TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.53327 %AT, 4284557 nt, 31409 terms. Intergenic: 0.588651 %AT, H2T: 478164 nt, 4392 terms; T2T: 104892 nt, 2406 terms; H2H: 194592 nt, 2933 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|90019649|ref|NC_007912.1| Saccharophagus degradans 2-40, complete genome (length 5057531) TERM 1 702 - 687 - g 70 -2.5 -5.0538 | gap 1, overlap 688 697 CTGCACGGCAAAAAA GGCAGC AAGAG GC-GCC GCGACAAAATATAGC Sde_0001 383 - 1957 + | chromosomal replication initiator protein DnaA TERM 2 2144 - 2134 - f 71 -6.8 -4.1523 | opp_overlap 2143 TTCAGGACATATAAA GGGA ACC TCCC ATGAAATTCATTGTT Sde_0002 2145 - 3248 + | DNA polymerase III subunit beta TERM 3 3246 - 3265 + F 79 -8 -4.33165 | opp_overlap 3249 ATGCCAATGCGTCTA TAACCTAT TCCG ATAGGTTA TTTTCCTCCCTTTAG TERM 4 4375 - 4360 - g 85 -6.2 -5.20534 | ACGAAGCAATAAAAA TGTTTC ACGT GAAACA AGGTGAAGTAACGGT Sde_0003 3297 - 4400 + | RecF protein TERM 5 5917 - 5904 - g 76 -4.5 -4.91712 | TTTAACCCAGAAAAA CTGCG TTAC CACAG CATTATTATCATGAC TERM 6 6064 - 6052 - g 76 -7.7 -4.3739 | CACCGCTGTATAAAA TTGCC AAA GGCAA GCAAGAGCAATACTT TERM 7 6767 - 6753 - g 72 -9.2 -3.54602 | CAAGTAACAGTAGAA GACGCC ATC GGCGCC GACCAAATCTTTACC gyrB 4437 - 6863 + | DNA gyrase subunit B TERM 8 6927 - 6903 - f 100 -8.5 -5.02502 | opp_overlap 6908, overlap 6908 TAGATGATATAAAAA CTAAAGCCCGC TAA GCGGGCTTTTT ATTGCCCCAATAAAA TERM 9 6922 - 6908 - f 100 -12.8 -4.40526 | opp_overlap 6908, overlap 6903 GATATAAAAACTAAA GCCCGC TAA GCGGGC TTTTTATTGCCCCAA TERM 10 6908 - 6922 + F 100 -12.8 -5.06414 | opp_overlap 6908 6903 GATATAAAAACTAAA GCCCGC TAA GCGGGC TTTTTATTGCCCCAA Sde_0005 7034 - 7507 + | hypothetical protein TERM 11 8351 - 8337 - g 75 -2.8 -5.16572 | overlap 8328 ATTTAACGCAAAAAA TAGCGA ACA TCGTTA AAAAAGTAAAAAGCA TERM 12 8869 - 8856 - g 78 -6.7 -4.59109 | CAGACGGGCTAAAAA CGCTA AATT TAGCG AGCTTAGAATCAATA TERM 13 9520 - 9490 - g 70 -2.5 -4.93877 | gap 1, overlap 9492 9493 9495 GCGTATTAAACAAAA CACCACGCCAAGGC ATGT ACCTAAGCG-GGTA ATAAGCGTGGTGGAT Sde_0006 7724 - 9664 + | acetoacetyl-CoA synthetase TERM 14 9661 - 9683 + F 81 -12.1 -2.53263 | ATATGAGCTGTACCG CTAGCAGGT GCAAA ACCTGCTAG TACATTAACGCTAAA Sde_0007 9715 - 10098 + | hypothetical protein TERM 15 10119 - 10136 + F 100 -9.1 -5.4251 | opp_overlap 10119 CTAAGTTTGCAAAAA GCCCGGA TTAA TTCGGGC TTTTTTATATCTAAA TERM 16 10136 - 10119 - f 79 -6.9 -4.59853 | opp_overlap 10119 CTAAGTTTGCAAAAA GCCCGGA TTAA TTCGGGC TTTTTTATATCTAAA Sde_0008 10175 - 10690 + | hypothetical protein TERM 17 10712 - 10741 + T 100 -10.1 -5.9218 | gap 1, opp_overlap 10712 CACAGCCATAAAAAA GCCCGCA-TAGG CTACATA CCTAATGCGGGC TTTTTTTGTTCTGTA TERM 18 10741 - 10712 - T 100 -10.8 -5.29782 | gap 1, opp_overlap 10712 CACAGCCATAAAAAA GCCCGCA-TAGGC TACAT ACCTAATGCGGGC TTTTTTTGTTCTGTA Sde_0009 12200 - 10761 - | PAS TERM 19 11297 - 11316 + g 71 -3.4 -4.88918 | opp_overlap 11298, overlap 11299 GCAGGTGGCTAATAA TGGCCGAC GCTT GACGGCTG TTTTCTTTAGCGTCG TERM 20 11619 - 11633 + g 78 -5.7 -4.83615 | TTGGCTGTGTTTGAT GGTGA CGGTT TCACC TTTTTCTAACACCTC Sde_0010 12669 - 12253 - | hypothetical protein Sde_0011 13394 - 12672 - | Protoheme IX farnesyltransferase TERM 21 13499 - 13469 - R 91 -7.7 -4.81082 | gap 1, opp_overlap 13469 13470 13472, overlap 13472 AATCAATCAATAAAA TA-AGTGGCAAGCC ACAG GGCCTACCACTGTA TTTACTAATTACGCT TERM 22 13495 - 13472 - R 100 -11 -4.48997 | opp_overlap 13472 13470 13469, overlap 13469 CAATCAATAAAATAA GTGGCAAGCC ACAG GGCCTACCAC TGTATTTACTAATTA Sde_0012 15580 - 13508 - | glycine--tRNA ligase TERM 23 13566 - 13586 + g 79 -8.3 -4.20768 | overlap 13567 AACAGTTCACGCAGT TTGCTTAGC AGC GCTAAGCGG TTATTTCTTACGGCT TERM 24 13567 - 13585 + g 70 -9.6 -3.11738 | overlap 13566 ACAGTTCACGCAGTT TGCTTAGC AGC GCTAAGCG GTTATTTCTTACGGC TERM 25 13697 - 13725 + g 79 -4.4 -5.10029 | opp_overlap 13705, overlap 13698 13703 13722 CTCGTAGTTGCGCTC GGCTAACAGCGG GGTAA CCGCAGTTTGCA TTTTTTGCACTTGCT glyQ 16533 - 15577 - | glycyl-tRNA synthetase subunit alpha TERM 26 17431 - 17448 + G 70 -2.5 -5.00616 | opp_overlap 17419, overlap 17433 CAATGCCCAGATATG GGCGGCG AGTT CGCAGAC TTTTTTGGCCACCCA TERM 27 17714 - 17696 - g 80 -6.6 -4.84017 | opp_overlap 17697 17712, overlap 17697 17698 AACGCTTTAGAAAAA CCCCGCCC AGT GGGCAGAA GTTTTATAAAAACAT Sde_0014 16846 - 17733 + | lipid A biosynthesis lauroyl acyltransferase TERM 28 17945 - 17931 - g 85 -6.4 -5.12707 | GCAAATGGGAAAAAA GCTTAG GCA CCAAGC CAATACATCGCTTAA Sde_0015 17798 - 18328 + | phenylacetic acid degradation-related protein Sde_0016 18822 - 19310 + | hypothetical protein Sde_0017 20776 - 19328 - | potassium uptake protein TrkH trkA 22248 - 20815 - | potassium transporter peripheral membrane component Sde_0019 23622 - 22285 - | Sun protein TERM 29 23032 - 23045 + g 75 -3.1 -5.14965 | TTCGGCCTTGTGCAG CGCTT CTAA AAGTG TTTTTTGATCGCAGT Sde_0020 24618 - 23650 - | methionyl-tRNA formyltransferase TERM 30 24678 - 24658 - R 86 -11.8 -3.01712 | CGGCTTGCGCTAACA GCGCGCCC AGTTA GAGCGCGC AGTGGAGACTGTGCG TERM 31 24712 - 24729 + r 71 -4.1 -4.76171 | overlap 24710 TAGCCGACAGATTGC GCAGC TTGGCGGT GCTGC TTTTCTAGTTTTTTG def 25214 - 24696 - | peptide deformylase Sde_0022 25495 - 26553 + | hypothetical protein TERM 32 26563 - 26606 + F 100 -21.4 -3.57144 | opp_overlap 26555 26570 26576, overlap 26564 26566 26570 26576 CCATAAGTAGTTGTC ATACAAATAAAAACGCCAGC GAAA GCTGGCGTTTTTATTTGTAC TTTAGGCGTAAAAAA TERM 33 26564 - 26605 + F 100 -24.9 -2.74144 | opp_overlap 26555 26570 26576, overlap 26563 26566 26570 26576 CATAAGTAGTTGTCA TACAAATAAAAACGCCAGC GAAA GCTGGCGTTTTTATTTGTA CTTTAGGCGTAAAAA TERM 34 26566 - 26603 + F 100 -23.1 -2.91695 | opp_overlap 26555 26570 26576, overlap 26564 26563 26570 26576 TAAGTAGTTGTCATA CAAATAAAAACGCCAGC GAAA GCTGGCGTTTTTATTTG TACTTTAGGCGTAAA TERM 35 26599 - 26570 - f 100 -18.1 -4.0371 | opp_overlap 26566 26564 26563 26570 26576, overlap 26555 26576 TAGTTGTCATACAAA TAAAAACGCCAGC GAAA GCTGGCGTTTTTA TTTGTACTTTAGGCG TERM 36 26570 - 26599 + F 100 -18.1 -4.13654 | opp_overlap 26555 26570 26576, overlap 26566 26564 26563 26576 TAGTTGTCATACAAA TAAAAACGCCAGC GAAA GCTGGCGTTTTTA TTTGTACTTTAGGCG TERM 37 26593 - 26576 - f 100 -12.7 -5.42975 | opp_overlap 26570 26566 26564 26563 26576, overlap 26570 TCATACAAATAAAAA CGCCAGC GAAA GCTGGCG TTTTTATTTGTACTT TERM 38 26576 - 26593 + F 100 -12.7 -5.4182 | opp_overlap 26576 26570, overlap 26570 26566 26564 26563 TCATACAAATAAAAA CGCCAGC GAAA GCTGGCG TTTTTATTTGTACTT TERM 39 27154 - 27173 + G 71 -7.2 -4.19238 | overlap 27155 GCTCAGGCCTTTGGC TCCGATTT GGCA AAATCGGG TTTTACCATTACCAG TERM 40 27625 - 27638 + G 79 -8.1 -4.27007 | CTAGGCGGCTTCTTA TCGCG CCAG CGCGA TTTATTAGATATTTA Sde_0023 26674 - 27873 + | filamentous haemagglutinin-like TERM 41 28409 - 28428 + G 79 -11.4 -3.30124 | opp_overlap 28405 GCTTGAAGCCAGCTG GCCGGGTG CCAA CACCTGGC TTATACCGCATAAAG TERM 42 28457 - 28443 - g 74 -8.5 -3.91144 | opp_overlap 28442 CTTATACCGCATAAA GGGCG CGTAT CGCCC ATGGTTACAGGCAAG Sde_0024 28140 - 28715 + | translation factor SUA5 TERM 43 29297 - 29313 + G 70 -2.1 -5.04249 | opp_overlap 29285, overlap 29297 AAACACCGCGATGAG CCGCGCG GTG TGGGTGG TTTATTTTTTGACGA Sde_0025 28757 - 29668 + | coproporphyrinogen III oxidase Sde_0026 29694 - 30530 + | shikimate dehydrogenase TERM 44 30546 - 30585 + F 84 -11.4 -3.11178 | gap 1, overlap 30539 ACGGCGGCTGGTGGA CCCATCGCTACGCGCGCGA CTT TTGCGCGCTGAGTG-TGGG TGTTGCCATTGGTTG Sde_0027 30581 - 31798 + | hypothetical protein TERM 45 32373 - 32383 + G 79 -3.2 -5.33866 | AATTACTGTATTTGA TGGC GGG GCTA TTTTTTGTGAGTTTA Sde_0028 31895 - 32539 + | hypothetical protein Sde_0029 33349 - 32579 - | regulatory protein, LuxR TERM 46 32662 - 32646 - G 73 -7.9 -4.09739 | opp_overlap 32637 TTAACCTCGTCAAAA CCCGTAC TCT GTGCGGG TGCTGCGGTATCGTG TERM 47 32792 - 32809 + g 76 -4.9 -4.80882 | CAATTTTACGTTTAA GCTTTTT TCGT AAAAGGC TTTTTGCTCTAGAAT TERM 48 32892 - 32904 + g 76 -4.9 -4.86385 | overlap 32886 TGTTCGAAGCGCGTA TTAAC GAC GTTAA TTTCTTTTTGCGCAT Sde_0030 33964 - 33407 - | anhydrase family 3 protein TERM 49 34513 - 34503 - g 77 -6.8 -4.44974 | opp_overlap 34502 34503, overlap 34505 GCAAACTGTAGAAAA TGCG CTG CGCA ATTTTCGCTTAGCGG TERM 50 35379 - 35368 - g 87 -7.2 -5.24129 | GCCCGCGAGAAAAAA CGCG GTGG CGCG TGGATGGCCGATGGC Sde_0031 34108 - 36165 + | oligopeptidase A Sde_0032 36162 - 36398 + | hypothetical protein Sde_0033 37093 - 36416 - | hypothetical protein Sde_0034 37816 - 40122 + | hypothetical protein TERM 51 40182 - 40159 - T 79 -8.2 -4.21607 | opp_overlap 40159, overlap 40155 GGTAGGTAATATAAA CCTCGTTTAA CACA TTAAGCGAGG TTGTTTTGAGGGATT TERM 52 40159 - 40182 + T 91 -10.4 -4.18164 | opp_overlap 40155 40159 GGTAGGTAATATAAA CCTCGTTTAA CACA TTAAGCGAGG TTGTTTTGAGGGATT TERM 53 40225 - 40257 + T 87 -8.6 -4.56775 | gap 1, opp_overlap 40229, overlap 40226 40229 40231 TAAACGAAGGAATGT TA-AAGAGGGGTTGA TTGT TCAACCCCTCTACTA TTTTTGCGAAGAACT TERM 54 40226 - 40255 + T 81 -9.3 -3.90048 | opp_overlap 40229, overlap 40225 40229 40231 AAACGAAGGAATGTT AAAGAGGGGTTGA TTGT TCAACCCCTCTAC TATTTTTGCGAAGAA TERM 55 40229 - 40252 + T 100 -15.4 -3.01831 | opp_overlap 40229, overlap 40226 40225 40231 CGAAGGAATGTTAAA GAGGGGTTGA TTGT TCAACCCCTC TACTATTTTTGCGAA TERM 56 40252 - 40229 - T 100 -15.4 -3.69434 | opp_overlap 40226 40225 40229 40231 CGAAGGAATGTTAAA GAGGGGTTGA TTGT TCAACCCCTC TACTATTTTTGCGAA TERM 57 40231 - 40250 + T 86 -12.2 -3.05832 | opp_overlap 40229, overlap 40229 40226 40225 AAGGAATGTTAAAGA GGGGTTGA TTGT TCAACCCC TCTACTATTTTTGCG Sde_0035 41910 - 40360 - | DNA-damage-inducible protein F TERM 58 40554 - 40568 + g 72 -4.9 -4.56597 | opp_overlap 40530, overlap 40554 40555 CTGCAAGCATCCAAT TGCGC AGCGC GCGCG TTTTTCCCGCACCAA TERM 59 41955 - 41968 + H 100 -6.7 -5.60993 | opp_overlap 41955 TTGGCGGGTACTGAA TAGGC TTGC GCCTA TTTTTTTGTGCGCCA Sde_0036 42043 - 43179 + | cytochrome c oxidase, subunit II TERM 60 43626 - 43636 + G 74 -6.8 -4.21773 | CTACCTATGCCCCAG CGTC GGT GACG TTCTTTATCTTCGCC TERM 61 44656 - 44645 - g 74 -3.6 -5.03715 | ATTAGCGGCAAAAAA GCGA CCGA CCGC GTATGGGAAGGTTCG Sde_0037 43193 - 44743 + | cytochrome-c oxidase TERM 62 44838 - 44852 + G 72 -8.6 -3.71517 | AGGCAGTCACACTCA CCAGTT TTA AACTGG TTATCTTCGCTATTG Sde_0038 44801 - 45424 + | cytochrome C oxidase assembly protein Sde_0039 45455 - 46369 + | cytochrome c oxidase, subunit III TERM 63 46386 - 46418 + T 91 -12.8 -2.6342 | overlap 46384 46381 AGGCTAGTTTGATTC CTGTGGGGTTATGC GTTCG GCGTAATCCCACGG TGCCTTACTTTGAAG Sde_0040 46622 - 46374 - | DNA polymerase A TERM 64 46998 - 46986 - g 100 -6.3 -6.08563 | AACAGATAAAAAAAA CACTA CCA TAGTG CCCGTTAATTTGGGC Sde_0041 46651 - 47418 + | hypothetical protein TERM 65 47436 - 47424 - f 73 -2.7 -5.09245 | overlap 47416 47415 TGAAAACTAGAAAAA GTTCT AAA AAAAC ATAAAAAACTAACGC TERM 66 47867 - 47856 - g 70 -2.2 -5.00616 | GTTTGGGTGAAAAAA GCAC CCGA GTAC AGCGAATTGCTGTTA Sde_0042 47519 - 48145 + | hypothetical protein Sde_0043 48155 - 49339 + | putative cytochrome oxidase assembly protein Sde_0044 49405 - 50316 + | protoheme IX farnesyltransferase Sde_0045 50319 - 50978 + | GGDEF TERM 67 51674 - 51689 + G 76 -7.5 -4.20918 | TATCGGGTTTTGTAA GCGCG CCGAAT CGCGC TTTATTGCGATTGGC Sde_0046 51406 - 52116 + | hypothetical protein TERM 68 52402 - 52420 + G 73 -11 -2.52464 | overlap 52402 TATTGCGGGGGAGTG GGCTGGGT TTA ACCCAGTC TGGCTTAAACACAGA Sde_0047 52190 - 52639 + | response regulator receiver domain-containing protein Sde_0048 52828 - 53202 + | methyl-accepting chemotaxis sensory transducer Sde_0049 53230 - 53724 + | hypothetical protein Sde_0050 53749 - 55335 + | hypothetical protein TERM 69 55403 - 55361 - T 81 -10.8 -3.39018 | opp_overlap 55363 55370, overlap 55359 55362 55370 CTAGTAGCTGAAATA CCTCTATAAGTCAGCTGACA TTG TGTTAGCTGACTTATAAATA GCTTAGGTAATAGGC TERM 70 55402 - 55362 - T 83 -12.1 -2.63089 | opp_overlap 55363 55370, overlap 55361 55359 55370 TAGTAGCTGAAATAC CTCTATAAGTCAGCTGACA TTG TGTTAGCTGACTTATAAAT AGCTTAGGTAATAGG TERM 71 55363 - 55401 + T 100 -15.6 -2.55544 | opp_overlap 55362 55361 55359 55370, overlap 55370 AGTAGCTGAAATACC TCTATAAGTCAGCTGACA TTG TGTTAGCTGACTTATAAA TAGCTTAGGTAATAG TERM 72 55370 - 55394 + T 100 -13.7 -3.3785 | opp_overlap 55362 55361 55359 55370, overlap 55363 GAAATACCTCTATAA GTCAGCTGACA TTG TGTTAGCTGAC TTATAAATAGCTTAG TERM 73 55394 - 55370 - T 86 -11.5 -3.34029 | opp_overlap 55370 55363, overlap 55362 55361 55359 GAAATACCTCTATAA GTCAGCTGACA TTG TGTTAGCTGAC TTATAAATAGCTTAG Sde_0051 56280 - 55438 - | periplasmic nitrate reductase, large subunit Sde_0052 57422 - 56292 - | alcohol dehydrogenase class III Sde_0053 57877 - 58857 + | phospholipase/lecithinase/hemolysin-like Sde_0054 59302 - 60915 + | adenylyl cyclase class-3/4/guanylyl cyclase TERM 74 62050 - 62060 + G 72 -8.2 -3.73775 | opp_overlap 62050 62049 ACACCTTTGGCAAAG GGCG CAT CGCC TTTGGTGCCAGTGCA TERM 75 62374 - 62396 + G 81 -4.8 -5.26875 | opp_overlap 62357, overlap 62362 AATTGGCCGAGCAGC CATTTAGCGC GGC GCCCTATATG TTTTTTGATTCCGGA Sde_0055 60987 - 62588 + | hemolysin activation/secretion protein-like TERM 76 62724 - 62737 + G 74 -8.1 -3.8591 | opp_overlap 62724 TAATATTCAGCAAAA CAGCG AACG CGCTG TTATTAATTATCAAA TERM 77 62737 - 62724 - g 79 -8.1 -4.30809 | opp_overlap 62724 TAATATTCAGCAAAA CAGCG AACG CGCTG TTATTAATTATCAAA TERM 78 67788 - 67761 - g 83 -9.8 -4.11501 | opp_overlap 67781, overlap 67763 67779 CGAAACAGAATTAAA CAGCGCCGCCAT TACA ATGGCTGCGCCA GGCCCTGTGCGGTTA TERM 79 67786 - 67763 - g 88 -12.4 -3.63608 | opp_overlap 67781, overlap 67761 67779 AAACAGAATTAAACA GCGCCGCCAT TACA ATGGCTGCGC CAGGCCCTGTGCGGT TERM 80 70685 - 70669 - g 71 -10.8 -2.63596 | opp_overlap 70664 TCCCATTGGACAGTA GGCGGC CAGCT GCCGCC AAAAGTAATTCGCTA Sde_0056 62662 - 70701 + | hypothetical protein Sde_0057 71527 - 70739 - | zinc transport system permease protein TERM 81 71131 - 71102 - G 76 -2.1 -5.40072 | gap 1, opp_overlap 71130, overlap 71107 71123 GCTTCGCCAAAAAAA GCACACCAGCCCTA AAA TAACGCTGGC-CGC CGCACACACTACGGC Sde_0058 72305 - 71520 - | ABC-type Mn/Zn transport systems, ATPase component Sde_0059 72793 - 72305 - | zinc uptake regulation protein, putative TERM 82 72470 - 72458 - G 72 -5.5 -4.41616 | opp_overlap 72458 AGTGCCGCAAATAAA CAGCG CTT CACTG TCTTTTTGAGTTGGG Sde_0060 72902 - 73882 + | XRE family transcriptional regulator TERM 83 75026 - 75038 + G 74 -3.3 -4.93318 | opp_overlap 75022 75019, overlap 75023 TTGCTAAACGACGGC GAGGC CAC GCCTA TTTTTGTGGGTTCTA Sde_0061 73913 - 75874 + | prolyl oligopeptidase family protein TERM 84 75902 - 75890 - T 100 -10.5 -4.57073 | opp_overlap 75890 CATTCTCCCCAAAAA GCGGC TAA GCCGC TTTTTTTATGCCTGT TERM 85 75890 - 75902 + T 100 -10.5 -5.65177 | opp_overlap 75890 CATTCTCCCCAAAAA GCGGC TAA GCCGC TTTTTTTATGCCTGT Sde_0062 77053 - 75944 - | response regulator receiver domain-containing protein TERM 86 76284 - 76299 + g 71 -10.4 -2.62263 | TAACGCACATCGCCT GCCTGC GTGA GCAGGC TAGTATCGAGCGAAT Sde_0063 77167 - 78501 + | hypothetical protein TERM 87 78528 - 78541 + F 100 -9.5 -5.75342 | ACCCTGTGAGTTGAA CGCCC TTCG GGGCG TTTTTTTTCGCCCGC Sde_0064 78862 - 80547 + | putative secreted beta-mannosidase TERM 88 80575 - 80563 - T 76 -6.9 -4.5442 | opp_overlap 80571, overlap 80571 GCGTTAATCACAAAA GGCAC ATA GCGCC CCTCGGGGCGCTTTT TERM 89 80571 - 80586 + T 100 -11.8 -5.31519 | opp_overlap 80563 80571 CACAAAAGGCACATA GCGCCC CTCG GGGCGC TTTTTATTTAACTAT TERM 90 80586 - 80571 - T 86 -11.8 -3.01857 | opp_overlap 80571, overlap 80563 CACAAAAGGCACATA GCGCCC CTCG GGGCGC TTTTTATTTAACTAT Sde_0065 81997 - 80594 - | NhaD family Na(+)/H(+) antiporter TERM 91 80721 - 80688 - G 73 -2.1 -5.14894 | overlap 80690 AAAAAAGTATAAAAA CCGCGGGCTTGGCCC ATAA GTGCCACTCCTGCCG CAGAGCCAATAGATA TERM 92 81631 - 81650 + g 79 -9.2 -4.07124 | opp_overlap 81631 GCAGGCTATCGAAAA CGCCACGC TCTA GCATGGCG TTTATATAGGTCATG TERM 93 81650 - 81631 - G 89 -11.4 -4.1899 | opp_overlap 81631 GCAGGCTATCGAAAA CGCCACGC TCTA GCATGGCG TTTATATAGGTCATG TERM 94 81700 - 81683 - G 77 -3.5 -5.15167 | gap 1 CACGAGTAAGAAAAA GAATA-GC TCG GCGTATTC TAAAAAGTTATGGCG Sde_0066 82945 - 82187 - | putative ribonuclease HI TERM 95 82816 - 82806 - G 74 -6.8 -4.30576 | opp_overlap 82801 CCTTTACCACCAAAA GCAG CCT CTGC TTCGGCTTTAGTAGG TERM 96 83501 - 83530 + r 100 -15.9 -2.76046 | overlap 83506 GGCCGTTTCTTTAAG TGTAAGCGTGTGG TTAA CTACACGCTTACA TAGTGTTCACGTTAA TERM 97 83506 - 83525 + r 74 -10 -3.13432 | overlap 83501 TTTCTTTAAGTGTAA GCGTGTGG TTAA CTACACGC TTACATAGTGTTCAC Sde_0067 84031 - 83615 - | hypothetical protein Sde_0068 84125 - 84706 + | TetR family transcriptional regulator Sde_0069 85274 - 84894 - | hypothetical protein TERM 98 85357 - 85346 - R 70 -5.8 -4.3739 | opp_overlap 85346, overlap 85347 CACGCTTCCATAAAA GCTC CGCC GAGC CGCCTTTCGCGCCGC Sde_0070 89135 - 85323 - | hypothetical protein TERM 99 87053 - 87071 + g 70 -8.8 -3.41978 | GCCAGCCGTAGGGCG CTACCAGC GCT GCGGGTAG TTGGTTCGCTTGTAA TERM 100 87845 - 87860 + g 79 -4.6 -5.1417 | overlap 87847 TTGTTTTTAGCGCAA GCGAGC TAAT GCTCAC TTTTTGCTTTTCTAC Sde_0071 90976 - 89135 - | Outer membrane protein/protective antigen OMA87-like TERM 101 90216 - 90198 - G 78 -11.8 -2.99951 | opp_overlap 90196 90195, overlap 90200 CTAACCAGTAAATTA GATTGCAG TAG CTGCAATC GCGTTTCATCAACCT TERM 102 90719 - 90732 + g 73 -2.3 -5.10154 | TTCTTTTACGCGACG CCTTG CCGG CATGG TTTTTAATTTTGGCT Sde_0072 91608 - 91315 - | histidine kinase, HAMP region TERM 103 92622 - 92602 - g 70 -9.7 -3.04248 | opp_overlap 92601 TAACACTTGTGAACA CCATGACCG AAA CCGTCATGG ATATTGCCGGTGTTA Sde_0073 92145 - 94925 + | DNA polymerase I TERM 104 94984 - 94957 - T 100 -14.2 -4.67011 | gap 1, opp_overlap 94957 AATTTGACGTAAAAA GGCGGGCT-GCAC CAA GTGCTAACCCGCC TTTTTATATGGCTAA TERM 105 94957 - 94984 + T 100 -12 -4.99035 | gap 1, opp_overlap 94957 AATTTGACGTAAAAA GGCGGGCT-GCAC CAA GTGCTAACCCGCC TTTTTATATGGCTAA Sde_0074 95568 - 95014 - | hypothetical protein TERM 106 95951 - 95978 + r 100 -10.6 -6.02914 | gap 1, opp_overlap 95949 AAGCAATAGCAATCT CCCCGGATGCG TCCCCAT CGCA-CCGGGG TTTTTTTTGTCTGCA TERM 107 96140 - 96171 + r 100 -6.5 -5.59502 | overlap 96141 GAAGCCTAGGCATTG ACCCCGATGGTGT ACCCCA AGGCCATCGGGGC TTTTTTGGTTTTTTG TERM 108 96141 - 96170 + r 86 -10 -3.92041 | overlap 96140 AAGCCTAGGCATTGA CCCCGATGGTGT ACCCCA AGGCCATCGGGG CTTTTTTGGTTTTTT Sde_0075 96830 - 96189 - | cell division checkpoint GTPase YihA TERM 109 97396 - 97382 - g 83 -9.2 -4.27316 | opp_overlap 97381 GGCGCCAACCCAAAA GCCGCG AGC CGCAGC ATTCCTGAAATGACA Sde_0076 97133 - 97816 + | cytochrome c4 precursor TERM 110 97839 - 97869 + F 93 -12.7 -2.94912 | opp_overlap 97845, overlap 97845 CTAGTTTAGTTGAAT AAAAAACACCCGC TAACT GCGGGTGTTTTTG TATCTGCCTTCGCAA TERM 111 97845 - 97863 + F 100 -11.7 -5.04597 | opp_overlap 97845, overlap 97839 TAGTTGAATAAAAAA CACCCGC TAACT GCGGGTG TTTTTGTATCTGCCT TERM 112 97863 - 97845 - f 100 -11.7 -5.46657 | opp_overlap 97845 97839 TAGTTGAATAAAAAA CACCCGC TAACT GCGGGTG TTTTTGTATCTGCCT Sde_0077 98054 - 98935 + | hypothetical protein TERM 113 98947 - 98974 + F 100 -14.2 -3.86252 | GTAATACCTCCTCTA TCGCCGATGTGA GTAT TCACTTCGGCGA TTCTCTTTGCTCGGC Sde_0078 99134 - 100831 + | GGDEF domain-containing protein Sde_0079 100894 - 101670 + | cellulose binding, type IV Sde_0080 102109 - 101735 - | response regulator receiver domain-containing protein Sde_0081 103780 - 102146 - | putative methyl-accepting chemotaxis sensory transducer TERM 114 103215 - 103234 + g 75 -10 -3.48105 | gap 1, overlap 103213 ATCATTTTAATTTGG GCAGCC-GC AGC GCTGGCTGC TATTTCATCGCTTAA TERM 115 104021 - 104006 - g 81 -8.2 -4.431 | opp_overlap 104006 104005 CATGCAGGTAGAAAA GCGCCA AGAG CGGCGC ATGTTTATGTTTATC Sde_0082 103914 - 104135 + | hypothetical protein Sde_0083 104132 - 104416 + | hypothetical protein TERM 116 105214 - 105227 + G 78 -6.7 -4.63932 | ACGCCACAATCCGAT TTGGC AATT GCCAA TTTTATTGCCAACTA TERM 117 105668 - 105689 + G 72 -5.2 -4.62336 | gap 1 AGCCTTCTGCTTGTG GTACCGCAC GCGAA GTG-GGTAC TTTTTCGCATCGGCT TERM 118 105788 - 105758 - g 81 -3.3 -5.28176 | gap 1, opp_overlap 105764, overlap 105760 105761 105765 CCTACGCAGAAAAAA TATGGAA-GCTACC AGAA GGTAGCATTCCTGA AAAAGTTGGTGCGCA TERM 119 105780 - 105765 - g 70 -9 -3.37016 | opp_overlap 105764, overlap 105761 105760 105758 AGAAAAAATATGGAA GCTACC AGAA GGTAGC ATTCCTGAAAAAGTT Sde_0084 104416 - 106911 + | nitrate reductase Sde_0085 106915 - 107433 + | periplasmic nitrate reductase subunit NapB Sde_0086 107529 - 108044 + | periplasmic nitrate reductase subunit NapC TERM 120 108630 - 108648 + G 71 -10.2 -2.60244 | overlap 108626 ATGCCCGCCTTATTA GCACCTCG TTT CGCGGTGC TACCTTAATTAAAAA Sde_0087 108353 - 110155 + | hypothetical protein Sde_0088 110867 - 110214 - | hypothetical protein TERM 121 110627 - 110639 + g 75 -6.3 -4.42062 | overlap 110617 110621 TATGCCCAAGTGCCA TGGTT TGG AACCA TTTATTTGCCGCATC Sde_0089 111021 - 111425 + | vault protein inter-alpha-trypsin Sde_0090 111986 - 111429 - | peptidase C60, sortase A and B TERM 122 111826 - 111850 + g 72 -8.5 -3.71917 | opp_overlap 111815 111813, overlap 111828 ACCACCACCAAGCCC TGCTCGCCGGT TAG GCTGGCGAGTG TTTGCGGTTTACCCT TERM 123 111828 - 111848 + g 79 -11.1 -3.43919 | opp_overlap 111815 111813, overlap 111826 CACCACCAAGCCCTG CTCGCCGGT TAG GCTGGCGAG TGTTTGCGGTTTACC Sde_0091 112779 - 112021 - | putative serine dehydrogenase Sde_0092 114137 - 112839 - | hypothetical protein Sde_0093 114499 - 114131 - | hypothetical protein Sde_0094 115042 - 114662 - | hypothetical protein TERM 124 114894 - 114884 - G 80 -5.4 -5.06451 | TAGCAGGGTAAAAAA CAGA ATA TCTG CCCATACCAGCATGA Sde_0095 115595 - 115035 - | sigma-24 (FecI-like) TERM 125 115394 - 115404 + g 93 -6.8 -5.72254 | CGGCCGGGTCCTGTA GCTG CAT CAGC TTTTTTGTTATTTGC Sde_0096 115723 - 117177 + | ferrochelatase TERM 126 117540 - 117530 - g 82 -6.8 -4.90906 | overlap 117532 GCAGAATACGAAAAA TCGC TGC GCGA AGGGCAGGTAGATGA TERM 127 118179 - 118169 - g 76 -4.6 -5.00616 | CCCGCTGCCAAAAAA GCCG TAG CAGC TAAAACACCAGCAAA TERM 128 118254 - 118244 - g 80 -5.4 -5.02074 | overlap 118249 GCACCTGCTAAAAAA GCAA TGG TTGC CAAACCCGCGGCTAA TERM 129 118359 - 118349 - g 83 -4.6 -5.42259 | overlap 118350 GCACCCGCAAAAAAA GCCA CAA CGGC TAAAGCTGCGGTAAA Sde_0097 117170 - 118528 + | hypothetical protein TERM 130 119106 - 119089 - g 83 -4 -5.31275 | opp_overlap 119089, overlap 119091 GTGTACGACAAAAAA GGGGCG TACCTG CGCCGC TTATACGGTGCACTG TERM 131 120100 - 120090 - g 80 -5.4 -4.98531 | GCTTGAAAGTAAAAA GGTA AGT TACC CCGCCTATGTCGAAA TERM 132 120152 - 120139 - g 84 -8.1 -4.57482 | opp_overlap 120142 120144, overlap 120141 GCAGCTATAAATAAA GCCTG CCCG CAGGC CGAAGCGCGGGTATT TERM 133 120922 - 120907 - g 88 -6 -5.45802 | overlap 120909 CGCTTAAAAGAAAAA GCGCGC CAGT GCGAGC GCAAAGTAAAAGATT TERM 134 121504 - 121517 + G 70 -2.3 -5.00884 | TGGGTACCCGAATTT CGCGA CTAT TGGCG TTTTTTCAAAGAAGT Sde_0098 118528 - 122172 + | hypothetical protein TERM 135 122340 - 122379 + G 77 -11.7 -2.91383 | gap 1, opp_overlap 122371, overlap 122314 122313 122311 GATTACCCAATCGCG TGCTCGACCGCTTTTTAA CTAAA TTAGAAAGCGGTC-AGCG TCTGTCCATGCGAGT Sde_0099 122243 - 123493 + | hypothetical protein Sde_0100 125356 - 123824 - | deacylase-like TERM 136 125040 - 125056 + g 72 -2.9 -5.08824 | TCGGTAACATCTTTT GGCGC AGGTTTA GCGTC TTTTTTGGCTGCGGG TERM 137 125549 - 125565 + r 72 -9.5 -3.14527 | opp_overlap 125547 125546, overlap 125547 125546 ATTTATTACAAATGC CATTAGC ATG GCTAATG TATTCGTAAGCATTA Sde_0101 126057 - 125617 - | BadM/Rrf2 family transcriptional regulator TERM 138 125925 - 125941 + g 100 -10.9 -4.74453 | TATTTAGCTCTTGTA CCACCTT CAT AAGGTGG TTTTTAGATATATTG TERM 139 126112 - 126086 - R 100 -8.8 -5.02074 | opp_overlap 126086 CGATGTGTTAAAAAA GCTAGTAATTAG CGG CTAACAACTAGC TTTTAGCGATTGATA TERM 140 126086 - 126112 + r 71 -6.6 -4.15106 | opp_overlap 126086 CGATGTGTTAAAAAA GCTAGTAATTAG CGG CTAACAACTAGC TTTTAGCGATTGATA Sde_0102 127385 - 126129 - | putative uncharacterized protein involved in response to NO TERM 141 127172 - 127156 - G 79 -4.3 -5.26875 | GCCGTAAGTAAAAAA CCCGCAA TTG CCGCAGG TACAAGGCCGTATAG TERM 142 127319 - 127309 - G 79 -4.6 -5.11254 | AATAACAAAAAGAAA GGCC GAA AGCC GTGCGCAAATAGCTG TERM 143 127455 - 127406 - H 100 -11.2 -4.26076 | gap 1, opp_overlap 127413 127430 127433 127435 127454, overlap 127409 127411 GCACCTGCATTAAAA CAACACATCTTTATAAGATACAT TTATT ATGCATCTTATAAAGATGCAT-G TATATTACATCTTAA TERM 144 127453 - 127409 - H 100 -14 -4.25256 | opp_overlap 127413 127430 127433 127435, overlap 127406 127411 CCTGCATTAAAACAA CACATCTTTATAAGATACAT TTATT ATGCATCTTATAAAGATGCA TGTATATTACATCTT TERM 145 127451 - 127411 - H 100 -16.6 -3.72481 | opp_overlap 127413 127430 127433 127435, overlap 127409 127406 TGCATTAAAACAACA CATCTTTATAAGATACAT TTATT ATGCATCTTATAAAGATG CATGTATATTACATC TERM 146 127433 - 127455 + H 74 -10 -3.136 | opp_overlap 127411 127409 127406, overlap 127430 127435 127454 ATAAGATACATTTAT TATGCATCTT ATA AAGATGCATG TATATTACATCTTAA TERM 147 127435 - 127453 + H 77 -10.4 -3.12187 | opp_overlap 127411 127409 127406, overlap 127433 127430 AAGATACATTTATTA TGCATCTT ATA AAGATGCA TGTATATTACATCTT Sde_0103 127529 - 127762 + | hypothetical protein TERM 148 128576 - 128599 + G 78 -6.6 -4.6644 | overlap 128569 CAGTATTACGCTGTT TGCCGCGTTG CTGG CGGCGCTGCA TTTTTACAATATGTT TERM 149 130297 - 130312 + G 76 -2.5 -5.38839 | overlap 130298 AACCGGCTTTGGTGT TTGGC GCTGTA GCCAG TTTTATTTTTATCTC Sde_0104 127887 - 130691 + | membrane protein-like Sde_0105 131002 - 131901 + | hypothetical protein TERM 150 133257 - 133247 - g 72 -3.2 -5.07486 | TATCCCCAATAAAAA CGAT CAA ACCG ACTTTATAGTTAAAG Sde_0106 131919 - 133295 + | Serine/threonine protein kinase-like Sde_0107 133423 - 133992 + | putative phnA protein TERM 151 134028 - 134001 - T 78 -10 -3.56568 | opp_overlap 134005, overlap 134005 GAATTAGTGGTTAAA TAAAGCTGCG TTTTGTGG CGCAGCTTTA AGAGAAAAGTTTATG TERM 152 134024 - 134005 - T 74 -6.4 -4.42062 | opp_overlap 134005, overlap 134001 TAGTGGTTAAATAAA GCTGCG TTTTGTGG CGCAGC TTTAAGAGAAAAGTT Sde_0108 134989 - 134591 - | hypothetical protein Sde_0109 135811 - 136959 + | hypothetical protein Sde_0110 136966 - 137883 + | hypothetical protein Sde_0111 138171 - 139148 + | hypothetical protein TERM 153 139127 - 139151 + F 73 -3.6 -5.03713 | gap 1, overlap 139128 TCCTTGTGTGGGGCA G-GCTAAGCAA TTAT TTGCCTAGCTC TTTTATTTAATTCTT TERM 154 139128 - 139149 + F 73 -7.3 -4.11369 | overlap 139127 CCTTGTGTGGGGCAG GCTAAGCAA TTAT TTGCCTAGC TCTTTTATTTAATTC TERM 155 139697 - 139720 + F 77 -11.1 -2.79183 | opp_overlap 139687 139691 ACAAAGTGAGCCGCA CCCAGCTTA CCCCCA TAAGCTGGG TGTACTGCGCGTAAA TERM 156 140782 - 140794 + G 78 -5.5 -4.84359 | ATTCTAACCTGCTTT CTGGG GTA TCCAG TTTTTATGGCAATGC Sde_0112 139836 - 142910 + | hypothetical protein TERM 157 143277 - 143315 + T 78 -9.7 -3.53444 | opp_overlap 143278 143279, overlap 143273 143279 TAATAGGAATAAAAA ATCAGGCAGTAGTTAAG ATTTC TTTAACTACTGCCTGTC TTGATTATTCCCCGA TERM 158 143314 - 143278 - T 100 -12.5 -5.54885 | opp_overlap 143277 143273 143279, overlap 143279 AATAGGAATAAAAAA TCAGGCAGTAGTTAA GATTTCT TTAACTACTGCCTGT CTTGATTATTCCCCG TERM 159 143279 - 143313 + T 100 -16.7 -3.34089 | opp_overlap 143278 143279, overlap 143277 143273 ATAGGAATAAAAAAT CAGGCAGTAGTTAAG ATTTC TTTAACTACTGCCTG TCTTGATTATTCCCC TERM 160 143313 - 143279 - T 100 -16 -3.90491 | opp_overlap 143279 143277 143273, overlap 143278 ATAGGAATAAAAAAT CAGGCAGTAGTTAA GATTTCT TTAACTACTGCCTG TCTTGATTATTCCCC Sde_0113 143927 - 143304 - | asparagine synthase, glutamine-hydrolyzing TERM 161 143858 - 143896 + g 70 -8.9 -3.39482 | gap 1, overlap 143860 CTGGATCATCATTAT TC-TCCTCAGCCACAGCG AAAC CGCTGAGGTTGAGCATGA TTATCGCTAATATTG TERM 162 143860 - 143893 + g 77 -11.7 -2.85216 | overlap 143858 GGATCATCATTATTC TCCTCAGCCACAGCG AAAC CGCTGAGGTTGAGCA TGATTATCGCTAATA Sde_0114 145304 - 144639 - | hypothetical protein Sde_0115 146152 - 145382 - | hypothetical protein Sde_0116 148470 - 146872 - | hypothetical protein Sde_0117 148924 - 148517 - | hypothetical protein TERM 163 149471 - 149487 + r 70 -5.9 -4.2679 | opp_overlap 149471 CAGCAAGCAACATAA GGCTTTA AAA TAAAGTC TTTTCCTAGCAATTA Sde_0118 150065 - 149538 - | parallel beta-helix repeat-containing protein TERM 164 149678 - 149668 - G 76 -8.2 -4.11394 | opp_overlap 149668 149667 149663 149662 ACCCCATCTTTAAAA CCCG TTG CGGG GTTTACTTCTAAACC TERM 165 150243 - 150220 - R 100 -11.8 -5.61824 | TAAAATTTAAAAAAA GCCGAGTAAA ACAT CTTACTCGGC AAACACGGTTTTAGA Sde_0119 150823 - 150254 - | hypothetical protein Sde_0120 150915 - 152108 + | major facilitator transporter TERM 166 152126 - 152158 + F 75 -10.6 -2.89177 | gap 1, overlap 152123 CCATAATCTTATTGA GTGGTTAGCGGCCTG CACG CGGGCCGCTA-TCGC TATCGTCTATAAAGT Sde_0121 152355 - 152618 + | hypothetical protein TERM 167 154037 - 154006 - g 79 -12.4 -2.88544 | gap 1, overlap 154016 154020 GGGTACTTCTATACA GCAGGCCAAAC-GCA GCT TGCAGTTTGCCCTGC GCGGGCTAAACCCCA Sde_0122 152795 - 155086 + | inter-alpha-trypsin inhibitor domain-containing protein Sde_0123 155086 - 155820 + | sortase (surface protein transpeptidase)-like TERM 168 156300 - 156310 + G 72 -8.2 -3.81137 | CAGTTTCATGTTAAT GCCC TTG GGGC TTTGCGTGTTTCGGA TERM 169 156529 - 156541 + G 71 -6.9 -4.08394 | opp_overlap 156529 CCGGCTTTGTGCAAA CCCGC ATG GTGGG TTTTGCCGGCGATGT Sde_0124 156003 - 156662 + | short chain dehydrogenase family protein TERM 170 157557 - 157569 + G 74 -5.5 -4.62471 | overlap 157556 157561 GTATGTGCTTTCGTT GGTGG CGG CCATC TTTTTGCCGCTTGGC Sde_0125 156757 - 157725 + | magnesium transporter, putative TERM 171 158739 - 158709 - g 72 -4.7 -4.61527 | gap 1, overlap 158710 AAAATGCCCTAAAAA CCCAGC-CCAAGGC TAAA ACCCTGGTGCTAGA CCCGCCCCGAGACGG Sde_0126 157733 - 158959 + | 23S rRNA (uracil-5-)-methyltransferase RumA Sde_0127 159613 - 159047 - | hypothetical protein Sde_0128 160510 - 159734 - | hypothetical protein Sde_0129 161625 - 160510 - | ferrochelatase TERM 172 161128 - 161104 - G 73 -7.8 -4.16016 | gap 1 GTAGTGGTTAACAAA GCGCAGCTCGG GCAG CC-AGCGGCGC GAAGCAAAATCTTTG TERM 173 161803 - 161785 - R 100 -11 -5.24129 | opp_overlap 161770 161785 GCCGCCTATAAAAAA GGCCGCTT TAA AAGCAGCC TTTTTATGCACTATT TERM 174 161785 - 161803 + r 100 -8.8 -4.87273 | opp_overlap 161785, overlap 161770 GCCGCCTATAAAAAA GGCCGCTT TAA AAGCAGCC TTTTTATGCACTATT Sde_0130 162048 - 161842 - | hypothetical protein TERM 175 162285 - 162297 + H 78 -9.1 -3.76125 | GTTTATCGTGCATTA GCGTG CTG CACGC TTTACATTGCACTGC TERM 176 163508 - 163519 + G 71 -7.2 -4.16842 | GATAGCCGCGTAACC CGCG TGGG CGCG TTTATTCGCAATACA Sde_0131 162437 - 163846 + | undecaprenyl-phosphate galactosephosphotransferase TERM 177 164292 - 164270 - g 77 -11.2 -3.23899 | overlap 164265 TTGTAACCAACCCAA GCAGCGCCGA CTT CCAGCGCCGC ATTCGCGTTACCGGT Sde_0132 163930 - 164550 + | putative polysaccharide export protein, outer membrane TERM 178 164608 - 164575 - g 79 -8.1 -4.28254 | opp_overlap 164578 164581, overlap 164578 CCGCAACAGTTAAAA GATTTAGCTCAAGCC ATTT GGCTTGAGCTCGTTC ACTATAAAGAATGGT TERM 179 164578 - 164605 + G 74 -10.6 -3.1247 | opp_overlap 164575 164578, overlap 164581 CAACAGTTAAAAGAT TTAGCTCAAGCC ATTT GGCTTGAGCTCG TTCACTATAAAGAAT TERM 180 164581 - 164602 + G 87 -14.5 -2.77182 | opp_overlap 164578 164575, overlap 164578 CAGTTAAAAGATTTA GCTCAAGCC ATTT GGCTTGAGC TCGTTCACTATAAAG TERM 181 165147 - 165163 + G 71 -7.9 -3.8709 | opp_overlap 165147 ATCGGGCAATATAGA CGGAAGC GAA GCATCCG TTTCTAGCCGAATTT Sde_0133 164554 - 166077 + | hypothetical protein Sde_0134 166091 - 167377 + | hypothetical protein Sde_0135 167440 - 168399 + | glycosyl transferases-like Sde_0136 168405 - 168776 + | hypothetical protein TERM 182 168828 - 168790 - T 84 -9.7 -3.85835 | AAATAAATAGTTAAA CACCCCTAGTTAATAAC TCACG GCTATTAGCTAGAGGCG CAATTCGGGTTACTT Sde_0137 169752 - 168838 - | hypothetical protein Sde_0138 171281 - 169866 - | hypothetical protein Sde_0139 172180 - 171293 - | FkbH TERM 183 172238 - 172227 - H 82 -5.8 -5.055 | GTAAGTGTTAAAAAA GCTG ACAC CAGC GAGAAGGGTAAATTT Sde_0140 172389 - 173915 + | hypothetical protein TERM 184 174347 - 174361 + G 80 -7.2 -4.56597 | AAGCGCAAGCCCGAA GCTATT TAC AATAGC TTTTTACGAACAGGC Sde_0141 173927 - 174736 + | hypothetical protein Sde_0142 175857 - 174733 - | hypothetical protein Sde_0143 176120 - 177235 + | glycosyltransferase-like protein Sde_0144 177254 - 178360 + | glycosyltransferase-like protein Sde_0145 178362 - 179606 + | hypothetical protein TERM 185 180866 - 180850 - g 70 -2.2 -5.08824 | opp_overlap 180860 GCTGTACTGAAAAAA GCGG CAGCTCTAC CCGC GGTATTTAAATCGAT TERM 186 181372 - 181382 + G 72 -3.2 -4.9725 | GAGCTAATAGAGCGC CCTA AAA TGGG TTTTTCTGTACCAAT Sde_0146 179644 - 181602 + | asparagine synthase (glutamine-hydrolyzing) Sde_0147 181595 - 182782 + | helix-turn-helix, AraC type TERM 187 183352 - 183337 - g 77 -3.4 -5.15634 | GAGTTTATCAAAAAA TTAAAT TCTA ATTTAA TCCCCGTGAGGTTTG Sde_0148 182788 - 184122 + | glycoside hydrolase family protein TERM 188 185330 - 185353 + G 73 -9.8 -3.40403 | opp_overlap 185334, overlap 185334 TTTCGTCGCTTTCTA TGAAGTTATT AGAG AATAACTTCA TTCTCCTGGGGAAAA Sde_0149 184303 - 185391 + | cellulose-binding family II protein Sde_0150 186898 - 185411 - | hypothetical protein TERM 189 185958 - 185945 - G 71 -3.9 -4.74013 | TCTAAATAGATAAAA TTTTC CGAA GAAAA GAGTGTTTCTGTCAA TERM 190 187121 - 187110 - H 85 -4.4 -5.41746 | AACTTCTCAAAAAAA CCTA TTTT TAGG GCGATCACCATTTGG Sde_0151 187330 - 188814 + | ATP-dependent DNA helicase RepA Sde_0152 189988 - 188819 - | hypothetical protein TERM 191 189583 - 189568 - G 78 -4.8 -4.95618 | AATAGGAAAAATAAA GTATTA TTGG TAATAC CATGGCAACACCTAA Sde_0153 190535 - 190107 - | hypothetical protein TERM 192 190514 - 190498 - G 72 -9.4 -3.53012 | CCGCCTGCGGCTAAA GCTGCG GCGGT CGCAGC TAAAAATAAACGCCT Sde_0154 191976 - 190549 - | 2-keto-gluconate dehydrogenase subunit-like TERM 193 191952 - 191932 - G 89 -5.3 -5.75945 | opp_overlap 191932, overlap 191919 191934 ACGCTTTAAAAAAAA GCTGCTGGC AAA GCCAGTACC TACTATAACTAAATC Sde_0155 193438 - 191987 - | ATPase TERM 194 192779 - 192798 + g 79 -9.4 -4.13014 | opp_overlap 192778 192777 ATGGTTGGCATAAGC TGTTAGGT TACT ACCTAACA TTTTGGCGCTGTAAC Sde_0156 194481 - 193465 - | hypothetical protein TERM 195 193690 - 193722 + g 70 -5 -4.4078 | gap 1, overlap 193696 GCGCCCTACGGTATA GC-AAAATACTGGGG AAGC CTCTGGTATTTTCGC TTTTAATTCAACCCA Sde_0157 195706 - 194498 - | glycosyltransferase-like protein TERM 196 195387 - 195414 + g 72 -5 -4.60073 | gap 1, overlap 195370 195388 AAGTCTGAAAAGTTT TCGCTTGT-ATTA AAG TAATCGCAAGCGG TTTTATAATTGTATG TERM 197 195759 - 195783 + r 74 -4.9 -4.8269 | opp_overlap 195760, overlap 195760 GTGGTAGATTAATCG ATGTAGCCGGT TGT GCCGGTTGCAC TTTTTACTAGTTCTG TERM 198 195760 - 195782 + r 71 -8.4 -3.48529 | opp_overlap 195760, overlap 195759 TGGTAGATTAATCGA TGTAGCCGGT TGT GCCGGTTGCA CTTTTTACTAGTTCT Sde_0158 196300 - 195752 - | acetyltransferase Sde_0159 197440 - 196328 - | hypothetical protein TERM 199 197040 - 197052 + g 84 -4.9 -5.33405 | GGTGTTTGCGTAGGG TCAAT CTT ATTGA TTTTTATTTCGTCCC TERM 200 198596 - 198616 + G 71 -10.5 -2.70946 | opp_overlap 198576 198593 198592, overlap 198579 198595 198593 TGCGTAAAATACGCA CTGTCATTC GCG GAATGACGG CTCTTTCTCGCCACC Sde_0160 197824 - 198963 + | glycosyl transferase, group 2 family protein Sde_0161 198963 - 200090 + | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis-like TERM 201 200861 - 200873 + G 74 -3.4 -5.055 | AGAAAAAGTTTCAAT TGCA CTGGA TGCA TTTTTTCAGCGTTGC Sde_0162 200151 - 200984 + | methylase involved in ubiquinone/menaquinone biosynthesis-like Sde_0163 201000 - 202121 + | methylitaconate delta2-delta3-isomerase TERM 202 202435 - 202455 + G 77 -3.9 -5.13722 | overlap 202430 GTACATTGCGCAGCA TGAGGCTGT ATT GCAGTCGCA TTTTGTTTTGCTCAA Sde_0164 202118 - 203368 + | ATP-grasp enzyme-like TERM 203 203570 - 203584 + F 70 -3.6 -4.78107 | GATCGAATCTTATTC TAGTTC AGA GAATTA TTTTTACTGATACTG Sde_0165 203758 - 203997 + | acyl carrier protein TERM 204 204813 - 204796 - g 70 -2.5 -5.00884 | overlap 204797 AGCGCTGTTAAAAAA GCGCGCC AAGC GGTGCGT CATGCTTACCGCAAA Sde_0166 204010 - 205197 + | putative carnitine operon oxidoreductase TERM 205 205819 - 205838 + G 73 -2.2 -5.14965 | gap 1, overlap 205820 205822 GCCTAGAGGTAGAAG TGG-TTGTT GCT AACGATCCA TTTTTTGGTCGCGGT Sde_0167 205197 - 206132 + | hypothetical protein Sde_0168 206123 - 207091 + | hypothetical protein Sde_0169 207182 - 209647 + | mannosidase TERM 206 210145 - 210173 + G 79 -8 -4.49556 | overlap 210146 GAAATGTTACAGTCG ATGCAGGCGGGC TTTGT GCCTGCCAGCAA TTTATTTGATGCCGG TERM 207 210146 - 210172 + G 77 -11.5 -3.29252 | overlap 210145 AAATGTTACAGTCGA TGCAGGCGGGC TTTGT GCCTGCCAGCA ATTTATTTGATGCCG Sde_0170 209644 - 211437 + | hypothetical protein Sde_0171 211434 - 211673 + | hypothetical protein TERM 208 212791 - 212763 - g 70 -5.1 -4.39426 | overlap 212765 212766 CAGAGCTTTATAAAA TACGCGCACTAGC CGA GCAAGAGCGCAAA CAAACGCCATCGCTG Sde_0172 211673 - 213322 + | enzyme involved in methoxymalonyl-ACP biosynthesis-like TERM 209 215018 - 215008 - g 100 -4 -5.89659 | AGAAAAAAATAAAAA TACA TTT TGTA GAGAATGCAGATCAC TERM 210 215066 - 215121 + G 74 -3.4 -4.93365 | opp_overlap 215076, overlap 215078 GATGCAGTCAAATTT CTGTACTAAATTTTTAGCCGCATTAA TAGA TTGATACGGCCAAATATCTAGTGGAG TTTTTGCTTGTAAGC Sde_0173 213342 - 215099 + | hypothetical protein Sde_0174 216189 - 215113 - | acyltransferase-like Sde_0175 217053 - 216244 - | hypothetical protein Sde_0176 217969 - 217187 - | methylase involved in ubiquinone/menaquinone biosynthesis-like Sde_0177 218801 - 218019 - | hypothetical protein TERM 211 218842 - 218877 + r 78 -9 -3.78902 | gap 1, overlap 218844 GTATATTCTGAAACT TGCGCGCTCGAA-CGGC ATT GCTAATTCGAGCGCGTG TTTAGCTATTGATTA TERM 212 218844 - 218875 + r 89 -11.6 -3.46872 | gap 1, overlap 218842 ATATTCTGAAACTTG CGCGCTCGAA-CGGC ATT GCTAATTCGAGCGCG TGTTTAGCTATTGAT Sde_0178 221525 - 218883 - | hypothetical protein TERM 213 218934 - 218957 + g 76 -4.4 -5.0133 | overlap 218937 218946 218956 TGTGGTTATTTCTTG GTTGTCGGGC GCCA GCTCGGCTGC TTTTTTAAGAAGCTC TERM 214 219667 - 219677 + g 71 -6.8 -4.18018 | overlap 219655 219653 219652 ACGGCACTCGCCTGC GAGC GCT GCTC TTTTAGCTCGGCAAG TERM 215 220192 - 220209 + g 73 -7.7 -4.11394 | AATGCAATGTTATCT GGCGCAA TAGC TTGTGCC TTTTCGAGCTCGGCT TERM 216 221526 - 221509 - G 72 -2.7 -5.07053 | overlap 221511 AAGGATGTTAAAAAA CGTGAAA GCTG TTTCATG CTCGAGTGTCCTCAA TERM 217 221581 - 221613 + r 93 -9.9 -4.2828 | overlap 221582 TGAATATGTTAGTTA TCTTAAGCGCCTTAG CGA CTAGCGCGCTTAGGG TTTTGATCAGTCGCG TERM 218 221582 - 221612 + r 79 -11.2 -3.16647 | overlap 221581 GAATATGTTAGTTAT CTTAAGCGCCTTAG CGA CTAGCGCGCTTAGG GTTTTGATCAGTCGC Sde_0179 223445 - 222279 - | AraC family transcriptional regulator Sde_0180 224593 - 223457 - | AraC family transcriptional regulator TERM 219 223670 - 223680 + g 75 -2.6 -5.13741 | CAACTCTTCTTTTAA TAAA TTA TTTA TTTTTGTTCGATTAA TERM 220 224445 - 224469 + g 95 -2.8 -5.83211 | gap 1, opp_overlap 224445 224446, overlap 224445 224446 AGTTGATCTGAAAAA G-CCCTAAGCG ACCA TGCATAGGGAC TTTTTTCTTTTGGTA TERM 221 224826 - 224789 - H 71 -10 -2.71364 | opp_overlap 224783 224782 224797, overlap 224797 224801 TTAGGTTGTGAATTA TGAGTCAATCAAGCAG TCATTT CTGCTTGATTGACTGC GAAAAGCGTTTATTA Sde_0181 225639 - 227363 + | Beta-1 4-xylanase-like TERM 222 227746 - 227762 + G 75 -9.5 -3.65046 | opp_overlap 227746 227745 CAGGGGGCTCACAAC GGCAATT TTG AATTGCC TTCTTGCGCTGGAGG TERM 223 228002 - 228012 + G 71 -6.8 -4.17089 | TAGAGAATTTGAGCG GCCA GAA TGGC TTTTCACCATTTAGC Sde_0182 227410 - 230211 + | hypothetical protein TERM 224 230255 - 230279 + F 100 -14.3 -4.84359 | GTATTCTCGTGCTTA GCGGTAGGGCT AAA AACCCTACCGC TTTTTGTGGGAGTCC TERM 225 231045 - 231022 - f 74 -9.6 -3.322 | overlap 231023 ACCCGGAGAGATTAA CTGGTGCACA TCCA TGTGCACCAC CCTGCGGGCGCCTTT TERM 226 231044 - 231023 - f 91 -13.1 -2.58999 | overlap 231022 CCCGGAGAGATTAAC TGGTGCACA TCCA TGTGCACCA CCCTGCGGGCGCCTT TERM 227 231132 - 231155 + F 76 -6.6 -4.52589 | opp_overlap 231134, overlap 231134 ATGGCACATACAAAA AAGCCCCGTC TAAA GACGAGGCTG TTTTATATGGCGCAC TERM 228 231153 - 231134 - f 100 -11.4 -5.4251 | opp_overlap 231132 231134 GGCACATACAAAAAA GCCCCGTC TAAA GACGAGGC TGTTTTATATGGCGC TERM 229 231134 - 231153 + F 81 -9.2 -3.87627 | opp_overlap 231134, overlap 231132 GGCACATACAAAAAA GCCCCGTC TAAA GACGAGGC TGTTTTATATGGCGC TERM 230 231207 - 231184 - f 74 -9.6 -3.322 | overlap 231185 ACCCGGAGAGATTAA CTGGTGCACA TCCA TGTGCACCAC CCTGCGGGCGCCTTT TERM 231 231206 - 231185 - f 91 -13.1 -2.58999 | overlap 231184 CCCGGAGAGATTAAC TGGTGCACA TCCA TGTGCACCA CCCTGCGGGCGCCTT TERM 232 231294 - 231317 + F 76 -6.6 -4.52589 | opp_overlap 231296, overlap 231296 GTGGCACATACAAAA AAGCCCCGTC TTTA GACGAGGCTG TTTTATATGGCGCAC TERM 233 231315 - 231296 - f 100 -11.4 -5.4251 | opp_overlap 231294 231296 GGCACATACAAAAAA GCCCCGTC TTTA GACGAGGC TGTTTTATATGGCGC TERM 234 231296 - 231315 + F 81 -9.2 -3.87627 | opp_overlap 231296, overlap 231294 GGCACATACAAAAAA GCCCCGTC TTTA GACGAGGC TGTTTTATATGGCGC TERM 235 231587 - 231602 + F 71 -4 -4.90917 | TAGCAATTAAGGGTG CGGAAA GAGG TTTTCG TTTTTGATTACATTT TERM 236 232078 - 232045 - g 71 -10.3 -2.71791 | gap 1, overlap 232044 ACTGGCGCGGCAAAC GCGCCTAAGCTAGGTG ATG CAGC-AGCTTGGGCGC CACGTATAGCAAAAG Sde_0183 231817 - 232221 + | cellulose binding, type IV TERM 237 232236 - 232275 + T 100 -11.5 -4.17296 | AGGGCTAGCCTAGCA GTGGGCAGTTTTCAGCT TACAGC AGCTGTTAACTGTCCAC TTTCTCTCTGTAAAC Sde_0184 234315 - 232297 - | ATP-dependent DNA helicase Rep TERM 238 232557 - 232571 + g 70 -5 -4.51812 | CTTCTTCTATGCTGT TTCTGT GGG GCAGAA TTTCTTCTTCTAGGC TERM 239 233750 - 233736 - G 76 -4.3 -5.00616 | GGTGCTCCGAAAAAA GCTTA GAAGG TAAGC GGATAAGATCGTCAA Sde_0185 235009 - 234416 - | putative competence protein ComM Sde_0186 235189 - 235890 + | urease, gamma subunit region TERM 240 237034 - 237061 + G 75 -6.3 -4.54821 | opp_overlap 237041, overlap 237024 237036 AGGCTGTGATGACTC TACACGAGGTG GAGCAG CACCTTGTGGA TTTTATCGTTAACGT TERM 241 237368 - 237380 + G 81 -3.5 -5.34309 | opp_overlap 237368 ACGTGACCCAAGGGA TATTT CAA AAATA TTTTTCTTTGATCCT Sde_0187 235935 - 237770 + | urease, beta subunit Sde_0188 237775 - 238656 + | urease, alpha subunit Sde_0189 238778 - 239701 + | hypothetical protein TERM 242 239942 - 239954 + G 70 -9.1 -3.4015 | AGCCTCAAGAAGGGT TGGCG ATT CGCCA TTATGCGGTTCTTGT TERM 243 240793 - 240803 + G 82 -3.2 -5.52347 | CGGGTTTGCGAGCGT CACT GCG GGTG TTTTTTAATTTTGTT Sde_0190 239706 - 241214 + | hypothetical protein Sde_0191 243006 - 241174 - | urease accessory protein UreG TERM 244 242860 - 242876 + g 83 -9.5 -4.16016 | TGAAGTCAACGGCTC TTGACGA GAT TCGTCAA TTTCTTCAAGGATCA TERM 245 243119 - 243134 + H 76 -10.4 -2.91994 | overlap 243118 243109 ACATGCAGCTCAGTG GCGCGA ATGA TCGCGC ATTTACCTGTTTTTA Sde_0192 243465 - 244391 + | hypothetical protein Sde_0193 244443 - 245522 + | hypothetical protein TERM 246 245630 - 245642 + T 100 -9.1 -5.29445 | opp_overlap 245624, overlap 245625 TGGGATAATCGGTGG GCAGC CCA GCTGC TTTTTGTTCTTGGGA TERM 247 245712 - 245736 + T 88 -10.7 -3.87641 | opp_overlap 245705 245713, overlap 245713 AGCAATAATTATGCA AGCCGAGCGAT CAA ATTGCTCGGCC TTTCTAAACGGTATT TERM 248 245735 - 245713 - T 86 -12 -3.16421 | opp_overlap 245712 245713, overlap 245705 GCAATAATTATGCAA GCCGAGCGAT CAA ATTGCTCGGC CTTTCTAAACGGTAT TERM 249 245713 - 245735 + T 100 -14.2 -2.92102 | opp_overlap 245713 245705, overlap 245712 GCAATAATTATGCAA GCCGAGCGAT CAA ATTGCTCGGC CTTTCTAAACGGTAT Sde_0194 250088 - 246255 - | hypothetical protein TERM 250 246486 - 246501 + g 81 -4.8 -5.22258 | GATATATTCTGCATA TAATGA TACA TCATTA TTTTCTTTTGCTTTC TERM 251 248393 - 248379 - G 72 -5.7 -4.42386 | TGCTGACTGATAAAA CGCAT GGGTA ATGCG AATCGTCCCATTATC Sde_0195 252359 - 250515 - | UvrD/REP helicase family protein TERM 252 251919 - 251929 + gr 85 -5.4 -5.37865 | AAGCTGGTAGACATT TACG CCG CGTA TTTTTTGGTTATTCA Sde_0196 254334 - 252334 - | ATPase TERM 253 252574 - 252586 + gr 79 -7.7 -4.29176 | GTCTGTTTTTAGCGT TGCGA TTT TCGCA TTTTCAATTGACTCT Sde_0197 254585 - 254370 - | ATPase Sde_0198 256242 - 254575 - | exodeoxyribonuclease VII large subunit Sde_0199 256581 - 256249 - | hypothetical protein Sde_0200 257252 - 256578 - | hypothetical protein Sde_0201 258016 - 257390 - | hypothetical protein Sde_0202 259696 - 259070 - | hypothetical protein Sde_0203 261704 - 262780 + | hypothetical protein Sde_0204 263804 - 263064 - | diaminopimelate epimerase Sde_0205 264241 - 263804 - | diaminopimelate decarboxylase Sde_0206 264813 - 264238 - | sigma-24 (FecI-like) Sde_0207 265122 - 266342 + | cobyric acid synthase CobQ TERM 254 266548 - 266571 + G 70 -9.6 -3.10715 | ATAGAGGCTGTATCG TGGGTATTCC CCTG GGAATACCCC TTGCGTGCTCCTCAG Sde_0208 266335 - 268542 + | hypothetical protein Sde_0209 268546 - 269277 + | cellulose binding, type IV TERM 255 269933 - 269907 - g 74 -5.9 -4.56978 | opp_overlap 269907 269908, overlap 269908 CCCGGAAAGAAGAAA GTCGCCAATGT CATGT ACATTAGCGAA TTTAAAAATTGTAGA TERM 256 269932 - 269908 - g 70 -9.4 -3.33464 | opp_overlap 269907 269908, overlap 269907 CCGGAAAGAAGAAAG TCGCCAATGT CATGT ACATTAGCGA ATTTAAAAATTGTAG TERM 257 270110 - 270097 - g 73 -2.4 -5.09895 | GACTTAGGTAAAAAA CGAA AAGAAA TTCG CGAATATGAAGATTC Sde_0210 269479 - 271188 + | hypothetical protein TERM 258 271770 - 271781 + G 73 -2.2 -5.14563 | CGTTTTCATCAGAAA TCTG GAGC CAGG TTTTTTGATCGGGCC Sde_0211 271185 - 271937 + | hypothetical protein TERM 259 271934 - 271947 + T 73 -5.3 -4.67168 | ACCCACGTCTAGCCT GTAGA TTTC TCTAC TTTTTAAAGCTTTTT Sde_0212 272952 - 272197 - | hypothetical protein Sde_0213 273684 - 272962 - | hypothetical protein TERM 260 273124 - 273134 + g 72 -3.2 -4.94972 | ATAGGTTTGCAGTTC TGGT GGG GCCA TTTTTACTTCTCCTA Sde_0214 274346 - 273681 - | hypothetical protein Sde_0215 275547 - 274693 - | ComM-related protein Sde_0216 276288 - 278180 + | hypothetical protein TERM 261 278232 - 278221 - T 85 -5.8 -5.24129 | overlap 278223 TTTTTGCATAAAAAA GACG GTGC CGTC ACAGAGCAAGTGTTT Sde_0217 278826 - 278584 - | hypothetical protein TERM 262 278957 - 278977 + H 71 -3.1 -5.03145 | overlap 278974 TGCCCTTATTTTGTG CGCGCATGG TTT TCAGTCGCG TTTTTTAAAGCGTTG Sde_0218 279049 - 279936 + | urease accessory protein D TERM 263 280098 - 280073 - f 100 -14.9 -4.08216 | GGAGGCTTTTCAAAA TGCTCACAACA GGAG TGTTGTGAGCA AGCCCCATGGAAGGG ureA 280240 - 280542 + | urease subunit gamma Sde_0220 280559 - 280864 + | urease ureC 280866 - 282572 + | urease subunit alpha TERM 264 282669 - 282694 + F 78 -9.7 -3.57263 | overlap 282690 TACATCTGTGTAGCT TGCTCACGGCA TCCT TACCGTGGGCA TTTCAGCCTGCCCCT TERM 265 282966 - 282952 - g 75 -6.4 -4.39002 | AAAGCCGCCACAAAA CGCAAA CAA CTTGCG GTAAAGATTTAGGCT Sde_0222 282846 - 283352 + | Dual specificity protein phosphatase Sde_0223 283384 - 284049 + | urease accessory protein UreF TERM 266 284195 - 284213 + G 73 -2.3 -5.10461 | gap 1, overlap 284197 TACTAACGATATTTA CACGCGCG AAGA CGC-CGAG TTTTTATTGCGTCAC Sde_0224 284061 - 284684 + | urease accessory protein UreG TERM 267 284813 - 284825 + G 72 -6.2 -4.35116 | CGGATGGCCCGCGCT CGCC CTATT GGCG TTTTGCTGTGCACTG Sde_0225 284692 - 285318 + | transport-associated protein Sde_0226 285661 - 286971 + | urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein TERM 268 287029 - 287064 + F 86 -11.3 -3.25942 | opp_overlap 287025 287023 287022 AGAACCAATCAGCCA CAGCAATTCAACTCT GGTGCA AGCGTTGAGTTGCTG TTGGTGTAAAAGGCT TERM 269 287076 - 287093 + F 71 -6.9 -4.16943 | opp_overlap 287076 GCTGTTGGTGTAAAA GGCTCGG CTTG CTGGGCC TTTTACAATCTCAAC TERM 270 287476 - 287448 - g 85 -3.3 -5.58454 | gap 2 GCGATAGCAAAAAAA TTCG-CAC-CAAC AACAA GTTGCGTGGCGAA ATAAACACTCAGGTT TERM 271 288508 - 288519 + G 73 -4.4 -4.80959 | opp_overlap 288492 CAATGTGGGCCCCAA CCTT GGCC AAGG TTTTATTATCGATTC Sde_0227 287126 - 288739 + | Fis family transcriptional regulator Sde_0228 288742 - 290040 + | ABC-type branched-chain amino acid transport system permease component-like TERM 272 290081 - 290064 - g 81 -3.5 -5.37043 | ACCTCACATAAAAAA GTACAAA GCAT TTTATAC CTAAGCGGTGTAACC Sde_0229 290040 - 290801 + | histidine kinase Sde_0230 290825 - 291520 + | response regulator receiver domain-containing protein TERM 273 291545 - 291562 + F 100 -9.8 -5.75342 | opp_overlap 291545 GGTATGCACCCAAAA GCGCCC CTTCGA GGGCGC TTTTTTTTGGCCCAA TERM 274 291562 - 291545 - f 91 -10.5 -4.19817 | opp_overlap 291545 GGTATGCACCCAAAA GCGCCCC TTCG AGGGCGC TTTTTTTTGGCCCAA Sde_0231 291906 - 292613 + | histidine kinase TERM 275 292620 - 292650 + F 100 -17.7 -5.40072 | opp_overlap 292618, overlap 292641 292642 GGCGAGTAATTGATT CAGCCGGCATCTA TTTAT TAGGTGCCGGCTG TTTTTTTAAACAGCA TERM 276 292679 - 292663 - f 71 -8.7 -3.34398 | opp_overlap 292642 292641, overlap 292661 CTGTTTTTTTAAACA GCAGCCA ATT TAGCTGC AAAAAAATAAGGAGC Sde_0232 292701 - 293039 + | nitrogen regulatory protein P-II TERM 277 293602 - 293624 + G 77 -12 -2.78264 | overlap 293596 293594 GGTATTGTTCACATG GCTGGTGCTG CTG CAGCGCTAGC TGGTGTATTAGTATT Sde_0233 293080 - 294315 + | ammonium transporter TERM 278 294362 - 294343 - f 100 -10.6 -5.14563 | opp_overlap 294343 GGTTTGATTAAAAAA CCGGGGGC TTAG GCCTCCGG TTTTTTTTCGTCTGG TERM 279 294343 - 294362 + F 100 -12.8 -5.90981 | opp_overlap 294343 GGTTTGATTAAAAAA CCGGGGGC TTAG GCCTCCGG TTTTTTTTCGTCTGG Sde_0234 294612 - 294950 + | nitrogen regulatory protein P-II TERM 280 294986 - 295003 + F 100 -10.5 -5.64421 | opp_overlap 294986 TTGCAAGCTACTAAA GGCTCCC AAAC GGGGGCC TTTTTTATTTGAGCT TERM 281 295003 - 294986 - f 75 -8.3 -3.794 | opp_overlap 294986 TTGCAAGCTACTAAA GGCTCCC AAAC GGGGGCC TTTTTTATTTGAGCT Sde_0235 295256 - 295495 + | hypothetical protein TERM 282 295567 - 295543 - T 100 -10 -5.4833 | opp_overlap 295543 CTAGCCAATAAAAAA CGGGTTGATG TTGTG CATCAGCCCG TTTTTTATGTGTGAT TERM 283 295543 - 295567 + T 100 -12.9 -5.43414 | opp_overlap 295543 CTAGCCAATAAAAAA CGGGTTGATGT TGT GCATCAGCCCG TTTTTTATGTGTGAT Sde_0236 296308 - 295625 - | hypothetical protein Sde_0237 297138 - 296305 - | diaminopimelate epimerase Sde_0238 298438 - 297194 - | diaminopimelate decarboxylase TERM 284 297280 - 297257 - G 74 -8.2 -3.96148 | opp_overlap 297260 CTCGCGCACTACAAA GTATTTGTCG CCAT CGACAAGTAC TTCCGCTGCGCGGCC TERM 285 298399 - 298415 + g 95 -12.3 -4.30576 | opp_overlap 298394 298391 TAAGAGAGCACTGCT CGGCGAA CAG TTCGCCG TTTTGATAGTGAAAG Sde_0239 298766 - 298536 - | hypothetical protein Sde_0240 300251 - 298794 - | cobyric acid synthase Sde_0241 302533 - 300350 - | hypothetical protein TERM 286 302068 - 302081 + g 72 -5.3 -4.56597 | TACTATCGCCTATAG TTGTG TCGC CACAA TTTTTCGCAAAAGCC TERM 287 302433 - 302448 + g 73 -4 -4.78029 | GTAATAAAGGGAGCG CTACTG ACTG TAGTAG TTTTAGTTTTATTGG TERM 288 303204 - 303233 + H 100 -13.1 -3.54158 | opp_overlap 303209, overlap 303209 AGTTTATATGCGTAT TAAAAGAGTCCTT TTTA AAGGGCTCTTTTA TTGATTGTTAAGGTG TERM 289 303228 - 303209 - H 72 -6.4 -4.26344 | opp_overlap 303204 303209 ATATGCGTATTAAAA GAGTCCTT TTTA AAGGGCTC TTTTATTGATTGTTA TERM 290 303209 - 303228 + H 100 -8.6 -4.84262 | opp_overlap 303209, overlap 303204 ATATGCGTATTAAAA GAGTCCTT TTTA AAGGGCTC TTTTATTGATTGTTA TERM 291 303303 - 303329 + H 100 -12.3 -5.24531 | gap 1, opp_overlap 303303 TTAATTTGTGAAAAA CGGCGGG-GCTG GCGG CAGTACCCGCCG TTTTTTATGGGCGAT TERM 292 303329 - 303303 - H 100 -10.1 -4.59853 | gap 1, opp_overlap 303303 TTAATTTGTGAAAAA CGGCGGG-GCTG GCGG CAGTACCCGCCG TTTTTTATGGGCGAT TERM 293 303537 - 303524 - H 75 -3.1 -5.10497 | AACTTATGTAAAAAA TAACG TTGT CGCTA GTGGTTGCCATTTGA TERM 294 303747 - 303768 + G 74 -8.7 -3.85878 | CTGGTGGCTCTAATC CTGGTGCTA GTTC TAGCTCCAG TTCTTCGTCTTCTTC TERM 295 304504 - 304518 + G 71 -3.4 -4.89477 | TGGTGATGTAGTTTA CGTACC CGA GGGGCG TTTTATTCTTACGCA Sde_0242 303641 - 305686 + | Band 7 protein TERM 296 306504 - 306486 - g 71 -7.5 -3.84246 | GGCTTAAGTAGTAAA TCCATTG TTCAT CAATGGA AGGCGCAAGGCTACG Sde_0243 305889 - 306917 + | hypothetical protein TERM 297 306892 - 306917 + F 100 -9.3 -4.92239 | opp_overlap 306892, overlap 306886 CTTCAGGTGGTGAAA TTATTTATAAC TATA GTTATAAATAA TTTTTCAATTTTTGC TERM 298 306917 - 306892 - f 76 -9.3 -3.54424 | opp_overlap 306892 306886 CTTCAGGTGGTGAAA TTATTTATAAC TATA GTTATAAATAA TTTTTCAATTTTTGC Sde_0244 306958 - 307320 + | hypothetical protein TERM 299 307537 - 307514 - T 100 -12.4 -5.63645 | opp_overlap 307514 GCAAAATACAAAAAA GGCCCAACAG TTTC CTGCCGGGCC TTTATCAAAACGCTT TERM 300 307514 - 307537 + T 72 -8 -3.86194 | opp_overlap 307514 GCAAAATACAAAAAA GGCCCAACAG TTTC CTGCCGGGCC TTTATCAAAACGCTT Sde_0245 310153 - 307565 - | exo-1,4-beta-glucosidase TERM 301 310123 - 310136 + g 72 -5.3 -4.55887 | opp_overlap 310123 TTGCTAAGCTTAAAG CAAGA CCTT TCTTG TTTATCTTTTTGAGC Sde_0246 310589 - 311446 + | hypothetical protein TERM 302 311475 - 311501 + T 70 -3.8 -4.88407 | opp_overlap 311475 ATATGCGCGTAAAAA TTAATCGCTTTG CAT TAAGGTGGTTAA TTTTTGCTTGGCTAA Sde_0247 311912 - 311475 - | hypothetical protein TERM 303 311682 - 311694 + g 71 -3.3 -4.86621 | opp_overlap 311682 ATCTTCGTGATTTAA CTCGC TTG GCAAG TTTTTAATTAGAACT Sde_0248 312758 - 312012 - | hypothetical protein TERM 304 313389 - 313377 - g 84 -4.7 -5.28942 | TATCGCAAACAAAAA GCTCG CCC CGCGC TAGAAGACATAGACG Sde_0249 313116 - 313673 + | sigma-24 (FecI-like) TERM 305 313691 - 313681 - f 70 -5.4 -4.52897 | overlap 313689 ATAAGTAATAACAAA GAGT AAA ACTC ACGTTGTGTGAGAGC TERM 306 313703 - 313689 - f 73 -5.7 -4.55446 | overlap 313681 TAACAAAGAGTAAAA CTCAC GTTGT GTGAG AGCCAATTAAAAATT Sde_0250 313730 - 314455 + | hypothetical protein TERM 307 314906 - 314888 - g 77 -8.8 -3.88946 | GAGCGCAGAGAAGAA GTTCGCGA CCG TCGCGATC AGCGCCGCGAAGAAA Sde_0251 314531 - 314956 + | hypothetical protein TERM 308 314986 - 315012 + F 100 -15.9 -5.68023 | AAGTTTTGAGGTTGT GCGCAGGCTTG GTTAA CGAGCCTGCGC TTTTTTTCGTTATAG TERM 309 315470 - 315458 - g 86 -2.7 -5.75599 | CAAACTATAAAAAAA TATCG GCG CAATA CCCAGAGGATTCAAG Sde_0252 315043 - 316374 + | hypothetical protein TERM 310 316450 - 316422 - T 70 -6 -4.29391 | gap 1, opp_overlap 316448 AACTATAAAAGCAAA GCGACCACGCCTA AGTA TTGG-ATGGTCGC TGAGTATTCTATGCT Sde_0253 317303 - 316464 - | peptidyl-prolyl cis-trans isomerase TERM 311 317487 - 317459 - R 100 -12.4 -4.3014 | overlap 317449 317460 ATATAGCCATTAAAA GGCCTGCCGCAC ACAAA GTACGGCAGGCT ACGGTGTTAACTTAA TERM 312 317486 - 317460 - R 100 -15.9 -3.17361 | overlap 317449 317459 TATAGCCATTAAAAG GCCTGCCGCAC ACAAA GTACGGCAGGC TACGGTGTTAACTTA Sde_0254 318120 - 317545 - | hypothetical protein TERM 313 318818 - 318835 + G 71 -9.9 -3.19246 | GAGTGTGCCTTTATT GCTGCTA GTAC TAGCAGC TTGGATTGCGCTTGC Sde_0255 318744 - 320489 + | hypothetical protein Sde_0256 320556 - 322238 + | hypothetical protein Sde_0257 323545 - 322472 - | response regulator receiver domain-containing protein TERM 314 323929 - 323939 + H 73 -8.2 -3.64259 | overlap 323933 TCTCTAGGCGTTTGG CGGC TTG GCCG TTGTTGCCAATAGTT Sde_0258 324156 - 324824 + | histidine kinase TERM 315 324848 - 324871 + F 100 -13.2 -5.2696 | opp_overlap 324843 324848, overlap 324866 TTAATTAAGACTTAA GCTGAGTGCT ATAT GGCACTCAGC TTTTTTGAGTTTTAC TERM 316 324871 - 324848 - f 93 -12.5 -3.21806 | opp_overlap 324848 324866, overlap 324843 TTAATTAAGACTTAA GCTGAGTGC TATATG GCACTCAGC TTTTTTGAGTTTTAC Sde_0259 324997 - 325554 + | hypothetical protein TERM 317 326103 - 326091 - g 73 -10.5 -2.97188 | TTACACCATGATAGA GCGCG TAG CGCGC ACACCGGCCAATGTA TERM 318 326295 - 326278 - g 74 -5.5 -4.72272 | TTTGGTCACGAAAAA GGCGC GTTTACCG GCGCC GTAGCGAGAAAGATA Sde_0260 325654 - 326985 + | response regulator receiver domain-containing protein Sde_0261 327044 - 327259 + | hypothetical protein TERM 319 328113 - 328100 - g 79 -8.1 -4.19624 | GAGCTTGAAGACAAA GTGCG TCAG CGCAC TCAGGAAATAACCCT Sde_0262 327392 - 328909 + | bacteriophytochrome-like protein TERM 320 328926 - 328913 - f 75 -2.4 -5.33331 | CAAACAGAATAAAAA TACG GTGCAG CGTA CTAAGTGGCGTTGTT Sde_0263 328972 - 329430 + | response regulator receiver domain-containing protein Sde_0264 329470 - 331470 + | Signal transduction histidine kinase-like TERM 321 331628 - 331612 - f 76 -9.4 -3.53224 | overlap 331594 331616 CACGCTCGTCTGAAA GCCACG CCAGC CGTGGC ATTCAGGCGATATAA Sde_0265 331773 - 331940 + | hypothetical protein TERM 322 331994 - 331956 - T 100 -13.5 -3.48036 | gap 2, opp_overlap 331956 331967, overlap 331967 TAGCACCACAAGCAA GACCAAAAA-AA-CCAGGC TTA GCCTGGTTTTTTTTTGGTC TTTTAAAAAGTAAGT TERM 323 331956 - 331994 + T 100 -13.5 -4.09864 | gap 2, opp_overlap 331956 331967, overlap 331967 TAGCACCACAAGCAA GACCAAAAA-AA-CCAGGC TTA GCCTGGTTTTTTTTTGGTC TTTTAAAAAGTAAGT TERM 324 331981 - 331967 - T 100 -11.4 -5.63374 | opp_overlap 331956 331967, overlap 331956 GCAAGACCAAAAAAA CCAGGC TTA GCCTGG TTTTTTTTTGGTCTT TERM 325 331967 - 331981 + T 100 -11.4 -6.21477 | opp_overlap 331967 331956, overlap 331956 GCAAGACCAAAAAAA CCAGGC TTA GCCTGG TTTTTTTTTGGTCTT TERM 326 332133 - 332100 - T 100 -14.1 -5.80003 | opp_overlap 332131, overlap 332131 GCAACAAATAAAAAA GCCCCATCTATAGTA GCGT TACTATAAATAGGGC CAAAGGGCTTGCGTA Sde_0266 333780 - 332263 - | small-conductance mechanosensitive channel-like TERM 327 332401 - 332413 + g 78 -5.5 -4.91109 | CTTTAAATGCAGTGG CGGTG CAG TACCG TTTTTATCCTCGCCA TERM 328 333735 - 333694 - G 72 -5.4 -4.45068 | gap 1 ATTGGCAACAAGAAA GCCATTGTG-TAATAGT GAGAATGCA ACTACCAGCACAATGGC TAAAAAATAAATGTG Sde_0267 334083 - 333856 - | hypothetical protein TERM 329 334060 - 334105 + g 87 -11.2 -4.00476 | gap 1, opp_overlap 334064, overlap 334062 TTTAACGAGTTGTTC AATAGCGCAGCGC-TGCTGGG TCATC TCCAGCGCGCGCTGCTCTATA TTTCTACTGCATTTG TERM 330 334062 - 334103 + g 93 -13.8 -3.58522 | gap 1, opp_overlap 334064, overlap 334060 TAACGAGTTGTTCAA TAGCGCAGCGC-TGCTGGG TCATC TCCAGCGCGCGCTGCTCTA TATTTCTACTGCATT Sde_0268 334615 - 334109 - | hypothetical protein Sde_0269 334917 - 334666 - | hypothetical protein Sde_0270 335172 - 335008 - | hypothetical protein TERM 331 335206 - 335233 + H 89 -3.6 -5.72053 | gap 1, opp_overlap 335206 335201 ATTTGGAAGATAAAA GTAAATTAA-GCT TTA AGCGTTAAATTAC TTTTTTGTTTGGTTC Sde_0271 335728 - 336255 + | hypothetical protein TERM 332 336513 - 336536 + F 100 -9.4 -5.71983 | opp_overlap 336513 ACTGCATAAGCGAAA CCCGGAAGGC GAGA GCCAACCGGG TTTTTTTATGGTTGA TERM 333 336536 - 336513 - f 81 -9.4 -3.80893 | opp_overlap 336513 ACTGCATAAGCGAAA CCCGGAAGGC GAGA GCCAACCGGG TTTTTTTATGGTTGA TERM 334 337132 - 337119 - g 76 -8.1 -4.10164 | overlap 337130 CTAGCATTACACAAA GCCTG AATA CAGGC TGGCAGCCACGTGTG Sde_0272 336995 - 337285 + | histidine kinase TERM 335 337330 - 337351 + F 100 -10.1 -5.46698 | opp_overlap 337330 337328 GCCTTCCGGATAATA CCCCGGCAG GAGA CTGTTGGGG TTTTTTCGTTTTGGG TERM 336 338276 - 338307 + G 79 -10.2 -3.61398 | opp_overlap 338280, overlap 338280 GATGAATGCCGTAAT CAAAGTGCTGCAAA CACA TTTGCCGCCCTTTG TTATTACGCAAGAAG TERM 337 338280 - 338303 + G 70 -5.2 -4.44667 | opp_overlap 338280, overlap 338276 AATGCCGTAATCAAA GTGCTGCAAA CACA TTTGCCGCCC TTTGTTATTACGCAA Sde_0273 337527 - 338723 + | Fis family transcriptional regulator TERM 338 339060 - 339033 - g 87 -10 -4.24745 | gap 1, opp_overlap 339033 339036 TAGTAGTAATAGAAA GCAA-CCGTGTAC GGC GTACACAGCTTGC TATTCAACTGCAAAA Sde_0274 338828 - 339121 + | hypothetical protein TERM 339 339117 - 339102 - f 70 -7.6 -3.73224 | GCAGTGGTGATCAAA CAACGT TTAT ACGTTG CTAGGGGATCTCTGA TERM 340 339127 - 339185 + F 100 -20.7 -3.64822 | opp_overlap 339137, overlap 339137 ACGTTGCTAGGGGAT CTCTGAATAACCCCAACCGTTTTTTGT CTCCC GCAAAAAGCAATTGGGGTTATTCAGAG TTTGCCTAGGCCCAT TERM 341 339175 - 339137 - f 75 -9 -3.62597 | opp_overlap 339137 339127 GGGATCTCTGAATAA CCCCAACCGTTTTTTG TCTCCCG CAAAAAGCAATTGGGG TTATTCAGAGTTTGC Sde_0275 339858 - 341009 + | SPFH domain-containing protein/band 7 family protein TERM 342 341063 - 341031 - T 86 -10.6 -3.90586 | overlap 341054 ATAGCATCGTACAAA CCCACTCTACCG AAGAAAAAA CGGTAGGGTGGG CATTGCCCACCAAAG Sde_0276 341602 - 341150 - | secretion protein HlyD Sde_0277 342260 - 342475 + | hypothetical protein TERM 343 344288 - 344272 - g 71 -3.8 -4.84311 | TTGGAGATAAGAAAA GATTTA AACAA TAAATC ACTAGAGTCCCTTAG Sde_0278 343870 - 345063 + | hypothetical protein TERM 344 345622 - 345610 - g 78 -4.7 -5.04601 | opp_overlap 345609 CTCACAAAGCAAAAA GGGCC CAA GGCTC AATTAATCCTAAAGA Sde_0279 345072 - 345722 + | hypothetical protein TERM 345 345766 - 345800 + T 100 -8 -5.30686 | opp_overlap 345764 345766 GGAAGAAAACCAAGA CAGGCAATAGTTAA AGAAATA TTAGCTATAGCCTG TTTTTTATCCCTGTT TERM 346 346182 - 346146 - T 73 -7.4 -4.22346 | opp_overlap 346146 346141, overlap 346150 TAAATGGAGCTAAAA GAAAGGGATAAATCAA GTCTT CTGAAATATCCCTTTC TTGAATTTGACGCTA Sde_0280 347433 - 346195 - | hypothetical protein TERM 347 347076 - 347088 + g 71 -3.3 -4.74103 | opp_overlap 347076 GCTTTTGATTGATAA CCGCA TAA TGCAG TTTTTGGATTGCCGA TERM 348 347621 - 347602 - R 75 -5.8 -4.66953 | GTAATATTCCAAAAA TGAATTTC CAAG GAAATCCA AGACATAGAGGAAAT TERM 349 347737 - 347771 + r 80 -3.6 -5.30686 | opp_overlap 347737 AGAAATTATCCAAGA CAGGCATGAGTTAA AGAGATC TTAGCTACTGCCTG TTTTTTATCCCTGTT Sde_0281 348890 - 347913 - | hypothetical protein TERM 350 348824 - 348810 - G 76 -4.2 -5.04175 | overlap 348812 GTAACCACACAAAAA TGCACG ACG CACGCA GCGTGAAGTGCAGTG TERM 351 349121 - 349074 - R 72 -9.5 -3.23708 | gap 1, opp_overlap 349072 349071, overlap 349072 349071 CTTTGTCAAAAATTA GGACACCCACACTTAAATAT GACTAAAGA ATAGTTAA-TGTGGGTGTCC GACTTTCTCCTCTCT TERM 352 349217 - 349251 + r 100 -8 -5.30686 | opp_overlap 349217 349215 AGGGGAAAACCAAGA CAGGCAATAGTTAA AGAAATA TTAGCTATAGCCTG TTTTTTATCCCTGTT Sde_0282 350370 - 349393 - | hypothetical protein TERM 353 350108 - 350124 + g 73 -2.2 -5.20534 | GCGCATACTTCTTTA GCGGTA AGTGC TAGCGC TTTTTGTTGGTTGAT TERM 354 350304 - 350290 - G 76 -4.2 -4.99035 | overlap 350292 GTAGCCACATAAAAA TGCACG GCG CACGCA GCGTGAAGTGCAGTG Sde_0283 351634 - 350546 - | hypothetical protein TERM 355 351584 - 351548 - G 73 -8 -4.17048 | gap 1, opp_overlap 351558 351562, overlap 351550 351551 TTGTGCTGAAAATAA TACT-GCGGTGCAGGCA GCCA CGCCTGCGCCGCTAACA ATAACGGCGTAGGGT TERM 356 351581 - 351550 - G 79 -10 -3.68435 | opp_overlap 351558 351562, overlap 351548 351551 GTGCTGAAAATAATA CTGCGGTGCAGGCA GCCA CGCCTGCGCCGCTA ACAATAACGGCGTAG TERM 357 351580 - 351551 - G 74 -11.3 -2.80579 | opp_overlap 351558 351562, overlap 351550 351548 TGCTGAAAATAATAC TGCGGTGCAGGCA GCCA CGCCTGCGCCGCT AACAATAACGGCGTA TERM 358 351558 - 351611 + g 85 -12.6 -3.36823 | gap 2, opp_overlap 351551 351550 351548, overlap 351562 AATAATACTGCGGTG CAGGCAGCCACG--CCTGCGCCGCTA ACAA TAACGGCGTAGGGTTGTGGCTGTTTG TTGCGTTTTAAAAAG TERM 359 351562 - 351607 + g 95 -12 -4.32607 | gap 2, opp_overlap 351551 351550 351548, overlap 351558 ATACTGCGGTGCAGG CAGCCACG--CCTGCGCCGCTA ACAA TAACGGCGTAGGGTTGTGGCTG TTTGTTGCGTTTTAA Sde_0284 354005 - 351651 - | hypothetical protein Sde_0285 355367 - 354273 - | hypothetical protein TERM 360 355757 - 355798 + G 86 -14.5 -2.62263 | gap 1, opp_overlap 355797 TGTTTATGTGCTTAC GC-TTCGGCGTTAGCGGCAG AAA CTGCAGCTAGCGGCGAAAGC TGCTATACAGCCGAT TERM 361 356751 - 356763 + G 76 -7.7 -4.29845 | opp_overlap 356748, overlap 356748 GCACAGAAGATATTG CCATG GGC CATGG TTTTAGGTTGCGTTA TERM 362 357063 - 357074 + G 71 -7.2 -4.05788 | AAGAGTCGGGAATGC GCGG TTAT CCGC TTTCGTTTCAGCGCG Sde_0286 355736 - 357376 + | hypothetical protein TERM 363 357798 - 357784 - g 75 -10 -3.61715 | overlap 357764 357787 TACCTGGGGTAATAA CACCTG CGG CAGGTG GCGAGCCCGCAGTGC Sde_0287 357495 - 359639 + | Outer membrane receptor proteins mostly Fe transport-like TERM 364 360371 - 360381 + G 70 -2.4 -5.01553 | opp_overlap 360371 GTAAATATATACCAA GCGG ATG CCGG TTTTATTTATAAATT TERM 365 360507 - 360484 - g 76 -4.5 -5.07567 | overlap 360486 CGATACTGTAAAAAA TAGCCCACT TACCGT AGCGGGCAA AAGCGTACTTGTCGA TERM 366 360505 - 360486 - g 71 -7.1 -4.16351 | overlap 360484 ATACTGTAAAAAATA GCCCACT TACCGT AGCGGGC AAAAGCGTACTTGTC Sde_0288 359696 - 360553 + | hypothetical protein Sde_0289 360543 - 360953 + | hypothetical protein TERM 367 360933 - 360945 + F 71 -3.3 -5.04385 | opp_overlap 360914 360928 CGTCGAGAATCGCGA GCGTC GTG GAGGC TTTTTTAGCGCTATG TERM 368 361406 - 361429 + G 71 -7.4 -3.94868 | gap 1, opp_overlap 361398 361395, overlap 361401 ATAATACCGCGCGCA GCGTGCACGTT AAC GGCGTGC-CGC TTTCGCTTTCTTCTA Sde_0290 360958 - 361668 + | response regulator receiver domain-containing protein TERM 369 362676 - 362655 - g 88 -8.7 -4.90013 | overlap 362674 CAATTTAATTAAAAA CGCGTTGCT GTAC AGCAACTCG CACATTGCAATTCGC TERM 370 362892 - 362866 - g 79 -9.4 -4.1822 | opp_overlap 362866 362864 GCGCAGTGGAATAAA TGGCAAGTAACC ATC GGTCGCTCGCCA TCTTTAGGTGGAGCT Sde_0291 361672 - 362946 + | helix-turn-helix, AraC type Sde_0292 363718 - 362987 - | short chain dehydrogenase TERM 371 363822 - 363785 - H 73 -2.7 -5.0917 | overlap 363788 TGACTAAAAAATAAA GAGCGGCAAAGTAATAA ATAC TCAATACTGTACCGATC GGTAGGTTTGATCTA TERM 372 364106 - 364130 + G 76 -4.9 -4.83615 | opp_overlap 364090 AAACCCAGCATGTAC GCTGCATTTGG CAA CAAAGAGCAGC TTTTTGTGCAGGCTA TERM 373 364272 - 364284 + G 72 -4.8 -4.56358 | opp_overlap 364272, overlap 364279 AGTGCGCAGGCGAAA CACC GCTGG GGTG TTTTGTATCCCTATG Sde_0293 363965 - 364576 + | TetR family transcriptional regulator Sde_0294 365079 - 364678 - | Fis family transcriptional regulator Sde_0295 365460 - 367514 + | secretion protein HlyD TERM 374 368604 - 368616 + G 76 -7.7 -4.24342 | CCCTGTTAACGGCTT CGGTT TTT AACCG TTTATTGCTGGGCCA Sde_0296 367514 - 368719 + | ATPase Sde_0297 368829 - 369395 + | RNA polymerase sigma factor Sde_0298 369392 - 370033 + | hypothetical protein TERM 375 370115 - 370147 + G 72 -5.6 -4.52589 | gap 1, opp_overlap 370118 370120 370121, overlap 370121 GCACTTTAGTAAATA CAATAGCCTGCGGTT TTCT AACCGCGGGTT-TAG TTTTATATGGGCCCG TERM 376 370121 - 370142 + G 95 -12.3 -4.30161 | opp_overlap 370121 370120 370118, overlap 370115 TAGTAAATACAATAG CCTGCGGTT TTCT AACCGCGGG TTTAGTTTTATATGG TERM 377 370533 - 370518 - g 87 -6.8 -5.10033 | overlap 370519 GCAAGATAAAGAAAA CGCTGC GCAA GCAGCA GAAAATAAAGCGCAG Sde_0299 370030 - 371763 + | hypothetical protein TERM 378 371826 - 371802 - T 100 -10 -5.72254 | gap 1, opp_overlap 371802 CCAAACAACAAAAAA GCCCGCAACCT ATAA AGGC-GCGGGC TCAGTTTATTGATAA TERM 379 372076 - 372100 + T 100 -12.2 -3.93398 | gap 1 TTGTCATCAGTCTGA GCCCGCAACCT ATAA AGGT-GCGGGC TTCTTCTCTATAGCT Sde_0300 372598 - 372161 - | hypothetical protein Sde_0301 373144 - 372785 - | hypothetical protein TERM 380 373268 - 373301 + r 93 -13.4 -2.74756 | opp_overlap 373272, overlap 373272 GTTTTCTCAACTTTA TATAGTCGCTAATC ACAAGC GATTAGCGACTGTA TGCTTGAGCTGATTT TERM 381 373297 - 373272 - R 93 -12.7 -2.91681 | opp_overlap 373268 373272 TCTCAACTTTATATA GTCGCTAATCA CAAG CGATTAGCGAC TGTATGCTTGAGCTG TERM 382 373272 - 373297 + r 86 -12 -3.00774 | opp_overlap 373272, overlap 373268 TCTCAACTTTATATA GTCGCTAATC ACAAGC GATTAGCGAC TGTATGCTTGAGCTG Sde_0302 373883 - 373344 - | hypothetical protein TERM 383 373599 - 373611 + g 71 -3.3 -4.82901 | ATCAATACGCGACGT CCAGT CGT ACAGG TTTTTATAGGCGGCG Sde_0303 374059 - 374442 + | hypothetical protein Sde_0304 375508 - 374546 - | putative SAM-dependent methyltransferase TERM 384 374708 - 374722 + g 84 -8.6 -4.62069 | GCCCACTTGTTGGGC GAAAGC TTG GCTTTC TTTTATCATCTTTTT Sde_0305 376949 - 375603 - | glycine cleavage system T protein TERM 385 376603 - 376626 + g 75 -9.6 -3.56366 | GATTCTGTGCGCTGT TGGCTTAACC TTGC GGCTAAGCCA TTTAAGGCGGTTATT Sde_0306 378335 - 376962 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 386 378404 - 378420 + r 71 -8.7 -3.36823 | TTGTATTATTCGTAT CTTAGCG CGT CGCTAGG TTCCATTTTAAGGGC Sde_0307 380826 - 378394 - | peptide ABC transporter permease Sde_0308 381550 - 380837 - | ABC transporter ATP-binding protein Sde_0309 382816 - 381566 - | HlyD family secretion protein TERM 387 383046 - 383028 - R 100 -16 -4.80455 | TATGTAAATAGAAAA TGGGCCGC ATT GCGGCCCA CAATAATAACTAGTT Sde_0310 384299 - 383067 - | methyl-accepting chemotaxis sensory transducer TERM 388 383392 - 383374 - G 74 -3.7 -4.95302 | GCAAATAGAATAAAA CCGCTGC AAATA GCTACGG CAAGGCTTAGGTTGG TERM 389 383927 - 383915 - G 75 -6.3 -4.39989 | AGTAAAGCATTAAAA TATCG CCG CGATA AAACAAGTGGTGTAT TERM 390 384884 - 384859 - g 70 -4.7 -4.49316 | ACTATTAATAATAAA CCAGTAACG TTTTTGCT CGATACTGG CGCTACCGATGTGGC Sde_0311 384631 - 385155 + | hypothetical protein TERM 391 385273 - 385287 + G 73 -4.2 -4.82901 | overlap 385286 ACTTTGAACAATGCC GCGCAA ATA TTCCGC TTTTTATAAAAAAAC TERM 392 385815 - 385832 + G 72 -6.3 -4.24413 | gap 1, opp_overlap 385814 385815 GGTGTGTGGGTAAAG CTGCGTGC ACA GCA-GCAG TTCTTTCTTGGTGAG Sde_0312 385179 - 386141 + | hypothetical protein Sde_0313 386252 - 386518 + | HAD family hydrolase TERM 393 386780 - 386744 - f 83 -11.1 -3.41422 | opp_overlap 386752, overlap 386736 386745 386748 386752 AAAATAAGTTCACAA GTTACATACGTATTCAA TGG TTGAATACGTATGTAGG CGGCGTCTGCGTCAC TERM 394 386779 - 386745 - f 100 -14.6 -2.63769 | opp_overlap 386752, overlap 386744 386736 386748 386752 AAATAAGTTCACAAG TTACATACGTATTCAA TGG TTGAATACGTATGTAG GCGGCGTCTGCGTCA TERM 395 386776 - 386748 - f 100 -16.3 -2.60555 | opp_overlap 386752, overlap 386745 386744 386736 386752 TAAGTTCACAAGTTA CATACGTATTCAA TGG TTGAATACGTATG TAGGCGGCGTCTGCG TERM 396 386752 - 386772 + F 81 -11.3 -2.87344 | opp_overlap 386748 386745 386744 386736 386752 TTCACAAGTTACATA CGTATTCAA TGG TTGAATACG TATGTAGGCGGCGTC TERM 397 386772 - 386752 - f 83 -11.3 -2.96711 | opp_overlap 386752, overlap 386748 386745 386744 386736 TTCACAAGTTACATA CGTATTCAA TGG TTGAATACG TATGTAGGCGGCGTC Sde_0314 387021 - 388955 + | hypothetical protein TERM 398 388990 - 388971 - f 70 -5.8 -4.32678 | overlap 388968 TCGGCAAATAAACAA GTTAGCTA GCTC TAACTAAC CTAAAGCTGCTGTTA TERM 399 390973 - 390933 - g 75 -9.8 -3.61654 | gap 1, overlap 390934 TATATTTAGCGTAAA CGGCAAGCCCT-TTGGCGA AGCG CCGCCAAGAGAGCTTACCC TAAATACCGCAGAAA TERM 400 390972 - 390934 - g 82 -13.3 -2.76671 | gap 1, overlap 390933 ATATTTAGCGTAAAC GGCAAGCCCT-TTGGCGA AGCG CCGCCAAGAGAGCTTACC CTAAATACCGCAGAA Sde_0315 389554 - 391263 + | phosphoenolpyruvate-protein phosphotransferase TERM 401 391375 - 391359 - g 76 -8.7 -4.07562 | CAAATTTTAGATAAA GCCTATG CTG CACAGGC TATCCCTAGCTATCA TERM 402 392313 - 392301 - g 72 -2.7 -5.03715 | ATTATTGTTAAAAAA TTAGA AGA CCTAA ACCCACTTTGGTATA TERM 403 392432 - 392405 - g 73 -4.2 -4.84602 | gap 1 AGATAAAGAAACAAA CAAACCAAT-CCC TGT GGATAATGGTTTG CGCGGCTTCCATCAC Sde_0316 391275 - 393347 + | prolipoprotein diacylglyceryl transferase TERM 404 393692 - 393682 - g 80 -5.4 -4.96646 | GCAGACAAGTAAAAA TTGG CGA CCAA ATTCAAGGGGTAACG Sde_0317 393393 - 395696 + | hypothetical protein TERM 405 395746 - 395773 + G 95 -13.4 -3.66178 | ACGTGTGTGTAATTG GCGGTGGCCCAG CGGG TTTGGCCACCGC TTTACAATTGCGCGC TERM 406 395950 - 395984 + G 70 -5.2 -4.40333 | gap 2, opp_overlap 395978, overlap 395978 GTGCTGGTGTGTCGA GTTGTTGG-G-GTTCT AGCCA AGAACACACCAACGAC TTTCTGTTGTTTCCG Sde_0318 395703 - 397151 + | dehydrogenases (flavoproteins)-like Sde_0319 397183 - 397782 + | hypothetical protein Sde_0320 397816 - 398502 + | putative transcription regulator protein TERM 407 398549 - 398522 - T 100 -14.4 -3.89448 | opp_overlap 398527, overlap 398515 398527 GTTAAAAATAGACAA TTAAACGCAGTA ATTA TACTGCGTTTAA TAATGAGTATGTGGC TERM 408 398527 - 398544 + T 84 -9.9 -3.80014 | opp_overlap 398522 398515 398527 AAATAGACAATTAAA CGCAGTA ATTA TACTGCG TTTAATAATGAGTAT TERM 409 398544 - 398527 - T 88 -9.9 -4.08872 | opp_overlap 398527, overlap 398522 398515 AAATAGACAATTAAA CGCAGTA ATTA TACTGCG TTTAATAATGAGTAT Sde_0321 398858 - 398574 - | hypothetical protein TERM 410 399096 - 399118 + r 100 -16.4 -4.89852 | opp_overlap 399096 ATTGCGTTAAAAAAA TATGGCGTCG TTG CGACGCCATA TTTTTGTAAATGTAA TERM 411 399118 - 399096 - R 100 -16.4 -5.40474 | opp_overlap 399096 ATTGCGTTAAAAAAA TATGGCGTCG TTG CGACGCCATA TTTTTGTAAATGTAA TERM 412 399123 - 399153 + r 77 -6.4 -4.70266 | opp_overlap 399129, overlap 399124 399125 399129 GCGACGCCATATTTT TGTAAATGTAAAAT ATT ATTTTACATTTAGG TTTTTAGGTGCTGTT TERM 413 399125 - 399151 + r 76 -11.2 -2.63922 | opp_overlap 399129, overlap 399124 399123 399129 GACGCCATATTTTTG TAAATGTAAAAT ATT ATTTTACATTTA GGTTTTTAGGTGCTG TERM 414 399129 - 399147 + r 74 -7.6 -4.00407 | opp_overlap 399129, overlap 399125 399124 399123 CCATATTTTTGTAAA TGTAAAAT ATT ATTTTACA TTTAGGTTTTTAGGT Sde_0322 400628 - 399174 - | hypothetical protein Sde_0323 401230 - 403242 + | TonB-like TERM 415 403258 - 403290 + F 100 -18.7 -4.33928 | opp_overlap 403253 403252 CCCTTAAAACTGCCA GCCGCTATTAAAACA ACG TGTTTTAGTAGCGGC TTTATATTTAACGTA TERM 416 404554 - 404536 - g 71 -7.4 -3.87869 | CCAACGTGGCAGAAA TAGCCTAC TCG GTGGGCTA TAACAATGTATCGTA Sde_0324 403488 - 404639 + | AraC family transcriptional regulator Sde_0325 404856 - 406211 + | dihydroxy-acid dehydratase Sde_0326 407647 - 406295 - | response regulator receiver domain-containing protein TERM 417 406446 - 406427 - G 74 -3.6 -5.03314 | opp_overlap 406429, overlap 406429 TTTAGTGGTAAAAAA TGGAACAA AAAT TTGTTCTA TTAAATCCGTCGCTA Sde_0327 409148 - 407637 - | response regulator receiver domain-containing protein TERM 418 408295 - 408307 + g 72 -10.5 -2.83403 | opp_overlap 408292, overlap 408294 TCTAAAAAAAGTGTA CCGCC ATC GGCGG CTTTAATACGCCCAA Sde_0328 409270 - 410574 + | ABC transporter permease TERM 419 410951 - 410929 - g 76 -4.8 -4.83722 | opp_overlap 410935, overlap 410931 AACAGTAGAAGAAAA TATAGAGCTG GCA CTGCTCTATC ACAAAATTCCAGTTG TERM 420 410949 - 410931 - g 73 -7.4 -4.02119 | opp_overlap 410935, overlap 410929 CAGTAGAAGAAAATA TAGAGCTG GCA CTGCTCTA TCACAAAATTCCAGT Sde_0329 410621 - 411301 + | putative ABC transport system, ATP-binding protein Sde_0330 411311 - 413818 + | acetylornithine deacetylase ArgE TERM 421 413848 - 413873 + F 100 -14.1 -5.14163 | GTAATATGTTTTATT GCCAGCCTGTA TGTA TATAGGCTGGC TTTTTATTACTAAAT TERM 422 413911 - 413901 - f 91 -6.8 -5.52347 | AATAAAACTAAAAAA GGGT TGC ACCC ATAAAAAACCTTGGT TERM 423 414597 - 414570 - g 74 -7 -4.26019 | CAATTAGATGTAAAA CCCAAGCAAATA AAAA TAGATGCTTGGG AGAAACGCTTAATAG Sde_0331 414273 - 415505 + | hypothetical protein Sde_0332 415508 - 416254 + | putative peptide chain release factor Sde_0333 416748 - 417725 + | Type I secretion outer membrane protein, TolC Sde_0334 418539 - 418075 - | hypothetical protein Sde_0335 419952 - 418552 - | phosphomethylpyrimidine kinase TERM 424 419407 - 419427 + g 78 -5.4 -4.87665 | overlap 419408 TTGTTTCCGTAATTT TTCGGCTA GCGTG TGGCCGAG TTTTTCTGACTGGCC TERM 425 420340 - 420315 - R 82 -10.5 -3.67597 | opp_overlap 420339, overlap 420316 GTTTGGACGGAAGAA TCCAAAAAGCC TAAG GGCTTTTTGGC CCCTGCGGGCTCAGA TERM 426 420339 - 420316 - R 95 -14 -2.80344 | overlap 420315 TTTGGACGGAAGAAT CCAAAAAGCC TAAG GGCTTTTTGG CCCCTGCGGGCTCAG TERM 427 420362 - 420391 + r 77 -10.7 -2.78073 | overlap 420339 420362 420363 420382 GGGCTCAGAGTGGCC CGCGAAGCGCTTT GGCC AGCGCGCTTTGCG CTTGTTCAAAATGCT TERM 428 420382 - 420392 + r 73 -8.2 -3.63991 | overlap 420362 420363 420362 AGCGCTTTGGCCAGC GCGC TTT GCGC TTGTTCAAAATGCTG TERM 429 420647 - 420594 - R 100 -23.5 -3.05816 | opp_overlap 420606 420611, overlap 420611 TCATCCGCGACCGAA CCCCATCCAAAAAAAAAGCCCAGCA TTTC TGCTGAGCTTTTGTTTTGGATGGTG CCCGGTCGCGGAATC TERM 430 420606 - 420635 + r 76 -7.9 -4.21194 | opp_overlap 420594 420611, overlap 420611 GAACCCCATCCAAAA AAAAAGCCCAGCA TTTC TGCTGAGCTTTTG TTTTGGATGGTGCCC TERM 431 420611 - 420630 + r 95 -7.8 -5.10933 | opp_overlap 420611 420594, overlap 420606 CCATCCAAAAAAAAA GCCCAGCA TTTC TGCTGAGC TTTTGTTTTGGATGG TERM 432 420630 - 420611 - R 100 -10 -6.11644 | opp_overlap 420606 420611, overlap 420594 CCATCCAAAAAAAAA GCCCAGCA TTTC TGCTGAGC TTTTGTTTTGGATGG TERM 433 420676 - 420692 + r 76 -10.9 -2.62616 | opp_overlap 420666 420669, overlap 420666 TCGAACCACGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA Sde_0336 421065 - 420793 - | hypothetical protein Sde_0337 422129 - 421062 - | A/G-specific DNA-adenine glycosylase TERM 434 422435 - 422452 + G 73 -7.7 -4.04579 | opp_overlap 422434 GAGCATCAAAAAGTG CGTACCG ATGC CGGTATG TTTGATGTTTCTCAC TERM 435 422795 - 422778 - g 75 -6.3 -4.4009 | gap 1, opp_overlap 422777 CTGCACGCGAGAAAA CGGCGCAA ATT TTGC-CCG AATTGTTAACTATGG Sde_0338 422315 - 423406 + | glycine-cleavage system protein T1 Sde_0339 423617 - 424009 + | glycine cleavage system protein H1 TERM 436 424041 - 424055 + T 100 -8.5 -5.42259 | opp_overlap 424041 424040 TGTAGTACTTAAAAG CCGGC TATAT GCCGG TTTTTTTGCGCGTAA TERM 437 424126 - 424101 - T 100 -14.1 -5.45802 | opp_overlap 424101 GCCGCAAAACAAAAA GGCTTGAGACG TTGC CATCTCAAGCC TTTTTTAGTGCCTTT TERM 438 424101 - 424126 + T 100 -11.9 -5.19261 | opp_overlap 424101 GCCGCAAAACAAAAA GGCTTGAGACG TTGC CATCTCAAGCC TTTTTTAGTGCCTTT Sde_0340 424580 - 424155 - | hypothetical protein Sde_0341 425788 - 424592 - | topoisomerase IV, subunit B TERM 439 425960 - 425942 - R 71 -4.6 -4.74103 | opp_overlap 425942 GTGTTAATGGAAAAA GCTCAA TTGCGGT TTGAGC TTTGTAAAAGCCGTG Sde_0342 426454 - 426038 - | hypothetical protein Sde_0343 428168 - 426525 - | methyl-accepting chemotaxis sensory transducer TERM 440 426892 - 426914 + g 77 -11.3 -3.14564 | gap 1 GCTGTAGATTCTTGT GTGCGCGAGG CTAG CC-CGCGCAC TTCATCGGCCACTAC Sde_0344 429203 - 428328 - | putative signal transduction protein Sde_0345 430371 - 429292 - | imelysin Sde_0346 431124 - 430468 - | XRE family transcriptional regulator Sde_0347 431314 - 431826 + | (di)nucleoside polyphosphate hydrolase, putative Sde_0348 431820 - 434090 + | phosphoenolpyruvate-protein phosphotransferase PtsP Sde_0349 434257 - 435081 + | prolipoprotein diacylglyceryl transferase TERM 441 435479 - 435469 - g 73 -2.4 -5.26158 | overlap 435470 435471 CAAATAAAAAATAAA CCCG ACT CGCG TCGCCATATTATTTC Sde_0350 435103 - 435936 + | thymidylate synthase Sde_0351 435948 - 436463 + | dihydrofolate reductase TERM 442 436545 - 436517 - f 75 -8.9 -3.68725 | opp_overlap 436523, overlap 436515 AATTTTTAAGAAATA GCGAATGTGTGAT CTA ACCACACTTTCAC CTAAGCCTAATTAAT TERM 443 437037 - 437021 - g 73 -9.5 -3.40141 | opp_overlap 437018, overlap 437011 437034 CAAAACCGTAAGCAA GCAAATC GAA GATTTGC GCGTTTACAACGCTC TERM 444 437530 - 437517 - g 72 -6.7 -4.20696 | overlap 437509 437525 437527 GCAGCAATCTTAAAA GCGAT TAAG ATCGC TCGTAAACAAGCGAC Sde_0352 436812 - 437594 + | TonB system biopolymer transport component Sde_0353 437591 - 438973 + | TonB system biopolymer transport component TERM 445 439419 - 439388 - g 72 -9.4 -3.53012 | TCGGGTGTTTCCAAA GCAACTATCCCCAC TATG GCGGGCATGGTTGC AGCACTTTCCGGAGT Sde_0354 438986 - 439513 + | Lipid A export ATP-binding/permease protein MsbA Sde_0355 439547 - 439951 + | branched-chain amino acid aminotransferase I Sde_0356 439959 - 440558 + | periplasmic protein TonB TERM 446 440877 - 440857 - g 72 -4.7 -4.56597 | CCCGCTGCCGAAAAA CTTCTCAAC TCT ATGGAGAAG AAGTGTAAAGATAAG TERM 447 441105 - 441085 - g 91 -6.1 -5.4588 | opp_overlap 441086, overlap 441086 GAAAACTACAAAAAA GCGATCCAT TAC ATGGACCGT TACATGAATACTGTA TERM 448 441104 - 441086 - g 80 -9.6 -3.85088 | opp_overlap 441086, overlap 441085 AAAACTACAAAAAAG CGATCCAT TAC ATGGACCG TTACATGAATACTGT TERM 449 441928 - 441916 - g 77 -3.3 -5.1417 | opp_overlap 441916 441919 GTAGAAAATGAAAAA GATCG TTA CGAGC GTTTAGCTGAGTTTT Sde_0357 440614 - 441954 + | putative PAS/PAC sensor protein TERM 450 441979 - 441995 + T 100 -9.4 -5.64274 | opp_overlap 441979 AAGCATTATATAGAA GGGGCT TTTAT AGCCCC TTTTTTTATGGGTAA TERM 451 441995 - 441979 - T 78 -9.4 -3.63018 | opp_overlap 441979 AAGCATTATATAGAA GGGGCT TTTAT AGCCCC TTTTTTTATGGGTAA TERM 452 442082 - 442068 - T 100 -8.5 -5.14563 | opp_overlap 442060 442068 GCGGGTATTAAAAAA GGGCC GCTTG GGCCC TTTAAGAATTTAGTA TERM 453 442068 - 442082 + T 73 -8.5 -3.64682 | opp_overlap 442068, overlap 442060 GCGGGTATTAAAAAA GGGCC GCTTG GGCCC TTTAAGAATTTAGTA Sde_0358 443956 - 442112 - | dihydroxy-acid dehydratase Sde_0359 445801 - 444119 - | putative PAS/PAC sensor protein TERM 454 445153 - 445165 + g 81 -3.3 -5.4505 | CCATGCCGAGTTTTG CCCAT ATG AGGGG TTTTTTGTTGAGCAC Sde_0360 447271 - 445952 - | N-acetylglutamate synthase TERM 455 446582 - 446602 + g 85 -12.7 -3.35798 | opp_overlap 446581 446580 446579 ATCCACCAAAAATTT CTCACACTT GAT AAGTGTGAG TTCTCGGTAGCGACT Sde_0361 448021 - 447383 - | TetR family transcriptional regulator TERM 456 448669 - 448657 - g 71 -7.7 -3.86015 | GAGGGTGGCGATAAA CCAAC TTT GTTGG GCGGCGCGATTACCT Sde_0362 448189 - 448866 + | glutathione S-transferase-like protein Sde_0363 450067 - 448904 - | acetylornithine deacetylase TERM 457 449854 - 449886 + g 76 -12.1 -2.57132 | opp_overlap 449835, overlap 449853 CAGGGCCAGTGCCCC GCGTTGCCAGTAAAT TGT ATTTACCGGCAAAGC CTTCTACCGGCAAAA Sde_0364 450196 - 451974 + | putative secretion pathway ATPase TERM 458 452890 - 452853 - g 77 -11.5 -3.16117 | opp_overlap 452858 452861, overlap 452858 452861 ATACGCAACCTAATA CCAAACAACTTCGATGC GAAC ACACCGAAGTTGTTTAA GGAAGTAGGGGTGGA TERM 459 452885 - 452858 - g 87 -11.4 -3.94853 | opp_overlap 452858 452861, overlap 452853 452861 CAACCTAATACCAAA CAACTTCGATGC GAAC ACACCGAAGTTG TTTAAGGAAGTAGGG TERM 460 452882 - 452861 - g 71 -7.3 -4.08853 | opp_overlap 452858 452861, overlap 452858 452853 CCTAATACCAAACAA CTTCGATGC GAAC ACACCGAAG TTGTTTAAGGAAGTA Sde_0365 452061 - 452936 + | topoisomerase IV, subunit A Sde_0366 454343 - 452979 - | putative secretion protein Sde_0367 454920 - 454504 - | hypothetical protein TERM 461 454762 - 454781 + g 70 -5 -4.38927 | overlap 454760 AACCGGTGGCGTGCG CACGCT TGGGGTGT AGCGTG TTTCTTCTATGCCGG TERM 462 455573 - 455541 - g 71 -3.4 -4.83615 | gap 2, opp_overlap 455540 455548, overlap 455542 455543 TAGGTGCCATAAAAA TTGGCA-TG-CTCGGC CAC GCCGAGGCATTGCCCG CTGTGGTGAGCTTTG TERM 463 455571 - 455543 - g 71 -10.4 -2.6933 | gap 2, opp_overlap 455540 455548, overlap 455542 455541 GGTGCCATAAAAATT GGCA-TG-CTCGGC CAC GCCGAGGCATTGCC CGCTGTGGTGAGCTT TERM 464 455548 - 455584 + G 71 -8 -3.86015 | gap 2, opp_overlap 455543 455542 455541, overlap 455540 CATAAAAATTGGCAT GCTCGGCCACGCCGAGGC ATT GCC-CGCTGTGG-TGAGC TTTGTGCAGCAGCTA TERM 465 455891 - 455901 + G 73 -2.4 -5.1356 | overlap 455886 TTAGTTACCCCGCAT GGCG AAG CGCG TTTTTCTTCCTCCAA Sde_0368 455300 - 456148 + | phosphomethylpyrimidine kinase TERM 466 457353 - 457367 + G 80 -6.4 -4.87133 | opp_overlap 457353 TGCGAAATTATGAAA GCTTAC GAT GTGAGC TTTTCTTTGGGGGAT Sde_0369 456219 - 458135 + | thiamine biosynthesis protein ThiC TERM 467 458208 - 458175 - f 72 -9.5 -3.19789 | gap 1, overlap 458142 458156 458177 ACAGCTAACAGCTAA CAGCG-ATTGCGGGGC TTG GCCCCGCAAAACACAG TGGATAAATAATGGA TERM 468 458206 - 458177 - f 79 -10.7 -3.1577 | gap 1, overlap 458142 458156 458175 AGCTAACAGCTAACA GCG-ATTGCGGGGC TTG GCCCCGCAAAACAC AGTGGATAAATAATG Sde_0370 458219 - 458836 + | ADP-ribose pyrophosphatase Sde_0371 458900 - 459460 + | histidine kinase TERM 469 459635 - 459659 + G 84 -10.8 -3.95036 | gap 1 ACCCGGTGAGCTTAT GCTC-GGTCTG GATA CAGACCAGAGC TTATTTGACGTGCTT Sde_0372 459540 - 460355 + | icc protein Sde_0373 460400 - 460990 + | DNA repair protein RadA TERM 470 461018 - 461000 - f 71 -4.6 -4.73633 | opp_overlap 461000 461002 CAATAATATAGAAAA TAGACATA CTC TATGGCTA ATTATTCAGCAGAAG TERM 471 461214 - 461198 - g 75 -9.5 -3.50335 | overlap 461194 461192 CTGCATAAAGATCAA TCGGTAA CCG TTACCGA CGATGGCCGCGGTAT Sde_0374 461012 - 462907 + | DNA topoisomerase IV subunit B TERM 472 462955 - 462976 + T 100 -5.8 -5.79595 | opp_overlap 462947 462945 462955, overlap 462947 GCTAACAGCGCGAAA GCACGCTT ATTAGG GGGCGTGC TTTTTTATTTTAAAA Sde_0375 464143 - 462995 - | hypothetical protein Sde_0376 466628 - 464145 - | cis/trans isomerase TERM 473 464183 - 464199 + g 76 -2.3 -5.43866 | overlap 464185 AGTCTAGTAGTCCGC TAGAAAT TGG GTTTCTG TTTTTTTCGGAATTA TERM 474 464977 - 464962 - G 72 -4.8 -4.62054 | CGAATTAAATCAAAA TACAAA CGTG TTTGTA ACTGATGTGACACGT Sde_0377 467267 - 467004 - | hypothetical protein Sde_0378 467598 - 467353 - | hypothetical protein Sde_0379 468173 - 467619 - | transcriptional regulator Sde_0380 468285 - 469025 + | ATPase TERM 475 469404 - 469414 + G 74 -5.4 -4.60924 | GGTGAAGGTTGTAGA TCAC AAG GTGA TTTTTACAGGGTTTG TERM 476 470033 - 470018 - g 82 -3.2 -5.59564 | overlap 470019 ACAAATCCAAAAAAA CCGCAT TTGT ATGCGT ACAAAACATAGAAAA Sde_0381 469105 - 470136 + | hypothetical protein Sde_0382 470843 - 470190 - | hypothetical protein Sde_0383 471287 - 470874 - | ATPase Sde_0384 473462 - 471723 - | hypothetical protein TERM 477 472434 - 472445 + g 75 -3 -5.21709 | TAAGCGCTCGGTGGG CAAA AAAG TTTG TTTTTTCATATAGCG TERM 478 473568 - 473613 + r 71 -8.3 -3.45839 | gap 1, opp_overlap 473572 473577, overlap 473571 TTGCTGACGCGAAAT AAAACGAAATTTGGAGTGGCCC TGC GGGCCACTCCAAATA-CGATGA TTGCTATTTCAGCGT TERM 479 473571 - 473610 + r 100 -14.4 -2.8742 | gap 1, opp_overlap 473572 473577, overlap 473568 CTGACGCGAAATAAA ACGAAATTTGGAGTGGCCC TGC GGGCCACTCCAAATA-CGA TGATTGCTATTTCAG TERM 480 473609 - 473572 - R 100 -17.9 -4.88918 | gap 1, opp_overlap 473571 473568, overlap 473577 TGACGCGAAATAAAA CGAAATTTGGAGTGGCCC TGC GGGCCACTCCAAATA-CG ATGATTGCTATTTCA TERM 481 473605 - 473577 - R 100 -21.9 -4.37871 | opp_overlap 473571 473568, overlap 473572 CGAAATAAAACGAAA TTTGGAGTGGCCC TGC GGGCCACTCCAAA TACGATGATTGCTAT Sde_0385 475537 - 473642 - | putative cell surface protein TERM 482 474835 - 474848 + g 76 -4.5 -5.01546 | TATCTACGCTCCACT CACCG GTGC TGGTG TTTTTGTCTAGCTTT TERM 483 475205 - 475189 - G 72 -5.1 -4.72986 | opp_overlap 475201, overlap 475194 TACCGTGATCAAAAA CAATACC GTT GGCATCG GCTTCGGTGTTACTG Sde_0386 477126 - 475843 - | 3-deoxy-D-manno-octulosonic-acid (KDO) transferase Sde_0387 478987 - 477227 - | lipid A ABC transporter, ATP-binding/permease protein TERM 484 479043 - 479059 + r 73 -7.2 -4.10188 | opp_overlap 479043, overlap 479056 GGGGGGAATAAAAAA GGCGGT CAAGC GCCGCC TTTGGTGTTTTACTT TERM 485 479059 - 479043 - R 91 -6.5 -5.4505 | opp_overlap 479043 479056 GGGGGGAATAAAAAA GGCGG TCAAGCG CCGCC TTTGGTGTTTTACTT Sde_0388 479998 - 479069 - | branched-chain amino acid aminotransferase TERM 486 479266 - 479278 + g 79 -2.6 -5.34309 | opp_overlap 479241, overlap 479241 CTACGTACACTTCGT CGCG GGTGA TGCG TTTTTCTTTAATGGT Sde_0389 483040 - 480101 - | glutamate-ammonia-ligase adenylyltransferase TERM 487 480503 - 480516 + g 70 -2.3 -5.00616 | TACATCTTTGCGCAG GGGGG CGAG CTCTC TTTTTTGCCCCAAAA TERM 488 485165 - 485155 - g 72 -3.2 -4.99861 | TAGGAATTAGAAAAA TAGC GAC GCCA AACGGTTATAAGTGG Sde_0390 483312 - 487139 + | ligand-binding sensor domain-containing protein TERM 489 487227 - 487178 - T 72 -9.4 -3.15708 | gap 2, opp_overlap 487180 487181, overlap 487180 487194 AGAGAGTACAGTTAA CAGGGGGTACAGAGAACAGCGTGC GTGC GCACACCGCCTTCTGT-CCCC-TG TCCCCCGTTTCCTGT TERM 490 487233 - 487180 - T 72 -9.6 -3.13566 | opp_overlap 487180 487181, overlap 487178 487194 AGAGTACAGTTAACA GGGGGTACAGAGAACAGCGTGC-GTG CGCA CACCGCCTTCTGTCCCCTGT-CCCCC GTTTCCTGTTCCCTA TERM 491 487213 - 487194 - T 70 -7.8 -3.58905 | opp_overlap 487181 487180, overlap 487178 487180 AGGGGGTACAGAGAA CAGCGTGC GTGC GCACACCG CCTTCTGTCCCCTGT TERM 492 487276 - 487299 + T 100 -12.4 -5.42265 | opp_overlap 487276 TAAGATATGAAAAAA GGCGCGGCAT TTAG ATGCGGCGCC TTTTTTATGGTTTGC TERM 493 487299 - 487276 - T 100 -12.4 -5.27399 | opp_overlap 487276 TAAGATATGAAAAAA GGCGCGGCAT TTAG ATGCGGCGCC TTTTTTATGGTTTGC Sde_0391 488834 - 487335 - | methyl-accepting chemotaxis sensory transducer Sde_0392 490111 - 489152 - | diguanylate cyclase TERM 494 489219 - 489205 - G 74 -8.5 -3.85698 | TTTTGGCTTGATAAA GCGCC TTATC GGCGC AGTCTATCCACGCTG TERM 495 489564 - 489574 + g 71 -6.8 -4.07455 | CAAGGGTGTTCGTGT CGCT TAA AGCG TTTGTACTCTTGCTC Sde_0393 490756 - 490145 - | CheC, inhibitor of MCP methylation Sde_0394 490917 - 491564 + | putative metallo-beta-lactamase family protein Sde_0395 491640 - 492023 + | hypothetical protein Sde_0396 492382 - 492035 - | hypothetical protein Sde_0397 493272 - 492538 - | ribosomal protein serine acetyltransferase TERM 496 493183 - 493203 + g 72 -8.2 -3.70037 | opp_overlap 493175 GCTAATATTGCCGGC GCCCTGCC AATCG GGCACGGC TTTACCTAGTGCTTG TERM 497 493394 - 493380 - H 75 -7.1 -4.4017 | GCAACGGGTATAAAA GGCGA GATAT TCGCC AACAAGCCATCATAA TERM 498 494305 - 494288 - g 74 -5.5 -4.63184 | overlap 494276 494289 AATGCAGGCTAAAAA GCTGCCA ATGG TGGCAGA CTTGCGCGATGAATC TERM 499 494304 - 494289 - g 70 -9 -3.37188 | overlap 494276 494288 ATGCAGGCTAAAAAG CTGCCA ATGG TGGCAG ACTTGCGCGATGAAT TERM 500 494993 - 494976 - g 71 -3.4 -4.82901 | gap 1 GTGCTTTCAGAAAAA GGCTGGA TACGC TCC-GCC AAGGGTCACGAAATG Sde_0398 493437 - 495683 + | DNA topoisomerase IV subunit A TERM 501 495736 - 495756 + F 100 -9.8 -5.75342 | AGTTTTTTATTTGAA GCGAACAA AATTC TTGTTCGC TTTTTTTTGACCAAG TERM 502 495837 - 495813 - f 75 -2.2 -5.2696 | gap 1 TTAAAATGTAAAAAA CGCAATGCGAA ACGG TTGGCATT-CG AGAAATATCAGCGTC Sde_0399 496045 - 496305 + | hypothetical protein Sde_0400 497126 - 496347 - | bax protein, putative TERM 503 496539 - 496558 + g 72 -5.6 -4.4267 | GTTGCGCAGGTAGGC GTCCACCG AACC CGCTGGGC TTTTAAATTTTCGCA TERM 504 497171 - 497189 + r 100 -11.8 -5.06816 | TATTGGTTTATTTTA GGCAGTAA TCA TTACTGCC TTTTTGTTCGCAAGT Sde_0401 497776 - 497246 - | hypothetical protein Sde_0402 498983 - 497829 - | hypothetical protein TERM 505 499348 - 499380 + G 72 -5.5 -4.43681 | opp_overlap 499359 TGCCAAAACGACTCC TAAGCATGAAAGCTG TTG CAGCTGCCCTGCTTG TTTTAGTGTTGGGTG Sde_0403 499317 - 500303 + | ABC-type nitrate/sulfonate/bicarbonate transport system protein TERM 506 500452 - 500442 - g 76 -2.4 -5.37043 | opp_overlap 500442 AGCTCACACAAAAAA GTGC CGT GCGC TTAGCTAATTTACTG Sde_0404 500303 - 501799 + | Signal transduction histidine kinase-like Sde_0405 501893 - 502399 + | hypothetical protein TERM 507 503183 - 503170 - g 72 -5.2 -4.72272 | opp_overlap 503160 GCGCGGCAGTAAAAA CCGC TTTGGC GCGG TGAACGAGCTGGGGG Sde_0406 502403 - 503767 + | DNA repair protein RadA TERM 508 503773 - 503831 + T 100 -17.9 -3.05384 | opp_overlap 503773, overlap 503781 AGCCATTTAGAACAA TCGTTAAATGCTAATTGCTAATCTCTA ATGTC TAGTCATTAGCAATTAGCGTTTAGCGA TTGAGTCACGGCGAC TERM 509 503831 - 503773 - T 100 -14.2 -3.82378 | opp_overlap 503773 503781 AGCCATTTAGAACAA TCGTTAAATGCTAATTGCTAATCTCTAA TGT CTAGTCATTAGCAATTAGCGTTTAGCGA TTGAGTCACGGCGAC TERM 510 503781 - 503823 + T 80 -10.1 -3.61268 | opp_overlap 503773, overlap 503773 AGAACAATCGTTAAA TGCTAATTGCTAATCTCTA ATGTC TAGTCATTAGCAATTAGCG TTTAGCGATTGAGTC Sde_0407 504199 - 503837 - | hypothetical protein Sde_0408 504572 - 504210 - | hypothetical protein TERM 511 505023 - 505011 - g 93 -10.5 -4.59853 | TGAAGTGTGGAAAAA CGGCG CCA CGCCG GGTAAACGCAGCATG Sde_0409 504772 - 505467 + | RDD TERM 512 506381 - 506404 + G 77 -6.8 -4.43208 | opp_overlap 506381 CTGGTCGTCCAATAA TATTCTTGCC CCTT GGCAAAAATA TTTATTTGGGGGTGT TERM 513 506404 - 506381 - g 72 -9 -3.61398 | opp_overlap 506381 CTGGTCGTCCAATAA TATTCTTGCC CCTT GGCAAAAATA TTTATTTGGGGGTGT Sde_0410 505464 - 506492 + | hypothetical protein TERM 514 506946 - 506956 + G 77 -6.8 -4.37554 | opp_overlap 506946 CCGCTTTTTGGATAA CCCT TTT AGGG TTTATCTTTGAGTTT Sde_0411 506489 - 508108 + | hypothetical protein TERM 515 508644 - 508655 + G 74 -5.8 -4.59109 | AAGCAACGCAGATTC CCCT TTGA AGGG TTTTTAAAGGATATA TERM 516 508939 - 508923 - g 85 -6.6 -5.19328 | AGCGTAGAAGAAAAA TCTGAC GCAAA GTCAGA TGAAAAGCCAGACGA TERM 517 509320 - 509343 + G 77 -8.8 -3.96068 | gap 1, opp_overlap 509319 CGGCGTTAAGCGAAG CCGC-GTGGCA ATT TGCCCCTGCGG TTGTTATTGGGCTAA TERM 518 509456 - 509471 + G 78 -6 -4.82901 | TTTTGCCGAGCACTT GCGCGC CCAC GCTCGC TTTTTATGGCGCAAG Sde_0412 508101 - 509720 + | hypothetical protein TERM 519 510407 - 510387 - g 70 -2.5 -5.02074 | overlap 510388 CCAGCTTGCAAAAAA TTGCCACAA AAA TTGTGGTAG ACGATGAAGTGTTGG TERM 520 510591 - 510602 + G 74 -5.8 -4.67982 | overlap 510587 TTTACATTGCAGCGC TGCG CCAC CGCA TTTTATTGGCTGCCG Sde_0413 509717 - 510694 + | methanol dehydrogenase regulatory protein TERM 521 510794 - 510805 + G 71 -3.6 -4.82901 | TTGCCATCTAAATTG GCGG TAGG CTGC TTTTTATGGGGCGGC TERM 522 510874 - 510913 + G 79 -2.3 -5.5074 | gap 2, opp_overlap 510879 510882, overlap 510879 AGAAATAGAATCTAT TGAAAGCAGCGT--AACCA CGTT TGGTTTTGCGCTGCTGTTA TTTTTTGTTGGCTTA Sde_0414 510734 - 512110 + | hypothetical protein TERM 523 512171 - 512188 + T 100 -12.7 -5.28826 | opp_overlap 512171 TCTTAGCGTCTGAAA GCCCAGC TTGT GCTGGGC TTTTTTGTGGAGTTT TERM 524 512188 - 512171 - T 100 -12.7 -3.54424 | opp_overlap 512171 TCTTAGCGTCTGAAA GCCCAGC TTGT GCTGGGC TTTTTTGTGGAGTTT Sde_0415 512765 - 512205 - | hypothetical protein TERM 525 513032 - 513022 - R 79 -3.2 -5.34555 | CTAGAGGACAAAAAA GCCT GAA AGAC AAAAAGCTGTTGGGG TERM 526 513067 - 513081 + r 71 -5 -4.6902 | opp_overlap 513069, overlap 513071 TCAGAGGTTCCTACA TATTGC GCT GCAGTA TTTTTAGGGTTGTAA TERM 527 513071 - 513121 + r 95 -12.9 -3.21416 | gap 1, opp_overlap 513069, overlap 513067 AGGTTCCTACATATT GCGCTGCAGTATTTTTA-GGGTTG TAAT TAACCAGTAAAAATAATGCAGCGC TTGATACTAAGCGTA Sde_0416 514806 - 513145 - | putative ABC transporter ATP-binding protein TERM 528 514038 - 514048 + g 88 -8.2 -4.89521 | overlap 514023 CGCCGCGCTCTTCCT GCGC TAG GCGC TTTTCTTTCGCGTCT Sde_0417 515130 - 516392 + | serine hydroxymethyltransferase TERM 529 516420 - 516435 + F 100 -10.4 -5.29782 | opp_overlap 516420 GTTACTCCTTTAAAA GGCAGC GCAA GCTGCC TTTTTTATGCCTCTC TERM 530 516435 - 516420 - f 91 -10.4 -4.08767 | opp_overlap 516420 GTTACTCCTTTAAAA GGCAGC GCAA GCTGCC TTTTTTATGCCTCTC Sde_0418 516898 - 517323 + | hypothetical protein TERM 531 517327 - 517338 + G 72 -3 -5.08088 | opp_overlap 517319, overlap 517321 AAAAACGCTTAATGT CTAA GACC TTAG TTTTTATTCCAGCTT Sde_0419 517323 - 518159 + | dolichyl-phosphate mannose synthase TERM 532 518424 - 518434 + G 79 -8.2 -4.33708 | TTAGTTACTATGCAC GCGG TAA CCGC TTTTCCTAGTAGTTT Sde_0420 518184 - 519077 + | hypothetical protein TERM 533 519539 - 519553 + G 77 -7.2 -4.39571 | TAGACGTAGAGCAGC TATCCA GTG TGGATA TTTTCGATTTGTCCA Sde_0421 519079 - 520545 + | hypothetical protein Sde_0422 520535 - 521005 + | hypothetical protein Sde_0423 521056 - 521820 + | hypothetical protein TERM 534 522170 - 522154 - g 75 -6.5 -4.46212 | opp_overlap 522167, overlap 522156 TTGGCGACGAGAAAA CCCCCAA CAC TTGGGTG TCCAATGCACCTTTC Sde_0424 521895 - 523883 + | hypothetical protein TERM 535 524001 - 523968 - T 100 -12.6 -3.86015 | opp_overlap 523970, overlap 523970 GAGCCGCTTGATAAA TACCACTTCACCAA ACTCAG TTGGTGAAGTGGTT GTATTGTTAAGCTAC TERM 536 523999 - 523970 - T 100 -15.2 -3.51934 | opp_overlap 523970, overlap 523968 GCCGCTTGATAAATA CCACTTCACCAA ACTCAG TTGGTGAAGTGG TTGTATTGTTAAGCT TERM 537 523970 - 523999 + T 100 -15.2 -3.8372 | opp_overlap 523968 523970 GCCGCTTGATAAATA CCACTTCACCAA ACTCAG TTGGTGAAGTGG TTGTATTGTTAAGCT Sde_0425 525129 - 524008 - | XerC/CodV family integrase/recombinase TERM 538 526112 - 526124 + H 71 -4.1 -4.79667 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCGGTTTT TERM 539 526186 - 526202 + H 73 -2.9 -5.10029 | opp_overlap 526176 CTAAACGCAATTTTA GCGAGTA TTT TCTTCGC TTTTTTGCAATTCCT Sde_0426 526536 - 526802 + | hypothetical protein Sde_0427 526973 - 527323 + | hypothetical protein TERM 540 527583 - 527593 + F 71 -4.6 -4.64846 | AATTTTGCCGAGTGT TGGC TTA GCCG TTTTATCGTTTCTAC TERM 541 527726 - 527716 - f 70 -2.6 -5.06414 | GGTTGGTAATAAAAA TTTA AGG TAAA GCAGGTGTTATTGGT TERM 542 528021 - 528000 - f 90 -7.3 -5.09225 | ATTCCATTTAAAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 543 528060 - 528099 + F 70 -9.6 -2.85437 | overlap 528058 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGTTAGTC TERM 544 528549 - 528528 - f 78 -7.3 -4.42653 | ATTTCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG Sde_0428 528944 - 529336 + | hypothetical protein Sde_0429 529979 - 530377 + | hypothetical protein Sde_0430 530511 - 530999 + | hypothetical protein Sde_0431 532818 - 533534 + | hypothetical protein Sde_0432 533691 - 534038 + | hypothetical protein TERM 545 534064 - 534122 + F 80 -11.3 -2.61695 | gap 2, opp_overlap 534063 CACCTGACAAATATT -GCTACGCTCGTTTTTGTGT-ATGTCGCG TAG CTCCATTTTACACAAAAACGAGCGTAGCA ATATTTGCAGGTGAG TERM 546 534702 - 534714 + F 71 -4.1 -4.79667 | GGTTAATTTGAATGT GCTAT GGA ATGGC TTTTTCCTCGGTTTT TERM 547 535196 - 535171 - f 80 -4.7 -5.10154 | AGGGAAAATGAAAAA CTTGTTGCTGC ATTT GAATCAACAAG GAAGTGGGAGAGTAT Sde_0433 535210 - 535629 + | hypothetical protein TERM 548 535636 - 535648 + F 75 -3.4 -5.16237 | overlap 535611 AACATGTAACAATTT TGTC AGCAG GACA TTTTTTGCTACGCTT TERM 549 535673 - 535685 + F 73 -9.1 -3.53224 | ACGCTTCGTTTTGCG GTGGC TTC GCCAC TTTAACGCAAAACTC TERM 550 535872 - 535851 - f 73 -7.3 -4.11394 | ATTCCATTTGTAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 551 535911 - 535950 + F 70 -9.6 -2.80492 | overlap 535909 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_0434 536108 - 536710 + | hypothetical protein TERM 552 536717 - 536729 + F 75 -3.4 -5.15634 | GGCACATAACAAGTT TGTC AACAG GACA TTTTTTGCTACGCTC TERM 553 536755 - 536765 + F 71 -6.8 -4.07687 | overlap 536753 CGCTCCGTTTTGCGG TGGC TTC GCCA TTTTACCGCAAAACT TERM 554 536953 - 536932 - f 78 -7.3 -4.42653 | ATTCCATTTATAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 555 536992 - 537031 + F 70 -9.6 -2.80492 | overlap 536990 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC TERM 556 538034 - 538012 - g 76 -7.6 -4.36411 | opp_overlap 538003, overlap 538003 GACGAAGCAGGAAAA CCTCCAGCGT TTT ACACCGGTGG CTGGAAAGATCGAGA Sde_0435 537817 - 538845 + | 5,10-methylenetetrahydrofolate reductase TERM 557 539082 - 539061 - f 73 -7.3 -4.11394 | ATTCCATTTGTAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 558 539121 - 539160 + F 70 -9.6 -2.80492 | overlap 539119 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_0436 539494 - 540234 + | S-adenosyl-L-homocysteine hydrolase TERM 559 540399 - 540411 + G 72 -6.3 -4.3255 | opp_overlap 540399 TTGGTCTGTCAAGTA GCATT GCT AATGC TTTGTTAATTGACCC Sde_0437 540344 - 540934 + | S-adenosylmethionine synthetase Sde_0438 541050 - 541490 + | regulatory protein, ArsR TERM 560 541686 - 541698 + F 71 -4.1 -4.79667 | GATTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCGGTTTT TERM 561 541760 - 541776 + F 73 -2.9 -5.10029 | opp_overlap 541750 CTAAACGCAATTTTA GCGAGTA TTT TCTTCGC TTTTTTGCAATTCCT TERM 562 541911 - 541901 - f 70 -2.6 -5.06414 | GGTTGGTAATAAAAA TTTA AGG TAAA GCAGGTGTTATTGGT Sde_0439 542084 - 542524 + | transketolase TERM 563 543050 - 543062 + F 75 -3.3 -5.0917 | overlap 543039 TACATGGCTTTCGCT GGCCA TGT TGGGC TTTCTTTTTTAGTGG Sde_0440 543284 - 543616 + | hypothetical protein Sde_0441 543789 - 544148 + | hypothetical protein TERM 564 544322 - 544334 + F 71 -4.1 -4.79667 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCGGTTTT TERM 565 544396 - 544412 + F 73 -2.9 -5.10029 | opp_overlap 544386 CTAAACGCAATTTTA GCGAGTA TTT TCTTCGC TTTTTTGCAATTCCT Sde_0442 544728 - 545186 + | coagulation factor 5/8 type-like Sde_0443 545352 - 546278 + | hypothetical protein TERM 566 546336 - 546348 + F 73 -9.1 -3.53224 | ATGCTCCGTTTTGGG GTGGC TAC GCCAC TTTACCCCAAAACTC Sde_0444 546414 - 547403 + | hypothetical protein TERM 567 547484 - 547513 + F 70 -7.1 -3.7948 | gap 1, opp_overlap 547479, overlap 547480 547479 ATCAAAAATTTGCTC GGTGAGCCGGGCGT TAT ACGCCTGG-TCGGC TTTAGTGAATATTAA TERM 568 548017 - 548005 - g 71 -3.4 -4.8143 | opp_overlap 548005 TGAAGAAGTTAAAAA GGTA GAAGA TACC ATTTCAAACATATCT TERM 569 548579 - 548556 - g 81 -4.7 -5.1848 | gap 1, overlap 548548 548558 AATTAAGTGAAAAAA CATTGGGTTT TTTTC AAACCCAA-G AGGATATAACAGGCG TERM 570 548578 - 548558 - g 79 -8.4 -4.20888 | overlap 548548 548556 TTAAGTGAAAAAACA TTGGGTTT TTTTC AAACCCAA GAGGATATAACAGGC Sde_0445 547541 - 548632 + | hypothetical protein TERM 571 548818 - 548797 - g 100 -4.4 -6.11229 | ATCAAAACAAAAAAA TAGCGTAG GTAAAT CTTCGCTA GTAAAAAATATATTT Sde_0446 548687 - 550402 + | hypothetical protein TERM 572 550999 - 551011 + F 71 -4.1 -4.79667 | GGTTAATTTGAATGT GCTAT GGA ATGGC TTTTTCCTCGGTTTT Sde_0447 551557 - 551862 + | response regulator receiver domain-containing protein TERM 573 551920 - 551932 + F 73 -9.1 -3.53224 | ACGCTCCGTTTTGGG GTGGC TAC GCCAC TTTACCCCAAAACTC Sde_0448 552533 - 552859 + | hypothetical protein TERM 574 553133 - 553149 + F 73 -2.9 -5.10029 | opp_overlap 553123 CTAAACGCAATTTTA GCGAGTA TTT TCTTCGC TTTTTTGCAATTCCT TERM 575 554070 - 554080 + F 71 -4.6 -4.64846 | AATTTTGCCGAGTGT TGGC TTA GCCG TTTTATCGTTTCTAC TERM 576 554213 - 554203 - f 70 -2.6 -5.06414 | GGTTGGTAATAAAAA TTTA AGG TAAA GCAGGTGTTATTGGT Sde_0449 554369 - 554791 + | hypothetical protein Sde_0450 554952 - 555398 + | hypothetical protein TERM 577 555707 - 555746 + F 70 -9.6 -2.80492 | overlap 555705 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTACTAGTC TERM 578 556111 - 556125 + F 70 -3.6 -4.76311 | TTGTAGGAATACTTT TATTGG GAT CTAATA TTCTTTTTGTTTCTA Sde_0451 556525 - 556872 + | hypothetical protein TERM 579 557154 - 557133 - f 73 -7.3 -4.11394 | ATTCCATTTGTAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 580 557681 - 557660 - f 78 -7.3 -4.42653 | ATTTCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 581 557720 - 557759 + F 70 -9.6 -2.80492 | overlap 557718 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_0452 558089 - 558367 + | hypothetical protein TERM 582 558403 - 558386 - f 81 -11.3 -2.73701 | overlap 558385 558381 TGCCATCAAACCAAG CTGCTGC TAAC GCAGCAG GGACTCGCAACAAGT TERM 583 558419 - 558440 + F 70 -7.9 -3.60525 | overlap 558420 GGACTCGCAACAAGT TGCTCGCCG TTTA TGGCGGGCG TTATGTGTAAATAGA TERM 584 558420 - 558439 + F 70 -9.2 -2.75993 | overlap 558419 GACTCGCAACAAGTT GCTCGCCG TTTA TGGCGGGC