186 214010 - 214030 + F 78 -9.7 -3.07455 | AAAATTAAGTTGTTA TCCCGCGAT TTG ATCACGGGA TCTAGTTTATACTAA A1E_00935 214141 - 215346 + | dihydrolipoamide acetyltransferase A1E_00940 215505 - 215921 + | hypothetical protein A1E_00945 215924 - 216388 + | periplasmic divalent cation tolerance protein TERM 187 216649 - 216639 - g 79 -8.2 -3.97444 | opp_overlap 216639 AGAGTAGGAATGAAA GCGG TAG CCGC TTTTTTAGGTACTAC TERM 188 216639 - 216649 + G 91 -8.2 -5.1101 | opp_overlap 216639 AGAGTAGGAATGAAA GCGG TAG CCGC TTTTTTAGGTACTAC TERM 189 216765 - 216781 + G 74 -2.3 -5.65177 | ACGACAAGCAGAACT TCATTTA ATA TAATTGA TTTTTTTGTAAATAT TERM 190 216841 - 216851 + G 77 -4 -5.38348 | CAAAGGGTGATGTCT TACA AGT TGTA TTTTTTGCTATTTTT TERM 191 217419 - 217439 + G 73 -8.2 -3.4914 | overlap 217417 CTTGGATCTATTGGT GGTGCCGG TATTC CCGGTGCC TCTTTGATAATGCTT A1E_00950 216429 - 217628 + | proton/sodium-glutamate symport protein A1E_00955 217966 - 218178 + | dihydrolipoamide acetyltransferase A1E_00960 219831 - 219739 - | hypothetical protein A1E_00965 221236 - 220076 - | coproporphyrinogen III oxidase TERM 192 220527 - 220509 - G 71 -7.6 -3.484 | opp_overlap 220508 220523, overlap 220514 220516 CTTACTAGAGCATAA TTAGATAT CTC ATATCTAA AATATTTTTTAGATT A1E_00970 221672 - 221532 - | transposase A1E_00975 223405 - 222056 - | coproporphyrinogen III oxidase A1E_00980 224395 - 223601 - | DNA polymerase III subunit delta' A1E_00985 225025 - 224693 - | DNA-binding protein HU TERM 193 225413 - 225439 + H 73 -5.2 -4.69326 | opp_overlap 225406 225420, overlap 225415 225420 CACAATAATATATTT TATAAAAGGTAG AAA CCACCTTTTATC TTTTATATTCAATAT TERM 194 225415 - 225437 + H 75 -7.8 -3.95375 | opp_overlap 225406 225420, overlap 225413 225420 CAATAATATATTTTA TAAAAGGTAG AAA CCACCTTTTA TCTTTTATATTCAAT TERM 195 225461 - 225495 + H 100 -13.8 -2.60723 | opp_overlap 225466 225468, overlap 225461 225468 ATTCAATATTTCTCA TTGAATAGCGGATTAT GTA ATAATCCGCTATTCGC ATTAATTCAGAATAA TERM 196 225461 - 225496 + H 95 -12.2 -3.34895 | gap 1, opp_overlap 225466 225468, overlap 225461 225468 ATTCAATATTTCTCA T-TGAATAGCGGATTAT GTA ATAATCCGCTATTCGCA TTAATTCAGAATAAA TERM 197 225490 - 225466 - H 100 -14.5 -3.05935 | opp_overlap 225461 225461 225468, overlap 225468 ATATTTCTCATTGAA TAGCGGATTAT GTA ATAATCCGCTA TTCGCATTAATTCAG TERM 198 225468 - 225488 + H 100 -12.7 -3.11178 | opp_overlap 225468 225466, overlap 225461 225461 ATTTCTCATTGAATA GCGGATTAT GTA ATAATCCGC TATTCGCATTAATTC TERM 199 225488 - 225468 - H 100 -12.7 -3.08798 | opp_overlap 225461 225461 225468, overlap 225466 ATTTCTCATTGAATA GCGGATTAT GTA ATAATCCGC TATTCGCATTAATTC A1E_00990 225535 - 228561 + | hydrophobe/amphiphile efflux-1 HAE1 family protein A1E_00995 228648 - 228857 + | hypothetical protein A1E_01000 229743 - 228970 - | hypothetical protein TERM 200 229551 - 229564 + g 71 -5.3 -4.72846 | opp_overlap 229558 ACTGTTCTTTAAGCT TAACC GATA GGTTA TTTTTACCTATATCA A1E_01005 230386 - 230225 - | hypothetical protein A1E_01010 230709 - 230518 - | bifunctional penicillin-binding protein 1C A1E_01015 231923 - 232018 + | hypothetical protein TERM 201 232641 - 232619 - T 73 -7.8 -3.73008 | TGGAAAGATAGAGAA GGTAATGAAA CCA TTGCATTACC AACGCAGTACAAAGT A1E_01020 233386 - 232940 - | hypothetical protein A1E_01025 234346 - 233396 - | hypothetical protein A1E_01030 235421 - 234351 - | hypothetical protein TERM 202 234554 - 234568 + g 71 -2.2 -5.40072 | overlap 234539 234564 234566 TAATTGCCTTAGCAA TAATTG TTT TAATTA TTTTTTTAGAAAAAA A1E_01035 235772 - 235434 - | DNA polymerase III subunit delta' hscA 237771 - 235834 - | chaperone protein HscA hscB 238262 - 237762 - | co-chaperone HscB rnhB 238535 - 239125 + | ribonuclease HII A1E_01055 241247 - 239262 - | excinuclease ABC subunit B TERM 203 240627 - 240606 - G 74 -6.7 -4.16842 | gap 1, opp_overlap 240605 TTCATTGCCAACAAA CGATAAACGC CAA GC-TTTATCG CTATAATGTGATGGA A1E_01060 241318 - 241629 + | glutaredoxin, GrxC family protein TERM 204 241891 - 241881 - f 77 -3.2 -5.74288 | ATAAATAATAAAAAA GAAG TGG CCTC GTAGTTGGAAAATAA A1E_01080 243888 - 243989 + | hypothetical protein A1E_01085 244036 - 244212 + | hypothetical protein A1E_01090 244206 - 244334 + | hypothetical protein A1E_01095 248340 - 245722 - | ATP-dependent helicase TERM 205 246033 - 246015 - G 82 -8.8 -4.02093 | overlap 246017 CACATAATATAACAA TAGGGGCT TCA AGCCCCTT AGAGCCGTGTACAGT TERM 206 246031 - 246017 - G 93 -11.4 -3.58527 | overlap 246015 CATAATATAACAATA GGGGCT TCA AGCCCC TTAGAGCCGTGTACA TERM 207 246541 - 246555 + g 87 -8.6 -4.32669 | overlap 246538 TATCTCAATCTTAAG CTTAGC TTT GCTAAG TTCTTTTATCAAATT A1E_01100 249222 - 248521 - | excinuclease ABC subunit B TERM 208 249332 - 249348 + r 71 -8.7 -2.83164 | overlap 249344 TTTTTTAACTGGATA CTGTGGT CAA ACCACGG TATAATACTGAGTGC A1E_01105 250111 - 249422 - | DNA polymerase III subunit epsilon A1E_01110 250674 - 250099 - | dephospho-CoA kinase TERM 209 250522 - 250563 + g 93 -6.1 -5.64274 | opp_overlap 250525, overlap 250525 250527 CTCAAGTTCAGGTAG TAATTTCAAGATTTGAG TTTGCACT CTCAAATCTTGATATAA TTTTTTTATACATCG TERM 210 250525 - 250560 + g 71 -7.8 -3.56036 | opp_overlap 250525, overlap 250522 250527 AAGTTCAGGTAGTAA TTTCAAGATTTGAG TTTGCACT CTCAAATCTTGATA TAATTTTTTTATACA TERM 211 250527 - 250558 + g 83 -10.4 -3.33657 | opp_overlap 250525, overlap 250525 250522 GTTCAGGTAGTAATT TCAAGATTTGAG TTTGCACT CTCAAATCTTGA TATAATTTTTTTATA A1E_01115 251480 - 250668 - | hypothetical protein TERM 212 252305 - 252295 - g 70 -4 -5.11112 | overlap 252254 AAATTCTAACAAAAA TTCA GCA TGAA AATTTATATTGGGAT coaE 252225 - 252704 + | dephospho-CoA kinase rnhA 252709 - 253176 + | ribonuclease H TERM 213 253232 - 253258 + G 74 -7.5 -3.91716 | AGATGAGTTTTTGAA TCAATATTATG AAAGC CGTAATATTGA TTATTTAGGACGTCC A1E_01130 253164 - 253607 + | hypothetical protein A1E_01135 253629 - 254081 + | ABC transporter substrate binding protein TERM 214 254106 - 254126 + T 78 -2.5 -5.79595 | AATCATTAAATTCAG CCTAATCTA TTT TAGATGCGG TTTTTTATTTTAAAA TERM 215 254562 - 254589 + T 71 -7.8 -3.69333 | opp_overlap 254556 254553, overlap 254563 AAGTAATAATTTATT TCTTGGTTTAGG TAAC TCTAAACCAAGC TTTAAATCAATTCTA TERM 216 254563 - 254588 + T 89 -11.3 -2.81118 | opp_overlap 254556 254553, overlap 254562 AGTAATAATTTATTT CTTGGTTTAGG TAAC TCTAAACCAAG CTTTAAATCAATTCT A1E_01140 254877 - 254695 - | hypothetical protein A1E_01145 255361 - 255621 + | hypothetical protein TERM 217 256192 - 256208 + T 74 -3.8 -5.29782 | ATATACATATGGTAG TAATTC TTAAT GAATTA TTTTTTCTACCTCTA TERM 218 256367 - 256383 + T 74 -6.7 -4.36508 | GAAATAATAAATGGT CATTATT ATT AATAATG TTATTCTTTTTATAA TERM 219 257095 - 257081 - T 75 -5.8 -4.72729 | TAATTAAAAGCAAAA GTTAAA AAA TTTAAC AAATAATTTTTATTT A1E_01150 257229 - 257158 - | hypothetical protein A1E_01155 257397 - 257257 - | hypothetical protein A1E_01160 258853 - 259002 + | hypothetical protein TERM 220 259164 - 259150 - T 75 -8.6 -3.37464 | opp_overlap 259142, overlap 259142 GTATGAACCGTATAA CGGTTT AGC AAACCG TCGCCTTCAGCCACT A1E_01165 259483 - 259271 - | hypothetical protein A1E_01170 260217 - 260074 - | hypothetical protein A1E_01175 261450 - 260563 - | hypothetical protein A1E_01180 261693 - 261899 + | hypothetical protein A1E_01185 263214 - 265898 + | DNA gyrase subunit A TERM 221 266137 - 266102 - f 100 -8.6 -5.2204 | opp_overlap 266104 266113, overlap 266105 266113 GATAATCAAGAAAAA TAATAAAAAAATGCTA AAAT TAGCATTTTTTTACTG GATTGCTTAGTCAAT TERM 222 266104 - 266135 + F 73 -9 -2.61216 | opp_overlap 266102 266105 266113, overlap 266113 TAATCAAGAAAAATA ATAAAAAAATGCTA AAAT TAGCATTTTTTTAC TGGATTGCTTAGTCA TERM 223 266134 - 266105 - f 100 -12.5 -4.67357 | opp_overlap 266104 266113, overlap 266102 266113 AATCAAGAAAAATAA TAAAAAAATGCTA AAAT TAGCATTTTTTTA CTGGATTGCTTAGTC TERM 224 266126 - 266113 - f 100 -5.3 -6.04419 | opp_overlap 266104 266113, overlap 266105 266102 AAAATAATAAAAAAA TGCTA AAAT TAGCA TTTTTTTACTGGATT TERM 225 266113 - 266126 + F 82 -5.3 -5.54894 | opp_overlap 266113 266105 266102, overlap 266104 AAAATAATAAAAAAA TGCTA AAAT TAGCA TTTTTTTACTGGATT A1E_01190 266245 - 266418 + | hypothetical protein A1E_01195 266797 - 266693 - | hypothetical protein def 266962 - 267489 + | peptide deformylase A1E_01205 267486 - 268397 + | methionyl-tRNA formyltransferase A1E_01210 268733 - 268897 + | hypothetical protein TERM 226 269013 - 269003 - T 71 -2.6 -5.49579 | TCATAAAAAATAAAA TAAT AAA ATTA AAATTATTTGAAATT TERM 227 272397 - 272421 + T 74 -3.8 -5.26155 | gap 1 TAATTATCTTTCTTG TTATGAG-ATA CTTT TATACTCATAA TTTTTATCTTTGTCT fmt 274213 - 273032 - | methionyl-tRNA formyltransferase TERM 228 273409 - 273394 - G 80 -7.6 -4.18018 | TTTTTCTACCTAAAA CCTCAA TATT TTGAGG AGTGAAATTAGTAGA TERM 229 274622 - 274639 + r 70 -8.5 -2.61042 | opp_overlap 274620 274621, overlap 274621 GGGCAGAGGAAGATG GCAGATA TTAA TATCTGC ATGTTCATTATTATC A1E_01220 275893 - 274733 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 230 275671 - 275684 + g 76 -5.3 -5.01546 | CCCTATAAGCGAGTT TAGAC AGAG GTCTA TTTTTCTCTAAATTT A1E_01225 278298 - 276529 - | multidrug ABC transporter ATP-binding protein TERM 231 277161 - 277133 - G 90 -8.1 -4.85545 | AGCAAACTAATAAAA GTCGTTTTTCCCG AAC CGGAAAATCCGAC TAGTCCTACTTTTTG A1E_01230 278483 - 278755 + | hypothetical protein A1E_01235 278927 - 280291 + | cytochrome d ubiquinol oxidase subunit I A1E_01240 280975 - 281994 + | cytochrome d ubiquinol oxidase subunit II TERM 232 282167 - 282197 + F 75 -7.9 -4.04491 | opp_overlap 282174, overlap 282168 282174 GACTACGGGGTCTAG TTAAAAATACTAA GATTA TTAGTATTTTTAG TTGTTGTTATGGATT TERM 233 282168 - 282196 + F 76 -9.2 -3.0161 | opp_overlap 282174, overlap 282167 282174 ACTACGGGGTCTAGT TAAAAATACTAA GATTA TTAGTATTTTTA GTTGTTGTTATGGAT TERM 234 282174 - 282190 + F 71 -3.8 -5.03201 | opp_overlap 282174, overlap 282168 282167 GGGTCTAGTTAAAAA TACTAA GATTA TTAGTA TTTTTAGTTGTTGTT A1E_01245 282300 - 283106 + | Beta 1,4 glucosyltransferase A1E_01250 283084 - 284325 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase A1E_01255 284335 - 285045 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 235 285719 - 285692 - g 86 -9.4 -4.06719 | AAAAATTAGCAGAAA GCATTAGTAATT CTGT AATTACTAATAC TAAAACATCGGATAA A1E_01260 285235 - 286830 + | phosphoribosylaminoimidazole-succinocarboxamide synthase A1E_01265 287042 - 288949 + | threonyl-tRNA synthetase A1E_01270 289923 - 290054 + | hypothetical protein A1E_01275 290768 - 290550 - | hypothetical protein TERM 236 290894 - 290946 + r 74 -8.8 -3.32914 | opp_overlap 290898 290899 290912 290917, overlap 290899 290912 290917 ATATTTTCTTCTATA TAAAGCGGTGTTTACTAAGATA ACAGCTAAC TATATCAGTAAACACCGTTTTA TTGATATAGTTAGCT TERM 237 290942 - 290898 - R 70 -6.6 -4.03234 | opp_overlap 290894 290899 290912 290917, overlap 290899 290912 290917 TTTCTTCTATATAAA GCGGTGTTTACTAAGATAAC AGCTA ACTATATCAGTAAACACCGT TTTATTGATATAGTT TERM 238 290899 - 290941 + r 77 -6.5 -4.76075 | opp_overlap 290898 290899 290912 290917, overlap 290894 290912 290917 TTCTTCTATATAAAG CGGTGTTTACTAAGATA ACAGCTAAC TATATCAGTAAACACCG TTTTATTGATATAGT TERM 239 290941 - 290899 - R 81 -10.1 -3.01726 | opp_overlap 290899 290894 290912 290917, overlap 290898 290912 290917 TTCTTCTATATAAAG CGGTGTTTACTAAGATAAC AGCTA ACTATATCAGTAAACACCG TTTTATTGATATAGT TERM 240 290967 - 290912 - R 100 -22.5 -3.14211 | opp_overlap 290899 290894 290912 290917 290963, overlap 290899 290898 290917 AGCGGTGTTTACTAA GATAACAGCTAACTATATCAGTAAA CACCGT TTTATTGATATAGTTAGCTGTTATC TTATAATTGGTTATT TERM 241 290912 - 290967 + r 100 -24.7 -3.584 | opp_overlap 290899 290898 290912 290917, overlap 290899 290894 290917 290963 AGCGGTGTTTACTAA GATAACAGCTAACTATATCAGTAAA CACCGT TTTATTGATATAGTTAGCTGTTATC TTATAATTGGTTATT TERM 242 290962 - 290917 - R 100 -16.6 -3.71284 | opp_overlap 290899 290894 290912 290917, overlap 290899 290898 290912 TGTTTACTAAGATAA CAGCTAACTATATCAGTAAA CACCGT TTTATTGATATAGTTAGCTG TTATCTTATAATTGG TERM 243 290917 - 290962 + r 100 -18.8 -3.79995 | opp_overlap 290899 290898 290917 290912, overlap 290899 290894 290912 TGTTTACTAAGATAA CAGCTAACTATATCAGTAAA CACCGT TTTATTGATATAGTTAGCTG TTATCTTATAATTGG TERM 244 291177 - 291198 + r 82 -8.9 -3.82261 | overlap 291172 ATGCCAAGCTGTATC GTAATTCTT GAAT AAGAATTAC TTACTTTTATTAAAC TERM 245 291480 - 291438 - R 100 -14.4 -3.6707 | opp_overlap 291454, overlap 291439 291451 291462 ACTCAATATTTTAAA CCTGCTTTGAAGAGGAGTAT AAA ATACTGCTCTCCAAAGCAAA GAAGTATATTATACC TERM 246 291479 - 291439 - R 100 -15.7 -2.7976 | opp_overlap 291454, overlap 291438 291451 291462 CTCAATATTTTAAAC CTGCTTTGAAGAGGAGTAT AAA ATACTGCTCTCCAAAGCAA AGAAGTATATTATAC TERM 247 291497 - 291451 - R 78 -9.6 -3.02043 | opp_overlap 291454, overlap 291439 291438 291462 291484 AACCTGCTTTGAAGA GGAGTATAAAATACTGCTCTCC AAA GCAAAGAAGTATATTATACCCC TAAAGCTTTTTTACC A1E_01280 291902 - 291489 - | hypothetical protein A1E_01285 292371 - 292204 - | hypothetical protein TERM 248 292493 - 292503 + H 71 -4 -5.16151 | CTCAGCTTTTGTATA TCTT TTT AAGA TTTTTATTGCCTTTA A1E_01290 293262 - 293462 + | transposase IS200-family protein A1E_01295 293377 - 293595 + | transposase IS200-family protein TERM 249 293657 - 293637 - f 95 -11.3 -4.12532 | opp_overlap 293637 293634 GTCGCTATAGACAAA CTTTCATCT CTC AGATGAAAG TGATTGATTGTTAAT TERM 250 293637 - 293657 + F 89 -11.3 -2.90373 | opp_overlap 293637, overlap 293634 GTCGCTATAGACAAA CTTTCATCT CTC AGATGAAAG TGATTGATTGTTAAT A1E_01300 293909 - 295273 + | outer membrane protein tolC precursor A1E_01305 295305 - 295673 + | hypothetical protein thrS 295853 - 297634 + | threonyl-tRNA synthetase A1E_01315 297801 - 299789 + | DNA topoisomerase IV subunit B A1E_01320 299958 - 301334 + | tail-specific protease precursor TERM 251 302072 - 302054 - g 73 -9 -2.95091 | ATTGCAAGTCATATA TTATTACC AAG GGTAATAA TAGAAAATGAGAGTG TERM 252 302099 - 302109 + G 71 -5.4 -4.72497 | AGTGACTTAACAGTG GAAG AAG CTTC TTTTGTTACTAGCTA A1E_01325 301577 - 303070 + | histidine kinase sensor protein TERM 253 303975 - 303947 - g 100 -6.8 -5.95166 | opp_overlap 303955 303966 GTGAACTAAAAAAAA CTCAGGAAGCAT GTAAT ATGCTTGCTAAG CTTGATAGGGAATTT A1E_01330 303325 - 304065 + | hypothetical protein A1E_01335 304078 - 304740 + | hypothetical protein TERM 254 305966 - 305987 + G 72 -8.9 -2.74192 | opp_overlap 305962, overlap 305964 305968 ACAAATAATCATCTA TATTTCTCT ACTG AGAGAAATA TCATATTCGGAAGTA A1E_01340 304763 - 306007 + | DNA topoisomerase IV subunit B rplM 306100 - 306576 + | 50S ribosomal protein L13 A1E_01350 306573 - 307058 + | 30S ribosomal protein S9 A1E_01355 307503 - 307691 + | D-alanyl-D-alanine dipeptidase rpsI 308111 - 308440 + | 30S ribosomal protein S9 TERM 255 308831 - 308845 + T 75 -5.8 -4.79352 | opp_overlap 308831 TGAACCCACCACAAA TTACTT CCT AAGTAA TTTTATTATAAATAA TERM 256 309003 - 308977 - T 80 -8.8 -3.97388 | opp_overlap 308977 ATACCTCATTATAAA TGCTGATCAACA AAA TAGTGATCAGCA TAATGTATGTCTAGG A1E_01365 309553 - 309068 - | dinucleoside polyphosphate hydrolase pleD 310930 - 309578 - | response regulator PleD A1E_01375 311006 - 311572 + | elongation factor P TERM 257 311584 - 311570 - f 72 -5.8 -4.49756 | GTCGAAAGAGCAAAA TAAGTA TAC TACTTA AAAAAAATGGCGTTG A1E_01380 311723 - 312466 + | extragenic suppressor protein SuhB A1E_01385 312532 - 312861 + | elongation factor P TERM 258 313137 - 313123 - g 73 -7.8 -3.70412 | opp_overlap 313127 AATTCAAGAAATTAA GGAAGC CTT GCCTCC GCCGGAATTAGGGCT A1E_01390 312893 - 313588 + | phosphatidylserine decarboxylase TERM 259 313675 - 313700 + F 70 -4.9 -4.77775 | opp_overlap 313675 AGGAATCTAGTAGAA CATATAAAAAA CAAG TTTTGTATATG TTTGTTTTATCAAAT TERM 260 314432 - 314420 - g 76 -3.5 -5.4756 | AATCTCAACAAAAAA TTTAA GTA TTAAA CCTGAGTATTTATCG A1E_01395 313815 - 314588 + | CDP-diacylglycerol--serine O-phosphatidyltransferase A1E_01400 314589 - 315641 + | multidrug resistance protein A TERM 261 316079 - 316064 - T 73 -5.4 -4.78149 | opp_overlap 316064, overlap 316057 TTGATAAGGTAAAAA TGTAGC AAAT GCCACA TCATTACAGGGTACA A1E_01405 316343 - 316140 - | hypothetical protein A1E_01410 316585 - 316343 - | hypothetical protein A1E_01415 316647 - 317888 + | phosphatidylserine decarboxylase TERM 262 318977 - 319007 + G 77 -7.8 -4.08767 | opp_overlap 318985, overlap 318978 318980 TAGAATTAGATTTTG GTATTAAAGCTATT AAA AATGGCTTTAATAA TTTTAAAGGGGTGAA TERM 263 318978 - 319006 + G 87 -11.3 -3.05046 | opp_overlap 318985, overlap 318977 318980 AGAATTAGATTTTGG TATTAAAGCTATT AAA AATGGCTTTAATA ATTTTAAAGGGGTGA TERM 264 318980 - 319004 + G 76 -9.5 -3.08211 | opp_overlap 318985, overlap 318978 318977 AATTAGATTTTGGTA TTAAAGCTATT AAA AATGGCTTTAA TAATTTTAAAGGGGT TERM 265 319453 - 319472 + G 79 -8 -3.97834 | opp_overlap 319452 319449 AGTTTTGCAAATGAG TTACCAAA AAAA TTTGGTAA TTTATGATGACGTTA murC 318046 - 319479 + | UDP-N-acetylmuramate--L-alanine ligase murB 319476 - 320369 + | UDP-N-acetylenolpyruvoylglucosamine reductase A1E_01430 320438 - 321502 + | D-alanine--D-alanine ligase A1E_01435 321499 - 322302 + | cell division protein ftsQ TERM 266 322516 - 322492 - g 83 -5.7 -5.13473 | opp_overlap 322491 322492 ATCAGATTTAAAAAA TGCGGAAACTA GTA TTGTTTCGGCA ATTTACGCACTTGAA A1E_01440 322331 - 323566 + | cell division protein FtsA TERM 267 323592 - 323570 - T 81 -8.6 -4.12198 | opp_overlap 323568 323563 323570 GAGAATGTTTGAAAA GATAAGATTT TAA AAACCTTATC TCTATTCAATATTAC A1E_01445 323946 - 323713 - | hypothetical protein TERM 268 325063 - 325046 - R 86 -5.7 -5.40464 | TATTATAAACAAAAA TTTTCTT TTAC AAGAAAA GGGTTAATTTCCTAA A1E_01450 325590 - 325123 - | hypothetical protein A1E_01455 326101 - 325580 - | cytochrome c ddl 326646 - 326819 + | D-alanine--D-alanine ligase A1E_01465 328114 - 327248 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase A1E_01470 329455 - 328307 - | hypothetical protein TERM 269 329013 - 328997 - G 77 -8.1 -3.85698 | TGTTGGTTTTATAAA TGGATTT AAT AAATCCA CCATTAAATTTCCAC TERM 270 330419 - 330406 - g 75 -2.4 -5.66229 | AGTAATAAGAAAAAA CCAA ATATTA TTGG TGCAAGTTACTAAAG TERM 271 331610 - 331597 - g 70 -3.9 -5.11063 | opp_overlap 331597 ATTATTGAAGAAAAA TAACA ATAA TGTTA ATTCTGTTAAGCCGG A1E_01475 329882 - 331948 + | ribonuclease E TERM 272 332063 - 332087 + F 70 -6 -4.32651 | opp_overlap 332044 332063 332062 TATTTGAAAAATAAG TATATAAAAA CAAGT TTTTTATATA TTTTACTGGATTCTT A1E_01480 332200 - 333171 + | cytochrome c oxidase assembly protein A1E_01485 333168 - 334079 + | ribosomal large subunit pseudouridine synthase C A1E_01490 334241 - 335422 + | penicillin-binding protein 4* A1E_01495 335423 - 336244 + | exodeoxyribonuclease III lpxC 336312 - 337301 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 273 337921 - 337931 + G 72 -2.6 -5.40072 | opp_overlap 337921 AGCTATTAGAGATGA TAAT CCA ATTA TTTTTTTGGAAAACG A1E_01505 337430 - 338416 + | pyruvate dehydrogenase subunit beta TERM 274 338613 - 338636 + T 72 -6 -4.55128 | overlap 338604 