TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.389473 %AT, 4597573 nt, 49770 terms. Intergenic: 0.4079 %AT, H2T: 753595 nt, 6749 terms; T2T: 252472 nt, 4458 terms; H2H: 229036 nt, 4157 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|156740028|ref|NC_009767.1| Roseiflexus castenholzii DSM 13941, complete genome (length 5723298) Rcas_0001 370 - 1812 + | chromosomal replication initiator protein DnaA TERM 1 2068 - 2086 + G 86 -13.1 -4.07687 | opp_overlap 2065 TCGCCGAGGCAATGG CCGGCGG CGCCA CCGCCGG TTTTGCCCGCGCAAT Rcas_0002 1923 - 3086 + | secreted hydrolase-like protein TERM 2 3188 - 3161 - g 73 -12.8 -3.21595 | gap 1, opp_overlap 3166 AAGGTCTACTACGAA GACAC-CGACGCC CTC GGCGTCGTGTATC ACGCCAATTACCTCA TERM 3 3166 - 3182 + G 74 -13.7 -2.87463 | opp_overlap 3161 CTACTACGAAGACAC CGACGCC CTC GGCGTCG TGTATCACGCCAATT Rcas_0003 3125 - 3502 + | thioesterase superfamily protein Rcas_0004 3965 - 3540 - | hypothetical protein Rcas_0005 4196 - 3966 - | hypothetical protein Rcas_0006 4687 - 4259 - | histidine triad (HIT) protein TERM 4 4417 - 4430 + g 71 -9.5 -3.78934 | opp_overlap 4406 GAAACACCACCTGCC CGGCG GCGG CGCCG TTGTTCTGGACGACA Rcas_0007 6460 - 4718 - | phosphotransferase domain-containing protein TERM 5 6215 - 6251 + g 70 -7.2 -4.09864 | gap 1, overlap 6217 6218 6239 6243 6245 CCGGAGCCGGTTGTA GTACGGC-AACTCCCCG GTAT CGAGGAGTTCGCCGATC TTTTCGGCGATGGCT Rcas_0008 6922 - 7395 + | transcription elongation factor GreA TERM 6 7428 - 7468 + F 100 -19.8 -3.66999 | opp_overlap 7396 7428 GGTTCCACGACCGAA CGCGCGCGGATGTCATCC AAAGG GGGTGATGTTCGCGCGCG TTTCGATGAATACGT Rcas_0009 7529 - 8998 + | lysyl-tRNA synthetase Rcas_0010 9035 - 9283 + | hypothetical protein Rcas_0011 9480 - 9875 + | death-on-curing family protein TERM 7 10291 - 10311 + G 72 -11.8 -3.36135 | overlap 10292 GAGACTGCGCCACTG TCCGGCGG CGCTC CCGCCGGG TTGCTTCAGGATTAT TERM 8 10430 - 10440 + G 78 -3.2 -5.03314 | overlap 10424 ATGGCGTCCGCTCGC CTGT CGT GCAG TTTTTTACCCGTCGC TERM 9 10614 - 10650 + G 89 -16.6 -3.53444 | gap 2, overlap 10634 GCAGGCAATTTTGTT CGCC-G-GCGGGCAGCCG CTG CCGCTGCCCGCGCTGGCG TTTCAGGCGGCATCG TERM 10 10802 - 10849 + G 73 -10.7 -3.63694 | opp_overlap 10799, overlap 10778 10803 GGCCAGATGAGACGC TGCGTGAATTCGCT-GCGGATCA CGCA TGATCCGCCGGCGC-TTCACGCC TTGTTGAGAGTGCAT TERM 11 10803 - 10848 + G 75 -14.2 -2.77895 | opp_overlap 10799, overlap 10778 10802 GCCAGATGAGACGCT GCGTGAATTCGCT-GCGGATCA CGCA TGATCCGCCGGCGC-TTCACGC CTTGTTGAGAGTGCA Rcas_0012 9892 - 10830 + | NAD-dependent epimerase/dehydratase TERM 12 11246 - 11232 - g 71 -12.8 -3.04144 | overlap 11210 GCCGGAGCCGGAAGA GGCGCC GCC GGCGCC AGAGGAAGAGATCGG TERM 13 11432 - 11459 + G 71 -13.4 -2.66316 | opp_overlap 11431 11430, overlap 11429 TGATCCGCGAGAACC TTGAGCGCCTGC GCCC GCCGGCGCTCGA TAATGTCGTGACAGC TERM 14 11589 - 11563 - g 75 -13.6 -3.07113 | opp_overlap 11555 11554, overlap 11567 TATCAGGTCACCGAA CTGACGGCGCTG ATC CAGCGCCGGCTG CGCGGCGAGTTTGCC TERM 15 11585 - 11567 - g 80 -16 -2.55015 | opp_overlap 11555 11554, overlap 11563 AGGTCACCGAACTGA CGGCGCTG ATC CAGCGCCG GCTGCGCGGCGAGTT TERM 16 11650 - 11660 + G 71 -8.2 -3.84712 | overlap 11658 ATCGAGTTGGTGCGC CCGG TTG CCGG TTTCCTCTACCGTTC Rcas_0013 11062 - 12375 + | phospholipid/glycerol acyltransferase Rcas_0014 14769 - 13696 - | glycosyl transferase family protein TERM 17 15426 - 15396 - g 81 -15.4 -3.10112 | opp_overlap 15423 ATCGAACCCACGGAA CCGGCGCGTCCG ACCGTTG CGGAGGCGCCGG TCGTCCCGGTTGCGT TERM 18 15801 - 15842 + G 76 -5.8 -4.63044 | gap 2, opp_overlap 15794, overlap 15799 GAACTCAACCCGACG CTCGGTGG-AG-GCGTCGCG CTCA CGCGGCGCACGATCAGCGAG TTTCTTTCTATCCCT Rcas_0015 14871 - 16382 + | cell envelope-related transcriptional attenuator Rcas_0016 16565 - 17104 + | thioesterase superfamily protein Rcas_0017 18325 - 17324 - | glycosyl transferase family protein Rcas_0018 18464 - 19081 + | BioY protein TERM 19 20210 - 20229 + T 74 -12.8 -3.17392 | opp_overlap 20206 CACCCCGAACAGCGC GCGGGGCG TGCG CGTCCCGC TTAGATTCCGCGCTG Rcas_0019 22704 - 21418 - | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Rcas_0020 23590 - 22709 - | amidinotransferase TERM 20 22805 - 22816 + g 76 -7.2 -4.30995 | overlap 22802 CACCTCGCACCCCGC CGCC TCCA GGCG TTGTTTTGTCACCGG TERM 21 23933 - 23952 + H 74 -12.8 -3.21199 | CACCCCGAGCAGCGC GCGGGGCG TGCG CGTCCCGC TTAGATTCCTCGCTG TERM 22 24215 - 24257 + H 88 -13.5 -3.59979 | overlap 24216 24218 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG TCC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 23 24216 - 24256 + H 84 -17 -2.75844 | overlap 24215 24218 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG TCC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 24 24218 - 24253 + H 85 -18.4 -2.65354 | gap 1, overlap 24216 24215 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG TCC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG TERM 25 25692 - 25704 + H 70 -4.7 -4.57837 | overlap 25693 CACCCGGCAACTCAG GCGCC TGA GCCGC TTTTTCAGGCGATCT TERM 26 26125 - 26141 + G 77 -15.1 -2.64243 | GGATGAGCAGCGCAT CGGCGCG TTG CGCGCCG TCGTGTACGATCTCG Rcas_0021 25868 - 27007 + | hypothetical protein TERM 27 27225 - 27236 + F 74 -7.2 -4.42386 | opp_overlap 27216 ATGAAACACGAGTTC CGCG GTGG CGCG TTTTCTGGCTCCGCC TERM 28 27376 - 27360 - f 72 -2.2 -4.74103 | overlap 27364 TGCCGAAGGCAAAAA GAACCA TCACG CGGCTC GTCCTTCCTTAAACC Rcas_0022 27424 - 28374 + | glyoxalase/bleomycin resistance protein/dioxygenase Rcas_0023 30525 - 28504 - | sodium/hydrogen exchanger Rcas_0024 30940 - 31614 + | ECF subfamily RNA polymerase sigma-24 factor Rcas_0025 31620 - 32162 + | putative transmembrane anti-sigma factor TERM 29 32225 - 32190 - f 86 -14.1 -3.44146 | gap 1, opp_overlap 32191, overlap 32191 CCGTTTGAGAACGAA GCGCCGGAATGCAGAG GTCTT CTC-GCATTCCGGCGT TTGTGTGACGCATAG TERM 30 32191 - 32224 + F 100 -18.3 -4.0371 | gap 1, opp_overlap 32191 32190 CGTTTGAGAACGAAG CGCCGGAATGCAGAGG TCT TCTC-GCATTCCGGCG TTTGTGTGACGCATA TERM 31 32224 - 32191 - f 83 -17.6 -2.66274 | gap 1, opp_overlap 32191, overlap 32190 CGTTTGAGAACGAAG CGCCGGAATGCAGAG GTCTT CTC-GCATTCCGGCG TTTGTGTGACGCATA Rcas_0026 32298 - 32636 + | hypothetical protein TERM 32 33042 - 33005 - T 78 -15.6 -2.65264 | gap 2, opp_overlap 33005, overlap 33025 CCAGCACTCACACCA GCGCCG-CCGG-CTTGCG CAAA CGCCAGACCGGTCGGCGC AGTCGACGCCGCTTG TERM 33 33094 - 33071 - T 93 -16 -3.62591 | gap 1 TGGATAATCCTGAAA CGCGCGCCCGC AGC GCGGGCG-GCG ATAGGGATACGCCGC Rcas_0027 34134 - 33607 - | single-strand binding protein TERM 34 35128 - 35140 + G 70 -7.7 -4.05747 | opp_overlap 35126, overlap 35126 CCGGTGAACGCAACG TCGTC TAC GACGA TTTCTATCGCGTATG Rcas_0028 34407 - 36539 + | glycosyl transferase group 1 TERM 35 36590 - 36576 - g 71 -5.6 -4.2558 | GATTGTTCATGAAAA GCGCCG CAC CGACAC CGCCCATCGTCGAAG TERM 36 37403 - 37447 + G 73 -8.4 -4.06903 | gap 1, overlap 37405 TTTGTGCGCCCGCTC TTCGG-GCGCGGCGTGGCCGC CGGC GCGGCCACCCTCCTCGCCGTA TTTCATTTCCACATT TERM 37 37405 - 37445 + G 73 -11 -3.62354 | gap 1, overlap 37403 TGTGCGCCCGCTCTT CGG-GCGCGGCGTGGCCGC CGGC GCGGCCACCCTCCTCGCCG TATTTCATTTCCACA Rcas_0029 36569 - 38632 + | glycosyl transferase family protein Rcas_0030 38648 - 39301 + | deoxynucleoside kinase TERM 38 40915 - 40899 - g 75 -13.7 -3.05384 | TTTTCCTCGACCGAA GCCGCTG TCG CAGCGGC GTTAGAAATTCAGCG Rcas_0031 39423 - 41324 + | adenylate/guanylate cyclase TERM 39 41386 - 41428 + F 73 -10.7 -3.66178 | gap 1, opp_overlap 41392 41395, overlap 41387 41395 CCCGACCATGCCATG GGACAACAACGACCTGTAAC TGCT GTTGCAGGTCGTTGC-GTCG TTTGCAGTTGAGGCG TERM 40 41387 - 41427 + F 73 -14.2 -2.79492 | gap 1, opp_overlap 41392 41395, overlap 41386 41395 CCGACCATGCCATGG GACAACAACGACCTGTAAC TGCT GTTGCAGGTCGTTGC-GTC GTTTGCAGTTGAGGC TERM 41 41423 - 41392 - f 89 -16 -3.33162 | opp_overlap 41387 41386 41395, overlap 41395 CATGCCATGGGACAA CAACGACCTGTAAC TGCT GTTGCAGGTCGTTG CGTCGTTTGCAGTTG TERM 42 41395 - 41420 + F 78 -14.1 -3.1634 | opp_overlap 41392 41395, overlap 41387 41386 GCCATGGGACAACAA CGACCTGTAAC TGCT GTTGCAGGTCG TTGCGTCGTTTGCAG TERM 43 41420 - 41395 - f 80 -11.9 -3.80733 | opp_overlap 41395 41387 41386, overlap 41392 GCCATGGGACAACAA CGACCTGTAAC TGCT GTTGCAGGTCG TTGCGTCGTTTGCAG TERM 44 41996 - 42014 + G 72 -12.4 -3.28712 | opp_overlap 41978 GCACTTGCGTCTCAG TCGCGCCG GAC TGGCGCGA TTGTACGCAAAAGGG TERM 45 43731 - 43712 - g 76 -8.5 -4.24002 | overlap 43704 43715 43723 CTCGAAACTGCAAAA GCAGCGC GAAAGT GCGCCGC TGCCGCGCGCGGAGG Rcas_0032 41601 - 45938 + | TPR repeat-containing protein Rcas_0033 45982 - 46341 + | roadblock/LC7 family protein TERM 46 46415 - 46450 + F 89 -12.6 -4.10566 | gap 1, overlap 46417 46438 TCGCTCGACTGCTAG TTTCGCGCCCGTGAGTG CCA CGCTCA-GGGCGCGATG TTTGTGTCCTGCTAT TERM 47 46417 - 46448 + F 100 -17.4 -3.64332 | gap 1, overlap 46415 46438 GCTCGACTGCTAGTT TCGCGCCCGTGAGTG CCA CGCTCA-GGGCGCGA TGTTTGTGTCCTGCT Rcas_0034 46487 - 46936 + | nucleoside-diphosphate kinase Rcas_0035 48208 - 46943 - | hypothetical protein Rcas_0036 50185 - 48275 - | VanW family protein Rcas_0037 50983 - 50282 - | DNA repair protein RadC Rcas_0038 53136 - 51343 - | peptidase M23B Rcas_0040 54087 - 53764 - | CutA1 divalent ion tolerance protein TERM 48 54883 - 54865 - g 74 -12.4 -3.53091 | ACCGTCGTGCTGAAA CCGGCGCT GGC AACGCCGG AAACTGCGGAATGGC TERM 49 54911 - 54944 + G 72 -13.9 -2.78384 | GGCTGGTGCGCTGCT TTGCCGACGCCGG CGCGCCAT CCGGCGTCGTCAA TCTGGTGCACGGCGC Rcas_0041 54325 - 55779 + | aldehyde dehydrogenase Rcas_0042 56665 - 55781 - | hypothetical protein Rcas_0043 56990 - 57949 + | hypothetical protein TERM 50 58548 - 58563 + G 100 -10.4 -4.87665 | opp_overlap 58548 GTGATCGGCAAGGGA CAGCGC CGTC GCGCTG TTTTTCTCCGTGCGC Rcas_0044 57963 - 58976 + | integrase family protein Rcas_0045 59089 - 60288 + | NAD-dependent epimerase/dehydratase Rcas_0046 62023 - 60431 - | glycyl-tRNA synthetase TERM 51 60779 - 60796 + g 86 -7 -5.09895 | CTCATCGACCAGTCC TTGCGC TTGCCC GCGCAA TTTTTTCCCTAACTC TERM 52 62073 - 62050 - R 100 -13.9 -5.4505 | overlap 62062 CTGTTCAACAAAAAA CCCAGGCGA ACATCG TCGCCTGGG GACGCATTGCACTGC Rcas_0047 63205 - 62261 - | integrase family protein Rcas_0048 64361 - 63354 - | nifR3 family TIM-barrel protein Rcas_0049 64662 - 64435 - | hypothetical protein Rcas_0050 64741 - 66081 + | hypothetical protein Rcas_0051 67074 - 66082 - | hypothetical protein Rcas_0052 67172 - 67666 + | hypothetical protein Rcas_0053 68164 - 67679 - | hypothetical protein TERM 53 68190 - 68208 + H 70 -10.2 -3.54475 | opp_overlap 68193, overlap 68193 CTGATACAATGGCAA CAACCGGC AAT GCCGGTCG TTCTATGATACGACC TERM 54 68205 - 68193 - H 73 -10.5 -3.70081 | opp_overlap 68190 68193 ATACAATGGCAACAA CCGGC AAT GCCGG TCGTTCTATGATACG Rcas_0054 68332 - 69099 + | inositol monophosphatase Rcas_0055 69112 - 70179 + | radical SAM domain-containing protein TERM 55 70277 - 70321 + G 100 -9.9 -4.7497 | gap 1, opp_overlap 70246, overlap 70278 GCCGAGCATCATCTT GCCGGCGACCGCCTGG-CGC TCAAAC GCGATCAGGACGTCGCCGGG TTTTTGATGGCTGCG TERM 56 70278 - 70320 + G 79 -13.4 -3.445 | gap 1, opp_overlap 70246, overlap 70277 CCGAGCATCATCTTG CCGGCGACCGCCTGG-CGC TCAAAC GCGATCAGGACGTCGCCGG GTTTTTGATGGCTGC Rcas_0056 70217 - 70438 + | hypothetical protein TERM 57 70491 - 70477 - f 74 -3.5 -4.74801 | GAACGCGAGGAAAAA GGATG CCAAT CACCC TCGACGACATTCGCG TERM 58 71315 - 71333 + G 70 -12.4 -3.14132 | opp_overlap 71310 CGTCGAAGGAGCCGG CGCTGCCG GAC TGGCAGCG TTGATCAGCGGGCAG Rcas_0057 70479 - 71711 + | threonine dehydratase Rcas_0058 71729 - 71950 + | hypothetical protein Rcas_0059 72044 - 72265 + | hypothetical protein Rcas_0060 75718 - 72281 - | transcriptional activator domain-containing protein TERM 59 72423 - 72379 - G 70 -12.8 -2.87931 | gap 2, opp_overlap 72411, overlap 72364 72365 CGCACCGCGTATACA GGCGCAGCGCTGTGCTGCGCTC ACC GAGCGCAGCGT-GCGC-GCGCA TCAGCAGGCGGTACG TERM 60 73671 - 73628 - G 86 -13.7 -3.86015 | gap 1, opp_overlap 73628, overlap 73629 GAGCCGGCGCACAAA CGCGGCGGCGGC-GGCGGCG GCGCG CGCCGCCTGACCACGCCGCA GCATACTGTACAGTT TERM 61 73670 - 73629 - G 77 -15 -2.91395 | gap 1, opp_overlap 73628, overlap 73628 AGCCGGCGCACAAAC GCGGCGGCGGC-GGCGGCG GCGCG CGCCGCCTGACCACGCCGC AGCATACTGTACAGT TERM 62 74262 - 74241 - G 73 -10.9 -3.57119 | gap 1, overlap 74232 74242 CACACAGCGGCGAAA TC-GGCAGGC CGC GCCTGCCAGA AGAGGAGCGCTGCCA TERM 63 76075 - 76107 + H 93 -11.5 -4.37886 | gap 1, opp_overlap 76080, overlap 76075 76076 76080 CAGGGCGGCACACCG T-CAAACCCCACTG ACCGCA CAGTGGGGTTTGCA TTTTGTGGAACATCC TERM 64 76075 - 76106 + H 74 -13.1 -3.2241 | opp_overlap 76080, overlap 76075 76076 76080 CAGGGCGGCACACCG TCAAACCCCACTG ACCGCA CAGTGGGGTTTGC ATTTTGTGGAACATC TERM 65 76076 - 76105 + H 83 -16.6 -2.53125 | opp_overlap 76080, overlap 76075 76075 76080 AGGGCGGCACACCGT CAAACCCCACTG ACCGCA CAGTGGGGTTTG CATTTTGTGGAACAT TERM 66 76080 - 76101 + H 82 -11.6 -3.96705 | opp_overlap 76080, overlap 76076 76075 76075 CGGCACACCGTCAAA CCCCACTG ACCGCA CAGTGGGG TTTGCATTTTGTGGA TERM 67 76101 - 76080 - H 77 -11.6 -3.59262 | opp_overlap 76080 76076 76075 76075 CGGCACACCGTCAAA CCCCACTG ACCGCA CAGTGGGG TTTGCATTTTGTGGA Rcas_0061 76292 - 76846 + | colicin V production protein TERM 68 78275 - 78228 - g 73 -12.6 -3.14132 | gap 1, opp_overlap 78228 78227 78269 GTGTTGCTCGATGAA CTCG-GCGCCGGCACCGATCC GGTGGAA GGTTCGGCGCTGGCGCGCGCG ATTATCGAGCGCTTG Rcas_0062 76893 - 79373 + | MutS2 family protein Rcas_0063 79381 - 79989 + | peptidoglycan-binding LysM Rcas_0064 79986 - 80501 + | hypothetical protein TERM 69 81518 - 81485 - g 83 -16.9 -2.64803 | gap 1, opp_overlap 81492 81493 81495, overlap 81446 81482 81481 TCACCGGGAAACTCA GCCAGAACGATCTGCG CGG CGC-GATCATTCTGGC ACACTGTGGCAGCGA Rcas_0065 80524 - 81621 + | polysaccharide deacetylase Rcas_0066 83078 - 81867 - | TRAP dicarboxylate transporter- DctP subunit TERM 70 82015 - 82033 + g 83 -7.4 -4.53602 | opp_overlap 82009, overlap 82017 AGCTCAAAAGCGGCC TTCTCGGC AGC GTCGAGGA TTTCTTTGCTATACG Rcas_0067 83920 - 83306 - | hypothetical protein Rcas_0068 85336 - 83942 - | hypothetical protein TERM 71 85736 - 85757 + r 79 -8.7 -4.2231 | GTTCGCTCATTTGGC GACCGCCTT GATG AAGTCGGTC TTTTGCATGCTGGTT Rcas_0069 88785 - 85876 - | hypothetical protein TERM 72 86177 - 86161 - G 86 -12.3 -4.1552 | CACCTGTGCAATAAA GCGATCC GCC GGATCGC CATCATCGGGAAGAA TERM 73 87368 - 87393 + g 74 -13.3 -3.35996 | gap 1 ATCTGGCGCAGATCG CGCAGCGTCGGT CCG ACCGGCGC-GCG TTGTCCATCAGCGTG TERM 74 88441 - 88419 - G 71 -12.6 -2.99947 | overlap 88417 88407 GAATCTGGAGACACA GCGGCGCACG CAG CGCGCGCTGC GCCCGATAGCGTGCA Rcas_0070 89201 - 88782 - | hypothetical protein TERM 75 89102 - 89124 + g 71 -13.4 -2.53164 | opp_overlap 89099 89103, overlap 89101 CACCGTCACCAACCG AGGCGTCGTC AGC GACGACGCCG GTTGCTGCTGCGTGC TERM 76 89123 - 89103 - G 83 -16.9 -2.56715 | opp_overlap 89102 89101, overlap 89099 ACCGTCACCAACCGA GGCGTCGTC AGC GACGACGCC GGTTGCTGCTGCGTG Rcas_0071 89430 - 89188 - | hypothetical protein TERM 77 89619 - 89655 + r 78 -9.9 -3.85698 | overlap 89620 89627 CCGCCTAGCGCGGCG AGGCGCTCCAGGGCGCG GTG CGCGCGCTGTTGCGTCG TTTGTGGAAGAGGCG TERM 78 89620 - 89654 + r 75 -13.4 -2.91276 | overlap 89619 89627 CGCCTAGCGCGGCGA GGCGCTCCAGGGCGCG GTG CGCGCGCTGTTGCGTC GTTTGTGGAAGAGGC TERM 79 89627 - 89647 + r 74 -12.5 -3.17798 | overlap 89620 89619 CGCGGCGAGGCGCTC CAGGGCGCG GTG CGCGCGCTG TTGCGTCGTTTGTGG Rcas_0073 91207 - 90026 - | hypothetical protein TERM 80 90582 - 90572 - G 72 -2.4 -4.7254 | ACCTTCTATCAAAAA CAGG TTC CCGG TAACACGTTCTCGCC Rcas_0074 92751 - 91462 - | phosphopyruvate hydratase TERM 81 92793 - 92825 + r 73 -9.8 -3.65002 | opp_overlap 92815, overlap 92806 TTGCGTGTCCTTCAT CCGTCGAGCCGTTG GAAGG CAACAGCTCTGCGG TTGTATGTCCTTCAT Rcas_0075 94029 - 92956 - | DRTGG domain-containing protein Rcas_0076 96179 - 94083 - | acetyl coenzyme A synthetase subunit alpha TERM 82 95199 - 95145 - G 84 -17.1 -2.81173 | gap 1, overlap 95147 ATCAATCGGATTAGA GACGCTGGCGGTCGACGGCAACGCTG CTCG CAGCGCCGCCATCGTC-GCAGGCGTC AACTCCGCCAGATGC TERM 83 95197 - 95147 - G 74 -13.9 -2.95223 | gap 1, overlap 95145 CAATCGGATTAGAGA CGCTGGCGGTCGACGGCAACGCTG CTCG CAGCGCCGCCATCGTC-GCAGGCG TCAACTCCGCCAGAT TERM 84 95296 - 95249 - G 77 -12.9 -3.61715 | gap 3 CATCGGTTGCAATAA TCCCTGG-A-CCGCC-GGCATTCG TCA CAATTGCCAGGCGGTTGCCAGGGA TGAGCGGTTGATACG TERM 85 96562 - 96579 + r 85 -2.6 -5.4505 | overlap 96563 CATAGCGGGCAGGCA TGGCGT TGGGAT GCGCCG TTTTTTCTTCACCCC Rcas_0077 99592 - 96878 - | leucyl-tRNA synthetase TERM 86 99545 - 99571 + g 91 -9.4 -4.46155 | overlap 99536 CCATTTTGGCTCGAT CGCCGGATCGAA CCG TTCGATACGCCG TTTTGTCCCTGTGTC Rcas_0078 100456 - 99635 - | methyltransferase type 11 Rcas_0079 101056 - 100541 - | hypothetical protein TERM 87 100626 - 100614 - G 76 -6.9 -4.42238 | TCATCCGAATCAAAA GGGGC GAT ACCCC AGACATATGCCACGT Rcas_0080 102074 - 101058 - | hypothetical protein Rcas_0081 102759 - 102424 - | hypothetical protein Rcas_0082 102986 - 102756 - | hypothetical protein Rcas_0083 104125 - 103142 - | ribose-phosphate pyrophosphokinase TERM 88 105118 - 105103 - g 100 -11.8 -4.56597 | overlap 105105 GGGGTGTTGCAAAAA GCCGCC GAGG GGCGGC GCGCCGACGCGCGTA TERM 89 105326 - 105353 + G 70 -12.6 -2.87564 | TGGAGATAACTCTGA GCGACGAGGCGC TGGC GCGGCTCGACGC TATCTGGCCCGGTCC Rcas_0084 104416 - 105402 + | aldo/keto reductase Rcas_0085 105460 - 106272 + | hypothetical protein TERM 90 106401 - 106366 - T 76 -14.8 -2.65354 | gap 1, overlap 106363 106362 CTCAGGGTAAACTCA GCGAGGAATCTGA-GCG GGT CGCGCCAGACCCCTCGC GCTGATCGGGGTGAC Rcas_0086 108595 - 106490 - | translation elongation factor G TERM 91 107086 - 107108 + g 80 -4.6 -4.84359 | overlap 107087 107089 107091 TCGTCACATCGGCGA ACTGCCCGGC GCC GCCGGTCTGC TTTTTGTGGCGGTAC TERM 92 108650 - 108629 - R 74 -12.3 -3.19602 | gap 1, overlap 108627 CGTTGGACAGGAAGA GCGC-CTGCC CGG GGCAGTGCGC GTCAGATACTCACGG Rcas_0087 110431 - 109067 - | FolC bifunctional protein TERM 93 110607 - 110639 + G 83 -6.9 -4.95957 | overlap 110609 110610 ACCAACATCGAGAGG AGTTGCGGCGTCTGG GGA TCAGACGCTGCGGTA TTTTTGGTTCATTTG TERM 94 110609 - 110637 + G 83 -11.7 -4.07912 | overlap 110607 110610 CAACATCGAGAGGAG TTGCGGCGTCTGG GGA TCAGACGCTGCGG TATTTTTGGTTCATT TERM 95 110610 - 110636 + G 71 -13 -3.03121 | overlap 110609 110607 AACATCGAGAGGAGT TGCGGCGTCTGG GGA TCAGACGCTGCG GTATTTTTGGTTCAT Rcas_0088 110552 - 110863 + | DNA polymerase beta subunit Rcas_0089 110844 - 111191 + | hypothetical protein Rcas_0090 111188 - 113281 + | molybdopterin oxidoreductase Rcas_0091 113278 - 113799 + | shikimate kinase Rcas_0092 114050 - 115009 + | hypothetical protein Rcas_0093 115318 - 116433 + | 3-dehydroquinate synthase Rcas_0094 116430 - 116843 + | HI0074 family nucleotidyltransferase substrate binding protein Rcas_0095 116840 - 117178 + | DNA polymerase beta subunit Rcas_0097 117968 - 117561 - | Cna B domain-containing protein Rcas_0098 118604 - 118188 - | Cna B domain-containing protein Rcas_0099 118773 - 120122 + | protein serine/threonine phosphatase TERM 96 121041 - 121057 + G 84 -10.9 -4.11216 | opp_overlap 121040 121039 GCTGCTGATGAAAGG TCGCCAT CCT ATGGCGA TTTTGAACATCACGG TERM 97 121824 - 121802 - g 70 -10.5 -3.61398 | GTCGTGGCGGAACAA CGCCACACG ACTGG CGTGAGGCG CTGCTGATCACCCTC Rcas_0100 120193 - 122010 + | DNA mismatch repair protein MutL Rcas_0101 122716 - 122003 - | DtxR family iron dependent repressor Rcas_0102 123090 - 122743 - | hypothetical protein Rcas_0103 124613 - 123087 - | carbohydrate kinase FGGY TERM 98 124347 - 124290 - G 70 -13.3 -2.87564 | gap 1, overlap 124311 CCAGCGTTGCACATA CG-GAGCAGTGCGCCGATCATACCAGGC GAT GATCGGGGTGAGCGGCGCACCGCTCGCG TCAACCAGCACGCCG TERM 99 124706 - 124672 - R 100 -15.9 -5.49809 | gap 1, overlap 124699 124700 GAAACCTCAAAAAAA CAGCGACGTC-GGATG GCGT CATCCAAACGTCGCTG CCAGAACGGCACGGA Rcas_0104 125483 - 124743 - | short-chain dehydrogenase/reductase SDR Rcas_0105 126634 - 125516 - | alpha/beta hydrolase fold Rcas_0106 127281 - 126679 - | hypothetical protein TERM 100 126744 - 126759 + g 75 -11.8 -3.56099 | overlap 126753 GCTCCGGATCGGGCG GCGCCG GACG CGGCGC TTTGCGGCGCTTCTG TERM 101 127255 - 127267 + g 75 -3.3 -4.83615 | GCCAATCGGATCGTT CGGAT CGA AGCCG TTTTTCTGGCCCATC TERM 102 127405 - 127389 - H 90 -5.7 -5.26316 | overlap 127391 127392 GTAGGGGATAAAAAA GACGCGC CCT GCGCAAC CGTTTCTGTCATGAG TERM 103 127403 - 127391 - H 71 -6.9 -4.26475 | overlap 127389 127392 AGGGGATAAAAAAGA CGCGC CCT GCGCA ACCGTTTCTGTCATG TERM 104 127968 - 127990 + H 100 -12.7 -4.32857 | CGTGAGAGCGTTCAA CCCCTTCGG CGTTA CCGGAGGGG TTTCTGTTTGGGGCG TERM 105 128120 - 128144 + H 95 -12.2 -4.20367 | gap 1 GCTTCCTCTGTGACA CCCTGGCG-AG CGTG CTGCGCCAGGG TTGTTTGTTGAGCGC Rcas_0107 128145 - 128390 + | hypothetical protein TERM 106 128493 - 128448 - f 71 -6.8 -4.2704 | gap 2, opp_overlap 128451, overlap 128444 TGGACGATGAACAAA GACG-GGCGTCTGACGGCG-AC CTTC GTGCGCCCGCAGACGCTGCGCC CGCTCTCGCTGGCGC TERM 107 128601 - 128626 + F 74 -11.8 -3.55453 | opp_overlap 128604, overlap 128597 GGGCGAATGCCGGAA CCAGCGCCTG AGGCGG CAGGCGCCGG TTGATTCTGTTGATG Rcas_0108 128678 - 129049 + | hypothetical protein TERM 108 129582 - 129594 + G 74 -9.1 -3.87815 | CTTCCTTCAGTCGTT GCCGA TCC TCGGC TTTCTGACGGTGACG Rcas_0109 129247 - 131262 + | binding-protein-dependent transport systems inner membrane component TERM 109 132010 - 132032 + G 81 -9.8 -4.1552 | TCGACCTGCCGCGCC CGCGTGATCG CAA TGATCCCGCG TTTCTTGCCGCCGTC Rcas_0110 131280 - 132617 + | ABC transporter related Rcas_0111 132882 - 133745 + | MgtC/SapB transporter TERM 110 133742 - 133726 - T 77 -3.5 -5.00027 | overlap 133728 ACGAAAAAGAGAAAA CGCTAGC GCC GCGCGCG TAATGCCTGGTCTCT Rcas_0112 134799 - 134044 - | protein serine/threonine phosphatase TERM 111 134575 - 134610 + g 93 -16.1 -3.75332 | opp_overlap 134569, overlap 134578 GTACAGATAGTCGTG GACGGCGCGCGCCAC TATGCC GTCGCGCGCGCCATC TTTGAGTTGCGAAAT TERM 112 134578 - 134607 + g 80 -16.4 -2.6732 | opp_overlap 134569, overlap 134575 CAGATAGTCGTGGAC GGCGCGCGCCAC TATGCC GTCGCGCGCGCC ATCTTTGAGTTGCGA TERM 113 135037 - 135095 + r 73 -9.8 -3.57263 | gap 3, opp_overlap 135037 135041, overlap 135041 GAGGAGTGAGGGAAA GAT-AGG-GGCA-GGGAACCAGGTTCTCA GTTC TCAGTTCCTGGTTCCCTTGCCACCTCATC TTTCACCCTAACCCT TERM 114 135095 - 135037 - R 73 -9.8 -3.67296 | gap 3, opp_overlap 135037 135041, overlap 135041 GAGGAGTGAGGGAAA GAT-AGG-GGCA-GGGAACCAGGTTCTCA GTTC TCAGTTCCTGGTTCCCTTGCCACCTCATC TTTCACCCTAACCCT TERM 115 135089 - 135041 - R 72 -11 -3.27676 | gap 1, opp_overlap 135041 135037, overlap 135037 AGTGAGGGAAAGATA GGGGCA-GGGAACCAGGTTCTCA GTTC TCAGTTCCTGGTTCCCTTGCCAC CTCATCTTTCACCCT Rcas_0113 136470 - 135103 - | extracellular solute-binding protein TERM 116 135555 - 135542 - G 79 -8.1 -4.36914 | CCCTCCGGCAGAAAA CCGGT GCCA ACCGG GAACTGCGCGTTCTT TERM 117 136522 - 136554 + r 70 -10.6 -3.55444 | opp_overlap 136525, overlap 136523 136525 GGTTGACGCCTGATA CGACCGGTGTAATC ACGTG GACTACACCGGTCA TTTCAACCCTCAACC TERM 118 136523 - 136553 + r 73 -14.1 -2.73124 | opp_overlap 136525, overlap 136522 136525 GTTGACGCCTGATAC GACCGGTGTAATC ACGTG GACTACACCGGTC ATTTCAACCCTCAAC Rcas_0114 137790 - 136891 - | binding-protein-dependent transport systems inner membrane component Rcas_0115 138929 - 138018 - | binding-protein-dependent transport systems inner membrane component Rcas_0116 139332 - 139541 + | hypothetical protein TERM 119 139614 - 139636 + F 100 -15.6 -4.03888 | CTGGAATGCGGCATC GCCAGCAGTC GTC GGCTGCTGGC TTGTTCTTCTCCCTG TERM 120 139818 - 139806 - g 70 -10.5 -3.65529 | overlap 139784 AGATCGCCATCGAAA GCGCC TCA GGCGC GCTGGTGACGGATGT TERM 121 140111 - 140082 - g 79 -8.6 -4.30034 | gap 2, opp_overlap 140098 140101, overlap 140049 AAAACGCTATCAAAA TCGCCC-GCG-CCG CGAC CGGTCGCCAGGCGA TCATTGCGTTCGAAG Rcas_0117 139673 - 141034 + | aminotransferase class-III TERM 122 141382 - 141400 + G 72 -2.4 -4.68724 | opp_overlap 141366, overlap 141384 GCGCTCTCTATGCAA TGCTCG GTGTGCG CGAGTA TTTTCTGTTCGATCC Rcas_0118 141027 - 141791 + | hypothetical protein Rcas_0119 141788 - 142405 + | hypothetical protein Rcas_0120 142579 - 142926 + | hypothetical protein TERM 123 143015 - 143043 + F 78 -13.7 -3.17194 | overlap 143018 CCAGGACCCTTGAGC GCGCGGGCGCGCC AGC GGCGCGCCCCTAC TTCCCTTCGCGCGGT TERM 124 143018 - 143040 + F 79 -16.2 -2.78712 | overlap 143015 GGACCCTTGAGCGCG CGGGCGCGCC AGC GGCGCGCCCC TACTTCCCTTCGCGC Rcas_0121 143241 - 144605 + | histidyl-tRNA synthetase Rcas_0122 144595 - 145233 + | formiminotransferase-cyclodeaminase Rcas_0123 145306 - 146256 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 125 146390 - 146420 + T 74 -6.7 -4.36914 | opp_overlap 146383, overlap 146396 TAGCCAAACGCACTG TGTTGGGGCGCCC ACAAG GGGCGCCTTTCCA TTTTCTCCCAAGACC TERM 126 146396 - 146414 + T 86 -13.1 -3.96705 | opp_overlap 146383, overlap 146390 AACGCACTGTGTTGG GGCGCCC ACAAG GGGCGCC TTTCCATTTTCTCCC TERM 127 146539 - 146561 + T 75 -7.6 -4.2828 | opp_overlap 146537 146538, overlap 146548 TAACTCTGAACAACG CCGGGGGC GCGGGCA GCGCCCGG TTTTCCTGCCTCGCC Rcas_0124 149102 - 146793 - | ribonucleoside-triphosphate reductase TERM 128 148096 - 148085 - G 76 -5.8 -4.56597 | CCTGCCGCGCAAAAA TGCG GTTG CGCA CAAAGTCGAGCATGG TERM 129 148951 - 148962 + g 72 -7.2 -4.18494 | opp_overlap 148940 148950 148951 AAACTGGCGAAACAG CGCG CCAT CGCG TTTTCGATCCGCGTC TERM 130 149399 - 149380 - H 88 -3.6 -5.46706 | AGGGGAAAAGAAAAA CTTTACAA CTGA TAGTAAAG CTGGCGACCGATGAA TERM 131 152146 - 152090 - g 74 -14.9 -2.52543 | opp_overlap 152089, overlap 152107 152134 ATGTCTGGGAATGGA CGGCGAGCAGCACCGAAGCAGCGCC TGGACGC GGCGCTGCAACAGGGCAGCGCACCG CTCTGTCACGCCTCT Rcas_0125 149995 - 152340 + | hypothetical protein Rcas_0126 153079 - 154194 + | glycosyl transferase group 1 Rcas_0127 154959 - 154198 - | hypothetical protein Rcas_0128 156293 - 154992 - | putative PAS/PAC sensor protein TERM 132 155555 - 155566 + g 90 -2.2 -5.4833 | AGGTAACGCGCCCGT TCGC CTCG GTGA TTTTTTCTTCGATGC TERM 133 155684 - 155655 - G 76 -5.6 -4.56597 | TTCTTCCGGCAAAAA GAGGTCGTGGTC GGTCTT GCCCTCAACCTC ATCGACCGAAATGCC Rcas_0129 158132 - 156492 - | amino acid permease-associated region Rcas_0130 158801 - 158151 - | cyclase family protein Rcas_0131 159808 - 158825 - | metallophosphoesterase Rcas_0132 160545 - 159811 - | hypothetical protein TERM 134 160465 - 160452 - G 73 -8.1 -4.05389 | GACAGAGATGATAAA TGGCG ATGC CGCCA AGCAATCGCAGGCTG TERM 135 160715 - 160694 - R 76 -8.7 -4.11484 | opp_overlap 160710 TTCAAGCGGTCAAAA TCGCCGGAT CGCA ATCCGGGGA AATCTCGCTTCGTCC Rcas_0134 162653 - 162033 - | hypothetical protein TERM 136 162909 - 162887 - R 79 -16.2 -2.78384 | overlap 162867 CTGCCCGTCAGCACA GGGGCGCGGC AGC GCCGCGCCCA TCAGCGTAGGGGCAA Rcas_0135 165153 - 162982 - | heavy metal translocating P-type ATPase Rcas_0136 165939 - 165154 - | transcriptional regulator, TrmB TERM 137 165730 - 165744 + g 73 -3.5 -4.7254 | ATCGGGCGACACCGG GCGAT AGAGC GTCGC TTTTTCATCGAAGCT Rcas_0137 166012 - 166902 + | glycosyl transferase family protein TERM 138 167216 - 167238 + GF 70 -3.4 -4.64423 | opp_overlap 167213 167212, overlap 167218 GGCGCGAAATATTGG CATCACCTAT GCC AGAGGTGATA TTTGTGTTTTTCTTG Rcas_0138 167013 - 167894 + | glycosyl transferase family protein TERM 139 168098 - 168084 - g 81 -7 -4.71426 | TCGGCATCAAGAAAA CCGGGG CTT CGCCGG AGGCGTCAATCCCGC TERM 140 168433 - 168453 + G 74 -2.5 -4.91109 | overlap 168436 GTATTTGAGCGGATC GGACTGTTT GAC GAACGGTAC TTTTTCTACTACGAA TERM 141 168591 - 168610 + G 80 -4.9 -4.86731 | overlap 168592 TCTGCGCGAGTTCTA CCTGGCG CGCAGT CGCCAGA TTTTCTTTCGCAAGA Rcas_0139 167869 - 168828 + | glycosyl transferase family protein TERM 142 168880 - 168914 + G 75 -4.2 -4.72986 | TCTGGGAGGTGCTAC GATCACGCCGATGG CAGTGGA CCCTGGGAGTGATC TTTTTCCTGGCAATC Rcas_0140 168816 - 169763 + | hypothetical protein TERM 143 169943 - 169970 + G 70 -12 -3.25073 | overlap 169942 TGCGCTACGGTCCAG GCGTGGACGTCC TGCT GGATCTCCACGC TCTTGGTCTTGCAGA Rcas_0141 169771 - 170454 + | methyltransferase type 11 TERM 144 170783 - 170800 + G 76 -9.8 -3.86015 | CGATTGCTTGATGTT GGCGCC GGAGCG GGCGCC TTTCTACGAGCAATG Rcas_0142 170468 - 171397 + | methyltransferase type 12 Rcas_0143 171624 - 173141 + | hypothetical protein TERM 145 173170 - 173198 + T 93 -15.4 -3.51597 | gap 1, opp_overlap 173170 GGGCTTTTCGAGAGA CGACCTGGAAGCG AAAA CGCT-CCAGGTCG TTATCCTTAACGCTT TERM 146 173198 - 173170 - T 81 -15.4 -2.87132 | gap 1, opp_overlap 173170 GGGCTTTTCGAGAGA CGACCTGGAAGCG AAAA CGCT-CCAGGTCG TTATCCTTAACGCTT Rcas_0144 174078 - 173212 - | hypothetical protein TERM 147 173511 - 173501 - G 74 -2.4 -4.89838 | overlap 173505 TCAAGAAAGAGAAAA GGAG CAT CGCC ACCGCTGACAATTGT Rcas_0145 175461 - 174097 - | LuxR family transcriptional regulator TERM 148 176390 - 176349 - g 90 -2.1 -5.47218 | gap 1, opp_overlap 176349, overlap 176351 TGTCACGCAAAAAAA GTCGACCGTTGCCAGCGAGC GCG ACCC-CTGGGAACGTGCGGC GTTTGCACTCCGGCA Rcas_0146 176009 - 176964 + | transposase TERM 149 177225 - 177245 + T 70 -12.5 -2.89564 | GGGCTTCAGCCCGAC CCGTGCGGC TGA GCCGCACGC TCTCTGAGCTGCGGG TERM 150 177320 - 177266 - T 86 -13.4 -3.53224 | opp_overlap 177258 177287, overlap 177313 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACATGGAAGCCCC GCA GGGGCTTTCACGAACGCAGCGAGGGC TTCAGCCCGACCCGT TERM 151 177287 - 177299 + T 70 -10.5 -3.53012 | opp_overlap 177266 GCTCAGGACATGGAA GCCCC GCA GGGGC TTTCACGAACGCAGC TERM 152 177332 - 177352 + T 70 -12.5 -2.89564 | opp_overlap 177313 GGGCTTCAGCCCGAC CCGTGCGGC TGA GCCGCACGC TCTCTGAGCTGCGGG TERM 153 177427 - 177373 - T 86 -13.4 -3.53224 | opp_overlap 177365 177394 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACATGGAAGCCCC GCA GGGGCTTTCACGAACGCAGCGAGGGC TTCAGCCCGACCCGT TERM 154 177394 - 177406 + T 70 -10.5 -3.53012 | opp_overlap 177373 GCTCAGGACATGGAA GCCCC GCA GGGGC TTTCACGAACGCAGC TERM 155 177440 - 177458 + T 83 -16 -3.06796 | GGCTTCAGCCCGACC CGTGCGGC TGA GCCGCACG TTCGCTGAGCTACGG TERM 156 177501 - 177513 + T 70 -10.5 -3.53012 | opp_overlap 177480 GCTTGAGACCTGGAA GCCCC GCA GGGGC TTTCACGAACGCAGC TERM 157 177658 - 177676 + T 93 -16 -3.50393 | GGCTTCAGCCCGACC CGTGCGGC TGA GCCGCACG TTCTCTGAGCTGCGG TERM 158 177862 - 177808 - T 93 -15.6 -3.53224 | opp_overlap 177800 177808 177829, overlap 177851 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACCTGGAAGCCCC GCA GGGGCTTTCACGAACTCAGCGAGGGC TTTAGCCCGCAGTGC TERM 159 177808 - 177862 + T 100 -20 -3.53444 | opp_overlap 177808 177851, overlap 177800 177829 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACCTGGAAGCCCC GCA GGGGCTTTCACGAACTCAGCGAGGGC TTTAGCCCGCAGTGC TERM 160 177829 - 177841 + T 70 -10.5 -3.54424 | opp_overlap 177808, overlap 177808 GCTCAGGACCTGGAA GCCCC GCA GGGGC TTTCACGAACTCAGC Rcas_0147 179944 - 178073 - | hypothetical protein TERM 161 178471 - 178440 - G 71 -4.9 -4.46212 | overlap 178441 GTTCCCACCACAAAA CGGGCGTCGGGCG GCGTGG CGCGCGCTGCCCA CTCGATCGCTACCAG TERM 162 178939 - 178923 - G 77 -13.7 -3.32963 | ATGTGCATGGCAGAA CTGCCGG TTC CCGGCAG TATGCGACTCGCCAT Rcas_0148 181018 - 180272 - | hypothetical protein TERM 163 180327 - 180385 + g 77 -13 -3.61398 | overlap 180330 180339 GACTGGCGTGGTTCG GATTGGCGCGGCTCCGAGATGCGCGGCT CCG AGATGCGCGGCTCGGATTTGCGTCGCTC TTCTTCCAGGGCGCG TERM 164 180339 - 180373 + g 81 -12.8 -3.68506 | overlap 180330 180327 TCGGATTGGCGCGGC TCCGAGATGCGCGGCT CCG AGATGCGCGGCTCGGA TTTGCGTCGCTCTTC Rcas_0149 181191 - 181418 + | hypothetical protein TERM 165 181983 - 181997 + G 74 -9.2 -3.96148 | overlap 181980 TTTGTGAGTATGGCG CCGGCG CTG CGCTGG TTTCTGGTCAGCGCA TERM 166 182016 - 182056 + G 81 -7.4 -4.46212 | gap 1 CTGGTCAGCGCAACG CTGCCGCCGGACGCC-GAG ACGC CACAGGGGTCCATCGGCAG TTTTCTGGTCGAAGC TERM 167 182127 - 182155 + G 72 -13.9 -2.78606 | overlap 182124 182121 TCGTTGAGTCTGCGG TCGAGCGCGAGTT ACG ATCTTGCGCTCGA TGATGTGTTCGTTCC Rcas_0150 181497 - 182681 + | acyl-CoA dehydrogenase domain-containing protein Rcas_0151 182684 - 183430 + | short-chain dehydrogenase/reductase SDR Rcas_0152 183619 - 184023 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 168 184644 - 184701 + G 89 -14.9 -3.90318 | gap 1, opp_overlap 184635 184666 184669, overlap 184648 184650 GGTAAAGCGGCGCCA CGTGTGGCAACCGCCTACGAGAGCAGCC AGC GACTGCTTTCGT-GGCGATTGCTGTTCG TTTCTACCATCATCA TERM 169 184648 - 184697 + G 86 -15.1 -3.61244 | gap 1, opp_overlap 184635 184666 184669, overlap 184644 184650 AAGCGGCGCCACGTG TGGCAACCGCCTACGAGAGCAGCC AGC GACTGCTTTCGT-GGCGATTGCTG TTCGTTTCTACCATC TERM 170 184650 - 184695 + G 93 -17.7 -3.37915 | gap 1, opp_overlap 184635 184666 184669, overlap 184648 184644 GCGGCGCCACGTGTG GCAACCGCCTACGAGAGCAGCC AGC GACTGCTTTCGT-GGCGATTGC TGTTCGTTTCTACCA Rcas_0153 184080 - 185060 + | hypothetical protein Rcas_0154 185176 - 186381 + | hypothetical protein Rcas_0155 189435 - 186391 - | multi-sensor signal transduction histidine kinase TERM 171 188645 - 188627 - G 74 -9.6 -3.92178 | ATGACGCCAATCAAA CGCTCATC GGC AATGAGCG GCACACCAAGCCAGG TERM 172 189080 - 189034 - G 71 -9.3 -3.69684 | AAAGTTACCCAACAA CGCCAGTGCAGGACCTGCCTG TGCGG CAATCAGTTCCAGCAGCGGCG CCAGATCGGGCGACC Rcas_0156 189580 - 190644 + | eIF-2B alpha/beta/delta-related uncharacterized protein Rcas_0157 190648 - 191688 + | hypothetical protein TERM 173 192419 - 192473 + G 83 -17.1 -2.52676 | gap 1 CCATGAGGTCTACGA TGTGCCGCCGGCGCCGGTT-GAGCGA GTGG TCGATCCGACCGGCGCCGGCGATGCC TACCTTGGCGGACTC Rcas_0158 191700 - 192683 + | ribokinase-like domain-containing protein TERM 174 192787 - 192751 - f 75 -7.8 -4.21936 | opp_overlap 192750, overlap 192753 GGTAGAATGGCAAAA GATGCGTCGCCAGCGG GCGAT CCGCTGGCTGCGCAGA GTGATTGCACACGAT TERM 175 192785 - 192753 - f 90 -14.8 -3.70689 | opp_overlap 192750, overlap 192751 TAGAATGGCAAAAGA TGCGTCGCCAGCGG GCGAT CCGCTGGCTGCGCA GAGTGATTGCACACG Rcas_0159 192826 - 194088 + | S-adenosyl-L-homocysteine hydrolase TERM 176 194926 - 194945 + G 76 -9.2 -4.07568 | opp_overlap 194915, overlap 194927 CATACGGCGGCATGG CGCGCCAC GGCG GTGGCGCC TTTTCGGGCAAAGAC TERM 177 194927 - 194944 + G 71 -12.7 -3.04398 | opp_overlap 194915, overlap 194926 ATACGGCGGCATGGC GCGCCAC GGCG GTGGCGC CTTTTCGGGCAAAGA Rcas_0160 194100 - 195317 + | methionine adenosyltransferase Rcas_0161 195890 - 196753 + | hypothetical protein TERM 178 196873 - 196837 - f 79 -12.4 -3.53563 | gap 1, opp_overlap 196840 196844, overlap 196842 ATAGCGGCGCCGAAA CTCAAGAGCCGAGACAA TGAC TCGTCTCGGCTCT-GTG CATTGCGCAACTCAA TERM 179 196869 - 196842 - f 89 -16.4 -3.27525 | opp_overlap 196840 196844, overlap 196837 GGCGCCGAAACTCAA GAGCCGAGACAA TGAC TCGTCTCGGCTC TGTGCATTGCGCAAC TERM 180 198407 - 198392 - f 84 -9 -4.57837 | opp_overlap 198394 ACACTGGCGCAAAAA CAGGAC CATC GTCCTG CGTTCAACGCACGAG Rcas_0163 198519 - 199694 + | glucose sorbosone dehydrogenase Rcas_0164 200991 - 199681 - | ABC transporter related TERM 181 200934 - 200950 + g 72 -2.1 -4.74103 | overlap 200935 GTTTCTCGCCGCGCC CGTAGCG TTG CGCAACA TTTTTCAGTTCGACC Rcas_0165 202734 - 201010 - | binding-protein-dependent transport systems inner membrane component TERM 182 203889 - 203860 - g 81 -12.1 -3.91084 | gap 1, overlap 203848 GCACGCCGAACGAAA CGCGGCGGTCGCCG ATG CGG-AACGGCCGCG TCGGCGTGAACAGGA TERM 183 204001 - 203981 - g 75 -4 -4.72486 | gap 1, overlap 203982 203983 203985 CAGAAAGGTGAAAAA GTGACAGAG ACAA CTCTGCC-C GAACTCGACGAAGCG Rcas_0166 203138 - 204808 + | pseudouridine synthase TERM 184 204879 - 204934 + T 83 -17.4 -2.55351 | opp_overlap 204918, overlap 204879 204922 TGGCTCGTTGTCATG CCGCGCGCAGCGACGCATCTCGGCGA GTGA TCACCGAAACGCAGCGCTGCGCGCCG GTTACTCTGCGGGCA TERM 185 204879 - 204935 + T 89 -17.2 -3.25823 | gap 1, opp_overlap 204918, overlap 204879 204922 TGGCTCGTTGTCATG CCG-CGCGCAGCGACGCATCTCGGCGA GTGA TCACCGAAACGCAGCGCTGCGCGCCGG TTACTCTGCGGGCAG TERM 186 204957 - 204918 - T 100 -20.7 -3.68827 | opp_overlap 204879 204879 204922 GAGTGATCACCGAAA CGCAGCGCTGCGCGCCG GTTACT CTGCGGGCAGCGCTGCG TTCAACGCGGAGTGG TERM 187 204922 - 204953 + T 72 -13.6 -2.52464 | opp_overlap 204918, overlap 204879 204879 GATCACCGAAACGCA GCGCTGCGCGCCGG TTAC TCTGCGGGCAGCGC TGCGTTCAACGCGGA Rcas_0167 205588 - 204959 - | SCP-like extracellular TERM 188 205842 - 205789 - R 82 -14.6 -3.21199 | gap 3 CAGCGAGGAATCTAA CCGCGC-GCAGCGAGGAATCG-GAGCG GGT CGCGCACGACCCCTCGC-GCTGCTCGG GGTGACCATGCCGGA Rcas_0168 206967 - 205885 - | DNA protecting protein DprA Rcas_0169 207900 - 207046 - | spermidine synthase-like protein TERM 189 207459 - 207433 - G 79 -10.8 -3.89346 | opp_overlap 207428 207433 CGTCGATTGGAGAAA CGCCTGCGCATC GGC GATGTGGAGGCG CTGCCGTTCGTCGAA Rcas_0170 209674 - 207908 - | hypothetical protein TERM 190 210095 - 210048 - g 75 -11.8 -3.61398 | gap 1 CGCTTTCCTGAAGAA GCTGCCGCGCGCTTCGCCGATGC GTT GCACGGGCGG-GCGCAGGGCGGC GAAAGCCTCGCTGAA Rcas_0171 209736 - 210353 + | phosphoglycerate mutase Rcas_0172 210786 - 210451 - | small multidrug resistance protein Rcas_0173 210820 - 211626 + | cobalamin 5'-phosphate synthase TERM 191 211723 - 211776 + T 100 -21.7 -3.17392 | gap 1 AAAGGCATGGTCACC CCGAGCGGAGCGAGGGGTCGTGCGCG TCC CGCTC-CGATTCCGCGCTGCGCTCGG TTAGATTCCGCGCTG Rcas_0174 212434 - 211949 - | hypothetical protein Rcas_0175 212519 - 213286 + | hypothetical protein Rcas_0176 213829 - 213383 - | hypothetical protein TERM 192 213683 - 213720 + g 71 -9.2 -3.72893 | gap 1, opp_overlap 213674 213682 213683 213706 213716 213717, overlap 213635 CGAAAAGCCGATAAC CGCCGGTTTCCCGGC TGGAATGAT GCCGGCAAA-CGGCG TTTCGTGCGCCAGTG Rcas_0177 214373 - 213927 - | hypothetical protein Rcas_0178 214755 - 215741 + | hypothetical protein Rcas_0179 215738 - 217084 + | hypothetical protein Rcas_0180 217090 - 217428 + | hypothetical protein Rcas_0181 217680 - 218657 + | NAD-dependent epimerase/dehydratase TERM 193 219189 - 219201 + G 73 -6.9 -4.37092 | opp_overlap 219173, overlap 219173 CGCCGCGCTGGGAAG CGGTG CTG CGCCG TTTTCTGGCAGCGAT Rcas_0182 218663 - 219784 + | glycoside hydrolase family protein TERM 194 220626 - 220588 - T 70 -5.1 -4.45083 | gap 1, opp_overlap 220609 220623, overlap 220595 220596 CTGAGACTGATAAAA CCATCAAGCGCGC-CGCG TATG CGCGTGCAGGCGTGCCGG AATACTGGATTGTGC Rcas_0184 221768 - 220980 - | RNA-binding S1 domain-containing protein Rcas_0185 222952 - 221993 - | hypothetical protein Rcas_0186 223425 - 222949 - | hypothetical protein Rcas_0187 224489 - 223422 - | hypothetical protein Rcas_0188 225348 - 224482 - | CRISPR-associated Csm3 family protein Rcas_0189 225802 - 225338 - | hypothetical protein Rcas_0190 226958 - 225783 - | hypothetical protein Rcas_0191 227602 - 226958 - | hypothetical protein TERM 195 227252 - 227212 - G 75 -12.4 -3.54488 | overlap 227210 TTTCCTGAAACAACA GGCGCTCATCCTCCGCCG TGCCG CGCCGCCGGTTGAGCGCC ACGCTGGGGCGGATC Rcas_0192 229766 - 227583 - | hydrolase TERM 196 228079 - 228098 + g 73 -11.4 -3.58037 | opp_overlap 228078 TGTCCGGTCAAGGAG CGCGCCAG TTTC TTGGCGCG TTTGAGCAATTCCTC TERM 197 230102 - 230116 + r 89 -6.4 -5.07053 | TTCCTTTGCGTCCTT CGTGGA TAG TTCACG TTTTTTCACATGCTT Rcas_0193 231206 - 230217 - | hypothetical protein TERM 198 231309 - 231344 + H 72 -14 -2.65354 | gap 1, overlap 231304 231305 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCGCGC TGAGTTTACCCTGAG TERM 199 231691 - 231673 - H 78 -13.8 -3.18264 | opp_overlap 231677, overlap 231658 231674 CCCCGCACGCAGCAA CGCGGGCG GCG CGCCCGCA CACGTCGTGGCGGAT TERM 200 231690 - 231674 - H 76 -15.1 -2.50816 | opp_overlap 231677, overlap 231658 231673 CCCGCACGCAGCAAC GCGGGCG GCG CGCCCGC ACACGTCGTGGCGGA TERM 201 231723 - 231746 + H 91 -6 -5.40072 | gap 1 TCCGTCGCCTCCTCT GCCAGACGG CGCCATC CCGTC-GGC TTTTTTTCAGACACA TERM 202 232302 - 232312 + G 71 -8.2 -3.88291 | GGGCCCAGCGTGTTT GGGC CTT GCCC TTTCTGACCGTCCTG Rcas_0194 231851 - 233209 + | hypothetical protein Rcas_0195 234803 - 233235 - | hypothetical protein TERM 203 234127 - 234112 - GT 70 -3.2 -4.65078 | AGACCGGCAAGAAAA GCCAGA CCCA TCCAGC CAGCGGCTATGACCA TERM 204 234654 - 234636 - GT 73 -10.2 -3.60627 | CGACGCCAGTTGAAA CTCCGCCG GGT CGCCGGAG AGCACATCGGGCGCC Rcas_0196 236122 - 234776 - | peptidase M20 TERM 205 236064 - 236034 - GH 72 -14.1 -2.62263 | gap 1 ACGGCGCGTAGATCA TCAGCCTGACCAGG GCTG CCCGG-CAGGCTGA TGAGGTGATCGAGAT TERM 206 236806 - 236784 - g 100 -18.4 -3.58037 | opp_overlap 236777 TATGAATTGGCGAAA GCCGCGCCGC CAG GCGACGCGGC AGCCGAATTGCTGGC TERM 207 237579 - 237598 + G 78 -10.6 -4.08394 | opp_overlap 237571 CAAGGGAGCGACGTG CGGCGCGC AATT GCCCGCCG TTTTCAAGCAGATAT Rcas_0197 236232 - 238049 + | extracellular solute-binding protein TERM 208 238234 - 238220 - f 75 -2.8 -4.87626 | GTGGAAGATTAAAAA CTGC CGGGTTC GCAG GGACAAAAGATAATT TERM 209 242004 - 241966 - g 70 -11.7 -3.21924 | gap 2, overlap 241941 241964 241967 TGACGCCTCAGAAGA GCC-G-GCTGCGCCAACGG ATG CCGCCGGTGCAGCGCCGGC GCCGGCAGCGCCGCC Rcas_0198 238604 - 242422 + | DNA polymerase III, alpha subunit Rcas_0199 243553 - 242429 - | nuclease TERM 210 243524 - 243494 - G 85 -15.4 -3.53444 | opp_overlap 243486, overlap 243477 243495 243497 CCAGGCGCGCTGAAA CCATCCCTCCCGGC GTT GCCGGGAGGAACGC TGACGACGTTTTGGC TERM 211 243523 - 243495 - G 87 -18.9 -2.71924 | opp_overlap 243486, overlap 243477 243494 243497 CAGGCGCGCTGAAAC CATCCCTCCCGGC GTT GCCGGGAGGAACG CTGACGACGTTTTGG TERM 212 243521 - 243497 - G 90 -17.9 -2.90496 | opp_overlap 243486, overlap 243477 243495 243494 GGCGCGCTGAAACCA TCCCTCCCGGC GTT GCCGGGAGGAA CGCTGACGACGTTTT Rcas_0200 244752 - 243637 - | histidinol-phosphate aminotransferase TERM 213 244876 - 244933 + r 71 -7.6 -4.08767 | gap 2, overlap 244880 TATATGCGGCATTCC GGGGCGGCGG-GGCGCCGTG-CGTTGGC GCTC GCTGAGGCCATTTCGCCGCCGCTGCTCC TTTTCGGGGGCTGCC TERM 214 244938 - 244958 + r 89 -12.5 -4.07568 | GCCGCTGCTCCTTTT CGGGGGCTG CCC CACCCCCCG TTTTGGGCGACCGGC TERM 215 245527 - 245541 + r 77 -3.4 -4.96646 | GTAATTGGTATAAGT CCGTCG TAA TGCCGG TTTTTCCTTATCTAC Rcas_0201 247930 - 245549 - | laminin G, domain-containing 2 Rcas_0202 248862 - 249635 + | glycosyl transferase family protein Rcas_0203 249681 - 250685 + | NAD-dependent epimerase/dehydratase TERM 216 251280 - 251270 - g 74 -2.4 -4.88407 | opp_overlap 251270 CTACCCAACCAAAAA CCTC GGC GCGG TTGGTGATGGCGGCG Rcas_0204 250704 - 251861 + | glutamine--scyllo-inositol transaminase TERM 217 252277 - 252287 + G 76 -8.2 -4.14511 | overlap 252276 GTTGACATCGGCAAG CGCG ATG CGCG TTTTGCGATCGGGTT TERM 218 252800 - 252837 + G 74 -9.1 -3.92832 | gap 1, opp_overlap 252830, overlap 252777 252821 TTGCGCTGCTGATAG CGGCAG-GTATCTGGCTG CGC CCGCTGGAAACGCTGCCG TTCTTTCAGCGATTT TERM 219 253814 - 253792 - g 79 -13.4 -3.50572 | opp_overlap 253790 253789 ACCTATCTGACACAA GTGCTGCCGA ACA TCGGCGGCAC GACTTCGTGGGTCGA TERM 220 254159 - 254189 + G 74 -5.4 -4.62069 | overlap 254160 CGGTGGCGATCAGTT TTGCGCTCATTGCC TAT GGCAATCAGTGGAG TTTTTACGATGGAAC Rcas_0205 252151 - 254355 + | hypothetical protein Rcas_0206 254408 - 254932 + | OsmC family protein Rcas_0207 256603 - 255080 - | inosine-5'-monophosphate dehydrogenase TERM 221 255182 - 255170 - G 85 -10.5 -4.36433 | opp_overlap 255169 255177 CGAAATACGAATAAA GCGCG CCT CGCGC CGCATCGTCTCGATG TERM 222 256618 - 256590 - G 100 -15.4 -4.67982 | gap 1, overlap 256592 GTGCAGGGAATAAAA GACCCTCTGCGCA TTGC TGCGCAGAGGG-C AAGGTGACATCCGCC TERM 223 256617 - 256592 - G 100 -19.1 -3.95554 | overlap 256590 GCAGGGAATAAAAGA CCCTCTGCGCA TTGC TGCGCAGAGGG CAAGGTGACATCCGC Rcas_0208 258535 - 256814 - | hypothetical protein TERM 224 257590 - 257548 - G 95 -17.7 -3.41527 | gap 1 CAATCGTCACGACAA TGGCGAGCGCGAAGC-CGAC ATTC GCCGCGCTGCGCGCACGCCA TATCGCCGTGATAAT TERM 225 258083 - 258063 - G 81 -6.7 -4.67697 | CTGTAAAACAACAAA GGCGATGTC AAC GTCAGCGCC AGAGCCGAGAGCAAC TERM 226 258654 - 258600 - H 70 -12.1 -2.89569 | overlap 258602 CCCGGAAATCAAGGA CATGGAGCGGCTAACGTTGGCTTCG ACAGG CTCAGCCAACGTCAGCCGCAAGATG GTCAACACCGGCAAT TERM 227 258751 - 258718 - H 72 -13.9 -2.66695 | overlap 258720 258725 GTTCTCACCAAACAC CACAAAACCGTCCCC TTCC GGAGACGGTTCCGCG CGCCAGAGATGGTAT TERM 228 258749 - 258720 - H 70 -12.9 -2.87501 | overlap 258718 258725 TCTCACCAAACACCA CAAAACCGTCCCC TTCC GGAGACGGTTCCG CGCGCCAGAGATGGT TERM 229 258744 - 258725 - H 95 -11.4 -4.58303 | overlap 258720 258718 CCAAACACCACAAAA CCGTCCCC TTCC GGAGACGG TTCCGCGCGCCAGAG Rcas_0209 258894 - 259826 + | 1-phosphofructokinase TERM 230 260882 - 260897 + G 74 -10.4 -3.78775 | AAGCATTGGCGGAAC CGGTGC TGGC GCACCG TTTGATCATCAACCC Rcas_0210 259981 - 261024 + | ATPase Rcas_0211 261710 - 261027 - | two component LuxR family transcriptional regulator TERM 231 261960 - 261921 - H 71 -5.7 -4.38876 | opp_overlap 261947 261948, overlap 261922 261923 261925 TCAAAAATACACAAA CTCATCATAGCACACCC TTCCCC GGACGTGCTATGGTGCA TGCGCATGTTTCTGA TERM 232 262032 - 262054 + G 76 -11.2 -3.69323 | opp_overlap 262032 TCGCTCTCCCAACTA TGGGTCGCGC GGC GGGCGGCCCA TTTCGATGATCGTCC TERM 233 262239 - 262194 - g 70 -11.7 -3.13403 | gap 1, overlap 262192 GGTGCCCGATGAATA CGCTGCCT-GGCACGCCGGGCG CGC CGCCTGGCGTGGTGAGACGGCG ATCAATGAGGTGTCG Rcas_0212 261991 - 263247 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Rcas_0213 263360 - 264742 + | hypothetical protein Rcas_0214 264776 - 265093 + | hypothetical protein TERM 234 267763 - 267779 + G 71 -11.5 -3.40403 | ATGCGCCGACTATGC GCGCGCC GCC GGTGCGC TTCTCCTGCGGCGCG Rcas_0215 265160 - 271948 + | TPR repeat-containing protein TERM 235 274446 - 274431 - g 70 -10.4 -3.58269 | overlap 274434 GAACGGATGCCCAAA CCACGC GCGC GCGTGG TGCTCGACGAGGCGG Rcas_0216 272115 - 274709 + | TPR repeat-containing protein Rcas_0217 275689 - 274988 - | hypothetical protein TERM 236 275870 - 275902 + r 95 -13.4 -4.08064 | CGATTTTCCCCCTCA TCCCCCCTTCTCCC ACAAG GGGCGAAGGGGGCA TTTTCGCGGCGGGTT Rcas_0218 277459 - 276017 - | glycosyl transferase group 1 TERM 237 277029 - 277010 - G 76 -10 -3.8698 | overlap 277025 277026 GAACGGAAAGTCAAA GGCGGCTT CAGG AAACCGCC CACGCAGCATCAGTT TERM 238 277171 - 277142 - G 80 -14.3 -3.21099 | overlap 277157 CTCTTGCAGCATGAA GTGGTGCAGCACA AAGT CGTGCAGCACCAC AACGCCAGGGGTGCG Rcas_0219 277938 - 277462 - | NUDIX hydrolase TERM 239 277642 - 277624 - G 70 -10.2 -3.65046 | GCGGCAGGCGAAGAA GGCGCTGA CGA TCTGCGCC TGATCGCCGTTCGGG Rcas_0220 278059 - 278193 + | hypothetical protein TERM 240 278431 - 278451 + G 71 -8.3 -3.91488 | AATCACGATGTTCCG CTGTTTCAC CTG GTGGAACGG TTCTTTCGCCCGCTT Rcas_0221 278200 - 279036 + | metallophosphoesterase Rcas_0222 279033 - 279581 + | hypothetical protein TERM 241 280406 - 280427 + G 73 -8.7 -4.08767 | gap 1, overlap 280407 GGCGACGCCGTATGT G-GCAGCGCT GGC GGCGCTGCTC TTTTCGGCGAATCCC TERM 242 280407 - 280425 + G 75 -12.4 -3.6422 | overlap 280406 GCGACGCCGTATGTG GCAGCGCT GGC GGCGCTGC TCTTTTCGGCGAATC Rcas_0223 279585 - 281126 + | FHA domain-containing protein Rcas_0224 282343 - 281852 - | hypothetical protein TERM 243 281972 - 281984 + g 74 -6.2 -4.41844 | overlap 281970 CAGGTAGAACCAGGG CGGC ATTTC GCCG TTTTGTACCAGTTTT TERM 244 282507 - 282535 + r 73 -10.1 -3.58726 | overlap 282510 282512 CGCACCCCCCCCGCT GCCGGGGCGCGCC AGC GGCGTGCCTCTCC TTCTATCTGGAACGC TERM 245 282510 - 282532 + r 79 -14.8 -2.91997 | overlap 282507 282512 ACCCCCCCCGCTGCC GGGGCGCGCC AGC GGCGTGCCTC TCCTTCTATCTGGAA TERM 246 282512 - 282530 + r 76 -13.8 -3.00907 | overlap 282510 282507 CCCCCCCGCTGCCGG GGCGCGCC AGC GGCGTGCC TCTCCTTCTATCTGG Rcas_0225 283413 - 282538 - | hypothetical protein TERM 247 283370 - 283398 + g 100 -18.1 -3.98214 | CGTTTTGCGGCATTG GCTGCGCGGATGG CGG CCAGCCGCGCGGC TTTCTCATCACTCAT Rcas_0226 284323 - 283406 - | ApbE family lipoprotein Rcas_0227 284790 - 284371 - | hypothetical protein Rcas_0228 285832 - 285008 - | peptidase TERM 248 285906 - 285945 + H 81 -8.1 -4.6856 | gap 1 GTTATACCGTTACTC GATTGGAAGAATC-TTGG AACAC CCGGCGATTTTTCCAATC TTTTTCCAATCTTTC Rcas_0229 285998 - 286681 + | two component transcriptional regulator Rcas_0230 286674 - 288101 + | integral membrane sensor signal transduction histidine kinase Rcas_0231 288729 - 288298 - | cation channel family protein Rcas_0232 289787 - 288729 - | peptidase M42 family protein Rcas_0233 290274 - 290020 - | hypothetical protein TERM 249 290134 - 290110 - G 85 -15.7 -3.53224 | GATCGCGCCGGTAAA GCGGAACGCTG ACG CAGCGTGCCGC GATCGGAAAAAGCCG Rcas_0234 290346 - 291398 + | proline racemase Rcas_0235 292656 - 291520 - | hypothetical protein Rcas_0236 293939 - 292656 - | glycoside hydrolase family protein Rcas_0237 294332 - 293967 - | hypothetical protein Rcas_0238 295053 - 294460 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_0239 295732 - 296388 + | phosphate uptake regulator, PhoU Rcas_0240 296385 - 296666 + | acylphosphatase Rcas_0241 297480 - 296656 - | luciferase family protein Rcas_0242 297647 - 298492 + | hypothetical protein Rcas_0243 298994 - 299434 + | hypothetical protein TERM 250 299442 - 299478 + F 76 -13.1 -3.36452 | gap 1, overlap 299443 TTTGCTGATGACGTT G-TGGGCGCAGGAGTG AAGATG CGTTCCTGCGCCCATC TTCATCTTGAGCGGT TERM 251 299443 - 299476 + F 89 -16.8 -3.25073 | overlap 299442 TTGCTGATGACGTTG TGGGCGCAGGAGTG AAGATG CGTTCCTGCGCCCA TCTTCATCTTGAGCG Rcas_0244 299460 - 300173 + | hypothetical protein TERM 252 300304 - 300349 + T 77 -11.2 -3.59979 | gap 3, overlap 300305 300310 GGCATGGTCACCCCG AGCAGCGCGAGGGGTCGTGCGCG ACC CGCGC-CGA-TTC-CGCGCTGCG TTTACCCTGAGCGAA TERM 253 300305 - 300348 + T 77 -14.7 -2.75844 | gap 3, overlap 300304 300310 GCATGGTCACCCCGA GCAGCGCGAGGGGTCGTGCGCG ACC CGCGC-CGA-TTC-CGCGCTGC GTTTACCCTGAGCGA TERM 254 300310 - 300345 + T 78 -15.4 -2.65354 | gap 1, overlap 300305 300304 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGC TGCGTTTACCCTGAG Rcas_0245 303134 - 300654 - | transglutaminase domain-containing protein TERM 255 302257 - 302235 - G 71 -8.4 -3.87075 | gap 1, opp_overlap 302235 302236, overlap 302236 ATTACGGGTCAGAAA CG-CGCCGG TCGATC CCGGCGGCG CATTGATCGTACTGA Rcas_0246 303907 - 303131 - | TatD family hydrolase TERM 256 304249 - 304276 + G 71 -8.4 -3.90744 | gap 1, opp_overlap 304254 AAGTGTCAGACCGGA TCA-CAGCGCTCG ACT CGGGCGCCGATGA TTATTTGGCCAAGCC TERM 257 304282 - 304292 + G 71 -4.6 -4.52589 | GCGCCGATGATTATT TGGC CAA GCCG TTTTATATCGAGGAA Rcas_0247 303969 - 305192 + | response regulator receiver sensor signal transduction histidine kinase TERM 258 305303 - 305258 - f 77 -11.2 -3.59979 | gap 3, overlap 305259 305262 TTCGCTCAGGGTAAA CGCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGAGTGACCATGCC TERM 259 305302 - 305259 - f 77 -14.7 -2.75844 | gap 3, overlap 305258 305262 TCGCTCAGGGTAAAC GCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGAGTGACCATGC TERM 260 305297 - 305262 - f 78 -15.4 -2.65354 | gap 1, overlap 305259 305258 CTCAGGGTAAACGCA GCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGAGTGAC TERM 261 305582 - 305599 + G 76 -6.9 -4.42653 | opp_overlap 305578, overlap 305579 AAGCGACGAGACCGC CGGCGCG ACGC TGCGCTG TTTTATCACTAACGT Rcas_0248 305352 - 305930 + | uracil-DNA glycosylase superfamily protein Rcas_0249 305927 - 307078 + | acyl-CoA dehydrogenase domain-containing protein Rcas_0250 308346 - 307381 - | hypothetical protein TERM 262 307935 - 307879 - G 91 -17.2 -3.30124 | gap 2 GCCGAGGGTCCAGAA GATCGGCG-CGGCGGCGCG-CCGCGCGG CAG CAGCCCGGTCGCACCGACGACGCAGATC ATCAATGCTTGCCAT Rcas_0251 309870 - 308356 - | peptidase M1 membrane alanine aminopeptidase Rcas_0252 309959 - 310615 + | Crp/FNR family transcriptional regulator Rcas_0253 310955 - 311191 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 263 311217 - 311236 + F 79 -12.8 -3.52073 | CGTTGCGTTGAATGG GGCGCTCC GCAA GGGGCGCC TTATGCTATTCCAGG Rcas_0254 311923 - 312399 + | hypothetical protein TERM 264 313021 - 312991 - g 72 -7.5 -4.20531 | gap 1, overlap 312992 TATATGCACTCAAAA GCCCGGCGCGACAT CACC ATG-CGCGCCTGGG GCACAGCCAGCACGC Rcas_0255 312484 - 313557 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 265 314524 - 314473 - g 84 -11.4 -4.15044 | gap 1, opp_overlap 314475 GCGCTGGTGAAGAAA CTCTCGCACCGGGTGTATCTGGCGC TCG ACGCC-GACACCGCCGGCGCGCGCG CGACGCTCAAGGGGT TERM 266 314688 - 314735 + G 86 -6.8 -4.96848 | gap 1, opp_overlap 314688, overlap 314695 GGTCATTCAGGAAAA TCCGGAGCAGTGGCGCGCGGC GCTGGCA GCGGCGCGCC-CGGCAATGGA TTTTTATATCGAGAC Rcas_0256 313588 - 315546 + | DNA primase Rcas_0257 315712 - 317337 + | RpoD family RNA polymerase sigma factor Rcas_0258 317384 - 318739 + | heat shock protein DnaJ domain-containing protein Rcas_0259 318739 - 319881 + | glycoside hydrolase family 42 protein TERM 267 320071 - 320109 + G 74 -12.5 -3.30159 | gap 1, opp_overlap 320091 320094, overlap 320097 ATAGTTGCCGGCGGC TCG-AGCCGGCGCATG GGAAACGA CAAGCGCCGGCTGCGA TTGTGGAGCGATTGC Rcas_0260 320038 - 320673 + | molybdopterin-guanine dinucleotide biosynthesis protein A-like protein Rcas_0261 320673 - 322208 + | hypothetical protein Rcas_0262 322195 - 323031 + | hypothetical protein TERM 268 323233 - 323189 - T 73 -10 -3.59979 | gap 2, overlap 323190 TTCGCTCAGGGTAAA CGCAGCGCG-GAATC-TGAGCG GGT CGCGCACGACCCTCGCGCTGCT CGGGGTGACCATGCC TERM 269 323232 - 323190 - T 73 -13.5 -2.75844 | gap 2, overlap 323189 TCGCTCAGGGTAAAC GCAGCGCG-GAATC-TGAGCG GGT CGCGCACGACCCTCGCGCTGC TCGGGGTGACCATGC TERM 270 324439 - 324451 + T 76 -10.5 -3.74693 | CCGGTTTGCGGTCCA GCCCC GCA GGGGC TTTCATGCCCTCAGC Rcas_0263 326192 - 324618 - | D-3-phosphoglycerate dehydrogenase TERM 271 326917 - 326963 + r 78 -15.9 -2.56046 | gap 1, opp_overlap 326931, overlap 326931 GGCGCACCCTGTGTT TG-ACCGGGCAGCAAGGCGATC CTGG GACCGCCTTGCTGCCCGATGCC TCCATTACCCTTTGA Rcas_0264 329346 - 326968 - | regulator of chromosome condensation RCC1 TERM 272 329672 - 329730 + H 76 -15.3 -2.62463 | gap 2, overlap 329678 GGCGATCCCCGCAGG GCG-GTCGGTGAGCGGGGGCGG-AGCGCG GCA CGCGCTGCTGCGCTCGCTTGCCGATACCC CTTCTGCATCCTGGC Rcas_0265 330058 - 332067 + | TAP domain-containing protein Rcas_0266 333636 - 332392 - | hypothetical protein Rcas_0267 334476 - 333643 - | ABC transporter related Rcas_0268 336305 - 334542 - | RND family efflux transporter MFP subunit TERM 273 334632 - 334659 + g 74 -9.8 -3.72324 | overlap 334646 AATGCCAACCTCGAC CGGCTGCGCAAC CAGA GTTGTGCGCCCG TTGTTGGTGACAATC Rcas_0269 337017 - 336394 - | TetR family transcriptional regulator TERM 274 336678 - 336713 + g 73 -12.6 -3.16676 | gap 1, overlap 336673 GCTCCGGGTTCAGGT GC-TCACGCGCCTGATG ACG CATCATGCGCGTGTCGC TGTTGGGTTCATGGA Rcas_0270 337820 - 337614 - | hypothetical protein Rcas_0271 338101 - 337817 - | hypothetical protein TERM 275 338372 - 338331 - R 76 -10.2 -3.80625 | gap 1 CTGCGACAACGGAAA GAGGGCG-CCAAGACGCGA CCCAT CCGCATCTCAAACGCCCTC CCAAACATTGGTTAC Rcas_0272 339958 - 338405 - | aldehyde dehydrogenase Rcas_0273 340355 - 339936 - | hypothetical protein Rcas_0274 340472 - 341791 + | extracellular solute-binding protein Rcas_0275 342152 - 342592 + | hypothetical protein Rcas_0276 342589 - 344184 + | hypothetical protein TERM 276 344718 - 344689 - T 85 -18.7 -2.53382 | gap 1 ATCACGGCGAAGGCA CAGCGTGAGGGGTG ACG CACCCCTCACGC-G CGCCGTCGGCGGGGC Rcas_0277 345023 - 344712 - | hypothetical protein TERM 277 345086 - 345062 - R 100 -9.3 -5.03747 | opp_overlap 345062 AAATCCGGTAAAAAA GAAGGACGC TTCGACT GCGCCCTTC TTTTCGATCTATTCT TERM 278 345062 - 345086 + r 74 -7.1 -4.28977 | opp_overlap 345062 AAATCCGGTAAAAAA GAAGGACGC TTCGACT GCGCCCTTC TTTTCGATCTATTCT Rcas_0278 345454 - 345122 - | XRE family transcriptional regulator TERM 279 345949 - 346000 + G 83 -15 -3.53012 | gap 1 GCGATGCTGAGTTGA TCCGCGCGTTCAACGGCGCAGTGCG CGC CGCGCTGCGCCGCGTTGCGC-CGGA TTTCCCCCCGCCGGC Rcas_0279 345633 - 346259 + | hypothetical protein TERM 280 346308 - 346330 + F 81 -16.4 -2.95116 | opp_overlap 346303 346306 346305, overlap 346305 346310 GTGTGCAAAACAGGG CATCCATGCC AGG GGCATGGATG TGGTTTGGATGATGG TERM 281 346310 - 346328 + F 76 -13.2 -3.02591 | opp_overlap 346303 346306 346305, overlap 346308 346305 GTGCAAAACAGGGCA TCCATGCC AGG GGCATGGA TGTGGTTTGGATGAT Rcas_0280 346410 - 346775 + | TraR/DksA family transcriptional regulator TERM 282 346811 - 346848 + F 74 -12.7 -3.12895 | gap 1, opp_overlap 346813, overlap 346808 ACGGGCGGGCGCCAA CAGCCCCTTGCGG-TTCG GTG CGATTCCACAGGGGGCTG TCTGTTCATGCGCAA Rcas_0281 347333 - 347908 + | lipoprotein signal peptidase Rcas_0282 348141 - 349088 + | RluA family pseudouridine synthase TERM 283 349201 - 349159 - f 73 -9.9 -3.59979 | overlap 349160 349163 349191 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACAACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 284 349200 - 349160 - f 73 -13.4 -2.75844 | overlap 349159 349163 349191 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACAACCCCTCGC-GC TGCTCGGGGTGACCA TERM 285 349198 - 349163 - f 76 -14.8 -2.65354 | gap 1, overlap 349160 349159 349191 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACAACCCCTCGC GCTGCTCGGGGTGAC TERM 286 349640 - 349598 - f 88 -13.5 -3.59979 | overlap 349599 349602 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 287 349639 - 349599 - f 84 -17 -2.75844 | overlap 349598 349602 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 288 349637 - 349602 - f 85 -18.4 -2.65354 | gap 1, overlap 349599 349598 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_0283 349705 - 350634 + | malate dehydrogenase, NAD-dependent TERM 289 350731 - 350744 + F 72 -2.3 -4.74285 | overlap 350732 CATATGTGATGTGTG AGCGT CTCG ACGCC TTTTGTGTTGTACCT TERM 290 351726 - 351714 - g 71 -9.1 -3.73224 | TGACGCTTGACGAAA GCCAG AAA CTGGC GCCGTATACGTGTGG TERM 291 352552 - 352526 - g 73 -6.6 -4.323 | gap 1, opp_overlap 352545 352547, overlap 352517 CTGAAACACGCAAAA GCGCAG-CACA TCTGGG TGCGCCTGCGC CAGACGCCAACGACG Rcas_0284 350981 - 352756 + | multi-sensor signal transduction histidine kinase Rcas_0285 352753 - 353661 + | dimethyladenosine transferase Rcas_0286 354769 - 354092 - | HAD family hydrolase Rcas_0287 356029 - 354791 - | cell envelope-related transcriptional attenuator TERM 292 355118 - 355097 - G 74 -9.4 -3.85698 | opp_overlap 355097 GGGTGTCGCCAGAAA GGTGCGCA CCACCC CGCGCACC TCCTCTGGGTCCCAA Rcas_0288 356838 - 357866 + | metallophosphoesterase TERM 293 358275 - 358242 - f 81 -13.8 -3.2963 | opp_overlap 358263 358263 358273 AGGAGGGGGCGAGAA GCGCGAGGCGAGGG ACCCGA CCATCGCGTCGCGC GAGATGTATCTCGCA TERM 294 358410 - 358452 + F 82 -12.7 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC TGCGC-CGATTCCGCGCTGCG TTTACCCTGAGCGAA Rcas_0289 358610 - 359035 + | hypothetical protein Rcas_0290 359131 - 359793 + | phosphoglycerate mutase Rcas_0291 359780 - 360463 + | Crp/FNR family transcriptional regulator Rcas_0292 360543 - 363041 + | glycosyl transferase family protein TERM 295 365389 - 365379 - g 78 -6.8 -4.56702 | overlap 365380 CCCGAAGGAAACAAA TGCG ACC CGCA AAGTGCCGGTTACAA Rcas_0293 363141 - 366632 + | NHL repeat-containing protein Rcas_0294 366983 - 366768 - | copper ion binding protein Rcas_0295 367213 - 368679 + | leucyl aminopeptidase TERM 296 369067 - 369081 + G 78 -3.4 -5.06414 | overlap 369068 369069 TTCGTGCTGGTGCTG ATCGCC GCC GGCGGG TTTTTGTTCGGCACG TERM 297 369353 - 369381 + G 74 -5.1 -4.56597 | overlap 369349 369357 369372 CGCTCGCCGAGGCGA CGTGGGCGCTCAA TTA TTGGGCGGCATCG TTTTTGACCGGCGGC Rcas_0296 368692 - 369540 + | hypothetical protein Rcas_0297 369541 - 370353 + | membrane protein-like protein Rcas_0298 372025 - 371030 - | response regulator receiver modulated metal dependent phosphohydrolase Rcas_0299 372303 - 373475 + | aminotransferase class I and II TERM 298 373674 - 373698 + F 86 -14.3 -3.33261 | CCCGCGCGGCGCAAG CCCCCCGCT CCCCGCC AGCGGGGGG TTATACCAATTCCCG TERM 299 375705 - 375687 - g 77 -2.3 -4.99043 | TTCCGATAAAGAAAA CCTGGCG ATCTA CGGCAAG TGCAACAATCCAAAC Rcas_0300 375202 - 376044 + | putative 6-pyruvoyl tetrahydropterin synthase Rcas_0301 376114 - 376791 + | GTP cyclohydrolase I TERM 300 376803 - 376851 + F 100 -29.1 -3.21099 | opp_overlap 376831 ATGATCCCGTCGTGG GGGCAGGTCTCAGACCTGCCC CCAGTAA GGGCAGGTCTCAGACCTGCCC TTACTACTACGCGAC TERM 301 376851 - 376831 - f 89 -16.9 -3.14211 | opp_overlap 376803 ACCTGCCCCCAGTAA GGGCAGGTC TCA GACCTGCCC TTACTACTACGCGAC TERM 302 376878 - 376898 + F 89 -16.9 -3.21099 | CGACCGGCTCCGGGG GGGCAGGTC TCA GACCTGCCC TTACTACTACGCGAC TERM 303 376926 - 376972 + F 100 -27.4 -3.21099 | GACCGGCTCCGGGGG GGGCAGGTCTCAGACCGGCTCC GGG GGGGCAGGTCTCAGACCTGCCC TTACTACTACGCGAC TERM 304 377001 - 377021 + F 89 -16.9 -3.21099 | ACCGGCTCCGGGGGG GGGCAGGTC TCA GACCTGCCC TTACTACTACGCGAC TERM 305 377180 - 377226 + F 100 -27.4 -3.21099 | AGACCGGCTCCGGGG GGGCAGGTCTCAGACCGGCTCC GGG GGGGCAGGTCTCAGACCTGCCC TTACTACTACGCGAC TERM 306 377255 - 377275 + F 89 -16.9 -3.21099 | ACCGGCTCCGGGGGG GGGCAGGTC TCA GACCTGCCC TTACTACTACGCGAC TERM 307 377302 - 377322 + F 89 -16.9 -3.25823 | overlap 377318 CGACCGGCTCCGGGG GGGCAGGTC TCA GACCTGCCC TTACTATGAGACCGG TERM 308 377420 - 377466 + G 82 -11.5 -4.08706 | gap 2, overlap 377425 377427 GCGGGCGACAGCGCT CGCGCTCGCGGCGCCTGGCGTCG CCA TGAC-CCTGGCGGCGCGATC-CG TTTCTCTCCTGGACG TERM 309 377425 - 377462 + G 72 -14.1 -2.74244 | gap 1, overlap 377420 377427 CGACAGCGCTCGCGC TCGCGGCGCCTGGCGTCG CCA TGAC-CCTGGCGGCGCGA TCCGTTTCTCTCCTG Rcas_0302 377364 - 378062 + | short-chain dehydrogenase/reductase SDR TERM 310 378147 - 378162 + F 77 -11.8 -3.59262 | GTATCGCCCGGTCAA GCCCGC GCAG GCGGGC TTTGCGACTATAGCC TERM 311 378301 - 378247 - f 100 -24.4 -3.53224 | opp_overlap 378268 GAGCTGCGGGCTAAA GCCCTCGCTCAGAATATGGAAGCCCC GGA GGGGCTTTCACGTCCTGAGCCAGGGC TTCAGCCCGCACCAA TERM 312 378268 - 378280 + F 73 -10.5 -3.62096 | opp_overlap 378247 GCTCAGAATATGGAA GCCCC GGA GGGGC TTTCACGTCCTGAGC TERM 313 378800 - 378812 + F 73 -10.5 -3.62096 | opp_overlap 378794 CGTGCAACATCGGAA GCCCC GGA GGGGC TTTCACCTCCTGAGC Rcas_0303 379069 - 379698 + | transcriptional regulator, TrmB Rcas_0304 379755 - 380537 + | FeS assembly ATPase SufC Rcas_0305 380534 - 381751 + | FeS assembly protein SufD TERM 314 381761 - 381799 + F 89 -11.8 -4.2349 | gap 1 ATTTGATGTCCGATG GCGTGGAACGGTGCATC ACACCC GATGCGCCGTTGC-CGC TTTTGCGTGTGCAGG TERM 315 382684 - 382629 - g 86 -16.8 -3.14132 | gap 1 GTGGGGCTGCACGAA TCGACATACGCCGACGTTC-CGGCGCG CTT CGAGGCGGGAACGCCGGCGATTGCCGA GGCGATTGCGCTCGG Rcas_0306 381822 - 383066 + | SufS subfamily cysteine desulfurase Rcas_0307 383072 - 383470 + | NifU family SUF system FeS assembly protein Rcas_0308 383498 - 384913 + | FeS assembly protein SufB TERM 316 384990 - 385024 + T 100 -15.8 -4.2717 | overlap 384991 GCCGCTTGACATCTT TGCCCTCTCTCCGG CGCCGAA CTGGAGAGAGGGCG TTTTGCTAGCATGAT TERM 317 384991 - 385023 + T 89 -17.1 -3.1582 | overlap 384990 CCGCTTGACATCTTT GCCCTCTCTCCGG CGCCGAA CTGGAGAGAGGGC GTTTTGCTAGCATGA Rcas_0309 385994 - 385266 - | hypothetical protein Rcas_0310 386385 - 386795 + | hypothetical protein Rcas_0311 386968 - 387285 + | Rieske (2Fe-2S) domain-containing protein Rcas_0312 387380 - 388225 + | rhodanese domain-containing protein TERM 318 388552 - 388567 + G 91 -9 -4.39329 | overlap 388530 388529 388537 CGCCAGAGATGGTGC TCGCCA TTCC TGGCGA TTTCTTCTATGCGAT Rcas_0313 388230 - 388688 + | Fe-S metabolism associated SufE Rcas_0314 388688 - 389092 + | NifU family SUF system FeS assembly protein Rcas_0315 389082 - 390038 + | cysteine synthase TERM 319 390093 - 390076 - f 100 -8.5 -5.44119 | CCGACCTGAAAAAAA GTGTTTC ACGT GAAACAC GCATGTTGAAAGTTG Rcas_0316 390242 - 390718 + | Mov34/MPN/PAD-1 family protein Rcas_0317 390936 - 391217 + | thiamineS protein TERM 320 391907 - 391882 - g 73 -12.5 -3.16881 | opp_overlap 391873 391888 GACCGAGGCGATTAA GCTGCTCACCG GCAT CGGCGAGCCGC TGATCGGGCGTTTGC TERM 321 392360 - 392332 - g 72 -3.7 -4.66833 | gap 1, overlap 392333 392334 CCGCAAGGTGAAAAA CCTGGCCGGCGG CATCCT CCGCTGGGC-GG ATGAGGTGGACCCCG Rcas_0318 391241 - 392392 + | UBA/THIF-type NAD/FAD binding protein Rcas_0319 392463 - 392672 + | preprotein translocase subunit SecG Rcas_0320 392797 - 394467 + | extracellular solute-binding protein Rcas_0321 394720 - 395586 + | rhodanese domain-containing protein TERM 322 395977 - 396002 + F 100 -8.9 -5.4505 | overlap 395978 CGCGGGGTTTTCCTC ACCTCGTCCCT GCTG AGGGGCGGGGG TTTTTTGTTGGCAAG TERM 323 395978 - 396001 + F 86 -12.4 -3.86307 | overlap 395977 GCGGGGTTTTCCTCA CCTCGTCCCT GCTG AGGGGCGGGG GTTTTTTGTTGGCAA Rcas_0322 396028 - 399267 + | isoleucyl-tRNA synthetase TERM 324 399312 - 399270 - f 74 -11.3 -3.55444 | gap 2, overlap 399271 TGGGTACGTCTGAAA CCGCAGCAGTAGGGTCGGGTC TGC GACCCGACCCT-CGGTCG-GG TCTGCAACCCGACCG TERM 325 399416 - 399440 + F 100 -22.9 -3.28712 | opp_overlap 399416 AGACCTGTCCATAGA GGGGGCGGGTC TGA GACCCGCCCCC TTCTACCCCCCCGAC TERM 326 399440 - 399416 - f 100 -22.9 -2.87683 | opp_overlap 399416 AGACCTGTCCATAGA GGGGGCGGGTC TGA GACCCGCCCCC TTCTACCCCCCCGAC TERM 327 400555 - 400526 - g 73 -7.1 -4.26079 | opp_overlap 400526 TGAAAGCACTGAAAA GGAAGGCAGGCAA CTTT CTGCATCCCTTCC TTTCTGACATCAGTA Rcas_0323 399463 - 400617 + | hypothetical protein Rcas_0324 401307 - 400642 - | hypothetical protein TERM 328 402853 - 402837 - g 95 -10.8 -4.46212 | CTGCTGACGAGAAAA GCGCCG CCAAC CGGCGC GTGGGCTGATGCTTT Rcas_0326 402273 - 403154 + | hypothetical protein Rcas_0327 403157 - 403870 + | Gp37Gp68 family protein Rcas_0328 406415 - 403944 - | DNA gyrase, A subunit TERM 329 404798 - 404842 + g 78 -14.2 -3.06183 | gap 2, opp_overlap 404780 404779, overlap 404806 404833 GCACCACGTCCTGTT CGCGG-GTCGTGGC-GCCGCGG ATG CCGCGTCCGCCGCGCCGCTGCG TTCGGTAGACATCGG TERM 330 404806 - 404838 + g 87 -19.1 -2.54896 | opp_overlap 404780 404779, overlap 404798 404833 TCCTGTTCGCGGGTC GTGGCGCCGCGGATG CCG CGTCCGCCGCGCCGC TGCGTTCGGTAGACA TERM 331 405288 - 405303 + g 72 -11.8 -3.31263 | opp_overlap 405286 ACCTTCGAGGATATG GGCGCG CGCC CGCGCC TTGTCGAGGTCGAAT TERM 332 406457 - 406438 - R 76 -12.1 -3.27923 | overlap 406451 CCTGAACATGATCAA CGGCGGC ATGAAA GCCGCCG GGTGCCGCCCTGCCT Rcas_0329 407269 - 406538 - | metallophosphoesterase Rcas_0330 408014 - 407298 - | phosphoadenosine phosphosulfate reductase TERM 333 407819 - 407807 - G 74 -5.5 -4.52873 | TGTCCAGAAAAACAA CCGGA ATG TCCAG GTTCAAGCGGGCGAC Rcas_0331 409756 - 408326 - | hypothetical protein Rcas_0332 410287 - 409769 - | adenine phosphoribosyltransferase Rcas_0333 411510 - 410674 - | pantoate--beta-alanine ligase Rcas_0334 412353 - 411517 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 334 412404 - 412370 - R 100 -14.2 -5.47159 | overlap 412371 GCGCAACAGAAAAAA GCGGCGAGGAGGGATC GCC GATCCAACCTCGCCGG TCATACCTGGGCAAA TERM 335 412403 - 412371 - R 100 -17.7 -3.87211 | overlap 412370 CGCAACAGAAAAAAG CGGCGAGGAGGGATC GCC GATCCAACCTCGCCG GTCATACCTGGGCAA Rcas_0335 412797 - 412429 - | roadblock/LC7 family protein Rcas_0336 415416 - 413083 - | serine/threonine protein kinase Rcas_0337 417195 - 416185 - | beta-lactamase domain-containing protein TERM 336 416254 - 416292 + g 83 -8 -4.56597 | overlap 416255 416256 ATTGGCGATAGTCAG TTCGCCGCGCATATCGAG ATA CTCGACATACGCGCCGGC TTTTTGCAACGCCAG Rcas_0338 420766 - 417185 - | transcriptional regulator TERM 337 417626 - 417611 - G 70 -10.4 -3.64703 | GCGGTGTGACTGAAA TGCCGG TGCA CCGGCA AGACGCGCCGCCATA TERM 338 421138 - 421162 + G 100 -17.1 -4.11216 | overlap 421139 CCATGTGCGATGTAT CGCCCCGACCG CAA CGGTCGGGGCA TTTTGCGGATAAACG TERM 339 421139 - 421161 + G 93 -20.6 -3.06515 | overlap 421138 CATGTGCGATGTATC GCCCCGACCG CAA CGGTCGGGGC ATTTTGCGGATAAAC TERM 340 421262 - 421276 + G 100 -11.4 -4.72986 | opp_overlap 421244 TGGTCGACGGGTTGC TGCGCC AGG GGCGCA TTTTTCGTGAGAATC Rcas_0339 421132 - 423015 + | GTP-binding protein TypA TERM 341 423366 - 423336 - g 100 -11 -4.72272 | opp_overlap 423336 423335, overlap 423338 GTTCTGGAGCAAAAA CGGCGGGTTGCCGA TCT TTGGCTACCCGCTG GCGCCGACCGATTTG Rcas_0340 423169 - 424647 + | hypothetical protein TERM 342 424775 - 424797 + F 85 -16.4 -3.14053 | opp_overlap 424779, overlap 424773 424767 AGACCATGCTTGGAG GAGACGTTGC ATA GCAACGTCTC TGTTCCGTCCTTTCC Rcas_0341 424999 - 425295 + | hypothetical protein TERM 343 425473 - 425498 + T 71 -5.3 -4.32857 | opp_overlap 425475, overlap 425475 TCGAACCAACCAGCA GACGCACCCGG CACT TCAGGTGCGTA TTTCTATTTCAACCG Rcas_0342 425759 - 425502 - | acyl-CoA-binding protein Rcas_0343 426766 - 425762 - | asparaginase TERM 344 426669 - 426637 - G 73 -12.6 -3.1886 | ACTCAACGGCATCAA GCGCGGAGGCGCCG CTGCT CAGCGCCTCCCAGC CAACCATCAGCGCGC Rcas_0344 427398 - 426799 - | CDP-alcohol phosphatidyltransferase TERM 345 426916 - 426886 - G 84 -11.1 -4.17296 | TCGCAGATAGACAAA TGCTGAGAGGGCG AAAGG CGCCATCGCAGCA TAGAGCGCCGGGCGT Rcas_0345 428119 - 427400 - | hypothetical protein Rcas_0346 428857 - 428132 - | hypothetical protein Rcas_0347 430202 - 429021 - | competence/damage-inducible protein CinA Rcas_0348 430443 - 430192 - | hypothetical protein Rcas_0349 432244 - 430457 - | threonyl-tRNA synthetase TERM 346 432122 - 432144 + g 71 -5.7 -4.27316 | gap 1, opp_overlap 432116 432120, overlap 432122 GTAGTAGAACCCATC TT-CGATTGG CGGA CCAATCGCAA TTTTCCCTTCCGGGA Rcas_0350 432849 - 432262 - | hypothetical protein TERM 347 432889 - 432864 - R 100 -13.3 -5.4505 | TGGTCGAATAAAAAA CCCCTCATCCC GCAT GGGACGAAGGG CTGCTCCGTGGTTCC Rcas_0351 435711 - 433432 - | Na+/solute symporter TERM 348 435211 - 435195 - G 91 -5.1 -5.37043 | ACGGCAGAGAAAAAA CGATATC GGC GATAACG ATCAAAGCGCCGCCG TERM 349 435252 - 435218 - G 81 -12.1 -3.86944 | overlap 435240 GCGATAACGATCAAA GCGCCGCCGGTCATC ACCAG AACCACCGGCAGCGC CGTGTCGGATAAGAC TERM 350 435309 - 435285 - G 72 -12.1 -3.29144 | GCATGCCCTGGACAA CGCGACCGCCG AAG CGACGATCACG CCGCGTCATGATAGC TERM 351 435476 - 435451 - G 76 -8.9 -4.15788 | AAGCGCGGGAAGAAA TGCGCCGCCTG CCCA CAGGAGGAGCA CAATCGTAATCAAGC Rcas_0352 436925 - 435774 - | integral membrane sensor signal transduction histidine kinase TERM 352 436329 - 436313 - G 70 -12.3 -3.21276 | overlap 436311 CCGCGCGCGACAACA GACCGAG TTC CTCGGTC AAACGACGCAGGCGA Rcas_0353 437793 - 437101 - | two component transcriptional regulator TERM 353 438241 - 438218 - R 100 -16.8 -3.50853 | opp_overlap 438205 TGCGGTGAAGGAGAA CGTCCTCCTG GTCG CAGGAGGACG TCTGACGAACCGTTC Rcas_0354 438866 - 438285 - | hypothetical protein Rcas_0355 439138 - 439938 + | cobyrinic acid ac-diamide synthase TERM 354 440164 - 440203 + G 78 -14.3 -3.05343 | gap 2, opp_overlap 440147, overlap 440198 GTCGCTATGAGTTGA TCG-C-CGGCGAGCGCCGC CTGC GCGCCGCTCGCCGCGCCGG TCTTGAACATGTACC Rcas_0356 439935 - 440840 + | parB-like partition protein Rcas_0357 441402 - 442328 + | ribokinase-like domain-containing protein Rcas_0358 442325 - 442951 + | CDP-alcohol phosphatidyltransferase TERM 355 443587 - 443577 - g 71 -5.4 -4.50159 | CTCAATTCAAATAAA TCGT CAT ACGA TAGTAAGATATTAAT Rcas_0359 443007 - 443804 + | hypothetical protein TERM 356 443844 - 443856 + F 71 -7.7 -4.10744 | ATGTCCATCTTATCT GCAAG GGG CTTGC TTGTTGTTTGGATAG TERM 357 444887 - 444904 + G 72 -2.6 -4.68511 | TTGGGAGGGGTATTA GGATCG ATAAGA CGTTCC TTTGTTTCTCTTGGA TERM 358 445256 - 445268 + G 72 -2.7 -4.8048 | TCTAGTTATGGTATG GGAAT ATT ATTTC TTTTTGCTATAACCG TERM 359 445823 - 445838 + G 81 -2.4 -5.13344 | overlap 445825 GTCAGGAGTATTTAT CAGCGG GTTA CTGCGG TTTTTGTGTTGCTAT Rcas_0360 443972 - 445921 + | hypothetical protein TERM 360 447138 - 447179 + G 75 -11.6 -3.60296 | opp_overlap 447146, overlap 447114 CGCCTGGCGCATGCC GTGGAACAGGCGGC-GCGCG ATCT TGCGCTGCCGCATG-TCCGC TTTGCCGTGAGCCTG Rcas_0361 445980 - 447785 + | DNA repair protein RecN Rcas_0362 447823 - 451050 + | TPR repeat-containing protein Rcas_0363 451429 - 452352 + | auxin efflux carrier Rcas_0364 452546 - 453142 + | tripartite ATP-independent periplasmic transporter DctQ TERM 361 453408 - 453395 - g 72 -3.8 -4.57569 | TCAGTGCTGGAAAAA TCCG GTCTGG CGGA GGAATTGCTTGAAAC TERM 362 453852 - 453890 + G 72 -4.4 -4.64676 | overlap 453854 CGTTGAAGGCGCTGG TGCCGCCGATTGCGCTGA TCT TCGCCGTGCTCGGCAGTA TTTTCTTCGGCCTGG TERM 363 454312 - 454324 + G 71 -6.2 -4.30441 | opp_overlap 454299 AACGGCGTTTATTTC GCCG CCGGT CGGC TTTTCGCTCTTCTAC Rcas_0365 453152 - 454486 + | TRAP dicarboxylate transporter, DctM subunit TERM 364 454707 - 454662 - T 88 -14.2 -3.59979 | gap 3, overlap 454663 454666 TTCGCTCAGGGTAAA CGCAGC--GAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC TERM 365 454703 - 454663 - T 84 -17 -2.75844 | overlap 454662 454666 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCGCGGGGTGACCA TERM 366 454701 - 454666 - T 85 -18.4 -2.65354 | gap 1, overlap 454663 454662 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCGCGGGGTGAC TERM 367 455149 - 455104 - T 88 -14.2 -3.59979 | gap 3, overlap 455105 455108 TTCGCTCAGGGTAAA CGCAGC--GAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC TERM 368 455145 - 455105 - T 84 -17 -2.75844 | overlap 455104 455108 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCGCGGGGTGACCA TERM 369 455143 - 455108 - T 85 -18.4 -2.65354 | gap 1, overlap 455105 455104 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCGCGGGGTGAC TERM 370 455386 - 455352 - T 73 -10.1 -3.57144 | gap 2, opp_overlap 455376 CGTTCGACGTGGAAA TGCGGTAGAACGGATGC ACT GCA-CCGT-CTCCCGCA ACAACGCCCGACATT Rcas_0366 455963 - 455658 - | hypothetical protein TERM 371 456036 - 456078 + H 91 -6.3 -5.31275 | opp_overlap 456028 456029, overlap 456035 TAATACATGCTGTCT GT-CGCAGCAGCGCTCCGC GATGACG GCGGCTCGCT-CTGCGCAC TTTTTTGTGATGGAA Rcas_0367 456114 - 458837 + | valyl-tRNA synthetase TERM 372 458859 - 458871 + G 76 -6.9 -4.4017 | CAACGTTCCTGATTA CTGGC GGC GCCGG TTTTCTGGGGATTAA Rcas_0368 458834 - 459877 + | NAD-dependent epimerase/dehydratase Rcas_0369 459943 - 461013 + | cell envelope-related transcriptional attenuator TERM 373 461336 - 461348 + G 71 -5.5 -4.38927 | GTTGGGATCAATCGC CCTGA CCG TCGGG TTTCTTATCTGGCAA TERM 374 461989 - 462042 + G 74 -9.3 -3.85698 | gap 1, overlap 461992 462030 TCGTACTGCTGCTCA TCCTCCCGGCGACCGCCGCTCTC-GC GGC GCTGGGGGCGCCGGTCGTCGCGCTGC TTTATCAGCGCGGCG TERM 375 461992 - 462039 + G 75 -14 -3.00946 | gap 1, overlap 461989 462030 TACTGCTGCTCATCC TCCCGGCGACCGCCGCTCTC-GC GGC GCTGGGGGCGCCGGTCGTCGCGC TGCTTTATCAGCGCG TERM 376 462030 - 462059 + G 76 -12.8 -3.53091 | overlap 461992 461989 GCGCTGGGGGCGCCG GTCGTCGCGCTG CTTTAT CAGCGCGGCGCC TTTGGCGGCGAGGAT Rcas_0370 461025 - 462584 + | integral membrane protein MviN TERM 377 462719 - 462756 + F 81 -14.1 -3.29263 | gap 1 GGCAATGCGCATGTA CCGGCGCGGTCGAGCGCG AAC CTTGCTCGAA-GCGCCGG TTCTGGCGCCGATCT Rcas_0371 462889 - 463896 + | bile acid:sodium symporter TERM 378 464060 - 464082 + F 100 -13.5 -5.1244 | opp_overlap 464054 464062 TGAACGAAACCGCAA GACCATCGC AGCAA GCGATGGTC TTTTTCTGTTGGTGG TERM 379 465103 - 465091 - g 83 -9.1 -4.36914 | TTGGCGTGCAGAAAA TGGCG AAA CGCCA TGCCCTCATCCGTCG Rcas_0372 464118 - 466865 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Rcas_0373 468104 - 467007 - | anti-sigma-factor antagonist Rcas_0374 468876 - 468451 - | response regulator receiver protein TERM 380 469126 - 469152 + G 86 -16.7 -3.18681 | opp_overlap 469109 CGCGATCTGCTCGCG GCATGCCTGGA ATCGC TCCAGGCATGC TTGCTGCCGTTGCAC Rcas_0375 469072 - 470007 + | glycosyl transferase family protein TERM 381 470621 - 470568 - g 82 -14.5 -3.33696 | opp_overlap 470587 TTGTGGCGCAAGCAA CGCTCTTACGCCATCCAGGAAGCGC AGAC GCTCTTCCTGGATGGCGCACCGGTG CGCTGGCGGTCGTTC Rcas_0376 470004 - 470807 + | glycosyl transferase family protein Rcas_0377 470833 - 471777 + | glycosyl transferase family protein Rcas_0378 474586 - 476223 + | TPR repeat-containing serine/threonin protein kinase TERM 382 477210 - 477190 - g 71 -13.9 -2.66435 | opp_overlap 477201, overlap 477187 ACGCTTACCATATTA CGCAGCCGG CTC CCGGCGGCG AAGGTGCGCTGCGCT Rcas_0379 476382 - 477629 + | Beta-ketoacyl synthase TERM 383 477846 - 477884 + G 82 -10.8 -4.07885 | opp_overlap 477870 AGGGTATCTGACTGC CTGGCGCGCGGCGCTGAT ACG AACGGAGACGCTCGCCAG TTTTGCGCGGCGGTA Rcas_0380 477613 - 478317 + | ribonuclease III Rcas_0381 478401 - 479246 + | dTDP-4-dehydrorhamnose reductase Rcas_0382 479376 - 480041 + | HEAT repeat-containing PBS lyase TERM 384 480375 - 480398 + G 83 -14.6 -3.45023 | overlap 480378 GTGACGTATGGCGGC GAAGCGGCGC GCTG GCGCTGCTTC TTATCCTGATCATCC TERM 385 480378 - 480395 + G 76 -10.5 -3.85864 | overlap 480375 ACGTATGGCGGCGAA GCGGCGC GCTG GCGCTGC TTCTTATCCTGATCA TERM 386 480499 - 480459 - g 79 -16.7 -2.53876 | overlap 480443 480480 CGGCAGCGCAACCGA CGGCAGCGCCAGCGCAACC GAC GGCAGCGCCAGCGCAACCG ACGGCAGCGCCAGCG TERM 387 480520 - 480480 - g 79 -16.7 -2.53876 | overlap 480443 480459 480501 CGCCAGCGCAACCGA CGGCAGCGCCAGCGCAACC GAC GGCAGCGCCAGCGCAACCG ACGGCAGCGCCAGCG TERM 388 480541 - 480501 - g 79 -16.7 -2.53876 | overlap 480480 480522 CGCCAGCGCAACCGA CGGCAGCGCCAGCGCAACC GAC GGCAGCGCCAGCGCAACCG ACGGCAGCGCCGACG Rcas_0383 480347 - 482203 + | extracellular solute-binding protein TERM 389 482213 - 482250 + F 100 -17.8 -3.44319 | overlap 482216 AAGTAAGCGACCGGT CGATGCGGGGGACGGG GAAACG CCTGTCCCCTGCATTG TTATACTCAGTTCGG TERM 390 482216 - 482247 + F 95 -15.9 -3.85522 | overlap 482213 TAAGCGACCGGTCGA TGCGGGGGACGGG GAAACG CCTGTCCCCTGCA TTGTTATACTCAGTT Rcas_0384 482279 - 483238 + | binding-protein-dependent transport systems inner membrane component TERM 391 483675 - 483692 + G 70 -9.9 -3.64703 | TGGCAGTCGGTTTTG TGGCGAT GCTG ATCGCCA TTTCGCTCGGAACGA TERM 392 483918 - 483940 + G 76 -6.8 -4.46112 | TGGCGTGGATGCAGA CGGCGCGCGT GGT GCGCGCAACG TTTCTTTCGCTCAAG Rcas_0385 483263 - 484294 + | binding-protein-dependent transport systems inner membrane component Rcas_0386 486691 - 484334 - | serine/threonine protein kinase TERM 393 485045 - 485081 + g 70 -11.6 -3.1978 | gap 1, overlap 485044 485047 CGTCTGCTGCGCTGC TACGGCGACCGTC-TGG CGGG CCATGGCGGTCGCTGTC TGTTGCTCTGACGAT TERM 394 485047 - 485079 + g 80 -14.2 -3.16071 | gap 1, overlap 485045 485044 TCTGCTGCGCTGCTA CGGCGACCGTC-TGG CGGG CCATGGCGGTCGCTG TCTGTTGCTCTGACG TERM 395 486415 - 486401 - G 73 -8.5 -4.06786 | ATCGAAGACGATAAA GCGCC CGAGT GGCGC AGCAAACATATCGAC TERM 396 487451 - 487466 + G 70 -11.8 -3.17075 | overlap 487454 TGGTTTCCGGTGCGC GCGGCG CCAT CGCCGC TTGCCTTCGACCACG TERM 397 487454 - 487502 + G 77 -13.8 -3.31263 | gap 1, overlap 487451 TTTCCGGTGCGCGCG GCGCCATCGCC-GCTTGCCTTCG ACCA CGACCGCATCCTGGCGATGGCGC TTGTGCGCCTGCGCT Rcas_0387 487058 - 487816 + | NUDIX hydrolase Rcas_0388 487926 - 488642 + | nicotinamidase-like amidase TERM 398 489067 - 489047 - g 72 -7.5 -4.2461 | ACGTTCACGAATAAA GCCGCGC GCGAGAT GCGCGAC CGCCTTGAGAAGTTG Rcas_0389 488849 - 491128 + | UvrD/REP helicase Rcas_0390 492711 - 491134 - | transcriptional regulator, CdaR TERM 399 491724 - 491679 - G 76 -11.1 -3.794 | gap 1 CTGGAATGTAGCAAA GCACGTCATCGATGCGGCGC ATGAGCG GCGCCGCAACGCCGA-GCGC ACTGAGTGCGGCGCT Rcas_0391 494146 - 492779 - | glucose/sorbosone dehydrogenase-like protein TERM 400 493790 - 493748 - G 74 -10.5 -3.77722 | gap 1, opp_overlap 493753, overlap 493741 493749 TTCAACGACGAACAA TCGCCCGCTGC-CGTCACCC GCAT GCGTGATGTGCAGCGGACGG TCAAAGCCATCAACA TERM 401 493789 - 493749 - G 74 -14 -2.86151 | gap 1, opp_overlap 493753, overlap 493741 493748 TCAACGACGAACAAT CGCCCGCTGC-CGTCACCC GCAT GCGTGATGTGCAGCGGACG GTCAAAGCCATCAAC TERM 402 494008 - 494026 + g 76 -13.8 -3.21395 | overlap 494006 CAACCGCAGTCGCAA CCGGCGCT GCC GGCGCCGG TGTTGTCGCCGAAGT TERM 403 494224 - 494192 - H 74 -12.7 -3.16564 | opp_overlap 494200 CTTCGAGTCCACGAA GCGTAAGGACGGCTC TCA GACCCGCTCTTACGC TCCGGGTCCGGGATG Rcas_0392 494483 - 495436 + | polyprenyl synthetase Rcas_0393 495459 - 497666 + | alpha amylase catalytic region Rcas_0394 499589 - 498303 - | amine oxidase TERM 404 500449 - 500474 + G 71 -8.9 -3.96148 | gap 1, overlap 500442 500447 CCGCCATCCTGAGCG CCGC-GCGCACC GCA GGCGCGCAGTGG TTTGTCGTCGAGCAG Rcas_0395 499809 - 500567 + | xylose isomerase domain-containing protein Rcas_0396 500682 - 501353 + | hypothetical protein TERM 405 501943 - 501979 + G 74 -5 -4.57569 | gap 1, opp_overlap 501920 CGGCCGCTCCGCCGA GGCGCTGGAAGCGGACG TATA CAACCGCCTCTA-CGCC TTTTTCAGCCGCTAC TERM 406 502462 - 502448 - g 73 -3.5 -4.74706 | CGCAAGACCGAAAAA GGCGA GACCG TCACC TGCCTGGAGCACCAC TERM 407 504444 - 504388 - g 100 -21.3 -3.65827 | opp_overlap 504388 504409 CAAGGTGTATCGAAA TGATGAACGCAGAATGATGAATGATGA ATC TCATCATTCATCATTCATCACTCATCA TTCCTACCTGGTTTA TERM 408 504388 - 504444 + G 89 -16.9 -3.2115 | opp_overlap 504388, overlap 504409 CAAGGTGTATCGAAA TGATGAACGCAGAATGATGAATGATGA ATC TCATCATTCATCATTCATCACTCATCA TTCCTACCTGGTTTA Rcas_0397 501587 - 504673 + | DNA methylase N-4/N-6 domain-containing protein Rcas_0398 504663 - 505061 + | hypothetical protein TERM 409 507792 - 507778 - g 73 -3.5 -4.73613 | gap 1, overlap 507779 GTATCAGCAAGAAAA CGCCGG CCTG CCG-CG CATCCATTTCGACCG TERM 410 507980 - 507994 + G 78 -2.8 -5.00616 | overlap 507970 507982 CGCAACCTGAGCCGC GGCTAT GGC ATAGGC TTTTTTGAGGAACGC Rcas_0399 505058 - 508372 + | type III restriction protein res subunit TERM 411 508412 - 508356 - f 89 -18 -3.05384 | gap 2, opp_overlap 508366 508368, overlap 508359 TGTTCGGGCAGCTAA CCAGCGCTTCCACCTGACGCCGCTCTGC TGC GCTGCGCGGCG-CAGGT-GAAGCGCAGT CCGTCAGGCGTTTTC TERM 412 508409 - 508359 - f 100 -22.7 -2.75064 | gap 2, opp_overlap 508366 508368, overlap 508356 TCGGGCAGCTAACCA GCGCTTCCACCTGACGCCGCTCTGC TGC GCTGCGCGGCG-CAGGT-GAAGCGC AGTCCGTCAGGCGTT TERM 413 508366 - 508422 + F 81 -5.8 -4.77165 | opp_overlap 508359 508356, overlap 508368 GCTAACCAGCGCTTC CACCTGACGCCGCTCTGCTGCG-CTGCG CGG CGCAGGTGAAGCGCAGTC-CGTCAGGCG TTTTCTTCTCAAGCA TERM 414 508475 - 508494 + F 81 -5.7 -4.77165 | gap 1 GAGACGCTGGAGCAG CGCC-GAC AGGCC GTCAGGCG TTTTCTTCTCAAGCA Rcas_0400 508895 - 509221 + | hypothetical protein TERM 415 509356 - 509369 + F 91 -8.1 -4.73108 | opp_overlap 509355 509353 509356 509365 TTTTGAGAAAACGAC CGCCA TATA TGGCG TTTTGATTTTCTAAA TERM 416 509402 - 509387 - f 70 -3.2 -4.58395 | overlap 509365 509388 TTGATTTTCTAAAAA CCACCA AATA TGGTGC TTAAACAAGATTGGC Rcas_0401 509396 - 509869 + | hypothetical protein Rcas_0402 509931 - 510737 + | hypothetical protein Rcas_0403 510746 - 511357 + | hypothetical protein Rcas_0404 511389 - 512036 + | hypothetical protein Rcas_0405 513181 - 512030 - | transposase IS4 family protein Rcas_0406 514076 - 514546 + | hypothetical protein TERM 417 515734 - 515724 - g 74 -2.4 -4.87626 | TTGGAAGACCAAAAA GCGC AAA GAGC CTTGAACAACAATGG Rcas_0407 514608 - 516038 + | site-specific DNA-methyltransferase (cytosine-specific) Rcas_0408 516038 - 517000 + | Type II site-specific deoxyribonuclease TERM 418 517081 - 517023 - f 77 -10.9 -3.61517 | gap 2 ATGGCTGCCCAACAA GCGTTTCCAGCCGACCCGCTCCGCTTCGC TTC GCTCCGCTACGCGGG-CGGCTG-AAACGC GATCCGTTAGGCGCT TERM 419 517930 - 517977 + G 72 -2.6 -4.78764 | gap 1, overlap 517935 517973 TATGAAATGGGCAGG CTTTCTTCTGGGCGTGCC-GCCG AAC TGGCAGGAATGTCCAGAGTTGAG TTTTTGCTCAATTTG Rcas_0409 517804 - 518055 + | hypothetical protein TERM 420 518421 - 518401 - T 77 -11.3 -3.66178 | opp_overlap 518403 TTGGGGAACGTTAAA GATTTTGCT GGA AGCAAAATC TCATGGCATTATTGA Rcas_0411 519761 - 518610 - | transposase IS4 family protein TERM 421 521467 - 521453 - g 73 -3.5 -4.73613 | gap 1, overlap 521454 GTATCAGCAAGAAAA CGCCGG CCTG CCG-CG CATCCATTTCGACCG TERM 422 521650 - 521669 + G 83 -4.8 -5.00616 | TGCTGCGCAACCTGA GCCGCGGC AAAG GCATCGGC TTTTTTGAGGAACGC Rcas_0412 520218 - 522149 + | hypothetical protein Rcas_0413 522943 - 522170 - | alpha/beta hydrolase fold Rcas_0414 524505 - 522970 - | AMP-dependent synthetase and ligase Rcas_0415 526963 - 525416 - | AMP-dependent synthetase and ligase TERM 423 526110 - 526084 - G 78 -15 -3.03159 | GGAAGGTCTCGAAGA CCGGCGGCGGGC ATG GCGCGCCGCCGC TGATCATCCAGCGCA Rcas_0416 529617 - 527581 - | transketolase TERM 424 528424 - 528443 + g 71 -5 -4.39386 | gap 1 GTTTGCCTGAAAACT CGTCGT-TG TCG CATACGGCG TTTTGGTGCTTTCCG Rcas_0417 530300 - 529647 - | putative transaldolase TERM 425 530172 - 530193 + g 72 -4.3 -4.55798 | TGCAATCTCCTGAAT GGTCGCC TTGAAATC GGCGCCC TTTTCCTTTGCCATA Rcas_0418 530441 - 531658 + | RpoD family RNA polymerase sigma factor TERM 426 531785 - 531822 + G 81 -10.5 -4.2461 | gap 1, overlap 531800 GCGTTGTGGTTGAGC GCCTGACACT-CGCAGCG CCG CGCGGCGCGGTGTTTGGC TTTCTTGGTCCAAAT TERM 427 531800 - 531816 + G 79 -11.5 -3.93864 | overlap 531785 GCCTGACACTCGCAG CGCCGCG CGG CGCGGTG TTTGGCTTTCTTGGT Rcas_0419 531724 - 532668 + | ABC transporter related Rcas_0420 532661 - 533449 + | ABC-2 type transporter Rcas_0421 533524 - 534261 + | two component transcriptional regulator Rcas_0422 535755 - 534421 - | response regulator receiver protein TERM 428 537653 - 537631 - g 73 -12.6 -3.14051 | overlap 537629 CCACTGCCACGAACA CGGCGACGCC AAC GGCGACGCCA ACGGCGACGGCCACT TERM 429 537743 - 537709 - g 80 -14.8 -3.14051 | overlap 537707 CCACTGCCACGAACA CGGCGACGGCGACGCC AAC GGCGACGGCGACGCCA ACGGCGACGGCAACG Rcas_0423 535938 - 538412 + | alpha beta-propellor repeat-containing integrin Rcas_0424 539427 - 538405 - | AAA ATPase Rcas_0425 540247 - 539702 - | appr-1-p processing domain-containing protein Rcas_0426 540555 - 540244 - | hypothetical protein Rcas_0427 541504 - 540710 - | GCN5-related N-acetyltransferase TERM 430 541456 - 541442 - G 73 -12.8 -3.24021 | opp_overlap 541438, overlap 541437 541435 CTCGTAAACATGCAA CGCCGG ATT CCGGCG CAGATAGGTTTCAAT TERM 431 541891 - 541861 - R 95 -20.6 -3.02471 | overlap 541863 TCTCGACGACACACA GATCGAGACGTTGC ACC GCAACGTCTCGACC GGAACTCGTACCCTT TERM 432 541889 - 541863 - R 90 -19.6 -3.0682 | overlap 541861 TCGACGACACACAGA TCGAGACGTTGC ACC GCAACGTCTCGA CCGGAACTCGTACCC Rcas_0428 542693 - 541977 - | hypothetical protein Rcas_0429 543397 - 542870 - | hypothetical protein TERM 433 544114 - 544130 + G 83 -5 -4.99638 | GTGGGCTGTAGCGTT CGGGGC AGGCG GCGCCG TTTTTCTCTACGTCT Rcas_0430 543986 - 544633 + | hypothetical protein TERM 434 545218 - 545248 + T 85 -9.7 -4.65895 | gap 1, opp_overlap 545217 545218, overlap 545220 CACACGATTATCAAT G-CCTGATCGCGCG CAAT CGCGCGGTCAGTTC TTTTTGCATCACCAC TERM 435 545220 - 545245 + T 100 -16.9 -4.44608 | opp_overlap 545218 545217, overlap 545218 CACGATTATCAATGC CTGATCGCGCG CAAT CGCGCGGTCAG TTCTTTTTGCATCAC Rcas_0431 545821 - 545213 - | putative sensor protein Rcas_0432 546294 - 546848 + | deoxycytidine triphosphate deaminase Rcas_0433 547388 - 546966 - | NUDIX hydrolase Rcas_0434 548335 - 547418 - | cytochrome c biogenesis protein transmembrane region TERM 436 548196 - 548156 - G 100 -17.6 -4.17556 | gap 1, opp_overlap 548174 548176, overlap 548143 548176 CACACCGGCAAGAAA CGCCGC-CGGCGCCAGAAT GAGC ATGCTGGCGCCGCGTGGCG CCACCGGACTGCTGC Rcas_0435 549391 - 548348 - | FAD dependent oxidoreductase Rcas_0436 549655 - 550269 + | hypothetical protein TERM 437 550366 - 550378 + G 86 -6.9 -5.0925 | overlap 550360 GTTCGCTCTGGCAGT CCGGT GAC GCCGG TTTTTGCTTTTACCG TERM 438 550465 - 550482 + G 77 -2.6 -5.0538 | opp_overlap 550458 GTCAATGATCCGGGG GCGAAG ATCCAC CTGCGC TTTTTTGACCTGAAC Rcas_0437 550282 - 551229 + | hypothetical protein Rcas_0438 552701 - 551934 - | peptidase C26 TERM 439 552785 - 552827 + H 90 -14.9 -3.59979 | overlap 552786 552788 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 440 552786 - 552826 + H 86 -18.4 -2.75844 | overlap 552785 552788 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 441 552788 - 552823 + H 88 -19.8 -2.65354 | gap 1, overlap 552786 552785 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_0439 553088 - 554110 + | fumarylacetoacetate (FAA) hydrolase TERM 442 555336 - 555366 + GT 74 -6.8 -4.30034 | gap 1, overlap 555334 GGTGACAATGCTGCG GCGCCGGC-GTGC TTCTAT GCACTGTCGCCGC TTTTGCTCCCCTTTT Rcas_0441 556598 - 556164 - | hypothetical protein Rcas_0440 554103 - 556220 + | hypothetical protein TERM 443 557184 - 557226 + FH 90 -14.9 -3.59979 | overlap 557185 557187 ATGGTCACCCCGATC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 444 557185 - 557225 + FH 86 -18.4 -2.75844 | overlap 557184 557187 TGGTCACCCCGATCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 445 557187 - 557222 + FH 88 -19.8 -2.65354 | gap 1, overlap 557185 557184 GTCACCCCGATCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_0442 557333 - 559621 + | hypothetical protein Rcas_0443 560470 - 559625 - | tellurium resistance protein TerC TERM 446 561227 - 561188 - g 76 -8.7 -4.13767 | gap 1 GTGGCGAGGCGAAAA TCGGCACA-ACCGGAC GCGGGATTG GTCCGGCGTATGCCGA CAAAATGATGCGCAT TERM 447 561290 - 561278 - g 79 -9.1 -4.24342 | TGTTGCACGAAGAAA CGCTG CTC CAGCG TCTACGCCTGGCGCT Rcas_0444 560815 - 562107 + | adenylosuccinate synthase Rcas_0445 562402 - 562112 - | hypothetical protein Rcas_0446 563551 - 562601 - | cobyrinic acid ac-diamide synthase TERM 448 563706 - 563726 + H 76 -9 -4.08144 | AAGCGACTGATGACG CTGTGGCT CGCGC AGCCGCAG TTTGTCATTCATGGC TERM 449 564220 - 564202 - g 74 -9.6 -3.85114 | overlap 564208 AAACGGCATACGAAA TCGAAACG AAA CGTCTCGA AGCCCCTATTGGCAA TERM 450 564615 - 564662 + G 100 -13.2 -4.79223 | opp_overlap 564640 564641 564643 TATGCGGCTGCGCTG GCGGCGGGCGCCGGCGGCGG CAAAATCA CCGGCGCCGGCGGTGGCGGC TTTTTGATGATCTAC Rcas_0447 563778 - 564821 + | GHMP kinase Rcas_0448 564908 - 565531 + | histidinol-phosphate phosphatase family protein Rcas_0449 565550 - 567685 + | lipopolysaccharide biosynthesis protein Rcas_0450 567682 - 568404 + | hexapaptide repeat-containing transferase Rcas_0451 569442 - 570686 + | glycosyl transferase family protein TERM 451 570722 - 570756 + F 95 -20.8 -2.65264 | overlap 570754 TGGCGGCAGATCTCG CGGGATCGGCGAAGGT ATT GCCTTCGCCGATCCGG TCCTGTCCATCATGC Rcas_0452 570937 - 572958 + | hypothetical protein TERM 452 573840 - 573864 + G 76 -8.5 -4.21908 | overlap 573842 GGCGAGCATTCTGGC GTTGCAGGTGA CGT TCACCCGCATC TTTTCGATCATGATC TERM 453 573842 - 573862 + G 71 -9.7 -3.70674 | overlap 573840 CGAGCATTCTGGCGT TGCAGGTGA CGT TCACCCGCA TCTTTTCGATCATGA Rcas_0453 573769 - 576255 + | hypothetical protein Rcas_0454 576688 - 578418 + | radical SAM domain-containing protein TERM 454 578448 - 578480 + F 100 -17.8 -5.37593 | GCAGATGTCGATGAG CGTGGCGTGGAGTA GAGCA TTCTCCACGCCACG TTTTTTGATTTCGCG TERM 455 579152 - 579193 + G 78 -4.9 -4.76644 | gap 1, overlap 579153 GCCATCGATGCGCTG CGCGGCGTGGCGCTGACGCT CAT GGCG-CTGACCCATGCCGCC TTTTTCATCGGTGTT Rcas_0455 579059 - 580228 + | membrane protein-like protein TERM 456 580257 - 580274 + F 84 -5.6 -4.96848 | overlap 580252 GGCGCAGATTCGCGC GAAAGG AGCGTA CCTTTC TTTTTGTATGCGCAG Rcas_0456 580486 - 581670 + | glycosyl transferase group 1 TERM 457 582766 - 582778 + G 81 -6.9 -4.79352 | overlap 582767 TGGTGGCATTGCCCA TCGCC GTC GGCGG TTTTATTGTCGCTGC Rcas_0457 581844 - 583310 + | polysaccharide biosynthesis protein Rcas_0458 583327 - 584670 + | glycosyl transferase group 1 TERM 458 584744 - 584779 + F 86 -13.2 -3.47345 | gap 1, opp_overlap 584737 GCAGGACATGCGAGC GAGC-CGCTCGCGCTCC CAG GGAACGCGGGCGAGCGC TTGTGCTCTCAAGTT TERM 459 584847 - 584889 + F 93 -16.3 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGCTGCG TTTACCCTGAGCGAA TERM 460 585290 - 585266 - g 76 -13.5 -3.17382 | AACAACGATACTGAA GTCGCGCCAGA CTT CCTGGCGCGCC TGATCGATGCCGCCG TERM 461 585612 - 585623 + G 72 -7.2 -4.19704 | GCATTCTGCACGTGC CGCG ATCG CGCG TTTTACATAAGATTC Rcas_0459 584972 - 585883 + | glycosyl transferase family protein TERM 462 586024 - 586077 + F 78 -10.7 -3.86897 | GGGGCGCTCCCCTGT GGGCGCCCCCGTGGGGGCGCGGC AGTGCGTA GGGGCACTCCCCTGTGGGCGCCC TTTGTAGAGCGTAAA TERM 463 587135 - 587125 - g 76 -6.8 -4.4891 | overlap 587132 587133 TCGAGCAGGACAAAA CCGA CAA TCGG GCGCAGGAGCGTCTC Rcas_0460 586443 - 587984 + | hypothetical protein Rcas_0461 588475 - 589647 + | glycosyl transferase group 1 Rcas_0462 589658 - 590884 + | glycosyl transferase group 1 Rcas_0463 590886 - 591767 + | glycosyl transferase family protein Rcas_0464 591780 - 592964 + | glycosyl transferase group 1 Rcas_0465 592971 - 594431 + | O-antigen polymerase TERM 464 595270 - 595283 + G 74 -5.9 -4.43877 | opp_overlap 595269, overlap 595281 TGATCGCGGCAACAC CTGGC GACC GCCGG TTTATTTCACCGTTC Rcas_0466 594428 - 596032 + | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase TERM 465 598399 - 598414 + G 71 -6 -4.36554 | opp_overlap 598388 598397 598395 598392, overlap 598401 AACACGAACGACACG CTCGCG CGAG CGCGTG TTTCTTGTCCTGGTA TERM 466 598596 - 598618 + G 80 -6.1 -4.7173 | CGCCGAACCGGTTGA CGCCTGAGC CGAAT GCCCCGGCG TTTTTCAATCTGCTC Rcas_0467 598346 - 600010 + | hypothetical protein TERM 467 600531 - 600547 + G 71 -9.3 -3.68529 | TCGCGCTGATCTATG GGCTGGC GAC GCCTGCC TTTCCCTACTCAAAT Rcas_0468 600017 - 601567 + | hypothetical protein TERM 468 602694 - 602675 - g 71 -9.2 -3.75863 | opp_overlap 602673 AAAATCTTCAGCAAA CCCGGCAG GCTG CTGGCGGG GCGATTTTCGTTTTC Rcas_0469 601840 - 603414 + | glycosyltransferase TERM 469 603624 - 603570 - f 74 -12 -3.54741 | opp_overlap 603562 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 470 603758 - 603704 - f 74 -12 -3.54741 | opp_overlap 603696 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 471 603892 - 603838 - f 74 -12 -3.54741 | opp_overlap 603830 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 472 604026 - 603972 - f 74 -12 -3.54741 | opp_overlap 603964 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 473 604160 - 604106 - f 74 -12 -3.54741 | opp_overlap 604098 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 474 604365 - 604311 - f 74 -12 -3.54741 | opp_overlap 604303 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 475 604499 - 604445 - f 74 -12 -3.54741 | opp_overlap 604437 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 476 604633 - 604579 - f 74 -12 -3.54741 | opp_overlap 604571 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 477 604838 - 604784 - f 74 -12 -3.54741 | opp_overlap 604776 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 478 604972 - 604918 - f 74 -12 -3.54741 | opp_overlap 604910 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 479 605106 - 605052 - f 74 -12 -3.54741 | opp_overlap 605044 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 480 605240 - 605186 - f 74 -12 -3.54741 | opp_overlap 605178 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 481 605445 - 605391 - f 74 -12 -3.54741 | opp_overlap 605383 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 482 605780 - 605726 - f 74 -12 -3.54741 | opp_overlap 605718 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 483 605914 - 605860 - f 74 -12 -3.54741 | opp_overlap 605852 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 484 606119 - 606065 - f 74 -12 -3.54741 | opp_overlap 606057 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GTA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 485 606324 - 606270 - f 74 -12 -3.54741 | opp_overlap 606262 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 486 606458 - 606404 - f 74 -12 -3.54741 | opp_overlap 606396 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 487 606592 - 606538 - f 74 -12 -3.54741 | opp_overlap 606530 GAGTAGCGGGCTAAA GCCCTTGCTCAGGACATTGAAGCCCC GCA GGGGCTTGCACGATCTCAGCCAGGGC TTCAGCCCGCAGCTT TERM 488 607468 - 607484 + G 81 -7.9 -4.4261 | overlap 607470 GTCCTGAAGCAGCGG CGGCGCA CAA TGCGCGG TTTTCCTCTTCGGCA Rcas_0470 606795 - 607679 + | hypothetical protein TERM 489 609385 - 609399 + G 73 -8.5 -4.0251 | GTTCTCTCCAATTCG GGCGG ATTTA CCGCC TTTGATTCTAATGAT Rcas_0471 608494 - 611673 + | hypothetical protein Rcas_0472 612223 - 611753 - | transcription activator effector binding TERM 490 611887 - 611861 - G 78 -2.8 -5.02476 | ATACTCCGTAAAAAA GCGACCGATGGC TTC GCCAATAACCGC TGAGTTCTTTTCCAG TERM 491 613652 - 613668 + H 73 -10.1 -3.6715 | ATCCAGCATAGACTT TGCTGCG AGT CGCGGCA TTTGCACTTCCATGA TERM 492 613761 - 613776 + G 90 -8.2 -4.84359 | TATTCTGCTCGTCGC CCCGGT ATGC GCCGGG TTTTTCTGGCAATCA Rcas_0474 613696 - 614790 + | restriction endonuclease TERM 493 614816 - 614833 + F 78 -9.9 -3.87373 | AGAACAATCGCCTCC TGCGTCA TTTG TGACGCA TTTGTGAAAGGTGTG TERM 494 615543 - 615529 - g 72 -4.2 -4.57837 | ATATCGGCGCAAAAA CCGCAT ATG ATGTGG CAGTCGAGATTTCCA Rcas_0475 614898 - 615725 + | hypothetical protein Rcas_0476 617133 - 615895 - | hypothetical protein Rcas_0477 617325 - 618542 + | ROK family protein Rcas_0478 618610 - 619989 + | extracellular solute-binding protein TERM 495 620380 - 620393 + G 81 -2.3 -5.21236 | overlap 620364 CGGGTGGCAGATTTA CCCGA TTAT TCGCG TTTTTGTTCTGAGTT TERM 496 620473 - 620515 + G 83 -9 -4.3453 | opp_overlap 620473 GCACAACTATATCAA TGCGCTCAACGATCCGTTGT TTC ACGTCGGTATGTTGCGCGCA TTTGTGTTTACAGTT Rcas_0479 620252 - 621196 + | binding-protein-dependent transport systems inner membrane component Rcas_0480 621211 - 622071 + | binding-protein-dependent transport systems inner membrane component Rcas_0481 622085 - 622822 + | hypothetical protein Rcas_0482 622828 - 623520 + | hypothetical protein TERM 497 624163 - 624193 + G 89 -14.7 -3.85698 | gap 1, overlap 624165 624185 GTGGGGACGCCTGGG CAC-GCCGCGCGAC ATCG GGCGCGCGGCGGTG TTTCTCGCCAGCGAC TERM 498 624165 - 624190 + G 84 -17.5 -2.70946 | overlap 624163 624185 GGGGACGCCTGGGCA CGCCGCGCGAC ATCG GGCGCGCGGCG GTGTTTCTCGCCAGC Rcas_0483 623501 - 624283 + | short-chain dehydrogenase/reductase SDR Rcas_0484 626235 - 624289 - | polysaccharide biosynthesis protein CapD Rcas_0485 626927 - 626250 - | hypothetical protein Rcas_0486 628135 - 626924 - | DegT/DnrJ/EryC1/StrS aminotransferase Rcas_0487 629310 - 628222 - | hypothetical protein TERM 499 629158 - 629140 - G 100 -6.6 -5.4505 | opp_overlap 629140 GGGGCGAAGAAAAAA GGGGTGAA CAA TCCGCCCC TCATGTGATGCCACA Rcas_0488 630350 - 629322 - | NAD synthetase TERM 500 629494 - 629440 - G 76 -7.7 -4.25104 | gap 1, overlap 629441 CGTTTGCGAGCAAAA TCGTTGAAGGCGCGCTGCACCTG-CG CTGG CGTCAGGCGCAGCGCCTCTGCCACAT CCACTACCGGTACGT Rcas_0489 632340 - 630340 - | asparagine synthase (glutamine-hydrolyzing) Rcas_0490 633963 - 632425 - | AMP-dependent synthetase and ligase Rcas_0491 634273 - 633950 - | hypothetical protein Rcas_0492 634965 - 634300 - | LmbE family protein Rcas_0493 635848 - 634985 - | hypothetical protein TERM 501 635211 - 635241 + g 74 -6.1 -4.42386 | opp_overlap 635211 CATGCCGTCAGGACA TCGAGCACGGTAA GCGTG TCATCGCGCTCGA TTTTGTAGATGACCG TERM 502 635571 - 635559 - G 85 -10.5 -4.2717 | overlap 635567 ACCAGGCGATGAAAA GCGGG AAA CCCGC GATAATCGGGATGCA Rcas_0494 636511 - 635852 - | undecaprenyl-phosphate galactose phosphotransferase Rcas_0495 637692 - 636529 - | glycosyl transferase group 1 Rcas_0496 638956 - 637727 - | glycosyl transferase group 1 TERM 503 638785 - 638767 - G 71 -13.1 -3.00525 | overlap 638762 TGGCGGCAAAGGAGA CGCGCCG CCCAT CGGCGCG CTGCCAGTCGGGGGC Rcas_0497 640489 - 638972 - | hypothetical protein TERM 504 640245 - 640229 - G 91 -2.9 -5.40014 | AAAGAAGAAGAAAAA CCAGC CAAATGC GCCGG ACAGACCAATTGGAT Rcas_0498 641835 - 640486 - | polysaccharide biosynthesis protein TERM 505 640751 - 640723 - G 76 -6.6 -4.40003 | gap 1 CGCCAGAAAGAGAAA CGCCTGTGC-GCG CAAG CGCCGCACCGCCG TCATCGCATCGCCGA Rcas_0499 644516 - 641862 - | hypothetical protein TERM 506 642593 - 642542 - G 84 -8.6 -4.53303 | gap 1, overlap 642544 CATCCTGATATAAAA TC-CCGCTGATTGGTGCGCCGCTCG TCG CAATCGGCGCATCAGCCGGCAGCGA GGCGCGCAGCGCCCG TERM 507 644345 - 644365 + g 73 -12.5 -3.14978 | overlap 644343 644341 644356 CCAATGCTGTGGGAA CGGCGGTCG GAT CGGCCGCTG TGTGTTCGATTGTCG Rcas_0500 646052 - 644544 - | secretion protein HlyD family protein TERM 508 646022 - 646007 - G 100 -10.4 -4.82901 | CTCCCGCCAGAAAAA GGAGCG CCAG CGCTCC GACCACGAATCTGGA Rcas_0501 647595 - 646129 - | lipopolysaccharide biosynthesis protein TERM 509 648316 - 648293 - H 76 -8.8 -4.128 | gap 1, opp_overlap 648292 648301 ACCGGTACACACAAA GCGAGACGCTG CCG CAGCG-CGCGC CGTTCTCCCTGGCGG Rcas_0502 648416 - 650203 + | hypothetical protein Rcas_0503 650200 - 651270 + | hypothetical protein Rcas_0504 653284 - 652886 - | glyoxalase/bleomycin resistance protein/dioxygenase Rcas_0505 653563 - 654660 + | cytochrome-c peroxidase TERM 510 657478 - 657427 - g 73 -10.9 -3.57462 | gap 3, opp_overlap 657414 657436 657437, overlap 657414 GACCGGACGGGTAAA CCGGTATGGTCCGGCGATGGCG-CGG GCG CCGTCGGCATCGCCG--CCTTATCGG GTGATGATACCGGTA Rcas_0506 654680 - 657505 + | hypothetical protein TERM 511 657565 - 657539 - f 77 -14.4 -2.79501 | opp_overlap 657538 657542, overlap 657528 657542 GAGAGGTTCAGGACA TCAGGGCAGGTC TCA GACCCGCCCTGC GTTGCCTGAGTCGGG TERM 512 657562 - 657542 - f 76 -14.7 -2.66435 | opp_overlap 657542 657538, overlap 657539 657528 AGGTTCAGGACATCA GGGCAGGTC TCA GACCCGCCC TGCGTTGCCTGAGTC TERM 513 658316 - 658278 - f 90 -15.3 -3.48924 | opp_overlap 658286, overlap 658281 658282 658284 TCATCCGGTATAGAA TAACCAGACCGGCGCAC GACGA GCGCGCCGGTCCGCTCA TCGTGGGCGCGGTGT TERM 514 658313 - 658281 - f 93 -14.8 -3.88232 | opp_overlap 658286, overlap 658278 658282 658284 TCCGGTATAGAATAA CCAGACCGGCGCAC GACGA GCGCGCCGGTCCGC TCATCGTGGGCGCGG TERM 515 658312 - 658282 - f 86 -18.3 -2.92618 | opp_overlap 658286, overlap 658281 658278 658284 CCGGTATAGAATAAC CAGACCGGCGCAC GACGA GCGCGCCGGTCCG CTCATCGTGGGCGCG TERM 516 658310 - 658284 - f 87 -17.3 -3.01243 | opp_overlap 658286, overlap 658282 658281 658278 GGTATAGAATAACCA GACCGGCGCAC GACGA GCGCGCCGGTC CGCTCATCGTGGGCG Rcas_0507 658348 - 658965 + | hypothetical protein Rcas_0508 661903 - 659120 - | peptidoglycan glycosyltransferase TERM 517 662040 - 662073 + G 83 -15.3 -3.22774 | opp_overlap 662040 662039 AGGTTCGATAGCAAT CGGCGCGGCGATGGT CGCT GCCATCGTTGCGCTG TTCATGCTCCCTGTG TERM 518 662195 - 662221 + G 93 -20.2 -2.90212 | AGGGGCAGTCGCTCG TGCTGGCGCCGA TGG TCGGCGCCGGCA TGTATGGAGTGCTGG TERM 519 662681 - 662710 + G 75 -12.2 -3.61398 | gap 2, overlap 662687 662693 662698 TTCTCGCGGCATTCG GCGCACTGGCGGCG CATC CGCCGCC-GTG-GC TTGTTCGGCGAACCC Rcas_0509 661981 - 663885 + | hypothetical protein Rcas_0510 663896 - 665881 + | serine/threonine protein kinase Rcas_0511 666031 - 666345 + | methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding Rcas_0512 666495 - 667505 + | LacI family transcription regulator Rcas_0513 667640 - 668908 + | Pyrrolo-quinoline quinone Rcas_0514 668973 - 669980 + | binding-protein-dependent transport systems inner membrane component Rcas_0515 670020 - 670928 + | binding-protein-dependent transport systems inner membrane component TERM 520 671337 - 671303 - g 75 -12.1 -3.61398 | gap 1 TGTGGCGGGCAACAA GGCGCCTCCCCC-ACG GCAG CGCCGGGCGAAGCGCC AACCACTGCGCCGGC Rcas_0516 671225 - 672691 + | extracellular solute-binding protein TERM 521 672693 - 672735 + F 72 -14.2 -2.68823 | gap 1, opp_overlap 672692, overlap 672703 AGGCGGGCAGGTAAT CCGTGGGCGTGCAGGGAGT GCAGGG AGTCCCTGCACGCGC-CGG CTTGTATCGGACAGG TERM 522 672703 - 672736 + F 79 -13.1 -3.48276 | gap 1, opp_overlap 672692, overlap 672693 GTAATCCGTGGGCGT GCAGG-GAGTGCAGGG AGT CCCTGCACGCGCCGGC TTGTATCGGACAGGG TERM 523 672750 - 672787 + F 93 -16.3 -3.63515 | GCTTGTATCGGACAG GGCGCTTGGTGCGACGT CTGT GCGTTGCGCGAAGCGCC TTCTTCACGATGCCG TERM 524 674074 - 674092 + G 81 -6.6 -4.8048 | overlap 674075 ATCATGATGATGCCA ACGCTCCT GAT GGGAGCGG TTTTTCCTGTGGCGG TERM 525 674381 - 674397 + G 70 -10.1 -3.62597 | opp_overlap 674350, overlap 674368 674396 GGGTGACGGGCGCGA CGCTGCT TGC AGCGGCG TTGTTGCCGCCTGGC Rcas_0517 672823 - 675333 + | spermine synthase TERM 526 675852 - 675864 + G 71 -6.2 -4.33182 | overlap 675845 CGGTCCGCGTGAACT CGGC TGTTC GCCG TTCTTTTGTGAATGG Rcas_0518 675367 - 676407 + | oxidoreductase domain-containing protein TERM 527 676568 - 676558 - g 73 -8.2 -4.07568 | overlap 676559 GCGCCGCCTGCAAAA CGCG CTG CGCG CCTATGCCGGCGTCG Rcas_0519 676418 - 678277 + | glycoside hydrolase family protein TERM 528 678917 - 678895 - g 71 -5.5 -4.30719 | gap 1 TGGCGCCATAAGAAA CTGCTCGGCG GCGG CGGCG-GCAG CATCGACATTGGGGT TERM 529 678978 - 678999 + G 73 -11.5 -3.55622 | opp_overlap 678972 678971 CGGTGAAATCGCTGC GGTGAGCGC CGTT GCGCGCACC TTTGCGCCGGTTCGA Rcas_0520 678274 - 679524 + | oxidoreductase domain-containing protein TERM 530 680673 - 680633 - g 71 -5.9 -4.34267 | overlap 680626 680634 GTACATAACTGAAAA CGGCGCCGCCTATCCAGAC GAA GTCTCATCCGACGGCGGCG TCCACGACCCGGATC Rcas_0521 679575 - 680936 + | Beta-glucosidase TERM 531 681375 - 681390 + T 72 -11.8 -3.29144 | GTGATGCGCCCCTGC CCCCCG CGTG CGGGGG TTCTGCGAACACTCG Rcas_0522 683438 - 681744 - | formate--tetrahydrofolate ligase TERM 532 682213 - 682195 - G 72 -3.8 -4.66537 | overlap 682197 TCGGCGAAGACAAAA CTTTCGAC CAC ATCGAACG CTCCTGATTCGCGCG TERM 533 683493 - 683462 - R 70 -13.1 -2.86164 | CTTCGAAGCATGATA CTGCGGATGCG TCATTGCAAC CGCATCCGCAG TATAGCAAACAAACA Rcas_0523 684287 - 683553 - | hypothetical protein TERM 534 684592 - 684630 + r 100 -23.4 -3.14564 | opp_overlap 684599, overlap 684599 TTCTCCTCTCTTCTC TCACTAAGGGTGTCTGAC ACA GTCAGGCGCCCTTAGTGA TTCCTGGCGCAGTGC TERM 535 684599 - 684623 + r 86 -14.3 -3.29096 | opp_overlap 684599, overlap 684592 CTCTTCTCTCACTAA GGGTGTCTGAC ACA GTCAGGCGCCC TTAGTGATTCCTGGC Rcas_0524 685563 - 684595 - | putative esterase Rcas_0525 688235 - 685593 - | TPR repeat-containing serine/threonin protein kinase TERM 536 686545 - 686522 - G 70 -7.4 -4.03811 | gap 1 GATACCAGTAAACAA CACCGCGCGCA TTG TGCGC-CAGCG CCTGAAGCAGGTTCT TERM 537 688738 - 688755 + G 70 -9.8 -3.55487 | overlap 688718 688717 688751 CGGTGGTCATCGCCG GCGCCG TTCTTC CGGCGC TTCTCCTTGGTGTGA Rcas_0526 688479 - 689633 + | major facilitator transporter Rcas_0527 691735 - 689669 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 538 690279 - 690231 - G 70 -7.2 -4.07568 | gap 1, overlap 690233 690235 690256 690266 690267 CCGGTTTCGGGAAAA TAGACCGCGCCGCG-CTGCGGTG AAAC CGGCGCAAACGCGGCGCCGGCAA CGGCAGCGCTATCCA TERM 539 690277 - 690233 - G 70 -9.8 -3.63744 | gap 1, overlap 690231 690235 690256 690266 690267 GGTTTCGGGAAAATA GACCGCGCCGCG-CTGCGGTG AAAC CGGCGCAAACGCGGCGCCGGC AACGGCAGCGCTATC TERM 540 690275 - 690235 - G 71 -11 -3.39908 | gap 1, overlap 690233 690231 690256 690266 690267 TTTCGGGAAAATAGA CCGCGCCGCG-CTGCGGTG AAAC CGGCGCAAACGCGGCGCCG GCAACGGCAGCGCTA TERM 541 690276 - 690256 - G 71 -11.1 -3.53012 | overlap 690235 690233 690231 690266 690267 CGCGCTGCGGTGAAA CCGGCGC AAACGCG GCGCCGG CAACGGCAGCGCTAT TERM 542 691266 - 691248 - G 75 -3.7 -4.73108 | overlap 691249 TTCACAAAATCAAAA CCGGGCA GCACG CGCCCGC GTAGATCGGGATGCG Rcas_0528 691874 - 692809 + | LmbE family protein Rcas_0529 692995 - 693528 + | hypothetical protein TERM 543 695034 - 695006 - g 72 -4.3 -4.56597 | opp_overlap 694991, overlap 695008 GCGCCGGGCGAAAAA CTGGCGCTTGTCG GTC CGAACGGCGCCGG CAAGACGACGCTGAT TERM 544 695241 - 695277 + G 70 -12.1 -3.22653 | overlap 695240 695244 TTGACGACGCGCAGC GGATCGGCGCAGCGGCG CAG CGCGGCGGCGCCGATGA TGTTGTGGCGGTGCT TERM 545 695244 - 695274 + G 86 -18.2 -2.80252 | overlap 695241 695240 ACGACGCGCAGCGGA TCGGCGCAGCGGCG CAG CGCGGCGGCGCCGA TGATGTTGTGGCGGT Rcas_0530 693782 - 695659 + | ABC transporter related Rcas_0531 698479 - 695660 - | uncharacterized membrane protein-like protein TERM 546 697032 - 696994 - G 100 -24.6 -3.47078 | overlap 696979 696977 CACCGGACAGCAGAA GTTCGGCGCGGTTGCGCC ACA GGCGCAGCGGCGCCGAAC TCGCCAGCAGCGCCA Rcas_0532 707458 - 699419 - | tetratricopeptide TPR_4 TERM 547 700743 - 700709 - G 76 -13.6 -3.14344 | GAGCGCGCGGAGGAA CGCCGGCAACAGCAAC GTC GTCGCCATTGCCAGCA AAACCCATGCCTGCA TERM 548 702520 - 702489 - G 70 -12.2 -3.12351 | CGCGCCCAGAGCCAA CCGCCGTCCGGCGC GCGC GCGCCGAACACCAG CATCGCCACCGGCAG TERM 549 703418 - 703405 - G 72 -3.8 -4.64598 | TAACCACGGCAAAAA GCAG CCAGAC CTGC ATGCCGAACTTGAAC TERM 550 703902 - 703889 - G 72 -3.7 -4.62872 | ATGAATCTGCAAAAA CTCCG ACGT CGGTG TGCGCGACCCATTCC TERM 551 706094 - 706058 - G 71 -10.8 -3.44622 | gap 1 GACTGCGACAATCAA TGGCGCGCGCCAGGCGA TCCG TCGCC-AGCGCGGTCCA ACAGCGCACTGCGCT Rcas_0533 710219 - 708954 - | hypothetical protein Rcas_0534 713056 - 711743 - | TPR repeat-containing protein TERM 552 712156 - 712198 + g 74 -13.3 -3.33969 | gap 1 TCGTTCCAATTGCCG CCGGCGCCGGCTGCGCCTGC TCGG GC-GGTGTGACAGGCGCCGG TTCTGGGGTGGGTTG TERM 553 713811 - 713776 - H 72 -14.1 -2.65354 | gap 1, overlap 713773 713772 CTCAGGGTAAACGCA GCGAGGAATCTGAGCG GGTCG CGCCC-GACTCCTCGC GCTGCTCGGGGTGAC TERM 554 714421 - 714401 - g 71 -11.1 -3.53012 | CGGTGTTGCGGGAAA CGCTGACGG AAA CGGTCAGCG GCAGCGGTTCGGTGC Rcas_0535 714142 - 714810 + | hypothetical protein TERM 555 714834 - 714878 + F 100 -21.4 -2.87132 | overlap 714854 AGTGTGGCGACGCTG CGGGCGCAGGTGCGCGGCGG GGGGA CGGTCGCGCACCTGCGTCAG TGTCTGCCGCGACAC Rcas_0536 715209 - 715478 + | hypothetical protein Rcas_0537 715979 - 715632 - | hypothetical protein Rcas_0538 716225 - 715980 - | hypothetical protein Rcas_0539 717246 - 717034 - | hypothetical protein Rcas_0540 719992 - 718772 - | coenzyme F390 synthetase-like protein TERM 556 719784 - 719764 - G 70 -10.4 -3.55444 | overlap 719744 GCCGCAGGGCGGAAA GCGGCACG GTGAG CATGCCGC CCAACCCCGGACCCT Rcas_0541 720808 - 720008 - | ABC transporter related Rcas_0542 722296 - 721034 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 557 722151 - 722167 + g 76 -13.7 -3.15544 | CCGGTTGTCGCTCCG CCGCCTG CCG CAGGCGG TTGCTGCGGCTGACC Rcas_0543 723336 - 722278 - | inner-membrane translocator Rcas_0544 724235 - 723354 - | inner-membrane translocator TERM 558 723857 - 723843 - G 70 -10 -3.61398 | GCTGGCGCCGAACAA CGCGAT CGT ATCGCG GGGAAGGAACTGTGG Rcas_0545 726276 - 724327 - | AMP-dependent synthetase and ligase Rcas_0546 727091 - 726279 - | ABC transporter related Rcas_0547 728598 - 727273 - | peptidase M24 Rcas_0548 729360 - 728680 - | hypothetical protein TERM 559 728790 - 728848 + g 73 -10.9 -3.61764 | gap 