GTTATGTGTAAATAG Sde_0453 558466 - 558705 + | hypothetical protein TERM 585 558966 - 558945 - f 78 -7.3 -4.42653 | ATTTCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 586 559005 - 559044 + F 70 -9.6 -2.80492 | overlap 559003 TGGCGGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_0454 559386 - 559625 + | hypothetical protein Sde_0455 559787 - 560125 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Sde_0456 560740 - 561090 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Sde_0457 561243 - 561509 + | histidine biosynthesis protein HisF TERM 587 561717 - 561729 + F 71 -4.1 -4.79667 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCGGTTTT TERM 588 561791 - 561807 + F 73 -2.9 -5.10029 | opp_overlap 561781 CTAAACGCAATTTTA GCGAGTA TTT TCTTCGC TTTTTTGCAATTCCT Sde_0458 562542 - 562892 + | hypothetical protein Sde_0459 563034 - 563393 + | peptidase S41A, C-terminal protease Sde_0460 563393 - 564025 + | hypothetical protein TERM 589 564221 - 564233 + F 71 -4.1 -4.79667 | GGTCAATTTGAATGT GCTAT GGA ATGGC TTTTTCCTCGGTTTT Sde_0461 564620 - 564997 + | phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Sde_0462 565525 - 565914 + | rhodanese-like protein TERM 590 566087 - 566099 + F 74 -4.1 -4.91573 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCTGTTTT Sde_0463 566492 - 566920 + | glutaredoxin GrxC Sde_0464 567053 - 567403 + | protein export chaperone SecB Sde_0465 567612 - 568028 + | hypothetical protein Sde_0466 569147 - 568059 - | Fis family transcriptional regulator TERM 591 568915 - 568927 + g 71 -3.3 -4.87626 | TAGAAAAACTGGAGG CCGTT CCT ATCGG TTTTTACTGTTGACC Sde_0467 570350 - 569625 - | PAS/PAC sensor signal transduction histidine kinase TERM 592 570539 - 570504 - R 95 -11.5 -3.89501 | opp_overlap 570504 CAACATGGCGACAAA CTATAATTACTAGTT TTTATT AACCAGTAATTATAG TTTGAATTCAACACT TERM 593 570504 - 570539 + r 81 -9.3 -3.75332 | opp_overlap 570504 CAACATGGCGACAAA CTATAATTACTAGTT TTTATT AACCAGTAATTATAG TTTGAATTCAACACT TERM 594 570580 - 570564 - R 72 -7.3 -4.06148 | AACACTTGACATAAA GTTTGGC AAA ACCAAAC TCACTGTTAGCTGTT TERM 595 570745 - 570763 + r 75 -8.9 -3.63515 | overlap 570744 CCTAATGTTCATGCC CACAACC TTCGT GGTTGTG TTCTTGCGCATCGGG Sde_0468 571624 - 570731 - | 5,10-methylenetetrahydrofolate reductase (FADH) TERM 596 571647 - 571669 + r 100 -13.5 -3.01134 | opp_overlap 571645, overlap 571645 571639 ACCTTCTTTAATAGT CCGTGCTGA GCGTG TCAGCACGG TAATTATTAATTTAA Sde_0469 573104 - 571701 - | S-adenosyl-L-homocysteine hydrolase TERM 597 572541 - 572559 + g 71 -3.8 -4.79826 | GTTAACGTTAATAGC GGGTAC TTTTAGT GTGCCC TTTTTAATCATCTCT TERM 598 573018 - 573035 + g 73 -2.5 -5.2166 | overlap 573020 573021 AATTTCAATTTCGCG GCGGCCG TACT CGGCATC TTTTTTAAATTCTTC Sde_0470 574308 - 573160 - | S-adenosylmethionine synthetase TERM 599 574183 - 574195 + g 78 -4.8 -4.91511 | overlap 574182 CACCATGGTTTCTAC CGCA ACGCG TGCG TTTTTATCATCCGCT Sde_0471 575356 - 574349 - | ArsR family transcriptional regulator TERM 600 575285 - 575298 + g 76 -8.1 -4.12475 | overlap 575285 CGCCGCTTTTAGCAG GCGCA CAAG TGCGC TTTGTGTGCTGTCTA TERM 601 575373 - 575419 + H 100 -14.8 -3.09766 | gap 1, overlap 575368 GGCGCAAGTTTAGCA GTC-TAGCCCACCTATATCAA AAAATA TTGATATAGGTGGGCTATGAA TATGGTTTATATATA TERM 602 575474 - 575484 + H 79 -8.2 -4.1523 | TTTCTTGCTCGATTT GCGG ATT CCGC TTATTTGTAGTTAAA TERM 603 576580 - 576567 - g 76 -2.3 -5.28942 | overlap 576568 GATGCGAAAGAAAAA GGTGC AGCG GCACA GTCTGCATGGGAAGC TERM 604 576786 - 576814 + G 83 -10.3 -3.67792 | GAATTTGGCGCTGCA TTGCCAGAGCTAC TCG GTGGCTCTGCCGA TTTGGCTGGCTCTAA Sde_0472 575670 - 577673 + | transketolase TERM 605 577708 - 577762 + F 100 -13.2 -4.84262 | opp_overlap 577707 TCGCTAAACAACAGG CCTGCA-CCATTTTTGCGCGCGATTA TTTTT TAATTGC-CGCATGAATGGCTGCAGG TTTTGTTGCTTATTG Sde_0473 577947 - 579122 + | phosphoglycerate kinase TERM 606 579161 - 579190 + T 95 -12.3 -3.28537 | opp_overlap 579169, overlap 579169 AACAGTTAACAGCTT GAAAAAAACCGCC GATT GGCGGTTTTTTTA TTAGTGATTAGCTAT TERM 607 579169 - 579182 + T 100 -9.5 -5.84381 | opp_overlap 579169, overlap 579161 ACAGCTTGAAAAAAA CCGCC GATT GGCGG TTTTTTTATTAGTGA TERM 608 579182 - 579169 - T 100 -9.5 -5.42862 | opp_overlap 579169 579161 ACAGCTTGAAAAAAA CCGCC GATT GGCGG TTTTTTTATTAGTGA rdgC 580129 - 579212 - | recombination associated protein TERM 609 580526 - 580538 + H 72 -7.7 -3.76373 | GCCGTGTCGTGCCTG CTTGC TTT GCAAG TTTGGCTGTTCAAAA TERM 610 580990 - 581013 + G 70 -9.6 -3.08812 | gap 1, overlap 580971 580989 GCACCGCCGCTGGCG GCA-GCGCGCA ATA TGTGCGCCTGC ATTTGTTGGCGCGCG TERM 611 582647 - 582632 - g 79 -3.2 -5.30616 | opp_overlap 582632 582633, overlap 582633 CGATGCAAATAAAAA CGGTTC TATC GAACCC TTTGAAGATTACACC Sde_0475 580566 - 585311 + | Beta-glucosidase-related glycosidases-like Sde_0476 585346 - 585882 + | hypothetical protein Sde_0477 585907 - 586695 + | hypothetical protein TERM 612 587299 - 587284 - f 87 -4.6 -5.53288 | TTTAATTCAAAAAAA GGCCAC GGCG GTTGCC AAAGGGTCGCTCTTG TERM 613 587498 - 587483 - g 78 -5.4 -4.86731 | TGTCGGTAAATAAAA CTGCTA CGGC CAGCAG TGAAATGCAAGCTGC Sde_0478 587347 - 590433 + | GTP-binding protein TypA TERM 614 590479 - 590458 - f 76 -10.1 -3.33399 | opp_overlap 590458 TTTAAGTAAACCCAA GGCGGCAAC GAAA GTTGTCGCC TTTTTTGCGTTTTAG TERM 615 590458 - 590479 + F 100 -12.3 -5.2696 | opp_overlap 590458 TTTAAGTAAACCCAA GGCGGCAAC GAAA GTTGTCGCC TTTTTTGCGTTTTAG TERM 616 590677 - 590661 - f 84 -10.8 -3.58533 | CGAGAATGCCTGAAA GCCCCG TAGGG CGGGGC CAAAACGTCCATCCG TERM 617 591484 - 591474 - g 79 -4.6 -5.10933 | opp_overlap 591482 591483 GTACTTAAAAGAAAA CGAC GTA GCCG CAGATATGATTCTGC Sde_0479 590848 - 591990 + | signal transduction ATPase Sde_0480 592109 - 592906 + | response regulator receiver domain-containing protein TERM 618 593059 - 593096 + F 100 -17.1 -3.87869 | overlap 593093 TCACGCTGGCCACTT TCTCGCGAGCTTAGCAG CCAA CTGCTAAGCTCGCGCCA TTTCTAGGGCATTGC Sde_0481 593212 - 594366 + | hypothetical protein Sde_0482 594366 - 595295 + | hypothetical protein TERM 619 595316 - 595361 + T 100 -12.9 -3.56486 | opp_overlap 595320 595324, overlap 595320 595324 ATGATTGTTTTTTGG TAAATAAAGCACAGCCCAA TTGGGATT TTGGGATGTGCTTTATTTG TATTTACCTTTTGTG TERM 620 595357 - 595320 - T 89 -11.5 -3.53012 | opp_overlap 595320 595316 595324, overlap 595324 TTGTTTTTTGGTAAA TAAAGCACAGCCCAA TTGGGATT TTGGGATGTGCTTTA TTTGTATTTACCTTT TERM 621 595320 - 595357 + T 100 -11.5 -4.37554 | opp_overlap 595320 595324, overlap 595316 595324 TTGTTTTTTGGTAAA TAAAGCACAGCCCAA TTGGGATT TTGGGATGTGCTTTA TTTGTATTTACCTTT TERM 622 595324 - 595353 + T 86 -7.9 -4.73432 | opp_overlap 595320 595324, overlap 595320 595316 TTTTTGGTAAATAAA GCACAGCCCAA TTGGGATT TTGGGATGTGC TTTATTTGTATTTAC TERM 623 595353 - 595324 - T 82 -7.9 -4.41348 | opp_overlap 595324 595320 595316, overlap 595320 TTTTTGGTAAATAAA GCACAGCCCAA TTGGGATT TTGGGATGTGC TTTATTTGTATTTAC Sde_0483 596454 - 595420 - | hypothetical protein TERM 624 595496 - 595514 + g 86 -4.5 -5.55769 | overlap 595497 GCGGCGAGTAGTGTT GCAGCTG CTGTC CAGCTGG TTTTTTCTTCTGGCC TERM 625 595497 - 595513 + g 71 -8 -3.92377 | overlap 595496 CGGCGAGTAGTGTTG CAGCTG CTGTC CAGCTG GTTTTTTCTTCTGGC TERM 626 596031 - 596042 + g 77 -7.2 -4.39696 | overlap 596029 GCGCCCATTGAATGT CGCC CTGT GGCG TTTGTTGGTTTACAA TERM 627 596151 - 596141 - G 74 -8.2 -4.00038 | TAGCAGTACCACAAA CCCG TGG CGGG GTAGGCGACAAAGTT TERM 628 596191 - 596230 + g 86 -4.2 -5.56372 | gap 1, overlap 596193 TTTTGCATCGCTTAT TTGCAGC-GGTTCGCCAAT ATA GTTAGCGTGCCAGCTGCCA TTTTTATTTTGATTT Sde_0484 597186 - 596464 - | putative methyltransferase Sde_0485 598588 - 597173 - | putative glycosyl transferase TERM 629 597211 - 597223 + g 85 -3.3 -5.60993 | TCTCGCTGGCGGTGA GCCTT GCT GGGGC TTTTTTTATAAAAGC Sde_0486 599186 - 598656 - | response regulator receiver (CheY-like) modulated CheW protein Sde_0487 599325 - 599918 + | methyl-accepting chemotaxis sensory transducer / imidazoleglycerol-phosphate dehydratase Sde_0488 600021 - 600698 + | imidazole glycerol phosphate synthase subunit hisH TERM 630 600931 - 600918 - g 79 -9.5 -3.65902 | CCTAGTGGATTTAAA CGGCG CCTT CGCCG GCGAACCAGTTAACG Sde_0489 600760 - 601491 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Sde_0490 601553 - 602326 + | imidazole glycerol phosphate synthase subunit HisF TERM 631 602338 - 602315 - T 74 -9.6 -3.29829 | overlap 602316 GAGAGGGGGGTAGAA GTGAGGCTGT AAAA ACAGCCTCAA GAACAGTTATTGCGA TERM 632 602337 - 602316 - T 91 -13.1 -2.57683 | overlap 602315 AGAGGGGGGTAGAAG TGAGGCTGT AAAA ACAGCCTCA AGAACAGTTATTGCG Sde_0491 604212 - 603064 - | hypothetical protein TERM 633 603963 - 603980 + g 87 -6.9 -5.252 | AAGGTGGGGTTTGTT CTGTGCG GGGG CGCTCAG TTTTTTCTGCCGGTA TERM 634 604149 - 604138 - G 74 -5.8 -4.56597 | opp_overlap 604146, overlap 604140 GGGGCGCGTTAAAAA CAGC GAGA GCTG CTGCCAGCTTGTTAG Sde_0492 605612 - 604224 - | C-terminal processing peptidase TERM 635 604648 - 604665 + g 72 -5.5 -4.4261 | CCGAAACTGCGGGTG CCAAGCA CCAG TGCTCGG TTTTGGTCTTGCAGG TERM 636 605020 - 605036 + g 84 -7.9 -4.73682 | overlap 605022 TGCTCGACAATATCC GAGCGCA CGC TGCGCAC TTTTATCTTGTCGCG TERM 637 605121 - 605131 + g 87 -6.8 -5.24531 | overlap 605116 605120 AATATCGGTACCCGG TGCG CCG CGCA TTTTTTCTACAGCAT Sde_0493 606784 - 605660 - | ATPase TERM 638 605880 - 605866 - G 79 -9.2 -4.03888 | GATCCACAATAATAA GCAGCC CGT GGCCGC GCAAGTAATCAGAAA TERM 639 605912 - 605899 - G 89 -6.7 -5.38249 | opp_overlap 605907 AGTAATCAGAAAAAA CAACG CGAC CGTTG TGAATGGCTTTTACA TERM 640 606778 - 606816 + g 93 -10.3 -4.43681 | gap 1, opp_overlap 606782 606784, overlap 606783 606784 AAACTGCGAGTGCAC ACAACA-CGGCACCGCGT TTAA GCGCGGTGCCGATATTGG TTTTGATGTTGGCTA TERM 641 606812 - 606782 - G 82 -11.2 -3.50393 | gap 1, opp_overlap 606778 606783 606784, overlap 606784 TGCGAGTGCACACAA CA-CGGCACCGCG TTTAAG CGCGGTGCCGATA TTGGTTTTGATGTTG TERM 642 606783 - 606810 + g 93 -14.8 -3.44148 | opp_overlap 606782 606784, overlap 606778 606784 GCGAGTGCACACAAC ACGGCACCGCGT TTAA GCGCGGTGCCGA TATTGGTTTTGATGT TERM 643 606784 - 606809 + r 100 -18.3 -2.65404 | opp_overlap 606782 606784, overlap 606783 606778 CGAGTGCACACAACA CGGCACCGCGT TTAA GCGCGGTGCCG ATATTGGTTTTGATG TERM 644 606809 - 606784 - R 100 -17.6 -3.32698 | opp_overlap 606784 606783 606778, overlap 606782 CGAGTGCACACAACA CGGCACCGCG TTTAAG CGCGGTGCCG ATATTGGTTTTGATG Sde_0494 608387 - 606837 - | phosphoglyceromutase TERM 645 607365 - 607376 + g 73 -4.4 -4.81249 | GCTAAAGAAGAATGT TACG TGAG CGTA TTTTTCGGTTTCGGC TERM 646 607388 - 607413 + g 72 -5.3 -4.60041 | CGTATTTTTCGGTTT CGGCAATGCGC AATT GCTTCTTGCCG TTTTTAGCCATCACT Sde_0495 608633 - 609031 + | hypothetical protein Sde_0496 609061 - 609315 + | glutaredoxin Sde_0497 609463 - 609969 + | protein translocase subunit secB TERM 647 610017 - 609996 - f 100 -15.9 -4.7629 | opp_overlap 609996 GCAGTAACGTAAAAA GCGGTGTCG GCAG CGACACCGC TTTTTTTATGCCTTT TERM 648 609996 - 610017 + F 100 -15.9 -5.68039 | opp_overlap 609996 GCAGTAACGTAAAAA GCGGTGTCG GCAG CGACACCGC TTTTTTTATGCCTTT TERM 649 610285 - 610268 - g 70 -4.7 -4.38712 | overlap 610269 610270 CGCATTTGCAGAAAA GCCGCGC CATC ACGAGGC GCGTGATGATCGTCG Sde_0498 610185 - 610766 + | hypothetical protein TERM 650 610832 - 610795 - T 74 -9.9 -3.09933 | overlap 610799 TTTGAAGTGAGTGAA GTGACCCTATCGCAAGT GCTA ATTTGCGATAGGGTGGC ATAACGTAACGAGGG TERM 651 610828 - 610799 - T 91 -13.7 -2.55392 | overlap 610795 AAGTGAGTGAAGTGA CCCTATCGCAAGT GCTA ATTTGCGATAGGG TGGCATAACGTAACG Sde_0499 612274 - 610853 - | response regulator receiver domain-containing protein TERM 652 611027 - 611047 + g 83 -13.3 -3.14344 | opp_overlap 611026 611025 ATCAGAAAGAATATC GCTTTGGCC ACA GGCCAAGGC TTGATCGGCCCAGTG TERM 653 611286 - 611308 + g 71 -10.5 -2.6583 | overlap 611283 CCGAGCTCTTCGGCG GCGCGGCGC AAAAA GTGCTGCGC TAGCTTTGGAATATC Sde_0500 613340 - 612267 - | PAS/PAC sensor signal transduction histidine kinase TERM 654 612902 - 612912 + g 70 -2.4 -5.01811 | CCGCCCCGCGAATGC CGCC TAA GGGG TTTTTAATTTCGTGG Sde_0501 614189 - 613674 - | hypothetical protein TERM 655 614272 - 614256 - R 100 -10.8 -5.93252 | opp_overlap 614256 CCCAAAAACAAAAAA GCCCGC ATAAA GCGGGC TTAGATGTAGAGCAC TERM 656 614256 - 614272 + r 79 -10.8 -3.12351 | opp_overlap 614256 CCCAAAAACAAAAAA GCCCGC ATAAA GCGGGC TTAGATGTAGAGCAC Sde_0502 615705 - 614299 - | L-glutamine synthetase TERM 657 614415 - 614446 + g 77 -10.2 -3.30159 | overlap 614424 CAGTGAATACGCCGC CTTGGGTAAGGAAC TCGC GATCCTTGTCCAAG TTGTCCAACGCTTCG TERM 658 615895 - 615881 - H 70 -7.8 -3.61178 | TTGATTGACGTGAAA CCCCGT ATT ACAGGG CTTCGGAGAAGGGTG TERM 659 615941 - 615917 - H 70 -10.1 -2.5001 | opp_overlap 615917 615910, overlap 615916 615919 AGAAGGGTGATCAAT TAGCGAGCA AAAAGAG TGCTCGCTA TTGGTGCTTTGAATT TERM 660 615917 - 615941 + H 76 -10.1 -3.33885 | opp_overlap 615916 615917 615919, overlap 615910 AGAAGGGTGATCAAT TAGCGAGCA AAAAGAG TGCTCGCTA TTGGTGCTTTGAATT Sde_0503 615993 - 617444 + | thiamine biosynthesis protein ThiI Sde_0504 617485 - 617928 + | multi anti extrusion protein MatE Sde_0505 618130 - 619287 + | mannose-6-phosphate isomerase TERM 661 619295 - 619320 + T 100 -19.1 -4.35926 | opp_overlap 619290 619288 ACGAATAATACGTTC CTGCGCTCGGT GATA ACCGAGCGCAG TTTTACGTTTAGCCT Sde_0506 620327 - 619329 - | LacI family transcription regulator TERM 662 619544 - 619566 + g 79 -9.8 -3.76224 | TTACTGAAATATCCT GTGGTACGGC GTA GCCGTGCGAC TTTAGTGACTGCACA TERM 663 620746 - 620706 - g 100 -3.9 -6.32017 | opp_overlap 620736 620739, overlap 620708 620724 AATAAATAAAAAAAA TAGCCCAGCGCAATCAAAT GGT ATCTACCAGCGTTGGGCCA ACCCTATTATCACTG TERM 664 620744 - 620708 - g 73 -4.3 -4.74858 | opp_overlap 620736 620739, overlap 620706 620724 TAAATAAAAAAAATA GCCCAGCGCAATCAAAT GGT ATCTACCAGCGTTGGGC CAACCCTATTATCAC TERM 665 621411 - 621399 - g 71 -3.3 -4.85195 | AAAAGAAGTTAAAAA TGGCC AAG GCCCA GCGCCCATTAAAACC Sde_0507 620638 - 621819 + | hypothetical protein Sde_0508 621821 - 623053 + | hypothetical protein Sde_0509 623119 - 624492 + | mannanase, putative TERM 666 624533 - 624550 + F 100 -12.7 -5.27769 | opp_overlap 624533 CGGTTTAACGATAAA CGCGCCA ATGT TGGCGCG TTTTTACTTTTTTCT TERM 667 624550 - 624533 - f 100 -12.7 -4.05446 | opp_overlap 624533 CGGTTTAACGATAAA CGCGCCA ATGT TGGCGCG TTTTTACTTTTTTCT TERM 668 625603 - 625620 + G 72 -6.3 -4.20367 | gap 1, overlap 625607 AGCTCTTACTCCCAT CTG-GCCT ACG AGGCGCAG TTGTTTATTGCGCCA Sde_0510 624682 - 626724 + | Outer membrane receptor for ferrienterochelin and colicins-like TERM 669 628073 - 628060 - g 79 -8.1 -4.26344 | AGAGCCGTACGAAAA CGTCG TTAT CGACG TTGAAGAGCAGCACC Sde_0511 626843 - 628669 + | regulatory protein TypA TERM 670 628742 - 628719 - T 100 -14.6 -5.38326 | opp_overlap 628719 TGAACCAAATAAAAA GGCTTGACGG GAAA CCGCCAAGCC TTTTTTGCATTTGCT TERM 671 628719 - 628742 + T 100 -12.4 -5.22943 | opp_overlap 628719 TGAACCAAATAAAAA GGCTTGACGG GAAA CCGCCAAGCC TTTTTTGCATTTGCT Sde_0512 629384 - 628773 - | hypothetical protein Sde_0513 631401 - 629470 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 672 630206 - 630225 + g 70 -2.2 -5.01553 | TCTTTGCGAGCGCTA GCTATT CTTACTTC AATAGC TTTTATTTCTGGGTT Sde_0514 632355 - 631453 - | hypothetical protein TERM 673 632750 - 632740 - g 74 -8.2 -3.84394 | opp_overlap 632748 TAGAGACAAGCTAAA GGCG CAT CGCC GCAAACTGGGGCTTA Sde_0515 632693 - 635932 + | ATPase-like Sde_0516 636947 - 635988 - | hypothetical protein Sde_0517 637570 - 636962 - | response regulator receiver domain-containing protein TERM 674 637593 - 637581 - R 71 -9.1 -3.30187 | opp_overlap 637584 637586, overlap 637579 AGCATAATAAAATTA CCAGC TAT GCTGG GCGTATGCTTTGAGC Sde_0518 639090 - 637585 - | histidine kinase TERM 675 638596 - 638617 + g 75 -9.5 -3.57263 | gap 1, opp_overlap 638595 638599, overlap 638604 ACCTATAGGTAACAG CAAGCCTCGC TCT GCGAG-CTTG TTTGAGACTACACCT TERM 676 639361 - 639323 - R 100 -15.7 -3.18912 | gap 1, opp_overlap 639335, overlap 639327 639335 CGATGCAGCGAGTAA GTGATTTTCAAATCGCCT TACA AGGCGATTTGAAAAT-AC AGTGCGGTGAATGAC TERM 677 639358 - 639327 - R 100 -17.6 -2.57244 | opp_overlap 639335, overlap 639323 639335 GCAGCGAGTAAGTGA TTTTCAAATCGCCT TACA AGGCGATTTGAAAA TACAGTGCGGTGAAT TERM 678 639335 - 639350 + r 75 -9 -3.57462 | opp_overlap 639327 639323 639335 TAAGTGATTTTCAAA TCGCCT TACA AGGCGA TTTGAAAATACAGTG TERM 679 639350 - 639335 - R 75 -9 -3.58269 | opp_overlap 639335, overlap 639327 639323 TAAGTGATTTTCAAA TCGCCT TACA AGGCGA TTTGAAAATACAGTG Sde_0519 642466 - 639377 - | putative CheA signal transduction histidine kinases TERM 680 640786 - 640814 + g 71 -3.8 -4.78572 | TAGTAGAAACAGGTA CCAGCCGCAGTT TTAAT AGTTGCCGTTGG TTTTCTTGGTTAAGA TERM 681 640817 - 640830 + g 77 -3.9 -5.1287 | TAGTTGCCGTTGGTT TTCTT GGTT AAGAA TTTTTTGGCTATAAC Sde_0520 644616 - 642481 - | putative methyl-accepting chemotaxis sensory transducer TERM 682 643380 - 643391 + g 74 -5.8 -4.70879 | CCGAAATGTCGCGTA CGCT GTGC AGCG TTTTTGCGGTTTCGG Sde_0521 645226 - 644639 - | hypothetical protein Sde_0522 645593 - 645231 - | response regulator receiver domain-containing protein Sde_0523 646634 - 645705 - | response regulator receiver domain-containing protein Sde_0524 647116 - 647925 + | putative integral membrane sensor protein TERM 683 648354 - 648370 + G 72 -5.7 -4.43307 | opp_overlap 648354, overlap 648350 648352 TAGTGGGTTAACTCA GCGCGTG CAG CGCGAGC TTGTTTTATTGGGAC Sde_0525 648310 - 650007 + | hydrogenase regulation HoxX TERM 684 650058 - 650037 - T 100 -13.7 -3.75332 | opp_overlap 650037 ATGTTTGAACGTAAA GGCGAGCCA CAAA CGGCTCGCC TTTTTTATTCCCCTA TERM 685 650037 - 650058 + T 100 -13 -5.46657 | opp_overlap 650037 ATGTTTGAACGTAAA GGCGAGCC ACAAAC GGCTCGCC TTTTTTATTCCCCTA Sde_0526 651889 - 650063 - | TonB-dependent receptor TERM 686 652174 - 652186 + G 76 -9.1 -3.8125 | overlap 652172 TGGCGGATTTTAACG TGGGC CTT GCCCA TATTTTAATTAAGCA Sde_0527 652071 - 652490 + | Alpha-1,6-glucosidases, pullulanase-type Sde_0528 652894 - 652493 - | hypothetical protein TERM 687 652608 - 652598 - G 74 -5.4 -4.68994 | ATCATCAGCTAAAAA CTTG TAC CAAG CTGCGAGTGCGTTAC TERM 688 652825 - 652863 + g 90 -10.3 -4.27316 | gap 1 CTTCAATTAGCTCCT GCCCGTTCACTCGCCCAG AATA CTGGGTGA-TGACCGTGC TTTTAGATTCCCAAA Sde_0529 653077 - 653445 + | hypothetical protein Sde_0530 653880 - 653446 - | alpha amylase domain-containing protein Sde_0531 653965 - 654399 + | hypothetical protein TERM 689 654389 - 654405 + T 70 -7.2 -3.7697 | TGCCTAAAGCTGTAT GGGTGC ACTAA GCGCCC TTGTATTCTGGCTCT Sde_0532 654752 - 654396 - | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 690 654592 - 654605 + g 77 -3.8 -5.16071 | overlap 654577 GCGCCCCGGTACTGG GTGG TCGCTT CCAC TTTTTGTTCATGCTT Sde_0533 655180 - 655662 + | nucleotide-binding protein Sde_0534 656183 - 655674 - | hypothetical protein TERM 691 656517 - 656489 - g 84 -10.2 -3.87869 | overlap 656479 GCAATGGCCGATAAA TCGCGCCCAGCG GGCGA CGTTGCGCGCGA TGCCAACCGCAAGCC TERM 692 656771 - 656785 + G 71 -10 -3.1247 | opp_overlap 656770 GGGCCTGTATTCAAT TTGGGC AAT GCCCAA TTGGATGTGAAAAAT Sde_0535 656369 - 657133 + | hypothetical protein Sde_0536 657769 - 657248 - | cellulose-binding family II protein TERM 693 658371 - 658394 + G 75 -6.6 -4.48449 | CATTGGGCAACACCA CGGTTCCGCT TATT GGCGGGGCTG TTTCTGTTTTAGTGA TERM 694 659111 - 659125 + G 72 -2.8 -5.04385 | GTGGGTATTCCCCTT TATGCC GCC GGTGTA TTTTTTACCGCTGTG Sde_0537 657878 - 659260 + | hypothetical protein TERM 695 659252 - 659236 - f 84 -5.1 -5.26316 | CTATTGGATAAAAAA CCTCG TTAAAGC CGAGG CCAAATAATTGGTTA TERM 696 659618 - 659602 - g 100 -10.9 -5.10461 | opp_overlap 659600, overlap 659611 GGTAGTCAACAAAAA TGGCAAC AAT GTTGCCA AATTGAATGACAACA Sde_0538 659462 - 660091 + | hypothetical protein TERM 697 660118 - 660134 + F 100 -7.2 -5.59879 | opp_overlap 660118 AACAACCTATATAAA GCCGTG CTTGT CGCGGC TTTTTTGTGTTTGTC Sde_0539 660372 - 660896 + | hypothetical protein Sde_0540 661006 - 662073 + | alpha amylase domain-containing protein TERM 698 662107 - 662125 + T 89 -11.7 -3.54741 | opp_overlap 662107 TGAGCCAATGAAAAA GAGCGCC ATTTA GGCGCTC TTTAAAAGGCTACTG TERM 699 662125 - 662107 - T 100 -11.7 -4.88407 | opp_overlap 662107 TGAGCCAATGAAAAA GAGCGCC ATTTA GGCGCTC TTTAAAAGGCTACTG Sde_0541 662647 - 662150 - | hypothetical protein Sde_0542 662805 - 663146 + | DEAD/DEAH box helicase-like Sde_0543 663197 - 663907 + | peptidase S26A, signal peptidase I Sde_0544 665582 - 663933 - | putative allophanate hydrolase Sde_0545 666313 - 665582 - | hypothetical protein Sde_0546 667233 - 666796 - | D-tyrosyl-tRNA deacylase TERM 700 667302 - 667286 - R 100 -10.8 -5.86061 | GCTTAGCAAAAAAAA GCCGGC GCTAG GCCGGC AAATACACGGTTGTG Sde_0547 669449 - 667338 - | beta-propeller domain-containing protein TERM 701 669426 - 669448 + g 81 -3.4 -5.35815 | AGCAAGTAACTTTAG TGTGTGCATT TGT AGTGCGTGCA TTTTTCTTTCCTATC Sde_0548 669844 - 670827 + | PAS/PAC sensor signal transduction histidine kinase Sde_0549 670829 - 671251 + | peptidoglycan-binding LysM Sde_0550 671253 - 671942 + | two component transcriptional regulator TERM 702 672295 - 672276 - g 76 -8.6 -4.02132 | gap 1 CGCCAAATTTACAAA CAGCTCGCG CAA CGCGA-CTG GGTAGTAAGGGTTAT Sde_0551 671946 - 673235 + | sensor protein RstB, putative TERM 703 673280 - 673222 - T 84 -11.3 -3.14344 | opp_overlap 673232 CATGGCCGGTATTAA TCGCTAATGGCTAATCTCTAATAGCTA GCTAG TAGCTACTATCGATTAGTAATTAGCGA TTAGCGATTGAGTTC Sde_0552 674265 - 673294 - | prolyl aminopeptidase TERM 704 673696 - 673722 + g 76 -2.3 -5.31275 | gap 1, overlap 673697 673701 CTTAGCGGCAGACAT TTTAGCCAGCTC GTTA GAGCCGG-TAAG TTTTTTATAGTACGC TERM 705 674731 - 674752 + GH 76 -5.1 -4.89852 | overlap 674733 GCATCTGGCAGCGAC CTCGCTTTT TCGG AAGAGCGCG TTTTTATAGATATGG Sde_0553 674530 - 674931 + | hypothetical protein TERM 706 674963 - 674925 - gf 73 -8.4 -3.60098 | opp_overlap 674933 AGCGGTTACTGCAAA CCGTTAAC-CTGTTACGC AACAG GCGTA-CAGTATTAACGG CAAAACAAATTGCAG TERM 707 675144 - 675160 + GF 71 -9.4 -3.05844 | AAGCATTGTTACTTG GCGCAC GCATG GTGCGC TCTTGGAGTGACAAG TERM 708 675234 - 675213 - gf 79 -6.6 -4.67982 | gap 1, overlap 675215 GCGCACTCAACAAAA TACTGGCGG TACTG CCGCCAG-A CCTACGTGAATTAGA TERM 709 675233 - 675215 - gf 100 -11.7 -3.95554 | overlap 675213 GCACTCAACAAAATA CTGGCGG TACTG CCGCCAG ACCTACGTGAATTAG TERM 710 675384 - 675408 + GF 77 -3.5 -5.20328 | gap 1, overlap 675384 TAAATCAAACCCCAT CCC-AGCGCC TTATTT GGCCCTTGGG TTTGTTTTTTTGGGG Sde_0554 674897 - 675601 + | TonB-dependent receptor TERM 711 676290 - 676270 - g 83 -6.7 -5.07053 | AACCATTCTAAAAAA GCGCGACGG CTA CTACCGCGC CTTCGATCAATTCAA Sde_0555 676046 - 676690 + | DNA-3-methyladenine glycosylase I Sde_0556 676857 - 678731 + | alpha amylase domain-containing protein TERM 712 679147 - 679157 + F 78 -5.4 -4.91712 | TAACCGTTTTTTTAC CTGT GTC ACAG TTTTTATACATTGGC Sde_0557 679298 - 681715 + | hypothetical protein TERM 713 681784 - 681806 + T 100 -14.9 -5.52023 | opp_overlap 681781 681780 681778 AGTTAAAAAGATTGA GGGCCTACC GGTTG GGTAGGCCC TTTTTTATTGGTGGT Sde_0558 683808 - 681811 - | regulatory protein, LacI TERM 714 682080 - 682070 - G 77 -6.8 -4.5442 | CCGCCAATTACAAAA CCTG GCG CAGG GCCGTAGCGAGAAGT TERM 715 682159 - 682147 - G 72 -5.5 -4.37886 | opp_overlap 682147 682148, overlap 682148 CCATGTGTGATAAAA CTCGG TTA CCGAA TTTTCGGCGCCGTCA TERM 716 683409 - 683363 - G 76 -2.3 -5.30155 | gap 2 TTATCAATTAAAAAA GGGTAGGACTTC-T-CGCCAC TGTCGGC GTGGCGCACGTAGTACTCCCC CGCAGTTTGCAGCCC TERM 717 683875 - 683896 + H 84 -10.9 -3.73858 | TGGTTTAGTCACGGT TTGTTCGCC ATTC GGCGAGCAA TTGATTTTGGTGTAA TERM 718 686888 - 686876 - g 78 -6.3 -4.66163 | AGGCTTATCGAAAAA TGTAG CGT CTACA ACATTATTTTGGAAT Sde_0559 684294 - 687176 + | TonB dependent receptor-related protein TERM 719 687159 - 687181 + F 79 -8.5 -4.16842 | CAATTTTTCGTGGGC GTGACTTAC TCAAT GTAGGTCAC TTTATTGCAACTCAA Sde_0560 687240 - 691538 + | putative pullulanase precursor TERM 720 691583 - 691600 + F 100 -11.3 -5.58454 | opp_overlap 691578 TCGTTCAAACCTTAA GCCACTG TTCG CAGTGGC TTTTTTTGCTCTAAA TERM 721 691662 - 691641 - f 71 -8.8 -3.28791 | overlap 691628 691627 AGGGCCGCGCCAGAA GGTTAACC TATTAT GGTTAACC ACCTAGCAAGCCTAA Sde_0561 691785 - 692663 + | surface lipoprotein-like TERM 722 692828 - 692857 + G 79 -8.6 -4.20696 | TGTTTTTTTACTACT TACTGGGGTTGC ACTCTG GCAGGCCCAGTA TTTTAAAATTGATGC TERM 723 693465 - 693452 - g 73 -4.5 -4.7889 | AGAAATATTGAAAAA CGCCT CTGC AGACG GTGAGTTTTTTCTAG TERM 724 694125 - 694145 + G 72 -5.3 -4.72272 | AGCATTGTAGTGGCA GCAACAGGC GTT GGCGGTTGC TTTTTACTCACGGCA TERM 725 694440 - 694452 + G 73 -7.7 -4.16016 | opp_overlap 694439 CCGCTTGTGGAATAC GAGCT ATC AGCTC TTTATTACGCACTGG Sde_0562 692781 - 695183 + | hypothetical protein TERM 726 695268 - 695302 + F 100 -13.1 -4.45738 | opp_overlap 695275, overlap 695270 GTGACGCAAGTTATT TAGCATACGTATTCA ACGCC TGAATACGTATGCAA TTTGTTGTTGGCATG TERM 727 695270 - 695300 + F 100 -15.7 -2.55309 | opp_overlap 695275, overlap 695268 GACGCAAGTTATTTA GCATACGTATTCA ACGCC TGAATACGTATGC AATTTGTTGTTGGCA TERM 728 696397 - 696376 - g 81 -5.2 -5.24129 | opp_overlap 696361 GGTGGCCACAAAAAA TGGTTACC TTTGTG GATAACCA CGATACTGGCCCAAG TERM 729 697302 - 697324 + G 72 -4.8 -4.56775 | GTATTCTCGCGCGGC TCTTCAAACG CCA CGATTGTAGA TTTTTAACCCCAAGT Sde_0563 695508 - 697331 + | Alpha-amylase TERM 730 697375 - 697396 + G 100 -15.9 -5.28778 | CGTAGTAAACGTTGT GCCCGCTAG GAAA CTAGCGGGC TTTTTTATGGGTGAT Sde_0564 697373 - 697636 + | hypothetical protein Sde_0565 699200 - 697764 - | signal peptide and transmembrane prediction TERM 731 697977 - 697966 - G 76 -4.4 -5.00138 | TAGTTAAACCAAAAA TAGC TTAG GCTA TCGCCATCTGGGTCG TERM 732 698941 - 698956 + g 70 -9 -3.32159 | opp_overlap 698940 AGGTTCGAATGAACT TTGGCG TAAG CGCCAA TTACCTTTGCTATAG Sde_0566 699570 - 700118 + | hypothetical protein TERM 733 700180 - 700226 + F 100 -13.8 -3.91087 | opp_overlap 700183 700185, overlap 700185 ATTTAACCCATTTCA CAACACCAGCCACTTGCAGTTG TTT CAATTGCGAGAGGGTGGTTTTG TTTGCTATGGTTTGG TERM 734 700185 - 700221 + F 100 -12.3 -4.97158 | opp_overlap 700185 700183, overlap 700180 ACCCATTTCACAACA CCAGCCACTTGCAGTTG TTT CAATTGCGAGAGGGTGG TTTTGTTTGCTATGG TERM 735 700461 - 700480 + G 75 -2.8 -5.10163 | ATTCCCTAATAGCTG GCCAGCAA GAGG TTATTGGC TTTTATTTTGAGGTT TERM 736 701179 - 701223 + G 100 -9.4 -5.09225 | gap 2, opp_overlap 701187 GCCAGCAAATAGCCA GTCGCAAACCCAGCCGCAATCA TTT TGGTTGTTGCTGGG-T-GCGGC TTTTTTAGGTGGGGT TERM 737 701541 - 701557 + G 83 -10.1 -4.17556 | overlap 701535 TAACACTTGCCGGTT CGCATCG AGG CGGTGCG TTTATTACCGGTGTG TERM 738 701681 - 701700 + G 77 -7.1 -4.39426 | overlap 701696 TTGTTTGTGGGTTTA GGTGCTG GTTTGG CAGCGCC TTTTGTGGCGCTATG Sde_0567 700283 - 702373 + | glucan 1,4-alpha-glucosidase TERM 739 702610 - 702623 + G 73 -2.3 -5.15969 | AGTTTCCGTTTGGCC GTGGT TTGC GCCGC TTTTTTCGCTTCAAC Sde_0568 702571 - 703194 + | alpha amylase domain-containing protein TERM 740 703273 - 703237 - T 73 -10.1 -2.94232 | opp_overlap 703235, overlap 703236 GGCTGCCGAAATAAG GTGCTACAGGGGTGGGC GGT GCTCACCCCTGTAAAAA ACGGTGTATCTTTAC Sde_0569 705641 - 703296 - | hypothetical protein TERM 741 706051 - 706076 + r 78 -9.1 -3.80551 | overlap 706053 TTTGCAGCGGAGGTT TTGAGCACTAA ATTA TTAGTGCTCTA TTTGATGGGTATTTC TERM 742 706053 - 706074 + r 89 -11.7 -3.47762 | overlap 706051 TGCAGCGGAGGTTTT GAGCACTAA ATTA TTAGTGCTC TATTTGATGGGTATT Sde_0570 706221 - 706066 - | penicillin-binding protein 1C Sde_0571 706581 - 706279 - | hypothetical protein Sde_0572 706909 - 706622 - | hypothetical protein TERM 743 708048 - 708034 - g 70 -10 -3.11096 | overlap 708032 AAAAACTAAAGTAGA TGTGGC GTG GCCACA GGATTGGATACGAAC Sde_0573 707513 - 709213 + | alpha-amylase G-6 precursor Sde_0574 709989 - 709348 - | hypothetical protein Sde_0575 712958 - 710271 - | hypothetical protein TERM 744 710314 - 710331 + g 71 -7.1 -4.08887 | opp_overlap 710314 TCGTTGCTAAATGTA GATGAAA AAGC TTTCATC TTTGCTTTGAGTAGT TERM 745 710983 - 711005 + g 74 -5.6 -4.58685 | overlap 711003 GAGGGTATAACACGT GCGTTAGC ATTAAGG GTTAACGC TTTTTGCCAGCGTTT TERM 746 711664 - 711650 - G 74 -5.7 -4.57569 | TTAGTGTTTTAAAAA TTGGC CAAGC GCCAA GATTAAGTGCGCCGG TERM 747 711867 - 711887 + g 74 -3.9 -5.03145 | opp_overlap 711869, overlap 711870 TTCTGTTTTATACAG TAGCTCCGC CGC GCGCAGTTG TTTTTTAAGCGCTTC TERM 748 711870 - 711884 + g 74 -5.6 -4.61482 | opp_overlap 711869, overlap 711867 TGTTTTATACAGTAG CTCCGC CGC GCGCAG TTGTTTTTTAAGCGC TERM 749 713704 - 713724 + G 71 -9.7 -3.12351 | overlap 713708 ACCTTTGATGCGGTA GTGGTGCCC GAC GGGCATTAC TTGGCTATGGGAGAC TERM 750 713708 - 713720 + G 70 -9.1 -3.39142 | overlap 713704 TTGATGCGGTAGTGG TGCCC GAC GGGCA TTACTTGGCTATGGG Sde_0576 713185 - 713883 + | signal peptidase I Sde_0577 714124 - 714636 + | hypothetical protein Sde_0578 714700 - 715203 + | acetyltransferase-like Sde_0579 715208 - 715708 + | hypothetical protein Sde_0580 715832 - 718078 + | alkaline phosphatase TERM 751 718113 - 718129 + T 100 -13.7 -5.80364 | opp_overlap 718113 AGGAATGGTAAGTGA GGGCGCA TTT TGCGCCC TTTTTTTATTAACGT TERM 752 718129 - 718113 - T 91 -13.7 -2.55253 | opp_overlap 718113 AGGAATGGTAAGTGA GGGCGCA TTT TGCGCCC TTTTTTTATTAACGT Sde_0581 720630 - 718144 - | transmembrane sensor-like domain-containing protein Sde_0582 722113 - 720722 - | hypothetical protein TERM 753 721315 - 721336 + g 77 -7.3 -4.40184 | gap 1, overlap 721305 CAGGGGCGGTTAGCA GCGCTT-TGG GGG CCGCAAGCGC TTTATCTTTACTTGC TERM 754 721942 - 721962 + g 83 -6.1 -5.08878 | overlap 721938 CCTGGTTCAGGTCGG GCAGCTCCT GCC AGCAGTTGC TTTTGTTTGTGTATT Sde_0583 722834 - 722139 - | response regulator receiver domain-containing protein TERM 755 723468 - 723423 - g 100 -6.1 -6.06723 | opp_overlap 723461, overlap 723425 723427 723428 CGCTTCAAAAAAAAA GATAGCGCCTAGAATTGTAAG TTTA CCTTCAATTCTAGGCGGAGCC TCCGCTTTACGTGCA TERM 756 723465 - 723425 - g 80 -7 -4.69028 | gap 1, opp_overlap 723461, overlap 723423 723427 723428 CTTCAAAAAAAAAGA TAGCGCCTAGAATTGTAAG TTTA CCTTCAATTCTAGGCGG-A GCCTCCGCTTTACGT TERM 757 723464 - 723427 - g 95 -12.1 -3.93371 | opp_overlap 723461, overlap 723425 723423 723428 TCAAAAAAAAAGATA GCGCCTAGAATTGTAAG TTTA CCTTCAATTCTAGGCGG AGCCTCCGCTTTACG TERM 758 723463 - 723428 - g 93 -15.6 -2.93582 | opp_overlap 723461, overlap 723427 723425 723423 CAAAAAAAAAGATAG CGCCTAGAATTGTAAG TTTA CCTTCAATTCTAGGCG GAGCCTCCGCTTTAC TERM 759 723461 - 723473 + G 72 -9.1 -3.64703 | opp_overlap 723428 723427 723425 723423 TACCTTCAATTCTAG GCGGA GCC TCCGC TTTACGTGCAGAGCA Sde_0584 723082 - 723504 + | hypothetical protein Sde_0585 723554 - 724387 + | putative small-conductance mechanosensitive channel Sde_0586 724500 - 725645 + | OmpA domain-containing protein TERM 760 725652 - 725690 + F 100 -12.6 -4.29845 | ACTAAGTAAATAGTC TTGAGACTGGTGGAGG GAAATCA TCTTCGCCAGTCTCAA TTTTAACTTAGCTTA TERM 761 727283 - 727305 + G 72 -8.4 -3.77087 | GTAGGGAGTCTTGGT GGAGGTGGTG CAA CACTAACTCC TTTAAGTGTTAACTC Sde_0587 726347 - 729226 + | DEAD/DEAH box helicase-like TERM 762 729280 - 729303 + F 100 -12.4 -5.12707 | opp_overlap 729280, overlap 729279 CCACTCTATGACTAA CCGTAGCGGG TTTA CTCGCTGCGG TTTTTTGCAATTTAG Sde_0588 729351 - 730859 + | response regulator receiver domain-containing protein TERM 763 731199 - 731183 - T 100 -12.3 -4.12188 | opp_overlap 731183 TCATCAGTCTGAAAA GCCTAGG TAC CCTAGGC TTTTTATGCGCAGTT TERM 764 731183 - 731199 + T 100 -12.3 -4.84017 | opp_overlap 731183 TCATCAGTCTGAAAA GCCTAGG TAC CCTAGGC TTTTTATGCGCAGTT Sde_0589 733360 - 731243 - | glycosidases-like TERM 765 731769 - 731782 + g 76 -8.1 -4.09015 | opp_overlap 731768 731766 731769 GAAGCCAATAAATAG CTGGC AGCA GCCAG TTTATAGTGTGTTTT TERM 766 733676 - 733688 + G 70 -4.7 -4.40184 | opp_overlap 733670 733668, overlap 733670 733668 TTATAAATACACGGC GCTCG CCG CGTGC TTTATCTTTAGTTCC TERM 767 734857 - 734837 - g 72 -2.6 -5.00765 | gap 1, overlap 734838 AACTAATTATAAAAA CCAAATGGC CGAT GCC-TTTGA CTTATACCAAAAGCA Sde_0590 733653 - 735707 + | alpha-glucosidase TERM 768 735771 - 735794 + F 73 -5.2 -4.72556 | overlap 735766 TTAGCCCTATTAAAA CCTCATTGGC GATA GCTGGTGGGG TTTTCTACTTTTTAG TERM 769 736305 - 736287 - g 76 -4.4 -5.00642 | overlap 736288 CAAGGTAGATAAAAA CGCGCGCA ATT TGCGCTCT CAGCAAACCAATACC TERM 770 736480 - 736509 + G 74 -5.7 -4.62069 | gap 1, opp_overlap 736483, overlap 736483 TGGAGCGCCGAATAC GAAGACGCCAATCG AGC CGAT-GGCATCATC TTTTTAGGCTACGGC Sde_0591 736120 - 737154 + | LacI family transcription regulator TERM 771 737168 - 737217 + T 82 -5.8 -4.93365 | overlap 737176 GAATTCAATCTGGAA TTACGAGGGGCTAATCGCTAGT TGTGTT ACTGGTGGTTGGCCTTTAGTGA TTTTTCCTTCTGCAG TERM 772 737176 - 737209 + T 77 -8.2 -3.96337 | overlap 737168 TCTGGAATTACGAGG GGCTAATCGCTAGT TGTGTT ACTGGTGGTTGGCC TTTAGTGATTTTTCC Sde_0592 738010 - 737255 - | hypothetical protein TERM 773 737365 - 737390 + g 76 -2 -5.42259 | gap 2 CTGTGCGGGTGTTGG CGGTA-T-AGGT GATT ACCTGAATACCG TTTTTTTGCAGCTCG TERM 774 738015 - 737994 - G 85 -7.3 -5.03145 | gap 1, overlap 737996 738010 TAATCGTGTAAAAAA TCGCGG-GCT AAC AGCACCGCAA CGCCATCTGCGGTTA Sde_0593 738297 - 738046 - | hypothetical protein Sde_0594 738488 - 739060 + | hypothetical protein TERM 775 739083 - 739136 + T 100 -18.9 -4.66535 | opp_overlap 739084 739086 739087, overlap 739084 739085 739095 TGAATGGACTAATTA ACATCTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAGCCAA TTTCTTTTAGCAGTT TERM 776 739084 - 739135 + T 100 -22.4 -3.38836 | opp_overlap 739084 739086 739087, overlap 739083 739085 739095 GAATGGACTAATTAA CATCTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAGCCA ATTTCTTTTAGCAGT TERM 777 739135 - 739084 - T 100 -24.6 -3.41581 | opp_overlap 739084 739083 739085 739095, overlap 739086 739087 GAATGGACTAATTAA CATCTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAGCCA ATTTCTTTTAGCAGT TERM 778 739085 - 739134 + T 100 -25.9 -2.62579 | opp_overlap 739084 739086 739087, overlap 739084 739083 739095 AATGGACTAATTAAC ATCTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAGCC AATTTCTTTTAGCAG TERM 779 739133 - 739086 - T 100 -27.2 -3.27297 | opp_overlap 739085 739084 739083 739095, overlap 739084 739087 ATGGACTAATTAACA TCTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAGC CAATTTCTTTTAGCA TERM 780 739132 - 739087 - T 100 -30.7 -2.55896 | opp_overlap 739085 739084 739083 739095, overlap 739086 739084 TGGACTAATTAACAT CTAGTGCACTGCATGCGGCCC TTGT GGGCCGCATGCAGTGTACTAG CCAATTTCTTTTAGC TERM 781 739095 - 739124 + T 100 -23.7 -2.79312 | opp_overlap 739087 739086 739084, overlap 739085 739084 739083 TTAACATCTAGTGCA CTGCATGCGGCCC TTGT GGGCCGCATGCAG TGTACTAGCCAATTT Sde_0595 744156 - 739129 - | chromosome segregation ATPases-like TERM 782 739521 - 739541 + g 70 -5.3 -4.42806 | overlap 739517 GGGATTGCTTGGCTA CCTCCAACG CGG CGTTAGCGG TTTCTTTAGCGGTAA TERM 783 740242 - 740254 + g 77 -3.4 -5.17576 | TTGCGCGCTGTTAAC TGCA TCTTC TGCA TTTTTTACATTCCTC TERM 784 743062 - 743042 - G 70 -2.5 -4.9725 | opp_overlap 743042, overlap 743043 ATGGTGATATAAAAA GCTAAGCCT TCT AGGGTTAGG TTAATAGGCGCAGGT Sde_0596 746070 - 744250 - | corrinoid adenosyltransferase BtuR/CobO/CobP Sde_0597 746712 - 746182 - | hypothetical protein TERM 785 746835 - 746779 - R 100 -14.7 -3.81488 | opp_overlap 746790 746795, overlap 746795 TGGGCGTAAATATAA GGGCATGCAAATAAAAGCAGAGTCATC CAA GCTTACTCTGCTTTTATTTGCATAAGC TAAAGTATTTGAAAT TERM 786 746790 - 746824 + r 90 -11.6 -3.65902 | opp_overlap 746779 746795, overlap 746795 ATAAGGGCATGCAAA TAAAAGCAGAGTCATC CAA GCTTACTCTGCTTTTA TTTGCATAAGCTAAA TERM 787 746795 - 746819 + r 85 -7.1 -4.90778 | opp_overlap 746795 746779, overlap 746790 GGCATGCAAATAAAA GCAGAGTCATC CAA GCTTACTCTGC TTTTATTTGCATAAG TERM 788 746819 - 746795 - R 85 -7.1 -4.90778 | opp_overlap 746790 746795, overlap 746779 GGCATGCAAATAAAA GCAGAGTCATC CAA GCTTACTCTGC TTTTATTTGCATAAG TERM 789 747108 - 747148 + r 100 -15.6 -4.79384 | opp_overlap 747112, overlap 747112 AATCCGGTATAACAA TAAACAGCGCCTCCTACT CGGTA AGTAAGGGGCGCTGTTTG TTTTAGTTTTGTTGT TERM 790 747112 - 747144 + r 100 -14.2 -4.86613 | opp_overlap 747112, overlap 747108 CGGTATAACAATAAA CAGCGCCTCCTACT CGGTA AGTAAGGGGCGCTG TTTGTTTTAGTTTTG TERM 791 747144 - 747112 - R 100 -14.9 -4.51812 | opp_overlap 747108 747112 CGGTATAACAATAAA CAGCGCCTCCTACTC GGT AAGTAAGGGGCGCTG TTTGTTTTAGTTTTG Sde_0598 748884 - 747151 - | Alpha-L-arabinofuranosidase TERM 792 749341 - 749365 + r 82 -8 -4.48221 | gap 1, overlap 749345 AGGTTTGTCATCAGT TTAA-GGCGCA TCCA TGCGCCCTTAA TTTTATAACTTACTG TERM 793 749345 - 749360 + r 75 -10.4 -2.84989 | overlap 749341 TTGTCATCAGTTTAA GGCGCA TCCA TGCGCC CTTAATTTTATAACT Sde_0599 750880 - 749375 - | transporter, putative TERM 794 749777 - 749762 - G 88 -6 -5.4756 | AATGGGAATAAAAAA CGCAGC TAGC GCAGCG AAGGCATTGTAGGCA TERM 795 750941 - 750914 - R 70 -7.8 -3.58726 | overlap 750917 TGTTGGTATATACAA TAGTGGGCAATA AAAA CATTGCCCAATA AACAAAAAAACCTTG TERM 796 750975 - 750952 - R 100 -10.3 -6.08342 | CAATAAACAAAAAAA CCTTGGCAC AATTAA GCGCCAAGG ATGGATGAAAGTAAA Sde_0600 753421 - 751010 - | glucan 1,4-alpha-glucosidase TERM 797 751345 - 751332 - G 72 -5.9 -4.41348 | TCGCCGGTAAAGAAA GGCCA AATG CGGCC GCGTTGGTCTGGGTG TERM 798 753289 - 753312 + g 77 -11.6 -2.91144 | overlap 753286 753304 753307 AAGCCCAAGTGGGGG CTGCGCCTGG GGCG CCTGGCGCGG TAGTTTGCGCGCTGG TERM 799 753832 - 753850 + G 70 -2.5 -5.09225 | gap 1, overlap 753832 753833 CAGTTTAGGTGTTGA T-GCGATA TGGA TATCGCCA TTTTTTAAATCGCCT TERM 800 755270 - 755283 + G 74 -3.7 -5.00616 | opp_overlap 755270 ACTCAAATCACATTA CCTCC TTTT GGCGG TTTTTTCGCCAAGCA Sde_0601 753692 - 755314 + | alpha-glucosidase TERM 801 755358 - 755376 + F 100 -14.6 -5.71712 | AATAAGTACTCTTTA CTGCGGAC ATT GTCCGCAG TTTTTTTATCTGCCC TERM 802 756948 - 756972 + G 78 -6.5 -4.56597 | opp_overlap 756950, overlap 756950 TAACGGCCGTGAATT TACTTTTACCT TTA AGGTAGAAGAA TTTTTACCCGAGCGC Sde_0602 755536 - 760449 + | 6-phosphogluconate dehydrogenase, decarboxylating TERM 803 760684 - 760704 + G 70 -8.9 -3.38314 | opp_overlap 760684, overlap 760682 760685 AGGTAGTGGTAGATA GTCGCGGCG AAC CGCTGCGAG TCTTTGCCGATTCAA TERM 804 760685 - 760703 + G 78 -12.4 -2.62667 | opp_overlap 760684, overlap 760684 760682 GGTAGTGGTAGATAG TCGCGGCG AAC CGCTGCGA GTCTTTGCCGATTCA TERM 805 761315 - 761305 - g 80 -6.8 -4.58283 | TAAGCGCCCCAAAAA CAGC ACC GCTG TTAGCCCGCAGGTTA TERM 806 761770 - 761780 + G 79 -8.2 -4.3739 | opp_overlap 761762 TATTAGATGCCCTAG GGCC ACA GGCC TTTTATGCGCGACTA TERM 807 762861 - 762876 + G 82 -2.6 -5.47159 | overlap 762851 762853 ATGGATGCCGCCGGG CGATTT GATG AAATTG TTTTTTATGTTGGGG Sde_0603 760473 - 762896 + | bifunctional penicillin-binding protein 1C Sde_0604 763717 - 763914 + | protein YjbJ TERM 808 763977 - 764015 + F 100 -14.1 -3.98214 | gap 1, opp_overlap 763984 CAGGCCTGCCGTTTT CACCCAAGGCATTACC CTTTATTT GGTAA-GCCTTGGGTG TTTCTCATAAATCGT TERM 809 764381 - 764394 + F 71 -6.7 -4.10164 | opp_overlap 764376 ACTGTTAATACTGTG CTCTG GAAG CAGAG TTTATCTGATGCTGG Sde_0605 764673 - 765128 + | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 810 765276 - 765332 + F 75 -5.2 -4.81083 | gap 2, opp_overlap 765276 AAACTCAAAGAAAAA CTCAAGACACCCACGCATTAGCAGGTAG CTG CTCCCT-C-AACGCGTGCCTGTCCTGAG TTTTTGCTGATTAAG TERM 811 765332 - 765276 - f 100 -9.6 -5.34381 | gap 2, opp_overlap 765276 AAACTCAAAGAAAAA CTCAAGACACCCACGCATTAGCAGGTAG CTG CTCCCT-C-AACGCGTGCCTGTCCTGAG TTTTTGCTGATTAAG Sde_0606 765375 - 765821 + | hypothetical protein TERM 812 765876 - 765892 + T 100 -10.8 -5.26119 | AGACACCCACTCGAA GCCCGG CCAGT CCGGGC TTTTCTTTTTAGCCG TERM 813 766028 - 766063 + T 93 -2.6 -5.97979 | ACAAACAATTAGAGA CAGGCATGAGTTAA GGGGGATA TTAGCTACTGCCTG TTTTTTTATTGTTGT Sde_0607 767182 - 766205 - | hypothetical protein TERM 814 768718 - 768708 - g 74 -5.4 -4.69622 | opp_overlap 768708 ACATAACTCTAAAAA CAGT ACT ACTG TAATTAAAGGCGGCT Sde_0608 767689 - 769047 + | hypothetical protein TERM 815 769097 - 769070 - T 90 -12.8 -2.52987 | opp_overlap 769076, overlap 769076 TTAAGAGTCAGTAAC TAAAAACCCCGC AATA GCGGGGTTTTTT ATGGTTGCTTGTTAG TERM 816 769091 - 769076 - T 100 -11.8 -4.90266 | opp_overlap 769076, overlap 769070 GTCAGTAACTAAAAA CCCCGC AATA GCGGGG TTTTTTATGGTTGCT TERM 817 769076 - 769091 + T 100 -11.8 -5.38249 | opp_overlap 769076 769070 GTCAGTAACTAAAAA CCCCGC AATA GCGGGG TTTTTTATGGTTGCT Sde_0609 771260 - 769164 - | hypothetical protein TERM 818 769949 - 769937 - G 70 -4.7 -4.44608 | overlap 769934 769938 CTGAGCGAAAAATAA CGCCC GGT GGGCC GCCAGCTAATAATGT TERM 819 770331 - 770315 - G 76 -4.3 -4.9792 | GATCCGACACAAAAA GGGTTGC GCC ACTACCC GCAAGTACAAATTTT Sde_0610 772222 - 771317 - | hypothetical protein TERM 820 772017 - 772032 + g 76 -4.6 -5.055 | GAATTTGGGTTGCGT TGCGCG TAGG CGAGCA TTTTTTCAAGGTTAG TERM 821 772681 - 772664 - R 83 -11.3 -3.06796 | opp_overlap 772664 TTGTAGGGTACCTAA TCGAGCC ATAC GGCTCGA TTAGGTAAAGGTAGG TERM 822 772664 - 772681 + r 83 -11.3 -3.06183 | opp_overlap 772664 TTGTAGGGTACCTAA TCGAGCC ATAC GGCTCGA TTAGGTAAAGGTAGG Sde_0611 773707 - 772787 - | hypothetical protein TERM 823 773109 - 773123 + g 76 -5 -4.73388 | CCTTTTGTATCGCGG TAATGC AAC GCATTG TTTTTGGTAAGGGTT TERM 824 773992 - 774011 + H 70 -2.8 -4.91511 | gap 1, opp_overlap 773992, overlap 773992 773995 AGAGGTTAAAAACAT CC-ACTGCT GTT AGCTGTAGG TTTTTATGGTCGCAT Sde_0612 774234 - 774872 + | hypothetical protein Sde_0613 775024 - 775770 + | adenylyltransferase TERM 825 775786 - 775797 + F 89 -7.2 -5.0809 | opp_overlap 775785 GTGAACGAATTCAAT GCGC AATA GCGC TTTTTCTAATTTATT TERM 826 775938 - 775927 - g 74 -3.6 -5.09204 | AGATGGCAAGAAAAA CCCG CTAA CAGG CTATGAGCTTGGCCA Sde_0614 775829 - 777019 + | SAM-dependent methyltransferase TERM 827 777038 - 777069 + T 100 -10.2 -4.45771 | opp_overlap 777037 777038 777039, overlap 777039 777040 ATCGCTAATTAAAAG TTGCTAATCGCTAG GGGG CTGGCGATTAGCCG TTTATGTTTTAGCGT TERM 828 777039 - 777068 + T 86 -11.5 -3.26378 | opp_overlap 777037 777038 777039, overlap 777038 777040 TCGCTAATTAAAAGT TGCTAATCGCTAG GGGG CTGGCGATTAGCC GTTTATGTTTTAGCG TERM 829 777040 - 777067 + T 100 -15 -2.55104 | opp_overlap 777037 777039 777038, overlap 777039 777038 CGCTAATTAAAAGTT GCTAATCGCTAG GGGG CTGGCGATTAGC CGTTTATGTTTTAGC Sde_0615 777973 - 777092 - | hypothetical protein TERM 830 777521 - 777538 + g 80 -6.3 -4.87626 | gap 1, overlap 777524 TTGATCCACACCGTA CTCGGGCA TCA TGCCC-AG TTTTTGATATTCCGC TERM 831 778142 - 778127 - R 100 -10.4 -5.45652 | opp_overlap 778127 ACGGCCAATAAAAAA CCCAGC GTGT GCTGGG TTTTGCAAAAAAGCT TERM 832 778127 - 778142 + r 91 -10.4 -4.07687 | opp_overlap 778127 ACGGCCAATAAAAAA CCCAGC GTGT GCTGGG TTTTGCAAAAAAGCT TERM 833 778537 - 778556 + r 71 -8.6 -3.52906 | TGTAAACGCCGCGCT TACCTGTG TAGT CGCAGGTA TCTTTATCGCCGTCA Sde_0618 781827 - 780820 - | oligopeptide transporter OPT TERM 834 781812 - 781798 - G 74 -7 -4.20516 | overlap 781799 GTGGTAGCCAATAAA GCCGGC TGC GCCGGT AACCAATACTTTCAT TERM 835 781811 - 781799 - G 74 -10.5 -3.11988 | overlap 781798 TGGTAGCCAATAAAG CCGGC TGC GCCGG TAACCAATACTTTCA Sde_0619 783114 - 781831 - | cellulose binding, type IV TERM 836 783484 - 783498 + G 72 -6.4 -4.27316 | overlap 783473 783472 GTGTTCCGCCATTCA GGCGAA GTC TTTGCC TTTTACATTGCGCGG Sde_0620 783386 - 784564 + | ATP-dependent RNA helicase RhlB TERM 837 784581 - 784608 + F 100 -12.2 -4.34402 | gap 1, opp_overlap 784581 CCCCCCCATATCAAA CCGTTCAATTAGC GTC GCTA-TTGAACGG TTTTAGTGTGAAACG TERM 838 784608 - 784581 - f 100 -12.2 -3.83026 | gap 1, opp_overlap 784581 CCCCCCCATATCAAA CCGTTCAATTAGC GTC GCTA-TTGAACGG TTTTAGTGTGAAACG TERM 839 785350 - 785376 + G 87 -14.4 -2.88579 | ATCTCATTATGATTG GCTTGTCGTCGG AAA CCGACGGCACGC TCTCTGCAAAATTCA TERM 840 785684 - 785696 + G 71 -3.3 -4.83269 | CGATGTAGTGATGGA GCAAG TAT CTAGC TTTTTAGTATCGTCT Sde_0621 784740 - 785987 + | response regulator receiver modulated diguanylate cyclase Sde_0622 787336 - 786017 - | alkaline phosphatase TERM 841 787048 - 787035 - G 72 -8.1 -3.66288 | TAGTGTTCAACACAA TGGCG CTGA CGCCA ACTCTTGGGGTCGAT TERM 842 787147 - 787159 + g 76 -4.7 -4.7497 | overlap 787144 787142 GCTTGGGTATCAGCG CGCTG CGA CTGCG TTTTTCGTCAATAAA TERM 843 787580 - 787590 + H 76 -6.8 -4.56314 | opp_overlap 787575, overlap 787575 AGGAATAGAGCGAGA CTGC TAA GCAG TTTTGATTATATTGA Sde_0623 788217 - 789023 + | hypothetical protein TERM 844 789031 - 789052 + T 73 -7.3 -4.12296 | CGTTCTAAATCGCGA TAGGGCAGT TGTA GTTGCCCTA TTATTTACTTGTCGA Sde_0624 789944 - 789057 - | hypothetical protein TERM 845 789174 - 789148 - G 75 -2.8 -5.14563 | overlap 789149 CCGTGCATTAAAAAA CGTTGGCCTAGG TTC CACGGGCCAACT AAATAATGCGGGTAT Sde_0625 790614 - 789934 - | hypothetical protein Sde_0626 791798 - 790686 - | 3-oxoacyl-(acyl carrier protein) synthase III Sde_0627 792390 - 791824 - | diguanylate cyclase/phosphodiesterase TERM 846 792937 - 792919 - H 74 -10.4 -2.62184 | opp_overlap 792926 GCGTGGTTTACATCA TTATACGC AGT GCGTATAA CGTGCAGTCTGATTT Sde_0628 793004 - 794920 + | Outer membrane cobalamin receptor protein-like TERM 847 795015 - 794987 - f 100 -12.4 -3.74077 | gap 1, opp_overlap 794987 GCGCATATATGCAAA TGCCGC-CCCCGC TTCT GCGGTGTGCGGCA TTTTTGTTTATACTA TERM 848 794987 - 795015 + F 100 -12.4 -5.40464 | gap 1, opp_overlap 794987 GCGCATATATGCAAA TGCCGC-CCCCGC TTCT GCGGTGTGCGGCA TTTTTGTTTATACTA Sde_0629 795077 - 795730 + | cob(I)yrinic acid a,c-diamide adenosyltransferase / PAS/PAC sensor signal transduction histidine kinase Sde_0630 795727 - 796770 + | response regulator receiver domain-containing protein TERM 849 797330 - 797359 + G 77 -10.8 -3.46965 | gap 1, overlap 797331 TGGTTATATTGCTTC TGGCCAA-CAGCG TAAGT CGCTGGTTGGCCG TTGTGCTAATGTATT TERM 850 797331 - 797358 + G 76 -12.1 -2.67456 | gap 1, overlap 797330 GGTTATATTGCTTCT GGCCAA-CAGCG TAAGT CGCTGGTTGGCC GTTGTGCTAATGTAT Sde_0631 796774 - 797682 + | cobalamin-5'-phosphate synthase Sde_0632 797760 - 798293 + | phosphoglycerate mutase TERM 851 798274 - 798288 + T 73 -8.6 -3.57462 | opp_overlap 798267 TGCATATAGGCTTCG GCGAAA TTA TTTCGC TTTAGCCGTGGCCTA TERM 852 798350 - 798337 - T 100 -9.5 -5.83226 | opp_overlap 798337 AAGCGAATAAAAAAA GGGGC CGAG GCCCC TTTTAAAATGCTGTA TERM 853 798337 - 798350 + T 85 -9.5 -4.16279 | opp_overlap 798337 AAGCGAATAAAAAAA GGGGC CGAG GCCCC TTTTAAAATGCTGTA Sde_0633 799724 - 798414 - | hypothetical protein TERM 854 800898 - 800888 - g 82 -6.8 -4.84359 | TTATCGTTAGAAAAA CTGC AAA GCAG TGATGCTCAGTTCGA Sde_0634 800285 - 801646 + | hypothetical protein TERM 855 801668 - 801689 + T 75 -8.7 -3.58522 | opp_overlap 801668 TTTAAAAATAAAAAA GCTTGGGTT TTTA GGCCCAAGC TTTCCAAGTACTACT TERM 856 801689 - 801668 - T 100 -7.3 -5.93252 | opp_overlap 801668 TTTAAAAATAAAAAA GCTTGGG TTTTTAGG CCCAAGC TTTCCAAGTACTACT Sde_0635 803168 - 801714 - | 6-phosphogluconate dehydrogenase TERM 857 803669 - 803686 + H 73 -8.5 -3.64685 | ATAGTCCACCGCTAG TTGCCAT TTGT ATGGCAA TTCTTAAGCGGTTTT TERM 858 803821 - 803806 - g 74 -10.4 -3.17054 | opp_overlap 803801 803801 CACTAAATTAGCTAA CTCGGC CAAG GCCGAG GTGGGCTTTACCAAA TERM 859 804597 - 804578 - g 75 -2.8 -5.15634 | opp_overlap 804578 804582, overlap 804582 TATTTTATTAAAAAA TCTACCGC TGCA ACGCTAGA TTTTGCCGCGGTTAT TERM 860 804635 - 804651 + G 72 -6.5 -4.3129 | opp_overlap 804634 GCAAGCCGAGTATAC GCACCGT TCG AAGGTGC TTTTCCTGGTAAATC Sde_0636 803723 - 805459 + | cellulase TERM 861 805469 - 805507 + T 72 -8 -3.79882 | overlap 805468 805476 TTGTAGCGTGCCTTT TGCGTAGCCTGCGCAGTG TTT TGCTGCGCGGGTTTAGCG TTTACTGGCTGTTGT TERM 862 805476 - 805500 + T 93 -12.1 -3.73107 | overlap 805468 805469 GTGCCTTTTGCGTAG CCTGCGCAGTG TTT TGCTGCGCGGG TTTAGCGTTTACTGG Sde_0637 806383 - 805502 - | metal dependent phosphohydrolase TERM 863 806208 - 806231 + g 76 -8.2 -4.09511 | gap 1, opp_overlap 806212 TATTCCCCCGCCTGA GTAAGG-CGCA GCT TGCGACCTTGC TTTTGCCAAAGTGTT TERM 864 807548 - 807527 - g 76 -5.1 -4.84527 | overlap 807528 TGCAGATATTAAAAA CTGGTTGGC GTTT GCCAAACAA AAACTGCAAGAACTA TERM 865 807843 - 807833 - g 76 -2.4 -5.32699 | TGAAATACGAAAAAA CCGC AAA GCGT TTAAAAGTGGGGAAA Sde_0638 806475 - 808772 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 866 808773 - 808802 + T 95 -13.1 -2.94416 | overlap 808775 808779 GCAGAAGTGGCTTAG CGGTAACTTTAGT TGGC ACTAAAGTTACTG TGTATAGTGAAAGTA TERM 867 808775 - 808800 + T 86 -12.1 -3.02471 | overlap 808773 808779 AGAAGTGGCTTAGCG GTAACTTTAGT TGGC ACTAAAGTTAC TGTGTATAGTGAAAG TERM 868 808867 - 808905 + T 77 -4.5 -4.99043 | AGTAGGAAATTAGAT TTTTCGCACGTGCTAGT GTTAA GCGTGTGCGTGCGGAAA TTTTATTTATAGAGC Sde_0639 809322 - 809002 - | hypothetical protein Sde_0640 810217 - 809342 - | pirin-related protein Sde_0641 810673 - 811470 + | hypothetical protein Sde_0642 812144 - 811482 - | hypothetical protein Sde_0643 812682 - 812203 - | hypothetical protein Sde_0644 814691 - 812898 - | hypothetical protein TERM 869 813090 - 813102 + g 71 -7.7 -3.86346 | CACTGTTCCGTGCTC TGGCA ATT TGCCA TTTATAAGAAACTCC Sde_0645 815431 - 815057 - | hypothetical protein TERM 870 815532 - 815514 - R 75 -3 -5.08178 | overlap 815515 ATAGAGATATAAAAA GCAGCTCA CGC TGGGCTGG GGCGGAAGATGCGAA Sde_0646 816284 - 815748 - | nucleoprotein/polynucleotide-associated enzyme TERM 871 815973 - 815987 + g 72 -8.6 -3.69354 | AACATGCACTTTTTT GATGGT TGT ACCATC TTTGAAGTTATAGGC TERM 872 816472 - 816489 + H 74 -4.7 -4.84359 | opp_overlap 816467, overlap 816468 816473 GTTTATCATAGCGGC TGCGCCG TTGG TGGCGCC TTTTTATAGGAATAC TERM 873 816473 - 816488 + H 71 -8.2 -3.50133 | opp_overlap 816467, overlap 816468 816472 TTTATCATAGCGGCT GCGCCG TTGG TGGCGC CTTTTTATAGGAATA Sde_0647 816509 - 817903 + | ATP-dependent RNA helicase DbpA Sde_0648 817918 - 818280 + | hypothetical protein TERM 874 819577 - 819591 + G 95 -11.4 -4.41616 | overlap 819576 819586 819587 CGTTGCGGCCACAGG CGCGCA GTG TGCGCG TTTATTTGACGAAAT Sde_0649 818612 - 821215 + | cellulose 1,4-beta-cellobiosidase TERM 875 821244 - 821261 + F 100 -9.8 -5.86465 | TGTTGTACCCCCTTA GCCCGC CGAGTT GCGGGC TTTTTTTATATTATT TERM 876 821595 - 821577 - f 74 -4.6 -4.8048 | TGCTTATACTAAAAA CATTAAGT CAA ACTAAATG CTAGTTTAGAAGGTT TERM 877 821750 - 821740 - f 73 -2.6 -5.1861 | overlap 821748 TGTATTAGTAAAAAA TTAT CAA ATAA TAAAATTAAAAAATT TERM 878 822143 - 822130 - g 72 -5.2 -4.57569 | overlap 822132 CCAGGGGGCCAAAAA CGGC GGCAGT GCCG AAGTGCCCGTTGTTA Sde_0650 821795 - 823471 + | RhoGEF guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases-like TERM 879 823520 - 823496 - T 100 -12.9 -3.80094 | opp_overlap 823496 TTTAAATTAACATAA GGCTACTGCGT TAA ATGCAGTAGCC TTTTATTTCCCCGCA TERM 880 823496 - 823520 + T 100 -15.1 -4.86731 | opp_overlap 823496 TTTAAATTAACATAA GGCTACTGCGT TAA ATGCAGTAGCC TTTTATTTCCCCGCA Sde_0651 825638 - 823620 - | OPT family oligopeptide transporter TERM 881 824639 - 824653 + g 76 -7.8 -4.36914 | overlap 824637 ATACCTCATTGCTGC CGGCAG CGC TTGCCG TTTTATAAGCCGCAA TERM 882 825034 - 825007 - G 86 -2.7 -5.63517 | overlap 825018 CCCGTAAATAAAAAA CTGCCAGCAAA CCACGC TTTGGTGGTAG CCACACTACCGGCCA Sde_0652 827563 - 825854 - | Beta-glucanase/Beta-glucan synthetase-like TERM 883 827134 - 827148 + g 80 -7.2 -4.58283 | opp_overlap 827142 TATCGTAGGTGCCGG CAGTTA AAG TAACTG TTTTTGAAACGGTTA TERM 884 828989 - 829017 + G 71 -3.8 -4.73613 | gap 1, opp_overlap 828990 828991, overlap 828990 828991 GGCGCAGCCGCTACA ATTG-TACCGCCC CAGC GGGCGGTGGCAGG TTTTATTGGTACTCA Sde_0653 827992 - 829083 + | regulatory protein, LacI Sde_0654 830081 - 829080 - | delta-aminolevulinic acid dehydratase TERM 885 829796 - 829806 + g 72 -8.2 -3.8046 | opp_overlap 829795 CTTCTGGGTTAAACG CGGC ATC GCCG TTTAAGGTTTTTAAA TERM 886 830197 - 830177 - H 72 -9.7 -2.83403 | overlap 830176 830190 TGGCTGCGAGTAAAT GCCTGCG AAGTAAG CGCAGGC CATACGCAGTTAAAA TERM 887 830844 - 830834 - g 76 -8.2 -4.08216 | opp_overlap 830833 TTACCGGCGTTAAAA CCCG TGC CGGG GTGCTATCTATAAGT TERM 888 831353 - 831365 + G 70 -4.8 -4.42062 | CGCCCAATGCTCAGA GCCA TGTAC TGGC TTTATTTAGCGAATC Sde_0655 830356 - 832053 + | alkaline phosphatase TERM 889 832077 - 832099 + F 74 -6.2 -4.5774 | overlap 832076 TAGTTGTGTTTTTGT GGCCCTGC TAATTCT GTGGGGCC TTTTAATTCTTCATA TERM 890 832508 - 832520 + F 87 -5.5 -5.47399 | opp_overlap 832508 TACCCTAAAATGTAA CCGGT TGC ACTGG TTTTTTTGCCCTTGC TERM 891 832578 - 832552 - f 76 -10.3 -2.94354 | gap 1 CTACACATGTAGAGA GGATACTGCGTC GCCA GACGCA-TATCC AAAACCAATAATAAT TERM 892 833138 - 833126 - g 72 -4.7 -4.65895 | opp_overlap 833126 GCGGCTATTCAAAAA CTGCG CAA CGCCG GTTATACCCACACCC TERM 893 833406 - 833418 + G 72 -5.5 -4.43477 | CCATTATGCAATACG CCGAG CAA TTCGG TTTTGGTTACATGGG Sde_0656 832613 - 834136 + | phospholipid/glycerol acyltransferase TERM 894 834200 - 834179 - T 86 -8 -4.70659 | opp_overlap 834179 GCTGACAGCGAAAAA CCGACAGA TTTGTT TCTGCCGG TTTTTTTAATGGGCG TERM 895 834179 - 834200 + T 90 -5.8 -5.52384 | opp_overlap 834179 GCTGACAGCGAAAAA CCGACAGA TTTGTT TCTGCCGG TTTTTTTAATGGGCG Sde_0657 835099 - 834206 - | LysR family transcriptional regulator TERM 896 835388 - 835427 + G 70 -10.6 -2.56715 | opp_overlap 835402, overlap 835384 CTTCACTATGATGGG GTTGGCGCAGGATAGCGG TCGG CCGCTGTTGCGCGCCTAC TCAATTACTAGCGCT Sde_0658 835266 - 836042 + | ferredoxin--NADP(+) reductase TERM 897 836128 - 836146 + F 72 -9.6 -3.10732 | opp_overlap 836119 836116, overlap 836120 836117 836132 AAAGCAGCCCATTGG GCAACCAT GGG GTGGTTGC TATTAAACTTCATAT Sde_0659 836334 - 837053 + | SapC protein, putative TERM 898 837081 - 837095 + F 100 -11.4 -5.64274 | opp_overlap 837081 TCGATATACCCTAAA GCCGCA TAT TGCGGC TTTTTTTATGCCTAA TERM 899 837095 - 837081 - f 90 -11.4 -3.65425 | opp_overlap 837081 TCGATATACCCTAAA GCCGCA TAT TGCGGC TTTTTTTATGCCTAA TERM 900 837333 - 837353 + F 73 -2.5 -5.1861 | overlap 837333 837334 AGTCTTCTACTAGTG TCTCCTGTT GTA AAGGGGAGG TTTTTTAGTGGTAAA Sde_0660 837361 - 839928 + | triosephosphate isomerase Sde_0661 841547 - 839940 - | malate dehydrogenase TERM 901 841151 - 841173 + g 74 -5.5 -4.66938 | gap 1, overlap 841150 841151 TAAGCCTTACATCTT GCTC-TGGCC AATT GGCCAAGCGC TTTTGTATTAAGCCT TERM 902 841981 - 841993 + G 70 -9.1 -3.30474 | opp_overlap 841981 841979 TTAGCGAAGAATATA TGCCC CAC GGGCA TTGCTACTTATGGCG TERM 903 843658 - 843670 + G 70 -9.1 -3.41878 | opp_overlap 843658 843653 TCAACAATCAGTACA CCCGT ATT ACGGG TTATACATTGGAGGA Sde_0662 841917 - 844673 + | PAS/PAC sensor signal transduction histidine kinase Sde_0663 844767 - 845201 + | response regulator receiver domain-containing protein TERM 904 845975 - 845946 - g 93 -10.1 -4.57073 | opp_overlap 845945 845953, overlap 845933 845947 TATTGTTGCTAAAAA GCATCAAGAGCTA ATTG CAGCTCTTGATGA ATATGTGATTAGTCA TERM 905 845974 - 845947 - g 90 -13.6 -3.33922 | opp_overlap 845945 845953, overlap 845933 845946 ATTGTTGCTAAAAAG CATCAAGAGCTA ATTG CAGCTCTTGATG AATATGTGATTAGTC Sde_0664 845224 - 846147 + | response regulator receiver modulated diguanylate cyclase TERM 906 846145 - 846175 + T 100 -12.8 -3.5456 | opp_overlap 846149, overlap 846149 CTTACTGGTAAGGCG TAAAGCGTACCT ATTAACA AGGTACGCTTTA TTGATTATTACCCTT TERM 907 846171 - 846149 - T 78 -9.2 -3.60792 | opp_overlap 846149 846145 CTGGTAAGGCGTAAA GCGTACCT ATTAACA AGGTACGC TTTATTGATTATTAC TERM 908 846149 - 846171 + T 88 -9.2 -4.39877 | opp_overlap 846149, overlap 846145 CTGGTAAGGCGTAAA GCGTACCT ATTAACA AGGTACGC TTTATTGATTATTAC Sde_0665 846650 - 846183 - | ferritin and Dps TERM 909 846819 - 846846 + r 81 -11.4 -2.85585 | opp_overlap 846826, overlap 846826 GTCGAAAGCGTAGGC AAAAAAAGGGGC CGAA GCCCCTTTTTTA TAATATGTTTTAAAC TERM 910 846826 - 846839 + r 100 -9.5 -5.35459 | opp_overlap 846826, overlap 846819 GCGTAGGCAAAAAAA GGGGC CGAA GCCCC TTTTTTATAATATGT TERM 911 846839 - 846826 - R 100 -9.5 -5.47218 | opp_overlap 846826 846819 GCGTAGGCAAAAAAA GGGGC CGAA GCCCC TTTTTTATAATATGT Sde_0666 847589 - 846867 - | peptidase S41 TERM 912 847906 - 847917 + H 72 -7.2 -3.93583 | AGCGCTTCTAGCTGT GCGC TTAG GCGC TTTGTAACTAAATTA TERM 913 848250 - 848269 + G 76 -7.8 -4.29738 | overlap 848245 848251 TTTATGTGGTTTGGC GGCGCCAA TGGC TTGGCGCG TTTTGATGGGTATGA TERM 914 848251 - 848268 + G 77 -11.3 -3.17361 | overlap 848245 848250 TTATGTGGTTTGGCG GCGCCAA TGGC TTGGCGC GTTTTGATGGGTATG TERM 915 851253 - 851285 + G 79 -2 -5.48028 | overlap 851253 851273 CACGGCGGTACCATT GG-GGTGCGCTCTACC CTA GGTAAAG-GTGCCACC TTTTATTTTTATTTA TERM 916 851273 - 851290 + G 76 -2.1 -5.31519 | gap 1, overlap 851253 851253 GCGCTCTACCCTAGG T-AAAGGT GCC ACCTTTTA TTTTTATTTACCTCT TERM 917 852058 - 852048 - g 76 -8.2 -4.08064 | opp_overlap 852057, overlap 852049 AAGGGGTGGGTAAAA GGCG ACG CGCC GCTTGCTAGCGATCT Sde_0667 848025 - 852605 + | response regulator receiver domain-containing protein Sde_0668 852720 - 853499 + | putative salt-induced outer membrane protein TERM 918 853512 - 853536 + T 72 -10.1 -2.75481 | overlap 853512 TAGGGTTTACAGTCG CTAGTGACTAG TCA CTAGTTGCTAG TAATTAGAGTTAAGA TERM 919 853546 - 853581 + T 100 -14.2 -3.32963 | opp_overlap 853550 853555, overlap 853555 TGCTAGTAATTAGAG TTAAGAAAAGGCGCTC ATTT GAGCGCCTTTTTTAAA TTATCACATCAAAGT TERM 920 853577 - 853550 - T 95 -12.8 -3.16534 | opp_overlap 853546 853555, overlap 853555 AGTAATTAGAGTTAA GAAAAGGCGCTC ATTT GAGCGCCTTTTT TAAATTATCACATCA TERM 921 853572 - 853555 - T 100 -12.7 -4.70169 | opp_overlap 853546 853555, overlap 853550 TTAGAGTTAAGAAAA GGCGCTC ATTT GAGCGCC TTTTTTAAATTATCA TERM 922 853555 - 853572 + T 100 -12.7 -5.1925 | opp_overlap 853555 853550, overlap 853546 TTAGAGTTAAGAAAA GGCGCTC ATTT GAGCGCC TTTTTTAAATTATCA Sde_0669 854680 - 853577 - | phosphoribosylaminoimidazole-succinocarboxamide synthase Sde_0670 855967 - 854807 - | metal dependent phosphohydrolase TERM 923 856643 - 856632 - g 80 -5.8 -5.04597 | AGCTACAGAGAAAAA GCAC AGAA GTGC TCACCACTATGAACG TERM 924 857595 - 857617 + G 72 -10.6 -2.88999 | opp_overlap 857586 857584 857583 AAATGAGCACCTTAA TTGCTACTGC ATC GCAGCAGCAA TCTCATGTGTCGCAC Sde_0671 856178 - 857773 + | putative methyl-accepting chemotaxis sensory transducer Sde_0672 857816 - 858712 + | hypothetical protein TERM 925 859933 - 859943 + G 72 -3.2 -5.05113 | AGAGCCTACCCCATT TGGT TGC ACCG TTTTATTTATGTCGG Sde_0673 859087 - 860802 + | hypothetical protein TERM 926 860896 - 860915 + T 76 -10.7 -2.57067 | opp_overlap 860891, overlap 860892 AGGGAGTAGACGTTA GCCCCCA AAAGGG TGGGGGC TAGGTTAAATCTTAG Sde_0674 861220 - 860927 - | hypothetical protein Sde_0675 861645 - 861313 - | hypothetical protein Sde_0676 861793 - 862344 + | hypothetical protein Sde_0677 862360 - 863163 + | chitooligosaccharide deacetylase-like TERM 927 863206 - 863233 + G 72 -6.2 -4.21676 | gap 1, overlap 863206 AACCGAATCCACTAT GAT-GGCGCTGGG CAG CCCAGCCCCAAGC TTTTCGCTGCCTTCT Sde_0678 863183 - 863767 + | hypothetical protein Sde_0679 863897 - 864166 + | hypothetical protein TERM 928 864182 - 864207 + T 86 -11.8 -3.01416 | opp_overlap 864179 864178 TAGACGTTAAAGCTG CGGCCCTGGG CCTATA CACAGGGCCG TGTCTATAGCTGCTC Sde_0680 864531 - 864211 - | XRE family transcriptional regulator TERM 929 865054 - 865038 - g 79 -3 -5.40072 | CTGCCGGTAAAAAAA CTTATC GCTTA GACAAG GTTGAGTTGTTTGAT Sde_0681 864893 - 865828 + | hypothetical protein TERM 930 865887 - 865900 + F 100 -9.5 -5.49234 | CACTCTTCTTTAAGG GCGCC TTCG GGCGC TTTTTTATTGCCTGT TERM 931 866027 - 866040 + F 84 -3.7 -5.47399 | opp_overlap 866027, overlap 866028 CTTTGTTTTCAAGGA GGCCC TGAT GGGCA TTTTTTTGGGGTTGA TERM 932 866028 - 866039 + F 70 -7.2 -3.87355 | opp_overlap 866027, overlap 866027 TTTGTTTTCAAGGAG GCCC TGAT GGGC ATTTTTTTGGGGTTG TERM 933 866058 - 866071 + F 81 -5.3 -5.20781 | TTTTTGGGGTTGAGG GGTAA ACGT TTACC TTTTGTTTTCTGATA Sde_0682 866249 - 868975 + | TonB-dependent receptor TERM 934 868976 - 869016 + F 88 -9.2 -4.30416 | gap 1, opp_overlap 868984, overlap 868984 AGCTGGAAGCTGTAA TCACA-CAAGGCCAGTTAG GCAA CTAACTGGCCTTCCTGTAA TTTTCCATTCCTAAT TERM 935 869007 - 868984 - f 100 -15.4 -3.59946 | opp_overlap 868976 868984 GCTGTAATCACACAA GGCCAGTTAG GCAA CTAACTGGCC TTCCTGTAATTTTCC TERM 936 868984 - 869007 + F 100 -15.4 -3.37531 | opp_overlap 868984, overlap 868976 GCTGTAATCACACAA GGCCAGTTAG GCAA CTAACTGGCC TTCCTGTAATTTTCC Sde_0683 869047 - 870240 + | sigma-70 factor Sde_0684 870285 - 872642 + | DNA primase TERM 937 873023 - 873035 + G 80 -6.2 -4.73388 | opp_overlap 873017, overlap 873020 TTACCAAATGACGCT CGGG GTCGA CCCG TTTTTACTCAGCATT TERM 938 873131 - 873146 + G 70 -4.7 -4.40605 | ATGTAACAGCCGCTT TGGTC GCCGCA GACCA TTTATATTTGTGGGT Sde_0685 872934 - 874301 + | Na+/melibiose symporter and related transporters-like TERM 939 874383 - 874358 - g 71 -3.9 -4.90079 | gap 1 ATGGCAACAATAAAA GATGTCGCACGC GTT GCGGGCGT-ATC CACAGCCACGGTTTC TERM 940 874541 - 874518 - g 85 -3.8 -5.63103 | opp_overlap 874532 TGGTAAGTAAAAAAA GCGATACC CTTGGTGT GGTAACGC CGCGTTTATCGATGA Sde_0686 874343 - 875347 + | LacI family transcription regulator TERM 941 876355 - 876335 - g 79 -11.9 -3.18023 | overlap 876333 876339 TGAGCAGTACCAATA CCAACGCGA TAT TCGCATTGG CGCAGCGGGAGGCTT TERM 942 876700 - 876722 + G 100 -9.2 -5.00616 | opp_overlap 876700 GTCAATCATTAACAA GCGTTTGG CAAACAA CCAAACGC TTTTTTGAAACCAGA TERM 943 876722 - 876700 - g 79 -9.9 -3.77722 | opp_overlap 876700 GTCAATCATTAACAA GCGTTTGGC AAACA ACCAAACGC TTTTTTGAAACCAGA Sde_0687 875475 - 877067 + | peptidase M22, glycoprotease TERM 944 878294 - 878310 + G 77 -9.3 -3.90291 | opp_overlap 878292 GGCCACGCAAAAGGT GCCGCCG GTG CAGCGGC TTTAATTAAAGCGGT TERM 945 878460 - 878485 + G 86 -11.1 -3.73953 | overlap 878455 878466 ACAGCCATTACCCGC GCCGAGCGGGG GTAT CCTCGTTTGGC TTTGGTGGCAGTAAT TERM 946 879634 - 879606 - g 85 -3.9 -5.48063 | gap 1, overlap 879624 ACCCAATACAAAAAA CGGTGTATGCCA ATAAAA CGGCACA-ACCG TATCCAAGCGATGTT TERM 947 879828 - 879808 - g 73 -4 -4.74504 | gap 1, overlap 879811 879812 ATTGCAAGGCAAAAA TCACGTCGC TATC GCGAC-CGA TAAAAAAGCAAATAA TERM 948 880350 - 880329 - g 75 -2.9 -5.26875 | overlap 880330 CCCCTAATCAAAAAA GCGAATGGC TGGC GGCATTCGA AAATATACAAAAACA TERM 949 880391 - 880364 - g 77 -3.5 -5.186 | opp_overlap 880368, overlap 880368 880373 880377 GAAAATATACAAAAA CAAACTAACGA AACTCA TCGTCAGTTTC TGCAAATGAGCGAGC TERM 950 880387 - 880368 - g 76 -4.3 -5.02777 | opp_overlap 880368, overlap 880364 880373 880377 ATATACAAAAACAAA CTAACGA AACTCA TCGTCAG TTTCTGCAAATGAGC TERM 951 881377 - 881367 - g 100 -8.2 -5.24129 | TTGTGGCAGAAAAAA CGGG CTA CCCG GTAGATATGCTAGAG TERM 952 883865 - 883893 + G 73 -10.3 -3.02043 | GCCGATACAGTACTT GCTTGCATACGCG GTT TGCGTATGTACGC TGTTAACGAAAGCTT Sde_0688 877133 - 883915 + | polyketide synthase modules and related proteins-like TERM 953 884434 - 884409 - g 76 -2 -5.36441 | gap 2, overlap 884411 GCGTTACATAAAAAA CTGTTTAATCGG CAAG CCGATT-A-CAG TCAGCGATTTTCTTC TERM 954 884815 - 884828 + G 75 -9.5 -3.54489 | opp_overlap 884813, overlap 884811 GTTTATCGAATGATG GCCGC ACAG GCGGC TTACTTTCGCCTTCG TERM 955 886386 - 886365 - g 95 -3 -5.89947 | GAAATTGAAAAAAAA GCAGAG CAAGAAAACT CTCTGC CGATATTACATAAAG TERM 956 886611 - 886600 - g 77 -7.2 -4.42238 | CCACTGTAAGTAAAA CGCC TGTT GGCG TGACTAACTTGGCAA TERM 957 887355 - 887369 + G 80 -7 -4.63218 | opp_overlap 887355, overlap 887357 887367 ATAGATGAAAGTAGA GGGCGG TTA CCGCGC TTTTATTCAAACGCG TERM 958 887432 - 887419 - g 73 -2.4 -5.252 | TATCGCGACAAAAAA TAGC TCAGGC GCTA ACCCAGCAGGCTGTC TERM 959 887694 - 887668 - g 80 -5.7 -4.92385 | overlap 887663 TAGAGCTAAACAAAA CGCTGCTAGCC GGTTT GGCGCACAGCG GCAGTGCTAAAGTGC TERM 960 887885 - 887863 - g 85 -6.2 -5.10064 | GGCAAGATACAAAAA TGGCACCGGC TCC ACCATTGCCA GACGCAATAACAAGT TERM 961 888444 - 888421 - g 76 -2.4 -5.34381 | overlap 888423 AAAGCCAAATAAAAA TATCAGAGCA AACG CGCTCTAATG CTGCTTCAGCGATAC TERM 962 889408 - 889418 + G 75 -3.2 -5.14965 | AACTCAATGTTAAAC CCGA CCA TTGG TTTTTTGATGGCCAT TERM 963 889449 - 889463 + G 71 -10 -3.27476 | opp_overlap 889446 889445 TTTAAAAATGACCCC TGTGCC CCC GGCACA TTGATGCTTGAGGGT TERM 964 891180 - 891166 - g 74 -5.6 -4.73092 | ACAACCCAAAACAAA CCCTAC ATA GTTGGG GAGTTGCGCACACCG TERM 965 891784 - 891800 + G 86 -5.1 -5.5112 | overlap 891781 891785 TGGGCGAGTTGAGCA GTGAAGC ACA GCTTCAA TTTTTTGTTGCTAAG TERM 966 891785 - 891799 + G 74 -8.6 -3.89587 | overlap 891781 891784 GGGCGAGTTGAGCAG TGAAGC ACA GCTTCA ATTTTTTGTTGCTAA Sde_0689 883923 - 893144 + | polyketide synthase modules and related proteins-like Sde_0690 893144 - 894007 + | dihydroneopterin aldolase Sde_0691 893994 - 894584 + | 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Sde_0692 894577 - 895776 + | hypothetical protein Sde_0693 896658 - 895885 - | triosephosphate isomerase Sde_0694 897802 - 896963 - | hypothetical protein Sde_0695 898814 - 897873 - | hypothetical protein TERM 967 898123 - 898147 + g 100 -12.1 -4.4891 | overlap 898125 AAGCCGGGGGTGCCA TTGCCGGTGGC GTT GCCATCGGCTA TTTTGTGGTAATCGC TERM 968 898125 - 898145 + g 100 -14.7 -3.85254 | overlap 898123 GCCGGGGGTGCCATT GCCGGTGGC GTT GCCATCGGC TATTTTGTGGTAATC TERM 969 898188 - 898200 + g 71 -3.3 -4.79174 | opp_overlap 898179, overlap 898189 AACGTAGCGCAATTT TGCGG GGG CTGCG TTTTCTTCGTTCCAT TERM 970 899012 - 898987 - R 100 -15.5 -5.13741 | gap 1, opp_overlap 898987 898992 GTAAGCCAATAAAAA GGGCGGCGCCTA TGG TAGGC-CCGCCC TTGGGTGCTTAGTTA TERM 971 898987 - 899012 + r 100 -15.5 -3.1485 | gap 1, opp_overlap 898987, overlap 898992 GTAAGCCAATAAAAA GGGCGGCGCCTA TGG TAGGC-CCGCCC TTGGGTGCTTAGTTA Sde_0696 901956 - 899044 - | hypothetical protein TERM 972 902464 - 902478 + G 72 -5.6 -4.45068 | TCGGTGCATATTAGC GTGCCT GCT GGGCGC TTTATTATTAGCGAT Sde_0697 902152 - 903846 + | hypothetical protein TERM 973 903956 - 903994 + T 88 -11.1 -3.8211 | opp_overlap 903961, overlap 903961 TTTTAAAAACCCGTA GGTAAGGTTAGCACCCA AACTC TAGGTGCTAACCTTGGC TTGTTGTACATAGCG TERM 974 903989 - 903961 - T 100 -14.7 -3.07575 | opp_overlap 903961 903956 AAAACCCGTAGGTAA GGTTAGCACCCAA ACT CTAGGTGCTAACC TTGGCTTGTTGTACA TERM 975 903961 - 903989 + T 89 -11.8 -3.31443 | opp_overlap 903961, overlap 903956 AAAACCCGTAGGTAA GGTTAGCACCCA AACTC TAGGTGCTAACC TTGGCTTGTTGTACA Sde_0698 904929 - 903943 - | hypothetical protein TERM 976 904397 - 904434 + g 85 -6.3 -5.16841 | gap 1 GCGTTTATTACTGCC GCGTGGGTTACGCG-AGT AAA ATTGTGTGTGCCCCACGC TTTTTCTTCGTGTGC Sde_0699 904988 - 906502 + | periplasmic protease-like TERM 977 906612 - 906600 - T 71 -4.8 -4.74012 | overlap 906607 906608 AGTACAAAATTAAAA CCAC AAACG GTGG GCTGTGCCCACCCTA TERM 978 906625 - 906607 - T 91 -10.2 -4.2331 | overlap 906600 906608 AATTAAAACCACAAA CGGTGGGC TGT GCCCACCC TACGGATAATCATTT TERM 979 906624 - 906608 - T 100 -13.7 -3.12359 | overlap 906600 906607 ATTAAAACCACAAAC GGTGGGC TGT GCCCACC CTACGGATAATCATT Sde_0700 907680 - 906643 - | hypothetical protein TERM 980 907711 - 907745 + r 71 -8.5 -3.41988 | opp_overlap 907713, overlap 907709 907712 GTAGAAGTATTACAA AATTGGTTGGGCCGC GTGTG GCAGCCCAACCAAAC TGTTATTACCTAAAA TERM 981 907712 - 907744 + r 83 -12 -2.64872 | opp_overlap 907713, overlap 907711 907709 TAGAAGTATTACAAA ATTGGTTGGGCCGC GTGTG GCAGCCCAACCAAA CTGTTATTACCTAAA TERM 982 907743 - 907713 - R 100 -17.7 -4.51699 | opp_overlap 907712 907711 907709 AGAAGTATTACAAAA TTGGTTGGGCCGC GTGTG GCAGCCCAACCAA ACTGTTATTACCTAA Sde_0701 908592 - 907765 - | UDP-glucose 4-epimerase TERM 983 908366 - 908387 + g 72 -3.1 -4.9725 | ACCCTAAAGTGTCGA TTGGTTT CGTTGTAA AAACCAA TTTTTGTATCGCAAT TERM 984 909084 - 909103 + r 100 -11.4 -4.00486 | opp_overlap 909084 GGACCAAAAGAAAAA GCCCGCTG TTTT TAGCGGGC TTATTGTATTATGGC TERM 985 909103 - 909084 - R 100 -10.7 -5.50723 | opp_overlap 909084 GGACCAAAAGAAAAA GCCCGCT GTTTTT AGCGGGC TTATTGTATTATGGC Sde_0702 911151 - 909112 - | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) TERM 986 909910 - 909898 - G 78 -5.5 -4.81863 | overlap 909893 AAACGGATAATAAAA CAGTG TTT CACCG CTGGTTGCATCGGCT TERM 987 911385 - 911350 - R 76 -7.6 -4.17048 | overlap 911353 CGGTGGGCAAAATAA GCATGCAGTTATGCCC GGTA AGGCAAAACTGCATAA GGTATAGCAAGTGGG TERM 988 911382 - 911353 - R 84 -11.5 -3.10579 | overlap 911350 TGGGCAAAATAAGCA TGCAGTTATGCCC GGTA AGGCAAAACTGCA TAAGGTATAGCAAGT TERM 989 911412 - 911429 + r 80 -2.7 -5.50925 | TGGGGGTAAGAGTAA GTTGTGA GGTT TTACAGC TTTTTTGTATTACTT Sde_0703 912466 - 911450 - | SCP/PR1 domain-containing proteins-like TERM 990 912409 - 912420 + g 95 -3 -5.90981 | GTATAAGCGCAGTAG TAAC CAGT GTTA TTTTTTTTGCTATAA TERM 991 914474 - 914486 + G 88 -7.7 -5.07486 | GACTCCGACGGCATT GCACA TGT TGTGC TTTTTATTGACGGTA Sde_0704 913154 - 915181 + | 16S rRNA dimethylase TERM 992 915213 - 915236 + T 100 -12.4 -5.15167 | opp_overlap 915213 GATGAAAAATAAAAA GGCGTTACGG GAAA CCGCAACGCC TTTTTGTTGATGGTA TERM 993 915236 - 915213 - T 100 -14.6 -5.65496 | opp_overlap 915213 GATGAAAAATAAAAA GGCGTTACGG GAAA CCGCAACGCC TTTTTGTTGATGGTA Sde_0705 916160 - 915597 - | pyridoxal phosphate biosynthetic protein PdxA Sde_0706 916647 - 916345 - | hypothetical protein Sde_0707 917141 - 916722 - | hypothetical protein Sde_0708 917604 - 917455 - | hypothetical protein TERM 994 917822 - 917792 - R 74 -9.6 -3.34894 | overlap 917790 AAGTTTGGTTAAAGA TGTGTAGGGTGGGC ACT GCCCACCAGGCACA AGGGAAAAGATGCAT Sde_0709 918999 - 918550 - | hypothetical protein Sde_0710 919634 - 918990 - | hypothetical protein TERM 995 919970 - 919984 + r 82 -8.6 -4.26938 | overlap 919960 919967 919973 ATAGTTTGTTTTTTA GCAGAA CAA TTCTGC TTGTTCTTTTCTCAA Sde_0711 920691 - 920230 - | hypothetical protein TERM 996 921567 - 921549 - R 85 -4.4 -5.55664 | overlap 921550 TTATCATTAAAAAAA CGGTGGGC AGT GCCCATCC TCGTGCACACTATAA TERM 997 921566 - 921550 - R 74 -7.9 -3.92314 | overlap 921549 TATCATTAAAAAAAC GGTGGGC AGT GCCCATC CTCGTGCACACTATA Sde_0712 921960 - 921637 - | hypothetical protein Sde_0713 922165 - 922410 + | ribulose-phosphate 3-epimerase Sde_0714 923795 - 922923 - | anthranilate synthase component I Sde_0715 925216 - 924353 - | nucleotide-binding protein TERM 998 924803 - 924823 + g 72 -4.7 -4.56597 | opp_overlap 924804, overlap 924804 CACTGAGCTTAGATC ACCACTAGA AGT TTTAGTGGC TTTTTGAGAGAAAGA TERM 999 925552 - 925527 - R 100 -13.5 -3.12351 | opp_overlap 925533, overlap 925533 925535 TCTTCCCAGAGTTAA TTCAAATACCC TAAG GGGTATTTGAA CCCTTCGGGCAGCGT TERM 1000 925660 - 925679 + r 100 -9.2 -4.98128 | opp_overlap 925660 ACACGCAAAAAAAAA GGCCACCC CTTC GGGTGACC TTTCTTTTTACTTGT TERM 1001 925679 - 925660 - R 100 -11.4 -6.13 | opp_overlap 925660 ACACGCAAAAAAAAA GGCCACCC CTTC GGGTGACC TTTCTTTTTACTTGT TERM 1002 925934 - 925952 + r 100 -13.1 -3.41195 | opp_overlap 925934, overlap 925929 TACGGGCAATAAAAA GGGCGCC GTTTG GGCGCCC TTGGGTTTTGCTGTT TERM 1003 925952 - 925934 - R 100 -13.1 -5.07486 | opp_overlap 925934 925929 TACGGGCAATAAAAA GGGCGCC GTTTG GGCGCCC TTGGGTTTTGCTGTT Sde_0716 927822 - 925981 - | Fis family transcriptional regulator TERM 1004 926388 - 926402 + g 73 -7.8 -4.17132 | CTAGCTCTTCTGGTG TGGGCT CGC GGCCCA TTTCTTGAAGCATTT TERM 1005 927106 - 927123 + g 76 -4.1 -5.04325 | gap 1, overlap 927090 927099 TGCTTTGCTTTCGAA GCCG-TGC TTG GCAATGGC TTTTTCTACTTTAAG TERM 1006 927566 - 927585 + g 79 -11.4 -3.44848 | overlap 927549 927563 927565 ACCGCCGCCAGTGCT GCGGCAGC TTCT GCTGCTGC TATTTCGTCCGCGGA dnaG 929907 - 927937 - | DNA primase TERM 1007 929625 - 929648 + g 77 -8.8 -3.98661 | gap 1 TTTCTTTGGGTACTT GCAT-GCCCGC AAC GCGGGCGAGGC TTTCTACTGCATCTA TERM 1008 929715 - 929695 - G 100 -9.7 -4.7373 | GTATTCCATTAAAAA GCCAACAGC ATT GCCATTGGC GCCACAGCCAAAGCA Sde_0718 930455 - 930006 - | hypothetical protein rpsU 930827 - 930612 - | 30S ribosomal protein S21 Sde_0720 931225 - 932250 + | O-sialoglycoprotein endopeptidase Sde_0721 932596 - 934518 + | Outer membrane cobalamin receptor protein-like TERM 1009 936375 - 936357 - g 100 -8.8 -5.00884 | opp_overlap 936356 ACCGGTGCTAAAAAA GTGCCCGC CGC ACAGGCAC CGTTAATTTGGTACC TERM 1010 936778 - 936744 - g 72 -9.3 -3.5456 | gap 1, opp_overlap 936743, overlap 936740 AACCCCAATAACCAA GCCGCCGCGGT-TACA GCGG TGCAAACCGAGGCAGC GGCGGGGCATCAGTT TERM 1011 936961 - 936949 - g 70 -4.7 -4.52857 | opp_overlap 936951 936956, overlap 936950 936951 ACTTGGTAGATAAAA TCGCC AAG GGCGG CGGTGGCGTATGGGG Sde_0722 934653 - 937055 + | Crp/FNR family transcriptional regulator TERM 1012 937057 - 937107 + F 80 -3.9 -5.28315 | overlap 937041 937063 937065 TGCTAAGCCGCTAGC G-CTTAGCTGGCCCTGTAGGTGGTG TAG CGCTACC-GCAGGGCCTGTTTTGTC TTTTTTGCCTTTTAT TERM 1013 937063 - 937100 + F 100 -12.7 -5.06052 | gap 1, overlap 937057 937065 GCCGCTAGCGCTTAG CTGGCCCTGTAGGTGGTG TAG CGCTACC-GCAGGGCCTG TTTTGTCTTTTTTGC TERM 1014 937065 - 937098 + F 100 -13.9 -4.11412 | gap 1, overlap 937063 937057 CGCTAGCGCTTAGCT GGCCCTGTAGGTGGTG TAG CGCTACC-GCAGGGCC TGTTTTGTCTTTTTT Sde_0723 937254 - 937607 + | dihydroneopterin aldolase Sde_0724 937609 - 938103 + | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Sde_0725 938217 - 938825 + | hypothetical protein Sde_0726 939661 - 938921 - | pteridine reductase Sde_0727 940947 - 939658 - | peptidase M, neutral zinc metallopeptidases, zinc-binding site TERM 1015 940085 - 940095 + g 90 -6.8 -5.27938 | overlap 940077 GTTTCGTGGCCGTGG TGGC TGG GCCA TTTTTCTTTGGGCGT TERM 1016 940106 - 940116 + g 72 -8.2 -3.67296 | GGCCATTTTTCTTTG GGCG TTA CGCC TTTGCCTAGGTCGTG TERM 1017 941089 - 941112 + H 100 -13.2 -5.04601 | gap 1, overlap 941099 TAATCGAATTTGAGA GGCCGCAGCGT AAA AC-CTGCGGCC TTTTTCGTTTATGGC TERM 1018 941268 - 941283 + G 70 -10.4 -2.51089 | overlap 941267 941264 ACATTAAGCTTTGCG GCAGCG GTGG CGCTGC GTATGTGTTTAGCGT Sde_0728 941175 - 942095 + | hypothetical protein Sde_0729 943500 - 942049 - | deoxyribodipyrimidine photo-lyase type I Sde_0730 943619 - 944059 + | hypothetical protein TERM 1019 944061 - 944082 + T 73 -7.2 -4.15044 | overlap 944062 ATTTGAGGCTTTAGT GGGCGGTG CTTGCA CACCGCCA TTTGTTGAAAGCAAA TERM 1020 944062 - 944081 + T 79 -10.7 -3.08812 | overlap 944061 TTTGAGGCTTTAGTG GGCGGTG CTTGCA CACCGCC ATTTGTTGAAAGCAA Sde_0731 945655 - 944108 - | hypothetical protein Sde_0732 946926 - 945652 - | hypothetical protein TERM 1021 945708 - 945688 - G 70 -9.7 -3.05522 | opp_overlap 945687, overlap 945687 TAAGTCTCTGAAAAC GGGGTAGAT CTC ATCTGCCCC CTCTAGTTGGCGCAT TERM 1022 946244 - 946254 + g 73 -2.4 -5.26119 | TCGAAGGTGTCTAAC CACG GCA CGCG TTTTATTTTTGCGCG TERM 1023 946979 - 946953 - R 88 -10.9 -3.85389 | gap 1, overlap 946958 CTGGAATAACGTAAA CACATCCCCGCA TTGC TGCGGGG-CGTG AGCGACGGTTTAATC TERM 1024 946975 - 946958 - R 88 -12.7 -2.57983 | overlap 946953 ATAACGTAAACACAT CCCCGCA TTGC TGCGGGG CGTGAGCGACGGTTT Sde_0733 948918 - 946996 - | putative serine protein kinase, PrkA TERM 1025 947157 - 947168 + g 86 -3 -5.64274 | GTAGTAAGTCTTCGG TGTT GGAG AACA TTTTTTTCTCGATAA TERM 1026 947417 - 947437 + g 73 -10.5 -3.04263 | opp_overlap 947417 GCATAGGTAACGTAA CGGTCAAAA ATG TTTTGGCCG TATTCCGCATAGGAT TERM 1027 948321 - 948334 + g 84 -8.1 -4.56597 | CGGCAATTTGATCGA GCACC GATG GGTGC TTTTTAACAACGCGG Sde_0734 949241 - 950260 + | UDP-galactose 4-epimerase apaH 951135 - 950320 - | diadenosine tetraphosphatase apaG 951533 - 951162 - | ApaG TERM 1028 951396 - 951424 + g 73 -10.9 -2.65409 | overlap 951395 CACTATGCGCCAGTA GCGGCCAACGAGC TGT GCGGGTTGGTCGC CTTGGTTGGTAATTG Sde_0737 952347 - 951541 - | dimethyladenosine transferase TERM 1029 952014 - 951991 - G 71 -10.4 -2.72043 | gap 1, overlap 951990 AAGCGGGGTGGAAAT GTTGTAGGGCA GGT TGCCC-ACAAC GCGCAGGGGCCGCTC Sde_0738 953358 - 952351 - | 4-hydroxythreonine-4-phosphate dehydrogenase Sde_0739 954661 - 953369 - | L-ribulokinase TERM 1030 953819 - 953829 + g 72 -8.2 -3.74747 | AACTATTTGCTTTTG GCCG CCG CGGC TTTCGTACAACTTAA Sde_0740 957249 - 954667 - | organic solvent tolerance protein, putative TERM 1031 956095 - 956122 + g 76 -8.4 -4.10657 | gap 1 ACTGGCGCTGCCGCC CTGCTGGCTGAGG TGG CCG-AGCCAGCGG TTTTGGCCCGTGTAG TERM 1032 957653 - 957681 + G 72 -8.2 -3.65722 | gap 2, opp_overlap 957649, overlap 957670 AAAATAAATCAGTTA GCTTG-GT-GCCGG TGC CCGGCGACGCAGGC TTTCGCCATTATTTT Sde_0741 957538 - 958608 + | hypothetical protein Sde_0742 958648 - 959340 + | transaldolase AB TERM 1033 959507 - 959493 - f 73 -8.5 -3.5913 | opp_overlap 959490, overlap 959491 TCTAAAGATTAAATA GCGCG GTACT CGCGC AAATGGATTATTCAT Sde_0743 959548 - 960369 + | Sodium:galactoside symporter TERM 1034 960372 - 960396 + T 81 -10.8 -3.30007 | opp_overlap 960374, overlap 960374 GGGCAGCCTGTAGAG TATGGCAGCT TAGCC AGCTGCCATG TTGTAGCCAGATGTT TERM 1035 960374 - 960394 + T 79 -11.2 -3.21593 | opp_overlap 960374, overlap 960372 GCAGCCTGTAGAGTA TGGCAGCT TAGCC AGCTGCCA TGTTGTAGCCAGATG TERM 1036 960394 - 960374 - T 76 -11.2 -2.62616 | opp_overlap 960374 960372 GCAGCCTGTAGAGTA TGGCAGCT TAGCC AGCTGCCA TGTTGTAGCCAGATG Sde_0744 960797 - 960381 - | hypothetical protein TERM 1037 960906 - 960885 - R 79 -10.9 -3.12668 | gap 1, opp_overlap 960885 TAGTCGTAGAGTGAA GGCCGTGCAG TGG CTGCA-GGCC TTGTAGTTAGCCGGT TERM 1038 960885 - 960906 + r 83 -10.9 -3.51032 | gap 1, opp_overlap 960885 TAGTCGTAGAGTGAA GGCCGTGCAG TGG CTGCA-GGCC TTGTAGTTAGCCGGT Sde_0745 961975 - 961010 - | hypothetical protein TERM 1039 961781 - 961810 + g 76 -7.9 -4.2602 | gap 1, opp_overlap 961772, overlap 961799 AACAATGGCATCTTC GCCGAGCTCTT-CT GAG AGCAAGCGTTCGGC TTGTTTGTTGGTGTC Sde_0746 962024 - 962710 + | ribulose-5-phosphate 3-epimerase Sde_0747 962931 - 964412 + | anthranilate synthase, component I TERM 1040 965051 - 965062 + G 70 -2.2 -5.09225 | overlap 965048 965060 965061 GCGTCTTTCCTCTAT GCGT ATGC ATGC TTTTTTGGATGAGCT Sde_0748 964554 - 965282 + | XRE family transcriptional regulator TERM 1041 965319 - 965337 + T 100 -14.6 -5.06016 | opp_overlap 965314 TTAGTTAACACGTTA TGAGGGGC TTG GCCCCTCA TTTTGTTTGTATCAT TERM 1042 965366 - 965388 + T 70 -7.1 -3.76141 | gap 1, overlap 965364 ATCTGCTCTACTTTG TTC-GTGCCA TCCT TGGCACAGAA TGTTTTCATAGTGCT TERM 1043 965448 - 965436 - T 79 -7.7 -4.28656 | opp_overlap 965435 AGCTAACAGCCAAAA CCCAT TTA ATGGG GCTTTTCCGGCTAAC Sde_0749 966836 - 965469 - | response regulator receiver domain-containing protein TERM 1044 966401 - 966413 + g 71 -3.3 -4.77036 | overlap 966395 ATGCTATTACGCCGT CCAGC GGA GCTTG TTTTTGCTCCTGCAA Sde_0750 968903 - 966861 - | signal transduction histidine kinase TERM 1045 967118 - 967140 + g 73 -4 -4.76963 | overlap 967115 967129 TGTCTACATAGCCGT CGCTCGAGGT GGC GTCTTGCGCG TTTTGTATTATGTGG Sde_0751 971457 - 969166 - | hypothetical protein TERM 1046 969487 - 969498 + g 73 -2.2 -5.1963 | CTCGAGTGCCGACAT GTCT TCCC AGGC TTTTTCTTCGTTAGC TERM 1047 969974 - 969993 + g 72 -4.8 -4.62085 | overlap 969975 GTGGTGCGTTTTTCT ACCACGCG TGCA CGCGAGGC TTCTTTTTTAACCAT TERM 1048 970097 - 970121 + g 72 -10.7 -2.8739 | overlap 970096 CCATCAACAATTTTG CGGTAGAGCGG GTC TCGCTCTAGCG GTTTAGATTCGTCTA TERM 1049 971338 - 971359 + g 72 -5.1 -4.63586 | overlap 971331 971341 ATGGTCGAGCAGCTG CACTGCGTT GTCG AGCGCAATG TTTTGTATGTGGTCT Sde_0752 972011 - 972589 + | anthranilate synthase, component II TERM 1050 972736 - 972751 + G 71 -3.9 -4.87291 | CGGTAAGGCAACCGA CGCGC AAAGAG GTGCG TTTTTAGTTGCGCTG TERM 1051 973526 - 973536 + G 72 -8.2 -3.68183 | opp_overlap 973525, overlap 973525 ATAATTGCACTTAAT GCCG GTG CGGC TATTTATGTGTCTGG Sde_0753 972632 - 973657 + | anthranilate phosphoribosyltransferase TERM 1052 974007 - 974023 + G 73 -7.9 -4.06179 | overlap 974003 974000 973999 GCGCGCAGCTACGAG CAGGGCG GTG CGGCCTG TTTGTCGGTTTTAAC Sde_0754 973746 - 974543 + | indole-3-glycerol phosphate synthase Sde_0755 975271 - 974636 - | cAMP-regulatory protein TERM 1053 975847 - 975821 - g 72 -2.8 -5.02074 | GTATTCTTGAAAAAA CACGTCAAAAGG TGT CCGATTGCCGCG TGGAGCTTTCAGCTG Sde_0756 975634 - 976056 + | hypothetical protein TERM 1054 976092 - 976111 + T 100 -10 -5.24129 | gap 1, opp_overlap 976092 976105, overlap 976110 ATCTTTCCCGCTAAA GCCCGCAGT TAA AC-GCGGGC TTTTTTGTGGCCGCG TERM 1055 976111 - 976092 - T 78 -10 -3.53091 | gap 1, opp_overlap 976092 976110, overlap 976105 ATCTTTCCCGCTAAA GCCCGCAGT TAA AC-GCGGGC TTTTTTGTGGCCGCG Sde_0757 976934 - 976128 - | hypothetical protein Sde_0758 977734 - 977084 - | putative ubiquinone biosynthesis protein TERM 1056 978154 - 978173 + G 73 -4.2 -4.77775 | gap 1, opp_overlap 978153 TGGCGCATATCAAGT CGCAC-AGC CGC GCAAGTGCG TTTATTTTGTGCGAT TERM 1057 979385 - 979404 + G 71 -3.4 -4.86621 | overlap 979390 GGCAGAGCTTCGCCA CTGGGCGC AGCA GCGTGCGG TTTTTGCTTAGCGGT Sde_0759 977922 - 979415 + | putative ATPase TERM 1058 979566 - 979518 - T 100 -14.9 -2.86308 | gap 1, opp_overlap 979529, overlap 979529 ATAATAAATAGATTA GCCACA-AAAAAGCCCTGCTAA TGGATG TTAGCAGGGCTTTTTATTCGGC AATTACACCTTTGCA TERM 1059 979529 - 979554 + T 100 -14.1 -5.06816 | opp_overlap 979529 979518 ATTAGCCACAAAAAA GCCCTGCTAAT GGAT GTTAGCAGGGC TTTTTATTCGGCAAT TERM 1060 979554 - 979529 - T 100 -13.4 -5.28778 | opp_overlap 979529, overlap 979518 ATTAGCCACAAAAAA GCCCTGCTAA TGGATG TTAGCAGGGC TTTTTATTCGGCAAT Sde_0760 982303 - 979583 - | aminopeptidase N TERM 1061 979950 - 979966 + g 78 -6.5 -4.56914 | overlap 979943 TTGCCGGGGCGCGCT GCGTTGG CGG CTAGCGC TTTTAGTTTGCCTCG TERM 1062 982168 - 982180 + g 72 -9.1 -3.53444 | overlap 982151 CCAACGCTTGGGTAT GTGGC GCA GCCAC TTTAGCGGGAGCTGG Sde_0761 982746 - 983513 + | putative oxidoreductase TERM 1063 983941 - 983925 - g 70 -9.5 -3.06183 | overlap 983940 TTTACCCCTATTGAA GCTTTAC CTA GTAAAGC CCTTAAGGCGGGCAT Sde_0762 983562 - 984137 + | hypothetical protein TERM 1064 984269 - 984289 + F 75 -8.9 -3.5936 | overlap 984270 984284 CTTTATACGTAATTT TTGCGCCCA GTT TGGGCGCGC TTTACCCGCTTTAGG TERM 1065 984270 - 984288 + F 89 -12.4 -2.75294 | overlap 984269 984284 TTTATACGTAATTTT TGCGCCCA GTT TGGGCGCG CTTTACCCGCTTTAG TERM 1066 985214 - 985231 + G 77 -9.1 -3.99775 | GGCAAGAAGCCGGGT TGGCGTG CGGT CGCGCCA TTATTGTTGATGACT TERM 1067 985629 - 985653 + G 74 -7.1 -4.36914 | opp_overlap 985619 TGTAAGCAGTGTTGC CGCTTTACTCG TAA TGGGCAAAGCG TTTTATGCCGAGCAA Sde_0763 984415 - 985788 + | assimilatory nitrate reductase (NADH) beta subunit TERM 1068 987086 - 987070 - g 74 -3.7 -5.09259 | GATGGCAAAATAAAA GCCAT TTGGATT ATGGC GACTAACCCCGTTGT TERM 1069 987701 - 987678 - g 74 -10.3 -3.2327 | CCAAGTTATTATGAA CACTGGCCG TATTCG CGACCAGTG GCACACCATGACCCG TERM 1070 987832 - 987842 + G 74 -8.2 -3.90922 | opp_overlap 987832 987831, overlap 987831 GCTGTGTTAGAAAAT CGCG GCG CGCG TTATTTAGGCCGCGT Sde_0764 985837 - 988584 + | assimilatory nitrate reductase (NADH) alpha subunit apoprotein TERM 1071 988689 - 988632 - T 76 -11 -2.60211 | gap 1, opp_overlap 988640 988643, overlap 988631 988643 AGGGCGGTAAAAAGC GAGCCTA-GGAATTGCTAAACCATTTA AAGCA TAAATAATTTAGCAATTCTTTCGGCTC GTAAGGACCACTGAG TERM 1072 988640 - 988680 + T 73 -8.6 -3.62096 | opp_overlap 988631 988632 988643, overlap 988643 AAAAAGCGAGCCTAG GAATTGCTAAACCATTTA AAGCA TAAATAATTTAGCAATTC TTTCGGCTCGTAAGG TERM 1073 988743 - 988723 - T 84 -2.5 -5.73978 | ACGAGAAATAAAAAA CTGGATAAG CTA CTTTTACAG CTTAAAAATTTAAAA Sde_0765 989254 - 988745 - | VCBS TERM 1074 988777 - 988790 + g 80 -6.7 -4.74706 | overlap 988768 988766 TTATTGCTTTGTCTA GCAAG GTAT CTTGC TTTTTAACTATTGCA TERM 1075 988971 - 988985 + g 84 -8.6 -4.70887 | overlap 988966 988968 GTGCGCAGCACGCTG TTACCG TAG CGGTAA TTTGTTTCTTGCTCG TERM 1076 990653 - 990631 - g 71 -7.7 -3.92522 | gap 1 GCGCAACCGTAGAAA TGAGCC-CCC ATAT GGGCGGCCCA GCATTCGACGTTATA Sde_0766 989835 - 990782 + | putative LACI-type transcriptional regulator TERM 1077 991703 - 991690 - g 72 -8.1 -3.65827 | overlap 991679 991678 CAAGCCGCAGCCAAA GGCTC GGTG GAGCC ACTAAGTGTGTCGGT Sde_0767 990871 - 992376 + | putative sugar uptake ABC transporter ATP-binding protein Sde_0768 992414 - 993436 + | ABC transporter permease Sde_0769 993440 - 994402 + | inner membrane ABC transporter permease protein YjfF Sde_0770 994448 - 995050 + | putative phosphatase TERM 1078 995170 - 995153 - f 78 -4.1 -5.20333 | opp_overlap 995153 CACCGATAATAAAAA GCGCT AGTGTATA AGCGC GTTCCTGTACTAGGT TERM 1079 995309 - 995321 + G 77 -9.1 -3.98842 | GTTTTGCCGGCAGGG CGCGA CTG TCGCG TTTATGGATATTCTA Sde_0771 995202 - 995972 + | GntR family transcriptional regulator TERM 1080 996063 - 996075 + F 100 -10.5 -5.65927 | TTGCCTTTCTTTTAG CCGCG TTG CGCGG TTTTTTCTTTGGATG TERM 1081 996250 - 996229 - f 70 -3.8 -4.88684 | gap 1, overlap 996233 AATACAAATATAAAA CAT-ACCGA CCCGT TCGGTGATG CAAGGTGATTCTATG Sde_0772 996263 - 997930 + | ribulokinase araD 997927 - 998619 + | L-ribulose-5-phosphate 4-epimerase Sde_0774 998716 - 1000218 + | L-arabinose isomerase TERM 1082 1000474 - 1000495 + G 73 -10.9 -2.64735 | opp_overlap 1000477 AACTAAAAGCGCTAA CCACTGTTG TAGT CGACAGTGG TGATATCAATGCAGT Sde_0775 1000437 - 1001393 + | transaldolase B Sde_0776 1001495 - 1002838 + | Zinc finger-domain-containing protein Sde_0777 1002877 - 1003821 + | ribosomal protein L11 methyltransferase TERM 1083 1003832 - 1003857 + F 93 -13.3 -2.80437 | overlap 1003829 1003827 AGTAGTTGCTTCACT CTGCGCCGCTA ATTC TAGCCGCGCAG TGGTATTGGTATATT TERM 1084 1005973 - 1005956 - g 84 -8.3 -4.60487 | GATGATTTGCAAAAA CGCCAGC AATT GCAGGCG CAGGTAGAAGCAGAA Sde_0778 1003994 - 1006405 + | Acetyl-CoA carboxylase, biotin carboxylase TERM 1085 1006622 - 1006610 - f 91 -7.7 -4.74706 | CCGAATAGTCAAAAA CAGGT CAT ACCTG CGTAACCTTAAGCGA TERM 1086 1008163 - 1008149 - g 80 -10 -3.98214 | AGTACGCATTAGAAA TTGCCG ATG CGGCAA ACAGTGCAAACACCA TERM 1087 1008219 - 1008197 - g 71 -7 -4.15841 | TTATTAAATTAGAAA GCCAATATCG CGC CGATTTTAGC CCGCAAAACAACCCC Sde_0779 1006687 - 1008969 + | Acetyl-CoA biotin carboxyl carrier Sde_0780 1009028 - 1011043 + | dehydroquinase, class II TERM 1088 1011093 - 1011141 + T 88 -9.8 -4.12911 | gap 1, opp_overlap 1011099 1011104, overlap 1011095 1011104 AAAAAAATAATTGAT TACAAATAAAAGCCCGAT-GCGT TTTG ACGTTATCGGGCTTTTTTATGTG TTGTTTATAGGTTTA TERM 1089 1011095 - 1011139 + T 82 -10.2 -3.64369 | gap 1, opp_overlap 1011099 1011104, overlap 1011093 1011104 AAAAATAATTGATTA CAAATAAAAGCCCGAT-GCGT TTTG ACGTTATCGGGCTTTTTTATG TGTTGTTTATAGGTT TERM 1090 1011135 - 1011099 - T 72 -7.4 -3.99806 | gap 1, opp_overlap 1011095 1011093 1011104, overlap 1011104 ATAATTGATTACAAA TAAAAGCCCGAT-GCGT TTTG ACGTTATCGGGCTTTTT TATGTGTTGTTTATA TERM 1091 1011104 - 1011130 + T 100 -9.5 -5.48787 | gap 1, opp_overlap 1011099 1011104, overlap 1011095 1011093 TGATTACAAATAAAA GCCCGAT-GCGT TTTG ACGTTATCGGGC TTTTTTATGTGTTGT TERM 1092 1011130 - 1011104 - T 89 -7.3 -5.02323 | gap 1, opp_overlap 1011104 1011095 1011093, overlap 1011099 TGATTACAAATAAAA GCCCGAT-GCGT TTTG ACGTTATCGGGC TTTTTTATGTGTTGT Sde_0781 1011660 - 1011166 - | XRE family transcriptional regulator Sde_0782 1012801 - 1011827 - | ribosomal large subunit pseudouridine synthase F TERM 1093 1011997 - 1012018 + g 82 -8 -4.68103 | TCGGCTCTTTTTTTA CCTTGGGT TTCGCT ACCCGAGG TTTTGTTGCCGTTGG TERM 1094 1012393 - 1012419 + g 74 -3.7 -4.98061 | overlap 1012400 TAACAATATATTCTT TATCGTGTGCG TTCTC TGCACGCAATA TTTTATTTACTATAT Sde_0783 1013038 - 1013757 + | diguanylate cyclase/phosphodiesterase Sde_0784 1013810 - 1014247 + | hypothetical protein TERM 1095 1014610 - 1014600 - g 76 -8.2 -4.17048 | GTGCTCGCAAAAGAA GCCG TAA CGGC AGGTGCATTAAACCA Sde_0785 1014321 - 1014869 + | hypothetical protein Sde_0786 1015964 - 1014924 - | arabinan endo-1,5-alpha-L-arabinosidase TERM 1096 1015002 - 1015012 + g 75 -2.6 -5.2197 | GTCTTTATCCCAGTT TATT TCT AATA TTTTTAGTTTTTGTA TERM 1097 1015098 - 1015116 + g 70 -2.3 -5.08088 | overlap 1015099 GGTGTAGGCGCTGTT GTGGCCT AAGCC GGGCCAG TTTTTGTTGCCACTT Sde_0787 1016256 - 1017344 + | Alpha-L-arabinofuranosidase Sde_0788 1017392 - 1018465 + | aldose 1-epimerase TERM 1098 1019240 - 1019229 - g 73 -2.2 -5.24129 | GCTTTCCAGAAAAAA CAGC TTAC GCTA TGAGCAAATCTATAG Sde_0789 1018538 - 1019491 + | endo-1,4-beta-xylanase D precursor TERM 1099 1019563 - 1019540 - f 93 -8.9 -4.57482 | gap 1, overlap 1019542 CTAGTTAGAAATAAA GAGCGGTGTC TTTAT GACACCGC-C ATTAAAATGCGCTCG TERM 1100 1019562 - 1019542 - f 100 -12.6 -3.89305 | overlap 1019540 AGTTAGAAATAAAGA GCGGTGTC TTTAT GACACCGC CATTAAAATGCGCTC TERM 1101 1020515 - 1020528 + G 79 -8.1 -4.25256 | GAATACAGCCTTCCA CTCGC CATG GCGAG TTATTTTAGTGGGCG Sde_0790 1019682 - 1021667 + | alpha-glucosidase TERM 1102 1022688 - 1022663 - g 74 -8.3 -3.98804 | gap 1, opp_overlap 1022676 1022686 GGAAATTCGAAAGAA GAGCACGGCTGC GGT GCAA-CGCGCTC TGTGCGCGCACAGAA Sde_0791 1021703 - 1023526 + | Alpha-L-arabinofuranosidase TERM 1103 1023555 - 1023570 + F 71 -2.4 -5.24531 | overlap 1023556 TGTTTACACGCTTAA GCCTCC ACAT GAGGGC TTTTTTATACACCAT TERM 1104 1023642 - 1023619 - f 100 -11 -5.80003 | opp_overlap 1023619 1023618 1023615 TGAACAAACAAAAAA GGCTTGACGA ATTA CCGCCAAGCC CTTCTTTTTCCTGTA TERM 1105 1023816 - 1023804 - g 72 -6.3 -4.19817 | opp_overlap 1023814 TGCATGCACTCAAAA TAGCT TTC AGCTA TATGCCTAAGGCGAT Sde_0792 1023761 - 1023982 + | penicillin-binding protein 1B Sde_0793 1024853 - 1023984 - | hypothetical protein Sde_0794 1026568 - 1025135 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 1106 1025772 - 1025784 + g 81 -4.8 -5.09895 | CAGCTATCAGCAGAG TCGC AGGGG GCGA TTTTTTCAGTGGCTA TERM 1107 1026780 - 1026791 + G 83 -2.2 -5.72254 | gap 1 AGTAATAACACCGGT GC-GC TTT GCTGC TTTTTTGTTCTTTCA Sde_0795 1026757 - 1029138 + | thiamine monophosphate synthase TERM 1108 1029401 - 1029413 + F 73 -5.5 -4.67353 | opp_overlap 1029388, overlap 1029388 AACGGCACTAGCTCG GCAGG CCG CTTGC TTTTTAGGTAAGTAA TERM 1109 1030428 - 1030439 + G 76 -2.2 -5.28176 | CGCACGGTACAAAAG TGGC AGGG GTCA TTTTTTCTCGCTCAG Sde_0796 1029791 - 1030993 + | serine protease Sde_0797 1030993 - 1032258 + | hypothetical protein TERM 1110 1032338 - 1032314 - g 75 -6.7 -4.45083 | opp_overlap 1032320, overlap 1032318 CGTAGATTCAGAAAA TAAATATTTTT CTA AAAAATATCTA ACAGTTAAAAAAGTT TERM 1111 1032334 - 1032318 - g 76 -5.3 -4.7878 | opp_overlap 1032320, overlap 1032314 GATTCAGAAAATAAA TATTTTT CTA AAAAATA TCTAACAGTTAAAAA TERM 1112 1032526 - 1032540 + G 79 -4.2 -5.15117 | GTTTATCGGAGGATT CTGATC GTC GTTCAG TTTTTTCCGCTTTTA TERM 1113 1042067 - 1042087 + G 78 -6.1 -4.58786 | AAAAATGAAGTATTG GAGGCAGCT TAC GGTTGTCTC TTTATTGTTATTAAT Sde_0798 1032288 - 1042712 + | hypothetical protein TERM 1114 1042786 - 1042752 - T 100 -15.2 -3.49951 | opp_overlap 1042756 1042760, overlap 1042760 1042762 TAGATTTTTATATAA CTAACAAAGACAGCTC TAT AAGCTGGCTTTGTTAG TAAGTGAGATGTAAC TERM 1115 1042756 - 1042782 + T 72 -9.5 -3.18582 | opp_overlap 1042752 1042760 1042762, overlap 1042760 TTTTTATATAACTAA CAAAGACAGCT CTATA AGCTGGCTTTG TTAGTAAGTGAGATG Sde_0799 1043703 - 1042885 - | sigma-24 (FecI-like) Sde_0800 1044268 - 1043696 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1116 1044532 - 1044565 + H 86 -3.1 -5.66684 | gap 1 ATTTCGCAGCTTTTA GGTGGTCACCCTTC TATAGGT GCA-GGTGGCCGCC TTTTTTTCTCCCTTC Sde_0801 1044755 - 1046080 + | glycerophosphoryl diester phosphodiesterase family protein TERM 1117 1046107 - 1046138 + T 100 -11.1 -4.77438 | gap 1, opp_overlap 1046106 1046105 CATAAATCGAATAGC TGCTCGCAA-TTAC AGGGA GTAAGTTGCGAGCA TTTTTCCTAATGAAT Sde_0802 1047426 - 1046281 - | AraC family transcriptional regulator TERM 1118 1046742 - 1046731 - G 70 -2.2 -4.93316 | TAACAACAGTAAAAA GACA TAAT TGCC CGTTAGTCCCATAAG TERM 1119 1047622 - 1047599 - R 83 -11.1 -3.47227 | GGTTAATGATGAGAA CGCGCAATA ACAGTG TATTGCGCG TATAGAGTGCAGGGG Sde_0803 1049030 - 1047657 - | HesB/YadR/YfhF TERM 1120 1050023 - 1050034 + G 74 -5.8 -4.64676 | AAACCGTTTTTATAT TCGC ATGC GCGA TTTTATTCGCACTGC TERM 1121 1050110 - 1050087 - g 74 -8.2 -3.98775 | gap 1 ACAAACGTAATTAAA GGCAATC-CCG ATG CGGTAATTGCC GATCACGCAAAAGTG Sde_0804 1049520 - 1050242 + | GntR family transcriptional regulator TERM 1122 1050333 - 1050359 + T 100 -10.9 -5.18726 | gap 1, opp_overlap 1050333 GAAAAAACAAAAAAA GCCCCGCTAGGT TCAT ACC-AGTGGGGC TTTTTATTGTGGGGC TERM 1123 1050359 - 1050333 - T 100 -8.7 -6.28401 | gap 1, opp_overlap 1050333 GAAAAAACAAAAAAA GCCCCGCTAGGT TCAT ACC-AGTGGGGC TTTTTATTGTGGGGC Sde_0805 1051735 - 1050443 - | phosphoribosylamine--glycine ligase TERM 1124 1051312 - 1051323 + g 74 -5.8 -4.68908 | opp_overlap 1051312 CGGCTTTTACAACAA TGGG GGCA CCCA TTTCTTTTAGGTAGG TERM 1125 1051588 - 1051601 + g 75 -6.7 -4.43272 | opp_overlap 1051588 TATCAAATTCTAAAA CATCG ATAG CGATG TTTTCCATTTTAGGT TERM 1126 1051601 - 1051588 - G 72 -6.7 -4.25074 | opp_overlap 1051588 TATCAAATTCTAAAA CATCG ATAG CGATG TTTTCCATTTTAGGT TERM 1127 1051706 - 1051693 - G 70 -9.5 -3.05384 | opp_overlap 1051678 CGGCTTTCCATGCAA GCGCG TGTT CGCGC CCACCACTACCAATA TERM 1128 1051815 - 1051789 - R 100 -15.3 -4.70659 | opp_overlap 1051812 GGCGAGATGTAAAAA CCCGCAAGTAA GTGAA TTACTTGCGGG CTATAGGCCGTAACT Sde_0806 1053410 - 1051830 - | phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase TERM 1129 1053521 - 1053496 - R 79 -8.4 -4.18164 | opp_overlap 1053500, overlap 1053485 1053500 AAGGTGTTAAAACAA CAAAGGGAAC GATTAA GTTCCCTTTA GTGGCTTGGTGGCGA TERM 1130 1053517 - 1053500 - R 79 -7 -4.67697 | opp_overlap 1053500, overlap 1053496 TGTTAAAACAACAAA GGGAAC GATTAA GTTCCC TTTAGTGGCTTGGTG Sde_0807 1053868 - 1053551 - | methyltransferase Sde_0808 1054875 - 1053865 - | cell division protein, FtsL -like TERM 1131 1053979 - 1053995 + g 71 -8 -3.91897 | opp_overlap 1053972 1053971 GTCGAAATTCCCAGC CCCTAG AGAGG CTAGGG TTTGTGCGTACCAAG Sde_0809 1056269 - 1055055 - | hypothetical protein TERM 1132 1055204 - 1055214 + g 72 -5.4 -4.431 | AAATGCGTCGCGCAG CAAC CGG GTTG TTTTGTAAGTCGGTA Sde_0810 1057299 - 1056421 - | 50S ribosomal protein L11P methyltransferase TERM 1133 1057353 - 1057325 - R 95 -9.6 -4.43307 | gap 1, overlap 1057322 CTCTGAATAAAATAA GCCGCAAG-GTGC GTTA GCAGGCTTGCGGC TGGAGCAGAAGCCCG Sde_0811 1058751 - 1057411 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase TERM 1134 1058120 - 1058134 + g 73 -7.8 -4.15543 | opp_overlap 1058112, overlap 1058121 GACATTACCTGAACT TCCACG TGA CGTGGG TTTTGCAGGTATTTC TERM 1135 1058353 - 1058376 + g 75 -3.1 -5.18357 | gap 1 CAGGGCGCCCCCAGA GCCGG-GTAC AGTTG GTACGCCTGC TTTTTTCATGGCTTC Sde_0812 1059227 - 1058772 - | biotin carboxyl carrier protein Sde_0813 1059726 - 1059286 - | 3-dehydroquinate dehydratase TERM 1136 1059881 - 1059902 + r 80 -8.7 -4.07562 | overlap 1059882 ATGGCTATGTCTATG ACCCGCTAA CAAT TTAGCGGGA TTTCTCTGCAGTTTG TERM 1137 1059882 - 1059901 + r 86 -12.2 -3.03814 | overlap 1059881 TGGCTATGTCTATGA CCCGCTAA CAAT TTAGCGGG ATTTCTCTGCAGTTT Sde_0814 1061728 - 1059935 - | C-type cytochrome biogenesis protein TERM 1138 1060049 - 1060037 - G 72 -9.1 -3.5032 | overlap 1060035 1060040 GGGGTACATTAAATA CAGCG GTA CGCTG TTGCGACCAAACTGC TERM 1139 1060713 - 1060689 - G 72 -8.5 -3.76641 | ATGGCAATACCTAAA GCTGTGGCCAT AAA AGGGCCAGAGC ATGGGCTTGCTACAA Sde_0815 1061972 - 1062730 + | N-acetylglucosaminyltransferase, MurG TERM 1140 1063802 - 1063821 + G 78 -5.6 -4.85267 | gap 1, overlap 1063803 1063818 CCCAGCAGTATTTTG GCGC-GCCG CAC CGGCTGCGA TTTTTGCTGGTTTGT TERM 1141 1063803 - 1063820 + G 72 -9.1 -3.49533 | gap 1, overlap 1063802 1063818 CCAGCAGTATTTTGG CGC-GCCG CAC CGGCTGCG ATTTTTGCTGGTTTG Sde_0816 1062863 - 1064791 + | diguanylate cyclase/phosphodiesterase TERM 1142 1065152 - 1065163 + G 72 -5.8 -4.38116 | GAACCCGGCGGCTAC CACC TAAT GGTG TTTGATTTTTATGAA Sde_0817 1064834 - 1065271 + | D-alanine--D-alanine ligase Sde_0818 1065280 - 1066353 + | hypothetical protein TERM 1143 1066418 - 1066382 - T 93 -12.4 -3.08314 | opp_overlap 1066387, overlap 1066387 CGCAAGCGTTAAAAT TAAAAGCCCCTGTTAG TTAAG CTATCAGGGGCTTTTT TATGAGGCCTAAAGT TERM 1144 1066413 - 1066387 - T 100 -12.3 -4.67038 | opp_overlap 1066387, overlap 1066382 GCGTTAAAATTAAAA GCCCCTGTTAG TTAAG CTATCAGGGGC TTTTTTATGAGGCCT TERM 1145 1066387 - 1066413 + T 100 -13 -5.24531 | opp_overlap 1066382 1066387 GCGTTAAAATTAAAA GCCCCTGTTAGT TAA GCTATCAGGGGC TTTTTTATGAGGCCT Sde_0819 1067439 - 1066453 - | cell division protein FtsA TERM 1146 1069331 - 1069318 - g 74 -8.1 -3.94051 | opp_overlap 1069326 AAAGTAAACGAAGAA GTGCG TTCG CGCAC AGAAGGTAAAGAGCT TERM 1147 1069667 - 1069647 - g 82 -6.8 -4.85129 | gap 1 ACTACAGAGTAAAAA GGC-CGAGC CTGC GCCCGCGCC AATGCGCGATAAGCT Sde_0820 1067758 - 1070052 + | cell division protein FtsZ Sde_0821 1070042 - 1070392 + | UDP-3-0-acyl N-acetylglucosamine deacetylase Sde_0822 1070683 - 1071840 + | Alpha-L-arabinofuranosidase Sde_0823 1072004 - 1072603 + | sigma-24 (FecI-like) TERM 1148 1073186 - 1073163 - g 83 -6.6 -4.97312 | overlap 1073164 AAAACTAAGTAAAAA GCCTGCCGCT AGCC AGAGGCAGGT GAGCGCTATTCGCGC TERM 1149 1073185 - 1073164 - g 75 -10.1 -3.55947 | overlap 1073163 AAACTAAGTAAAAAG CCTGCCGCT AGCC AGAGGCAGG TGAGCGCTATTCGCG Sde_0824 1072600 - 1074726 + | arginine biosynthesis bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase TERM 1150 1074781 - 1074748 - f 100 -16.9 -3.97947 | opp_overlap 1074754 CCCATTGACGATAAA CCTAAACGCCCGA GTATCGTT TCGGGCGTTTAGG CCAGCAAGCCACCCT TERM 1151 1074754 - 1074775 + F 76 -9.4 -3.53012 | opp_overlap 1074748 GACGATAAACCTAAA CGCCCGAG TATCGT TTCGGGCG TTTAGGCCAGCAAGC TERM 1152 1075882 - 1075893 + G 70 -2.2 -4.99043 | overlap 1075878 ATTCACGGCTTTGGT TTGG CGAG CCAG TTTTATTTCTCGCGC TERM 1153 1076182 - 1076170 - g 71 -6.9 -4.18018 | GTGCGTCAGTTAAAA CGCGA TTA CCGCG AAACCGATTTGCAAT TERM 1154 1076257 - 1076245 - g 78 -5.5 -4.77036 | CCTTACGAGCAAAAA GTCGC CGA GCAAC AATTAACGAAGAATT TERM 1155 1076305 - 1076290 - g 78 -5.4 -4.88736 | gap 1 CAGCAGCTAGAAAAA GCGCGCA GCT TGC-CGC ATAGCCATTTGCAGG TERM 1156 1076430 - 1076452 + G 75 -6.2 -4.41348 | opp_overlap 1076430 1076429, overlap 1076423 TGCGTCCCGTCAAAT TGGCTCGCTT ATA AAGCCCGCCA TTTATTTAACCGCAC Sde_0825 1075024 - 1077357 + | Mutator MutT Sde_0826 1077357 - 1077722 + | hypothetical protein TERM 1157 1077752 - 1077774 + T 100 -7.6 -5.37593 | opp_overlap 1077752 GGGAGCATATAAAAA GGGGCGCAGA TTA TATGGGCCCC TTTTTTAGTTTACAG TERM 1158 1077774 - 1077752 - T 95 -7.6 -5.00895 | opp_overlap 1077752 GGGAGCATATAAAAA GGGGCGCAGA TTA TATGGGCCCC TTTTTTAGTTTACAG Sde_0827 1079089 - 1077818 - | glutamate-1-semialdehyde 2,1-aminomutase Sde_0828 1079794 - 1079141 - | thiamine-phosphate diphosphorylase Sde_0829 1080645 - 1079794 - | putative phosphomethylpyrimidine kinase TERM 1159 1080148 - 1080120 - G 72 -3.2 -5.06414 | gap 1, overlap 1080121 TGCCGCTAATAAAAA CTTCACCGGCTGC ATCG GCAGC-GATAAAA GCGTGAGCGGCGGCA TERM 1160 1080613 - 1080601 - G 75 -6.3 -4.4009 | GTCTAGGGTAGAAAA CGTAA GTA TTACG GGCGGATTGGCGCTA TERM 1161 1081193 - 1081211 + G 73 -8 -4.14511 | TGGGCGCTGCGGACG CCGAGCGC GAT GTGCGCGG TTTTGCGGTAAAGTT Sde_0830 1080880 - 1082322 + | catalase TERM 1162 1082390 - 1082374 - T 100 -12.3 -4.99947 | opp_overlap 1082371 1082370 1082374 TCTAAGTAAACAAAA GGGTGCA ATT TGCACCC TCAGTTTATTGATAA TERM 1163 1082374 - 1082390 + T 89 -12.3 -2.77283 | opp_overlap 1082374, overlap 1082371 1082370 TCTAAGTAAACAAAA GGGTGCA ATT TGCACCC TCAGTTTATTGATAA TERM 1164 1082640 - 1082656 + T 89 -6.5 -5.33866 | overlap 1082630 TTGTCATCACTCTGA GGGTGAA ATT TGCACCC TTTTTTATGCCTTTA Sde_0831 1083094 - 1082669 - | hypothetical protein Sde_0832 1084851 - 1083094 - | chloride channel TERM 1165 1083807 - 1083797 - G 91 -6.8 -5.52986 | ACCGCATCAAAAAAA GTGC CCA GCAC CCCGCCCAAGCAAGC TERM 1166 1084055 - 1084075 + g 77 -8.9 -3.91402 | GCAACAGGGTATTTA CTTAGGCGC ATA GCGCCAAGG TTTAGCTTTATGTAG TERM 1167 1084352 - 1084334 - G 77 -11.6 -2.89935 | overlap 1084324 AAAGAGGCGGATATA CCGGCGGC AAC GCCGCAGG CAATGAGGGTAAGCA TERM 1168 1084375 - 1084402 + g 71 -9.9 -3.18264 | GGTAAGCAGGCTGTT GTTGGGCAGGT TTAGCC ACTTGCCCAGC TTGCTGGCTACGCCG TERM 1169 1084454 - 1084431 - G 83 -13.1 -3.19192 | CGGCACCCAAGTGAA CGGCGGGCC CTTCGC GGCCCACCG ATTGCCCGCTTAACA Sde_0833 1085136 - 1086176 + | N-acetyl-gamma-glutamyl-phosphate reductase Sde_0834 1086256 - 1086996 + | hypothetical protein TERM 1170 1087036 - 1087022 - g 70 -2.1 -5.04249 | overlap 1087032 GGTGGAAAAAATAAA GACAA TCAAT TTGCC ACTGGTGGCACCACA Sde_0835 1087001 - 1087450 + | hypothetical protein TERM 1171 1087820 - 1087842 + G 76 -12 -2.62038 | overlap 1087819 AGTAGCCAACCCCAA CGCCTCCACA ACC TGTGGATGCG GTTCGTCATTTTCCA Sde_0836 1087509 - 1087862 + | hypothetical protein Sde_0837 1087865 - 1088431 + | hypothetical protein TERM 1172 1088781 - 1088763 - g 78 -5.2 -5.0538 | opp_overlap 1088776 1088777, overlap 1088749 1088765 1088768 TTGCATTTGAAAAAA TACAGCGC GGA ACGCCGCA AAATGGTTTTGTGGA TERM 1173 1088776 - 1088796 + G 78 -4.7 -4.96848 | opp_overlap 1088765 1088763 1088768, overlap 1088777 AATACAGCGCGGAAC GCCGCAAAA TGG TTTTGTGGA TTTTTATATGGACGA TERM 1174 1089079 - 1089110 + G 76 -5.3 -4.90906 | overlap 1089109 AAAAGGGGATGCAAG TAGGTTTGCCA AAAAAATAAA TGGCAAATCTA TTTTTAATATTCTGG TERM 1175 1090590 - 1090576 - g 73 -4.2 -4.7657 | opp_overlap 1090577, overlap 1090577 TAAAAACGCTAAAAA TGCTTG GCT CAAGCT TTATCTTCGTCCCTA TERM 1176 1090577 - 1090589 + G 76 -7.7 -4.24075 | opp_overlap 1090576 1090577 AAAAACGCTAAAAAT GCTTG GCT CAAGC TTTATCTTCGTCCCT Sde_0838 1088561 - 1090606 + | hypothetical protein Sde_0839 1091364 - 1091807 + | MraZ protein Sde_0840 1091819 - 1092757 + | S-adenosyl-methyltransferase MraW Sde_0841 1092838 - 1093155 + | nicotinate-nucleotide pyrophosphorylase TERM 1177 1093190 - 1093227 + G 71 -7.7 -3.94 | gap 1, overlap 1093195 TAAATGGCGAATGAT GT-TAATGGGTGGGGCGC TTT GCGCTCTGCCCATTTCGC TTATTTGGCACTTGG TERM 1178 1093195 - 1093221 + G 100 -14.4 -3.89435 | overlap 1093190 GGCGAATGATGTTAA TGGGTGGGGCGC TTT GCGCTCTGCCCA TTTCGCTTATTTGGC Sde_0842 1093152 - 1094858 + | peptidoglycan synthetase FtsI Sde_0843 1094855 - 1096411 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1179 1097151 - 1097129 - g 83 -4.2 -5.44119 | TGCAGGGCAAAAAAA TAACTCGA TTTAATC CCGAGTTA ACAGATGAAGCCGCC TERM 1180 1097568 - 1097552 - g 95 -12.3 -4.24342 | CGGCGCATGAAGAAA TTGGGCG TTA CGCCCAA CAAAAACAAATTAAA Sde_0844 1096411 - 1097787 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 1181 1098007 - 1098021 + G 73 -4.2 -4.88918 | overlap 1098002 GCGGTACCCCTACAA TGGGCG GCA CGCTTA TTTTATTTGCCATAG Sde_0845 1097787 - 1098869 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Sde_0846 1098911 - 1100281 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 1182 1100427 - 1100439 + G 81 -3.3 -5.28176 | TGCTGCCGAGCGCTA CCACG ACA CTTGG