ATCACTGCAACAAGG GGTTGCTTTT AGCT AGGAGCGACC TTTTACTTTACAGCT A1E_01510 340483 - 338639 - | GTP-binding protein A1E_01515 340784 - 340918 + | hypothetical protein A1E_01520 340987 - 341250 + | hypothetical protein A1E_01525 341499 - 342005 + | pyruvate dehydrogenase subunit beta A1E_01530 342140 - 343606 + | isocitrate dehydrogenase A1E_01535 343783 - 344064 + | putative monovalent cation/H+ antiporter subunit G A1E_01540 344228 - 345277 + | putative monovalent cation/H+ antiporter subunit B TERM 275 345339 - 345350 + G 71 -3 -5.26247 | opp_overlap 345339 AATAATATAATTAAA TATC TAGT GATA TTTTGTTTGTTTTGC TERM 276 345437 - 345457 + G 91 -7.1 -5.31072 | TTTTTCGGTAATTTG TTTATTAAT TTC ATTAATAAA TTTTTCTTCTATTAT A1E_01545 345270 - 345917 + | Heme exporter protein B A1E_01550 345992 - 346393 + | hypothetical protein A1E_01555 346466 - 346999 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit A1E_01560 347008 - 348204 + | cytochrome b A1E_01565 348475 - 349143 + | cytochrome c1, heme protein precursor TERM 277 350029 - 350017 - g 75 -4.9 -4.98436 | CTAATAGCATAAAAA GTAAT TTT ATTAC TAAAGATAAGCAGTA TERM 278 350159 - 350144 - g 93 -4.8 -5.9218 | TATAGAAGAAAAAAA TAAATC TGAT GATTTA GATAATTATATGAAT A1E_01570 349815 - 350318 + | putative monovalent cation/H+ antiporter subunit B prfB 351496 - 350444 - | peptide chain release factor 2 TERM 279 353041 - 353029 - g 72 -3.4 -5.31456 | CTAATTTACAAAAAA TCGA GTCAA TCGA AGAGCCATGGATTAA A1E_01580 351834 - 353636 + | GTP-binding protein LepA A1E_01585 354301 - 354540 + | hypothetical protein TERM 280 355738 - 355723 - T 70 -4.8 -4.63218 | opp_overlap 355714 TTTTGGTTAATAAAA TTAATG TAAT CATTAA AATTAGTTGGAGTAA TERM 281 356049 - 356063 + T 75 -8.6 -3.47975 | opp_overlap 356048, overlap 356047 GTGGTAATAATGCAG TGGGTT TTT AACCCA TATTATCTTCTATCC A1E_01590 357040 - 356372 - | hypothetical protein TERM 282 356655 - 356667 + g 74 -6.3 -4.36914 | opp_overlap 356655 GATAAATCAGGTAAA GCAAA ATT TTTGC TTTTATCAAACGAGG A1E_01595 358304 - 357249 - | hypothetical protein TERM 283 358233 - 358209 - G 71 -6.6 -4.06505 | GTAAGATATTATAAA TGCAATAAAA AATGG TTTTACTGCA TCTGAAATTAGCATA A1E_01600 358845 - 358306 - | hypothetical protein TERM 284 358790 - 358800 + g 85 -6.8 -5.08731 | TCCTCTCTATCGTTA GCAC TTG GTGC TTTTCTTATTTCTTC A1E_01605 358922 - 359641 + | ribonuclease PH rph 360130 - 360339 + | ribonuclease PH TERM 285 360351 - 360365 + F 85 -7.2 -4.91109 | CTAATATGTTTGTCT TTAAGC TAA GCTTAA TTTTTATAATAAAAA TERM 286 361211 - 361181 - f 71 -2.7 -5.45652 | AGGTCTAATAAAAAA TTTTTGTTCTTTC CCCTT GAACTAACAAAAA TAAAATATATATAGT groES 361264 - 361551 + | co-chaperonin GroES TERM 287 362076 - 362065 - g 73 -4.4 -5.03747 | AAATCGGCGAAAAAA TTGC TAAG GCAA TGGAGGAAGTCGGTA TERM 288 362586 - 362567 - g 72 -5 -4.87803 | CATTTCCAAAGAAAA TACCGTAA TTGT TGACGGTA GTGGTGATAAGAAAA A1E_01620 361581 - 363224 + | chaperonin GroEL A1E_01625 363625 - 364005 + | hypothetical protein TERM 289 364667 - 364681 + T 75 -7.2 -4.11216 | CTGTATTACTTTGTT GAAACT TAC AGTTTC TTTTCGCAATGACGA groEL 365274 - 364741 - | chaperonin GroEL TERM 290 365240 - 365213 - G 72 -3.6 -5.23292 | gap 1, overlap 365216 CTATACAAAACAAAA TTA-CCGGTTATT ATA AATAACCCGCTAA AAACAAAAGCAATTT gltX 366662 - 365271 - | glutamyl-tRNA synthetase TERM 291 366637 - 366621 - G 74 -5.8 -4.71061 | ACCTATATGTAAAAA CCCCGT TGGTG ACGGAG CAAATCTAGTAATTA A1E_01640 367465 - 366755 - | 3-demethylubiquinone-9 3-methyltransferase TERM 292 367414 - 367432 + g 73 -4.6 -5.05301 | opp_overlap 367413 367416, overlap 367416 367417 CCTTATTCCACCAAT TATGAGAA ATT TTCTCAAA TTTTTCTAATTCTTT TERM 293 367741 - 367753 + G 70 -4.1 -5.02074 | overlap 367742 ATTTCAGTGACGGAC TTGCT CAT AGCAG TTTTTTAGCAGCTAG A1E_01645 367641 - 368408 + | 3-demethylubiquinone-9 3-methyltransferase TERM 294 368444 - 368461 + T 74 -9.1 -2.8372 | overlap 368443 ATGTTCAGGATGTCA TTCCCGC GTAG GCGGGGA ATTTAGTAAACCATA TERM 295 368472 - 368497 + T 70 -7.8 -3.35934 | opp_overlap 368472 GGGGAATTTAGTAAA CCATATAAAA ACCTTG TTTTATATGG TTATCAAGTATGTAC TERM 296 368497 - 368472 - T 73 -7.8 -3.794 | opp_overlap 368472 GGGGAATTTAGTAAA CCATATAAAA ACCTTG TTTTATATGG TTATCAAGTATGTAC A1E_01650 372380 - 368952 - | acylglycerophosphoethanolamine acyltransferase TERM 297 370591 - 370575 - G 77 -8.1 -3.82218 | opp_overlap 370584 ATTCATATTAGCAAA TTTTACC GGC GGTAAAA CCGTTATAGTAATTT TERM 298 371825 - 371810 - G 72 -4.7 -4.83169 | ATTTTGGTACAAAAA GGCTT GTAATG AAGCC GAGAAAGGCAATGGT A1E_01655 372565 - 372407 - | hypothetical protein TERM 299 373329 - 373319 - g 71 -8.2 -3.19482 | opp_overlap 373319 373318 373316, overlap 373318 GCATACCACTAAAAG CGGC GTT GCCG ATCTTGCATTTAACA TERM 300 373902 - 373886 - g 80 -9.5 -3.44529 | TTATATAGTAATGAA CTCTAAG CAT CTTAGAG GCGATATAAACTATG TERM 301 374158 - 374147 - g 70 -4.4 -4.7497 | CTTACGTACTAAAAA GGTA GAAT TACC TTGGAAAAAGCATGA A1E_01660 372645 - 374189 + | propionyl-CoA carboxylase beta chain precursor TERM 302 374247 - 374233 - g 100 -7.2 -5.9003 | opp_overlap 374233 AAAGTAATAAAAAAA TGCTAA AAA TTAGCA TTTTAAACTGGATTG TERM 303 374233 - 374247 + G 76 -7.2 -4.15453 | opp_overlap 374233 AAAGTAATAAAAAAA TGCTAA AAA TTAGCA TTTTAAACTGGATTG A1E_01665 374232 - 374357 + | hypothetical protein A1E_01670 374354 - 374755 + | hypothetical protein TERM 304 375767 - 375751 - g 74 -3.8 -5.17744 | AGATAGCAATAAAAA TTTCTA TTTTT TAGAAA TGAATACTAGGTTGC A1E_01675 374891 - 376888 + | acylglycerophosphoethanolamine acyltransferase TERM 305 377606 - 377594 - T 70 -7.7 -3.40382 | opp_overlap 377594 377591 377589 CATGAAATGTGATAA CCATG GTT CATGG TAATATATTGGTTAC TERM 306 378051 - 378067 + T 75 -5.9 -4.74767 | opp_overlap 378046 CAATAAAATACTTTA CTAAAGT TAA ACTTTGG TTTTGTATTGCTTGT A1E_01680 378203 - 378084 - | hypothetical protein TERM 307 378109 - 378126 + g 82 -2.7 -5.97575 | opp_overlap 378109, overlap 378112 GTTAGTGCAATTAAA TCATCAG TTTG CTGATAA TTTTTTTTCTGAATT A1E_01685 381698 - 378459 - | isoleucyl-tRNA synthetase TERM 308 381579 - 381593 + g 74 -5.8 -4.6644 | TTCGGCATCTTTTAT TCTATT ATC AATAGA TTTTTGGAATATATT ileS 382779 - 382168 - | isoleucyl-tRNA synthetase TERM 309 382213 - 382232 + g 78 -5.8 -4.91573 | overlap 382214 TGAAGGGTCGAGTAG TTTTCTCA TCTG TGAGAAAG TTTTTACTATATTTT A1E_01695 382865 - 383065 + | 30S ribosomal protein S21 TERM 310 383096 - 383119 + T 100 -9 -5.60689 | opp_overlap 383096 TAATACTAAATTAAA GCTAGAAATA TTAA TGTTTCTAGC TTTTTTGTTATGTAG TERM 311 383119 - 383096 - T 72 -6.8 -4.14345 | opp_overlap 383096 TAATACTAAATTAAA GCTAGAAATA TTAA TGTTTCTAGC TTTTTTGTTATGTAG A1E_01700 383350 - 383216 - | hypothetical protein A1E_01705 383944 - 385746 + | nitrogen regulation protein ntrY TERM 312 386019 - 386042 + F 76 -9 -3.14132 | opp_overlap 386019, overlap 386023 TGCAAGTCGAACGGA CTAATTAGGG CTTG CTCTAATTAG TTAGTGGCAGACGGG TERM 313 386739 - 386755 + F 70 -8.7 -2.73124 | opp_overlap 386738, overlap 386738 ATGAGTGCTAGATAT CGGGAGA ATA TCTCTCG GTTTCGCAGCTAACG TERM 314 387432 - 387413 - f 73 -9.2 -2.65808 | opp_overlap 387413 387409, overlap 387410 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTA TERM 315 387413 - 387432 + F 87 -11.4 -2.5602 | opp_overlap 387410 387413, overlap 387409 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATTACCTCCTTA A1E_01710 388111 - 388425 + | hypothetical protein A1E_01715 388422 - 388532 + | hypothetical protein A1E_01720 388589 - 388687 + | hypothetical protein A1E_01725 389243 - 389380 + | hypothetical protein TERM 316 389592 - 389565 - g 71 -2.1 -5.38326 | gap 1 TTAAGGAAATAAAAA CCT-TAGCTGAA TTACC TTCAGGTACAGG TCATGAATATTTTAT TERM 317 390983 - 390995 + G 79 -3.4 -5.60864 | opp_overlap 390983 AATACTAAAGAAGTA GAGT TTTGT ACTC TTTTTTTGATATATA rpsU 389492 - 391237 + | 30S ribosomal protein S21 rnpA 391662 - 391306 - | ribonuclease P A1E_01740 391816 - 391682 - | 50S ribosomal protein L34 rplT 392301 - 391948 - | 50S ribosomal protein L20 A1E_01750 392523 - 392317 - | 50S ribosomal protein L35 rpmI 392810 - 393487 + | 50S ribosomal protein L35 A1E_01760 393570 - 394184 + | 50S ribosomal protein L25/general stress protein Ctc TERM 318 394269 - 394289 + F 77 -9.7 -2.79743 | overlap 394266 394265 TTTAAAATTTTTAGA TCCCGTGAT CAC GTCACGGGG TGGTATCTGTTTCTG A1E_01765 394400 - 394957 + | peptidyl-tRNA hydrolase TERM 319 395060 - 395045 - f 70 -4.8 -4.7497 | opp_overlap 395045, overlap 395055 GGTATCCAGTAAAAA TACTAA ATTA TTAGTA TTCTAAGCTGTGTGT A1E_01770 395240 - 395416 + | peptidyl-tRNA hydrolase TERM 320 395597 - 395627 + G 77 -7.6 -4.06533 | opp_overlap 395597 395626, overlap 395626 ACTAAAATTAGGAAT TGTGGGGTTACCGA ATG TCGGTAAGTCAACA TTATTTAATGCTTTA TERM 321 396450 - 396463 + G 71 -6.7 -4.07568 | opp_overlap 396450 ATAGGTCCTAAAGAA GTCCA TAGT TGGAC TTTTAAAGACGGCAC A1E_01775 395577 - 396674 + | translation-associated GTPase A1E_01780 396688 - 396903 + | hypothetical protein TERM 322 397609 - 397626 + G 74 -6.3 -4.48317 | overlap 397605 ATTAAGCAAATTCCG GCATGGA TTCT TCTATGC TTATTTATTTTATCC TERM 323 398270 - 398284 + G 72 -3.6 -5.1356 | opp_overlap 398275, overlap 398260 ATTATGGTTTTTATA TAGAAG CCC CTTTTA TTTTTATTGATAAAA A1E_01785 397585 - 398814 + | hypothetical protein A1E_01790 399293 - 399150 - | hypothetical protein A1E_01795 399518 - 399405 - | hypothetical protein A1E_01800 400150 - 399878 - | hypothetical protein A1E_01805 400316 - 400155 - | hypothetical protein A1E_01810 400533 - 400327 - | hypothetical protein TERM 324 400634 - 400644 + r 71 -2.6 -5.45652 | opp_overlap 400634, overlap 400623 CTAGTTGATTATTAA TTAA TTC TTAA TTTTTTATTGCACGT A1E_01815 402545 - 400704 - | hypothetical protein A1E_01820 403941 - 403657 - | hypothetical protein A1E_01825 405441 - 404050 - | chromosomal replication initiation protein A1E_01830 405798 - 405472 - | hypothetical protein TERM 325 406157 - 406143 - g 71 -2.2 -5.41941 | TAAATTAAATAAAAA TTCTTT ACA AAAAAA ACTTCTTTATCTTAG A1E_01835 406123 - 406386 + | hypothetical protein TERM 326 407833 - 407809 - g 70 -7.3 -3.71378 | CATGGGATAGGTAAA TTTTTAAAGCT GGA AGCTTTAGAAA TTAAAGGAAAACTGC TERM 327 408296 - 408313 + G 80 -7.1 -4.57353 | CACCTCAAGTAGCCG TAGTTGT ACCG ACAACTA TTTTATGTAGTCAAC TERM 328 409304 - 409323 + G 80 -7.9 -4.17958 | opp_overlap 409304 409303 409297 TTTTTAAAGATGAAC CGGTTGT CTCAGA ACAACCG TTTATTCCGACTATT A1E_01840 406399 - 409758 + | hypothetical protein TERM 329 409844 - 409799 - f 100 -13.5 -3.16564 | opp_overlap 409801, overlap 409801 TCTCTACTGTATGAA CATTTAGGATGTCATTCCTGC TTTC GCAGGAATGACATCGAAAATT ATAAAACGGCATTTA TERM 330 409801 - 409842 + F 100 -16.1 -3.29043 | opp_overlap 409799 409801 TCTACTGTATGAACA TTTAGGATGTCATTCCTGC TTTC GCAGGAATGACATCGAAAA TTATAAAACGGCATT TERM 331 409842 - 409801 - f 100 -16.1 -3.14602 | opp_overlap 409801, overlap 409799 TCTACTGTATGAACA TTTAGGATGTCATTCCTGC TTTC GCAGGAATGACATCGAAAA TTATAAAACGGCATT A1E_01845 409875 - 411311 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 332 411322 - 411359 + F 86 -9.5 -3.84808 | opp_overlap 411324 411332, overlap 411325 411326 411332 CTTGATCACGTGAAT CAGCTTAAAATACTAAT AATT ATTAGTATTTTAAATTG TTGTTCTGGATTCCA TERM 333 411325 - 411356 + F 75 -7.6 -4.04491 | opp_overlap 411324 411332, overlap 411322 411326 411332 GATCACGTGAATCAG CTTAAAATACTAAT AATT ATTAGTATTTTAAA TTGTTGTTCTGGATT TERM 334 411326 - 411355 + F 88 -11.1 -3.0161 | opp_overlap 411324 411332, overlap 411325 411322 411332 ATCACGTGAATCAGC TTAAAATACTAAT AATT ATTAGTATTTTAA ATTGTTGTTCTGGAT TERM 335 411332 - 411349 + F 70 -5.7 -4.38637 | opp_overlap 411324 411332, overlap 411326 411325 411322 TGAATCAGCTTAAAA TACTAAT AATT ATTAGTA TTTTAAATTGTTGTT A1E_01850 411460 - 412968 + | hypothetical protein A1E_01855 413061 - 414146 + | phospho-N-acetylmuramoyl-pentapeptide-transferase A1E_01860 414312 - 415991 + | Actin polymerization protein RickA TERM 336 416035 - 416062 + T 87 -11.4 -2.63913 | opp_overlap 416058, overlap 416058 GTGTTGCATGCTTTC TATCATTCCTGC TTCC GCAGGAATGACA TAGTATGCCATACTG A1E_01865 416677 - 416516 - | hypothetical protein A1E_01870 416924 - 416760 - | succinyl-CoA:3-ketoacid-coenzyme A transferase A1E_01875 417243 - 417034 - | succinyl-CoA:3-ketoacid-coenzyme A transferase A1E_01880 418000 - 418290 + | hypothetical protein A1E_01885 418398 - 418607 + | hypothetical protein A1E_01890 418671 - 420788 + | ATP-dependent DNA helicase RecG TERM 337 420911 - 420875 - T 86 -6.2 -5.31456 | opp_overlap 420878 420909, overlap 420878 GTAATCCATAAAAAA TAATAAAAAAATTCTG ATTTA CAAAATTTTTTTATTG GCTTGCTTAGTCAAT TERM 338 420908 - 420878 - T 83 -7.9 -4.73105 | opp_overlap 420878, overlap 420875 ATCCATAAAAAATAA TAAAAAAATTCTG ATTTA CAAAATTTTTTTA TTGGCTTGCTTAGTC A1E_01895 421248 - 421027 - | hypothetical protein A1E_01900 422414 - 421668 - | hypothetical protein A1E_01905 423916 - 422411 - | virulence factor mviN A1E_01910 423983 - 424096 + | hypothetical protein A1E_01915 424722 - 424195 - | inorganic pyrophosphatase A1E_01920 425359 - 424973 - | cytochrome c-type biogenesis protein CcmE A1E_01925 426078 - 425461 - | Sco2 protein precursor A1E_01930 427646 - 426084 - | preprotein translocase subunit SecD A1E_01935 428067 - 427630 - | preprotein translocase subunit YajC TERM 339 428513 - 428488 - R 95 -10.7 -3.99985 | opp_overlap 428488 TACATATTTAAATAA GCATATAAAAA TTGT TTTTTATATGC TTTACTGGATTTTTA TERM 340 428488 - 428513 + r 93 -10.7 -3.85891 | opp_overlap 428488 TACATATTTAAATAA GCATATAAAAA TTGT TTTTTATATGC TTTACTGGATTTTTA TERM 341 428698 - 428715 + r 72 -3.5 -5.22312 | opp_overlap 428691 GATCCAAATTAATTA CATTAAA CTGC TTTAGTG TTTTTTAATCTAAGT TERM 342 428881 - 428892 + r 71 -4.4 -4.8667 | opp_overlap 428881 ATCAATAAAACAACA GCAA TAGT TTGC TTTTTATACACTGTG TERM 343 429538 - 429507 - R 83 -8.4 -4.46615 | gap 1, opp_overlap 429513, overlap 429512 429513 TAGCAGCAACCAAAA GAAAATTTATTAAAG TCT CTTTAATA-ATTTTC TAGCCTTTTTAGGTG TERM 344 429534 - 429512 - R 74 -5 -5.18643 | opp_overlap 429513, overlap 429507 429513 GCAACCAAAAGAAAA TTTATTAAAG TCT CTTTAATAAT TTTCTAGCCTTTTTA TERM 345 429533 - 429513 - R 76 -8.5 -3.69559 | opp_overlap 429513, overlap 429512 429507 CAACCAAAAGAAAAT TTATTAAAG TCT CTTTAATAA TTTTCTAGCCTTTTT TERM 346 429513 - 429533 + r 83 -8.5 -4.47485 | opp_overlap 429513 429512 429507 CAACCAAAAGAAAAT TTATTAAAG TCT CTTTAATAA TTTTCTAGCCTTTTT A1E_01940 431999 - 430629 - | magnesium transporter TERM 347 432350 - 432370 + r 72 -6.9 -4.12532 | opp_overlap 432350 ATAATAAATCAATCA CTGTCATCT AAG AGATGAAAG TTTGTCTATAGCGAC A1E_01945 432534 - 432412 - | hypothetical protein A1E_01950 432743 - 432564 - | hypothetical protein A1E_01955 432878 - 433147 + | hypothetical protein A1E_01960 434335 - 433475 - | HAD family hydrolase TERM 348 434308 - 434282 - G 74 -3 -5.37171 | overlap 434284 AAGATCAAATAAAAA CACGTCATAATT ATC AATTATGTCGAA AATATTTTTTAACTT TERM 349 434306 - 434284 - G 80 -7.8 -4.29436 | overlap 434282 GATCAAATAAAAACA CGTCATAATT ATC AATTATGTCG AAAATATTTTTTAAC TERM 350 434677 - 434664 - g 93 -6.7 -5.37171 | AATATTAAATAAAAA CGGTT CAGT AACCG TGTCCGATAACGGGC A1E_01965 434443 - 436869 + | DNA gyrase subunit B TERM 351 437599 - 437629 + G 70 -4.1 -4.93365 | gap 1, opp_overlap 437589, overlap 437588 ATTAATGCAATACTT GCAGCTGTTTTAGC AGAA GGTGAAACA-CTGC TTTTTAATTGTGGCC A1E_01970 437074 - 438333 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase A1E_01975 438501 - 438884 + | DNA-directed RNA polymerase subunit omega TERM 352 439024 - 438996 - g 78 -6.9 -4.5287 | opp_overlap 438991 439022 439023, overlap 438999 439022 TTAAAGGAATTAAAA CAATTTGCTTTAT TGG ATAAAACAAACCG TGCTACTTTTGTAGC TERM 353 439021 - 438999 - g 79 -7.2 -4.34912 | opp_overlap 438991, overlap 438996 AAGGAATTAAAACAA TTTGCTTTAT TGG ATAAAACAAA CCGTGCTACTTTTGT TERM 354 439043 - 439022 - g 72 -5.1 -4.77775 | opp_overlap 439022 439023 439026, overlap 438996 ATTGGATAAAACAAA CCGTGCTAC TTTT GTAGCAAAG CATTTTGCTGCTAAA TERM 355 439026 - 439063 + G 83 -10.7 -3.13899 | opp_overlap 439022, overlap 439022 439023 GATAAAACAAACCGT GCTACTTTTGTAGCAAA GCAT TTTGCTGCTAAAGAAGC TGTTAGTAAAGCCTT A1E_01980 438885 - 439280 + | 4'-phosphopantetheinyl transferase A1E_01985 440373 - 439525 - | protein export protein PrsA precursor A1E_01990 440584 - 443304 + | preprotein translocase subunit SecA A1E_01995 443305 - 443454 + | nucleotidyltransferase/HEPN domain-containing protein A1E_02000 444232 - 444456 + | ankyrin repeat-containing protein A1E_02005 444609 - 444818 + | hypothetical protein A1E_02010 444931 - 445146 + | hypothetical protein A1E_02015 445734 - 445877 + | Type I restriction-modification system, M subunit A1E_02020 445802 - 446044 + | Type I restriction-modification system, M subunit A1E_02025 447103 - 446915 - | hypothetical protein TERM 356 447594 - 447619 + G 89 -11.9 -3.2964 | AATATTTGCAAGTTC TGTCGGAGGTG CTAC CACCTTCGGCA TTATGGAAAAGGTTT A1E_02030 447424 - 448818 + | Sodium/pantothenate symporter A1E_02035 451269 - 449353 - | excinuclease ABC subunit C TERM 357 451286 - 451313 + r 100 -12.8 -3.35696 | opp_overlap 451312, overlap 451281 TGTATGGTTTTCCGA TGTCATTCCCAC GTAG GCGGGAATGACA TTACATTATTTGTCA A1E_02040 451884 - 451351 - | hypothetical protein A1E_02045 452111 - 452001 - | hypothetical protein A1E_02050 453118 - 452588 - | methylated-DNA--protein-cysteine methyltransferase TERM 358 452946 - 452959 + g 71 -3.1 -5.17488 | GGTTTAGTGCGATCT TCAGT AATA GCTGA TTTTGTTTTAATCTT A1E_02055 454545 - 454363 - | Type I site-specific restriction-modification system, R (restriction) subunit A1E_02060 456406 - 456855 + | cell division protein MraZ TERM 359 457000 - 456979 - g 71 -6.6 -4.08058 | opp_overlap 456979 AAGCAATATTAGAAA GCTGTAAC TGTTAT GTCACAGC TTTAGATCGCGACCC A1E_02065 456855 - 457781 + | S-adenosyl-methyltransferase MraW A1E_02070 457784 - 458173 + | cell division protein FtsL TERM 360 459840 - 459815 - g 70 -8.3 -3.1505 | opp_overlap 459815 459814 ATCAGGTTTGATGAA CCAAAGCCTAC TAAA GAAAGCTTTGG CTTTGCAACGGCAAG A1E_02075 458264 - 459949 + | penicillin-binding protein A1E_02080 460379 - 460900 + | hypothetical protein TERM 361 461234 - 461220 - g 70 -4.4 -4.84359 | opp_overlap 461199 TTATCTCCAGAAAAA TTTAAT TAT ATTAAA CAAAAGATTGAAAAA A1E_02085 460890 - 462671 + | penicillin-binding protein A1E_02090 462710 - 462850 + | hypothetical protein A1E_02095 463165 - 463344 + | hypothetical protein A1E_02100 463781 - 464758 + | hypothetical protein A1E_02105 466859 - 465108 - | hypothetical protein TERM 362 465812 - 465858 + g 100 -13.4 -3.65084 | opp_overlap 465808 465822 465827 ATTGTTTAAAATCAT TATTGCTAAAGATAATATTAGC TAT GCTAATATTATCTAAAGTAATA TTTGAACCTTTAGTT TERM 363 465848 - 465822 - G 100 -14 -3.58522 | opp_overlap 465812, overlap 465808 465827 ATCATTATTGCTAAA GATAATATTAGC TAT GCTAATATTATC TAAAGTAATATTTGA TERM 364 465843 - 465827 - G 77 -8.1 -3.82202 | opp_overlap 465812, overlap 465822 465808 TATTGCTAAAGATAA TATTAGC TAT