1 CGTTGGTCTCGAATG TCACGCGCTGCATCGGTTGGCGCACACG GCAA CGGGCGCACCAACCGAT-CAGGGCGCCA TTTCCGCGTTCCTCG TERM 560 729234 - 729265 + g 75 -13.7 -3.01924 | gap 1 GTGCGCGCGCAACGC CAGGCGCAGCGCGC CGCTT GCG-GCTGCGCCGG TATTCACGAACAATC Rcas_0549 730361 - 729492 - | apurinic endonuclease Apn1 TERM 561 731075 - 731093 + G 81 -7.3 -4.4648 | overlap 731067 AGCTCTGGTTGGTGA CCGGCGG GGTGA CCGGCGG TTTTCTGCTGACGCT Rcas_0550 730693 - 731811 + | anti-sigma-factor antagonist TERM 562 732956 - 732926 - g 73 -13.2 -3.14211 | opp_overlap 732922 732949 AGGCGTCTCCACGAA TTGCCGCCGCCGAC ATG GTCGGCGACCGCCA GCGTTGGTCTTGGAT Rcas_0551 731981 - 733348 + | phosphoribosylamine--glycine ligase TERM 563 733970 - 734025 + G 74 -13.8 -2.86011 | overlap 733953 733959 733970 733983 733985 GCTGCGCGGGCGCGG CGACCGCCGGAGTCTGGCGGCGCGCT GGCG GGCGCGTTGTCCGGTTCTGGCAGGCG TCGTCTTTACCGTTC Rcas_0552 733329 - 734648 + | RNA methyltransferase Rcas_0553 734829 - 735470 + | hypothetical protein Rcas_0554 736560 - 735511 - | alanine racemase domain-containing protein TERM 564 740108 - 740139 + G 72 -8 -4.12902 | opp_overlap 740079, overlap 740081 740137 CTCGGCTCGGTCGCG CTGAGTGTGTCCGG CAAC CTGTATACGCTCAG TTTTACAACTGCTTC Rcas_0555 737240 - 742033 + | laminin G, domain-containing 2 TERM 565 742146 - 742090 - T 82 -11.6 -3.90464 | gap 1, opp_overlap 742107 742111, overlap 742087 742091 742107 742111 GCCCAAACAATACAA CCGTTGGGCTGACCAGAGCAAGGGCGC GGTA GCGCCCTTGCTCTGGTGAGTG-AATGC CCGCGACCAACCCCG TERM 566 742145 - 742091 - T 79 -15.1 -2.93555 | gap 1, opp_overlap 742107 742111, overlap 742087 742090 742107 742111 CCCAAACAATACAAC CGTTGGGCTGACCAGAGCAAGGGCGC GGTA GCGCCCTTGCTCTGGTGAGTG-AATG CCCGCGACCAACCCC TERM 567 742130 - 742107 - T 86 -18.2 -2.78384 | opp_overlap 742107 742111, overlap 742091 742090 742111 GTTGGGCTGACCAGA GCAAGGGCGC GGTA GCGCCCTTGC TCTGGTGAGTGAATG TERM 568 742107 - 742130 + T 86 -18.2 -2.81133 | opp_overlap 742107 742091 742090 742111, overlap 742111 GTTGGGCTGACCAGA GCAAGGGCGC GGTA GCGCCCTTGC TCTGGTGAGTGAATG TERM 569 742111 - 742126 + T 72 -11.8 -3.29947 | opp_overlap 742107 742091 742090 742111, overlap 742107 GGCTGACCAGAGCAA GGGCGC GGTA GCGCCC TTGCTCTGGTGAGTG TERM 570 742126 - 742111 - T 72 -11.8 -3.29471 | opp_overlap 742111 742107, overlap 742107 742091 742090 GGCTGACCAGAGCAA GGGCGC GGTA GCGCCC TTGCTCTGGTGAGTG Rcas_0556 743223 - 742405 - | hemolysin A Rcas_0557 743711 - 743223 - | hypothetical protein Rcas_0558 744925 - 743735 - | Formyl-CoA transferase Rcas_0559 745047 - 746570 + | AMP-dependent synthetase and ligase TERM 571 748889 - 748926 + G 70 -9.8 -3.54459 | gap 1, overlap 748890 CGGGTATCGTGTGCT CCTGCCGACGCGCCGCG TCTGC TGCGG-GCGTCCGCAGA TTTCGAAGGGATTGC Rcas_0560 746583 - 749513 + | FAD linked oxidase domain-containing protein TERM 572 749706 - 749672 - f 73 -9.9 -3.60094 | overlap 749659 749673 CACAGAGAAGTAGAA TCTCTGGCGGCGGCA GGAGA TGCCGCCGGTAGAGG AAAGAAACTCAAAGC TERM 573 749705 - 749673 - f 73 -13.4 -2.75333 | overlap 749659 749672 ACAGAGAAGTAGAAT CTCTGGCGGCGGCA GGAGA TGCCGCCGGTAGAG GAAAGAAACTCAAAG TERM 574 749814 - 749757 - f 71 -7.5 -4.15669 | gap 1, opp_overlap 749761, overlap 749759 749760 AAGCCAGAAAGTAAA CAGCGCGGTCGGCGC-GTGGCGATCAGC GAC GATGATCCCCGCAGCGCGGACCGCTTTT TATTCGATGCCACAT TERM 575 749812 - 749759 - f 73 -10.1 -3.66401 | gap 1, opp_overlap 749761, overlap 749757 749760 GCCAGAAAGTAAACA GCGCGGTCGGCGC-GTGGCGATCAGC GAC GATGATCCCCGCAGCGCGGACCGCTT TTTATTCGATGCCAC TERM 576 749811 - 749760 - f 73 -13.6 -2.79117 | gap 1, opp_overlap 749761, overlap 749759 749757 CCAGAAAGTAAACAG CGCGGTCGGCGC-GTGGCGATCAGC GAC GATGATCCCCGCAGCGCGGACCGCT TTTTATTCGATGCCA TERM 577 749761 - 749810 + F 100 -19.3 -5.10461 | gap 1, opp_overlap 749760 749759 749757 CAGAAAGTAAACAGC GCGGTCGGCGC-GTGGCGATCAGC GAC GATGATCCCCGCAGCGCGGACCGC TTTTTATTCGATGCC TERM 578 749892 - 749924 + G 80 -15 -3.14132 | opp_overlap 749890 749889 ACCGAACTCAAACGT CTGGTCGTTGGC CGTCCGCTC GCCAACGACCAG TTAGTCCACGAGCGA Rcas_0561 749871 - 751715 + | amino acid permease-associated region Rcas_0562 752532 - 751900 - | hypothetical protein TERM 579 752165 - 752192 + g 74 -9 -3.90112 | opp_overlap 752166, overlap 752166 CCGAAGACGTAAGCG AGCACGCTACCC GTGC GGGTGGCGAGCG TTTGGTTGGCGCGCG TERM 580 752166 - 752191 + g 70 -12.5 -2.93853 | opp_overlap 752166, overlap 752165 CGAAGACGTAAGCGA GCACGCTACCC GTGC GGGTGGCGAGC GTTTGGTTGGCGCGC TERM 581 752883 - 752851 - R 78 -6.4 -4.64676 | gap 1, opp_overlap 752879 752880 CGATCCTGAACAAAA GCGCTCAA-AGCA CGTCAGGC CGCTCTTGAGCGC CGGTGGCGCATTTGC TERM 582 753264 - 753307 + r 70 -10.3 -3.53444 | overlap 753265 ATGGGCAGGGATGGA CCGGG-CGCGCTGAGGGAGAC CGGC GTCTC-TTCCGCGCGTCCCGA TTTCCCCAGCAATGA TERM 583 753265 - 753306 + r 73 -13.8 -2.71924 | overlap 753264 TGGGCAGGGATGGAC CGGG-CGCGCTGAGGGAGAC CGGC GTCTC-TTCCGCGCGTCCCG ATTTCCCCAGCAATG Rcas_0564 753630 - 753334 - | hypothetical protein TERM 584 753580 - 753560 - G 70 -10.3 -3.64198 | overlap 753573 CTCCCAGACATAGAA CGGTGCGGC AAC ACCGCGCCG AGCAGCACTGCGACA Rcas_0565 754709 - 753636 - | band 7 protein Rcas_0566 755361 - 756941 + | NADH dehydrogenase (quinone) Rcas_0567 756980 - 759502 + | hypothetical protein TERM 585 759784 - 759826 + F 82 -12.8 -3.59979 | gap 2 ATGGGCACCCCGAGC CGC-GCGAGGGGTC-GGGCG CGACC CGCTCAGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 586 760008 - 759969 - f 70 -10 -3.54543 | gap 1, opp_overlap 759974, overlap 759971 759974 ATCGACTTGGCGAAA GATTACTCTGTCGCTGCCG TGA CGGCGGCG-CAGAGTTATT CATACAGCCACCTCA TERM 587 760006 - 759971 - f 76 -12.6 -3.35046 | gap 1, opp_overlap 759974, overlap 759969 759974 CGACTTGGCGAAAGA TTACTCTGTCGCTGCCG TGA CGGCGGCG-CAGAGTTA TTCATACAGCCACCT TERM 588 759974 - 760003 + F 95 -16.5 -3.71848 | gap 1, opp_overlap 759971 759969 759974 CTTGGCGAAAGATTA CTCTGTCGCTGCCG TGA CGGCGGCG-CAGAG TTATTCATACAGCCA TERM 589 760003 - 759974 - f 79 -14.3 -2.84325 | gap 1, opp_overlap 759974, overlap 759971 759969 CTTGGCGAAAGATTA CTCTGTCGCTGCCG TGA CGGCGGCG-CAGAG TTATTCATACAGCCA TERM 590 760080 - 760099 + G 79 -8.5 -4.36914 | CACGCCGGGCACGAT CCCGGCG CCGCAA CGCTGGG TTTTCTGACCGCCAG Rcas_0568 760029 - 760400 + | hypothetical protein Rcas_0569 760634 - 762010 + | winged helix family two component response transcriptional regulator Rcas_0570 762152 - 763159 + | hypothetical protein Rcas_0571 763378 - 763680 + | nitrogen regulatory protein P-II TERM 591 764106 - 764139 + G 89 -17.5 -3.14564 | GCTCTTCGCCCGGAT TGGACGACCGCACTG CGTT CACTGCGGTCGTCCG TTGATCCGCCAGTCG TERM 592 764563 - 764579 + G 75 -3.5 -4.88407 | overlap 764564 CCTGCAACGATTGGG GCGCTCG AAC CGCGCGA TTTTTCGTTCAATAA TERM 593 765657 - 765690 + G 78 -5.1 -4.77036 | gap 1, opp_overlap 765647, overlap 765658 765659 CAAACGCGCGATTCC TGTGCCGC-GCCGACG GCG CTCCGGCAGCGGCAGG TTTTTGATGATCAAA TERM 594 766022 - 766043 + G 75 -2.8 -4.86621 | overlap 766026 CCCCCGAAGCGCGCG CGCGCGGC TATGAC GCCGGTCG TTTTTCGTTCAACAT Rcas_0572 763756 - 766686 + | excinuclease ABC, A subunit Rcas_0573 767073 - 766690 - | HEPN domain-containing protein Rcas_0574 767422 - 767060 - | DNA polymerase beta subunit Rcas_0575 767814 - 767419 - | HEPN domain-containing protein Rcas_0576 768166 - 767801 - | DNA polymerase beta subunit TERM 595 769259 - 769311 + G 79 -9.2 -4.20042 | gap 1, opp_overlap 769254, overlap 769306 GTCGTGGAAACGCGC GCGTCGCCGAAGCAAGAGCGACG TTTCTCCT TGTTGCCGTTGCTT-GGCGGCGC TTTTGCGCTGTTGCT TERM 596 769741 - 769712 - g 72 -7.2 -4.20025 | AAGGCGCAAGATAAA TTGCGCGAACTC CAGCGT GAGTTGACGCAA GCGGAAAAGGCTGGC Rcas_0577 768278 - 769840 + | serine/threonine protein kinase TERM 597 770660 - 770678 + G 70 -10.2 -3.60818 | GGATTGTTCGCATTC GCGCTGGG CGC CGCAGCGC TTTACCCCCTTTTCG Rcas_0578 769850 - 771181 + | cell cycle protein Rcas_0579 771521 - 773257 + | peptidoglycan glycosyltransferase Rcas_0580 773254 - 774213 + | TPR repeat-containing protein Rcas_0581 775699 - 774413 - | citrate synthase I TERM 598 775791 - 775770 - R 73 -10.1 -3.64703 | CGGTCGTGAGCCAAA CGGCGAGAA ATCA TGCTCGCCG ACAACTCCCTGGCGC TERM 599 776557 - 776522 - R 100 -16.3 -5.24129 | gap 1 GCGCGGGATAAAAAA GACCACCGC-ACAGGC GCTCT ACCTGTAGCGGTGGTC ATCGACCAACACCCG Rcas_0582 776823 - 776578 - | hypothetical protein TERM 600 776895 - 776908 + H 75 -8.1 -4.20834 | GCTCCTGAGAGATGT CCGCA TCCC TGCGG TTTCGTTGTTTTGAG Rcas_0583 777059 - 778198 + | acyl-CoA dehydrogenase domain-containing protein Rcas_0584 778258 - 778824 + | hypothetical protein TERM 601 779041 - 779076 + T 70 -9.8 -3.41738 | gap 1, opp_overlap 778996, overlap 779026 779023 779039 779036 CGTCGGGCTGTGCGG CGTCGCAG-GACACACC GAT GTTGTGTTATTGCGACG TGTATTTCTTGGCAA Rcas_0585 779931 - 779287 - | phosphate uptake regulator, PhoU Rcas_0586 780776 - 779958 - | phosphate ABC transporter, ATPase subunit TERM 602 780266 - 780309 + g 81 -12.4 -3.86372 | gap 2, opp_overlap 780265 780264, overlap 780294 780296 GCGCGATGCACAAGC GCTGCTGCTGCCC-GC-CGG AGAGCG CCGTGCCGGGCTGCTGCAGC TTGTCTTTGACTTCA Rcas_0587 782035 - 780776 - | phosphate ABC transporter, inner membrane subunit PstA Rcas_0588 782991 - 782032 - | phosphate ABC transporter, inner membrane subunit PstC TERM 603 782935 - 782961 + g 78 -15 -3.05384 | overlap 782957 GCCACGCAGGTTGAT CGCACTGCCGCC TAC GGCGGCCGCGCG TTCGATACCGACACG TERM 604 783128 - 783183 + r 84 -11.3 -4.053 | gap 3, opp_overlap 783134 783135, overlap 783106 783140 CAGCATATGGTGAGC CGATAACGCTTTCCGACCGGCGACAGGG CAG CCCTGTCGCCGGTCG-ATA--GTTCCCG TTTGTGTCCGCTGCT TERM 605 783179 - 783134 - R 93 -16.9 -3.32963 | gap 1, opp_overlap 783106 783128 783140, overlap 783135 ATGGTGAGCCGATAA CGCTTTCCGACCGGCGACAGGG CAG CCCTGTCGCCGGTCG-ATAGTT CCCGTTTGTGTCCGC TERM 606 783178 - 783135 - R 95 -20.4 -2.59564 | gap 1, opp_overlap 783106 783128 783140, overlap 783134 TGGTGAGCCGATAAC GCTTTCCGACCGGCGACAGGG CAG CCCTGTCGCCGGTCG-ATAGT TCCCGTTTGTGTCCG TERM 607 783140 - 783174 + r 100 -25.8 -2.77994 | opp_overlap 783135 783134, overlap 783128 AGCCGATAACGCTTT CCGACCGGCGACAGGG CAG CCCTGTCGCCGGTCGA TAGTTCCCGTTTGTG Rcas_0589 785224 - 783215 - | phosphate binding protein TERM 608 785510 - 785483 - H 72 -11.9 -3.30771 | GCACATCCGGTACAA GCCGGCGTCGC CGCGTT GCGGCGCCAGC GCCTGATCATGACGT Rcas_0590 785537 - 787186 + | anti-sigma-factor antagonist Rcas_0591 787497 - 787835 + | hypothetical protein Rcas_0592 787965 - 789515 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 609 789768 - 789750 - gf 74 -12.4 -3.18912 | opp_overlap 789746 789767 CCACGGATCGATCAA CAGCGCGA TTG CCGCGCTG CGCTATGGCGCCTTT TERM 610 789882 - 789914 + GF 76 -10.6 -3.73224 | gap 1, opp_overlap 789850 789849 789899, overlap 789882 789885 ACGCACGGAATTGCT CC-AGCGCATCAGCG AAAG CGCTCGTGCGCTCGG TTTGATCGAGAGTGG Rcas_0593 789484 - 790287 + | two component transcriptional regulator Rcas_0594 790349 - 791290 + | pyruvate carboxyltransferase Rcas_0595 791541 - 793025 + | hypothetical protein Rcas_0596 793317 - 795419 + | Pyrrolo-quinoline quinone Rcas_0597 795416 - 796015 + | hypothetical protein TERM 611 796042 - 796025 - T 91 -14.1 -3.89346 | opp_overlap 796021 796020, overlap 796006 CGCTGAGCGTACAAA GCCCCGC ACCG GCGGGGC TGGGATTGATACATA TERM 612 796174 - 796150 - T 71 -9.2 -3.74872 | opp_overlap 796152 796171, overlap 796152 ACCCAGGCGAGCAAA CAGCAGGGCG GCTAG CGCCCCGCTT ATCGCGCCCGATGAC TERM 613 796172 - 796152 - T 74 -11.8 -3.4582 | opp_overlap 796152 796171, overlap 796150 CCAGGCGAGCAAACA GCAGGGCG GCTAG CGCCCCGC TTATCGCGCCCGATG Rcas_0598 797735 - 796230 - | Alpha-N-arabinofuranosidase TERM 614 796491 - 796478 - G 81 -3.8 -4.99861 | opp_overlap 796478, overlap 796469 GATGAACCACAAAAA TGGC GCCCTT GCCA TGTTCAGCATCGTAG Rcas_0599 798895 - 798218 - | haloacid dehalogenase, type II Rcas_0600 799747 - 799136 - | hypothetical protein Rcas_0601 802399 - 799871 - | ATP-dependent DNA helicase RecG TERM 615 801417 - 801392 - G 81 -2.3 -5.1963 | opp_overlap 801392 801407, overlap 801394 801406 TTGAATGAACAAAAA CTCGTCGAAGC CAAG GCGCCGGCGCG CTTGTTCAAGCATAT Rcas_0602 803254 - 802409 - | degV family protein Rcas_0603 804106 - 803258 - | degV family protein Rcas_0604 805694 - 804144 - | Dak phosphatase Rcas_0605 806053 - 805694 - | hypothetical protein TERM 616 805805 - 805757 - G 85 -14.4 -3.60475 | AAGGTCGAGCGTAAA CGACAGCGCGGCGCGCACGGCA GATTG TGCGGCGCGCGCCACATCGGCG ATGGATCTGCCGGTC Rcas_0606 806155 - 806361 + | ribosomal protein L28 TERM 617 806384 - 806410 + T 100 -20.2 -4.05446 | GAGACCGATCGCTCA GGCTGGCGTCGC ATG GCGATGCCAGCC TTTCTCATTGAACGA Rcas_0607 807268 - 806453 - | Cof-like hydrolase TERM 618 807112 - 807082 - GT 71 -9 -3.68024 | overlap 807077 CCTGGTAACAGATAA TCGGCGCGCGAA TATCGAG TTCGCGCGCAAA CGGCAGTGCTGCGCC Rcas_0608 808280 - 807243 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Rcas_0609 808343 - 808546 + | hypothetical protein Rcas_0610 808534 - 809511 + | hypothetical protein Rcas_0611 810966 - 809530 - | aldehyde dehydrogenase TERM 619 810744 - 810785 + g 75 -11.6 -3.61398 | gap 2, overlap 810763 TGCTGGCGGCAATGG CGCGCAGTGCG--GCAGCAC GGCG GTGCAGCGGCGTGCTGCGCG TTGTTCGGAACGCCG TERM 620 811281 - 811336 + H 100 -20.6 -3.33162 | gap 1, opp_overlap 811278 GCCGGTCATAGAGCG GAGATCTGGCGACGCGCGATATGCTTC ATT GTAGCACATCGCGCGTCGC-ACGTCTC TTATGCGCTGCCATA Rcas_0613 811647 - 812636 + | SCP-like extracellular Rcas_0614 813941 - 812733 - | hypothetical protein Rcas_0616 815781 - 815092 - | integrase family protein TERM 621 815673 - 815709 + g 74 -5.6 -4.49556 | overlap 815692 TGCGGATGGAGGAGC CGCGCAGGCGGATGTC CGAGC GGCGGCGGTCGGCGCG TTTCTTTGCTGACAG TERM 622 815900 - 815861 - H 82 -13 -3.59023 | gap 1 TCGAGATAATCACAA GTTATACGGAACGC-GAGC GCA GCGAAGCGTTCCGTATAAC GGCGCGGCGGCGCTA TERM 623 815931 - 815900 - H 76 -12.8 -3.29043 | AAGCGTTCCGTATAA CGGCGCGGCGGCGC TAAC GCGCCTCCGCTGCG CGCAGCTCAACCGCC Rcas_0617 816260 - 816607 + | transcriptional modulator of MazE/toxin, MazF Rcas_0618 816723 - 817325 + | hypothetical protein Rcas_0620 818837 - 819718 + | hypothetical protein Rcas_0621 820906 - 819773 - | anti-sigma-factor antagonist Rcas_0622 821904 - 820924 - | terpene synthase metal-binding domain-containing protein Rcas_0623 822768 - 821932 - | methyltransferase type 11 TERM 624 822575 - 822585 + g 74 -5.4 -4.65895 | overlap 822564 AGCGTTTGCCCTGTG GTCA GAT TGAC TTTTTCGATAAGCAG Rcas_0624 824105 - 822993 - | beta-lactamase TERM 625 823400 - 823362 - G 70 -7.4 -3.97689 | gap 1, overlap 823363 CACAACCTGAAAGAA GCGCGCAACGT-CTCGC GCTGTG GCGAGCACGCTGCCGGC CGGATGTGTCTGTCG Rcas_0625 825735 - 824389 - | virulence factor MVIN family protein TERM 626 824955 - 824928 - G 71 -12.6 -3.02043 | overlap 824915 AACCGGCGTTGAAGA GCGCTGGCAGCG CCCC CGCTTCCCGCGC CAGCGAGGCGAATGC Rcas_0626 826733 - 825732 - | uroporphyrinogen decarboxylase Rcas_0627 827454 - 828326 + | prolipoprotein diacylglyceryl transferase Rcas_0629 829371 - 828865 - | hypothetical protein Rcas_0630 829664 - 829371 - | hypothetical protein TERM 627 829832 - 829844 + r 76 -10.5 -3.72576 | GCAGTGGCGTCAGCG GCCCC GGC GGGGC TTTCCTCAGCGAGGG Rcas_0631 831889 - 830213 - | hypothetical protein Rcas_0632 834139 - 832667 - | cobyric acid synthase CobQ Rcas_0633 835200 - 834136 - | aminotransferase class I and II TERM 628 834317 - 834307 - G 73 -8.2 -3.99324 | overlap 834308 CCGCACGAGCATAAA CGGC AGC GCCG CGCGCCAGACGTACA Rcas_0634 835733 - 835179 - | adenosylcobinamide-phosphate guanylyltransferase Rcas_0635 837133 - 835730 - | cobyrinic acid a,c-diamide synthase TERM 629 835886 - 835859 - G 83 -12 -4.07568 | gap 1, overlap 835860 TGCTCCTTCGGAAAA CGCTGCCGGACGC ATA GCGTCGGGCAG-G CAGGTGTAGAGCCGG Rcas_0636 837948 - 837133 - | uroporphyrin-III C-methyltransferase TERM 630 837364 - 837331 - G 73 -13.1 -3.14132 | gap 1, opp_overlap 837326 837325 TCCGCGGCTGATCAA CGCCGCCGGG-GTG TGCGGGT CGCGCCCGGCGGCG ATGAGGTTTGCGCAG TERM 631 837894 - 837920 + g 77 -3.7 -4.83243 | overlap 837861 837857 GACCGGCGCCGACCA GGTATGCTTTG CCGGT CATAGCATGTC TTTCTTTTGTGTCAC Rcas_0637 840506 - 837993 - | precorrin-3B C17-methyltransferase TERM 632 840248 - 840262 + g 91 -9.2 -4.49337 | opp_overlap 840248 CATCGAGGCAGACGA CCGCCG GAT CGGTGG TTTTATGGCTTATGA Rcas_0638 841318 - 840503 - | precorrin-4 C11-methyltransferase Rcas_0639 842043 - 841315 - | precorrin-2 C20-methyltransferase Rcas_0640 843262 - 842036 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 633 842667 - 842688 + g 72 -12.3 -3.29263 | gap 1, opp_overlap 842666 842663 AGCGGCGCAAATGAC CGCTCTGCCG CTT CGGC-GAGCG TTGTGCGCACAATAT Rcas_0641 844500 - 843259 - | cobalt-precorrin-6A synthase TERM 634 844330 - 844346 + g 71 -9.3 -3.68351 | GCGCTGCATCTCTAC CGGCGTC ATC GTCGCCG TTTCACTGATCGGCA Rcas_0642 845174 - 844506 - | precorrin-8X methylmutase CbiC/CobH Rcas_0643 845692 - 845174 - | multimeric flavodoxin WrbA-like protein Rcas_0644 847258 - 845840 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 635 846825 - 846849 + g 70 -9.9 -3.65812 | TCGGGATCGCTGCTG CCGCGCCCG ATGAGCG CGAGCGCGG TTCTATTGCGGGGAA Rcas_0645 848592 - 847657 - | cobalamin biosynthesis protein CobD Rcas_0646 849327 - 848593 - | cobalt ABC transporter, ATPase subunit TERM 636 848871 - 848885 + g 86 -7 -5.00616 | overlap 848869 848874 TTGCCAGCACACCTG CGAGCG CCA CGCGCG TTTTTTGCCCGCCGC Rcas_0647 850736 - 849675 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Rcas_0648 855192 - 850963 - | cobaltochelatase, CobN subunit TERM 637 851354 - 851389 + g 72 -3.8 -4.59773 | overlap 851355 CGGGTGCGCGGACGC GCCGGGTCGCTGCTGT CGCC AAAGTAGCGCGCCGGA TTTTTGCCGGTCAAG TERM 638 853020 - 853069 + g 76 -13.4 -3.22298 | opp_overlap 853016, overlap 853017 GTGTCAGATGATCGA CGATCACGGCGTGGGCGCGTCG CTTCGC CTGCGTGCCCTCACCGGGATCG TTGATGATGAATGGG Rcas_0649 855989 - 855321 - | cob(I)alamin adenosyltransferase TERM 639 856127 - 856106 - R 71 -5.8 -4.29326 | GGCAAACGGAATAAA CCGGCG AACACACAAG CGCCGG CAACCTTCGACGTTC TERM 640 856200 - 856176 - R 100 -10 -5.4251 | gap 1 TTCAGACATAAAAAA CCCCGG-CCTC TTTC GAGAACCGGGG CGACAGAGCGTGCAG Rcas_0650 857865 - 856636 - | ABC transporter related Rcas_0651 858643 - 858272 - | hypothetical protein Rcas_0652 859657 - 858656 - | hypothetical protein TERM 641 858714 - 858733 + g 74 -12.8 -3.28712 | overlap 858714 CGCAGTCGCTCTTCG GCGGCGGC GCGG GCTGCCGC TTCTGCGGCGCGGGC TERM 642 858714 - 858766 + g 74 -12.6 -3.36273 | overlap 858714 CGCAGTCGCTCTTCG GCGGCGGCGCGG-GCTGCCGCTTCTG CGG CGCGGGCGGCGGCTTCGCGCCGG-GC TTGCTCTTCGGCGGC TERM 643 858777 - 858829 + g 74 -12.6 -3.36273 | overlap 858777 CGGGCTTGCTCTTCG GCGGCGGCGCGG-GCTGCCGCTTCTG CGG CGCGGGCGGCGGCTTCGCGCCGG-GC TTGCTCTTCGGCGGC TERM 644 858777 - 858796 + g 74 -12.8 -3.28712 | overlap 858777 CGGGCTTGCTCTTCG GCGGCGGC GCGG GCTGCCGC TTCTGCGGCGCGGGC TERM 645 858840 - 858859 + g 74 -12.8 -3.35996 | CGGGCTTGCTCTTCG GCGGCGGC GCGG GCTGCCGC TTCTGCATACGCCTG Rcas_0653 860126 - 860977 + | metallophosphoesterase TERM 646 861111 - 861088 - g 73 -8.9 -4.03234 | opp_overlap 861089, overlap 861068 861089 TTCCTGGCAGAGAAA CTCGGCAAG CCGATC CTTGCCGAA GGTCCGGCTGGCGTG Rcas_0654 860992 - 861972 + | ATPase TERM 647 862148 - 862127 - g 70 -13.1 -2.90496 | opp_overlap 862105 862125, overlap 862124 CGCTCGCCGAAAGTA TCGACGCAA TGCG TTGCGTCGA AATTGCTGGTGTCGC Rcas_0655 862054 - 863442 + | VWA containing CoxE family protein Rcas_0656 865019 - 863445 - | phosphoglyceromutase TERM 648 864891 - 864929 + g 73 -11 -3.55622 | gap 1, opp_overlap 864889 CAGGGTGAACGGACA CTCGGCGCGCCAGCGGT CATCAA ACGGCTTGCGCGCC-AG TTTGACCCCGTTGCC Rcas_0657 868121 - 865047 - | preprotein translocase, SecA subunit TERM 649 866579 - 866604 + g 78 -15.5 -2.75481 | gap 1 TGCGCCCCGCCTGCG CCACGATGCGCG CTT CGCGC-TCGTGG TACTTGGCGTTCAAC TERM 650 867976 - 867940 - G 74 -9.3 -3.90112 | opp_overlap 867939 867931 867945 867947 GCTTCGGGAAGCAAA TCATCGAGCGTCTCGCC ATC GGCGAGGCGCTGCTTGA ATTCATCGGTTTTTG TERM 651 867945 - 867972 + g 80 -14.2 -3.21466 | gap 1, opp_overlap 867940, overlap 867939 867931 867947 GGGAAGCAAATCATC G-AGCGTCTCGCC ATC GGCGAGGCGCTGC TTGAATTCATCGGTT TERM 652 867947 - 867969 + g 84 -17 -2.79684 | opp_overlap 867940, overlap 867945 867939 867931 GAAGCAAATCATCGA GCGTCTCGCC ATC GGCGAGGCGC TGCTTGAATTCATCG TERM 653 868879 - 868916 + G 88 -3.9 -5.31275 | gap 1 GTTTCTTCTTCCATG CGCATCTGGCGGC-GCTC GAT GTGCCGGCGGCGGTTGCG TTTTTTCTGGTGACG TERM 654 869522 - 869548 + G 74 -13 -3.35813 | GGCTGGCAGCGGTCT CGACGCAGTTGG GCG CTGGCTGCGTCG TTGGTTCGAGTGGCG Rcas_0658 868398 - 870086 + | glycosyltransferase TERM 655 870483 - 870444 - g 88 -17.3 -3.05816 | gap 1, opp_overlap 870447 CGAGGCGTTAGTCAA CGCCTGGTGCGATGATCG CGCAC CGATCATCGCACC-GGTG TTCGCTGGAACACGA TERM 656 870447 - 870481 + G 93 -20.9 -3.08679 | opp_overlap 870444 GGCGTTAGTCAACGC CTGGTGCGATGATCG CGCAC CGATCATCGCACCGG TGTTCGCTGGAACAC Rcas_0659 870070 - 870696 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 657 871365 - 871396 + G 71 -10.9 -3.47227 | gap 1, opp_overlap 871367 CGAAGTGGCGGAAGG GATCGCCGCTCTGC GCGCG GCAG-GCAGCGATC TTCTGATCATTGCCG Rcas_0660 870706 - 871695 + | molybdopterin binding domain-containing protein Rcas_0661 872484 - 871684 - | hypothetical protein TERM 658 872019 - 871963 - G 77 -14.1 -3.39449 | opp_overlap 871962 871973, overlap 871966 GCTCAGCAAGATGAA GTACGGTGCGTCGGGCAGCGGACGCGC CAG GCGGGGGCGCTGCCCGGCGCGCAGCAG GTCGATTTCGAGCAG TERM 659 872016 - 871966 - G 90 -18 -2.85437 | opp_overlap 871962 871973, overlap 871963 CAGCAAGATGAAGTA CGGTGCGTCGGGCAGCGGACGCGC CAG GCGGGGGCGCTGCCCGGCGCGCAG CAGGTCGATTTCGAG TERM 660 871973 - 872024 + g 75 -12.1 -3.53811 | gap 1, opp_overlap 871966 871963, overlap 871962 ATGAAGTACGGTGCG TCGGGCAGCGGACGCGCCAGGCGG GGGCG CTGCCCGGCGCG-CAGCAGGTCGA TTTCGAGCAGGTGAG Rcas_0663 874206 - 874625 + | hypothetical protein TERM 661 874958 - 874940 - g 70 -7.3 -4.09685 | overlap 874941 GTCGAGCTGGGAAAA GTGCGCC GCTAT GGCGCGC AAATACCCGGATCGG Rcas_0664 874653 - 875657 + | amidohydrolase 2 TERM 662 875876 - 875904 + F 100 -16.7 -4.52589 | GAGGTGGTCCGTCAA CCGCCGCTCCC TACTTCT GGGGGCGGCGG TTTTGTGTCAGGAGA Rcas_0665 875925 - 876221 + | hypothetical protein Rcas_0666 876211 - 877029 + | binding-protein-dependent transport systems inner membrane component TERM 663 877399 - 877414 + G 76 -9 -4.07568 | overlap 877385 GCGCCGACGAGGGTA TCACGC GCCC GCGTGA TTTTGCAGGCAAGAA Rcas_0667 877026 - 878015 + | NMT1/THI5-like domain-containing protein TERM 664 878404 - 878433 + G 75 -15 -2.69151 | overlap 878401 TCGACGATTTTGGGT TGGCGGGATGGG GCGATG CCCAACCCGCCA TGCTCTCTGGCGGCA Rcas_0668 878034 - 878801 + | ABC transporter related Rcas_0669 880518 - 878752 - | putative PAS/PAC sensor protein TERM 665 878844 - 878816 - G 76 -9.6 -3.967 | gap 1, overlap 878820 AACCGATCAAGGAAA CGTAT-GCGCTCG ATGC CGAGCGCAATGCG CTGTGCGGCGCTCTC TERM 666 878839 - 878820 - G 72 -13.6 -2.71693 | overlap 878816 GATCAAGGAAACGTA TGCGCTCG ATGC CGAGCGCA ATGCGCTGTGCGGCG TERM 667 879431 - 879411 - G 100 -11.1 -4.91511 | AGGCGACCAGAAAAA CGCCGGC GACGCCT GCCGGCG TACGAATCGGGACAC TERM 668 880328 - 880306 - G 84 -4.1 -5.1356 | gap 1, opp_overlap 880317, overlap 880315 880317 TGTGATCAACAAAAA GGGCAGGAAC AGCG GTTCA-GCCC GCTTCTTGCGCGCCT Rcas_0670 880880 - 880515 - | response regulator receiver protein Rcas_0671 882480 - 880873 - | putative circadian clock protein, KaiC TERM 669 882750 - 882705 - R 88 -14.2 -3.59979 | gap 3, overlap 882706 882709 TTCGCTCAGGGTAAA CGCAGC--GAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC TERM 670 882746 - 882706 - R 84 -17 -2.75844 | overlap 882705 882709 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCGCGGGGTGACCA TERM 671 882744 - 882709 - R 85 -18.4 -2.65354 | gap 1, overlap 882706 882705 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCGCGGGGTGAC Rcas_0672 883212 - 882772 - | hypothetical protein TERM 672 883518 - 883488 - R 100 -28.4 -4.18197 | opp_overlap 883488 883490, overlap 883471 ACGCCGTATTGAAAA CACGCGCCGGCGAG GAC CTCGCCGGCGCGTG TTGGATAGGGGTGCT TERM 673 883488 - 883518 + r 100 -28.4 -3.06302 | opp_overlap 883471 883488, overlap 883490 ACGCCGTATTGAAAA CACGCGCCGGCGAG GAC CTCGCCGGCGCGTG TTGGATAGGGGTGCT TERM 674 883490 - 883516 + r 100 -25.2 -3.08996 | opp_overlap 883471 883488, overlap 883488 GCCGTATTGAAAACA CGCGCCGGCGAG GAC CTCGCCGGCGCG TGTTGGATAGGGGTG Rcas_0673 883819 - 883541 - | histone family protein DNA-binding protein TERM 675 883838 - 883855 + H 74 -4.1 -4.75174 | GCTTGTATCCTTTCC GTCAAAC TATC GTATGAC TTTTTCCCTTCAATA Rcas_0674 884226 - 884588 + | response regulator receiver protein Rcas_0675 885062 - 884661 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_0676 885432 - 885049 - | anti-sigma-factor antagonist TERM 676 885744 - 885775 + G 70 -8 -3.97307 | opp_overlap 885747 885748, overlap 885747 GCGATTTTACTGCCA CAACGTTCGTCGTT TACG AGCGACGCACATTG TTGTTGTTGCATCGC Rcas_0677 885713 - 886150 + | NUDIX hydrolase Rcas_0678 887295 - 886321 - | ROK family protein Rcas_0679 889258 - 887381 - | hypothetical protein TERM 677 889452 - 889437 - H 84 -6 -4.93296 | opp_overlap 889437 GTATCATCATAAAAA CGGCGC AGAG GAGCCG TTCATTCAAAGCACA Rcas_0680 889481 - 890443 + | thioredoxin reductase Rcas_0681 890454 - 891722 + | molybdenum cofactor synthesis domain-containing protein TERM 678 891980 - 891953 - T 82 -11.2 -3.885 | gap 1 ACGGCCACAGAACAA CGCTTCGACGCGC TCA GCGCGCCGC-GCG CCGCGCCATCCGCCA Rcas_0684 893983 - 893804 - | hypothetical protein TERM 679 893914 - 893880 - G 84 -10.7 -4.15044 | gap 1, overlap 893911 GCGGCGCTGAAGAAA GCGCTGA-ACAGGCTC ACGA GCGCCTGAATCAGCGC TTCGAGCAACCAGCG TERM 680 894435 - 894475 + H 73 -14 -2.73364 | opp_overlap 894446 CTTGTCATTCCGAGC GCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GC TGCTTGGGGTGACCA Rcas_0685 894712 - 896211 + | radical SAM domain-containing protein Rcas_0686 899313 - 896218 - | tetratricopeptide domain-containing protein TERM 681 898021 - 898050 + g 70 -10.5 -3.67597 | overlap 898022 CCGGTCATAGTCGAT GCGCGGCGCGAAG CCGG CAGCGCGCCGCGG TTGTTCAATCGGCGC TERM 682 898022 - 898049 + g 72 -14 -2.80344 | overlap 898021 CGGTCATAGTCGATG CGCGGCGCGAAG CCGG CAGCGCGCCGCG GTTGTTCAATCGGCG Rcas_0687 900846 - 899332 - | hypothetical protein TERM 683 900220 - 900192 - G 88 -7.6 -4.8543 | gap 2 GAACGTCGAGAAAAA CCT-GA-TCGGTCT CGA AGACCGAGTCGAGG ATCAGGCAGATCAGG Rcas_0688 902080 - 900839 - | hypothetical protein TERM 684 901831 - 901848 + g 86 -12.7 -4.09685 | AGCACGTGCGGGTGA CGGCGAC GCGC GTCGCCG TTTTGCCGCCTCCCG Rcas_0689 903741 - 902356 - | winged helix family two component response transcriptional regulator TERM 685 902559 - 902584 + g 79 -8.1 -4.26076 | opp_overlap 902556, overlap 902571 CGCAATAGTAGAGTT CACTGCGCGGC ACGC GCCGCGCGCGG TTTTCGTACAGGTAG TERM 686 903526 - 903578 + g 86 -8.4 -4.56597 | gap 2, overlap 903527 AACGACCAGGTGGGT TGGCGGTGCGTTTGGCG-GCAT-CGC CTG GCGCATCAGCGCCAATCGCAGCGCCG TTTTTCCAGAGCCGC Rcas_0690 906129 - 903745 - | hypothetical protein Rcas_0691 908437 - 906335 - | hypothetical protein Rcas_0692 909591 - 908449 - | hypothetical protein TERM 687 909939 - 909894 - R 77 -11.2 -3.59979 | gap 3, overlap 909895 909898 TTCGCTCAGGGTAAA CGCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 688 909938 - 909895 - R 77 -14.7 -2.75844 | gap 3, overlap 909894 909898 TCGCTCAGGGTAAAC GCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 689 909933 - 909898 - R 78 -15.4 -2.65354 | gap 1, overlap 909895 909894 CTCAGGGTAAACGCA GCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_0693 910910 - 910056 - | hypothetical protein TERM 690 911667 - 911612 - g 70 -11.9 -3.1552 | gap 3, overlap 911610 GGTGACCCACGAACA CGACG-TC-GCCCGTCACGCGGAGCGGA TCA TCCACAT-GCGCGACGGGCAGATCGCCG AGGTTACAGCACGCG Rcas_0694 910995 - 911687 + | ABC transporter related Rcas_0695 914577 - 911671 - | peptidase M16C associated domain-containing protein TERM 691 912403 - 912437 + g 70 -9.9 -3.58522 | gap 1, opp_overlap 912426 GCTGCGATCGATCAG CCGCGCGCGCATGTGC TCAA GCACG-GCGCGCACCG TTTCCCACTCCTCAT TERM 692 913575 - 913609 + g 71 -5.8 -4.36914 | opp_overlap 913573 CGACGGTAAAGTAGG TCTGACGCAGA-CGGG CGAAT CCCGATCCG-GTCAGA TTTTCTCCCAGACCA TERM 693 914986 - 914956 - H 79 -7.6 -4.4715 | TCTGAAGCCATAAAA CATCGATCATCCAT AAG ATGAAAGAACGATG AGAATTCTTTTCAAA TERM 694 915292 - 915279 - g 74 -5.2 -4.59773 | GCGGATGCTGAAAAA CCGC GAACTG GCGG AGGAGGTTGTCCAGG Rcas_0696 915103 - 915738 + | ECF subfamily RNA polymerase sigma-24 factor TERM 695 915799 - 915824 + F 84 -6.1 -5.00616 | gap 1, overlap 915800 915801 ATCGGATTTGAGGTC CA-GCGCTCCCT GAG AGGGGGCGCATC TTTTTTGCCCGGCAG TERM 696 915800 - 915822 + F 84 -11.2 -4.13561 | overlap 915799 915801 TCGGATTTGAGGTCC AGCGCTCCCT GAG AGGGGGCGCA TCTTTTTTGCCCGGC TERM 697 915801 - 915821 + F 80 -14.7 -3.07655 | overlap 915800 915799 CGGATTTGAGGTCCA GCGCTCCCT GAG AGGGGGCGC ATCTTTTTTGCCCGG TERM 698 916288 - 916265 - g 70 -11.6 -3.12351 | opp_overlap 916260 916259 TGCCGCCAGAGGGAA TGGCAGCGGC GCGC GCCGCCGCCT CGCCTGCCATGACCG Rcas_0697 915946 - 917466 + | AMP-dependent synthetase and ligase TERM 699 918306 - 918283 - g 85 -10.4 -4.36914 | gap 1 TGGGCGCCCATAAAA CCTCGATGCTC CAG GA-CATCGAGG CTGGCAGAGCGACGG Rcas_0698 917463 - 918461 + | 2-dehydropantoate 2-reductase Rcas_0699 921723 - 918439 - | transcriptional activator domain-containing protein TERM 700 918956 - 918940 - G 79 -9.3 -4.20367 | CCGCCGAATAAAGAA CGGCGCG ACA CGCGGCG GTCGGCGCGGTTCCA Rcas_0700 921812 - 922105 + | hypothetical protein Rcas_0701 923126 - 922383 - | 3-ketoacyl-(acyl-carrier-protein) reductase Rcas_0702 924569 - 923379 - | acetyl-CoA acetyltransferase Rcas_0703 925010 - 925555 + | GCN5-related N-acetyltransferase Rcas_0704 925606 - 926310 + | 2-phosphosulfolactate phosphatase Rcas_0705 926584 - 926973 + | HEPN domain-containing protein Rcas_0706 926930 - 927289 + | DNA polymerase beta subunit TERM 701 928076 - 928103 + G 71 -11.3 -3.40597 | gap 1, overlap 928076 928074 TGAATATTTCCAGGG C-GCACCGGGCG ATGTG CGCCTGGTGCAG TATTTCGATAAGGCG TERM 702 928698 - 928727 + G 77 -13.5 -3.30243 | gap 1, overlap 928715 GTTCTCTGGCGCTAT GGGCGCCCGCTGCG CTA CGCGGCGC-CGCCC TTCTCCGGCGTGCGT Rcas_0707 927867 - 929996 + | hypothetical protein Rcas_0708 930631 - 931812 + | hypothetical protein Rcas_0709 932092 - 933087 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 703 933204 - 933228 + G 73 -2.8 -4.67556 | gap 1, overlap 933207 CGGTCGCGGCGAGCG CATGACCGCTG AAGC CGCCGGTC-TG TTTTTCGACTATTCT Rcas_0710 933091 - 934722 + | glucose-6-phosphate isomerase TERM 704 934774 - 934731 - T 70 -10.5 -3.55444 | opp_overlap 934732 934734 934764, overlap 934734 GTTGTAGTGTGGAAA GCATG-GCTCCATCGCATCCT GGAA AGGA-GCGATGGAGCGCATAT TCGGTCCTATCATAC TERM 705 934771 - 934734 - T 79 -14.4 -2.91144 | opp_overlap 934734 934732 934764, overlap 934731 GTAGTGTGGAAAGCA TG-GCTCCATCGCATCCT GGAA AGGA-GCGATGGAGCGCA TATTCGGTCCTATCA TERM 706 934734 - 934771 + T 80 -14.4 -3.11768 | opp_overlap 934731 934734, overlap 934732 934764 GTAGTGTGGAAAGCA TG-GCTCCATCGCATCCT GGAA AGGA-GCGATGGAGCGCA TATTCGGTCCTATCA Rcas_0712 935575 - 935342 - | hypothetical protein Rcas_0713 935682 - 936245 + | hypothetical protein Rcas_0714 936250 - 936900 + | peptidase M22 glycoprotease TERM 707 937725 - 937746 + G 73 -7.1 -4.29738 | opp_overlap 937714 TCAACCGACGCATTG CCGCCAGCG ATGT CGCAGCCGG TTTTCGTCAGTATGG TERM 708 938090 - 938076 - g 73 -11.4 -3.53811 | opp_overlap 938075 938074 TCGATGTGTCGGAAA CCAGCG CGG CGCTGG CGTTTGTGATGGAGT Rcas_0715 937061 - 938851 + | aldehyde ferredoxin oxidoreductase TERM 709 939436 - 939454 + G 73 -3 -4.77165 | opp_overlap 939422, overlap 939437 939438 AGGCGCTCGACCGTT TGCCGCAG CGA CTGTGGAG TTTTCTTGTCGAGCG Rcas_0716 938943 - 939716 + | hypothetical protein TERM 710 940317 - 940338 + G 93 -2.3 -5.55695 | gap 1, overlap 940311 TTTCACCATCCTGTT GCCGGT-ATT GTT GATGATCGGC TTTTTTGTCTTCTTC Rcas_0717 939958 - 941874 + | ATP-dependent metalloprotease FtsH TERM 711 941896 - 941926 + F 83 -17.6 -2.68986 | opp_overlap 941891, overlap 941888 941896 AGCACAACCACTTCT GGAACGGGGGAGGC TTT GCCTCCCCTGTTCG CTTGTCGTATGCTAT TERM 712 941896 - 941927 + F 100 -17.4 -3.49114 | gap 1, opp_overlap 941891, overlap 941888 941896 AGCACAACCACTTCT G-GAACGGGGGAGGC TTT GCCTCCCCTGTTCGC TTGTCGTATGCTATA Rcas_0718 941999 - 942766 + | hypothetical protein Rcas_0719 942770 - 943276 + | crossover junction endodeoxyribonuclease RuvC Rcas_0720 943302 - 943979 + | methyltransferase type 11 Rcas_0721 943986 - 944264 + | hypothetical protein Rcas_0722 945893 - 944319 - | glycosyl transferase group 1 Rcas_0723 946098 - 946832 + | GCN5-related N-acetyltransferase Rcas_0724 946886 - 948151 + | Glu/Leu/Phe/Val dehydrogenase Rcas_0725 949180 - 948194 - | ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein TERM 713 948584 - 948548 - G 83 -8 -4.58685 | overlap 948550 AAAGGCGGTGAAAAA GAGCCAGA-CGGCGATGG CAG CCAACGCCGCTGTGGC-C GGTTGGCGAAAGACG TERM 714 948583 - 948550 - G 81 -11.7 -3.90316 | gap 1, overlap 948548 AGGCGGTGAAAAAGA GCCAGA-CGGCGATGG CAG CCAACGCCGCTGTGGC CGGTTGGCGAAAGAC Rcas_0726 950114 - 949164 - | ABC transporter related TERM 715 949291 - 949310 + g 80 -15 -3.14647 | opp_overlap 949288 GCGCGCGCAATATCG GCGCGCAG GTCG CTGCGCGC TTCGATGTGATAGGT Rcas_0727 951315 - 950128 - | hypothetical protein TERM 716 951622 - 951580 - H 73 -10.5 -3.59979 | overlap 951581 951584 TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCGCGC-GCT GCTCGGGGTGACCAT TERM 717 951621 - 951581 - H 73 -14 -2.75844 | overlap 951580 951584 TCGCTCAGGGTAAAC GCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCGCGC-GC TGCTCGGGGTGACCA TERM 718 951619 - 951584 - H 78 -15.4 -2.65354 | gap 1, overlap 951581 951580 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCGCGC GCTGCTCGGGGTGAC TERM 719 951811 - 951845 + G 73 -8.5 -4.0641 | TGTCGCACATGAATC CCGATTGTGCGTATC TTCTT GAGGCGCACGAACGG TTTCTCTACGTAGCG Rcas_0728 951804 - 952376 + | response regulator receiver protein TERM 720 952373 - 952359 - T 79 -12.8 -3.42699 | opp_overlap 952355 ATGCATTCACGAGAA CGCGCC ATC GGCGCG TGAGGTTCTATGTCG Rcas_0729 952956 - 952381 - | SNARE associated Golgi protein Rcas_0730 953764 - 952988 - | putative transmembrane anti-sigma factor Rcas_0731 954426 - 953821 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_0732 956960 - 954522 - | integral membrane sensor signal transduction histidine kinase TERM 721 957645 - 957684 + G 70 -10 -3.57561 | GATCGACACCCGCGT CGGACTGGCGGTGGTGAT CGGC ATTGCCACCATCATTCCG TTTGCCACATTGCCC Rcas_0733 957451 - 958908 + | O-antigen polymerase Rcas_0734 960385 - 959306 - | threonine aldolase TERM 722 960670 - 960696 + H 73 -13.6 -2.71731 | opp_overlap 960650 GCGACGCCATGGTCG GGCGCCTCGCGT CTC ACGCCTGGCGCC TCGTTGCGAGATAAA TERM 723 960817 - 960843 + H 73 -13.6 -2.71731 | opp_overlap 960797 GCGACGCCATGGTCG GGCGCCTCGCGT CTC ACGCCTGGCGCC TCGTTGCGAGATAAA Rcas_0735 961278 - 962144 + | methenyltetrahydrofolate cyclohydrolase TERM 724 962696 - 962729 + F 77 -11.8 -3.61715 | gap 1 GTGTGGACGAGCGCA GGGGATCA-CGGGGC AGGTC GCTCTGATGATCCCC TTCTTCACGACAGTG Rcas_0736 962721 - 963785 + | nucleotidyl transferase TERM 725 963916 - 963904 - g 78 -4.7 -4.70659 | CGGCACATTCAAAAA CGGCG AAA CGCGG GTCAAGGTCGAGGAA Rcas_0737 963791 - 964729 + | ribose-phosphate pyrophosphokinase Rcas_0738 964763 - 966070 + | CBS domain-containing protein Rcas_0739 966063 - 966476 + | cytidine deaminase TERM 726 966553 - 966595 + T 88 -13.5 -3.59979 | overlap 966554 966556 ATGGTCACCCTGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 727 966554 - 966594 + T 84 -17 -2.75844 | overlap 966553 966556 TGGTCACCCTGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 728 966556 - 966591 + T 85 -18.4 -2.65354 | gap 1, overlap 966554 966553 GTCACCCTGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_0740 969319 - 966821 - | nucleotidyl transferase TERM 729 968307 - 968334 + g 76 -6.9 -4.43012 | opp_overlap 968308 968324, overlap 968308 GTCTGATCGCCGACA ACCGTGCCCTC AAAGAG GACGGCACGGC TTTTGATGTTGCACT TERM 730 968753 - 968764 + g 73 -3.6 -4.70659 | GTCTTTCGACCAGTC GGTG AACG CGCC TTTTTCGATATAGCG TERM 731 969506 - 969547 + r 78 -10.8 -3.89501 | gap 1, opp_overlap 969502 969500 969499 969506, overlap 969540 ACCGAGAATCAGAAA CCGGGCGCCGTTGGCGCAT AAATG GTGCGCTC-TGGCGTCCGG TTTCTGGCGCTGTTC Rcas_0741 969969 - 969580 - | hypothetical protein TERM 732 969804 - 969816 + g 72 -7.7 -4.15044 | TCTGGGCGAGTTCAC CTCGT TCG ACGAG TTTCTTGACGAACGC Rcas_0742 970254 - 971198 + | hypothetical protein TERM 733 971292 - 971240 - T 100 -21.2 -3.32963 | opp_overlap 971255 971285, overlap 971226 971272 ACGCGCAGCGCAGAA GGGGCGGGTCTCTGACCCGCCCCC AGCGA AAAGGCGGGTCTCTGACCCGCCCC CAGCGAAAAGGCGGG TERM 734 971290 - 971272 - T 100 -16 -4.18018 | opp_overlap 971255 971285, overlap 971226 971240 CGCCCCCAGCGAAAA GGCGGGTC TCT GACCCGCC CCCAGCGAAAAGGCG TERM 735 971320 - 971302 - T 89 -11.6 -4.18018 | opp_overlap 971285 971315 CGCCCCCAGCGAAAA GGCGGGTC TCT GCCCCGCC CCCAGCGAAAAGGCG TERM 736 971350 - 971332 - T 89 -11.6 -4.18018 | opp_overlap 971315 971345 CGCCCCCAGCGAAAA GGCGGGTC TCT GCCCCGCC CCCAGCGAAAAGGCG TERM 737 971380 - 971362 - T 89 -11.6 -4.18018 | opp_overlap 971345 971375 CGCCCCCAGCGAAAA GGCGGGTC TCT GCCCCGCC CCCAGCGAAGAGGCG TERM 738 971412 - 971390 - T 72 -12.6 -3.05384 | opp_overlap 971375 971405, overlap 971392 CCCGCCCCCAGCGAA GAGGCGGGTC TCT GCCCCGCCCC CAGCGAAGAGGCGGG TERM 739 971442 - 971420 - T 72 -12.6 -3.05384 | opp_overlap 971405 971435, overlap 971422 CCCGCCCCCAGCGAA GAGGCGGGTC TCT GCCCCGCCCC CAGCGGAGAGGCGGG TERM 740 971502 - 971480 - T 72 -12.6 -3.05384 | opp_overlap 971465 971495, overlap 971482 CCCGCCCCCAGCGAA GAGGCGGGTC TCT GCCCCGCCCC CAGCGAAGAGGCGGG TERM 741 971562 - 971510 - T 87 -16.8 -3.05384 | opp_overlap 971495 971525, overlap 971512 CCCGCCCCCAGCGAA GAGGCGGGTCTCTGCCCCGCCCCC AGCGG AGAGGCGGGTCTCTGACCCGCCCC CAGCGAAGAGGCGGG TERM 742 971560 - 971512 - T 83 -15.8 -3.08679 | opp_overlap 971495 971525, overlap 971510 CGCCCCCAGCGAAGA GGCGGGTCTCTGCCCCGCCCCC AGCGG AGAGGCGGGTCTCTGACCCGCC CCCAGCGAAGAGGCG TERM 743 971622 - 971570 - T 87 -16.8 -3.05384 | opp_overlap 971525 971585 971615, overlap 971572 971600 971602 CCCGCCCCCAGCGAA GAGGCGGGTCTCTGCCCCGCCCCC AGCGA AGAGGCGGGTCTCTGACCCGCCCC CAGCGAAGAGGCGGG TERM 744 971620 - 971572 - T 83 -15.8 -3.08679 | opp_overlap 971525 971585 971615, overlap 971570 971600 971602 CGCCCCCAGCGAAGA GGCGGGTCTCTGCCCCGCCCCC AGCGA AGAGGCGGGTCTCTGACCCGCC CCCAGCGAAGAGGCG TERM 745 971622 - 971600 - T 87 -17 -3.05384 | opp_overlap 971585 971615, overlap 971572 971570 971602 CCCGCCCCCAGCGAA GAGGCGGGTC TCT GACCCGCCCC CAGCGAAGAGGCGGG TERM 746 971620 - 971602 - T 83 -16 -3.08679 | opp_overlap 971585 971615, overlap 971572 971570 971600 CGCCCCCAGCGAAGA GGCGGGTC TCT GACCCGCC CCCAGCGAAGAGGCG TERM 747 971652 - 971630 - T 72 -12.6 -3.05384 | opp_overlap 971615, overlap 971632 CCCGCCCCCAGCGAA GAGGCGGGTC TCT GCCCCGCCCC GCCCCCCGGGCGCAG Rcas_0743 973763 - 971721 - | diguanylate cyclase TERM 748 974244 - 974262 + G 78 -11.6 -3.73336 | GATCAGCGCCATTCT GGCGGCGC TTG GCGGCGCC TTGTTCGATTCGCCT TERM 749 974420 - 974438 + G 72 -2.3 -4.73297 | ATTTTGCCTTTGTTG CGCTTGC GGCTG GCGGGTG TTTCTTTGTTGCTTC TERM 750 974927 - 974950 + G 70 -12.4 -3.14564 | overlap 974939 TCGGATCGTACTTCG GCGTCAGTGC GCTG GCGCTGGCGC TTGGTGGCGGCATCG Rcas_0744 973900 - 975126 + | major facilitator transporter Rcas_0745 975309 - 976703 + | hypothetical protein Rcas_0746 976856 - 977632 + | SH3 type 3 domain-containing protein Rcas_0747 978550 - 977798 - | xylose isomerase domain-containing protein TERM 751 978047 - 978029 - G 73 -13.1 -3.14683 | ATAGCGGCGCAGGAA CGGCGCC GCCTG GGCGCCG CCGTGGAGCGCATTA Rcas_0748 979585 - 978620 - | hypothetical protein Rcas_0749 979788 - 980921 + | DNA polymerase III, beta subunit Rcas_0750 980928 - 981272 + | hypothetical protein TERM 752 981702 - 981716 + G 91 -9.2 -4.66953 | overlap 981714 TTCCTGTCAGTGTCT GCGCTG CAA CGGCGC TTTTTGGCGTCTTCG TERM 753 981732 - 981756 + G 78 -2.8 -5.08255 | TTTTTGGCGTCTTCG GGTTGTATCG CGGAA CGATGGAGCC TTTTCTTTTCGCGCT Rcas_0751 981311 - 982459 + | hypothetical protein TERM 754 983153 - 983170 + F 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 755 983434 - 983392 - f 100 -19.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGA CGCGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT TERM 756 983530 - 983547 + F 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 757 983809 - 983767 - f 100 -19.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGA CGCGCACGACCCCTCGC-GCG GCGCGGAGTGACCAT TERM 758 984869 - 984898 + G 79 -8.6 -4.3534 | GACGACTCTGCCACC GTGGC-GGCAGCGC CACA GC-CTGCCCGCCGC TTTTCGTGGTTCGAC TERM 759 985043 - 985072 + G 79 -8.6 -4.3534 | GACGACTCTGCCACC GTGGC-GGCAGCGC CACA GC-CTGCCCGCCGC TTTTCGTGGTTCGAC Rcas_0752 984305 - 986209 + | TPR repeat-containing protein Rcas_0753 988295 - 986316 - | membrane protein-like protein TERM 760 987270 - 987306 + g 74 -14.4 -2.58544 | overlap 987269 CGGCTCGCCAGGGAG CGATGGCGTCGTGCGT TGCAT GCGCGCTGCGCCATCG ATTGTCGCCATCACA Rcas_0754 989406 - 988285 - | hypothetical protein TERM 761 989179 - 989168 - G 70 -7.2 -4.08945 | ATCATGGTCGCAAAA GGCG GATG CGCC GTCTGATAAGCGCCG Rcas_0755 990370 - 989393 - | integral membrane protein-like protein Rcas_0756 991071 - 990367 - | methyltransferase type 11 Rcas_0757 992150 - 991074 - | glycosyl transferase family protein TERM 762 991305 - 991288 - G 85 -9.8 -4.36063 | overlap 991280 991290 991299 ACAACATCACGAAAA GCGCGC CAATAT GCGCGC CGCCATCCCTTGCGC Rcas_0758 993252 - 992137 - | glycosyl transferase group 1 TERM 763 992260 - 992210 - G 72 -7.6 -4.18018 | gap 2, opp_overlap 992220, overlap 992211 TTGTCCCAGGCAAAA TGGGCGATCCGCGCGCGCGCCC GCGCGCTTA GGTCG-GCGCGCAGATCGTC-A TCGTTCATCAGTCGC TERM 764 992220 - 992237 + g 75 -14.1 -3.05384 | opp_overlap 992210 992211 CAAAATGGGCGATCC GCGCGCG CGCC CGCGCGC TTAGGTCGGCGCGCA Rcas_0759 994319 - 993240 - | hypothetical protein Rcas_0760 995347 - 994316 - | glycosyl transferase family protein TERM 765 995376 - 995394 + r 93 -14.6 -3.84719 | opp_overlap 995369 TCTCATAACGTCTGA GGCGTTGC ACC GCAACGCC TTTACGTTTCCGCCT Rcas_0761 996834 - 995596 - | hypothetical protein TERM 766 996228 - 996186 - G 71 -11.3 -3.49102 | AGAGTTCCCAGAGAA GCGGCGC-CACCACCACCACC CCC GGTTGCT-TGGTGAGCGCCGC TGCGCCGCCGGCCGC TERM 767 996360 - 996341 - G 85 -5.6 -5.05505 | AGCAGAAACGAAAAA CCGAGCGG ACTA CCGATCAG GAACAGCGTTGTGCG TERM 768 997096 - 997061 - R 80 -11 -3.73775 | gap 1 GTCACCCCGAGCAAA GCGAGGGGTCTGGCGCG TCC CGCGCC-GATTCCGCGC TGCGCTCGGCATGAC Rcas_0762 998033 - 997620 - | hypothetical protein Rcas_0763 998421 - 997990 - | DNA polymerase beta subunit TERM 769 998555 - 998609 + r 89 -12.6 -4.07885 | opp_overlap 998576 ACGCTGCGGGCTGAA GCCCTCGCTGAGGTCACGAAAGCCCC TCT GGGGCTTCCACGTACTGAGCGCGGGC TTTTGCCAGCGGCTC TERM 770 998588 - 998576 - R 76 -10.5 -3.74693 | opp_overlap 998555 GCTGAGGTCACGAAA GCCCC TCT GGGGC TTCCACGTACTGAGC Rcas_0764 1000901 - 998910 - | asparagine synthase (glutamine-hydrolyzing) TERM 771 1003370 - 1003332 - R 82 -9.5 -4.30014 | gap 1, opp_overlap 1003339, overlap 1003311 TGGATCAACGGAAAA CCAGCGCA-CGCTGTCGG CGTT CCGCCAGCGCTTCGGTGG CGCGCCATACCCCAG Rcas_0766 1004871 - 1003600 - | hypothetical protein Rcas_0767 1005826 - 1004900 - | hypothetical protein Rcas_0768 1006498 - 1005830 - | methyltransferase type 12 TERM 772 1006220 - 1006207 - G 91 -3.1 -5.49569 | gap 1, overlap 1006209 1006211 GATTAACATAAAAAA CAGCTG CAT CAGC-G CATATCAAGTTGACA TERM 773 1006219 - 1006209 - G 73 -6.8 -4.36863 | overlap 1006207 1006211 TTAACATAAAAAACA GCTG CAT CAGC GCATATCAAGTTGAC Rcas_0769 1007934 - 1006495 - | hypothetical protein TERM 774 1008540 - 1008550 + G 71 -8.2 -3.88291 | GGGCCCAGCGTGTTT GGGC CTT GCCC TTTCTGACCGTCCTG Rcas_0770 1008089 - 1009447 + | hypothetical protein TERM 775 1009784 - 1009812 + T 71 -5.9 -4.42806 | CGCTCCAAGCTGAAG CGCGGCTGC TGGTGGGGGTT GCTGCCGCG TTTGTTTCCGCCTAA Rcas_0772 1011912 - 1010446 - | polysaccharide biosynthesis protein TERM 776 1010813 - 1010826 + g 72 -2.3 -4.73912 | opp_overlap 1010808, overlap 1010817 AAGGATGAAACAACA GTGGC AAAG GCGAC TTTTGTGGTTTTTCT Rcas_0774 1013457 - 1012393 - | N-acylneuraminate-9-phosphate synthase Rcas_0775 1014962 - 1013454 - | GCN5-related N-acetyltransferase Rcas_0776 1016000 - 1015362 - | acylneuraminate cytidylyltransferase TERM 777 1015889 - 1015876 - G 74 -2.3 -4.84761 | opp_overlap 1015876, overlap 1015865 ATACTTCCACAAAAA CAAGG CCAA CCATG TTTTTTGCAAAGTTC TERM 778 1015876 - 1015889 + g 77 -2.3 -5.03145 | opp_overlap 1015865 1015876 ATACTTCCACAAAAA CAAGG CCAA CCATG TTTTTTGCAAAGTTC TERM 779 1016227 - 1016214 - R 77 -3.1 -5.0133 | TAGTGCTTCAAAAAA TTGCG TTTC CACAA TAGATTTTCATGAGC Rcas_0777 1017889 - 1016687 - | DegT/DnrJ/EryC1/StrS aminotransferase Rcas_0778 1018863 - 1017886 - | polysaccharide biosynthesis protein CapD Rcas_0779 1019974 - 1019225 - | hypothetical protein Rcas_0781 1023373 - 1022096 - | glutamine--scyllo-inositol transaminase TERM 780 1023603 - 1023561 - R 100 -20.7 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GCG GCTCGAGGTGACCAT Rcas_0782 1024056 - 1023628 - | S23 ribosomal protein Rcas_0783 1024990 - 1024352 - | hexapaptide repeat-containing transferase TERM 781 1025300 - 1025355 + r 81 -13.2 -3.32963 | gap 1 CCCCCCTTTTTCAAG CGCTGCCACGCACCGTTCGGCGGCG TGACCAT CGCCGTAGAGCGGCGGGTG-CGGCG TTGTCGGATAGGGCT Rcas_0784 1026346 - 1025276 - | UDP-N-acetylglucosamine 2-epimerase TERM 782 1026611 - 1026554 - R 76 -14.7 -2.65354 | gap 1, overlap 1026550 1026562 1026563 CTCAGGGTAAACGCA GCGAGGAATCTGACCGCGCGCAGCGCGG AAT CGGCGCGGGACGCGCCC-GACCCCTCGC GCGGCTCGGGGTGAC TERM 783 1026792 - 1026739 - R 89 -17.3 -3.21199 | gap 1, opp_overlap 1026748, overlap 1026722 1026726 CAGCGAGGAATCTAA CCGCGCGCAGCGCGGAATCG-GCGCG GGA CGCGCACGACCCCTCGCTTTGCTCGG GGTGAGAATGCCGGA TERM 784 1026748 - 1026783 + r 80 -11 -3.73775 | gap 1, opp_overlap 1026726 1026739 ATCTAACCGCGCGCA GCGCGGAATCG-GCGCG GGA CGCGCACGACCCCTCGC TTTGCTCGGGGTGAG TERM 785 1026955 - 1026898 - R 78 -15.5 -2.65354 | gap 1, overlap 1026894 1026906 1026907 1026911 CTCAGGGTAAACGCA GCGAGGAATCTAACCGCGCGCAGCGCGG AAT CGGCGCGGGACGCG-CCAGACCCCTCGC GCGGCTCGGGGTGAG TERM 786 1026964 - 1026911 - R 85 -16 -3.21199 | gap 3, overlap 1026894 1026906 1026898 1026907 CAGCGAGGAATCTAA CCGCG-CGCAGCGCGGAATC-GGCGCG GGA CGCGCCAGACCCCTCGC-GCGGCTCGG GGTGAGAATGCCGGA Rcas_0785 1028283 - 1027246 - | oxidoreductase domain-containing protein Rcas_0786 1029250 - 1028330 - | hypothetical protein Rcas_0787 1030881 - 1029313 - | hypothetical protein TERM 787 1030235 - 1030203 - G 71 -6.1 -4.26019 | overlap 1030205 CAACGAGAGTGAAAA GAGCGGCAATGCGCC ATC GGCGCATCAGCGCGG CGACTAGCGCGGACA TERM 788 1030233 - 1030205 - G 81 -13.1 -3.72315 | overlap 1030203 ACGAGAGTGAAAAGA GCGGCAATGCGCC ATC GGCGCATCAGCGC GGCGACTAGCGCGGA Rcas_0788 1032348 - 1030954 - | hypothetical protein Rcas_0789 1033239 - 1032445 - | methyltransferase type 11 TERM 789 1032968 - 1032993 + g 70 -10.4 -3.56643 | CGCTTGGCGTAGAGC GCGCGCGC AACCGCATAG GCGCGCGC TTTCCACGATGTGAC Rcas_0790 1034534 - 1033242 - | glycosyltransferase-like protein TERM 790 1033690 - 1033675 - G 74 -5.4 -4.63486 | AGGTTTCCAATAAAA CAAACC TCGA GGTCTG CCAGGACAGACGACC Rcas_0791 1035559 - 1034531 - | glycosyl transferase family protein Rcas_0792 1036658 - 1035528 - | glycosyl transferase family protein TERM 791 1036127 - 1036111 - GR 100 -2.1 -5.76633 | overlap 1036112 1036113 TGATAGACAAAAAAA TCCGGGT CGC ACCCGCC GATTGCCAGAAACTT Rcas_0793 1038574 - 1036655 - | asparagine synthase (glutamine-hydrolyzing) Rcas_0794 1039636 - 1038578 - | hypothetical protein TERM 792 1039135 - 1039120 - G 71 -6.1 -4.2828 | GTTTAGCTAGCAAAA CCGGT GCAAAA ACCGG TAGGAATAGTGCAAG Rcas_0795 1040505 - 1039642 - | hypothetical protein TERM 793 1039814 - 1039852 + g 78 -14.4 -3.01791 | GCACGCTGTTGTTCG GCTTCGGCGCGCTGGCGC TCG GCTTCGGCGCGCTGGCGC TCTTGCGCCGCCAGT Rcas_0796 1041531 - 1040746 - | hypothetical protein TERM 794 1040775 - 1040830 + g 80 -14.7 -3.14229 | gap 3, overlap 1040802 CGGGGTCGATCCCCA GCGCG-CGCAACCGCGCTGCCAGT-CGC TCG GCGCGCTGGC-GCTCGGCTTCGGCGCGC TGTTGCTCCGCCTCT TERM 795 1040802 - 1040832 + g 80 -14.6 -3.16191 | overlap 1040775 GCGCTGCCAGTCGCT CGGCGCGCTGGCGC TCG GCTTCGGCGCGCTG TTGCTCCGCCTCTGC TERM 796 1041589 - 1041606 + r 76 -9.1 -4.08064 | overlap 1041583 1041581 1041596 1041597 CGTTCGCCGCGCTGA CGGCACG TTGG CGTGCTG TTTTGGACGCCAGTT Rcas_0797 1042485 - 1041721 - | hypothetical protein Rcas_0798 1043701 - 1042511 - | glycosyl transferase group 1 TERM 797 1042543 - 1042560 + g 76 -9.1 -4.08064 | overlap 1042537 1042535 1042550 1042551 CGTTCGCCGCGCTGA CGGCACG TTGG CGTGCTG TTTTGGACGCCAGTT Rcas_0799 1044650 - 1043679 - | hypothetical protein TERM 798 1044202 - 1044192 - G 74 -4.6 -4.57073 | CAGCGCCGGGAAAAA CCAC GCT GCGG CAATGAGCGGTGACC TERM 799 1044478 - 1044455 - G 76 -5.9 -4.57073 | CACGCCCCTGAAAAA GGGCGGTCG CCGTAT CAAGCGCCC AGTTGAAATCGCCCG Rcas_0800 1046134 - 1045034 - | glycosyl transferase family protein Rcas_0801 1047542 - 1046376 - | glycosyl transferase group 1 Rcas_0802 1047975 - 1048622 + | 4-vinyl reductase 4VR TERM 800 1048696 - 1048744 + F 100 -11.2 -5.63517 | gap 2, opp_overlap 1048698 ACCTTCCGATGCATA CACACGTT-CGACT-GCCGGAT TCCGTCC GTCCGGCTGGTCGCAGCGTGTG TTTTTTGTTTCAAGG Rcas_0803 1048926 - 1050326 + | N-acetylglucosamine-1-phosphate uridyltransferase-like protein Rcas_0804 1050338 - 1051282 + | response regulator receiver modulated diguanylate cyclase TERM 801 1052431 - 1052407 - g 100 -19.3 -3.90744 | opp_overlap 1052421 TTTGCGCTGAAAGAA GCGCTGCGCGC CAC GCGCGCAACGC AGGGGTATGTGGCGT Rcas_0805 1051336 - 1057821 + | multi-sensor signal transduction histidine kinase TERM 802 1058004 - 1058015 + G 76 -7.2 -4.30014 | GGCGAGTCGGATCGA CGCG ATGG CGCG TTTTCAATTGCTGAG TERM 803 1058458 - 1058442 - g 78 -6.5 -4.56597 | opp_overlap 1058422 1058444 GTTTTTGGCGAAAAA GACGCCA TTG TGTCGTC TGATCAGGCGCGCTT Rcas_0806 1057818 - 1058657 + | alpha/beta hydrolase fold Rcas_0807 1058852 - 1059892 + | alcohol dehydrogenase TERM 804 1059949 - 1059977 + F 74 -3.8 -4.84761 | gap 1, opp_overlap 1059949 1059952, overlap 1059950 1059952 ACAATTGTGAGACAA C-CAGGGGCGCAT CACT GTGCGTCCCTATG TTTTTGTCGGAATAT TERM 805 1059952 - 1059973 + F 73 -10.1 -3.61001 | opp_overlap 1059952 1059949, overlap 1059950 1059949 ATTGTGAGACAACCA GGGGCGCAT CACT GTGCGTCCC TATGTTTTTGTCGGA TERM 806 1060317 - 1060301 - f 84 -3.7 -5.28826 | AAAGGCGAGAAAAAA TTGGATG GTG CATTCAA AGCATATAACGCATT TERM 807 1060575 - 1060536 - f 73 -14.2 -2.71144 | opp_overlap 1060541 TACTGCCGGCAAGCA GTGCAGACGGGGCAGGCA GCGT CGCCTGCCCCGTCTTCGT TGGCGCTGTGACCCT TERM 808 1060541 - 1060570 + F 100 -20.8 -3.35371 | opp_overlap 1060536 CCGGCAAGCAGTGCA GACGGGGCAGGC AGCGTC GCCTGCCCCGTC TTCGTTGGCGCTGTG Rcas_0808 1061057 - 1061605 + | methyltransferase type 11 TERM 809 1062807 - 1062795 - g 72 -2.6 -4.70659 | GCTGAGATCGAAAAA GACG AGCCG CGCC TTGGTGTTGCGACGC Rcas_0809 1061940 - 1064123 + | hypothetical protein TERM 810 1064280 - 1064261 - f 100 -11.4 -5.26875 | TCGCCAACCAAAAAA CGGCCGCT CATG AGCGACCG TGAAAGAGGAGGTAT Rcas_0810 1064666 - 1065415 + | hypothetical protein Rcas_0811 1065450 - 1066862 + | iron-sulfur cluster binding protein TERM 811 1067499 - 1067514 + G 100 -3.9 -5.71712 | opp_overlap 1067490, overlap 1067483 CAACGACTCCCTTCA GGGCG CTCGAT TGCCC TTTTTTTCTATGACG Rcas_0812 1066866 - 1069301 + | glycoside hydrolase family protein Rcas_0813 1069540 - 1070145 + | hypothetical protein Rcas_0814 1071476 - 1070673 - | UbiA prenyltransferase Rcas_0815 1071968 - 1071492 - | hypothetical protein TERM 812 1071615 - 1071591 - G 70 -7.7 -4.03888 | overlap 1071592 1071595 GACCGAGAACAACAA TGCAGCGCGCC GGT GGCGATCCGCA TCCTGGCGCCCCCTG TERM 813 1071721 - 1071705 - G 84 -2.1 -5.37345 | TTCAACGACAAAAAA GCGGAGC GAC GGTTCGC GCATTACCACATTCA Rcas_0816 1072293 - 1071973 - | cupin 2 domain-containing protein Rcas_0817 1073138 - 1072290 - | methyltransferase type 11 Rcas_0818 1073565 - 1073323 - | hypothetical protein Rcas_0819 1073808 - 1073578 - | hypothetical protein Rcas_0820 1076167 - 1073819 - | iron permease FTR1 TERM 814 1075301 - 1075331 + g 71 -13.3 -3.01924 | opp_overlap 1075294 1075304, overlap 1075304 CGGCACAAGGTGCAG GAAGCGCAGCATC TGACC GGTGCGGCGCTTC TGTTCCGCCGGGCTA Rcas_0821 1077263 - 1076181 - | hypothetical protein Rcas_0822 1077504 - 1078754 + | kynureninase Rcas_0823 1080055 - 1078835 - | cystathionine gamma-synthase TERM 815 1079064 - 1079048 - G 84 -13.7 -3.69283 | opp_overlap 1079046 1079045 CAACGTATCGAAGAA GCGCGAC AGC GTCGCGC GCGTTGCTTCCCGCA Rcas_0824 1080377 - 1081684 + | hypothetical protein TERM 816 1081859 - 1081901 + T 73 -9.9 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCTTA-GATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_0825 1084540 - 1083158 - | phosphotransferase domain-containing protein TERM 817 1083485 - 1083498 + g 71 -8.1 -3.92625 | opp_overlap 1083483 GCCGTGCGCAATAGC GCGCA AAAT TGCGC TTTCATTACGATGTG TERM 818 1085195 - 1085158 - g 74 -11.9 -3.5032 | gap 1, overlap 1085156 CCGGTACATGAAATA CCCACCCGAAGGCGTGCG GGG CGCA-GCCGCCGGGCGCG GGCACACCGACTATC Rcas_0826 1084820 - 1085623 + | HpcH/HpaI aldolase TERM 819 1086011 - 1086027 + G 75 -12.3 -3.64703 | GTGCAGAAATAGCTG CGCAGGT GTT ACCTGCG TTTGGCTACACACCC Rcas_0827 1085707 - 1086393 + | metal dependent phosphohydrolase Rcas_0828 1087326 - 1086412 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 820 1087343 - 1087308 - G 75 -14 -3.08798 | gap 1, opp_overlap 1087313, overlap 1087311 AGGCGGGACGCAAGA GCAGAGGGCGCAGTGCC ACA GGCG-TGCGCCCTCTCC TGACCAACGCAGCGA TERM 821 1087340 - 1087311 - G 75 -14.3 -2.75992 | gap 1, opp_overlap 1087313, overlap 1087308 CGGGACGCAAGAGCA GAGGGCGCAGTGCC ACA GGCG-TGCGCCCTC TCCTGACCAACGCAG Rcas_0829 1088735 - 1087455 - | major facilitator transporter TERM 822 1088475 - 1088465 - G 71 -8.2 -3.86684 | overlap 1088466 ACAACGTATACGAAA GGGC GCT GCCC ACCAGACTGAGGAGC TERM 823 1089413 - 1089392 - R 100 -15.9 -5.75342 | opp_overlap 1089396 TCTCGGCAAAAAAAA CACAGCCCC CTTG GGGGCTGTG TCAAACAGCACAAAC TERM 824 1089621 - 1089610 - R 75 -2.2 -4.9792 | CAGTTCATAGAAAAA CCTC CATT GAGA TCACCGCCACTCCTG Rcas_0830 1090434 - 1089724 - | hypothetical protein Rcas_0831 1091092 - 1090658 - | hypothetical protein Rcas_0832 1092477 - 1091275 - | hypothetical protein Rcas_0833 1094765 - 1092597 - | multi-sensor signal transduction histidine kinase TERM 825 1094165 - 1094179 + g 71 -12.8 -3.0634 | GCTCGAGTTCTTCGA CGCGCG CTT CGCGCG TGTTCCGCTCGCGTT Rcas_0834 1095498 - 1094818 - | two component transcriptional regulator TERM 826 1095539 - 1095565 + H 70 -10.2 -3.52459 | opp_overlap 1095530 CACAAACCCTGGGGA GAGGGGAGAC AACCGCG GTCTTCCCTC TTGTGTGCGCTTGGT Rcas_0835 1095928 - 1096521 + | hypothetical protein Rcas_0836 1096508 - 1097116 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 827 1097188 - 1097159 - g 80 -14.9 -3.1211 | opp_overlap 1097167, overlap 1097154 GAGGAGATCATCGAA CTGGCGCGCCGCG AGAT CGCCGCGCGCAAG GAACGGGAGCGCAGC Rcas_0837 1097129 - 1097986 + | hypothetical protein Rcas_0838 1098428 - 1097988 - | BadM/Rrf2 family transcriptional regulator TERM 828 1098818 - 1098778 - g 74 -6.2 -4.4009 | opp_overlap 1098778 1098784, overlap 1098784 GTCCATTCTAGAAAA GATAAAGGATGAGCAAAG GCGAA CGTTGCCCATTCTTGATC TTCTGGCACATATGC Rcas_0839 1098653 - 1099795 + | HNH endonuclease TERM 829 1100541 - 1100553 + G 71 -5.5 -4.32034 | overlap 1100542 ATCGCGTGAAGATGC TGCTC AGC GAGCG TTTTCATCCTGATGG Rcas_0840 1099847 - 1100647 + | histidine triad (HIT) protein Rcas_0841 1102379 - 1101513 - | molybdopterin dehydrogenase FAD-binding TERM 830 1102433 - 1102406 - R 95 -20.6 -2.64794 | opp_overlap 1102399 CTCAATTCTAGATGA GCGCGTCCGACG CTGG CGCCGGACGCGC TGTGACGATTCTCAG Rcas_0842 1104826 - 1102445 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 831 1104369 - 1104385 + g 78 -3.5 -5.0538 | overlap 1104370 TCGTGAAGTTGCGGC GCACCCG GCT CGGTGGC TTTTTTGGCATCCAC TERM 832 1104817 - 1104831 + g 73 -2.8 -4.73092 | TCGTTGGCATCGTTT CAGC CGTCATT GCTG TTTCTTTTCCCTTCT Rcas_0843 1105390 - 1104908 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Rcas_0844 1106189 - 1105440 - | carbon monoxide dehydrogenase subunit G TERM 833 1105915 - 1105945 + g 84 -11.1 -4.11216 | opp_overlap 1105907 1105910 1105913 1105915 GCCACAAGATCAACA GTGCCGACGCCGT CGACC ACGCCGTTGGCGC TTTTCCCACTGGCAA Rcas_0845 1107890 - 1106364 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 834 1108021 - 1108002 - R 100 -15 -4.8048 | TCCGCATACGAAAAA GCCGCGCT ATGG AGCGCGGC CGGCAATGCTAGGGA Rcas_0846 1108471 - 1108052 - | response regulator receiver protein TERM 835 1108151 - 1108165 + g 80 -5.6 -4.70659 | opp_overlap 1108139, overlap 1108153 ATAGTCGTTGGCGCC AAGGCG CAT CGCCTG TTTTTGGGTATCGGG TERM 836 1108153 - 1108163 + g 73 -8.2 -3.96999 | opp_overlap 1108139, overlap 1108151 AGTCGTTGGCGCCAA GGCG CAT CGCC TGTTTTTGGGTATCG TERM 837 1108712 - 1108728 + r 71 -7.9 -4.13767 | GTCCGTGATGCCGTC GGGCGTC CCT GACCCCC TTTTCCCCTCCCAAC TERM 838 1108854 - 1108903 + r 70 -12.1 -2.87931 | gap 1, overlap 1108870 CGCGGGCGACCGGCG CCACGTGCGCGGACGTCCCACGGT GGA AGCGTCGG-TGTTCGCGCGGGTGG TCTGTCCGCCCTGAA Rcas_0847 1109834 - 1108977 - | phosphotransferase domain-containing protein Rcas_0848 1110964 - 1109831 - | patatin Rcas_0849 1113195 - 1111042 - | glycosyltransferase TERM 839 1111109 - 1111068 - G 90 -13.5 -4.08216 | opp_overlap 1111080 TCAGCGTCGTCAAAA GCAGCGCATGCGGCCCGGC GCGC GCCGGGTCGGCTGCGACGC CGCCGCTGACGGGCG TERM 840 1113095 - 1113053 - G 79 -8.2 -4.36914 | overlap 1113055 TCGGTCGTTAGAAAA TCGGCAAGCCCGAACGCGCG CGG CGCGAGCATGAGCGTGCCAA GTATCAGGGCAGTCA Rcas_0850 1113468 - 1113917 + | hypothetical protein TERM 841 1115466 - 1115484 + T 89 -12.4 -4.07568 | GGCGACAGATCGTTG TTGCGCGC ATG GCGCGCGA TTTTCAGCACCACCC Rcas_0852 1115733 - 1115488 - | hypothetical protein Rcas_0853 1116613 - 1115948 - | HAD family hydrolase TERM 842 1116898 - 1116930 + G 100 -12 -4.46212 | opp_overlap 1116902 1116903, overlap 1116891 1116899 AATCCGTGTTGCGCT ACAATCGCGCGATG GTATG CGTCGCGCGGTTGA TTTTCTGATCGCCGG TERM 843 1116899 - 1116929 + G 84 -15.5 -3.27406 | opp_overlap 1116902 1116903, overlap 1116891 1116898 ATCCGTGTTGCGCTA CAATCGCGCGATG GTATG CGTCGCGCGGTTG ATTTTCTGATCGCCG Rcas_0854 1116851 - 1117651 + | methyltransferase type 11 Rcas_0855 1121633 - 1118031 - | chromosome segregation protein SMC TERM 844 1118816 - 1118856 + g 74 -11.8 -3.49102 | gap 2 GCTCCCGCAGGGTTT CCAGGCGATC-CCG-CGCGC GCT GCGCGTCGATGGTCGCCCGG TTATATGCCGACTCT TERM 845 1119188 - 1119137 - G 83 -12 -4.07568 | gap 1, opp_overlap 1119167 1119180, overlap 1119138 CGCCGGTGTGCAAAA CGGCGCGCAGGGCGCGCACCTCGCC CTC GGCATCG-GCGCGGCGCGCGCGCAG GACTGCCAGCGCCTC TERM 846 1121104 - 1121126 + g 73 -12.6 -3.21218 | opp_overlap 1121066 1121065 CCCGTCTCGCGCAGG CGCCGTTCCG CAT CGGTGCGGCG TTGCTCATAGACGCT TERM 847 1122832 - 1122807 - g 74 -13.3 -3.31461 | opp_overlap 1122804 1122792 1122791 1122829 GAGTTACGGGCAGAA CGTACTCCAGC ACTC GCTGGAGTGCG CGCTGCTTGCGGCGC Rcas_0856 1121758 - 1123365 + | RNA binding metal dependent phosphohydrolase Rcas_0857 1123552 - 1123893 + | stage V sporulation protein S TERM 848 1123911 - 1123948 + T 88 -6.9 -4.89339 | gap 1, overlap 1123913 1123915 GGAAGAATTGGCCGG TGG-AGGGCGGTCGCGCG ATA CGAACGACCGCCCTGTTG TTTTTATCAATGGTT TERM 849 1123913 - 1123945 + T 100 -13.3 -4.5448 | overlap 1123911 1123915 AAGAATTGGCCGGTG GAGGGCGGTCGCGCG ATA CGAACGACCGCCCTG TTGTTTTTATCAATG TERM 850 1123915 - 1123943 + T 95 -15.9 -3.86816 | overlap 1123913 1123911 GAATTGGCCGGTGGA GGGCGGTCGCGCG ATA CGAACGACCGCCC TGTTGTTTTTATCAA Rcas_0858 1124915 - 1123980 - | 2-dehydropantoate 2-reductase TERM 851 1124063 - 1124040 - G 73 -8.2 -4.03234 | gap 1, overlap 1124049 TGCGTGGTAGATAAA GGCATGC-AAC GGC GTTGGCACGCC AACCGCTGCTCCCAG Rcas_0859 1125845 - 1125042 - | hypothetical protein TERM 852 1125302 - 1125284 - G 72 -4.4 -4.58395 | TGCAGCGCTGAAAAA CTGTCGGC GCT GGCGTCAG GTTGAAACGGCGCAT Rcas_0860 1126582 - 1125842 - | prolipoprotein diacylglyceryl transferase Rcas_0861 1127153 - 1126584 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 853 1127224 - 1127241 + H 78 -2.6 -5.1287 | opp_overlap 1127226, overlap 1127226 CAATACCACGAAGGA GAGCGT CATGAT ACGCAC TTTTTTGCATGTCCG Rcas_0862 1127250 - 1127948 + | cytidylate kinase Rcas_0863 1127945 - 1129609 + | hypothetical protein TERM 854 1130401 - 1130440 + G 80 -14.2 -3.14564 | GCGACCGGACCTGTG CTGGCGGTGCGTCCGCGT TCGG GTGCGGAAGCGCTGCCGG TTGATGCGCCGCTGA Rcas_0864 1129630 - 1131519 + | hypothetical protein Rcas_0865 1131530 - 1133560 + | hypoxanthine phosphoribosyltransferase TERM 855 1134021 - 1134031 + G 74 -2.4 -4.89852 | CCTGCACCAGGAACT GGCC GGC GGCA TTTTTGTCGATGTCA Rcas_0866 1133584 - 1134999 + | tyrosine phenol-lyase TERM 856 1136224 - 1136192 - g 71 -12.8 -3.07994 | gap 1 TGCAACGTGATCGAA CTGCGC-GGTCTGGA AGGC TCCACACCGGCGCAG GAACGCGGCGATGGC Rcas_0867 1135682 - 1136674 + | periplasmic binding protein/LacI transcriptional regulator TERM 857 1137742 - 1137719 - g 76 -11 -3.72576 | gap 1, overlap 1137705 1137704 TTCTTGCGCAGCAAA CGGCGCT-CGC TGC GCGCAACGCCG AACTCGAACAAAGTT Rcas_0868 1136677 - 1138197 + | anti-sigma-factor antagonist TERM 858 1138478 - 1138455 - T 95 -12.4 -4.15703 | GGGGACAAACAAGAA GCGGCTGAGA CGAA CCCCAGCCGC CAGATGGATACTGAG Rcas_0869 1139072 - 1138506 - | hypothetical protein TERM 859 1139246 - 1139261 + r 84 -11.8 -4.08111 | opp_overlap 1139235 1139237 ATGAGAGGAGCGTTC CCCGCC GTTC GGCGGG TTTGTGGTGTGTTTC TERM 860 1139583 - 1139565 - R 81 -8.1 -4.58395 | gap 1, overlap 1139567 CTCATCCCTGAAAAA CACCCCGC TCAA GCGGGG-G AGTCGCTGCCATGTC TERM 861 1139582 - 1139567 - R 82 -11.8 -3.90762 | overlap 1139565 CATCCCTGAAAAACA CCCCGC TCAA GCGGGG GAGTCGCTGCCATGT TERM 862 1139694 - 1139659 - R 80 -14.8 -3.1247 | gap 1 ATGTGCGACATTCAA CATGGCAGCGACATCGC ATT GCCACGTCGCTGCC-TG CCACCTCTTACCGCT Rcas_0870 1140277 - 1139717 - | hypothetical protein Rcas_0871 1140771 - 1141523 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Rcas_0872 1141723 - 1142037 + | DNA polymerase beta subunit Rcas_0873 1142098 - 1143324 + | hypothetical protein Rcas_0874 1143339 - 1143767 + | hypothetical protein Rcas_0875 1143785 - 1144630 + | DNA methylase N-4/N-6 domain-containing protein Rcas_0876 1144775 - 1145332 + | hypothetical protein TERM 863 1145635 - 1145673 + G 70 -11.7 -3.21099 | gap 1, overlap 1145621 CGCGCCTGGTACGAC CGCACCCTGCGC-TTGCT CGGC AGCGATGCGCAGGTGGCG TTCGTCGTCGAGCCG Rcas_0877 1145341 - 1147497 + | DNA ligase, NAD-dependent TERM 864 1148154 - 1148177 + G 71 -8.8 -3.91897 | overlap 1148155 GGCATGACGAACCTC TTTGCGCGCC CGGT GGTGCGCGAG TTTATCAATGCCACC Rcas_0878 1147512 - 1148465 + | alpha/beta hydrolase fold TERM 865 1148525 - 1148574 + T 95 -15.7 -3.93583 | opp_overlap 1148534, overlap 1148526 ACGAAGGGCGCGCAG AGGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCCC TTTGTGGATAGGTTG TERM 866 1148526 - 1148573 + T 88 -19.2 -2.95668 | opp_overlap 1148534, overlap 1148525 CGAAGGGCGCGCAGA GGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCC CTTTGTGGATAGGTT TERM 867 1148637 - 1148686 + T 95 -15.7 -3.93583 | opp_overlap 1148646, overlap 1148638 ACGAAGGGCGCGCAG AGGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCCC TTTGTGGATAGGTTG TERM 868 1148638 - 1148685 + T 88 -19.2 -2.95668 | opp_overlap 1148646, overlap 1148637 CGAAGGGCGCGCAGA GGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCC CTTTGTGGATAGGTT TERM 869 1149519 - 1149568 + T 95 -15.7 -3.93583 | opp_overlap 1149528, overlap 1149520 ACGAAGGGCGCGCAG AGGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCCC TTTGTGGATAGGTTG TERM 870 1149520 - 1149567 + T 88 -19.2 -2.95668 | opp_overlap 1149528, overlap 1149519 CGAAGGGCGCGCAGA GGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCGCTTCGTGCC CTTTGTGGATAGGTT TERM 871 1149743 - 1149792 + T 78 -9.9 -3.96932 | opp_overlap 1149734, overlap 1149744 ACGAAGGGCGCGCAG AGGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCTCTTCGTGCCC TTTGTGGATCTGTCT TERM 872 1149744 - 1149791 + T 75 -13.4 -2.97436 | opp_overlap 1149734, overlap 1149743 CGAAGGGCGCGCAGA GGCACGAAGCGGAAGGAAGGGA AAAA TCTCTTCGCGCCTCTTCGTGCC CTTTGTGGATCTGTC Rcas_0879 1150290 - 1149889 - | hypothetical protein Rcas_0880 1152154 - 1151267 - | LysR family transcriptional regulator TERM 873 1152214 - 1152196 - H 73 -9 -3.97947 | TGCATGTATTATAAA TCATTGAT CCT ATCAATGA AGCAATTCTGTTATA TERM 874 1155020 - 1155051 + G 72 -7.2 -4.14472 | gap 1 GCAAAGGGAACGTTC CTGCTCGGCGTGCGC GCT GTGATCGCCGAG-AG TTTTGAGCGTATTCA Rcas_0881 1152602 - 1155358 + | aconitate hydratase TERM 875 1155390 - 1155423 + F 74 -11.7 -3.42013 | opp_overlap 1155383 1155390, overlap 1155384 ACTGAGAACCGAAAA CCGGACGTGCGCC GTGGTGTG GGTGTGCGTCCGG TTCCTGTTCTGACAT Rcas_0882 1155503 - 1155973 + | DNA polymerase beta subunit Rcas_0883 1155994 - 1156287 + | hypothetical protein Rcas_0884 1157501 - 1156617 - | DNA adenine methylase TERM 876 1156826 - 1156784 - G 78 -9.9 -4.10164 | gap 1 TGAGCATGACATAAA CGCCGCGCTCACTGAGTTCT GCAA AGACCTCAGCCAG-GCGACG CTGATCCTCGGGACC TERM 877 1157136 - 1157112 - G 83 -15.7 -3.14132 | opp_overlap 1157112 GGTGCGGTTGAGGAA GATCGTGCGCG CGG CGCGCTCGATC TTGCTGCGCTGTGCA TERM 878 1157112 - 1157136 + g 83 -15.7 -3.17763 | opp_overlap 1157112 GGTGCGGTTGAGGAA GATCGTGCGCG CGG CGCGCTCGATC TTGCTGCGCTGTGCA TERM 879 1157360 - 1157349 - G 84 -2.2 -5.24989 | gap 1, overlap 1157351 1157352 GTAGAGATGAAAAAA GAGCG CGC CGC-C ACCGACGAACGGTTC Rcas_0885 1157827 - 1159149 + | asparaginyl-tRNA synthetase TERM 880 1160529 - 1160511 - g 72 -7.4 -4.18018 | CGTCGCCATTCAAAA CGCCCAAT TGC ATCAGGCG CGCGAGAAGGCGCTG TERM 881 1161520 - 1161552 + G 76 -14.1 -3.14132 | TTTGCCAATCTGAGT CAGCGCGCGCCGC ACCTGAC GCGCCGCGTGCTG TTCGTCAGCGGCGAC Rcas_0886 1159159 - 1161687 + | GAF sensor hybrid histidine kinase Rcas_0887 1162121 - 1161693 - | hypothetical protein TERM 882 1161891 - 1161873 - G 71 -5.2 -4.47707 | overlap 1161878 1161880 GCCCAGGAAAAAGAA GATCAGAG CGG CGCCGATC ATAGTGTTCATGAGC Rcas_0888 1163696 - 1162635 - | beta-lactamase TERM 883 1163122 - 1163083 - G 79 -13.5 -3.40403 | gap 1, opp_overlap 1163098 GGCGTTGCACGATAA CGTCCACGCACATCGGCG ATGCG CGCCGGCGCGCGCGG-CG GTTCCATCCCCAGAT TERM 884 1163228 - 1163170 - G 81 -16.8 -2.82516 | gap 3 GGCGTCAGCACCAGA TCGCGGAGCGC-GTC-GCGGAAGCGCGCG CCGG CGCGCGCTTCCACTGCCAGCGC-CAGCAA GCCGTACCCGATATT Rcas_0889 1165382 - 1163700 - | AMP-dependent synthetase and ligase TERM 885 1164172 - 1164220 + g 70 -11.7 -3.1585 | gap 2, overlap 1164170 1164185 1164199 CCGCGCACCAGCAGT TCGCCGATGCGTC--CCGGCGGC AGGTC GGCGCCGGTTGTCGCATCGACGA TCTTCGCTTCGGTCG Rcas_0890 1165840 - 1165394 - | amino acid-binding ACT domain-containing protein Rcas_0891 1166661 - 1165846 - | alpha/beta hydrolase fold Rcas_0892 1167659 - 1166841 - | alpha/beta hydrolase fold TERM 886 1167757 - 1167806 + r 100 -17.8 -3.59262 | GCACGCCCACCGGGG GACGG-CCGCGCGCATGGCGCCGG TCTC CCCGCTCC-TGCGCGCGGTCCGCC TTTGAAACTCTGAGG Rcas_0893 1169995 - 1167860 - | sulphate transporter Rcas_0895 1172374 - 1171550 - | hypothetical protein TERM 887 1171973 - 1172006 + g 75 -11.7 -3.55815 | gap 1, overlap 1171983 CGGTGTGGCATTGTG CGTCAGCGTCCGGCGC CAG GCGTCGAACG-TGGCG TTTGGCACGGTGTTT Rcas_0896 1172581 - 1173243 + | phage shock protein A, PspA TERM 888 1173272 - 1173309 + T 100 -27.9 -4.59773 | GGGTCCAATCGTTGT GGGGCGAGGCGTCGGTT GGCG AACCGATGCCTCGCCCC TTTTTGCAGGTGCGG TERM 889 1173415 - 1173401 - T 84 -10 -4.23723 | TAAGATCACCCAAAA CCTGGA CAA TCCAGG ACGCGGCGCGGCTGA Rcas_0897 1175912 - 1173744 - | alpha-glucan phosphorylase TERM 890 1175128 - 1175140 + g 71 -9.1 -3.78775 | CCCAGAACAATTTCC TGCGC AAT GCGCA TTTCCTGGTCGCCGC TERM 891 1175980 - 1175963 - R 76 -12.7 -3.33087 | opp_overlap 1175959, overlap 1175952 AATACACGCGGAGAA CAGCGCG ACGA CGCGCTG CTCGTACTATACACG Rcas_0898 1176859 - 1176035 - | hypothetical protein Rcas_0899 1178487 - 1176925 - | hypothetical protein Rcas_0900 1179477 - 1178986 - | hypothetical protein Rcas_0901 1181878 - 1179506 - | glycoside hydrolase family 3 protein TERM 892 1180735 - 1180712 - G 71 -13.8 -2.62024 | opp_overlap 1180717, overlap 1180708 1180709 GAGCAGCACAATCGA CTTGCGCGCG ATCT CGCGCGCCAG TTCACGCTGTGCTGG Rcas_0902 1182878 - 1181871 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_0903 1183869 - 1182862 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 893 1183631 - 1183608 - G 76 -10.2 -3.85698 | TCTCTTCCTGAGAAA GCGCCGCGAC ATCG ATCTCGGCGC CATTGACGCGATAGC TERM 894 1183841 - 1183831 - G 71 -4.6 -4.40358 | opp_overlap 1183832, overlap 1183832 1183833 ATCGAGCGCATAAAA CGCC CGG AGCG CTTCTGCGCGCAGAA Rcas_0904 1184728 - 1183877 - | binding-protein-dependent transport systems inner membrane component Rcas_0905 1185746 - 1184742 - | binding-protein-dependent transport systems inner membrane component Rcas_0906 1187866 - 1185887 - | extracellular solute-binding protein Rcas_0907 1188927 - 1187902 - | LacI family transcription regulator TERM 895 1188997 - 1188952 - R 76 -14.1 -3.09327 | opp_overlap 1188955 1188965 TGAGGGGATTCAACA TCTTCGGTAACGATACCGGCA TCCT TACCGGTATCGTTACCGATCC TAGCAAAAAATTGAT TERM 896 1189095 - 1189110 + r 74 -11.8 -3.53012 | opp_overlap 1189095 1189094 1189090 GCTGAGTAAACGAAG CCCCGC TGAC GCGGGG TTTAAAGACGGACCG TERM 897 1189166 - 1189117 - R 90 -15 -3.53224 | GACGCGGGGTTTAAA GACGGA-CCGCGCGCAGGCGAGAG GAGA CCGGCGCC-GCGCGCGGGTCCATC CCTCCGGCCGGGCGC TERM 898 1189956 - 1189906 - R 74 -13.1 -3.21199 | gap 2 CAGCGAGGAATCTAA GTGGGACGCGCC-CGACCC-CGCGC GCG GCGCGAGGGACGAGGCGCGCGGCGC GAGGGACGAGGCGCG Rcas_0908 1191926 - 1191072 - | hypothetical protein TERM 899 1192792 - 1192803 + G 70 -7.2 -4.09739 | GACCGGTCCATACCG CCGG CGGT CCGG TTTTGCGCACATTGC Rcas_0909 1192148 - 1193587 + | L-carnitine dehydratase/bile acid-inducible protein F Rcas_0910 1193604 - 1194821 + | L-carnitine dehydratase/bile acid-inducible protein F Rcas_0911 1195114 - 1196340 + | acyl-CoA transferase/carnitine dehydratase-like protein Rcas_0912 1196350 - 1197393 + | HpcH/HpaI aldolase Rcas_0913 1197409 - 1198467 + | dehydratase TERM 900 1198497 - 1198517 + T 70 -3.8 -4.65895 | overlap 1198492 1198491 1198512 TGATGGTCATTTGTC CGGCGCCC ACACC GGACGGCG TTTTTCAATGAAAGC Rcas_0914 1199297 - 1198488 - | enoyl-CoA hydratase/isomerase Rcas_0915 1199379 - 1199699 + | hypothetical protein TERM 901 1200921 - 1200962 + G 75 -4.3 -4.70659 | gap 1 CACCCCGGCAGTCCT GGCGATGTCGCGCTCTTTCG CGT CGAA-GAGGGCGATTACACC TTTTTCGATGTCGAA Rcas_0916 1199934 - 1201121 + | dihydroorotase Rcas_0917 1201165 - 1202169 + | NAD-dependent epimerase/dehydratase TERM 902 1202406 - 1202352 - T 93 -16.4 -3.53012 | overlap 1202403 1202404 GCGCGGCGGGCGAAA GCCCTCGCTCAGGGCATAGAAGCCCC CAA GGGGCTTGCACGATCTTAGCAAGGGC TTCAGCCCGCAGCAG TERM 903 1202466 - 1202514 + T 73 -8.7 -3.95852 | opp_overlap 1202482 1202484, overlap 1202484 TGGAGAAGACTGGCA GGGGGTGAAGGCGAAACAGGGCG TCA CGCCCTATTTCAACGTCTCTTCC TTTGCTTACTGCGCT TERM 904 1202498 - 1202482 - T 73 -10.1 -3.66178 | opp_overlap 1202466 1202484, overlap 1202484 GGGGTGAAGGCGAAA CAGGGCG TCA CGCCCTA TTTCAACGTCTCTTC Rcas_0918 1203347 - 1202520 - | YceI family protein TERM 905 1203325 - 1203305 - G 73 -11.1 -3.56325 | CGGCGATAAGGACAA TGAGCGCCG CAG CAGCGCCCA AAAACAGACGATTTC Rcas_0919 1203566 - 1206310 + | glycoside hydrolase family 3 protein Rcas_0920 1209368 - 1206753 - | ATPase TERM 906 1208639 - 1208658 + g 70 -10 -3.62046 | overlap 1208642 TCAGCGCGCCCATGT CGAGCGCA ATGA TGCGCTTG TTCTTCAACGCCTCG TERM 907 1208642 - 1208655 + g 71 -8.1 -3.9461 | overlap 1208639 GCGCGCCCATGTCGA GCGCA ATGA TGCGC TTGTTCTTCAACGCC Rcas_0921 1209719 - 1212046 + | alpha-L-rhamnosidase TERM 908 1212118 - 1212098 - T 89 -18.3 -3.08912 | GAGCACAGACAGAGA GGGCGCGTC TCA GACGCGCCC ACAGATGCGCCACAT TERM 909 1212712 - 1212753 + T 76 -10 -3.75153 | AGCCACCGGTACGAT GCCGCCGTCCTTGCGGCG GATGCG CGCTTCGAGGAACGCGGC TTTGCCTTCCGCCAG Rcas_0923 1215777 - 1214353 - | hypothetical protein Rcas_0924 1216775 - 1215774 - | fructose 1,6-bisphosphatase II TERM 910 1216284 - 1216274 - G 75 -3.2 -4.91109 | GGTCGAGCACAAAAA CAAC CAG GTCG CGGATTTCTTTGCCG TERM 911 1216475 - 1216427 - G 84 -17.4 -2.79796 | gap 2 GCGCAGGCGACCAGA GGGCGCCACGCGGCGCGACCGCCG CAA CCGCGATCGCGCCG-G-AGCGTCC CTGCACCAGGAGGCG TERM 912 1216655 - 1216622 - G 70 -10.3 -3.54676 | gap 1, opp_overlap 1216628 1216631, overlap 1216618 ATCCATCGAAATCAA GCAGATCAAGCG-TGG CCG CCATCGCGTGTTCTGC TGCTGCGTTCGCCTC Rcas_0925 1216974 - 1218428 + | fumarate lyase TERM 913 1218637 - 1218583 - f 100 -27.2 -3.53224 | GATCTGCGGGCTAAA GCCCTCGCTCAGGACGTGGAAGCCCC TCC GGGGCTTCCACGATCTCAGCCAGGGC TTCAGCCCGCAGCGC TERM 914 1218652 - 1218666 + F 76 -7.1 -4.47491 | CTTCAGCCCGCAGCG CCCAG GAATA CTGGG TTATTTTCTTAATCT TERM 915 1218949 - 1218895 - f 100 -17.1 -3.53224 | opp_overlap 1218916 GATCTGCGGGCTAAA GCCCTCGCTCAGGACGTGGAAGCCC TGGAG GGGCTTTCACGATCTCAGCCAGGGC TTCAGCCCGCAGCGC TERM 916 1218964 - 1218978 + F 76 -7.1 -4.47491 | CTTCAGCCCGCAGCG CCCAG GAATA CTGGG TTATTTTCTTAATCT TERM 917 1219261 - 1219207 - f 100 -17.1 -3.53224 | opp_overlap 1219228 GATCTGCGGGCTAAA GCCCTCGCTCAGGACGTGGAAGCCC TGGAG GGGCTTTCACGATCTCAGCCAGGGC TTCAGCCCGCAGCGC TERM 918 1219276 - 1219290 + F 76 -7.1 -4.47491 | CTTCAGCCCGCAGCG CCCAG GAATA CTGGG TTATTTTCTTAATCT TERM 919 1219573 - 1219519 - f 100 -17.1 -3.53224 | opp_overlap 1219540 GATCTGCGGGCTAAA GCCCTCGCTCAGGACGTGGAAGCCC TGGAG GGGCTTTCACGATCTCAGCCAGGGC TTCAGCCCGCAGCGC TERM 920 1219588 - 1219602 + F 76 -7.1 -4.47491 | CTTCAGCCCGCAGCG CCCAG GAATA CTGGG TTATTTTCTTAATCT TERM 921 1219886 - 1219832 - f 100 -27.2 -3.53224 | GATCTGCGGGCTAAA GCCCTCGCTCAGGACGTGGAAGCCCC TCC GGGGCTTCCACGATCTCAGCCAGGGC TTCAGCCCGCAGCGC TERM 922 1219901 - 1219915 + F 76 -7.1 -4.47491 | CTTCAGCCCGCAGCG CCCAG GAATA CTGGG TTATTTTCTTAATCT TERM 923 1219980 - 1219954 - f 73 -10.1 -3.64703 | gap 1, opp_overlap 1219964, overlap 1219959 CGCGGGCTATGGAAA GCG-AAGCCCGC CTGC GCGGGCTAGCGC GGATGATTCGGATTA TERM 924 1219974 - 1219959 - f 72 -11.8 -3.29324 | opp_overlap 1219964, overlap 1219954 GCTATGGAAAGCGAA GCCCGC CTGC GCGGGC TAGCGCGGATGATTC Rcas_0926 1220147 - 1221202 + | ATPase involved in chromosome partitioning-like protein TERM 925 1221447 - 1221409 - T 79 -14.5 -2.95476 | gap 1, overlap 1221407 AGGATGGATTACAGA CCGCGCGCGCAGCGCCGG TCTC CCGGCTCC-CGCACACGG GAGCGGGGCAGGGGG Rcas_0927 1222978 - 1221497 - | TPR repeat-containing protein TERM 926 1223535 - 1223545 + G 71 -8.2 -3.88291 | GGGCCCAGCGGGTTT GGGC CTT GCCC TTTCTGACCGTCCTG Rcas_0928 1223084 - 1224442 + | hypothetical protein TERM 927 1226420 - 1226445 + G 100 -9 -5.29782 | opp_overlap 1226420 TGCCAGGACCGACAA CGCCAGGGCA GGACAA TGCTCTGGTG TTTTTTGTGAATATC TERM 928 1228311 - 1228268 - g 71 -11.1 -3.44051 | gap 2, opp_overlap 1228278, overlap 1228271 CGCTGATGATGACAA CGACGACCCTTGCTGACGGCA GTTA TGCCTTCAGC-AGCGTCG-CG CCGCTCACCTATGTG TERM 929 1228309 - 1228271 - g 70 -12.5 -2.87243 | gap 1, opp_overlap 1228278, overlap 1228268 TGATGATGACAACGA CGACCCTTGCTGACGGCA GTTA TGCCTTCAGC-AGCGTCG CGCCGCTCACCTATG Rcas_0929 1226041 - 1234671 + | Cna B domain-containing protein Rcas_0930 1234810 - 1235592 + | hypothetical protein TERM 930 1235652 - 1235611 - g 71 -12.9 -3.05596 | CATCCTCGCAGGCAA CGCGCGCCGGGCGATTG CGCCAGAT CAGTCGTCTGGCGCGCG CCAACCTGTACGATT TERM 931 1235830 - 1235845 + G 70 -7.6 -4.07568 | opp_overlap 1235829 TTACATTGATGACAC TCCAGA GCGA TCTGGA TTTTCCGCGCGGCGA TERM 932 1237121 - 1237099 - g 80 -16.3 -2.67973 | overlap 1237090 ACACAACGTACAGCA CGTCGGCGC TGGCG GCGCCGACG ATGGCAGCGGCGGCG Rcas_0931 1235589 - 1237406 + | TrkA domain-containing protein Rcas_0932 1238309 - 1237473 - | ATP-NAD/AcoX kinase Rcas_0933 1239244 - 1238306 - | metalloenzyme domain-containing protein Rcas_0934 1239605 - 1240771 + | RNA-binding S1 domain-containing protein TERM 933 1240939 - 1240894 - T 77 -12 -3.59979 | gap 3, overlap 1240895 1240898 TTCGCTCAGGGTAAA CGCAGCG-A-GGAATC-TGCGCG GGT CGCGCACGACCCCGCGCGCTGCG CGGGGTGACCATGCC TERM 934 1240933 - 1240898 - T 72 -14 -2.65354 | gap 1, overlap 1240895 1240894 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCGCGC GCTGCGCGGGGTGAC TERM 935 1240998 - 1241019 + T 87 -17.3 -3.11072 | overlap 1241000 CACGCCTTGCTTATG CAGCCCCGC GCCA GCGGGGCTG TGTGTGTTCCGTGCG TERM 936 1241000 - 1241017 + T 76 -14.1 -3.11207 | overlap 1240998 CGCCTTGCTTATGCA GCCCCGC GCCA GCGGGGC TGTGTGTGTTCCGTG Rcas_0935 1242037 - 1241138 - | 6-phosphogluconate dehydrogenase-like protein Rcas_0936 1242287 - 1243495 + | GHMP kinase domain-containing protein Rcas_0937 1243854 - 1245008 + | peptidase C60 sortase A and B Rcas_0938 1245540 - 1245016 - | hypothetical protein Rcas_0939 1246574 - 1245558 - | beta-lactamase TERM 937 1245960 - 1245946 - G 72 -4.2 -4.63218 | overlap 1245947 TCGGTGCGAACAAAA GTTCCG CCA CGGAAT GAATACCCGAACGCG TERM 938 1246185 - 1246135 - G 72 -7.4 -4.2349 | overlap 1246136 TTGCTATAGCGAAAA GCCGCCCCTGGCGCAGCGTATC CCGTATC GACGCGCCGCACCAGGGCAAAC ACGTCGCAATCGTGA TERM 939 1246353 - 1246343 - G 73 -8.2 -4.0641 | overlap 1246344 GTTCATCGAGAGAAA GCGC GCC GCGC TCTGCCAGTCGCAAC Rcas_0940 1246637 - 1247032 + | hypothetical protein TERM 940 1247140 - 1247098 - f 90 -14.9 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT Rcas_0941 1247195 - 1248058 + | methyltransferase type 11 TERM 941 1248438 - 1248417 - g 71 -5.1 -4.43477 | gap 1, overlap 1248418 TGCAGCCAACCAAAA CGCTCTCGCC GAT GACG-GAGCA ATCGTAGAAGGTGCT Rcas_0942 1248121 - 1248492 + | hypothetical protein Rcas_0943 1249764 - 1248772 - | hypothetical protein TERM 942 1249695 - 1249652 - G 95 -11.1 -4.4648 | gap 1, overlap 1249654 ATCCCCAGGATAAAA GCCATCGTCCCACCCGATAC GCCGG GTATCAGGTCGG-CGATGCC CATGGCTATCCCCGT Rcas_0944 1251592 - 1250240 - | DEAD/DEAH box helicase domain-containing protein TERM 943 1251845 - 1251809 - H 100 -20.9 -3.31461 | opp_overlap 1251808 1251806 1251805 CATCCAGCGGCAGAA CAGCGCGCAGGCAAATC TGA GACCCGCCCGCGCGCTG CTCCTTCGTCCCTTC TERM 944 1252086 - 1252072 - g 71 -11.4 -3.43071 | overlap 1252075 CCGGACATTAAGGAA GACCGG ACG CCGGTC ACGATTGCGGATCGC Rcas_0945 1251958 - 1252731 + | histidinol-phosphate phosphatase, putative Rcas_0946 1253423 - 1254673 + | glucose-1-phosphate adenylyltransferase Rcas_0947 1254682 - 1255929 + | nucleotidyl transferase Rcas_0948 1255948 - 1256472 + | membrane-flanked domain-containing protein Rcas_0949 1257379 - 1256474 - | ribokinase-like domain-containing protein TERM 945 1256923 - 1256899 - G 71 -8.5 -3.93288 | overlap 1256902 TGGGATCGAACGAAA CCAGCGCGC CGGCGGC GCGCGCCAG ATCGATGGCGCGCAT TERM 946 1256918 - 1256902 - G 81 -15.1 -3.02881 | overlap 1256899 GATCGAACGAAACCA GCGCGCC GGC GGCGCGC GCCAGATCGATGGCG TERM 947 1258907 - 1258887 - g 75 -13.9 -3.07113 | opp_overlap 1258886 1258882 GATGATGTGATCGAA CCGCGCGAG ACG CGCGCGCGG GTGATTGCTGCGCTC Rcas_0950 1257441 - 1258985 + | carboxyl transferase Rcas_0951 1258996 - 1259340 + | sodium pump decarboxylase gamma subunit Rcas_0952 1259337 - 1259792 + | biotin/lipoyl attachment domain-containing protein TERM 948 1260259 - 1260308 + F 89 -16.4 -3.29144 | gap 2 ACCGGCAGGCGTGGC GCGGACG-CCCGAC-GGCGCAGCG GCAT CGCTCCGCCCGACGGGGCTTCCGC TTGTGGCGAGCATGG TERM 949 1261290 - 1261314 + G 74 -9.2 -3.88291 | CCTGGGATTGACCAT CGGCTCGACG ATGGG CGCCGAGTCG TTTCTGAGCCTGGTG Rcas_0953 1260493 - 1261623 + | sodium ion-translocating decarboxylase, beta subunit Rcas_0955 1262823 - 1263137 + | hypothetical protein Rcas_0956 1263134 - 1263376 + | hypothetical protein Rcas_0957 1263610 - 1264467 + | hypothetical protein TERM 950 1264903 - 1264915 + G 73 -3.3 -4.8048 | overlap 1264904 TGATGGGTTTTATTC GCCGA ATA TCGGA TTTTTGCTCTGAGAA TERM 951 1265443 - 1265431 - g 74 -4.8 -4.62904 | AAATATCGGTAAAAA GCGA TCTGC TCGC CCGATACGTGCATAA Rcas_0958 1264470 - 1265696 + | hypothetical protein Rcas_0959 1267193 - 1265778 - | integral membrane sensor signal transduction histidine kinase Rcas_0960 1267906 - 1267196 - | two component transcriptional regulator Rcas_0961 1268283 - 1267903 - | hypothetical protein Rcas_0962 1268807 - 1268280 - | hypothetical protein TERM 952 1268763 - 1268742 - G 81 -7.9 -4.41302 | opp_overlap 1268742, overlap 1268744 GAGGAAAGTAACAAA CATGGCGCC GTCG AGCGCCAGG TTGGTGAGTGTGCGC TERM 953 1268761 - 1268744 - G 71 -9.1 -3.797 | opp_overlap 1268742, overlap 1268742 GGAAAGTAACAAACA TGGCGCC GTCG AGCGCCA GGTTGGTGAGTGTGC TERM 954 1269112 - 1269076 - R 70 -12.4 -2.86271 | gap 2, opp_overlap 1269109, overlap 1269073 GCGCTATCACAAGCA GCAGCGTGGCGACGTTGC AAC GCAACGTCG-C-CGCTGG AATACACCAGGTTTA Rcas_0963 1269739 - 1269125 - | hypothetical protein TERM 955 1270048 - 1270036 - R 70 -10.5 -3.54459 | CGAAGTCGCGCGAAA GCGCC GCA GGCGC CGATCATCGCCCGGA Rcas_0964 1270506 - 1270075 - | hypothetical protein TERM 956 1270450 - 1270479 + g 71 -13.5 -2.6155 | overlap 1270449 1270452 GAATCGCTGTCGCAG GATCGACGCCCGG CGCG CCGGTCGCCGATC ATTGATATTCGCCAG Rcas_0965 1270574 - 1270987 + | hypothetical protein Rcas_0966 1271116 - 1271967 + | phosphonoacetaldehyde hydrolase Rcas_0967 1272398 - 1273132 + | putative esterase TERM 957 1273527 - 1273494 - f 86 -14.7 -3.30338 | opp_overlap 1273495 1273496, overlap 1273483 1273496 ACAATCGGCGTATAA TATGACCAATCGGTC ATAT GACCGATTGGTCACT TTGATAGGAGACGGT TERM 958 1273495 - 1273526 + F 95 -16 -3.72576 | opp_overlap 1273494 1273483 1273496, overlap 1273496 CAATCGGCGTATAAT ATGACCAATCGGTC ATAT GACCGATTGGTCAC TTTGATAGGAGACGG TERM 959 1273525 - 1273496 - f 91 -19.5 -3.21772 | opp_overlap 1273495 1273496, overlap 1273494 1273483 AATCGGCGTATAATA TGACCAATCGGTC ATAT GACCGATTGGTCA CTTTGATAGGAGACG TERM 960 1273496 - 1273525 + F 88 -19.5 -2.83403 | opp_overlap 1273496 1273494 1273483, overlap 1273495 AATCGGCGTATAATA TGACCAATCGGTC ATAT GACCGATTGGTCA CTTTGATAGGAGACG Rcas_0969 1273560 - 1274210 + | TetR family transcriptional regulator Rcas_0970 1274215 - 1275066 + | ABC transporter related Rcas_0971 1275063 - 1275773 + | ABC-2 type transporter TERM 961 1275950 - 1275969 + G 100 -5 -5.61596 | gap 1, overlap 1275951 1275952 GACCTGACGCCGTAC TAC-CCGGC GCT GCTGGGGTA TTTTTTTGTCACCAT TERM 962 1275951 - 1275967 + G 74 -5.7 -4.45201 | overlap 1275950 1275952 ACCTGACGCCGTACT ACCCGGC GCT GCTGGGG TATTTTTTTGTCACC Rcas_0972 1275770 - 1276510 + | hypothetical protein Rcas_0973 1276516 - 1277103 + | metal dependent phosphohydrolase TERM 963 1277677 - 1277631 - g 72 -3.8 -4.56597 | gap 3, opp_overlap 1277674, overlap 1277632 1277634 1277635 CGTGTTCTTCAAAAA CCATGGCGCG-ACGGCTGGAACA TCGC TGCTCCATCCACACGCGC-A-GG CAGTGGCGCTGCCGG TERM 964 1278125 - 1278149 + G 78 -2.8 -5.00884 | opp_overlap 1278123 1278125, overlap 1278125 1278126 1278148 GGATGTTCATCAATA CGG-CGCTGCCC GAA GAG-AGCGCCCG TTTTTTGCGAAACGT Rcas_0974 1277179 - 1278204 + | galactose-1-phosphate uridylyltransferase Rcas_0975 1278191 - 1279798 + | propionyl-CoA carboxylase TERM 965 1280223 - 1280234 + G 81 -7.2 -4.46212 | CGTCTGGTTGCACTG GCGC AATT GCGC TTTTATCGTGAAACA Rcas_0976 1279809 - 1280471 + | hypothetical protein Rcas_0977 1280471 - 1281241 + | enoyl-CoA hydratase/isomerase Rcas_0978 1282226 - 1281372 - | hypothetical protein Rcas_0979 1284425 - 1282446 - | carbamoyl-phosphate synthase L chain ATP-binding Rcas_0980 1285859 - 1285128 - | hypothetical protein TERM 966 1285250 - 1285274 + g 81 -13.6 -3.59979 | gap 1, opp_overlap 1285247 GATCGGAGAGGAGGG CTGCGTCGCGC AACG GCGCG-CGCAG TTTCACCTGGCGCGC TERM 967 1285974 - 1285963 - H 73 -4.4 -4.67563 | TAACAGAAAGCAAAA CTGT TATC ACAG GAGAGTCACATCCAT Rcas_0981 1285991 - 1287325 + | hydroxymethylglutaryl-CoA reductase, degradative TERM 968 1287957 - 1287930 - g 88 -17 -3.02144 | overlap 1287932 CGATGCGCTGGAATA CACCGCCGCTGC CGGA GCAGCGGCGCTG CTGATCGGTCCGGCG TERM 969 1287955 - 1287932 - g 75 -13.8 -3.06815 | overlap 1287930 ATGCGCTGGAATACA CCGCCGCTGC CGGA GCAGCGGCGC TGCTGATCGGTCCGG Rcas_0982 1287472 - 1288518 + | hypothetical protein Rcas_0983 1288523 - 1289677 + | acetyl-CoA acetyltransferase-like protein Rcas_0984 1289693 - 1290091 + | hypothetical protein TERM 970 1290775 - 1290817 + T 93 -16.3 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGCTGCG TTTACCCTGAGCGAA TERM 971 1290973 - 1290945 - T 70 -3.4 -4.67353 | opp_overlap 1290945 1290948, overlap 1290948 TCAGCCAGGGAAAAA TAT-CTCGATCAAG CGA CTTGAT-GAGTATA TTGCATAGCTTTGTC Rcas_0988 1292055 - 1291498 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_0989 1292200 - 1292856 + | protein-L-isoaspartate O-methyltransferase TERM 972 1292993 - 1293007 + G 74 -4.9 -4.59109 | opp_overlap 1292992 1292993 ACCGGCGCGACAAAC CTGGC AAGCA GCCGG TTTTTGACGAATCTC Rcas_0990 1292873 - 1293547 + | peptidase M50 Rcas_0991 1293558 - 1294322 + | Triose-phosphate isomerase TERM 973 1294475 - 1294433 - T 93 -16.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT TERM 974 1294580 - 1294613 + T 86 -12.3 -3.96216 | opp_overlap 1294586, overlap 1294586 TGTGCCTTGAACGCG GGACAACGCCGGACC GCCA GGACCGGCGTATTCC TTCTTTCCCTCGCAG TERM 975 1294586 - 1294607 + T 76 -12.9 -3.38135 | opp_overlap 1294586, overlap 1294580 TTGAACGCGGGACAA CGCCGGACC GCCA GGACCGGCG TATTCCTTCTTTCCC TERM 976 1294607 - 1294586 - T 76 -12.9 -3.31322 | opp_overlap 1294580 1294586 TTGAACGCGGGACAA CGCCGGACC GCCA GGACCGGCG TATTCCTTCTTTCCC Rcas_0993 1295804 - 1295421 - | response regulator receiver protein TERM 977 1296566 - 1296543 - g 74 -6 -4.45083 | gap 1, opp_overlap 1296552 1296564, overlap 1296544 1296546 TCGAGACGTACAAAA GCAGCCAACCG CAG CAGTTG-CCGC CCGTTGGCGTGATTG TERM 978 1296854 - 1296842 - g 74 -9.1 -3.92373 | CACCGCATCGACAAA CCAGG GCA CCTGG CAGACATTGTGACAT Rcas_0994 1296347 - 1298707 + | ATP-dependent protease La Rcas_0995 1301325 - 1298947 - | diguanylate cyclase with GAF sensor TERM 979 1299573 - 1299541 - G 76 -6.2 -4.56597 | GTGCTCGCCGAAAAA GCGCTGTCTGTGCA GATGA TACACTGCCAGCAC TCCTAGCGCCTTCCC Rcas_0996 1302632 - 1301442 - | PAS/PAC sensor signal transduction histidine kinase TERM 980 1301631 - 1301612 - G 78 -10.6 -4.10007 | opp_overlap 1301624, overlap 1301601 1301602 1301613 AGAAGCGCTCGAAAA TGCGCGCG AGAT CGCGCGCC GGAATACCGATGCCG TERM 981 1301630 - 1301613 - G 75 -14.1 -3.05522 | opp_overlap 1301624, overlap 1301601 1301602 1301612 GAAGCGCTCGAAAAT GCGCGCG AGAT CGCGCGC CGGAATACCGATGCC Rcas_0997 1303355 - 1302663 - | two component transcriptional regulator Rcas_0998 1304616 - 1303441 - | galactokinase TERM 982 1304265 - 1304247 - G 74 -10.2 -3.78775 | CGGCTGATGACGAAA GCCCCGCA CCG CGCGGGAC ATCACTGGCGATCAG TERM 983 1305855 - 1305875 + G 73 -12.5 -3.15861 | overlap 1305865 1305868 AGGCGGCGCGCGCGT TGAGCGCCG TTC CGGCGCGCA TTAATGGGCGTCCTG Rcas_0999 1304888 - 1307128 + | hypothetical protein TERM 984 1309778 - 1309814 + G 72 -12.4 -3.35679 | gap 2, opp_overlap 1309777 1309776 ACCGGGACAGGAAGG GCGCAG--CGCCGATTAC GAG GTAAGCGGCGAACTGCGC TTCTACCTGCGCGGG Rcas_1000 1307187 - 1310051 + | hypothetical protein Rcas_1001 1310993 - 1310118 - | alpha/beta hydrolase fold TERM 985 1310452 - 1310468 + g 77 -2.1 -5.0133 | overlap 1310454 AAGGCGGAGGGCGTG CGTCCCC AGT GGGCAAG TTTTTTGCGCAGGTA TERM 986 1310932 - 1310912 - G 73 -12.5 -3.20227 | overlap 1310910 CGTGAAGCAGCAACA GCGGCGGAC CAG ACCCGCCGC GCACCAGATGAATCT Rcas_1002 1311104 - 1311949 + | NERD domain-containing protein Rcas_1003 1314092 - 1312488 - | L-aspartate oxidase TERM 987 1313944 - 1313983 + g 70 -10 -3.55444 | CCGCGCCCGATGATG CCGCCCTGCGCGTAG-CG CGTGTT CGACT-CGCGCGGGTCGG TTTCGCGCGTCAGCA Rcas_1004 1315364 - 1314333 - | quinolinate synthetase Rcas_1005 1316233 - 1315364 - | nicotinate-nucleotide pyrophosphorylase TERM 988 1315444 - 1315420 - G 75 -3.4 -4.82154 | overlap 1315421 AACTGACATCAAAAA CGCGCGCCGA GTGGG TCAGAGCGCC GATGGAAATGTCGTC TERM 989 1316497 - 1316524 + H 74 -11.2 -3.53444 | opp_overlap 1316514 AACAGTGTGTCCATT CGTGGCGCAAGA AGAA TCGCGCGCCACG TTTACCCACAAATCG TERM 990 1316919 - 1316900 - H 71 -9.2 -3.80893 | ATTGCAGAACGGAAA CGCCGCGA CCCA TTGCGGCG CCAGACGTGACGATG Rcas_1006 1316926 - 1317186 + | hypothetical protein Rcas_1007 1317421 - 1317209 - | YcfA family protein Rcas_1008 1317678 - 1317418 - | hypothetical protein TERM 991 1318497 - 1318524 + H 74 -11.2 -3.53444 | opp_overlap 1318514 GACGGTGTGTCCATT CGTGGCGCAAGA AGAA TCGCGCGCCACG TTTACCCACAAATCG Rcas_1009 1319117 - 1320172 + | regulatory protein, DeoR TERM 992 1322168 - 1322207 + G 93 -13.4 -4.13767 | overlap 1322169 AGGATGGGGATTGGC GCCTGCCGCAAGGTCTGC TGGA GCGGGCCGTGCGGCTGGG TTTTGCCCTGCACGA TERM 993 1322169 - 1322206 + G 88 -16.9 -3.08046 | overlap 1322168 GGATGGGGATTGGCG CCTGCCGCAAGGTCTGC TGGA GCGGGCCGTGCGGCTGG GTTTTGCCCTGCACG Rcas_1010 1320175 - 1322754 + | CRISPR-associated helicase Cas3 Rcas_1011 1322754 - 1324499 + | hypothetical protein TERM 994 1324537 - 1324520 - f 80 -4.1 -5.03314 | TTCACGCCTAAAAAA GGAGATG AACC CATGTCC GACAACTTGAAACCG Rcas_1012 1324532 - 1325479 + | CRISPR-associated autoregulator DevR family protein protein Rcas_1013 1325482 - 1326177 + | hypothetical protein Rcas_1014 1326665 - 1326339 - | hypothetical protein Rcas_1015 1326951 - 1326646 - | hypothetical protein Rcas_1016 1326971 - 1327324 + | hypothetical protein TERM 995 1328879 - 1328847 - T 70 -10.4 -3.54741 | GACGATCCCGTCAAA CGTGGCGGGCAGGA GCGCA TCCAGCCCGACGCG TCCGCGACTGGTGGT TERM 996 1329443 - 1329466 + T 76 -9.4 -4.07568 | overlap 1329452 GATGATCGGGCTGAC CGCCACGCGG CCGC CCACGCGGCG TTTTCGCCGGGCGAA TERM 997 1330008 - 1330027 + T 72 -13.6 -2.53263 | TGATGAGGCACCCGT CGCCTTCC CCCC GGAAGGCG TGGATTGAAACTGCG Rcas_1020 1330565 - 1330245 - | DNA polymerase beta subunit Rcas_1022 1332994 - 1331690 - | PUCC protein TERM 998 1332387 - 1332366 - G 70 -7.9 -4.08945 | gap 1, opp_overlap 1332368 ATCATCTGCGCAAAA CTGCGC-CGC TCA GCGGGCGCCG CTTCGTCGTCGCGCG TERM 999 1332856 - 1332843 - G 72 -3.8 -4.58395 | TGGATCGGCGAAAAA GCGT AGGGCA ACGC GATCAGCAGCGCCAC Rcas_1023 1333202 - 1333486 + | hypothetical protein Rcas_1024 1336034 - 1333533 - | DEAD/DEAH box helicase domain-containing protein TERM 1000 1333563 - 1333583 + g 91 -9.7 -4.58395 | CAGCGCCAGTTGCAT CTTGCGCAC CCG GTCCGCAAG TTTTTCGGAACTGAG TERM 1001 1333711 - 1333670 - G 93 -17.2 -3.44051 | opp_overlap 1333670, overlap 1333633 1333671 TGTCGACCACGACAA TCCGCCCTGCGGCGACGC GCGCCA GCGCTGCCGCAAGGCGGC TCTGCTCTAGCTGGC TERM 1002 1333670 - 1333711 + g 77 -15 -2.8655 | opp_overlap 1333633 1333670 1333671 TGTCGACCACGACAA TCCGCCCTGCGGCGACGC GCGCCA GCGCTGCCGCAAGGCGGC TCTGCTCTAGCTGGC TERM 1003 1333710 - 1333671 - G 91 -20.7 -2.66216 | opp_overlap 1333670, overlap 1333633 1333670 GTCGACCACGACAAT CCGCCCTGCGGCGACGC GCGCCA GCGCTGCCGCAAGGCGG CTCTGCTCTAGCTGG TERM 1004 1334002 - 1333961 - G 75 -13.6 -3.04144 | gap 1, overlap 1333986 GTTGGACGCTGAAGA GCGGCGCGTCTGCGCCGGC AATCG ACCATCGCTG-CGCGCCGC GCGCGGAATCGAACA TERM 1005 1334893 - 1334908 + g 70 -10.4 -3.65902 | TCCTGCGCAATCGCG TCGCGG GCTG CCGCGA TTTCGATCAACTCCA TERM 1006 1336140 - 1336160 + r 74 -11.9 -3.54543 | GATAATGGTCCGGCG GCGTAGCGA GCG TTGCTACGC TTTCCCAACGTCGGT TERM 1007 1336409 - 1336364 - R 100 -17.5 -4.03413 | ACGCCGGCAGAGAAA CCGCAGCGCGCCACACCGCTG GATG CAACGCTCCGGCGTGCTGCGG TCCATCACACGATCC Rcas_1025 1337290 - 1336424 - | hypothetical protein TERM 1008 1337915 - 1337953 + H 100 -16 -4.13246 | opp_overlap 1337918 1337921, overlap 1337917 1337918 1337921 GGGGTATAGTTGCCG AAACAGGCGGGCGGAAGC AAC GTTTCCGCCCGCTTGCTC TTTGTGTGTCGCATC TERM 1009 1337917 - 1337951 + H 100 -18.6 -3.65996 | opp_overlap 1337918 1337921, overlap 1337915 1337918 1337921 GGTATAGTTGCCGAA ACAGGCGGGCGGAAGC AAC GTTTCCGCCCGCTTGC TCTTTGTGTGTCGCA TERM 1010 1337918 - 1337950 + H 100 -22.1 -2.79116 | opp_overlap 1337918 1337921, overlap 1337917 1337915 1337921 GTATAGTTGCCGAAA CAGGCGGGCGGAAGC AAC GTTTCCGCCCGCTTG CTCTTTGTGTGTCGC TERM 1011 1337950 - 1337918 - H 100 -17.7 -3.55071 | opp_overlap 1337918 1337917 1337915 1337921, overlap 1337921 GTATAGTTGCCGAAA CAGGCGGGCGGAAGC AAC GTTTCCGCCCGCTTG CTCTTTGTGTGTCGC TERM 1012 1337947 - 1337921 - H 85 -18 -2.60813 | opp_overlap 1337921 1337918 1337917 1337915, overlap 1337918 TAGTTGCCGAAACAG GCGGGCGGAAGC AAC GTTTCCGCCCGC TTGCTCTTTGTGTGT TERM 1013 1337921 - 1337947 + H 100 -20.2 -3.53125 | opp_overlap 1337918 1337921, overlap 1337918 1337917 1337915 TAGTTGCCGAAACAG GCGGGCGGAAGC AAC GTTTCCGCCCGC TTGCTCTTTGTGTGT TERM 1014 1338163 - 1338175 + G 78 -3.3 -5.07053 | TGGTCTCTTTTTTGC CGCCA GCC TGACG TTTTTTCCGGTCATT TERM 1015 1338286 - 1338306 + G 72 -2.6 -4.68593 | gap 2, overlap 1338287 GAGTCTAGCGCTCCT C-CAAC-GCG CGT CGCCGTTGTG TTTTTCGATCATCGC TERM 1016 1338687 - 1338712 + G 78 -10.5 -4.05389 | gap 1 CACTGCGGGAGTTGC TC-CCGATCGTG CGC CGCGATCGGCGA TTTATGCTGTATCTG Rcas_1026 1338035 - 1339258 + | major facilitator transporter TERM 1017 1339485 - 1339450 - T 72 -14 -2.65354 | gap 1, overlap 1339447 1339446 CTCAGGGTAAACGCA GCGCGGAATC-TGAGCG GGT CGCGCACGACCCCGCGC GCTGCTCGGGGTGAC Rcas_1027 1341098 - 1339704 - | hypothetical protein TERM 1018 1340289 - 1340303 + g 73 -11.4 -3.58343 | opp_overlap 1340274 TGCCGCCAATGTCCG GCGCAG ACT CTGCGC TTTCAAGGTCATGCG TERM 1019 1340671 - 1340635 - G 100 -26.7 -3.06162 | overlap 1340614 TACCGCACGGCAAGA TCGCCGCTGCGGTAGCG CGC CGCCACCGCAGCGGCAA ACCGCGCCAGGTCTG TERM 1020 1341885 - 1341895 + G 75 -3.2 -4.87786 | overlap 1341880 CTATCTTCTGGCGCT CGGA GCA TTCG TTTTTGTGCCATTGC Rcas_1028 1341280 - 1342032 + | methyltransferase type 11 Rcas_1029 1342052 - 1343134 + | glycosyl transferase family protein TERM 1021 1343181 - 1343156 - g 81 -15.5 -3.08679 | opp_overlap 1343156 GGGCTGCACTCAATA CGGCATCGCGT TCAC ACGCGATGCCA TTCCATCTGCGATTG TERM 1022 1343156 - 1343181 + G 73 -13.3 -3.13475 | opp_overlap 1343156 GGGCTGCACTCAATA CGGCATCGCGT TCAC ACGCGATGCCA TTCCATCTGCGATTG TERM 1023 1343920 - 1343910 - g 73 -6.8 -4.26076 | opp_overlap 1343912, overlap 1343911 GGATTGCTACGAAAA TGGC GTT GCCA TCACGCCGATGCCAC Rcas_1030 1343131 - 1344615 + | sugar transferase TERM 1024 1346365 - 1346377 + G 70 -10.5 -3.59979 | overlap 1346375 TCAGGGGATGGAGCG GCGCG AGT CGCGC TTTCCGATGCACCGC Rcas_1031 1344739 - 1347420 + | hypothetical protein Rcas_1032 1349060 - 1347708 - | aminotransferase class-III TERM 1025 1347862 - 1347894 + g 79 -11.3 -3.94381 | overlap 1347889 TCCTGGTAGACGCGC GCACCCATATTCGCC TCC GCCGGATATGGCTGC TTTGTCGCCTTATCT Rcas_1033 1349342 - 1349950 + | hypothetical protein Rcas_1034 1351377 - 1350031 - | diaminopimelate decarboxylase Rcas_1035 1353054 - 1351603 - | potassium/proton antiporter TERM 1026 1351897 - 1351911 + g 70 -12.8 -2.9675 | opp_overlap 1351897, overlap 1351892 CTGGACCCCAAGCCA GCGCGC CAC GCGCGC TATCGTTGTCCCCTG TERM 1027 1352157 - 1352130 - G 74 -2.6 -4.83615 | overlap 1352133 1352137 GACGCGCCACAAAAA TAAGGAATGCTG ACAT CAGCAGCCCCTC GCCGATCAGTGGAAC TERM 1028 1352154 - 1352133 - G 76 -6.5 -4.52873 | overlap 1352130 1352137 GCGCCACAAAAATAA GGAATGCTG ACAT CAGCAGCCC CTCGCCGATCAGTGG TERM 1029 1353235 - 1353255 + r 71 -8.2 -4.07568 | GGTTTTCCCTTTCCC CGCCGTCC CTCAC GGGTGGCG TTTTCAGGGAAGAGG Rcas_1036 1354020 - 1353514 - | redoxin domain-containing protein Rcas_1037 1354244 - 1355698 + | putative PAS/PAC sensor protein TERM 1030 1356294 - 1356271 - f 73 -10.2 -3.68988 | opp_overlap 1356285, overlap 1356273 GGTGACGGAAGAGAA GACGAGCAGC AACT GCTGCCCGGC GCTATCCTGCAGCGT TERM 1031 1356292 - 1356273 - f 74 -11.4 -3.42482 | opp_overlap 1356285, overlap 1356271 TGACGGAAGAGAAGA CGAGCAGC AACT GCTGCCCG GCGCTATCCTGCAGC TERM 1032 1356361 - 1356344 - f 75 -8.3 -4.16943 | overlap 1356345 GTCGAGAGGCGAAAA TCGGGCG CAGG CGCCCGT AGCCAGGGGCGTCGG TERM 1033 1357418 - 1357453 + G 71 -13.3 -3.07962 | gap 1, overlap 1357386 GCGGCGGTGCGGCGT GCTGCGCGC-CAACCG CGTCT CAGTTGCGCGCGCGGC TGTTCGGGTGTCCGC Rcas_1040 1357039 - 1357689 + | LuxR family transcriptional regulator Rcas_1041 1358978 - 1357692 - | major facilitator transporter Rcas_1042 1359934 - 1359005 - | NHL repeat-containing protein TERM 1034 1360599 - 1360645 + G 72 -13.7 -2.79183 | gap 2 ATCTGCTGACGGTGC TGCGGGT-G-GCGCAGCGCGGCG GTG CGGCGTGCTGCGCGCCAACCGCG TCTCATACCAATGAC Rcas_1043 1360250 - 1360666 + | response regulator receiver protein TERM 1035 1360759 - 1360716 - f 82 -12.4 -3.59979 | gap 1, opp_overlap 1360720, overlap 1360717 1360720 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCCCGCTCTG CTCGGGGTGACAATG TERM 1036 1360757 - 1360717 - f 73 -13.4 -2.75844 | opp_overlap 1360720, overlap 1360716 1360720 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCCCGCT-C TGCTCGGGGTGACAA TERM 1037 1360755 - 1360720 - f 78 -16.2 -2.65354 | gap 1, opp_overlap 1360720, overlap 1360717 1360716 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCCCGC TCTGCTCGGGGTGAC Rcas_1044 1360779 - 1361051 + | LuxR family transcriptional regulator Rcas_1045 1361486 - 1361115 - | hypothetical protein TERM 1038 1361194 - 1361175 - G 76 -10.6 -3.85698 | opp_overlap 1361182 CGTGTCTCTGATAAA CGCCGGCG CGTG CGCCGGAG TCGGCGGAAACTGTT Rcas_1046 1362469 - 1361957 - | hypothetical protein TERM 1039 1362805 - 1362827 + G 76 -9 -4.07133 | opp_overlap 1362791 ACTGGCTACGGATCG CGCCAGGGGC GCT GGCGCTGGCG TTGTTTCTGGCGCTG TERM 1040 1364783 - 1364769 - g 71 -11.4 -3.53761 | GAAGCGGGTGCGAAA GTCGCG CAG CGCGAC GTGCCGCCGCTCGAA Rcas_1047 1362723 - 1364984 + | glycosyl transferase family protein Rcas_1048 1365906 - 1365466 - | hypothetical protein TERM 1041 1365666 - 1365690 + g 70 -7.8 -3.97947 | gap 1, opp_overlap 1365669, overlap 1365669 ACCCCTGCGCTGCCA GAAGCGCACGC ACCA GCG-GCGCGTC TTTGTGCTGAATGGC Rcas_1049 1366386 - 1366201 - | hypothetical protein Rcas_1050 1366768 - 1366370 - | hypothetical protein Rcas_1051 1367663 - 1366803 - | 2,5-didehydrogluconate reductase Rcas_1052 1368522 - 1368127 - | cupin 2 domain-containing protein TERM 1042 1369797 - 1369741 - g 78 -10.5 -3.96892 | AACCGGGAGTACAAA CGGCTCTTCGGTGCGCCGCCGCTGCGC GAT GTGCAACGGCTGCGCGACGCAATGGCG TGAATGCTGACAGGA Rcas_1054 1368865 - 1369800 + | AraC family transcriptional regulator TERM 1043 1370233 - 1370243 + G 93 -8.2 -5.07567 | CCTGTTCTGTTGGAC GGCG GCG CGCC TTTTTTACCCTCTCC Rcas_1055 1369819 - 1370346 + | deaminase-reductase domain-containing protein Rcas_1056 1370768 - 1370451 - | hypothetical protein Rcas_1057 1373139 - 1370983 - | multi-sensor signal transduction histidine kinase TERM 1044 1373112 - 1373124 + g 78 -4.8 -4.74504 | overlap 1373100 GATGCGCATTGTCAA TCGC TGTGC GCGA TTTTTGGCTTGACAT TERM 1045 1374066 - 1374050 - g 78 -6.6 -4.56775 | ACGGTGCTGGAAAAA CAGTTG CTGAC CAACTG CGGCATCCAGATCAT Rcas_1058 1373498 - 1375459 + | ABC-type dipeptide transport system periplasmic component-like protein TERM 1046 1375477 - 1375507 + F 100 -18.3 -3.91027 | opp_overlap 1375495 GGTCTGGCAGTTCCG TGCGCGTGCGGGG ACCAA CCCGGCACGCGCA TTTCGTATATAATTA Rcas_1059 1375556 - 1376758 + | binding-protein-dependent transport systems inner membrane component Rcas_1060 1376771 - 1377775 + | binding-protein-dependent transport systems inner membrane component TERM 1047 1378718 - 1378733 + G 70 -10.4 -3.56821 | GTGTCGCTTCGCCGA CCGCTG CGCA CAGCGG TTTGCGCGCTGTGAT Rcas_1061 1377837 - 1378829 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_1062 1378845 - 1379855 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_1063 1379868 - 1380887 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1048 1381411 - 1381378 - g 70 -11.7 -3.16564 | gap 1 TCCGTACTTTATCAA CCGCTACCCCCACGAA TTC TCCG-GCGGGCAGCGG CAGCGCATCGGCATC Rcas_1064 1380914 - 1381945 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_1065 1382543 - 1383121 + | hypothetical protein TERM 1049 1384018 - 1384060 + T 82 -12.1 -3.59979 | overlap 1384019 ATGGTCACCCCGAGC AGCA-CGAGGGGTCGTGCGCG ATC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1050 1384019 - 1384059 + T 79 -15.6 -2.75844 | overlap 1384018 TGGTCACCCCGAGCA GCA-CGAGGGGTCGTGCGCG ATC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 1051 1384188 - 1384246 + T 77 -8.2 -4.31397 | gap 3, opp_overlap 1384188 TTTTTGAGCAAAGAA TCCGGTA-TCGTCCGGTGCAGCCCGCGGC TTCA GCCGCCGGGTGCA--GAGCGAATGCCGGA TTATTTTGTACAGGT Rcas_1066 1385203 - 1384316 - | YdjC family protein Rcas_1067 1385854 - 1385219 - | pyridoxamine 5'-phosphate oxidase TERM 1052 1385268 - 1385246 - G 74 -14.8 -2.5955 | overlap 1385242 ACGTTCGATAATCCA GCGACCGGCG TCA CGCCGGTAGC GCAAACGGTCATGCA Rcas_1068 1387262 - 1386147 - | glycosyl transferase group 1 Rcas_1069 1387687 - 1388193 + | peptidoglycan-binding LysM TERM 1053 1388403 - 1388363 - T 86 -15 -3.31144 | gap 1, opp_overlap 1388374, overlap 1388364 1388374 CGGTGATGCCCAGAA TCAA-CAAAAAACCCTCGC AAAC GCGAGGGTTTTTTGATTGC GGCGCAGCAACGCGA TERM 1054 1388402 - 1388364 - T 85 -18.5 -2.58544 | gap 1, opp_overlap 1388374, overlap 1388363 1388374 GGTGATGCCCAGAAT CAA-CAAAAAACCCTCGC AAAC GCGAGGGTTTTTTGATTG CGGCGCAGCAACGCG TERM 1055 1388374 - 1388391 + T 100 -12.7 -5.26875 | opp_overlap 1388364 1388363 1388374 AGAATCAACAAAAAA CCCTCGC AAAC GCGAGGG TTTTTTGATTGCGGC TERM 1056 1388391 - 1388374 - T 100 -12.7 -5.57396 | opp_overlap 1388374, overlap 1388364 1388363 AGAATCAACAAAAAA CCCTCGC AAAC GCGAGGG TTTTTTGATTGCGGC Rcas_1070 1389075 - 1388419 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1057 1389269 - 1389258 - H 70 -4.4 -4.46926 | GACTCTACTACAAAA GTTC TATC GAAC AGGCTTGCGGTTCCA Rcas_1071 1389315 - 1389971 + | SOS-response transcriptional repressor, LexA TERM 1058 1390436 - 1390472 + G 86 -13.6 -3.90744 | overlap 1390428 GTCGGTGGCGTCGCT GGCAGCGGCCGCCGCG TGCGC TGTGGTGGCCGCCGTC TTCTTTGCCCAGGGC TERM 1059 1390554 - 1390592 + G 79 -9.5 -4.19704 | gap 1, opp_overlap 1390561 CTTCTCCTCCACCGC GCGAATATCCGGCGCCTG CGCG CAGGCGCCG-AGAACCGC TTTTAGATGACGTTC TERM 1060 1390587 - 1390561 - g 78 -14.5 -3.02511 | gap 1, opp_overlap 1390554 TCCACCGCGCGAATA TC-CGGCGCCTG CGCG CAGGCGCCGAGA ACCGCTTTTAGATGA Rcas_1072 1390002 - 1390598 + | hypothetical protein Rcas_1073 1391752 - 1390595 - | FAD dependent oxidoreductase TERM 1061 1391320 - 1391309 - G 72 -7.2 -4.13945 | ATGCGGATCGCAAAA CCCG TCGT CGGG ACCAAAGGTTGCGCC Rcas_1074 1393443 - 1391791 - | modification methylase NspV TERM 1062 1391952 - 1391934 - G 70 -7.4 -4.07568 | opp_overlap 1391934 1391940 1391942 1391943 TTTCTTCTCTGAAAA GGAGTCTC TGG AAGACCCC TTCCGTATATTCTAC Rcas_1076 1395752 - 1394118 - | recombination factor protein RarA TERM 1063 1394911 - 1394935 + g 71 -5 -4.40804 | gap 1 AGCCAGTACAGTGCC GCGTC-GGGAT CGCT ATCACGGACGC TTTTGTGCAATGCTG TERM 1064 1395686 - 1395651 - G 71 -8.8 -3.85817 | ATCCTGCCCGACAAA CTCATCGAGCGCGCGC GGGC GCATGCGCGCGGCGAG CGGCGCCTGACGGCT TERM 1065 1396060 - 1396089 + r 100 -12.1 -5.40072 | opp_overlap 1396059 1396061 1396078, overlap 1396061 GCCTGGATCTTAAAG ACGGGGCAGGC AATCAAAC GCCTGCCCCGG TTTTTTTAACGCCGG TERM 1066 1396061 - 1396088 + r 95 -15.6 -3.83561 | opp_overlap 1396059 1396061 1396078, overlap 1396060 CCTGGATCTTAAAGA CGGGGCAGGC AATCAAAC GCCTGCCCCG GTTTTTTTAACGCCG TERM 1067 1396088 - 1396061 - R 89 -16.3 -3.38046 | opp_overlap 1396061 1396060, overlap 1396059 1396078 CCTGGATCTTAAAGA CGGGGCAGGCA ATCAAA CGCCTGCCCCG GTTTTTTTAACGCCG Rcas_1077 1396355 - 1396095 - | transglycosylase-associated protein TERM 1068 1396238 - 1396280 + g 73 -12.8 -3.18264 | gap 1, opp_overlap 1396237 1396236 GTCCGCCAACGAATG CGCCCAGGATGCC-GATGA TGATAT TCATCAGGCATCCCTGGCG TTCCTCGATGCCGAC TERM 1069 1397825 - 1397842 + G 71 -4.7 -4.52703 | overlap 1397816 1397826 GGCGCTCGATGCGAT TGCAGCG TTTG CGCCGCG TTTTCTGGTGCTTTC TERM 1070 1397887 - 1397908 + G 81 -10.1 -4.19506 | CGTTCGAAGGCGATC CGGTCGCCA ATCA TGGCGACAG TTTTGCGCTTAGCAT Rcas_1078 1397016 - 1398056 + | histone deacetylase superfamily protein TERM 1071 1398652 - 1398612 - g 73 -13.1 -3.19157 | CAGGAATTGTACGAA GCGCGCTGTCGCGCCTGCT ACG AACCGGCGCGCTAGGGCGC TCGCTCATGGAATAA Rcas_1079 1398063 - 1398647 + | thymidine kinase Rcas_1080 1399574 - 1398657 - | site-specific DNA-methyltransferase (adenine-specific) TERM 1072 1399397 - 1399408 + g 71 -5.8 -4.27316 | CGCGGTCGCCATCGT CGGA ACGC TCCG TTTTGAGTTGGACGC Rcas_1081 1399969 - 1401078 + | mannose-6-phosphate isomerase Rcas_1082 1401313 - 1402320 + | hypothetical protein TERM 1073 1403414 - 1403452 + T 72 -11.7 -3.39803 | ATGGCGTGGCCGTTG CGATGGCG-CAGGCGTCCG CTC CCG-CGCCAGACGCCATCG TTCTGAATGTGCCTG Rcas_1084 1405415 - 1404006 - | major facilitator transporter Rcas_1085 1405755 - 1408355 + | hypothetical protein Rcas_1086 1408624 - 1409376 + | methionine aminopeptidase, type I Rcas_1087 1410574 - 1409381 - | cell division protein FtsZ Rcas_1088 1411836 - 1410592 - | cell division protein FtsA Rcas_1089 1412681 - 1411854 - | polypeptide-transport-associated domain-containing protein Rcas_1090 1413789 - 1412674 - | D-alanine--D-alanine ligase TERM 1074 1412882 - 1412855 - G 95 -10.6 -4.46212 | gap 1, opp_overlap 1412855 1412870 1412875 CGGTTGAGCAGAAAA TCGACGCGCGCCA GCC CGGCGC-CATCGA TGGCTTTGAACGCCT Rcas_1091 1414715 - 1413828 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1075 1414070 - 1414081 + g 76 -7.2 -4.25848 | CGCTGCCGCAACTGG CGCC CCAT GGCG TTTTGCTGCGCCGTT Rcas_1092 1415996 - 1414719 - | TPR repeat-containing protein Rcas_1093 1417423 - 1415993 - | UDP-N-acetylmuramate--alanine ligase TERM 1076 1416188 - 1416216 + g 79 -13.8 -3.53091 | AATGCGCCCGGCAAG CGCGCGAGCCGC AGCGC GCGGTTCGCCCG TTTCACGCGCCGGGT TERM 1077 1416653 - 1416639 - G 74 -10 -3.74077 | CGCCAGAGATCGAAA TGGGTC ATC GACCCA TCGTAACGCACATTC Rcas_1094 1418089 - 1417442 - | hypothetical protein TERM 1078 1417728 - 1417738 + g 84 -8.2 -4.42238 | CGTTTGCCACCCCAT CCGC CAA GCGG TTTTCCTTCCCATGG Rcas_1095 1419396 - 1418086 - | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase TERM 1079 1419111 - 1419129 + gr 72 -12.4 -3.08679 | TCAAGAGATTTCGAC CTCGCAGC GCC GCTGCGGG TATTGCCTGGAACGG Rcas_1096 1420519 - 1419257 - | cell division protein FtsW Rcas_1097 1421417 - 1420572 - | rhomboid family protein Rcas_1098 1422832 - 1421414 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 1080 1421874 - 1421858 - G 86 -15.1 -3.54424 | opp_overlap 1421855 CTCGACGCCGGCAAA GGCGCGC ACA GCGCGCC GGATGTGCTCAGGAG TERM 1081 1422644 - 1422633 - G 71 -5.8 -4.26076 | TCAGCCTGACGAAAA TCGG CTTC CCGA TGCTCGCCGAGCACG Rcas_1099 1423928 - 1422837 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1082 1423034 - 1423049 + g 74 -10.4 -3.82097 | opp_overlap 1423026 1423025, overlap 1423030 TGAAAATCCGCCGTC CGACGC CGGT GCGTCG TTTGGTCCATTTGAA TERM 1083 1423888 - 1423856 - G 74 -12.8 -3.31144 | gap 1, overlap 1423860 TTGCGAGGGTCAGAA CAAAGGCGGCTGCCG CCAG CAGCAGC-GCCCTTG CCATATCCTGTACCA TERM 1084 1423872 - 1423860 - G 85 -10.5 -4.31433 | overlap 1423856 GAGGGTCAGAACAAA GGCGG CTG CCGCC AGCAGCAGCGCCCTT Rcas_1100 1425437 - 1423980 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1085 1425245 - 1425223 - G 81 -12.6 -3.72576 | overlap 1425224 CTGCGGCGCACTAAA GCGCCGCGCG CGC CACGCGCCGC CGCGTCCGCCAGAAA TERM 1086 1425249 - 1425224 - G 70 -12.5 -2.83403 | gap 1, overlap 1425223 TGCGGCGCACTAAAG CGCCGC-GCGCG CCA CGCGCCGCCGCG TCCGCCAGAAATTCG Rcas_1101 1427378 - 1425522 - | peptidoglycan glycosyltransferase Rcas_1102 1427788 - 1427390 - | hypothetical protein TERM 1087 1427559 - 1427580 + g 72 -8 -4.20918 | CGCAATTGCAGGTTG CTGCGCTC ACGCAG GAGTGCAG TTTGTTGCCGTTGCA Rcas_1103 1428739 - 1427801 - | S-adenosyl-methyltransferase MraW TERM 1088 1428353 - 1428341 - G 76 -6.2 -4.54727 | TGCCTGAAATGAAAA GCCG CGCTC CGGC GTATCCAGCTGGTAC Rcas_1104 1430378 - 1429947 - | MraZ protein TERM 1089 1430817 - 1430835 + H 72 -11.6 -3.28712 | opp_overlap 1430792, overlap 1430825 CATCCGGCATGGTCA CCCCGAGC CGC GCGCGGGG TTGTGCGCGACCCGC Rcas_1105 1431473 - 1431961 + | DNA polymerase beta subunit Rcas_1106 1431882 - 1432316 + | hypothetical protein Rcas_1107 1434892 - 1433177 - | AAA ATPase TERM 1090 1433350 - 1433336 - G 100 -11.4 -5.10029 | opp_overlap 1433347 1433347, overlap 1433345 1433348 ACGAATCTGAAAAAA CCGCTG AAA CAGCGG CGTGAGAAACTCATC Rcas_1108 1435206 - 1435000 - | hypothetical protein TERM 1091 1435386 - 1435417 + r 90 -14.5 -3.58269 | overlap 1435387 GGTGCAGTTCATGTG CGTAGGGGTGTCC ACCCAG GGACACCCCTACC TTTGCGCCTGCCTTC TERM 1092 1435387 - 1435416 + r 86 -18 -2.7464 | overlap 1435386 GTGCAGTTCATGTGC GTAGGGGTGTCC ACCCAG GGACACCCCTAC CTTTGCGCCTGCCTT Rcas_1109 1436737 - 1435571 - | acyl-CoA dehydrogenase domain-containing protein TERM 1093 1436814 - 1436825 + H 71 -5.8 -4.30719 | CGCCCGATGGGTCAG GGCA GGTC TGCC TTTGTTCTGCCCGCC TERM 1094 1437367 - 1437357 - g 76 -8.2 -4.18018 | opp_overlap 1437362 1437364 GGCGCGGATCGAAAA GGCG TTG CGCC GCGTTCCCGGCGTCA TERM 1095 1438652 - 1438687 + G 71 -11 -3.50853 | opp_overlap 1438649 1438651 1438650, overlap 1438653 1438678 TGCTCGACAAAACCG GCACGGTGACCGTCGG CAAG CCGGCGGTCACCGACA TTGTCGTTCACGCGA TERM 1096 1438653 - 1438686 + G 75 -14.5 -2.70298 | opp_overlap 1438649 1438651 1438650, overlap 1438652 1438678 GCTCGACAAAACCGG CACGGTGACCGTCGG CAAG CCGGCGGTCACCGAC ATTGTCGTTCACGCG Rcas_1110 1437043 - 1439859 + | heavy metal translocating P-type ATPase TERM 1097 1440451 - 