TTTTTTGTGCGTAAG TERM 1183 1100749 - 1100767 + G 74 -8.2 -3.89291 | opp_overlap 1100753 TCTGGGTTTTTGAAG TTAACGGC AGT GCTGTTAA TTATTGTGCTGTTGC Sde_0847 1100278 - 1101441 + | cell division protein FtsW TERM 1184 1101525 - 1101515 - g 80 -6.8 -4.66163 | AGCGCGAGCGAAAAA CGCA CGG TGCG AAAAGTTGTAGCGCG TERM 1185 1102624 - 1102607 - g 78 -5.5 -4.83615 | overlap 1102608 CATGCGGCAGAAAAA TTCGCAG ACTT CTGCGAG GAATTGATACATGAC TERM 1186 1102623 - 1102608 - g 72 -9 -3.49687 | overlap 1102607 ATGCGGCAGAAAAAT TCGCAG ACTT CTGCGA GGAATTGATACATGA Sde_0848 1101473 - 1102642 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1187 1103637 - 1103655 + G 77 -10.2 -3.39595 | GAATTTGAAGTGGGT GCAGGGCC AAC GGCCATGC TTGTGGATGATTACG TERM 1188 1103766 - 1103779 + G 74 -8.1 -3.8709 | opp_overlap 1103765 CAACCGCACAGATAT TCGCG CACA CGCGA TTTGTACGAAGATTT Sde_0849 1102635 - 1104059 + | UDP-N-acetylmuramate--L-alanine ligase TERM 1189 1104432 - 1104419 - g 78 -5.3 -5.04601 | TGGACAAATTAAAAA CCAAA CAGG TTTGG CAAAGTGTCGGTTTG TERM 1190 1104811 - 1104799 - g 76 -7.7 -4.31164 | overlap 1104761 CTTACACAAGAGAAA GAAGC GGA GCTTC AATCTATCGCTCAGC Sde_0850 1104079 - 1105023 + | D-alanine--D-alanine ligase TERM 1191 1105425 - 1105386 - g 81 -3.5 -5.41941 | gap 1 GAAATCAAACAAAAA GTTGAAGCCGACCCATGG GTGTA CGACGTG-CGGCTGCAAC GGGTGTGGCCAGATG Sde_0851 1105032 - 1105889 + | chaperonin Cpn60/TCP-1 Sde_0852 1105921 - 1107150 + | cell division protein FtsA TERM 1192 1107173 - 1107196 + F 80 -10.3 -3.52204 | opp_overlap 1107168, overlap 1107168 TTAATAGATATCATG CGGCAGGGT AGACCC ACCCTGCTG TTGATTTAACACTCG TERM 1193 1107679 - 1107667 - g 77 -3.4 -5.15969 | TTTGAAGGTAAAAAA CGAT TGGCT ATCG CAGAAGAAGGTATTA Sde_0853 1107241 - 1108413 + | cell division protein FtsZ lpxC 1108779 - 1109690 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 1194 1109729 - 1109714 - f 73 -6 -4.56775 | opp_overlap 1109715, overlap 1109715 AGGCTTGTTGAAAAA GGCGCC ATTT GGCGCT TTTTTACGTTTTATA TERM 1195 1109728 - 1109715 - f 74 -9.5 -3.33744 | opp_overlap 1109715, overlap 1109714 GGCTTGTTGAAAAAG GCGCC ATTT GGCGC TTTTTTACGTTTTAT TERM 1196 1109715 - 1109728 + F 100 -9.5 -5.28315 | opp_overlap 1109715 1109714 GGCTTGTTGAAAAAG GCGCC ATTT GGCGC TTTTTTACGTTTTAT Sde_0855 1110048 - 1110980 + | Fe-S type hydro-lyases tartrate/fumarate alpha region TERM 1197 1111264 - 1111249 - g 72 -3.2 -5.0538 | GCTGAGTTTAAAAAA CGACAT CAAG ATGGCG AAAGCTTAAATGCGC TERM 1198 1112521 - 1112508 - g 74 -3.7 -5.02074 | TGAGCGTTTAAAAAA GGCGG ATAT CCCCC ACGAAGTACTTAACG TERM 1199 1112826 - 1112840 + G 73 -7.8 -4.10179 | overlap 1112821 1112827 CGGTCGTGCAGGGCG TCAGGG CGA CCCTGG TTTGTCTCGCTTCTA Sde_0856 1111093 - 1113846 + | preprotein translocase subunit SecA TERM 1200 1114022 - 1114032 + G 74 -6.8 -4.36914 | TAGCTGGGGTTTTTA CGCA AAA TGCG TTTTGTGCCGAGCCG TERM 1201 1114075 - 1114055 - g 74 -5.5 -4.58395 | CCGAGCCGGTAAAAA TTGCCAA GCAGCAT TTGGCAA AACAAAATGTACGCT argJ 1113874 - 1115094 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Sde_0858 1115111 - 1116064 + | hypothetical protein Sde_0859 1116273 - 1116061 - | diguanylate cyclase/phosphodiesterase Sde_0860 1116889 - 1116278 - | phosphoribosylglycinamide formyltransferase Sde_0861 1117785 - 1116889 - | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A Sde_0862 1119005 - 1117788 - | type IV pilus biogenesis protein PilC Sde_0863 1120730 - 1119009 - | type 4 fimbrial biogenesis protein PilB TERM 1202 1120561 - 1120588 + g 83 -6.2 -5.00884 | TCTTCCGAGGCTGCT GTGGCTATAGTG AGGG CGCTAATGCCAC TTTTTTGAGAAAGGT Sde_0864 1121089 - 1121508 + | peptidase S49, protease IV TERM 1203 1121528 - 1121557 + F 100 -17.3 -4.41609 | opp_overlap 1121528 TCTTTGGTGTCATAA GGGGGTATATGGC TTAA GCTATATACCCCC TTTCTATTTGTGGTC TERM 1204 1121557 - 1121528 - f 100 -15.1 -3.28712 | opp_overlap 1121528 TCTTTGGTGTCATAA GGGGGTATATGGC TTAA GCTATATACCCCC TTTCTATTTGTGGTC TERM 1205 1121773 - 1121793 + F 74 -7.6 -4.00683 | opp_overlap 1121772, overlap 1121774 CTTTTCTATAGATAC TTCAACGG GTAGG CCGTTGAG TTTGCTTACGTTTTT TERM 1206 1122494 - 1122508 + G 74 -5.6 -4.56887 | overlap 1122487 1122485 1122495 TTTGAACCGTCCAGC GGGCTG TTT CAGCCA TTTTCTACCTTTTTA TERM 1207 1122495 - 1122507 + G 70 -9.1 -3.32505 | overlap 1122487 1122485 1122494 TTGAACCGTCCAGCG GGCTG TTT CAGCC ATTTTCTACCTTTTT Sde_0865 1122053 - 1123504 + | hypothetical protein Sde_0866 1124188 - 1123481 - | hypothetical protein Sde_0867 1124870 - 1124331 - | arsenate reductase TERM 1208 1124520 - 1124537 + g 80 -9.9 -3.87318 | GTTGCCTATTTCTAT TGGGTTG GCGC CAACCCA TTTACTGTAGTCATT Sde_0868 1125865 - 1124909 - | ribonuclease BN TERM 1209 1125338 - 1125350 + g 85 -3.3 -5.48514 | overlap 1125329 CTCATCCCATTGAAT GGTCT TGA GGGCC TTTTTGTTTATTGCT Sde_0869 1127003 - 1125882 - | response regulator receiver domain-containing protein TERM 1210 1126723 - 1126709 - G 88 -7.8 -5.02074 | overlap 1126711 CTATGTCGCAAAAAA CAGGCG TGG CGCCTA GTAATGCTATTGGTT TERM 1211 1126721 - 1126711 - G 76 -8.2 -4.13963 | overlap 1126709 ATGTCGCAAAAAACA GGCG TGG CGCC TAGTAATGCTATTGG Sde_0870 1127714 - 1127016 - | hypothetical protein Sde_0871 1128379 - 1127810 - | carbohydrate kinase, thermoresistant glucokinase Sde_0872 1129332 - 1128376 - | regulatory protein, LacI Sde_0873 1131195 - 1129453 - | hypothetical protein TERM 1212 1129854 - 1129843 - G 72 -5.8 -4.40804 | TAGTAGTGCAGAAAA CCTG CGTT CAGG AACAGATTCGATCAG Sde_0874 1132137 - 1131250 - | carboxylating nicotinate-nucleotide pyrophosphorylase TERM 1213 1131616 - 1131644 + g 73 -9.5 -3.39892 | overlap 1131617 1131636 CATATCGTAAAGGCC TATGCGGTGGTTG TGG CAGCCGCCGCAGG TTATGGCGTATTTTT TERM 1214 1131617 - 1131643 + g 71 -10.8 -2.62851 | overlap 1131616 1131636 ATATCGTAAAGGCCT ATGCGGTGGTTG TGG CAGCCGCCGCAG GTTATGGCGTATTTT TERM 1215 1133364 - 1133376 + G 76 -9.1 -3.71873 | TGCTCAATGTATTGT CGCTG GCG CAGCG TTTGCCTATGCCTGC TERM 1216 1134709 - 1134693 - g 72 -3 -5.01732 | gap 1, overlap 1134695 AAGTGGCCGAAAAAA CG-CAAC AAGA GTTGGCG TTGGCGCTTAAGAAA TERM 1217 1134740 - 1134727 - g 70 -2.3 -5.06414 | opp_overlap 1134728 1134738, overlap 1134728 GGCGCTTAAGAAAAA CCGCT TGCG AGCGT TGGATAACAGCGTGC Sde_0875 1132283 - 1134811 + | hypothetical protein TERM 1218 1134850 - 1134877 + F 79 -7.7 -4.24342 | opp_overlap 1134854, overlap 1134851 1134854 CGCTAATTGTCTTAG TTAAGGGGCCT TTAAAT AGGCCCCTCAG TTTATTGATAAACCC TERM 1219 1134873 - 1134854 - f 79 -10.7 -3.05715 | opp_overlap 1134851 1134850 1134854 AATTGTCTTAGTTAA GGGGCCT TTAAAT AGGCCCC TCAGTTTATTGATAA TERM 1220 1134854 - 1134873 + F 77 -10.7 -2.77283 | opp_overlap 1134854, overlap 1134851 1134850 AATTGTCTTAGTTAA GGGGCCT TTAAAT AGGCCCC TCAGTTTATTGATAA TERM 1221 1134984 - 1135009 + F 100 -11.3 -4.93696 | opp_overlap 1134983 1134982 TATGTCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTTCAC TERM 1222 1135076 - 1135095 + F 93 -10.7 -4.08317 | overlap 1135070 TTGTCATCAGCCTGA GGGGCCT TTAAAT AGGCCCC TTTAATTTCAGATTG Sde_0876 1135167 - 1135766 + | N-acetyl-anhydromuranmyl-L-alanine amidase Sde_0877 1135769 - 1136614 + | signaling modulator of AmpD, AmpE TERM 1223 1137604 - 1137594 - g 73 -2.4 -5.09426 | TCCAATGTTAAAAAA CTGG ATA CCGG TGGATAGCGGTGCAG Sde_0878 1136986 - 1137735 + | histone-like DNA-binding protein Sde_0879 1139350 - 1137764 - | hypothetical protein TERM 1224 1138365 - 1138354 - G 79 -4.4 -5.17786 | GAATAAAACTAAAAA TAGC GCAG GCTA CTTGCAGCCCGTTGC TERM 1225 1138595 - 1138571 - G 78 -12.1 -3.07344 | GGAGTCCGTAATAGA GGCTGGCAGGC CTG GGCTACCAGCC ACTGTCCAAGCTATG Sde_0880 1139674 - 1139381 - | aspartyl-tRNA synthetase Sde_0881 1139763 - 1140833 + | alanine racemase region Sde_0882 1140945 - 1141421 + | biotin--acetyl-CoA-carboxylase ligase Sde_0883 1141596 - 1141886 + | Bvg accessory factor TERM 1226 1142948 - 1142926 - g 76 -4 -4.95484 | overlap 1142928 CATGACCAAAGAAAA CAGCACTATC GTT GATGGCGCAG GCGTTGCTGCAGATA Sde_0884 1141943 - 1143586 + | chaperonin, 60 kDa TERM 1227 1143649 - 1143631 - f 100 -14.6 -4.67353 | opp_overlap 1143631 TTAGTTAGTTAAAAA GAGCGGCT ATT AGCCGCTC TTTTTTTTGTGTTTT TERM 1228 1143631 - 1143649 + F 100 -14.6 -6.18768 | opp_overlap 1143631 TTAGTTAGTTAAAAA GAGCGGCT ATT AGCCGCTC TTTTTTTTGTGTTTT TERM 1229 1144070 - 1144086 + G 72 -5.1 -4.62203 | overlap 1144073 ACTGGCGCAGTTGGT GAAGCAA TTG TTGCTGC TTTTGGTTCTTTCGA Sde_0885 1143788 - 1144369 + | SecE subunit of protein translocation complex TERM 1230 1144432 - 1144407 - f 82 -6.8 -4.87786 | gap 1, opp_overlap 1144407 TCAACGGCACAAAAA CCCGCCTTTGC CCTGT GCAT-GGCGGG TTTTTTTATGGCTAT TERM 1231 1144407 - 1144432 + F 100 -6.8 -5.65177 | gap 1, opp_overlap 1144407 TCAACGGCACAAAAA CCCGCCTTTGC CCTGT GCAT-GGCGGG TTTTTTTATGGCTAT Sde_0886 1144561 - 1145199 + | transcription antitermination protein NusG Sde_0887 1145214 - 1145960 + | ribosomal protein L11 TERM 1232 1145978 - 1145998 + F 100 -16.9 -2.90075 | overlap 1145996 GCCCGTTAGTTCTAC CCCGCCCTA TAA TAGGGCGGG TATCCTTCGAACACC TERM 1233 1146505 - 1146484 - g 72 -5 -4.56597 | CGGTGCGCGTAAAAA CACCGGCG ACAACA CGCCTGCG GTAATCCACTACAAA TERM 1234 1147347 - 1147335 - g 74 -3.3 -5.00616 | CCGTGTTGGAAAAAA CCGGT CTT ATCGG CATGGTGGGTAAAGC Sde_0888 1146113 - 1147633 + | fumarase TERM 1235 1147652 - 1147673 + F 100 -12.3 -4.26188 | opp_overlap 1147652 1147651 TCTAATTCCACGAAT GCGGCTTGA TTGG TCAGGCCGC TTTTCCCTCTCTGGC TERM 1236 1147673 - 1147652 - f 70 -10.1 -2.50994 | opp_overlap 1147652, overlap 1147651 TCTAATTCCACGAAT GCGGCTTGA TTGG TCAGGCCGC TTTTCCCTCTCTGGC TERM 1237 1149292 - 1149304 + G 71 -3.4 -4.83615 | CAGCAACCTGACATG GGTT TTGAT AACC TTTTTATCGAAGATA TERM 1238 1149841 - 1149860 + G 72 -9.3 -3.49226 | opp_overlap 1149831 1149840 1149839, overlap 1149840 AGAAACGAAGATAGT TCGTCGG CGACTT CCGACGA TATTGTTGTGCCGTT Sde_0889 1148014 - 1150992 + | Outer membrane receptor for ferrienterochelin and colicins-like Sde_0890 1151069 - 1153243 + | ribosomal protein L7/L12 TERM 1239 1153293 - 1153317 + F 100 -17.2 -6.11243 | opp_overlap 1153293 GGTCAATATCAGAAA GCCCCGAGGA CACAA TCCTCGGGGC TTTTTTTTGTTCCGT TERM 1240 1153317 - 1153293 - f 100 -17.9 -4.06384 | opp_overlap 1153293 GGTCAATATCAGAAA GCCCCGAGGAC ACA ATCCTCGGGGC TTTTTTTTGTTCCGT Sde_0891 1153431 - 1153772 + | pterin-4-alpha-carbinolamine dehydratase TERM 1241 1154198 - 1154232 + G 73 -10.1 -3.4252 | gap 1, opp_overlap 1154198 GCACTCGTGGCTAAA CCG-AGCCGCAACG CACAATAA CGTTGTGGCTGCGG TTGTAGTGAATAGGC Sde_0892 1153983 - 1156064 + | diguanylate cyclase/phosphodiesterase Sde_0893 1156780 - 1156121 - | phosphoribosylglycinamide formyltransferase Sde_0894 1157926 - 1156817 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1242 1158026 - 1158047 + H 75 -2.3 -5.24989 | overlap 1158022 1158027 TCGGCCATTTACCTG TGGTTAGGT TTAC ATTTAACCG TTTTTTGATGTGTAA TERM 1243 1158643 - 1158621 - g 86 -11.3 -3.72363 | gap 1, opp_overlap 1158633, overlap 1158633 TATTCAAAGCTTAAA CGCCAGCGCA AAGC TGCGC-GGCG CGCCGCTTATCTACC TERM 1244 1158633 - 1158649 + G 72 -9.3 -3.48924 | opp_overlap 1158621 1158633 AAACGCCAGCGCAAA GCTGCGC GGC GCGCCGC TTATCTACCCGCTAC TERM 1245 1158649 - 1158633 - g 72 -9.3 -3.61371 | opp_overlap 1158633, overlap 1158621 AAACGCCAGCGCAAA GCTGCGC GGC GCGCCGC TTATCTACCCGCTAC TERM 1246 1158829 - 1158844 + G 71 -6.8 -4.18018 | gap 1, opp_overlap 1158824 TGGCAAATAGCCCAC CGCGGCG AGT CGC-GCG TTTTCGATAGCCGCA Sde_0895 1158055 - 1159263 + | translation elongation factor G TERM 1247 1159248 - 1159273 + F 84 -11.3 -3.12668 | gap 1, opp_overlap 1159245 TCCATTAGAATATCG CTGGT-TTGGCT CAT AGCCAAAACCAG TTAAGTGTAAAACTA TERM 1248 1159340 - 1159365 + G 76 -4.1 -5.00884 | gap 1 AGTCTTGGTGTTTCG TTGCGCGAAG AAACAAC CTTCGC-CAA TTTTTTGGGCGCCGT Sde_0896 1159292 - 1160011 + | regulatory inactivation of DnaA Hda protein TERM 1249 1160028 - 1160067 + T 71 -8.8 -3.40175 | opp_overlap 1160021 1160025 1160029 1160030, overlap 1160026 1160025 1160029 AGTAGCAAGTAACTA ATCGCTAATTACTAGT GATTAAAA ACTAGTAATTAGCGGC TCTGTTTTAAGGCGT TERM 1250 1160029 - 1160066 + T 88 -12.3 -2.63623 | opp_overlap 1160021 1160025 1160029 1160030, overlap 1160028 1160026 1160025 GTAGCAAGTAACTAA TCGCTAATTACTAGT GATTAAAA ACTAGTAATTAGCGG CTCTGTTTTAAGGCG TERM 1251 1160066 - 1160029 - T 78 -10.1 -3.46824 | opp_overlap 1160029 1160028 1160026 1160025, overlap 1160021 1160025 1160030 GTAGCAAGTAACTAA TCGCTAATTACTAGT GATTAAAA ACTAGTAATTAGCGG CTCTGTTTTAAGGCG TERM 1252 1160065 - 1160030 - T 93 -13.6 -2.67613 | opp_overlap 1160029 1160028 1160026 1160025, overlap 1160021 1160025 1160029 TAGCAAGTAACTAAT CGCTAATTACTAGT GATTAAAA ACTAGTAATTAGCG GCTCTGTTTTAAGGC Sde_0897 1161906 - 1160074 - | translation elongation factor G Sde_0898 1162330 - 1161956 - | translation elongation factor Tu TERM 1253 1162049 - 1162039 - G 82 -5.4 -5.24551 | TTAAACCAATAAAAA TACC ATC GGTA AAGTTGGCGGTAGAG TERM 1254 1162132 - 1162113 - G 85 -6.4 -5.14949 | AATAAAATAATAAAA CACACCCA ACTA TAGGTGCG GTAGTGGTTTTGTAA TERM 1255 1162218 - 1162208 - G 72 -8.2 -3.69092 | overlap 1162209 AATAGTAATGTTAAA GCCC GAA GGGC GAGAAATATTCCAAA TERM 1256 1162255 - 1162243 - G 81 -3.3 -5.28983 | TCCAAAATATAAAAA GTGCT AAA AGCGC TGCGTAACCCATTAG Sde_0899 1162922 - 1162323 - | TRAP dicarboxylate transporter- DctP subunit Sde_0900 1163292 - 1162939 - | arsenate reductase TERM 1257 1164497 - 1164514 + G 76 -7.7 -4.23054 | GAAAAAAACTGGATA GCCGTTA CCGA TAGCGGC TTTTACGTGCTGTGT Sde_0901 1163480 - 1164781 + | tRNA-processing RNAse BN Sde_0902 1165055 - 1165420 + | response regulator receiver domain-containing protein avtA 1165507 - 1166772 + | valine--pyruvate transaminase Sde_0904 1167381 - 1166827 - | gluconate kinase TERM 1258 1167878 - 1167866 - g 70 -9.1 -3.44686 | opp_overlap 1167869, overlap 1167864 GCCAATGGAAGAAGA GCGCA TGG TGCGC ACCCTGTTAAGTCAG Sde_0905 1167555 - 1168562 + | LacI family transcription regulator TERM 1259 1168639 - 1168618 - T 90 -11.5 -3.57462 | opp_overlap 1168618 TAGCTTATTTGTAAA GCCCCTCCT AAAT AGGCGGGGC TTTTTGTTGTGGGGT TERM 1260 1168618 - 1168639 + T 100 -11.5 -5.19328 | opp_overlap 1168618 TAGCTTATTTGTAAA GCCCCTCCT AAAT AGGCGGGGC TTTTTGTTGTGGGGT Sde_0906 1171037 - 1168671 - | NdvB protein TERM 1261 1169890 - 1169879 - G 78 -5.8 -4.78572 | opp_overlap 1169885 CTTCAAGCAATAAAA TGCC GTCG GGCA TTGCACCGCTTTCTT TERM 1262 1170259 - 1170292 + g 72 -8.1 -3.74872 | overlap 1170251 1170260 TGCTCTTGCGCTGCA AGTTCGCGGCGGTAT TGCA ATACCGCTGTGGGCG TTTCGTACAATGCGT TERM 1263 1170260 - 1170291 + g 77 -11.6 -2.84602 | overlap 1170251 1170259 GCTCTTGCGCTGCAA GTTCGCGGCGGTAT TGCA ATACCGCTGTGGGC GTTTCGTACAATGCG TERM 1264 1170359 - 1170372 + g 83 -6.7 -5.05228 | GGTTGTGCAACCCGC CTTCG CCTT CGAAG TTTTTCTGGTTTACT TERM 1265 1171095 - 1171123 + r 81 -10.9 -3.24708 | opp_overlap 1171096 1171097 1171099, overlap 1171093 1171092 1171097 CTTGATTGAATACGA AGCATCGGCCACC AAG GGCGGCCGATGTG TATGTTTAGCGCGTA TERM 1266 1171122 - 1171096 - R 100 -14.4 -3.38072 | opp_overlap 1171095 1171093 1171092 1171097, overlap 1171097 1171099 TTGATTGAATACGAA GCATCGGCCACC AAG GGCGGCCGATGT GTATGTTTAGCGCGT TERM 1267 1171121 - 1171097 - R 100 -17.9 -2.62522 | opp_overlap 1171095 1171093 1171092 1171097, overlap 1171096 1171099 TGATTGAATACGAAG CATCGGCCACC AAG GGCGGCCGATG TGTATGTTTAGCGCG TERM 1268 1171097 - 1171121 + r 100 -15.7 -3.18571 | opp_overlap 1171097 1171096 1171099, overlap 1171095 1171093 1171092 TGATTGAATACGAAG CATCGGCCACC AAG GGCGGCCGATG TGTATGTTTAGCGCG TERM 1269 1171119 - 1171099 - R 100 -14.7 -2.8499 | opp_overlap 1171097 1171095 1171093 1171092, overlap 1171097 1171096 ATTGAATACGAAGCA TCGGCCACC AAG GGCGGCCGA TGTGTATGTTTAGCG Sde_0907 1172764 - 1171148 - | Na+/melibiose symporter and related transporters-like TERM 1270 1171973 - 1171952 - G 70 -5.1 -4.39696 | gap 1, overlap 1171948 TTGTAAACCAATAAA GCTGCCCATA AGG TCTGGGC-GC TCTACAAAGTATTTG TERM 1271 1173114 - 1173133 + r 86 -5.6 -5.40625 | overlap 1173116 TCGGCTACTCTTTTC GGGGGAGC ATTC GCTCCCTA TTTTTTATGTGGTGT TERM 1272 1173116 - 1173131 + r 100 -10.4 -4.32846 | overlap 1173114 GGCTACTCTTTTCGG GGGAGC ATTC GCTCCC TATTTTTTATGTGGT Sde_0908 1173699 - 1173172 - | soluble lytic murein transglycosylase-like TERM 1273 1173731 - 1173710 - R 100 -13.7 -3.73953 | gap 1, overlap 1173724 AGCATTGCGAGCAAA GGCCCCAGCC AAA GGC-GGGGCC AGCGTGCTCGGCGAA Sde_0909 1175479 - 1173752 - | Pectate lyase/Amb allergen TERM 1274 1173817 - 1173835 + g 91 -11 -4.19624 | CGGCAATGTCTTGGC TGTCGCTG TCG CGGCGACA TTTGTATTCAAGCTG TERM 1275 1174156 - 1174167 + g 73 -4.4 -4.79451 | CAATACCGTAACAGC CCAT AATC ATGG TTTTGTCTTTGCCGT TERM 1276 1174277 - 1174293 + g 70 -10.1 -3.05816 | opp_overlap 1174276 TTTGATATCAATAGT GCCCTTG CCG CAGGGGC TTGGGTCGCCAATAA TERM 1277 1174488 - 1174503 + g 71 -7.5 -3.8377 | overlap 1174479 1174479 ACTTCTGCGCCAACG GCGGC TTTAAT GCCGC TTTCGTCTGCAAATT Sde_0910 1175627 - 1176094 + | Pectate lyase/Amb allergen TERM 1278 1176136 - 1176121 - T 100 -11.8 -5.76633 | opp_overlap 1176121 TTAGATATAAAAAAA CCCCGC AAAA GCGGGG TTTTAGGTAAATATC TERM 1279 1176121 - 1176136 + T 100 -11.8 -4.20531 | opp_overlap 1176121 TTAGATATAAAAAAA CCCCGC AAAA GCGGGG TTTTAGGTAAATATC Sde_0911 1176573 - 1176166 - | DNA-binding protein HU, putative TERM 1280 1176497 - 1176513 + g 70 -2.2 -5.08824 | opp_overlap 1176510 ATTTTTTTCTCTGGA GCTGCT TTAGC AACAGC TTTTTTGGCTGGAGC TERM 1281 1176955 - 1176995 + H 73 -9.7 -3.05596 | CTGGGGTATAATGCC CGCCATTTTTCTTTGGGCA CAG TGCTCAGGGGTGGATGGCG TTACGTGAAGAGGTG TERM 1282 1177278 - 1177264 - g 72 -8.6 -3.72576 | GCGGTTGGTATGAAA CAGACT TTA AGTCTG GCAAAAAGAAAAACA TERM 1283 1177305 - 1177292 - g 91 -6.7 -5.61881 | TGGCAAAAAGAAAAA CATCG CTGG CGATG GTGGTGGCTCAAGCA Sde_0912 1177098 - 1177334 + | hypothetical protein TERM 1284 1177722 - 1177741 + G 73 -10.8 -3.05384 | opp_overlap 1177721 AGATTTTGAACTCAG CTGAAACG CCGC CGTTTCAG TTGGATGAGCACACC TERM 1285 1177910 - 1177938 + G 71 -7.3 -4.02571 | overlap 1177911 GAAACACCTATTCTT ACGCGCGCAAC ACCAGAA GGTGCGCGCGA TTATTTGGTGCCTTC TERM 1286 1177911 - 1177937 + G 73 -10.8 -3.0082 | overlap 1177910 AAACACCTATTCTTA CGCGCGCAAC ACCAGAA GGTGCGCGCG ATTATTTGGTGCCTT aspS 1177409 - 1179193 + | aspartyl-tRNA synthetase TERM 1287 1179265 - 1179290 + F 100 -12.6 -5.76237 | opp_overlap 1179265 GTGTGTACTAGTAAA GGGAAGCCGT GTAAAA GCGGCTTCCC TTTTTTGTTTCTATC TERM 1288 1179290 - 1179265 - f 100 -11.9 -3.78775 | opp_overlap 1179265 GTGTGTACTAGTAAA GGGAAGCCG TGTAAAAG CGGCTTCCC TTTTTTGTTTCTATC TERM 1289 1180053 - 1180032 - g 76 -4.3 -5.00616 | gap 1, overlap 1180033 1180034 GCCTTTTTGAAAAAA GTGCCTGCCG CCA CGGCCAGC-C TTGCGAACTCATCTG Sde_0914 1179342 - 1180571 + | alanine racemase Sde_0915 1180564 - 1181562 + | biotin--(acetyl-CoA-carboxylase) ligase Sde_0916 1181559 - 1182341 + | Baf family transcriptional regulator Sde_0917 1182490 - 1183161 + | hypothetical protein TERM 1290 1183534 - 1183570 + F 81 -7.4 -4.67048 | gap 2 TGAGTTGCAAAGCTG GCCCGAATCGTT-G-GCG TAA CGCTTAAATGGTTCGGGC TTTGTTTTAGGGTGG TERM 1291 1183754 - 1183738 - f 76 -10.9 -2.62616 | opp_overlap 1183721, overlap 1183721 1183740 TCAGTTGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCACCAGTTCAA TERM 1292 1183828 - 1183850 + F 73 -5.5 -4.6902 | opp_overlap 1183828, overlap 1183849 GTAGCTCTAGCAAAA GGTCAGCGT GCATA GCTCTGACC TTTTTGCGATTGTAA Sde_0918 1184003 - 1184368 + | protein translocase subunit secE/sec61 gamma TERM 1293 1184443 - 1184430 - g 76 -2.3 -5.31275 | overlap 1184431 GGCTACGAGAAAAAA GTGGC GGCA GCCAT CAAAGAGCGTATTGA Sde_0919 1184379 - 1184912 + | transcription antitermination protein nusG TERM 1294 1184938 - 1184966 + F 91 -10.3 -4.21827 | AGGTATTAAAGTTTT GCCTTCTTCTGAT TGT GTCGGGAGAGGGC TTTTGGCGTCTTTGC TERM 1295 1185117 - 1185103 - g 71 -10 -3.28261 | overlap 1185092 AGAAGCTTATATCAA GCTGCA AGT TGCAGC AGGTAAAGCAAACCC Sde_0920 1185074 - 1185505 + | 50S ribosomal protein L11P Sde_0921 1185507 - 1186202 + | GntR family transcriptional regulator TERM 1296 1186523 - 1186513 - g 91 -6.8 -5.47159 | CTCGAAGACAAAAAA GCGA TTG TCGC TGAAGTTAACGAGAC Sde_0922 1186486 - 1187016 + | 50S ribosomal protein L10P TERM 1297 1187046 - 1187002 - f 77 -6.5 -4.72272 | opp_overlap 1187008, overlap 1187005 1187007 1187008 GTTCGCGACCAAAAA CAAGACGCAGCTTAATTCCAA TAA TTGGAATCAACCTGCTTTTAG TAAACAAATTTAATG TERM 1298 1187043 - 1187005 - f 76 -6.8 -4.47707 | opp_overlap 1187008, overlap 1187002 1187007 1187008 CGCGACCAAAAACAA GACGCAGCTTAATTCCAA TAA TTGGAATCAACCTGCTTT TAGTAAACAAATTTA TERM 1299 1187041 - 1187007 - f 81 -9.4 -3.84027 | opp_overlap 1187008, overlap 1187005 1187002 1187008 CGACCAAAAACAAGA CGCAGCTTAATTCCAA TAA TTGGAATCAACCTGCT TTTAGTAAACAAATT TERM 1300 1187008 - 1187040 + F 100 -10.7 -4.25283 | opp_overlap 1187007 1187005 1187002 1187008 GACCAAAAACAAGAC GCAGCTTAATTCCAA TAA TTGGAATCAACCTGC TTTTAGTAAACAAAT TERM 1301 1187040 - 1187008 - f 91 -12.9 -2.89331 | opp_overlap 1187008, overlap 1187007 1187005 1187002 GACCAAAAACAAGAC GCAGCTTAATTCCAA TAA TTGGAATCAACCTGC TTTTAGTAAACAAAT Sde_0923 1187077 - 1187457 + | 50S ribosomal protein L12P TERM 1302 1187487 - 1187469 - f 80 -10.2 -3.54459 | opp_overlap 1187470, overlap 1187470 GTAAGTTGTTTCAAA GCGAGGGC TTT GCCCTCGT TTGAGGATGGGTCAG TERM 1303 1187486 - 1187470 - f 93 -13.7 -2.72461 | opp_overlap 1187470, overlap 1187469 TAAGTTGTTTCAAAG CGAGGGC TTT GCCCTCG TTTGAGGATGGGTCA TERM 1304 1187470 - 1187486 + F 100 -13.7 -3.57792 | opp_overlap 1187470 1187469 TAAGTTGTTTCAAAG CGAGGGC TTT GCCCTCG TTTGAGGATGGGTCA TERM 1305 1187497 - 1187522 + F 83 -8.9 -4.24002 | CCTCGTTTGAGGATG GGTCAGTCGGC TTTA GTCGTCTGGCC TTTTCCCGTTTGCGG TERM 1306 1190767 - 1190745 - g 72 -10.6 -2.78216 | GATTCGTATGAATGA CGATGTGCTC AAT GAGCAAATCG ATGCCGCTGAAGTTG TERM 1307 1191664 - 1191654 - g 72 -3.2 -4.91459 | overlap 1191642 TAAGATGTATAAAAA CATC GTA GACG GTGACCACCGCATGG rpoB 1187680 - 1191765 + | DNA-directed RNA polymerase subunit beta TERM 1308 1191996 - 1192026 + G 72 -9.1 -3.48593 | gap 1, opp_overlap 1191996 1192001 AGAAACCATTAACTA CAGAACCTTCAAGC CTGA GCGTGAAGG-TCTG TTCTGTGCCAAAGTA TERM 1309 1195778 - 1195743 - g 72 -6.3 -4.25104 | gap 3, opp_overlap 1195743 CGTTCTGCAGGAAAA CGAG-AAGTTG-CGTGCC GAA GGC-CGTCAACCTGCTCG TTTCGAGCGACAATT Sde_0925 1191859 - 1196091 + | DNA-directed RNA polymerase subunit beta' TERM 1310 1196121 - 1196095 - f 73 -3.5 -4.91511 | overlap 1196081 1196096 1196098 1196113 AGCGCATCATAAAAA TGAGGCGGCCT GCATA AGGTCGCCGCT GCCACATCTGTAATA TERM 1311 1196165 - 1196205 + F 100 -14.2 -3.21099 | gap 1, opp_overlap 1196170 1196189, overlap 1196170 TGGTTTACGTATTGA CGAGAGTGGGTGGTGTCAT TACA ATG-CGCCACCCACTTTTG TTAGTGGTGGGCAAC TERM 1312 1196170 - 1196200 + F 100 -12.7 -4.73613 | gap 1, opp_overlap 1196170 1196189, overlap 1196165 TACGTATTGACGAGA GTGGGTGGTGTCAT TACA ATG-CGCCACCCAC TTTTGTTAGTGGTGG TERM 1313 1196200 - 1196170 - f 75 -10.5 -2.81133 | gap 1, opp_overlap 1196165 1196170, overlap 1196189 TACGTATTGACGAGA GTGGGTGGTGTCAT TACA ATG-CGCCACCCAC TTTTGTTAGTGGTGG TERM 1314 1196214 - 1196228 + F 100 -10 -4.99645 | opp_overlap 1196189 ACTTTTGTTAGTGGT GGGCAA CTA TTGCCC TTTTATTTGTAACGT TERM 1315 1196242 - 1196258 + F 70 -3.6 -4.81249 | overlap 1196243 CCTTTTATTTGTAAC GTGCCC ATTTA GGGCAG TTTTTGAATTTGGAG rpsL 1196283 - 1196654 + | 30S ribosomal protein S12 Sde_0927 1196767 - 1197237 + | 30S ribosomal protein S7 TERM 1316 1197272 - 1197290 + F 75 -7.4 -4.26189 | opp_overlap 1197272, overlap 1197266 GTTAGTGCAGTAAAA GGCAGC AATTACA GCTGCC TTTTAGCGTTTATAC TERM 1317 1197290 - 1197272 - f 75 -7.4 -4.26903 | opp_overlap 1197266 1197272 GTTAGTGCAGTAAAA GGCAGC AATTACA GCTGCC TTTTAGCGTTTATAC TERM 1318 1197354 - 1197325 - f 80 -11.6 -2.71857 | gap 1, opp_overlap 1197318 1197325, overlap 1197324 TATAAAAGTCAGAAC CCCAGCATACGAG TTACC CTC-TATGCTGGG TGTGTCTAGAATTTT TERM 1319 1197325 - 1197354 + F 83 -11.6 -3.02109 | gap 1, opp_overlap 1197325 1197324, overlap 1197318 TATAAAAGTCAGAAC CCCAGCATACGAG TTACC CTC-TATGCTGGG TGTGTCTAGAATTTT Sde_0928 1197399 - 1199504 + | translation elongation factor 2 (EF-2/EF-G) TERM 1320 1199552 - 1199566 + F 76 -7.8 -4.15044 | AGTTGAAACCCTATA CCCTGT TTT ACGGGG TTTGTTACAGAGGAA Sde_0929 1199589 - 1200812 + | elongation factor Tu TERM 1321 1200845 - 1200863 + T 100 -12.4 -5.86332 | opp_overlap 1200845 AAGCTTGCCGAAAAA GGCTCCTC TTT GAGGGGCC TTTTTTTTGCCTTAA TERM 1322 1200863 - 1200845 - T 100 -10.2 -4.57341 | opp_overlap 1200845 AAGCTTGCCGAAAAA GGCTCCTC TTT GAGGGGCC TTTTTTTTGCCTTAA TERM 1323 1200963 - 1200940 - T 100 -11.6 -5.4833 | opp_overlap 1200940 CTAGGCAATAAAAAA CCCCGCAAGC TTTC GCCGGCGGGG TTTTCGCTAGAAGCT TERM 1324 1200940 - 1200963 + T 85 -9.4 -4.18197 | opp_overlap 1200940 CTAGGCAATAAAAAA CCCCGCAAGC TTTC GCCGGCGGGG TTTTCGCTAGAAGCT fusA 1203084 - 1200991 - | elongation factor G TERM 1325 1203293 - 1203281 - H 87 -5.5 -5.47218 | opp_overlap 1203281 CGCTAGTCAAAAAAA CACCA AAT TGGCG TGTTTTAAACAAATA Sde_0931 1203474 - 1204697 + | elongation factor Tu TERM 1326 1204730 - 1204748 + F 100 -12.4 -5.60993 | opp_overlap 1204730 AAGCTTGCCGAAAAA GGCTCCTC TTT GAGGGGCC TTTTTTTATGGGCGA TERM 1327 1204748 - 1204730 - f 100 -10.2 -4.57341 | opp_overlap 1204730 AAGCTTGCCGAAAAA GGCTCCTC TTT GAGGGGCC TTTTTTTATGGGCGA TERM 1328 1205033 - 1205053 + F 100 -8.2 -5.45726 | overlap 1205034 AGTACACTTAGGTTG CGCGGGCT TTAAT AGCCCGCA TTTTTTTAACGTGTA TERM 1329 1205034 - 1205052 + F 95 -11.7 -3.86351 | overlap 1205033 GTACACTTAGGTTGC GCGGGCT TTAAT AGCCCGC ATTTTTTTAACGTGT Sde_0932 1205133 - 1206128 + | ribosomal protein L22 Sde_0933 1206138 - 1206632 + | ribosomal protein S3 Sde_0934 1206681 - 1207988 + | ribosomal protein L16 TERM 1330 1207986 - 1208033 + F 100 -16.4 -3.77722 | opp_overlap 1207996, overlap 1207996 CTATACGATAAGCCC TAAAGTTAAAGCGCCGAATGGG TTTC CCCATTCGGCGCTTTGCCGCTA TTATTGCTGATTAAC TERM 1331 1208023 - 1207996 - f 100 -21.4 -3.84719 | opp_overlap 1207986 1207996 AGCCCTAAAGTTAAA GCGCCGAATGGG TTTC CCCATTCGGCGC TTTGCCGCTATTATT TERM 1332 1207996 - 1208023 + F 100 -21.4 -3.62176 | opp_overlap 1207996, overlap 1207986 AGCCCTAAAGTTAAA GCGCCGAATGGG TTTC CCCATTCGGCGC TTTGCCGCTATTATT Sde_0935 1208089 - 1209378 + | 6-phosphofructokinase TERM 1333 1209579 - 1209562 - g 73 -4.1 -4.87665 | opp_overlap 1209562 GTGTAGCGAGAAAAA TGGATGG TGCC CCATACA CTCATTTTCTAAAAG Sde_0936 1209468 - 1209851 + | ribosomal protein L14 TERM 1334 1209859 - 1209876 + F 100 -9.1 -5.88197 | opp_overlap 1209859 TGTTATAGATTAAAA GGCGCTT ATAA AGGCGCC TTTTTTTGTATTTAA TERM 1335 1209876 - 1209859 - f 74 -6.9 -4.39166 | opp_overlap 1209859 TGTTATAGATTAAAA GGCGCTT ATAA AGGCGCC TTTTTTTGTATTTAA Sde_0937 1209912 - 1211195 + | ribosomal protein L24 Sde_0938 1211588 - 1212514 + | hypothetical protein Sde_0939 1213526 - 1212570 - | 2-keto-3-deoxygluconate kinase TERM 1336 1212685 - 1212695 + g 76 -8.2 -4.07568 | TGCGCTGCTTTTACT GGGG GTT CCCC TTTTAAGCGGGCAGA TERM 1337 1214368 - 1214404 + G 71 -7.2 -4.03174 | gap 1, opp_overlap 1214368, overlap 1214365 TTACGACGGCATTAA CGCTGCGCTGCAAACAC CAGA GTTCTTGCCGCGC-GCG TTGTTTGATCGGTTT Sde_0940 1213937 - 1215352 + | glucuronate isomerase TERM 1338 1215387 - 1215413 + F 73 -5.2 -4.68424 | gap 2, opp_overlap 1215387, overlap 1215398 TTTTTCTCTTTAAAA CGGCCC-T-CTC TGCCC GAGCATGGGCCG TTTTTACATAGGTTA Sde_0941 1215435 - 1216913 + | putative D-mannonate oxidoreductase protein Sde_0942 1217531 - 1219840 + | ribosomal protein L18 TERM 1339 1219899 - 1219926 + F 91 -6.3 -5.50499 | opp_overlap 1219914 GTAAAAATCCAAGGA TGGGTGGAG ATAAATTAGG CTCCGCCCA TTTTTTTGAGTATCG TERM 1340 1222880 - 1222856 - g 72 -6.5 -4.24342 | CTGTTGAGCAACAAA TTTTGGATGCT ATA AGCACCGAAAA CCACAACTGGATTGT Sde_0943 1220113 - 1224063 + | ribosomal protein S5 TERM 1341 1224173 - 1224150 - f 83 -11 -3.56704 | opp_overlap 1224150, overlap 1224146 GGGTGATTAAATGAA GGGGCTGAAG TTTT CTTTAGCCCC TTTTTTCGTTTATAA TERM 1342 1224150 - 1224173 + F 100 -13.2 -5.42514 | opp_overlap 1224146 1224150 GGGTGATTAAATGAA GGGGCTGAAG TTTT CTTTAGCCCC TTTTTTCGTTTATAA TERM 1343 1224304 - 1224294 - g 73 -4.6 -4.77173 | CGCCGACAAAATAAA GCGC AAT ACGC CTTTAACCGAAACGG TERM 1344 1224327 - 1224317 - g 72 -8.2 -3.75153 | CGCCTTTAACCGAAA CGGC ATT GCCG AGTAAAAAAATACTC TERM 1345 1225246 - 1225259 + G 79 -2.3 -5.47399 | ACGCTAGTGTTTACG CCCGA GCAA TCGCG TTTTTTTGAAGTTCA Sde_0944 1224214 - 1225383 + | ribosomal protein L30 Sde_0945 1225425 - 1226291 + | ribosomal protein L15 Sde_0946 1226359 - 1227312 + | SecY protein TERM 1346 1227378 - 1227407 + T 74 -4.2 -4.9138 | gap 1, opp_overlap 1227381, overlap 1227378 1227379 ATGTAGGAAGGGGAA T-AACCGCTCGGG AGAGC CCCGAGCGGAACA TTTTATTTGGCTAAT TERM 1347 1227403 - 1227381 - T 100 -17 -3.68936 | opp_overlap 1227379 1227378 1227378 TAGGAAGGGGAATAA CCGCTCGGGA GAG CCCCGAGCGG AACATTTTATTTGGC Sde_0947 1228054 - 1227410 - | ribosomal protein L36 Sde_0948 1229758 - 1228337 - | hypothetical protein TERM 1348 1229440 - 1229418 - G 76 -4.9 -4.77165 | gap 1, opp_overlap 1229418 1229421 1229424 1229426, overlap 1229413 GCTTGCACAATAAAA GGT-TCGCCT CGCA AGGCAATACC TTTTGGCGATGTTTG TERM 1349 1229721 - 1229686 - G 74 -6.8 -4.36595 | gap 1, overlap 1229680 1229687 CAGGGAAAGCCAAAA CCGCGC-CGGCATAGGT GGA ACTTGTGCCGCACGCGA CAGCCAATAAAAGAC Sde_0949 1230557 - 1229763 - | gluconate 5-dehydrogenase TERM 1350 1230325 - 1230335 + g 72 -8.2 -3.70007 | TCTATTTTTTCTACG GCGG CTT CCGC TTCGTTTTCGCTGGT TERM 1351 1230390 - 1230415 + g 85 -3.4 -5.4833 | overlap 1230394 GTTAATGCCTTGTTC TTTATAAAGC TCTACC GCTTTATCAA TTTTTTCTTGGCTGG TERM 1352 1230460 - 1230446 - G 76 -9.2 -3.72592 | opp_overlap 1230445 1230446 AATGGCCATTAATAA CCAGCG TGG CGCCGG CTTTACCTAAGCCAA Sde_0950 1231416 - 1230574 - | 5-keto-4-deoxyuronate isomerase TERM 1353 1231311 - 1231347 + g 72 -3.1 -5.05601 | opp_overlap 1231320 1231322, overlap 1231320 1231322 GTTGCACAGTGTCCG CTTCAAAAATATTTTCT ATT AGAAAATGTTTACGCAG TTTTTCTGTGTCGTA Sde_0951 1233919 - 1231436 - | DNA-directed RNA polymerase, alpha subunit TERM 1354 1232140 - 1232121 - G 72 -2.8 -5.0133 | TACTCGGCTAAAAAA GGCATTCC CATA AAAACGCC ATCTAGCCACAGCTG TERM 1355 1234023 - 1234000 - R 100 -13.9 -5.0916 | GCTTCAATACAAAAA TGGCGCCAG AACAAG CTGGCGCCA CTCGAAGAGTTAATA Sde_0952 1236770 - 1234050 - | ribosomal protein L17 TERM 1356 1234638 - 1234654 + g 79 -7.9 -4.46926 | overlap 1234639 TTCGCTAGCGGGAAT GCCCAGC TCA GCTGGGG TTTTCTGGTCGCGTA TERM 1357 1234639 - 1234653 + g 77 -11.4 -3.27674 | overlap 1234638 TCGCTAGCGGGAATG CCCAGC TCA GCTGGG GTTTTCTGGTCGCGT TERM 1358 1236965 - 1237001 + r 86 -11.8 -3.06315 | gap 1, opp_overlap 1236978, overlap 1236978 TGATTTATAGGTGCA GCGCTGTATAAAACCCG TGTG CGGGTTTTATGTAG-GC TCTTGGAAATATTAG TERM 1359 1236978 - 1236989 + r 78 -7.2 -4.54449 | opp_overlap 1236978, overlap 1236965 CAGCGCTGTATAAAA CCCG TGTG CGGG TTTTATGTAGGCTCT TERM 1360 1236989 - 1236978 - R 75 -7.2 -4.3739 | opp_overlap 1236978 1236965 CAGCGCTGTATAAAA CCCG TGTG CGGG TTTTATGTAGGCTCT TERM 1361 1237021 - 1237059 + r 100 -13.9 -3.58343 | opp_overlap 1237018, overlap 1237025 GGAAATATTAGACGG TATTTCATGGCGCGCCA GTTGA TGGCGCGCCATGATGCA TTTAGGCGTGATCGA TERM 1362 1237025 - 1237055 + r 100 -21.3 -2.64803 | opp_overlap 1237018, overlap 1237021 ATATTAGACGGTATT TCATGGCGCGCCA GTTGA TGGCGCGCCATGA TGCATTTAGGCGTGA Sde_0953 1238508 - 1237117 - | glycoside hydrolase family protein TERM 1363 1237692 - 1237675 - G 73 -2 -5.14965 | ACCGGTATTAAAAAA GCAGTT TTCGAT AACTAC ATTCTTACAGCTTTC TERM 1364 1238181 - 1238167 - G 80 -5.6 -5.00616 | opp_overlap 1238167 1238168, overlap 1238168 GGGGTCGGTAAAAAA GGCGAT GGT AGCGCC TTCGCTAATATGAAG TERM 1365 1238664 - 1238644 - R 91 -6.8 -5.44119 | opp_overlap 1238644 1238643 TTTAGGCGAAAAAAA GCCGGCAT GCGAG ATGTCGGC CTTTTAATGTAGTGT Sde_0954 1239451 - 1238684 - | GntR family transcriptional regulator Sde_0955 1239717 - 1241243 + | glycogen debranching protein GlgX TERM 1366 1241308 - 1241320 + F 93 -9.1 -4.4648 | AGCTTCGGTTGATCT GCCCT ATT AGGGC TTTTCTGCTCAAGGT Sde_0956 1241393 - 1242568 + | glycogen/starch/alpha-glucan phosphorylase Sde_0957 1242579 - 1242863 + | glucose-1-phosphate adenylyltransferase Sde_0958 1242879 - 1244297 + | NAD(P) transhydrogenase, beta subunit TERM 1367 1244326 - 1244362 + F 95 -6 -5.71983 | gap 1, overlap 1244316 ATTTCGCTGCGAAAA CACCGGTTTTTGGGCTT ATTA AAGCTTGAAA-TCGGTG TTTTTTTATAATTGA Sde_0959 1244548 - 1244859 + | SSU ribosomal protein S10P TERM 1368 1244875 - 1244890 + F 75 -8.2 -3.87627 | overlap 1244874 AACTCCTAAGATTTG CCGGCG ATTT TGCCGG TCTTTTGTGTAACGC Sde_0960 1244962 - 1245606 + | 50S ribosomal protein L3P TERM 1369 1245792 - 1245776 - g 72 -6.5 -4.25074 | opp_overlap 1245779, overlap 1245768 1245779 TACTAAAGCTCAAAA GAACCGC GCT GCGGTTT CTGGCGGCGGCAAAA TERM 1370 1245779 - 1245789 + G 74 -8.2 -3.85698 | opp_overlap 1245776 1245779 TAAAGCTCAAAAGAA CCGC GCT GCGG TTTCTGGCGGCGGCA TERM 1371 1245789 - 1245779 - g 79 -8.2 -4.2354 | opp_overlap 1245779, overlap 1245776 TAAAGCTCAAAAGAA CCGC GCT GCGG TTTCTGGCGGCGGCA Sde_0961 1245627 - 1246241 + | 50S ribosomal protein L4P Sde_0962 1246238 - 1246534 + | 50S ribosomal protein L23P rplB 1246548 - 1247375 + | 50S ribosomal protein L2 rpsS 1247409 - 1247684 + | 30S ribosomal protein S19 TERM 1372 1247694 - 1247673 - f 70 -5.1 -4.41114 | gap 1, overlap 1247678 GTAGCAGATAAGAAA GC-TAAGCGC TAA GCGCTGAAGC TAGGCGAGGTAGAAT TERM 1373 1247688 - 1247678 - f 71 -8.2 -3.4055 | overlap 1247673 AGATAAGAAAGCTAA GCGC TAA GCGC TGAAGCTAGGCGAGG rplV 1247711 - 1248043 + | 50S ribosomal protein L22 rpsC 1248056 - 1248730 + | 30S ribosomal protein S3 rplP 1248769 - 1249182 + | 50S ribosomal protein L16 TERM 1374 1249623 - 1249607 - g 83 -9.5 -4.18018 | overlap 1249612 GTCCTCTATCGAAAA CAAAGTC TTG GACTTTG GTTAAAATCGAAGAG rpsQ 1249390 - 1249656 + | 30S ribosomal protein S17 rplN 1249694 - 1250062 + | 50S ribosomal protein L14 Sde_0970 1250096 - 1250413 + | 50S ribosomal protein L24P rplE 1250520 - 1250984 + | 50S ribosomal protein L5 rpsN 1250998 - 1251303 + | 30S ribosomal protein S14 Sde_0973 1251332 - 1251724 + | SSU ribosomal protein S8P rplF 1251763 - 1252296 + | 50S ribosomal protein L6 Sde_0975 1252366 - 1252716 + | 50S ribosomal protein L18P rpsE 1252727 - 1253239 + | 30S ribosomal protein S5 Sde_0977 1253281 - 1253466 + | 50S ribosomal protein L30P Sde_0978 1253468 - 1253902 + | 50S ribosomal protein L15P TERM 1375 1254001 - 1253971 - g 71 -3.9 -4.8622 | opp_overlap 1253972 1253973, overlap 1253972 1253973 GTTGGTAATCAAAAA GGTTTGGGCGAGC TTTGG GCTCGCCTAAAAT TTTTGCTGTTAGCGA TERM 1376 1253972 - 1254000 + G 100 -10.3 -4.87626 | opp_overlap 1253971 1253972 1253973, overlap 1253973 TTGGTAATCAAAAAG GTTTGGGCGAGCT TTG GGCTCGCCTAAAA TTTTTGCTGTTAGCG TERM 1377 1253999 - 1253973 - g 73 -10.9 -2.70268 | opp_overlap 1253973 1253972, overlap 1253972 1253971 TGGTAATCAAAAAGG TTTGGGCGAGC TTTGG GCTCGCCTAAA ATTTTTGCTGTTAGC TERM 1378 1253973 - 1253999 + G 93 -13.8 -3.51853 | opp_overlap 1253972 1253971 1253973, overlap 1253972 TGGTAATCAAAAAGG TTTGGGCGAGCT TTG GGCTCGCCTAAA ATTTTTGCTGTTAGC TERM 1379 1254004 - 1254016 + G 83 -4.1 -5.38958 | overlap 1254013 GCTCGCCTAAAATTT TTGCT GTT AGCGA TTTTTATTTATCGCT Sde_0979 1253932 - 1255275 + | protein translocase subunit secY/sec61 alpha rpmJ 1255297 - 1255413 + | 50S ribosomal protein L36 TERM 1380 1255527 - 1255560 + F 80 -3.7 -5.26316 | overlap 1255531 1255533 GAATTGGAGGCGTTA ACTGTCGCTCGATGG GAAA CCATCGGGCTATTGC TTTTTTGTGGCATAA TERM 1381 1255531 - 1255556 + F 86 -9.7 -3.99236 | overlap 1255527 1255533 TGGAGGCGTTAACTG TCGCTCGATGG GAAA CCATCGGGCTA TTGCTTTTTTGTGGC TERM 1382 1255533 - 1255554 + F 100 -12.3 -3.56985 | overlap 1255531 1255527 GAGGCGTTAACTGTC GCTCGATGG GAAA CCATCGGGC TATTGCTTTTTTGTG TERM 1383 1255578 - 1255611 + F 83 -10.9 -3.5518 | opp_overlap 1255577 TTTTGTGGCATAACC GCTATCCTTCCGCGC CTTT GCGCAGTGGGATGGC TTATGTCACTGTTAG rpsM 1255660 - 1256016 + | 30S ribosomal protein S13 TERM 1384 1256113 - 1256101 - g 81 -4.8 -5.16071 | opp_overlap 1256101, overlap 1256102 1256112 AACGACCAAGAAAAA GGTC AAAAA GACC GTTGTTGACGGAATC Sde_0982 1256063 - 1256458 + | 30S ribosomal protein S11 Sde_0983 1256471 - 1257091 + | SSU ribosomal protein S4P Sde_0984 1257131 - 1258120 + | DNA-directed RNA polymerase subunit alpha TERM 1385 1258165 - 1258121 - f 71 -8.8 -3.37869 | gap 2, opp_overlap 1258121 1258124, overlap 1258124 AAAAACAACGATTAA TCATTTCGTTACGAGCTGAGCT GTG AGCTCGGCTCGAAAC-AAA-GA TTTGAAAGGTATTGA TERM 1386 1258121 - 1258165 + F 84 -11 -3.57615 | gap 2, opp_overlap 1258121 1258124, overlap 1258124 AAAAACAACGATTAA TCATTTCGTTACGAGCTGAGCT GTG AGCTCGGCTCGAAAC-AAA-GA TTTGAAAGGTATTGA TERM 1387 1258124 - 1258164 + F 95 -14.1 -2.74248 | opp_overlap 1258121 1258124, overlap 1258121 AACAACGATTAATCA TTTCGTTACGAGCTGAGCT GTG AGCTCGGCTCGAAACAAAG ATTTGAAAGGTATTG TERM 1388 1258164 - 1258124 - f 83 -11.9 -2.8293 | opp_overlap 1258124 1258121, overlap 1258121 AACAACGATTAATCA TTTCGTTACGAGCTGAGCT GTG AGCTCGGCTCGAAACAAAG ATTTGAAAGGTATTG Sde_0985 1258184 - 1258582 + | 50S ribosomal protein L17P TERM 1389 1258605 - 1258591 - f 100 -12.8 -4.49352 | opp_overlap 1258591 AGATTAAAATAGAAA CCGGGC TTA GCCCGG TTTTTTTTCGCCTAT TERM 1390 1258591 - 1258605 + F 100 -12.8 -5.79526 | opp_overlap 1258591 AGATTAAAATAGAAA CCGGGC TTA GCCCGG TTTTTTTTCGCCTAT TERM 1391 1259880 - 1259890 + G 84 -8.2 -4.63527 | overlap 1259872 TGGTGCGGTGCTAGA GCGC TTT GCGC TTTTTGAAGTCATGA TERM 1392 1260140 - 1260155 + G 71 -3.3 -4.80453 | GTGGCGGTGCTGAGG TGTTG AGCAAC CAACA TTTGTTTTGTGCTAA TERM 1393 1260349 - 1260379 + G 76 -11.8 -2.59742 | overlap 1260348 ATGGGGTTGATGCGC CTGTGGTGGTGCCC TCC GGGCAAAACCGCAG ATTATGGCGCTTACG TERM 1394 1260823 - 1260837 + G 88 -8.6 -4.73682 | opp_overlap 1260820 1260823 1260825 GTGCATGAAACAGCA GACCAA AAT TTGGTC TTTTCTATTATGAAG Sde_0986 1258888 - 1261062 + | 4-alpha-glucanotransferase TERM 1395 1262610 - 1262635 + G 72 -4.8 -4.65933 | overlap 1262608 ACGACATGACATTTA GTTTGCACTA TGCCTT TAGTGAAAAC TTTGTTTTACCGCTA Sde_0987 1261070 - 1263259 + | glycogen branching enzyme TERM 1396 1263538 - 1263563 + G 75 -9.7 -3.53811 | gap 1 ACCGAGTGTACGGCC CCTACGAGCCGC AGC GCGGC-CATAGG TTTAACCCCAATAAA TERM 1397 1265207 - 1265194 - g 73 -2.4 -5.24129 | GGGTGTTAGAAAAAA TTCC TGTGGC GGAA GATTCAGATAAAAAA Sde_0988 1263294 - 1265444 + | glycogen operon protein Sde_0989 1265504 - 1267954 + | phosphorylase TERM 1398 1269253 - 1269234 - g 75 -2.8 -5.26875 | opp_overlap 1269221, overlap 1269235 CGTGTAACGAAAAAA GGCGTTAC GTTG GTAACACG AGAAATGCTTGGTCA Sde_0990 1268019 - 1269296 + | glucose-1-phosphate adenylyltransferase TERM 1399 1270180 - 1270166 - g 83 -4.2 -5.41746 | AACCTTCCAAAAAAA CTGTGG TGG CAACAG CGTTAGCTGCCGTAG Sde_0991 1269298 - 1270848 + | starch (glycogen) synthase TERM 1400 1270889 - 1270904 + F 100 -7.5 -6.14618 | opp_overlap 1270889 AACACTTTTGTAAAA CGCCC AATTCA GGGCG TTTTTTTATTTTCTA TERM 1401 1270904 - 1270889 - f 73 -7.5 -4.09511 | opp_overlap 1270889 AACACTTTTGTAAAA CGCCC AATTCA GGGCG TTTTTTTATTTTCTA TERM 1402 1270972 - 1271000 + F 83 -9 -4.1413 | gap 1 TATACTTAAAGTGTA GCTG-CAATAACG GTTG CGTTATTGGCGGC TTTTGGAAATATATT TERM 1403 1272313 - 1272331 + G 75 -3.1 -5.19879 | gap 1, overlap 1272314 TAGTCCTACTTTCTC TGCCT-GC TTTG GCGAGGCG TTTTTATCTTTACAC Sde_0992 1271066 - 1272721 + | phosphoenolpyruvate carboxykinase TERM 1404 1272759 - 1272735 - T 100 -14.4 -4.21631 | opp_overlap 1272730 1272728 AATGGAGGGAATAAA GTGCAGCAGT TAGAC ACTGCTGCAC ATAGCCTATTTTTAA Sde_0993 1275637 - 1272797 - | excinuclease ABC subunit A TERM 1405 1275201 - 1275214 + g 79 -8.1 -4.27617 | AGCAGCATAACCTTA CTGCC TTCG GGCAG TTTTAGTACGGTATC Sde_0994 1276484 - 1275819 - | response regulator receiver domain-containing protein TERM 1406 1277485 - 1277519 + G 79 -9.8 -3.78934 | opp_overlap 1277483 CCCGCCGCAAGTAGG GCACTCTCACCGCGAC AGT GGCGCGGTGCCAGAGC TTATTATGCAAACCC TERM 1407 1277657 - 1277680 + G 79 -11.8 -3.13475 | opp_overlap 1277659 ATTCCTCGGGGTAAG CATTGGCAGG TTTA CTTGCCAATG TTGGCTATCGCGTTG Sde_0995 1276856 - 1278271 + | DNA polymerase III, alpha subunit Sde_0996 1278410 - 1278937 + | single-stranded DNA-binding protein TERM 1408 1278960 - 1278978 + F 100 -9.6 -5.3104 | opp_overlap 1278960 ACGTTTTGCAGGTAA GCCCTAAG TTC TTTAGGGC TTTTCTTTTTGCTCG Sde_0997 1279011 - 1279910 + | dTDP-4-dehydrorhamnose reductase-like TERM 1409 1279948 - 1279967 + T 100 -13.6 -5.0925 | opp_overlap 1279948 TTTGCCAATAAAAAA GGCCGCTT AAGT AAGCGGCC TTTTTAGTTTTCGCG TERM 1410 1279967 - 1279948 - T 100 -13.6 -5.4505 | opp_overlap 1279948 TTTGCCAATAAAAAA GGCCGCTT AAGT AAGCGGCC TTTTTAGTTTTCGCG Sde_0998 1281223 - 1280006 - | 3-oxoacyl-[acyl-carrier-protein] synthase I Sde_0999 1281864 - 1281340 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1411 1283040 - 1283056 + G 71 -3.7 -4.86731 | GGCAGTGTTGCCGGG TTTGTAG AAG CTACCAA TTTTGTTTACGAGAA Sde_1000 1282263 - 1283087 + | UDP-glucose pyrophosphorylase TERM 1412 1283323 - 1283352 + G 70 -10.8 -2.55712 | gap 1, overlap 1283320 ACCTAACAGATGCGC TGGCACGCGGCAT GACCG ATGCCG-GTGCCG ATGTTGTGCATATAG TERM 1413 1284290 - 1284274 - g 85 -12.3 -3.40611 | overlap 1284272 GCGAGCGCAACAATA CTGTGGG TAA CCCACAG GCAATTGCGGCGGCA Sde_1001 1283148 - 1284509 + | phosphomannomutase TERM 1414 1284552 - 1284535 - T 100 -14.1 -5.04222 | opp_overlap 1284535 TAAGCAAACTAAAAA CGGCGCC AATT GGCGCCG TTTCTTTATCTGTGT TERM 1415 1284535 - 1284552 + T 100 -14.1 -4.66625 | opp_overlap 1284535 TAAGCAAACTAAAAA CGGCGCC AATT GGCGCCG TTTCTTTATCTGTGT Sde_1002 1285022 - 1284558 - | hypothetical protein Sde_1003 1285827 - 1285045 - | hypothetical protein Sde_1004 1286686 - 1285814 - | hypothetical protein TERM 1416 1285868 - 1285880 + g 75 -2.6 -5.1517 | TAGCGCGTACTGCAT GGCT TTGTT GGCC TTTTTACTTTCTTTT TERM 1417 1286423 - 1286440 + g 100 -9.9 -5.61824 | AGAAACTTGAATTGG CTGGTAG GTGT CTACCAG TTTTTTTAAATTTTG TERM 1418 1286703 - 1286733 + r 90 -11.2 -3.95988 | gap 1, overlap 1286698 GGAGTTATTCGCTTG GGGCGGTAC-GCC TACAGT GGCTGTACCGCTC TTGTCTTTACTTTTA Sde_1005 1287033 - 1286746 - | putative signal peptide protein TERM 1419 1286783 - 1286795 + g 74 -3.4 -5.02074 | overlap 1286775 TCTTGAGGCTTGAGG TTGC CGCCA GCAA TTTTTTCGCAGCTGC TERM 1420 1287270 - 1287242 - R 89 -11.7 -3.53224 | opp_overlap 1287243, overlap 1287243 CATGCGGGGGTGAAA GCGGTGCGAGC GCTATTG GCTCGCACCGT TATGATGTTAAAGGT TERM 1421 1287243 - 1287269 + r 100 -15.2 -3.52073 | opp_overlap 1287242 1287243 ATGCGGGGGTGAAAG CGGTGCGAGC GCTATTG GCTCGCACCG TTATGATGTTAAAGG TERM 1422 1287269 - 1287243 - R 100 -15.2 -2.71791 | opp_overlap 1287243, overlap 1287242 ATGCGGGGGTGAAAG CGGTGCGAGC GCTATTG GCTCGCACCG TTATGATGTTAAAGG Sde_1006 1288921 - 1287278 - | glucose-6-phosphate isomerase TERM 1423 1288109 - 1288088 - G 72 -8.7 -3.83502 | CATGCCGATAGCAAA CGCAATGGG CATA CCTATTGCG GACCAAAGTGAATAG TERM 1424 1288554 - 1288573 + g 80 -7.2 -4.5774 | CTTTTAATAAGTTTG GCCATTTT GTCT AAAGTGGC TTTTACTTCTTGGTG TERM 1425 1288652 - 1288679 + g 76 -2 -5.28778 | gap 1, overlap 1288655 TGGGCGATCTTCGGT GTTGTTTACGTGG TCG CCGCGCAAA-AGC TTTTTTATGGCTGCT Sde_1007 1290030 - 1289068 - | phage tail region protein TERM 1426 1289503 - 1289527 + g 71 -3.4 -4.87665 | overlap 1289503 TGCTGCTGTTTCACA GGCGGCTTCA AACAG TGCCGCCGTC TTTTTGTGAATAACC Sde_1008 1290439 - 1290750 + | 50S ribosomal protein L21P rpmA 1290773 - 1291030 + | 50S ribosomal protein L27 TERM 1427 1291058 - 1291081 + F 100 -11 -5.18371 | opp_overlap 1291058 TTTAGTTTCAAGAAA GCCCTGTTGC CTCG GTAGCAGGGC TTTTCTTTTATGGGA TERM 1428 1291081 - 1291058 - f 71 -6.6 -4.16842 | opp_overlap 1291058 TTTAGTTTCAAGAAA GCCCTGTTGC CTCG GTAGCAGGGC TTTTCTTTTATGGGA obgE 1291227 - 1292435 + | GTPase ObgE TERM 1429 1293117 - 1293127 + G 72 -8.2 -3.70037 | overlap 1293116 1293104 ATGATCAGCAAGGTG CGCG CGG CGCG TTTGGCTGCTCGTTC Sde_1011 1292448 - 1293569 + | gamma-glutamyl kinase TERM 1430 1293726 - 1293714 - g 71 -3.3 -4.74103 | opp_overlap 1293714 CCTGTAAGTGAAAAA GTGCA GCG TGCGC TTATTGATTACATAC Sde_1012 1293591 - 1294661 + | histidinol phosphate aminotransferase TERM 1431 1294712 - 1294763 + T 100 -36.4 -4.00124 | opp_overlap 1294712 1294730, overlap 1294730 TGTTAAGTGAAAAAA GCGATCAGACACAAAAAAGCCGAC TTTC GTCGGCTTTTTTGTGTCTGATCGC TTTGCTTCTACAGTG TERM 1432 1294763 - 1294712 - T 100 -36.4 -5.15969 | opp_overlap 1294712 1294730, overlap 1294730 TGTTAAGTGAAAAAA GCGATCAGACACAAAAAAGCCGAC TTTC GTCGGCTTTTTTGTGTCTGATCGC TTTGCTTCTACAGTG TERM 1433 1294730 - 1294745 + T 100 -10.4 -5.43414 | opp_overlap 1294712 1294730, overlap 1294712 ATCAGACACAAAAAA GCCGAC TTTC GTCGGC TTTTTTGTGTCTGAT TERM 1434 1294745 - 1294730 - T 100 -10.4 -5.43414 | opp_overlap 1294730 1294712, overlap 1294712 ATCAGACACAAAAAA GCCGAC TTTC GTCGGC TTTTTTGTGTCTGAT Sde_1013 1295076 - 1294810 - | SSU ribosomal protein S20P Sde_1014 1295551 - 1296969 + | arabinan endo-1,5-alpha-L-arabinosidase TERM 1435 1297014 - 1297050 + T 85 -9.5 -4.13304 | opp_overlap 1296967 1296966 1296976 1296990 1296995 1297016, overlap 1297015 1297018 TAACAGCTAACAGCT AACAGCTAACAGCGT TCAGCCT ACGCTGTTAGCTGCC TTTTACGGGTAATTT TERM 1436 1297015 - 1297049 + T 95 -13 -3.07259 | opp_overlap 1296967 1296966 1296976 1296990 1296995 1297016, overlap 1297014 1297018 AACAGCTAACAGCTA ACAGCTAACAGCGT TCAGCCT ACGCTGTTAGCTGC CTTTTACGGGTAATT TERM 1437 1297048 - 1297016 - T 100 -16.5 -3.19789 | opp_overlap 1297015 1297014 1297018, overlap 1296967 1296966 1296976 1296990 1296995 ACAGCTAACAGCTAA CAGCTAACAGCGT TCAGCCT ACGCTGTTAGCTG CCTTTTACGGGTAAT TERM 1438 1297018 - 1297046 + T 93 -13.3 -2.75081 | opp_overlap 1296967 1296966 1296976 1296990 1296995 1297016, overlap 1297015 1297014 AGCTAACAGCTAACA GCTAACAGCGT TCAGCCT ACGCTGTTAGC TGCCTTTTACGGGTA Sde_1015 1299114 - 1297042 - | sensor histidine kinase TERM 1439 1298013 - 1298029 + g 100 -12.3 -4.8543 | opp_overlap 1298013 GATCGGCAATGACAA CGCCCAA TGG TTGGGCG TTTTTATCACCGTTG TERM 1440 1298029 - 1298013 - G 88 -12.3 -3.51329 | opp_overlap 1298013 GATCGGCAATGACAA CGCCCAA TGG TTGGGCG TTTTTATCACCGTTG TERM 1441 1298073 - 1298085 + g 82 -6.9 -4.8048 | opp_overlap 1298073, overlap 1298065 CGGCAACGCGCAAAA GGCGT TTG GCGCC TTTTTGATATACGCC Sde_1016 1299832 - 1299140 - | response regulator receiver domain-containing protein TERM 1442 1299280 - 1299296 + g 72 -2.9 -5.08824 | overlap 1299268 CTACGTTGGCGGCAT CCATTAG CTG CTGACGG TTTTTTACATGGCCG TERM 1443 1299875 - 1299852 - R 100 -14.6 -3.34344 | overlap 1299823 CTACTCGGTAACTAA GCCCCTGTCG CAAG CAACAGGGGC ACACGGAAAGATTAA Sde_1017 1301173 - 1299887 - | glucose/galactose transporter TERM 1444 1300990 - 1300970 - G 78 -4.7 -5.02074 | opp_overlap 1300970 GTAGGCGCCAAAAAA GCAAAATTG GAT CAAACTTGC TTGGGTATAACTTAA TERM 1445 1301244 - 1301257 + H 82 -2.3 -5.60689 | overlap 1301227 1301225 GCCATTATGGTTTGG CGATG CTTT CCTCG TTTTTTATTGTGTGC TERM 1446 1301896 - 1301864 - g 71 -10.7 -2.59055 | gap 1, opp_overlap 1301895, overlap 1301863 1301867 1301879 1301882 TAAAGCCGGCACAAT GGACCCAAAA-GGC AACAAG GCCATTTTGGGCCC TGGCACTGGTTTAGG Sde_1018 1301478 - 1302443 + | glucokinase TERM 1447 1302428 - 1302438 + T 70 -5.4 -4.55485 | TGGTGCGGCTGCCTG GTTG GAT CAAC TTTAATTTTTTTATA TERM 1448 1302574 - 1302591 + T 100 -11.3 -5.45802 | CTTTTATAAAGTTTT GCCTAGC ATTT GCTAGGC TTTTTCTTTTAGCCA Sde_1019 1303455 - 1302586 - | hypothetical protein Sde_1020 1305263 - 1303494 - | glutathione-regulated potassium-efflux system protein Sde_1021 1305704 - 1305267 - | 3'-5' exoribonuclease, VacB and RNase II TERM 1449 1305309 - 1305324 + g 72 -3.2 -4.946 | opp_overlap 1305290 CAGAGCGTAACACAG CGCCTT GTCC AATGCG TTTTTACTATTTACT Sde_1022 1306068 - 1305736 - | RNA methyltransferase TrmH, group 3 TERM 1450 1306826 - 1306816 - g 71 -6.8 -4.1899 | GTAGTGGAGGCAAAA GCCA CAT TGGC AGCATTTGATGGCGA Sde_1023 1306216 - 1307121 + | hypothetical protein Sde_1024 1307978 - 1307097 - | ribosomal protein S6 TERM 1451 1307173 - 1307194 + g 72 -5.1 -4.64861 | gap 1, overlap 1307163 1307162 ATTAGTGCGCCGCCG CCA-AGCACC TGC GGTGCAATGG TTTCTTTTAGCACAA Sde_1025 1308169 - 1310433 + | ribosomal protein S18 TERM 1452 1310872 - 1310885 + G 81 -3.7 -5.31091 | ACCTTGGGTATTTCT GCCGC TGCT GCTGC TTTTCTTTTATTATC Sde_1026 1310734 - 1312302 + | ribosomal protein L9 TERM 1453 1312352 - 1312336 - f 82 -5 -5.27335 | opp_overlap 1312337, overlap 1312337 TCGCTTAAATAAAAA GCCGCC GTTTA GGCGGT TTTTTTATGGCTGTT TERM 1454 1312337 - 1312351 + F 100 -8.5 -5.65177 | opp_overlap 1312336 1312337 CGCTTAAATAAAAAG CCGCC GTTTA GGCGG TTTTTTTATGGCTGT TERM 1455 1312351 - 1312337 - f 75 -8.5 -3.75678 | opp_overlap 1312337, overlap 1312336 CGCTTAAATAAAAAG CCGCC GTTTA GGCGG TTTTTTTATGGCTGT TERM 1456 1312906 - 1312924 + G 87 -7.3 -5.24129 | TTTGCATCTTTTCGG CCCGCCC GAGCA GGGCAGG TTTTTTCTAACGGCG Sde_1027 1312573 - 1312956 + | DnaB helicase Sde_1028 1316120 - 1313031 - | pantoate-beta-alanine ligase TERM 1457 1316315 - 1316298 - R 78 -9.8 -3.53444 | TTAGGGTCGGGCAAA CGGGGC GTCCTT GCCCCG TCAGCCCTTAAGCGC TERM 1458 1316421 - 1316431 + r 75 -3.2 -5.21236 | TTGTGTTTTTAAATG CACG TTT TGTG TTTTTCTTGTCAGTT TERM 1459 1316564 - 1316581 + r 78 -9.8 -3.53012 | GCGTTTAAGGGCTGA CGGGGC AAGGAC GCCCCG TTTGCCCGACCCCGA TERM 1460 1316707 - 1316684 - R 71 -4.4 -4.90778 | overlap 1316688 1316698 TGCACGCAAAGAAAA GTGACTCGCC AACA GGCGAAACCC CAACCTAAAAAAGAA Sde_1029 1318372 - 1316747 - | aspartate decarboxylase TERM 1461 1317230 - 1317249 + g 77 -3.6 -5.22137 | gap 1, overlap 1317238 CTCTAGTTCTAGTAT GTCTA-CCT CAA AGGCTAGGC TTTTGTTTTCTAATT TERM 1462 1317238 - 1317254 + g 80 -7.3 -4.55491 | overlap 1317230 CTAGTATGTCTACCT CAAAGGC TAG GCTTTTG TTTTCTAATTGAATA TERM 1463 1317375 - 1317387 + g 70 -4.9 -4.45068 | overlap 1317371 TCGAATAGATGCCAA TACAA GCG TTGTA TTTGTTGTTGGCGGT TERM 1464 1317777 - 1317764 - G 71 -3.7 -4.8622 | opp_overlap 1317766, overlap 1317765 1317766 TTGTTCAATGAAAAA TGCGC GGCA GCGCT CTGCGGTGTTTACTG TERM 1465 1318319 - 1318330 + g 76 -2.2 -5.41746 | AAGTTGTAGTGCTAG CCAT AGTT GTGG TTTTTTTCGCGGCTT Sde_1030 1319278 - 1318376 - | GGDEF TERM 1466 1319098 - 1319124 + g 70 -5.1 -4.5442 | gap 1, overlap 1319101 GTAGCAGCGGGTCTA GTGCGCTGTGCC CCGT GGCG-AGCGTGC TTTTGTGATTAAACG Sde_1031 1320235 - 1319480 - | putative metabolite transport protein CsbC TERM 1467 1319801 - 1319779 - G 70 -2 -5.05116 | overlap 1319781 CTACAAATAATAAAA TACCAAACAA AAA TAATTTGGCA TTAAACTGAATCGCA Sde_1032 1321029 - 1320352 - | putative transmembrane sugar transporter TERM 1468 1321011 - 1320976 - G 72 -2.6 -4.92828 | gap 1 AAACCCAAAAATAAA TCCACCTAGTGCTACAC ACA ATGCAACACG-GGTAGA TACAGAAATTGTTGC Sde_1033 1323032 - 1321308 - | putative oxidoreductase chain TERM 1469 1321924 - 1321934 + g 74 -8.2 -4.00038 | opp_overlap 1321915 ATAATAGGGCCTGTT GGGC GCT GCCC TTTGTAGTAGTCATC TERM 1470 1322387 - 1322414 + g 95 -2.8 -5.81412 | gap 1, opp_overlap 1322376, overlap 1322389 ATAAGTGCGCACAGC GACCCT-GTATGA ATT TCATATGAGGGTA TTTTTTTTCGATAGC TERM 1471 1322389 - 1322412 + g 72 -5.4 -4.5536 | gap 1, overlap 1322387 AAGTGCGCACAGCGA CCCT-GTATGA ATT TCATATGAGGG TATTTTTTTTCGATA Sde_1034 1323725 - 1323087 - | acetate--CoA ligase Sde_1035 1324522 - 1323926 - | hypothetical protein TERM 1472 1324242 - 1324271 + g 71 -7.9 -3.90092 | GTGCTATCACTGCCC CAGCTGTTCTCTA CGTC TTGAGAAAAGCTG TTGTTATCTGAATAT TERM 1473 1324905 - 1324892 - H 74 -6.7 -4.25848 | opp_overlap 1324891 1324895 1324899, overlap 1324895 AATGCTTGATCAAAA TGACG TGTG CGTCA CGTATTATTGATCTG Sde_1036 1325056 - 1325625 + | hypothetical protein TERM 1474 1326036 - 1326021 - g 76 -4.7 -4.84033 | ATACAAAAATCAAAA CAGTG TTACAG CACTG GATGCCCCCCTAGAA Sde_1037 1325713 - 1326723 + | Smr protein/MutS2-like Sde_1038 1326736 - 1328148 + | hypothetical protein Sde_1039 1328196 - 1328630 + | hypothetical protein TERM 1475 1328616 - 1328643 + F 72 -10 -2.78547 | opp_overlap 1328616, overlap 1328613 CACGAAGGGTTAGAA CTGCAAAACG AGTAAATC CGTTTTGCAG TAATTAATAACCTAA TERM 1476 1328643 - 1328616 - f 81 -10.7 -3.33737 | opp_overlap 1328616 1328613 CACGAAGGGTTAGAA CTGCAAAACGA GTAAAT CCGTTTTGCAG TAATTAATAACCTAA Sde_1040 1328698 - 1329144 + | phospholipid/glycerol acyltransferase Sde_1041 1329314 - 1329979 + | hypothetical protein TERM 1477 1330840 - 1330825 - g 76 -4.6 -4.99861 | overlap 1330816 GATGAAGCACAAAAA TGGGCG GATG CGCGCA GGCTGTATTCACAAA TERM 1478 1330871 - 1330860 - g 80 -7.2 -4.57482 | GTATTCACAAATAAA CCGC ATAA GCGG CAGTGTAAAAACTGA TERM 1479 1331098 - 1331108 + G 79 -8.2 -4.22375 | overlap 1331104 AATGTAAACGTCACT CCCG CTG CGGG TTTATTGCCTGCTGT Sde_1042 1330054 - 1331751 + | phosphoserine phosphatase SerB TERM 1480 1331826 - 1331814 - g 72 -9.1 -3.48593 | overlap 1331817 GAGTTGGCGACACAA CCACC CAC GGTGG AACCATTGTAGGCCC Sde_1043 1331783 - 1332061 + | hypothetical protein Sde_1044 1332066 - 1332503 + | tail lysozyme, putative TERM 1481 1335203 - 1335193 - g 74 -5.4 -4.72007 | overlap 1335197 GCTTAGCAAAATAAA GCAA CAC TTGC AGGCACTTGGGCCAA Sde_1045 1332518 - 1335586 + | hypothetical protein TERM 1482 1335975 - 1335961 - g 78 -6.4 -4.56597 | opp_overlap 1335961 GCGTGGCTGCAAAAA GCAGAG CAA CTCTAC TTTTTAAATAAACCT TERM 1483 1336628 - 1336604 - g 76 -2.1 -5.35354 | overlap 1336607 1336608 TAGATAACGAAAAAA CAAGGCTTATA TTC TACAAGCGTGG TATGCCCATAAGCGC Sde_1046 1335598 - 1338285 + | response regulator receiver /GGDEF/PAS/PAC domain-containing protein TERM 1484 1339100 - 1339112 + G 75 -2.6 -5.10461 | ATTGCCTACCCTTTG GTCG AATTG CGGC TTTTTATTCGATAAA TERM 1485 1340864 - 1340848 - g 72 -5.1 -4.73105 | AGTTAGAAAAAACAA CTCTTCC ACC GCAAGAG CGCGATGAGCTGGTG Sde_1047 1338363 - 1341140 + | hypothetical protein TERM 1486 1341220 - 1341238 + G 76 -8.8 -3.69605 | opp_overlap 1341217 1341216 1341224, overlap 1341217 1341236 CACCAATAACACGCA GCAAGCAC TTG GTGCTCGC TTACTTTTGCGTGAG Sde_1048 1341143 - 1342681 + | hypothetical protein Sde_1049 1342732 - 1344030 + | elongation factor P TERM 1487 1344537 - 1344522 - g 75 -6.2 -4.41494 | overlap 1344527 GAGCTTCAACGAAAA GAAGAT GAAA ATCTTC AGCGTAAGGAAGATA TERM 1488 1344798 - 1344815 + G 71 -7.7 -3.85698 | overlap 1344772 GGTGGTGACCCATTG CCGCTTT CCGT AAGGCGG TTTATGGAACCCAGA TERM 1489 1345889 - 1345907 + G 75 -9.6 -3.60074 | TGTGCCCGGCGCGTT TATGCGTG TGG CACGCGTA TTTGGCAGCTTTATA Sde_1050 1344090 - 1347830 + | hypothetical protein TERM 1490 1348630 - 1348618 - g 75 -2.7 -5.2197 | overlap 1348619 GATAAAAATGAAAAA CGTAT TTA ATACA CAAAAAACCAAGCGG TERM 1491 1349190 - 1349220 + G 78 -12.6 -2.53911 | CTTCTAGCTCATCGT CTTCGTCCACCAGT TCA ACTGGTGGAAGTAG TGAGTTAACCATTCA Sde_1051 1348610 - 1350712 + | Serine O-acetyltransferase TERM 1492 1350757 - 1350742 - T 77 -10.4 -3.1505 | opp_overlap 1350742 AGCAGCGTTCACTAA GGCACC TCCG GGTGCC TTTTTTATATATGTA TERM 1493 1350742 - 1350757 + T 100 -10.4 -5.4492 | opp_overlap 1350742 AGCAGCGTTCACTAA GGCACC TCCG GGTGCC TTTTTTATATATGTA Sde_1052 1351985 - 1350984 - | hypothetical protein TERM 1494 1352157 - 1352179 + G 79 -11.3 -3.46824 | opp_overlap 1352157 GGTGGAAACAAAAAA GGCAGAGCT TTTTT GGCTCTGCC TTCATTAATTGGTGC TERM 1495 1352179 - 1352157 - g 100 -10.6 -5.63517 | opp_overlap 1352157 GGTGGAAACAAAAAA GGCAGAGC TTTTTTG GCTCTGCC TTCATTAATTGGTGC TERM 1496 1352289 - 1352311 + G 79 -11.3 -3.46824 | opp_overlap 1352289 GCGGAAACGAAAAAA GGCAGAGCT TTTTT GGCTCTGCC TTCATTAATTGGTGC TERM 1497 1352311 - 1352289 - g 100 -10.6 -5.37593 | opp_overlap 1352289 GCGGAAACGAAAAAA GGCAGAGC TTTTTTG GCTCTGCC TTCATTAATTGGTGC TERM 1498 1352442 - 1352421 - g 100 -5.8 -5.95539 | opp_overlap 1352421, overlap 1352423 GCGGAAATAAAAAAA GGCAGAGC TGTTTG GCTCTGTC TTCATTAATTGGTGC Sde_1053 1352105 - 1352518 + | hypothetical protein TERM 1499 1352551 - 1352572 + F 100 -12.3 -3.46824 | opp_overlap 1352551 GGCGGAAATAAAAAA GGCAGAGCT GTTT GGCTCTGCC TTCATTAATTGGTGC TERM 1500 1352572 - 1352551 - f 100 -11.6 -5.63517 | opp_overlap 1352551 GGCGGAAATAAAAAA GGCAGAGC TGTTTG GCTCTGCC TTCATTAATTGGTGC TERM 1501 1352681 - 1352702 + F 100 -12.3 -3.46824 | opp_overlap 1352681 GGCGGAAATAAAAAA GGCAGAGCT GTTT GGCTCTGCC TTCATTAATTGGTGC TERM 1502 1352702 - 1352681 - f 100 -11.6 -5.63517 | opp_overlap 1352681 GGCGGAAATAAAAAA GGCAGAGC TGTTTG GCTCTGCC TTCATTAATTGGTGC TERM 1503 1353008 - 1353021 + F 73 -3.8 -5.07971 | overlap 1352991 ACTTTAAGCGCACAG CGCA AACAGG TGCG TTTTTGATTCTTTTC TERM 1504 1355440 - 1355430 - g 76 -4.6 -5.02074 | GCACCTGTTAAAAAA GCGA GTG CCGC TAGCCGTATAATAGC TERM 1505 1355496 - 1355468 - g 72 -3 -5.00884 | overlap 1355481 AGCCGGTGTAAAAAA TGCTGCTGCAAA CTTGC TTGGCCGCGGCA AAGCTAAAAAAGCCG TERM 1506 1355704 - 1355676 - g 74 -3.7 -5.0538 | GCGCAGCCCAAAAAA GGGGCTAAAGGCG AAG CATCCTCAGCGCC AAAGACTCGCGGGGC TERM 1507 1355815 - 1355801 - g 72 -2.8 -4.91473 | TAAGGCAAAAACAAA GCCT GCTGCTA AGGC TCGCACCACCAAAAA Sde_1054 1353057 - 1355870 + | RNAse R Sde_1055 1355883 - 1356629 + | tyrosyl-tRNA synthetase, class Ib Sde_1056 1356746 - 1357564 + | hypothetical protein Sde_1057 1357706 - 1358164 + | SSU ribosomal protein S6P rpsR 1358167 - 1358394 + | 30S ribosomal protein S18 Sde_1059 1358504 - 1358962 + | LSU ribosomal protein L9P / transcriptional regulator GntR family protein TERM 1508 1359015 - 1359055 + F 100 -12.8 -4.35524 | gap 1, opp_overlap 1359014 1359015 ATTAGCCGTTAGAAT TGGGCGCTTGATTGGAGTT GAAT AACTCTAG-CAAGTGCCCA TTTTGCGTTTAGGGG Sde_1060 1359158 - 1360624 + | primary replicative DNA helicase Sde_1061 1360663 - 1361517 + | pantothenate synthetase Sde_1062 1361611 - 1361991 + | aspartate 1-decarboxylase TERM 1509 1362023 - 1362042 + T 100 -8.5 -5.27938 | opp_overlap 1362023 GTGTGTGCTTTAAAA GGGTCGC TTTACT GCGGCCC TTTTTGTTTAGCGCT Sde_1063 1363386 - 1362031 - | GGDEF family protein TERM 1510 1364850 - 1364810 - g 85 -12.7 -3.34029 | gap 1, opp_overlap 1364810 TAAATACCCTTACAA GCGCGCCATGCTTCCTGT TGCTCG ACTGGAAG-ATGGCACGC TTTGGCATTGGTAGT TERM 1511 1364810 - 1364850 + G 86 -11.2 -3.68244 | gap 1, opp_overlap 1364810 TAAATACCCTTACAA GCGCGCCATGCTTCCTGTT GCTC GACTGGAAG-ATGGCACGC TTTGGCATTGGTAGT Sde_1064 1363656 - 1364864 + | galactokinase Sde_1065 1365795 - 1364896 - | galactose-1-phosphate uridyl transferase, class I TERM 1512 1366026 - 1365993 - H 79 -11.1 -3.07254 | gap 1, opp_overlap 1365993 1365990, overlap 1365990 1366001 AAAGAGGAGAAAGGA TTA-GCCAAGCAGCGC ACA GCGCTACTAGGCATAA TAATTTGGGTGCAAA TERM 1513 1366017 - 1366001 - H 74 -10.1 -3.12402 | opp_overlap 1365993 1365990, overlap 1365993 1365990 GAAAGGATTAGCCAA GCAGCGC ACA GCGCTAC TAGGCATAATAATTT Sde_1066 1366085 - 1366900 + | GGDEF TERM 1514 1366950 - 1366933 - f 76 -10.5 -3.00022 | opp_overlap 1366933 CTCATGTTATACACA GGCGGCC AAAG AGCCGCC TTTTAGTGTAAATAA TERM 1515 1366933 - 1366950 + F 93 -9.8 -4.3586 | opp_overlap 1366933 CTCATGTTATACACA GGCGGC CAAAGA GCCGCC TTTTAGTGTAAATAA TERM 1516 1366984 - 1366970 - f 89 -3.6 -5.64421 | overlap 1366980 AGTGTAAATAAAAAA GATAAT TCA ACTATC TGCATAGCTGTCAAC Sde_1067 1367106 - 1369043 + | acetyl-coenzyme A synthetase TERM 1517 1369185 - 1369169 - f 81 -7.3 -4.62336 | AGTTCAGGTTAAAAA GCTCAAT GTT ACTGAGC CTGGAGAGTAAATTG Sde_1068 1369174 - 1369662 + | TonB-dependent receptor TERM 1518 1369672 - 1369708 + F 80 -10.5 -3.53787 | gap 1, opp_overlap 1369679, overlap 1369674 CACTAATATTTTTAG C-ATTAGACGAAAAAG CTAAGC CTTTTTCGTCTAATCG TTCTACGTTTTACTT TERM 1519 1369674 - 1369705 + F 93 -13.3 -2.89068 | opp_overlap 1369679, overlap 1369672 CTAATATTTTTAGCA TTAGACGAAAAAG CTAAGC CTTTTTCGTCTAA TCGTTCTACGTTTTA Sde_1069 1369940 - 1371304 + | decarboxylase family protein Sde_1070 1371340 - 1371912 + | transcription factor jumonji, jmjC TERM 1520 1372298 - 1372312 + G 73 -10 -3.40522 | ATTAATCATTTGGCT GCTGCT AGT AGCAGC TTATAGTAAGGGCGT Sde_1071 1371915 - 1372334 + | hypothetical protein Sde_1072 1372331 - 1372942 + | hypothetical protein TERM 1521 1372952 - 1372984 + T 100 -8.5 -5.2204 | gap 1, opp_overlap 1372952 AAGTAATGTCGTAAA TGTGGCTGCGCGAA CTCGTC TTC-CGCTGCCACA TTTTTCTTAATTCTC TERM 1522 1372984 - 1372952 - T 73 -8.5 -3.58305 | gap 1, opp_overlap 1372952 AAGTAATGTCGTAAA TGTGGCTGCGCGAA CTCGTC TTC-CGCTGCCACA TTTTTCTTAATTCTC Sde_1073 1374787 - 1373072 - | DNA polymerase III, alpha subunit TERM 1523 1374264 - 1374251 - G 78 -5.9 -4.88222 | AGCAAAATGTAAAAA GCCGG GCAG CCAGC GAGAATCGCGCACAC Sde_1074 1376164 - 1375025 - | Acetyl-CoA carboxylase, alpha subunit TERM 1524 1377392 - 1377366 - g 74 -10.8 -3.272 | ATTAGCCTAGAGCAA GTTGTCGCAGTC GGC GACGGCGCCAAC GACCTGCCCATGTTG Sde_1075 1376328 - 1377545 + | methyl-accepting chemotaxis sensory transducer / phosphoserine phosphatase Sde_1076 1377576 - 1377983 + | ATP-dependent helicase HrpA TERM 1525 1378289 - 1378319 + G 73 -4.1 -4.73614 | opp_overlap 1378290, overlap 1378290 1378297 GAAGCTTGGCGAAGA ATGTTAACTTCTG TTGAT CAGAATTTAACAC TTTCTTTTGGTGCTC Sde_1077 1378007 - 1378984 + | Type II secretory pathway component PulF-like Sde_1078 1378984 - 1379472 + | pilin TERM 1526 1379512 - 1379542 + T 86 -9.1 -4.27681 | opp_overlap 1379518, overlap 1379518 TTTAATGTCTGTAAC CAAAAAGGGCTGT ATAAC GCAGCCCTTTTTA TGTTTTTTAATTAAT TERM 1527 1379518 - 1379536 + T 100 -8.1 -5.41787 | opp_overlap 1379518, overlap 1379512 GTCTGTAACCAAAAA GGGCTGT ATAAC GCAGCCC TTTTTATGTTTTTTA TERM 1528 1379536 - 1379518 - T 85 -7.4 -4.8622 | opp_overlap 1379518 1379512 GTCTGTAACCAAAAA GGGCTG TATAACG CAGCCC TTTTTATGTTTTTTA Sde_1079 1381646 - 1379562 - | diguanylate cyclase/phosphodiesterase TERM 1529 1381026 - 1381037 + g 72 -3 -5.00616 | GCCTTTTAAGGTGAA TTCT TTTA AGAA TTTTTTAACAGCGGC Sde_1080 1383612 - 1381867 - | hypothetical protein Sde_1081 1384741 - 1383701 - | L-lysine 2,3-aminomutase Sde_1082 1384933 - 1385502 + | translation elongation factor P (EF-P) TERM 1530 1385541 - 1385524 - f 100 -14.1 -3.15544 | opp_overlap 1385524 CGCTAGCGTTACTAA CGGGGCC TTCT GGCCCCG TTTTCAATTGTGCAA TERM 1531 1385524 - 1385541 + F 100 -14.1 -4.3208 | opp_overlap 1385524 CGCTAGCGTTACTAA CGGGGCC TTCT GGCCCCG TTTTCAATTGTGCAA TERM 1532 1385636 - 1385614 - g 83 -9.1 -4.32201 | opp_overlap 1385614 1385627 GCAATTAATTTAAAA GCGCGCAGT GCATT ATTGCGCGC TATTCGCGAATATTT TERM 1533 1385614 - 1385636 + G 78 -12 -3.04515 | opp_overlap 1385614, overlap 1385627 GCAATTAATTTAAAA GCGCGCAGTG CAT TATTGCGCGC TATTCGCGAATATTT TERM 1534 1385986 - 1385970 - g 74 -3.6 -5.08824 | TGGCTATGTAAAAAA CCAGCT TGCAG AGCAGG GGGCGGTTGTAGCCA Sde_1083 1385578 - 1386555 + | serine/threonine protein kinase TERM 1535 1386584 - 1386557 - T 100 -17.2 -3.75153 | opp_overlap 1386562, overlap 1386562 CTGCTCCAAGCTAAA TTAAAGCGCGGT AGCA ACCGCGCTTTAA CTGCTAATCATTTAC TERM 1536 1386562 - 1386579 + T 100 -12.7 -3.69323 | opp_overlap 1386557 1386562 CCAAGCTAAATTAAA GCGCGGT AGCA ACCGCGC TTTAACTGCTAATCA TERM 1537 1386579 - 1386562 - T 100 -12.7 -4.10672 | opp_overlap 1386562, overlap 1386557 CCAAGCTAAATTAAA GCGCGGT AGCA ACCGCGC TTTAACTGCTAATCA Sde_1084 1387429 - 1386596 - | Serine O-acetyltransferase Sde_1085 1387499 - 1388152 + | hypothetical protein anmK 1389340 - 1388225 - | anhydro-N-acetylmuramic acid kinase Sde_1087 1390736 - 1389354 - | 3'-5' exoribonuclease, VacB and RNase II TERM 1538 1389441 - 1389456 + g 73 -7.6 -4.07568 | overlap 1389426 CTCAAGTTCCGCTAT CCAAAC TTGG GTTTGG TTTTGGAAGCGCGCC TERM 1539 1390661 - 1390651 - G 76 -8.2 -4.18019 | AGAACCACAGATAAA GCCG CAA CGGC TATAAAGTGCGCGCG Sde_1088 1390931 - 1392235 + | tyrosyl-tRNA synthetase Sde_1089 1394188 - 1392341 - | Signal transduction histidine kinase-like TERM 1540 1393697 - 1393685 - G 74 -3.3 -5.08601 | TGATGTTAAGAAAAA CGCGT AGA AAGCG GGTGCGTAAGCATAG Sde_1090 1394429 - 1395991 + | sodium/glucose cotransport protein TERM 1541 1396025 - 1396042 + F 100 -12.7 -5.4433 | TAGTATTAATTTCAG CGGCACC TTCG GGTGCCG TTTTTATTTCTGTAT TERM 1542 1396894 - 1396906 + G 70 -9.1 -3.30474 | TTGCTTAAAGGCGGA GCCAC ATC GTGGC TTGGTGATTATCAAC TERM 1543 1397268 - 1397238 - g 79 -9.1 -4.13767 | gap 1 TTTTGGAGCCTAAAA GGGTTGTGCAGC GGCTGCTT GC-GCACAACCC AGGGAATGTGAACCT Sde_1091 1396166 - 1397326 + | ATPase Sde_1092 1398050 - 1397334 - | GntR family transcriptional regulator TERM 1544 1400226 - 1400212 - g 79 -2.8 -5.40072 | CTCGTGTTAAAAAAA CCAATA CCT TAGTGG AAGACTTCTCTATTA Sde_1093 1398972 - 1402448 + | TonB-dependent receptor TERM 1545 1402475 - 1402498 + F 100 -9.6 -5.9873 | opp_overlap 1402475 TACAAAGCTAAGTAA TGCGCATAGT GAAA GCTGTGCGCA TTTTTTTTGTGCTAA TERM 1546 1403052 - 1403071 + G 79 -10.8 -3.5936 | TACGGTGCATACTCT TTTGCTGC GGTT GCAGCAAA TTTAAAACGTTTCGG TERM 1547 1403652 - 1403642 - g 85 -5.4 -5.41746 | opp_overlap 1403642 AAGTTGGGAAAAAAA TTGC GTG GCAA TAGGTTTGTCAGCGG TERM 1548 1403977 - 1403994 + G 72 -5.5 -4.41348 | overlap 1403975 1403974 ATGGGTTGTTTATGC CTGCTAG TTGG CTGGCGG TTTATTTGGGACAGG TERM 1549 1404119 - 1404131 + G 79 -7.7 -4.43397 | opp_overlap 1404119 GGCTGTAGAAAGGTA CGAGT CTC ACTCG TTGTTTGTTTTGAGG Sde_1094 1402665 - 1404212 + | allophanate hydrolase subunit 2 Sde_1095 1404209 - 1405612 + | hypothetical protein TERM 1550 1406963 - 1406987 + G 71 -7.2 -4.02979 | overlap 1406959 TGATGTTGGGGCAGG GGATTATGCC GTCGG GGTATAGTCC TTTGGTTGATGTTTT Sde_1096 1405618 - 1407114 + | tryptophan halogenase, putative Sde_1097 1408315 - 1407158 - | galactokinase TERM 1551 1407483 - 1407497 + g 76 -5 -4.79752 | overlap 1407480 AGCGCTTCCGCTGCG TCAATG GTG CGTTGA TTTTCTGTTATTACA Sde_1098 1409374 - 1408322 - | galactose-1-phosphate uridylyltransferase Sde_1099 1411556 - 1412728 + | response regulator receiver domain-containing protein Sde_1100 1413795 - 1412734 - | lipopolysaccharide heptosyltransferase-1, putative TERM 1552 1415492 - 1415478 - H 75 -5.7 -4.67011 | overlap 1415465 AAGGGGAGTGAAAAA CTTCC CCGCC GGAAG ATCAAGGTTTCCTGT TERM 1553 1417258 - 1417242 - H 71 -9.3 -3.01204 | opp_overlap 1417257 AAAAGGATAAGTACA CCGACGC AAA GCGACGG GCGAGTACCTCAACC TERM 1554 1417593 - 1417568 - H 100 -13.3 -4.4261 | opp_overlap 1417568 CTTCTAATATCAAAA GCCCGTTTAGG TTAT CCTAAGCGGGC TTTTTTGTGATCGGT TERM 1555 1417568 - 1417593 + H 100 -15.5 -5.31877 | opp_overlap 1417568 CTTCTAATATCAAAA GCCCGTTTAGG TTAT CCTAAGCGGGC TTTTTTGTGATCGGT TERM 1556 1419036 - 1419024 - H 76 -2.7 -5.35224 | opp_overlap 1419032 GCTATAAAAAGAAAA TCAAG GTT CTTAA TCTGTTAAGTTTTAA Sde_1101 1419370 - 1422405 + | TonB-dependent receptor TERM 1557 1422452 - 1422433 - f 72 -9.2 -3.18199 | opp_overlap 1422433 TAACTTTTAAGTCAA GGCCGCTG CTTG CAGTGGCC TTTTTTGTTTCTGGC TERM 1558 1422433 - 1422452 + F 100 -11.4 -5.72622 | opp_overlap 1422433 TAACTTTTAAGTCAA GGCCGCTG CTTG CAGTGGCC TTTTTTGTTTCTGGC TERM 1559 1422675 - 1422707 + G 74 -3.3 -4.96501 | AGGTAAGTTCTTTCT TTCTGCCCTGCTCGG TTT TCAAGAGGGGGAGAA TTTATTTTTGTCGGA Sde_1102 1422496 - 1423203 + | SapC related protein Sde_1103 1423228 - 1424235 + | Pass1-related protein TERM 1560 1425765 - 1425752 - g 100 -2.4 -6.36459 | opp_overlap 1425752 TTTAAGAAAAAAAAA CACT ATAGAA AGTG TTAAGTTTTCATTTA Sde_1104 1424247 - 1426469 + | hypothetical protein TERM 1561 1426830 - 1426861 + G 73 -7.4 -4.07562 | TCGTATCATCATCCT TTCACTTTGCCTGT AGGA ATGGGGAAAGTGAA TTTATATGCCGTTTG TERM 1562 1427540 - 1427525 - g 72 -4.8 -4.64844 | opp_overlap 1427525, overlap 1427520 GGGATACAGAGAAAA GTTTTT TCAT AAAAAC TGTGTGGCAATAGGG Sde_1105 1426533 - 1428086 + | ATPase TERM 1563 1428456 - 1428483 + G 80 -12.2 -3.03338 | gap 1 CTATTTTTACGCTAC TTGCGATGAACCC CGA GGGTT-ATCGCAA TATTACCGAGCTTAT TERM 1564 1428937 - 1428921 - g 71 -3.7 -4.77216 | AACAATACTTAAAAA CTGCA GAAGAAA TGCAG GAGTTGTTTAGTGAT TERM 1565 1428992 - 1429021 + G 74 -10.9 -2.79098 | gap 1, overlap 1428991 GTAGAAATTGCCAAG CGCTGCTCAATTGA AAT TCAATTGGGCA-CG TACTTCCTGCCTGAA TERM 1566 1430855 - 1430831 - g 79 -7.8 -4.49531 | opp_overlap 1430852, overlap 1430832 AAGAAAATCAACAAA CGCGCCCTAG AAGCG CTAGTGCGCA GTGGTGCGTTGGATA dnaE 1428200 - 1431721 + | DNA polymerase III subunit alpha TERM 1567 1432620 - 1432608 - g 72 -4.7 -4.61527 | overlap 1432609 AAAACCGTCGAAAAA GCGCC CTT GGCGG CAGAAGCTATGGGGG Sde_1107 1431888 - 1432844 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 1568 1432852 - 1432889 + F 82 -2 -5.64873 | gap 2, overlap 1432858 1432860 1432861 CAGTTTAATCCCCCC GTATTAGTAGGCACTGCC GCGT GGCAGTGCC-GCTT-TCC TTTTTTCTTATTAAA TERM 1569 1432858 - 1432884 + F 100 -10.9 -4.51301 | gap 1, overlap 1432852 1432860 1432861 AATCCCCCCGTATTA GTAGGCACTGCC GCGT GGCAGTGCC-GC TTTCCTTTTTTCTTA TERM 1570 1432860 - 1432883 + F 95 -12.4 -3.2834 | overlap 1432858 1432852 1432861 TCCCCCCGTATTAGT AGGCACTGCC GCGT GGCAGTGCCG CTTTCCTTTTTTCTT TERM 1571 1432861 - 1432882 + F 100 -15.9 -2.54564 | overlap 1432860 1432858 1432852 CCCCCCGTATTAGTA GGCACTGCC GCGT GGCAGTGCC GCTTTCCTTTTTTCT Sde_1108 1432992 - 1434611 + | putative methyl-accepting chemotaxis sensory transducer TERM 1572 1435932 - 1435897 - g 79 -12 -3.18634 | gap 1, overlap 1435895 1435893 1435892 GCGAACAAAAGTAGA GCGCTTACCGGTAGAAA ATA TTTCT-CAGGCAAGCGC CAATCAACGTAAAGG TERM 1573 1436580 - 1436562 - g 100 -6 -6.02345 | TAACCATAAAAAAAA TGGGTTTC AAA GAAAACCA AGAGCCAGCGAGTTA TERM 1574 1437488 - 1437470 - g 89 -11 -4.07687 | ATTGCTTTGGTAAAA GCTCTGCC TAA GGCAAAGC GCAAAAAAGTTGTTC Sde_1109 1434761 - 1438651 + | ATP-dependent helicase HrpA TERM 1575 1438893 - 1438907 + G 72 -8.6 -3.81287 | opp_overlap 1438885 CTAGAAGGCTTTAAC CGCAAA ATG TTTGCG TTTAATGATACTGTC Sde_1110 1438734 - 1439510 + | surface lipoprotein-like Sde_1111 1439921 - 1439601 - | hypothetical protein TERM 1576 1439691 - 1439733 + g 77 -9.3 -3.91911 | overlap 1439693 ACGCGCTACTTTGGT TTTTGCT-CGCAGCATTGGGC TGT GCCC-GTGTTGCGAAGCAATA TTTACTTCAAGTAGC TERM 1577 1439693 - 1439731 + g 86 -11.9 -3.5486 | overlap 1439691 GCGCTACTTTGGTTT TTGCT-CGCAGCATTGGGC TGT GCCC-GTGTTGCGAAGCAA TATTTACTTCAAGTA TERM 1578 1441292 - 1441309 + G 77 -6.9 -4.46615 | overlap 1441291 GTGCAGAGTATTCAG CTGCCGC TACA GCAGCAG TTTTCGTTGGTGGTG Sde_1112 1440314 - 1441513 + | response regulator receiver domain-containing protein Sde_1113 1441510 - 1442001 + | hypothetical protein Sde_1114 1442018 - 1442647 + | hypothetical protein TERM 1579 1442667 - 1442695 + F 100 -13.9 -3.09208 | opp_overlap 1442679 CCTCTCTCCTTTTGC ACTGCGCTAAACC CAA GGTTTGGCGCAGC TTCCCTCCATCCTTT Sde_1115 1442829 - 1443182 + | ATPase Sde_1116 1443224 - 1445686 + | Serine/threonine protein kinase-like Sde_1117 1445728 - 1446078 + | FHA domain-containing protein TERM 1580 1446232 - 1446260 + T 100 -15.4 -5.67283 | opp_overlap 1446232 GCCCTAAACTAAAAA GCCTGCTACCTA ATAAA TAGGTGGCAGGC TTTTTTATTTGCATT TERM 1581 1446260 - 1446232 - T 100 -13.2 -4.98531 | opp_overlap 1446232 GCCCTAAACTAAAAA GCCTGCTACCTA ATAAA TAGGTGGCAGGC TTTTTTATTTGCATT Sde_1118 1449441 - 1446310 - | AcrB/AcrD/AcrF family protein TERM 1582 1447393 - 1447407 + g 81 -4.9 -5.10208 | CGGGAATGCAAACTG GCCGC TCATT GTGGC TTTTTGTTGCAGTTC TERM 1583 1447727 - 1447713 - G 73 -4.3 -4.77036 | opp_overlap 1447713 CGGCAGCAGCAAAAA TGGAT GCTTG ATCCA TTGTTGAGCTAGCAG Sde_1119 1450635 - 1449526 - | RND family efflux transporter MFP subunit TERM 1584 1450138 - 1450121 - G 72 -8.3 -3.76641 | opp_overlap 1450110 ATGCGAATACCTAAA CGCCCCG CAAA CGGTGCG GTAATGGTTTTCTTT TERM 1585 1450308 - 1450295 - G 73 -9.5 -3.34609 | opp_overlap 1450289, overlap 1450293 1450289 TTAGCTAAAGCAACA GCGGC TTCG GCCGC GCGCAGTTGCGCTTT TERM 1586 1450309 - 1450320 + g 80 -7.2 -4.63928 | opp_overlap 1450289, overlap 1450289 1450308 AGCGGCTTCGGCCGC GCGC AGTT GCGC TTTTTCGGATGATAT TERM 1587 1450964 - 1450981 + r 80 -4.9 -5.1356 | gap 1, opp_overlap 1450964 GTCAGGAGAGACTAA CG-CGTAT GCG ATACGGCG TTTTTCTTGGTCAAC Sde_1120 1452880 - 1450940 - | RNAse R TERM 1588 1451932 - 1451909 - G 72 -5.3 -4.56597 | opp_overlap 1451908 1451903 1451909 GGTGCCCTCTAAAAA CTCAGCTAC TTGTTG GTAGTTGAG CTTGTATTTAGATTG TERM 1589 1452651 - 1452665 + g 83 -6.4 -4.99861 | overlap 1452640 ATAAGCTGCTCGATT GTAGCT TCT AGCTGC TTTTTGTCGTTAGTG TERM 1590 1453350 - 1453330 - g 70 -8.9 -3.35597 | opp_overlap 1453328 1453341, overlap 1453328 1453333 TGGAGTGTGCAAATA CGACCCCAG AGG CTGGGGGCA GCATTTTCAATGGCC TERM 1591 1453347 - 1453333 - g 74 -11.4 -2.84504 | opp_overlap 1453328 1453341, overlap 1453330 1453328 AGTGTGCAAATACGA CCCCAG AGG CTGGGG GCAGCATTTTCAATG TERM 1592 1454111 - 1454131 + G 77 -6.8 -4.41348 | AATGAAAATGTGAAT GGTGCCAA AACCG TAGGCACC TTTATTTGGGGGGGG TERM 1593 1454332 - 1454313 - g 88 -5.7 -5.61596 | ATGGCGAGAAAAAAA TGGCACC CCTACC GGTACCA GAAGCGCCAATATTA Sde_1121 1453046 - 1454617 + | hypothetical protein TERM 1594 1454640 - 1454681 + F 71 -8.7 -3.34089 | opp_overlap 1454654, overlap 1454638 1454633 1454641 AAAACTGTTTATTTT CGTACCCCAATGTACGCAA TTAA TTGCGTGTGTTGGGGGGCA TATTAATTATTAAAC TERM 1595 1454641 - 1454680 + F 83 -12.2 -2.59971 | opp_overlap 1454654, overlap 1454640 1454638 1454633 AAACTGTTTATTTTC GTACCCCAATGTACGCAA TTAA TTGCGTGTGTTGGGGGGC ATATTAATTATTAAA Sde_1122 1455580 - 1456632 + | ABC transporter, periplasmic substrate-binding protein TERM 1596 1456766 - 1456733 - f 75 -10.3 -2.77431 | gap 1, overlap 1456732 AAAATAGGTGCAAAT TGGAGCCGGCCGCTCT ACT AGAGCGGCCAAC-CTA CCGGCTGAATACAGC TERM 1597 1456844 - 1456865 + G 73 -2.4 -5.18715 | CCCTTGGCTGTATTT TTAGGAAT ATTCCC ATTCTTAA TTTTGTTGTTTTTGT Sde_1123 1456796 - 1457611 + | ABC transporter, permease protein TERM 1598 1458088 - 1458064 - g 70 -5 -4.43877 | gap 1, overlap 1458066 1458067 CAAGCGGTAAATAAA TACCCGCACGA ACTT TCGGGCG-GTA TGCAGCAGCGTTTAG Sde_1124 1457620 - 1458423 + | ABC transporter TERM 1599 1458839 - 1458849 + G 78 -5.4 -4.74801 | CTTGGCAGCAAAACG GCTA CGA TAGC TTTTTGGTCGAATTG Sde_1125 1458451 - 1459188 + | 5'-3' exonuclease TERM 1600 1459274 - 1459229 - g 89 -5.3 -5.65177 | gap 1, opp_overlap 1459235 1459236, overlap 1459236 1459237 1459238 ACAGTGATAAAAAAA TAGAAAATGCC-GCAGCGACCG CTA CGGTGGCAGCAGGCGATTACTA CCTAGCAGAAATTAA TERM 1601 1459267 - 1459236 - g 85 -6.4 -5.11475 | gap 1, opp_overlap 1459235 1459236, overlap 1459229 1459237 1459238 TAAAAAAATAGAAAA TGCC-GCAGCGACCG CTA CGGTGGCAGCAGGCG ATTACTACCTAGCAG TERM 1602 1459266 - 1459237 - g 75 -9.9 -3.63225 | gap 1, opp_overlap 1459236 1459235, overlap 1459236 1459229 1459238 AAAAAAATAGAAAAT GCC-GCAGCGACCG CTA CGGTGGCAGCAGGC GATTACTACCTAGCA Sde_1126 1459204 - 1459842 + | hypothetical protein TERM 1603 1461285 - 1461266 - g 74 -7.1 -4.24948 | opp_overlap 1461265 CCAGCACATGTAAAA GCGGGCA GTTACT TACCCGC AGTTTGGCCGAATTT TERM 1604 1461961 - 1461974 + G 74 -8.1 -3.90112 | CACTACAACTCTAGT CGCAC CGGC GTGCG TTTAATTGGGCCCAA Sde_1127 1459939 - 1463568 + | putative allophanate hydrolase TERM 1605 1464005 - 1463986 - g 76 -5.1 -4.74103 | TGGCGAAGGTAAAAA TGTATTC AATCAA GAATACA TATCGGGTGGCAGCA TERM 1606 1464585 - 1464561 - g 75 -10.1 -3.64703 | opp_overlap 1464550 TGCCGGTTATTCAAA CCATTATTGGC AAT GGCAATAATGG CAAAGCAAGCGATGC Sde_1128 1463570 - 1465366 + | amidase family protein TERM 1607 1465419 - 1465446 + T 73 -9.9 -2.99319 | opp_overlap 1465424, overlap 1465424 GCCTGCGACAGCCCA AAAAAGCCCGC GTTTTA GCGGGCTTTTA TATGTATACACGGTT TERM 1608 1465441 - 1465424 - T 100 -9.8 -5.07567 | opp_overlap 1465419 1465424 CGACAGCCCAAAAAA GCCCGC GTTTTA GCGGGC TTTTATATGTATACA TERM 1609 1465424 - 1465441 + T 100 -9.8 -4.64844 | opp_overlap 1465424, overlap 1465419 CGACAGCCCAAAAAA GCCCGC GTTTTA GCGGGC TTTTATATGTATACA Sde_1129 1466081 - 1465476 - | diguanylate cyclase/phosphodiesterase TERM 1610 1466531 - 1466556 + r 100 -14.9 -5.81412 | opp_overlap 1466527 1466537 TCCGCAAATAGCGAC GGGAAAGTGAA TTAG TTCACTTTCCC TTTTTTTTGCCTGAA Sde_1130 1467124 - 1466591 - | putative tRNA/rRNA methyltransferase Sde_1131 1467289 - 1468230 + | hypothetical protein Sde_1132 1468230 - 1468838 + | methionine sulfoxide reductase B TERM 1611 1469321 - 1469301 - g 71 -7.6 -3.99444 | overlap 1469319 AACAACACGCAGAAA CGCTACCT GAAGA AGATAGCG AAGAGTTTCTTGCAG Sde_1133 1468835 - 1469554 + | hypothetical protein Sde_1134 1469562 - 1469879 + | hypothetical protein TERM 1612 1470602 - 1470588 - g 79 -2.9 -5.28176 | TGTATCGACAAAAAA CAAAA CAGAT TTTTG GCAAGACTTGAAATT Sde_1135 1469959 - 1471590 + | MSHA biogenesis protein MshL TERM 1613 1472294 - 1472308 + G 72 -8.5 -3.79882 | AATTGCAAAGGCTGC CGGGG GAATA CCCCG TTTGGTAAATATTCT Sde_1136 1471611 - 1472501 + | MSHA biogenesis protein MshM TERM 1614 1473400 - 1473388 - g 74 -6.9 -4.20136 | overlap 1473374 1473371 1473383 AGCTGCAAAAGCAAA GCAGC TTG GCCGC GAGGGCAGCATGAAT TERM 1615 1473919 - 1473900 - g 72 -5 -4.65895 | gap 1, overlap 1473902 TGGCTTACGCAAAAA GC-CAGCTG GCG CAACTGCGC AAAGAAGAACATGTG Sde_1137 1472498 - 1473952 + | ATPase TERM 1616 1474520 - 1474494 - g 74 -8.1 -3.84825 | TGCACCCATAGTAAA GCTTCTGCAAA AAATA TTTGAAGAAGC CATTAATACCCGCGC TERM 1617 1474878 - 1474899 + G 73 -10.1 -3.33696 | GTTTCGTCACGTCAT TACCCGCCC GCAC GGGCTGGTA TTAGTTACCGGGCCG TERM 1618 1475410 - 1475400 - g 79 -4 -5.24796 | overlap 1475394 GCTAGAGAATAAAAA CTTT AAA AAAG GGCGGGGGTGTATTC Sde_1138 1473946 - 1475694 + | type II secretory pathway, ATPase Sde_1139 1475694 - 1476914 + | MSHA biogenesis protein MshG Sde_1140 1476917 - 1477459 + | adenylyl cyclase class-3/4/guanylyl cyclase TERM 1619 1477714 - 1477696 - g 79 -12.4 -2.80816 | opp_overlap 1477688 TGTGGACTTATCAGA CGCAGCGG AAA CCGCTACG GCTAGGAATATTGCT Sde_1141 1477589 - 1477969 + | MSHA pilin protein MshB TERM 1620 1478048 - 1478074 + G 76 -8 -4.20368 | opp_overlap 1478048, overlap 1478049 CATTGGTCGAACTTA TTGCGGTAATCG TCG TGATTGCCGCAC TTTCTGTTACCGTCG TERM 1621 1478049 - 1478073 + G 75 -11.5 -3.11738 | opp_overlap 1478048, overlap 1478048 ATTGGTCGAACTTAT TGCGGTAATCG TCG TGATTGCCGCA CTTTCTGTTACCGTC Sde_1142 1478002 - 1478442 + | cellulose binding, type IV Sde_1143 1478486 - 1478956 + | hypothetical protein TERM 1622 1479020 - 1479038 + G 95 -11.8 -3.96387 | CGCGTAGCCTGCGGG GTAAAGCC ATG GGCTTTAC TTTGGTTGAGTTAAT Sde_1144 1478956 - 1479804 + | MSHA biogenesis protein MshO Sde_1145 1479801 - 1480235 + | hypothetical protein TERM 1623 1481159 - 1481146 - g 74 -8.1 -3.86015 | opp_overlap 1481145 1481153 TACGCCTGCCATAAA TGCCG ACCC CGGCA CGTGTTATTATGGTG TERM 1624 1484018 - 1484005 - g 76 -8.1 -4.14739 | GCATTCAGCGGAAAA TGCCG ATAG CGGCA CCAACCTCGCCTCAC Sde_1146 1480232 - 1484746 + | hypothetical protein Sde_1147 1485638 - 1484823 - | hypothetical protein TERM 1625 1485594 - 1485608 + g 91 -7 -5.53991 | overlap 1485592 GTTGGCAGTTTCGGG GCGGTC TTC GTCCGC TTTTTTTAGTGCATC TERM 1626 1485678 - 1485695 + r 71 -3.3 -5.05577 | overlap 1485680 GTAAACGGGTTGTAA CGGGGTA TCTA TGCCCAG TTTTTCGTTTAATTT Sde_1148 1487345 - 1485654 - | general secretion pathway protein A Sde_1149 1487522 - 1488004 + | cellulose-binding family II protein Sde_1150 1488537 - 1488001 - | cellulose-binding family II protein Sde_1151 1488732 - 1488980 + | hypothetical protein Sde_1152 1488970 - 1489626 + | hypothetical protein Sde_1153 1489623 - 1490672 + | putative RNA 2'-O-ribose methyltransferase TERM 1627 1490658 - 1490681 + T 83 -9.6 -3.9122 | overlap 1490654 1490671 1490672 GAGGTAACTGGGCAT TTGGTGCTGT TTTA GCAGCGCCAA TTATTTAGGGCGCTG Sde_1154 1491004 - 1490723 - | hypothetical protein Sde_1155 1491242 - 1491490 + | regulatory protein, MarR Sde_1156 1492450 - 1491752 - | hypothetical protein Sde_1157 1492655 - 1493272 + | diaminobutyrate-2-oxoglutarate transaminase TERM 1628 1494144 - 1494160 + G 73 -8 -4.09243 | CAATTGGCCGCCTCA CTGGGT TTTCC ACCCAG TTTTGCGGAAGTATA Sde_1158 1493307 - 1494176 + | exodeoxyribonuclease IX Sde_1159 1494222 - 1495343 + | erythronate-4-phosphate dehydrogenase Sde_1160 1495346 - 1496539 + | hypothetical protein Sde_1161 1496564 - 1497526 + | hypothetical protein Sde_1162 1499318 - 1497555 - | diguanylate cyclase/phosphodiesterase Sde_1163 1499867 - 1499406 - | hypothetical protein TERM 1629 1499720 - 1499752 + g 72 -8.3 -3.68292 | opp_overlap 1499709, overlap 1499748 TAAAGCGCGGGCTGT GCAGGCCGAACTCGT CTG GTGAGTCTGGCCCGC TTATGTCTTCCACAT TERM 1630 1499820 - 1499802 - G 76 -11.8 -2.7264 | opp_overlap 1499802 1499801 1499799 1499797, overlap 1499791 1499790 1499801 AAACCGCTTGTAAAG CGCCAAAA GTA TTTTGGCG GTATCTTTACAAAAG TERM 1631 1499802 - 1499820 + g 76 -11.8 -2.54325 | opp_overlap 1499791 1499790 1499801 1499802, overlap 1499801 1499799 1499797 AAACCGCTTGTAAAG CGCCAAAA GTA TTTTGGCG GTATCTTTACAAAAG Sde_1164 1501169 - 1499898 - | aminotransferase AlaT TERM 1632 1501485 - 1501465 - g 78 -6.1 -4.57837 | ATATGCCGTGAAAAA GGTACAGAG CGA CCCTTTACC GGTGAGTACTGTGAT Sde_1165 1501384 - 1501788 + | protein-methionine-S-oxide reductase TERM 1633 1502101 - 1502116 + G 73 -10.4 -2.97475 | opp_overlap 1502099 1502111, overlap 1502100 GTAAAATAAAATCCG TGCGCG AGAA CGCGCA ATTTGTGGTGCGCGA TERM 1634 1502146 - 1502158 + G 78 -4.7 -5.03145 | AAAGTAAAGAGCACG GCGGC TTT GGCGC TTTTTTGGCCGCTTG TERM 1635 1502358 - 1502368 + G 74 -6.8 -4.23213 | opp_overlap 1502350, overlap 1502350 CCCAAACCGCCGGCT TCGC AGC GCGA TTTATTCGCTATACA Sde_1166 1501785 - 1502465 + | hypothetical protein Sde_1167 1502495 - 1503196 + | CBS TERM 1636 1503228 - 1503257 + T 77 -8.6 -3.9461 | GTTCTAAGGTGTTCA GTACGCTTGCGG GGTTAG TCGTAAGCGTGC TTCTTCTTCCAGAAG Sde_1168 1504033 - 1503242 - | hypothetical protein TERM 1637 1503676 - 1503695 + g 79 -9.2 -4.19238 | TTACTTCTTTTACTT GCTGCTGG TTAT CCAGCCGC TTTTGCGGTTGCGGC TERM 1638 1504569 - 1504609 + r 100 -12.1 -4.11751 | CTCCATATTTTAGGA TTGAGTTTAGTAAGTAAGT TTA ACTGCCTTACTAAACTCGA TTTTACGACATTGGT TERM 1639 1504689 - 1504668 - R 100 -9.4 -4.81851 | opp_overlap 1504668 AGTTAAATTTAAAAA GCGCAGCT GTTAAA AGCCGCGC TTTTTTTTTGCTTTT TERM 1640 1504668 - 1504689 + r 100 -7.2 -6.31682 | opp_overlap 1504668 AGTTAAATTTAAAAA GCGCAGCT GTTAAA AGCCGCGC TTTTTTTTTGCTTTT Sde_1169 1505132 - 1504713 - | Signal recognition particle protein TERM 1641 1505338 - 1505350 + G 74 -3.3 -5.03715 | GCGTGGACCTAACTG TAGCC GAA GGCGA TTTTTTCGCACTGCT Sde_1170 1505235 - 1506191 + | ribosomal protein S16 Sde_1171 1506188 - 1506961 + | 16S rRNA processing protein RimM queF 1507120 - 1507926 + | 7-cyano-7-deazaguanine reductase Sde_1173 1509360 - 1507978 - | ribosomal protein L19 TERM 1642 1508704 - 1508680 - G 82 -7.2 -4.84017 | gap 1, opp_overlap 1508682 1508684 AATGTCGGAGAAAAA TACCGTAACGC GCTT GCGCT-CGGTA CTTAGGTCTTTCTCT TERM 1643 1508795 - 1508812 + g 81 -4.9 -5.20534 | overlap 1508805 CGTAACTTGTAGAGC GTTTGTT CGTT AACAAGC TTTTTGTTGCTTAAT Sde_1174 1510735 - 1509491 - | hypothetical protein TERM 1644 1509573 - 1509591 + g 72 -3.1 -5.0538 | AGCTCTTTTTTAAGT GCGGT ACTATCTTC ACCGC TTTTTTCCGCTGGGC TERM 1645 1510923 - 1510935 + r 70 -7.7 -3.62348 | opp_overlap 1510919, overlap 1510921 CCCTCTTTAAACGTT GCGTT TGA AACGC TGTTTGTGTAGAGTT TERM 1646 1511055 - 1511043 - R 80 -10.5 -3.48276 | GCTTTGCGGAGACAA CGCCC GCA GGGCG ATAACGAGCACGCAG TERM 1647 1511181 - 1511169 - R 80 -10.5 -3.48276 | GCTTTGCGGAGACAA CGCCC GCA GGGCG ATAACGAGCACGCAG TERM 1648 1511370 - 1511401 + r 70 -8 -3.59946 | gap 1, overlap 1511367 1511373 TCCTGTGTACGCCGG CCA-GCCTGGCAGTA TAG TGCTGCGGGGCTTGG TTATCTCCTTGAACG TERM 1649 1511373 - 1511397 + r 71 -8.5 -3.52147 | overlap 1511367 1511370 TGTGTACGCCGGCCA GCCTGGCAGTA TAG TGCTGCGGGGC TTGGTTATCTCCTTG TERM 1650 1511475 - 1511489 + r 70 -2.8 -5.01422 | ATTTAGCTCCATTTA TACCTG CTA CAGCTA TTTATTTTTCTCTAG TERM 1651 1511607 - 1511628 + r 86 -10.1 -3.92075 | opp_overlap 1511607 CCTTTAAGCAAAAAA GCCCCAGCT ATAC AGCTAGGGC TTTATAGGTAGCGCT TERM 1652 1511628 - 1511607 - R 100 -12.3 -5.26875 | opp_overlap 1511607 CCTTTAAGCAAAAAA GCCCCAGCT ATAC AGCTAGGGC TTTATAGGTAGCGCT Sde_1175 1513481 - 1511685 - | agarase TERM 1653 1513755 - 1513742 - g 71 -3.9 -4.85396 | AGAATCAGAATAAAA TGAAA ATTT TTTCA GTTAAGAAAATGCTG Sde_1176 1513741 - 1516074 + | agarase TERM 1654 1516221 - 1516249 + F 74 -9.6 -3.28712 | opp_overlap 1516220 1516219 1516223, overlap 1516223 ATTTTTTATCAAACG CAGGCCGAGCAA TAAGT TTGCTTGGCCTA TTGTAAAGGCAAAAA TERM 1655 1516223 - 1516247 + F 86 -12.2 -3.21276 | opp_overlap 1516223 1516220 1516219, overlap 1516221 TTTTTATCAAACGCA GGCCGAGCAA TAAGT TTGCTTGGCC TATTGTAAAGGCAAA TERM 1656 1516247 - 1516223 - f 71 -10 -2.67803 | opp_overlap 1516221 1516223, overlap 1516220 1516219 TTTTTATCAAACGCA GGCCGAGCAA TAAGT TTGCTTGGCC TATTGTAAAGGCAAA TERM 1657 1516787 - 1516808 + G 79 -2.9 -5.27938 | GTAAAAAAATAGGAG GGCGCATCA ACGG TTATACGCC TTTTTATTTCGACAT TERM 1658 1518613 - 1518596 - g 80 -6.9 -4.55887 | opp_overlap 1518595 1518593 1518596 TGGCAAAAATAGAAA CGGCAGG GAAC CCTGTCG CTGTTTCGCATACCA TERM 1659 1518663 - 1518642 - g 74 -3.6 -4.9218 | CATTGATCACAAAAA GCTACCGC TAGATG GCGAAAGC GTAGCGCACGTAGAA Sde_1177 1516378 - 1518957 + | threonine synthase Sde_1178 1519915 - 1519016 - | ApbE family protein TERM 1660 1519846 - 1519803 - G 90 -13.4 -3.53012 | gap 1, opp_overlap 1519804, overlap 1519804 GTTTTTTGCGCGAAA CTGGCTTCAGAGGTGCGAA TGTGTAT TTCGCAC-TCTGAAGCCAT TAGCTTAAATAAGCC TERM 1661 1519845 - 1519804 - G 95 -16.9 -2.71712 | gap 1, opp_overlap 1519804, overlap 1519803 TTTTTTGCGCGAAAC TGGCTTCAGAGGTGCGAA TGTGTAT TTCGCAC-TCTGAAGCCA TTAGCTTAAATAAGC TERM 1662 1519804 - 1519845 + g 100 -16.9 -3.19192 | gap 1, opp_overlap 1519803 1519804 TTTTTTGCGCGAAAC TGGCTTCAGAGGTGCGAA TGTGTAT TTCGCAC-TCTGAAGCCA TTAGCTTAAATAAGC Sde_1179 1521350 - 1519935 - | hypothetical protein TERM 1663 1520220 - 1520208 - G 74 -3.3 -5.00884 | opp_overlap 1520208 ACTGTGCCTAAAAAA GTCCG CAT CCGAC TGTTTGTATATTCGA TERM 1664 1520779 - 1520793 + g 75 -2.8 -5.10208 | opp_overlap 1520779 TAAGAGGCCGATAAA GAAAAC TGC GTATTC TTTTTGTTAGCATTG TERM 1665 1521027 - 1521039 + g 77 -6.9 -4.46212 | overlap 1521022 1521028 CTGCGCAGTAGGGCT TGGGG CAG CCCCG TTTTCTGATGGCCCA TERM 1666 1521610 - 1521642 + r 86 -12.1 -3.06261 | TAGAGTCTGTGTTGG GGTATAGCGCTTAGG AAC CCTAAGCGCTATAGG TGTTGCAGCTTCAAA Sde_1180 1522160 - 1521678 - | RecJ exonuclease TERM 1667 1521877 - 1521890 + g 73 -2.3 -5.16841 | opp_overlap 1521877 TTATTCTTTAAGAAC GCTTC TGCA GTAGC TTTTTCTTCATCTAG TERM 1668 1521995 - 1521967 - G 76 -8.9 -3.76952 | overlap 1521969 TTCATCCAAGGGAAA GATTCTTGGCATG GCT CACACCAAGAAGC CCAAAAATCGATAAG TERM 1669 1521993 - 1521969 - G 73 -10.1 -3.46783 | overlap 1521967 CATCCAAGGGAAAGA TTCTTGGCATG GCT CACACCAAGAA GCCCAAAAATCGATA Sde_1181 1524075 - 1522189 - | thiol:disulfide interchange protein DsbD TERM 1670 1523012 - 1523030 + g 78 -12.4 -2.62396 | overlap 1522996 GTACCGCCCATTAGT GCGCCACC TTG GGTGGTGC TGATGTAAACAAGTG TERM 1671 1524616 - 1524639 + H 73 -3.9 -4.91987 | TTTCGTTTTTGTTGT TTGCAAAAG GTAATG CTTCTGCAA TTTTGTTATTACATT TERM 1672 1525073 - 1525055 - H 79 -7.6 -4.39133 | TAACAATTAGTAAAA TTTTTGTT TTT AACAAAAA AGCAGTCAGCAAAAT TERM 1673 1526048 - 1526061 + G 72 -6.7 -4.23707 | TTGGCCTATTCATTA GATGC GACT GCATC TTTCTTAAACTTTGT TERM 1674 1526510 - 1526526 + G 76 -2.1 -5.31091 | overlap 1526511 CTAAATGTTATTAGC ACCACGG TGC CAGTGGA TTTTGTTTTGTTCTA Sde_1182 1525439 - 1526554 + | hypothetical protein TERM 1675 1529116 - 1529133 + G 71 -7.7 -3.87815 | TTCGTCGTTCTGTGC GCGTACG CCGT CGTATGC TTTGTCAGGATCAAC TERM 1676 1529693 - 1529679 - g 70 -10 -3.05463 | ATGGGTTCCATGCAA GCGGTA CGT TACCGC AAAGCGTGGGCGCGT Sde_1183 1526583 - 1529711 + | peptide chain release factor 2 TERM 1677 1529753 - 1529717 - f 100 -9.6 -4.63218 | gap 1, opp_overlap 1529718 1529720, overlap 1529718 1529721 1529747 1529748 GGCGCGTTAATAAAA CTCAGTGCTTTACCGAA CGAG TTCGGTAAAGCACCT-G CTTAGGTGATAACAA TERM 1678 1529754 - 1529718 - f 89 -11.8 -3.3761 | gap 1, opp_overlap 1529718 1529720, overlap 1529717 1529721 1529747 1529748 GCGCGTTAATAAAAC TCAG-TGCTTTACCGAA CGAG TTCGGTAAAGCACCTGC TTAGGTGATAACAAA TERM 1679 1529718 - 1529754 + F 86 -11.8 -3.09516 | gap 1, opp_overlap 1529717 1529718 1529721 1529747 1529748, overlap 1529720 GCGCGTTAATAAAAC TCAG-TGCTTTACCGAA CGAG TTCGGTAAAGCACCTGC TTAGGTGATAACAAA TERM 1680 1529720 - 1529751 + F 100 -14.6 -2.76263 | opp_overlap 1529717 1529718 1529721 1529747 1529748, overlap 1529718 GCGTTAATAAAACTC AGTGCTTTACCGAA CGAG TTCGGTAAAGCACC TGCTTAGGTGATAAC TERM 1681 1529750 - 1529721 - f 100 -18.1 -2.84841 | opp_overlap 1529720 1529718, overlap 1529717 1529718 1529747 1529748 CGTTAATAAAACTCA GTGCTTTACCGAA CGAG TTCGGTAAAGCAC CTGCTTAGGTGATAA TERM 1682 1530386 - 1530401 + G 76 -9 -3.67517 | opp_overlap 1530375 1530372 GGCAGCGTTATCGAC GCGCAT AAAG ATGCGC TTTCGGCTCTTACTA Sde_1184 1529810 - 1531048 + | lysyl-tRNA synthetase, class-2 TERM 1683 1531058 - 1531092 + F 100 -12.3 -5.16472 | gap 1 ACCTAAAGCTCCAAT CTGT-GTGCGCCTACG TTTT TGTAGGCGCATTACAG TTTTTTACGCTTTTT Sde_1185 1531150 - 1532037 + | Uracil-DNA glycosylase Sde_1186 1532101 - 1532640 + | hypothetical protein TERM 1684 1532995 - 1532980 - g 83 -4.6 -5.28176 | opp_overlap 1532980 CGTATCTAGAAAAAA GCCCCT ATAT AGGTGC CTTAGTTGGCCGTTA Sde_1187 1532766 - 1533830 + | aldose 1-epimerase Sde_1188 1534330 - 1533827 - | MarR family transcriptional regulator TERM 1685 1534226 - 1534248 + g 76 -4.7 -4.77759 | opp_overlap 1534222 TTGCAGCAACAGCAG CTGCGGCGC GGTGA GCCCCGAAG TTTTTACTAGCTTCT TERM 1686 1535218 - 1535231 + G 71 -3.7 -4.88918 | TCATTTTAATGGCGC GCACG ACGA CGAGC TTTTGTTTACCGTCG Sde_1189 1534736 - 1535257 + | L-2,4-diaminobutyric acid acetyltransferase Sde_1190 1535350 - 1536624 + | diaminobutyrate--2-oxoglutarate aminotransferase ectC 1536678 - 1537076 + | L-ectoine synthase TERM 1687 1537324 - 1537287 - g 83 -4.2 -5.34555 | gap 2, opp_overlap 1537296 1537299, overlap 1537288 1537296 CTAGAGCATAAAAAA TCCG-GC-AAAGCGGGCG TTTT CGCCTACTTTAGCTCAGA TGAAGATGCTGGTTC TERM 1688 1538282 - 1538270 - g 80 -6.2 -4.90302 | overlap 1538271 CATGAAGAAAATAAA GCGC GTACA GCGC GAGCTTGAAGAAATG TERM 1689 1538491 - 1538475 - g 75 -10.1 -3.62597 | TTTATTGTTGAAGAA GCAGCCT ACG AGGCCGC GGTTAGAGCACTGCA Sde_1192 1537125 - 1538558 + | aspartate kinase TERM 1690 1538719 - 1538684 - g 71 -6.9 -4.18494 | gap 1, opp_overlap 1538684 1538684 1538683, overlap 1538695 GATGCTCAGGCAAAA GGTGTAGTAGAGGCTC TAGAT GAGCCACT-CTACAAC CCTTTTGTTGAGCGC TERM 1691 1538962 - 1538949 - g 83 -2.4 -5.80951 | ACCTAAAAGAAAAAA TGCA AGGTCA TGCA GATGAAGAGATCTCA Sde_1193 1538546 - 1539463 + | hypothetical protein Sde_1194 1539499 - 1540929 + | cytochrome bd ubiquinol oxidase, subunit II TERM 1692 1541838 - 1541868 + G 79 -9 -4.13945 | overlap 1541839 GTTTAGCTTGTTATG TTTTTCACCGCAGG CTG CGGGCGGTGAAAAG TTTTCCGATGCGAAT TERM 1693 1541839 - 1541867 + G 73 -10.3 -3.08046 | overlap 1541838 TTTAGCTTGTTATGT TTTTCACCGCAGG CTG CGGGCGGTGAAAA GTTTTCCGATGCGAA TERM 1694 1542039 - 1542026 - g 78 -5.2 -5.00616 | overlap 1542027 TTTTTCGTGAAAAAA CGGC ATTACA GCCG ATGGATTTCTATCGC Sde_1195 1541491 - 1542282 + | hypothetical protein Sde_1196 1543133 - 1542297 - | hypothetical protein TERM 1695 1543193 - 1543183 - H 71 -8.2 -3.56099 | GATAAGCGCCTGAAA CCGC AAA GCGG GATGTGTAGAATATT Sde_1197 1543278 - 1543595 + | hypothetical protein Sde_1198 1543902 - 1543585 - | hypothetical protein Sde_1199 1544157 - 1544693 + | NUDIX hydrolase TERM 1696 1544672 - 1544687 + T 76 -10.4 -3.03124 | TGGTGTGGTGCTGCA GGCACC GGAA GGTGCC TGTTAACCGCTAAGC Sde_1200 1545977 - 1544697 - | metal dependent phosphohydrolase TERM 1697 1545061 - 1545072 + g 71 -3.6 -4.89477 | overlap 1545056 TCATCTACCACAATA GCGG TGCG TCGC TTTTGTTGTTGAAAG TERM 1698 1545797 - 1545785 - G 79 -9.1 -4.09963 | TGCCAATAAGAATAA CGCCT ATT AGGCG CTCAGGGCGGGCAAG Sde_1201 1546861 - 1546076 - | metal dependent phosphohydrolase TERM 1699 1546311 - 1546285 - G 73 -4.5 -4.82901 | gap 1 TGTTTTCGATAAAAA TCACGCCTGACA ATAT TG-CAAGCGTAA GCAGTATTTCACCCG TERM 1700 1548100 - 1548114 + G 71 -10 -3.28712 | overlap 1548080 GCATCCTTGGGATGG GCGACA TTA TGTCGC TTATCGAAGAGGCGG Sde_1202 1547130 - 1548617 + | signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB Sde_1203 1548771 - 1549019 + | SSU ribosomal protein S16P TERM 1701 1549009 - 1549028 + F 83 -10.7 -3.45571 | opp_overlap 1549002 1549001 1548999, overlap 1549005 1549003 TCAAAGATGCAGCTG CTGCGGC TTAATT GCCGCAG TTAGTGTTTACACCA Sde_1204 1549032 - 1549583 + | 16S rRNA processing protein RimM TERM 1702 1549586 - 1549603 + F 76 -7.7 -4.21631 | CCCAGAATTTTAATT TGTACGC TATG GCGTGCA TTTATTGCGTCCCTT Sde_1205 1549661 - 1550500 + | tRNA (Guanine37-N(1)-) methyltransferase rplS 1550552 - 1550908 + | 50S ribosomal protein L19 TERM 1703 1550943 - 1550928 - T 100 -10.4 -5.40072 | opp_overlap 1550928 TTCTTTCTAAAAAAA GCGACC TATT GGTCGC TTTTTTTTCGCCTCT TERM 1704 1550928 - 1550943 + T 100 -10.4 -5.79526 | opp_overlap 1550928 TTCTTTCTAAAAAAA GCGACC TATT GGTCGC TTTTTTTTCGCCTCT TERM 1705 1550955 - 1550971 + T 75 -2.3 -5.39221 | TCGCTTTTTTTTCGC CTCTA TTTTACC TAGAG TTTTTTACTTCTTCT Sde_1207 1551323 - 1550976 - | diguanylate cyclase/phosphodiesterase TERM 1706 1551011 - 1551022 + g 70 -2.2 -5.04222 | CTTCGGCTTTGTTTT TGGC TTCG GTCA TTTTTGCTTTGCTTG Sde_1208 1551628 - 1552422 + | thiol:disulfide interchange protein DsbC TERM 1707 1553060 - 1553080 + G 82 -11.1 -3.53444 | GGGCGGTATTCCTAT CATTCGCGC CAT GCGCGAAGG TTTAGCAGCCAATAA Sde_1209 1552608 - 1553960 + | homoserine dehydrogenase Sde_1210 1554008 - 1555405 + | threonine synthase TERM 1708 1555429 - 1555444 + F 100 -8.2 -5.83822 | opp_overlap 1555429 GCTTTAGATTTAAAA CGCTCC TATC GGGGCG TTTTTTTTGCCTATG TERM 1709 1556006 - 1555989 - g 75 -6.3 -4.46073 | GTGGAATAGAAGAAA TTTACGC GCTA GCGCAAA AATCACTGGAAGACG Sde_1211 1555493 - 1556209 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1710 1556235 - 1556251 + F 78 -5.7 -4.84761 | TTGTTGAGTCTTATT GGTGCGC AAG GTGCTCC TTTTTATAGCAATAT Sde_1212 1556465 - 1557295 + | enolase TERM 1711 1558921 - 1558907 - g 74 -5.6 -4.7329 | AAAAGCACTTAAAAA TGGTGG TAA CCCCCA GTGAGTACTCTGGGT Sde_1213 1557346 - 1559091 + | exonuclease RecJ Sde_1214 1559381 - 1559145 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 1712 1559543 - 1559555 + r 71 -4.1 -4.82901 | TTAAAAAGTTGTGAT CGCAT TGT ATGTG TTTTTGTGACGAAAG TERM 1713 1559656 - 1559624 - R 100 -16.4 -4.11216 | opp_overlap 1559631, overlap 1559631 TCTTGAGTGCTAAAA CGAAAAACGGCGCC ACAAA GGCGCCGTTTTTAG AGAGGTGTTTGGCGG TERM 1714 1559649 - 1559631 - R 100 -13.1 -5.0925 | opp_overlap 1559631, overlap 1559624 TGCTAAAACGAAAAA CGGCGCC ACAAA GGCGCCG TTTTTAGAGAGGTGT TERM 1715 1559631 - 1559649 + r 100 -13.1 -4.57837 | opp_overlap 1559624 1559631 TGCTAAAACGAAAAA CGGCGCC ACAAA GGCGCCG TTTTTAGAGAGGTGT Sde_1215 1562653 - 1559672 - | MECDP-synthase TERM 1716 1563236 - 1563226 - g 76 -8.2 -4.12942 | CGAAACCCTCGAAAA CGGC GTT GCCG ATTGCCGCGAGCTGC TERM 1717 1563744 - 1563710 - g 76 -4.8 -4.84602 | overlap 1563711 ATAGAAATAAACAAA GCCGATGTGCGAGAAG ATA CTTACCGCGCGTCGGG TGCGGGTGGTCAGCA Sde_1216 1563056 - 1564099 + | peptide chain release factor 2 TERM 1718 1564364 - 1564350 - g 77 -7.2 -4.38712 | overlap 1564358 GCCATGGCGATAAAA CTAAAG AGG CTTTAG AAGAAGCGGCTGAAG TERM 1719 1564775 - 1564754 - g 80 -5.9 -5.00138 | overlap 1564747 TATTTAAACGAAAAA GCGTTTTTA GAAG TAGAAACGC CCATGCTGCAAACTA Sde_1217 1564187 - 1565695 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1720 1565700 - 1565734 + F 74 -4.4 -5.00895 | gap 3, opp_overlap 1565700 1565697, overlap 1565700 1565701 1565702 GTCCTGAGTAAACAT CC--TG-TGGGCACTCC TATA GGGGTGCCCAACACTGG TTTTTCTATGATGCA TERM 1721 1565702 - 1565730 + F 83 -11.8 -2.60854 | gap 1, opp_overlap 1565700 1565697, overlap 1565701 1565700 1565700 CCTGAGTAAACATCC TG-TGGGCACTCC TATA GGGGTGCCCAACA CTGGTTTTTCTATGA TERM 1722 1565884 - 1565862 - g 88 -3.5 -5.75342 | gap 1, overlap 1565865 CTTCGCGAAAAAAAA GCA-GGTAAA ACTA TTTACCCCGC AGGCGAAAACATTTT TERM 1723 1565964 - 1565992 + G 100 -8.9 -5.10064 | gap 1, opp_overlap 1565957 GGGCAAGACCCGTAC CACGGCCC-TGG CCAAGC CCACGGGCTGTG TTTTTCTGTATTGCC TERM 1724 1566337 - 1566349 + G 85 -3.3 -5.55664 | overlap 1566346 ACCCATCACCGCTTT CTGCG CAC CGTGG TTTTTTTGGTAATAG Sde_1218 1565787 - 1566443 + | uracil-DNA glycosylase TERM 1725 1567034 - 1567020 - g 82 -5.6 -5.26918 | overlap 1567021 ACACTTCAGAAAAAA TGCGCT AGT AGCGCT GGAAGAAAACGTAGA TERM 1726 1567033 - 1567021 - g 76 -9.1 -3.75067 | overlap 1567020 CACTTCAGAAAAAAT GCGCT AGT AGCGC TGGAAGAAAACGTAG Sde_1219 1566451 - 1567293 + | peptidoglycan-binding LysM Sde_1220 1567375 - 1568157 + | sigma-70 factor TERM 1727 1568231 - 1568215 - f 76 -9.4 -3.41982 | opp_overlap 1568211 1568210 1568215 AAATGGATTAATGAA CAGCCC CTAGC GGGCTG TCAGTTTATTGATAA TERM 1728 1568215 - 1568231 + F 70 -9.4 -2.77283 | opp_overlap 1568215, overlap 1568211 1568210 AAATGGATTAATGAA CAGCCC CTAGC GGGCTG TCAGTTTATTGATAA TERM 1729 1568342 - 1568367 + F 100 -11.3 -4.93696 | opp_overlap 1568341 1568340 TATGTCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTTCAC TERM 1730 1568434 - 1568450 + F 100 -9.4 -5.00339 | TTGTCATCAGCCTGA CAGCCC CTAGC GGGCTG TTTTTCATTATTAGT TERM 1731 1568509 - 1568540 + F 71 -3 -4.98758 | overlap 1568512 GCGTCAGCGGGCGCC TGTGTATATTGTAG TGCA CCACAAAATACTCA TTTTTCTAGATTTTT Sde_1221 1568637 - 1569044 + | phosphoglucomutase, alpha-D-glucose phosphate-specific TERM 1732 1569059 - 1569027 - T 80 -10.5 -3.4096 | opp_overlap 1569027 1569026, overlap 1569025 AAGATATCTGAAATA CTGCGCGGTAAAGAG TAA CGCTTAACGGCGCAG GTCTTCTATATATAA TERM 1733 1569027 - 1569059 + T 74 -10.5 -2.63455 | opp_overlap 1569025 1569027, overlap 1569026 AAGATATCTGAAATA CTGCGCGGTAAAGAG TAA CGCTTAACGGCGCAG GTCTTCTATATATAA Sde_1222 1570580 - 1569048 - | spermidine synthase TERM 1734 1570639 - 1570610 - R 100 -9.1 -5.27335 | CTTGCCAAATAAAAA CGCTCCGGAAAGG TTAG CCAAACCGGAGCG TTAGGGGGTGTAACA Sde_1223 1571292 - 1570684 - | MutS 1 protein Sde_1224 1572165 - 1571314 - | hypothetical protein TERM 1735 1572254 - 1572280 + r 88 -10.9 -3.90291 | GGTTGCGCGGGTCAT CCCATACCGAC GTTGG GTCGGTATAGG TTTGGTTCCAGCCGT Sde_1225 1572980 - 1572231 - | regulatory proteins, IclR TERM 1736 1572387 - 1572335 - G 72 -4.8 -4.59773 | overlap 1572317 1572344 CTTCATCTTTAAAAA GCCATACT-AGCGCAGCGCCAGCGGC AAA GCCGCCTACG-TGCGCCCAAAATGCC ACTCCGCCCCCAGAT TERM 1737 1572377 - 1572344 - G 81 -13.1 -2.71061 | gap 1, overlap 1572335 TAAAAAGCCATACTA GCGCAGCGCCAGCGGC AAA GCCGCCTACG-TGCGC CCAAAATGCCACTCC Sde_1226 1573292 - 1573990 + | hypothetical protein TERM 1738 1574008 - 1574034 + T 70 -5.1 -4.55295 | gap 1, opp_overlap 1574012, overlap 1574004 1574011 ATATATGAGCTTAAG CTAATGGCCAGC AGTC GCTGGCCGC-AG TTTATTTATAAACCC TERM 1739 1574031 - 1574012 - T 72 -9.2 -3.18452 | opp_overlap 1574011 1574008 1574004 ATGAGCTTAAGCTAA TGGCCAGC AGTC GCTGGCCG CAGTTTATTTATAAA TERM 1740 1574141 - 1574166 + T 100 -11.3 -4.93696 | opp_overlap 1574140 1574139 TATGTCCCTATAACT TGCTCAATTCG TCCC TGAATTGAGCA TTTTTGATCTTTCAC TERM 1741 1574233 - 1574250 + T 79 -3.3 -5.32882 | overlap 1574234 TTGCCATCAGTCTGT TGCTAGC ATTC GCTGGCC TTTTTTATGCTGCTG TERM 1742 1574278 - 1574311 + T 70 -8.1 -3.59979 | opp_overlap 1574276 1574279, overlap 1574279 CTGTATTATGTAATC ACGACTGCACTTAGT GGTA ACGAAGGGCAGTCGC TTTACCGTGAAAAAC TERM 1743 1574279 - 1574310 + T 81 -11.6 -2.75844 | opp_overlap 1574279 1574276, overlap 1574278 TGTATTATGTAATCA CGACTGCACTTAGT GGTA ACGAAGGGCAGTCG CTTTACCGTGAAAAA TERM 1744 1574310 - 1574279 - T 81 -11.6 -2.76263 | opp_overlap 1574278 1574279, overlap 1574276 TGTATTATGTAATCA CGACTGCACTTAGT GGTA ACGAAGGGCAGTCG CTTTACCGTGAAAAA Sde_1227 1575292 - 1574288 - | cytochrome d ubiquinol oxidase, subunit II Sde_1228 1576728 - 1575289 - | cytochrome d ubiquinol oxidase subunit I TERM 1745 1575726 - 1575714 - G 100 -9.1 -5.15117 | GAAAACTCCAAAAAA CCGGT GCA ACCGG AGGATGGTTGCCATC TERM 1746 1576169 - 1576187 + g 72 -8.8 -3.53012 | CACCAGCTGGTAGCG TGCGCAAC GCC GTCGCGCA TTTCGAAACCCGCGG Sde_1229 1577467 - 1576904 - | hypothetical protein aroK 1577655 - 1578170 + | shikimate kinase TERM 1747 1578383 - 1578400 + T 100 -12.7 -5.73339 | opp_overlap 1578383 1578380 ATGTGTATATAACTA GCCCGCT AAAT AGCGGGC TTTTTTTGTGCTTCT TERM 1748 1578400 - 1578383 - T 89 -12.7 -2.89 | opp_overlap 1578383, overlap 1578380 ATGTGTATATAACTA GCCCGCT AAAT AGCGGGC TTTTTTTGTGCTTCT Sde_1231 1580017 - 1578452 - | TonB-dependent receptor Sde_1232 1580306 - 1581499 + | aromatic amino acid aminotransferase TERM 1749 1581519 - 1581479 - f 91 -11.8 -3.53224 | opp_overlap 1581473 1581482 1581509, overlap 1581480 GATCCGCTGGTGAAA GCCCTAACTGCCGTGCTG TAGCG CAGCACGGCAGCTGGTGG TATGGCTGCTTTAAA TERM 1750 1581518 - 1581480 - f 100 -15.3 -2.71791 | opp_overlap 1581473 1581482 1581509, overlap 1581479 ATCCGCTGGTGAAAG CCCTAACTGCCGTGCTG TAGCG CAGCACGGCAGCTGGTG GTATGGCTGCTTTAA TERM 1751 1581482 - 1581516 + F 100 -17.2 -2.66008 | opp_overlap 1581480 1581479, overlap 1581473 1581509 CCGCTGGTGAAAGCC CTAACTGCCGTGCTGT AGC GCAGCACGGCAGCTGG TGGTATGGCTGCTTT TERM 1752 1582324 - 1582308 - g 81 -3.6 -5.2853 | overlap 1582322 TACCGAAAAAGAAAA GCGCAT GATGA AAGCGC ATACTGTACACGGCC Sde_1233 1581721 - 1582893 + | TRAP dicarboxylate transporter, DctM subunit Sde_1234 1582906 - 1584180 + | HD-GYP domain-containing protein Sde_1235 1584289 - 1584762 + | GreA/GreB family elongation factor TERM 1753 1584743 - 1584784 + T 100 -7.5 -5.96894 | gap 2, opp_overlap 1584749, overlap 1584743 1584745 1584746 1584749 CTTGGTATATTAATG CCA--TAAGATACGAGCCG TAACTT CGGCCCGTATCTTAGTTGG TTTTTTTATTTACGT TERM 1754 1584743 - 1584783 + T 76 -7.7 -4.15696 | gap 1, opp_overlap 1584749, overlap 1584743 1584745 1584746 1584749 CTTGGTATATTAATG CCA-TAAGATACGAGCCG TAACTT CGGCCCGTATCTTAGTTG GTTTTTTTATTTACG TERM 1755 1584745 - 1584780 + T 91 -10.5 -4.14454 | opp_overlap 1584749, overlap 1584743 1584743 1584746 1584749 TGGTATATTAATGCC ATAAGATACGAGCCG TAACTT CGGCCCGTATCTTAG TTGGTTTTTTTATTT TERM 1756 1584746 - 1584779 + T 100 -14 -3.05012 | opp_overlap 1584749, overlap 1584745 1584743 1584743 1584749 GGTATATTAATGCCA TAAGATACGAGCCG TAACTT CGGCCCGTATCTTA GTTGGTTTTTTTATT TERM 1757 1584776 - 1584749 - T 100 -13.5 -3.37732 | opp_overlap 1584746 1584745 1584743 1584743 1584749 ATATTAATGCCATAA GATACGAGCCG TAACTT CGGCCCGTATC TTAGTTGGTTTTTTT TERM 1758 1584749 - 1584776 + T 90 -11.3 -3.61223 | opp_overlap 1584749, overlap 1584746 1584745 1584743 1584743 ATATTAATGCCATAA GATACGAGCCG TAACTT CGGCCCGTATC TTAGTTGGTTTTTTT Sde_1236 1586808 - 1584811 - | hypothetical protein TERM 1759 1585224 - 1585245 + g 76 -4.3 -4.91987 | overlap 1585225 GCGCCGCTAGCACCG TGTAGCCGC CTGC GCTGCTACC TTTTATTATTGCCTT TERM 1760 1586612 - 1586650 + g 76 -5.3 -4.77165 | gap 2, overlap 1586617 1586620 GGTAACAGGTTAATT GGGCTGTCGCCCTGCATCA TCA TGATG-GTGGTG-CGGCCC TTTTCTTCTGGGCAC Sde_1237 1586968 - 1588257 + | GntR family transcriptional regulator Sde_1238 1588348 - 1588917 + | 4-methyl-5(beta-hydroxyethyl)-thiazol monophosphate biosynthesis protein-like Sde_1239 1588950 - 1589648 + | hypothetical protein TERM 1761 1590912 - 1590926 + G 75 -10 -3.65522 | opp_overlap 1590911 1590909 1590908 1590906 TTCAGCAAATACTAC CAACGC AAA GCGTTG TTATTCGCATGGGTA Sde_1240 1589672 - 1592005 + | diguanylate cyclase/phosphodiesterase TERM 1762 1592438 - 1592450 + G 85 -3.3 -5.4833 | opp_overlap 1592438 AGGGTTGCAGCACAA GACCA ATT TGGAC TTTTTTATTCCATCG Sde_1241 1591998 - 1592873 + | hypothetical protein Sde_1242 1592876 - 1593313 + | globin family protein TERM 1763 1593479 - 1593493 + F 89 -11.4 -3.53343 | overlap 1593482 TCGAGTCCCCCACCT TCCGGC CCA GCCGGA TTTCGGCAGAGCATT TERM 1764 1593729 - 1593746 + G 74 -3.4 -5.07486 | CGGGCACCATGAGCC CTTTCC AGCACG GGGAAG TTTTTGTTACCGATG Sde_1243 1593572 - 1595203 + | CTP synthetase TERM 1765 1595414 - 1595430 + G 70 -9.5 -3.10701 | opp_overlap 1595412 1595423, overlap 1595403 1595423 GGCTTACGTAAACGT TACCCAA AAG TTGGGTA TTCCCTACGTATTTA TERM 1766 1595851 - 1595871 + G 78 -6.1 -4.62783 | opp_overlap 1595851 1595854 1595855, overlap 1595855 GCACAATGAAAGAAG TAAGCGGCG GTT TGCCGGTTA TTTTTGACGTGACTC Sde_1244 1595283 - 1596134 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1767 1596983 - 1596972 - g 75 -3 -5.15969 | overlap 1596974 GGCGAAGGTAAAAAA TTCT CTCC AGAA GAGTTCGCCGATTAC Sde_1245 1596174 - 1597460 + | enolase TERM 1768 1597528 - 1597496 - f 90 -7.1 -5.10461 | gap 1, opp_overlap 1597496 GCTAGGTAATAAAAA GCCGGCAATTTAAG TTAACG CTTGA-TTGCCGGC TTTTTTGTTTTACCA TERM 1769 1597496 - 1597528 + F 100 -10 -5.79595 | gap 1, opp_overlap 1597496 GCTAGGTAATAAAAA GCCGGCAATTTAAGT TAAC GCTTGA-TTGCCGGC TTTTTTGTTTTACCA TERM 1770 1597786 - 1597773 - g 74 -3.7 -5.05116 | GCAGAAAGAAGAAAA CGCGC GCCT GCGTG AACGCAACAGATTAC Sde_1246 1597645 - 1597947 + | cell division protein FtsB Sde_1247 1598110 - 1598805 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Sde_1248 1598808 - 1599275 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 1771 1599409 - 1599430 + G 71 -3.6 -4.79352 | overlap 1599410 CCACCCAGACTGCCA CCTTCCGC CAATTA GCGGAGGA TTTTATTGTAGATGA Sde_1249 1599354 - 1600343 + | pseudouridylate synthase TERM 1772 1600390 - 1600417 + F 100 -13.4 -3.91897 | overlap 1600385 TTTTGTTTAACTGCC GCGCGGCTTGTG CTTA TACTAGCCGCGC TTTATCAATGGACGC Sde_1250 1600482 - 1601153 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1773 1601320 - 1601305 - g 85 -6 -5.40072 | overlap 1601306 GCTCTCTTAAAAAAA TCGGCC CAGA GGCCGT GGTAGTACTATTTAA TERM 1774 1601319 - 1601306 - g 79 -9.5 -3.83561 | overlap 1601305 CTCTCTTAAAAAAAT CGGCC CAGA GGCCG TGGTAGTACTATTTA TERM 1775 1601518 - 1601554 + G 75 -3 -5.26918 | gap 1, opp_overlap 1601528 TTGTACAGCTGTATA GGCACGAAACCCA-CTG GAAA TGGCTGGATTTAGTGCC TTTTTTATGCGGTGT TERM 1776 1601773 - 1601791 + G 84 -10.2 -3.94664 | CGCTTGGAGCGTTTG CTGCGGGC TGT GCCTGCGG TTTAATGGTTTTCTC Sde_1251 1601154 - 1602098 + | membrane protein Sde_1252 1602290 - 1603072 + | lipoprotein NlpD TERM 1777 1604003 - 1603989 - g 70 -2.1 -5.00616 | CTTCTTCGGAAAAAA CAGTA GTAGA TACCG TAGCCGATCAAGATG TERM 1778 1604111 - 1604099 - g 71 -3.4 -4.75174 | GAGCTAAGCGAAAAA CAAC GCGAA GTTG TAGCACGTCGATTTG Sde_1253 1603286 - 1604287 + | RNA polymerase sigma factor RpoS TERM 1779 1604353 - 1604314 - f 75 -8.7 -3.70068 | opp_overlap 1604326, overlap 1604315 1604323 1604326 CACTACAATGTTAAA TCCATAAAAGAAGCCGC AATTCA GCGGCTTTTTTTATGAC TGTCGAATACGTGTA TERM 1780 1604352 - 1604315 - f 83 -12.2 -2.81559 | opp_overlap 1604326, overlap 1604314 1604323 1604326 ACTACAATGTTAAAT CCATAAAAGAAGCCGC AATTCA GCGGCTTTTTTTATGA CTGTCGAATACGTGT TERM 1781 1604344 - 1604323 - f 73 -5.8 -4.51196 | opp_overlap 1604326, overlap 1604315 1604314 1604326 GTTAAATCCATAAAA GAAGCCGC AATTCA GCGGCTTT TTTTATGACTGTCGA TERM 1782 1604341 - 1604326 - f 75 -7.5 -4.35693 | opp_overlap 1604326, overlap 1604323 1604315 1604314 AAATCCATAAAAGAA GCCGC AATTCA GCGGC TTTTTTTATGACTGT TERM 1783 1604326 - 1604341 + F 100 -7.5 -5.65177 | opp_overlap 1604326 1604323 1604315 1604314 AAATCCATAAAAGAA GCCGC AATTCA GCGGC TTTTTTTATGACTGT TERM 1784 1604647 - 1604633 - g 76 -4.9 -4.82667 | opp_overlap 1604633 GTACTACACTAAAAA GCCCC AAGAG GGAGC ATTAGTGAGCTTTGG Sde_1254 1604544 - 1606184 + | phosphoglucomutase TERM 1785 1606330 - 1606344 + T 100 -11.4 -4.74103 | opp_overlap 1606330 GTAGGTATAAAAAAA GCCGCT AAT AGCGGC TTTTTGCGTTCAGGC TERM 1786 1606344 - 1606330 - T 100 -11.4 -5.64274 | opp_overlap 1606330 GTAGGTATAAAAAAA GCCGCT AAT AGCGGC TTTTTGCGTTCAGGC Sde_1255 1606706 - 1606383 - | RecA DNA recombination protein Sde_1256 1609456 - 1606793 - | DNA mismatch repair protein MutS TERM 1787 1607190 - 1607167 - G 70 -2.4 -5.06414 | TTTTGTGAAGAAAAA CAATCGAG TCGTTGTG CTCGGTTG CATCCAAATGTACGT TERM 1788 1608349 - 1608336 - G 76 -8.1 -4.0827 | overlap 1608344 1608345 ATAGATGCACATAAA CGCGA CAAG TCGCG CGGCCGAGCAGAGCG Sde_1257 1609783 - 1610436 + | hypothetical protein Sde_1258 1611457 - 1610690 - | IclR family transcriptional regulator TERM 1789 1611647 - 1611635 - g 74 -6.9 -4.24342 | CCCCCGAGCAACAAA CGGCG TAT CACCG AGATGGTTATGTGAT TERM 1790 1611881 - 1611862 - g 71 -3.6 -4.8667 | opp_overlap 1611866, overlap 1611866 GAGAGCGTAGAAAAA TTAATAGG TGAG CCTATTTA CCACACCAGCACTAA Sde_1259 1611601 - 1612362 + | Type I secretion membrane fusion protein, HlyD TERM 1791 1612397 - 1612422 + F 100 -6.8 -6.11392 | overlap 1612387 TTGATGTCAGGCTTG GCCTTGCTCT TTGTTT GGGGCAGGGC TTTTTTTATTTGTTT Sde_1260 1612490 - 1613608 + | Type I secretion outer membrane protein, TolC Sde_1261 1614386 - 1613613 - | VCBS TERM 1792 1614010 - 1614028 + g 72 -6.6 -4.25052 | TCTTCGTTAAATAGT GCTTCGCC TTC GGTGATGC TTATTCTTTTACTAT Sde_1262 1616052 - 1614478 - | tryptophan halogenase, putative TERM 1793 1615010 - 1614997 - G 84 -8.1 -4.57073 | TAGCGGCTCTAAAAA GCCTG CAGA CAGGC CAATTGCCACACAAT TERM 1794 1616231 - 1616266 + r 86 -10.4 -3.76176 | opp_overlap 1616235, overlap 1616232 1616235 1616259 GTTGCTAATAGGTTA TTAACTGGGGCCACTG AATA CTGTGCCCCCAGTTAC TTATTGGTAAATTTA TERM 1795 1616232 - 1616265 + r 95 -13.9 -2.84982 | opp_overlap 1616235, overlap 1616231 1616235 1616259 TTGCTAATAGGTTAT TAACTGGGGCCACTG AATA CTGTGCCCCCAGTTA CTTATTGGTAAATTT TERM 1796 1616262 - 1616235 - R 79 -11.2 -3.18735 | opp_overlap 1616232 1616231 1616235 1616259 CTAATAGGTTATTAA CTGGGGCCACTG AATA CTGTGCCCCCAG TTACTTATTGGTAAA TERM 1797 1616235 - 1616262 + r 83 -11.2 -3.56142 | opp_overlap 1616235, overlap 1616232 1616231 1616259 CTAATAGGTTATTAA CTGGGGCCACTG AATA CTGTGCCCCCAG TTACTTATTGGTAAA Sde_1263 1619058 - 1616296 - | TonB-dependent receptor TERM 1798 1619425 - 1619467 + r 78 -9.3 -3.66654 | gap 1, opp_overlap 1619431, overlap 1619431 TTTATATAAAGAGTT GTAATACCCAGCGCTTGT AAAGATGA ACAAGCGCTGGGT-TAGC TTTCACATTACGCTA TERM 1799 1619462 - 1619431 - R 100 -16 -3.07029 | opp_overlap 1619425 1619431 TAAAGAGTTGTAATA CCCAGCGCTTGT AAAGATGA ACAAGCGCTGGG TTAGCTTTCACATTA TERM 1800 1619431 - 1619462 + r 100 -16 -3.29211 | opp_overlap 1619431, overlap 1619425 TAAAGAGTTGTAATA CCCAGCGCTTGT AAAGATGA ACAAGCGCTGGG TTAGCTTTCACATTA Sde_1264 1622287 - 1619516 - | TonB-dependent receptor TERM 1801 1619948 - 1619966 + g 77 -3.8 -5.21709 | CAATTCCCAGCCATC TACCAATG ATT CGTCGGTA TTTTTTGGTGTGGCA Sde_1265 1623587 - 1622712 - | hypothetical protein Sde_1266 1624911 - 1623613 - | alanyl-tRNA synthetase class IIC Sde_1267 1625440 - 1624922 - | aspartate kinase, monofunctional class Sde_1268 1626429 - 1625446 - | carbon storage regulator TERM 1802 1625991 - 1625974 - G 82 -6.9 -4.77567 | overlap 1625976 ATTTGTAGAATAAAA GCTGCGG CTAC CCGCATC GAAATAGCCAAGGCC Sde_1269 1627343 - 1626453 - | 2-keto-3-deoxygluconate kinase TERM 1803 1628313 - 1628295 - g 87 -9.6 -4.24606 | opp_overlap 1628304 1628305, overlap 1628302 1628303 AATGCACATCGAAAA TGCAACAG CGG CTGCTGCA GCGTATTTTGGTAAA Sde_1270 1627630 - 1628337 + | GntR family transcriptional regulator TERM 1804 1628385 - 1628422 + T 100 -17.3 -3.50303 | gap 1, opp_overlap 1628398, overlap 1628386 1628387 1628398 1628417 CGTTGTAATCTGTGC GTACACAAAAAAAGCGGC ATT GCCGCTTTTTTTGTG-GC TATTATATTTAGCTG TERM 1805 1628386 - 1628424 + T 100 -12.1 -3.84185 | gap 2, opp_overlap 1628398, overlap 1628385 1628387 1628398 1628417 GTTGTAATCTGTGCG TA--CACAAAAAAAGCGGC ATT GCCGCTTTTTTTGTGGCTA TTATATTTAGCTGCA TERM 1806 1628387 - 1628421 + T 100 -18.8 -2.69459 | opp_overlap 1628398, overlap 1628385 1628386 1628398 1628417 TTGTAATCTGTGCGT ACACAAAAAAAGCGGC ATT GCCGCTTTTTTTGTGG CTATTATATTTAGCT TERM 1807 1628398 - 1628410 + T 100 -10.5 -5.65177 | opp_overlap 1628398, overlap 1628387 1628385 1628386 GCGTACACAAAAAAA GCGGC ATT GCCGC TTTTTTTGTGGCTAT TERM 1808 1628410 - 1628398 - T 100 -10.5 -5.71712 | opp_overlap 1628398 1628387 1628385 1628386 GCGTACACAAAAAAA GCGGC ATT GCCGC TTTTTTTGTGGCTAT Sde_1271 1629913 - 1628441 - | D-mannonate oxidoreductase TERM 1809 1629809 - 1629775 - G 73 -9.5 -3.34715 | overlap 1629773 1629776 1629797 CATCGTCGGTAAACA CGGC-TTGGTGCGCTTT GTG AAAG-GCACCAATGCCA ATATGGACTATGCCG TERM 1810 1629808 - 1629776 - G 71 -10.8 -2.60615 | overlap 1629775 1629773 1629797 ATCGTCGGTAAACAC GGC-TTGGTGCGCTTT GTG AAAG-GCACCAATGCC AATATGGACTATGCC TERM 1811 1629824 - 1629854 + g 80 -6 -5.02074 | overlap 1629820 AATATGGACTATGCC GCTGCGGTGTTCGC TTG GCGTGTACTGTGGC TTTTTTACAGGGTCA Sde_1272 1631328 - 1629913 - | glucuronate isomerase TERM 1812 1631392 - 1631417 + r 86 -11.9 -3.18452 | opp_overlap 1631390 1631393 TTAAATTGTAAGAGG AGGTGATGGCA TGCT TGCCATCACCA TTGCGTTACAGTACT TERM 1813 1631416 - 1631393 - R 100 -15.4 -2.7676 | opp_overlap 1631392, overlap 1631390 TAAATTGTAAGAGGA GGTGATGGCA TGCT TGCCATCACC ATTGCGTTACAGTAC Sde_1273 1632666 - 1631473 - | mannonate dehydratase TERM 1814 1631755 - 1631740 - G 79 -9 -4.08945 | ATCAGCTTCGTAAAA CGAACC ATCT GGTTCG CGCTTAACGTTACGC TERM 1815 1632978 - 1632998 + H 91 -10.5 -4.12475 | GTGATATTATGATTA TTGGTAGGG TTG CCTTACCAA TTTATCTGGTGTATG TERM 1816 1633206 - 1633228 + H 81 -12 -2.51413 | opp_overlap 1633205, overlap 1633205 1633203 1633202 1633215 TCTAATTCAGGTAAC TCGGCAGCTG TAA TAGCTGCCGG CTCTATTACTTAGTA TERM 1817 1633374 - 1633408 + H 84 -11.5 -3.21924 | overlap 1633379 GAGCGATGTTGAACG CTAAGCGCACTCGGC CACAA GCTGGGTGTGTTTAG TATTCTAAAAAATAG TERM 1818 1633379 - 1633403 + H 74 -7.8 -3.97088 | overlap 1633374 ATGTTGAACGCTAAG CGCACTCGGC CACAA GCTGGGTGTG TTTAGTATTCTAAAA TERM 1819 1633569 - 1633582 + G 70 -2.3 -5.00616 | overlap 1633565 GTTATGCAGCAGGGC GCTGG TGCG TCGGC TTTTTTGCCAGACGA Sde_1274 1633449 - 1634585 + | Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Sde_1275 1634582 - 1634875 + | pyruvate kinase Sde_1276 1634875 - 1636350 + | response regulator receiver domain-containing protein TERM 1820 1636828 - 1636818 - f 84 -2.6 -5.60864 | CACATACTAAAAAAA TATT ACA AATA TTGGGGAATGCATGA TERM 1821 1637576 - 1637558 - g 73 -7.4 -4.07687 | opp_overlap 1637557, overlap 1637559 AGTTGCGCCCTAAAA TTTTGCGC GAT GCGCAAAG CTTGGTAAGCGAAAC TERM 1822 1637575 - 1637559 - g 75 -10.9 -3.04398 | opp_overlap 1637557, overlap 1637558 GTTGCGCCCTAAAAT TTTGCGC GAT GCGCAAA GCTTGGTAAGCGAAA Sde_1277 1636840 - 1637919 + | fructose-bisphosphate aldolase TERM 1823 1638666 - 1638692 + G 100 -9.5 -4.96848 | gap 1 CTATGGTTGGCGATG TG-CACCGCGTA TTAA TGCGCGGTGGCA TTTTTATGTACCCAA Sde_1278 1637948 - 1638916 + | D-fructose 1,6-bisphosphatase TERM 1824 1638957 - 1638972 + T 100 -6.8 -5.88197 | opp_overlap 1638957 AGTAAACTTTTAGAA CCCGCT TTTT AGTGGG TTTTTTTATGTTTGC TERM 1825 1639060 - 1639038 - T 100 -9.8 -5.68489 | TAGAAGAATAAAAAA GCAACCGGCA TTA CACCGGCTGC AAAGAGGATTATAGC TERM 1826 1639163 - 1639132 - T 100 -10.2 -5.28414 | overlap 1639133 1639134 1639136 TAACAAAGAGAAAAA TTGAGGTTGAGCTA AATT TAGCTCAACCTCGC ATACACTTAGAAAGT TERM 1827 1639162 - 1639133 - T 100 -13.7 -3.74608 | overlap 1639132 1639134 1639136 AACAAAGAGAAAAAT TGAGGTTGAGCTA AATT TAGCTCAACCTCG CATACACTTAGAAAG TERM 1828 1639161 - 1639134 - T 100 -17.2 -2.82325 | overlap 1639133 1639132 1639136 ACAAAGAGAAAAATT GAGGTTGAGCTA AATT TAGCTCAACCTC GCATACACTTAGAAA TERM 1829 1639159 - 1639136 - T 100 -14 -2.93365 | overlap 1639134 1639133 1639132 AAAGAGAAAAATTGA GGTTGAGCTA AATT TAGCTCAACC TCGCATACACTTAGA TERM 1830 1639165 - 1639181 + T 72 -8.1 -3.78409 | TAGCTCAACCTCGCA TACACTT AGA AAGTGTA TTTGGCTTGCATTAC Sde_1279 1642142 - 1639170 - | rhodanese-like protein Sde_1280 1643174 - 1642344 - | 5-keto-4-deoxyuronate isomerase Sde_1281 1644469 - 1643219 - | hypothetical protein TERM 1831 1644570 - 1644552 - H 75 -10.4 -2.83566 | opp_overlap 1644551 1644543 1644552 1644569, overlap 1644551 1644545 ATACTATATTGAAAT TGGTAATG CCA CATTACCA CTTTAAAAGTTTAGG TERM 1832 1644552 - 1644570 + H 75 -10.4 -2.7806 | opp_overlap 1644552 1644551 1644545, overlap 1644551 1644543 1644569 ATACTATATTGAAAT TGGTAATG CCA CATTACCA CTTTAAAAGTTTAGG TERM 1833 1644995 - 1644978 - g 72 -4.7 -4.63218 | opp_overlap 1644991, overlap 1644979 TTCGCTCCAATAAAA TGCGCCC AGAA GAGCGCG CGAGTGCTATTCCGC TERM 1834 1645308 - 1645292 - g 71 -3.7 -4.74801 | overlap 1645295 GAAGGGCACGAAAAA GAAGTAA TGC TTACTGC CCACCGCAAATTCGA Sde_1282 1644719 - 1646002 + | hypothetical protein Sde_1283 1646062 - 1646838 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 1835 1646821 - 1646851 + F 76 -9.7 -3.33261 | gap 1 ATGTTGGTAGATGGT GGTTGGATGGCGCG TTAA CGCGCCG-CAAACC TTATACAGATTAAAG TERM 1836 1647770 - 1647759 - g 74 -5.8 -4.67168 | AAAAATTGCTAAAAA CGCT ATAA AGCG AGCTCAAAAACGATT Sde_1284 1646875 - 1648215 + | hypothetical protein TERM 1837 1648264 - 1648293 + G 71 -7.9 -4.00868 | gap 1, overlap 1648267 TATTTTTATTGTTCG TAAGCCTCTTGCGT GGT GCGCAGG-GGCTTG TTTAATTGTGGCTGC TERM 1838 1648267 - 1648290 + G 73 -7.4 -4.12296 | gap 1, overlap 1648264 TTTTATTGTTCGTAA GCCTCTTGCGT GGT GCGCAGG-GGC TTGTTTAATTGTGGC Sde_1285 1648241 - 1650715 + | Beta-galactosidase/beta-glucuronidase-like TERM 1839 1650692 - 1650736 + T 73 -8.7 -3.53563 | opp_overlap 1650716, overlap 1650697 1650709 1650727 GTAAAAGGGGTGTAT TTAAACGTTGATGCGAAGCAG TAA CTGCTTTGCAATGGGGTTTAA TTTGAGCACCCATAT TERM 1840 1650804 - 1650779 - T 100 -11.9 -5.43414 | opp_overlap 1650779 ATCAGAGATAAAAAA GCCCCAGCTAA ATAG TTAGTTGGGGC TTTTTATTTGTACTG TERM 1841 1650779 - 1650804 + T 100 -14.1 -5.40464 | opp_overlap 1650779 ATCAGAGATAAAAAA GCCCCAGCTAA ATAG TTAGTTGGGGC TTTTTATTTGTACTG Sde_1286 1651275 - 1650835 - | hypothetical protein Sde_1287 1651440 - 1651940 + | CinA-like TERM 1842 1652671 - 1652656 - g 73 -4 -4.87626 | opp_overlap 1652657, overlap 1652657 GGGCAACATTAAAAA CGCTAA CTGT TTAGCA ATTTTTATTAACCAA Sde_1288 1652108 - 1653154 + | RecA protein TERM 1843 1653252 - 1653220 - g 93 -9.8 -4.56597 | gap 1 CCCCTCTGTTAAAAA TGCT-GCGCTAGGCC TATT GGCCAGGCGCGAGCA CAGCGAGTATGAGTT Sde_1289 1653197 - 1653643 + | recX protein Sde_1290 1654052 - 1653717 - | hypothetical protein TERM 1844 1655358 - 1655343 - g 79 -3.2 -5.40474 | overlap 1655345 ATCCGCCCAAAAAAA TGCCAC TATG GTGGAA GCTATTACTAATTTG Sde_1291 1654333 - 1656468 + | 3-hydroxybutyrate dehydrogenase TERM 1845 1657566 - 1657536 - g 75 -11.2 -2.96216 | TTCGACCAGCAGATA TTGGCTATTTGCAC CCA GGGCAAAAAGCCAA AGTGAAGTTTTCTGC Sde_1292 1656458 - 1657843 + | HlyD family secretion protein TERM 1846 1658411 - 1658431 + G 87 -10.5 -4.09685 | overlap 1658412 ACTAGCTATTCAGGC TCGTCAAAC AGT GTTTGACGG TTTTGCAACCTCGGC TERM 1847 1658412 - 1658430 + G 78 -11.8 -3.05597 | overlap 1658411 CTAGCTATTCAGGCT CGTCAAAC AGT GTTTGACG GTTTTGCAACCTCGG TERM 1848 1659240 - 1659229 - g 74 -3.6 -4.94992 | CTAAAGCGACAAAAA CGGC CTAT GCCA AGCAGTTTAATATTG Sde_1293 1658124 - 1659416 + | Poly(R)-hydroxyalkanoic acid synthase, class I TERM 1849 1662037 - 1662015 - g 82 -12 -3.3506 | opp_overlap 1662012 1662010 TCCAAATGCCTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1850 1662346 - 1662324 - g 82 -12 -3.3506 | opp_overlap 1662321 1662318 TCCAAATGCTTACAA CGCTTTAGCC GTT GGCGAAAGCG AAGTCATTACCTACA TERM 1851 1662964 - 1662942 - g 82 -12 -3.3506 | opp_overlap 1662939 1662936 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTATA TERM 1852 1663273 - 1663251 - g 82 -12 -3.3506 | opp_overlap 1663245 CCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTGATTACCTACA TERM 1853 1663582 - 1663560 - g 82 -12 -3.452 | opp_overlap 1663557 1663554, overlap 1663551 TCCAAATACTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1854 1663891 - 1663869 - g 82 -12 -3.3506 | opp_overlap 1663866 1663863 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTACA TERM 1855 1664200 - 1664178 - g 82 -12 -3.3506 | opp_overlap 1664175 1664172 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTACA TERM 1856 1664928 - 1664904 - g 100 -15.1 -3.30441 | CATCACCGGTGATAA CGCAGCACCTA CAG TAAGTGCTGCG GTAACGAGCAGTGCA TERM 1857 1665127 - 1665105 - g 82 -12 -3.33261 | opp_overlap 1665102 1665099 CCCTAATGCTTATAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTACA TERM 1858 1665546 - 1665522 - g 100 -15.1 -3.30441 | CATCACCGGTGATAA CGCAGCACCTA CAG TAAGTGCTGCG GTAACGAGCAGTGCA TERM 1859 1665745 - 1665723 - g 82 -12 -3.33261 | opp_overlap 1665720 1665717 CCCTAATGCTTATAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1860 1666054 - 1666032 - g 82 -12 -3.3506 | opp_overlap 1666029 1666026 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTACA TERM 1861 1666981 - 1666959 - g 82 -12 -3.3506 | opp_overlap 1666956 TCCAAATGCCTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTTATTACTTATA TERM 1862 1667290 - 1667268 - g 82 -12 -3.3506 | opp_overlap 1667265 1667262 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1863 1667599 - 1667577 - g 82 -12 -3.452 | opp_overlap 1667574 1667571, overlap 1667568 TCCAAATACTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1864 1667823 - 1667845 + G 76 -8.4 -4.02424 | CCTTGTGCTCGATAG CGGTGATGCT TCA GGCATAACCG TTTCTGGTAATTCAT TERM 1865 1667908 - 1667886 - g 82 -12 -3.3506 | opp_overlap 1667883 1667880 TCCAAATGCTTACAA CGCTTTGGCC ACT GGCGAAAGCG AAGTCATTACCTACA TERM 1866 1668217 - 1668195 - g 82 -12 -3.3506 | opp_overlap 1668192 1668189 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1867 1668526 - 1668504 - g 82 -12 -3.3506 | opp_overlap 1668501 1668499 TCCAAATGCCTACAA CGCTTTGGCC TCT GGCGAAAGCG AAGTCATTACCTACA TERM 1868 1669453 - 1669431 - g 82 -12 -3.3506 | opp_overlap 1669428 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTTATTACTTATA TERM 1869 1669840 - 1669820 - g 71 -7.5 -3.86822 | GAAGTGTTGCACAAA CCGCGACGA TCA CCATCACGG GCTCAAATGATGCGC TERM 1870 1670071 - 1670049 - g 82 -12 -3.3506 | opp_overlap 1670046 1670044, overlap 1670041 TCCAAATGCCTACAA CGCTTTAGCC GTT GGCGAAAGCG AAGTCATTACCTACA TERM 1871 1670380 - 1670358 - g 82 -12 -3.3506 | opp_overlap 1670355 1670352 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1872 1670689 - 1670667 - g 82 -12 -3.3506 | opp_overlap 1670664 1670661 TCCAAATGCCTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTGATTACCTATA TERM 1873 1670998 - 1670976 - g 82 -12 -3.3506 | opp_overlap 1670973 1670970 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTACA TERM 1874 1671076 - 1671056 - g 71 -7.5 -3.86822 | GAAGTGTTGCACAAA CCGCGACGA TCA CCATCACGG GCTCAAATGATGCGC TERM 1875 1671307 - 1671285 - g 82 -12 -3.3506 | opp_overlap 1671282 1671280, overlap 1671277 TCCAAATGCCTACAA CGCTTTAGCC GTT GGCGAAAGCG AAGTCATTACCTACA TERM 1876 1671616 - 1671594 - g 82 -12 -3.3506 | opp_overlap 1671591 1671588 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1877 1671925 - 1671903 - g 82 -12 -3.3506 | opp_overlap 1671900 1671898, overlap 1671895 TCCAAATGCCTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1878 1672234 - 1672212 - g 82 -12 -3.3506 | opp_overlap 1672209 1672206 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTATA TERM 1879 1673161 - 1673139 - g 82 -12 -3.3506 | opp_overlap 1673136 TCCAAATGCCTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTTATTACTTATA TERM 1880 1673470 - 1673448 - g 82 -12 -3.3506 | opp_overlap 1673445 1673442 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1881 1673779 - 1673757 - g 82 -12 -3.3506 | opp_overlap 1673754 1673752 TCCAAATGCCTACAA CGCTTTGGCC TCT GGCGAAAGCG AAGTCATTACCTACA TERM 1882 1674088 - 1674066 - g 82 -12 -3.3506 | opp_overlap 1674063 1674060 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1883 1674397 - 1674375 - g 82 -12 -3.3506 | opp_overlap 1674372 1674370 TCCAAATGCCTACAA CGCTTTGGCC TCT GGCGAAAGCG AAGTCATTACCTACA TERM 1884 1675324 - 1675302 - g 82 -12 -3.3506 | opp_overlap 1675299 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTTATTACTTATA TERM 1885 1675711 - 1675691 - g 71 -7.5 -3.86822 | GAAGTGTTGCACAAA CCGCGACGA TCA CCATCACGG GCTCAAATGATGCGC TERM 1886 1675942 - 1675920 - g 82 -12 -3.3506 | opp_overlap 1675917 1675915, overlap 1675912 TCCAAATGCCTACAA CGCTTTAGCC GTT GGCGAAAGCG AAGTCATTACCTACA TERM 1887 1676251 - 1676229 - g 82 -12 -3.3506 | opp_overlap 1676226 1676223 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1888 1676560 - 1676538 - g 82 -12 -3.3506 | opp_overlap 1676535 1676532 TCCAAATGCCTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTGATTACCTACA TERM 1889 1676869 - 1676847 - g 82 -12 -3.3506 | opp_overlap 1676844 1676841 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTATA TERM 1890 1677796 - 1677774 - g 82 -12 -3.3506 | opp_overlap 1677771 1677768 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1891 1678105 - 1678083 - g 82 -12 -3.3506 | opp_overlap 1678080 1678077 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTATA TERM 1892 1678723 - 1678701 - g 82 -12 -3.3506 | opp_overlap 1678698 1678695 TCCAAATGCTTACAA CGCTTTAGCC TCA GGCGAAAGCG AAGTCATTACCTACA TERM 1893 1679341 - 1679319 - g 82 -12 -3.3506 | opp_overlap 1679316 1679313 TCCAAATGCTTACAA CGCTTTGGCC GTT GGCGAAAGCG AAGTCATTACCTATA TERM 1894 1679650 - 1679628 - g 82 -12 -3.452 | opp_overlap 1679625 1679622, overlap 1679619 TCCAAATACTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTCATTACCTACA TERM 1895 1679874 - 1679896 + G 76 -8.4 -4.02424 | CCTTGTGCTCGATAG CGGTGATGCT TCA GGCATAACCG TTTCTGGTAATTCAT TERM 1896 1679959 - 1679937 - g 82 -12 -3.3506 | opp_overlap 1679934 1679931 TCCAAATGCTTACAA CGCTTTGGCC ACT GGCGAAAGCG AAGTCATTACCTACA TERM 1897 1680268 - 1680246 - g 82 -12 -3.3506 | opp_overlap 1680243 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTTATTACTTATA TERM 1898 1680577 - 1680555 - g 82 -12 -3.3506 | opp_overlap 1680552 1680550 TCCAAATGCCTACAA CGCTTTGGCC TCT GGCGAAAGCG AAGTCATTACCTACA TERM 1899 1681504 - 1681482 - g 82 -12 -3.3506 | opp_overlap 1681479 TCCAAATGCTTACAA CGCTTTGGCC GCT GGCGAAAGCG AAGTTATTACTTATA Sde_1294 1659454 - 1684419 + | polyhydroxyalkanoate synthesis repressor PhaR Sde_1295 1685469 - 1684489 - | hypothetical protein TERM 1900 1684568 - 1684558 - G 80 -6.8 -4.59109 | overlap 1684565 CATATTCTTTAAAAA CGCA CAA TGCG ATCCGCAGTCTGCAG Sde_1296 1685641 - 1686471 + | M24/M37 family peptidase Sde_1297 1686568 - 1686759 + | acetoacetyl-CoA reductase TERM 1901 1686760 - 1686749 - f 74 -4.4 -5.06961 | AGGAAGAAAAAGAAA GCTA TAAA TAGC GGAGGATGTTATGAG Sde_1298 1686771 - 1687127 + | thioredoxin Sde_1299 1687182 - 1689809 + | alanyl-tRNA synthetase Sde_1300 1690011 - 1691237 + | aspartate kinase Sde_1301 1691477 - 1691671 + | carbon storage regulator TERM 1902 1691929 - 1691968 + T 100 -14.5 -2.92326 | gap 1, opp_overlap 1691939, overlap 1691939 CTCCGCCATTATTTA G-TACAAAAAAGCCCCGC TATAT GCGGGGCTTTTTTGTTTC TGCTGTTTGTACTTC TERM 1903 1691939 - 1691957 + T 100 -13.1 -5.73978 | opp_overlap 1691939, overlap 1691929 ATTTAGTACAAAAAA GCCCCGC TATAT GCGGGGC TTTTTTGTTTCTGCT TERM 1904 1691957 - 1691939 - T 100 -13.1 -5.31877 | opp_overlap 1691939 1691929 ATTTAGTACAAAAAA GCCCCGC TATAT GCGGGGC TTTTTTGTTTCTGCT TERM 1905 1691991 - 1692001 + T 71 -3.2 -5.04356 | TGTACTTCTATTGGG GCTT TCA GAGC TTTTTGGTTCTTTCG mgsA 1692459 - 1691995 - | methylglyoxal synthase TERM 1906 1692749 - 1692767 + H 100 -14.6 -5.81412 | opp_overlap 1692749 TCTAAAGACGAAAAA GCCTGTCC ATT GGACAGGC TTTTTTTTGCCTAAA TERM 1907 1692767 - 1692749 - H 100 -14.6 -4.93696 | opp_overlap 1692749 TCTAAAGACGAAAAA GCCTGTCC ATT GGACAGGC TTTTTTTTGCCTAAA TERM 1908 1692792 - 1692804 + H 80 -3.5 -5.40873 | CCTAAAATTTTTTGC TTAAT TAA ATTAA TTTTATTTTTCTGTT TERM 1909 1693299 - 1693315 + G 74 -3.7 -4.96848 | overlap 1693302 AAAAGTCGATCACGA TATTAGC CCT GCTATTA TTTTTATGTGCGGCA TERM 1910 1693302 - 1693312 + G 74 -5.4 -4.58943 | overlap 1693299 AGTCGATCACGATAT TAGC CCT GCTA TTATTTTTATGTGCG Sde_1303 1693265 - 1695028 + | gamma-glutamyltransferase 1 TERM 1911 1695038 - 1695077 + T 71 -8.6 -3.45634 | gap 2, opp_overlap 1695029 1695038 CAATAAGCTTTAAAA GCCCAGAGCGCGGCGTAG AGCTTG CT-CGTCGCGCTC-GCGC TTGATTGCTTCGAAT Sde_1304 1695988 - 1695032 - | RecR protein TERM 1912 1695436 - 1695456 + g 76 -8.3 -4.07687 | opp_overlap 1695427, overlap 1695428 TATAATGCCAGTAGG CTGGTGGTT GGT AACCGTCAG TTTTCGAGCGGGCGT TERM 1913 1696115 - 1696127 + H 86 -10.5 -3.89704 | CGTCTTTGGGACTTG CCCCC GAG GGGGG TTATTAATTATCTTA TERM 1914 1696515 - 1696539 + G 74 -5.7 -4.68506 | CTTGGATTTAATGTT TACGGGCATGG GTA CTGTGTTCGTA TTTTTAACATTGCTT Sde_1305 1696474 - 1696716 + | ribonuclease D TERM 1915 1698087 - 1698065 - g 89 -9.3 -4.56775 | AGCGGCGGCTAAAAA TATCACCTT AGCTA AAGGTGATA ATCAAATCGATGATG Sde_1306 1696785 - 1698575 + | pyruvate carboxylase subunit B Sde_1307 1698637 - 1699899 + | oxaloacetate decarboxylase TERM 1916 1699907 - 1699936 + F 85 -5.6 -5.15969 | gap 1, opp_overlap 1699908 1699909, overlap 1699908 1699909 GTATGTAATTTCAAA ACTGGCG-CGCCC AATGA GGGCGTCGCCACC TTTTTTGCGTTAAGC TERM 1917 1699908 - 1699935 + F 75 -9.1 -3.68859 | gap 1, opp_overlap 1699908 1699909, overlap 1699907 1699909 TATGTAATTTCAAAA CTGGCG-CGCCC AATGA GGGCGTCGCCAC CTTTTTTGCGTTAAG TERM 1918 1699935 - 1699908 - f 83 -9.1 -4.19953 | gap 1, opp_overlap 1699908 1699907 1699909, overlap 1699909 TATGTAATTTCAAAA CTGGCG-CGCCC AATGA GGGCGTCGCCAC CTTTTTTGCGTTAAG TERM 1919 1699909 - 1699934 + F 89 -12.6 -2.80592 | gap 1, opp_overlap 1699908 1699909, overlap 1699908 1699907 ATGTAATTTCAAAAC TGGCG-CGCCC AATGA GGGCGTCGCCA CCTTTTTTGCGTTAA TERM 1920 1699934 - 1699909 - f 93 -12.6 -3.1149 | gap 1, opp_overlap 1699909 1699908 1699907, overlap 1699908 ATGTAATTTCAAAAC TGGCG-CGCCC AATGA GGGCGTCGCCA CCTTTTTTGCGTTAA TERM 1921 1699946 - 1699970 + F 70 -3.5 -4.88684 | overlap 1699950 1699955 1699957 GCCACCTTTTTTGCG TTAAGCTGGTG CGT CAGCGGCGTAA TTTTGTATTTATCTT Sde_1308 1700097 - 1701539 + | pyruvate kinase TERM 1922 1701570 - 1701587 + T 100 -8.4 -5.64274 | opp_overlap 1701570 CTGTTCTTCCAAAAA GCGGCT CTTTGT AGCCGC TTTTTTTATGGCTGC TERM 1923 1701587 - 1701570 - T 87 -8.4 -4.56597 | opp_overlap 1701570 CTGTTCTTCCAAAAA GCGGCT CTTTGT AGCCGC TTTTTTTATGGCTGC Sde_1309 1702238 - 1701609 - | response regulator receiver domain-containing protein TERM 1924 1702379 - 1702412 + r 89 -7.3 -4.93877 | overlap 1702380 1702382 GTTGTAGCAGGAGGG TGCCGCTAGCGGCTA TGAA TTGCGGCTAGCGTCG TTTTCTTTAATAGAG TERM 1925 1702380 - 1702411 + r 71 -8.6 -3.55603 | overlap 1702379 1702382 TTGTAGCAGGAGGGT GCCGCTAGCGGCTA TGAA TTGCGGCTAGCGTC GTTTTCTTTAATAGA TERM 1926 1702382 - 1702409 + r 76 -9.8 -3.34291 | overlap 1702380 1702379 GTAGCAGGAGGGTGC CGCTAGCGGCTA TGAA TTGCGGCTAGCG TCGTTTTCTTTAATA Sde_1310 1702720 - 1702391 - | hypothetical protein Sde_1311 1702778 - 1703089 + | transcriptional regulator BolA Sde_1312 1703186 - 1704115 + | hypothetical protein TERM 1927 1704192 - 1704143 - f 100 -13.2 -3.98484 | gap 1, opp_overlap 1704155, overlap 1704131 1704130 1704151 1704155 AACTTAATTTATAAA TTAAACAATTAAGCCCCAGCTCG TTATG CGAACTGGGGCTTT-TTATTTAA AGGGATAAGGCCATG TERM 1928 1704185 - 1704151 - f 93 -10.7 -4.18676 | opp_overlap 1704155, overlap 1704143 1704155 TTATAAATTAAACAA TTAAGCCCCAGCTCG TTATG CGAACTGGGGCTTTT TATTTAAAGGGATAA TERM 1929 1704155 - 1704181 + F 100 -14.4 -5.27335 | opp_overlap 1704155 1704151 1704143 AAATTAAACAATTAA GCCCCAGCTCGT TAT GCGAACTGGGGC TTTTTATTTAAAGGG TERM 1930 1704181 - 1704155 - f 100 -15.9 -3.66349 | opp_overlap 1704155, overlap 1704151 1704143 AAATTAAACAATTAA GCCCCAGCTCG TTATG CGAACTGGGGC TTTTTATTTAAAGGG Sde_1313 1704205 - 1704696 + | putative acetyltransferase Sde_1314 1705446 - 1704772 - | TetR family transcriptional regulator Sde_1315 1706846 - 1705479 - | hypothetical protein TERM 1931 1705658 - 1705671 + g 73 -2.3 -5.2189 | overlap 1705659 1705670 CACCGGTAATGTTAA GCAGC CAAA GCTGA TTTTTTAATCGTTCA TERM 1932 1706018 - 1706046 + g 71 -9.5 -3.22521 | CATTGGTGTTGCTAT CGGCGGCAATAAT AGC AATGTCGCCGCCG TTAAATTGATATGCC Sde_1316 1707673 - 1706852 - | hypothetical protein TERM 1933 1707411 - 1707430 + g 74 -5.7 -4.60487 | TTAACGTCGGCAGGA GTGGTGA AAAAAA TCACCGC TTTTTCAACATCGTC Sde_1317 1710039 - 1707703 - | RND efflux transporter TERM 1934 1709977 - 1709967 - G 74 -6.8 -4.3586 | CGAGGCATATCAAAA TGGC AAT GCCA ATGATCAATGCTAGG Sde_1318 1712675 - 1710240 - | cellobiose phosphorylase TERM 1935 1712147 - 1712187 + g 77 -11.1 -3.25986 | opp_overlap 1712146 1712145, overlap 1712184 GATAAATAACAGAGT CTTCCACCTCTACTTCACC GGT GGAGAAGTTGCGTTGGAAG TTGGTCATGTCATCT TERM 1936 1712979 - 1712967 - H 77 -10.5 -3.14132 | CTTGCTGGGTAGGAA GCCGC TTA GCGGC TAAGCCTAACCGGCT TERM 1937 1713626 - 1713641 + G 82 -7.6 -4.72272 | AGGTGTCTAGAGTGT TAGGTG GTCA CACCTA TTTTTACTCGGCAAC Sde_1319 1713259 - 1714068 + | hypothetical protein Sde_1320 1714290 - 1714889 + | TetR family transcriptional regulator TERM 1938 1714928 - 1714907 - f 90 -5.8 -5.45652 | opp_overlap 1714912 ATTTTTAATAAAAAA GCAAACCG GTTGGT CGGTATGC TCGTCCTTAACCATT TERM 1939 1716042 - 1716055 + G 76 -2.3 -5.28176 | overlap 1716043 TTTCTTACTTCGCTT ACCAC TGCG GTGGG TTTTTTATCGATGAA TERM 1940 1716469 - 1716487 + G 79 -7.5 -4.41206 | TGAGTAACCCTGCCT TTTTGCG CGATA CGCAAAA TTTTGTGGAGTGGTT TERM 1941 1717062 - 1717079 + G 74 -5.5 -4.67353 | GCCTTAGGTATTGTG GTGGACG ATAG CGTGCAC TTTTTAAGTAAATAC Sde_1321 1715022 - 1717424 + | RND efflux transporter TERM 1942 1717470 - 1717481 + G 77 -3.6 -5.14563 | overlap 1717476 GGCGTTAACGTTCAT GGTG GTGT CGCC TTTTTTGCTGGCCAA Sde_1322 1717417 - 1718217 + | von Willebrand factor, type A TERM 1943 1718236 - 1718257 + G 100 -7.9 -5.85425 | opp_overlap 1718228 1718238, overlap 1718238 TGATAAAGCCCTTTA AAGGCCGGC TTAT GCCGGTCTC TTTTTTGTTTGTTTC TERM 1944 1718238 - 1718255 + G 93 -10.5 -4.51345 | opp_overlap 1718228 1718238, overlap 1718236 ATAAAGCCCTTTAAA GGCCGGC TTAT GCCGGTC TCTTTTTTGTTTGTT TERM 1945 1718999 - 1718982 - g 75 -9.9 -3.5511 | overlap 1718980 TTTTACGCACAAATA CGCCAAA CTGG TTTGGCG GTTCAGGCGACCGTA Sde_1323 1718220 - 1719443 + | hypothetical protein Sde_1324 1719603 - 1720385 + | D-beta-hydroxybutyrate dehydrogenase Sde_1325 1720464 - 1720706 + | Sodium/sulphate symporter TERM 1946 1721921 - 1721906 - g 73 -4 -4.77925 | overlap 1721907 AAAAAACCGTAAAAA CCAAAG GCTA CTTTGA CGGCCGAGTGCTGGC TERM 1947 1722265 - 1722276 + G 71 -7.2 -4.05446 | overlap 1722264 GCTAATAATGAAGCC GCGC AAGT GCGC TTTGTGCTTACAGAG TERM 1948 1722508 - 1722493 - g 100 -9 -5.1675 | GTAGGCAGCAAAAAA CACCCA GTAG TGGGTG ATGCGCCGGGAAGCT Sde_1326 1720762 - 1722558 + | polyhydroxyalkanoic acid synthase Sde_1327 1722597 - 1723157 + | histidine kinase Sde_1328 1723307 - 1723621 + | response regulator receiver/GGDEF/EAL domain-containing protein TERM 1949 1723657 - 1723673 + F 100 -11.5 -4.84527 | TTGTCTGATGTTGAA GCCCGGT ACT GCCGGGC TTTTTAATGTCTGGA TERM 1950 1723730 - 1723709 - f 80 -3.8 -5.26918 | gap 1, overlap 1723695 ACATTTTAGAAAAAA CGCACAATT TTTTT AATTG-GCG CCAAAGGGTATTGAT Sde_1329 1723832 - 1724362 + | pilus retraction protein PilT TERM 1951 1724417 - 1724386 - T 91 -8 -4.90266 | gap 1 TGCAGGAAGTAAAAA GCGCAGCTGG-CG TGTATTT CGTCTAGCTGCGC TGTAAGCGGCGAAAG Sde_1330 1725159 - 1724437 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 1952 1725530 - 1725519 - g 72 -5.8 -4.43859 | opp_overlap 1725522 GATAACCCTAGAAAA TGCG CAGG CGCA GCTAATTGAAGAGTC TERM 1953 1725648 - 1725625 - g 88 -8.1 -4.84359 | opp_overlap 1725625 CCAGTGCTAGAAAAA CTGGCCAAC GAGTAT GCCGGCCAG TTTTTATTGGCAAAA TERM 1954 1725625 - 1725648 + G 76 -4.4 -5.06414 | opp_overlap 1725625 CCAGTGCTAGAAAAA CTGGCCAACG AGTA TGCCGGCCAG TTTTTATTGGCAAAA Sde_1331 1725484 - 1726341 + | putative thioredoxin TERM 1955 1726498 - 1726530 + F 100 -11.4 -4.15222 | opp_overlap 1726504 1726505, overlap 1726505 TTCTTATACGTTACC CATAAAGGCCCTCA ACGAG TGAGGGCTTTTACG TTTATTGAGGAAGAT TERM 1956 1726505 - 1726523 + F 100 -10.3 -4.42851 | opp_overlap 1726504 1726505, overlap 1726498 ACGTTACCCATAAAG GCCCTCA ACGAG TGAGGGC TTTTACGTTTATTGA TERM 1957 1726523 - 1726505 - f 76 -10.3 -2.95102 | opp_overlap 1726505 1726498, overlap 1726504 ACGTTACCCATAAAG GCCCTCA ACGAG TGAGGGC TTTTACGTTTATTGA Sde_1332 1726547 - 1727662 + | phosphoserine aminotransferase TERM 1958 1727730 - 1727753 + F 78 -9 -3.86524 | overlap 1727733 TTAGCTACCTAATGT TGAGTGTCTA TTTT TAGACACTTA TTTATAGCCAACTAT TERM 1959 1727733 - 1727750 + F 77 -8.5 -4.06419 | overlap 1727730 GCTACCTAATGTTGA GTGTCTA TTTT TAGACAC TTATTTATAGCCAAC TERM 1960 1727808 - 1727787 - f 100 -14.5 -5.24129 | TTCGCGCATAAAAAA GCCCTAGCA AAGT TGCTAGGGC CCAAACGAAGAAACA TERM 1961 1729111 - 1729101 - g 73 -4.6 -4.89521 | ATATGGTAAATAAAA GCCG TAA CGAC GTGGCGTACAATATT Sde_1333 1728038 - 1729210 + | D-3-phosphoglycerate dehydrogenase Sde_1334 1730474 - 1729491 - | oxidoreductase TERM 1962 1731721 - 1731707 - g 70 -10 -3.05715 | AATGCTGGCATTTAA GCCACA AGG TGTGGC CGATGTGCCTACTCA TERM 1963 1732054 - 1732019 - g 80 -6 -5.02476 | overlap 1732020 AGAGCCTGTAAAAAA GCCCCAAGCTGAGCCT CAAC AGGCTCAGGCAGAGGT GCCCGCAAGTGAGCC TERM 1964 1732053 - 1732020 - g 75 -9.5 -3.60762 | overlap 1732019 GAGCCTGTAAAAAAG CCCCAAGCTGAGCCT CAAC AGGCTCAGGCAGAGG TGCCCGCAAGTGAGC Sde_1335 1730631 - 1732703 + | DNA polymerase III subunits gamma and tau Sde_1336 1732744 - 1733064 + | valyl-tRNA synthetase TERM 1965 1733601 - 1733584 - g 75 -6.3 -4.4715 | gap 1 GCGCAAGGTATAAAA GTGTCGCG TAT CGC-ACAC GGCATACCAATAGGT Sde_1337 1733089 - 1733682 + | recombinational DNA repair protein TERM 1966 1734409 - 1734394 - g 81 -8.2 -4.42788 | overlap 1734384 GCTAACCGCACAAAA GCGCGA TAAA CCGCGC AATAGAATTGTTAAA Sde_1338 1733684 - 1734844 + | ribonuclease D TERM 1967 1735001 - 1734986 - g 72 -3.2 -4.98522 | overlap 1734987 AACGCCAGAGAAAAA GCTTGC GCGT GCAAGT GTAGAAAAAGTTATC Sde_1339 1734834 - 1735109 + | hypothetical protein Sde_1340 1735112 - 1735543 + | hypothetical protein Sde_1341 1735639 - 1735854 + | SlyX TERM 1968 1735927 - 1735943 + F 77 -6.5 -4.71401 | overlap 1735903 1735902 CATTGCCTATTCATA GCTGTGC TAT GTGCAGC TTTTATACTTTTATT TERM 1969 1736192 - 1736177 - f 78 -9 -3.79251 | overlap 1736180 GATGCTACTATTAAA GGAGTG AATA CACTCC CTGGCGTATTAACAC TERM 1970 1736773 - 1736761 - g 100 -9.1 -5.51046 | GAAATAGATAAAAAA CTGGC TAT GCCAG AAATTCGCCAATTGC TERM 1971 1736927 - 1736917 - g 71 -6.8 -4.07885 | opp_overlap 1736917 CAGGGTGTTGCAAAA GCCA TTA TGGC TTATAGCCAAGGGCT Sde_1342 1736251 - 1737174 + | MSHA biogenesis protein MshM Sde_1343 1737171 - 1738811 + | Type II secretory pathway component PulD-like TERM 1972 1739675 - 1739643 - g 70 -4.7 -4.47163 | overlap 1739640 1739654 AATGAAAATAAACAA GCGTTAGCCAATCTC ATT GAGAATGGAAGACGC CAGCGAGAAAAAATA TERM 1973 1739995 - 1739985 - g 79 -2.4 -5.50925 | AAGCAAGATAAAAAA GCCG ACG CTGC GAGTGGTGGTGGCTC Sde_1344 1738815 - 1740740 + | hypothetical protein TERM 1974 1742341 - 1742322 - g 71 -3.4 -4.81359 | opp_overlap 1742323, overlap 1742323 AAGCGAAATAGAAAA CGCCGCGT TAGA ACTCGGCT TTAAAACTATGGCGG Sde_1345 1740751 - 1742442 + | ATPases involved in pili biogenesis, PilB-like TERM 1975 1742793 - 1742781 - g 78 -6.3 -4.62471 | opp_overlap 1742781 TCGAAGGGGGAAAAA CTTTC TCC GAAAG TTTAAAAAACTTTCC Sde_1346 1742450 - 1743652 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 1976 1743696 - 1743718 + G 77 -9.2 -3.9009 | opp_overlap 1743695 1743712 GGGTTTAGAATGGAG GTGTTCGAAT TCA AATCGAACAC TTTATCCGCTCGCTT TERM 1977 1743919 - 1743903 - g 72 -6.5 -4.24002 | overlap 1743904 1743912 CTCGAAAGGCTAAAA GCGCGAA CAT TTCGCGA TGCTAAATATCGGTA TERM 1978 1743918 - 1743904 - g 71 -10 -3.13919 | overlap 1743903 1743912 TCGAAAGGCTAAAAG CGCGAA CAT TTCGCG ATGCTAAATATCGGT Sde_1347 1743690 - 1745312 + | glucose-6-phosphate dehydrogenase TERM 1979 1745638 - 1745648 + G 82 -6.8 -4.89852 | opp_overlap 1745637 AGAAAAGTACAGGAG GGTG AAA CACC TTTTTATCACTATGA Sde_1348 1745344 - 1745919 + | 6-phosphogluconate dehydratase TERM 1980 1746327 - 1746315 - g 75 -6.3 -4.50761 | overlap 1746323 ATCAAGTGAAAGAAA GTTAC GAA GTAAC GGCTCCTAAACCTTT Sde_1349 1745909 - 1746406 + | KDPG and KHG aldolase Sde_1350 1746399 - 1747508 + | hypothetical protein TERM 1981 1747678 - 1747689 + G 71 -3.6 -4.74103 | CTTCTTGGTTATGCT GCCG TAAA TGGC TTTTTACCTTGCCCC Sde_1351 1747531 - 1748172 + | hypothetical protein Sde_1352 1748427 - 1749095 + | hypothetical protein TERM 1982 1749104 - 1749133 + F 88 -9.9 -4.17491 | opp_overlap 1749091 1749106, overlap 1749106 AATTTAATGTGACTA AAGGCGCTGGCCC CTTC GGGTTGGCGCCTG TTTTCGGCCTTTGCT TERM 1983 1749106 - 1749131 + F 100 -12.5 -3.68071 | opp_overlap 1749106, overlap 1749104 TTTAATGTGACTAAA GGCGCTGGCCC CTTC GGGTTGGCGCC TGTTTTCGGCCTTTG Sde_1353 1749290 - 1749667 + | TonB-dependent receptor Sde_1354 1749814 - 1750179 + | hypothetical protein TERM 1984 1750380 - 1750393 + F 76 -8.1 -4.12397 | AAAACGTTTTTTGGG GCGTC TTTG GACGC TTTATGGTTGTATCG TERM 1985 1751085 - 1751074 - g 79 -3 -5.41746 | AACCTGCTAAAAAAA TTGT CCTT ACAA ACCGATGGTATTGCC TERM 1986 1751929 - 1751906 - g 76 -4.6 -5.0925 | CGTCAAAACGAAAAA TGGTTAAGCC CTTA GATTTAACCA AAATGGATACATGGC Sde_1355 1750459 - 1752822 + | hypothetical protein Sde_1356 1754350 - 1752884 - | methyl-accepting chemotaxis sensory transducer TERM 1987 1754080 - 1754098 + g 77 -3.8 -5.1101 | overlap 1754082 CAGGGGCTGCGCTAT TAGCATGA TTT TCGTGCCA TTTTTTGAGTGCTGA TERM 1988 1754991 - 1755014 + G 76 -8.2 -4.16305 | overlap 1754992 TGTGCAAATAAGCAG TGAGCGTTTT GCTG AAAGCGCTCG TTATTATTTGTGGGT TERM 1989 1754992 - 1755013 + G 70 -9.5 -3.08699 | overlap 1754991 GTGCAAATAAGCAGT GAGCGTTTT GCTG AAAGCGCTC GTTATTATTTGTGGG Sde_1357 1754758 - 1755279 + | hypothetical protein TERM 1990 1755309 - 1755295 - T 81 -11.4 -2.84173 | ATACAAGTTATTACA GCCGCT AAA AGCGGC TAGGCGAAATTACAA Sde_1358 1756722 - 1755319 - | helix-turn-helix, AraC type TERM 1991 1756071 - 1756056 - G 78 -5.4 -4.8543 | TAATGGGCACAAAAA GTACCA CAAG CGGTAC GCCCCATTTCATCCA Sde_1359 1758135 - 1756822 - | GAF sensor signal transduction histidine kinase TERM 1992 1759648 - 1759658 + G 74 -6.8 -4.371 | opp_overlap 1759643 GATCGAACAAGTGCC CAGC GCC GCTG TTTTGATATGCTGGA Sde_1360 1758535 - 1760169 + | cellulose binding, type IV TERM 1993 1760321 - 1760305 - g 72 -3 -5.00616 | GTTTGCCCTAAAAAA TACCCA AATAA TGGATA GACCACTCAAGTTTT Sde_1361 1760159 - 1762399 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase TERM 1994 1762416 - 1762457 + T 78 -9.5 -3.65201 | opp_overlap 1762427, overlap 1762418 1762421 1762427 CTTGGCGTGTGTGGT GCCATCCCAAACCAATTAG AATT TTAATTGGTTTGGGTCGTC TTCTTCAGGCTCTTC TERM 1995 1762418 - 1762455 + T 81 -10.7 -3.40052 | opp_overlap 1762427, overlap 1762416 1762421 1762427 TGGCGTGTGTGGTGC CATCCCAAACCAATTAG AATT TTAATTGGTTTGGGTCG TCTTCTTCAGGCTCT TERM 1996 1762421 - 1762452 + T 100 -15.4 -2.85545 | opp_overlap 1762427, overlap 1762418 1762416 1762427 CGTGTGTGGTGCCAT CCCAAACCAATTAG AATT TTAATTGGTTTGGG TCGTCTTCTTCAGGC Sde_1362 1763624 - 1762431 - | Sodium:galactoside symporter Sde_1363 1763868 - 1765190 + | regulatory protein, LacI TERM 1997 1765235 - 1765214 - T 100 -14.5 -2.86164 | opp_overlap 1765209, overlap 1765216 TTTTCAATGATTACA CAGCCTTGC GAGT GCAAGGCTG GCTCAATATGCTCCA TERM 1998 1765233 - 1765216 - T 83 -11.3 -2.98015 | opp_overlap 1765209, overlap 1765214 TTCAATGATTACACA GCCTTGC GAGT GCAAGGC TGGCTCAATATGCTC Sde_1364 1766113 - 1765301 - | TonB-dependent receptor TERM 1999 1765827 - 1765843 + g 79 -4.3 -5.24129 | overlap 1765829 ACAAGCATGGCTAAG TTGCGGG TGC CGCGCGA TTTTTTGTAGCGCAC Sde_1365 1767021 - 1766113 - | putative putrescine transport system permease protein Sde_1366 1768139 - 1767018 - | putative putrescine transport ATP-binding protein TERM 2000 1767494 - 1767512 + g 77 -8.8 -4.00445 | opp_overlap 1767485 GCATAAGCGCTATAC GCGAAGAC ATA GTCATCGC TTCTTCTTGATCGTG TERM 2001 1767582 - 1767599 + g 81 -3.4 -5.39721 | opp_overlap 1767582 GTTCATTAATTCAAA TTGCGT TTTTTC GCGCAA TTTTTTGTCTAGTGC TERM 2002 1768184 - 1768155 - R 73 -7.2 -4.18018 | gap 1, overlap 1768156 CTCTTCCACGTAAAA GTTGCCA-GCCTC ACAGG GAGGCCTGGCAAG GAGTGTTAGCTGTTG TERM 2003 1768183 - 1768156 - R 79 -10.7 -3.10597 | gap 1, overlap 1768155 TCTTCCACGTAAAAG TTGCCA-GCCTC ACAGG GAGGCCTGGCAA GGAGTGTTAGCTGTT Sde_1367 1769309 - 1768212 - | transcription factor jumonji, jmjC Sde_1368 1770260 - 1769823 - | hypothetical protein TERM 2004 1769911 - 1769924 + g 72 -3.1 -5.03747 | AGCTGTTTTCGTTCT CGTTC TTCA GAATG TTTTTTCAAAGCTTT valS 1773214 - 1770446 - | valyl-tRNA synthetase TERM 2005 1773419 - 1773432 + r 82 -6.7 -4.89852 | GTTTAGTTTTCTTCG CGCTT GATT AAGCG TTTTTCTAGGTGTAC Sde_1370 1774473 - 1773406 - | hypothetical protein Sde_1371 1774933 - 1774484 - | DNA polymerase III, chi subunit Sde_1372 1776437 - 1774935 - | PepA aminopeptidase TERM 2006 1774972 - 1774989 + g 74 -5.5 -4.57073 | opp_overlap 1774965, overlap 1774965 ACAAGCAAGCTTACT GGGCG GCCAGTAG CGCCC TTTTTAGCGCCGCTG TERM 2007 1775034 - 1775045 + g 73 -2.2 -5.21709 | GGCAATATCCAAGTG TGCC CAAG GGTA TTTTTTGGTGTAGCG Sde_1373 1776964 - 1778046 + | queuine tRNA-ribosyltransferase TERM 2008 1778081 - 1778099 + G 71 -8 -3.91564 | opp_overlap 1778078, overlap 1778080 AGGCCATACAATTGC CGCCGCCG TGG CGACGGTG TTATTGGTTATTCTC Sde_1374 1778043 - 1779101 + | SecD export membrane protein TERM 2009 1779115 - 1779146 + T 79 -8.3 -4.0847 | gap 1 AGCTATTGTTAATCG CTAATCACTAG-TA GTTAG TAGCTAGTGATTAG TTATTGTTATCTATA Sde_1375 1779630 - 1779157 - | SecF protein TERM 2010 1779419 - 1779408 - G 76 -2.2 -5.30686 | gap 1 AATAGCTATAAAAAA GC-GC CAA GCTGC AAAACCAACCTAATT TERM 2011 1779453 - 1779441 - G 93 -9.1 -4.75776 | opp_overlap 1779439 1779446 1779449 AACCTAATTGAAAAA GTGGG CCG CCCAC GGTGGGTTGGTAGTC Sde_1376 1780215 - 1779712 - | PAS/PAC sensor hybrid histidine kinase TERM 2012 1779897 - 1779910 + g 71 -3.8 -4.75309 | overlap 1779901 TATTTAGTGCTTCAT CACC CGAATA GGTG TTTTGTTCGCTTTCA TERM 2013 1779928 - 1779940 + g 73 -7.7 -4.183 | TTGTTCGCTTTCAAT CAACC AGC GGTTG TTTATTAAGCGTTGG Sde_1377 1781383 - 1780499 - | adenylate cyclase Sde_1378 1782222 - 1781443 - | RNA methyltransferase TrmH, group 1 TERM 2014 1781705 - 1781733 + g 73 -2.5 -5.23292 | gap 1 CCCACGTTAATTGTA TCT-TCTCCTTC CACTTT GAAGGCGAGAGA TTTTATTTTGTGTGG TERM 2015 1782290 - 1782323 + r 100 -16.9 -3.48807 | opp_overlap 1782292 1782299, overlap 1782292 1782299 ACAGGAGCTGAATGC AACAAAAAAGGGGGC CGAA GCCCCCTTTTTTGTG TTGTGCGTTTAATGC TERM 2016 1782321 - 1782292 - R 100 -19.5 -3.18452 | opp_overlap 1782290 1782292 1782299, overlap 1782299 AGGAGCTGAATGCAA CAAAAAAGGGGGC CGAA GCCCCCTTTTTTG TGTTGTGCGTTTAAT TERM 2017 1782292 - 1782321 + r 100 -19.5 -3.31199 | opp_overlap 1782292 1782299, overlap 1782290 1782299 AGGAGCTGAATGCAA CAAAAAAGGGGGC CGAA GCCCCCTTTTTTG TGTTGTGCGTTTAAT TERM 2018 1782299 - 1782314 + r 100 -11.8 -5.5208 | opp_overlap 1782292 1782299, overlap 1782292 1782290 GAATGCAACAAAAAA GGGGGC CGAA GCCCCC TTTTTTGTGTTGTGC TERM 2019 1782314 - 1782299 - R 100 -11.8 -5.5074 | opp_overlap 1782299 1782292 1782290, overlap 1782292 GAATGCAACAAAAAA GGGGGC CGAA GCCCCC TTTTTTGTGTTGTGC Sde_1379 1783376 - 1782369 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2020 1782724 - 1782745 + g 70 -5.1 -4.42238 | gap 1, opp_overlap 1782724 1782723 1782719 TCTGGAATAACTAAG CCGATTGCAG CAG CTGCAC-CGG TTTTAGTTGGGATCA TERM 2021 1785235 - 1785223 - g 76 -4.9 -4.85894 | AAAGTAAACATAAAA TTTTC CAA GAAAA CCACGAAAATCACGC Sde_1380 1784154 - 1785629 + | glucose-6-phosphate 1-dehydrogenase TERM 2022 1785648 - 1785663 + F 100 -10.4 -5.17786 | opp_overlap 1785648 TCGCGAACGATTAAA GGGGCA TAAG TGCCCC TTTTTACTTTTCTTA TERM 2023 1785663 - 1785648 - f 86 -10.4 -3.84246 | opp_overlap 1785648 TCGCGAACGATTAAA GGGGCA TAAG TGCCCC TTTTTACTTTTCTTA TERM 2024 1787027 - 1787007 - g 70 -4.8 -4.41047 | gap 1 AGGGCGTAATCAAAA TTTCT-GCG GTAG CGCCAGAAA ATCGCGTTGTTGAGG Sde_1381 1785704 - 1787533 + | phosphogluconate dehydratase Sde_1382 1787579 - 1788208 + | 2-keto-3-deoxy-phosphogluconate aldolase TERM 2025 1788306 - 1788283 - f 90 -7.4 -5.1101 | gap 1, opp_overlap 1788283 CTAGCAGCTAAAAAA GCGCCT-AGGG TTA CCCTTAGGTGC TTTTTTTATGTGCGT TERM 2026 1788283 - 1788306 + F 100 -11 -5.72616 | opp_overlap 1788283 CTAGCAGCTAAAAAA GCGCCTAGGG TTAC CCTTAGGTGC TTTTTTTATGTGCGT TERM 2027 1788511 - 1788532 + G 72 -5.8 -4.49556 | GCCTGTTATCTGTTT CTGGTTGC GAGAAG GCGGCCAG TTTATTTGGTGCGAA Sde_1383 1788456 - 1788944 + | FeS assembly protein SufD TERM 2028 1788993 - 1788963 - T 72 -6.2 -4.34402 | gap 1, opp_overlap 1788963, overlap 1788966 GGGCTTATAGCAAAA GCATACGGCGC TGTCTTGTTT GCGCCGTA-GC TACTTGTGCTCCTGC TERM 2029 1789018 - 1789030 + T 71 -9.1 -3.24924 | overlap 1789016 TCCTGCTGTTTTGTT GGCGT TAT ACGCC TATTCTGCCTAAAAC Sde_1384 1789285 - 1789022 - | cysteine desulphurases, SufS Sde_1385 1789447 - 1789764 + | HesB/YadR/YfhF TERM 2030 1789771 - 1789803 + F 71 -7 -4.14792 | gap 1, opp_overlap 1789773, overlap 1789774 GCCGCGTAATGATTT AAGCGCGGCACTTGC CTAA GCAAG-GCTGCGTTC TTGTATTTTTGGTTT TERM 2031 1789774 - 1789800 + F 93 -10.9 -4.14576 | gap 1, opp_overlap 1789773, overlap 1789771 GCGTAATGATTTAAG CGCGGCACTTGC CTAA GCAAG-GCTGCG TTCTTGTATTTTTGG Sde_1386 1790611 - 1793751 + | hypothetical protein TERM 2032 1793927 - 1793959 + F 100 -14.3 -5.61824 | opp_overlap 1793926 1793925 ATCTTAAAGAGAATT GCGGTAACAATAGTT AAT GGCTGTTGTTACCGC TTTTTTTGCATTTTC TERM 2033 1793977 - 1793993 + F 72 -6.5 -4.33274 | overlap 1793978 TTTTTGCATTTTCTC TCGCCTA AAG TAGGCGC TTTTGCTGCTATCCA TERM 2034 1793978 - 1793992 + F 74 -10 -3.19482 | overlap 1793977 TTTTGCATTTTCTCT CGCCTA AAG TAGGCG CTTTTGCTGCTATCC Sde_1387 1794210 - 1795022 + | hypothetical protein Sde_1388 1795271 - 1795041 - | hypothetical protein Sde_1389 1796082 - 1795423 - | putative methyl-accepting chemotaxis sensory transducer Sde_1390 1796620 - 1796150 - | hypothetical protein TERM 2035 1797808 - 1797792 - g 100 -3.7 -5.88471 | opp_overlap 1797792 TAGTAGTAAAAAAAA TTTGTCC ATT GCACAAA TTTATACTGCTGCAG Sde_1391 1796779 - 1797918 + | AraC family transcriptional regulator Sde_1392 1799141 - 1797936 - | putative sensory transduction histidine kinase TERM 2036 1800456 - 1800434 - g 71 -9.9 -3.12595 | gap 1, opp_overlap 1800452, overlap 1800432 TGTAACCATCGAAGA TGT-GCCCGG AGAA CCGGGCAACA AAGCGGTTGTTTTTG TERM 2037 1802516 - 1802526 + G 77 -6.8 -4.41609 | overlap 1802500 GTTAAGCGGCAATGG CGCT TAC AGCG TTTCTATTTCTGGTC Sde_1393 1800168 - 1805291 + | thiol oxidoreductase-like TERM 2038 1805334 - 1805354 + T 100 -16.9 -5.75342 | GTGTTGTTACCCCTT GCGGCGCTA ATA TAGCGCCGC TTTTTTTTGAGCAGA TERM 2039 1805604 - 1805589 - T 100 -11.8 -5.14477 | TAGAGATTGAAAAAA GCCCGC TAAT GCGGGC GAGGGCAGAGGGGGA Sde_1394 1806973 - 1805639 - | Beta-glucosidase TERM 2040 1806745 - 1806728 - G 74 -5.5 -4.68724 | opp_overlap 1806728, overlap 1806730 CCACGCAATAGAAAA GCGGTAG GCAT CTACCCC TAGGTTGGCAATAAG TERM 2041 1807786 - 1807800 + G 75 -2.8 -5.14563 | overlap 1807777 1807776 GTTACTGCAGCAACG CTGC CTCTTGT GCAG TTTTTTGGTAAGGGC Sde_1395 1807300 - 1808631 + | hypothetical protein Sde_1396 1808683 - 1809681 + | LacI family transcription regulator TERM 2042 1809738 - 1809750 + F 77 -10.5 -3.22339 | opp_overlap 1809719 TGGTGTTTTTGTCGC GCGCC AAG GGCGC TTCATCGCATTTTAT TERM 2043 1809786 - 1809802 + F 76 -2.9 -5.34309 | CTCATATTGTTAAAT GGTTTGG CAC CTAATCC TTTTTGTTTGGTGCT TERM 2044 1809870 - 1809883 + F 87 -5.2 -5.42259 | overlap 1809869 1809882 TACATAAAACTTCCC GCGC CTTTGA GCGC TTTTTTTAGAGCTAG TERM 2045 1811382 - 1811398 + G 82 -10.9 -3.64487 | ATTGAAAGGCTCTTA CACCTTC GAT GAAGGTG TTGTTAAGAGTGTAG Sde_1397 1809961 - 1812921 + | nucleoside diphosphate kinase TERM 2046 1812949 - 1812968 + F 100 -12.2 -6.11644 | opp_overlap 1812949 GTAACTACCTTTAAA TGCCACTG GAAA CAGTGGCA TTTTTTTTTAACTAA TERM 2047 1812968 - 1812949 - f 93 -12.2 -3.59315 | opp_overlap 1812949 GTAACTACCTTTAAA TGCCACTG GAAA CAGTGGCA TTTTTTTTTAACTAA Sde_1398 1813097 - 1814659 + | hypothetical protein Sde_1399 1814677 - 1815393 + | hypothetical protein Sde_1400 1815491 - 1816444 + | Pass1-related protein Sde_1401 1816486 - 1817976 + | IspG protein TERM 2048 1818266 - 1818286 + G 83 -4 -5.28778 | TGGTGTAAGCAAATT GCAGTGTA AACCC TATGCTGC TTTTTTCTCGATGGT TERM 2049 1818382 - 1818419 + G 70 -2.2 -5.03715 | gap 2, overlap 1818376 CGTCTTTCGCAGTAA TGCTGTATTTGGCCGAAG GTGA TTTCGG--AGGTACAGCA TTTTTTAAGCATAAT Sde_1402 1818009 - 1818710 + | histidyl-tRNA synthetase, class IIA Sde_1403 1818812 - 1819612 + | hypothetical protein TERM 2050 1819634 - 1819672 + T 100 -12.3 -3.82531 | opp_overlap 1819634 1819655, overlap 1819627 1819636 1819638 CGTTAAACCCTACAA GCTGGCTGCGCCAGCGC TAAAT GCGCTGGGGCAGCTCAC TTTGCTAAATTATTT TERM 2051 1819672 - 1819634 - T 95 -12.3 -3.39668 | opp_overlap 1819634 1819627 1819636 1819638, overlap 1819655 CGTTAAACCCTACAA GCTGGCTGCGCCAGCGC TAAAT GCGCTGGGGCAGCTCAC TTTGCTAAATTATTT TERM 2052 1819636 - 1819671 + T 100 -15.5 -2.88434 | gap 1, opp_overlap 1819634 1819655, overlap 1819634 1819627 1819638 TTAAACCCTACAAGC TG-GCTGCGCCAGCGC TAAAT GCGCTGGGGCAGCTCA CTTTGCTAAATTATT TERM 2053 1819638 - 1819668 + T 100 -18.3 -2.68546 | opp_overlap 1819634 1819655, overlap 1819636 1819634 1819627 AAACCCTACAAGCTG GCTGCGCCAGCGC TAAAT GCGCTGGGGCAGC TCACTTTGCTAAATT Sde_1404 1820070 - 1819669 - | Pyrrolo-quinoline quinone TERM 2054 1820244 - 1820212 - H 100 -15.7 -3.85698 | opp_overlap 1820212 1820219, overlap 1820219 GGGTCTTTGCATAAA CAAAAAAGCCCCGCT ATT AGCGAGGCTTTGTTG TTTGGTACCAGAGGC TERM 2055 1820212 - 1820244 + H 100 -13.5 -3.72576 | opp_overlap 1820212 1820219, overlap 1820219 GGGTCTTTGCATAAA CAAAAAAGCCCCGCT ATT AGCGAGGCTTTGTTG TTTGGTACCAGAGGC TERM 2056 1820237 - 1820219 - H 100 -12.4 -5.72622 | opp_overlap 1820219 1820212, overlap 1820212 TGCATAAACAAAAAA GCCCCGCT ATT AGCGAGGC TTTGTTGTTTGGTAC TERM 2057 1820219 - 1820237 + H 100 -10.2 -4.60258 | opp_overlap 1820212 1820219, overlap 1820212 TGCATAAACAAAAAA GCCCCGCT ATT AGCGAGGC TTTGTTGTTTGGTAC TERM 2058 1820288 - 1820308 + H 86 -11.9 -2.90714 | overlap 1820290 GCACGCTTTTAAGGG CGGGGGATT TTG AATCCCCTG TGTCTACCAATTTCA TERM 2059 1820290 - 1820306 + H 79 -10.9 -3.00215 | overlap 1820288 ACGCTTTTAAGGGCG GGGGATT TTG AATCCCC TGTGTCTACCAATTT TERM 2060 1821098 - 1821122 + G 72 -9.3 -3.53012 | opp_overlap 1821098 1821100 GATGGTGTTTAACAA TACGCGCGT TATACCC GCGCGCGTA TTTGGCCAAAAGGCA TERM 2061 1821118 - 1821100 - g 70 -8.8 -3.38812 | opp_overlap 1821098, overlap 1821098 TGGTGTTTAACAATA CGCGCG TTATACC CGCGCG CGTATTTGGCCAAAA TERM 2062 1821448 - 1821432 - g 80 -5.7 -4.9792 | overlap 1821435 TATGGCACACAAAAA GGAGCGG TTG CTGCCCC CACCGCAGGTCTGCA TERM 2063 1821649 - 1821636 - g 72 -5.9 -4.4009 | opp_overlap 1821645 1821646, overlap 1821645 1821646 TGCGACCTTATAAAA GCCAC TAAA GCGGC TGGCAAGCGCGTTAT TERM 2064 1821882 - 1821902 + G 95 -7.5 -5.32944 | opp_overlap 1821869 AACGCCTATCAGCAG GCGGTGGCG CAG TGCTATCGC TTTTTTAGTTATGGC Sde_1405 1820919 - 1821971 + | small GTP-binding protein domain-containing protein tgt 1821968 - 1823092 + | queuine tRNA-ribosyltransferase TERM 2065 1823929 - 1823919 - g 87 -6.8 -5.26119 | TCGCGAAAAAGAAAA GCAC GCA GTGC AGCAAAACTTAACCA Sde_1407 1823239 - 1825107 + | secretion protein SecD Sde_1408 1825152 - 1826105 + | protein translocase subunit secF TERM 2066 1826519 - 1826508 - g 71 -7.2 -4.0342 | overlap 1826509 GCGAAGTAATAACAA GCCG CAAG CGGC AGCAGCGATCGTCAC TERM 2067 1827722 - 1827738 + G 75 -10.1 -3.54307 | GGCAATGCCAGCGTG CGTGCCG ACT CGGTACG TTTAAAGCAAGTATT Sde_1409 1826480 - 1828537 + | Signal transduction histidine kinase-like TERM 2068 1828627 - 1828604 - T 100 -12.5 -5.08088 | opp_overlap 1828604 AATGGCCAATAAAAA GGCTTGTCG TACTAG CGACAAGCC TTTTTAGTTTTTACT TERM 2069 1828604 - 1828627 + T 100 -13.2 -5.1971 | opp_overlap 1828604 AATGGCCAATAAAAA GGCTTGTCGT ACTA GCGACAAGCC TTTTTAGTTTTTACT Sde_1410 1829461 - 1828658 - | inositol-1(or 4)-monophosphatase TERM 2070 1828873 - 1828859 - G 72 -9.2 -3.58533 | overlap 1828850 CCAGAAGCCGTCAAA GCGGCC GGC GGCCAC ATAGGCCAAATCTAA TERM 2071 1829580 - 1829561 - H 75 -8.6 -3.885 | gap 1 ATTGGTATAGAACAA GCGATGAGC ACT GC-CATCGC AAAACAGGGCGCGCA Sde_1411 1829753 - 1830556 + | RNA methyltransferase TERM 2072 1830599 - 1830583 - f 73 -7.3 -4.21936 | opp_overlap 1830583 1830578 GCCATAAGGCTAAAA CCTACTA AAA CAGTAGG TTATATACTTGATTG Sde_1412 1830665 - 1831159 + | BadM/Rrf2 family transcriptional regulator Sde_1413 1831195 - 1832418 + | cysteine desulfurase TERM 2073 1832407 - 1832395 - f 70 -7.7 -3.6608 | ACCAGCCTACGTAAA TCACC ACC GGTGA GATACGCCTAAATAG TERM 2074 1832619 - 1832598 - g 70 -2.3 -5.07486 | gap 1, opp_overlap 1832604, overlap 1832601 1832602 1832604 TATCTCCAACAAAAA GAACGAGCCA GAG TGGCT-GTTG GAGTGGCGATTAAAA TERM 2075 1833289 - 1833279 - g 77 -6.8 -4.4009 | TTCCACGGTACAAAA CTGG TAC CCAG GTGATGCCGAAGGCA Sde_1414 1832470 - 1833909 + | cysteine desulfurase activator complex subunit SufB TERM 2076 1834141 - 1834124 - g 71 -7.1 -4.18197 | opp_overlap 1834124 ACGGTGCAGGTAAAA GTACATT AGGC AATGTAC TGTCTGGCCGTGAAG TERM 2077 1834383 - 1834372 - g 71 -7.2 -4.17048 | TCTTTCTTAAAAGAA GCGC GTGC GCGC TGTCAAGAAGTTGAC Sde_1415 1834003 - 1834752 + | Iron-regulated ABC transporter ATPase subunit SufC TERM 2078 1834851 - 1834827 - g 72 -9.3 -3.4791 | opp_overlap 1834826 1834827, overlap 1834833 GATAAAACACAGCAA GGTAAACAAGC TTG GCTTGGTCACC GTTTTCCTACCCGTA Sde_1416 1834752 - 1836071 + | Iron-regulated ABC transporter permease protein SufD TERM 2079 1836750 - 1836762 + G 76 -4.8 -4.82901 | TACAGGCGCTAGACT GCGA CTTTT TCGC TTTTTCTGGCCACAA TERM 2080 1837168 - 1837200 + G 79 -9.7 -3.73072 | overlap 1837165 CGATCAGCAGGGGGT GGCTGTGCGCACAGG TCA CCATTGTGCTCAGCC TTTAATGGCACGCTT Sde_1417 1836068 - 1837321 + | cysteine desulfurase TERM 2081 1837480 - 1837458 - g 76 -9.1 -3.71527 | opp_overlap 1837458 1837457 TGCTAAGCAGCTAAA GCAGAGCGG TAAGG CCGCTGTGC GTTTAAGTTTAAAAG Sde_1418 1837378 - 1837728 + | ATPase TERM 2082 1838226 - 1838198 - g 73 -2.4 -5.12707 | gap 1, overlap 1838200 CCAAATGTTAAAAAA GTTGAGGTGGAAC TTGT GTTCGACC-CACC ATGGCACCGCGATAT Sde_1419 1837748 - 1838284 + | metal-sulfur cluster enzyme Sde_1420 1838302 - 1838736 + | cysteine desulfuration protein SufE TERM 2083 1838752 - 1838770 + T 100 -13.2 -5.43866 | opp_overlap 1838752 CAGCAGAAATAAAAA TGGCCCTT TGA AAGGGCCA TTTTTTTAGCGGTTA TERM 2084 1838770 - 1838752 - T 100 -13.2 -5.40464 | opp_overlap 1838752 CAGCAGAAATAAAAA TGGCCCTT TGA AAGGGCCA TTTTTTTAGCGGTTA Sde_1421 1840531 - 1838804 - | hypothetical protein Sde_1422 1841854 - 1840553 - | ThiS, thiamine-biosynthesis TERM 2085 1842066 - 1842050 - R 81 -11.5 -2.90075 | opp_overlap 1842049 1842048, overlap 1842052 GCGCTTTGAAGCATA GAGGCGC AAT GCGCCCC AGTTTATTGATAAAC TERM 2086 1842064 - 1842052 - R 76 -10.5 -3.00298 | opp_overlap 1842049 1842048, overlap 1842050 GCTTTGAAGCATAGA GGCGC AAT GCGCC CCAGTTTATTGATAA TERM 2087 1842175 - 1842200 + r 100 -11.3 -4.93696 | opp_overlap 1842174 1842173 TATGTCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTTCAC Sde_1423 1842639 - 1842292 - | hypothetical protein Sde_1424 1843942 - 1842827 - | potassium efflux system protein TERM 2088 1843218 - 1843177 - G 75 -2.9 -5.24129 | gap 1, opp_overlap 1843183, overlap 1843179 CCGCGCCAGAAAAAA TAGCAAGGC-AGCGGTGGAG TAA CTTCACCTCTAGGCTTGCCT GAAAGCGAATATTTT TERM 2089 1843216 - 1843179 - G 76 -7.7 -4.25873 | gap 1, opp_overlap 1843183, overlap 1843177 GCGCCAGAAAAAATA GCAAGGC-AGCGGTGGAG TAA CTTCACCTCTAGGCTTGC CTGAAAGCGAATATT Sde_1425 1844441 - 1843977 - | exonuclease VII, large subunit Sde_1426 1845562 - 1844783 - | IMP dehydrogenase TERM 2090 1845608 - 1845581 - R 77 -8.4 -4.05788 | opp_overlap 1845580 CGCTCCTAAAGTAAA TTGGGCCTCGGA AAAT TCTGAGGCCAAA GTATCGTTAGGCAGT Sde_1427 1846298 - 1845726 - | GMP synthase-like Sde_1428 1848430 - 1846295 - | hypothetical protein TERM 2091 1847217 - 1847229 + g 81 -3.4 -5.42259 | ATTTCGGTTGCGATT TTGC TGATT GCAA TTTTTTTAACCGTGG Sde_1429 1848964 - 1848503 - | hypothetical protein Sde_1430 1849121 - 1849546 + | nucleoside diphosphate kinase Sde_1431 1849583 - 1850779 + | Crp/FNR family transcriptional regulator TERM 2092 1851111 - 1851099 - g 75 -6.3 -4.53705 | AAGCTGCAGAGAAAA GCTTT CAA AAAGC GCTAAAAGGCCGGGC Sde_1432 1850822 - 1851601 + | hypothetical protein TERM 2093 1852520 - 1852493 - g 72 -2.7 -4.98531 | gap 1, overlap 1852494 GGTGGAAATTAAAAA CGCGAGCGGAAA AATTA TTTTCGC-CGCA GTGCAAACGCCAGCA Sde_1433 1851684 - 1852679 + | hypothetical protein ispG 1852727 - 1853839 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Sde_1435 1853884 - 1855155 + | histidyl-tRNA synthetase Sde_1436 1855165 - 1855881 + | hypothetical protein Sde_1437 1855881 - 1857035 + | PQQ repeat-containing protein TERM 2094 1857042 - 1857073 + F 73 -7.3 -4.09459 | gap 1, opp_overlap 1857048 1857049, overlap 1857043 1857049 GCTAAATAGTCATCT AGCAA-AGGGCCGC TTTCT GCGGCCTTATTGCG TTTATACCTTTTTGA TERM 2095 1857043 - 1857072 + F 79 -10.8 -3.04591 | gap 1, opp_overlap 1857048 1857049, overlap 1857042 1857049 CTAAATAGTCATCTA GCAA-AGGGCCGC TTTCT GCGGCCTTATTGC GTTTATACCTTTTTG TERM 2096 1857066 - 1857048 - f 70 -7.3 -3.767 | opp_overlap 1857043 1857042 1857049, overlap 1857049 TAGTCATCTAGCAAA GGGCCGC TTTCT GCGGCCT TATTGCGTTTATACC TERM 2097 1857049 - 1857065 + F 88 -10.8 -3.80019 | opp_overlap 1857048 1857049, overlap 1857043 1857042 AGTCATCTAGCAAAG GGCCGC TTTCT GCGGCC TTATTGCGTTTATAC TERM 2098 1857065 - 1857049 - f 77 -10.8 -2.85699 | opp_overlap 1857049 1857043 1857042, overlap 1857048 AGTCATCTAGCAAAG GGCCGC TTTCT GCGGCC TTATTGCGTTTATAC TERM 2099 1857863 - 1857853 - g 80 -6.8 -4.62069 | overlap 1857862 TCTCCATTGTAAAAA CGCT ACA AGCG ATTGACGACGCCAAC Sde_1438 1857099 - 1858514 + | putative GTP-binding protein EngA TERM 2100 1858566 - 1858542 - T 100 -12.2 -4.18197 | opp_overlap 1858542 AGTTGTTACTTAAAA GCCAGTGAAC TTAGT GTCCACTGGC TTTTTTATTGACGCA TERM 2101 1858542 - 1858566 + T 100 -10 -5.4505 | opp_overlap 1858542 AGTTGTTACTTAAAA GCCAGTGAAC TTAGT GTCCACTGGC TTTTTTATTGACGCA Sde_1439 1859599 - 1858619 - | flavodoxin, long chain Sde_1440 1860509 - 1859613 - | hypothetical protein TERM 2102 1862319 - 1862301 - g 73 -7.4 -4.13711 | GCAAAATATTACAAA GCGCTATA TTG TAGAGCGC AGAGATATTGCACTT Sde_1441 1860778 - 1863303 + | Outer membrane receptor proteins mostly Fe transport-like TERM 2103 1863466 - 1863450 - g 70 -2.3 -5.00884 | ATTGCGCGCAAAAAA TATAGAT ACG ATCGATA ACCCAAAGGCGTACT Sde_1442 1863304 - 1863810 + | sigma-24 (FecI-like) Sde_1443 1863807 - 1864769 + | putative transcriptional regulator, putative TERM 2104 1864807 - 1864823 + F 81 -9.4 -3.90328 | opp_overlap 1864807 TTATATTCTATAAAA GAGGCC GGTTA GGCCTC TTTATCACCGTTCTA TERM 2105 1864823 - 1864807 - f 95 -9.4 -4.41548 | opp_overlap 1864807 TTATATTCTATAAAA GAGGCC GGTTA GGCCTC TTTATCACCGTTCTA TERM 2106 1866579 - 1866593 + G 78 -5.6 -4.81551 | opp_overlap 1866572 AACAAGAAGTGGCCA CGTGGG CTA CGCACG TTTTTGATGTAAATC Sde_1444 1865168 - 1868722 + | extracellular solute-binding protein TERM 2107 1868798 - 1868777 - f 73 -10.1 -2.92026 | opp_overlap 1868778 GAGCCTAATATCATA TCGCTAGCC CTCG GGCTAGCGT TTTTTTGCTTATCTA TERM 2108 1868778 - 1868797 + F 100 -13.6 -5.69379 | opp_overlap 1868777 AGCCTAATATCATAT CGCTAGCC CTCG GGCTAGCG TTTTTTTGCTTATCT TERM 2109 1868853 - 1868834 - f 72 -6.4 -4.2828 | overlap 1868838 GGTTATCTATTAAAA GCTAGTCG CTAT CGATTAGC TACAGCGTCCTATTT TERM 2110 1869164 - 1869180 + G 73 -10.9 -2.74488 | overlap 1869156 1869153 TTTGGTGCCGTACTC GCTAGCA CAA TGCTAGC TGGTTGCGGTGGTTC TERM 2111 1870337 - 1870354 + G 86 -11.3 -3.7732 | GCAAACAGTGATATT GCCATCC GTGT GGATGGC TTATTGGTGTACACC Sde_1445 1869092 - 1870513 + | phosphoribosylformylglycinamidine synthase TERM 2112 1870606 - 1870624 + F 100 -10.2 -5.28826 | AACTCTCCTCTCTAG GGCTGCCG TAC TGGCGGCC TTTTTTATGCCCTTT Sde_1446 1870866 - 1871984 + | hypothetical protein TERM 2113 1872004 - 1872022 + F 100 -13.1 -3.79678 | CTTGCTGATTGCCCA CCGGCGC TCAGT GCGCCGG TTGTTATCCCCCCTT Sde_1447 1872110 - 1873156 + | nucleoid-associated protein-like Sde_1448 1874134 - 1873205 - | hypothetical protein Sde_1449 1874702 - 1874340 - | hypothetical protein TERM 2114 1875273 - 1875261 - g 77 -6.9 -4.41114 | opp_overlap 1875267 1875270, overlap 1875257 GCACTACACAATAAA CGCGG AGC CCACG CTTAAAGGTGTGCTT TERM 2115 1875363 - 1875378 + G 76 -9 -3.68222 | TGTGGGTGGTGGGGC CACTGG CGTG CCAGTG TTGTTAGGGTTGGGG Sde_1450 1874830 - 1875690 + | hypothetical protein Sde_1451 1876509 - 1875706 - | ABC transporter, ATP-binding protein Sde_1452 1876919 - 1876506 - | transaldolase AB Sde_1453 1877216 - 1876923 - | dihydrouridine synthase TIM-barrel protein yjbN TERM 2116 1876958 - 1876969 + g 73 -4.4 -4.79451 | CAAGTGCGGCCAGTA GCAT AATG ATGC TTTTGTCTTTCAGCT TERM 2117 1877084 - 1877115 + g 70 -9.3 -3.46399 | overlap 1877083 1877081 AAATACGTGTGGTTG CGCGCGCTATCGC TTTTTC GCGAATGCGCGTG TCTATTTTGCGTTTA thiG 1878052 - 1877243 - | thiazole synthase Sde_1455 1878282 - 1878055 - | hypothetical protein Sde_1456 1879459 - 1878275 - | ATP-dependent DNA helicase RecQ TERM 2118 1879423 - 1879438 + g 73 -7.5 -4.03413 | CAATGGCTGCGTGCA CGGGC GATTCG GCCCG TTTATGTAAGGAGGT Sde_1457 1881318 - 1879567 - | K+ efflux antiporter, putative (KEA1) TERM 2119 1880483 - 1880464 - G 75 -2.8 -5.252 | opp_overlap 1880466, overlap 1880466 CACGCCCATAAAAAA CAGGCCTA AAAA TAAGCCTT TAAACGGGGCGATTT TERM 2120 1880746 - 1880736 - G 76 -8.2 -4.07568 | overlap 1880737 TGGCTGCCTTTAAAA GGGC GCT GCCC ACCGTTAGCCATAGG Sde_1458 1882745 - 1881381 - | exodeoxyribonuclease VII large subunit TERM 2121 1882472 - 1882493 + g 72 -6.5 -4.2231 | overlap 1882452 CGCGCAGCAGCACTT TATCGCCCG CTTT TGGGCGAAA TTTTACCTGCTGGTT Sde_1459 1882780 - 1884450 + | inosine-5'-monophosphate dehydrogenase TERM 2122 1884476 - 1884458 - f 91 -7.3 -5.27335 | opp_overlap 1884459, overlap 1884459 GCCGTTAAATAAAAA GCCGGGC TATAT GCCCGGT TTTTGCTTTCCCCCT TERM 2123 1884459 - 1884475 + F 100 -10.8 -4.98531 | opp_overlap 1884459 1884458 CCGTTAAATAAAAAG CCGGGC TATAT GCCCGG TTTTTGCTTTCCCCC TERM 2124 1884475 - 1884459 - f 88 -10.8 -3.75678 | opp_overlap 1884459, overlap 1884458 CCGTTAAATAAAAAG CCGGGC TATAT GCCCGG TTTTTGCTTTCCCCC guaA 1884468 - 1886096 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2125 1886431 - 1886473 + T 100 -15.2 -3.14132 | gap 1, opp_overlap 1886445, overlap 1886433 1886445 CTTTTGCCGTTTCGT TACCCATAAAAAAACCGCC ATCTAG GGCGG-TTTTTTATGGGTG TTAATAAAGCAGCAG TERM 2126 1886433 - 1886471 + T 100 -15.6 -3.13403 | gap 1, opp_overlap 1886445, overlap 1886431 1886445 TTTGCCGTTTCGTTA CCCATAAAAAAACCGCC ATCTAG GGCGG-TTTTTTATGGG TGTTAATAAAGCAGC TERM 2127 1886460 - 1886445 - T 100 -7.5 -5.64274 | opp_overlap 1886433 1886431 1886445 TTACCCATAAAAAAA CCGCC ATCTAG GGCGG TTTTTTATGGGTGTT TERM 2128 1886445 - 1886460 + T 91 -7.5 -5.30686 | opp_overlap 1886445, overlap 1886433 1886431 TTACCCATAAAAAAA CCGCC ATCTAG GGCGG TTTTTTATGGGTGTT Sde_1461 1887064 - 1886531 - | hypothetical protein TERM 2129 1887163 - 1887145 - R 73 -6 -4.45544 | opp_overlap 1887145 CGTCACCAACTAAAA TGTCAAGT AAA ACGTGACA TAGTTCCTTGTGTCT Sde_1462 1887627 - 1887265 - | hypothetical protein Sde_1463 1888218 - 1887634 - | glutamyl-tRNA synthetase Sde_1464 1888996 - 1888262 - | transcriptional activator Anr TERM 2130 1888458 - 1888436 - G 80 -6.2 -4.87803 | opp_overlap 1888435 1888452 1888452, overlap 1888437 1888452 CATGGGTAAATAAAA CTCGGTGCTT GAT AAGCCCCGAT GGTGGTTTCTTGTAG TERM 2131 1888457 - 1888437 - G 75 -9.7 -3.51958 | opp_overlap 1888435 1888452 1888452, overlap 1888436 1888452 ATGGGTAAATAAAAC TCGGTGCTT GAT AAGCCCCGA TGGTGGTTTCTTGTA TERM 2132 1888756 - 1888773 + g 72 -4.9 -4.72272 | gap 1, overlap 1888756 TTTGCTCCTCGCCAT CC-CTACT GAT AGTAGAGG TTTTTACTGCGCCAG Sde_1465 1889873 - 1889085 - | hypothetical protein Sde_1466 1890946 - 1890239 - | NAD-dependent deacetylase TERM 2133 1890829 - 1890839 + g 71 -6.8 -4.07568 | GGGTGGCTACATCTT CCAC TCT GTGG TTTTCCCACAGGCCG Sde_1467 1891568 - 1890933 - | hypothetical protein TERM 2134 1891502 - 1891490 - G 74 -5.5 -4.63107 | opp_overlap 1891500 AGCAAACAACTAAAA GCATG CAG CACGC GATGGTGAACCAAGG Sde_1468 1892443 - 1891598 - | transglycolase; epimerase TERM 2135 1892200 - 1892212 + g 72 -10.5 -2.92618 | opp_overlap 1892200, overlap 1892199 1892197 TCATTGTGCGTACAA GGCCG TGG CGGCC CTTGTTCTCTACAGG TERM 2136 1892212 - 1892200 - G 74 -10.5 -3.29144 | opp_overlap 1892200 1892199 1892197 TCATTGTGCGTACAA GGCCG TGG CGGCC CTTGTTCTCTACAGG TERM 2137 1892269 - 1892289 + g 71 -10.4 -2.65116 | overlap 1892268 1892267 TGCCACCGCGAATCG CGGCGCTG CCATC CAGTGCCG ATGTTTCGCTCATCC Sde_1469 1893397 - 1892543 - | glutamine cyclotransferase-like TERM 2138 1893467 - 1893524 + r 79 -8.6 -4.21439 | opp_overlap 1893476, overlap 1893476 GTGGTGTGCAGGCGT ATTGGCA-AAGGCCTATTGGCTAAGACC TGTA GG-CAAAGCCAATAGGCCTTGTGCGAAA TTTCTATTCACCTTC TERM 2139 1893476 - 1893514 + r 95 -12.5 -3.32562 | gap 1, opp_overlap 1893476, overlap 1893467 AGGCGTATTGGCAAA GGCCTATTGGCTAAGACC TGTA GG-CAAAGCCAATAGGCC TTGTGCGAAATTTCT TERM 2140 1893514 - 1893476 - R 100 -12.5 -3.57263 | gap 1, opp_overlap 1893476 1893467 AGGCGTATTGGCAAA GGCCTATTGGCTAAGACC TGTA GG-CAAAGCCAATAGGCC TTGTGCGAAATTTCT Sde_1470 1893950 - 1893528 - | peptidase, metallopeptidases TERM 2141 1893573 - 1893605 + g 72 -5.7 -4.41241 | TTCCCGTTCCTCTAC GTAGCTCACCGC-GT CGTTT ACAGCG-TGGGCTAC TTTTATAAGCATTTC Sde_1471 1896073 - 1893950 - | hypothetical protein TERM 2142 1894424 - 1894388 - G 71 -8 -3.88396 | gap 2, opp_overlap 1894400, overlap 1894389 GTGCAAATTAAAAGA GGCGCCAGCGC--AGTGG ATG CCACTTTGCGCTGGGGCA ATATAACCTGCACCA TERM 2143 1894423 - 1894389 - G 74 -11.5 -2.92314 | gap 2, opp_overlap 1894400, overlap 1894388 TGCAAATTAAAAGAG GCGCCAGCGC--AGTGG ATG CCACTTTGCGCTGGGGC AATATAACCTGCACC TERM 2144 1896050 - 1896061 + g 73 -2.2 -5.2189 | TGTGTGTGCAATATA TTCG TGCT CGAG TTTTTTAGTCATTGA Sde_1472 1896610 - 1896080 - | flavodoxin FldB Sde_1473 1897072 - 1896623 - | YbhB and YbcL Sde_1474 1897185 - 1897466 + | PKD Sde_1475 1897463 - 1898347 + | TonB-dependent receptor Sde_1476 1898340 - 1898870 + | tRNA-adenosine deaminase TERM 2145 1898922 - 1898882 - T 93 -14.3 -2.53015 | opp_overlap 1898884 1898894, overlap 1898894 ATAGTGCTTAATTTA GTCAATAAAAAAGCGCTTA ATT TAAGCGCTTTTTTATTGTT TGGTAGGTGTACATT TERM 2146 1898884 - 1898920 + T 100 -21.3 -3.78022 | opp_overlap 1898882 1898894, overlap 1898894 AGTGCTTAATTTAGT CAATAAAAAAGCGCTTA ATT TAAGCGCTTTTTTATTG TTTGGTAGGTGTACA TERM 2147 1898894 - 1898910 + T 100 -10.9 -5.72254 | opp_overlap 1898882 1898894, overlap 1898884 TTAGTCAATAAAAAA GCGCTTA ATT TAAGCGC TTTTTTATTGTTTGG TERM 2148 1898910 - 1898894 - T 100 -10.9 -5.4833 | opp_overlap 1898894 1898884, overlap 1898882 TTAGTCAATAAAAAA GCGCTTA ATT TAAGCGC TTTTTTATTGTTTGG Sde_1477 1900442 - 1898937 - | extracellular solute-binding protein TERM 2149 1899779 - 1899769 - G 77 -6.8 -4.53036 | opp_overlap 1899769, overlap 1899764 TCAGAAATATCAAAA GCCA CGG TGGC TTTGGGGTAAACAGG Sde_1478 1900885 - 1904757 + | phosphoribosylformylglycinamidine synthase TERM 2150 1904790 - 1904813 + F 100 -12.4 -4.80167 | opp_overlap 1904790 AGGTTTTGCGTATAA CGGCTGGCAC TTAG GTGTCGGCCG TTTTCATTTTTAATA Sde_1479 1904884 - 1905864 + | putative oxidoreducatse TERM 2151 1905890 - 1905917 + F 78 -9.9 -3.4071 | GCGTTAGTATTCCAA GCGAATAGGGC GTGGTG GCGCTATTCGC TTATAAGTAATTATT Sde_1480 1906081 - 1907556 + | glycerol kinase TERM 2152 1908164 - 1908140 - g 70 -2.1 -5.07486 | overlap 1908144 1908155 TATTTGCAATAAAAA TAAATTACCCA AAA CGGGTAAGTTG CCCACCAATACTTGG TERM 2153 1908160 - 1908144 - g 85 -7.3 -5.05606 | overlap 1908140 1908155 TGCAATAAAAATAAA TTACCCA AAA CGGGTAA GTTGCCCACCAATAC Sde_1481 1907559 - 1908299 + | glycerophosphoryl diester phosphodiesterase TERM 2154 1909187 - 1909170 - g 72 -6.3 -4.35524 | CGTGGAAAGGTAAAA CTATGGT GGGT ACCACAG AAACGCACTTTACCG Sde_1482 1908341 - 1909537 + | Fis family transcriptional regulator Sde_1483 1910535 - 1909561 - | Fis family transcriptional regulator TERM 2155 1909626 - 1909642 + g 85 -5.7 -5.29445 | overlap 1909617 GGTCTAGCCCTGCTA GCACGCT AGC GGCGAGC TTTTTATTATTAGCG TERM 2156 1910328 - 1910338 + g 79 -3.2 -5.40474 | overlap 1910337 GCGGTACGGCTTTTT GTCT GGT AGGC TTTTTTTGCAAAGCT TERM 2157 1910434 - 1910446 + g 78 -5.5 -4.79223 | opp_overlap 1910434 TAAATAGCGGTAATA CGCTT CTT GAGCG TTTTTGATGCTGTAA Sde_1484 1911108 - 1910635 - | hypothetical protein Sde_1485 1912108 - 1911176 - | transaldolase B TERM 2158 1912234 - 1912208 - R 78 -8.8 -3.80745 | AACACAATAGCTAAA GCCTTATTGTAA CAT CTACCATAAGGC GCAACTATGACTGTT Sde_1486 1913333 - 1912338 - | tRNA-dihydrouridine synthase A TERM 2159 1914052 - 1914038 - g 70 -10 -3.0464 | AACCTACGGTGAAGA CCCGTT CTT AACGGG GCGTATGGCCATTAA TERM 2160 1914857 - 1914873 + G 72 -8.7 -3.79419 | overlap 1914855 1914858 GGGGATTGTTAATCG TGTTGGC GAG GCCAACG TATTTTATGCCCCAG Sde_1487 1913511 - 1916192 + | Beta-glucosidase TERM 2161 1916217 - 1916235 + F 100 -9.5 -5.89827 | TGATATCTTGCTTAG GCCCGCT TTTAT GGCGGGC TTTTTTTTGCTCATT TERM 2162 1917002 - 1917020 + G 75 -9.6 -3.53012 | TGGCTGCGGTGTAAT TGTTGCCA AAG TGGCAGCA TTTGCAGAACCAAAC Sde_1488 1916529 - 1917761 + | hypothetical protein TERM 2163 1917748 - 1917770 + T 76 -10.5 -2.91144 | opp_overlap 1917759, overlap 1917745 GCAGTATACCGCTAC TGCGCAGGC AATAA GCCTGCGCC TAATTTAAAAACTAG Sde_1489 1919593 - 1917782 - | ATP-dependent DNA helicase RecQ Sde_1490 1919695 - 1919892 + | hypothetical protein TERM 2164 1920466 - 1920480 + G 72 -2.8 -5.03715 | overlap 1920467 CATGCCATTGCGGCG TTAGTG CAT CACTAC TTTTTTAAAGATAAT Sde_1491 1919941 - 1920519 + | cytochrome b561 TERM 2165 1920595 - 1920610 + F 70 -7.6 -3.57783 | opp_overlap 1920595 TATATGTACTTAAAA CAACGT CTTG ACGTTG TTCTCATTGTGCTGG TERM 2166 1920610 - 1920595 - f 76 -7.6 -4.20531 | opp_overlap 1920595 TATATGTACTTAAAA CAACGT CTTG ACGTTG TTCTCATTGTGCTGG Sde_1492 1920656 - 1921123 + | hypothetical protein TERM 2167 1921147 - 1921176 + T 70 -7.1 -3.86283 | overlap 1921148 TTTAAAAATCGTTCC CTCCCACTGTTCG TAAG TGAGCGGTGGGAC TTTCCTCTCAATTAA TERM 2168 1921148 - 1921175 + T 76 -10.6 -2.91288 | overlap 1921147 TTAAAAATCGTTCCC TCCCACTGTTCG TAAG TGAGCGGTGGGA CTTTCCTCTCAATTA TERM 2169 1921478 - 1921433 - T 73 -5.5 -4.64844 | opp_overlap 1921444, overlap 1921444 TTTATAGAGAGAAAA TATTATAGAAATACCCCGCTA GTAC TAGCGGGGTATTTTTTTAGCT TAATAACTATATTTC TERM 2170 1921444 - 1921467 + T 100 -15.4 -5.54192 | opp_overlap 1921433 1921444 AAAATATTATAGAAA TACCCCGCTA GTAC TAGCGGGGTA TTTTTTTAGCTTAAT TERM 2171 1921467 - 1921444 - T 100 -15.4 -4.16101 | opp_overlap 1921444, overlap 1921433 AAAATATTATAGAAA TACCCCGCTA GTAC TAGCGGGGTA TTTTTTTAGCTTAAT Sde_1493 1924267 - 1921478 - | outer membrane protein TERM 2172 1924339 - 1924322 - R 100 -14.1 -4.24075 | opp_overlap 1924322 AGCCAGTAATAGAAA GGGCGCC GTAG GGCGCCC TTTATTTACGGCTGT TERM 2173 1924322 - 1924339 + r 100 -14.1 -4.43208 | opp_overlap 1924322 AGCCAGTAATAGAAA GGGCGCC GTAG GGCGCCC TTTATTTACGGCTGT Sde_1494 1926086 - 1924392 - | serine/threonine protein kinase TERM 2174 1926412 - 1926423 + r 79 -3 -5.36441 | opp_overlap 1926412 1926404 TCGAATACAAAAAAT TACA AACA TGTA TTTTTTGTGTCAGAA TERM 2175 1926646 - 1926625 - R 100 -10.2 -4.55721 | opp_overlap 1926628 AAACCTTACATAAAA GAAGCGTG AACAAA CACGCTTC TGTCACCTGTTACTC Sde_1495 1927219 - 1926656 - | hypothetical protein TERM 2176 1927002 - 1927017 + g 72 -4.8 -4.7254 | TCACTGGCGTCTGTG TTTTTG CTAG CAAAAA TTTTTGCTAGCGCGT gltX 1927352 - 1928863 + | glutamyl-tRNA synthetase TERM 2177 1928876 - 1928901 + T 71 -8.3 -3.49475 | gap 1, opp_overlap 1928863 1928878 TAGTTGACAGCCCAA GAGGCACTGCAT ACA ATGC-GCGCCTC TTGTGTGGCAATGCC TERM 2178 1929017 - 1929036 + T 100 -11.4 -5.58454 | opp_overlap 1929017 CCACCAAATAAAAAA CCTCGCTC GCAA GAGCGGGG TTTTTTTAATGTGGG TERM 2179 1929036 - 1929017 - T 100 -9.2 -5.68438 | opp_overlap 1929017 CCACCAAATAAAAAA CCTCGCTC GCAA GAGCGGGG TTTTTTTAATGTGGG TERM 2180 1929179 - 1929189 + T 73 -8.2 -3.57406 | overlap 1929178 CCATGTCTAAAAGGT GCCG ATT CGGC TATTTATACTGCCAA TERM 2181 1929400 - 1929420 + T 77 -11.1 -2.89881 | ATTTTCTGAATCTTT ATGGTGGGC ATT GCCCACCAG TATATAGAGTGCCTG Sde_1497 1930267 - 1929563 - | hypothetical protein Sde_1498 1930984 - 1932006 + | hypothetical protein Sde_1499 1932230 - 1933051 + | hypothetical protein TERM 2182 1933462 - 1933477 + G 74 -3.3 -5.05153 | ATCTCCGATTCTGAG GCATA TAGAAT TATGC TTTCTTTTTTGGAGT Sde_1500 1933048 - 1934016 + | hypothetical protein Sde_1501 1934122 - 1934772 + | hypothetical protein TERM 2183 1934859 - 1934896 + T 77 -10.6 -3.07501 | TCCACGTAGGTTTGG AGTGTTGGCCCTATAG AAATAC CTCTAGGGCCAGCACG TGTTAAAAGTTGTAT Sde_1502 1935672 - 1934899 - | hypothetical protein TERM 2184 1935743 - 1935765 + H 71 -9.8 -2.72799 | overlap 1935747 GGAGAGGCGTTGATT GTTGCCTGCC ATT GGCAGGTGGC TGGTATGTGTCGCCC TERM 2185 1937030 - 1937044 + G 74 -8.6 -3.96148 | opp_overlap 1937030 1937027 1937018 ACACTTGGAATAGTA TTACCG AAG CGGTAA TTTATACTCCAAGCG TERM 2186 1937292 - 1937305 + G 72 -8.1 -3.67775 | CGAGTATCGTGTTAC TGCCG TAAG CGGCA TTATTCGCTCAAACT Sde_1503 1936009 - 1938033 + | ATPase TERM 2187 1938079 - 1938100 + T 86 -5.7 -5.38249 | opp_overlap 1938079 TAAGTTACGCAGAAA GGGCGGCCT TACA GGGGCGCTC TTTTTTGTGATTACT Sde_1504 1939063 - 1938119 - | hypothetical protein TERM 2188 1938415 - 1938431 + g 73 -8 -4.02108 | CCAAGCTTTGCTCTA TGGCGA GCGTA TCGCCA TTTAATTCTCGTAAC TERM 2189 1939068 - 1939092 + H 73 -2.9 -5.19251 | overlap 1939075 CTATTCAGCAAGTGT TTATATTCCTA CGT TAGGTATTTAA TTTTTCTTGGTGTTG Sde_1505 1939262 - 1940074 + | AraC family transcriptional regulator Sde_1506 1940162 - 1940734 + | PBP family phospholipid-binding protein Sde_1507 1941337 - 1943958 + | hypothetical protein TERM 2190 1943963 - 1943990 + F 78 -5.4 -4.93898 | opp_overlap 1943942, overlap 1943964 1943966 ACACCGAGTAATGCT TTAGGGGCGCTC TTCG GGGCGCTCCTCC TTTTTGTCCTGCTAT TERM 2191 1943964 - 1943989 + F 73 -8.9 -3.55254 | opp_overlap 1943942, overlap 1943963 1943966 CACCGAGTAATGCTT TAGGGGCGCTC TTCG GGGCGCTCCTC CTTTTTGTCCTGCTA TERM 2192 1943966 - 1943987 + F 86 -11.5 -3.34102 | overlap 1943964 1943963 CCGAGTAATGCTTTA GGGGCGCTC TTCG GGGCGCTCC TCCTTTTTGTCCTGC TERM 2193 1944060 - 1944076 + F 84 -5.1 -5.30616 | opp_overlap 1944057 1944060 CTAGGCGTTAAATTA CCGTGTT GGT AAAACGG TTTTTCTTTGCATGC TERM 2194 1944673 - 1944683 + F 84 -5.4 -5.37043 | TAATCCCGTAATTTT CACA GGG TGTG TTTTTTGTGTGAAAT Sde_1508 1944846 - 1947722 + | TonB-dependent receptor TERM 2195 1947826 - 1947869 + F 100 -21.2 -5.73978 | opp_overlap 1947814 1947826 AAAGCTTAGCTAAAA GCCTGCTTGAGGCATGTAGT TTGT ACTGCATGCGTCAAGCGGGC TTTTTTATTTGTGGT TERM 2196 1947869 - 1947826 - f 100 -16.8 -4.20106 | opp_overlap 1947826, overlap 1947814 AAAGCTTAGCTAAAA GCCTGCTTGAGGCATGTAGT TTGT ACTGCATGCGTCAAGCGGGC TTTTTTATTTGTGGT TERM 2197 1948986 - 1949009 + G 85 -14 -3.01712 | CTATGACTTACCCGA CGATGCACAT GATT ATGTGCATCG TATTGGCCGCACAGG Sde_1509 1948021 - 1949217 + | DNA topoisomerase III TERM 2198 1949228 - 1949202 - T 77 -3.7 -5.15117 | opp_overlap 1949202 GAAAAGTGCAAAAAA GCCACAGAG AAGGTAACG CTTTGTGGC TTGATTTAATTATAA Sde_1510 1949835 - 1949260 - | hypothetical protein Sde_1511 1949917 - 1952301 + | DNA polymerase II Sde_1512 1952992 - 1952372 - | hypothetical protein TERM 2199 1952412 - 1952400 - G 75 -2.6 -5.1861 | CTCATCATTAAAAAA CCGC AAAAA GCAG GGTTGTTTGGGCTAA Sde_1513 1953422 - 1953057 - | hypothetical protein TERM 2200 1953391 - 1953376 - G 89 -9 -4.65895 | opp_overlap 1953383 TGCCCCATCGAAAAA GTAGCC ACGG GGCTAC CGCCTAGGTCTTTGT Sde_1514 1953613 - 1954308 + | carboxylesterase TERM 2201 1954314 - 1954328 + T 76 -10 -3.35197 | overlap 1954308 TGAGGGGTAGTTGTC GCCAAC TTC GTTGGC TTACTGTATATGCAC Sde_1515 1955377 - 1954421 - | hypothetical protein TERM 2202 1955095 - 1955079 - G 76 -2.3 -5.29846 | opp_overlap 1955079 1955080, overlap 1955080 AATGGCAAATAAAAA TTTGATA GCT TATCAAC TGTTCTTAATGCTAC Sde_1516 1956334 - 1955429 - | response regulator receiver domain-containing protein TERM 2203 1955967 - 1955985 + g 82 -6 -5.2204 | GGGCCTTGAATCCTT GTATAGGA ATA TCCAATAC TTTTTGTTCCTTCTA Sde_1517 1957363 - 1956365 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 2204 1956641 - 1956619 - G 72 -6.4 -4.27316 | opp_overlap 1956619 1956618 GCTGCCAACCCAAAA GTTCATAG GTACTGT CTATGAAC ATTTTATGAAGCCGT TERM 2205 1957048 - 1957068 + g 71 -9.7 -3.2218 | overlap 1957037 1957042 1957065 ATGTGGCCCCAAGCT CGGCCTGTA TTC TATGGGCCG TTGCTGGCTCTTGCC TERM 2206 1957830 - 1957849 + H 100 -11.4 -3.9279 | opp_overlap 1957830 AATTTGATTTCAAAA CGGGGTGC AATC GCACTCCG TTTCTCCCATTCCCT TERM 2207 1957849 - 1957830 - H 85 -9.2 -4.14511 | opp_overlap 1957830 AATTTGATTTCAAAA CGGGGTGC AATC GCACTCCG TTTCTCCCATTCCCT Sde_1518 1958049 - 1958891 + | hypothetical protein Sde_1519 1958894 - 1959325 + | hypothetical protein Sde_1520 1960079 - 1959354 - | putative phosphoprotein phosphatase Sde_1521 1960872 - 1960096 - | GTP-binding Sde_1522 1964438 - 1960893 - | hypothetical protein TERM 2208 1963714 - 1963724 + g 74 -5.4 -4.66163 | TGCTTTATTGCCGTT GCTT GTA AAGC TTTTTGAGTGGGCGT Sde_1523 1965859 - 1964450 - | hypothetical protein TERM 2209 1965160 - 1965189 + g 76 -2.2 -5.30575 | gap 1, overlap 1965162 ATTTCTCTCTGGATC TATGTAGTACGTC GTAAA GACG-ACTACGGA TTTTTTCAATTTTTA TERM 2210 1965740 - 1965758 + g 72 -5.8 -4.3767 | overlap 1965728 AGGTGTGCGCTTGCC GCCGGGGC GAG GGCGCGGC TTTATTATGGTCTGA Sde_1524 1967231 - 1965894 - | hypothetical protein TERM 2211 1966480 - 1966503 + g 71 -9.6 -3.23979 | TTAATATTGTTCAAG TGGCGTAGAG CCGG TTCTGCGCCA TTAATAAGTTGTAAT Sde_1525 1967797 - 1967303 - | hypothetical protein Sde_1526 1969016 - 1967820 - | FHA domain-containing protein TERM 2212 1967938 - 1967952 + g 73 -4.2 -4.74103 | overlap 1967937 TTTGCCCAATTTGCG GTGTAG AAA CTCCAC TTTTTAGATTGCGAC TERM 2213 1969595 - 1969607 + H 85 -4.1 -5.55769 | overlap 1969596 TAGCTATGTATGTTT TCTAG TGC CTAGG TTTTTTCTTATAAAA TERM 2214 1970479 - 1970499 + G 88 -3.9 -5.64421 | overlap 1970482 CCATTGCCGACGAGC CAGCATCCC CAA GCGATGATG TTTTTTCTTTAGCGT Sde_1527 1969782 - 1971800 + | Serine/threonine protein kinase-like Sde_1528 1971811 - 1972926 + | hypothetical protein Sde_1529 1973009 - 1973512 + | hypothetical protein TERM 2215 1974048 - 1974060 + G 72 -5.5 -4.48221 | CGGTATGTCTAACGT TGCGG CTG CTGCA TTTTGTCCGTTCCTA TERM 2216 1974187 - 1974206 + G 79 -7.8 -4.51196 | overlap 1974201 AAATGGCGCTCTTTC CGCGATTC TGAC GACTCGCG TTTTGTGAGTTTGGC Sde_1530 1973515 - 1974990 + | hypothetical protein TERM 2217 1975004 - 1975039 + F 100 -13.4 -3.53224 | opp_overlap 1974995 AGGTAACTGCTCTAA CTAGCTCAGCTTACTG TGAT TGGTAGGCTGGGCTAG TTTCGCAGAAAAGTA Sde_1531 1975157 - 1976710 + | hypothetical protein TERM 2218 1976780 - 1976767 - g 72 -8.1 -3.78419 | overlap 1976764 GCAGGAAATATACAA GCAGC ACTT GCTGC GATTGCAGAAGAGAT TERM 2219 1977121 - 1977109 - g 73 -4.1 -4.88736 | GAGCAGTTAGAAAAA GTAGT TAA ACCAC TTTGTTTGAACGTAA Sde_1532 1976725 - 1977558 + | hypothetical protein Sde_1533 1977562 - 1978059 + | hypothetical protein Sde_1534 1978052 - 1979887 + | hypothetical protein Sde_1535 1979911 - 1980900 + | hypothetical protein TERM 2220 1981373 - 1981357 - g 89 -10.9 -4.16016 | opp_overlap 1981355 TTAGTGGTGAAGAAA TTCGCAC TCA GTGCGAA ACCTTGTTGCGCGGT TERM 2221 1981583 - 1981568 - g 71 -6.8 -4.13421 | AAGAAAACAGAACAA CCCCAT TTTA ACGGGG GAGGCTGGTGTTGGT TERM 2222 1981661 - 1981633 - g 71 -7.3 -4.07568 | overlap 1981634 GTTTGGCCGTTAAAA TTGCGCAGGGGGA TGT TCCCACTGCGATA GAAAATGTAGAAATT TERM 2223 1982327 - 1982315 - g 71 -3.4 -4.74504 | ACTTGAAGTTAAAAA GGTA GGTAT TACC GAGCGCTACCAAAGC Sde_1536 1980897 - 1983590 + | fibronectin, type III Sde_1537 1983718 - 1984206 + | histidine kinase TERM 2224 1984214 - 1984238 + F 100 -13.5 -4.01071 | overlap 1984216 AGCGTTAATGTGTGT TTGCGGCGCGC ATT GCGCGTCGCTA TTTAGTTACTGTTCT TERM 2225 1984216 - 1984236 + F 100 -16.1 -3.58518 | overlap 1984214 CGTTAATGTGTGTTT GCGGCGCGC ATT GCGCGTCGC TATTTAGTTACTGTT TERM 2226 1984955 - 1984968 + G 81 -8.1 -4.40993 | opp_overlap 1984955 ATAGTCGAGATTCAA GCTGG TACA CCAGC TTTTGATCATTTCTC TERM 2227 1985100 - 1985082 - g 70 -2.4 -5.01732 | AAGGCTCGGAAAAAA TTAAAGGC GAT GCGCTTAA AATCCCAAAAGTTAC Sde_1538 1984325 - 1986190 + | two component LuxR family transcriptional regulator TERM 2228 1986218 - 1986237 + F 74 -10.6 -2.62157 | overlap 1986217 ACACTCAGCTTCATT CCCGCCCC TGTA GGGGCAGG CTTGTGCAGTTACTA Sde_1539 1986300 - 1986809 + | hypothetical protein Sde_1540 1987195 - 1986830 - | ATP-dependent helicase HrpB TERM 2229 1987118 - 1987128 + g 71 -6.8 -4.11216 | TTGCAGCTCTGGGTC GCGT TTT ACGC TTTTGGGGGTAAAAA Sde_1541 1987316 - 1987741 + | hypothetical protein TERM 2230 1987782 - 1987769 - f 76 -6.7 -4.56597 | opp_overlap 1987769, overlap 1987779 TCGCGCCGCTAAAAA CAGCT AGAC AGCTG TATATAACAACAGTA Sde_1542 1987808 - 1989745 + | DNA topoisomerase III Sde_1543 1989943 - 1990329 + | hypothetical protein Sde_1544 1990462 - 1991199 + | threonyl-tRNA synthetase, class IIA TERM 2231 1991529 - 1991516 - g 79 -2.4 -5.59502 | GAAAAAATTAAAAAA GCTA CGCGTT TAGC CAAAAAAGTAAAGGT TERM 2232 1991556 - 1991537 - g 74 -3.6 -5.08824 | overlap 1991538 CGTTTAGCCAAAAAA GTAAAGGT GTAC ACCTTTAA TAGCAAATCTGATGT Sde_1545 1991234 - 1991773 + | initiation factor 3 Sde_1546 1992775 - 1991873 - | ribosomal protein L35 TERM 2233 1992066 - 1992109 + g 82 -7.7 -4.7153 | gap 2, opp_overlap 1992066 1992085 1992086 ACAGAGCCTAATGCA CTTGTAGCACCTACAAATAGC CCAC GCT-TTTGTAGG-GCCATAAG TTTTTGCCATTGTTT TERM 2234 1993026 - 1993039 + G 84 -8.1 -4.56159 | opp_overlap 1993026 1993024, overlap 1993019 GCAAAGCATTTAATA CCTGC TGTG GCAGG TTTATATTTTCTTCG Sde_1547 1992986 - 1993390 + | ribosomal protein L20 TERM 2235 1993605 - 1993619 + G 73 -4.2 -4.74103 | AAAAAAGTATTTGAG CAACGG GTG CAGTTG TTTTTGCATTACACC Sde_1548 1993467 - 1994291 + | phenylalanyl-tRNA synthetase, alpha subunit Sde_1549 1994406 - 1995299 + | phenylalanyl-tRNA synthetase, beta subunit TERM 2236 1995293 - 1995303 + F 74 -4 -5.04385 | CACCTTGTTTGATAC TGAA TAA TTCA TTTTTTGGAGATGTA TERM 2237 1995484 - 1995463 - g 76 -4.3 -5.00616 | opp_overlap 1995464, overlap 1995464 GCTGGCCCTAAAAAA GTACGCCAG TTTA CGGGCGTAT TTGTGCTTGTATTAC TERM 2238 1995464 - 1995483 + G 73 -7.8 -4.14004 | opp_overlap 1995464 1995463 CTGGCCCTAAAAAAG TACGCCAG TTTA CGGGCGTA TTTGTGCTTGTATTA TERM 2239 1995537 - 1995552 + G 89 -4.7 -5.75822 | TTTGCAGCTGATTAG TGCAG AAATAC CTGCA TTTTTTTCGTTTGTG Sde_1550 1995367 - 1996518 + | AraC family transcriptional regulator TERM 2240 1996688 - 1996656 - T 72 -9.2 -3.22898 | gap 1, opp_overlap 1996658 1996660, overlap 1996654 1996658 AAAAAAGAGCCAAGA GATAGGGCGCCT-GC TTTG GCTAAGCGCCCTATA GTAGCGTTACGTTAA TERM 2241 1996686 - 1996658 - T 86 -11.8 -3.15274 | gap 1, opp_overlap 1996658 1996660, overlap 1996656 1996654 AAAAGAGCCAAGAGA TAGGGCGCCT-GC TTTG GCTAAGCGCCCTA TAGTAGCGTTACGTT Sde_1551 1997423 - 1996707 - | hypothetical protein TERM 2242 1997571 - 1997527 - R 71 -4.4 -4.88918 | opp_overlap 1997527, overlap 1997534 1997568 GGAGGGGAAAGAAAA GTTGAAATT-CGGCGATTACAC AGG GGGTAATCGCCGGAATAGC-AC GCTTATAGTGCGGCT TERM 2243 1997564 - 1997534 - R 100 -12.6 -3.81111 | opp_overlap 1997527, overlap 1997527 AAAGAAAAGTTGAAA TTCGGCGATTACAC AGG GGGTAATCGCCGGA ATAGCACGCTTATAG Sde_1552 1998080 - 1997574 - | thiol peroxidase (atypical 2-Cys peroxiredoxin) Sde_1553 1998604 - 1998200 - | hypothetical protein Sde_1554 1998814 - 1999659 + | GTP-binding protein TERM 2244 1999723 - 1999746 + T 100 -11.7 -5.80817 | opp_overlap 1999723 TAAGCAAATAAAAAA GGGGAGGCG CCTAAA CGCTTCCCC TTTTTTTGTGTTCGC TERM 2245 1999746 - 1999723 - T 100 -10.2 -5.72053 | opp_overlap 1999723 TAAGCAAATAAAAAA GGGGAGGCGC CTAA ACGCTTCCCC TTTTTTTGTGTTCGC Sde_1555 2000410 - 1999787 - | peptidyl-prolyl cis-trans isomerase FklB TERM 2246 2001136 - 2001156 + G 72 -9 -3.4926 | gap 1, overlap 2001134 CGGTAGAAGGCCTAA GCGC-CGAG CAAA CTCGCGCGC TGTTTCCCTATTTGT Sde_1556 2000631 - 2001182 + | hypothetical protein Sde_1557 2001987 - 2001193 - | hypothetical protein Sde_1558 2002033 - 2002893 + | putative RIO1/ZK632.3/MJ0444 family protein Sde_1559 2003128 - 2004723 + | diguanylate cyclase/phosphodiesterase TERM 2247 2004796 - 2004767 - f 81 -9.4 -3.89903 | opp_overlap 2004764 2004763 2004767 AAACAGTGGCATAAA GGTCAACTCAAT GTTTAA ATTGGGTTGACC TCCTATTTTCGTCAA TERM 2248 2004767 - 2004796 + F 83 -11.6 -2.96321 | opp_overlap 2004767, overlap 2004764 2004763 AAACAGTGGCATAAA GGTCAACTCAAT GTTTAA ATTGGGTTGACC TCCTATTTTCGTCAA Sde_1560 2004889 - 2005146 + | hypothetical protein Sde_1561 2005809 - 2005162 - | hypothetical protein Sde_1562 2005977 - 2006861 + | GGDEF TERM 2249 2006891 - 2006906 + T 100 -10.4 -6.06723 | CAATAGTAATGTTTA CCCAGC GCAC GCTGGG TTTTTTTTTCCAAAA TERM 2250 2007440 - 2007469 + T 75 -8.7 -3.60627 | gap 1, opp_overlap 2007439 2007440 ATGAAAAAATAAATG GGCCCGA-AAAC TTAGTGT GTTTATCGGGCC TTTGGGGTAGGGTGG Sde_1563 2008429 - 2007491 - | carboxynorspermidine decarboxylase TERM 2251 2008405 - 2008418 + g 70 -2.4 -5.08169 | ACGTTTTTTTTATAT TGCA ATTTAA TGCA TTTTTTACCATGTAT Sde_1564 2009565 - 2008423 - | hypothetical protein TERM 2252 2008518 - 2008508 - G 80 -6.8 -4.56597 | opp_overlap 2008508 GTTTGCGGTGAAAAA TCGG CAT CCGA TTGGTAATAAATAAA Sde_1565 2009856 - 2009602 - | arginine decarboxylase Sde_1566 2010367 - 2009849 - | hypothetical protein Sde_1567 2010956 - 2010381 - | hypothetical protein TERM 2253 2011301 - 2011352 + r 71 -8.8 -3.39288 | gap 2, opp_overlap 2011297 2011298, overlap 2011299 2011310 CGGGAATAATAGTTT CGCTGGCA--ATCCCGCACTGCCA AGTAAA TGGCAGCGCGGGATGCTTGCAGCG TGTTATTAACGGCTA TERM 2254 2011310 - 2011341 + r 100 -15.9 -2.72227 | opp_overlap 2011297 2011298, overlap 2011301 2011299 TAGTTTCGCTGGCAA TCCCGCACTGCCA AGTAAA TGGCAGCGCGGGA TGCTTGCAGCGTGTT Sde_1568 2012755 - 2011388 - | hypothetical protein Sde_1569 2016101 - 2012760 - | helix-turn-helix, AraC type TERM 2255 2015947 - 2015923 - G 70 -9.9 -3.02511 | TCTACCCCGCCAACA GGCTCACCGCC ACA GGCTGTTAGCC ATAGCGGCAGGCAAA TERM 2256 2016137 - 2016191 + H 100 -23.9 -4.20918 | CTTACGCTATCTTTA GGAGCCTCTGATTAGCCCCAATTAC TTTTT GCAGTTGGGGTTAATCAGAGGTTCC TTTATTCCAATTCGA TERM 2257 2016228 - 2016255 + G 100 -10.5 -4.87291 | overlap 2016232 TTTAATTGAATAGTG CGGGGGGGGGG GCGGCG CTCCCCCCTTG TTTTTGCTTACGATA TERM 2258 2016232 - 2016252 + G 100 -16.1 -4.53777 | overlap 2016228 ATTGAATAGTGCGGG GGGGGGGGC GGC GCTCCCCCC TTGTTTTTGCTTACG TERM 2259 2016519 - 2016501 - g 81 -5.2 -5.21709 | GGCGACATTAAAAAA GCGCAAGA GAA CCTTTCGC AATTGGGCATTTTAG TERM 2260 2017054 - 2017041 - g 70 -5.2 -4.46212 | overlap 2017048 TTTCGCAGTACAAAA GCCG AAACCA CGGC GGTAGAGTTAGAGGC Sde_1570 2016225 - 2018225 + | Signal transduction histidine kinase-like Sde_1571 2018922 - 2018239 - | XRE family transcriptional regulator Sde_1572 2020143 - 2019046 - | 3-hydroxyacyl-CoA dehydrogenase TERM 2261 2019097 - 2019085 - G 78 -4.7 -5.01732 | opp_overlap 2019096 AACCTGTTTAAAAAA CGCGC CTT GCTCG CTGGGGGTAAAATCC TERM 2262 2022832 - 2022813 - g 72 -5.7 -4.3778 | AAAAAAGAAATGAAA GGGCGTT ACCCTA AACACCC TTGGCCAGACGACCC Sde_1573 2020305 - 2022899 + | thiolase Sde_1574 2023410 - 2022949 - | trigger factor Sde_1575 2023607 - 2023407 - | peptidase S14, ClpP TERM 2263 2023835 - 2023816 - R 100 -10.8 -5.42514 | opp_overlap 2023816 CTAGAAACGAAAAAA GCCACTTA TTGC TAAGTGGC TTTTTCGAATTTGGC TERM 2264 2023816 - 2023835 + r 100 -10.8 -4.70879 | opp_overlap 2023816 CTAGAAACGAAAAAA GCCACTTA TTGC TAAGTGGC TTTTTCGAATTTGGC TERM 2265 2023947 - 2023968 + r 86 -8.1 -4.64766 | gap 1, opp_overlap 2023947, overlap 2023937 2023951 GGCTAGTGCCCGAAA GAGCGCGTAT ATT ATACGC-CTC TTTTTACCCTGTCAA TERM 2266 2024176 - 2024218 + r 91 -6.4 -5.43866 | opp_overlap 2024176 2024177, overlap 2024177 2024178 TATAGTCGTAAATAA TGTTCATCAAGCAGAAAAGT AAA ATATTTCCGCTTGATGAAGG TTTTTTTAAAGCTTG TERM 2267 2024177 - 2024217 + r 72 -7.7 -3.85235 | opp_overlap 2024177 2024176, overlap 2024176 2024178 ATAGTCGTAAATAAT GTTCATCAAGCAGAAAAGT AAA ATATTTCCGCTTGATGAAG GTTTTTTTAAAGCTT TERM 2268 2024178 - 2024216 + r 77 -11.2 -2.90056 | opp_overlap 2024177 2024176, overlap 2024177 2024176 TAGTCGTAAATAATG TTCATCAAGCAGAAAAGT AAA ATATTTCCGCTTGATGAA GGTTTTTTTAAAGCT Sde_1576 2026725 - 2024224 - | ClpX, ATPase regulatory subunit TERM 2269 2026568 - 2026581 + g 73 -2.3 -5.16841 | AAGTTAATGCCCATA GAGCT GGCA AGCGC TTTTTGTTGCTCTGG TERM 2270 2028442 - 2028453 + G 77 -7.2 -4.38712 | TGGCAATTACTGCCA GGCG AGGG CGCC TTTTATGGGCCTAAA Sde_1577 2027077 - 2028987 + | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase TERM 2271 2029401 - 2029391 - g 75 -3.2 -5.15969 | TTCGAAGCGAAAAAA GCAA AAG CTGC TGCTAAAAAGAAACA TERM 2272 2029639 - 2029617 - g 87 -11.4 -3.86897 | overlap 2029619 2029636 TGGATCTTGCAGAAA TAGGTACTGT TGA ACAGTACCCA AAAATGGAAGGTCGC TERM 2273 2029637 - 2029619 - g 86 -11.8 -3.5241 | overlap 2029617 2029636 GATCTTGCAGAAATA GGTACTGT TGA ACAGTACC CAAAAATGGAAGGTC infC 2029145 - 2029693 + | translation initiation factor IF-3 TERM 2274 2029752 - 2029791 + F 83 -12.2 -2.87344 | opp_overlap 2029757, overlap 2029755 ACACCGGAGGATTGC CAAAATTTGAAGGCGGCC TAAT GGGCGCCTTCAAACATTG TCTGTAAAGGCAATA TERM 2275 2029755 - 2029788 + F 70 -8.1 -3.58726 | opp_overlap 2029757, overlap 2029752 CCGGAGGATTGCCAA AATTTGAAGGCGGCC TAAT GGGCGCCTTCAAACA TTGTCTGTAAAGGCA TERM 2276 2029786 - 2029757 - f 100 -15.1 -4.12188 | opp_overlap 2029755 2029752 GGAGGATTGCCAAAA TTTGAAGGCGGCC TAAT GGGCGCCTTCAAA CATTGTCTGTAAAGG TERM 2277 2029812 - 2029834 + F 80 -10 -3.62597 | opp_overlap 2029816, overlap 2029816 AAAGGCAATAGTCAG CAAACAAGTG TTT TACTTGTTTG TTATTCAAGAGTGGC rpmI 2029928 - 2030122 + | 50S ribosomal protein L35 TERM 2278 2030426 - 2030414 - g 82 -7.7 -4.56597 | opp_overlap 2030413 CGCTGGTTTGAAAAA GGCAA GCA TTGCC CTTGATCGCCGCGTA TERM 2279 2030481 - 2030470 - g 72 -5.8 -4.4767 | CCATTCACGATAAAA CAGC ATTT GCTG CTATCGTTGCCAAAG rplT 2030160 - 2030519 + | 50S ribosomal protein L20 TERM 2280 2030594 - 2030573 - f 80 -10.1 -3.68569 | opp_overlap 2030573 CGATTCAGTCAAGAA GGGAAGGGC TTCG GCGCTTCCC TTTTTTGTTTTATAC TERM 2281 2030573 - 2030594 + F 100 -10.1 -5.86976 | opp_overlap 2030573 CGATTCAGTCAAGAA GGGAAGGGC TTCG GCGCTTCCC TTTTTTGTTTTATAC pheS 2030703 - 2031716 + | phenylalanyl-tRNA synthetase subunit alpha TERM 2282 2031781 - 2031747 - f 100 -7.9 -5.52079 | overlap 2031751 2031755 ATAGCAAAATAAAAA GTATTTAAGCGCTGG TCTTG CCAGCACTCAATCAC GACAACTCTATTAAA Sde_1582 2031764 - 2034214 + | phenylalanyl-tRNA synthetase beta subunit ihfA 2034219 - 2034524 + | integration host factor subunit alpha Sde_1584 2034505 - 2034861 + | MerR family transcriptional regulator Sde_1585 2035494 - 2035234 - | hypothetical protein TERM 2283 2036874 - 2036859 - g 85 -5.4 -5.42164 | TATAAAGAATAAAAA GCGAAC AATA ATTCGC AGTATTGTCGCGGTT TERM 2284 2037349 - 2037371 + G 75 -2.7 -5.16237 | overlap 2037344 2037339 CGCATCGATGGCGGC CCAGCTATG GCCGA TATGGTTGG TTTTTTAATGGAATT TERM 2285 2038406 - 2038419 + G 71 -9.5 -3.18383 | opp_overlap 2038405 2038406 TGCTTGGTGAAGAAG CGCCG GTAG CGGCG TTACTGACTGCAGCT Sde_1586 2036809 - 2038956 + | ribonuclease E and G TERM 2286 2039012 - 2038982 - f 100 -14 -3.60627 | opp_overlap 2038982 TTAGTTGATTTGAAA CGGGCGAGTAGCAC TTA GTGGTACTTGCCCG TTTTCGTAAAGGGAA TERM 2287 2038982 - 2039012 + F 100 -16.2 -4.25104 | opp_overlap 2038982 TTAGTTGATTTGAAA CGGGCGAGTAGCAC TTA GTGGTACTTGCCCG TTTTCGTAAAGGGAA Sde_1587 2039034 - 2040689 + | pseudouridine synthase, RluD TERM 2288 2040737 - 2040754 + T 100 -11.3 -6.23209 | opp_overlap 2040737 TCACCAAAGGCAAAA GCACTCG AATT CGAGTGC TTTTTTTTTGATTAA TERM 2289 2040754 - 2040737 - T 100 -11.3 -4.37711 | opp_overlap 2040737 TCACCAAAGGCAAAA GCACTCG AATT CGAGTGC TTTTTTTTTGATTAA Sde_1588 2043273 - 2040766 - | HAD family hydrolase Sde_1589 2043467 - 2044270 + | hypothetical protein TERM 2290 2044463 - 2044473 + G 70 -2.4 -5.00616 | GGAAAAAGTAGAGCT GGGG CGT CACC TTTTTTACGAAAAGC Sde_1590 2044263 - 2045459 + | cytochrome-c peroxidase Sde_1591 2045615 - 2046241 + | Maf-like protein TERM 2291 2047402 - 2047392 - g 73 -4.6 -4.75174 | TACCGAATTGAAAAA CGCG CAG CACG AACTTGAAAAACTGG Sde_1592 2046241 - 2048712 + | diguanylate cyclase/phosphodiesterase Sde_1593 2048836 - 2050062 + | ribosomal protein S32 TERM 2292 2050081 - 2050104 + T 79 -11.1 -3.05463 | opp_overlap 2050081, overlap 2050085 GCTGATTGTAAAAAA TAAACCCGC ATTACA GCGGGTTTA TTGGATCGCAAACCT TERM 2293 2050104 - 2050081 - T 100 -11.1 -5.0538 | opp_overlap 2050081 2050085 GCTGATTGTAAAAAA TAAACCCGC ATTACA GCGGGTTTA TTGGATCGCAAACCT TERM 2294 2050085 - 2050100 + T 73 -7.5 -4.20516 | opp_overlap 2050081, overlap 2050081 ATTGTAAAAAATAAA CCCGC ATTACA GCGGG TTTATTGGATCGCAA Sde_1594 2050413 - 2050129 - | Fatty acid synthesis plsX protein Sde_1595 2051159 - 2050455 - | response regulator receiver domain-containing protein Sde_1596 2052365 - 2051202 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 2295 2052339 - 2052311 - G 86 -11 -3.71848 | opp_overlap 2052316 TGGCTTTATCAACAA CGTAGCACGGGC TGGGT ACCCGTGTTACG TCTAAAGTGAATTTT Sde_1597 2053564 - 2052365 - | Acyl carrier protein (ACP) Sde_1598 2055541 - 2053622 - | arginine decarboxylase TERM 2296 2055716 - 2055700 - R 72 -9.4 -3.12668 | opp_overlap 2055699 2055689 CAGGGGGAGAGCGAA GCTGGG AGAAA CCCAGC CTCGCTTAAACTTAA Sde_1599 2056045 - 2055728 - | sigma 54 modulation protein, putative TERM 2297 2056264 - 2056253 - H 70 -5.8 -4.3851 | overlap 2056254 TAGAGCAAAGATAAA GGTG GGCC CACC ACTACATATTGAACG Sde_1600 2056591 - 2057100 + | aminodeoxychorismate lyase TERM 2298 2057123 - 2057140 + F 100 -12.7 -5.04601 | ATCTACTTTTTCTAA GGGCCGT TTTA ACGGCCC TTTTTCATTTCTAAA Sde_1601 2057167 - 2057814 + | thymidylate kinase Sde_1602 2058811 - 2057819 - | transcriptional regulator TERM 2299 2057859 - 2057881 + g 75 -2.6 -5.10497 | overlap 2057861 ACGGTTGTTCTGTAT TGGCTGGGTG TAA CACCTAACGA TTTTTTAAATAAATT TERM 2300 2059246 - 2059258 + G 88 -7.7 -5.00616 | opp_overlap 2059245 CACATTAGTAAGACG CCTAG AAA CTAGG TTTTTTGACCCGGAA Sde_1603 2059034 - 2060890 + | putative beta-ketoacyl synthase TERM 2301 2061252 - 2061237 - g 71 -7.6 -3.86346 | GTAGGGGTCTACAAA GAGCAA GAGC TTGCTC GGGTAGATTTACCCG Sde_1604 2061024 - 2061551 + | XRE family transcriptional regulator TERM 2302 2061746 - 2061763 + F 70 -7.1 -3.8822 | opp_overlap 2061746 CTGTGCATAATAGCA TTCAAAC AAGC GTTTGAA TTTGGGTTTGATCTA TERM 2303 2063322 - 2063302 - g 87 -6.9 -5.1101 | opp_overlap 2063300 GCATTAGGTAAAAAA GCAATTGTT GTT AACGATTGC CCTGGCTTTTTAGTC fadB 2061835 - 2064000 + | multifunctional fatty acid oxidation complex subunit alpha TERM 2304 2064553 - 2064540 - g 74 -5.9 -4.62984 | CGATCACACAGAAAA GCGGC TGAA GCCAC TGAGCAGGGTAAGTT fadA 2064003 - 2065178 + | 3-ketoacyl-CoA thiolase TERM 2305 2065213 - 2065247 + F 100 -8 -5.4111 | gap 1, opp_overlap 2065213, overlap 2065225 AAAGTTAGTAGGTAA GCCTCGAATAGCC CATGAATAAA GGCT-TTCGAGGC TTTTTTATGGTTATT TERM 2306 2065247 - 2065213 - f 74 -10.1 -3.10908 | gap 1, opp_overlap 2065213 2065225 AAAGTTAGTAGGTAA GCCTCGAATAGCCCAT GAAT AAAGGCT-TTCGAGGC TTTTTTATGGTTATT TERM 2307 2065383 - 2065370 - f 81 -5.3 -5.12474 | GACAAGATATAAAAA TAGCT AAAT AGCTA TATAAATCAACAAGT TERM 2308 2065715 - 2065681 - g 71 -10 -3.1634 | opp_overlap 2065686, overlap 2065673 2065685 CGCTAAACGACTCAA GGAAGCCGCTAAAACG GTT CGTATCAACGGTTTCC GTAAAGGCAAAGTGC Sde_1607 2065583 - 2066917 + | ankyrin TERM 2309 2066967 - 2066945 - f 100 -12 -5.25735 | opp_overlap 2066945 CTAAAAAATCAAAAA GCCCACCCTA TCT TAGTGTGGGC TTTTTTTATGGTCGC TERM 2310 2066945 - 2066967 + F 100 -12 -5.67063 | opp_overlap 2066945 CTAAAAAATCAAAAA GCCCACCCTA TCT TAGTGTGGGC TTTTTTTATGGTCGC Sde_1608 2067298 - 2067936 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 2311 2067960 - 2067996 + F 91 -8.2 -4.68593 | gap 1, opp_overlap 2067960 2067967 AGTTTGTACATATTA GATATAAGCAAAAGCTC AGTA GGGCATTTGCTT-TATC TTTTTAACTGCTAAA TERM 2312 2068522 - 2068512 - g 71 -6.8 -4.11216 | CCGGTAGCGGTAAAA CGCT ATT AGCG GAAACTCTAGCTCGC clpX 2068121 - 2069416 + | ATP-dependent protease ATP-binding subunit TERM 2313 2069462 - 2069447 - f 78 -7.5 -4.53705 | opp_overlap 2069447 AACTTCTATACAAAA GGGGC TTTTCG GCCCC TTTTTTTGTAATCCT TERM 2314 2069447 - 2069462 + F 100 -8.2 -5.67967 | opp_overlap 2069447 AACTTCTATACAAAA GGGGCT TTTC GGCCCC TTTTTTTGTAATCCT TERM 2315 2069764 - 2069741 - g 73 -9.6 -3.47322 | TCTGACGACAAGCAA GTGCTTCTTG TGGC CCAGAAGCAC GCATCTGTGGATGAC TERM 2316 2071107 - 2071093 - g 73 -2 -5.10526 | opp_overlap 2071095, overlap 2071095 AGACGAAAAAATAAA CATCGC TAC GCGCTA CCTTATTCCAAAGCA Sde_1610 2069588 - 2072005 + | Lon-A peptidase TERM 2317 2072028 - 2072010 - f 85 -6 -5.1675 | opp_overlap 2072013 2072022, overlap 2072020 2072021 GCACGCACTAAAAAA TACGACCA AAT TGGCCATA TTTGTACGAATTCCG TERM 2318 2072058 - 2072020 - f 70 -7.4 -3.89346 | opp_overlap 2072013 2072022, overlap 2072010 2072021 AAAAATACGACCAAA TTGGCCATATTTGTACGA ATT CCGCACAGATATGGCCTT GTCAGTGAAATAAAG TERM 2319 2072057 - 2072021 - f 79 -10.9 -2.91981 | opp_overlap 2072013 2072022, overlap 2072010 2072020 AAAATACGACCAAAT TGGCCATATTTGTACGA ATT CCGCACAGATATGGCCT TGTCAGTGAAATAAA TERM 2320 2072022 - 2072056 + F 100 -13.7 -3.36327 | opp_overlap 2072010 2072021 2072020, overlap 2072013 AAATACGACCAAATT GGCCATATTTGTACG AATTC CGCACAGATATGGCC TTGTCAGTGAAATAA TERM 2321 2072477 - 2072457 - g 87 -10.5 -4.07568 | TCGCCGCTGCTAAAA TACCTAGCT TTA AGCCAGGTA AAGCGTTAAAAGACG Sde_1611 2072231 - 2072503 + | nucleoid protein HU beta subunit TERM 2322 2072680 - 2072698 + F 95 -7.4 -5.4505 | opp_overlap 2072680 AGTAACACTTAAAAA GGCGCA TTTTCTT TGCGCC TTTTTTGTTAGAAAA TERM 2323 2072698 - 2072680 - f 85 -7.4 -4.75308 | opp_overlap 2072680 AGTAACACTTAAAAA GGCGCA TTTTCTT TGCGCC TTTTTTGTTAGAAAA TERM 2324 2073277 - 2073301 + G 70 -5 -4.44046 | opp_overlap 2073297, overlap 2073278 2073293 AGATAAATGCGCTAG TTGCGATTCT TAATC AGAAGCGCAG TTTCTTTGGAATCAC Sde_1612 2072736 - 2074601 + | peptidase M20D, amidohydrolase TERM 2325 2074655 - 2074642 - T 82 -8.1 -4.48987 | GCGCTATAATTAAAA GGCCT TAAC AGGCC CATCAAAAAGCCCAA TERM 2326 2074656 - 2074695 + T 100 -15.2 -4.41177 | opp_overlap 2074665, overlap 2074665 AGGCCTTAACAGGCC CATCAAAAAGCCCAAGCA TTAA TGCTTGGGCTTTTTTTTG TTTTGAATTTATCTG TERM 2327 2074686 - 2074665 - T 100 -14.5 -4.72986 | opp_overlap 2074656 2074665 CAGGCCCATCAAAAA GCCCAAGCA TTAA TGCTTGGGC TTTTTTTTGTTTTGA TERM 2328 2074665 - 2074686 + T 100 -14.5 -6.34616 | opp_overlap 2074665, overlap 2074656 CAGGCCCATCAAAAA GCCCAAGCA TTAA TGCTTGGGC TTTTTTTTGTTTTGA Sde_1613 2075522 - 2074704 - | glutamate racemase TERM 2329 2076629 - 2076640 + G 83 -4.4 -5.40873 | opp_overlap 2076629 AAACTTAGAAGGAAT TCGA ACAC TCGA TTTTGTTTTTGTATT TERM 2330 2076841 - 2076862 + G 78 -6.6 -4.56367 | TAGCGGCAAGTGCGG GCAAGCTG TACGAT CAGTTTGC TTTATTTGTAGACTC Sde_1614 2075661 - 2077145 + | hypothetical protein Sde_1615 2077147 - 2077620 + | hypothetical protein TERM 2331 2077637 - 2077668 + T 86 -11.6 -3.3452 | overlap 2077628 2077640 GCAGCGCATGAGGCG TGATTTGAGGCGGC TTAT GCCGCCCCAAATAA TTCTAAGCTAGTGTG TERM 2332 2077640 - 2077665 + T 93 -13.3 -2.84 | overlap 2077637 GCGCATGAGGCGTGA TTTGAGGCGGC TTAT GCCGCCCCAAA TAATTCTAAGCTAGT Sde_1616 2078789 - 2077692 - | tRNA (uracil-5-)-methyltransferase TERM 2333 2078181 - 2078197 + g 70 -2.2 -5.0538 | overlap 2078183 GTTTGCGGTGGCATC TACTGC CCATT GCAGCA TTTTTTGACATACGG Sde_1617 2079562 - 2078831 - | cellulose-binding family II protein TERM 2334 2079604 - 2079588 - R 100 -10.8 -5.67283 | opp_overlap 2079587 AACCCAAATAAAAAA CCCCGC TCAAG GCGGGG CTAGTGTAAAAGCTT Sde_1618 2080283 - 2079630 - | integral membrane protein TERM 2335 2080200 - 2080185 - G 76 -7.6 -4.3739 | opp_overlap 2080169 CATTGCCGCAGAAAA GGCAAT GGTC ATTGCC AATAATGCATATGTG TERM 2336 2080500 - 2080481 - R 100 -12.2 -5.81412 | opp_overlap 2080481 GGTAGGCAAAAAAAA GCCCAAAC AATT GTTTGGGC TTTTTAATATGGCGG TERM 2337 2080481 - 2080500 + r 100 -12.2 -4.8048 | opp_overlap 2080481 GGTAGGCAAAAAAAA GCCCAAAC AATT GTTTGGGC TTTTTAATATGGCGG Sde_1619 2083656 - 2080750 - | RNAse E TERM 2338 2083780 - 2083799 + H 70 -5.8 -4.3586 | gap 1 GTCGTATTTGGGGTG CTACT-CGT TAA ACGTAGTAG TTTTACTGTGGGTGA TERM 2339 2084315 - 2084328 + H 73 -3.7 -5.0538 | overlap 2084305 ATTGGCGGTGGGCCC CAGCG TTTT CGCGG TTTTTTCCGCTACAG TERM 2340 2084422 - 2084434 + H 75 -9.1 -3.66615 | opp_overlap 2084397 TTATATCTATTTAGC GCGCA ATT TGCGC TTCATGTTTTTATTC Sde_1620 2084805 - 2085770 + | ribosomal large subunit pseudouridine synthase C TERM 2341 2086057 - 2086067 + G 84 -8.2 -4.59511 | CCCAAGCGGATGTCA CGCC TTC GGCG TTTTTCCCGCGTGTT