GCTAATA TTATCTAAAGTAATA A1E_02110 468273 - 466846 - | nitrogen assimilation regulatory protein NtrX A1E_02115 468487 - 468753 + | putative monovalent cation/H+ antiporter subunit F A1E_02120 468896 - 470023 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 365 470079 - 470063 - f 91 -3.8 -5.96219 | opp_overlap 470063 470078 TATCCAGAAAAAAAA TACTAA AATTA TTAGTA TTGTAAATAATATAT A1E_02125 470237 - 470419 + | hypothetical protein A1E_02130 470412 - 470531 + | hypothetical protein A1E_02135 470997 - 471071 + | hypothetical protein A1E_02140 471696 - 471911 + | hypothetical protein A1E_02145 471901 - 472050 + | hypothetical protein A1E_02150 472038 - 472241 + | hypothetical protein TERM 366 473424 - 473445 + G 78 -6 -4.75356 | opp_overlap 473424, overlap 473427 473428 GAGTGGTATAATAAA TCCTTTAA AAATTC TTAAAGGA TTTTTAGCTATATTT TERM 367 473445 - 473424 - g 74 -6.7 -4.31433 | opp_overlap 473424 473427 473428 GAGTGGTATAATAAA TCCTTTAAA AATT CTTAAAGGA TTTTTAGCTATATTT A1E_02155 472492 - 473823 + | proline/betaine transporter A1E_02160 474467 - 473820 - | hypothetical protein A1E_02165 474647 - 474576 - | hypothetical protein TERM 368 474676 - 474664 - R 74 -4.9 -5.0666 | TAGTGAAAAAAGAAA TAACA AAA TGTTA AAAAACTAGTAAGAA A1E_02170 476395 - 476156 - | hypothetical protein A1E_02175 476994 - 476698 - | hypothetical protein TERM 369 476733 - 476749 + g 74 -2.3 -5.57396 | overlap 476736 CAAGTATTGTTGCCC GAACATT TAT AATGTTG TTTTTTATTACTTCT A1E_02180 477733 - 477912 + | hypothetical protein A1E_02185 477924 - 479159 + | tyrosyl-tRNA synthetase A1E_02190 479982 - 480158 + | hypothetical protein A1E_02195 480266 - 481120 + | tyrosyl-tRNA synthetase TERM 370 481360 - 481377 + F 100 -8.4 -5.56673 | AAAAATTTATAGATG GGTGGG TTTATC CCCACC TTTTTTATTATAAAT A1E_02200 481400 - 481777 + | hypothetical protein TERM 371 481886 - 481875 - f 73 -4.4 -5.18561 | GAAATATTTAAAAAA TTGC TAAA GCAA TAAGAGATGATTTAT nusA 481900 - 483411 + | transcription elongation factor NusA TERM 372 483492 - 483464 - f 77 -6.2 -4.80178 | opp_overlap 483466, overlap 483466 CAGGAAGTAAGAAAA CACCTATAAAAA CTTGT TTTTTATAGGTT TGTTTTATCAAGTAT TERM 373 483466 - 483490 + F 90 -8.8 -4.77775 | opp_overlap 483464 483466 GGAAGTAAGAAAACA CCTATAAAAA CTTGT TTTTTATAGG TTTGTTTTATCAAGT TERM 374 483490 - 483466 - f 80 -8.8 -4.00694 | opp_overlap 483466, overlap 483464 GGAAGTAAGAAAACA CCTATAAAAA CTTGT TTTTTATAGG TTTGTTTTATCAAGT TERM 375 483775 - 483789 + G 71 -8.6 -2.95652 | overlap 483774 AGAAAAAGCTCTATC GGTAGT ACT ACTACC ATTTCATTAAATAAA TERM 376 485521 - 485543 + G 74 -8.6 -3.20494 | opp_overlap 485521 485524, overlap 485519 AGTAAAATTAAGGAA TTACCTTTAA TTA TTAAAGGTGA TGTTCATGGTTCAGT A1E_02210 483625 - 486126 + | translation initiation factor IF-2 A1E_02215 486434 - 488014 + | hypothetical protein TERM 377 488023 - 488048 + T 100 -12.1 -5.19916 | opp_overlap 488023 ACTCTAAATAAAAAA GGATAAGATTT AAGA AAATCTTATCC TTTTTTAGCTATTTT TERM 378 488048 - 488023 - T 100 -12.1 -5.64421 | opp_overlap 488023 ACTCTAAATAAAAAA GGATAAGATTT AAGA AAATCTTATCC TTTTTTAGCTATTTT infB 488723 - 488043 - | translation initiation factor IF-2 TERM 379 488527 - 488512 - G 74 -9 -3.07236 | overlap 488520 488521 AAACCTATTCTAATA CCGGTA AAGC TACCGG GACCGGTAGTGACCG TERM 380 488536 - 488521 - G 72 -9 -2.76315 | overlap 488512 488520 CTAATACCGGTAAAG CTACCG GGAC CGGTAG TGACCGCTAAATAAT A1E_02225 489531 - 488806 - | DNA repair protein RecO recO 490062 - 489730 - | DNA repair protein RecO A1E_02235 491399 - 490059 - | DNA repair protein RadA TERM 381 490187 - 490198 + g 86 -5.8 -5.38549 | CTTTTACTCTCATTT CTGC TTTT GCAG TTTTTCTTATTTCAC A1E_02240 492110 - 491538 - | N6-adenine-specific methylase A1E_02245 494989 - 492119 - | hypothetical protein TERM 382 495019 - 495042 + r 70 -4.8 -4.69464 | opp_overlap 495019 TTCGTTAAAACATAT TAATTAGTAA CACA TTATTAATTA TTTTTCCAGTATTTT A1E_02250 495729 - 495040 - | repair protein A1E_02255 495922 - 496068 + | hypothetical protein A1E_02260 496497 - 496643 + | hypothetical protein A1E_02265 498227 - 496743 - | replicative DNA helicase TERM 383 498698 - 498708 + rH 71 -4 -5.06816 | opp_overlap 498705, overlap 498705 AGTACCGTTGTCATT TTAG TAA CTAA TTTTTATTAAACACT A1E_02270 499350 - 498715 - | aromatic acid decarboxylase TERM 384 500357 - 500347 - gR 70 -5.4 -4.49939 | ATAGAAGCTATAAAA GCTA ATT TAGC TAATAAAAAGCAAAC A1E_02275 499345 - 501291 + | primosome assembly protein PriA TERM 385 501628 - 501640 + Tr 74 -4.9 -5.03145 | CAATAATCTTTGATA TCAAT ATG ATTGA TTTTTTAAAAAATTC A1E_02280 501903 - 501787 - | hypothetical protein A1E_02285 502061 - 503053 + | delta-aminolevulinic acid dehydratase TERM 386 503316 - 503303 - g 77 -3.1 -5.67063 | GCGATGATAAAAAAA GAGAC TTCA ATCTC AAAAAATATAGCCGA TERM 387 503538 - 503517 - g 83 -10.3 -3.29263 | opp_overlap 503522, overlap 503522 ATATGTCTGCTACAA CTAAACCAA GTTC TTGGTTTAG AAAAGACGGTGGTAG A1E_02290 503168 - 504733 + | delta-aminolevulinic acid dehydratase A1E_02295 506093 - 504723 - | NADH dehydrogenase subunit N TERM 388 504947 - 504935 - G 82 -6.3 -5.00616 | overlap 504943 TTGCTTGGTAAAAAA GGTAA TAT TTACC GAAAAATCCTGTAAG TERM 389 505997 - 506010 + g 77 -3.9 -5.35815 | opp_overlap 505988 505994, overlap 505994 ATAAAATAATTATAT TAGAA ATAA TTCTA TTTTTATTTGGTATC TERM 390 506056 - 506040 - G 77 -4.3 -5.23316 | opp_overlap 506041 506042, overlap 506032 506041 506042 CATTACAGCAAAAAA CTGCCCT AAA AGGGCTA TTATAATTAAAGTTA TERM 391 506054 - 506042 - G 73 -9.1 -2.82658 | opp_overlap 506042 506041, overlap 506032 506041 506040 TTACAGCAAAAAACT GCCCT AAA AGGGC TATTATAATTAAAGT TERM 392 506042 - 506054 + g 77 -9.1 -3.33214 | opp_overlap 506032 506041 506040 506042, overlap 506041 TTACAGCAAAAAACT GCCCT AAA AGGGC TATTATAATTAAAGT A1E_02300 506111 - 506275 + | hypothetical protein A1E_02305 506505 - 506684 + | transposase A1E_02310 507004 - 507237 + | hypothetical protein A1E_02315 507267 - 507389 + | hypothetical protein TERM 393 507451 - 507431 - f 72 -6.9 -4.12532 | opp_overlap 507431 GTCGCTATAGACAAA CTTTCATCT CTT AGATGACAG TGATTGATTCTATGC TERM 394 507532 - 507520 - f 73 -7.7 -3.74198 | AAAAAATACTTGAAA TCCTG AAA CAGGA CAAGAAATTATGGGA A1E_02320 507737 - 508609 + | hypothetical protein TERM 395 508688 - 508720 + F 83 -6.6 -4.89054 | opp_overlap 508688, overlap 508674 TTAAAAAGTAAAAGT TTTTAGTTTTTATT GTAAA AATGAGAACTAAAA TTATTTTTTTATAAA A1E_02325 508865 - 508969 + | hypothetical protein A1E_02330 509686 - 510792 + | hypothetical protein TERM 396 510830 - 510812 - f 76 -9 -3.02511 | opp_overlap 510816, overlap 510816 GTCATTCCTGCAATA GTAACAAT TTG ATTGTTAC CTCAGGTTTGACCAC TERM 397 510884 - 510868 - f 75 -3.7 -5.52347 | opp_overlap 510870, overlap 510870 AATAAAATTAAAAAA GACTGTA TGA TACAGTT GTGAGAGAATTAACT TERM 398 510882 - 510870 - f 72 -6.3 -4.35313 | opp_overlap 510870, overlap 510868 TAAAATTAAAAAAGA CTGTA TGA TACAG TTGTGAGAGAATTAA A1E_02335 510902 - 512134 + | NADH dehydrogenase subunit N A1E_02340 512223 - 512624 + | scaffold protein A1E_02345 512621 - 512953 + | Iron-sulfur cluster assembly accessory protein TERM 399 513222 - 513239 + G 79 -8.5 -3.79482 | TGCTGTCACTATTTG GTGCTAT GAGT ATAGCAC TTGTATTCTCGTGTT A1E_02350 513083 - 514399 + | putrescine-ornithine antiporter TERM 400 514380 - 514414 + F 80 -6.4 -4.84017 | gap 1, opp_overlap 514404, overlap 514382 514383 514405 TTGCAAAGTCCTCAG TGTCACCTCCCGTGA CTTGAA TCACGGGGGGCG-CG TTTTTCTCCCCCCTT TERM 401 514382 - 514413 + F 70 -7.9 -3.49687 | opp_overlap 514404, overlap 514380 514383 514405 GCAAAGTCCTCAGTG TCACCTCCCGTGA CTTGAA TCACGGGGGGCGC GTTTTTCTCCCCCCT TERM 402 514383 - 514412 + F 87 -11.4 -2.6933 | opp_overlap 514404, overlap 514382 514380 514405 CAAAGTCCTCAGTGT CACCTCCCGTGA CTTGAA TCACGGGGGGCG CGTTTTTCTCCCCCC TERM 403 514405 - 514427 + F 73 -7.6 -3.72078 | opp_overlap 514404, overlap 514383 514382 514380 CGTGACTTGAATCAC GGGGGGCG CGTTTTT CTCCCCCC TTAGTTATTTTATGG TERM 404 514803 - 514815 + G 77 -7.7 -4.0174 | opp_overlap 514802 AGACCTACAAAATTC GCTTG TAT CAAGC TTTCTAAATTATGTT TERM 405 515857 - 515847 - g 83 -6.8 -4.93296 | CGATGAGCAGAAAAA GCGT TAT ACGC AAGTACTTAAAGGAC A1E_02355 514480 - 516357 + | hypothetical protein TERM 406 516599 - 516566 - T 76 -8.3 -3.762 | overlap 516571 AAATCAATTCAATAA TTCAATGCAAGAAAG GAAA CTCTCTTGCAATAAA AAGTTCTATAATCCA TERM 407 516594 - 516571 - T 86 -10.4 -3.29861 | overlap 516566 AATTCAATAATTCAA TGCAAGAAAG GAAA CTCTCTTGCA ATAAAAAGTTCTATA A1E_02360 517727 - 516744 - | octaprenyl-diphosphate synthase TERM 408 516802 - 516814 + g 70 -4.1 -4.9448 | TAATCTTTATAAATA TTCTG AAC CGGAA TTTTATTTAATAACT TERM 409 517292 - 517312 + g 75 -9.7 -2.79505 | overlap 517291 GCTGCACTACCTCTC CTTCGGAGA TAA TCGCCGAAG CTTTAGCTAAAATAT A1E_02365 519500 - 517839 - | hypothetical protein TERM 410 519609 - 519579 - R 80 -5.6 -5.18357 | opp_overlap 519563 519587, overlap 519571 519580 519587 CAATCCAGCAAAAAA TTAAAAAATGCTAA TCT TTCGCATTTTTTAC TGGATTGCTTTGTCA TERM 411 519608 - 519580 - R 80 -9.1 -3.6993 | opp_overlap 519563 519587, overlap 519571 519579 519587 AATCCAGCAAAAAAT TAAAAAATGCTAA TCT TTCGCATTTTTTA CTGGATTGCTTTGTC TERM 412 519601 - 519587 - R 74 -2.8 -5.59502 | opp_overlap 519563 519587, overlap 519571 519580 519579 CAAAAAATTAAAAAA TGCTAA TCT TTCGCA TTTTTTACTGGATTG A1E_02370 521171 - 519660 - | ADP,ATP carrier protein TERM 413 520888 - 520869 - G 74 -2.9 -5.40014 | AAATAATAAGAAAAA TAGTAGA AAACTG CCTACTA TAACATAGAAAATAT A1E_02375 521797 - 521420 - | transposase IS200-family protein TERM 414 523213 - 523235 + G 71 -2.1 -5.33405 | opp_overlap 523217, overlap 523217 CAGGCTATATAGTAG TAAATTTTG GTTGG CAAAATTTC TTTTTATTTACTACA TERM 415 523217 - 523231 + G 71 -2.9 -5.12987 | opp_overlap 523217, overlap 523213 CTATATAGTAGTAAA TTTTG GTTGG CAAAA TTTCTTTTTATTTAC A1E_02380 522057 - 523307 + | ampG protein TERM 416 524242 - 524258 + G 81 -2.3 -5.95539 | overlap 524243 524245 CCTTAACTTGCATAC TTATATC TTG GATATGG TTTTTTTCTTTAGCA A1E_02385 523773 - 524414 + | lysine efflux permease TERM 417 524473 - 524453 - g 82 -9.9 -3.20639 | opp_overlap 524453 524452 524458, overlap 524450 524458 TTATTAAAGAAATGA GTAAATCTA ATT TAGATTTAC ATTATATTCATTGTC TERM 418 524453 - 524473 + G 79 -9.9 -2.86218 | opp_overlap 524450 524453 524458, overlap 524452 524458 TTATTAAAGAAATGA GTAAATCTA ATT TAGATTTAC ATTATATTCATTGTC TERM 419 524651 - 524638 - g 81 -3.9 -5.62219 | AACACATCAAAAAAA TTGTT AGAA AACAA AGGTTTAAAAGTAAC A1E_02390 524392 - 525072 + | hypothetical protein TERM 420 525744 - 525722 - g 72 -2.8 -5.35222 | overlap 525724 AAAATTGAGAAAAAA TCTTCTGTTA TGA TAATAAAAGA ACAAGATAAAAATCT TERM 421 525768 - 525757 - g 71 -3 -5.21506 | overlap 525759 AGAACAAGATAAAAA TCTA ATTT TAGA GAAATTAAACTATCT A1E_02395 525059 - 525841 + | hypothetical protein A1E_02400 525834 - 526847 + | hypothetical protein TERM 422 526924 - 526895 - T 70 -5.3 -4.4715 | opp_overlap 526901, overlap 526896 CTGGAATCCAGAAAA CTATAATAAAAAA CTTG TTTTTTATTATAT CAAATAATGTAAATT TERM 423 526923 - 526896 - T 74 -8.8 -3.27808 | opp_overlap 526901, overlap 526895 TGGAATCCAGAAAAC TATAATAAAAAA CTTG TTTTTTATTATA TCAAATAATGTAAAT A1E_02405 527740 - 527021 - | hypothetical protein TERM 424 527098 - 527117 + g 72 -5.8 -4.39696 | GATGATAATTAGATT GGATTGTT ATTA AATAATCC TTTATTGCTTTAGCA A1E_02410 527861 - 528004 + | hypothetical protein TERM 425 528122 - 528147 + T 95 -12.1 -3.8766 | opp_overlap 528118 528129, overlap 528129 TATTTATAGCACCAG TAGCAAATTAC TTTT GTAATTTGCTA TTTACTATGATCTAA A1E_02415 528599 - 528159 - | hypothetical protein A1E_02420 529228 - 528641 - | scaffold protein TERM 426 530006 - 529975 - g 83 -8 -4.287 | AAAGAAATTCTAAAA GTACCTGAACCGCT AATT AATGGCTCAGGCAC AAGGATCATGAGTTT A1E_02425 529456 - 530448 + | tryptophanyl-tRNA synthetase TERM 427 531209 - 531171 - T 100 -20.8 -3.11634 | opp_overlap 531171, overlap 531176 531186 TTCTATATTACCCAA TTTAATGATGCTAAACTA AAT TAGTTTAGCATCATTAAA TTTGAGAAACTGCCC TERM 428 531171 - 531209 + T 100 -20.8 -3.54424 | opp_overlap 531171 531176 531186 TTCTATATTACCCAA TTTAATGATGCTAAACTA AAT TAGTTTAGCATCATTAAA TTTGAGAAACTGCCC TERM 429 531204 - 531176 - T 100 -16.3 -3.19668 | opp_overlap 531171, overlap 531171 531186 TATTACCCAATTTAA TGATGCTAAACTA AAT TAGTTTAGCATCA TTAAATTTGAGAAAC A1E_02430 532101 - 531967 - | hypothetical protein A1E_02435 533103 - 532198 - | porphobilinogen deaminase A1E_02440 533324 - 533100 - | microcin C7 resistance protein TERM 430 533461 - 533479 + r 78 -7.6 -4.4017 | GATTTTATTCTATTT TTGTTTTA TAT TAAAACAA TTTTCTACAAATTCA TERM 431 533540 - 533553 + r 74 -6.7 -4.42806 | ATTATTTTAACCTGT GCCTT TTCC AAGGC TTTCTTTAAAGATGC A1E_02445 533659 - 533531 - | hypothetical protein A1E_02450 533792 - 533637 - | hypothetical protein TERM 432 533938 - 533926 - g 88 -6.3 -5.3321 | opp_overlap 533923 533926 AAGGAAGAATAAAAA TGCTA ATT TAGCA TTGTTTGATTTTTTT TERM 433 533926 - 533938 + G 70 -6.3 -4.32035 | opp_overlap 533926, overlap 533923 AAGGAAGAATAAAAA TGCTA ATT TAGCA TTGTTTGATTTTTTT A1E_02455 533819 - 533959 + | hypothetical protein A1E_02460 534542 - 534261 - | alkaline phosphatase synthesis sensor protein phor (phor) A1E_02465 536452 - 536315 - | hypothetical protein TERM 434 536442 - 536454 + g 89 -7.7 -4.99134 | opp_overlap 536442 536440, overlap 536445 TTTACAATAAAATTA CCATG AAA CATGG TTTTTCATTTACGCT A1E_02470 537344 - 536514 - | glycine cleavage T-protein A1E_02475 537460 - 538251 + | hypothetical protein A1E_02480 538262 - 539116 + | ribonuclease D hemC 539751 - 539212 - | porphobilinogen deaminase TERM 435 539486 - 539467 - G 75 -9.4 -2.82156 | opp_overlap 539466 539465 ACCTAAAGCTAATGA GTCCTTAT AATG ATAAGGAC AATATTGTATCTCAT A1E_02490 541163 - 539784 - | dihydrolipoamide dehydrogenase TERM 436 540192 - 540204 + g 78 -9.1 -3.4314 | overlap 540190 TGCAATAATTTCCAC GGCAG CTA CTGCC TCTTCTTCGGCTTTA TERM 437 540522 - 540532 + g 71 -5.4 -4.55295 | opp_overlap 540522 CTGTAACTTCATAAA TTGC ATA GCAA TTTCTTTATCAAGCA TERM 438 541253 - 541236 - R 100 -6.3 -5.88061 | opp_overlap 541237 AAAAAATTAAAAAAA CTCGATC CTGC GATCAAG TTGCGGATTGATAAA A1E_02495 541895 - 541323 - | biotin synthesis protein BioC A1E_02500 542864 - 542226 - | hypothetical protein A1E_02505 543652 - 542885 - | hypothetical protein TERM 439 544319 - 544272 - R 93 -5.2 -5.7946 | gap 1, opp_overlap 544277, overlap 544276 544277 544279 TTTTTAAGAAAAAAA TAAGCTATCATAACTCCTCTTAT GAA ATCAGACGAGTTATGATAT-TTA AGATGTAAAGACTTA TERM 440 544316 - 544276 - R 76 -8.5 -3.55421 | opp_overlap 544277, overlap 544272 544277 544279 TAAGAAAAAAATAAG CTATCATAACTCCTCTTAT GAA ATCAGACGAGTTATGATAT TTAAGATGTAAAGAC TERM 441 544315 - 544277 - R 93 -12 -2.70812 | opp_overlap 544277, overlap 544276 544272 544279 AAGAAAAAAATAAGC TATCATAACTCCTCTTAT GAA ATCAGACGAGTTATGATA TTTAAGATGTAAAGA TERM 442 544277 - 544315 + r 95 -12 -3.63627 | opp_overlap 544277 544276 544272 544279 AAGAAAAAAATAAGC TATCATAACTCCTCTTAT GAA ATCAGACGAGTTATGATA TTTAAGATGTAAAGA TERM 443 544313 - 544279 - R 80 -10.2 -2.85602 | opp_overlap 544277, overlap 544277 544276 544272 GAAAAAAATAAGCTA TCATAACTCCTCTTAT GAA ATCAGACGAGTTATGA TATTTAAGATGTAAA A1E_02510 545287 - 545051 - | dihydrolipoamide dehydrogenase TERM 444 545344 - 545332 - H 83 -7.7 -4.71061 | opp_overlap 545330 545332 ATTTATATTTAAAAA CCACA AAA TGTGG TATTGTTTTAAAATG TERM 445 545332 - 545344 + H 71 -7.7 -3.69506 | opp_overlap 545332, overlap 545330 ATTTATATTTAAAAA CCACA AAA TGTGG TATTGTTTTAAAATG A1E_02515 545454 - 545579 + | 50S ribosomal protein L36 A1E_02520 545695 - 546453 + | hypothetical protein A1E_02525 546453 - 547199 + | UDP-N-acetylglucosamine pyrophosphorylase A1E_02535 547800 - 547555 - | hypothetical protein TERM 446 548076 - 548065 - H 73 -4.4 -5.1285 | opp_overlap 548065 AAAAAATAAAAGAAA CCTT ATTA AAGG TCTTGTAGTAATTAG A1E_02540 548279 - 548389 + | hypothetical protein TERM 447 548584 - 548599 + T 72 -3.3 -5.24551 | AGATTTGGTAGGTGA TGCTT TTCGGT AAGCA TTTTTATTGCTTTCA A1E_02545 548828 - 548565 - | hypothetical protein TERM 448 549073 - 549052 - H 78 -8.1 -4.01737 | gap 1, opp_overlap 549052, overlap 549053 ATCAAGAACAGTAAA GCCTCCAACA GGC TGTTGGAG-C AATTTCTTGGGGACA TERM 449 549073 - 549053 - H 70 -8.3 -2.99958 | opp_overlap 549052, overlap 549052 TCAAGAACAGTAAAG CCTCCAACA GGC TGTTGGAGC AATTTCTTGGGGACA A1E_02550 549276 - 549383 + | hypothetical protein A1E_02555 550422 - 549394 - | isopentenyl pyrophosphate isomerase A1E_02560 550860 - 550696 - | hypothetical protein A1E_02565 552034 - 551825 - | hypothetical protein clpP 553229 - 552624 - | ATP-dependent Clp protease proteolytic subunit TERM 450 552717 - 552727 + g 71 -3.2 -5.15381 | TGACATGAAATTATC GCGT TCC ATGC TTTTTTCGATATGTT rpsA 555073 - 553367 - | 30S ribosomal protein S1 A1E_02580 555882 - 555226 - | cytidylate kinase TERM 451 555683 - 555701 + g 73 -4.6 -5.1101 | overlap 555685 AAAGCAATTACTGCA TCGATATC AGT GATATCTA TTTTTTGACTAATAC TERM 452 555685 - 555699 + g 76 -7.2 -4.1821 | overlap 555683 AGCAATTACTGCATC GATATC AGT GATATC TATTTTTTGACTAAT TERM 453 556774 - 556752 - g 81 -4.3 -5.35721 | AGATAATAATAAAAA TATATCTAA TAAAT CTAGATATA CTGAATCTACAATTT A1E_02585 556444 - 556833 + | hypothetical protein TERM 454 557083 - 557062 - f 80 -5.3 -5.28983 | overlap 557054 TTCAAAAGACAAAAA TTAATAGAT TTTT ATCCATTAA GTCGTCAATAAGATG A1E_02590 557416 - 557580 + | hypothetical protein A1E_02595 557495 - 557692 + | hypothetical protein A1E_02600 557898 - 558209 + | integrase catalytic subunit A1E_02605 558971 - 559678 + | hypothetical protein A1E_02610 560798 - 559707 - | hypothetical protein A1E_02615 562115 - 560805 - | proline/betaine transporter A1E_02620 562435 - 562214 - | conjugal transfer protein TraD TERM 455 562807 - 562822 + H 89 -6.2 -5.4387 | opp_overlap 562807 TGTTAACGCAGCATA TAAACC TAAA GGTTTA TTTTTTGCTTTCTGT TERM 456 563129 - 563107 - g 72 -4.8 -4.81551 | overlap 563108 CATGTAGATCAAAAA TTCAAAGCCC AAA GGGTTTTGAT GAATAAAGTAGAACG TERM 457 563128 - 563108 - g 73 -8.3 -3.48208 | overlap 563107 ATGTAGATCAAAAAT TCAAAGCCC AAA GGGTTTTGA TGAATAAAGTAGAAC A1E_02625 563083 - 563202 + | conjugal transfer protein TraA A1E_02630 563202 - 563384 + | conjugal transfer protein TraA A1E_02635 563521 - 563775 + | conjugal transfer protein TraA TERM 458 564197 - 564182 - g 70 -6.2 -4.258 | TGAGCTACCAAGAAA TACTAC GCTA GTAGTA GATGAAGCAGGGATG A1E_02640 564150 - 564296 + | conjugal transfer protein TraA A1E_02645 564286 - 564438 + | hypothetical protein A1E_02650 564556 - 564789 + | conjugal transfer protein TraA TERM 459 565046 - 565029 - f 76 -7.1 -4.30978 | CGCAACTTAGCAAAA TAGATAG TAGG CTATCTA GCATTAATTTTAAAA A1E_02655 565561 - 566427 + | conjugal transfer protein TraA A1E_02660 566539 - 566393 - | putative conjugative transfer protein TraD A1E_02665 566956 - 566600 - | putative conjugative transfer protein TraD A1E_02670 567324 - 567115 - | TPR repeat-containing protein