1440412 - g 81 -15.8 -3.0464 | AACGGATTCGCAACA TCATCGCGCGCGCAGAAA CATG CTTACGCGCGCGCAATGA TCAGAGTGTAACAGA Rcas_1111 1439991 - 1440476 + | NUDIX hydrolase Rcas_1112 1440473 - 1441066 + | Holliday junction DNA helicase RuvA TERM 1098 1443250 - 1443265 + G 70 -11.8 -3.15544 | GGTGATCGCCCTTCT CGCGCC AGAT GGCGCG TTCCTGACCGTCAAC Rcas_1113 1441202 - 1444330 + | multi-sensor signal transduction histidine kinase Rcas_1114 1444327 - 1445502 + | response regulator receiver modulated serine phosphatase TERM 1099 1445960 - 1445925 - f 91 -14 -3.73775 | gap 1, opp_overlap 1445914 1445933 1445935 GTCACCCCGAGCAAA GCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGC TGCGCTCGGAATGAC TERM 1100 1446480 - 1446445 - f 91 -14 -3.73775 | gap 1, opp_overlap 1446434 1446453 1446455 GTCACCCCGAGCAAA GCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGC TGCGCTCGGAATGAC TERM 1101 1447545 - 1447573 + G 73 -13.1 -3.14211 | GTTCGCGCCTCCTCC TGACCATCGCCCG CCG CTGGCGCTGGTCA TTCCTGCCGAACCGT TERM 1102 1448777 - 1448802 + G 73 -12.6 -3.21099 | TGGTGTTGGGTCCTT CACCCTGGCA ACGCGA TGCCGGGGTG TTGATCATCGACGGC Rcas_1115 1446961 - 1449102 + | hypothetical protein TERM 1103 1450769 - 1450788 + G 74 -4.9 -4.64766 | CGCAACCTGGCGTGG GCACCAG TACAGC CTGGCGC TTTTTCCGCTCTGGA Rcas_1116 1449102 - 1451177 + | cellulose synthase (UDP-forming) TERM 1104 1451203 - 1451181 - f 95 -20.6 -2.98942 | opp_overlap 1451196 ATGGGCGGATAGACA GGGGCGGGTC TGT GACCCGCCCC CCCCAGGCGGGATAG Rcas_1117 1451898 - 1452251 + | anti-sigma-factor antagonist TERM 1105 1452453 - 1452466 + G 76 -5.9 -4.59773 | CGAGCGACCGTTACG GGTGC GGCT GCGCC TTTTTCCCGATCGCA Rcas_1118 1452241 - 1452681 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_1119 1452778 - 1453563 + | hypothetical protein Rcas_1120 1453563 - 1454258 + | hydrolase TERM 1106 1454294 - 1454270 - T 86 -12.1 -3.99494 | opp_overlap 1454266 1454291 GTAATCCAACAATAA CGCCCCCTGGA AAA TTCAGAGGGCG CTGCTCCGTTGTGCG TERM 1107 1454351 - 1454320 - T 100 -23.2 -3.67597 | opp_overlap 1454323, overlap 1454323 GTGCGTATCCAACAA CAACGTCCCTCTGG ATTT CCAGAGGGACGTTG TTCCGACGTGAGCGA TERM 1108 1454323 - 1454348 + T 100 -19.1 -3.62597 | opp_overlap 1454320 1454323 CGTATCCAACAACAA CGTCCCTCTGG ATTT CCAGAGGGACG TTGTTCCGACGTGAG TERM 1109 1454348 - 1454323 - T 100 -19.1 -3.97307 | opp_overlap 1454323, overlap 1454320 CGTATCCAACAACAA CGTCCCTCTGG ATTT CCAGAGGGACG TTGTTCCGACGTGAG Rcas_1121 1454533 - 1454375 - | Flp/Fap pilin component TERM 1110 1454646 - 1454633 - R 100 -2.3 -5.76949 | CAGTCCCAAAAAAAA GACGG TACT CCGTG AAAAATTTCTTACTG Rcas_1122 1455854 - 1454781 - | histidine kinase Rcas_1123 1456676 - 1455921 - | glycosyl transferase family protein TERM 1111 1457007 - 1457032 + G 74 -5.3 -4.54047 | overlap 1457009 CGCACGAATATGTTC GCCTGGACGGT TCCG ACCGATCAGCC TTTTGTCTACGCTGC Rcas_1124 1456767 - 1458326 + | hypothetical protein TERM 1112 1459149 - 1459168 + G 73 -3.4 -4.78753 | opp_overlap 1459148, overlap 1459150 GTCACCGCCAACCAT CCGCGACA TCAA TGGCGCGA TTTTCTTCCTGTTCG TERM 1113 1459358 - 1459335 - g 70 -13.1 -2.87132 | opp_overlap 1459313 GCTCCTGGCGACACA GGCGGCGAC GTTGTT GCCGCCGCC CTCCCCTCGCCGGTT TERM 1114 1459525 - 1459554 + G 78 -12.1 -3.74872 | opp_overlap 1459550 GCGACGCAGGCGCTT CAGGCGTTGCCGC AGCG GCCACAACGCCTG TTTCATGCAATGAGT Rcas_1125 1458337 - 1459848 + | hypothetical protein Rcas_1126 1461105 - 1459861 - | hypothetical protein TERM 1115 1460148 - 1460107 - G 71 -8.5 -3.96148 | opp_overlap 1460113, overlap 1460113 CGCCTCGATGACAAA CTGAAAGCGGATGTCGCGC CGCC GCGCGCCGACCGCTTTGCG CAGCCCGATTTCGCG TERM 1116 1460113 - 1460142 + g 76 -12.7 -3.53091 | opp_overlap 1460107 1460113 GATGACAAACTGAAA GCGGATGTCGCGC CGCC GCGCGCCGACCGC TTTGCGCAGCCCGAT TERM 1117 1460142 - 1460113 - G 76 -10.5 -3.90286 | opp_overlap 1460113, overlap 1460107 GATGACAAACTGAAA GCGGATGTCGCGC CGCC GCGCGCCGACCGC TTTGCGCAGCCCGAT Rcas_1127 1462597 - 1461662 - | riboflavin biosynthesis protein RibF Rcas_1128 1463487 - 1462594 - | tRNA pseudouridine synthase B TERM 1118 1463713 - 1463723 + r 73 -4.6 -4.62336 | CCTTTGTGTCCCTTT GTGG TTA CCGC TTTTTGCAGTGAAGT Rcas_1129 1464761 - 1463760 - | phosphoesterase domain-containing protein Rcas_1130 1465354 - 1464758 - | methyltransferase small TERM 1119 1465156 - 1465194 + g 76 -12.5 -3.53444 | gap 1, opp_overlap 1465133 1465131 1465130 GGACGATCCCGATCA CGCCGCAGCCGCATCC AAGGTCGA GGATG-GTCTGCGGCG TTTGCGGCGCAATAG Rcas_1131 1465786 - 1465394 - | ribosome-binding factor A TERM 1120 1465463 - 1465437 - G 77 -13.7 -3.29144 | gap 1, opp_overlap 1465433 1465432 TGAGGTGGCGGAGAA CCGGCGCGCTCA GCGG CG-GCGCGCCGG AGCAATTCATCGATA Rcas_1132 1467999 - 1465783 - | translation initiation factor IF-2 TERM 1121 1466101 - 1466113 + g 75 -3.3 -4.87807 | CTCCGGTTCCAGCAT GCCGA TCA TCGCC TTTTTGATATCTTCG TERM 1122 1467218 - 1467234 + g 72 -2.1 -4.67608 | overlap 1467220 GCCACGCGGGTCGAA CGGATCG CGT CGAGCAG TTTTGTCTTCCCATG Rcas_1133 1468430 - 1468116 - | hypothetical protein Rcas_1134 1469781 - 1468453 - | NusA antitermination factor TERM 1123 1469499 - 1469471 - G 70 -7.3 -4.08767 | GCGATTCGTCCAAAA TCCTTCGGCGTCG TCT CGACGACGACCGA CTCGCCCAGTTCGAC TERM 1124 1469867 - 1469843 - H 86 -13 -3.9461 | opp_overlap 1469848, overlap 1469848 CCGCGCTAACAATAA GAAAAGTGGG GGACG CCCACTTTTC GACACAACCGTGAAC TERM 1125 1469862 - 1469848 - H 88 -7.1 -5.00467 | opp_overlap 1469848, overlap 1469843 CTAACAATAAGAAAA GTGGG GGACG CCCAC TTTTCGACACAACCG TERM 1126 1470044 - 1469991 - H 100 -21.1 -3.17075 | gap 1, opp_overlap 1469991 CCGTTCTGAATGGAA CACTCGTCGCCGATGACGGCAGCG TGCCCGG CGTTGCCGTCATCGGCGCCG-GCG TGTTTGATATGCGCC TERM 1127 1469991 - 1470046 + H 100 -24.9 -3.83026 | gap 1, opp_overlap 1469991 CCGTTCTGAATGGAA CAC-TCGTCGCCGATGACGGCAGCGT GCCCG GCGTTGCCGTCATCGGCGCCGGCGTG TTTGATATGCGCCCG TERM 1128 1471103 - 1471091 - g 74 -4.7 -4.56597 | CTGGCTCTGGAAAAA CGCTC ATG GCGCG CGCGCTGATCTCGAT Rcas_1135 1470415 - 1471932 + | Mg chelatase, subunit ChlI TERM 1129 1471974 - 1471934 - T 71 -9.7 -3.84825 | gap 1 GGCAGGCAGAGTAAA TGGCAGCGGCGGCG-ATC AGCCAG GATGCGCTGCCGCCGCAA CGAGAATGAGGAAGG Rcas_1137 1474083 - 1473100 - | quinone oxidoreductase putative PIG3 Rcas_1138 1475144 - 1474080 - | ribosomal small subunit Rsm22 TERM 1130 1474705 - 1474690 - G 79 -9 -4.11216 | CTCGTATGCGCAAAA TTGCGC CCCA GCGCAA TCAACACCGGCTCGC Rcas_1139 1475304 - 1475741 + | hypothetical protein TERM 1131 1475803 - 1475792 - f 70 -4.4 -4.57569 | TCATGCTGGGAAAAA GTCA TTCG TGAC CTGTGGCACAATAAG TERM 1132 1476304 - 1476327 + F 70 -3.8 -4.58395 | ACGATTGCGCGAGAT TCGTCTGTCG GGGC TGGCATACGA TTTTTCGCGCATACC TERM 1133 1479630 - 1479643 + GF 74 -5.9 -4.48072 | TTGCGCGCCGGTCCT CTGCC CGAA GGCGG TTTTCTGCTCGATAT Rcas_1141 1478382 - 1479719 + | integral membrane sensor signal transduction histidine kinase Rcas_1142 1479694 - 1480362 + | two component LuxR family transcriptional regulator Rcas_1143 1480958 - 1480452 - | hypothetical protein TERM 1134 1480704 - 1480660 - G 76 -12.8 -3.53012 | gap 1, overlap 1480637 1480636 CGCGTGCCGCGCAAA GCGCGCTGCCGGACCCAGAGC GCGC GCTCCGGGTC-AACCCCGCGC ACCAGGATGGCATAC Rcas_1144 1481553 - 1480963 - | hypothetical protein TERM 1135 1481333 - 1481343 + g 77 -2.4 -5.09204 | AGATTGATGGCATGA TCGC ACT GCGC TTTTTGTTCGGGTGT Rcas_1145 1481812 - 1482495 + | LmbE family protein Rcas_1146 1483701 - 1482499 - | GCN5-related N-acetyltransferase TERM 1136 1482906 - 1482933 + g 81 -15.6 -3.06302 | opp_overlap 1482893 ATGTCGGCGAGTCAG GCGGCAGAGACC AGTC GATCTCTGCCGC TTCCCTGGCAATGCT Rcas_1147 1485153 - 1483858 - | peptidase M16 domain-containing protein Rcas_1148 1485289 - 1486959 + | hypothetical protein Rcas_1149 1487338 - 1487589 + | hypothetical protein Rcas_1150 1487835 - 1489880 + | glycosyl transferase family protein Rcas_1151 1490730 - 1489867 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1137 1490439 - 1490425 - G 70 -10 -3.63336 | ACAGATCAGGGGAAA GCCGAA TTT TTCGGC GAGGCGAAAGAGACG TERM 1138 1490665 - 1490697 + g 74 -9.7 -3.89346 | opp_overlap 1490645 1490648, overlap 1490683 CACATAATCGAGCGT GTGCGGACGGCGTGG ATG CCGCGCCAGTTGCAC TTTATCCCATGGAGA Rcas_1152 1491640 - 1490744 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Rcas_1153 1491857 - 1493386 + | SH3 type 3 domain-containing protein Rcas_1154 1494342 - 1493524 - | pyrroline-5-carboxylate reductase TERM 1139 1493638 - 1493586 - G 74 -11.8 -3.50393 | TCGCATCGGAGAGAA CAGTGCGCAACCCGCCGCGCTCGA GTTCG TAGAGCGCGGCGGCCGTCGTACCG CCAGGCGACGTCACC TERM 1140 1494243 - 1494262 + g 77 -4.3 -4.86731 | opp_overlap 1494243 1494244, overlap 1494244 GCTCGGTGGCGACAA TCTGATC GGCGGG GATCAGG TTTTGTTTGAGCAAG Rcas_1155 1495694 - 1494384 - | glycine hydroxymethyltransferase TERM 1141 1496137 - 1496155 + G 76 -13.8 -3.13403 | opp_overlap 1496136, overlap 1496136 ATTCTCCTGAGCAAC GCCGGCGC GGG GCGCTGGC TGTTCATCGACGAGA TERM 1142 1496335 - 1496358 + G 76 -8.1 -4.1552 | gap 1, overlap 1496309 1496333 GCGGCTGCGTACACC GCCGCGC-GC TGGGC GCTGCGTGGC TTTGTTGAAGCGCTG Rcas_1156 1495867 - 1496676 + | short-chain dehydrogenase/reductase SDR Rcas_1157 1496872 - 1497870 + | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TERM 1143 1497884 - 1497929 + F 100 -19.1 -3.71913 | opp_overlap 1497888 1497890, overlap 1497888 AGTCTCTGACGCCAC CCAACAGCGGTCATACGCCAG TCGT CCGGTGTATGGCCGCTGTTTG TGTTTTAGGTGTGAG TERM 1144 1497925 - 1497888 - f 83 -16.3 -3.06796 | opp_overlap 1497888 1497884, overlap 1497890 TCTGACGCCACCCAA CAGCGGTCATACGCCAG TCGT CCGGTGTATGGCCGCTG TTTGTGTTTTAGGTG TERM 1145 1497888 - 1497925 + F 100 -18.5 -4.46775 | opp_overlap 1497888 1497890, overlap 1497884 TCTGACGCCACCCAA CAGCGGTCATACGCCAG TCGT CCGGTGTATGGCCGCTG TTTGTGTTTTAGGTG TERM 1146 1497923 - 1497890 - f 72 -13.1 -3.09327 | opp_overlap 1497888 1497884, overlap 1497888 TGACGCCACCCAACA GCGGTCATACGCCAG TCGT CCGGTGTATGGCCGC TGTTTGTGTTTTAGG TERM 1147 1500826 - 1500801 - g 77 -2.4 -5.06816 | gap 1, opp_overlap 1500802 1500804, overlap 1500802 AGGCTTGAAGAAAAA TGCCGTCGCCG GGTAT CGGAG-CGGCG GCGTTCGTTCCGGGT Rcas_1158 1499938 - 1501149 + | glycosyl transferase family protein Rcas_1159 1503150 - 1501153 - | hypothetical protein TERM 1148 1502683 - 1502670 - G 72 -3.7 -4.65895 | overlap 1502671 1502672 TCGGGTAGCCAAAAA TGGCG AGAC CGCCG CGCCGTTCCCAGGTT Rcas_1160 1504506 - 1503436 - | myo-inositol-1-phosphate synthase Rcas_1161 1508658 - 1505758 - | hypothetical protein TERM 1149 1506141 - 1506124 - G 76 -14.1 -3.2056 | AGCGATACTGACGAA GGCGCGC GCGC GCGCGCC GGATTCGACCAGCGG TERM 1150 1506789 - 1506752 - G 81 -12 -3.84514 | overlap 1506753 ACCTGAACGATCAAA GCG-CGCGCTACCTGCGC CAGC GCGC-GGTCGCGCAACGC CGGGTTCGGCAGGAG TERM 1151 1506777 - 1506753 - G 74 -13.5 -2.90227 | overlap 1506752 CCTGAACGATCAAAG CGCGCGCTACC TGC GCCAGCGCGCG GTCGCGCAACGCCGG TERM 1152 1508840 - 1508885 + r 73 -9.8 -3.59979 | gap 3, overlap 1508841 1508846 GGCATGGTCACCCCG AGCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGCG TTTACCCTGAGCGAA TERM 1153 1508841 - 1508884 + r 73 -13.3 -2.75844 | gap 3, overlap 1508840 1508846 GCATGGTCACCCCGA GCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGC GTTTACCCTGAGCGA TERM 1154 1508846 - 1508881 + r 72 -14 -2.65354 | gap 1, overlap 1508841 1508840 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCGCGC TGCGTTTACCCTGAG Rcas_1162 1509763 - 1508990 - | beta-lactamase domain-containing protein Rcas_1163 1510131 - 1511108 + | diguanylate cyclase with PAS/PAC sensor TERM 1155 1511215 - 1511227 + G 71 -6.2 -4.36411 | opp_overlap 1511215, overlap 1511220 GCAGCGGTCAAAGCA GGCG CCCAA CGCC TTTTGGTCCTTGCTC Rcas_1164 1511096 - 1511371 + | hypothetical protein TERM 1156 1512087 - 1512110 + G 74 -9.6 -3.91798 | GTCGCAGCCGGTCTT GATCTGCTTG GCGT CGAGCAGGTC TTTGCTTCACCGTTG TERM 1157 1512264 - 1512235 - g 71 -9.3 -3.73224 | gap 1, opp_overlap 1512245, overlap 1512254 TCACTCCTGATGAAA CGCCGTTCGA-GTT GAC AACGCCGACCGGCG CGGCGATCCTGGCAG Rcas_1165 1511676 - 1512863 + | hypothetical protein Rcas_1166 1513333 - 1512926 - | PilT protein-like protein TERM 1158 1513220 - 1513196 - GT 76 -6.3 -4.51847 | opp_overlap 1513205 AAAGAACTCAGAAAA CACCTGCGTGC TGA ACACGCCAGCG TTGCTCATGGAGAGA Rcas_1167 1513556 - 1513284 - | hypothetical protein Rcas_1168 1514276 - 1514043 - | prevent-host-death family protein Rcas_1169 1514671 - 1514273 - | PilT domain-containing protein Rcas_1170 1514865 - 1514996 + | prevent-host-death family protein TERM 1159 1515099 - 1515087 - f 76 -10.5 -3.76125 | TCACCGCAAGTGAAA GCCCC GCT GGGGC TACTGATGACGATGC TERM 1160 1515369 - 1515391 + G 85 -14.2 -3.54543 | opp_overlap 1515365 CTCAAACAGACCTAT GCGTTCGACT ATG AGTCGAGCGC TTTCACGCGATCGCT Rcas_1171 1515339 - 1516283 + | DNA methylase N-4/N-6 domain-containing protein Rcas_1172 1517809 - 1516937 - | binding-protein-dependent transport systems inner membrane component Rcas_1173 1518798 - 1517806 - | binding-protein-dependent transport systems inner membrane component TERM 1161 1518859 - 1518830 - R 76 -13.7 -3.10053 | opp_overlap 1518820 ATAGACGTGAAGAGA GGTTGAGACGTAG CATG CTACGTCTCAACA ACGTCCCTCCGTATG Rcas_1174 1520263 - 1518896 - | extracellular solute-binding protein Rcas_1175 1521785 - 1520706 - | integral membrane sensor signal transduction histidine kinase Rcas_1176 1522479 - 1521790 - | two component transcriptional regulator Rcas_1177 1522985 - 1522476 - | alkylhydroperoxidase TERM 1162 1522885 - 1522835 - G 70 -11.7 -3.16881 | gap 1 GATTGACGGCAGTAA CGGCGAGCATCAGGCGCTCG-CGG AATG CCGGCGAGAGCATGGTGCGCGCCT GCCGCAACCGGGTGC Rcas_1178 1523649 - 1523089 - | methyltransferase type 11 Rcas_1179 1523782 - 1524777 + | radical SAM domain-containing protein Rcas_1180 1524913 - 1525083 + | hypothetical protein Rcas_1181 1525107 - 1525811 + | ABC transporter related Rcas_1182 1525820 - 1526815 + | SufBD protein Rcas_1183 1528784 - 1527027 - | sulfate transporter TERM 1163 1528762 - 1528729 - G 76 -6.6 -4.39571 | opp_overlap 1528732, overlap 1528732 TCGAGAAACGGAAAA TAACGCCGGAGACC CTGACC GGTCAGCGGCGTTT TAAGCGACGAAGAGA TERM 1164 1528732 - 1528759 + g 73 -8.3 -4.07568 | opp_overlap 1528729 1528732 AGAAACGGAAAATAA CGCCGGAGACC CTGACC GGTCAGCGGCG TTTTAAGCGACGAAG TERM 1165 1528759 - 1528732 - G 79 -8.3 -4.30043 | opp_overlap 1528732, overlap 1528729 AGAAACGGAAAATAA CGCCGGAGACC CTGACC GGTCAGCGGCG TTTTAAGCGACGAAG Rcas_1184 1529302 - 1528805 - | hypothetical protein Rcas_1185 1529899 - 1529321 - | hypothetical protein Rcas_1186 1530557 - 1530306 - | SirA family protein Rcas_1187 1531937 - 1530756 - | beta-lactamase domain-containing protein TERM 1166 1531991 - 1531969 - H 71 -7.8 -4.06419 | GCTGTTCACAAAGAA TCCAGAGATA GTG TATGTCTGGA GTGTAAGGCGCGTAC Rcas_1188 1532934 - 1533989 + | hypothetical protein Rcas_1189 1534915 - 1534178 - | ribonuclease H TERM 1167 1535302 - 1535268 - R 73 -13.5 -2.70932 | gap 1 CCGGTCTCGCAATGA CTGC-GCCCCCCGGCG CGCC CACCGGGGGACGGCCG CGCGCGCGGCGCCGG Rcas_1190 1536522 - 1535452 - | oxidoreductase domain-containing protein TERM 1168 1536158 - 1536174 + g 83 -7.9 -4.56597 | overlap 1536150 TTGCTCATGTTGATT GCCAGCA CTT TGCCGGC TTTTTCGGCAGCAGC Rcas_1191 1536810 - 1536652 - | hypothetical protein TERM 1169 1537395 - 1537415 + G 72 -2.3 -4.70169 | overlap 1537409 CAGCCAGCCCATTGG CGCACTGCG CGC CGCCGAACG TTTTGTTCGATCTGA Rcas_1192 1536916 - 1538418 + | Ppx/GppA phosphatase Rcas_1193 1541028 - 1538608 - | cell divisionFtsK/SpoIIIE Rcas_1194 1543066 - 1543416 + | anti-sigma-factor antagonist Rcas_1195 1543595 - 1544404 + | anti-sigma-factor antagonist TERM 1170 1544441 - 1544467 + G 82 -14.5 -3.28712 | TGTATTGCCTGGTTG TGGGGGCAGTC GGCTG GACTGCCCTCA TTCTCAGCAGCCCCG TERM 1171 1544774 - 1544820 + G 73 -12.8 -3.19157 | overlap 1544770 1544806 TGCTGGCAGGTGGCG CGCTGGCGCGTCTTCTGGCCGA TGG TCCGCCTGGAGGAGCGCTCGCG TTGATGGCGTTCATC TERM 1172 1544998 - 1545014 + G 72 -2.1 -4.78848 | overlap 1545000 GCCGCCATTTATACG CGCCTGG GGT CCGGGTA TTTTGTGTTTGCCGC Rcas_1196 1544401 - 1547415 + | protein serine phosphatase with GAF(s) sensor(s) Rcas_1197 1547478 - 1547987 + | PHA accumulation regulator DNA-binding protein Rcas_1198 1548155 - 1549339 + | patatin Rcas_1199 1550402 - 1549662 - | hypothetical protein TERM 1173 1549747 - 1549737 - G 71 -5.4 -4.41895 | AACGGCGAAGGAAAA CCAT TGA ATGG CATACCCCAGATGCG TERM 1174 1549919 - 1549940 + g 83 -9.3 -4.25104 | overlap 1549921 1549922 1549925 1549928 CATCGAGGCGCGGTC GTTCCGCCG TGAG CGGCGGGTC TTTTGGTCCGCCGGC TERM 1175 1549921 - 1549938 + g 74 -10.5 -3.73042 | overlap 1549919 1549922 1549925 1549928 TCGAGGCGCGGTCGT TCCGCCG TGAG CGGCGGG TCTTTTGGTCCGCCG Rcas_1200 1552893 - 1550416 - | ATPase TERM 1176 1552202 - 1552244 + g 76 -9 -4.07568 | opp_overlap 1552174, overlap 1552202 1552203 1552232 1552233 AGCGGTAGCGGCACA TCGCCGCTGGCGATGCGTTG CGC CAACCCTTCGGCAATGGCGG TTTTGCCAACGCCGG TERM 1177 1553167 - 1553144 - H 90 -15.2 -3.70511 | overlap 1553145 AATATCAGGGAACAA TCGGCGGCGC CACG GCGCCGCCGT GATCCGCTGAGGACG TERM 1178 1553166 - 1553145 - H 86 -18.7 -2.81584 | overlap 1553144 ATATCAGGGAACAAT CGGCGGCGC CACG GCGCCGCCG TGATCCGCTGAGGAC Rcas_1201 1553794 - 1554249 + | hypothetical protein TERM 1179 1554295 - 1554267 - T 79 -8.9 -4.27886 | gap 1, opp_overlap 1554267, overlap 1554263 GCGTAAACATACAAA GGCGACG-CTCC TTCGCC AGAGTCGTCGCC TTGGATTACACGTCT Rcas_1202 1555082 - 1554321 - | hypothetical protein TERM 1180 1555330 - 1555285 - R 73 -9.8 -3.59979 | gap 3, overlap 1555286 1555289 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 1181 1555329 - 1555286 - R 73 -13.3 -2.75844 | gap 3, overlap 1555285 1555289 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 1182 1555324 - 1555289 - R 72 -14 -2.65354 | gap 1, overlap 1555286 1555285 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_1203 1557513 - 1555648 - | RND family efflux transporter MFP subunit TERM 1183 1556177 - 1556159 - G 81 -3.8 -4.99638 | opp_overlap 1556170, overlap 1556160 ACATCGACATAAAAA CGCTCG AGATTGG CGAGCA CAATCGCAGGACGTC Rcas_1204 1558484 - 1557522 - | ferrochelatase TERM 1184 1558650 - 1558672 + r 79 -14.8 -2.97934 | opp_overlap 1558637 1558638, overlap 1558645 AACGCGGCTGGCAAT GCGCCGTAGC ATA GCCACGGCGC TGCTTTGATCGCTCT Rcas_1205 1560560 - 1558695 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Rcas_1206 1560972 - 1560610 - | hypothetical protein Rcas_1207 1561513 - 1561196 - | DNA polymerase beta subunit TERM 1185 1561424 - 1561438 + g 78 -7.1 -4.61231 | TCCACGCGCGCGAGA GCCGT AGAGC ACGGC TTTTTGCACCTGTGG Rcas_1208 1561932 - 1561510 - | HI0074 family nucleotidyltransferase substrate binding protein TERM 1186 1563453 - 1563470 + G 73 -6.9 -4.32857 | overlap 1563446 1563445 1563454 CAGCGATCCGGCGAG TGCGCCG TGTT TGGCGCG TTTCTGTTTCGCCAA Rcas_1209 1562359 - 1563546 + | aminotransferase class I and II Rcas_1210 1563647 - 1564837 + | monogalactosyldiacylglycerol synthase TERM 1187 1564882 - 1564855 - T 79 -15.6 -2.75975 | opp_overlap 1564854 1564863, overlap 1564852 1564848 GCTGAATAGACATCA GGGGGAGATGGC AAGC GCCATCTTCCCC CCTGGTATCGCAGTG TERM 1188 1564891 - 1564931 + T 88 -19.1 -2.78463 | opp_overlap 1564917 CTTCCCCCCTGGTAT CGCAGTGTTGAGTCGTTGC AGA GCAACGGCTCAACACCGCC TCTCATGAAGCCCCT Rcas_1211 1566579 - 1564948 - | chaperonin GroEL Rcas_1212 1566945 - 1566640 - | chaperonin Cpn10 TERM 1189 1567028 - 1566981 - H 75 -13.7 -2.88249 | gap 1, opp_overlap 1566987, overlap 1567009 TACAGTGTGCAGAGA CTTGA-AGCGGTTAGCACTCTT GACCA AAGAGTGCTAACCGCTCTCTAT ACTAACGAAATCGGC TERM 1190 1566987 - 1567021 + H 100 -21.7 -3.02471 | opp_overlap 1566981 1567009 GTGCAGAGACTTGAA GCGGTTAGCACTCTT GACCA AAGAGTGCTAACCGC TCTCTATACTAACGA Rcas_1213 1567225 - 1568214 + | fructose 1,6-bisphosphatase II Rcas_1214 1569299 - 1568232 - | glucose-1-phosphate thymidyltransferase TERM 1191 1569435 - 1569401 - R 78 -13.5 -3.15996 | overlap 1569399 1569403 1569407 GATCACTCATCAACA CACAGACGCCCGTGC ACCTG GCACGGGCGTTGGCG ACGACCATGGCAACG TERM 1192 1569432 - 1569403 - R 82 -14.4 -3.13867 | gap 1, overlap 1569399 1569401 1569407 TCACTCATCAACACA CAGACGCCCGTGC ACCTG GCACGGGCGT-TG GCGACGACCATGGCA TERM 1193 1569429 - 1569407 - R 83 -16.3 -3.11951 | overlap 1569403 1569399 1569401 TCATCAACACACAGA CGCCCGTGC ACCTG GCACGGGCG TTGGCGACGACCATG Rcas_1215 1571053 - 1569455 - | NLP/P60 protein TERM 1194 1569873 - 1569858 - G 75 -11.8 -3.57615 | overlap 1569859 GGAATATTCGCCAAA CCGGCG CTCG CGCCGG GGCGACCGCCGCTCA Rcas_1216 1572022 - 1571309 - | glycerophosphodiester phosphodiesterase TERM 1195 1572071 - 1572048 - R 100 -19.6 -4.77165 | CTCCTGACAACAAAA TCCCCGCCCC GAGC GGGGCGGGGA GCAGCGGTAGCGACC Rcas_1217 1572634 - 1572092 - | zinc finger SWIM domain-containing protein TERM 1196 1572583 - 1572601 + g 72 -2.2 -4.74706 | opp_overlap 1572546, overlap 1572584 CGATGCGCTCCGGTT CCTCCGCG TAA CGCCGGGC TTTTTCGATCTTCCC TERM 1197 1572748 - 1572709 - R 100 -13 -4.82901 | gap 1, opp_overlap 1572708 1572706, overlap 1572710 GCCTTTGGATAAAAA CTGAAGCGGCACAGA-TTG ATA CACCTCTGTGCCGCTTCAC GCTGTTCCGTATTCA TERM 1198 1572747 - 1572710 - R 93 -16.5 -3.49419 | gap 1, opp_overlap 1572708 1572706, overlap 1572709 CCTTTGGATAAAAAC TGAAGCGGCACAGA-TTG ATA CACCTCTGTGCCGCTTCA CGCTGTTCCGTATTC Rcas_1218 1574610 - 1573264 - | phosphomannomutase TERM 1199 1575046 - 1575088 + r 88 -13.5 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCTCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_1219 1577526 - 1575211 - | (p)ppGpp synthetase I, SpoT/RelA Rcas_1220 1578862 - 1577621 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1200 1578802 - 1578747 - G 73 -8.1 -4.07687 | gap 1, overlap 1578748 1578796 ATTGGCGGCGCAAAA TCGGCGACTGTGGGGCGCTGCCGCGC GCGCA GTTCGGCAG-GCGCCACAAGCGCCAG CGTCGTCAGCGCCAC TERM 1201 1579074 - 1579056 - RH 74 -6.1 -4.56597 | CTTGTCTTGCAAAAA GTAAACA TATCT TGTTTAC TTCAGAAACGTCTGA TERM 1202 1579076 - 1579089 + rH 71 -5.3 -4.37886 | CATATCTTGTTTACT TCAGA AACG TCTGA TTTTCTGGAGAATGC TERM 1203 1579684 - 1579649 - gR 81 -14 -3.3452 | opp_overlap 1579647, overlap 1579638 CAGAGCATTGCAGAA GCGGAGCGCCGCTATG CCTT CATAAGGGCGCTCCCC GTTACGCTGGCATGG Rcas_1222 1581395 - 1579902 - | aldehyde dehydrogenase Rcas_1221 1579478 - 1579972 + | PilT domain-containing protein Rcas_1223 1581662 - 1582540 + | methyltransferase type 12 Rcas_1224 1583795 - 1582596 - | acetylornithine and succinylornithine aminotransferase Rcas_1225 1583941 - 1584282 + | hypothetical protein Rcas_1226 1586153 - 1584336 - | 5'-nucleotidase domain-containing protein TERM 1204 1584467 - 1584493 + g 70 -10.1 -3.59979 | gap 1, opp_overlap 1584450 1584448 1584447 1584462, overlap 1584468 CGGGCAACGACTCGC CGCCGGTGCGCG GCAA CGC-CACCGGCA TTTCGGCTGGCGCCG TERM 1205 1584468 - 1584492 + g 72 -13.6 -2.75844 | gap 1, opp_overlap 1584450 1584448 1584447 1584462, overlap 1584467 GGGCAACGACTCGCC GCCGGTGCGCG GCAA CGC-CACCGGC ATTTCGGCTGGCGCC TERM 1206 1586281 - 1586250 - H 82 -14.6 -3.26471 | opp_overlap 1586257, overlap 1586251 1586257 TGACGTGCAGAGGAA TCAAAAAGGCTCAC GACT GTGAGCCTTTTTGC CGCCGTGATTGGCGG TERM 1207 1586280 - 1586251 - H 85 -18.1 -2.55668 | opp_overlap 1586257, overlap 1586250 1586257 GACGTGCAGAGGAAT CAAAAAGGCTCAC GACT GTGAGCCTTTTTG CCGCCGTGATTGGCG TERM 1208 1586274 - 1586257 - H 100 -11.3 -4.91873 | opp_overlap 1586257, overlap 1586251 1586250 CAGAGGAATCAAAAA GGCTCAC GACT GTGAGCC TTTTTGCCGCCGTGA TERM 1209 1586257 - 1586274 + H 95 -11.3 -4.57569 | opp_overlap 1586257 1586251 1586250 CAGAGGAATCAAAAA GGCTCAC GACT GTGAGCC TTTTTGCCGCCGTGA Rcas_1227 1586602 - 1587204 + | hypothetical protein Rcas_1228 1587895 - 1587281 - | LuxR family transcriptional regulator Rcas_1229 1588788 - 1587892 - | peptidase S1 and S6 chymotrypsin/Hap Rcas_1230 1589700 - 1588789 - | PDZ/DHR/GLGF domain-containing protein Rcas_1231 1589940 - 1590914 + | Acetyl xylan esterase Rcas_1232 1592765 - 1591698 - | ABC transporter related TERM 1210 1592305 - 1592325 + g 74 -12.5 -3.38812 | overlap 1592313 GGATCGGGCGCCAGG GCGCGTGCC AGC GCCACGCGC TGTTGTTGCCCGCCC TERM 1211 1592313 - 1592327 + g 73 -11.4 -3.61398 | overlap 1592305 CGCCAGGGCGCGTGC CAGCGC CAC GCGCTG TTGTTGCCCGCCCGA Rcas_1233 1594362 - 1592815 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 1212 1594653 - 1594675 + G 84 -8.3 -4.42386 | opp_overlap 1594648 1594655, overlap 1594655 AGTGCCGAAACCAGA GACTGGCGC CGATC GCGCCGGGC TTTTCTGCGTGCAGC TERM 1213 1594694 - 1594713 + G 73 -10.7 -3.63073 | TCTGCGTGCAGCGGT TGGCGCC GGTGCA GGCGCCA TTCTTGCCGCCTGTG TERM 1214 1594803 - 1594759 - g 89 -17.1 -3.14344 | CAGCCCCGGCAGCAA CGACCGCTCCGGCTGCGACCA CGG CGCCCGCAGCCGAAGCAACCG CACCTGCCCAACTCC TERM 1215 1595133 - 1595121 - g 74 -5.5 -4.45117 | overlap 1595126 GATACGGCAAAGAAA GAAGG TCT CCTCC AACCTTACAAGGTTG Rcas_1234 1594635 - 1595879 + | ABC-type Fe3+ transport system periplasmic component-like protein Rcas_1235 1596285 - 1597181 + | binding-protein-dependent transport systems inner membrane component TERM 1216 1597219 - 1597231 + G 74 -9.1 -3.84183 | overlap 1597218 CTGGTTCTGGTTCAT CGTCG GCG CGACG TATTTTCTCGTGCCG TERM 1217 1597268 - 1597290 + G 74 -9.1 -3.85909 | GCCACGTTCGATTTC TCGCTGCGC GCCCG GCGCGGTGA TTTAAGTTTCGCTGC Rcas_1236 1597184 - 1597963 + | binding-protein-dependent transport systems inner membrane component Rcas_1237 1597974 - 1599086 + | spermidine/putrescine ABC transporter ATPase subunit Rcas_1238 1600468 - 1599050 - | phytoene dehydrogenase and related protein-like protein Rcas_1239 1600628 - 1601572 + | anti-sigma-factor antagonist Rcas_1240 1603739 - 1601586 - | parallel beta-helix repeat-containing protein TERM 1218 1602107 - 1602097 - G 73 -6.8 -4.26076 | opp_overlap 1602106, overlap 1602098 CGATGGGCATCAAAA CCGT CCC ACGG CGCCGCTATCGCCTG TERM 1219 1603718 - 1603703 - G 77 -4 -4.84359 | gap 1, opp_overlap 1603689 1603715, overlap 1603717 TGAGCGTCAGAAAAA CGTTCGT TAT ACGA-CG CGCGAAAGATGGGCG Rcas_1241 1603981 - 1605345 + | isocitrate dehydrogenase, NADP-dependent Rcas_1242 1606185 - 1605544 - | signal-transduction protein Rcas_1243 1606675 - 1606274 - | globin Rcas_1244 1607460 - 1606672 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 1220 1607596 - 1607631 + r 72 -14 -2.65354 | gap 1, overlap 1607594 1607593 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCTC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_1245 1608815 - 1607754 - | HEAT repeat-containing PBS lyase TERM 1221 1608162 - 1608138 - G 71 -11.3 -3.53012 | opp_overlap 1608129, overlap 1608100 GCGCGCCGCTGCAAA GCGTGTCTCCG CAT CGGAGTCGCGC AGCGCAACGTCTAGC TERM 1222 1609310 - 1609295 - R 100 -11.8 -5.60993 | opp_overlap 1609293 1609303 CTTCCCACAAAAAAA CGCGGC ATAC GCCGCG CGGTTGTACGATATG TERM 1223 1609915 - 1609962 + r 86 -18 -2.92463 | opp_overlap 1609919, overlap 1609919 TTTTTGTTTTCACCA CCAAGACACAAAGGCACGAAGG TTAT TTTTAGTGTCTTTGTGTCTTGG TGTCTCCGTGGTGCA TERM 1224 1609919 - 1609958 + r 72 -11.6 -3.32993 | opp_overlap 1609919, overlap 1609915 TGTTTTCACCACCAA GACACAAAGGCACGAAGG TTAT TTTTAGTGTCTTTGTGTC TTGGTGTCTCCGTGG Rcas_1246 1610761 - 1610369 - | hypothetical protein TERM 1225 1610785 - 1610824 + H 74 -12.4 -3.17051 | opp_overlap 1610791, overlap 1610791 1610791 CCTTGCTTGTTTTAC CACCAAGATACCAAGA CGCAAAGA TTTTGGTGTCTTGGTG TCTTAGTGGTGAAAG Rcas_1247 1611479 - 1613590 + | glycoside hydrolase family 13 protein Rcas_1248 1614805 - 1614239 - | NUDIX hydrolase TERM 1226 1615010 - 1614977 - R 100 -8.9 -5.00616 | gap 1, opp_overlap 1614984, overlap 1614978 1614979 CGGCGCGCGAAAAAA CTGTTCACTATCGGCG CCG CGCCGATAGTGTAT-G CAAGGAGGCATACTG TERM 1227 1614984 - 1615004 + r 81 -15.5 -2.87132 | opp_overlap 1614979 1614977 1614978 CGAAAAAACTGTTCA CTATCGGCG CCG CGCCGATAG TGTATGCAAGGAGGC Rcas_1249 1615351 - 1615082 - | hypothetical protein Rcas_1250 1617383 - 1615551 - | ABC transporter related Rcas_1251 1619538 - 1617715 - | cyclic nucleotide-binding protein TERM 1228 1619590 - 1619564 - R 90 -14.4 -3.452 | opp_overlap 1619582 TCCAAAGATTCATAA GCGTCGCCGGAT GTC ACCCTGCGACGC AGTTCAGTAAGTATA Rcas_1252 1620949 - 1619834 - | hypothetical protein TERM 1229 1620497 - 1620459 - G 71 -11.5 -3.53012 | GGCTCGTTCTCGAAA GCGGCGAACGACGGCGC CGAAT GCTCCGGCGTGAGCCGC AGGGATCGGAGCAAT TERM 1230 1620800 - 1620770 - G 77 -12.5 -3.53811 | overlap 1620771 TCCAGCGCCGCCAAA TGCCACCGGTGCG GGAGG CGCATCGGTGGCG AGCGCAAAACCGTCG TERM 1231 1620799 - 1620771 - G 81 -16 -2.72144 | overlap 1620770 CCAGCGCCGCCAAAT GCCACCGGTGCG GGAGG CGCATCGGTGGC GAGCGCAAAACCGTC Rcas_1253 1621799 - 1621032 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 1232 1621800 - 1621781 - G 73 -2.9 -4.8048 | gap 1, overlap 1621784 CGTCGAGACGAAAAA GATCGAGC GCGCT GCTC-ATC GTGATCGCTCCGCCT Rcas_1254 1622626 - 1621796 - | myo-inositol catabolism IolB domain-containing protein TERM 1233 1622528 - 1622476 - G 78 -7.1 -4.56597 | gap 3, overlap 1622517 CGCGTCCGCCAAAAA TGACGAGCGCCACTTCACGTCCGCCG GTCT CACCGG-CG-AAACTGGCGC-CGTCA GGAAGGATAAGCCGG TERM 1234 1622745 - 1622715 - R 72 -12.7 -2.99834 | gap 1, opp_overlap 1622709, overlap 1622708 1622703 AAACTATATCACAGA GTGCAG-CGCCATC TTTC GATAGCGTCTGCAC AGTGTGTTGATGGGT Rcas_1255 1624604 - 1623081 - | hypothetical protein TERM 1235 1624630 - 1624616 - R 78 -4.2 -4.72846 | TCATAGACGCAAAAA CCGG CTACCTC CCGG TCAACCCATGGCGAG Rcas_1256 1625366 - 1624620 - | xanthine and Co dehydrogenase maturation factor Rcas_1257 1625842 - 1625528 - | hypothetical protein Rcas_1258 1627965 - 1625866 - | polysaccharide deacetylase TERM 1236 1627329 - 1627305 - G 71 -11.4 -3.40403 | opp_overlap 1627309 1627310 CGGGCGTCAGCACAA CACGCGCCGC CAGGT GCAGCACGTG GGGCATTTCTTCCAC TERM 1237 1629609 - 1629625 + r 86 -15.1 -3.39505 | GAGGTGGGGATGCGG GCGCGCC AGC GGCGCGC TTCTACCTGTCGCCT Rcas_1259 1631055 - 1629682 - | glycosyl transferase group 1 Rcas_1260 1632184 - 1631066 - | oxidoreductase domain-containing protein TERM 1238 1631844 - 1631866 + g 83 -7.6 -4.56597 | overlap 1631845 ACAATGCGCGCCGAT TCGTCTGGCG TTG CGCCAAGCGG TTTTTCGCAGAAGAG Rcas_1261 1632665 - 1632189 - | hypothetical protein Rcas_1262 1633360 - 1632662 - | methyltransferase type 11 Rcas_1263 1634441 - 1633431 - | cell shape determining protein MreB TERM 1239 1634531 - 1634479 - R 76 -10.1 -3.78775 | gap 2 GCCCTCAGCATGAAA TATCGCAGGG-TCAAGA-GCAGCAT TCATG ATACTGCATCCCGCGCCCTGCGATA GCGACTCATAGGGAG TERM 1240 1634602 - 1634583 - R 72 -13.6 -2.52464 | opp_overlap 1634588 GTTTGTTTCAATCCA CGCCTTCC GGGG GGAAGGCG ACCGCTAATCGCGCT TERM 1241 1634588 - 1634626 + r 73 -4.4 -4.65916 | opp_overlap 1634583 TTTCAATCCACGCCT TCCGGGGGGAAGGCGA CCGCTAA TCGCGCTCACGCCGGA TTTTCTTCAACTGCG Rcas_1264 1635026 - 1634607 - | ATP synthase F1, epsilon subunit Rcas_1265 1636448 - 1635033 - | F0F1 ATP synthase subunit beta Rcas_1266 1637348 - 1636476 - | ATP synthase F1, gamma subunit Rcas_1267 1639141 - 1637561 - | ATP synthase F1, alpha subunit TERM 1242 1638896 - 1638908 + g 74 -9.1 -3.92577 | opp_overlap 1638895 1638896, overlap 1638894 ATCACCAAGAATAAT TGCGG AAA CCGCA TCTTTTTCCAGGTTG Rcas_1268 1639660 - 1639184 - | H+transporting two-sector ATPase delta (OSCP) subunit TERM 1243 1639473 - 1639440 - G 73 -8.7 -4.08767 | opp_overlap 1639439 1639466 GTCATCTGCTCAAAA GCAGCCACGACGGCC GGCA GGCGATCGAGGTTGC CCTCTTTGCCAAGCG TERM 1244 1639514 - 1639551 + g 84 -15.6 -3.32963 | GTTGCGCACCTCACG CGGAGCATCTGCTGGC AGCGCC GCCAACAGACGCTCCG TTGTCACCTCGCCAT Rcas_1269 1640204 - 1639713 - | ATP synthase F0, B subunit Rcas_1270 1640469 - 1640236 - | ATP synthase F0, C subunit Rcas_1271 1641555 - 1640560 - | ATP synthase F0, A subunit TERM 1245 1641642 - 1641619 - R 100 -9 -4.88736 | gap 1 TATCAGGCATAAAAA TTCAACCTGCG AAA CG-AGGTTGAA CGGGCGCTGCGCGTA Rcas_1272 1642692 - 1641724 - | response regulator receiver protein TERM 1246 1641905 - 1641923 + g 79 -11 -3.86346 | GCCGACGACTCGGTC TCGCGCAG CAT CTGCGTGA TTTGTCCCGCCGTCG TERM 1247 1642225 - 1642250 + g 70 -7.5 -4.05788 | gap 1 TCGTGCAGGGCGCGT CGGCGG-TGCGG ATG CTGCAACCGGCG TTTCCTTTGGCGGCG TERM 1248 1642429 - 1642415 - G 79 -8.5 -4.34402 | overlap 1642417 TGCTGCACACCAAAA CCGGC CACCC GCCGG GCGATCTGCGGATCG Rcas_1273 1644385 - 1642715 - | multi-sensor signal transduction histidine kinase TERM 1249 1644051 - 1644039 - G 71 -4.7 -4.52589 | overlap 1644040 1644041 GGTTTTGAGAGAAAA TCGGC GAC GCCGC GCCGTACCGACTGAT Rcas_1274 1645547 - 1644402 - | hypothetical protein Rcas_1275 1646277 - 1646786 + | phage shock protein C, PspC Rcas_1276 1647322 - 1646804 - | hypothetical protein TERM 1250 1647983 - 1648000 + G 74 -9.1 -3.85254 | gap 1, overlap 1647947 1647981 TCTGGTCTGGCAGAC GCCGCCGC AGT GCG-CGGC TATTTTCTGCTCCTG Rcas_1277 1647722 - 1648756 + | LacI family transcription regulator Rcas_1278 1648778 - 1649881 + | ABC transporter related Rcas_1279 1649905 - 1650288 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Rcas_1280 1652061 - 1650439 - | hypothetical protein TERM 1251 1652918 - 1652876 - H 73 -10.6 -3.59979 | gap 2 TTCGCTCAGGGTAAA CGCAGCGAGGAATCTGAGCG GGTCG CGCGC-GACCCCTCGC-GCG GCTCGGGGTGACCAT TERM 1252 1653650 - 1653606 - g 74 -5 -4.62783 | gap 2 GATCCACCGGAAAAA CTGCGCAGCGGCGGCGTACAGA TTA TCTGGA-GCTA-CACCGCGCAG GCAAGCGGTGGCGTT Rcas_1281 1653090 - 1654382 + | hypothetical protein TERM 1253 1654912 - 1654935 + F 89 -11.7 -4.16182 | opp_overlap 1654912 CCTTCTCCTGGAAAA GCGCGCGGT TGCCGC ATCGCGCGC TTTCATTTATAATAG TERM 1254 1654935 - 1654912 - f 76 -9.5 -4.07568 | opp_overlap 1654912 CCTTCTCCTGGAAAA GCGCGCGGT TGCCGC ATCGCGCGC TTTCATTTATAATAG TERM 1255 1655288 - 1655308 + G 91 -4.7 -5.32882 | gap 1, overlap 1655289 GTGCGCGGGTGTATT G-CGCCGA GTCTGG TCGGCGTC TTTTTTGTGGTGCTG TERM 1256 1655289 - 1655306 + G 79 -8.4 -4.29153 | overlap 1655288 TGCGCGGGTGTATTG CGCCGA GTCTGG TCGGCG TCTTTTTTGTGGTGC TERM 1257 1655630 - 1655616 - g 71 -5.7 -4.34402 | opp_overlap 1655616 1655614 GGCTGGAGATCAAAA CCGAT GGTGA ATCGG TCTTTCGGCGGGTGC Rcas_1282 1654958 - 1655797 + | XRE family transcriptional regulator Rcas_1283 1655812 - 1656309 + | hypothetical protein TERM 1258 1656767 - 1656806 + G 72 -13.6 -2.7317 | overlap 1656765 TGCCAGGCGCCTACG CCGACTGGCGC-ACGGCG CCGATC CGCCGCCGCGCC-GTCGG TCCTTCGGCATATCT Rcas_1284 1656310 - 1657758 + | MiaB-like tRNA modifying enzyme YliG Rcas_1285 1658214 - 1657795 - | CopY family transcriptional regulator Rcas_1286 1658391 - 1659407 + | polyprenyl synthetase TERM 1259 1659722 - 1659738 + T 70 -4.3 -4.56597 | overlap 1659713 1659718 CCGCATGGGGCGCAG GGTGGGG CGT CTCTGCC TTTTTCCCCACAGGC TERM 1260 1659802 - 1659853 + T 70 -10 -3.524 | TGACAGTCGTCACCA GGTCCAGCCACGACGCTGCATATG ATCC TATATGCGGCGCCGCTGCTGGCGC TTGTGTCGGTGCATC Rcas_1287 1660696 - 1659779 - | hypothetical protein TERM 1261 1660130 - 1660101 - G 93 -18.6 -3.15999 | GGTGCAGACATCGAA GGCGGCGGTGCG ACGACA CGCACCGCCACC CGCTCTGACGCAGCG Rcas_1288 1660803 - 1661960 + | glycosyl transferase group 1 Rcas_1289 1662547 - 1662200 - | putative transposase, orfB Rcas_1290 1664377 - 1662944 - | EmrB/QacA family drug resistance transporter TERM 1262 1663908 - 1663894 - G 72 -4.2 -4.61868 | TATTGACATAGAAAA TCGCCT GCC AGCCGA CCGCGCTGATCAGCG Rcas_1291 1665740 - 1664391 - | GTP-binding protein Era Rcas_1292 1666234 - 1665824 - | hypothetical protein TERM 1263 1666188 - 1666164 - G 80 -5.7 -4.70659 | opp_overlap 1666166, overlap 1666166 TCCCAGACTGAAAAA TATTCCCAGTT AGA ATCTGGGAATT TCCTCTCCGGAGGAT TERM 1264 1666166 - 1666186 + g 71 -8.3 -3.83026 | opp_overlap 1666164 1666166 CCAGACTGAAAAATA TTCCCAGTT AGA ATCTGGGAA TTTCCTCTCCGGAGG TERM 1265 1666186 - 1666166 - G 73 -8.3 -3.96999 | opp_overlap 1666166, overlap 1666164 CCAGACTGAAAAATA TTCCCAGTT AGA ATCTGGGAA TTTCCTCTCCGGAGG Rcas_1293 1667365 - 1666295 - | DNA methylase N-4/N-6 domain-containing protein Rcas_1294 1668355 - 1667462 - | hypothetical protein Rcas_1295 1669088 - 1668372 - | ubiquinone/menaquinone biosynthesis methyltransferase Rcas_1296 1669852 - 1669085 - | Baf family transcriptional activator Rcas_1297 1670829 - 1669867 - | asparaginase/glutaminase TERM 1266 1670391 - 1670379 - G 75 -4.1 -4.72986 | CAGCCGCAGCAAAAA TCTGC CCG GCAAA CACGACAAGCACGCC Rcas_1298 1671645 - 1670836 - | methyltransferase type 11 TERM 1267 1671804 - 1671846 + r 90 -14.9 -3.59979 | ATGGTCATCCCGAGC CGC-GCGAGGGGTCGTGCGCG TCC CGCGCA-GATTCCGCGCTGCG TTTACCCTGAGCGAA TERM 1268 1672075 - 1672117 + r 88 -13.5 -3.62096 | overlap 1672076 1672078 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGATCGAA TERM 1269 1672076 - 1672116 + r 84 -17 -2.77043 | overlap 1672075 1672078 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGATCGA TERM 1270 1672078 - 1672113 + r 85 -18.4 -2.65532 | gap 1, overlap 1672076 1672075 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAT Rcas_1299 1673239 - 1672259 - | oxidoreductase domain-containing protein TERM 1271 1673327 - 1673305 - R 88 -13.4 -3.68988 | opp_overlap 1673300, overlap 1673306 CTCCAGCGAAGATAA TGCGGAGGTC ACA GACCTCCGCG TGCGATGTTCGGACA TERM 1272 1673326 - 1673306 - R 84 -16.9 -2.81072 | opp_overlap 1673300, overlap 1673305 TCCAGCGAAGATAAT GCGGAGGTC ACA GACCTCCGC GTGCGATGTTCGGAC Rcas_1300 1679380 - 1673372 - | alpha-2-macroglobulin domain-containing protein TERM 1273 1676210 - 1676220 + g 76 -6.8 -4.41548 | overlap 1676199 TGCTGTTTCGCCGGG GCGA TAC TCGC TTTTGTCGGCTATCA Rcas_1301 1679551 - 1679886 + | DNA polymerase beta subunit Rcas_1302 1679867 - 1680277 + | HEPN domain-containing protein TERM 1274 1680742 - 1680693 - g 71 -13.5 -2.53715 | gap 1, overlap 1680692 GGTACGAGCACGAAT GGCGCGCCTACGG-CTATGGTTTC CCC GAAACCCGCGACCGCATGCGCGCC TTCCGCGAGGCGACA Rcas_1303 1680284 - 1681291 + | luciferase family protein Rcas_1304 1683949 - 1682693 - | nuclease SbcCD, D subunit Rcas_1305 1685188 - 1684064 - | hypothetical protein Rcas_1306 1685484 - 1685242 - | hypothetical protein Rcas_1307 1686831 - 1685665 - | hypothetical protein TERM 1275 1686204 - 1686216 + g 72 -2.6 -4.77438 | CTGCCTGAAGATAAC GCTG CACCT CGGC TTTTTCGTCGTAGAT TERM 1276 1686492 - 1686482 - G 71 -8.2 -3.90291 | overlap 1686465 AGCGGCTTAATGAAA GGGC GCC GCCC GACGATCACAGCGTC Rcas_1308 1687600 - 1686875 - | phosphoribosyltransferase Rcas_1309 1688234 - 1689088 + | hypothetical protein TERM 1277 1689192 - 1689232 + G 71 -8.9 -3.86202 | GCTTTACCGGCAGCA GCGCAACCTGGGATGAGGT CGT GCCTCATTTCATGCAGCGC TTTCGTGTGATCCGC Rcas_1310 1689098 - 1689907 + | alpha/beta hydrolase fold TERM 1278 1691873 - 1691883 + F 74 -5.4 -4.52589 | TTCGCCATTGCATAG GTGT ATA ACAC TTTTGTGTGCCAAAC Rcas_1311 1692859 - 1693149 + | hypothetical protein TERM 1279 1693492 - 1693502 + T 70 -4 -4.69549 | CCAGCGTGTTGACGA GTAT CTG ATAC TTTTCCTTTTCGGTT TERM 1280 1693685 - 1693700 + T 76 -5.4 -4.72007 | AGAGACGTTCTATCA GCCGAT GGAA ATTGGC TTTGTTTTGCTGCGA Rcas_1313 1694480 - 1693905 - | hypothetical protein TERM 1281 1694212 - 1694198 - G 75 -2.8 -4.83615 | opp_overlap 1694180, overlap 1694199 GACGCGGGATAAAAA CGTCCA CTT TGAACA TCGTTTCGCGGTGAA Rcas_1314 1694745 - 1694470 - | hypothetical protein TERM 1282 1694972 - 1694989 + r 95 -6.2 -5.74122 | opp_overlap 1694972, overlap 1694971 TTGCGCCATTCCAAA GCCGCT CACGGC GGCGGC TTTTTTTGTATAGTA Rcas_1315 1695798 - 1694977 - | hypothetical protein Rcas_1316 1696025 - 1696315 + | hypothetical protein Rcas_1317 1697446 - 1696772 - | phosphomethylpyrimidine kinase type-1 TERM 1283 1697066 - 1697114 + g 72 -11.7 -3.28712 | overlap 1697068 GGCCACGCGCTCGAT GATCGGCGCCG-CGCCGGGCATG CCGGT CTTGACCG-CGTCGGCGCCGATG TTGTCGAGCACCGGA TERM 1284 1697068 - 1697112 + g 80 -14.3 -3.21276 | overlap 1697066 CCACGCGCTCGATGA TCGGCGCCG-CGCCGGGCATG CCGGT CTTGACCG-CGTCGGCGCCGA TGTTGTCGAGCACCG TERM 1285 1697407 - 1697451 + g 100 -29 -3.29263 | opp_overlap 1697413, overlap 1697413 GCCCGTGGCGGGTTA TACCAATGACCGGTGACCAT CCGGC ATGGTCACCGGTCATTGGTA TTATCCGCCCACTGT TERM 1286 1697413 - 1697445 + g 100 -20.8 -3.41745 | opp_overlap 1697413, overlap 1697407 GGCGGGTTATACCAA TGACCGGTGACCAT CCGGC ATGGTCACCGGTCA TTGGTATTATCCGCC TERM 1287 1697445 - 1697413 - G 95 -20.8 -3.25823 | opp_overlap 1697413 1697407 GGCGGGTTATACCAA TGACCGGTGACCAT CCGGC ATGGTCACCGGTCA TTGGTATTATCCGCC Rcas_1318 1697886 - 1697452 - | UspA domain-containing protein Rcas_1319 1700693 - 1697904 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1288 1699688 - 1699657 - G 70 -13 -2.87132 | CCGCCTGCCCAGATA GCGTTGACCGTCAG GGCA CTGCCGGTCAACGT CTCAACCCGATCAAG Rcas_1320 1701237 - 1700713 - | NADH-quinone oxidoreductase, E subunit Rcas_1321 1702517 - 1701264 - | NADH dehydrogenase I, D subunit TERM 1289 1702251 - 1702271 + g 76 -9.7 -4.01078 | CGCCAGATAATCCGT GCGGTCG GTCAACA CGACCGC TTTCTGATACGTTTT Rcas_1322 1703048 - 1702524 - | NADH (or F420H2) dehydrogenase, subunit C TERM 1290 1703094 - 1703071 - R 100 -8.9 -4.82901 | gap 1, opp_overlap 1703069 CTCCTGGCATAAAAA GCGGGT-TGC GCCAT GCATACCCGC AGTATATCGCACGCT Rcas_1323 1703627 - 1703124 - | NADH-quinone oxidoreductase, B subunit Rcas_1324 1703974 - 1703618 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Rcas_1325 1704594 - 1704067 - | methylated-DNA--protein-cysteine methyltransferase Rcas_1326 1705861 - 1704596 - | hypothetical protein Rcas_1327 1706800 - 1706021 - | hypothetical protein TERM 1291 1706669 - 1706642 - G 76 -8.2 -4.23674 | overlap 1706643 CGTGAGCAAGAGAAA CGCCGCTGCGCC GAGG GGCGCGCCGCCG ACTGCAAAACCGCCG Rcas_1328 1708038 - 1707040 - | glycosyl transferase family protein TERM 1292 1707366 - 1707323 - G 79 -13.8 -3.53091 | opp_overlap 1707325, overlap 1707309 1707361 ACGCCGGTTGGGAAA CAGCGGATGATGGCGCGCAA GCGA TTGCGCCCCAGTAACCGCTG CTTCAGCGGCGACCC Rcas_1329 1708117 - 1708569 + | hypothetical protein TERM 1293 1708591 - 1708615 + T 100 -16.4 -4.00532 | ATTCAACATCTATCA CGCCCCTGGC TGTAC GCCGGGGGCG TTTCCTGTTTACGGC Rcas_1330 1709070 - 1708624 - | septum formation initiator Rcas_1331 1709700 - 1709281 - | hypothetical protein Rcas_1332 1711035 - 1710139 - | tRNA (guanine-N1)-methyltransferase Rcas_1333 1711121 - 1711618 + | carbonic anhydrase Rcas_1334 1712698 - 1713165 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Rcas_1335 1713773 - 1713162 - | hypothetical protein Rcas_1336 1714415 - 1713804 - | hypothetical protein Rcas_1337 1715368 - 1714430 - | acetamidase/formamidase TERM 1294 1714704 - 1714720 + g 70 -10.1 -3.55622 | opp_overlap 1714695 AACTGATAGCTCCAG GGGCGCA GAC TGCGTCC TTTGAGCACGTTGAA Rcas_1339 1717822 - 1717106 - | metallophosphoesterase Rcas_1338 1715938 - 1717185 + | FAD dependent oxidoreductase TERM 1295 1717252 - 1717236 - Gf 80 -10.1 -4.07568 | GTGGCGCCGGTAAAA CTGCCGA ATG CCGGCAG CACACCGACCTGCGC TERM 1296 1718052 - 1718031 - g 83 -7.9 -4.60487 | gap 1, opp_overlap 1718032 1718035, overlap 1718032 1718033 GACCAGCTGGAAAAA GTG-CCGCGC CCC GCGCGGGCGC CCGCGATGGCGGCGG Rcas_1340 1717866 - 1718111 + | hypothetical protein Rcas_1341 1718232 - 1718672 + | membrane protein of unknown function TERM 1297 1718704 - 1718683 - f 100 -15.9 -4.13748 | GCTAAAAAGAGGAAA CCGGTCGTC ATAC GACGACCGG TGGGGATAAGAGAGG TERM 1298 1719470 - 1719460 - g 73 -8.2 -4.08216 | opp_overlap 1719463, overlap 1719461 CGACCTGGCGGAAAA GGCG CAG CGCC AGGGGTTCGACTGGC TERM 1299 1719679 - 1719700 + G 76 -10.9 -3.72893 | gap 1 CGACGCCGTCTGGCA GGCGATCGAG ACG CTCGA-CGCC TTTCATGGGCAGGTA TERM 1300 1719840 - 1719813 - g 70 -9.9 -3.61356 | AGTATTCACTTGAAA CGTTGATCTCC ATGCTG GGAGATCCACG CCTGGCAGATCGGTT TERM 1301 1720216 - 1720231 + G 70 -10.4 -3.67517 | opp_overlap 1720215, overlap 1720218 CATTGTTGTAGAGAG TCGCGC GGCT GCGCGA TTTCCGCTGTTGCTC Rcas_1342 1718879 - 1720888 + | hypothetical protein Rcas_1343 1721508 - 1720867 - | hypothetical protein Rcas_1344 1722529 - 1721849 - | hexapaptide repeat-containing transferase Rcas_1345 1723146 - 1722526 - | undecaprenyl-phosphate galactose phosphotransferase Rcas_1346 1724350 - 1723151 - | glycosyl transferase group 1 Rcas_1347 1725450 - 1724347 - | glycosyl transferase group 1 Rcas_1348 1726393 - 1725458 - | glycosyl transferase family protein Rcas_1349 1727556 - 1726372 - | glycosyl transferase group 1 TERM 1302 1726435 - 1726422 - G 88 -3.8 -5.34555 | GCAGACGATAAAAAA TGCG CTCTTC CGCA CACACGACACGCTGG Rcas_1350 1728761 - 1727541 - | glycosyl transferase group 1 Rcas_1351 1730111 - 1728765 - | O-antigen polymerase TERM 1303 1729949 - 1729932 - GR 76 -10.5 -3.75024 | overlap 1729904 1729933 CCCCATCACGAAGAA CGCAGCG GCGC CGCCGCG CAACACCAGGAATAC Rcas_1352 1731354 - 1730080 - | polysaccharide biosynthesis protein Rcas_1353 1733274 - 1731400 - | non-specific protein-tyrosine kinase Rcas_1354 1733889 - 1733428 - | response regulator receiver protein TERM 1304 1733895 - 1733910 + r 70 -3.2 -4.63218 | overlap 1733897 CACACTCCATAGTGT TTCACC GCCT GGTGCA TTTTCTTCACGGAAG Rcas_1355 1735195 - 1734503 - | two component LuxR family transcriptional regulator TERM 1305 1734722 - 1734762 + g 71 -11 -3.53091 | overlap 1734716 CGGCTCGATTGGCGT CGCGTCATCGGTTGGCGT CGCAT GCGCCAGCCGACGCAGCG TTTGCAGCACCAGAT Rcas_1356 1736095 - 1735247 - | histidine kinase Rcas_1357 1736955 - 1736248 - | sortase family protein Rcas_1358 1737503 - 1736952 - | hypothetical protein Rcas_1359 1738501 - 1737500 - | TPR repeat-containing protein TERM 1306 1737607 - 1737651 + g 84 -17.2 -2.82516 | gap 2 GTCGATCGCCCCCTT GCGCGCGGTACAG-CGCG-GCG GCG CGCTCGCGGCAGTACTGTGCGC TCTCATCATCGCCAA Rcas_1360 1740442 - 1738511 - | polysaccharide biosynthesis protein CapD Rcas_1361 1741662 - 1740439 - | glutamine--scyllo-inositol transaminase Rcas_1362 1742727 - 1741762 - | hypothetical protein Rcas_1363 1745697 - 1742779 - | von Willebrand factor type A TERM 1307 1742850 - 1742868 + g 76 -5.9 -4.63527 | overlap 1742852 ACTGTTCTTCCGTCG CTTCCGG CGAGA CCGGACG TTTTTCGGATGATCG TERM 1308 1743838 - 1743817 - G 93 -7.2 -5.06816 | opp_overlap 1743833, overlap 1743818 AGGTGTGAACAAAAA CGTGCGCG CCGCTT CGCGCACC TCGGTGCCATTGTAG TERM 1309 1743837 - 1743818 - G 73 -10.7 -3.63367 | opp_overlap 1743833, overlap 1743817 GGTGTGAACAAAAAC GTGCGCG CCGCTT CGCGCAC CTCGGTGCCATTGTA Rcas_1364 1745851 - 1746372 + | bidirectional hydrogenase complex protein HoxE Rcas_1365 1746535 - 1748133 + | NADH dehydrogenase (quinone) Rcas_1366 1748157 - 1748864 + | bidirectional hydrogenase complex protein HoxU Rcas_1367 1748985 - 1749530 + | NADH ubiquinone oxidoreductase 20 kDa subunit Rcas_1368 1749542 - 1750969 + | nickel-dependent hydrogenase large subunit Rcas_1369 1751294 - 1751737 + | hypothetical protein TERM 1310 1752584 - 1752611 + F 77 -12 -3.57406 | gap 1, overlap 1752582 1752585 1752588 GGGCCACCGGTCCTT G-GCATGGCGCGC GGA GCGCGCCATCCTC TCTTTGTCATGGCGC TERM 1311 1752585 - 1752609 + F 89 -15.7 -3.36228 | overlap 1752584 1752582 1752588 GGCCACCGGTCCTTG GCATGGCGCGC GGA GCGCGCCATCC TCTCTTTGTCATGGC TERM 1312 1752588 - 1752606 + F 81 -16 -2.83921 | overlap 1752585 1752584 1752582 CACCGGTCCTTGGCA TGGCGCGC GGA GCGCGCCA TCCTCTCTTTGTCAT TERM 1313 1752744 - 1752762 + F 81 -16 -2.83921 | overlap 1752741 1752740 CGCCGGTCCTTGTCA TGGCGCGC GGA GCGCGCCA TCCTCTCTTTGTCAT Rcas_1370 1752979 - 1753290 + | hypothetical protein Rcas_1371 1753486 - 1754313 + | protein-disulfide isomerase-like protein Rcas_1372 1754505 - 1756472 + | putative PAS/PAC sensor protein TERM 1314 1756511 - 1756545 + F 95 -14.3 -4.08887 | gap 2 GGCAGCGCGTGGGTT GACGGTCGGGGCGCGCC ATT GGCGCGC-CCG-CAGTC TTTGATTTCAATGAT Rcas_1373 1756907 - 1757128 + | hypothetical protein TERM 1315 1757156 - 1757138 - f 100 -10.2 -4.94487 | CGATAAAACAGAAAA CCCCTGCG TAT CTCAGGGG TTCCGCTCCGGTGGA Rcas_1374 1757572 - 1757913 + | hypothetical protein Rcas_1375 1757944 - 1760070 + | peptidase S9 prolyl oligopeptidase Rcas_1376 1760063 - 1760320 + | hypothetical protein Rcas_1377 1760338 - 1762095 + | dynamin family protein Rcas_1378 1762095 - 1762937 + | hypothetical protein Rcas_1379 1763280 - 1765358 + | putative serine protein kinase, PrkA TERM 1316 1765409 - 1765359 - f 100 -21 -3.2981 | overlap 1765352 GATATGAAGCACTAA GCGCCAGCCTGGGCGGGTGAAGGC GGT GCCTTCGCCTACCCCGGCAAGCGC CGAAAGGCAAAAGGT TERM 1317 1765638 - 1765612 - g 88 -4.4 -5.27779 | gap 1, opp_overlap 1765628, overlap 1765614 1765626 1765628 GGCAAGATCAAAAAA GACCTGCG-CA AGTACA TGTCGCAGGGC GAAATGATTGGACGC TERM 1318 1765636 - 1765614 - g 71 -5.6 -4.26398 | gap 1, opp_overlap 1765628, overlap 1765612 1765626 1765628 CAAGATCAAAAAAGA CCTGCG-CA AGTACA TGTCGCAGG GCGAAATGATTGGAC Rcas_1380 1765543 - 1766652 + | hypothetical protein TERM 1319 1768748 - 1768738 - g 72 -2.4 -4.78107 | GATTATGACGAAAAA GGCG TTG CGCG ATGATGAGTTGATCG Rcas_1381 1766672 - 1769368 + | SpoVR family protein Rcas_1382 1769390 - 1769923 + | hypothetical protein TERM 1320 1770247 - 1770276 + G 76 -11.3 -3.78934 | opp_overlap 1770239, overlap 1770248 AACCGAAGCGCTGGT CGATGCCGCGCTC GAAT GGGCGCGGCAGCA TTATTCTCCGCACGA TERM 1321 1770248 - 1770275 + G 77 -14.8 -2.87146 | opp_overlap 1770239, overlap 1770247 ACCGAAGCGCTGGTC GATGCCGCGCTC GAAT GGGCGCGGCAGC ATTATTCTCCGCACG Rcas_1383 1769927 - 1770796 + | HemK family modification methylase Rcas_1384 1772140 - 1770944 - | hypothetical protein Rcas_1385 1773418 - 1772144 - | glycoside hydrolase family protein Rcas_1386 1774448 - 1773483 - | 3-dehydroquinate synthase Rcas_1387 1774858 - 1774448 - | DNA mismatch endonuclease vsr Rcas_1388 1775731 - 1774862 - | hypothetical protein Rcas_1389 1776881 - 1775718 - | DNA-cytosine methyltransferase Rcas_1390 1778945 - 1777005 - | hypothetical protein Rcas_1392 1780311 - 1779649 - | redox-sensing transcriptional repressor Rex Rcas_1393 1782723 - 1780435 - | hypothetical protein TERM 1322 1780839 - 1780829 - G 90 -8.2 -4.87389 | GAGTGCAAAAAGAAA CGCG TGG CGCG CCCAAGCGTCATGAG Rcas_1394 1784017 - 1782704 - | hypothetical protein TERM 1323 1783317 - 1783301 - G 76 -10.8 -3.71848 | TTCCGCCAGCAACAA CGCCCG CCCGT CGGGCG CAAATCGCACCAGCG Rcas_1395 1785867 - 1784017 - | type IV secretory pathway VirB4 components-like protein TERM 1324 1785049 - 1785059 + g 72 -4 -4.66833 | CGCCAGCAACCCGCC CATA GTG TATG TTTTTCCGCTTCCCG Rcas_1396 1786548 - 1785874 - | hypothetical protein Rcas_1397 1786930 - 1786541 - | hypothetical protein Rcas_1398 1787249 - 1786950 - | hypothetical protein Rcas_1399 1790144 - 1787307 - | peptidase M23B Rcas_1400 1792669 - 1790141 - | hypothetical protein TERM 1325 1792424 - 1792371 - G 78 -14.7 -3.06796 | gap 3, opp_overlap 1792371 GCTGATGGGAGGGAA CGCGGCGC-GCCCGC-ATTC-CGTGA AGAGA TCACGAGAGCAGCGGACAGCGCCGCG CGCAAGCGCCATCGA Rcas_1401 1793409 - 1792711 - | hypothetical protein Rcas_1402 1794217 - 1793426 - | hypothetical protein Rcas_1403 1795189 - 1794239 - | hypothetical protein Rcas_1404 1797259 - 1795202 - | type II secretion system protein E TERM 1326 1796955 - 1797003 + g 93 -19.6 -3.06796 | gap 2 AGCAGGGTTTCGTCA TCGGTCGGCA-CGCGCGC-CAGCG GTC CGCCGCGCGCGCGGTGCTGCCCGA TTGCCTGGCGTAGCA TERM 1327 1797669 - 1797648 - R 70 -3.7 -4.63542 | gap 1, overlap 1797649 1797650 GACAACCTTCAAAAA CCGC-CTTCA ACC TGAAGCGCCG GCTTCCCCGGAAACC Rcas_1405 1798891 - 1797641 - | ATPase involved in chromosome partitioning-like protein Rcas_1406 1800178 - 1798922 - | type II secretion system protein E TERM 1328 1799702 - 1799682 - G 76 -8.2 -4.13767 | CGGGTGATGGCAAAA CGCAGCCG CTGGT CGGCTGTG CCGTAGAGCGCGTGA TERM 1329 1800124 - 1800140 + g 77 -3.7 -4.81863 | CCTTTCGATGTTCTT CGAGA GACAACA TCTCG TTTTCTTGTCCGTTT TERM 1330 1800187 - 1800169 - G 77 -4.4 -4.82901 | opp_overlap 1800171, overlap 1800171 TTTTGGCGACAAAAA GCCCGTCC ATA GGAAGGTC TCCTTTACAGCGACG Rcas_1407 1801128 - 1800232 - | SAF domain-containing protein Rcas_1408 1801688 - 1801164 - | hypothetical protein Rcas_1409 1802360 - 1801707 - | TadE family protein Rcas_1410 1805537 - 1802421 - | hypothetical protein TERM 1331 1803147 - 1803098 - G 70 -12.7 -2.90496 | gap 1, overlap 1803095 GGCTCGTGGAAATGA CCGCGCGG-TGCAGCAGCATCGCC GGC AGCGCCGCCGCCTCATCCTCGCGG AACGCGCGCAATTGC TERM 1332 1804824 - 1804882 + g 72 -12 -3.36273 | opp_overlap 1804809, overlap 1804837 CTGCCCCGGCGTCTC CGTCGGCGTCTCCGGCGGCGGCGTCTCC GTC GGCGGCGGCGGCGTCGGCGTCGTCCCCG TTCCTGTTCCCGGCG Rcas_1411 1806200 - 1805571 - | hypothetical protein TERM 1333 1806063 - 1806033 - G 70 -12.4 -3.14132 | CTGTCCGCCGACGAA CGGGGCGGGCGTCG CGG CGACGACCGGCGCG TTCGGGTCGCCGAGG TERM 1334 1806152 - 1806107 - G 80 -14.7 -3.14132 | gap 1, overlap 1806110 TCGCCTGCGGACGAA GCAGCCA-CGCCGCCGCTATCG CCG CGATGGCGGCGGGGATGACCAC GAAGGTCAGCAAGGT TERM 1335 1806149 - 1806110 - G 75 -15 -2.77899 | gap 1, overlap 1806107 CCTGCGGACGAAGCA GCCA-CGCCGCCGCTATCG CCG CGATGGCGGCGGGGATGAC CACGAAGGTCAGCAA Rcas_1412 1807482 - 1806259 - | SCP-like extracellular TERM 1336 1806991 - 1807029 + g 91 -19.4 -3.05384 | overlap 1807021 GATGTGACCGCCTGT GCCGCGCGCGGCGAGGTC GTA GGCCAGGCGGCGCGCGGC TTGGGTCAGGCGCGG TERM 1337 1807256 - 1807225 - G 73 -11.4 -3.55444 | CGGCGAGGTCGGAAA CGCCGACGGCGCGG CGGG CGGCGTCACCGGCG GAGTTGGGAACGCAA TERM 1338 1807414 - 1807372 - G 75 -11.9 -3.60792 | gap 2 CGTCGAAGTCGGAAA CGCCAGCGGCGCGGCGGGCGT GGG ACGGACGC-GCGCTGC-GGCG TCGAGCGAGAGGCTC TERM 1339 1807642 - 1807588 - R 93 -17.4 -3.28712 | gap 3, overlap 1807563 1807589 1807593 GCCGGTCGCGCACAA CGCA-ACGGCGTTCGCGCTGGCGAAGC CGCA GCTTCGC--GCCCGAACGCCGTCTGCA TATCGCGGCTCGTCT TERM 1340 1807641 - 1807589 - R 85 -18.7 -2.57132 | gap 3, overlap 1807563 1807588 1807593 CCGGTCGCGCACAAC GCA-ACGGCGTTCGCGCTGGCGAAGC CGCA GCTTCGC--GCCCGAACGCCGTCTGC ATATCGCGGCTCGTC TERM 1341 1807636 - 1807593 - R 90 -18.3 -3.23274 | gap 2, overlap 1807563 1807589 1807588 TCGCGCACAACGCAA CGGCGTTCGCGCTGGCGAAGC CGCA GCTTCGC--GCCCGAACGCCG TCTGCATATCGCGGC Rcas_1413 1809289 - 1808522 - | HAD family hydrolase Rcas_1414 1809555 - 1809286 - | hypothetical protein Rcas_1415 1810666 - 1809566 - | methicillin resistance protein TERM 1342 1810113 - 1810123 + g 71 -8.2 -3.83026 | overlap 1810112 ACCGCCACCCCTTCC CGCG CGG CGCG TTTGATGTCGGCGCG TERM 1343 1810523 - 1810509 - G 73 -11.4 -3.59979 | opp_overlap 1810492 GGTTTCCAGCCGAAA CGCGCT TTC AGCGCG CCCCACCCCGACGAT Rcas_1416 1811469 - 1810651 - | LmbE family protein TERM 1344 1810776 - 1810793 + g 73 -8.3 -4.09685 | overlap 1810777 CCATCTGGCTGCGAT ACGCGGC GATT GCCGCGA TTTTCGCCCGTAGCG Rcas_1417 1812762 - 1811833 - | HEAT repeat-containing PBS lyase TERM 1345 1812068 - 1812119 + g 73 -11.5 -3.66178 | opp_overlap 1812041 1812039 1812036 GAACGCGCCAGGTCT GCCATTTCGCCGGCGGCGCGC-GCG GCTT CGTAGCGCAACGCCGG-GGAAGGGC TTTCGAGTTCGCGGC Rcas_1418 1814649 - 1812775 - | hypothetical protein Rcas_1419 1814801 - 1814646 - | hypothetical protein TERM 1346 1814874 - 1814842 - H 76 -9.8 -3.77303 | gap 1, opp_overlap 1814852, overlap 1814843 CATTGAAACAGACAA GGCGCAGC-CCGACG TTTG CGCCGATGCTGCGCT AGATGTCTATTATAC TERM 1347 1814873 - 1814843 - H 75 -13.3 -2.85659 | gap 1, opp_overlap 1814852, overlap 1814842 ATTGAAACAGACAAG GCGCAGC-CCGACG TTTG CGCCGATGCTGCGC TAGATGTCTATTATA TERM 1348 1815997 - 1815961 - g 73 -10.9 -3.55444 | gap 3, overlap 1815962 TCGCTATTCTCGAAA CGGCGCGCACCCACG-CC GCCT GGTCG-GGGCGCGCGC-G CCTGACGGTGGAAGA TERM 1349 1815999 - 1815962 - g 72 -13.4 -2.73124 | gap 2, overlap 1815961 CGCTATTCTCGAAAC GGCGCGCAC-CCACG-CC GCCT GGTCGGGGCGCGCGCGCC TGACGGTGGAAGATA Rcas_1420 1815090 - 1816184 + | magnesium chelatase Rcas_1421 1816181 - 1817170 + | von Willebrand factor type A TERM 1350 1817552 - 1817509 - g 74 -12.2 -3.53012 | gap 1 TTCCTGCTGCTGAAA CGCCGCCG-ACCGGGAGCGCC GAA GTCGCGCCGGAAGCGGCGGCG CCTGCCGGTACTGCC Rcas_1422 1817226 - 1818737 + | RNA-binding S1 domain-containing protein TERM 1351 1818803 - 1818781 - f 100 -22 -3.34233 | opp_overlap 1818781, overlap 1818772 GTATAATTGCCAGAA CCGGCGCGGC ATT GCCGCGCCGG TTGGGTGTTGCGCCG TERM 1352 1818781 - 1818803 + F 100 -22 -3.1855 | opp_overlap 1818781 1818772 GTATAATTGCCAGAA CCGGCGCGGC ATT GCCGCGCCGG TTGGGTGTTGCGCCG Rcas_1423 1818912 - 1819085 + | ribosomal protein L34 TERM 1353 1819343 - 1819353 + G 84 -8.2 -4.52589 | GCGCCGGGTGCGTGA GGCG GTG CGCC TTTTGTATCCGCAGA TERM 1354 1819442 - 1819458 + G 72 -13.7 -2.70932 | overlap 1819440 CTTCCCGCAACTTCA GGCGCTG GTG CAGCGCC TGCTTCAACGCGCCG Rcas_1424 1819149 - 1819517 + | ribonuclease P protein component Rcas_1425 1819546 - 1820715 + | site-specific DNA-methyltransferase (adenine-specific) Rcas_1426 1821040 - 1821429 + | hypothetical protein TERM 1355 1822544 - 1822517 - g 75 -12 -3.54424 | gap 1, opp_overlap 1822535 1822538, overlap 1822518 1822534 CCGCACCCGTCGAAA GCGCCGCGCCG ACGGAAG CGGCGCG-CGC GGAAGCGCGGCGTGT Rcas_1427 1821565 - 1822602 + | 60 kDa inner membrane insertion protein Rcas_1428 1822682 - 1823371 + | single-stranded nucleic acid binding R3H domain-containing protein TERM 1356 1823391 - 1823433 + F 100 -20.6 -5.00138 | opp_overlap 1823393 1823398, overlap 1823393 GGCACGACGGTAGCA GAGCAGAGCGACAATCGGCG ACA CGCTGGCTGTCGCTCTGCCC TTTTTAATTTCCATG TERM 1357 1823431 - 1823393 - f 88 -19.6 -2.80113 | opp_overlap 1823391 1823393, overlap 1823398 CACGACGGTAGCAGA GCAGAGCGACAATCGGCG ACA CGCTGGCTGTCGCTCTGC CCTTTTTAATTTCCA TERM 1358 1823393 - 1823431 + F 100 -21.8 -2.74314 | opp_overlap 1823393 1823398, overlap 1823391 CACGACGGTAGCAGA GCAGAGCGACAATCGGCG ACA CGCTGGCTGTCGCTCTGC CCTTTTTAATTTCCA Rcas_1429 1823446 - 1824264 + | ribokinase-like domain-containing protein TERM 1359 1824404 - 1824394 - T 70 -3.2 -4.62069 | GCGTCACCGGAAAAA GGAT AAG ACCC ACTTCCACATCGGTA TERM 1360 1825248 - 1825290 + T 90 -14.9 -3.59979 | overlap 1825249 1825251 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1361 1825249 - 1825289 + T 86 -18.4 -2.75844 | overlap 1825248 1825251 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 1362 1825251 - 1825286 + T 88 -19.8 -2.65354 | gap 1, overlap 1825249 1825248 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_1430 1826299 - 1825457 - | hypothetical protein Rcas_1431 1826952 - 1826299 - | TenA family transcription regulator Rcas_1432 1828049 - 1827261 - | hypothetical protein Rcas_1433 1829063 - 1828275 - | hypothetical protein TERM 1363 1829149 - 1829175 + H 86 -12.3 -3.88946 | ATGCTATACTTCCTT CACATCGCGTC TTTCC GGCGCGGTGTG TTGTTCTGTACCGTC Rcas_1434 1829171 - 1829848 + | translation initiation factor IF-3 Rcas_1435 1829862 - 1830065 + | ribosomal protein L35 Rcas_1436 1830102 - 1830455 + | ribosomal protein L20 Rcas_1437 1830533 - 1831240 + | tRNA/rRNA methyltransferase (SpoU) TERM 1364 1831625 - 1831654 + F 100 -16.5 -4.46854 | gap 1 AGGGTGGTACCACGG GCCACGC-CTCGTC CCT GGCGAGTGCGTGGC TTTGTTGTTGAGTGG TERM 1365 1831823 - 1831861 + G 75 -11.7 -3.64703 | opp_overlap 1831842 GAGTCGGGGGCTTGG CGCGCTGCCGGCCG-AGGA ACG TCCGGCTGCCGG-AGCGCG TTTCAATGCCGCACG Rcas_1438 1831677 - 1832720 + | phenylalanyl-tRNA synthetase, alpha subunit Rcas_1439 1832720 - 1834552 + | hypothetical protein TERM 1366 1834873 - 1834853 - g 76 -6.7 -4.40003 | overlap 1834855 CCCTACAAAGACAAA GGGCGCCTG TCG CAGCCGCTC AAGGGGGTCTTCGCG Rcas_1440 1834562 - 1837063 + | phenylalanyl-tRNA synthetase, beta subunit Rcas_1441 1837550 - 1838569 + | hypothetical protein Rcas_1442 1840699 - 1839113 - | FliA/WhiG family RNA polymerase sigma 28 subunit Rcas_1443 1843607 - 1841175 - | hypothetical protein TERM 1367 1843041 - 1843077 + g 71 -10.8 -3.53343 | gap 1, overlap 1843049 1843050 CAGATCAGGCTCAAT GTCGCCCATGGC-GTCG CCAT CGTCAGCCATCGGCGGC TTTGCCGACGCCGTT Rcas_1444 1844203 - 1843952 - | hypothetical protein Rcas_1445 1846547 - 1844613 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 1368 1845136 - 1845101 - G 100 -16 -4.56775 | ATTCCGGCGCAAAAA CCGCGCCCGGCGACAG AAGC CTGGCGACCGGCGCGG GAGCGGCGAGCAGCA TERM 1369 1845615 - 1845603 - G 70 -10.5 -3.54459 | CCAATCGGGGCGAAA CGGCG AGC CGCCG GTGGCGTAGGTGGCG TERM 1370 1846383 - 1846397 + g 70 -10 -3.65902 | opp_overlap 1846351 CGTTGGGCGCCAGGT GTGGTG CAG CACCAC TTTCGATGGGGTCAA TERM 1371 1846728 - 1846748 + r 100 -8.9 -5.27335 | opp_overlap 1846728 CGGGGAGCCAGTAAA CGCCCGGAA CCA TACCGGGTG TTTTTGTTTCCAGGC Rcas_1446 1848025 - 1847318 - | uncharacterized peroxidase-related enzyme TERM 1372 1847571 - 1847585 + g 73 -3.4 -4.72986 | overlap 1847572 TTGGCGGCAATTTGT TCGGCG AGG CGCGGG TTTTTGCTGCGGATC Rcas_1447 1849778 - 1848921 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein TERM 1373 1850873 - 1850891 + G 79 -8.8 -4.37886 | opp_overlap 1850870 1850869 TGGCGATGAAAGCCG CGTTTGCG GAT CGCAATCG TTTTATCGGCGATCC TERM 1374 1850972 - 1850950 - g 76 -9.1 -4.0274 | gap 1 CTCACGAGCAAAGAA CGCGCCGCGC AGTG GCG-GACGCG GATCGACGCGAGACA Rcas_1448 1849876 - 1851570 + | gamma-glutamyltransferase Rcas_1449 1851785 - 1852102 + | hypothetical protein TERM 1375 1852141 - 1852172 + F 75 -8 -4.21989 | gap 1, opp_overlap 1852135 ACTCATATATCGCAG TGCGACATCGA-CAG GTT CTGATCGAAGGCGCA TTTGTTGGCGTTATC Rcas_1450 1852364 - 1852885 + | hexapaptide repeat-containing transferase Rcas_1451 1853697 - 1852864 - | hypothetical protein TERM 1376 1853978 - 1853954 - g 75 -4.1 -4.70879 | CTCAAACTCCAAAAA CCGCTGCTGCT GGA AGGGGAAGCGG GGGTTGGCAAGACCG Rcas_1452 1853846 - 1854736 + | ATPase TERM 1377 1854947 - 1854966 + G 71 -12.8 -3.08798 | overlap 1854962 1854964 CTGTACGTTGGTCTG CCGGCGGG AGGA CCTGCCGG TGTTCGATGCCGCCT TERM 1378 1855078 - 1855048 - g 76 -8.8 -4.18018 | overlap 1855058 TCCCGGTAGTCAAAA CGCCGCCAAAGCCG CTG CGTCTGCCGCGGCG TCCGCGTGGCCAGGG TERM 1379 1855077 - 1855058 - g 70 -10.6 -3.57309 | overlap 1855048 CAAAACGCCGCCAAA GCCGCTGC GTCT GCCGCGGC GTCCGCGTGGCCAGG Rcas_1453 1854756 - 1855979 + | VWA containing CoxE family protein TERM 1380 1856380 - 1856346 - g 76 -15.1 -2.52464 | gap 2, overlap 1856375 1856376 GCGTTGTCGAAGTGA CGCCGGTTG-GC-GGCG GCG CGCCTGCACAACCGGCA GCGACTCCCGCGCCT Rcas_1454 1856216 - 1857385 + | extracellular solute-binding protein TERM 1381 1857398 - 1857434 + F 86 -15.3 -3.2794 | opp_overlap 1857388 1857387 TAAACCGCTCAGGAG TGAGACCTCGCAGAC CATGTGA GTCTGCAAGGTCTCA TTGATGTGGATAAGA Rcas_1455 1857734 - 1858924 + | polar amino acid ABC transporter, inner membrane subunit Rcas_1456 1858927 - 1860138 + | polar amino acid ABC transporter, inner membrane subunit Rcas_1457 1860146 - 1860907 + | ABC transporter related Rcas_1458 1861383 - 1861003 - | hypothetical protein TERM 1382 1861424 - 1861458 + H 71 -6.8 -4.26903 | opp_overlap 1861423 CGCCGGGGACGACAT CCGACCCCGAGCGAGC AAT GCGCGCGCGGCAACGG TTTTCATAGCGTGAC Rcas_1459 1861819 - 1862832 + | cytochrome oxidase assembly TERM 1383 1862907 - 1862849 - T 91 -13.3 -3.85698 | gap 2, opp_overlap 1862855 1862865, overlap 1862850 1862857 GGTCGGGGTTAGAAA GTGAGAGATCGGCGGGCGACAGAGACGTT TGC AACCTCCCTGCCGCTCGCCGGTCT-TCA- TTCCTCGCCTTTCCT TERM 1384 1862907 - 1862850 - T 88 -19.3 -2.91276 | gap 1, opp_overlap 1862855 1862865, overlap 1862849 1862857 GTCGGGGTTAGAAAG TGAGAGATCGGCGGGCGACAGAGACGTT TGC AACCTCCCTGCCGCTCGCCGGTCT-TCA TTCCTCGCCTTTCCT TERM 1385 1862855 - 1862903 + T 100 -20.3 -3.40639 | opp_overlap 1862849 1862850 1862857, overlap 1862865 GGTTAGAAAGTGAGA GATCGGCGGGCGACAGAGACGTT TGC AACCTCCCTGCCGCTCGCCGGTC TTCATTCCTCGCCTT TERM 1386 1862901 - 1862857 - T 87 -17.1 -2.99546 | opp_overlap 1862855 1862865, overlap 1862849 1862850 TTAGAAAGTGAGAGA TCGGCGGGCGACAGAGACGTT TGC AACCTCCCTGCCGCTCGCCGG TCTTCATTCCTCGCC Rcas_1460 1863330 - 1862905 - | hypothetical protein TERM 1387 1863897 - 1863926 + G 85 -14.9 -3.59979 | GATGACGGCGAACGG GACGCGCTCCGCG CATC CGGGGTGCGCGTC TTTACGATGCACGAC Rcas_1461 1863351 - 1864250 + | arginase TERM 1388 1864638 - 1864656 + F 73 -5.2 -4.61231 | overlap 1864639 CCGTGGCGACCGTAT GCCGTGTG TAC TACACGGG TTTTTCGACATGTCC Rcas_1462 1864782 - 1865462 + | hypothetical protein TERM 1389 1865881 - 1865866 - g 73 -6.8 -4.25104 | overlap 1865876 1865877 GGCGCCCGACGAAAA TCGAGG GAAA CCCCGA TCATCCGGCGTCACT Rcas_1463 1865472 - 1868504 + | Fe-S-cluster-containing hydrogenase components 1-like protein TERM 1390 1869979 - 1869960 - g 100 -9.2 -4.81851 | ACGGAAACCGAAAAA GCGCTGGC ACAC GGCAGCGC CGGACATCACTAGGG Rcas_1464 1868577 - 1869992 + | polysulphide reductase NrfD Rcas_1465 1870006 - 1870584 + | hypothetical protein Rcas_1466 1870595 - 1871176 + | hypothetical protein TERM 1391 1871228 - 1871210 - f 77 -11.6 -3.66844 | TGGAGAGCGGAAGAA CCGGGCGC TTT GCGCCTGG GGTGGGATCCGAAAG Rcas_1467 1871282 - 1872526 + | hypothetical protein TERM 1392 1872582 - 1872553 - f 95 -20.1 -2.72558 | opp_overlap 1872553 1872556, overlap 1872556 ATAACCGTTGAATGA CAAGAGGCACCCC GCTA GGGGCGCCTCTTG TTCTGATATGCATCA TERM 1393 1872553 - 1872582 + F 100 -17.9 -3.47573 | opp_overlap 1872553 1872556, overlap 1872556 ATAACCGTTGAATGA CAAGAGGCACCCC GCTA GGGGCGCCTCTTG TTCTGATATGCATCA TERM 1394 1872579 - 1872556 - f 93 -16 -3.51032 | opp_overlap 1872553 1872556, overlap 1872553 ACCGTTGAATGACAA GAGGCACCCC GCTA GGGGCGCCTC TTGTTCTGATATGCA TERM 1395 1872556 - 1872579 + F 91 -13.8 -3.87104 | opp_overlap 1872556 1872553, overlap 1872553 ACCGTTGAATGACAA GAGGCACCCC GCTA GGGGCGCCTC TTGTTCTGATATGCA Rcas_1468 1873739 - 1874152 + | transposase IS200-family protein Rcas_1469 1878294 - 1875883 - | peptidase S45 penicillin amidase Rcas_1470 1879392 - 1879682 + | prevent-host-death family protein Rcas_1471 1879750 - 1880091 + | hypothetical protein TERM 1396 1881033 - 1881016 - T 72 -12.7 -3.05596 | TAGCTCGGGAGCGAA GCGGACG AGCG CGTCCGC TCGCAAGATCGCGGC Rcas_1473 1881695 - 1881414 - | hypothetical protein TERM 1397 1881836 - 1881868 + r 75 -7.6 -4.26076 | opp_overlap 1881826 1881824 1881841, overlap 1881837 1881839 1881841 GAACAGCGGGCATTC AAAAACCCGCTCCC GACAA GGGAGCGGGTGTCC TTTTGGTGGAGATGG TERM 1398 1881839 - 1881865 + r 78 -13.7 -3.13504 | opp_overlap 1881826 1881824 1881841, overlap 1881837 1881836 1881841 CAGCGGGCATTCAAA AACCCGCTCCC GACAA GGGAGCGGGTG TCCTTTTGGTGGAGA TERM 1399 1881863 - 1881841 - R 100 -16.3 -4.65895 | opp_overlap 1881841 1881839 1881837 1881836, overlap 1881826 1881824 GCGGGCATTCAAAAA CCCGCTCCC GACAA GGGAGCGGG TGTCCTTTTGGTGGA TERM 1400 1881841 - 1881863 + r 83 -16.3 -3.12521 | opp_overlap 1881826 1881824 1881841, overlap 1881839 1881837 1881836 GCGGGCATTCAAAAA CCCGCTCCC GACAA GGGAGCGGG TGTCCTTTTGGTGGA Rcas_1474 1883647 - 1882751 - | methylthioadenosine phosphorylase Rcas_1475 1884976 - 1883666 - | ATP-dependent protease ATP-binding subunit Rcas_1476 1885654 - 1884995 - | endopeptidase Clp Rcas_1477 1887180 - 1885660 - | trigger factor TERM 1401 1887809 - 1887820 + G 72 -7.2 -4.1899 | overlap 1887808 GCGATGTTCTTGCAG CGCG TATG CGCG TTTTGCGTCGCCTGG Rcas_1478 1887478 - 1891218 + | transcription-repair coupling factor Rcas_1479 1893005 - 1891290 - | serine/threonine protein kinase TERM 1402 1893136 - 1893120 - H 72 -13.7 -2.66634 | overlap 1893117 GATTGTACCACATCA CGTCGGC GAT GCCGACG GCGCATGTGCAAAAG Rcas_1480 1893169 - 1893834 + | winged helix family two component response transcriptional regulator TERM 1403 1895085 - 1895064 - g 73 -10.9 -3.55444 | gap 1, opp_overlap 1895071 1895081 GCGCTACGCTCGAAA GCCACGGCGA CCA TCGCC-TGGC GATGACGTGGGCGAT Rcas_1481 1893908 - 1895203 + | 3-phosphoshikimate 1-carboxyvinyltransferase Rcas_1482 1895311 - 1895901 + | hypothetical protein TERM 1404 1895895 - 1895925 + T 71 -9 -3.77808 | GCAGGAGGAAGTAGG GGGGTAGGTTGACA TTA TGTTCGTCTACCCC TTGTGTTGTCGTCCA Rcas_1483 1896859 - 1896032 - | alpha/beta hydrolase fold Rcas_1484 1897056 - 1897868 + | glutamine amidotransferase TERM 1405 1897918 - 1897888 - T 100 -18.4 -3.57144 | opp_overlap 1897886 TCTGTCAGTTGGAAA GCCTCCCACAAGTT CCG AACCTGCGGGAGGC GCTCGTATCAGTCGC Rcas_1485 1899029 - 1897926 - | anti-sigma-factor antagonist TERM 1406 1898324 - 1898347 + g 78 -11.7 -3.73224 | gap 1, opp_overlap 1898315 GAAGCACCGGCAGCG CCG-GCGCGC TGAGC GCGCGCACGG TTTCCTGAGACGTGC Rcas_1486 1899225 - 1900889 + | FAD dependent oxidoreductase Rcas_1487 1901497 - 1901898 + | hypothetical protein Rcas_1488 1903810 - 1902527 - | glycosyl transferase group 1 TERM 1407 1903665 - 1903639 - G 81 -7.8 -4.51765 | opp_overlap 1903618 1903619, overlap 1903629 1903635 GATAACCGAAAGAAA CCGTCGGTACGC CGC GCGTTTCGCCGG TGACAAGTCCACGGT Rcas_1489 1905210 - 1904023 - | glycosyl transferase group 1 Rcas_1490 1905449 - 1905207 - | hypothetical protein TERM 1408 1905579 - 1905605 + H 74 -6.5 -4.3767 | CTCCTGAGTCGTTTT TGAGCGAGCGT CGAAA AGGCTCGCGCA TTTGTTATGGTCTGC TERM 1409 1905722 - 1905712 - g 90 -8.2 -4.82667 | opp_overlap 1905709 1905712 CGATGACATGAAAAA GCGC ATT GCGC TGGTGTTTCCGGGGC TERM 1410 1905933 - 1905945 + G 83 -9.1 -4.30978 | overlap 1905927 TTGCATGCCTCGAAG CGCTC AAG GAGCG TTTTGGTCCCTTCGG Rcas_1491 1905704 - 1906678 + | malonyl CoA-acyl carrier protein transacylase TERM 1411 1907736 - 1907749 + G 72 -4.5 -4.56978 | overlap 1907726 GTAAGCCGTTCGACG CTCGT CGCG ACGGG TTTATTCTTTCGGAG TERM 1412 1907937 - 1907959 + G 76 -13.4 -3.12895 | opp_overlap 1907933, overlap 1907935 1907933 CGTTGCGCAAATCCG GTCTGCCGCC GGA GGCGGTGGAC TATATTAATGCCCAC TERM 1413 1908239 - 1908213 - g 84 -16.6 -3.0263 | ATTATGTGCCGAATA CCGCGCGCAC GGCTGAG GTGCGCGCGG CGCTGTCGAACTCGA Rcas_1492 1907036 - 1908307 + | Beta-ketoacyl synthase Rcas_1493 1909933 - 1909001 - | hypothetical protein TERM 1414 1909970 - 1910014 + r 100 -14.1 -4.84918 | AACCGCTTCAGGGGC GTGCCGGTGGCGCGCCCCGAC GAT GACGGCGTGGGCGACCGGTAC TTTTGTCTTTCTAAA Rcas_1494 1911334 - 1910060 - | seryl-tRNA synthetase TERM 1415 1910462 - 1910491 + g 74 -9.3 -3.93236 | overlap 1910486 TTCGTCGTAGCTTGT GTCGGGGTGGACA AACA TGTACATCTCGAC TTTGTCGAATTGGTG Rcas_1495 1911838 - 1911347 - | NUDIX hydrolase Rcas_1496 1912393 - 1911869 - | NUDIX hydrolase TERM 1416 1912555 - 1912531 - R 100 -11.4 -5.5353 | opp_overlap 1912529, overlap 1912549 CACATCAATAAAAAA CTCCACGTCC GCGAA GGACGAGGAG CGTGTTCCCCGTGGT Rcas_1497 1914466 - 1912838 - | gamma-glutamyltransferase TERM 1417 1914766 - 1914755 - g 70 -7.2 -4.05033 | TTGATCGCATACAAA GCCG CGCT CGGC GTCCCGCTGGCGATG Rcas_1498 1914617 - 1915123 + | hypothetical protein Rcas_1499 1915133 - 1915999 + | amidohydrolase 2 Rcas_1500 1916024 - 1916986 + | hypothetical protein Rcas_1501 1916983 - 1918545 + | hypothetical protein Rcas_1502 1919119 - 1918778 - | rhodanese domain-containing protein Rcas_1503 1920602 - 1919151 - | integral membrane sensor signal transduction histidine kinase TERM 1418 1919598 - 1919609 + g 76 -5.8 -4.57073 | TTCACATTCAGTGTG CAGG GTTA CCTG TTTTTCGAGCGCCTG Rcas_1504 1921294 - 1920599 - | two component transcriptional regulator TERM 1419 1921373 - 1921324 - R 70 -10.8 -3.42503 | opp_overlap 1921332 1921335, overlap 1921325 1921332 1921335 GTCGAATATCCATAA TTGTAACAGAAGCAGGACTCAC GACGTT GTGAGTCTTGCTTCTGTTCCGC AGAACGCGCGTTGCC TERM 1420 1921372 - 1921325 - R 76 -14.3 -2.6518 | opp_overlap 1921332 1921335, overlap 1921324 1921332 1921335 TCGAATATCCATAAT TGTAACAGAAGCAGGACTCAC GACGTT GTGAGTCTTGCTTCTGTTCCG CAGAACGCGCGTTGC TERM 1421 1921365 - 1921332 - R 76 -14 -3.11291 | opp_overlap 1921332 1921335, overlap 1921325 1921324 1921335 TCCATAATTGTAACA GAAGCAGGACTCAC GACGTT GTGAGTCTTGCTTC TGTTCCGCAGAACGC TERM 1422 1921332 - 1921365 + r 87 -16.9 -3.01712 | opp_overlap 1921325 1921324 1921332 1921335, overlap 1921335 TCCATAATTGTAACA GAAGCAGGACTCACG ACGT TGTGAGTCTTGCTTC TGTTCCGCAGAACGC TERM 1423 1921362 - 1921335 - R 73 -9.9 -3.6947 | opp_overlap 1921335 1921332, overlap 1921332 1921325 1921324 ATAATTGTAACAGAA GCAGGACTCAC GACGTT GTGAGTCTTGC TTCTGTTCCGCAGAA TERM 1424 1921335 - 1921362 + r 82 -12.8 -3.65812 | opp_overlap 1921332 1921325 1921324 1921335, overlap 1921332 ATAATTGTAACAGAA GCAGGACTCACG ACGT TGTGAGTCTTGC TTCTGTTCCGCAGAA Rcas_1505 1921984 - 1921433 - | hypothetical protein TERM 1425 1921590 - 1921606 + g 78 -5 -4.68593 | overlap 1921592 GTGCGCATGCTCTCC CTGGCG TCGTC CGCCTG TTTTTGGGTGATAAC TERM 1426 1922217 - 1922245 + H 72 -3 -4.84359 | TTCGGAACTGGGTGT TGGGGGTTCGAG TCCCT CCTGGACCGCCA TTTTTATGCCGCTGC TERM 1427 1923047 - 1923057 + G 81 -6.8 -4.76041 | ACGACGAGCCGATTG CAGC GGA GCTG TTTTTGCTCCATGTG TERM 1428 1924173 - 1924196 + G 81 -4.4 -5.055 | gap 1, overlap 1924156 1924175 CTGGCATCGTCCGCT CAG-CGGGCTG GTG CTGCCCGACGG TTTTTTGCCGGTTGC TERM 1429 1924380 - 1924360 - g 73 -12.6 -3.19175 | CTCGAACAGACGGAA CTGCCGCA TCAGG TGCGGCAG GCGCTACGTGAGTTC Rcas_1506 1922446 - 1924830 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1430 1924871 - 1924913 + T 88 -13.5 -3.59979 | overlap 1924872 1924874 ATGGTCACCCTGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1431 1924872 - 1924912 + T 84 -17 -2.75844 | overlap 1924871 1924874 TGGTCACCCTGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 1432 1924874 - 1924909 + T 85 -18.4 -2.65354 | gap 1, overlap 1924872 1924871 GTCACCCTGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_1508 1926038 - 1925343 - | peptidase membrane zinc metallopeptidase putative TERM 1433 1925621 - 1925611 - G 74 -4.6 -4.56597 | CCTGCGCGCGAAAAA GCGC CGA GCAC CAGTCCGACCATCAG Rcas_1509 1927587 - 1926082 - | ABC-2 type transporter Rcas_1510 1928671 - 1927589 - | ABC transporter related TERM 1434 1929012 - 1929000 - H 70 -3.3 -4.66537 | overlap 1928995 TGTGGCAATACAAAA CCCCG GCA CGAAG TTTCAGTCTGCGGGC TERM 1435 1929450 - 1929433 - g 71 -14.1 -2.50994 | opp_overlap 1929431 1929430, overlap 1929432 GGCAACCTGACGAAT GCGCCGC AATT GCGGCGC GAATTGTTGACGCGC Rcas_1511 1929082 - 1930482 + | amidophosphoribosyltransferase TERM 1436 1930649 - 1930637 - f 73 -10.5 -3.65351 | TCACCGCGAGTGAAA GCCCC GCT GGGGC TGCTGATGCCGGGGC TERM 1437 1931076 - 1931098 + F 89 -4.9 -5.26316 | overlap 1931075 GGGGTCGTGCGCTCG TGCGCCGC-AC GCT GTAGC-GCGCA TTTTTTGTCGGATCG TERM 1438 1931736 - 1931726 - g 71 -8.2 -3.9279 | ACGGAACGCTACAAA GGGC TGC GCCC CCATCAACTTGCCGA TERM 1439 1932396 - 1932375 - g 71 -9.4 -3.70902 | gap 1, opp_overlap 1932389, overlap 1932388 CGTTCGATACCGAAA CGC-GCGGG ATGAA CCCGCTGCG CGATGATCTCGTCGG TERM 1440 1932596 - 1932606 + G 73 -8.2 -4.06904 | overlap 1932584 1932589 GAACGCGCCGGCATG CCGG TCG CCGG TTTGTCGTTCGATAC Rcas_1512 1931195 - 1934113 + | DNA polymerase I Rcas_1513 1934377 - 1935369 + | ribonuclease III TERM 1441 1935390 - 1935419 + T 78 -7 -4.63218 | opp_overlap 1935371 1935370, overlap 1935391 1935392 CCGCCGCACTTATGG CACGGCGCGCAG CCATTC CTGCGTGCCGAA TTTTGTTGCGACCAG TERM 1442 1935392 - 1935417 + T 72 -14 -2.62244 | opp_overlap 1935371 1935370, overlap 1935391 1935390 GCCGCACTTATGGCA CGGCGCGCAG CCATTC CTGCGTGCCG AATTTTGTTGCGACC Rcas_1514 1936169 - 1935384 - | biotin/lipoate A/B protein ligase Rcas_1515 1936450 - 1936166 - | hypothetical protein Rcas_1516 1937060 - 1936683 - | transcriptional modulator of MazE/toxin, MazF Rcas_1517 1937259 - 1937035 - | hypothetical protein TERM 1443 1937589 - 1937612 + H 95 -15.3 -4.03234 | CAGCCGATTGACGCG GCGCCGCTC AGAGGC GAGCGGCGC TTTCTGTGGAGACCA Rcas_1518 1937633 - 1938196 + | translation elongation factor P TERM 1444 1939363 - 1939345 - g 79 -11 -3.91897 | opp_overlap 1939360, overlap 1939357 1939360 GCGGGGAGCGAGAAA GCCGCTGT GAA ACAGCGAC CGGAACTGCCGTTCA Rcas_1519 1938217 - 1939887 + | carbohydrate kinase, YjeF related protein Rcas_1520 1939902 - 1940687 + | hypothetical protein Rcas_1521 1940690 - 1941115 + | FmdB family regulatory protein TERM 1445 1941519 - 1941535 + F 73 -10.1 -3.57144 | TCCTTCTCCGTCCAC CTTCCCC GGT GGGGAGG TTTCAGGGTGGACAG Rcas_1522 1941956 - 1942552 + | hypothetical protein Rcas_1523 1942620 - 1942958 + | sterol-binding domain-containing protein Rcas_1524 1943607 - 1942969 - | signal transduction protein Rcas_1525 1944426 - 1943692 - | LmbE family protein TERM 1446 1944593 - 1944560 - H 79 -13.1 -3.43264 | gap 1 AATCATCGAGGAGAA CGCACGGCAGGCGCGC CCT GCGCGGATG-CGTGCG CCAATCCCGCCGCCC Rcas_1526 1945009 - 1945485 + | ribosomal protein S6 Rcas_1527 1945524 - 1945982 + | single-strand binding protein Rcas_1528 1946003 - 1946275 + | ribosomal protein S18 TERM 1447 1947886 - 1947863 - g 74 -10.2 -3.76125 | overlap 1947864 CGACGCCAACTGAAA CCGGCGTCCC TCAA GGAACGCCTG AGATAACGCCGACGC Rcas_1529 1946353 - 1947906 + | PpiC-type peptidyl-prolyl cis-trans isomerase Rcas_1530 1949184 - 1950149 + | hypothetical protein Rcas_1531 1951554 - 1950355 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Rcas_1532 1954430 - 1951569 - | alpha-ketoglutarate decarboxylase TERM 1448 1955051 - 1955065 + G 76 -5.6 -4.57569 | overlap 1955052 TTACGTCACATAGCG CCTGCC ATC GGCAGA TTTTTCACAAAGTCG TERM 1449 1955263 - 1955286 + G 81 -4.5 -4.96996 | CGTCGCGGCATCTGG CGCTGGATG GTGAAG CATCAGGCG TTTCTTTTCTTTCCG Rcas_1533 1954822 - 1955847 + | fatty acid desaturase TERM 1450 1956040 - 1955995 - f 73 -9.8 -3.59979 | gap 3, overlap 1955996 1955999 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GCT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 1451 1956039 - 1955996 - f 73 -13.3 -2.75844 | gap 3, overlap 1955995 1955999 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GCT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 1452 1956034 - 1955999 - f 72 -14 -2.65354 | gap 1, overlap 1955996 1955995 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GCT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC TERM 1453 1956164 - 1956116 - f 79 -12.6 -3.53012 | opp_overlap 1956124 1956146, overlap 1956124 GGTTCCCCGCGCAAA CCTCAAAAGTCGGGGACG TTCAATGGACCTT CCTCCCCGACCTTTGAGG TCGGGCGCGCGCCTT TERM 1454 1956299 - 1956254 - f 73 -9.8 -3.59979 | gap 3, overlap 1956255 1956258 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GCT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 1455 1956298 - 1956255 - f 73 -13.3 -2.75844 | gap 3, overlap 1956254 1956258 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GCT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 1456 1956293 - 1956258 - f 72 -14 -2.65354 | gap 1, overlap 1956255 1956254 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GCT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC TERM 1457 1957756 - 1957773 + G 71 -8.3 -3.84712 | opp_overlap 1957741, overlap 1957769 CTGATCGCGCTGATC GGCGGCG TCGG CACCGCC TTTGGTCTCGGATTG Rcas_1534 1956805 - 1958178 + | PUCC protein Rcas_1535 1958194 - 1958991 + | methyltransferase type 11 Rcas_1536 1959149 - 1960393 + | light-independent protochlorophyllide reductase subunit N TERM 1458 1961677 - 1961658 - g 76 -7 -4.4017 | opp_overlap 1961667, overlap 1961660 CGAACTGGGACAAAA CGCCGCGC GCTG GCTCGACG AGCAGTTTGGCGTTC Rcas_1537 1961008 - 1962699 + | light-independent protochlorophyllide reductase subunit B Rcas_1538 1962720 - 1963541 + | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 1459 1963897 - 1963925 + G 100 -11.7 -4.63527 | overlap 1963898 GCGGATCACGTTCAC AGCCGGCGATATC GAG GATGTTGCCGGCG TTTTTGACGTGGTGG TERM 1460 1963898 - 1963924 + G 84 -15.2 -3.37634 | overlap 1963897 CGGATCACGTTCACA GCCGGCGATATC GAG GATGTTGCCGGC GTTTTTGACGTGGTG TERM 1461 1964005 - 1964027 + G 100 -12 -4.70659 | GCTCAGACATCTGGC GCAGCGTGCC CGC GGCATGTTGC TTTTTACCTATGCGC Rcas_1539 1963532 - 1964245 + | Mg-protoporphyrin IX methyl transferase Rcas_1540 1964474 - 1964803 + | hypothetical protein Rcas_1541 1964853 - 1965968 + | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 1462 1967514 - 1967494 - g 73 -11.1 -3.61398 | GCGTCGCCGGAAGAA CTGCGCCAC CTG GTGGTGCAG CACAATGCCGATCTC TERM 1463 1967637 - 1967658 + G 75 -2.9 -4.85129 | gap 1 CGCCGCTCCGGGCGA GTTGCTGACC GAT GGAC-GCGAC TTTTTCATCTGTGGT TERM 1464 1968478 - 1968489 + G 76 -5.8 -4.66987 | overlap 1968458 CTGGTGGACGAGTAC CGCA ATCG TGCG TTTTCTTCGCCTGTG Rcas_1542 1966051 - 1969902 + | magnesium chelatase TERM 1465 1970829 - 1970840 + G 70 -7.2 -4.02022 | overlap 1970803 1970794 ATCGGCGGCTCGATT GCCG CGAC CGGC TTTCTGCTGATTGCC Rcas_1543 1969932 - 1971233 + | PUCC protein TERM 1466 1971317 - 1971285 - g 70 -11.9 -3.11291 | opp_overlap 1971288, overlap 1971288 CTCAGAATGGCAAGA CGACCGACAGCGGCG TCA CAACGCTGCCGGTCT ATCCATTTACTGCGA Rcas_1544 1971248 - 1972381 + | magnesium chelatase ATPase subunit I Rcas_1545 1975265 - 1972431 - | DNA polymerase III, epsilon subunit TERM 1467 1973290 - 1973303 + g 72 -2.4 -4.72272 | CGCAGACGGTCGTGG GTCA GCCAGG TGAC TTTTTCCTCAGCGCC TERM 1468 1974388 - 1974347 - G 75 -12.1 -3.54424 | gap 1, overlap 1974348 1974350 TCGTATTGGTCGAAA TGACGACGC-GCTCGCCGCG GCG CGCGGCGTGTAGCGCCGCCG GAACCAGATACGCCA TERM 1469 1974387 - 1974348 - G 78 -15.6 -2.72511 | gap 1, overlap 1974347 1974350 CGTATTGGTCGAAAT GACGACGC-GCTCGCCGCG GCG CGCGGCGTGTAGCGCCGCC GGAACCAGATACGCC TERM 1470 1974385 - 1974350 - G 77 -14.6 -2.90813 | gap 1, overlap 1974348 1974347 TATTGGTCGAAATGA CGACGC-GCTCGCCGCG GCG CGCGGCGTGTAGCGCCG CCGGAACCAGATACG TERM 1471 1978397 - 1978413 + r 71 -8.7 -3.72009 | overlap 1978403 GGACGCAAGTTCCGT CTGCGTC GCT GATGCAG TTTCAGTGCTCTTCT TERM 1472 1978602 - 1978633 + r 71 -9.4 -3.72009 | gap 1, opp_overlap 1978596, overlap 1978603 TTCGGAAATCTGGCG GAGGCGATGGAC-GC CGC GCTGTCCATCGCCGG TTTCAGTGCTCTTCT TERM 1473 1980580 - 1980608 + r 76 -10.1 -3.72009 | overlap 1980601 1980603 CGGAAATACTACTGG CTGCTCGCGCGCG ATC CCCCCGCGCGCAG TTTCAGTGCTCTTCT TERM 1474 1981761 - 1981777 + r 71 -9.3 -3.72009 | opp_overlap 1981742 1981741, overlap 1981760 1981771 GCGCGCCATCGCCGC CGCGCGC GAG GCGCGGG TTTCAGTGCTCTTCT TERM 1475 1982063 - 1982036 - R 81 -15.6 -2.93783 | overlap 1982033 AAAATTCGGAAATTA TGGACGGCGATC AATC GATCGCCGTCCT CGTGAAAAGTTTCAG TERM 1476 1983050 - 1983062 + r 77 -4.1 -4.97402 | overlap 1983043 CTGCGAGCCGAAAAT TCGGA AAT TTCGA TTTTTGTCCATTTTG TERM 1477 1983718 - 1983756 + r 71 -8.9 -3.72009 | gap 2, opp_overlap 1983717 1983720, overlap 1983720 1983751 GAAAATTCGGAAATC GAGGGCGGGCGCGTCATCG GCG CGA--ATGCGCTCGCCCTG TTTCAGTGCTCTTCT TERM 1478 1983720 - 1983754 + r 74 -11.5 -3.43511 | gap 2, opp_overlap 1983717 1983720, overlap 1983718 1983751 AAATTCGGAAATCGA GGGCGGGCGCGTCATCG GCG CGA--ATGCGCTCGCCC TGTTTCAGTGCTCTT Rcas_1546 1986717 - 1985596 - | 3-isopropylmalate dehydrogenase Rcas_1547 1987622 - 1987146 - | hypothetical protein TERM 1479 1987217 - 1987185 - G 100 -8.4 -5.28176 | gap 1, overlap 1987186 CTGACCGAGAAAAAA GGTCAGCGCAACGAT GATT AGCGCTGCGCCG-CC GCCGGAAATCAGCAG TERM 1480 1987518 - 1987502 - G 81 -4.4 -5.0133 | opp_overlap 1987502 1987507, overlap 1987504 CACCTTTTGAAAAAA TGTCGC GTATG ACGACA TACGTTTCGATGGCG Rcas_1548 1988243 - 1987629 - | 3-isopropylmalate dehydratase, small subunit TERM 1481 1987889 - 1987902 + g 72 -3.7 -4.58283 | opp_overlap 1987898, overlap 1987898 CCTCGTCCGTCTGGA CGGTC AACA GCCCG TTTTTCAGGGCATTA Rcas_1549 1989751 - 1988333 - | isopropylmalate isomerase large subunit Rcas_1550 1990859 - 1989930 - | branched-chain amino acid aminotransferase TERM 1482 1990235 - 1990214 - G 74 -12.9 -3.29461 | overlap 1990215 TAATGCCGGGCAGAA GCGCCGCCG TCAC CGGCGGCGT ATAGATGACGCCGTC TERM 1483 1990234 - 1990215 - G 80 -16.4 -2.57463 | overlap 1990214 AATGCCGGGCAGAAG CGCCGCCG TCAC CGGCGGCG TATAGATGACGCCGT Rcas_1551 1992527 - 1990917 - | putative alpha-isopropylmalate/homocitrate synthase family transferase TERM 1484 1991837 - 1991871 + g 74 -12.1 -3.39803 | gap 1 ATCCTGCGCGCACGG CGGCAAGCGCGTTGGC GACT GCCAGCGCGCC-GTCG TTGTGGGTGTGGATG Rcas_1552 1993391 - 1992552 - | prephenate dehydratase Rcas_1553 1995288 - 1993618 - | 2-isopropylmalate synthase TERM 1485 1993918 - 1993945 + g 74 -10.6 -3.72576 | opp_overlap 1993933 1993934, overlap 1993930 1993934 1993941 GATCCCCTCAGTGAC CGCCTTGATCGA GAAT TCGATCAGGTCG TTTGGTCGCCCGACG TERM 1486 1994161 - 1994172 + g 74 -5.8 -4.51812 | CACCTCCAGGTCGCG GTCG TCGA CGAC TTTCTTCTTGTCGCA Rcas_1554 1995929 - 1995519 - | S23 ribosomal protein TERM 1487 1996019 - 1996059 + r 78 -13.2 -3.16267 | GTGTTGACCGTCTCA CGGCTGGAGTTGGCTTCG ACAGG CTCAGCCAGCGCCAGCCG TTCCATGTCCTTCGG Rcas_1555 1997259 - 1996237 - | ketol-acid reductoisomerase Rcas_1556 1998217 - 1997675 - | acetolactate synthase, small subunit Rcas_1557 1999981 - 1998236 - | acetolactate synthase, large subunit, biosynthetic type TERM 1488 1999959 - 1999970 + g 72 -7.2 -4.10657 | opp_overlap 1999954, overlap 1999932 TCGCACATCACCTGG GCGC CGGT GCGC TTTTCGGACATCTGA TERM 1489 2000220 - 2000265 + r 75 -7.7 -4.2528 | gap 2, opp_overlap 2000223 2000224, overlap 2000223 2000226 2000229 GCAGCATATGTCCAT AAACGGTA--AGCCCCTCCCG TGGGTT CGGGAGGGGCTCGTGTCGTTG TTTCTTGCGTTACGC TERM 1490 2000223 - 2000262 + r 79 -9.4 -4.2416 | gap 2, opp_overlap 2000223 2000224, overlap 2000220 2000226 2000229 GCATATGTCCATAAA CGGTA--AGCCCCTCCCG TGGGTT CGGGAGGGGCTCGTGTCG TTGTTTCTTGCGTTA TERM 1491 2000226 - 2000257 + r 76 -13.7 -3.10303 | opp_overlap 2000223 2000224, overlap 2000223 2000220 2000229 TATGTCCATAAACGG TAAGCCCCTCCCG TGGGTT CGGGAGGGGCTCG TGTCGTTGTTTCTTG TERM 1492 2000229 - 2000254 + r 84 -17.6 -2.74292 | opp_overlap 2000223 2000224, overlap 2000226 2000223 2000220 GTCCATAAACGGTAA GCCCCTCCCG TGGGTT CGGGAGGGGC TCGTGTCGTTGTTTC Rcas_1558 2001427 - 2000459 - | pyridoxal-5'-phosphate-dependent protein beta subunit Rcas_1559 2002507 - 2001446 - | homoserine dehydrogenase Rcas_1560 2002847 - 2003185 + | hypothetical protein TERM 1493 2003292 - 2003324 + F 89 -4.9 -5.24531 | overlap 2003295 GGGGTGAGTCTTTCG GACGCG-CAGGGCGT TTCTC ACTCCCTGACGC-TC TTTTTTCTCACCCCT TERM 1494 2003295 - 2003322 + F 75 -7.7 -4.25873 | gap 1, overlap 2003292 GTGAGTCTTTCGGAC GCG-CAGGGCGT TTCTC ACTCCCTGACGC TCTTTTTTCTCACCC TERM 1495 2004872 - 2004841 - g 74 -10 -3.71848 | gap 1, overlap 2004843 GCGTTGCAGGAAGAA GAGCGCGC-CCGCCG GGC CGCCGAAGCGCGCGC CGCCGAAGAAGAGCG TERM 1496 2004872 - 2004843 - g 76 -12.7 -3.44284 | overlap 2004841 GTTGCAGGAAGAAGA GCGCGCCCGCCGG GCCG CCGAAGCGCGCGC CGCCGAAGAAGAGCG TERM 1497 2004914 - 2004883 - g 70 -10 -3.61398 | gap 1, overlap 2004885 CGCGCCGCCGAAGAA GAGCGCGC-CCGCCG GGC CGCCGAAGCGCGCGC CGCCGAAGAAGAGCG TERM 1498 2004914 - 2004885 - g 74 -12.7 -3.38812 | overlap 2004883 CGCCGCCGAAGAAGA GCGCGCCCGCCGG GCCG CCGAAGCGCGCGC CGCCGAAGAAGAGCG TERM 1499 2004958 - 2004925 - g 70 -10.1 -3.61398 | overlap 2004927 CGCGCCGCCGAAGAA GAGCGCGCCCGCCGG GCCG CCGAAGCGCGCGCTG TGGAAGCCGAGTCGC TERM 1500 2004956 - 2004927 - g 74 -12.7 -3.38812 | overlap 2004925 CGCCGCCGAAGAAGA GCGCGCCCGCCGG GCCG CCGAAGCGCGCGC TGTGGAAGCCGAGTC Rcas_1561 2004133 - 2005035 + | hypothetical protein Rcas_1562 2006271 - 2005093 - | S-adenosylmethionine synthetase Rcas_1563 2009836 - 2006276 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1501 2009845 - 2009865 + r 73 -4.5 -4.66609 | overlap 2009847 GCATCATTCAGGTAC CGTGCGCGC AAG GCGCATCCG TTTTTAGATACAGTA Rcas_1564 2010456 - 2009980 - | hypothetical protein Rcas_1565 2010735 - 2010466 - | hypothetical protein TERM 1502 2010848 - 2010827 - R 75 -2.8 -4.96848 | overlap 2010828 2010829 CTGCTCACAGAAAAA TGGCGCTG TGCGCT CTGCGCCG ATGCACGTTCTGCGC Rcas_1566 2011756 - 2011196 - | hypothetical protein Rcas_1567 2011958 - 2013151 + | GntR family transcriptional regulator Rcas_1568 2013176 - 2014882 + | thymidylate synthase complementing protein ThyX TERM 1503 2015241 - 2015187 - f 100 -19.2 -3.53224 | opp_overlap 2015179, overlap 2015208 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCGCAGCCAGGGC TTCAGCCCGCCGCGT TERM 1504 2015220 - 2015208 - f 78 -10.5 -3.86202 | overlap 2015187 GCTCAGGACATGAAA GCCCC AAA GGGGC TTGCACGACCGCAGC TERM 1505 2015645 - 2015587 - f 79 -13 -3.53224 | opp_overlap 2015577, overlap 2015588 2015610 GAGCTGCGGGCTAAA GCCCCCTTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGCAT CCGCCCGCCGCGCCG TERM 1506 2015644 - 2015588 - f 79 -16.5 -2.71791 | opp_overlap 2015577, overlap 2015587 2015610 AGCTGCGGGCTAAAG CCCCCTTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGCA TCCGCCCGCCGCGCC TERM 1507 2015622 - 2015610 - f 78 -10.5 -3.86202 | overlap 2015588 2015587 GCTCAGGACATGAAA GCCCC AAA GGGGC TTGCACGACCTCAGC TERM 1508 2015770 - 2015758 - f 78 -10.5 -3.86202 | overlap 2015753 GCTCAGGACATGAAA GCCCC AAA GGGGC TTGCACGACCTCAGC TERM 1509 2015918 - 2015906 - f 78 -10.5 -3.86202 | GCTCAGGACATGAAA GCCCC AAA GGGGC TGGCACGACCGCAGC TERM 1510 2016089 - 2016033 - f 74 -11.6 -3.53224 | gap 2, opp_overlap 2016023, overlap 2016034 2016051 GAGCTGCGGGCTAAA GCCCCCTTGCTCAGGACATGGAAGCCCC AAA GGGGCTTGCACGACCTCAGCCA-GGG-C TTCAGCCCGCCGCGC TERM 1511 2016090 - 2016034 - f 77 -14.3 -2.71791 | opp_overlap 2016023, overlap 2016033 2016051 AGCTGCGGGCTAAAG CCCCCTTGCTCAGGACATGGAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGCT TCAGCCCGCCGCGCC TERM 1512 2016293 - 2016235 - f 79 -13 -3.53224 | opp_overlap 2016225, overlap 2016236 2016258 GAGCTGCGGGCTAAA GCCCCCTTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGCAT CCGCCCGCCGCGCCG TERM 1513 2016292 - 2016236 - f 79 -16.5 -2.71791 | opp_overlap 2016225, overlap 2016235 2016258 AGCTGCGGGCTAAAG CCCCCTTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGCA TCCGCCCGCCGCGCC TERM 1514 2016270 - 2016258 - f 78 -10.5 -3.86202 | overlap 2016236 2016235 GCTCAGGACATGAAA GCCCC AAA GGGGC TTGCACGACCTCAGC TERM 1515 2016439 - 2016385 - f 100 -19.2 -3.53224 | overlap 2016406 GAGCTGCGGGCTAAA GCCCGTGCTCAGGACATGAAAGCCCC AAA GGGGCTTGCACGACCTCAGCCAGGGC ATCCGCCCGCCGCGC TERM 1516 2016418 - 2016406 - f 78 -10.5 -3.86202 | overlap 2016385 GCTCAGGACATGAAA GCCCC AAA GGGGC TTGCACGACCTCAGC TERM 1517 2016566 - 2016554 - f 78 -10.5 -3.86202 | overlap 2016562 GCTCAGGACATGAAA GCCCC AAA GGGGC TGGCACGACCGCAGC TERM 1518 2017206 - 2017240 + G 70 -12.9 -2.86164 | overlap 2017205 2017206 2017227 2017229 GACATCCTGCTTGGG CTGGCCGCCGC CGGGTTGTTTGGC GCGGCGGCCAG TCTGCTGGTTGCACG TERM 1519 2017476 - 2017503 + G 71 -12.6 -3.01712 | GCGCTCGCGCTGTTC GCGGCGCTGGCG ATTG CGCCGCCGCTGC TGTTCGCCGACCCGG Rcas_1569 2016681 - 2019101 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 1520 2019880 - 2019870 - g 73 -8.2 -4.0031 | opp_overlap 2019873, overlap 2019871 ATGGTCATCAAAGAA GCGC AGC GCGC AGCGACGTATCTGGC Rcas_1570 2019216 - 2020406 + | arsenite-activated ATPase ArsA Rcas_1571 2020440 - 2020757 + | hypothetical protein TERM 1521 2020780 - 2020816 + F 89 -16 -3.29263 | gap 1, overlap 2020783 2020784 GTCTGAGGCATATCC GCGA-GTGGGTGCACGG CATG CTGTGCACCCACATTGC TTATGCGACGCCTCT TERM 1522 2020783 - 2020812 + F 90 -14.3 -3.44146 | overlap 2020780 2020784 TGAGGCATATCCGCG AGTGGGTGCACGG CATG CTGTGCACCCACA TTGCTTATGCGACGC TERM 1523 2020784 - 2020811 + F 85 -17.8 -2.66274 | overlap 2020783 2020780 GAGGCATATCCGCGA GTGGGTGCACGG CATG CTGTGCACCCAC ATTGCTTATGCGACG Rcas_1572 2021006 - 2021758 + | electron transport protein SCO1/SenC Rcas_1573 2021935 - 2022105 + | hypothetical protein Rcas_1574 2022102 - 2022608 + | cytochrome c oxidase subunit II Rcas_1575 2022658 - 2024343 + | cytochrome c oxidase subunit I TERM 1524 2024484 - 2024520 + F 100 -25.9 -3.60296 | overlap 2024487 TCTCGGGGGGCGGTG CAGCGCGCGGGCAGGTC TCA GACCTGCCCGCGCGTGG TTTGAAATCAGGGTA TERM 1525 2024487 - 2024517 + F 100 -28.4 -2.92613 | overlap 2024484 CGGGGGGCGGTGCAG CGCGCGGGCAGGTC TCA GACCTGCCCGCGCG TGGTTTGAAATCAGG TERM 1526 2025452 - 2025479 + G 83 -5.4 -5.03994 | overlap 2025445 CACGCGCCCGCTGAT CCAGTCGTTCCG TGCG CCGACCGACGGG TTTTTCTATGTGCGG Rcas_1576 2024700 - 2026982 + | peptidase domain-containing protein Rcas_1577 2027037 - 2027396 + | XRE family transcriptional regulator TERM 1527 2027592 - 2027567 - gT 77 -14.7 -2.70932 | opp_overlap 2027590, overlap 2027569 TGCCTGCGCCAACCA CAGCGCCGCCG ACTG CGACAGCGCTG CCGCGCGGCGGCAAT Rcas_1578 2027368 - 2029155 + | extracellular solute-binding protein Rcas_1579 2029928 - 2029200 - | two component LuxR family transcriptional regulator Rcas_1580 2030983 - 2029934 - | histidine kinase TERM 1528 2030149 - 2030179 + g 76 -8.2 -4.12901 | overlap 2030151 CTGAGCGATATGCCA GACGCACGGTGATC GGC GATCCACGTGCGTA TTTGTGTGCATTTTG TERM 1529 2030151 - 2030177 + g 73 -10.8 -3.64364 | overlap 2030149 GAGCGATATGCCAGA CGCACGGTGATC GGC GATCCACGTGCG TATTTGTGTGCATTT Rcas_1581 2031407 - 2031153 - | hypothetical protein TERM 1530 2031539 - 2031497 - H 73 -9.9 -3.59979 | overlap 2031498 2031501 TTCGCTCAGGGTAAA CGCAGCGAGGAATCTGA-GCG GGT CGCGCCAGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 1531 2031538 - 2031498 - H 73 -13.4 -2.75844 | overlap 2031497 2031501 TCGCTCAGGGTAAAC GCAGCGAGGAATCTGA-GCG GGT CGCGCCAGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 1532 2031536 - 2031501 - H 76 -14.8 -2.65354 | gap 1, overlap 2031498 2031497 CTCAGGGTAAACGCA GCGAGGAATCTGA-GCG GGT CGCGCCAGACCCCTCGC GCTGCTCGGGGTGAC Rcas_1582 2032021 - 2032626 + | bacteriochlorophyll 4-vinyl reductase TERM 1533 2032730 - 2032756 + G 85 -10 -4.27316 | ACCGCCGCATCCATC TCGCCCGATGCG TCA CGCGCCGCGCGA TTTTGCGTTGACGCC TERM 1534 2033290 - 2033280 - g 71 -4.6 -4.46212 | opp_overlap 2033280 CTGCTTACCACAAAA CAGG TCG CCCG CTGGAGCCTGTTCTT Rcas_1583 2032707 - 2033801 + | radical SAM domain-containing protein TERM 1535 2034078 - 2034061 - g 71 -9.1 -3.75015 | gap 1, overlap 2034050 ACAAGGCGCAGGAAA CGCTGCGC CTG GCGC-GCG AAGCCAATCCTGGCT Rcas_1584 2033814 - 2035397 + | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 1536 2035567 - 2035589 + F 74 -11.3 -3.41962 | gap 1, overlap 2035565 GAAAACTTTTATCGG GGCGCGGTCA CGAC TG-CCGCGCC TATTGTCTGTTGGAG Rcas_1585 2035612 - 2037090 + | zeta-phytoene desaturase Rcas_1586 2037472 - 2038305 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein Rcas_1587 2040855 - 2039956 - | intradiol ring-cleavage dioxygenase TERM 1537 2040569 - 2040605 + g 85 -14.6 -3.65522 | CACGCCGGAACCGGC CTGCTGCCGATAGCC-GC GGG GCTGGCTGTCGGCA-CAG TTGTTGCAATCACTG Rcas_1588 2041273 - 2043000 + | L-lactate transport Rcas_1589 2043870 - 2043025 - | ABC-3 protein Rcas_1590 2044685 - 2043897 - | ABC transporter related TERM 1538 2044644 - 2044592 - G 72 -7.6 -4.12738 | gap 1, overlap 2044594 2044597 CCACACGAAATGAAA TATCATCGAGCACCC-TCCGTCGCC CATA GGCGACGGTCAGGCGCTCGATCTCC AGGTGCGCCGGTTCG TERM 1539 2044642 - 2044594 - G 75 -12.4 -3.65143 | gap 1, overlap 2044592 2044597 ACACGAAATGAAATA TCATCGAGCACCC-TCCGTCGCC CATA GGCGACGGTCAGGCGCTCGATCT CCAGGTGCGCCGGTT TERM 1540 2044639 - 2044597 - G 90 -18.5 -2.92386 | gap 1, overlap 2044594 2044592 CGAAATGAAATATCA TCGAGCACCC-TCCGTCGCC CATA GGCGACGGTCAGGCGCTCGA TCTCCAGGTGCGCCG Rcas_1591 2046175 - 2044682 - | periplasmic solute binding protein TERM 1541 2045293 - 2045305 + g 83 -7.7 -4.60041 | AGCCGCTCAATTTCA GGAGA TAC TCTCC TTTTTCCACATCCAT TERM 1542 2045491 - 2045469 - G 81 -7.6 -4.4009 | overlap 2045471 TCCCATTTGAGAAAA CCGGCATACG TCC CGTCTGCCTG CTGGGTCAGCGCCAC TERM 1543 2046543 - 2046594 + G 73 -6.7 -4.36914 | gap 2, overlap 2046544 TACAACGTCAGGTAT TGGTGGCGC--TGTTTCGTGAGGAG TTGG TTTCTCATGAAGCGCTGCGCCGCCG TTTTATCGCCGAGGC TERM 1544 2047438 - 2047416 - g 95 -11.3 -4.42386 | gap 1, opp_overlap 2047415 TTGTGATGGAGAAAA CGC-GCCAGC ATTC GCTGGCAGCG CTCATTGCAATGGTG Rcas_1592 2046416 - 2047831 + | serine/threonine protein kinase Rcas_1593 2047943 - 2048689 + | silent information regulator protein Sir2 TERM 1545 2049308 - 2049332 + G 71 -8.5 -3.89215 | overlap 2049298 CTGCGTCGGAACGGT CGGCGCGATTG AAC CGGTTGCGTCG TTTCCGTTTGTGGCG Rcas_1594 2048736 - 2049515 + | silent information regulator protein Sir2 Rcas_1595 2049537 - 2050157 + | GCN5-related N-acetyltransferase TERM 1546 2050543 - 2050573 + G 70 -11.9 -3.20901 | gap 1 TATCCATTTACGCTC GATGCCGACATGCG CAGC CGCGTG-CGGCGTC TTCCGTTGCTCGGAT Rcas_1596 2050150 - 2050800 + | hypothetical protein TERM 1547 2050849 - 2050821 - T 100 -24.7 -2.87132 | opp_overlap 2050821 GCGCGGTGGGAGATA GTCAGGGCGACCC ATC GGGTCGCCCTGAC TGGTTGGGGCGGAGC TERM 1548 2050821 - 2050849 + T 100 -24.7 -2.70932 | opp_overlap 2050821 GCGCGGTGGGAGATA GTCAGGGCGACCC ATC GGGTCGCCCTGAC TGGTTGGGGCGGAGC Rcas_1597 2055711 - 2051203 - | DNA-directed RNA polymerase, beta' subunit TERM 1549 2054553 - 2054566 + g 74 -5.2 -4.67353 | overlap 2054536 2054550 CCTCCACCACCCGCA GGCG CTTCGT CGCC TTTTTGCGTCGCTGA TERM 1550 2055783 - 2055749 - R 100 -21.5 -3.06696 | overlap 2055751 TGTGCCGGCAACACA CACCCTCCCGCAGGC TCCTG GCATGCGGGAGGGTG GGACCGACAGGCGCT TERM 1551 2055781 - 2055751 - R 89 -18.3 -3.09273 | overlap 2055749 TGCCGGCAACACACA CCCTCCCGCAGGC TCCTG GCATGCGGGAGGG TGGGACCGACAGGCG Rcas_1598 2059535 - 2055798 - | DNA-directed RNA polymerase, beta subunit TERM 1552 2057802 - 2057792 - G 71 -8.2 -3.95584 | overlap 2057793 CGCGCAGCAACGAAA CCGC AAT GCGG CGCGCCACGGCGGCA Rcas_1599 2060813 - 2059827 - | hypothetical protein Rcas_1600 2061182 - 2060967 - | hypothetical protein TERM 1553 2061669 - 2061723 + r 72 -11 -3.36327 | GGCCCGGCTCTGGCC GGCGCGGGCCAGGGCCTCCACGGCGC GCA GCGCCTCGGAAGAGCCGGCCAGCCCC TTGTCCGTGGCGTCC TERM 1554 2062890 - 2062942 + r 79 -9 -4.19624 | opp_overlap 2062881 2062880, overlap 2062891 GAAAAGGCGGCAGGC TCTCG-CCGCAGCAGCGCCAGGGCCA GGA TGGCCTCGGCGC-GCTGCAGTCCCGG TTTGTCTTCGGCCTG Rcas_1602 2066066 - 2063058 - | signal transduction protein TERM 1555 2063438 - 2063415 - G 74 -13.8 -2.96216 | TTCCACCAGCAGAGA CGCCTCCTCC CTGC GGTGGAGGCG GGCAAGAGCGGCGCT TERM 1556 2065088 - 2065065 - G 77 -13.8 -3.28712 | CTTCCGGTCGGAGAA GAGGCGCGGG CGGT CCCGCTCCTC CAGGGCGGGCATGAG Rcas_1603 2066567 - 2066112 - | hypothetical protein Rcas_1604 2067188 - 2066571 - | peptidase C14, caspase catalytic subunit P20 TERM 1557 2066960 - 2066982 + g 76 -9.8 -3.85698 | opp_overlap 2066915 2066912, overlap 2066961 2066963 GCCCGGCCAGCCAGG CCAGGCCGTC GAG GATGGCCTGC TTTGTGGCGCCGGCG TERM 1558 2066961 - 2066981 + g 70 -13.3 -2.91276 | opp_overlap 2066915 2066912, overlap 2066960 2066963 CCCGGCCAGCCAGGC CAGGCCGTC GAG GATGGCCTG CTTTGTGGCGCCGGC Rcas_1605 2069791 - 2067227 - | AAA family ATPase TERM 1559 2067529 - 2067555 + g 77 -2.2 -5.00616 | gap 1, opp_overlap 2067516, overlap 2067525 2067532 CAGTCCCCGGTGCAA CGACCGGAGCG GTGTAG CTCTCTGG-CG TTTTTTGCCGGGCGC TERM 1560 2067739 - 2067765 + g 73 -10.9 -3.55622 | gap 1 GCCGCCCGGTGACCA GCGGTTCGC-CA GGGG TGCGCGAGCCGC TTTCGGCCAGTTGCC TERM 1561 2069833 - 2069889 + r 91 -13.7 -3.98842 | TGGGACACGGATTTT CACGGATGCGACGGATCGTCACGGATT TAT AGTCCGTGTTCGTCTGTCGAATCCGCG TTTATCCATGTTCTA Rcas_1606 2071069 - 2069909 - | putative transcriptional regulator Rcas_1607 2073798 - 2071069 - | SMC domain-containing protein TERM 1562 2071279 - 2071296 + g 73 -3.3 -4.80167 | overlap 2071271 ATTGGGATTGTGGGT CGCCGCA ATGA TCTGGCG TTTTCCTTTTTGCTC TERM 1563 2072598 - 2072587 - G 76 -5.8 -4.56597 | TCGCTGCCCGAAAAA GAGG GGCG CCTC ACGTTCACCCAAAAC TERM 1564 2073071 - 2073083 + g 80 -4.8 -4.84761 | opp_overlap 2073055 GTGGCGCGCGGCGCA CCCT CCGAA AGGG TTTTTGTCCCAATCT TERM 1565 2073556 - 2073531 - G 72 -2.5 -4.72007 | overlap 2073533 TCCCACCAAAAGAAA GCTCCACGCCT GGAT AGACGTAAATC CCCGCCTTTTTTGCT Rcas_1608 2077702 - 2073863 - | hypothetical protein TERM 1566 2074013 - 2074050 + g 100 -9.7 -5.00616 | gap 1, opp_overlap 2073993, overlap 2074017 GCTCTGGCCGAATCC GCTCTCGGACAGGCGCTG CAC CAGCGCC-GACCGGTCGC TTTTTTCCCACAGGC TERM 1567 2074491 - 2074479 - G 79 -9.1 -4.24342 | GCGGCGATGAAGAAA TCGGC CCC GCCGA TGCCCTCCTCCCACA TERM 1568 2075530 - 2075545 + g 78 -4.6 -4.72272 | overlap 2075513 2075529 CCACGCCCCAGGCGG CGCGCA GTTG TTCGCG TTTTTCCTGCAGGGC TERM 1569 2075676 - 2075651 - G 83 -12.5 -3.85698 | opp_overlap 2075651, overlap 2075655 CCCCTCTCCCATAAA GGGAGAGGGGG TGAG CCTCCCCTCCC CCTTCATGGGGGAGG TERM 1570 2076290 - 2076319 + g 83 -12.8 -3.85698 | opp_overlap 2076289 2076290, overlap 2076289 CCCCTCTCCCACAAG GGGAGAGGGGGG AATCTG CCCCCCTCCTCC TTTATGGGGAAGGGG TERM 1571 2076415 - 2076384 - G 77 -13.7 -3.29263 | gap 1 AGAGGCTGGGTATAA CGCCCCCCTCCCCC ATGAA GGGGGAGG-GGCCG GGGGTGGGGGTAAGC TERM 1572 2076450 - 2076470 + g 83 -7.5 -4.63218 | AACGCTCGGTGTACC TCTTCCAGC GCC GCAGGGAGA TTTTGTTCGACCAGG TERM 1573 2076541 - 2076552 + g 74 -5.8 -4.51799 | overlap 2076532 2076531 2076548 GCAGCCGCTGACGCT CTGC ATCG GCAG TTTTCTGGCTTTCGT TERM 1574 2077098 - 2077147 + g 79 -9.3 -4.15044 | gap 1, overlap 2077079 2077076 TCGGCCGGAGCGGGT TCGTTCCAGCCGAAAGCCATTTGC CCG GCGGG-GGCTTTCTGCCGGGATGA TTTCTTGCGCCACAA Rcas_1609 2081088 - 2077699 - | helicase domain-containing protein TERM 1575 2078177 - 2078192 + g 74 -10.4 -3.74519 | TCCAGCGTCAACTGG CGCTCG CGCT CGAGCG TTTCCTGCAGGTCTT TERM 1576 2078913 - 2078893 - G 78 -6.7 -4.59773 | overlap 2078894 2078897 CTCCAGGGTGAAAAA GCCACGGCG GCG CACCTCGGC GCGCGGGCGCATCTC TERM 1577 2078943 - 2078969 + g 81 -15.2 -3.07344 | overlap 2078914 CGCCACCCAGGTGCT CCCAGGCTTTCT GGA AGAACGCCTGGG TATATTCGGGGATCA Rcas_1610 2082197 - 2081493 - | hypothetical protein TERM 1578 2081709 - 2081664 - G 74 -9.5 -3.85817 | gap 1 ACGCCCCTTGAGAAA GGGC-CGCTGCAGGATGGCATG GAT CTTGCCCGCCAGCAGCGAGGCC CGGTCGTGGTGCTGC Rcas_1611 2082835 - 2082194 - | hypothetical protein TERM 1579 2082509 - 2082494 - G 81 -10.4 -4.23781 | overlap 2082489 GTGATGAAAAGCAAA GACGCC CAGC GGCGTC TCCCACTGCCCCGGC TERM 1580 2082780 - 2082796 + g 70 -12.3 -3.14211 | opp_overlap 2082794 CCGGCCAGCAGCAGT CCGGTCT CAA AGACCGG TTCATCGCCCACGAT Rcas_1612 2083442 - 2082822 - | hypothetical protein Rcas_1613 2084730 - 2083360 - | hypothetical protein Rcas_1614 2085590 - 2084730 - | hypothetical protein Rcas_1615 2086022 - 2085663 - | hypothetical protein Rcas_1616 2086590 - 2086000 - | NUDIX hydrolase Rcas_1617 2088651 - 2086594 - | shikimate/quinate 5-dehydrogenase TERM 1581 2086631 - 2086653 + g 74 -2.5 -4.86001 | overlap 2086638 ATCCCGAGTTGACGA CGTCGCTCG TCCGC CAGGCGTCG TTTTTCTGCGATCAT Rcas_1618 2091711 - 2089444 - | hypothetical protein TERM 1582 2089611 - 2089569 - G 74 -12.1 -3.53091 | gap 2 ATCCCTGTCGCCAAA GCATCGCTGCGCCGGCCGCTG CAC CAACGGC-GAC-CAGCCATGC AGAGAACATCAACCA TERM 1583 2089830 - 2089799 - G 91 -9.4 -4.46233 | gap 1 GCAAGCGGAAAGAAA CCGTAGTGTTGCCGG AGT CCGGCATC-CCACAG GGTGCGCCACAACAC TERM 1584 2091507 - 2091485 - G 71 -4.6 -4.46112 | overlap 2091457 GTCCAGCGAAACAAA CCGACCGCCG CCT CTTCGGGCGG AAACATGCCGCGCAC Rcas_1619 2091824 - 2093638 + | GTP-binding protein LepA Rcas_1620 2093683 - 2094696 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1585 2094734 - 2094779 + G 74 -14 -2.87211 | gap 1, overlap 2094736 CGGCGATCCGGGCTT GATCACGCGCGCGGCGTGGGA GATGA TTTC-CGCAGCGCGCGTGCTC TATCTGCGCACCGCT TERM 1586 2096085 - 2096101 + G 78 -10.1 -4.08064 | opp_overlap 2096077 2096078, overlap 2096100 GCGGAAAGTGCGTTG CGCGCAG CGG TTGCGCG TTTTCGGCGCCGCTT Rcas_1621 2094693 - 2096213 + | MazG family protein Rcas_1622 2096200 - 2096448 + | hypothetical protein Rcas_1623 2096543 - 2097937 + | hypothetical protein Rcas_1624 2097953 - 2098798 + | band 7 protein Rcas_1625 2099568 - 2098786 - | TPR repeat-containing protein TERM 1587 2099624 - 2099640 + r 76 -6.5 -4.4768 | TCATATCAGGAGGTT GTGACAG CAA CCGTCAC TTTGTTATCTTCCTA Rcas_1626 2100949 - 2099645 - | glycosyl transferase group 1 Rcas_1627 2102250 - 2100952 - | glycosyl transferase group 1 Rcas_1628 2102352 - 2103071 + | 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Rcas_1629 2103540 - 2104376 + | PP-loop domain-containing protein Rcas_1630 2105581 - 2104916 - | hypothetical protein TERM 1588 2105082 - 2105066 - G 74 -10.1 -3.72576 | CCTGGCTTCAGCAAA TGCGCCG GCG CGACGCA GCAGATCCGCCGGGA TERM 1589 2106029 - 2106019 - H 73 -4.6 -4.62336 | ACTTCACTGCAAAAA GCGG TAA CCAC GAAGGTTGCAAAAGA TERM 1590 2106126 - 2106138 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1591 2106339 - 2106351 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1592 2106552 - 2106564 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1593 2106765 - 2106777 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1594 2106978 - 2106990 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1595 2107191 - 2107203 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1596 2107404 - 2107416 + H 89 -10.5 -4.57353 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCTGTCCTCAGC TERM 1597 2107617 - 2107629 + H 84 -10.5 -4.21194 | TCATCATTCTCACCA GCCCC GCA GGGGC TTTTCCGTCCTCAGC Rcas_1631 2107875 - 2108945 + | basic membrane lipoprotein Rcas_1632 2109168 - 2110283 + | inner-membrane translocator Rcas_1633 2110295 - 2111335 + | inner-membrane translocator TERM 1598 2111906 - 2111929 + G 100 -13.2 -5.27335 | gap 1 CCATTATTCGCTCAT TGACCG-CGCG GGG CGCGTCGGTCA TTTTTATTTCGCACA Rcas_1634 2111332 - 2112915 + | ABC transporter related Rcas_1635 2114273 - 2112906 - | nicotinic acid phosphoribosyltransferase-like protein TERM 1599 2113087 - 2113117 + g 100 -5.2 -5.40072 | overlap 2113088 ACACCGTAAATGTCC ACCGGCACTCCAAG TTC CTCGAAGCGCCGGA TTTTTTTCGGACCAA TERM 1600 2113088 - 2113116 + g 71 -8.7 -3.83561 | overlap 2113087 CACCGTAAATGTCCA CCGGCACTCCAAG TTC CTCGAAGCGCCGG ATTTTTTTCGGACCA TERM 1601 2114409 - 2114425 + H 74 -3.6 -4.74103 | opp_overlap 2114411, overlap 2114395 GGCCGTCTCACGAAC AAGCCG CGTGA CGGCTC TTTTTGCCTTCGGCA Rcas_1636 2114585 - 2114827 + | hypothetical protein Rcas_1637 2114811 - 2115179 + | hypothetical protein Rcas_1638 2115516 - 2115770 + | hypothetical protein Rcas_1639 2116266 - 2115730 - | hypothetical protein Rcas_1640 2117209 - 2116268 - | hypothetical protein TERM 1602 2116530 - 2116546 + g 72 -13.7 -2.76263 | overlap 2116528 2116529 CGCCCCGGCGTTACG CCGACGG TCG CCGTCGG TCGTTCGATGGTCAC TERM 1603 2116789 - 2116771 - G 74 -2.3 -4.93877 | overlap 2116754 CGGCAGCAAAGAAAA CAAACCG CGTGC CGGGTCG TCCTGTGGCAGGGAA Rcas_1641 2119537 - 2117216 - | AAA-4 family protein TERM 1604 2119642 - 2119660 + H 71 -8.8 -3.77775 | overlap 2119641 AAATACCAGGGCTTT CGTGACGA CGA TCGTCTCG TTATCTTCATATTTC Rcas_1642 2119980 - 2120315 + | hypothetical protein Rcas_1643 2121132 - 2120335 - | HAD family hydrolase Rcas_1644 2123064 - 2121142 - | arginyl-tRNA synthetase TERM 1605 2123571 - 2123604 + G 70 -11.7 -3.1552 | opp_overlap 2123571, overlap 2123569 2123574 CGCTCCAAAATGACA TTGGTGGCGCTTGTG CTTG CGCTAGCGCCACTGA TCTTCGTGAGTGCGC TERM 1606 2123574 - 2123601 + G 72 -13.4 -2.77999 | opp_overlap 2123571, overlap 2123571 2123569 TCCAAAATGACATTG GTGGCGCTTGTG CTTG CGCTAGCGCCAC TGATCTTCGTGAGTG TERM 1607 2125113 - 2125155 + G 71 -12.8 -3.01712 | gap 1 GTGATTATCAGCGAC GTGGCGCC-GCACAGCG CACCGGCCAA TGCTGTGCAGGCGCCGC TGTTCGGACGCGAGA TERM 1608 2126158 - 2126137 - g 78 -15.9 -2.80816 | TTCGCAGCGATCATA CCCGCAACG CCGG CGTTGCGGG TGAGCAGGCTGTCCA Rcas_1645 2123493 - 2126213 + | multi-sensor signal transduction histidine kinase Rcas_1646 2126210 - 2127385 + | response regulator receiver sensor signal transduction histidine kinase Rcas_1647 2128802 - 2127360 - | cell cycle protein Rcas_1648 2129860 - 2128778 - | translation-associated GTPase TERM 1609 2129642 - 2129591 - G 70 -13 -2.87132 | gap 1, overlap 2129613 CGCGCCGCTGATATA GTTGAGCA-CGGCCGGCGGAAGACC GCC GCTCTCGCGCGCGCCGCTGCTCAAC CCGCCAATGTCGATA TERM 1610 2130022 - 2129983 - R 100 -25 -2.97747 | GGCGGACAGCACACA CCCCCCGTCCTTCTCCCG CAGG CGGGAGAGGGGCGGGGGG GAAGGTGTGCGTCCC Rcas_1649 2130571 - 2130122 - | ferric uptake regulator family protein Rcas_1650 2130710 - 2131360 + | hypothetical protein Rcas_1651 2131461 - 2132153 + | NUDIX hydrolase Rcas_1652 2132171 - 2132416 + | hypothetical protein TERM 1611 2133167 - 2133145 - g 75 -14.2 -2.80816 | CTGGCATTCAGTACA CGCCGACTAT GGG ACAGTCGGCG ATGGAACGGGCGGAT TERM 1612 2134784 - 2134798 + G 73 -6.4 -4.3739 | CGGGCATCCGGGTAG TCGTCA CTA TGGCGA TTTTGTGCAACCCTG Rcas_1653 2132463 - 2134946 + | peptidase S45 penicillin amidase TERM 1613 2135245 - 2135231 - g 76 -5.6 -4.57073 | opp_overlap 2135231, overlap 2135233 2135242 CAGGTCGGTGAAAAA CGCGCC GAG AACGCG GCATGGTTCTATGCC Rcas_1654 2134943 - 2135440 + | hypothetical protein Rcas_1655 2136275 - 2135409 - | inosine guanosine and xanthosine phosphorylase family protein TERM 1614 2135522 - 2135559 + g 91 -18.5 -3.21099 | gap 1 CGGCATCGAGCACTT CCTGGTGATTGGCGGGCG GTC CGTCCGCCAG-CGCCAGG TTGGTGATCAGCGAA Rcas_1656 2137006 - 2136317 - | membrane-flanked domain-containing protein Rcas_1657 2137793 - 2136993 - | DNA repair protein RecO Rcas_1658 2139112 - 2137895 - | queuine tRNA-ribosyltransferase Rcas_1659 2140718 - 2139204 - | hypothetical protein Rcas_1660 2141355 - 2140753 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_1661 2143113 - 2142358 - | DSBA oxidoreductase TERM 1615 2143589 - 2143620 + G 71 -5.8 -4.30576 | gap 1 GAAGAGATCGATCCG GCGCGCTTTTTGCCC TTT GGG-AAATCGTGCGC TTTTCGTCGTGAGGC Rcas_1662 2143157 - 2144194 + | glycosyl transferase family protein Rcas_1663 2144827 - 2144150 - | phosphatidylserine decarboxylase-related Rcas_1664 2145408 - 2144872 - | 16S rRNA processing protein RimM Rcas_1665 2145640 - 2145413 - | RNA-binding protein Rcas_1666 2145928 - 2145647 - | ribosomal protein S16 Rcas_1667 2147292 - 2145958 - | signal recognition particle protein TERM 1616 2147334 - 2147320 - R 100 -9.2 -5.08824 | TCTTCACGCAAAAAA GCGGCG CTT CACCGC TCTAACCTGCACATT Rcas_1668 2148978 - 2147527 - | hypothetical protein TERM 1617 2148918 - 2148895 - G 79 -8.2 -4.33851 | AAATGTGAGAATAAA GATTGGCACA AGAA TACGCCAATC GGTCAGTGTGTCGTT Rcas_1669 2150128 - 2149112 - | ABC transporter related Rcas_1670 2150390 - 2151466 + | cell shape determining protein MreB TERM 1618 2152273 - 2152303 + GF 86 -12.5 -3.92075 | gap 1, opp_overlap 2152260 2152272 2152273 AACGGTGCAGGAAAC CGGGCGCGAGC-GG ATTG CCAGCGTGCGCCCG TTTGTCGATCCGGAT Rcas_1671 2151479 - 2152369 + | rod shape-determining protein MreC Rcas_1672 2152333 - 2152872 + | hypothetical protein TERM 1619 2154667 - 2154698 + G 81 -4.4 -5.05113 | gap 1 