Sde_1621 2085819 - 2086463 + | TatD-related deoxyribonuclease Sde_1622 2086468 - 2087457 + | putative peptidase Sde_1623 2089348 - 2087438 - | hypothetical protein TERM 2342 2087504 - 2087527 + g 95 -14.6 -3.53779 | overlap 2087500 TTCTTCTTCTGTTTC GGCGAGCTGC GATC GCAGTTCGCC TTGCTGTTTTAACAG TERM 2343 2087599 - 2087611 + g 77 -3.3 -5.19328 | CGGCTAGCTCTTCTT CTAGC TTG GCGAG TTTTTCTTGTAGCGT Sde_1624 2089966 - 2089373 - | phosphoesterase, PA-phosphatase related TERM 2344 2090006 - 2089992 - H 93 -4.2 -5.80364 | AGTGCAAGAAAAAAA CGCC ATTTTGA GGCG AAAAGCCCTTTAAAT TERM 2345 2090106 - 2090094 - g 72 -9.1 -3.60098 | opp_overlap 2090093 AGGGTGCACCCCAAA TGCGG CTA CCGCA GTATATAGAACCTCG Sde_1625 2090093 - 2090614 + | hypothetical protein rpmF 2090651 - 2090833 + | 50S ribosomal protein L32 TERM 2346 2090872 - 2090893 + G 79 -10.1 -3.75153 | TCAGTTGACGCAATG GGCGGGGAT TTTG GTCCCCGTC TTTGCGTTGAAGCGG TERM 2347 2091167 - 2091182 + G 73 -7.6 -4.15222 | opp_overlap 2091167 ACACAGGCGCACTAA TGGCAA TTGG TTGCCA TTTATTAAAAACCAT Sde_1627 2090836 - 2091861 + | phosphate:acyl-[acyl carrier protein] acyltransferase TERM 2348 2092827 - 2092805 - g 82 -7.6 -4.67011 | overlap 2092808 2092809 AAGCGCATTCAAAAA TCATTGGCGG TTT CCGCCACAGA AACGACAGATTTGTT TERM 2349 2092823 - 2092809 - g 73 -11.4 -2.55361 | overlap 2092808 2092805 GCATTCAAAAATCAT TGGCGG TTT CCGCCA CAGAAACGACAGATT Sde_1628 2091923 - 2092867 + | [Acyl-carrier-protein] S-malonyltransferase Sde_1629 2092884 - 2093627 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 2350 2093994 - 2093981 - g 89 -6.7 -5.39221 | opp_overlap 2093987 AGAAGAAGTAAAAAA CGAAG CGTC CTTCG TTGAAGACTTAGGTG Sde_1630 2093907 - 2094143 + | pyridoxal phosphate-dependent deaminase TERM 2351 2094176 - 2094211 + F 100 -15 -4.94222 | gap 1, opp_overlap 2094181, overlap 2094181 CATTATTGATACACT CAAAAGCCGTTACTATG TTG CATAGT-GCGGCTTTTG TTTTTGTGGCTTATT TERM 2352 2094206 - 2094181 - f 74 -6.9 -4.26188 | gap 1, opp_overlap 2094176 2094181 TTGATACACTCAAAA GCCGTTACTATG TTG CATAGTG-CGGC TTTTGTTTTTGTGGC TERM 2353 2094181 - 2094206 + F 100 -9.1 -5.35224 | gap 1, opp_overlap 2094181, overlap 2094176 TTGATACACTCAAAA GCCGTTACTATG TTG CATAGT-GCGGC TTTTGTTTTTGTGGC TERM 2354 2094840 - 2094820 - g 78 -11.9 -2.94695 | opp_overlap 2094816 2094820, overlap 2094808 2094815 TTAGCAGTAAGTACA GCGTGTACC TCG GGTACACAC TCCATTGGCTTAGCT Sde_1631 2094334 - 2095566 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2355 2095568 - 2095599 + F 86 -11.7 -3.32228 | gap 1, opp_overlap 2095573, overlap 2095572 2095573 TCAAAAAAGTATAAT CTAAA-CGCTCGGC TTTGC GCCGAGCGCTTTGG TTGCTAATTAATTTT TERM 2356 2095572 - 2095594 + F 89 -10.5 -3.98113 | opp_overlap 2095573, overlap 2095568 2095573 AAAAGTATAATCTAA ACGCTCGGC TTTGC GCCGAGCGC TTTGGTTGCTAATTA TERM 2357 2095573 - 2095593 + F 100 -14 -2.98145 | opp_overlap 2095573, overlap 2095572 2095568 AAAGTATAATCTAAA CGCTCGGC TTTGC GCCGAGCG CTTTGGTTGCTAATT TERM 2358 2095593 - 2095573 - f 100 -14 -3.83756 | opp_overlap 2095572 2095568 2095573 AAAGTATAATCTAAA CGCTCGGC TTTGC GCCGAGCG CTTTGGTTGCTAATT Sde_1632 2095722 - 2096591 + | aminodeoxychorismate lyase apoprotein TERM 2359 2096619 - 2096594 - g 80 -5.5 -4.99043 | opp_overlap 2096595, overlap 2096595 GGGTGATAAATAAAA TGAGAAAGTTA ATAG TAACTCTCTCT TTATTCTTGGCTTTT TERM 2360 2096618 - 2096595 - g 72 -9 -3.58703 | opp_overlap 2096595, overlap 2096594 GGTGATAAATAAAAT GAGAAAGTTA ATAG TAACTCTCTC TTTATTCTTGGCTTT TERM 2361 2096595 - 2096618 + G 77 -6.8 -4.49364 | opp_overlap 2096595 2096594 GGTGATAAATAAAAT GAGAAAGTTA ATAG TAACTCTCTC TTTATTCTTGGCTTT TERM 2362 2097394 - 2097369 - g 73 -7.5 -4.09685 | opp_overlap 2097369, overlap 2097372 TGGGATGGGCGAAAA CTACGCGGGCA ATAT TACCCGCAAAG ATTTGAGAACACCTA Sde_1633 2096593 - 2097660 + | hypothetical protein TERM 2363 2097937 - 2097921 - g 76 -5 -4.81082 | AACCAAGTAATAAAA CCTGCG TTAGC CGCCGG TAAATGGGTGTTAAG Sde_1634 2097666 - 2098292 + | thymidylate kinase TERM 2364 2099397 - 2099376 - g 77 -7.1 -4.42788 | overlap 2099366 CCGAAGGCTACAAAA CCGCAGAGG TTAC CCGCGGCGG CGTAAATACCGATGA TERM 2365 2099474 - 2099444 - g 82 -5.4 -5.15969 | overlap 2099447 TTCGAAGCCAAAAAA GTACCCGGCCTATA CTT TATAGGCGAAGTGC TGGATGTCACTGGGT Sde_1635 2098337 - 2099554 + | hypothetical protein TERM 2366 2100328 - 2100312 - f 100 -13.7 -3.15544 | opp_overlap 2100306 CGCGACTGCCAGTAA TCGCGCG GAG CGCGCGA TTAAACCGTTCGTCA TERM 2367 2101681 - 2101668 - g 79 -4.5 -5.14563 | opp_overlap 2101674 2101675 GGTTGTATGAAAAAA CGCAA TTGC CTGCG GAGGAGGCGTTATTG Sde_1638 2100728 - 2103301 + | hypothetical protein Sde_1639 2104086 - 2103526 - | hypothetical protein TERM 2368 2104558 - 2104537 - g 70 -10.1 -3.05274 | overlap 2104534 GAAACTTATAAAGCA CGGTGCCGA TGTG TCGGCACAG GATAATAAGTCGTTT Sde_1640 2104355 - 2105248 + | hypothetical protein Sde_1641 2105793 - 2106266 + | transcription factor jumonji, jmjC Sde_1642 2107778 - 2106393 - | adenylosuccinate lyase TERM 2369 2107507 - 2107523 + g 72 -5.1 -4.66833 | TTATTGGTGTAGTAC TCGGC ACACGCG GCCGA TTTTTCGACTTCGGC Sde_1643 2109066 - 2107762 - | Xaa-Pro dipeptidase Sde_1644 2110298 - 2109063 - | diaminobutyrate--2-oxoglutarate aminotransferase TERM 2370 2110261 - 2110281 + g 75 -11.2 -3.03124 | TATACGCGGCTGTAG GCGCGAAT AGTAG ATTCGCGC TGTTCGAAAATAGAC TERM 2371 2110309 - 2110321 + r 84 -3.5 -5.4505 | GACATAATACATTCC TTAAA AAG TTTAA TTTTTTGTTCAGCAA Sde_1645 2111477 - 2110371 - | hippurate hydrolase TERM 2372 2110526 - 2110503 - G 70 -8.9 -3.40073 | ACGGCTACCAATTAA CGCGAATGC GCCTTG GCATTCACG AAGGTAATAGCTGAA TERM 2373 2111998 - 2112010 + H 74 -6.3 -4.4261 | opp_overlap 2111998 CGAGCGGTTAAGTTA GATCA TTG TGATC TTTTGCTGTTGAGCC Sde_1646 2112072 - 2112350 + | hypothetical protein Sde_1647 2114122 - 2112497 - | sigma-24 (FecI-like) TERM 2374 2113426 - 2113412 - G 76 -9.2 -3.68366 | CCACTTGAAAAGTAA GCCGCC TTT GACGGC ACCGGTACCTAGTAT Sde_1648 2114400 - 2115002 + | hypothetical protein TERM 2375 2115036 - 2115053 + F 70 -7.7 -3.6512 | ATTTACTGATGCTAA GGCTTCG TTGC TGAAGCC TTTCACGATTATTTA Sde_1649 2115151 - 2116377 + | MDO-like protein TERM 2376 2116499 - 2116529 + T 100 -15.4 -3.45366 | opp_overlap 2116495 2116494 AACTAGAAAATTGTG CGAGCTAGGTGGGC AAT GCCCACCTAGCAGG TTGATTAATTACGAA Sde_1650 2119291 - 2116547 - | pseudouridine synthase, Rsu Sde_1651 2120129 - 2119485 - | ribosomal large subunit pseudouridine synthase A TERM 2377 2120361 - 2120349 - g 71 -6.9 -4.15854 | opp_overlap 2120349 AAAGTTAGCCCAAAA GCGGG TTC CCCAC GCGCTGTTAATTACA Sde_1652 2120272 - 2121267 + | DNA polymerase III, delta prime subunit TERM 2378 2121722 - 2121712 - g 72 -3.2 -5.00136 | AAACAAAATAGAAAA CTAC TTA GCAG GTTCACTAGAATCAG Sde_1653 2121407 - 2121760 + | type 4 fimbrial biogenesis protein PilZ Sde_1654 2121871 - 2122647 + | ATPase TERM 2379 2122663 - 2122645 - T 77 -3.8 -5.093 | overlap 2122648 TTTAAAAGAACAAAA TAACAGCG AAG CGCTAATA GCTAACTCATAATAG TERM 2380 2122660 - 2122648 - T 73 -5.5 -4.59946 | overlap 2122645 AAAAGAACAAAATAA CAGCG AAG CGCTA ATAGCTAACTCATAA TERM 2381 2122673 - 2122716 + T 100 -13.5 -4.34859 | opp_overlap 2122664 2122676 CTAATAGCTAACTCA TAATAGCTAATCACTAGTA ATCAGC TACTAGCGATTAGCTATTG TTTATGTGTTTTAGT TERM 2382 2122713 - 2122676 - T 100 -15.9 -3.43117 | opp_overlap 2122673, overlap 2122664 ATAGCTAACTCATAA TAGCTAATCACTAGTAA TCAG CTACTAGCGATTAGCTA TTGTTTATGTGTTTT Sde_1655 2124427 - 2122727 - | translation initiation factor IF-1 Sde_1656 2125667 - 2124585 - | hypothetical protein Sde_1657 2126182 - 2125667 - | PAP2 superfamily protein Sde_1658 2126364 - 2126978 + | leucyl/phenylalanyl-tRNA--protein transferase Sde_1659 2127173 - 2128156 + | malate dehydrogenase TERM 2383 2128203 - 2128184 - f 100 -11.4 -4.56597 | opp_overlap 2128184 TTTCTGTTTTAAAAA CGCGCGAC TTAC ATCGCGCG TTTTTTTTTGCTTTA TERM 2384 2128184 - 2128203 + F 100 -10.7 -6.28631 | opp_overlap 2128184 TTTCTGTTTTAAAAA CGCGCGA CTTACA TCGCGCG TTTTTTTTTGCTTTA Sde_1660 2128360 - 2128836 + | putative bacterioferritin comigratory protein TERM 2385 2128883 - 2128853 - f 80 -9.8 -3.6053 | opp_overlap 2128852 2128849, overlap 2128849 2128854 GTGTGCATAAATGAA CTTGGCGCCATACT GGG AATATGGCGTCAAA ATGATTGATAACATG TERM 2386 2128882 - 2128854 - f 77 -11.1 -2.75997 | opp_overlap 2128852 2128849, overlap 2128853 2128849 TGTGCATAAATGAAC TTGGCGCCATACT GGG AATATGGCGTCAA AATGATTGATAACAT TERM 2387 2129153 - 2129198 + G 100 -15.7 -3.29043 | opp_overlap 2129151 2129166 CCGAGTCAAGACAGT TACGATATGAAGAGCCCGTTG GAGG CAATGGTCTATTCATATCGTA TTCTAGCCCACAGTT Sde_1661 2129078 - 2130079 + | AraC family transcriptional regulator Sde_1662 2130225 - 2130554 + | protein translocase subunit yajC TERM 2388 2130609 - 2130595 - f 100 -12.8 -4.21676 | opp_overlap 2130595 ACAACCTAGTTAAAA GGCCGC TTA GCGGCC TTTTTTGTGCCCGAT TERM 2389 2130595 - 2130609 + F 100 -12.8 -5.24531 | opp_overlap 2130595 ACAACCTAGTTAAAA GGCCGC TTA GCGGCC TTTTTTGTGCCCGAT Sde_1663 2130657 - 2131667 + | D-cysteine desulfhydrase Sde_1664 2131733 - 2133091 + | seryl-tRNA synthetase, class IIA TERM 2390 2133576 - 2133592 + G 100 -8.7 -5.31275 | ATTGCGTTTTGCGTT TGACGGC GAT GCCGTTA TTTTTTCTGATGAAG Sde_1665 2133094 - 2134008 + | uroporphyrin-III C-methyltransferase-like TERM 2391 2134061 - 2134051 - T 88 -3.2 -5.75538 | GCTAAAAAATAAAAA CTAG TGG CCAG CACCGGCAAAGAAGG Sde_1666 2134836 - 2134051 - | hypothetical protein TERM 2392 2134356 - 2134345 - G 77 -7.2 -4.386 | overlap 2134333 2134346 2134347 CAAGGCGGCACAAAA GGCG CCGG CGCC TACCGACGATAGAGT TERM 2393 2134904 - 2134920 + H 76 -6.7 -4.50259 | opp_overlap 2134890 2134903 2134904 2134906 ATAGCTATTTATAAC TATTCTT CAA AAGAATA TTTTCATATATTTTT cysB 2135028 - 2136002 + | transcriptional regulator CysB TERM 2394 2136048 - 2136021 - T 100 -14.2 -5.2197 | opp_overlap 2136021 GAGAAAAATTAAAAA GGCCAGTAAGAG GTAA CTCTTGCTGGCC TTTTTGCGTTTTGGG TERM 2395 2136021 - 2136048 + T 100 -16.4 -4.87318 | opp_overlap 2136021 GAGAAAAATTAAAAA GGCCAGTAAGAG GTAA CTCTTGCTGGCC TTTTTGCGTTTTGGG Sde_1668 2136454 - 2136119 - | hypothetical protein Sde_1669 2137191 - 2136466 - | phosphoadenosine phosphosulfate reductase TERM 2396 2137020 - 2137032 + g 72 -2.6 -5.07652 | TATCTAAACAAAACA CCTG AACGC CGGG TTTTATTTTAGAAGC Sde_1670 2137453 - 2138070 + | phosphoserine phosphatase TERM 2397 2138092 - 2138118 + T 100 -14.4 -5.63517 | opp_overlap 2138092 AGACTGTGAGTACAA GGCGCCCTAGGC TAA GTCTACGGCGCC TTTTTTATTTGAGAA TERM 2398 2138118 - 2138092 - T 91 -12.2 -3.41229 | opp_overlap 2138092 AGACTGTGAGTACAA GGCGCCCTAGGC TAA GTCTACGGCGCC TTTTTTATTTGAGAA Sde_1671 2139457 - 2138123 - | aminodeoxychorismate synthase, subunit I TERM 2399 2140272 - 2140256 - g 76 -2.3 -5.27923 | overlap 2140257 GAAGGCTATAAAAAA GCATTTA AAG TAAATGG GGTAGACCTGCTGCT Sde_1672 2140196 - 2140516 + | hypothetical protein Sde_1673 2141499 - 2140537 - | acyltransferase-like Sde_1674 2142746 - 2141595 - | hypothetical protein TERM 2400 2141824 - 2141811 - G 72 -8.1 -3.71649 | opp_overlap 2141811 TGGTGAAAGCGTAAA TGGCG TATT CGCCA TTTCTTCTGGTTCGA TERM 2401 2141811 - 2141824 + g 81 -8.1 -4.3953 | opp_overlap 2141811 TGGTGAAAGCGTAAA TGGCG TATT CGCCA TTTCTTCTGGTTCGA TERM 2402 2142173 - 2142189 + g 82 -10.9 -3.49568 | opp_overlap 2142172, overlap 2142171 CGTACAAAATATCAC CTGGGTT TAA AACCCAG TCTTCTTGTACATCA Sde_1675 2144189 - 2142810 - | adenylosuccinate lyase Sde_1676 2144960 - 2144331 - | hypothetical protein Sde_1677 2146153 - 2145011 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Sde_1678 2146298 - 2146714 + | hypothetical protein Sde_1679 2146764 - 2147114 + | CBS TERM 2403 2147213 - 2147199 - f 75 -8.6 -3.75897 | opp_overlap 2147198 AATTGCCAATTTAAA CCAAGT CTT ACTTGG ACTTGATTGGATGAT TERM 2404 2148643 - 2148631 - g 77 -9.1 -3.95022 | overlap 2148624 TTTATGAAGAGCAAA CGCTC ATA GAGCG AGATAAATCTGCAGC TERM 2405 2149761 - 2149748 - g 75 -6.7 -4.46233 | overlap 2149744 TGAAGGCGAAATAAA GCGTT TAAA AACGC TAAAGGCGAAGAACC Sde_1680 2147280 - 2149904 + | ATP-dependent helicase HepA TERM 2406 2149908 - 2149884 - T 100 -15.9 -3.02511 | GCCATTCGTTTAATA GTGATTACTCC TGC GGAGTAATCAC TAAAAGCTAAACAAC Sde_1681 2150223 - 2149915 - | isoamylase N-terminal domain-containing protein TERM 2407 2149942 - 2149963 + g 75 -10.1 -3.61946 | overlap 2149941 2149943 TACAGAGTTTTCGAT TGCGCCCAG TCCG CTGGGTGCG TATTTATCTGCAGTG TERM 2408 2149943 - 2149962 + g 74 -11.4 -2.76686 | overlap 2149942 2149941 ACAGAGTTTTCGATT GCGCCCAG TCCG CTGGGTGC GTATTTATCTGCAGT TERM 2409 2150053 - 2150068 + g 86 -4.6 -5.63103 | opp_overlap 2150046 TTCTAAATCGAGAGT TGTCGC GTAA GCGCCA TTTTTTTGCTTGCGA Sde_1682 2150849 - 2150391 - | SH3-like region TERM 2410 2150483 - 2150502 + g 72 -8.6 -3.68738 | GTACTAATGGGCTGC GCAGTTTG TTGC CAAGCTGC TTAATTTCTTCGAGC Sde_1683 2151495 - 2150854 - | ribosomal large subunit pseudouridine synthase E TERM 2411 2151137 - 2151167 + g 100 -6.8 -6.02546 | overlap 2151164 TCGCGCACAGGTGGG TTGCGCTCCCACAA GTT TTGCGGTGGTGCAA TTTTTTTTGCTTTAG TERM 2412 2151579 - 2151609 + H 95 -11.3 -3.78775 | gap 1, opp_overlap 2151578 2151577 TTTGAGTCGAAAACG CGTAAGTTCGTGCT GTAT GGC-CGAACTTACG TTTACTACTAAAGCC TERM 2413 2152242 - 2152224 - g 76 -5.2 -4.84359 | overlap 2152225 TTACGCTCAGAAAAA CCCACACA GCA TGGGTGAG TGGAAGTCTGATTCC Sde_1684 2151745 - 2153973 + | isocitrate dehydrogenase (NADP+) TERM 2414 2154019 - 2154002 - T 100 -12.7 -3.56568 | opp_overlap 2154002 GAATGAGTGTGTAAA GGGCTGG TAAT CCAGCCC TTTTTTTTGCTTCTA TERM 2415 2154002 - 2154019 + T 100 -12.7 -5.98781 | opp_overlap 2154002 GAATGAGTGTGTAAA GGGCTGG TAAT CCAGCCC TTTTTTTTGCTTCTA Sde_1685 2154390 - 2154121 - | cold-shock DNA-binding protein family protein clpS 2154629 - 2155003 + | ATP-dependent Clp protease adaptor protein ClpS TERM 2416 2155273 - 2155288 + G 73 -10.4 -3.07344 | opp_overlap 2155264 2155265, overlap 2155284 GCGAAACGCAGCCTA CGCTGG GGTT CCAGCG TGTATTGCAGCGTGC Sde_1687 2155032 - 2157317 + | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 2417 2157374 - 2157347 - T 100 -9.8 -5.28176 | opp_overlap 2157348, overlap 2157348 TTTAGGCACAAAAAA GCCCGCTAATGG TTAA CCAGTAGCGGGT TTTTTATGGAGTTTC TERM 2418 2157373 - 2157348 - T 100 -13.3 -3.76182 | opp_overlap 2157348, overlap 2157347 TTAGGCACAAAAAAG CCCGCTAATGG TTAA CCAGTAGCGGG TTTTTTATGGAGTTT TERM 2419 2157348 - 2157373 + T 100 -13.3 -5.28826 | opp_overlap 2157348 2157347 TTAGGCACAAAAAAG CCCGCTAATGG TTAA CCAGTAGCGGG TTTTTTATGGAGTTT Sde_1688 2157624 - 2157406 - | translation initiation factor 1 TERM 2420 2157751 - 2157723 - R 90 -11.2 -4.05788 | opp_overlap 2157723 GGCTTTGAAAGGAAA TGAGCCATAAAA TAAAC CTTTATGGCTCA TTTGAGAGAGGTTAT TERM 2421 2157723 - 2157751 + r 80 -10.5 -3.54638 | opp_overlap 2157723 GGCTTTGAAAGGAAA TGAGCCATAAA ATAAACC TTTATGGCTCA TTTGAGAGAGGTTAT Sde_1689 2160522 - 2157763 - | pseudouridine synthase, Rsu TERM 2422 2157878 - 2157904 + g 81 -5 -5.1523 | TGAACCTGCTCAGGG GTTAGCGCAAGC AAT GCCTGCTCAAAC TTTTTATCTTCTAGA TERM 2423 2160526 - 2160543 + r 79 -3.3 -5.31072 | overlap 2160528 GTATCCAATCATGTA TTGCTCC GTTT GGTGCGA TTTTTATTGTGTTCT Sde_1690 2161366 - 2160656 - | arginyl-tRNA-protein transferase TERM 2424 2160859 - 2160872 + g 100 -8.1 -5.30155 | CGAAAAAAGTGTACA CGGCA GATA TGCCG TTTTTTAGTTGGTCG aat 2162123 - 2161392 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 2425 2161674 - 2161661 - G 73 -2.3 -5.24531 | overlap 2161648 ATTCGCCATAAAAAA CGCGA TTGA TGGCG ATACCGTACAGGCCT Sde_1692 2163199 - 2162255 - | thioredoxin reductase 1 TERM 2426 2163282 - 2163298 + H 75 -3 -5.18371 | GTGATTTATGTATCT GATAGT CAAAC GCTATC TTTTGTTTTGTGCGA TERM 2427 2163616 - 2163601 - g 77 -6.8 -4.52589 | CGCCCCGATAGAAAA TGCCGG CGGC CCAGCA GGGGCAATGCTAGCA TERM 2428 2165657 - 2165667 + G 74 -8.2 -3.90291 | opp_overlap 2165656 2165657, overlap 2165656 AGAATTGGTTATAAC CGCG CCG CGCG TTTAATTGAGCAAAT Sde_1693 2163413 - 2165761 + | DNA translocase FtsK Sde_1694 2165801 - 2166427 + | periplasmic chaperone LolA TERM 2429 2167157 - 2167180 + G 79 -11 -3.39908 | overlap 2167148 2167155 2167152 GGTAACTGGTGATTT TCGCCGCTTT GATA AGGGCGGCGA TATCTTTTACGAGCA Sde_1695 2166432 - 2167766 + | recombination factor protein RarA TERM 2430 2168027 - 2168017 - g 82 -6.8 -4.85599 | opp_overlap 2168024, overlap 2168021 GTTATTGTAGAAAAA GCCA TGC TGGC ACCAGTGTGGCGCCA Sde_1696 2167921 - 2168220 + | camphor resistance protein CrcB TERM 2431 2168511 - 2168495 - g 74 -7.3 -4.28361 | opp_overlap 2168495 TGAAGCCGAGCAAAA CCTGCAA GCA TTGCAAG GTGAGTTGGAAGCGT Sde_1697 2168232 - 2169512 + | seryl-tRNA synthetase TERM 2432 2169501 - 2169536 + F 72 -9.2 -3.07256 | gap 1, opp_overlap 2169524, overlap 2169499 2169533 2169535 GGTAAAACGGTTATT GCTAAGGC-TTAGTTGG TAA CCAACTAACGGTTTAGC TAATTGTTTAGTTAG TERM 2433 2169599 - 2169578 - f 73 -10.1 -3.05463 | opp_overlap 2169578 ACTCCTGTTACGCAA TCGCCCCGT TAAA ATGGGGCGA TTTTGTTTTTACTCT TERM 2434 2169578 - 2169599 + F 100 -12.3 -5.32396 | opp_overlap 2169578 ACTCCTGTTACGCAA TCGCCCCGT TAAA ATGGGGCGA TTTTGTTTTTACTCT TERM 2435 2170560 - 2170546 - g 89 -9.2 -4.67353 | TTATGTAGGTAAAAA GCGCGC CGA GCACGC GGTACCGCAGCAAAA Sde_1698 2169734 - 2171110 + | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase Sde_1699 2171196 - 2171459 + | hypothetical protein Sde_1700 2171864 - 2171463 - | acetoin utilization protein AcuB, putative Sde_1701 2172548 - 2172015 - | hypothetical protein TERM 2436 2172145 - 2172129 - G 79 -3 -5.31519 | gap 1, overlap 2172115 2172141 ACAGCTAAAGAAAAA GCTGGCA ATAA TGC-AGC CCAATAGCAGCGGTT TERM 2437 2172503 - 2172535 + g 71 -3.6 -4.84761 | gap 2 CAGGATTATTGCGAA TCTTTACGGGGTCTGG AAT CCAG-CTCT-TAAAGA TTTTTCTAGGCATGT TERM 2438 2174827 - 2174866 + G 74 -7 -4.33928 | TTAAATACGCCGTTA GCTACCTGTGCTGCCGGT GAGC ATTGGCAGCTAGGGGAGC TTTCTGTTTCGCCTA Sde_1702 2172859 - 2175378 + | DNA internalization-related competence protein ComEC/Rec2 Sde_1703 2175816 - 2176994 + | hypothetical protein TERM 2439 2177036 - 2177051 + T 100 -10.4 -5.58454 | opp_overlap 2177036 ATCTAAACATAGAAA GGGCAC ATGT GTGCCC TTTTTTTGATATCAA TERM 2440 2177051 - 2177036 - T 100 -10.4 -4.28488 | opp_overlap 2177036 ATCTAAACATAGAAA GGGCAC ATGT GTGCCC TTTTTTTGATATCAA Sde_1704 2178738 - 2177107 - | glycosyl hydrolase family chitinase TERM 2441 2178769 - 2178754 - H 86 -7.6 -4.62872 | ACGAACCCCTAAAAA GCGTTA TTGC TAACGC AAATAAAGTGAATTC Sde_1705 2179121 - 2180110 + | hypothetical protein TERM 2442 2180201 - 2180241 + T 100 -12.7 -4.56597 | opp_overlap 2180208, overlap 2180208 TAAAGCCAGTTGGTA TAAAAAAGCCCCTGCAACA CTG TGTTGTAGGGGCTTATTAG TTTTTGCCGAGCAAG TERM 2443 2180234 - 2180208 - T 100 -15.2 -5.24531 | opp_overlap 2180201 2180208 AGTTGGTATAAAAAA GCCCCTGCAACA CTG TGTTGTAGGGGC TTATTAGTTTTTGCC TERM 2444 2180208 - 2180234 + T 100 -17.4 -4.0257 | opp_overlap 2180208, overlap 2180201 AGTTGGTATAAAAAA GCCCCTGCAACA CTG TGTTGTAGGGGC TTATTAGTTTTTGCC Sde_1706 2181464 - 2180262 - | signal peptide and transmembrane prediction Sde_1707 2182593 - 2181538 - | hypothetical protein Sde_1708 2183791 - 2182616 - | Gfo/Idh/MocA family oxidoreductase TERM 2445 2183923 - 2183911 - R 78 -9.1 -3.7795 | TTAAAGTTTATTAAA GCGCA GCT TGCGC AGTGCCTCCCGCGAG Sde_1709 2184999 - 2184079 - | hypothetical protein TERM 2446 2184625 - 2184636 + g 88 -5.8 -5.4833 | ATGTTTTTCGACGGT GAGC TTGC GCTC TTTTTTATTACCTGC TERM 2447 2184831 - 2184841 + g 80 -6.8 -4.65895 | overlap 2184827 CAAAGTTCTCTGGCT TGGC GAC GCCA TTTTTAAATGCGCGA Sde_1710 2185402 - 2186514 + | hypothetical protein Sde_1711 2187324 - 2186554 - | von Willebrand factor, type A TERM 2448 2187449 - 2187423 - R 100 -13.1 -3.59979 | opp_overlap 2187421 2187427 GCTGGGCAGGGGAAA GCAACACAGCT TAGTT AGCTGCGTTGC TCTGGATTAGTAGCG Sde_1712 2187866 - 2187471 - | CBS domain-containing protein Sde_1713 2188846 - 2188091 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 2449 2188279 - 2188264 - G 72 -5.4 -4.37886 | gap 1, opp_overlap 2188264 2188266, overlap 2188265 2188266 CTAGCCCGCATAAAA GC-GCTG CTT CAGCTGC GGCTTTATGTAATAA Sde_1714 2189420 - 2188851 - | peptidyl-prolyl cis-trans isomerase A TERM 2450 2189090 - 2189100 + g 72 -3.2 -5.03145 | overlap 2189078 GAGCCATGGATAATG TACC TAT GGTG TTTTTTAAGCCATTA Sde_1715 2190236 - 2189499 - | SH3 domain-containing protein Sde_1716 2190591 - 2190292 - | YciI-like protein Sde_1717 2191392 - 2190634 - | dihydroorotate dehydrogenase 2 TERM 2451 2191431 - 2191416 - H 73 -9 -3.52918 | overlap 2191412 TAATTGTTAAATTAA GAGTGG TTAT CCACTC GGAAAGACTATGACG Sde_1718 2191441 - 2192277 + | hypothetical protein TERM 2452 2193098 - 2193113 + G 71 -6.8 -4.14397 | overlap 2193099 AACCCGCGTGGGCTG TGGCGA TCCC TCGCCG TTTACTTTCTAGGCT Sde_1719 2192502 - 2193125 + | hypothetical protein Sde_1720 2193324 - 2194286 + | condensin subunit ScpA Sde_1721 2194316 - 2195374 + | condensin subunit ScpB Sde_1722 2195465 - 2196661 + | ribosomal large subunit pseudouridine synthase B TERM 2453 2196653 - 2196639 - T 84 -11.4 -3.21099 | opp_overlap 2196638 2196629 GGCCTGCAGGAGGAA GGGGCT CGA AGCCCC GTCGTTAGGCGTTTT TERM 2454 2196683 - 2196714 + T 93 -12.4 -3.19293 | gap 1, overlap 2196709 TAGCTTATTCAGTTG GTTCACGCAGTGCTA GAT TGGC-CTGCGTGAGC TTCGCTGTTGCGGTT Sde_1723 2197662 - 2196685 - | response regulator receiver domain-containing protein TERM 2455 2197820 - 2197837 + H 76 -2.6 -5.31456 | overlap 2197824 GCGAGGTGTTTTTTG GCGGCA AAAAAA TGGCGC TTTTTTGTCGGTTAA TERM 2456 2197930 - 2197948 + H 70 -7.4 -3.85817 | TTTCAGGCTGGTAAG TTGCGAGA ATG TCGCGCAA TTTCTGGGAGCGCAT Sde_1724 2197971 - 2198555 + | ATPase Sde_1725 2198558 - 2198917 + | diacylglycerol kinase Sde_1726 2200352 - 2198922 - | HD-GYP domain-containing protein Sde_1727 2200526 - 2201032 + | putative flavoprotein oxidoreductase Sde_1728 2202459 - 2201071 - | PAS/PAC sensor signal transduction histidine kinase TERM 2457 2201702 - 2201712 + g 79 -4.6 -5.1963 | TTCAAGTCTATATTC GCCT GCA GGGC TTTTTCTTGGTTGGC TERM 2458 2201913 - 2201926 + g 83 -9.5 -4.08767 | opp_overlap 2201908 2201907 2201905 2201902 GCAACAATACCGCTC CCGCG AGCG CGCGG TTTTGCGGCGATGGG TERM 2459 2202343 - 2202357 + g 83 -2.1 -5.72254 | GGCTATTTGCTCACC GGCAA GCGTG TTGTC TTTTTTCTTCTTTAG TERM 2460 2202942 - 2202921 - H 86 -8.7 -4.39166 | opp_overlap 2202921 CGCCATATACTAAAA GCCTTACTC GCAA GAGTAGGGC TTTTTTTATGCCTAC TERM 2461 2202921 - 2202942 + H 100 -10.9 -5.64274 | opp_overlap 2202921 CGCCATATACTAAAA GCCTTACTC GCAA GAGTAGGGC TTTTTTTATGCCTAC TERM 2462 2203307 - 2203331 + H 84 -10 -3.83324 | opp_overlap 2203306 ACTACCTTGATGAAT GCGCTGACCT TTAAT AAGTCAGCGC TTTAGATATTTGTAA TERM 2463 2203807 - 2203825 + G 86 -3 -5.66684 | opp_overlap 2203808, overlap 2203808 2203809 CAAATTAATTCTAAA TTGCTCGT CGA GCGGGCGG TTTTTTTCTGGGTTA Sde_1729 2203633 - 2204979 + | Na+/H+ antiporter NhaA TERM 2464 2205091 - 2205105 + G 75 -11.4 -3.04263 | TGTTGCGGTTTATTT GCGTCG AGA CGACGC TATTCACGCTAAGCT TERM 2465 2205312 - 2205302 - g 72 -8.2 -3.6682 | GGTGAGCGACCCAAA GGCG CAG CGCC AACTTTAGATGATCT Sde_1730 2204972 - 2205949 + | 1-aminocyclopropane-1-carboxylate deaminase TERM 2466 2206452 - 2206465 + G 74 -8.1 -3.84406 | AGAAATGATATTCGA CAGGC TTAA GCCTG TTATTGTGATGGCCG Sde_1731 2205946 - 2207076 + | hypothetical protein Sde_1732 2208150 - 2207101 - | hypothetical protein ppnK 2208225 - 2209109 + | inorganic polyphosphate/ATP-NAD kinase Sde_1734 2209128 - 2210144 + | serine/threonine protein phosphatase Sde_1735 2210178 - 2211200 + | GntR family transcriptional regulator TERM 2467 2211266 - 2211247 - f 74 -6.5 -4.50627 | TAGTTATCAAAGAAA TTGCTAG GTAGTG CTAGCAA ATAATACGGTGAAAG TERM 2468 2211412 - 2211401 - g 70 -2.2 -4.95618 | overlap 2211390 AAGAGCAAAAACAAA CCTG TATG CAAG CTGTTATTGCCTACG Sde_1736 2211283 - 2211552 + | phosphoesterase, PA-phosphatase related Sde_1737 2211549 - 2214221 + | alanyl aminopeptidase Sde_1738 2214480 - 2215040 + | hypothetical protein TERM 2469 2215430 - 2215441 + G 70 -2.2 -5.03314 | GCGCGACAAGCATAT TCGC TCTG GTGA TTTTTTCGAGGTAGA Sde_1739 2215131 - 2215742 + | hypothetical protein TERM 2470 2218506 - 2218494 - g 79 -10.5 -3.52192 | TTTAATGGCAGAGAA CGGCC GAC GGCCG CCAAGCTTGCGCGGC Sde_1740 2216113 - 2218734 + | hypothetical protein Sde_1741 2219536 - 2218766 - | protein phosphatase 2C-like Sde_1742 2221280 - 2219568 - | forkhead-associated Sde_1743 2223324 - 2221348 - | TPR domain-containing protein TERM 2471 2221464 - 2221448 - G 73 -7.9 -4.16016 | opp_overlap 2221448 2221433, overlap 2221436 TTATTGCGCAATAAA CCCGAAG GGT CGTCGGG TACTTTGCGCAGCCA Sde_1744 2224349 - 2223324 - | BatB protein, putative Sde_1745 2225058 - 2224342 - | hypothetical protein Sde_1746 2226041 - 2225055 - | ATPase TERM 2472 2225564 - 2225544 - G 95 -11.2 -4.66609 | overlap 2225549 CAGTTGATGCAAAAA GGCAAGCA TGGCG TGCTTGCC GCGCTTAGGGCGTAA Sde_1747 2227094 - 2226129 - | MoxR-like ATPase TERM 2473 2227045 - 2227058 + g 75 -6.7 -4.38092 | opp_overlap 2227044 GGTTGGCCCACAATT TGGCT GCTA AGCCA TTGTTTTAATTGTTG TERM 2474 2227506 - 2227516 + G 72 -5.4 -4.46742 | ATGGAGCGCCACCAG CGTT TAG AACG TTTGTTAGTTTATTT TERM 2475 2228236 - 2228223 - g 79 -2.4 -5.50499 | opp_overlap 2228223, overlap 2228225 2228231 2228233 GTATATTTAAAAAAA TTGC AACAGA GCAA AATTTTGTTGCTGAA Sde_1748 2227421 - 2232304 + | glutamate dehydrogenase (NAD) TERM 2476 2232516 - 2232479 - g 78 -12.8 -2.55544 | gap 1, overlap 2232467 2232464 GTACCAGCTAATGTA CGCCGGTGC-GGCCAAA CATGT TTTGGCCTACACCCGCG ATGGCCGCTCTATTC Sde_1749 2232408 - 2232641 + | hypothetical protein Sde_1750 2232734 - 2233753 + | dihydroorotate oxidase A TERM 2477 2233768 - 2233786 + T 93 -11 -4.17023 | GAACGCCTCCTGACT GGCTCGTA GAT TGCGAGCC TTTTGCCCTCGTTAC Sde_1751 2234264 - 2234058 - | ribosome modulation factor TERM 2478 2234623 - 2234578 - H 73 -2.7 -5.16572 | gap 1, opp_overlap 2234593, overlap 2234581 2234595 AGTGAATGTAAAAAA TAATTGCTCGGTAACCAGCTAA AAG TTAGC-GGTTAAGTAGCAATAA ATTTAAAAAGCAAAT Sde_1752 2235298 - 2237556 + | 23S rRNA m(2)G2445 methyltransferase Sde_1753 2237679 - 2239679 + | excinuclease ABC subunit B TERM 2479 2239726 - 2239693 - T 82 -6.8 -4.82154 | opp_overlap 2239700, overlap 2239694 AAGCCACACCAAAAA CCAACTAGGGCT TAATGGATGT AGCCCTAGTTGC AGTCAGTTTATACCA TERM 2480 2239725 - 2239694 - T 80 -10.3 -3.48208 | opp_overlap 2239700, overlap 2239693 AGCCACACCAAAAAC CAACTAGGGCT TAATGGATGT AGCCCTAGTTG CAGTCAGTTTATACC Sde_1754 2240273 - 2239743 - | peptidase S24, LexA repressor TERM 2481 2240336 - 2240366 + H 75 -8.5 -3.87815 | gap 2 TGTATGGTTTTAGTG CGACTGTATGCTTGC AGT GCAA-CATACAG-CG TTTATGGGCCTAAGA TERM 2482 2240439 - 2240449 + H 79 -6.8 -4.72986 | ATTATTAACTTCAAG CGCT ATT AGCG TTTTTGCTGAGGGTA TERM 2483 2241652 - 2241639 - g 71 -3.8 -4.78107 | GATTACTATGAAAAA GGCA TGCGAG TGCC CGACGATATAACGCT Sde_1755 2240475 - 2243402 + | hypothetical protein TERM 2484 2243435 - 2243457 + F 100 -16.4 -2.94144 | opp_overlap 2243439, overlap 2243439 GTTAATGTTTATTTT TAAAGGCGCC ATT GGCGCCTTTA TCGTTTAAGTGCACA TERM 2485 2243439 - 2243453 + F 100 -12.8 -4.14725 | opp_overlap 2243439, overlap 2243435 ATGTTTATTTTTAAA GGCGCC ATT GGCGCC TTTATCGTTTAAGTG TERM 2486 2243453 - 2243439 - f 100 -12.8 -3.57263 | opp_overlap 2243435 2243439 ATGTTTATTTTTAAA GGCGCC ATT GGCGCC TTTATCGTTTAAGTG TERM 2487 2243900 - 2243877 - g 78 -5.9 -4.82855 | opp_overlap 2243880, overlap 2243891 CAGTAAACCCAAAAA GCACTAGCG CAATAT CGCTGGCGC AAGCTTCTGGAAATA TERM 2488 2244130 - 2244116 - g 76 -4.2 -5.05228 | overlap 2244117 ATGAAAGTAGAAAAA GGCCAA GTA TTGGCA ACGCTCGACGATGCT Sde_1756 2243684 - 2244775 + | acriflavin resistance protein Sde_1757 2244819 - 2245526 + | ABC transporter ATP-binding protein Sde_1758 2245538 - 2246701 + | putative ABC transport system permease protein Sde_1759 2246705 - 2247895 + | hypothetical protein TERM 2489 2247952 - 2247921 - T 100 -14.7 -3.62046 | opp_overlap 2247927, overlap 2247927 TTAGTTTTCTAACAA TAAAAAGGGTGAC TTAGTG GTCACCCTTTTTA TGCGCAGTACTATTG TERM 2490 2247946 - 2247927 - T 100 -9.3 -5.29445 | opp_overlap 2247927, overlap 2247921 TTCTAACAATAAAAA GGGTGAC TTAGTG GTCACCC TTTTTATGCGCAGTA TERM 2491 2247927 - 2247946 + T 100 -10 -4.83615 | opp_overlap 2247927 2247921 TTCTAACAATAAAAA GGGTGACT TAGT GGTCACCC TTTTTATGCGCAGTA Sde_1760 2248696 - 2247962 - | hypothetical protein TERM 2492 2248797 - 2248826 + r 77 -8.6 -4.06361 | opp_overlap 2248794, overlap 2248794 ATTTATTAAGTATGG GTTTGGGTCCCA TTTATT TGGGAGCCAAGC TTTGATTATCTCTGG Sde_1761 2249679 - 2248810 - | cold shock protein Sde_1762 2251070 - 2249676 - | Na(+)/H(+) antiporter 1 TERM 2493 2250793 - 2250783 - G 82 -2.6 -5.52807 | AACAACAAAGAAAAA TAAT GCC ATTA AGCCGTCGTTAACCC TERM 2494 2251170 - 2251152 - R 83 -8.9 -4.15833 | AGTATTATTTTAAAA GGCTTAC TGTGT GTAAGCC CGAAGCCTGCATTTA TERM 2495 2251511 - 2251486 - R 90 -11.3 -3.64703 | opp_overlap 2251489, overlap 2251489 GTGCTTCTAGGTAAA TAAGCGCACTT GTTA AAGTGCACTTA TCGAATCGCATACCT TERM 2496 2251508 - 2251489 - R 77 -8.6 -3.96216 | opp_overlap 2251489, overlap 2251486 CTTCTAGGTAAATAA GCGCACTT GTTA AAGTGCAC TTATCGAATCGCATA Sde_1763 2251824 - 2251498 - | transcription-repair coupling factor Sde_1764 2252914 - 2251925 - | Na-translocating NADH-quinone reductase subunit A Sde_1765 2253648 - 2253016 - | NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit Sde_1766 2254712 - 2253912 - | NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit TERM 2497 2254231 - 2254242 + g 75 -3 -5.20783 | TTTTTAATTTGCAGG CAAT AGTC ATTG TTTTTGTATTTGACT TERM 2498 2254843 - 2254816 - R 100 -14.3 -3.02745 | overlap 2254813 2254818 GGTATCTAGAAAGGA TACTCTAGCGC GTGTAA GCGCTAGAGTA GGGTGGTAGGTGGCT TERM 2499 2254841 - 2254818 - R 93 -12.5 -3.06711 | overlap 2254816 2254813 TATCTAGAAAGGATA CTCTAGCGC GTGTAA GCGCTAGAG TAGGGTGGTAGGTGG Sde_1767 2256462 - 2254858 - | NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit TERM 2500 2254905 - 2254921 + g 76 -5.1 -4.78107 | TAGCGGGTAGCTTAA CGGTAAG GGT TTTGCCG TTTTTGCTAATGCTG Sde_1768 2257271 - 2256588 - | GntR family transcriptional regulator TERM 2501 2257295 - 2257314 + r 74 -6.4 -4.44548 | CAAAGTAGTTCTACA GTTGCAGC CTAT GTTGCGAC TTTTCATTGAGTATA Sde_1769 2258270 - 2257587 - | NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Sde_1770 2260698 - 2258260 - | glycosyltransferase TERM 2502 2259312 - 2259283 - G 77 -3.5 -5.15167 | gap 1, opp_overlap 2259284 2259286 2259288, overlap 2259286 2259288 CAGTAGGAATAAAAA TAACCCCAAGGGCA GGG CGCCCATGGTG-TA TTTACTTAGCATGCC TERM 2503 2259310 - 2259286 - G 82 -7.7 -4.66002 | opp_overlap 2259284 2259286 2259288, overlap 2259283 2259288 TAGGAATAAAAATAA CCCCAAGGGCA GGG CGCCCATGGTG TATTTACTTAGCATG TERM 2504 2259593 - 2259570 - G 70 -5.3 -4.53303 | CACCGGCATACAAAA TTGCGGCCA TACTTT TAACCGCAA ATATAGAGTCACCTA Sde_1771 2262408 - 2260831 - | hypothetical protein TERM 2505 2262361 - 2262343 - G 89 -4.5 -5.76949 | overlap 2262348 CAGGCCCAAAAAAAA GCTAAGC GCTAT GCATAGC CCTATAAACGCCGGT Sde_1772 2263454 - 2262411 - | putative glycosyltransferase transmembrane protein Sde_1773 2264386 - 2263475 - | hypothetical protein Sde_1774 2265292 - 2264498 - | serine/threonine protein phosphatase-like TERM 2506 2265032 - 2265042 + g 76 -4.6 -4.92783 | opp_overlap 2265028, overlap 2265029 2265028 TTCGCCACCAATGCC GCGT TCG GCGC TTTTTATAATGGCTT Sde_1775 2265413 - 2266321 + | hypothetical protein Sde_1776 2266517 - 2267767 + | LolC/E family lipoprotein releasing system, transmembrane protein Sde_1777 2267852 - 2268124 + | lipoprotein releasing system, ATP-binding protein Sde_1778 2270135 - 2268126 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 2507 2269275 - 2269331 + g 70 -5.2 -4.4009 | gap 2, opp_overlap 2269271 2269270 GCTAAACAAATGCTG CGCTTCGTAGCGCTCCCACTGCTTAA CGGCATC TTTAG-GGTTGGAGCGC-GCGTAGCG TTTTATACCGTAGGC TERM 2508 2269481 - 2269494 + g 76 -8.1 -4.1157 | opp_overlap 2269479 AGCGGGTCACATAGC GCGCA AGAC TGCGC TTATTGTTGTTCATG TERM 2509 2270291 - 2270258 - H 74 -10.6 -2.71731 | gap 1, opp_overlap 2270261 2270267, overlap 2270267 TTTAGTGCCTAACTA GCGGAAAAA-TAGAA GGTTT TTCTAATTTTTCCGC ATAAAAAGGTATAAA TERM 2510 2271143 - 2271129 - g 76 -9.2 -3.74693 | overlap 2271140 CGTCAGGGCATTAAA GCGCGC AGA ACGCGC AACGAAGGTCGCGTT TERM 2511 2271979 - 2271951 - g 80 -5.9 -5.0133 | opp_overlap 2271955, overlap 2271954 2271955 GAGGCGCCTAAAAAA GAAGCTGCAAGCC CTA AGCCTGCAGTATC TAAGCCGGCAACACC TERM 2512 2271976 - 2271954 - g 78 -6.2 -4.61482 | opp_overlap 2271955, overlap 2271951 2271955 GCGCCTAAAAAAGAA GCTGCAAGCC CTA AGCCTGCAGT ATCTAAGCCGGCAAC TERM 2513 2271975 - 2271955 - g 73 -9.7 -3.36166 | opp_overlap 2271955, overlap 2271954 2271951 CGCCTAAAAAAGAAG CTGCAAGCC CTA AGCCTGCAG TATCTAAGCCGGCAA Sde_1779 2270319 - 2272232 + | ABC transporter, ATP-binding protein TERM 2514 2272246 - 2272280 + T 100 -11.5 -4.26589 | opp_overlap 2272253, overlap 2272248 AGGTTTGTAAACCTG TACTAGAGGCCACGT TAATT ATGCGGCCTCTAGTG TTTTCGCTGTATGCT TERM 2515 2272248 - 2272278 + T 93 -11.9 -3.72985 | opp_overlap 2272253, overlap 2272246 GTTTGTAAACCTGTA CTAGAGGCCACGT TAATT ATGCGGCCTCTAG TGTTTTCGCTGTATG Sde_1780 2272758 - 2272309 - | universal stress protein TERM 2516 2273059 - 2273042 - g 71 -9.9 -3.21695 | CGAGCACTAAGTGAA TTGCGCA GTGC TGCGCAA AAGAAAGGGCTGCGA TERM 2517 2273259 - 2273245 - g 72 -6.4 -4.25104 | opp_overlap 2273245 TTGGGCCGACGAAAA TCAGGC TTT GCCTAA TATTGCCGCGCAATT Sde_1781 2272943 - 2273437 + | hypothetical protein Sde_1782 2274236 - 2273427 - | hypothetical protein TERM 2518 2274222 - 2274203 - G 70 -2.2 -4.94243 | gap 1, overlap 2274205 2274206 TCAAAAAAATCAAAA TAGTGCCTG GGT CAGACA-TA AAACATGGGCTCATT TERM 2519 2275149 - 2275138 - g 83 -2.2 -5.66684 | gap 1, opp_overlap 2275146, overlap 2275126 2275139 TAACCCAGAAAAAAA CTGGG AAG CCC-G TTACGAGATTCTGCC TERM 2520 2277213 - 2277233 + G 72 -5.3 -4.67982 | ACGATACCTACGTAT TGCGCGATG GTG CTTCGGGCA TTTTCTTGGCTGCGA Sde_1783 2274869 - 2277580 + | DNA topoisomerase I TERM 2521 2277609 - 2277640 + F 100 -16.8 -3.17075 | opp_overlap 2277609 AATTGTGTGTTAAAA CTATCCCTCAAAGA GCAA TCTTTGGGGGATAG TTGCATTGGGGCAAA TERM 2522 2277640 - 2277609 - f 100 -14.6 -4.08064 | opp_overlap 2277609 AATTGTGTGTTAAAA CTATCCCTCAAAGA GCAA TCTTTGGGGGATAG TTGCATTGGGGCAAA Sde_1784 2277675 - 2278181 + | hypothetical protein Sde_1785 2278318 - 2278587 + | hypothetical protein Sde_1786 2279264 - 2278845 - | hypothetical protein Sde_1787 2279872 - 2279267 - | LexA repressor Sde_1788 2280293 - 2279976 - | hypothetical protein Sde_1789 2280758 - 2281390 + | TetR family transcriptional regulator TERM 2523 2281484 - 2281469 - g 76 -7.5 -4.20768 | opp_overlap 2281469 AGCGCTAATAAAGAA CCCGC TAATTG GCGGG TTAATACTGTTTACC Sde_1790 2281377 - 2282411 + | glycosyl hydrolase TERM 2524 2282527 - 2282543 + G 83 -4.4 -5.35721 | opp_overlap 2282522 2282527, overlap 2282518 AGCAGGCAAAGAAAA CCTTTG GATTG CAGAGG TTTTTATTGTTGTGT TERM 2525 2282543 - 2282527 - g 70 -2.2 -4.9138 | opp_overlap 2282527 2282518, overlap 2282522 AGCAGGCAAAGAAAA CCTTTG GATTG CAGAGG TTTTTATTGTTGTGT Sde_1791 2282468 - 2283577 + | small-conductance mechanosensitive channel Sde_1792 2283584 - 2284159 + | hypoxanthine phosphoribosyltransferase Sde_1793 2284181 - 2284939 + | methylthioadenosine phosphorylase Sde_1794 2285042 - 2285269 + | cold-shock DNA-binding protein family protein TERM 2526 2285292 - 2285343 + T 100 -23.4 -3.17797 | opp_overlap 2285299, overlap 2285299 TACTCTTTAAGCATT TAGAAAACCCAGTGCAGTTTAGGT GTTT GCCTAATCTGCACTGGGTTTTTTA TTGGCTGTGTCTAAA TERM 2527 2285299 - 2285336 + T 100 -19.3 -5.49234 | opp_overlap 2285299, overlap 2285292 TAAGCATTTAGAAAA CCCAGTGCAGTTTAGGT GTTT GCCTAATCTGCACTGGG TTTTTTATTGGCTGT TERM 2528 2285336 - 2285299 - T 100 -18.6 -4.44915 | opp_overlap 2285299 2285292 TAAGCATTTAGAAAA CCCAGTGCAGTTTAGG TGTTTG CCTAATCTGCACTGGG TTTTTTATTGGCTGT Sde_1795 2286393 - 2285359 - | hypothetical protein Sde_1796 2289861 - 2286400 - | transcription-repair coupling protein Mfd TERM 2529 2290365 - 2290351 - H 74 -5 -4.89477 | CCTTCAAGAAGAAAA TACACG TTT CGTATA AATATTGGTGCTTTA TERM 2530 2290703 - 2290677 - g 89 -5.1 -5.64274 | opp_overlap 2290684 TCACCGATAAAAAAA CAGTAGGGGTA AAATA TACCTCTCCTG CGGCTGGTACCGTAT Sde_1797 2290490 - 2291833 + | Na(+)-translocating NADH-quinone reductase subunit A Sde_1798 2291836 - 2293041 + | Na(+)-translocating NADH-quinone reductase subunit B Sde_1799 2293034 - 2293810 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 2531 2294319 - 2294307 - g 70 -9.1 -3.33815 | opp_overlap 2294303 AGTTGCTTGAACTAA CCACC AAT GGTGG CTGGTATGTGGCTAA Sde_1800 2293814 - 2294476 + | Na(+)-translocating NADH-quinone reductase subunit D Sde_1801 2294476 - 2295084 + | Na(+)-translocating NADH-quinone reductase subunit E Sde_1802 2295105 - 2296328 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 2532 2296356 - 2296390 + G 100 -13.7 -5.4588 | gap 1, opp_overlap 2296361, overlap 2296361 TTAGTAATCCTATCC CAAAAGCGAGGC-CGG TTTT CCGTGCCTCGCTTTTC TTTTTTCTGATTTTC TERM 2533 2296361 - 2296385 + G 100 -13.6 -5.49579 | gap 1, opp_overlap 2296361, overlap 2296356 AATCCTATCCCAAAA GCGAGGC-CGG TTTT CCGTGCCTCGC TTTTCTTTTTTCTGA TERM 2534 2296385 - 2296361 - g 100 -13.6 -4.14511 | gap 1, opp_overlap 2296361 2296356 AATCCTATCCCAAAA GCGAGGC-CGG TTTT CCGTGCCTCGC TTTTCTTTTTTCTGA TERM 2535 2296553 - 2296568 + G 74 -5.4 -4.63007 | GTAGATGAGGAGTTA CGTCGT ATTA ACGATG TTTTATCTACTTATA TERM 2536 2297282 - 2297310 + G 73 -4.5 -4.89477 | overlap 2297285 GTTGAAGGTTATGCC TTAGCAGAAAAGC TTA GCTTGGCTGCTTA TTTTATTATTAGAGA TERM 2537 2297285 - 2297307 + G 75 -6.2 -4.54297 | overlap 2297282 GAAGGTTATGCCTTA GCAGAAAAGC TTA GCTTGGCTGC TTATTTTATTATTAG Sde_1803 2296337 - 2297386 + | thiamine biosynthesis lipoprotein TERM 2538 2297617 - 2297597 - g 87 -6.9 -5.17353 | ATACTGACCAAAAAA CTTTACCCG GTG CAAGTAAAG ATCTCGCCTACGACG Sde_1804 2297383 - 2297652 + | hypothetical protein TERM 2539 2297997 - 2298019 + G 88 -7.7 -4.9725 | overlap 2297993 CACGCAATCGGGTGC GCGTGCACT CTGGT AATGCACGC TTTTTATCTAACACT Sde_1805 2297669 - 2299069 + | soluble pyridine nucleotide transhydrogenase TERM 2540 2299138 - 2299124 - f 84 -11.4 -3.17901 | opp_overlap 2299124 ATACTCTCAACTGAA TGCCGC CTA GCGGCA TTTTTTATGCCCGTA TERM 2541 2299124 - 2299138 + F 100 -11.4 -5.252 | opp_overlap 2299124 ATACTCTCAACTGAA TGCCGC CTA GCGGCA TTTTTTATGCCCGTA TERM 2542 2299615 - 2299601 - g 72 -4.9 -4.63218 | opp_overlap 2299605, overlap 2299602 2299603 2299605 GCGCCGCCAACAAAA GGCAG TATGG CCGCC AGATGCCCATACTGT TERM 2543 2299687 - 2299712 + G 73 -10.4 -3.08642 | TGACTATGACTTTGC CCGCAAGCCC AGTTAC GGGCTTGAGG TTGGATAAATCCTAT Sde_1806 2299179 - 2300279 + | hypothetical protein TERM 2544 2300312 - 2300333 + T 71 -8.7 -3.35816 | opp_overlap 2300311, overlap 2300309 2300313 GGCTGTTGAAGGTAG GGGTGGAGA GGTC TCTCCACCG TATTACTTGTGTTTA TERM 2545 2300313 - 2300332 + T 83 -12.2 -2.60405 | opp_overlap 2300311, overlap 2300312 2300309 GCTGTTGAAGGTAGG GGTGGAGA GGTC TCTCCACC GTATTACTTGTGTTT Sde_1807 2300632 - 2300336 - | hypothetical protein Sde_1808 2301249 - 2300671 - | hypothetical protein TERM 2546 2301545 - 2301560 + G 76 -4.6 -5.00616 | opp_overlap 2301534, overlap 2301546 AAGAGCGTATTTTGC GCGTGG TGCC CCACGG TTTTTTAACAACCGA TERM 2547 2301598 - 2301580 - g 73 -4.4 -4.8143 | TTAACAACCGAAAAA CCCCTCAC GCA GTGGCGGG CACTTTCTGAACAAA TERM 2548 2302098 - 2302087 - g 72 -5.8 -4.55128 | ATCTCTAAATTAAAA GCCT CTTT AGGC GAAGGTTACACCACC TERM 2549 2302201 - 2302211 + G 77 -6.8 -4.46656 | TTAAGCATAATTATC GCAG TAG CTGC TTTTAATATTGTGAC Sde_1809 2301364 - 2302608 + | lipoprotein releasing system transmembrane protein LolE TERM 2550 2302854 - 2302842 - g 72 -9.1 -3.48276 | GGGCGGTTTAGATAA GCCAG ACG CTGGC GAAGTGTGGGTAAAT Sde_1810 2302663 - 2303349 + | putative ATP-binding component of ABC transporter TERM 2551 2304508 - 2304522 + G 78 -5 -5.01732 | CGCTGTTGGCATTAC CGCATT TGT AATGTG TTTTTTAGCAACCTT Sde_1811 2303357 - 2304595 + | addiction module toxin, Txe/YoeB Sde_1812 2304665 - 2305153 + | prevent-host-death protein TERM 2552 2305805 - 2305817 + F 74 -4.1 -4.91573 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCTGTTTT Sde_1813 2306670 - 2307008 + | hypothetical protein Sde_1814 2307079 - 2307468 + | hypothetical protein TERM 2553 2307714 - 2307693 - f 78 -7.3 -4.42653 | ATTTCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 2554 2307753 - 2307792 + F 70 -9.6 -2.80492 | overlap 2307751 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_1815 2308127 - 2308567 + | hypothetical protein Sde_1816 2309664 - 2309954 + | hypothetical protein Sde_1817 2310113 - 2310910 + | hypothetical protein Sde_1818 2310958 - 2311347 + | hypothetical protein Sde_1819 2311499 - 2311927 + | methyltransferase, putative Sde_1820 2312734 - 2313597 + | methyltransferase TERM 2555 2313653 - 2313602 - f 79 -8.3 -4.19974 | gap 3, opp_overlap 2313612, overlap 2313606 AAAAGGTGTAACAAA GCAAGCAAGCGGGACAATTGTTACGC TGC GCTTCACAATTG-CCC-CTT-CTTGC GGCGTTATGTTTTTC TERM 2556 2313653 - 2313606 - f 90 -11.4 -3.68738 | gap 1, opp_overlap 2313612, overlap 2313602 GGTGTAACAAAGCAA GCAAG-CGGGACAATTGTTACGC TGC GCTTCACAATTGCCCCTTCTTGC GGCGTTATGTTTTTC TERM 2557 2313612 - 2313646 + F 80 -10 -3.63837 | opp_overlap 2313602 2313606 ACAAAGCAAGCAAGC GGGACAATTGTTACGC TGC GCTTCACAATTGCCCC TTCTTGCGGCGTTAT Sde_1821 2313679 - 2314593 + | response regulator receiver domain-containing protein TERM 2558 2314609 - 2314621 + G 77 -3.4 -5.15634 | AAAACATAACAAGTT TGTC AACAG GACA TTTTTTGCTACGCTC TERM 2559 2314646 - 2314658 + G 72 -9.1 -3.53224 | ACGCTCCGTTTTGCG GTGGC TTC GCCAC TTTACCGCAAAACTC Sde_1822 2314580 - 2315377 + | histidine kinase TERM 2560 2315674 - 2315713 + F 70 -9.6 -2.80492 | overlap 2315672 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_1823 2316032 - 2316409 + | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) Sde_1824 2317519 - 2318040 + | hypothetical protein TERM 2561 2318141 - 2318114 - f 70 -2.6 -4.9792 | gap 1, overlap 2318115 CATTTTACACAAAAA CGCTCTCC-GCAA TAT TCGCAGGTGAGCT TGGCGTTATGAGCTA TERM 2562 2318287 - 2318266 - f 73 -7.3 -4.11394 | ATTCCATTTGTAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 2563 2318326 - 2318365 + F 70 -9.6 -2.80492 | overlap 2318324 TGGCGGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC Sde_1825 2318716 - 2318982 + | hypothetical protein Sde_1826 2319153 - 2319623 + | hypothetical protein TERM 2564 2319633 - 2319619 - f 77 -6.4 -4.58663 | AGTACGGGGCAAAAA GCTAAC AAG GCTAGC CAACATCGCCCTTGC TERM 2565 2319658 - 2319670 + F 71 -4.7 -4.64952 | overlap 2319648 2319652 CCTTGCGGGCTGGAC CTCCG TTC CGGTG TTTGTTTATGTGCTT TERM 2566 2319808 - 2319820 + F 74 -4.1 -4.91573 | GGTTAATTTGTATGC GCTAT GGA ATGGC TTTTTCCTCTGTTTT Sde_1827 2320208 - 2320606 + | heat shock protein DnaJ-like Sde_1828 2321161 - 2321538 + | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) TERM 2567 2321807 - 2321786 - f 78 -7.3 -4.42653 | ATTCCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 2568 2321846 - 2321885 + F 70 -9.6 -2.80492 | overlap 2321844 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC TERM 2569 2322812 - 2322791 - f 78 -7.3 -4.42653 | ATTTCATTTAGAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG TERM 2570 2322851 - 2322890 + F 70 -9.6 -2.85437 | opp_overlap 2322864, overlap 2322849 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAATAC ACAAATTAGTTAAACC TCGTTGGTGTTAGTC TERM 2571 2323961 - 2323945 - g 100 -3.7 -5.88471 | TATTATCAAAAAAAA CGAGA CTTTGGT TCTCG CATCTGACTATCTAT TERM 2572 2324141 - 2324104 - g 72 -8.6 -3.82481 | gap 2, opp_overlap 2324101 2324113, overlap 2324105 ATCAAAAGCTAACAA GTCAATGCAGCCGACCGC TAAC GCG-TCGGCTG-ATTGAG GCGTTATGAGCTACC TERM 2573 2324140 - 2324105 - g 77 -12.1 -2.88404 | gap 2, opp_overlap 2324101 2324113, overlap 2324104 TCAAAAGCTAACAAG TCAATGCAGCCGACCGC TAAC GCG-TCGGCTG-ATTGA GGCGTTATGAGCTAC Sde_1829 2323220 - 2324140 + | methionine sulfoxide reductase A TERM 2574 2324285 - 2324264 - f 73 -7.3 -4.11394 | ATTCCATTTGTAAAA GTAATAGGC TAAA GCCAATTAC AACGTGCTTTCGTAG Sde_1830 2324600 - 2324992 + | hypothetical protein TERM 2575 2325277 - 2325316 + F 70 -9.6 -2.80492 | overlap 2325275 TGGCAGTTTTAATCC GGTTTAACTAAATTGT AAAAACAC ACAAATTAGTTAAACC TCGTTGGTGCTAGTC TERM 2576 2325941 - 2325912 - g 80 -7.2 -4.63527 | TCAGGAGCTGAAAAA GATATACCCTGG TTTGGC CCAGGACATACC GCTATTTTTTGGTTC Sde_1831 2325627 - 2326211 + | hypothetical protein TERM 2577 2326292 - 2326235 - f 88 -10.7 -3.74488 | gap 1, opp_overlap 2326235 2326236 2326262 2326263 TAACAAAACAATCAA CCGGACTCCGCTAAGCGTGGT-TCGC TTTGCTC ACAATACCACGCTTAGCTAAGCTCGG TTATTGTGGCGTTAT Sde_1832 2326328 - 2326807 + | hypothetical protein Sde_1833 2328443 - 2327310 - | Heme exporter protein CcmA TERM 2578 2328016 - 2328040 + g 70 -2.1 -5.03314 | gap 1, opp_overlap 2328016 TAGGCGAGAGGGAAA TCGC-CGCCT CTCATA ATGCGTGCGA TTTTTTCCGAGTCAA TERM 2579 2328675 - 2328663 - H 70 -7.7 -3.67918 | opp_overlap 2328659 AAGTAATAGGCTAAA CGCAA TTT TTGCG AGTATTGGCTTAGCT TERM 2580 2329289 - 2329274 - g 91 -6.2 -5.46629 | AAGACTGCAAAAAAA TCGTAT ATGG ATACGA TGTGAAAGAACATTT Sde_1834 2329000 - 2329512 + | cytochrome c-type biogenesis protein CcmB Sde_1835 2331150 - 2330017 - | cytochrome c-type biogenesis protein CcmC TERM 2581 2330723 - 2330747 + g 70 -2.1 -5.03314 | gap 1, opp_overlap 2330723 TAGGCGAGAGGGAAA TCGC-CGCCT CTCATA ATGCGTGCGA TTTTTTCCGAGTCAA Sde_1836 2331249 - 2331650 + | hypothetical protein TERM 2582 2331657 - 2331669 + F 75 -3.4 -5.15634 | CGCAGCTAACAAGTT TGTC AACAG GACA TTTTTTGCTGCGCTC TERM 2583 2331694 - 2331706 + F 73 -9.1 -3.53224 | GCGCTCCGTTTTGCG GTGGC TTC GCCAC TTTACCGCAAAACTC Sde_1837 2331766 - 2332458 + | hypothetical protein TERM 2584 2332566 - 2332539 - T 86 -7 -4.9792 | gap 1, overlap 2332540 2332553 CATTTTACACAAAAA CGCTCTCC-GCAA TAT TTGCAGGTGAGCA AAGCGTTAGGCATCG TERM 2585 2332565 - 2332540 - T 73 -8.3 -3.58029 | gap 1, overlap 2332539 2332553 ATTTTACACAAAAAC GCTCTCC-GCAA TAT TTGCAGGTGAGC AAAGCGTTAGGCATC Sde_1838 2332913 - 2332599 - | ArsR family transcriptional regulator Sde_1839 2333355 - 2332918 - | periplasmic protein thiol:disulfide oxidoreductase DsbE TERM 2586 2333420 - 2333437 + H 78 -9.9 -3.57144 | opp_overlap 2333420 2333410 CAACACCTGTCAATA TGCAACC GTAT GGTTGCA TTTAGCCATGCCAAC TERM 2587 2333437 - 2333420 - H 73 -9.9 -3.04248 | opp_overlap 2333420, overlap 2333410 CAACACCTGTCAATA TGCAACC GTAT GGTTGCA TTTAGCCATGCCAAC TERM 2588 2334038 - 2334056 + G 70 -5.3 -4.43012 | ATTCAAAACTTGGAG TGCAGGA AGAGG TTCTGCA TTTTGATATTGAGGT Sde_1840 2333620 - 2334096 + | gentamicin 3'-N-acetyltransferase Sde_1841 2334243 - 2334857 + | hypothetical protein Sde_1842 2334990 - 2335355 + | polyhydroxyalkanoate depolymerase Sde_1843 2335377 - 2335592 + | hypothetical protein Sde_1844 2335977 - 2335717 - | hypothetical protein Sde_1845 2336225 - 2335974 - | hypothetical protein TERM 2589 2336296 - 2336278 - H 78 -8.8 -3.79678 | AAGGGCCCATAACAA GGGTGTCA ACC TGACGCCC AAAGGTACGCTGGTT TERM 2590 2336320 - 2336332 + H 93 -9.1 -4.57569 | GCTGGTTTTGTCGTA TGGCC TAT GGCCA TTTTTGCACAAATCC TERM 2591 2336680 - 2336694 + G 81 -8.6 -4.42386 | GTCCGATGCGGATGA TCTTCC TGA GGAAGA TTTTATCGATGACCA Sde_1846 2336591 - 2337379 + | chromosome segregation protein SMC Sde_1847 2337453 - 2337950 + | cell division protein ZipA Sde_1848 2338755 - 2338168 - | NAD-dependent DNA ligase TERM 2592 2338968 - 2339000 + r 71 -2 -5.08169 | gap 1, overlap 2338973 TATGGCTTAACGGTG GCAGGCCGTCGAC ATCTAGGC GTCGACGG-TTGA TTTTTTGGAATCTAT TERM 2593 2338973 - 2338996 + r 83 -9.6 -3.93769 | overlap 2338968 CTTAACGGTGGCAGG CCGTCGAC ATCTAGGC GTCGACGG TTGATTTTTTGGAAT Sde_1849 2340347 - 2338983 - | acyltransferases-like TERM 2594 2339957 - 2339941 - G 70 -5.2 -4.48877 | opp_overlap 2339941, overlap 2339956 TAAATACGTAGAAAA CGTTTT AGGTA AAAACG CTTTAAGCATATGTG TERM 2595 2340029 - 2340019 - G 79 -4.6 -5.26875 | CTGCCAATCAAAAAA GCGC TTA GCAC AAAGAATAAATCCAC Sde_1850 2340399 - 2341307 + | sensor protein GLPS Sde_1851 2341501 - 2342850 + | glutathione reductase Sde_1852 2343904 - 2342927 - | methyltransferase, putative Sde_1853 2344638 - 2343901 - | methyltransferase Sde_1854 2344836 - 2346485 + | response regulator receiver domain-containing protein Sde_1855 2346482 - 2347177 + | signal transduction histidine kinase Sde_1856 2347626 - 2347237 - | hypothetical protein TERM 2596 2347450 - 2347440 - G 85 -5.4 -5.40072 | CTGCCCCCAAAAAAA TCTG CTG CAGA AAATCGACTTCGAAG Sde_1857 2350645 - 2347694 - | putative metalloprotease Sde_1858 2350797 - 2351105 + | mannonate dehydratase Sde_1859 2351162 - 2351950 + | gluconate transporter TERM 2597 2351981 - 2351958 - T 72 -9.6 -3.18264 | GGCCTTAGGTATGAA TGCCCGCT GCTTATTG AGCGGGCA ATAGGGTGATGCGTT Sde_1860 2352729 - 2352022 - | aconitate hydratase 2 Sde_1861 2354315 - 2352798 - | Ppx/GppA phosphatase TERM 2598 2354106 - 2354141 + g 71 -3.4 -4.82901 | overlap 2354078 TGTTAAGCTTGCTAT GGCGCGCTC-TTTAGC CTCTGC GCTAAGTGAGC-CGTC TTTTTGTAAACCCCG Sde_1862 2354630 - 2355277 + | protein-methionine-S-oxide reductase TERM 2599 2355661 - 2355671 + G 72 -5.4 -4.40003 | GTATGTTATTTGCCC GCAA TTG TTGC TTTATGTTTATACGG Sde_1863 2355310 - 2355741 + | hypothetical protein Sde_1864 2356024 - 2355728 - | flagellar protein FhlB-like protein Sde_1865 2357649 - 2356021 - | diguanylate cyclase/phosphodiesterase TERM 2600 2356212 - 2356227 + g 73 -4 -4.7416 | gap 1 GTGTGCTCATTACTT GATCGCC AGA GGC-ATC TTTTTGCACTTTTAC TERM 2601 2356295 - 2356314 + g 79 -2.1 -5.61913 | TCCATAAACATGGTC CAATAGC TTTTGC GCTTTTG TTTTTTGTCTTTATT TERM 2602 2356902 - 2356918 + g 85 -7.3 -4.9792 | TTATTACATTGTTAA CCAGTTT TAT AAGCTGG TTTTTATCTGCAGTA Sde_1866 2357809 - 2358480 + | ATP binding protein of heme exporter A Sde_1867 2358470 - 2359189 + | UDP-2,3-diacylglucosamine hydrolase Sde_1868 2359237 - 2359977 + | heme exporter protein CcmC TERM 2603 2360053 - 2360067 + G 72 -5 -4.67697 | overlap 2360054 CCTTACGTGTGGATT TGTTAC TTT GTAACG TTTGTTGTTTTGGCG Sde_1869 2359984 - 2360184 + | glutaminyl-tRNA synthetase Sde_1870 2360306 - 2360779 + | cysteinyl-tRNA synthetase, class Ia TERM 2604 2361808 - 2361818 + G 79 -4.6 -5.1356 | overlap 2361796 GTTTTGCGCTGCTAT CGCG CGA TGCG TTTTTATTGCTAAAC TERM 2605 2362204 - 2362189 - g 74 -6.8 -4.21462 | opp_overlap 2362189 ATCTAGTACGTAAAA CCCGCA ATGC TGCGAG TGTGTGGATTGGAAT TERM 2606 2362693 - 2362683 - g 71 -6.8 -4.1523 | GCTATTACAGATAAA CGCT ACA AGCG CAAAAAAACTGTTGC Sde_1871 2360769 - 2362796 + | cytochrome C-type biogenesis protein CcmF Sde_1872 2362811 - 2363353 + | heat shock protein DnaJ-like Sde_1873 2363543 - 2364562 + | GGDEF Sde_1874 2364598 - 2365503 + | heat shock protein DnaJ-like TERM 2607 2365513 - 2365543 + F 95 -13.2 -2.98072 | overlap 2365508 GATTAGGTCTAGATT TGGCGCGCTCAGTG CAA CGCTTTGCGCGCCA TATAATTATGATGCA Sde_1875 2365617 - 2366909 + | hypothetical protein Sde_1876 2366984 - 2367490 + | cold shock protein TERM 2608 2367600 - 2367580 - f 100 -15.5 -5.94597 | opp_overlap 2367580 CAAGACGAAAAAAAA GCCCATACC AAC GGTATGGGC TTTTTTGTTTTCTAA TERM 2609 2367580 - 2367600 + F 100 -15.5 -5.86976 | opp_overlap 2367580 CAAGACGAAAAAAAA GCCCATACC AAC GGTATGGGC TTTTTTGTTTTCTAA TERM 2610 2368328 - 2368339 + G 74 -5.8 -4.64846 | AGCCTATATGGTGAA TCGC TATG GCGA TTTTGTGCTTTATAA Sde_1877 2368062 - 2368505 + | cytochrome C-type biogenesis protein CcmH Sde_1878 2368565 - 2369821 + | cytochrome c biogenesis factor-like TERM 2611 2371338 - 2371326 - g 76 -4.7 -4.75309 | GCAAATTGAAGAAAA GGCGG AAG CTGCC CAACAGGTAGCCGAG Sde_1879 2369962 - 2373468 + | condensin subunit Smc Sde_1880 2373493 - 2374629 + | cell division protein ZipA TERM 2612 2376109 - 2376088 - g 72 -6.6 -4.36914 | opp_overlap 2376088, overlap 2376090 GCTTGGGCGATAAAA TCGTCGAC CAGCTT GTCGACAA TAAATTAGTTAATGA TERM 2613 2376624 - 2376613 - g 74 -5.8 -4.59773 | GTGTATCGGCAAAAA CCAC TTGT GTGG TGGCAGGCCCTGGGG Sde_1881 2374707 - 2376731 + | DNA ligase (NAD+) Sde_1882 2376731 - 2377345 + | transcriptional regulatory protein TERM 2614 2377561 - 2377543 - g 77 -8.9 -3.88015 | CAGATAACTACCAAA CCGAAGT TGTTC ACTTCGG CGCATCGTACAAAGC Sde_1883 2377359 - 2377781 + | hypothetical protein Sde_1884 2378054 - 2379088 + | AraC family transcriptional regulator TERM 2615 2379103 - 2379092 - f 78 -4.4 -5.0916 | CGCGCAAGATAAAAA GCAA TAAA TTGC GCCAATCTGTTAGGG TERM 2616 2380310 - 2380286 - g 76 -5 -4.74103 | gap 1, opp_overlap 2380286 TTGCTAACGCAAAAA GCGTT-TGCCG AAGG CGGCAGAATGC TTATCTATTTCTTGG TERM 2617 2380404 - 2380420 + G 72 -5.1 -4.56597 | overlap 2380400 TGTTGGCATTACTTA CGCCT ATAGCGA AGGCG TTTTTAACAGAAACG Sde_1885 2379224 - 2381011 + | putative acyl-CoA dehydrogenase TERM 2618 2381041 - 2381015 - f 77 -6.5 -4.62302 | opp_overlap 2381019, overlap 2381019 GAAGAGTTCTAAAAA GCAACCCCCAG TAAAG CTGGGGGTTTT TGTTCTAGTATTTCA TERM 2619 2381019 - 2381037 + F 100 -12.4 -5.2291 | opp_overlap 2381019 2381015 AGTTCTAAAAAGCAA CCCCCAGT AAA GCTGGGGG TTTTTGTTCTAGTAT TERM 2620 2381037 - 2381019 - f 95 -11.7 -3.81256 | opp_overlap 2381019, overlap 2381015 AGTTCTAAAAAGCAA CCCCCAG TAAAG CTGGGGG TTTTTGTTCTAGTAT TERM 2621 2381519 - 2381502 - g 70 -9.9 -3.01712 | opp_overlap 2381501 2381500 2381502 TTGTGCTTTCTAATA TTGCTGC CAAT GCAGCAA GTATTATTAAAAACA Sde_1886 2381162 - 2382763 + | pseudouridine synthase, Rsu TERM 2622 2382781 - 2382799 + T 91 -10.3 -4.13995 | opp_overlap 2382783 GTATTTAATCTATAG GAGGCAG TTTTT CTGCCTC TTTCATTTCTGCCCC Sde_1887 2383414 - 2382770 - | hypothetical protein TERM 2623 2383386 - 2383396 + g 71 -6.8 -4.0825 | opp_overlap 2383383 TTTATTACTAAGCGC GCGT TTA ACGC TTGTTTGGTTAGAGC Sde_1888 2383619 - 2384761 + | hypothetical protein Sde_1889 2384794 - 2385660 + | putative transmembrane protein Sde_1890 2385833 - 2386108 + | histidine kinase Sde_1891 2387524 - 2386337 - | mannonate dehydratase Sde_1892 2388895 - 2387582 - | high-affinity H+/gluconate symporter TERM 2624 2388566 - 2388546 - G 78 -6.2 -4.55625 | gap 1, overlap 2388562 ACTAACAGTACAAAA CCCAC-GTT GTAA AACAGTGGG ATACCGACAATAAAG TERM 2625 2389052 - 2389036 - R 100 -10.8 -5.24129 | opp_overlap 2389036 GGCGTGCATAAAAAA CCCCGC GAGAA GCGGGG TTTAGGGGGTAAGCT TERM 2626 2389036 - 2389052 + r 83 -10.8 -3.55563 | opp_overlap 2389036 GGCGTGCATAAAAAA CCCCGC GAGAA GCGGGG TTTAGGGGGTAAGCT Sde_1893 2391704 - 2389080 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2627 2389970 - 2389994 + g 81 -3.6 -5.37043 | gap 1 CAATTTCAAGAATGC GGCCAG-AGAA AATA TTCTTCTTGCC TTTTTTCTCTACGGT TERM 2628 2391288 - 2391299 + g 80 -5.8 -5.07486 | TTGTGCGTTTGCGTT GCCA GCTT TGGC TTTTTCTTCCACATC TERM 2629 2391582 - 2391597 + g 80 -6.8 -4.57837 | overlap 2391584 TACCAAAGTTTCTTC TTCGCC AGCG GGCGGA TTTTTAAGAAGCTCT TERM 2630 2392466 - 2392446 - g 72 -8.9 -3.58726 | overlap 2392464 GTTCGCTATAGATAA CCCCGCACT ACT AGAGCAGGG GCTAAAGCACCAACA Sde_1894 2392213 - 2392689 + | hypothetical protein Sde_1895 2392693 - 2393325 + | tRNA--hydroxylase TERM 2631 2393325 - 2393343 + T 78 -8.8 -3.78953 | AAATGTTACCCCATA GGCGCC TAGCAAC GGCGCC TTTCCTCCTACCAAT Sde_1896 2395414 - 2393351 - | Outer membrane receptor proteins mostly Fe transport-like TERM 2632 2395550 - 2395587 + r 73 -8.3 -3.59315 | opp_overlap 2395550 2395552, overlap 2395554 GGCTTGCGAACTTAA GATGTTAACGGGGCAGC GCAG GCAGCCCCGTAAGTAGC TTTAAAACTACTTGG TERM 2633 2395554 - 2395583 + r 71 -9.9 -2.64803 | opp_overlap 2395552 2395550, overlap 2395550 TGCGAACTTAAGATG TTAACGGGGCAGC GCAG GCAGCCCCGTAAG TAGCTTTAAAACTAC Sde_1897 2397052 - 2395595 - | secretion protein HlyD Sde_1898 2399857 - 2397116 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 2634 2398572 - 2398583 + g 76 -4.4 -5.0538 | overlap 2398568 AACTTTTGGATTTTG CTCT TTGC AGAG TTTTTTACACTAGAC TERM 2635 2398781 - 2398819 + g 74 -10.3 -3.26471 | gap 1, overlap 2398782 AAAGCGCTCTTCGCT TTCTTGCAGCGCG-AGCT GGGT AGCTTCGCGCTGCCAGCG TTCATATACAAGTGA TERM 2636 2398782 - 2398818 + g 76 -11.6 -2.55668 | gap 1, overlap 2398781 AAGCGCTCTTCGCTT TCTTGCAGCGCG-AGCT GGGT AGCTTCGCGCTGCCAGC GTTCATATACAAGTG TERM 2637 2398961 - 2398978 + g 77 -3.3 -5.26155 | opp_overlap 2398961, overlap 2398961 2398954 GGGAGCATGAATAAA GGCGCCA ACCG TGCCGTC TTTTTCTATTTCTAT TERM 2638 2399447 - 2399459 + g 81 -3.3 -5.28176 | TTGGCTAAATTCAAA CGTGG TTT TCGCG TTTTTTGTGCGTGAC Sde_1899 2401054 - 2399867 - | hypothetical protein TERM 2639 2400179 - 2400165 - G 76 -7.8 -4.36914 | overlap 2400166 TTGGCTTTCATAAAA CGGGCA TAC TGCCCA GTGGGGACATTGCCG TERM 2640 2401115 - 2401088 - R 100 -13.6 -3.60098 | gap 1 AGGGGGGAGGGGAAA TATGGCGCGCAGT TTA ACTG-GCGCCATA GGAACACAATGTTGA Sde_1900 2401859 - 2401134 - | UDP-2,3-diacylglucosamine hydrolase Sde_1901 2402353 - 2401862 - | MerR family transcriptional regulator TERM 2641 2403571 - 2403559 - g 88 -7.7 -4.99035 | opp_overlap 2403566 CGATTTAGATAAAAA TGCAC CCC GTGCA ATGTGCGTGCTTAAC TERM 2642 2404083 - 2404071 - g 81 -3.3 -5.31456 | GTAAGTTAGAAAAAA GCCTT GCT ATGGC AACCGCAGGTCAAGG Sde_1902 2402435 - 2404207 + | glutaminyl-tRNA synthetase TERM 2643 2405480 - 2405466 - g 75 -10 -3.53761 | GAAGCGTGGTTTAAA GCCACT ACT AGTGGC AGCAGTGAGCTTTCG cysS 2404266 - 2405645 + | cysteinyl-tRNA synthetase TERM 2644 2405680 - 2405698 + F 100 -8.9 -4.90906 | opp_overlap 2405678 TAATGTTTTAACAGG GGCGATT ATTAC AATCGCC TTTTTAATGTTGTGG TERM 2645 2405783 - 2405768 - f 86 -7.6 -4.68593 | GTGATGATGGAAAAA CCCAAT GGTG ATTGGG TAGACCCAGAGTTCG Sde_1904 2405844 - 2406668 + | Kef-type K+ transport system, NAD-binding component TERM 2646 2406792 - 2406833 + G 72 -9 -3.5394 | gap 1, opp_overlap 2406818 2406819, overlap 2406832 ACTTTGGTAAACAGC CAGTGTGATATTCG-GT GGAATGCAA ACGCGAATATCGCACTG TTTCAGAAGCACTTT Sde_1905 2406705 - 2407262 + | hypothetical protein Sde_1906 2409057 - 2407246 - | response regulator receiver domain-containing protein djlA 2409357 - 2410172 + | DNA-J like membrane chaperone protein TERM 2647 2410458 - 2410442 - g 76 -8.7 -4.04206 | opp_overlap 2410442 GCACTTGCAGAGAAA GCAGCTT ACG AAGCCGC TTGGCTTGCTGCGTG Sde_1908 2410175 - 2411140 + | hypothetical protein TERM 2648 2411255 - 2411236 - T 100 -12.2 -4.50627 | opp_overlap 2411236 GAGCTATTAAAGAAA CGAGCTAG CGAG CTAGCTCG TTTTGTTGAATGCTT TERM 2649 2411236 - 2411255 + T 100 -12.2 -4.69656 | opp_overlap 2411236 GAGCTATTAAAGAAA CGAGCTAG CGAG CTAGCTCG TTTTGTTGAATGCTT Sde_1909 2411495 - 2411286 - | cold-shock DNA-binding protein family protein Sde_1910 2412382 - 2411831 - | hypothetical protein TERM 2650 2412159 - 2412125 - G 70 -9.3 -3.33696 | gap 1 CTGCTCGTCAATTAA GCGTTGTAGTAGGCGG AAGT CCGC-TACTCCACCGC GAAAGGACCGTGCAT Sde_1911 2413917 - 2412382 - | glutamate synthase, putative Sde_1912 2414056 - 2414379 + | hypothetical protein TERM 2651 2414771 - 2414756 - g 82 -5.4 -5.19328 | ACCGCAGAACAAAAA GGCTTG GATT CAAACC TGCAAGCACTACTTC Sde_1913 2414402 - 2415193 + | hypothetical protein TERM 2652 2415228 - 2415247 + F 83 -9.3 -4.03586 | opp_overlap 2415230 GATTAACACCTATAT GAGCCTC CCTCGA GAGGCTC TTGTTGTATTTGAAA Sde_1914 2415304 - 2415933 + | copper-resistance protein CopA TERM 2653 2417154 - 2417166 + G 75 -2.7 -5.15969 | TGCGTATCTATTCAA TTTTG ACA CAGAA TTTTTTAACTTGGCC Sde_1915 2415934 - 2417652 + | response regulator receiver domain-containing protein Sde_1916 2417656 - 2418531 + | periplasmic sensor signal transduction histidine kinase Sde_1917 2418575 - 2418823 + | MerR family transcriptional regulator TERM 2654 2418860 - 2418839 - T 95 -12.3 -3.38316 | opp_overlap 2418837, overlap 2418835 TGACTAGCCAACTAA GCGGTACCC GTTA GGATACCGC AATACTTCAATGGGC Sde_1918 2419952 - 2418867 - | 16S rRNA m(2)G 1207 methyltransferase Sde_1919 2420680 - 2419952 - | ribosomal small subunit pseudouridine synthase A TERM 2655 2420157 - 2420173 + g 82 -7.9 -4.59773 | opp_overlap 2420146 2420157 ATAAGCTCCACAGTA GCGGGCA GGG TGGCCGC TTTTTCGCCATGAAG Sde_1920 2421640 - 2420798 - | methenyltetrahydrofolate cyclohydrolase TERM 2656 2422448 - 2422431 - g 72 -5.5 -4.38313 | overlap 2422433 ACATTAAAGGCAAAA TGGGGCA AACT TGCCCAA AATCTAATTGTTTTT Sde_1921 2422281 - 2423108 + | cation efflux protein TERM 2657 2423665 - 2423641 - g 71 -7.1 -4.1822 | CTGTATTTCAATAAA TCTCTCACGCC CAA GGCGCCAGAAA ATTGGGAGGCTTTGC Sde_1922 2423218 - 2424063 + | heavy metal efflux pump CzcA TERM 2658 2425555 - 2425512 - g 76 -4 -5.05116 | gap 1, opp_overlap 2425518, overlap 2425516 2425517 GTATAAATAATAAAA CAGAGCGCTTAC-AAAAGCTG ATT CAACTTTTTGTAAGCAACATG CCAGCTAATATTGAT Sde_1923 2424122 - 2425831 + | response regulator receiver domain-containing protein Sde_1924 2426494 - 2425862 - | TetR family transcriptional regulator TERM 2659 2426564 - 2426589 + r 72 -7.1 -3.96224 | gap 1, opp_overlap 2426571 TGGTTTACTTTTGCT TGATAAACTACA CCG TGTAGTTTA-CA TTTGTGCCTGCTTTA Sde_1925 2428373 - 2426940 - | GGDEF family protein TERM 2660 2429197 - 2429222 + G 79 -10.5 -3.61517 | opp_overlap 2429201 GCCAAGCGGTGGGAG CAGATCCACAC GAGG GTTTGGATCTG TTATTGCAACAAAGT Sde_1926 2429001 - 2429249 + | XRE family transcriptional regulator Sde_1927 2429330 - 2429815 + | hypothetical protein Sde_1928 2429928 - 2430413 + | MerR family transcriptional regulator Sde_1929 2430413 - 2431756 + | outer membrane efflux protein TERM 2661 2431984 - 2431972 - g 79 -9.1 -4.18161 | opp_overlap 2431972 2431969 GATAAACCTGGAAAA TCCCC GAT GGGGA TGGATTTGATTCCTG Sde_1930 2431780 - 2433669 + | membrane-fusion protein-like TERM 2662 2433697 - 2433711 + G 76 -5 -4.8083 | overlap 2433698 TCTATTATTCGCTGG TCGATT GGT AATCGG TTTTTAGTGCTGTTG TERM 2663 2434481 - 2434455 - g 79 -10.3 -3.63922 | gap 1, overlap 2434453 ATTGCTGCTAAAAGA TGTGG-CCGATA TCGG TATCGGTCCACA AATGCGACGTGGTAT TERM 2664 2434973 - 2434953 - g 74 -3.9 -4.96388 | overlap 2434943 AATCACCAAAGAAAA TCGCTGGCA AAT TGTCACCGA ATCCGCTGTTGAAGT Sde_1931 2433673 - 2436792 + | Co/Zn/Cd efflux system membrane component TERM 2665 2437874 - 2437889 + G 74 -5.4 -4.62904 | overlap 2437888 CACTCTGGTGTATAC CATCGT AGTG GCGATG TTTTTAACAATATTT Sde_1932 2436870 - 2438183 + | amino acid transporter TERM 2666 2438554 - 2438565 + G 91 -2.2 -5.86965 | GTTCATGATGCTCAC GTGG TCCG CTAC TTTTTTTTACTCCCT Sde_1933 2438309 - 2438617 + | hypothetical protein TERM 2667 2438665 - 2438703 + F 89 -12.7 -2.89742 | gap 1, opp_overlap 2438677, overlap 2438666 2438669 2438677 CATCGAATGATGAGT GA-GGTGCCAACATTACA AGCT TGTAATGTTGGCGTCATC TCTATGACAGTTACC TERM 2668 2438666 - 2438701 + F 86 -12 -2.99947 | opp_overlap 2438677, overlap 2438665 2438669 2438677 ATCGAATGATGAGTG AGGTGCCAACATTACA AGCT TGTAATGTTGGCGTCA TCTCTATGACAGTTA TERM 2669 2438669 - 2438698 + F 100 -14.5 -2.72799 | opp_overlap 2438677, overlap 2438666 2438665 2438677 GAATGATGAGTGAGG TGCCAACATTACA AGCT TGTAATGTTGGCG TCATCTCTATGACAG Sde_1934 2438926 - 2439354 + | MerR family transcriptional regulator TERM 2670 2439554 - 2439532 - g 78 -12 -3.08679 | overlap 2439537 2439548 CCTGGTTATTGAAGA GCAAAGCCCC GAA GGAGCTCTGC CAGTAAAAACAACGG Sde_1935 2439347 - 2441815 + | copper-translocating P-type ATPase TERM 2671 2441960 - 2441976 + G 71 -3.7 -4.75174 | overlap 2441942 2441961 TGCTGATGGAGCATC GTCAACA TGT TGTTGAG TTTTTGCCTTACCTG Sde_1936 2441863 - 2442150 + | hypothetical protein TERM 2672 2442480 - 2442494 + G 80 -7.2 -4.7219 | TATTTTGAGTAATGT CCTAAT CGT ATTAGG TTTTATATTGCTGTC Sde_1937 2442163 - 2442810 + | hypothetical protein Sde_1938 2442821 - 2443261 + | hypothetical protein Sde_1939 2443313 - 2443771 + | ATPase Sde_1940 2443779 - 2444147 + | hypothetical protein Sde_1941 2444204 - 2444659 + | hypothetical protein Sde_1942 2445203 - 2444691 - | hypothetical protein Sde_1943 2445955 - 2445251 - | hypothetical protein Sde_1944 2446754 - 2446179 - | cytochrome c family protein TERM 2673 2446705 - 2446683 - G 100 -17.8 -4.67607 | opp_overlap 2446685 CCCCGAATAAATAAA CAGCCCTCCT GCA AGGAGGGCTG TAATCACAATGAGCA TERM 2674 2446685 - 2446703 + g 87 -14.6 -2.79183 | opp_overlap 2446683 CCGAATAAATAAACA GCCCTCCT GCA AGGAGGGC TGTAATCACAATGAG Sde_1945 2447058 - 2446768 - | hypothetical protein Sde_1946 2447973 - 2447110 - | putative copper resistance protein B Sde_1947 2449853 - 2447970 - | putative copper resistance transmembrane protein TERM 2675 2449833 - 2449807 - G 78 -6.4 -4.63486 | overlap 2449809 AGGCCTTGAACAAAA CGCCGACGACTC AAG GAGCCGACGAGG GGGCTAAATGGGCGA Sde_1948 2450044 - 2450724 + | response regulator receiver domain-containing protein Sde_1949 2450726 - 2452138 + | putative 2-component sensor protein Sde_1950 2452242 - 2452691 + | MerR family transcriptional regulator TERM 2676 2452728 - 2452705 - T 77 -11 -2.76009 | opp_overlap 2452708, overlap 2452704 2452708 GAAAAGCGTGTAAAG TCAGGGTTGC CCAG GCAACCCTGT ATGACGTATCAAATA TERM 2677 2452708 - 2452725 + T 83 -11.3 -2.90763 | opp_overlap 2452708 2452705 2452704 AAGCGTGTAAAGTCA GGGTTGC CCAG GCAACCC TGTATGACGTATCAA TERM 2678 2452725 - 2452708 - T 80 -11.3 -2.64651 | opp_overlap 2452708, overlap 2452705 2452704 AAGCGTGTAAAGTCA GGGTTGC CCAG GCAACCC TGTATGACGTATCAA TERM 2679 2452756 - 2452770 + T 100 -10 -5.00765 | ATACTGCAATGTCCA CAGCAG CTG CTGCTG TTTTTATCGTTACTT Sde_1951 2452982 - 2452737 - | transglutaminase-like TERM 2680 2454801 - 2454787 - g 78 -5 -5.05113 | opp_overlap 2454787 GCGAGACAAATAAAA CCCAAT ACG ATTGAG CTTTGTGGTCTTGTG Sde_1952 2453188 - 2455362 + | putative cation-transporting ATPase membrane protein Sde_1953 2457513 - 2455600 - | high-affinity Fe2+/Pb2+ permease Sde_1954 2458511 - 2457630 - | Crp/FNR family transcriptional regulator TERM 2681 2457805 - 2457775 - G 73 -10.4 -3.05844 | opp_overlap 2457758 GCTTCCAGTTCAATA TGGACAGTGAGCAC GTG GTGTTCTCCGTCCA GCGACCATAAATGCA TERM 2682 2457853 - 2457868 + g 73 -4 -4.83169 | AATTCCTGAACATCT TTGAGT TTTC GCTCAA TTTTTCTCGCAAGAT TERM 2683 2458573 - 2458550 - R 89 -12.4 -2.87463 | overlap 2458537 AAGTTGTTTGATAGA TGGCCCCAGC AAAC ACCGGGGCCA ATCGTCACGGCATTA Sde_1955 2461717 - 2458586 - | cation efflux system protein TERM 2684 2459158 - 2459170 + g 74 -5.5 -4.58663 | overlap 2459155 CCAGCCAATAACCGG GTGGA ATA TCCGC TTTTTCACGAATACT Sde_1956 2462806 - 2461730 - | hypothetical protein Sde_1957 2463066 - 2462806 - | hypothetical protein Sde_1958 2464385 - 2463117 - | aconitate hydratase 1 TERM 2685 2464253 - 2464268 + g 84 -4.7 -5.44119 | GAGGGTTGTGCGTCA GCGTT AGTGCC AACGC TTTTTTTAACGTCAG Sde_1959 2464824 - 2464459 - | hypothetical protein TERM 2686 2464734 - 2464716 - G 78 -6.6 -4.58395 | overlap 2464717 GGGATTCGTCAAAAA CCAGGTGC TCA GCGCCTGA CTGGTGCAACTGATG Sde_1960 2465779 - 2464868 - | Co/Zn/Cd efflux system component TERM 2687 2466203 - 2466184 - g 75 -10 -3.62046 | CGACCTCCGGAACAA CTGCTCGG AAAA CCGAACAG TGGAGGATTGCGGCA Sde_1961 2465852 - 2466256 + | MerR family transcriptional regulator Sde_1962 2467245 - 2466265 - | AP endonuclease Sde_1963 2467471 - 2468517 + | chromosome segregation ATPases-like TERM 2688 2468652 - 2468634 - g 70 -5.2 -4.40601 | overlap 2468635 AATGGACAGAACAAA CCTGGAAC CCA GTCACAGG CTGCACCAAGGTGTC Sde_1964 2468597 - 2469340 + | hypothetical protein Sde_1965 2469368 - 2470639 + | hypothetical protein TERM 2689 2471138 - 2471150 + G 84 -4.7 -5.43553 | TTTTTAAAAGATTGG GGCTG TGA CTGCC TTTTCTTTTTTAACT Sde_1966 2470652 - 2471758 + | hypothetical protein Sde_1967 2471813 - 2474356 + | hypothetical protein TERM 2690 2475639 - 2475604 - g 73 -10.5 -3.04144 | opp_overlap 2475618, overlap 2475607 CGCTGAGGGTGAAGA CAATGCGCGCAAGCT GCGAGA AGCTTCCTCGCATTG GTTGAGGCACACCGG Sde_1968 2474555 - 2475802 + | phage integrase family site specific recombinase TERM 2691 2476216 - 2476232 + F 77 -3.7 -5.1101 | opp_overlap 2476226 CAGACACACAGATAT TGCAC AGAAATG GTGCA TTTTTTGGATCATAC TERM 2692 2476319 - 2476299 - g 81 -4.7 -5.18726 | GTGCTAGAAGAAAAA CCGACAACA GAA TGTTACCAG ACGCTTTCGAGCGCG Sde_1969 2476284 - 2477132 + | zinc metalloproteinase Mpr protein TERM 2693 2480260 - 2480236 - g 84 -5.1 -5.29782 | overlap 2480223 TAGATTTACAAAAAA TCCTTGATC CAGACCT GATCAAAGA GTGATCGATCATCGC Sde_1970 2477202 - 2480264 + | TnpA family transposase TERM 2694 2480283 - 2480307 + T 85 -9.4 -4.10657 | gap 1, opp_overlap 2480288 2480290, overlap 2480285 ATCATCGCCGTTTTA C-AGGAGAGTG GCGA CACTCTCCTCG TTTTCCCAAATATAA TERM 2695 2480285 - 2480304 + T 86 -12.2 -3.08508 | opp_overlap 2480288 2480290, overlap 2480283 CATCGCCGTTTTACA GGAGAGTG GCGA CACTCTCC TCGTTTTCCCAAATA Sde_1971 2481824 - 2480580 - | putative ABC transport system permease protein Sde_1972 2482557 - 2481814 - | ABC transporter ATP-binding protein TERM 2696 2482484 - 2482496 + g 71 -7.7 -3.87815 | opp_overlap 2482484 2482483 TTATGGTACTTAAAC TGCAC AGT GTGCA TTTCTACAGCTAGGC TERM 2697 2482882 - 2482870 - H 74 -4.1 -4.95155 | CCTAGAGGACAAAAA TGCCT GAA AGACA AAAAGTGATTGGGCT TERM 2698 2483341 - 2483354 + G 74 -8.1 -3.86346 | opp_overlap 2483335 2483332 AAAAGACATCCGCTA CCAGC AGGC GCTGG TTTCTAAGCGGGTGC Sde_1973 2482973 - 2483671 + | hypothetical protein Sde_1974 2484208 - 2483741 - | phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1 Sde_1975 2485329 - 2484319 - | putative GTPase Sde_1976 2485953 - 2485381 - | hypothetical protein TERM 2699 2485997 - 2485979 - R 100 -12.4 -5.0916 | TTCCGAATACAAAAA GCGGAGAC GAG GCCTCCGC GCGAAAATATTGGAT Sde_1977 2487403 - 2486048 - | 5-methyltetrahydrofolate--homocysteine methyltransferase TERM 2700 2487133 - 2487121 - G 76 -7.7 -4.2828 | CTCGATCCACTAAAA TACCG TAA CGGTA CCCAGCCGATGCATA TERM 2701 2487292 - 2487306 + g 79 -2.8 -5.32565 | CGTGCTCATCTTCTT CACTTA TAA TGGGTG TTTTTTCATTAATTG Sde_1978 2489847 - 2487442 - | outer membrane protein Sde_1979 2490533 - 2489913 - | hypothetical protein TERM 2702 2490185 - 2490195 + g 74 -6.8 -4.2461 | CTACATGAAACCTTG GGCA CAT TGCC TTTGTTAATACGGCT Sde_1980 2491809 - 2490601 - | hypothetical protein Sde_1981 2492681 - 2492106 - | ABC transporter permease Sde_1982 2492942 - 2492757 - | hypothetical protein Sde_1983 2493975 - 2493181 - | transglutaminase-like domain-containing protein Sde_1984 2494850 - 2493975 - | transglutaminase-like TERM 2703 2494077 - 2494056 - G 74 -3.7 -5.00616 | CGGCGGGCCAAAAAA GGTACCA GATATAGG CGGTACC GCTTCTGGTCGCCTC TERM 2704 2495855 - 2495880 + G 79 -9.9 -3.75863 | gap 1, opp_overlap 2495855 2495858 2495859, overlap 2495858 CGGCCAACACGAAGA GAAT-GCTTGGA TGC TCCAAGCCATTC TTTCATAACACTTTT TERM 2705 2495880 - 2495855 - g 71 -9.9 -3.25073 | gap 1, opp_overlap 2495855 2495858, overlap 2495858 2495859 CGGCCAACACGAAGA GAAT-GCTTGGA TGC TCCAAGCCATTC TTTCATAACACTTTT TERM 2706 2495875 - 2495859 - g 74 -10.9 -2.84978 | opp_overlap 2495858 2495855, overlap 2495858 2495855 CAACACGAAGAGAAT GCTTGGA TGC TCCAAGC CATTCTTTCATAACA Sde_1985 2495382 - 2495888 + | ferritin DPS family DNA-binding protein TERM 2707 2495960 - 2495925 - f 71 -8.4 -3.50393 | gap 1, opp_overlap 2495935, overlap 2495889 2495929 2495935 TGTGAGCGCATATAA GTGAC-GAAAAGCCTCA CTA CGAGGCTTTTCTAACAC ACTACTTACGTATCC TERM 2708 2495955 - 2495929 - f 74 -10.2 -2.63257 | opp_overlap 2495935, overlap 2495925 2495935 AGCGCATATAAGTGA CGAAAAGCCTCA CTA CGAGGCTTTTCT AACACACTACTTACG TERM 2709 2495949 - 2495935 - f 79 -7.8 -4.32049 | opp_overlap 2495935, overlap 2495929 2495925 TATAAGTGACGAAAA GCCTCA CTA CGAGGC TTTTCTAACACACTA TERM 2710 2495935 - 2495949 + F 75 -7.1 -4.3739 | opp_overlap 2495935 2495929 2495925 TATAAGTGACGAAAA GCCTC ACTAC GAGGC TTTTCTAACACACTA Sde_1986 2496109 - 2496855 + | hypothetical protein TERM 2711 2496923 - 2496894 - f 70 -7.9 -3.72027 | gap 1 ATCCTGTATTAACAA TAGCCCTGCGAAAG ATG CCGT-GCAGGGCTA AAGGAGCTACGGCTA TERM 2712 2497370 - 2497389 + G 70 -2.1 -5.06414 | overlap 2497371 GACCAATTGACGCTC GCCGATA AGTGGA TATCGGA TTTTTCTTCAGGCAG Sde_1987 2496938 - 2497648 + | regulatory subunit of cAMP-dependent protein kinases-like Sde_1988 2500428 - 2497816 - | DNA polymerase 3, epsilon subunit TERM 2713 2498813 - 2498794 - G 77 -9.4 -3.99917 | AAAAAAGCCTACAAA TGCCAATA AAAT TATTGGCA GCCGCTGAAACCAAT TERM 2714 2499983 - 2499996 + g 80 -9.5 -3.85817 | TCTGCTATAAGCTCT CCGGG TTTA CCCGG TTTATGAACGAGCAT TERM 2715 2500117 - 2500102 - G 72 -10.4 -2.76162 | overlap 2500101 TACTTCATCGTAAAG CGGCGA CTTT TCGCCG GTAAAATCAAAATAC Sde_1989 2501868 - 2500480 - | aldehyde dehydrogenase family protein Sde_1990 2502373 - 2502161 - | hypothetical protein TERM 2716 2502398 - 2502411 + H 80 -3.8 -5.36364 | overlap 2502407 TCTGGCAGCGAATTG CAGG TTTTAC CCTG TTTTTCTATTTTTAA TERM 2717 2502580 - 2502552 - H 71 -4.5 -4.68384 | ATGTACCTAATAAAA TAGTTACGTAGGT TAT ACCCGCGCATCTA GCCGTACATTGATAA TERM 2718 2503977 - 2503990 + G 81 -3.8 -5.40072 | AGAATAGCCATAAGG GACG CAAAAT CGTC TTTTTTTAACGAACC TERM 2719 2504204 - 2504180 - g 74 -10.7 -3.19889 | opp_overlap 2504180 CACCAATACATCTAA CCCCGCTGTAA TGG TTGCAGCAGGG TTAATAGCGCAAAAG TERM 2720 2504180 - 2504204 + G 74 -10.7 -3.14132 | opp_overlap 2504180 CACCAATACATCTAA CCCCGCTGTAA TGG TTGCAGCAGGG TTAATAGCGCAAAAG TERM 2721 2504275 - 2504247 - g 75 -6.7 -4.5442 | opp_overlap 2504232 GGTTTAACGACAAAA CCTTGGGTAAAAA CTT CTTTTGCCCCAGG TTCACAGGTGGTACC Sde_1991 2502729 - 2505542 + | aconitase fumC 2505709 - 2507091 + | fumarate hydratase TERM 2722 2507378 - 2507413 + G 77 -8.9 -3.90574 | TTGGGGTCCTACGCA GCAGGCTCTACCCCC ATGGGC GGGGGTACGGTCGGC TTTCCTGTGCTTGTT TERM 2723 2508022 - 2508047 + G 76 -4 -5.08601 | gap 1, overlap 2508025 2508026 TGTACTGATAGTTGG GCTA-GTAGGC AGAAA GCCTACGTTGC TTTTTGTTGCGGTAC Sde_1993 2507216 - 2508319 + | hypothetical protein Sde_1994 2508503 - 2510614 + | C-terminal processing peptidase-1 TERM 2724 2510650 - 2510670 + G 78 -12.6 -2.57132 | opp_overlap 2510639 2510648 2510650, overlap 2510649 AACAGCATAAGAATA CGCCTCCA CCAGT TGGAGGCG GTTATCGCCAAACAC TERM 2725 2510670 - 2510650 - g 88 -12.6 -3.52482 | opp_overlap 2510650 2510649, overlap 2510639 2510648 AACAGCATAAGAATA CGCCTCCA CCAGT TGGAGGCG GTTATCGCCAAACAC Sde_1995 2510611 - 2511429 + | exonuclease III TERM 2726 2511450 - 2511492 + T 100 -15.1 -3.39449 | gap 1, opp_overlap 2511452 2511454 2511461, overlap 2511462 GCTAGCATACCCACA TACACCGCAAACCGTGCCGT TTAG ATGGCAC-GTTTGCGATGTA TTGCTATTAGTGCAG TERM 2727 2511490 - 2511452 - T 100 -13.3 -2.93858 | gap 1, opp_overlap 2511450 2511462, overlap 2511454 2511461 TAGCATACCCACATA CACCGCAAACCGTGCCGT TTAG ATGGCACG-TTTGCGATG TATTGCTATTAGTGC TERM 2728 2511488 - 2511454 - T 73 -10.1 -3.01912 | gap 1, opp_overlap 2511450 2511462, overlap 2511452 2511461 GCATACCCACATACA CCGCAAACCGTGCCGT TTAG ATGGCACG-TTTGCGA TGTATTGCTATTAGT TERM 2729 2511462 - 2511481 + T 80 -10 -3.66883 | opp_overlap 2511461 2511454 2511452, overlap 2511450 ACATACACCGCAAAC CGTGCCGT TTAG ATGGCACG TTTGCGATGTATTGC Sde_1996 2513649 - 2511499 - | hypothetical protein TERM 2730 2513132 - 2513113 - G 71 -3.6 -4.78107 | TATGAGCACCAAAAA GAACACCA ACAA TAATGTTC CGTACAAATAGCCAT TERM 2731 2513878 - 2513852 - R 100 -16.7 -6.07969 | opp_overlap 2513852 TAAAAGCAAAAAAAA GCGCCGCATTA GCCTT TAATGCGGCGC TTTTTGCCAATCATG TERM 2732 2513852 - 2513878 + r 100 -17.4 -4.60487 | opp_overlap 2513852 TAAAAGCAAAAAAAA GCGCCGCATTAG CCT TTAATGCGGCGC TTTTTGCCAATCATG Sde_1997 2514846 - 2513908 - | electron transfer flavoprotein, alpha subunit Sde_1998 2515597 - 2514848 - | ATPase TERM 2733 2516597 - 2516628 + G 76 -2.2 -5.28826 | gap 1, overlap 2516587 2516597 2516626 CATAGCGCGGGCTGG CCACTTTCTG-AGAG CGG CTCGGCAGGCGGTGG TTTTTTATACCATTT Sde_1999 2515895 - 2517532 + | S6 modification enzyme RimK Sde_2000 2518232 - 2517540 - | hypothetical protein TERM 2734 2519118 - 2519130 + G 72 -5.5 -4.55287 | opp_overlap 2519118 TCAGTAAACTTTAAA GCCGA CGA TTGGC TTTTGTGTGAATCAC Sde_2001 2518404 - 2519255 + | palmitoyl-CoA hydrolase Sde_2002 2519328 - 2519672 + | hypothetical protein TERM 2735 2519686 - 2519675 - T 78 -7.2 -4.42788 | TTTAATTGTATAAAA GGCC CGCT GGCC AACCTTATTCGAAAT TERM 2736 2519888 - 2519918 + T 100 -7.6 -5.52986 | gap 1, overlap 2519904 CTCCTAATGGTCCTG GCCCGACGCTCTC CCCCCC GAAA-CGTCGGGC TTTTTTTCGTCCAAT TERM 2737 2519904 - 2519917 + T 72 -8.1 -3.90707 | overlap 2519888 CCCGACGCTCTCCCC CCCGA AACG TCGGG CTTTTTTTCGTCCAA Sde_2003 2520680 - 2520006 - | tRNA (guanosine-2'-O-)-methyltransferase TERM 2738 2521118 - 2521107 - H 85 -5.8 -5.1356 | CGCCACCAATAAAAA GACG GAAC CGTC GAGAAATGTGTTTAG TERM 2739 2523265 - 2523253 - g 80 -6.3 -4.7373 | GGAGGCCACCAAAAA TAGTG CCG CACTA AAAACGAAACTAGAA Sde_2004 2521187 - 2523994 + | DNA helicase/exodeoxyribonuclease V, subunit B TERM 2740 2524746 - 2524727 - g 75 -6.4 -4.40132 | opp_overlap 2524726 ACCAAGTACAAGAAA GCCTGCAA ATAT TTGAAGGC CCTTTGCTAGAGCTA Sde_2005 2523991 - 2527458 + | DNA helicase/exodeoxyribonuclease V, subunit A TERM 2741 2527541 - 2527488 - T 78 -9 -3.86202 | gap 3, opp_overlap 2527494 2527497, overlap 2527483 2527489 TGCGATTAGAGCAAA CCTGCCCACGC-AGCTTAGCCGCTGCT GTT AATAGCGCCTA-GCTTGCG-GGGCAGA TACCAAGTGAAAACA TERM 2742 2527540 - 2527489 - T 76 -10.3 -2.914 | gap 3, opp_overlap 2527494 2527497, overlap 2527483 2527488 GCGATTAGAGCAAAC CTGCCCACGC-AGCTTAGCCGCTGCT GTT AATAGCGCCTA-GCTTGCG-GGGCAG ATACCAAGTGAAAAC Sde_2006 2527744 - 2527502 - | hypothetical protein Sde_2007 2527773 - 2528834 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2743 2528906 - 2528872 - f 100 -10 -4.54205 | opp_overlap 2528872 AGCACATTAAATAAA GCCCGTAGCCCTTTGA AAT TTAAAGTGATACGGGC TTTTTTTTGTTGGGC TERM 2744 2528872 - 2528906 + F 100 -12.2 -6.09888 | opp_overlap 2528872 AGCACATTAAATAAA GCCCGTAGCCCTTTGA AAT TTAAAGTGATACGGGC TTTTTTTTGTTGGGC Sde_2008 2529193 - 2529633 + | hypothetical protein TERM 2745 2529632 - 2529658 + T 100 -12.4 -3.54183 | opp_overlap 2529638, overlap 2529638 TATTGAGTATTGAAT AAAAAAGGGCCT TTA AGGCCCTTTTTA CTTTTTGTAATCCAG TERM 2746 2529638 - 2529652 + T 100 -11.4 -5.2197 | opp_overlap 2529638, overlap 2529632 GTATTGAATAAAAAA GGGCCT TTA AGGCCC TTTTTACTTTTTGTA TERM 2747 2529652 - 2529638 - T 100 -11.4 -5.4833 | opp_overlap 2529638 2529632 GTATTGAATAAAAAA GGGCCT TTA AGGCCC TTTTTACTTTTTGTA Sde_2009 2530300 - 2529689 - | hypothetical protein TERM 2748 2531581 - 2531599 + G 79 -7.4 -4.41353 | opp_overlap 2531566 2531581 TCGAGCCCCAATGCA GGCTCG CAGGCCT CGAGCC TTTTAATATCTCTAA TERM 2749 2532963 - 2532975 + G 72 -9.1 -3.62597 | opp_overlap 2532961 AACTGCGACATGATT GGCCT ATC AGGCC TTATTACACCATCGC TERM 2750 2533332 - 2533342 + G 76 -8.2 -4.08216 | AATAAATTTACCCCG GCGG TAC CCGC TTTTACCGGAACTAA metH 2530548 - 2534249 + | B12-dependent methionine synthase TERM 2751 2534257 - 2534283 + F 93 -10.8 -4.12532 | overlap 2534255 ATATTTAAACCTTGT GGGGCTCCCC GGCTTTA GGCGAGCCCC TTTCTATATAAGCAA Sde_2011 2534472 - 2534765 + | hypothetical protein TERM 2752 2534907 - 2534893 - g 74 -5.6 -4.58395 | GGCAGCTTGTAAAAA CCACAC TAT GCGCGG CTGTAGGCGTACAAA Sde_2012 2534820 - 2535047 + | hypothetical protein TERM 2753 2535101 - 2535080 - f 100 -6.6 -5.65177 | gap 1, opp_overlap 2535080 ACAGGCATAAAAAAA CCGAC-CCA GATCG TGGTGTCGG TTTTTTGTGCTGCTT TERM 2754 2535080 - 2535101 + F 89 -6.6 -5.33785 | gap 1, opp_overlap 2535080 ACAGGCATAAAAAAA CCGAC-CCA GATCG TGGTGTCGG TTTTTTGTGCTGCTT TERM 2755 2535402 - 2535375 - f 71 -4.2 -4.8048 | TTTTTAGAGTAAAAA GACAGTTACAAA GGTT TTAATAACCGTC TATGGATATAGATTC TERM 2756 2536063 - 2536051 - g 73 -7.7 -4.05446 | overlap 2536055 TGGCCGAAGTAGAAA TGCAC GCA GTGCA AACTAGCGGCAACTG Sde_2013 2535714 - 2537378 + | sulphite reductase Sde_2014 2537362 - 2537859 + | hypothetical protein TERM 2757 2537900 - 2537886 - f 89 -11.4 -3.57263 | opp_overlap 2537886 AGTTTTACCCGTAAA GGAGGC TAT GCCTCC TTTTTTTTGCCTTTA TERM 2758 2537886 - 2537900 + F 100 -11.4 -5.89947 | opp_overlap 2537886 AGTTTTACCCGTAAA GGAGGC TAT GCCTCC TTTTTTTTGCCTTTA TERM 2759 2538175 - 2538207 + G 85 -3.3 -5.51353 | overlap 2538178 2538180 ATAAAAGATGTGCAC TACGTAGCCGAGATG TCT CATATCGGCATCATA TTTTTATTGTTTTTG TERM 2760 2538291 - 2538301 + G 74 -5.4 -4.59853 | CAGTATTGCCCTCAT TAGC TCC GCTA TTTTTGGAGCATTAG Sde_2015 2538016 - 2539182 + | sodium/hydrogen antiporter TERM 2761 2539217 - 2539261 + T 71 -6.7 -4.14472 | gap 1, opp_overlap 2539223, overlap 2539223 GCAAGGAAGGGTTAG TGAAAAGCCATCAG-CCTAA AAATAA TTATGACTGATGGCTTTTAA TTTTGCGGCTATTAG TERM 2762 2539223 - 2539255 + T 75 -5.7 -4.67038 | gap 1, opp_overlap 2539223, overlap 2539217 AAGGGTTAGTGAAAA GCCATCAG-CCTAA AAATAA TTATGACTGATGGC TTTTAATTTTGCGGC TERM 2763 2539255 - 2539223 - T 76 -7.9 -4.18762 | gap 1, opp_overlap 2539223 2539217 AAGGGTTAGTGAAAA GCCATCAGCC-TAA AAATAA TTATGACTGATGGC TTTTAATTTTGCGGC Sde_2016 2540389 - 2539292 - | putative periplasmic protease TERM 2764 2539983 - 2539995 + g 73 -7.7 -4.04209 | GCGGTAATTACTTCA CGCAA CTC TTGCG TTTCTGATGCTTTAA Sde_2017 2541061 - 2540405 - | hypothetical protein Sde_2018 2541878 - 2541063 - | NTP pyrophosphohydrolase Sde_2019 2543596 - 2541875 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2765 2543214 - 2543202 - G 80 -6.2 -4.82901 | opp_overlap 2543202 2543211 TGGCTCTCAGAAAAA GCGG GCTCG CCGC GCATTTTGCGCAATG nhaB 2544050 - 2545549 + | sodium/proton antiporter TERM 2766 2545578 - 2545596 + T 100 -11.7 -4.27316 | opp_overlap 2545578 ACGCTCATAGTAAAA CGCCGAG GAATG CTCGGCG TTTTACGTTACAGGC TERM 2767 2545596 - 2545578 - T 100 -11.7 -4.3467 | opp_overlap 2545578 ACGCTCATAGTAAAA CGCCGAG GAATG CTCGGCG TTTTACGTTACAGGC Sde_2021 2546341 - 2545625 - | DNA polymerase III, epsilon subunit Sde_2022 2547316 - 2546432 - | generic methyl-transferase TERM 2768 2547285 - 2547296 + g 82 -5.8 -5.24129 | opp_overlap 2547285 AAAGTGTCCGCAAAA CTGC CTAT GCAG TTTTTTATCGAAAAG Sde_2023 2547460 - 2548278 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2769 2549502 - 2549481 - g 78 -5.7 -4.90778 | CTCATTCAAAGAAAA GCTAGCCGG CATT CCGCCTGGC AAACGAATCACATGG Sde_2024 2548465 - 2550096 + | low molecular weight phosphotyrosine protein phosphatase Sde_2025 2551536 - 2550106 - | putative signal transduction protein TERM 2770 2550156 - 2550133 - G 73 -9.6 -3.40403 | opp_overlap 2550132 2550133 2550135 CCCCTTCGACGATAA CAGGTTCAAG CTCG CTTGAGCCTG ATTTGAAAAGTGCTT TERM 2771 2550133 - 2550156 + g 76 -11.8 -2.73619 | opp_overlap 2550133, overlap 2550132 2550135 CCCCTTCGACGATAA CAGGTTCAAG CTCG CTTGAGCCTG ATTTGAAAAGTGCTT TERM 2772 2553098 - 2553073 - g 81 -8.3 -4.5442 | opp_overlap 2553073, overlap 2553074 GGTGTAACCATAAAA CCGTGGCAAAC AGAG GTTTGGCACGA GTCTGTAGAAAGTTA TERM 2773 2553097 - 2553074 - g 73 -9.6 -3.3217 | opp_overlap 2553073, overlap 2553073 GTGTAACCATAAAAC CGTGGCAAAC AGAG GTTTGGCACG AGTCTGTAGAAAGTT TERM 2774 2553478 - 2553468 - g 84 -8.2 -4.59511 | AACATTCGCCAAAAA CGCC GCC GGCG AAACCATTCCAGACG Sde_2026 2551852 - 2553945 + | tetraacyldisaccharide-1-P 4'-kinase Sde_2027 2553958 - 2555625 + | periplasmic oligopeptide-binding protein precursor TERM 2775 2555820 - 2555841 + G 71 -10.2 -2.60075 | opp_overlap 2555818, overlap 2555819 GACGCCAATATTATT CTAGGCCT GTTTGA AGGCCTAG CTTCATTAGACCCGA Sde_2028 2555634 - 2557268 + | oligopeptide ABC transporter periplasmic oligopeptide-binding protein Sde_2029 2557274 - 2558209 + | phosphoglycerate mutase 1 Sde_2030 2558209 - 2559090 + | oligopeptide ABC transporter permease protein TERM 2776 2559581 - 2559597 + G 71 -8 -3.90112 | overlap 2559562 GGTATGCGACAGCGC GCCATG ATCGC CATGGC TTTGATTACCGAGCC TERM 2777 2559704 - 2559719 + G 79 -3.2 -5.27335 | opp_overlap 2559704, overlap 2559705 TCGATCCAGCAGAAG CGACAC CTAA GTGTCA TTTTTATTTCGCACG TERM 2778 2560121 - 2560108 - g 75 -9.5 -3.51202 | TATTAAATTAATTAA CGCCG ATAA CGGCG AAATAAACATAGACC Sde_2031 2559095 - 2560714 + | ABC transporter ATP-binding protein Sde_2032 2560835 - 2561740 + | SSU ribosomal protein S6P modification protein TERM 2779 2562535 - 2562522 - g 79 -4.5 -5.23016 | overlap 2562513 AAATAACCTAAAAAA CCTAG GTGA CCAGG TACAAAAAGGTGATG TERM 2780 2562615 - 2562601 - g 71 -7.1 -4.18401 | opp_overlap 2562601 2562600 CTAGACACCGTAAAA GCCAG TCGCT CTGGC ATTATTATTGGCAAA TERM 2781 2562658 - 2562680 + G 73 -4.2 -4.82901 | overlap 2562660 CTGGTGCAAGAAGGC GATGCAATGT TCC ATATTGCATA TTTTTCTGAAGCAGA TERM 2782 2562660 - 2562678 + G 71 -6.8 -4.03995 | overlap 2562658 GGTGCAAGAAGGCGA TGCAATGT TCC ATATTGCA TATTTTTCTGAAGCA Sde_2033 2561743 - 2562780 + | hypothetical protein Sde_2034 2562802 - 2563239 + | transglutaminase-like TERM 2783 2563257 - 2563288 + T 100 -15.4 -2.84794 | opp_overlap 2563261, overlap 2563261 AATTGATCGACTTCT TAAACTACCCGTTA ATAC TAGCGGGTAGTTTA TGCTTCTGCGATTAC TERM 2784 2563284 - 2563261 - T 76 -9.6 -3.55761 | opp_overlap 2563257 2563261 GATCGACTTCTTAAA CTACCCGTTA ATAC TAGCGGGTAG TTTATGCTTCTGCGA TERM 2785 2563261 - 2563284 + T 100 -11.8 -4.1021 | opp_overlap 2563261, overlap 2563257 GATCGACTTCTTAAA CTACCCGTTA ATAC TAGCGGGTAG TTTATGCTTCTGCGA Sde_2035 2563734 - 2563309 - | hypothetical protein TERM 2786 2563534 - 2563584 + g 70 -2 -5.0133 | gap 1 ATAAACACCAGTTTG CACCAAAGTACTGCTACGCTCTG GGTGCA TAGGGTTTA-CGGTAGTTTGGTG TTTTTTAAACAGATA Sde_2036 2564413 - 2563838 - | hypothetical protein Sde_2037 2565088 - 2564477 - | putative haloacid dehalogenase-like hydrolase TERM 2787 2565391 - 2565375 - g 79 -8.7 -4.28432 | AAGCTTAAGCGAAAA CCAGCTC ACC GAGCTAG AGCAACAACCAGAGC TERM 2788 2565839 - 2565824 - g 72 -9 -3.49475 | GCGACCTGCATAGAA GCTTGG TAGC CCAAGC TACAAGCCACCCTGT Sde_2038 2565220 - 2566413 + | O-succinylhomoserine sulfhydrylase Sde_2039 2567700 - 2566486 - | amidophosphoribosyl transferase TERM 2789 2567116 - 2567104 - G 82 -7.7 -4.59109 | opp_overlap 2567104 TACATCTTTTAAAAA CTGCA TAC TGCAG TATTCCAGCAAGGGA Sde_2040 2568008 - 2567706 - | hypothetical protein TERM 2790 2567913 - 2567927 + g 71 -7 -4.14543 | TATTTGGCTCCAACC GCGGGC TTT GCGCGC TTCTTTGATGTTTTG TERM 2791 2568352 - 2568369 + r 80 -9.8 -3.69482 | opp_overlap 2568352 ATTGGGCATAAAAAA GCCGGC ATAAAA GCCGGC TTCTGTATTACATGC TERM 2792 2568369 - 2568352 - R 100 -9.8 -5.24531 | opp_overlap 2568352 ATTGGGCATAAAAAA GCCGGC ATAAAA GCCGGC TTCTGTATTACATGC Sde_2041 2569037 - 2568396 - | response regulator receiver domain-containing protein TERM 2793 2569239 - 2569278 + r 82 -3 -5.42862 | gap 1, opp_overlap 2569249, overlap 2569249 ACACGAATATGCAGC TACAAAAAAAGCCCTGCTT TAA AAGCAGAGC-TTTTTAATA TTTTTTTACGGCTAT TERM 2794 2569249 - 2569269 + r 100 -9.7 -5.04265 | opp_overlap 2569249, overlap 2569239 GCAGCTACAAAAAAA GCCCTGCTT TAA AAGCAGAGC TTTTTAATATTTTTT TERM 2795 2569269 - 2569249 - R 100 -11.9 -5.64274 | opp_overlap 2569249 2569239 GCAGCTACAAAAAAA GCCCTGCTT TAA AAGCAGAGC TTTTTAATATTTTTT Sde_2042 2569949 - 2569299 - | hypothetical protein TERM 2796 2569402 - 2569418 + g 73 -9.5 -3.39844 | overlap 2569400 CTAGCTATTACTGCG GATAACG AAA CGTTATC TATTTGGAATGTAGA TERM 2797 2570717 - 2570680 - g 72 -9.3 -3.48063 | gap 1, opp_overlap 2570677 2570680, overlap 2570677 2570673 TAGTTAAACGTATAA CTCGAACCCAGCAATCAA GTG CTAAT-GCCGAGTTCGAG CTATTTGTCGAGGGT Sde_2043 2570187 - 2570912 + | folylpolyglutamate synthetase Sde_2044 2571831 - 2570950 - | Acetyl-CoA carboxylase carboxyl transferase, beta subunit Sde_2045 2579008 - 2571833 - | tryptophan synthase, alpha chain TERM 2798 2572330 - 2572344 + g 72 -6.4 -4.30576 | opp_overlap 2572330 AGCCATTATACTTAA CAGGTG AAT TACCTG TTTTACTAGTACCAA TERM 2799 2575708 - 2575718 + g 73 -4 -4.76423 | TATCTAACGACCCCA TTTG ATC CAAA TTTTCTATATTTATC TERM 2800 2575827 - 2575815 - G 70 -4.9 -4.49556 | opp_overlap 2575820 TCGCCACTAAACAAA CTAAT CGG ATTAG CCACCTGATCAGTTA TERM 2801 2577521 - 2577531 + g 73 -4 -4.74285 | overlap 2577525 ATCAAGATCGAAGTT TTGT TGC ACAA TTTTATATTCTGCAT Sde_2046 2583120 - 2579011 - | tryptophan synthase, beta chain TERM 2802 2581034 - 2581022 - G 72 -4.8 -4.66163 | AGTGTTATGTAAAAA TCGC TTGTT GCGA GGTAGCTATTAGATG Sde_2047 2584092 - 2583223 - | hypothetical protein TERM 2803 2583658 - 2583681 + g 72 -2.6 -5.04385 | gap 1, opp_overlap 2583662, overlap 2583653 2583659 AGAGCCGCCGCCGAA T-TTATTTGGG TTA TCCAAATAATA TTTTTTAACCATCTC TERM 2804 2583659 - 2583679 + g 73 -7.7 -4.14633 | opp_overlap 2583662, overlap 2583653 2583658 GAGCCGCCGCCGAAT TTATTTGGG TTA TCCAAATAA TATTTTTTAACCATC TERM 2805 2583850 - 2583862 + g 83 -6.3 -5.02074 | opp_overlap 2583850 CTTACTTGCCACTAA GCTAT CCA ATAGC TTTTTTGCCAACTCA Sde_2048 2584894 - 2584100 - | tRNA pseudouridine synthase Sde_2049 2628774 - 2584945 - | hypothetical protein TERM 2806 2589947 - 2589924 - G 79 -11 -3.33885 | AATCCAAATCACCAA GTGCATCCGA ACTA TCGGAAGCAC TTAAACCAAGCGTGT TERM 2807 2592525 - 2592545 + g 72 -5.5 -4.45068 | CATCAGTATCGCTTT CTAATGG ATTTGTG CCATTAG TTTGTTCTTCGAGAT TERM 2808 2597195 - 2597175 - G 72 -8.3 -3.82084 | overlap 2597177 CTGGAACACCAACAA TAGAAACGG TAA CCGTTTCAA ACTCAGTATTCTGAA TERM 2809 2597193 - 2597177 - G 82 -10.9 -3.49169 | overlap 2597175 GGAACACCAACAATA GAAACGG TAA CCGTTTC AAACTCAGTATTCTG TERM 2810 2604831 - 2604811 - G 74 -8.3 -3.92075 | ATCGTTAGCTACAAA GCTGGTG GTGTATA CACCAGC AATCATGCCCTCGCC TERM 2811 2604841 - 2604859 + g 86 -8.8 -4.41548 | ACCAGCAATCATGCC CTCGCCGT CAA ACGGCAAG TTTTGTGCGGTGTCA TERM 2812 2604915 - 2604903 - G 73 -7.7 -4.04319 | overlap 2604908 TTACAAATGTATAAA GAGCA TTG TGCTC AAGCGCAAAACCTTC TERM 2813 2607398 - 2607383 - G 72 -6.2 -4.26019 | opp_overlap 2607386, overlap 2607386 GAATTAGAGTCAAAA CCATTA CCTG TAATGG TAATAATCTCACCGC TERM 2814 2608086 - 2608108 + g 74 -10.6 -3.29364 | opp_overlap 2608081 2608085 2608103 TTGCAGACAACGTAC CCTGGCTTAC AAG GTAAGCAAGG TTGATACTTGCTACT TERM 2815 2627630 - 2627616 - G 71 -3.5 -4.7871 | AACCATCATCAAAAA CAGCA CTTAT TGCCG GCAAGGGGTGAAAGG TERM 2816 2627792 - 2627781 - G 82 -5.8 -5.13741 | opp_overlap 2627781 TTAACGTAATAAAAA GCTC TTCT GAGC TTTCTGCTAAAGGAT TERM 2817 2628779 - 2628766 - G 79 -3.1 -5.42514 | CGACAAACCAAAAAA GCGTT TCAT AACAC CCCTAATATCGACCA Sde_2050 2630392 - 2629697 - | aspartate-semialdehyde dehydrogenase TERM 2818 2630314 - 2630332 + g 72 -8.9 -3.48438 | opp_overlap 2630300, overlap 2630311 ACATTCCATTGTGGA TGGCAGA CATTT TCTGCCA TTGCTTATCGTAGTT Sde_2051 2630516 - 2630932 + | BadM/Rrf2 family transcriptional regulator TERM 2819 2631591 - 2631577 - T 71 -8.6 -3.55622 | TCGAACCGGGCTAAA CGGATT TGC AATCCG GAGCATAACCACTTT Sde_2052 2632389 - 2631832 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 2634329 - 2632491 - | excinuclease ABC subunit C TERM 2820 2633921 - 2633936 + g 100 -6.1 -5.93252 | ATGCATTCGGGAATG GGCCA AAATAC TGGCC TTTTTTCTTTTTGGG Sde_2054 2634985 - 2634389 - | response regulator receiver domain-containing protein Sde_2055 2635740 - 2635126 - | DNA-N1-methyladenine dioxygenase Sde_2056 2636964 - 2635921 - | UDP-N-acetylmuramate dehydrogenase TERM 2821 2636113 - 2636124 + g 74 -5.8 -4.67703 | opp_overlap 2636112 CAGCTTATCAATTAG CCAG CCTG CTGG TATTTTTTTTGTGTT Sde_2057 2637456 - 2636965 - | protein tyrosine phosphatase Sde_2058 2638305 - 2637538 - | chorismate synthase Sde_2059 2639412 - 2638327 - | lipid-A-disaccharide synthase Sde_2060 2639849 - 2639418 - | GTP cyclohydrolase I Sde_2061 2640492 - 2639863 - | MotA/TolQ/ExbB proton channel Sde_2062 2641520 - 2640831 - | phosphoglycerate mutase TERM 2822 2641572 - 2641541 - R 70 -9.4 -2.75712 | overlap 2641538 TCACCTACGCAACTA CGCTTGGACGAG CTGCAATT CGCGCCCAAGCG CGCTCGTGAAAGAAG Sde_2063 2641718 - 2641530 - | phosphohistidine phosphatase SixA Sde_2064 2643051 - 2641957 - | hypothetical protein TERM 2823 2642466 - 2642451 - G 72 -4.7 -4.55697 | AGGCCCAGAAATAAA TCGCT TCCACC AGCGA AATAAAGCTCGATAA TERM 2824 2642560 - 2642540 - G 72 -3.2 -4.96848 | TGCCCCAGATAAAAA CGGTGCAC ACCAA ATCCACCG AGGAAAAACGCCAGA TERM 2825 2643171 - 2643187 + r 100 -9.4 -4.75372 | opp_overlap 2643171 GTCAGGCAGAAAAAA GCCCTC GCGTG GAGGGC TTTTTGATAGCTAGT TERM 2826 2643187 - 2643171 - R 100 -9.4 -5.28176 | opp_overlap 2643171 GTCAGGCAGAAAAAA GCCCTC GCGTG GAGGGC TTTTTGATAGCTAGT Sde_2065 2644531 - 2643236 - | ammonium transporter Sde_2066 2645239 - 2644754 - | ATP-binding region, ATPase-like Sde_2067 2647320 - 2645269 - | hypothetical protein Sde_2068 2648375 - 2647326 - | hypothetical protein TERM 2827 2647583 - 2647605 + g 75 -11.3 -3.0792 | opp_overlap 2647581 2647583 ACTCTTTTACGAATA GGCCTTTGC CGCGT GCAGAGGCC TTCCATGCGATATTG TERM 2828 2648035 - 2647999 - G 81 -3.6 -5.27477 | gap 1, opp_overlap 2648023, overlap 2648000 2648023 AGCTTAACTAAAAAA TGAGCGCTATCCCCTGC GAAC ACAGGGG-CAGCCCCCT TAACTGTTACCTCTA Sde_2069 2649313 - 2648393 - | succinyl-CoA ligase, alpha subunit TERM 2829 2649148 - 2649171 + g 73 -7.4 -4.18506 | opp_overlap 2649136 2649139 2649148 AATGTAGGCCAAGTA CCTTGGCTAA GCAC TGGGCCAAGG TTGTTTTACCCATAC Sde_2070 2650310 - 2649363 - | succinyl-CoA synthetase, beta subunit Sde_2071 2651543 - 2650350 - | dihydrolipoamide dehydrogenase TERM 2830 2651610 - 2651639 + r 73 -8.5 -3.57561 | overlap 2651606 CTAGAAGTTGTTAGC GCTACCGCCATAT TGCT AAGCGGCGGTAGC TTTACGGGATTAACC Sde_2072 2653163 - 2651649 - | amidophosphoribosyltransferase TERM 2831 2652640 - 2652625 - G 72 -9 -3.53012 | TGGGGGTCGCGGAAA GCTACG ACGC CGTAGC TTGCAATCATAGATA Sde_2073 2653682 - 2653176 - | 2-oxoglutarate dehydrogenase, E1 component Sde_2074 2653885 - 2655540 + | response regulator receiver domain-containing protein Sde_2075 2656079 - 2655555 - | succinate dehydrogenase, flavoprotein subunit Sde_2076 2657365 - 2656082 - | dihydrofolate synthase TERM 2832 2656809 - 2656825 + g 78 -6.5 -4.56775 | ACCGCCGTTTGATTT GCACGCA ATA TGCCTGC TTTTTCACGACCGAT TERM 2833 2657388 - 2657330 - G 88 -12.2 -3.6018 | gap 2, opp_overlap 2657337 2657344, overlap 2657337 TAATATACGAGACAA CCCCAAATCAAT--TTCACTTGAATGGA GTGTT TCCATCCAAGTGAGCCATTGATTTAGGG TAGAAAAGCGTGGAG Sde_2077 2658279 - 2657416 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 2834 2657599 - 2657617 + g 79 -8.8 -4.05033 | opp_overlap 2657591 2657592 AGCAAAACCAGCTCG CGCACCTG GCT CAGCTGCG TTTATATCGCCTAAC TERM 2835 2657646 - 2657636 - G 71 -6.8 -4.16284 | overlap 2657641 ATATCGCCTAACAAA GCCA AGC TGGC TGATACGCCACCATA TERM 2836 2657949 - 2657966 + g 72 -2.7 -5.02074 | gap 1, overlap 2657949 2657951 2657952 TCATTGCCACTAGCG C-ATCGGT TTC ACCGGTAG TTTTTTGCGCGGTGG Sde_2078 2659126 - 2658314 - | tryptophan synthase, alpha chain TERM 2837 2658611 - 2658631 + g 76 -2.4 -5.4148 | opp_overlap 2658611, overlap 2658613 AACGTAGTACAAGAA GCCGCTGG CCAAA CCAACGAC TTTTTTCATTCTTTC TERM 2838 2658631 - 2658611 - G 71 -7.5 -3.85522 | opp_overlap 2658611 2658613 AACGTAGTACAAGAA GCCGCTGGC CAA ACCAACGAC TTTTTTCATTCTTTC Sde_2079 2660424 - 2659213 - | tryptophan synthase subunit beta TERM 2839 2660098 - 2660082 - G 72 -8.7 -3.71848 | opp_overlap 2660084, overlap 2660084 CGGTTTCAGCAATAA CACGGGT TTT ACCCGTA TACTTGGCTAATAGT TERM 2840 2660096 - 2660084 - G 70 -9.1 -3.44284 | opp_overlap 2660084, overlap 2660082 GTTTCAGCAATAACA CGGGT TTT ACCCG TATACTTGGCTAATA Sde_2080 2661141 - 2660521 - | phosphoribosylanthranilate isomerase Sde_2081 2662190 - 2661321 - | pseudouridylate synthase TERM 2841 2662239 - 2662262 + r 73 -5.2 -4.7339 | opp_overlap 2662239 TTAGTCAAAAAAAAA CCTTGCCCAC CAAA GTAAGCAAGG TTTTTACGGTTTGTT TERM 2842 2662262 - 2662239 - R 100 -9.6 -6.11644 | opp_overlap 2662239 TTAGTCAAAAAAAAA CCTTGCCCAC CAAA GTAAGCAAGG TTTTTACGGTTTGTT Sde_2082 2666021 - 2662284 - | Tfp pilus assembly protein FimV-like TERM 2843 2662557 - 2662544 - G 84 -8.1 -4.57073 | opp_overlap 2662532 2662543 2662544, overlap 2662532 TAGCCTTTGTAAAAA GGGTG TCAT CACCC ATTTCTTCTGTGGCT TERM 2844 2665208 - 2665232 + g 71 -7.2 -4.18676 | gap 1 TTTGCTGTGCCACGC TTCGCACCGCC TCTT GGCG-TGTGAA TTCTTTAATTTGTGA TERM 2845 2666403 - 2666418 + r 87 -5.4 -5.44721 | opp_overlap 2666394 ATTTAATTGCTTTGG CAACGG CACC CTGTTG TTTTTTTGGGCTAAT TERM 2846 2666517 - 2666533 + r 83 -10.8 -3.57106 | opp_overlap 2666517, overlap 2666513 CACGGGCACAAAAAA GCCGGG CTTAA CCCGGC TTCATTTGAATTGCG TERM 2847 2666533 - 2666517 - R 100 -11.5 -5.252 | opp_overlap 2666517 2666513 CACGGGCACAAAAAA GCCGGGC TTA ACCCGGC TTCATTTGAATTGCG TERM 2848 2666582 - 2666566 - R 71 -8.7 -3.30635 | opp_overlap 2666566 2666565 TAAATTGCTCTAGAA CTTACGC TTC GCGCAAG ATTCTCAACATTCTG Sde_2083 2667673 - 2666567 - | aspartate-semialdehyde dehydrogenase TERM 2849 2667590 - 2667578 - G 78 -4.9 -5.02476 | AGAGGTGGTAAAAAA TATTG GCT CAATA CCAGCAAAATCATTC Sde_2084 2668822 - 2667749 - | 3-isopropylmalate dehydrogenase TERM 2850 2668871 - 2668857 - R 80 -10 -3.5936 | opp_overlap 2668856 2668853 TTTAAACGTTGTAAA GGTTGG ATA CCAACC GTAATTATTCAGATG leuD 2669523 - 2668876 - | isopropylmalate isomerase small subunit Sde_2086 2670957 - 2669539 - | isopropylmalate isomerase large subunit TERM 2851 2669601 - 2669564 - G 84 -7.5 -4.78753 | overlap 2669565 CGAACATCAACAAAA TGGCCAGCTATGGCAGC TGCT GCCGCCATCGCAGGGCT AACCAAATGCGTTCG TERM 2852 2669600 - 2669565 - G 79 -11 -3.46167 | overlap 2669564 GAACATCAACAAAAT GGCCAGCTATGGCAGC TGCT GCCGCCATCGCAGGGC TAACCAAATGCGTTC TERM 2853 2671955 - 2671928 - g 78 -5.4 -4.87665 | gap 1, opp_overlap 2671929 2671930, overlap 2671929 2671930 GGTCATTCATAAAAA GCGCACTCTCGGC AAT GCCGCGCGCGC-C TTTTTTGAAGTTTTA TERM 2854 2671929 - 2671955 + G 77 -3.4 -5.15117 | opp_overlap 2671928 2671929 2671930, overlap 2671930 GTCATTCATAAAAAG CGCACTCTCGGC AAT GCCGCGCGCGCC TTTTTTGAAGTTTTA Sde_2087 2671104 - 2672003 + | LysR family transcriptional regulator Sde_2088 2672073 - 2672843 + | hypothetical protein TERM 2855 2672854 - 2672901 + T 100 -15.8 -3.91488 | opp_overlap 2672862 2672868, overlap 2672868 TTTAAACAAACCTTG CTCACAAACAAAAACGCCGCAT AGAT GTGCGGCGTTTTTGTTTTTAGG TTATTTAAACAACTT TERM 2856 2672893 - 2672862 - T 100 -17.5 -3.86194 | opp_overlap 2672854 2672868, overlap 2672868 AACCTTGCTCACAAA CAAAAACGCCGCA TAGATG TGCGGCGTTTTTG TTTTTAGGTTATTTA TERM 2857 2672887 - 2672868 - T 100 -10.7 -5.38054 | opp_overlap 2672868 2672854, overlap 2672862 GCTCACAAACAAAAA CGCCGCA TAGATG TGCGGCG TTTTTGTTTTTAGGT TERM 2858 2672868 - 2672887 + T 100 -11.4 -5.63236 | opp_overlap 2672862 2672868, overlap 2672854 GCTCACAAACAAAAA CGCCGCAT AGAT GTGCGGCG TTTTTGTTTTTAGGT Sde_2089 2673912 - 2672902 - | hypothetical protein TERM 2859 2673079 - 2673065 - G 72 -8.6 -3.67564 | opp_overlap 2673074 AACCACTGATGCAAA CTTGCA CGA TGCAAG CGAGTTGCGGTTTGG Sde_2090 2675258 - 2674116 - | transporter, putative TERM 2860 2674439 - 2674425 - G 82 -5.6 -5.11063 | overlap 2674426 AGCACCCAACAAAAA CCAGCG CAA CGCTGT GGTGACAATGGCCAA TERM 2861 2674438 - 2674426 - G 72 -9.1 -3.65554 | overlap 2674425 GCACCCAACAAAAAC CAGCG CAA CGCTG TGGTGACAATGGCCA TERM 2862 2675297 - 2675280 - R 100 -12.7 -4.90471 | ACCCAAAAGAGAAAA CGGTGCC TGTT GGCACCG CAAGGAAAGGTTTGA Sde_2091 2676428 - 2675313 - | chorismate synthase TERM 2863 2676367 - 2676353 - G 74 -11.4 -2.81815 | opp_overlap 2676347 2676364, overlap 2676350 GGCAACCATCAATTA TGGCGC CTA GCGCCA AACCGTGGCTTTCGC TERM 2864 2676440 - 2676460 + r 82 -10.3 -3.63305 | opp_overlap 2676432, overlap 2676444 ACATAACTTTTAATT CTCCCGGCG TAC CGCCGTGGG TTTAAAACTTGTATA TERM 2865 2676444 - 2676456 + r 74 -10.5 -2.65279 | opp_overlap 2676432, overlap 2676440 AACTTTTAATTCTCC CGGCG TAC CGCCG TGGGTTTAAAACTTG Sde_2092 2677384 - 2676482 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 2866 2677332 - 2677303 - G 71 -7.1 -4.13561 | gap 1, overlap 2677322 CGTGGCCAAAAAAGA GATCC-CCACGAGC AAA ACACGTGGCGGACC AGCGTATCCAATCTC TERM 2867 2677445 - 2677409 - H 71 -8.2 -3.56643 | opp_overlap 2677418, overlap 2677418 TCTAGATTTTGCAAA TGGTCAA-AAGGCGGCTA TTC TAGC-GCCTTTTTGCCCA AGCGCCCACTTGAAG TERM 2868 2677418 - 2677435 + H 74 -6.3 -4.56597 | gap 1, opp_overlap 2677418 2677409 TGCAAATGGTCAAAA GGCGGCTA TTC TAGC-GCC TTTTTGCCCAAGCGC Sde_2093 2677573 - 2678112 + | GTP cyclohydrolase Sde_2094 2679122 - 2678247 - | hypothetical protein Sde_2095 2680014 - 2679115 - | putative hydrolase TERM 2869 2679326 - 2679313 - G 77 -3.8 -5.15634 | CACTTCATCAAAAAA CGCA TTTATT TGCG CCATTGTAAGCTTTA Sde_2096 2680514 - 2680038 - | putative phosphohistidine phosphatase, SixA Sde_2097 2680884 - 2680522 - | glucose-1-phosphate thymidylyltransferase, long form gpsA 2681960 - 2680884 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 2870 2682035 - 2682060 + r 93 -11.9 -3.70919 | opp_overlap 2682035 TCAAAGTACAGAAAA CCCCTGAATAG ATAG CTAGTCAGGGG TTCTTGCGCTTTAAG TERM 2871 2682060 - 2682035 - R 100 -11.9 -4.6468 | opp_overlap 2682035 TCAAAGTACAGAAAA CCCCTGAATAG ATAG CTAGTCAGGGG TTCTTGCGCTTTAAG Sde_2099 2684029 - 2682122 - | heat shock protein 90 TERM 2872 2683112 - 2683098 - G 73 -4.2 -4.79352 | opp_overlap 2683097 2683103 TCATCCATAATAAAA GTGCGT TGT ACGTAC AATTTAACACCACGC TERM 2873 2683777 - 2683797 + g 70 -4.7 -4.40311 | overlap 2683779 GATTCATGCCTATGC CATTGTCAG TAA TTGACAAGG TTTTGGCTTCTTTAT Sde_2100 2684739 - 2684422 - | hypothetical protein TERM 2874 2684876 - 2684862 - R 100 -10 -5.88197 | opp_overlap 2684862 GCAAACACAAAAAAA GCCTCT AGA AGAGGC TTTTTGAGGATTAAG TERM 2875 2684862 - 2684876 + r 100 -10 -4.62471 | opp_overlap 2684862 GCAAACACAAAAAAA GCCTCT AGA AGAGGC TTTTTGAGGATTAAG Sde_2101 2685458 - 2684904 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2876 2685626 - 2685641 + r 100 -10.4 -4.7339 | opp_overlap 2685626 ACTAGGTACAAAAAA GGGCTC CGAA GAGCCC TTTTTACGCTTTATT TERM 2877 2685641 - 2685626 - R 100 -10.4 -5.28778 | opp_overlap 2685626 ACTAGGTACAAAAAA GGGCTC CGAA GAGCCC TTTTTACGCTTTATT Sde_2102 2686539 - 2685667 - | succinyl-CoA synthetase (ADP-forming) alpha subunit sucC 2687705 - 2686539 - | succinyl-CoA synthetase subunit beta TERM 2878 2687845 - 2687883 + r 81 -11 -3.25653 | opp_overlap 2687853, overlap 2687866 2687871 TGCCAAGTCCATCTG TATACCAATTCGCCCAGC AAT GCTGGGCGAATAGAAGTA TTCCCTTGCTATTTT TERM 2879 2687875 - 2687853 - R 100 -17.8 -3.26471 | opp_overlap 2687845 2687866 2687871 CCATCTGTATACCAA TTCGCCCAGC AAT GCTGGGCGAA TAGAAGTATTCCCTT Sde_2104 2689353 - 2687899 - | dihydrolipoamide dehydrogenase TERM 2880 2689425 - 2689450 + r 100 -14.8 -4.41494 | CGAATGTTAACGCTA TGCGACACGC CCTAAA GCGTGTCGCA