A1E_02675 567593 - 567420 - | TPR repeat-containing protein A1E_02680 567809 - 567678 - | hypothetical protein A1E_02685 568881 - 568354 - | conjugative transfer protein TraG TERM 460 569174 - 569231 + r 100 -15.6 -3.35813 | gap 2, opp_overlap 569189 569191 569194, overlap 569194 CCTTTCACATATTTT GTTATAGTCATC-A-TATACAATAAGTA TTCT TACTTATTGTATACTGGATGACTATGAC TTGATTAAACTAAAG TERM 461 569214 - 569189 - R 86 -10.7 -2.82015 | opp_overlap 569174 569194, overlap 569191 569194 GTTATAGTCATCATA TACAATAAGTA TTCT TACTTATTGTA TACTGGATGACTATG TERM 462 569212 - 569191 - R 74 -8.9 -2.95774 | opp_overlap 569174 569194, overlap 569189 569194 TATAGTCATCATATA CAATAAGTA TTCT TACTTATTG TATACTGGATGACTA TERM 463 569519 - 569536 + r 86 -9.9 -3.6052 | GAGACCTGATGCTTT GGCTTTG ACAA CAAAGCC TTCTCATTAGTTTTG A1E_02690 569855 - 569712 - | hypothetical protein A1E_02695 570942 - 570724 - | hypothetical protein TERM 464 570963 - 570999 + H 93 -11.3 -3.2614 | opp_overlap 570968 570971, overlap 570958 570971 AAAATAAGTTTTATT TATAATAATTAATACTA CAG TAGTATTAATTATTAAA TTAATCTAAGAGGTA TERM 465 570994 - 570968 - H 93 -11.2 -3.36175 | opp_overlap 570958 570963 570971, overlap 570971 AAGTTTTATTTATAA TAATTAATACTA CAG TAGTATTAATTA TTAAATTAATCTAAG TERM 466 570991 - 570971 - H 78 -8.5 -3.8211 | opp_overlap 570963 570971, overlap 570968 TTTTATTTATAATAA TTAATACTA CAG TAGTATTAA TTATTAAATTAATCT TERM 467 570971 - 570991 + H 78 -8.5 -3.74928 | opp_overlap 570971 570968, overlap 570963 TTTTATTTATAATAA TTAATACTA CAG TAGTATTAA TTATTAAATTAATCT TERM 468 571103 - 571120 + G 82 -8.5 -4.12133 | ATTACTTAACTTTTA CAGTAAG ATAT CTTACTG TTCTTTAATATTTAC A1E_02700 571020 - 571616 + | hypothetical protein A1E_02705 572290 - 571895 - | hypothetical protein TERM 469 573791 - 573804 + r 80 -5.3 -5.36364 | AAATCTTTTAAAAGT GCTAT TAAA ATAGC TTTTTATATTTTTGC A1E_02710 574039 - 573827 - | putative conjugative transfer protein TraD A1E_02715 574595 - 574374 - | F pilus assembly protein TraB A1E_02720 575180 - 574965 - | hypothetical protein TERM 470 575413 - 575426 + r 81 -3.1 -5.83822 | opp_overlap 575394, overlap 575414 CCTCTACGTAGAGGT TGATC ATTA GATCG TTTTTTTTAAATATC A1E_02725 575892 - 575746 - | hypothetical protein cmk 576809 - 575892 - | cytidylate kinase A1E_02735 578430 - 577054 - | transcription termination factor Rho TERM 471 578628 - 578656 + r 75 -7 -4.21827 | opp_overlap 578651 TAAAAACTCCTATTT GATTTAGTTTTT TTAAC AAAAATTAAATC TTTTAGAATGTTTAC TERM 472 578864 - 578812 - R 100 -15.4 -3.99898 | gap 2, opp_overlap 578826 TAAGTAATTGACAAA GCAATCCAGTA-T-AAGCAATACTGA AAA TCAGTATTGCTTTATTATTGGATTGC AACACGTTGCCTATG TERM 473 578826 - 578848 + r 100 -13.6 -4.4846 | opp_overlap 578812 AGCAATCCAGTATAA GCAATACTGA AAA TCAGTATTGC TTTATTATTGGATTG A1E_02740 580268 - 578946 - | putative methyltransferase rho 582035 - 580278 - | transcription termination factor Rho TERM 474 580353 - 580365 + g 82 -4.9 -5.37593 | overlap 580360 TGTTCTTAACGTTCC TATTG CGG CAATA TTTTTTGCTTTAGGA TERM 475 581180 - 581161 - G 75 -5 -5.10933 | opp_overlap 581161 581159 GGACCTAAAATAAAA CCTAAATG ATAA CATTTCGG TATTTCATTAAGCCC TERM 476 582112 - 582092 - R 71 -2.5 -5.55769 | opp_overlap 582095, overlap 582094 582095 TTTGATAATAAAAAA CATCTAGGT GTC ACCTAGTTC GCTTGACCACGGTGG TERM 477 582095 - 582109 + r 74 -8.6 -3.17075 | opp_overlap 582094 582092 582095 GATAATAAAAAACAT CTAGGT GTC ACCTAG TTCGCTTGACCACGG TERM 478 582109 - 582095 - R 74 -8.6 -3.23281 | opp_overlap 582095, overlap 582094 582092 GATAATAAAAAACAT CTAGGT GTC ACCTAG TTCGCTTGACCACGG prfA 583279 - 582212 - | peptide chain release factor 1 TERM 479 582897 - 582913 + g 77 -8 -3.79113 | opp_overlap 582896 ATATTAAAAAGTATG GCAGCA AAAAG TGCTGC TTCTTCTCCGCCGCT A1E_02755 584818 - 583562 - | branched-chain alpha-keto acid dehydrogenase subunit E2 A1E_02760 585500 - 585057 - | translation initiation factor IF-3 A1E_02765 586010 - 585675 - | hypothetical protein A1E_02770 586170 - 585997 - | hypothetical protein A1E_02775 586615 - 586361 - | hypothetical protein A1E_02780 587097 - 586909 - | hypothetical protein A1E_02785 587960 - 587181 - | biotin--protein ligase A1E_02805 589016 - 589189 + | hypothetical protein A1E_02815 590514 - 589885 - | superoxide dismutase A1E_02820 591909 - 590605 - | folylpolyglutamate synthase A1E_02825 592471 - 591911 - | BioY family protein TERM 480 592204 - 592182 - G 74 -4.1 -5.31059 | overlap 592193 ACAGCAAGTAAAAAA CCTACTAGA TATCC TCCGGTAGG ACCAAATAATGTTTG TERM 481 592351 - 592330 - G 70 -8.1 -3.14527 | overlap 592328 TAAGTCCGATGAACA TCACTGCAA CGGT TTGCAATGA AATAAATATAGGCTT A1E_02830 592724 - 593053 + | hypothetical protein A1E_02835 593121 - 593249 + | hypothetical protein infC 593936 - 593268 - | translation initiation factor IF-3 TERM 482 593960 - 593994 + H 89 -10 -3.8046 | overlap 593963 TGTCATAGTAAGTTC GTTGTTATCCTGTGGT TTG ACCCCGGGATGACTAC TTTAGGATTTTTAAG TERM 483 593963 - 593991 + H 84 -10.3 -2.97543 | overlap 593960 CATAGTAAGTTCGTT GTTATCCTGTGGT TTG ACCCCGGGATGAC TACTTTAGGATTTTT TERM 484 594211 - 594229 + H 75 -7.4 -4.14392 | overlap 594210 TGTTACCAACTTACC GGTACGCT CTT ACCGTACC TTTTCACCCTTACCG TERM 485 595476 - 595487 + G 70 -4.4 -4.75372 | opp_overlap 595476 ACAGGAGAAAAAAAG CTCT TTGG AGAG TTTTTGATAAATGCT TERM 486 595725 - 595714 - g 72 -5.8 -4.42748 | opp_overlap 595714 595713 GTACCGCAAAAAGAA CAGC CATT GCTG CTATTAATATTGCTG TERM 487 596411 - 596395 - g 76 -3.7 -5.35224 | opp_overlap 596394, overlap 596397 TTGATAAAAATAAAA TTCCTTT AGT AAGGGAA ATGATTATTGCTCCC A1E_02845 594669 - 597305 + | pyruvate phosphate dikinase TERM 488 597345 - 597310 - T 100 -13.6 -4.17958 | opp_overlap 597310 597313 597316, overlap 597311 597313 AACATGGGTAATAAA GTATAATACAGGAATC TAAA GATTCCTGTATTATAA TATTAACTCTTCAAA TERM 489 597310 - 597345 + T 100 -13.6 -3.15503 | opp_overlap 597310 597311 597313, overlap 597313 597316 AACATGGGTAATAAA GTATAATACAGGAATC TAAA GATTCCTGTATTATAA TATTAACTCTTCAAA TERM 490 597344 - 597311 - T 100 -17.1 -3.10052 | opp_overlap 597310 597313 597316, overlap 597310 597313 ACATGGGTAATAAAG TATAATACAGGAATC TAAA GATTCCTGTATTATA ATATTAACTCTTCAA TERM 491 597342 - 597313 - T 100 -15.3 -3.10512 | opp_overlap 597310 597313 597316, overlap 597311 597310 ATGGGTAATAAAGTA TAATACAGGAATC TAAA GATTCCTGTATTA TAATATTAACTCTTC TERM 492 597313 - 597342 + T 100 -15.3 -2.77678 | opp_overlap 597313 597311 597310, overlap 597310 597316 ATGGGTAATAAAGTA TAATACAGGAATC TAAA GATTCCTGTATTA TAATATTAACTCTTC TERM 493 597316 - 597339 + T 100 -12.6 -3.52787 | opp_overlap 597313 597311 597310, overlap 597313 597310 GGTAATAAAGTATAA TACAGGAATC TAAA GATTCCTGTA TTATAATATTAACTC A1E_02850 597814 - 597692 - | hypothetical protein A1E_02855 597959 - 597879 - | hypothetical protein A1E_02860 598626 - 598360 - | hypothetical protein TERM 494 599069 - 599096 + H 71 -4.4 -4.89562 | TCAATTATAAGATTT TTTTGAAATA TGAATAAC TATTTCAAAA TTTTATTAATTTTCG A1E_02865 599182 - 600789 + | hypothetical protein A1E_02870 601306 - 601401 + | hypothetical protein TERM 495 601716 - 601730 + T 74 -2.8 -5.66229 | opp_overlap 601717, overlap 601717 CAAGAAAGAAAAAAA ATGCTA AAT TAGCAC TTTTTTATTATTGCT TERM 496 601729 - 601717 - T 100 -6.3 -6.32017 | opp_overlap 601717 601716 AAGAAAGAAAAAAAA TGCTA AAT TAGCA CTTTTTTATTATTGC A1E_02875 602000 - 601920 - | hypothetical protein A1E_02880 602174 - 602073 - | hypothetical protein A1E_02885 603011 - 602289 - | hypothetical protein A1E_02890 603010 - 603843 + | glutamine synthetase A1E_02895 604818 - 603991 - | hypothetical protein TERM 497 605062 - 605082 + H 74 -2.7 -5.61277 | opp_overlap 605073, overlap 605075 TGCATTAATTTTATA TTTTTCTAT AAT ATACAAAAA TTTTATTTTTTTATA A1E_02900 605440 - 605832 + | transcriptional regulator TERM 498 605936 - 605964 + T 70 -5.5 -4.55383 | opp_overlap 605935 605936, overlap 605943 GATGAAATAAGGAAG CAAAAAATGTTAA TCT TTAGCATTTTTTA TTATTTTTCTAGGTT TERM 499 605943 - 605957 + T 84 -3.6 -5.80727 | opp_overlap 605935 605936, overlap 605936 TAAGGAAGCAAAAAA TGTTAA TCT TTAGCA TTTTTTATTATTTTT A1E_02905 608943 - 606064 - | cell surface antigen TERM 500 608153 - 608169 + g 70 -4.4 -4.85782 | CCTTCTTCATAGTGA GCAGTG AAATA TACTGC TTTATTTTTAGAGGG A1E_02910 610790 - 609255 - | pyruvate phosphate dikinase truB 610876 - 611757 + | tRNA pseudouridine synthase B rpsO 611922 - 612197 + | 30S ribosomal protein S15 A1E_02925 612464 - 614707 + | polynucleotide phosphorylase/polyadenylase TERM 501 614788 - 614774 - f 76 -8.6 -3.68023 | opp_overlap 614773 AATTTTTAAAACTAA CAACTC AAT GAGTTG CGCTTTTCTGGATTT TERM 502 615573 - 615563 - g 74 -5.4 -4.87665 | TGTCACGGATAAAAA CCAA AAT TTGG TAGGAATTATAACTG A1E_02930 614847 - 615806 + | KpsF protein A1E_02935 615845 - 616411 + | hypothetical protein A1E_02940 616377 - 616814 + | hypothetical protein TERM 503 616897 - 616861 - f 95 -8.4 -4.87665 | opp_overlap 616871, overlap 616865 TGGTATCCAGAAAAA TAACTTAAAATACTAA TAATT TTAGTATTTTAAACTA GAACTAGTGATCAAG TERM 504 616893 - 616865 - f 78 -9.2 -3.31603 | opp_overlap 616871, overlap 616861 ATCCAGAAAAATAAC TTAAAATACTAA TAATT TTAGTATTTTAA ACTAGAACTAGTGAT TERM 505 617039 - 617012 - g 86 -7.2 -4.77122 | CTATATAAAAAAGAA TATATTAAGTGA TGTA TCTCTTAATATA AAACAAGGGGAAATA A1E_02945 616962 - 617684 + | ABC transporter ATP-binding protein TERM 506 618821 - 618833 + G 74 -6.3 -4.48877 | opp_overlap 618816 618821 AGCGGTAAAATATTA TTTGG TGA CCAAA TTTTATGCATATTTG TERM 507 619250 - 619232 - g 77 -3.2 -5.67711 | GAAATAAAACAAAAA CTATTTGA TGA TAAAATAG CATTTAACGATATAG A1E_02950 617885 - 619432 + | polynucleotide phosphorylase/polyadenylase TERM 508 619455 - 619445 - g 72 -2.6 -5.45056 | TGAAAAAAAAAGAAA TAAT TAT ATTA TGCGGCCCTACTGCT A1E_02955 619429 - 620406 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 509 620399 - 620385 - T 75 -5.6 -4.65494 | opp_overlap 620385 620387 AAAGGAGACACAAAA CACAGC ACC GCAGTG TATATAGACCACGTG TERM 510 620975 - 620961 - T 72 -3.6 -5.21683 | opp_overlap 620972 ATTCAAAAAAATAAA TTAAGC ACT ACTTAA ATAGTTTAATTTATG miaA 623904 - 621037 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 511 621880 - 621901 + g 73 -8.9 -2.96237 | opp_overlap 621872 621883, overlap 621879 621883 621892 CATTAAATTATCAGG TAATTTAGC ACCT GCTAAATTA GTATTTTTAAAATTA TERM 512 623271 - 623283 + g 70 -4.1 -4.96762 | CTTGTGCATATATAT CCTTA CTT TGAGG TTTTTGTAATATATC nrdF 624980 - 624006 - | ribonucleotide-diphosphate reductase subunit beta TERM 513 624305 - 624289 - G 74 -7.3 -4.1196 | overlap 624277 AAGGCATCTTCAAAA TGCACGA TAG TCGTACA AGCTCCATAAATACG TERM 514 625187 - 625163 - R 76 -8.6 -3.56562 | opp_overlap 625167, overlap 625165 625181 AAATGTATTATACAA GATACCGTGG TCAAG CCACGGTATA ATACCGGACACGTTT TERM 515 625185 - 625165 - R 93 -11.2 -3.3517 | opp_overlap 625167, overlap 625163 625181 ATGTATTATACAAGA TACCGTGG TCAAG CCACGGTA TAATACCGGACACGT TERM 516 625167 - 625183 + r 80 -10.1 -2.78384 | opp_overlap 625165 625163 625181 GTATTATACAAGATA CCGTGGT CAA GCCACGG TATAATACCGGACAC A1E_02970 627049 - 625226 - | ribonucleotide-diphosphate reductase subunit alpha TERM 517 625867 - 625884 + g 81 -9.9 -3.10901 | overlap 625865 625858 TTTCTATTGAGGCTT TATCGGC TTCA GCCGATA TATATTCAAATATTT TERM 518 625924 - 625936 + g 71 -7.7 -3.47392 | opp_overlap 625924, overlap 625922 AAACTTTTGCCATAA CCGAT TCT ATCGG TACTTTTTTCATTTG TERM 519 626630 - 626618 - G 70 -6.3 -4.18934 | CATTACTTTAATAAA TGGTA TAA TACCA GATGAATGACCTTTA A1E_02975 627342 - 627244 - | hypothetical protein A1E_02980 628109 - 627951 - | hypothetical protein TERM 520 628339 - 628325 - H 85 -10 -3.48684 | TTATAAGTATCATAA GGCACA TCT TGTGCC CCTGGAAAGTATCTT A1E_02985 629165 - 630178 + | thioredoxin reductase A1E_02990 630312 - 631193 + | methylenetetrahydrofolate dehydrogenase TERM 521 631381 - 631360 - T 91 -10.3 -4.21631 | AATCTACCCAAGAAA TATTACCGT CTTT ACGGTAATA AACTATATTGATACG A1E_02995 631915 - 631337 - | sigma(54) modulation protein TERM 522 631836 - 631815 - G 73 -8.9 -2.82015 | opp_overlap 631814 TCTATATTTATTATA TCGTTAAAA TATT TTTTAACGA CTTGCGTAGCCCTAT A1E_03000 633769 - 633581 - | hypothetical protein TERM 523 633636 - 633618 - G 71 -5.4 -4.63218 | overlap 633619 GTTGCTTTAATAAAA CTTACTTT CTC AAAGTAAA AATTTCTAAAACCAT A1E_03005 634191 - 634358 + | hypothetical protein TERM 524 634598 - 634588 - g 79 -8.2 -4.08216 | GGATTCTTTGCAAAA GGCG GTT CGCC TAAATAAAGCCCATA A1E_03010 634436 - 634642 + | hypothetical protein A1E_03015 637333 - 634997 - | ribonucleotide-diphosphate reductase subunit alpha A1E_03020 637417 - 638418 + | threonine dehydratase A1E_03025 639782 - 638415 - | hypothetical protein TERM 525 639014 - 639024 + g 75 -2.6 -5.69473 | GCTCTAATTGCTTAC TAAT TTC ATTA TTTTTTTCTAATCTA A1E_03030 640416 - 640132 - | hypothetical protein A1E_03035 642409 - 640424 - | DNA helicase II TERM 526 642307 - 642331 + g 72 -4.9 -4.87626 | opp_overlap 642302 642307 CTGCAAGCAATAAAA GCGGTCCCTCA GTG TGAAGAACTGC TTTTTGCTGTTGCGG TERM 527 642331 - 642307 - G 86 -7.1 -4.78572 | opp_overlap 642307, overlap 642302 CTGCAAGCAATAAAA GCGGTCCCTCA GTG TGAAGAACTGC TTTTTGCTGTTGCGG A1E_03040 643355 - 642510 - | glycosyltransferase A1E_03045 643698 - 643345 - | hypothetical protein TERM 528 643386 - 643396 + g 75 -2.6 -5.57396 | opp_overlap 643386 TAAGAGTATTTAAAC TATA AGT TATA TTTTTTATTAGTTCT A1E_03065 644567 - 644728 + | hypothetical protein TERM 529 646089 - 646109 + T 72 -6.9 -4.12532 | opp_overlap 646089 TATTTTAATCAATCA CTGTCATCT AAG AGATGAAAG TTTGTCTATAGCGAC A1E_03080 646369 - 646151 - | transposase IS200-family protein A1E_03085 646484 - 646284 - | transposase IS200-family protein A1E_03090 646773 - 646636 - | hypothetical protein A1E_03095 647104 - 646973 - | hypothetical protein TERM 530 647187 - 647171 - R 70 -5.9 -4.42806 | opp_overlap 647171 647174, overlap 647167 TTATCTTTAAACAAA GCAGTAT CAC ATACTAC TTTAATTCATCATGG A1E_03100 648316 - 647384 - | thioredoxin reductase TERM 531 647663 - 647674 + g 74 -5.8 -4.70353 | ATTTTGAATTTTAAC TCCG GTAA CGGA TTTTGGTTTATTATC A1E_03105 649219 - 648332 - | hypothetical protein A1E_03110 650206 - 649277 - | permease TERM 532 649726 - 649738 + g 70 -6.3 -4.16279 | AAGCATTTAAAATTG GTAGT TTT ACTAC TTTTAACATACTATC A1E_03115 650523 - 650654 + | hypothetical protein A1E_03120 651146 - 651343 + | hypothetical protein A1E_03125 653396 - 651711 - | threonine dehydratase TERM 533 651944 - 651962 + g 77 -3.1 -5.5604 | overlap 651946 GCATAGAAACCATTG GATTTGC AGCAA GCAAACC TTTTTTATTGATTAC TERM 534 653486 - 653474 - H 74 -4.9 -5.0917 | TTATTAAAAAAGAAA TTCAT GTA ATGAA TATAAATAAAATAGC TERM 535 653505 - 653528 + G 75 -8.4 -3.62591 | opp_overlap 653514 653518 AAATAAAATAGCATT GATTTATAAT AAAG ATTATAAATC TTTAGCAATTATAGA A1E_03130 653482 - 654249 + | inorganic polyphosphate/ATP-NAD kinase TERM 536 654381 - 654363 - f 71 -7.6 -3.62522 | opp_overlap 654360 654363 654366, overlap 654366 TAACTTTTCTAAGAA TAATCATA TTC TATGATTA TCGCTTGAAACTCAC TERM 537 654513 - 654497 - f 81 -3 -5.80003 | TGAAGAAATAAAAAA CTCAAA ATTAG CTTGAG AATTTGCGAATTTTT TERM 538 654595 - 654583 - f 77 -4.9 -5.1963 | opp_overlap 654583 TTTAATTAATAAAAA TTCTA AAG TAGAA ATATTTTTTGAATAC A1E_03135 654603 - 654791 + | hypothetical protein A1E_03140 655103 - 655333 + | hypothetical protein A1E_03145 655891 - 656028 + | hypothetical protein A1E_03150 656714 - 656115 - | recombination protein RecR A1E_03155 657241 - 656723 - | hypothetical protein TERM 539 657369 - 657350 - H 70 -6.6 -3.90922 | opp_overlap 657350 657348 ATGGGGGTCAAACAA TATCAAAA ATTG TTTTGATA TATCTATTTTACCAA A1E_03160 657479 - 657907 + | hypothetical protein A1E_03165 657871 - 658305 + | ribosome-binding factor A TERM 540 659072 - 659058 - g 76 -6.4 -4.63993 | opp_overlap 659058 AATTTGAAAAAATAA CACCAT CTT ACGGTG ATTTTTTTGATTCAT A1E_03170 658634 - 659269 + | hypothetical protein TERM 541 659314 - 659304 - f 72 -6.8 -4.08945 | ATCATTGCCGTAAAA CTGG CAT CCAG TAACTAAAAAGTATA A1E_03175 659445 - 661484 + | acylamino-acid-releasing enzyme A1E_03180 661660 - 662820 + | succinyl-CoA synthetase subunit beta TERM 542 662902 - 662926 + F 78 -7.4 -4.45544 | opp_overlap 662881 662902 ATTTAACAAAATAAA CATATAAAAA CCTAC TTTTTATATG TTTTACTTGATCCAC TERM 543 662926 - 662902 - f 85 -7.4 -4.88795 | opp_overlap 662902, overlap 662881 ATTTAACAAAATAAA CATATAAAAA CCTAC TTTTTATATG TTTTACTTGATCCAC TERM 544 663002 - 662988 - f 70 -2.2 -5.41941 | overlap 662989 CAAATCAAATAAAAA CTTATA ATA TATAAA ATTAATTTTTAACAT TERM 545 663148 - 663160 + G 71 -7.7 -3.52472 | ACACCGGGCAAAGGC GGTGA TAC TCACC TTGATTTACCCGTAT A1E_03185 663016 - 663894 + | succinyl-CoA synthetase subunit alpha A1E_03190 664239 - 664171 - | hypothetical protein TERM 546 664216 - 664226 + g 75 -2.6 -5.64274 | opp_overlap 664216 CTCAAGTGCAAACCA TAAA GCT TTTA TTTTTTTATCCATCA A1E_03195 664342 - 664232 - | hypothetical protein TERM 547 664398 - 664419 + r 76 -3.9 -5.50774 | opp_overlap 664398 TTAGCATATTACAAA TATAAAAAT TTGT GTTTTTATA TTTTTGTTTATTCTC A1E_03200 665400 - 664600 - | Thiol:disulfide interchange protein DsbA A1E_03205 665897 - 665439 - | SsrA-binding protein A1E_03210 666778 - 665894 - | dihydrodipicolinate synthase TERM 548 666373 - 666348 - G 72 -4.7 -4.91109 | gap 1 GTCTCATCAGAAAAA TCTACTCCG-CT TCT AGTCGGTGCAGA ATATAACATAATAGG A1E_03215 667772 - 666900 - | branched-chain amino acid aminotransferase TERM 549 666953 - 666969 + g 78 -2.3 -5.75342 | TATTTGCAATTTGAT GATCATT GAA AATAATC TTTTTTTTGCCCAGG TERM 550 667863 - 667900 + H 95 -8.8 -5.02476 | opp_overlap 667848 667873, overlap 667848 CTTGATCACGGGATC CAGTTTAAAATACTAA AATTTA TTAGTATTTTAAGTTG TTTTTTGGACCCTGT A1E_03220 668028 - 668708 + | petR protein A1E_03225 668740 - 670146 + | osmolarity sensor protein EnvZ A1E_03230 670169 - 670849 + | undecaprenyl pyrophosphate synthetase TERM 551 671293 - 671309 + GF 71 -6.7 -3.99806 | opp_overlap 671285 AAAATTACTATTTTT CAAATAA AGT TTATTTG TTTATAATGAGTTGT A1E_03235 670809 - 671498 + | phosphatidate cytidylyltransferase TERM 552 671629 - 671613 - f 76 -3.8 -5.41787 | opp_overlap 671613, overlap 671607 CAAAAAACATAAAAA TACTAA TAATT TTAGTA TTTTAAACTGGATCT A1E_03240 671688 - 672023 + | hypothetical protein A1E_03245 672122 - 672733 + | ribonuclease D TERM 553 673201 - 673222 + T 77 -3 -5.62552 | TATTGTCATACCGGC GACTTGAT CACGGT ATCCAGTC TTTTTTAATTTTTTT A1E_03250 675809 - 673305 - | leucyl-tRNA synthetase TERM 554 673884 - 673858 - G 74 -5.8 -4.71828 | overlap 673859 AGCTTATTAATAAAA CGTGAACAGCCT TCA AGACCGCTCACC GACCATTCTAGATCT TERM 555 673883 - 673859 - G 78 -9.3 -3.42374 | overlap 673858 GCTTATTAATAAAAC GTGAACAGCCT TCA AGACCGCTCAC CGACCATTCTAGATC A1E_03255 676493 - 675990 - | hypothetical protein A1E_03260 677764 - 676625 - | DNA polymerase III subunit beta A1E_03265 680282 - 677769 - | phenylalanyl-tRNA synthetase subunit beta A1E_03270 681328 - 680279 - | phenylalanyl-tRNA synthetase subunit