CAACGGCAAGATCGA TGTTCGTCAGGCGCT GAA GGTGTC-GTCGAACA TTTTCTTTATGTCGG Rcas_1673 2152862 - 2155561 + | peptidoglycan glycosyltransferase TERM 1620 2155790 - 2155802 + G 70 -10.5 -3.66018 | CGGCGTGATGCCTGG CGGCG CAG CGCCG TTGTTCCCCTACTGG Rcas_1674 2155578 - 2155886 + | hypothetical protein TERM 1621 2156115 - 2156073 - T 73 -9.9 -3.59979 | overlap 2156074 2156077 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCA GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 1622 2156114 - 2156074 - T 73 -13.4 -2.75844 | overlap 2156073 2156077 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCA GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 1623 2156112 - 2156077 - T 76 -14.8 -2.65354 | gap 1, overlap 2156074 2156073 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCA GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_1675 2156561 - 2156175 - | PilT domain-containing protein Rcas_1676 2156794 - 2156558 - | hypothetical protein TERM 1624 2157455 - 2157465 + G 71 -8.2 -3.88291 | GGGCCCAGCGTGTTT GGGC CTT GCCC TTTCTGACCGTCCTG Rcas_1677 2157004 - 2158362 + | hypothetical protein Rcas_1678 2160434 - 2158350 - | hypothetical protein Rcas_1679 2161118 - 2160735 - | hypothetical protein Rcas_1680 2162050 - 2161115 - | type II secretion system protein Rcas_1681 2163047 - 2162064 - | type II secretion system protein TERM 1625 2162795 - 2162853 + g 74 -13.2 -3.39327 | gap 4 TCACCGTCAATTTCA GGTC--GGCGCGCGCCAGGTTGC-GCTGCG TCT CGCTGCCGC-GCTTGCCGCGCGCCACGACC TTATCGATCTCGCGC Rcas_1682 2164589 - 2163192 - | type II secretion system protein E Rcas_1683 2165908 - 2164616 - | response regulator receiver protein TERM 1626 2164885 - 2164897 + g 79 -9.1 -4.15044 | overlap 2164869 CGACGCGCATACCGA GCCGA TTA TCGGC TTTGTTCAGCACCAG TERM 1627 2164899 - 2164917 + g 88 -3.8 -5.27477 | overlap 2164901 AGCCGATTATCGGCT TTGTTCAG CAC CAGAACGA TTTTTTCCTTGGGAT TERM 1628 2165958 - 2165990 + r 71 -6.8 -4.25053 | overlap 2165961 TTGCGTGCTACACCC GTTGCCCGGAGGTG GGGCG CACCCCCCGGCTGC TTATTTGTATTATAC Rcas_1684 2167173 - 2166163 - | SAF domain-containing protein TERM 1629 2167325 - 2167286 - R 88 -19.6 -2.89668 | overlap 2167291 CAATATCTTGACAGA TCGAACGTTGAACGTTCC AGGC GAAACGTTCAACGTTCAA CCAACTAGCGCATGA TERM 1630 2167320 - 2167291 - R 85 -15.9 -3.15999 | overlap 2167286 TCTTGACAGATCGAA CGTTGAACGTTCC AGGC GAAACGTTCAACG TTCAACCAACTAGCG Rcas_1685 2169882 - 2167330 - | kelch repeat-containing protein TERM 1631 2169913 - 2169961 + r 79 -14.6 -2.8547 | gap 1, opp_overlap 2169914 2169916, overlap 2169930 TAATACAGACACAAA ACGCCAGGG-TGCGGAGACGTTG CATG CAACGTCTTCGCACCCCAGTCGC TATGCTGTGCAACGT TERM 1632 2169960 - 2169914 - R 100 -20.3 -4.67354 | gap 1, opp_overlap 2169913 2169930, overlap 2169916 AATACAGACACAAAA CG-CCAGGGTGCGGAGACGTTG CATG CAACGTCTTCGCACCCCAGTCG CTATGCTGTGCAACG TERM 1633 2169957 - 2169916 - R 100 -21.7 -2.62187 | opp_overlap 2169913 2169930, overlap 2169914 TACAGACACAAAACG CCAGGGTGCGGAGACGTTG CATG CAACGTCTTCGCACCCCAG TCGCTATGCTGTGCA Rcas_1686 2172488 - 2170008 - | von Willebrand factor type A TERM 1634 2172585 - 2172617 + r 73 -13.4 -2.81815 | overlap 2172582 GTCGGTATCGGGTTG CGCCCGGCGAAG CGGAAGGGA CTCCGCCGGGCG TGGTTGATGCTTACG Rcas_1687 2174382 - 2172628 - | PA14 domain-containing protein Rcas_1688 2174941 - 2174414 - | TadE family protein TERM 1635 2174560 - 2174544 - G 76 -8 -4.37092 | overlap 2174545 2174548 ATCGTGTTGATAAAA CTGACG AGCGG CGTCAG CGGCTCGATCACATA Rcas_1689 2178272 - 2175078 - | hypothetical protein TERM 1636 2178307 - 2178287 - H 87 -16.9 -3.11192 | CAGATGATCACGTAA GGGCAGGTC TGA GACCTGCCC GCCCCGCACCCTGGC TERM 1637 2179504 - 2179487 - g 76 -9.8 -3.85817 | opp_overlap 2179485 2179497 ACGCGCCGTGATAAA CGGCGC AGTCCG GCGCCG CCGTTTACGACCAGC TERM 1638 2179536 - 2179551 + G 72 -3.9 -4.56597 | opp_overlap 2179535 CGTTGCAGCAGGAAG CCGGG CGCAAA CTCGG TTTTTCCGCCAAGCG TERM 1639 2181202 - 2181184 - g 81 -11.6 -3.92143 | GAAAACCGGGACAAA CGGCGCTG CAG CGGCGCCG CCAAAGAAACGGGGA Rcas_1690 2178719 - 2181229 + | DNA topoisomerase I TERM 1640 2181740 - 2181722 - f 70 -10.2 -3.54511 | ATAATGGAACGAGAA GGGCGCGA AAT TCGCGTCC TGGCGCGGCAATGAT Rcas_1691 2181774 - 2182442 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1641 2182939 - 2182918 - g 70 -7.2 -4.09739 | CGAACTGCGCGAAAA CCAGGGCA TCAACC TGCCCGGG GTCGAAGTCAGCGCA TERM 1642 2182992 - 2182973 - g 70 -7.8 -3.98826 | opp_overlap 2182975, overlap 2182975 GCATTAACCGACAAA GACCGCAG CGAC CTGCGGTT TGGTCTGGCGCATGG TERM 1643 2182975 - 2182990 + G 76 -10.4 -3.83205 | opp_overlap 2182975 2182973 ATTAACCGACAAAGA CCGCAG CGAC CTGCGG TTTGGTCTGGCGCAT TERM 1644 2182990 - 2182975 - g 70 -10.4 -3.58209 | opp_overlap 2182975, overlap 2182973 ATTAACCGACAAAGA CCGCAG CGAC CTGCGG TTTGGTCTGGCGCAT Rcas_1692 2182439 - 2183878 + | pyruvate kinase Rcas_1693 2184156 - 2184428 + | hypothetical protein Rcas_1694 2184430 - 2185833 + | hypothetical protein TERM 1645 2186872 - 2186857 - T 89 -11.8 -4.15044 | opp_overlap 2186847 GGCTGCGCGAACAAA GGGCGC TGGT GCGCCC TGATGCCGTGTTGTC TERM 1646 2187275 - 2187304 + T 100 -13.1 -4.41348 | gap 1, opp_overlap 2187275 2187280 2187283, overlap 2187278 ACGCCCACCAGAGTA GCAGAGAATTGAGA CCT TCTCAATTCTC-GC TTTGTTTCGGGGCGG TERM 1647 2187278 - 2187302 + T 76 -14.5 -2.54371 | opp_overlap 2187275 2187280 2187283, overlap 2187275 CCCACCAGAGTAGCA GAGAATTGAGA CCT TCTCAATTCTC GCTTTGTTTCGGGGC TERM 1648 2187406 - 2187425 + T 100 -13.6 -5.27477 | opp_overlap 2187406 CGAACACGACGAAAA CTGGAGCG GCGT CGCTCCAG TTTTTTCATTGCGCT TERM 1649 2187425 - 2187406 - T 100 -13.6 -4.35461 | opp_overlap 2187406 CGAACACGACGAAAA CTGGAGCG GCGT CGCTCCAG TTTTTTCATTGCGCT Rcas_1695 2188829 - 2187594 - | extracellular solute-binding protein Rcas_1696 2189309 - 2190679 + | peptidase dimerisation domain-containing protein Rcas_1697 2192532 - 2190868 - | peptidase M9A collagenase domain-containing protein TERM 1650 2192026 - 2192002 - G 74 -12.8 -3.33696 | opp_overlap 2192018 2192019 GCGGGTGGCAATCAA CCGCGCGGCA GCGTA TGCAGCGCGG GTGCGCAGATTTGCC Rcas_1698 2192978 - 2192637 - | hypothetical protein TERM 1651 2192794 - 2192811 + g 73 -11.3 -3.64103 | GAGTTGCCTTGCTGA TTGCCGG GTAT CCGGCAA TTTGGCGTATGGGTG Rcas_1699 2193230 - 2194072 + | dTDP-4-dehydrorhamnose reductase Rcas_1700 2194244 - 2195182 + | glycosyl transferase family protein Rcas_1701 2195195 - 2196025 + | glycosyl transferase family protein Rcas_1702 2196038 - 2196592 + | hypothetical protein Rcas_1703 2196725 - 2197279 + | hypothetical protein TERM 1652 2197988 - 2197962 - T 73 -13.6 -2.71731 | TTTATCTCGCAACGA GGCGCCAGGCGT GAG ACGCGAGGCGCC CGACCACGGCGTAGC TERM 1653 2198051 - 2198025 - T 73 -13.6 -2.71731 | TTTATCTCGCAACGA GGCGCCAGGCGT GAG ACGCGAGGCGCC CGACCACGGCGTAGC Rcas_1704 2201285 - 2198625 - | hypothetical protein TERM 1654 2198719 - 2198756 + g 70 -12 -3.13728 | gap 1 TCGGGGCGTTCGAGC CG-GGCGTAGCGGGTGT ACTGG ACGCGCGCTGCGCCGCG TTGCATCTCACTGCT TERM 1655 2200460 - 2200411 - G 90 -17.8 -2.87132 | gap 1, overlap 2200390 CGCCGGTTTGAGACA TCCGGCGCAGCGCGCGCCAGCAG GAGCG CAGC-GGCGCACACTGCGCCGAG CCAGAGGGACCACAG TERM 1656 2201615 - 2201631 + G 78 -6.5 -4.55295 | ATCGGTCCCTGGATG CGGGAAC ATC GTTCGCG TTTCTTTCTGGCGAC Rcas_1705 2201423 - 2202280 + | aldo/keto reductase TERM 1657 2202399 - 2202359 - f 72 -13.4 -2.68823 | gap 1, opp_overlap 2202364 2202369, overlap 2202369 GCGTTGTTACATAAG GTTTACAAAACCGCCTGGG CAAG CCCTGGCGGTTTTGTTA-C TATCTCCTCAGCAAA TERM 1658 2202364 - 2202395 + F 95 -18.8 -3.3382 | opp_overlap 2202359 2202369, overlap 2202369 GTTACATAAGGTTTA CAAAACCGCCTGGG CAAG CCCTGGCGGTTTTG TTACTATCTCCTCAG TERM 1659 2202369 - 2202390 + F 100 -12.9 -4.77079 | opp_overlap 2202369 2202359, overlap 2202364 ATAAGGTTTACAAAA CCGCCTGGG CAAG CCCTGGCGG TTTTGTTACTATCTC TERM 1660 2202390 - 2202369 - f 100 -12.9 -4.40572 | opp_overlap 2202364 2202369, overlap 2202359 ATAAGGTTTACAAAA CCGCCTGGG CAAG CCCTGGCGG TTTTGTTACTATCTC TERM 1661 2202459 - 2202491 + F 75 -13.5 -2.87132 | opp_overlap 2202454, overlap 2202462 GACCGGAAATTGCGG CAGTCAGGCATGCGC CTG GCGCATGGTTGATTG TGTCTCAAAAACAGG TERM 1662 2202462 - 2202488 + F 77 -11.6 -3.58726 | opp_overlap 2202454, overlap 2202459 CGGAAATTGCGGCAG TCAGGCATGCGC CTG GCGCATGGTTGA TTGTGTCTCAAAAAC Rcas_1706 2202529 - 2202924 + | hypothetical protein Rcas_1707 2202946 - 2203395 + | peptidase A24A prepilin type IV TERM 1663 2203531 - 2203475 - f 73 -9.5 -3.92542 | opp_overlap 2203477, overlap 2203519 CTCATGCGCAAAGAA CCCCTCAGCTGTGGTCAGCT-GACGTT GCTGA AGCGACAAGCAAACCACAAC-GAGGGG TGAAGCGATGGGAGC Rcas_1708 2203539 - 2204360 + | transposase IS4 family protein TERM 1664 2205374 - 2205393 + GF 78 -10 -3.86524 | TGGCGCTTGGCAGTA TGTCGCCA CAGA TGGCGGCA TTTCTGCGCGCGTGT Rcas_1709 2204275 - 2206113 + | type II secretion system protein E TERM 1665 2206326 - 2206304 - g 81 -7.6 -4.46615 | overlap 2206316 2206317 CAGCATGAAGCAAAA CGATCCGCAG AAC CTGCGTCTCG CCGCAGCCAATCTCT Rcas_1710 2206110 - 2208206 + | von Willebrand factor type A TERM 1666 2208476 - 2208491 + G 71 -4.6 -4.46926 | overlap 2208474 2208470 AGGTGCTGAGCGATC CGCTGC GACG GCAGAG TTTTCTGGTGCGCTG Rcas_1711 2208319 - 2209275 + | type II secretion system protein TERM 1667 2210282 - 2210250 - Tf 72 -11.3 -3.34043 | opp_overlap 2210259 GGCACGAGGCGAGAA CAGCAGACACGTTGC ATC GCAACGTTTTTGCCG GGTGTTGCACTGCAA TERM 1668 2210259 - 2210273 + TF 89 -10 -4.59511 | opp_overlap 2210250 CGAGAACAGCAGACA CGTTGC ATC GCAACG TTTTTGCCGGGTGTT Rcas_1713 2212854 - 2211496 - | hypothetical protein Rcas_1712 2210469 - 2211554 + | hypothetical protein TERM 1669 2212403 - 2212393 - Gf 71 -8.2 -3.88291 | CAGGACGGTCAGAAA GGGC AAG GCCC AAACACGCTGGGCCC Rcas_1714 2213039 - 2213359 + | hypothetical protein Rcas_1715 2213514 - 2213840 + | hypothetical protein Rcas_1716 2213941 - 2214447 + | hypothetical protein Rcas_1717 2214461 - 2214718 + | hypothetical protein Rcas_1718 2214792 - 2215151 + | hypothetical protein Rcas_1719 2215273 - 2215650 + | hypothetical protein TERM 1670 2215852 - 2215840 - g 74 -6.2 -4.44667 | TTGGCGAATAATAAA GCCG ATGTG CGGC ATAAGAAAGAATTCC Rcas_1720 2215693 - 2216115 + | hypothetical protein Rcas_1721 2217243 - 2216131 - | MarR family transcriptional regulator Rcas_1722 2218182 - 2217301 - | ABC-3 protein TERM 1671 2217493 - 2217450 - G 71 -13 -3.01924 | overlap 2217492 CAGTGCTGCTCAACA GCGCTCCGGCAACACCGGCA GTGG CGCCGAAGATGCCGGAAAGC GCAACCATCACGCCA Rcas_1723 2219239 - 2218448 - | ABC transporter related Rcas_1724 2220238 - 2219309 - | periplasmic solute binding protein Rcas_1725 2221108 - 2221434 + | hypothetical protein Rcas_1726 2222324 - 2221449 - | hypothetical protein Rcas_1727 2222609 - 2223475 + | sortase family protein TERM 1672 2224524 - 2224484 - g 74 -13.1 -3.30159 | TCAACCCCGCCACAA CCACCGGCGCCTCCGCC TTCCGGC GGCGATGGCGGCGGAGG AGGCGGCACTCCCCC Rcas_1728 2223509 - 2225428 + | hypothetical protein TERM 1673 2226434 - 2226407 - g 100 -6.2 -5.75599 | overlap 2226409 2226421 GAAACCAGAAAAAAA GCGTGGGTCAGA GACC TCCGACCCATCC GCCGAAAGCGCAGAC Rcas_1729 2225823 - 2226467 + | aminoacyl-tRNA hydrolase Rcas_1730 2226994 - 2226464 - | small GTP-binding protein Rcas_1731 2227842 - 2227021 - | hypothetical protein TERM 1674 2227594 - 2227641 + g 86 -14.1 -3.84451 | gap 1 CAGGCTGACGCCGTT CTGACTCTGGTGC-GCCTGCGC CGCCT GCGCTGCCTGCACCGGTGTCAG TTTCCCTTTGCGGAC Rcas_1732 2228814 - 2227873 - | hypothetical protein Rcas_1733 2229411 - 2228968 - | hypothetical protein Rcas_1734 2229722 - 2229474 - | hypothetical protein Rcas_1735 2230890 - 2229739 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1675 2230890 - 2230880 - G 74 -4.6 -4.62336 | ACTTCACTGCAAAAA GCGG TAA CCAC GAAGGTCACAAAGGG TERM 1676 2231084 - 2231073 - R 89 -7.2 -5.1356 | opp_overlap 2231073 TTTGATCAACAAAAA GCGG TACA CCGC CGCTCGTTCCTTGTA Rcas_1736 2232071 - 2231121 - | mevalonate kinase Rcas_1737 2235513 - 2232439 - | hypothetical protein TERM 1677 2233386 - 2233417 + g 82 -2.8 -5.16071 | opp_overlap 2233388, overlap 2233360 2233388 2233392 AGGAACTGATGACAG TATCGGCGCCGGCG GCTT TGACGGCGGCAATG TTTTTCTTCATCGTT TERM 1678 2233529 - 2233511 - G 70 -10.3 -3.65425 | overlap 2233515 CCCAGATAGGTGAAA TCGACGC CTGCT GCGTCGA GCAGACGCACACTGG TERM 1679 2234262 - 2234284 + g 80 -5.5 -4.72986 | gap 1, opp_overlap 2234259, overlap 2234260 2234279 GCGCAAAATAGATGC CGGTG-GCGT AAGG GCGCCCGCCG TTTTTGATGGCGATA Rcas_1738 2236382 - 2235564 - | DNA binding domain-containing protein TERM 1680 2235620 - 2235640 + g 71 -9 -3.73402 | gap 1, overlap 2235629 GCAGCCGACTGATCA TCGTGGCGC GTTC GCGCC-CGA TTTCCTCGAAGGTGT TERM 1681 2236433 - 2236396 - R 81 -16.3 -2.88708 | overlap 2236391 ACACAGCATACCAGA CGCAGCGCGCCATTCAA GGAT TAGTATGACGCGCTGCG GTAGAGGAACGATAA Rcas_1739 2237994 - 2236456 - | bifunctional GMP synthase/glutamine amidotransferase protein Rcas_1740 2239997 - 2240476 + | phosphohistidine phosphatase, SixA Rcas_1741 2242587 - 2240701 - | hypothetical protein TERM 1682 2242917 - 2242972 + r 95 -14.8 -4.07568 | gap 1, opp_overlap 2242920, overlap 2242920 2242925 TATGGACTGGGAACG CAAGCGGAGTGCAGGCATTG-CCCGCA ATG TGCGGGACAACACCTGCACTTAACTTG TTTTCACGGAGAGGA TERM 1683 2242920 - 2242969 + r 84 -10.7 -4.17048 | gap 1, opp_overlap 2242920, overlap 2242917 2242925 GGACTGGGAACGCAA GCGGAGTGCAGGCATTG-CCCGCA ATG TGCGGGACAACACCTGCACTTAAC TTGTTTTCACGGAGA TERM 1684 2242969 - 2242920 - R 82 -15.1 -3.17723 | gap 1, opp_overlap 2242920 2242917 2242925 GGACTGGGAACGCAA GCGGAGTGCAGGCATTG-CCCGCA ATG TGCGGGACAACACCTGCACTTAAC TTGTTTTCACGGAGA TERM 1685 2242925 - 2242964 + r 89 -15.8 -3.37556 | gap 1, opp_overlap 2242920, overlap 2242920 2242917 GGGAACGCAAGCGGA GTGCAGGCATTG-CCCGCA ATG TGCGGGACAACACCTGCAC TTAACTTGTTTTCAC Rcas_1742 2245151 - 2244567 - | uncharacterized metal-binding protein-like protein Rcas_1743 2245777 - 2245385 - | glyoxalase/bleomycin resistance protein/dioxygenase Rcas_1744 2247172 - 2248611 + | putative transcriptional regulator Rcas_1745 2249225 - 2248596 - | peptidase S16 lon domain-containing protein TERM 1686 2249455 - 2249434 - g 72 -2.1 -4.74539 | gap 1, opp_overlap 2249436 2249443, overlap 2249435 AACAACTGAATAAAA GCGCGCCTCC ACC GGCGG-GTGC GGTGCTGTTCTATGG TERM 1687 2249695 - 2249727 + G 73 -12.7 -3.17797 | TGCGCGCCATGCTTG CCAGGATCGATGCCG CGC TGGGATCGATCCCGG TTGCATATATGTCGA Rcas_1746 2249283 - 2249999 + | GDSL family lipase Rcas_1747 2250211 - 2250939 + | hypothetical protein TERM 1688 2251449 - 2251502 + F 100 -23.1 -2.92192 | gap 1 CATCCGAACATGGGG GCGGGTCACCAGGGCGCAGGCGGGTC TCA GACCCGCTCGCGCCC-GGTGTCATGC TATACTTAACTGACC Rcas_1748 2251573 - 2252871 + | AAA ATPase Rcas_1749 2252887 - 2253480 + | leucyl/phenylalanyl-tRNA--protein transferase Rcas_1750 2254743 - 2253487 - | 2-alkenal reductase Rcas_1751 2255690 - 2254755 - | hypothetical protein Rcas_1752 2256907 - 2255894 - | squalene/phytoene synthase TERM 1689 2257090 - 2257119 + r 80 -14.3 -3.01791 | CACCGTACCACGACG CGCTGGCTGGTTG TCCA CAACCGGCTGGCG TGTTCAGAGCGACAT Rcas_1753 2258140 - 2257181 - | regulatory protein MerR Rcas_1754 2259227 - 2258340 - | hypothetical protein Rcas_1755 2260244 - 2259414 - | methyltransferase type 11 Rcas_1756 2260644 - 2260237 - | hypothetical protein Rcas_1757 2261048 - 2260644 - | rhodanese domain-containing protein TERM 1690 2261054 - 2261032 - G 100 -16.4 -4.20769 | opp_overlap 2261032 ACAGTGCAACACAAA GAGACGTTGC GCT GCAACGTCTC TTTTGCGCCTGCCGA TERM 1691 2261032 - 2261054 + g 100 -16.4 -4.11216 | opp_overlap 2261032 ACAGTGCAACACAAA GAGACGTTGC GCT GCAACGTCTC TTTTGCGCCTGCCGA Rcas_1758 2261541 - 2261089 - | iron-sulfur cluster assembly accessory protein Rcas_1759 2262757 - 2261687 - | molybdenum cofactor biosynthesis protein A TERM 1692 2262587 - 2262563 - G 79 -10.7 -3.85698 | overlap 2262564 CGGGCGCGGCATAAA TTGCATGCCGA TCT CCGGCATGCAG TAAACACACCGCATG TERM 1693 2262586 - 2262564 - G 77 -14.2 -2.91276 | overlap 2262563 GGGCGCGGCATAAAT TGCATGCCGA TCT CCGGCATGCA GTAAACACACCGCAT Rcas_1760 2263869 - 2262766 - | hypothetical protein Rcas_1761 2265212 - 2264244 - | ABC transporter related Rcas_1762 2266319 - 2265345 - | UspA domain-containing protein Rcas_1763 2267251 - 2266316 - | ABC transporter related Rcas_1764 2268018 - 2267248 - | alpha/beta hydrolase fold Rcas_1765 2269652 - 2268027 - | secretion protein HlyD family protein Rcas_1766 2270784 - 2269672 - | ABC-2 type transporter Rcas_1767 2271413 - 2270784 - | TetR family transcriptional regulator TERM 1694 2271844 - 2271878 + H 70 -12.8 -2.90511 | overlap 2271841 2271839 GAGTGTAAGGGATTG CGGGGGCCGGAGTG GGTAGAA CGCTTCGGACCCCG TGCTGTTTCTGAGTA TERM 1695 2272999 - 2273022 + G 70 -10.2 -3.65199 | overlap 2272996 2273004 TGATGCCGATCACGG CGGCAGCCGG CATG CTGGCTGCGG TTTCGATGGCCGGTT Rcas_1768 2271894 - 2274272 + | NADH dehydrogenase (quinone) Rcas_1769 2274284 - 2274700 + | putative monovalent cation/H+ antiporter subunit B Rcas_1770 2274705 - 2275052 + | putative monovalent cation/H+ antiporter subunit C TERM 1696 2276044 - 2276074 + G 87 -6.1 -5.1101 | gap 1 ATCATGGGGTTGGGG CTGTTCACGTC-GC TGGC GCTGGCGGGAGCAG TTTTTTACATCATGC Rcas_1771 2275090 - 2276592 + | NADH dehydrogenase (quinone) Rcas_1772 2276602 - 2277072 + | putative monovalent cation/H+ antiporter subunit E Rcas_1773 2277072 - 2277335 + | multiple resistance and pH regulation protein F TERM 1697 2277412 - 2277431 + G 73 -6.4 -4.3014 | overlap 2277402 GCTGGCGGGCATTGG TATCGTGC GCAT GCCCGATA TTTTCCTGCGTATGT Rcas_1774 2277332 - 2277763 + | monovalent cation/proton antiporter, MnhG/PhaG subunit Rcas_1775 2279829 - 2278252 - | AMP-dependent synthetase and ligase TERM 1698 2278676 - 2278705 + g 82 -5.7 -4.95155 | gap 1, opp_overlap 2278668 GTGAAGAGCCATCCA TCCCGAA-TGGCAG CGG CAGTCGCTTCGGGA TTTTTGTAGTATCCC TERM 1699 2279844 - 2279882 + r 79 -15.3 -2.88544 | opp_overlap 2279850 TAGTTCCTTATCCGA ACTGAACCTGCGGGAAG ACGTG CTCCCCGCAGGTTCGGC TGTCTACAACTCGCG TERM 1700 2279876 - 2279850 - R 85 -15.9 -3.18274 | opp_overlap 2279844 CTTATCCGAACTGAA CCTGCGGGAAG ACGTG CTCCCCGCAGG TTCGGCTGTCTACAA Rcas_1776 2280407 - 2279886 - | acetone carboxylase gamma subunit Rcas_1777 2282604 - 2280391 - | hydantoinase B/oxoprolinase TERM 1701 2281764 - 2281742 - G 81 -7.6 -4.45083 | overlap 2281744 GTCACATCCATAAAA CTCGGCACAC TGT ACGTGCCGGG GATGGTCAACTCCCT TERM 1702 2281983 - 2282001 + g 74 -5.2 -4.62069 | overlap 2281976 2281984 CATAGTCGCGGTGCA ATCGGTTC TTC GAGCCGAC TTTTTGCGCTGAAAG Rcas_1778 2284795 - 2282648 - | 5-oxoprolinase (ATP-hydrolyzing) Rcas_1779 2284958 - 2285893 + | AraC family transcriptional regulator TERM 1703 2286056 - 2286072 + T 73 -9.5 -3.85698 | opp_overlap 2286054, overlap 2286036 GATCTTCCAGAGATG GAGTATC GAC GATACTC TTTGTCGAGACGGGA Rcas_1780 2287703 - 2286342 - | H(+)-transporting two-sector ATPase TERM 1704 2286896 - 2286873 - G 84 -13.9 -3.70076 | opp_overlap 2286890 CGAAATTGACTGAAA GAGCGCCAG CGCAAT CTGGCGCTC CAGCGACTCGTTTGC TERM 1705 2286958 - 2286947 - G 74 -2.2 -4.82901 | gap 1, overlap 2286948 GTTCGGTCAGAAAAA GC-CC GCC GGCGC CAATCGAGACCAGCG Rcas_1781 2288368 - 2287700 - | TrkA domain-containing protein TERM 1706 2287790 - 2287779 - G 71 -5.8 -4.35524 | TGCGCAAAGGTAAAA TCCG GCGC CGGA AAGACCGTCAGATGC Rcas_1782 2288685 - 2288455 - | AsnC family transcriptional regulator Rcas_1783 2289090 - 2289260 + | hypothetical protein TERM 1707 2289310 - 2289284 - f 72 -13.7 -2.57013 | overlap 2289280 CTCGAAGGGAACGCA GCTGCCAGGTG CGAGT CGCCTGGCAGC GCAGCAGAGGAAGGT TERM 1708 2291149 - 2291134 - g 71 -4.6 -4.4836 | opp_overlap 2291142, overlap 2291128 2291135 GAAGAAAAGGCAAAA CTCGCG GGCG CGCCAG CGATGGAAACCGCAG Rcas_1784 2289415 - 2291187 + | AMP-dependent synthetase and ligase TERM 1709 2291474 - 2291512 + G 81 -13.8 -3.63922 | overlap 2291472 2291478 CAGGCGGATGCGGGC GGCCCGCTGCTCGTCC ACGATCC GGACGGGCGGCGTGTC TATTTTGCAGCGCCT TERM 1710 2291478 - 2291508 + G 77 -14 -3.26779 | overlap 2291474 2291472 CGGATGCGGGCGGCC CGCTGCTCGTCC ACGATCC GGACGGGCGGCG TGTCTATTTTGCAGC Rcas_1785 2291294 - 2292505 + | hypothetical protein Rcas_1786 2292507 - 2293673 + | iron-containing alcohol dehydrogenase TERM 1711 2293822 - 2293839 + G 77 -4.1 -4.93877 | CATTCATCGTACCTG CGATACT CCAT AGTAGCG TTTTCTTTCATGCGG Rcas_1787 2293779 - 2295347 + | integral membrane sensor signal transduction histidine kinase Rcas_1788 2296165 - 2295554 - | cation efflux protein Rcas_1789 2296416 - 2296162 - | hypothetical protein Rcas_1790 2296940 - 2296728 - | hypothetical protein Rcas_1791 2297528 - 2297037 - | YbaK/prolyl-tRNA synthetase associated region Rcas_1792 2298941 - 2300215 + | tyrosyl-tRNA synthetase Rcas_1793 2303753 - 2300238 - | cyclic nucleotide-binding protein TERM 1712 2300558 - 2300533 - G 88 -4.5 -5.37865 | opp_overlap 2300536 2300538 2300544 CGAATAATGAAAAAA GTGCCGCTGGG TCTG CCCTGGCGCAC AATGACCGTGCGCGC TERM 1713 2301827 - 2301812 - G 73 -3.2 -4.73613 | overlap 2301814 CTATCATCAACAAAA TGGCTG TTCC CAGCAA CTCGTGCAACGGTGT TERM 1714 2302700 - 2302687 - G 72 -3.8 -4.54449 | opp_overlap 2302687 ACACTCGATACAAAA CTGG TGAACG CCAG TTTGTAAGCAATTGC TERM 1715 2304633 - 2304655 + G 71 -12.6 -3.01712 | ATTGCGTTGACGTTC GCCGGCGCCG GTG CGGCGGTGGC TGTTGCCGGGCGCAA Rcas_1794 2304555 - 2305316 + | short-chain dehydrogenase/reductase SDR Rcas_1795 2305322 - 2308267 + | phosphoribosylformylglycinamidine synthase II Rcas_1796 2308290 - 2309108 + | hypothetical protein Rcas_1797 2309108 - 2309830 + | hypothetical protein Rcas_1798 2310554 - 2309901 - | O-methyltransferase family protein Rcas_1799 2310805 - 2311524 + | putative esterase Rcas_1800 2311554 - 2312513 + | hypothetical protein TERM 1716 2313426 - 2313444 + G 70 -10.2 -3.53811 | overlap 2313411 GGCGTACCGCGATGG GCGCCTGG TTG CCACGCGC TTTGAGGCAACTGAG TERM 1717 2313895 - 2313860 - g 74 -11.8 -3.53444 | TTATCGGCTGGGAAA CATCGCCAGACGCATG GGAT CGCGCGCTTGGCGATG CGCTGCGCACGCCGT TERM 1718 2314077 - 2314104 + G 81 -11.9 -3.96148 | GCTGTTGAATGTCAC GGCCGGCGGCG GATCGA CGACGCCGGTC TTTCTGGTGGGGAGA Rcas_1801 2312737 - 2314134 + | hypothetical protein Rcas_1802 2314131 - 2315270 + | carboxylate-amine ligase Rcas_1803 2316361 - 2315369 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 1719 2316420 - 2316385 - R 100 -9.1 -5.5208 | gap 1, overlap 2316418 2316419 CGATAATACAAAAAA GGGTTACTGACCCGCC GGCAT GGCTG-TCAATAACCC CGCACGACGCGCACG Rcas_1804 2316640 - 2316443 - | ribosomal protein L32 Rcas_1805 2317208 - 2316660 - | hypothetical protein Rcas_1806 2317651 - 2317274 - | hypothetical protein Rcas_1807 2318197 - 2317715 - | pantetheine-phosphate adenylyltransferase TERM 1720 2317794 - 2317777 - G 71 -9.1 -3.7791 | opp_overlap 2317777 2317776, overlap 2317793 GAACCAGCCAGGAAA CGTCGCC GCCA AGCGACG CGATTTCACGCACCG TERM 1721 2318027 - 2318050 + g 70 -12.4 -3.19463 | CGGGAGGTGGCGAGT CGACTCGCGC AGCA GCGCGACTCG TTCGTCGGTGCTGAA Rcas_1808 2318869 - 2318294 - | putative methyltransferase TERM 1722 2319200 - 2319218 + r 85 -3.9 -5.37171 | AAATAGTGCTTGCTA GAGTATT CACAA GATACTC TTTTTGTTTCCTATT TERM 1723 2319276 - 2319248 - R 70 -10.3 -3.53012 | opp_overlap 2319245 TTCCTGCGGGTGAAA GCCTCTTTGAAGG CAT CGTTCAAGGAGGC AGGATTATAGAGCAT Rcas_1810 2320443 - 2319454 - | DNA methylase N-4/N-6 domain-containing protein Rcas_1811 2321804 - 2320440 - | aminotransferase class-III Rcas_1812 2322538 - 2321804 - | metallophosphoesterase TERM 1724 2323593 - 2323548 - g 80 -14.8 -3.14132 | gap 2, opp_overlap 2323545 2323544 2323588 CCGTGCCGCCAGCAA TGCCGC-GAA-CGCCTGCGCCG CCGG CGGCGCCGACGGTTCAGCAGCA ACGATTGTGGCTCTA Rcas_1813 2322755 - 2324392 + | hypothetical protein Rcas_1814 2324729 - 2324394 - | hypothetical protein Rcas_1815 2324959 - 2324726 - | hypothetical protein Rcas_1816 2325489 - 2324977 - | hypothetical protein Rcas_1817 2325741 - 2325493 - | hypothetical protein Rcas_1818 2326875 - 2325760 - | peptidase M50 TERM 1725 2327864 - 2327876 + H 73 -10.5 -3.57918 | opp_overlap 2327857 GCTTAAGACCTGGAA GCCCC GGA GGGGC TTGTGTGATCTCAGT TERM 1726 2328011 - 2328043 + H 95 -12 -4.59109 | gap 1 CGCGCCAGCAGCTGC GCGCGAAGATGG-CG CACT CGTCCGTCATCGCGC TTTTTCCCGGATGTC TERM 1727 2328815 - 2328838 + G 77 -4.4 -4.84359 | CGCCGCTATCGAGCG CTTCCTGGCG CATG CGCCCGAAGG TTTTTGTGGCGATGC Rcas_1819 2328255 - 2328869 + | beta-lactamase domain-containing protein TERM 1728 2328934 - 2328949 + G 73 -3.2 -4.67607 | overlap 2328918 2328936 GGTCTCCTATCGCGC GACCCT TTGG AGGGTG TTTGTTTGTTGCGGG Rcas_1820 2328879 - 2330114 + | membrane protein-like protein Rcas_1821 2330111 - 2330509 + | hypothetical protein TERM 1729 2330900 - 2330921 + F 72 -13.7 -2.53995 | opp_overlap 2330900 TCGACGACGTAGAGA TCGCGCGCC TCCC GGCGCGTGA TCGGTTGCCCTGAAT TERM 1730 2331358 - 2331374 + G 71 -9.3 -3.695 | overlap 2331366 AGAAGTTCTATTTCA CCCCCGG CGA CCTGGGG TTTAAGGTCTTTGCA TERM 1731 2331651 - 2331664 + G 75 -3.1 -4.88918 | overlap 2331652 GACGGTGGCATCGAG TTCTG GGGT CAGAG TTTTGTTTCCGATCC Rcas_1822 2330961 - 2331845 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Rcas_1823 2331856 - 2332902 + | agmatine deiminase Rcas_1824 2333839 - 2332919 - | hypothetical protein Rcas_1825 2334704 - 2334192 - | cyclase/dehydrase TERM 1732 2335192 - 2335182 - g 73 -3.2 -4.77775 | ATGGCAGAAAAGAAA TCGA AAA CCGA CGTTACCGCGCGTGA Rcas_1826 2335167 - 2335352 + | hypothetical protein TERM 1733 2335380 - 2335414 + F 76 -12.9 -3.31905 | overlap 2335378 2335382 TTTTTCAGCGAGCTT TATCGGCTCATCCGT TGTGT GCGGGTGAGCCGATC TGTTCTCTGAGGCAT TERM 1734 2335382 - 2335412 + F 85 -15.5 -3.22618 | overlap 2335380 2335378 TTTCAGCGAGCTTTA TCGGCTCATCCGT TGTGT GCGGGTGAGCCGA TCTGTTCTCTGAGGC Rcas_1827 2335433 - 2336305 + | hypothetical protein TERM 1735 2336334 - 2336360 + T 74 -13 -3.15579 | AGTGATGGACGGCAA CGCCTGCCTG TGAGGTT CGGGCAGGCG TTGGTAGCGGGTTCG Rcas_1828 2338195 - 2336606 - | polysaccharide biosynthesis protein TERM 1736 2337944 - 2337934 - G 73 -3.2 -4.77173 | TTGTGAGAAAATAAA GACC GGC GATC AGGGCAACGAACGCA Rcas_1829 2338247 - 2339041 + | hypothetical protein TERM 1737 2339708 - 2339736 + G 74 -14.6 -2.55544 | gap 1, overlap 2339703 CATTGGTAATTCTTG GGCGGAGCGACCC GCAT GGGTTGC-CCGCC TGGATTGCATGGTGC Rcas_1830 2339041 - 2339838 + | hypothetical protein Rcas_1831 2340258 - 2339845 - | hypothetical protein Rcas_1832 2340343 - 2341350 + | ABC transporter related TERM 1738 2341398 - 2341383 - T 76 -5.4 -4.58663 | gap 1 AGTATGGCGCAAAAA TGTCCGC TAC GCGG-CA ACTAAACGCGGGAAG Rcas_1833 2341923 - 2341366 - | hypothetical protein TERM 1739 2341483 - 2341449 - G 74 -9.2 -3.88291 | opp_overlap 2341468 2341468 GATCATCGCCAGAAA GCGCCTGAATCGAACC TTC GGCTCGATGCACGAGC ACTTCGTGGGTGCGT TERM 1740 2341562 - 2341541 - G 71 -5 -4.52589 | overlap 2341542 CCGGCGGAGAGAAAA TCGCGCAC CTTTTC GCGCGCGT CCCCGGCGGTCTCGG TERM 1741 2342646 - 2342664 + G 81 -10.2 -4.15044 | CACTGCGTCCCGGCG CAGCTGCG AAG CGCAGCGG TTTGTTGCGACGACC Rcas_1834 2342051 - 2343832 + | TPR repeat-containing protein Rcas_1835 2343853 - 2344998 + | amidohydrolase 2 Rcas_1836 2344995 - 2346233 + | major facilitator transporter Rcas_1837 2346377 - 2347156 + | phosphoglycolate phosphatase Rcas_1838 2347417 - 2348541 + | hypothetical protein Rcas_1839 2349680 - 2348592 - | glycosyl transferase group 1 Rcas_1840 2351029 - 2349683 - | peptidase M20 TERM 1742 2349936 - 2349955 + g 86 -7.8 -4.72986 | gap 1, overlap 2349937 TGGACGACGTGCGAG TCGGGGTCG GAG CG-CCCCGG TTTTTCGTGCCCGTA TERM 1743 2350031 - 2350009 - G 76 -13.4 -3.14211 | AGCCGTGCGCATCAA GATGACGGCG CAA CGCCGCCACC ACGTCCGCCGGGTCC TERM 1744 2350321 - 2350339 + g 75 -11.7 -3.57144 | opp_overlap 2350312 AGAAACCGGGGATCA GCACCCG CTCAT CGGGTGC TTTGAGCGTCGCCAG Rcas_1841 2351159 - 2352307 + | phosphotransferase domain-containing protein Rcas_1842 2354359 - 2353328 - | hypothetical protein TERM 1745 2354326 - 2354312 - G 91 -2.8 -5.41143 | overlap 2354322 CAGTTCGCAAAAAAA GCTC AGAGCAG GAGC GTGTATGCTCCCCTC Rcas_1843 2355089 - 2354340 - | phosphoribosylaminoimidazolesuccinocarboxamide synthase TERM 1746 2355200 - 2355220 + r 90 -18.3 -3.21099 | opp_overlap 2355214 AGACCTGTCCGGTTG GGGCGGGTC AGA GACCCGCCC TTACTACTGCGACCG TERM 1747 2355240 - 2355286 + r 100 -25.9 -3.21099 | opp_overlap 2355214 2355280 TACTGCGACCGGTTG GGGCGGGTCTGCGACCTGCCC GGTTG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1748 2355306 - 2355352 + r 100 -25.9 -3.21099 | opp_overlap 2355280 2355346 TACTGCGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1749 2355398 - 2355444 + r 95 -20.1 -3.21099 | opp_overlap 2355438 AGCGCTGCCCAGTCG GGGCAGGTCTGCGACCTGCCC GGTTG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1750 2355464 - 2355511 + r 100 -24.9 -3.21099 | opp_overlap 2355438 2355505 TACTGCGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTGG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1751 2355531 - 2355577 + r 100 -25.9 -3.21099 | opp_overlap 2355505 2355571 TACTGCGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1752 2355597 - 2355644 + r 100 -24.9 -3.21099 | opp_overlap 2355571 2355638 TACTGCGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTGG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1753 2355690 - 2355737 + r 100 -24.9 -3.21099 | opp_overlap 2355731 AGCGCTGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTGG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1754 2355783 - 2355830 + r 100 -24.9 -3.21099 | opp_overlap 2355824 AGCGCTGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTGG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1755 2355850 - 2355896 + r 100 -25.9 -3.21099 | opp_overlap 2355824 2355890, overlap 2355877 TACTGCGCCCAGTCG GGGCGGGTCTGCGACCTGCCC GGTTG GGGCGGGTCAGAGACCCGCCC TTACTACTGCGCCCA TERM 1756 2355877 - 2355935 + r 88 -18.9 -2.5844 | opp_overlap 2355890, overlap 2355850 2355907 2355916 GACCTGCCCGGTTGG GGCGGGTCAGAGACCCGCCCTTACT ACTGCGCCC AGTCGGGGCGGGTCTGCGACCTGCC CTTACTGTGCTATGC TERM 1757 2355907 - 2355945 + r 85 -17.4 -2.85999 | opp_overlap 2355890, overlap 2355877 2355916 CGCCCTTACTACTGC GCCCAGTCGGGGCGGGTC TGC GACCTGCCCTTACTGTGC TATGCTATCAGATGC TERM 1758 2355916 - 2355936 + r 86 -14.7 -3.31537 | opp_overlap 2355890, overlap 2355877 2355907 TACTGCGCCCAGTCG GGGCGGGTC TGC GACCTGCCC TTACTGTGCTATGCT Rcas_1844 2356970 - 2355945 - | phosphoribosylaminoimidazole synthetase Rcas_1845 2357080 - 2357724 + | hypothetical protein Rcas_1846 2357721 - 2358131 + | hypothetical protein TERM 1759 2359344 - 2359326 - g 72 -7.3 -4.23999 | opp_overlap 2359324 2359326 2359327, overlap 2359327 GCATATGCAAAAGAA GCGCCGG GTAGA CCGGCGG TATTGGTGATGACGA TERM 1760 2360524 - 2360510 - g 70 -7.8 -4.07568 | CGGCGTCTTCCAAAA TCGGCG TCT CACCGA ACTACTGGTCGCTCG Rcas_1847 2358309 - 2360648 + | (NiFe) hydrogenase maturation protein HypF Rcas_1848 2360928 - 2362031 + | dihydroorotase Rcas_1849 2362197 - 2363273 + | LacI family transcription regulator Rcas_1850 2363285 - 2363536 + | hypothetical protein Rcas_1851 2364638 - 2363517 - | glucose-6-P dehydrogenase subunit-like protein Rcas_1852 2366191 - 2364635 - | glucose-6-phosphate 1-dehydrogenase TERM 1761 2364741 - 2364724 - G 76 -9.1 -4.09243 | gap 1, overlap 2364725 CATAGTTGGGGAAAA CCGGCGGC GGC GCCGC-GG CCCACCCCTCGATGA Rcas_1853 2368813 - 2366219 - | hypothetical protein TERM 1762 2366534 - 2366507 - G 84 -2.6 -5.24531 | gap 1, overlap 2366508 ACCGGTCACAAAAAA GCGTGTCGCCGTC ACC AACGGCGG-ACGG ATCTGCGGGACGGGG TERM 1763 2368009 - 2368057 + g 88 -16.6 -3.33696 | gap 1, opp_overlap 2368000 2367997 2367995, overlap 2368013 ACACGAGGTCGGCGC CGGCGCGGGCAAGGCGCTCGGCG ACGC CGCTGAGCGCCAGGCGCGC-TCG TTCATTGACCCCGGC TERM 1764 2368013 - 2368054 + g 91 -19.3 -2.84098 | opp_overlap 2368000 2367997 2367995, overlap 2368009 GAGGTCGGCGCCGGC GCGGGCAAGGCGCTCGGCG ACGC CGCTGAGCGCCAGGCGCGC TCGTTCATTGACCCC TERM 1765 2368625 - 2368604 - G 70 -7.3 -4.07568 | CGGGTCCTCGTAAAA GATGCGC CGGATTGT GCGCATC ACGAGCACACAGGCG Rcas_1854 2368904 - 2369188 + | hypothetical protein Rcas_1855 2369943 - 2369239 - | hypothetical protein TERM 1766 2370488 - 2370504 + G 75 -4.3 -4.70169 | CCTGGTCTCCCTGTC GCTCGGT GTT ATCGCGC TTTTGTTGAGTGTCG TERM 1767 2371084 - 2371068 - g 71 -9.4 -3.73647 | overlap 2371065 CTTACCGACGAACAA CGCGCA GTCGT TGCGCG GTTAGAGGAAAGCCT Rcas_1856 2370402 - 2371499 + | anti-sigma-factor antagonist TERM 1768 2371705 - 2371736 + G 83 -6.4 -4.83169 | gap 1, opp_overlap 2371705 GATTGACGATCTAAA CCTCGG-CGTCACCC TGT GGGCGCCGATCGGGG TTTTTATGCCCGGCT Rcas_1857 2371496 - 2372104 + | hypothetical protein TERM 1769 2372203 - 2372188 - T 72 -11.8 -3.29324 | overlap 2372183 GCTACGGAAAGCGAA GCCCGC CTGC GCGGGC TAGACGGCATCGCCG TERM 1770 2372203 - 2372223 + T 74 -11.1 -3.52093 | opp_overlap 2372183 GCCCGCCTGCGCGGG CTAGACGGC ATC GCCGCCTAG TTGTGCTTGGGGTGT Rcas_1858 2374970 - 2372358 - | hypothetical protein Rcas_1859 2376616 - 2374967 - | amidohydrolase 3 TERM 1771 2375575 - 2375605 + g 83 -12.5 -3.84406 | opp_overlap 2375593 CAACCTGGAATCCGG CGCGATGCGCGCG CAACA CCCGCGCATCGAG TTCTTCTGCTGGCAC Rcas_1860 2376868 - 2378097 + | molybdenum cofactor synthesis domain-containing protein Rcas_1861 2378160 - 2380103 + | molybdenum cofactor synthesis domain-containing protein Rcas_1862 2380463 - 2380185 - | MoaD family protein Rcas_1863 2382358 - 2380529 - | aldehyde ferredoxin oxidoreductase TERM 1772 2381585 - 2381609 + g 79 -11.5 -3.91144 | overlap 2381586 CGGCAGAGCGCCCAT TGTGCTGGTGA TGT TCATCAGCACG TTTGTGCCATATACC TERM 1773 2381586 - 2381608 + g 70 -12.8 -2.94365 | overlap 2381585 GGCAGAGCGCCCATT GTGCTGGTGA TGT TCATCAGCAC GTTTGTGCCATATAC Rcas_1864 2382778 - 2384214 + | amine oxidase TERM 1774 2384291 - 2384273 - g 79 -11 -3.85698 | opp_overlap 2384252, overlap 2384274 TGCTGGTGCGAGAAA CCGATGGC GTC GCCATCGA TCTCGCACCGTTGCA Rcas_1865 2384227 - 2384844 + | hypothetical protein TERM 1775 2385092 - 2385034 - g 71 -13.9 -2.63631 | gap 3 GCAATCGGCATAGCA GCGCGCCGC-CTGACCGCCGCAAC-CGG CGTCAC CCGTGTCGCTGCGGTCGGCGCGACG-GC GCAGTGGTCGGGCAC Rcas_1866 2384854 - 2386416 + | carbohydrate kinase FGGY Rcas_1867 2386418 - 2387914 + | pyridoxal-dependent decarboxylase TERM 1776 2388256 - 2388286 + T 83 -15.4 -3.12351 | opp_overlap 2388257 2388260, overlap 2388260 ACGCCTGAGGCAAAG AGAAGGCCCCGTCG TTT CGACGAGGCCTTCA TTCGCTGTGAAGACC TERM 1777 2388285 - 2388257 - T 100 -21.1 -3.40597 | opp_overlap 2388256 2388260, overlap 2388260 CGCCTGAGGCAAAGA GAAGGCCCCGTCG TTT CGACGAGGCCTTC ATTCGCTGTGAAGAC TERM 1778 2388282 - 2388260 - T 100 -17 -3.84185 | opp_overlap 2388256 2388260, overlap 2388257 CTGAGGCAAAGAGAA GGCCCCGTCG TTT CGACGAGGCC TTCATTCGCTGTGAA TERM 1779 2388260 - 2388282 + T 86 -14.8 -3.39142 | opp_overlap 2388260 2388257, overlap 2388256 CTGAGGCAAAGAGAA GGCCCCGTCG TTT CGACGAGGCC TTCATTCGCTGTGAA Rcas_1868 2388553 - 2388335 - | hypothetical protein TERM 1780 2388435 - 2388409 - G 72 -7.3 -4.13014 | GGCAGACGCCGAAAA TGGCAGTGATC AGGAG GATGACCGCCA CCAAACCGATGAGCG TERM 1781 2388776 - 2388805 + r 89 -9.9 -4.55849 | gap 1, overlap 2388780 GCATGGGGGCGCTGG GCGTGGGGGGCGCT GGC GGCGCGCCCC-TGC TTTCTTTCCATTTTC TERM 1782 2388780 - 2388802 + r 74 -12.6 -3.20126 | overlap 2388776 GGGGGCGCTGGGCGT GGGGGGCGCT GGC GGCGCGCCCC TGCTTTCTTTCCATT Rcas_1869 2390783 - 2388858 - | serine/threonine protein kinase Rcas_1870 2399678 - 2391084 - | glycosyltransferase 36 TERM 1783 2393565 - 2393607 + g 74 -13.3 -3.28712 | gap 1, overlap 2393566 TTCTGCCGGCAGCGG CTCGCCGCCGACCGGCAGCG CAAC CGTTGGCGG-CGGCGGCGCC TTGTCGGGCAGGCGG TERM 1784 2393566 - 2393606 + g 80 -16.8 -2.57132 | gap 1, overlap 2393565 TCTGCCGGCAGCGGC TCGCCGCCGACCGGCAGCG CAAC CGTTGGCGG-CGGCGGCGC CTTGTCGGGCAGGCG TERM 1785 2394211 - 2394158 - G 88 -16 -3.25942 | gap 1, overlap 2394144 2394159 AGGCGCGCATAGCAA TGGCGGCATCGCGATAGTGCGCCGC CAGGC GCAGCGCATCATCGCG-TGTCGCCG CGACCGCCATGGTCA TERM 1786 2394210 - 2394159 - G 90 -19.5 -2.55351 | gap 1, overlap 2394144 2394158 GGCGCGCATAGCAAT GGCGGCATCGCGATAGTGCGCCGC CAGGC GCAGCGCATCATCGCG-TGTCGCC GCGACCGCCATGGTC TERM 1787 2394880 - 2394826 - G 78 -6.4 -4.64844 | gap 4, opp_overlap 2394872, overlap 2394827 2394828 CGCACATACACAAAA CTGCCGGACG-CATCGCGCGTCGGGTCG GGA CG-CCAG-CGCGTGATGGCGACCGAC-G TCGTGCGTTCGGGCA TERM 1788 2396676 - 2396664 - G 76 -10.5 -3.91716 | CCAGCGGGCAAAGAA GGGCG CTG CGCCC CATGCGAGCGTCACC Rcas_1871 2400329 - 2399925 - | hypothetical protein Rcas_1872 2401986 - 2400601 - | hypothetical protein Rcas_1873 2402268 - 2402678 + | hypothetical protein Rcas_1874 2405490 - 2402803 - | alpha-L-rhamnosidase Rcas_1875 2407721 - 2405487 - | 6-phosphofructokinase TERM 1789 2408111 - 2408074 - H 95 -20.5 -3.14564 | opp_overlap 2408072 2408092 CTACCGGGGGACGAA CCCGCGCGCGGCGCAAG CCCC CCTGCTCCCCGCGCGGG GGGTTCTGGGCGGGT TERM 1790 2408092 - 2408114 + H 76 -12.6 -3.29511 | opp_overlap 2408074, overlap 2408072 GCGCGCGGCGCAAGC CCCCCTGCTC CCC GCGCGGGGGG TTCTGGGCGGGTACA TERM 1791 2408536 - 2408577 + H 72 -13.5 -2.57564 | opp_overlap 2408530 2408529, overlap 2408535 GCCTACAATGGGACG GACCCGCGCGCGGCGCAAG CTCC CCTGCTCCGTGCGCGGGGG GTTCTGGGCGGGTAC TERM 1792 2408983 - 2408942 - H 91 -19.3 -3.14564 | CTACCGGGGGACGAA CCCGCGCGCGCGGCGCAAG CCCC CCTGCTCCCCGCGCGTGGG GGGGTCTGGGCGGGT TERM 1793 2409146 - 2409190 + H 72 -13.4 -2.57564 | gap 1, opp_overlap 2409147, overlap 2409145 CCTACCGGGGGACGA AC-CCGCGCGCGCGGCGCAAG CCCC CCTGCTCCCCGCGCGCGGAGG GTTCTGGGCGGGTAC TERM 1794 2409188 - 2409147 - H 100 -21.5 -3.14564 | opp_overlap 2409146 2409145 CTACCGGGGGACGAA CCCGCGCGCGCGGCGCAAG CCCC CCTGCTCCCCGCGCGCGGA GGGTTCTGGGCGGGT TERM 1795 2409315 - 2409358 + H 89 -15.8 -3.29511 | opp_overlap 2409316, overlap 2409316 AAGGGCGGACCGAAC ACCCGCGCGCGCGGCGCAAG CTCC CCTGCTCCGTGCGCGGGGGG TTCTGGGCGGGTACA TERM 1796 2409357 - 2409316 - H 90 -19.3 -3.08798 | opp_overlap 2409315 2409316 AGGGCGGACCGAACA CCCGCGCGCGCGGCGCAAG CTCC CCTGCTCCGTGCGCGGGGG GTTCTGGGCGGGTAC TERM 1797 2409316 - 2409357 + H 88 -19.3 -2.57564 | opp_overlap 2409316, overlap 2409315 AGGGCGGACCGAACA CCCGCGCGCGCGGCGCAAG CTCC CCTGCTCCGTGCGCGGGGG GTTCTGGGCGGGTAC TERM 1798 2409519 - 2409561 + H 72 -13.3 -2.57564 | gap 1, opp_overlap 2409519, overlap 2409518 2409559 CTACCGGGGGACGAA CCCGCGCGCGCGG-CGCAAG CCCC CCTGCTCCCGCGCGTGGGGG GTTCTGGGCGGGTAC TERM 1799 2409559 - 2409519 - H 89 -16.8 -3.14564 | gap 1, opp_overlap 2409519 2409518 CTACCGGGGGACGAA CCCGCGCGCGCGGCGCAAG CCCC CCTGCTCC-CGCGCGTGGG GGGTTCTGGGCGGGT Rcas_1876 2409812 - 2410309 + | hydrogenase maturation protease TERM 1800 2410325 - 2410315 - T 75 -8.2 -4.2558 | opp_overlap 2410315 2410314 GACCGGTTAGGAAAA CGGC GCC GCCG GTTTCATCCAGTCTG Rcas_1877 2411187 - 2410306 - | metallophosphoesterase TERM 1801 2411371 - 2411329 - H 88 -13.5 -3.59979 | overlap 2411330 2411333 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 1802 2411370 - 2411330 - H 84 -17 -2.75844 | overlap 2411329 2411333 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 1803 2411368 - 2411333 - H 85 -18.4 -2.65354 | gap 1, overlap 2411330 2411329 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC TERM 1804 2413739 - 2413729 - g 72 -2.4 -4.67982 | GCTGATCGAAGAAAA GGCG ACC CGTC CATTCCAGCTGGCTG Rcas_1879 2412968 - 2414326 + | extracellular solute-binding protein Rcas_1880 2414409 - 2415359 + | binding-protein-dependent transport systems inner membrane component TERM 1805 2416014 - 2416028 + G 72 -7.8 -4.20696 | TCATTGTGCCTGCGC TGGCGG CCC TCGCCA TTTTGACCTTCCTCG Rcas_1881 2415371 - 2416264 + | monosaccharide-transporting ATPase TERM 1806 2416422 - 2416474 + G 72 -7.6 -4.24342 | gap 1, overlap 2416423 2416427 2416463 CCTGCGCCGCGCGTC GCGCCTGTGCGAGTCGAAGTCGTGC CGTT GCGCGACTCCGATGCGC-CATGTGG TTTGTTCATCGCGCA Rcas_1882 2416272 - 2417993 + | ASPIC/UnbV domain-containing protein TERM 1807 2418573 - 2418588 + G 85 -6 -5.00616 | CACCGACCTGCAACC GCAGGG GCTA CCCGGC TTTTTTGGGCGCGAC Rcas_1883 2418016 - 2418780 + | hypothetical protein TERM 1808 2420015 - 2420003 - g 82 -6.2 -4.82901 | TCTGGTGGACAAAAA CGGC GTTCA GCCG ACAAAGATCGGCGCA Rcas_1884 2418834 - 2420240 + | glycoside hydrolase family protein TERM 1809 2420377 - 2420346 - T 76 -9.4 -4.12198 | gap 1, opp_overlap 2420375, overlap 2420337 2420336 2420356 TACAAGGGCGCAAAA GCGCAAGGAAGC-CG TTG CGCACTCCCGTGCGC CCCGTCGGAGGCTTC TERM 1810 2420375 - 2420407 + T 79 -14.7 -2.90075 | opp_overlap 2420346 2420356 TTGCGCACTCCCGTG CGCCCCGTCGGAGGC TTC GCCGGCGACAGGGCG TGTCCTTCCGGGCGC TERM 1811 2420976 - 2420986 + T 100 -8.2 -5.26918 | overlap 2420975 TCGTCCGTCCATGCC CCGC TGC GCGG TTTTTTCTCCGGTGT TERM 1812 2421294 - 2421270 - T 76 -5.5 -4.62069 | overlap 2421272 CCGTCATGGCAAAAA GAGGGGCGAGC GTG GCTCGATCCGC AGCAGCCGGTTCAAG Rcas_1885 2422603 - 2421536 - | galactose-1-phosphate uridylyltransferase TERM 1813 2422503 - 2422519 + g 74 -10.1 -3.74693 | overlap 2422504 GGCGGTTGTTCGACC TGCCCCT GCC AGGGGCG TTTGGTGCGGTGCGG TERM 1814 2423877 - 2423899 + r 95 -20.6 -2.52464 | GGTGGGCGCGCCTGA GGCGCGCCTC TCA GAGGCGCGCC TACATTGGCGGGCGG Rcas_1886 2425134 - 2423959 - | acetyl-CoA acetyltransferase Rcas_1887 2427612 - 2425189 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 1815 2427676 - 2427639 - R 73 -10.6 -3.6269 | gap 1, opp_overlap 2427646, overlap 2427637 2427641 2427644 TGATTTACAGAAACA GAGAAGC-GGGGACGTC TGAGC AACGCCCCCTGCTTCAC CTCCGCACAGGCTAC TERM 1816 2427674 - 2427641 - R 72 -11.8 -3.38696 | gap 1, opp_overlap 2427646, overlap 2427639 2427637 2427644 ATTTACAGAAACAGA GAAGC-GGGGACGTC TGAGC AACGCCCCCTGCTTC ACCTCCGCACAGGCT Rcas_1888 2428953 - 2427697 - | acyl-CoA dehydrogenase domain-containing protein TERM 1817 2428798 - 2428780 - G 72 -11.7 -3.35798 | ATCGTCGACCGAGAA CGAGCGC CCGCC GCGCTCG CGGATCGTGGGCCAG Rcas_1889 2430058 - 2428964 - | acyl-CoA dehydrogenase domain-containing protein Rcas_1890 2430628 - 2430077 - | sterol-binding domain-containing protein Rcas_1891 2432257 - 2431622 - | hypothetical protein Rcas_1892 2432692 - 2433960 + | extracellular ligand-binding receptor TERM 1818 2434001 - 2434033 + F 93 -17.2 -3.28712 | ATGAGATGAGCAGTT GACCCGAAGTGTTT GTCAG AAGCACTTCGGGTC TTATCAAAAGCAGGG TERM 1819 2434400 - 2434417 + G 100 -9.8 -5.03314 | GAGATTTTCATGGTT GGCGCC TTCGTT GGCGCC TTTTTTAGCGCTGCG Rcas_1893 2434064 - 2435245 + | inner-membrane translocator Rcas_1894 2435250 - 2436614 + | inner-membrane translocator Rcas_1895 2436626 - 2437420 + | ABC transporter related Rcas_1896 2437646 - 2438359 + | ABC transporter related Rcas_1897 2438563 - 2439126 + | hypothetical protein Rcas_1898 2441691 - 2439142 - | alanine racemase TERM 1820 2440615 - 2440671 + g 88 -16.4 -3.28791 | gap 2, opp_overlap 2440598, overlap 2440639 GCCGAGCACCGCGAT CCGGCGGCG-CGCCGGGAGCGCCGC-CA GGG TGCGCAGCGCCGCCAGCATCGCCGCCGG TTCTGCGCCGACCGT TERM 1821 2441625 - 2441603 - G 86 -7.6 -4.81551 | GAGTCATACGAAAAA CCGGTAAAGC GGC GCGTAACCGG AGGCGCTGTCAATCG Rcas_1899 2441874 - 2442143 + | hypothetical protein TERM 1822 2443992 - 2443950 - g 87 -19.3 -2.72344 | gap 1, opp_overlap 2443930 2443940, overlap 2443987 GGCTACGGCGAAGCA GCGCCGTTTCCGGCGT-TCA ACGG CGAGACGCAGGAAACGGCGC GCGCGGCGATCCTGG Rcas_1900 2443794 - 2444900 + | mandelate racemase/muconate lactonizing protein TERM 1823 2445407 - 2445433 + F 76 -10.2 -3.84246 | opp_overlap 2445407 CCTGCAACGATGCAA CGCGGATGAC CATGTCC GTCATCTGCG TTTGGTCGTTGCGCA Rcas_1901 2445485 - 2446909 + | glutamine synthetase, type I TERM 1824 2446937 - 2446965 + F 100 -16.8 -5.53079 | CCGGTGTACGGTGAG GCGGGACCGTTG CACCT CAACGGTCCTGC TTTTTTGTCTATTTT TERM 1825 2447152 - 2447176 + F 74 -7.1 -4.31549 | opp_overlap 2447146, overlap 2447170 TGCAACGAAGCAGCA TCCTGCGCC CGCGCGC GCCGCAGGA TTATTTTGCGTTTTG TERM 1826 2447547 - 2447562 + G 71 -4.6 -4.48299 | overlap 2447548 GGGGGATCGCATATG GCGCCA GCGT TGGCGG TTTCTTTGGATCTGA Rcas_1902 2447243 - 2448679 + | ammonium transporter TERM 1827 2448930 - 2448957 + F 78 -7.1 -4.62336 | gap 2 GTTTGGCGTATCAGT CGC-AGCAAC-GC CCCC GCTGTTGCTCGCG TTTTTCGCATCACCT TERM 1828 2449069 - 2449081 + F 74 -5.5 -4.52589 | overlap 2449056 2449055 GTCGCTCCCCCGGGA CAGTG GAG CGCTG TTTTGTGTACGCCAC TERM 1829 2450813 - 2450789 - g 70 -12.1 -3.21912 | opp_overlap 2450801 2450808 TGCCGAAGTGACGAA CCCGCCGATCG ACC CGATCCGCGAG GAACTGGTGATGTCC TERM 1830 2451117 - 2451132 + G 72 -11.8 -3.33737 | overlap 2451129 GTTGATGCGTATCGC GCGCCG ATCC CGGCGC TTCTGGCGCTTGGTG TERM 1831 2452563 - 2452577 + G 76 -5.6 -4.54727 | overlap 2452555 2452567 GTGTTGGCGGCATTG CTCGGC GCT GACGAG TTTTCGTTTGGCACG Rcas_1903 2449122 - 2453762 + | glutamate synthase (ferredoxin) TERM 1832 2453800 - 2453832 + T 83 -17 -2.53876 | TCCCCTTATCCCTCC TGCCCCCTGCTCCC ACACG GGGAGCAGGGGACG TCCATTCCGGTGGAA Rcas_1904 2454182 - 2453865 - | hypothetical protein Rcas_1905 2454475 - 2454179 - | hypothetical protein Rcas_1906 2454579 - 2454848 + | hypothetical protein Rcas_1907 2455628 - 2455389 - | hypothetical protein Rcas_1908 2455686 - 2455871 + | hypothetical protein Rcas_1909 2456636 - 2456043 - | hypothetical protein Rcas_1910 2457423 - 2457022 - | hypothetical protein TERM 1833 2457455 - 2457445 - R 76 -5.4 -4.64676 | overlap 2457447 2457448 TGACCTCCAACAAAA GATC AGG GATC CTGGGAAGCGCATGC Rcas_1911 2458051 - 2457575 - | hypothetical protein TERM 1834 2458250 - 2458270 + r 74 -12.5 -3.22298 | AACCATTGCTATGAC GCTGGCGCG GAC CACGCCAGC TTCCTCCTGGATCGC Rcas_1912 2458962 - 2458243 - | LuxR family transcriptional regulator Rcas_1913 2459823 - 2459068 - | hypothetical protein TERM 1835 2459817 - 2459785 - G 100 -19.2 -4.07885 | opp_overlap 2459772 2459774 GACTCTCGCCGAAAA CCCCGCAGCAGAGC CAGGT GCTCTGTTGCGGGG TATCACGACAGGTCT Rcas_1914 2460723 - 2459833 - | hypothetical protein Rcas_1915 2461352 - 2460765 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_1916 2462151 - 2461345 - | response regulator receiver protein Rcas_1917 2462399 - 2462136 - | hypothetical protein Rcas_1918 2463042 - 2462845 - | hypothetical protein Rcas_1919 2463478 - 2463095 - | HEPN domain-containing protein Rcas_1920 2463812 - 2463462 - | DNA polymerase beta subunit Rcas_1921 2464141 - 2463821 - | hypothetical protein Rcas_1922 2464389 - 2464126 - | hypothetical protein Rcas_1923 2465896 - 2464835 - | hypothetical protein Rcas_1924 2466510 - 2465902 - | hypothetical protein TERM 1836 2467172 - 2467114 - g 73 -11.5 -3.57144 | overlap 2467115 GCGGCGATCTGGAAA GCGGCTGACGGCGA-ACGCGCCTTCAGCG ACG CGCAGCGGGCGCGCATCGCCGCCTGGCG- GCGCGACGTAGCAGG TERM 1837 2467172 - 2467115 - g 84 -17.5 -2.74144 | gap 1, overlap 2467114 CGGCGATCTGGAAAG CGGCTGACGGCGA-ACGCGCCTTCAGCG ACG CGCAGCGGGCGCGCATCGCCGCCTGGCG GCGCGACGTAGCAGG Rcas_1925 2466814 - 2467428 + | two component LuxR family transcriptional regulator TERM 1838 2467887 - 2467903 + G 82 -3.6 -5.18643 | ATCTCCAGTCTGAGT CTCGTG CTGCT CTCGAG TTTTATTTTGATTGG Rcas_1926 2467425 - 2467952 + | hypothetical protein Rcas_1927 2467949 - 2468419 + | hypothetical protein Rcas_1928 2468496 - 2468774 + | hypothetical protein TERM 1839 2468925 - 2468949 + G 81 -4.1 -4.97402 | opp_overlap 2468932, overlap 2468928 CTGGACACTGGATCG GATCGAACCAC AGT GTGGGACGCTC TTTTTGTGGCTTTTG Rcas_1929 2468775 - 2469623 + | hypothetical protein TERM 1840 2471498 - 2471508 + G 86 -8.2 -4.57073 | overlap 2471494 TCACCGAATTGCTGC GCCG CGC CGGC TTTTTCGACAGCCTG Rcas_1931 2470645 - 2472432 + | hypothetical protein Rcas_1932 2473023 - 2474318 + | glycoside hydrolase family protein Rcas_1933 2474939 - 2475676 + | O-methyltransferase family protein TERM 1841 2475784 - 2475742 - f 90 -14.9 -3.53012 | overlap 2475743 2475746 TTCGCTCGGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 1842 2475783 - 2475743 - f 86 -18.4 -2.71712 | overlap 2475742 2475746 TCGCTCGGGGTAAAC GCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 1843 2475781 - 2475746 - f 88 -19.8 -2.64155 | gap 1, overlap 2475743 2475742 CTCGGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC TERM 1844 2475983 - 2476011 + G 74 -5.1 -4.59853 | overlap 2475987 CTCTTTGAGCCGGTG CGGATTGGACCGG TGA CCGCGCCAAATCG TTTTTACCAGGTTCC TERM 1845 2476601 - 2476585 - g 76 -9.3 -4.09822 | opp_overlap 2476587 2476588, overlap 2476588 AATCGAGGACACAAA GGACGCC GTC GGCGACC GCTGCGCAGTGGCGG TERM 1846 2476588 - 2476627 + G 74 -15 -2.50113 | gap 1, opp_overlap 2476585 2476588, overlap 2476587 CGAGGACACAAAGGA CGCCGTCGGCGACCGCTGC GCA GTGGCGGT-GCGGATGGCG GTTGATGAACTGCTC Rcas_1934 2475938 - 2478013 + | NADH:flavin oxidoreductase/NADH oxidase Rcas_1935 2478248 - 2478018 - | hypothetical protein Rcas_1936 2481084 - 2478442 - | ATP-dependent transcription regulator LuxR TERM 1847 2479724 - 2479686 - G 72 -12.3 -3.28712 | gap 1, overlap 2479687 GCGTTTCGGCGAGAA CGGCGCGCGCCGCGTGGA GTTC CCCGCGCAGCGCGGG-CG CATCCGGGAGCATAG Rcas_1937 2482188 - 2481379 - | rhodanese domain-containing protein Rcas_1938 2482976 - 2482311 - | hypothetical protein Rcas_1939 2484110 - 2482983 - | DNA methylase N-4/N-6 domain-containing protein TERM 1848 2483367 - 2483384 + g 82 -5.6 -4.91109 | CATAATAACCAGTTG TACGGA CTTCGC TCCGTA TTTTTGTAATACCGC TERM 1849 2484186 - 2484211 + r 83 -16.3 -3.02043 | opp_overlap 2484174 2484173 AAGTTGTGCATATTC GTAGCGCAAGA TTAA TCTTGCGCTAC TGTTACGCAAAAATT Rcas_1940 2484830 - 2484444 - | putative endoribonuclease L-PSP TERM 1850 2484964 - 2485001 + G 78 -14.9 -3.00003 | gap 1, opp_overlap 2484948, overlap 2484948 2484944 2484962 2484998 CGTCAGCGCGTATGC GCGCCTGACGCTGCGTTA TCG TGATGC-GCGTCTGGCGC TGGTTGTTGTGCTGG TERM 1851 2485080 - 2485093 + G 72 -3.7 -4.56597 | overlap 2485042 2485070 TCTTCGTCGGTTGGC CCGGC GACC GCCTG TTTTTGCAGGCAAGC TERM 1852 2485883 - 2485903 + G 81 -3.9 -5.02074 | overlap 2485885 GCCCCGCCGATGCCG CGCCTGGAA CAG TTCTGGGAG TTTTTTCCCGACTCG Rcas_1941 2484902 - 2487766 + | hypothetical protein TERM 1853 2487997 - 2488034 + G 73 -11.3 -3.54129 | gap 1, overlap 2487998 CGATAGCGGTCGGTC TGGCGCGACGGCG-GCAC ACG GTGCATGTTGTTGCGCCG TTTCACCCCGATGTG TERM 1854 2488047 - 2488085 + G 81 -10.3 -4.13014 | gap 1, overlap 2488042 CCGTTTCACCCCGAT GTGCGG-CGCGCGCCG GTTGAGTA CGGCGTGCGGTTGCAC TTTTACCGCTATGCC Rcas_1942 2487912 - 2489144 + | glycosyl transferase group 1 TERM 1855 2491175 - 2491143 - g 83 -7.6 -4.59773 | GGCGACCGGCAAAAA GCGTGCTCTGTTGC TGATC GCACCCGATCACGC ACGGACGGTCGATCC TERM 1856 2491360 - 2491372 + G 76 -9.1 -4.07687 | CCGCAACCGGCTCAA CCGCT CGA AGCGG TTTTCGGCAGCGAGT Rcas_1943 2489617 - 2491797 + | membrane protein-like protein TERM 1857 2492428 - 2492416 - g 74 -4.8 -4.54727 | opp_overlap 2492423 GCGCGTAAACTAAAA GTGG TGTCG CCAC TTGGCGTGTTTCTCG Rcas_1944 2492200 - 2492811 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Rcas_1945 2493536 - 2493931 + | hypothetical protein TERM 1858 2494030 - 2493988 - f 77 -11.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-AAGCG GGT CGCGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT TERM 1859 2495563 - 2495533 - g 78 -5.4 -4.71426 | opp_overlap 2495533 2495534, overlap 2495528 2495534 GCTGGATCAACAAAA CCGGCGTGTTCA CACCTAT CGAACACCCCGA TTATGAGACCGAGTC Rcas_1946 2494143 - 2496530 + | transketolase central region TERM 1860 2496561 - 2496532 - T 95 -18 -3.40371 | overlap 2496536 CATTGGATGAATGAA GCAACCCTGCAC GCCGTT GTGCAGGGTTGC ACCGATGAGATTCAG TERM 1861 2496557 - 2496536 - T 74 -11.6 -3.46824 | overlap 2496532 GGATGAATGAAGCAA CCCTGCAC GCCGTT GTGCAGGG TTGCACCGATGAGAT Rcas_1947 2497021 - 2496659 - | hypothetical protein Rcas_1948 2497155 - 2497940 + | tryptophan synthase, alpha subunit TERM 1862 2497988 - 2497978 - f 81 -4.6 -4.91511 | ACTTCACTACAAAAA GCGG TAA CCAC GAACGAACCACGAAG Rcas_1949 2498638 - 2499564 + | glycosyl transferase family protein TERM 1863 2500679 - 2500711 + G 71 -8.3 -3.96188 | overlap 2500695 GCGCTGGGGCGCTTT CTGCGGCGCTACAGC CTC GATGAACTGCCGCAG TTTATCAATGTCGTT Rcas_1950 2499587 - 2500999 + | undecaprenyl-phosphate galactose phosphotransferase Rcas_1951 2500999 - 2502471 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1864 2505097 - 2505068 - T 100 -21.5 -3.14211 | ACCCTGGTTGATGAA CGCCCCTCTCCCG CACG CGGGAGAGGGGCA GGGGGTGAGGGCAAC Rcas_1952 2505885 - 2505172 - | hypothetical protein TERM 1865 2505424 - 2505439 + g 88 -7.5 -4.91109 | CTCGCGCACGCCGAC GCGCG CATAGA CGCGC TTTTTGTCGTGCAGG Rcas_1953 2506607 - 2505882 - | hypothetical protein TERM 1866 2506151 - 2506164 + g 100 -9.5 -4.91109 | CGCGCACGCCGACAC GCGCG TAGA CGCGC TTTTTGTCGTGCAGG TERM 1867 2506703 - 2506689 - R 75 -8.6 -4.18465 | GTCCAAAAAAGACAA CCATCA ACG TGATGG CGAAAAAACCGAGTG Rcas_1954 2507103 - 2506669 - | hypothetical protein Rcas_1955 2507772 - 2507104 - | phospholipase/carboxylesterase TERM 1868 2507458 - 2507442 - GR 81 -13.7 -3.3785 | opp_overlap 2507439 TGAAGCCAGCGACAA CGACCCG CGA CGGGTCG GCATGGTATGCCTGC Rcas_1956 2508196 - 2507717 - | hypothetical protein TERM 1869 2507910 - 2507900 - GH 71 -8.2 -3.85698 | opp_overlap 2507900 2507908, overlap 2507885 2507901 GGGCGCCGCCAGAAA CGGC AGC GCCG CCAGGAGTGTGCCGG Rcas_1958 2508683 - 2509069 + | HEPN domain-containing protein TERM 1870 2509298 - 2509272 - g 70 -7.9 -3.98172 | ATCAATACCGAGAAA GGGCGCTCTGA ATTGA TCATTGCGCCC ATCCTGGTGGAGTTG Rcas_1959 2509104 - 2509727 + | hypothetical protein Rcas_1960 2511285 - 2509708 - | major facilitator transporter TERM 1871 2511198 - 2511173 - G 76 -13.9 -3.18366 | overlap 2511171 2511169 2511188 GCGCCAACGAATACA GCGGCGCAGAC CAGA GCCAGCGCCGC CTGTGGCTGCTGAAG Rcas_1961 2512030 - 2511305 - | hypothetical protein TERM 1872 2511880 - 2511912 + g 74 -9 -3.9392 | gap 1, opp_overlap 2511869, overlap 2511879 AGAACGCCAGGCTCT GCGC-TGCGCCTGTC GCCT GCCCGGCGCGCGCGC TTATTTCGGCTGGCG TERM 1873 2512043 - 2512053 + r 70 -3.2 -4.61231 | overlap 2512048 CATCGGTCTCCTCCT CGGA ACA TCTG TTTTTAGAGATGTCG Rcas_1962 2512479 - 2512057 - | GCN5-related N-acetyltransferase TERM 1874 2512750 - 2512792 + H 88 -13.5 -3.59979 | overlap 2512751 2512753 ATGGTCACTCTGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1875 2512751 - 2512791 + H 84 -17 -2.75844 | overlap 2512750 2512753 TGGTCACTCTGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 1876 2512753 - 2512788 + H 85 -18.4 -2.65354 | gap 1, overlap 2512751 2512750 GTCACTCTGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG TERM 1877 2512972 - 2513015 + H 100 -20.4 -3.59979 | gap 1 CATGGTCACTCCGAG CGGAGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1878 2514210 - 2514256 + G 81 -4.3 -5.00616 | overlap 2514212 ATGTGCCGCCGGGCG CAGCGGCGGTGC-GCCGTGCGCT GGC AGCGC-CGGAAGGATCGACGCTC TTTTTTGCCGGCGAA Rcas_1963 2513045 - 2514385 + | amine oxidase Rcas_1964 2515380 - 2514355 - | C4-dicarboxylate transporter/malic acid transport protein TERM 1879 2514487 - 2514472 - G 74 -4.7 -4.57073 | CAGCCCCCGGAAAAA GAGCA GGTTTG TGCTC GACGCCATCAATACC TERM 1880 2515189 - 2515178 - G 73 -3.6 -4.68103 | overlap 2515180 GCAATGGCAAGAAAA GCCG CCAG CGAC GCAACAAGCAGAATG Rcas_1965 2517169 - 2515520 - | YidE/YbjL duplication TERM 1881 2517219 - 2517191 - H 100 -13.8 -4.8543 | gap 1, opp_overlap 2517201, overlap 2517193 CAACTCGCACAAAAA GAGCGCCGTCCGC GTGT GCGG-CGGCGCAC ATGCATATCCTGGCG TERM 1882 2517217 - 2517193 - H 95 -15 -4.04397 | gap 1, opp_overlap 2517201, overlap 2517191 ACTCGCACAAAAAGA GCGCCGTCCGC GTGT GCGG-CGGCGC ACATGCATATCCTGG Rcas_1966 2517293 - 2517472 + | hypothetical protein Rcas_1967 2518040 - 2517615 - | response regulator receiver protein TERM 1883 2519081 - 2519108 + G 71 -13.4 -2.6155 | opp_overlap 2519074, overlap 2519080 GCCAGATATGCCGTC GTCGGCTGGCGC GTTC GCGCCACTCGAC ATTCGTGTTCCGGCG Rcas_1968 2518158 - 2519744 + | 5-oxoprolinase (ATP-hydrolyzing) Rcas_1969 2521212 - 2519824 - | hypothetical protein Rcas_1971 2522876 - 2522019 - | phospholipid/glycerol acyltransferase TERM 1884 2522145 - 2522110 - Gg 79 -15.6 -2.87344 | gap 1 GATTGGCGCCACACA GCGACGACATCAGCC CAGAAAC GGCTGATGTCG-CGC TTCCCGCGCAACAGG Rcas_1970 2521295 - 2522137 + | hypothetical protein TERM 1885 2522332 - 2522304 - GT 71 -6.6 -4.18488 | opp_overlap 2522304, overlap 2522305 ACCGACGCGAATAAA CGCTTCGGGGCG TTGCT CGCCGCGAAACT CATAGCGCAGTGCAA TERM 1886 2523124 - 2523106 - TR 70 -10.2 -3.53091 | opp_overlap 2523120 ATGTTCCTTGTGAAA CCCTGCGC CTC GCTCAGGG TGATGGTCGTCCCCT Rcas_1972 2525750 - 2523207 - | von Willebrand factor type A TERM 1887 2523983 - 2523993 + g 74 -4.6 -4.63218 | overlap 2523972 AATCGCGCAGCATCG GGTG GGG CGCC TTTTGTTCAGCGCGG Rcas_1973 2527591 - 2525747 - | hypothetical protein TERM 1888 2527449 - 2527469 + g 71 -11.1 -3.53012 | CGGCGGCTGCGCTCG CCTTCCACG CGG CGTGGCAGG TTTGCCCAGAGCAGC Rcas_1974 2528518 - 2527595 - | hypothetical protein TERM 1889 2527959 - 2527945 - GR 71 -5.6 -4.34947 | overlap 2527946 AACAGAGCACCAAAA GTCCGC CGC GCGGAT GCCGCCGCGCATACC TERM 1890 2528162 - 2528176 + gr 74 -11.4 -3.53444 | opp_overlap 2528162 CGTCCCGGCGAGCAA CTGCGC CGC GCGCAG TTTCGGCGGGGATCC Rcas_1975 2529902 - 2528490 - | hypothetical protein TERM 1891 2528988 - 2529011 + gr 77 -11.6 -3.61398 | overlap 2528959 TGCGAGCGCAGGGTC GCGGCGTTCG ATCG CGCGCGCCGC TTCTTCGAGGGCGCG TERM 1892 2529082 - 2529056 - GR 70 -10.1 -3.53012 | GCGCTTCTTGCGAAA GCGCACTCGCC TGATC GGCAAGTTCGC GCAGACGTTGCGCCG Rcas_1976 2531317 - 2529902 - | hypothetical protein TERM 1893 2531385 - 2531372 - H 72 -2.4 -4.83169 | AGGGTTGTATAAAAA GTCT ACCACA AGAC AACGACTTCTGCCTG TERM 1894 2532296 - 2532318 + G 91 -17 -3.35679 | opp_overlap 2532286 2532287 ACGAACTTGCGCATC GCGCAGCGCT CGA GGCGCTGCGC TTCTGGGTGGCGGCG TERM 1895 2532628 - 2532646 + G 74 -11.6 -3.4314 | opp_overlap 2532611, overlap 2532626 GCGCACCTGCCGCTC GCGCCACG CAT CGAGGCGC TCTTCTTCGCGTTTC TERM 1896 2532944 - 2532954 + G 74 -4.6 -4.59027 | overlap 2532938 2532942 ATCTGTTGTACGCCG GCGG CGG TCGC TTTTATGTGCTGCTT TERM 1897 2533128 - 2533148 + G 82 -11.1 -4.08767 | opp_overlap 2533131 2533142 GTTGACGCGCCGAAT CGACGACGT GAA ACGTCGCCG TTTTGCCGACCTCGA Rcas_1977 2532265 - 2534517 + | CRISPR-associated Csm1 family protein Rcas_1978 2534514 - 2534996 + | CRISPR-associated Csm2 family protein TERM 1898 2535232 - 2535218 - g 79 -9.2 -4.19817 | GTCACTCATGGAAAA GGCGCA TGG CGCGCC ACAAACGTTTCGAGT Rcas_1979 2535012 - 2535848 + | CRISPR-associated RAMP Csm3 family protein Rcas_1980 2535861 - 2537003 + | CRISPR-associated RAMP Csm4 family protein TERM 1899 2537260 - 2537240 - g 73 -8.9 -3.99374 | overlap 2537244 GCGCAGGAAGAAGAA CGCATCCGC CGG GCGGACGAG CGTCTGCGTCGTCAG TERM 1900 2538149 - 2538181 + G 79 -9.1 -4.19624 | overlap 2538148 TTCTATGCCGATCTG CGCGCGCGCCT GGAAAGGATGG ATGCGCGCGCG TTTCTGTTGCCCATC Rcas_1981 2537003 - 2538433 + | CRISPR-associated RAMP Csm5 family protein TERM 1901 2538888 - 2538918 + G 71 -11.1 -3.49475 | TCGCTGGATCATCGG CAGGAATGGGCGG ATTGA CCGCCTGATCCTG TTCTATACCGATCAA Rcas_1982 2538727 - 2540193 + | hypothetical protein TERM 1902 2541158 - 2541145 - f 70 -4.5 -4.56597 | gap 1 GCGGCTGCGGAAAAA CCG-GC ATC GCTCGG ATTACCTGTGACCAT Rcas_1983 2541533 - 2542396 + | hypothetical protein TERM 1903 2542949 - 2542969 + G 80 -14.7 -3.14132 | opp_overlap 2542925 GACGACCGCGCCTGG TCGCTGCGC CTG GCGCAGCGG TTCGTCGAAGGCAAA Rcas_1984 2542652 - 2543671 + | CRISPR-associated Cas1 family protein Rcas_1985 2543682 - 2543963 + | CRISPR-associated Cas2 family protein TERM 1904 2545310 - 2545284 - f 72 -2.3 -4.7657 | gap 1, overlap 2545291 GAAAAAGTGGAAAAA CCCCAAATCCCC GCCA GGGGA-TTGAAA CAAGGGGACCAAGTA TERM 1905 2546355 - 2546310 - f 90 -14.8 -3.65902 | gap 3 GCCAGGGGATTGAAA CCGCCCGCCGTCTGCCGCGCC TTCAGCG GGCGCGGC-G-CGG-GAGCGG GTGGAAAAACCCCAA TERM 1906 2547573 - 2547541 - f 71 -9.1 -3.84185 | opp_overlap 2547551 GGGATTGAAACACAA CGCACCTTCATGCTC CAA GAGCATGTAATCGCG TGGAAAAACCCCAAA TERM 1907 2548685 - 2548668 - f 86 -12.7 -3.96483 | AGGGGATTGAAACAA CGGCGGA CATA TCCGCCG AAATTGAAGAGGCGA TERM 1908 2548891 - 2548865 - f 72 -2.3 -4.7657 | gap 1, overlap 2548872 CAAAAAGTGGAAAAA CCCCAAATCCCC GCCA GGGGA-TTGAAA CAGAAAACCCCCGAA TERM 1909 2549357 - 2549331 - f 78 -7.3 -4.62069 | gap 1, overlap 2549333 2549338 GTTCGAGTGGAAAAA CCCCAAATCCCC GCCA GGGGA-TTGGCG TACGGGCAGGTCTGA TERM 1910 2549502 - 2549476 - f 70 -5.1 -4.56597 | gap 1, overlap 2549483 GTGCCGGTGGAAAAA CCCCAAATCCCC GCCA GGGGA-TCGGCG TACGGGCAGGTCTGA TERM 1911 2549606 - 2549664 + F 77 -10.9 -3.63569 | gap 2, overlap 2549606 2549608 2549613 TGGAGCAGGCGGGTC -GGGCGGGGATCGGGGT-GGGGGCGGGTC TCA GACCCGCCCCCTACCGTGGAATTCGCTCA TTGTTCACAGGTTCC TERM 1912 2549606 - 2549663 + F 84 -16.9 -2.7782 | gap 1, overlap 2549606 2549608 2549613 TGGAGCAGGCGGGTC GGGCGGGGATCGGGGT-GGGGGCGGGTC TCA GACCCGCCCCCTACCGTGGAATTCGCTC ATTGTTCACAGGTTC TERM 1913 2549608 - 2549661 + F 81 -15.9 -2.93252 | gap 1, overlap 2549606 2549606 2549613 GAGCAGGCGGGTCGG GCGGGGATCGGGGT-GGGGGCGGGTC TCA GACCCGCCCCCTACCGTGGAATTCGC TCATTGTTCACAGGT TERM 1914 2549724 - 2549698 - f 70 -5.1 -4.56597 | gap 1, overlap 2549705 GTGCCGGTGGAAAAA CCCCAAATCCCC GCCA GGGGA-TCGGCG TACGGGCAGGTCTGA Rcas_1986 2549978 - 2551408 + | hypothetical protein TERM 1915 2552532 - 2552552 + G 74 -5.3 -4.66163 | overlap 2552536 GCGCCGAGGGCGCGC TGGTGACGC ATT GCGTCTGCA TTTTTACCTGGGGAT Rcas_1987 2552108 - 2552740 + | orotate phosphoribosyltransferase Rcas_1988 2552774 - 2553898 + | glycosyl transferase group 1 Rcas_1989 2554213 - 2554500 + | hypothetical protein Rcas_1990 2554644 - 2555816 + | iron-containing alcohol dehydrogenase TERM 1916 2556036 - 2556064 + G 71 -11 -3.51032 | TTTTTCTTGACCATC GCGGCGTTGCTC AAAGA GAGTGATGCCGC TTATCATTCGGCGAT TERM 1917 2556783 - 2556798 + G 72 -2.5 -4.7497 | overlap 2556771 CGCTATGCGACCGGC GCCTA TGATCT TGGGC TTTTTGATCAATGGC Rcas_1991 2555979 - 2557322 + | membrane protein-like protein Rcas_1992 2557326 - 2558177 + | hypothetical protein Rcas_1993 2558261 - 2558686 + | hypothetical protein Rcas_1994 2559648 - 2561591 + | hypothetical protein TERM 1918 2561614 - 2561650 + T 100 -26.7 -3.09492 | opp_overlap 2561611 2561608 CCGGGTAAATCATTG CGGCGCAGGGATGGTGC ATC GCACCGTCTCTGCGCCG TCTTACCCTTCCGAA Rcas_1995 2562182 - 2561676 - | HNH endonuclease TERM 1919 2561705 - 2561742 + g 83 -17.1 -2.64616 | gap 1 ATTTGCGCCATACGT CGTGGCGTTCGAGTTCGC CCA GC-AGCGCGAACGCCACG TACTGTGGCTGACGG TERM 1920 2562277 - 2562297 + H 74 -12.5 -3.14132 | opp_overlap 2562276 2562273 CGCCTATGACATCAG CGGCGCTCG CGG CGAGCGCCA TTCGTGACGAGGACG TERM 1921 2562651 - 2562611 - H 76 -14 -3.01791 | overlap 2562597 ACCCCCGCGCGAACA CCGGCGCTCCCGC-CGGG GGACGGA CCCGCGCGCG-GCGCCGG TCTCCCCTCTCCCGC Rcas_1996 2562894 - 2564477 + | cell envelope-related transcriptional attenuator TERM 1922 2565082 - 2565122 + G 76 -7.4 -4.38154 | gap 1 ATGGCCCGCGCGCTC GCGGCGT-TGCAGCAGGGG ATCG CCGCCGCAGAACACGCCGC TTTTGTGAACCGTCT Rcas_1997 2564488 - 2565153 + | hypothetical protein TERM 1923 2566276 - 2566230 - g 71 -9.3 -3.73775 | gap 1, overlap 2566231 TCTACGGCGACGAAA TCGGACTGCCCGGCG-GCGTCG ATCC CGACGCGCGCCGCGCGATGCCA TGGGATCGACCGGAG TERM 1924 2566486 - 2566496 + G 73 -6.8 -4.3739 | opp_overlap 2566456, overlap 2566484 GCAGGTCGCCATTCC GGTC GCC GACC TTTTGTCCGACGGTC Rcas_1998 2565164 - 2566609 + | alpha amylase catalytic region Rcas_1999 2566606 - 2567295 + | hypothetical protein Rcas_2000 2567786 - 2568751 + | anti-sigma-factor antagonist TERM 1925 2569817 - 2569854 + F 74 -11.9 -3.46602 | gap 1, opp_overlap 2569803 2569800, overlap 2569821 ACCAGGGAGCCACGG GTCCCTGGCACGGCGCGC GGA GCGCGCCGT-CCTCGTAC TTGTCATGTCGAGCG TERM 1926 2569821 - 2569851 + F 79 -14.6 -2.88069 | opp_overlap 2569803 2569800, overlap 2569817 GGGAGCCACGGGTCC CTGGCACGGCGCGC GGA GCGCGCCGTCCTCG TACTTGTCATGTCGA TERM 1927 2570139 - 2570113 - f 79 -13.1 -3.53012 | gap 1, overlap 2570116 TCGCTGCGCTCGAAA TGACCAGGGAGC CGCC GCTCCCTGG-CA TAGCACGCGCCACGC TERM 1928 2570137 - 2570116 - f 81 -15.9 -2.90496 | overlap 2570113 CTGCGCTCGAAATGA CCAGGGAGC CGCC GCTCCCTGG CATAGCACGCGCCAC TERM 1929 2570848 - 2570868 + F 84 -11.2 -4.09374 | opp_overlap 2570844 2570845 2570848 CGCGAGTGAAAGCGA GAGAGTGG GTCTA CCACTCTC TTCTTCTTGTGTGTT Rcas_2001 2570928 - 2571290 + | ribosomal protein L21 Rcas_2002 2571280 - 2571537 + | 50S ribosomal protein L27 TERM 1930 2571823 - 2571811 - g 73 -3.3 -4.74103 | GCCGGAACCTAAAAA GCGCA GCC TGCTC AAGGAAATCTACGGC Rcas_2003 2571548 - 2571850 + | ribosomal protein L31 Rcas_2004 2572879 - 2571914 - | helix-turn-helix type 11 domain-containing protein Rcas_2005 2573335 - 2572895 - | hypothetical protein TERM 1931 2573136 - 2573106 - G 72 -11.9 -3.28712 | gap 1, opp_overlap 2573128 2573129 2573131, overlap 2573128 CCGGTGCTGTGAGAA CGCTGACCGATCGC CGAC GCAACCGG-CAGCG CCGCTTCTTCTCGCG TERM 1932 2573600 - 2573583 - g 81 -12.7 -3.79747 | opp_overlap 2573592 CTATGGAGCAGGAAA GCGCGCT CGCC AGCGCGC AGCGCCAGTTCGATA Rcas_2006 2573564 - 2574817 + | Glu/Leu/Phe/Val dehydrogenase TERM 1933 2575066 - 2575043 - g 71 -9.4 -3.68244 | opp_overlap 2575042 2575045 2575059, overlap 2575044 ATCACTAATGCCAAA CGCGCGCGCC TGAT GGCGCTCGCC GATGCGTTCCTCGCG Rcas_2007 2574824 - 2575198 + | hypothetical protein TERM 1934 2575420 - 2575455 + G 77 -2.5 -5.06414 | gap 1, overlap 2575441 AGATTCAGAACAATG CGTCGCTCTACCATGG GTTGA CCATCG-AGGACGGCG TTTTTATTGGACCGC Rcas_2008 2575236 - 2575796 + | hexapaptide repeat-containing transferase TERM 1935 2575801 - 2575786 - f 70 -4.7 -4.5032 | TACAGGAACAACAAA CCACT TCGTAG AGTGG CAACCGCGCGAGAAT Rcas_2009 2575835 - 2576266 + | CBS domain-containing protein TERM 1936 2576445 - 2576475 + G 70 -11.9 -3.22298 | gap 1, opp_overlap 2576461 TTGCGTCACGCATTG CTCCGTCC-CGATC AAAC GGTCGTGGACGGGG TTGATGATGCCTGGG Rcas_2010 2576295 - 2577407 + | DNA methylase N-4/N-6 domain-containing protein Rcas_2011 2578908 - 2577544 - | dihydrolipoyllysine-residue succinyltransferase Rcas_2012 2579888 - 2578920 - | transketolase central region TERM 1937 2579867 - 2579820 - G 76 -9.1 -4.05446 | gap 1, opp_overlap 2579819, overlap 2579823 CTCGCCAATGATAAA GACGCGCT-CGTCCTGCATTGC GTCCT GCAATGCCTGGCGCAGCGCCTC GCGAACAGTGATGAC Rcas_2013 2580953 - 2579892 - | pyruvate dehydrogenase (acetyl-transferring) Rcas_2014 2582257 - 2581340 - | hypothetical protein TERM 1938 2582294 - 2582283 - H 76 -7.2 -4.5265 | overlap 2582285 AAGTATAGCAGAAAA CCGG CGAT CCGG CAACGTTGATTCGGC Rcas_2015 2582455 - 2583690 + | RNA-binding S1 domain-containing protein Rcas_2016 2583779 - 2586322 + | ATPase TERM 1939 2586353 - 2586390 + F 100 -15 -5.02074 | gap 1, overlap 2586355 CATCCCTTCTGATCC CGGAGCCGAAGCAG-TC GTTCA GATCTGCTTCGGCTCGG TTTTTTGGCGGGTCG TERM 1940 2586355 - 2586388 + F 79 -16.2 -2.75975 | gap 1, overlap 2586353 TCCCTTCTGATCCCG GAGCCGAAGCAG-TC GTTCA GATCTGCTTCGGCTC GGTTTTTTGGCGGGT TERM 1941 2586520 - 2586541 + F 85 -8.8 -4.62069 | opp_overlap 2586520 TTATCCCTTGCAGAA GAGACGTT ACACGC AACGTCTC TTTTTGCAATGCACA TERM 1942 2587357 - 2587374 + G 72 -4.1 -4.62069 | gap 1, overlap 2587360 AGAATCGCTTTGGCT CGACCGAT GAA GTCGG-CG TTTTTGAGATGACGG Rcas_2017 2586585 - 2587979 + | DNA repair protein RadA Rcas_2018 2587963 - 2589057 + | PilT domain-containing protein TERM 1943 2589067 - 2589045 - f 73 -13.4 -2.71681 | GAATGTGGTGAAGCA GGGACCGGTC TGA GACCGGTCCG GGCGATGGGCGCCAT TERM 1944 2590722 - 2590690 - g 83 -12.7 -3.92869 | gap 1 TTATGGATCGAGAAA CGCGC-GAGCCAGC GCGCGT GCTGGCGCAGCGCG TGATGGACGAATCGT Rcas_2019 2589471 - 2590868 + | aminotransferase class-III Rcas_2020 2591375 - 2590872 - | hypothetical protein TERM 1945 2591155 - 2591141 - G 88 -6.4 -5.1101 | CGATTACCCAAAAAA TGACCG ACC CGATCA GTGCGCCGACTCCTG TERM 1946 2591435 - 2591478 + H 73 -10.2 -3.59979 | gap 1, opp_overlap 2591438, overlap 2591428 2591434 2591439 CATGGTCACCCCGAG CAACGCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 1947 2591439 - 2591474 + H 85 -18.4 -2.65354 | gap 1, opp_overlap 2591438, overlap 2591428 2591434 2591435 GTCACCCCGAGCAAC GCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGC TGCGTTTACCCTGAG TERM 1948 2592539 - 2592549 + G 72 -2.4 -4.72272 | GGATACCCTATCTTA ACGG CGC CCGC TTTTTCATCAAGGGG Rcas_2021 2591656 - 2593830 + | glycoside hydrolase family protein Rcas_2022 2593844 - 2595034 + | amidohydrolase TERM 1949 2595265 - 2595225 - T 86 -14.9 -3.33969 | opp_overlap 2595225 2595224 2595217 2595236, overlap 2595227 2595236 CAACGTATCGGAGAA CACATGGTAAAGACGTTGC GAT GCAACATCTTTACCATGAC CTTCCTGATGATTCC TERM 1950 2595263 - 2595227 - T 100 -21.9 -3.23572 | opp_overlap 2595225 2595224 2595217 2595236, overlap 2595225 2595236 ACGTATCGGAGAACA CATGGTAAAGACGTTGC GAT GCAACATCTTTACCATG ACCTTCCTGATGATT Rcas_2023 2595861 - 2595280 - | PfpI family intracellular peptidase Rcas_2024 2596402 - 2597874 + | protoporphyrinogen oxidase TERM 1951 2598052 - 2598066 + G 76 -5.6 -4.56597 | overlap 2598036 GATGAAGCGCACCCT CGGCGG TCA TCGTCG TTTTTCGCGGGCAGG Rcas_2025 2597924 - 2598544 + | DNA binding domain-containing protein Rcas_2026 2598556 - 2599833 + | glutamyl-tRNA reductase Rcas_2027 2599862 - 2600563 + | chlorite dismutase Rcas_2028 2600567 - 2601625 + | uroporphyrinogen decarboxylase Rcas_2029 2601618 - 2602559 + | ferrochelatase Rcas_2030 2602556 - 2603467 + | porphobilinogen deaminase Rcas_2031 2603472 - 2604281 + | uroporphyrinogen III synthase HEM4 Rcas_2032 2604866 - 2605849 + | delta-aminolevulinic acid dehydratase TERM 1952 2606112 - 2606122 + G 76 -8.2 -4.15044 | overlap 2606104 TTCGCGCCGTCGGCG GCGC GCC GCGC TTTATTGCGCGCGGC Rcas_2033 2606015 - 2607319 + | glutamate-1-semialdehyde-2,1-aminomutase TERM 1953 2607352 - 2607363 + F 89 -7.2 -5.0916 | GCACAGGTCGCAAGC CCGG TCAA CCGG TTTTTATCTTGAAAC TERM 1954 2608027 - 2608058 + G 76 -7.2 -4.25104 | gap 1, overlap 2608017 CACCTCTGCGCCTGC CGCCGTCTCG-TGGG GTG CGCAGCGAGTCGGTG TTTTCGTGCGCGGCA Rcas_2034 2607419 - 2608534 + | hypothetical protein Rcas_2035 2609200 - 2610036 + | hypothetical protein TERM 1955 2610605 - 2610620 + G 73 -3.2 -4.78753 | ATGCATTACCCCCAA TCTACC GCCA GGGAGA TTTTGTTCGTGTTGG Rcas_2036 2610130 - 2610804 + | hypothetical protein Rcas_2037 2611804 - 2610863 - | putative transmembrane anti-sigma factor Rcas_2038 2612438 - 2611821 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1956 2612559 - 2612524 - R 100 -16.2 -4.371 | opp_overlap 2612521 2612530, overlap 2612525 CCTATTATAGCAAAA GCGCAACCCTGCCG TATCGCAC CGGCAGGGTTGCGT CCACTTCATCAGGAT TERM 1957 2612558 - 2612525 - R 91 -19.7 -3.21778 | opp_overlap 2612521 2612530, overlap 2612524 CTATTATAGCAAAAG CGCAACCCTGCCG TATCGCAC CGGCAGGGTTGCG TCCACTTCATCAGGA Rcas_2039 2613762 - 2612614 - | homoserine O-acetyltransferase Rcas_2040 2615237 - 2613951 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 1958 2615339 - 2615296 - H 79 -8.9 -4.26871 | gap 2, opp_overlap 2615300, overlap 2615297 2615300 CAAGGCAGCAACAAA TCCAGTGCAGCACACCTGCAC TCGT GTGCAGGCGTGCTGC-C-GTT CCAGCAATCTCTCGT TERM 1959 2615338 - 2615297 - H 74 -12.4 -3.154 | gap 2, opp_overlap 2615300, overlap 2615296 2615300 AAGGCAGCAACAAAT CCAGTGCAGCACACCTGCAC TCGT GTGCAGGCGTGCTGC-C-GT TCCAGCAATCTCTCG TERM 1960 2615336 - 2615300 - H 88 -19.6 -2.77283 | gap 1, opp_overlap 2615300, overlap 2615297 2615296 GCAGCAACAAATCCA GTGCAGCACACCTGCAC TCGT GTGCAGGCGTGCTGC-C GTTCCAGCAATCTCT TERM 1961 2615361 - 2615383 + H 70 -12.1 -2.89564 | opp_overlap 2615347 2615374 2615375, overlap 2615377 ATCTCTCGTGCAGCG TGAGGGCAA CAAAT TTGCCCTCA TCTGTACGATGAGGG TERM 1962 2615377 - 2615399 + H 88 -13.5 -3.60814 | opp_overlap 2615347 2615375 2615374, overlap 2615361 GAGGGCAACAAATTT GCCCTCATC TGTAC GATGAGGGC TTCTGTGTGAGCTTT Rcas_2041 2615887 - 2616255 + | hypothetical protein TERM 1963 2616258 - 2616300 + F 70 -9.9 -3.54424 | opp_overlap 2616260 2616263, overlap 2616260 2616263 CGGTCGCTGGTAGAT AAGCAGGGGCGTGCGAT ATCCAATTC ATCGCACGCCTCTCCTC TTTGCAGAGATGGAA TERM 1964 2616298 - 2616260 - f 74 -11 -3.48276 | opp_overlap 2616260 2616258 2616263, overlap 2616263 GTCGCTGGTAGATAA GCAGGGGCGTGCGATA TCCAATT CATCGCACGCCTCTCC TCTTTGCAGAGATGG TERM 1965 2616260 - 2616298 + F 76 -12.5 -3.35046 | opp_overlap 2616260 2616263, overlap 2616258 2616263 GTCGCTGGTAGATAA GCAGGGGCGTGCGAT ATCCAATTC ATCGCACGCCTCTCC TCTTTGCAGAGATGG TERM 1966 2616263 - 2616295 + F 70 -12.8 -2.84325 | opp_overlap 2616260 2616263, overlap 2616260 2616258 GCTGGTAGATAAGCA GGGGCGTGCGAT ATCCAATTC ATCGCACGCCTC TCCTCTTTGCAGAGA Rcas_2042 2616865 - 2618889 + | Fis family GAF modulated sigma54 specific transcriptional regulator Rcas_2043 2619351 - 2620073 + | MIP family channel protein Rcas_2044 2620209 - 2621210 + | dihydroxyacetone kinase, DhaK subunit Rcas_2045 2621214 - 2621846 + | dihydroxyacetone kinase, L subunit TERM 1967 2622835 - 2622848 + F 70 -3.8 -4.69622 | overlap 2622820 TGGTGCAGTGGCTGC GCGA TAATCT TCGC TTTTTCGACTTCTCT TERM 1968 2623217 - 2623203 - f 86 -12.8 -3.90744 | GTTTCGCGGAAACAA CGGCGC TGG GCGCCG CCTATGCCGCCGGTC Rcas_2047 2623529 - 2624086 + | ribosomal RNA adenine methylase transferase TERM 1969 2624197 - 2624152 - f 93 -15.6 -3.59979 | gap 3 TTCGCTCAGGGTAAA CGCAGCGCG--GAATC-TGCGCG GGT CGCGCACGACCCTGCGCGCTGCG CGGGGTGACCATGCC TERM 1970 2624764 - 2624804 + G 71 -5.1 -4.39828 | overlap 2624761 2624765 2624799 ACCGCCTGGGGTTGC ACGCCCGACCGGCGGCATT ATT GGTGCAGACGGCAGGGCGC TTTTGTGCCGATGTT Rcas_2048 2624253 - 2626769 + | phosphoenolpyruvate-protein phosphotransferase Rcas_2049 2627627 - 2627211 - | single-strand binding protein Rcas_2050 2629662 - 2628970 - | hypothetical protein TERM 1971 2630045 - 2630025 - R 85 -16.9 -2.88861 | opp_overlap 2630008 2630025 GACCATCGCCAGAGA TCGCCGGTC ATT GACCGGCGA TTTGTATTTCTTCAG TERM 1972 2630025 - 2630045 + r 100 -16.9 -4.46072 | opp_overlap 2630025, overlap 2630008 GACCATCGCCAGAGA TCGCCGGTC ATT GACCGGCGA TTTGTATTTCTTCAG Rcas_2051 2630659 - 2630057 - | disulphide bond formation protein DsbB Rcas_2052 2630784 - 2631401 + | pyrrolidone-carboxylate peptidase TERM 1973 2631700 - 2631735 + T 72 -13.4 -2.65354 | gap 1, overlap 2631698 2631696 GTCACCCCGAGCAGG GCGAGGAGTCTTGCACG ACC CGTTC-AGATTCCTCGC TGCGTTTACCCTGAG Rcas_2053 2634896 - 2633454 - | prolyl-tRNA synthetase TERM 1974 2634435 - 2634480 + g 75 -11.7 -3.56568 | opp_overlap 2634433 2634432, overlap 2634436 CTGCCAGAGGAACTC GGTGGTGCGCAGGAAGGGGCG GGTG CGCATCTCCCAGCGCATCACG TTTGCCCACTGATTG TERM 1975 2634436 - 2634479 + g 78 -15.2 -2.73619 | opp_overlap 2634433 2634432, overlap 2634435 TGCCAGAGGAACTCG GTGGTGCGCAGGAAGGGGCG GGTG CGCATCTCCCAGCGCATCAC GTTTGCCCACTGATT Rcas_2054 2635561 - 2634950 - | hypothetical protein TERM 1976 2635295 - 2635281 - G 100 -10 -4.84918 | overlap 2635274 CGCACAAACAGAAAA TCCGGT TGT ACCGGA TCACACCCTGGCATG Rcas_2055 2637795 - 2635606 - | glycosyl transferase family protein TERM 1977 2637324 - 2637346 + g 70 -7.6 -3.99324 | CTAGATCACGTTCAT CTCCGCGTGG ACG CCACGTAGGG TTTGTGATCATCAAC Rcas_2056 2638648 - 2637866 - | hypothetical protein TERM 1978 2637965 - 2637991 + g 70 -10 -3.61398 | GATGCGCGCTTTCCA GGCGTCGATGCC GCC GGCAGCGGCGAC TTCTTCGGGAAAGCG TERM 1979 2638599 - 2638553 - G 74 -4.6 -4.60889 | gap 3, opp_overlap 2638569, overlap 2638557 2638558 AACGATTCCGAAAAA GATACGCTGCAACACAGGCGCAA TCCG TTCCGCCTG-GTTGC-GCA-ACC GACCTTCCGGATCGT Rcas_2057 2639353 - 2638658 - | ribulose-phosphate 3-epimerase TERM 1980 2639832 - 2639846 + G 75 -4.2 -4.80882 | overlap 2639833 GGCGTATCCTGTATA CGGCAA GCA TTGCCC TTTTTGGTCTGGGGT TERM 1981 2640663 - 2640685 + G 74 -6.2 -4.49939 | opp_overlap 2640663, overlap 2640664 TGGTGCTGGAAGGCA CGCTGGCGAA CGT TTTGCCGGCA TTTTATGGATTCTCT Rcas_2058 2639603 - 2641018 + | major facilitator transporter Rcas_2059 2641145 - 2641612 + | hypothetical protein Rcas_2060 2642090 - 2641626 - | FHA domain-containing protein Rcas_2061 2642859 - 2642131 - | FHA domain-containing protein Rcas_2062 2644015 - 2643071 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Rcas_2064 2648334 - 2647342 - | dihydroorotate dehydrogenase 2 TERM 1982 2648232 - 2648203 - G 72 -4.1 -4.62203 | opp_overlap 2648209, overlap 2648205 2648208 TTCAAACAACGAAAA GAGCACGACGGCA GCGG CGCCGGCTTCCTC CAGGCGACGAACATT Rcas_2065 2648567 - 2649955 + | cyclic nucleotide-binding protein Rcas_2066 2652305 - 2653483 + | peptidase M24 Rcas_2067 2654313 - 2653459 - | hypothetical protein TERM 1983 2654160 - 2654196 + g 83 -15 -3.53012 | GGCTGAGCATCCGGC GCGCCGCCGCGCGCTG CGCAA CGACGCGGGGTGGCGC TTTGGGCAGGCGACG Rcas_2068 2654902 - 2654324 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_2069 2655074 - 2655367 + | hypothetical protein Rcas_2070 2656770 - 2655583 - | phosphoglycerate kinase TERM 1984 2656208 - 2656248 + g 71 -12.6 -3.05384 | gap 1, opp_overlap 2656202 2656201, overlap 2656203 GTGACAAATGGCCGC GCCGGATTTTCCAGCGCTC CCTG GAGCGC-GGCGAGTTCGGC TTCCATCAGGAAGCC Rcas_2071 2656920 - 2657639 + | short-chain dehydrogenase/reductase SDR Rcas_2072 2658893 - 2657757 - | hypothetical protein TERM 1985 2658321 - 2658311 - G 75 -3.2 -4.84359 | CGATGTCGATAAAAA CGTC TTC GACA TCCCCCTGCACAAGA TERM 1986 2658474 - 2658491 + g 70 -9.8 -3.53811 | CACCTGTTCCTCGCC GGCGCG GTCGCG CGCGCC TTTGGCGAGCGTCAG TERM 1987 2659509 - 2659527 + G 73 -8.8 -4.07568 | GCGTTGAGCATCGCA TTCGCTGC GGT GCAGCGCA TTTTGCACCCGCAAC TERM 1988 2659917 - 2659949 + G 100 -14.7 -4.1347 | GGAATTGTGTTTCAT GCGCTGCGCACGCGG CAA TCGGGGGCGCGGCGC TTTGTGTCGTTCCAC Rcas_2073 2659221 - 2660147 + | cation diffusion facilitator family transporter Rcas_2074 2661723 - 2660284 - | amine oxidase Rcas_2075 2662782 - 2661814 - | alcohol dehydrogenase Rcas_2076 2663960 - 2662818 - | IS605 family transposase OrfB TERM 1989 2662873 - 2662889 + g 79 -9.4 -4.1964 | overlap 2662866 CCGCTTACGCCCCAA CGGGCT TGTCC AGCCCG TTTTAGGATGTTCAC TERM 1990 2664228 - 2664270 + r 86 -13.6 -3.50393 | gap 3, opp_overlap 2664228 AAAGCCGACGAGAAA CCCGCC-TAA-CCGCTCGCAC TCAA GTGCG-GCGGCTTGCGGCGGG TTCTATAAGGTCAAA TERM 1991 2664270 - 2664228 - R 82 -11.4 -3.98236 | gap 3, opp_overlap 2664228 AAAGCCGACGAGAAA CCCGCC-TAA-CCGCTCGCAC TCAA GTGCG-GCGGCTTGCGGCGGG TTCTATAAGGTCAAA Rcas_2077 2667968 - 2664273 - | alpha amylase catalytic region TERM 1992 2666938 - 2666962 + g 85 -9.9 -4.25104 | overlap 2666939 GCCATCGTGTCGAGT TCCTCGTCCGG CAC CTGGTCGAGGG TTTTGATCGGGCGAC TERM 1993 2667382 - 2667364 - G 81 -3.8 -5.00616 | overlap 2667365 TGCGTGGCGAAAAAA CGATCCAG TTC CTCGATCA TCTTGAGATAGACGG TERM 1994 2667651 - 2667680 + g 70 -9.9 -3.61178 | opp_overlap 2667650, overlap 2667647 ATTGAGCCAGGCAAG CGCGTCGGCGAGC ATGT GTTCGCGGGTGCG TTTGCGGTACGTGGC TERM 1995 2668504 - 2668519 + G 80 -4.6 -4.83615 | GATGGCGCCGCGCAT CTCGGG CGAA CCGGAG TTTTTGTCGCGCCTG TERM 1996 2668792 - 2668746 - g 83 -14.9 -3.49475 | opp_overlap 2668746 2668748 2668773 2668774 GTGATGCGCAGACAA CCGCACCGCGCCTGGCGGTGC TCTTT GCGCAGCCCGGCGCAGCCCGG CGGGCTGCATTCATC TERM 1997 2668748 - 2668766 + G 72 -11.7 -3.34398 | opp_overlap 2668746, overlap 2668746 GATGCGCAGACAACC GCACCGC GCCTG GCGGTGC TCTTTGCGCAGCCCG TERM 1998 2668773 - 2668801 + G 70 -11.6 -3.19463 | opp_overlap 2668746, overlap 2668774 TGGCGGTGCTCTTTG CGCAGCCCGGCG CAGCC CGGCGGGCTGCA TTCATCGATGCTGCA TERM 1999 2668774 - 2668800 + G 76 -15.1 -2.51464 | opp_overlap 2668746, overlap 2668773 GGCGGTGCTCTTTGC GCAGCCCGGCG CAGCC CGGCGGGCTGC ATTCATCGATGCTGC Rcas_2078 2668352 - 2669107 + | hypothetical protein Rcas_2079 2669224 - 2670246 + | rhodanese domain-containing protein TERM 2000 2670305 - 2670265 - g 71 -13.4 -2.53382 | gap 1, opp_overlap 2670275 ACGATGTCGAATGCA TTGCCAGGGAGCAGCCCGA CTGA TCGGGCTGCT-CCTTCCAA AACTGAATTGACTGC TERM 2001 2670275 - 2670296 + G 78 -15.9 -2.71364 | opp_overlap 2670265 ATGCATTGCCAGGGA GCAGCCCGA CTGA TCGGGCTGC TCCTTCCAAAACTGA TERM 2002 2670433 - 2670479 + G 71 -4.9 -4.45484 | gap 1, overlap 2670438 2670441 2670465 2670466 GCGGCGCTTTCCCTG CTGATCGGCGCCGCGCTCGGTG TCGC CTTCGAGCGCGG-GAGGTTCTG TTTCTTCTGTATCTT Rcas_2080 2670253 - 2671491 + | protein of unknown function DUF395 YeeE/YedE Rcas_2081 2671737 - 2672420 + | hypothetical protein Rcas_2082 2673995 - 2672454 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Rcas_2083 2675271 - 2674060 - | hypothetical protein TERM 2003 2675399 - 2675442 + H 82 -12.4 -3.59979 | gap 1 CATGGTCACCCCGAG CGGAGCGAGGGGTCGTGCGCG ACC CGCTT-CGATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2084 2675864 - 2676766 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase Rcas_2085 2678290 - 2676800 - | hypothetical protein Rcas_2086 2679863 - 2678796 - | homoserine dehydrogenase TERM 2004 2680201 - 2680216 + G 81 -7.5 -4.39407 | overlap 2680203 2680204 2680211 TGTTTCACCATCTGT CGCCG GAGACG CGGCG TTTTCGCTTCTTTAC Rcas_2087 2680059 - 2680622 + | GCN5-related N-acetyltransferase TERM 2005 2680885 - 2680923 + F 86 -13.7 -3.55444 | ACGTTTCCTCTCATG CGTGACCGCGCGCGGCG AGACG CGCCCCGTGCGGGCAGG TTTGAGACCTGCGCC Rcas_2088 2681114 - 2681470 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Rcas_2089 2681937 - 2682743 + | NADH-quinone oxidoreductase, B subunit TERM 2006 2683087 - 2683073 - g 73 -7 -4.25848 | overlap 2683074 AACTGGTCATCAAAA CCCGCG TGC CGCGCG ACAATCCGGTTGTGC Rcas_2090 2682721 - 2683290 + | NADH dehydrogenase (ubiquinone) 30 kDa subunit Rcas_2091 2683311 - 2684435 + | NADH dehydrogenase (quinone) TERM 2007 2684639 - 2684623 - g 78 -6.5 -4.58859 | AAATAGAACAAGAAA CGTCGGA GAC TCAGACG ACGCGGGGTAAGGTC TERM 2008 2685364 - 2685348 - g 79 -10.8 -3.85698 | overlap 2685349 GCGCCCGCCGATAAA GCCGCG CGCCT CGCGGC TGCGCGCGCGCGGGC TERM 2009 2685377 - 2685349 - g 74 -13.8 -2.91276 | gap 1, overlap 2685348 CGCCCGCCGATAAAG CCGCGCGCCTCGC GGCT GCGCG-CGCGCGG GCCGCTGAAAAAGCC TERM 2010 2685679 - 2685651 - g 76 -10.1 -3.92869 | GCACCGACCGACAAA GCCGCGCGCCTGG CGG CCATTCGCGCCGC GAACGCAGCGAAAAA TERM 2011 2685709 - 2685696 - g 84 -3.7 -5.10497 | opp_overlap 2685701 2685702 AACGCAGCGAAAAAA GCGGC TGAA GGCGC GCCCGCTGCTGGCGG Rcas_2092 2684598 - 2685947 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2012 2686859 - 2686884 + G 71 -8.1 -3.91798 | overlap 2686866 TACATCCTCAACTTT GCGCTGTCGGC GCTC GCCGCCGTCGC TTTCCTTGGCGGTTG Rcas_2093 2685962 - 2687320 + | NADH dehydrogenase (quinone) Rcas_2094 2687348 - 2688001 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Rcas_2095 2688056 - 2688382 + | NADH-ubiquinone oxidoreductase chain 4L Rcas_2096 2689201 - 2691381 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 2013 2692986 - 2693010 + G 74 -12.2 -3.44284 | gap 1, overlap 2692979 2692985 CTGTTTCAGATGGTG GCGCA-CGGTC TTTC GACCGGTGCGC TCTTCTTGCTGGCGG Rcas_2097 2691768 - 2693468 + | proton-translocating NADH-quinone oxidoreductase, chain M Rcas_2098 2693476 - 2694993 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 2014 2695859 - 2695891 + G 81 -2.6 -5.18726 | gap 1, opp_overlap 2695858, overlap 2695857 2695854 2695867 AACGCGCCAGAGAAG CCGGTCAACTGACCG CCGT CGGTTTGG-GACTGG TTTTTATTGTCGGGC Rcas_2099 2695720 - 2697342 + | proton-translocating NADH-quinone oxidoreductase, chain N Rcas_2100 2697461 - 2698024 + | hypothetical protein TERM 2015 2698180 - 2698213 + F 76 -13.9 -3.05463 | gap 1, overlap 2698175 AGGATTTGCCTGATC TGAGCGCCGATCATCG TTC CGGTGG-CGGCGCTCG TTGCCTGGGCAGCGT TERM 2016 2698361 - 2698340 - f 74 -10.9 -3.55801 | gap 1 ACGAACTGTCGCAAA TGAG-CGGCG TCC CGCCGACTCA GGGCATCGCGCATAA TERM 2017 2699682 - 2699719 + G 73 -8.9 -3.9777 | gap 1 GATTATCGCGGTTGC CGCCGCGACCGGCCGGCG ATA CGCCG-CCAGCCGAGACG TTTCTGCGTGTTGAA Rcas_2101 2698472 - 2700412 + | hypothetical protein TERM 2018 2700979 - 2700965 - f 88 -7 -5.00884 | overlap 2700967 ACTTCGCCGAAAAAA GGGGCG CAT CGCCAC GCTCTACACCGCCCC Rcas_2103 2701415 - 2702209 + | abortive infection protein Rcas_2104 2702634 - 2704049 + | dihydrolipoamide dehydrogenase Rcas_2105 2704068 - 2704433 + | hypothetical protein Rcas_2106 2706028 - 2705393 - | short-chain dehydrogenase/reductase SDR Rcas_2107 2708639 - 2706219 - | peptidase S16 lon domain-containing protein Rcas_2108 2709644 - 2708694 - | putative agmatinase Rcas_2109 2709889 - 2710446 + | hypothetical protein Rcas_2110 2710683 - 2712890 + | extracellular solute-binding protein Rcas_2111 2712985 - 2713971 + | binding-protein-dependent transport systems inner membrane component Rcas_2112 2713991 - 2715121 + | binding-protein-dependent transport systems inner membrane component TERM 2019 2715792 - 2715764 - g 78 -12.4 -3.72576 | gap 1 GGTTTCCCGATCAAA GCCGAAGCGCCGC CGGA GCAGCGC-CCGGC AGCGCAGGAGATCGG Rcas_2113 2715191 - 2716186 + | hypothetical protein TERM 2020 2716285 - 2716265 - T 82 -14.7 -3.23899 | overlap 2716260 CGCGAATCAACGGAA GCGCTCCGG GCG CCAGAGCGC GATAGCTGTCATCCC Rcas_2114 2717852 - 2716338 - | ABC transporter related Rcas_2115 2719010 - 2717916 - | sugar ABC transporter, periplasmic sugar-binding protein Rcas_2116 2720109 - 2719087 - | monosaccharide-transporting ATPase TERM 2021 2719784 - 2719770 - G 73 -8.5 -4.04206 | GCAGTGCCAGAGAAA CGCCG ACCCA CGGCG ACCAACCCATGGTAT Rcas_2117 2721390 - 2720149 - | mandelate racemase/muconate lactonizing protein Rcas_2118 2722197 - 2721415 - | short-chain dehydrogenase/reductase SDR Rcas_2119 2723335 - 2722187 - | extracellular solute-binding protein TERM 2022 2722559 - 2722542 - G 85 -9.9 -4.34402 | TGGGTCAGAGCAAAA GTATGGC TGCC GCCATAC ACACGCACCCCCCCG Rcas_2120 2724054 - 2723332 - | GntR family transcriptional regulator Rcas_2121 2725043 - 2726044 + | response regulator receiver/SARP domain-containing protein Rcas_2122 2726262 - 2726963 + | hypothetical protein Rcas_2123 2727034 - 2727315 + | hypothetical protein TERM 2023 2731861 - 2731848 - g 79 -8.1 -4.36914 | overlap 2731850 CTGTCCGCCACAAAA CGTCG CTGC CGACG ACCATTCTGCGATGA Rcas_2124 2727349 - 2732088 + | cell divisionFtsK/SpoIIIE Rcas_2125 2732085 - 2732933 + | FHA domain-containing protein TERM 2024 2733224 - 2733192 - g 83 -13.3 -3.91897 | opp_overlap 2733208 TCGCCGATGCACAAA CGCCGGTGCAGAGCG TTG CGCTGAGCAACGGCG GCGCATCCTTTATGC TERM 2025 2733412 - 2733422 + G 74 -2.4 -4.84359 | opp_overlap 2733412 GCCAGGCAACATAGA GCAC ATC GGGC TTTTTATCCCCGTCG Rcas_2126 2732930 - 2734156 + | von Willebrand factor, type A Rcas_2127 2734166 - 2735203 + | serine/threonine protein kinase TERM 2026 2735292 - 2735281 - f 70 -3.6 -4.59982 | GCAGAATCAAACAAA GCAC AAGA GCGC GCTTTCTGGCAGTAC TERM 2027 2736589 - 2736572 - g 73 -7 -4.27316 | CGCCTGAATTGAAAA TGCCGA ACGTTA TCGGCA AATCGCGTAGCGATG Rcas_2128 2735434 - 2737509 + | protein serine/threonine phosphatase Rcas_2129 2737629 - 2739041 + | hypothetical protein Rcas_2130 2739152 - 2740018 + | CHAP domain-containing protein TERM 2028 2740231 - 2740273 + F 88 -13.5 -3.59979 | overlap 2740232 2740234 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2029 2740232 - 2740272 + F 84 -17 -2.75844 | overlap 2740231 2740234 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2030 2740234 - 2740269 + F 85 -18.4 -2.65354 | gap 1, overlap 2740232 2740231 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_2131 2740405 - 2741562 + | hypothetical protein Rcas_2132 2741682 - 2742518 + | hypothetical protein TERM 2031 2742631 - 2742679 + F 100 -13.3 -4.90869 | gap 2, overlap 2742638 2742640 GCAATTTGGGAGGAC GCCAGCAGTGGGGTAGGCGCAGG CAATC CCTGCGTCTAC-CC-CTGTTGAC TTTTTGATTCATACT TERM 2032 2742638 - 2742674 + F 90 -14.4 -3.48824 | overlap 2742631 2742640 GGGAGGACGCCAGCA GTGGGGTAGGCGCAGG CAATC CCTGCGTCTACCCCTG TTGACTTTTTGATTC TERM 2033 2742640 - 2742672 + F 100 -21.4 -3.29762 | overlap 2742638 2742631 GAGGACGCCAGCAGT GGGGTAGGCGCAGG CAATC CCTGCGTCTACCCC TGTTGACTTTTTGAT TERM 2034 2743093 - 2743081 - g 74 -4.8 -4.54047 | TTAGCGTATACAAAA TGGG TGTCT CCCA AACGAACACGTAGTT TERM 2035 2743400 - 2743386 - g 82 -3.5 -5.22289 | GATGAAATATAAAAA CAGCG CACTT CACTG GAATTTCTATGTCAT Rcas_2133 2742916 - 2744046 + | hypothetical protein Rcas_2134 2744052 - 2744921 + | D12 class N6 adenine-specific DNA methyltransferase Rcas_2135 2746343 - 2745006 - | carboxyl-terminal protease TERM 2036 2745365 - 2745339 - G 75 -13.7 -3.06302 | ACGACTGTCACGCAA TGCGCCAGCGA CGATC TCGCTGGCGCT GGCGGAACTGCCATT TERM 2037 2746454 - 2746434 - R 83 -16.9 -2.62616 | overlap 2746417 GCAGGTCTGAGATGA GGGCAGGTC TGA GACCTGCCC CGACTAGCCCCGACT Rcas_2136 2747560 - 2746787 - | hypothetical protein Rcas_2137 2748577 - 2747564 - | ribosomal protein L11 methyltransferase Rcas_2138 2749983 - 2748547 - | cysteinyl-tRNA synthetase Rcas_2139 2750768 - 2749989 - | serine O-acetyltransferase TERM 2038 2750591 - 2750569 - G 74 -10.6 -3.73402 | overlap 2750588 ATACCGGTGAGGAAA CGACTGATCT GCG AGATCAGGCG CGGAATAAACGGCAC TERM 2039 2750615 - 2750601 - G 79 -9.2 -4.1552 | overlap 2750588 CAGGCGCGGAATAAA CGGCAC GCC GCGCCG CCAGAGGGCGTGCGC TERM 2040 2750733 - 2750714 - G 79 -8.6 -4.2558 | gap 1 GATCGTTGAGGAAAA TCGCG-CGA ATA TCGTCGCGA ATGACGCAGAGCAGG TERM 2041 2750847 - 2750814 - R 86 -14.7 -3.28712 | gap 1, overlap 2750816 GCGCGTCGTGCAGAA CAGGGGCGTCG-TGCA TAG TGCAACAACGCCCCTA ACGACAGATACAGGT TERM 2042 2750845 - 2750816 - R 82 -15.1 -3.21276 | gap 1, overlap 2750814 GCGTCGTGCAGAACA GGGGCGTCG-TGCA TAG TGCAACAACGCCCC TAACGACAGATACAG Rcas_2140 2751247 - 2750948 - | FmdB family regulatory protein Rcas_2141 2752553 - 2751333 - | hypothetical protein Rcas_2142 2752643 - 2753110 + | hypothetical protein Rcas_2143 2753755 - 2753123 - | hypothetical protein Rcas_2144 2754616 - 2753978 - | peptidase M23B Rcas_2145 2755584 - 2754592 - | hypothetical protein Rcas_2146 2756108 - 2755581 - | hypothetical protein Rcas_2147 2757169 - 2756240 - | initiation factor 2B related TERM 2043 2756837 - 2756881 + g 82 -14.3 -3.27298 | gap 1, opp_overlap 2756836 2756839 GATGCCGTCGGAAAT CAGCGCCAGCGCGC-CTTCG GCGACA TGGAGCGCGTGCTGGCGCAG TTGATGCTTAAACGC Rcas_2148 2759774 - 2757315 - | multi-sensor hybrid histidine kinase Rcas_2149 2759985 - 2761223 + | 2-alkenal reductase Rcas_2151 2762695 - 2761604 - | hypothetical protein TERM 2044 2762819 - 2762779 - H 72 -12.7 -3.02038 | gap 2, opp_overlap 2762771 2762786, overlap 2762772 AAGGAATAGGATAGA GGTCGTAGTGGTGGCGCGT TTCAG ACGCGCCACCACT-CT-CC TGAGTCCGTGTTCAT TERM 2045 2762786 - 2762814 + H 100 -21.1 -2.81133 | opp_overlap 2762779 2762772, overlap 2762771 AGGATAGAGGTCGTA GTGGTGGCGCGTT TCA GACGCGCCACCAC TCTCCTGAGTCCGTG TERM 2046 2763973 - 2763944 - g 74 -9.9 -3.79481 | gap 1, overlap 2763933 GAAACTCAAGGTAAA GGCGG-GTCCTGCC CGT GGCGGGAAGCCGCC TTACACCGATGCCGG Rcas_2152 2762850 - 2764391 + | hypothetical protein TERM 2047 2764374 - 2764407 + T 76 -6 -4.63218 | TACACATATTTCAAC CCGCTGACTGCA TCGTAAGGTC TGGAGTCGGCGG TTTTCTTGCCAGGAC TERM 2048 2764603 - 2764618 + T 74 -11.8 -3.53012 | GGGTCAGCTCCCCTG CCCCCC ATAT GGGGGG TTTAAGGGCGGACCG Rcas_2153 2765782 - 2764760 - | anthranilate phosphoribosyltransferase Rcas_2154 2767196 - 2765769 - | hypothetical protein TERM 2049 2765847 - 2765820 - G 91 -15.5 -3.96148 | opp_overlap 2765814, overlap 2765836 GGGTTCGACCAGAAA CGTCGGCGGCG CAGAAC CGCCGCCGGCG GAAACGTTCAGTTTT Rcas_2155 2767765 - 2767199 - | glutamine amidotransferase of anthranilate synthase TERM 2050 2767474 - 2767512 + g 78 -14.7 -3.09516 | gap 2 TGCCGTGCATCGCCT TTGGCGCGCGCACGACGGC GCC GCCGTA-TGC-CGCGCCAA TTGCCTGATGCCCCA TERM 2051 2767778 - 2767820 + r 76 -9.9 -3.81287 | gap 2, overlap 2767789 CATAGGTCGCCCTCC GCTGCGTCAATGGCGCGCAGC AGC GCTGC-CGCC-TTGTTGCAAC TTTCCTCATACTCTG Rcas_2156 2769315 - 2767762 - | anthranilate synthase component I TERM 2052 2767789 - 2767810 + g 75 -12.3 -3.66772 | gap 1, overlap 2767778 CTCCGCTGCGTCAAT GGCGCGCAGC AGC GCTGC-CGCC TTGTTGCAACTTTCC TERM 2053 2768189 - 2768158 - G 81 -11.6 -3.87815 | TTCTACCTCCATAAA TGCCGGAACCCGAA CCGT TCCCGGTTCCGACA CGCGCCCCAGGTCGT TERM 2054 2768212 - 2768244 + g 72 -2.5 -4.8048 | overlap 2768214 CAGGTCGTTGCGCCC CAGATCGACGAGCAT CAG GTGCTCGGCGCGCTC TTTTTCGTCTGCCAG TERM 2055 2770285 - 2770327 + r 100 -19.3 -3.59979 | AGTGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2157 2771723 - 2770716 - | tryptophanyl-tRNA synthetase TERM 2056 2772847 - 2772880 + G 83 -7.4 -4.56597 | gap 1 GGCAAGCCTGCGCCG CGCCACTGGATCGAC GACAA GACGATCTGG-GGCG TTTTTCACGGCGACA Rcas_2158 2771944 - 2773869 + | hypothetical protein TERM 2057 2774059 - 2774038 - T 71 -6.5 -4.2828 | opp_overlap 2774038, overlap 2774039 CTGCACGGATGAAAA GGGATCGCC CCGT GGCAATCCG TTCCATGCGCGCCGA Rcas_2159 2775445 - 2774087 - | tryptophan synthase subunit beta TERM 2058 2774589 - 2774605 + g 74 -5.8 -4.44046 | opp_overlap 2774583, overlap 2774590 GCCACCACACGCACA TTGCGC TCGCC GCGCAG TTTCTTTCCGATGAA TERM 2059 2775572 - 2775545 - R 100 -17.8 -5.63103 | overlap 2775571 CGCGAATCAAAAAAA CCTCTCGTCCCC TGCC AGGGACGAGAGG CTGAAGAACCTCACG Rcas_2160 2776685 - 2776440 - | hypothetical protein Rcas_2161 2777219 - 2776698 - | FHA domain-containing protein Rcas_2162 2778613 - 2777336 - | von Willebrand factor type A Rcas_2163 2779778 - 2778765 - | protein serine/threonine phosphatase TERM 2060 2778828 - 2778856 + g 70 -10.1 -3.64703 | opp_overlap 2778835, overlap 2778830 GCGATTAGCAGCATC GACCAGAGCGCGC ACG GCGCGCTGCGGGC TTTCGATCCCCCGCA Rcas_2164 2781770 - 2779812 - | serine/threonine protein kinase TERM 2061 2780888 - 2780912 + g 72 -4.3 -4.56597 | CGGCTGATGCCCAGC GTGTTTTCATA TCG TAGGAAAGCGC TTTTTCGACGACCGC Rcas_2165 2782173 - 2782808 + | hypothetical protein Rcas_2166 2783976 - 2782816 - | radical SAM domain-containing protein Rcas_2167 2784568 - 2784194 - | hypothetical protein TERM 2062 2784826 - 2784809 - H 82 -9.1 -4.4267 | opp_overlap 2784809 CCTGAAAATGGAAAA GACGCCC TGAC AGGCGTC TTCTATTCGGATGGT Rcas_2168 2785088 - 2786113 + | transcriptional regulator-like protein TERM 2063 2786158 - 2786128 - T 93 -15.4 -3.54543 | opp_overlap 2786129, overlap 2786129 AGGGATGCCGCCAAA GCCTCCCGCAGGGT TCA AACCTGCGGGAGGT TTTTTTATGCCCGGC TERM 2064 2786129 - 2786157 + T 100 -18.9 -5.60993 | opp_overlap 2786129 2786128 GGGATGCCGCCAAAG CCTCCCGCAGGGT TCA AACCTGCGGGAGG TTTTTTTATGCCCGG TERM 2065 2786157 - 2786129 - T 88 -18.9 -2.72511 | opp_overlap 2786129, overlap 2786128 GGGATGCCGCCAAAG CCTCCCGCAGGGT TCA AACCTGCGGGAGG TTTTTTTATGCCCGG Rcas_2169 2788628 - 2786163 - | ATP-dependent protease La TERM 2066 2787086 - 2787098 + g 73 -3.3 -4.7254 | overlap 2787085 GTATCAGATGCCGCT GCGCA ATG TGCAC TTTTTCGTCCCCGGT Rcas_2170 2790788 - 2788758 - | Amylo-alpha-16-glucosidase Rcas_2171 2791605 - 2791078 - | LysR family transcriptional regulator Rcas_2172 2791744 - 2793441 + | cyclic nucleotide-binding protein Rcas_2173 2793460 - 2796510 + | nitrate reductase TERM 2067 2796776 - 2796760 - g 75 -13.7 -3.04263 | opp_overlap 2796760 ACCTGATGCTGAATA CCGCTGC TGC GCAGCGG TTTGCTCAACTCTGC TERM 2068 2796760 - 2796776 + G 84 -13.7 -3.75665 | opp_overlap 2796760 ACCTGATGCTGAATA CCGCTGC TGC GCAGCGG TTTGCTCAACTCTGC TERM 2069 2797232 - 2797253 + G 70 -11.6 -3.18264 | CGTGCGTTCCCTGAT CATCCCGG ATGTCG CCGGGATG TTCATCAGTCGCCGC Rcas_2174 2796513 - 2797562 + | uncharacterized component of anaerobic dehydrogenase-like protein Rcas_2176 2799387 - 2798191 - | ABC transporter related Rcas_2175 2797604 - 2798296 + | formylmethanofuran dehydrogenase subunit E region TERM 2070 2798845 - 2798826 - GT 70 -10 -3.47573 | opp_overlap 2798837 TGACGTAGATCACAA TCAGGCGA CGCT CCGCCTGA AGCGCGCGGATCTCG Rcas_2177 2800064 - 2799384 - | molybdate ABC transporter, inner membrane subunit Rcas_2178 2800867 - 2800061 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 2071 2800639 - 2800610 - G 70 -7.9 -4.07687 | gap 1, opp_overlap 2800614 ATTTGCCGCGTAAAA CAGGTCGAACG-GA GCG CCGCGTTCGATCTG CTGGGCAAGTTGGCC Rcas_2179 2801776 - 2801216 - | PadR-like family transcriptional regulator Rcas_2180 2803163 - 2801850 - | hypothetical protein TERM 2072 2803280 - 2803313 + r 79 -12.6 -3.54951 | gap 1, overlap 2803283 CAGTCATCTTGCACC GATGCATCGGCATCG GCGGG TGATGCCGATGC-TC TTATGTGATCGACTC TERM 2073 2803283 - 2803311 + r 89 -15.4 -3.34902 | overlap 2803280 TCATCTTGCACCGAT GCATCGGCATCG GCGGG TGATGCCGATGC TCTTATGTGATCGAC TERM 2074 2803505 - 2803494 - R 71 -5.8 -4.41616 | overlap 2803496 ACTTCGGTAAAGAAA GGGT CGTC ACCC GACGTCGCCCGTCAG Rcas_2181 2804174 - 2803500 - | polar amino acid ABC transporter, inner membrane subunit Rcas_2182 2804928 - 2804191 - | ABC transporter related Rcas_2183 2805613 - 2804960 - | polar amino acid ABC transporter, inner membrane subunit Rcas_2184 2806505 - 2805618 - | extracellular solute-binding protein Rcas_2186 2808965 - 2807631 - | hypothetical protein TERM 2075 2808689 - 2808660 - G 75 -14.3 -2.79501 | GAGACCCTTATCAGA CGCCATGCGGATG ATCG CATCCACGTGGCG GAAGTAGAACTCGTT Rcas_2187 2810570 - 2809167 - | peptidase M20 TERM 2076 2810070 - 2810056 - G 73 -7.1 -4.37886 | opp_overlap 2810040 TCAGTGCGGACAAAA CGTCG TAGTC CGACG CTGGATGTTTCTTCT Rcas_2188 2813125 - 2810582 - | thiamine pyrophosphate protein central region TERM 2077 2811168 - 2811198 + g 71 -8.3 -3.86346 | gap 1, overlap 2811169 ATCGGTCGCGCGGGA TCGCGCGCTGCC AGATCGGC GGCAGCG-GCGG TTTCTGCGCGCATAG TERM 2078 2811599 - 2811579 - G 71 -6 -4.36914 | GTCGTTTCGACAAAA CGGCGTAG TTCCT CCTCGCCG CGCGCCCACCAGACG Rcas_2189 2814384 - 2813143 - | ATPase Rcas_2190 2815874 - 2814450 - | pyridoxal-dependent decarboxylase TERM 2079 2815534 - 2815555 + g 76 -8.6 -4.18018 | overlap 2815535 ACGTGTGGTCGGTGT GCGCGCGC CCAATC GCGCGCGG TTTTCACTGCCAGGA Rcas_2191 2817208 - 2815871 - | Na+/melibiose symporter and related transporter-like protein TERM 2080 2816082 - 2816056 - G 72 -4.2 -4.58466 | overlap 2816058 CCGATAACGACAAAA CGGCGGCGAAGA GCA CCCCCTGCGCCG AAAACGCCAGTTTGG Rcas_2192 2817923 - 2817246 - | TetR family transcriptional regulator TERM 2081 2818191 - 2818224 + H 100 -18.9 -4.68593 | TCTTCCCCTCCTTCG CCAGGAGGCCCCGGT TCCT GCCGGGGCTTTCTGG TTTTTCGATCCTGAA TERM 2082 2819193 - 2819142 - g 74 -15 -2.52635 | gap 1, overlap 2819119 2819141 AGGCGGAGCAGCAAC GCGCGGAAGCGGAACGGCAGCGCGC CGA GCGC-CTGGCGGCGCGCCTGCGCGC CCTGGGCATCGACCC Rcas_2193 2818490 - 2819224 + | hypothetical protein Rcas_2194 2819246 - 2820022 + | hypothetical protein Rcas_2195 2820044 - 2820736 + | hypothetical protein Rcas_2196 2820758 - 2821411 + | hypothetical protein TERM 2083 2821493 - 2821529 + T 100 -20.9 -5.42975 | opp_overlap 2821493 CTGTAATACTGCAAA CGCCGCAGAGACGTTGC GAC GCAACCTCCCTGCGGCG TTTTTCTTTGTCTCC TERM 2084 2821529 - 2821493 - T 100 -23.1 -3.66803 | opp_overlap 2821493 CTGTAATACTGCAAA CGCCGCAGAGACGTTGC GAC GCAACCTCCCTGCGGCG TTTTTCTTTGTCTCC Rcas_2197 2837163 - 2821552 - | hypothetical protein TERM 2085 2824530 - 2824552 + g 71 -11.2 -3.45023 | opp_overlap 2824545 CGCCGATGCCGTTCT CGCCGGTGTC GAA GACGCCGTCG TTGTCGTCGTCCTCG TERM 2086 2825214 - 2825236 + g 79 -11.2 -3.85864 | CGCCGATGCCGTTCT CGCCGGTGTC GAA GACGCCGTCG TTGTTGTCGTCCTCG TERM 2087 2832866 - 2832839 - G 72 -2.6 -4.74132 | opp_overlap 2832850 2832858, overlap 2832840 ACATCCCACGAAAAA TCGGCGCG GTTGTTGCGCTG CGCGCCGC TCTGGTTGGCGACGG TERM 2088 2837223 - 2837205 - R 74 -3.1 -4.73635 | CAGAACGTAACAAAA TGGGATC GGGAT GATCGCA GAATCGCCAATATGG TERM 2089 2837311 - 2837329 + r 78 -4.4 -4.8048 | overlap 2837312 2837314 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2090 2837416 - 2837434 + r 78 -4.4 -4.8048 | overlap 2837417 2837419 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2091 2837644 - 2837662 + r 78 -4.4 -4.8048 | overlap 2837645 2837647 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2092 2837749 - 2837767 + r 89 -4.4 -5.18726 | overlap 2837750 2837752 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCTTGTGCGCA TERM 2093 2837752 - 2837764 + r 70 -10.5 -3.42342 | overlap 2837750 2837749 GCTCAGGACGTGGAA GCCCC TGG GGGGC TGGTTTTTCTTGTGC TERM 2094 2837854 - 2837872 + r 78 -4.4 -4.8048 | overlap 2837855 2837857 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2095 2838000 - 2838018 + r 78 -4.4 -4.8048 | overlap 2838001 2838003 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2096 2838105 - 2838123 + r 78 -4.4 -4.8048 | overlap 2838106 2838108 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2097 2838169 - 2838187 + r 78 -4.4 -4.8048 | opp_overlap 2838151, overlap 2838170 2838172 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2098 2838274 - 2838292 + r 78 -4.4 -4.8048 | opp_overlap 2838256, overlap 2838275 2838277 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2099 2838379 - 2838397 + r 78 -4.4 -4.8048 | overlap 2838380 2838382 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2100 2838526 - 2838543 + r 74 -3.3 -4.81551 | gap 1, overlap 2838527 2838528 TGGCTCAGGACGTGG AC-GCCCC TGG GGGGCTGG TTTTTCCTGTGCGTG TERM 2101 2838631 - 2838648 + r 74 -3.3 -4.8048 | gap 1, overlap 2838632 2838633 TGGCTCAGGACGTGG AC-GCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2102 2838794 - 2838812 + r 78 -4.4 -4.8048 | overlap 2838795 2838797 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2103 2838899 - 2838917 + r 78 -4.4 -4.8048 | overlap 2838900 2838902 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2104 2839045 - 2839063 + r 78 -4.4 -4.8048 | overlap 2839046 2839048 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2105 2839150 - 2839168 + r 78 -4.4 -4.8048 | overlap 2839151 2839153 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2106 2839255 - 2839273 + r 78 -4.4 -4.8048 | overlap 2839256 2839258 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTATGCGCG TERM 2107 2839360 - 2839378 + r 78 -4.4 -4.8048 | opp_overlap 2839342, overlap 2839361 2839363 GTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2108 2839468 - 2839480 + r 76 -10.5 -3.83026 | opp_overlap 2839448 GCTCAGGACGTGGAA GCCCC TGG GGGGC TTTCCTGTGCGCGCG TERM 2109 2839568 - 2839580 + r 76 -10.5 -3.83026 | opp_overlap 2839548 GCTCAGGACGTGGAA GCCCC TGG GGGGC TTTCCTGTGCGCGCG TERM 2110 2839668 - 2839680 + r 76 -10.5 -3.83026 | opp_overlap 2839648 GCTCAGGACGTGGAA GCCCC TGG GGGGC TTTCCTGTGCGCGCG TERM 2111 2839768 - 2839780 + r 76 -10.5 -3.83026 | opp_overlap 2839748 GCTCAGGACGTGGAA GCCCC TGG GGGGC TTTCCTGTGCGCGCG TERM 2112 2839865 - 2839883 + r 78 -4.4 -4.8048 | overlap 2839866 2839868 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2113 2840011 - 2840029 + r 78 -4.4 -4.8048 | overlap 2840012 2840014 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG TERM 2114 2840116 - 2840134 + r 78 -4.4 -4.8048 | overlap 2840117 2840119 CTGGCTCAGGACGTG GAAGCCCC TGG GGGGCTGG TTTTTCCTGTGCGCG Rcas_2198 2841044 - 2840286 - | dienelactone hydrolase Rcas_2200 2842773 - 2841907 - | xylose isomerase domain-containing protein Rcas_2199 2841246 - 2841989 + | YhhN family protein Rcas_2201 2843546 - 2842770 - | xylose isomerase domain-containing protein Rcas_2202 2844645 - 2843575 - | oxidoreductase domain-containing protein TERM 2115 2843655 - 2843667 + g 70 -10.5 -3.62597 | CCAGCGCGACCGACA GCGCG CGG CGCGC TTCTTCACCGGTGAC Rcas_2203 2845769 - 2844642 - | oxidoreductase domain-containing protein TERM 2116 2845418 - 2845463 + g 72 -4.5 -4.56597 | gap 1, overlap 2845401 2845420 2845448 GTCCGGCGCGGTCTG CGGC-GGCGATCATTGCATCCG CTT CGGAGACGCTGACCGCCAGCGG TTTTTCGACCAGCAC Rcas_2204 2848037 - 2845959 - | NAD synthetase TERM 2117 2846203 - 2846163 - G 71 -14.1 -2.57162 | gap 1, overlap 2846155 2846154 2846187 AAAAACCTCAAGCCA GCGCCGGATCGTCGCCAG ATCATA CTGGCGACGAT-CATCGC CGGGCAATCCGGGGG TERM 2118 2848073 - 2848087 + r 71 -7.2 -4.16842 | opp_overlap 2848073 ATTGCCACCAATTTA GTGTTA GTA TAACAC TTTCTTGCCGGTCAG Rcas_2205 2848425 - 2848099 - | hypothetical protein TERM 2119 2848498 - 2848455 - R 73 -10.3 -3.59979 | gap 1, opp_overlap 2848459 TTCGCTTAGGGTAAA CGCAGCGCGGAATCTGAGCG GGTCG CGCT-AGACCCCTCGCTTCG CTCGGGGTGACAATT TERM 2120 2848671 - 2848628 - R 73 -10.3 -3.59979 | gap 1, opp_overlap 2848632 TTCGCTCAGGGTAAA CGCAGCGCGGAATCTGAGCG GGTCG CGCT-AGACCCCTCGCTTCG CTCGGGGTGACAATT TERM 2121 2848844 - 2848801 - R 73 -10.3 -3.59979 | gap 1, opp_overlap 2848805 TTCGCTCAGGGTAAA CGCAGCGCGGAATCTGAGCG GGTCG CGCT-AGACCCCTCGCTTCG CTCGGGGTGACAATT Rcas_2206 2849431 - 2848949 - | hypothetical protein Rcas_2207 2849491 - 2850420 + | pseudouridine synthase Rcas_2208 2851786 - 2850458 - | Serine-type D-Ala-D-Ala carboxypeptidase Rcas_2209 2853955 - 2852690 - | glycosyl transferase group 1 TERM 2122 2854086 - 2854054 - R 79 -14.9 -2.87132 | opp_overlap 2854060 2854085, overlap 2854058 CGTTCCTGCCAGACA TCAAGAGGGACGCGA TTG CCGCATCCCTCTTGC GCCTCCGTGCGCTCT TERM 2123 2854082 - 2854058 - R 86 -14.3 -3.32022 | opp_overlap 2854060, overlap 2854054 CCTGCCAGACATCAA GAGGGACGCGA TTG CCGCATCCCTC TTGCGCCTCCGTGCG Rcas_2210 2855313 - 2854927 - | death-on-curing family protein Rcas_2211 2855510 - 2855313 - | hypothetical protein Rcas_2212 2857375 - 2856395 - | alcohol dehydrogenase TERM 2124 2856603 - 2856584 - G 72 -12.2 -3.3164 | AAGCCAGTGCGACAA CCACCATC CACG GATGGTGG CGCTGCGGAACAGCA TERM 2125 2858154 - 2858166 + H 76 -10.5 -3.81027 | GCATTGGCATCAGCA GCCCC AGC GGGGC TTTCACTTGCTTCAG TERM 2126 2858584 - 2858598 + G 74 -9.2 -3.90002 | overlap 2858582 2858585 CGCTCTTCCATTTTT TCCCCG GTA CGGGGG TCTTTTCCTTTGGTA TERM 2127 2858864 - 2858878 + G 76 -7 -4.41616 | overlap 2858859 GGGGTACATTTCGCC GCAGGC GCG GCCCGC TTTCTTTGCGCACAT Rcas_2213 2858349 - 2859452 + | radical SAM domain-containing protein TERM 2128 2859463 - 2859482 + T 72 -13.6 -2.53213 | opp_overlap 2859473, overlap 2859473 CGTGACCCGTTGTGC CCGCAACG GAGC CGTTGCGG TGGGTTGAGCCGTTG Rcas_2214 2861113 - 2859929 - | DNA replication and repair protein RecF TERM 2129 2860130 - 2860112 - G 70 -12.4 -3.21218 | opp_overlap 2860118 2860125 2860127 2860129 ATCGTCGAGGAGCAA CACCGGCG CGT CACCGGTG CGTATTCGCATCAGT TERM 2130 2860125 - 2860144 + g 74 -5.6 -4.4078 | opp_overlap 2860112, overlap 2860118 2860127 2860129 AACACCGGCGCGTCA CCGGTGCG TATT CGCATCAG TTTTGCTTCGCCGAG Rcas_2215 2862177 - 2861140 - | isopentenyl pyrophosphate isomerase Rcas_2216 2862709 - 2863473 + | peptidylprolyl isomerase TERM 2131 2863686 - 2863729 + T 77 -11 -3.59979 | gap 1, opp_overlap 2863690, overlap 2863688 2863690 CGTTGTCACCCCGAT CAGAGCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2132 2863690 - 2863725 + T 76 -14.8 -2.65354 | gap 1, opp_overlap 2863690, overlap 2863688 2863686 GTCACCCCGATCAGA GCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGC TGCGTTTACCCTGAG TERM 2133 2863859 - 2863902 + T 77 -11.6 -3.59979 | gap 1, opp_overlap 2863863 CGTTGTCACCCCGAG CGAAGCGAGGGGGCTGGCGCG ACC CGCTCC-GATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2217 2866003 - 2863973 - | hypothetical protein Rcas_2218 2866671 - 2866024 - | hypothetical protein Rcas_2219 2869655 - 2866668 - | FHA domain-containing protein TERM 2134 2868047 - 2868019 - G 77 -15.9 -2.62933 | CAATCGGGCAGATCA CCGGCGGGTGGCG TGA CGCCACCGGCAGG CGGCACAGGCGCGGA Rcas_2220 2870384 - 2869713 - | hypothetical protein Rcas_2221 2871314 - 2870550 - | hypothetical protein Rcas_2222 2871632 - 2871390 - | hypothetical protein TERM 2135 2871551 - 2871575 + g 72 -12.1 -3.34192 | opp_overlap 2871551 2871549, overlap 2871552 GGATGTCGAGCAATA TGCGGGCTGGT GTC GCCAGTCCGCG TTGGTTAAGAGCATT TERM 2136 2871552 - 2871574 + g 71 -13.4 -2.60194 | opp_overlap 2871551 2871549, overlap 2871551 GATGTCGAGCAATAT GCGGGCTGGT GTC GCCAGTCCGC GTTGGTTAAGAGCAT Rcas_2223 2872102 - 2871629 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 2137 2871848 - 2871828 - G 86 -8.1 -4.57569 | opp_overlap 2871837, overlap 2871830 GCAGCGTCGGAAAAA CTGGGGCGG CGC CCGCGCCGG GTATCGGCGTAGAGC Rcas_2224 2872527 - 2872099 - | thioesterase superfamily protein Rcas_2225 2873064 - 2872558 - | hypothetical protein Rcas_2226 2875601 - 2873088 - | putative uncharacterized restriction enzyme Rcas_2227 2876252 - 2875929 - | excinuclease ABC subunit C TERM 2138 2876591 - 2876544 - R 74 -11.4 -3.53091 | gap 1, opp_overlap 2876579, overlap 2876517 2876547 2876574 2876575 2876579 ACCGCTCCCTCGAAA TGACCAGCGATCGCTACCACTCC CGC GAAATGACAGCGATCGCTAG-CG CTCCTTCGAAATGAC TERM 2139 2876589 - 2876547 - R 86 -18.6 -2.90496 | opp_overlap 2876579, overlap 2876517 2876544 2876574 2876575 2876579 GCTCCCTCGAAATGA CCAGCGATCGCTACCACTCC CGC GAAATGACAGCGATCGCTAG CGCTCCTTCGAAATG TERM 2140 2876680 - 2876633 - R 100 -19.4 -3.53091 | gap 1, overlap 2876606 2876636 2876663 ACCGCTCCCGCGAAA TGACCAGCGATCGCTACCACTCC CGC GAAATGACAGCGATCGCTGG-CA TTCCCGCCAAATGAC TERM 2141 2876678 - 2876636 - R 100 -22.2 -2.90496 | overlap 2876606 2876633 2876663 GCTCCCGCGAAATGA CCAGCGATCGCTACCACTCC CGC GAAATGACAGCGATCGCTGG CATTCCCGCCAAATG Rcas_2228 2878390 - 2876810 - | site-specific DNA-methyltransferase (adenine-specific) Rcas_2229 2879030 - 2878365 - | type III restriction system methylase TERM 2142 2878607 - 2878574 - G 72 -2.3 -4.73105 | gap 1, overlap 2878575 ACTCAGAAAAAATAA TCGGCTGCGGCGGGTC CGT GACCGTCTGCAA-CGA AAGCGCGTCGCCATG Rcas_2230 2879306 - 2879043 - | hypothetical protein Rcas_2231 2880424 - 2879315 - | DNA methylase N-4/N-6 domain-containing protein TERM 2143 2879662 - 2879681 + g 72 -7.2 -4.10657 | gap 1, overlap 2879664 CGTCAAACATCTCTG GCTGCATTG CGT CAATGC-GC TTTTGCGCAATCTGG TERM 2144 2880459 - 2880474 + r 83 -2.6 -5.24129 | gap 1, overlap 2880461 ACGTATGAGGCGATC CA-GTTC TCA GAACGTG TTTTTTATACAAAGA Rcas_2232 2881158 - 2880538 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Rcas_2233 2881765 - 2881205 - | GCN5-related N-acetyltransferase Rcas_2234 2882752 - 2881829 - | peptidase M23B TERM 2145 2882394 - 2882416 + g 78 -3.5 -5.02502 | opp_overlap 2882390 GCAATTATAGATCTG CCAAAAG CAAAGTAAT CTTTTGG TTTTTCTGTACTATC Rcas_2235 2883402 - 2882941 - | hypothetical protein TERM 2146 2883363 - 2883345 - G 74 -5.3 -4.64676 | gap 1, overlap 2883360 CCAGCGCGAAGAAAA CTGCTAGC CCAA GC-AGCAG CATCAGCGCCTGTCC Rcas_2236 2884492 - 2883548 - | DNA adenine methylase Rcas_2237 2885271 - 2884591 - | restriction endonuclease EcoRV Rcas_2238 2885981 - 2885625 - | hypothetical protein Rcas_2239 2886047 - 2888383 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 2147 2888810 - 2888762 - g 84 -8.6 -4.41047 | overlap 2888763 2888764 ACTGGCGAAGGAAAA GGCTGCGATGGAAGAGCAGGCG AAGAG CGCCAGCGCTGCCGTCGCAGAA CTGGCTGGCAGCAAA TERM 2148 2888809 - 2888763 - g 70 -12.1 -3.24146 | overlap 2888762 2888764 CTGGCGAAGGAAAAG GCTGCGATGGAAGAGCAGGCG AAGAG CGCCAGCGCTGCCGTCGCAGA ACTGGCTGGCAGCAA TERM 2149 2888808 - 2888764 - g 76 -15.6 -2.54166 | overlap 2888763 2888762 TGGCGAAGGAAAAGG CTGCGATGGAAGAGCAGGCG AAGAG CGCCAGCGCTGCCGTCGCAG AACTGGCTGGCAGCA Rcas_2240 2888448 - 2889062 + | SH3 type 3 domain-containing protein TERM 2150 2889631 - 2889659 + G 78 -12.3 -3.72893 | TACGGTGCGGCGCGC CGCTGGCGGCGCC GCT GGCGTTGCCGTCG TTTGATCGCCGCCTG Rcas_2241 2889069 - 2890274 + | chromate transporter Rcas_2242 2890287 - 2892539 + | heavy metal translocating P-type ATPase TERM 2151 2893060 - 2893083 + G 71 -8.1 -3.90922 | TACGATACCGCAGGC GTTCGCACC ACCGCC GGTGCGACC TTCTTTGCCGAGCGT Rcas_2243 2892799 - 2894190 + | amidase Rcas_2244 2894194 - 2895075 + | hypothetical protein Rcas_2245 2895908 - 2895570 - | hypothetical protein TERM 2152 2896808 - 2896824 + G 72 -4.5 -4.56597 | CGCAGGCGGGCAGAT TATTATC CGT GATAGTA TTTTTGCCGGGAACA Rcas_2246 2896113 - 2897888 + | hypothetical protein TERM 2153 2898201 - 2898231 + F 100 -14.1 -4.44667 | gap 1, overlap 2898202 AATGGGCAGGTCATG TCACCCCGGTTCTC GGAA GAGA-CCGGGGTGG TTTGTTGTTGGGCAG TERM 2154 2898202 - 2898230 + F 85 -15.4 -3.26318 | gap 1, overlap 2898201 ATGGGCAGGTCATGT CACCCCGGTTCTC GGAA GAGA-CCGGGGTG GTTTGTTGTTGGGCA Rcas_2247 2898314 - 2898526 + | hypothetical protein Rcas_2248 2898648 - 2899952 + | periplasmic binding protein Rcas_2249 2899967 - 2900305 + | ferredoxin-like protein TERM 2155 2900327 - 2900305 - f 75 -14.1 -2.87881 | overlap 2900293 2900307 TAACGGTCGCACATA GAGGCGCCC CCTGT GGGCGCCCC GATGGGACGATAACG TERM 2156 2900325 - 2900307 - f 72 -13.1 -2.98942 | overlap 2900305 2900293 ACGGTCGCACATAGA GGCGCCC CCTGT GGGCGCC CCGATGGGACGATAA TERM 2157 2900878 - 2900896 + G 74 -14.6 -2.62157 | opp_overlap 2900880, overlap 2900877 2900880 2900894 GGCGCAGCGGGTACA GAGCAGCG TCA CGCTGCTC ATTCTGGGGTTGATG Rcas_2250 2900342 - 2901466 + | transport system permease protein Rcas_2251 2901463 - 2902491 + | ABC transporter related Rcas_2252 2902643 - 2903218 + | hypothetical protein Rcas_2253 2903805 - 2905361 + | adenylate cyclase Rcas_2254 2905400 - 2906620 + | PSP1 domain-containing protein Rcas_2255 2906638 - 2907687 + | oxidoreductase domain-containing protein Rcas_2256 2907691 - 2908563 + | hypothetical protein Rcas_2257 2908560 - 2909375 + | maf protein Rcas_2258 2909354 - 2910118 + | two component LuxR family transcriptional regulator Rcas_2259 2910111 - 2911205 + | diacylglycerol kinase catalytic region TERM 2158 2911293 - 2911315 + G 74 -11.9 -3.53091 | CGCCAACCTCTGTGG CGCCGGCGC CGGTC GCGCCGCCG TTTGCACCACCCGGT TERM 2159 2911987 - 2912006 + G 72 -4.2 -4.62069 | GGCGTTTGCCGGGCG TGATGGTG ACCG CACCGACA TTTTTGCGATACCGA Rcas_2260 2911208 - 2912254 + | WD40 domain-containing protein TERM 2160 2912558 - 2912607 + G 100 -17.9 -3.62046 | gap 1, overlap 2912541 2912559 CCGGCGCCGCGCCGC TGCTTCGTCGCCTGG-CACTGTGG ACG CCACAGTGGCCCGGTGTCGAGGCG TTCTTCGCGCAGTAC TERM 2161 2912559 - 2912606 + G 87 -19.2 -2.77013 | gap 1, overlap 2912541 2912558 CGGCGCCGCGCCGCT GCTTCGTCGCCTGG-CACTGTGG ACG CCACAGTGGCCCGGTGTCGAGGC GTTCTTCGCGCAGTA Rcas_2261 2912254 - 2913546 + | glycosyl transferase group 1 TERM 2162 2913654 - 2913609 - f 77 -12 -3.59979 | gap 3, overlap 2913610 2913613 TTCGCTCAGGGTAAA CGCAG--CGCGGAATC-TGCACG GGT CGCGCACGACCCCGCGCGCTGCG CGGGGTACCATGCCG TERM 2163 2913650 - 2913610 - f 77 -14.8 -2.75844 | overlap 2913609 2913613 TCGCTCAGGGTAAAC GCAGCGCGGAATC-TGCACG GGT CGCGCACGACCCCGCGC-GC TGCGCGGGGTACCAT TERM 2164 2913648 - 2913613 - f 78 -16.2 -2.65354 | gap 1, overlap 2913610 2913609 CTCAGGGTAAACGCA GCGCGGAATC-TGCACG GGT CGCGCACGACCCCGCGC GCTGCGCGGGGTACC Rcas_2262 2913976 - 2914578 + | hypothetical protein Rcas_2263 2914950 - 2915231 + | membrane protein-like protein Rcas_2264 2915250 - 2917418 + | Na+/solute symporter Rcas_2265 2917624 - 2918826 + | sodium/hydrogen exchanger TERM 2165 2919348 - 2919390 + T 100 -20.7 -3.59979 | ATGGTCACCCCGCGC CGC-GCGCGGGGTCGTGCGCG ACC CGCGCA-GATTCCGCGCTGCG TTTACCCTGAGCGAA Rcas_2266 2920628 - 2919456 - | hypothetical protein Rcas_2267 2920906 - 2920643 - | hypothetical protein Rcas_2268 2921166 - 2920903 - | hypothetical protein Rcas_2269 2924032 - 2921420 - | helicase TERM 2166 2923078 - 2923053 - G 100 -14.7 -4.1466 | overlap 2923044 2923066 ATCGAACCGGGAAAA CCGGCGCAGAC GAGC ACCTGCGCCGG TTGCAGGTCGGAACC TERM 2167 2923390 - 2923361 - G 78 -6.3 -4.64598 | gap 1, overlap 2923352 CAATGACGCCAAAAA GCCGGGCGCAGCGC CAT GCGCCGC-CGCAAC GCGATAGGCGCGCAT Rcas_2270 2925037 - 2924204 - | hypothetical protein Rcas_2271 2925800 - 2925105 - | FHA domain-containing protein TERM 2168 2925572 - 2925608 + g 77 -13.6 -3.34398 | gap 1, opp_overlap 2925594, overlap 2925570 GCGTTGCAGCAGTTT CCGGC-GCGGCGTCTAC GACA GACGGCGCCGCTGCCGG TGTTTCGGCAGCGGG TERM 2169 2926227 - 2926173 - R 100 -17.8 -3.54424 | opp_overlap 2926189 2926194, overlap 2926224 GCTGAGCGGGCGAAA GCCCTCGCTCAGGACGTGGAAGCCCC GCA GGGGCTTTCATGATCTCAGCAAGGGC TTCAGCCCGCAGCGC TERM 2170 2926189 - 2926211 + r 72 -14.2 -2.62184 | opp_overlap 2926173, overlap 2926194 CCCTCGCTCAGGACG TGGAAGCCCC GCA GGGGCTTTCA TGATCTCAGCAAGGG TERM 2171 2926194 - 2926206 + r 76 -10.5 -3.81951 | opp_overlap 2926173, overlap 2926189 GCTCAGGACGTGGAA GCCCC GCA GGGGC TTTCATGATCTCAGC TERM 2172 2926384 - 2926348 - R 100 -12.2 -5.24129 | overlap 2926351 TTGTTCCATAAAAAA GAACCCCGATCGTGCC GATAG GGCGCGATCGGGGGTG AAGGACGCGATGTTG TERM 2173 2926381 - 2926351 - R 100 -18.3 -4.72201 | overlap 2926348 TTCCATAAAAAAGAA CCCCGATCGTGCC GATAG GGCGCGATCGGGG GTGAAGGACGCGATG Rcas_2272 2927188 - 2926403 - | hypothetical protein Rcas_2273 2927665 - 2927291 - | hypothetical protein TERM 2174 2927817 - 2927828 + H 78 -2.2 -5.10767 | CGCATGCCTTGCTGT TGGA GTCT TCCG TTTTTGTCTTGAATA TERM 2175 2928594 - 2928606 + G 70 -10.5 -3.64703 | CGGCAGTGCGACCCC CGGCG ACG CGCCG TTTGCCTGCAACAAC Rcas_2274 2927860 - 2931207 + | protease domain-containing protein TERM 2176 2931233 - 2931262 + T 93 -15.8 -3.48276 | opp_overlap 2931230 2931227, overlap 2931258 GGCAGCAAAGCAGCG CCCTCCCGTAGA CTGACA TCTGCGGGAGGG TTCTATGGGAGGGGC Rcas_2275 2932649 - 2931960 - | hypothetical protein TERM 2177 2932796 - 2932808 + r 70 -4.7 -4.4715 | opp_overlap 2932795 CGAAGGCGCACGAAG GGGCG CGT CACCC TTTTCTCCCTTCACC TERM 2178 2932951 - 2932963 + r 70 -4.7 -4.4715 | opp_overlap 2932950 CGAAGGCGCACGAAG GGGCG CGT CACCC TTTTCTCCCTTCACC TERM 2179 2933105 - 2933117 + r 70 -4.7 -4.4715 | opp_overlap 2933094 2933105 2933104 CGAAGACGCACGAAG GGGCG CGT CACCC TTTTCTCCCTTCACC Rcas_2276 2934475 - 2933225 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rcas_2277 2934626 - 2937370 + | peptidase C11 clostripain TERM 2180 2937396 - 2937428 + TF 100 -23.5 -3.35679 | TGGTCTTATACTTCT GCCCCTCTCTCCGGC ATC GCCGGAAAGAGGGGC TTCTGACTCGAGGCG TERM 2181 2939098 - 2939129 + GT 82 -11.4 -3.86015 | overlap 2939099 CTGTGAATGACGCAT CGTTGCCGGCGCCG ACAC TGGCGCCGGCGCCC TTTGTGCCAACGGTG TERM 2182 2939099 - 2939128 + GT 79 -14.9 -2.91395 | overlap 2939098 TGTGAATGACGCATC GTTGCCGGCGCCG ACAC TGGCGCCGGCGCC CTTTGTGCCAACGGT Rcas_2279 2940777 - 2940049 - | hypothetical protein Rcas_2278 2937843 - 2940101 + | serine/threonine protein kinase Rcas_2280 2940933 - 2941832 + | glyoxalase/bleomycin resistance protein/dioxygenase Rcas_2281 2943570 - 2942014 - | glycine dehydrogenase subunit 2 Rcas_2282 2944991 - 2944074 - | hypothetical protein Rcas_2283 2946547 - 2945210 - | glycine dehydrogenase (decarboxylating) Rcas_2284 2947179 - 2946790 - | glycine cleavage system H protein Rcas_2285 2948333 - 2947221 - | glycine cleavage system T protein TERM 2183 2948392 - 2948361 - R 100 -12.4 -5.63517 | gap 1, opp_overlap 2948366 TCGTCAAATAAAAAA GACAG-GGTCAGACA TCG CGCCTGACCTCTGTC CACTGACCTGTGAGA Rcas_2286 2949409 - 2948618 - | response regulator receiver protein Rcas_2287 2952338 - 2949372 - | HEAT repeat-containing PBS lyase TERM 2184 2950384 - 2950371 - GH 75 -3.7 -4.72986 | opp_overlap 2950372, overlap 2950372 2950373 CAGCCGCATGAAAAA TGGCG CCGA CGCCT TTGCATCGTGGCGCA Rcas_2288 2952581 - 2954896 + | serine/threonine protein kinase TERM 2185 2954939 - 2954911 - f 72 -14 -2.52623 | gap 1, opp_overlap 2954909 2954907, overlap 2954910 2954908 GGCGCTTGACAACAT GGCTGC-GGATCA CGGT TGATCCCGCAGCC GATCCCTTTCCCTAT Rcas_2289 2954953 - 2956095 + | glycosyl transferase group 1 TERM 2186 2956460 - 2956441 - g 75 -12.1 -3.62046 | overlap 2956454 CCACGGCGCCAACAA CGGCGCC GACAGA GGCGCCG CCGACAGCAGTGCCG TERM 2187 2956486 - 2956454 - g 77 -14.7 -2.87463 | overlap 2956441 AACGGCGCCGACAGA GGCGCCGCCGACAGC AGT GCCGACCACGGCGCC GACTGATACGCCGCC Rcas_2290 2956290 - 2957477 + | PT repeat-containing protein Rcas_2291 2958251 - 2957634 - | recombination protein RecR TERM 2188 2958320 - 2958262 - R 70 -13.1 -2.84602 | opp_overlap 2958266 2958294, overlap 2958261 TGCATGCCAGCAAAC TGTTGGGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCGTTCG GTTGGCAGGTCTGAG TERM 2189 2958266 - 2958316 + r 100 -21.3 -3.17392 | opp_overlap 2958261 2958262, overlap 2958294 TGCCAGCAAACTGTT GGGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCG TTCGGTTGGCAGGTC TERM 2190 2958294 - 2958344 + r 90 -17.7 -3.17392 | opp_overlap 2958262, overlap 2958266 2958322 GACCTGCCCGTTCGG TTGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCG TTCGGTTGGCAGGTC TERM 2191 2958322 - 2958372 + r 90 -17.7 -3.17392 | overlap 2958294 2958350 GACCTGCCCGTTCGG TTGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCG TTCGGTTGGCAGGTC TERM 2192 2958350 - 2958400 + r 90 -17.7 -3.17392 | overlap 2958322 2958378 GACCTGCCCGTTCGG TTGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCG TTCGGTTGGCAGGTC TERM 2193 2958378 - 2958428 + r 90 -17.7 -3.17392 | overlap 2958350 2958407 2958408 GACCTGCCCGTTCGG TTGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCCG TTCGGTTGGCAGGTC TERM 2194 2958407 - 2958455 + r 100 -19 -3.57144 | overlap 2958378 2958408 ACCTGCCCGTTCGGT TGGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCCC TTTCAGAATCCCGGC TERM 2195 2958408 - 2958454 + r 100 -22.5 -2.74144 | overlap 2958378 2958407 CCTGCCCGTTCGGTT GGCAGGTCTGAGACCTGCC CGTTCGGTT GGCAGGTCTGAGACCTGCC CTTTCAGAATCCCGG Rcas_2292 2958760 - 2958458 - | hypothetical protein Rcas_2293 2960710 - 2958776 - | DNA polymerase III, subunits gamma and tau TERM 2196 2959334 - 2959360 + g 82 -14.4 -3.38812 | overlap 2959331 GACGGGAGATGCTGC CGCTGTGCCGGT TGC ACCCGCACGGCG TATTGTTGGAACAGG Rcas_2294 2961806 - 2960847 - | hypothetical protein TERM 2197 2961059 - 2961086 + g 74 -10.4 -3.6849 | CCTGCGCTTCGGCCT CGCGCGCTACGG CTTC TCGCTGCGCGCG TTCTTCGGCTTCAGT Rcas_2295 2962197 - 2963141 + | hypothetical protein TERM 2198 2963159 - 2963122 - T 90 -19.3 -3.05384 | gap 1, overlap 2963071 2963070 2963073 2963126 2963129 CGCCGCCGGAGGGAA TGAAGGA-GGGGCAGGTC TGA GACCTGCCCCATCCATCA ACCGTGGGGGCAGGT TERM 2199 2963155 - 2963126 - T 95 -18.7 -3.37344 | gap 1, overlap 2963073 2963122 2963129 GCCGGAGGGAATGAA GGA-GGGGCAGGTC TGA GACCTGCCCCATCC ATCAACCGTGGGGGC TERM 2200 2963187 - 2963129 - T 88 -19.7 -2.8507 | gap 1, overlap 2963073 2963126 2963122 2963161 2963162 GGAGGGAATGAAGGA GGGGCAGGTCTGAGACCTGCCCCATC CATCAACC GTGGGGGCAGGTCTGAGACCTG-CCC CATCCATCAACCGTG TERM 2201 2963240 - 2963262 + T 83 -16.2 -3.07935 | opp_overlap 2963236 2963235 CATCCATCAACCGTG GGGGCGGGGC TGT GACCCGCCCC TTCCATCCATGCCAT TERM 2202 2963288 - 2963321 + T 100 -13.1 -4.62069 | gap 1, opp_overlap 2963288, overlap 2963288 GCCATCCATCAACAA CC-GTGGGGGCGGGTC TCA GAGCCGCCCCAACAGG TTTTTGACATACGCC TERM 2203 2963320 - 2963288 - T 95 -15.5 -3.73647 | opp_overlap 2963288 2963288 GCCATCCATCAACAA CCGTGGGGGCGGGTC TCA GAGCCGCCCCAACAG GTTTTTGACATACGC TERM 2204 2963288 - 2963320 + T 81 -13.3 -3.3692 | opp_overlap 2963288, overlap 2963288 GCCATCCATCAACAA CCGTGGGGGCGGGTC TCA GAGCCGCCCCAACAG GTTTTTGACATACGC Rcas_2296 2964157 - 2963303 - | xylose isomerase domain-containing protein Rcas_2297 2965111 - 2964179 - | hypothetical protein TERM 2205 2964687 - 2964703 + g 76 -6.5 -4.40561 | overlap 2964689 GGAAAGATGAAATCT TCGCTGC CCA GCAGCCA TTGTTTTTCCCAGGG TERM 2206 2965203 - 2965145 - R 86 -13.3 -3.4268 | gap 2, opp_overlap 2965146, overlap 2965143 2965146 TTACAACCCTAAATA TGCACTGCGCACAGCGTCATCATCGCGCA GTT CGCGCGATGATC-CGCTGCGCACAATCC- GTCCATTTTCGATCA TERM 2207 2965203 - 2965146 - R 88 -19.3 -2.65126 | gap 1, opp_overlap 2965146, overlap 2965143 2965145 TACAACCCTAAATAT GCACTGCGCACAGCGTCATCATCGCGCA GTT CGCGCGATGATC-CGCTGCGCACAATCC GTCCATTTTCGATCA Rcas_2298 2965834 - 2965130 - | ABC transporter related Rcas_2299 2966549 - 2965821 - | ABC transporter related Rcas_2300 2967604 - 2966843 - | cyclase family protein Rcas_2301 2968587 - 2967601 - | inner-membrane translocator TERM 2208 2967720 - 2967738 + g 74 -10.2 -3.7511 | overlap 2967719 CGCCGAACACGATCC GCGCCGTT TGC GGCGGCGC TTGTGTTGTCAGAAC TERM 2209 2968631 - 2968616 - R 71 -6.8 -4.1552 | overlap 2968617 TACCGCTGCAACAAA CCCTGC GGGC GCAGGA GCAGCAACACAATCA Rcas_2302 2969469 - 2968600 - | inner-membrane translocator Rcas_2303 2970774 - 2969476 - | extracellular ligand-binding receptor Rcas_2304 2971488 - 2970814 - | GntR family transcriptional regulator TERM 2210 2971292 - 2971276 - G 70 -7.9 -3.96624 | GAGTTCGACGACAAA CACGCCG CGC CGGGGTG AAATCTGCACCAACC TERM 2211 2971911 - 2971899 - g 70 -10.5 -3.65199 | overlap 2971900 AACGCGCCATCGAAA CGGCG CAC CGCCG CTTCGCCGAATGGCG TERM 2212 2972283 - 2972305 + G 76 -10.6 -3.88291 | overlap 2972279 TCAAGCCTGCCTCGA CTTCGCCG ATTATTG CGGCGAAG TTTATGGAGATCATG Rcas_2305 2971655 - 2973205 + | putative delta-1-pyrroline-5-carboxylate dehydrogenase Rcas_2306 2973974 - 2975470 + | carboxypeptidase Taq Rcas_2307 2975561 - 2976274 + | rare lipoprotein A TERM 2213 2976432 - 2976473 + F 100 -12.3 -4.52589 | gap 1, opp_overlap 2976443 2976445 CGGCCTGTGGTTTGG GGGTGATCGAAGACCGCCAC GTT GGGGCGACCTTC-ATCACCC TTTTGTATCGGCACG Rcas_2308 2976530 - 2978377 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Rcas_2309 2978672 - 2979718 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 2214 2979764 - 2979732 - f 90 -19.1 -3.03007 | opp_overlap 2979721 AATATTTGTGTAAGA GCGGAGGAGCGGGTC TCA GACCCGCGCCTCCGG GCGTCACAACATATT Rcas_2310 2979827 - 2980192 + | ArsR family transcriptional regulator TERM 2215 2980658 - 2980686 + GF 74 -12.3 -3.14132 | TGGCAGTTGATGCGG CGCATCGCGGGCG TGG CGTCGGCGAGGCG TTGGTGCGCGCAGCC Rcas_2311 2980459 - 2980953 + | GCN5-related N-acetyltransferase Rcas_2312 2980904 - 2981734 + | methyltransferase type 11 Rcas_2313 2983137 - 2981839 - | major facilitator transporter TERM 2216 2982173 - 2982137 - G 74 -14.3 -2.50994 | overlap 2982136 CCGAACGCGATCAAT CCGGCGACGACGACCAG TGC CGGATCGACGCCGCCAG CGAGCGCCACTGCGA TERM 2217 2982735 - 2982755 + g 74 -2.6 -4.87273 | gap 1, overlap 2982738 CGGCGACAATCAGTT TGA-CAGCG CTCT TGCTGCTCA TTTTTGTCAGGTCTT Rcas_2314 2984195 - 2983185 - | glyceraldehyde-3-phosphate dehydrogenase, type I Rcas_2315 2985001 - 2984225 - | ArsR family transcriptional regulator TERM 2218 2984673 - 2984656 - G 71 -8.3 -3.93742 | opp_overlap 2984624 2984666 2984667 2984669 2984671 TGCAGAGAAACAGAA CGCGCGC TTTG GGGCGCG GAGCGCTCTCCTCTT Rcas_2316 2985786 - 2985019 - | ArsR family transcriptional regulator TERM 2219 2985861 - 2985844 - R 74 -5.7 -4.57837 | opp_overlap 2985843 2985844 2985846 AGAGGCTTCTAAAAA TATCAAT AGGA ATTGATA CTTTGTGAGTGATAC TERM 2220 2985914 - 2985956 + r 90 -14.9 -3.59979 | overlap 2985915 2985917 ATTGTTACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2221 2985915 - 2985955 + r 86 -18.4 -2.75844 | overlap 2985914 2985917 TTGTTACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2222 2985917 - 2985952 + r 88 -19.8 -2.65354 | gap 1, overlap 2985915 2985914 GTTACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_2317 2988759 - 2986741 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 2223 2988514 - 2988528 + g 73 -12.8 -3.14881 | TGCCAGACCGCTGTG GCGCGC CGC GCGCGC TTCGTCAACCAATTG Rcas_2318 2989398 - 2988883 - | hypothetical protein Rcas_2319 2990473 - 2989535 - | UV damage repair endonuclease-like protein Rcas_2320 2990594 - 2992117 + | glutamyl-tRNA synthetase Rcas_2321 2992665 - 2992108 - | FHA domain-containing protein TERM 2224 2993113 - 2993137 + G 71 -11.3 -3.53091 | AGGTGCATCGGGCGC CACGGCGCTGC GCG GCATCGCCGGG TTTGGCGCCGGGCAT Rcas_2322 2992991 - 2994235 + | hypothetical protein Rcas_2323 2995309 - 2994260 - | polyprenyl synthetase Rcas_2324 2996209 - 2995568 - | phosphoglycerate mutase TERM 2225 2996979 - 2996991 + G 76 -5.5 -4.66537 | CGCGACAGCAGGCTG CCGGT GAG ATCGG TTTTCTCTTCGAGCG Rcas_2325 2996345 - 2997277 + | TPR repeat-containing protein Rcas_2326 2999758 - 2997320 - | peptidase C1A papain TERM 2226 2999805 - 2999816 + H 71 -7.2 -4.18164 | GATGATGTGTCTGGC GGCG GTCA CGCC TTCTTTTCAAGAATT TERM 2227 3000779 - 3000807 + G 71 -8.8 -3.94634 | opp_overlap 3000779 AATTACCAGAGCGAA TTGGGTTGCCCG GGCGA CTGGCAGCCCGA TTGTTTGCGCTCCTG TERM 2228 3000959 - 3000931 - g 70 -11.6 -3.11208 | overlap 3000928 TTGGAGCGAAAATTA TGGCGCCGGCGG CGCAC CCGGCGGCGCGA ACATCCCCTTCACCG Rcas_2327 3000323 - 3004528 + | alpha amylase catalytic region TERM 2229 3004584 - 3004598 + T 74 -5.7 -4.56597 | GGGAGAGGGGAGGAC CTCTC AGGTG GAGAG TTTTTCAGGCACGAG Rcas_2328 3005878 - 3005108 - | hypothetical protein Rcas_2329 3006480 - 3005881 - | hypothetical protein TERM 2230 3006724 - 3006709 - g 73 -6.8 -4.2558 | opp_overlap 3006710, overlap 3006710 TAGTGCGCAGCAAAA GCGACC GCAT GATCGC GGGCGTGTGTGGTGG Rcas_2330 3006681 - 3006959 + | phage shock protein C, PspC TERM 2231 3007005 - 3007037 + T 82 -15 -3.15758 | gap 1, opp_overlap 3007014, overlap 3006995 GTAGGCGTCGTGACG CGCGAGAGACGGAGT GCTT GCTCCGTCTCTC-CG TTGCTGCGCCGTTGT Rcas_2331 3008667 - 3007069 - | acyltransferase ws/dgat/mgat family protein Rcas_2332 3008793 - 3009248 + | hypothetical protein Rcas_2333 3009451 - 3010239 + | purine phosphorylase family 1 TERM 2232 3011495 - 3011515 + G 70 -12.5 -2.94126 | overlap 3011484 3011482 ACCATCGATGGCATT GCGCGCATC GCC GAAGCGCGC TGTCTCGATGTGATT TERM 2233 3012311 - 3012301 - g 76 -8.2 -4.18018 | overlap 3012302 CCGCGCTATTGAAAA CGCG CTG CGCG GGCAACCCGACATGA Rcas_2334 3010976 - 3012634 + | cobalamin B12-binding domain-containing protein Rcas_2335 3012659 - 3013765 + | NAD/NADP octopine/nopaline dehydrogenase TERM 2234 3014753 - 3014793 + F 90 -14.6 -3.58343 | gap 1, opp_overlap 3014732, overlap 3014754 CCCGGCACGGGGATG TCCGCGCGCGCGGCGCCGG TCTC CCTGCTCC-CGCGTGCGGG TTTGGGGATCATCGG TERM 2235 3014754 - 3014792 + F 79 -15.9 -2.74792 | gap 1, opp_overlap 3014732, overlap 3014753 CCGGCACGGGGATGT CCGCGCGCGCGGCGCCGG TCTC CCTGCTCC-CGCGTGCGG GTTTGGGGATCATCG TERM 2236 3016097 - 3016125 + G 72 -3.8 -4.62471 | gap 1, overlap 3016119 CCGACCGCATGTTTA TGGCATTCGGCGT CGAA GCGC-GCGTGCCA TTTTTGGACGTTGAG Rcas_2336 3014989 - 3016485 + | asparagine synthetase B Rcas_2337 3016792 - 3017232 + | hypothetical protein TERM 2237 3017288 - 3017233 - T 100 -24.1 -3.51091 | gap 1, opp_overlap 3017237, overlap 3017229 3017223 CACAACCAGAACTAA GTAAGGGCGGGACTGAGTCCTGC-CC TCCCG GGTGCGGGTCTCAGTCCCGCCCTTGC ATCATAGCGCTACAC TERM 2238 3017237 - 3017284 + T 100 -26.4 -3.09635 | gap 1, opp_overlap 3017229 3017223 3017233 ACCAGAACTAAGTAA GGGCGGGACTGAGTCCTGC-CCT CCC GGGTGCGGGTCTCAGTCCCGCCC TTGCATCATAGCGCT Rcas_2338 3017845 - 3017318 - | Ferritin Dps family protein Rcas_2339 3018286 - 3017945 - | hypothetical protein TERM 2239 3018808 - 3018779 - R 100 -16.5 -4.44667 | GCCCTTAACAACAAA CAGGGGCGAGATC GGAT GATCCCACCCCTG CCCTGGATCGTTGAG Rcas_2340 3019615 - 3018836 - | cell wall anchor domain-containing protein Rcas_2341 3020916 - 3019879 - | glycosyl transferase group 1 TERM 2240 3020766 - 3020747 - G 73 -12.8 -3.14463 | AATCCCCGCCACCAA CCACGCGG CAAC CCGCGCGG GATCAGTATAGGCAG Rcas_2342 3022137 - 3020926 - | GCN5-related N-acetyltransferase TERM 2241 3021013 - 3020967 - G 76 -7.8 -4.29738 | overlap 3020968 CGAGACCGACGAAAA GCCGTTCAACGAGCGCCAACGC CGG GCGTGAGCGCGCGTCGATCAAT CCAAATGCCGCTGCC TERM 2242 3022266 - 3022320 + r 74 -12 -3.53224 | opp_overlap 3022288 GCGCTGCGGGCTGTA GCCGTGGCTGAGCGCGTGCAAACCCC TGC GGGGCTTCCACGTCCTGAGCGAGGGC TTTAGCCCGCAGCTC Rcas_2343 3023483 - 3022380 - | methyltransferase type 11 TERM 2243 3024557 - 3024568 + G 80 -5.8 -4.76041 | CAGTTCGCGCTGACC TGCC CGGA GGCA TTTTTCATCGCTATG Rcas_2344 3023825 - 3024859 + | GCN5-related N-acetyltransferase TERM 2244 3025027 - 3025072 + F 72 -13.9 -2.6252 | gap 1, opp_overlap 3025027 3025028, overlap 3025024 3025019 3025044 ACTTTGGCGTTATAA CG-TGGGCATCCCGTCCGCAAC GGG GGCGCGGGCGGGATGCCCGTCA TCCGTTCTGATCTGC TERM 2245 3025072 - 3025027 - f 81 -13.9 -3.28791 | gap 1, opp_overlap 3025024 3025019 3025027 3025044, overlap 3025028 ACTTTGGCGTTATAA CG-TGGGCATCCCGTCCGCAAC GGG GGCGCGGGCGGGATGCCCGTCA TCCGTTCTGATCTGC TERM 2246 3025070 - 3025028 - f 78 -15.4 -2.57132 | opp_overlap 3025027 3025024 3025019 3025044, overlap 3025027 CTTTGGCGTTATAAC GTGGGCATCCCGTCCGCAAC GGG GGCGCGGGCGGGATGCCCGT CATCCGTTCTGATCT TERM 2247 3025632 - 3025593 - g 93 -20.1 -3.01712 | CGCCGCTGCCGAACA GCGCGCCGCTGCCGCC-GA AGCC TCTGGCGAC-GCGGCGCGC GCCGCAGCCCTGCGC TERM 2248 3025865 - 3025841 - g 71 -9.1 -3.76492 | overlap 3025842 CTGAACTCGATCAAA CCGGCGACGCG GCG CGCGCCGCAGC CCTGCGCGAACGCAT TERM 2249 3025864 - 3025842 - g 70 -12.6 -2.85574 | overlap 3025841 TGAACTCGATCAAAC CGGCGACGCG GCG CGCGCCGCAG CCCTGCGCGAACGCA TERM 2250 3026332 - 3026295 - g 70 -7.6 -3.96842 | gap 1, overlap 3026298 ACTCGAACAGAACAA CGAGCCGCAACGCGCCG GACGG CTGCGCGTTGCG-CATG CCCGTATGCAGGCGG TERM 2251 3026630 - 3026659 + G 84 -16.4 -2.98823 | GCGGCGAACCCGCGT TGCGCGCGCCGG AGTCGG CAGGCGCGCGCA TCTATATCAACGCGG TERM 2252 3028148 - 3028182 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2253 3028295 - 3028329 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2254 3028442 - 3028476 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2255 3028883 - 3028917 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2256 3029030 - 3029064 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2257 3029177 - 3029211 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2258 3029324 - 3029358 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2259 3029471 - 3029505 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2260 3029618 - 3029652 + G 95 -17.9 -3.48276 | gap 1 GCGCCGCGCGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC TERM 2261 3029938 - 3029895 - g 71 -13 -3.01712 | gap 1, opp_overlap 3029912 GCTGGCGGGGGAAGA CCGCGCCGCACGGCTGCGCGC AGC GCTCGCCGCC-TACGACGAGG CGCTGCGCTTCTCTA TERM 2262 3029912 - 3029946 + G 95 -17.9 -3.48276 | gap 1, opp_overlap 3029895 GCGCCGCACGGCTGC GCGCAGCG-CTCGCCG CCTA CGACGAGGCGCTGCGC TTCTCTACCCCCGCC Rcas_2345 3025402 - 3031011 + | TPR repeat-containing protein Rcas_2346 3031468 - 3031076 - | HEPN domain-containing protein Rcas_2347 3031802 - 3031452 - | DNA polymerase beta subunit TERM 2263 3031992 - 3031973 - g 71 -5.6 -4.36914 | opp_overlap 3031991, overlap 3031974 3031977 TGCGCGCGCAGAAAA TCAGGGCG CCGA CGCCACGA CGCCGCTGGCGCAAG Rcas_2348 3031884 - 3032648 + | hypothetical protein Rcas_2349 3033190 - 3033450 + | hypothetical protein Rcas_2350 3033443 - 3033937 + | hypothetical protein Rcas_2351 3034409 - 3034170 - | hypothetical protein TERM 2264 3034686 - 3034721 + H 84 -11.8 -4.0802 | opp_overlap 3034685 3034706 ACAATGTGAGCAACC GGGCCGTGGGCGAC AGGTAAGC GACGTCCACGGCTC TTTGATTCTTGCAAT TERM 2265 3034739 - 3034769 + H 95 -11.1 -4.56597 | gap 1, opp_overlap 3034706 3034739 TGATTCTTGCAATCA GGCCGCGGGCGTCC CGAT GGAA-CCCGCGGTC TTTTTGCGCCCGCGC Rcas_2352 3034888 - 3035088 + | hypothetical protein Rcas_2353 3035121 - 3036050 + | ABC transporter related Rcas_2354 3036070 - 3036972 + | ribosome small subunit-dependent GTPase A TERM 2266 3037086 - 3037041 - f 73 -9.8 -3.59979 | gap 3, overlap 3037042 3037045 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGGCCACGCC TERM 2267 3037085 - 3037042 - f 73 -13.3 -2.75844 | gap 3, overlap 3037041 3037045 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGGCCACGC TERM 2268 3037080 - 3037045 - f 72 -14 -2.65354 | gap 1, overlap 3037042 3037041 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGGC Rcas_2355 3037144 - 3037746 + | GCN5-related N-acetyltransferase TERM 2269 3037961 - 3037972 + G 78 -3 -5.02323 | overlap 3037956 TTGCGCCGGAGCAGG TGAA TACC TTCA TTTTGTTTCTGCTCG TERM 2270 3038172 - 3038187 + G 77 -2.4 -5.05782 | overlap 3038151 CACTGCAATCATCCT GGCAGT CGTG GCAGCC TTTTTTCGCATCGAT Rcas_2356 3037750 - 3038610 + | ABC-2 type transporter Rcas_2357 3039417 - 3040775 + | hypothetical protein Rcas_2358 3043939 - 3042809 - | ABC-2 type transporter Rcas_2359 3045187 - 3043952 - | beta-lactamase Rcas_2360 3046490 - 3045255 - | PAS domain-containing protein TERM 2271 3045743 - 3045725 - G 77 -13.1 -3.5525 | opp_overlap 3045715 ACATATCGGCCGAAA GCGCCGG TTCCT CCGGCGC AGTGCGGTACAGCGC TERM 2272 3046424 - 3046451 + g 75 -13.4 -3.08812 | gap 1, overlap 3046435 CAAAAGCTTTCGCAC CCCCGGCGCCAGC CCC GCTG-CGGCGGGG CTTTGTTCGCCAAGC TERM 2273 3046435 - 3046452 + g 93 -14.1 -4.15044 | overlap 3046424 GCACCCCCGGCGCCA GCCCCGC TGCG GCGGGGC TTTGTTCGCCAAGCG Rcas_2362 3047442 - 3049628 + | dehydrogenase-like protein Rcas_2363 3049633 - 3050049 + | cytochrome c class I Rcas_2364 3051210 - 3050152 - | alpha/beta hydrolase fold Rcas_2365 3051983 - 3051213 - | cobyrinic acid ac-diamide synthase TERM 2274 3051631 - 3051653 + g 71 -11.2 -3.53012 | opp_overlap 3051625 AGAATGTAATCGTAA GCGTCGCGCG TGG TGCGCAACGC TTTGCGCAGCAGCAA Rcas_2366 3052678 - 3052067 - | flavoprotein oxygenase DIM6/NTAB family-like protein TERM 2275 3052574 - 3052544 - G 74 -5.3 -4.56736 | gap 1 ATTGAAGAACGAAAA CGGCGCCAGATTGA TCGA CCCGTC-GGCGCCG ATGGTCGATGCCCAG TERM 2276 3052777 - 3052757 - H 76 -13.3 -3.05463 | overlap 3052759 ATGTCTGTTATGGAA GAGCAGGTC TGA GACCTGCCC CTAGCTGTGCTACAA TERM 2277 3052775 - 3052759 - H 72 -12.3 -3.08679 | overlap 3052757 GTCTGTTATGGAAGA GCAGGTC TGA GACCTGC CCCTAGCTGTGCTAC Rcas_2367 3052834 - 3053814 + | hypothetical protein TERM 2278 3054127 - 3054117 - g 71 -8.2 -3.83026 | opp_overlap 3054123 CTGGCGGACATCAAA GCCG ACC CGGC GTTCGCCGACTTTGC Rcas_2368 3053811 - 3054239 + | hypothetical protein Rcas_2369 3055929 - 3054394 - | hypothetical protein Rcas_2370 3056127 - 3057278 + | oligogalacturonide lyase Rcas_2371 3059119 - 3057305 - | sulphate transporter TERM 2279 3057767 - 3057755 - G 100 -9.1 -5.0133 | overlap 3057757 CACGCTGCCAAAAAA GACCG GAC CGGTC AGGTAGTAGACATGA TERM 2280 3058730 - 3058715 - G 74 -10.4 -3.71378 | GATTCCAGACGTAAA GCCGGT AATG ACCGGC GATGGAATGAACGAA TERM 2281 3059094 - 3059069 - G 71 -4.7 -4.42386 | gap 1, overlap 3059070 3059071 GTCGTAGGTAGAAAA CTCCCGTTGCAG AAT CTGAAACAGG-G ATAGTCGTTTCAACA TERM 2282 3059199 - 3059161 - R 83 -15.5 -2.98813 | gap 1, opp_overlap 3059166, overlap 3059166 ACTCGATAAGAACGA CAAAAGGCTC-CTTCCGC CCTT GCGGAAACGAGCCTTTCG GTATGCCTGCGAGGT TERM 2283 3059194 - 3059166 - R 95 -11.8 -4.6265 | gap 1, opp_overlap 3059166, overlap 3059161 ATAAGAACGACAAAA GGCTC-CTTCCGC CCTT GCGGAAACGAGCC TTTCGGTATGCCTGC TERM 2284 3059166 - 3059194 + r 71 -9.6 -3.71873 | gap 1, opp_overlap 3059161 3059166 ATAAGAACGACAAAA GGCTCCT-TCCGC CCTT GCGGAAACGAGCC TTTCGGTATGCCTGC Rcas_2372 3059683 - 3059333 - | ArsR family transcriptional regulator Rcas_2373 3061215 - 3059941 - | putative PAS/PAC sensor protein TERM 2285 3061351 - 3061324 - R 82 -9.2 -4.31433 | opp_overlap 3061331 TAGTTCGATAACAAA TGCATAACCGTT TCTC AACGGTTTCGCA ATATACCGGGTGATT Rcas_2374 3061874 - 3061383 - | hypothetical protein Rcas_2375 3062372 - 3061893 - | hypothetical protein TERM 2286 3062425 - 3062449 + G 75 -3.5 -4.92828 | ATAATCGAAATGGTC TGGACGGTCTA TGA TAATTCGTCCA TTTCTTTTTGCCTTT Rcas_2376 3062419 - 3063447 + | AraC family transcriptional regulator TERM 2287 3063962 - 3063994 + G 71 -12.8 -3.05384 | overlap 3063964 GCGACGACGATTCAG GAGTGGCTGGATAC CGCCT GTATCCAGCCGGTC TTCACTGCGCACCCA TERM 2288 3064036 - 3064016 - g 73 -12.5 -3.19192 | GCGCACCCAACCGAA GCGCGCCGT CGC ACGGCGCTC GAGAAAGTGCGTCGG TERM 2289 3064488 - 3064526 + G 71 -11.1 -3.4582 | gap 2, overlap 3064486 GACAGGCGCCGGTCA GCGACGAGT--TGCGCGAG TCG CTCGCGCATGATGCGTCGC TCTTTCCTGAAGTCG TERM 2290 3065097 - 3065123 + G 78 -12.2 -3.78934 | overlap 3065118 TTGTCAGTATGACGC GCGGTGCAAGCG ACC TGCTGGCGCCGC TTCTTCTGGCAAAGG TERM 2291 3066038 - 3066019 - g 72 -12.2 -3.37796 | opp_overlap 3066012 CGTCATGATCGACAA TGCCCAGA TGAT TCTGGGCA AAGCCGATCTTCACA Rcas_2377 3063554 - 3066370 + | phosphoenolpyruvate carboxylase Rcas_2378 3067011 - 3066379 - | hypothetical protein TERM 2292 3068352 - 3068339 - g 71 -8.1 -3.84648 | opp_overlap 3068338, overlap 3068351 CTCAAGATCACCAAA CCTGG CAAG CCAGG GCTTCGTCTCGATGA TERM 2293 3069014 - 3069032 + G 85 -5.8 -5.06414 | GTGTATGATCACACT CCCGCGCC CAC GGAGCCGG TTTTTGTTGCGGACC TERM 2294 3069277 - 3069261 - g 71 -13.7 -2.56164 | overlap 3069260 CGTCCAACGAGCAAC CGGCGCA ACC TGCGCCG CCGGTCGAGCAACCT Rcas_2379 3067343 - 3069370 + | VanW family protein Rcas_2380 3069965 - 3069420 - | hypothetical protein TERM 2295 3070540 - 3070526 - g 81 -10 -4.21194 | GGTGATCAGGCAAAA CGTGTC GCC GACACG CTGGCACGGCAGGTG Rcas_2381 3070217 - 3070684 + | hypothetical protein Rcas_2382 3070697 - 3071365 + | deoxyribonuclease V TERM 2296 3071430 - 3071448 + F 79 -8.8 -4.27316 | CGGTGGCTTCGCAGA CGGGCTGT GTG ACGGCTCG TTTTGCCTTCAGCAG Rcas_2383 3071713 - 3072366 + | hypothetical protein Rcas_2384 3072445 - 3072876 + | hypothetical protein Rcas_2385 3073764 - 3073093 - | hypothetical protein Rcas_2386 3075209 - 3073770 - | acyltransferase ws/dgat/mgat family protein Rcas_2387 3075360 - 3075734 + | hypothetical protein Rcas_2388 3077223 - 3076177 - | NMT1/THI5-like domain-containing protein Rcas_2389 3078050 - 3077223 - | binding-protein-dependent transport systems inner membrane component TERM 2297 3078186 - 3078165 - R 100 -15.9 -5.28942 | opp_overlap 3078163 3078162 CATGCGAAACAAAAA CCCGAAGCC ATAC GGCTTCGGG GCATTATTGCAGCGA Rcas_2390 3079562 - 3078516 - | ROK family protein TERM 2298 3078623 - 3078613 - G 76 -8.2 -4.1711 | ACGATGGTCAAGAAA CCGC GTT GCGG CGCCCAGAGATAGGT TERM 2299 3078862 - 3078849 - G 73 -8.1 -4.05788 | CCCGCGCAAACGAAA TGCGC GCTC GCGCA TGCTGAGCGTCGAGG TERM 2300 3079734 - 3079745 + G 70 -7.2 -4.08394 | GACGCTACAGTCATG CCGC GATC GCGG TTTTGCCCGACGTGT TERM 2301 3079762 - 3079789 + G 81 -12 -3.85698 | gap 1 TTTGCCCGACGTGTG GGCAAGCGTTGCC GCA GGCGGCGC-TGCC TTTCTCCGCAGCGCC Rcas_2391 3079731 - 3080999 + | protein serine/threonine phosphatase TERM 2302 3081681 - 3081714 + G 73 -13.2 -3.14931 | opp_overlap 3081676, overlap 3081672 TGAGATCGAAGCATT CGTTATTGGGCGCG ATCTGG CGCGCCTGATGACG TTGCTGCACGATCAG Rcas_2392 3081040 - 3082833 + | protein serine/threonine phosphatase Rcas_2393 3082835 - 3084208 + | serine/threonine protein kinase TERM 2303 3084969 - 3084995 + G 79 -15.8 -2.87344 | GCCTGCTCCTGCGGT TGGTGCGCGGTG CGA CGCCGCGCGCCG TATATCGCGCCAATC TERM 2304 3085370 - 3085358 - g 74 -9.1 -3.91897 | overlap 3085359 GGCGCCACCCAGAAA CTGCG CGC CGCAG CGACGCGCCTGCTCG Rcas_2394 3084284 - 3085522 + | von Willebrand factor type A Rcas_2395 3085550 - 3087067 + | FHA domain-containing protein TERM 2305 3087216 - 3087235 + T 84 -9.2 -4.56597 | CCTCACCCCCTGCCC CGCTCCTC TCAA GTGGAGCG TTTTTGCGCGACCGC TERM 2306 3087555 - 3087597 + T 100 -20.7 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2397 3089275 - 3088442 - | hypothetical protein TERM 2307 3089288 - 3089304 + r 70 -12.3 -2.85999 | overlap 3089290 CATGTTATGCCTCCT GACCGGT CCG ACCGGTC TGTGCTATCAGGTCC Rcas_2398 3090512 - 3089277 - | hypothetical protein Rcas_2399 3090947 - 3090543 - | hypothetical protein Rcas_2400 3092426 - 3091029 - | hypothetical protein TERM 2308 3092431 - 3092418 - G 72 -3.8 -4.63218 | opp_overlap 3092418, overlap 3092421 CGCTTGTGAACAAAA GCAC AACATA GTGC TGATATAGTACCACA TERM 2309 3092502 - 3092468 - R 70 -12.9 -2.87132 | gap 2, opp_overlap 3092467 3092468 CGGTGTTCGCACACA CCGAGCTGGGGCAGGTC TGA GACCTGCCCC-GA-CGG ATTCTGTTGCGCCAG Rcas_2401 3093765 - 3092677 - | polymorphic outer membrane protein TERM 2310 3093120 - 3093151 + g 76 -13.6 -3.14344 | opp_overlap 3093122, overlap 3093122 TGCCGCTGTTCCAGA GACCGCCGCCGCCG CTAG CGCCGGTGGCGGTG TTGGTGAAGAAGGTC TERM 2311 3093122 - 3093149 + g 86 -16.2 -3.13403 | opp_overlap 3093122, overlap 3093120 CCGCTGTTCCAGAGA CCGCCGCCGCCG CTAG CGCCGGTGGCGG TGTTGGTGAAGAAGG TERM 2312 3093149 - 3093122 - G 74 -14 -2.87132 | opp_overlap 3093122 3093120 CCGCTGTTCCAGAGA CCGCCGCCGCCG CTAG CGCCGGTGGCGG TGTTGGTGAAGAAGG TERM 2313 3093314 - 3093281 - G 78 -10.1 -4.04206 | overlap 3093282 GTACCGCCAGAGAAA TTGGCGATGCCGCCG CCGG CGGCGGCGCTGCCAT TCGCAAAGGTCATGC TERM 2314 3093313 - 3093282 - G 75 -13.6 -3.02202 | overlap 3093281 TACCGCCAGAGAAAT TGGCGATGCCGCCG CCGG CGGCGGCGCTGCCA TTCGCAAAGGTCATG TERM 2315 3096394 - 3096443 + r 74 -12.7 -3.21099 | TACATATCGAGCGCT GCGGTGCGACTGCCCGTAAGCGC CGCT GCGGTCATCGCCAGCCGCACCGC TTCCTCGTCCCAGGG Rcas_2403 3097669 - 3097145 - | ThiJ/PfpI domain-containing protein TERM 2316 3097964 - 3097990 + r 76 -12.2 -3.28791 | ACCCCTCGTTCAGGA CGTGGAAGCCCC AGC GGGGCTTGCCCG TTCTCAGCGAGGGCT TERM 2317 3098095 - 3098121 + r 76 -12.2 -3.28791 | ACCCCTCGTTCAGGA CGTGGAAGCCCC AGC GGGGCTTGCCCG TTCTCAGCGAGGGCT TERM 2318 3098226 - 3098252 + r 76 -12.2 -3.28791 | ACCCCTCGTTCAGGA CGTGGAAGCCCC AGC GGGGCTTGCCCG TTCTCAGCGAGGGCT TERM 2319 3098357 - 3098383 + r 76 -12.2 -3.28791 | ACCCCTCGTTCAGGA CGTGGAAGCCCC AGC GGGGCTTGCCCG TTCTCAGCGAGGGCT Rcas_2404 3098784 - 3098584 - | hypothetical protein TERM 2320 3098714 - 3098727 + g 79 -9.5 -4.24204 | opp_overlap 3098723 ATGGCGACTGCTTCG CGCGC AAAG GCGCG TTTTCGCTCTGGCTG Rcas_2405 3099601 - 3098798 - | 4-oxalocrotonate decarboxylase TERM 2321 3099551 - 3099570 + g 72 -13.6 -2.78596 | CCAGGCGTTATCGAG TCGACGCG CTAT CGCGTCGA TGTCCTCCCCACCTA Rcas_2406 3101037 - 3099583 - | aldehyde dehydrogenase Rcas_2407 3101771 - 3101037 - | hydratase/decarboxylase Rcas_2408 3101967 - 3101755 - | 4-oxalocrotonate tautomerase Rcas_2409 3102525 - 3101980 - | flavin reductase domain-containing protein TERM 2322 3102985 - 3103029 + r 79 -14.4 -2.90496 | opp_overlap 3103001, overlap 3102989 CCGTGTACTCCATCA GGGAGCGCATAGGACACGGA TTGGC TCCGTTTCCTATGCCCTTTC TCGTTTGCGCACCAG TERM 2323 3102989 - 3103025 + r 95 -13.8 -4.13654 | opp_overlap 3103001, overlap 3102985 GTACTCCATCAGGGA GCGCATAGGACACGGA TTGGC TCCGTTTCCTATGCCC TTTCTCGTTTGCGCA Rcas_2410 3104028 - 3103018 - | 4-hydroxy-2-ketovalerate aldolase Rcas_2411 3104942 - 3104025 - | acetaldehyde dehydrogenase TERM 2324 3104691 - 3104702 + g 72 -7.2 -4.17023 | overlap 3104685 3104696 3104699 CAAGAGTTTTGCGTG GCGC ACAT GCGC TTTTGCGCTAGTTGC Rcas_2412 3105700 - 3104924 - | IclR family transcriptional regulator TERM 2325 3105823 - 3105788 - R 72 -13.3 -2.65354 | gap 1, overlap 3105785 3105784 CTCAGGGTAAACGCA GCGAGGAGTCTGAGCG GGTTG CGCAC-GACCCCTCGC GCTGCTCGGAGTGAC TERM 2326 3105948 - 3105913 - R 72 -13.3 -2.65354 | gap 1, overlap 3105910 3105909 CTCAGGGTAAACGCA GCGAGGAGTCTGAGCG GGTTG CGCAC-GACCCCTCGC GCTGCTCGGGGTGAC TERM 2327 3106200 - 3106149 - R 82 -14.4 -3.12668 | gap 1 CACGCTGATATTGAA TCTGCACCGGTCTCCCCTCTCCCGC AGC GCGGGAGAGGGGCAAGGGGTG-AGG GCAAACCGCATCAAT Rcas_2413 3107218 - 3106211 - | catechol 2,3-dioxygenase TERM 2328 3106768 - 3106783 + g 78 -6.8 -4.57341 | gap 1, overlap 3106770 GACGGCGCACCGGCA CG-CCGC GCA GCGGTCG TTTTTGCGGGCGGTT Rcas_2414 3108810 - 3107245 - | 4-hydroxyphenylacetate 3-hydroxylase TERM 2329 3108765 - 3108785 + g 74 -4.6 -4.57837 | opp_overlap 3108760, overlap 3108756 TTTCCAGATACTCCT CGCCGGTG AGGGG TACCGTCG TTTTTGCCACAGTCT Rcas_2415 3109150 - 3108854 - | hypothetical protein Rcas_2416 3109254 - 3109565 + | DNA polymerase beta subunit Rcas_2417 3109546 - 3109920 + | hypothetical protein TERM 2330 3110568 - 3110592 + G 89 -16.5 -3.53444 | GCGACCGCTGCCGAC GATGTGGCGCA CCT TGCGCCGCATC TTTCCGGGACGGTGA Rcas_2418 3109947 - 3111056 + | hypothetical protein Rcas_2419 3112695 - 3111121 - | hypothetical protein TERM 2331 3111673 - 3111687 + g 77 -2.1 -4.96848 | overlap 3111664 ATAGTTCATTGCCTG CTGCA TTGCT TGTAG TTTTTGTGTCCACGA TERM 2332 3112721 - 3112750 + r 95 -11.5 -4.46212 | overlap 3112722 TGCTCCTGTTGTCAA TGGTCCAGACAGA AACG TCTGTCTGGAGCG TTTTGTCATGCGCGG TERM 2333 3112722 - 3112749 + r 76 -12.8 -3.27406 | overlap 3112721 GCTCCTGTTGTCAAT GGTCCAGACAGA AACG TCTGTCTGGAGC GTTTTGTCATGCGCG TERM 2334 3113037 - 3112994 - R 100 -23.2 -3.12999 | gap 1 GTATGGGATAGGGAA CGCGGCAGGCAGGAGCGGGTC TGA GTCCCGCTCCTGCCTGC-GTG GGGGATGCGGACGAA Rcas_2420 3114172 - 3113063 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_2421 3115231 - 3114182 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2335 3114761 - 3114781 + g 73 -8.1 -3.98661 | opp_overlap 3114757 3114756 3114754, overlap 3114756 ACGCAGAATATCGAC GGCGCGGCG GCG CGCCTCGGC TTTATCCTGCGTCTG Rcas_2422 3116371 - 3115244 - | binding-protein-dependent transport systems inner membrane component Rcas_2423 3117400 - 3116417 - | binding-protein-dependent transport systems inner membrane component Rcas_2424 3119785 - 3117599 - | extracellular solute-binding protein Rcas_2425 3121574 - 3121155 - | hypothetical protein Rcas_2426 3122039 - 3121608 - | hypothetical protein TERM 2336 3121987 - 3121970 - G 73 -6.3 -4.28361 | gap 1 GCAAGGCGACCAAAA GCGCTCCT GCG AGGAG-GC AGGCGGCGGTTGAGG Rcas_2427 3122749 - 3122132 - | hypothetical protein Rcas_2428 3123073 - 3123267 + | ribosomal protein S21 TERM 2337 3123284 - 3123302 + F 81 -4.4 -5.00616 | opp_overlap 3123286, overlap 3123285 3123293 3123295 GGGAGTGACGCACGA TATGGCGC AGA GCGCCGGG TTTTTTGCCCGGCGC TERM 2338 3123326 - 3123286 - f 73 -13.9 -2.81133 | opp_overlap 3123285 3123284 3123293 3123295 GAGTGACGCACGATA TGGCGCAGAGCGCCGGG TTTTTTG CCCGGCGCTCTGTGCTG CCTGATGAGTATGCT TERM 2339 3123293 - 3123319 + F 84 -17.3 -2.81464 | opp_overlap 3123286, overlap 3123285 3123284 3123295 GCACGATATGGCGCA GAGCGCCGGGT TTTTT GCCCGGCGCTC TGTGCTGCCTGATGA TERM 2340 3123295 - 3123317 + F 75 -14.1 -2.95476 | opp_overlap 3123286, overlap 3123285 3123284 3123293 ACGATATGGCGCAGA GCGCCGGGT TTTTT GCCCGGCGC TCTGTGCTGCCTGAT Rcas_2429 3123367 - 3124461 + | peptide chain release factor 1 Rcas_2430 3124812 - 3125912 + | adenosine deaminase Rcas_2431 3126435 - 3125935 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Rcas_2432 3126553 - 3126990 + | cyclase/dehydrase TERM 2341 3127473 - 3127445 - g 72 -3.8 -4.56597 | gap 1 TTTTGTGGGCAAAAA CGTTCCG-ACATC GCGG GATGAACGGATCG CCACACGCCTGCACG Rcas_2433 3126996 - 3127550 + | Uracil phosphoribosyltransferase TERM 2342 3128310 - 3128325 + G 93 -7.5 -5.05782 | ATTGCTCCCTTCGCT GCGGG AATACA CCCGC TTTTTTGCGATCACT TERM 2343 3128348 - 3128370 + G 70 -12.6 -2.96395 | CGATCACTGCCGAGC GCGTGGCGCG CGC CGCGCCGCAC TGTCTGGTAATGCAT Rcas_2434 3127561 - 3128517 + | aspartate carbamoyltransferase TERM 2344 3128567 - 3128549 - g 73 -3 -4.7373 | overlap 3128550 GTATCTGATCAAAAA TGGTTCGA TCA TCGATCCG GCACGGCGCGTCGCT Rcas_2435 3128529 - 3130022 + | dihydroorotase, multifunctional complex type Rcas_2436 3130022 - 3130813 + | hypothetical protein TERM 2345 3132189 - 3132177 - g 74 -4.7 -4.62302 | overlap 3132179 CAATATTGGCAAAAA CCGCG ATA CGCCG CTGGAGCGCGCGGTC TERM 2346 3132298 - 3132324 + G 70 -12.2 -3.18582 | opp_overlap 3132307 CCGGGGCTGCGTCGC CTCCACGAACGC GCG GCGCTCGAGGAG TTGCTGCGTGAACTG Rcas_2437 3131731 - 3132834 + | dihydroorotate oxidase Rcas_2438 3134250 - 3133138 - | mandelate racemase/muconate lactonizing protein TERM 2347 3133987 - 3133934 - G 74 -9.6 -3.91858 | gap 3, overlap 3133935 TAGAGATCCCAGAAA GCGGCTTCGACGGCGGCGCGCG-CCAT GGG ATGCCCGCGCACCGACG-CGAAG-CGT TCGACGATCCCTATC TERM 2348 3133986 - 3133935 - G 70 -13.1 -2.94633 | gap 3, overlap 3133934 AGAGATCCCAGAAAG CGGCTTCGACGGCGGCGCGCG-CCAT GGG ATGCCCGCGCACCGACG-CGAAG-CG TTCGACGATCCCTAT Rcas_2439 3135098 - 3134247 - | hypothetical protein TERM 2349 3134936 - 3134967 + g 74 -5.1 -4.57073 | gap 1, opp_overlap 3134903 CCGGCGGCGTCAGGT CGGT-GTCGAACGC ACCAA GCGTCAGACCACCG TTTTTGCCGGCAGTC Rcas_2440 3135962 - 3135099 - | alpha/beta hydrolase fold Rcas_2441 3137193 - 3136108 - | oxidoreductase domain-containing protein Rcas_2442 3138239 - 3137211 - | oxidoreductase domain-containing protein Rcas_2443 3138591 - 3138256 - | hypothetical protein Rcas_2444 3140886 - 3138601 - | hypothetical protein Rcas_2445 3141495 - 3140905 - | hypothetical protein Rcas_2446 3144122 - 3141510 - | hypothetical protein Rcas_2447 3144880 - 3144125 - | cupin 2 domain-containing protein TERM 2350 3144591 - 3144567 - G 86 -7.8 -4.6821 | opp_overlap 3144568, overlap 3144568 AACGTCAACACAAAA TCGCCGGACT CCGGT AATCCGGCGT TTTGCATCACGATCT TERM 2351 3144568 - 3144590 + g 79 -9.1 -4.18494 | opp_overlap 3144568 3144567 ACGTCAACACAAAAT CGCCGGACT CCGGT AATCCGGCG TTTTGCATCACGATC TERM 2352 3144590 - 3144568 - G 71 -11.3 -3.39842 | opp_overlap 3144568, overlap 3144567 ACGTCAACACAAAAT CGCCGGACT CCGGT AATCCGGCG TTTTGCATCACGATC Rcas_2448 3146119 - 3144944 - | hypothetical protein Rcas_2449 3147492 - 3146131 - | glycoside hydrolase family protein TERM 2353 3147276 - 3147254 - G 71 -4.7 -4.4767 | overlap 3147255 GTATTGATCACAAAA TCGGCGTCG GTGAG CGACGCGGC GCGATCCGCAGTGCG Rcas_2450 3149334 - 3147562 - | radical SAM domain-containing protein TERM 2354 3148663 - 3148627 - G 74 -5.1 -4.57755 | ATCGATCAGAGAAAA GATGCCAGGTGATCG TGCCAGG CGCTCACGCAGCATC GTGATATGCGGACCG TERM 2355 3149022 - 3149011 - G 80 -5.8 -4.68593 | CGGACCATCGAAAAA CGCA GGGC TGCG CAAGACCTTTTTAGC Rcas_2451 3150493 - 3149363 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Rcas_2452 3151631 - 3150468 - | binding-protein-dependent transport systems inner membrane component Rcas_2453 3152624 - 3151635 - | binding-protein-dependent transport systems inner membrane component TERM 2356 3152213 - 3152197 - G 91 -9.5 -4.42788 | CCCAACCCCAGAAAA CTGATGA AAC TCATCAG ATAATCGGGGATGGA Rcas_2454 3154805 - 3152757 - | extracellular solute-binding protein TERM 2357 3154450 - 3154434 - G 82 -11.5 -4.08216 | opp_overlap 3154443 3154448 CCAGCGGTCCGAAAA GCCGCGG AAG CCGCGAC GGATGGTTCCGCCAT Rcas_2455 3156015 - 3154966 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2358 3156918 - 3156947 + G 73 -11.3 -3.61178 | TACGCGCGATGGCGG CGCTCGTGCGGCG ATTA CGCTGCTGGAGCG TTTCCCATCAATCAC Rcas_2456 3156193 - 3157251 + | LacI family transcription regulator TERM 2359 3157709 - 3157678 - g 76 -5.6 -4.60041 | overlap 3157679 ATTTACTGCGAAAAA CCGTCGGCGGCGAC GCTG GACGACGCCATCGA TCTGGCGCGCCGCGC Rcas_2457 3157339 - 3158490 + | oxidoreductase domain-containing protein Rcas_2458 3158506 - 3159672 + | hypothetical protein Rcas_2459 3159676 - 3160554 + | xylose isomerase domain-containing protein TERM 2360 3160708 - 3160675 - f 72 -13.3 -2.54298 | gap 1, opp_overlap 3160675 3160677 3160678, overlap 3160674 3160672 3160679 3160681 GATATCGTACAATAG CAGA-GACGCACATAC GCT GCATGTGCGCCATCTG TACTATAATAGCCAT TERM 2361 3160703 - 3160679 - f 70 -12.9 -2.94726 | opp_overlap 3160678 3160677 3160675, overlap 3160675 3160674 3160672 3160681 TCGTACAATAGCAGA GACGCACATAC GCT GCATGTGCGCC ATCTGTACTATAATA Rcas_2460 3160762 - 3161682 + | putative PAS/PAC sensor protein Rcas_2461 3161679 - 3162824 + | acyl-CoA dehydrogenase domain-containing protein TERM 2362 3162992 - 3163004 + G 75 -3.3 -4.91873 | overlap 3162985 AGTCGTTTCGGAGTG CAGCG CAT CGCTA TTTTTGGTTCATATG Rcas_2462 3162920 - 3163216 + | DNA polymerase beta subunit Rcas_2463 3163295 - 3163531 + | hypothetical protein Rcas_2464 3163572 - 3164615 + | oxidoreductase domain-containing protein Rcas_2465 3164612 - 3165046 + | hypothetical protein TERM 2363 3165553 - 3165580 + G 76 -11.2 -3.76224 | overlap 3165540 GGCGCGCGGATCGAG GCGGTTGGCGAG TTTC TTCGCCGTCCGC TTTCGTCGGTGCAGG TERM 2364 3165669 - 3165726 + G 71 -11.1 -3.48276 | gap 1 GGCGCTGTTTGCCTG GGCGCGC-GTCGATGGACCGGTGCCGGA ACT TTCGTCGCTGGCGCATCGCCTGCGCGAC TTGTATGCGCCGGCG Rcas_2466 3165037 - 3167655 + | polynucleotide adenylyltransferase region Rcas_2467 3169028 - 3167709 - | Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein TERM 2365 3168362 - 3168352 - G 93 -8.2 -5.0916 | opp_overlap 3168351 TTGCCAACAGAAAAA CCCG CTT CGGG ATCATATGCAGTGAC Rcas_2468 3171166 - 3169040 - | ATP-dependent DNA helicase RecQ Rcas_2469 3173282 - 3171315 - | multi-sensor hybrid histidine kinase TERM 2366 3172958 - 3172931 - G 95 -10.6 -4.52589 | gap 1, opp_overlap 3172946, overlap 3172916 TGCTTTCACAGAAAA GCACC-GCAGCCA GGG CGGCTGCCAGTGC CGTCATTGCCGACTC Rcas_2470 3175605 - 3173335 - | diguanylate cyclase with GAF sensor TERM 2367 3173760 - 3173738 - G 79 -8.4 -4.30844 | AGCTCACGACGAAAA GTGTTGCTGA CTG CCTGCAACAC CTGATCGCCGATGGG Rcas_2471 3175840 - 3178170 + | hypothetical protein TERM 2368 3179159 - 3179181 + G 71 -13.4 -2.59564 | overlap 3179158 GGGTAGTGGTCGAGG CGGCGGCG GTCGGCA CGCCGCCG ATTGTCACATCGACA Rcas_2472 3178177 - 3179436 + | glycosyl transferase group 1 TERM 2369 3179585 - 3179532 - g 78 -14.5 -3.01712 | gap 1, overlap 3179574 TGCGGGCGCTGAAGA CGCTGGCGCCGGATACG-CTCGCAAT CGT ACCGCGAGTCGAAACCGGTCCCAGCG CATTCGACGGGCTGG TERM 2370 3179697 - 3179739 + G 100 -12.7 -4.40894 | gap 2, overlap 3179699 CCTACGCCTGGCTCG TGCTGGCGACGCTGCTCTGGC TGC GCCTG-GC-GCGTCGCCGGTG TTTTGATGTCATTTA TERM 2371 3179699 - 3179737 + G 90 -15.3 -3.7948 | gap 2, overlap 3179697 TACGCCTGGCTCGTG CTGGCGACGCTGCTCTGGC TGC GCCTG-GC-GCGTCGCCGG TGTTTTGATGTCATT Rcas_2473 3179441 - 3180652 + | glycosyl transferase group 1 TERM 2372 3180665 - 3180711 + T 95 -12.5 -4.25104 | gap 2, opp_overlap 3180668 3180672 3180673, overlap 3180667 3180674 TGAGTGTGTGCTTTA AAATCAACCGGGTGGACGAAGGC ACT GCCTTCGTCCACCC--TTGAATG TTTTCATGAAAACCG TERM 2373 3180667 - 3180709 + T 93 -15.1 -3.73042 | gap 2, opp_overlap 3180668 3180672 3180673, overlap 3180665 3180674 AGTGTGTGCTTTAAA ATCAACCGGGTGGACGAAGGC ACT GCCTTCGTCCACCC--TTGAA TGTTTTCATGAAAAC TERM 2374 3180708 - 3180668 - T 100 -18.6 -4.07568 | gap 2, opp_overlap 3180667 3180665 3180674, overlap 3180672 3180673 GTGTGTGCTTTAAAA TCAACCGGGTGGACGAAGGC ACT GCCTTCGTCCACCC--TTGA ATGTTTTCATGAAAA TERM 2375 3180706 - 3180672 - T 100 -18.6 -3.66908 | opp_overlap 3180667 3180665 3180674, overlap 3180668 3180673 GTGCTTTAAAATCAA CCGGGTGGACGAAGGC ACT GCCTTCGTCCACCCTT GAATGTTTTCATGAA TERM 2376 3180705 - 3180673 - T 100 -22.1 -2.79823 | opp_overlap 3180667 3180665 3180674, overlap 3180672 3180668 TGCTTTAAAATCAAC CGGGTGGACGAAGGC ACT GCCTTCGTCCACCCT TGAATGTTTTCATGA TERM 2377 3180674 - 3180704 + T 100 -25.6 -3.29856 | opp_overlap 3180673 3180672 3180668, overlap 3180667 3180665 GCTTTAAAATCAACC GGGTGGACGAAGGC ACT GCCTTCGTCCACCC TTGAATGTTTTCATG Rcas_2474 3183510 - 3181924 - | Orn/DAP/Arg decarboxylase 2 TERM 2378 3183638 - 3183614 - R 100 -17.2 -4.31433 | GATGGGCATAAGAAA CCCCCGCACT CAGGC AGTGCGGGGG CGCATATCCGAGAGG Rcas_2475 3183877 - 3183623 - | hypothetical protein TERM 2379 3183859 - 3183839 - G 72 -4 -4.56775 | opp_overlap 3183841 3183842, overlap 3183840 3183841 ATGGCGCTTCAAAAA CTGCTGC-GC ACC GCTGC-GCAG GTTTTTGCCGGAGAG TERM 2380 3183841 - 3183860 + g 83 -7.8 -4.56597 | opp_overlap 3183839 3183841 3183840, overlap 3183842 GGCGCTTCAAAAACT GCTGCGCA CCGC TGCGCAGG TTTTTGCCGGAGAGC Rcas_2476 3185577 - 3184111 - | monogalactosyldiacylglycerol synthase TERM 2381 3184494 - 3184528 + g 93 -14.3 -4.09685 | opp_overlap 3184491 3184494 3184496 GCGTCTCGACAATCA CACGCGCAGCGTCGG GGCGA CCAATGTTGCGCGTG TTTTCCCGCATGCGC Rcas_2477 3187400 - 3186249 - | AAA family ATPase Rcas_2478 3190577 - 3187446 - | hypothetical protein TERM 2382 3188050 - 3188021 - G 78 -7.1 -4.62069 | gap 1 TGGTCATGGTAAAAA GCGGCGCCTGCG CAACGAC CGCAC-CGCCGC TATAGATCGCCAGAA TERM 2383 3188242 - 3188215 - G 71 -13.4 -2.51464 | overlap 3188198 3188214 GCAGCAGCCAGCAAC CGCGCGATGCGC ACCG GCGCATCGAACG TATCGCCGATAATAA Rcas_2479 3191174 - 3192106 + | branched-chain amino acid aminotransferase Rcas_2480 3192109 - 3193266 + | acetyl-CoA acetyltransferase Rcas_2481 3193892 - 3193275 - | hypothetical protein Rcas_2482 3194339 - 3197008 + | pyruvate phosphate dikinase Rcas_2483 3199034 - 3197790 - | glycosyl transferase group 1 TERM 2384 3199947 - 3199979 + G 81 -2.6 -5.22289 | gap 1, overlap 3199948 GCGCACTGCCGATCC TGGCACTGACG-GCG CTGG CGCTCGTTCCTGCCG TTTTTCTGTTTGCTG Rcas_2484 3199448 - 3200632 + | major facilitator transporter Rcas_2485 3202318 - 3201011 - | hypothetical protein TERM 2385 3202301 - 3202311 + g 73 -6.8 -4.2717 | TATCGCTTCTTCCTG CGGT TCG ACCG TTTTCATCGCATCGT Rcas_2486 3202404 - 3203330 + | inosine/uridine-preferring nucleoside hydrolase Rcas_2487 3204017 - 3203343 - | two component transcriptional regulator TERM 2386 3204452 - 3204486 + G 74 -2.2 -4.86001 | gap 3, overlap 3204453 3204475 3204480 TGCGCCCCGATCAGT GGCGCACGGTC--ATCG ATAT CGATCTGACCG-GCGCA TTTTTGTGCAGTCGT Rcas_2488 3204124 - 3204879 + | short-chain dehydrogenase/reductase SDR Rcas_2489 3204959 - 3206020 + | XRE family transcriptional regulator Rcas_2490 3206250 - 3207671 + | malate dehydrogenase TERM 2387 3207848 - 3207794 - T 73 -13.5 -2.80492 | overlap 3207772 CAGGACCATCAAGGA TGTGGAGCGGCGGACGTTGGCTTCG ACAGG CTCAGCCAACATCTGCCGCTCGACG GTTACCACGCACAAT TERM 2388 3207930 - 3207902 - T 84 -11.1 -4.08706 | gap 1 GCTCTATGAGAGAAA GTGGCAGCCGAC AACCCG GTCG-CTGCCAC GACTCGCATGCGCAT Rcas_2491 3209605 - 3207974 - | hypothetical protein TERM 2389 3209351 - 3209315 - G 79 -10.8 -3.90744 | overlap 3209299 CCGCGCCTGAAATAA CCCCACAAGCGCCGCC AACAG GACGACGCCTGTCAGG AGGAATATCATCGCC TERM 2390 3210374 - 3210356 - g 71 -13.1 -2.98493 | opp_overlap 3210355, overlap 3210353 GTGACGATGAAACCA GCCGCGC CAATC GCGCGGC ATATCTCGATGCCGT Rcas_2492 3209914 - 3210561 + | flavodoxin-like protein Rcas_2493 3213774 - 3210643 - | Beta-galactosidase Rcas_2494 3215403 - 3213973 - | glutamine synthetase catalytic region TERM 2391 3215052 - 3215037 - G 76 -6.1 -4.57569 | GCACCTCGCCAAAAA CCAGG ACCTTG CCTGG ACCAAACACGTCTGC TERM 2392 3215394 - 3215384 - G 71 -5.4 -4.4017 | GGAATTTCCAGAAAA TCAC GCA GTGA AGTTGTCATTGGAGC TERM 2393 3217027 - 3216998 - g 86 -12.1 -4.15222 | gap 1, opp_overlap 3217001, overlap 3217015 AGCTTCGTGAAGAAA CGGCGGCGCGCGAG CAA CT-GAGCGCCACCG TGCGCCAGCTCAGCG Rcas_2495 3215749 - 3217455 + | anti-sigma-factor antagonist Rcas_2496 3217665 - 3218819 + | hypothetical protein Rcas_2497 3220879 - 3219035 - | ABC transporter related TERM 2394 3219247 - 3219228 - G 72 -4.2 -4.5442 | overlap 3219229 TGGGCAATCACAAAA CTGGTGCG CCCG CGCAACAA CCGTCGCAGCGCCTG TERM 2395 3220363 - 3220338 - G 91 -9.7 -4.61747 | gap 1 GGAATAACGATAAAA CTCG-CCAGCGC CAG GCGCCAGTCGAG CGCCACCATTGCTAC TERM 2396 3220807 - 3220827 + g 70 -10.4 -3.61328 | gap 1, opp_overlap 3220801 3220797 3220806 3220805, overlap 3220805 3220824 3220825 GATAACCGAGCAATC GCCGC-GCG ACTG CGCCGCGGC TTTCAGCCTGTTCCT Rcas_2498 3221349 - 3220876 - | hypothetical protein Rcas_2499 3223211 - 3221406 - | ABC transporter transmembrane region TERM 2397 3221704 - 3221690 - G 71 -11.4 -3.44051 | CGTCGAGGATCAGAA TGCGCG GAT CGCGCA GAAGGGCGCGCGCGA TERM 2398 3222507 - 3222474 - G 73 -3.1 -4.72272 | gap 1, opp_overlap 3222488, overlap 3222479 GTTGCCGATGAAAAA GATAAGCGGGAATGTC AGC GACAT-CGCGCGGATC GATTGCAGGTTGGCG Rcas_2500 3223609 - 3223208 - | MarR family transcriptional regulator Rcas_2501 3224019 - 3224309 + | antibiotic biosynthesis monooxygenase Rcas_2502 3226064 - 3224466 - | hypothetical protein TERM 2399 3226132 - 3226075 - R 82 -14.4 -3.26807 | gap 3, opp_overlap 3226084 3226086 3226091 3226094, overlap 3226073 3226077 3226086 3226091 3226094 ATCATCGAAAAACCA CATCCATGACACCGAAGAAGGGGCAGGTC TGA GACCTGCCCCTTCTTCGGTGT---GGTCT CAGACCCGCCCCCGT TERM 2400 3226133 - 3226077 - R 91 -19.5 -3.19102 | opp_overlap 3226084 3226086 3226091 3226094, overlap 3226073 3226075 3226086 3226091 3226094 CATCGAAAAACCACA TCCATGACACCGAAGAAGGGGCAGGTC TGA GACCTGCCCCTTCTTCGGTGTGGTCTC AGACCCGCCCCCGTA TERM 2401 3226084 - 3226126 + r 100 -35.2 -2.62184 | opp_overlap 3226073 3226075 3226077 3226086 3226091 3226094, overlap 3226086 3226091 3226094 AAACCACATCCATGA CACCGAAGAAGGGGCAGGTC TGA GACCTGCCCCTTCTTCGGTG TGGTCTCAGACCCGC TERM 2402 3226086 - 3226124 + r 100 -32 -2.85351 | opp_overlap 3226073 3226075 3226077 3226086 3226091 3226094, overlap 3226084 3226091 3226094 ACCACATCCATGACA CCGAAGAAGGGGCAGGTC TGA GACCTGCCCCTTCTTCGG TGTGGTCTCAGACCC TERM 2403 3226124 - 3226086 - R 100 -32 -2.82193 | opp_overlap 3226086 3226084 3226091 3226094, overlap 3226073 3226075 3226077 3226091 3226094 ACCACATCCATGACA CCGAAGAAGGGGCAGGTC TGA GACCTGCCCCTTCTTCGG TGTGGTCTCAGACCC TERM 2404 3226091 - 3226119 + r 100 -23.3 -3.1544 | opp_overlap 3226086 3226073 3226075 3226077 3226091 3226094, overlap 3226086 3226084 3226094 ATCCATGACACCGAA GAAGGGGCAGGTC TGA GACCTGCCCCTTC TTCGGTGTGGTCTCA TERM 2405 3226119 - 3226091 - R 100 -23.3 -3.14647 | opp_overlap 3226091 3226086 3226084 3226094, overlap 3226086 3226073 3226075 3226077 3226094 ATCCATGACACCGAA GAAGGGGCAGGTC TGA GACCTGCCCCTTC TTCGGTGTGGTCTCA TERM 2406 3226094 - 3226116 + r 100 -19.2 -3.71487 | opp_overlap 3226091 3226086 3226073 3226075 3226077 3226094, overlap 3226091 3226086 3226084 CATGACACCGAAGAA GGGGCAGGTC TGA GACCTGCCCC TTCTTCGGTGTGGTC TERM 2407 3226144 - 3226094 - R 100 -19.8 -3.71487 | gap 1, opp_overlap 3226094 3226091 3226086 3226084, overlap 3226091 3226086 3226073 3226075 3226077 CATGACACCGAAGAA GGGGCAGGTCTGAGACCTGCCCC TTCTTC GGTGT-GGTCTCAGACCCGCCCC CGTACAGGCAGGTCT TERM 2408 3226333 - 3226377 + r 100 -22.3 -2.79796 | gap 1 GACCCGGCCTCCACC GGCGGGTCTGAGACCCGGCC TCCACC GGC-GGGTCTGAGACCCGCC TCTCCTACCGTGCGA Rcas_2503 3228805 - 3226382 - | hypothetical protein Rcas_2504 3229639 - 3228872 - | hypothetical protein Rcas_2505 3232202 - 3229896 - | hypothetical protein TERM 2409 3230602 - 3230589 - G 74 -9.5 -3.82433 | AGAACGATCAGCAAA CGCCG CCAA CGGCG CCGCAGCAGCGAAAA TERM 2410 3230797 - 3230781 - G 70 -7.2 -3.98204 | overlap 3230789 AAACAGACTGAGAAA CGCCAC AATGA GCGGCG ACGCTGATCGCACGG Rcas_2506 3234394 - 3232268 - | hypothetical protein TERM 2411 3233804 - 3233786 - G 74 -5.2 -4.61231 | GTAGACCCCGAAAAA GAACAGGT AGT ACCAGCTC GTGTATCCCGTCAGC TERM 2412 3234316 - 3234304 - G 78 -6.9 -4.57073 | overlap 3234306 TAGCCGTGGTAAAAA CCGGC AGC ACCGG CGCCATAATGATCAG Rcas_2507 3235218 - 3234400 - | methyltransferase type 12 TERM 2413 3235330 - 3235380 + r 74 -4 -4.83032 | gap 3, opp_overlap 3235349, overlap 3235365 ACAGAGACGCAGAGA GCGCAG-AGGGACGCCAGAAGTGCG CCTT TGCAC--CTGCGGTCCCGACTGCGC TTTTGTCTTTGATCT Rcas_2508 3236804 - 3235482 - | hypothetical protein Rcas_2509 3238622 - 3237675 - | ATPase Rcas_2510 3239626 - 3238682 - | hypothetical protein Rcas_2511 3240811 - 3239648 - | hypothetical protein TERM 2414 3239767 - 3239749 - G 70 -10.2 -3.55444 | CCCGCAGTTGCGAAA GCAGCGCC AGC AGCGCCGC CTCGTCGATGGGACG Rcas_2512 3241794 - 3240808 - | hypothetical protein Rcas_2513 3242225 - 3243382 + | 6-phosphofructokinase TERM 2415 3244204 - 3244235 + G 70 -7.2 -4.06419 | gap 1, overlap 3244205 CGAGTCGCTCGAGAT GGCTGCCGAAGC-CG GTT CGCGCTTCGCCGGCG TTCTTTGTGGACGCG Rcas_2514 3243395 - 3244435 + | tagatose 1,6-diphosphate aldolase TERM 2416 3244513 - 3244554 + F 95 -15.9 -3.93695 | gap 1, opp_overlap 3244519, overlap 3244516 3244519 CCCCGCACACGCTCG TATGAACGCGCCGCTGCGTC TGA GACGCGGCGGCGCGTG-GTG TTTCTGGATGATCCA TERM 2417 3244516 - 3244552 + F 100 -20.1 -3.55824 | opp_overlap 3244519, overlap 3244513 3244519 CGCACACGCTCGTAT GAACGCGCCGCTGCGTC TGA GACGCGGCGGCGCGTGG TGTTTCTGGATGATC TERM 2418 3244519 - 3244549 + F 100 -26.2 -2.90511 | opp_overlap 3244519, overlap 3244516 3244513 ACACGCTCGTATGAA CGCGCCGCTGCGTC TGA GACGCGGCGGCGCG TGGTGTTTCTGGATG TERM 2419 3244549 - 3244519 - f 100 -24 -3.14683 | opp_overlap 3244519 3244516 3244513 ACACGCTCGTATGAA CGCGCCGCTGCGTC TGA GACGCGGCGGCGCG TGGTGTTTCTGGATG TERM 2420 3245304 - 3245321 + G 73 -11.3 -3.62522 | overlap 3245307 ACGCTGGCGTGTCCG GAACCGC GCAT GCGGTTC TTATTCCCGAAATTC Rcas_2515 3244679 - 3245797 + | 6-phosphofructokinase Rcas_2516 3247172 - 3245835 - | glycogen debranching enzyme-like protein Rcas_2517 3247318 - 3247692 + | hypothetical protein Rcas_2518 3247714 - 3249108 + | DNA methylase N-4/N-6 domain-containing protein TERM 2421 3249523 - 3249549 + F 100 -20.9 -5.01732 | TTTCTGTGGTCACGC GCCCCCGCAGC ACGAG GCTGCGGGGGC TTTTTTGGGCGCATT TERM 2422 3249866 - 3249881 + G 74 -10.4 -3.81146 | opp_overlap 3249862, overlap 3249859 CTGCGCAACCAGCGG CAGCGG GTTT CCGCTG TTGTTCATTCACGGC Rcas_2519 3249795 - 3250526 + | alpha/beta hydrolase fold TERM 2423 3250822 - 3250799 - g 70 -10.2 -3.63073 | opp_overlap 3250798 3250799, overlap 3250777 GACATTCTGGAAGAA CTCGACAGCG ACGA CGCTGCCGCG ATTCTTACCGAAGAT TERM 2424 3251203 - 3251180 - g 71 -9.5 -3.75292 | ACCGACCAGGAAGAA GTCGCGCGC ATGGTG GCGCGCTAC GACCTTGCCGCGTTG Rcas_2520 3250523 - 3251887 + | magnesium transporter TERM 2425 3252235 - 3252252 + G 78 -10.5 -4.0162 | overlap 3252206 CATCACGCGCAGATT CGGCGCG AGGG CGCGTCG TTTGTCCTCTACGAC Rcas_2521 3252091 - 3254931 + | FHA domain-containing protein Rcas_2522 3255228 - 3255689 + | hypothetical protein Rcas_2523 3255724 - 3256482 + | peptidase C26 TERM 2426 3256512 - 3256472 - f 74 -12.5 -3.14564 | overlap 3256474 3256488 CCATCGCGGGACGAA CACCCGGGTAAGCGAAGGC GTG GTCTCCGCCTACCCGGTCA CGCTTCCGTTCAAGG TERM 2427 3256510 - 3256474 - f 82 -15.1 -3.13522 | overlap 3256472 3256488 ATCGCGGGACGAACA CCCGGGTAAGCGAAGGC GTG GTCTCCGCCTACCCGGT CACGCTTCCGTTCAA Rcas_2524 3256770 - 3257267 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 2428 3258295 - 3258278 - g 73 -8.3 -3.96624 | CACCTCTATGACAAA GCGCCGC GACC GGGGCGC AAACTGGGACATGTA Rcas_2525 3257264 - 3258391 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 2429 3258556 - 3258605 + G 72 -11.9 -3.32997 | gap 1, opp_overlap 3258556, overlap 3258572 3258573 CATCTGGCTGATCAA CCTGACGCGGC-GCGTCCGCAACC TGT GGCGGCGGTTGCTGCGGCGGCAGG TTGCATTTGTGCGCA TERM 2430 3258605 - 3258556 - g 70 -11.9 -3.14344 | gap 1, opp_overlap 3258556 3258572 3258573 CATCTGGCTGATCAA CCTGACGCGGC-GCGTCCGCAACC TGT GGCGGCGGTTGCTGCGGCGGCAGG TTGCATTTGTGCGCA TERM 2431 3258572 - 3258610 + G 81 -11.6 -3.87815 | opp_overlap 3258556, overlap 3258556 3258573 CTGACGCGGCGCGTC CGCAACCTGTGGCGGCGG TTG CTGCGGCGGCAGGTTGCA TTTGTGCGCATCCCA TERM 2432 3258573 - 3258609 + G 79 -15.1 -2.92475 | opp_overlap 3258556, overlap 3258556 3258572 TGACGCGGCGCGTCC GCAACCTGTGGCGGCGG TTG CTGCGGCGGCAGGTTGC ATTTGTGCGCATCCC TERM 2433 3260146 - 3260162 + G 72 -7.9 -4.18018 | overlap 3260153 GCCATCGAAGACGTT GCGCGAG GCG CTGGCGC TTTTGCGTCAACCGC Rcas_2526 3258524 - 3260209 + | signal peptide peptidase SppA, 36K type TERM 2434 3260314 - 3260302 - g 82 -6.2 -4.86731 | opp_overlap 3260302 CTCTCGCAAACAAAA GCGC GAGCG GCGC TGTAATCGATGTCAA TERM 2435 3260517 - 3260501 - g 76 -7.9 -4.2679 | opp_overlap 3260501, overlap 3260502 GAATGTGGACGAAAA CCCGCGC CTG GCGCAGA TGTTCCAGGTGCAGG Rcas_2527 3260283 - 3261164 + | thioredoxin TERM 2436 3261333 - 3261290 - f 93 -16 -3.59979 | gap 1, opp_overlap 3261294, overlap 3261291 3261294 TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGCTCTG CTCGGGGTGACCATG TERM 2437 3261331 - 3261291 - f 84 -17 -2.75844 | opp_overlap 3261294, overlap 3261290 3261294 TCGCTCAGGGTAAAC GCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGCT-C TGCTCGGGGTGACCA TERM 2438 3261294 - 3261329 + F 79 -15.4 -2.79183 | gap 1, opp_overlap 3261294 3261291 3261290 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC TCTGCTCGGGGTGAC TERM 2439 3261329 - 3261294 - f 88 -19.8 -2.65354 | gap 1, opp_overlap 3261294, overlap 3261291 3261290 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC TCTGCTCGGGGTGAC Rcas_2528 3261406 - 3262059 + | binding-protein-dependent transport systems inner membrane component Rcas_2529 3262077 - 3263027 + | substrate-binding region of ABC-type glycine betaine transport system Rcas_2530 3263032 - 3264012 + | ABC transporter related Rcas_2531 3263996 - 3264637 + | binding-protein-dependent transport systems inner membrane component TERM 2440 3264974 - 3264986 + F 76 -10.5 -3.72742 | opp_overlap 3264970 TCGTCACAGTACGCG GCGCC ACC GGCGC TTATGTTGATCGTAA TERM 2441 3265545 - 3265529 - g 100 -3.7 -5.55855 | GCCAAAAAAAGAAAA TGTGG GTACACG CCACA AGCGGCGCATTGATG TERM 2442 3265915 - 3265960 + G 100 -9.1 -4.8622 | ATGCGCACGATCTGT CCGACCTGAT-CACCGCGCTC GGTCTG GGGCGTG-TGCATCTGGTCGG TTTTTCGTTCGGGGC TERM 2443 3266136 - 3266163 + G 82 -6.2 -4.87665 | gap 1, opp_overlap 3266125, overlap 3266138 AAACGCGCCGTGCAG GACG-GCAACCTG GAA CAGGGTGCGCGGC TTTTTATCGATGGCA Rcas_2533 3265323 - 3266507 + | alpha/beta hydrolase fold Rcas_2534 3268412 - 3266874 - | glycosyltransferase TERM 2444 3267475 - 3267448 - G 73 -6.3 -4.36262 | gap 1, overlap 3267426 3267427 3267449 3267470 ACAGGGACAGGAAAA CTGCCGCTG-CG TGCGC CGACAACGGCAA GAGCGCCGATAACTG TERM 2445 3268145 - 3268133 - G 70 -10.5 -3.63968 | GCGGAAAGCGGTAAA GCGCC AGC GGCGC AAGCGAAGGCGGATC TERM 2446 3268422 - 3268434 + H 77 -3.3 -5.00616 | opp_overlap 3268433 GTTCATTGTCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2447 3268570 - 3268582 + H 77 -3.3 -5.00616 | opp_overlap 3268581 GTTCATGATCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2448 3268865 - 3268877 + H 77 -3.3 -5.00616 | opp_overlap 3268876 GTTCATGATCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2449 3269032 - 3269044 + H 77 -3.3 -5.00616 | opp_overlap 3269043 GTTCATGATCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2450 3269180 - 3269192 + H 77 -3.3 -5.00616 | opp_overlap 3269191 GTTCATGATCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2451 3269347 - 3269359 + H 77 -3.3 -5.00616 | opp_overlap 3269358 GTTCATGATCGTTCA CCGCT CAG AGAGG TTTTTTGAACCACAG TERM 2452 3269661 - 3269673 + H 77 -3.3 -5.00616 | opp_overlap 3269672 GTTCATGATCGTTCA CCGCT TAG AGAGG TTTTTTGAACCACAG TERM 2453 3270264 - 3270274 + G 81 -6.8 -4.72272 | overlap 3270252 3270249 GCATCTATCGCGCTG CGGA AGG TCCG TTTTTGCTGCGACCA Rcas_2535 3269858 - 3271333 + | zeta-phytoene desaturase TERM 2454 3271807 - 3271772 - T 88 -13.2 -3.6106 | opp_overlap 3271775 3271776, overlap 3271776 GGCAATATCTTTAAA CCAACCCCCTCGCAGC ATAT GCTGCGAGGGGGGTTT TTTTATGGCGCCATT TERM 2455 3271775 - 3271804 + T 100 -19.3 -5.60993 | opp_overlap 3271772 3271776, overlap 3271776 AATATCTTTAAACCA ACCCCCTCGCAGC ATAT GCTGCGAGGGGGG TTTTTTTATGGCGCC TERM 2456 3271803 - 3271776 - T 100 -22.8 -3.52472 | opp_overlap 3271775 3271776, overlap 3271772 ATATCTTTAAACCAA CCCCCTCGCAGC ATAT GCTGCGAGGGGG GTTTTTTTATGGCGC TERM 2457 3271776 - 3271803 + T 100 -22.8 -3.95873 | opp_overlap 3271776 3271772, overlap 3271775 ATATCTTTAAACCAA CCCCCTCGCAGC ATAT GCTGCGAGGGGG GTTTTTTTATGGCGC Rcas_2536 3272559 - 3271810 - | short-chain dehydrogenase/reductase SDR TERM 2458 3272786 - 3272751 - R 72 -14 -2.65354 | gap 1, overlap 3272747 CTCAGGGTAAACGCA GCGAGGAGTCG-AAGCG GGT CGCGCACGACCCCTCGC AATGATCATGCTTTC Rcas_2537 3275207 - 3272826 - | hypothetical protein Rcas_2538 3277439 - 3275358 - | TAP domain-containing protein TERM 2459 3275668 - 3275690 + g 86 -12.7 -4.08945 | opp_overlap 3275652 3275651 CAGCGCGCGATGGTC GCGCCAGGG GACGG CTCTGGCGC TTTTCCGCCGGTGAT TERM 2460 3277436 - 3277472 + g 77 -13.7 -3.35775 | overlap 3277434 ACAATCCGCCCGTCC TCACCTGCGCTCCTCGC AAT GAGAAAAGCGCAGGTGA TATTTAGCCACTGCT Rcas_2539 3277577 - 3278935 + | peptidase S8 and S53 subtilisin kexin sedolisin Rcas_2540 3280838 - 3279012 - | magnesium chelatase ATPase subunit D TERM 2461 3279887 - 3279924 + g 71 -9.2 -3.79906 | opp_overlap 3279889, overlap 3279890 GCGGGATGGTCAACT CATCGTCCGACG-GCGGC TCAG GCGGCGCGTCGGATG-TG TTGTTGTCGGCGTCG TERM 2462 3279890 - 3279922 + g 74 -12 -3.48378 | gap 1, opp_overlap 3279889, overlap 3279887 GGATGGTCAACTCAT CGTCCGACG-GCGGC TCAG GCGGCGCGTCGGATG TGTTGTTGTCGGCGT Rcas_2541 3281581 - 3280838 - | FHA domain-containing protein Rcas_2542 3281782 - 3282303 + | hypothetical protein TERM 2463 3282986 - 3282937 - g 76 -8.6 -4.1899 | CCAGTTGACCGAAAA TCTGCAACGGCGCG-ACCTGAACG ACCT CGAGCAGGCGCGCGCC-TTCCAGA AATTGCGCGAGCAGA Rcas_2543 3282665 - 3283741 + | parB-like partition protein Rcas_2544 3285064 - 3284165 - | binding-protein-dependent transport systems inner membrane component Rcas_2545 3286057 - 3285107 - | binding-protein-dependent transport systems inner membrane component Rcas_2546 3287614 - 3286148 - | extracellular solute-binding protein Rcas_2547 3288859 - 3287777 - | oxidoreductase domain-containing protein Rcas_2548 3289279 - 3288965 - | hypothetical protein Rcas_2549 3289748 - 3289284 - | dehydratase Rcas_2550 3290906 - 3289752 - | L-carnitine dehydratase/bile acid-inducible protein F Rcas_2552 3292358 - 3291621 - | GntR family transcriptional regulator Rcas_2553 3293036 - 3294340 + | mandelate racemase/muconate lactonizing protein Rcas_2554 3294633 - 3296069 + | Alpha-L-fucosidase TERM 2464 3296165 - 3296180 + T 71 -6.8 -4.16016 | GCAGAAGGTCGAGGC GCATCC GGGT GGGTGC TTTCTTCGGCAATGC Rcas_2555 3296999 - 3296577 - | OsmC family protein TERM 2465 3296811 - 3296825 + g 78 -3.5 -5.07107 | overlap 3296806 GATTGCCAGCCGATG CAGCG TCGCT CGTTG TTTTTTCAGAATTTC TERM 2466 3297129 - 3297151 + r 79 -14.8 -2.88544 | CCTGTCGTTGTTGGT GGGGCCGGTC TCA GACCTGCCCC TATCTGCCCCTGCGG Rcas_2556 3298372 - 3297185 - | beta-lactamase Rcas_2557 3301077 - 3298669 - | ATP-dependent protease La TERM 2467 3299464 - 3299478 + g 71 -12.8 -3.10715 | GTATTCGCGGATCAG GCGGCG AAG CGCCGC TTCGGTGATCGTCGG Rcas_2558 3301493 - 3301074 - | molecular chaperone (small heat shock protein)-like protein Rcas_2559 3301742 - 3301512 - | hypothetical protein Rcas_2560 3302842 - 3301925 - | luciferase family protein TERM 2468 3302857 - 3302880 + H 72 -11 -3.38294 | overlap 3302856 3302851 TCAGTGTTCGAGCAG GCAGGGCG CCAGCATT CGCCCTGC TCTCTTTGTGTAGAC Rcas_2561 3302911 - 3303261 + | ribosomal protein L19 Rcas_2562 3303283 - 3303966 + | methyltransferase type 11 Rcas_2563 3303963 - 3304637 + | ribonuclease H Rcas_2564 3304634 - 3305383 + | hypothetical protein TERM 2469 3306238 - 3306215 - g 72 -13.8 -2.78384 | CGGGCGGCGATCACA CGCGCCAGCC GCAC GTCTGGCGCG AGGTGCTACGCGACC Rcas_2565 3305389 - 3306435 + | phospho-2-dehydro-3-deoxyheptonate aldolase Rcas_2566 3307596 - 3306565 - | ribokinase-like domain-containing protein Rcas_2567 3307709 - 3308050 + | hypothetical protein Rcas_2568 3308655 - 3308056 - | methyltransferase type 11 Rcas_2569 3308790 - 3309371 + | ECF subfamily RNA polymerase sigma-24 factor Rcas_2570 3309390 - 3309650 + | hypothetical protein Rcas_2571 3309694 - 3310296 + | ECF subfamily RNA polymerase sigma-24 factor Rcas_2572 3310328 - 3310639 + | hypothetical protein Rcas_2573 3310715 - 3311017 + | hypothetical protein Rcas_2574 3323304 - 3311719 - | LamG domain-containing protein TERM 2470 3314776 - 3314825 + g 75 -15 -2.78816 | gap 2, opp_overlap 3314769 3314772 3314770, overlap 3314808 CAGATCAACCACCGG CGCTGGTGGCGTAACCGGCTGCGG TGTG CCGTTGCCGG-TGCGGC-CCAGCG TGTCCTGGGCAGTCG TERM 2471 3315894 - 3315947 + g 70 -13.2 -2.88069 | gap 2, opp_overlap 3315911, overlap 3315892 CTTCGAGCGACTGCA CCCCGCTCGCTACCGAACCGGTATCG GTCA CGATGCCGG-TCAG-GGTGAGCGTGG TAGTTATGCTCTCAC TERM 2472 3317674 - 3317620 - G 70 -12.1 -3.16564 | overlap 3317648 GCTGGACGTCACCAA CG-CGTAAGGCGCTGCGGCGCCGGGAG AAG CCGCAGCCGCCGCAGCG-CTCACATCG GACCCGGACCGCTCG Rcas_2575 3325365 - 3323722 - | von Willebrand factor type A TERM 2473 3324548 - 3324568 + g 85 -3.1 -5.3798 | opp_overlap 3324547 3324546, overlap 3324547 3324549 TCACGCGGGTAAATC GCCACCAGC GGC GTTGGCGGA TTTTTGTTCTTGTTG TERM 2474 3325384 - 3325427 + r 86 -13.8 -3.51825 | opp_overlap 3325372, overlap 3325387 CTACCCCTTCTCAGT GGTGCACCATCGCTGCACGC GCAT GGGCGCATCGATGGTGCGTC TTGTCCTTGCCATCC TERM 2475 3325387 - 3325424 + r 72 -14.1 -2.59447 | overlap 3325384 CCCCTTCTCAGTGGT GCACCATCGCTGCACGC GCAT GGGCGCATCGATGGTGC GTCTTGTCCTTGCCA Rcas_2576 3326359 - 3325607 - | hypothetical protein Rcas_2577 3328063 - 3326375 - | von Willebrand factor type A Rcas_2578 3329424 - 3328180 - | hypothetical protein Rcas_2580 3330434 - 3331063 + | hypothetical protein TERM 2476 3331720 - 3331731 + T 74 -3.6 -4.73682 | overlap 3331704 CGAGCGCCTTGCGTG CGGG TGTT TCCG TTTTGTATTCTGAAG Rcas_2582 3333363 - 3332275 - | putative RNA methylase Rcas_2583 3334594 - 3333365 - | major facilitator transporter TERM 2477 3333955 - 3333929 - G 100 -18.8 -3.54424 | overlap 3333950 CGTGATGTTCGCAAA CGAGCGCTGCTG TCG CAGCAACGCTCG AACTTCCACGAAGGT TERM 2478 3336061 - 3336026 - g 100 -5.4 -5.41143 | gap 1, overlap 3336028 GACCGGGCAAAAAAA GCGCTGGCTGACGTTGC CGC GCAAC-TCAGCGACCTC AGCGCCGATCTCCAG TERM 2479 3337523 - 3337503 - g 83 -12.5 -3.90291 | overlap 3337504 AGGTCTCCAACGAAA CCGACGCGC AGC GCGCGTTGG AGCGCGCGCACGACG TERM 2480 3337538 - 3337504 - g 70 -12.8 -2.93853 | gap 1, overlap 3337503 GGTCTCCAACGAAAC CGACGCGCAGCGCGC GTTGGA GCGCGC-GCACGACG CTTACAGCAAAGCCG Rcas_2584 3335021 - 3337807 + | chromosome segregation ATPase-like protein TERM 2481 3337867 - 3337831 - T 93 -8 -4.88736 | opp_overlap 3337850 TAGGATGCACAAAAA CGAAATGCACCCCTCG ACATG CTCAGAGTGCATTTCG CCGTTTGTCCACAGG Rcas_2585 3338376 - 3337957 - | hypothetical protein TERM 2482 3338243 - 3338220 - G 100 -13.8 -4.46254 | overlap 3338221 TCAAGATATAAGAAA GCGCCCGCCT TGAG AGGCGGGCGA CATCTGCCCTGTGCG TERM 2483 3338242 - 3338221 - G 91 -17.3 -3.26668 | overlap 3338220 CAAGATATAAGAAAG CGCCCGCCT TGAG AGGCGGGCG ACATCTGCCCTGTGC TERM 2484 3338457 - 3338426 - R 78 -13.6 -3.1637 | ATACATCCCGAGCAA GGCGCGCCACGAAG GCTA CCGCGCAGCGCGCC TGACAATCGGGGGCG TERM 2485 3338594 - 3338584 - R 85 -2.4 -5.40474 | AGCGGTTGAAAAAAA GTCC ATC GGGC GGGAAAGGCGTCATC Rcas_2586 3340474 - 3338657 - | TrkA domain-containing protein TERM 2486 3338765 - 3338754 - G 87 -5.8 -5.1287 | opp_overlap 3338754, overlap 3338756 CCCACACGTAAAAAA TCGC CGGA GCGA TAATTACCCGGCCCC TERM 2487 3339312 - 3339300 - G 71 -4.7 -4.4891 | TGTAGGACGATAAAA CCGGG CTC CTCGG CCAATTGTTGAATAC TERM 2488 3339963 - 3339930 - G 72 -3.8 -4.61566 | CCCGAAACGAGAAAA TCGGCCATTGTCAA ACCGCG TTGACCTTGGGCGA TCAGATTTCCGCTGA TERM 2489 3340223 - 3340239 + g 79 -9.3 -4.15044 | opp_overlap 3340223 3340222 3340226 GAGGTGATGAGCAAC CCAGCGC ACG GCGCCGG TTTGTTCGAGGGCAG Rcas_2587 3340929 - 3340498 - | hypothetical protein Rcas_2588 3341463 - 3340945 - | hypothetical protein Rcas_2589 3342519 - 3341473 - | hypothetical protein TERM 2490 3342058 - 3342028 - G 82 -3.2 -5.1963 | GGTAATGAACAAAAA GCTCAACACGGTCA CGA TGAGCAAATCGAGC AATAAACCACCGGTA Rcas_2590 3344935 - 3342527 - | glucan 1,4-alpha-glucosidase TERM 2491 3344674 - 3344694 + g 77 -15.5 -2.66034 | overlap 3344665 3344665 CCGGCACACCTACGG CCAGCATCG TAA CGATGCTGG TGGTATGACGTTTCT Rcas_2591 3346044 - 3344932 - | alcohol dehydrogenase Rcas_2592 3347355 - 3346063 - | major facilitator transporter TERM 2492 3347255 - 3347237 - G 71 -9.5 -3.73953 | overlap 3347238 AGGATCGGCAGCAAA CCGGCGC TAACG GCGCCGA GTAGCGTATAAACGG Rcas_2593 3347732 - 3347556 - | hypothetical protein Rcas_2594 3348173 - 3348736 + | peptidase Rcas_2595 3349462 - 3348938 - | membrane protein-like protein TERM 2493 3349321 - 3349307 - G 77 -2.1 -5.10004 | AAAAATAACCAAAAA GAAAC CCATT GTTCC GACTCGCTCGGTGAT Rcas_2596 3350237 - 3349494 - | hypothetical protein TERM 2494 3349816 - 3349799 - G 72 -4.1 -4.61868 | TATCGAGACACAAAA CGGCAAT CTGA ATTCCCG ATAATCGTGAAAATG Rcas_2597 3350611 - 3350264 - | hypothetical protein Rcas_2598 3352020 - 3350611 - | integral membrane sensor signal transduction histidine kinase Rcas_2599 3352705 - 3352007 - | two component transcriptional regulator TERM 2495 3352908 - 3352868 - R 79 -12.8 -3.54902 | gap 1, opp_overlap 3352868, overlap 3352864 CTATCGAACAATTAA CCTCTGCACGAGGTCAC TGATAGGT ATGAC-TCGTGCAGAGG TTCGGTGAGCCACTC TERM 2496 3352868 - 3352908 + r 72 -12.1 -3.05596 | gap 1, opp_overlap 3352864 3352868 CTATCGAACAATTAA CCTCTGCACGAGGTCA CTGATAGGTA TGAC-TCGTGCAGAGG TTCGGTGAGCCACTC Rcas_2603 3356708 - 3356496 - | hypothetical protein TERM 2497 3356829 - 3356871 + r 73 -9.9 -3.59979 | overlap 3356830 3356832 ATGGTCACCCCGAGC AGC-GCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2498 3356830 - 3356870 + r 73 -13.4 -2.75844 | overlap 3356829 3356832 TGGTCACCCCGAGCA GC-GCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2499 3356832 - 3356867 + r 76 -14.8 -2.65354 | gap 1, overlap 3356830 3356829 GTCACCCCGAGCAGC GCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGC TGCGTTTACCCTGAG Rcas_2604 3363740 - 3357153 - | alpha-2-macroglobulin domain-containing protein TERM 2500 3358716 - 3358733 + g 75 -3.4 -4.82901 | gap 1 CAACTCCAGTTCGAC GCGCGCA TCGGC TGC-CGC TTTTTCTGGCGGCAG TERM 2501 3362505 - 3362489 - G 82 -3 -5.24129 | gap 1, overlap 3362493 CCGTCGGAGAAAAAA CGA-ACG TCGA CGTATCG ATCCAGCGCGCAACA TERM 2502 3363930 - 3363963 + r 76 -13.1 -3.33696 | gap 1, overlap 3363942 CGCGCCACGGGCGTT CGTTCATGGGCGCGCC TGA GGCGCGC-CACGGGCG TTCGTTCACGGGCGC TERM 2503 3363942 - 3363988 + r 89 -16.5 -3.39895 | gap 1, overlap 3363930 GTTCGTTCATGGGCG CGCCTGAGGCGCGCCACGGG CGTTCGTT CACG-GGCGCGCCACGGGCG TTCGTTCATGGGCGC TERM 2504 3363994 - 3364022 + r 80 -10.1 -4.00042 | overlap 3363997 3364003 GCCACGGGCGTTCGT TCATGGGCGCGCC TGA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2505 3363997 - 3364019 + r 83 -16.2 -3.05069 | overlap 3363994 3364003 ACGGGCGTTCGTTCA TGGGCGCGCC TGA GGCGCGCCCC TACTTATTTGATGGG TERM 2506 3364003 - 3364047 + r 95 -17.8 -3.39895 | overlap 3363997 3363994 GTTCGTTCATGGGCG CGCCTGAGGCGCGCCCCT ACTTATTTG ATGGGCGCGCCACGGGCG TTCGTTCATGGGCGC TERM 2507 3364078 - 3364106 + r 80 -10.1 -4.00042 | overlap 3364081 3364087 GCTACGGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2508 3364081 - 3364103 + r 83 -16.2 -3.05069 | overlap 3364078 3364087 ACGGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2509 3364162 - 3364190 + r 80 -10.1 -4.00042 | overlap 3364165 3364171 GCTACGGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2510 3364165 - 3364187 + r 83 -16.2 -3.05069 | overlap 3364162 3364171 ACGGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2511 3364221 - 3364249 + r 80 -10.1 -4.00042 | overlap 3364224 3364230 GCCACCGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2512 3364224 - 3364246 + r 83 -16.2 -3.05069 | overlap 3364221 3364230 ACCGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2513 3364280 - 3364308 + r 80 -10.1 -4.00042 | overlap 3364283 3364289 GCTACGGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2514 3364283 - 3364305 + r 83 -16.2 -3.05069 | overlap 3364280 3364289 ACGGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2515 3364389 - 3364417 + r 80 -10.1 -4.00042 | overlap 3364392 3364398 GCCACCGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2516 3364392 - 3364414 + r 83 -16.2 -3.05069 | overlap 3364389 3364398 ACCGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2517 3364448 - 3364476 + r 80 -10.1 -4.00042 | overlap 3364451 3364457 GCTACGGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2518 3364451 - 3364473 + r 83 -16.2 -3.05069 | overlap 3364448 3364457 ACGGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTATTTGATGGG TERM 2519 3364457 - 3364501 + r 95 -18.6 -3.39895 | overlap 3364451 3364448 3364483 3364485 GTTCGTTCATGGGCG CGCCTCAGGCGCGCCCCT ACTTATTTG ATGGGCGCGCCTCAGGCG TTCGTTCATGGGCGC TERM 2520 3364483 - 3364535 + r 100 -19.2 -4.00042 | gap 1, overlap 3364457 3364485 3364516 CGCCCCTACTTATTT G-ATGGGCGCGCCTCAGGCGTTC GTTCATGG GCGCGCCTGAGGCGCGCCCCTAC TTATTTGATGGGCGC TERM 2521 3364485 - 3364532 + r 100 -22 -3.05069 | overlap 3364457 3364483 3364516 CCCCTACTTATTTGA TGGGCGCGCCTCAGGCGTTC GTTCATGG GCGCGCCTGAGGCGCGCCCC TACTTATTTGATGGG TERM 2522 3364516 - 3364560 + r 89 -15.6 -3.39895 | overlap 3364485 3364483 GTTCGTTCATGGGCG CGCCTGAGGCGCGCCCCT ACTTATTTG ATGGGCGCGCCACCGGCG TTCGTTCATGGGCGC TERM 2523 3364566 - 3364594 + r 70 -10.1 -3.44229 | overlap 3364569 GCCACCGGCGTTCGT TCATGGGCGCGCC TCA GGCGCGCCCCTAC TTGTCATGGTGCGCT TERM 2524 3364569 - 3364591 + r 81 -16.2 -2.87243 | overlap 3364566 ACCGGCGTTCGTTCA TGGGCGCGCC TCA GGCGCGCCCC TACTTGTCATGGTGC Rcas_2605 3367159 - 3364598 - | 1A family penicillin-binding protein TERM 2525 3365112 - 3365079 - G 88 -16.8 -3.28712 | gap 1 CGTGTCTGCGGATAA TCG-TCCGGCGCGCG GCATT CACGCGCCGGATCGA CGCGCACCATCACGT TERM 2526 3365349 - 3365363 + g 73 -11.4 -3.59979 | CTGACTGCTTCCATC CGCCGA CCA TCGGCG TTTCCGATCCACACG TERM 2527 3366268 - 3366295 + g 70 -9.8 -3.61398 | gap 1, overlap 3366268 GCCCGCCGCGCGCCA C-GGCGTCGGGAC CGA GTTCCGCCGCCAG TTGTTCCAGAACGAA TERM 2528 3366332 - 3366320 - G 74 -4.7 -4.59653 | opp_overlap 3366321, overlap 3366321 AACGAAAAAGACAAA GTGCG GCG CGCGC GGCAGGCATCCCGGC TERM 2529 3367135 - 3367125 - G 78 -3.2 -5.00616 | GTCTCGCGGAAAAAA CGAC CCA ATCG CTTTCCATCGGACCA Rcas_2606 3367301 - 3368134 + | metallophosphoesterase Rcas_2607 3369013 - 3368213 - | hypothetical protein Rcas_2608 3369868 - 3369062 - | hypothetical protein Rcas_2609 3369926 - 3370192 + | hypothetical protein Rcas_2610 3370208 - 3370639 + | TPR repeat-containing protein TERM 2530 3370940 - 3370966 + G 71 -11.5 -3.51976 | overlap 3370936 3370947 GGCAATCTTTGTGCT GGGGACGGCGC TGTGC GCGCTTTCCCC TTCATTTACCACCTT TERM 2531 3371296 - 3371322 + G 70 -11.6 -3.14602 | gap 1, opp_overlap 3371266, overlap 3371292 3371298 ACTGGCGGGCGCTGC GC-GCGCCAGG TCCACT CCTGGCGCTGC TGTTCGTGGCATCGA Rcas_2611 3370641 - 3371843 + | major facilitator transporter Rcas_2612 3372312 - 3372019 - | hypothetical protein TERM 2532 3372868 - 3372883 + G 80 -4.6 -4.95758 | GGATACTATCGCAAT CCCTGG TCGT CCACGG TTTTTCTGCTGTGAT Rcas_2613 3372575 - 3372961 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2533 3373213 - 3373203 - g 77 -2.4 -5.05782 | overlap 3373204 3373205 ACCGACTGGAAAAAA CTGG TCG CCCG CGACGACATCGGGCT Rcas_2614 3372999 - 3374162 + | oxidoreductase domain-containing protein TERM 2534 3374354 - 3374379 + F 72 -13.2 -2.52464 | GGCGGGGCGCAGACC CGCCCCCGCG CCAGAC CGAGGGGGCG TCCCTTCCCGCGACG TERM 2535 3374411 - 3374436 + F 72 -13.2 -2.52464 | GGCGGGGCGCAGACC CGCCCCCGCG CCAGAC CGAGGGGGCG TCCCTTCCCGCGACG TERM 2536 3374499 - 3374481 - f 93 -16 -3.65812 | CCCGCCCCAACAGAA GGCGGGTC TCA GACCCGCC CCAACAGGAGAAAAA Rcas_2615 3374519 - 3375517 + | xylose isomerase domain-containing protein Rcas_2616 3375539 - 3376315 + | short-chain dehydrogenase/reductase SDR Rcas_2617 3376414 - 3376836 + | hypothetical protein TERM 2537 3377011 - 3376968 - f 90 -14.6 -3.59979 | gap 1, overlap 3376969 3376972 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGCTCTG CGCGGGGTGACCATG TERM 2538 3377009 - 3376969 - f 79 -15.6 -2.75844 | overlap 3376968 3376972 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGCT-C TGCGCGGGGTGACCA TERM 2539 3377007 - 3376972 - f 85 -18.4 -2.65354 | gap 1, overlap 3376969 3376968 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC TCTGCGCGGGGTGAC TERM 2540 3377641 - 3377625 - g 74 -5.7 -4.42238 | overlap 3377633 GCACTCGAACCAAAA CCGAACG AGC CGCGCGG CGACATCTACCTGGC Rcas_2618 3377070 - 3378239 + | xylose isomerase TERM 2541 3378269 - 3378299 + F 100 -16.2 -4.62471 | overlap 3378270 AACGATTTTTTCATT TCGAAGCGCGCTGT AAC GCAGCGCGCTTTGG TTTTTAAGGCTTGCG TERM 2542 3378270 - 3378298 + F 93 -17.5 -3.37 | overlap 3378269 ACGATTTTTTCATTT CGAAGCGCGCTGT AAC GCAGCGCGCTTTG GTTTTTAAGGCTTGC TERM 2543 3378636 - 3378673 + G 71 -5.5 -4.32857 | gap 1, opp_overlap 3378614 3378636 CTCTGGCGCAGAGCA CTCCCGAAGCACCGCAGC CGG GC-GATGTGTTTCGTGAG TTTGTATTTCCGCAG TERM 2544 3380452 - 3380484 + G 71 -5.4 -4.49556 | gap 1, opp_overlap 3380453, overlap 3380453 CCTGCTGCTCGAACC ATCGGCGCGGCTGCG GTTC CGCC-CGGCGCCGAA TTTCTTTGGTCAGGC TERM 2545 3380630 - 3380598 - g 74 -14.9 -2.62616 | overlap 3380586 CCAGCGCCTACAGCA GCGTCACGGCAACTG CGA CGGTTACCGTGACAC CGGTTAACGATCCGC TERM 2546 3381208 - 3381178 - g 75 -13.4 -3.07013 | gap 1, overlap 3381158 3381199 CACCCGCGCAACACA GGTTGTGCGGGTC GTCAAT GACCCGC-CAACC GTGCGGGTGAACGCC Rcas_2619 3378521 - 3381517 + | PKD domain-containing protein Rcas_2620 3381596 - 3383116 + | xylulokinase Rcas_2621 3383217 - 3383927 + | hypothetical protein Rcas_2622 3385211 - 3384060 - | hypothetical protein TERM 2547 3385694 - 3385732 + G 87 -17.5 -2.87136 | gap 1, opp_overlap 3385692 3385691 TGTCGGCTACAATGT TCGCGCAGCGC-TCGATG CCCG CAACGGCGCGCTGCGCGA TGTCATCATTCGTCC Rcas_2623 3385437 - 3386114 + | hypothetical protein Rcas_2624 3386346 - 3386122 - | hypothetical protein TERM 2548 3386394 - 3386381 - H 71 -5.3 -4.36914 | TCCGGTGCGACAAAA CTATG GTAC CATAG TTCGAGAGGCATTGC Rcas_2625 3386451 - 3386855 + | endoribonuclease L-PSP Rcas_2626 3387442 - 3386843 - | ThiJ/PfpI domain-containing protein Rcas_2627 3389007 - 3387496 - | MlrC domain-containing protein Rcas_2628 3390314 - 3389004 - | aminotransferase class-III Rcas_2629 3391120 - 3390497 - | hypothetical protein Rcas_2630 3392439 - 3391861 - | hypothetical protein Rcas_2631 3393195 - 3392752 - | cytochrome c class I TERM 2549 3392847 - 3392872 + g 75 -3.9 -4.67982 | overlap 3392850 CGATCTGCCCCTGAC CACCGCTGC GAATCCAG GCGGCGATG TTTTCTTCGGTGCGC Rcas_2632 3393771 - 3393310 - | hypothetical protein TERM 2550 3393536 - 3393520 - G 79 -10.8 -3.96216 | opp_overlap 3393516 TGCGCAGGTAAACAA CGGCGC CTGAC GCGCCG AGGATCGGTTCAGAA Rcas_2633 3395751 - 3393910 - | copper resistance protein CopC TERM 2551 3394692 - 3394669 - G 71 -6.1 -4.30978 | gap 1 CGCAAGCCATGAAAA GCGGATGAGT GAGCG ACTCATC-GC CTGTGGATCGGGCGC TERM 2552 3395691 - 3395673 - G 75 -14.6 -2.74012 | opp_overlap 3395689 3395690, overlap 3395655 TCAGCAGTGCAATCA CGCCGATC ACG GATCGGCG CAGTGCGGCGCAGGC TERM 2553 3395966 - 3395992 + r 80 -14.4 -3.02263 | opp_overlap 3395946 3395945, overlap 3395952 3395950 ACCGGCGCCGTGCTC GCGGCGCTCCCA CCG TGGGAGTGCCGG TCTTCGCGCAGGTAT Rcas_2634 3396666 - 3396145 - | copper resistance protein CopC TERM 2554 3396735 - 3396780 + r 88 -14.2 -3.59979 | gap 3, overlap 3396730 3396739 3396741 GGCATGGTCACCCCG CGCAGCGCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCG--CTGCG TTTACCCTGAGCGAA TERM 2555 3396739 - 3396779 + r 84 -17 -2.75844 | overlap 3396730 3396735 3396741 TGGTCACCCCGCGCA GC-GCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2556 3396741 - 3396776 + r 85 -18.4 -2.65354 | gap 1, overlap 3396730 3396739 3396735 GTCACCCCGCGCAGC GCGAGGGGTCTTGCGCG ACC CGCGC-AGATTCCTCGC TGCGTTTACCCTGAG Rcas_2635 3397479 - 3396991 - | hypothetical protein TERM 2557 3397363 - 3397314 - G 78 -10 -3.97674 | gap 1, opp_overlap 3397318 3397347 3397348, overlap 3397316 3397317 3397345 CGATGATGGAAACAA GAGCCAGCAGAGCACGGGCGCCT GCCAT ACACGCCCGTGCTCTGCCGT-TG TGAGGGCAGAGCGCA TERM 2558 3397362 - 3397316 - G 86 -15.1 -3.57587 | opp_overlap 3397318 3397347 3397348, overlap 3397314 3397317 3397345 ATGATGGAAACAAGA GCCAGCAGAGCACGGGCGCCT GCCAT ACACGCCCGTGCTCTGCCGTT GTGAGGGCAGAGCGC TERM 2559 3397361 - 3397317 - G 87 -18.6 -2.73829 | opp_overlap 3397318 3397347 3397348, overlap 3397316 3397314 3397345 TGATGGAAACAAGAG CCAGCAGAGCACGGGCGCCT GCCAT ACACGCCCGTGCTCTGCCGT TGTGAGGGCAGAGCG TERM 2560 3397318 - 3397360 + g 93 -18.4 -3.28712 | opp_overlap 3397317 3397316 3397314 3397345, overlap 3397347 3397348 GATGGAAACAAGAGC CAGCAGAGCACGGGCGCCTG CCA TACACGCCCGTGCTCTGCCG TTGTGAGGGCAGAGC TERM 2561 3397570 - 3397558 - R 76 -10.5 -3.82946 | TCACCGCAAATACAA GCCCC GCT GGGGC TGCTGATGCCGAGGC Rcas_2636 3398456 - 3397746 - | ferric reductase domain-containing protein Rcas_2637 3399110 - 3398475 - | hypothetical protein TERM 2562 3398784 - 3398794 + g 79 -8.2 -4.37658 | opp_overlap 3398746, overlap 3398767 3398783 CTCGCACGGTCGCGT CGCG TAG CGCG TTTTCTGCACCCGTT Rcas_2638 3400405 - 3399542 - | rhamnulose-1-phosphate aldolase TERM 2563 3401793 - 3401805 + G 71 -6.2 -4.38154 | opp_overlap 3401802, overlap 3401792 CTGAAGCCGCTCATC GCGC CAAGA GCGC TTTTCTGGCGCATAT TERM 2564 3402151 - 3402173 + G 82 -11.4 -4.09685 | opp_overlap 3402145 3402151 GAGCGACAAGACGAA GATTCGACAG GTG CTGTTGAATC TTTTGAGCAATGCCG Rcas_2639 3400646 - 3402571 + | multi-sensor signal transduction histidine kinase Rcas_2641 3403522 - 3405582 + | oligopeptidase B TERM 2565 3405764 - 3405733 - T 76 -12.4 -3.32343 | gap 1, opp_overlap 3405733 3405735 3405735 3405738 3405742, overlap 3405738 TTTACAGGGGTATAA GATAAGAGACGGTGC AGT GCACCGTCTCC-ACC TTTGACGTTGCACTG TERM 2566 3405735 - 3405791 + T 75 -13.8 -2.87051 | opp_overlap 3405733 3405738, overlap 3405733 3405735 3405738 3405742 TACAGGGGTATAAGA TAAGAGACGGTGCAGTGCACCGTC TCCACCTTT GACGTTGCACTGCAACGTCTCTCC ATTTACTGCTGGACG TERM 2567 3405735 - 3405792 + T 85 -12.2 -3.78775 | gap 1, opp_overlap 3405733 3405738, overlap 3405733 3405735 3405738 3405742 TACAGGGGTATAAGA T-AAGAGACGGTGCAGTGCACCGTC TCCACCTTT GACGTTGCACTGCAACGTCTCTCCA TTTACTGCTGGACGC TERM 2568 3405788 - 3405738 - T 100 -19.9 -3.75378 | opp_overlap 3405733 3405738 3405735 3405735 3405742, overlap 3405733 AGGGGTATAAGATAA GAGACGGTGCAGTGCACCGTC TCCACCTTT GACGTTGCACTGCAACGTCTC TCCATTTACTGCTGG TERM 2569 3405738 - 3405788 + T 95 -19.9 -2.68775 | opp_overlap 3405733 3405738, overlap 3405733 3405735 3405735 3405742 AGGGGTATAAGATAA GAGACGGTGCAGTGCACCGTC TCCACCTTT GACGTTGCACTGCAACGTCTC TCCATTTACTGCTGG TERM 2570 3405742 - 3405784 + T 76 -13.5 -2.98802 | opp_overlap 3405733 3405738, overlap 3405733 3405738 3405735 3405735 GTATAAGATAAGAGA CGGTGCAGTGCACCGTC TCCACCTTT GACGTTGCACTGCAACG TCTCTCCATTTACTG Rcas_2642 3406516 - 3405794 - | hypothetical protein Rcas_2643 3406755 - 3407165 + | hypothetical protein TERM 2571 3409116 - 3409092 - g 76 -7.7 -4.36554 | overlap 3409093 GATCATCACAACAAA GCAGCCGACGG TCC CCGCCGCCTGG CAGTCTACCTGAGCG Rcas_2644 3407373 - 3409874 + | Beta-mannosidase Rcas_2645 3411434 - 3409884 - | 4-alpha-glucanotransferase TERM 2572 3410965 - 3410977 + g 74 -4.7 -4.56597 | opp_overlap 3410963, overlap 3410964 3410966 GATGACCAGGAACCG CCGCC ATT GGCGC TTTTTAAGGCAGCGA TERM 2573 3411096 - 3411081 - G 74 -11.8 -3.53761 | opp_overlap 3411093 GAACCCCTGCTGAAA GCGCGC GAAG GCGCGC CGAAGCATGCGCTGC Rcas_2646 3412055 - 3411624 - | hypothetical protein Rcas_2647 3413948 - 3412374 - | major facilitator transporter Rcas_2648 3415142 - 3415453 + | hypothetical protein Rcas_2649 3415716 - 3416363 + | hypothetical protein Rcas_2650 3416443 - 3417504 + | hypothetical protein Rcas_2651 3417501 - 3417740 + | hypothetical protein Rcas_2652 3417756 - 3419069 + | hypothetical protein Rcas_2653 3420861 - 3419143 - | response regulator receiver/SARP domain-containing protein TERM 2574 3419350 - 3419367 + g 76 -6.3 -4.46615 | CCGCTGGCTGAGCAT GATTGCC ATAG GGTAATC TTTTCGTTCCTGATA TERM 2575 3420066 - 3420081 + g 70 -10.4 -3.67597 | opp_overlap 3420062 CATTCACAGCATGCT CCGCCT TTGC AGGCGG TTCTTCAATCAGGAG TERM 2576 3420194 - 3420182 - G 80 -5.5 -4.69053 | CACCAGGCAAGAAAA CGCTG CAA CAACG ACGGCGAGTGATCGG Rcas_2654 3422588 - 3421599 - | UDP-glucose 4-epimerase TERM 2577 3422818 - 3422773 - H 77 -11.2 -3.59979 | gap 3, overlap 3422774 3422777 TTCGCTCAGGGTAAA CGCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 2578 3422817 - 3422774 - H 77 -14.7 -2.75844 | gap 3, overlap 3422773 3422777 TCGCTCAGGGTAAAC GCAGCGCG-GAA-TCG-GCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 2579 3422812 - 3422777 - H 78 -15.4 -2.65354 | gap 1, overlap 3422774 3422773 CTCAGGGTAAACGCA GCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_2655 3423305 - 3423736 + | hypothetical protein Rcas_2656 3425095 - 3423728 - | hypothetical protein Rcas_2657 3425402 - 3426331 + | cysteine synthase A TERM 2580 3426372 - 3426388 + F 71 -5.8 -4.39571 | opp_overlap 3426371 AGCCGCCTCACGAAC GAGTCG CTCGA CGGCTC TTTTGCCTTTGTAGC TERM 2581 3426803 - 3426749 - g 77 -14.4 -2.87132 | opp_overlap 3426749 3426750 CGGTCTCCCGACAGA CTGATGAGCGTGGTGATCCGCTCA ACACCTA TGAGCAGATCACCACGTACAACAA TTTCTATGAATTCAC TERM 2582 3426749 - 3426803 + G 83 -12.2 -4.09108 | opp_overlap 3426749, overlap 3426750 CGGTCTCCCGACAGA CTGATGAGCGTGGTGATCCGCTCA ACACCTA TGAGCAGATCACCACGTACAACAA TTTCTATGAATTCAC TERM 2583 3426750 - 3426802 + G 81 -15.7 -3.04983 | opp_overlap 3426749, overlap 3426749 GGTCTCCCGACAGAC TGATGAGCGTGGTGATCCGCTCA ACACCTA TGAGCAGATCACCACGTACAACA ATTTCTATGAATTCA Rcas_2658 3426580 - 3427515 + | putative sulfite oxidase subunit YedY TERM 2584 3427544 - 3427524 - f 100 -13.9 -4.88407 | CTATTGAACCAAAAA GGGCGCGTC AGC GGCGCGCCC GCAAATGGCGCTCTG TERM 2585 3427570 - 3427550 - f 74 -11.9 -3.53012 | overlap 3427566 3427567 CGGCGCGCCCGCAAA TGGCGCTCT GGA AGAACGCCA CCCTTGAAGTGTGCG TERM 2586 3428465 - 3428477 + G 74 -4.7 -4.58786 | TGGTCAGCGCGATTG CCGTC GGT GTCGG TTTGTTCTTCTTCGT TERM 2587 3429630 - 3429601 - g 73 -12.9 -3.18912 | gap 1 GCACTGACTGATGAA GTGCTCTTCGCGCG CGT CGCGCCA-GAGCAC AAACTGCGCGTCGTC TERM 2588 3429663 - 3429634 - g 70 -7.2 -4.0162 | gap 2 GCGCCAGAGCACAAA CTGCGCGTCGTCAG CGCG CTG-CG-CGCACAG GGGCATGTCGTCGCT Rcas_2659 3427714 - 3430518 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Rcas_2660 3430542 - 3431186 + | TrkA domain-containing protein Rcas_2661 3431191 - 3431853 + | TrkA domain-containing protein TERM 2589 3432142 - 3432103 - f 72 -12.1 -3.10715 | opp_overlap 3432095 CCGATCACGACCGAA CCATGGCGACGC-CGCCGG TATG CCGGCGAGCGCCG-CGCGG TCCTGACCTGATTCA TERM 2590 3432651 - 3432688 + GF 72 -12.7 -2.98942 | gap 1 TTGACCGCCTCGCTC CAGGTGATCG-GTCGCGG CGC CCACGACACGGTCACCGG TCTCTATGCGGCGGT Rcas_2663 3432333 - 3434471 + | multi-sensor signal transduction histidine kinase Rcas_2664 3434437 - 3434880 + | response regulator receiver protein TERM 2591 3435617 - 3435600 - g 71 -8.4 -3.83502 | opp_overlap 3435612 GAGTGCGACATCAAA GCCGTC GTTCAG GACGGC GCACCTGCCGCCATT TERM 2592 3436230 - 3436247 + G 71 -8.3 -3.90744 | opp_overlap 3436223 3436221 GATGAAGAGACGCGC CGGCGCG CCTT CGAGCCG TTCTTTACCACGAAG Rcas_2665 3434895 - 3436808 + | PAS/PAC sensor hybrid histidine kinase Rcas_2666 3437135 - 3438253 + | ABC-type sugar transport system periplasmic component-like protein TERM 2593 3438363 - 3438337 - g 75 -12.2 -3.55563 | ATGCTAGCCTGGAAA TCAGCGCCGGTG AGA CGCTGGCGCTGA TCGGAGCGAACGGCA Rcas_2667 3438258 - 3439775 + | ABC transporter related TERM 2594 3440641 - 3440662 + G 79 -10.9 -3.93963 | gap 1, overlap 3440651 CATCTCGTTTGCCAA CGTC-GCCAC CTG GTGGCAGACG TTTGTGAATGCTGCT Rcas_2668 3439772 - 3440740 + | monosaccharide-transporting ATPase TERM 2595 3441410 - 3441425 + G 74 -4.6 -4.58466 | overlap 3441411 CGATCTCCGGAATGC TCGCCG GTCT TGGCGG TTTTCTGGTTGTCGG TERM 2596 3441653 - 3441667 + G 76 -10 -3.87815 | TCGGCGCTACCCTGC TGGCGA TGA TCGCCA TTTATGGACGTCAGC Rcas_2669 3440737 - 3441699 + | inner-membrane translocator Rcas_2670 3441820 - 3443862 + | hypothetical protein TERM 2597 3446005 - 3446029 + G 72 -12.1 -3.3095 | CCTACTCGTGGCGCT TTGCCGACGGT CGC ACCGGCGGCGA TTATCAGCAGTATCT Rcas_2671 3443934 - 3446312 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Rcas_2672 3446331 - 3447101 + | hypothetical protein TERM 2598 3447379 - 3447399 + F 90 -19.7 -3.05384 | GAGCGGGGCTAGTTG GGGCGGGGC GCA GCCCCGCCC TTCCGTGGGGCGGGA TERM 2599 3447808 - 3447845 + F 88 -2.7 -5.55855 | gap 1, overlap 3447830 ACCGAGGAGCACAGC GCCCGCGCCATGTG TTTCAATCCCC TTCATGGCG-GGGC TTTTGTTTTTTTACC TERM 2600 3450482 - 3450500 + F 82 -13.1 -3.66874 | opp_overlap 3450472 GGAAGCGGAACTCCG CGCGCGG AAGCG CCGCGCG TTTCAATCCCCTTCA TERM 2601 3450621 - 3450648 + F 77 -11.3 -3.66874 | overlap 3450623 TTTTTCGGCGCCATG TGCGCCAGCTC GAAGTG GAGCTGGCGTG TTTCAATCCCCTTCA TERM 2602 3450623 - 3450646 + F 81 -13.9 -3.41341 | overlap 3450621 TTTCGGCGCCATGTG CGCCAGCTC GAAGTG GAGCTGGCG TGTTTCAATCCCCTT TERM 2603 3450928 - 3450947 + F 73 -9.3 -3.96483 | TCGCCGCATTCCTGG CGAGACG ATGGAA CGTCTCG TTGTTTCAATCCCCT TERM 2604 3451374 - 3451421 + F 88 -3.3 -5.55855 | gap 2, overlap 3451377 3451406 TTTCTGGTCTCGGCG GCTCCGCTCCTGGGGGAGGAGCG GTTT CAATCC-CCTTCATG-GCGGGGC TTTTGTTTTTTTGCG TERM 2605 3451377 - 3451397 + F 82 -12.6 -3.66874 | overlap 3451374 CTGGTCTCGGCGGCT CCGCTCCT GGGGG AGGAGCGG TTTCAATCCCCTTCA TERM 2606 3452030 - 3452061 + F 76 -15.2 -2.66272 | gap 1, overlap 3452027 3452028 3452046 CTTTTGTTTTTTTCC GCTTCCGCTTCCTCC CGA GGAGGAAGCGGC-GC TCCGTTTCAATCCCC TERM 2607 3452191 - 3452216 + F 77 -11.1 -3.66874 | gap 1, opp_overlap 3452190 3452187 3452186, overlap 3452192 TCGCTCGAAACGGAG GCGGCCTGG-GC GGC GCACCAGGCCGG TTTCAATCCCCTTCA TERM 2608 3452192 - 3452215 + F 77 -14.6 -2.79803 | gap 1, opp_overlap 3452190 3452187 3452186, overlap 3452191 CGCTCGAAACGGAGG CGGCCTGG-GC GGC GCACCAGGCCG GTTTCAATCCCCTTC TERM 2609 3452476 - 3452513 + F 93 -16.3 -3.66874 | GCTTTTGTTTTTTTC CATTCCTTCCCTCTCCC GAAT GGGAGAGGGAAGGCGCG TTTCAATCCCCTTCA TERM 2610 3453137 - 3453152 + F 70 -3.2 -4.67635 | CTCGATGCTCCTGAC CGGC TTGCCTGC GCCG TTTTGTGATTTTGGC TERM 2611 3453691 - 3453669 - g 70 -11.9 -3.20348 | overlap 3453664 CGGAGGAAGAGGGAA CGGCGCCGG TTGCG CCGCCGCCG CTGGCATTGCGCGCA Rcas_2673 3453182 - 3455278 + | hypothetical protein TERM 2612 3455434 - 3455445 + T 78 -7.2 -4.62984 | opp_overlap 3455395, overlap 3455425 3455422 TCAGCCCGCGCCGAG GCGC CTTT GCGC TTTTGTGTGTGCTCA Rcas_2674 3455753 - 3455478 - | CRISPR-associated Cas2 family protein Rcas_2675 3458266 - 3455933 - | von Willebrand factor type A TERM 2613 3456679 - 3456692 + g 74 -9.5 -3.85698 | opp_overlap 3456661 GCAACGTCAGGGCAA CCCCG ATGC CGGGG TTTGTCCAGCCGACC TERM 2614 3457701 - 3457677 - G 75 -12.1 -3.5393 | ATCACGTGGTCGAAA CTGACGACGCC AAT GCCGTCGCCAG CCTGCATAAGATCGA Rcas_2676 3459385 - 3458387 - | CRISPR-associated Cas1 family protein TERM 2615 3459088 - 3459061 - G 71 -11.2 -3.44051 | opp_overlap 3459056 GCTTGACGATCACAA TCGCGCGCGCCA GTTC CAGCGCGCGTGA AGGAGTGTTGACGTA Rcas_2677 3461067 - 3459724 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 2616 3459901 - 3459911 + g 71 -4.6 -4.4017 | CCCATTGGCGTAGGA TGCG ATG CGCG TTTTCTCGGCGTTCA Rcas_2678 3462543 - 3461083 - | hypothetical protein TERM 2617 3461861 - 3461886 + g 80 -14.7 -3.13475 | overlap 3461862 TCGTCGATCTGCGCC GCTGCGACCGT CGCC GCGGTCGCGGC TTCGATCTGCCGTTC Rcas_2679 3463007 - 3462558 - | hypothetical protein Rcas_2680 3463192 - 3463004 - | hypothetical protein TERM 2618 3463463 - 3463496 + r 83 -16.9 -2.66733 | gap 1, opp_overlap 3463457 3463472, overlap 3463470 3463472 GGCGTCAAACGTTTC CGG-CAGAGACGTTGC GGT GCAACGTCTCTGATCG TCATATGGGTTCAGG TERM 2619 3463470 - 3463488 + r 75 -13.2 -2.84192 | opp_overlap 3463457 3463472, overlap 3463463 3463472 AACGTTTCCGGCAGA GACGTTGC GGT GCAACGTC TCTGATCGTCATATG Rcas_2681 3464346 - 3463969 - | hypothetical protein TERM 2620 3464281 - 3464256 - G 70 -11.9 -3.14564 | gap 1 CGATCTGCGCATCAA TGGCGCGA-ACC TCG GGCGTCGCGCCA ACGAACGTGGCGATC Rcas_2682 3465086 - 3464343 - | hypothetical protein TERM 2621 3464920 - 3464906 - G 83 -7.8 -4.63928 | overlap 3464897 AGAGCAGCGGAAAAA TCAGCG CAG CGCCGA GAATGATGCCGATCA Rcas_2683 3466129 - 3465083 - | transcriptional regulator-like protein Rcas_2684 3467688 - 3466291 - | CRISPR-associated TIGR02710 family TERM 2622 3467550 - 3467530 - G 81 -6.7 -4.7254 | overlap 3467532 ATCGGTGAGCAAAAA CGCTACCCG CTC CGGGTTGAG ACCGGCGATCAATAA Rcas_2685 3468467 - 3467895 - | CMP/dCMP deaminase zinc-binding Rcas_2686 3469717 - 3470457 + | methyltransferase type 12 Rcas_2687 3471210 - 3470461 - | hypothetical protein TERM 2623 3470566 - 3470554 - G 70 -10.5 -3.54424 | overlap 3470508 GGCGATGCGGCGAAA GCGCG CAG CGCGC AGCGCCAGCGGACCT TERM 2624 3471133 - 3471111 - G 89 -17 -3.20164 | CTACACGCAACGGAA CGCCTGCGGC GGC GCCACAGGCG GGGCACCGCGACGGC Rcas_2688 3472370 - 3471207 - | glycosyl transferase group 1 Rcas_2689 3473360 - 3472416 - | anti-sigma-factor antagonist TERM 2625 3472654 - 3472628 - G 71 -11.5 -3.44206 | gap 1, overlap 3472631 CAATATCGAGGATAA CCAGTCGCGCGC GCTG GCGCGCGGC-GG TCTCCAGCAACCGTT TERM 2626 3472652 - 3472631 - G 70 -12.9 -2.86747 | overlap 3472628 TATCGAGGATAACCA GTCGCGCGC GCTG GCGCGCGGC GGTCTCCAGCAACCG TERM 2627 3474744 - 3474762 + G 86 -16 -3.13403 | overlap 3474742 CCGCGCGCGCCGGAG GCGCTGCG TCG CGCAGCGC TGTTGCTCGACCGGC Rcas_2690 3473526 - 3475928 + | lytic transglycosylase catalytic Rcas_2691 3476210 - 3475929 - | hypothetical protein Rcas_2692 3477121 - 3476267 - | xylose isomerase domain-containing protein Rcas_2693 3478511 - 3477246 - | glycosyl transferase group 1 Rcas_2694 3479672 - 3478839 - | hypothetical protein TERM 2628 3479586 - 3479609 + g 85 -14.6 -3.62597 | gap 1 CCGGCGAGCTTCGTG CTGCGCGC-GC ACC GCAGCGCGCAG TTGTTCGAGGATGGC Rcas_2695 3480235 - 3479669 - | hypothetical protein TERM 2629 3480256 - 3480298 + r 90 -14.9 -3.59979 | overlap 3480257 3480259 ATTGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2630 3480257 - 3480297 + r 86 -18.4 -2.75844 | overlap 3480256 3480259 TTGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2631 3480259 - 3480294 + r 88 -19.8 -2.65354 | gap 1, overlap 3480257 3480256 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG TERM 2632 3480557 - 3480600 + r 90 -14.6 -3.59979 | gap 1, opp_overlap 3480561, overlap 3480561 CATGGTCACCCCGAG CAAAGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2633 3480561 - 3480596 + r 85 -18.4 -2.65354 | gap 1, opp_overlap 3480561, overlap 3480557 GTCACCCCGAGCAAA GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG TERM 2634 3480596 - 3480561 - R 91 -14 -3.73775 | gap 1, opp_overlap 3480557 3480561 GTCACCCCGAGCAAA GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_2696 3482694 - 3480715 - | ABC transporter related TERM 2635 3481372 - 3481354 - G 76 -8.1 -4.22009 | gap 1 ACCACTGAAGAGAAA GCGC-CCC AGCA GGGTGCGC GCTTCGGTCTCTTTG TERM 2636 3483179 - 3483226 + G 73 -12.6 -3.21218 | gap 1, overlap 3483211 GCCGAGGAGCGCGAT CAGGTGCGCGCTGCCCTGGCGAC CAT GCCGCAGCGCCAG-GCGCACCTG TTGCTGCTGCGCCAT TERM 2637 3483314 - 3483328 + G 76 -8.5 -4.17132 | GGCACACTCCTCGCC CGCGC CGAAC GCGCG TTTGTTGCGGCATTT Rcas_2697 3482768 - 3483403 + | ECF subfamily RNA polymerase sigma-24 factor Rcas_2698 3483400 - 3484545 + | putative transmembrane anti-sigma factor TERM 2638 3484746 - 3484788 + F 88 -13.5 -3.59979 | overlap 3484747 3484749 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2639 3484747 - 3484787 + F 84 -17 -2.75844 | overlap 3484746 3484749 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2640 3484749 - 3484784 + F 85 -18.4 -2.65354 | gap 1, overlap 3484747 3484746 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG TERM 2641 3485137 - 3485164 + G 83 -9.1 -4.36914 | TGGGCTTCGCCCCAG CCGATCCTCGC GCGATG GCGCGGATTGG TTTTCTGCCAGAGCA Rcas_2699 3484929 - 3485861 + | ABC transporter related Rcas_2700 3486120 - 3487028 + | 3-hydroxyisobutyrate dehydrogenase TERM 2642 3487893 - 3487911 + G 84 -4.5 -5.1523 | gap 1 GCACGCATGTGCGGA CGGTGACG TATA CG-CGCCG TTTTTATGTTCTGCA Rcas_2701 3487025 - 3487939 + | GCN5-related N-acetyltransferase Rcas_2702 3487946 - 3488458 + | hypothetical protein Rcas_2703 3491197 - 3488597 - | primosomal protein N' TERM 2643 3491265 - 3491237 - R 95 -13.2 -4.07568 | gap 2, overlap 3491238 3491241 CGGCGCCGTGCAAAA GGCAGGGGCGGGTC TGA GACCCGCCCC--CC GTGGGATTCGCCCCC TERM 2644 3491265 - 3491238 - R 83 -15.6 -3.04398 | gap 1, overlap 3491237 3491241 GGCGCCGTGCAAAAG GCAGGGGCGGGTC TGA GACCCGCCCCC-C GTGGGATTCGCCCCC TERM 2645 3491263 - 3491241 - R 95 -20.6 -2.74605 | overlap 3491237 3491238 GCCGTGCAAAAGGCA GGGGCGGGTC TGA GACCCGCCCC CCGTGGGATTCGCCC TERM 2646 3491328 - 3491300 - R 100 -13.2 -4.82901 | gap 2, opp_overlap 3491324, overlap 3491301 3491304 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGTCCCC TERM 2647 3491328 - 3491301 - R 93 -15.6 -3.49419 | gap 1, opp_overlap 3491324, overlap 3491300 3491304 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGTCCCC TERM 2648 3491326 - 3491304 - R 95 -20.6 -2.88667 | opp_overlap 3491324, overlap 3491300 3491301 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGTCC TERM 2649 3491391 - 3491363 - R 100 -13.2 -4.82901 | gap 2, overlap 3491364 3491367 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGCCCCC TERM 2650 3491391 - 3491364 - R 93 -15.6 -3.49419 | gap 1, overlap 3491363 3491367 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGCCCCC TERM 2651 3491389 - 3491367 - R 95 -20.6 -2.88667 | overlap 3491363 3491364 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGCCC TERM 2652 3491454 - 3491426 - R 100 -13.2 -4.82901 | gap 2, opp_overlap 3491450, overlap 3491427 3491430 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGTCCCC TERM 2653 3491454 - 3491427 - R 93 -15.6 -3.49419 | gap 1, opp_overlap 3491450, overlap 3491426 3491430 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGTCCCC TERM 2654 3491452 - 3491430 - R 95 -20.6 -2.88667 | opp_overlap 3491450, overlap 3491426 3491427 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGTCC TERM 2655 3491603 - 3491575 - R 100 -13.2 -4.82901 | gap 2, overlap 3491576 3491579 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGCCTCC TERM 2656 3491603 - 3491576 - R 93 -15.6 -3.49419 | gap 1, overlap 3491575 3491579 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGCCTCC TERM 2657 3491601 - 3491579 - R 95 -20.6 -2.88667 | overlap 3491575 3491576 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGCCT TERM 2658 3491666 - 3491638 - R 100 -13.2 -4.82901 | gap 2, opp_overlap 3491662, overlap 3491639 3491642 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGTCCCC TERM 2659 3491666 - 3491639 - R 93 -15.6 -3.49419 | gap 1, opp_overlap 3491662, overlap 3491638 3491642 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGTCCCC TERM 2660 3491664 - 3491642 - R 95 -20.6 -2.88667 | opp_overlap 3491662, overlap 3491638 3491639 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGTCC TERM 2661 3491729 - 3491701 - R 100 -13.2 -4.82901 | gap 2, overlap 3491702 3491705 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGCCCCC TERM 2662 3491729 - 3491702 - R 93 -15.6 -3.49419 | gap 1, overlap 3491701 3491705 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGCCCCC TERM 2663 3491727 - 3491705 - R 95 -20.6 -2.88667 | overlap 3491701 3491702 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGCCC TERM 2664 3491792 - 3491764 - R 100 -13.2 -4.82901 | gap 2, opp_overlap 3491788, overlap 3491765 3491768 CCCGTCGCAGAAAAA GGCAGGGGCGGGTC TCA GACCCGCCCC--CC GTGGGATTCGTCCCC TERM 2665 3491792 - 3491765 - R 93 -15.6 -3.49419 | gap 1, opp_overlap 3491788, overlap 3491764 3491768 CCGTCGCAGAAAAAG GCAGGGGCGGGTC TCA GACCCGCCCCC-C GTGGGATTCGTCCCC TERM 2666 3491790 - 3491768 - R 95 -20.6 -2.88667 | opp_overlap 3491788, overlap 3491764 3491765 TCGCAGAAAAAGGCA GGGGCGGGTC TCA GACCCGCCCC CCGTGGGATTCGTCC TERM 2667 3491916 - 3491892 - R 100 -11.3 -4.82901 | overlap 3491893 3491896 CCCGTCGCAGAAAAA GGCAGGGGCGG GTC CCAGCCCCGCC CCCCGTGAGATTCGC TERM 2668 3491920 - 3491893 - R 74 -11.2 -3.49419 | gap 1, overlap 3491892 3491896 CCGTCGCAGAAAAAG GCAGGGGCGGGTC CCA GCCCCGCCCCC-C GTGAGATTCGCCCCC TERM 2669 3491918 - 3491896 - R 81 -16.2 -2.88667 | overlap 3491892 3491893 TCGCAGAAAAAGGCA GGGGCGGGTC CCA GCCCCGCCCC CCGTGAGATTCGCCC Rcas_2704 3492673 - 3491963 - | hypothetical protein TERM 2670 3492796 - 3492824 + r 100 -17.5 -3.72576 | opp_overlap 3492785 3492796 AAAAGGTGTAACAAA CCTCCCGAAGGTT CGG AACCTGCGGGAGG TTTCGTGGCGGGGAG TERM 2671 3492824 - 3492796 - R 100 -17.5 -4.19974 | opp_overlap 3492796, overlap 3492785 AAAAGGTGTAACAAA CCTCCCGAAGGTT CGG AACCTGCGGGAGG TTTCGTGGCGGGGAG Rcas_2705 3493697 - 3493209 - | hypothetical protein TERM 2672 3493770 - 3493740 - R 82 -11.8 -3.88787 | opp_overlap 3493740 3493744, overlap 3493742 CCACACTGCCAGAAA GAGCCAGATAGCCG ATG CGGCTATCCGTCGC TTGTCAGAGGTACAA TERM 2673 3493768 - 3493742 - R 79 -13 -3.53174 | opp_overlap 3493740 3493744, overlap 3493740 ACACTGCCAGAAAGA GCCAGATAGCCG ATG CGGCTATCCGTC GCTTGTCAGAGGTAC Rcas_2706 3494505 - 3493843 - | deoxyribose-phosphate aldolase Rcas_2707 3495971 - 3494706 - | hypothetical protein TERM 2674 3495037 - 3495027 - G 81 -6.8 -4.72333 | overlap 3495017 3495028 3495029 3495031 AAGGACATCGAAAAA GCGA CGC TCGC CAGCGCCCTCACCGG Rcas_2708 3496306 - 3495983 - | Rieske (2Fe-2S) domain-containing protein TERM 2675 3496513 - 3496542 + r 100 -14.9 -4.43189 | overlap 3496514 3496517 CCCGCCCTCCCCGCC AGCAGGGGCGCCC TTAT GGGCGCCCCTCCC TTTTGTAACCTTCAT TERM 2676 3496514 - 3496541 + r 90 -18.4 -3.25191 | overlap 3496513 3496517 CCGCCCTCCCCGCCA GCAGGGGCGCCC TTAT GGGCGCCCCTCC CTTTTGTAACCTTCA TERM 2677 3496517 - 3496538 + r 86 -18.7 -2.80345 | overlap 3496514 3496513 CCCTCCCCGCCAGCA GGGGCGCCC TTAT GGGCGCCCC TCCCTTTTGTAACCT Rcas_2709 3498076 - 3496571 - | multidrug resistance efflux pump-like protein TERM 2678 3497290 - 3497307 + g 83 -12.7 -3.91897 | GCTCGACACTGCTCT CGGCGCT GCGC AGCGCCG TTTCTGCCTGCACGA TERM 2679 3497531 - 3497551 + g 100 -14.7 -4.19817 | overlap 3497520 GGCTTCGAGCGTCGC GCGCGCTTC GTC GAGGCGCGC TTTTGCCTGAATGAC TERM 2680 3498142 - 3498122 - R 70 -10.4 -3.48807 | gap 1, overlap 3498115 CCAGGAAACCTACAA CGCGCTGGC TTCT GCC-GCGCG AGTGTGAGCATCACG Rcas_2710 3499282 - 3498116 - | cyclic nucleotide-binding protein TERM 2681 3498663 - 3498619 - G 71 -10.8 -3.44051 | gap 1, opp_overlap 3498610 3498620, overlap 3498620 GGGTGACCATCAGAA TGGT-TTTGCCCTGATCGACC AGAC GCTCGAACAGGGCAAACACCT GTTGCGCCGTCTTTG TERM 2682 3498662 - 3498620 - G 74 -14.3 -2.66216 | gap 1, opp_overlap 3498610 3498620, overlap 3498619 GGTGACCATCAGAAT GGT-TTTGCCCTGATCGACC AGAC GCTCGAACAGGGCAAACACC TGTTGCGCCGTCTTT TERM 2683 3498620 - 3498662 + g 78 -14.3 -3.04515 | gap 1, opp_overlap 3498619 3498620, overlap 3498610 GGTGACCATCAGAAT GGT-TTTGCCCTGATCGACC AGAC GCTCGAACAGGGCAAACACC TGTTGCGCCGTCTTT Rcas_2711 3500756 - 3499515 - | lycopene cyclase family protein Rcas_2712 3501853 - 3500753 - | peptidase M29 aminopeptidase II TERM 2684 3500872 - 3500912 + g 76 -7.3 -4.25104 | GCGAACCGGTCTCCG GGTAGCCGGCGCCGAGCGC CAG GTGCACCGTGCCGCCGATC TTTTCGTCGAACAGA Rcas_2713 3502871 - 3501846 - | protein of unknown function UPF0052 and CofD TERM 2685 3502474 - 3502457 - G 70 -12.7 -2.87564 | TGAGTTCCGCACAGA GCGTCGC GTTG GCGACGC TTACCGGCAACACCC Rcas_2714 3503523 - 3503143 - | anti-sigma-factor antagonist Rcas_2715 3504822 - 3503797 - | anti-sigma-factor antagonist TERM 2686 3504229 - 3504256 + g 74 -12.7 -3.30124 | CTCTTCCGCCTGCCG CCGCGCCGC TTCCGCCTCT GCGGCGCGG TTATCCGCCATCGCA TERM 2687 3504905 - 3504879 - H 70 -10.2 -3.56092 | opp_overlap 3504881 3504883 3504885 3504904 CTATTATGCCTCAAA CAGAGGGTAAGA TGA TCTCACTCTCTG TTCAAAATAGTGAAC TERM 2688 3505571 - 3505590 + G 78 -2.8 -5.06451 | AAACGTATACAAATA TGCGCC TCTGGTCT GGTGCA TTTTTTCCAATGATC Rcas_2716 3505039 - 3506013 + | hypothetical protein Rcas_2717 3507516 - 3506143 - | hypothetical protein TERM 2689 3506825 - 3506809 - G 72 -2.1 -4.67942 | overlap 3506803 3506811 CTGAAGAAACGAAAA CGGTTCG ATT CGAGCGG CATCGATCACGAGAG Rcas_2718 3508731 - 3507541 - | protein of unknown function UPF0052 and CofD TERM 2690 3507726 - 3507743 + g 83 -9.1 -4.28713 | overlap 3507739 GCGTCGTCAACCGGT CGGTCGT GCTG ACGGCCG TTTCTTCATACTCTT Rcas_2719 3509866 - 3508760 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 2691 3509490 - 3509474 - G 81 -13.7 -3.64822 | AGGTTCTGATGGAAA CGGCGGA CAC TCCGCCG GCAGGTCGCCATCGA Rcas_2720 3511311 - 3509905 - | phosphomannomutase TERM 2692 3511215 - 3511201 - G 78 -7 -4.56597 | GTGCTGCCGGAAAAA CGTGCC GCC GGCGCG TCCCAACGTCCGATA TERM 2693 3511471 - 3511516 + r 73 -9.8 -3.59979 | gap 3, overlap 3511472 3511477 GGCATGGTCACCCCG AGCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGCG TTTACCCTGAGCGAA TERM 2694 3511472 - 3511515 + r 73 -13.3 -2.75844 | gap 3, overlap 3511471 3511477 GCATGGTCACCCCGA GCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGC GTTTACCCTGAGCGA TERM 2695 3511477 - 3511512 + r 72 -14 -2.65354 | gap 1, overlap 3511472 3511471 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCGCGC TGCGTTTACCCTGAG Rcas_2721 3512478 - 3511615 - | hypothetical protein TERM 2696 3512115 - 