TTTTGCTTAAACCTC Sde_2105 2690668 - 2689457 - | dihydrolipoamide acetyltransferase TERM 2881 2690209 - 2690246 + g 74 -10.5 -3.29511 | gap 1, overlap 2690213 2690214 GAGCAGCAGCTTTTG GCGCGGCAGCTGGTGCAG GTG CTGCAGCAGCGGCAG-GC TTGTAACCAGCTACG kgd 2693586 - 2690725 - | alpha-ketoglutarate decarboxylase TERM 2882 2690893 - 2690905 + g 73 -7.7 -4.14472 | opp_overlap 2690893, overlap 2690877 GTGCTGGCTAGAGTA CCAAG CGC CTTGG TTTTGCGGCTCTTCC TERM 2883 2693031 - 2693057 + g 85 -5.9 -5.29782 | gap 1, opp_overlap 2693031, overlap 2693034 TAGTAATGTGCATAA CTT-CTGCGCCA ATGT TGCCGCAGTAAG TTTTTTCTAGGTCTG sdhB 2694510 - 2693806 - | succinate dehydrogenase iron-sulfur subunit TERM 2884 2694115 - 2694146 + g 72 -8.6 -3.68836 | opp_overlap 2694125, overlap 2694113 TTCACGATCTTCTGG CGACTGCAAACGCT CAAT AGCGGGTGCAGGCG TGTTGTTTTGCAAAT sdhA 2696321 - 2694549 - | succinate dehydrogenase flavoprotein subunit Sde_2109 2696693 - 2696325 - | succinate dehydrogenase subunit D Sde_2110 2697061 - 2696687 - | succinate dehydrogenase subunit C TERM 2885 2698586 - 2698567 - g 73 -4.3 -4.82901 | opp_overlap 2698567 CCGCGTTTACAAAAA CTTTGAC CCACGC GCCAAAG TTATGAAAGAAACCT Sde_2111 2697581 - 2698945 + | citrate synthase TERM 2886 2698986 - 2698971 - T 100 -10.4 -4.46212 | opp_overlap 2698971 GTCTTTACTATAAAA GCCGCT AATT AGCGGC TTTTTTTATGTTTCA TERM 2887 2698971 - 2698986 + T 100 -10.4 -5.88197 | opp_overlap 2698971 GTCTTTACTATAAAA GCCGCT AATT AGCGGC TTTTTTTATGTTTCA Sde_2112 2699764 - 2699039 - | Sulfate adenylyltransferase, small subunit TERM 2888 2699888 - 2699875 - R 100 -9.5 -5.60993 | GCGGGCACAAAAAAA GCGGC CCAG GCCGC TCAGACTGATGACAA TERM 2889 2700151 - 2700138 - R 70 -9.5 -2.77283 | opp_overlap 2700138, overlap 2700135 TTATCAATAAACTGA GCGGC CTAG GCCGC TTTTTCACACTTGCC TERM 2890 2700138 - 2700151 + r 100 -9.5 -4.62471 | opp_overlap 2700135 2700138 TTATCAATAAACTGA GCGGC CTAG GCCGC TTTTTCACACTTGCC Sde_2113 2701274 - 2700189 - | dTDP-glucose 4,6-dehydratase Sde_2114 2702913 - 2701453 - | chorismate mutase, gamma, beta and epsilon TERM 2891 2701871 - 2701841 - G 74 -11.1 -2.83112 | overlap 2701832 AGGTAATTGAGTATA CGGCCGCCATTGG CCATT CCACTGGCAGCCA ATACCACCGCTGGGC TERM 2892 2702365 - 2702353 - G 71 -10.5 -2.59 | overlap 2702340 2702352 2702350 ATCGCCAGAGAACAC CGCCC TGT GGGCG TAATCATCCCCTTTT TERM 2893 2703012 - 2702979 - R 100 -8.9 -5.42259 | gap 1, overlap 2702982 TTAGGGCTAAAAAAA TAA-GATTCGGTGGGC AAT GCCCACCGTACCGCTA ATCGTTGTTAAATAG TERM 2894 2703008 - 2702982 - R 100 -14.4 -4.79949 | overlap 2702979 GGGCTAAAAAAATAA GATTCGGTGGGC AAT GCCCACCGTACC GCTAATCGTTGTTAA Sde_2115 2704176 - 2703010 - | DNA gyrase, subunit A Sde_2116 2706070 - 2705111 - | putative nucleotide di-P-sugar epimerase or dehydratase Sde_2117 2707271 - 2706147 - | ubiquinone biosynthesis O-methyltransferase TERM 2895 2706206 - 2706188 - G 95 -11.8 -4.21194 | opp_overlap 2706188 GGCCATGAGCTAAAA GCAAAGCA TGT TGCTTTGC CAGACCTAGGTCACT Sde_2118 2708038 - 2707271 - | HAD family hydrolase Sde_2119 2708796 - 2708035 - | glycosyl transferase, group 2 family protein TERM 2896 2708542 - 2708554 + g 71 -3.3 -4.7373 | opp_overlap 2708535 2708542 TAAAAATGCCAAAAA TCGCC CTC GGCTA TTTTTAATCCCATAA TERM 2897 2708554 - 2708542 - G 71 -3.3 -4.7657 | opp_overlap 2708542, overlap 2708535 TAAAAATGCCAAAAA TCGCC CTC GGCTA TTTTTAATCCCATAA Sde_2120 2709965 - 2708793 - | hypothetical protein TERM 2898 2709757 - 2709745 - G 85 -3.4 -5.61596 | ATGGCCATAAAAAAA TAGC ACACA GCTA TCACCGCTATAACAC Sde_2121 2711137 - 2709962 - | glycosyltransferase-like protein Sde_2122 2711662 - 2711156 - | CheW protein Sde_2123 2712602 - 2711718 - | CheW protein TERM 2899 2711931 - 2711943 + g 72 -2.7 -5.05577 | overlap 2711939 CTCAAATTTCGCACC CTTTG ATA TAAAG TTTTTACTTTCGTTT Sde_2124 2714018 - 2712633 - | hypothetical protein Sde_2125 2715118 - 2714051 - | 4-alpha-L-fucosyltransferase TERM 2900 2714093 - 2714104 + g 79 -3 -5.35354 | overlap 2714088 ATTCTTATAGTTTTC TACT GAAA AGTA TTTTTTAATTATCTG Sde_2126 2716531 - 2715560 - | putative NDP-hexose-3-ketoreductase Sde_2127 2717310 - 2716543 - | response regulator receiver domain-containing protein Sde_2128 2718447 - 2717311 - | TDP-4-oxo-6-deoxy-D-glucose transaminase Sde_2129 2719370 - 2718447 - | methionyl-tRNA formyltransferase-like Sde_2130 2720233 - 2719367 - | glucose-1-phosphate thymidylyltransferase Sde_2131 2721321 - 2720245 - | dTDP-glucose 4,6-dehydratase TERM 2901 2720363 - 2720379 + g 74 -5.9 -4.62708 | GTCTCAAAAGTTTCT TTGGGTT GCC AACCTAA TTCTTTTTGTATCTT Sde_2132 2722346 - 2721324 - | chain length determinant protein Sde_2133 2724125 - 2723070 - | ATPase TERM 2902 2724102 - 2724081 - G 70 -5.1 -4.3953 | opp_overlap 2724100, overlap 2724082 TTTAACTACAACAAA GGCAGTAAC AAAC GCTACTGCG AGGATTCCGAATCCT TERM 2903 2724153 - 2724176 + r 71 -8.2 -3.51329 | gap 1 TTACTTAGAGTTGGT TAC-GCGTGCA TTT TGCGCGCAGTA TTATACTTCAAACTA Sde_2134 2725667 - 2724273 - | mannose-1-phosphate guanylyltransferase (GDP) Sde_2135 2726152 - 2725856 - | hypothetical protein Sde_2136 2726617 - 2727216 + | adenylylsulfate kinase TERM 2904 2727292 - 2727275 - T 100 -12.7 -5.76237 | opp_overlap 2727275 TATACAAATAAAAAA GGCGACC AATT GGTCGCC TTTTTAGCTTTGAAA TERM 2905 2727275 - 2727292 + T 100 -12.7 -4.81249 | opp_overlap 2727275 TATACAAATAAAAAA GGCGACC AATT GGTCGCC TTTTTAGCTTTGAAA rpsA 2729005 - 2727323 - | 30S ribosomal protein S1 Sde_2138 2730524 - 2729319 - | hypothetical protein Sde_2139 2730841 - 2730536 - | flagellar transport protein FliP Sde_2140 2731549 - 2730875 - | cytidylate kinase TERM 2906 2731655 - 2731636 - R 80 -10 -3.71645 | AACTGCATAGGTAAA GCTAAGGG GTTG CCCCTAGC TACCTAGTGATGCAC Sde_2141 2732367 - 2731651 - | orotidine-5'-phosphate decarboxylase TERM 2907 2732577 - 2732555 - R 100 -11.2 -4.45544 | TGTTATTAACGAAAA CACGGCGAGC AAC ACCCGCCGCG TAACTGCTTTTATGG Sde_2142 2732976 - 2732617 - | flagellar motor switch protein FliM TERM 2908 2733336 - 2733312 - R 100 -11.5 -5.65496 | opp_overlap 2733312 CAGGAAAAATAAAAA GCCTGCAAGCT ATT AACTTACAGGC TTTAAAATAGTTCTA Sde_2143 2734792 - 2733377 - | sulfate adenylyltransferase subunit 1 Sde_2144 2735200 - 2734835 - | hypothetical protein Sde_2145 2736157 - 2735246 - | sulfate adenylyltransferase subunit 2 Sde_2146 2738465 - 2736228 - | prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2909 2737813 - 2737792 - G 76 -8.7 -4.17089 | opp_overlap 2737792 2737793 2737807, overlap 2737793 GTGAAATCTCTAAAA CCTCCCGCT GCAT AGCGGAAGA TATTTTCGTTTTGGT TERM 2910 2737812 - 2737793 - G 70 -10 -3.09772 | opp_overlap 2737792 2737793 2737807, overlap 2737792 TGAAATCTCTAAAAC CTCCCGCT GCAT AGCGGAAG ATATTTTCGTTTTGG Sde_2147 2739583 - 2738462 - | prephenate dehydratase TERM 2911 2738854 - 2738823 - G 84 -10.8 -3.87869 | opp_overlap 2738826 GTAAGGCCGTATAAA TCTGCCGCCATAGC GCCT GCAATGGCAGCTGA ATTCCACTCGCCTTT TERM 2912 2739628 - 2739606 - R 100 -13.5 -2.9162 | opp_overlap 2739604, overlap 2739603 TAACTCCGTAAATTA GGTGACGAC TATGC GTCGTCACC AGTTGCGTCTTCGTC Sde_2148 2742274 - 2739614 - | DNA gyrase subunit A Sde_2149 2742551 - 2743891 + | N-ethylammeline chlorohydrolase Sde_2150 2743902 - 2744612 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2913 2744660 - 2744645 - f 82 -3.2 -5.46629 | overlap 2744647 AACACTGTAAAAAAA GCGTCT CTTT AGAAGC GTACTATTGAGACTT Sde_2151 2744727 - 2745413 + | flagellar biosynthesis chaperone FliJ-like protein Sde_2152 2745410 - 2746174 + | ATPase FliI/YscN TERM 2914 2746228 - 2746199 - T 76 -10.8 -2.60904 | opp_overlap 2746204, overlap 2746204 TTACAATCATAATAC TAAAACGGCGAG CTAACC CTCGCCGTTTTT ATTTGTGTTAGAGCC TERM 2915 2746204 - 2746223 + T 100 -10.7 -5.4659 | opp_overlap 2746199 2746204 ATCATAATACTAAAA CGGCGAG CTAACC CTCGCCG TTTTTATTTGTGTTA TERM 2916 2746223 - 2746204 - T 100 -10.7 -4.47259 | opp_overlap 2746204, overlap 2746199 ATCATAATACTAAAA CGGCGAG CTAACC CTCGCCG TTTTTATTTGTGTTA Sde_2153 2747073 - 2746255 - | hypothetical protein Sde_2154 2747550 - 2747146 - | flagellar motor switch protein FliG Sde_2155 2748091 - 2747606 - | flagellar FliF M-ring protein Sde_2156 2749501 - 2748344 - | flagellar hook-basal body complex protein FliE TERM 2917 2749282 - 2749298 + g 73 -4.3 -4.81752 | ATGCTTCTGGCTCGG TGCGGGC TAA GCTGGCA TTTTTAGGTGTTTTT TERM 2918 2749336 - 2749347 + g 76 -2.2 -5.28826 | GTGCTTTAATTACAT TTGC TTCT GCGA TTTTTTCTGGCGTTT Sde_2157 2750298 - 2749498 - | putative plasmid partitioning protein Sde_2158 2751371 - 2750505 - | Fis family transcriptional regulator motC 2752126 - 2751386 - | flagellar motor protein TERM 2919 2752030 - 2752018 - G 84 -10.5 -3.8512 | opp_overlap 2752017 CACCCACTACAACAA GGGCC GCC GGCCC ATTGACTAGGGATGT Sde_2160 2753239 - 2752142 - | chemotaxis-specific methylesterase TERM 2920 2752909 - 2752919 + g 74 -5.4 -4.59773 | opp_overlap 2752899, overlap 2752899 CTGAATCGCGGGATA CTTC AGC GAAG TTTTTAGGAATAAAA Sde_2161 2755581 - 2753278 - | putative CheA signal transduction histidine kinases TERM 2921 2754144 - 2754154 + g 72 -3.2 -4.99035 | GTGGATCTGCTAACG CTTC TAC GAGG TTTTTATCTAAATCG TERM 2922 2754179 - 2754193 + g 74 -3.5 -5.00234 | AAATCGGTTTCTTCA CCTTG TAGCT CGAGG TTTATTTCTTTTTTC Sde_2162 2756393 - 2755593 - | chemotaxis protein CheZ TERM 2923 2755680 - 2755692 + g 73 -2 -5.26875 | GTGAATTTGCGGGCC TTCA CCTTT TGAA TTTTTTGCTTCGCCG Sde_2163 2756797 - 2756411 - | response regulator receiver domain-containing protein Sde_2164 2757742 - 2756990 - | flagellar protein FliS Sde_2165 2758805 - 2757966 - | flagellar number regulator FleN Sde_2166 2760480 - 2758897 - | flagellar biosynthetic protein FlhF TERM 2924 2760041 - 2760051 + g 76 -8.2 -4.11394 | TCTGACGGCGCTTCT CGCG CTT CGCG TTTTGCCGCTAGCAT flhA 2762780 - 2760513 - | flagellar biosynthesis protein FlhA TERM 2925 2761003 - 2761021 + g 72 -5.2 -4.58663 | ATGGGGACTTGCTCG CGCAGTAA ACC TTGCAGCG TTTTTAAGAGCTGAT TERM 2926 2762134 - 2762111 - G 81 -8.2 -4.51174 | gap 1, overlap 2762114 TTATTAGAATTAAAA TAC-CGGCGAC GGA GTCACCGCGTA CAAATTTGCTGGCAC TERM 2927 2762180 - 2762170 - G 80 -6.8 -4.56775 | opp_overlap 2762179 ATCGCTCCGTAAAAA TCCG CTT CGGA TGCCACGTCTTCTCG Sde_2168 2763004 - 2764203 + | hypothetical protein flhB 2765347 - 2764217 - | flagellar biosynthesis protein FlhB Sde_2170 2766149 - 2765364 - | flagellar biosynthetic protein FliR TERM 2928 2765670 - 2765658 - G 78 -4.7 -5.04249 | overlap 2765659 GGTTGAAAAAATAAA GCCGC CAG GCGGG AAAGTAACAAAGCTT Sde_2171 2766424 - 2766155 - | flagellar hook-associated protein fliP 2767363 - 2766521 - | flagellar biosynthesis protein FliP Sde_2173 2767844 - 2767365 - | flagellar biogenesis protein-like Sde_2174 2768370 - 2767963 - | surface presentation of antigens (SpoA) protein fliM 2769364 - 2768363 - | flagellar motor switch protein FliM Sde_2176 2769920 - 2769378 - | flagellar basal body-associated protein FliL TERM 2929 2769714 - 2769766 + g 82 -7 -4.74801 | gap 2 TTTAACTTCTTCAAC TGGCTCCGCCGCACCCTCTTCACC CTCTGCT GGTGCAGCG-G-GCGGCTGAGTCA TTTTTAATACGGTTA TERM 2930 2770139 - 2770111 - R 80 -9 -3.93038 | overlap 2770112 TAGTCGAATAGGAAA GTTTGTGCGTAA ATAGG TTACGCACAAAA TTGAAGTGGGGCTAA TERM 2931 2770138 - 2770112 - R 93 -12.5 -2.95341 | overlap 2770111 AGTCGAATAGGAAAG TTTGTGCGTAA ATAGG TTACGCACAAA ATTGAAGTGGGGCTA Sde_2177 2771634 - 2770177 - | flagellar hook-length control protein-like TERM 2932 2771834 - 2771816 - R 77 -4.5 -4.93595 | overlap 2771819 ACAAAAATTTAAAAA TATGCGC GAAAA GCGCTTA AAAGGTGGGATTTTT Sde_2178 2772229 - 2771888 - | hypothetical protein Sde_2179 2773962 - 2772235 - | flagellar basal-body rod protein FlgC TERM 2933 2774038 - 2774026 - R 71 -4.8 -4.68593 | TCGATTATGCAAAAA CGCA TAAGC TGCG CCTTACTGAATTTTA Sde_2180 2774430 - 2774041 - | flagellar basal-body rod protein FlgB Sde_2181 2774621 - 2775967 + | MCP methyltransferase, CheR-type TERM 2934 2776162 - 2776146 - g 71 -10.1 -3.23979 | overlap 2776141 TGAAGAGCAATTCAA GCAGACC AAG GGCCTGC TAACAGACAAGCGCT TERM 2935 2776645 - 2776629 - g 88 -5.9 -5.54079 | TGAAAAATCAAAAAA TATAGAC GAG GCCTATA ACAACCTTTCCAGTA Sde_2182 2775964 - 2777994 + | CheW-like protein TERM 2936 2778406 - 2778396 - g 71 -6.8 -4.05877 | TATCACATCAAACAA TGCC AAA GGCA TGGATCTAGCGTTTA Sde_2183 2778097 - 2779788 + | transcriptional regulators-like Sde_2184 2780278 - 2779847 - | flagellar protein FliJ, putative fliI 2781647 - 2780271 - | flagellum-specific ATP synthase Sde_2186 2782683 - 2781634 - | flagellar biosynthesis/type III secretory pathway protein-like TERM 2937 2782458 - 2782472 + g 72 -2.8 -5.00884 | CAAAACCCTCTTCTT TGGC CTCGGCA GCCA TTTTTTGAAGCGCAT fliG 2783823 - 2782783 - | flagellar motor switch protein G TERM 2938 2783752 - 2783768 + g 74 -5.9 -4.56597 | AAGCAATATTGCAGC TTGATCG ACG CGATTAA TTTTTACCGCAGGGG fliF 2785490 - 2783820 - | flagellar MS-ring protein TERM 2939 2785085 - 2785099 + g 79 -11.4 -3.38088 | ATTCACCTTCTATGC CGCGCT TGT AGCGCG TTGCTTCCATAAATT Sde_2189 2785968 - 2785603 - | hypothetical protein TERM 2940 2786330 - 2786299 - R 93 -11 -4.09243 | opp_overlap 2786305, overlap 2786301 2786305 TACACTGCCCCAAAA TACAAATGGCCTGA CAAG TCAGACCATTTGAA GAGCTAAAAATATTT TERM 2941 2786328 - 2786301 - R 100 -13.6 -3.6422 | opp_overlap 2786305, overlap 2786299 2786305 CACTGCCCCAAAATA CAAATGGCCTGA CAAG TCAGACCATTTG AAGAGCTAAAAATAT TERM 2942 2786324 - 2786305 - R 87 -8.6 -4.45168 | opp_overlap 2786305, overlap 2786301 2786299 GCCCCAAAATACAAA TGGCCTGA CAAG TCAGACCA TTTGAAGAGCTAAAA Sde_2190 2786526 - 2786350 - | hypothetical protein Sde_2191 2788341 - 2786848 - | diguanylate cyclase/phosphodiesterase TERM 2943 2787323 - 2787353 + g 70 -10.5 -2.57132 | overlap 2787322 TGTACGCCCTGCCTG TGTTGCTTGGCCG CATGA CGGCTAAGTAACG ATTCTGCCAGCGGGA Sde_2192 2789662 - 2788334 - | PAS/PAC sensor signal transduction histidine kinase TERM 2944 2788909 - 2788874 - G 80 -9.8 -3.85698 | gap 1, opp_overlap 2788882 CTCGCTTTTTACAAA CAGCATCATGTCGCGCA CTG TGCGCTCCAT-ATGCTG TAAACGGCCCAATAA TERM 2945 2789543 - 2789511 - G 72 -5.6 -4.5366 | gap 1, overlap 2789506 TTAAAAAATTGAAAA GCCGC-CTCCAACCT TTCT AGGTTAGATTGCGAC GTAGGCAATTTTGCC Sde_2193 2790200 - 2790472 + | hypothetical protein TERM 2946 2790503 - 2790530 + T 75 -8.5 -3.80625 | AGCTCTGAGCATTAT GCGAACCCA TTAAAATATT TGGGTTCGC TTTCGCTTGTAAGCA TERM 2947 2790574 - 2790552 - T 74 -4.8 -4.78572 | overlap 2790557 TTGTAAGCAATAAAA TACTAGCTGC GCT GCAACCCGTA TTTACGCATTTTCTC Sde_2194 2791993 - 2790554 - | response regulator receiver domain-containing protein TERM 2948 2790978 - 2790992 + g 72 -8.6 -3.78312 | overlap 2790990 ATGGAGCCACGGTGT TCGCTT TCT AAGCGA TTTACTAACTCGTTT TERM 2949 2791302 - 2791330 + g 74 -8.1 -3.96148 | opp_overlap 2791293, overlap 2791293 2791303 TCAAAACGCCCCGCT CGCGCGTTAATAG CCC CTGTAAACGCGCC TTTCTCATGCCCAAA TERM 2950 2791303 - 2791329 + g 78 -11.6 -2.97475 | opp_overlap 2791293, overlap 2791293 2791302 CAAAACGCCCCGCTC GCGCGTTAATAG CCC CTGTAAACGCGC CTTTCTCATGCCCAA Sde_2195 2792596 - 2792336 - | tryptophanyl-tRNA synthetase Sde_2196 2793093 - 2792701 - | putative flagellar protein TERM 2951 2793345 - 2793370 + r 100 -14.1 -4.08394 | opp_overlap 2793342 2793341 2793345 2793349 ATAGATATAAATGCA CATAGGGTGCC AATT GGTACCCTATG TTTTACAAAGAATGT TERM 2952 2793370 - 2793345 - R 83 -11.9 -2.75389 | opp_overlap 2793345, overlap 2793342 2793341 2793349 ATAGATATAAATGCA CATAGGGTGCC AATT GGTACCCTATG TTTTACAAAGAATGT Sde_2197 2793789 - 2793385 - | cyclic nucleotide-binding domain-containing protein Sde_2198 2796054 - 2793976 - | flagellar capping protein-like TERM 2953 2795441 - 2795457 + g 78 -5.1 -4.91429 | ATTTCTAGTTCATTC GCTGC ACCAGAA GCAGC TTTTATTTGCAATTT TERM 2954 2796162 - 2796183 + r 78 -10.1 -3.45118 | opp_overlap 2796157 2796158 CCTTCCACAAGTGTA GCCCAAACC CCGC GGCTTGGGC TTACTTGTAAGCTAG TERM 2955 2796276 - 2796254 - R 76 -6.9 -4.49939 | overlap 2796246 ATAGAATGCACAAAA GGCGCCAAG TTTAG CTAAGCGCC CAAAATACACCCCCT Sde_2199 2796709 - 2796311 - | bacitracin resistance protein BacA TERM 2956 2796761 - 2796730 - R 91 -10.2 -4.18762 | overlap 2796731 2796738 AATCCTCATTCAAAA TGGCAAAAGCAGGA TCTA TCCCACTTTTGCCC ACCTTCTATACGAAG TERM 2957 2796760 - 2796731 - R 100 -13.7 -3.10775 | overlap 2796730 2796738 ATCCTCATTCAAAAT GGCAAAAGCAGGA TCTA TCCCACTTTTGCC CACCTTCTATACGAA Sde_2200 2798574 - 2796811 - | flagellin FliC TERM 2958 2796857 - 2796880 + g 74 -11 -2.86164 | opp_overlap 2796861, overlap 2796866 CTAGCGTTAGCCTGA GCAAGCATCG CTTG CGAAGCTTGC TGTAGTACTTGCGCC TERM 2959 2798620 - 2798604 - H 75 -8.7 -3.62597 | TGTAGTTTCGAATAA CTAGCCG CAA CGACTAG CATGGCCTCAAACAA TERM 2960 2800078 - 2800091 + G 85 -6.7 -5.12068 | AAAATAAGTTTATTG TTGGC TATA GCCAA TTTTTATTAGCTCTC Sde_2201 2799174 - 2800802 + | Tfp pilus assembly protein PilF-like TERM 2961 2800804 - 2800834 + T 100 -20 -2.92513 | opp_overlap 2800807 2800812, overlap 2800807 2800812 TATTTGGCCGTTAAG CAATTAAACCACCC TTT GGGTGGTTTAATTG TGTAATTCACATTCT TERM 2962 2800831 - 2800807 - T 100 -15.9 -3.33696 | opp_overlap 2800804 2800807 2800812, overlap 2800812 TTGGCCGTTAAGCAA TTAAACCACCC TTT GGGTGGTTTAA TTGTGTAATTCACAT TERM 2963 2800807 - 2800831 + T 100 -15.9 -3.60214 | opp_overlap 2800807 2800812, overlap 2800804 2800812 TTGGCCGTTAAGCAA TTAAACCACCC TTT GGGTGGTTTAA TTGTGTAATTCACAT TERM 2964 2800826 - 2800812 - T 100 -11.4 -4.00348 | opp_overlap 2800807 2800804 2800812, overlap 2800807 CGTTAAGCAATTAAA CCACCC TTT GGGTGG TTTAATTGTGTAATT TERM 2965 2800812 - 2800826 + T 100 -11.4 -4.05848 | opp_overlap 2800812 2800807, overlap 2800807 2800804 CGTTAAGCAATTAAA CCACCC TTT GGGTGG TTTAATTGTGTAATT Sde_2202 2802619 - 2800877 - | adenylate kinase TERM 2966 2802751 - 2802765 + r 74 -4.2 -5.06414 | opp_overlap 2802763 AAAACCGACTTTTTA CGGCTT TTA AAGGCG TTTTTATTAAAAGGC Sde_2203 2804818 - 2803220 - | flagellin-like protein TERM 2967 2804290 - 2804316 + g 72 -5.3 -4.67168 | gap 1 TTTTGCCAGAATCAC TAGCG-GCAATA TGAG TATTGTTCGCTA TTTTTACAAATTTTT Sde_2204 2807593 - 2804831 - | hypothetical protein Sde_2205 2808559 - 2807603 - | RelA/SpoT protein flgI 2809699 - 2808560 - | flagellar basal body P-ring protein TERM 2968 2809128 - 2809099 - G 70 -2.1 -5.00138 | gap 1, overlap 2809103 2809122 TATGTAAATTAAAAA CAATGCGAT-CGTC ACC GCCAAATCGCGTTG CTACTGCGCGCTCCA Sde_2207 2810405 - 2809713 - | Hpt sensor hybrid histidine kinase flgG 2811221 - 2810436 - | flagellar basal body rod protein FlgG TERM 2969 2810626 - 2810638 + g 72 -9.1 -3.54543 | CCTTGAATGGGGTTA CCGCT TGA AGCGG TTTCGAGAAATAAAT flgF 2812030 - 2811281 - | flagellar basal body rod protein FlgF TERM 2970 2811684 - 2811667 - G 75 -11.3 -3.03441 | overlap 2811678 CACCATTGCCTAACA CCGGCAA GCCA TTGCCGG TACGCAAAATACCTA TERM 2971 2812188 - 2812145 - R 75 -10.5 -2.73721 | opp_overlap 2812159 AGTAATTGCTAATGA GTAGCCGCTAATCACTAGT GAAGTT ACTAGTGATTAGCGATTAA AAACTATAGATTGAA Sde_2210 2814618 - 2812204 - | ribonuclease III TERM 2972 2813581 - 2813566 - G 72 -4.7 -4.66537 | TGCGGGAATAGAAAA TGGCA CGATAT TGCCA TCAGGACCTACAATA TERM 2973 2814371 - 2814356 - G 95 -2.6 -5.88565 | CTCACAACAAAAAAA CCATTA CCGT TAATAG CAAGATCCAGCTCGT Sde_2211 2815374 - 2814658 - | flagellar basal-body rod modification protein FlgD TERM 2974 2814757 - 2814780 + g 72 -5.3 -4.56133 | overlap 2814758 AGTAACGCTGTTTAC ATTGGCACT AAGTGC AGTGCCAAG TTTTACTTCTTCACC TERM 2975 2814758 - 2814779 + g 70 -8.8 -3.32957 | overlap 2814757 GTAACGCTGTTTACA TTGGCACT AAGTGC AGTGCCAA GTTTTACTTCTTCAC TERM 2976 2814832 - 2814844 + g 71 -3.3 -4.83722 | AAACCGATAAGTGCC CGGTG GTA TGCCG TTTTCTTGTGATGTT flgC 2815867 - 2815433 - | flagellar basal body rod protein FlgC Sde_2213 2816299 - 2815895 - | GTP-binding protein LepA TERM 2977 2816058 - 2816075 + g 72 -5.5 -4.38712 | overlap 2816061 GAACGGTACAAAGGT TCACCGC TAAA GCGGTTA TTTTCTGCCGCTCCA TERM 2978 2816061 - 2816072 + g 74 -7.2 -4.31397 | overlap 2816058 CGGTACAAAGGTTCA CCGC TAAA GCGG TTATTTTCTGCCGCT TERM 2979 2816569 - 2816542 - R 100 -13.4 -5.13354 | GGTACAAAAAAGAAA GCCGCAACCAAC ATCT GCTGGTAGCGGC CAAAGAAAAGAATTT Sde_2214 2817469 - 2816612 - | MCP methyltransferase, CheR-type TERM 2980 2816873 - 2816887 + g 79 -4.2 -5.10154 | TCTGCTTTTTATGCT TGGCTT TAC ACGCCA TTTTTCCTTTTCAAT TERM 2981 2817130 - 2817140 + g 81 -8.2 -4.40963 | opp_overlap 2817121 2817116, overlap 2817116 2817127 ACCAAATGCGCATGC GCCC ATT GGGC TTATTTTTAAACCAT Sde_2215 2818481 - 2817531 - | putative chemotaxis protein TERM 2982 2818186 - 2818173 - G 73 -4.5 -4.86621 | ACCCTTAACCAAAAA GCCCT GTGT AGAGC GATTATATTCTGTGA Sde_2216 2818634 - 2819365 + | flagellar basal body P-ring biosynthesis protein-like Sde_2217 2819609 - 2819926 + | putative anti-sigma-28 factor, FlgM Sde_2218 2820088 - 2820561 + | putative flagella synthesis protein FlgN Sde_2219 2821194 - 2820538 - | L-aspartate oxidase Sde_2220 2821877 - 2821191 - | hypothetical protein TERM 2983 2821464 - 2821451 - G 71 -3.8 -4.83615 | opp_overlap 2821440 TACGCCTTACAAAAA GGGT TTGATC ACCC GTTGCCACACCACTA Sde_2221 2822871 - 2821882 - | hypothetical protein TERM 2984 2822637 - 2822651 + g 80 -12.8 -3.05816 | AGTGTGGGTTCATCT CCGGCG CGC CGCCGG TTAAATCCAGAGTGG Sde_2222 2823373 - 2824110 + | hypothetical protein Sde_2223 2825473 - 2824187 - | hypothetical protein TERM 2985 2824510 - 2824493 - G 80 -5.5 -5.00616 | GTCCCGCTCAAAAAA TGGCTGT GCAT ACTGCCA GGCATCCCCAAACAA Sde_2224 2827978 - 2825516 - | diguanylate cyclase/phosphodiesterase TERM 2986 2827379 - 2827394 + g 73 -4.6 -4.78326 | overlap 2827380 CGAAAGTCGCTGCTC GCCAGG GCTA CCTGGG TTTATTTGTTTAACC TERM 2987 2828030 - 2828049 + r 70 -7.8 -3.66908 | TATAGTTTACATTCT GGCCGC TAACCCCT GCGGCC TTGATTTTGGAGAAA Sde_2225 2829096 - 2828164 - | pyridoxamine 5'-phosphate oxidase TERM 2988 2829034 - 2829046 + g 72 -4.7 -4.67256 | opp_overlap 2829020 AGCCTTACCCACATT GCGGC GAA GACGC TTTTGTAGTTTGTTG Sde_2226 2829413 - 2830249 + | hypothetical protein TERM 2989 2830346 - 2830329 - f 79 -7.7 -4.2558 | CATTTGTGAGTAAAA TGCTGCA TCCA CGCAGCA ATAAAAGGTAAGCAC Sde_2227 2830363 - 2831673 + | aminotransferase TERM 2990 2831704 - 2831677 - T 89 -11.4 -3.46088 | opp_overlap 2831684, overlap 2831684 ACAGCTCAGTAAACA CAAAAAAGGGCC AAAA GGCCCTTTTTTT CAGTCCACTTCGCTA TERM 2991 2831697 - 2831684 - T 100 -9.5 -5.5762 | opp_overlap 2831684, overlap 2831677 AGTAAACACAAAAAA GGGCC AAAA GGCCC TTTTTTTCAGTCCAC TERM 2992 2831684 - 2831697 + T 100 -9.5 -5.47218 | opp_overlap 2831677 2831684 AGTAAACACAAAAAA GGGCC AAAA GGCCC TTTTTTTCAGTCCAC Sde_2228 2832726 - 2831722 - | tryptophanyl-tRNA synthetase Sde_2229 2833822 - 2832761 - | hypothetical protein Sde_2230 2835007 - 2833937 - | hypothetical protein TERM 2993 2834549 - 2834510 - G 86 -8.8 -4.51378 | gap 1, opp_overlap 2834512 AGGGATACGAGAAAA TAATGGCGACTGAA-GT AAAGCAG ACATCCAGTCGCCACTA TCGTCACTAAGCTCT TERM 2994 2835032 - 2835012 - R 81 -11.9 -2.53343 | overlap 2835011 ACAGTGATCATGAAT TGCTCCCCT TAC AGGGGAACA GTGTGACGTATTTAT TERM 2995 2835117 - 2835081 - R 79 -8.2 -4.17023 | gap 1 GGAATCACGTGAAAA TGTAGATTGATAGC-GC AATC ACAGCAATCAATCTACA TCAAAAGCCAATCAG Sde_2231 2836482 - 2835184 - | putative aminopeptidase 2 TERM 2996 2835726 - 2835742 + g 74 -7.3 -4.31293 | overlap 2835732 TGGTATAGGTGGTAT CAGCTTG GAT TAAGCTG TTTATTCCTATATAG Sde_2232 2837298 - 2836501 - | undecaprenyl pyrophosphate phosphatase TERM 2997 2836761 - 2836745 - G 79 -4.4 -5.1971 | gap 1 AGTAAAAATGAAAAA CG-AGCG GCGT CGCTTCG GCCAAAACCAAGTAA Sde_2233 2838041 - 2837334 - | peptidase TERM 2998 2838112 - 2838138 + r 100 -16.7 -5.01732 | opp_overlap 2838112 CACCAAAACAAAAAA TCCCCCGTAGA AAAGC TCTACGGGGGA TTTTTTACAAGCATT TERM 2999 2838138 - 2838112 - R 100 -17.4 -5.83211 | opp_overlap 2838112 CACCAAAACAAAAAA TCCCCCGTAGAA AAG CTCTACGGGGGA TTTTTTACAAGCATT Sde_2234 2839082 - 2838192 - | hypothetical protein TERM 3000 2838253 - 2838275 + g 78 -4.8 -5.01732 | opp_overlap 2838257, overlap 2838238 GCTGGTGCTTTTTTA GCAACTGC TTTCTTC GCAGGTGC TTTTTTAGCAGGCTT TERM 3001 2838367 - 2838389 + g 72 -2.6 -5.00616 | overlap 2838364 TTTGCTTTTTTAGCA GCAGCGGC AGCTTTA GCCTTTGC TTTTTTAGCAGCAGC TERM 3002 2838664 - 2838674 + g 71 -6.8 -4.12738 | GCTTCAGCAGTAGCA GCCA ACT TGGC TTTCATTTCATCTAC TERM 3003 2838971 - 2838994 + g 82 -7.5 -4.60889 | overlap 2838972 CGGTTTGAGCTTTGG TTACTGCTG GATCTG CAGCAGTAG TTTTTGGAGCTGCTT TERM 3004 2838972 - 2838993 + g 70 -8.8 -3.3581 | overlap 2838971 GGTTTGAGCTTTGGT TACTGCTG GATCTG CAGCAGTA GTTTTTGGAGCTGCT TERM 3005 2839867 - 2839838 - R 100 -11.5 -4.06055 | gap 1, opp_overlap 2839860, overlap 2839841 2839857 AGGCGGGAAAGGAAA TGAGGTGCAACGGC GAA ACCGCTGCACC-CA GAGCACTACTTTTTC TERM 3006 2839865 - 2839841 - R 100 -14.3 -3.0693 | opp_overlap 2839860, overlap 2839838 2839857 CGGGAAAGGAAATGA GGTGCAACGGC GAA ACCGCTGCACC CAGAGCACTACTTTT Sde_2235 2840529 - 2839873 - | adenylate kinase TERM 3007 2839955 - 2839977 + g 75 -2.7 -5.252 | gap 1, overlap 2839950 GAGTACACTGGCAGG CTAT-CGCTG CTTT CTGCGGATAG TTTTTTATAAAAATC Sde_2236 2841116 - 2841445 + | hypothetical protein Sde_2237 2842335 - 2841517 - | MazG family protein TERM 3008 2841565 - 2841583 + g 72 -8.2 -3.81557 | GCTTTCCATTTCTTC TATTGGCG TTT CGCTAATA TCTTTCTTTGCAGCC Sde_2238 2844586 - 2842346 - | GTP diphosphokinase TERM 3009 2844452 - 2844475 + g 70 -2.4 -5.06451 | overlap 2844453 2844454 TTCAACTTCGATTAC TTTTTCGCAT GCTA ATGCGAGAGC TTTTTTGCCATCATC TERM 3010 2844601 - 2844615 + r 75 -7.2 -4.37886 | TATTCGTTTCTTTTA TTTCTG CGG CAGAAA TTTTCTAGCGGCTGC cysM 2845562 - 2844672 - | cysteine synthase B TERM 3011 2845748 - 2845760 + H 80 -9.1 -3.9392 | opp_overlap 2845737 AAAGGGGTATCGCCA CCCGA AAA TCGGG TTATTTCCCCTAGGC TERM 3012 2846217 - 2846229 + G 72 -9.1 -3.54511 | CGGCCAATGCTTTGC TCGCC ACA GGCGA TTATCGTTCGATTGT TERM 3013 2847178 - 2847136 - g 76 -8.5 -4.14739 | gap 1, opp_overlap 2847137 2847164, overlap 2847137 CGATGTACCCGAAAA CCTGCTTGGCGACCCGCTTC GCTT GAAGCAGGT-GCTAAGCAAT CTGGTTTCCAACGCC TERM 3014 2847177 - 2847137 - g 78 -12 -3.08522 | gap 1, opp_overlap 2847137 2847164, overlap 2847136 GATGTACCCGAAAAC CTGCTTGGCGACCCGCTTC GCTT GAAGCAGGT-GCTAAGCAA TCTGGTTTCCAACGC TERM 3015 2847137 - 2847177 + G 70 -9.8 -3.00525 | gap 1, opp_overlap 2847137 2847136, overlap 2847164 GATGTACCCGAAAAC CTGCTTGGCGACCCGCTTC GCTT GAAGCAGGT-GCTAAGCAA TCTGGTTTCCAACGC Sde_2240 2845997 - 2848825 + | sensor/response regulator hybrid Sde_2241 2849543 - 2848836 - | DNA replication and repair protein RecO era 2850460 - 2849564 - | GTP-binding protein Era Sde_2243 2851189 - 2850509 - | RNAse III Sde_2244 2851589 - 2851176 - | hypothetical protein Sde_2245 2852501 - 2851635 - | signal peptidase I TERM 3016 2851852 - 2851862 + g 72 -3.2 -5.05782 | GGCGTAGAGCAATTA CGCA TGA TGTG TTTTTTACCATCGAT TERM 3017 2852558 - 2852535 - R 79 -11 -2.91582 | opp_overlap 2852538, overlap 2852538 TAGTTTACGTAGACA CAAGCCGAGC CGAA GCCCGACTTG CATAATGGCGTGAGG Sde_2246 2854373 - 2852574 - | GTP-binding protein LepA TERM 3018 2853062 - 2853074 + g 72 -4.9 -4.56597 | CAACCTGACCACCCA GATAT TGC ATATC TTTTTGCACACCGCG TERM 3019 2853221 - 2853234 + g 70 -2.3 -5.04175 | GGTTATCTACGTACA CAACG CTAC CGTCG TTTTTCTCTACTTCA TERM 3020 2854491 - 2854459 - R 83 -12 -2.64794 | CGCAAGTCTACAGTA TTTGGAAGGCGCAC GCTAT GCGCGCCCTCCAGA GGTGATAAGCAAGTG Sde_2247 2855901 - 2854507 - | ATPase TERM 3021 2854994 - 2855007 + g 71 -3.7 -4.82901 | opp_overlap 2855003 ACAATGACATCACCG GGCTG CAAA CCGCC TTTTTCTGCGGGCGA Sde_2248 2856521 - 2856051 - | positive regulator for alginate biosynthesis MucC TERM 3022 2856296 - 2856276 - G 71 -7.6 -3.91858 | gap 1, opp_overlap 2856277, overlap 2856277 TACATAGGCCATAAA CGCGCCGTT AATT AACG-CGCG CTCTTCAATACCTAT Sde_2249 2857686 - 2856601 - | putative sigma E regulatory protein, MucB/RseB TERM 3023 2857191 - 2857211 + g 71 -6.8 -4.04174 | opp_overlap 2857191 GCCCCTCGGTAATAA CGGCCTTG GTCAA CAAGCCCG TTTGCTTATCTACAC TERM 3024 2857507 - 2857493 - G 70 -10 -2.93901 | overlap 2857479 2857506 ACGCCATCAATTACA GCGTGT ACA ACACGC AACATATCGATGGTG TERM 3025 2857656 - 2857625 - G 71 -10.2 -2.62184 | gap 1, overlap 2857652 GTTTTGTCTAGAGCA CTGACTGCAG-GGGA CAC CCCCACTACAGCCAG CACAATCGCTAGCGA Sde_2250 2858368 - 2857694 - | secretion protein HlyD TERM 3026 2858436 - 2858455 + r 73 -7.2 -4.11692 | opp_overlap 2858436 TTCAGAGACTACCAA GCACGAAT AAGT ATTTGTGC TTTTGGCAATGCCTG algU 2859150 - 2858569 - | RNA polymerase sigma factor AlgU TERM 3027 2858876 - 2858852 - G 73 -11.3 -2.65815 | opp_overlap 2858872 TCTACATCTACATCA CTCGATGGCGG CCT CCGCCCGCGAG ATACTAAATAGTTTT TERM 3028 2858964 - 2858932 - G 75 -6.3 -4.431 | overlap 2858960 GATCCACGTATAAAA CGCGCTATCGCCA CGGAAAT TGCCAATAGCACG ATAAGCCTTAATAAA TERM 3029 2859106 - 2859069 - G 71 -7.8 -3.98378 | gap 1, opp_overlap 2859080, overlap 2859080 GATATTTAATAACAA GCATGT-CAAAAGCGCG TTTAT CGCCCTTCTGCACACGC AACACAAGTTGATGA Sde_2252 2859586 - 2861253 + | L-aspartate oxidase Sde_2253 2861778 - 2861275 - | hypothetical protein Sde_2254 2862072 - 2861827 - | response regulator receiver domain-containing protein Sde_2255 2862297 - 2863265 + | TonB-dependent receptor Sde_2256 2863297 - 2864133 + | putative signal transduction protein Sde_2257 2865692 - 2864235 - | succinate semialdehyde dehydrogenase TERM 3030 2864919 - 2864907 - G 75 -6.2 -4.52143 | overlap 2864908 GTCAAACACAATAAA CGGC GCATT GCCG CCCAGCTCCATGGAG TERM 3031 2864923 - 2864936 + g 76 -2.3 -5.32944 | overlap 2864924 GGCGCATTGCCGCCC AGCTC CATG GAGCA TTTTTTAATTGTGGC Sde_2258 2866358 - 2865720 - | pyridoxamine 5'-phosphate oxidase Sde_2259 2866451 - 2867119 + | molybdenum cofactor guanylyltransferase TERM 3032 2867335 - 2867320 - g 93 -9 -4.81249 | GCTTAAATCTAAAAA CAGGGT AAGC ACCCTG CCAGATTTCAATCAA TERM 3033 2867941 - 2867916 - g 82 -3.2 -5.59655 | gap 1, overlap 2867919 2867920 2867921 TAAAGCAAGAAAAAA GAAGC-CGCCC TATTC AGGCGAGCTAC CAGCACACACGGCCA TERM 3034 2867938 - 2867919 - g 71 -3.5 -4.82661 | gap 1, overlap 2867916 2867920 2867921 AGCAAGAAAAAAGAA GC-CGCCC TATTC AGGCGAGC TACCAGCACACACGG Sde_2260 2867165 - 2868064 + | hypothetical protein Sde_2261 2870528 - 2868030 - | hypothetical protein TERM 3035 2869334 - 2869371 + g 75 -2.7 -5.22794 | gap 2, opp_overlap 2869300, overlap 2869337 2869369 CCACACCGGTGTATG TGCCAGCCGCCACGCGA ATCTCA TCGCGCGGAG-CT-GCA TTTTTTAATGCTTCT TERM 3036 2870507 - 2870492 - G 77 -9 -3.95183 | overlap 2870489 CTAGACAGATAAGAA CAAGGC TCCT GCCTTG AATTGACTTTATTCG TERM 3037 2871940 - 2871961 + G 79 -4.4 -5.22039 | gap 1, overlap 2871939 TGCCGCACTGGTAAC CGCTATCGC AATTG GCGGT-GCG TTTTTTAACTTTCAC Sde_2262 2871185 - 2872660 + | hypothetical protein Sde_2263 2872665 - 2873312 + | response regulator receiver domain-containing protein TERM 3038 2874476 - 2874456 - g 71 -7.5 -3.87075 | AGCAGGCGGCATAAA CCCGGGC TACTACG GCCCAGG TGCATCAGGTAATGT Sde_2264 2873857 - 2875269 + | histidine kinase TERM 3039 2875310 - 2875288 - f 71 -9.1 -3.35073 | overlap 2875289 ATTACCGCTAATTAA CGGGCAAGG TTCCC CCTTGCCCT TAACCAAACCTTTTT TERM 3040 2875309 - 2875289 - f 88 -12.6 -2.60723 | overlap 2875288 TTACCGCTAATTAAC GGGCAAGG TTCCC CCTTGCCC TTAACCAAACCTTTT Sde_2265 2875364 - 2876377 + | 2-isopropylmalate synthase TERM 3041 2876689 - 2876708 + G 71 -3.6 -4.90079 | opp_overlap 2876684 2876687 TATTCGACAACATTG CACTTG CAGTGGAT CAAGTG TTTTGTTCTTGGCCT Sde_2266 2876397 - 2878160 + | regulatory proteins, AsnC/Lrp Sde_2267 2878238 - 2879467 + | hypothetical protein TERM 3042 2879549 - 2879570 + F 100 -12.3 -4.08578 | TAGTAGCGCATCTCT CGGGAGGAC GCCA GTCCTCTCG TTTCTAATTGCCTTT Sde_2268 2879749 - 2881020 + | membrane-fusion protein TERM 3043 2881950 - 2881927 - g 78 -5.2 -4.91852 | overlap 2881928 2881930 TTGAGCAAAAACAAA CCACCATGCC CGAA GGCATGGAAA TAAGCTACTGGGATG TERM 3044 2881947 - 2881930 - g 79 -11.3 -3.32572 | overlap 2881928 2881927 AGCAAAAACAAACCA CCATGCC CGAA GGCATGG AAATAAGCTACTGGG TERM 3045 2882776 - 2882764 - g 73 -10.5 -3.07537 | overlap 2882761 ATGTACAAACAATCA CGGGC CAT GCCCG CAGCCTTAAAGAGAA TERM 3046 2883500 - 2883484 - g 70 -9.5 -3.05066 | AACAAGCCGCTAATA TGACTGT TTT ACAGTCA GACTTAGAAAAGTAC Sde_2269 2881017 - 2884136 + | RND family efflux transporter TERM 3047 2884188 - 2884170 - f 80 -10.3 -3.41209 | overlap 2884168 2884166 AACACAAAGAAGAGA TAGGCGC CACTC GCGCCTA GTACAAAATCATTAA TERM 3048 2884238 - 2884223 - f 71 -3.2 -5.03994 | opp_overlap 2884223 CGTGATATACAAAAA GTGTGC ACAA GCAAAC AGTTTTTGGCGCGTA TERM 3049 2884406 - 2884422 + F 100 -13.7 -5.28176 | GCAAACATGATTTTG GGGGAGC TAT GCTCCCC TTTTTTATGCCTGAA TERM 3050 2885542 - 2885512 - f 100 -13.3 -3.07013 | gap 1, opp_overlap 2885514, overlap 2885514 2885517 CATGTTTGCAAGACA CAGCACGCGGGCCC AATA GGGCCCGCGCA-TG CTATATGGAGTACAC TERM 3051 2885514 - 2885543 + F 83 -12.2 -2.89564 | gap 2, opp_overlap 2885514 2885512 2885517 TGTTTGCAAGACACA GCA--CGCGGGCCC AATA GGGCCCGCGCATGC TATATGGAGTACACA TERM 3052 2885541 - 2885514 - f 93 -12.6 -3.09273 | opp_overlap 2885514, overlap 2885512 2885517 TGTTTGCAAGACACA GCACGCGGGCCC AATA GGGCCCGCGCAT GCTATATGGAGTACA TERM 3053 2885538 - 2885517 - f 100 -18.7 -2.75975 | opp_overlap 2885514, overlap 2885514 2885512 TTGCAAGACACAGCA CGCGGGCCC AATA GGGCCCGCG CATGCTATATGGAGT Sde_2270 2885748 - 2886014 + | hypothetical protein TERM 3054 2887002 - 2886976 - g 71 -7.2 -4.04174 | opp_overlap 2886979, overlap 2886971 GGGTAGATAACCAAA CCAGCAGCGCAG AGC CTACGATGCTTG GCTGGGTGGTGTGCT Sde_2271 2886051 - 2887481 + | hypothetical protein TERM 3055 2887525 - 2887491 - f 100 -7.9 -5.63103 | gap 1, overlap 2887494 2887496 TTTTAATTAAAAAAA TAATA-GCGCCACCCC TATG AGGGCGGCGCACACTA ATTGCTAGTTTTATT TERM 3056 2887520 - 2887494 - f 100 -8.7 -4.88485 | gap 1, overlap 2887491 2887496 TAATTAAAAAAATAA TAGCGCCACCCC TATG AGGGCGGCGC-A CACTAATTGCTAGTT TERM 3057 2887519 - 2887496 - f 100 -13.8 -4.01925 | overlap 2887494 2887491 ATTAAAAAAATAATA GCGCCACCCC TATG AGGGCGGCGC ACACTAATTGCTAGT Sde_2272 2887712 - 2890087 + | cellobiohydrolase A (1 4-beta-cellobiosidase A)-like TERM 3058 2890100 - 2890131 + F 100 -13.8 -4.48743 | overlap 2890101 TAGGTTAGTAGGTAG CTACGCCACAGAGC CATC GCTTTGTGGCGTAC TTTATTTCCCATTTT TERM 3059 2890101 - 2890130 + F 100 -17.3 -3.27619 | overlap 2890100 AGGTTAGTAGGTAGC TACGCCACAGAGC CATC GCTTTGTGGCGTA CTTTATTTCCCATTT TERM 3060 2890149 - 2890181 + F 100 -15 -3.54297 | TATTTCCCATTTTAA GCGGGGTACTAGAT AAACA ATCTACTACCCCGC TTCTAGTTAATCGAT TERM 3061 2890472 - 2890459 - g 73 -2.5 -5.1675 | opp_overlap 2890459 TGATGTAGGAAAAAA TAAAA TTGT TTTTA TGTCTAACAGGCATA TERM 3062 2891315 - 2891299 - g 72 -8.7 -3.66666 | TGGAAAAGTGCTAAA CGAGCTT TTC AAGCCCG TTCACGGCAATTCAG Sde_2273 2890211 - 2891347 + | hypothetical protein TERM 3063 2891364 - 2891387 + T 100 -8.9 -5.79526 | opp_overlap 2891364 2891363 2891366, overlap 2891360 AAACTATAGACGAAC TACGCAGGT TCTTTT GCCTGCGTA TTTTTTTTGCGGTAT Sde_2274 2892541 - 2891363 - | AraC family transcriptional regulator TERM 3064 2892756 - 2892786 + r 71 -4.7 -4.65032 | opp_overlap 2892756 2892752 2892765 AAGGCCCATAATATA GTGCTAAACCAGC AATTG GCTGCTCTAGTAC TTTATTTATAGTTTC Sde_2275 2894009 - 2892792 - | cellulose-binding family II protein Sde_2276 2894789 - 2894049 - | hypothetical protein TERM 3065 2895402 - 2895413 + G 73 -2.2 -5.10064 | TACAGCGCGCTGCTC GTCA CGTC TGGC TTTTTGTGTGTTGCG Sde_2277 2895135 - 2896607 + | nitrate transporter TERM 3066 2896613 - 2896640 + F 72 -7.6 -3.85527 | opp_overlap 2896611, overlap 2896618 AGTAAGTTAATATGC GCGGGGGGCGAT TAAG GTCGCCCTTCTC TTCTCTTCTCTTCTC TERM 3067 2896618 - 2896635 + F 78 -9.1 -3.85527 | opp_overlap 2896611, overlap 2896613 GTTAATATGCGCGGG GGGCGAT TAAG GTCGCCC TTCTCTTCTCTTCTC TERM 3068 2897345 - 2897334 - g 71 -7.2 -4.18018 | GGTTCCCAGCTAAAA CCGC TGGT GCGG CACAAGGCATATACG Sde_2278 2896925 - 2898415 + | cellulose-binding family II protein TERM 3069 2898428 - 2898450 + F 100 -13.5 -5.58454 | opp_overlap 2898431 TAACTGCAGTATTAC GAAGGTGCC CTAGC GGCACCTTC TTTTTTTACTATCGC TERM 3070 2898447 - 2898431 - f 72 -9.4 -3.23216 | opp_overlap 2898428 CTGCAGTATTACGAA GGTGCC CTAGC GGCACC TTCTTTTTTTACTAT TERM 3071 2898705 - 2898719 + G 72 -4.9 -4.59853 | opp_overlap 2898705, overlap 2898706 AAACAGGCAAGCCAA TCCGC TATTT GCGGG TTTTTAACAGATTAC TERM 3072 2899440 - 2899417 - g 81 -8.2 -4.43477 | gap 1 CCTATGTAATGAAAA CGCCGTCGATA AAT TA-CGACGACG ACCCCGCCTACATAG Sde_2279 2898519 - 2900243 + | serine/threonine protein kinase TERM 3073 2901059 - 2901049 - g 71 -6.8 -4.15366 | ATTTAAAGAAGTAAA TGCC GAA GGCA AAACCATTGTTATAG Sde_2280 2900483 - 2901184 + | ABC transporter, ATP-binding protein TERM 3074 2902349 - 2902359 + G 74 -6.8 -4.28994 | AAACACAGCCTTTAT TGCC CTA GGCA TTTTAGTGGGTGCTG Sde_2281 2901189 - 2902448 + | ABC transporter, permease protein, putative TERM 3075 2903059 - 2903074 + G 72 -6 -4.41348 | opp_overlap 2903059 GCCGACTGGGCACAA CGCGAC ACAC GCCGCG TTTATTTCCCCAACA TERM 3076 2903282 - 2903263 - g 80 -7.2 -4.63542 | TATAACGCCCAAAAA GATTACAC TCGC GTGCAATC GCTGTTTACCGGCAT Sde_2282 2902450 - 2903706 + | ABC transporter, permease protein, putative Sde_2283 2903787 - 2904872 + | methyl-accepting chemotaxis sensory transducer TERM 3077 2904932 - 2904879 - T 89 -12.5 -2.84841 | opp_overlap 2904897, overlap 2904875 2904876 GGGCAATAAAATTCA GCGGCTAATTGCTAATCGCTAGCAG CTAG CAGCTAGCAGCTAGTAATTAGCGGC TAGCAATTAGCAAAC TERM 3078 2904897 - 2904921 + T 91 -12.9 -2.71731 | opp_overlap 2904875 2904879 2904876 GCTAATTGCTAATCG CTAGCAGCTAG CAG CTAGCAGCTAG TAATTAGCGGCTAGC Sde_2284 2906337 - 2904952 - | putative cation symporter TERM 3079 2905056 - 2905028 - G 80 -6.8 -4.67608 | gap 2 TACTGCAACATAAAA CCCGCAGACATGGC CGC GCCA-AT-TGCGGG GAATACACTAACCAT TERM 3080 2905373 - 2905363 - G 79 -4 -5.09762 | overlap 2905366 GTCTAAGAAATAAAA TAAG CCA CTTA ATACAGTAGCTAATA TERM 3081 2905587 - 2905561 - G 75 -2.9 -5.10933 | gap 1, opp_overlap 2905565, overlap 2905563 2905568 GTACTTAAAATAAAA CACAG-CAGCGC CATC GCGCAGGCTGTT AAACACTAAGGTACA TERM 3082 2906585 - 2906569 - H 71 -3 -4.95854 | GAAAAAAGCGAAAAA TAGCGT GAAAA ACACTA AAAATAACGCTTTTT Sde_2285 2906672 - 2907823 + | hypothetical protein TERM 3083 2907831 - 2907857 + F 100 -10.9 -4.68103 | opp_overlap 2907833, overlap 2907833 TTCGCTGATATAAAA AAGCCGCTCAA TATTT TTGAGCGGCTA TTTTATTCCGGTTAA TERM 3084 2907833 - 2907855 + F 100 -13.5 -3.9504 | opp_overlap 2907833, overlap 2907831 CGCTGATATAAAAAA GCCGCTCAA TATTT TTGAGCGGC TATTTTATTCCGGTT TERM 3085 2907855 - 2907833 - f 100 -13.5 -5.36441 | opp_overlap 2907831 2907833 CGCTGATATAAAAAA GCCGCTCAA TATTT TTGAGCGGC TATTTTATTCCGGTT Sde_2286 2908050 - 2908604 + | hypothetical protein TERM 3086 2908649 - 2908612 - T 100 -8.6 -4.93547 | opp_overlap 2908611 2908619 2908621, overlap 2908614 GTAACTAATTAAAAA TCGCTAATCGCTAGTA ACTAAA TATTAGCGATTAGCTA CTAGCTTTTAACAAT TERM 3087 2908647 - 2908614 - T 76 -11.2 -2.71941 | opp_overlap 2908611 2908619 2908621, overlap 2908612 AACTAATTAAAAATC GCTAATCGCTAGTA ACTAAA TATTAGCGATTAGC TACTAGCTTTTAACA Sde_2287 2910051 - 2908669 - | response regulator receiver domain-containing protein TERM 3088 2911899 - 2911911 + G 72 -2.7 -5.04385 | TGACGGTTCATACTC GTTAT TTA ATAGC TTTTTTACCAATATA Sde_2288 2910436 - 2913219 + | peptidase M24A TERM 3089 2913245 - 2913266 + T 100 -13.1 -5.24416 | opp_overlap 2913245 GTTAAATATAAAAAA GCGAACCTA GAAA TAGGTTCGC TTTTTATTGTGCTTC TERM 3090 2913266 - 2913245 - T 100 -13.1 -5.56264 | opp_overlap 2913245 GTTAAATATAAAAAA GCGAACCTA GAAA TAGGTTCGC TTTTTATTGTGCTTC TERM 3091 2913297 - 2913287 - T 70 -5.4 -4.56775 | opp_overlap 2913287, overlap 2913290 ATTGTGCTTCAAAAA CTAG CTG CTAG TTATTTACCAATTAG Sde_2289 2915945 - 2913333 - | outer membrane protein TERM 3092 2914915 - 2914900 - G 70 -2.4 -5.06103 | opp_overlap 2914900 ATAAGTGGTAAAAAA CCGTCG GTAT CGGCAG GGTTTAAACCATCGG TERM 3093 2916218 - 2916197 - R 100 -11.7 -5.71983 | opp_overlap 2916197 TTAATCACAAAAAAA GCCGATAAA TTTC TTTATCGGC TTTCAATAAGGTACT TERM 3094 2916197 - 2916218 + r 90 -11.7 -3.6608 | opp_overlap 2916197 TTAATCACAAAAAAA GCCGATAAA TTTC TTTATCGGC TTTCAATAAGGTACT Sde_2290 2916849 - 2916406 - | hypothetical protein TERM 3095 2916664 - 2916650 - G 70 -2.1 -4.93547 | CTAATTAAGTAAAAA GCTAA TAACG CTAGC CCCATTAATGCCGAA Sde_2291 2917918 - 2916932 - | NAD binding oxidoreductase Sde_2292 2918100 - 2918399 + | ArsR family transcriptional regulator Sde_2293 2918418 - 2918990 + | hypothetical protein Sde_2294 2918993 - 2919832 + | hypothetical protein Sde_2295 2919867 - 2920568 + | hypothetical protein TERM 3096 2920599 - 2920615 + F 95 -9.4 -4.41548 | CTATCCCTCTTAGCG CCCCCT CTATT AGGGGG TTTTCTCGCATGTAA Sde_2296 2920726 - 2921394 + | response regulator receiver domain-containing protein Sde_2297 2921387 - 2922727 + | Signal transduction histidine kinase-like TERM 3097 2922766 - 2922731 - T 74 -9.7 -3.12283 | opp_overlap 2922729, overlap 2922730 GAACTGATCTAAAAT TGCCGCTGTTGGAAC ACTCAA ATTCCATCAGCGGCT CGTACTTACACTAGT Sde_2298 2924473 - 2922812 - | 2-isopropylmalate synthase TERM 3098 2924769 - 2924748 - H 77 -4.5 -5.03715 | opp_overlap 2924748 2924749 2924751, overlap 2924749 ATTATTGCCAAAAAA CCACAAATA CATT TATTTGTGC TATTTTATGCCCAAT TERM 3099 2924768 - 2924749 - H 70 -8 -3.61506 | opp_overlap 2924749 2924748 2924751, overlap 2924748 TTATTGCCAAAAAAC CACAAATA CATT TATTTGTG CTATTTTATGCCCAA TERM 3100 2925278 - 2925261 - g 89 -9.1 -4.72272 | CGTTTGTATTAAAAA CCCCCGT GAAT ACAGGGG TGCTGCCCATAGGGT Sde_2299 2924825 - 2925295 + | AsnC family transcriptional regulator Sde_2300 2925549 - 2926532 + | dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like TERM 3101 2926571 - 2926542 - T 100 -8.7 -4.58644 | gap 1, opp_overlap 2926542 AACTAAGAAGTAAAA TCACTGGCTGGT TGTTCGT ACC-GCCAGTGA TTCAATAACACAGAG Sde_2301 2926841 - 2926671 - | hypothetical protein Sde_2302 2927259 - 2926906 - | hypothetical protein TERM 3102 2927384 - 2927360 - R 77 -4.9 -5.07053 | overlap 2927374 2927375 AATTAGTGTAAAAAA TGCGCTAAAAC ATA GGTGCAGCGCA CAAAATTACCGAATT Sde_2303 2928277 - 2927696 - | hypothetical protein TERM 3103 2928007 - 2927997 - G 81 -8.2 -4.37886 | overlap 2927998 2927999 TGATTTGGGACAAAA GCGG CAG CCGC GCCATTAAATACTTC Sde_2304 2928750 - 2928292 - | hypothetical protein Sde_2305 2929364 - 2928861 - | hypothetical protein Sde_2306 2929851 - 2929399 - | hypothetical protein Sde_2307 2931340 - 2930063 - | pectate lyase TERM 3104 2930146 - 2930157 + g 71 -3.6 -4.78597 | CCCCCTGCGTAGAGC CTGC TTCA GCGG TTTCTTTGTTATTGA TERM 3105 2932300 - 2932286 - H 85 -4.3 -5.51353 | CAAAAATAACAAAAA GGTAT AACCA ATACC TTGAAGTGATTTGCC TERM 3106 2933516 - 2933504 - g 71 -6.9 -4.06904 | overlap 2933497 2933512 GCAGTCAATCAGAAA GCCAG AAA CCGGC ATTCCGAGTGGAGAA Sde_2308 2932444 - 2933979 + | hypothetical protein TERM 3107 2933999 - 2934022 + T 91 -10.2 -4.24002 | opp_overlap 2934000, overlap 2934000 TGTTTTTATTACACA AGAGGCCGGC GGTT GCCGGTCTCG TTTTAACCTTTAAAG TERM 3108 2934021 - 2934000 - T 89 -11.5 -3.54475 | opp_overlap 2934000 2933999 GTTTTTATTACACAA GAGGCCGGC GGTT GCCGGTCTC GTTTTAACCTTTAAA TERM 3109 2934000 - 2934021 + T 100 -13.7 -3.13919 | opp_overlap 2934000, overlap 2933999 GTTTTTATTACACAA GAGGCCGGC GGTT GCCGGTCTC GTTTTAACCTTTAAA Sde_2309 2934464 - 2934045 - | hypothetical protein Sde_2310 2934972 - 2934523 - | hypothetical protein Sde_2311 2935602 - 2937920 + | hypothetical protein TERM 3110 2937927 - 2937960 + T 100 -14.7 -4.34866 | opp_overlap 2937930, overlap 2937930 2937958 GTTGATTAAAATATA AAAGGCAAGGCAGAG ATTT TTCTGCCTTGCCTTA TTTGTATTATTAGCT TERM 3111 2937957 - 2937930 - T 100 -15.7 -4.91977 | opp_overlap 2937930 2937927 GATTAAAATATAAAA GGCAAGGCAGA GATTTT TCTGCCTTGCC TTATTTGTATTATTA TERM 3112 2937930 - 2937957 + T 100 -16.4 -4.27463 | opp_overlap 2937930, overlap 2937927 GATTAAAATATAAAA GGCAAGGCAGAG ATTT TTCTGCCTTGCC TTATTTGTATTATTA Sde_2312 2938556 - 2938230 - | hypothetical protein Sde_2313 2939320 - 2940342 + | phospholipase/lecithinase/hemolysin-like TERM 3113 2940549 - 2940536 - T 75 -2.3 -5.24989 | GCAGACAGGAAAAAA GACAG CCAC CCGCC CTACTCCTAGCACTT Sde_2314 2940980 - 2940672 - | hypothetical protein TERM 3114 2941098 - 2941076 - R 90 -11.4 -3.72051 | opp_overlap 2941080, overlap 2941080 GGGAATAACTCGAAA GAAAGGCTGA CGC TCAACCTTTC TAAATAAACACCTAA TERM 3115 2941094 - 2941080 - R 74 -6.4 -4.46835 | opp_overlap 2941080, overlap 2941076 ATAACTCGAAAGAAA GGCTGA CGC TCAACC TTTCTAAATAAACAC Sde_2315 2942288 - 2941110 - | hypothetical protein TERM 3116 2941830 - 2941856 + g 95 -14.6 -3.60296 | overlap 2941822 GTGGCGACCATCTGT GCTGGTTATGTA GCT TACATAGCCAGC TTTAGGGTCCAGGTG Sde_2316 2942664 - 2944310 + | putative methyl-accepting chemotaxis sensory transducer TERM 3117 2944400 - 2944363 - T 74 -10.1 -3.18383 | opp_overlap 2944348 2944373, overlap 2944364 AGTTCCATTTAGGAA CCTTGACTAACTTCAAA CGCT TTTGGAGTTAGTCAAAA AATCTTGAATAATAG TERM 3118 2944399 - 2944364 - T 79 -11.4 -2.50816 | opp_overlap 2944373, overlap 2944363 GTTCCATTTAGGAAC CTTGACTAACTTCAAA CGCT TTTGGAGTTAGTCAAA AAATCTTGAATAATA TERM 3119 2944437 - 2944422 - T 71 -3.3 -4.93316 | GAATAATAGCAAAAA TTACG TCAAAG CGTAA ATTACTACCGGTCTC Sde_2317 2944986 - 2944681 - | hypothetical protein Sde_2318 2945563 - 2945153 - | hypothetical protein Sde_2319 2946571 - 2946128 - | hypothetical protein Sde_2320 2947220 - 2948347 + | NADH oxidoreductase-like TERM 3120 2948756 - 2948737 - T 80 -3.7 -5.28826 | AAATTTGATAAAAAA CAAAAAT GCCATT ATTTTTG GATATTGAACACTTC Sde_2321 2949769 - 2948996 - | methionine aminopeptidase, type I Sde_2322 2949968 - 2949762 - | EGF-like Sde_2323 2951097 - 2950372 - | uroporphyrin-III C-methyltransferase-like TERM 3121 2951279 - 2951293 + G 76 -4.2 -5.04175 | overlap 2951274 CACTGCACTTCACGC TGCGTG CGC CGTGCA TTTTTATGTGGTTAC TERM 3122 2951475 - 2951459 - g 73 -2.2 -5.20534 | ATCAACCAACAAAAA GCGCTA GCACT TACCGC TAAAGAAGTATGCGC Sde_2324 2951213 - 2951839 + | Elongator protein 3/MiaB/NifB Sde_2325 2951887 - 2952189 + | molybdopterin binding domain-containing protein TERM 3123 2952334 - 2952364 + T 76 -9.9 -3.24858 | opp_overlap 2952334, overlap 2952332 2952331 AGGAATAAAAAATAA GGCAGTAGTTAAG ATTTC TTTAATTACTGCC TGTCTTGATTATTTC TERM 3124 2952364 - 2952334 - T 82 -7 -4.82661 | opp_overlap 2952334 2952332 2952331 AGGAATAAAAAATAA GGCAGTAGTTAA GATTTCT TTAATTACTGCC TGTCTTGATTATTTC Sde_2326 2953034 - 2952573 - | molybdopterin binding domain-containing protein TERM 3125 2953064 - 2953048 - R 86 -11.5 -3.35798 | opp_overlap 2953052 ATGGCTTACTCATAA CGCCGCC AGA AGCGGCG AGCAATTTATTGCGA Sde_2327 2953622 - 2953071 - | hypothetical protein TERM 3126 2953714 - 2953702 - R 73 -9.1 -3.53224 | GAGTTTTGCGGTAAA GTGGC GAA GCCAC AGCAAAACGGAGCGT TERM 3127 2953751 - 2953739 - R 75 -3.4 -5.15634 | GAGCGTAGCAAAAAA TGTC CTGTT GACA AACTTGTTATAGCTC Sde_2328 2954124 - 2953774 - | hypothetical protein TERM 3128 2954200 - 2954172 - R 81 -10.9 -3.39327 | opp_overlap 2954180 2954180 2954180 2954181, overlap 2954180 2954181 CCGGCAGAGCTATAA CGCCTAAAGCAGC GGC GCCGCTTGCGGCG TCCTGCTGGCTTTTT TERM 3129 2954180 - 2954206 + r 93 -12.3 -3.04947 | gap 1, opp_overlap 2954172 2954180 2954181, overlap 2954180 2954180 2954181 GCTATAACGCCTAAA GCAGCGGCGCCG CTTG CGGCGTC-CTGC TGGCTTTTTTTGTTA TERM 3130 2954180 - 2954210 + r 100 -6.2 -5.80364 | gap 3, opp_overlap 2954172 2954180 2954181, overlap 2954180 2954180 2954181 GCTATAACGCCTAAA GC-AGC-GG-CGCCG CTTG CGGCGTCCTGCTGGC TTTTTTTGTTAGGCT TERM 3131 2954206 - 2954180 - R 80 -10.1 -3.62591 | gap 1, opp_overlap 2954180 2954180 2954180 2954181, overlap 2954172 2954181 GCTATAACGCCTAAA GCAGCGGCGCCG CTTG CGGCGTC-CTGC TGGCTTTTTTTGTTA TERM 3132 2954181 - 2954208 + r 73 -9.9 -3.0287 | gap 2, opp_overlap 2954172 2954180 2954181, overlap 2954180 2954180 2954180 CTATAACGCCTAAAG CAGC-GG-CGCCG CTTG CGGCGTCCTGCTG GCTTTTTTTGTTAGG TERM 3133 2954208 - 2954181 - R 72 -9.9 -2.77233 | gap 2, opp_overlap 2954180 2954181 2954180 2954180, overlap 2954172 2954180 CTATAACGCCTAAAG CAGC-GG-CGCCG CTTG CGGCGTCCTGCTG GCTTTTTTTGTTAGG Sde_2329 2954843 - 2954175 - | hypothetical protein TERM 3134 2955085 - 2955069 - R 73 -2.9 -5.10029 | opp_overlap 2955083 AGGAATTGCAAAAAA GCGAAGA AAA TACTCGC TAAAATTGCGTTTAG TERM 3135 2955159 - 2955147 - R 71 -4.1 -4.79667 | AAAACCGAGGAAAAA GCCAT CCC ATAGC GCATACAAATTAACC TERM 3136 2955248 - 2955293 + r 82 -8.3 -4.39426 | opp_overlap 2955249 2955251, overlap 2955249 TCCTCAGCGGCAAAA GCATGGTGGCGTGACTTTTGC GCAA GCAAAAGACATGACGCTATGA TTTTGTCCGGCTGTA TERM 3137 2955249 - 2955292 + r 86 -11.8 -3.23174 | opp_overlap 2955249 2955251, overlap 2955248 CCTCAGCGGCAAAAG CATGGTGGCGTGACTTTTGC GCAA GCAAAAGACATGACGCTATG ATTTTGTCCGGCTGT Sde_2330 2955734 - 2955327 - | hypothetical protein Sde_2331 2957054 - 2956614 - | hypothetical protein TERM 3138 2956993 - 2957020 + g 70 -4.8 -4.54047 | gap 1, overlap 2956994 AAACGCATAACGCCT AGCTCACCTGCAA CCT TTGC-GGAGAGCA TTTTGTGTAAAATGG Sde_2332 2957485 - 2957093 - | hypothetical protein TERM 3139 2957508 - 2957545 + r 71 -6.7 -4.10453 | opp_overlap 2957509, overlap 2957509 2957539 2957542 CCTAACGCCTTTATA ACGGGCCGGAGCAGCGC AGCT GCGGAGGTCCGGCGCGC TTTTCAGCGCCTTTC TERM 3140 2957509 - 2957544 + r 76 -10.2 -3.0579 | opp_overlap 2957509, overlap 2957508 2957539 2957542 CTAACGCCTTTATAA CGGGCCGGAGCAGCGC AGCT GCGGAGGTCCGGCGCG CTTTTCAGCGCCTTT TERM 3141 2957544 - 2957509 - R 78 -10.2 -3.30159 | opp_overlap 2957509 2957508 2957539 2957542 CTAACGCCTTTATAA CGGGCCGGAGCAGCGC AGCT GCGGAGGTCCGGCGCG CTTTTCAGCGCCTTT TERM 3142 2958037 - 2958023 - R 71 -5 -4.67353 | opp_overlap 2958023, overlap 2958024 GGAGCGACGGAAAAA CTGTCA ATT TGACAA CTTTGTTAGATTCCC Sde_2333 2958789 - 2958043 - | hypothetical protein Sde_2334 2959289 - 2958870 - | hypothetical protein Sde_2335 2960410 - 2959892 - | hypothetical protein Sde_2336 2961115 - 2960537 - | hypothetical protein Sde_2337 2961781 - 2961467 - | hypothetical protein Sde_2338 2962165 - 2961803 - | hypothetical protein TERM 3143 2962025 - 2962040 + g 81 -3.3 -5.31877 | ATCAGAAAGAAATTC TAAGG ATTCTG CCTTA TTTTTTATGCTAAAT Sde_2339 2963602 - 2963258 - | hypothetical protein TERM 3144 2964562 - 2964572 + r 71 -4 -4.82678 | CCCGTAAAGATAAGC TTGA TCA TCAA TTTTAATTTTTCTCA TERM 3145 2964622 - 2964658 + r 70 -9.6 -2.89234 | gap 2, opp_overlap 2964618 2964615 2964613, overlap 2964621 2964633 ATGAAATATAACGCC CAATT-CAAGCG-CCGCC GAA GGCGGTCGGTTGGAATTG ATTGTTATGAGCTTT TERM 3146 2964633 - 2964645 + r 73 -10.5 -2.55253 | opp_overlap 2964618 2964615 2964613, overlap 2964622 2964621 CGCCCAATTCAAGCG CCGCC GAA GGCGG TCGGTTGGAATTGAT Sde_2340 2965703 - 2964663 - | hypothetical protein TERM 3147 2966032 - 2966016 - R 73 -2.9 -5.10029 | opp_overlap 2966030 AGGAATTGCAAAAAA GCGAAGA AAA TACTCGC TAAAATTGCGTTTAG TERM 3148 2966106 - 2966094 - R 71 -4.1 -4.79667 | AAAACCGAGGAAAAA GCCAT TCC ATAGC GCATACAAATTAACC Sde_2341 2967168 - 2966785 - | hypothetical protein TERM 3149 2967125 - 2967145 + g 76 -4 -4.93547 | CTAAATTGCAGCGAC GGAAATTG CGACT CTATTTCC TTTTTCATTGCTTCG TERM 3150 2967246 - 2967236 - R 71 -6.8 -4.07687 | overlap 2967237 AGTTTTGCGGTAAAA TGGC GAA GCCA CCGCAAAACGGAGCG TERM 3151 2967284 - 2967272 - R 75 -3.4 -5.15634 | GAGCGTAGCAAAAAA TGTC CTGTT GACA AACTTGTTATGTGCC Sde_2342 2967740 - 2967291 - | Ig-like, group 2 TERM 3152 2968264 - 2968241 - R 77 -10.2 -3.12668 | overlap 2968254 TAGCTTTACAGCTAA CGCCGGCAGC AAAG GCTGCCGAAG GCAGTCCAGTGGAGC TERM 3153 2968270 - 2968254 - R 70 -7.9 -3.73072 | overlap 2968241 AACGCCGGCAGCAAA GGCTGCC GAA GGCAGTC CAGTGGAGCATAGCG Sde_2343 2968756 - 2968307 - | formyltetrahydrofolate deformylase TERM 3154 2968843 - 2968859 + r 70 -2.9 -5.0065 | TTGATTGTTAGGTGA TGCCTGC TTA GTACGCA TTTTCTTTCTCAATG Sde_2344 2969419 - 2968850 - | hypothetical protein TERM 3155 2969435 - 2969485 + r 75 -8.5 -3.79678 | gap 2, opp_overlap 2969444, overlap 2969436 GCATTCACCTAACGC CGCCAT-AAATTG-CCGCTTGAAGC GCA GCGTAAAGCGGTCAATTTGATGGCC TTGTTATGAGCCATT TERM 3156 2969436 - 2969484 + r 83 -12 -2.87325 | gap 2, opp_overlap 2969444, overlap 2969435 CATTCACCTAACGCC GCCAT-AAATTG-CCGCTTGAAGC GCA GCGTAAAGCGGTCAATTTGATGGC CTTGTTATGAGCCAT Sde_2345 2969864 - 2969472 - | hypothetical protein TERM 3157 2969992 - 2969978 - g 72 -5 -4.67353 | overlap 2969979 GGAGCGACGGAAAAA CTGTCA ATT TGACAA CCTTGATACTTATGA TERM 3158 2970431 - 2970407 - g 70 -2.1 -5.03314 | gap 1, opp_overlap 2970407 TTGACTCGGAAAAAA TCGCACGCAT TATGAG AGGCG-GCGA TTTCCCTCTCGCCTA Sde_2346 2969944 - 2971137 + | arginyl-tRNA synthetase, class Ic Sde_2347 2972070 - 2971633 - | hypothetical protein TERM 3159 2972467 - 2972455 - R 71 -4.1 -4.79667 | AAAACCGAGGAAAAA GCCAT TCC ATAGC ACATTCAAATTAACC TERM 3160 2972920 - 2972941 + r 73 -7.3 -4.11394 | CTACGAAAGCACGTT GTAATTGGC TTTA GCCTATTAC TTTTACAAATGGAAT Sde_2348 2973606 - 2973178 - | helicase c2 TERM 3161 2973907 - 2973920 + r 90 -2.3 -5.95166 | AACTGCCATTCAGAG CCGGG CTTG TTCGG TTTTTTTTCGTTCAC TERM 3162 2974549 - 2974576 + r 74 -4.1 -4.9792 | gap 1, overlap 2974550 CAAACCATAACGCCT TGCTCACCGGCA CATAC TG-CGGAGAGCG TTTTTGTGTAAAATG Sde_2349 2975149 - 2974649 - | phospholipid/glycerol acyltransferase TERM 3163 2974916 - 2974886 - G 74 -5.5 -4.64766 | gap 1, overlap 2974888 TTGATATGGGAAAAA TATT-GAGGCGGCT AAAA ATCCGCCTCCAACA AGCCCCGCAGCCACT TERM 3164 2974913 - 2974888 - G 71 -7.5 -3.93817 | overlap 2974886 GATATGGGAAAAATA TTGAGGCGGCT AAAA ATCCGCCTCCA ACAAGCCCCGCAGCC Sde_2350 2976546 - 2975935 - | response regulator receiver domain-containing protein Sde_2351 2976802 - 2977401 + | hypothetical protein TERM 3165 2977407 - 2977396 - T 71 -2.2 -5.19261 | opp_overlap 2977403, overlap 2977398 AAAGTGATTAAAAAA CGCT AGCT AGCA AACGCTAATTGCTAG TERM 3166 2977433 - 2977443 + T 70 -5.4 -4.4261 | opp_overlap 2977433 GCTAGTAGATAAAAG CTAG TGA CTAG TTTTAGTGTTGCACC TERM 3167 2977517 - 2977500 - T 100 -14.1 -5.77856 | AATAAACCAAAAAAA GGCGGCC ATAT GGCCGCC AAACTGGTGCAAATT TERM 3168 2977635 - 2977618 - T 78 -9.8 -3.54146 | AATACGCCAAATCAA CGGGGC TTCCCT GCCCCG CCCTTGCCTGGCAAA Sde_2352 2979599 - 2977752 - | aspartate carbamoyltransferase TERM 3169 2978091 - 2978111 + g 75 -11.1 -3.05343 | overlap 2978103 TTCGTGCTCTGCGTC GGTCATGCC TTT GGCGTGGCC TATTAAGCCTATGCC TERM 3170 2979509 - 2979481 - G 72 -9 -3.57792 | gap 1, opp_overlap 2979481 CCATTTACTCGTAAA CTTACGC-CGTTA TCGC CAACGGGCGTAAG TTTAATTGGCGTACC TERM 3171 2979481 - 2979509 + g 74 -8.3 -3.91911 | gap 1, opp_overlap 2979481 CCATTTACTCGTAAA CTTACG-CCGTT ATCGCC AACGGGCGTAAG TTTAATTGGCGTACC Sde_2353 2981798 - 2979615 - | assimilatory nitrate reductase (ferredoxin) precursor TERM 3172 2981826 - 2981841 + r 77 -6.2 -4.7329 | ATCCTTGTGACTTAT TTCAAC GCTA GTTGAA TTTTTCCGTCATTTT Sde_2354 2982151 - 2981822 - | assimilatory nitrite reductase (NAD(P)H) small subunit TERM 3173 2981933 - 2981955 + g 75 -6.2 -4.42765 | opp_overlap 2981920 2981925 ATTAAAGTGCTGCTT TAGCAGTGGC GAG GCCACGACTA TTTGATTTTTTAGCG Sde_2355 2984727 - 2982172 - | assimilatory nitrite reductase (NAD(P)H) large subunit precursor TERM 3174 2983351 - 2983374 + g 70 -5.3 -4.52857 | opp_overlap 2983344, overlap 2983344 CACACAACCACCACA GCTAGTACC CGCTTT GGTGTTAGC TTTTATATCGCCAAT TERM 3175 2983615 - 2983631 + g 84 -5 -5.33866 | opp_overlap 2983614 2983612, overlap 2983617 ATCGCCTACCAATAC CGCGCC CAACA GGCGGG TTTTTTCTGCGTTTA Sde_2356 2985536 - 2984748 - | uroporphyrinogen-III C-methyltransferase TERM 3176 2985857 - 2985867 + H 100 -6.8 -5.98675 | TTTTGCACTGTTTTA GTGC TGC GCAC TTTTTTATTTTTCTA TERM 3177 2986833 - 2986857 + G 70 -5 -4.42062 | overlap 2986831 TGTAATCGCGTGCGC GTAACCGCTT CGGGT AGGCTGTTAC TTTGTTTAGGCAATG Sde_2357 2986041 - 2987036 + | GTP cyclohydrolase subunit MoaA Sde_2358 2987110 - 2987619 + | molybdenum cofactor biosynthesis protein B TERM 3178 2988145 - 2988129 - g 79 -8.7 -4.32177 | GTACTCTACAACAAA GGGCATA TTT TACGCCC ACAGGATTTAGGTAT TERM 3179 2988638 - 2988658 + G 73 -9.7 -3.3095 | opp_overlap 2988636, overlap 2988636 2988635 AATTCGCAAGCAACT GGGGGTAGC CCA GCTATTCCC TTCTGCGGCGTATAT Sde_2359 2987658 - 2988890 + | molybdopterin molybdochelatase TERM 3180 2989788 - 2989767 - g 72 -2.9 -4.99035 | opp_overlap 2989771, overlap 2989768 CCACTTATATAAAAA GCAACGACG TTAA CGTGGTTGT GACAGAGGCAGACCT TERM 3181 2990299 - 2990279 - g 79 -8.3 -4.22214 | ATTGATGTAAAAGAA CTTATTGCC TAC GGCAAAAAG AAAAATGTAGCCATT TERM 3182 2990471 - 2990454 - g 77 -3.4 -5.19212 | ATTATTACGAAAAAA TTGCCA AAGCAG CGGCAA AAAATAAATTACTTG Sde_2360 2989115 - 2991154 + | putative alpha-glucosidase TERM 3183 2991171 - 2991205 + F 100 -15.9 -4.26076 | opp_overlap 2991179 AACCGATGCTAAGCG CTGTACAACCCTAGC TATTT GGTAGGGTTGTACAG TTTTGCTAAACCTAA TERM 3184 2991792 - 2991808 + G 79 -8.7 -4.30719 | overlap 2991794 CCCTACTAAAAGGCT TACTCGG CCA CCGAGTG TTTATTATAAAGCCC TERM 3185 2991794 - 2991806 + G 76 -9.1 -3.75817 | overlap 2991792 CTACTAAAAGGCTTA CTCGG CCA CCGAG TGTTTATTATAAAGC Sde_2361 2991482 - 2992339 + | exonuclease Sde_2362 2992455 - 2992883 + | hypothetical protein Sde_2363 2992893 - 2993180 + | deoxycytidine triphosphate deaminase Sde_2364 2993190 - 2994023 + | hypothetical protein TERM 3186 2994045 - 2994074 + F 100 -13.7 -4.46757 | AATCATCCGTTATGC GCCTGTTTGTGGG GCTA TTCACAAACAGGC TTTTGTCGCTGTATT Sde_2365 2994179 - 2994745 + | sigma-24 (FecI-like) TERM 3187 2995239 - 2995227 - g 73 -10.5 -3.01791 | opp_overlap 2995227 2995238, overlap 2995214 2995209 2995207 ATGGCCCTGCCAATA CCGGC AAT GCCGG TTTCGAGCAAACCTT TERM 3188 2995227 - 2995239 + G 79 -10.5 -3.53343 | opp_overlap 2995214 2995227 2995209 2995207, overlap 2995238 ATGGCCCTGCCAATA CCGGC AAT GCCGG TTTCGAGCAAACCTT TERM 3189 2995438 - 2995428 - g 71 -6.8 -4.07618 | TTGGCAACAACCAAA TGGC CCT GCCA GTAAGACTAAACAGC TERM 3190 2995497 - 2995485 - g 77 -10.5 -3.37344 | TTGTTATTGAAGTAA GCGCC GGC GGCGC CAAAAAACAAATGCA Sde_2366 2994881 - 2995570 + | electron transport complex, RnfABCDGE type, A subunit Sde_2367 2995594 - 2996424 + | electron transport complex, RnfABCDGE type, B subunit Sde_2368 2996500 - 2997162 + | electron transport complex, RnfABCDGE type, C subunit TERM 3191 2997424 - 2997438 + G 79 -4.2 -5.25699 | opp_overlap 2997411, overlap 2997430 ACTTGGCCAGTTAGA GCCG GCGAAAA CGGC TTTTTCTTCTCTACT TERM 3192 2997821 - 2997811 - g 83 -4 -5.41746 | AACCGGCGAAAAAAA TAAC GGC GTTA AACTGTATGCCCTAG Sde_2369 2997200 - 2998549 + | hypothetical protein TERM 3193 2998568 - 2998605 + T 100 -13.6 -4.09542 | opp_overlap 2998588 2998589 AATCGCTAATTGCTA GGCGCTAATTTCTAGT TAAACC GCTAGAGGTTAGCGCC TTTCTCTAAGTGTTT Sde_2370 2999729 - 2998647 - | electron transport complex, RnfABCDGE type, D subunit Sde_2371 3000010 - 3003084 + | electron transport complex, RnfABCDGE type, G subunit TERM 3194 3003127 - 3003091 - T 83 -10.9 -3.54109 | overlap 3003092 GTAAGCTAATCACAA TTCCCCTGTAAGCGC AGCATAG GCGCTTACAGGGCAT ACCACATTATTCAAC TERM 3195 3003126 - 3003092 - T 100 -14.4 -2.71984 | overlap 3003091 TAAGCTAATCACAAT TCCCCTGTAAGCGC AGCATAG GCGCTTACAGGGCA TACCACATTATTCAA Sde_2372 3004273 - 3003134 - | L-threonine O-3-phosphate decarboxylase TERM 3196 3003424 - 3003442 + g 78 -6 -4.79667 | CGTTAATATTCTTTA GCCTAC TTTCGTC GTAGGC TTTTTGCTCGGTTTT TERM 3197 3004048 - 3004033 - G 79 -4 -5.26316 | gap 1, opp_overlap 3004041, overlap 3004034 TTACCCCAGAAAAAA GCGCGAT ATT ATCG-GC GATAGATTCATTAGA TERM 3198 3004373 - 3004362 - R 70 -3.6 -4.84761 | AGACTTTGATAAAAA CGCG CAAC CGCA TATTGAGAACATAAC TERM 3199 3004499 - 3004479 - R 78 -9 -3.8802 | opp_overlap 3004479, overlap 3004473 AAAACAGAACGCAAA GCAGGCTT AAGCA AAGCCCGC TTGTAATGACAGTAA Sde_2373 3005043 - 3004777 - | hypothetical protein TERM 3200 3004971 - 3004953 - G 100 -10.3 -5.05153 | AGGGGAAAAAAGAAA CGCCTAC ACTGG GTAGGCG AGAATATAAAGCGCG Sde_2374 3006501 - 3005122 - | hypothetical protein Sde_2375 3013038 - 3006520 - | glucose/sorbosone dehydrogenases-like TERM 3201 3007645 - 3007668 + g 74 -10.4 -3.17212 | opp_overlap 3007651, overlap 3007651 GTCTTCGCTCGCATC GTATAACGCT AGGT AGCGTTGTAC TTCGTCCGCTGCTAA TERM 3202 3010102 - 3010085 - G 72 -2.6 -5.05113 | GGTATAGAAATAAAA TGCCGC GCAATG GCGCCA TCAAACCAGCCATCG TERM 3203 3011176 - 3011146 - G 71 -3.9 -4.74787 | overlap 3011147 3011148 3011150 ATAAATATAAATAAA CCCATTCGACGCG TAGTT CGGGTCGAATGCC ATGCTCAGCAAACCC TERM 3204 3011174 - 3011148 - G 73 -10.9 -2.63833 | overlap 3011147 3011146 3011150 AAATATAAATAAACC CATTCGACGCG TAGTT CGGGTCGAATG CCATGCTCAGCAAAC TERM 3205 3013418 - 3013401 - R 74 -6.3 -4.57569 | opp_overlap 3013401, overlap 3013403 TCACTCTGCGAAAAA TCGATCC AATT GGATCAA ATTTTTAATACGCAC TERM 3206 3013692 - 3013639 - R 75 -5.7 -4.74084 | opp_overlap 3013650 3013651 3013657, overlap 3013645 AAACTAAAACTAAAA CTAAAACTAAAA-CTAAAAGCGCAG ACCAAA CTACGCTTTTAGCTTTTAGCTGT-G AACTGTGAACTGTGA TERM 3207 3013687 - 3013645 - R 100 -12.4 -4.74084 | gap 1, opp_overlap 3013650 3013651 3013657, overlap 3013639 AAACTAAAACTAAAA CTAAAA-CTAAAAGCGCAG ACCAAA CTACGCTTTTAGCTTTTAG CTGTGAACTGTGAAC TERM 3208 3013651 - 3013680 + r 72 -9.4 -3.13773 | opp_overlap 3013645 3013639, overlap 3013650 3013657 AAACTAAAACTAAAA CTAAAAGCGCAG ACCAAA CTACGCTTTTAG CTTTTAGCTGTGAAC Sde_2376 3014658 - 3013777 - | formyltetrahydrofolate deformylase TERM 3209 3014237 - 3014225 - G 79 -7.7 -4.4959 | GGTAAGTAATGAAAA GGTAC GCC GTACC ACTCGCACAAAGGCT Sde_2377 3015751 - 3014930 - | short chain dehydrogenase Sde_2378 3016543 - 3015770 - | enoyl-CoA hydratase TERM 3210 3017032 - 3017043 + G 74 -7.2 -4.29106 | opp_overlap 3017031 AGCAAAGTTGAAATT GCCG GCCC CGGC TTTATTAATATCCAC TERM 3211 3017994 - 3017974 - g 79 -8.3 -4.34402 | GGCGGCACAGTAAAA CTCGCCCAA TTG TTAGACGAG GCCGTAGAGCGTGCA Sde_2379 3016801 - 3018540 + | arginyl-tRNA synthetase TERM 3212 3018549 - 3018536 - T 77 -3.9 -5.10497 | opp_overlap 3018536 3018546 AAGTGATGGAAAAAA TGTAA GTTA TTACA TTCTGTATATTTGTA TERM 3213 3018598 - 3018569 - T 71 -4.9 -4.61231 | opp_overlap 3018575, overlap 3018573 3018575 GTATATTTGTAAAAA GTAATACGGGAGC CTAA GCTCCCGTTTTTT ATAATAACTCCCGTC TERM 3214 3018594 - 3018573 - T 84 -10.1 -3.81256 | opp_overlap 3018575, overlap 3018569 3018575 ATTTGTAAAAAGTAA TACGGGAGC CTAA GCTCCCGTT TTTTATAATAACTCC TERM 3215 3018592 - 3018575 - T 100 -12.7 -3.48505 | opp_overlap 3018575, overlap 3018573 3018569 TTGTAAAAAGTAATA CGGGAGC CTAA GCTCCCG TTTTTTATAATAACT TERM 3216 3018575 - 3018592 + T 100 -12.7 -5.31877 | opp_overlap 3018575 3018573 3018569 TTGTAAAAAGTAATA CGGGAGC CTAA GCTCCCG TTTTTTATAATAACT Sde_2380 3018982 - 3018656 - | glyoxalase I dinG 3021144 - 3018982 - | ATP-dependent DNA helicase DinG TERM 3217 3020873 - 3020886 + g 70 -2.4 -5.08824 | AAGGCCACGGTAGCC GTTG CGAGCA CAAC TTTTTTGCCTAACGC Sde_2382 3022297 - 3021134 - | cytochrome oxidase maturation protein cbb3-type Sde_2383 3022656 - 3023960 + | response regulator receiver modulated diguanylate cyclase TERM 3218 3023980 - 3024017 + T 100 -14.3 -3.37935 | opp_overlap 3023990, overlap 3023981 3023990 TTCTCTAACAATCGC CCATAAAAAAGCCCCGC AAAT GCAGGGCTTTTTTATGC TTAATAATTTTCGCT TERM 3219 3023981 - 3024016 + T 100 -17.8 -2.62038 | opp_overlap 3023990, overlap 3023980 3023990 TCTCTAACAATCGCC CATAAAAAAGCCCCGC AAAT GCAGGGCTTTTTTATG CTTAATAATTTTCGC TERM 3220 3024007 - 3023990 - T 100 -10.5 -5.24531 | opp_overlap 3023981 3023980 3023990 ATCGCCCATAAAAAA GCCCCGC AAAT GCAGGGC TTTTTTATGCTTAAT TERM 3221 3023990 - 3024007 + T 100 -8.3 -5.38249 | opp_overlap 3023990, overlap 3023981 3023980 ATCGCCCATAAAAAA GCCCCGC AAAT GCAGGGC TTTTTTATGCTTAAT Sde_2384 3024530 - 3024039 - | hypothetical protein TERM 3222 3024155 - 3024174 + g 72 -6.5 -4.25104 | TGTCTATTTCTGATG TGGTGAT ATTGCC ATCACCA TTTTGATCAAAGCGG TERM 3223 3024428 - 3024444 + g 76 -5.1 -4.81083 | overlap 3024429 TAACATCGTATTTTG CGAGCAA CCA TTGCTCA TTTTTACTCGTTCCC TERM 3224 3024516 - 3024500 - G 77 -10.9 -3.14051 | overlap 3024498 TTACGCTTACCAACA TGCACAG TAG CTGTGCA ACGCGAATAGACATT TERM 3225 3024777 - 3024743 - R 100 -12.4 -3.9978 | GTATAAAAGTAACAA TTGAGCTATAACCA CACATAT TGGCTATAGCTCAA AACTCAGAATGGGTG Sde_2385 3025833 - 3024820 - | aspartate carbamoyltransferase Sde_2386 3026897 - 3026010 - | cytochrome c oxidase cbb3-type, subunit III TERM 3226 3026992 - 3026982 - R 75 -5.4 -4.81357 | ACACCACAAAACAAA TAGC TGC GCTA AATAGTTATGCAAAA Sde_2387 3027586 - 3027062 - | hypothetical protein TERM 3227 3027279 - 3027295 + g 80 -6.5 -4.76644 | overlap 3027293 GCAACAGTGCCCTCT CGCAACA AGG TGTAGCG TTTTTGATCGCTATT Sde_2388 3027753 - 3028310 + | sigma-24 (FecI-like) Sde_2389 3028307 - 3029335 + | cytochrome c oxidase cbb3-type, subunit I TERM 3228 3029627 - 3029638 + G 70 -2.2 -5.00267 | TTACTGCAGTAACCT TGGG TGCT CTCA TTTCTTTTTCTGCTT TERM 3229 3031485 - 3031456 - g 74 -5.9 -4.62054 | gap 1, opp_overlap 3031445 TTAACCAAAGCAAAA TTTGGCTTTCAGCA CTC TACCGAAA-CCAAA GCACTTGAGCGCTGG Sde_2390 3029518 - 3032847 + | argininosuccinate synthase TERM 3230 3032881 - 3032901 + F 100 -14.7 -5.00884 | TAGGCTTTGACCCTT GACCGCCGT ACT GCGGCGGTC TTTTTTAAGCCAAAT TERM 3231 3033244 - 3033230 - g 70 -10 -2.95918 | overlap 3033229 3033226 CAACCTTTAAACAAG GCGCAA AAT TTGCGC GCTGGACAACAGGCA Sde_2391 3032944 - 3034524 + | tryptophan halogenase, putative Sde_2392 3034586 - 3035311 + | SapC related protein TERM 3232 3035508 - 3035525 + G 90 -9.9 -4.39426 | CTTTCCAAATACTTC GTTGGTG ACGA CACCAAC TTTTATCCAGGTATA Sde_2393 3035304 - 3036077 + | hypothetical protein sbcB 3037538 - 3036081 - | exonuclease I Sde_2395 3037638 - 3038267 + | dihydroorotase homodimeric type TERM 3233 3038325 - 3038343 + T 100 -10.2 -5.09762 | opp_overlap 3038325 AGAGCACACAAAAAA GCCCGCAA ATT TAGCGGGC TTTTTATATTAGGCT TERM 3234 3038343 - 3038325 - T 100 -10.2 -5.40625 | opp_overlap 3038325 AGAGCACACAAAAAA GCCCGCAA ATT TAGCGGGC TTTTTATATTAGGCT dcd 3038987 - 3038418 - | deoxycytidine triphosphate deaminase TERM 3235 3038898 - 3038884 - G 71 -7.1 -4.12738 | opp_overlap 3038884 CCATACGAAATCAAA CGCTG CTCAT CAGCG TTATAACGAACCTGG Sde_2397 3040157 - 3039075 - | ATP-binding Mrp/Nbp35 family protein TERM 3236 3041550 - 3041502 - g 82 -2.7 -5.45726 | gap 3, overlap 3041504 TAGACGGCAAAAAAA TG-TCTAAGT-CGCGCGGCACATT TATT AATGC-CCGCACTTACTTAGATCA CTTGCAGCCAGAATA Sde_2398 3040511 - 3042544 + | methionyl-tRNA synthetase TERM 3237 3042532 - 3042552 + F 79 -8.3 -4.19678 | CGCCCTACCCGGCAT GCGTGTAAT GTA ATTACCCGC TTTATTAAAGTGTCG TERM 3238 3042938 - 3042912 - g 85 -7.2 -5.08824 | opp_overlap 3042913 3042915, overlap 3042915 TGTTTATTGAAAAAA CCAGCCCTCTAC TCA ATCGAGTGCTGG GCGTGTTTCTACCCC Sde_2399 3042629 - 3043204 + | bacterioferritin TERM 3239 3043395 - 3043368 - g 74 -8.4 -3.99592 | gap 1, overlap 3043370 AGCTATTACCACAAA CACAGTGTGGCCA ATG TGGCCACCCCG-G CTGCCGCCCCTACGC TERM 3240 3043394 - 3043370 - g 86 -12.1 -3.58864 | overlap 3043368 CTATTACCACAAACA CAGTGTGGCCA ATG TGGCCACCCCG GCTGCCGCCCCTACG TERM 3241 3043667 - 3043641 - g 71 -8 -3.90112 | GTGCGGCCAAGCAAA TGCACACAGTAA TTG TTTCTGAGTGCA CGGGCTGCGACTTGT Sde_2400 3043211 - 3043831 + | NADH:ubiquinone oxidoreductase, subunit RnfB TERM 3242 3043894 - 3043879 - g 78 -5.4 -4.87892 | opp_overlap 3043890, overlap 3043881 CCCGAAGAAAACAAA CACCAG TCCA CTGGTA CAGCCATTGGCTCTA TERM 3243 3043968 - 3043931 - g 73 -7.7 -4.07133 | TACCGCCAGAAATAA TTCTGCCGTTAAACCAA CATA TTGGTGCGCCGGCAGAA GCTTGCGTAAGTGTT TERM 3244 3044233 - 3044219 - g 79 -4.2 -5.24129 | opp_overlap 3044219 GTCTCGTACAAAAAA TACGCG CAG CGGGTA TTGTAGGTATGGGGG TERM 3245 3044393 - 3044412 + G 71 -7.8 -3.86015 | opp_overlap 3044392 3044393 ACGATATAGTAAAAG GCGTGCAA CTTA TTGCTCGC TTTATGGGAGAAGTA TERM 3246 3044941 - 3044905 - g 72 -2.7 -5.0916 | opp_overlap 3044912, overlap 3044907 3044908 GCCCCAACACAAAAA GAGCTCCCCCTGGCGCC ACC GGCGCAAGCGTGTATTC GCTGCGGTATGTGTG TERM 3247 3045715 - 3045705 - g 71 -6.8 -4.04295 | CGAAGCACAAGCAAA TGGC GCA GCCA CGGTTGATGCACTGA Sde_2401 3043828 - 3046065 + | electron transport complex protein RnfC Sde_2402 3046208 - 3047047 + | hypothetical protein TERM 3248 3047055 - 3047075 + F 71 -8.2 -3.5394 | opp_overlap 3047053, overlap 3047056 AGAAGTAATTACAGC TCGGGGTG CCAGC CACCCCGC TTTACCACCCAATTT TERM 3249 3047056 - 3047074 + F 80 -11.7 -2.72043 | opp_overlap 3047053, overlap 3047055 GAAGTAATTACAGCT CGGGGTG CCAGC CACCCCG CTTTACCACCCAATT Sde_2403 3047112 - 3048185 + | electron transport complex protein RnfD TERM 3250 3048302 - 3048292 - g 85 -5.4 -5.27923 | overlap 3048280 CAACTGCAGAAAAAA TTGC AGA GCAA GAGAAGCGAGCAGCA TERM 3251 3048342 - 3048324 - g 74 -3.8 -4.93296 | overlap 3048337 3048339 CGAGCAGCAGAAAAA GCCCTACT ACA AATAGTGC CGCGCGAGCGTCACG Sde_2404 3048189 - 3048836 + | electron transport complex protein RnfG TERM 3252 3049240 - 3049222 - g 74 -3.8 -4.91852 | overlap 3049223 GCCAGTAAAAACAAA GTACTGCC TTC AGCAGTAG ACGGTTTTATGATGG Sde_2405 3048853 - 3049563 + | SoxR-reducing system protein RsxE TERM 3253 3049623 - 3049648 + T 100 -16.3 -2.57931 | overlap 3049626 TTGTGCCCCACTTTT TAAGGCCCTAG CTAA CTAGGGCCTTA CTTCTACCAGCTACA TERM 3254 3049626 - 3049645 + T 100 -13.6 -3.44325 | overlap 3049623 TGCCCCACTTTTTAA GGCCCTAG CTAA CTAGGGCC TTACTTCTACCAGCT Sde_2406 3050024 - 3049686 - | hypothetical protein Sde_2407 3050661 - 3050122 - | sigma-24 (FecI-like) TERM 3255 3050370 - 3050388 + g 89 -4.6 -5.63517 | TGTCGGGTTGCTCAT CTATATTG CAC CAATCTAG TTTTTTCTTTCGCCA Sde_2408 3051328 - 3050669 - | ornithine carbamoyltransferase Sde_2409 3052376 - 3051519 - | AraC family transcriptional regulator TERM 3256 3052705 - 3052694 - g 82 -5.8 -5.1361 | ATAAACGGTAAAAAA GGCA CATT TGCC ATGCTAGAAAACGGC Sde_2410 3052481 - 3052864 + | hypothetical protein Sde_2411 3055117 - 3052913 - | histidine kinase TERM 3257 3054689 - 3054677 - G 100 -3.3 -5.85737 | opp_overlap 3054677 AGATGAATAAAAAAA GCTAC GCT GTGGC TGAGTTTTTAAAAAC TERM 3258 3055347 - 3055326 - R 85 -7.3 -4.87052 | opp_overlap 3055326 3055325, overlap 3055321 GATAAAGGAATAAAA GCTGCTC GACATACA GAGCAGC GTTTAGGGGGAAGTA Sde_2412 3056364 - 3055369 - | hypothetical protein TERM 3259 3056417 - 3056392 - R 80 -6.3 -4.77036 | opp_overlap 3056391 3056394 TCTTATGAGTAAAAA TAGTTTGATAA TTTG TTAACAAACTA CGTTTTACACGATGT TERM 3260 3056527 - 3056549 + r 76 -10.7 -2.62396 | TAGTAAAAGGCGAGA TCTAGCACT GCGTG AGTGCTAGA TGATATGAAAAACTG Sde_2413 3056989 - 3056606 - | response regulator receiver domain-containing protein Sde_2414 3057850 - 3057011 - | hypothetical protein Sde_2415 3058053 - 3057847 - | secretion protein HlyD Sde_2416 3060570 - 3058186 - | cation transport ATPase Sde_2417 3061146 - 3060574 - | hypothetical protein TERM 3261 3061213 - 3061227 + r 75 -7.1 -4.38927 | TACTTTTAACCGCAG GCCCA ATAAA TGGGC TTTCTTCTGTAGCGG Sde_2418 3062647 - 3061193 - | putative ferredoxin TERM 3262 3061423 - 3061442 + g 71 -7.8 -3.965 | CTTGAATATCGTACT CATGCGCC TCTT GGCTCATG TTATTAATTTTGACC TERM 3263 3061614 - 3061634 + g 84 -8.3 -4.56607 | CCGAATAGACGCGGG CGGAAAAAC TTG GTTTTACCG TTTTCTAGTTCATCC TERM 3264 3062412 - 3062385 - G 84 -7.8 -4.79752 | overlap 3062387 GCCAACAACATAAAA TCTTGCGGCCAA AAAG TTAGCCACAAAA TATGGAACTTGCGCT Sde_2419 3063668 - 3062772 - | cytochrome c oxidase, cbb3-type, subunit III TERM 3265 3063062 - 3063082 + g 70 -4.7 -4.46212 | opp_overlap 3063062, overlap 3063066 CTGAAAGACTTAACA CGTAGTTAG CAA CTAACTGGG TTTTCTCATCACCCA Sde_2420 3063892 - 3063665 - | hypothetical protein TERM 3266 3063730 - 3063742 + g 71 -3.4 -4.77698 | GTTGGTTATCTTTTT TCTG CGCGT CAGA TTTGTTTTCATCTTC Sde_2421 3064509 - 3063898 - | putative cytochrome c oxidase subunit Sde_2422 3065993 - 3064521 - | Cbb3-type cytochrome oxidase, subunit 1 TERM 3267 3066403 - 3066393 - R 78 -5.4 -5.03715 | opp_overlap 3066384 ATTATGCGTAAAAAA CTGT GTT ACAG CAGTTTACGTCCCTT Sde_2423 3067627 - 3066398 - | argininosuccinate synthase TERM 3268 3067766 - 3067788 + H 77 -10.6 -3.14881 | opp_overlap 3067761 3067763 3067766 CGCCAAATAACAGTA TTGCGCTCCA TAA TTGAGCGCAA TTGATCAACCAATTA TERM 3269 3067788 - 3067766 - H 76 -10.6 -2.90309 | opp_overlap 3067766, overlap 3067761 3067763 CGCCAAATAACAGTA TTGCGCTCCA TAA TTGAGCGCAA TTGATCAACCAATTA Sde_2424 3068031 - 3070292 + | hypothetical protein TERM 3270 3071037 - 3071027 - g 76 -8.2 -4.10161 | overlap 3071028 TACTACGGTGCAAAA GCCG CAG CGGC AGACAAAGAAAACGC TERM 3271 3071062 - 3071050 - g 78 -4.7 -5.05113 | GGCAGACAAAGAAAA CGCTG ACA CCGCG GGCCTAGTAGGCTTG Sde_2425 3070340 - 3071686 + | hypothetical protein TERM 3272 3071772 - 3071744 - f 74 -9.8 -3.21772 | gap 1, overlap 3071742 AACCTTCCGACAACA TGGTTAGC-TAAC CGCG GTTATGCTAACCA AATAACAACAAACGG Sde_2426 3071804 - 3072475 + | hypothetical protein Sde_2427 3073512 - 3072544 - | putative outer membrane protein TERM 3273 3072593 - 3072608 + g 71 -6.8 -4.09685 | overlap 3072589 TGACCATCCCCCACT GCGGCA GCAG TGTCGC TTTTACCCCCTAGAG TERM 3274 3074662 - 3074652 - g 78 -5.4 -4.90381 | CGCAACACAACAAAA GTGA CCC TCAC CAAGCAAGCATGGAC Sde_2428 3073689 - 3074768 + | dihydroorotase TERM 3275 3075120 - 3075093 - g 77 -9.2 -3.96298 | overlap 3075088 TAGCCATTAACGAAA TTTTCCGCTCTG TACG CAAAGCGGTAAA AGAGAACGGCTGCAA Sde_2429 3074780 - 3075475 + | ribonuclease T TERM 3276 3075528 - 3075503 - T 100 -15.5 -5.43414 | opp_overlap 3075503 ACTACACATAAAAAA GCCGCTATGGA TTGC TCCACAGCGGC TTTTTTACTTTAAAC TERM 3277 3075503 - 3075528 + T 100 -13.3 -5.37593 | opp_overlap 3075503 ACTACACATAAAAAA GCCGCTATGGA TTGC TCCACAGCGGC TTTTTTACTTTAAAC Sde_2430 3076154 - 3075552 - | response regulator receiver domain-containing protein TERM 3278 3076253 - 3076229 - H 81 -10.7 -3.31726 | opp_overlap 3076213, overlap 3076227 CCCGCCTATATAACA GGTGGGGCTAT CAT ACACCCCCACC CTCAACCCCTTGATT Sde_2431 3076510 - 3076716 + | hypothetical protein Sde_2432 3076877 - 3077350 + | bacterioferritin TERM 3279 3077376 - 3077412 + T 100 -13.9 -3.46068 | opp_overlap 3077387 3077395, overlap 3077374 CCTAGAATCATCATC TATTCAGCGAAGGCT AACACCC AGCCTTCGCTGAAAA TCTTTACGTTACCCC Sde_2433 3078196 - 3077429 - | hypothetical protein Sde_2434 3080933 - 3078243 - | Serine/threonine protein kinase-like TERM 3280 3081103 - 3081137 + r 70 -5.9 -4.25859 | gap 1, opp_overlap 3081103 3081105, overlap 3081100 GCCAAAAGACTTAAA TAGCG-CTGTTTAATG AACG CATTAAACGGGCCCTA TTCTTTTAACTTACG Sde_2435 3081920 - 3081135 - | hypothetical protein Sde_2436 3082458 - 3081913 - | hypothetical protein TERM 3281 3082503 - 3082488 - R 100 -11.8 -4.25074 | opp_overlap 3082488 CATTAAATGGCAAAA GGGGCC CGCA GGCCCC TAATTCACGTTAGCT TERM 3282 3082488 - 3082503 + r 83 -11.8 -2.7566 | opp_overlap 3082488 CATTAAATGGCAAAA GGGGCC CGCA GGCCCC TAATTCACGTTAGCT Sde_2437 3083721 - 3082525 - | hypothetical protein TERM 3283 3083134 - 3083170 + g 71 -3.7 -4.88736 | opp_overlap 3083134 CAACTCACCAGTAAA CATCACACCAGTTTC CCACCAA GTAACAGGTATGATG TTTTTCTCAATAATG TERM 3284 3083757 - 3083746 - R 90 -5.8 -5.48213 | CATTTAAAATAAAAA GCTG ACAC CAGC GTATCGAGCCATATT TERM 3285 3083826 - 3083812 - R 73 -5.8 -4.49337 | GAATAGTAATGAAAA TGATAA GAG TTATCA ATGAGCAAATGATTG Sde_2438 3084286 - 3083954 - | glutaredoxin-related protein TERM 3286 3084426 - 3084445 + r 75 -2.1 -5.26875 | overlap 3084430 CGCCAACAAGCCAAG GCACC AACCTCACAG GGTGC TTTTTTGCTTCGCCA Sde_2439 3084707 - 3084435 - | hypothetical protein TERM 3287 3084895 - 3084914 + H 100 -13.6 -5.26119 | GAATGATCACTTGTT CAGGCAGC CTTC GCTGCCTG TTTTGTTTTTGGGAG TERM 3288 3086006 - 3085983 - g 100 -9.6 -5.19879 | overlap 3086000 3086002 CGCGAAAGAGAAAAA CCTGCTGTTA AACG TAACAGCCGG CAATACTATTCGCCT Sde_2440 3084937 - 3086103 + | acetylornithine aminotransferase Sde_2441 3086110 - 3087021 + | ornithine carbamoyltransferase TERM 3289 3087335 - 3087290 - f 84 -9.9 -3.86524 | gap 1, opp_overlap 3087303, overlap 3087300 3087303 3087315 AGAGGTTCCTATAAA TGGTCA-AAAAGAAGCCCGC TATTAAC GCGGGCTTTTTTTATGCCCA CACTAAAACCTCACC TERM 3290 3087324 - 3087300 - f 81 -7.1 -4.6526 | opp_overlap 3087303, overlap 3087290 3087303 3087315 ATAAATGGTCAAAAA GAAGCCCGC TATTAAC GCGGGCTTT TTTTATGCCCACACT TERM 3291 3087303 - 3087321 + F 100 -8.8 -5.60993 | opp_overlap 3087303 3087300 3087290 3087315 AATGGTCAAAAAGAA GCCCGC TATTAAC GCGGGC TTTTTTTATGCCCAC TERM 3292 3087321 - 3087303 - f 93 -8.8 -4.42235 | opp_overlap 3087303, overlap 3087300 3087290 3087315 AATGGTCAAAAAGAA GCCCGC TATTAAC GCGGGC TTTTTTTATGCCCAC Sde_2442 3087378 - 3088073 + | putative short-chain dehydrogenase TERM 3293 3088103 - 3088079 - T 100 -14.5 -5.43866 | opp_overlap 3088079 3088081 GAACTTCTAAAAAAA TACCGAGTTAA ACT TTAACTCGGTA TTCAATAAAAAACGG TERM 3294 3088079 - 3088103 + T 100 -14.5 -3.05384 | opp_overlap 3088079, overlap 3088081 GAACTTCTAAAAAAA TACCGAGTTAA ACT TTAACTCGGTA TTCAATAAAAAACGG TERM 3295 3088081 - 3088101 + T 93 -12.7 -3.08679 | opp_overlap 3088079, overlap 3088079 ACTTCTAAAAAAATA CCGAGTTAA ACT TTAACTCGG TATTCAATAAAAAAC Sde_2443 3088578 - 3088327 - | glycine cleavage system P-protein Sde_2444 3090051 - 3088684 - | Signal transduction histidine kinase-like Sde_2445 3090833 - 3090141 - | acyl dehydratase Sde_2446 3091329 - 3092003 + | response regulator receiver domain-containing protein TERM 3296 3092032 - 3092059 + T 100 -11.4 -4.11906 | opp_overlap 3092039, overlap 3092039 CAACCCATCACAACG TAAAAAAGCCCG CAAG CGGGCTTTTTAA TTATTTATCACTTAT TERM 3297 3092039 - 3092052 + T 100 -9.5 -5.05712 | opp_overlap 3092039, overlap 3092032 TCACAACGTAAAAAA GCCCG CAAG CGGGC TTTTTAATTATTTAT TERM 3298 3092052 - 3092039 - T 100 -9.5 -5.1925 | opp_overlap 3092039 3092032 TCACAACGTAAAAAA GCCCG CAAG CGGGC TTTTTAATTATTTAT Sde_2447 3095232 - 3092071 - | RND family efflux transporter TERM 3299 3092591 - 3092579 - G 79 -2.6 -5.27476 | GCGAACAAAATAAAA CCGG CTAAC CCAG CAGACGATAAAATAC Sde_2448 3096375 - 3095296 - | membrane-fusion protein-like TERM 3300 3095382 - 3095400 + g 75 -3.1 -5.11033 | opp_overlap 3095382 CTTCAATGGAATCTA TATCGCC GAGCA GGCAATA TTTTTTACCCTTATA TERM 3301 3096073 - 3096084 + g 72 -5.8 -4.4078 | CGCTAAGCGCGCTTC CAGC ATAC GCTG TTTTGCTTCGGCAAC TERM 3302 3096354 - 3096333 - G 72 -2.9 -5.00616 | opp_overlap 3096353, overlap 3096334 3096352 3096353 CGCTCTTTGAAAAAA CGCCAACTG CAAG CAGTAAGCA GATTATTGTTAATCT Sde_2449 3097888 - 3096455 - | Outer membrane protein-like TERM 3303 3096811 - 3096826 + g 76 -4.6 -5.07567 | GCCAATATTCTTGTT GCGCGG CTAA CTGTGC TTTTTTCGACTCTAG TERM 3304 3097790 - 3097767 - G 77 -11 -3.2048 | overlap 3097758 GTCAAACTCGATGAA GCTACCGCCC ACTC AGGCGGTAAC TCAAACGGAAGCGGC Sde_2450 3098639 - 3097878 - | oxygen-independent coproporphyrinogen III oxidase HemN Sde_2451 3099487 - 3098702 - | thioesterase involved in non-ribosomal peptide biosynthesis-like TERM 3305 3099453 - 3099467 + g 74 -5.8 -4.6709 | opp_overlap 3099453 3099452 TTACGGGGCCTAAAG CAAATA AAA TATTTG TTTTCTGTCGTTTTA Sde_2452 3100755 - 3099529 - | hypothetical protein TERM 3306 3099726 - 3099716 - G 76 -8.2 -4.05512 | ATAACAAAAAATGAA GCCG ACG CGGC GAGCCCTGTTGCCAG TERM 3307 3100123 - 3100099 - G 72 -3 -4.93968 | gap 1 AGGCACAATTAAAAA TGCTGGAA-AT ACAC ATATTCCAACA AGCAAAATACCTATG Sde_2453 3102533 - 3100767 - | putative acyl-CoA synthase Sde_2454 3104253 - 3102526 - | regulatory proteins, IclR Sde_2455 3104520 - 3104263 - | histidine kinase Sde_2456 3104816 - 3104556 - | hypothetical protein TERM 3308 3104896 - 3104872 - R 91 -6.5 -5.54338 | gap 1, opp_overlap 3104872 3104872, overlap 3104873 3104874 3104876 TAATTAAAAGAAAAA CTTACACCGC AATTAA GCGGTGT-AG CGTTTTAATACAGTA TERM 3309 3104895 - 3104874 - R 76 -10.2 -2.91657 | opp_overlap 3104872 3104872, overlap 3104872 3104873 3104876 ATTAAAAGAAAAACT TACACCGC AATTAA GCGGTGTA GCGTTTTAATACAGT Sde_2457 3106212 - 3104884 - | beta-ketoacyl-acyl carrier protein synthase II TERM 3310 3106845 - 3106831 - H 81 -4.2 -5.29885 | AATTTAAAAATAAAA TGCGAC AGA GCCACA ACAAAGGAAAGCTGA TERM 3311 3108047 - 3108062 + H 82 -7.6 -4.57073 | opp_overlap 3108047, overlap 3108032 TAGTGTTTTTATCAA CCACTA TATA TAGTGG TTTTTAGACGCGCTC TERM 3312 3108943 - 3108957 + G 78 -6.4 -4.71061 | overlap 3108941 ATGGACAAGTTGCGT GCTGAG GCA CTTAGC TTTTTGGGTATAGCT Sde_2458 3108235 - 3111144 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3313 3112438 - 3112425 - g 72 -5.3 -4.56597 | CCCCGGCGCGAAAAA TCCAT TCCC ATGGA TGAGCGAGATTATGG Sde_2459 3111259 - 3112530 + | ribonucleotide-diphosphate reductase subunit beta TERM 3314 3112565 - 3112584 + F 100 -13.6 -4.05788 | CAACTTCTGTATTAT TGCTCCCC TTTC GGGGAGCA TTTAATTTACAAACG Sde_2460 3112612 - 3112821 + | hypothetical protein TERM 3315 3113277 - 3113297 + G 73 -7.5 -4.07568 | TAACAATGAACTCTA TGGCCCGCA GCA TGTGCGCCA TTTTGCCACCAGAGC Sde_2461 3112864 - 3113337 + | cellulose binding, type IV TERM 3316 3113528 - 3113488 - g 82 -7.5 -4.56133 | overlap 3113489 3113490 TGCCAACAATCAAAA CCCTGACTGCCGATACCGC ACA GCAGCATCAGCACACAGAA GCACTCGTAGTGGTT TERM 3317 3113527 - 3113489 - g 70 -8.8 -3.32957 | overlap 3113488 3113490 GCCAACAATCAAAAC CCTGACTGCCGATACCGC ACA GCAGCATCAGCACACAGA AGCACTCGTAGTGGT Sde_2462 3113340 - 3113825 + | helix-turn-helix, AraC type TERM 3318 3114518 - 3114496 - g 82 -13.4 -2.81702 | overlap 3114493 3114498 CAAGATGATCAATGA CACCTACGGC CAT GCCGCAGGCG ACGAAGCATTGCTCA TERM 3319 3114516 - 3114498 - g 80 -12.4 -2.94962 | overlap 3114496 3114493 AGATGATCAATGACA CCTACGGC CAT GCCGCAGG CGACGAAGCATTGCT Sde_2463 3113939 - 3114844 + | response regulator receiver modulated diguanylate cyclase TERM 3320 3115174 - 3115201 + T 71 -4.2 -4.79667 | gap 1, overlap 3115174 3115175 3115187 CAAGGCCAATGGATG C-GCCCTATTTTT TGT AAGAACAGGGCCG TTTTTACTGGATTTT Sde_2464 3116305 - 3115514 - | hypothetical protein Sde_2465 3116898 - 3116341 - | hypothetical protein Sde_2466 3118322 - 3117042 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 3321 3117868 - 3117882 + g 72 -2.8 -5.06414 | opp_overlap 3117868 TCATTACTCAAATCA TAGTGC GCG GCAATA TTTTTCTTCGAACCC Sde_2467 3119175 - 3118345 - | hypothetical protein Sde_2468 3120443 - 3119175 - | amine oxidase, flavin-containing Sde_2469 3121241 - 3120444 - | TonB-dependent receptor Sde_2470 3121696 - 3121253 - | ketosteroid isomerase-related protein, cystatin fold TERM 3322 3122439 - 3122463 + G 70 -10.1 -3.05384 | overlap 3122441 3122446 TCAAATCCCGAGTTC GATTGGGGCTT AAA AAGCTTCAATC TTGCGTAGGAGGCAA Sde_2471 3121856 - 3122482 + | sigma-24 (FecI-like) Sde_2472 3122484 - 3123155 + | anti-sigm factor, ChrR TERM 3323 3123143 - 3123172 + F 90 -10.7 -3.95435 | CCCGTTCATTTCTTT TGCACCGCGCT AACCCTAC AGCGCGGCGCA TTATCTTTTGGCAAA TERM 3324 3123685 - 3123675 - f 71 -3.2 -4.94902 | CAACCACCAGAAAAA CGAG AAG CTCA TCACACTTTTTGGCA Sde_2473 3123778 - 3124509 + | hypothetical protein TERM 3325 3124555 - 3124538 - T 100 -11.3 -4.75308 | ATCAATAGCTAAAAA GGCCTTC GAAT GAAGGCC TCAGACTGATGACAA TERM 3326 3124647 - 3124622 - T 100 -11.3 -4.93696 | opp_overlap 3124621 3124620 GTGAAAGATCAAAAA TGCTCAATTCA TGGA CGAATTGAGCA AGTTATAGGGACATA TERM 3327 3124775 - 3124758 - T 81 -11.3 -2.77283 | opp_overlap 3124758, overlap 3124755 3124750 TTATCAATAAACTGA GGCCTTC GAAT GAAGGCC TTTTTTATAAAATAA TERM 3328 3124758 - 3124775 + T 100 -11.3 -5.26316 | opp_overlap 3124755 3124750 3124758 TTATCAATAAACTGA GGCCTTC GAAT GAAGGCC TTTTTTATAAAATAA Sde_2474 3125373 - 3124825 - | MutT/nudix family protein Sde_2475 3126580 - 3125414 - | hypothetical protein TERM 3329 3126735 - 3126719 - H 75 -5.1 -4.8622 | GGCCTCAATCAAAAA CGGTAAT GCT ACCACCG ACCTGCCCACTATAC TERM 3330 3128072 - 3128091 + G 70 -5 -4.42386 | opp_overlap 3128072 3128070 CACAAGCCTAGAAGA TATCCACC AATT GCTGGATA TTTTCTCACTAGGCA Sde_2476 3126768 - 3129662 + | glycine dehydrogenase TERM 3331 3129681 - 3129667 - T 76 -2.8 -5.30189 | opp_overlap 3129669, overlap 3129669 CAGAAGAGTAAAAAA TTGAGT ACA ACTCTA GTTGAATATCGATAA TERM 3332 3129954 - 3129989 + T 76 -10.7 -2.62371 | opp_overlap 3129962 3129979, overlap 3129953 GGATGAGATATTTTA TTGGCAAATAGTTAA AGTAAA TTAACTATTCGCCAA ATTACTTGGCTAGAT Sde_2477 3130592 - 3130236 - | hypothetical protein TERM 3333 3130899 - 3130934 + r 100 -13.4 -3.77241 | opp_overlap 3130908, overlap 3130901 3130908 CACAATCTTTACGCA CACAAAAAAGCCGCGA ATCT TCGCGGCTTTTTTAGG TTTGCATTCAGCTTT TERM 3334 3130901 - 3130933 + r 100 -14.4 -2.85621 | gap 1, opp_overlap 3130908, overlap 3130899 3130908 CAATCTTTACGCACA C-AAAAAAGCCGCGA ATCT TCGCGGCTTTTTTAG GTTTGCATTCAGCTT TERM 3335 3130908 - 3130925 + r 100 -12.7 -5.22039 | opp_overlap 3130908, overlap 3130901 3130899 TACGCACACAAAAAA GCCGCGA ATCT TCGCGGC TTTTTTAGGTTTGCA TERM 3336 3130925 - 3130908 - R 100 -12.7 -5.38047 | opp_overlap 3130901 3130899 3130908 TACGCACACAAAAAA GCCGCGA ATCT TCGCGGC TTTTTTAGGTTTGCA Sde_2478 3132540 - 3130966 - | cyclic nucleotide-binding domain-containing protein TERM 3337 3132584 - 3132571 - R 71 -6.7 -4.18506 | TTATTTTTAAAATAA CCTAG CTAC CTAGG TGTACCGTTAAACGC Sde_2479 3133202 - 3132678 - | TonB-like TERM 3338 3133855 - 3133838 - g 72 -2.7 -5.09173 | overlap 3133839 GAAGACTTTAAAAAA GGTGT TAACAAAC ACACC AACACTTCGTATTTC Sde_2480 3133535 - 3134092 + | Acyl-CoA hydrolase-like TERM 3339 3134507 - 3134522 + G 72 -2.6 -4.96996 | gap 1 CAATTATTGGCACAT GCAT-TG GCA CATATGC TTTATTTTGTTTGCG Sde_2481 3134188 - 3134694 + | hypothetical protein TERM 3340 3134919 - 3134909 - g 71 -6.8 -4.17048 | CTTTGTGCAAAATAA TGGC TAT GCCA CCGCAAACGAATAGC Sde_2482 3134761 - 3135279 + | hypothetical protein TERM 3341 3136130 - 3136108 - g 75 -6.3 -4.42386 | GCCCGATGTACAAAA GGCTGTAAA CCGTT TTAACAGCC CGCAACAGGTTGGCG Sde_2483 3135518 - 3136972 + | coproporphyrinogen III oxidase TERM 3342 3137020 - 3136992 - T 100 -16.1 -2.53581 | overlap 3136981 3136979 3136977 TATATGGCTAACTTA CATGTGACAGCGC CTT ACGCTGCCACATG CACAAGCCATTACTT Sde_2484 3137443 - 3137030 - | putative TonB system transport protein ExbD2 TERM 3343 3137642 - 3137628 - R 100 -11.4 -5.64274 | opp_overlap 3137628 GCAGGCATAAAAAAA GCAGCC ATT GGCTGC TTTTTGGGGTAGCTT TERM 3344 3137628 - 3137642 + r 100 -11.4 -4.63184 | opp_overlap 3137628 GCAGGCATAAAAAAA GCAGCC ATT GGCTGC TTTTTGGGGTAGCTT Sde_2485 3138094 - 3137669 - | phospholipid/glycerol acyltransferase TERM 3345 3138044 - 3138020 - G 70 -4.9 -4.41137 | opp_overlap 3138025, overlap 3138022 3138025 GATAAGCATAATAAA CACAACGTCCA GCA TGGGCGTTAAG TCGATTTCTGAATTA Sde_2486 3139264 - 3138419 - | peptide chain release factor 3 TERM 3346 3139344 - 3139323 - R 100 -12.3 -3.76778 | AAAACGTAGCAATAA TCGAACCCG CCAG CGGGCTCGA TATAGGAATAAATAC TERM 3347 3139424 - 3139400 - R 75 -5.6 -4.7078 | opp_overlap 3139399 3139400, overlap 3139402 GTAATGAGTTAAAAA CCGCCGTAGC TTTGC GCTAGGGCCG ATATTTCGCTGGCCG Sde_2487 3140169 - 3139393 - | transcriptional regulator KdgR Sde_2488 3144094 - 3140765 - | ribosomal-protein-alanine acetyltransferase TERM 3348 3141013 - 3140985 - G 95 -12.6 -4.11216 | opp_overlap 3140986 TCGTTATTTGCAAAA GCCTCGTTTAAC GACGT ATTAAACGAGGC GTGAGCATTGAGAAG TERM 3349 3141150 - 3141164 + g 73 -4.2 -4.77567 | overlap 3141152 TCCACCTTTACCACT TGCGGT TCA ACCGGA TTTTCTTCTGCAGGT TERM 3350 3142145 - 3142158 + g 74 -8.1 -3.91897 | overlap 3142143 GGCATTATCTACCGG CAGGC AACT GCCTG TTTCTACATGCACAA TERM 3351 3144036 - 3144048 + g 77 -3.4 -5.11613 | opp_overlap 3144026 3144036 GAAAGCAGTAAAAAC CACT GAATA AGTG TTTTTTGGATACTGT Sde_2489 3145250 - 3144087 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like TERM 3352 3144468 - 3144483 + g 74 -10.4 -3.19449 | AGCTATACATTCCAC GTGGCC GTTG GGCCAC TTGATGACATCTTTG TERM 3353 3145396 - 3145371 - R 93 -11.1 -4.14397 | AGCCTAGAAAGCAAA GCCCGCAGCGT AAAA ACGCCACGAGC CTTAAATTGGGAGTG Sde_2490 3147129 - 3145429 - | 2-isopropylmalate synthase TERM 3354 3146721 - 3146740 + g 75 -10 -3.54475 | opp_overlap 3146720 CAGTTCGCAACTCAC CGCCACTG TTAC CAGTGGTG TTATCTAATGCCGAA Sde_2491 3147486 - 3148643 + | AraC family transcriptional regulator TERM 3355 3148714 - 3148681 - f 100 -12.6 -5.63517 | opp_overlap 3148681 GCGGCAAATAAAAAA TGCCTTTACGGCAT ATATCA ATGCGGTAAAGGCA CAAGCTCACCTAACA TERM 3356 3150161 - 3150138 - g 83 -13.2 -3.19246 | gap 1 CGAATGGCAATTTAA GGTGG-GCGCT CTC AGCGCACCACC CCCAAGCTCAAAATT TERM 3357 3150700 - 3150682 - g 90 -13.2 -3.53091 | AGCGCTGCGCTTAAA GCACCACA CAA TGTGGTGC ACGGTATACAAATAC Sde_2492 3148933 - 3150918 + | ExsB Sde_2493 3151272 - 3150943 - | hypothetical protein Sde_2494 3151734 - 3153566 + | hypothetical protein TERM 3358 3153665 - 3153688 + T 100 -13.2 -5.93252 | TGCAGCATTCTTGCG CGCGGCTTAG GTTT CTAAGTCGCG TTTTTTGTTTTTGGC Sde_2495 3154923 - 3153784 - | AraC family transcriptional regulator TERM 3359 3154401 - 3154386 - G 79 -9 -4.07124 | opp_overlap 3154386 CAGCACCCATAGAAA CAGCAG AAAA CTGCTG TTTTAATCGCAATTG TERM 3360 3154386 - 3154401 + g 83 -9 -4.2679 | opp_overlap 3154386 CAGCACCCATAGAAA CAGCAG AAAA CTGCTG TTTTAATCGCAATTG TERM 3361 3154609 - 3154595 - G 82 -5.7 -5.1615 | GGAATAGGTAAAAAA TAGGC GATGT GCCTA CGCGCGATGATTGCG TERM 3362 3154612 - 3154624 + g 80 -5.5 -4.99947 | GGCGATGTGCCTACG CGCGA TGA TTGCG TTTTCTTTGGTTAGG Sde_2496 3155398 - 3155015 - | glyoxylase I family protein TERM 3363 3155077 - 3155063 - G 72 -2.8 -5.00616 | opp_overlap 3155052 GGGGTCTTTAAAAAA GGTATA TTT TTTACC GGTAAACTCATCAAT TERM 3364 3155471 - 3155491 + r 100 -11.9 -5.08601 | opp_overlap 3155471 TCGCGCATAAAAAAA CCCCGAAAT GGG GTTTCGGGG TTTTTATTAGGGTAA TERM 3365 3155491 - 3155471 - R 100 -11.2 -5.60993 | opp_overlap 3155471 TCGCGCATAAAAAAA CCCCGAAA TGGGG TTTCGGGG TTTTTATTAGGGTAA Sde_2497 3158782 - 3155564 - | exo-1,4-beta-glucosidase TERM 3366 3155674 - 3155691 + g 73 -4.2 -4.78753 | overlap 3155684 CTTTAGGCAATACGC CGTTTT CATCTA AAAACG TTTTATTGATATTCA TERM 3367 3156131 - 3156145 + g 79 -2.8 -5.38054 | overlap 3156128 ATCCACATTACCTTG CTGG ATACGCG CCAG TTTTTCTTTGTGGCG TERM 3368 3158536 - 3158551 + g 76 -4.7 -4.80882 | ATTGAATTTCTGGCT GTAGG ATTTGC CCTAC TTTTTGCTCTAGCGT Sde_2498 3160470 - 3158965 - | tryptophan halogenase, putative Sde_2499 3162509 - 3160485 - | putative alpha-glucosidase TERM 3369 3161356 - 3161342 - G 75 -2.9 -5.22312 | AGTTATACCAAAAAA GTAAA CCCAC TTTAC GCTCTTTGGCATAGG TERM 3370 3162666 - 3162609 - R 100 -12.8 -3.85698 | gap 1, opp_overlap 3162621 3162624, overlap 3162618 3162621 3162624 3162664 TTTTTTGCGTATAAA GCCCACAAACTAC-AACGCCACGGTAG TAAGC CTACCGTGGCGTTAGTTTATAGTAGGC CCGTACCACAGGCCA TERM 3371 3162654 - 3162618 - R 90 -11.1 -3.96291 | gap 2, opp_overlap 3162621 3162624, overlap 3162609 3162621 3162624 TATAAAGCCCACAAA CTACAACGCCACGGTAG TAAGC CTACCGTGGCGT--TAG TTTATAGTAGGCCCG TERM 3372 3162621 - 3162654 + r 100 -16.2 -3.96148 | gap 1, opp_overlap 3162621 3162618 3162609 3162624, overlap 3162624 AAAGCCCACAAACTA C-AACGCCACGGTAG TAAGC CTACCGTGGCGTTAG TTTATAGTAGGCCCG TERM 3373 3162653 - 3162621 - R 100 -18.6 -3.03034 | opp_overlap 3162621 3162624, overlap 3162618 3162609 3162624 AAAGCCCACAAACTA CAACGCCACGGTAG TAAGC CTACCGTGGCGTTA GTTTATAGTAGGCCC TERM 3374 3162650 - 3162624 - R 100 -18.1 -3.64915 | opp_overlap 3162621 3162624, overlap 3162621 3162618 3162609 GCCCACAAACTACAA CGCCACGGTAG TAAGC CTACCGTGGCG TTAGTTTATAGTAGG TERM 3375 3162624 - 3162650 + r 100 -18.1 -3.63228 | opp_overlap 3162624 3162621 3162618 3162609, overlap 3162621 GCCCACAAACTACAA CGCCACGGTAG TAAGC CTACCGTGGCG TTAGTTTATAGTAGG TERM 3376 3162680 - 3162664 - R 71 -10.1 -2.63596 | overlap 3162609 CGTTAGTTTATAGTA GGCCCGT ACC ACAGGCC ACAGCTAGTTGGATT Sde_2500 3165635 - 3162714 - | Holliday junction DNA helicase RuvB TERM 3377 3164039 - 3164058 + g 70 -2.1 -4.9218 | AGCCATTTAGGTAAC CCTCG CCAATCCAAT CGAGG TTTTTCTGCTCGATG TERM 3378 3165290 - 3165307 + g 77 -11.3 -3.14132 | opp_overlap 3165287 TTACTAATGACACTT CGGCAGA TAGA TCTGCCG TTGATAACACAACAG TERM 3379 3165491 - 3165508 + g 70 -4.9 -4.4017 | gap 1, opp_overlap 3165494, overlap 3165494 TATCTTGCAAGCTTA CAA-CGAC GCC GTCGCTTG TTTTATGCCAATTAA TERM 3380 3165596 - 3165612 + g 79 -2.9 -5.30616 | TGGCCGCGCCGGTGA GCAATTG CCC CAGTCGC TTTTTGTTTAAATAA Sde_2501 3167411 - 3165702 - | DNA recombination protein, RuvA TERM 3381 3166261 - 3166240 - G 75 -9.5 -3.54129 | opp_overlap 3166238 3166240 TATAGCTCGCCGAAA TGAGCGATG GTTT CATCACTCA TATTCTGTGCACCTA TERM 3382 3166377 - 3166360 - G 89 -4.1 -5.78622 | opp_overlap 3166371, overlap 3166371 GTATCCCAAAAAAAA CGAGCAA AAGG TTGGTCG TTGCCAATTTCTGCC TERM 3383 3166595 - 3166615 + g 91 -6.2 -5.49729 | overlap 3166591 GCAGTGCAACATTGA CGTACAAC GGCAG GTTGTATG TTTTTTTACCTGCTT TERM 3384 3167001 - 3167028 + g 80 -6.2 -4.74706 | gap 1, overlap 3167004 ATCATCCAACTTCAC CCACGCTGGCGCA TAG TGCGGC-GCGTTG TTTTTCCATGTTGCA TERM 3385 3167004 - 3167025 + g 75 -6.5 -4.47118 | gap 1, overlap 3167001 ATCCAACTTCACCCA CGCTGGCGCA TAG TGCGGC-GCG TTGTTTTTCCATGTT TERM 3386 3167588 - 3167550 - R 100 -10.4 -4.85599 | gap 1, opp_overlap 3167577 3167578, overlap 3167552 3167577 GCCACCTGATAAAAA TAGCGCCCAGCATTCGT GATAAT ACGAGTG-TGGGCGCCA CAATATTTGCCCAAT TERM 3387 3167586 - 3167552 - R 90 -10.8 -4.05067 | gap 1, opp_overlap 3167577 3167578, overlap 3167550 3167577 CACCTGATAAAAATA GCGCCCAGCATTCGT GATAAT ACGAGTG-TGGGCGC CACAATATTTGCCCA Sde_2502 3170691 - 3167785 - | crossover junction endodeoxyribonuclease RuvC TERM 3388 3169921 - 3169932 + g 70 -2.2 -4.95484 | CTGAACAGCCACATA TGCA CCGG TGCG TTTTCTTTCGTAGTC TERM 3389 3170352 - 3170374 + g 84 -10.6 -3.90112 | GACCCCGACCACCAT CAGCAGAGAA TAT TTCTCTGCCG TTTAATTCACCGCGA Sde_2503 3173290 - 3170879 - | hypothetical protein TERM 3390 3171964 - 3171987 + g 80 -9.6 -3.90291 | ACAGCGTCCAACCGC GTGCGCCAAA CACT TTTTGCGCAC TTTGCTTGCCGGGCT TERM 3391 3172039 - 3172073 + g 72 -10.7 -2.92267 | opp_overlap 3172031, overlap 3172037 CGAAAAACGGCAGCG CTGTCTCGCCCAAGT TGGTT ACTTGCGCGGGCCAG TAGTTCATTTGTAAG TERM 3392 3173405 - 3173386 - R 78 -7.2 -4.44608 | gap 1, opp_overlap 3173385, overlap 3173383 CCGATTCAAAAAGAA GGGT-AGAG CCT CTCTCACCC CCTTATTGTCATATA TERM 3393 3173533 - 3173518 - R 78 -5.4 -5.00616 | TTCTCGTCTAAAAAA CGCCAT GCAT ATAGCG CAAACAGTTAGTTCA TERM 3394 3173686 - 3173670 - R 100 -12.3 -5.60993 | TCGCCCATAAAAAAA GCCCCTT TAA AAGGGGC TTAAGCACGGACTAA Sde_2504 3175047 - 3173716 - | xylose isomerase TERM 3395 3174896 - 3174912 + g 72 -5.1 -4.55826 | opp_overlap 3174896 3174894 TGCCAGTAACATACA GAGAACT TAA AGTGCTC TTTTAATGTTTTGCC Sde_2505 3176584 - 3175100 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 3396 3175562 - 3175576 + g 72 -5.6 -4.42062 | opp_overlap 3175557 CACTACTAAGCCTTC GCTACC GAT GGGAGC TTTGTTTGCCACATC TERM 3397 3176949 - 3176925 - H 75 -5.7 -4.65305 | TAAAAAAACAAAGAA GGCTTCCAGTC AAT GAGTGAAAACC TAGATAAAGCACCCA Sde_2506 3176937 - 3177674 + | acetohydroxy acid isomeroreductase Sde_2507 3177816 - 3178892 + | DNA-directed DNA polymerase TERM 3398 3179362 - 3179352 - g 72 -8.2 -3.7795 | overlap 3179343 3179342 3179353 GCAAAGGCCACTAAA GCGG CAG CCGC TGCTGCTAAAAAAGC TERM 3399 3179386 - 3179376 - g 85 -6.8 -5.00616 | opp_overlap 3179364 3179379, overlap 3179377 3179379 GCTGCTGCTAAAAAA GCAG CTT CTGC AAAAGCTAAATTAAA TERM 3400 3179479 - 3179463 - g 83 -6.5 -5.03145 | CAAGCCGCTAAAAAA GCTGCAG ATA CTGAAGC CGCAGCTCTAAAGGC TERM 3401 3179635 - 3179625 - g 75 -3.2 -5.1925 | overlap 3179631 GCAGAAGCCAAAAAA GCAA AAG CTGC AGCAGCTAAAGAAAA TERM 3402 3179641 - 3179631 - g 82 -6.8 -4.86862 | overlap 3179625 GCCAAAAAAGCAAAA GCTG CAG CAGC TAAAGAAAAAGCAGC TERM 3403 3179674 - 3179652 - g 89 -6.2 -5.30616 | GCAGCTAAAGAAAAA GCAGCAGC GAAAAAA GCCGCCGC GAAAGAGAAATTGGC TERM 3404 3179839 - 3179817 - g 78 -4.8 -4.98531 | GCGGCAAAGCAAAAA GCAGCAGC GAAAAAA GCTACCGC CAAAAAGCCTGCAGT Sde_2508 3179214 - 3179978 + | hypothetical protein TERM 3405 3180017 - 3179996 - T 73 -10.1 -2.96979 | AGTAGAAGCTAGATA TGGCGGTGC CTTT GCACCGCTA ATCGCCCTGCCAGTC TERM 3406 3180020 - 3180069 + T 95 -5.8 -5.64274 | CTTTGCACCGCTAAT CGCCCTGCCAGT-CGGCCAAAAGA TTAG TCTTTAG-CTGTATTCGCGGGGCG TTTTTTTATCCGTAA Sde_2509 3180654 - 3180043 - | TonB-dependent receptor Sde_2510 3181351 - 3180680 - | acetolactate synthase small subunit TERM 3407 3181206 - 3181190 - G 71 -7.9 -3.97088 | opp_overlap 3181189 TTTCACAATAGGAAA CTCCCCC GAA GGTGGAG CTGTAATCATAACGG TERM 3408 3181493 - 3181475 - R 71 -9.5 -2.96692 | TATTAGTAGGAGATA GGCGGCC GGTAG AGCCGCC AAAAGACCGAGCCTT Sde_2511 3182199 - 3181507 - | acetolactate synthase large subunit biosynthetic type TERM 3409 3181621 - 3181590 - G 85 -12.3 -3.35813 | opp_overlap 3181593, overlap 3181591 CTGTATTCCAATTAA CCAGCAAGCGCGC CAGTGC ACGCGCCTGCTGA TCTAAAGCTTCGAGC TERM 3410 3181620 - 3181591 - G 83 -13.6 -2.61274 | opp_overlap 3181593, overlap 3181590 TGTATTCCAATTAAC CAGCAAGCGCGC CAGTGC ACGCGCCTGCTG ATCTAAAGCTTCGAG Sde_2512 3182790 - 3184025 + | periplasmic protein TonB links inner and outer membranes-like TERM 3411 3184040 - 3184069 + T 93 -12.3 -3.04398 | opp_overlap 3184046, overlap 3184046 AAAAACATTCTTCAT AAAAAAGGGCCTA TATT TAGGCCCTTTTTA GTTTTAAACAACGCA TERM 3412 3184063 - 3184046 - T 100 -11.3 -5.24531 | opp_overlap 3184040 3184046 ATTCTTCATAAAAAA GGGCCTA TATT TAGGCCC TTTTTAGTTTTAAAC TERM 3413 3184046 - 3184063 + T 100 -11.3 -5.0925 | opp_overlap 3184046, overlap 3184040 ATTCTTCATAAAAAA GGGCCTA TATT TAGGCCC TTTTTAGTTTTAAAC Sde_2513 3184651 - 3184091 - | hypothetical protein Sde_2514 3184785 - 3186257 + | hypothetical protein TERM 3414 3187001 - 3186969 - g 77 -9.2 -3.85817 | gap 1, overlap 3186970 AGCCTGTCGCAGAAA CGTAGAAG-CCGCCT TTTT AGGCGGGCTACTACA AGATATAGGGCGACC TERM 3415 3187000 - 3186970 - g 72 -10.5 -2.91276 | gap 1, overlap 3186969 GCCTGTCGCAGAAAC GTAGAAG-CCGCCT TTTT AGGCGGGCTACTAC AAGATATAGGGCGAC TERM 3416 3187116 - 3187100 - g 100 -9.5 -5.24129 | CCCTGCTAGAAAAAA CATTCTG TCG CAGAATG AGCATTACCGTGGTT Sde_2515 3186523 - 3187404 + | putative signal transduction protein TERM 3417 3187586 - 3187574 - g 77 -3.3 -5.10163 | AACCCTAAAAGAAAA TGCGC TGC GCGTA AAAAACATGCGCTCC TERM 3418 3188516 - 3188503 - g 72 -3.1 -4.91712 | CTCAAGCCAGAAAAA CACAC GGCG ATGTG CTGGTAGGCAAAGCC Sde_2516 3187401 - 3188798 + | soluble pyridine nucleotide transhydrogenase Sde_2517 3189940 - 3188855 - | hypothetical protein TERM 3419 3189905 - 3189893 - G 74 -5.5 -4.61648 | AACAACAATAACAAA CGTAG CCG CCACG AGTAAAAACCGAGCG Sde_2518 3190628 - 3190023 - | pseudouridine synthase, RluD Sde_2519 3192236 - 3190653 - | peptide chain release factor 3 TERM 3420 3191602 - 3191615 + g 76 -8.1 -4.09556 | AATGCATCGGCTTCT GGGCT ATTT AGCCC TTTAATTTGGGTATC TERM 3421 3192953 - 3192932 - g 72 -8.7 -3.72576 | CGGCCTTGCAGCAAA CGGAACGTT TAAC AACGTGCCG AATAATTCAAGCTTC Sde_2520 3192510 - 3193430 + | NAD+ synthase TERM 3422 3193499 - 3193515 + T 100 -10.8 -5.29782 | opp_overlap 3193496 AAAATAACACCATGA GCCCGC ACCTA GCGGGC TTTTTTATAGCTGTA Sde_2521 3193999 - 3193520 - | histidine kinase TERM 3423 3193681 - 3193669 - G 84 -4.7 -5.42259 | GCACCTCTAAAAAAA GCCGC TCG GCTGC AACCAGATACTTATC Sde_2522 3194859 - 3194017 - | Fis family transcriptional regulator TERM 3424 3194356 - 3194379 + g 75 -6.7 -4.43815 | gap 1, overlap 3194358 3194359 TTCTGCACGCGGTAG GCTTTGCGGC AGCTG GCCGC-AGGC TTTTAATATATTGGT Sde_2523 3196438 - 3194891 - | 2-isopropylmalate synthase Sde_2524 3197576 - 3196506 - | quinolinate synthetase TERM 3425 3197659 - 3197678 + r 73 -8.6 -3.60792 | gap 1, opp_overlap 3197659 TGCGCAAATAAAAAA GGGGACCAC TAT GTG-TCCCC TTTAGAAATTCCCCA TERM 3426 3197678 - 3197659 - R 100 -8.6 -5.63517 | gap 1, opp_overlap 3197659 TGCGCAAATAAAAAA GGGGACCAC TAT GTG-TCCCC TTTAGAAATTCCCCA TERM 3427 3197791 - 3197811 + r 75 -5.4 -4.90906 | TCGCTCGGCTCGAAC CGGTTCTC ACCCA GATAACCG TTTTTAATCTTCTGC Sde_2525 3199057 - 3198380 - | ExsB protein TERM 3428 3198882 - 3198894 + g 72 -5.5 -4.40804 | opp_overlap 3198865 TGCACGACTTTATGT TGCGC AAC GTGCA TTTTATCGGATACTC Sde_2526 3199736 - 3199086 - | putative radical activating enzyme TERM 3429 3199358 - 3199372 + g 71 -7 -4.13767 | GGTTTTTATCTTGCT CGCCAG AAG CCGGCG TTTTAAGGTCGAGCA Sde_2527 3200586 - 3199819 - | hypothetical protein TERM 3430 3200119 - 3200131 + g 72 -2.6 -4.93898 | TAGGTGCTGCTTTAG CGCG ATAAC TGCG TTTTTGTAATCCTGT TERM 3431 3200753 - 3200733 - R 100 -9.7 -5.72622 | opp_overlap 3200733 TCCACAAACAAAAAA CCCGCAG TTTTACG CTGCGGG TTTTTATAAGTTTCA TERM 3432 3200733 - 3200753 + r 100 -10.4 -4.94992 | opp_overlap 3200733 TCCACAAACAAAAAA CCCGCAGT TTTAC GCTGCGGG TTTTTATAAGTTTCA Sde_2528 3201292 - 3200801 - | peptidoglycan-associated lipoprotein TERM 3433 3201259 - 3201249 - G 72 -3.2 -5.04733 | CAACCAGAAACAAAA GCAA ATA CTGC TACTAACGACAATAA tolB 3202675 - 3201338 - | translocation protein TolB TERM 3434 3201515 - 3201546 + g 72 -10.2 -2.78384 | opp_overlap 3201512 TTCATCTAACCACGT TTCAGTCAGGATAC GCAT GTCACCTGACTGAA TGTCCTGCCAAGCAA Sde_2530 3203433 - 3202672 - | LytB protein Sde_2531 3203880 - 3203452 - | biopolymer transport protein TERM 3435 3203626 - 3203636 + g 74 -6.8 -4.25056 | GGTTATGTCTTTCAG CTCG CGG CGAG TTTCTTGATCGCCTC Sde_2532 3204582 - 3203887 - | peptidase A8, signal peptidase II TERM 3436 3204214 - 3204188 - G 72 -3 -5.00884 | ACGCTGGCTAAAAAA GGCAAAAACACT TCT AGTTTTTCTTCC TCTCGAGCCATAGCT ruvB 3205899 - 3204865 - | Holliday junction DNA helicase B Sde_2534 3206546 - 3205923 - | Holliday junction DNA helicase subunit RuvA Sde_2535 3207089 - 3206568 - | virulence factor MVIN-like TERM 3437 3206852 - 3206866 + g 74 -5.6 -4.62783 | CTTGCCCCAGCTTGA GTGCTG AGC CCGCAC TTTTTGCCATAAATA Sde_2536 3207275 - 3207724 + | CBS Sde_2537 3209102 - 3207732 - | hypothetical protein TERM 3438 3209307 - 3209282 - R 100 -19.1 -5.31275 | opp_overlap 3209282 GCCGATCACAAAAAA GCCCGCTTAGG GTAA CCTAAGCGGGC TTTTGATATTAGAAG TERM 3439 3209282 - 3209307 + r 100 -19.1 -4.4261 | opp_overlap 3209282 GCCGATCACAAAAAA GCCCGCTTAGG GTAA CCTAAGCGGGC TTTTGATATTAGAAG TERM 3440 3209616 - 3209632 + r 71 -9.3 -3.01204 | opp_overlap 3209601 GGTTGAGGTACTCAC CCGTCGC CTT GCGTCGG TGTACTTATCCTTTT TERM 3441 3211405 - 3211419 + r 75 -5.7 -4.67011 | overlap 3211414 ACAGGAAACCTTGAT CTTCC GGCGG GGAAG TTTTTCACTCCCCTT TERM 3442 3215558 - 3215541 - R 100 -8.4 -5.4251 | opp_overlap 3215541 TCGACACACAAAAAA GCCGCT TACAAG AGCGGC TTTTATAGGTAATTA TERM 3443 3215541 - 3215558 + r 93 -9.1 -4.44915 | opp_overlap 3215541 TCGACACACAAAAAA GCCGCTT ACAA GAGCGGC TTTTATAGGTAATTA Sde_2538 3216463 - 3215588 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 3444 3216526 - 3216543 + r 75 -8.3 -3.78953 | opp_overlap 3216527, overlap 3216527 TGCCACAACAAAAAA ACGCGGC CTTA GCCGCGC TTTAATGGTACCAAT TERM 3445 3216542 - 3216527 - R 100 -11.8 -5.88565 | opp_overlap 3216526 3216527 GCCACAACAAAAAAA CGCGGC CTTA GCCGCG CTTTAATGGTACCAA TERM 3446 3216527 - 3216542 + r 83 -11.8 -2.87051 | opp_overlap 3216527, overlap 3216526 GCCACAACAAAAAAA CGCGGC CTTA GCCGCG CTTTAATGGTACCAA Sde_2539 3217583 - 3216567 - | ketol-acid reductoisomerase TERM 3447 3217512 - 3217529 + g 79 -4.1 -5.16572 | GTGACCTTGTGAACC GTAACCA ATGA TGGCTAC TTTTTTGCCTTGGAT Sde_2540 3217710 - 3218594 + | DNA-binding transcriptional regulator IlvY TERM 3448 3218683 - 3218631 - T 84 -6.4 -5.03994 | overlap 3218676 CCCCACATACAAAAA GCCCCTGCCTATAGGTGC-CGCTCTA GGA TCGAGCTTGCAA-TATAAGCAAGGGC TTGCACTGTGAGCTT TERM 3449 3218695 - 3218715 + T 81 -11.9 -2.52896 | GGGCTTGCACTGTGA GCTTAGCCT TGT GGGCTAAGC TCCATTAAAGAATAG Sde_2541 3221298 - 3218746 - | hypothetical protein Sde_2542 3224521 - 3221375 - | TonB-dependent receptor TERM 3450 3222362 - 3222351 - G 76 -4.4 -4.99645 | ACTTCAGAAACAAAA GCAA TTTT TTGC CAATCGTCATAACCA TERM 3451 3224595 - 3224621 + r 72 -7.9 -3.75153 | gap 1 ATCTATGCCTCAGGC CGCC-GACGCGC CAAA GCGTGCCCGGCG TTTGGGTTACGCGAC TERM 3452 3224740 - 3224722 - R 100 -11 -5.626 | opp_overlap 3224721 TAGCTTAGAAAAAAA GCGGCTAC CTA GTAACCGC CTAAATTTAAGACCT TERM 3453 3225060 - 3225026 - R 100 -13.7 -3.88442 | TAAAAGAGGAGGAAA TTAGCGCCAATGACC TCTAT AGCCATTGGCGCCAA CTCAAAGTGATTAGA ilvH 3225562 - 3225071 - | acetolactate synthase 3 regulatory subunit TERM 3454 3225183 - 3225164 - G 72 -5 -4.59511 | AACAGCCTGGAAAAA CGAGTCAA GCTT TTCACTCG CACCCGTTATTTGAA Sde_2544 3227328 - 3225562 - | acetolactate synthase 3 catalytic subunit Sde_2545 3227738 - 3228721 + | putative mRNA-binding protein Sde_2546 3228871 - 3229314 + | hypothetical protein TERM 3455 3229347 - 3229362 + T 100 -11.8 -5.30616 | opp_overlap 3229347 GCTCACCACAAAGAA GCCCGC AGAC GCGGGC TTTTTATTTGACTGA TERM 3456 3229362 - 3229347 - T 100 -11.8 -4.11183 | opp_overlap 3229347 GCTCACCACAAAGAA GCCCGC AGAC GCGGGC TTTTTATTTGACTGA Sde_2547 3231285 - 3229450 - | translation initiation factor SUI1 TERM 3457 3231865 - 3231839 - R 72 -7.2 -3.94333 | overlap 3231840 TAGGAAGAGAGGAAA GCGGGGCTCG TGCTATG CGAACCCCGG CAAGCGAGCAGCCAT TERM 3458 3231864 - 3231840 - R 79 -10.7 -2.95877 | overlap 3231839 AGGAAGAGAGGAAAG CGGGGCTCG TGCTATG CGAACCCCG GCAAGCGAGCAGCCA Sde_2548 3234510 - 3231880 - | ClpB protein TERM 3459 3233032 - 3233049 + g 70 -9.1 -3.40299 | gap 1, opp_overlap 3233030 3233031 CATGCGCCCTAAATC GCCAGCGC GAC GCGC-GGC TTCTAGGTCTAATCG TERM 3460 3233206 - 3233217 + g 76 -4.4 -5.03145 | TCGTTCTTTAGAGGC GATG TCTT CATC TTTTTTAACCGCTTC Sde_2549 3234793 - 3235458 + | hypothetical protein TERM 3461 3235496 - 3235519 + T 74 -9.5 -3.29511 | opp_overlap 3235494 3235491 3235487, overlap 3235497 CATTAAGCAACTATG CGGCCAGCC ATATTA GGCTGGCCA TTCTGCCGCACTGCC TERM 3462 3235497 - 3235518 + T 91 -13 -2.57564 | opp_overlap 3235494 3235491 3235487, overlap 3235496 ATTAAGCAACTATGC GGCCAGCC ATATTA GGCTGGCC ATTCTGCCGCACTGC Sde_2550 3236252 - 3235491 - | hypothetical protein Sde_2551 3237210 - 3236245 - | ribosomal large subunit pseudouridine synthase D TERM 3463 3236377 - 3236353 - G 79 -11.5 -3.33399 | overlap 3236348 GTGAACCAAACTTAA TCGCCAAGC GTGTAGA GCTTGGCGA GGGAAGGCTTCGGCA TERM 3464 3236691 - 3236681 - G 71 -6.8 -4.07568 | TCTTTTGCTGCAAAA GTGC CAT GCAC TACAGCTTGGTAATG Sde_2552 3237391 - 3238296 + | Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 3465 3238311 - 3238367 + T 100 -37.3 -3.5525 | opp_overlap 3238311 3238315 3238331, overlap 3238315 3238331 AAATCACACAAGTAA TAAACTTCACCCATAAAAAAGGCCAGA ATT TCTGGCCTTTTTTATGGGTGAAGTTTA TTTAAACCCGTCTAT TERM 3466 3238367 - 3238311 - T 100 -37.3 -3.5275 | opp_overlap 3238311 3238315 3238331, overlap 3238315 3238331 AAATCACACAAGTAA TAAACTTCACCCATAAAAAAGGCCAGA ATT TCTGGCCTTTTTTATGGGTGAAGTTTA TTTAAACCCGTCTAT TERM 3467 3238363 - 3238315 - T 100 -33.7 -4.38203 | opp_overlap 3238315 3238311 3238331, overlap 3238311 3238331 CACACAAGTAATAAA CTTCACCCATAAAAAAGGCCAGA ATT TCTGGCCTTTTTTATGGGTGAAG TTTATTTAAACCCGT TERM 3468 3238315 - 3238363 + T 100 -33.7 -4.41616 | opp_overlap 3238311 3238315 3238331, overlap 3238311 3238331 CACACAAGTAATAAA CTTCACCCATAAAAAAGGCCAGA ATT TCTGGCCTTTTTTATGGGTGAAG TTTATTTAAACCCGT TERM 3469 3238331 - 3238347 + T 100 -12.3 -5.28176 | opp_overlap 3238315 3238311 3238331, overlap 3238315 3238311 TTCACCCATAAAAAA GGCCAGA ATT TCTGGCC TTTTTTATGGGTGAA TERM 3470 3238347 - 3238331 - T 100 -12.3 -5.28176 | opp_overlap 3238331 3238315 3238311, overlap 3238315 3238311 TTCACCCATAAAAAA GGCCAGA ATT TCTGGCC TTTTTTATGGGTGAA TERM 3471 3238468 - 3238493 + T 100 -11.3 -4.87626 | opp_overlap 3238467 3238466 TATGTCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTCCAC Sde_2553 3240252 - 3238630 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Sde_2554 3240385 - 3241971 + | sensor protein PilS TERM 3472 3242841 - 3242829 - g 80 -6.9 -4.58283 | GAACTCGTTCAAAAA GGCGA CTT CCGCC AAGATTTATTTTACA Sde_2555 3241971 - 3243350 + | two-component response regulator PilR Sde_2556 3243489 - 3244043 + | Tfp pilus assembly protein FimT-like TERM 3473 3244032 - 3244063 + T 100 -16.1 -4.23892 | opp_overlap 3244036 TCAGACGGCAGCCCA GTAAGGTGCTAGT AATTTA ACTAGCACCTTAC TTTTAGCTAATTACA TERM 3474 3244059 - 3244036 - T 79 -11.1 -3.16683 | opp_overlap 3244032 ACGGCAGCCCAGTAA GGTGCTAGT AATTTA ACTAGCACC TTACTTTTAGCTAAT Sde_2557 3244520 - 3244083 - | peptidase M50, putative membrane-associated zinc metallopeptidase Sde_2558 3249683 - 3244539 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3475 3246857 - 3246844 - G 74 -3.9 -4.98531 | TCGTCAAAGTAAAAA GATAA TACA TTATC AGCATCGGTGAGCTG Sde_2559 3250349 - 3249708 - | Tfp pilus assembly protein PilX-like Sde_2560 3251478 - 3250357 - | di-trans-poly-cis-decaprenylcistransferase TERM 3476 3250775 - 3250754 - G 93 -14.4 -3.32268 | overlap 3250768 3250769 GAACCATCCCCATAA GCGGCGGC AGAATA GCCGCCGC AAGACGTCGGGCCGC Sde_2561 3251950 - 3251480 - | ribosome recycling factor Sde_2562 3252567 - 3251953 - | uridylate kinase Sde_2563 3253670 - 3252735 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Sde_2564 3254167 - 3253712 - | ribosomal protein S2 Sde_2565 3254642 - 3254190 - | signal peptidase II Sde_2566 3257511 - 3254713 - | isoleucyl-tRNA synthetase TERM 3477 3255276 - 3255266 - G 76 -8.2 -4.14193 | opp_overlap 3255268, overlap 3255262 3255267 ACAATATGATACAAA GCGC TTT GCGC AGAGCGGCGCGCATG TERM 3478 3255357 - 3255375 + g 71 -3.8 -4.78764 | opp_overlap 3255360, overlap 3255360 AGCCACCCATTTCTA CAACACAG AAG TTGTGTAG TTTTTGATAGATTTG TERM 3479 3257427 - 3257457 + g 72 -8.2 -3.72576 | overlap 3257432 GCTGCCATTGTTTTA GCATGCCTGGCTCG CGC TGAGCGAGGTTTGC TTTCATGGCAAAAGA TERM 3480 3257432 - 3257452 + g 73 -7.5 -4.10552 | overlap 3257427 CATTGTTTTAGCATG CCTGGCTCG CGC TGAGCGAGG TTTGCTTTCATGGCA Sde_2567 3258535 - 3257558 - | riboflavin kinase / FMN adenylyltransferase Sde_2568 3260259 - 3258658 - | peptidase M24A TERM 3481 3260123 - 3260102 - G 72 -5.8 -4.49364 | overlap 3260105 AAAGCCAAGAAGAAA GCACTGGC ATCGGG GCCAGCAC CAATATAACGGGCGA TERM 3482 3260349 - 3260322 - R 70 -7.6 -3.61268 | overlap 3260326 GAGTTAACGGGCAAA TCAAGGCGCGGT GTTA ACCGCACCAAGA AGATTAACTACTCGA TERM 3483 3260345 - 3260326 - R 89 -11.4 -3.52918 | overlap 3260322 TAACGGGCAAATCAA GGCGCGGT GTTA ACCGCACC AAGAAGATTAACTAC Sde_2569 3260872 - 3260357 - | metal dependent phosphohydrolase Sde_2570 3261092 - 3261784 + | OmpA family protein TERM 3484 3261827 - 3261845 + T 100 -13.1 -5.42259 | CTGCCTGACCGCTTT GCCCGGC ACAAC GCCGGGC TTTTTTTAGCGGTAA Sde_2571 3263072 - 3261867 - | endonuclease III/Nth TERM 3485 3262922 - 3262902 - G 70 -4.7 -4.47707 | GGCCATTAAAAATAA CCAGAGAGT CGC AATCTCTAG CAGGTTTTCGTTCAA TERM 3486 3263160 - 3263137 - R 70 -7.6 -3.73107 | opp_overlap 3263139 CCACGAAATGTTAAA TATTGCCAAT GCGC ATTAGCAATA AGTTGCGATTAATAA TERM 3487 3263208 - 3263193 - R 100 -11.8 -4.90917 | opp_overlap 3263193 AAAGGGAACGAAAAA GCGGGC CGTA GCCCGC TTTATTTAATCTGGA TERM 3488 3263193 - 3263208 + r 100 -11.8 -4.53602 | opp_overlap 3263193 AAAGGGAACGAAAAA GCGGGC CGTA GCCCGC TTTATTTAATCTGGA Sde_2572 3265145 - 3263232 - | hypothetical protein TERM 3489 3264887 - 3264829 - G 83 -13.6 -2.53119 | opp_overlap 3264882 3264886, overlap 3264826 3264828 AACTGCTCAGAAGAT GCTGCAGGTGCAGCCGCCTCTGGGGCTG GCG CCGCCGCAGGAGCGGCTGCCGGTTCAGC AGCAGGCGCATCAGC TERM 3490 3264886 - 3264914 + g 74 -10.2 -3.28765 | opp_overlap 3264829, overlap 3264882 GCGGCTGCCGGTTCA GCAGCAGGCGCA TCAGC TGCGCCCTCTGC TTCAATTTCAAATAT aceE 3267816 - 3265162 - | pyruvate dehydrogenase subunit E1 TERM 3491 3265324 - 3265307 - G 71 -6.9 -4.16842 | overlap 3265308 TCCACTTCGAAGAAA CCGCGCA ATTT CGCGCGA GTATCAGAGCGACCA TERM 3492 3265846 - 3265824 - G 72 -9.3 -3.64259 | opp_overlap 3265823 3265827 AACCATCGCGAATAA TTACAGCTA GCTCA TAGCTGTAA GTTGGGTCGTAGGTG TERM 3493 3268178 - 3268194 + r 85 -9.5 -4.17762 | overlap 3268168 AGACCGCTATTTATG GCATGTT TTA AACATGC TTCTTTTAGAAAATG TERM 3494 3268231 - 3268257 + r 74 -9.5 -3.36492 | gap 1 AGCGCCCGTTCTCTT CACCTGCAAACC CTTT GGTT-GCGGGTG TTGTAGCCTTGGCGA Sde_2574 3269534 - 3268464 - | succinyl-diaminopimelate desuccinylase TERM 3495 3268752 - 3268738 - G 72 -9.2 -3.54575 | overlap 3268736 TGGAAAAAACCAATA GCCGCC ACA GGCAGC GTTACAATAGCCGCG Sde_2575 3269788 - 3269531 - | molybdopterin cofactor biosynthesis MoaC region TERM 3496 3270442 - 3270461 + G 73 -4.2 -4.8622 | TGTACCCGGTGGCGT GGTGGGTA TTCA TACCGGCC TTTTTAATTACGCCG TERM 3497 3270928 - 3270918 - g 75 -3.2 -5.14965 | AGTTTTACGAAAAAA GCAC CGA GTAC GAGCTTGTTAAAATT Sde_2576 3270047 - 3271558 + | molybdopterin converting factor, subunit 1 Sde_2577 3273778 - 3271610 - | diguanylate cyclase/phosphodiesterase TERM 3498 3273986 - 3274000 + H 86 -10 -3.94402 | overlap 3273998 AATCAAAGCTTATGG CGCCAA TAT TTGGCG TTATTTACCGCTTCT Sde_2578 3274104 - 3274973 + | metallophosphoesterase Sde_2579 3275884 - 3274988 - | hypothetical protein TERM 3499 3275053 - 3275041 - G 73 -7.7 -4.14739 | opp_overlap 3275041 CTATCGATTCCAAAA CACTG CCA CAGTG CTTGCAGTGTTTGGC TERM 3500 3276039 - 3276004 - g 80 -9.8 -3.93782 | GCATCTAACAGCAAA CTCGTCTATTCCACCG ACAG CGGCAGAATAAAAGAG GATAAGCCACAGCAA Sde_2580 3275986 - 3276309 + | translation initiation factor 1 (eIF-1/SUI1) TERM 3501 3276879 - 3276890 + G 72 -5.8 -4.41206 | TCTGGCATTATGCAG CTGC GCGA GCAG TTTTATGAGCTGCTT Sde_2581 3276408 - 3276938 + | TonB-like TERM 3502 3276961 - 3276998 + T 100 -10.1 -4.60041 | opp_overlap 3276962 3276972, overlap 3276962 3276972 CGTCGCGTAGAGTGA ACACAAAAAAACCTACT CTTT AGTAGGTTTTTTTGTAA TTTTTGCAAATGGAT TERM 3503 3276997 - 3276962 - T 100 -15.8 -3.12351 | opp_overlap 3276962 3276961 3276972, overlap 3276972 GTCGCGTAGAGTGAA CACAAAAAAACCTACT CTTT AGTAGGTTTTTTTGTA ATTTTTGCAAATGGA TERM 3504 3276962 - 3276997 + T 100 -13.6 -3.35542 | opp_overlap 3276962 3276972, overlap 3276961 3276972 GTCGCGTAGAGTGAA CACAAAAAAACCTACT CTTT AGTAGGTTTTTTTGTA ATTTTTGCAAATGGA TERM 3505 3276987 - 3276972 - T 100 -7.6 -5.80817 | opp_overlap 3276962 3276961 3276972, overlap 3276962 GTGAACACAAAAAAA CCTACT CTTT AGTAGG TTTTTTTGTAATTTT TERM 3506 3276972 - 3276987 + T 100 -7.6 -5.77632 | opp_overlap 3276972 3276962, overlap 3276962 3276961 GTGAACACAAAAAAA CCTACT CTTT AGTAGG TTTTTTTGTAATTTT Sde_2582 3277599 - 3277048 - | TonB-like Sde_2583 3278455 - 3277856 - | ribonuclease H Sde_2584 3279652 - 3278486 - | Lipid-A-disaccharide synthase TERM 3507 3278798 - 3278766 - G 83 -10 -4.06786 | gap 1 AGCCAATATGAGAAA GCTGCCATATGGTAA GCAA TTACCATAGGGC-GC TTAAGCAACATAGCC TERM 3508 3279013 - 3278979 - G 79 -10.1 -3.8186 | gap 1, overlap 3278982 ATAATAATACGTAAA TTAGGCCGACCAGCAA AAGA TTGCTGAGCGGCC-AA CAGGAAACGCTCACA TERM 3509 3279011 - 3278982 - G 88 -14.3 -2.97802 | overlap 3278979 ATAATACGTAAATTA GGCCGACCAGCAA AAGA TTGCTGAGCGGCC AACAGGAAACGCTCA Sde_2585 3280450 - 3279674 - | UDP-N-acetylglucosamine acyltransferase Sde_2586 3280913 - 3280476 - | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase TERM 3510 3280955 - 3280970 + r 74 -6.1 -4.47686 | GTAATCAGTCTTTTT GCGCT TTTTGT AGCGC TTTAATTTTTTCTAC Sde_2587 3281969 - 3280944 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3511 3281871 - 3281844 - G 100 -12.8 -4.56775 | opp_overlap 3281849 ACTGTTCGCCAAAAA GGAAAGCGCG TTTTTACC CGCGCTTTCC AAAGGAGCAATACAC TERM 3512 3281993 - 3282006 + r 70 -5.3 -4.42062 | opp_overlap 3281993, overlap 3281984 TCTATGTAAATAGAA GCTAA TTAT TTAGC TTTGTTTAAAGCATC Sde_2588 3282504 - 3281998 - | hypothetical protein TERM 3513 3282593 - 3282575 - R 70 -6 -4.25848 | AACCCGCTACCAAAA GAGAACTG AAA CACTTCTC TCGAATCGAATTCAT Sde_2589 3285246 - 3282556 - | dihydrodipicolinate synthase subfamily protein TERM 3514 3284284 - 3284324 + g 70 -2 -5.02502 | gap 2, overlap 3284285 3284286 CTTTTCTGGAATACC TTCTACT-G-TAGCGTTGGT ATA ACCGGCGTTACCAAGTAGGG TTTTTATGTACTCTG TERM 3515 3284921 - 3284933 + g 72 -5.5 -4.53774 | overlap 3284922 TCGGTCATTACCTCT TCGAG CTG CTCGG TTTTAATTGCTTTGT Sde_2590 3286712 - 3285312 - | peptidase RseP TERM 3516 3286373 - 3286383 + g 73 -4.6 -4.8622 | opp_overlap 3286373 AAGCAATTAAAATAC GCTG CCA CGGC TTTTTACTTGAAAAC Sde_2591 3287922 - 3286744 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sde_2592 3288751 - 3287927 - | phosphatidate cytidylyltransferase Sde_2593 3289493 - 3288744 - | undecaprenyl pyrophosphate synthetase TERM 3517 3289280 - 3289255 - G 100 -10.5 -4.7878 | TAGCTATAAAACAAA CCCATTAAGGC TTCA ACCTCAATGGG TGGACGGCGCCAGTT TERM 3518 3289506 - 3289527 + r 78 -5.9 -4.87803 | CATGTAATTTCTCTA GGATCAAAT CTCC ATTAGATCC TTTTCTTTGGCGCTA Sde_2594 3290072 - 3289509 - | ribosome recycling factor TERM 3519 3289537 - 3289547 + g 76 -8.2 -4.1347 | AGATCCTTTTCTTTG GCGC TAA GCGC TTTATCTACTTCAGC pyrH 3290815 - 3290072 - | uridylate kinase TERM 3520 3290449 - 3290425 - G 70 -5 -4.44307 | gap 1, overlap 3290422 CAGAAAAAATAACAA CTTCGCC-GTT GTCT AGCAGGCGAAG CGCCTTGCGGCGGTC TERM 3521 3290900 - 3290867 - R 100 -19.8 -3.12668 | opp_overlap 3290874, overlap 3290874 CGCGAAAGTGTAACA GCAAAAAGGCGGGA GATGTA TCCCGCCTTTTTGC AAGGTGCGTCAATTA TERM 3522 3290874 - 3290893 + r 100 -10.7 -4.58395 | opp_overlap 3290867 3290874 GTGTAACAGCAAAAA GGCGGGA GATGTA TCCCGCC TTTTTGCAAGGTGCG TERM 3523 3290893 - 3290874 - R 100 -10.7 -4.87626 | opp_overlap 3290874, overlap 3290867 GTGTAACAGCAAAAA GGCGGGA GATGTA TCCCGCC TTTTTGCAAGGTGCG Sde_2596 3291809 - 3290937 - | translation elongation factor Ts (EF-Ts) TERM 3524 3291493 - 3291509 + g 70 -5.1 -4.41616 | overlap 3291481 GCCGCTACATCAGTA GCTTTAG TGT CGAAAGC TTTGTTTACAACGGT TERM 3525 3291643 - 3291656 + g 77 -3.8 -5.13521 | ACAACACCTTCAGCA GCAG TACGAT CTGC TTTTTTAGCTGCTTT TERM 3526 3291874 - 3291846 - R 90 -11.1 -3.95219 | opp_overlap 3291854, overlap 3291847 3291854 GTTAAATTTTAGAAA CTGAAAAAGGGGC ATG GCCCCTTTTTGAA ATACTGTTTACCCAA TERM 3527 3291873 - 3291847 - R 93 -12.4 -2.9665 | opp_overlap 3291854, overlap 3291846 3291854 TTAAATTTTAGAAAC TGAAAAAGGGGC ATG GCCCCTTTTTGA AATACTGTTTACCCA TERM 3528 3291866 - 3291854 - R 100 -10.5 -4.84529 | opp_overlap 3291854, overlap 3291847 3291846 TTAGAAACTGAAAAA GGGGC ATG GCCCC TTTTTGAAATACTGT TERM 3529 3291854 - 3291866 + r 100 -10.5 -4.63928 | opp_overlap 3291854 3291847 3291846 TTAGAAACTGAAAAA GGGGC ATG GCCCC TTTTTGAAATACTGT Sde_2597 3292718 - 3291978 - | SSU ribosomal protein S2P Sde_2598 3295097 - 3293022 - | PAS/PAC sensor signal transduction histidine kinase TERM 3530 3294956 - 3294942 - G 70 -10 -3.05022 | opp_overlap 3294944 3294946, overlap 3294945 TTCGTCAGAGAGATA CCACTG CGC CAGTGG CGCATCTATTTCATC TERM 3531 3294946 - 3294960 + g 79 -11.4 -3.31162 | opp_overlap 3294942 3294945, overlap 3294944 TCAGAGAGATACCAC TGCGCC AGT GGCGCA TCTATTTCATCATCA TERM 3532 3295556 - 3295532 - g 77 -3.5 -5.1615 | TCAACAGCGAAAAAA CTGGGCCCTAC AAA ATAGAAACCAG CAATAGCGAAAAAAC Sde_2599 3295348 - 3297810 + | hypothetical protein Sde_2600 3297829 - 3298506 + | response regulator receiver domain-containing protein Sde_2601 3298671 - 3299447 + | methionine aminopeptidase, type I TERM 3533 3300128 - 3300109 - g 100 -10.6 -4.88228 | ACCCAACATTAAAAA CGCGCCGG GCGG CCTGCGCG ATATACAAATGATTA TERM 3534 3300718 - 3300697 - g 72 -5.9 -4.49781 | AAAAGATCCAGAAAA CAACCGCAT GTTT ATGCAATTG TTTCAGCTGGATTAC TERM 3535 3301016 - 3301001 - g 72 -8.2 -3.74792 | CACGATATAGGCAAA GGCCGC GGCG GCGACC ACTCTCAGCTTGGCG glnD 3299450 - 3302152 + | PII uridylyl-transferase TERM 3536 3302160 - 3302138 - f 70 -2.6 -4.95155 | overlap 3302140 CTTAGAGTAGAAAAA GATTTGGCTC GAT AAGCCTAAGC TAGCAAACAACTAAC TERM 3537 3302789 - 3302769 - g 76 -4.7 -4.83615 | overlap 3302770 GAGCTGTTAGAAAAA CTTATTGGC CTC GCCGATAAA CACAATTTCATTATC TERM 3538 3302946 - 3302962 + G 74 -5.8 -4.63218 | gap 1 AAACGCTCGAACCTG CCCG-GC TTGC GCTCGGG TTTTGTTGCGGGCGA TERM 3539 3303254 - 3303266 + G 72 -4.7 -4.56775 | ACAAAACGTAACTGT GCTGC CCG GCCGC TTTTTAGCGCGCGAT Sde_2603 3302193 - 3303416 + | hypothetical protein TERM 3540 3303412 - 3303445 + F 73 -9.7 -2.981 | opp_overlap 3303406 3303412 3303410, overlap 3303411 CTCTATATACCAATA GCTAATCGCGAGT TAATCACC ACTAGCGATTAGC GTTTATCGGTTAACA TERM 3541 3303445 - 3303412 - f 74 -9.7 -3.22777 | opp_overlap 3303411 3303412, overlap 3303406 3303410 CTCTATATACCAATA GCTAATCGCGAGT TAATCACC ACTAGCGATTAGC GTTTATCGGTTAACA Sde_2604 3303473 - 3304156 + | endonuclease III Sde_2605 3304259 - 3304624 + | hypothetical protein Sde_2606 3304640 - 3305674 + | tetrahydrodipicolinate succinylase, putative TERM 3542 3305778 - 3305802 + F 77 -8.4 -3.93817 | opp_overlap 3305777 3305776 3305774, overlap 3305777 AAATTTGCAAACACT CGCCGACCGC AATCC GCTGCCGGCG TATTTTTAGCCTCTA TERM 3543 3306171 - 3306157 - g 76 -9.2 -3.83026 | opp_overlap 3306156 GCCGCCGACATGAAA GGCAGC CTG GCCGCC ATGATTACCGCATGC Sde_2607 3305833 - 3306981 + | succinyl-diaminopimelate desuccinylase Sde_2608 3307023 - 3307505 + | GTP cyclohydrolase subunit MoaC Sde_2609 3307511 - 3307777 + | molybdopterin synthase subunit MoaD Sde_2610 3307779 - 3308216 + | GntR family transcriptional regulator Sde_2611 3308270 - 3308527 + | hypothetical protein Sde_2612 3309377 - 3308568 - | hypothetical protein TERM 3544 3308640 - 3308662 + g 72 -4.9 -4.64657 | gap 1, overlap 3308657 CTGCACACTTGGCTC TTGC-CCGTT AAGT AGCGGTGCAA TTTTTGGACGTTTCA TERM 3545 3311016 - 3310995 - g 91 -6.5 -5.48054 | overlap 3311012 ACCAAAACGAAAAAA GACGCCTCC CGAG AGAAGCGCC AAGCGGCTACAATTG Sde_2613 3309603 - 3311051 + | OmpA family protein TERM 3546 3311063 - 3311082 + T 100 -15 -5.45802 | TTAGAGTGTTTTAAC GGGCGGCT ATTT AGCCGCCC TTTTTGTTTTACAAA Sde_2614 3311784 - 3311155 - | TonB-like periplasmic protein Sde_2615 3313293 - 3311890 - | antirepressor regulating drug resistance signal transduction N-terminal membrane component-like TERM 3547 3312522 - 3312490 - G 70 -9.9 -3.05463 | gap 1 ACTCGCCTTAGGTAA GGCTTGC-GCCACC GACATA GGCAGCAGCAAGCC AACCCACACAATTAA TERM 3548 3313029 - 3313041 + g 72 -4.9 -4.55661 | CGGCTTTACTTTGGT TTAAG CAG CTTAA TATTTTTTTATTCGT Sde_2616 3313847 - 3313446 - | CopY family transcriptional regulator TERM 3549 3313886 - 3313899 + r 70 -5.3 -4.49316 | overlap 3313873 TGGCTGCTTTATAGC GCTTT AATT AAAGC TTTCTTGTTAGTGCT TERM 3550 3313904 - 3313953 + r 80 -10.3 -3.53224 | gap 1, opp_overlap 3313940, overlap 3313905 TTAATTAAAGCTTTC T-TGTTAGTGCTACTTTTTTAGCA CCA TGCTACAAAAGTAGCACCTACATA TTTGGGAGGCAAGTA TERM 3551 3313905 - 3313951 + r 100 -15.4 -3.34398 | opp_overlap 3313940, overlap 3313904 TAATTAAAGCTTTCT TGTTAGTGCTACTTTTTTAGCA CCA TGCTACAAAAGTAGCACCTACA TATTTGGGAGGCAAG TERM 3552 3314055 - 3314037 - R 100 -8.8 -5.47431 | opp_overlap 3314037 GCAAGACACAAAAAA GCCGGC GTAAATA GCCGGC TTTAGGAGGAAACGT TERM 3553 3314037 - 3314055 + r 73 -8.8 -3.53091 | opp_overlap 3314037 GCAAGACACAAAAAA GCCGGC GTAAATA GCCGGC TTTAGGAGGAAACGT Sde_2617 3314813 - 3314136 - | OmpA family protein TERM 3554 3314534 - 3314546 + g 73 -7.7 -4.10188 | CCTGCAATTGGTGAC GAAGC TCT GCTTC TTGTTTGTCCATGTA Sde_2618 3314868 - 3315365 + | hypothetical protein TERM 3555 3315432 - 3315405 - T 86 -11.5 -3.33661 | opp_overlap 3315409, overlap 3315403 TATTGAACCATAAGA CTAACTAATGG GTTACG CCATTAGTTAG CTATCGACTATTTAG TERM 3556 3315445 - 3315462 + T 85 -4.2 -5.51402 | overlap 3315457 TAGCTATCGACTATT TAGCTA TTTTTT TAGCTA TTTTTTTAGCTATCT Sde_2619 3315774 - 3315502 - | TonB-dependent receptor TERM 3557 3315928 - 3315904 - R 93 -13.7 -2.6563 | opp_overlap 3315904, overlap 3315901 3315900 GTTTTGAACAATTTA GTTACCCACAG TAT CTGTGGATAAC TCTGTGAAGATATTC TERM 3558 3315904 - 3315928 + r 81 -11.5 -2.89668 | opp_overlap 3315901 3315900 3315904 GTTTTGAACAATTTA GTTACCCACAG TAT CTGTGGATAAC TCTGTGAAGATATTC TERM 3559 3315929 - 3315951 + r 74 -10 -3.15544 | opp_overlap 3315901 3315900 3315928 3315929 GTATCTGTGGATAAC TCTGTGAAGA TAT TCTTTACAGA TTGATGAAAGTAACG TERM 3560 3316000 - 3316013 + r 70 -2.5 -5.02715 | CATTTTGCTGGGAAT TTAAA CAAA TTTAA TTTTTCCTTTAATAT TERM 3561 3316072 - 3316060 - R 75 -3.4 -5.11112 | opp_overlap 3316060 AAAGTCTAACAAAAA TGCA AATTG TGCA ATTTTTGACGGTATC TERM 3562 3316200 - 3316185 - R 81 -5.4 -5.1963 | gap 1 TTGAAGTAACAAAAA GCGACCA CAC TGG-CGC CAAACACATCAAAAC Sde_2620 3316994 - 3316218 - | beta-lactamase-like Sde_2621 3318220 - 3317033 - | hypothetical protein TERM 3563 3317702 - 3317719 + g 76 -4.1 -4.9725 | AACATGAATTTCGGT GGTATCT GGGT GGATGCC TTTTTCTATAAGAAT TERM 3564 3318254 - 3318276 + r 86 -9.8 -3.97622 | overlap 3318248 TGTCAGTTTTATAGG GGTGCAGGCA CAG TGCTCGCACC TTGTATTTTGCCTAA Sde_2622 3319196 - 3318321 - | dihydrodipicolinate synthase TERM 3565 3318852 - 3318873 + g 73 -10.1 -3.40403 | opp_overlap 3318852 3318855, overlap 3318855 TTGATGGTGAAGGAA CAAGCCCTC TTGG GTGGGCTTG TTGTAATAAGGGGCA TERM 3566 3318873 - 3318852 - G 73 -10.1 -3.34895 | opp_overlap 3318852 3318855, overlap 3318855 TTGATGGTGAAGGAA CAAGCCCTC TTGG GTGGGCTTG TTGTAATAAGGGGCA Sde_2623 3320362 - 3319370 - | putative lauroyl acyltransferase TERM 3567 3319448 - 3319464 + g 71 -7.2 -4.07687 | GCGATAAAAATCTTT CTCGCC GTCTG GGCGGG TTTTAAAACGGCGGT TERM 3568 3320131 - 3320144 + g 81 -3.7 -5.40072 | CCCAAAACAAGGCTT CGCGC TCTT GCTCG TTTTTTTCGGGAAAG Sde_2624 3321483 - 3320440 - | putative oxidoreductase TERM 3569 3321219 - 3321239 + g 81 -3.3 -5.36441 | opp_overlap 3321222, overlap 3321222 GACCTTCGCGCCCAG TAATTTTGG TGG CCAGAAATA TTTTTTCTCTACAAC TERM 3570 3321550 - 3321535 - R 100 -11.8 -5.85244 | opp_overlap 3321535 3321548 AATTAAAACAAAAAA GGCCGG AAGA CCGGCC TTTAAATTACAGCAA TERM 3571 3321535 - 3321550 + r 100 -11.8 -3.75153 | opp_overlap 3321535, overlap 3321548 AATTAAAACAAAAAA GGCCGG AAGA CCGGCC TTTAAATTACAGCAA Sde_2625 3322778 - 3321591 - | trans-2-enoyl-CoA reductase TERM 3572 3321616 - 3321626 + g 73 -4.6 -4.79826 | TCGAGTGCAACATCT GGCG CAA CGTC TTTTTCGTAGTCTAT TERM 3573 3321752 - 3321776 + g 73 -4.1 -4.7497 | overlap 3321754 AAATGGCTTCCACTT TAGCTTGCAGC TCT GCCGCTAGCTC TTTTTCATCCATACG TERM 3574 3322313 - 3322333 + g 72 -5.3 -4.72846 | opp_overlap 3322313 3322318 CAATTGGCTTTAATA CCGAAGAGT ACA ACTCGCCGG TTTTTGGATCTGTGC TERM 3575 3322531 - 3322519 - G 72 -4.7 -4.61633 | opp_overlap 3322519 ACAGAGTTGTAAAAA CCTGC AGA GCCGG TTTTGCGTTCGGTGC TERM 3576 3322716 - 3322737 + g 77 -11.5 -3.15544 | opp_overlap 3322714 CTCACGAACATTAGC CGCACACCC TTCT GGGTGGGCG TTGGTACAAATAAAA TERM 3577 3323022 - 3323012 - g 70 -2.4 -4.96848 | CGCTGCAGAGAAAAA GGCC TCG GGCA TGGCTGTTTCTATGC TERM 3578 3323332 - 3323320 - g 80 -6.3 -4.86621 | opp_overlap 3323320 AGGGTGAACTAAAAA GCTTT TAC AAAGC TATTACCGAATCGGA Sde_2626 3322914 - 3323486 + | tRNA-(ms(2)io(6)A)-hydroxylase TERM 3579 3323712 - 3323696 - g 70 -5.1 -4.55295 | opp_overlap 3323708 3323710 CCGCCTACAAAGAAA CACCACA ATG TGTAGCG CGCCTGCTTACGCAC TERM 3580 3324433 - 3324414 - g 79 -2.2 -5.55769 | overlap 3324417 GGGCACAATAAAAAA CATTAATA ACAG TATTATTG AAATAGACGCGCGCA Sde_2627 3323542 - 3324870 + | hypothetical protein TERM 3581 3325262 - 3325273 + G 72 -5.8 -4.43501 | opp_overlap 3325257, overlap 3325263 CCCCAAAAACGCCAA TGCC CTAG GGCA TTTTCTAGGTGGCTT TERM 3582 3325263 - 3325293 + G 100 -9 -5.46706 | opp_overlap 3325257, overlap 3325262 CCCAAAAACGCCAAT GCCCTAGGGCATTT TCT AGGTGGCTTAGGGC TTTTTGTTTTGGGGT Sde_2628 3324873 - 3325634 + | adenylosuccinate synthetase Sde_2629 3325631 - 3326473 + | hypothetical protein Sde_2630 3326980 - 3326519 - | response regulator receiver domain-containing protein Sde_2631 3329379 - 3327031 - | hypothetical protein TERM 3583 3327084 - 3327070 - G 74 -8.5 -4.00476 | opp_overlap 3327066 3327070 CAAAGCTACTACAAA GCGGG AACCA CCCGC TGGGTTGTCATCGAC TERM 3584 3327435 - 3327454 + g 71 -3.4 -4.89339 | overlap 3327436 3327450 ATACATGCGGTAAGG GGCCGATG CTAA CCTCGGCG TTTTTCTCCGTAATT TERM 3585 3329344 - 3329320 - G 86 -12.9 -3.40867 | GTAGGCACTAAGCAA CGCAACAGTGA ATA CCACTGCTGCG AGCGTGTGAAGAGTC Sde_2632 3331296 - 3329473 - | HflK TERM 3586 3329514 - 3329526 + g 77 -3.3 -5.1287 | TATAGTACGCGTTCA GCAAG TAC CATGC TTTTTTACGTATACC TERM 3587 3331391 - 3331404 + r 70 -3.9 -4.77165 | opp_overlap 3331391, overlap 3331386 GAACCCTACACAAGA TGAAA GCGC TTTCA TTTTGTTGTGAAAAG Sde_2633 3332599 - 3331475 - | endo-1,4-beta-xylanase TERM 3588 3331834 - 3331848 + g 76 -4.2 -5.03715 | opp_overlap 3331831 TTAGACCTAAATCGG CCATGG CCA CGATGG TTTTTTCCAACTCGT Sde_2634 3332885 - 3334297 + | host factor Hfq TERM 3589 3334350 - 3334326 - T 100 -15.9 -5.28176 | opp_overlap 3334326 TTCACCCATAAAAAA GCCGAAACTTA TTA TAAGTTTCGGC TTTTTTGTTTGGGCT TERM 3590 3334326 - 3334350 + T 100 -15.9 -5.64421 | opp_overlap 3334326 TTCACCCATAAAAAA GCCGAAACTTA TTA TAAGTTTCGGC TTTTTTGTTTGGGCT Sde_2635 3334885 - 3334406 - | tRNA isopentenyltransferase TERM 3591 3335064 - 3335031 - R 100 -11.9 -5.29846 | gap 1 AAGGGGAAATAAAAA GCAGCCCCACAACTAA TAG TTAGCT-TGGAGCTGC CGAATGCCAACCTAA Sde_2636 3336967 - 3335102 - | DNA mismatch repair protein TERM 3592 3337257 - 3337245 - H 86 -10.5 -3.89412 | AGGGAAACGATTAAA CGCGC GAT GCGCG GGAAGCATTCGACCG TERM 3593 3337710 - 3337698 - g 78 -4.8 -5.0133 | CACCCTTGCAAAAAA GCAC TCTCT GTGC GCTTCCGCCAAGCAA Sde_2637 3337591 - 3337869 + | cell wall hydrolase/autolysin Sde_2638 3337872 - 3338207 + | hypothetical protein Sde_2639 3339171 - 3338281 - | fructokinase TERM 3594 3339050 - 3339038 - G 81 -3.3 -5.41143 | TATGGCGCAAAAAAA GCGAG TGC CTTGC CTAGCGTTTCTTGGG Sde_2640 3341243 - 3339216 - | 4Fe-4S cluster binding TERM 3595 3340056 - 3340066 + g 71 -6.8 -4.11216 | AAAAGATTGTGTAAG CACC GTG GGTG TTTTGGGCGTAACGC Sde_2641 3341996 - 3341379 - | hypothetical protein Sde_2642 3342029 - 3342358 + | AraC family transcriptional regulator TERM 3596 3342382 - 3342347 - f 78 -9.7 -3.49898 | overlap 3342348 AAAAAACACCTACAA CGCCGCGCTTAGCTA ATCCAA TGGCTAAGCGCGCCA AACAATAAAACCTGC TERM 3597 3342381 - 3342348 - f 76 -11 -2.68312 | overlap 3342347 AAAAACACCTACAAC GCCGCGCTTAGCTA ATCCAA TGGCTAAGCGCGCC AAACAATAAAACCTG Sde_2643 3342625 - 3343245 + | GntR family transcriptional regulator TERM 3598 3343329 - 3343304 - T 100 -12.7 -5.95539 | opp_overlap 3343304 TTCCAAACAAAAAAA TACCTGTAGAG CTGC CCCTACAGGTA TTTAGCGTTTTACTA TERM 3599 3343304 - 3343329 + T 86 -10.5 -3.77484 | opp_overlap 3343304 TTCCAAACAAAAAAA TACCTGTAGAG CTGC CCCTACAGGTA TTTAGCGTTTTACTA TERM 3600 3343334 - 3343350 + T 80 -3.7 -5.33405 | overlap 3343343 CCCTACAGGTATTTA GCGTTTT ACT AAAAAGC TTTTTATTTGCTGCC Sde_2644 3345735 - 3343354 - | GTPase EngC Sde_2645 3347384 - 3345939 - | betaine-aldehyde dehydrogenase TERM 3601 3346436 - 3346448 + g 71 -3.3 -4.84642 | overlap 3346437 CGGTATCGGCAGCCA TTGGG TCG CCCAC TTTTATTGCTTTCAC TERM 3602 3347365 - 3347377 + g 70 -4.9 -4.48263 | overlap 3347372 CCGTTGATAAAATTT TTCAT GTT ATGAA TTTTCATATTATCTC Sde_2646 3348162 - 3347386 - | phosphatidylserine decarboxylase Sde_2647 3349180 - 3348164 - | dehydrogenase TERM 3603 3348904 - 3348882 - G 75 -9.8 -3.49777 | opp_overlap 3348898 TGGCACACATGAGAA TGCCCTGCAT TAC ACGCTGGGCA ATCGCCACAGTAATC Sde_2648 3350344 - 3349193 - | uroporphyrinogen decarboxylase HemE TERM 3604 3349505 - 3349491 - G 76 -4.2 -5.00616 | overlap 3349492 TCGGGCTGCAAAAAA CCAAGC TTG GCTTGT TGCACGGCATAGGTA TERM 3605 3349742 - 3349757 + g 71 -10.4 -2.6138 | overlap 3349741 3349739 AATTAACTCTCGCAC TGCGCG TACA CGCGCA ATATCTTCTTTAATA TERM 3606 3350540 - 3350517 - R 100 -8.8 -6.23317 | ACAAAAAGAAAAAAA GCGCTCCAGC TCAC ACCAGAGCGC CAAAGAGACTGGGCA Sde_2649 3352212 - 3350602 - | glutamate synthase, NADH/NADPH, small subunit 2 TERM 3607 3352057 - 3352039 - G 77 -8.8 -3.95036 | AATTAGCGCAAACAA CACACCGA AAC CCGGTGCG CTAACCACTGAACCC TERM 3608 3353682 - 3353668 - g 76 -4.3 -5.0133 | opp_overlap 3353668 TAGCGGGCGAAAAAA TGGAT TTCAT ATCCA TACATTTATACGACT Sde_2650 3352440 - 3354803 + | agarase TERM 3609 3354855 - 3354824 - f 75 -8.6 -3.79747 | opp_overlap 3354827 3354828, overlap 3354827 TTACCTATTAGCAAA TCACCTAGCGCCCG TTTT CGGGCGCTAGCTTT TTATGGACTATAAAA TERM 3610 3354827 - 3354852 + F 100 -14.7 -4.8667 | opp_overlap 3354827 3354824, overlap 3354828 CCTATTAGCAAATCA CCTAGCGCCCG TTTT CGGGCGCTAGC TTTTTATGGACTATA TERM 3611 3354852 - 3354827 - f 100 -14.7 -2.98493 | opp_overlap 3354827 3354828, overlap 3354824 CCTATTAGCAAATCA CCTAGCGCCCG TTTT CGGGCGCTAGC TTTTTATGGACTATA TERM 3612 3354828 - 3354851 + F 100 -18.2 -3.51279 | opp_overlap 3354827 3354824, overlap 3354827 CTATTAGCAAATCAC CTAGCGCCCG TTTT CGGGCGCTAG CTTTTTATGGACTAT TERM 3613 3354968 - 3354951 - g 74 -3.4 -5.0538 | TTGTACCGCAAAAAA GCAACC TTTAAC GGTTAC CCCCCCTGCTAACGC TERM 3614 3356959 - 3356989 + G 78 -11.8 -3.02144 | TACTACCGCACCGTA GGCTCTGCCGGGGA GAT TCACTCGCAGAGCC TGTTAAACACCGTGC Sde_2651 3354871 - 3357129 + | ATPase TERM 3615 3357151 - 3357175 + F 100 -10 -4.72029 | CGTTTCGGGGTCACA TGGCGCTGCT CGCGA GGTAGCGCCA TTTTATTCAATTAAA TERM 3616 3358090 - 3358106 + G 82 -10.9 -3.63073 | opp_overlap 3358093 GCATACATTTTTAGA TGACACC TTA GGTGTCA TTGTTACCGCCTATG TERM 3617 3359021 - 3359005 - g 75 -2.9 -5.09762 | AGTTGAAGATAAAAA CCAATCG TTC CAAGTGG ATTTCGATTGGGATG Sde_2652 3357476 - 3361108 + | 3-dehydroquinate synthase TERM 3618 3361156 - 3361119 - f 70 -7.8 -3.62255 | gap 1, opp_overlap 3361150, overlap 3361115 3361120 TCTAACAATAACTAA TGC-TTGGTGCCAACTC CCAAT GAGTTGGCACCCACGTA AAAAGTGGTTTTAAC TERM 3619 3361153 - 3361120 - f 75 -10.4 -2.7663 | gap 1, opp_overlap 3361150, overlap 3361119 3361115 CTAACAATAACTAAT GCTTGGTGCCAACTC CCAAT GAGTTGGCACCCA-C GTAAAAAGTGGTTTT Sde_2653 3361173 - 3363203 + | hypothetical protein TERM 3620 3363258 - 3363278 + F 70 -9.7 -2.55446 | overlap 3363257 ATTTCTGTAGCACTC TGGGCGC AACCTCC GCGCCCA ATTCCTCGATTTATC TERM 3621 3363292 - 3363319 + F 95 -4.8 -5.85178 | CAATTCCTCGATTTA TCCATCCCTTCA GCAA TGATCGGGTGGA TTTTTTTTGCCTATT TERM 3622 3363504 - 3363480 - g 93 -15.1 -2.82015 | opp_overlap 3363473, overlap 3363492 GTTACACCCAGCACA GCCGCTTTACA AGC TGCAAAGCGGC CCAACTTAGCAGCGC TERM 3623 3364829 - 3364854 + G 73 -10.5 -3.01712 | overlap 3364831 AAGACACAGGCCCGC CATCGTAATCG CCGA CGATCACGATG TGTTACAAGGCAACC Sde_2654 3363402 - 3365768 + | hypothetical protein TERM 3624 3365821 - 3365854 + T 93 -13.3 -2.77834 | opp_overlap 3365815 3365824 3365829, overlap 3365829 TTTATATTATCTCTA AAAGAAAACCGGGCT TAAT AGCCCGGTTTTTTTA TGCTATGTGTTGTGT TERM 3625 3365851 - 3365824 - T 100 -12.8 -4.12456 | opp_overlap 3365821 3365829, overlap 3365815 3365829 ATATTATCTCTAAAA GAAAACCGGGCT TAAT AGCCCGGTTTTT TTATGCTATGTGTTG TERM 3626 3365846 - 3365829 - T 100 -12.7 -5.08255 | opp_overlap 3365829 3365821, overlap 3365824 ATCTCTAAAAGAAAA CCGGGCT TAAT AGCCCGG TTTTTTTATGCTATG TERM 3627 3365829 - 3365846 + T 100 -12.7 -5.69473 | opp_overlap 3365824 3365829, overlap 3365821 ATCTCTAAAAGAAAA CCGGGCT TAAT AGCCCGG TTTTTTTATGCTATG Sde_2655 3369919 - 3365912 - | agarase TERM 3628 3367639 - 3367651 + g 72 -4.9 -4.58395 | overlap 3367623 GCGGGTTAGTACCGG CAATT AAT AATTG TTTTTCGGCACTAAA TERM 3629 3369745 - 3369722 - G 72 -10.4 -2.87132 | overlap 3369727 TGCTCGGTTTACATA GTTAATAGCG GTTG CGCCATTAAC ACTATAAACGCTAAC TERM 3630 3371202 - 3371190 - g 76 -9.1 -3.78778 | opp_overlap 3371187, overlap 3371183 TTACTAGAGCAACAA CCAGC GCT GCTGG CCGATTTAGCACCAA Sde_2656 3370836 - 3371774 + | 2-keto-3-deoxygluconate kinase TERM 3631 3372706 - 3372687 - g 88 -5.6 -5.60993 | overlap 3372689 3372690 CGGGCCAGAAAAAAA CACCTGCC AGTG GGCAGAAG ACGGCATTAACTTTG TERM 3632 3372704 - 3372689 - g 77 -6.8 -4.45201 | overlap 3372687 3372690 GGCCAGAAAAAAACA CCTGCC AGTG GGCAGA AGACGGCATTAACTT Sde_2657 3371827 - 3372933 + | hypothetical protein TERM 3633 3373053 - 3373017 - f 81 -10.9 -3.35813 | overlap 3373034 TGTGATTGTAATCAA GCTAGCACCGCGAAAGA GCC TCTTTCGCGGCATCAAC TAGGTGACACAGTAA Sde_2658 3373278 - 3374144 + | Type IV pilus assembly protein PilM TERM 3634 3374287 - 3374299 + F 88 -3.4 -5.80003 | opp_overlap 3374287 CAGAGTATTAACAAA GCAA GTATA TTGC TTTTTTCTTTGTTCA TERM 3635 3374373 - 3374406 + G 75 -9.8 -3.63515 | gap 2 TTCGTTTTTCTAACG CTTTGCCA-T-AGCGC CCTA GCGCTAAATGGCAAAG TTATTACACCTGCCG Sde_2659 3374334 - 3375197 + | penicillin-binding protein 1A Sde_2660 3376476 - 3375187 - | ribosomal protein L31 TERM 3636 3375410 - 3375430 + g 70 -4.7 -4.42653 | overlap 3375405 TTTTTACCTAGTAGC GTGGTTACA TTT TTTGACCAC TTTTCTAGATCGGCT TERM 3637 3375779 - 3375752 - G 71 -3.4 -4.86731 | gap 1, opp_overlap 3375752, overlap 3375756 TGCGGCCAAACAAAA GTCAGCATGGTTA GAA TATCCATGC-GCC TAAATTCACTCTCTT TERM 3638 3376645 - 3376630 - R 100 -11.8 -5.80817 | opp_overlap 3376630 TCCAATACAAAAAAA CCCGGC TATT GCCGGG TTCTAATTCAAACAT TERM 3639 3376630 - 3376645 + r 91 -11.8 -3.51032 | opp_overlap 3376630 TCCAATACAAAAAAA CCCGGC TATT GCCGGG TTCTAATTCAAACAT Sde_2661 3377981 - 3376686 - | adenylosuccinate synthetase TERM 3640 3378077 - 3378046 - R 100 -11 -5.10497 | overlap 3378047 3378050 AAGTGATTGAAAAAA TTAACGCCGATTAA TTAC TTAATCGGCGCTAC TACGAATTCTTCGCC TERM 3641 3378076 - 3378047 - R 100 -14.5 -3.65214 | overlap 3378046 3378050 AGTGATTGAAAAAAT TAACGCCGATTAA TTAC TTAATCGGCGCTA CTACGAATTCTTCGC TERM 3642 3378073 - 3378050 - R 100 -14 -3.94773 | overlap 3378047 3378046 GATTGAAAAAATTAA CGCCGATTAA TTAC TTAATCGGCG CTACTACGAATTCTT Sde_2662 3379244 - 3378060 - | ATP phosphoribosyltransferase regulatory subunit, putative Sde_2663 3379443 - 3379258 - | hypothetical protein TERM 3643 3379396 - 3379384 - G 71 -3.3 -4.83169 | opp_overlap 3379384, overlap 3379385 ATTTGGGTACAAAAA TGGCA GAA TGCCC TCGATTACCAAGATT TERM 3644 3379548 - 3379531 - R 100 -8.4 -5.60993 | opp_overlap 3379531 GGCGGCATAAAAAAA CCGGCT TGTGTT AGCCGG TTTCCTTATTTTACC TERM 3645 3379531 - 3379548 + r 79 -8.4 -4.20834 | opp_overlap 3379531 GGCGGCATAAAAAAA CCGGCT TGTGTT AGCCGG TTTCCTTATTTTACC TERM 3646 3379607 - 3379596 - R 71 -2.2 -5.10077 | overlap 3379586 AAACAGCTTAAAAAA TAGC CTTA GCCA ACTTTTTACGCTTTA Sde_2664 3380495 - 3379620 - | protease subunit HflC Sde_2665 3381658 - 3380498 - | heat shock protein HslU TERM 3647 3381536 - 3381546 + g 76 -4 -5.08255 | ACCTTTACCGCCGAA TAAG CCG CTTA TTTTGTTTTGAAAGT Sde_2666 3383033 - 3381708 - | putative GTP-binding protein Sde_2667 3383306 - 3383046 - | RNA-binding protein Hfq Sde_2668 3384455 - 3383445 - | tRNA isopentenyltransferase TERM 3648 3383595 - 3383606 + g 71 -3.6 -4.89393 | TGCCAATTGGCGGGT GGCG GCTA TGCC TTTTTCTCGCATTTC mutL 3386352 - 3384460 - | DNA mismatch repair protein TERM 3649 3386313 - 3386335 + g 74 -3.4 -4.98531 | overlap 3386315 CACCAGCGGCAATTT GGTTAGCC AATCGCG GGCTAAGC TTTTTAATTTCAGGC Sde_2670 3387697 - 3386354 - | N-acetylmuramoyl-L-alanine amidase TERM 3650 3386601 - 3386583 - G 72 -5.4 -4.43351 | opp_overlap 3386583 3386584, overlap 3386580 3386584 3386592 ACATCGTAAAAATAA CTTTTAAC ACC GTTAAAAA TTGCTGTGGCCAATT TERM 3651 3386656 - 3386676 + g 74 -8.3 -3.86346 | overlap 3386644 ACGCTCGCGCTTCGT CGGGGTTTG ATA TAAACCCTG TTTCTACCAGAATAG Sde_2671 3388246 - 3387773 - | RNA binding S1 TERM 3652 3388206 - 3388218 + g 76 -4.9 -4.87389 | ACGGTTGCCTCTTCG TTTAC CAG GTAAA TTTCTTTTTCGACTA Sde_2672 3389748 - 3388246 - | ribosomal protein S15 TERM 3653 3388614 - 3388636 + g 77 -10.6 -3.37236 | overlap 3388601 GGCGCGCCGCCTCTC CTGGGTGC GGCGTTA GCACCCAG TTATCGCGTTGCGTT TERM 3654 3390865 - 3390843 - g 70 -2.1 -5.01732 | opp_overlap 3390849 3390856 AACCTTTCTAAAAAA TACTGAA-GGC TCG GCCATTC-GTA GAATTGGCTTTGAAA Sde_2673 3389953 - 3391062 + | tRNA pseudouridine synthase B TERM 3655 3392384 - 3392360 - g 75 -2.7 -5.19819 | overlap 3392361 3392364 AAACAAAATTAAAAA CGTATTGGTGC TTG GCCCCAACGCA GACAAAGTGCACGGT TERM 3656 3392621 - 3392634 + G 72 -8.1 -3.82262 | opp_overlap 3392620 GCGCACCCAAGCTAT TGGCG ACTC CGCCA TTGTTGATTCGGCTT Sde_2674 3391161 - 3393761 + | ribosome-binding factor A TERM 3657 3393800 - 3393839 + T 100 -15.2 -3.96483 | opp_overlap 3393805 3393806, overlap 3393806 AAAAACTGAAAGAAT TAAAAGGCCCGCATTAAC ATCC GTGAATGCGGGCTTTTTG TTATTTAAATAACCT TERM 3658 3393834 - 3393805 - T 100 -10.7 -4.62203 | opp_overlap 3393800 3393806, overlap 3393806 CTGAAAGAATTAAAA GGCCCGCATTAAC ATCC GTGAATGCGGGCT TTTTGTTATTTAAAT TERM 3659 3393806 - 3393833 + T 100 -14.2 -5.38549 | opp_overlap 3393805 3393806, overlap 3393800 TGAAAGAATTAAAAG GCCCGCATTAAC ATCC GTGAATGCGGGC TTTTTGTTATTTAAA TERM 3660 3393833 - 3393806 - T 100 -14.2 -3.36237 | opp_overlap 3393806 3393800, overlap 3393805 TGAAAGAATTAAAAG GCCCGCATTAAC ATCC GTGAATGCGGGC TTTTTGTTATTTAAA Sde_2675 3395089 - 3393854 - | initiation factor 2 TERM 3661 3395019 - 3395003 - G 72 -5.1 -4.55661 | ACTAATAAAAAAAGA TTGGCCA AAA TTGCCAA AGAAAACGGCGAGAA TERM 3662 3395065 - 3395044 - G 75 -3 -5.1417 | gap 1, overlap 3395045 3395047 CGAGAAAACCAAAAA CGAGCAAGG GCCAG CCCTGCT-G TAAGAACTGCCAATA TERM 3663 3395200 - 3395172 - R 100 -16.1 -3.95647 | overlap 3395165 CAAAACAATTAACAA CGTTGCGATCAAG CCG CTAGATCGCAACG TACGAGGAAAGGAAA Sde_2676 3395765 - 3395220 - | oligoribonuclease Sde_2677 3395938 - 3396969 + | putative GTPase TERM 3664 3397797 - 3397779 - g 75 -11 -3.02511 | opp_overlap 3397776 CGGATTGGGGCAACA CCGATGGG TTG CCCATCGA GGGAATTTAAACGTT Sde_2678 3396977 - 3397807 + | fused rhodanese domain-containing protein/phosphatidylserine decarboxylase Sde_2679 3398000 - 3398860 + | phosphatidylserine decarboxylase TERM 3665 3398863 - 3398898 + T 78 -10.4 -3.23899 | gap 1, opp_overlap 3398854 3398871 AACACAGGCCTAGTT TGCAACAACGCCCAGCC AAA GGTTGGGCGCTGC-GCA TTAAATTAATTAAAG TERM 3666 3398891 - 3398871 - T 100 -12.5 -3.62597 | opp_overlap 3398863, overlap 3398854 CCTAGTTTGCAACAA CGCCCAGCC AAA GGTTGGGCG CTGCGCATTAAATTA Sde_2680 3400370 - 3398904 - | HD-GYP domain-containing protein TERM 3667 3399165 - 3399129 - G 72 -8.8 -3.50532 | AGCCAAATCAACCAA TACCATTTCGTACAAG GGCTG CTTGTACGCATCGGTA ACAACCATTACTTTT TERM 3668 3400103 - 3400113 + g 76 -8.2 -4.11692 | GGGTGTTTTTAAGCG GGGC TGT GCCC TTTTGGACATCGATA hemE 3401577 - 3400513 - | uroporphyrinogen decarboxylase gltD 3403084 - 3401633 - | glutamate synthase subunit beta gltB 3407546 - 3403101 - | glutamate synthase subunit alpha TERM 3669 3407805 - 3407788 - R 100 -8.4 -5.36441 | GCCTTAGACAAAAAA GCCCCT AATTTA AGGGGC TGCATACAAATGGGC Sde_2684 3409393 - 3407909 - | triosephosphate isomerase Sde_2685 3410516 - 3409428 - | 3-dehydroquinate synthase TERM 3670 3410375 - 3410362 - G 76 -2.4 -5.4111 | opp_overlap 3410371 AACAACGAGAAAAAA CTGT CGCCAT ACAG CGCATCGATCGTTGT Sde_2686 3411187 - 3410678 - | shikimate kinase Sde_2687 3413373 - 3411190 - | peptidase M41, FtsH Sde_2688 3413871 - 3413377 - | type 4 fimbrial biogenesis protein PilP Sde_2689 3414538 - 3413924 - | hypothetical protein TERM 3671 3414130 - 3414147 + g 75 -6.3 -4.39386 | AAAACTCTGTATTTC TAGACTC TAGG GGGTCTA TTTTAATCATTTCCA Sde_2690 3415103 - 3414540 - | periplasmic sensor signal transduction histidine kinase Sde_2691 3416172 - 3415105 - | response regulator receiver domain-containing protein TERM 3672 3415998 - 3416008 + g 78 -5.4 -4.82901 | GCGCGACAGCCTCCA CATC ATT GATG TTTTTCTCGACCACG TERM 3673 3416122 - 3416140 + g 77 -3.8 -5.1356 | overlap 3416125 3416126 CGTTGAACTCACGTC CAATCCCA GCA TGGGGTTC TTTTTCTTAGTGAAC TERM 3674 3416125 - 3416137 + g 74 -5.5 -4.66002 | overlap 3416122 3416126 TGAACTCACGTCCAA TCCCA GCA TGGGG TTCTTTTTCTTAGTG TERM 3675 3416160 - 3416171 + g 76 -4.4 -5.06505 | TCTTAGTGAACAAGT TGAG AATA CTCA TTTTTCTATCTAATT TERM 3676 3416700 - 3416683 - g 74 -3.3 -5.03715 | ACCACGGGTAAAAAA GGCTCTG GGGG CAGCACC TTAACCATGCAGGTT TERM 3677 3418387 - 3418375 - g 72 -9.1 -3.62275 | AGCGATTACCCCAAA GCACC AAA GGTGC TCGACGACCAAGTCG Sde_2692 3416329 - 3418869 + | penicillin-binding protein TERM 3678 3418959 - 3418943 - T 100 -10.8 -5.4251 | opp_overlap 3418943 CGCAGACACAAAAAA GCCGGC GAATA GCCGGC TTTTTAATAACTAAC TERM 3679 3418943 - 3418959 + T 100 -10.8 -4.7497 | opp_overlap 3418943 CGCAGACACAAAAAA GCCGGC GAATA GCCGGC TTTTTAATAACTAAC rpmE 3419199 - 3418987 - | 50S ribosomal protein L31 TERM 3680 3419025 - 3419012 - G 72 -6.7 -4.33274 | TTGATAGCACCAAAA CGCTT GTTG AAGCG ATCGATACGGCCGCC TERM 3681 3419917 - 3419906 - g 75 -3 -5.20783 | opp_overlap 3419906 ACTTAAAGACAAAAA TCTT ATCG AAGA AATTTTAGTTAAAGA TERM 3682 3421583 - 3421546 - g 72 -8.3 -3.80733 | overlap 3421547 CGGAGGCGAGAAGAA CGCGCTGGTCGGTGGAT ATTG ATCCGGTGACCAGCGCT TAAAGATCAATCTAT TERM 3683 3421582 - 3421547 - g 77 -11.8 -2.88118 | overlap 3421546 GGAGGCGAGAAGAAC GCGCTGGTCGGTGGAT ATTG ATCCGGTGACCAGCGC TTAAAGATCAATCTA Sde_2694 3419376 - 3421586 + | transcription elongation factor GreA / replication restart DNA helicase PriA Sde_2695 3422690 - 3421590 - | carbamoyl-phosphate synthase, large subunit, glutamine-dependent TERM 3684 3422912 - 3422927 + H 86 -2.5 -5.75599 | overlap 3422910 TAGACGTTCTCAAGC TGTGC ACCAGC GCGCA TTTTTTTCTAATTTG TERM 3685 3423220 - 3423203 - g 95 -2.6 -5.85244 | overlap 3423205 AAGTAAAAGAAAAAA CAGCCG CTAACT CGGCCA AGAACGAGGAGCAAA TERM 3686 3423218 - 3423205 - g 70 -5.2 -4.53077 | overlap 3423203 GTAAAAGAAAAAACA GCCG CTAACT CGGC CAAGAACGAGGAGCA Sde_2696 3423025 - 3423585 + | carbamoyl-phosphate synthase, small subunit TERM 3687 3424031 - 3424008 - g 70 -10.4 -2.57132 | overlap 3424007 TGCGCCGCTTAGAAG CTTTGCTTGC CGTA GCAAACAAAG ATGCCTCACTGATAG Sde_2697 3423713 - 3424252 + | ATP-dependent protease peptidase subunit TERM 3688 3424278 - 3424262 - f 70 -9.5 -2.75481 | TTCTAATTTCAATCA TTCGCAA ACA TTGCGAA CACGACTTGATACTG TERM 3689 3425527 - 3425509 - g 70 -2.3 -5.00851 | ATCAAGTAAACAAAA GCACCGA AAATA TTGGCGC CCGACGCTTGCACAC hslU 3424365 - 3425681 + | ATP-dependent protease ATP-binding subunit Sde_2699 3425694 - 3426098 + | heat shock protein DnaJ TERM 3690 3426109 - 3426126 + F 100 -12.7 -4.28994 | ACTAGTAAACCTTCA GGGCCGA GCAA TCGGCCC TTTTCCTCAATACTC Sde_2700 3426234 - 3426983 + | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase Sde_2701 3427017 - 3427676 + | hypothetical protein Sde_2702 3427695 - 3429299 + | 2-octaprenylphenol hydroxylase TERM 3691 3429303 - 3429335 + T 73 -8.5 -3.58177 | gap 1, opp_overlap 3429300 3429294 ACCAAACGATAATGT GTGCGATTGGACGG AGTACG CCGTCCAACC-CAC TTAATTTCGCTTATA Sde_2703 3430133 - 3429336 - | putative outer membrane protein Sde_2704 3432392 - 3430224 - | polynucleotide phosphorylase/polyadenylase TERM 3692 3431064 - 3431099 + g 72 -6.2 -4.24149 | ACCGTTAGATTCAGT GATTTCACTTACTACA CGCA TGGTGTAAGGGAAATC TTCTTCTTTTGGTAA TERM 3693 3432377 - 3432394 + g 82 -7 -4.91084 | TATCCTTTTGACTTG GAGTGC CCCATT GCACTC TTTTTACCTTTTATT TERM 3694 3432562 - 3432583 + r 72 -7.2 -3.97368 | opp_overlap 3432563, overlap 3432563 GAGCAAAAGACGAAA ATGCCCGC AACTAG GCGGGCAC TTTGTAGCTTAGCGG TERM 3695 3432582 - 3432563 - R 100 -10.7 -4.56729 | opp_overlap 3432562 3432563 AGCAAAAGACGAAAA TGCCCGC AACTAG GCGGGCA CTTTGTAGCTTAGCG TERM 3696 3432563 - 3432582 + r 79 -10.7 -2.981 | opp_overlap 3432563, overlap 3432562 AGCAAAAGACGAAAA TGCCCGC AACTAG GCGGGCA CTTTGTAGCTTAGCG Sde_2705 3432861 - 3432592 - | SSU ribosomal protein S15P TERM 3697 3432972 - 3433006 + r 72 -7.2 -3.94188 | overlap 3432973 AGCTGAACTCTCCTA CCTTTTGCCTTAGCTC TAC GAGCTAAAGCAAAAAA TTCTTTAAAATCAAT TERM 3698 3432973 - 3433005 + r 79 -10.7 -2.96031 | overlap 3432972 GCTGAACTCTCCTAC CTTTTGCCTTAGCTC TAC GAGCTAAAGCAAAAA ATTCTTTAAAATCAA Sde_2706 3433969 - 3433028 - | tRNA pseudouridine synthase B Sde_2707 3434359 - 3433973 - | ribosome-binding factor A TERM 3699 3434286 - 3434262 - G 76 -9.2 -3.78022 | opp_overlap 3434262 TTGATATTCACCAAA CCGAGGCGCG GGTCG CGCACTTCGG TTTGAATGACGCGCG TERM 3700 3434262 - 3434286 + g 72 -9.2 -3.64703 | opp_overlap 3434262 TTGATATTCACCAAA CCGAGGCGCG GGTCG CGCACTTCGG TTTGAATGACGCGCG TERM 3701 3434380 - 3434408 + r 74 -10.3 -2.62613 | opp_overlap 3434382, overlap 3434378 CCAACCTCTTACAGA GATGCTCGCGA TTAAAGC TCGCGAGCAAC CTCTTTAACATCGAA TERM 3702 3434406 - 3434382 - R 83 -11.5 -2.99319 | opp_overlap 3434380 3434378 AACCTCTTACAGAGA TGCTCGCGA TTAAAGC TCGCGAGCA ACCTCTTTAACATCG Sde_2708 3437117 - 3434391 - | translation initiation factor 2 TERM 3703 3436477 - 3436490 + g 83 -4.5 -5.27335 | gap 1 GGGCCAGGAGCTGGC GCAGGC TTA GCC-GC TTTTTCTTTGCGAGC nusA 3438669 - 3437188 - | transcription elongation factor NusA TERM 3704 3437378 - 3437389 + g 76 -4.4 -5.0916 | opp_overlap 3437378 ATGTTAACCAAATCA TCAG CAGG CTGA TTTTTCTCTTCGCCA TERM 3705 3437943 - 3437957 + g 76 -5 -4.8048 | CTATACGGCCGTCGT TTGTAG CTA CTGCAA TTTTTGCTCTAGAGC Sde_2710 3439218 - 3438763 - | hypothetical protein TERM 3706 3439260 - 3439246 - H 100 -7.1 -5.72622 | opp_overlap 3439246 TCTACAAACAAAAAA TGGGC ATAAA GCCCA TTTAAACAATAATTC TERM 3707 3439336 - 3439324 - H 89 -6.2 -5.24989 | overlap 3439334 CCAGATACGAAAAAA CCCC ATAAA GGGG CCCCGCGCGACGCTA Sde_2711 3439836 - 3440840 + | hypothetical protein Sde_2712 3440846 - 3441472 + | MobA-like protein-like Sde_2713 3442443 - 3441469 - | hypothetical protein TERM 3708 3442087 - 3442105 + g 84 -7.4 -4.87291 | opp_overlap 3442087 3442089 CACTTTTGCACTATA CAGCCC ACAGCTA GGGCTG TTTTTCATTAAAATA TERM 3709 3442395 - 3442406 + g 83 -4.4 -5.27476 | ACAAACAAGAGCTTA TACC TACA GGTA TTTTATTTTCTTCCA Sde_2714 3442993 - 3442571 - | hypothetical protein TERM 3710 3442960 - 3442971 + g 81 -3.6 -5.42862 | overlap 3442955 CGTTTAACCCTTGCG CGCG CGAT TGCG TTTTTTTGCCGGTAT Sde_2715 3443478 - 3442999 - | phage-associated protein-like TERM 3711 3443585 - 3443596 + r 73 -5.8 -4.41348 | AACACTTGCTATATG GTGC CAAA GCAC TTTATTTAAAGCCCA TERM 3712 3443661 - 3443682 + r 100 -8.7 -5.03715 | opp_overlap 3443661 TTAGACATAAAAAAA GCACCCCTA TTAC TAGGGATGC TTTTTTAAAGATGGT TERM 3713 3443682 - 3443661 - R 100 -10.9 -5.76633 | opp_overlap 3443661 TTAGACATAAAAAAA GCACCCCTA TTAC TAGGGATGC TTTTTTAAAGATGGT Sde_2716 3444175 - 3443786 - | protein translocase subunit secG Sde_2717 3444935 - 3444195 - | triosephosphate isomerase Sde_2718 3446473 - 3445133 - | phosphoglucosamine mutase TERM 3714 3445341 - 3445368 + g 72 -2.6 -5.08824 | opp_overlap 3445324, overlap 3445342 3445343 TCTACCTTATTGGTG ACCCGCACGTTA ATCA TAACTTGCGGCA TTTTTTGCATGCGCA TERM 3715 3445697 - 3445711 + g 78 -5.6 -4.8048 | opp_overlap 3445685, overlap 3445699 CAAGAGCTGATCGCC GTCGAG CAC CTCGCC TTTTTCATCTACAAA Sde_2719 3447366 - 3446530 - | dihydropteroate synthase TERM 3716 3447405 - 3447389 - R 100 -12.3 -4.68601 | opp_overlap 3447389 ACCTAAAAGAATAAA GACCAGC AGA GCTGGTC TTTGGAAGGACAATA TERM 3717 3447389 - 3447405 + r 100 -12.3 -3.53224 | opp_overlap 3447389 ACCTAAAAGAATAAA GACCAGC AGA GCTGGTC TTTGGAAGGACAATA Sde_2720 3449367 - 3447442 - | membrane protease FtsH catalytic subunit TERM 3718 3447477 - 3447488 + g 70 -2.2 -5.07567 | CGCCTAAGGACGAAT CCGA TGCT TTGG TTTTTTCCGCTGTGC Sde_2721 3450122 - 3449502 - | ribosomal RNA methyltransferase RrmJ/FtsJ Sde_2722 3450221 - 3450592 + | RNA-binding protein Sde_2723 3450717 - 3452165 + | sensor histidine kinase TERM 3719 3452643 - 3452630 - g 72 -5.3 -4.65458 | TACACAAACAAGAAA TTGAG CTTA CTCAA ATCGAATACCGAATG Sde_2724 3452170 - 3452862 + | response regulator receiver domain-containing protein TERM 3720 3453079 - 3453064 - g 72 -6.1 -4.21827 | GCAAAGACGGCAAAA TCGGC TCTGGC GCCGA AAGTATTATTCCTCC Sde_2725 3452865 - 3453335 + | hypothetical protein Sde_2726 3453449 - 3453799 + | hypothetical protein TERM 3721 3453871 - 3453856 - T 100 -10.4 -5.76633 | opp_overlap 3453856 GCAGACATAAAAAAA GCAGGC CTAG GCCTGC TTTTTTTCGCTTAAA TERM 3722 3453856 - 3453871 + T 100 -10.4 -5.53288 | opp_overlap 3453856 GCAGACATAAAAAAA GCAGGC CTAG GCCTGC TTTTTTTCGCTTAAA Sde_2727 3454375 - 3453893 - | GreA/GreB family elongation factor carB 3457624 - 3454391 - | carbamoyl phosphate synthase large subunit TERM 3723 3454630 - 3454648 + g 74 -11 -2.78088 | opp_overlap 3454628 3454624 3454620, overlap 3454629 TCATATCAACAATGT GTGGGCGA CCT TCGCCTAC CTTGTTAACCACTTT TERM 3724 3456512 - 3456526 + g 74 -5.6 -4.58395 | overlap 3456513 CGTGGTTAAGCGCGC ATCGGC ATC GCCGAA TTTTTCGAAAGTAAA TERM 3725 3456513 - 3456525 + g 70 -9.1 -3.34716 | overlap 3456512 GTGGTTAAGCGCGCA TCGGC ATC GCCGA ATTTTTCGAAAGTAA Sde_2729 3458856 - 3457693 - | carbamoyl-phosphate synthase small subunit TERM 3726 3458988 - 3459013 + r 100 -13.3 -4.39133 | opp_overlap 3458988 GCTACTTGCAAAAAA GCGAGGAGAAG ACAG CTTCACCTCGC TTTTGCTAATTCTTG TERM 3727 3459013 - 3458988 - R 100 -13.3 -5.03314 | opp_overlap 3458988 GCTACTTGCAAAAAA GCGAGGAGAAG ACAG CTTCACCTCGC TTTTGCTAATTCTTG TERM 3728 3459292 - 3459270 - R 91 -10.5 -4.15396 | overlap 3459271 3459287 CCGGAAAGTAAAGAA TGCGGCTGC TTAAT GCAGCCGCC ACGGTAATTACTTTA TERM 3729 3459291 - 3459271 - R 100 -14 -3.08514 | overlap 3459270 3459287 CGGAAAGTAAAGAAT GCGGCTGC TTAAT GCAGCCGC CACGGTAATTACTTT Sde_2730 3460106 - 3459300 - | dihydrodipicolinate reductase TERM 3730 3459769 - 3459782 + g 70 -2.3 -4.91511 | opp_overlap 3459778 3459779, overlap 3459767 ACTGTACTTGCGTCG GCTTC GAAA GCAGC TTTTTCTGCTGGGCT TERM 3731 3459802 - 3459824 + g 72 -5.6 -4.43624 | opp_overlap 3459802 TCTGCTGGGCTAAAC CCTGTGGT ACCAACA ACCATAGG TTTGTTATGTGCTTT TERM 3732 3460021 - 3459989 - G 72 -10.5 -2.93853 | opp_overlap 3459990, overlap 3459988 CCGCGCCAACCAAAC TGCTGTCTGGCGCCA CAA TGGCGGCACCCAGCA CGGCGTCTTCACTTT Sde_2731 3460743 - 3460165 - | hypothetical protein TERM 3733 3460785 - 3460810 + r 88 -12.5 -2.6027 | opp_overlap 3460775 3460774 3460786 3460787, overlap 3460783 AATACCGGGCAAAGA ATGCGCGAGGG TACA CCCTCGCGCGC TGACTTACATTTTCA TERM 3734 3460809 - 3460786 - R 100 -13.8 -3.91984 | opp_overlap 3460785 3460783, overlap 3460775 3460774 3460787 ATACCGGGCAAAGAA TGCGCGAGGG TACA CCCTCGCGCG CTGACTTACATTTTC TERM 3735 3460808 - 3460787 - R 100 -17.3 -2.94708 | opp_overlap 3460785 3460783, overlap 3460775 3460774 3460786 TACCGGGCAAAGAAT GCGCGAGGG TACA CCCTCGCGC GCTGACTTACATTTT Sde_2732 3461939 - 3460815 - | dnaJ protein TERM 3736 3461366 - 3461390 + g 83 -10.7 -3.75817 | overlap 3461364 GGTCGGTAATCATTT TGCCCTGACCG CGA CAGTTAGGGCA TGTTTGTTGTACCGA TERM 3737 3461638 - 3461590 - G 93 -12.4 -3.75897 | gap 2, opp_overlap 3461589 AAGGTGTAACGCAAA TCGGAGCCGCGCGATGGCCCACCG CGA CGACG-GCCACCGC-CGCCACCGA ATATATCGCCGAATA TERM 3738 3462010 - 3462035 + r 83 -11.9 -2.72049 | opp_overlap 3462011 3462015, overlap 3462015 TATTAGCTACAAAAC ATAAACGCGGG CAGG CCCGCGTTTAG TCGTTCGGCCCTATA TERM 3739 3462034 - 3462011 - R 100 -15.4 -3.82519 | opp_overlap 3462010 3462015, overlap 3462015 ATTAGCTACAAAACA TAAACGCGGG CAGG CCCGCGTTTA GTCGTTCGGCCCTAT TERM 3740 3462030 - 3462015 - R 100 -11.8 -4.51238 | opp_overlap 3462015 3462010, overlap 3462011 GCTACAAAACATAAA CGCGGG CAGG CCCGCG TTTAGTCGTTCGGCC TERM 3741 3462015 - 3462030 + r 100 -11.8 -3.84246 | opp_overlap 3462011 3462015, overlap 3462010 GCTACAAAACATAAA CGCGGG CAGG CCCGCG TTTAGTCGTTCGGCC Sde_2733 3464026 - 3462095 - | dnaK protein TERM 3742 3462315 - 3462340 + g 88 -8.4 -4.80882 | GCTGCTTCTTCGGCT TCTGCAATTG CGCTTT CGATTGCAGA TTTTTCGTCTGCCGT TERM 3743 3464052 - 3464074 + r 80 -9.8 -3.71527 | CACCTTTTGTATCTG TATCCAGCGC CTG GCGCTGGGCA TTTCAATCGTTAACA TERM 3744 3464200 - 3464186 - R 70 -7.2 -3.76411 | opp_overlap 3464185 CTAAAACCATTTAAA GTAAGA AAT TCTTAC GCTTTAGATACCACC Sde_2734 3464781 - 3464197 - | GrpE protein TERM 3745 3464569 - 3464602 + g 85 -7.3 -4.96388 | overlap 3464562 3464549 CTCGGCTCTGCGACG CGCGTTTTGCGCTTC GGCG GCAGCGCGCAAGGCG TTTTCTTTAGTGGTT Sde_2735 3464973 - 3466646 + | alkylhydroperoxidase AhpD core TERM 3746 3466711 - 3466688 - T 100 -9.6 -5.8901 | opp_overlap 3466688 ATACAAAATAAAAAA GCTTGCAGAG TTAC CCCTACAAGC TTTCAGGCTGGTCAT TERM 3747 3466805 - 3466780 - T 100 -11.3 -4.89233 | opp_overlap 3466779 3466778 GAGGAAGATCAAAAA TGCTCAATTCA TGGA CGAATTGAGCA AGTTATAGGGACATA TERM 3748 3466940 - 3466917 - T 78 -9.6 -3.66356 | opp_overlap 3466917, overlap 3466895 3466891 ATCCGTAATCTGAAA GCTTACAGAG TTAC CCCTGCAAGC TGTTGCAATAACACG Sde_2736 3467373 - 3466966 - | helix-turn-helix, AraC type Sde_2737 3467454 - 3467849 + | small protein A (tmRNA-binding)-like TERM 3749 3467852 - 3467866 + T 72 -6.4 -4.35042 | opp_overlap 3467851 CAAAATGAAATAACC CGCTTT TAA GAAGCG TTATTTTCTCATCAC TERM 3750 3467882 - 3467922 + T 83 -9.3 -3.91897 | gap 1, opp_overlap 3467883 3467893, overlap 3467883 3467893 TTATTTTCTCATCAC ACATAAAAAAA-CCGAGC CATTTT GCTCGGTTTTTTTTATGA TTTATACCTGCCCAC TERM 3751 3467883 - 3467921 + T 95 -12.8 -2.94924 | gap 1, opp_overlap 3467883 3467893, overlap 3467882 3467893 TATTTTCTCATCACA CATAAAAAAA-CCGAGC CATTTT GCTCGGTTTTTTTTATG ATTTATACCTGCCCA TERM 3752 3467921 - 3467883 - T 91 -12.8 -2.78596 | gap 1, opp_overlap 3467882 3467883 3467893, overlap 3467893 TATTTTCTCATCACA CATAAAAAAA-CCGAGC CATTTT GCTCGGTTTTTTTTATG ATTTATACCTGCCCA TERM 3753 3467893 - 3467910 + T 100 -8.4 -6.04378 | opp_overlap 3467893 3467883, overlap 3467883 3467882 TCACACATAAAAAAA CCGAGC CATTTT GCTCGG TTTTTTTTATGATTT TERM 3754 3467910 - 3467893 - T 100 -8.4 -5.76633 | opp_overlap 3467883 3467882 3467893, overlap 3467883 TCACACATAAAAAAA CCGAGC CATTTT GCTCGG TTTTTTTTATGATTT Sde_2738 3468272 - 3467946 - | hypothetical protein Sde_2739 3468751 - 3468320 - | hypothetical protein Sde_2740 3470128 - 3468755 - | sodium-dependent transporter family protein TERM 3755 3470350 - 3470340 - g 95 -3.2 -6.01725 | AACAAAAAGAAAAAA CCAC AAA GTAG CACCATTGCCCAAAA TERM 3756 3470459 - 3470442 - g 72 -5.5 -4.4078 | overlap 3470444 GGCTGGGAAGTAAAA GCCTTGC GCGC GCAACGC GGCCAAATGACAGAA TERM 3757 3470625 - 3470614 - g 70 -2.2 -4.92385 | GAGAGCTAAACAAAA TAGC TGAA GCCA AAGATCAAAAAGGCT smpB 3470304 - 3470792 + | SsrA-binding protein TERM 3758 3470831 - 3470847 + T 100 -12.3 -6.04324 | opp_overlap 3470831 GATTCAAATAAAAAA GGTCGCA GCG TGCGACC TTTTTTATTTTTTAA TERM 3759 3470847 - 3470831 - T 100 -12.3 -5.65927 | opp_overlap 3470831 GATTCAAATAAAAAA GGTCGCA GCG TGCGACC TTTTTTATTTTTTAA Sde_2742 3471362 - 3470910 - | hypothetical protein TERM 3760 3471463 - 3471451 - H 86 -7.7 -4.72986 | overlap 3471461 CATTGCTAGCAAAAA GCGTA TAC TACGC AACTGCTCGCGGAAC TERM 3761 3471807 - 3471820 + H 77 -4.5 -5.06816 | opp_overlap 3471807 TACGGTGCTCAACTA GCTGC GTAA GTAGC TTTTTGTTACACCAT TERM 3762 3471833 - 3471856 + H 76 -6.6 -4.57569 | opp_overlap 3471835, overlap 3471835 AGCTTTTTGTTACAC CATCTAGCGG TACG CCGCTAGCGG TTTTTAACAAGGTGC TERM 3763 3472131 - 3472108 - H 72 -8 -3.88787 | opp_overlap 3472108 3472116 TTAGACGTCCAGAAA GCCACTCCCC ACAA GGGTTGTGGC TTTTTTTATGTCCGC TERM 3764 3472108 - 3472131 + H 100 -8 -5.71712 | opp_overlap 3472108, overlap 3472116 TTAGACGTCCAGAAA GCCACTCCCC ACAA GGGTTGTGGC TTTTTTTATGTCCGC TERM 3765 3472116 - 3472130 + H 77 -8.6 -4.01943 | opp_overlap 3472108, overlap 3472108 CCAGAAAGCCACTCC CCACAA GGG TTGTGG CTTTTTTTATGTCCG TERM 3766 3473077 - 3473065 - g 77 -3.3 -5.14965 | overlap 3473067 ATCCGTATGAAAAAA CGCAG AGA CCACG CTGTACCACTCACAC Sde_2743 3472237 - 3473490 + | phage integrase Sde_2744 3473480 - 3474088 + | hypothetical protein Sde_2745 3474191 - 3474469 + | phage transcriptional regulator, AlpA TERM 3767 3474723 - 3474747 + G 76 -2.1 -5.42259 | CTTGTTTTCGATTAC CTATTGAGGTT TCA GACTGCAGTAG TTTTTTTCAACGTAG TERM 3768 3474817 - 3474801 - g 79 -2.1 -5.47914 | opp_overlap 3474812, overlap 3474802 AAAAAGCACAAAAAA GGAGCAC GAC GGGCTCG AGGCCATTTTACGGC Sde_2746 3474486 - 3475280 + | hypothetical protein Sde_2747 3475643 - 3476815 + | hypothetical protein Sde_2748 3476808 - 3479084 + | hypothetical protein TERM 3769 3480268 - 3480280 + G 71 -7.7 -3.86252 | overlap 3480277 GAAAAGCATTTTGAC TGGCT TTT AGCCA TTATCTTTGATGAGG Sde_2749 3479875 - 3480465 + | hypothetical protein TERM 3770 3481060 - 3481017 - T 100 -20.6 -3.72576 | opp_overlap 3481028, overlap 3481028 CCCCGCCCCACCAAA CCAATAAAAAAGCCTCACCC GCAA GGGTGGAGCTTTTTTATTGG CTGTGAGCCTGAGCT TERM 3771 3481049 - 3481028 - T 100 -7.9 -5.59655 | opp_overlap 3481028, overlap 3481017 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGAGC TTTTTTATTGGCTGT TERM 3772 3481028 - 3481049 + T 100 -7.9 -5.49234 | opp_overlap 3481028 3481017 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGAGC TTTTTTATTGGCTGT TERM 3773 3481290 - 3481268 - T 80 -2.5 -5.5112 | opp_overlap 3481269, overlap 3481269 CCCACCAATAAAAAA GCCTCACCC GAAAG GGGCGGGGT TTTGTATTGGCTGAA TERM 3774 3481269 - 3481289 + T 75 -6 -4.68724 | opp_overlap 3481268 3481269 CCACCAATAAAAAAG CCTCACCC GAAAG GGGCGGGG TTTTGTATTGGCTGA Sde_2750 3481774 - 3481448 - | hypothetical protein Sde_2751 3482049 - 3481774 - | ATPase TERM 3775 3482169 - 3482190 + r 100 -13.1 -5.64274 | opp_overlap 3482169 CCACCAAATTAAAAA GGTGAACTG ATCT CAGTTCACC TTTTTTTATGCCTGC TERM 3776 3482190 - 3482169 - R 100 -13.1 -5.01811 | opp_overlap 3482169 CCACCAAATTAAAAA GGTGAACTG ATCT CAGTTCACC TTTTTTTATGCCTGC Sde_2752 3484627 - 3482579 - | putative ATP-dependent Lon protease Sde_2753 3486958 - 3484631 - | hypothetical protein TERM 3777 3485376 - 3485392 + g 82 -7.9 -4.60487 | overlap 3485372 3485378 GCCAACTTCTGCCAG CCGCTGG TTT CCAGCAG TTTTTGAAAATGATG TERM 3778 3486146 - 3486162 + g 79 -10.9 -3.40775 | overlap 3486144 AGGCAGCGCTGTTTT TTCCAGC AGC GCTGGAA TGTTTGGGTAACGCT Sde_2754 3487629 - 3486955 - | hypothetical protein Sde_2755 3488738 - 3487626 - | hypothetical protein TERM 3779 3488429 - 3488405 - G 80 -6.5 -4.86731 | gap 1, overlap 3488390 3488386 3488407 GCCCTTTAAAGAAAA GAGCTTCACG AGCAAA CGTGAAGC-C ACCATCTGCTGTGGT TERM 3780 3488428 - 3488407 - G 87 -10.2 -4.05678 | overlap 3488390 3488386 3488405 CCTTTAAAGAAAAGA GCTTCACG AGCAAA CGTGAAGC CACCATCTGCTGTGG Sde_2756 3492228 - 3488740 - | hypothetical protein TERM 3781 3491017 - 3491040 + g 73 -8 -4.04773 | GATGCTGAGGTTTTG CTTGCCGCCC ATGT GCGCGGCCAG TTGTTTCCATTCTTC TERM 3782 3491314 - 3491303 - G 73 -2.2 -5.14563 | overlap 3491288 GCGGCCACCAAAAAA TGGC CGGA ACCA CAGCTTGGATCGAGG TERM 3783 3491429 - 3491449 + g 73 -7.6 -4.08394 | gap 1, overlap 3491444 CGCAAATATTCCAGA GGCACGCCA TCAA TGGC-TGCC TTTTGGCGCAGCTCT TERM 3784 3492186 - 3492199 + g 71 -3.8 -4.86001 | TAACCGTGTTTTCCA GCTG ACTGCG CAGC TTTTTATCCAGTGGT Sde_2757 3495679 - 3492242 - | hypothetical protein TERM 3785 3493608 - 3493636 + g 85 -12.4 -3.41978 | overlap 3493595 3493600 3493621 3493625 TTGGATTCGGCCATT GCCTGAGCCGTT TGCAT GGCGGCTCGGGC TTCCTTGCCTTCTGG Sde_2758 3496243 - 3495695 - | hypothetical protein TERM 3786 3495808 - 3495797 - G 77 -3.6 -5.14563 | GCTGCCAGGAAAAAA CACC AGCA GGCG GCCAGGCACCATTGG Sde_2759 3496946 - 3496230 - | hypothetical protein TERM 3787 3496473 - 3496448 - G 83 -9 -4.27617 | opp_overlap 3496447 3496446 3496450 GATAGGCCATTAAAA GTGCGAAGCA TACAGC TGCTTCGCTC GCTTCTGATGTGCAG TERM 3788 3496450 - 3496471 + g 71 -10.2 -2.6252 | opp_overlap 3496448, overlap 3496447 3496446 TAGGCCATTAAAAGT GCGAAGCA TACAGC TGCTTCGC TCGCTTCTGATGTGC Sde_2760 3497205 - 3497002 - | putative transcriptional regulator TERM 3789 3498760 - 3498726 - g 73 -4.2 -4.89477 | overlap 3498727 CGGCCAAGAAGAAAA GCGGGCGCCGATAC CGGTATT ACATCAGCACCCGG GACACTAAGGAGTTT Sde_2762 3497771 - 3499120 + | cellulose binding, type IV TERM 3790 3499247 - 3499214 - g 85 -6.7 -5.14563 | gap 1, overlap 3499215 TTTTTCAGGAAAAAA TTTGGACCGCTCTGCG GGC CGCAAAGCGG-CGAAC CCCAAGGACGGGGTG TERM 3791 3499246 - 3499215 - g 83 -10.2 -3.68256 | gap 1, overlap 3499214 TTTTCAGGAAAAAAT TTGGACCGCTCTGCG GGC CGCAAAGCGG-CGAA CCCCAAGGACGGGGT TERM 3792 3499284 - 3499272 - g 76 -7.7 -4.24342 | opp_overlap 3499271 3499276, overlap 3499276 GGGGTGAGCAACAAA GGTAG CGG CTACC ACTTTGAGCTCGAGC TERM 3793 3499370 - 3499388 + G 83 -13.1 -3.18681 | opp_overlap 3499365 3499364 GACCATAAACCTGAA GCGCCGC AGCGG GCGGCGC TTGATCACCTTGCCG Sde_2763 3499191 - 3499709 + | hypothetical protein TERM 3794 3499743 - 3499761 + T 73 -8.8 -3.54459 | ACACTAGCTGCCCCT TGCCGGTG TCA CAACGGCA TTTACGAAAAATTGG Sde_2764 3500279 - 3499818 - | hypothetical protein TERM 3795 3500181 - 3500204 + g 79 -2.4 -5.5454 | gap 1, opp_overlap 3500179, overlap 3500185 CAAATCAAACTGATC GTGAGC-CACA AGG TGTGTGCGTAC TTTTTGTTTATTTAA TERM 3796 3500303 - 3500327 + r 71 -9.9 -2.69473 | opp_overlap 3500303 3500300 3500299, overlap 3500302 ACTCATTAAAAGCCA GGGGAAAACGC ATT GCGCCTTCCCC CTTGTACTACTTTGA TERM 3797 3500327 - 3500303 - R 95 -14.3 -2.78049 | opp_overlap 3500302 3500303, overlap 3500300 3500299 ACTCATTAAAAGCCA GGGGAAAACGC ATT GCGCCTTCCCC CTTGTACTACTTTGA Sde_2765 3500711 - 3500334 - | TonB-dependent siderophore receptor Sde_2766 3501211 - 3500759 - | hypothetical protein Sde_2767 3501534 - 3501301 - | hypothetical protein Sde_2768 3502107 - 3501556 - | VCBS Sde_2769 3502323 - 3503216 + | AraC family transcriptional regulator Sde_2770 3503787 - 3503203 - | 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Sde_2771 3504452 - 3503976 - | hypothetical protein Sde_2772 3505124 - 3504504 - | response regulator receiver domain-containing protein TERM 3798 3504972 - 3504955 - G 72 -5.5 -4.4648 | overlap 3504962 3504963 ACCGTTATCAGAAAA GCGAGAA TGCC TGCTCGC AGCAGACCATGGTGT Sde_2773 3506153 - 3505203 - | hypothetical protein TERM 3799 3507009 - 3506999 - g 71 -6.8 -4.13304 | AAACGATCTTGAAAA CCAG AAA CTGG TACCCCTGCTGACCG TERM 3800 3507101 - 3507078 - g 72 -8.8 -3.64703 | overlap 3507089 CCCCCCGGACGCAAA CAGCCAGCGA AGGT TCGCCTGCTG GTGGCACACCTCGAA Sde_2774 3506253 - 3507149 + | LysR family transcriptional regulator Sde_2775 3507278 - 3508267 + | cyclase Sde_2776 3508296 - 3508943 + | Ricin B lectin TERM 3801 3509155 - 3509112 - T 100 -24.2 -3.81287 | opp_overlap 3509123, overlap 3509123 TACAGCACCACCAAA CCAATAAAAAAGCCTCACCC GCAA GGGTGGGGCTTTTTTATTGG CTGTGAGCCTGAGCT TERM 3802 3509144 - 3509123 - T 100 -11.5 -5.59655 | opp_overlap 3509123, overlap 3509112 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGGGC TTTTTTATTGGCTGT TERM 3803 3509123 - 3509144 + T 100 -13.7 -5.49234 | opp_overlap 3509112 3509123 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGGGC TTTTTTATTGGCTGT TERM 3804 3509298 - 3509332 + T 85 -9.5 -4.15044 | gap 1, opp_overlap 3509298 CCACCACCTTGTAAA TAGCCCTAATGAGC CCTCACCA GC-CATTAGGGCTA TTTATTAACCCACAA TERM 3805 3509332 - 3509298 - T 80 -10.2 -3.56092 | gap 1, opp_overlap 3509298 CCACCACCTTGTAAA TAGCCCTAATGAGCC CTCACC AGC-CATTAGGGCTA TTTATTAACCCACAA Sde_2777 3509641 - 3509402 - | transposase Sde_2778 3510659 - 3510162 - | hypothetical protein TERM 3806 3510452 - 3510466 + g 71 -7.8 -3.97043 | overlap 3510453 AGTTGTCATTCCAAT TCCTGG TTT CCAGGG TTGTTATCTCTTCAG TERM 3807 3511035 - 3511049 + r 73 -2.8 -5.23943 | overlap 3511037 ATAATTGACATCATT TAGCAA TTC TTGCGA TTTATTTTTTTCGTA Sde_2779 3511840 - 3511220 - | prolyl 4-hydroxylase, alpha subunit TERM 3808 3511724 - 3511714 - G 74 -5.4 -4.6468 | GGAAATTATATAAAA CTAC ACC GTAG CCGCTTGTCGAAGCT TERM 3809 3512364 - 3512378 + r 76 -10 -3.27704 | overlap 3512356 TCTGGTGGCAACTCT TGCTGC TTG GCAGCA TTCGCTTTGACCGCT TERM 3810 3512576 - 3512600 + r 100 -9.3 -4.60924 | opp_overlap 3512575, overlap 3512596 GTCGAGCCAATCCAC CTCCGACGATT GCA ACTTGTCGGAG TTTTTACCCCGTTTG TERM 3811 3514014 - 3514044 + r 100 -7.6 -5.27335 | gap 1, opp_overlap 3514014 3514024 ACCACCTTGTAACTA GCCCTAATGAGCC CTCACC GGC-CAGTAGGGC TTTTTATTTACCCAC Sde_2781 3514732 - 3514112 - | TetR family transcriptional regulator Sde_2782 3514849 - 3516054 + | multidrug resistance efflux pump-like TERM 3812 3517093 - 3517128 + G 74 -8.2 -3.96327 | opp_overlap 3517089 3517093, overlap 3517095 TCATTTATGAAGTGA TGTCCACAGCGACGGG TTTA CCCGTGGCGATGGATA TTTCTCGTGCAAGCT TERM 3813 3517225 - 3517209 - g 76 -7.9 -4.25283 | opp_overlap 3517209 3517208 ACGCGGCGACTAAAA TCCGCCG ACC CTGCGGA GCTTTTTTAATGCAC Sde_2783 3516054 - 3517235 + | ABC transporter, membrane spanning subunit, devC-like TERM 3814 3517679 - 3517663 - g 70 -5.1 -4.4767 | overlap 3517648 TTACCTACCAGAAAA TTTGTCC GGC GGGCAAA AGCAGCGTGTTGCTA Sde_2784 3517235 - 3517918 + | heterocyst specific ABC-transporter, ATP-binding subunit DevA-like TERM 3815 3518229 - 3518195 - T 76 -9.4 -3.56092 | gap 1, opp_overlap 3518197, overlap 3518197 CCACCATCTTGTAAA TAGCCCTAATGAGCC CTCACC GGC-CATTAGGGCTT TTTATTAACCCGCAA TERM 3816 3518197 - 3518227 + T 100 -12 -5.06414 | gap 1, opp_overlap 3518195 3518197 ACCATCTTGTAAATA GCCCTAATGAGCC CTCACC GGC-CATTAGGGC TTTTTATTAACCCGC TERM 3817 3518227 - 3518197 - T 89 -12 -3.35775 | gap 1, opp_overlap 3518197, overlap 3518195 ACCATCTTGTAAATA GCCCTAATGAGCC CTCACC GGC-CATTAGGGC TTTTTATTAACCCGC Sde_2785 3518497 - 3518297 - | hypothetical protein TERM 3818 3518527 - 3518545 + H 73 -7.4 -4.18676 | opp_overlap 3518529, overlap 3518529 ATATTTTAGTTGATA CAGTCCCA TTT TGGGACTA TTATTTACTTTATGA TERM 3819 3518529 - 3518543 + H 80 -10 -3.67482 | opp_overlap 3518529, overlap 3518527 ATTTTAGTTGATACA GTCCCA TTT TGGGAC TATTATTTACTTTAT TERM 3820 3518543 - 3518529 - H 72 -10 -2.89683 | opp_overlap 3518527 3518529 ATTTTAGTTGATACA GTCCCA TTT TGGGAC TATTATTTACTTTAT Sde_2786 3518557 - 3518862 + | hypothetical protein TERM 3821 3518853 - 3518839 - f 74 -5 -4.88228 | opp_overlap 3518839, overlap 3518832 3518830 ACGCAATACGAAAAA TTCGTC GGG AACGAA TTTTCATGAGCGAAG Sde_2787 3518965 - 3519336 + | hypothetical protein TERM 3822 3519609 - 3519586 - f 77 -11.1 -2.82623 | opp_overlap 3519591, overlap 3519583 3519591 3519601 CGCTTGCGATAACGA CAAAACGGC AGGACA GCCGTTTTG CACAGCTTCAGCTGC TERM 3823 3519604 - 3519591 - f 73 -5.2 -4.58466 | opp_overlap 3519591, overlap 3519586 3519583 3519601 GCGATAACGACAAAA CGGC AGGACA GCCG TTTTGCACAGCTTCA Sde_2790 3520311 - 3520646 + | hypothetical protein Sde_2791 3521767 - 3521396 - | Cyanase Sde_2792 3523179 - 3522223 - | serine/threonine protein kinase TERM 3824 3522260 - 3522279 + g 74 -7.1 -4.27192 | opp_overlap 3522254 CTTTTATAAGCGTAA GGGTGGG CTAGCT CCCACTC TTTTGCTAGGCGTTT TERM 3825 3522859 - 3522882 + g 71 -6.8 -4.11692 | overlap 3522860 TTTACCTGGAGCCGA TGCAGTGAAT TTTA ATTCATTGCG TTTTAGCGCTGCCTG Sde_2793 3523466 - 3523176 - | hypothetical protein Sde_2794 3523872 - 3523528 - | hypothetical protein TERM 3826 3524647 - 3524600 - R 91 -7.8 -4.76874 | opp_overlap 3524599 3524604 AACACAAAAGCAAAA CCAACGCTGAGAGCTTGATA CAAAGTAC TATCAACCACCCAGCGTTCG CTTAGATTTACCGCT TERM 3827 3524689 - 3524699 + r 82 -8.2 -4.34947 | opp_overlap 3524689 3524688, overlap 3524688 CACAAATAGCAAAAT GCGC GGC GCGC TTTTCATCCTATCTT Sde_2795 3527481 - 3524743 - | hypothetical protein TERM 3828 3527433 - 3527415 - G 75 -9.6 -3.57561 | CGGCAAGGCTTGAAA TCGTCTGC TGG GCAAACGA AGCCTGACTTATTAA TERM 3829 3527461 - 3527451 - G 79 -8.2 -4.2828 | CCTGACTTATTAAAA GGCC TAA GGCC AAAAACAGGATTTTT TERM 3830 3527715 - 3527684 - H 83 -8.8 -4.2074 | gap 1, opp_overlap 3527684 3527685, overlap 3527685 TGGGTAAGAGAGAAA CTGGCT-CGCTGCTA GGG TACCAGCGCAGCCAA TTTGCTATGAACCCC TERM 3831 3527714 - 3527685 - H 74 -10.1 -3.11962 | gap 1, opp_overlap 3527684 3527685, overlap 3527684 GGGTAAGAGAGAAAC TGGCT-CGCTGCTA GGG TACCAGCGCAGCCA ATTTGCTATGAACCC TERM 3832 3527685 - 3527714 + H 72 -10.1 -2.89602 | gap 1, opp_overlap 3527685 3527684, overlap 3527684 GGGTAAGAGAGAAAC TGGCT-CGCTGCTA GGG TACCAGCGCAGCCA ATTTGCTATGAACCC Sde_2796 3527748 - 3528329 + | transcription factor jumonji, jmjC TERM 3833 3528368 - 3528426 + T 72 -7.59999 -3.87994 | opp_overlap 3528386, overlap 3528370 3528371 GAAGAACTAATACTT TCT-TTGACAGCCCCAGAAGTCGACTGC CTCAA GCAGTTGGCTTCTGGGGCC-TCAATATC TTTCTCCCGATACAT TERM 3834 3528370 - 3528424 + T 100 -14.6 -3.52906 | opp_overlap 3528386, overlap 3528368 3528371 AGAACTAATACTTTC T-TTGACAGCCCCAGAAGTCGACTGC CTCAA GCAGTTGGCTTCTGGGGCC-TCAATA TCTTTCTCCCGATAC TERM 3835 3528371 - 3528422 + T 100 -19.7 -3.33798 | gap 1, opp_overlap 3528386, overlap 3528370 3528368 GAACTAATACTTTCT TTGACAGCCCCAGAAGTCGACTGC CTCAA GCAGTTGGCTTCTGGGGCC-TCAA TATCTTTCTCCCGAT Sde_2797 3528564 - 3528349 - | hypothetical protein TERM 3836 3528784 - 3528741 - H 100 -20.6 -3.78775 | opp_overlap 3528752 3528754 3528783, overlap 3528752 CGCCCCACCACCAAA CCAATAAAAAAGCCTCACCC GCAA GGGTGGGACTTTTTTATTGG CTGTGAGCCTGACTT TERM 3837 3528752 - 3528773 + H 100 -7.9 -5.49234 | opp_overlap 3528741 3528752, overlap 3528754 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGGAC TTTTTTATTGGCTGT TERM 3838 3528773 - 3528752 - H 100 -7.9 -5.59655 | opp_overlap 3528752 3528754, overlap 3528741 CAAACCAATAAAAAA GCCTCACCC GCAA GGGTGGGAC TTTTTTATTGGCTGT Sde_2798 3529208 - 3531268 + | TonB-dependent receptor TERM 3839 3531296 - 3531314 + F 73 -8.8 -3.51202 | opp_overlap 3531296, overlap 3531288 TTTATACCTAAAAAA GCCCGC CTCTGTT GCGGGC TTAATTCGTTTAGTG TERM 3840 3531314 - 3531296 - f 100 -8.8 -5.1287 | opp_overlap 3531296 3531288 TTTATACCTAAAAAA GCCCGC CTCTGTT GCGGGC TTAATTCGTTTAGTG Sde_2799 3531340 - 3532455 + | cellulose binding, type IV Sde_2800 3533869 - 3533063 - | hypothetical protein TERM 3841 3534243 - 3534262 + r 100 -12.2 -4.20288 | opp_overlap 3534243 CCGTACATAAAAAAA TAGCGCTC CGAG GAGCGCTA TTTAATTTGATTTTA TERM 3842 3534262 - 3534243 - R 100 -12.2 -5.71712 | opp_overlap 3534243 CCGTACATAAAAAAA TAGCGCTC CGAG GAGCGCTA TTTAATTTGATTTTA Sde_2801 3536311 - 3534296 - | dystroglycan-type cadherin-like Sde_2802 3538174 - 3537071 - | phosphoribosylaminoimidazole carboxylase Sde_2803 3538682 - 3538176 - | phosphoribosylaminoimidazole carboxylase TERM 3843 3538647 - 3538665 + g 76 -8.8 -3.67517 | CTTGGAGCCCATTAT CACGCCCA CAA TGGGAGTG TTTGGCGTATTACTC Sde_2804 3539029 - 3539970 + | LysR family transcriptional regulator Sde_2805 3540356 - 3540021 - | response regulator receiver domain-containing protein Sde_2806 3540699 - 3540448 - | hypothetical protein TERM 3844 3540747 - 3540732 - H 75 -5.4 -4.84363 | overlap 3540736 GTAAATTACGAAAAA CTGACA CAGC TGCCAG CTATATATACCCACA TERM 3845 3541402 - 3541391 - g 71 -7.2 -4.03234 | TTTGCCCCATACAAA GCCG TGCC CGGC ACACTACTGGCAGAC TERM 3846 3542399 - 3542380 - g 74 -7.2 -4.28977 | overlap 3542381 ACAACACATGCAAAA CTACAAGC AGCA GCTTGTAA GCCTCGTAAAACAAA Sde_2807 3540956 - 3542467 + | tryptophan halogenase, putative Sde_2808 3543690 - 3542482 - | hypothetical protein TERM 3847 3544523 - 3544493 - g 82 -13.2 -3.09648 | opp_overlap 3544499 CAACATAGTGCAATA CCCCTACTGGGGAG GCG CCCCCCAGTTGTGG ACAATTACAGATCAA TERM 3848 3544499 - 3544517 + G 77 -10.2 -3.31322 | opp_overlap 3544493 AGTGCAATACCCCTA CTGGGGAG GCG CCCCCCAG TTGTGGACAATTACA TERM 3849 3545898 - 3545884 - g 73 -4.2 -4.74103 | TGGCCAACGTAAAAA GCAACC CAA GCTTGC CACTGTTCGACGACG Sde_2809 3544131 - 3546500 + | ATPase Sde_2810 3546753 - 3547319 + | alkyl hydroperoxide reductase, C subunit Sde_2811 3547392 - 3549008 + | alkyl hydroperoxide reductase, F subunit TERM 3850 3549076 - 3549107 + T 100 -11.8 -5.55769 | opp_overlap 3549076 GTGATGCAAACTAAA GAGTAAACTCTATA TGGA TATAGAGATTACTC TTTTTTATTATCCAC TERM 3851 3549107 - 3549076 - T 100 -11.8 -4.08485 | opp_overlap 3549076 GTGATGCAAACTAAA GAGTAAACTCTATA TGGA TATAGAGATTACTC TTTTTTATTATCCAC Sde_2812 3549833 - 3549153 - | putative hydroxylase TERM 3852 3549579 - 3549559 - G 72 -6.1 -4.36262 | opp_overlap 3549559, overlap 3549560 ACATGCACACCAAAA CTGCGACCA CCT TGGTAGCAA TTAAATAATGGCGGG TERM 3853 3549882 - 3549917 + r 73 -6 -4.43877 | opp_overlap 3549884, overlap 3549883 3549884 ATTTCAGATACAACA AAGCGGCGAGCTTTAC TTAA GTAAAACCCGCCGCCC TTTATTTACCGATTA TERM 3854 3549883 - 3549916 + r 74 -9.5 -3.25603 | opp_overlap 3549884, overlap 3549882 3549884 TTTCAGATACAACAA AGCGGCGAGCTTTAC TTAA GTAAAACCCGCCGCC CTTTATTTACCGATT TERM 3855 3549915 - 3549884 - R 100 -17.4 -4.42974 | opp_overlap 3549883 3549882 3549884 TTCAGATACAACAAA GCGGCGAGCTTTAC TTAA GTAAAACCCGCCGC CCTTTATTTACCGAT TERM 3856 3549884 - 3549915 + r 90 -13 -2.54639 | opp_overlap 3549884, overlap 3549883 3549882 TTCAGATACAACAAA GCGGCGAGCTTTAC TTAA GTAAAACCCGCCGC CCTTTATTTACCGAT Sde_2813 3552161 - 3549930 - | molybdate ABC transporter permease TERM 3857 3552222 - 3552186 - H 76 -7.9 -4.17296 | opp_overlap 3552197, overlap 3552187 CCCTAGATAGATAAA GTTTCTAGGGTGCGGCG TAT CGCTTCTCCCTAGAAAG GCCGCGACAATACCA TERM 3858 3552221 - 3552187 - H 84 -11.4 -3.09896 | opp_overlap 3552197, overlap 3552186 CCTAGATAGATAAAG TTTCTAGGGTGCGGCG TAT CGCTTCTCCCTAGAAA GGCCGCGACAATACC TERM 3859 3552527 - 3552503 - g 72 -8.5 -3.67775 | overlap 3552489 AGGCTTACGCAACAA TGGCTAGCCAC CGA GCAGCAAGCCA GCGCGTTAATGTCGG TERM 3860 3552620 - 3552602 - g 74 -6 -4.66833 | CTGCAAGCCGAAAAA GAACAGCT ATT AGCCATTC TCAAGCAAAGCGATG Sde_2814 3552389 - 3553192 + | molybdate ABC transporter ATP-binding protein TERM 3861 3553429 - 3553406 - g 81 -3.8 -5.31275 | gap 1 CTCTACGAGAAAAAA CAGCTGTAGCG CGA CGCTT-AGCCG ACGAAAAAACGCTAA TERM 3862 3553740 - 3553728 - g 70 -4.8 -4.48317 | GGATAAAACAAACAA CAGC GTAGG GCTG GCCAGCAAAAGAGAA TERM 3863 3554134 - 3554153 + G 79 -9.2 -4.04579 | opp_overlap 3554134 GGCGCAAACACAAAA TCGGCGCG CGAA CGCGACGA TTTGCTGTTTATGCA TERM 3864 3554153 - 3554134 - g 93 -9.2 -4.78848 | opp_overlap 3554134 GGCGCAAACACAAAA TCGGCGCG CGAA CGCGACGA TTTGCTGTTTATGCA Sde_2815 3553189 - 3554583 + | biopolymer transport proteins-like Sde_2816 3554580 - 3554975 + | hypothetical protein Sde_2817 3554980 - 3555387 + | biopolymer transport protein (ExbD2) Sde_2818 3555400 - 3556059 + | hypothetical protein TERM 3865 3556411 - 3556379 - g 85 -5.5 -5.37043 | overlap 3556382 3556384 ACGCGACATAAAAAA TGACAGCGCAGCT TTACGGC AACTGCGCGGGCA AATACTGCTTAGCAT Sde_2819 3556071 - 3557486 + | hypothetical protein Sde_2820 3557492 - 3558745 + | hypothetical protein TERM 3866 3558820 - 3558786 - T 81 -11.5 -2.85987 | opp_overlap 3558786, overlap 3558783 3558781 ATGTAAAAGATAGGA CGACCAGCTGTTAGC CTAAC ACTAGCAACTGGTCG TTATTAGATATGCGC TERM 3867 3558786 - 3558820 + T 84 -10.8 -3.70773 | opp_overlap 3558786 3558783 3558781 ATGTAAAAGATAGGA CGACCAGCTGTTAG CCTAACA CTAGCAACTGGTCG TTATTAGATATGCGC Sde_2821 3559418 - 3558852 - | elongation factor P Sde_2822 3559635 - 3560336 + | heat shock protein DnaJ-like Sde_2823 3560883 - 3560389 - | response regulator receiver domain-containing protein TERM 3868 3560954 - 3560938 - R 100 -8.7 -4.97158 | opp_overlap 3560937 TCACATTAAATAAAA GGTGAGA TAA CCTCACC CTACTTGGCTAGTAT Sde_2824 3561412 - 3560963 - | cyanate hydratase Sde_2825 3563206 - 3561482 - | serine/threonine protein kinase Sde_2826 3564097 - 3563288 - | formate/nitrate transporter TERM 3869 3564588 - 3564608 + r 73 -8.2 -3.64609 | opp_overlap 3564588 TTATCCATAAAAAAA GGCGAGCC CATAA GACTCGCC TTTAAAGTAGTTATA TERM 3870 3564608 - 3564588 - R 100 -11.1 -5.64274 | opp_overlap 3564588 TTATCCATAAAAAAA GGCGAGCCC ATA AGACTCGCC TTTAAAGTAGTTATA Sde_2827 3566656 - 3564704 - | arabinogalactan endo-1,4-beta-galactosidase TERM 3871 3566924 - 3566911 - R 70 -5.3 -4.49132 | TTAAACAGAAAATAA GGTAA ACGA TTACC CATTGAGTTATAAAA Sde_2828 3568595 - 3567099 - | tryptophan halogenase TERM 3872 3568537 - 3568523 - G 75 -11.4 -2.95884 | CGAGTAACTTAGATA TGGCCG CTG CGGCCA TCCAACCTGCTGTGC Sde_2829 3569694 - 3568624 - | Pass1-related protein TERM 3873 3568853 - 3568830 - G 80 -12.6 -3.08679 | overlap 3568832 3568852 GCGCGTGATGCAATA CATTTATGGG TGGC CCCATAAATG CGGGCGTCTCTCGCC TERM 3874 3569483 - 3569464 - G 86 -9.4 -4.386 | opp_overlap 3569464 3569463 CAACCCCTGATAAAA CTGTTGAA TATA TTCAACAG CTTGTGCGTTAGATT TERM 3875 3569748 - 3569761 + r 82 -3.1 -5.4492 | gap 1 TTTGCTATTTAGCAG CCG-CT AAG AGTCGG TTTTTTCTATCTATA Sde_2830 3570465 - 3569737 - | SapC related protein TERM 3876 3570661 - 3570644 - R 100 -8.4 -5.84432 | opp_overlap 3570644 TAGAACATAAAAAAA GCCGCT AAATTA AGCGGC TTGTATGGGTTACCA TERM 3877 3570644 - 3570661 + r 71 -8.4 -3.551 | opp_overlap 3570644 TAGAACATAAAAAAA GCCGCT AAATTA AGCGGC TTGTATGGGTTACCA Sde_2831 3573758 - 3570705 - | TonB-dependent receptor TERM 3878 3572005 - 3572016 + g 72 -5.8 -4.41716 | CCGCACGGTCCCCCA CCCT TAGA AGGG TTTGTTGTGTGGTCT TERM 3879 3572989 - 3572966 - G 71 -9.6 -3.21705 | overlap 3572956 3572961 CAGAAGGGAATCCAA TAGCTGTTGG ATCG CCAACCGCTA TCGCACCACTATCTC TERM 3880 3573169 - 3573152 - G 78 -5.5 -4.7871 | overlap 3573153 AAGTATTACTAAAAA TGCCTGA TATT TCAGGCG TTACAGATGCCCCAT TERM 3881 3573168 - 3573153 - G 70 -9 -3.46141 | overlap 3573152 AGTATTACTAAAAAT GCCTGA TATT TCAGGC GTTACAGATGCCCCA TERM 3882 3573770 - 3573784 + r 84 -3.6 -5.4477 | ACATTTTTTGTCCCC TAATTG GAG CGATTA TTTTTTTAAACGTTT TERM 3883 3573857 - 3573830 - R 76 -11.2 -2.55392 | opp_overlap 3573817 3573831, overlap 3573826 3573817 AACGCATTCAAGGTA TGCCCGCCGC TTAAGTGT GCGGCGGGCT ATGTTAAGCGTTAGT TERM 3884 3573831 - 3573856 + r 100 -14.7 -3.08867 | opp_overlap 3573830 3573826 3573817, overlap 3573817 ACGCATTCAAGGTAT GCCCGCCGC TTAAGTGT GCGGCGGGC TATGTTAAGCGTTAG Sde_2832 3576501 - 3573868 - | hypothetical protein TERM 3885 3576570 - 3576553 - R 78 -9.9 -3.55444 | opp_overlap 3576533 TGGGCATGCCTGAAA CGTTGCT TCGC AGCAACG CGAGCGACAAACACG TERM 3886 3576973 - 3576993 + r 100 -12.5 -4.66953 | opp_overlap 3576973 AACGGAACCAAAAAA GCCGAGCGG TGA CCACTCGGC TTTTTGAAATCTTAG TERM 3887 3576993 - 3576973 - R 100 -14.7 -5.29385 | opp_overlap 3576973 AACGGAACCAAAAAA GCCGAGCGG TGA CCACTCGGC TTTTTGAAATCTTAG Sde_2833 3578389 - 3577049 - | hypothetical protein TERM 3888 3577125 - 3577138 + g 72 -3.1 -5.04597 | opp_overlap 3577124, overlap 3577126 GCCGGGTCGCCAAAG GCTTT TCTA AAGGC TTTTTCTCTATACAT TERM 3889 3577252 - 3577236 - G 73 -2.2 -5.24129 | overlap 3577237 TGCTCGTATAAAAAA CGTACC AAATA GGTACC CATTATGTAGAGCAC TERM 3890 3578220 - 3578232 + g 85 -3.4 -5.46629 | opp_overlap 3578220 TCTAATACCAACATA CCTA GGTCG TAGG TTTTTTTAGCGTATT TERM 3891 3578653 - 3578624 - R 86 -9.9 -3.99062 | overlap 3578625 AATAGTGACCACAAA GGGGCGTGCACCC CGCG AGGTGCACGCCAT AACAACCAAGCTTAA TERM 3892 3578652 - 3578625 - R 100 -13.4 -2.98714 | overlap 3578624 ATAGTGACCACAAAG GGGCGTGCACCC CGCG AGGTGCACGCCA TAACAACCAAGCTTA Sde_2834 3582381 - 3578665 - | glycosyl hydrolase-like TERM 3893 3580671 - 3580688 + g 70 -9.9 -3.09556 | overlap 3580670 CTACCGAGCGCGCTA TTGCCGA TAAC TCGGCAA CTTTATTAAACGCTT TERM 3894 3582361 - 3582340 - G 80 -7.3 -4.70921 | overlap 3582341 GATAAGAGAAACAAA CGCCACAAT GTAA ATTGCGGCA CGTATCAGTCGCAGT Sde_2835 3582947 - 3583987 + | response regulator receiver domain-containing protein TERM 3895 3584083 - 3584060 - T 100 -16 -4.55093 | opp_overlap 3584053 3584072 CCACACAACAATAAA GCGCAGGCAC TTTC GCGCCTGCGC CGCCATTGTTATATA TERM 3896 3584087 - 3584118 + T 75 -3 -5.14563 | overlap 3584072 3584053 TCGCGCCTGCGCCGC CATTGTTATATAGC TATA GCTATGCAGCCATG TTTTTTAGTGCACAC Sde_2836 3584716 - 3584123 - | heat shock protein Hsp20 TERM 3897 3584825 - 3584802 - R 100 -13.8 -3.08813 | opp_overlap 3584822 CGCTATTCGAACATA GGGGCCGCAG CAAG CCACGGCCCC CTTGCGGTTATGCAG Sde_2837 3585315 - 3584833 - | molecular chaperone (small heat shock protein) TERM 3898 3585044 - 3585020 - G 75 -6.5 -4.4261 | gap 1 TCCGCAAGATTAAAA TTGCGC-TCG AATGCA CGATGCGCAA TGCCCTGATGGAGAT Sde_2838 3586149 - 3585592 - | putative lipoprotein TERM 3899 3586284 - 3586265 - R 100 -12.1 -5.75342 | opp_overlap 3586265, overlap 3586250 CCGCCCCAAAAAAAA GCCCCGC TTTAAG GCGGGGC TTTAAAAATAGATAA TERM 3900 3586265 - 3586284 + r 100 -12.8 -3.57792 | opp_overlap 3586250 3586265 CCGCCCCAAAAAAAA GCCCCGCT TTAA GGCGGGGC TTTAAAAATAGATAA Sde_2839 3587415 - 3586312 - | Poly(beta-D-mannuronate) lyase TERM 3901 3586364 - 3586378 + g 73 -2.1 -5.21236 | gap 1 TTTGTAAATGTTACG CGTGTG TAGT CAC-CG TTTTTCTTGTCGGTT TERM 3902 3587383 - 3587393 + g 75 -3.2 -5.10765 | overlap 3587386 GGCCACAAGGCCTAA GCTT AAA AGGC TTTTATTCTTTATTT TERM 3903 3587578 - 3587603 + r 100 -16.3 -2.64616 | opp_overlap 3587578 3587597 ACAGCCTTTTATATA CCCTGAATTGG TTAA CCAATTCAGGG TGGTCTGAATAAAGA TERM 3904 3587603 - 3587578 - R 100 -16.3 -2.87683 | opp_overlap 3587578, overlap 3587597 ACAGCCTTTTATATA CCCTGAATTGG TTAA CCAATTCAGGG TGGTCTGAATAAAGA Sde_2840 3588655 - 3587693 - | parallel beta-helix repeat-containing protein TERM 3905 3588062 - 3588074 + g 71 -3.4 -4.86731 | ATCTGGGCTCGCAAT TAGC CAGTC GCTA TTTTCTTTACGCAGC Sde_2841 3591599 - 3588666 - | ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like TERM 3906 3590811 - 3590780 - G 74 -11 -2.79327 | gap 1, opp_overlap 3590783, overlap 3590779 3590783 CTAGCGCATTTAAAG CAAGCAATGCGGTGG CGG CCACC-CACTGCTTA TGACGCGGTTTAACC TERM 3907 3590808 - 3590783 - G 79 -10.5 -3.54408 | gap 1, opp_overlap 3590783, overlap 3590780 3590779 GCGCATTTAAAGCAA GCAATGCGGTGG CGG CCACC-CACTGC TTATGACGCGGTTTA TERM 3908 3591286 - 3591274 - G 78 -5.5 -4.79352 | TTACCTACAACAAAA TGCCA TAA CGGCA CGGCTTGAGTAAGTA TERM 3909 3591379 - 3591369 - G 76 -4 -4.96848 | GGTTGCACACAAAAA TACT AAC AGTA GCGGCATCCATTCAA Sde_2842 3592542 - 3591589 - | ATP-binding protein of ABC transporter TERM 3910 3591866 - 3591885 + g 70 -5 -4.4267 | overlap 3591867 GGCAACGACGTATGT AGCAGTAA TGAG TTACTGCG TTTTAGATTTTCGAG TERM 3911 3592197 - 3592213 + g 83 -2.2 -5.63517 | opp_overlap 3592197 CGGTAGCTTGTATAA CGCG TTTTATCTC CGCG TTTTTTATTTCACCC TERM 3912 3592845 - 3592873 + r 100 -19.1 -3.62478 | opp_overlap 3592854 ACGGGAGTTTTGAGA CGCTAATCACTAG CAA CTAGTGATTAGCG TTTAGCGCTTAATTA Sde_2843 3595723 - 3592886 - | extracellular nuclease-like TERM 3913 3595191 - 3595163 - G 93 -11.7 -3.72576 | opp_overlap 3595155 3595158 3595157, overlap 3595179 GCTGCCCGTAGCAAA CTGCTGCATTGGC AAA GGCACTGCAGCAG TGGCATTAGTTGTTT TERM 3914 3595882 - 3595913 + r 71 -8.7 -3.24021 | opp_overlap 3595885, overlap 3595885 AACGAAGTTCAAACA AAATCGCCCAGCA ACAAAG TGCTGGGCGATAA TTAAGTATTTCAAAA TERM 3915 3595885 - 3595910 + r 100 -14.8 -2.80438 | opp_overlap 3595885, overlap 3595882 GAAGTTCAAACAAAA TCGCCCAGCA ACAAAG TGCTGGGCGA TAATTAAGTATTTCA TERM 3916 3595910 - 3595885 - R 100 -14.8 -4.90525 | opp_overlap 3595885 3595882 GAAGTTCAAACAAAA TCGCCCAGCA ACAAAG TGCTGGGCGA TAATTAAGTATTTCA Sde_2844 3597945 - 3595987 - | hypothetical protein TERM 3917 3596774 - 3596754 - G 71 -7.5 -3.86194 | overlap 3596755 3596769 AACCTCGGGTAGAAA CCGCCGC GCCAACT ACGGCGG CGCCATTGGCGTCTT Sde_2845 3598879 - 3598247 - | hypothetical protein TERM 3918 3599182 - 3599171 - g 80 -7.2 -4.6709 | overlap 3599172 CAAAACGAGATAAAA CGCC CTAT GGCG CCATCCTTTTATCGT Sde_2846 3599129 - 3600742 + | ABC-type molybdate transport system permease component-like TERM 3919 3601184 - 3601169 - g 74 -5.4 -4.56597 | TCTGGCGGCGAAAAA CAACGG GTAG CCATTG CGCGTGCGCTGCTTA TERM 3920 3601447 - 3601431 - g 73 -7.9 -4.1399 | opp_overlap 3601437 TTACTGATACACAAA GCCCCAC CGC GCAGGGC GAAGACACCTGCGTA Sde_2847 3600746 - 3601834 + | Fis family transcriptional regulator TERM 3921 3602391 - 3602370 - g 79 -2.9 -5.27938 | overlap 3602372 3602375 ATTTTTAAACAAAAA CACAGCGCT TAAT AGCGATGCA GAAATTCCATTTTTA Sde_2848 3602041 - 3602694 + | histidine kinase Sde_2849 3603595 - 3602717 - | hypothetical protein Sde_2850 3604711 - 3603785 - | putative lipase/esterase TERM 3922 3604884 - 3604855 - H 70 -2.9 -4.96427 | gap 1 CAATAACAAAATAAA GGCTA-GCCACT ACAGTAA AGCGGCATAACC CAGAGGCACACAATG TERM 3923 3605651 - 3605664 + G 83 -4.5 -5.27335 | gap 1, opp_overlap 3605649 3605651 TCGCGCGCGACAAGA GCACCG CAC CGG-GC TTTTTCTTTAGAGCC Sde_2851 3604897 - 3606312 + | hypothetical protein TERM 3924 3606843 - 3606866 + G 79 -11.6 -3.14229 | overlap 3606854 TCTACGCCTATTTCT TTGCGCGGCG AGAT CGCCGCGCGC TCTTGGTACCCCTCT Sde_2852 3606336 - 3607484 + | hypothetical protein TERM 3925 3607510 - 3607566 + T 76 -11.2 -2.51966 | opp_overlap 3607533 3607540 3607547, overlap 3607509 TCGCCAGTATCTAGC CGCTAATTGCTAGCGACTAGATA-CTAG ATA CTAGATA-CTAGATACTAGCGATTAGCG ATTACTAAACTTTAA Sde_2853 3609829 - 3607571 - | isoquinoline 1-oxidoreductase, beta subunit, putative TERM 3926 3609250 - 3609280 + g 72 -6.2 -4.26792 | overlap 3609256 GGGCTACGTCTTTAC CTATAAGCGAGAAA TCT TTGTTCGCTTTTAG TTTTACGCTTTCTCT Sde_2854 3610296 - 3609829 - | putative oxidoreductase Sde_2855 3610554 - 3610949 + | helix-turn-helix, AraC type Sde_2856 3611086 - 3612708 + | response regulator receiver domain-containing protein TERM 3927 3613062 - 3613041 - g 74 -5.9 -4.67048 | gap 1 TCAGTGGAAAATAAA TTGGTGCGAA AAG CTCGC-CCAA AAAGACACGCGCTTA Sde_2857 3612913 - 3616539 + | hypothetical protein TERM 3928 3616552 - 3616540 - T 73 -9.1 -3.48064 | opp_overlap 3616533 CTTATAAGTAATTAA GTGCG TGA CGCAC TAAAGGATATATACG TERM 3929 3616576 - 3616597 + T 100 -14.5 -3.83318 | opp_overlap 3616578 ATATACGCTGTACTA GAGCCAACC TAAA GGTTGGCTC TTCTATTCTTAACAC TERM 3930 3616595 - 3616578 - T 81 -11.3 -2.78935 | opp_overlap 3616576 ATACGCTGTACTAGA GCCAACC TAAA GGTTGGC TCTTCTATTCTTAAC Sde_2858 3617243 - 3616638 - | phosphatidylserine synthase-like Sde_2859 3618016 - 3617315 - | hypothetical protein Sde_2860 3621270 - 3618070 - | hypothetical protein TERM 3931 3621567 - 3621532 - R 73 -5.4 -4.58236 | overlap 3621534 3621535 TAGAAAACACTAAAA CACCAAGGCCAACC ACATGCAG GGCTGGCCTCGATC AGATTTATTACTGCA TERM 3932 3621565 - 3621534 - R 72 -8 -3.87543 | overlap 3621532 3621535 GAAAACACTAAAACA CCAAGGCCAACC ACATGCAG GGCTGGCCTCGA TCAGATTTATTACTG TERM 3933 3621564 - 3621535 - R 71 -9.3 -2.90899 | overlap 3621534 3621532 AAAACACTAAAACAC CAAGGCCAACC ACATGCAG GGCTGGCCTCG ATCAGATTTATTACT Sde_2861 3622500 - 3621607 - | P3 protein TERM 3934 3621917 - 3621927 + g 90 -6.8 -5.27938 | opp_overlap 3621917 GTAGAAAACATAGCA GCGA TAG TCGC TTTTTCTTTAACGAT Sde_2862 3622821 - 3623225 + | hypothetical protein Sde_2863 3623215 - 3623445 + | GGDEF Sde_2864 3623442 - 3623864 + | hypothetical protein Sde_2865 3625864 - 3624248 - | Elongator protein 3/MiaB/NifB TERM 3935 3624384 - 3624370 - G 70 -9.2 -3.31144 | opp_overlap 3624377, overlap 3624371 CTGTTAGGTGCACAA CGGCCG CTG CGGCCA CCACATTCATCACGC TERM 3936 3624383 - 3624371 - G 71 -10.5 -2.58544 | opp_overlap 3624377, overlap 3624370 TGTTAGGTGCACAAC GGCCG CTG CGGCC ACCACATTCATCACG TERM 3937 3625596 - 3625586 - G 70 -2.4 -5.07567 | opp_overlap 3625586 TGAGATGCCAAAAAA GCCG CTT CGGA TGCTATCTAATGCTC TERM 3938 3625696 - 3625707 + g 74 -5.8 -4.70515 | CCCAACCCTCGAGGG TGGC AGCG GCCA TTTGTTTTAGGTGTA TERM 3939 3626244 - 3626258 + G 74 -7 -4.35461 | TGTAAAGCTGCTTGC CCTGCG ATG CGCCGG TTTTAATAATGTTGA Sde_2866 3626029 - 3627018 + | D-lactate dehydrogenase Sde_2867 3628453 - 3627530 - | glutaminase TERM 3940 3627617 - 3627597 - G 70 -9.6 -2.94293 | overlap 3627594 GCCTTAACAGAATTA CCCGAGGC GTTAA GCCGCGGG CTAAACACCGCGATG Sde_2868 3629568 - 3628639 - | cysteine synthase A TERM 3941 3629050 - 3629032 - G 71 -7.4 -3.91196 | overlap 3629043 GCTATAGAGACCAAA TAGCCCAC CAA GCGAGCTA CCCACCAGCCCTCTA Sde_2869 3631392 - 3629686 - | hypothetical protein TERM 3942 3629988 - 3630004 + g 71 -3.7 -4.81249 | overlap 3629964 CCTTTTCGAAAAGGG CTATGGA CGC TTCGTAG TTTTTCGCTTTGCCC TERM 3943 3631360 - 3631346 - G 84 -4.9 -5.37593 | GCGCAAATCAAAAAA GACGC AAACA GCGCC CGCACACGTTTAATT Sde_2870 3631790 - 3633067 + | putative transcriptional regulator, CadC Sde_2871 3633089 - 3633745 + | hypothetical protein TERM 3944 3633886 - 3633861 - T 75 -7.5 -4.33004 | opp_overlap 3633863, overlap 3633858 3633863 ATGCAATTAAAAGAA TAGCCCGCAGT AAAC ACCACGGGCTT CGCTATTTAATTAGT TERM 3945 3633884 - 3633863 - T 84 -10.1 -3.75762 | opp_overlap 3633863, overlap 3633861 3633858 GCAATTAAAAGAATA GCCCGCAGT AAAC ACCACGGGC TTCGCTATTTAATTA Sde_2872 3636530 - 3633897 - | hypothetical protein TERM 3946 3636873 - 3636850 - R 100 -12.4 -5.77632 | opp_overlap 3636850 AAAAGCATAAAAAAA CCCGCACAAG CTAG CCTGCGCGGG TTTTGGGTTGGCGCT TERM 3947 3636850 - 3636873 + r 79 -8 -4.27584 | opp_overlap 3636850 AAAAGCATAAAAAAA CCCGCACAAG CTAG CCTGCGCGGG TTTTGGGTTGGCGCT Sde_2873 3641583 - 3636919 - | Poly(beta-D-mannuronate) lyase TERM 3948 3637569 - 3637532 - G 70 -8.8 -3.40403 | gap 1, opp_overlap 3637539 3637543, overlap 3637539 CTGTCGGTACCAGAA GGT-AAAATAACGTTGT AGCTA ACAACATTATTTTGACC GCTTTCTAACGCGAG Sde_2874 3642383 - 3642198 - | hypothetical protein TERM 3949 3642331 - 3642347 + g 81 -8.1 -4.45544 | opp_overlap 3642330 CCATCTTCAATTGAG GTGAATT TAT AATTCAC TTTTACTTGCTCCAA Sde_2875 3643436 - 3642567 - | LysR family transcriptional regulator TERM 3950 3643486 - 3643462 - H 86 -8.1 -4.73614 | opp_overlap 3643462 CATCATTAAAATAAA TTATCATTTAT ATA ACAAATGATAA TTTTACCTAATCAAA TERM 3951 3643933 - 3643915 - g 70 -2.2 -5.02074 | opp_overlap 3643916, overlap 3643916 GCAGGGGGCAAAAAA CGCATGGC CAA GCCGCGCT ACTATTACCCAGGCA Sde_2876 3643480 - 3644049 + | extracellular solute-binding protein TERM 3952 3644165 - 3644186 + T 100 -10.1 -4.60041 | opp_overlap 3644165 ACAGGCATAAAAAAA GCGAGCCCA TTAC TGAGCTCGC TTTTTAACGATCAAT TERM 3953 3644186 - 3644165 - T 100 -12.3 -5.65177 | opp_overlap 3644165 ACAGGCATAAAAAAA GCGAGCCCA TTAC TGAGCTCGC TTTTTAACGATCAAT Sde_2877 3644923 - 3644213 - | hypothetical protein TERM 3954 3647074 - 3647064 - g 71 -6.8 -4.18197 | AGCTTCGATGCAAAA GCAG TTG CTGC GCGTAATATTCAGAT Sde_2878 3645279 - 3648185 + | histidine kinase TERM 3955 3648250 - 3648215 - T 100 -14.8 -3.40511 | opp_overlap 3648220, overlap 3648220 CAGCTAACAGAAAAG CAAAAGGGCTTGGCGG TTTA CCGTCAAGCCCTTTTT TTGGCGATAACAGTT TERM 3956 3648245 - 3648220 - T 100 -14.7 -4.76874 | opp_overlap 3648220, overlap 3648215 AACAGAAAAGCAAAA GGGCTTGGCGG TTTA CCGTCAAGCCC TTTTTTTGGCGATAA TERM 3957 3648220 - 3648245 + T 100 -16.9 -5.42259 | opp_overlap 3648220 3648215 AACAGAAAAGCAAAA GGGCTTGGCGG TTTA CCGTCAAGCCC TTTTTTTGGCGATAA Sde_2879 3649121 - 3648276 - | hypothetical protein TERM 3958 3648978 - 3648988 + g 76 -2.4 -5.38047 | opp_overlap 3648973 GTGAGTAAACTCACC GCCG CGA CCGC TTTTTTCTATAGCTA Sde_2880 3649857 - 3649321 - | response regulator receiver protein Sde_2881 3651164 - 3649854 - | putative two-component sensor Sde_2882 3651394 - 3653736 + | TonB-dependent receptor protein TERM 3959 3653844 - 3653865 + G 100 -12.3 -5.48063 | TATCGTACGCTTTGG CGCTGGCAT TTTT ATGCCGGCG TTTTTTGTATTCCAT Sde_2883 3653811 - 3655163 + | hypothetical protein TERM 3960 3655166 - 3655183 + T 71 -6.9 -4.11216 | GCTGGGTATTTAGCG CGCGGGT TTAC GCCTGCG TTTTAAAGCTAGCCA Sde_2884 3656275 - 3655160 - | hypothetical protein TERM 3961 3656349 - 3656313 - R 100 -19 -4.81249 | gap 1, opp_overlap 3656306 GTCTAAACGCAAAAA GGCTTTGGTGGATGTAG TTAA CTAC-TCCACCAAAGCC TGTAACACTTGCATA Sde_2885 3658488 - 3656374 - | histidine kinase TERM 3962 3659646 - 3659634 - g 73 -4.1 -4.82154 | AAGCCAGAGTAAAAA TAGCC GGC GACTA CAAGCGCTTCACGGT Sde_2886 3658784 - 3659884 + | putative phenylacetic acid degradation NADH oxidoreductase TERM 3963 3659945 - 3659919 - f 71 -3 -4.97158 | CCAGATTAAATAAAA CCGAATAAGT AAACCCA ACCAATTCGG ATATTTTTTTATTAC TERM 3964 3660740 - 3660752 + G 72 -4.8 -4.63044 | CACTATAAAGGTTAA CCCA CTACT TGGG TTTCTTTATATGAAT TERM 3965 3660905 - 3660895 - g 72 -5.4 -4.55295 | CGGTGTACAAAGAAA TGCT ACC AGCA CTGCGCAAACAAGCC Sde_2887 3659982 - 3661409 + | prolyl 4-hydroxylase, alpha subunit Sde_2888 3662402 - 3661542 - | AraC family transcriptional regulator Sde_2889 3662690 - 3663796 + | histidine kinase TERM 3966 3664571 - 3664587 + G 75 -3 -5.16237 | gap 1, opp_overlap 3664565 3664569 3664567 ACTGGAACACACAGC TTGC-GC ACAC GCTGCAA TTTTTTAATCGAATT Sde_2890 3663811 - 3664635 + | ATPase TERM 3967 3664695 - 3664672 - T 72 -7.4 -3.94724 | opp_overlap 3664672 CAAATTACAGAAGAA TGGCCAGCAA TCAC CTGCCAGCCA TTTTCACTACGCGCT Sde_2891 3665141 - 3664653 - | hypothetical protein Sde_2892 3666090 - 3665152 - | hypothetical protein TERM 3968 3665784 - 3665766 - G 77 -3.8 -5.18726 | GGTGCATAACAAAAA TTTGCACC GTA GATGCCAA CTCACCCTTGGGCTG Sde_2893 3667791 - 3666100 - | hypothetical protein TERM 3969 3666526 - 3666576 + g 78 -5.6 -4.88067 | gap 2, overlap 3666529 3666530 ATCCCACTCGACATC TGCTGGGTTTACCACTGTGTTCTC ACCCA GCGCATACAG-GGTAAACCC-GTA TTTTTCTAGGTAGCT TERM 3970 3666529 - 3666574 + g 76 -8.4 -4.06182 | gap 1, overlap 3666526 3666530 CCACTCGACATCTGC TGGGTTTACCACTGTGTTCTC ACCCA GCGCATACAG-GGTAAACCCG TATTTTTCTAGGTAG TERM 3971 3666530 - 3666573 + g 70 -9.7 -3.02986 | gap 1, overlap 3666529 3666526 CACTCGACATCTGCT GGGTTTACCACTGTGTTCTC ACCCA GCGCATACAG-GGTAAACCC GTATTTTTCTAGGTA TERM 3972 3669488 - 3669512 + G 85 -7 -4.93877 | opp_overlap 3669488 3669487, overlap 3669490 ACCCGCACTAGTAAC GCGCGTTGGC GTAAA GCCACCGCAC TTTTGTTTGGTGCAC TERM 3973 3670436 - 3670456 + G 82 -7.5 -4.62336 | overlap 3670437 3670439 TCCGTAGCTGCGGTA TGCCAGCGA TTA TCGCTGTCG TTTTTACAATCGCGT TERM 3974 3670437 - 3670455 + G 70 -8.8 -3.3692 | overlap 3670436 3670439 CCGTAGCTGCGGTAT GCCAGCGA TTA TCGCTGTC GTTTTTACAATCGCG TERM 3975 3670439 - 3670453 + G 71 -10 -3.25166 | overlap 3670437 3670436 GTAGCTGCGGTATGC CAGCGA TTA TCGCTG TCGTTTTTACAATCG Sde_2894 3668186 - 3671275 + | cellulose binding, type IV Sde_2895 3671272 - 3672066 + | helix-turn-helix, AraC type TERM 3976 3672076 - 3672098 + F 86 -10.6 -3.89822 | opp_overlap 3672075 3672073 3672076 TACTAAGCCAAATAG CCATGCGG CCAAGTA CCGCATGG TTTCTCCACTAACTA TERM 3977 3672098 - 3672076 - f 80 -11.3 -2.68034 | opp_overlap 3672076, overlap 3672075 3672073 TACTAAGCCAAATAG CCATGCGGC CAAGT ACCGCATGG TTTCTCCACTAACTA TERM 3978 3673513 - 3673497 - g 70 -5.1 -4.55295 | overlap 3673493 GCGGGCAGAAATAAA GTTGTAG TCT CTTCAAC CTTAGCGAACCTGCC Sde_2896 3672207 - 3673538 + | cellulose binding, type IV TERM 3979 3673587 - 3673607 + T 77 -10.5 -3.15758 | opp_overlap 3673587, overlap 3673576 CTGCAGCGTTATTAA TAGGGGAAT CTA GTTCCCCTA TTAATGGAGGGTTAT TERM 3980 3673607 - 3673587 - T 74 -9.8 -3.15544 | opp_overlap 3673576 3673587 CTGCAGCGTTATTAA TAGGGGAA TCTAG TTCCCCTA TTAATGGAGGGTTAT Sde_2897 3674027 - 3673665 - | hypothetical protein Sde_2898 3676275 - 3674101 - | radical SAM family protein Sde_2899 3676523 - 3676738 + | hypothetical protein TERM 3981 3677410 - 3677441 + G 74 -8.7 -3.85878 | overlap 3677400 3677411 TCGAGGGCCAGGTTC TGCCCTGTATGGC TCCAAT GCCATGCAAGGCG TTATTAATATTGTTA TERM 3982 3678152 - 3678138 - g 72 -5.6 -4.44448 | ACTACGGCAAACAAA CCGACG GCC CGCCAG CACAGCATGCATCCA TERM 3983 3678590 - 3678570 - g 76 -8.9 -3.7948 | TCAACATGGACCAAA GCCCTGTGC GCG GCGCAGAGC TCGAACTAGCGCTAC TERM 3984 3678677 - 3678696 + G 72 -8.6 -3.79251 | overlap 3678680 GAAACCTCTTACCGC GAAGCTAG CCGT CTGGCTTC TTTAATGGTGAGCTA Sde_2900 3676928 - 3678988 + | Outer membrane receptor for ferrienterochelin and colicins-like Sde_2901 3679140 - 3680093 + | cysteine synthase TERM 3985 3680097 - 3680129 + T 100 -11.9 -3.87075 | opp_overlap 3680096 3680097, overlap 3680083 3680098 AGCCAGCAGTAATAC CTTTTGCCGCGGGCG TTT CGCTCGCGGCGCAAC TTTCTAGGCGCTAAT TERM 3986 3680098 - 3680128 + T 100 -15.4 -2.91924 | opp_overlap 3680097 3680096, overlap 3680083 3680097 GCCAGCAGTAATACC TTTTGCCGCGGGCG TTT CGCTCGCGGCGCAA CTTTCTAGGCGCTAA Sde_2902 3681434 - 3680502 - | hypothetical protein TERM 3987 3681002 - 3681018 + g 75 -2.9 -5.25699 | overlap 3681005 ATATAAAATCTGTAC GAATTGC ACC GCGAATC TTTTTCTTCTCTAAT Sde_2903 3682455 - 3681760 - | hypothetical protein Sde_2904 3683133 - 3682804 - | hypothetical protein Sde_2905 3683709 - 3683152 - | alpha amylase domain-containing protein Sde_2906 3684298 - 3683843 - | cellulose-binding family II protein TERM 3988 3684346 - 3684382 + r 100 -14.8 -2.64912 | gap 1, opp_overlap 3684349 3684351, overlap 3684349 3684350 3684351 GTAAACCGAGTGTAA TAATA-GTTTAGCCGTC TGTC GACGGCTAAACATATTA ATTATACGTTCGAGG TERM 3989 3684349 - 3684379 + r 91 -12.1 -3.47403 | gap 1, opp_overlap 3684349 3684351, overlap 3684346 3684350 3684351 AACCGAGTGTAATAA TA-GTTTAGCCGTC TGTC GACGGCTAAACATA TTAATTATACGTTCG TERM 3990 3684379 - 3684349 - R 93 -12.1 -3.6579 | gap 1, opp_overlap 3684349 3684346 3684350 3684351, overlap 3684351 AACCGAGTGTAATAA TA-GTTTAGCCGTC TGTC GACGGCTAAACATA TTAATTATACGTTCG TERM 3991 3684350 - 3684377 + r 100 -12.8 -3.30441 | opp_overlap 3684349 3684351, overlap 3684349 3684346 3684351 ACCGAGTGTAATAAT AGTTTAGCCGTC TGTC GACGGCTAAACA TATTAATTATACGTT TERM 3992 3684376 - 3684351 - R 100 -16.3 -3.40611 | opp_overlap 3684350 3684349 3684346 3684351, overlap 3684349 CCGAGTGTAATAATA GTTTAGCCGTC TGTC GACGGCTAAAC ATATTAATTATACGT TERM 3993 3684351 - 3684376 + r 100 -16.3 -2.57541 | opp_overlap 3684351 3684349, overlap 3684350 3684349 3684346 CCGAGTGTAATAATA GTTTAGCCGTC TGTC GACGGCTAAAC ATATTAATTATACGT Sde_2907 3686902 - 3684473 - | hypothetical protein TERM 3994 3685837 - 3685827 - G 73 -4.6 -4.82901 | TTCTTTGCACAAAAA GCAC TGT GCGC CAAATTCATATCTTG Sde_2908 3688221 - 3686914 - | Na+/H+-dicarboxylate symporters-like TERM 3995 3687997 - 3687969 - G 73 -4 -4.83615 | opp_overlap 3687972 3687989, overlap 3687989 TACCGCCTACAAAAA CAATGCCTAT TCGCATTAC ATAGGCATTA CCTATTTTGCGAATA Sde_2909 3689245 - 3688214 - | amino acid ABC transporter periplasmic protein TERM 3996 3688978 - 3688968 - G 73 -2.4 -5.15634 | GATTTCACTAAAAAA GGTG CCA CCCC GATTACACCAGCAGA TERM 3997 3689067 - 3689083 + g 72 -9.3 -3.53012 | ATTCTAGCCATTGCC GGCGCGC GCA GCCCGCC TTTAGCCGCAGCGGC Sde_2910 3692145 - 3689245 - | hypothetical protein Sde_2911 3694423 - 3692579 - | Signal transduction histidine kinase-like Sde_2912 3695791 - 3694520 - | signal peptide prediction TERM 3998 3695673 - 3695685 + g 81 -3.3 -5.41143 | TGGGTACCTAAAACC CGCAA AGT TGGCG TTTTTTTCGCGAATA TERM 3999 3696489 - 3696528 + G 71 -7.8 -3.92625 | opp_overlap 3696490, overlap 3696490 GCCCATACTTAGATT ACCGCCAACTGTCCAATG CGCG CATTGAACAGCTGGCGAA TTTAGTTAAGCTGTG TERM 4000 3696527 - 3696490 - g 100 -17.9 -2.65815 | opp_overlap 3696490 3696489 CCCATACTTAGATTA CCGCCAACTGTCCAATG CGCG CATTGAACAGCTGGCGA ATTTAGTTAAGCTGT TERM 4001 3696490 - 3696527 + G 75 -11.3 -2.95093 | opp_overlap 3696490, overlap 3696489 CCCATACTTAGATTA CCGCCAACTGTCCAATG CGCG CATTGAACAGCTGGCGA ATTTAGTTAAGCTGT Sde_2913 3696020 - 3696556 + | parallel beta-helix repeat-containing protein Sde_2914 3697683 - 3696562 - | pectic acid lyase TERM 4002 3696996 - 3696973 - G 72 -6.6 -4.24342 | TTGCGTATTAACAAA CGCCGTTGCT TGAT ACCCACGGCG CTGCGCCGCCAATGC Sde_2915 3699147 - 3697687 - | glutathione synthase TERM 4003 3698027 - 3698009 - G 72 -10.4 -2.8474 | opp_overlap 3698013, overlap 3698013 TGGTACCTACAAGCA TAAATGGC TCG GCCATTTA ATACGCCTATACGCC TERM 4004 3698023 - 3698013 - G 71 -6.8 -4.10612 | opp_overlap 3698013, overlap 3698009 ACCTACAAGCATAAA TGGC TCG GCCA TTTAATACGCCTATA TERM 4005 3698571 - 3698582 + g 78 -5.8 -4.78237 | opp_overlap 3698571 3698570 CCAATATGGCCAAAT CCCA ACGC TGGG TTTTCTTGTGCGCTG Sde_2916 3700279 - 3699140 - | hypothetical protein TERM 4006 3700169 - 3700155 - G 86 -4.2 -5.62219 | overlap 3700158 AATACACGAAAAAAA GAATGC TCA GCACCC ACTACGCTAGGGCTG TERM 4007 3700188 - 3700158 - G 73 -4 -4.86226 | gap 1, overlap 3700155 ACACGAAAAAAAGAA TGCTCAGCACCCA CTACGC TAGG-GCTGCGCA CGAGAATAGAAAGCA TERM 4008 3701013 - 3701029 + G 75 -9.5 -3.55761 | GCAATAAAGAGCGCG TGCCAAA CTC TTTGGCA TTTACCGCCTCGATG Sde_2917 3700631 - 3701374 + | hypothetical protein Sde_2918 3703708 - 3701369 - | Cache sensor hybrid histidine kinase TERM 4009 3704077 - 3704099 + G 75 -11.3 -3.02511 | gap 1, opp_overlap 3704074 TGTATAGATAGATCG GCCGCCT-GC AAGC GCGAGGCGGC TATTAAAAAACTGCC TERM 4010 3704120 - 3704110 - g 87 -6.8 -5.14563 | GCGGCTATTAAAAAA CTGC CCC GCAG CGCCAAAGTAGCCCT Sde_2919 3703876 - 3704196 + | endonuclease Sde_2920 3704797 - 3704150 - | oxidoreductase TERM 4011 3704412 - 3704423 + g 73 -4.4 -4.82901 | opp_overlap 3704412 GCCTCGCCTTTAAAG GCAT CCAC ATGC TTTTTATAAAAGCCC TERM 4012 3704548 - 3704562 + g 79 -11.4 -3.31792 | overlap 3704538 GCCACTCTGCTCCTG CGGCAG ATT CTGCCG TTATCCAACTAATGC TERM 4013 3704819 - 3704808 - H 73 -7.2 -4.20148 | opp_overlap 3704816 ATCACTCTAAAAGAA GGCG GAAT CGCC AAAGCCGCTATTATC Sde_2921 3704961 - 3705698 + | hypothetical protein TERM 4014 3706167 - 3706156 - g 73 -2.2 -5.2204 | gap 1, overlap 3706157 GAGAAGTAATAAAAA GC-CG CAC CGTGC TCGGGTTCCCTGAAG Sde_2922 3705831 - 3707078 + | GAF sensor signal transduction histidine kinase Sde_2923 3707219 - 3708145 + | ABC transporter, ATP-binding protein Sde_2924 3708142 - 3708903 + | putative ABC transporter inner membrane subunit TERM 4015 3708953 - 3708989 + T 100 -14 -3.1247 | opp_overlap 3708957, overlap 3708957 TTTTAATCACCAGTT TAAATCGTTAGCCG AAAACTCAC CGGCTAACGATTTA TTAACTGTCAACGGT TERM 4016 3708985 - 3708957 - T 84 -11.1 -3.6284 | opp_overlap 3708957 3708953 AATCACCAGTTTAAA TCGTTAGCCGA AAACTCA CCGGCTAACGA TTTATTAACTGTCAA TERM 4017 3708957 - 3708985 + T 91 -10.4 -4.23213 | opp_overlap 3708957, overlap 3708953 AATCACCAGTTTAAA TCGTTAGCCG AAAACTCAC CGGCTAACGA TTTATTAACTGTCAA Sde_2925 3710298 - 3709036 - | hypothetical protein TERM 4018 3709711 - 3709732 + g 73 -2.3 -5.19819 | overlap 3709714 GGGGTAGCCAAATTG CAATAAAGG CACC TCTTTAGTG TTTTTACTTTTCTTT TERM 4019 3710039 - 3710052 + g 72 -8.1 -3.77808 | overlap 3710047 ACAGGCTTTAAGCCT GCTGC CTGC GCAGC TTGTGTTGTAATAAC Sde_2926 