alpha A1E_03275 682632 - 681364 - | MiaB-like tRNA modifying enzyme A1E_03280 683434 - 682625 - | diaminopimelate epimerase TERM 556 683503 - 683474 - H 75 -9.6 -2.5919 | opp_overlap 683470 683469 683479, overlap 683470 683479 TATTATAGCAATGTA TTATAGCAAATT GCTTAG AATTTGCTATAA TGAAGTTATATACAA TERM 557 683963 - 683948 - H 95 -6.2 -5.64274 | opp_overlap 683950 683954 TCACCGATAAAAAAA GATTTG TGAT CAAATC ATAGATTACTTGATA TERM 558 684097 - 684072 - g 70 -4.1 -5.07486 | CACCTTCAAGAAAAA TTGGCATATTT CTTT AAACATGCAAA TGAAAGCACTCTAGA A1E_03285 684072 - 684275 + | hypothetical protein A1E_03290 684351 - 684431 + | hypothetical protein TERM 559 684719 - 684700 - g 83 -8 -4.329 | opp_overlap 684713, overlap 684711 TAATAGAGCAATAAA TTTTAGCA AACT TGCTAAAA TAGCTAATATTAAGT A1E_03295 684434 - 685597 + | capM protein A1E_03300 685668 - 685820 + | RND efflux system, outer membrane protein A1E_03305 687234 - 686575 - | hypothetical protein A1E_03310 688628 - 687564 - | N-acetylglucosaminyl transferase A1E_03315 689764 - 688625 - | cell division protein FtsW TERM 560 689758 - 689785 + g 70 -4.4 -4.89477 | opp_overlap 689764, overlap 689764 689784 ATATTTCGGTATTTT TAAACATTTTAT GGTT ATAAAATTTTTA TTTTGTTGTTAACAA TERM 561 689764 - 689779 + g 79 -3.4 -5.64321 | opp_overlap 689764, overlap 689758 CGGTATTTTTAAACA TTTTAT GGTT ATAAAA TTTTTATTTTGTTGT A1E_03320 689956 - 690534 + | hypothetical protein A1E_03325 690832 - 691035 + | hypothetical protein A1E_03330 692409 - 691042 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase A1E_03335 692801 - 692556 - | hypothetical protein A1E_03340 693412 - 692822 - | lipoprotein signal peptidase TERM 562 692884 - 692902 + g 89 -10.4 -3.80207 | CCATAGCTTTAATTT GAGCATTA TCA TAATGCTC TTTAGCCTTTTCTTC A1E_03345 695081 - 693708 - | hypothetical protein TERM 563 695177 - 695159 - H 70 -4.7 -4.65722 | opp_overlap 695159 695175 CCATATATAAATAAA TTACAAT AGAAA ATTGTAA AATTTTGTTTTATTT A1E_03350 695834 - 696625 + | cytochrome c oxidase polypeptide II A1E_03355 696664 - 697047 + | virginiamycin A acetyltransferase TERM 564 698487 - 698513 + G 72 -5.1 -4.91778 | TGGTTTCATCGATAG GAGCAGGTATC TCTAT GTTAGCTGCTC TTTATTTTGTATTTA A1E_03360 697067 - 698665 + | cytochrome c oxidase polypeptide I TERM 565 699432 - 699462 + G 71 -9 -2.58783 | overlap 699431 699428 699441 ATGGTTAATTCGACC CATCACCAGGCTGT TAA ACAGCTTGGTAACG ATCTTATCATATCTG A1E_03365 698892 - 699629 + | hypothetical protein A1E_03370 700089 - 702875 + | hypothetical protein A1E_03375 703805 - 702858 - | microcin C7 self-immunity protein A1E_03380 704253 - 704098 - | hypothetical protein A1E_03385 707185 - 705230 - | soluble lytic murein transglycosylase precursor A1E_03390 707783 - 707337 - | deoxyuridine 5'-triphosphate nucleotidohydrolase A1E_03395 708700 - 707786 - | protease sohB A1E_03400 709368 - 708700 - | Thiol:disulfide interchange protein TlpA A1E_03405 710256 - 709630 - | protocatechuate-3,4-dioxygenase, beta subunit A1E_03410 710397 - 711392 + | hypothetical protein A1E_03415 711613 - 711440 - | hypothetical protein A1E_03420 711696 - 712073 + | hypothetical protein TERM 566 712901 - 712877 - g 80 -5.9 -5.05113 | TTTATACAAATAAAA TTAAGATATTC CAC AAATACCTTAA TATCAGTACAAAACA A1E_03425 712082 - 712921 + | FTR1 family protein A1E_03430 712961 - 713503 + | intracellular septation protein A A1E_03435 713500 - 714279 + | hypothetical protein TERM 567 714288 - 714304 + G 80 -5.3 -5.16132 | opp_overlap 714277, overlap 714277 ACCATAAACTTAGTT TATTAAT TTT ATTAATA TTTTGTTTTGGTCTA A1E_03440 714263 - 714949 + | rare lipoprotein A precursor A1E_03445 715996 - 715076 - | penicillin-binding protein DacF precursor TERM 568 715920 - 715954 + g 100 -13.9 -3.05963 | AGGGTATTTTGTACA TTTTTCTTTGCTTCA CTTAT TGGAGCAAAGAAAAA TGTTGCGATAAAAAT TERM 569 716135 - 716119 - R 77 -9.4 -2.87132 | TTGTTTCTCTAGATA CCGTGG TCAAG CCACGG TATGACAATAATACT A1E_03450 717397 - 716153 - | AmpG protein TERM 570 717342 - 717313 - G 71 -2.1 -5.38321 | overlap 717316 717319 717320 AAAGAGTAGAAAAAA TTATAACTAGCGG CATA CCGCTAACTATCC CTAAAATCAATATTT TERM 571 717339 - 717316 - G 73 -8.2 -3.46407 | overlap 717313 717319 717320 GAGTAGAAAAAATTA TAACTAGCGG CATA CCGCTAACTA TCCCTAAAATCAATA TERM 572 717336 - 717319 - G 74 -7.7 -3.83985 | overlap 717316 717313 717320 TAGAAAAAATTATAA CTAGCGG CATA CCGCTAA CTATCCCTAAAATCA TERM 573 717335 - 717320 - G 73 -9 -2.88764 | overlap 717319 717316 717313 AGAAAAAATTATAAC TAGCGG CATA CCGCTA ACTATCCCTAAAATC A1E_03455 719335 - 717572 - | multidrug resistance protein TERM 574 717888 - 717847 - G 71 -8.7 -2.8372 | overlap 717846 717856 717864 CATCTTTTAGGAAAG CTCTAGCAAGCGATAAACG CTGA CGCTCACCGCCTGAAAGAG TCATCCCCTGCACTC TERM 575 718495 - 718467 - G 71 -3.1 -5.23016 | AAAGAAGCCAAAAAA GCAAAAAGAGCAC CGG GTGTACTTTTTCC ATTAAGGACTAAATT A1E_03460 720356 - 719328 - | Holliday junction DNA helicase B TERM 576 720912 - 720932 + r 78 -7 -4.55653 | opp_overlap 720911 720912, overlap 720928 ATTTGTAGCAGTAAT TTCTCTAA TATCT TTAGAGAA TTGTTTTCTTGTTCT A1E_03465 721146 - 720946 - | hypothetical protein TERM 577 721223 - 721248 + r 86 -9.1 -4.2461 | overlap 721225 AATATTATATCATGT CTCAACAAACT CTAG AGTTTGTTGTG TTTATTAATGGAAGT TERM 578 721225 - 721246 + r 90 -10.3 -3.72374 | overlap 721223 TATTATATCATGTCT CAACAAACT CTAG AGTTTGTTG TGTTTATTAATGGAA A1E_03470 721723 - 721433 - | hypothetical protein A1E_03475 722468 - 721854 - | Holliday junction DNA helicase motor protein A1E_03480 722718 - 722470 - | hypothetical protein A1E_03485 723187 - 722957 - | hypothetical protein A1E_03490 723554 - 723366 - | hypothetical protein TERM 579 723499 - 723517 + g 78 -6 -4.85618 | opp_overlap 723497 723499 AGCTCATAAGAAATA TCTTGTGA TAA TCCCAAGA TTTTATTAGTTATTT A1E_03495 725036 - 723720 - | prolyl-tRNA synthetase TERM 580 723802 - 723813 + g 86 -7.2 -4.74103 | ATATCTTCTATCACT CCGC TTTT GCGG TTTTTAAATTCAACA A1E_03500 725786 - 725127 - | GTP cyclohydrolase I TERM 581 725696 - 725712 + g 78 -5.9 -4.85782 | CTCTAGACGGTTTTT CAAGTTT CAT AAGCTTG TTTGTTTTTAAAAAC A1E_03505 726935 - 725919 - | hypothetical protein TERM 582 726654 - 726687 + g 95 -12.6 -3.73775 | opp_overlap 726654 GTCATTCCCACGAAA GCGAGAATCTAGTA TATTTT TTCTAGATTCTCGC TTTCGTGGGAATGAC TERM 583 726687 - 726654 - G 95 -12.6 -3.73775 | opp_overlap 726654 GTCATTCCCACGAAA GCGAGAATCTAGTA TATTTT TTCTAGATTCTCGC TTTCGTGGGAATGAC A1E_03510 727622 - 727506 - | hypothetical protein TERM 584 727770 - 727786 + H 70 -8.7 -2.62396 | overlap 727772 TTGAACTTCCGACCT CACGCTT ATC AGGCGTG TGCTCTAACCACCTG A1E_03515 728159 - 728893 + | 3-deoxy-manno-octulosonate cytidylyltransferase A1E_03520 728871 - 729038 + | hypothetical protein TERM 585 730000 - 730012 + F 77 -7.7 -4.16842 | opp_overlap 729994 GTAATCGAAGCACTG TACCG TGC CGGTA TTTATTACAAATACA TERM 586 730994 - 731015 + G 74 -5.9 -4.62803 | overlap 730999 TATCAAACTTTGGGG TGAAATGCC TATG GGCGTTTTA TTTGTTATTCTTTAC TERM 587 730999 - 731010 + G 72 -3.6 -5.18297 | overlap 730994 AACTTTGGGGTGAAA TGCC TATG GGCG TTTTATTTGTTATTC TERM 588 732084 - 732049 - g 78 -7 -4.49958 | ATGCTACTAAAGAAA TGGTATATATTCCACT CGAT AGTGAAATAAAGACCA AAGGTAAAGCTGCTG A1E_03535 730770 - 732293 + | ADP,ATP carrier protein TERM 589 732977 - 732958 - g 74 -9.4 -2.63715 | opp_overlap 732957 AGGTATTCCACAGTA TCAGGTAT ACCG ATACCTGA CTTGATAAAAATGGG A1E_03540 732388 - 733332 + | malate dehydrogenase A1E_03545 734040 - 734252 + | hypothetical protein TERM 590 734551 - 734530 - f 70 -8.8 -2.73854 | overlap 734529 734542 AAGAATTTATAGAAG CTGCTAAG AATATA CTTAGCAG AAGTATCTCAGTAAA A1E_03550 734623 - 734865 + | hypothetical protein A1E_03555 735025 - 735234 + | hypothetical protein A1E_03560 735322 - 735426 + | hypothetical protein A1E_03565 735444 - 735584 + | hypothetical protein A1E_03570 735933 - 736106 + | hypothetical protein TERM 591 736142 - 736118 - T 73 -8.7 -3.06831 | opp_overlap 736118, overlap 736120 CTAATCTTTATTGAA TAGCGGATTAT ATG ATAATGCGCTA TTTGCGTTTACATAA TERM 592 736118 - 736142 + T 78 -8.7 -3.85909 | opp_overlap 736118 736120 CTAATCTTTATTGAA TAGCGGATTAT ATG ATAATGCGCTA TTTGCGTTTACATAA A1E_03575 737468 - 736140 - | proline/betaine transporter TERM 593 736679 - 736708 + g 93 -6.7 -5.33405 | TTATTAGTAATGCTA TTATAAAAGAGAA TAAA TTATCTTTTATAA TTTTTATTTGCTGCA TERM 594 736873 - 736847 - G 73 -9 -2.90194 | opp_overlap 736847 736845 736848 736852, overlap 736852 ACTTTTTGAATGACA CTGAATTTTTAT AAT ATAAAAATTCAA TACTTTCTTTAAAAA TERM 595 736848 - 736872 + g 79 -10.3 -2.50589 | opp_overlap 736847 736852, overlap 736847 736845 736852 CTTTTTGAATGACAC TGAATTTTTAT AAT ATAAAAATTCA ATACTTTCTTTAAAA A1E_03580 737868 - 737776 - | hypothetical protein A1E_03585 740397 - 738097 - | malic enzyme TERM 596 738183 - 738199 + g 100 -10.9 -4.30987 | CTTGAAGTATTTGAA CGGGTTT TTC AAACCCG TTTGTTATAGGACCT A1E_03590 741447 - 740506 - | permease TERM 597 740838 - 740858 + g 71 -5.5 -4.63218 | opp_overlap 740829, overlap 740840 CAATAGCTAAAGCGG CATTAGATA AGC TATCTAACG TTTTCTTCAGCCCCA TERM 598 741466 - 741516 + r 93 -12.1 -2.57192 | gap 1, opp_overlap 741468, overlap 741462 TTTTCGTTGTCATAC CAGTGTTCTATATGTCATTCCCGC TTTT GCGGGAATGACATAAA-AACCCTA TAACTTCCGTTCAAT TERM 599 741514 - 741468 - R 100 -16.9 -2.62184 | gap 1, opp_overlap 741466 741462 TTCGTTGTCATACCA GTGTTCTATATGTCATTCCCGC TTTT GCGGGAATGACATA-AAAACCC TATAACTTCCGTTCA A1E_03595 743082 - 741514 - | lysyl-tRNA synthetase A1E_03600 743307 - 743825 + | hypothetical protein A1E_03605 744102 - 743932 - | ABC transporter permease protein A1E_03620 746547 - 745759 - | hypothetical protein A1E_03625 746979 - 746785 - | hypothetical protein A1E_03630 748647 - 747157 - | apolipoprotein N-acyltransferase TERM 600 748897 - 748882 - g 95 -9 -4.94902 | GAAGTACTAGAAAAA CGAGTG AAAC CACTCG CTGAAGAAATAGGCT A1E_03635 748738 - 749520 + | enoyl-(acyl carrier protein) reductase A1E_03640 749915 - 749781 - | hypothetical protein TERM 601 749810 - 749835 + g 70 -4.1 -5.00138 | overlap 749812 AATTTGTTTCCACTG TTCTTGTACTT AGAG AAGTATGAGGA TTTTTAATTTCACTA A1E_03645 750694 - 750599 - | hypothetical protein TERM 602 750755 - 750766 + r 76 -4.4 -5.22768 | ATTTATTAAATTTTT CAGT ATTC ACTG TTTCTTTTTTATTGT A1E_03650 751812 - 750898 - | hypothetical protein A1E_03655 752807 - 751881 - | site-specific tyrosine recombinase XerD TERM 603 753856 - 753844 - H 78 -7.7 -4.26681 | ATAAATCATCTAAAA TGCAG ACG CTGCA TAACTAAAAGTTTGT A1E_03660 754456 - 754929 + | hypothetical protein A1E_03665 754930 - 756177 + | hypothetical protein A1E_03670 756328 - 756699 + | NADH dehydrogenase subunit A A1E_03675 756704 - 757228 + | NADH dehydrogenase subunit B A1E_03680 757206 - 757796 + | NADH dehydrogenase subunit C A1E_03685 757959 - 758084 + | hypothetical protein A1E_03690 758161 - 759348 + | NADH dehydrogenase subunit D A1E_03695 759367 - 759582 + | hypothetical protein A1E_03700 759697 - 760200 + | NADH dehydrogenase subunit E A1E_03705 760193 - 760459 + | hypothetical protein A1E_03710 760593 - 761135 + | 3-methyladenine DNA glycosylase A1E_03715 762277 - 762035 - | exodeoxyribonuclease VII small subunit A1E_03720 764922 - 762292 - | hypothetical protein TERM 604 764259 - 764234 - G 70 -7.1 -3.60431 | gap 1, opp_overlap 764236 AAAAGTAGTTTTAAA TCTGGTAATATA CTA TATATTACC-GA CGCTAAATTTTTAAG A1E_03725 764991 - 765488 + | 16S rRNA-processing protein TERM 605 766252 - 766236 - T 73 -3 -5.47821 | ATGCATCTAAAAAAA CTCTCT AGCGA AGAAAG GATTTGCAAATGCAC A1E_03740 768822 - 768727 - | hypothetical protein A1E_03745 769342 - 769527 + | hypothetical protein A1E_03750 770056 - 769712 - | hypothetical protein A1E_03755 771653 - 770730 - | protoheme IX farnesyltransferase TERM 606 772039 - 772056 + G 72 -8.5 -3.17956 | GGGAAAACTTCATTG GTCTACT TGAA AGTAGAC TTGATACGGTAGTTT A1E_03760 771771 - 772388 + | 30S ribosomal protein S4 A1E_03765 773890 - 772712 - | glycosyltransferase TERM 607 774437 - 774413 - g 70 -7.3 -3.6944 | overlap 774411 TTGTGAACATAAATA TCCTATTAGCT ATA AACTAATAGAA GATGCAAAAAAATAT A1E_03770 774024 - 774683 + | hydrolase or acyltransferase TERM 608 775378 - 775345 - g 78 -9.8 -3.22425 | overlap 775343 AATAATAATCGAAGA TTTTAGTGCAGGCT ACGGTA AACCTACACTAAAA GACGGAATAATTTAC A1E_03775 774911 - 775675 + | hypothetical protein A1E_03780 775680 - 776816 + | RND family efflux transporter MFP subunit A1E_03785 777858 - 776818 - | hypothetical protein TERM 609 777315 - 777296 - GT 73 -4.4 -5.02323 | opp_overlap 777296 GCAGGATAAATAAAA TCAAATTT TTTA AAATCTGA ATTTTTCTTTTTTAC A1E_03790 778796 - 777828 - | minor teichoic acids biosynthesis protein ggab (ggab) A1E_03795 779996 - 778797 - | glycosyltransferase TERM 610 779044 - 779033 - G 70 -7.2 -3.67634 | GAGCATGGCAAAAGA CCGG TCTA CCGG AAGCAAAATATGTAA A1E_03800 781216 - 779993 - | glycosyltransferase A1E_03805 782391 - 781249 - | hypothetical protein TERM 611 781803 - 781813 + g 72 -2.6 -5.4833 | TAAAATAATTTTCGG TATA TAC TATA TTTTTTATTGCATAA TERM 612 781919 - 781935 + g 76 -7.3 -4.34263 | CATCCGGGAAAATCT TCTGGAT ACC ATCCGGA TTTATGTTCTTGCCA TERM 613 782125 - 782113 - G 72 -4.9 -4.76644 | opp_overlap 782104 AACATCTATTAAAAA TATTG AAT CAATA GATTTATCAGAAAAT A1E_03810 783518 - 782388 - | UDP-N-acetylglucosamine 2-epimerase A1E_03815 784536 - 783511 - | capD protein TERM 614 783815 - 783849 + g 78 -5.8 -4.83169 | opp_overlap 783828, overlap 783816 AATATATCTTGTAAC GCTTTTGCAAGTAC TGCAATT GTACTTGCAGGAGA TTTTTGTACAAAAAT TERM 615 783816 - 783848 + g 78 -9.3 -3.49419 | opp_overlap 783828, overlap 783815 ATATATCTTGTAACG CTTTTGCAAGTAC TGCAATT GTACTTGCAGGAG ATTTTTGTACAAAAA TERM 616 784646 - 784674 + r 72 -4.8 -4.8236 | opp_overlap 784652, overlap 784652 ATCGCGGAATCCAGT TTAAAATACTAA AATTA TTAGTATTTTTA TTGTTTTTTTGGATA TERM 617 784652 - 784668 + r 76 -3.8 -5.54403 | opp_overlap 784652, overlap 784646 GAATCCAGTTTAAAA TACTAA AATTA TTAGTA TTTTTATTGTTTTTT A1E_03820 785600 - 784746 - | putative dTDP-4-dehydrorhamnose reductase A1E_03825 785686 - 785820 + | hypothetical protein TERM 618 785891 - 785907 + TF 76 -6.7 -4.46669 | overlap 785900 ATAAATCAATATCTT TATACTT ATC AAGTATA TTTCTTGCTTTTCCT A1E_03830 786621 - 786157 - | Holliday junction resolvase-like protein A1E_03835 786620 - 788224 + | hypothetical protein A1E_03840 788315 - 788419 + | hypothetical protein A1E_03845 788594 - 789529 + | hypothetical protein A1E_03850 789611 - 790213 + | thioredoxin peroxidase 1 TERM 619 791161 - 791129 - f 71 -7.7 -3.58184 | overlap 791130 ATATTAGAATTAGAA CTCACCGGTAAAGTG GTA CACCATACCGGTAAT AAAATCTCATTAGTT TERM 620 791160 - 791130 - f 87 -11.2 -2.74188 | overlap 791129 TATTAGAATTAGAAC TCACCGGTAAAGTG GTA CACCATACCGGTAA TAAAATCTCATTAGT A1E_03865 791189 - 793522 + | DNA topoisomerase I A1E_03870 793687 - 795024 + | glutamyl-tRNA synthetase A1E_03875 795440 - 795318 - | hypothetical protein A1E_03880 795788 - 795489 - | hypothetical protein TERM 621 795874 - 795889 + r 72 -3.4 -5.3671 | AGTAATATTTAGTCA TTAAAA AACT TTTTAA TTTTTTGCTTATCTT A1E_03885 796347 - 796213 - | hypothetical protein A1E_03890 796899 - 796669 - | hypothetical protein A1E_03895 797960 - 797625 - | frataxin-like protein TERM 622 797737 - 797724 - G 77 -3.1 -5.60993 | TTGTTCATAAAAAAA GTGAT AAGG ACCAC TAACCGGCGACGATA A1E_03900 798964 - 797957 - | hypothetical protein TERM 623 798537 - 798547 + g 76 -5.4 -4.99043 | ATTAAAAAACCTTCC GGTA TTA TACC TTTTATTTCTCCAAG A1E_03905 799276 - 799575 + | hypothetical protein A1E_03910 800716 - 799559 - | lipid-A-disaccharide synthase ppnK 800881 - 800747 - | inorganic polyphosphate/ATP-NAD kinase A1E_03920 801256 - 801104 - | hypothetical protein A1E_03925 801467 - 801321 - | hypothetical protein A1E_03930 802160 - 801861 - | hypothetical protein A1E_03935 802396 - 802289 - | hypothetical protein A1E_03940 804186 - 802834 - | ATP-dependent protease ATP-binding subunit TERM 624 804144 - 804156 + g 95 -9.1 -5.28778 | TTTGAGCAGGGGTAA GACCC ATA GGGTC TTTTTTATAAGTAAT A1E_03945 804731 - 804183 - | ATP-dependent protease peptidase subunit TERM 625 805027 - 805053 + G 75 -9.6 -2.93073 | overlap 805023 805029 ATAAAATGTGGTTAG TATTTGCTATTG CTA CATTAGCAAATA TAATTATTACAGCAA A1E_03950 804897 - 805250 + | hypothetical protein A1E_03955 805449 - 805811 + | hypothetical protein A1E_03960 805804 - 806820 + | aspartate-semialdehyde dehydrogenase A1E_03965 806834 - 808594 + | hypothetical protein A1E_03970 808721 - 810256 + | hypothetical protein TERM 626 810286 - 810331 + F 81 -8 -4.32607 | opp_overlap 810285 810287 810293 810296, overlap 810287 810325 TCATCCAATAGTAAT ATATTAAGAATTTTTAATGA ATATTA TCATTAAAATTTCTTAATAA TTTATTGACTTTTAA TERM 627 810287 - 810330 + F 93 -11.5 -3.18479 | opp_overlap 810285 810287 810293 810296, overlap 810286 810325 CATCCAATAGTAATA TATTAAGAATTTTTAATGA ATATTA TCATTAAAATTTCTTAATA ATTTATTGACTTTTA TERM 628 810330 - 810287 - f 93 -11.5 -3.25787 | opp_overlap 810287 810286 810325, overlap 810285 810293 810296 CATCCAATAGTAATA TATTAAGAATTTTTAATGA ATATTA TCATTAAAATTTCTTAATA ATTTATTGACTTTTA A1E_03975 810394 - 811710 + | hypothetical protein A1E_03980 812368 - 811661 - | hypothetical protein TERM 629 812436 - 812475 + r 73 -4.6 -5.00884 | opp_overlap 812464 TATGTTTTCTTTTTT CTATTTTTAATGTTAAAT AATA ATTATATATTAAAAATAG TTTTTTACAAAAGGT A1E_03985 814259 - 813309 - | hypothetical protein A1E_03990 814680 - 814249 - | hypothetical protein A1E_03995 815408 - 814680 - | hypothetical protein TERM 630 816321 - 816341 + H 89 -11.2 -2.89527 | overlap 816318 ATTCTACCCCTATCA TCCCACGA CTTAA TCGTGGGA TCCTTATAATATTAA A1E_04000 816919 - 817065 + | hypothetical protein TERM 631 817317 - 817299 - f 70 -5.4 -4.59853 | TTAACTGCTGAAAAA TTTGAAAA GAT TTTCCAAA ATGTTGAAAGTGCTT A1E_04005 817414 - 817629 + | hypothetical protein A1E_04010 819190 - 817943 - | histidyl-tRNA synthetase TERM 632 819275 - 819296 + r 78 -7.3 -4.50686 | overlap 819264 819263 TTATTGTAATCCCGT GACTTGATC ACGG GATCCAGTC TTTGTTAATTTTTAA A1E_04015 820753 - 819353 - | hypothetical protein TERM 633 820556 - 820540 - G 76 -7.3 -4.2679 | opp_overlap 820553, overlap 820542 CAAGTGCTACGAAAA TACAGGT AAT ACCTGCA ATCGCATAAGATAGC TERM 634 820554 - 820542 - G 73 -7.7 -3.7331 | opp_overlap 820553, overlap 820540 AGTGCTACGAAAATA CAGGT AAT ACCTG CAATCGCATAAGATA TERM 635 820844 - 820865 + r 93 -3.7 -6.12458 | TTGGTGTCATACCGC GACTTGATT ACGG GATCCAGTC TTTTTTATTTTTTTG A1E_04020 822003 - 820897 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 636 822820 - 822831 + G 72 -5.8 -4.43307 | opp_overlap 822819 TATTGTGCGTAATAC CGAG CTTT CTCG TTCTTTTATTGAAAA A1E_04025 822218 - 823201 + | hypothetical protein A1E_04030 823792 - 823607 - | hypothetical protein A1E_04035 824454 - 824329 - | hypothetical protein A1E_04040 824714 - 824496 - | hypothetical protein TERM 637 824967 - 824947 - R 82 -9.1 -3.77553 | opp_overlap 824946 TAATAGCAGTAATAA CTTTAGATG ATG CACCTAAAG