3512098 - G 71 -5.5 -4.36554 | overlap 3512101 GATCAGGATAAGAAA GACCAGG ATCA CCTGTTC GAGCCGTTCATTCGA TERM 2697 3512515 - 3512505 - R 73 -4.6 -4.62336 | overlap 3512506 3512507 ACTTCACTGCAAAAA GCGG TAA CCAC GAAGGTCACCAAGGG TERM 2698 3513762 - 3513752 - R 73 -4.6 -4.62336 | overlap 3513753 3513754 ACTTTACTGCAAAAA GCGG TAA CCAC GAAGGTCACCAAGGG Rcas_2722 3515793 - 3514300 - | O-antigen polymerase TERM 2699 3514747 - 3514698 - G 71 -11.4 -3.48395 | ACTCGCGCCAGAGAA GCAGACGC-GCATCGACGCTCCCG CCGC CAGGACCGCCG-CGCAGCGTCAGC GCCAGCCCGATAACT TERM 2700 3515307 - 3515296 - G 74 -5.8 -4.43859 | overlap 3515302 3515303 CACAAGCGCATAAAA GAGC AACG GCTC GACGATCAGCCAGCG Rcas_2723 3517484 - 3515832 - | hypothetical protein TERM 2701 3519382 - 3519365 - g 76 -8.3 -4.13304 | AAATCATGGGCAAAA CGCAGCG CGAA CGCGGCG TGCCCGAACATATTG TERM 2702 3520438 - 3520412 - g 76 -13.6 -3.14693 | overlap 3520410 3520408 TCGATGATGAAGAGA GTGTGCGCGCCG TTA CGGCGCGCATGC TGGAGTGGATGGGAC Rcas_2724 3518263 - 3520746 + | multi-sensor hybrid histidine kinase Rcas_2725 3520769 - 3523117 + | hypothetical protein TERM 2703 3523537 - 3523514 - gf 72 -11 -3.29511 | opp_overlap 3523508 3523518, overlap 3523530 3523531 TCTATCTGCTGACAA TGCGCCTGTT CGAC AACCGGCGCA TCGCCATTGTCGCCG Rcas_2726 3523177 - 3525240 + | tetratricopeptide TPR_4 TERM 2704 3526682 - 3526657 - gf 89 -12.5 -4.13767 | gap 1 GTGGGCAGTCGAAAA CCTGACGCGCGG CAG CCGCGCG-CTGG CAGGGGATGTCTGGA TERM 2705 3526816 - 3526864 + GF 72 -12.9 -3.06696 | overlap 3526819 GCGCGGCGACATCGA GCGGGCGCGGGTGGCTTACCGCG CGG CGTGGGATGCGAGCCGCGCCTAC TATATTGCCAGCGCG TERM 2706 3526819 - 3526861 + GF 79 -15.4 -2.7535 | overlap 3526816 CGGCGACATCGAGCG GGCGCGGGTGGCTTACCGCG CGG CGTGGGATGCGAGCCGCGCC TACTATATTGCCAGC TERM 2707 3526921 - 3526933 + GF 70 -10.5 -3.53563 | TGGCAACCTGGACGA GGCGC GGC GCGCC TTTGCCGGAGCATAT Rcas_2727 3525212 - 3527401 + | glycosyl transferase family protein TERM 2708 3527530 - 3527518 - f 76 -10.5 -3.78329 | GCTGAGCAAGTGAAA GCCCC GTC GGGGC TGCCGATGCCAATGT TERM 2709 3527707 - 3527728 + F 74 -10.9 -3.53012 | gap 1, opp_overlap 3527681 3527703 3527700, overlap 3527704 AGGGACAAGCATCGA GCAGCGCGTG TAT CACG-GCTGC TTTACAGCCGAACGG Rcas_2728 3528038 - 3528511 + | hypothetical protein Rcas_2729 3529307 - 3529089 - | hypothetical protein Rcas_2730 3533627 - 3529338 - | TPR repeat-containing adenylate/guanylate cyclase TERM 2710 3531734 - 3531754 + g 73 -8.2 -4.07568 | overlap 3531735 CCATGCCCGCACCGA GCGCTGCC AGATG GGCAGCGA TTTTCCCCGCGCGAA Rcas_2731 3535214 - 3533703 - | hypothetical protein Rcas_2732 3535546 - 3535244 - | ArsR family transcriptional regulator TERM 2711 3535766 - 3535808 + r 93 -15.7 -3.59979 | overlap 3535758 ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGTGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2733 3536707 - 3535946 - | hypothetical protein Rcas_2734 3537729 - 3536704 - | ABC transporter related TERM 2712 3537674 - 3537654 - G 76 -12.5 -3.53224 | overlap 3537641 3537655 CAGCGCCCTGCGAAA CGCGCAGCG ATA CGCCGCGCA ACACGGGAACACCGT TERM 2713 3537673 - 3537655 - G 72 -13.8 -2.71791 | overlap 3537641 3537654 AGCGCCCTGCGAAAC GCGCAGCG ATA CGCCGCGC AACACGGGAACACCG Rcas_2735 3538641 - 3537793 - | hypothetical protein TERM 2714 3538363 - 3538348 - G 75 -11.8 -3.66018 | overlap 3538357 CGATGACGCCAACAA GCCGGC AAAC GCCGGC ACAAGAAATGCGCCT Rcas_2736 3539046 - 3538669 - | NADH ubiquinone oxidoreductase 20 kDa subunit Rcas_2737 3540566 - 3539112 - | NADH/ubiquinone/plastoquinone (complex I) Rcas_2738 3541334 - 3540615 - | hypothetical protein Rcas_2739 3543062 - 3541338 - | hypothetical protein TERM 2715 3541633 - 3541601 - G 74 -14.9 -2.64155 | overlap 3541598 3541597 CGCGGCGTAAAGCGA CCGGTGCAGCGAT CAACAGC AACGCTGCACCGG CTGATGCGATTGAAC Rcas_2740 3544146 - 3543070 - | NADH-ubiquinone oxidoreductase chain 49kDa TERM 2716 3544228 - 3544200 - R 88 -18.9 -2.55722 | opp_overlap 3544199 3544198 3544196, overlap 3544196 3544205 ATATCATGGAATGGA GCGAAGGCGCAGC ATC GCTGCGCCTCCAC GGTGTTGTGCGAATG TERM 2717 3544223 - 3544205 - R 83 -16 -3.10112 | opp_overlap 3544199 3544198 3544196, overlap 3544200 3544196 ATGGAATGGAGCGAA GGCGCAGC ATC GCTGCGCC TCCACGGTGTTGTGC Rcas_2741 3544855 - 3544478 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 2718 3544523 - 3544507 - G 71 -10.8 -3.52906 | opp_overlap 3544506 3544505, overlap 3544505 TTATTGCGAGAAAGA CCGGCG TCAGG CGCCGG AGTTTCCAGAGCGTT TERM 2719 3545195 - 3545214 + r 70 -4.4 -4.56436 | gap 1, overlap 3545186 3545199 GCTAGAGATCGAGCC GAACTTTCG CGC CGAAA-TTC TTCTTTTCTTTACTG TERM 2720 3545199 - 3545211 + r 71 -6.3 -4.35474 | overlap 3545195 GAGATCGAGCCGAAC TTTCG CGC CGAAA TTCTTCTTTTCTTTA Rcas_2742 3546797 - 3545181 - | AAA ATPase TERM 2721 3547252 - 3547274 + G 74 -9.2 -3.95073 | overlap 3547254 GTTGCGCGCCAGGGG TGTCGATGCT GAG GGCATCGATA TTTCTGCGTATGCGA Rcas_2743 3547043 - 3547915 + | methyltransferase type 12 Rcas_2744 3547932 - 3549638 + | glycosyl transferase, group 1 TERM 2722 3549766 - 3549781 + G 74 -4.6 -4.62302 | overlap 3549765 3549768 CGCGACGGCACGCCG GAGCAG ATTG CTGCCC TTTTTCCCGATATTA TERM 2723 3549933 - 3549951 + G 72 -7.3 -4.15565 | opp_overlap 3549929 TGATCGAGAATGGCT CGGCGCG ATCAC CGCTCCG TTTTGCGATCCTGAA TERM 2724 3552192 - 3552182 - g 71 -8.2 -3.87815 | TGGGAGGCGCAGAAA GCGG AAT CCGC GGATGGGCGGAACAA TERM 2725 3552628 - 3552663 + G 83 -12.7 -3.88498 | opp_overlap 3552657 ATGCTGGAACAGGCT GCCGCTCTCTTTTTC AATTCG GAAGAAGAGAGCGAC TTTGCTCTGTGCGCG Rcas_2745 3549631 - 3553434 + | glycosyl transferase family protein Rcas_2746 3554361 - 3553831 - | phosphodiesterase TERM 2726 3555567 - 3555607 + G 91 -16.2 -3.54741 | gap 1 TGACCGACCTGAGCG CATCGTGGGCGCTGCCGAC ATTG GTCGGC-GCGCTGGCGATG TTTGGCGCACTGGTG TERM 2727 3555720 - 3555738 + G 71 -13.8 -2.56715 | overlap 3555715 3555713 3555716 3555732 GCATCCTGGCCGGCT GCGCCGTC TTT GGCGGCGC TACATTCGTGCCGCT Rcas_2747 3554909 - 3556411 + | EmrB/QacA family drug resistance transporter TERM 2728 3556467 - 3556416 - Tf 84 -17.2 -2.80935 | gap 1, overlap 3556451 AGCGGAGGTAGCACA GTAGGGGCGCGGCGCTGCCGCGCCC ACA GGAC-CAACGGCGCCGCACCCACAC CGACTCGTGCCTGTG TERM 2729 3557068 - 3557078 + GT 74 -3.2 -4.81249 | TCATTCCAGGCACAC GGTG GGG CATC TTTTTCGGTTTGCAG Rcas_2749 3559963 - 3557780 - | membrane protein-like protein Rcas_2748 3556602 - 3557897 + | major facilitator transporter Rcas_2750 3561169 - 3560027 - | diguanylate cyclase TERM 2730 3560763 - 3560735 - G 73 -8.9 -4.04752 | gap 2, overlap 3560753 AAATGATACGAGAAA GACGCTGGCTGCG ATCAA CGC-GCC-GCGTC GCACATCATAGAGAT Rcas_2751 3561377 - 3562450 + | anti-sigma-factor antagonist Rcas_2752 3562475 - 3563515 + | glycosyl transferase group 1 TERM 2731 3563765 - 3563784 + G 71 -13.6 -2.54896 | overlap 3563760 TGGTCGGTGGGCGTG GACGAGCG CCTG CGCTCGTC TGGCTTCGCTACACC TERM 2732 3564028 - 3563988 - g 70 -12.6 -2.95476 | gap 1, opp_overlap 3563988, overlap 3563997 3563999 AGGATGGACGAGACA CCTGATCAAGAGCGGCGGT CAAA ACCGCCAC-CACGACCAGG TCTTCGGCGATTTCA TERM 2733 3565604 - 3565622 + G 70 -11.6 -3.18768 | overlap 3565602 3565600 GCGAGCATGATCCCT CGCGCCCG GAG CGCGCGCG TCTGTTGATCTTCGA TERM 2734 3565823 - 3565794 - g 100 -14.9 -4.2558 | opp_overlap 3565797, overlap 3565795 GATCCTGTATGAAAA CCTGGCGGCGCCG CTGC CGGCGCCGCCACC CTCGCCTCCGCCGTC TERM 2735 3565822 - 3565795 - g 91 -18.4 -3.15027 | opp_overlap 3565797, overlap 3565794 ATCCTGTATGAAAAC CTGGCGGCGCCG CTGC CGGCGCCGCCAC CCTCGCCTCCGCCGT Rcas_2753 3563512 - 3565905 + | FG-GAP repeat-containing protein Rcas_2754 3566294 - 3567292 + | ROK family protein Rcas_2755 3567289 - 3568488 + | oxidoreductase domain-containing protein Rcas_2756 3568579 - 3569391 + | hypothetical protein Rcas_2757 3569406 - 3570176 + | short-chain dehydrogenase/reductase SDR TERM 2736 3570777 - 3570789 + G 74 -9.1 -3.89501 | TGCTGTGCGCCCTGA TGCGC CGC GCGCA TTTGTCGAACTGTTC Rcas_2758 3570202 - 3571224 + | methionine synthase vitamin-B12 independent TERM 2737 3571282 - 3571249 - T 100 -14 -4.72846 | gap 2, opp_overlap 3571258, overlap 3571251 GCACACAGCCAAAAA GACGGAAGAGCCGCCC GATA GGGCGGCTCTT-CG-C GAGACGCCAGCACGG TERM 2738 3571283 - 3571251 - T 100 -20 -3.97602 | gap 1, opp_overlap 3571258, overlap 3571249 ACACAGCCAAAAAGA CG-GAAGAGCCGCCC GATA GGGCGGCTCTTCGCG AGACGCCAGCACGGT TERM 2739 3571258 - 3571275 + T 76 -14.1 -3.01712 | opp_overlap 3571249 3571251 CAAAAAGACGGAAGA GCCGCCC GATA GGGCGGC TCTTCGCGAGACGCC Rcas_2759 3571541 - 3571299 - | hypothetical protein TERM 2740 3571512 - 3571493 - G 76 -10 -3.90112 | overlap 3571494 TTTCCTTTAACGAAA CCGACGCA TCCT TGCGTCGA CCTGCGCGGATTATA Rcas_2760 3571668 - 3572582 + | diacylglycerol kinase catalytic region Rcas_2761 3573539 - 3572589 - | hypothetical protein TERM 2741 3575729 - 3575772 + G 75 -14.5 -2.79183 | gap 1, opp_overlap 3575770, overlap 3575758 TGCGCGCGGCGGCGG CGCGGTCGATGGCGGCGCGC CTGAT GCGCCGCGCCA-CGACAGCG TCTGATCCGGCTGAG Rcas_2762 3574600 - 3575958 + | von Willebrand factor type A Rcas_2763 3575977 - 3577197 + | tryptophan synthase subunit beta TERM 2742 3577248 - 3577218 - f 95 -19 -3.33815 | ACCCGTCGCAACCAA CGTGGGGACGTGCC GAT GGCACATCCCCGCG CGCAGGGATGGACCG Rcas_2764 3577219 - 3577695 + | hypothetical protein Rcas_2765 3577692 - 3578351 + | DNA-(apurinic or apyrimidinic site) lyase TERM 2743 3578473 - 3578457 - g 93 -7.9 -4.98255 | opp_overlap 3578472, overlap 3578472 TCGTAAGCACAAAAA CGCCGGC GCA GCCAACG TGACGTTCCACGATG TERM 2744 3578527 - 3578542 + G 71 -6 -4.38927 | opp_overlap 3578521 3578525 3578520 3578523 GACGAAAACGACACG CCGCGC CAGC GCACGG TTTGTTATCTGGGAA Rcas_2766 3578422 - 3578844 + | hypothetical protein TERM 2745 3578884 - 3578850 - T 100 -22.8 -2.62616 | CGAGGTGTGATACCA GCGGGTCGGCGCAGGC AGT GCCGGCGCCTACCCGC CGCCTGCTGCGTCCC Rcas_2767 3582656 - 3578901 - | magnesium chelatase, H subunit Rcas_2768 3582921 - 3584006 + | hypothetical protein Rcas_2769 3584006 - 3584251 + | hypothetical protein Rcas_2770 3584305 - 3584448 + | hypothetical protein Rcas_2771 3585202 - 3584528 - | phospholipid/glycerol acyltransferase Rcas_2772 3585774 - 3585325 - | hypothetical protein Rcas_2773 3588813 - 3585820 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 2746 3588487 - 3588466 - G 73 -10.9 -3.56109 | gap 1, opp_overlap 3588471 3588486, overlap 3588462 CAAATAGATAATGAA CGAACCCTGC GCT GC-GGGTTCG TCGAGTTGCGCCGCC TERM 2747 3591346 - 3591322 - g 81 -15.7 -3.09492 | CGGGGAACTGCAACA TCGTGCGCCGC AAC GCGGCGCAAGA ACTGGTCGCGTGGCT Rcas_2774 3589185 - 3594110 + | endonuclease/exonuclease/phosphatase Rcas_2775 3594206 - 3594595 + | hypothetical protein Rcas_2776 3594715 - 3594948 + | hypothetical protein Rcas_2777 3594945 - 3595319 + | hypothetical protein Rcas_2778 3595424 - 3595720 + | chaperonin Cpn10 TERM 2748 3596467 - 3596456 - g 77 -2.2 -5.03314 | overlap 3596458 GCGACCGGCAAAAAA GACC TGGT GATC ATCGCCGAGGATGTC TERM 2749 3597340 - 3597325 - g 71 -8.2 -3.96068 | GGAGCCGAAGAAGAA CGGCGC ACGC ACGCCG TCGATGCCGGATGAG Rcas_2779 3595724 - 3597364 + | chaperonin GroEL TERM 2750 3597398 - 3597425 + T 100 -17.8 -5.13648 | gap 1, overlap 3597399 TGAGCCGTATGTGAA G-GCCGGAGAGCG CGG CGCTCTCCGGCTC TTTTATTTCTGTTTG TERM 2751 3597399 - 3597423 + T 100 -21.5 -4.15514 | overlap 3597398 GAGCCGTATGTGAAG GCCGGAGAGCG CGG CGCTCTCCGGC TCTTTTATTTCTGTT Rcas_2780 3597996 - 3597502 - | cytochrome c class I TERM 2752 3597542 - 3597560 + g 73 -6.6 -4.371 | overlap 3597543 CGCTGAAATTCCTGT ACGTCTGG AGG CCAGGCGC TTTTAATATACTCCA TERM 2753 3597952 - 3597969 + g 100 -5.5 -5.75342 | overlap 3597954 CACGATGCCAGATGT CCGTTGC GATG GCAACCG TTTTTTTTGGACGCG Rcas_2781 3599167 - 3598025 - | integral membrane sensor signal transduction histidine kinase Rcas_2782 3599862 - 3599167 - | two component transcriptional regulator Rcas_2783 3600504 - 3599896 - | hypothetical protein TERM 2754 3600112 - 3600083 - G 91 -12.1 -4.37092 | overlap 3600094 ATCGCTTCGATAAAA CGCCGATCGAACG GCGC CGGTCCATCGGCG ACCATCATCGGACCC Rcas_2784 3600697 - 3601308 + | hypothetical protein Rcas_2785 3602641 - 3602342 - | hypothetical protein TERM 2755 3602535 - 3602555 + g 74 -10.4 -3.8211 | gap 1 GCAGCCCGCCCCATC CCCG-GCGG TGTG CCGCGCGGG TTCTTGTACATCAGC TERM 2756 3602599 - 3602619 + g 78 -4.6 -4.68724 | gap 1, overlap 3602582 3602600 CCAGTTCGTCGTGCA ACCGCTCGG CGAT CCG-GCGGA TTTTGTCTTCGCTCA Rcas_2786 3604258 - 3602651 - | hypothetical protein Rcas_2787 3605790 - 3604261 - | glycogen/starch synthase, ADP-glucose type Rcas_2788 3606882 - 3605806 - | hypothetical protein Rcas_2789 3608051 - 3607080 - | putative PAS/PAC sensor protein Rcas_2790 3608973 - 3608227 - | deoxyribose-phosphate aldolase Rcas_2791 3609425 - 3610573 + | oxidoreductase domain-containing protein Rcas_2792 3610592 - 3611509 + | xylose isomerase domain-containing protein Rcas_2793 3612205 - 3611585 - | oxidoreductase molybdopterin binding Rcas_2794 3612612 - 3612220 - | hypothetical protein Rcas_2795 3612955 - 3613755 + | two component transcriptional regulator Rcas_2796 3615183 - 3614095 - | GntR family transcriptional regulator TERM 2757 3615292 - 3615266 - H 71 -5.9 -4.3467 | gap 1 ATGTGTATACTAAAA GTGCTGGTTCTT TGTG ATGAACC-GCAC AAGGTTACCGCCAGT Rcas_2797 3615334 - 3615549 + | hypothetical protein TERM 2758 3615576 - 3615596 + T 100 -9 -5.18726 | gap 1, opp_overlap 3615576 3615577, overlap 3615576 3615577 CCACGGCGAGGAGAA G-GGAGGGC GAAT GCCCTCCGC TTTTTATTGTGCCGA Rcas_2798 3616558 - 3615740 - | methyltransferase type 11 TERM 2759 3616618 - 3616601 - R 71 -6.3 -4.29493 | CAGTAAATACACAAA TGCGCAT AAAG ATGCACA AACACATCAGCGCCC Rcas_2799 3620202 - 3616849 - | peptidase S41 TERM 2760 3617116 - 3617089 - G 83 -5.4 -5.02323 | opp_overlap 3617077, overlap 3617091 CGACCAGAAAGAAAA CTCTGGCTGGGT TGTC ACCCCGCCATCG ATGAGCGTGTCACGT TERM 2761 3617732 - 3617754 + g 72 -12 -3.34013 | opp_overlap 3617720 ATATTGACGCCGGGG CGCGCCAG CGGCGAA CTGGCGCG TTCGTTCCACACATC TERM 2762 3618789 - 3618774 - G 70 -10.4 -3.54297 | ACCGATCAACCAGAA CCGGTC GGGT GACCGG CGTGATGGTCCCGGT TERM 2763 3622280 - 3622304 + G 71 -8.6 -3.86015 | opp_overlap 3622275 CGGCATCGAAGTCGA GGTCTCGAAC AAAGA GTTCAAGACC TTTATGGACGCGCTC Rcas_2800 3620835 - 3622727 + | extracellular solute-binding protein Rcas_2801 3622821 - 3623744 + | binding-protein-dependent transport systems inner membrane component Rcas_2802 3623763 - 3624665 + | binding-protein-dependent transport systems inner membrane component Rcas_2803 3624935 - 3625585 + | ArsR family transcriptional regulator TERM 2764 3625861 - 3625871 + G 73 -6.8 -4.26076 | CGAAGTGACCTCGAT TGCC AGT GGCA TTTTGCTCGAAATCG TERM 2765 3626172 - 3626162 - g 71 -8.2 -3.9534 | opp_overlap 3626162 ATCGAGATGCAGAAA GCGG CTG CCGC TTTGCTGCCCGGCGC TERM 2766 3626461 - 3626499 + G 90 -13.9 -4.07568 | gap 2 CTTTGAGGTCGATAT GGGGCGCG-TGCTGG-CGC ACC GCGACCGGTATCGCGCCTC TTTTGAACAGCAAGG TERM 2767 3626736 - 3626700 - g 71 -5 -4.4648 | gap 1, overlap 3626731 ACGCCGACGAGAAAA GTCTGGCCG-GCATCGC GCGC GCGTTGAACGACCTGAC GGAGCGCGCCCGCGC Rcas_2804 3625709 - 3627046 + | dehydrogenase catalytic domain-containing protein Rcas_2805 3630529 - 3627056 - | serine/threonine kinase protein TERM 2768 3627921 - 3627932 + g 74 -5.8 -4.52589 | GCCGATGACGTTTGA GCGT CGGA ACGC TTTTCTGTGCGCGCA Rcas_2806 3632048 - 3630588 - | hypothetical protein Rcas_2807 3636337 - 3632063 - | FHA domain-containing protein TERM 2769 3634943 - 3634967 + g 76 -12.9 -3.41988 | opp_overlap 3634937, overlap 3634942 3634942 CGCCTGAAACGCTGC GGCAAGCGC CGTTTGT GCGCTTGCC TGTTGTTCGGTCGGC Rcas_2808 3639058 - 3636374 - | FHA domain-containing protein TERM 2770 3638514 - 3638491 - G 78 -10.2 -4.09685 | GTTGATCCGGCAAAA CGGCGAGCGC AACC GCAGTCGCCG GTTCAACGGCGGCTC Rcas_2809 3640935 - 3639079 - | serine/threonine kinase protein Rcas_2810 3644039 - 3640935 - | serine/threonine kinase protein TERM 2771 3643236 - 3643215 - G 79 -13.7 -3.48593 | overlap 3643216 CACCGCTTCATACAA CGCCGCCGA TAGA TCGGCGGCA GTGGCGAAGCGCTCC TERM 2772 3643235 - 3643216 - G 75 -15 -2.68942 | overlap 3643215 ACCGCTTCATACAAC GCCGCCGA TAGA TCGGCGGC AGTGGCGAAGCGCTC TERM 2773 3643398 - 3643386 - G 74 -9.1 -3.96148 | opp_overlap 3643393 CGTTTTGACCACAAA CGGCA GCG TGCCG GTCGCCACTTCGTAC Rcas_2811 3647274 - 3644101 - | serine/threonine kinase protein TERM 2774 3644500 - 3644488 - G 72 -7.7 -4.16016 | opp_overlap 3644478 CCAGTTGCCAAGAAA GGCAT TGA ATGCC GCCGCCTGCGTCGTT Rcas_2812 3648899 - 3647292 - | methyltransferase type 12 Rcas_2813 3649960 - 3648896 - | FHA domain-containing protein Rcas_2814 3652140 - 3650110 - | hypothetical protein Rcas_2815 3652544 - 3652152 - | GPW/gp25 family protein Rcas_2816 3652841 - 3652551 - | PAAR repeat-containing protein Rcas_2817 3654636 - 3652855 - | Rhs element Vgr protein TERM 2775 3654616 - 3654602 - G 72 -4.2 -4.66163 | opp_overlap 3654602 AGTTTCAGGTAAAAA TCGGAA ACA TGCCGA TCATTGTTATTGTTA Rcas_2818 3655306 - 3654629 - | peptidoglycan-binding LysM Rcas_2819 3657939 - 3655321 - | hypothetical protein Rcas_2820 3658555 - 3658127 - | phage tail protein Rcas_2821 3659124 - 3658756 - | hypothetical protein TERM 2776 3659483 - 3659526 + r 100 -22.6 -2.78463 | gap 1, opp_overlap 3659471, overlap 3659491 CAACGCCGGTTCTGA CGCCGGTCTGAGACCGG-GTT GCC GACGCCGGTCTGAGACCGGCG TCTACTGGACGCGCT Rcas_2822 3659968 - 3659528 - | phage tail protein Rcas_2823 3661552 - 3659987 - | tail sheath protein Rcas_2824 3662527 - 3661565 - | hypothetical protein Rcas_2825 3662946 - 3662524 - | hypothetical protein Rcas_2826 3664634 - 3662970 - | peptidoglycan binding domain-containing protein TERM 2777 3663756 - 3663732 - G 73 -8.5 -4.03234 | opp_overlap 3663715 3663752, overlap 3663733 CGCCTTGCACAGAAA GGCGCGTTCCA TAC TGGAACCCGCA CTCTGCAACAAGGCG Rcas_2827 3666616 - 3664724 - | peptidoglycan binding domain-containing protein TERM 2778 3664872 - 3664824 - G 70 -10.5 -3.60627 | opp_overlap 3664832 TGAGGCGACGTCAAA TTCG-GGTATGCGCGCAGCGCAT CTTCC ATGCGCTGCT-GCATAGCGCGAA CAATCTGCTCCATCG Rcas_2828 3667565 - 3666636 - | hypothetical protein Rcas_2829 3669236 - 3667584 - | hypothetical protein TERM 2779 3667886 - 3667908 + g 84 -11.2 -4.18018 | GGATGCTTTTTTGCT GGCGCTCCAG AGC CTGGCGCGTC TTTTCGCTCAAGCCG Rcas_2830 3672029 - 3670056 - | ATPase central domain-containing protein Rcas_2831 3672635 - 3672057 - | hypothetical protein TERM 2780 3673453 - 3673408 - g 95 -18.9 -3.51032 | gap 1, overlap 3673395 ATCGCTCAACCACAA CCGCAGGCGGCGCCTCCTGGCG GAG CGCCAGC-GGCGCGACCGGCGG ATGCCGGCGGCTCAG Rcas_2832 3672925 - 3674508 + | hypothetical protein Rcas_2833 3674966 - 3674568 - | hypothetical protein Rcas_2834 3675551 - 3675132 - | RbsD or FucU transport TERM 2781 3675221 - 3675206 - G 81 -11.8 -3.9461 | CGGTGGCAATAACAA GCGCCG TATC CGGCGC CCGCGCAGCGTCGTA Rcas_2835 3675918 - 3675625 - | MerR family transcriptional regulator Rcas_2836 3676796 - 3675933 - | chaperone DnaJ domain-containing protein TERM 2782 3676718 - 3676728 + g 72 -2.4 -4.8048 | ACTGACGCGCGAGTT TGCG GTA CGCC TTTTTGATCTCGGCG TERM 2783 3677028 - 3677046 + r 77 -11.7 -3.62597 | opp_overlap 3677005 3677025 3677023 3677028 3677040 TCGGCACCAACAGCA GGGGCGA GATGA TCGCCCC TTCTTCCACGATGGG TERM 2784 3677141 - 3677171 + r 100 -14.7 -4.36914 | CAGCCAGAGGTTCAA CGCGCCTGACAGG TGAGT TCGGTCAGGCGCG TTTTGTGCGCCCCCA Rcas_2837 3678461 - 3677271 - | extracellular solute-binding protein Rcas_2838 3680187 - 3679327 - | ornithine carbamoyltransferase Rcas_2839 3681243 - 3680335 - | binding-protein-dependent transport systems inner membrane component TERM 2785 3680707 - 3680695 - G 70 -7.7 -3.99324 | CGGCAGCACCATAAA TGGCA GGC TGCCA TAGATCAGCCCAATC Rcas_2840 3682377 - 3681259 - | spermidine/putrescine ABC transporter ATPase subunit TERM 2786 3682657 - 3682619 - H 100 -18.8 -3.65902 | overlap 3682620 GCCAGGGGATTGAAA CGCCGGGTGGACGACGGC ATT ACCGTCGCCCACCCGTCT CAATGTGCCCGGAAC TERM 2787 3682656 - 3682620 - H 100 -22.3 -2.79327 | overlap 3682619 CCAGGGGATTGAAAC GCCGGGTGGACGACGGC ATT ACCGTCGCCCACCCGTC TCAATGTGCCCGGAA Rcas_2841 3683137 - 3685416 + | polymorphic outer membrane protein TERM 2788 3685477 - 3685458 - f 82 -12.1 -3.66139 | overlap 3685451 GAGAGACACGGGAAA GGCGCCC CGGTGT GGGCGCC AGACGAAGAAGGCAC Rcas_2842 3685693 - 3686268 + | cell wall anchor domain-containing protein TERM 2789 3686490 - 3686526 + F 100 -6.7 -5.63517 | gap 2, opp_overlap 3686503 3686505, overlap 3686498 CGCGCCGGCTGATAG CCTCTACGGAAAGGACC ACTCC GGTC-TG-CCGTAGAGG TTTTTTGTTTGAAGA Rcas_2843 3686578 - 3686970 + | CrcB protein Rcas_2844 3686985 - 3688271 + | CBS domain-containing protein TERM 2790 3688482 - 3688467 - f 84 -11.8 -4.11394 | opp_overlap 3688465 ACGGTATCCGCAAAA CCCGGC GCGC GCCGGG CATAATGTGAGCATG TERM 2791 3689303 - 3689291 - g 76 -5.5 -4.56597 | overlap 3689298 3689302 GCCGCCGCTGAAAAA GCCGA AAG TCAGC GGCAGAAAACCCTGA Rcas_2845 3688502 - 3690181 + | putative ABC transporter ATP-binding protein Rcas_2846 3690307 - 3692166 + | phosphoenolpyruvate carboxykinase TERM 2792 3692310 - 3692327 + F 70 -4 -4.65838 | overlap 3692312 TTCGCGCGCTTTCCC CCGGCG CTCCCT CGCCTG TTTTTCACCTCTGTG Rcas_2847 3692385 - 3693503 + | oxidoreductase domain-containing protein TERM 2793 3693799 - 3693834 + T 100 -22.8 -3.61715 | opp_overlap 3693805 TGAGCACGAGCCGGA CGATAATAGCCCTGGC AACC GCCGGGGCTATTATCG TTCTTGCCGCAGGTC TERM 2794 3693828 - 3693805 - T 76 -12.4 -3.41051 | opp_overlap 3693799 CGAGCCGGACGATAA TAGCCCTGGC AACC GCCGGGGCTA TTATCGTTCTTGCCG Rcas_2848 3694718 - 3693873 - | gluconolactonase Rcas_2849 3694858 - 3697743 + | protein serine phosphatase with GAF(s) sensor(s) TERM 2795 3698567 - 3698521 - g 71 -10.9 -3.45031 | gap 2 CGTCGAAAAACTGAA GGCGCGTCTGGAGGA-GAT-GCG CGC CGCCATCATCCGCGACACGCGCC CGATCACAGACGTGT TERM 2796 3700987 - 3701012 + G 72 -2.5 -4.74103 | gap 1, overlap 3700988 CGAGGTGGACTGGCA GGA-GCGCCAGA ATC TGTTGCGCGTCC TTTTTCCCTTGCGGC Rcas_2851 3698492 - 3701677 + | Alpha-mannosidase TERM 2797 3701755 - 3701708 - f 70 -10.4 -3.53224 | overlap 3701735 GACCTGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2798 3701782 - 3701735 - f 70 -10.4 -3.53224 | overlap 3701708 3701762 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2799 3701809 - 3701762 - f 79 -12.6 -3.53224 | overlap 3701735 3701789 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCTGCCC CGGAAAGGAAAGGGC TERM 2800 3701885 - 3701848 - f 71 -8.3 -4.05788 | overlap 3701870 GCCCCGGAAAGGAAA GGGCTGAGACCTGCCCC GGAA AGGACAGGGCTGAGACC GGTCCCGGAAAGGAC TERM 2801 3701917 - 3701870 - f 79 -12.6 -3.53224 | overlap 3701848 3701897 GACCTGCCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCTGCCC CGGAAAGGAAAGGGC TERM 2802 3701966 - 3701929 - f 71 -8.3 -4.05788 | overlap 3701897 3701951 GCCCCGGAAAGGAAA GGGCTGAGACCTGCCCC GGAA AGGACAGGGCTGAGACC GGTCCCGGAAAGGAC TERM 2803 3701998 - 3701951 - f 70 -10.4 -3.53224 | overlap 3701929 3701978 GACCTGCCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2804 3702025 - 3701978 - f 70 -10.4 -3.53224 | overlap 3701951 3702005 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2805 3702052 - 3702005 - f 70 -10.4 -3.53224 | overlap 3701978 3702032 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2806 3702079 - 3702032 - f 70 -10.4 -3.53224 | overlap 3702005 3702059 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCGGTCC TGGAAAGGACAGGGC TERM 2807 3702106 - 3702059 - f 79 -12.6 -3.53224 | overlap 3702032 3702086 GACCGGTCCCGGAAA GGACAGGGCTGAGACCGGTCCT GGAA AGGACAGGGCTGAGACCGGTCC CGGAAAGGACAGGGC TERM 2808 3702133 - 3702086 - f 79 -12.6 -3.53224 | overlap 3702059 3702113 GACCGGTCCTGGAAA GGACAGGGCTGAGACCGGTCCC GGAA AGGACAGGGCTGAGACCTGCCC CCACAGGTCTGAGAC TERM 2809 3702154 - 3702113 - f 93 -15.9 -3.53224 | overlap 3702086 GACCGGTCCCGGAAA GGACAGGGCTGAGACCTGC CCCC ACAGGTCTGAGACCTGCCC CGATGACCCCGACGA TERM 2810 3702385 - 3702366 - g 76 -9.2 -4.09243 | opp_overlap 3702366 3702365 CACACCTGCCGAAAA CGACGAGC GCGC GCTCGACG CTTATGCTGCCTCCG TERM 2811 3703079 - 3703123 + G 75 -14.3 -2.72463 | gap 1, opp_overlap 3703120, overlap 3703120 TTGTTTCGGTGTACG GCGCCGGTCCCGGTAGCGAC ATCAGC GTCGC-ATCGGGAACAGCGC TCATTCGCGCTGGAT Rcas_2852 3702157 - 3703170 + | arginase/agmatinase/formiminoglutamase Rcas_2854 3703783 - 3704754 + | GCN5-related N-acetyltransferase TERM 2812 3705280 - 3705293 + G 76 -6.7 -4.47328 | CTCTTCATCCGCGCG CTGAC CATC GTCAG TTTTGTCGTGGGATT Rcas_2855 3705244 - 3707424 + | cell surface receptor IPT/TIG domain-containing protein TERM 2813 3708479 - 3708494 + G 79 -8.2 -4.25104 | opp_overlap 3708476 ACCCACAATGGAGCA GGCGCG GCGT TGCGCC TTTTGATCGACCGAC Rcas_2856 3707915 - 3709039 + | major facilitator transporter Rcas_2857 3709080 - 3710528 + | peptidase S41 TERM 2814 3710793 - 3710781 - f 78 -10.5 -3.889 | GCTAAGGACATGAAA GCCCC GCT GGGGC TTGCGAACCGGTCGC Rcas_2858 3710885 - 3711694 + | indole-3-glycerol-phosphate synthase Rcas_2859 3711731 - 3712171 + | hypothetical protein TERM 2815 3713385 - 3713405 + G 72 -4 -4.5493 | gap 1, opp_overlap 3713385, overlap 3713388 CCCGATGGAAACCTA CATCGACTG GATG CGGTCG-TG TTATTTTATTTCAAT Rcas_2860 3712168 - 3713601 + | amidase Rcas_2861 3713986 - 3714195 + | AbrB family transcriptional regulator Rcas_2863 3715253 - 3714771 - | response regulator receiver protein TERM 2816 3716174 - 3716150 - R 74 -11.4 -3.55444 | overlap 3716151 3716153 GGTGTAGGCGCCAAA GGAGCGCACG ATGTG CGTGCGCTCG GGGCCGGGGAGGCAA TERM 2817 3716173 - 3716151 - R 77 -14.9 -2.73124 | overlap 3716150 3716153 GTGTAGGCGCCAAAG GAGCGCACG ATGTG CGTGCGCTC GGGGCCGGGGAGGCA TERM 2818 3716384 - 3716356 - R 100 -21.9 -3.46602 | opp_overlap 3716359 GCCCGGACACCAGAA GTAGGGGCAAAGC GCC GCTTTGCCCCTAC TCATCGGGGTCGCTC Rcas_2866 3717692 - 3716862 - | integron integrase Rcas_2867 3718619 - 3718951 + | hypothetical protein Rcas_2869 3719327 - 3719641 + | hypothetical protein Rcas_2873 3721198 - 3723351 + | polymorphic outer membrane protein TERM 2819 3724225 - 3724180 - g 77 -12.5 -3.61715 | gap 1, overlap 3724182 CACCTTCTCCAACAA CAGCGCCGACGGCGGCGGCG GCGGCAT CGCCAACGCCGGC-ACGCTG ACGGTGACCAACAGC TERM 2820 3724221 - 3724182 - g 77 -13.4 -3.38812 | overlap 3724180 CCTTCTCCAACAACA GCGCCGACGGCGGCGGCG GCGG CATCGCCAACGCCGGCAC GCTGACGGTGACCAA Rcas_2874 3723455 - 3724693 + | polymorphic outer membrane protein Rcas_2875 3724683 - 3724988 + | hypothetical protein Rcas_2876 3724985 - 3725500 + | hypothetical protein Rcas_2877 3726585 - 3726037 - | hypothetical protein Rcas_2878 3726715 - 3728388 + | acyl-CoA dehydrogenase domain-containing protein TERM 2821 3730195 - 3730168 - g 84 -13.4 -3.68504 | overlap 3730160 3730186 GAAGAAAGCACAGAA GGCGGCAGGCTT CGAT AACCCCGCCGCC TGGAAAGCATTGCAG Rcas_2879 3728402 - 3737749 + | Beta-ketoacyl synthase TERM 2822 3738019 - 3738037 + G 70 -10.2 -3.61089 | opp_overlap 3738004, overlap 3738014 3738013 3738020 CTGGTCACCGGACGG CGTCCCGC GCT GCGGGACA TTGTCATTCTTACCG TERM 2823 3738020 - 3738036 + G 72 -13.7 -2.76171 | opp_overlap 3738004, overlap 3738019 3738014 3738013 TGGTCACCGGACGGC GTCCCGC GCT GCGGGAC ATTGTCATTCTTACC Rcas_2880 3737821 - 3738585 + | phosphopantetheinyl transferase-like protein TERM 2824 3738690 - 3738675 - g 91 -6 -5.31275 | opp_overlap 3738675 3738677, overlap 3738677 GCGCAGCACAAAAAA GGGCGG CTCA CCGCGC GTGAGCGCATCGACC TERM 2825 3738788 - 3738814 + G 73 -10.9 -3.58343 | gap 1, opp_overlap 3738783 CGGCGGAAAACGCTC CCGGT-ACGGCG ATGG CGTCGTCACCGG TTTCGGGCTGATCAA TERM 2826 3739937 - 3739919 - g 70 -10.2 -3.66732 | overlap 3739910 3739920 TAATGAGGTCAAGAA CGCCCCCG ACC CGGAGGCA AAGCGCCGCGAACTG Rcas_2881 3738582 - 3740126 + | carboxyl transferase TERM 2827 3740971 - 3740982 + G 93 -7.2 -5.07652 | overlap 3740942 3740941 GAGTTCGTGCTCGAC GCGC AGGG GCGC TTTTATTTTACCGAG Rcas_2882 3740137 - 3741618 + | carbamoyl-phosphate synthase L chain ATP-binding Rcas_2883 3741630 - 3742124 + | biotin/lipoyl attachment domain-containing protein TERM 2828 3742295 - 3742252 - f 93 -16 -3.59979 | gap 1, opp_overlap 3742256, overlap 3742256 TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGCTTTG CTCGGGGTGACCATG TERM 2829 3742256 - 3742291 + F 95 -15.4 -3.73775 | gap 1, opp_overlap 3742256 3742252 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC TTTGCTCGGGGTGAC TERM 2830 3742291 - 3742256 - f 88 -19.8 -2.65354 | gap 1, opp_overlap 3742256, overlap 3742252 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC TTTGCTCGGGGTGAC TERM 2831 3743434 - 3743397 - f 78 -10.5 -3.86202 | opp_overlap 3743404, overlap 3743404 TCTTACTATACCAAA GCGGAAAGGACCGCCAC GCCT GTGGCGGTCCTCTGTCC AGGCAAAGAAGGAAG TERM 2832 3743404 - 3743427 + F 86 -18.2 -2.87132 | opp_overlap 3743397 3743404 ATACCAAAGCGGAAA GGACCGCCAC GCCT GTGGCGGTCC TCTGTCCAGGCAAAG TERM 2833 3743427 - 3743404 - f 100 -18.2 -3.73509 | opp_overlap 3743404, overlap 3743397 ATACCAAAGCGGAAA GGACCGCCAC GCCT GTGGCGGTCC TCTGTCCAGGCAAAG Rcas_2884 3743533 - 3743697 + | YcfA family protein Rcas_2885 3743704 - 3744117 + | hypothetical protein TERM 2834 3744474 - 3744448 - g 78 -6.7 -4.67353 | TGATCGAGGCAAAAA GTTCCAATACT ATCGG AGTATCGAAAC CGTCCAGGAGTACAT Rcas_2886 3744098 - 3744670 + | hypothetical protein Rcas_2887 3745732 - 3744677 - | RpoD family RNA polymerase sigma factor Rcas_2888 3747082 - 3745802 - | hypothetical protein Rcas_2889 3748485 - 3747091 - | tRNA modification GTPase TrmE TERM 2835 3748602 - 3748618 + r 100 -9.4 -4.74103 | GGTCGCTTCACAGGT GAGCCG GGTGA CGGCTC TTTTTGCCTTCGGCA Rcas_2890 3750160 - 3748787 - | response regulator receiver protein Rcas_2891 3750232 - 3751221 + | dihydrodipicolinate reductase Rcas_2892 3752005 - 3751226 - | hypothetical protein Rcas_2893 3754357 - 3752933 - | PUCC protein TERM 2836 3753363 - 3753351 - G 78 -10.5 -3.97308 | ACCAGAAAACCCAAA GCGCC AAC GGCGC ATCCACCAATTATCA TERM 2837 3754020 - 3754007 - G 74 -5.9 -4.46615 | overlap 3754008 CAGGATCAACGAAAA CGGCG CGGT CGCCA GACCGCCATACGTCA Rcas_2894 3755922 - 3754474 - | cyclic nucleotide-binding protein Rcas_2895 3756525 - 3755929 - | hypothetical protein Rcas_2896 3756567 - 3758597 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2838 3758710 - 3758681 - T 100 -17.3 -4.63486 | opp_overlap 3758679 3758676 3758683 ATGCTGTGAACAAAA CAGGGATTGCGTT GTAT AACGCAACCCCTG TCTCCGTTTGGTGAC Rcas_2897 3759771 - 3758833 - | ROK family protein TERM 2839 3759528 - 3759473 - G 76 -11.1 -3.76492 | gap 1, opp_overlap 3759478 3759484, overlap 3759474 GGCAATCCCAGCAAA GCCTCGATGCGCGCCGCCAG-CGGCA TCTGT TCCCATCCGGCGACGTGCATCGAGAA ACGCACCGTGCGTCC TERM 2840 3759527 - 3759474 - G 77 -14.6 -2.85574 | gap 1, opp_overlap 3759478 3759484, overlap 3759473 GCAATCCCAGCAAAG CCTCGATGCGCGCCGCCAG-CGGCA TCTGT TCCCATCCGGCGACGTGCATCGAGA AACGCACCGTGCGTC TERM 2841 3759602 - 3759569 - G 78 -10.3 -4.07687 | gap 1, overlap 3759570 3759573 ACCGGTCCGCCAAAA CTGACGCCAACGCC CTGAACC GGCGCTGGCGCC-G AATCCATCAATTCGC Rcas_2898 3760334 - 3759768 - | sugar isomerase (SIS) Rcas_2899 3760606 - 3761154 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein Rcas_2900 3761205 - 3762386 + | exodeoxyribonuclease VII, large subunit Rcas_2901 3762608 - 3762850 + | exonuclease VII small subunit Rcas_2902 3762847 - 3764721 + | hypothetical protein Rcas_2903 3765877 - 3764954 - | auxin efflux carrier Rcas_2904 3767637 - 3765982 - | spermidine synthase-like protein TERM 2842 3767575 - 3767548 - G 77 -4 -4.87273 | opp_overlap 3767569 3767571, overlap 3767550 AACACCGCACAAAAA GACCGTACCCGC CAGC ACGGATGCGGTG CGCGGCGCCGTATTT Rcas_2905 3768009 - 3767752 - | protein of unknown function YGGT Rcas_2906 3769506 - 3768163 - | histidinol dehydrogenase Rcas_2907 3770522 - 3769506 - | ATP phosphoribosyltransferase Rcas_2908 3771073 - 3770522 - | hypothetical protein Rcas_2909 3772013 - 3771081 - | hypothetical protein Rcas_2910 3772821 - 3772024 - | hypothetical protein Rcas_2911 3774151 - 3772892 - | hypothetical protein TERM 2843 3773780 - 3773766 - G 77 -2.7 -5.04325 | overlap 3773767 3773768 TTGAAATGATAAAAA CCGCG CATAC CGCGC ACCGTGTAGGCGAGA Rcas_2912 3775104 - 3774148 - | ATPase Rcas_2913 3775701 - 3775120 - | hypothetical protein TERM 2844 3775271 - 3775252 - G 81 -10 -4.15044 | overlap 3775260 GCCGGCGCGAAGAAA CGCCACAA CGTC CTGTGGCG CGTCGATGGCGCCGG Rcas_2914 3776890 - 3776015 - | hypothetical protein Rcas_2915 3778348 - 3776894 - | histidyl-tRNA synthetase Rcas_2916 3780179 - 3778449 - | integral membrane sensor signal transduction histidine kinase TERM 2845 3779832 - 3779796 - G 70 -7.2 -4.06384 | overlap 3779800 GCCCAACACGAGAAA GGTACTGACGATCACC TGCCC GATGATCGGCAGATCC GGTCGCGCATTGGGC TERM 2846 3780531 - 3780572 + G 86 -12.9 -4.07885 | gap 1, overlap 3780532 GGCGGGCCGTCAATC TGCAACGCGCGGCGCGCGCG ATC TGCGCGCGCTACG-GTGGCG TTTTCCCACGGGATG TERM 2847 3780532 - 3780571 + G 78 -14.2 -3.04517 | gap 1, overlap 3780531 GCGGGCCGTCAATCT GCAACGCGCGGCGCGCGCG ATC TGCGCGCGCTACG-GTGGC GTTTTCCCACGGGAT Rcas_2917 3780227 - 3781180 + | HhH-GPD family protein Rcas_2918 3781214 - 3782251 + | histone deacetylase superfamily protein Rcas_2919 3782337 - 3782960 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 2848 3783536 - 3783495 - g 70 -11.6 -3.14878 | gap 2, opp_overlap 3783495, overlap 3783493 TTTCTGAACCGAACA TCGC-GG-CAACCGGGGCGC TCGT GCGCCCCGATGGTCCTGCAA TTATTGCATCGGGAG Rcas_2920 3782960 - 3783673 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Rcas_2921 3783683 - 3784789 + | hypothetical protein Rcas_2922 3784819 - 3785595 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 2849 3785912 - 3785926 + G 72 -7.8 -4.1552 | CACACCCTGCGCGAC GGCGAT GAA GTCGCC TTTATTCCGCCGGTG TERM 2850 3786122 - 3786084 - g 70 -8 -4.07568 | opp_overlap 3786071 TTGGCGGGCGCAAAA CCGCCTTCCTGGAATATG AGG CGTATCCCGGTATGGCGG AAGCGGTGCTCGCAC Rcas_2923 3785696 - 3786409 + | molybdopterin converting factor, subunit 1 Rcas_2924 3788025 - 3786391 - | hypothetical protein TERM 2851 3786863 - 3786846 - G 72 -4.2 -4.57569 | TCACTGCTGCAAAAA TGGTAA AGATTG TTACCA GAAGCGCAAACCGCG TERM 2852 3787745 - 3787718 - G 84 -11.3 -4.11216 | gap 1, overlap 3787693 CGCCCACGCGCAAAA CTG-GCCGGCGC GAGGG ACGCCGGCTCAG GCGGGAATCCATTCA Rcas_2925 3789488 - 3788091 - | hypothetical protein TERM 2853 3790150 - 3790124 - R 79 -12.3 -3.4811 | gap 1, opp_overlap 3790108 3790123, overlap 3790122 3790126 GCGCCGATAACAATA CA-GGCGGCGCC TTTC GACGCCGCCATG ATGATTCCAAAGGCA TERM 2854 3790147 - 3790126 - R 86 -15.1 -3.31208 | opp_overlap 3790108 3790123, overlap 3790124 3790122 GCCGATAACAATACA GGCGGCGCC TTTC GACGCCGCC ATGATGATTCCAAAG Rcas_2926 3790826 - 3790230 - | hypothetical protein TERM 2855 3791055 - 3791030 - H 80 -14.7 -3.04144 | opp_overlap 3791028 3791025 3791033 TTCCCACGCTCAACA CCATCCCCGCC ATCC GTCGGGGATGG TATCCGTTCTGGGGA TERM 2856 3791773 - 3791750 - g 71 -13.8 -2.52623 | overlap 3791749 3791747 CTTCGGCGAGAAGAT GGCGCGCGCT GCGG AGCGCGCGGC GACGCTCGGCATTCC Rcas_2927 3791235 - 3792221 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Rcas_2928 3792242 - 3793072 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Rcas_2929 3793352 - 3797041 + | short-chain dehydrogenase/reductase SDR Rcas_2930 3797073 - 3802811 + | AMP-dependent synthetase and ligase TERM 2857 3803674 - 3803651 - g 72 -7.4 -4.19953 | gap 1, opp_overlap 3803665 TATCCAACGTCAAAA GCCGAA-GCGG AAG CGGCGTTCGGC AATAGCGCCTTGCTC Rcas_2931 3803096 - 3804460 + | acetyl-CoA carboxylase, biotin carboxylase TERM 2858 3805281 - 3805322 + G 83 -14.3 -3.53761 | overlap 3805282 CGCTGGCGCGACGCT GCGGGCTGCCGGTTTCGCT CGTG AGCGGATCCGGCGGCAGGC TTTCCGAGGCGCTTG Rcas_2932 3804665 - 3806212 + | aldehyde dehydrogenase TERM 2859 3806340 - 3806324 - g 71 -5.7 -4.2828 | opp_overlap 3806326 GCTGACCCAGGAAAA CGGCGCG ATC CACGCTG AGTTCCGCCAACTGA Rcas_2933 3806277 - 3807275 + | quinone oxidoreductase putative YhdH/YhfP TERM 2860 3808210 - 3808254 + G 77 -13.6 -3.25823 | gap 1, opp_overlap 3808207, overlap 3808214 3808217 CAACCCAACCAACTG CGGACGCCGTAACCGCCG-CA GGGC TGACGGCGGTTGCGTGGTTCG TTCGTGTGGCGGGAA TERM 2861 3808217 - 3808247 + G 74 -14.1 -2.8661 | gap 1, opp_overlap 3808207, overlap 3808214 3808210 ACCAACTGCGGACGC CGTAACCGCCG-CA GGGC TGACGGCGGTTGCG TGGTTCGTTCGTGTG Rcas_2934 3807315 - 3809417 + | hypothetical protein Rcas_2935 3811498 - 3809423 - | peptidase S41 TERM 2862 3809884 - 3809898 + g 73 -12.8 -3.22102 | overlap 3809882 ACCCTGCCAGTCCCA GCGGCG CAC CGCCGC TATTCTGCCGCATGT Rcas_2937 3813583 - 3812771 - | periplasmic binding protein TERM 2863 3813519 - 3813466 - G 74 -13.3 -3.31144 | gap 2 CGGTCACTGCTACAA CGCGCGCGCCGAGCCCGACATCGAA GAGCCA TTC-A-GTCAGACTCGGCACGAGCG ACACAATGCGCTGCG Rcas_2938 3814124 - 3813729 - | thioesterase superfamily protein Rcas_2939 3815014 - 3814121 - | periplasmic binding protein Rcas_2940 3815256 - 3816203 + | chaperone DnaJ domain-containing protein TERM 2864 3816252 - 3816198 - f 91 -6.3 -5.40474 | gap 2, opp_overlap 3816206 3816207, overlap 3816199 3816200 AGCGCCCGAAAAAAA GGGTGACCGGCGCACCGGCGCGTATTG TGT CGTCACGC-CCGGCA-GCCGGTCACAT CTGGATGATCGTTCT TERM 2865 3816251 - 3816199 - f 76 -9.8 -3.83561 | gap 2, opp_overlap 3816206 3816207, overlap 3816198 3816200 GCGCCCGAAAAAAAG GGTGACCGGCGCACCGGCGCGTATTG TGT CGTCACGC-CCGGCA-GCCGGTCACA TCTGGATGATCGTTC TERM 2866 3816250 - 3816200 - f 75 -13.3 -2.89655 | gap 2, opp_overlap 3816206 3816207, overlap 3816199 3816198 CGCCCGAAAAAAAGG GTGACCGGCGCACCGGCGCGTATTG TGT CGTCACGC-CCGGCA-GCCGGTCAC ATCTGGATGATCGTT TERM 2867 3816424 - 3816466 + F 90 -14.9 -3.59979 | overlap 3816425 3816427 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2868 3816425 - 3816465 + F 86 -18.4 -2.75844 | overlap 3816424 3816427 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2869 3816427 - 3816462 + F 88 -19.8 -2.65354 | gap 1, overlap 3816425 3816424 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_2941 3816548 - 3816874 + | hypothetical protein TERM 2870 3817497 - 3817519 + G 79 -13.4 -3.44527 | overlap 3817473 3817472 GGCGTGGTGGGCGCA TGCCGGCGGT TTC GTCGCCGGCA TTGTACTCGTGGGTC Rcas_2942 3816898 - 3817593 + | rhomboid family protein Rcas_2943 3817609 - 3818448 + | hypothetical protein Rcas_2944 3819227 - 3818850 - | hypothetical protein Rcas_2945 3820496 - 3819276 - | cobalamin synthesis protein P47K TERM 2871 3819867 - 3819843 - G 75 -12.1 -3.59262 | CGGCACACGCCCAAA CGACGCGCGCA CAA TGCGGGCATCG GGGTTCAGTTTGCGC TERM 2872 3820801 - 3820759 - H 73 -10.5 -3.59979 | overlap 3820760 3820763 TTCGCTCAGGGTAAA CGCAGCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GCT GATCGGGGTGACCAT TERM 2873 3820800 - 3820760 - H 73 -14 -2.75844 | overlap 3820759 3820763 TCGCTCAGGGTAAAC GCAGCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC-GC TGATCGGGGTGACCA TERM 2874 3820798 - 3820763 - H 78 -15.4 -2.65354 | gap 1, overlap 3820760 3820759 CTCAGGGTAAACGCA GCGCGGAATCG-GCGCG GGT CGCGCACGACCCCTCGC GCTGATCGGGGTGAC Rcas_2946 3821430 - 3823481 + | Ig family protein TERM 2875 3823521 - 3823572 + T 95 -15.2 -4.13767 | opp_overlap 3823509 3823529 3823537, overlap 3823527 3823528 CAGGACGCATCTGAA TGACGATACGCCAGAATGCTGCTG ATAC CAGCAGCATTCTGGCGCGTTTACG TTTTGCGATCAAGCG TERM 2876 3823527 - 3823566 + T 100 -21.6 -3.93061 | opp_overlap 3823509 3823529 3823537, overlap 3823521 3823528 GCATCTGAATGACGA TACGCCAGAATGCTGCTG ATAC CAGCAGCATTCTGGCGCG TTTACGTTTTGCGAT TERM 2877 3823528 - 3823565 + T 100 -22.9 -2.95113 | opp_overlap 3823509 3823529 3823537, overlap 3823527 3823521 CATCTGAATGACGAT ACGCCAGAATGCTGCTG ATAC CAGCAGCATTCTGGCGC GTTTACGTTTTGCGA TERM 2878 3823564 - 3823529 - T 100 -26.4 -2.86343 | opp_overlap 3823528 3823527 3823521, overlap 3823509 3823537 ATCTGAATGACGATA CGCCAGAATGCTGCTG ATAC CAGCAGCATTCTGGCG CGTTTACGTTTTGCG TERM 2879 3823556 - 3823537 - T 76 -12.2 -3.35438 | opp_overlap 3823528 3823527 3823521, overlap 3823529 GACGATACGCCAGAA TGCTGCTG ATAC CAGCAGCA TTCTGGCGCGTTTAC Rcas_2947 3824166 - 3823663 - | glutathione peroxidase Rcas_2948 3824316 - 3824558 + | FmdB family regulatory protein Rcas_2949 3824589 - 3825698 + | cobalamin synthesis protein P47K Rcas_2950 3829002 - 3826018 - | hypothetical protein TERM 2880 3827124 - 3827110 - G 95 -10 -4.41616 | overlap 3827115 ATCGGCTGAAACAAA CCGAAC GTA GTTCGG CCACGAAACCCGGTT TERM 2881 3827350 - 3827337 - G 72 -2.3 -4.78107 | opp_overlap 3827337 CATTATGACTAAAAA TGCCC AAAA GGGTA TTTATCGGGCGAATC Rcas_2951 3830674 - 3830423 - | hypothetical protein Rcas_2952 3830981 - 3830685 - | hypothetical protein Rcas_2954 3833348 - 3831291 - | biotin/lipoyl attachment domain-containing protein Rcas_2955 3834811 - 3833357 - | carbamoyl-phosphate synthase L chain ATP-binding TERM 2882 3835258 - 3835312 + r 71 -7.8 -4.07455 | opp_overlap 3835265 3835268, overlap 3835269 TACGCTGAATCTGGC GCCATAAGATGCCACAGCCCCGAT CCTTTCA AACGGGACTGTGGTGTCTTGAGCC TTTCTGATGTTGGTG TERM 2883 3835347 - 3835369 + r 74 -5.5 -4.56597 | gap 1 AGACGGGACTCGAAC CCGTACGGGG TTGC CCCCAT-CGG TTTTTAAGACCGAAG Rcas_2956 3835989 - 3835558 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 2884 3836186 - 3836156 - H 70 -3.8 -4.58663 | opp_overlap 3836169, overlap 3836158 3836160 ATGACCGTTCAAAAA CCCATCCGGCAG ACCTGCG CCGCCGGGCGCG CGTCCTCTGAGCAGC TERM 2885 3836243 - 3836231 - H 78 -10.5 -3.86202 | opp_overlap 3836210 GCTCAGCACATGAAA GCCCC GCA GGGGC TTCCCCCTCCACAGC Rcas_2957 3836383 - 3837570 + | glycosyl transferase group 1 TERM 2886 3837650 - 3837692 + F 100 -20.7 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGCG TTTACCCTGAGCGAA Rcas_2958 3838009 - 3839109 + | glycosyl transferase group 1 Rcas_2959 3839281 - 3840177 + | peptidase C60 sortase A and B TERM 2887 3840429 - 3840417 - g 83 -4.8 -4.99043 | CCCGGAGAAAGAAAA GGCT CTGGC AGCC GCTATGAGCCAGATC TERM 2888 3841346 - 3841332 - g 74 -5.6 -4.4078 | GTTCCTGAACGAAAA TCCGGC GCT GGCGGA TGAGATCGAGCGCCT Rcas_2960 3840391 - 3841452 + | recA protein TERM 2889 3842167 - 3842138 - g 90 -13.5 -4.00868 | overlap 3842153 TGACCGACAATGAAA CGGCGCGCGCC GAAACGCT GGCGCGCGCGG CAATGCGGCGTTACG TERM 2890 3842188 - 3842153 - g 76 -13.2 -3.53012 | gap 1, overlap 3842138 CGGCGCGCGCCGAAA CGCTGGCGC-GCGCGGC AAT GCGGCGTTACGCCAGCG TCGCCGACTACCAGA Rcas_2961 3841660 - 3842343 + | regulatory protein RecX Rcas_2962 3842363 - 3843025 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein TERM 2891 3843140 - 3843171 + F 93 -16.7 -3.39908 | opp_overlap 3843135, overlap 3843138 3843136 TTCGATACGAGTCTC TTGAGGGGAAGGC AGCACC GCCTTCCCCTCGA TCTATTTTCCCGCAG Rcas_2963 3843245 - 3844912 + | CTP synthetase TERM 2892 3845444 - 3845402 - f 100 -17.1 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CACGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT Rcas_2965 3845860 - 3846279 + | hypothetical protein Rcas_2966 3846842 - 3847738 + | hypothetical protein Rcas_2967 3850667 - 3847935 - | phosphoenolpyruvate carboxylase TERM 2893 3848009 - 3847985 - G 85 -15.7 -3.45023 | opp_overlap 3847985 TGATCAGCAGCAGAA GCAGGCGCAGC TGC GCTTCGCCTGC TTCTGGATCGAGGTT TERM 2894 3847985 - 3848009 + g 84 -15.7 -3.36175 | opp_overlap 3847985 TGATCAGCAGCAGAA GCAGGCGCAGC TGC GCTTCGCCTGC TTCTGGATCGAGGTT TERM 2895 3848581 - 3848563 - G 78 -5.2 -4.74539 | AAGAACGGAAGAAAA CGCTCATG CTC CACCAGCG CGCGATATGCTCGCT Rcas_2968 3852279 - 3850702 - | 4-alpha-glucanotransferase Rcas_2969 3852395 - 3854119 + | hypothetical protein TERM 2896 3854323 - 3854342 + G 76 -5.6 -4.55287 | GTCACGCTCACCATG GCAGTGCC GGAC GGTACGGC TTTTGTGTCGCTCAC Rcas_2970 3854116 - 3854619 + | hypothetical protein TERM 2897 3854807 - 3854837 + F 100 -23.4 -2.97188 | overlap 3854810 ATGATGACTGGACCG GAGGCCGCCTGAGC GAT GCTCAGGCGGCTTC TCTATGCTACTATAG TERM 2898 3854810 - 3854834 + F 100 -21.5 -3.62616 | overlap 3854807 ATGACTGGACCGGAG GCCGCCTGAGC GAT GCTCAGGCGGC TTCTCTATGCTACTA Rcas_2971 3854884 - 3856116 + | cysteine desulfurase family protein TERM 2899 3856621 - 3856585 - f 76 -15 -2.52786 | opp_overlap 3856586, overlap 3856584 3856582 ATAGGATATGAAGAG GGCGCGGCTCCTCCCG GCATA CTGGAGGGGCCGCGCT ATGTCTCTCTAGATG TERM 2900 3856586 - 3856620 + F 95 -20.7 -3.08465 | opp_overlap 3856585 3856584 3856582 TAGGATATGAAGAGG GCGCGGCTCCTCCCG GCATA CTGGAGGGGCCGCGC TATGTCTCTCTAGAT TERM 2901 3857480 - 3857529 + G 72 -12.1 -3.38786 | overlap 3857525 GCAACTACTCCGGCG TGATCTGGCGGCTGCGCTTGATC GCCT GAATGAGCGCGAACGCCGGATCA TTGATCTTCGCTATG Rcas_2972 3856647 - 3857693 + | RpoD family RNA polymerase sigma factor TERM 2902 3857707 - 3857731 + F 91 -7.8 -4.82901 | gap 1, overlap 3857709 AGGACGCTGGTTGTT G-CGCCCCCTC TTCC GAGGGGGCTTC TTTTTGTCGCCGGGC TERM 2903 3857709 - 3857728 + F 100 -15 -4.52873 | overlap 3857707 GACGCTGGTTGTTGC GCCCCCTC TTCC GAGGGGGC TTCTTTTTGTCGCCG Rcas_2975 3858579 - 3860228 + | O-antigen polymerase Rcas_2976 3860698 - 3860249 - | PilT domain-containing protein Rcas_2977 3860888 - 3860676 - | hypothetical protein Rcas_2978 3862975 - 3860978 - | excinuclease ABC, C subunit TERM 2904 3864414 - 3864398 - g 76 -13.7 -3.14931 | GTTATCCGCTACGAA GGACCGC GCG GCGGTCC TGGCATGCGTGAGAT Rcas_2979 3863087 - 3864766 + | dihydroxy-acid dehydratase Rcas_2980 3865611 - 3864907 - | ribose 5-phosphate isomerase Rcas_2981 3865999 - 3865625 - | hypothetical protein Rcas_2982 3866596 - 3866003 - | electron transport protein SCO1/SenC Rcas_2983 3866866 - 3867240 + | ferredoxin TERM 2905 3867779 - 3867744 - T 72 -2.7 -4.82901 | gap 3, opp_overlap 3867754, overlap 3867747 3867748 TGTTCGTGAGAAAAA TG-ACCTGCTGCCAGCGC CTC GCGC-AGCAA-AGGTGCA GGGTTGTGTGTGCGC Rcas_2984 3870895 - 3868307 - | helicase superfamily protein TERM 2906 3869371 - 3869388 + g 76 -12.7 -3.41878 | opp_overlap 3869366 CGCCAGCATACGCCG CGCGACC GTCC GGTCGCG TTGTCACTTCGCCGC TERM 2907 3870343 - 3870332 - G 70 -7.2 -3.99592 | ATCGAGGACGACAAA GCGC AACT GCGC CAGAACGCTCTGCCA TERM 2908 3871691 - 3871657 - g 73 -11.3 -3.63627 | gap 1, overlap 3871630 CGCTGACACTGCAAA GC-CGCCTCCGCGCCG CCAA CGGCGCGATGCCGCGC ACACTCAGCGAGTAT Rcas_2985 3871146 - 3871895 + | hypothetical protein TERM 2909 3872268 - 3872248 - f 74 -12.5 -3.14564 | CGACGCCCCCAGTAA GGGCGGGTC TCA GACCCGACC CGATGCCCCGACGCC TERM 2910 3872320 - 3872300 - f 90 -18.3 -3.14564 | CGACGCCCCCAGTAA GGGCGGGTC TCA GACCCGCCC CGACGCCCCCAACGC TERM 2911 3872499 - 3872479 - f 90 -18.3 -3.14564 | CGACGCCCCCAGTAA GGGCGGGTC TCA GACCCGCCC CGAAGCGACGACTCG TERM 2912 3872919 - 3872948 + G 85 -14.3 -3.63782 | gap 1, opp_overlap 3872909 3872894 GAACACGCAGCGCGC GTGCTACGCG-CGC TTG GCGTCGCGCAGCAC TTTCCGCTCATCTTC Rcas_2986 3872571 - 3873224 + | pyrimidine 5'-nucleotidase TERM 2913 3873272 - 3873230 - T 89 -16.2 -3.35992 | ACGGATCTGAATGAA CCCCGCGTAGGGAGCAGGGC TGA GACCTGCCCCCTACTGGGAG CAGGGCTGAGACCTG Rcas_2987 3874248 - 3873301 - | band 7 protein TERM 2914 3874322 - 3874294 - H 89 -17.5 -3.24747 | opp_overlap 3874297 3874298, overlap 3874298 GTTTCATATGACGAA GAAACCCGGAGAG AAA CCCTCCGGGCTTC TATCCACGACACCAT TERM 2915 3874318 - 3874298 - H 100 -14.7 -4.28111 | opp_overlap 3874297 3874298, overlap 3874294 CATATGACGAAGAAA CCCGGAGAG AAA CCCTCCGGG CTTCTATCCACGACA Rcas_2988 3874745 - 3876472 + | polymorphic outer membrane protein Rcas_2989 3876876 - 3876487 - | hypothetical protein Rcas_2990 3878978 - 3876888 - | hypothetical protein TERM 2916 3877687 - 3877658 - G 74 -13.5 -2.85216 | overlap 3877655 3877674 CACGATCCAGAACTA TGGCGCCAAGCGC AAAC GCGCGCAGCGCCA TGCCATTCCAGGCGG TERM 2917 3877923 - 3877907 - G 81 -4.4 -5.06103 | gap 1 ACAACGCTGAAAAAA CGGTTGC GTCC GCA-CCG AGCGCCTCGCGGATC TERM 2918 3878661 - 3878631 - G 71 -8.2 -3.87075 | ATCAGGCGTCAGAAA GACCGTCATCGG CCAGCCT CCGCTGCCGGTC ATCGCCTGAACCGCT Rcas_2991 3879161 - 3879652 + | hypothetical protein TERM 2919 3879826 - 3879812 - f 79 -12.8 -3.53563 | opp_overlap 3879825 AGATGTTCGCCGAAA CGCCGG ATG CCGGCG ATCAATCACCGCTCG TERM 2920 3880125 - 3880168 + G 70 -8 -4.08945 | gap 1, overlap 3880127 GGAAATCCACCTTCC GCCGGTTC-GGACGCTCTCCG CTT CGGATCGCGTACAGAGCCGTC TTTTGCCCGCATCAT TERM 2921 3880739 - 3880750 + G 100 -7.2 -5.53288 | opp_overlap 3880739 TCCCCGAGTCAGCAA CCGC CAAA GCGG TTTTTTTCGATTCGC Rcas_2992 3879913 - 3881607 + | proline--tRNA ligase Rcas_2993 3882761 - 3881709 - | putative RNA methylase TERM 2922 3882082 - 3882064 - G 80 -16 -2.62184 | GCCGCTTCCAGATTA CGCTGCGC GCA GCGCAGCG CTTCCCGATCTAGAT TERM 2923 3882817 - 3882784 - H 100 -20.5 -5.46657 | opp_overlap 3882789 3882807 GACGGGAATAAAAAA GTACAGGCGTGCACA TCAT TGTACACGCCTGTAC TCGCCAACAGGTGGT TERM 2924 3883534 - 3883550 + H 70 -5.1 -4.49337 | overlap 3883544 GGGCACGATCAGCCT GTTATCC CCG GGGTAGC TTTTATCCGTTATGC TERM 2925 3885690 - 3885723 + H 78 -16 -2.52464 | gap 1 TCGCCCGGGTGCGAC GCGC-GCGGGGGGGT CGGCA GTCCCCCCGCAGCGC TCCCTTCAACCCCAC TERM 2926 3887105 - 3887125 + H 70 -10.3 -3.53224 | overlap 3887106 TAGTTTGCCATGACC TCCCCCGGT TGA GCCGGGGGC TTTCACACGACACTG TERM 2927 3887106 - 3887124 + H 73 -13.8 -2.71791 | overlap 3887105 AGTTTGCCATGACCT CCCCCGGT TGA GCCGGGGG CTTTCACACGACACT TERM 2928 3887817 - 3887783 - H 100 -8.5 -5.24129 | gap 1 GCGGGCGACAAAAAA CCAGG-CGGTCGCACC TTGC GGCTGGACCGACCTGG CGACAGTGGTTGCGC TERM 2929 3887874 - 3887893 + H 75 -7.8 -4.25256 | overlap 3887864 CTATTCGCTCACGGG CGCGTCTC TCCA GAGACGGG TTGTTTTCGTACAGA TERM 2930 3887974 - 3887988 + H 95 -12.8 -4.19177 | GTTATCTTTGAGCGT CGCCGC AGT GCGGCG TTTCTCTTGACAGGT Rcas_2994 3888161 - 3889456 + | monogalactosyldiacylglycerol synthase Rcas_2995 3889951 - 3890433 + | PDZ/DHR/GLGF domain-containing protein Rcas_2996 3890430 - 3891059 + | hypothetical protein TERM 2931 3891681 - 3891717 + G 73 -10.7 -3.56643 | TTGTGAGTCGCAGTC CCGGTTGGCGCGAGATG GCG CCGCTGGCGGCAACCGG TTTCCGCGATGTGAC Rcas_2997 3891056 - 3892042 + | prephenate dehydrogenase Rcas_2998 3892054 - 3892458 + | cobalamin B12-binding domain-containing protein Rcas_2999 3892463 - 3893413 + | LAO/AO transport system ATPase Rcas_3000 3893518 - 3894036 + | metal dependent phosphohydrolase Rcas_3001 3895193 - 3894042 - | GntR family transcriptional regulator TERM 2932 3894293 - 3894256 - G 95 -10.6 -4.46514 | gap 1 ACCCATTGAAAGAAA CCGCCGCCGGGCACG GTACAATGG CAT-CCCGGCGGCAG GTAATCACGCAGACC Rcas_3002 3899092 - 3895388 - | multi-sensor hybrid histidine kinase TERM 2933 3898882 - 3898869 - G 74 -2.3 -4.83169 | AGCGCCTGATAAAAA CGCAC CCGC GTCCG ATCATCGATGTCCGC TERM 2934 3899860 - 3899844 - g 72 -2.2 -4.7373 | overlap 3899846 3899853 CGATCTGACCAAAAA GTTCGA ACACG TCGAGC GCGGGACGCTCGCGC Rcas_3003 3899281 - 3899979 + | uroporphyrin-III C/tetrapyrrole methyltransferase Rcas_3004 3900122 - 3900799 + | hypothetical protein Rcas_3005 3902212 - 3900803 - | aspartate kinase TERM 2935 3901752 - 3901734 - G 73 -8.2 -4.07568 | CGGGCGTTGCCAAAA TGATCGTC GGT GACAATCA ACTCAGCGCCATCGA TERM 2936 3902280 - 3902322 + r 88 -13.5 -3.59979 | overlap 3902281 3902283 ATGGTCACCTCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 2937 3902281 - 3902321 + r 84 -17 -2.75844 | overlap 3902280 3902283 TGGTCACCTCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 2938 3902283 - 3902318 + r 85 -18.4 -2.65354 | gap 1, overlap 3902281 3902280 GTCACCTCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_3006 3903301 - 3902372 - | methylenetetrahydrofolate reductase TERM 2939 3903126 - 3903106 - G 82 -11.1 -3.99374 | overlap 3903108 3903109 GTTGACGAATAATAA TACCGGCGC CGA GCGCCGACA TGCGCCCCAGCCCGC TERM 2940 3903124 - 3903108 - G 73 -11.5 -3.58505 | overlap 3903106 3903109 TGACGAATAATAATA CCGGCGC CGA GCGCCGA CATGCGCCCCAGCCC Rcas_3007 3904138 - 3903323 - | UspA domain-containing protein Rcas_3008 3905271 - 3904141 - | hypothetical protein Rcas_3009 3906158 - 3905253 - | beta-lactamase domain-containing protein Rcas_3010 3906580 - 3906239 - | hypothetical protein TERM 2941 3906434 - 3906411 - G 73 -11 -3.59315 | gap 1, opp_overlap 3906411, overlap 3906403 3906412 TGAATGATGCCGAAA TC-GGCGCCGG TCG CCAGCGCCAGA TTGAGTGCCGCAAAC Rcas_3011 3908460 - 3906682 - | methionyl-tRNA synthetase TERM 2942 3908561 - 3908535 - H 100 -13 -4.66938 | opp_overlap 3908534, overlap 3908530 ACCCTCAATACAAAA GCCGTGGGCG CTTTTGC CACCCACGGC CCGCATTCGTCAATA TERM 2943 3910527 - 3910511 - g 81 -6.5 -4.74801 | opp_overlap 3910510 CAACTTCAGGAAAAA CCGGC AAAGGCG GCCGG ATTGCTCGAAGACCG Rcas_3014 3910268 - 3910744 + | hypothetical protein Rcas_3015 3910731 - 3911159 + | DNA polymerase beta subunit Rcas_3016 3911152 - 3911547 + | hypothetical protein Rcas_3017 3911826 - 3912512 + | hypothetical protein Rcas_3018 3912513 - 3913685 + | hypothetical protein TERM 2944 3913769 - 3913799 + G 76 -10.2 -3.84266 | ATTGCGCACGCAGGG GCAGGAGGCGTGCG TTA CACGCGCCGCCAGC TTTACTATGAGGTGT TERM 2945 3914048 - 3914064 + G 74 -9.3 -3.90112 | opp_overlap 3914038, overlap 3914049 ATGTATCGCGCGCGT CACGGCG ATC CGCCGGG TTTGCTTCCCGACGA TERM 2946 3914167 - 3914191 + G 76 -9.9 -3.87815 | overlap 3914161 CTGCCAGGATGCGTC GATTGCGCGCA TGT TGCGCGCCAAC TTTCTGCACATGGAA TERM 2947 3914604 - 3914631 + G 74 -12 -3.50393 | gap 1 GCGAGTCCTGGTTCT CCGGT-CTGCGCC GAT GGCGCACCACCGG TTATATGAGCTGGCC Rcas_3019 3913694 - 3914653 + | hypothetical protein Rcas_3020 3914669 - 3915265 + | hypothetical protein Rcas_3021 3915262 - 3916992 + | asparagine synthase (glutamine-hydrolyzing) Rcas_3022 3917037 - 3918473 + | hypothetical protein TERM 2948 3918570 - 3918526 - T 70 -9.8 -3.45321 | opp_overlap 3918520, overlap 3918520 ACTGAGAACCGAGAA CGCGGTTGGCGTTGGCTGAG CCTGT CGAAGCCAACGCCGGTCGCG AAATCGTCTGATATC TERM 2949 3918710 - 3918675 - T 72 -14 -2.65354 | gap 1, overlap 3918672 3918671 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGATCGAGGTGAC Rcas_3023 3919584 - 3918757 - | hypothetical protein Rcas_3024 3920695 - 3919766 - | GCN5-related N-acetyltransferase Rcas_3025 3921028 - 3921843 + | hypothetical protein TERM 2950 3923786 - 3923769 - g 71 -5.5 -4.25056 | GAGGTGATGAAGAAA CTGGCAG ATCG CTGGCAG CCGGTGAATGGTCAC Rcas_3026 3922695 - 3923834 + | hypothetical protein TERM 2951 3923936 - 3923891 - f 73 -9.8 -3.59979 | gap 3 TTCGTTCAGGGTAAA CGCAGCGC--GGAATC-TGAGCG GGG CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC Rcas_3027 3924026 - 3924226 + | hypothetical protein Rcas_3028 3924498 - 3924223 - | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Rcas_3029 3925335 - 3924568 - | hypothetical protein TERM 2952 3925183 - 3925166 - G 72 -7.7 -4.18018 | gap 1, opp_overlap 3925165 GCGCGCCAGGGAAAA CGGTC-GC GCG GCAGACCG GTGTAGTCATCGATC TERM 2953 3925383 - 3925354 - R 100 -17.9 -3.95378 | GGATACCTGAAACAA CCACGCCCCCAGA TGGC TCCGGGGGCGTAG CCGCGCCACGGTCGG Rcas_3030 3927432 - 3925498 - | peptidase S9 prolyl oligopeptidase TERM 2954 3926966 - 3926927 - G 82 -6.2 -4.84359 | opp_overlap 3926930, overlap 3926928 3926929 GGATTCGCATAAAAA TCTGCGCCGCTGATCAGC ACGC GCTGTTCGGCAGCGCCAT CGAGCGAGATGGCGA Rcas_3031 3928705 - 3927464 - | hypothetical protein TERM 2955 3929880 - 3929916 + G 100 -18.6 -3.55801 | overlap 3929881 GGTGGTGCTGCTGGC GGCGGCGCGCGGCGGC GCGTG GCTGACGCGCGCCGCA TTTCGGCCAATTGAT TERM 2956 3929881 - 3929915 + G 100 -22.1 -2.73159 | overlap 3929880 GTGGTGCTGCTGGCG GCGGCGCGCGGCGGC GCGTG GCTGACGCGCGCCGC ATTTCGGCCAATTGA TERM 2957 3930047 - 3930083 + G 78 -7.1 -4.65078 | overlap 3930048 CGGTCAACGATCTGC TGGCGCGGTTGGAAGAA CTG TTCAACCATCAGCGCCG TTTTATTGCCGATGT Rcas_3032 3929299 - 3930828 + | integral membrane sensor signal transduction histidine kinase TERM 2958 3931009 - 3931045 + G 87 -18.7 -2.52464 | opp_overlap 3931033 3931034 TCGCCGGGTTGTTTA TCGTCGGCGCCGGATTG TTT CAAACCGGCGTCGCCGA TGCGTTGGGGCAGCA TERM 2959 3931314 - 3931340 + G 72 -4.3 -4.54727 | overlap 3931317 3931318 AGCAATCAATTGCAG GCAGCCGGACG CGCGC CGTTCGGGTTC TTTTCCTTTACGCCG Rcas_3033 3930825 - 3932663 + | citrate transporter Rcas_3034 3932686 - 3933771 + | hypothetical protein Rcas_3035 3933793 - 3934440 + | metallophosphoesterase Rcas_3036 3934440 - 3935408 + | hypothetical protein TERM 2960 3935868 - 3935898 + GT 80 -11.8 -3.75024 | opp_overlap 3935854, overlap 3935869 3935872 ACCCGGCTGGCTGGC AGGACCGGGCACAT GCC ATGCGCCCGGTTCG TTCTTCCTGCTCGGC TERM 2961 3935869 - 3935897 + GT 79 -15.3 -2.84693 | opp_overlap 3935854, overlap 3935868 3935872 CCCGGCTGGCTGGCA GGACCGGGCACAT GCC ATGCGCCCGGTTC GTTCTTCCTGCTCGG TERM 2962 3935872 - 3935894 + GT 88 -13.4 -3.56544 | opp_overlap 3935854, overlap 3935869 3935868 GGCTGGCTGGCAGGA CCGGGCACAT GCC ATGCGCCCGG TTCGTTCTTCCTGCT Rcas_3037 3935380 - 3936372 + | hypothetical protein Rcas_3039 3940060 - 3937649 - | hypothetical protein Rcas_3040 3941940 - 3940165 - | serine/threonine protein kinase with PASTA sensor(s) TERM 2963 3941038 - 3941079 + g 72 -12.1 -3.28712 | gap 1, overlap 3941038 TCGACTGGCGACGCT CC-CGGCCGGCGCCACTGCC ATC GGTCCCGGCGCCGGTCGCGG TTGTGACGAACGGGG TERM 2964 3941162 - 3941178 + g 83 -15.1 -3.17486 | opp_overlap 3941158, overlap 3941165 ATCTGCGCAAACTCG CGCCCCG ATG CGGGGCG TTCGTCGGGATTCTT Rcas_3041 3942453 - 3941947 - | exonuclease-like protein Rcas_3042 3942789 - 3943814 + | inosine/uridine-preferring nucleoside hydrolase TERM 2965 3944064 - 3944082 + G 78 -3.1 -5.08824 | gap 1, opp_overlap 3944036, overlap 3944068 CACCAATCCGCTGAC GGTCTGGC ATGC GCC-GATC TTTTTTCCATACCCG Rcas_3043 3943882 - 3946674 + | hypothetical protein Rcas_3044 3947729 - 3947010 - | ABC transporter related TERM 2966 3947979 - 3947961 - R 85 -9.5 -4.7173 | opp_overlap 3947961, overlap 3947953 CATGACACGCAAAAA GGAGCGC CTGAC GCGCCCC TTCTTGCTGCCGTGC Rcas_3045 3948616 - 3948008 - | hypothetical protein Rcas_3046 3950357 - 3948870 - | heat shock protein DnaJ domain-containing protein TERM 2967 3949866 - 3949843 - G 75 -3 -4.86001 | overlap 3949847 AGCAGGGCATAAAAA TCAACCGGCT CCGC AACCGGTGGT CCGGCGTCGGGCGGC TERM 2968 3949867 - 3949898 + g 72 -12.2 -3.28712 | gap 1 TCCGCAACCGGTGGT CCGGCGTCGGGCGGC GTG GCTGGC-GGCGCCGG TTCTCCCGGACGCAG Rcas_3047 3951187 - 3950360 - | FHA domain-containing protein TERM 2969 3950561 - 3950515 - G 100 -10.2 -5.06414 | gap 3 CGCCCTGAACAAAAA TCCGCGCGTGCCGCCGCCCGACC CCCT GATCGAGCG-CG-C-CGTGCGGA CCAAGATCAACATCA TERM 2970 3952070 - 3952036 - g 70 -12 -3.17219 | overlap 3952040 3952048 3952049 CAGAACTGGGACGAA GGCACGCGCAAAGCGT TTG ACGCCTGGCGCGAGAC GGTCAACAGCGCCAT TERM 2971 3952066 - 3952040 - g 74 -14.4 -2.56715 | overlap 3952036 3952048 3952049 ACTGGGACGAAGGCA CGCGCAAAGCGT TTG ACGCCTGGCGCG AGACGGTCAACAGCG Rcas_3048 3951658 - 3952146 + | hypothetical protein TERM 2972 3952617 - 3952663 + T 74 -12.4 -3.17392 | opp_overlap 3952617 3952619, overlap 3952601 GATGTGTGCGACACA CACCCTTATGGATGCGCAGA GACGACA TCTGCCTGCCCATAAGGGTG TTCGCTTGAAAACTA Rcas_3049 3953224 - 3952676 - | NUDIX hydrolase Rcas_3050 3953299 - 3954051 + | peptidase C26 Rcas_3051 3954907 - 3954029 - | GCN5-related N-acetyltransferase Rcas_3052 3956566 - 3954926 - | amidohydrolase 3 TERM 2973 3957325 - 3957370 + G 71 -14 -2.57564 | opp_overlap 3957313 3957311 3957316, overlap 3957324 ATAGCAGCGCGGGCG CGCGGCACGCCGCGCATC-GTC AATC GGCTGCTGCGCCGCGTGC-GCG ATTATGCCCAGGTCA Rcas_3053 3956680 - 3957723 + | Holliday junction DNA helicase B Rcas_3054 3958191 - 3957724 - | methionine-R-sulfoxide reductase TERM 2974 3958661 - 3958676 + G 83 -11.8 -4.09685 | GCGGCGGTCGATCTG GCGCCG GAAG CGGCGC TTTTCGGCGCTGAGC TERM 2975 3958837 - 3958852 + G 74 -10.4 -3.72324 | GACGTGGCGCGTGCT CCGTCC CGGC GGACGG TTGTTACTGCGCCTC Rcas_3055 3958427 - 3959203 + | methyltransferase type 11 TERM 2976 3959503 - 3959518 + G 71 -4.6 -4.42653 | overlap 3959504 ACAAACTTTCCGCCC ACCCAG GACT CTGGGG TTTTCTGCGTCGCGT Rcas_3056 3959469 - 3960140 + | methyltransferase type 11 TERM 2977 3960449 - 3960464 + GT 71 -8.2 -3.91897 | overlap 3960450 TGGTTGCCGACCTGA TCGGCG CCAG CGCCGG TTTCTGGCTCGCCAG Rcas_3058 3961803 - 3960736 - | hypothetical protein Rcas_3057 3960142 - 3960822 + | SNARE associated Golgi protein TERM 2978 3962157 - 3962175 + G 76 -5.9 -4.65895 | opp_overlap 3962157 CTACGATAATATGAA GTCGTGG GAATA CCTCGAC TTTTTCGGTCGCGCA Rcas_3059 3961879 - 3962865 + | ABC transporter related TERM 2979 3963578 - 3963606 + G 72 -7.4 -4.1711 | gap 1, overlap 3963567 GCACTCGGCGCTACG GCGTCG-CTCCTC TCGA GCGGAGGCGATGC TTTCTTCGAAGTCGT Rcas_3060 3962876 - 3963781 + | hypothetical protein Rcas_3061 3964828 - 3963791 - | hypothetical protein TERM 2980 3964861 - 3964872 + r 85 -5.8 -5.055 | GTGCCAGGTCGTACA TCGC CGCC GCGA TTTTTTGCGGATTGA Rcas_3062 3965821 - 3964838 - | transketolase central region Rcas_3063 3966903 - 3965902 - | pyruvate dehydrogenase (acetyl-transferring) Rcas_3064 3968571 - 3966937 - | GAF sensor signal transduction histidine kinase TERM 2981 3967167 - 3967186 + g 74 -10 -3.70853 | opp_overlap 3967153 TCACCACTTCGTCGG TGCGCGCA TGTT TGCGTGCA TTATTGACTGCTTCC Rcas_3065 3968910 - 3970412 + | FAD dependent oxidoreductase Rcas_3066 3970412 - 3971233 + | short-chain dehydrogenase/reductase SDR TERM 2982 3971505 - 3971535 + F 100 -16.1 -4.77896 | opp_overlap 3971505 TTGATGACAAACAAA GCCCTCATCCGCC TGGCT GGCGGTTGGGGGC TTTTTGCATTCCTTC TERM 2983 3971535 - 3971505 - f 100 -13.9 -4.59342 | opp_overlap 3971505 TTGATGACAAACAAA GCCCTCATCCGCC TGGCT GGCGGTTGGGGGC TTTTTGCATTCCTTC TERM 2984 3971750 - 3971693 - g 73 -3.6 -4.76041 | gap 3, overlap 3971694 CACATCGAGCAAAAA CTTTCACGCCTCGACCGTTACCTTGATCG GAT CGA-CAAAGTGACGGTCGAG-CAT-ATGG AAGAAATGCGACGCA Rcas_3067 3971609 - 3972205 + | sigma 54 modulation protein/ribosomal protein S30EA Rcas_3068 3973054 - 3972221 - | hypothetical protein TERM 2985 3972450 - 3972481 + g 73 -13 -3.21099 | gap 1, opp_overlap 3972448, overlap 3972451 ACCCGCCGCAAGAGT TCGGCATC-GAGGCG ATG CGCCACCGATGCCGG TTCATAGTGCGACAG TERM 2986 3972451 - 3972480 + g 74 -14.3 -2.52516 | gap 1, opp_overlap 3972448, overlap 3972450 CCCGCCGCAAGAGTT CGGCATC-GAGGCG ATG CGCCACCGATGCCG GTTCATAGTGCGACA TERM 2987 3973396 - 3973431 + H 74 -11.7 -3.53012 | CAGGCACACCCGCCA CGGGCAGGCGCGGGG ACCTGA CCCCACGCCGGTTCG TTTAAGGGCGGACAG Rcas_3069 3973705 - 3976053 + | hypothetical protein Rcas_3070 3977311 - 3976292 - | magnesium and cobalt transport protein CorA Rcas_3071 3977975 - 3977313 - | TrkA domain-containing protein Rcas_3072 3978635 - 3977991 - | TrkA domain-containing protein Rcas_3073 3979586 - 3978645 - | ornithine carbamoyltransferase TERM 2988 3978807 - 3978788 - G 70 -10.6 -3.54447 | opp_overlap 3978787 3978783, overlap 3978786 GACAGTGCATAAACA GCGCGCCC GACC GGGCGTGC GTCATTAGTGCGGCA Rcas_3074 3980216 - 3979650 - | hypothetical protein TERM 2989 3980726 - 3980709 - H 82 -11.3 -3.85698 | overlap 3980721 GTCCCTCTCCACAAA CGCGAGA TAAA TCTCGCG CGACGCCATGGTCGG TERM 2990 3980956 - 3980939 - H 82 -11.3 -3.85698 | GCGCCTCTCCACAAA CGCGAGA TAAA TCTCGCG CTACGCCATGGTCGG TERM 2991 3981053 - 3981036 - H 82 -11.3 -3.85698 | GCGCCTCTCCACAAA CGCGAGA TAAA TCTCGCG CTACGCCACGGTCGG TERM 2992 3982009 - 3982035 + G 71 -8.6 -3.85698 | opp_overlap 3981998 TCGATCGCGCAGCGC TCGCCGCCGATC TGG GAATGGCAGCGA TTTCTCCAAACAGCA Rcas_3075 3981384 - 3982751 + | argininosuccinate lyase TERM 2993 3982768 - 3982790 + T 77 -14.8 -2.75535 | opp_overlap 3982753, overlap 3982759 CGTTGCGCACCAGCA GGCGCGCACC ACA GGTGCGCCCC TACTTCAGGTGTTCG TERM 2994 3982926 - 3982948 + T 77 -14.8 -2.75535 | opp_overlap 3982911, overlap 3982917 CGTTGCGCACCAGCA GGCGCGCACC ACA GGTGCGCCCC TACTTCAGGTGTTCG Rcas_3076 3985125 - 3983275 - | multi-sensor signal transduction histidine kinase TERM 2995 3985036 - 3985016 - G 71 -9 -3.727 | opp_overlap 3985016 3985015 3985026 GCGAGGAGACTCAAA GGCAATGC GCCCG GCATCGCC CGTTTTTTCAACGCA TERM 2996 3985026 - 3985038 + g 83 -4.7 -5.0133 | opp_overlap 3985016, overlap 3985016 3985015 TCAAAGGCAATGCGC CCGGC ATC GCCCG TTTTTTCAACGCATA Rcas_3077 3985615 - 3985241 - | response regulator receiver protein TERM 2997 3985522 - 3985501 - G 80 -14.5 -3.14132 | opp_overlap 3985489 3985503 TCTCGGTGCGAGCAA GATGGAGCG CTTC CGCTCCATC GTTCGCAAGCGTTAT Rcas_3078 3985773 - 3986651 + | protein tyrosine phosphatase TERM 2998 3986749 - 3986769 + F 71 -9 -3.81951 | GGCTTCACCACGCTA TGGGTTGG ATGTC CCGACCCA TTTGATGCTATGAGA Rcas_3079 3986948 - 3987628 + | succinate dehydrogenase/fumarate reductase cytochrome b subunit Rcas_3080 3987694 - 3989664 + | succinate dehydrogenase flavoprotein subunit Rcas_3081 3989758 - 3990507 + | succinate dehydrogenase/fumarate reductase iron-sulfur subunit TERM 2999 3990763 - 3990797 + F 80 -14.9 -3.12351 | opp_overlap 3990763 CCGCGCGCGCAGGAA CGGGGAGACCGGCCT GGCAG GGGCAGGTCCCCCCG TTCCCTATGGACCGC TERM 3000 3990797 - 3990763 - f 85 -16.4 -3.14132 | opp_overlap 3990763 CCGCGCGCGCAGGAA CGGGGAGACCGGCC TGGCAGG GGCAGGTCCCCCCG TTCCCTATGGACCGC Rcas_3082 3991574 - 3994024 + | hypothetical protein Rcas_3083 3995307 - 3994000 - | UDP-glucose 6-dehydrogenase Rcas_3084 3996248 - 3995304 - | NAD-dependent epimerase/dehydratase TERM 3001 3996326 - 3996287 - R 90 -14.3 -3.68886 | ACGAACCGATCCAAA CGCCCGG-CACGGCGCGGG CGTC CCCAC-CCGCATCCGGGCG CGCGGGCGTCCTCGC Rcas_3085 3997393 - 3996347 - | signal peptide peptidase SppA, 36K type Rcas_3086 4000791 - 3998794 - | polymorphic outer membrane protein TERM 3002 4000023 - 4000045 + g 71 -9.1 -3.71848 | gap 1, opp_overlap 4000018 4000017, overlap 4000030 CTCGCACAATGCCGC CCGTCGTCGC GTCA GCGGCG-CGG TTGTTCGTGAACCGC Rcas_3087 4001275 - 4002513 + | hypothetical protein Rcas_3088 4003747 - 4002527 - | C-methyltransferase TERM 3003 4003586 - 4003608 + g 71 -11.2 -3.53091 | AATATTGCCTTTCGG CGCGCGTAGT GCG GCTTCGCGCG TTTCCCACAGCACAT Rcas_3089 4004814 - 4003756 - | glycosyl transferase group 1 TERM 3004 4004139 - 4004121 - G 71 -11 -3.44051 | overlap 4004122 GCGGCACGACGACAA CTGCTGCG CCA CGCAGCAA TCGAACATACGCATC Rcas_3090 4007512 - 4004924 - | fibronectin type III domain-containing protein TERM 3005 4007776 - 4007739 - R 81 -4.8 -4.87803 | CACGCGGAAACAAAA GGAAC-CTGCGGCGGCGC TATT GCGC-GCAACGGCGTTCC AGGACTCACGCACAC Rcas_3091 4009002 - 4007782 - | C-methyltransferase TERM 3006 4007950 - 4007938 - G 78 -6.9 -4.57837 | ATAGTCGCGCAAAAA CGCCG GAC CGACG ATCTGTTGACCGGTT TERM 3007 4008880 - 4008860 - G 78 -6.7 -4.60487 | overlap 4008861 4008872 CACGAGCGGCAAAAA CCGAGGCGA ATA TCGCCACGC GGATAATTGACCGCC Rcas_3092 4010422 - 4009190 - | C-methyltransferase Rcas_3093 4011496 - 4010444 - | NAD-dependent epimerase/dehydratase Rcas_3094 4012319 - 4011549 - | glucose-1-phosphate cytidylyltransferase TERM 3008 4011780 - 4011792 + g 74 -6.2 -4.45664 | overlap 4011771 ATTGATCCAGCCTTC GCCG GTTTG CGGC TTTTCGTTGAATTCC Rcas_3095 4013278 - 4012316 - | glycosyl transferase family protein TERM 3009 4013069 - 4013046 - G 70 -12.4 -3.16742 | TTGAAGTTCCATGAA GCGCCGCGAT TGAC ATCGTGGCGC ACATACCGGATGCGC TERM 3010 4013413 - 4013399 - R 91 -8.6 -4.83169 | ATTCGTGTACAAAAA TCGTCA TAC TGACGA AAACAGGGCGCGTTC Rcas_3096 4014046 - 4013402 - | phosphoheptose isomerase Rcas_3097 4015196 - 4014024 - | glycosyl transferase group 1 TERM 3011 4015248 - 4015217 - R 84 -16.6 -2.69151 | gap 1, overlap 4015214 TCCTCCGAGAGATCA GCGGTGCAGGCGCGC GAC GCGCGCCTG-AGCGC GCACCACTGCCAGCG Rcas_3098 4016389 - 4015214 - | glycosyl transferase group 1 Rcas_3099 4017308 - 4016397 - | glycosyl transferase family protein Rcas_3100 4018312 - 4017335 - | glycosyl transferase family protein TERM 3012 4017436 - 4017446 + g 72 -2.4 -4.72007 | CACCAAAGATTGAGC GCAG CAG CCGC TTTGTTTTGCTCACC TERM 3013 4017515 - 4017493 - G 73 -12.7 -3.19513 | ATAATGCCAATCCAA GCGCCGCGT GCCAT ACGCGACGC GCCCGTGACAACCCG Rcas_3101 4019826 - 4018357 - | polysaccharide biosynthesis protein Rcas_3102 4020785 - 4019886 - | hypothetical protein TERM 3014 4020184 - 4020161 - G 75 -11.6 -3.54424 | GTCCACTGTGGCAAA GCACCCGCCC CGCC GGGCGCGCGC GCCGAGGGTCGCCCT Rcas_3103 4022320 - 4020824 - | O-antigen polymerase Rcas_3104 4023110 - 4022421 - | lipopolysaccharide biosynthesis protein Rcas_3105 4024372 - 4023107 - | glycosyl transferase family protein TERM 3015 4024288 - 4024271 - G 79 -11.3 -3.90922 | AGGCGGCGCAAACAA CGGTTGC GGAC GCAACCG CGCCAGTACGGTCAA Rcas_3106 4025517 - 4024369 - | glycosyl transferase group 1 Rcas_3107 4026797 - 4025517 - | glycosyl transferase group 1 TERM 3016 4026146 - 4026119 - G 74 -4.9 -4.63928 | gap 3, overlap 4026120 ACACGATGGTAAAAA CCGCGCCGGAGTCG CGC CG-CTC--GCGCGG GCGAAAGAGGGTCGG TERM 3017 4026284 - 4026262 - G 71 -4.6 -4.4648 | opp_overlap 4026263, overlap 4026249 4026248 ATCGCCACGACAAAA CGGGCGGCGG CGA CCTTCTCCCG CAGCATGGAGCGCTC Rcas_3108 4027528 - 4026839 - | undecaprenyl-phosphate galactose phosphotransferase TERM 3018 4027392 - 4027370 - G 72 -7.6 -4.12254 | overlap 4027367 GATGATCAGAAACAA TGGCAGCACC ATC GGCGACGCCA GGAGTGACAGGGACA TERM 3019 4027473 - 4027491 + g 70 -13.2 -2.88544 | CGTTCAGGACGGTAG CGCTCGAT CCA ATCGAGCG TGTATGCCGGTCGGC Rcas_3109 4028504 - 4027626 - | putative diguanylate cyclase Rcas_3110 4029442 - 4028501 - | hypothetical protein TERM 3020 4028993 - 4028958 - G 82 -6 -4.95155 | gap 1, overlap 4028959 4028960 4028962 TGCAGATCACAAAAA TG-GACCGGCGTATACG CCG CGCGCGCGCCGGCCGCA AACTGATCCACATAC TERM 3021 4029805 - 4029763 - H 100 -19.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCG GCTCGGGGTGACCAT Rcas_3111 4029863 - 4030906 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 3022 4030976 - 4030939 - T 74 -7.5 -4.40311 | overlap 4030941 ACAAAGAAGGTAAAA CCGTAAGGGCGAAGCGC CGCC GCGCCCCGTCCTCCCCG ACAAAAGGGCGCGGC TERM 3023 4030982 - 4031031 + T 100 -22.8 -2.62184 | gap 1, opp_overlap 4030983 4030984 GTCCTCCCCGACAAA AG-GGCGCGGCAACGCCGCGCCC CACCA GCGCGCGGCGCTGCCGCGCCTCA TCCTCTCCGAAAAAC TERM 3024 4031029 - 4030983 - T 100 -29.4 -4.36914 | opp_overlap 4030982, overlap 4030984 TCCTCCCCGACAAAA GGGCGCGGCAACGCCGCGCCCC ACC AGCGCGCGGCGCTGCCGCGCCT CATCCTCTCCGAAAA TERM 3025 4031028 - 4030984 - T 100 -32.9 -3.21934 | opp_overlap 4030982, overlap 4030983 CCTCCCCGACAAAAG GGCGCGGCAACGCCGCGCCCC ACC AGCGCGCGGCGCTGCCGCGCC TCATCCTCTCCGAAA Rcas_3112 4031594 - 4031115 - | blue (type1) copper domain-containing protein Rcas_3113 4032348 - 4031764 - | hypothetical protein TERM 3026 4033165 - 4033187 + G 70 -10.4 -3.60296 | overlap 4033165 TCGGCGCTTTCTGGC CCGCCGCGCC CGA GGCGCTGCCG TTTACACTGGCGCTG TERM 3027 4033192 - 4033246 + G 80 -16.5 -2.64616 | overlap 4033165 AGGCGCTGCCGTTTA CACTGGCGCTGCTTGGGTGCGTG-CAG TTT CTGGCGCGCAATCAGGC-GCGCCAGGG TCATATCAATGCCGA Rcas_3114 4032564 - 4034498 + | multi-sensor signal transduction histidine kinase Rcas_3115 4034743 - 4034531 - | hypothetical protein Rcas_3116 4034874 - 4036418 + | hypothetical protein Rcas_3117 4036422 - 4037507 + | beta-lactamase Rcas_3118 4037607 - 4038197 + | response regulator receiver/ANTAR domain-containing protein TERM 3028 4038361 - 4038399 + F 100 -19.7 -4.07568 | opp_overlap 4038365 4038368, overlap 4038365 TCGAGAGTACCGGAA CTCAGAAGGCGTGGAGC AACAG GCTCCACGCCTTCTTGG TTTTCAGGAGCAAGG TERM 3029 4038395 - 4038365 - f 100 -21.3 -2.54193 | opp_overlap 4038361 4038365, overlap 4038368 GAGTACCGGAACTCA GAAGGCGTGGAGC AACAG GCTCCACGCCTTC TTGGTTTTCAGGAGC TERM 3030 4038365 - 4038395 + F 100 -21.3 -3.66908 | opp_overlap 4038365 4038368, overlap 4038361 GAGTACCGGAACTCA GAAGGCGTGGAGC AACAG GCTCCACGCCTTC TTGGTTTTCAGGAGC TERM 3031 4038392 - 4038368 - f 100 -17.2 -3.42354 | opp_overlap 4038365 4038361, overlap 4038365 TACCGGAACTCAGAA GGCGTGGAGC AACAG GCTCCACGCC TTCTTGGTTTTCAGG Rcas_3119 4038416 - 4038829 + | chorismate mutase TERM 3032 4038819 - 4038838 + F 100 -10.7 -5.46657 | CGGAACAGTGGACTG GCGGAGG ATGATG CCTCCGC TTTTTTATTCGGCTG Rcas_3120 4038966 - 4040117 + | phospho-2-dehydro-3-deoxyheptonate aldolase Rcas_3121 4040313 - 4042691 + | hypothetical protein TERM 3033 4042688 - 4042730 + F 82 -11.2 -3.86944 | opp_overlap 4042695, overlap 4042689 CGGCGAAGACCTTCC ATAAAAAGGTCTCCGAGGCG TTA CGCCTCGGAGACCTTCCCGC TTTAGTACTTGTAAA TERM 3034 4042689 - 4042729 + F 79 -14.7 -2.91684 | opp_overlap 4042695, overlap 4042688 GGCGAAGACCTTCCA TAAAAAGGTCTCCGAGGCG TTA CGCCTCGGAGACCTTCCCG CTTTAGTACTTGTAA TERM 3035 4042723 - 4042695 - f 100 -24.7 -4.83615 | opp_overlap 4042689 4042688 GACCTTCCATAAAAA GGTCTCCGAGGCG TTA CGCCTCGGAGACC TTCCCGCTTTAGTAC Rcas_3122 4042927 - 4044105 + | hypothetical protein Rcas_3123 4045474 - 4044113 - | ASPIC/UnbV domain-containing protein TERM 3036 4044302 - 4044258 - G 73 -8.3 -4.05033 | overlap 4044260 4044261 4044277 TCCATCTGACACAAA TAGCCGCTGCCGGCATCAACG GCG CGCAGTTGCCGCCTGCCGCCA GCGGAGAGCACGACG TERM 3037 4044345 - 4044321 - G 77 -15 -2.84192 | gap 1, overlap 4044277 4044313 GAGAGCACGACGACA GCGCCG-CGCG CCGG CGCGCCGGCGC GGGTCAGCGGCAACA Rcas_3124 4046361 - 4045516 - | alpha/beta hydrolase fold TERM 3038 4045983 - 4045945 - G 70 -7.3 -3.98661 | gap 1, overlap 4045946 CAGATTCACCAGAAA TTGGCCGCGC-AGCGTCA ACGC CGGCGCCAGCGCGACCAG GCGCGCAACCGGCAG Rcas_3125 4046548 - 4049754 + | transcriptional activator domain-containing protein TERM 3039 4049941 - 4049986 + T 73 -9.8 -3.59979 | gap 3, overlap 4049942 4049947 GGCATGGTCACCCCG AGCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGCG TTTACCCTGAGCGAA TERM 3040 4049942 - 4049985 + T 73 -13.3 -2.75844 | gap 3, overlap 4049941 4049947 GCATGGTCACCCCGA GCAGCGCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCC--GCGCTGC GTTTACCCTGAGCGA TERM 3041 4049947 - 4049982 + T 72 -14 -2.65354 | gap 1, overlap 4049942 4049941 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCGCGC TGCGTTTACCCTGAG Rcas_3126 4051830 - 4050052 - | ABC transporter related Rcas_3127 4053581 - 4051827 - | ABC transporter related TERM 3042 4054169 - 4054181 + G 73 -3.4 -4.79683 | opp_overlap 4054169 CATCCTCGGCATACA CATC AGTGA GATG TTTGTTTTGTCGGTT Rcas_3128 4054029 - 4054835 + | hypothetical protein TERM 3043 4055316 - 4055287 - g 79 -13.7 -3.52102 | gap 1, opp_overlap 4055284 4055307 ATCGGACCTACACAA CGCGATCTGA-CGA TAT TCGACCAGATCGCG CCGTTTGTGGGACTC Rcas_3129 4054933 - 4056126 + | histidine kinase Rcas_3130 4056667 - 4056134 - | phage shock protein C, PspC TERM 3044 4056586 - 4056563 - G 70 -7.4 -4.02424 | AGTAACCAGGACAAA GATCAGGCGA ACAA TCACCGGATC GATCTGAAAATAGTC Rcas_3131 4057867 - 4056764 - | cell cycle protein Rcas_3132 4059576 - 4057936 - | polymorphic membrane protein Chlamydia TERM 3045 4059300 - 4059310 + g 73 -8.2 -3.9644 | CACGGATGTCAAGGT CGCC ATC GGCG TTGTTATCTTCCAGC TERM 3046 4060055 - 4060080 + H 95 -13.3 -4.13995 | opp_overlap 4060053 4060055 TGCTCCACCAAAAGA GACGGCAGGTG TCAT CGCCTGTCGTC TTTACTTTATAGCAA TERM 3047 4060080 - 4060055 - H 71 -8.9 -3.73042 | opp_overlap 4060055, overlap 4060053 TGCTCCACCAAAAGA GACGGCAGGTG TCAT CGCCTGTCGTC TTTACTTTATAGCAA Rcas_3133 4060134 - 4061123 + | alcohol dehydrogenase Rcas_3134 4061871 - 4061269 - | response regulator receiver protein TERM 3048 4061443 - 4061467 + g 72 -4.1 -4.65747 | overlap 4061446 4061447 GGTCTTGATCGTGGC GAGCGCCGCTT CCA GAGCGGCATGC TTTTGTTCGAGATTG Rcas_3135 4065431 - 4061868 - | PAS/PAC sensor hybrid histidine kinase TERM 3049 4064626 - 4064616 - G 76 -6.8 -4.42653 | ACCCGACTCATAAAA TGGC TTG GCCA CGACCGTTATCGGCA Rcas_3136 4068187 - 4065428 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3050 4068369 - 4068346 - H 78 -13.9 -3.14963 | overlap 4068338 CGCATAACGACTGAA GTGACGCGC GCTGGA GCGCGTCAC CCGCCTGCACGGACA Rcas_3137 4068588 - 4068971 + | large conductance mechanosensitive channel protein Rcas_3138 4069069 - 4069779 + | glycosyl transferase family protein Rcas_3139 4069776 - 4070480 + | SNARE associated Golgi protein TERM 3051 4071569 - 4071587 + G 76 -8.8 -4.24342 | TCGGTTTGCCGGGAT GCCAGTGA CGT TCACCGGC TTTCTTAATGGGCAC TERM 3052 4071777 - 4071757 - g 76 -6.8 -4.39696 | opp_overlap 4071767 TGCGAAATGAAGAAA CCGGCG TCTTCTTTG CGCCGG GATCGGCATACAGTT Rcas_3140 4070829 - 4071974 + | glycosyl transferase group 1 Rcas_3141 4071971 - 4072693 + | phosphotransferase domain-containing protein Rcas_3142 4072871 - 4074361 + | tRNA/rRNA methyltransferase (SpoU) Rcas_3143 4075254 - 4074325 - | alpha/beta hydrolase fold Rcas_3144 4076619 - 4075255 - | small GTP-binding protein Rcas_3145 4077241 - 4076762 - | hydrogenase expression/formation protein Rcas_3146 4078123 - 4077347 - | Ni/Fe-hydrogenase, b-type cytochrome subunit Rcas_3147 4079844 - 4078132 - | nickel-dependent hydrogenase large subunit Rcas_3148 4081128 - 4079875 - | hydrogenase (NiFe) small subunit HydA Rcas_3149 4082968 - 4081277 - | ABC transporter related TERM 3053 4083287 - 4083273 - R 70 -4.2 -4.45945 | overlap 4083286 AGCGATCAACTAAAA CCTGGA CAA TCAAGG ACGTGGAGCGACCGA TERM 3054 4083343 - 4083289 - R 85 -17.1 -2.87274 | overlap 4083286 4083328 CTGGACAATCAAGGA CGTGGAGCGACCGACGTTGGCTTCG ACAGG CTCAGCCAACGTCAGCCGCACGACG ACCAAGACAAGCAAG Rcas_3150 4086297 - 4083451 - | hypothetical protein TERM 3055 4084978 - 4084942 - G 74 -13.7 -2.93858 | gap 2, opp_overlap 4084957 CAGCAGATCGAGATA GGCGCGCTGCCAGAGCG GGGGA CGCGC-GGC-GCGCGCC GCCTGTTGCTGCTCG TERM 3056 4086121 - 4086073 - G 90 -18.2 -2.88579 | gap 1, opp_overlap 4086069 CCAAGCGCCGATATA GC-GCAGGAGCAGCGCAAATGGC GACC GCCCCTGACGCTGCTCCTGCTGC CGGATTTCGTCCTGC Rcas_3151 4087902 - 4086301 - | secretion protein HlyD family protein TERM 3057 4086843 - 4086867 + g 76 -5.5 -4.56597 | opp_overlap 4086842, overlap 4086840 4086857 GCGGCGCTATGACAC GCCCGTCATCG ACG CGGCGGCGTGC TTTTTCCAGGGCGCG Rcas_3152 4090971 - 4088059 - | extracellular solute-binding protein TERM 3058 4088576 - 4088536 - G 95 -10.4 -4.57073 | gap 1 CAGGCCCCGCAAAAA CACT-TCGCTCGACGGCAC ACCG GCGCCGCCGACCGGCAGTG GCGCAGCTCGAATGT TERM 3059 4089270 - 4089257 - G 84 -2.3 -5.37345 | CCGAACCAGAAAAAA CAGTC GCTG GTCTG CGCCAGGGTGGCAGC Rcas_3153 4091527 - 4094799 + | peptidase S41 Rcas_3154 4094845 - 4095897 + | aldose 1-epimerase Rcas_3155 4096442 - 4096639 + | hypothetical protein Rcas_3156 4096646 - 4097638 + | hypothetical protein TERM 3060 4098419 - 4098408 - g 71 -5.8 -4.25104 | CGCCGGGCAGGAAAA TGCC GAGG GGCA GGCGCGCACAATGCT TERM 3061 4098839 - 4098829 - g 73 -8.2 -3.97139 | overlap 4098830 GAACGCCAACAAGAA GCGC GCC GCGC TCAAATGGCGCGTGA Rcas_3157 4097716 - 4098864 + | peptidase M50 TERM 3062 4099011 - 4098979 - T 100 -27.9 -3.02144 | opp_overlap 4098999 TCATTCCCGTGAACA TGCGTCGCCGCCATC GGT GATGGCGGCGACGCA CGAGTTCGAGCGCCG Rcas_3158 4100293 - 4098956 - | anti-sigma-factor antagonist TERM 3063 4100093 - 4100075 - G 75 -11.6 -3.54307 | overlap 4100076 AAGATGCTGGGCAAA CGCGCGCG TCT CGCGCGCC GGTCCCAGGATCAGC TERM 3064 4100092 - 4100076 - G 78 -15.1 -2.72263 | overlap 4100075 AGATGCTGGGCAAAC GCGCGCG TCT CGCGCGC CGGTCCCAGGATCAG Rcas_3159 4100925 - 4100353 - | hypothetical protein Rcas_3160 4101944 - 4101057 - | two component transcriptional regulator TERM 3065 4101305 - 4101321 + g 81 -12.3 -3.88291 | CATACTCGGTCGGCG TCGCCTG AAC CAGGCGA TTTCTGAAGATAATG Rcas_3161 4103983 - 4101938 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 3066 4102117 - 4102099 - G 73 -3 -4.77759 | opp_overlap 4102088, overlap 4102088 4102085 4102100 AGAACGGATCAAAAA TCCGTTCT TGC AGATCGGG CATAATACCTGGTCC TERM 3067 4103696 - 4103724 + g 71 -11 -3.51232 | gap 1, opp_overlap 4103695 4103694, overlap 4103707 ACCATACCACCAACC CTCCCGCGCTACG CTGT CG-AGCGCGCGAG TTACTTTGCGCCGCC TERM 3068 4103992 - 4104029 + r 70 -10.5 -3.53012 | opp_overlap 4103993, overlap 4103993 ACACCATGTGAAGCG AGCGTGCGCAATGGAGA TTCG TGTCCTTTGCGCGCGCG TTTCCGGGAACGCGG TERM 3069 4103993 - 4104028 + r 73 -14 -2.71712 | opp_overlap 4103993, overlap 4103992 CACCATGTGAAGCGA GCGTGCGCAATGGAGA TTCG TGTCCTTTGCGCGCGC GTTTCCGGGAACGCG Rcas_3162 4105046 - 4104282 - | short-chain dehydrogenase/reductase SDR TERM 3070 4106326 - 4106352 + G 72 -13.6 -2.79098 | overlap 4106324 GCATCATCCCCGGTT GGGGCGGCACGC AGC GCCTGCCGCGCC TGATTGGTCCATCGG Rcas_3163 4105896 - 4106681 + | enoyl-CoA hydratase/isomerase TERM 3071 4107193 - 4107203 + G 74 -2.4 -4.84359 | overlap 4107190 TTCTCTTTCAGTCCT GCTC CAG GTGC TTTTTCTACCGATCC Rcas_3164 4106948 - 4108309 + | major facilitator superfamily permease Rcas_3165 4108519 - 4109856 + | acyl-CoA dehydrogenase domain-containing protein Rcas_3166 4109978 - 4110754 + | electron transfer flavoprotein alpha/beta-subunit Rcas_3167 4110768 - 4111754 + | electron transfer flavoprotein alpha subunit Rcas_3168 4112260 - 4112694 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_3169 4112691 - 4113269 + | protein serine/threonine phosphatase TERM 3072 4115985 - 4116003 + G 72 -3.8 -4.5442 | opp_overlap 4115986, overlap 4115986 TCGAAAGCTGCATCA ATGAAGGC AGT GTCTTCAG TTTTGTGATTCCGGC Rcas_3170 4113290 - 4116025 + | multi-sensor signal transduction histidine kinase Rcas_3171 4116578 - 4117726 + | extracellular solute-binding protein Rcas_3172 4117856 - 4119478 + | binding-protein-dependent transport systems inner membrane component Rcas_3173 4120277 - 4119495 - | hypothetical protein TERM 3073 4120176 - 4120208 + g 71 -14.1 -2.58544 | overlap 4120175 TGGACGCAGCGCCGG CGCCAGATCGTCGGC GAT GCTGACGATCAGACG GTTGTGCACATCGGG TERM 3074 4120488 - 4120472 - R 71 -8 -4.05747 | overlap 4120477 TACAGGCTATAGAAA GCGAAG CCTGC CTTCGC GGGCTAAACCGTGCG Rcas_3174 4121070 - 4120519 - | hypothetical protein Rcas_3175 4121214 - 4122470 + | phosphoribosylamine--glycine ligase Rcas_3176 4122467 - 4123114 + | phosphoribosylglycinamide formyltransferase Rcas_3177 4126345 - 4123430 - | adenylate/guanylate cyclase with GAF and PAS/PAC sensors TERM 3075 4126065 - 4126038 - G 100 -12 -4.46212 | gap 1, opp_overlap 4126038 4126040, overlap 4126040 GGTTTCACCAGAAAA TCGTCGGCGCCCG CAT CGAGCGCCG-CAA CTTTCGCCTCCGGGT TERM 3076 4126598 - 4126556 - R 88 -13.5 -3.59979 | overlap 4126588 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGAGCG GGT CGCGCAAGACCCCTCGC-GCG GCTCGGGGTGACCAT Rcas_3178 4127445 - 4127041 - | methylglyoxal synthase Rcas_3179 4127782 - 4128630 + | hypothetical protein Rcas_3180 4128955 - 4130049 + | peptidase M20 TERM 3077 4130154 - 4130119 - T 72 -14 -2.65354 | gap 1, opp_overlap 4130137, overlap 4130116 4130115 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GTCCTGCGCGATGTT TERM 3078 4130137 - 4130165 + T 72 -13.1 -3.01712 | opp_overlap 4130119 4130116 4130115 CGGAATCTGCGCGGG TCGCGCACGACCC CTC GCGTCCTGCGCGA TGTTGCGACGGCAGC TERM 3079 4130298 - 4130253 - T 73 -9.8 -3.59979 | gap 3, overlap 4130254 4130257 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGGGAATATGCC TERM 3080 4130297 - 4130254 - T 73 -13.3 -2.75844 | gap 3, overlap 4130253 4130257 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGGGAATATGC TERM 3081 4130292 - 4130257 - T 72 -14 -2.65354 | gap 1, overlap 4130254 4130253 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGGGAA Rcas_3181 4131640 - 4130456 - | hypothetical protein TERM 3082 4131252 - 4131230 - G 79 -11.2 -3.85698 | GTCGCGCCGCACAAA CGCCGGCACA CCA CGCGCCGACG CTTCCGCCATAAGTT TERM 3083 4131288 - 4131302 + g 100 -8.5 -5.42259 | ACCTGCAACGGCAGT GCGGC TGCCC GCCGC TTTTTTTGCAGGTCC TERM 3084 4131805 - 4131777 - R 100 -16.8 -4.61566 | opp_overlap 4131783 GGGGAAAGCAGAAAA CAACCACCCCCG GTAGT CGGAGGTGGTTG AGCGTTGAATGCCGG Rcas_3182 4136076 - 4131826 - | hypothetical protein TERM 3085 4137535 - 4137521 - g 71 -8.6 -3.85909 | opp_overlap 4137531, overlap 4137531 GCACTCAAACGCAAA CTGGAT CAG ATCCAG CGCCTGGGATTTGTC Rcas_3183 4136573 - 4138189 + | hypothetical protein Rcas_3184 4140223 - 4138418 - | peptidase M61 domain-containing protein Rcas_3185 4142200 - 4140284 - | hypothetical protein TERM 3086 4142612 - 4142586 - H 82 -14.5 -3.17763 | gap 1, opp_overlap 4142586 CCCATATGCGATGAA CGCCCCC-TCCT GCAA AGGATGGGGGCG TTTCTATTTCGGCGA TERM 3087 4142586 - 4142612 + H 100 -14.5 -4.32857 | gap 1, opp_overlap 4142586 CCCATATGCGATGAA CGCCCCC-TCCT GCAA AGGATGGGGGCG TTTCTATTTCGGCGA Rcas_3186 4142639 - 4143679 + | threonine synthase TERM 3088 4144269 - 4144282 + G 79 -8.1 -4.37886 | overlap 4144258 GAACGCGGCATCGTG CCGGT GATT ACCGG TTTTATCGGCGCTAC TERM 3089 4144777 - 4144797 + G 72 -11.9 -3.32844 | overlap 4144759 4144757 4144781 TCTCTCAGGCGTCGT CGGAGCAGA GCA TCTGCTTCG TTGTGCCATCCAACA Rcas_3187 4143699 - 4145102 + | aspartate kinase Rcas_3188 4145378 - 4146436 + | aspartate-semialdehyde dehydrogenase Rcas_3189 4146762 - 4147655 + | MCP methyltransferase, CheR-type Rcas_3190 4149623 - 4147824 - | integral membrane protein MviN TERM 3090 4148976 - 4148964 - G 73 -6.9 -4.35483 | CTGGACCAGAACAAA CAGCG CCG CGCCG ATATTGACGCCCCAG TERM 3091 4149853 - 4149871 + H 71 -8.1 -4.00124 | gap 1, opp_overlap 4149840 4149838 4149853 GACGCTCCAGAACAA GCGG-CGC GTCT GCGGCCGC TTTCATTATGAGATG TERM 3092 4149964 - 4149945 - H 80 -10 -4.0896 | AAAGTCTGCTGAAAA GCGCATTC GCTC GAACGCGC GCCGCGCGCTGCGCA TERM 3093 4150139 - 4150122 - g 75 -3.3 -4.88736 | overlap 4150125 GATCATCCACAAAAA CAACGCC GCCC GGCGTAA GTCGCGTCTGGCAAA TERM 3094 4150136 - 4150125 - g 83 -7.2 -4.5448 | overlap 4150122 CATCCACAAAAACAA CGCC GCCC GGCG TAAGTCGCGTCTGGC Rcas_3191 4149985 - 4150191 + | ribosomal protein S20 Rcas_3192 4151262 - 4150198 - | DNA polymerase III, delta subunit TERM 3095 4150503 - 4150468 - G 74 -13.2 -3.28453 | overlap 4150466 4150464 4150496 CATGAACAGAATATA CTGTGCCGCCTGACCG TCGT CGAGCAGACGGCGCAG CGCTGTCAGCGCCGC TERM 3096 4151163 - 4151153 - G 76 -6.8 -4.50583 | AACAGCACGACAAAA CCTG AGA CAGG AAGAAACCCCACCGC Rcas_3193 4152384 - 4151383 - | aldo/keto reductase TERM 3097 4152717 - 4152733 + H 76 -12.3 -3.41602 | CGCAGCGCCTCTTCC CGCCATG GCG CATGGCG TTATGGTACAATACC Rcas_3194 4152862 - 4154586 + | hypothetical protein Rcas_3195 4156084 - 4154693 - | TPR repeat-containing CheR-type MCP methyltransferase Rcas_3196 4157121 - 4156081 - | response regulator receiver modulated CheB methylesterase Rcas_3197 4157594 - 4157118 - | CheW protein Rcas_3198 4157958 - 4157587 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_3199 4158351 - 4157971 - | response regulator receiver protein TERM 3098 4158159 - 4158132 - G 91 -16.4 -3.63627 | gap 1, opp_overlap 4158152, overlap 4158117 TCGGCACATTGGAAA TGTCCGGCGCCTG TTT CAGGCGCC-GACA CAGGGTGTAGCCGTC Rcas_3200 4160708 - 4158363 - | CheA signal transduction histidine kinase Rcas_3201 4162552 - 4160726 - | methyl-accepting chemotaxis sensory transducer Rcas_3202 4163191 - 4162643 - | CheW protein TERM 3099 4162894 - 4162872 - G 71 -5.5 -4.25016 | gap 1 ATGATCAAGAAAGAA CCGGGTG-TC GGAG GAGCGCCCGG CAGATCGAGCAGCGG TERM 3100 4162979 - 4162967 - G 78 -10.5 -3.98661 | overlap 4162956 CAGACCGACGATAAA CGGCG GCA CGCCG AAGAGGGGTGTGTAC Rcas_3203 4164698 - 4163559 - | succinyl-CoA synthetase, beta subunit Rcas_3204 4165151 - 4164759 - | hypothetical protein Rcas_3205 4165246 - 4165536 + | phage shock protein C, PspC Rcas_3206 4166959 - 4165778 - | acetyl-CoA acetyltransferase TERM 3101 4166375 - 4166348 - G 76 -11.2 -3.75153 | opp_overlap 4166332, overlap 4166369 GCCCGGCAATGGAAA CGGGGCGATTTC ATCG GCAAACGCCCCG GCATCCTGTGCGGCG Rcas_3207 4170445 - 4166972 - | WD-40 repeat-containing protein TERM 3102 4168197 - 4168207 + g 71 -8.2 -3.86897 | opp_overlap 4168197 TCAGCGATCGGAACA GGCG CTT CGCC TTTCTGAAGCGTCAC TERM 3103 4168395 - 4168422 + g 70 -9.8 -3.53811 | gap 1 GTTGCCGCGAGCGCC GCCTGAGTGCCGC GCA GCAGCGC-CAGGC TTTCGGCAGCCTGCG Rcas_3208 4172511 - 4170442 - | hypothetical protein TERM 3104 4170486 - 4170470 - G 74 -10.1 -3.75378 | opp_overlap 4170469 ACCTTGAGAACAGAA GTCAGCG GCT CGCCGAC CTTGCGTAATTCATC TERM 3105 4170599 - 4170574 - G 86 -8.9 -4.61527 | overlap 4170563 AAAACGGCGGAAAAA CTGCCGCGCCT TCGT AGGATCGGCAG CACCCAGCGCTTCGG TERM 3106 4174862 - 4174840 - g 76 -9.2 -4.09805 | opp_overlap 4174840, overlap 4174841 GCAGCAAGAAGCAAA CGTTCAACGT TCA ACGTTCAACG CTCAACGTTCAACAT Rcas_3209 4172585 - 4176016 + | hypothetical protein TERM 3107 4177343 - 4177383 + G 82 -10.9 -4.02051 | GGAACGGGGCGCGCG CGACGCCGCGCCTGGCGCT TCA GGCGGCAATCGTGGCGACG TTCTTTGGGTTGCTG TERM 3108 4177527 - 4177541 + G 76 -7 -4.42386 | ATTCCGCGCCGCACT CGCCGC ACA GCCGCG TTTTGTCGATGCGCA Rcas_3210 4176061 - 4178190 + | hypothetical protein Rcas_3211 4179070 - 4179684 + | phosphoserine phosphatase Rcas_3212 4179849 - 4180784 + | glycosyl transferase family protein TERM 3109 4181048 - 4181067 + G 71 -5.6 -4.3739 | opp_overlap 4181051, overlap 4181049 TACGCTGGCGGCATT ACACCCGG TCAG TCGGGTGA TTTTATCAAAGCCTG Rcas_3213 4180781 - 4181776 + | hypothetical protein Rcas_3214 4182162 - 4182581 + | hypothetical protein Rcas_3215 4182606 - 4183595 + | oxidoreductase domain-containing protein Rcas_3216 4183607 - 4184569 + | aldo/keto reductase Rcas_3217 4184874 - 4185839 + | GDP-mannose 4,6-dehydratase Rcas_3218 4186472 - 4185828 - | hypothetical protein Rcas_3219 4187837 - 4186509 - | aminotransferase class-III TERM 3110 4186783 - 4186806 + g 70 -8 -4.09685 | overlap 4186784 AACAATTCCGCCTTG AGCAGCGCTC CCTG GCGCGCTGCG TTTTCGACCATGCGC Rcas_3220 4191389 - 4187853 - | TPR repeat-containing protein TERM 3111 4188076 - 4188064 - G 70 -7.7 -4.07687 | ACCGCCGCCTGAAAA TTGCG CTG CGCAA AATAGACCCGTCCCA TERM 3112 4189839 - 4189874 + g 75 -11.8 -3.63515 | CAGATCGGCGCGGCG CGCCTGATGGGTGGCG ATGC TGCCATCGATCCGGCG TTGTTCGGAGTCGGC Rcas_3221 4192725 - 4191394 - | response regulator receiver modulated diguanylate cyclase Rcas_3222 4193760 - 4192816 - | ribokinase-like domain-containing protein Rcas_3223 4194916 - 4193744 - | band 7 protein TERM 3113 4194144 - 4194156 + g 77 -2.6 -4.96848 | overlap 4194132 TGTCGTTTCTGATAA GCGT CGGTT GCGC TTTTTGTCTCAGCGA Rcas_3224 4195870 - 4194917 - | alcohol dehydrogenase TERM 3114 4195042 - 4194989 - G 73 -11 -3.60098 | gap 2, overlap 4194975 4195005 ATCGTGGAGCGGAAA CCGCGCAGCGATCAATGGCGCCGTTG CGAT CAACC-CGCCGTCGAGCGC-GCGCAG CGCCGCTGCAAACGG Rcas_3225 4196213 - 4197154 + | methionyl-tRNA formyltransferase TERM 3115 4197156 - 4197168 + T 71 -7.7 -4.128 | GGTTGGGTGGTTAGG GGTTC TGG GAACC TTTCTGTCTGACGCT Rcas_3226 4197784 - 4197455 - | DNA polymerase beta subunit Rcas_3227 4198154 - 4197771 - | HEPN domain-containing protein Rcas_3228 4198785 - 4198165 - | hypothetical protein Rcas_3229 4199321 - 4198812 - | molybdenum cofactor synthesis domain-containing protein Rcas_3230 4200261 - 4199728 - | small GTP-binding protein Rcas_3231 4201030 - 4200275 - | hypothetical protein TERM 3116 4200991 - 4200977 - G 70 -10 -3.59979 | overlap 4200988 4200989 TGGTCCCATCCGAAA GACCTG AAA CAGGTC GCTCAACGACATATC Rcas_3232 4201604 - 4201053 - | hypothetical protein TERM 3117 4201200 - 4201225 + g 73 -11.1 -3.57144 | overlap 4201201 CGTAGCAGCCGCATC GGGTTGCGCGT GCGC GCGCGCAACCG TTTCGGCGTGCGCCA TERM 3118 4201201 - 4201224 + g 75 -14.6 -2.74144 | overlap 4201200 GTAGCAGCCGCATCG GGTTGCGCGT GCGC GCGCGCAACC GTTTCGGCGTGCGCC TERM 3119 4201461 - 4201487 + g 73 -8.6 -3.9712 | CTCATAGAAATCCTC GCGCATCGCCGG CGC CTGTTGGTGCGC TTTGTCCTGCAATGA Rcas_3233 4202158 - 4201787 - | roadblock/LC7 family protein TERM 3120 4202345 - 4202311 - RH 100 -18.6 -3.51365 | opp_overlap 4202304, overlap 4202312 GGAGACTCCACACAA CCGGGCAGGCGAAGGC GAT GCCTTTGCCTGCCCAA CGAGATGTTCGTAGC TERM 3121 4202344 - 4202312 - RH 95 -19.9 -2.70498 | opp_overlap 4202304, overlap 4202311 GAGACTCCACACAAC CGGGCAGGCGAAGGC GAT GCCTTTGCCTGCCCA ACGAGATGTTCGTAG TERM 3122 4203425 - 4203450 + Gr 91 -8.2 -4.8543 | CTGGGCGATGCTTAT CCGCGCGCTA TCGTGC TGGGGCGCGG TTTTTATGAGGATTC Rcas_3235 4204886 - 4204026 - | abortive infection protein Rcas_3234 4202549 - 4204078 + | hypothetical protein TERM 3123 4206474 - 4206457 - g 71 -9.1 -3.70068 | GAGCATAAGGGCAAA TGGCGCG GGCG CACGCCA GGCAACAAACTGGTC Rcas_3236 4205224 - 4206666 + | RNA modification protein Rcas_3237 4206663 - 4207502 + | abortive infection protein TERM 3124 4207827 - 4207854 + G 71 -8.4 -3.86015 | gap 1, opp_overlap 4207825 4207826 CGTTTCGCTGAAAGC CGGGCGTCAGCTC GTC GACCTG-CGCCTG TTTGTCACCGAAGTC TERM 3125 4207910 - 4207877 - g 91 -9.6 -4.62471 | gap 1, opp_overlap 4207879 4207880, overlap 4207879 CCGAAGTCGGAAAAA CGGCGCTG-ACATCG CTGAT CGACGTTCAGCGCGG GCCGGCGCTGGCAGC Rcas_3238 4207510 - 4208370 + | TPR repeat-containing protein TERM 3126 4208441 - 4208464 + F 78 -7.4 -4.68124 | opp_overlap 4208441 TCCTCTATACTGAAA CCGGACGT GCTTCATG GCGTCCGG TTTTCTGTGTGTTGC Rcas_3239 4208527 - 4209219 + | hypothetical protein Rcas_3240 4209216 - 4210595 + | ATPase central domain-containing protein Rcas_3241 4210611 - 4212047 + | type II secretion system protein E Rcas_3242 4213817 - 4213110 - | phosphoribosyltransferase TERM 3127 4213972 - 4213935 - R 100 -21.5 -3.34902 | gap 1, overlap 4213938 TTCGACGATACAATA CAATGGCGGACAGGGCAC AGA GCGCC-TGTCCGCCATTG CGATGGAGTGCGTCA TERM 3128 4213969 - 4213938 - R 100 -17.4 -3.80945 | gap 1, overlap 4213935 GACGATACAATACAA TGGCGGACAGGGCAC AGA GCGCC-TGTCCGCCA TTGCGATGGAGTGCG Rcas_3243 4215156 - 4214230 - | beta-lactamase domain-containing protein TERM 3129 4214926 - 4214900 - G 76 -8.7 -4.13014 | overlap 4214902 TTCAGATGCGGAAAA TAGCGCACCAG CGATC CTGTTGCGCCA GCGTGATCCAGGTGA TERM 3130 4215393 - 4215340 - H 82 -14.5 -3.17392 | gap 1 CAGCGCGGAATCTAA CCGAGCACAGCGCGGAATC-GGAGCA GGT CGCGCCAGACCCCTCGCTCCGCTCGG GGTGACCATGCCGGA TERM 3131 4215770 - 4215717 - H 82 -14.6 -3.17392 | gap 3, overlap 4215704 4215700 CAGCGCGGAATCTAA CCGAGC-GCAGCGCGGAATC-GGAGCG GGT CGCGCCAGACCCCTCGC-GCTGCTCGG GGTGACCATGCCGGA TERM 3132 4216940 - 4216958 + G 70 -10.2 -3.55071 | overlap 4216941 GACGCACGCCTCTGG TCGCCGGA CGA TCCGGCGC TTTACCGGGCTGTGC TERM 3133 4216941 - 4216957 + G 72 -13.7 -2.72829 | overlap 4216940 ACGCACGCCTCTGGT CGCCGGA CGA TCCGGCG CTTTACCGGGCTGTG Rcas_3244 4216223 - 4218973 + | glycoside hydrolase family protein TERM 3134 4221836 - 4221791 - f 72 -13.1 -3.01712 | overlap 4221773 4221771 CCTTCTCCGCCAACA GCGCCGACTTCGGCGGCGTCG GCGG CGGCATCGCCAACGCCGGCAC GCTGACGGTGACCAA TERM 3135 4221917 - 4221872 - f 72 -13.1 -3.01712 | overlap 4221854 4221852 CCTTCTCCGCCAACA GCGCCGACTTCGGCGGCGTCG GCGG CGGCATCGCCAACGCCGGCAC GCTGACGGTGACCAA Rcas_3246 4222340 - 4222828 + | hypothetical protein Rcas_3247 4222936 - 4223664 + | hypothetical protein TERM 3136 4223716 - 4223669 - f 77 -8.5 -4.38927 | opp_overlap 4223679, overlap 4223670 TTCTGAGATAACAAA TGCTCA-ACGAGCCCGGGGTTCC TTGA GGAAGC-CGGGCTCGTATGGCCA TTCCGAACCAGGTGG Rcas_3249 4224101 - 4224421 + | hypothetical protein Rcas_3250 4224438 - 4225493 + | hypothetical protein TERM 3137 4226649 - 4226672 + F 73 -8.8 -3.95555 | GGTAGCCTGAAGATC GGGGCCGTTG CTCA CAACTGCTCC TTTCTAAATCGTTGT Rcas_3251 4227305 - 4227763 + | ATP-cone domain-containing protein TERM 3138 4228314 - 4228285 - g 75 -14.9 -2.82519 | opp_overlap 4228313, overlap 4228282 CGACGAGATCAAGCA GCGCGGCGGCGCT CTCG AGCGCCCCAGCGC TATCCGCGAGCCGGA Rcas_3252 4227779 - 4228672 + | restriction endonuclease Rcas_3253 4228692 - 4229444 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 3139 4229481 - 4229469 - f 70 -4.1 -4.66833 | overlap 4229479 4229480 GCTGAACGTGAAAAA CAGTA GAA TACCG CGTCGAAGCGCGAGC Rcas_3254 4229517 - 4229867 + | hypothetical protein Rcas_3255 4229860 - 4230288 + | NusB antitermination factor Rcas_3256 4230340 - 4230588 + | acyl carrier protein TERM 3140 4230591 - 4230573 - f 78 -7.4 -4.70169 | CTATATCGAACAAAA GTTACAGG CGG CCTGAAAC ATGATGGTTGTGCGT TERM 3141 4231287 - 4231307 + G 73 -12.5 -3.17763 | TCGATCCGGGTCCAA TCGGCGCGC GCC GCGCGCGGA TTGCTGAGGTCTCAG TERM 3142 4231574 - 4231556 - g 81 -3.8 -5.06816 | ATGGCGGAAGAAAAA CGACGC CGGGATC ACGTCG ATGCCATAGCCAATG Rcas_3257 4230719 - 4231717 + | sec-independent translocation protein mttA/Hcf106 Rcas_3258 4231730 - 4232665 + | Sec-independent protein translocase, TatC subunit TERM 3143 4233087 - 4233099 + G 75 -3.4 -4.83169 | CTCGTGAACGTCTGC CGAT TGTGC ATCG TTTTTATGCCGAAAT Rcas_3259 4232705 - 4233598 + | ribosomal RNA methyltransferase TERM 3144 4233629 - 4233613 - f 73 -4.4 -4.62336 | ACGTCACTGCAAAAA GCAACC ACGAA GGTTAC AAAGGAAATGCTCTT TERM 3145 4234752 - 4234733 - g 77 -4.2 -4.84527 | GGCACACATCAAAAA CCGCGATA CACT CATCTCGG CGGTCACAGCAACCA Rcas_3260 4234317 - 4235201 + | peptidase M48 Ste24p TERM 3146 4235229 - 4235253 + F 100 -10 -5.0538 | gap 1, overlap 4235230 ACCTCTTCGAGCAGC G-CAGGCGGCC CGTC GGTCGCCTGTC TTTTTTGCGCTAGAA TERM 3147 4235230 - 4235251 + F 100 -13.7 -4.15748 | overlap 4235229 CCTCTTCGAGCAGCG CAGGCGGCC CGTC GGTCGCCTG TCTTTTTTGCGCTAG TERM 3148 4235410 - 4235440 + G 71 -12.6 -3.07043 | CGTTCGCCGTCGGGC GCGTGATCGAATCG TTG TGGTTCGATCCCGC TGTTCCGATCATGCG Rcas_3261 4235292 - 4236683 + | multi-sensor signal transduction histidine kinase Rcas_3262 4236790 - 4237458 + | two component LuxR family transcriptional regulator Rcas_3263 4238447 - 4237479 - | hypothetical protein TERM 3149 4238248 - 4238228 - G 70 -12.5 -2.84801 | opp_overlap 4238227 4238246 CAGCGCCAAAGAGGA GGGCGACGA GTA TCGGCGCCC ATAGTTGAGCAATGG TERM 3150 4238812 - 4238858 + G 75 -14.5 -2.81173 | gap 2 GCCGGAGATGCGCAT GCGCTGC-CGCTG-CGCACCGCA TCC TGTGGCGCGGCAGTGTGCAGTGC TGTGCTGGGATTGCT Rcas_3264 4238566 - 4239279 + | methyltransferase type 11 Rcas_3265 4239746 - 4239489 - | hypothetical protein Rcas_3266 4239986 - 4241143 + | tRNA-guanine transglycosylase, various specificities Rcas_3267 4241758 - 4241525 - | hypothetical protein Rcas_3268 4242288 - 4243862 + | alkaline phosphatase Rcas_3269 4244857 - 4244033 - | molybdopterin binding domain-containing protein Rcas_3270 4245068 - 4245481 + | hypothetical protein Rcas_3272 4248131 - 4246755 - | hydroxypyruvate reductase TERM 3151 4247893 - 4247921 + g 71 -10.9 -3.53012 | opp_overlap 4247890 4247891 TCGCCGAGAATACTG GCGGCAGCGGCAG CCA TTGGCGCTCCCGC TTTGCCGGCGCCAAC Rcas_3273 4249939 - 4248128 - | pepF/M3 family oligoendopeptidase TERM 3152 4250163 - 4250121 - R 88 -13.5 -3.59979 | overlap 4250122 4250125 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 3153 4250162 - 4250122 - R 84 -17 -2.75844 | overlap 4250121 4250125 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 3154 4250160 - 4250125 - R 85 -18.4 -2.65354 | gap 1, overlap 4250122 4250121 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC TERM 3155 4250275 - 4250245 - R 77 -12 -3.60792 | gap 1 TCCGCAAGCGCCAAA GCGCAC-ATCCTG CCATCT CAGGATAGTGCGC GTACAGGCACAATGC Rcas_3274 4251586 - 4250336 - | TPR repeat-containing protein TERM 3156 4250982 - 4250970 - G 76 -9.1 -4.08706 | TGTTCAGCATAGAAA CGCTC TCT GAGCG AATGGACCACGCCAA Rcas_3275 4253009 - 4251750 - | von Willebrand factor type A Rcas_3276 4253607 - 4255034 + | serine/threonine kinase protein Rcas_3277 4255038 - 4255838 + | phosphoribosylformylglycinamidine synthase I Rcas_3278 4258167 - 4257337 - | extracellular solute-binding protein Rcas_3279 4258350 - 4259012 + | hypothetical protein TERM 3157 4260126 - 4260115 - g 76 -5.8 -4.56597 | overlap 4260085 4260123 TTTGCGCCGCAAAAA GGCA GAGA TGCC ACCCGTGTTGACAAT Rcas_3280 4259222 - 4261204 + | ATPase central domain-containing protein TERM 3158 4261226 - 4261254 + F 100 -13.9 -4.8622 | CGCATGCGGTGAACG CCCCCACGGGT CTCGGGA ACTCGTGGGGG TTTTTGGTTGGGAGG Rcas_3281 4261807 - 4262766 + | NAD-dependent epimerase/dehydratase Rcas_3282 4262763 - 4263875 + | nucleotidyl transferase TERM 3159 4264106 - 4264083 - g 73 -8.9 -4.00868 | gap 1, overlap 4264078 TGACCGATAACGAAA CGCTGGCGCA TCTGC TGCGCCA-CG ACTCGACCTATGGCG Rcas_3283 4263962 - 4265005 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3160 4265063 - 4265007 - T 95 -12.2 -4.26202 | gap 2, overlap 4265003 4265008 4265010 4265012 AGATGGAGGAATAAA CCATACCCGCCGGAGCGACGGCAGACAT GGC ATTGCAGCGG-CGCTCCGGCGGGGA-GG ATCATACACCGTCCG TERM 3161 4265063 - 4265008 - T 74 -12.4 -3.14998 | gap 1, overlap 4265003 4265007 4265010 4265012 GATGGAGGAATAAAC CATACCCGCCGGAGCGACGGCAGACAT GGC ATTGCAGCGG-CGCTCCGGCGGGGAGG ATCATACACCGTCCG TERM 3162 4265061 - 4265010 - T 78 -13.6 -3.12942 | gap 1, overlap 4265003 4265007 4265008 4265012 TGGAGGAATAAACCA TACCCGCCGGAGCGACGGCAGACAT GGC ATTGCAGCGG-CGCTCCGGCGGGGA GGATCATACACCGTC TERM 3163 4265059 - 4265012 - T 83 -16.2 -3.11832 | gap 1, overlap 4265003 4265010 4265007 4265008 GAGGAATAAACCATA CCCGCCGGAGCGACGGCAGACAT GGC ATTGCAGCGG-CGCTCCGGCGGG GAGGATCATACACCG Rcas_3284 4265896 - 4265096 - | hypothetical protein Rcas_3285 4266745 - 4266206 - | hypothetical protein Rcas_3286 4268048 - 4267266 - | hypothetical protein TERM 3164 4268306 - 4268255 - H 90 -19.4 -3.11812 | gap 1, opp_overlap 4268252 4268261, overlap 4268241 4268262 ACGGAGAGCACGGAA GAGACGA-GCGCGCCGTCGGCGCGC GGG GGGCGCCAACGACGCGCCTCTACTC CCCCGTTCTTCTCCT TERM 3165 4268261 - 4268299 + H 79 -15.8 -2.79133 | opp_overlap 4268241 4268255 4268262, overlap 4268252 AGCACGGAAGAGACG AGCGCGCCGTCGGCGCGC GGG GGGCGCCAACGACGCGCC TCTACTCCCCCGTTC TERM 3166 4268298 - 4268262 - H 100 -23.7 -2.76322 | opp_overlap 4268261 4268252, overlap 4268241 4268255 GCACGGAAGAGACGA GCGCGCCGTCGGCGCGC GGG GGGCGCCAACGACGCGC CTCTACTCCCCCGTT Rcas_3287 4268381 - 4268884 + | ferroxidase TERM 3167 4269171 - 4269159 - T 73 -10.5 -3.59262 | GCTGAGATCGTGAAA GCCCC TGC GGGGC TGGACCGTGTGCCGG TERM 3168 4269304 - 4269292 - T 78 -10.5 -3.889 | GCTAAGGACACGAAA GCCCC TGT GGGGC TGACCTGGGCGCTGG TERM 3169 4269391 - 4269445 + T 100 -21.4 -3.53012 | opp_overlap 4269377 4269405 ACGCTGCGGGCTGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3170 4269572 - 4269626 + T 100 -21.4 -3.53012 | opp_overlap 4269558 4269586 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3171 4269753 - 4269807 + T 100 -21.4 -3.53012 | opp_overlap 4269739 4269767 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3172 4269934 - 4269988 + T 100 -21.4 -3.53012 | opp_overlap 4269920 4269948 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3173 4270115 - 4270169 + T 100 -21.4 -3.53012 | opp_overlap 4270101 4270129 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3174 4270284 - 4270338 + T 100 -21.4 -3.53012 | opp_overlap 4270270 4270298 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC TERM 3175 4270465 - 4270519 + T 100 -21.4 -3.53012 | opp_overlap 4270451 4270479 ACGCTGCGGGCGGAA GCCCGCGCTGAGAACCTGCAAGCCCC GCA GGGGCTTCCATGTCCTGAGCGAGGGC TTTAGCCCGCAGCCC Rcas_3288 4272114 - 4270864 - | CRISPR-associated TM1812 family protein Rcas_3289 4274222 - 4272123 - | hypothetical protein TERM 3176 4273356 - 4273338 - G 75 -3.1 -4.86731 | TTCTTTGAAATAAAA GAAACGC TCATT GCGTTTT GTCTCGATAGTGCAG TERM 3177 4273390 - 4273403 + g 76 -6.7 -4.4281 | GTTATTTTCACCCAC CCCTT AACC AAGGG TTTGTTGTACTTTAG Rcas_3290 4276784 - 4274685 - | hypothetical protein TERM 3178 4275799 - 4275787 - G 80 -6.2 -4.77165 | opp_overlap 4275767 CCTTCGACAATAAAA CGGC TGAAG GCCG GCTCTGTGCCCTGCG Rcas_3291 4277446 - 4276781 - | hypothetical protein Rcas_3292 4279311 - 4277443 - | hypothetical protein Rcas_3293 4281645 - 4279315 - | hypothetical protein Rcas_3294 4283270 - 4281642 - | hypothetical protein TERM 3179 4283189 - 4283169 - G 84 -15.5 -3.33162 | GACGCTACGGCAGAA GCGAGTCAG CAA CTGACTCGC CCCGACCACTTCGCG Rcas_3295 4285025 - 4283292 - | hypothetical protein TERM 3180 4283403 - 4283423 + g 72 -4 -4.66609 | AGCAGCAACCATACC TGGATAGA AATGC TCTAACCA TTTTTGGATAAACTC Rcas_3296 4286058 - 4285180 - | LuxR family transcriptional regulator TERM 3181 4285272 - 4285286 + g 74 -5.6 -4.4727 | opp_overlap 4285265, overlap 4285274 ATGCAACACGGCACT CAGCCA GGA TGGCAG TTTTGTGCGTATTGA TERM 3182 4285522 - 4285507 - G 75 -11.8 -3.6543 | overlap 4285505 CAACGCCGGAAAATA GGCGCC CCAC GGCGCC AGTGGCGCCTGAATC Rcas_3297 4286214 - 4287389 + | hypothetical protein TERM 3183 4287837 - 4287816 - g 76 -8.1 -4.12456 | gap 1 AGATGATTTTCAAAA GGTCGTCGAT TAT ATCGA-GACC AACTACGTGCGCCAG Rcas_3298 4287700 - 4289205 + | CRISPR-associated Cst1 family protein Rcas_3299 4289294 - 4290385 + | CRISPR-associated autoregulator DevR family protein protein TERM 3184 4290654 - 4290690 + G 74 -13.7 -2.8789 | opp_overlap 4290636, overlap 4290645 4290647 4290657 CCGGCGGCGAGCGCA AGGCGCTGGAAGGGAAT GTC AATCCCTTCCGGCGTCG TATCCTGCTCTTTCC TERM 3185 4290657 - 4290687 + G 80 -16.2 -2.68259 | opp_overlap 4290636, overlap 4290654 4290645 4290647 GCGGCGAGCGCAAGG CGCTGGAAGGGAAT GTC AATCCCTTCCGGCG TCGTATCCTGCTCTT TERM 3186 4290996 - 4291008 + G 79 -9.1 -4.11216 | AACGGGTGACGACGG CGCAG ATG CTGCG TTTTGACGATCAGAC Rcas_3300 4290395 - 4291132 + | CRISPR-associated Cas5 family protein TERM 3187 4291971 - 4291997 + G 81 -10.2 -4.16943 | gap 1 TATTGGGCACTCGGT GATG-GCGCCG CACCTC CGGCGCGCATC TTTTACACTCTGCCC TERM 3188 4292363 - 4292380 + G 78 -6.9 -4.60949 | GATGCGGTATCTACG CGAGCAG TTCG CTGCACG TTTCTTTGTGATGTC TERM 3189 4292779 - 4292741 - g 73 -13 -3.14132 | opp_overlap 4292739 GCGCTGCGGTAGTAA TGTCACGCCACGACCGCC GCT GGCGCTCGTGGCGACGCA GGTGGTTGAGGTGAG Rcas_3301 4291110 - 4293449 + | CRISPR-associated helicase Cas3 TERM 3190 4293853 - 4293892 + G 77 -14.2 -2.94322 | gap 1, opp_overlap 4293854 4293857, overlap 4293850 GGCGCCTCCAGGAAA ACAATGGACGGCGCGGCGC GGT GCGCCTCGCCG-CCATCGA TGCTTTCAATCCCCT TERM 3191 4293891 - 4293854 - g 100 -19.9 -4.25104 | gap 1, opp_overlap 4293853 4293850, overlap 4293857 GCGCCTCCAGGAAAA CAATGGACGGCGCGGCGC GGT GCGCCTCGCCG-CCATCG ATGCTTTCAATCCCC TERM 3192 4293888 - 4293857 - g 100 -18 -4.25256 | gap 1, opp_overlap 4293853 4293850, overlap 4293854 CCTCCAGGAAAACAA TGGACGGCGCGGCGC GGT GCGCCTCGCCG-CCA TCGATGCTTTCAATC TERM 3193 4294292 - 4294302 + G 73 -8.2 -4.07568 | overlap 4294281 GATCGGCGGCTTCAT CGGC GAC GCCG TTTTCACCGGCGACC TERM 3194 4294389 - 4294373 - g 76 -5.7 -4.57569 | overlap 4294375 CCACGTCGGCAAAAA CGCCGTC AAA GGCGACG GATGGTACAACGTTG Rcas_3302 4293456 - 4294412 + | hypothetical protein TERM 3195 4295608 - 4295594 - g 77 -12.8 -3.59979 | opp_overlap 4295588 GGCCCGGACGCGAAA CGCGCG GTG CGCGCG ACCGCTTCAATCAGG Rcas_3303 4295005 - 4296021 + | CRISPR-associated Cas1 family protein Rcas_3304 4296101 - 4296358 + | CRISPR-associated Cas2 family protein Rcas_3305 4296351 - 4296947 + | CRISPR-associated Cas4 family protein TERM 3196 4298371 - 4298405 + T 85 -9.2 -4.62069 | opp_overlap 4298363 4298377 4298378, overlap 4298378 CTGAAATTTGCGTTC CCACAAGGTCGCCGTC GAA GACGGCGACTTTCCGA TTTTTCGGCTCGCAG TERM 3197 4298399 - 4298377 - T 81 -13.4 -3.28712 | opp_overlap 4298371 4298378, overlap 4298378 TTTGCGTTCCCACAA GGTCGCCGTC GAA GACGGCGACT TTCCGATTTTTCGGC TERM 3198 4298378 - 4298398 + T 100 -16.9 -3.8046 | opp_overlap 4298377 4298378, overlap 4298371 TTGCGTTCCCACAAG GTCGCCGTC GAA GACGGCGAC TTTCCGATTTTTCGG TERM 3199 4298398 - 4298378 - T 83 -16.9 -2.57132 | opp_overlap 4298378 4298371, overlap 4298377 TTGCGTTCCCACAAG GTCGCCGTC GAA GACGGCGAC TTTCCGATTTTTCGG TERM 3200 4299097 - 4299120 + T 100 -11 -4.91429 | opp_overlap 4299100 CTGAAATATAGCGAT GAAGGGGGGG ATAA CCTTCCCTTC TTTTCTTTCCGATTT TERM 3201 4300029 - 4300073 + T 73 -5 -4.62069 | gap 2, opp_overlap 4300036, overlap 4300039 AGAAGAGCACTGAAA TCCAAAAGAC-GC-CGGGCGTG TTC TACGCCCGCGCCGGCTTTCCGA TTTTTCGGCTCGCAG TERM 3202 4300063 - 4300036 - T 93 -11.3 -4.36595 | gap 1, opp_overlap 4300029 4300039 CACTGAAATCCAAAA GACGCCGGGCGT GTTCT ACGCCCG-CGCC GGCTTTCCGATTTTT TERM 3203 4300280 - 4300291 + T 76 -5.8 -4.62069 | CGGCTCATCGCGCAT TCGG CTTT CCGA TTTTTCGGCTCGCAG TERM 3204 4300771 - 4300758 - T 85 -3.1 -5.30616 | gap 1, opp_overlap 4300759, overlap 4300759 GCACTGAAATAAAAA GGCCTC TGG GAG-CC ATTATAAGGCGCGAA TERM 3205 4301586 - 4301554 - T 76 -9.9 -3.72009 | opp_overlap 4301553, overlap 4301555 AGAAGAGCACTGAAA TCTGTCACTGATGAG ACG CTCATCAGTAACCGC AGCTTTCCGATTTTT TERM 3206 4301585 - 4301555 - T 73 -13.4 -2.82482 | opp_overlap 4301553, overlap 4301554 GAAGAGCACTGAAAT CTGTCACTGATGAG ACG CTCATCAGTAACCG CAGCTTTCCGATTTT TERM 3207 4301791 - 4301774 - T 76 -6.9 -4.47183 | GAGCACTGAAATAAA CTCGCGC GCGC GGGCGAG GAGGGGGTCGTCGGA TERM 3208 4301802 - 4301813 + T 76 -5.8 -4.62069 | GCGAGGAGGGGGTCG TCGG ATTT CCGA TTTTTCGGCTCGCAG TERM 3209 4301873 - 4301885 + T 70 -3.3 -4.62069 | overlap 4301874 CGGTATAAACTGGTG ACGGA CTT TCCGA TTTTTCGGCTCGCAG TERM 3210 4302222 - 4302248 + T 100 -15.2 -4.62069 | opp_overlap 4302222 AGGGAGGGCATGAGA TCGGCAAGCGCA TCG TGCGCTTTCCGA TTTTTCGGCTCGCAG TERM 3211 4302248 - 4302222 - T 77 -15.2 -2.79915 | opp_overlap 4302222 AGGGAGGGCATGAGA TCGGCAAGCGCA TCG TGCGCTTTCCGA TTTTTCGGCTCGCAG TERM 3212 4303209 - 4303160 - T 78 -7.3 -4.68539 | gap 1, overlap 4303179 ATCAAAAGTACAAAA CTTCTTCTCACCGAAAAAATCGAA CTT TCCGATTTTT-CGGCTCGCAGAAG AGCACTGAAATGCTG TERM 3213 4303191 - 4303179 - T 80 -4.1 -5.08824 | overlap 4303160 TTCTCACCGAAAAAA TCGAA CTT TCCGA TTTTTCGGCTCGCAG TERM 3214 4303252 - 4303262 + T 70 -3.2 -4.62069 | CAAGCTGTTGAATCG TTGG TTT CCGA TTTTTCGGCTCGCAG TERM 3215 4304838 - 4304849 + T 76 -5.8 -4.62069 | overlap 4304831 TTCGCTATGTCGGCA TCGG CTTT CCGA TTTTTCGGCTCGCAG TERM 3216 4305032 - 4305049 + T 95 -3.3 -5.64421 | overlap 4305033 AAATTGAACAAAACT TTGGTCG ATAC CGGCCAC TTTTTTCTTTCCGAT TERM 3217 4305751 - 4305778 + T 82 -9 -4.31329 | opp_overlap 4305734 4305744 4305737, overlap 4305736 ACTGAAATCGCTTTT CGCCGCGTTCAG CGCG CTGCGCACGGCG TTTTCCGATTTTTCG TERM 3218 4306704 - 4306732 + T 73 -4.6 -4.62069 | gap 1 TGTTACACTTCATAC TCGGAGA-CTGGC TTCC GCCACCTTTCCGA TTTTTCGGCTCGCAG TERM 3219 4307067 - 4307082 + T 90 -6 -5.16472 | CGCAATCGCGCTCCA CGCCGC AGAC GCAGCG TTTTTTCCGATTTTT TERM 3220 4307722 - 4307744 + T 100 -12.7 -4.31329 | gap 1, overlap 4307714 ATCCTTCCCGGCTTC CCGGC-GCCG GTTC CGGCTGCCGG TTTTCCGATTTTTCG TERM 3221 4308745 - 4308757 + T 70 -3.3 -4.62069 | overlap 4308746 CCGCTCCCGCCCTCC CCGGA CTT TCCGA TTTTTCGGCTCGCAG TERM 3222 4311401 - 4311433 + T 70 -12.5 -2.87553 | opp_overlap 4311397 4311396, overlap 4311401 AGCACTGAAATTTCC GCCCGCGCTGGCGCG CCA CGCGCGGGCGACGGC CTTTCCGATTTTTCG TERM 3223 4311401 - 4311434 + T 85 -12.3 -3.8046 | gap 1, opp_overlap 4311397 4311396, overlap 4311401 AGCACTGAAATTTCC GCCCG-CGCTGGCGCG CCA CGCGCGGGCGACGGCC TTTCCGATTTTTCGG TERM 3224 4312298 - 4312317 + T 85 -12.8 -3.8046 | opp_overlap 4312291 4312294 4312293 4312289, overlap 4312299 GCAAAACAGATCGCG CTCGCGCG CCCG CGCGCGGG TTTCCGATTTTTCGG TERM 3225 4312299 - 4312324 + T 70 -3.1 -4.62069 | opp_overlap 4312291 4312294 4312293 4312289, overlap 4312298 CAAAACAGATCGCGC TCGCGCGCCCG CGCG CGGGTTTCCGA TTTTTCGGCTCGCAG TERM 3226 4312975 - 4312958 - T 81 -14.1 -3.27476 | opp_overlap 4312954 4312953, overlap 4312938 4312935 ATTGCGAAGGAGCAA CCCCCCG CACG CGGGGGG AAGGGTTGTCAAAAC Rcas_3306 4314819 - 4313548 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 3227 4317235 - 4317247 + G 71 -5.5 -4.31835 | CACCAGCAAACCCGG CGTTG GAA CGACG TTTGTTGTCACCCTT TERM 3228 4317300 - 4317271 - g 83 -12.1 -4.07885 | overlap 4317272 CACCCTTCCCGAAAA CCCGGCGCAGGTT GCCG AGCCTGCGCCAGA ATTGAGCGAGGGTGA TERM 3229 4317299 - 4317272 - g 75 -13.4 -3.04517 | overlap 4317271 ACCCTTCCCGAAAAC CCGGCGCAGGTT GCCG AGCCTGCGCCAG AATTGAGCGAGGGTG Rcas_3307 4315115 - 4318126 + | multi-sensor hybrid histidine kinase TERM 3230 4318366 - 4318353 - g 88 -8.1 -4.7373 | CGAGCGGATCAAAAA GCGTC CCGA GACGC GCAACATTCCGATCA Rcas_3308 4318147 - 4318539 + | response regulator receiver protein TERM 3231 4319225 - 4319209 - g 71 -9.3 -3.72576 | overlap 4319191 CCGCTGCTGAGCAAA GCGCCGC AGC GCTGCGC CAGCAGATGCTGACG TERM 3232 4320974 - 4320996 + G 70 -9.8 -3.67564 | overlap 4320963 4320975 CCGGGCGCTGATGCA CCTGCGCTCT CTC GGAGCGCAGA TTTGCATCGATGATT Rcas_3309 4318599 - 4321301 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Rcas_3310 4321333 - 4322139 + | hypothetical protein Rcas_3311 4322511 - 4322170 - | hypothetical protein TERM 3233 4322701 - 4322712 + G 70 -7.2 -4.0896 | overlap 4322701 CGATCTGTCACGCGC CCGC ACAG GCGG TTTTGCCGGCGGTTT Rcas_3312 4322582 - 4323610 + | membrane dipeptidase TERM 3234 4323926 - 4323967 + G 76 -10.7 -3.68761 | gap 1, overlap 4323920 4323916 4323927 4323928 GGCGGCGCTGAATCT TCA-CCACCTGCCCGACGTG GTG CGCGCCGGGCTGGGGGATGG TTCTCGTTTTGGCAT Rcas_3313 4323768 - 4324556 + | nucleotidyl transferase Rcas_3314 4327501 - 4325999 - | hypothetical protein TERM 3235 4327273 - 4327260 - G 73 -6.7 -4.34402 | GTGCGCACATCAAAA CCGAA TGGG TTCGG AGGAGCCGGCATGCT Rcas_3315 4327693 - 4329105 + | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase Rcas_3316 4329492 - 4329136 - | hypothetical protein Rcas_3317 4331550 - 4332833 + | major facilitator transporter Rcas_3318 4332836 - 4333426 + | hypothetical protein TERM 3236 4333625 - 4333609 - g 83 -8 -4.58395 | overlap 4333619 4333622 GCGACCGCTGAAAAA CGCATG GAAAT CATGCG CGACGCACAGACATC Rcas_3319 4333498 - 4334787 + | peptidase S8 and S53 subtilisin kexin sedolisin Rcas_3320 4334784 - 4335197 + | hypothetical protein Rcas_3322 4336129 - 4335437 - | DtxR family iron dependent repressor TERM 3237 4335678 - 4335700 + g 84 -11.2 -4.13767 | overlap 4335679 AGGCGGGTGGTGTGG GGCGGCGGCA GTG TGCCGTCGCG TTTTGGAATCGGCGC TERM 3238 4335679 - 4335699 + g 78 -14.7 -3.08046 | overlap 4335678 GGCGGGTGGTGTGGG GCGGCGGCA GTG TGCCGTCGC GTTTTGGAATCGGCG TERM 3239 4336821 - 4336793 - g 73 -8.8 -4.07885 | gap 2, opp_overlap 4336793, overlap 4336794 GACGGCGGCTGAAAA CGCGCCTGGCGGCG TCA CGCTGCC-G-CGCG CCTGGTTGCGCGACA Rcas_3323 4336197 - 4337285 + | metalloendopeptidase glycoprotease family Rcas_3324 4337611 - 4338345 + | methyltransferase type 11 Rcas_3325 4339332 - 4338358 - | protein-export membrane protein SecF TERM 3240 4338392 - 4338421 + g 82 -10.7 -4.07568 | gap 1, opp_overlap 4338347 4338406 GCGCCCGGCGGGTTG CTGCG-GCGGAACC AGC GGTTCCACTCGCGG TTTTCCCACACCACC Rcas_3326 4340777 - 4339353 - | protein-export membrane protein SecD Rcas_3327 4341768 - 4341001 - | DSBA oxidoreductase TERM 3241 4342381 - 4342401 + G 73 -13.3 -3.15544 | CACTATTGGTCGCTC TGCCGTCAC CGC GTGGCGGCA TTGATGGCGCTGCGC TERM 3242 4344353 - 4344342 - g 80 -5.8 -4.7373 | overlap 4344343 GCAGGCGATCAAAAA TCCG CTGG CGGA AACCTCGAAAGCGGC TERM 3243 4344415 - 4344364 - g 75 -12.2 -3.63968 | gap 1, overlap 4344343 4344365 GCGGAAACCTCGAAA GCGGCGCGCCTGATCAACGCCGAAC GTC GTCTGGCGCTCACC-GGCACGCCGG TCGAAAACTCGGCGC TERM 3244 4344414 - 4344365 - g 78 -15.7 -2.7806 | gap 1, overlap 4344343 4344364 CGGAAACCTCGAAAG CGGCGCGCCTGATCAACGCCGAAC GTC GTCTGGCGCTCACC-GGCACGCCG GTCGAAAACTCGGCG Rcas_3328 4342132 - 4345332 + | non-specific serine/threonine protein kinase TERM 3245 4346539 - 4346524 - g 71 -6 -4.28548 | overlap 4346525 ACTGAGCGACGAAAA GGTGGC ATAC GCCGCC AACGGTCAGCAGCGC Rcas_3329 4345325 - 4346686 + | peptidase M14 carboxypeptidase A TERM 3246 4347176 - 4347190 + G 74 -5.6 -4.46212 | overlap 4347171 ACCGAACACGGCTGG CGCTGG TCG CTGGCG TTTTATCCTGGAAGA Rcas_3330 4346693 - 4347220 + | phosphoglycerate mutase TERM 3247 4347928 - 4347951 + GT 83 -15.2 -3.14132 | opp_overlap 4347916, overlap 4347940 4347944 GCAGCAGGAGCATTG CGCGCGGCGC GCGC GCGGCGCGCG TTGATAGGGCACAAG Rcas_3332 4349236 - 4348343 - | HhH-GPD family protein Rcas_3331 4347661 - 4348410 + | hypothetical protein TERM 3248 4348882 - 4348855 - GT 72 -11.2 -3.31144 | GCGGCAGCGCCAGAA GACGCGCACGCA CCTC TGCGCGCTCGCC AGAAAGCAAACGGGT TERM 3249 4348943 - 4348888 - GT 71 -8.2 -3.85698 | overlap 4348893 CGCGCTCGCCAGAAA GCAAACGGGTTGTGGTGCAATCGTAC TGCT GCACGATCGCACCACAGATGGCGTGC AAACCGGTGGCTTTT TERM 3250 4348938 - 4348893 - GT 72 -7.5 -4.13995 | overlap 4348888 TCGCCAGAAAGCAAA CGGGTTGTGGTGCAATCGTAC TGCT GCACGATCGCACCACAGATGG CGTGCAAACCGGTGG Rcas_3333 4350789 - 4349233 - | hypothetical protein TERM 3251 4350858 - 4350826 - R 95 -15.7 -3.8211 | overlap 4350830 GTGGATGGATAACAA GAAACCGCACGATGA CAG CCATCATGCGGCTTC GAGGCGCAACAACAC TERM 3252 4350854 - 4350830 - R 100 -12.9 -4.52415 | overlap 4350826 ATGGATAACAAGAAA CCGCACGATGA CAG CCATCATGCGG CTTCGAGGCGCAACA Rcas_3334 4351042 - 4350878 - | ribosomal protein L33 TERM 3253 4351361 - 4351344 - g 78 -6.3 -4.63218 | GCGCCGCCAACAAAA TTGCCAA CGGT CTGGCAA ATCTCGGCGTGCGCC Rcas_3335 4351226 - 4352764 + | AMP-dependent synthetase and ligase Rcas_3336 4353665 - 4352886 - | thioredoxin TERM 3254 4353020 - 4353036 + g 71 -5.7 -4.2679 | opp_overlap 4353018 4353019, overlap 4353021 4353031 TCCTGATGCCAAACC GCTGCGC CGT GCGCGGG TTTTCATCCACGTTC Rcas_3337 4355955 - 4353742 - | hypothetical protein TERM 3255 4353865 - 4353852 - G 71 -5.9 -4.2558 | overlap 4353853 4353860 GAGCTTCGATGAAAA CGCGC AAAG GCGCA TGGCGCCAGTGCAGA TERM 3256 4353872 - 4353860 - G 70 -10.5 -3.67068 | overlap 4353853 4353852 ATGAAAACGCGCAAA GGCGC ATG GCGCC AGTGCAGACGAACGC TERM 3257 4354076 - 4354109 + g 70 -13.2 -2.87931 | gap 1 ACCCCCGGCAATGTG CGGTC-GGGATGCGC CTGAT GCGCATCCCAGAACG TGTATGCCCGATCAA Rcas_3338 4356812 - 4356330 - | hypothetical protein TERM 3258 4356977 - 4357034 + G 70 -9.8 -3.57144 | gap 2, opp_overlap 4356955 AGCGCGGGCAGGCGA GACGACTACGCCGCGTTGCCCACATGCG CCAC CGCA-G-GGTCAGTGCGGCGGATGCGTC TTTCAAGATCACGAC TERM 3259 4357808 - 4357838 + G 81 -13.9 -3.59262 | opp_overlap 4357823 TGGCGAGAGTGTGCG CCTGGCGCGCGAG AACAG CGTGCGCGCCGGG TTTGAGCATATCGCC Rcas_3339 4356918 - 4358135 + | (Uracil-5)-methyltransferase Rcas_3340 4358681 - 4360153 + | serine/threonine protein kinase TERM 3260 4360232 - 4360216 - f 74 -12.3 -3.1978 | overlap 4360214 ACGTTGATAGCAATA GCGGCAA CAA TTGCCGC CACCAGAACCGCAAT Rcas_3341 4360428 - 4360898 + | hypothetical protein Rcas_3342 4361339 - 4360911 - | hypothetical protein TERM 3261 4361169 - 4361189 + g 70 -7.5 -4.10552 | CGAGCGCCACTCCAG GTGATGCTC AGC GAGCACCGC TTTCGTTTCCTCGAA TERM 3262 4361794 - 4361823 + r 76 -15.1 -2.64616 | gap 1, overlap 4361785 4361786 TAACGTCGCCGCCTT CGCGCGCT-TTCGG TGG CTGAACAGCGCGCG TGGTATGAATGAGAG TERM 3263 4362044 - 4362027 - R 80 -10.5 -4.0942 | CACGGAGGACACAAA GCCCCGC AAAC GCGGGAC TCACCGGGGAGCGGC Rcas_3343 4363141 - 4362230 - | 6-phosphogluconate dehydrogenase NAD-binding Rcas_3344 4363320 - 4364681 + | hypothetical protein TERM 3264 4364716 - 4364759 + G 76 -10.8 -3.68016 | gap 1, opp_overlap 4364730 4364731, overlap 4364716 4364717 4364724 TCACAGTACGACTCG TCGGCTGGCGAGAACGCGGCG CAG CGCCCCGCTC-CGCTCGCCGC ATTTTTATTGCTGCT TERM 3265 4364716 - 4364760 + G 100 -9.2 -5.15167 | opp_overlap 4364730 4364731, overlap 4364716 4364717 4364724 TCACAGTACGACTCG T-CGGCTGGCGAGAACGCGGCG CAG CGCCCCGCTC-CGCTCGCCGCA TTTTTATTGCTGCTC TERM 3266 4364717 - 4364758 + G 75 -14.3 -2.79725 | gap 1, opp_overlap 4364730 4364731, overlap 4364716 4364716 4364724 CACAGTACGACTCGT CGGCTGGCGAGAACGCGGCG CAG CGCCCCGCTC-CGCTCGCCG CATTTTTATTGCTGC TERM 3267 4365638 - 4365689 + G 73 -10.7 -3.54543 | gap 1, opp_overlap 4365620 TGTTCCTGTACGCGC CGGTGGCGCTGCTGGCGCTGGCGG GGGCG CCGCT-GCTCTGGCGGCGCTGGCG TTTGGAGACATCACT Rcas_3345 4364674 - 4366668 + | hypothetical protein Rcas_3346 4367285 - 4366773 - | hypothetical protein Rcas_3347 4369226 - 4367337 - | peptidoglycan binding domain-containing protein TERM 3268 4368600 - 4368564 - G 71 -10.7 -3.53224 | opp_overlap 4368587 4368588 CATGTGCTGTTCAAA CTCGCCGCCAACCCCTG CGC CAGTCATCGGCGGCGTG GTGACTGAGCCGCCG Rcas_3348 4369623 - 4371668 + | PKD domain-containing protein Rcas_3349 4371865 - 4374093 + | hypothetical protein TERM 3269 4374087 - 4374105 + T 100 -13.2 -4.25104 | opp_overlap 4374078 4374085 AACTGACTCAACACC TCGCTGAG CAT CTCAGCGA TTTTCCTCGCGGCGC Rcas_3350 4374587 - 4374099 - | hypothetical protein TERM 3270 4375102 - 4375137 + r 72 -14.1 -2.65354 | gap 1, overlap 4375099 GTCACCCCGAGCCGC GCGAGGGGTC-GTGCG CGACC CGCACAGATTCCTCGC TGAGTTTACCCTGAG Rcas_3351 4377218 - 4375206 - | hypothetical protein TERM 3271 4375634 - 4375669 + g 71 -11 -3.53343 | gap 1, opp_overlap 4375628 4375630, overlap 4375634 GGTCATTAATACGCA C-GCGCACCTCGCGGGG ATG CCCCCCGCGTTGCGCAG TTTCACGAGCGCGTT Rcas_3352 4377601 - 4377230 - | hypothetical protein Rcas_3353 4377973 - 4377611 - | hypothetical protein Rcas_3354 4380580 - 4378400 - | hypothetical protein TERM 3272 4379877 - 4379822 - G 73 -8.2 -3.96449 | gap 2, overlap 4379819 CAAGATGCCAAAGAA CGCCGCCAGGCGGTGACGCGCCAGCG CCAGCC CGATGAT-CGCCAGCGCC-AGCGGCG CCAGTCCGACGTAGG Rcas_3355 4382125 - 4380902 - | arginine biosynthesis bifunctional protein ArgJ TERM 3273 4381182 - 4381197 + g 78 -10.4 -4.07568 | CCCCAGTTCGGATCG CCGCCA TGGA TGGCGG TTTTCACCAGCGGCG Rcas_3356 4383725 - 4382517 - | argininosuccinate synthase Rcas_3357 4387060 - 4383722 - | carbamoyl-phosphate synthase, large subunit Rcas_3358 4387611 - 4387138 - | histidine kinase A domain-containing protein Rcas_3359 4388889 - 4387729 - | carbamoyl-phosphate synthase, small subunit Rcas_3360 4389440 - 4388925 - | GCN5-related N-acetyltransferase TERM 3274 4389426 - 4389413 - G 77 -4.5 -4.91109 | gap 1, opp_overlap 4389423, overlap 4389414 GCGGCACGACAAAAA CCTGCG ACT CGC-GG ACGTGTACGGTCATT Rcas_3361 4390216 - 4389437 - | acetylglutamate kinase TERM 3275 4389550 - 4389507 - G 78 -14.5 -3.05343 | gap 1, opp_overlap 4389505 4389537 TCCAGATTGGTAATA CGCGCAGCGCGCACACCAGC GTCGA GC-GCCGTGAGCGCCGCGCG CACTTTGGGGATCAT Rcas_3362 4392247 - 4391237 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3276 4391836 - 4391858 + g 73 -12.6 -3.17075 | GATTAGCGATCAGCA TCGCGCCGCG CAG CGCCGCGCGG TTGAGTTCCGGCAAA TERM 3277 4392295 - 4392265 - H 100 -10.5 -4.87133 | gap 1, opp_overlap 4392266, overlap 4392266 ACCCTCCAAAGAAAA GCCCTTCGGAC-CA TTTC TGTGTCCGAAGGGT GTATCATCACGTTGA TERM 3278 4392294 - 4392266 - H 86 -14 -3.51557 | gap 1, opp_overlap 4392266, overlap 4392265 CCCTCCAAAGAAAAG CCCTTCGGAC-CA TTTC TGTGTCCGAAGGG TGTATCATCACGTTG TERM 3279 4392266 - 4392294 + H 75 -14 -2.95223 | gap 1, opp_overlap 4392266 4392265 CCCTCCAAAGAAAAG CCCTTCGGAC-CA TTTC TGTGTCCGAAGGG TGTATCATCACGTTG TERM 3280 4392495 - 4392524 + H 100 -16.3 -4.3255 | opp_overlap 4392479 4392474 GGCGCCGGGCATTCG GGGCGCCGCCGCG CGGG CGCGGGCGCGCCC TTTGTTCGTTCAGCC Rcas_3363 4392649 - 4393734 + | phosphoserine aminotransferase Rcas_3364 4393749 - 4395866 + | ADP-ribosylation/crystallin J1 Rcas_3365 4396579 - 4395875 - | methyltransferase GidB Rcas_3366 4397202 - 4396603 - | nicotinate (nicotinamide) nucleotide adenylyltransferase Rcas_3367 4397450 - 4397199 - | hypothetical protein Rcas_3368 4398409 - 4397456 - | hypothetical protein Rcas_3369 4398991 - 4398428 - | hypothetical protein TERM 3281 4399118 - 4399078 - R 76 -6.1 -4.67607 | opp_overlap 4399081 4399086, overlap 4399081 GTCTGAACAAATAAA TCAGTCAAGTCCGCGCCAT AAC AGGACACGGACTTTACCTA TTGTAAACCTTAGAC Rcas_3370 4400142 - 4399222 - | band 7 protein Rcas_3371 4401128 - 4400139 - | band 7 protein TERM 3282 4401506 - 4401545 + G 75 -12 -3.59979 | gap 1, overlap 4401508 GCGCTCCCGACGTGC TGGTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCCTA TTTGCAGTGGGAAGA TERM 3283 4401508 - 4401543 + G 72 -12.4 -3.38046 | gap 1, overlap 4401506 GCTCCCGACGTGCTG GTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCC TATTTGCAGTGGGAA TERM 3284 4401889 - 4401850 - g 70 -12.1 -3.14931 | gap 1 CTGACCTTTGAGGAA CTGGCGCAGGCGCGCGCT GCCGA AGCGCGCGCGCGAGC-AG AAGCGGAAGCGCGTG Rcas_3372 4401289 - 4402068 + | hypothetical protein TERM 3285 4402326 - 4402365 + G 75 -12 -3.59979 | gap 1, overlap 4402328 GCGCTCCCGACGTGC TGGTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCCTA TTTGCAGTGGGAAGA TERM 3286 4402328 - 4402363 + G 72 -12.4 -3.38046 | gap 1, overlap 4402326 GCTCCCGACGTGCTG GTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCC TATTTGCAGTGGGAA Rcas_3373 4402109 - 4402846 + | hypothetical protein TERM 3287 4403104 - 4403143 + G 75 -12 -3.59979 | gap 1, overlap 4403106 GCGCTCCCGACGTGC TGGTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCCTA TTTGCAGTGGGAAGA TERM 3288 4403106 - 4403141 + G 72 -12.4 -3.38046 | gap 1, overlap 4403104 GCTCCCGACGTGCTG GTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCC TATTTGCAGTGGGAA TERM 3289 4403609 - 4403582 - g 76 -14 -3.19246 | overlap 4403562 GCAACGGGAAGCCAA GGCGCGCGCCGC CGCT GAGGAGCGCGCC GCACGGCTGGCGGAG Rcas_3374 4402887 - 4403666 + | hypothetical protein TERM 3290 4403924 - 4403963 + G 75 -12 -3.59979 | gap 1, overlap 4403926 GCGCCCCCGACGTGC TGGTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCCTA TTTGCAGTGGGAAGA TERM 3291 4403926 - 4403961 + G 72 -12.4 -3.38046 | gap 1, overlap 4403924 GCCCCCGACGTGCTG GTCGCCATCGGACGCCC CAA GGGCGACCGC-GGCGCC TATTTGCAGTGGGAA Rcas_3375 4403707 - 4404444 + | hypothetical protein TERM 3292 4405425 - 4405403 - g 95 -16.2 -3.90112 | opp_overlap 4405400 CTGCGCGCAACGAAA CCGGAGCCGC CGC GCGGCGCCGG GCATGTTCCGCCGCT Rcas_3376 4404431 - 4406410 + | UvrD/REP helicase Rcas_3377 4406893 - 4407714 + | alpha/beta hydrolase fold TERM 3293 4407900 - 4407854 - g 71 -13.8 -2.63596 | gap 1, overlap 4407893 GCGGAGGCGACATCA GCGTGCCGCCGCCGCCGAATG CCCGGC CATTCGAGAGCAGCGGCA-GC CCCAAGATCGATCAG Rcas_3378 4407778 - 4408215 + | hypothetical protein Rcas_3379 4408234 - 4408437 + | hypothetical protein Rcas_3380 4408434 - 4408691 + | hypothetical protein Rcas_3381 4408935 - 4409804 + | serine/threonine protein kinase Rcas_3382 4411498 - 4410002 - | proton-translocating NADH-quinone oxidoreductase, chain N TERM 3294 4410304 - 4410276 - G 71 -8.7 -3.86194 | overlap 4410277 4410279 AACTTCCCCCAGAAA CCACCGGTCGGCG GGA CGCCAGCCAGCGA GAGCATACAAACTGC Rcas_3383 4413036 - 4411513 - | proton-translocating NADH-quinone oxidoreductase, chain M TERM 3295 4411996 - 4411978 - G 76 -8.1 -4.12254 | opp_overlap 4411977 CACCACCAGAAACAA TGCGCCG GTTGT CAGCGCA CTATTGACCATATGT Rcas_3384 4415006 - 4413042 - | proton-translocating NADH-quinone oxidoreductase, chain L Rcas_3385 4415377 - 4415075 - | NADH-ubiquinone oxidoreductase chain 4L Rcas_3386 4416060 - 4415548 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TERM 3296 4415831 - 4415803 - G 70 -10.1 -3.64703 | CCGCTGCCAGGCAAA CCGTTCGCGCGTA TCC TCCGCGCGCTCGG CGCCAAGCAACATCA Rcas_3387 4416571 - 4416074 - | NADH-quinone oxidoreductase, chain I TERM 3297 4416314 - 4416280 - G 72 -4.2 -4.56961 | overlap 4416281 AATACCCACAGAAAA TGCAGCGCAGCATG TTGATTT CATAGCGCGCTGCG TACCGTTCGCCTGGC Rcas_3388 4417785 - 4416613 - | NADH dehydrogenase (quinone) Rcas_3389 4420553 - 4417782 - | NADH-quinone oxidoreductase, chain G TERM 3298 4419535 - 4419575 + g 86 -8.9 -4.56597 | gap 1, overlap 4419539 GGACCCGCCAGCCCG CCCAGCGCCG-CCGCGCC AGCGTG GGTGCGGATGGCGCTCAG TTTTTCAGCCACCAG TERM 3299 4419539 - 4419571 + g 70 -12.7 -2.83903 | gap 1, overlap 4419535 CCGCCAGCCCGCCCA GCGCCG-CCGCGCC AGCGTG GGTGCGGATGGCGC TCAGTTTTTCAGCCA Rcas_3390 4421158 - 4420565 - | response regulator receiver protein Rcas_3391 4422523 - 4421168 - | NADH-quinone oxidoreductase, F subunit TERM 3300 4421728 - 4421760 + g 71 -5.4 -4.42386 | overlap 4421730 CGGGGCGCTTCACGT GACCGGAGACGGAG AACAC CTTCGTGCCCGGAC TTTTCTCCGTGCCGA TERM 3301 4422546 - 4422581 + H 82 -11.2 -3.92542 | opp_overlap 4422566, overlap 4422526 4422547 GTGTACTCTACCACC ACGCAGGCTTTGTGTC AAAT GGCACAAAGTTTGCGC TTGTTTGCGGATGAG TERM 3302 4422547 - 4422580 + H 79 -14.7 -2.95204 | opp_overlap 4422566, overlap 4422526 4422546 TGTACTCTACCACCA CGCAGGCTTTGTGTC AAAT GGCACAAAGTTTGCG CTTGTTTGCGGATGA TERM 3303 4422689 - 4422713 + G 81 -10 -4.19238 | gap 1 AAATTGCGCTTCTCT CCGAGTCGCCG TCGG TGGCGAC-CGG TTTTGGCATTCACGC TERM 3304 4422973 - 4422995 + G 71 -4.9 -4.46212 | gap 1 GTGCGCGCTGCGGGA TGGACAGGTC CAAT GATCTG-CCA TTTTGTCATCGACAC Rcas_3392 4422670 - 4423890 + | hypothetical protein Rcas_3393 4423906 - 4425051 + | N-methyltryptophan oxidase Rcas_3394 4426891 - 4425032 - | hypothetical protein Rcas_3395 4428228 - 4427098 - | hypothetical protein TERM 3305 4428570 - 4428612 + r 88 -13.5 -3.59979 | overlap 4428571 4428573 ATTGTCACCTCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 3306 4428571 - 4428611 + r 84 -17 -2.75844 | overlap 4428570 4428573 TTGTCACCTCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 3307 4428573 - 4428608 + r 85 -18.4 -2.65354 | gap 1, overlap 4428571 4428570 GTCACCTCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_3396 4429340 - 4428678 - | adenylate kinase Rcas_3397 4430061 - 4429366 - | translin family protein TERM 3308 4429468 - 4429440 - G 76 -13.9 -3.14132 | opp_overlap 4429439 4429435, overlap 4429442 CGGCGTGCCCATCAA GACGGCGCTCGAA GCG TTCGAGCGCCATA ATCAGTTGATCCTGC TERM 3309 4429466 - 4429442 - G 86 -16.5 -3.13403 | opp_overlap 4429439 4429435, overlap 4429440 GCGTGCCCATCAAGA CGGCGCTCGAA GCG TTCGAGCGCCA TAATCAGTTGATCCT TERM 3310 4429869 - 4429890 + g 71 -12.9 -3.05384 | CAAGGCTCTCACGCA GCGCGCGCG CTGA CGCGCCCGC TTCCGTCAGCAACGC Rcas_3398 4430214 - 4432010 + | ABC transporter related Rcas_3399 4432250 - 4433230 + | deoxyhypusine synthase Rcas_3400 4433208 - 4433450 + | hypothetical protein Rcas_3401 4433451 - 4433738 + | hypothetical protein TERM 3311 4434086 - 4434063 - f 71 -8.8 -3.83998 | gap 1 CCACGCCAGAGGAAA CGAC-GGCAGC AAC GCCGCCTGCCG CACCCGAACCTGCCG Rcas_3402 4434144 - 4434323 + | hypothetical protein Rcas_3403 4434822 - 4434535 - | hypothetical protein Rcas_3404 4435090 - 4435701 + | endopeptidase Clp Rcas_3405 4436777 - 4435704 - | alpha/beta hydrolase fold Rcas_3406 4436855 - 4437634 + | enoyl-(acyl-carrier-protein)-like protein Rcas_3407 4438841 - 4437618 - | hypothetical protein TERM 3312 4437731 - 4437686 - G 74 -13.4 -2.88861 | gap 3, opp_overlap 4437724, overlap 4437722 4437724 TATGATCCCCAGAGA CCGGCGCCTG-ATCG--GGTTGG ACG CCATCCGACGACACAGGCGCCGG CACATCAGGCGCAGG TERM 3313 4437752 - 4437722 - G 81 -16.1 -2.79796 | opp_overlap 4437724, overlap 4437686 4437724 CGCCATCCGACGACA CAGGCGCCGGCAC ATCAG GCGCAGGCGCCTG TTCGAGCGGCAAATC TERM 3314 4437750 - 4437724 - G 70 -12.9 -2.94747 | opp_overlap 4437724, overlap 4437686 4437722 CCATCCGACGACACA GGCGCCGGCAC ATCAG GCGCAGGCGCC TGTTCGAGCGGCAAA Rcas_3408 4439439 - 4439176 - | cell division topological specificity factor MinE Rcas_3409 4440320 - 4439508 - | septum site-determining protein MinD Rcas_3410 4441038 - 4440361 - | septum site-determining protein MinC Rcas_3411 4442316 - 4441150 - | aminotransferase class I and II Rcas_3412 4442413 - 4443648 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Rcas_3413 4443656 - 4444765 + | HEAT repeat-containing PBS lyase Rcas_3414 4444784 - 4445893 + | aminodeoxychorismate lyase TERM 3315 4446537 - 4446503 - g 71 -9.1 -3.73775 | opp_overlap 4446503 4446502 4446526 GGCATCGCGACGAAA CCCCGCTGCCGGGCT ATCTG ATCCCGGCGACGGCG CTGGTGTTCGACATG Rcas_3415 4445878 - 4446729 + | shikimate 5-dehydrogenase Rcas_3416 4446741 - 4447505 + | peptidase A24A domain-containing protein TERM 3316 4447626 - 4447647 + G 71 -5.7 -4.28254 | opp_overlap 4447612 4447626 ACCTGTGCTATGCAA CGGCTGACA CTGC TGGCTGCCG TTTTCGGTATTGCCC Rcas_3417 4447620 - 4451195 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3317 4451536 - 4451579 + T 72 -11.1 -3.33815 | gap 2 CGCGCGCGGCGCTGA TCTCCTCGCTCCC-G-CGTGC GGGA GCGTGGCAGGGGGTGAGGAGA TTGCTTCGACCGGCT Rcas_3418 4454066 - 4452705 - | hypothetical protein Rcas_3419 4456794 - 4454095 - | multi-sensor signal transduction histidine kinase Rcas_3420 4459203 - 4457044 - | multi-sensor signal transduction histidine kinase TERM 3318 4458370 - 4458358 - G 74 -4.7 -4.63932 | overlap 4458359 GATTTTGGAATAAAA TCGCG GAT CGCGG GTGACATCGTGCACG Rcas_3421 4460748 - 4459336 - | UDP-glucose/GDP-mannose dehydrogenase TERM 3319 4460340 - 4460363 + g 100 -10.2 -4.71426 | CCCGTTCCAGCTGCC GCGCTGTGCC AATC GGCACTGTGC TTTTGTTGATCACCA Rcas_3422 4462168 - 4460780 - | FHA domain-containing protein TERM 3320 4461123 - 4461103 - G 78 -5.3 -4.70659 | opp_overlap 4461115, overlap 4461106 CCTGATACCGAAAAA GGAGCGCAA TCG CCGCGCTGC GCGGTTTGCTGATCG TERM 3321 4461115 - 4461127 + g 74 -10.5 -3.80573 | opp_overlap 4461103 4461106 AAAGGAGCGCAATCG CCGCG CTG CGCGG TTTGCTGATCGTCGC Rcas_3423 4464523 - 4462226 - | multi-sensor signal transduction histidine kinase Rcas_3424 4465611 - 4464685 - | transporter DMT superfamily protein Rcas_3425 4465747 - 4465995 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Rcas_3426 4465992 - 4466411 + | hypothetical protein Rcas_3427 4467089 - 4466418 - | Crp/FNR family transcriptional regulator TERM 3322 4467306 - 4467334 + H 100 -3.6 -5.95539 | opp_overlap 4467293 4467301 CATGAGGAGATTCCT CGCTGCGCTCGG AATGA CAAGGCGCTGCG TTTTTTTCTTTCGCA TERM 3323 4467437 - 4467465 + H 100 -3.6 -5.95539 | opp_overlap 4467437 ACAGGCGCAAAACAT CGCTGCGCTCGG AATGA CAAGGCGCTGCG TTTTTTTCTTTCGCA Rcas_3428 4467978 - 4468406 + | peptidylprolyl isomerase FKBP-type TERM 3324 4470021 - 4469992 - g 73 -8.5 -4.0896 | gap 1, opp_overlap 4470005 AAACCGGGCGCAAAA TCCTGGCGGCATGC GTC GC-TGCCGGCGGGA GCATCACCGGCGAGC TERM 3325 4471415 - 4471390 - g 70 -10.3 -3.55563 | opp_overlap 4471391 4471392, overlap 4471391 ACCGGATGCGCGAAA TGCGTCGGCGC TGGG GCGCCGACGGT TTGCTCAATCCTGGA TERM 3326 4471414 - 4471391 - g 72 -13.8 -2.73124 | opp_overlap 4471391 4471392, overlap 4471390 CCGGATGCGCGAAAT GCGTCGGCGC TGGG GCGCCGACGG TTTGCTCAATCCTGG TERM 3327 4471391 - 4471414 + G 84 -13.8 -3.77196 | opp_overlap 4471391 4471390, overlap 4471392 CCGGATGCGCGAAAT GCGTCGGCGC TGGG GCGCCGACGG TTTGCTCAATCCTGG TERM 3328 4471392 - 4471413 + G 87 -17.3 -2.85996 | opp_overlap 4471391 4471390, overlap 4471391 CGGATGCGCGAAATG CGTCGGCGC TGGG GCGCCGACG GTTTGCTCAATCCTG Rcas_3429 4468782 - 4471445 + | D-lactate dehydrogenase (cytochrome) TERM 3329 4472279 - 4472300 + G 74 -5.1 -4.56597 | gap 1 TACATCGCGCGGGAT GCCC-GATTG GGG CAAGCAGGGC TTTTTCACGAAGGAG Rcas_3430 4471569 - 4473641 + | hydroxylamine reductase TERM 3330 4473744 - 4473730 - T 71 -6.4 -4.24294 | AGCAATGACCCAAAA CCTGAA CCA TCCAGG ATACGGAGCGGCAGA TERM 3331 4473968 - 4473928 - T 100 -26.3 -2.78596 | overlap 4473931 GATCGCTCTACGAGA GCATTGGGACGGCGAAGGC ATC GCCTTCGCCGTCCCAACGT CTGAACGGGTGGGTC TERM 3332 4473965 - 4473931 - T 100 -28.8 -2.66316 | overlap 4473928 CGCTCTACGAGAGCA TTGGGACGGCGAAGGC ATC GCCTTCGCCGTCCCAA CGTCTGAACGGGTGG Rcas_3431 4475009 - 4473996 - | dTDP-glucose 4,6-dehydratase TERM 3333 4474990 - 4474978 - G 85 -10.5 -4.36914 | TTGCTGCCGATAAAA CCGGC GCC GCCGG TGACCAGGATGTTCC Rcas_3432 4478124 - 4475230 - | N-acetylmuramoyl-L-alanine amidase TERM 3334 4478454 - 4478396 - H 90 -19 -3.09492 | gap 1, overlap 4478373 TGGGCAATCTCAAGA TCGGCGCCGGCTTCGACAGGCTCAGCC AACGGG GGTTGAGCTTGCCGAAACCGACGCC-A ACAACTCAACGTTCT TERM 3335 4479340 - 4479371 + G 76 -13 -3.42574 | gap 1 GCTGCTGCGCGAACT TCCCGAACCGCAGGC GGC GCTGGCGG-TCGGGA TTCTGCTGGGGTTGC Rcas_3433 4478717 - 4480201 + | ComEC/Rec2-related protein Rcas_3434 4482467 - 4480215 - | methyl-accepting chemotaxis sensory transducer Rcas_3435 4483736 - 4483035 - | hypothetical protein TERM 3336 4483294 - 4483307 + g 83 -9.5 -4.35483 | opp_overlap 4483278 4483276 4483291, overlap 4483293 TCGCGCACACCATTG CGCGC ATAC GCGCG TTTCTTGTCGTACAG Rcas_3436 4484957 - 4484124 - | LmbE family protein TERM 3337 4484819 - 4484829 + g 71 -8.2 -3.91897 | overlap 4484809 CTTCGGTCTGATGCC CGGC ATC GCCG TTTGTGACTGAGACG Rcas_3437 4486968 - 4484968 - | hypothetical protein TERM 3338 4486378 - 4486352 - G 81 -6.5 -4.72272 | opp_overlap 4486363 TCGGCTGACGAAAAA TACCCGCCTGC TCCGC GAATGCGGGTA TTGAGAATCGTCAGT TERM 3339 4487357 - 4487337 - R 72 -12.5 -3.05844 | TGCGCCATTGCAACA CGCCTGCGC TGA GCGCACGCG CCACGCTCTGGCACA Rcas_3438 4487690 - 4487433 - | hypothetical protein TERM 3340 4488604 - 4488592 - g 71 -5.5 -4.30441 | CGAGAACACCGAAAA GACGA TCG CCGTC GAAGCCATGATGCGC TERM 3341 4489244 - 4489284 + G 71 -4.6 -4.43844 | GAGTTTATGGCAGCG CGGATGCTCGCCGGTTCG CGGCT CAAGTCGCCGATCATCTG TTTTGTCGGTCCTCC Rcas_3439 4488170 - 4490680 + | ATP-dependent protease La TERM 3342 4491482 - 4491467 - g 76 -10.4 -3.85817 | ATCTGCTCGCAGAAA CGCTCG GTTT CGAGCG CGAGCGGATCGCCGG Rcas_3440 4490680 - 4491612 + | aminoglycoside/hydroxyurea antibiotic resistance kinase TERM 3343 4492097 - 4492121 + G 79 -11.3 -3.9122 | opp_overlap 4492074 GACTCTGCCGGCGCT GCCGCTAGCCG ATC TGGCGGGCGGC TTATTTGCCGCACTG TERM 3344 4492391 - 4492405 + G 79 -9.2 -4.11484 | overlap 4492388 CGCAGTTGGACGGAG CGCGTG GCG CGCGCG TTTTGCCGAGTTCGA Rcas_3441 4491609 - 4492652 + | L-carnitine dehydratase/bile acid-inducible protein F Rcas_3442 4492677 - 4493531 + | SecC motif-containing protein TERM 3345 4494806 - 4494859 + F 86 -15.2 -3.28712 | gap 3 GGCGCGCCCCGCCAT CGCCAGGCAGTGCGGCGGAGCGC-CCG CCA CGGCGCGCCCCGCCAT-C-GCCAGGCG TTGTGCCGCAGGCGC Rcas_3443 4495036 - 4497003 + | hypothetical protein Rcas_3444 4497290 - 4497853 + | CopG/DNA-binding domain-containing protein Rcas_3445 4499248 - 4499919 + | phosphoglycerate mutase TERM 3346 4500020 - 4500008 - T 78 -10.5 -3.86202 | GTTGAGGACATGAAA GCCCC GCT GGGGC TACTGATGCCACTGC TERM 3347 4500536 - 4500486 - T 88 -13.8 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGCGGAATCTGACCGCGCG CAG CGCGGAATCTGACCGCGCGCAGCG CGGAATCTGCGCGGG TERM 3348 4501580 - 4501565 - T 71 -6 -4.40173 | opp_overlap 4501566, overlap 4501558 4501566 ATCAGAAACCGAAAA CCGGCG CTAT CGCCGT TAATTTTTGTTGATG TERM 3349 4501566 - 4501579 + T 73 -9.5 -3.94974 | opp_overlap 4501558 4501565 4501566 TCAGAAACCGAAAAC CGGCG CTAT CGCCG TTAATTTTTGTTGAT Rcas_3446 4503349 - 4501580 - | SCP-like extracellular TERM 3350 4503422 - 4503441 + H 78 -2.7 -5.14477 | opp_overlap 4503416, overlap 4503423 ATGTATAATGGCCGC AGGCGGG TTGTGT TCCGCCC TTTTTTGAGTATATA Rcas_3447 4503478 - 4504242 + | RDD domain-containing protein Rcas_3448 4505194 - 4504301 - | histone deacetylase superfamily protein TERM 3351 4504986 - 4505004 + g 74 -2.2 -4.85599 | overlap 4504954 4504986 ATCTGGCGCATCTCG CGGTCGCT TAT GGCGCCGG TTTTTATGCGATGCA Rcas_3449 4506825 - 4505191 - | ATP dependent DNA ligase TERM 3352 4506917 - 4506939 + H 76 -9.9 -3.76568 | gap 1, overlap 4506912 4506935 TGGATCGTCACGCCA CGGC-TTCGC CAGC GCGAACGCCG TTGTGTTGTGCGTGA TERM 3353 4507127 - 4507169 + G 75 -11.9 -3.60792 | gap 2 GAGCCTCTCGCTCGA CGCC-GCAGCGC-GCGTCCGT CCC ACGCCCGCCGCGCCGCTGGCG TTTCCGACTTCGACG TERM 3354 4507285 - 4507316 + G 73 -11.4 -3.55444 | TTGCGTTCCCAACTC CGCCGGTGACGCCG CCCG CCGCGCCGTCGGCG TTTCCGACCTCGCCG TERM 3355 4507550 - 4507512 - g 91 -19.4 -3.05384 | overlap 4507496 CCGCGCCTGACCCAA GCCGCGCGCCGCCTGGCC TAC GACCTCGCCGCGCGCGGC ACAGTCAGTCACATC TERM 3356 4507892 - 4507862 - g 86 -16.1 -3.14132 | gap 1 CCTGGCGCGCATCAA CGCGCTGCGCGCCG AGCG CGGCGCGCCGC-CG TTGACCCTCAACGCC Rcas_3450 4507059 - 4508276 + | SCP-like extracellular TERM 3357 4508385 - 4508430 + G 80 -14.7 -3.14132 | gap 1, overlap 4508388 ACCTTGCTGACCTTC GTGGTCATCCCCGCCGCCATCG CGG CGATAGCGGCGGCG-TGGCTGC TTCGTCCGCAGGCGA TERM 3358 4508388 - 4508427 + G 75 -15 -2.77899 | gap 1, overlap 4508385 TTGCTGACCTTCGTG GTCATCCCCGCCGCCATCG CGG CGATAGCGGCGGCG-TGGC TGCTTCGTCCGCAGG TERM 3359 4508474 - 4508504 + G 70 -12.4 -3.14132 | CCTCGGCGACCCGAA CGCGCCGGTCGTCG CCG CGACGCCCGCCCCG TTCGTCGGCGGACAG Rcas_3451 4508337 - 4508891 + | hypothetical protein Rcas_3452 4508891 - 4509154 + | hypothetical protein Rcas_3453 4512013 - 4510571 - | carbohydrate kinase FGGY Rcas_3454 4514218 - 4512026 - | short chain dehydrogenase TERM 3360 4514437 - 4514449 + r 70 -10.5 -3.54424 | opp_overlap 4514417 4514416 GCTCAGTACGTGGAA GCCCC GCA GGGGC TTTCACGAGCTCAGC Rcas_3455 4515894 - 4514608 - | L-rhamnose isomerase Rcas_3456 4516245 - 4515922 - | hypothetical protein TERM 3361 4516299 - 4516342 + r 82 -13 -3.59979 | gap 1, overlap 4516301 4516303 CATGGTCACCCCGCG CAGCGCGCGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGCTGAG TTTACCCTGAGCGAG TERM 3362 4516301 - 4516341 + r 73 -14 -2.75844 | overlap 4516299 4516303 TGGTCACCCCGCGCA GC-GCGCGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGCTGA GTTTACCCTGAGCGA TERM 3363 4516303 - 4516338 + r 100 -21.2 -2.65354 | gap 1, overlap 4516301 4516299 GTCACCCCGCGCAGC GCGCGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGC TGAGTTTACCCTGAG Rcas_3457 4517205 - 4516408 - | DeoR family transcriptional regulator TERM 3364 4516913 - 4516933 + g 74 -4.6 -4.63218 | overlap 4516912 4516918 4516920 TTGATCAGGCGCGCC GCAGCGCG CGCGA TGCGCTCC TTTTCTTCCACGCGC TERM 3365 4517120 - 4517138 + g 74 -14.6 -2.66316 | opp_overlap 4517133, overlap 4517117 ACCGAGATCTGCCCG TGGCGCTG AAG CAGCGCCA TGATCTGGTCGCGCC TERM 3366 4517790 - 4517761 - g 83 -12.7 -3.86897 | opp_overlap 4517774, overlap 4517738 GCGATGGCGCAGAAA CGCGCCGCCTACG CTCG CGCCGGCGTCGCG GAGTATATGGAAATC Rcas_3458 4517344 - 4517967 + | hypothetical protein Rcas_3459 4519029 - 4517971 - | acetyl-lysine deacetylase TERM 3367 4518203 - 4518217 + g 75 -3.4 -4.84359 | overlap 4518201 CCCTTGAGAAACGCG CGCGCC AGC GGGGTG TTTTTCTCCGCCTGG Rcas_3460 4520192 - 4519026 - | acetylornithine and succinylornithine aminotransferase Rcas_3461 4521185 - 4521697 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Rcas_3462 4523061 - 4521823 - | major facilitator transporter Rcas_3463 4523136 - 4523507 + | hypothetical protein Rcas_3464 4524355 - 4523876 - | hypothetical protein Rcas_3465 4525802 - 4524444 - | hypothetical protein TERM 3368 4525351 - 4525341 - G 71 -8.2 -3.88291 | CAGGACGGTCAGAAA GGGC AAG GCCC AAACACGCTGGGCCC Rcas_3466 4526871 - 4526068 - | acetylglutamate kinase TERM 3369 4526368 - 4526314 - G 70 -12.2 -3.23216 | gap 3, overlap 4526318 GGTCAGCAGGATCAA CGT-ATTGGCG-CCGAGC-GCCGCCGC AATT GCCGCAGCCGCTCGGTCGCCATCGACG TTGAGCGCTTCGCCA TERM 3370 4526363 - 4526318 - G 71 -14 -2.57974 | gap 2, overlap 4526314 AGCAGGATCAACGTA TTGGCG-CCGAGC-GCCGCCGC AATT GCCGCAGCCGCTCGGTCGCCAT CGACGTTGAGCGCTT Rcas_3467 4528991 - 4526868 - | pyruvate carboxyltransferase TERM 3371 4527578 - 4527556 - G 72 -2.6 -4.68593 | overlap 4527558 CCCAGGATTGAAAAA TCGGGCAGCA TCA TGATCCCCAA CCGCATGCACAGCAG TERM 3372 4527673 - 4527663 - G 71 -4.6 -4.40003 | overlap 4527657 TTCGAGAAAGACAAA CCGG ATG CCGA CCTGCCGCAGCACCG TERM 3373 4528313 - 4528338 + g 71 -4.7 -4.53034 | gap 1 CCAACAGTTCAAGCG CCTCGTGGTAAC GCG GTTGC-GCGGGG TTTTCGTTATGTAAG Rcas_3468 4530269 - 4529223 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3374 4529798 - 4529770 - G 76 -11 -3.76224 | gap 2 CCCGGATCGATCAAA CCGGCGC-GC-GCC AGT GGCAGCAGCGCCAG GATGGCGGCAGTCGC Rcas_3469 4531123 - 4530266 - | lysine biosynthesis enzyme LysX Rcas_3470 4531294 - 4531127 - | lysine biosynthesis protein LysW Rcas_3471 4532391 - 4531309 - | 3-isopropylmalate dehydrogenase Rcas_3472 4532888 - 4532388 - | 3-isopropylmalate dehydratase small subunit TERM 3375 4532944 - 4532960 + r 73 -9.4 -3.93695 | opp_overlap 4532943 4532946 CATTGCCTCACAGAC GAGCCG CGTGA CGGCTC TTTCTGCCTGCTGCG Rcas_3473 4534231 - 4533113 - | cystathionine gamma-synthase Rcas_3474 4535881 - 4534622 - | 3-isopropylmalate dehydratase large subunit TERM 3376 4535937 - 4535909 - H 100 -13.9 -4.564 | gap 1 AAGCGCAAACGAAAA GCCCGC-TCGCC TGGTCT GGCGAAGCGGGC GCCTGTCAACCAACC TERM 3377 4535975 - 4535991 + H 84 -3.5 -5.16237 | opp_overlap 4535969 4535978 4535980 GACAAGCGAGCCTAA CCAGACC AGA GGGCCGG TTTTTTGCTGCGCTT Rcas_3475 4538012 - 4538569 + | peptide deformylase TERM 3378 4538579 - 4538549 - f 73 -8.8 -3.98378 | TACAGTGAAGAAGAA GCCCCGGCGACCAC CGG GTGAGGGGCGGGGC TGAGACCCGCCCCTA Rcas_3476 4538994 - 4539974 + | signal recognition particle-docking protein FtsY Rcas_3477 4539991 - 4540197 + | hypothetical protein Rcas_3478 4540190 - 4540642 + | hypothetical protein TERM 3379 4541376 - 4541407 + G 81 -11.6 -3.90048 | overlap 4541376 4541379 TCTGCATATGCACCT GAGTCTTGCCGATG CAAC CAGCGGCAAGAATC TCTTTTTCGACGCCC TERM 3380 4541376 - 4541409 + G 74 -5.4 -4.56597 | gap 2, overlap 4541376 4541379 TCTGCATATGCACCT GAG-T-CTTGCCGATG CAAC CAGCGGCAAGAATCTC TTTTTCGACGCCCAC Rcas_3479 4540639 - 4541973 + | glutamine synthetase, type I TERM 3381 4543224 - 4543251 + G 77 -14.2 -2.90714 | overlap 4543215 CCCGTCCGTTTACCG TCGGCATCGAGC AGAC GATCGATGCCGA TGTGTCGGAGTTTCC Rcas_3480 4542200 - 4543627 + | hypothetical protein Rcas_3481 4543632 - 4544042 + | holo-acyl-carrier-protein synthase Rcas_3482 4544036 - 4544425 + | hypothetical protein TERM 3382 4545080 - 4545129 + G 78 -14.9 -3.01791 | gap 1, opp_overlap 4545061 4545054, overlap 4545061 4545062 ATGACGTTTTCACGG CGTCGCTTCCTGGGCGCCGGCGCG ACG CTCGCCGGCG-CCAGGATGTCAGG TGTTCCCACGCAGGT Rcas_3483 4545065 - 4546726 + | hypothetical protein TERM 3383 4546985 - 4547009 + G 72 -7.8 -4.13767 | gap 1, opp_overlap 4546972 ACGCCGGGCTGCGCT TCGGCAACCCG ATCC CGGGA-GCCGA TTTTCGCCTGCACCC Rcas_3484 4546735 - 4548054 + | hypothetical protein Rcas_3485 4548480 - 4548061 - | hypothetical protein Rcas_3486 4549554 - 4548532 - | hypothetical protein Rcas_3487 4550156 - 4549593 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3384 4550120 - 4550101 - G 73 -11.4 -3.57792 | TCAGTCAGGGTGAAA TCGGGCGC AATG GCGCCCAA CGTCAACGTCAGCGA Rcas_3488 4550422 - 4552080 + | zeta-phytoene desaturase Rcas_3489 4552145 - 4555264 + | WD-40 repeat-containing serine/threonin protein kinase Rcas_3490 4556471 - 4555278 - | ErfK/YbiS/YcfS/YnhG family protein Rcas_3491 4557240 - 4556596 - | N-carbamoylsarcosine amidase TERM 3385 4556947 - 4556967 + g 83 -6.7 -4.83169 | overlap 4556949 CGGCGAGTCATGGGT GAGTTGGCG TAG CGCCGGCAC TTTTTGTACGAAGAT TERM 3386 4557452 - 4557473 + r 79 -15.1 -2.92463 | ATTGTTAGGGTAAGG GGGGCGCGG CATG CTGCGCCCC TATCTACGTCGTGCC Rcas_3492 4559458 - 4557521 - | 5-oxoprolinase (ATP-hydrolyzing) Rcas_3493 4561548 - 4559503 - | 5-oxoprolinase (ATP-hydrolyzing) Rcas_3494 4562547 - 4561594 - | pyruvate carboxyltransferase Rcas_3495 4563755 - 4562547 - | Formyl-CoA transferase TERM 3387 4563523 - 4563536 + g 71 -5.3 -4.44667 | overlap 4563521 TCAGGAGTGCGCAGA TCGAT GGTG ATCGA TTTCTTATTACGAGC Rcas_3496 4564474 - 4563761 - | GntR family transcriptional regulator Rcas_3497 4565255 - 4564809 - | hypothetical protein TERM 3388 4564846 - 4564860 + g 71 -12.8 -3.05816 | overlap 4564831 TTGTAGCGCACCGGT CGCGCG TAG CGCGCG TTAAGTGGCGCCTCG Rcas_3498 4565968 - 4565258 - | ABC transporter related TERM 3389 4565559 - 4565523 - G 86 -13.8 -3.83026 | gap 1, opp_overlap 4565516 GGTCGGGACATCAAA GC-GCGGCCAACAGCAA GCAT CTGCTGTTCGCCGCCGC TCAATGTTCCTGCCA Rcas_3499 4567845 - 4565995 - | ABC transporter related Rcas_3500 4568734 - 4567859 - | inner-membrane translocator TERM 3390 4568774 - 4568832 + r 84 -17.5 -2.80935 | gap 2 GCTGCGTGCGTCTTG TGCCGATCGGTGTGGCGCACGGTCTGCGG CCT CTGCCGATGGTGCGCCACACCG--CCGCA TGTGCTGCGTGAACT Rcas_3501 4570192 - 4568846 - | extracellular ligand-binding receptor Rcas_3502 4571000 - 4570236 - | hypothetical protein Rcas_3503 4571490 - 4571050 - | hypothetical protein Rcas_3504 4572914 - 4571490 - | aldehyde dehydrogenase TERM 3391 4571959 - 4571912 - G 70 -11.8 -3.14468 | overlap 4571915 CGCCACCATACTCAA CCAGCGCACCGCCGCACGGCGC AACG GCGCCGTGCGCAAACGCATCGG CAAGATGATCGGCAA Rcas_3505 4574011 - 4572914 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 3392 4572989 - 4572972 - G 74 -5.6 -4.45083 | TGCACACGCAGAAAA TGTTGC CGTTCC GCAACA CCGGTCAACAACGTA TERM 3393 4573042 - 4573019 - G 73 -8.8 -4.07687 | ATTCGGCGGGTAAAA GCCGGCAGTC GCAT AACTGCTGGC ATACAGATCAAACCG Rcas_3506 4574496 - 4574116 - | hypothetical protein TERM 3394 4574277 - 4574254 - G 73 -8.8 -3.97947 | opp_overlap 4574253 4574268 GCGATGGAGCACAAA CGTAGCGCGC AAGC GCACGGTACG GCTTGTTTCACCAAT Rcas_3507 4575256 - 4574576 - | hypothetical protein Rcas_3508 4575357 - 4576097 + | GntR family transcriptional regulator Rcas_3509 4576966 - 4576112 - | hypothetical protein TERM 3395 4576610 - 4576589 - G 91 -3.5 -5.4505 | CGGTCCAACAAAAAA GCGCCCTCC GGTG AGCTGGCGC TCTGGGGTCACGAAC Rcas_3510 4577882 - 4576983 - | hypothetical protein TERM 3396 4577459 - 4577487 + g 75 -13.9 -3.01791 | opp_overlap 4577452 4577451 TAACTAACGCCGGTA TGAGGGGATGGCC AGC GGTCATCCGCTCA TGTTGGCCAACCACT Rcas_3511 4578711 - 4577896 - | hypothetical protein Rcas_3512 4579169 - 4578717 - | hypothetical protein Rcas_3513 4579701 - 4579225 - | hypothetical protein Rcas_3514 4579807 - 4580280 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Rcas_3515 4580299 - 4581192 + | pyruvate carboxyltransferase Rcas_3516 4581228 - 4582460 + | 3-isopropylmalate dehydratase Rcas_3517 4582470 - 4582982 + | 3-isopropylmalate dehydratase, small subunit Rcas_3518 4583032 - 4584234 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 3397 4584613 - 4584627 + G 73 -3.5 -4.74801 | overlap 4584582 4584599 GGACGAGTTGCTGCA CGTCT CTTCT GGACG TTTTTACTGCGATTA TERM 3398 4584709 - 4584733 + G 76 -7.7 -4.31766 | opp_overlap 4584678, overlap 4584676 4584712 TATCGTATGCGCATA CGGCGCGCCGA ATT TCGGCGAGGTG TTTATGTTCTATGGT Rcas_3519 4584266 - 4585732 + | dihydropyrimidinase Rcas_3521 4588343 - 4587198 - | hypothetical protein Rcas_3520 4586180 - 4587322 + | hypothetical protein Rcas_3522 4589629 - 4588472 - | glycosyl transferase group 1 TERM 3399 4588564 - 4588539 - G 76 -13.2 -3.47322 | overlap 4588540 CGCCAGGAGAAGCAA CGCGCGCGCG CAAGCC CGCGGGCGCG CAACTCGGCGCGCAA TERM 3400 4588565 - 4588540 - G 71 -13.9 -2.68072 | overlap 4588539 GCCAGGAGAAGCAAC GCGCGCGCGCA AGCC CGCGGGCGCGC AACTCGGCGCGCAAC TERM 3401 4589048 - 4589027 - G 76 -7.9 -4.3587 | gap 1 GAGGAACAACACAAA CCG-GTCGGG CAA CCCGGCACGG CGACGAAACGCCTCG Rcas_3523 4590382 - 4589651 - | signal peptidase I Rcas_3524 4590532 - 4591524 + | pyruvate-formate lyase-activating enzyme-like protein Rcas_3525 4591595 - 4592014 + | FHA domain-containing protein Rcas_3526 4593499 - 4592015 - | small GTP-binding protein Rcas_3527 4595193 - 4593505 - | metal dependent phosphohydrolase TERM 3402 4593741 - 4593729 - G 71 -9.1 -3.794 | GCGCAATCCAGGAAA TCCGG TCG CCGGA GATGCCGTGTGGATA TERM 3403 4594199 - 4594217 + g 72 -3.8 -4.63486 | AAGGCGACGTCATCA TCGGTG AACGGAC CGCCGA TTTTGTTGAGCGCCT TERM 3404 4594442 - 4594461 + g 74 -4.9 -4.56597 | opp_overlap 4594441, overlap 4594444 ATCCCCTGCCCAAAC GGCACCG TGACGC CGGTGAC TTTTTCGCCGCGCGA Rcas_3528 4596774 - 4595227 - | hypothetical protein Rcas_3529 4598854 - 4597148 - | malate dehydrogenase TERM 3405 4598903 - 4598871 - R 95 -13.4 -4.08394 | opp_overlap 4598879, overlap 4598876 ACAGCCTCCTGAAAA CAGAACGACGGCGC GCGTT GCGCCGTCGCTTCG CACTGACGTTGCTGA TERM 3406 4598898 - 4598876 - R 95 -16.3 -3.95435 | opp_overlap 4598879, overlap 4598871 CTCCTGAAAACAGAA CGACGGCGC GCGTT GCGCCGTCG CTTCGCACTGACGTT Rcas_3530 4600998 - 4598986 - | excinuclease ABC subunit B TERM 3407 4600144 - 4600170 + g 75 -11.6 -3.62572 | overlap 4600141 GTCGTAGTTGGTGCG CTGCTTGAGGCG CGC TGCTTCGAGCAG TTTCCCCTGCTGCTC TERM 3408 4602344 - 4602324 - g 81 -10.4 -4.19238 | opp_overlap 4602324 CGTCGAACGCGAAAA CCATGCGC GCTGG GCGCACGG TCATGTCACTGCCTG TERM 3409 4604610 - 4604569 - g 82 -14.9 -3.32498 | overlap 4604565 GAGCGCACAGAGGAA CGCCCAGCGGCAGGGCGCC CCAC GGCGCGCAGCCACAGCGCG GCGCGCGGCGATCCA Rcas_3531 4601515 - 4604781 + | DNA mismatch repair protein MutS Rcas_3532 4605365 - 4604784 - | isoprenylcysteine carboxyl methyltransferase TERM 3410 4604933 - 4604892 - G 76 -10.9 -3.68222 | gap 1, overlap 4604894 4604895 4604897 TTTGAAGTGGAAGAA GATCAGGAGCGCCGCGCT CAACGCC AGCGCGACGCTGCTG-CC GCGCACCAGCGACCA TERM 3411 4604932 - 4604894 - G 74 -12.4 -3.42069 | overlap 4604892 4604895 4604897 TGAAGTGGAAGAAGA TCAGGAGCGCCGCGCT CAACGCC AGCGCGACGCTGCTGC CGCGCACCAGCGACC TERM 3412 4604931 - 4604895 - G 77 -15.9 -2.64759 | overlap 4604894 4604892 4604897 GAAGTGGAAGAAGAT CAGGAGCGCCGCGCT CAACGCC AGCGCGACGCTGCTG CCGCGCACCAGCGAC TERM 3413 4604929 - 4604897 - G 70 -12.7 -2.85813 | overlap 4604895 4604894 4604892 AGTGGAAGAAGATCA GGAGCGCCGCGCT CAACGCC AGCGCGACGCTGC TGCCGCGCACCAGCG TERM 3414 4606333 - 4606298 - g 76 -9.6 -4.07568 | opp_overlap 4606321 GTGGCGCCGGCAAAA CTCCAGGTCGATGGCA GGGA TGCCGGCGACCTGACG AGCGCCGTCGTGTCG Rcas_3533 4605458 - 4606471 + | glycine cleavage T protein (aminomethyl transferase) Rcas_3535 4609576 - 4607786 - | hypothetical protein Rcas_3536 4611401 - 4609596 - | hypothetical protein Rcas_3537 4612761 - 4611598 - | 2-alkenal reductase Rcas_3538 4614062 - 4612842 - | hypothetical protein TERM 3415 4613253 - 4613238 - G 86 -6.8 -5.07053 | AATCAGCGCAAAAAA TCCGCC TACG AGCGGA ATGAATACCAGGATC TERM 3416 4614015 - 4614005 - G 86 -4.6 -5.19879 | GTTCAAACAGAAAAA CCGC TGC GCAG ACGATCAGCAGCCAC TERM 3417 4614483 - 4614500 + r 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3418 4614601 - 4614618 + r 82 -11.3 -3.96148 | CCGACCATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3419 4614782 - 4614799 + r 82 -11.3 -3.96148 | CCGGCAATGGCGTCG CGCGAGA TGTA TCTCGCG TTTGTGGTGAGGCGC TERM 3420 4614983 - 4615000 + r 82 -11.3 -3.96148 | CCGGCAATGGCGTCG CGCGAGA TGTA TCTCGCG TTTGTGGTGAGGCGC TERM 3421 4615080 - 4615097 + r 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC Rcas_3539 4615781 - 4615176 - | 2'-5' RNA ligase Rcas_3540 4618016 - 4615890 - | polyphosphate kinase Rcas_3541 4618527 - 4619873 + | hypothetical protein TERM 3422 4619896 - 4619922 + T 100 -21 -3.00022 | opp_overlap 4619885 4619880 GACAGGCGCCGACAG GCAGACCAAGGC GAT GCCTTGGTCTGC TCTATATGGGCTACA TERM 3423 4620099 - 4620046 - T 85 -8.7 -4.72272 | gap 1, overlap 4620047 4620092 4620093 CCCGCCCACCAAAAA CGCGGGCATCCCTGGAGGCGCAGGCG TCC CGCCCGC-CCACCAAAAACGCGGGCA TCCCTGGGGCGCAGG TERM 3424 4620098 - 4620047 - T 70 -10 -3.43042 | gap 1, overlap 4620046 4620092 4620093 CCGCCCACCAAAAAC GCGGGCATCCCTGGAGGCGCAGGCG TCC CGCCCGC-CCACCAAAAACGCGGGC ATCCCTGGGGCGCAG TERM 3425 4620144 - 4620092 - T 100 -18.3 -4.72272 | overlap 4620047 4620046 4620093 4620137 4620138 CCCGCCCACCAAAAA CGCGGGCATCCCTGGGGCGCAGGCG TCC CGCCTGCCCACCAGGAACGCGGGCA TCCCTGGGGCGCAGG TERM 3426 4620143 - 4620093 - T 100 -19.6 -3.43042 | overlap 4620047 4620046 4620092 4620137 4620138 CCGCCCACCAAAAAC GCGGGCATCCCTGGGGCGCAGGCG TCC CGCCTGCCCACCAGGAACGCGGGC ATCCCTGGGGCGCAG TERM 3427 4620189 - 4620137 - T 90 -18.3 -3.21099 | opp_overlap 4620159, overlap 4620093 4620092 4620138 4620182 4620183 CCTGCCCACCAGGAA CGCGGGCATCCCTGGGGCGCAGGCG TCC CGCCTGCCCACCAGGAACGCGGGCA TCCCTGGGGGCGCAG TERM 3428 4620188 - 4620138 - T 88 -19.6 -2.52516 | opp_overlap 4620159, overlap 4620093 4620092 4620137 4620182 4620183 CTGCCCACCAGGAAC GCGGGCATCCCTGGGGCGCAGGCG TCC CGCCTGCCCACCAGGAACGCGGGC ATCCCTGGGGGCGCA TERM 3429 4620403 - 4620375 - T 76 -12.4 -3.27475 | gap 1, opp_overlap 4620376, overlap 4620373 4620376 GTCGCCAGCACAACA GGGGCGGCT-GCC GGCT GGCGAGCCGCCCT TCATATAGCCCTCGA TERM 3430 4620402 - 4620376 - T 78 -15.9 -2.56271 | gap 1, opp_overlap 4620376, overlap 4620375 4620373 TCGCCAGCACAACAG GGGCGGCT-GCC GGCT GGCGAGCCGCCC TTCATATAGCCCTCG TERM 3431 4620376 - 4620402 + T 85 -15.9 -3.26471 | gap 1, opp_overlap 4620376 4620375 4620373 TCGCCAGCACAACAG GGGCGGCT-GCC GGCT GGCGAGCCGCCC TTCATATAGCCCTCG Rcas_3542 4621396 - 4620779 - | hypothetical protein TERM 3432 4621441 - 4621430 - R 72 -2.2 -4.84359 | TGATGCTCACAAAAA CACA AAGA TGCG AAGAAAGCCTGTTAT Rcas_3543 4622293 - 4621670 - | hexapaptide repeat-containing transferase Rcas_3544 4622791 - 4622300 - | peptidylprolyl isomerase Rcas_3545 4623344 - 4624612 + | peptidase M16 domain-containing protein Rcas_3546 4624698 - 4626008 + | peptidase M16 domain-containing protein Rcas_3547 4625989 - 4627365 + | hypothetical protein Rcas_3548 4627362 - 4628468 + | hypothetical protein TERM 3433 4630532 - 4630512 - g 74 -12.5 -3.27653 | overlap 4630510 AGCTCGACGAGAATA TCGGCGGGC ATA GCGCGCCGA TCCGAGGTGAAATCC Rcas_3549 4629503 - 4631347 + | ABC transporter related Rcas_3550 4631344 - 4632075 + | protein tyrosine/serine phosphatase TERM 3434 4632974 - 4632941 - g 75 -14 -3.01712 | gap 1, opp_overlap 4632930 4632941 4632943 GGCGCTGCGCGAAGA CG-CATATCGCGCCG TGTTG CAGCGCGATATGTCG TTCTACGACCAGTAC TERM 3435 4632941 - 4632974 + G 74 -12.5 -3.29144 | gap 1, opp_overlap 4632941, overlap 4632930 4632943 GGCGCTGCGCGAAGA CG-CATATCGCGCCGT GTT GCAGCGCGATATGTCG TTCTACGACCAGTAC TERM 3436 4632943 - 4632971 + G 72 -13.9 -2.82623 | opp_overlap 4632941, overlap 4632930 4632941 CGCTGCGCGAAGACG CATATCGCGCCGT GTT GCAGCGCGATATG TCGTTCTACGACCAG TERM 3437 4633930 - 4633946 + G 90 -2.1 -5.46706 | overlap 4633931 GCCGACAGATCGGGC TGGTGCC GCA GTCGCCG TTTTTGTTTTCCGGT Rcas_3551 4632603 - 4634501 + | ABC transporter related Rcas_3552 4635332 - 4634754 - | hypothetical protein Rcas_3553 4635551 - 4635886 + | cupin 2 domain-containing protein TERM 3438 4638813 - 4638799 - T 70 -10 -3.55444 | opp_overlap 4638811 CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCTTCG TERM 3439 4638889 - 4638875 - T 70 -10 -3.55444 | opp_overlap 4638887 CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCTTCG TERM 3440 4639171 - 4639157 - T 70 -10 -3.55444 | opp_overlap 4639169 CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCTTCG TERM 3441 4639247 - 4639233 - T 70 -10 -3.55444 | opp_overlap 4639245 CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCTTCG TERM 3442 4639323 - 4639309 - T 70 -10 -3.55444 | opp_overlap 4639321 CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCTTCG TERM 3443 4639399 - 4639385 - T 70 -10 -3.55444 | CGCGCATGTGCCAAA GTCCTC GCT GAGGAC GTGCAAGCCCCCTGT Rcas_3554 4640383 - 4639589 - | membrane protein-like protein TERM 3444 4640313 - 4640291 - G 77 -2.5 -5.00884 | ACTGCCGGGAAAAAA GCGCCGCAG CGGAC CGGTGACGC AGAGCGCGTACCCTC Rcas_3555 4640740 - 4640399 - | caa(3)-type oxidase, subunit IV Rcas_3556 4641367 - 4640756 - | cytochrome c oxidase subunit III TERM 3445 4641210 - 4641176 - G 93 -14.2 -3.9777 | overlap 4641177 CTCAATATCGAGAAA CTCGCGCGGGTCCTGA AAA TCAGGGCGCGCGCGAT TGACCGGCGCAAACA TERM 3446 4641209 - 4641177 - G 90 -17.7 -2.9818 | overlap 4641176 TCAATATCGAGAAAC TCGCGCGGGTCCTGA AAA TCAGGGCGCGCGCGA TTGACCGGCGCAAAC Rcas_3557 4643565 - 4641640 - | cytochrome c oxidase subunit I type TERM 3447 4642727 - 4642702 - G 74 -9.1 -3.92602 | gap 1 GGAATACGCCACAAA CGCATAA-CCGA AGA TCGGCTTACGCG AGAAGGTTGGCAGCA Rcas_3558 4644699 - 4643587 - | cytochrome c oxidase subunit II TERM 3448 4645161 - 4645132 - H 93 -11.3 -4.30719 | gap 1, opp_overlap 4645148 4645160, overlap 4645133 CCGCCCGACAATAAA CCTGGGGGCGCGGG CGT CCCGCCCGCCC-GG CGGCGCAGGCATTCC Rcas_3559 4646434 - 4648773 + | membrane-bound proton-translocating pyrophosphatase TERM 3449 4648833 - 4648886 + T 71 -7.1 -4.20783 | overlap 4648834 ACGACGTTGGGGGCA GGTAGGGGCAGGTCGTAGGGGGCAG GTCT CAGCCTGCCCCTACCTGCCCCAACA TTTATTACATCCGAT Rcas_3560 4649277 - 4648891 - | hypothetical protein Rcas_3561 4650554 - 4649472 - | transposase IS4 family protein Rcas_3562 4650644 - 4651603 + | GntR family transcriptional regulator Rcas_3563 4651600 - 4653654 + | glycoside hydrolase clan GH-D Rcas_3564 4653848 - 4654798 + | binding-protein-dependent transport systems inner membrane component Rcas_3565 4654798 - 4655673 + | binding-protein-dependent transport systems inner membrane component TERM 3450 4656898 - 4656880 - g 72 -11.7 -3.272 | overlap 4656850 4656866 4656853 ACGACTGGATACCAA TCGCGCG TTCGG CGCGCGA GTCCGAGGAGATGTA Rcas_3566 4655754 - 4657118 + | extracellular solute-binding protein Rcas_3567 4657124 - 4659151 + | glycoside hydrolase clan GH-D TERM 3451 4659327 - 4659317 - f 76 -5.4 -4.59853 | opp_overlap 4659324 4659326, overlap 4659324 TGAACGTTGTAAAAA GCAA GGA TTGC ATTCAATGAATGCCA TERM 3452 4659324 - 4659342 + F 71 -6 -4.41348 | opp_overlap 4659317 4659324, overlap 4659326 TGTAAAAAGCAAGGA TTGCATTC AAT GAATGCCA TTTCTTTCGACCCCC Rcas_3568 4659333 - 4660325 + | hypothetical protein Rcas_3569 4660322 - 4661095 + | short-chain dehydrogenase/reductase SDR Rcas_3570 4661564 - 4663975 + | spermine synthase Rcas_3571 4664115 - 4665113 + | oxidoreductase domain-containing protein Rcas_3572 4665152 - 4666231 + | oxidoreductase domain-containing protein TERM 3453 4666830 - 4666861 + G 73 -10.8 -3.59979 | gap 1, overlap 4666829 4666829 TGATGCCCGACGCAG CGC-GCGCGCGCTTG ATG CAGGCGTTCGCCGCG TTTCGCGTCGAGACC Rcas_3573 4666337 - 4666957 + | hypothetical protein Rcas_3574 4666960 - 4667226 + | putative selenoprotein Rcas_3575 4667746 - 4667195 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 3454 4667500 - 4667481 - G 76 -11.4 -3.81951 | opp_overlap 4667480 4667489 4667491 TTGTAGATCAGGAAA CCGCCGGT TGCG ACCAGCGG CTCGTATTTATCGAG Rcas_3576 4669436 - 4668687 - | thiamine pyrophosphate binding domain-containing protein Rcas_3577 4670536 - 4669433 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 3455 4669736 - 4669751 + g 70 -7.5 -4.07687 | opp_overlap 4669717 CATGCCGCGCGCGCG CGCGG CTTCGA CCGCG TTTTGCGCCACGCGT TERM 3456 4670148 - 4670166 + g 70 -10.2 -3.58343 | opp_overlap 4670142, overlap 4670151 GGACGGAAATCGCCG TGTCCCGC CGA GCGGGTCA TTTGAAAGTAATCCG Rcas_3578 4670848 - 4670576 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Rcas_3579 4672090 - 4670861 - | radical SAM domain-containing protein TERM 3457 4671505 - 4671479 - G 74 -9.5 -3.87869 | gap 2 CGAATCGCCGAGAAA CGCGCGCACTAGC CGG GC-A-TGCGCGCG AAACTCGTCGGGCGA TERM 3458 4672098 - 4672068 - G 93 -9.7 -4.68994 | gap 1, overlap 4672069 4672070 ACCATGACCGAAAAA GTTGGGCGGATGCC CGCA AGCATCCGCCCG-C TCATACCCTTATACC TERM 3459 4672097 - 4672070 - G 71 -13.4 -2.63922 | overlap 4672068 4672069 CATGACCGAAAAAGT TGGGCGGATGCC CGCA AGCATCCGCCCG CTCATACCCTTATAC Rcas_3580 4673420 - 4672107 - | hypothetical protein Rcas_3581 4673602 - 4674639 + | GHMP kinase Rcas_3582 4675347 - 4676264 + | indigoidine synthase A family protein Rcas_3583 4676261 - 4677460 + | radical SAM protein Rcas_3584 4677637 - 4678803 + | aminotransferase class V Rcas_3585 4680633 - 4678816 - | oligoendopeptidase F Rcas_3586 4682821 - 4680656 - | CHAD domain-containing protein TERM 3460 4680946 - 4680926 - G 72 -3.8 -4.58395 | opp_overlap 4680926, overlap 4680928 CGCATCGGCGAAAAA CTCCAGCG TGTAG CGCAGGCG TTTGCCGGCAATGCG TERM 3461 4682973 - 4682944 - H 74 -6.3 -4.57073 | gap 1, overlap 4682946 4682949 TATGGTTTGCAAAAA GTGAAC-GGCAGGC TGC GCCAGCCTGTCCGC GATTGGAGGAAAGGA TERM 3462 4682972 - 4682949 - H 86 -13.2 -3.45031 | gap 1, overlap 4682946 4682944 TTTGCAAAAAGTGAA CGG-CAGGCTG CGC CAGCCTGTCCG CGATTGGAGGAAAGG TERM 3463 4683036 - 4683022 - g 100 -7.8 -5.25656 | opp_overlap 4683021 4683022 AAAAGGACGAAAAAA CGGCGA TCA TCACCG ATTATCAGATTCATA Rcas_3587 4682997 - 4683266 + | ribosomal protein S15 TERM 3464 4683415 - 4683444 + F 100 -15.7 -4.17556 | overlap 4683416 AACCTATAGTCAGTG AGTGAGCCTGGGG TGTA CCCCAGGCTCGCA TTTATTGGAGGTATC TERM 3465 4683416 - 4683443 + F 90 -19.2 -3.10052 | overlap 4683415 ACCTATAGTCAGTGA GTGAGCCTGGGG TGTA CCCCAGGCTCGC ATTTATTGGAGGTAT TERM 3466 4683782 - 4683803 + G 83 -5.1 -5.02074 | gap 1 AAGAAAAAATGTACG CTGC-GGGCA AAA TTCCCGGCAG TTTTTTCAAACGTGA Rcas_3588 4683571 - 4685811 + | polynucleotide phosphorylase/polyadenylase TERM 3467 4685856 - 4685884 + F 93 -11 -4.39166 | CCGGTTGTCGTTCGA TGGAGCGGCACA GCAGA TGCGTCGCTCCA TTTTGCTGTGTGCGC TERM 3468 4686226 - 4686247 + G 76 -7.2 -4.2828 | GCGCTGATTATCGTG GCGTCGGG CGTGCT CTCGGCGC TTTTCCTGAATGACA Rcas_3589 4685914 - 4687128 + | citrate transporter Rcas_3590 4687826 - 4687131 - | abortive infection protein Rcas_3591 4688158 - 4687823 - | hypothetical protein Rcas_3592 4689246 - 4688182 - | GHMP kinase Rcas_3593 4690333 - 4689215 - | DNA methylase N-4/N-6 domain-containing protein TERM 3469 4689697 - 4689717 + gr 72 -12.5 -3.06696 | AACGAACGTCGGATT CGCGCGCCA GCG TCGCGCGCG TCTGTTGCGCCACGG TERM 3470 4690373 - 4690360 - R 73 -4.5 -4.64766 | CTCACAGGGCAAAAA GCAGT TTCA ACCGC AGTATACCACGCTGG TERM 3471 4690399 - 4690448 + r 80 -11 -3.83026 | opp_overlap 4690399, overlap 4690401 4690404 4690407 GCTGGAGGCGTAAAA TGCAAGAGGGTTGCATGATTCT GTGTCA AGAATCATGTCATCTTCTTGTA TTTGCTCTCCACCCG TERM 3472 4690401 - 4690446 + r 74 -11.4 -3.5032 | opp_overlap 4690399, overlap 4690399 4690404 4690407 TGGAGGCGTAAAATG CAAGAGGGTTGCATGATTCT GTGTCA AGAATCATGTCATCTTCTTG TATTTGCTCTCCACC Rcas_3594 4692739 - 4691015 - | thiamine pyrophosphate binding domain-containing protein TERM 3473 4691515 - 4691498 - G 74 -9.1 -3.85698 | opp_overlap 4691497 CGCGGTTGCCACAAA GTCGCCG CCAT CGGCAAC AATTATGCTGTGATC TERM 3474 4692702 - 4692690 - G 71 -5.5 -4.32649 | AGGGTAAAAACGAAA CGCAC CCC ATGCG CCTGAAGCGCCAGTG Rcas_3595 4692875 - 4693195 + | hypothetical protein TERM 3475 4693244 - 4693270 + F 82 -14.5 -3.14234 | gap 1, opp_overlap 4693246, overlap 4693242 4693241 CGGCGGTGCTGATAG GAGGGGGCACGC ACAG GC-TGCCCCCTC TGTGTTGAATTCCTG TERM 3476 4693671 - 4693620 - f 93 -16.4 -3.53012 | gap 1, overlap 4693621 4693661 CCCGCCCGCCCCAAA GCCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGC-GC AGGCGCCCCGCCCGC TERM 3477 4693671 - 4693621 - f 84 -16.6 -2.71712 | overlap 4693620 4693661 CCGCCCGCCCCAAAG CCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGCGC AGGCGCCCCGCCCGC TERM 3478 4693744 - 4693693 - f 93 -16.4 -3.53012 | gap 1, overlap 4693694 4693734 CCCGCCCGCCCCAAA GCCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGC-GC AGGCGCCCCGCCCGC TERM 3479 4693744 - 4693694 - f 84 -16.6 -2.71712 | overlap 4693693 4693734 CCGCCCGCCCCAAAG CCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGCGC AGGCGCCCCGCCCGC TERM 3480 4693817 - 4693766 - f 93 -16.4 -3.53012 | gap 1, overlap 4693767 4693807 CCCGCCCGCCCCAAA GCCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGC-GC AGGCGTCCCGCCCGC TERM 3481 4693817 - 4693767 - f 84 -16.6 -2.71712 | overlap 4693766 4693807 CCGCCCGCCCCAAAG CCGCGAGCGCCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGCGC AGGCGTCCCGCCCGC TERM 3482 4694056 - 4694005 - f 79 -12.8 -3.53012 | gap 1, overlap 4694006 4694046 CCCGCCCGCCCCAAA GCCGCGAGCACCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGC-GC AGGCGCCCCGCCCGC TERM 3483 4694212 - 4694161 - f 79 -12.8 -3.53012 | gap 1, overlap 4694162 4694202 CCCGCCCGCCCCAAA GCCGCGAGCACCGGGAACGCGGGCG TCC CGCCCGCATCACAGCCGCGCGC-GC AGGCGCCCCGCCCGC Rcas_3596 4694701 - 4695537 + | electron transfer flavoprotein alpha/beta-subunit Rcas_3597 4695542 - 4696570 + | electron transfer flavoprotein alpha subunit Rcas_3598 4696548 - 4697864 + | electron-transferring-flavoprotein dehydrogenase Rcas_3599 4697868 - 4698203 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Rcas_3600 4699918 - 4698272 - | histidine kinase Rcas_3601 4701266 - 4699923 - | hypothetical protein Rcas_3602 4702007 - 4701273 - | hypothetical protein Rcas_3603 4702528 - 4702004 - | small GTP-binding protein TERM 3484 4702239 - 4702217 - G 78 -12 -3.74872 | opp_overlap 4702227 ATTGACTGCATGAAA CTCTTCTGCG TAG CGCAGAAGCG CGGTCACCGTTTCTG TERM 3485 4703706 - 4703725 + G 72 -13.6 -2.72379 | GCTTCCGGCAACGCT GGCGATCC TGCT GGATCGCC TGATTGAGGAGTTGC Rcas_3604 4702858 - 4704717 + | putative PAS/PAC sensor protein Rcas_3605 4707181 - 4706393 - | methyltransferase type 11 Rcas_3606 4707773 - 4707159 - | hypothetical protein Rcas_3607 4708546 - 4707872 - | thiamine pyrophosphokinase Rcas_3608 4709420 - 4708554 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 3486 4711960 - 4711946 - R 88 -7 -5.00616 | overlap 4711948 GCTCCCCCCAAAAAA CGGCCG CAC CGTCCG ATTCCGGTCGGACGC Rcas_3609 4715033 - 4712322 - | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits TERM 3487 4713680 - 4713668 - G 84 -2.6 -5.26119 | overlap 4713669 4713670 CGTCCAAAAAGAAAA GCGA CGGAT CCGC CAGCAGTTCAGCGCC TERM 3488 4715264 - 4715299 + r 88 -19.2 -2.70932 | opp_overlap 4715278, overlap 4715272 TCACAGGTCATTGGT ATGAGGGAGACGAAGA GGCG TCTTCGTCTCCCTCAA TGGTTGCAGAAGGAG Rcas_3610 4718617 - 4715366 - | FHA domain-containing protein TERM 3489 4715770 - 4715721 - G 70 -12.2 -3.23393 | gap 1, opp_overlap 4715722, overlap 4715719 4715722 4715749 CGCCACGCCAGAATA CCGGAAGGCATCGCAACCAGCAG AAGAA CTCCTGGTTGC-ATGCCGCCCGT TTCTGGCGGCGGAAC TERM 3490 4715769 - 4715722 - G 76 -15.7 -2.53822 | gap 1, opp_overlap 4715722, overlap 4715721 4715719 4715749 GCCACGCCAGAATAC CGGAAGGCATCGCAACCAGCAG AAGAA CTCCTGGTTGC-ATGCCGCCCG TTTCTGGCGGCGGAA TERM 3491 4715722 - 4715769 + g 86 -13.5 -3.85698 | gap 1, opp_overlap 4715722 4715721 4715719 4715749 GCCACGCCAGAATAC CGGAAGGCATCGCAACCAGCAG AAGAA CTCCTGGTTGC-ATGCCGCCCG TTTCTGGCGGCGGAA TERM 3492 4716176 - 4716229 + g 78 -14.8 -3.0894 | gap 1, overlap 4716214 CGGACCCAGCACCAG CT-GCGCATCGCCTGGATGATGAAC GACAG GTTCATCATCCAGGCGATACAAGAG TTCGATCCCTGGTTC TERM 3493 4718898 - 4718916 + H 100 -13.2 -5.63517 | GGCACCCCATCTTCT GTCTCCTC GAT GAGGAGAC TTTTTTGTTTGGCGA Rcas_3611 4718997 - 4721168 + | Amylo-alpha-16-glucosidase TERM 3494 4722576 - 4722598 + T 74 -11.2 -3.53444 | opp_overlap 4722567, overlap 4722567 CACACACGCCATCGC CCGCCGTTGC ATG GCGGTGGCGG TTTCGGCGGCGGTGC Rcas_3612 4723787 - 4722552 - | extracellular solute-binding protein Rcas_3613 4724476 - 4723859 - | NADP oxidoreductase coenzyme F420-dependent Rcas_3614 4725477 - 4724473 - | ATPase BadF/BadG/BcrA/BcrD type TERM 3495 4724601 - 4724558 - G 74 -14.4 -2.62184 | overlap 4724536 4724535 4724569 4724580 4724581 GGTGTTGGCACACCA GCGGCATCGAACGCCAGCAG AAGG CTGCCGGCGACCGGCGGCGC CTCCAGCCGCACCAC TERM 3496 4724590 - 4724569 - G 75 -13.7 -3.06302 | overlap 4724558 4724580 4724581 ACCAGCGGCATCGAA CGCCAGCAG AAGG CTGCCGGCG ACCGGCGGCGCCTCC Rcas_3615 4726772 - 4725483 - | Alpha-L-fucosidase Rcas_3616 4727763 - 4726807 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Rcas_3617 4728529 - 4727795 - | beta-lactamase domain-containing protein Rcas_3618 4728976 - 4729344 + | ArsR family transcriptional regulator Rcas_3619 4729352 - 4729591 + | redox-active disulfide protein 2 TERM 3497 4729616 - 4729633 + F 100 -12.7 -4.36914 | CGTCTTATCGGGGGA TGGGGCG GCGG CGCCCCA TTTTATGACGCAAGC TERM 3498 4729849 - 4729863 + G 100 -11.4 -5.36441 | opp_overlap 4729845 GAGGGATCACAGGCA GGCGAG GCG CTCGCC TTTTTTCTGTACGAC TERM 3499 4730562 - 4730592 + G 70 -7.4 -3.96624 | opp_overlap 4730566 4730567, overlap 4730567 ACAGGCGCTGATGGC GAAAGGCGCCGCTC TGG GAACGGCGCTTGCC TTTATGATGGCGGTC TERM 3500 4730588 - 4730566 - g 73 -11.2 -3.57144 | opp_overlap 4730562 4730567, overlap 4730567 GCGCTGATGGCGAAA GGCGCCGCTC TGG GAACGGCGCT TGCCTTTATGATGGC TERM 3501 4730587 - 4730567 - g 75 -14.7 -2.74144 | opp_overlap 4730562 4730567, overlap 4730566 CGCTGATGGCGAAAG GCGCCGCTC TGG GAACGGCGC TTGCCTTTATGATGG TERM 3502 4730567 - 4730587 + G 74 -12.5 -3.34455 | opp_overlap 4730567 4730566, overlap 4730562 CGCTGATGGCGAAAG GCGCCGCTC TGG GAACGGCGC TTGCCTTTATGATGG Rcas_3620 4729684 - 4730739 + | permease TERM 3503 4730758 - 4730778 + F 100 -14.7 -4.86731 | opp_overlap 4730760, overlap 4730763 TTGGACAACTGAGAG CAGGGGCGG CGA TCGCCCCTG TTTTGTTTGCGACCG TERM 3504 4730925 - 4730937 + G 76 -9.1 -4.05208 | CGCCTTCATTGCGAC GCCGA CGC TCGGC TTGTTTGGTCTGGAT TERM 3505 4731243 - 4731271 + G 72 -4.4 -4.59853 | gap 1, opp_overlap 4731243, overlap 4731244 TGACGTTCGGGTAAA GGCCGG-CGCGGC CAGT GCGGCGATCGGCG TTTTTGCCGGCTTCC Rcas_3621 4730839 - 4731594 + | hypothetical protein Rcas_3622 4731615 - 4732067 + | hypothetical protein TERM 3506 4732166 - 4732124 - T 88 -13.5 -3.59979 | overlap 4732125 4732128 TTCGCTCAGGGTAAA CGCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GCT GCTCGGGGTGACCAT TERM 3507 4732165 - 4732125 - T 84 -17 -2.75844 | overlap 4732124 4732128 TCGCTCAGGGTAAAC GCAGCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC-GC TGCTCGGGGTGACCA TERM 3508 4732163 - 4732128 - T 85 -18.4 -2.65354 | gap 1, overlap 4732125 4732124 CTCAGGGTAAACGCA GCGAGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_3623 4733651 - 4732992 - | glutaredoxin-like domain-containing protein Rcas_3624 4734506 - 4733721 - | LmbE family protein TERM 3509 4734852 - 4734865 + G 74 -9.5 -3.86897 | TGTATGATGAGCGTG GCGCG CTGG CGCGC TTTGTGCCGGATGCG Rcas_3625 4734734 - 4735168 + | hypothetical protein TERM 3510 4735779 - 4735834 + G 73 -13.1 -3.19668 | gap 1, overlap 4735799 GGCGCATGCGGATGG CGCCGC-AGCCGGTTGCGCCACGCAG CGCCT CGGCGTGGCGCGACCTGCGCGAGGGG TTGAGTTACATCCTG Rcas_3626 4735169 - 4736410 + | major facilitator transporter Rcas_3627 4736908 - 4736489 - | hypothetical protein TERM 3511 4738191 - 4738172 - g 71 -12.8 -3.08679 | GCTGTTGATCGAAGA CGCCGCGC ATGC GCACGGCG CGTCGTGGCGCGGTC Rcas_3628 4737675 - 4738868 + | glutamine--scyllo-inositol transaminase TERM 3512 4739876 - 4739891 + G 84 -8.2 -4.44448 | TCGACCGAATGCGCG CCGGCG ACGC TGCCGG TTTCTTTCGCGTCAT Rcas_3629 4738852 - 4740069 + | hypothetical protein TERM 3513 4740504 - 4740542 + F 70 -13 -2.92157 | overlap 4740506 ATCTCGCATTGGTGG CGCGGCGCGCGGCGCC CGACCAT GGCGTCGCGCGCGATG TATCTCGCATTGGTG Rcas_3630 4740931 - 4741698 + | SH3 type 3 domain-containing protein TERM 3514 4742005 - 4741993 - f 70 -10.5 -3.54424 | opp_overlap 4741986 GCTGAGTTCGTGAAA GCCCC TCC GGGGC TTCCAGGTCTTAGCG TERM 3515 4742069 - 4742057 - f 70 -10.5 -3.54424 | opp_overlap 4742057 GCTGAGTTCGTGAAA GCCCC TGC GGGGC TTCGATGTCCTGCGC TERM 3516 4742196 - 4742184 - f 70 -10.5 -3.54424 | opp_overlap 4742177 4742186 4742190 GCTGAGTTCGTGAAA GCCCC TGC GGGGC TTCCAGGTCTTAGCG TERM 3517 4742260 - 4742248 - f 70 -10.5 -3.54424 | GCTGAGTTCGTGAAA GCCCC GTT GGGGC TTCCAGGTCCTGAGC TERM 3518 4742321 - 4742303 - f 93 -16 -3.50393 | opp_overlap 4742318 CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3519 4742432 - 4742420 - f 70 -10.5 -3.54424 | opp_overlap 4742413 4742429 GCTGAGTTCGTGAAA GCCCC GTT GGGGC TTCCAGGTCTTAGCG TERM 3520 4742496 - 4742484 - f 70 -10.5 -3.54424 | GCTGAGTTCGTGAAA GCCCC TGC GGGGC TTCCAGGTCCTGCGC TERM 3521 4742590 - 4742644 + F 100 -22.2 -3.53224 | opp_overlap 4742590 4742641, overlap 4742582 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3522 4742644 - 4742590 - f 100 -20 -3.53444 | opp_overlap 4742582 4742590, overlap 4742641 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3523 4742684 - 4742666 - f 93 -16 -3.50393 | opp_overlap 4742681 CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3524 4742698 - 4742752 + F 74 -11.2 -3.53224 | opp_overlap 4742749, overlap 4742685 4742681 CGGGTCGGGCTTGAA GCCCGCGCTGAGTTCGTGCAAGCCCC TCC GGGGCTTCCAGGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3525 4742792 - 4742774 - f 93 -16 -3.50393 | CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTAAAGCC TERM 3526 4742838 - 4742826 - f 70 -10.5 -3.54424 | opp_overlap 4742819 GCTGAGTTCGTGAAA GCCCC TGC GGGGC TTCCAGGTCTTAGCG TERM 3527 4742923 - 4742869 - f 100 -20 -3.53444 | opp_overlap 4742861 4742885 4742890, overlap 4742920 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC GTTAGCCCGCAGCTC TERM 3528 4742963 - 4742945 - f 93 -16 -3.50393 | opp_overlap 4742960 CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3529 4743010 - 4742998 - f 70 -10.5 -3.54424 | opp_overlap 4742991 4743000 4743004 GCTGAGTTCGTGAAA GCCCC TGC GGGGC TTCCAGGTCTTAGCG TERM 3530 4743074 - 4743062 - f 70 -10.5 -3.54424 | opp_overlap 4743055 GCTGAGTTCGTGAAA GCCCC GTT GGGGC TTCCAGGTCTTAGCG TERM 3531 4743105 - 4743159 + F 100 -22.2 -3.53224 | opp_overlap 4743105 4743156, overlap 4743097 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3532 4743159 - 4743105 - f 100 -20 -3.53444 | opp_overlap 4743097 4743105, overlap 4743156 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3533 4743199 - 4743181 - f 93 -16 -3.50393 | CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCAGGCTAAAGCC TERM 3534 4743339 - 4743393 + F 100 -22.2 -3.53224 | opp_overlap 4743339 4743390, overlap 4743331 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3535 4743393 - 4743339 - f 100 -20 -3.53444 | opp_overlap 4743331 4743339, overlap 4743390 GCACTGCGGGCTAAA GCCCTTGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3536 4743433 - 4743415 - f 93 -16 -3.50393 | opp_overlap 4743430 CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3537 4743447 - 4743501 + F 86 -13.4 -3.53224 | opp_overlap 4743498, overlap 4743434 4743430 CGGGTCGGGCTTGAA GCCCGCGCTGAGTTCGTGCAAGCCCC TGC GGGGCTTCCATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 3538 4743541 - 4743523 - f 93 -16 -3.50393 | opp_overlap 4743538 CCGCAGCTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3539 4743652 - 4743640 - f 70 -10.5 -3.54424 | GCTGAGTTCGTGAAA GCCCC GTT GGGGC TTCCAGGTCCTGCGC TERM 3540 4743713 - 4743695 - f 93 -16 -3.551 | opp_overlap 4743710 CCGCAACTCAGAGAA CGTGCGGC TCA GCCGCACG GGTCGGGCTTGAAGC TERM 3541 4743727 - 4743781 + F 100 -17 -3.53224 | overlap 4743714 4743710 CGGGTCGGGCTTGAA GCCCGCGCTGAGTTCGTGCAAGCCCC TCC GGGGCTTCCAGGTCCTGAGCGAGGGC TTTAGCCCGCAGCTC TERM 3542 4744884 - 4744929 + G 70 -11.8 -3.19653 | gap 2, opp_overlap 4744878, overlap 4744903 GCGGCAAACCGTGCC CCCCTGC-CGC-GCTGGGCGGG CGAT CTCCCCCGGCTGCGCGCAGAGG TTGATCGCGTTCTCA Rcas_3631 4743953 - 4744933 + | hypothetical protein Rcas_3632 4747824 - 4746358 - | beta-lactamase domain-containing protein Rcas_3633 4749981 - 4748791 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rcas_3634 4750670 - 4750005 - | hypothetical protein TERM 3543 4750070 - 4750047 - G 78 -5.2 -4.75404 | gap 1, overlap 4750036 4750048 AAATGCCAGGAAAAA TCCGAGCGCGC GCT GCACG-TCGGG ATCACCCAGGGCGCG Rcas_3635 4751001 - 4751957 + | LysR family transcriptional regulator TERM 3544 4752055 - 4752111 + T 95 -20 -2.52543 | gap 1, opp_overlap 4752048 GGGACAGACCCGCGC GCCCCTCACCCCCCGCCCGTCAACCCG CGCG CGGGA-GCGGGGCAGGGGGTGAGGGGA TGGCTTCGACCGGCT Rcas_3636 4753241 - 4752273 - | glycosyl transferase family protein TERM 3545 4754269 - 4754322 + r 82 -14.6 -3.21199 | gap 3 TCCGGCATGGTCACC CCGAGCAGC-GCGAGGGGTCTGGCGCG ACC CGCTCC-GATTCCGCGCTGC-GCTCGG TTAGATTCCTCGCTG TERM 3546 4755345 - 4755398 + r 91 -19.8 -3.21199 | gap 3 TCCGGCATGGTCACC CCGAGCAGC-GCGAGGGGTCTGGCGCG ACC CGC-TCAGATTCCTCGCTGC-GCTCGG TTAGATTCCTCGCTG Rcas_3637 4757981 - 4755711 - | glycosyl transferase group 1 Rcas_3638 4759734 - 4758025 - | hypothetical protein TERM 3547 4758495 - 4758522 + g 72 -4 -4.57569 | gap 1, overlap 4758497 ACCATTGATGGCGCG CGAGCGTTGC-CG GAT CGCGCAGCGCCAG TTTTTGCCACAATGC Rcas_3639 4760175 - 4759735 - | hypothetical protein TERM 3548 4760080 - 4760060 - G 72 -4 -4.5366 | gap 1 CCAAAAAAGGGAAAA CCTGCCACT TCGG AG-GACAGG TCGGCAAAAGAGACA Rcas_3640 4762249 - 4760153 - | glycosyl transferase group 1 TERM 3549 4761239 - 4761220 - G 83 -12.2 -4.09685 | opp_overlap 4761222 CCTCATGCCTGAAAA CATCCCTG AATC CAGGGATG TTCGAAACAATGACC TERM 3550 4761575 - 4761559 - G 83 -5.1 -5.08824 | CCTTCATCGAAAAAA TCCGTCC ATA GAACAGA ATAACATGATCCTCA TERM 3551 4761914 - 4761928 + g 81 -6.4 -4.81249 | opp_overlap 4761914 TAGAAAATCATGAAA CTCGAT GAG ATCGGG TTTTTCCCTTTCAGC Rcas_3641 4764522 - 4762246 - | hypothetical protein TERM 3552 4763594 - 4763614 + g 72 -3.9 -4.59773 | GCCAGAATCCACGCT TCCGCTC CCTGGCT GTGCGGA TTTTTGCCAATCAAC Rcas_3642 4765648 - 4764581 - | methyltransferase type 11 Rcas_3643 4766976 - 4765645 - | ABC transporter related Rcas_3644 4769010 - 4767574 - | glycosyl transferase group 1 TERM 3553 4768799 - 4768770 - G 70 -12.1 -3.19653 | opp_overlap 4768764 4768791, overlap 4768761 4768771 TGAGAACTGCATGAA TGCCGCGCGACCT GATC AGGTCGCGCGCGA ACGCCGGTTGCTGTG TERM 3554 4768797 - 4768771 - G 74 -14.5 -2.51471 | gap 1, opp_overlap 4768764 4768791, overlap 4768761 4768770 GAGAACTGCATGAAT GCCGCGCGACCT GATC AGGTCGCGCG-C GAACGCCGGTTGCTG TERM 3555 4769620 - 4769589 - R 72 -13.6 -2.60194 | opp_overlap 4769619, overlap 4769588 AGGCGGCGAAGCAAT CCCCCCGCCGGACA CGCC CGTGCGCCGGGGGG GTCGGTCTACCCTTA Rcas_3645 4770832 - 4769672 - | glycosyl transferase group 1 Rcas_3646 4772360 - 4770837 - | glycosyl transferase family protein TERM 3556 4771778 - 4771752 - G 83 -9.4 -4.28361 | overlap 4771756 GTAACGCCACGAAAA GCGATCATGCTC ATG GAGCACGACGGC TTCGGGCACATAGAC TERM 3557 4772842 - 4772799 - R 70 -12.4 -2.89564 | gap 1 CCTTCAGCCCACAGA GCCAGGAGTCGTGGAAGCCCC GCA GGGGCTTGCACG-CCCTCAGC CAGGGCTTCAGCCCG Rcas_3647 4774560 - 4773406 - | glycosyl transferase group 1 TERM 3558 4773982 - 4773959 - G 91 -21 -2.62983 | overlap 4773943 CCCAGCGTCACAGGA GCGCGCGGCG GCGC CGCCGCGCGC CGCCGATAAAACGGC Rcas_3648 4776773 - 4774557 - | glycosyl transferase family protein TERM 3559 4776732 - 4776692 - G 74 -12.7 -3.34398 | gap 1, overlap 4776690 4776694 CGGCGCGGGCAAACA TATCGGCGGCATTG-GCA ACATAG CGCGCAATGCCGCCGATC ACTGCCGGAGGAAAT TERM 3560 4776730 - 4776694 - G 83 -15.3 -3.24232 | gap 1, overlap 4776692 4776690 GCGCGGGCAAACATA TCGGCGGCATTG-GCA ACATAG CGCGCAATGCCGCCGA TCACTGCCGGAGGAA Rcas_3649 4778912 - 4776810 - | fibronectin type III domain-containing protein TERM 3561 4777000 - 4777018 + g 81 -7.4 -4.43213 | opp_overlap 4777000 GACGGACCTTCAAGA GCGTCG TTCGCGC CGACGC TTTTCGTGTATTCAA TERM 3562 4777094 - 4777058 - G 71 -5.7 -4.25256 | gap 1, overlap 4777059 GGGTGATGAAAAGAA TCG-GCGGGGTGCGCC AGGAAA GGGTCACCCCGCGCGG AATGCGCGAAAACGC Rcas_3650 4780180 - 4779329 - | ABC-2 type transporter TERM 3563 4780426 - 4780478 + H 100 -22.1 -2.90075 | gap 1 CGGCTTGCGCCAGAG CGCCGCCAGGCGATG-GAAGCGGC GTTCGA GCCATTCCCCATCGCCTGGCGGCG TCTCGTTGCAGCAGC TERM 3564 4781310 - 4781279 - g 74 -5 -4.66833 | overlap 4781281 4781306 CGGCAACCGCAAAAA GGCCGTGCTTGCGC TGCA ACGCCAACACGAAC GGATCGCCAATCGGC Rcas_3651 4780587 - 4781729 + | IS605 family transposase OrfB Rcas_3652 4782374 - 4781793 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 3565 4782313 - 4782297 - G 91 -5 -5.26316 | overlap 4782298 CGACTCCAGAAAAAA GCCGCG CTCAT CGCGGA AACAGACCGGTTCGA TERM 3566 4782338 - 4782352 + g 71 -4.9 -4.43844 | overlap 4782332 GTTCGATGATCACGG CGCCG GGCAG TGGCG TTTTGTGAATGGTGA Rcas_3653 4783042 - 4782629 - | hypothetical protein Rcas_3654 4783445 - 4783032 - | hypothetical protein Rcas_3655 4784386 - 4783442 - | hypothetical protein Rcas_3656 4785391 - 4784414 - | NAD-dependent epimerase/dehydratase Rcas_3657 4786214 - 4785657 - | hypothetical protein TERM 3567 4786041 - 4786078 + g 91 -17.1 -3.28712 | gap 1 GGGCGCAGCGCCAGC CGTCGGCGCTA-CACCGA CAG TCGGTGATGGCGTCGGCG TTATCAAGCCAGCAG TERM 3568 4786159 - 4786138 - G 71 -5.8 -4.35483 | GGTGACGACAAGAAA CGCTGAGC GCCCAG GGTCAGCG CAACCGCAGCGAGCG Rcas_3658 4786878 - 4786294 - | response regulator receiver/ANTAR domain-containing protein Rcas_3659 4787064 - 4787882 + | biotin--acetyl-CoA-carboxylase ligase Rcas_3660 4789572 - 4789216 - | hypothetical protein Rcas_3661 4790293 - 4789613 - | two component transcriptional regulator Rcas_3662 4790428 - 4791219 + | hypothetical protein TERM 3569 4791257 - 4791302 + T 93 -15.6 -3.59979 | gap 3, overlap 4791261 4791263 GGCATGGTCACCCCG CGCAGCGCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCG--CTGCG TTTACCCTGAGCGAA TERM 3570 4791261 - 4791301 + T 86 -18.4 -2.75844 | overlap 4791257 4791263 TGGTCACCCCGCGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGCTGC GTTTACCCTGAGCGA TERM 3571 4791263 - 4791298 + T 88 -19.8 -2.65354 | gap 1, overlap 4791261 4791257 GTCACCCCGCGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCTCGC TGCGTTTACCCTGAG Rcas_3663 4792056 - 4791352 - | hypothetical protein Rcas_3664 4793141 - 4792077 - | hypothetical protein TERM 3572 4792132 - 4792174 + g 70 -9.8 -3.53811 | opp_overlap 4792109, overlap 4792126 4792169 ACCGTCGTCTCAGCG TAGCGCCGATCAGTTGCGAT CAG GTCGTGACGGATCTGCGCCA TTTCGACGAGATGCG Rcas_3665 4793365 - 4794456 + | glycosyl transferase group 1 Rcas_3666 4794596 - 4795222 + | lipopolysaccharide biosynthesis protein Rcas_3667 4795224 - 4795913 + | lipopolysaccharide biosynthesis protein Rcas_3668 4795910 - 4796611 + | non-specific protein-tyrosine kinase Rcas_3669 4796836 - 4797219 + | response regulator receiver protein Rcas_3670 4798610 - 4797258 - | hypothetical protein Rcas_3671 4802234 - 4799130 - | multi-sensor hybrid histidine kinase TERM 3573 4802301 - 4802257 - R 70 -13 -2.94695 | gap 1, overlap 4802260 4802268 CCACCATTAAGCATA GC-AGGTCAAGACGCTTGCCA TACT CGGCAAACACCCTGACCTCGC GGACGACGGACTGAT TERM 3574 4802297 - 4802260 - R 73 -13.5 -2.70936 | overlap 4802257 4802268 CCATTAAGCATAGCA GGTCAAGACGCTTGCCA TACT CGGCAAACACCCTGACC TCGCGGACGACGGAC Rcas_3672 4803659 - 4802385 - | cystathionine gamma-lyase Rcas_3673 4804409 - 4803705 - | metallophosphoesterase Rcas_3674 4805714 - 4804692 - | serine/threonine protein kinase TERM 3575 4804805 - 4804778 - G 81 -16.2 -2.70932 | opp_overlap 4804788, overlap 4804759 TGGCGCGCGCAATGA CCCGCGCCAGCG CTGG CGGCGGCGCGGG CACGAGCGCCGCCAG TERM 3576 4804788 - 4804822 + g 75 -13.5 -3.04263 | gap 1, opp_overlap 4804759 4804778 AATGACCCGCGCCAG CGCTGGCGGCGGCGCG GGCA CGAGC-GCCGCCAGAG TCTTCCCGATGGCAT Rcas_3675 4806166 - 4805711 - | hypothetical protein Rcas_3676 4810078 - 4807955 - | hypothetical protein TERM 3577 4810274 - 4810250 - R 91 -5.5 -5.41143 | overlap 4810253 GATTTTCTAAAAAAA GAAGCGCCGCC GGA AGCGGCGCCAG AACCGGCGATCGGGT TERM 3578 4810271 - 4810253 - R 100 -13.8 -4.79949 | overlap 4810250 TTTCTAAAAAAAGAA GCGCCGCC GGA AGCGGCGC CAGAACCGGCGATCG Rcas_3677 4812460 - 4810382 - | MerR family transcriptional regulator TERM 3579 4811191 - 4811173 - G 85 -10.2 -4.38712 | opp_overlap 4811177 CCCAGTGTGACAAAA GCGGCGCC GCC AGCGCCAC CTTGCAGCGTTCGTC TERM 3580 4812014 - 4811995 - G 76 -5.6 -4.56597 | overlap 4811996 GCTGCGCCGCAAAAA TCACCTGG CTTG CCAGGCGC GACAGCAAGAAGCCA TERM 3581 4812556 - 4812512 - H 100 -17.1 -3.61398 | overlap 4812516 CTCCTCGCTCAACAA GGAACCCGTCCTGGCACGGTC GAA GACCACGCCGGGACGGGTTGA CCACAACCCGCGGTA TERM 3582 4812552 - 4812516 - H 100 -22.3 -3.53444 | overlap 4812512 TCGCTCAACAAGGAA CCCGTCCTGGCACGGTC GAA GACCACGCCGGGACGGG TTGACCACAACCCGC TERM 3583 4812646 - 4812657 + H 71 -7.2 -4.18197 | AACGGCCAGGTTCGC CCCG TGAA CGGG TTTTCCCTGGCAGAT Rcas_3678 4813196 - 4814074 + | short-chain dehydrogenase/reductase SDR Rcas_3679 4814678 - 4814028 - | Crp/FNR family transcriptional regulator Rcas_3680 4814919 - 4815446 + | GCN5-related N-acetyltransferase TERM 3584 4815759 - 4815720 - f 76 -14.3 -2.60075 | gap 1, overlap 4815719 CGCTCCCGAATCAAG GCGGTGGAGGCGCAGCGG GTTTG CGGCTGCACC-CCACCAC AAAAGAAGACAAGCA TERM 3585 4815812 - 4815796 - f 81 -5.8 -4.81249 | overlap 4815798 TGCCAAAGGTAAAAA GAGCCA TCACG CGGCTC ATCCGTGAGGCGACC TERM 3586 4816492 - 4816467 - g 84 -16.9 -2.75074 | gap 1, opp_overlap 4816464, overlap 4816464 CCCATCCCAACACCA CG-ACCGGCGGC GGC GCCGCCGGTTCG CCTGGTTATCGACGC Rcas_3681 4816203 - 4816934 + | peptidase C60 sortase A and B TERM 3587 4817073 - 4817053 - f 72 -2.5 -4.82901 | CCCGCGCCACAAAAA GACGAGGAA CTG TTCATGGTC GGGGGAAACGATGCC TERM 3588 4817953 - 4817971 + G 73 -3.1 -4.73388 | gap 1, overlap 4817954 GCCCAAACCCAACGT G-GCGCTG CCGG TAGCGCTC TTTTTGATCACGATT Rcas_3682 4817678 - 4818814 + | peptidase M50 TERM 3589 4821169 - 4821146 - g 78 -14.6 -3.07935 | gap 1, opp_overlap 4821153 ACCGGATCGATCCAA CGGCGCGCGTC CAC GACG-GCGCCG ACATTCGCGGACGAT Rcas_3684 4820380 - 4821753 + | nucleotidyl transferase Rcas_3686 4824131 - 4824355 + | prevent-host-death family protein Rcas_3687 4824352 - 4824738 + | PilT domain-containing protein TERM 3590 4826754 - 4826783 + F 73 -4.4 -4.63218 | opp_overlap 4826754 CCACCAAGAAGAGAT TCGTTTTGAATA TGAAGT TATACAAGACGA TTTTATTAGAGCCGC TERM 3591 4827157 - 4827144 - f 74 -3.1 -4.77165 | CGTTCTACAAGAAAA CGTAA TTCT TCACG CGATAAAAGCACACC TERM 3592 4828966 - 4828908 - g 73 -10.9 -3.61715 | gap 2, opp_overlap 4828898, overlap 4828965 CACGCCGCCTAACAA GCGTTTCCAGCCGACCCGCTCCGCTTCGC TTC GCTCCGCTACGCGGG-CGGCTG-AAACGC AAACCGTTGGGCTGC TERM 3593 4829277 - 4829262 - g 81 -2.4 -5.14563 | CTGGGGAGGAAAAAA GAAGCC GAAC GGCGCC ATACTTACGGATCTC Rcas_3690 4828883 - 4829320 + | hypothetical protein Rcas_3691 4829376 - 4829879 + | hypothetical protein Rcas_3693 4830307 - 4831305 + | DNA methylase N-4/N-6 domain-containing protein Rcas_3694 4831302 - 4832258 + | hypothetical protein TERM 3594 4835620 - 4835639 + F 81 -7.8 -4.62336 | opp_overlap 4835578 GTAGAACTCTGCACT CTCGTCGC CTCT GCGGTGAG TTTTTGCAGTGAAGT Rcas_3699 4835683 - 4836588 + | hypothetical protein TERM 3595 4836585 - 4836632 + T 89 -17.3 -3.14132 | opp_overlap 4836590, overlap 4836590 GCAAGGGGTTCAATA TTGAAGCGCG-CGTAGCACAGGA TTAA TCCTGTGCTACGACGCGGT-CAA TTGCTCAAAGCGCGG TERM 3596 4836590 - 4836628 + T 85 -18.3 -2.56596 | gap 1, opp_overlap 4836590, overlap 4836585 GGGTTCAATATTGAA GCGCG-CGTAGCACAGGA TTAA TCCTGTGCTACGACGCGG TCAATTGCTCAAAGC TERM 3597 4836628 - 4836590 - T 90 -18.3 -3.1855 | gap 1, opp_overlap 4836590 4836585 GGGTTCAATATTGAA GCGCG-CGTAGCACAGGA TTAA TCCTGTGCTACGACGCGG TCAATTGCTCAAAGC Rcas_3700 4837307 - 4836618 - | hypothetical protein Rcas_3701 4840670 - 4837476 - | SARP family transcriptional regulator TERM 3598 4838518 - 4838493 - G 70 -7.5 -4.07885 | gap 1, overlap 4838495 4838496 GAGTTGTCGGCAAAA GACGGCCTGCCG CCC CAGCAGGC-GAC GGAGCAGCGCGGCGG TERM 3599 4840421 - 4840401 - G 72 -2.3 -4.72272 | opp_overlap 4840402 4840403, overlap 4840402 4840403 CGTCGTCAGCAAAAA GGCTTCGCC GAG GGCGCGGCG CAGGTTGTAGAGCGC TERM 3600 4840552 - 4840513 - G 85 -15.6 -3.53012 | opp_overlap 4840508, overlap 4840485 GCCTCGCGTCGGAAA GCGCGCTCCGGCTCCAGC GCCA GCCGGACCAGCAGCGCGC GCGCCTTGTCCGACT TERM 3601 4840689 - 4840664 - G 81 -16.3 -2.78715 | overlap 4840652 AATTCTCGTAGCATA GTAGCACAGGA TTAA TCCTGTGCTAC GGCTACAAACGTATA Rcas_3702 4841318 - 4840692 - | hypothetical protein TERM 3602 4841109 - 4841128 + g 72 -4.4 -4.614 | gap 1 CCATGCATCGTAGCG TCC-AAAGA ATT TCTTTTGGA TTTTGTATCGTTCGC TERM 3603 4842401 - 4842428 + G 73 -8.4 -4.08767 | gap 1, opp_overlap 4842365, overlap 4842402 GCGGCGAACTGCCGC CCGGCGCGGAGGT TGA ACTTCC-CGCCGC TTTTCGGAACATCGC TERM 3604 4845895 - 4845913 + G 70 -8 -4.08692 | overlap 4845896 ATCGCCGGCCTGGGA GCCGGCCC GCA GGGCTGGA TTTTCGGCGCCATTC TERM 3605 4847357 - 4847325 - g 70 -10.4 -3.61715 | opp_overlap 4847354, overlap 4847326 GACGTTCGGCAATAA CCCCGCTCTGGCGC CGGGC GCGCAAGTGCGGGT CGAGAGCGGCGCGCG TERM 3606 4847356 - 4847326 - g 72 -13.9 -2.76815 | opp_overlap 4847354, overlap 4847325 ACGTTCGGCAATAAC CCCGCTCTGGCGC CGGGC GCGCAAGTGCGGG TCGAGAGCGGCGCGC TERM 3607 4848805 - 4848842 + G 91 -19.3 -2.87931 | opp_overlap 4848803, overlap 4848805 ACCTGGGAATACACG CCCTGCGTAGCACAGGA TTCA TCCTGTGCTATGGAGGG TCTCTACCGGCTGGA TERM 3608 4850827 - 4850807 - g 71 -14 -2.57647 | overlap 4850806 AGGTAGTAGAGGAAG GGGCGACC GCAAG GGTCGCCC AACTGGACGCCAACC TERM 3609 4851423 - 4851392 - g 75 -12.2 -3.53811 | gap 1 CGCACTGGCTGGAAA GCGGCGCATCGCTGC TCA GCCGCGA-GCGCAGC GGTCAGGGCGTACAT TERM 3610 4851567 - 4851544 - g 73 -13.1 -3.12668 | TACTTTGACACGCAA GCCGGCGGC ACGACG GCCGCCGAC CAACCCTATCCGCCT TERM 3611 4853505 - 4853487 - g 72 -4.4 -4.56597 | opp_overlap 4853495, overlap 4853488 4853496 GCTCCTGGTGAAAAA CCGCAACG ACG CGCCGCGC TTCATCACCTGGCCG Rcas_3703 4841764 - 4853832 + | dystroglycan-type cadherin domain-containing protein TERM 3612 4853851 - 4853900 + F 88 -19.4 -2.71731 | gap 2, opp_overlap 4853863 GGCGAGGCCGCCCAA CCTGCGGATAGAGCCGACGCCGCC TCTC GGCAGCG-CGGCTC-ATCCGCAAG TCGTTGGGCGGTGGG TERM 3613 4853889 - 4853863 - f 75 -13.7 -2.87881 | gap 1, opp_overlap 4853851 CAACCTGCGGATAGA GCCGACGCCGCC TCTC GGCAGCG-CGGC TCATCCGCAAGTCGT TERM 3614 4854144 - 4854096 - f 83 -15.4 -3.04792 | gap 1, opp_overlap 4854138 TTATTACCGCCAAGA CGCAGAGTACGCAGAGATTCTCC TGAT GGAGAA-CTCTGCACTCTCGGCG CCTCTGCGGTGAGTT TERM 3615 4854138 - 4854157 + F 76 -5.6 -4.62336 | opp_overlap 4854096 GGAGAACTCTGCACT CTCGGCGC CTCT GCGGTGAG TTTTTGCAGTGAAGT TERM 3616 4854449 - 4854439 - g 86 -6.8 -4.99043 | opp_overlap 4854446 TTCTGACAAACAAAA GCTG CTC CAGC ACGTCCTTGACCTAG Rcas_3704 4854278 - 4854784 + | hypothetical protein Rcas_3705 4859127 - 4854775 - | TPR repeat-containing protein TERM 3617 4857409 - 4857385 - G 78 -3.6 -5.04385 | gap 2, opp_overlap 4857389, overlap 4857390 CAGATCGGCAAAAAA GAC-CA-GCGCC TTC GGCGCATATGTC GCCAGCGCATTCGCC TERM 3618 4857454 - 4857484 + g 89 -11.2 -4.25283 | gap 1 GGCGTAGCGCCGCGC CGGTT-CCGGCAG CGCAAC CTGCCGGTAGCCG TTTTCATCGCGCAGT Rcas_3706 4859483 - 4859124 - | hypothetical protein TERM 3619 4860031 - 4859992 - R 100 -17.8 -3.57144 | opp_overlap 4860018, overlap 4859993 4860015 GGGGTGAGGGGCAAA GCGGACAGCGCCAGGGGC ATTA ACCCCTGGCGCTCCCGGC GACCAGTGCTCTGCT TERM 3620 4860029 - 4859993 - R 88 -18.8 -2.74144 | gap 1, opp_overlap 4860018, overlap 4859992 4860015 GGGTGAGGGGCAAAG CGGACAGCGCCAGGGGC ATTA ACCCCTGGCGCT-CCCG GCGACCAGTGCTCTG Rcas_3707 4860564 - 4860112 - | NUDIX hydrolase Rcas_3708 4861136 - 4860582 - | inorganic diphosphatase TERM 3621 4861466 - 4861440 - R 74 -12.3 -3.25823 | overlap 4861444 GTCGCCCGACAGCAA GAAAGGCGGGT TCATC ACCCGCCCTCC GACATGCTGGCTGCT TERM 3622 4861462 - 4861444 - R 93 -11.7 -4.29106 | overlap 4861440 CCCGACAGCAAGAAA GGCGGGT TCATC ACCCGCC CTCCGACATGCTGGC Rcas_3709 4862458 - 4861499 - | hypothetical protein TERM 3623 4862693 - 4862668 - R 72 -11.9 -3.3164 | AATTGATGTGGACAA GTGGCGCAAGA TTCA TCTTGCGCAAC GAACGGACACACACG Rcas_3710 4864074 - 4862737 - | transcription termination factor Rho TERM 3624 4863939 - 4863956 + g 76 -5.5 -4.564 | TCGCTTTCGCCATTT CGCGCAA CTCA TTGAGCG TTTTGCTTTCCAGTT TERM 3625 4864887 - 4864868 - g 71 -13.6 -2.57344 | overlap 4864855 4864867 4864878 TACGCGCGCTACAAC CGCGCAGA AATG TCTGCGCG TCTCCGGCAAACACA TERM 3626 4864920 - 4864904 - g 78 -12.3 -3.81488 | CTCCGGCAAACACAA CGACCTC GAG GAGGTCG GTCCGTCGCCGCGCC TERM 3627 4866223 - 4866250 + G 87 -19.2 -2.62184 | ATACCGGCGTGCTGA TCGGTCCGCGCG GTCG CGCGCGGATCGA TGATGTGCAGCGCCC TERM 3628 4867024 - 4866999 - g 70 -11.9 -3.16564 | gap 1, overlap 4866977 4866975 CGCGCACTCGATGAA CTGCATGCGCGC CAG GCGCGCA-GCAA TCTCGAAGGATTGCT TERM 3629 4867285 - 4867257 - g 73 -10.9 -3.55622 | overlap 4867258 GGCAATCTGGTGAAA GCGCTGGCGCCAA TCG TCGGCGGCAGCGG CGGCGGACGCCCCGA TERM 3630 4867284 - 4867258 - g 75 -14.4 -2.73159 | overlap 4867257 GCAATCTGGTGAAAG CGCTGGCGCCAA TCG TCGGCGGCAGCG GCGGCGGACGCCCCG Rcas_3711 4864674 - 4867391 + | alanyl-tRNA synthetase Rcas_3712 4867409 - 4869403 + | hypothetical protein Rcas_3713 4869432 - 4869872 + | Holliday junction resolvase YqgF Rcas_3714 4870410 - 4869826 - | hypothetical protein TERM 3631 4870579 - 4870590 + r 76 -7.2 -4.4715 | opp_overlap 4870570 4870572 CAATCACACGAGTTA CGCG ATGG CGCG TTTTCTGGCTTCGCC TERM 3632 4870674 - 4870640 - R 100 -14.3 -4.25104 | gap 1 CGCTCCTGATCAAAA TG-GTGCGGCGCGGCG GCTT CGCCGCACCGTACACA AAAGAAGACAAGTAC TERM 3633 4870726 - 4870710 - R 100 -9.4 -4.74103 | TGCCGAAGGCAAAAA GAGCCG TCCTG CGGCTC GTCCGTGAGGTGACC TERM 3634 4870846 - 4870829 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3635 4870888 - 4870871 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3636 4870930 - 4870913 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3637 4870972 - 4870955 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3638 4871154 - 4871137 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3639 4871210 - 4871193 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCTCGCGCCT TERM 3640 4871273 - 4871256 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CTACGCCTCGCGCCT TERM 3641 4871315 - 4871298 - R 82 -11.3 -3.96148 | overlap 4871310 GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCGCGCGCCT TERM 3642 4871357 - 4871340 - R 82 -11.3 -3.96148 | overlap 4871352 GCGCCTCACTACAAA CGCGAGA TAAA TCTCGCG CGACGCCGCGCGCCT TERM 3643 4871420 - 4871403 - R 82 -11.3 -3.96148 | overlap 4871415 GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCGCGCGCCT TERM 3644 4871554 - 4871537 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CGACGCCTCGCGCCT TERM 3645 4871701 - 4871684 - R 82 -11.3 -3.96148 | overlap 4871696 GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCGCGCGCCT TERM 3646 4871835 - 4871818 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CGACGCCTCGCGCCT Rcas_3715 4872737 - 4871871 - | NADP oxidoreductase coenzyme F420-dependent TERM 3647 4873233 - 4873216 - R 82 -11.3 -3.85698 | TCGCCTCGCCACAAA CGCGAGA TAAA TCTCGCG CTACGCCATTGCCGG TERM 3648 4873407 - 4873390 - R 82 -11.3 -3.9712 | TCACCTCACCACAAA CGCGAGA TAAA TCTCGCG CTACGCCATTGCCGG TERM 3649 4873483 - 4873466 - R 82 -11.3 -3.9712 | opp_overlap 4873480 TCACCTCACCACAAA CGCGAGA TAAA TCTCGCG CTACGCCTTTGCCGG TERM 3650 4874236 - 4874219 - R 82 -11.3 -3.9712 | opp_overlap 4874233 TCACCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCTTTGCCGG TERM 3651 4874738 - 4874721 - R 82 -11.3 -3.96148 | TCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CTACGCCATTGCCGG TERM 3652 4874912 - 4874895 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCATTGCCGG TERM 3653 4874972 - 4874955 - R 82 -11.3 -3.96148 | GCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CGACGCCATTGCCGG Rcas_3716 4876097 - 4875108 - | peptidase S58 DmpA Rcas_3717 4876906 - 4876100 - | DSBA oxidoreductase Rcas_3718 4877417 - 4876908 - | hypothetical protein Rcas_3719 4877835 - 4877488 - | hypothetical protein Rcas_3720 4878534 - 4877845 - | dTMP kinase TERM 3654 4878081 - 4878099 + g 100 -12.4 -4.42238 | opp_overlap 4878077 GACCCATCAGACGCG CGCCGGGA TGC TTCCGGCG TTTTCGTTCCAGTCC Rcas_3721 4880177 - 4878561 - | single-stranded nucleic acid binding R3H domain-containing protein Rcas_3722 4881168 - 4880098 - | hypothetical protein TERM 3655 4880263 - 4880279 + gr 76 -10.1 -3.76232 | overlap 4880264 CGGTGCGAGGATTGA TCGTCGC GCG GCGACGG TTGTGTGTTTACAGA Rcas_3723 4881765 - 4881196 - | SNO glutamine amidotransferase Rcas_3724 4882696 - 4881815 - | pyridoxine biosynthesis protein TERM 3656 4882849 - 4882816 - R 89 -16.1 -3.28497 | overlap 4882811 GGACCGGAAAGGCAA GAGGTCAGGAGCG ATGTCCGG CGCCCCTGACCTC CCGTTGCCGACAATC Rcas_3725 4883487 - 4882882 - | superoxide dismutase TERM 3657 4883188 - 4883155 - G 70 -10.3 -3.57561 | gap 1, opp_overlap 4883157 4883164 CTTGAACTCGGCAAA GCTGCCGAAGGCG-TC GTT GATCGCCTTTGCCAGC TCGCCGCGCGGCTCG Rcas_3726 4884169 - 4883531 - | putative transcriptional regulator TERM 3658 4883593 - 4883556 - G 73 -10.8 -3.57144 | gap 2, opp_overlap 4883568 4883582 TCTGCGATGCGGAAA CGACAGCAACGACCATCG GCGG CGATGGT--TTGCTGCCG CTCGACCGGCGCGCG TERM 3659 4883568 - 4883583 + g 71 -9 -3.73775 | opp_overlap 4883556, overlap 4883582 AAACGACAGCAACGA CCATCG GCGG CGATGG TTTGCTGCCGCTCGA Rcas_3727 4884326 - 4885102 + | short-chain dehydrogenase/reductase SDR TERM 3660 4886159 - 4886191 + G 71 -8.4 -3.86346 | gap 2, overlap 4886144 4886183 CAGGTCGCCGTCATA CCCGGCGACACGTTCG GTC CGAGCG-G-CGCGGGG TTTGTGCGCGCCTGC Rcas_3728 4885115 - 4886278 + | aminotransferase class I and II Rcas_3729 4886301 - 4886651 + | hypothetical protein TERM 3661 4887289 - 4887301 + G 74 -6.2 -4.41206 | opp_overlap 4887289 AGGTAAAAAAATGAA GCCC AGCCA GGGC TTTTATGCGATCCTT Rcas_3730 4886663 - 4887346 + | glycosyl transferase family protein TERM 3662 4887390 - 4887407 + T 82 -11.3 -3.9712 | CCGGCAATAGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGTGA TERM 3663 4887466 - 4887483 + T 82 -11.3 -3.85698 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGCGAGGCGA TERM 3664 4887919 - 4887936 + T 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3665 4888182 - 4888199 + T 82 -11.3 -3.96148 | CCGGCAACGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3666 4888293 - 4888310 + T 82 -11.3 -3.85698 | CCGGCAACGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGCGAGGCGA TERM 3667 4888374 - 4888391 + T 82 -11.3 -3.85698 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGCGAGGCGC TERM 3668 4888467 - 4888484 + T 82 -11.3 -3.96148 | CTGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3669 4888580 - 4888597 + T 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC TERM 3670 4888649 - 4888666 + T 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGC Rcas_3731 4889429 - 4888956 - | 3-dehydroquinate dehydratase, type II Rcas_3732 4894894 - 4889426 - | parallel beta-helix repeat-containing protein TERM 3671 4891296 - 4891316 + g 73 -8.2 -4.07885 | opp_overlap 4891293 4891296 GCCAACGAGAACGGA CCGGACGG CGTCA CCGTCAGG TTTTCCAGACCGCTG TERM 3672 4892860 - 4892889 + g 71 -13 -3.09671 | overlap 4892862 CGCCGGATGCGCCGC CATTGTTGCGCG CCAGGT TGCGCAACAATG TGTTGCCGTTCGAAT Rcas_3733 4899229 - 4894910 - | hypothetical protein TERM 3673 4898996 - 4899011 + g 70 -11.8 -3.16683 | opp_overlap 4898988 4898985 AATAGTACCGCCGCC GGCGGC GTTC GCCGCC TTGATCGCCTGACGT TERM 3674 4899420 - 4899445 + H 89 -10.4 -4.58395 | overlap 4899444 AACAGCAGTGACAGG CGCAGCGGGC GCAGCA GTCCGCTGTG TTTTTGCACACTGCA Rcas_3734 4899496 - 4901364 + | chaperone protein DnaK Rcas_3735 4901919 - 4902476 + | colicin V production protein Rcas_3736 4903868 - 4902666 - | hypothetical protein TERM 3675 4904460 - 4904477 + H 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGA TERM 3676 4904621 - 4904638 + H 82 -11.3 -3.96148 | CCGGCAATGGCGTAG CGCGAGA TTTA TCTCGCG TTTGTGGTGAGGCGA TERM 3677 4905151 - 4905170 + G 84 -2 -5.36441 | overlap 4905151 4905153 GGTGCTCCTCGACTA TGGTGACG TTGT CGTCCACA TTTTTTCTGTCGAAC Rcas_3737 4904936 - 4905250 + | iojap-like protein TERM 3678 4905299 - 4905332 + G 81 -13.1 -3.80733 | gap 1 CACTACGTCATTTTC GGTC-TCGGCGCTGCC GTC GGTAGCGCCGTTGGCC TTGTTCTGGGATCGA Rcas_3738 4905263 - 4905451 + | hypothetical protein TERM 3679 4905493 - 4905454 - T 85 -9.3 -4.63218 | opp_overlap 4905457 4905460, overlap 4905457 4905460 4905461 GCTGTTGCAATAAAA CATCAAG-CCCAGGAGGGC GTAT GCCC-CCTGGGACTGGTTG AATACGCTACGCGCC TERM 3680 4905486 - 4905460 - T 73 -10.1 -3.61106 | gap 1, opp_overlap 4905457 4905460, overlap 4905457 4905454 4905461 GCAATAAAACATCAA GCCCAGGAGGGC GTAT GCCC-CCTGGGA CTGGTTGAATACGCT TERM 3681 4905485 - 4905461 - T 73 -13.6 -2.75579 | gap 1, opp_overlap 4905460 4905457, overlap 4905460 4905457 4905454 CAATAAAACATCAAG CCCAGGAGGGC GTAT GCCC-CCTGGG ACTGGTTGAATACGC Rcas_3739 4906381 - 4905509 - | succinyl-CoA synthetase, alpha subunit Rcas_3740 4907180 - 4906458 - | alanine racemase domain-containing protein TERM 3682 4907386 - 4907374 - g 73 -6.9 -4.25104 | GCGGGCGGATCAAAA CCGAC TCA GCCGG CACCGGCGCCTGGAA Rcas_3741 4907244 - 4907732 + | protein tyrosine phosphatase Rcas_3742 4907767 - 4908840 + | hypothetical protein Rcas_3743 4910325 - 4908844 - | chlorophyllide reductase subunit Z TERM 3683 4909302 - 4909288 - G 71 -8.5 -3.83042 | overlap 4909284 CGAGCCAAAAACGAA CGCCG GAGCA CGGCG GTGCAGCATCTGGCG TERM 3684 4909500 - 4909515 + g 72 -3.9 -4.56775 | overlap 4909492 ATAGATCCCACACGG CGCGC AATGTG GTGCG TTTTTCGCCGGCAAT Rcas_3744 4911600 - 4910332 - | chlorophyllide reductase subunit Y TERM 3685 4911731 - 4911703 - R 82 -12.6 -3.70068 | gap 1, opp_overlap 4911708 4911711, overlap 4911708 TACTACAATCTCAAA GGAAAGATTGCGC TTAT GCGCA-TCTTTCC ACAAGAACCAGAGAA TERM 3686 4911984 - 4911967 - R 82 -11.3 -3.96148 | TCGCCTCACCACAAA CGCGAGA TACA TCTCGCG CTACGCCATTGCCGG TERM 3687 4912129 - 4912112 - R 82 -11.3 -3.96148 | TCGCCTCACCACAAA CGCGAGA TAAA TCTCGCG CTACGCCATTGCCGG Rcas_3745 4913434 - 4912703 - | hypothetical protein TERM 3688 4912759 - 4912778 + g 84 -10.8 -4.1899 | TCAACCGTCGCATCT CTTCAGGA TCGA TCCTGAAG TTTTCGATCAACTCG Rcas_3746 4915899 - 4914721 - | chlorophyllide reductase iron protein subunit X Rcas_3747 4917337 - 4916366 - | alcohol dehydrogenase Rcas_3748 4917832 - 4917350 - | 2-vinyl bacteriochlorophyllide hydratase TERM 3689 4918707 - 4918690 - g 74 -9.1 -3.87354 | opp_overlap 4918706 GAAATGGATATGAAA GCACGCA TGGC TGCGCGC TCACCGCGTGAACTG Rcas_3749 4918126 - 4918971 + | UspA domain-containing protein Rcas_3750 4919719 - 4918952 - | hypothetical protein Rcas_3751 4920970 - 4919750 - | geranylgeranyl reductase TERM 3690 4921249 - 4921232 - R 78 -9.9 -3.85698 | TCGCCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG TERM 3691 4921325 - 4921308 - R 78 -9.9 -3.85698 | TCGTCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG TERM 3692 4921401 - 4921384 - R 78 -9.9 -3.85698 | TCGCCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG TERM 3693 4921477 - 4921460 - R 78 -9.9 -3.85698 | TCGTCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG TERM 3694 4921850 - 4921833 - R 78 -9.9 -3.85698 | TCGTCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG TERM 3695 4922204 - 4922187 - R 78 -9.9 -3.85698 | TCGTCTCTCCACAAA TGCGAGA TAAA TCTCGCA CTACGCCATTGCCGG Rcas_3752 4923311 - 4922397 - | bacteriochlorophyll/chlorophyll a synthase TERM 3696 4923429 - 4923391 - R 84 -11.2 -4.09963 | CTCTAAGAACAAGAA TGCTGTGTGATGCG TTGTTCGATTC CACATCACACAGCA CGCATCACACCCCCG Rcas_3753 4924418 - 4923456 - | hypothetical protein Rcas_3754 4926443 - 4924518 - | photosynthetic reaction center subunit M TERM 3697 4926063 - 4926039 - G 82 -10.7 -3.99898 | overlap 4926032 CAACCAACCGACAAA GGCGATGGTCG CTG CAACCATCGTC AGGAACCAGAAGAAG TERM 3698 4926583 - 4926543 - R 74 -12.6 -3.24708 | gap 1, opp_overlap 4926539 4926538 4926536, overlap 4926541 4926539 TACGGCGTAAAGACA GGACAG-GGGCTGATGCGC TGCC ACGTGTCAGCCCGCTGTCC TCACCTCTTTACGAG Rcas_3756 4927002 - 4926835 - | antenna complex alpha/beta subunit TERM 3699 4928476 - 4928492 + G 83 -5 -5.055 | overlap 4928478 TCGACCCGGAACGAT GGGCGC GACAG GCGCAC TTTTTTCGCCATTGA Rcas_3757 4927506 - 4928507 + | MerR family transcriptional regulator Rcas_3758 4928574 - 4929038 + | hypothetical protein Rcas_3759 4930017 - 4929082 - | transglutaminase domain-containing protein Rcas_3760 4932146 - 4931187 - | hypothetical protein Rcas_3761 4933569 - 4932139 - | hypothetical protein Rcas_3762 4934094 - 4935113 + | histidine kinase Rcas_3763 4935110 - 4935775 + | two component LuxR family transcriptional regulator Rcas_3764 4935775 - 4936605 + | hypothetical protein TERM 3700 4937925 - 4937975 + G 88 -16.1 -3.35679 | gap 2, opp_overlap 4937916, overlap 4937926 4937928 TCGAAACGCCGCTTG CGACGGTTGCGGCGGCGGCGCGCGC CGG GCGCGCG-CG-CGGCGCGACGGTCA TTCTCGATCCGGCGC TERM 3701 4937926 - 4937974 + G 90 -19.6 -2.61264 | gap 2, opp_overlap 4937916, overlap 4937925 4937928 CGAAACGCCGCTTGC GACGGTTGCGGCGGCGGCGCGCGC CGG GCGCGCG-CG-CGGCGCGACGGTC ATTCTCGATCCGGCG TERM 3702 4937928 - 4937972 + G 83 -16.4 -2.8474 | gap 2, opp_overlap 4937916, overlap 4937926 4937925 AAACGCCGCTTGCGA CGGTTGCGGCGGCGGCGCGCGC CGG GCGCGCG-CG-CGGCGCGACGG TCATTCTCGATCCGG Rcas_3765 4937501 - 4938415 + | ribokinase Rcas_3766 4938419 - 4939108 + | HAD family hydrolase TERM 3703 4939467 - 4939484 + G 72 -2.7 -4.70613 | gap 1, overlap 4939468 4939470 ATGGCTCGATCAGGT TGC-GCAA GGA TTGCTGCG TTTTCTTCCCCTTTT Rcas_3767 4939312 - 4939686 + | LrgA family protein Rcas_3768 4939667 - 4940389 + | LrgB family protein TERM 3704 4940535 - 4940495 - f 70 -10.4 -3.55444 | opp_overlap 4940495 4940518 GTGGGAGCGGGGAAA CCGGCGCCGCGCGC-GAG TCCGTCC CCCGGCGGGCGG-GCCGG TGTTTGCGGTCATTG Rcas_3769 4941135 - 4942457 + | hypothetical protein Rcas_3770 4943746 - 4942487 - | sterol 3-beta-glucosyltransferase TERM 3705 4942934 - 4942885 - G 88 -14.9 -3.71686 | gap 1 CTGAACCGAAGAGAA TGCCGCGGCGCT-GCGCCAGGCGC AGC GCTTCCAGCGCCAGCGCCGCATCA TCGCGCGGTCGCCGA Rcas_3771 4944043 - 4943756 - | hypothetical protein TERM 3706 4944240 - 4944213 - g 80 -14.8 -3.16881 | opp_overlap 4944235, overlap 4944195 CACGCACCCGATGAA CACCGGGTGGCG CTCA CGCCAGCCGGCG TGCACTCGCTGGTCA TERM 3707 4944433 - 4944451 + G 77 -2.3 -5.03314 | TGCCGATGGTGCGTC CCGGTCA GGTTG TAGCCGG TTTTTTGCACCTGGC Rcas_3772 4944174 - 4945265 + | NAD(P) transhydrogenase subunit alpha TERM 3708 4945792 - 4945821 + G 78 -9.9 -4.09511 | gap 1, opp_overlap 4945768 4945791 4945789 4945793, overlap 4945793 TATCGGGCACAACAC ACGGCGCG-CCGTC AAC GAGGGGCGCGCCGA TTTTACGCCGATCTT TERM 3709 4945793 - 4945820 + G 75 -13.4 -3.05224 | gap 1, opp_overlap 4945768 4945793 4945791 4945789, overlap 4945792 ATCGGGCACAACACA CGGCGCG-CCGTC AAC GAGGGGCGCGCCG ATTTTACGCCGATCT TERM 3710 4945820 - 4945793 - g 76 -13.4 -3.17325 | gap 1, opp_overlap 4945792 4945793, overlap 4945768 4945791 4945789 ATCGGGCACAACACA CGGCGCG-CCGTC AAC GAGGGGCGCGCCG ATTTTACGCCGATCT Rcas_3773 4945535 - 4946830 + | acetyl-CoA hydrolase/transferase Rcas_3774 4947787 - 4946834 - | UspA domain-containing protein Rcas_3775 4948015 - 4948431 + | UspA domain-containing protein Rcas_3776 4948480 - 4949373 + | UspA domain-containing protein TERM 3711 4949481 - 4949439 - T 93 -16.3 -3.59979 | TTCGCTCAGGGTAAA CGCAGCGTGGAATC-GGCGCG GGT CGCGCCCGACCCCTCGC-GCG GCTCGGGGTGACCAT Rcas_3777 4950301 - 4949600 - | phosphoribosyltransferase-like protein Rcas_3778 4950996 - 4950319 - | CBS domain-containing protein TERM 3712 4950966 - 4950988 + g 78 -4.8 -4.81083 | CAATTGCAGGAGTGC TCATCCAGTC CGC GACTCGTTGA TTTTTCATAGTTGCC Rcas_3779 4951452 - 4951940 + | CBS domain-containing protein TERM 3713 4952015 - 4951962 - T 77 -3.3 -4.91285 | gap 5, opp_overlap 4951969, overlap 4951965 4951966 4951967 ATCAATACAACAAAA CAATGGGTCGCTATGGTGGCGCCGTGGC AAT GCGACGGCGCCACC---GCGATC-AT-G ATAATGTCTATGCCT TERM 3714 4952013 - 4951965 - T 74 -6.1 -4.53142 | gap 4, opp_overlap 4951969, overlap 4951962 4951966 4951967 AATACAACAAAACAA TGGGTCGCTATGGTGGCGCCGTGGC AAT GCGACGGCGCCACC---GCGATC-A TGATAATGTCTATGC TERM 3715 4952078 - 4952123 + T 82 -11.2 -3.96148 | gap 3 GGCATGGTCACCCCG CGCAGCGCGAGGGGTCATGCGCG ACC CGCGCC-GATTCC--GCGCTGCG TTTATCCTGAGCGAA Rcas_3780 4953060 - 4952173 - | ribonucleotide-diphosphate reductase subunit beta Rcas_3781 4954052 - 4953057 - | LysR family transcriptional regulator Rcas_3782 4955191 - 4954067 - | calcium/cation antiporter TERM 3716 4954508 - 4954493 - G 83 -7.6 -4.58685 | AAATTCGCTCAAAAA GACGAT AGCA ATCGTC GAGACCGTCAGCACA Rcas_3783 4955344 - 4955772 + | CoA-binding domain-containing protein TERM 3717 4956080 - 4956098 + GT 91 -8.1 -4.75288 | gap 1 ATGCGTCGTTATGGG CGCGACCC GCAA GGG-CGCG TTTATTTTAGTCTGA Rcas_3785 4957693 - 4956938 - | WecB/TagA/CpsF family glycosyl transferase Rcas_3784 4955816 - 4956994 + | N-acylglucosamine 2-epimerase TERM 3718 4957550 - 4957539 - Gf 76 -7.2 -4.2717 | opp_overlap 4957539, overlap 4957540 AGCACGCGACGAAAA GCGC GATT GCGC CGCGCTTCCATAATA TERM 3719 4957922 - 4957956 + G 88 -7.2 -4.8622 | overlap 4957925 TCCCTTGATCTTCAT CGACCTGCGTGA TCGGTATGGTC TCACGCAGGTGG TTTTTGATTCGGCGG Rcas_3786 4957812 - 4959581 + | aspartyl-tRNA synthetase Rcas_3787 4959594 - 4960169 + | ATP--cobalamin adenosyltransferase Rcas_3788 4960383 - 4961033 + | hypothetical protein TERM 3720 4961730 - 4961700 - f 100 -17.7 -3.53012 | gap 1 GCGCCTGTTGGTAAA CT-CCCCTCTCCCG CGCG CGGGAGAGGGGCAG GGGGTGAGGGTACAA TERM 3721 4961982 - 4962015 + G 71 -13.7 -2.57564 | overlap 4961981 ACGGTTTCTCACCTG CCGCCGCCTCCCGGC GGAC GCTGGACGGTGGCGG ATTATGAGCGCCTGC Rcas_3789 4961937 - 4962530 + | hypothetical protein TERM 3722 4962641 - 4962596 - f 73 -9.8 -3.59979 | gap 3 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGAGCG GGT CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC TERM 3723 4962772 - 4962805 + G 71 -13.7 -2.57564 | overlap 4962771 ACGGTTTCTCACCTG CCGCCGCCTCCCGGC GGAC GCTGGACGGTGGCGG ATTATGAGCGCCTGC Rcas_3790 4962727 - 4963320 + | hypothetical protein Rcas_3791 4964418 - 4963330 - | Rieske (2Fe-2S) domain-containing protein Rcas_3792 4965705 - 4964557 - | hypothetical protein Rcas_3793 4966145 - 4965702 - | hypothetical protein Rcas_3794 4966600 - 4966145 - | hypothetical protein TERM 3724 4966991 - 4967018 + r 71 -7.6 -4.09685 | opp_overlap 4966961 4966970 AGGGCAGCCACAGCC CCGCGCCTCTGG GAAT CTGGAGGAGTGG TTTTGCCGCGTAGAA Rcas_3795 4968096 - 4967038 - | hydrogenase expression/formation protein HypE Rcas_3796 4969208 - 4968093 - | hydrogenase expression/formation protein HypD TERM 3725 4968202 - 4968147 - G 71 -13.8 -2.64616 | opp_overlap 4968147 4968194 TCCGTACTGATAGTA CGCAGCGCATGCCCCTTCGCTCGACA CCAT CGTTGCGCCAAGGGGCGTGCGCGGGG TGCATTCCTTGCCGA TERM 3726 4968147 - 4968202 + g 83 -17.5 -2.60244 | opp_overlap 4968147, overlap 4968194 TCCGTACTGATAGTA CGCAGCGCATGCCCCTTCGCTCGAC ACCATC GTTGCGCCAAGGGGCGTGCGCGGGG TGCATTCCTTGCCGA Rcas_3797 4969474 - 4969205 - | hydrogenase assembly chaperone hypC/hupF Rcas_3798 4970647 - 4969544 - | NHL repeat-containing protein TERM 3727 4970038 - 4970016 - G 70 -9.8 -3.54408 | opp_overlap 4970015 4970016, overlap 4970012 GGCCAGCGAAACGAA CATGGCGACG GCC CTTCGCCACG ATTTTCGGCATGGCT Rcas_3799 4971533 - 4970658 - | NifU domain-containing protein TERM 3728 4971576 - 4971595 + r 71 -9.2 -3.81879 | GGTTCTTCCATCGTT GCGCCGGA CATC TCCAGCGC TTCTTCGGTTTTGGC Rcas_3800 4972027 - 4971557 - | hypothetical protein TERM 3729 4971771 - 4971750 - G 71 -5.1 -4.46212 | overlap 4971752 TTGTCGAGCAGAAAA TCGCGCAGA AATG TCCGCACAA ATGTATCGAGCCAAA Rcas_3801 4973294 - 4972017 - | tetratricopeptide TPR_4 Rcas_3802 4973389 - 4973667 + | hypothetical protein Rcas_3803 4973944 - 4973639 - | hydrogenase maturation protease Rcas_3804 4974404 - 4973931 - | hydrogenase maturation protease Rcas_3805 4976027 - 4974405 - | nickel-dependent hydrogenase large subunit Rcas_3806 4977026 - 4976055 - | NADH ubiquinone oxidoreductase 20 kDa subunit Rcas_3807 4977754 - 4977059 - | hydrogenase accessory protein HypB TERM 3730 4977694 - 4977674 - G 71 -12.5 -3.06302 | overlap 4977661 4977660 ACCAGCGGCATGGAA GCGGCTGCG CAA CTCAGCCGC CAGACGGTCATTCTT Rcas_3808 4978643 - 4977732 - | hypothetical protein Rcas_3809 4980485 - 4979268 - | hypothetical protein Rcas_3810 4980989 - 4980573 - | hydrogenase nickel insertion protein HypA Rcas_3811 4982019 - 4981210 - | beta-lactamase domain-containing protein Rcas_3812 4982979 - 4982032 - | ribose-phosphate pyrophosphokinase TERM 3731 4982368 - 4982397 + g 71 -8.5 -3.85698 | gap 1, opp_overlap 4982358, overlap 4982370 GATAATCTCGACAAT GTGCGCGT-GCTCA TCA TGCGCGACGCGCTC TTTGTCGCCAACCGC TERM 3732 4982433 - 4982448 + g 78 -3.2 -5.00616 | overlap 4982432 AGACGCCAAGATACC GCGC ATATTTCC GCGC TTTTTTGGCAAAACC TERM 3733 4982657 - 4982673 + g 84 -2.1 -5.28826 | overlap 4982646 4982661 ACTCGCGCGCGGATC GACACGC GCG GCTCGTC TTTTTTGTCCCCTTT Rcas_3813 4983561 - 4984823 + | glutamine--scyllo-inositol transaminase TERM 3734 4985866 - 4985850 - f 71 -5.7 -4.37502 | opp_overlap 4985850 4985851, overlap 4985851 4985860 ATTACTATACCAAAA CGCGCGA GAA CCGCCCG CTTGTCGGTCCGGTT TERM 3735 4986687 - 4986666 - g 72 -12.3 -3.2964 | gap 1, overlap 4986654 4986655 AAACCTGCGCCACAA CCGCTG-GCG ACG CGCGCAGCGG CGAATGTCGTGACGA Rcas_3815 4986366 - 4986794 + | hypothetical protein Rcas_3816 4986806 - 4988614 + | hypothetical protein Rcas_3817 4988621 - 4988860 + | hypothetical protein Rcas_3818 4988873 - 4989877 + | ATPase TERM 3736 4990571 - 4990594 + G 70 -12.4 -3.11178 | overlap 4990563 AACTCCGTGGGGTGC GCGGCAAGGC GGGC GCGTTGCCGC TCTTCGCGTTCCTTC Rcas_3819 4990144 - 4991034 + | hypothetical protein Rcas_3820 4991048 - 4992982 + | hypothetical protein Rcas_3821 4992984 - 4995794 + | von Willebrand factor type A TERM 3737 4995965 - 4995923 - f 90 -14.9 -3.59979 | overlap 4995924 4995927 TTCGCTCAGGGTAAA CGCAGCGCGGAATC-TGCGCG GGT CGCGCACGACCCCGCGC-GCT GCTCGGGGTGACCAT TERM 3738 4995964 - 4995924 - f 86 -18.4 -2.75844 | overlap 4995923 4995927 TCGCTCAGGGTAAAC GCAGCGCGGAATC-TGCGCG GGT CGCGCACGACCCCGCGC-GC TGCTCGGGGTGACCA TERM 3739 4995962 - 4995927 - f 88 -19.8 -2.65354 | gap 1, overlap 4995924 4995923 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCGCGC GCTGCTCGGGGTGAC TERM 3740 4996784 - 4996768 - g 76 -9.4 -4.03234 | TCTTTGGCACACAAA CGGTCG ATGAA CGACCG AGCGGCATCGACGAC Rcas_3822 4996500 - 4996976 + | hypothetical protein TERM 3741 4997283 - 4997295 + G 76 -10.5 -3.96148 | CGCGATTGTCGTCAC CCGGC AGG GCCGG TTTGTGGTGCGCCGC Rcas_3823 4997170 - 4998204 + | aminoglycoside phosphotransferase Rcas_3824 4998813 - 4998394 - | CBS domain-containing protein Rcas_3825 4999280 - 4998972 - | hypothetical protein TERM 3742 5000553 - 5000597 + G 73 -6.3 -4.30177 | overlap 5000555 GTCGACTTCTGTCCC AACCTGCCGCGCCTGATTGCG CAT CCTGATCAGTTGCGCCAGGTG TTTCTTAATCTGATG Rcas_3826 4999461 - 5000939 + | GAF sensor signal transduction histidine kinase Rcas_3827 5001354 - 5001755 + | response regulator receiver protein Rcas_3828 5002408 - 5001779 - | hypothetical protein TERM 3743 5002123 - 5002136 + g 73 -6.7 -4.30995 | CAATACTGCCGGTCG TGTCG ATGA CGACA TTCTTTTCTCCGGCA Rcas_3829 5004385 - 5002412 - | acetoacetyl-CoA synthetase TERM 3744 5002490 - 5002515 + g 90 -2.5 -5.52384 | gap 1, overlap 5002492 GTCGCGGTTGGCAGC TTTTTCG-GGCG GGA CGCCACGCAGGA TTTTTTTGATCGGCA TERM 3745 5003620 - 5003602 - G 70 -10.3 -3.55122 | opp_overlap 5003613, overlap 5003598 GATGATCGAAAGGAA CCGCTTC GAACT GAAGCGG AGCATCATAGTTCAG Rcas_3830 5005483 - 5004407 - | chorismate synthase Rcas_3831 5006897 - 5005503 - | TPR repeat-containing protein Rcas_3832 5008591 - 5006921 - | amidohydrolase 3 Rcas_3833 5008785 - 5010983 + | diguanylate cyclase with GAF sensor Rcas_3834 5013722 - 5011137 - | 1A family penicillin-binding protein Rcas_3835 5014626 - 5013808 - | hypothetical protein TERM 3746 5014386 - 5014361 - G 77 -12.6 -3.5774 | gap 1, opp_overlap 5014354 5014357, overlap 5014331 5014329 5014324 5014375 AGCGAACCGCCGAAA CGCGCC-GCGA CATAC TCGCAGGCGCG GCGCGACTCTTCATC Rcas_3836 5014807 - 5015658 + | formamidopyrimidine-DNA glycosylase Rcas_3837 5016199 - 5015624 - | hypothetical protein TERM 3747 5016221 - 5016244 + r 78 -10.3 -3.8917 | gap 1 CTCCTACCGTTGCCG GCGCTCACGC ATACC GCGTG-GCGC TTCTTCTCGTTCGCG Rcas_3838 5017093 - 5016209 - | hypothetical protein TERM 3748 5017383 - 5017418 + r 86 -14.8 -3.34344 | opp_overlap 5017384 5017390, overlap 5017386 5017390 TTTAGGGCTTCAGAA AGCCAAACGCGAGATC GCAC GATCTCGCGTTTGTCG TTCATTAGAGCCTAA TERM 3749 5017417 - 5017384 - R 100 -18.3 -3.86346 | opp_overlap 5017383 5017386 5017390, overlap 5017390 TTAGGGCTTCAGAAA GCCAAACGCGAGATC GCAC GATCTCGCGTTTGTC GTTCATTAGAGCCTA TERM 3750 5017386 - 5017415 + r 88 -19.5 -2.84098 | opp_overlap 5017384 5017390, overlap 5017383 5017390 AGGGCTTCAGAAAGC CAAACGCGAGATC GCAC GATCTCGCGTTTG TCGTTCATTAGAGCC TERM 3751 5017411 - 5017390 - R 93 -14.5 -3.89215 | opp_overlap 5017386 5017383 5017390, overlap 5017384 CTTCAGAAAGCCAAA CGCGAGATC GCAC GATCTCGCG TTTGTCGTTCATTAG TERM 3752 5017390 - 5017411 + r 95 -14.5 -4.10331 | opp_overlap 5017390 5017384, overlap 5017386 5017383 CTTCAGAAAGCCAAA CGCGAGATC GCAC GATCTCGCG TTTGTCGTTCATTAG TERM 3753 5018742 - 5018728 - R 75 -2.1 -5.0133 | gap 1, overlap 5018729 GACCTGCGGAAAAAA CCTGCA CCTG TGC-GG ACGTCTCCCCTACCG TERM 3754 5019505 - 5019463 - R 88 -13.5 -3.59979 | overlap 5019464 5019467 TTCGCTCAGGGTAAA CGCAGCGAGGAATCT-GCGCG GGT CGCGCCAGACCCCTCGC-GCT GCTCGGAGTGACCAT TERM 3755 5019504 - 5019464 - R 84 -17 -2.75844 | overlap 5019463 5019467 TCGCTCAGGGTAAAC GCAGCGAGGAATCT-GCGCG GGT CGCGCCAGACCCCTCGC-GC TGCTCGGAGTGACCA TERM 3756 5019502 - 5019467 - R 85 -18.4 -2.65354 | gap 1, overlap 5019464 5019463 CTCAGGGTAAACGCA GCGAGGAATCT-GCGCG GGT CGCGCCAGACCCCTCGC GCTGCTCGGAGTGAC Rcas_3840 5020715 - 5019819 - | binding-protein-dependent transport systems inner membrane component Rcas_3841 5021658 - 5020708 - | binding-protein-dependent transport systems inner membrane component Rcas_3842 5023384 - 5021678 - | extracellular solute-binding protein Rcas_3843 