GATTTTCAACAAGTG A1E_04045 826144 - 825596 - | cytochrome C oxidase assembly protein TERM 638 825902 - 825928 + g 93 -8.1 -5.25803 | AATTTGCACTCTTTG TTGCCTTGG AATAAAACG CCAAGGCAA TTTTTTATCAACATT TERM 639 826521 - 826510 - g 77 -3 -5.53991 | opp_overlap 826510 CAGGCAGTAAAAAAA TTCA ACCC TGAA CTTGGTTTTCGCCTA TERM 640 826928 - 826911 - g 80 -6.3 -4.79223 | TTATACTACTAAAAA GCACTTA CTAG CAAGTGC TATGAAGATTTTAAA A1E_04050 826234 - 827124 + | RNA polymerase factor sigma-32 A1E_04055 828584 - 827250 - | translocation protein TolB TERM 641 828108 - 828089 - G 70 -8 -3.05022 | TTTCTGATACATACA CTATTTTG GTAT CAAAATAG CCAGCATCACCAGTA A1E_04060 829659 - 828769 - | FAD-dependent thymidylate synthase A1E_04065 830372 - 830244 - | hypothetical protein A1E_04070 831187 - 830528 - | hypothetical protein TERM 642 830853 - 830863 + g 71 -6.8 -4.12942 | overlap 830830 TCGGTAATAATTACC CCGT TTA ACGG TTTTGCAAAGTTTAA TERM 643 831372 - 831350 - H 90 -10.8 -3.37975 | opp_overlap 831352 831356, overlap 831356 ATCGATTATTTAGAA CATAAATCTT TAA AAGATTTATG ATTGCGGAACAAATA A1E_04075 831426 - 831554 + | hypothetical protein A1E_04080 832246 - 832040 - | hypothetical protein TERM 644 833068 - 833082 + G 81 -4.3 -5.47399 | overlap 833080 AAATTTTCGTATTAC CTATC AAGTA GATAG TTTTTTTGCAGTTAA A1E_04085 832412 - 835087 + | DNA mismatch repair protein A1E_04090 836006 - 835227 - | hypothetical protein A1E_04095 836808 - 836008 - | hypothetical protein TERM 645 836254 - 836264 + g 80 -5.4 -5.13137 | opp_overlap 836254 TATAATTTTCAAGAA CTCT ATA AGAG TTTTTACTTTATTTA A1E_04100 837859 - 836945 - | hypothetical protein A1E_04105 838206 - 838424 + | hypothetical protein TERM 646 838820 - 838808 - T 79 -4.9 -5.38839 | GAGATAAAAAGAAAA GTTAA TAT TTAAC CTAGCAATTATGCAA A1E_04110 840180 - 840013 - | hypothetical protein A1E_04120 841311 - 841156 - | hypothetical protein A1E_04125 841881 - 841693 - | hypothetical protein TERM 647 841879 - 841865 - G 72 -8.6 -3.14051 | TTATCTTGAGTAACA GGAAGT AAC ACTTCC ACCTGCTTCTTTCAA A1E_04130 842769 - 842599 - | hypothetical protein A1E_04135 842956 - 842858 - | hypothetical protein A1E_04140 843499 - 843134 - | hypothetical protein A1E_04150 844620 - 844507 - | hypothetical protein TERM 648 845265 - 845255 - R 71 -2.6 -5.38348 | AAAAATATCAAAAAA TATA CGC TATA AGTTGTTTCTTGGAT A1E_04155 846793 - 845381 - | hypothetical protein TERM 649 846321 - 846309 - G 82 -6.3 -4.95155 | opp_overlap 846307 846309 CCGACATCACAAAAA TTGCT CCT AGCAA TAATTTTAGTACCAA A1E_04160 848578 - 846803 - | hypothetical protein A1E_04165 849755 - 848751 - | hypothetical protein A1E_04170 851200 - 849752 - | hypothetical protein A1E_04175 851819 - 851337 - | hypothetical protein A1E_04180 852534 - 851806 - | hypothetical protein TERM 650 853031 - 853071 + H 78 -5.8 -4.88786 | opp_overlap 853036 853039 853051 853061, overlap 853032 TGCAAAACAGCATGA GTATACAATAATAACTAT AATCA ATAATTATTATTGTATAA TTTATTTATTTTCAT TERM 651 853032 - 853070 + H 82 -9.3 -3.50831 | opp_overlap 853036 853039 853051 853061, overlap 853031 GCAAAACAGCATGAG TATACAATAATAACTAT AATCA ATAATTATTATTGTATA ATTTATTTATTTTCA A1E_04185 853281 - 853979 + | hypothetical protein A1E_04190 853981 - 854733 + | hypothetical protein TERM 652 854910 - 854884 - g 80 -7.4 -4.58283 | opp_overlap 854890 854892, overlap 854885 854890 TAAGTCTTGGAAAAA TTAAAACAGGTG GTG CACCTATTTTAC AAGAGGGTATTACTA TERM 653 854909 - 854885 - g 85 -10.9 -3.34488 | opp_overlap 854890 854892, overlap 854884 854890 AAGTCTTGGAAAAAT TAAAACAGGTG GTG CACCTATTTTA CAAGAGGGTATTACT TERM 654 854904 - 854890 - g 80 -6.4 -4.77757 | opp_overlap 854890 854892, overlap 854885 854884 TTGGAAAAATTAAAA CAGGTG GTG CACCTA TTTTACAAGAGGGTA A1E_04195 854736 - 855071 + | putative monovalent cation/H+ antiporter subunit C TERM 655 856392 - 856413 + G 80 -8.9 -3.57783 | opp_overlap 856391 856397, overlap 856397 GAATTATTATTAACG CAAAATCTA CTAT TAGATTTTG TTATAATTGTACTCA A1E_04200 855204 - 856490 + | putative monovalent cation/H+ antiporter subunit D A1E_04205 856821 - 857012 + | hypothetical protein A1E_04210 857205 - 858668 + | putative monovalent cation/H+ antiporter subunit D TERM 656 858714 - 858671 - f 74 -6.3 -4.5954 | opp_overlap 858679 TTATATTACATAAAA CATATTTACATAATTTATG TATAAT CATATAACATGTAAATATG GTAGTTATTTTTGAA A1E_04215 858731 - 858883 + | antitoxin of toxin-antitoxin system VapB A1E_04220 859012 - 859389 + | putative monovalent cation/H+ antiporter subunit D TERM 657 859986 - 860000 + G 75 -5 -5.07567 | AAATTATTTAGTGGT CTTGAG ATA CTTAAG TTTTTTGGAATATCA A1E_04225 859398 - 860918 + | putative monovalent cation/H+ antiporter subunit D TERM 658 861757 - 861739 - g 80 -5.4 -5.18371 | overlap 861741 CTGCACAAAATAAAA TATTCTAT GAA ATAGAACA TGAAAGCGATTATTT TERM 659 862347 - 862358 + G 79 -7.2 -4.42464 | ATGGCAGTAACCCTT GCCG ATCG CGGC TTTATTTACGCAGTT A1E_04230 860925 - 862979 + | protease II A1E_04235 863165 - 864265 + | putative monovalent cation/H+ antiporter subunit D TERM 660 864490 - 864502 + T 70 -6.3 -4.07678 | opp_overlap 864490 864488 CAGCAATAATAGATA GGATT TTT AATCC TTTGGTATTTTAACA TERM 661 864705 - 864680 - T 85 -9.9 -3.3482 | opp_overlap 864682, overlap 864700 CAACCTTTTAATCAA TAGCAAACTAC ATAA GTAATTTGCTA TTGGCAATAGATAAG rpsT 865316 - 865044 - | 30S ribosomal protein S20 TERM 662 865218 - 865228 + g 70 -4 -5.08601 | TTCATTTACAACTTT CTTT ATA AAAG TTTTTATTGCACTAG rplQ 865745 - 865335 - | 50S ribosomal protein L17 TERM 663 865695 - 865681 - G 77 -10 -2.65815 | opp_overlap 865681 GCTACAGCCATATTA GCAAGC ATT GCTTGC CTATGACTACTTGTT A1E_04250 866780 - 865758 - | DNA-directed RNA polymerase subunit alpha A1E_04255 867182 - 866799 - | 30S ribosomal protein S11 rpsM 867643 - 867206 - | 30S ribosomal protein S13 adk 868278 - 867640 - | adenylate kinase secY 869595 - 868294 - | preprotein translocase subunit SecY rplO 870060 - 869599 - | 50S ribosomal protein L15 TERM 664 869815 - 869844 + g 72 -3.7 -5.27477 | opp_overlap 869840, overlap 869817 869840 ATCGGCTAATGCTAC TTCAATATTGTAA ATAT TTACTATATTGTA TTTTTTAGTTGAAAT TERM 665 869817 - 869842 + g 70 -6.3 -4.26777 | opp_overlap 869840, overlap 869815 869840 CGGCTAATGCTACTT CAATATTGTAA ATAT TTACTATATTG TATTTTTTAGTTGAA rpmD 870265 - 870074 - | 50S ribosomal protein L30 rpsE 870818 - 870300 - | 30S ribosomal protein S5 TERM 666 870852 - 870874 + r 91 -10.6 -4.07885 | overlap 870853 TAAAATTTTATTTTC TCTCTAGCTG CAT CAGCTAGAGC TTTTACAACACCGTG TERM 667 870853 - 870873 + r 100 -14.1 -3.04517 | overlap 870852 AAAATTTTATTTTCT CTCTAGCTG CAT CAGCTAGAG CTTTTACAACACCGT rplR 871192 - 870836 - | 50S ribosomal protein L18 rplF 871741 - 871208 - | 50S ribosomal protein L6 rpsH 872148 - 871750 - | 30S ribosomal protein S8 rpsN 872473 - 872168 - | 30S ribosomal protein S14 rplE 873029 - 872484 - | 50S ribosomal protein L5 rplX 873358 - 873029 - | 50S ribosomal protein L24 TERM 668 873120 - 873109 - G 70 -4.4 -4.8143 | opp_overlap 873115 873116 CTAAGAATTTAAAAA CTAC TTTG GTAG GTCTACCGGTTTTTG rplN 873727 - 873359 - | 50S ribosomal protein L14 rpsQ 874033 - 873800 - | 30S ribosomal protein S17 rpmC 874250 - 874035 - | 50S ribosomal protein L29 rplP 874653 - 874243 - | 50S ribosomal protein L16 rpsC 875321 - 874668 - | 30S ribosomal protein S3 rplV 875682 - 875323 - | 50S ribosomal protein L22 TERM 669 875647 - 875662 + g 93 -6.2 -5.52079 | overlap 875658 TCTAATAGATTTAGC TTTTGC TGTA GCAAAA TTTTTGTTTTCCTGT rpsS 875969 - 875691 - | 30S ribosomal protein S19 rplB 876815 - 875994 - | 50S ribosomal protein L2 rplW 877112 - 876816 - | 50S ribosomal protein L23 rplD 877732 - 877109 - | 50S ribosomal protein L4 TERM 670 877534 - 877544 + g 74 -3.2 -5.38249 | overlap 877527 TACCTGTACCTTTTT GCTT AAA AGGC TTTTTTGTGGTTCCT TERM 671 877774 - 877752 - R 77 -9.4 -2.9186 | opp_overlap 877752 877748 ATTTAACCTTATACA GTTATATAAA ACT TTTATATAAC TAAATTATTGCATAG TERM 672 877752 - 877774 + r 75 -9.4 -2.66602 | opp_overlap 877752, overlap 877748 ATTTAACCTTATACA GTTATATAAA ACT TTTATATAAC TAAATTATTGCATAG rplC 878489 - 877842 - | 50S ribosomal protein L3 rpsJ 878807 - 878490 - | 30S ribosomal protein S10 TERM 673 878893 - 878858 - R 100 -15.2 -4.18802 | opp_overlap 878864, overlap 878864 ATAGACATCTTAAAA TATAAATACCTATTAT TAAA ATAATAGGTATTTATA AAATCAATTAATTAT TERM 674 878887 - 878864 - R 93 -9.8 -4.45771 | opp_overlap 878864, overlap 878858 ATCTTAAAATATAAA TACCTATTAT TAAA ATAATAGGTA TTTATAAAATCAATT TERM 675 878864 - 878887 + r 91 -9.8 -3.9009 | opp_overlap 878864 878858 ATCTTAAAATATAAA TACCTATTAT TAAA ATAATAGGTA TTTATAAAATCAATT A1E_04380 880085 - 878901 - | elongation factor Tu TERM 676 879724 - 879687 - G 70 -7.1 -3.68073 | opp_overlap 879687 879698 TACTTTATTTAAGAA TACTACCATAGCAGGTA CACC TACCTGTTTTGCTAGTA ATATATGTTCTCTTG TERM 677 879687 - 879724 + g 71 -9.3 -2.51055 | opp_overlap 879687, overlap 879698 TACTTTATTTAAGAA TACTACCATAGCAGGTA CACC TACCTGTTTTGCTAGTA ATATATGTTCTCTTG TERM 678 879698 - 879713 + g 80 -7.6 -4.32436 | opp_overlap 879687, overlap 879687 AGAATACTACCATAG CAGGTA CACC TACCTG TTTTGCTAGTAATAT TERM 679 880255 - 880298 + H 100 -14.2 -2.94595 | opp_overlap 880280 TACACCCGCATTGTG GCACTGTTAATAAAATAACT TCAA AGCTATTTTGTTAGCAGTGC TATATCAACTTTATT A1E_04385 880699 - 881418 + | elongation factor Tu A1E_04390 881677 - 881778 + | hypothetical protein TERM 680 882293 - 882283 - g 84 -5.4 -5.44721 | ACTATTTTAAAAAAA TGTG CAG CACA GGTTAATCATGAGTT fumC 882124 - 883515 + | fumarate hydratase TERM 681 883547 - 883569 + F 75 -5.7 -4.63586 | opp_overlap 883547 883551, overlap 883551 CATTATATTATAATA TAGACTAGT ATTAA ACTAGTTTA TTTTGTGTATACTCT TERM 682 883551 - 883565 + F 71 -4.3 -4.85653 | opp_overlap 883547 883551, overlap 883547 ATATTATAATATAGA CTAGT ATTAA ACTAG TTTATTTTGTGTATA A1E_04400 883817 - 883996 + | hypothetical protein TERM 683 884649 - 884663 + G 70 -7.1 -3.62522 | GAGGTGGGACAGGTA CCGGT TCTGC ACCGG TTATTGCACGCATTG A1E_04405 884309 - 885667 + | cell division protein FtsZ A1E_04410 886028 - 886174 + | hypothetical protein A1E_04415 886353 - 886610 + | ecotin precursor TERM 684 886793 - 886779 - T 73 -4.3 -5.18715 | opp_overlap 886779, overlap 886774 AGAAAAATAATAAAA TTCTG TAAAT CAGAA TTTTTACTGAGTTGC A1E_04420 887435 - 886866 - | NifU-like domain-containing protein TERM 685 887557 - 887545 - R 78 -2.7 -5.9218 | GATACAACAAAAAAA TAAGT CTA ACCTA AATAAACAGCTGCAT TERM 686 888679 - 888655 - R 81 -7.4 -4.79053 | opp_overlap 888655 AAATAGTAAAATAAA CATATAAAAA ACGAG TTTTTATATG TTTTACTGGATTCAT TERM 687 888655 - 888679 + r 76 -7.4 -4.31379 | opp_overlap 888655 AAATAGTAAAATAAA CATATAAAAA ACGAG TTTTTATATG TTTTACTGGATTCAT A1E_04425 889973 - 888741 - | ATP-dependent RNA helicase RhlE TERM 688 889290 - 889307 + g 72 -2.8 -5.38054 | CCTATTATCAAGTTG TTTAGT TAATTC ACTAAA TTTTTCTTTATCAGC TERM 689 889876 - 889893 + g 100 -9.9 -4.80455 | TCCGAACCTATCATC GCAATCG GAAT CGATTGC TTTTGTATTTCAGTC TERM 690 890333 - 890348 + r 74 -9 -2.79302 | opp_overlap 890329 ATATCATTAGATTTA GGGCAT TTTC ATGCCC TCTAGTAAAAATAAT TERM 691 890422 - 890404 - R 70 -4.7 -4.75289 | TATTATAAGACAAAA CAAAATA TTTAC TATTTTG ATAAAGATGACTAGA A1E_04430 890717 - 890505 - | cold shock-like protein A1E_04435 891175 - 891044 - | hypothetical protein TERM 692 891403 - 891429 + r 95 -4.7 -6.07374 | opp_overlap 891403, overlap 891404 CACTACTTTCAAAAG TTAAAAAATTA TTTGT TAATTTTTTAG TTTTTTCTTTTTTAT TERM 693 892002 - 891972 - R 72 -4.8 -4.95211 | opp_overlap 891978 AAAAAAGTAATAAAA GCAACTCTAATACA TGG TATATTAGCTTTGC TACATATTGAGAAAT A1E_04440 892990 - 892826 - | cell division protein FtsZ TERM 694 893040 - 893030 - R 74 -6.8 -4.43911 | opp_overlap 893030 893025 AAATGGTAATTAAAA GCAG CAG CTGC TCCTATTTAAGGATA A1E_04445 893261 - 893142 - | hypothetical protein A1E_04450 893825 - 893917 + | hypothetical protein TERM 695 893967 - 893927 - T 87 -9.4 -3.89524 | gap 1, opp_overlap 893918 893927 893928, overlap 893929 ATGTGAGCTTATAAA TACGAATTTAGGATAATTA TAAT TACTTATCCTAAATTCG-A GTTATGACATTTCAC TERM 696 893927 - 893968 + T 82 -9.7 -3.39668 | opp_overlap 893927 893929, overlap 893918 893928 ATGTGAGCTTATAAA TACGAATTTAGGATAATTA TAAT TACTTATCCTAAATTCGAG TTATGACATTTCACA TERM 697 893928 - 893967 + T 84 -11 -2.6348 | opp_overlap 893927 893929, overlap 893927 893918 TGTGAGCTTATAAAT ACGAATTTAGGATAATTA TAAT TACTTATCCTAAATTCGA GTTATGACATTTCAC TERM 698 893966 - 893929 - T 100 -14.5 -3.53733 | opp_overlap 893928 893927 893918, overlap 893927 GTGAGCTTATAAATA CGAATTTAGGATAATTA TAAT TACTTATCCTAAATTCG AGTTATGACATTTCA A1E_04455 894781 - 893969 - | dimethyladenosine transferase TERM 699 894626 - 894651 + g 83 -9.7 -3.93768 | overlap 894620 894625 AGTTAACCCTCCGCT GCCGGGTCCTA TTTC TAAGACTCGGC TATTTTCTTCAAGAT A1E_04460 895790 - 894903 - | hypothetical protein TERM 700 895594 - 895608 + g 71 -8.6 -2.94293 | ATTAAGCTCTTGATT GCTAAG TCA CTTAGC TGCTTATCTTGAGCA ksgA 898184 - 896064 - | dimethyladenosine transferase TERM 701 898255 - 898240 - H 77 -4.8 -5.27779 | TTTAATAGTAAAAAA TAATAG CAAG CTATTA GTAATATATCAAATA TERM 702 898450 - 898429 - H 73 -5.2 -4.7657 | TAAAAATTTTAAAAA GACTGAAT ACCAGG ATCCAGTC ACAGTATTACAGTAA TERM 703 899075 - 899055 - g 71 -8.3 -3.34357 | overlap 899054 899068 GTACAAGGAGAAAAT TCCGGCAAT GAA ATTGCCGCA GCAATTGAAGGATTT TERM 704 899377 - 899361 - g 83 -6.7 -4.74801 | CAATCTTATGAAAAA GTATTAT TAA ATAATAC TAAACAGTTAATTAA A1E_04470 898509 - 899843 + | exodeoxyribonuclease VII large subunit TERM 705 899924 - 899912 - f 71 -4.1 -5.08824 | CCCGTAGTCAAAAAA GCCAT GGG ATGAC ATTATTAACTTTAAA A1E_04475 899951 - 900109 + | hypothetical protein TERM 706 901088 - 901098 + F 93 -5.4 -5.81622 | TGAACCTCTAAGTTT TGGT GGG ACCA TTTTTTTGCTTTTAT xseA 901389 - 902171 + | exodeoxyribonuclease VII large subunit A1E_04485 902439 - 903782 + | GTP-binding protein EngA A1E_04490 904784 - 904653 - | hypothetical protein A1E_04495 906262 - 906035 - | hypothetical protein A1E_04500 906486 - 906325 - | hypothetical protein engA 908736 - 907306 - | GTP-binding protein EngA A1E_04510 909479 - 908733 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 707 909621 - 909595 - g 74 -6 -4.73448 | ATATAGAGTTAAAAA GAGATAATTTAC GTT ATAATTTATCTC CGCTTTTAACTACTG TERM 708 909773 - 909799 + G 73 -7.5 -3.6682 | gap 1, opp_overlap 909773 909780, overlap 909779 TGCTAATTATAAAAT TCAAAAA-CACG ATCA CGTGATTTTTGA TTTAAATAACTGCGA TERM 709 909791 - 909780 - g 78 -5.8 -4.89729 | opp_overlap 909779 909773, overlap 909773 TATAAAATTCAAAAA CACG ATCA CGTG ATTTTTGATTTAAAT A1E_04515 909507 - 910328 + | formamidopyrimidine-DNA glycosidase A1E_04520 910851 - 911045 + | mannose-1-phosphate guanylyltransferase A1E_04525 912078 - 912311 + | hypothetical protein A1E_04530 913259 - 913044 - | Poly-beta-hydroxyalkanoate depolymerase ubiE 914585 - 913776 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 710 914068 - 914088 + g 76 -5.5 -5.0133 | ATATATAAGCCTATG TCTAGCA TTTTTGT TGCTAGA TTTTTTGAGGAGGTG TERM 711 914215 - 914246 + g 74 -3.8 -5.14894 | gap 1, overlap 914230 GGTATGCTTGTAGCA GATGCCGCATGTA TATGTGC TACAAGC-GCATC TTTTTGTAATTTTTT A1E_04540 916245 - 914713 - | methionyl-tRNA synthetase A1E_04545 916853 - 916242 - | thymidylate kinase TERM 712 917887 - 917913 + G 74 -5.9 -4.59109 | gap 1, overlap 917886 GACAATAAAGGTTTC TG-GATTCCCGC TTTT GCGGGAATGACA TTTTTACACGATCTC tdk 917161 - 918498 + | thymidylate kinase A1E_04555 919337 - 918495 - | prenyltransferase TERM 713 919301 - 919271 - G 84 -3.3 -5.89827 | overlap 919274 919279 AAGCAGGAAAAAAAA CTAGCAAATAAGC TACCG GCTTATCTACCCG CATTAATTTTAAAGT ubiA 919418 - 919582 + | prenyltransferase TERM 714 920342 - 920320 - f 71 -7.1 -3.74713 | opp_overlap 920320 TAAAAACTGTAATAA TTGTACAAG CACCT CTTGCACAA ATTCTAAATCTCCAT A1E_04565 920473 - 922914 + | valyl-tRNA synthetase A1E_04570 923153 - 923239 + | hypothetical protein TERM 715 923869 - 923920 + T 93 -12.2 -2.53995 | gap 1, opp_overlap 923872 923876, overlap 923872 923876 ATTATATATTACGTA TAAGAAACTTGTTTTTATAT-TATA AAA TAAACGTATAAAAACAAGTTTCTTA TAAGTTGCACTGGAT TERM 716 923872 - 923917 + T 82 -9.5 -3.42354 | gap 1, opp_overlap 923872 923876, overlap 923869 923876 ATATATTACGTATAA GAAACTTGTTTTTATAT-TATA AAA TAAACGTATAAAAACAAGTTTC TTATAAGTTGCACTG TERM 717 923930 - 923940 + T 76 -6.8 -4.57837 | overlap 923938 TTCTTATAAGTTGCA CTGG ATT CCAG TTTTTGCAAAAATGT A1E_04575 925164 - 923959 - | ATPase TERM 718 925236 - 925199 - H 100 -15.9 -3.55265 | opp_overlap 925204 925212, overlap 925204 925221 ATAAACATATTATAA GTAAATATCGAATTGGT CAAG ACCATTTCGATATTTAC AACGCAATGGTCACA TERM 719 925204 - 925231 + H 86 -10 -3.53444 | opp_overlap 925204 925199 925221, overlap 925212 CATATTATAAGTAAA TATCGAATTGGT CAAG ACCATTTCGATA TTTACAACGCAATGG TERM 720 925231 - 925204 - H 91 -10 -4.03179 | opp_overlap 925204 925212, overlap 925199 925221 CATATTATAAGTAAA TATCGAATTGGT CAAG ACCATTTCGATA TTTACAACGCAATGG TERM 721 925433 - 925423 - g 75 -2.6 -5.5604 | TGAACCAAGAAAAAA TAAA ATA TTTA CAGAAAATTGAACAA A1E_04580 925260 - 926546 + | hypothetical protein TERM 722 926602 - 926584 - f 73 -3.1 -5.54894 | opp_overlap 926584 AATTTATTAAAAAAA CTTTCCA TAGTT TGGATAG TCATATTGTTACTAT TERM 723 926765 - 926741 - g 100 -5.9 -6.17669 | opp_overlap 926744 926752, overlap 926754 AAGAAAACAAAAAAA CAATTGTTATA GAT CATAACAATTA TGAACTTATTATTGA A1E_04585 926683 - 926841 + | Alpha-(1,3)-fucosyltransferase TERM 724 927494 - 927510 + F 77 -2.3 -5.86609 | opp_overlap 927494 GATACAATAAAAATA TCAATTA TAA TTATTGA TTTTTATTTTTTTAA A1E_04590 927798 - 927899 + | hypothetical protein valS 928159 - 927950 - | valyl-tRNA synthetase TERM 725 928184 - 928209 + r 88 -9.3 -4.30978 | opp_overlap 928184 ATATTAAACAATAAA CATATAAAAAA CGAG TTTTTTATATG TTTTACTGGATTCCC TERM 726 928209 - 928184 - R 90 -9.3 -4.61162 | opp_overlap 928184 ATATTAAACAATAAA CATATAAAAAA CGAG TTTTTTATATG TTTTACTGGATTCCC A1E_04600 929537 - 928260 - | ATP-dependent protease ATP-binding subunit TERM 727 929284 - 929300 + g 71 -8.1 -3.24747 | TTATATACCGCTACT GCTAAAA TCT TTTTAGC TTGATCCTGTCCAAC A1E_04605 930218 - 929667 - | ribosomal-protein-alanine acetyltransferase A1E_04610 930898 - 930215 - | trans-regulatory protein ExsB TERM 728 931865 - 931877 + G 75 -4.9 -5.03747 | GATGCTAATCGGCGG CATTA CAT TAATG TTTTTTGAAAGCTTT TERM 729 932407 - 932390 - g 73 -4.3 -5.12474 | TACAACACATAAAAA TTATTTA GAAT TAAATAA TTACGATTCTGTATC A1E_04615 931419 - 933161 + | multidrug resistance protein A1E_04620 933404 - 933646 + | hypothetical protein TERM 730 933670 - 933705 + F 95 -10.8 -4.053 | gap 1, opp_overlap 933669 933676, overlap 933676 TTAATTTTTAAAATC GATATATGTTAGGAATC AAT GATTCTTAACAT-TATC TTTGTATCCGGTGAT TERM 731 933676 - 933700 + F 95 -10.9 -3.93742 | opp_overlap 933676 933669, overlap 933670 TTTAAAATCGATATA TGTTAGGAATC AAT GATTCTTAACA TTATCTTTGTATCCG TERM 732 933700 - 933676 - f 73 -8.7 -3.00786 | opp_overlap 933670 933676, overlap 933669 TTTAAAATCGATATA TGTTAGGAATC AAT GATTCTTAACA TTATCTTTGTATCCG TERM 733 933802 - 933758 - f 71 -7.5 -3.62275 | opp_overlap 933758 933775, overlap 933759 933775 933783 ACTCATTATTGCAAA CTTTTTTTTCAAAAAGAGTAT GTA ATACTACTTTTGAAAGAAAAA CAGTATATATCACTA TERM 734 933801 - 933759 - f 70 -8.8 -2.77043 | opp_overlap 933758 933775, overlap 933758 933775 933783 CTCATTATTGCAAAC TTTTTTTTCAAAAAGAGTAT GTA ATACTACTTTTGAAAGAAAA ACAGTATATATCACT A1E_04625 934085 - 934207 + | bicyclomycin resistance protein A1E_04630 934850 - 934662 - | hypothetical protein A1E_04635 934898 - 934999 + | hypothetical protein A1E_04640 934992 - 936239 + | hypothetical protein A1E_04645 936232 - 936897 + | lipoprotein releasing system ATP-binding protein LolD TERM 735 937530 - 937519 - g 70 -4.4 -4.88288 | TAAAATAATACAAAA TGCT AAAA AGCA AGGTGGTAGAGTAAT TERM 736 938284 - 938266 - g 74 -3.2 -5.40625 | AGATGATATAAAAAA TATATTAG AAA CAAATATA GATAAGAATAAATTT A1E_04650 936953 - 938836 + | hypothetical protein TERM 737 938925 - 938950 + F 70 -6.3 -4.20027 | opp_overlap 938914 938911, overlap 938915 938914 938911 ATGACCACAATACTT GTGATTATTAT TATA ATAATGATCGC TTTATCTGCTTTATT A1E_04655 938943 - 940184 + | hypothetical protein A1E_04660 940177 - 942177 + | cytochrome c-type biogenesis protein ccmF A1E_04665 942725 - 942597 - | hypothetical protein A1E_04670 943208 - 943101 - | hypothetical protein TERM 738 943549 - 943531 - R 100 -7.4 -6.14618 | opp_overlap 943531 TAGAAAATAAAAAAA GCCCTTTT TTA AAGAGGGC TTTTTTCGTGAGAAA TERM 739 943531 - 943549 + r 100 -9.6 -5.14563 | opp_overlap 943531 TAGAAAATAAAAAAA GCCCTTTT TTA AAGAGGGC TTTTTTCGTGAGAAA A1E_04675 948505 - 943592 - | Outer membrane protein B TERM 740 944764 - 944780 + g 72 -7.3 -3.93984 | opp_overlap 944763 CTATACCTGCAAACT GGCTATT TCC GATAGCC TTTGTAACTACATTT TERM 741 948851 - 948872 + r 74 -8.7 -3.32294 | opp_overlap 948843, overlap 948844 GCACCAAGGACTGGA TCCCGTGGT CAAG GCTACGGGA TTCCTACTCTTTATT A1E_04680 949481 - 948876 - | guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein TERM 742 949789 - 949814 + r 84 -9.3 -3.67175 | opp_overlap 949791 949793, overlap 949785 AGGAATCTAGCGCAA CATATAAAAAA CTTA TTTTTTATATG TTCATTTTAGCAAAT clpX 950827 - 949883 - | ATP-dependent protease ATP-binding subunit A1E_04690 951929 - 951048 - | lipid A biosynthesis lauroyl acyltransferase TERM 743 951763 - 951775 + gr 77 -6.3 -4.63218 | opp_overlap 951763 AATACTGCTTTAATA TTGCT TCT AGCAA TTTTATTAACGGCAA TERM 744 951910 - 951920 + gr 72 -2.6 -5.40004 | ATTAAATATCTGAGC TTTT TTA AAAA TTTTTTCATTTAATA A1E_04695 952872 - 951892 - | tetraacyldisaccharide 4'-kinase A1E_04700 953908 - 953054 - | periplasmic protein lpxK 954189 - 953872 - | tetraacyldisaccharide 4'-kinase A1E_04710 954667 - 954527 - | hypothetical protein A1E_04715 957356 - 955287 - | NAD-dependent DNA ligase LigA TERM 745 957119 - 957136 + g 74 -7.1 -4.10429 | CTTGATGTGTAACCT TAGCAAA TTTA TTTGCTA TTTTAGCCCCTACTT ligA 959982 - 957373 - | NAD-dependent DNA ligase LigA TERM 746 957678 - 957665 - G 86 -3.1 -6.20267 | GTAAAAACAAAAAAA CCTGT AGAG ACAAG GGAGTTATTAATATC tgt 961180 - 960095 - | queuine tRNA-ribosyltransferase TERM 747 961039 - 961017 - G 70 -8.4 -3.01745 | TTGCCAAGAAGTATA TCGGCACCTG TTT CAGCTACCGA TTCAGACAGCATGGC TERM 748 962610 - 962622 + r 82 -6.3 -5.0133 | opp_overlap 962609 GCTGCGTTAAATTAT GCTTT TTC AAAGC TTTTTTGGAAAACTA A1E_04750 963514 - 963392 - | Poly-beta-hydroxybutyrate polymerase TERM 749 963702 - 963723 + H 100 -9.5 -5.36314 | overlap 963693 AATTTGTCATCCCGC GACTTGATC ACGG GATCGAGTC TTTTTTAATATTTTA A1E_04755 964081 - 965580 + | ADP,ATP carrier protein A1E_04760 966930 - 966034 - | acetyl-CoA acetyltransferase TERM 750 966419 - 966437 + g 70 -3.8 -5.06816 | ACAACTATTGCGATA TGCGTTCT CTC ACGACGCA TTTTTGTTAGCAAAT TERM 751 966486 - 966499 + g 76 -5.3 -5.00616 | overlap 966480 GAGCTGCAATTATAT GCTTA CGTA TAAGC TTTTTTAAACACCCA A1E_04765 967465 - 966947 - | putative metalloprotease TERM 752 967591 - 967568 - R 90 -8.4 -4.77775 | opp_overlap 967568 ATTTGACAAAATAAA CATATAAAAA TTTG TTTTTATATG TTTTTCCTGGATTTC TERM 753 967568 - 967591 + r 90 -8.4 -4.78764 | opp_overlap 967568 ATTTGACAAAATAAA CATATAAAAA TTTG TTTTTATATG TTTTTCCTGGATTTC A1E_04770 968545 - 967655 - | lipoyl synthase TERM 754 968378 - 968389 + g 81 -4.4 -5.40072 | CGAACCTAAAATCAT CATG GTTG CATG TTTTTTTGACCAGCA A1E_04775 969800 - 968538 - | serine hydroxymethyltransferase A1E_04780 970658 - 970011 - | Serine esterase A1E_04785 971067 - 970753 - | glutaredoxin-like protein grla A1E_04790 971283 - 971912 + | endonuclease III TERM 755 971998 - 972011 + T 70 -6.7 -3.889 | TGTGCTTTGTTACAT GGCTT TAAA AAGCC TTTAATGTCATTCCC A1E_04795 972966 - 972127 - | hypothetical protein TERM 756 973279 - 973255 - g 74 -2.2 -5.52384 | overlap 973256 973257 CTCGGACGAAAAAAA CGTTTTATCC GCTAT GGATAAAATA GTAGCACGTAAAACT TERM 757 973523 - 973511 - g 73 -7.7 -3.69323 | overlap 973517 GCATTATTACCTAAA GGGAA ACA TTCCC GGAATATTAGTCAAG A1E_04800 972992 - 974110 + | ABC-type transport systems periplasmic component A1E_04805 974476 - 974312 - | twin argininte translocase protein A TERM 758 974490 - 974524 + H 71 -7.4 -3.88062 | opp_overlap 974501, overlap 974491 974494 974501 ATGATATTTTATTGT GTGAGTTAAAATCTTA TTA TAAGATTTTAACTAAA TTTAATCTAGTATAT TERM 759 974491 - 974523 + H 86 -10.9 -2.92114 | opp_overlap 974501, overlap 974490 974494 974501 TGATATTTTATTGTG TGAGTTAAAATCTTA TTA TAAGATTTTAACTAA ATTTAATCTAGTATA TERM 760 974494 - 974520 + H 100 -12.6 -2.69869 | opp_overlap 974501, overlap 974491 974490 974501 TATTTTATTGTGTGA GTTAAAATCTTA TTA TAAGATTTTAAC TAAATTTAATCTAGT glyA 974553 - 975149 + | serine hydroxymethyltransferase rplU 975220 - 975537 + | 50S ribosomal protein L21 rpmA 975562 - 975822 + | 50S ribosomal protein L27 TERM 761 976512 - 976497 - g 79 -3.4 -5.53991 | GATTTACTAAAAAAA TATTTA CAGC TAAATA CTACCCCTATAATAG A1E_04825 976119 - 977324 + | aspartate kinase A1E_04830 977627 - 978127 + | hypothetical protein A1E_04835 979665 - 978418 - | proline/betaine transporter TERM 762 979139 - 979117 - G 74 -4.1 -5.16151 | TAAACTTAACAAAAA CGGAATACG CCAAC CCCATTCCG GAAAAATATGAGAAT TERM 763 979532 - 979512 - G 71 -5.5 -4.72486 | CATAAACGGCAAAAA CATTTACAA GCT TTGTTAATG GATCAGTACCGGCTG A1E_04840 980581 - 980444 - | hypothetical protein A1E_04845 980944 - 980588 - | hypothetical protein A1E_04850 985702 - 980948 - | aspartate kinase TERM 764 981079 - 981123 + g 71 -3.1 -5.15167 | opp_overlap 981082 981086 981090, overlap 981082 981086 981090 AATTATTATTATTAT CAATCCATAAATCTAAATCAA TAG TTGTTTTAGATTTATTAATTA TTTTTATTAATAATC TERM 765 981086 - 981116 + g 87 -10 -3.78633 | opp_overlap 981086 981082 981090, overlap 981082 981079 981090 ATTATTATCAATCCA TAAATCTAAATCAA TAG TTGTTTTAGATTTA TTAATTATTTTTATT TERM 766 981116 - 981086 - G 77 -10 -2.57974 | opp_overlap 981082 981079 981086 981090, overlap 981082 981090 ATTATTATCAATCCA TAAATCTAAATCAA TAG TTGTTTTAGATTTA TTAATTATTTTTATT TERM 767 981090 - 981112 + g 74 -6.4 -4.43642 | opp_overlap 981086 981082 981090, overlap 981086 981082 981079 TTATCAATCCATAAA TCTAAATCAA TAG TTGTTTTAGA TTTATTAATTATTTT TERM 768 984268 - 984249 - G 71 -2.1 -5.46706 | AGCTTAAAATAAAAA TCTTCAC TCCAAC GTGTAGA GATACGATCTAAATC A1E_04855 985785 - 987122 + | tRNA modification GTPase TrmE TERM 769 987123 - 987172 + F 100 -13.1 -3.18264 | gap 1, opp_overlap 987123 987150 TGCATAGGGAAATGA TTTTTCTGCTGTCACCCCCGTGAT CAA GTCATGGG-GTGACAGAGGGAAAA TTGATCCATACAAGC trmE 987344 - 988708 + | tRNA modification GTPase TrmE recA 990368 - 991399 + | recombinase A fabG 991392 - 992117 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 770 992130 - 992153 + F 86 -6.2 -5.31275 | opp_overlap 992122 992130, overlap 992122 992137 992138 TAAAAATTAATAAGA TTATTTTGTG CTAG CATAAAATAA TTTTTTGTGCTAGAA acpP 992277 - 992537 + | acyl carrier protein TERM 771 992836 - 992821 - g 74 -6.2 -4.48333 | overlap 992833 ATAGACTAAGTAAAA TGGATA AATT TATCCA TTACGGAGTAGCAGC A1E_04880 992574 - 993854 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 772 994016 - 994036 + F 80 -9.9 -2.79175 | overlap 994015 994018 GTAATTTAAGTTTTG CAGATAAAA TAA TTTTATCTG ATTTAGAGCTTTGTT TERM 773 994335 - 994319 - f 79 -9.5 -3.17798 | opp_overlap 994318, overlap 994327 994328 TTACAAATTAGCGAA GTGGATA ACT TATCCAC CTATTCAGGTGGTCA TERM 774 994652 - 994633 - f 75 -3.5 -5.41359 | AACGAAATCAAAAAA GGCTTGC GGAGTT GAAAGCC GAGCTATAACACAAG TERM 775 994786 - 994765 - f 75 -7.5 -4.06182 | opp_overlap 994765 994764, overlap 994763 TTAGTTATAAAAATA CTAAAATTA TTGA TAATTTTAG CTTTCGTGTAAACAA TERM 776 995395 - 995385 - f 80 -5.4 -5.32944 | TCTATAACTAAAAAA GCTT CAA AAGC ACTACAATCAACTTC A1E_04910 995726 - 996793 + | hypothetical protein A1E_04915 996812 - 997048 + | 3-oxoacyl-(acyl carrier protein) synthase II A1E_04920 998156 - 997578 - | guanylate kinase TERM 777 998154 - 998164 + g 74 -4 -5.19275 | TTTATTTTTTGTTCT CATA TTT TATG TTTTATTTTGTAGGT A1E_04925 998400 - 998167 - | hypothetical protein A1E_04930 999793 - 998954 - | rod shape-determining protein MreC A1E_04935 1000836 - 999796 - | rod shape-determining protein MreB A1E_04940 1002020 - 1001019 - | hypothetical protein gmk 1003048 - 1002581 - | guanylate kinase TERM 778 1002957 - 1002979 + g 82 -2.6 -5.94214 | overlap 1002958 TCTTCTCCTTGATTC ACACCACTGT CAA ATTGTGGTGC TTTTTTTGTTGTATT A1E_04950 1004342 - 1003389 - | 3-oxoacyl-(acyl carrier protein) synthase III A1E_04955 1004555 - 1004355 - | 50S ribosomal protein L32 A1E_04960 1004658 - 1005131 + | hypothetical protein TERM 779 1005149 - 1005133 - f 81 -8.1 -4.28971 | opp_overlap 1005133 1005132 1005135 AGAAGAAGAGATAAA GATTAAG TAC CTTAATC GTTATGCGAATGAAC TERM 780 1005359 - 1005339 - g 80 -7.7 -4.20106 | AAAGTTTATCTAAAA CTTCTAATA AAA TATCAGAAG GTATCGACAAAATAT TERM 781 1005702 - 1005692 - g 79 -6.8 -4.61485 | CAAGGAAAAAAAATA GCAG TTG CTGC CTGCGATACTTTTAG rpmF 1005296 - 1006207 + | 50S ribosomal protein L32 TERM 782 1006679 - 1006666 - g 83 -8.1 -4.32067 | overlap 1006663 TATTCTAGAAAAGAA CGGCT ATGA AGCCG ATGACATTATCGCAA A1E_04970 1006343 - 1008970 + | DNA polymerase I A1E_04975 1012814 - 1009212 - | DNA polymerase III subunit alpha TERM 783 1012480 - 1012500 + g 72 -4.7 -4.87291 | opp_overlap 1012478 1012474 1012480 TCTTCAAAATTAATA TGATCGCAG ATC TTACGATCA TTTTTAGTTACAGTA A1E_04980 1014335 - 1013016 - | UDP-glucose 6-dehydrogenase TERM 784 1015371 - 1015358 - g 72 -2.5 -5.43487 | opp_overlap 1015358, overlap 1015351 AAATTAGATAAAAAA TTTTT AAAG AAAAA TATTTTAGTAGAAGA TERM 785 1017059 - 1017045 - g 72 -5.7 -4.42238 | CCATTGTAATCAAAA TACCG GTAGT CGGTA AAATATTTTCCAAAG A1E_04985 1014596 - 1017106 + | hypothetical protein A1E_04990 1017160 - 1018542 + | ampG protein dnaE 1018601 - 1019356 + | DNA polymerase III subunit alpha TERM 786 1020337 - 1020325 - g 79 -2.7 -5.86061 | overlap 1020326 1020336 TTGCAGCAAAAAAAA CCTAT GAT ATAGA AGTATGGCTTCCGGG A1E_05000 1019334 - 1020611 + | seryl-tRNA synthetase TERM 787 1020607 - 1020592 - f 86 -6.2 -5.252 | opp_overlap 1020591 GAGGGTTACAAAAAA TCACTA CATA TAGTGA ATAATTGTTTATTAA TERM 788 1021331 - 1021320 - g 77 -3 -5.64421 | opp_overlap 1021320 ATGGCAAAGAAAAAA TCAT TGGC ATGA TAAATTTGTTAATAC A1E_05005 1020985 - 1023417 + | Type IV secretion/conjugal transfer ATPase, VirB4 family protein TERM 789 1023454 - 1023418 - f 71 -8.1 -3.23638 | opp_overlap 1023415 1023418 1023419 1023420, overlap 1023408 1023419 TTAAATACGGACTAA TGCGAATAGCGCATTAT TAC ATAATTCGCTATTCGGT TTAAAATATAAAAGG TERM 790 1023453 - 1023419 - f 87 -11.6 -2.53701 | opp_overlap 1023418 1023415 1023419 1023420, overlap 1023408 1023418 TAAATACGGACTAAT GCGAATAGCGCATTAT TAC ATAATTCGCTATTCGG TTTAAAATATAAAAG TERM 791 1023419 - 1023453 + F 93 -11.6 -3.63627 | opp_overlap 1023408 1023419 1023418, overlap 1023418 1023415 1023420 TAAATACGGACTAAT GCGAATAGCGCATTAT TAC ATAATTCGCTATTCGG TTTAAAATATAAAAG TERM 792 1023420 - 1023452 + F 100 -15.1 -2.77962 | opp_overlap 1023408 1023419 1023418, overlap 1023418 1023415 1023419 AAATACGGACTAATG CGAATAGCGCATTAT TAC ATAATTCGCTATTCG GTTTAAAATATAAAA TERM 793 1023494 - 1023461 - f 86 -9.1 -4.08216 | opp_overlap 1023475 1023489, overlap 1023468 CTATTCGGTTTAAAA TATAAAAGGTGAAAG GTAG CTTCTACCTTTTATA TCAATAAATTATATA TERM 794 1023475 - 1023487 + F 80 -7.7 -4.55287 | opp_overlap 1023468 1023461 ATATAAAAGGTGAAA GGTAG CTT CTACC TTTTATATCAATAAA TERM 795 1023785 - 1023775 - g 79 -6.8 -4.63218 | CTCCTTGGAATAAAA GCGA CGG TCGC AATAATGATACTTGT A1E_05010 1023567 - 1027058 + | hypothetical protein A1E_05015 1027063 - 1027971 + | tellurium resistance protein TerC A1E_05020 1028015 - 1028446 + | hypothetical protein A1E_05025 1028660 - 1028737 + | hypothetical protein TERM 796 1029127 - 1029162 + G 71 -7.5 -3.53224 | overlap 1029130 1029159 1029161 TATTAGAGCTTGGTT GTGCTGCAGGCGGCA ATTTAA TACCGCATGCAGTGC TTTACCCAAAAGCTC A1E_05030 1028886 - 1030550 + | seryl-tRNA synthetase TERM 797 1030626 - 1030599 - f 100 -13.6 -3.18264 | opp_overlap 1030599 TGTTGCATGGATCAA TGTCATTTCCGC AAAA GCAGAAATGACA TTGATCCATGCAACA TERM 798 1030599 - 1030626 + F 93 -11.4 -3.18264 | opp_overlap 1030599 TGTTGCATGGATCAA TGTCATTTCCGC AAAA GCAGAAATGACA TTGATCCATGCAACA A1E_05035 1030704 - 1031321 + | NADH dehydrogenase subunit J A1E_05040 1031314 - 1031628 + | NADH dehydrogenase subunit K TERM 799 1032892 - 1032915 + G 70 -6.1 -4.20516 | gap 1, opp_overlap 1032894 TGTTTATTTTTGGAA TAGCAG-CAG CAATA CTGACTGCTA TTTATTCAATGAAAA A1E_05045 1031631 - 1033616 + | NADH dehydrogenase subunit L TERM 800 1033629 - 1033613 - f 80 -8.1 -4.07885 | opp_overlap 1033613 TACTTTCTTTCAAAA GTAGTAT TGC ATACTAC TTTTGAAAAAAGAAT TERM 801 1033613 - 1033629 + F 80 -8.1 -4.07687 | opp_overlap 1033613 TACTTTCTTTCAAAA GTAGTAT TGC ATACTAC TTTTGAAAAAAGAAT TERM 802 1033689 - 1033662 - f 74 -8.6 -3.2056 | opp_overlap 1033654 1033654 1033666, overlap 1033666 AGCTATATTGAGTAA TAAAGATGAAAG GTGA CTTCCATCTTCA TTACCAAATTAATTT TERM 803 1033685 - 1033666 - f 76 -7.2 -4.26202 | opp_overlap 1033666 1033654 1033654, overlap 1033662 ATATTGAGTAATAAA GATGAAAG GTGA CTTCCATC TTCATTACCAAATTA A1E_05050 1033753 - 1035234 + | NADH dehydrogenase subunit M TERM 804 1035742 - 1035754 + G 71 -7.7 -3.56821 | AATTCTGCAAAATTG GCTTG TAT CAAGC TTTACGAAATATGCT A1E_05055 1035446 - 1036159 + | cytochrome c biogenesis protein CcmA A1E_05060 1036293 - 1036156 - | hypothetical protein TERM 805 1036295 - 1036274 - G 78 -8.9 -3.50447 | opp_overlap 1036274 1036277, overlap 1036277 GTAACTTCCATATAA GAATGAATA TATA TATTCATTC TTATCACTAATGCTC TERM 806 1036274 - 1036295 + g 78 -8.9 -3.38272 | opp_overlap 1036274 1036277, overlap 1036277 GTAACTTCCATATAA GAATGAATA TATA TATTCATTC TTATCACTAATGCTC TERM 807 1036788 - 1036750 - g 80 -10.7 -2.69977 | overlap 1036747 ATATCTTATATAGCA TGTATCTTTTTTCTT TTTCTAACC AAGAAAAAAGATACA CATTAGAAGCAGATA A1E_05065 1036597 - 1036794 + | NADH dehydrogenase subunit M A1E_05070 1037831 - 1037352 - | NADH dehydrogenase subunit I TERM 808 1037709 - 1037719 + g 77 -4.6 -5.14965 | overlap 1037703 ACCCTTAAACCTTGG GCTC ACA GGGC TTTTTTCATAAGGAT A1E_05075 1038147 - 1037983 - | hypothetical protein A1E_05080 1039388 - 1038369 - | NADH dehydrogenase subunit H TERM 809 1038608 - 1038592 - G 72 -5.8 -4.40237 | CACGAGATATTAAAA GGCGGT AAATA ACCACC TAAAAAGAAAGTAGT A1E_05085 1041660 - 1039630 - | NADH dehydrogenase subunit G TERM 810 1039935 - 1039958 + g 77 -3.8 -5.38321 | TTGCTATATCTTCTT TAGCATCTCC TACA GGCGATACTA TTTTTTCTGCTATTT A1E_05090 1042189 - 1041833 - | NADH dehydrogenase subunit G TERM 811 1042257 - 1042272 + r 70 -6.2 -4.12901 | TTACCTAAATCTTTC CAATCA GGAT TGATTG TTTCTATGAATTTTA A1E_05095 1045192 - 1042559 - | aconitate hydratase TERM 812 1042655 - 1042667 + g 79 -3.3 -5.61277 | TATTAAATCTATTGT CTGAG TCG CTCCG TTTTGTTTTTTTATC TERM 813 1042843 - 1042821 - G 72 -7.1 -3.78022 | CCCATACCTACTAAA TTTGAACGA TGTAT TCGCTCAAA ACTCTCAGCAATCAC TERM 814 1045227 - 1045243 + r 71 -8.7 -2.90392 | overlap 1045229 TCATTATTTGGTACT TAGTGGC ATT GCCGCTA TGTCATTGCCACGTA atpC 1045655 - 1045341 - | F0F1 ATP synthase subunit epsilon A1E_05105 1047169 - 1045748 - | F0F1 ATP synthase subunit beta A1E_05110 1048143 - 1047277 - | F0F1 ATP synthase subunit gamma A1E_05115 1049789 - 1048251 - | F0F1 ATP synthase subunit alpha TERM 815 1048932 - 1048896 - G 72 -3.5 -5.13741 | opp_overlap 1048898 1048899, overlap 1048898 1048899 TGAATGCAAGAAAAA TATGTCACCTGGGTAAG CTT CTCGCCCAGGCGGCCTT CTAAGTAATAATGAG TERM 816 1048930 - 1048898 - G 70 -6.1 -4.18817 | opp_overlap 1048898 1048899, overlap 1048896 1048899 AATGCAAGAAAAATA TGTCACCTGGGTAAG CTT CTCGCCCAGGCGGCC TTCTAAGTAATAATG TERM 817 1048899 - 1048929 + g 74 -9.6 -2.62642 | opp_overlap 1048898 1048896 1048899, overlap 1048898 ATGCAAGAAAAATAT GTCACCTGGGTAAG CTT CTCGCCCAGGCGGC CTTCTAAGTAATAAT TERM 818 1048929 - 1048899 - G 76 -9.6 -3.09664 | opp_overlap 1048899 1048898, overlap 1048898 1048896 ATGCAAGAAAAATAT GTCACCTGGGTAAG CTT CTCGCCCAGGCGGC CTTCTAAGTAATAAT TERM 819 1049093 - 1049071 - G 87 -12 -2.78058 | overlap 1049068 ATGAATTGAAGAGCA GCAGCTTCTG ATG CAGTAGCTGC AATAACAATTGTATA TERM 820 1049252 - 1049263 + g 80 -7.2 -4.72486 | TAATAATAGTATCGA CGGC TATA GCCG TTTTTCCAGTTTGTC A1E_05120 1050558 - 1049914 - | F0F1 ATP synthase subunit delta TERM 821 1050411 - 1050437 + g 83 -11 -2.93878 | opp_overlap 1050411, overlap 1050407 CCTGAATATTATCAA CCATAGCATTAT TAA ATAAAGCTATGG TATAATTCCCTATTA TERM 822 1050437 - 1050411 - G 85 -11 -3.27923 | opp_overlap 1050411 1050407 CCTGAATATTATCAA CCATAGCATTAT TAA ATAAAGCTATGG TATAATTCCCTATTA TERM 823 1050568 - 1050531 - G 80 -6.5 -4.88405 | overlap 1050532 AAGTTTTAAATAAAA GGTATTTGATATGAAAA GTGG TTTCCATCTCAAATACA AAATTAATTTATGTT TERM 824 1050567 - 1050532 - G 84 -10 -3.51958 | overlap 1050531 AGTTTTAAATAAAAG GTATTTGATATGAAAA GTGG TTTCCATCTCAAATAC AAAATTAATTTATGT A1E_05125 1052009 - 1050621 - | dihydrolipoamide dehydrogenase TERM 825 1052156 - 1052144 - R 76 -9.1 -3.12256 | overlap 1052143 ATCTATTTAACAAAG CCCTG TCC CAGGG GAATAACATAAGCAA A1E_05130 1052801 - 1052682 - | hypothetical protein A1E_05135 1055788 - 1053416 - | 1A family penicillin-binding protein A1E_05140 1057297 - 1055957 - | hypothetical protein A1E_05145 1057840 - 1057658 - | hypothetical protein A1E_05150 1058014 - 1057937 - | hypothetical protein TERM 826 1058401 - 1058355 - H 70 -8.4 -2.50816 | opp_overlap 1058354 1058356 1058369, overlap 1058326 1058369 TCGTGACGTATTAAT TTTATCCATGTAAATTTAACAT AAA ATGTTAAATTTGCATAAATAAT GATTTAGCATTTTTT TERM 827 1058356 - 1058400 + H 78 -9.7 -2.97543 | opp_overlap 1058326 1058355 1058369, overlap 1058354 1058369 CGTGACGTATTAATT TTATCCATGTAAATTTAACAT AAA ATGTTAAATTTGCATAAATAA TGATTTAGCATTTTT TERM 828 1058387 - 1058369 - H 71 -7.6 -3.6682 | opp_overlap 1058356 1058354 1058369, overlap 1058355 TTTTATCCATGTAAA TTTAACAT AAA ATGTTAAA TTTGCATAAATAATG TERM 829 1058369 - 1058387 + H 71 -7.6 -3.67296 | opp_overlap 1058369 1058355, overlap 1058356 1058354 TTTTATCCATGTAAA TTTAACAT AAA ATGTTAAA TTTGCATAAATAATG A1E_05155 1058486 - 1058809 + | hypothetical protein A1E_05160 1058809 - 1059030 + | AAA family ATPase A1E_05165 1059946 - 1059845 - | hypothetical protein A1E_05170 1060114 - 1059983 - | hypothetical protein A1E_05175 1060696 - 1060217 - | hypothetical protein A1E_05180 1062416 - 1060689 - | glutathione-regulated potassium-efflux system protein kefb (kefb) TERM 830 1062262 - 1062274 + g 76 -6.3 -4.58663 | AGTAACTTAGTTTGA TCGTA TGT TACGA TTTTTAAACCGTGAT A1E_05185 1062739 - 1062413 - | Iojap-related protein A1E_05190 1062898 - 1063149 + | hypothetical protein A1E_05195 1063675 - 1063487 - | hypothetical protein A1E_05200 1064090 - 1063917 - | hypothetical protein TERM 831 1064749 - 1064766 + r 72 -7 -3.9461 | overlap 1064758 GGTAGGAGTTGCCCC GATCCC ATATAA GGGATC TTATTATTACCAAGA A1E_05205 1065220 - 1065107 - | hypothetical protein A1E_05210 1066175 - 1066056 - | hypothetical protein A1E_05215 1066288 - 1066175 - | hypothetical protein TERM 832 1066215 - 1066227 + g 77 -7.7 -3.9644 | opp_overlap 1066204 ACTACGCTACCATTA GTACC GCC GGTAC TTGTTATATTACCCG A1E_05220 1066466 - 1066266 - | cell surface antigen-like protein Sca13 A1E_05225 1067230 - 1067129 - | hypothetical protein A1E_05230 1067519 - 1067331 - | dihydrolipoamide dehydrogenase TERM 833 1068356 - 1068372 + H 74 -5.1 -5.02074 | opp_overlap 1068356 AACAAATATAAATAT TCTGCAT TGC AGGCAGA TTTTTTGAAAACTAC TERM 834 1068667 - 1068641 - H 77 -9.6 -2.90486 | opp_overlap 1068641 1068646, overlap 1068646 AAGAATTTTTACATA TAAAAGGTAACT ATA AGTTACCTTTTC TTATTTAGAATAAAT TERM 835 1068641 - 1068667 + H 87 -9.6 -3.94188 | opp_overlap 1068641 1068646, overlap 1068646 AAGAATTTTTACATA TAAAAGGTAACT ATA AGTTACCTTTTC TTATTTAGAATAAAT TERM 836 1068646 - 1068662 + H 100 -9.5 -5.00196 | opp_overlap 1068641 1068646, overlap 1068641 TTTTTACATATAAAA GGTAACT ATA AGTTACC TTTTCTTATTTAGAA TERM 837 1068662 - 1068646 - H 90 -9.5 -4.60797 | opp_overlap 1068646 1068641, overlap 1068641 TTTTTACATATAAAA GGTAACT ATA AGTTACC TTTTCTTATTTAGAA TERM 838 1068906 - 1068889 - H 80 -9.9 -2.78935 | ATATGTGTTACTAGA TTCCTGC TTCC GCAGGAA TAACATAATGACACT infA 1069123 - 1069338 + | translation initiation factor IF-1 A1E_05240 1069351 - 1069959 + | Maf-like protein A1E_05245 1070528 - 1070097 - | Maf-like protein A1E_05250 1071551 - 1070634 - | site-specific tyrosine recombinase XerC TERM 839 1071128 - 1071104 - G 82 -8.7 -4.0847 | CATATATAAGAACAA GTAGAGCTT TATTTCT AAGCTCTAC CCACTTAACATTCCC TERM 840 1071787 - 1071845 + r 100 -13.1 -3.47078 | gap 2, opp_overlap 1071787 ACTGTCATACCACAA CTTGATCGATGTATC-TTT-TAAGGTA TACTAAC TACTTTACAAAAGATACATCGATCAAG TTGTAGTATGACATG TERM 841 1071845 - 1071787 - R 90 -10.9 -3.4678 | gap 2, opp_overlap 1071787 ACTGTCATACCACAA CTTGATCGATGTATC-TTT-TAAGGTA TACTAAC TACTTTACAAAAGATACATCGATCAAG TTGTAGTATGACATG A1E_05255 1072476 - 1071874 - | phospholipase D (PLD) superfamily protein TERM 842 1072407 - 1072391 - G 74 -6.6 -4.28045 | AGATTAGTAAAATAA TCTGGA TTCTG TCCAGA AATACCTAAAGCAAC TERM 843 1072585 - 1072548 - R 100 -12.9 -3.05384 | opp_overlap 1072547 1072548 CTTTGTTGCATGGAA CCCGATGTCATTCCTGT CTTT ACAGGAATGACATAAAG AGTATTTACCGATCC A1E_05260 1076027 - 1074399 - | UbiD family decarboxylase TERM 844 1076018 - 1076034 + g 91 -4.5 -6.02919 | opp_overlap 1075996 1075995 ATTCCAGTAAATTTT TAAAGCT CAT AGTTTTA TTTTTTTATTTATAA TERM 845 1076207 - 1076190 - R 73 -7.7 -3.84719 | ATGGCGAAAGCTAAA TTCCCAC GAAA GCGGGAA TAACATTATAGACAC A1E_05265 1077803 - 1076229 - | parvulin-like peptidyl-prolyl isomerase TERM 846 1076315 - 1076325 + g 75 -2.6 -5.66684 | overlap 1076309 CAGAATTTTTAATAT TATA TAT TATA TTTTTTTCTGAATTG TERM 847 1077996 - 1077972 - R 100 -10.9 -5.75822 | opp_overlap 1077972 TATAAAGCAAAAAAA CCTATATAGTC AAA AACTATATAGG TTTTTCTGTAATATA TERM 848 1077972 - 1077996 + r 100 -10.2 -5.02502 | opp_overlap 1077972 TATAAAGCAAAAAAA CCTATATAGT CAAAA ACTATATAGG TTTTTCTGTAATATA A1E_05270 1084679 - 1078023 - | 190-kDa cell surface antigen TERM 849 1079678 - 1079659 - G 71 -7.8 -3.41414 | opp_overlap 1079656 1079654 1079652 1079659 AAATTATAGGTAGAA CCTGTGAC TAAA GTCACTGG TCCTGTATTAGTAAA A1E_05275 1087386 - 1085152 - | cell division protein FtsK-like protein TERM 850 1086902 - 1086887 - G 72 -4.8 -4.90079 | opp_overlap 1086887 AGCTTAATAATAAAA TTACTT AAAG AAGTAA ATTGTATTTCAAGTA A1E_05280 1087995 - 1087621 - | hypothetical protein xerC 1088355 - 1088089 - | site-specific tyrosine recombinase XerC TERM 851 1088979 - 1088960 - g 70 -7.2 -3.65902 | opp_overlap 1088960 GGCATGCTATTCAAA GCTATGCT GAGA AGCATAAC TATTCGGTAGTGAGA A1E_05290 1088503 - 1089288 + | methionine aminopeptidase TERM 852 1089510 - 1089486 - f 100 -12.9 -2.94925 | ATACCTCATTATATA GGTCGACCAAT TAG ATAGGTCGACC ATAAAAGAGTAAAAG A1E_05295 1089786 - 1089911 + | hypothetical protein TERM 853 1090251 - 1090237 - g 74 -7.8 -3.77808 | opp_overlap 1090236 CTCATGATAAGATAA CACCAC GCG GTGGCG GTCTTGCGATTGTAA TERM 854 1090472 - 1090489 + G 72 -7.1 -3.85296 | opp_overlap 1090488, overlap 1090471 1090488 ACAGGTAAACTCCGT GCATATA ATAA TATATGC TATTTTAGTTATAGC A1E_05300 1090098 - 1091081 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase A1E_05305 1091078 - 1091395 + | hypothetical protein TERM 855 1091399 - 1091389 - T 76 -6.8 -4.48987 | opp_overlap 1091388 1091384 GTTCTATAAGCAAAA GCCT TAG AGGC GTCTGTCTCTGTAAA TERM 856 1091420 - 1091436 + T 75 -5.3 -4.86226 | TCTCTGTAAAGTTAT TTTAATT GAT AATTAAA TTCTTTTTTTGCTAT A1E_05310 1091955 - 1091857 - | hypothetical protein TERM 857 1092084 - 1092042 - R 77 -7.9 -4.09685 | gap 1, overlap 1092043 GCGTAGTTCTTAAAA GTGGTTAATGTCATTCCTGC AAAA GCAGGAATGACAC-AACAAA GTCAAAGTACATAAA TERM 858 1092083 - 1092043 - R 91 -11.4 -3.05597 | gap 1, overlap 1092042 CGTAGTTCTTAAAAG TGGTTAATGTCATTCCTGC AAAA GCAGGAATGACAC-AACAA AGTCAAAGTACATAA TERM 859 1092142 - 1092096 - R 100 -15.7 -3.04853 | gap 1, opp_overlap 1092107, overlap 1092107 CAAAGTCAAAGTACA TAA-ACAAAAAAGGAGTCTTTA AAAT TAAAGACTCCTTTTTCGTGTTA ATAGCTTGTAAAAAG TERM 860 1092130 - 1092107 - R 100 -12.6 -5.76237 | opp_overlap 1092107, overlap 1092096 TACATAAACAAAAAA GGAGTCTTTA AAAT TAAAGACTCC TTTTTCGTGTTAATA TERM 861 1092107 - 1092130 + r 100 -12.6 -4.89233 | opp_overlap 1092107 1092096 TACATAAACAAAAAA GGAGTCTTTA AAAT TAAAGACTCC TTTTTCGTGTTAATA A1E_05315 1092914 - 1092171 - | outer surface protein TERM 862 1093092 - 1093060 - R 78 -9.5 -3.06183 | opp_overlap 1093060 1093061 1093067, overlap 1093067 TGTAGCGGGATCGAA CTTAAAATACTAATA TAA TACTAGTATTTTAAA TTATTCTTTTGGATA TERM 863 1093061 - 1093091 + r 73 -8.6 -3.124 | opp_overlap 1093060 1093067, overlap 1093060 1093067 GTAGCGGGATCGAAC TTAAAATACTAATA TAA TACTAGTATTTTAA ATTATTCTTTTGGAT A1E_05320 1093845 - 1093171 - | putative outer surface protein A1E_05325 1094454 - 1094110 - | ferredoxin A1E_05330 1095148 - 1094459 - | Heme exporter protein C A1E_05335 1095810 - 1095208 - | cytosine deaminase A1E_05340 1096696 - 1095791 - | cation diffusion facilitator family transporter TERM 864 1096762 - 1096740 - H 74 -5 -5.09762 | opp_overlap 1096739 1096740 1096742 GTTTAACAAAGAAAA TATAAAATTC AAT GAGTTTTATA CTTTACAAAATTCTA A1E_05345 1096826 - 1097305 + | 17 kDa surface antigen precursor TERM 865 1097411 - 1097401 - f 91 -6.8 -5.39721 | opp_overlap 1097400 1097401 GGATGATACAAAAAA CTGG ATT CCAG CTTTCGCGGGAATAA A1E_05350 1097458 - 1097916 + | hypothetical protein A1E_05355 1097921 - 1098622 + | methionine aminopeptidase uvrA 1101486 - 1098625 - | excinuclease ABC subunit A TERM 866 1100084 - 1100098 + g 81 -4.3 -5.43974 | TTAAGTATACGCTCG GCAAT AAATA ATTGC TTTTTATTTAATTTT TERM 867 1101520 - 1101551 + H 71 -4.6 -4.90079 | opp_overlap 1101516 1101517 1101528, overlap 1101528 TTTTTTGAGAATTTT TAAAAAAACCTATA GTAT TATAGGCTCTTTTA TTTTATTATTGCAAT TERM 868 1101543 - 1101528 - H 89 -6.2 -5.43866 | opp_overlap 1101528 1101520 GAATTTTTAAAAAAA CCTATA GTAT TATAGG CTCTTTTATTTTATT A1E_05365 1101595 - 1102053 + | single-strand DNA-binding protein A1E_05370 1102065 - 1102916 + | single-strand DNA-binding protein A1E_05375 1103306 - 1103467 + | hypothetical protein TERM 869 1104144 - 1104088 - g 100 -14.1 -3.56325 | opp_overlap 1104100 1104131, overlap 1104100 GTTCTACAACTACAA TTCTTCTTCAAATCAGGCTTTACTTAA TCT TAAAGTAAAGCCTGATTCTAAACAGAA TCTAATTAGCGATTT TERM 870 1104132 - 1104100 - g 100 -15.1 -3.53761 | opp_overlap 1104100 1104131, overlap 1104088 CAATTCTTCTTCAAA TCAGGCTTTACTTAA TCT TAAAGTAAAGCCTGA TTCTAAACAGAATCT TERM 871 1104100 - 1104132 + G 100 -15.1 -3.29263 | opp_overlap 1104088 1104100, overlap 1104131 CAATTCTTCTTCAAA TCAGGCTTTACTTAA TCT TAAAGTAAAGCCTGA TTCTAAACAGAATCT A1E_05380 1104065 - 1104382 + | hypothetical protein TERM 872 1106162 - 1106131 - g 83 -5.9 -5.15381 | opp_overlap 1106138 AAGATATCCAAAAAA CTTACTTCAAGCC CTGCTT GTCTTGCAGTAAG CGAATCTGCTATGGA A1E_05385 1104562 - 1106433 + | heat shock protein 90 TERM 873 1106513 - 1106533 + F 71 -4.1 -5.03994 | CACAGGATCTAGTAG CAATAATAA TAT TTTTTATTG TTTTTATATATACCG TERM 874 1106869 - 1106888 + G 77 -8.6 -3.68222 | opp_overlap 1106868 CGGAACACGTAATAT TGGCGGTA ATCA TACTGCCA TTCTTGAACTTGAAA A1E_05390 1106624 - 1107814 + | 5-aminolevulinate synthase TERM 875 1107915 - 1107903 - f 79 -4.9 -5.45802 | CCTGTAAAATAAAAA TTTGT GAT ACAAA TATCAACTTGGAAAA TERM 876 1108246 - 1108260 + G 79 -8.6 -3.85389 | TAGCAGGTTTTAGAG CTGGTA AAG TACCAG TTTCAATTGTTAAGA TERM 877 1108798 - 1108772 - g 77 -7.5 -4.07885 | gap 1 TACTTTTCCTGAAAA TTACCATGCTAA AGAT TTAGCA-GGTAA AGATGCTCGTTTTGT tig 1108110 - 1109438 + | trigger factor obgE 1110643 - 1109651 - | GTPase ObgE A1E_05405 1112288 - 1110978 - | type II citrate synthase TERM 878 1111037 - 1111048 + g 71 -2.2 -5.45652 | CGGTATAAAGCTGTC TCGG TCTA CTGA TTTTTTGTTCAGGGT TERM 879 1111916 - 1111949 + g 91 -7.5 -5.16237 | opp_overlap 1111915 1111916 1111919 TTTGAAACAGATAAT GTAGTCGTTCATTCA CTAA TGAATGAACAGCGAC TTTTTTAGTAAAATT TERM 880 1112194 - 1112222 + g 77 -8.3 -3.88464 | overlap 1112197 ATATCAATTACATCC TCACCTATACTTG CTT TAAGTATAGGTAA TTTAAATATTTTTCC TERM 881 1112197 - 1112219 + g 81 -10 -2.99074 | overlap 1112194 TCAATTACATCCTCA CCTATACTTG CTT TAAGTATAGG TAATTTAAATATTTT A1E_05410 1112792 - 1112613 - | transcriptional regulator A1E_05415 1113311 - 1113243 - | hypothetical protein TERM 882 1113339 - 1113359 + r 75 -7.6 -4.07246 | overlap 1113334 TTTTTCATTATCATG TGCCGTGA CTTGA TCATGGCA TTTAGTTTAAAATGC A1E_05420 1114377 - 1113589 - | N-terminus of bacteriophage-type DNA polymerase gltA 1114394 - 1115371 + | type II citrate synthase A1E_05430 1115466 - 1116437 + | tRNA (guanine-N(7)-)-methyltransferase TERM 883 1116956 - 1116930 - T 71 -2.5 -5.4182 | gap 1 AATTATAAATAAAAA TGATTATC-TAA AACC TCATGATAATCA TATAATTACCAAATA A1E_05435 1117948 - 1117010 - | bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase TERM 884 1117404 - 1117388 - G 74 -7.3 -4.04318 | overlap 1117389 TTCAGACATTATAAA CCCTTCT CTA AGAAGAG TAGGAGTAGCGGTTG glyS 1120120 - 1118117 - | glycyl-tRNA synthetase subunit beta TERM 885 1120139 - 1120151 + r 70 -4.9 -4.7497 | TTCATCTCCAACCAT TTTGT GCA ACAAA TTTTTGCTAAATGAC A1E_05445 1120983 - 1120117 - | glycyl-tRNA synthetase subunit alpha TERM 886 1120216 - 1120237 + g 71 -8.9 -2.57013 | opp_overlap 1120207 ACTAATCACCCCAAG TGCATTTAA TTGA TTAAATGCA TGACTTGCCTTAAGG A1E_05450 1121780 - 1121151 - | hypothetical protein A1E_05465 1122941 - 1122852 - | hypothetical protein A1E_05470 1124078 - 1123125 - | hypothetical protein A1E_05475 1124599 - 1124087 - | hypothetical protein glyQ 1126460 - 1124889 - | glycyl-tRNA synthetase subunit alpha TERM 887 1126357 - 1126378 + g 71 -3.1 -5.1417 | opp_overlap 1126357, overlap 1126359 AGTAACACCACAATA TTTTTTCTT TTGA AAGAAAATA TTTTTAATTTTGTAG TERM 888 1126558 - 1126506 - H 80 -6 -5.11836 | gap 1, opp_overlap 1126509 1126512 1126515, overlap 1126512 1126516 ATAGTCAAAATAAAA CATAAATTAATATTAGAGATAGGAA CTGC TTCCCATCTCTAATACTCA-TTATT TTAAACTTCTTTTAA TERM 889 1126509 - 1126556 + H 70 -5.8 -4.26634 | opp_overlap 1126506 1126512 1126516, overlap 1126512 1126515 GTCAAAATAAAACAT AAATTAATATTAGAGATAGGAA CTGC TTCCCATCTCTAATACTCATTA TTTTAAACTTCTTTT TERM 890 1126553 - 1126512 - H 100 -11.9 -4.61807 | opp_overlap 1126509 1126512 1126515, overlap 1126506 1126516 AAAATAAAACATAAA TTAATATTAGAGATAGGAA CTGC TTCCCATCTCTAATACTCA TTATTTTAAACTTCT TERM 891 1126512 - 1126553 + H 77 -7.5 -4.22535 | opp_overlap 1126512 1126506 1126516, overlap 1126509 1126515 AAAATAAAACATAAA TTAATATTAGAGATAGGAA CTGC TTCCCATCTCTAATACTCA TTATTTTAAACTTCT TERM 892 1126515 - 1126550 + H 76 -9.2 -3.10981 | opp_overlap 1126512 1126506 1126516, overlap 1126512 1126509 ATAAAACATAAATTA ATATTAGAGATAGGAA CTGC TTCCCATCTCTAATAC TCATTATTTTAAACT TERM 893 1126549 - 1126516 - H 100 -14.9 -3.75031 | opp_overlap 1126515 1126512 1126509, overlap 1126512 1126506 TAAAACATAAATTAA TATTAGAGATAGGAA CTGC TTCCCATCTCTAATA CTCATTATTTTAAAC alaS 1126618 - 1129254 + | alanyl-tRNA synthetase TERM 894 1129344 - 1129362 + T 76 -8.8 -3.53444 | opp_overlap 1129337 CGTACACATTGTTAT GTCGGCTG ACA CAGCGGAC TTTACCAAGCCATGC truA 1130212 - 1129475 - | tRNA pseudouridine synthase A A1E_05495 1132176 - 1130269 - | RNA polymerase sigma factor RpoD A1E_05500 1134134 - 1132350 - | DNA primase TERM 895 1132849 - 1132874 + g 75 -2.7 -5.65678 | opp_overlap 1132855, overlap 1132855 CTTGAAATTATAGGA GTTAAATTTAA ACTT TTAGTTTTAAC TTTTTTCTGTTTTAT TERM 896 1134069 - 1134096 + g 70 -6.5 -4.16016 | gap 1 TAAAACTACTTTTTG CCGTATT-ACAT CAGAT ATGTTAATACGG TTTCTTAAGAACTCA dnaG 1134752 - 1134138 - | DNA primase TERM 897 1134896 - 1134920 + H 76 -7.4 -4.30978 | opp_overlap 1134896 ATTTGGTAAAATAAA CATATAAAAA ACAAG TTTTTATATG TTTTACTGGATTCCC TERM 898 1134920 - 1134896 - H 81 -7.4 -4.65263 | opp_overlap 1134896 ATTTGGTAAAATAAA CATATAAAAA ACAAG TTTTTATATG TTTTACTGGATTCCC A1E_05510 1135131 - 1135619 + | transcription elongation factor GreA A1E_05515 1136195 - 1135914 - | NAD(P) transhydrogenase subunit alpha TERM 899 1136349 - 1136329 - R 76 -4.2 -5.54907 | opp_overlap 1136329 TTGATAAAATAAAAA TATAAAAA ACAAG TTTTTATA TGTTTTACTAGATTA A1E_05520 1136452 - 1136357 - | hypothetical protein TERM 900 1136865 - 1136853 - H 72 -6.3 -4.44046 | opp_overlap 1136853 1136852 CTCAGGTGAAACAAA CTTAG CTC CTAAG CTTTCTACCTGCTCT TERM 901 1138042 - 1138030 - g 74 -6.3 -4.5123 | opp_overlap 1138029 AAGCTACTAAACAAA TTGAG CTA CTCAA AATATTTGAAAATAA greA 1137567 - 1138208 + | transcription elongation factor GreA A1E_05545 1138528 - 1140162 + | DNA polymerase III subunits gamma and tau A1E_05550 1140174 - 1140497 + | hypothetical protein TERM 902 1140549 - 1140574 + T 90 -11.1 -3.56161 | overlap 1140551 1140552 ATCTAGATTTGTTGT CATCCCGTGGC TCTT GCCACGGGGTC TTGTATCCTACATTG TERM 903 1140551 - 1140572 + T 100 -13.7 -3.3517 | overlap 1140549 1140552 CTAGATTTGTTGTCA TCCCGTGGC TCTT GCCACGGGG TCTTGTATCCTACAT TERM 904 1140552 - 1140571 + T 100 -15 -2.6062 | overlap 1140551 1140549 TAGATTTGTTGTCAT CCCGTGGC TCTT GCCACGGG GTCTTGTATCCTACA A1E_05555 1141412 - 1140717 - | hypothetical protein TERM 905 1141551 - 1141522 - R 81 -3.1 -5.86332 | gap 1, opp_overlap 1141524 1141530, overlap 1141530 GCAATCCAAAAAAAA TTAAAAAATGCTAA TCT TTAGCAT-TTTTAT TTTTCCTTGCTTCTT TERM 906 1141524 - 1141550 + r 91 -8.2 -4.9445 | opp_overlap 1141522 1141530, overlap 1141530 AATCCAAAAAAAATT AAAAAATGCTAA TCT TTAGCATTTTTA TTTTTCCTTGCTTCT TERM 907 1141530 - 1141544 + r 100 -7.2 -5.67529 | opp_overlap 1141522 1141530, overlap 1141524 AAAAAAATTAAAAAA TGCTAA TCT TTAGCA TTTTTATTTTTCCTT TERM 908 1141544 - 1141530 - R 100 -7.2 -5.62552 | opp_overlap 1141530 1141524, overlap 1141522 AAAAAAATTAAAAAA TGCTAA TCT TTAGCA TTTTTATTTTTCCTT TERM 909 1141570 - 1141580 + r 71 -4 -5.10461 | TCCTTGCTTCTTCAA TTAC TTC GTAA TTTTTCTTAGCTCAG TERM 910 1141636 - 1141671 + r 78 -8.5 -3.71981 | opp_overlap 1141644, overlap 1141644 CAATAAATTAAATTT GTGTTAAAGGTGGAA GCTGCG TTTCACCTTTGATAC TCTTTATTGACTCTT TERM 911 1141683 - 1141720 + r 100 -18.9 -3.76952 | opp_overlap 1141719 ATACTCTTTATTGAC TCTTCTCTATGAAAAAA TACA TTTTTTCATAGAGAAGA TTTACATTAAATCAC A1E_05560 1142444 - 1141722 - | glutamine ABC transporter ATP-binding protein TERM 912 1141800 - 1141788 - G 76 -3.3 -5.4505 | opp_overlap 1141788 CGGTTTAATAAAAAA GTCTG GTG CAGCC TGATTTGCTAAAATC A1E_05565 1143212 - 1142448 - | hypothetical protein A1E_05570 1143224 - 1143910 + | hypothetical protein TERM 913 1143928 - 1143904 - f 71 -4.5 -4.95896 | opp_overlap 1143904 1143906, overlap 1143906 AGAAATCCAGAAAAA CATATAAAAAA TTG TTTTTTATATT GTTTATTTTATCAAA TERM 914 1143906 - 1143926 + F 78 -7.1 -4.48317 | opp_overlap 1143906 1143904, overlap 1143904 AAATCCAGAAAAACA TATAAAAAA TTG TTTTTTATA TTGTTTATTTTATCA TERM 915 1143926 - 1143906 - f 75 -7.1 -4.08693 | opp_overlap 1143904 1143906, overlap 1143904 AAATCCAGAAAAACA TATAAAAAA TTG TTTTTTATA TTGTTTATTTTATCA TERM 916 1144242 - 1144262 + G 72 -9.1 -2.75311 | overlap 1144241 1144238 TATTTATTCTATTAC CGGTAATAA CGG TTATTGCCG TAATCTATATCTATA TERM 917 1144339 - 1144353 + G 71 -7 -4.13648 | opp_overlap 1144337 AGTTCACAACGTACA GCTGGC ATT GCCTGC TTTGTATGTAGCATT A1E_05575 1144049 - 1145131 + | hypothetical protein A1E_05580 1145598 - 1145134 - | DNA polymerase III subunit chi A1E_05585 1147035 - 1145881 - | succinyl-diaminopimelate desuccinylase TERM 918 1147241 - 1147258 + r 72 -6.3 -4.31563 | overlap 1147232 CTTGGTGGTGGGTAT TTCCTGC CTTA GTAGGAA TGTTTTTTATAATTA A1E_05590 1147408 - 1147271 - | hypothetical protein A1E_05595 1147501 - 1147439 - | hypothetical protein A1E_05600 1147733 - 1147614 - | succinyl-diaminopimelate desuccinylase A1E_05605 1147878 - 1147753 - | hypothetical protein A1E_05610 1148660 - 1148031 - | lipoyltransferase lipB 1149408 - 1148662 - | lipoyltransferase rpsP 1150102 - 1149767 - | 30S ribosomal protein S16 rpmG 1150288 - 1150118 - | 50S ribosomal protein L33 A1E_05630 1152216 - 1150384 - | DNA mismatch repair protein A1E_05635 1152377 - 1152213 - | hypothetical protein TERM 919 1152251 - 1152264 + g 81 -2.3 -6.04953 | TCTTACTACAATATG GGCAG GTAA CTTCC TTTTTTTCTTTATCT A1E_05640 1152633 - 1153097 + | oxidoreductase TERM 920 1153232 - 1153218 - g 82 -8.6 -4.08689 | overlap 1153223 TAGTCAAGAATCAAA TAGCAG ATA CTGCTA AAGCTAGAAATATCA A1E_05645 1153145 - 1153411 + | oxidoreductase TERM 921 1153457 - 1153428 - f 70 -8.1 -3.06261 | TTTTAATTCTTAATA TTTGTTAGTTATT GAGA AATAACTAACAAT AAAACTTCTTGCAAA A1E_05650 1153952 - 1154263 + | hypothetical protein mutL 1154505 - 1155770 + | DNA mismatch repair protein A1E_05660 1155914 - 1156747 + | coproporphyrinogen III oxidase A1E_05665 1157305 - 1156868 - | coproporphyrinogen III oxidase hemH 1158360 - 1157317 - | ferrochelatase hemE 1159386 - 1158367 - | uroporphyrinogen decarboxylase