5024924 - 5023605 - | aminotransferase class-III Rcas_3844 5025703 - 5024921 - | GntR family transcriptional regulator TERM 3757 5025163 - 5025151 - G 75 -3.3 -4.91511 | opp_overlap 5025151 ACCCCATGAGAAAAA GATCG ACA CGCTC TTCATTGCGCTCGAC TERM 3758 5025868 - 5025844 - H 72 -12.2 -3.05384 | gap 1 CGTCGGTCTATTCAA TCGCG-CGTGC CCAC GCACGACGCGA GCCGAAGCATCCAAA TERM 3759 5026191 - 5026208 + G 74 -4.7 -4.63932 | opp_overlap 5026186 5026184, overlap 5026184 CCAGACCACAGGCGA CCGGTCG GACG CGCCTGG TTTTCTTCGGCAATC Rcas_3845 5026004 - 5027698 + | extracellular solute-binding protein TERM 3760 5027739 - 5027781 + F 88 -13.5 -3.59979 | overlap 5027740 ATGGTCACCCCGAGC AGC-GCGAGGGGTCTGGCGCG ACC CGCGC-AGATTCCTCGCAGCG TTTACCCTGAGCGAA TERM 3761 5027740 - 5027780 + F 84 -17 -2.75844 | overlap 5027739 TGGTCACCCCGAGCA GC-GCGAGGGGTCTGGCGCG ACC CGCGC-AGATTCCTCGCAGC GTTTACCCTGAGCGA Rcas_3846 5027899 - 5028822 + | binding-protein-dependent transport systems inner membrane component TERM 3762 5029137 - 5029151 + G 73 -11.4 -3.54029 | GTATCTCTCTGGTGA TGGGCG TCG CGCCCA TTCTGATTGCTGCGG Rcas_3847 5028836 - 5029729 + | binding-protein-dependent transport systems inner membrane component Rcas_3848 5029785 - 5030951 + | mandelate racemase/muconate lactonizing protein Rcas_3849 5031008 - 5032270 + | hypothetical protein Rcas_3850 5032273 - 5033691 + | hypothetical protein Rcas_3851 5033741 - 5034511 + | short-chain dehydrogenase/reductase SDR TERM 3763 5034739 - 5034729 - f 71 -8.2 -4.13014 | opp_overlap 5034729 5034728 5034721 CTGAGATCGTGAAAA CCCC TCT GGGG CTTCCTCGTTCTGAG TERM 3764 5034937 - 5034949 + F 74 -6.3 -4.53303 | opp_overlap 5034937 5034936 TTTCAGACAAAACAG CACAT TGT ATGTG TTTTGTCTCAAACTG TERM 3765 5035378 - 5035422 + G 86 -12.9 -4.07877 | gap 1, opp_overlap 5035383, overlap 5035372 5035382 TTGATGGACCTGATC CACAACGCGGTGCATCAGTC GTATGG GTCTGATGCGCCGCGC-GTG TTGTTTGTCGAATGC TERM 3766 5035382 - 5035419 + G 72 -13.4 -2.77135 | opp_overlap 5035383, overlap 5035372 5035378 TGGACCTGATCCACA ACGCGGTGCATCAGTC GTATGG GTCTGATGCGCCGCGC GTGTTGTTTGTCGAA TERM 3767 5035418 - 5035383 - g 82 -14.7 -3.36327 | opp_overlap 5035372 5035382 5035378 GGACCTGATCCACAA CGCGGTGCATCAGTC GTATGG GTCTGATGCGCCGCG CGTGTTGTTTGTCGA Rcas_3852 5035015 - 5035989 + | GntR family transcriptional regulator TERM 3768 5036977 - 5037015 + G 76 -8.7 -4.12532 | gap 1, overlap 5036970 CTGGCATACGCGGCT GCGGCGGCGATTGAGGCG TTGC CGCCGCCAGCGTCG-CGC TTTGTGTATACCGGG Rcas_3853 5036152 - 5037531 + | hypothetical protein Rcas_3854 5037528 - 5038532 + | succinylglutamate desuccinylase/aspartoacylase Rcas_3855 5038548 - 5039660 + | mandelate racemase/muconate lactonizing protein TERM 3769 5039955 - 5039973 + F 73 -4.5 -4.62085 | overlap 5039965 TGAAGCCATCGTCGG CTTGCGC GGAGA GCACAAG TTCTTTTTTGCGAGT TERM 3770 5039965 - 5039976 + F 78 -2.2 -5.03314 | overlap 5039955 GTCGGCTTGCGCGGA GAGC ACAA GTTC TTTTTTGCGAGTCGC TERM 3771 5040100 - 5040070 - f 78 -10.4 -3.9941 | overlap 5040071 GCGGCTACAATGAAA CCATCACGCCGATG ACG CGCCGACGTGATGA ACAGGGAGTGCATGC Rcas_3856 5040112 - 5040636 + | hypothetical protein Rcas_3857 5041590 - 5040640 - | anti-sigma-factor antagonist Rcas_3858 5042660 - 5041587 - | anti-sigma-factor antagonist Rcas_3859 5042689 - 5043765 + | transposase IS4 family protein Rcas_3861 5044427 - 5045839 + | FAD dependent oxidoreductase TERM 3772 5046413 - 5046397 - T 78 -4.4 -4.81551 | overlap 5046398 CAGCCACAGCAAAAA CCGTTG TCGAT CAACGA TTACCCGGCGCCAGG Rcas_3862 5047814 - 5046414 - | NERD domain-containing protein Rcas_3863 5049651 - 5048026 - | alpha amylase catalytic region Rcas_3864 5050359 - 5052335 + | hypothetical protein TERM 3773 5052371 - 5052358 - T 70 -5.2 -4.45544 | opp_overlap 5052358 TTTGAGCAATCAAAA CCGG CATCGC CCGG TTAAGTCCGCGCAGG Rcas_3865 5055151 - 5052569 - | hypothetical protein TERM 3774 5054819 - 5054805 - G 76 -8.5 -4.19238 | GGTGCAACCGCAAAA GCGCC GACCG GGCGC CCTCGCATACTGACC TERM 3775 5054940 - 5054921 - G 71 -5.6 -4.3665 | gap 1, overlap 5054923 GAAGCCAAAGAGAAA CAGCGCCGC CTC GGGGCGC-G ACCAACGGAAGAGAT TERM 3776 5054939 - 5054923 - G 71 -9.3 -3.77188 | overlap 5054921 AGCCAAAGAGAAACA GCGCCGC CTC GGGGCGC GACCAACGGAAGAGA Rcas_3866 5055295 - 5055459 + | hypothetical protein TERM 3777 5055685 - 5055638 - f 87 -17.5 -3.01712 | overlap 5055663 5055665 5055667 GCGCGCCCGGCAATA GGTGCGCCTGTGGCGCGCCCC GAAATA GAGGCGCGCCTGTGGCGCGCC CGGCAGCCCGGCAAT TERM 3778 5055722 - 5055665 - f 86 -15.3 -3.34398 | gap 1, overlap 5055638 5055663 5055667 5055702 GCGCGCCCCGAAATA GAGGCGCGCCTGTGGCGCGCCCGGCAGC CCG GCAAT-AGGCGCGCCTGTGGCGCGCCCC GAAATAGAGGCGCAT TERM 3779 5055685 - 5055667 - f 89 -17.4 -3.24232 | overlap 5055638 5055663 5055665 GCGCCCCGAAATAGA GGCGCGCC TGT GGCGCGCC CGGCAGCCCGGCAAT TERM 3780 5055720 - 5055702 - f 87 -17.4 -3.02511 | overlap 5055663 5055665 GGCAGCCCGGCAATA GGCGCGCC TGT GGCGCGCC CCGAAATAGAGGCGC Rcas_3867 5056079 - 5057131 + | hypothetical protein TERM 3781 5057207 - 5057225 + F 74 -6 -4.56597 | opp_overlap 5057222 GCTGCATCAAAGGGT TCTGTCTT CCA GAGACGGA TTTTTCCGGCAAGCC TERM 3782 5057528 - 5057516 - g 74 -9.1 -3.83026 | CTTTCGTACACCAAA GCCGA TCA TCGGC ATGGTCCATCTCTGG Rcas_3868 5057442 - 5058293 + | photosystem I assembly BtpA TERM 3783 5058717 - 5058744 + G 75 -13.4 -3.09635 | gap 1 TCATCGCGCAGCGCG CCGC-CGATGCGC TAC GCGCAGCGAGCGG TTCCATCGTCAACAT Rcas_3869 5058344 - 5059072 + | short-chain dehydrogenase/reductase SDR Rcas_3870 5059703 - 5059227 - | molybdenum cofactor biosynthesis protein C TERM 3784 5059748 - 5059729 - H 91 -13.6 -3.74347 | opp_overlap 5059729, overlap 5059722 TGCAGAAATGGGAAA TGCCGCTC GAAC GAGCGGCA TTATGGAGCGGGAGA TERM 3785 5059729 - 5059748 + H 81 -13.6 -3.28712 | opp_overlap 5059729 5059722 TGCAGAAATGGGAAA TGCCGCTC GAAC GAGCGGCA TTATGGAGCGGGAGA Rcas_3871 5060091 - 5062253 + | methylmalonyl-CoA mutase, large subunit Rcas_3872 5062250 - 5064472 + | methylmalonyl-CoA mutase Rcas_3873 5064469 - 5065611 + | arginine/ornithine transport system ATPase Rcas_3874 5066293 - 5067045 + | DtxR family iron dependent repressor TERM 3786 5067339 - 5067310 - gT 78 -13.5 -3.17075 | overlap 5067295 5067330 CGCCTCGCAATGCAA CGCGGCGCAGC AATGATAA GCGGCGCCGCG CTCGAAGCGCCAATC Rcas_3876 5069011 - 5068544 - | hypothetical protein Rcas_3875 5067112 - 5068611 + | RecB family-like nuclease Rcas_3877 5069368 - 5069015 - | hypothetical protein TERM 3787 5069168 - 5069156 - G 86 -6.9 -5.04385 | overlap 5069157 CATATCGGTAAAAAA CGCGA GCG CCGCG CCGCTGACCGCCACC TERM 3788 5069465 - 5069413 - H 90 -14.6 -3.58343 | overlap 5069418 TTTATGATCCCTAAA CAAAACGAGAATTG-GAACTGAGACA GAC TG-CTCAATTCACAATTCTCGTCCTG CGGGATGGTGGGCGA TERM 3789 5069460 - 5069418 - H 100 -13.1 -4.87803 | overlap 5069413 GATCCCTAAACAAAA CGAGAATTG-GAACTGAGACA GAC TG-CTCAATTCACAATTCTCG TCCTGCGGGATGGTG TERM 3790 5070036 - 5070061 + H 100 -15.5 -4.25056 | GTGATGAGGCATCCG GAACCTCACGC GCGC GCGTGGGGTTC TTTGTTAATCCGGTG TERM 3791 5073240 - 5073255 + G 76 -7.5 -4.32857 | opp_overlap 5073251 GAACGGCGCGCAGCC GCGCG AATTGA CGCGC TTTGTCTTTCCACGC Rcas_3878 5070127 - 5073753 + | methionine synthase Rcas_3879 5073843 - 5075018 + | class II aldolase/adducin family protein Rcas_3880 5075134 - 5075844 + | short-chain dehydrogenase/reductase SDR Rcas_3881 5076996 - 5076139 - | hypothetical protein Rcas_3883 5081109 - 5078461 - | multi-sensor hybrid histidine kinase Rcas_3882 5077209 - 5078519 + | hypothetical protein TERM 3792 5080066 - 5080042 - GT 76 -8.4 -4.16842 | opp_overlap 5080052 5080057, overlap 5080044 CGGACCTCCAATAAA CAGGCGGCGC TCCTC GCGCAGCCGG GATTCGCTTTCGGCA TERM 3793 5080064 - 5080044 - GT 71 -9.6 -3.68324 | opp_overlap 5080052 5080057, overlap 5080042 GACCTCCAATAAACA GGCGGCGC TCCTC GCGCAGCC GGGATTCGCTTTCGG Rcas_3884 5082392 - 5081313 - | glycosyl transferase group 1 TERM 3794 5081872 - 5081850 - G 74 -10.5 -3.73953 | overlap 5081851 ATCACCGGCACGAAA GGCTGCGCG GTAGG CGCGCAGCA GAATATCCCATCCTT TERM 3795 5081871 - 5081851 - G 74 -14 -2.84051 | overlap 5081850 TCACCGGCACGAAAG GCTGCGCG GTAGG CGCGCAGC AGAATATCCCATCCT TERM 3796 5082212 - 5082199 - G 71 -5.9 -4.25104 | overlap 5082179 TGCGGCGCATCAAAA CGCAC CGGA GCGCG CTGTAACTCGGCAAT TERM 3797 5082900 - 5082914 + G 79 -9.2 -4.15833 | overlap 5082909 TACGCTCGATGATCG CGGCGG CGA TCGCCG TTTTCGGGTACTGAT TERM 3798 5083411 - 5083433 + G 76 -6.2 -4.66953 | overlap 5083413 GCTCTGACGATTGTG CTGAGCGC ATACGGC GCGCTCCG TTTTTCGCGTGTTCC Rcas_3885 5082544 - 5084841 + | hypothetical protein TERM 3799 5085973 - 5085986 + G 84 -4.5 -5.1356 | gap 1, overlap 5085972 CACTGGCGATCCCGG CGCTGC TCG GC-GCG TTTTTCTTCCTGCAA Rcas_3886 5085330 - 5087090 + | membrane protein-like protein Rcas_3887 5087102 - 5089372 + | hypothetical protein TERM 3800 5090217 - 5090243 + G 81 -7.2 -4.42653 | overlap 5090224 CTATGCGCTCTTCGC GGCAGGTGCATC GCT GATGCTGTTGCC TTTTCTGGCTGGAAT Rcas_3888 5089447 - 5091633 + | hypothetical protein TERM 3801 5092386 - 5092362 - g 73 -10.7 -3.59262 | gap 1, opp_overlap 5092385 CTCTACAGTCCGAAA CCG-GCGCGC CGTATC GCGCGCGCGG CGCTGCATCGCCTGG Rcas_3889 5091633 - 5092478 + | methyltransferase type 11 Rcas_3890 5092479 - 5094143 + | hypothetical protein Rcas_3891 5094209 - 5095342 + | glycosyl transferase group 1 TERM 3802 5095750 - 5095767 + G 73 -8.4 -4.09685 | TCTTATTATTGGTCT TGGCGG GATCAG CCGCCA TTTTCGCAACTGGCC TERM 3803 5096628 - 5096609 - g 73 -6.4 -4.34866 | opp_overlap 5096609 AGCGAAGAAGAGAAA CTGGCG TTGCTGCG CGCCAG TGATTTGCTTCCTTT Rcas_3892 5095727 - 5096953 + | glycosyl transferase group 1 Rcas_3893 5097377 - 5097949 + | hypothetical protein TERM 3804 5097967 - 5098015 + F 79 -12.7 -3.53343 | opp_overlap 5097973 5097983, overlap 5097984 GAGCGGAACATATGC CATATATTCACCATAAGTGATAG TAA CTATCATTTATGGAGGAGGTATG TTTAGCCGCACCGTT TERM 3805 5098516 - 5098528 + G 71 -6.2 -4.32857 | overlap 5098496 CGGCGCAAGCCAGCG CGCC TCGTC GGCG TTTCTGTTTGCCAGC TERM 3806 5098552 - 5098568 + G 84 -2.3 -5.24799 | TGCCAGCCCGGCGTT GAATG AGTTCGC CATTC TTTTTATGTTTGTGA TERM 3807 5098654 - 5098683 + G 85 -9.9 -4.37092 | overlap 5098644 5098644 5098655 GGCGACCGCGTATCT TGCGCCGGTTCTG GGGC TGGATCCGGCGCG TTTTGTGCAGCAGGT Rcas_3894 5098013 - 5099143 + | permease Rcas_3895 5099734 - 5099258 - | ferric uptake regulator family protein Rcas_3896 5099931 - 5100350 + | hypothetical protein TERM 3808 5100658 - 5100638 - g 71 -8.9 -3.85817 | ATTCGTCTGTACAAA CTCGCAGCC GAT GGCCGCCAG AGCGTGATGCGCCTG Rcas_3897 5100464 - 5101147 + | Crp/FNR family transcriptional regulator Rcas_3898 5101620 - 5103023 + | hypothetical protein TERM 3809 5103666 - 5103689 + G 71 -8.1 -3.89822 | TTCGCCTGGTACTTT CGGCGAATC GAAGAG GATGCGCCG TTTATGACGTGGGTC Rcas_3899 5103027 - 5104226 + | hypothetical protein TERM 3810 5104269 - 5104302 + F 74 -11.7 -3.52204 | gap 1, opp_overlap 5104289, overlap 5104286 5104287 GCCCCACACCGCAGC GGCG-GGCAGAGCC AACCAGA GGCGCTGCCGCGCC TTCATTTCGGCGTCC TERM 3811 5104325 - 5104342 + F 72 -14.1 -2.53263 | CGGCGTCCCGCACCA GCCCCGC GAAG GCGGGGC TGCGTTCGCACTCGG TERM 3812 5104458 - 5104473 + F 77 -11.8 -3.65514 | opp_overlap 5104458 5104455, overlap 5104454 AGGCTAAACCAACCA GGGGCG CTGC CGCCCC TTCATTTCATTTCGG TERM 3813 5104501 - 5104518 + F 72 -14.1 -2.53263 | CGGCGTCCCGCACCA GCCCCGC GAAG GCGGGGC TGCGTTCGCGCTCAG TERM 3814 5104521 - 5104541 + F 82 -12.5 -3.64703 | GCGAAGGCGGGGCTG CGTTCGCGC TCA GCGCGGGCG TTTCCCTCCACGCGC TERM 3815 5104672 - 5104689 + F 72 -14.1 -2.53263 | CGGCGTCCCGCACCA GCCCCGC GAAG GCGGGGC TGCGTTCGCGCTCAG Rcas_3900 5105465 - 5106034 + | cold-shock DNA-binding domain-containing protein TERM 3816 5106481 - 5106469 - g 73 -6.9 -4.37092 | opp_overlap 5106469 5106470, overlap 5106470 ATCCGCCTGACAAAA CCGCG ACG CGCGA TTATTGCCTGGATTG TERM 3817 5106690 - 5106745 + G 87 -17.5 -2.90212 | CCACCACCATGCCAT TTGTCTCCGGTGCGGCGCGACCCTC ATTATC GAGGGATGCGCCGCGCTTGAGACGC TCTATGCCCTCCTCG Rcas_3901 5106352 - 5106858 + | ferric uptake regulator family protein Rcas_3902 5107197 - 5106874 - | hypothetical protein Rcas_3903 5107574 - 5107308 - | ribosomal protein S18 Rcas_3904 5107846 - 5107571 - | ribosomal protein L28 TERM 3818 5107782 - 5107816 + g 77 -2.6 -5.03314 | overlap 5107784 CGCGCCCATCCCCCT GACGCCTTGTGGCGAA TGT TGCGCCCAAAAGCGAC TTTTTTGCCGGTAAG Rcas_3905 5108107 - 5107874 - | hypothetical protein Rcas_3907 5109580 - 5110011 + | hypothetical protein Rcas_3908 5110021 - 5110839 + | short-chain dehydrogenase/reductase SDR Rcas_3909 5110820 - 5111800 + | ornithine cyclodeaminase Rcas_3910 5112473 - 5111970 - | cyclic nucleotide-binding protein Rcas_3911 5112576 - 5113160 + | hypothetical protein TERM 3819 5113198 - 5113243 + T 77 -11.2 -3.59979 | gap 3, overlap 5113199 5113204 GGCATGGTCACCCCG AGCAGCGCGAGGGGTCGTGCGCG ACC CGCGC-CGA-TTC-CGCGCTGCG TTTACCCTGAGCGAA TERM 3820 5113199 - 5113242 + T 77 -14.7 -2.75844 | gap 3, overlap 5113198 5113204 GCATGGTCACCCCGA GCAGCGCGAGGGGTCGTGCGCG ACC CGCGC-CGA-TTC-CGCGCTGC GTTTACCCTGAGCGA TERM 3821 5113204 - 5113239 + T 78 -15.4 -2.65354 | gap 1, overlap 5113199 5113198 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGC-CGATTCCGCGC TGCGTTTACCCTGAG Rcas_3912 5114011 - 5113403 - | hypothetical protein TERM 3822 5114020 - 5114033 + r 76 -6.7 -4.4891 | overlap 5114019 ACGGCATATGCGCCT CCATC ACTG GATGG TTTTGTGATGATGGC Rcas_3913 5115010 - 5114141 - | hypothetical protein Rcas_3914 5116085 - 5115252 - | D-mannonate oxidoreductase TERM 3823 5115891 - 5115930 + g 73 -10.9 -3.61268 | gap 3, opp_overlap 5115891, overlap 5115884 GGCGCTGAGCGCAAA CGCA-TCGCTGCCAGCGTCT GCG AGA-GC-GGCGGCGACTGCG TTTGCCGGTTCGATG Rcas_3915 5116383 - 5118371 + | alpha amylase catalytic region Rcas_3916 5118572 - 5118958 + | hypothetical protein Rcas_3917 5119802 - 5119110 - | hypothetical protein Rcas_3919 5120579 - 5120181 - | hypothetical protein Rcas_3920 5120893 - 5120609 - | hypothetical protein Rcas_3921 5121273 - 5120890 - | HEPN domain-containing protein Rcas_3922 5121613 - 5121260 - | DNA polymerase beta subunit Rcas_3923 5122259 - 5121750 - | hypothetical protein TERM 3824 5123370 - 5123385 + H 72 -11.8 -3.34013 | opp_overlap 5123368 CTATACTACCAGACG GCGCGC TGCG GCGCGC TTCATTACACACATC Rcas_3925 5123520 - 5124311 + | ribosomal protein S2 TERM 3825 5124375 - 5124329 - f 74 -13 -3.24232 | opp_overlap 5124331 5124334, overlap 5124325 5124334 5124338 CGGCGGTGAAAGAGA CGCAAGGAAGACTGAAGGCAGC AAC GCCGCCTTCGATCTTCCCTGTT TTTATGTCAGAGAGA TERM 3826 5124331 - 5124373 + F 100 -15.6 -4.96848 | opp_overlap 5124329 5124325 5124334 5124338, overlap 5124334 GCGGTGAAAGAGACG CAAGGAAGACTGAAGGCAGC AAC GCCGCCTTCGATCTTCCCTG TTTTTATGTCAGAGA TERM 3827 5124370 - 5124334 - f 90 -18.1 -3.21872 | opp_overlap 5124331 5124334, overlap 5124329 5124325 5124338 GTGAAAGAGACGCAA GGAAGACTGAAGGCAGC AAC GCCGCCTTCGATCTTCC CTGTTTTTATGTCAG TERM 3828 5124334 - 5124370 + F 83 -15.9 -3.05962 | opp_overlap 5124334 5124329 5124325 5124338, overlap 5124331 GTGAAAGAGACGCAA GGAAGACTGAAGGCAGC AAC GCCGCCTTCGATCTTCC CTGTTTTTATGTCAG TERM 3829 5124366 - 5124338 - f 72 -11.7 -3.40258 | opp_overlap 5124334 5124331, overlap 5124334 5124329 5124325 AAGAGACGCAAGGAA GACTGAAGGCAGC AAC GCCGCCTTCGATC TTCCCTGTTTTTATG Rcas_3926 5124401 - 5124931 + | translation elongation factor Ts TERM 3830 5125526 - 5125553 + G 71 -13.5 -2.65298 | gap 1, overlap 5125525 5125528 CATCCGCCGCCGCGC GACGCGCCACCT CGAAA AGG-GGCGCGTC ATTATCCTCGCTGCC Rcas_3927 5125170 - 5125901 + | uridylate kinase Rcas_3928 5125922 - 5126479 + | ribosome recycling factor TERM 3831 5126656 - 5126678 + G 70 -10.5 -3.56643 | overlap 5126657 ATCATGGATGGGAAT GGGCGCTGG GCGCG CCAGCGCCA TTTGCCGCGTCTCGC TERM 3832 5126657 - 5126677 + G 72 -14 -2.73771 | overlap 5126656 TCATGGATGGGAATG GGCGCTGG GCGCG CCAGCGCC ATTTGCCGCGTCTCG TERM 3833 5127100 - 5127084 - g 72 -7.3 -4.1899 | TGACGTGACGGAAAA GATGATC AGT GATCACC TCTCGACCCGTGGTA Rcas_3929 5126602 - 5127312 + | undecaprenyl diphosphate synthase TERM 3834 5127905 - 5127922 + G 78 -10.5 -4.0942 | GCCGGGGGCATGCTT GGCGCTC TCGC GGGCGCC TTTCTGTCCTGGGTA Rcas_3930 5127317 - 5128165 + | phosphatidate cytidylyltransferase Rcas_3931 5128266 - 5129984 + | single-stranded-DNA-specific exonuclease RecJ Rcas_3932 5129997 - 5131868 + | CBS domain-containing protein TERM 3835 5131896 - 5131923 + G 76 -13.5 -3.15999 | TTTTTGTTTCGCCGC CGACCGGCTCA TCTCCC TGAGTCGGTCG TTGCCTATCTCGAGG TERM 3836 5132250 - 5132267 + G 79 -11.3 -3.91897 | CTGGTGGTGCATGTG GCCGATG TGGA CATCGGC TTTCTGCGTCAGGCA Rcas_3933 5131878 - 5132576 + | DNA polymerase III, epsilon subunit TERM 3837 5132583 - 5132601 + F 73 -4.4 -4.59511 | opp_overlap 5132586, overlap 5132586 TTGCGGTGAGCGGAA GCAGGCGC ATA GCGCCTTA TTTTTACACAATCTT TERM 3838 5132586 - 5132598 + F 87 -10.5 -4.40963 | opp_overlap 5132586, overlap 5132583 CGGTGAGCGGAAGCA GGCGC ATA GCGCC TTATTTTTACACAAT Rcas_3934 5132793 - 5134712 + | acetate--CoA ligase Rcas_3935 5134760 - 5136712 + | acetate--CoA ligase TERM 3839 5136753 - 5136714 - T 82 -13 -3.57144 | opp_overlap 5136694 5136719 5136726, overlap 5136715 5136718 CGCTGGAGGGGTAAA CGCAGCGTTGAACGTTCA GCGT TGAATGTTCAACGCTGAA CGTTCATTCAACATG TERM 3840 5136752 - 5136715 - T 77 -14.3 -2.74144 | opp_overlap 5136694 5136719 5136726, overlap 5136714 5136718 GCTGGAGGGGTAAAC GCAGCGTTGAACGTTCA GCGT TGAATGTTCAACGCTGA ACGTTCATTCAACAT TERM 3841 5136749 - 5136718 - T 76 -14.6 -2.64803 | opp_overlap 5136694 5136719 5136726, overlap 5136715 5136714 GGAGGGGTAAACGCA GCGTTGAACGTTCA GCGT TGAATGTTCAACGC TGAACGTTCATTCAA TERM 3842 5136726 - 5136755 + T 95 -19.5 -3.35073 | opp_overlap 5136718 5136715 5136714, overlap 5136719 5136694 AAACGCAGCGTTGAA CGTTCAGCGTTGA ATGT TCAACGCTGAACG TTCATTCAACATGAT Rcas_3936 5137305 - 5136757 - | GCN5-related N-acetyltransferase TERM 3843 5138067 - 5138097 + G 72 -11.9 -3.30159 | gap 2 GGCATCCATCGCCTG CTGGCGCTCCAGCGC GAG GCGCTGG--CGCCGG TTGTGGAAAGGTTGG Rcas_3937 5137386 - 5138171 + | ribonuclease PH Rcas_3938 5140036 - 5138222 - | hypothetical protein TERM 3844 5140133 - 5140179 + r 70 -12.4 -2.87132 | gap 3, opp_overlap 5140128, overlap 5140149 GCCACAGAGAGCGCG GATGCCCGC-CGCCAGCT-CCGC GCAG GCGGGGGCTG-CGTGCGCGCATC TGTCTGAAAACGGCG TERM 3845 5140380 - 5140335 - R 88 -14.2 -3.59979 | gap 3, overlap 5140336 5140339 5140367 TTCGCTCAGGGTAAA CGCAG--CGAGGAATCT-GCGCG GGT CGCGCAAGACCCCTCGCGCTGCG CGGGGTGACGATGCT TERM 3846 5140376 - 5140336 - R 84 -17 -2.75844 | overlap 5140335 5140339 5140367 TCGCTCAGGGTAAAC GCAGCGAGGAATCT-GCGCG GGT CGCGCAAGACCCCTCGC-GC TGCGCGGGGTGACGA TERM 3847 5140374 - 5140339 - R 85 -18.4 -2.65354 | gap 1, overlap 5140336 5140335 5140367 CTCAGGGTAAACGCA GCGAGGAATCT-GCGCG GGT CGCGCAAGACCCCTCGC GCTGCGCGGGGTGAC Rcas_3939 5146210 - 5140937 - | alpha-2-macroglobulin domain-containing protein TERM 3848 5141649 - 5141691 + g 77 -13.5 -3.37056 | overlap 5141650 TCGGTTGCCAGCGGA TGGCGC-GGGGATGCGTGATG GAT CG-CACGCATCGCCAGCGCCG TTGTGGCTACGTCGT TERM 3849 5141650 - 5141690 + g 74 -14.8 -2.61912 | overlap 5141649 CGGTTGCCAGCGGAT GGCGC-GGGGATGCGTGATG GAT CG-CACGCATCGCCAGCGCC GTTGTGGCTACGTCG TERM 3850 5144190 - 5144168 - G 81 -16.4 -2.70932 | TGGCGGTTCGAACGA TTGCCCGTCA ACC TGACGGGCAA AACCGCGGATCGATA TERM 3851 5144927 - 5144907 - G 100 -3.9 -5.40072 | GGCGCCGTAAAAAAA CGCACCTGA TAG TCACGTTCG AGCGCAACGCCGGCA TERM 3852 5146151 - 5146125 - G 74 -10 -3.80573 | overlap 5146126 GGGAGGATGAGGAAA CGCGCTCCTGGC AGC GCCAGGGACGCC ACCACAATGACCAGC TERM 3853 5146150 - 5146126 - G 74 -13.5 -2.88023 | overlap 5146125 GGAGGATGAGGAAAC GCGCTCCTGGC AGC GCCAGGGACGC CACCACAATGACCAG Rcas_3940 5147500 - 5146292 - | glycosyl transferase group 1 Rcas_3941 5148215 - 5147502 - | methyltransferase type 11 TERM 3854 5147931 - 5147921 - G 72 -2.4 -4.80737 | CAATACAAAAAACAA CGTC AAA GGCG GCGTTCTGAAATGGC TERM 3855 5148239 - 5148297 + r 77 -11 -3.67597 | opp_overlap 5148235 5148238 5148237, overlap 5148241 5148276 AAGCGTTACAACACC CTCGGCGACGCCGTCTGCGGCGC-CG GTTGTTCGG CGTGCGCTGCGGACGGTTCCGCC-AG TTCTTCGATCAGGCG Rcas_3942 5149416 - 5148229 - | glycosyl transferase group 1 TERM 3856 5148322 - 5148355 + g 82 -10.9 -4.07687 | CAGGCGCACCAGCGG CATCCATGAGTCGCG CTCG CGCGCCACACGGATG TTTTGGGCAAACGGT TERM 3857 5148422 - 5148394 - G 72 -3.8 -4.65895 | gap 1, overlap 5148402 CCCCTCACGGAAAAA GCG-CACAATGGC ATCC GCCAGTGCAACGC TATCCCCTGGCGGAA Rcas_3943 5151518 - 5149413 - | hypothetical protein Rcas_3944 5152076 - 5151540 - | dual specificity protein phosphatase Rcas_3945 5152230 - 5152508 + | AsnC family transcriptional regulator TERM 3858 5152662 - 5152691 + G 78 -9.9 -3.99324 | gap 1 GTGGCGAGCATGTCA CTTCGGTACGCGCG GGG CGCGCGC-CCGCAG TTTGTCGTCCTCGAC Rcas_3946 5152521 - 5152895 + | hypothetical protein Rcas_3947 5153529 - 5152921 - | hypothetical protein TERM 3859 5153389 - 5153379 - G 100 -4.6 -6.13503 | GAGCAATAAAAAAAA CCCA TTC CGGG GGGCCAAAGTTGGGG Rcas_3948 5153558 - 5154046 + | hypothetical protein Rcas_3949 5154091 - 5155542 + | glutamyl-tRNA(Gln) amidotransferase, B subunit Rcas_3950 5155646 - 5156839 + | putative esterase Rcas_3951 5156854 - 5157756 + | ABC transporter related Rcas_3952 5157756 - 5158628 + | hypothetical protein Rcas_3953 5159486 - 5158641 - | hypothetical protein Rcas_3954 5160596 - 5159493 - | CaCA family Na(+)/Ca(+) antiporter Rcas_3955 5160730 - 5162091 + | putative signal transduction histidine kinase Rcas_3956 5162136 - 5163848 + | peptidoglycan glycosyltransferase Rcas_3957 5163901 - 5165274 + | peptidase S41 Rcas_3958 5165274 - 5165864 + | imidazoleglycerol-phosphate dehydratase TERM 3860 5165941 - 5165983 + G 78 -6.3 -4.59773 | gap 2, opp_overlap 5165971, overlap 5165926 CGCCGCCGAAGCCGT GGGGTT-CGCTGCG-CTCTGG ACG CCGGAAACGCAGCATAATCCC TTTTTGCCGCTGACG Rcas_3959 5165861 - 5166889 + | luciferase family protein Rcas_3960 5166899 - 5167213 + | DNA polymerase beta subunit Rcas_3961 5167200 - 5167541 + | hypothetical protein TERM 3861 5168027 - 5168047 + G 80 -5.3 -4.87665 | overlap 5168028 CGGTCACGCGCTCTG CTGCCAACG GTG CGCTGGCAA TTTTTGTCGATGGAC Rcas_3962 5167561 - 5168766 + | laminin G Rcas_3963 5168856 - 5169785 + | LamG domain-containing protein TERM 3862 5170031 - 5170017 - g 82 -11.4 -4.07687 | opp_overlap 5170022, overlap 5170020 AGTTCTGGCTGAAAA CGACGG CCG CCGTCG GCGCATGCTCGCCGG Rcas_3964 5169785 - 5170879 + | LamG domain-containing protein Rcas_3965 5171089 - 5171412 + | hypothetical protein Rcas_3966 5171424 - 5172131 + | short-chain dehydrogenase/reductase SDR TERM 3863 5172119 - 5172138 + F 100 -12.2 -4.72272 | GGTCATCTACCTTGG CGGCGTTT CCTG AAACGCCG TTTTTCATACGAGGA Rcas_3967 5172161 - 5173504 + | AMP-dependent synthetase and ligase Rcas_3968 5173506 - 5175011 + | hypothetical protein TERM 3864 5175656 - 5175688 + G 74 -14.7 -2.62389 | opp_overlap 5175647 5175651, overlap 5175655 CTGAAACGCAGCATG TCGCCGCGCCGCCGT GAT GCGGCTGCGCGTCGG ATTCTCGATCACTTC Rcas_3969 5175011 - 5176030 + | hexapaptide repeat-containing transferase TERM 3865 5176844 - 5176828 - g 83 -5.1 -4.99134 | overlap 5176830 AGTCGAAAGCAAAAA TCTGGCG CAT CACCAAA TCGCATCTGCGCTTT Rcas_3970 5176182 - 5176940 + | glycosyl transferase family protein Rcas_3971 5176937 - 5178022 + | UDP-N-acetylglucosamine 2-epimerase TERM 3866 5178124 - 5178079 - f 73 -9.8 -3.59979 | gap 3, overlap 5178080 5178083 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACTATGCC TERM 3867 5178123 - 5178080 - f 73 -13.3 -2.75844 | gap 3, overlap 5178079 5178083 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACTATGC TERM 3868 5178118 - 5178083 - f 72 -14 -2.65354 | gap 1, overlap 5178080 5178079 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_3972 5178263 - 5178640 + | hypothetical protein Rcas_3973 5178822 - 5180174 + | hypothetical protein Rcas_3974 5180220 - 5181686 + | undecaprenyl-phosphate galactose phosphotransferase TERM 3869 5182612 - 5182556 - g 100 -11.7 -5.16151 | gap 4, overlap 5182559 CAAAGTCAACAAAAA GGA--GCCGCTGCGCGCCG-AAC-TCGAA GCC TTCGCCGCTGCGGCGCGCTGCGGCGGTCC TGCGCCGGTGCGTCC TERM 3870 5182607 - 5182559 - g 95 -18.2 -3.39664 | gap 2, overlap 5182556 AGTCAACAAAAAGGA GCCGCTGCGCGCCG-AAC-TCGAA GCC TTCGCCGCTGCGGCGCGCTGCGGC GGTCCTGCGCCGGTG Rcas_3975 5181702 - 5182787 + | oxidoreductase domain-containing protein TERM 3871 5182819 - 5182835 + F 82 -15.1 -3.1855 | ATGGCGACCCCTGAA GCGGCGC CAT GCGCCGC TTCGATGTTGGACGC Rcas_3976 5182827 - 5183117 + | hypothetical protein TERM 3872 5183252 - 5183235 - f 75 -2.6 -5.0133 | GAGCGGTCGAAAAAA CAGGCG ATAAAG CGCTTG ACAGGCACGCTGGAG TERM 3873 5183373 - 5183407 + F 100 -8.5 -5.24129 | gap 1 GCGCAACCACTGTCG CCAGGTCGGTCCAGCC GCAA GGTGCGACCG-CCTGG TTTTTTGTCGCCCGC TERM 3874 5184085 - 5184065 - f 70 -10.3 -3.53224 | overlap 5184066 CAGTGTCGTGTGAAA GCCCCCGGC TCA ACCGGGGGA GGTCATGGCAAACTA TERM 3875 5184084 - 5184066 - f 73 -13.8 -2.71791 | overlap 5184065 AGTGTCGTGTGAAAG CCCCCGGC TCA ACCGGGGG AGGTCATGGCAAACT TERM 3876 5185024 - 5184991 - f 89 -10.9 -4.18018 | gap 1 CCTTTCTAGGGAAAA CGCGGCGTAAG-CCGC CGA GCGGTCCGACGCGGCG CCACGTCACGATTCA TERM 3877 5185079 - 5185051 - f 73 -13.8 -2.71731 | gap 1 TTCAGGGGTGAAGGA CCTGAGCCCCGGC GTGC GCCGGGGCGC-GG CACCTTACCAAGTGC TERM 3878 5185500 - 5185467 - f 78 -16 -2.52464 | gap 1 GTGGGGTTGAAGGGA GCGCTGCGGGGGGAC TGCCG ACCCCCCCGC-GCGC GTCGCACCCGTGCGA TERM 3879 5187656 - 5187640 - f 70 -5.1 -4.49337 | overlap 5187632 GCATAACGGATAAAA GCTACCC CGG GGATAAC AGGCTGATCGTGCCC TERM 3880 5188370 - 5188393 + F 100 -18.2 -5.59879 | opp_overlap 5188370 GCTACCACCTCAAAA GGCGGCTTCC CTAT GGAAGCCGCC TTTTTTGTGTTTCTG TERM 3881 5188393 - 5188370 - f 100 -18.2 -4.15565 | opp_overlap 5188370 GCTACCACCTCAAAA GGCGGCTTCC CTAT GGAAGCCGCC TTTTTTGTGTTTCTG Rcas_3977 5188712 - 5189467 + | F420-dependent oxidoreductase, putative Rcas_3978 5189505 - 5190134 + | nitroreductase TERM 3882 5190169 - 5190190 + G 71 -9.3 -3.73072 | TGATTGTCGTTCTGG CGGGAGGCG TCGG CGCCGCTCG TTTCCTCGAAGGGTT Rcas_3979 5190153 - 5191097 + | LPPG:FO 2-phospho-L-lactate transferase TERM 3883 5191773 - 5191789 + G 73 -2.9 -4.75219 | CGAGGATGGACGTTT CTGTTTG GTC CTGACAG TTTTGTTCGTCATTG Rcas_3980 5191344 - 5191976 + | hypothetical protein Rcas_3981 5191970 - 5192959 + | luciferase family protein TERM 3884 5193169 - 5193153 - g 72 -13.7 -2.70932 | opp_overlap 5193149 TGGTCGGCTGAAGGA TCGCGCG ATC CGCGCGA ATCCGTATGTGGCGC Rcas_3982 5192971 - 5193387 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 3885 5193901 - 5193929 + T 100 -18.9 -3.65812 | TCCCTGCCCATAGGC GTCGGGGCAGGTC TCA GACCTGCCCCAAC TTGTATTGCCCGCCA Rcas_3983 5196200 - 5193882 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 3886 5196054 - 5196041 - G 73 -8.1 -3.9693 | CATCGATCGAAACAA TGCGC GCAT GCGCA TACGGGCTTAACACC Rcas_3984 5196509 - 5196213 - | glutamyl-tRNA(Gln) amidotransferase, C subunit Rcas_3985 5197885 - 5196530 - | YbbR family protein Rcas_3986 5198788 - 5197904 - | hypothetical protein Rcas_3987 5202170 - 5198892 - | TPR repeat-containing protein TERM 3887 5202110 - 5202127 + g 74 -9.8 -3.76224 | opp_overlap 5202110 CGTCCCAGTTCATAA GCCGCG CTGCTT CGCGGC TTTGCTCCATCGCGC Rcas_3988 5203108 - 5202317 - | IstB ATP binding domain-containing protein TERM 3888 5202798 - 5202775 - GR 75 -2.2 -4.87133 | overlap 5202776 5202778 AGTTGCCAAACAAAA TGAGCCAGCC GCGT GGTTGGCGCG CATATTCGAGCGCAC TERM 3889 5202971 - 5202991 + gr 93 -6.7 -5.24129 | overlap 5202973 GAGTCTGGCGAAGTC GGGATGCCC AAA GGGCACCGC TTTTTTGTAAAACCC Rcas_3989 5203754 - 5203035 - | primosome, DnaD subunit Rcas_3990 5205359 - 5204025 - | replicative DNA helicase TERM 3890 5204468 - 5204424 - G 76 -12.8 -3.47322 | opp_overlap 5204450 GTCGATGATAATCAA GTCCAC-GCCGGCGCGCGCCTG AAG CCGACGCGC-CCGGCTGCGCAC ATCCATAATGCTCAG TERM 3891 5205537 - 5205498 - R 86 -14.5 -3.28924 | gap 1, opp_overlap 5205505, overlap 5205502 5205505 CACGCGCCTTGAGAA GCGATAATGTGCCAGGGC GCAAT GCCGTGGCACATTATC-C GTGCGAAAATCCTAT TERM 3892 5205534 - 5205502 - R 76 -15 -2.59431 | opp_overlap 5205505, overlap 5205498 5205505 CGCCTTGAGAAGCGA TAATGTGCCAGGGC GCAAT GCCGTGGCACATTA TCCGTGCGAAAATCC TERM 3893 5205531 - 5205505 - R 79 -12.3 -3.45054 | opp_overlap 5205505, overlap 5205502 5205498 CTTGAGAAGCGATAA TGTGCCAGGGC GCAAT GCCGTGGCACA TTATCCGTGCGAAAA TERM 3894 5205505 - 5205531 + r 76 -13 -3.35679 | opp_overlap 5205505 5205502 5205498 CTTGAGAAGCGATAA TGTGCCAGGGCG CAA TGCCGTGGCACA TTATCCGTGCGAAAA Rcas_3991 5206066 - 5205569 - | ribosomal protein L9 Rcas_3992 5206847 - 5206185 - | HAD family hydrolase Rcas_3993 5207962 - 5206997 - | beta-lactamase domain-containing protein Rcas_3994 5208004 - 5208777 + | inositol monophosphatase Rcas_3995 5209319 - 5208921 - | ribosomal protein S9 Rcas_3996 5209780 - 5209340 - | 50S ribosomal protein L13 Rcas_3997 5210589 - 5209777 - | tRNA pseudouridine synthase A Rcas_3998 5210939 - 5210589 - | ribosomal protein L17 Rcas_3999 5211925 - 5210954 - | DNA-directed RNA polymerase, alpha subunit TERM 3895 5211846 - 5211858 + g 70 -7.7 -4.07687 | TGCCCATACCCGGGA TCGAG CGG CTCGA TTTTGAACCGCCCAT Rcas_4000 5212640 - 5212020 - | ribosomal protein S4 TERM 3896 5212411 - 5212383 - G 73 -13.2 -3.13163 | opp_overlap 5212382 5212381, overlap 5212381 5212379 5212377 CAGTATCAACAGATA CGCACCGGTTTC TCCCG GAAACCGTTGCG CCTTCTCGAATATAC Rcas_4001 5213077 - 5212661 - | 30S ribosomal protein S11 TERM 3897 5212986 - 5213006 + g 73 -3.2 -4.79949 | gap 1, opp_overlap 5212986, overlap 5212992 AACGTGCTCTGAATA TGCGCCTGC CCAC GC-GGCACA TTCTTTTTTTCGCGG Rcas_4002 5213526 - 5213143 - | 30S ribosomal protein S13 Rcas_4003 5213734 - 5213618 - | ribosomal protein L36 Rcas_4004 5214064 - 5213843 - | translation initiation factor IF-1 TERM 3898 5213943 - 5213923 - G 70 -7.6 -4.07568 | GGTCCCCTTTCAAAA TGCGAATG TAGTT CATCCGCA TACGCCCCGAAATAT Rcas_4005 5214761 - 5214081 - | nucleoside-triphosphate--adenylate kinase Rcas_4006 5216149 - 5214797 - | preprotein translocase, SecY subunit Rcas_4007 5216720 - 5216196 - | ribosomal protein L15 Rcas_4008 5217013 - 5216786 - | ribosomal protein L30 Rcas_4009 5217559 - 5217017 - | ribosomal protein S5 TERM 3899 5217331 - 5217347 + g 72 -2.1 -4.7078 | opp_overlap 5217328, overlap 5217334 TCGTGCCAGCAAGCG GCACCCG GAT CAGGTTC TTTTTGGCTGCTTCC Rcas_4010 5218023 - 5217658 - | ribosomal protein L18 Rcas_4011 5218658 - 5218095 - | ribosomal protein L6 TERM 3900 5218455 - 5218478 + g 74 -9.6 -3.96148 | gap 1, overlap 5218458 AATGAGCGAGCGCGT CAAC-CCGTGC AGG GCGCGGTGTTG TTTCTGATCCGAAAG Rcas_4012 5219077 - 5218679 - | ribosomal protein S8 Rcas_4013 5219317 - 5219132 - | ribosomal protein S14 Rcas_4014 5219925 - 5219383 - | ribosomal protein L5 Rcas_4015 5220308 - 5219976 - | ribosomal protein L24 Rcas_4016 5220697 - 5220329 - | ribosomal protein L14 Rcas_4017 5220960 - 5220700 - | ribosomal protein S17 Rcas_4018 5221172 - 5220972 - | ribosomal protein L29 Rcas_4019 5221594 - 5221169 - | 50S ribosomal protein L16 Rcas_4020 5222391 - 5221609 - | ribosomal protein S3 Rcas_4021 5222778 - 5222437 - | ribosomal protein L22 Rcas_4022 5223098 - 5222811 - | ribosomal protein S19 TERM 3901 5222931 - 5222953 + g 71 -13.4 -2.62184 | opp_overlap 5222921 ATACACCGGCACGTG GCGCCGTCCA TCG TGGACGGCGA TGGTGTGCCCGACCA Rcas_4023 5223950 - 5223123 - | 50S ribosomal protein L2 Rcas_4024 5224238 - 5223954 - | ribosomal protein L25/L23 TERM 3902 5223996 - 5224008 + g 76 -5.5 -4.62069 | overlap 5223974 ATCACCTTCAGCCAG GGTGA CGA TCGCC TTTTTCCAATCGGGC Rcas_4025 5224903 - 5224238 - | ribosomal protein L4/L1e Rcas_4026 5225588 - 5224956 - | ribosomal protein L3 TERM 3903 5225625 - 5225635 + r 71 -6.8 -4.2679 | overlap 5225601 5225621 GTGTGCTCATCCACC GCAG CGG CTGC TTTTCCTCAGAATTA Rcas_4027 5225956 - 5225648 - | 30S ribosomal protein S10 Rcas_4028 5227257 - 5226052 - | elongation factor Tu Rcas_4029 5229421 - 5227316 - | translation elongation factor G Rcas_4030 5229990 - 5229517 - | 30S ribosomal protein S7 Rcas_4031 5230483 - 5230049 - | 30S ribosomal protein S12 TERM 3904 5231584 - 5231608 + G 71 -9.1 -3.72893 | GGTTCCGGGTGTTTT CGCCGCCGGCG ATG TGACGACGGCG TTTGGTGAACAGGTG Rcas_4032 5230790 - 5231704 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Rcas_4033 5231849 - 5232325 + | hypothetical protein TERM 3905 5232577 - 5232551 - f 93 -14.5 -3.96148 | opp_overlap 5232551 5232552, overlap 5232552 TGGGGGTACCAGAAA CCGCCCGATGA CTATC TCATCGGGCGA TTGTGTTTAAACAAT TERM 3906 5232551 - 5232577 + F 85 -12.3 -3.81755 | opp_overlap 5232551 5232552, overlap 5232552 TGGGGGTACCAGAAA CCGCCCGATGA CTATC TCATCGGGCGA TTGTGTTTAAACAAT TERM 3907 5232552 - 5232576 + F 81 -15.8 -2.88571 | opp_overlap 5232551 5232552, overlap 5232551 GGGGGTACCAGAAAC CGCCCGATGA CTATC TCATCGGGCG ATTGTGTTTAAACAA TERM 3908 5232576 - 5232552 - f 81 -15.8 -2.97475 | opp_overlap 5232552 5232551, overlap 5232551 GGGGGTACCAGAAAC CGCCCGATGA CTATC TCATCGGGCG ATTGTGTTTAAACAA TERM 3909 5232930 - 5232918 - f 73 -10.5 -3.61902 | GCGCAGGACAGAGAA GCCCC GCA GGGGC GTTCACGAACTCAGC TERM 3910 5233260 - 5233248 - f 73 -10.5 -3.61902 | GCGCAGGACAGAGAA GCCCC GCA GGGGC GTTCACGAACTCAGC TERM 3911 5233404 - 5233422 + F 74 -6.6 -4.4009 | overlap 5233386 5233396 GGCTTCAGCTCGACC CGTGCTGT TGA GCCGCACG TTTTCTGAGCTACGG TERM 3912 5233498 - 5233444 - f 86 -13.4 -3.55761 | overlap 5233495 GAGCTACGGGCTAAA GCCCTCGCTCAGGACCTGGAAGCCCC GCA GGGGCGTTCACGAACTCAGCAAGGGC TTCAGCCCGCTGCGC TERM 3913 5233587 - 5233575 - f 73 -10.5 -3.61902 | opp_overlap 5233575 GCGCAGGACAGAGAA GCCCC GCA GGGGC TTGGGTGATCTCAGT TERM 3914 5233621 - 5233639 + F 74 -6.6 -4.4009 | overlap 5233603 5233613 GGCTTCAGCTCGACC CGTGCTGT TGA GCCGCACG TTTTCTGAGCTACGG TERM 3915 5233715 - 5233661 - f 86 -13.4 -3.55761 | overlap 5233712 GAGCTACGGGCTAAA GCCCTCGCTCAGGACCTGGAAGCCCC GCA GGGGCGTTCACGAACTCAGCAAGGGC TTCAGCCCGCTGCGC TERM 3916 5233902 - 5233914 + F 70 -10.5 -3.54424 | GCTCAGGACCTGGAA GCCCC GCA GGGGC TTTCACGAACTCAGC TERM 3917 5234278 - 5234296 + F 74 -6.6 -4.4009 | overlap 5234260 5234270 GGCTTCAGCTCGACC CGTGCTGT TGA GCCGCACG TTTTCTGAGCTACGG TERM 3918 5234372 - 5234318 - f 86 -13.4 -3.55761 | overlap 5234369 GAGCTACGGGCTAAA GCCCTCGCTCAGGACCTGGAAGCCCC GCA GGGGCGTTCACGAACTCAGCAAGGGC TTCAGCCCGCTGCGC TERM 3919 5234495 - 5234513 + F 74 -6.6 -4.4009 | overlap 5234477 5234487 GGCTTCAGCTCGACC CGTGCTGT TGA GCCGCACG TTTTCTGAGCTACGG TERM 3920 5234589 - 5234535 - f 86 -13.4 -3.55761 | overlap 5234586 GAGCTACGGGCTAAA GCCCTCGCTCAGGACCTGGAAGCCCC GCA GGGGCGTTCACGAACTCAGCAAGGGC TTCAGCCCGCTGCGC TERM 3921 5235029 - 5234975 - f 86 -13.4 -3.53224 | opp_overlap 5234967 5235023 GAGCTGCGGGCTAAA GCCCTTGCTCAGGACATGGAAGCCCC GCA GGGGCGTTCACGAACTCAGCGAGGGC TTCAGCCCGCAGTAT Rcas_4034 5235124 - 5235447 + | hypothetical protein Rcas_4035 5235462 - 5236538 + | hypothetical protein Rcas_4036 5237146 - 5236544 - | hypothetical protein TERM 3922 5236789 - 5236761 - G 76 -13.2 -3.53012 | gap 1, opp_overlap 5236784 5236785 CCGTTGGCGGTCAAA CCGGCGATGCCAA ACCG CTGGCA-CGCCGG GCACCGGCATTGTTC Rcas_4037 5238051 - 5237197 - | Type II site-specific deoxyribonuclease Rcas_4038 5239510 - 5238059 - | putative RNA methylase TERM 3923 5238222 - 5238206 - G 90 -2.2 -5.5112 | opp_overlap 5238206, overlap 5238207 CCTAGGAACAAAAAA TCCGAG CGACT CTCCGA TTTCGCTCAGGCAAA TERM 3924 5239171 - 5239183 + g 70 -7.7 -4.08767 | CATGATGACTGATGG GCGAA ACC TTCGC TTTTGCCAACATAAC Rcas_4039 5239957 - 5239745 - | hypothetical protein TERM 3925 5239990 - 5240038 + r 100 -31.2 -3.33815 | gap 1, overlap 5239993 TCGTTGATCCATCGG CGGGGCGGGTCTGCGACCCGCCC GTTG GGGCGGGTCGCAGACCC-TCCTG TTCGTTGGGGCGGGT TERM 3926 5239993 - 5240036 + r 100 -34 -3.23853 | overlap 5239990 TTGATCCATCGGCGG GGCGGGTCTGCGACCCGCCC GTTG GGGCGGGTCGCAGACCCTCC TGTTCGTTGGGGCGG TERM 3927 5240046 - 5240095 + r 72 -13.6 -2.60075 | overlap 5240045 5240074 5240075 CCCTCCTGTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3928 5240075 - 5240124 + r 72 -13.6 -2.60075 | overlap 5240046 5240045 5240074 5240103 5240104 CCCTCCCGTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3929 5240104 - 5240153 + r 72 -13.6 -2.60075 | overlap 5240075 5240074 5240103 5240132 5240133 CCCTCCCGTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3930 5240133 - 5240182 + r 72 -13.6 -2.60075 | overlap 5240104 5240103 5240132 5240161 5240162 CCCTCCCGTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3931 5240162 - 5240211 + r 72 -13.6 -2.60075 | overlap 5240133 5240132 5240161 5240190 5240191 CCCTCCCGTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTG GGGCGGGTC-GCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3932 5240190 - 5240241 + r 72 -11.4 -3.33815 | overlap 5240162 5240161 5240191 5240219 5240220 ACCCTCCCGTTCGTT GGGGCGGGTCGCAGACCCTCCC GTTCGTTG GGGCGGGTCTCAGACCCTCCCG TTCGTTGGGGCGGGT TERM 3933 5240191 - 5240240 + r 76 -14.9 -2.60075 | overlap 5240162 5240161 5240190 5240219 5240220 CCCTCCCGTTCGTTG GGGCGGGTCGCAGACCCTCCC GTTCGTTG GGGCGGGTCTCAGACCCTCCC GTTCGTTGGGGCGGG TERM 3934 5240219 - 5240270 + r 72 -11.4 -3.33815 | overlap 5240191 5240190 5240220 ACCCTCCCGTTCGTT GGGGCGGGTCTCAGACCCTCCC GTTCGTTG GGGCGGGTCGCAGACCCTCCCG TTCGTTGGGGCGGGT TERM 3935 5240220 - 5240269 + r 76 -14.9 -2.60075 | overlap 5240191 5240190 5240219 CCCTCCCGTTCGTTG GGGCGGGTCTCAGACCCTCCC GTTCGTTG GGGCGGGTCGCAGACCCTCCC GTTCGTTGGGGCGGG Rcas_4040 5241752 - 5240325 - | nitrogenase Rcas_4041 5243179 - 5241749 - | nitrogenase component I, alpha chain TERM 3936 5243023 - 5243066 + gr 77 -11.7 -3.63515 | opp_overlap 5242980, overlap 5243016 5243024 CGCGACAGCCGGCGT AGGTGCAACCACGCTCGGT CATATC ACCGGGGGTGGTTGCAACA TTGTTGGCGATGAAG TERM 3937 5243024 - 5243065 + gr 78 -15.2 -2.77895 | opp_overlap 5242980, overlap 5243016 5243023 GCGACAGCCGGCGTA GGTGCAACCACGCTCGGT CATATC ACCGGGGGTGGTTGCAAC ATTGTTGGCGATGAA Rcas_4042 5244089 - 5243148 - | radical SAM domain-containing protein Rcas_4043 5244938 - 5244117 - | nitrogenase iron protein TERM 3938 5244401 - 5244435 + g 74 -10 -3.76176 | gap 1, opp_overlap 5244401 GCGAATTGCAGACGA GTCCGCCGAG-GCGG GCATAG CCGCGTTCGGCGAAC TTCTTAATGCCTTTG TERM 3939 5245713 - 5245733 + H 85 -15.4 -3.14683 | opp_overlap 5245713, overlap 5245721 5245731 TCTACCCTGAGAGGA GCGCCGGG CGCGC CCCGGCGC TTGGTCAAGGCGTGT TERM 3940 5245733 - 5245713 - H 78 -15.4 -2.62983 | opp_overlap 5245713 5245721 5245731 TCTACCCTGAGAGGA GCGCCGGG CGCGC CCCGGCGC TTGGTCAAGGCGTGT Rcas_4044 5245820 - 5246725 + | hypothetical protein TERM 3941 5247980 - 5247998 + G 70 -12.4 -3.11476 | overlap 5247979 5247986 GCGCTGGCGACGATC CTGCTGGC GCT GCCGGCAG TGCTTTTGCCTGCGT TERM 3942 5248081 - 5248048 - g 84 -15.3 -3.30441 | gap 1, overlap 5248055 GATCATTTCGTACAA GAGCGAACGGGCGCGC GCC ACGCGCCCGCCC-CTC TGGCAACGGCTCTAT TERM 3943 5248075 - 5248055 - g 86 -16.1 -3.21726 | overlap 5248048 TCGTACAAGAGCGAA CGGGCGCGC GCC ACGCGCCCG CCCCTCTGGCAACGG TERM 3944 5248302 - 5248345 + G 93 -14.4 -4.03234 | GCTTGCTGGCATGGA GCGCAGGGCGGGCGCCAGGG GTGG CGCTGGTGACGGCGCTGCGC TTTCTGTCGCGCACG Rcas_4045 5246738 - 5249644 + | hypothetical protein Rcas_4046 5249730 - 5250293 + | hypothetical protein TERM 3945 5250484 - 5250458 - g 76 -10.9 -3.72576 | GTGGTGGTGACGAAA CGCTGGTTGTC CAGGC GACAACGAGCG GAACGCGGATCATCT Rcas_4047 5250349 - 5252997 + | hypothetical protein TERM 3946 5253291 - 5253303 + F 73 -10.5 -3.60627 | opp_overlap 5253291 CGCCCCGGTATAGCA GCCCC AGC GGGGC TTTCACGTGCGGTGA Rcas_4048 5253533 - 5253904 + | hypothetical protein Rcas_4049 5254508 - 5253999 - | hypothetical protein TERM 3947 5254049 - 5254063 + g 95 -10 -4.58395 | TGCCGGGATGGCAGT TGCCAG TGG CTGGCA TTTTTGAGGAATAAC Rcas_4050 5254696 - 5255523 + | cyclase family protein Rcas_4051 5255938 - 5255528 - | hypothetical protein TERM 3948 5255702 - 5255737 + g 78 -10.4 -3.99481 | overlap 5255698 5255704 CAGTCGATGCTCTGG CGTGGCGGTTAACCGA TACA TCGGCTGACCGCCATA TTCTGTTTTGCTCAA TERM 3949 5255704 - 5255735 + g 86 -15.2 -3.57985 | overlap 5255702 5255698 GTCGATGCTCTGGCG TGGCGGTTAACCGA TACA TCGGCTGACCGCCA TATTCTGTTTTGCTC TERM 3950 5258444 - 5258408 - g 81 -13 -3.72576 | gap 1 CTGCCGGTGAGCAAA CTGCCG-GTCGATGGGA CCTT CCCCACCGGCACGGCAG CCTGGGAGAAGCGCA Rcas_4052 5256431 - 5260009 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 3951 5260495 - 5260463 - f 74 -12 -3.51137 | gap 1, overlap 5260464 AACGAGTTTATACAA CCTGCCCCGCTCCTG CACG CGGGAGCGGGG-AGA CCGAAGCCGCGCGCG TERM 3952 5260494 - 5260464 - f 73 -13.3 -2.702 | gap 1, overlap 5260463 ACGAGTTTATACAAC CTGCCCCGCTCCTG CACG CGGGAGCGGGG-AG ACCGAAGCCGCGCGC TERM 3953 5261797 - 5261812 + G 72 -11.8 -3.29461 | opp_overlap 5261790 5261792 5261793, overlap 5261806 ATCGAGAACAGCGGT GCGGCG CTGG CGCCGC TTCTGGCGGGCATTA Rcas_4054 5260684 - 5261997 + | major facilitator transporter Rcas_4055 5262300 - 5263751 + | MATE efflux family protein Rcas_4056 5265333 - 5266073 + | hypothetical protein Rcas_4057 5266468 - 5266797 + | ATP-dependent Clp protease adaptor protein ClpS Rcas_4058 5267873 - 5266803 - | putative virion core protein (lumpy skin disease virus)-like protein Rcas_4059 5268980 - 5268171 - | aspartate/glutamate/uridylate kinase Rcas_4060 5270596 - 5269613 - | UbiA prenyltransferase Rcas_4061 5270727 - 5271341 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Rcas_4062 5271338 - 5272999 + | hypothetical protein Rcas_4063 5275148 - 5273055 - | UvrD/REP helicase TERM 3954 5273816 - 5273787 - G 86 -6.3 -5.07486 | gap 1, opp_overlap 5273787 CAGGTTCAACAAAAA GCGCAGCGCC-GCC GGC GACAGGTCCTGCGC TTCGTCGATCACCAG TERM 3955 5275559 - 5275599 + G 70 -10.3 -3.57406 | overlap 5275557 AGACTGGCTGAGCTT CATTGCCACGACGTTGGGT GCC ATCCTGCGGCGTGGCGAGG TGTTTGTGATCGAGA Rcas_4064 5275284 - 5276120 + | transposase IS4 family protein TERM 3956 5276657 - 5276681 + G 74 -12.1 -3.53012 | GGTGTTGGCGCCGGG CGGCATCGTCG CGC TGACGCTGCCG TTTACGGGCAGCGAG Rcas_4065 5276151 - 5277038 + | methyltransferase type 11 TERM 3957 5277504 - 5277519 + G 81 -10.4 -4.2074 | TGCAGCGGCAGCGCT GGTGGC GGGC GCCACC TTTATCTGTTCGCCC TERM 3958 5279144 - 5279186 + G 74 -12.7 -3.26031 | gap 1, overlap 5279143 5279141 CCTTGCAGGCGCCCG CTGATCCTGACCCGGCGCGC GCTG GCGCGCC-GATCAGCATCCG TCTGTTTGCGCTCGA Rcas_4066 5277082 - 5279229 + | hypothetical protein TERM 3959 5279856 - 5279877 + G 84 -11.5 -4.21319 | opp_overlap 5279842 5279838 5279856 5279872, overlap 5279860 AGCGGGTCGAAGCCA CGCTGCGCG AAAG CGAGCAGCG TTTGTTGCGCTTCCT Rcas_4067 5279387 - 5280676 + | putative PAS/PAC sensor protein Rcas_4068 5281971 - 5280673 - | hypothetical protein TERM 3960 5281485 - 5281464 - G 72 -7.9 -4.12198 | overlap 5281465 CATAATCCTCGAAAA CGCGCAACG CCAT CGTCGCGCC ATTCGGCGCAATCAC Rcas_4069 5283299 - 5282028 - | carboxyl-terminal protease TERM 3961 5283536 - 5283504 - H 74 -6.1 -4.54026 | overlap 5283520 5283522 TCTCAAACAAAAGAA TCCGGCAGGCGAGCA AGA CGCCCGCGCACCTGA GCGAAGTGTGAGCGG Rcas_4070 5283825 - 5284451 + | uracil phosphoribosyltransferase TERM 3962 5284610 - 5284625 + G 78 -10.4 -3.97834 | ACTGCTGACCATTGT GGCGCT GCTG AGCGCC TTTATGATCGCCTTC TERM 3963 5284732 - 5284689 - g 90 -19.6 -2.70932 | opp_overlap 5284707 5284709 CGCCTCTGCGAACGA CGCGGATGGATGCAGCAGCC CGGC GGTCGCCGCACCCATCCGCA CCCTACTGCAAATGT Rcas_4071 5284590 - 5285717 + | glycosyl transferase family protein Rcas_4072 5286277 - 5285726 - | PEBP family protein Rcas_4073 5287732 - 5286524 - | SAM-dependent methyltransferase TERM 3964 5287448 - 5287432 - G 76 -5.7 -4.56597 | overlap 5287434 5287436 CTCCTTCGCCAAAAA CCCAGCG ATA CGCCGTG ATGCCTGCCGCACGC Rcas_4074 5288163 - 5288354 + | hypothetical protein TERM 3965 5288454 - 5288442 - g 78 -3.3 -5.05782 | ATGGAGGGTAAAAAA CCAAC ACG GATGG ACGGCGTTCTGAAAA Rcas_4075 5288382 - 5288825 + | hypothetical protein Rcas_4076 5288844 - 5289482 + | phage SPO1 DNA polymerase-related protein Rcas_4077 5289489 - 5290064 + | hypothetical protein Rcas_4078 5290185 - 5291870 + | beta-lactamase domain-containing protein Rcas_4079 5292699 - 5292031 - | ribosomal-protein-alanine acetyltransferase TERM 3966 5292213 - 5292174 - G 79 -15.8 -2.88822 | overlap 5292171 CCGTCCACATAATCA GCGCGTCCTCGCCATTAT CGGT ATAATAGCGAGGGCGCGT TCCCGCCGGACGAAA Rcas_4080 5293532 - 5292714 - | hypothetical protein Rcas_4081 5293727 - 5294371 + | hypothetical protein Rcas_4082 5294433 - 5295287 + | alpha/beta hydrolase fold Rcas_4083 5295450 - 5295677 + | FmdB family regulatory protein TERM 3967 5296157 - 5296147 - g 74 -4.6 -4.56597 | CGGCTCGTGGAAAAA CCGG TGA CCGA TGAGTCGAAACTGGC Rcas_4084 5295697 - 5296692 + | nucleotidyl transferase Rcas_4086 5298878 - 5297790 - | magnesium chelatase Rcas_4085 5296712 - 5297845 + | hypothetical protein TERM 3968 5297852 - 5297869 + gT 91 -3.4 -5.47218 | GCAGGGTAACGCCCC CTTCGT GAGCGG ACGAGG TTTTTTTGCGTGAGC TERM 3969 5298079 - 5298049 - GT 79 -9.7 -4.13767 | gap 1, overlap 5298052 GCCGTCAGGCGAAAA TCAGCAGCAGCGCG CGCC CGCGCCGCTTC-GA ACAACGCAATCTCTG TERM 3970 5298077 - 5298052 - GT 72 -12.5 -3.09831 | overlap 5298049 GTCAGGCGAAAATCA GCAGCAGCGCG CGCC CGCGCCGCTTC GAACAACGCAATCTC Rcas_4087 5299171 - 5298887 - | hypothetical protein Rcas_4088 5299891 - 5299190 - | peptidase S16 lon domain-containing protein Rcas_4089 5301088 - 5299895 - | arginine biosynthesis bifunctional protein ArgJ Rcas_4090 5302285 - 5301095 - | PUA domain-containing protein TERM 3971 5302234 - 5302223 - G 71 -5.8 -4.37658 | AATCGCTCCAGAAAA CACC CATG GGTG CCGTTGAACCACAGG Rcas_4091 5303114 - 5302431 - | hypothetical protein Rcas_4092 5303877 - 5303116 - | hypothetical protein TERM 3972 5303482 - 5303456 - G 81 -10 -4.18018 | overlap 5303457 TCGCCCCAGGGAAAA CGCCGTCCGTCG CTG CCACGGGCGGCA TACTCCCATTCAGCC TERM 3973 5303919 - 5303933 + r 79 -9.2 -4.17089 | ACGCGAGACTCCAGA CGCTGC CGT GCGGCG TTTTGACAATTTCGA Rcas_4093 5306970 - 5303902 - | SMC domain-containing protein TERM 3974 5305635 - 5305646 + g 70 -7.2 -4.02206 | overlap 5305634 5305643 CTTCGGCAAGTTCGG CGCG CCAG CGCG TTTCGTGTTTCAGTT Rcas_4094 5308204 - 5307035 - | biotin carboxylase-like protein TERM 3975 5308320 - 5308284 - R 73 -10.1 -3.63341 | overlap 5308273 AAGACGCCCCAACAA TCCCGTCCGGGCAGGTC TGA GACCTGCCCCAACAACA CCCCCGTCCGGGCAG Rcas_4095 5310027 - 5309134 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3976 5309404 - 5309388 - G 84 -8.7 -4.51743 | TGACCATGAAAGAAA TGGCTCC GTT GAAGCCA AATTCGTGCGGAAAT TERM 3977 5309908 - 5309880 - G 71 -8.2 -3.91084 | gap 1, opp_overlap 5309904 CCAGTTCGAACGAAA CGACATCGCAATC GCCC GATGGCG-TGTCG CGGAGTGTCGTGGCG Rcas_4096 5310218 - 5311468 + | major facilitator transporter Rcas_4097 5311796 - 5311440 - | hypothetical protein Rcas_4098 5312173 - 5311811 - | anti-sigma-factor antagonist Rcas_4099 5312722 - 5312279 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_4100 5313190 - 5312726 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 3978 5313079 - 5313109 + g 80 -5.5 -4.72272 | gap 1, overlap 5313080 TGAACCCCATGCGCC GT-GCAATTGATGC GGCA GCGTCCATTGCGAC TTTTTCGTAACCAAG Rcas_4101 5314958 - 5313444 - | hypothetical protein TERM 3979 5313983 - 5313996 + g 74 -5.3 -4.57569 | CAACGATGCTCGCTC CATTG ACAG CAATG TTTTTAGCGACCTGA TERM 3980 5314435 - 5314412 - G 72 -2.4 -4.71482 | gap 1, overlap 5314417 ATGAAATCCCAAAAA CGTAAGTCGAC GTA ATCGACTG-CG TCTGGACATCAAACA TERM 3981 5314468 - 5314493 + g 76 -8.2 -4.13246 | opp_overlap 5314454 5314463 5314468, overlap 5314470 AGCGAGTCAACATTA CCGGCTCGCG CAATGT TGCGAGCCTG TTTGTATGTGACATA TERM 3982 5315215 - 5315257 + r 100 -19.3 -3.59979 | ATGGTCACCCCGAGC CGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 3983 5315533 - 5315509 - R 86 -12.8 -3.96148 | TTCGGGTATGAGAAA GCCCCCTCTC TTTTT GTGAGGGGGC AGGAGAGATGGCGCA Rcas_4102 5317127 - 5315577 - | carboxyl transferase TERM 3984 5316705 - 5316686 - G 85 -10 -4.3739 | CATTGCGGTAGAAAA TCTCGGCG TACC CGCCAAGA CTGACGACCCCTTCC TERM 3985 5317539 - 5317568 + G 70 -7.2 -4.06505 | gap 3, overlap 5317551 GCCGTATCTGGCGGC CGGCGC-TC-GCGCG AAT CG-GCTGATGCGCCG TTTCTGGTATGTTGC Rcas_4103 5317294 - 5317635 + | hypothetical protein Rcas_4104 5318155 - 5317643 - | GCN5-related N-acetyltransferase Rcas_4105 5318260 - 5318589 + | thioredoxin Rcas_4106 5318608 - 5318892 + | hypothetical protein Rcas_4107 5320149 - 5319430 - | hypothetical protein Rcas_4108 5320726 - 5320139 - | ECF subfamily RNA polymerase sigma-24 factor Rcas_4109 5320923 - 5321915 + | dihydroxyacetone kinase, DhaK subunit Rcas_4110 5321999 - 5322661 + | dihydroxyacetone kinase, L subunit TERM 3986 5324139 - 5324174 + G 71 -8.8 -3.90112 | opp_overlap 5324138, overlap 5324140 5324150 TGGGGCAACACATAC GGTTGGCGCGCCGCCG GCAA CGGCGTTGCTCCGACA TTTCCTTCAGGAACG Rcas_4111 5322679 - 5324349 + | FAD dependent oxidoreductase TERM 3987 5325381 - 5325423 + G 74 -14.1 -2.90615 | gap 1, opp_overlap 5325380 5325381, overlap 5325372 5325379 5325403 5325415 AATGGTGCGCGAAAC GGC-GCTCGATTTGCCGGTG CGTG CGCCGGCGAACCGCGCCGCC TGGTTTGCGCCGCGT Rcas_4112 5324413 - 5325657 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B Rcas_4113 5325657 - 5326907 + | sn-glycerol-3-phosphate dehydrogenase subunit C Rcas_4114 5326909 - 5327319 + | PTS system fructose subfamily IIA component Rcas_4115 5327375 - 5327650 + | phosphotransferase system, phosphocarrier protein HPr Rcas_4116 5327651 - 5329321 + | phosphoenolpyruvate-protein phosphotransferase TERM 3988 5329812 - 5329799 - g 73 -8.1 -4.08767 | GCGAGTCGGGCAAAA CGTCG CTGA CGACG GTCCACAAAGTGATG TERM 3989 5331215 - 5331230 + G 77 -2.4 -5.00616 | opp_overlap 5331210, overlap 5331216 GCTTTGAAAACATCT TGCCTG ATGA CCGGCG TTTTTTGAACCGGGA Rcas_4117 5329318 - 5331321 + | serine/threonine protein kinase TERM 3990 5331789 - 5331819 + G 79 -9.6 -4.14739 | overlap 5331792 AGTATGATCCGTCTC TGACGCCGCGCGAG GCG CTGGCGCGCCGTGA TTTTACGATCAATGC TERM 3991 5332693 - 5332666 - g 91 -9 -4.65895 | gap 1, overlap 5332667 GGGCGCAGCCAAAAA CCGCCC-CGCGCC ACT GGTGCGCGGGCGT GACCTGATCGCCGCG TERM 3992 5332692 - 5332667 - g 74 -12.5 -3.39216 | gap 1, overlap 5332666 GGCGCAGCCAAAAAC CGCCC-CGCGCC ACT GGTGCGCGGGCG TGACCTGATCGCCGC Rcas_4118 5331455 - 5332831 + | polynucleotide adenylyltransferase/metal dependent phosphohydrolase Rcas_4119 5332923 - 5333372 + | heat shock protein Hsp20 TERM 3993 5333484 - 5333515 + F 80 -11.6 -3.8211 | opp_overlap 5333484, overlap 5333461 CGTTCGACCCACGAA CGCCGGGCAG TTTGAGACATCC CTGCCCGGCG TTGTTGTGCATAGAG TERM 3994 5334013 - 5333985 - g 72 -2.4 -4.8048 | gap 1 GGGGCACATCAAAAA CCGCGAT-ACGCT CATC AGCACGATTGCGG CGACGTTCGCCGGCG Rcas_4120 5333563 - 5334453 + | peptidase M48 Ste24p TERM 3995 5334549 - 5334518 - f 86 -13 -3.9941 | gap 1, overlap 5334520 5334525 CGGTTGACAATTAAA CACCAAT-GCGCCGC GCT GCGGCGCCACTGGGG GAGCCGGATGAGTCC TERM 3996 5334547 - 5334520 - f 88 -14.2 -3.5891 | gap 1, overlap 5334518 5334525 GTTGACAATTAAACA CCAAT-GCGCCGC GCT GCGGCGCCACTGG GGGAGCCGGATGAGT TERM 3997 5334541 - 5334525 - f 77 -15.1 -2.6955 | overlap 5334520 5334518 CAATTAAACACCAAT GCGCCGC GCT GCGGCGC CACTGGGGGAGCCGG TERM 3998 5334650 - 5334684 + F 100 -17.3 -4.48987 | gap 1, opp_overlap 5334648 5334647 GTGTCCAGACAATGT CTGCCGCTGAT-CCAC GTTG GTGGGGTCAGCGGCAG TTTTGATTCTGGCGC Rcas_4121 5334717 - 5335403 + | thiamine-phosphate pyrophosphorylase Rcas_4122 5335476 - 5336288 + | hydroxyethylthiazole kinase Rcas_4123 5336538 - 5337062 + | thiW protein Rcas_4124 5337059 - 5338639 + | ABC transporter related Rcas_4125 5340649 - 5341302 + | cobalt transport protein Rcas_4126 5341313 - 5342113 + | phosphomethylpyrimidine kinase Rcas_4127 5342245 - 5342820 + | hypothetical protein Rcas_4128 5342798 - 5343202 + | HEPN domain-containing protein Rcas_4129 5344934 - 5343216 - | WD40 domain-containing protein Rcas_4130 5345129 - 5345998 + | alpha/beta hydrolase fold TERM 3999 5346143 - 5346186 + G 73 -8.3 -4.08144 | gap 2 GTGCGTATGGTGCAG GAGGGCGACTGGAATCCGCGA CGAT TCGTGTA-TCCA-TCGCTCTC TTTCTACTTGCTGGC TERM 4000 5346913 - 5346930 + G 71 -9.1 -3.74347 | overlap 5346924 GTTGCCGTCGGGCGT CCTGCTG ATGG CGGCAGG TTTGCCGTTTCTGGC TERM 4001 5346924 - 5346937 + G 71 -8.1 -3.86524 | overlap 5346913 GCGTCCTGCTGATGG CGGCA GGTT TGCCG TTTCTGGCGCGCTGT TERM 4002 5347511 - 5347485 - g 76 -13.1 -3.53012 | gap 1, opp_overlap 5347508 CCCGTCTGCTGGAAA GCGGCATG-CCA TTGT TGGTCATGCCGC CGCGCGATCTTGGAT Rcas_4131 5346011 - 5348044 + | glycosyl transferase family protein Rcas_4132 5348252 - 5349199 + | hypothetical protein TERM 4003 5350716 - 5350770 + F 100 -17.8 -4.1585 | overlap 5350717 5350725 ACCCCCGCGTTCGAC GGACGACGCCCACGTAGGGGCAGGTC TGA GACCTGCCCCTACGCCGTTATCGTCA TTTTCGCCGTTATCG TERM 4004 5350717 - 5350769 + F 100 -21.3 -3.09028 | overlap 5350716 5350725 CCCCCGCGTTCGACG GACGACGCCCACGTAGGGGCAGGTC TGA GACCTGCCCCTACGCCGTTATCGTC ATTTTCGCCGTTATC TERM 4005 5350725 - 5350761 + F 100 -20.9 -3.52111 | overlap 5350717 5350716 TTCGACGGACGACGC CCACGTAGGGGCAGGTC TGA GACCTGCCCCTACGCCG TTATCGTCATTTTCG TERM 4006 5351859 - 5351844 - g 72 -11.8 -3.32769 | opp_overlap 5351858, overlap 5351837 GGCGGAAATCATCAA CGCCCC TCCA GGGGCG CCAATTCCGCGGGAG Rcas_4134 5351524 - 5351877 + | hypothetical protein Rcas_4135 5354291 - 5352339 - | putative PAS/PAC sensor protein Rcas_4136 5355172 - 5354657 - | hypothetical protein Rcas_4137 5356473 - 5355178 - | glycosyl transferase group 1 Rcas_4138 5358347 - 5356473 - | glycosyl transferase family protein Rcas_4139 5360194 - 5358374 - | ABC-2 type transporter Rcas_4140 5361937 - 5360198 - | hypothetical protein TERM 4007 5360789 - 5360771 - G 89 -11 -4.26351 | CAGCAACGCAACAAA CAGGATCG TCA CGATCCCG AAACGCGCCCATACG TERM 4008 5360974 - 5360964 - G 79 -8.2 -4.2558 | overlap 5360965 CACCGGCGATCAAAA GCGC GAA GCGC CGCCAGAGCCAGTAT Rcas_4141 5363790 - 5361925 - | polysaccharide deacetylase Rcas_4142 5364017 - 5364577 + | methionine sulfoxide reductase A TERM 4009 5364616 - 5364598 - T 74 -12.4 -3.14344 | GATTCCCGCCAGGAA CGCGACAG CCG CTGCCGCG ACAGGCACGCTCAGG Rcas_4143 5365284 - 5364580 - | phosphatidate cytidylyltransferase Rcas_4144 5367171 - 5365885 - | FAD linked oxidase domain-containing protein Rcas_4145 5367586 - 5367188 - | hypothetical protein Rcas_4146 5369137 - 5367656 - | D-lactate dehydrogenase (cytochrome) Rcas_4147 5369886 - 5369134 - | peptidoglycan-binding LysM TERM 4010 5369630 - 5369616 - G 75 -4.2 -4.79223 | GCACATCAGCAAAAA CCGG GGTGTTG CCGG TCGGTGAAACGACGA TERM 4011 5369823 - 5369810 - G 76 -8.1 -4.24285 | CACATACCGAACAAA CTGGC AATC GCCAG ACCGGTTCCAACCGC Rcas_4148 5371574 - 5370042 - | circadian clock protein KaiC Rcas_4149 5371876 - 5371571 - | KaiB domain-containing protein Rcas_4150 5372825 - 5371950 - | response regulator receiver protein TERM 4012 5372350 - 5372366 + g 84 -13.7 -3.75024 | ATGGCTGCGATCTCA CTGGCGC TGC GCGCCAG TTGTTCCTGCTGGCG Rcas_4151 5374086 - 5372848 - | PAS/PAC sensor signal transduction histidine kinase Rcas_4152 5374259 - 5374627 + | response regulator receiver protein Rcas_4153 5375062 - 5375865 + | SAF domain-containing protein TERM 4013 5375931 - 5375909 - f 95 -5.5 -5.61824 | gap 1, overlap 5375910 5375912 TAAAAGGCAAAAAAA GCAGGGCGGG CGCG CCCACCC-AC GGCGCGGGAAAACCG TERM 4014 5375929 - 5375912 - f 70 -10.5 -3.52477 | overlap 5375909 5375910 AAGGCAAAAAAAGCA GGGCGGG CGCG CCCACCC ACGGCGCGGGAAAAC TERM 4015 5377228 - 5377282 + G 73 -3.6 -4.67692 | gap 3, overlap 5377229 TTGCCACGCTCTCAC TCGCGCCGTCCCGGTCA--CGCGCGAA AGGA TTGGCGGGACTGATC-GAACGGCGCGG TTTCTTTGGTTTTGC Rcas_4154 5376054 - 5377313 + | response regulator receiver protein Rcas_4155 5377329 - 5378744 + | type II secretion system protein E TERM 4016 5379680 - 5379690 + G 71 -4.6 -4.51097 | GGTGCGTTCGTTTCA TCGG TCG CCGG TTTTCTCATCATTCG Rcas_4156 5378759 - 5379730 + | type II secretion system protein Rcas_4157 5379730 - 5380659 + | type II secretion system protein TERM 4017 5380885 - 5380828 - g 81 -11.7 -3.94333 | gap 1, opp_overlap 5380849, overlap 5380829 AACTGAAAATGGAAA TCGAGCAGGCAGGCGTGCCTGCGGCTGC GCC GCCGCCGAAATCGCGCCCGCC-GCGCGC AGTCGTCTTCGGCGG TERM 4018 5380884 - 5380829 - g 79 -15.2 -2.95515 | gap 1, opp_overlap 5380849, overlap 5380828 ACTGAAAATGGAAAT CGAGCAGGCAGGCGTGCCTGCGGCTGC GCC GCCGCCGAAATCGCGCCCGCC-GCGCG CAGTCGTCTTCGGCG Rcas_4158 5380656 - 5381945 + | von Willebrand factor type A TERM 4019 5382026 - 5382009 - f 72 -2.6 -4.77165 | opp_overlap 5382025, overlap 5382010 CGGGTGAGAAGAAAA CGGCGC ATCCCA ACGCCA TGCGTGCCCGCTATG Rcas_4159 5382198 - 5383595 + | TadE family protein TERM 4020 5383665 - 5383639 - f 73 -10.2 -3.57808 | overlap 5383643 GGGAAGGTACAAAGA CAAAGACATTGC ACC GCAACGTCTCCG CATGGAGAACGCGCC TERM 4021 5383661 - 5383643 - f 82 -9.6 -4.40605 | overlap 5383639 AGGTACAAAGACAAA GACATTGC ACC GCAACGTC TCCGCATGGAGAACG Rcas_4160 5383732 - 5384127 + | TadE family protein TERM 4022 5384280 - 5384264 - g 79 -13.7 -3.4052 | CCGCAATGTAATGAA CAGCGCC GAT GGCGCTG CGCTGATCGCCACGC Rcas_4161 5384124 - 5385302 + | hypothetical protein TERM 4023 5385394 - 5385367 - T 86 -14.2 -3.54638 | ATAAGCGCCCTTAAA TCAGCCCAACGG TTAA CCATCGGGCTGA GCAGTGAACGTCCAT Rcas_4162 5386381 - 5385428 - | peptide chain release factor 2 TERM 4024 5386515 - 5386478 - R 77 -11.3 -3.64703 | gap 1, overlap 5386480 5386481 CGCCGGCGAGTCAAA GACTCCCGCGAACGCTCT CGA AGCGCGTCCGCAGGA-CC TCCAGATCCACGGTT TERM 4025 5386514 - 5386480 - R 76 -12.8 -3.40597 | overlap 5386478 5386481 CCGGCGAGTCAAAGA CTCCCGCGAACGCTCT CGA AGCGCGTCCGCAGGAC CTCCAGATCCACGGT TERM 4026 5386513 - 5386481 - R 78 -16.3 -2.64144 | overlap 5386480 5386478 CGGCGAGTCAAAGAC TCCCGCGAACGCTCT CGA AGCGCGTCCGCAGGA CCTCCAGATCCACGG Rcas_4163 5387318 - 5386548 - | silent information regulator protein Sir2 TERM 4027 5386865 - 5386888 + g 70 -8 -4.07568 | overlap 5386866 GGTGACCGCAACTGC ACCGTGGCGG ATCG CCGCGACGGA TTTTGGGCAGCAACA Rcas_4164 5387671 - 5388396 + | LIM zinc-binding protein Rcas_4165 5388520 - 5389707 + | hypothetical protein TERM 4028 5389859 - 5389876 + F 100 -14.1 -4.3255 | opp_overlap 5389859 GTGCTACGCCGAACA GCCCCGC ACCG GCGGGGC TTTGTTCGTTCAGCG TERM 4029 5389876 - 5389859 - f 76 -14.1 -3.04144 | opp_overlap 5389859 GTGCTACGCCGAACA GCCCCGC ACCG GCGGGGC TTTGTTCGTTCAGCG Rcas_4166 5389990 - 5390550 + | metal dependent phosphohydrolase TERM 4030 5391045 - 5391076 + G 70 -11.6 -3.21689 | gap 1, overlap 5391043 CGGCGTTTGGCGGTT CTGCCTGGACG-TTC GAC GAAGCGACCGGGCAG TATTACTATCACTTT Rcas_4167 5390600 - 5392324 + | alpha amylase catalytic region TERM 4031 5392564 - 5392547 - T 78 -14.1 -3.16564 | opp_overlap 5392536 CGCTGATTGCACGAA GCCCCGC TGAC GCGGGGC TGTCGGTCGAAGTCT Rcas_4168 5394565 - 5392676 - | heat shock protein 90 TERM 4032 5393061 - 5393041 - G 73 -8.3 -4.07568 | overlap 5393042 GCGTTTCCTTGAAAA CGTTCACCA ACC TGGTGAACT GCTCATCGCTGATCG TERM 4033 5394094 - 5394069 - G 88 -8.3 -4.79352 | gap 1, opp_overlap 5394074 GCATCGACAACAAAA CTCTCGC-CTCC CTG GGAGCGCCAGAG GGCTGCTTCGGCGTC TERM 4034 5394714 - 5394678 - R 78 -13.7 -3.23274 | opp_overlap 5394685 5394687, overlap 5394687 TTTGTTAGAATTTAA TGTCAGAGAGGCGTTGC GAT GCAACGCCTCTCTGGTC GCGTGTCTCCCTCAG TERM 4035 5394685 - 5394707 + r 86 -17.8 -2.80622 | opp_overlap 5394678 5394687, overlap 5394687 GAATTTAATGTCAGA GAGGCGTTGC GAT GCAACGCCTC TCTGGTCGCGTGTCT TERM 4036 5394705 - 5394687 - R 79 -14.6 -2.9186 | opp_overlap 5394685 5394687, overlap 5394678 ATTTAATGTCAGAGA GGCGTTGC GAT GCAACGCC TCTCTGGTCGCGTGT TERM 4037 5394687 - 5394705 + r 79 -14.6 -2.94925 | opp_overlap 5394687 5394678, overlap 5394685 ATTTAATGTCAGAGA GGCGTTGC GAT GCAACGCC TCTCTGGTCGCGTGT Rcas_4169 5396223 - 5394790 - | secretion protein HlyD family protein TERM 4038 5396282 - 5396318 + r 89 -17.3 -3.17571 | opp_overlap 5396275, overlap 5396284 ATCAATATGGATGGG TGCGCTCCTCGCAGGCG CCG CGCCTGCAAGGAGCATA TTGCATTACGACCTT TERM 4039 5396284 - 5396316 + r 90 -17.7 -3.14878 | opp_overlap 5396275, overlap 5396282 CAATATGGATGGGTG CGCTCCTCGCAGGCG CCG CGCCTGCAAGGAGCA TATTGCATTACGACC Rcas_4170 5399847 - 5396332 - | acriflavin resistance protein TERM 4040 5398434 - 5398413 - G 70 -12.3 -3.14132 | gap 1, opp_overlap 5398417 5398420, overlap 5398415 CCTTGCTGGCAGCAA CA-CGCGGCG TCT CGCCGCGCTG CGTGTGGCGGAAGAT TERM 4041 5398431 - 5398415 - G 83 -15.1 -3.13403 | opp_overlap 5398417 5398420, overlap 5398413 TTGCTGGCAGCAACA CGCGGCG TCT CGCCGCG CTGCGTGTGGCGGAA TERM 4042 5399934 - 5399908 - H 100 -13.1 -4.96468 | gap 1 GAAACTCAAATAAAA CGCAGC-CAGCA GTCT TGCTGCGCTGCG CCGCGCATCGCGCCG TERM 4043 5400883 - 5400912 + G 88 -7.1 -5.1287 | gap 1, overlap 5400883 5400884 GGGCGAGATCGATCC G-GCGCTCGACC CTGAGGC GGTCGTGCGCGC TTTTTTCGGTCTGGC Rcas_4171 5400440 - 5401051 + | TetR family transcriptional regulator TERM 4044 5401256 - 5401215 - T 100 -16.1 -4.45738 | opp_overlap 5401217 5401218 5401222, overlap 5401218 5401219 CATCGGAAGAACAAA CAACGAAGCAATCTCCTCA CACG TGAGGAGATTGCTTCACTT TGCGCGCAATGACGC TERM 4045 5401217 - 5401254 + T 90 -14.3 -3.53811 | opp_overlap 5401215 5401218 5401219, overlap 5401218 5401222 TCGGAAGAACAAACA ACGAAGCAATCTCCTCA CACG TGAGGAGATTGCTTCAC TTTGCGCGCAATGAC TERM 4046 5401218 - 5401253 + T 86 -17.8 -2.72144 | opp_overlap 5401215 5401218 5401219, overlap 5401217 5401222 CGGAAGAACAAACAA CGAAGCAATCTCCTCA CACG TGAGGAGATTGCTTCA CTTTGCGCGCAATGA TERM 4047 5401253 - 5401218 - T 100 -20 -4.33582 | opp_overlap 5401218 5401217 5401222, overlap 5401215 5401219 CGGAAGAACAAACAA CGAAGCAATCTCCTCA CACG TGAGGAGATTGCTTCA CTTTGCGCGCAATGA TERM 4048 5401252 - 5401219 - T 100 -21.3 -3.19065 | opp_overlap 5401218 5401217 5401222, overlap 5401218 5401215 GGAAGAACAAACAAC GAAGCAATCTCCTCA CACG TGAGGAGATTGCTTC ACTTTGCGCGCAATG TERM 4049 5401222 - 5401249 + T 93 -17.2 -3.27525 | opp_overlap 5401219 5401218 5401215, overlap 5401218 5401217 AGAACAAACAACGAA GCAATCTCCTCA CACG TGAGGAGATTGC TTCACTTTGCGCGCA Rcas_4172 5402972 - 5401974 - | hypothetical protein Rcas_4173 5404989 - 5403268 - | acyl-CoA dehydrogenase domain-containing protein TERM 4050 5405114 - 5405131 + H 78 -2.6 -5.14563 | overlap 5405115 CAGAGAAGGCATGCA TGGCGT TGGGAT GCGCCG TTTTTTCCTCCCCCC TERM 4051 5405607 - 5405591 - g 74 -9.4 -3.85698 | GGTGTGTTGCAGAAA CGCGCA GCAGT TGCGCG CGAACGGCTGGCGTC Rcas_4174 5405540 - 5406457 + | radical SAM domain-containing protein Rcas_4175 5406454 - 5406951 + | hypothetical protein Rcas_4176 5407008 - 5407778 + | methyltransferase type 11 TERM 4052 5408209 - 5408158 - g 72 -12.3 -3.29144 | gap 2, opp_overlap 5408165, overlap 5408159 TCATGCCGGGCACAA CGCCCCAGAGAGCGGTTCGGCGC CTGGTGCT GCGCCGC-CCGCTTTC-AGGGCG CCCCCCATTACTCCC Rcas_4177 5407934 - 5408581 + | hypothetical protein Rcas_4178 5408600 - 5408806 + | hypothetical protein Rcas_4179 5410016 - 5408961 - | oxidoreductase molybdopterin binding TERM 4053 5409103 - 5409075 - G 73 -8.8 -4.09108 | gap 1 CTTAACCCACACAAA CCCGCGTTCGCCG GGAG CGACGAG-GCGGG CAGGCGCGCCGTGCC TERM 4054 5409252 - 5409216 - G 70 -7.2 -4.0641 | gap 2 TGTGACCGACACAAA CCGCACC-CAGCGC-GCC TCC GGCAGCACCCCGGCGCGG TCGAGCAGCGCGCCG Rcas_4180 5410634 - 5410020 - | dephospho-CoA kinase Rcas_4181 5412638 - 5410647 - | amidohydrolase TERM 4055 5410869 - 5410887 + g 76 -8.1 -4.2349 | gap 1, opp_overlap 5410868 GTCGCGGTACTGAAT GCGCCAGC GGCG GC-GGCGC TTTTCGATCTCGACG Rcas_4183 5414301 - 5413189 - | DNA methylase N-4/N-6 domain-containing protein Rcas_4184 5414878 - 5414309 - | hypothetical protein TERM 4056 5414528 - 5414516 - G 76 -6.2 -4.56597 | overlap 5414501 CGCCCGGCGGAAAAA GCGG CTTGC CCGC GCCTGTCGCCAGACG TERM 4057 5414784 - 5414804 + g 76 -14.1 -3.14132 | TGCGCCAACGGCGAC CCTGGTTCA TCC TGAACCAGG TTGCTGACACGGCGC Rcas_4185 5415249 - 5414899 - | hypothetical protein TERM 4058 5415351 - 5415309 - R 73 -10.6 -3.61517 | gap 2, opp_overlap 5415310 ATTCGGCGTTAATAA CTCGCCCTTCGGCGGCGCGC ACCAG GCG-GTCGC-GAACGGCGAG GCGCAATCCTTCCCG Rcas_4186 5416359 - 5415292 - | Sua5/YciO/YrdC/YwlC family protein Rcas_4187 5416826 - 5416356 - | flavin reductase domain-containing protein TERM 4059 5416649 - 5416662 + g 74 -2.3 -4.87665 | CAGCGGCAATCGCGT CGTGC GCCC GGACG TTTTTATCAATACAG Rcas_4188 5420596 - 5417054 - | UvrD/REP helicase TERM 4060 5418772 - 5418762 - G 79 -8.2 -4.32034 | overlap 5418764 GCATGATCACCAAAA CGCC ACT GGCG GGTCGAAAGCGGGGG TERM 4061 5419810 - 5419780 - G 88 -16.8 -3.29144 | opp_overlap 5419768, overlap 5419782 5419783 CGATGCGCCCGACAA GACGCGGCGCCTCG TGT CGAAGCGCCGCAAC GATCCGCTCACGCAT TERM 4062 5419808 - 5419782 - G 91 -18 -3.21395 | opp_overlap 5419768, overlap 5419780 5419783 ATGCGCCCGACAAGA CGCGGCGCCTCG TGT CGAAGCGCCGCA ACGATCCGCTCACGC TERM 4063 5419807 - 5419783 - G 87 -19.3 -2.52623 | opp_overlap 5419768, overlap 5419782 5419780 TGCGCCCGACAAGAC GCGGCGCCTCG TGT CGAAGCGCCGC AACGATCCGCTCACG TERM 4064 5419987 - 5419955 - G 80 -14.2 -3.14132 | gap 2 TCCTGCGGCGAGCAA CAGC-GGCAGCGG-CG CAT CGACCGCCGCCTGCTG CTCCTGGTCGAGAAT Rcas_4189 5421651 - 5421031 - | helix-turn-helix domain-containing protein TERM 4065 5421598 - 5421568 - G 81 -11.8 -3.85698 | opp_overlap 5421586 CTCCTGCGCGACAAA CGCATCGAGGCTGA TGA TCTGCCCCGATTCG AGCAGTTCCTCGTAA Rcas_4190 5422310 - 5421648 - | FliA/WhiG family RNA polymerase sigma 28 subunit TERM 4066 5422748 - 5422738 - H 79 -8.2 -4.46854 | overlap 5422739 5422740 GTACCCAACAACAAA GCGG ACG CCGC ACCTGAAAAGGGGAG Rcas_4191 5422770 - 5423069 + | hypothetical protein Rcas_4192 5423511 - 5423293 - | hypothetical protein Rcas_4193 5423743 - 5424909 + | anti-sigma-factor antagonist Rcas_4194 5425194 - 5426342 + | peptidase M23B TERM 4067 5426754 - 5426723 - T 76 -13.8 -3.05715 | AACCGCCGCAGTCAA CCCGACAGGATCAC AGCA GCGATCCTGTCGAA TCAAATATCCAGATT Rcas_4195 5428716 - 5426755 - | DNA gyrase, B subunit Rcas_4196 5429843 - 5428872 - | hypothetical protein TERM 4068 5430202 - 5430234 + G 76 -8.4 -4.13728 | gap 1, overlap 5430193 GGTGCTGGCGGCATA CG-CCGCACGCCTCA GCGC TGAGGCGTCCCGACG TTTTCCGCGTATCTG TERM 4069 5431640 - 5431592 - g 80 -4.6 -4.91873 | gap 3, overlap 5431605 CAGATCAAGCAAAAA GTGCTGC-CCAAACTGCGCGGCG ATGATG CGCCGCG-ATTGCGGCGC-GCAC TGACCGAACTGCTGG Rcas_4197 5430074 - 5431810 + | ATPase Rcas_4199 5433872 - 5435227 + | adenylosuccinate lyase Rcas_4200 5435717 - 5435298 - | hypothetical protein TERM 4070 5435587 - 5435577 - G 100 -8.2 -5.31275 | overlap 5435579 TGCCAGCAGAAAAAA CGGC GTT GCCG GCAGTACCGGCAAAA Rcas_4203 5436772 - 5437263 + | CheW protein Rcas_4204 5437672 - 5438091 + | hypothetical protein TERM 4071 5439117 - 5439081 - g 78 -15.3 -2.78463 | AGCGGTCGCAGCAGA TCGGCGAGATCATCGAT CTG ATCAACGATCTCTCCGA TGAAACGCATCTGCT TERM 4072 5439159 - 5439184 + G 70 -10.3 -3.62096 | CCGCTATCGAAGCGG CCGGCGCCGGT GAAC ACGGTCGCCGG TTTGCGGTGGTGGCG Rcas_4205 5438099 - 5439640 + | methyl-accepting chemotaxis sensory transducer TERM 4073 5441243 - 5441265 + G 74 -5.4 -4.57073 | opp_overlap 5441218 GCGCCGCACTCAGAT CCGCACTATC GAG GGTCGGGCGG TTTTTCAGCACAATC Rcas_4206 5439744 - 5441969 + | CheA signal transduction histidine kinase Rcas_4207 5442041 - 5442403 + | response regulator receiver protein TERM 4074 5442498 - 5442519 + F 80 -11.5 -3.7732 | opp_overlap 5442497 GAGTTCGCACGATAC GCCGCCGGG ATCG TTCGGCGGC TTGTTGGTATGGGCA Rcas_4208 5442584 - 5443717 + | response regulator receiver modulated CheB methylesterase TERM 4075 5443759 - 5443720 - f 73 -9.8 -3.57263 | gap 1, opp_overlap 5443738, overlap 5443721 AGTTGCAGGTTGAAA GTGGAGGTAGGGGCGCGCC GCG GGCGCGCCCATCGCGCC-C GCATTGGGTGGCGCG TERM 4076 5443738 - 5443762 + F 76 -14.2 -3.05384 | opp_overlap 5443720 5443721 GAGGTAGGGGCGCGC CGCGGGCGCG CCCAT CGCGCCCGCA TTGGGTGGCGCGCGG TERM 4077 5444654 - 5444683 + G 73 -6.3 -4.3739 | ATCTCCTCGAAACGT TTCCGCCGACGGC GTAT GGCGTCGACGCAA TTTTCTGCCAGAATG Rcas_4209 5444002 - 5445510 + | TPR repeat-containing CheR-type MCP methyltransferase Rcas_4210 5445517 - 5446602 + | protein serine/threonine phosphatase TERM 4078 5446689 - 5446672 - f 73 -4.8 -4.71223 | overlap 5446673 GTAGAATACAGAAAA GCGTCA ACCAGA CGACGC ACGAGCGCCAACTGG TERM 4079 5447673 - 5447661 - g 80 -5.5 -4.77567 | AGTTGCAGAACAAAA CACGC GAG GCGTA TGACACCCTCTTCGA Rcas_4211 5446724 - 5448292 + | TPR repeat-containing protein Rcas_4212 5448314 - 5448748 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Rcas_4213 5448738 - 5449082 + | anti-sigma-factor antagonist TERM 4080 5449129 - 5449144 + T 82 -11.8 -3.89346 | opp_overlap 5449128 CTGATGTGCAGAGAT GCGGGC GAAA GCCCGC TTTCTCCCCTGCGCG Rcas_4214 5450632 - 5449502 - | hypothetical protein TERM 4081 5451118 - 5451063 - g 71 -12.6 -3.05816 | gap 3 CGACGCGCCACCGAA GCCATTGAGCGCCAGCCGCGCGCCGGG ATCGA CCGGGTGCGCG-C-GGCGATC-ATGGC GGTGATCGAGACGTT Rcas_4215 5450649 - 5451458 + | TetR family transcriptional regulator TERM 4082 5454716 - 5454685 - g 81 -15.1 -3.05816 | gap 1 CGACGCTCCACCCAA CGCCTGCGCTCGGC GGTGA GCCGCGCGC-GGCG GCGATGCGCCTGATC Rcas_4216 5453613 - 5455073 + | isochorismate synthase Rcas_4217 5455439 - 5457181 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Rcas_4218 5457280 - 5458143 + | naphthoate synthase Rcas_4219 5458140 - 5459615 + | O-succinylbenzoate-CoA ligase Rcas_4220 5460847 - 5459900 - | aminoglycoside phosphotransferase Rcas_4221 5461570 - 5461271 - | hypothetical protein Rcas_4222 5461758 - 5462687 + | ATP-dependent transcription regulator LuxR Rcas_4223 5462974 - 5463612 + | hypothetical protein TERM 4083 5463717 - 5463736 + F 71 -7.8 -4.07885 | overlap 5463718 TCGCAGTACGGCGTA GCGCGAGA TTCA TCTCGCGG TTTTAGGACGACATA TERM 4084 5463848 - 5463867 + F 71 -7.8 -4.07885 | opp_overlap 5463831, overlap 5463849 TCGCAGTACGGCGTA GCGCGAGA TTTA TCTCGCGG TTTTAGGACGACATA TERM 4085 5463980 - 5463997 + F 74 -11.3 -3.53444 | opp_overlap 5463962, overlap 5463952 CGCAGTACGGCGTAG CGCGAGA TTTA TCTCGCG TTTAGGGCGACATAA TERM 4086 5464039 - 5464014 - f 71 -8.3 -4.04206 | opp_overlap 5464014 TTAGGGCGACATAAA TGTCGCAGTAC GGTC GTACCGCGAGA TTCTCGCCCTGTACC Rcas_4224 5464244 - 5464756 + | GCN5-related N-acetyltransferase Rcas_4225 5465557 - 5464796 - | abortive infection protein Rcas_4226 5467725 - 5465677 - | integral membrane sensor signal transduction histidine kinase TERM 4087 5465762 - 5465741 - G 70 -10.1 -3.57144 | CTTTCGATGTGGAAA GCGCCGC CGATGTGC GCGGCGC GCTCAGGCATGGATT Rcas_4227 5468371 - 5467730 - | two component LuxR family transcriptional regulator TERM 4088 5468530 - 5468548 + H 77 -14.6 -2.78384 | CGCGACATTTATGTC GCACCCCA TAT TGGGGTGC TCTCGTACCGCGACA TERM 4089 5468856 - 5468874 + H 91 -13.2 -3.73072 | CGCGACATTTATGTC GCACTCCA TAT TGGAGTGC TTTCGTACCACACTT TERM 4090 5469279 - 5469297 + H 82 -12.4 -3.64682 | overlap 5469292 AATCTGCAATATGTC GCGCCCCA TAT TGGGGTGC TTTCACACTTTCGTA TERM 4091 5470134 - 5470166 + G 71 -5.4 -4.41348 | GATGAGCCGTCCAAC CGCGCCCGCGCC CGACAGATT GGCGTGGCGGCG TTTCTTTCCAAGAGC Rcas_4228 5469867 - 5470247 + | response regulator receiver protein Rcas_4229 5470244 - 5470540 + | hypothetical protein Rcas_4230 5470547 - 5471155 + | hypothetical protein Rcas_4231 5471959 - 5471339 - | hypothetical protein Rcas_4232 5472561 - 5471902 - | CRISPR-associated RAMP Cmr1 family protein Rcas_4233 5472985 - 5472683 - | hypothetical protein Rcas_4234 5473872 - 5473213 - | hypothetical protein Rcas_4235 5474733 - 5474275 - | AIG2 family protein Rcas_4236 5476025 - 5475351 - | hypothetical protein Rcas_4237 5477134 - 5476022 - | hypothetical protein Rcas_4238 5478318 - 5477491 - | hypothetical protein Rcas_4239 5478718 - 5478329 - | hypothetical protein Rcas_4240 5479694 - 5478708 - | CRISPR-associated RAMP Cmr4 family protein family protein Rcas_4241 5482494 - 5479705 - | CRISPR-associated Csx11 family protein TERM 4092 5480657 - 5480669 + g 74 -2.7 -4.84359 | GCGTTGTTCTGGTAA TCGAT TTG ATTGA TTTTTATCCCGCTAA Rcas_4242 5483810 - 5482491 - | hypothetical protein TERM 4093 5482672 - 5482682 + g 72 -4 -4.54753 | CACCACTTTTTTGCT TTGT CGT ACAA TTGTTTTTCCTGTTT TERM 4094 5483087 - 5483077 - G 74 -2.4 -4.94262 | overlap 5483079 TAGAGCAAAAAGAAA TCGC CTT GCGC GCCCTGCGGCACGCA Rcas_4243 5484511 - 5483807 - | hypothetical protein Rcas_4244 5486124 - 5484508 - | hypothetical protein Rcas_4245 5487191 - 5486121 - | CRISPR-associated RAMP Cmr1 family protein TERM 4095 5488050 - 5488027 - R 78 -15.4 -2.53263 | opp_overlap 5488006 5488020, overlap 5488043 5488044 TGCATGGTCAACGTA GCGCACGATT AATT AATCGTGCGC CACGCCATTCCATCC Rcas_4246 5489849 - 5488068 - | alpha amylase catalytic region Rcas_4247 5490298 - 5489846 - | hypothetical protein Rcas_4248 5491574 - 5490621 - | phospholipid/glycerol acyltransferase Rcas_4249 5492394 - 5491582 - | deoxyribodipyrimidine photolyase-like protein Rcas_4250 5492600 - 5492439 - | hypothetical protein Rcas_4251 5494246 - 5492720 - | deoxyribodipyrimidine photolyase-related protein TERM 4096 5493237 - 5493224 - G 77 -3.7 -4.85599 | opp_overlap 5493225, overlap 5493225 GCCACTCCAGAAAAA GCGCG GTAG CGGGC GCGTTGCATTCCAGG TERM 4097 5495469 - 5495424 - g 86 -15.3 -3.61356 | overlap 5495413 AGCAGCGACCGGAAA CGGCGTCGCTGCGCCAACCGC AGCA GCGACCGGCGCGACCACACCG GCGTAGCGGCACGAA Rcas_4252 5494738 - 5495475 + | phosphoglycerate mutase Rcas_4253 5495503 - 5496015 + | hypothetical protein TERM 4098 5496098 - 5496078 - g 71 -9.7 -3.76641 | ACGGCAAGATGGAAA TTCAGGGCA TGA TGCCCTGGA GCAGTAATTACACGC Rcas_4254 5496017 - 5496748 + | hypothetical protein TERM 4099 5498122 - 5498087 - g 79 -9 -4.2461 | gap 1, opp_overlap 5498096, overlap 5498088 ATCGGCACCAACAAA CCCGA-CGCAGCCGCCA CGG TGGCGGCTATGGTCGAA GACCTGCCGAAACTG TERM 4100 5498096 - 5498112 + G 72 -13.7 -2.78463 | opp_overlap 5498088 5498087 AACAAACCCGACGCA GCCGCCA CGG TGGCGGC TATGGTCGAAGACCT TERM 4101 5498197 - 5498158 - g 77 -3.8 -4.83615 | gap 4, opp_overlap 5498178 CATTCCCGATAAAAA CCGCGAT-C-CAG-AGCGCA TCGT TGCGCTGCTGCGCAT-GCGG AAGCCCGATTTCGTC Rcas_4255 5496935 - 5498338 + | ferredoxin--NADP(+) reductase Rcas_4256 5498615 - 5498316 - | hypothetical protein Rcas_4257 5498792 - 5499223 + | hypothetical protein Rcas_4258 5501070 - 5499337 - | ferrous iron transport B domain-containing protein TERM 4102 5500110 - 5500092 - G 74 -5.3 -4.59773 | gap 1 GTTGATGGCGAAAAA GCGTGTGC CGCA GCA-ACGC CCCCATGCCTACCGC Rcas_4259 5501600 - 5501070 - | small GTP-binding protein Rcas_4260 5501851 - 5501600 - | FeoA family protein Rcas_4261 5502092 - 5501838 - | FeoA family protein Rcas_4262 5503695 - 5502508 - | aminotransferase class V Rcas_4263 5504467 - 5503688 - | cobalt ABC transporter, ATPase subunit Rcas_4264 5505003 - 5505209 + | twin arginine-targeting protein translocase TERM 4103 5505215 - 5505203 - f 71 -7.7 -4.0492 | GAAGGCTGAGACAAA GGCAT AGC ATGCC CGTCTCGCACCTGTG TERM 4104 5505268 - 5505312 + F 100 -18.6 -3.86252 | opp_overlap 5505246 5505266 CGCGCGCAGACGAGC CGGCGCCAGTCGCAGTGTGA ATGTG TCGCTCTGTGGCTGGCGTCG TTGTGTTTGGTAAAA Rcas_4265 5505288 - 5506652 + | GTP-binding protein Obg/CgtA TERM 4105 5506764 - 5506735 - g 100 -6.3 -5.42259 | opp_overlap 5506742 5506743, overlap 5506739 5506742 CGACGGTGAAAAAAA CAACTGAGGCGAC GACC GCCGCATCCGTCG CTCGTGCTCCTTTTC TERM 4106 5506814 - 5506799 - g 81 -11.8 -3.83026 | CCGTCGTAGACGAAA CGCGCC TTCC GGCGCG CTGCTCCCCCTCTTC TERM 4107 5507304 - 5507341 + G 71 -4.9 -4.43844 | gap 2 GAGGTGATGGAGAGC CTGGTG-GCGCA-ACCC GATCTG GGGTATGCGCTCGTCGG TTTTCTCGATGATCG TERM 4108 5507774 - 5507792 + G 74 -11.7 -3.40191 | overlap 5507781 CCGGCAGCGTCGGAT CGGGCGT GATGG ACGCCCG TTCATCTGTTATAAG Rcas_4266 5506695 - 5508233 + | undecaprenyl-phosphate galactose phosphotransferase TERM 4109 5508483 - 5508497 + G 73 -7 -4.37199 | overlap 5508484 ATGCGTGTACTGATC ACCGGC GGC GCCGGC TTTCTTGGTTCTCAT TERM 4110 5508808 - 5508792 - g 100 -5 -5.42265 | GCAAAGGATAAAAAA GCGCGC TTCCT GCTCGC TTCGACTTCAGAAGT Rcas_4267 5508468 - 5509421 + | NAD-dependent epimerase/dehydratase Rcas_4268 5509423 - 5510934 + | O-antigen polymerase Rcas_4269 5510919 - 5511872 + | NAD-dependent epimerase/dehydratase Rcas_4270 5511934 - 5513046 + | hypothetical protein Rcas_4271 5513061 - 5514263 + | glycosyl transferase group 1 Rcas_4272 5514235 - 5514864 + | hypothetical protein Rcas_4273 5514957 - 5516561 + | carbohydrate kinase FGGY Rcas_4274 5517172 - 5516534 - | tetratricopeptide TPR_4 Rcas_4275 5518233 - 5517169 - | DNA polymerase III, delta prime subunit Rcas_4276 5518311 - 5518697 + | response regulator receiver protein Rcas_4277 5520161 - 5518731 - | Beta-ketoacyl synthase Rcas_4278 5521124 - 5520204 - | putative undecaprenol kinase TERM 4111 5520467 - 5520457 - G 77 -2.4 -4.9755 | AGATAGAACGAAAAA GTCG TTG CGGC GCGGCGGTCCAAGCC Rcas_4279 5521528 - 5521893 + | hypothetical protein Rcas_4280 5523033 - 5521903 - | phospholipase D/transphosphatidylase TERM 4112 5521966 - 5521999 + g 71 -5.3 -4.40993 | gap 1, opp_overlap 5521966 CTCATCCAGAAAGAG CCTGGCGATGGT-CGT GTC GTGTATGATCGCCAGG TTTTCGTCGTTTGTG TERM 4113 5522928 - 5522871 - G 77 -12.6 -3.54488 | gap 1, opp_overlap 5522889, overlap 5522869 GTGTGGTAAAGAAGA CCTGCACCTGCCGGACGATCGCA-CTG TGGTG CGGTTGCGATGGTTCGGCTGGCGCCGG GTGCGATGGGGTGTG Rcas_4281 5524408 - 5523152 - | glycosyl transferase group 1 TERM 4114 5523946 - 5523956 + g 73 -8.2 -4.08394 | opp_overlap 5523925, overlap 5523929 CGCGCAGGTCGGTGA GCGC CGC GCGC TTTTGCAGCACATAT TERM 4115 5524285 - 5524234 - G 93 -14.5 -3.9693 | CACGCACCGAAACAA CCCGACACCGATCGCGGAGC-GGCG TCAG CGCCCGTTCCGCAA-CGGCATCAGG CGCAAACGTGAGACA Rcas_4282 5524857 - 5524417 - | diacylglycerol kinase TERM 4116 5524969 - 5524940 - R 76 -14.4 -2.64472 | gap 1, overlap 5524937 5524936 CACGGCTCAAACCCA GCGCAC-CGAGGA TCGCC TCCTCGCGTGCGC GCATGTCGGCTTCAT Rcas_4283 5525396 - 5524917 - | hypothetical protein TERM 4117 5525072 - 5525046 - G 72 -3.7 -4.58786 | gap 1, overlap 5525051 ATGAACAACAAGAAA GGCAAGTTCGCG CTCA CGCGAA-TGACC GTACTCCGCTGCCTG Rcas_4284 5527609 - 5525423 - | metal dependent phosphohydrolase TERM 4118 5525871 - 5525844 - G 76 -7.6 -4.36914 | opp_overlap 5525845 5525846, overlap 5525845 5525846 TGGGTGCTGATAAAA TCGACGATCTGC GCCG GCAGACCGGCGG CAATCGCCATTTTCC Rcas_4285 5528164 - 5527643 - | GatB/YqeY domain-containing protein TERM 4119 5528022 - 5528038 + g 75 -12.3 -3.60098 | GCCGACTCGCCGCCA GCCGCAT CGA ATGCGGC TTTCACCTGCGCCAT Rcas_4286 5528828 - 5528196 - | guanylate kinase Rcas_4287 5528871 - 5530622 + | fibronectin-binding A domain-containing protein TERM 4120 5530660 - 5530640 - T 100 -15.4 -4.89852 | CGATACGCACAAAAA GCGCCCGC GTGCT GCGGGCGC CGGAGAACAACAGAA Rcas_4288 5530934 - 5530704 - | hypothetical protein Rcas_4289 5531320 - 5531583 + | hypothetical protein TERM 4121 5532952 - 5532964 + G 85 -5.5 -5.09225 | CCGATCAGTTAGGCG CCTTG AGT CAGGG TTTTTTGAGTCCGGT Rcas_4290 5531604 - 5533379 + | acetyl-CoA carboxylase, biotin carboxylase Rcas_4291 5533395 - 5534282 + | dihydrodipicolinate synthetase TERM 4122 5536236 - 5536218 - g 74 -5.2 -4.62069 | overlap 5536220 CTCGTATTCCAAAAA GCCCCG CCCCCCT CAGGGC ATGTCGTCGAGTTCA Rcas_4293 5535489 - 5537108 + | hypothetical protein Rcas_4294 5538861 - 5537644 - | glycosyl transferase group 1 TERM 4123 5538841 - 5538826 - G 100 -6.1 -5.47399 | GTAATCCGAAAAAAA GCTGG TCGACG CCAGC ATGAGAATTGTGTAA Rcas_4295 5539652 - 5538882 - | hydrolase Rcas_4296 5542390 - 5541065 - | hypothetical protein Rcas_4297 5542796 - 5544706 + | TrkA domain-containing protein TERM 4124 5544814 - 5544771 - T 95 -19.1 -3.35015 | CGAACTACCGGAGAA GCGGGAGC-GTGTGCATGACG TAAC CGCCAT-CACACTGCTCCCGC ACAATCGGTGTTCGC Rcas_4298 5545520 - 5544837 - | two component transcriptional regulator TERM 4125 5546030 - 5545988 - H 73 -9.9 -3.59979 | overlap 5545989 5545992 5546000 TTCGCTCAGGGTAAA CGCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCG-TACT GCTCGGGGTGACCAT TERM 4126 5546029 - 5545989 - H 73 -13.4 -2.75844 | overlap 5545988 5545992 5546000 TCGCTCAGGGTAAAC GCAGCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCG-TAC TGCTCGGGGTGACCA TERM 4127 5546027 - 5545992 - H 72 -14 -2.65354 | gap 1, overlap 5545989 5545988 5546000 CTCAGGGTAAACGCA GCGAGGAATCG-GCGCG GGT CGCGCACGACCCCTCGT ACTGCTCGGGGTGAC Rcas_4299 5546101 - 5547174 + | sodium/calcium exchanger membrane region Rcas_4300 5547415 - 5548524 + | phosphate binding protein TERM 4128 5548573 - 5548617 + G 88 -16.6 -3.28712 | gap 1 TCGGCGTTGACCTGA TCCTCATGCTGGTGCTGGGCA GTTT TGCCCTGCACCAG-ATGAGCA TTATGAACCAGAAAG TERM 4129 5550051 - 5550072 + G 73 -10.9 -3.64703 | gap 1, opp_overlap 5550047 CTCAGTCAACAGTTA TGTCGCCTGC TCG GC-GGCGACA TTTCGGTCACCAGCG Rcas_4301 5548521 - 5550260 + | integral membrane sensor signal transduction histidine kinase Rcas_4302 5550274 - 5550648 + | response regulator receiver protein TERM 4130 5550991 - 5551005 + G 70 -12.8 -2.88663 | CGAAAGTGGTGCTCT GCCGCG ACG CGCGGC TCTCTGGCGCTCAGT Rcas_4303 5550822 - 5552360 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 4131 5553592 - 5553607 + G 74 -2.4 -4.9218 | overlap 5553593 CATGCTGACAGCGCT GCTGGC ACTC GCCGGG TTTTTCTACTACGTC Rcas_4304 5552513 - 5554120 + | protoheme IX farnesyltransferase TERM 4132 5554202 - 5554231 + F 74 -12.9 -3.17941 | gap 1, opp_overlap 5554202, overlap 5554203 5554206 GGGCGGTGCGAACGA GCAGGCGAGGCGTC GAA GACGCCTC-CCTGG TTCCTGCCCTCTCAT TERM 4133 5554203 - 5554230 + F 78 -16.4 -2.50443 | gap 1, opp_overlap 5554202, overlap 5554202 5554206 GGCGGTGCGAACGAG CAGGCGAGGCGTC GAA GACGCCTC-CCTG GTTCCTGCCCTCTCA TERM 4134 5554206 - 5554228 + F 73 -13.4 -2.78725 | opp_overlap 5554202, overlap 5554203 5554202 GGTGCGAACGAGCAG GCGAGGCGTC GAA GACGCCTCCC TGGTTCCTGCCCTCT Rcas_4305 5554341 - 5555879 + | sulfatase Rcas_4306 5555888 - 5556760 + | prolipoprotein diacylglyceryl transferase Rcas_4307 5556845 - 5558251 + | type I phosphodiesterase/nucleotide pyrophosphatase TERM 4135 5558404 - 5558436 + G 76 -9.8 -3.85698 | gap 1, overlap 5558403 5558402 5558401 TGCGACCTCGAAGTG CTGG-CGACCGGCGG TTTT TCGCCGCTCGACCGG TTTATGGGGCGCGCC Rcas_4308 5558266 - 5559975 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein TERM 4136 5561598 - 5561623 + G 78 -14.7 -3.08679 | CGACGATGGGTTGTC CCTCGACGCCG CGCA CGCCGTCGAGG TGTTCAATGCAACCG TERM 4137 5561778 - 5561806 + G 72 -12.4 -3.36327 | gap 1 GGCATGGGTGCAGGT GCGC-GCGGGGGA ACTA TCCCCCGAAGCGC TTCTGGATGCGCTGA Rcas_4309 5561179 - 5562081 + | phosphotransferase domain-containing protein Rcas_4310 5562089 - 5563009 + | tRNA delta(2)-isopentenylpyrophosphate transferase Rcas_4312 5563960 - 5563469 - | hypothetical protein Rcas_4313 5565187 - 5563964 - | major facilitator transporter TERM 4138 5564308 - 5564275 - G 72 -7.2 -4.14392 | overlap 5564285 GCGCAACGGCGAAAA CGGCGCCAAACCGG AGCGTG CCGGCAGCGCGCCG CAATCCCATCCGCGC TERM 4139 5564342 - 5564285 - G 75 -11.8 -3.57309 | gap 1, overlap 5564275 GAAAACGGCGCCAAA CCGGAGCGTGCCGGCAGC-GCGCCG CAATCCCAT CCGCGCTGCGACCGGCGCGCCCAGG AGCGCCCCAAGCCCC Rcas_4314 5566311 - 5565199 - | glycosyl transferase group 1 TERM 4140 5565512 - 5565484 - G 85 -10.2 -4.35044 | overlap 5565485 CGACGGAAAGACAAA CGCCAGCGCCCC GTGAT AGAGCGCCGGCA GATCGTCGTCCGCCA Rcas_4315 5566412 - 5567617 + | cysteinyl-tRNA synthetase TERM 4141 5568372 - 5568345 - T 73 -9.2 -3.95448 | gap 1, overlap 5568339 ATATCAAAAGCGAAA GGTGTGCAGCCTG CAC CAT-CTGCACACC CCCTCGGCTCTGTTC Rcas_4317 5568850 - 5568428 - | ribosomal protein L7/L12 Rcas_4318 5569493 - 5568930 - | ribosomal protein L10 TERM 4142 5569347 - 5569367 + g 77 -2.5 -5.0133 | opp_overlap 5569347, overlap 5569351 CTTCGCCACCACAAA TTCCGCG CCGCTTT CGCGCAA TTTTTTACGCAGGTC TERM 4143 5569556 - 5569523 - R 100 -15.3 -5.24129 | overlap 5569543 5569555 TTCCGCCATAAAAAA CGCGGGTTGCCGCAC ACAA ACGCAGCAACCCACG AACCCATGCATCGCA Rcas_4319 5570437 - 5569715 - | ribosomal protein L1 TERM 4144 5570324 - 5570337 + g 71 -8.1 -3.90856 | opp_overlap 5570324 GACGGTTGGATCGAA CGTCG TAAA CGACG TTTCCTTCAGCAGTT Rcas_4320 5570913 - 5570488 - | ribosomal protein L11 Rcas_4321 5571517 - 5570933 - | NusG antitermination factor Rcas_4322 5571795 - 5571541 - | preprotein translocase, SecE subunit Rcas_4323 5573116 - 5571911 - | elongation factor Tu TERM 4145 5573316 - 5573263 - R 86 -12.9 -3.99229 | gap 1 ATACGAACATAAGAA TGAGAATGTAGAATTGAGAAACAA CACCGCC CTGCT-CTCAACTCTACATTCTCA GTCGAACTGGTGGGC Rcas_4324 5574496 - 5573471 - | glyoxylate reductase TERM 4146 5574472 - 5574419 - GR 72 -11.1 -3.28712 | gap 2, overlap 5574451 5574471 TTCGTCGTCCCAGAA CGTCGTCT--CGCAGGCGGCGGTCA CAATAT CAACTGCCGCCTGTGGCAGACGACG CGTGAGGTATACGCG Rcas_4325 5575061 - 5574447 - | hypothetical protein Rcas_4326 5575146 - 5576837 + | methylmalonyl-CoA mutase, large subunit TERM 4147 5577014 - 5576969 - f 73 -9.8 -3.59979 | gap 3 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGAGCG GGT CGCGCACGACCCCTCGCGCTGCG CGGGGTGACCATGCC TERM 4148 5577107 - 5577071 - f 86 -18.3 -2.88663 | opp_overlap 5577063 5577062, overlap 5577082 ATGGACCGCCAGACA CTGTTACCTAACGGTAT GGT ATACTGTTAGGTAACAG TATGCGCCATTATCG Rcas_4327 5577109 - 5580174 + | ATP-dependent transcription regulator LuxR TERM 4149 5580432 - 5580397 - f 78 -15.4 -2.65354 | gap 1, overlap 5580393 5580394 CTCAGGGTAAACTCA GCGCGGAATC-GGCGCG GGT CGCGCCAGACCCCTCGC GCTGCTCGGGGTGAC Rcas_4328 5580887 - 5582179 + | major facilitator transporter TERM 4150 5583180 - 5583155 - g 75 -3.9 -4.7497 | opp_overlap 5583177, overlap 5583156 GGTACTCACCAAAAA TCAGGCGATCA TGGT TTACCGCCTGG CGCTGGCGTATGGCG TERM 4151 5583438 - 5583411 - g 71 -9.2 -3.78329 | gap 1, overlap 5583415 5583437 CGCGAGGAACTCAAA CGCATTGCCCGCG AAG CGCAGACAAT-CG GGCAGGAAAAAGCCC TERM 4152 5583472 - 5583450 - g 78 -4.7 -4.7254 | overlap 5583437 ATCGGGCAGGAAAAA GCCCGCGAG GTGAT CGCACAGGC ACAGGACACCCGGGA Rcas_4329 5582490 - 5583656 + | hypothetical protein Rcas_4330 5583659 - 5584945 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Rcas_4331 5585401 - 5584946 - | hypothetical protein Rcas_4332 5585470 - 5585829 + | hypothetical protein Rcas_4333 5586444 - 5586746 + | hypothetical protein Rcas_4334 5588034 - 5586757 - | histidine kinase TERM 4153 5587285 - 5587308 + g 76 -9.5 -3.99324 | TTCCGTTTCCTGCTG CGCCATCGC CAGATA GCGCTGGCG TTTCTCGTCGTCGAG TERM 4154 5587862 - 5587840 - G 100 -11.9 -4.72272 | overlap 5587825 GCCGCGCAGCAAAAA CGGCGCTGC ATCGA GCCGCGCCG CAATCGTACTGAGCG Rcas_4335 5588651 - 5588040 - | phosphoribosyl-AMP cyclohydrolase Rcas_4336 5590180 - 5588663 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Rcas_4337 5590473 - 5590165 - | hypothetical protein TERM 4155 5590340 - 5590366 + g 70 -7.4 -4.05788 | gap 1, opp_overlap 5590340 5590351 5590353, overlap 5590336 TCCAACCGCGAGAGA CGTCCAGGAAA GACCGG TTTCCTGG-CG TTTCCTTTGCGCCAC TERM 4156 5590521 - 5590508 - R 75 -2.3 -5.00616 | TGTGCCGTTAAAAAA CAGGT GCGA ACCGG TCAGACGAAGGAGCA Rcas_4338 5591398 - 5590595 - | hypothetical protein Rcas_4339 5592033 - 5591458 - | hypothetical protein TERM 4157 5591752 - 5591736 - G 73 -11.5 -3.67877 | overlap 5591734 AGTCCGCAACAAACA CGACGCC ATC GGCGCCG CTCAGCACTGCGACG Rcas_4340 5592635 - 5592096 - | roadblock/LC7 family protein TERM 4158 5592135 - 5592171 + g 74 -2.7 -4.89477 | opp_overlap 5592136, overlap 5592136 CGTATCTTCCATCGA AGTGCGGAACGACGAGC CGA GCACATCGTCGCGCGCC TTTTGTTGTTCGCGC Rcas_4341 5593420 - 5593136 - | hypothetical protein TERM 4159 5593641 - 5593626 - R 75 -7.6 -4.25104 | overlap 5593629 GCTTCGCCATGAAAA TCACGT CGAA ACGTGA CGACATGTAAGGATT TERM 4160 5593714 - 5593682 - R 100 -24.3 -4.63218 | opp_overlap 5593673, overlap 5593683 CGCGCTTTAATAAAA CCTGCCCGCCAGCAT GCC ATGCTGGCGGGCAGA GGTCAGCGGTATCCT TERM 4161 5593713 - 5593683 - R 100 -25.6 -3.3761 | opp_overlap 5593673, overlap 5593682 GCGCTTTAATAAAAC CTGCCCGCCAGCAT GCC ATGCTGGCGGGCAG AGGTCAGCGGTATCC Rcas_4342 5594185 - 5593742 - | heat shock protein Hsp20 TERM 4162 5594769 - 5594726 - g 76 -13.1 -3.46509 | overlap 5594720 5594727 GCCGAAGAACATCAA CTCCTGACCGCATTCGCCG ATCAGG CGGCGATTGCGGTCTCGAA TGCACGCCTGTTCCA TERM 4163 5594768 - 5594727 - g 74 -14.4 -2.67423 | overlap 5594726 5594720 CCGAAGAACATCAAC TCCTGACCGCATTCGCCG ATCAGG CGGCGATTGCGGTCTCGA ATGCACGCCTGTTCC TERM 4164 5595101 - 5595118 + G 79 -9.1 -4.1552 | gap 1, opp_overlap 5595101, overlap 5595117 CGCTACGCAGCACAA CGCAGCCC GCA GGGC-GCG TTTCTTGGCGCCATC TERM 4165 5595814 - 5595826 + G 95 -10.5 -4.6038 | CGATAGCCGACCGGG GCGCG GGT CGCGC TTTTCGTTTACTGTG Rcas_4343 5594309 - 5595979 + | multi-sensor signal transduction histidine kinase Rcas_4344 5595993 - 5596712 + | two component transcriptional regulator Rcas_4345 5598574 - 5597810 - | chromosome segregation and condensation protein ScpA Rcas_4346 5599096 - 5598581 - | hypothetical protein Rcas_4347 5599408 - 5599127 - | transcriptional coactivator/pterin dehydratase TERM 4166 5599467 - 5599433 - R 80 -14.4 -3.0094 | opp_overlap 5599433 5599429, overlap 5599436 5599443 CCTTACGTACACACA CGATGCGAAACGATCG CTT CGATCATCTCGCATCC TCCGTTTTCAGCACA TERM 4167 5599464 - 5599436 - R 77 -14.7 -2.73275 | opp_overlap 5599433 5599429, overlap 5599433 5599443 TACGTACACACACGA TGCGAAACGATCG CTT CGATCATCTCGCA TCCTCCGTTTTCAGC TERM 4168 5599540 - 5599509 - R 82 -11.6 -3.91473 | overlap 5599499 5599511 AGAAACTCCCAGAAA CAGCACATAGCGCT CCAA AGCGCCATGCGCCA TTCACAGTATACCAG TERM 4169 5599538 - 5599511 - R 86 -14.2 -3.54022 | overlap 5599509 5599499 AAACTCCCAGAAACA GCACATAGCGCT CCAA AGCGCCATGCGC CATTCACAGTATACC TERM 4170 5599682 - 5599643 - R 86 -13.6 -3.55622 | gap 1, opp_overlap 5599636, overlap 5599645 5599647 GTCAATTGCCCCAAA CACAGCGCCCCCCTGTTGC ACA ACGACAGAGGGGCGC-ATG CATCGGAGGTCGGTT TERM 4171 5599682 - 5599645 - R 86 -14.9 -3.35522 | gap 1, opp_overlap 5599636, overlap 5599643 5599647 CAATTGCCCCAAACA CA-GCGCCCCCCTGTTGC ACA ACGACAGAGGGGCGCATG CATCGGAGGTCGGTT TERM 4172 5599679 - 5599647 - R 90 -17.7 -3.24411 | opp_overlap 5599636, overlap 5599643 5599645 ATTGCCCCAAACACA GCGCCCCCCTGTTGC ACA ACGACAGAGGGGCGC ATGCATCGGAGGTCG Rcas_4348 5600896 - 5599697 - | RpoD family RNA polymerase sigma factor TERM 4173 5601015 - 5600987 - H 72 -13.2 -2.63252 | opp_overlap 5600984 5600984, overlap 5600986 5600984 ATTTGGCAACAAGAC GGGGCTAAGAGT GAACG ACTCTAAGCCCC CAACTTCATTGCCTG TERM 4174 5601033 - 5601055 + H 84 -10.6 -4.21438 | opp_overlap 5601038 ACTTCATTGCCTGAC CAGAACGCGA GCC TGGCGTTCTG TTGTTTCTTGCGCTA TERM 4175 5601164 - 5601196 + H 74 -11.9 -3.4678 | overlap 5601165 ACGACTGTTCGCTAT GCCGGATTGACCGGT CAG GCCGGTCGAACCGGG TTCTCATCTGCGCAT TERM 4176 5601165 - 5601195 + H 78 -15.4 -2.67747 | overlap 5601164 CGACTGTTCGCTATG CCGGATTGACCGGT CAG GCCGGTCGAACCGG GTTCTCATCTGCGCA Rcas_4349 5601311 - 5602129 + | orotidine 5'-phosphate decarboxylase TERM 4177 5602625 - 5602580 - g 70 -7.5 -3.96892 | gap 1, opp_overlap 5602590 5602592, overlap 5602590 AAGTTGTACGACAAA CGCGAAGACATCGCGCGCCGTG AGG CACGCCGCACTAT-TGATCGCG CACTCAAGGAACGAG Rcas_4350 5602175 - 5602651 + | SsrA-binding protein Rcas_4351 5603394 - 5602657 - | two component transcriptional regulator TERM 4178 5604070 - 5604110 + G 70 -12.7 -2.87963 | opp_overlap 5604069, overlap 5604060 5604088 GAAGATGGCGAAATC TTGTTGCTGAACGGCGGAC GGC GTGTGTCGTTCAGTAACAG TGTGGTCATTCTCAC Rcas_4352 5603587 - 5604795 + | ATPase Rcas_4353 5605418 - 5605801 + | hypothetical protein Rcas_4354 5606880 - 5606188 - | ABC transporter related TERM 4179 5606387 - 5606429 + g 74 -12.1 -3.53091 | gap 1, opp_overlap 5606388 5606402, overlap 5606388 CGCGGGCGCGATACG AGT-GCGCGGGCAATAGCAA CCCG TTGCTGTTGCCCGCCCGACA TTTCAGCAGGACGGT TERM 4180 5606428 - 5606388 - G 71 -13.4 -2.62184 | gap 1, opp_overlap 5606387 5606388, overlap 5606402 GCGGGCGCGATACGA GT-GCGCGGGCAATAGCAA CCCG TTGCTGTTGCCCGCCCGAC ATTTCAGCAGGACGG TERM 4181 5606388 - 5606428 + g 78 -15.6 -2.71712 | gap 1, opp_overlap 5606388 5606402, overlap 5606387 GCGGGCGCGATACGA GT-GCGCGGGCAATAGCAA CCCG TTGCTGTTGCCCGCCCGAC ATTTCAGCAGGACGG TERM 4182 5606854 - 5606827 - G 74 -13.4 -2.95298 | GTTATTGACCATATA GGCGCGCGTGAC ATTG GTGACGCGCACC GCAGGGATGGGAACA Rcas_4355 5607888 - 5606899 - | AbrB family transcriptional regulator TERM 4183 5607275 - 5607254 - G 72 -2.2 -4.71828 | ACGCGATCAACAAAA CGCGCGAT GTTCGG ATCATGCG AGACGATCACGACGG TERM 4184 5607634 - 5607620 - G 74 -5.6 -4.52589 | TGCTGCCACACAAAA CCGACA TAC TGGCGG CGGTAGCGGTCGAGT Rcas_4356 5610841 - 5607920 - | hypothetical protein TERM 4185 5608736 - 5608682 - G 79 -13.4 -3.53012 | opp_overlap 5608672 GTTTTGCGCCGCAAA CGCGCTATTGACCAGCACGGCGGAAG GGT CGTCCGCCAGACGGTTCATCAGCGCG CCGAGTGACTCACCG Rcas_4357 5612587 - 5611043 - | H+transporting two-sector ATPase delta/epsilon subunit TERM 4186 5612175 - 5612203 + g 77 -13.2 -3.55622 | gap 1 TCCAGGTCGAGTTCG GCGCGGCG-GATG GCTG CATCGCGCTGCGC TTTCGAGCGGTTCAG Rcas_4358 5613929 - 5612649 - | major facilitator transporter TERM 4187 5614227 - 5614243 + G 78 -6.5 -4.56367 | TCGCGCACGCTCGAT GCGCG GACCAGA CGCGC TTTGTTTCTCAAGTG Rcas_4359 5614128 - 5615093 + | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 4188 5615221 - 5615237 + F 73 -5.1 -4.72272 | GCACGGCGGTGCGCC CGTGGAA ACG TTGCACG TTTTTGGTCACGCAA Rcas_4360 5615486 - 5616472 + | cobalamin (vitamin B12) biosynthesis CbiM protein Rcas_4361 5616477 - 5617286 + | cobalt ABC transporter, inner membrane subunit CbiQ Rcas_4362 5617680 - 5618876 + | cytochrome P450 Rcas_4363 5619583 - 5618873 - | DtxR family iron dependent repressor TERM 4189 5619780 - 5619735 - R 73 -9.8 -3.59979 | gap 3, overlap 5619736 5619739 TTCGCTCAGGGTAAA CGCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGCT CGGGGTGACCATGCC TERM 4190 5619779 - 5619736 - R 73 -13.3 -2.75844 | gap 3, overlap 5619735 5619739 TCGCTCAGGGTAAAC GCAGCGC--GGAATC-TGCGCG GGT CGCGCACGACCCCTCGCGCTGC TCGGGGTGACCATGC TERM 4191 5619774 - 5619739 - R 72 -14 -2.65354 | gap 1, overlap 5619736 5619735 CTCAGGGTAAACGCA GCGCGGAATC-TGCGCG GGT CGCGCACGACCCCTCGC GCTGCTCGGGGTGAC Rcas_4364 5620379 - 5619846 - | hypothetical protein Rcas_4365 5620792 - 5620376 - | hypothetical protein Rcas_4366 5622137 - 5621157 - | transport system permease protein Rcas_4367 5622617 - 5622258 - | antibiotic biosynthesis monooxygenase Rcas_4368 5622961 - 5622650 - | hypothetical protein Rcas_4369 5623923 - 5622958 - | cytochrome c assembly protein Rcas_4370 5624474 - 5624091 - | hypothetical protein Rcas_4371 5625568 - 5624492 - | transport system permease protein TERM 4192 5625218 - 5625187 - G 79 -10.8 -3.90241 | overlap 5625184 TACCAAGGACAATAA CTGCAACGGCGC CAAGCGCC GCGCCGCTGCTG ACGCCGATCAAGCCA Rcas_4372 5626653 - 5625565 - | periplasmic binding protein Rcas_4373 5627449 - 5626634 - | ABC transporter related TERM 4193 5627000 - 5627024 + g 86 -17.9 -2.62184 | overlap 5627002 CGCCTGCTGCACCAG GACTCGCGCGA TGC TCGCGCGGGTC TGCTCTCCACCGGAA TERM 4194 5627002 - 5627022 + g 77 -14.7 -2.85351 | overlap 5627000 CCTGCTGCACCAGGA CTCGCGCGA TGC TCGCGCGGG TCTGCTCTCCACCGG Rcas_4374 5628515 - 5627847 - | GCN5-related N-acetyltransferase TERM 4195 5628385 - 5628334 - G 73 -11.4 -3.54424 | gap 1 TCGCAGGCGGTGAAA GGTCGGATGCCAGGAGGGGCAGGTC TCA GACCTGCCCC-CCTGCCCCCCCTGC CCCTCCTGCCCCTCA TERM 4196 5628485 - 5628463 - G 87 -19.2 -2.78463 | ACCCGCGCCATCAGA GGGGCAGGTC TCA GACCTGCCCC CCTGCCCCCCCTGCC Rcas_4375 5629801 - 5628515 - | isocitrate lyase TERM 4197 5629290 - 5629266 - G 70 -9.9 -3.5594 | opp_overlap 5629260 AACTGATCCTCGAAA TGGACGCCGGC TGC GCCGGCCTCGA TCATCGCCTTCGTCA Rcas_4376 5631393 - 5629822 - | malate synthase TERM 4198 5630863 - 5630845 - G 78 -11.6 -3.78234 | overlap 5630837 ACCGAAATCGAAGAA CGCGCCGG CCA CCGGCTCG CCGTCCACATGGACA TERM 4199 5632230 - 5632260 + H 74 -11.9 -3.5394 | gap 2, overlap 5632256 CCTCCGGCAGCAGCG CGCGCGCCGGGCTGC TGC GCAGTCCG-CGC-CG TTTGAGCAGGCGTTT Rcas_4381 5634450 - 5634866 + | PilT domain-containing protein Rcas_4382 5634987 - 5635214 + | hypothetical protein Rcas_4385 5637677 - 5636811 - | formate dehydrogenase family accessory protein FdhD Rcas_4386 5640050 - 5637822 - | oxidoreductase alpha (molybdopterin) subunit TERM 4200 5637898 - 5637862 - G 75 -14.4 -2.79183 | gap 1, overlap 5637885 TGCACCGTCACGATA GCCTTGTACGCCGGCAC ACCA GAGCCGGCGT-CACGGC GATTAGGGGCGATCA TERM 4201 5639245 - 5639221 - G 76 -6.3 -4.46233 | overlap 5639222 TGAATCTGAAAGAAA CGGTCGGCAAG GCG CGTGCCGAACA ATGCGCTCTCGAAGA TERM 4202 5640381 - 5640411 + r 95 -16.2 -3.76482 | opp_overlap 5640381, overlap 5640382 TGCCGCCGAACTACA GCGGTTGCAGCGGA CGG TCTGCTGCAACCGG TTATTCGTACTATAA TERM 4203 5640411 - 5640381 - R 75 -14 -2.90075 | opp_overlap 5640381 5640382 TGCCGCCGAACTACA GCGGTTGCAGCGGA CGG TCTGCTGCAACCGG TTATTCGTACTATAA TERM 4204 5640382 - 5640410 + r 88 -19.7 -2.85407 | opp_overlap 5640381, overlap 5640381 GCCGCCGAACTACAG CGGTTGCAGCGGA CGG TCTGCTGCAACCG GTTATTCGTACTATA Rcas_4387 5640881 - 5640513 - | hypothetical protein Rcas_4388 5641039 - 5640878 - | HsdR family type I site-specific deoxyribonuclease TERM 4205 5641279 - 5641263 - g 72 -2.1 -4.72986 | opp_overlap 5641272 5641274, overlap 5641264 5641265 GACCTCGATGAAAAA CTCGCCA TTC TGGCGCC GGCGGCGCGCTTCGA Rcas_4389 5641245 - 5642426 + | radical SAM domain-containing protein Rcas_4390 5642910 - 5643989 + | heat-inducible transcription repressor HrcA Rcas_4391 5644020 - 5644634 + | GrpE protein Rcas_4392 5644627 - 5646474 + | chaperone protein DnaK TERM 4206 5646575 - 5646565 - g 90 -8.2 -4.82667 | GGACGAGATCAAAAA GGCG TTT CGCC GCCTGGCGCGGCAGT TERM 4207 5647575 - 5647599 + G 71 -12.9 -3.0119 | GTGATGAGGGTTTCT TCGGGCGCATT AAG AATGCGCTCGG TCTGTAATCTTGAGT Rcas_4393 5646494 - 5647606 + | chaperone protein DnaJ TERM 4208 5647668 - 5647685 + G 73 -8.3 -4.08945 | overlap 5647675 5647677 GGTGCGCGAGGCGTT GCGCGCC CGGC GACGCGC TTTTCAGCGCCTGCT Rcas_4394 5647624 - 5648370 + | RNA methyltransferase TERM 4209 5648631 - 5648580 - g 84 -16.4 -3.06312 | AAAGGGCGGACCGAA CCCCCGCGCGCACACCGGCGCTCC CACC GGAGGACGGACCCGCGCGCGGGAG CGGGGCGGGGGGCGA Rcas_4395 5648346 - 5648711 + | hypothetical protein Rcas_4396 5649802 - 5648846 - | integron integrase TERM 4210 5649584 - 5649560 - G 81 -9.9 -4.12532 | opp_overlap 5649563 5649566, overlap 5649522 5649519 5649566 CTCGCGATACAGAAA GAGCAAGGCGC TCA GCGCCTGGTTC TGGGTCGAAGCGGCA TERM 4211 5650329 - 5650316 - g 79 -8.1 -4.2528 | GTTGAATGCAAGAAA CTCGG CATT CCGAG TATAGGAGTCGAGGC Rcas_4397 5650058 - 5651485 + | hypothetical protein Rcas_4398 5651490 - 5652284 + | endonuclease TERM 4212 5652423 - 5652383 - f 100 -20.6 -3.69684 | gap 2 AAAGGCATCTAACAA CCGGTTGCAGCGGACGGCGC TGC GCGCCG-CCGCTG-AACCAG AGCGTTAGCCCGCTC Rcas_4399 5652461 - 5653153 + | hypothetical protein Rcas_4400 5653360 - 5653629 + | hypothetical protein TERM 4213 5654221 - 5654170 - f 83 -16.4 -3.0701 | overlap 5654160 ATAATGCGGACCGAA CCCCCGCGCGCACACCGGCACTCC CACC GGAGGACGGACCCGCGCGCGGGAG CGGGGCGGGGGTGAG Rcas_4403 5654413 - 5655054 + | metal dependent phophohydrolase TERM 4214 5655196 - 5655238 + T 88 -13.5 -3.59979 | overlap 5655197 5655199 ATGGTCACCCCGAGC AGC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGCG TTTACCCTGAGCGAA TERM 4215 5655197 - 5655237 + T 84 -17 -2.75844 | overlap 5655196 5655199 TGGTCACCCCGAGCA GC-GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGCTGC GTTTACCCTGAGCGA TERM 4216 5655199 - 5655234 + T 85 -18.4 -2.65354 | gap 1, overlap 5655197 5655196 GTCACCCCGAGCAGC GCGAGGGGTCGTGCGCG ACC CGCGCA-GATTCCTCGC TGCGTTTACCCTGAG Rcas_4404 5656294 - 5655326 - | ribokinase-like domain-containing protein TERM 4217 5655484 - 5655534 + g 83 -12.5 -3.90744 | opp_overlap 5655518 5655519 CCACCCGCTCACGCT CCGGCAGCAGGCG-CGTGATCATGG CCG CCATAAACCCGTCGCCGGC-GCCGG TTGTTTCCACCACCG TERM 4218 5655563 - 5655518 - G 83 -13.1 -3.86015 | opp_overlap 5655484 5655560, overlap 5655519 CATGGCCGCCATAAA CCCGTCGCCGGCGCCGGTTGT TTCC ACCACCGGCACGGACGGCGGC GCGAGTTCGATGCGA TERM 4219 5655562 - 5655519 - G 83 -16.6 -2.91395 | opp_overlap 5655484 5655560, overlap 5655518 ATGGCCGCCATAAAC CCGTCGCCGGCGCCGGTTGT TTCC ACCACCGGCACGGACGGCGG CGCGAGTTCGATGCG TERM 4220 5655840 - 5655871 + g 80 -14.4 -3.18264 | gap 1, opp_overlap 5655822 5655821 5655838, overlap 5655841 CGCGCGCAGGCAATC TCGAGTGCG-CGGCG CTG CGCCGACGCACACGG TTCGTCGATGAAGCC TERM 4221 5655841 - 5655870 + g 76 -15.7 -2.50816 | gap 1, opp_overlap 5655822 5655821 5655838, overlap 5655840 GCGCGCAGGCAATCT CGAGTGCG-CGGCG CTG CGCCGACGCACACG GTTCGTCGATGAAGC Rcas_4405 5657411 - 5656302 - | oxidoreductase domain-containing protein Rcas_4406 5658524 - 5657871 - | hypothetical protein Rcas_4407 5658915 - 5659508 + | signal transduction histidine kinase, LytS Rcas_4408 5659522 - 5660304 + | cobalt transport protein TERM 4222 5661849 - 5661828 - g 72 -11.6 -3.28712 | TGCCGGGCTTGACAA CGCCAGCA TCGATG TGCTGGCG CGGCTGATCGACGAT Rcas_4409 5660362 - 5662068 + | ABC transporter related Rcas_4410 5662150 - 5663232 + | TPR repeat-containing protein TERM 4223 5663711 - 5663748 + G 70 -7.5 -4.07568 | gap 1, opp_overlap 5663709 5663711 5663712 CGCGCTGACAGAACA GCGGC-GCGCGGAGGTGC TGC GCGCGATCGAGCCGCCGC TTTTGCGCCCGGCGC Rcas_4411 5663229 - 5664692 + | deoxyribodipyrimidine photo-lyase TERM 4224 5665487 - 5665511 + G 100 -12.1 -4.66318 | opp_overlap 5665486 5665487 CGAACATCGGCAAAT TCGTGCTCGCC ACC GGCGACCGCGA TTTTATTCCGCTGGT TERM 4225 5666533 - 5666509 - g 75 -12.1 -3.61517 | AGTCTGGTGGAAGAA CCGATTCTGGC AGC GCCTGAACCGG ACGATCAGATGATGA TERM 4226 5667465 - 5667442 - g 70 -10.3 -3.67597 | gap 1, overlap 5667443 GCGCCGACCGAAGAA GCGCCGC-GT CCGAC ACGGCGGCGC AAGAAAGTCGAGACG Rcas_4412 5665141 - 5667504 + | hypothetical protein TERM 4227 5667670 - 5667646 - g 75 -13.5 -3.03441 | opp_overlap 5667645 5667644 GATCACGGTTGAAGA CGCCGCATCCA TTG CGGAGGCGGCG CGTTTTGCCGCCCGT Rcas_4413 5667527 - 5668165 + | phosphoribosylanthranilate isomerase TERM 4228 5668569 - 5668579 + G 71 -8.2 -3.88498 | overlap 5668547 GCGGAACCGGTCGCT GCGC TGC GCGC TTTCCTCTCTCGGCG TERM 4229 5669445 - 5669459 + G 76 -11.4 -3.7732 | CCCGCGCAAGGTTCG CCGCCA CAT TGGCGG TTGTTGGTGTGGCGG Rcas_4414 5668170 - 5669552 + | metallophosphoesterase Rcas_4415 5669719 - 5670084 + | hypothetical protein Rcas_4416 5670214 - 5670999 + | hypothetical protein Rcas_4417 5671757 - 5672803 + | TRAP transporter solute receptor TAXI family protein TERM 4230 5672891 - 5672850 - f 100 -16.8 -4.07687 | gap 3, opp_overlap 5672887 5672889, overlap 5672852 5672855 AGCCTGTTCTGAAAA GATCATCGGGCAGGCGAAGGC AAT GCCTTCGCCTGCCCG--G-TC GCGTTCCACGCAGCG TERM 4231 5672892 - 5672852 - f 100 -19.7 -3.63744 | opp_overlap 5672887 5672889, overlap 5672850 5672855 CCTGTTCTGAAAAGA TCATCGGGCAGGCGAAGGC AAT GCCTTCGCCTGCCCGGTCG CGTTCCACGCAGCGA TERM 4232 5672889 - 5672855 - f 100 -25.8 -2.93623 | opp_overlap 5672887, overlap 5672850 5672852 GTTCTGAAAAGATCA TCGGGCAGGCGAAGGC AAT GCCTTCGCCTGCCCGG TCGCGTTCCACGCAG TERM 4233 5673365 - 5673397 + G 100 -17.1 -4.42806 | overlap 5673368 5673370 TGCCCTGGTATGATG TTGTGCTGGCAGCGC TTG GCGCTGCCAGTATGA TTTATTTGAGCCTCA TERM 4234 5673368 - 5673394 + G 93 -18.8 -3.18452 | overlap 5673365 5673370 CCTGGTATGATGTTG TGCTGGCAGCGC TTG GCGCTGCCAGTA TGATTTATTTGAGCC TERM 4235 5673370 - 5673392 + G 93 -19.2 -3.14807 | overlap 5673368 5673365 TGGTATGATGTTGTG CTGGCAGCGC TTG GCGCTGCCAG TATGATTTATTTGAG TERM 4236 5673784 - 5673822 + G 73 -3.6 -4.72272 | gap 1, opp_overlap 5673785, overlap 5673785 5673786 CTCGGCAAGTCGAAG AGCGGC-GCCGGCCCGG GACGCA CCGTGGCGGCGGCCGGG TTTTTGCTCGGCACC Rcas_4418 5673061 - 5675346 + | TRAP transporter, 4TM/12TM fusion protein TERM 4237 5675599 - 5675586 - T 70 -3.7 -4.59511 | opp_overlap 5675586 5675592 AAGAGGGTCCAAAAA CGCGG CGCA CAGCG ATGGGCTTATGTCGC Rcas_4419 5679611 - 5676480 - | excinuclease ABC, A subunit TERM 4238 5679385 - 5679395 + g 73 -3.2 -4.70659 | overlap 5679349 5679348 AACCCCTCGATGGCA TCGA CTT TCGG TTTTTCCATCTGACC TERM 4239 5679946 - 5679892 - H 86 -14.2 -3.53761 | opp_overlap 5679892, overlap 5679913 5679943 GAACTGCGGGCTAAA GCCCTCGCTGAGTTCGTGAAAGCCCC TTT GGGGCTTCAATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 4240 5679892 - 5679946 + H 74 -12 -3.53224 | opp_overlap 5679892 5679913 5679943 GAACTGCGGGCTAAA GCCCTCGCTGAGTTCGTGAAAGCCCC TTT GGGGCTTCAATGTCCTGAGCAAGGGC TTTAGCCCGCAGCTC TERM 4241 5679925 - 5679913 - H 70 -10.5 -3.54424 | opp_overlap 5679892, overlap 5679892 GCTGAGTTCGTGAAA GCCCC TTT GGGGC TTCAATGTCCTGAGC TERM 4242 5681757 - 5681740 - g 86 -8.4 -4.53607 | AAAAGGATGACAAAA CGCCTG GCAGAA CAGGCG GAACATGTTTTTTTT Rcas_4420 5680114 - 5681841 + | hypothetical protein TERM 4243 5681959 - 5681947 - T 70 -10.5 -3.54424 | opp_overlap 5681947 5681926 GCTGAGTTCGTGAAA GCCCC TTT GGGGC TTCAATGTCCTGAGC TERM 4244 5682282 - 5682272 - T 77 -3.2 -5.00616 | CTCTTTCCCAAAAAA CCAC CAT GTGA CAGCAACCGAGAGTG Rcas_4421 5683552 - 5682248 - | major facilitator transporter TERM 4245 5683031 - 5683012 - G 95 -11.4 -4.62069 | overlap 5683013 CGGCGATCGCAAAAA CGGCGCGA TAGG TCGCGCCA CTGTCGGCGGGAGCG TERM 4246 5683030 - 5683013 - G 74 -12.7 -3.3692 | overlap 5683012 GGCGATCGCAAAAAC GGCGCGA TAGG TCGCGCC ACTGTCGGCGGGAGC TERM 4247 5683310 - 5683274 - G 70 -10.1 -3.64685 | opp_overlap 5683279 5683280, overlap 5683279 5683280 AAAAGCGGCGAACAA CAGAATGCCGGCGGCAT ACA ACGCCACCGACGTTATG ATCGCAGCGCGCAAT TERM 4248 5683305 - 5683279 - G 71 -8.6 -3.83318 | opp_overlap 5683279 5683280, overlap 5683274 5683280 CGGCGAACAACAGAA TGCCGGCGGCAT ACA ACGCCACCGACG TTATGATCGCAGCGC Rcas_4422 5685646 - 5684675 - | aldo/keto reductase TERM 4249 5684932 - 5684920 - G 70 -10.5 -3.62046 | GCACCCGCTCAACAA GCGCC GGT GGCGC GTCCTGATAGGCGTA Rcas_4423 5687617 - 5686364 - | hypothetical protein Rcas_4424 5688342 - 5691509 + | transcriptional activator domain-containing protein Rcas_4426 5694242 - 5692164 - | 5-oxoprolinase (ATP-hydrolyzing) Rcas_4425 5691650 - 5692216 + | YceI family protein Rcas_4427 5696104 - 5694242 - | hypothetical protein TERM 4250 5695000 - 5694958 - G 78 -3.6 -5.08824 | gap 3 CCTGCACCGAAAAAA TACGCAGTTG-TG-G-CGGCG CACC CCCCGACTCATCAACTGCATA GGCGATAGTTGTGCC TERM 4251 5695328 - 5695295 - G 76 -10.9 -3.68024 | gap 1, overlap 5695298 GTCGGCAAGATAGAA CATCGGCGCAACCGGC GCT GCCGG-TGCGCCTGCG GGAATACGCAAAAGG TERM 4252 5695325 - 5695298 - G 71 -13.4 -2.64695 | gap 1, overlap 5695295 GGCAAGATAGAACAT CGGCGCAACCGGC GCT GCCGG-TGCGCCT GCGGGAATACGCAAA Rcas_4428 5697146 - 5696451 - | two component LuxR family transcriptional regulator TERM 4253 5696790 - 5696810 + g 100 -14.1 -4.56775 | opp_overlap 5696777 5696776 ATTGCCGCGCCGCAC CTGATGCAG CGT CTGCATCAG TTTTTCAGGAGCGAT Rcas_4429 5698790 - 5697498 - | extracellular solute-binding protein Rcas_4430 5699974 - 5699048 - | asparaginase Rcas_4431 5700858 - 5699971 - | methyltransferase type 11 TERM 4254 5700794 - 5700760 - G 78 -12.1 -3.74519 | gap 2, overlap 5700750 AACATGCCGACCAAA GGCAGTGAGCGCCACCG GAT CGGCGGCGCGC-C-GCC GTTCCAGCACACGTT Rcas_4432 5702101 - 5700842 - | Beta-ketoacyl synthase Rcas_4433 5702382 - 5702098 - | hypothetical protein Rcas_4434 5703604 - 5702579 - | alcohol dehydrogenase TERM 4255 5703659 - 5703677 + H 77 -11.8 -3.58522 | GATCCACGGCTGTTC TCGGACAT ACA ATGTCCGA TTTCGCCCTCATAAT Rcas_4435 5704362 - 5704988 + | heme exporter protein CcmA TERM 4256 5705508 - 5705550 + G 73 -12.7 -3.14132 | gap 1, overlap 5705488 5705495 GGTGCAGGTCGGCAA CCCGGGGTTGCTGG-CGGCA TTGC TGCTGGCCGGCAGCCTGGGG TTGGTGGCGGCCACC Rcas_4436 5705050 - 5705796 + | cytochrome c-type biogenesis protein CcmB Rcas_4437 5705854 - 5706861 + | cytochrome c assembly protein Rcas_4438 5706845 - 5707075 + | hypothetical protein TERM 4257 5707145 - 5707169 + G 73 -11.4 -3.65046 | GCTGTCGCCGTCAAG CCGCTGCATC TGCTC GGTGCGGCGG TTATTGCGCTGGCAA Rcas_4439 5707100 - 5707522 + | hypothetical protein TERM 4258 5709034 - 5709048 + G 73 -8.5 -3.98378 | overlap 5709021 GCGCGCTGCGCTTCC CGGCG CTCTT CGCCG TTCTTGTTGCGTGTG Rcas_4440 5707668 - 5710031 + | cytochrome c assembly protein Rcas_4441 5710033 - 5710998 + | heat shock protein DnaJ domain-containing protein Rcas_4442 5711637 - 5711107 - | PilT domain-containing protein TERM 4259 5711376 - 5711394 + g 71 -11 -3.40597 | overlap 5711379 CATTGCTCAGCATTC GAGGCGCT GCG AGCGCTTC TATTTCAATCGGCAA TERM 4260 5711379 - 5711391 + g 74 -9.1 -3.84185 | overlap 5711376 TGCTCAGCATTCGAG GCGCT GCG AGCGC TTCTATTTCAATCGG Rcas_4443 5711852 - 5711634 - | prevent-host-death family protein Rcas_4444 5712293 - 5712883 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Rcas_4445 5712968 - 5713657 + | two component transcriptional regulator Rcas_4446 5713675 - 5714856 + | gamma-glutamyl kinase TERM 4261 5715515 - 5715532 + G 74 -9.1 -3.85698 | CATTATCCCGCGCGG CGGTGCG GGGC TGCACCG TTTCTGCCGCGAGAA Rcas_4447 5714901 - 5716172 + | gamma-glutamyl phosphate reductase Rcas_4448 5717003 - 5716197 - | dihydroorotate dehydrogenase Rcas_4449 5717148 - 5718353 + | cytochrome P450 Rcas_4450 5719275 - 5718373 - | hypothetical protein TERM 4262 5718698 - 5718728 + g 72 -7.4 -4.14243 | opp_overlap 5718663, overlap 5718690 5718699 GGGTCGCGTGACGCC AGGAGCACGCTGCG CAC CTCGGCGTACTCCG TTTTGGCATCGCGTC TERM 4263 5720247 - 5720262 + G 76 -8.2 -4.11183 | overlap 5720254 TTTCGTTGAGACTGT CGCCGG CGAA CTGGCG TTCTTTATCGTCAAC TERM 4264 5720420 - 5720443 + G 72 -7.4 -4.11692 | gap 1 TCAAGGCGGTGGAGT TGTC-CCGCGC CGA GCGCGCCGACA TTTTCCGCGTCGGTC Rcas_4451 5719492 - 5721435 + | signal transduction histidine kinase Rcas_4452 5721435 - 5722556 + | peptidase M24 Rcas_4453 5722662 - 5723225 + | segregation and condensation protein B