3710585 - 3712441 + | hypothetical protein TERM 4020 3712558 - 3712541 - T 100 -12.7 -5.03994 | GCTTATATATAAAAA GCTCCCC CGAA GGGGAGC TGCTGACAAACAAAT Sde_2927 3716913 - 3712588 - | beta-1,3-glucanase precursor TERM 4021 3714027 - 3714017 - G 80 -6.8 -4.56702 | CGGTAATCAAACAAA CCGT TGT ACGG GTGACCATTGCGACG TERM 4022 3716557 - 3716539 - G 90 -10.2 -4.24404 | opp_overlap 3716542 ACCCAAAGTCCAAAA CGCTGGCC ACA GGCCATCG TCTAACTTAGGCAAT Sde_2928 3717738 - 3718910 + | AraC family transcriptional regulator TERM 4023 3719009 - 3718994 - T 100 -10.4 -5.60993 | opp_overlap 3718991 3718994 TCCCGCACAAAAAAA GCTCGC CGTA GCGAGC TCAGTTTATTGATAA TERM 4024 3718994 - 3719009 + T 75 -10.4 -2.77283 | opp_overlap 3718994, overlap 3718991 TCCCGCACAAAAAAA GCTCGC CGTA GCGAGC TCAGTTTATTGATAA TERM 4025 3719120 - 3719145 + T 100 -11.3 -4.93696 | opp_overlap 3719119 3719118 TATATCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTTCAA TERM 4026 3719212 - 3719227 + T 100 -10.4 -4.86293 | TTGTCATCAGTCTGA GCTCGC CGTA GCGAGC TTTTAATTTTTATTA Sde_2929 3721293 - 3719272 - | hypothetical protein TERM 4027 3719653 - 3719641 - G 76 -9.1 -3.73775 | GTTATCGCCACTAAA CGACC ACG GGTCG TAATGGTGAAAAGTA TERM 4028 3719772 - 3719795 + g 73 -4.6 -4.78839 | gap 1, opp_overlap 3719770 3719772 CACCAATAATAACGA TTCGCTGCG CATCTAT CGC-GCGAA TTTTGTTATAGGCTT Sde_2930 3722425 - 3721601 - | hypothetical protein TERM 4029 3721868 - 3721856 - G 77 -3.3 -5.20333 | TAGCGACAATAAAAA GTCCA GTT TGGCC AATTCACTATTCCCC TERM 4030 3722620 - 3722598 - R 100 -7.7 -5.60864 | CATACAGCAAAAAAA GGCACATTC GGGCT GAGTGTGCC GCCGGTATTGAGAAG Sde_2931 3723168 - 3722689 - | glutathione peroxidase TERM 4031 3723322 - 3723311 - H 72 -7.2 -3.98627 | GCACCAACATAATAA GGGC CAGC GCCC AGCTACACTTCCAAA Sde_2932 3723618 - 3723974 + | hypothetical protein TERM 4032 3724058 - 3724022 - f 70 -9.5 -2.80935 | ATTGCAGCCATTACA TCGGCGCCAATAGTA GACGGCA TACTACTAGCGCCGC AAAGCCCCGCGAAAA TERM 4033 3724568 - 3724548 - g 85 -6.9 -4.97405 | ATTCACAAAAACAAA TACTGGCGA GCT TCACCAATA GCAATATTGCCGTAT Sde_2933 3724079 - 3724705 + | acetylxylan esterase TERM 4034 3724756 - 3724787 + T 100 -14.4 -3.86252 | opp_overlap 3724756 ACCGTACAAAAAAAA GCCCCGCCCAAACA CTAC TATTCGGGCGGGGC TTATCTTTACTAGAA TERM 4035 3724787 - 3724756 - T 100 -18.8 -5.94713 | opp_overlap 3724756 ACCGTACAAAAAAAA GCCCCGCCCAAACA CTAC TATTCGGGCGGGGC TTATCTTTACTAGAA Sde_2934 3726690 - 3724831 - | endo-1,4-beta-xylanase TERM 4036 3726850 - 3726866 + r 100 -10.9 -5.12707 | opp_overlap 3726849 3726853 AACGGATCGAATTAC CAAGTGG AGC CCACTTG TTTTTTAACGTTTAA TERM 4037 3727134 - 3727102 - R 100 -15 -3.44792 | opp_overlap 3727099 3727105, overlap 3727095 AATAGCAAGTGACAA CTAGTGGACTAGAG CGCAC CTCTTGTCCACTAG CCCACTTTGTTTTCG TERM 4038 3727105 - 3727139 + r 71 -4.9 -4.68655 | opp_overlap 3727102 3727095, overlap 3727099 AGCAAGTGACAACTA GTGGACTAGAGCGCA CCTCT TGTCCACTAGCCCAC TTTGTTTTCGGCTTG Sde_2935 3729023 - 3727209 - | beta-galactosidase TERM 4039 3727643 - 3727631 - G 73 -7.7 -4.06419 | CGGGCTGATAAATAA CGTTG TCC CAACG GATGCGAAATGCATT TERM 4040 3728897 - 3728910 + g 72 -6.7 -4.27512 | GCGTGGGTAACGGGC CCCAA AGCT TTGGG TTATTTATTGTAGCG TERM 4041 3728919 - 3728943 + g 83 -4.3 -5.44721 | CTTTGGGTTATTTAT TGTAGCGTTAG CCG TTACCGTTACA TTTTTTTGCGCTGGT Sde_2936 3729976 - 3729047 - | beta-galactosidase TERM 4042 3729848 - 3729863 + g 72 -6 -4.431 | opp_overlap 3729848 3729850, overlap 3729850 GCCAGTATCTAGTAA CACGCG TTCA CGCGGG TTTTCTGGCTGGGTG Sde_2937 3731508 - 3730327 - | hypothetical protein TERM 4043 3731587 - 3731571 - H 79 -10.9 -2.96517 | opp_overlap 3731569, overlap 3731568 3731565 ATTCACGAACAATTA TGCGCTT AGA AAGCGCA AGTTGAATAGAGGTA TERM 4044 3733184 - 3733206 + G 75 -9.8 -3.48276 | CTCCCGCCCACGGTG CTAGCAGCTG TAA CAGCGGCTGG TTATGTGAACACCGC Sde_2938 3732199 - 3733890 + | ATPase TERM 4045 3733932 - 3733968 + T 100 -15.3 -3.61268 | opp_overlap 3733934, overlap 3733934 TTACATAAGGGAATA AAGCAGGTGGCGTAAAA TAA TTTTACTCCACCTGCTA TTTAACACTTACGTA TERM 4046 3733934 - 3733966 + T 100 -17.9 -3.38314 | opp_overlap 3733934, overlap 3733932 ACATAAGGGAATAAA GCAGGTGGCGTAAAA TAA TTTTACTCCACCTGC TATTTAACACTTACG TERM 4047 3733966 - 3733934 - T 100 -17.9 -4.28069 | opp_overlap 3733934 3733932 ACATAAGGGAATAAA GCAGGTGGCGTAAAA TAA TTTTACTCCACCTGC TATTTAACACTTACG Sde_2939 3736446 - 3734083 - | ATPase TERM 4048 3735231 - 3735218 - G 74 -8.1 -3.97042 | opp_overlap 3735217 3735218 GCAGCAGTAACCAAA GGCGT ACCT ACGCC ATTTTCGTCGTAAAC TERM 4049 3736233 - 3736261 + g 90 -14.8 -3.28712 | CTACAGCAAGCTCCG CACTCCAACTAT TGTTT ATAGTTGGAGTG TTATCGAACAACAAA Sde_2940 3737393 - 3736962 - | hypothetical protein Sde_2941 3738180 - 3737467 - | glutamine amidotransferase related enzyme Sde_2942 3739175 - 3738177 - | hypothetical protein TERM 4050 3739507 - 3739519 + G 81 -3.3 -5.42131 | overlap 3739501 ACTGCACCTCACGCT GCGTG CGC CGTGC TTTTTTGTGTGGTTA TERM 4051 3739907 - 3739918 + G 74 -5.8 -4.59773 | opp_overlap 3739896 3739907 AAACGCAGAAGACCA CTGC ACTG GCAG TTTTTGGGAATCGCG Sde_2943 3739440 - 3740417 + | histidine kinase TERM 4052 3740594 - 3740560 - T 87 -8.6 -4.50841 | opp_overlap 3740562, overlap 3740562 ATAAGAATATGAAAA CCGGCAATAGTGAAGA TTT CCTTAACTACTGCCTG TCTCTAATTGTTCGC TERM 4053 3740592 - 3740562 - T 70 -9.8 -2.56242 | opp_overlap 3740562, overlap 3740560 AAGAATATGAAAACC GGCAATAGTGAAGA TTT CCTTAACTACTGCC TGTCTCTAATTGTTC TERM 4054 3740743 - 3740708 - T 86 -2.6 -5.89921 | ACCACAATAAAAAAA CAGGCAGTAGCTAA TATCCCCC TTAACTCATGCCTG TCTCTAATTGTTACC TERM 4055 3740812 - 3740798 - T 73 -8.6 -3.60818 | TTAAAATTTGTGAAA GCGATT AAA AATCGC CGGTATTTAGGGGTA TERM 4056 3740917 - 3740882 - T 80 -2.6 -5.54885 | AACAGGAATAAAAAA CAGGCAGTAGCTAA TATCCCCC TTAACTCATGCCTG TCTCTAATTGTTGTC Sde_2944 3741500 - 3740955 - | two component LuxR family transcriptional regulator Sde_2945 3742395 - 3741550 - | hypothetical protein TERM 4057 3742774 - 3742735 - R 70 -9.6 -2.80492 | overlap 3742732 GACTAGTACCAACGA GGTTTAACTAATTTGT GTGTTTTT ACAATTTAGTTAAACC GGATTAAAACTGCCA TERM 4058 3743749 - 3743769 + r 84 -11.1 -3.70438 | opp_overlap 3743749 TCGCCAAACAAAAAA GCCCCAGTC AAT GACTAGGGC TTTGAGTGATAATTT TERM 4059 3743769 - 3743749 - R 100 -13.3 -5.63517 | opp_overlap 3743749 TCGCCAAACAAAAAA GCCCCAGTC AAT GACTAGGGC TTTGAGTGATAATTT TERM 4060 3743826 - 3743810 - R 70 -9.4 -2.77233 | opp_overlap 3743819, overlap 3743802 3743809 CGAGAATTGCGAAAT TCGCCG GAAGG CGGCGA CGCCTTTCTCGGCCT TERM 4061 3743819 - 3743830 + r 70 -7.2 -3.87815 | opp_overlap 3743810 3743809 CGAAATTCGCCGGAA GGCG GCGA CGCC TTTCTCGGCCTACAA TERM 4062 3743854 - 3743878 + r 86 -5.6 -5.40072 | opp_overlap 3743848 3743859 CCTACAAATGCGGTA TACAACGCGG CTTTA CCGCGCCGTA TTTTTTTGGAGGGGC TERM 4063 3743873 - 3743859 - R 76 -9.2 -3.49668 | opp_overlap 3743854, overlap 3743848 AAATGCGGTATACAA CGCGGC TTT ACCGCG CCGTATTTTTTTGGA Sde_2946 3746094 - 3743893 - | hypothetical protein TERM 4064 3744543 - 3744556 + g 78 -5.2 -5.08601 | TAGGGCCAAAGCCAT CGGC CATGCT GCCG TTTTTCTTGGGATCG Sde_2947 3746414 - 3748138 + | hypothetical protein TERM 4065 3748154 - 3748185 + T 74 -10.2 -2.72649 | overlap 3748153 TCGATAAACGTTAAG CGCTAATCGCTAGT TTTA GCTGGCGATTAGCC ATTCTGTACTAGAGT Sde_2948 3749141 - 3748356 - | metal-dependent hydrolase-like Sde_2949 3751298 - 3749154 - | hypothetical protein TERM 4066 3750290 - 3750278 - G 80 -5.5 -4.93877 | TGGTATTAAATAAAA GGTGC TGC ACACC GTAGGATGCATTTAC TERM 4067 3750635 - 3750612 - G 77 -3.8 -5.1971 | gap 1, overlap 3750614 ATCAAAAAGTAAAAA GTCGC-CCTGC TCG GCAAGCGCTAC AACATGATTACTCGA Sde_2950 3751810 - 3751454 - | hypothetical protein Sde_2951 3752504 - 3751881 - | hypothetical protein TERM 4068 3752058 - 3752076 + g 76 -8.8 -3.67134 | TGACTTGCCATCGTC GCGCCC TGTACGT GGGCGC TTGTTAGGGTAATTT TERM 4069 3752292 - 3752312 + g 82 -6.9 -4.82901 | CAAACTCTTAAACTG GTAGAGGTA AAA TGCTTCTAC TTTTTCTCGCGCCCA Sde_2952 3753225 - 3752548 - | parallel beta-helix repeat-containing protein TERM 4070 3752703 - 3752691 - G 74 -10.5 -3.14393 | overlap 3752689 ACCACACAGCCAACA CGCCC TTA GGGCG CAAGGTGTTGTGAAT TERM 4071 3753368 - 3753382 + r 78 -7.1 -4.55118 | opp_overlap 3753368 TTCAGATAGCAAAAA CTCCC AAAGA GGGAG TTTTATATGAACTTC TERM 4072 3753382 - 3753368 - R 85 -7.1 -4.84527 | opp_overlap 3753368 TTCAGATAGCAAAAA CTCCC AAAGA GGGAG TTTTATATGAACTTC TERM 4073 3753403 - 3753451 + r 76 -11.2 -2.67425 | gap 1, opp_overlap 3753418, overlap 3753402 TATGAACTTCTAGAG TTG-AGTCGCTAACCACTAGTGA TTGG TCTCTAGCGATTAGCGACTACAA ATTATCGATTATCTG Sde_2953 3756467 - 3753453 - | periplasmic protein TonB links inner and outer membranes-like TERM 4074 3756513 - 3756526 + r 86 -6.7 -5.02074 | GCTTGATCGTTATAT TGCCA TTTT TGGCA TTTTTTCAGCGGTAC TERM 4075 3756689 - 3756666 - R 80 -10.3 -3.53563 | opp_overlap 3756666, overlap 3756668 ATATGTGCGGGTAAA TATGCGGGG AGCAAA CCCCGCACA TTTAAACAACAAAGT TERM 4076 3756687 - 3756668 - R 81 -10.7 -3.34517 | opp_overlap 3756666, overlap 3756666 ATGTGCGGGTAAATA TGCGGGG AGCAAA CCCCGCA CATTTAAACAACAAA Sde_2954 3757691 - 3756714 - | hypothetical protein TERM 4077 3756751 - 3756767 + g 70 -2.2 -5.01732 | opp_overlap 3756764 AATGAATATTGCACG GAAGTC GCAGA GACATC TTTTTTACCAAAATT TERM 4078 3757363 - 3757382 + g 82 -2.8 -5.5208 | gap 1, overlap 3757362 3757365 TTAGGGGGCGCAGGC GGTACAGGG GTA CCC-GTAAC TTTTTTCTGTTCTAC Sde_2955 3758250 - 3757693 - | hypothetical protein TERM 4079 3758237 - 3758223 - G 76 -4.2 -5.00616 | opp_overlap 3758225, overlap 3758225 TCTTTTGGTAAAAAA TAGTCG AAC CGACTT CTTTCAACAACATTA TERM 4080 3758235 - 3758225 - G 71 -6.8 -4.13561 | opp_overlap 3758225, overlap 3758223 TTTTGGTAAAAAATA GTCG AAC CGAC TTCTTTCAACAACAT Sde_2956 3758759 - 3758250 - | hypothetical protein Sde_2957 3759503 - 3758775 - | biopolymer transport proteins-like Sde_2958 3759915 - 3759541 - | TonB-dependent receptor TERM 4081 3759578 - 3759608 + g 70 -9.3 -3.34344 | gap 1, opp_overlap 3759576 3759578 3759587 ATTTCGTCGTAAATA TTGATAGA-ACGTA ACAT TACGTCTCTATCAA TTAATTGCAGGGTAG TERM 4082 3759608 - 3759578 - G 70 -9.3 -3.34517 | gap 1, opp_overlap 3759578, overlap 3759576 3759587 ATTTCGTCGTAAATA TTGATAGA-ACGTA ACAT TACGTCTCTATCAA TTAATTGCAGGGTAG Sde_2959 3760609 - 3759917 - | cellulose binding, type IV TERM 4083 3760051 - 3760034 - G 72 -4.9 -4.58663 | opp_overlap 3760034 ACCACCGGTTAAAAA CATATAG GCTT CCATATG CTTTTGCGCACGCAA Sde_2960 3763505 - 3760647 - | cellulose binding, type IV TERM 4084 3761807 - 3761824 + g 72 -4.9 -4.68705 | gap 1 TAAACCAAGAGTGCG CCGCTATA CCG TA-AGCGG TTTTCTTAAGATTGT TERM 4085 3762329 - 3762339 + g 72 -8.2 -3.69069 | TAATACGCTTATCTT GCCC CTT GGGC TTCTCTTCGAGTTCA Sde_2961 3765214 - 3763502 - | hypothetical protein TERM 4086 3763691 - 3763713 + g 83 -4.1 -5.35222 | gap 1, overlap 3763695 GCGCATTACGGGTTC CAAGCGCGCT ATAT AG-GCGCGTG TTTTTTCTAACTTTT TERM 4087 3763695 - 3763711 + g 74 -7.2 -4.28383 | overlap 3763691 ATTACGGGTTCCAAG CGCGCT ATATA GGCGCG TGTTTTTTCTAACTT TERM 4088 3765229 - 3765212 - G 100 -3.4 -6.30182 | opp_overlap 3765202 GCACAGAAAAAAAAA CAAGGT GAAGAG ACCCTG TTTTTTTAGCCTTTT TERM 4089 3765271 - 3765285 + r 78 -4.3 -5.16237 | ATCTATTAATCACTT CTGTT ACCGC AACAG TTTTTTCGTCGCCTT Sde_2962 3765931 - 3765308 - | hypothetical protein Sde_2963 3766116 - 3766877 + | cellulose binding, type IV TERM 4090 3766956 - 3766937 - T 100 -15 -3.24365 | overlap 3766935 CTAGACCGTACAAGA GCGCCCCA AGAA TGGGGCGC GAAGAGAGAAACCTT Sde_2964 3767561 - 3766986 - | hypothetical protein Sde_2965 3768361 - 3767573 - | hypothetical protein TERM 4091 3768515 - 3768488 - R 74 -10.6 -2.68479 | opp_overlap 3768494, overlap 3768487 CTACCAAAGAGGAAG GGCCAACAGGTA AAAG CACCTGTTGGCT AAGAGCTAAAACGCA Sde_2966 3768949 - 3768521 - | helix-turn-helix, AraC type TERM 4092 3768770 - 3768745 - G 76 -9.1 -3.71487 | gap 1 CACCACAGTCAATAA CGCAGCCTAGTA AAC TACTAAGC-GCG GGGTTATGGCTAAGC Sde_2967 3771513 - 3769240 - | ornithine decarboxylase Sde_2968 3772844 - 3771561 - | CorC/HlyC family transporters TERM 4093 3772550 - 3772530 - G 73 -2.5 -5.1963 | overlap 3772533 3772537 3772547 GGTAACCAATAAAAA GGAGCAAGT AAA ACTTACCTC ATCGAGAAACCGCCC TERM 4094 3773281 - 3773257 - R 100 -15.7 -5.252 | opp_overlap 3773278 TATGCCTATAAAAAA GGCCGACGCTC TGG GAACGCCGGCC AAACACGTTAGCCTG Sde_2969 3773681 - 3773331 - | putative formamidase regulatory protein FmdB TERM 4095 3773498 - 3773520 + g 84 -8.4 -4.62471 | GCTCATGCTGGTTGC GCTCGTTTAC TTC GTAAGCGTGC TTTTTAGCGCTTGGC TERM 4096 3773718 - 3773740 + r 74 -4.1 -4.95484 | gap 1, overlap 3773721 CTGCATCATGTGGTG CT-AAGGGGC TTTC GCCCCGTGAG TTTTGTTTACTACTC Sde_2970 3774982 - 3773750 - | formamidase Sde_2971 3775907 - 3775218 - | branched-chain amino acid ABC transporter, ATP-binding protein Sde_2972 3776695 - 3775949 - | response regulator receiver domain-containing protein TERM 4097 3776372 - 3776356 - G 71 -7.2 -4.14739 | opp_overlap 3776369 CTAGCGAGCCTAAAA CCCCAC GTCCT GCGGGG TAAGACACCTCTAAA Sde_2973 3777884 - 3776733 - | branched-chain amino acid ABC transporter, permease protein TERM 4098 3777710 - 3777695 - G 72 -9 -3.51232 | overlap 3777691 CCTGCCCTAAACTAA GGGTAC CGCC GTACCC CCACAACAAAACTAA TERM 4099 3777943 - 3777917 - R 71 -8.7 -3.34468 | opp_overlap 3777917, overlap 3777915 3777913 GCCTAAGTAAACACA GATACGCCGCT GTATT AGCGACGCACC TTACTGGCAAACAAA Sde_2974 3778854 - 3777931 - | putative branched-chain amino acid transport system permease protein Sde_2975 3780178 - 3778928 - | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein TERM 4100 3779732 - 3779750 + g 81 -5.2 -5.26119 | CCCTTCGTAAAACGT TGGGTAGT ACA GCAACCCA TTTTCTTTTTCAAAC TERM 4101 3781968 - 3781981 + G 76 -8.1 -4.08706 | TTTCTCACTTTATTG CGCTG GCCA CAGCG TTTATATGCTCGCCC TERM 4102 3782395 - 3782410 + G 95 -7.6 -5.31275 | opp_overlap 3782397 CCAGCTACTGGAAGC CACCTT ATGG AAGGTG TTTTTTATACTCACC Sde_2976 3780587 - 3783985 + | two-component hybrid sensor and regulator Sde_2977 3783982 - 3784893 + | response regulator receiver domain-containing protein Sde_2978 3785901 - 3784933 - | putative zinc-binding oxidoreductase Sde_2979 3786622 - 3785987 - | glutathione S-transferase Sde_2980 3787164 - 3786673 - | hypothetical protein Sde_2981 3787763 - 3787188 - | hypothetical protein Sde_2982 3788456 - 3787932 - | hypothetical protein TERM 4103 3788044 - 3788066 + g 82 -2.6 -5.52384 | opp_overlap 3788044, overlap 3788046 CCTATAATCACCATA TGCGGAATAG CTT CTACGCCGTA TTTTTTTGCTACACG Sde_2983 3788877 - 3788500 - | hypothetical protein Sde_2984 3789698 - 3788979 - | C-5 sterol desaturase TERM 4104 3790819 - 3790839 + G 71 -7.5 -3.84451 | opp_overlap 3790810 3790819 3790820 TTTAAAGGCACAGAA GGTGTAGCC ACC GGCAATACC TTTAACTTTGCCAAC TERM 4105 3791936 - 3791915 - g 74 -7.2 -4.31397 | opp_overlap 3791913 3791915 3791922, overlap 3791912 ATTGGGAGAAAATAA GCGGTGGC TGGACT GGCACCGC TATTCAGTTCGATGT Sde_2985 3789988 - 3791991 + | hypothetical protein TERM 4106 3792053 - 3792026 - T 74 -7 -4.32436 | opp_overlap 3792027 3792032, overlap 3792027 ACACCATTACTAAAA CTTAAACCCCGC TTAG GAGGGGTTTAAT ACTCTCAGAAAGCCA TERM 4107 3792027 - 3792052 + T 74 -10.5 -2.62184 | opp_overlap 3792026 3792027, overlap 3792032 CACCATTACTAAAAC TTAAACCCCGC TTAG GAGGGGTTTAA TACTCTCAGAAAGCC TERM 4108 3792052 - 3792027 - T 77 -10.5 -3.18738 | opp_overlap 3792027 3792032, overlap 3792026 CACCATTACTAAAAC TTAAACCCCGC TTAG GAGGGGTTTAA TACTCTCAGAAAGCC Sde_2986 3795429 - 3792301 - | hypothetical protein TERM 4109 3793651 - 3793630 - G 70 -2.3 -5.00616 | gap 1, opp_overlap 3793634, overlap 3793631 3793632 TGTTTGCTTAAAAAA CGCGGCAAAA CTT TTTTGCTG-G TCTAGCGTATTGCCG Sde_2987 3796737 - 3795658 - | YD repeat-containing protein TERM 4110 3796980 - 3796939 - R 100 -17.5 -3.48474 | opp_overlap 3796935, overlap 3796942 TAAAGCGATAACCAA CAACCTCTAGCCACACC AATAAACA GGCGTGGCTAGAGGTTA GAAAGTTGGCTTATT TERM 4111 3796977 - 3796942 - R 100 -17 -3.86312 | opp_overlap 3796935, overlap 3796939 AGCGATAACCAACAA CCTCTAGCCACACC AATAAACA GGCGTGGCTAGAGG TTAGAAAGTTGGCTT Sde_2988 3798115 - 3796991 - | alpha/beta fold family hydrolase-like protein TERM 4112 3797153 - 3797165 + g 83 -6.3 -4.98531 | TGGAGCGCCCACCTG GCTAA GCA TTAGC TTTTTGCTTTCGAAA Sde_2989 3798591 - 3800015 + | Ricin B lectin Sde_2990 3800012 - 3801256 + | cellulose binding, type IV TERM 4113 3801348 - 3801363 + T 100 -11.8 -3.74077 | opp_overlap 3801348 TATACGCACAAAAAA GCCCGC GGTA GCGGGC TTTGAGTGTCTCGGC TERM 4114 3801363 - 3801348 - T 100 -11.8 -5.29782 | opp_overlap 3801348 TATACGCACAAAAAA GCCCGC GGTA GCGGGC TTTGAGTGTCTCGGC Sde_2991 3804465 - 3801424 - | hypothetical protein TERM 4115 3801754 - 3801736 - G 90 -13.2 -3.49951 | overlap 3801721 TACATTCTCAGAGAA GCCTGGTA CGT TACCAGGC TCCACTATACCAATG TERM 4116 3803990 - 3804002 + g 72 -2.7 -4.96388 | CTGGCGTCTTGGGTT TTGTA AAT TGCAA TTTTGTTTACTAATT TERM 4117 3805344 - 3805325 - R 95 -7.1 -5.52384 | opp_overlap 3805325 TCTGCATCAAAAAAA GCCCCTC ACGCAG AAGGGGC TTATAAAACATAACT Sde_2992 3808339 - 3805391 - | helix-turn-helix, AraC type TERM 4118 3807553 - 3807566 + g 72 -6.7 -4.23892 | GGTAAGCCCCTGGTT CGAAC TGAC GTTCG TTTTGCATGCTTAAG TERM 4119 3808615 - 3808588 - R 100 -9.8 -4.83169 | opp_overlap 3808588, overlap 3808589 ATCTGGCTAGAAAAA GGGGGCGCAC CTTTTTCT GTGCGCCCCA AGGGACTACTCATGC TERM 4120 3808614 - 3808589 - R 100 -13.3 -3.49419 | opp_overlap 3808588, overlap 3808588 TCTGGCTAGAAAAAG GGGGCGCAC CTTTTTCT GTGCGCCCC AAGGGACTACTCATG Sde_2993 3811234 - 3808643 - | endoglucanase-like TERM 4121 3809668 - 3809686 + g 71 -10.2 -2.7464 | overlap 3809667 TTACTGGCGCAGTGA GGCTGCCA ACT TGGCTGCC ATTTACCGCTACGTT TERM 4122 3810157 - 3810168 + g 83 -4.4 -5.40072 | TCGTCCAAAGGGTTT TGTC GTGC GACA TTTTTTTGAACGACC TERM 4123 3811709 - 3811736 + r 91 -8.4 -4.62772 | opp_overlap 3811715, overlap 3811715 GAGATATTTAGATAC AAAAAACGGCGC GTAA GCGCCGTTTGTA TTTGTTTAGTTTAAA TERM 4124 3811715 - 3811730 + r 100 -11.8 -4.50993 | opp_overlap 3811715, overlap 3811709 TTTAGATACAAAAAA CGGCGC GTAA GCGCCG TTTGTATTTGTTTAG TERM 4125 3811730 - 3811715 - R 100 -11.8 -5.4251 | opp_overlap 3811715 3811709 TTTAGATACAAAAAA CGGCGC GTAA GCGCCG TTTGTATTTGTTTAG Sde_2994 3813265 - 3811820 - | glucosylceramidase TERM 4126 3813349 - 3813291 - R 100 -23.7 -3.26947 | gap 1, opp_overlap 3813292 3813292 3813302, overlap 3813292 3813302 TAATGTTTATAGGAA CCTCTGAATAACCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGGTTATTCAGAG- GTTCCTATACAGCTA TERM 4127 3813292 - 3813350 + r 100 -21.5 -3.26471 | gap 1, opp_overlap 3813291 3813292 3813302, overlap 3813292 3813302 AATGTTTATAGGAAC -CTCTGAATAACCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGGTTATTCAGAGG TTCCTATACAGCTAA TERM 4128 3813349 - 3813292 - R 100 -29.7 -2.55847 | opp_overlap 3813292 3813292 3813302, overlap 3813291 3813302 AATGTTTATAGGAAC CTCTGAATAACCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGGTTATTCAGAG GTTCCTATACAGCTA TERM 4129 3813292 - 3813349 + r 100 -27.5 -2.55668 | opp_overlap 3813291 3813292 3813302, overlap 3813292 3813302 AATGTTTATAGGAAC CTCTGAATAACCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGGTTATTCAGAG GTTCCTATACAGCTA TERM 4130 3813302 - 3813339 + r 100 -14.3 -3.63569 | opp_overlap 3813291 3813292 3813302, overlap 3813292 3813292 GGAACCTCTGAATAA CCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGG TTATTCAGAGGTTCC TERM 4131 3813339 - 3813302 - R 100 -16.5 -3.63569 | opp_overlap 3813302 3813292 3813292, overlap 3813291 3813292 GGAACCTCTGAATAA CCCCAATTACTCTTTGC GAGA GCCAAAAGTAATTGGGG TTATTCAGAGGTTCC Sde_2995 3815445 - 3813442 - | hypothetical protein TERM 4132 3815744 - 3815700 - R 79 -10.9 -3.20858 | opp_overlap 3815692 3815697 3815700 3815702 3815718 3815725, overlap 3815692 TATTACAGCTACTAA TAGCTAACTTCTAATCACTAG CTT CTAGCTATTAGCTGTTAGCTA TCCTATTTAATTTCA Sde_2996 3818308 - 3815747 - | endoglucanase-like TERM 4133 3817615 - 3817574 - G 79 -10.1 -3.67775 | opp_overlap 3817573 3817588 AGGTTCATTTAATAA GCCGTACCCTGCAACAGTG GCTT CACCGTTATAGCGTTCGGC AATTTTGCCCCACAG Sde_2997 3820179 - 3818422 - | hypothetical protein TERM 4134 3820248 - 3820230 - R 71 -6.6 -4.08064 | overlap 3820234 AACTGCGCGTTAAAA CGAACACC CAT GGTGCGCG GTGCAGAGAATCGAC Sde_2998 3822604 - 3820211 - | helix-turn-helix, AraC type TERM 4135 3823575 - 3823585 + G 88 -5.4 -5.5353 | TATTACACGCGCTGC CAGT CAT ACTG TTTTTTATTCATATG Sde_2999 3823238 - 3824452 + | response regulator receiver/GGDEF/EAL domain-containing protein TERM 4136 3824472 - 3824450 - T 76 -7 -4.56597 | GTTCGGCGGGAAAAA TAAGGCGG ATGTACA CCGCCTCA GACTGATGACAAACC TERM 4137 3824561 - 3824536 - T 100 -11.3 -4.93696 | opp_overlap 3824535 3824534 GTGAAAGATCAAAAA TGCTCAATTCA TGGA CGAATTGAGCA AGTTATAGGGACATA TERM 4138 3824672 - 3824688 + T 95 -9.4 -4.41494 | opp_overlap 3824669 3824672 TTATCAATAAACTGA GGCGGT TGTAC ACCGCC TTTTGCTTGACGCTC TERM 4139 3824688 - 3824672 - T 70 -9.4 -2.77283 | opp_overlap 3824672, overlap 3824669 TTATCAATAAACTGA GGCGGT TGTAC ACCGCC TTTTGCTTGACGCTC Sde_3000 3825413 - 3824724 - | response regulator receiver domain-containing protein TERM 4140 3824925 - 3824936 + g 76 -2.2 -5.4505 | overlap 3824922 TTGGGTCATGTTTTT GCGT ACAA ATGC TTTTTTGTTAGCGAA Sde_3001 3826536 - 3825424 - | DEAD/DEAH box helicase-like Sde_3002 3828480 - 3826588 - | TonB-dependent receptor TERM 4141 3828674 - 3828706 + H 75 -7.1 -4.34737 | overlap 3828677 AAAGCTCAAACAGCT CATGCGCTATTTT CGAAATA AGAATAGCGCTTG TTTATTACTTAATGA TERM 4142 3828677 - 3828703 + H 75 -7.4 -4.27694 | overlap 3828674 GCTCAAACAGCTCAT GCGCTATTTT CGAAATA AGAATAGCGC TTGTTTATTACTTAA TERM 4143 3828882 - 3828896 + H 70 -2.8 -4.94262 | opp_overlap 3828856 AGCGGCTAACTAAGG GTTGAA CGA TACAAC TTTATTTTTGGTATA TERM 4144 3830551 - 3830539 - g 75 -6.3 -4.42386 | CGTGCAGCTAGAAAA CACAT CCG ATGTG GGCGGCGGCCAAAAC TERM 4145 3830822 - 3830787 - g 74 -8.4 -3.87104 | GCCACACCATAACAA TTCCCGCTAACGCAAA CGGC TTTGCACTAGCAGCAA TAGATGGCGGTTGGA TERM 4146 3830960 - 3830935 - g 74 -11.1 -2.75957 | overlap 3830937 CATCAACTTTAACGA CACCACCCCCG GTAA CGAAGGCGGTG CACACAGAAGCGATG TERM 4147 3831162 - 3831145 - g 73 -9.9 -3.38415 | overlap 3831143 3831141 GCAACTACAAATAGA TGGCCAA AACG TTGGCCA AGCCATTACCGTTGG TERM 4148 3831704 - 3831692 - g 74 -3.3 -5.06414 | TGGGGCCAAGAAAAA TGGTG GAA CGCCA GCACCGTGGACCGCA Sde_3003 3828980 - 3832483 + | hypothetical protein TERM 4149 3832573 - 3832600 + T 100 -14.2 -5.44198 | opp_overlap 3832569 3832567, overlap 3832574 GTTTAGCAACACCTA CCGTGGTTAGGC CTTC GCCTAACCACGC TTTTTATTATTTATT TERM 4150 3832574 - 3832599 + T 100 -17.7 -3.82859 | opp_overlap 3832569 3832567, overlap 3832573 TTTAGCAACACCTAC CGTGGTTAGGC CTTC GCCTAACCACG CTTTTTATTATTTAT Sde_3004 3832881 - 3832627 - | RebB protein Sde_3005 3833909 - 3832998 - | response regulator receiver modulated diguanylate cyclase Sde_3006 3835084 - 3834155 - | hypothetical protein TERM 4151 3835163 - 3835186 + r 78 -7.5 -4.54553 | gap 1, opp_overlap 3835163 CCCAAAAAGTAAAAA CCGAGCT-CT ATAAA AGCAGCTCGG TTTATTGTATTTATA TERM 4152 3835186 - 3835163 - R 90 -7.5 -5.18355 | gap 1, opp_overlap 3835163 CCCAAAAAGTAAAAA CCGAGCT-CT ATAAA AGCAGCTCGG TTTATTGTATTTATA Sde_3007 3836481 - 3835207 - | N-acetylglucosamine-6-phosphate deacetylase TERM 4153 3837096 - 3837109 + H 72 -8.1 -3.86897 | CCCGATAAAGTGCAG CTGCC ATCG GGCAG TTTCTAACCGGTAGC TERM 4154 3837477 - 3837466 - H 70 -3.6 -4.84527 | TGTATATATTAAAAA CAGC GACT GCCG AGGCTCTATCTTGGT Sde_3008 3837720 - 3838028 + | hypothetical protein Sde_3009 3838487 - 3838152 - | regulatory protein, LacI Sde_3010 3839889 - 3839329 - | hypothetical protein Sde_3011 3841082 - 3840756 - | hypothetical protein Sde_3012 3841454 - 3841134 - | diguanylate cyclase/phosphodiesterase TERM 4155 3841278 - 3841264 - G 73 -4.2 -4.8143 | TGAATAAGGGAAAAA CGCATT TTC ATTGCG TCGTCGCTCGGTAGG TERM 4156 3841790 - 3841804 + r 93 -2.8 -5.96219 | opp_overlap 3841791, overlap 3841791 CTCTGGCACGCCAAC AGAGAT CCA ATCTCC TTTTTTTTGTGCGTC Sde_3013 3842311 - 3842006 - | response regulator receiver domain-containing protein TERM 4157 3842245 - 3842226 - G 72 -5 -4.60977 | opp_overlap 3842221 3842219 3842228, overlap 3842221 3842228 AAGATAAGTACAAAA TCCCCATT TGCT AATGGGTA TATTGTCTTTATCGT Sde_3014 3842691 - 3842389 - | hypothetical protein Sde_3015 3843342 - 3842971 - | hypothetical protein Sde_3016 3843709 - 3843362 - | hypothetical protein TERM 4158 3843940 - 3843950 + G 79 -4.6 -5.24531 | TGCACCTCTCGATGT GTGC GCC GCGC TTTTTTGTGCGGGGT Sde_3017 3843871 - 3844848 + | hypothetical protein TERM 4159 3844980 - 3845025 + T 79 -8.5 -4.19887 | opp_overlap 3844986, overlap 3844984 3844988 TAAAACTAACGAAAA TTAAAACAGGCACTAATTAAA TTTC TTTAACTAGTGCCTGTCTCGA TTATTCTTTCTGTCT TERM 4160 3844984 - 3845021 + T 81 -11.5 -2.74293 | opp_overlap 3844986, overlap 3844980 3844988 ACTAACGAAAATTAA AACAGGCACTAATTAAA TTTC TTTAACTAGTGCCTGTC TCGATTATTCTTTCT TERM 4161 3845019 - 3844986 - T 100 -16.3 -4.72729 | opp_overlap 3844984 3844980 3844988 TAACGAAAATTAAAA CAGGCACTAATTAAA TTTC TTTAACTAGTGCCTG TCTCGATTATTCTTT TERM 4162 3844988 - 3845017 + T 79 -10.9 -2.9857 | opp_overlap 3844986, overlap 3844984 3844980 ACGAAAATTAAAACA GGCACTAATTAAA TTTC TTTAACTAGTGCC TGTCTCGATTATTCT Sde_3018 3845497 - 3845138 - | hypothetical protein Sde_3019 3846061 - 3845681 - | TonB-dependent receptor TERM 4163 3845803 - 3845816 + g 79 -3.1 -5.37593 | opp_overlap 3845791 3845796, overlap 3845796 3845794 TTACGATATATCGAT CGATA TACT TGTCG TTTTTTGATTTCAAA Sde_3020 3854359 - 3846071 - | hypothetical protein TERM 4164 3848274 - 3848245 - G 70 -9.5 -2.94416 | gap 1, opp_overlap 3848253, overlap 3848247 TACTTTGAGCATACA TACCCGAATTCGCA GAT TGCGAATT-GAGTA GACCCGACGCGACAT TERM 4165 3852693 - 3852681 - G 75 -6.3 -4.4078 | CCCCCTGAACCAAAA GCATA CTC TATGC GATCGACCCTAAAAT TERM 4166 3853188 - 3853168 - G 75 -3.1 -5.11254 | overlap 3853170 3853173 AATAAGAAAAAGAAA CAGAAGGGG TTA CACCTGCCG TACCGGCCGGCGTAA TERM 4167 3853207 - 3853173 - G 87 -10.6 -4.11447 | overlap 3853168 3853170 GAAAAAGAAACAGAA GGGGTTACACCTGCCG TAC CGGCCGGCGTAAACAC CGAGATAGTGTAAGT TERM 4168 3854143 - 3854166 + g 77 -3.8 -5.13722 | gap 1, overlap 3854143 3854144 TTGCAACCAAATCGG CCCT-GGCCTC GTA GAGGCTAAGCG TTTTCTTTTCATCGG TERM 4169 3854641 - 3854662 + r 70 -7.3 -3.85698 | AAATTAATCTGGCAA CTTGGTTTG CATG CAACCCAAG TTTATGCAGCACACA Sde_3021 3857548 - 3855380 - | Beta-glucanase/Beta-glucan synthetase-like TERM 4170 3856176 - 3856191 + g 73 -4 -4.8048 | opp_overlap 3856169 ATTGTAAAGTGGCTA CTGTAA CCGC TTACGG TTTTTACTGTAGGCC TERM 4171 3856930 - 3856916 - G 79 -2.8 -5.28176 | GCCATCTATAAAAAA GCTAAT GTT ATTTGC ATCCCACTCCATGGC TERM 4172 3857999 - 3857961 - R 81 -11 -3.2396 | overlap 3857983 AACTATTAGCAGTAA TTGACAGCACCCAGCGCT ACA ACCGCTGAGCGCCACCAA TAAGACTGTAAATTA Sde_3022 3859946 - 3858012 - | hypothetical protein Sde_3023 3862818 - 3860209 - | endoglucanase-like TERM 4173 3860614 - 3860602 - G 71 -7.7 -3.87994 | opp_overlap 3860602, overlap 3860606 ATGCACGGCTACAAA GGTAG TGG CTACC TCTTGGCTGCGATAG TERM 4174 3862979 - 3863000 + H 74 -8.1 -4.02571 | GTGGGCCAAGTAGTC GTTCGTTTG GCCT TAAACGAAC TTATTTGGTGACTTA TERM 4175 3863244 - 3863234 - g 79 -3.2 -5.36314 | GAAAAGAGTAAAAAA TGGA CAA CCCA ATAGAAGAAAATATA Sde_3024 3863233 - 3863736 + | branched-chain amino acid aminotransferase I TERM 4176 3863864 - 3863828 - T 74 -10.2 -2.65116 | gap 1, opp_overlap 3863855, overlap 3863827 CGAGTACGCAAATAC TCTAGTGGCGAGCGCGT AGGC ACGCGCT-GCCACAACA TCGCGGCATGTAATT Sde_3025 3865549 - 3864377 - | AraC family transcriptional regulator TERM 4177 3865499 - 3865487 - G 81 -3.3 -5.28481 | overlap 3865493 CAGGCAAGCAAAAAA CAAGC ACT GCATG GCTGTCATCCAAAGG TERM 4178 3866228 - 3866248 + H 100 -16.9 -5.41143 | TTTCTGTAACTCTTA GCTCCGTGG TTA CCACGGAGC TTTTTTTAACCAATA TERM 4179 3866575 - 3866545 - g 78 -6.1 -4.63218 | overlap 3866548 3866549 TGCTTCTTAATAAAA TGACGCTAACCGA AAAAA TCGGTCAGCTGCA ATTACGCGACTGGGG Sde_3026 3866544 - 3866915 + | GntR family transcriptional regulator TERM 4180 3866982 - 3866960 - T 90 -5.6 -5.48213 | gap 1, opp_overlap 3866960 TACTTAAAAGAAAAA GGGC-TAGC TGTTCG GCTAAGCCC TTTTTTGGTCGATAA TERM 4181 3866960 - 3866982 + T 87 -6.3 -5.1675 | gap 1, opp_overlap 3866960 TACTTAAAAGAAAAA GGGC-TAGCT GTTC GGCTAAGCCC TTTTTTGGTCGATAA Sde_3027 3867982 - 3867014 - | hypothetical protein TERM 4182 3867078 - 3867088 + g 72 -3.2 -5.04733 | opp_overlap 3867067, overlap 3867067 TTAACGCCTTTTTCC GTGG CGT CTAC TTTTATTTCTACTTC Sde_3028 3868557 - 3867979 - | periplasmic protein-like Sde_3029 3869238 - 3868582 - | hypothetical protein TERM 4183 3869156 - 3869128 - G 100 -16.2 -5.71712 | opp_overlap 3869130 3869134 CGTTATACAAAAAAA TATCAACAGCGC AAAAA GCGCTGTTGATA TATAGATGTGAAGAA TERM 4184 3869130 - 3869154 + g 87 -14.4 -2.93382 | opp_overlap 3869128, overlap 3869134 TTATACAAAAAAATA TCAACAGCGC AAAAA GCGCTGTTGA TATATAGATGTGAAG TERM 4185 3869134 - 3869150 + g 70 -9.4 -3.33261 | opp_overlap 3869128, overlap 3869130 ACAAAAAAATATCAA CAGCGC AAAAA GCGCTG TTGATATATAGATGT Sde_3030 3871353 - 3869272 - | putaive Fe-regulated protein B precursor TERM 4186 3870885 - 3870903 + g 76 -8.8 -3.7229 | overlap 3870887 GGCCACCAAAATCTT GCCCTGCT GCG AGCAGGTC TTTGGCGTCTTTTGT TERM 4187 3870887 - 3870901 + g 73 -10 -3.42976 | overlap 3870885 CCACCAAAATCTTGC CCTGCT GCG AGCAGG TCTTTGGCGTCTTTT TERM 4188 3871860 - 3871846 - g 83 -9.2 -4.19704 | overlap 3871810 3871802 TAACCTCACCCAAAA CGCCGC ATG GCAGCG CAAACTGACCAACAA Sde_3031 3871493 - 3872512 + | AraC family transcriptional regulator TERM 4189 3872816 - 3872795 - f 81 -7.4 -4.59109 | overlap 3872801 TATAGCCCGCAAAAA GTAAAAGG TATAAG CCTTTTAC CACGACTCAAAATAA TERM 4190 3872817 - 3872801 - f 70 -3.7 -4.77757 | overlap 3872795 CCGCAAAAAGTAAAA GGTATAA GCC TTTTACC ACGACTCAAAATAAA TERM 4191 3873277 - 3873263 - g 89 -4.2 -5.69379 | ACACAACGAAAAAAA GCGCAA ACA TCGCAC TTATTACACAGCCAC TERM 4192 3873703 - 3873727 + G 78 -6.5 -4.66163 | gap 1, opp_overlap 3873694 3873702 GCAAAAGCAAATAGT TGCAACGCCC TCTATT GGG-GTTGCA TTTTTACCTCAACCT Sde_3032 3872852 - 3874633 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Sde_3033 3875182 - 3874727 - | hypothetical protein Sde_3034 3875326 - 3877113 + | ATP-dependent RNA helicase DeaD TERM 4193 3877166 - 3877143 - f 100 -13.2 -3.84246 | gap 1, opp_overlap 3877143 TTGTTAATTACCAAA GGCCC-ACAGG TTT CCTGTTGGGCC TTTTTTATGGCCAAC TERM 4194 3877143 - 3877166 + F 100 -13.2 -5.24129 | gap 1, opp_overlap 3877143 TTGTTAATTACCAAA GGCCC-ACAGG TTT CCTGTTGGGCC TTTTTTATGGCCAAC Sde_3035 3877481 - 3880159 + | TonB-dependent receptor TERM 4195 3880421 - 3880447 + F 100 -10.2 -5.1963 | overlap 3880422 GATTTAGCATTTGGT TGTGGTTAATGC TCT GCATTAGCCACC TTTTTATTCCTTGGG TERM 4196 3880422 - 3880446 + F 100 -13.7 -3.70694 | overlap 3880421 ATTTAGCATTTGGTT GTGGTTAATGC TCT GCATTAGCCAC CTTTTTATTCCTTGG TERM 4197 3880572 - 3880536 - f 76 -10.7 -2.72973 | opp_overlap 3880541, overlap 3880532 3880535 CCAAAAATTCACAAT TGCAGCGCAGGCCGCTA TAG TCGCGCCCAGCGTTGCA TAAAAACAAATAAAC Sde_3036 3880638 - 3881549 + | hypothetical protein TERM 4198 3881564 - 3881589 + F 100 -11.9 -4.03611 | ATATATTTAGCCCAA TGTGTTACGCC TTAT GGCGCAACACA TTCTTTAACTATTTT TERM 4199 3882522 - 3882498 - g 77 -7.1 -4.52589 | opp_overlap 3882517 CTTGGCGAGACAAAA CGGTTATAGGC CAT ACCTACGACCG CGACGTAGCTTACAA TERM 4200 3883243 - 3883226 - g 80 -5.5 -4.96848 | overlap 3883231 3883238 GCTGGCACAGAAAAA GCCAAGC ACAT ACTCGGC GCCCAAGGGCAACTG Sde_3037 3881762 - 3884149 + | glycosyl hydrolase TERM 4201 3884209 - 3884192 - g 76 -9.1 -3.81428 | ACGAACTAACTCAAA GCGCAGC CCCC GCTGCAC GTGCACCTAGCACGC Sde_3038 3884170 - 3885501 + | multiple antibiotic resistance (MarC)-related proteins TERM 4202 3885540 - 3885561 + F 100 -10.9 -5.26875 | opp_overlap 3885540 ATTAGCGTTTGAAAA GGCATACTC TGGT GGGTATGCC TTTTTTAGTTAACGC TERM 4203 3885561 - 3885540 - f 83 -8.7 -4.08945 | opp_overlap 3885540 ATTAGCGTTTGAAAA GGCATACTC TGGT GGGTATGCC TTTTTTAGTTAACGC TERM 4204 3885745 - 3885761 + G 72 -5.7 -4.41348 | opp_overlap 3885745, overlap 3885746 TGATACTTGTGAACA CCCCCGG CGA CTGGGGC TTTGTTTACGCCCCC Sde_3039 3885672 - 3886763 + | hypothetical protein TERM 4205 3886871 - 3886845 - T 84 -3.5 -5.51402 | overlap 3886833 3886846 ATACAGGCAAAAAAA TGCCCGCCACC TTGCG GAAAGCGGGCT AATCACCTATCAGAG Sde_3040 3888106 - 3886922 - | N-acetylglucosamine 6-phosphate deacetylase TERM 4206 3887919 - 3887895 - G 100 -7.8 -5.52384 | overlap 3887896 3887897 TGGGTATCAAAAAAA CCGGGGGCAA GGTAA TTGCCCCCCA AATCTATGGTGCGGT TERM 4207 3887918 - 3887896 - G 77 -9.1 -3.90707 | overlap 3887895 3887897 GGGTATCAAAAAAAC CGGGGGCAA GGTAA TTGCCCCCC AAATCTATGGTGCGG TERM 4208 3887917 - 3887897 - G 79 -12.6 -2.93701 | overlap 3887896 3887895 GGTATCAAAAAAACC GGGGGCAA GGTAA TTGCCCCC CAAATCTATGGTGCG Sde_3041 3889158 - 3888106 - | glutamine-fructose-6-phosphate transaminase (isomerizing) TERM 4209 3889277 - 3889262 - R 71 -9 -3.29096 | CGGAGTAACGATCAA TCGAGG CACA CCTCGA GACAACGTTGTCATT Sde_3042 3890357 - 3889329 - | LacI family transcription regulator TERM 4210 3890873 - 3890883 + G 73 -2.4 -5.12617 | opp_overlap 3890873 CGGCATAAACAACGA CCCC AAA GGTG TTTTTTCGGTAGTTG Sde_3043 3890673 - 3891482 + | hypothetical protein Sde_3044 3892138 - 3891557 - | hypothetical protein TERM 4211 3893913 - 3893901 - g 73 -4.1 -4.89393 | CAAAGGCGACAAAAA CGACT CTA AATCG CTAATGAAACAAGCC Sde_3045 3892186 - 3894822 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4212 3895502 - 3895489 - g 78 -6.7 -4.66163 | AGTGGCAGCGAAAAA GCACT TACT AGTGC AGTTAAAAGCGATAC TERM 4213 3896383 - 3896367 - g 73 -2.1 -5.22943 | overlap 3896358 3896369 AGTAAACGCAAAAAA CCCTGCG ATG CCCAGCG TAGAGCAGCTATACC Sde_3046 3894877 - 3897909 + | hypothetical protein Sde_3047 3899465 - 3897951 - | serine/threonine protein kinase TERM 4214 3898261 - 3898251 - G 76 -4.6 -4.93365 | GGGCATAAGTAAAAA CACC AAC GGCG TAAACACAAGCAACT Sde_3048 3899967 - 3899455 - | hypothetical protein TERM 4215 3899544 - 3899570 + g 78 -6.5 -4.62783 | opp_overlap 3899545, overlap 3899545 CAGGTATGGCAACGG AGTGCAGTGCC CCGCC GGCGCTGTACA TTTTTAAGGTGGCTA TERM 4216 3899545 - 3899569 + g 73 -10 -3.37188 | opp_overlap 3899545, overlap 3899544 AGGTATGGCAACGGA GTGCAGTGCC CCGCC GGCGCTGTAC ATTTTTAAGGTGGCT TERM 4217 3899612 - 3899594 - G 75 -6.7 -4.54727 | gap 1, overlap 3899596 3899606 GTGGCTAAACCAAAA GC-GCGCT CAAT AGCGCCGC GCGATACCTCAATAT TERM 4218 3900423 - 3900409 - g 70 -10 -2.98472 | opp_overlap 3900408 3900409, overlap 3900408 3900406 CCGCAGTAAAAACAC CGCTCT TGC AGAGCG CTTACTCGATATAAA Sde_3049 3900140 - 3900952 + | molybdopterin biosynthesis MoeB protein TERM 4219 3901072 - 3901043 - g 74 -3.5 -4.99947 | gap 1, overlap 3901048 CTCAAGCAAATAAAA GCCAATGCTACGGT ACT ACCGCA-CAGGGGC GCATCGAACACAGCG Sde_3050 3900973 - 3901656 + | hypothetical protein Sde_3051 3901779 - 3902198 + | hypothetical protein TERM 4220 3904840 - 3904818 - g 74 -3.4 -5.00616 | overlap 3904824 GTTTTTCTTAAAAAA CGTAAACAAT TTT ATTGTAGACG GTGTACTAACCGAAA Sde_3052 3902677 - 3905421 + | TonB-dependent receptor TERM 4221 3905437 - 3905457 + F 100 -10.4 -5.63517 | CCCCGTAGCAGTGTT GGGCCATC TTTAT GGTGGCCC TTTTTTCTTTCAAAA TERM 4222 3906051 - 3906031 - g 82 -2.6 -5.626 | CACTGCACAAAAAAA TTAAACGT TACCC ACGTTAAA GCCACTGTAGAAAAT TERM 4223 3906503 - 3906521 + G 83 -6.6 -5.00884 | opp_overlap 3906497 AAAAAAACTGCGTAG CCATTGGC CTA GCCGCTGG TTTTTTAGAGCCACT Sde_3053 3905506 - 3907032 + | tryptophan halogenase, putative Sde_3054 3907035 - 3907745 + | hypothetical protein Sde_3055 3908635 - 3907844 - | putative deoxyribonuclease TERM 4224 3909147 - 3909123 - g 74 -7.1 -4.20367 | opp_overlap 3909123 GGGCCTAACAAAGAA GCCATTGCCCA GCG TGCGCAACAGC GTTTAATCGAGCTAT Sde_3056 3908841 - 3909335 + | hypothetical protein Sde_3057 3910276 - 3909428 - | branched chain amino acid aminotransferase Sde_3058 3911111 - 3910314 - | hypothetical protein TERM 4225 3911101 - 3911120 + g 76 -7.8 -4.19649 | TCTATCCAGACTATT GGGGTGCT CATA AGCGCTCC TTCTTATTTGCTTTT TERM 4226 3911490 - 3911479 - g 74 -3.6 -4.93454 | overlap 3911480 TAAACAAATAGAAAA CGGC CATT ACCG CCCCGGCGATAAGCT TERM 4227 3912517 - 3912501 - g 87 -11.5 -3.86897 | CTCACTTTTTAGAAA GCGGCCG ATA CGACCGC TACCTGCGCCAAGCT Sde_3059 3911426 - 3912847 + | GntR family transcriptional regulator TERM 4228 3912913 - 3912886 - f 100 -10.6 -4.37886 | overlap 3912888 TTATGTTGCACAAAA TATGGTGCCGAA AATA CTCGGCACCATT ACAATGCGCGCCCCA TERM 4229 3912911 - 3912888 - f 100 -13.2 -3.79687 | overlap 3912886 ATGTTGCACAAAATA TGGTGCCGAA AATA CTCGGCACCA TTACAATGCGCGCCC Sde_3060 3912970 - 3913776 + | hypothetical protein TERM 4230 3915400 - 3915386 - g 80 -10 -3.93782 | overlap 3915394 3915395 TTACGTAATAGTAAA TGGCGA AAC TCGCCA AGCGGAAGATATGGA TERM 4231 3915831 - 3915813 - g 71 -9.6 -3.1876 | overlap 3915816 AATTGGAGCTATCAA CAAGTTCG CGA CGAACTCG CCAGCACCAATCAAG Sde_3061 3914031 - 3916334 + | xylanase/chitin deacetylase-like TERM 4232 3916399 - 3916380 - T 74 -9.2 -3.38361 | opp_overlap 3916380 AAATGTTAATATTAA GGGCGGTT TAAA ACCCGCCC TTTTTAATTCTGGGA TERM 4233 3916380 - 3916399 + T 100 -9.2 -4.93365 | opp_overlap 3916380 AAATGTTAATATTAA GGGCGGTT TAAA ACCCGCCC TTTTTAATTCTGGGA Sde_3062 3916979 - 3916503 - | hypothetical protein TERM 4234 3917085 - 3917049 - R 77 -8.2 -3.94402 | opp_overlap 3917053 3917055 3917055, overlap 3917052 ATAAGTGCCAAATAA TAATCACTAGCTACTA GTAGT TAGTTACTAGCGATTA GCAATTACTAACTAA Sde_3063 3918067 - 3917093 - | secretion protein HlyD TERM 4235 3917367 - 3917347 - G 93 -9.7 -4.56702 | TGCCAATTAAATAAA CGCCGTTAG GTA CCAACGACG CTATACACCCTTCAA Sde_3064 3919136 - 3918327 - | transglutaminase-like TERM 4236 3918794 - 3918778 - G 70 -5.1 -4.44461 | opp_overlap 3918769 3918780, overlap 3918769 3918768 AATAAGGTGAGAAAA GTGGATA CCT TATCCTC TTGCCCCACTTGCCT Sde_3065 3919784 - 3919239 - | hypothetical protein Sde_3066 3920229 - 3919843 - | transglutaminase-like Sde_3067 3920669 - 3920325 - | hypothetical protein TERM 4237 3921208 - 3921239 + r 78 -7.5 -4.56597 | opp_overlap 3921207, overlap 3921211 TAGGACATTAAGCAG TATGTGGCCATT-CG ATTA CGCAATGGCCAC-TA TTTTTACCACGCCCC TERM 4238 3921211 - 3921237 + r 95 -11.7 -3.90048 | gap 1, opp_overlap 3921207, overlap 3921208 GACATTAAGCAGTAT GTGGCCATT-CG ATTA CGCAATGGCCAC TATTTTTACCACGCC TERM 4239 3921324 - 3921334 + r 75 -8.2 -3.83026 | TAAGCTTCTTTTGGG GCGC ATA GCGC TTTGCTATAAAAGCC Sde_3068 3921841 - 3921308 - | hypothetical protein TERM 4240 3921734 - 3921756 + g 74 -5.5 -4.56597 | gap 1 GCTGGTACGGCCCCT GCGCG-GCAA TTTA TCGCTCGCGC TTTTTGGAAAAACAA Sde_3069 3922267 - 3921914 - | response regulator receiver domain-containing protein Sde_3070 3922703 - 3922332 - | hypothetical protein Sde_3071 3923417 - 3922794 - | MCP methyltransferase, CheR-type TERM 4241 3923361 - 3923349 - G 83 -9.1 -4.29106 | opp_overlap 3923345 3923353, overlap 3923351 CGTTACAGCAATAAA CACCG GCA CGGTG CCTATTGGGTCTATA TERM 4242 3923556 - 3923540 - R 81 -5.1 -5.13473 | opp_overlap 3923542, overlap 3923542 ATTATACGCAAAAAA CAGCACT TAA AGCGCTA ATATCGTCAAAGGCG Sde_3072 3924410 - 3923691 - | methyl-accepting chemotaxis sensory transducer TERM 4243 3924167 - 3924180 + g 81 -5.3 -5.17353 | opp_overlap 3924167 ACTCGTAATTAATAT TGATG TCGC CATCA TTTTTTACTACATCT Sde_3073 3926745 - 3925057 - | CheW protein TERM 4244 3926070 - 3926092 + g 79 -2.1 -5.55664 | gap 1, overlap 3926071 3926072 3926073 CCTGTTTTATCTTCT TAT-CGATTG CTTT CAATCGGGTA TTTTTTTCCTGCTGC TERM 4245 3926618 - 3926632 + g 81 -3.5 -5.41746 | opp_overlap 3926601, overlap 3926601 3926604 CGCTCGTGAAAATGT GCGAG CCTTT CTTGC TTTTTTTCGGCCATT Sde_3074 3926877 - 3927854 + | CheW protein TERM 4246 3927833 - 3927857 + T 73 -3.6 -5.03713 | gap 1, overlap 3927834 TCCCGGCGTGGGGCT G-GCTAAGCAA TTAT TTGCCTAGCTC TTTTATTTAATTCTT TERM 4247 3927834 - 3927855 + T 73 -7.3 -4.11369 | overlap 3927833 CCCGGCGTGGGGCTG GCTAAGCAA TTAT TTGCCTAGC TCTTTTATTTAATTC TERM 4248 3928016 - 3928028 + T 84 -6.3 -4.91987 | opp_overlap 3928016 CGGACCTTTTCATAA CATGA CTG TCATG TTTTCTTCTTGAATT Sde_3075 3928651 - 3928010 - | response regulator receiver domain-containing protein TERM 4249 3928408 - 3928421 + g 81 -5.3 -5.17353 | opp_overlap 3928408 ACTCGTAATTAATAT TGATG TCGC CATCA TTTTTTACTACATCT TERM 4250 3929055 - 3929067 + r 84 -6.3 -4.91987 | opp_overlap 3929055 AAAAGCAAAGCATAA CATGA CAG TCATG TTTTCTTGTTCAATT TERM 4251 3929230 - 3929242 + r 84 -6.3 -5.00196 | opp_overlap 3929230 CGGACCTTTTCATAA CATGA CTG TCATG TTTTCTTGTTTGAAG Sde_3076 3929803 - 3929363 - | hypothetical protein TERM 4252 3929885 - 3929873 - H 73 -9.1 -3.53224 | GAGTTTTGCGGTAAA GTGGC GAA GCCAC CGCAAAACGGAGCGT TERM 4253 3929922 - 3929910 - H 75 -3.4 -5.15634 | GAGCGTAGCAAAAAA TGTC CTGTT GACA AACTTGATACTTATG TERM 4254 3930362 - 3930338 - g 70 -2.1 -5.03314 | gap 1, opp_overlap 3930338 TTGACTCGGAAAAAA TCGCACGCAT TATGAG AGGCG-GCGA TTTCCCTCTCGCCTA Sde_3077 3929935 - 3931068 + | response regulator receiver domain-containing protein Sde_3078 3931973 - 3931572 - | methyl-accepting chemotaxis sensory transducer Sde_3079 3932821 - 3932123 - | methyl-accepting chemotaxis sensory transducer Sde_3080 3934179 - 3933133 - | serine/threonine protein kinase Sde_3081 3934630 - 3934172 - | hypothetical protein TERM 4255 3934355 - 3934341 - G 78 -5 -4.91511 | ATCTGACCACAAAAA TATGCC AAT AGCATA CTGCTTGCAAAAGCC Sde_3082 3935419 - 3934760 - | PAS/PAC sensor signal transduction histidine kinase TERM 4256 3935075 - 3935059 - G 76 -5.1 -4.86731 | overlap 3935060 CGCCTCGAAATAAAA CTTGCCC CTT AGGCAAA AGACCTCCAAATTTA Sde_3083 3936453 - 3935554 - | hypothetical protein Sde_3084 3937481 - 3937161 - | hypothetical protein Sde_3085 3938120 - 3937641 - | response regulator receiver domain-containing protein TERM 4257 3938163 - 3938220 + r 78 -8.8 -3.85817 | gap 2, overlap 3938159 GCCATATGCGGCAAA CTTTTTGTTGATTGTTTGTGC--TAGCG TTAG CGTTAAAGCACAAACGAGCAACGGAAAG TTTGTCCAGCCAGCT TERM 4258 3938881 - 3938893 + r 70 -7.7 -3.67918 | opp_overlap 3938877 AGCTAAGCCAATACT CGCAA AAA TTGCG TTTAGCCTATTACTT TERM 4259 3939050 - 3939036 - R 72 -7.8 -3.82592 | ATAACGCCACAATAA CCGAGC GGA GCTCAG CGTGGTATTGTGAGC Sde_3086 3939387 - 3939112 - | histidine kinase Sde_3087 3940478 - 3940143 - | PAS/PAC sensor hybrid histidine kinase Sde_3088 3941132 - 3940593 - | hypothetical protein TERM 4260 3941173 - 3941161 - R 73 -9.1 -3.53343 | AAGTTTTGCGGTAAA GTGGC GAA GCCAC CGCAAAACGGAACGA TERM 4261 3941210 - 3941198 - R 79 -3.4 -5.32565 | opp_overlap 3941198 GAACGAAGCAAAAAA TGTC CTATT GACA GTTTTGTTAGTTCTT Sde_3089 3941948 - 3941226 - | hypothetical protein TERM 4262 3942011 - 3941988 - R 100 -14.6 -3.63569 | gap 1, opp_overlap 3941997 3942007 CTAACGCCTCAATAA CCGG-CGCAGC TTT GCTGCGTCCGG CGCCGAAGGCGCGAA Sde_3090 3942432 - 3942040 - | hypothetical protein TERM 4263 3942513 - 3942503 - R 76 -6.8 -4.56597 | GCTTTTGTGCAAAAA TGGC GTA GCCA TGCACAAAAGGCGCA Sde_3091 3942900 - 3942577 - | hypothetical protein TERM 4264 3943312 - 3943333 + r 73 -7.3 -4.11394 | CTACGAAAGCACGTT GTAATTGGC TTTA GCCTATTAC TTTTACAAATGGAAT TERM 4265 3943800 - 3943761 - R 70 -9.6 -2.80492 | overlap 3943758 GACTAGCACCAACGA GGTTTAACTAATTTGT GTGTTTTT ACAATTTAGTTAAACC GGATTAAAACCGCCA TERM 4266 3943839 - 3943860 + r 78 -7.3 -4.42653 | CTACGAAAGCACGTT GTAATTGGC TTTA GCCTATTAC TTTTCTAAATGAAAT TERM 4267 3944023 - 3944035 + r 70 -7.7 -3.72893 | ATCCCCAATACACCC CCAGT AAG ACTGG TTTGCTCGGCAGCTA TERM 4268 3944197 - 3944217 + r 76 -2.5 -5.34381 | opp_overlap 3944201 TTTTGTTTAATGCAG CCAACCG CCTGTAA CGGTTTG TTTTTATTTAACTTT Sde_3092 3945586 - 3944546 - | hypothetical protein Sde_3093 3946989 - 3945583 - | trypsin-like serine proteases typically periplasmic TERM 4269 3946479 - 3946500 + g 75 -10.1 -3.55444 | GCGCGGGGGGTACGG CGCTTAGCG CTAG CGCTGGGCG TTTAACCGGTACCGA Sde_3094 3947745 - 3948545 + | GntR family transcriptional regulator TERM 4270 3948595 - 3948579 - T 100 -12.3 -5.36441 | opp_overlap 3948579 CCTGCACATAAAAAA GCCCCAA TGT TTGGGGC TTTTAATTACAATCA TERM 4271 3948579 - 3948595 + T 100 -12.3 -4.42238 | opp_overlap 3948579 CCTGCACATAAAAAA GCCCCAA TGT TTGGGGC TTTTAATTACAATCA Sde_3095 3951917 - 3948636 - | AcrB/AcrD/AcrF family protein TERM 4272 3949325 - 3949339 + g 81 -3.6 -5.28176 | TTAGCGCATCGGCTA CTTTAA ACG TTGAAG TTTTTTCTGCATCGA Sde_3096 3953113 - 3951917 - | membrane-fusion protein TERM 4273 3953081 - 3953051 - G 71 -9.8 -3.16981 | CATAATCAGAGTGAA TACAGCAGCTCCAC CAA GTAGAACCGCTATA GGCCGAAAAATTTGT Sde_3097 3954320 - 3953442 - | hypothetical protein TERM 4274 3953558 - 3953570 + g 72 -9.1 -3.63559 | opp_overlap 3953557 3953555 3953558, overlap 3953555 ATGCGGTAATAATAT GCTGG TCG CCAGC TATTTGATTGTTGGT Sde_3098 3956878 - 3954317 - | hypothetical protein Sde_3099 3960384 - 3957034 - | transglutaminase-like domain-containing protein TERM 4275 3957834 - 3957818 - G 78 -6.5 -4.56597 | GGGTTTTGCCAAAAA CGCGC GGTTAAG GCGCG AATTAACAACATTTG TERM 4276 3958447 - 3958435 - G 72 -10.5 -2.86049 | overlap 3958434 CAATAATTTAACAAG GCGCG AAT CGCGC GGTGGCTCGTAGCCT TERM 4277 3958601 - 3958622 + g 73 -4.3 -4.74598 | opp_overlap 3958594 ACACATAACGCGGTG CGCACAACG GGTA CGGTTTGCG TTTGTTTTGCGTTTG TERM 4278 3959218 - 3959201 - G 74 -5.5 -4.67048 | gap 1, opp_overlap 3959202, overlap 3959202 3959205 TTACGCCAAAATAAA CCCAGCGC CCA GCGC-GGA ATTTCTTCGCCCGGG TERM 4279 3959907 - 3959921 + g 73 -2.1 -5.13521 | CCGGCTCTAGGCGGA TGGTG TAATC CACTA TTTTTTGAATGCTTT TERM 4280 3960444 - 3960418 - R 100 -14.4 -4.04149 | overlap 3960420 TAACGAGAGTAGAAA TAGCCCGCACAC TTG GCGTGCGGGCGA AATGGGTATTAATGG TERM 4281 3960442 - 3960420 - R 100 -17 -3.60505 | overlap 3960418 ACGAGAGTAGAAATA GCCCGCACAC TTG GCGTGCGGGC GAAATGGGTATTAAT Sde_3100 3961422 - 3960484 - | hypothetical protein Sde_3101 3962871 - 3961426 - | hypothetical protein TERM 4282 3963309 - 3963277 - R 100 -12.1 -3.97511 | opp_overlap 3963269 3963307 TACGGAACACAATAA TGCCATGCCACAC TAAAAGC GTGTGGTATGGCA CATGGCGCTTTACTG TERM 4283 3963334 - 3963344 + r 75 -8.2 -3.89346 | TTACTGAGTGAGTTA GGCG CTG CGCC TTTATACACTGCGAC Sde_3102 3964410 - 3963364 - | dethiobiotin synthase TERM 4284 3964184 - 3964168 - G 70 -9.5 -3.00918 | opp_overlap 3964180, overlap 3964167 3964170 AGTGAGAGTAGAAAT CATTACC ACT GGTAATG GGTGCAAACGCATTA TERM 4285 3964239 - 3964214 - G 74 -5.5 -4.63486 | opp_overlap 3964214 AGGTTTTTAAGAAAA GAAATACCG TTCATGCG CGGCATTTC TATATCCAGTGTTAG Sde_3103 3965078 - 3964422 - | CheD, stimulates methylation of MCP proteins Sde_3104 3965938 - 3965081 - | MCP methyltransferase, CheR-type TERM 4286 3965991 - 3965969 - R 100 -9.1 -4.63044 | overlap 3965971 ATTTATACAAACAAA GAGGCGATG AGTTG CATCGCCAC ACACATTTAAGCGTT TERM 4287 3965989 - 3965971 - R 89 -10.3 -3.91983 | overlap 3965969 TTATACAAACAAAGA GGCGATG AGTTG CATCGCC ACACACATTTAAGCG Sde_3105 3968315 - 3966012 - | putative methyl-accepting chemotaxis sensory transducer Sde_3106 3968923 - 3968360 - | biotin synthase TERM 4288 3968583 - 3968595 + g 78 -4.8 -5.0925 | ATGCCAACCGTACGG CTGC CTTGT GCAG TTTTTACTTTTAAAA Sde_3107 3971360 - 3968940 - | putative CheA signal transduction histidine kinases TERM 4289 3969834 - 3969856 + g 85 -6.2 -5.09895 | overlap 3969836 CACAGCATTGCGCAC TAGGTGAACC AGT GGGTCACCAA TTTTTTCCATAACTG Sde_3108 3971732 - 3971370 - | response regulator receiver domain-containing protein Sde_3109 3972039 - 3971743 - | hypothetical protein Sde_3110 3973505 - 3972312 - | response regulator receiver domain-containing protein TERM 4290 3974305 - 3974276 - g 77 -3.5 -5.19251 | gap 1 GAACACCAAGAAAAA GCGGATGG-CACGC AAG ACGTATCCCTCCAC CAATTTGCAAAAGAA Sde_3111 3973850 - 3975043 + | putative methyl-accepting chemotaxis sensory transducer TERM 4291 3976737 - 3976727 - g 78 -5.4 -4.77986 | overlap 3976728 CCAAATACTTAAAAA CGTT GCC AACG GAAACTTCGACGAAG TERM 4292 3976898 - 3976883 - g 78 -6.1 -4.60255 | overlap 3976872 3976887 3976893 ACAAGCGTCCAAAAA CGCAG AGCAAG CTGCG CACGATGCTCAAGCG TERM 4293 3978027 - 3978016 - g 79 -2.2 -5.5454 | CCAAAGAAATAAAAA CGCT TATT AACG ATAGCGCCGCACGTG Sde_3112 3975225 - 3978314 + | putative methyl-accepting chemotaxis sensory transducer Sde_3113 3979028 - 3978402 - | hypothetical protein Sde_3114 3979206 - 3980546 + | metal dependent phosphohydrolase TERM 4294 3981342 - 3981353 + G 72 -5.8 -4.5477 | opp_overlap 3981341 CGCACACCACTTAAC GCCA TTAT TGGC TTTTCTGATGTGTTA Sde_3115 3980550 - 3981995 + | PAS/PAC sensor signal transduction histidine kinase TERM 4295 3982012 - 3982031 + T 100 -9.2 -5.2197 | opp_overlap 3982013, overlap 3982013 GCTTATATACAAAAA ACCCAGCC AACC GGCTGGGC TTTTTGATTTTTCTG TERM 4296 3982013 - 3982030 + T 100 -12.7 -3.70742 | opp_overlap 3982013, overlap 3982012 CTTATATACAAAAAA CCCAGCC AACC GGCTGGG CTTTTTGATTTTTCT TERM 4297 3982030 - 3982013 - T 100 -12.7 -5.4251 | opp_overlap 3982013 3982012 CTTATATACAAAAAA CCCAGCC AACC GGCTGGG CTTTTTGATTTTTCT Sde_3116 3982343 - 3982101 - | thiolase TERM 4298 3982969 - 3982955 - g 73 -4.3 -4.87807 | overlap 3982944 GTAAGATATTAAAAA TATCG CGCTT CGATA CTAAATTCACCATCA Sde_3117 3982690 - 3982989 + | anti-anti-sigma regulatory factor Sde_3118 3983005 - 3984696 + | response regulator receiver domain-containing protein TERM 4299 3985613 - 3985596 - g 70 -2 -4.91511 | gap 1, overlap 3985599 ACCTCACCAGAAAAA CATCGCT ACCTA AGCG-TG GCTCGAAATAGCGCA TERM 4300 3986134 - 3986152 + G 86 -5.3 -5.61596 | opp_overlap 3986134 TCGAAAGTTACGAAG GCAAAGG CAGCA CTTTTGC TTTTTTTATCGAAGT TERM 4301 3986457 - 3986438 - g 78 -6.4 -4.67982 | opp_overlap 3986433 3986439, overlap 3986433 3986439 CCGTATGCAACAAAA CGATGAGC GCGT GCCCATCA TTATGCTTTCTAACA TERM 4302 3987192 - 3987182 - g 72 -8.2 -3.69663 | overlap 3987183 ACTAGTAGGCAACAA CGCG CAG CGCG CCTACAAATTAATAT Sde_3119 3984897 - 3987482 + | Signal transduction histidine kinase-like TERM 4303 3988099 - 3988082 - g 77 -3.5 -5.14682 | gap 1 CTATAACAAACAAAA CAAC-ACT AAA AGTAGTTG GGGCTTACTCTCCAC TERM 4304 3988327 - 3988357 + G 72 -9.1 -3.57523 | gap 1, opp_overlap 3988333, overlap 3988323 3988327 CCAAGCAGGGGTGGG C-CAATAGCGCTGA AGAT TCTGCGCTATTGCG TATTATTCTCTTGCT TERM 4305 3988637 - 3988623 - g 73 -4.2 -4.8083 | GAAGACCATCAAAAA GCAGTT ATA AACAGC CTTAAAAATTACGGT TERM 4306 3990560 - 3990542 - g 100 -9.5 -4.88222 | AGTAAAAGCCAAAAA CGCGGCC GAACT AGCCGCG CGAACCAAAAGTGAA TERM 4307 3990974 - 3990957 - g 74 -5.6 -4.72029 | GGCAACGCAATAAAA TTCACC CAAAAT GGTGAA GTAACAGTCACTGCG TERM 4308 3991721 - 3991711 - g 76 -8.2 -4.01853 | opp_overlap 3991719 TAACATTACCACAAA GCCC ACA GGGC GAAGCATCGCAATTT TERM 4309 3992045 - 3992034 - g 76 -2.2 -5.38054 | GGCGATAAAGAAAAA TGCA TTGC CGCA GGTATGGATGATTAC Sde_3120 3987552 - 3992513 + | putative periplasmic ligand-binding sensor protein TERM 4310 3992514 - 3992545 + T 83 -11.7 -2.94099 | opp_overlap 3992520, overlap 3992520 AAATATTTGGCGTAA AAAAAAGCCGCTC CCGAAA GAGCGGCTTTTTG TATGTACTAACGCGA TERM 4311 3992520 - 3992539 + T 100 -10.7 -5.05601 | opp_overlap 3992520, overlap 3992514 TTGGCGTAAAAAAAA GCCGCTC CCGAAA GAGCGGC TTTTTGTATGTACTA TERM 4312 3992539 - 3992520 - T 100 -11.4 -5.75342 | opp_overlap 3992520 3992514 TTGGCGTAAAAAAAA GCCGCTCC CGAA AGAGCGGC TTTTTGTATGTACTA Sde_3121 3994790 - 3992562 - | glucan endo-1,3-beta-D-glucosidase TERM 4313 3993641 - 3993664 + g 77 -8.8 -3.86897 | TTGCAGCAAGAGTTA CGCCGGCGTT GGTA AATGCAGGCG TTTGTAAACCGTCAC TERM 4314 3994769 - 3994781 + g 79 -2.7 -5.43514 | CCACCAGCGAAAGTT CTAGA AGC TTTAG TTTTTTCATTATTTT TERM 4315 3995001 - 3994950 - H 85 -9.4 -4.2018 | AAAGCTGTAAAAGAA GCCCCTTACCATTTAGCATTTGCC TTTT AGCAATGACCAACCGGCAAGGGGC ACAATTACTCTTGCG TERM 4316 3995045 - 3995035 - H 71 -6.8 -4.0942 | opp_overlap 3995039, overlap 3995038 TAGCGACTACATAAA GCAG TCA CTGC GCCTCATTGACACCC TERM 4317 3996011 - 3996023 + G 70 -9.1 -3.39058 | opp_overlap 3996011, overlap 3996009 CGGCGGGGGCAATTA TCGCC GGC GGCGA TGTTGTGTCTACTAT TERM 4318 3996452 - 3996441 - g 83 -4.4 -5.27923 | TAAGGGCATAAAAAA GCTT TGGA AAGC CGAGCTATATCAAGC Sde_3122 3995731 - 3997275 + | phosphate permease TERM 4319 3997319 - 3997301 - T 83 -11.6 -2.91912 | opp_overlap 3997301 CTATTCATCTATACA CCCCCGGC AAT GCTGGGGG TTTTAGTTTCTGCAG TERM 4320 3997301 - 3997319 + T 100 -13.8 -4.61873 | opp_overlap 3997301 CTATTCATCTATACA CCCCCGGC AAT GCTGGGGG TTTTAGTTTCTGCAG Sde_3123 3997636 - 3997367 - | acylphosphatase-like protein TERM 4321 3998700 - 3998727 + G 74 -5.4 -4.72272 | overlap 3998693 3998706 AGTGCGGTGGCGAAG CGCGTTGCTCAG ACCG CTGGGCTTCGTG TTTTTGGTGGGCGGA TERM 4322 3998969 - 3998981 + G 74 -5.5 -4.71426 | overlap 3998955 3998965 GGCGGCCAGCACGAC GGTAG CCG CTGCC TTTTGTTAATAAACC Sde_3124 3997733 - 3999214 + | hypothetical protein Sde_3125 3999254 - 4000036 + | endonuclease V Sde_3126 4000678 - 4000049 - | hypothetical protein TERM 4323 4000585 - 4000604 + g 84 -7.8 -4.75472 | opp_overlap 4000585 CTACCGGATAAAGCA GCGCCGTA AACG TACTGCGC TTTTCTTCGTGTACA TERM 4324 4000764 - 4000751 - R 100 -8.1 -5.65177 | opp_overlap 4000751 ACAGGCATAAAAAAA GGGCT AAAT AGCCC TTTTTAAATAAGTCT TERM 4325 4000751 - 4000764 + r 86 -8.1 -4.67755 | opp_overlap 4000751 ACAGGCATAAAAAAA GGGCT AAAT AGCCC TTTTTAAATAAGTCT Sde_3127 4001475 - 4000789 - | GntR family transcriptional regulator TERM 4326 4001262 - 4001250 - G 75 -6.2 -4.37711 | GCACCAAAGGCAAAA CGCG CATAC CGCG ACGCGGAACCAGCTG Sde_3128 4002599 - 4002940 + | hypothetical protein TERM 4327 4003057 - 4003047 - g 77 -6.8 -4.39426 | overlap 4003048 4003050 TACAGCGCGATAAAA CCAC CGT GTGG AACGGCATTCGCAAC Sde_3129 4002980 - 4003432 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 4328 4003502 - 4003483 - T 100 -10 -5.4505 | opp_overlap 4003483 GCGGGCAATAAAAAA GGCAGCCA CGAA TGACTGCC TTTCCTGTGAGTATC TERM 4329 4003483 - 4003502 + T 72 -7.8 -3.85539 | opp_overlap 4003483 GCGGGCAATAAAAAA GGCAGCCA CGAA TGACTGCC TTTCCTGTGAGTATC Sde_3130 4004510 - 4003773 - | hypothetical protein TERM 4330 4004578 - 4004607 + r 70 -8 -3.61089 | overlap 4004572 GCATTTGAGTTTTTG GGTGCTGAAA ATGTTTTTTA TTTCAGCACC TTATGGTTATTAGAC TERM 4331 4004724 - 4004711 - R 71 -4.5 -4.73094 | AATATCAACATAAAA TGCCG TTTT CAGCA GATATTTAAGCGGTA Sde_3131 4005036 - 4004860 - | ribosomal protein L13 TERM 4332 4005111 - 4005142 + r 100 -14.6 -2.77899 | opp_overlap 4005116, overlap 4005116 ACTGCACTTAAAAAT AAAAAGGGCTGTCA ATAA TGACAGCCCTTTTA TACTTCGTCGACCCA TERM 4333 4005137 - 4005116 - R 100 -14.5 -5.63236 | opp_overlap 4005111 4005116 ACTTAAAAATAAAAA GGGCTGTCA ATAA TGACAGCCC TTTTATACTTCGTCG TERM 4334 4005116 - 4005137 + r 100 -14.5 -4.56607 | opp_overlap 4005116, overlap 4005111 ACTTAAAAATAAAAA GGGCTGTCA ATAA TGACAGCCC TTTTATACTTCGTCG Sde_3132 4006970 - 4005201 - | acyl-CoA dehydrogenase family protein TERM 4335 4005984 - 4006000 + g 79 -10.1 -3.66646 | overlap 4005994 ATCTGGCATTTGCGG GCCGCTT GGC GAGCGGC TTTGAATGCGCTCTT Sde_3133 4008159 - 4007257 - | hypothetical protein TERM 4336 4007630 - 4007649 + g 82 -7.8 -4.68593 | overlap 4007629 GCTGGCGCCAGGGCC GCGCGC CTAACTGT GCGCGC TTTTTCAATGGTGGC TERM 4337 4007670 - 4007685 + g 72 -10.4 -2.91912 | overlap 4007684 CAATGGTGGCTTGCG GGTCGG CTGC CCGACC TATATCAATAGGTAC Sde_3134 4008740 - 4008477 - | PDZ/DHR/GLGF TERM 4338 4008848 - 4008831 - R 76 -7.7 -4.19953 | TAGCGAACCTCAAAA GCGGCAA GAAC TTGCCAC CACTAAGTAAAAACA TERM 4339 4008997 - 4009015 + r 100 -14.6 -3.61715 | TATATGCGGTTATTA GTTGCCGC TAG GCGGCAAC TTATTGGGCGAAATC Sde_3135 4009708 - 4009016 - | histidinol dehydrogenase Sde_3136 4009896 - 4011065 + | Signal transduction histidine kinase-like TERM 4340 4011131 - 4011113 - T 70 -5.2 -4.48221 | overlap 4011114 TAGTAATTGATAAAA GCCTACCT CGT AGGTGAGC GGCAACACACCTTGC Sde_3137 4012765 - 4011089 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Sde_3138 4013951 - 4012758 - | 8-amino-7-oxononanoate synthase TERM 4341 4013221 - 4013209 - G 72 -5.5 -4.42386 | CTGCCAGCCACAAAA GCACC AAA GGTAC CAAAAGCTTTGCCAA TERM 4342 4013436 - 4013453 + g 70 -2 -5.02439 | overlap 4013438 4013450 ATCCACAACAATTAA TTTACG TGCAGC CGTAGA TTTTTCTAATTGTGT TERM 4343 4014010 - 4013982 - R 80 -10.4 -3.41962 | gap 1, overlap 4013980 TTTAAGAAAGGAATA TTGAGCGAG-GCA TAAA CGCACTCGCTCAA ATAGCGCCAGCTAAA Sde_3139 4015109 - 4014057 - | biotin synthase Sde_3140 4015200 - 4016090 + | K+-dependent Na+/Ca+ exchanger related-protein TERM 4344 4017116 - 4017146 + G 86 -11.9 -3.56704 | gap 1, opp_overlap 4017123, overlap 4017111 GGCTGGCCCGCCGCT GGGAAGACCCTGCG TTCC CGCAGGC-CTTCCC TTGGTTTAATAGCGA Sde_3141 4016182 - 4017249 + | serine/threonine protein kinase Sde_3142 4018148 - 4017246 - | heat shock protein HtpX TERM 4345 4018023 - 4018013 - G 80 -6.8 -4.63089 | CACCGCAAAAAATAA GCAG TGC CTGC AGGTTTAAACCGCTG TERM 4346 4018642 - 4018631 - g 74 -3.6 -5.05228 | ATCAAACTAGAAAAA GCCG CAAC CGAC TACGTGGTGTTCAAC Sde_3143 4018313 - 4019422 + | hypothetical protein TERM 4347 4019473 - 4019431 - T 72 -7.2 -4.00532 | opp_overlap 4019437 4019440 4019441 4019444, overlap 4019426 4019437 4019440 TCGCTAAATACCAAA CACTAATTACTAATCGCTAA ACA CTAGTAATTAGCGATTAGTG CTTATCGATTATCAT TERM 4348 4019471 - 4019440 - T 70 -9.6 -2.87822 | opp_overlap 4019440 4019437 4019441 4019444, overlap 4019426 4019431 4019437 ACCAAACACTAATTA CTAATCGCTAAACA CTAG TAATTAGCGATTAG TGCTTATCGATTATC Sde_3144 4020339 - 4019497 - | putative methyltransferase TERM 4349 4021953 - 4021970 + G 70 -9.1 -3.33696 | gap 1, opp_overlap 4021947 4021949 4021950 GACAGCAAAGAGCGC GCGCGCGC AAT GCGC-CGC TTAATTGGCGAGGCC Sde_3145 4020495 - 4022480 + | ATPase Sde_3146 4022503 - 4022859 + | sigma-54 factor Sde_3147 4022877 - 4023461 + | phosphoheptose isomerase Sde_3148 4023463 - 4024041 + | putative lipoprotein TERM 4350 4024059 - 4024097 + T 72 -9.8 -2.73735 | gap 1, opp_overlap 4024066, overlap 4024066 CCGAAACCTACCCCA TA-AAAAAGCCCGCAAC CTAAAC GTCGCGGGCTTTTTGTA TCGTTAAACCTATTT TERM 4351 4024089 - 4024066 - T 100 -11.7 -5.26316 | opp_overlap 4024059 4024066 CTACCCCATAAAAAA GCCCGCAAC CTAAAC GTCGCGGGC TTTTTGTATCGTTAA TERM 4352 4024066 - 4024089 + T 100 -9.5 -5.04175 | opp_overlap 4024066, overlap 4024059 CTACCCCATAAAAAA GCCCGCAAC CTAAAC GTCGCGGGC TTTTTGTATCGTTAA Sde_3149 4025332 - 4024154 - | phosphoryl transfer system, HPr TERM 4353 4025665 - 4025632 - H 73 -3.9 -4.99435 | gap 1, overlap 4025635 GTTAACAACCAAAAA CTATGCCACACAACAC CTA ATGCTGTGCG-CAAAG TGAGACATGTGCCAC TERM 4354 4025769 - 4025757 - H 71 -2 -5.10029 | ATTAATTGGAAAAAA TAGA GAATT TCTA TGACAACTTTAATCG Sde_3150 4025769 - 4026359 + | divalent cation transporter TERM 4355 4026480 - 4026462 - f 82 -10.3 -3.58905 | ACGCGTTACACACAA CGGGTGA TACAT TCACCCG CTAACACTCCTTCGC Sde_3151 4026552 - 4028546 + | hypothetical protein TERM 4356 4028606 - 4028574 - T 100 -12.7 -5.2189 | opp_overlap 4028577 4028578, overlap 4028578 CTAAGCAGTAAAAAA GCAAGCGGGTTACCC ATT GGGTAACCCGCCTTT TTATTACCGCAGAAA TERM 4357 4028577 - 4028603 + T 100 -16.6 -5.06414 | opp_overlap 4028574 4028578, overlap 4028578 AGCAGTAAAAAAGCA AGCGGGTTACCC ATT GGGTAACCCGCC TTTTTATTACCGCAG TERM 4358 4028602 - 4028578 - T 100 -20.1 -3.96447 | opp_overlap 4028577 4028578, overlap 4028574 GCAGTAAAAAAGCAA GCGGGTTACCC ATT GGGTAACCCGC CTTTTTATTACCGCA TERM 4359 4028578 - 4028602 + T 100 -20.1 -3.63367 | opp_overlap 4028578 4028574, overlap 4028577 GCAGTAAAAAAGCAA GCGGGTTACCC ATT GGGTAACCCGC CTTTTTATTACCGCA Sde_3152 4029664 - 4028639 - | methionine sulfoxide reductase B TERM 4360 4030762 - 4030774 + G 85 -5.5 -5.40004 | opp_overlap 4030756 4030760 4030762 GGTAATAAACCAAGA GCTGG GGT TCAGC TTTTTTGATTTAGTG Sde_3153 4029857 - 4030951 + | AraC family transcriptional regulator Sde_3154 4031552 - 4030989 - | hypothetical protein TERM 4361 4031808 - 4031784 - R 100 -12.9 -4.96773 | opp_overlap 4031787 GGAATGAAAAAGAAA TAAGGCGCGCC AAA AACGCGCCTTA GATAGGCCTGTAATG Sde_3155 4033601 - 4031832 - | ribonuclease E and G TERM 4362 4033293 - 4033310 + g 72 -6.3 -4.2828 | ACCTATAAACTCGGG TACGGTA AACT TGCCGTA TTTTCGTAGGTAAGG Sde_3156 4033870 - 4033607 - | Maf-like protein Sde_3157 4035050 - 4034016 - | esterase/lipase-like TERM 4363 4034675 - 4034685 + g 71 -6.8 -4.16842 | overlap 4034672 CGGCTACCACCCCGC GCTC GGC GAGC TTTATTGCGAGTGGC TERM 4364 4035167 - 4035194 + r 90 -11.4 -3.70307 | opp_overlap 4035173, overlap 4035173 GTAAATTACAGGCAA AAAAAATGGCCC CGCA GGGCCATTTTTG TGTTTATTGGGTCAA TERM 4365 4035188 - 4035173 - R 100 -10.4 -5.83822 | opp_overlap 4035167 4035173 TACAGGCAAAAAAAA TGGCCC CGCA GGGCCA TTTTTGTGTTTATTG TERM 4366 4035173 - 4035188 + r 100 -10.4 -5.28414 | opp_overlap 4035173, overlap 4035167 TACAGGCAAAAAAAA TGGCCC CGCA GGGCCA TTTTTGTGTTTATTG Sde_3158 4035831 - 4035214 - | rod shape-determining protein MreC, subtype Sde_3159 4036504 - 4036103 - | ClpXP protease specificity-enhancing factor Sde_3160 4037176 - 4036541 - | glutamyl-tRNA(Gln) amidotransferase C subunit TERM 4367 4037266 - 4037242 - R 95 -7.8 -5.04868 | overlap 4037244 TTAAATCAAACAAAA TACGCCCTCA GCGAG TGAGGGCGCC ATCAACAACTACTTA TERM 4368 4037264 - 4037244 - R 100 -12.6 -4.12724 | overlap 4037242 AAATCAAACAAAATA CGCCCTCA GCGAG TGAGGGCG CCATCAACAACTACT Sde_3161 4039522 - 4037279 - | glutamyl-tRNA(Gln) amidotransferase A subunit TERM 4369 4038661 - 4038643 - G 77 -8.8 -3.84246 | opp_overlap 4038642 GTGTGAAGTACCAAA CCGGAGCA ATG TGCTCAGG AGTTTTAAGGCCGTT TERM 4370 4038795 - 4038842 + g 81 -5 -5.25906 | gap 1, opp_overlap 4038807, overlap 4038799 TCGTGCACGGTGTAG TAAGGATGGAAA-GGAATGCCGT CTA GCGGAATACCGTTTTCATCTTTG TTTTTCTTAATTTCT TERM 4371 4038799 - 4038838 + g 80 -5.8 -5.06961 | gap 1, opp_overlap 4038807, overlap 4038795 GCACGGTGTAGTAAG GATGGAAA-GGAATGCCGT CTA GCGGAATACCGTTTTCATC TTTGTTTTTCTTAAT Sde_3162 4040118 - 4039525 - | glutamyl-tRNA(Gln) amidotransferase B subunit TERM 4372 4040424 - 4040401 - R 100 -9.6 -4.87291 | opp_overlap 4040407 CATGGTAATGAAAAA CCCCAATCCT GACA AGGATTTGGG CGCACTGATAGCAAA TERM 4373 4040492 - 4040468 - R 100 -16.5 -4.85918 | overlap 4040482 4040483 CAGCACATAATAAAA CGCCCAAACCA CAA CGGTTTGGGCG CCAAAACAAAGCAAT Sde_3163 4040914 - 4040522 - | SSU ribosomal protein S9P rplM 4041356 - 4040928 - | 50S ribosomal protein L13 Sde_3165 4042686 - 4041505 - | hypothetical protein Sde_3166 4042913 - 4043371 + | hypothetical protein TERM 4374 4043457 - 4043434 - f 93 -12.5 -3.23216 | opp_overlap 4043434 CCTTAGCATCAGCAA CCTGCTACC CACCTT GGTAGCAGG TTTGACTTCACCGCC TERM 4375 4043434 - 4043457 + F 100 -12.5 -3.75153 | opp_overlap 4043434 CCTTAGCATCAGCAA CCTGCTACC CACCTT GGTAGCAGG TTTGACTTCACCGCC Sde_3167 4043505 - 4044659 + | DEAD/DEAH box helicase-like TERM 4376 4044742 - 4044721 - T 81 -9.5 -3.88641 | opp_overlap 4044721 AATAAACAGCAAGAA GTAGTAAGC ACCT GCCTACTAC TTTTCATCTTCCGCT TERM 4377 4044721 - 4044742 + T 78 -7.3 -4.43012 | opp_overlap 4044721 AATAAACAGCAAGAA GTAGTAAGC ACCT GCCTACTAC TTTTCATCTTCCGCT Sde_3168 4046046 - 4044739 - | histidinol dehydrogenase hisG 4046728 - 4046087 - | ATP phosphoribosyltransferase catalytic subunit TERM 4378 4046712 - 4046692 - G 78 -6.2 -4.63486 | gap 1, opp_overlap 4046693, overlap 4046694 AGGTTTCTAACAAAA TACGCCCTT TGGT AAGGGCG-A TGGTTAACTGAGACA TERM 4379 4046711 - 4046694 - G 87 -11.3 -3.93367 | opp_overlap 4046693, overlap 4046692 GTTTCTAACAAAATA CGCCCTT TGGT AAGGGCG ATGGTTAACTGAGAC Sde_3170 4048019 - 4046757 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4380 4048069 - 4048081 + r 70 -5.5 -4.57073 | ACAGCTTAATTACAC CGAGC TAT GCTTG TTTTTCGGCCCACTG Sde_3171 4048315 - 4048073 - | toluene-tolerance protein, putative Sde_3172 4049109 - 4048498 - | toluene-tolerance protein TERM 4381 4049969 - 4049959 - g 73 -4.6 -4.8622 | CGCGCCAAGCAAAAA GAGC TTA GCCC CGCAGAAATAGATCA TERM 4382 4050004 - 4049989 - g 71 -7.6 -3.83811 | overlap 4049995 GAAATAGATCAAGAA CAGGAA GACA TTCCTG AAATGTCACGGCCGC Sde_3173 4049491 - 4050486 + | putative sodium/calcium exchanger protein TERM 4383 4051392 - 4051382 - g 79 -4 -5.18866 | TGGAAACAAATAAAA TAAC CGC GTTA ATCGTAGAAGACGAG Sde_3174 4050496 - 4051467 + | arabinose-5-phosphate isomerase TERM 4384 4051956 - 4051944 - g 73 -10.5 -3.05596 | opp_overlap 4051935 CACTGGCGCAGTGAA CGCCG CGG CGGCG ATGGTGCCGTGCGCG Sde_3175 4051509 - 4052036 + | HAD family hydrolase YedP TERM 4385 4052446 - 4052432 - g 79 -4.2 -5.1925 | opp_overlap 4052442, overlap 4052434 GTAGAAGCTAAAAAA GGCAAG CTG CTTGGC GACGGTCAATCTATA TERM 4386 4052603 - 4052590 - g 72 -8.1 -3.67622 | overlap 4052586 GACTGTTAAAATCAA CTCCC CAAG GGGAG AAATGACAGGAGTCG TERM 4387 4052632 - 4052615 - g 73 -11.3 -2.74598 | overlap 4052612 4052607 GGAGAAATGACAGGA GTCGGCA TGGT TGCCGAC CTCGCAGAACGCAAA Sde_3176 4052102 - 4052692 + | hypothetical protein Sde_3177 4052679 - 4053218 + | alpha amylase domain-containing protein TERM 4388 4053473 - 4053493 + G 77 -11.1 -3.18571 | overlap 4053471 4053470 4053468 GCACGCGCTGGACTA GGCTACCTG CCG CAGGAAGCC TCTGTGTTTCGCAAG Sde_3178 4053233 - 4053958 + | PAS/PAC sensor signal transduction histidine kinase TERM 4389 4054416 - 4054406 - g 79 -4.6 -5.25699 | ACGACAGAAGAAAAA CCCG CAG CGGA AAAAGTAGAAGACAG TERM 4390 4055550 - 4055539 - g 70 -2.2 -4.99435 | gap 1 CGCAATAATCAAAAA GCTGG TAG CC-GC AGAAAATGCACGCAA Sde_3179 4054172 - 4055695 + | RNA polymerase factor sigma-54 TERM 4391 4055684 - 4055698 + F 80 -2.8 -5.47399 | TCAAACGAAAGAAAA CGCTTG GTT TAAGTG TTTTTTTAGCATTCC TERM 4392 4055810 - 4055799 - f 78 -5.8 -4.88405 | overlap 4055800 AATCTGCAAACAAAA GCCT GGCC AGGC CCGGTGCGCAAGCAC Sde_3180 4055864 - 4056316 + | response regulator receiver sensor signal transduction histidine kinase TERM 4393 4056345 - 4056362 + F 74 -6.9 -4.26019 | opp_overlap 4056345 TACTCACGGTATATA CGCTGCG CAAA CGCACCG TTTTGACTCTCCTTA Sde_3181 4056469 - 4057341 + | hypothetical protein Sde_3182 4057348 - 4057617 + | HNH nuclease TERM 4394 4057672 - 4057653 - f 72 -10 -2.74563 | gap 1 CCGATATCGCAAGTA CCGC-CGCT ATT AGCGAGCGG AGCGCTTGCGCAAGA Sde_3183 4057757 - 4059124 + | magnesium transporter Sde_3184 4059136 - 4059672 + | hypothetical protein TERM 4395 4059815 - 4059840 + T 100 -11.3 -4.87626 | opp_overlap 4059814 4059813 TATGTCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTCCCC TERM 4396 4059907 - 4059921 + T 91 -8.5 -4.69053 | TTGTCATCAGGCTGA GCGGG CAATA CCCGC TTTTATTAGCTACTC Sde_3185 4060506 - 4059931 - | protein-methionine-S-oxide reductase Sde_3186 4061309 - 4060518 - | carbon-nitrogen family hydrolase TERM 4397 4061085 - 4061071 - G 71 -7.1 -4.07687 | AGCGCTTCGCGAAAA GGCAG CGTAC CTGCC ACCAGCGCAATACTA Sde_3187 4065617 - 4061475 - | exonuclease VII, small subunit TERM 4398 4064091 - 4064101 + g 70 -2.4 -5.01042 | overlap 4064090 GGTTTCTGTTTGATC TCCC TCG GGGC TTTTTGCTTTAACTT TERM 4399 4064248 - 4064238 - G 76 -8.2 -4.11938 | opp_overlap 4064231 CAAATTAAGTACAAA GCCG TCG CGGC TATCAACATTTACGA TERM 4400 4065593 - 4065541 - G 74 -5.4 -4.57341 | opp_overlap 4065542, overlap 4065542 4065551 AACGTGCCCCAAAAA CGACGCACAACCATGCGCATAAAG TCTTG CTTTAAGCGCTTGGGCGATCGTCT CTCTTGTATTTCTGG TERM 4401 4065592 - 4065542 - G 70 -8.9 -3.33922 | opp_overlap 4065542, overlap 4065541 4065551 ACGTGCCCCAAAAAC GACGCACAACCATGCGCATAAAG TCTTG CTTTAAGCGCTTGGGCGATCGTC TCTCTTGTATTTCTG TERM 4402 4065583 - 4065551 - G 77 -10.6 -3.42726 | opp_overlap 4065542, overlap 4065542 4065541 AAAAACGACGCACAA CCATGCGCATAAAG TCTTG CTTTAAGCGCTTGG GCGATCGTCTCTCTT Sde_3188 4067212 - 4065734 - | RNAse G Sde_3189 4067894 - 4067262 - | putative inhibitor of septum formation Sde_3190 4068393 - 4067905 - | rod shape-determining protein MreD Sde_3191 4069166 - 4068402 - | rod shape-determining protein MreC TERM 4403 4069116 - 4069096 - G 73 -2.5 -5.12068 | gap 1, opp_overlap 4069100 4069102 GATACCCAATAAAAA GGCG-CAG CGACGT CCGTCGCC TGATTTTTGAGGGAC TERM 4404 4069327 - 4069342 + r 100 -11.8 -3.85698 | opp_overlap 4069327 TATATAAAGCCAAAA GGGCGC CACA GCGCCC TTTCTAACAAAACCC TERM 4405 4069342 - 4069327 - R 100 -11.8 -4.41177 | opp_overlap 4069327 TATATAAAGCCAAAA GGGCGC CACA GCGCCC TTTCTAACAAAACCC Sde_3192 4070399 - 4069368 - | rod shape-determining protein MreB TERM 4406 4069463 - 4069474 + g 71 -7.2 -4.1822 | opp_overlap 4069463 CTTCGGCCACAACCA CCGG CAAG CCGG TTTCTTCAGATAACA TERM 4407 4070484 - 4070472 - H 88 -6.9 -5.08824 | TCGGTACGTAAAAAA CGGGC AGA ACCCG CGTAAATTGGGGAAC TERM 4408 4070631 - 4070615 - g 78 -6.5 -4.72846 | TCAGACATTGAAAAA CTGGCCA AGC TCGCCAG GCTAGAAATAAACGA Sde_3193 4070591 - 4070872 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Sde_3194 4070979 - 4072433 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A TERM 4409 4073342 - 4073356 + G 71 -7 -4.16016 | CCAGAGCTACCGGAC GCACGC AAA GCGCGC TTTATTGAGCAGTAC gatB 4072445 - 4073887 + | aspartyl/glutamyl-tRNA amidotransferase subunit B Sde_3196 4073909 - 4074208 + | hypothetical protein TERM 4410 4074633 - 4074613 - g 76 -4.6 -5.03715 | overlap 4074614 ATTACGGGCAAAAAA GGCGAAGG TGAAC CCCTCGCG CAAATGATACCCCGT Sde_3197 4074208 - 4075014 + | putative sulfate uptake protein Sde_3198 4075087 - 4075479 + | hypothetical protein TERM 4411 4076479 - 4076467 - g 88 -5.5 -5.50499 | GCACATGCAAAAAAA GCGCT GCC AACGC GTGAAGATACGATTT Sde_3199 4075666 - 4076580 + | putative PAS/PAC sensor protein TERM 4412 4076663 - 4076630 - T 84 -11.2 -3.66727 | opp_overlap 4076631 4076633, overlap 4076631 4076633 GAAGTAGATACAGAA GTAGCAGCATAGAA CCAAAT TTCTATGCTGCTAT ATTAAACAAACGATT TERM 4413 4076662 - 4076631 - T 100 -14.7 -2.79313 | opp_overlap 4076631 4076633, overlap 4076630 4076633 AAGTAGATACAGAAG TAGCAGCATAGAA CCAAAT TTCTATGCTGCTA TATTAAACAAACGAT TERM 4414 4076631 - 4076662 + T 100 -14.7 -3.01791 | opp_overlap 4076631 4076630 4076633, overlap 4076633 AAGTAGATACAGAAG TAGCAGCATAGAA CCAAAT TTCTATGCTGCTA TATTAAACAAACGAT TERM 4415 4076633 - 4076660 + T 95 -12.9 -3.06696 | opp_overlap 4076631 4076630 4076633, overlap 4076631 GTAGATACAGAAGTA GCAGCATAGAA CCAAAT TTCTATGCTGC TATATTAAACAAACG TERM 4416 4076660 - 4076633 - T 95 -12.9 -2.93455 | opp_overlap 4076633 4076631, overlap 4076631 4076630 GTAGATACAGAAGTA GCAGCATAGAA CCAAAT TTCTATGCTGC TATATTAAACAAACG Sde_3200 4078285 - 4076735 - | dystroglycan-type cadherin-like TERM 4417 4078010 - 4078028 + g 72 -5.2 -4.58076 | CGCACGTGCCTGATT CGGCTTTA CTT TACGGCCG TTTTCTATGCCTTCT Sde_3201 4078396 - 4078809 + | hypothetical protein TERM 4418 4079009 - 4078994 - T 73 -5.4 -4.67353 | gap 1, opp_overlap 4078994 TTAGCCAGGTAAAAA CGCGCGA TAA TCGC-CG TTGCGTAACTCCACT Sde_3202 4079743 - 4078979 - | ATP-binding ABC transporter protein TERM 4419 4079313 - 4079295 - G 70 -10.2 -2.57795 | TGCACCAGCAATGTA GCCAGCGC CAA GCGCTGTC GCTCGCCGCCTGAAA Sde_3203 4080804 - 4079740 - | putative transmembrane ABC transporter protein,permease TERM 4420 4079920 - 4079898 - G 72 -3.2 -4.93877 | overlap 4079917 TGCCACCAAACAAAA CCGATGCCAG CAA CAGGAAGCGG TGATCCACAACGCCG TERM 4421 4080749 - 4080761 + g 74 -10.5 -3.18681 | opp_overlap 4080745 ACCACATTACATTCG CCCGC TTG GCGGG TTAATAGGCTTAGCG TERM 4422 4081071 - 4081043 - g 74 -8.2 -3.85817 | AGCCTCCCTCACAAA CGGCAGCAATAT TATTT ATATTGCAACCG CAACGGCTGGCGATA Sde_3204 4080960 - 4081487 + | adenosylcobinamide kinase TERM 4423 4082017 - 4081993 - g 80 -5.6 -4.91712 | overlap 4081995 GCTAACGCAGAAAAA GCCGCTGCCA GCTAT CGCCAGCAGC TTGCAGACATTGCCC TERM 4424 4082071 - 4082055 - g 95 -2.3 -6.07969 | TAAAAGCAAAAAAAA CGTAA CCGTGTT TTACG AAATATGGCACAGTC Sde_3205 4081480 - 4082409 + | parallel beta-helix repeat-containing protein Sde_3206 4082419 - 4083036 + | glutathione S-transferase, putative Sde_3207 4083243 - 4084145 + | hypothetical protein Sde_3208 4084188 - 4085021 + | mannosyl-3-phosphoglycerate phosphatase Sde_3209 4085115 - 4086335 + | hypothetical protein TERM 4425 4086646 - 4086629 - g 100 -7.7 -5.69473 | gap 1, overlap 4086632 GACAGCATAAAAAAA GAG-GGCG AAC CGCCACTC GATACACTAAATAAT Sde_3210 4086377 - 4088167 + | sucrose phosphorylase TERM 4426 4088679 - 4088657 - g 77 -10.6 -3.36878 | GCTAGCCAGCTAGAA GCACACATTG AGG CAATGCGCGC CCAGGGGTTCCCAGA TERM 4427 4089257 - 4089284 + G 73 -4 -4.80959 | gap 1, overlap 4089259 CAACCAGTTTTTATT GC-GGTAGGCGGC GTA GCCGTAAACCTGC TTTTGTTCTACGTTA TERM 4428 4090121 - 4090111 - g 82 -3.2 -5.52384 | GCTGCAGCAAAAAAA CCAC GAA ATGG AGCAGTTTATTTATA Sde_3211 4088258 - 4090786 + | bacteriophytochrome-like protein Sde_3212 4090789 - 4091241 + | response regulator receiver protein TERM 4429 4091648 - 4091633 - g 79 -4 -5.16572 | ATCGAACGTAAAAAA CAAACT GTAG AGCTTG AAAACCGCAACGCAG Sde_3213 4091261 - 4092340 + | two-component hybrid sensor and regulator TERM 4430 4092364 - 4092382 + T 79 -11.7 -2.52516 | opp_overlap 4092364, overlap 4092363 CCCCTAAACGAAAAA GCCCAGC GCGAA GCTGGGC CTTAATAATAACAAC TERM 4431 4092382 - 4092364 - T 100 -11.7 -4.98531 | opp_overlap 4092364 4092363 CCCCTAAACGAAAAA GCCCAGC GCGAA GCTGGGC CTTAATAATAACAAC Sde_3214 4093280 - 4092408 - | gluconolactonase TERM 4432 4093167 - 4093138 - G 71 -3.6 -4.75309 | TTAAAGGTAATAAAA TCATCTTTACCC GTTTTA GGGTCAAAACGA TGCAATTGGAAGGAA Sde_3215 4094023 - 4093442 - | hypothetical protein TERM 4433 4094037 - 4094056 + r 100 -13.6 -4.29176 | ATGGCGCCCTCCCAA TGGTGCGG CTAG CCGCACCA TTTTCGGTTGAATCT Sde_3216 4094413 - 4094045 - | YD repeat-containing protein TERM 4434 4094110 - 4094134 + g 100 -17.2 -4.74103 | opp_overlap 4094110 CCCCATAACGAAAAA CCCCGCTTGG CGAGA CCAAGCGGGG TTTTTGAATTCGGGG TERM 4435 4094134 - 4094110 - G 100 -17.9 -4.93365 | opp_overlap 4094110 CCCCATAACGAAAAA CCCCGCTTGGC GAG ACCAAGCGGGG TTTTTGAATTCGGGG TERM 4436 4094550 - 4094512 - R 100 -8.3 -4.79451 | gap 1, overlap 4094519 AGTGGAAAGATAAAA CGTAAA-ATGCCGCAACA ACCA TGTCGCGGCATACTCACA GGATTTGCCTAAATC TERM 4437 4094542 - 4094519 - R 100 -13.2 -4.46854 | overlap 4094512 AGATAAAACGTAAAA TGCCGCAACA ACCA TGTCGCGGCA TACTCACAGGATTTG TERM 4438 4094712 - 4094693 - R 70 -9.4 -2.87463 | AATTCTTGTGAGACA TTTCCTAC AAGC GTAGGAAA TTGACGGTGAGGAAG Sde_3217 4095373 - 4094810 - | modification methylase HemK motB 4096428 - 4095439 - | flagellar motor protein MotB Sde_3219 4097220 - 4096459 - | flagellar motor protein PomA Sde_3220 4097404 - 4097742 + | exodeoxyribonuclease VII small subunit Sde_3221 4097750 - 4098637 + | farnesyl-diphosphate synthase Sde_3222 4098777 - 4099163 + | phosphoribosyl-AMP cyclohydrolase Sde_3223 4099163 - 4099510 + | phosphoribosyl-ATP pyrophosphatase TERM 4439 4099635 - 4099668 + G 72 -8.9 -3.55563 | gap 1, opp_overlap 4099646 4099647 TTGTGTTGCTACTAT TCGGCACCAAACGCCT TAA AGGC-TTAGGTGGCGA TTTGGGCGGTGCAAT TERM 4440 4099779 - 4099757 - g 100 -3.3 -5.86061 | overlap 4099760 4099772 GCTGAGCAAAAAAAA GTAGCCGCT GAAGA AGCCGCTGC AGCAAAAACAGCTGA Sde_3224 4099571 - 4099822 + | ribosomal protein L25 TERM 4441 4100265 - 4100250 - g 73 -10.4 -3.03701 | overlap 4100248 4100245 GCCGAGCAAAGTAGA GGCCGA CACC TCGGCC GAAACACCGCAAGCA Sde_3225 4099825 - 4100334 + | peptidyl-tRNA hydrolase Sde_3226 4100324 - 4101097 + | hypothetical protein TERM 4442 4101110 - 4101085 - T 100 -13.3 -3.24118 | overlap 4101078 4101089 4101101 GACAGAAAGTGAAGA GCAAGCCAGCT AATT AGCGGGCTTGC AACACGCACCAATTA Sde_3227 4101582 - 4101148 - | cellulose binding, type IV Sde_3228 4102573 - 4101641 - | hypothetical protein Sde_3229 4103190 - 4102597 - | hypothetical protein Sde_3230 4103364 - 4104260 + | regulatory protein, LysR TERM 4443 4104514 - 4104489 - g 71 -9.7 -3.29043 | AATTTGTTTTTACAA GAGCTTGGCAG CTCA CTGCCAACCCC AAAAGCAATTGTTAT TERM 4444 4104950 - 4104938 - g 74 -6.9 -4.36903 | GTTACTAAATAGAAA CGGCG ACA CACCG ATATGGGCGGAGGAA Sde_3231 4104411 - 4105184 + | Na+/H+ antiporter NhaA Sde_3232 4106759 - 4105263 - | hypothetical protein TERM 4445 4106328 - 4106312 - G 73 -2.2 -5.2291 | overlap 4106327 ACAGCACAAGAAAAA CGGTAT TCGAT AAACCG AAATAACTTTTTTCG Sde_3233 4120153 - 4106756 - | hypothetical protein TERM 4446 4108361 - 4108332 - G 82 -7.9 -4.67011 | overlap 4108335 4108336 AATTGCATCGAAAAA TCACGACCAGCAA CCAC TTGCTGATCAGGA ATGGCAATATTTACT TERM 4447 4109349 - 4109335 - G 78 -5.6 -4.89233 | CAGTAATATCAAAAA CATCCG ACG CGGTTG TACCACCATCATCGT TERM 4448 4110267 - 4110253 - G 78 -5.6 -4.89233 | CAGTAATATCAAAAA CATCCG ACG CGGTTG TACCACCATCATCGT TERM 4449 4114135 - 4114119 - G 70 -5.1 -4.37527 | overlap 4114121 TCAGAATCACTAAAA CTGTTTG CTG CAAACTG ATAACTGAACGCGGT Sde_3234 4121278 - 4120349 - | hypothetical protein Sde_3235 4123449 - 4121314 - | M50 family peptidase TERM 4450 4121458 - 4121470 + g 72 -6.3 -4.21098 | opp_overlap 4121458 TAACGCCACATCCAA CAGAA ATA TTCTG TTTTGCGATTGCTCT TERM 4451 4121761 - 4121747 - G 76 -8.6 -4.17048 | CCCTGCTGAAAATAA CTACCT GGC AGGTAG TAAGGAACAGAAAAA TERM 4452 4122198 - 4122176 - G 77 -7 -4.43012 | gap 1, opp_overlap 4122178, overlap 4122178 ACCGCAACACTAAAA GC-CACCGC GCGTTT GCGGTGTGC GGTAATACTTTTATC TERM 4453 4123091 - 4123101 + g 100 -6.8 -6.12458 | opp_overlap 4123085 4123084, overlap 4123084 4123080 AGCAGCAACCGCTTC CAGC GCT GCTG TTTTTTATTTTTTTG Sde_3236 4125189 - 4123453 - | GAF domain-containing protein TERM 4454 4124983 - 4125019 + g 70 -8.8 -3.37344 | gap 1 AGTGCCGTCGGTGTC GCGCAGCATTTGCATAG CCTG CTTTGCAAATAC-GCGC TTGGTTACATCGGCC TERM 4455 4125886 - 4125864 - H 76 -7 -4.56597 | overlap 4125865 CGCGTCGTTCAAAAA CCTCAACCAA AGC TAGGTTGAGA AAAGTAAGACGCACT Sde_3237 4125970 - 4127862 + | cellulase TERM 4456 4127915 - 4127943 + F 72 -9.6 -3.21993 | gap 1, opp_overlap 4127906, overlap 4127911 4127909 TAATGACTAGCTTGT ATCCCCCC-TCAC CATT GTGATGGGGGGAG TTCAATCTTATAAAT TERM 4457 4128232 - 4128250 + F 70 -9.6 -2.88386 | overlap 4128231 4128241 4128243 TCCATTTCGGCCTTG TGGTAGGG TTG CCTTACCA ATTCTTGTAGGGTAT TERM 4458 4129009 - 4128995 - g 72 -5.6 -4.42325 | ATAGACATAAAAGAA GGCACC AAA GGCACC ATATTCGAATACAAC Sde_3238 4128320 - 4130278 + | hypothetical protein TERM 4459 4130334 - 4130370 + F 95 -9.6 -4.56597 | gap 1, opp_overlap 4130368, overlap 4130335 ATCCTCCTCGGGATT ACGTTCACTTTGTG-GT AGCT ACTCGCAAAGTGAACGC TTTTTAACGAACCAC TERM 4460 4130335 - 4130369 + F 100 -13.1 -3.33744 | gap 1, opp_overlap 4130368, overlap 4130334 TCCTCCTCGGGATTA CGTTCACTTTGTG-GT AGCT ACTCGCAAAGTGAACG CTTTTTAACGAACCA TERM 4461 4130637 - 4130609 - f 100 -10.5 -4.66953 | CGAAGAGTTTAAAAA TTCAACTAAATCA TTG TGATTAAGTTGAA GTAAAACGCATTGCT Sde_3239 4130713 - 4132629 + | cellulase TERM 4462 4133302 - 4133282 - T 71 -8.3 -3.53444 | TGATTTTGGCTCAAA CCTAATCAC CCA GGGATTAGG GAGAATCAACAACAC Sde_3240 4134276 - 4133935 - | prolyl 4-hydroxylase, alpha subunit Sde_3241 4134795 - 4134493 - | hypothetical protein Sde_3242 4135263 - 4134883 - | parallel beta-helix repeat-containing protein Sde_3243 4135988 - 4135641 - | hypothetical protein Sde_3244 4136424 - 4136035 - | triosephosphate isomerase TERM 4463 4136075 - 4136063 - G 76 -4.9 -4.82901 | opp_overlap 4136063 TTGTTTTCACAAAAA TAAAC GTG GTTTA TTTTCGGGTAGAAAT Sde_3245 4137274 - 4136960 - | hypothetical protein Sde_3246 4137958 - 4137620 - | fructose-bisphosphate aldolase, class II TERM 4464 4139215 - 4139260 + r 88 -10.7 -3.79506 | opp_overlap 4139221, overlap 4139219 4139221 AAAAACAAACGAAAA TAAAAACAGGCACTAATTAAA TTTC TTTAACTAGTGCCTGTCTTGA TTATTCCATTTAATT TERM 4465 4139219 - 4139256 + r 89 -11.5 -3.56576 | opp_overlap 4139221, overlap 4139215 4139221 ACAAACGAAAATAAA AACAGGCACTAATTAAA TTTC TTTAACTAGTGCCTGTC TTGATTATTCCATTT TERM 4466 4139254 - 4139221 - R 100 -16.3 -5.56372 | opp_overlap 4139219 4139215 4139221 AAACGAAAATAAAAA CAGGCACTAATTAAA TTTC TTTAACTAGTGCCTG TCTTGATTATTCCAT TERM 4467 4139221 - 4139254 + r 100 -14.1 -3.3449 | opp_overlap 4139221, overlap 4139219 4139215 AAACGAAAATAAAAA CAGGCACTAATTAAA TTTC TTTAACTAGTGCCTG TCTTGATTATTCCAT Sde_3249 4147295 - 4139754 - | Rhs family protein-like TERM 4468 4141274 - 4141295 + g 73 -7.9 -4.02571 | overlap 4141272 CACCCGCCACGGTGC GGCGCCACT CAAA GGTGTCGCC TTGTTTAATACGTTC TERM 4469 4144290 - 4144270 - G 78 -4.8 -4.94222 | gap 1, opp_overlap 4144270, overlap 4144272 4144274 AAGAATTCAGAAAAA CT-TACCTC ACGC GAGGTACAG GTTGTCATAGCTGTT TERM 4470 4145057 - 4145079 + g 73 -7.8 -4.05991 | CGCTTACAGCGATTG TAGTGCTAAA TCG TTGAGCACTA TTTGTAGTATCTCTT TERM 4471 4146238 - 4146251 + g 72 -3.1 -4.94058 | gap 1 TTGGGGTTGCCTATT GC-GTC TCC GACAGC TTTTATTTCAATTGC Sde_3250 4148735 - 4147869 - | protein methyltransferase hemK TERM 4472 4148590 - 4148616 + g 88 -5.7 -5.53288 | GGGGAAGGGATTTTA TCGCTCCAGGT GTATA GCCAGGTGCGA TTTTTTTGCATTACA Sde_3251 4149810 - 4148728 - | peptide chain release factor 1 Sde_3252 4151084 - 4149807 - | glutamyl-tRNA reductase TERM 4473 4149873 - 4149854 - G 72 -2.8 -4.98531 | gap 1 TGGGCAAACTAAAAA GCGTGCGCA CGG TGCGAA-GC ATATCTTGCTCGCCA TERM 4474 4151193 - 4151204 + H 75 -2.2 -5.28176 | ATCTTTGAATTATGC CGTG CTAG TACG TTTTTTATACATGCA Sde_3253 4151340 - 4153115 + | TPR domain-containing protein Sde_3254 4153099 - 4153728 + | GntR family transcriptional regulator TERM 4475 4154179 - 4154196 + G 78 -5.5 -4.83615 | overlap 4154181 AGCTTGGCCGCCAGC TAGGCGC AGAC GTGCCTG TTTTTGTAGAAGGTA Sde_3255 4153773 - 4154639 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Sde_3256 4154782 - 4155723 + | ribose-phosphate diphosphokinase TERM 4476 4155728 - 4155762 + F 100 -14.4 -4.42806 | opp_overlap 4155726 4155737 4155738, overlap 4155730 4155738 TGTTTAGATAAAATT TTCAATAAAGCCGCGC ACC GCGCGGTTTTGTTGTA TTTATTTACCGGTAA TERM 4477 4155730 - 4155760 + F 100 -17 -3.81958 | opp_overlap 4155726 4155737 4155738, overlap 4155728 4155738 TTTAGATAAAATTTT CAATAAAGCCGCGC ACC GCGCGGTTTTGTTG TATTTATTTACCGGT TERM 4478 4155753 - 4155737 - f 85 -9.3 -4.19974 | opp_overlap 4155730 4155728 4155738, overlap 4155726 4155738 AAAATTTTCAATAAA GCCGCGC ACC GCGCGGT TTTGTTGTATTTATT TERM 4479 4155738 - 4155752 + F 100 -12.8 -4.96657 | opp_overlap 4155737 4155726 4155738, overlap 4155730 4155728 AAATTTTCAATAAAG CCGCGC ACC GCGCGG TTTTGTTGTATTTAT TERM 4480 4155752 - 4155738 - f 95 -12.8 -3.109 | opp_overlap 4155738 4155730 4155728, overlap 4155737 4155726 AAATTTTCAATAAAG CCGCGC ACC GCGCGG TTTTGTTGTATTTAT Sde_3257 4155881 - 4156513 + | 50S ribosomal protein L25/general stress protein Ctc TERM 4481 4156535 - 4156559 + F 91 -12.2 -3.55444 | opp_overlap 4156537 4156540, overlap 4156541 GCCTTTTACCCTAAG CAGAAGGCCC CTTGC GGGCTTTCTG TTTACCCCCTCCACC TERM 4482 4156541 - 4156553 + F 72 -6.2 -4.32857 | opp_overlap 4156540 4156537, overlap 4156535 TACCCTAAGCAGAAG GCCC CTTGC GGGC TTTCTGTTTACCCCC Sde_3258 4156606 - 4157199 + | peptidyl-tRNA hydrolase Sde_3259 4157210 - 4158301 + | translation-associated GTPase TERM 4483 4158808 - 4158819 + T 73 -7.2 -4.09864 | CTGGTCACGCCGGAA GGCG GCTG CGCC TTTTCCGGCCTACGT TERM 4484 4159101 - 4159117 + T 100 -13.7 -3.70863 | opp_overlap 4159101 CCCCCAAATAAAAAA CCCCAGC ATT GCTGGGG TTTGGGTACTATCTA TERM 4485 4159117 - 4159101 - T 100 -13.7 -5.63517 | opp_overlap 4159101 CCCCCAAATAAAAAA CCCCAGC ATT GCTGGGG TTTGGGTACTATCTA Sde_3260 4160675 - 4159173 - | hypothetical protein TERM 4486 4159432 - 4159444 + g 88 -3.4 -5.67063 | CCGTTGCCTGTGGAA TTGC CATCA GCAA TTTTTTTGTAGTCGG Sde_3261 4162019 - 4161090 - | hypothetical protein TERM 4487 4162093 - 4162108 + r 71 -8.2 -3.44325 | TAAAATTACAGATGC CGTGCC CGAT GGCGCG TTGCTTATCGGGCCT Sde_3262 4163615 - 4162251 - | hypothetical protein TERM 4488 4162339 - 4162320 - G 73 -4.2 -4.88388 | opp_overlap 4162322, overlap 4162322 ATAACTGTATAAAAA TAGCCGAT ACTC ACCGGCTT CGCTGGGCGCTGTAA TERM 4489 4162337 - 4162322 - G 71 -6.8 -4.05669 | opp_overlap 4162322, overlap 4162320 AACTGTATAAAAATA GCCGAT ACTC ACCGGC TTCGCTGGGCGCTGT Sde_3263 4164430 - 4164023 - | hypothetical protein TERM 4490 4164253 - 4164265 + g 71 -3.3 -4.73973 | overlap 4164254 TGGCATCGGGTGCTG CCGAC TGC GTCGC TTTGTTATTTTCTGT Sde_3264 4165575 - 4164427 - | sodium-proton antiporter NhaA TERM 4491 4164925 - 4164907 - G 79 -10.2 -3.54902 | CCAGGCAATAACGAA GCCCGCCA GCG TGGCGTGC ACACCCGATTTTAAA TERM 4492 4165189 - 4165179 - G 76 -4.6 -4.98616 | CGAAAAGACTAAAAA CGCC TAG GGCA AACGCGATATCCGTC Sde_3265 4165711 - 4166601 + | LysR family transcriptional regulator TERM 4493 4167030 - 4167003 - g 100 -4 -5.86965 | opp_overlap 4167003 4167008 4167010 ACGCACTAAAAAAAA CCGCATGCGCAC TTTT GTGCGTATTTGG TATTACACAGTTTAG TERM 4494 4167008 - 4167025 + G 71 -7.7 -3.92324 | opp_overlap 4167003, overlap 4167003 4167010 CTAAAAAAAACCGCA TGCGCAC TTTT GTGCGTA TTTGGTATTACACAG TERM 4495 4167514 - 4167500 - g 79 -10 -3.679 | AAACGTTTAACACAA TGTGCC GAT GGCACA CGCAAACCACAATGT Sde_3266 4166981 - 4168213 + | hypothetical protein TERM 4496 4168325 - 4168299 - T 100 -11.7 -4.05004 | gap 1, opp_overlap 4168299 TCACCATAACAATAA GCCGGATGAGCA GTGG TGCT-ATCCGGC TTTTTTACGAGCAAG TERM 4497 4168299 - 4168325 + T 100 -11.7 -5.00616 | gap 1, opp_overlap 4168299 TCACCATAACAATAA GCCGGATGAGCA GTGG TGCT-ATCCGGC TTTTTTACGAGCAAG Sde_3267 4169810 - 4168359 - | tRNA-i(6)A37 modification enzyme MiaB TERM 4498 4168826 - 4168838 + g 76 -4.1 -5.06451 | TATCCCCTGCTGTTA GGTAG CTA TTACC TTTTTTAACATAGTA TERM 4499 4168875 - 4168865 - G 84 -8.2 -4.66318 | opp_overlap 4168865, overlap 4168854 AGTACGCTAACAAAA GCGC TAA GCGC GCTTGCCTGTAGAGT TERM 4500 4169085 - 4169099 + g 72 -6.4 -4.2349 | AGCTCTAATCTCATT CATGCG CTC TGCATG TTTTGCATCTAGGGC TERM 4501 4169322 - 4169308 - G 74 -3.5 -5.08824 | CGCTCATCTAAAAAA CCTAC GTCTA GCAGG TTGTACTTGGGGTCA Sde_3268 4170475 - 4169828 - | hypothetical protein TERM 4502 4170490 - 4170462 - G 82 -11.7 -3.32963 | overlap 4170463 4170465 ATTTGCACCTCATAA TTATCGACGCCCA TCA CGGGCGCCGATAC ACGTTACGTGTCATA TERM 4503 4170489 - 4170463 - G 90 -15.2 -2.59564 | overlap 4170462 4170465 TTTGCACCTCATAAT TATCGACGCCCA TCA CGGGCGCCGATA CACGTTACGTGTCAT TERM 4504 4170487 - 4170465 - G 82 -13.4 -2.83822 | overlap 4170463 4170462 TGCACCTCATAATTA TCGACGCCCA TCA CGGGCGCCGA TACACGTTACGTGTC Sde_3269 4171617 - 4170514 - | hypothetical protein Sde_3270 4172708 - 4172106 - | CBS Sde_3271 4175475 - 4172806 - | glycosyl hydrolase TERM 4505 4173411 - 4173435 + g 72 -6.4 -4.23999 | TGTGGGTATCTATAT GGCGGCTG CCCCAATAA TAGCCGCC TTCTTTTGGGTCTGG TERM 4506 4177389 - 4177377 - g 79 -7.7 -4.4891 | GCCACGAGTACAAAA TCGCT TCT AGCGA GCGTACTGCGATGAC Sde_3272 4176251 - 4177909 + | hypothetical protein TERM 4507 4177948 - 4177921 - f 95 -12.8 -3.06315 | opp_overlap 4177922, overlap 4177912 GTAAGACCGTTAATA TTTTGGCTCACC TTCG GGTGAGCCAAAT TTTATTTGCAGTTTA TERM 4508 4177922 - 4177947 + F 100 -16.3 -4.91429 | opp_overlap 4177921 4177912 TAAGACCGTTAATAT TTTGGCTCACC TTCG GGTGAGCCAAA TTTTATTTGCAGTTT TERM 4509 4178895 - 4178879 - g 72 -5.1 -4.62772 | opp_overlap 4178879, overlap 4178881 TTGAAATTAAAGAAA TGCCC GAGCACG GGGCA GTTATGGGCCAGCGC Sde_3273 4178278 - 4179714 + | hypothetical protein TERM 4510 4179976 - 4179958 - T 88 -9.5 -4.35646 | opp_overlap 4179958 4179957 4179966 ACACCCAAATAGAAA CGGCCCG ATAAA CGAGCCG CTTAATTTTTGTTTT Sde_3274 4181596 - 4180019 - | Poly(beta-D-mannuronate) lyase TERM 4511 4181063 - 4181074 + g 80 -5.8 -5.00616 | opp_overlap 4181063 4181062 CTGAACCTGTAAAAC TCGG CTGC CCGA TTTTTTAGCACCGAA TERM 4512 4181606 - 4181617 + r 85 -5.8 -5.0917 | TTTCATACATCATCT CGCA ACGT TGCG TTTGTTTTTTAATAA TERM 4513 4181682 - 4181666 - R 100 -13.7 -5.53991 | TATTTATTAAAAAAA GCCCCAC AGA GTGGGGC CAATGCTACTCACAT Sde_3275 4184393 - 4181715 - | leucyl-tRNA synthetase class Ia Sde_3276 4185350 - 4184499 - | hypothetical protein Sde_3277 4186539 - 4185784 - | triosephosphate isomerase TERM 4514 4186485 - 4186495 + g 72 -8.2 -3.69437 | opp_overlap 4186484 ACGACTCCACCAACT CGGC ACT GCCG TTCATTTTCCAATTG Sde_3278 4188306 - 4186558 - | response regulator receiver domain-containing protein TERM 4515 4187899 - 4187876 - G 72 -3.2 -5.03715 | gap 1, opp_overlap 4187876 4187879, overlap 4187878 4187892 ACTAGCGCGAAAAAA TCTTGCGCACT TAA AGTGCG-AATA TTCTGCGCAAGCATT TERM 4516 4188089 - 4188057 - G 85 -3.7 -5.55664 | gap 2 CCACCATTAAAAAAA GTGCTGTAA--AAAG TATTT CTTTGCTTACAGCAC TAGTGCGATCGAGCT TERM 4517 4188370 - 4188335 - R 100 -11.9 -3.78067 | opp_overlap 4188334, overlap 4188336 AATAGGTAAGGTAAA TCTAGGTCGCCTCGC TTATAC GCGAAGCGACCTAAC CTGCTTAAGCTATTT TERM 4518 4188369 - 4188336 - R 100 -15.4 -2.86117 | opp_overlap 4188334, overlap 4188335 ATAGGTAAGGTAAAT CTAGGTCGCCTCGC TTATAC GCGAAGCGACCTAA CCTGCTTAAGCTATT Sde_3279 4189472 - 4188375 - | fructose-bisphosphate aldolase Sde_3280 4190624 - 4189686 - | 2-keto-3-deoxygluconate kinase TERM 4519 4190245 - 4190255 + g 72 -5.4 -4.51933 | AATCCTTCTAAATCT GCAT ACA ATGC TTGTTTCTTTTCTTC TERM 4520 4190743 - 4190727 - R 100 -13.7 -3.54424 | opp_overlap 4190718 TCCCATGCTTTTAAA GGGCAGC CAC GCTGCCC TGAACAACAGCTTAT Sde_3281 4191507 - 4190755 - | hypothetical protein Sde_3282 4192845 - 4191571 - | putative hexuronate transporter Sde_3283 4193201 - 4192857 - | diguanylate cyclase/phosphodiesterase Sde_3284 4195536 - 4193326 - | hypothetical protein Sde_3285 4197835 - 4195553 - | TonB-dependent receptor TERM 4521 4196947 - 4196975 + g 72 -6.1 -4.25859 | opp_overlap 4196940 4196969, overlap 4196938 4196944 CACGAATACCACCGG TGTGATCTTTG CCATTAC CAAAGAACACA TTGTTTTCGATTACG TERM 4522 4197937 - 4197908 - H 100 -10.7 -5.60993 | TTGTCGAGAAAAAAA TGCCAGTCCCGCC ACGG AGCGCAACTGGCA CAAAATAAGCGATTT TERM 4523 4198480 - 4198470 - g 78 -5.4 -4.78933 | TGAAAACAGAGAAAA TTGG CAC CCAA ACTTCCAATAAACCA Sde_3286 4198361 - 4199392 + | Poly(beta-D-mannuronate) lyase Sde_3287 4199547 - 4200317 + | GntR family transcriptional regulator TERM 4524 4200331 - 4200361 + T 74 -9.8 -3.14344 | AAAACCTCACTCTTT TGGCTGCTGG CACCGCCAAAA CCAGCAGCCA TTCATCACACCGCTA Sde_3288 4200911 - 4200366 - | hypothetical protein TERM 4525 4200978 - 4200951 - R 71 -4.8 -4.62622 | opp_overlap 4200955 4200957, overlap 4200954 GTAATTACAAATAAA CACTCACGGGAA ACTC TTCCCGTATTTG AATAAACGGCTGATG TERM 4526 4200957 - 4200972 + r 73 -9 -3.40597 | opp_overlap 4200954 4200951, overlap 4200955 ACAAATAAACACTCA CGGGAA ACTC TTCCCG TATTTGAATAAACGG Sde_3289 4201491 - 4200940 - | hypothetical protein TERM 4527 4201650 - 4201631 - H 71 -5 -4.62904 | gap 1, overlap 4201633 AAACATGGTCAAAAA CAGTGCAGG CAC CCTACAC-G AACCTCAAGACTCAT TERM 4528 4201649 - 4201633 - H 80 -8.7 -3.91908 | overlap 4201631 ACATGGTCAAAAACA GTGCAGG CAC CCTACAC GAACCTCAAGACTCA Sde_3290 4201633 - 4202982 + | transcriptional regulator TERM 4529 4203073 - 4203126 + T 100 -14.1 -3.51349 | opp_overlap 4203074 4203088, overlap 4203074 4203088 AACAGCTAACAGCTA ACAGAAAATAAAAAAGGCTTGGCGG GTAT CCGGCAAGCCTTTTTTGTTATTTGG GTTTATTTTTCAACT TERM 4530 4203125 - 4203074 - T 95 -13.2 -3.19789 | opp_overlap 4203073 4203074 4203088, overlap 4203088 ACAGCTAACAGCTAA CAGAAAATAAAAAAGGCTTGGCGG GTAT CCGGCAAGCCTTTTTTGTTATTTG GGTTTATTTTTCAAC TERM 4531 4203074 - 4203125 + T 100 -17.6 -2.69725 | opp_overlap 4203074 4203088, overlap 4203073 4203088 ACAGCTAACAGCTAA CAGAAAATAAAAAAGGCTTGGCGG GTAT CCGGCAAGCCTTTTTTGTTATTTG GGTTTATTTTTCAAC TERM 4532 4203088 - 4203111 + T 100 -12.4 -5.72254 | opp_overlap 4203088 4203074, overlap 4203074 4203073 ACAGAAAATAAAAAA GGCTTGGCGG GTAT CCGGCAAGCC TTTTTTGTTATTTGG TERM 4533 4203111 - 4203088 - T 100 -12.4 -5.8901 | opp_overlap 4203074 4203073 4203088, overlap 4203074 ACAGAAAATAAAAAA GGCTTGGCGG GTAT CCGGCAAGCC TTTTTTGTTATTTGG Sde_3291 4203748 - 4203185 - | hypothetical protein Sde_3292 4204226 - 4203897 - | hypothetical protein Sde_3293 4204546 - 4205508 + | hypothetical protein Sde_3294 4205534 - 4206508 + | hypothetical protein TERM 4534 4206865 - 4206839 - g 72 -5.1 -4.56597 | overlap 4206843 4206854 CTGTGGGTGGAAAAA CTCATGCGCAA AAACG CTGCGCATATG CACGCCCGCACAGAG Sde_3295 4206722 - 4207819 + | putative carboxypeptidase TERM 4535 4207984 - 4207958 - g 77 -7.2 -4.39329 | opp_overlap 4207963 ACTTTACACAACAAA CAAGCCCCACCA CAA TTGCGGGTCTTG CCGATCATATAGAAA TERM 4536 4208394 - 4208366 - g 73 -11 -2.74188 | gap 1, overlap 4208365 CACCACAAGTAGAAT GC-GGCGAGCAGC TTAC GCTGCTAGCCAGC GCGAGCGACAAATTG Sde_3296 4207816 - 4208559 + | alpha/beta fold family hydrolase TERM 4537 4208585 - 4208642 + T 95 -13.9 -2.71243 | opp_overlap 4208567, overlap 4208585 4208588 CTAATTGCTAATCTC TAATTGCTAATCTCTAGCTATTAATTA CTAG TAATTAGCGACTAGAGATTAGCGATTA CTCTTCTTCTGTACG TERM 4538 4208588 - 4208639 + T 83 -11.2 -3.49298 | opp_overlap 4208567, overlap 4208585 4208585 ATTGCTAATCTCTAA TTGCTAATCTCTAGCTATTAATTA CTAG TAATTAGCGACTAGAGATTAGCGA TTACTCTTCTTCTGT Sde_3297 4208942 - 4208640 - | hypothetical protein Sde_3298 4209722 - 4208946 - | hypothetical protein TERM 4539 4209698 - 4209680 - G 71 -10.3 -2.7395 | overlap 4209679 ATATAGGTGGCAAAT CTGGGTG GGGCT CACCCAG TATGCGAAAATTTAA Sde_3299 4210087 - 4209758 - | hypothetical protein TERM 4540 4209905 - 4209916 + g 74 -7.2 -4.35874 | CGAACGCTTCACACC GGCG AACT CGCC TTTTAGCTTCTCTTC TERM 4541 4210152 - 4210129 - H 76 -6.6 -4.54047 | GGAGCCTATAGAAAA GCCAGCGC GAGCGAAT GCGCAGGC CCCTCTCCAAGGGGC Sde_3300 4210403 - 4211767 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4542 4211836 - 4211791 - f 80 -11.4 -2.64912 | gap 1, opp_overlap 4211800, overlap 4211795 4211799 4211800 CCGCCAACGCACAAG CAAACAAATGGGCGCGGTAAA CAACC CTTACTGCGCCC-TTTGTTTA TAAACCTTCGCGATT TERM 4543 4211832 - 4211795 - f 86 -10 -4.01939 | gap 1, opp_overlap 4211800, overlap 4211791 4211799 4211800 CAACGCACAAGCAAA CAAATGGGCGCGGTAAA CAACC CTTACTGCGCCC-TTTG TTTATAAACCTTCGC TERM 4544 4211829 - 4211799 - f 81 -7.5 -4.59982 | opp_overlap 4211800, overlap 4211795 4211791 4211800 GCACAAGCAAACAAA TGGGCGCGGTAAA CAACC CTTACTGCGCCCT TTGTTTATAAACCTT TERM 4545 4211828 - 4211800 - f 81 -11 -3.34905 | opp_overlap 4211800, overlap 4211799 4211795 4211791 CACAAGCAAACAAAT GGGCGCGGTAAA CAACC CTTACTGCGCCC TTTGTTTATAAACCT TERM 4546 4211800 - 4211828 + F 100 -12.5 -4.55697 | opp_overlap 4211800 4211799 4211795 4211791 CACAAGCAAACAAAT GGGCGCGGTAA ACAACCC TTACTGCGCCC TTTGTTTATAAACCT TERM 4547 4211844 - 4211856 + F 75 -9.1 -3.60818 | opp_overlap 4211842 TTTGTTTATAAACCT TCGCG ATT CGCGA TTTAGACCCTTTTAC TERM 4548 4211885 - 4211899 + F 71 -8.6 -3.5013 | ACCCACCGCAAACTT GGGTTA GTC TAACCC TTACTTCGTTTCCAC TERM 4549 4212551 - 4212530 - g 80 -6.5 -4.75174 | GACCTAAGCCAAAAA GTGGACCCA TACC TGCGCCCAC TCTACGACGCACTGT Sde_3301 4211930 - 4213024 + | lipoate synthase Sde_3302 4213028 - 4213477 + | lipoate-protein ligase B Sde_3303 4213551 - 4214429 + | hypothetical protein TERM 4550 4214558 - 4214582 + G 77 -10.7 -3.3482 | GTGGGTGCTTGGTAT GCTTGCCACCA CCG TGTTGGCGAGC TTACTTACCGGCTTA TERM 4551 4214590 - 4214611 + G 70 -2.3 -5.01732 | gap 1 TGGCGAGCTTACTTA CCG-GCTT AAATGGC AAGCGCGG TTTTTTACGCAGCTT TERM 4552 4215054 - 4215036 - g 70 -8.8 -3.30554 | overlap 4215029 CTAAGTAAGGACGAA GACAGCGC CCC GCACTGCC AACCGCGTACTACAC lnt 4214445 - 4216010 + | apolipoprotein N-acyltransferase TERM 4553 4216073 - 4216086 + G 70 -2.3 -5.02476 | GCGTTTTAGCTTTGG TTGGC TGCT GCCTA TTTTTTACCGCCTGT Sde_3305 4216018 - 4216887 + | rare lipoprotein A Sde_3306 4217879 - 4216902 - | lytic murein transglycosylase B Sde_3307 4218144 - 4218611 + | rod shape-determining protein RodA TERM 4554 4219945 - 4219928 - g 80 -9.9 -4.00756 | GACCTCACCAAAGAA GCCTTTG TCGA CAAAGGC GTGCTAGTGAACAGC TERM 4555 4221171 - 4221159 - g 74 -3.3 -5.05782 | ACGCACTGGAAAAAA TCGCC CTA GCCGA TGAAAGTGTTTTAAA Sde_3308 4218800 - 4221259 + | leucyl-tRNA synthetase TERM 4556 4221268 - 4221293 + F 100 -14 -3.06483 | opp_overlap 4221285 CAACTAATGCTGCTT GCGGCGCGCT GTAACA AGCGCGCTGC TCTGTACTTTACATA Sde_3309 4221368 - 4221880 + | hypothetical protein TERM 4557 4222553 - 4222542 - g 71 -7.2 -4.03234 | GGTTTGTTAGATAAA GCCC TGCT GGGC GATGCGCAAGCGGCA holA 4221882 - 4222928 + | DNA polymerase III subunit delta Sde_3311 4224232 - 4223027 - | diguanylate phosphodiesterase TERM 4558 4223672 - 4223661 - G 74 -5.8 -4.65916 | GCCACCGCAATAAAA CGGT TCGC ACCG ATTAAGCCCTCGCCA TERM 4559 4224462 - 4224476 + r 85 -5.6 -5.09685 | overlap 4224463 GGCAACTACAGCGCC ACAGCC TTA GGCTGA TTTTTATATGTATTG TERM 4560 4224463 - 4224475 + r 75 -9.1 -3.64184 | overlap 4224462 GCAACTACAGCGCCA CAGCC TTA GGCTG ATTTTTATATGTATT Sde_3312 4225658 - 4224564 - | gamma-glutamyl phosphate reductase GPR TERM 4561 4224696 - 4224683 - G 70 -2.4 -5.04868 | CCAAACTAAACAAAA TACC GTAAGG GGTA AGCGGGGTTACATCT TERM 4562 4227631 - 4227611 - g 75 -2.6 -5.13521 | gap 1, overlap 4227613 AAATTACCCAAAAAA TAGTGCAGT TTGC AC-GCACCA AAAAAATTACAACGG TERM 4563 4227625 - 4227613 - g 73 -7.7 -4.1821 | overlap 4227611 ATTACCCAAAAAATA GTGCA GTT TGCAC GCACCAAAAAAATTA Sde_3313 4225867 - 4227771 + | diguanylate cyclase/phosphodiesterase Sde_3314 4227897 - 4228889 + | hypothetical protein Sde_3315 4229709 - 4228966 - | hypothetical protein Sde_3316 4231504 - 4229759 - | diguanylate cyclase/phosphodiesterase TERM 4564 4230406 - 4230429 + g 75 -6.7 -4.46212 | opp_overlap 4230406 4230405 CTAGTGGAATAAAAT CTAACGGCG AAATAA CGCCCTTAG TTTTATGCTGCCAGC TERM 4565 4231405 - 4231389 - G 79 -10.1 -3.73775 | GCCAGTGCCATTAAA GCGGGCA TTT TACCCGC AAGCACTTCTAACGA Sde_3317 4232058 - 4235582 + | Beta-xylosidase-like TERM 4566 4235622 - 4235585 - f 74 -4.7 -4.77165 | opp_overlap 4235592 4235593, overlap 4235586 4235587 CGCTGCAGAATAAAA CGGTGAACGCGGAGAGG TTAG CCTCTCCGCCTTATACA AGAATAATCACACTG TERM 4567 4235592 - 4235615 + F 95 -12.4 -3.2963 | opp_overlap 4235586 4235587 4235585, overlap 4235593 GAATAAAACGGTGAA CGCGGAGAGG TTAG CCTCTCCGCC TTATACAAGAATAAT TERM 4568 4235593 - 4235614 + F 100 -15.9 -2.57564 | opp_overlap 4235586 4235587 4235585, overlap 4235592 AATAAAACGGTGAAC GCGGAGAGG TTAG CCTCTCCGC CTTATACAAGAATAA TERM 4569 4236518 - 4236540 + G 78 -6.2 -4.56597 | overlap 4236515 4236513 4236519 4236520 GAATATATTTTATCG CGCGACGCAA TGT TTGCGTCGGA TTTTTCAGGCGAACG TERM 4570 4236519 - 4236539 + G 73 -9.7 -3.33744 | overlap 4236515 4236513 4236518 4236520 AATATATTTTATCGC GCGACGCAA TGT TTGCGTCGG ATTTTTCAGGCGAAC TERM 4571 4236520 - 4236538 + G 81 -13.2 -2.60032 | overlap 4236515 4236513 4236519 4236518 ATATATTTTATCGCG CGACGCAA TGT TTGCGTCG GATTTTTCAGGCGAA Sde_3318 4235684 - 4238548 + | Outer membrane receptor proteins mostly Fe transport-like TERM 4572 4238597 - 4238638 + T 100 -15.5 -3.54424 | opp_overlap 4238597, overlap 4238598 AAATTGCACATGCAA GGTATAGATGATTAGCGAA AGAA TTTGCTAATCATCTATACA TTTAAACGAGTAACA TERM 4573 4238638 - 4238597 - T 100 -13.3 -3.13743 | opp_overlap 4238597 4238598 AAATTGCACATGCAA GGTATAGATGATTAGCGAA AGAA TTTGCTAATCATCTATACA TTTAAACGAGTAACA TERM 4574 4238598 - 4238637 + T 100 -19 -2.72511 | opp_overlap 4238597, overlap 4238597 AATTGCACATGCAAG GTATAGATGATTAGCGAA AGAA TTTGCTAATCATCTATAC ATTTAAACGAGTAAC Sde_3319 4239098 - 4238730 - | hypothetical protein Sde_3320 4239709 - 4239233 - | response regulator receiver domain-containing protein TERM 4575 4239721 - 4239693 - G 78 -12.5 -2.52896 | overlap 4239700 GGACTCGGCAAGCGA GGACTAAGCGCAA CCA TTGCGCCTACTCC GACGCCGCGTCTGCA TERM 4576 4239714 - 4239700 - G 71 -10 -3.2327 | overlap 4239693 GCAAGCGAGGACTAA GCGCAA CCA TTGCGC CTACTCCGACGCCGC Sde_3321 4240569 - 4239715 - | histidine kinase TERM 4577 4239957 - 4239947 - G 79 -2.4 -5.47218 | opp_overlap 4239947 TCGGAGGCAAAAAAA GTGG TAT CCCC TATCTTGAACTCGCA Sde_3322 4242039 - 4240777 - | RNA polymerase ECF-subfamily sigma-70 factor TERM 4578 4240873 - 4240849 - G 77 -10.7 -3.35798 | overlap 4240862 ATTCGTTAGCGACAA CGCTCGCTCAA AAG CCGAACGAGCG CCCATTAGTTCCCCA TERM 4579 4241282 - 4241261 - G 70 -9.5 -2.94958 | overlap 4241256 AGCAAAATAATATCA CCAGCAGAA TTTG TTCTACTGG CACTACGTGACTGAT TERM 4580 4242237 - 4242274 + r 84 -6.2 -4.9725 | opp_overlap 4242237 ACGATGGTGTACTAA GCACTCGTATCCCCCC AAAAGC GGTGTGGTACAAGTGC TTTTTGTATAAAACT Sde_3323 4252730 - 4242297 - | hypothetical protein TERM 4581 4243623 - 4243649 + g 73 -10 -3.31415 | opp_overlap 4243622 4243623 GAGATAATCAGAAAT GCCATCGCCGTC GGT GTCGGCGGTGCC TTCGGTTTCATCATC TERM 4582 4251571 - 4251583 + g 70 -9.1 -3.41051 | opp_overlap 4251569 4251568 4251571 CTGGCAGCAAAAGTA CCGCT GCT AGCGG TTATAGTGGCGGTGA TERM 4583 4252526 - 4252507 - G 72 -10.8 -2.78266 | opp_overlap 4252494, overlap 4252498 4252494 4252504 AACGGAGTAATAGTA TTACCCAG TGTA CTGGGTAA TGGGTGCACCGCAGT Sde_3324 4253983 - 4252754 - | hypothetical protein TERM 4584 4253503 - 4253530 + g 79 -2.6 -5.38047 | overlap 4253504 TAATAAAACAACTGT CTACACGCGGGT CGAC GCCTTCGTGTAA TTTTTTCTGTCGCTC TERM 4585 4253972 - 4253982 + g 86 -4 -5.4659 | TGTTTGCTCATCGGG TGAT TCA ATCA TTTTTATTTATCTTG Sde_3325 4255238 - 4253976 - | SelT/selW/selH selenoprotein TERM 4586 4255236 - 4255221 - G 81 -4.7 -5.09895 | TATGCACGCAAAAAA GGCAA CTGAGC TTGCC ATAACTTTTGCGCGT TERM 4587 4255340 - 4255314 - R 100 -10.3 -4.52669 | gap 1 AATAATTCAAACAAA GCGTTAGCC-TA TAAA TATGGCTAACGC GTTAAACGTACATAT Sde_3326 4255891 - 4255361 - | forkhead-associated TERM 4588 4255842 - 4255826 - G 72 -6.5 -4.36914 | opp_overlap 4255811, overlap 4255811 TTGGCCGTCACAAAA CGCCCAA TCT CTAGGCG CGAAGCTACCCGCAA Sde_3327 4256427 - 4255903 - | phenylacrylic acid decarboxylase TERM 4589 4256200 - 4256225 + g 82 -11.9 -3.40371 | gap 1 GCCCCTTGAGCCTAG TC-GCCTTGGGC TAA GCCCAGGGCCGA TTCCTTGGTGCAATG TERM 4590 4256472 - 4256460 - R 75 -9.1 -3.5891 | overlap 4256458 TTCTAGAAGGAAAGA GCCCT TGC AGGGC AATGCAGTAACTTAA Sde_3328 4256949 - 4256440 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Sde_3329 4257296 - 4256997 - | hypothetical protein Sde_3330 4257824 - 4257312 - | diguanylate cyclase/phosphodiesterase TERM 4591 4258176 - 4258126 - R 100 -12.7 -3.54744 | gap 1, opp_overlap 4258123 4258127, overlap 4258128 AAAAGAAAGGGATAA TATGCACCAAGCGCTTAACGCCGC TAAA GGGGCGTCAAACGCTAGGTG-ACA ATTAAGTTTTATTGC TERM 4592 4258176 - 4258128 - R 100 -15.4 -3.32471 | gap 1, opp_overlap 4258127 4258123, overlap 4258126 AAGAAAGGGATAATA TG-CACCAAGCGCTTAACGCCGC TAAA GGGGCGTCAAACGCTAGGTGACA ATTAAGTTTTATTGC Sde_3331 4259624 - 4258185 - | hypothetical protein Sde_3332 4261963 - 4259729 - | Outer membrane receptor proteins mostly Fe transport-like TERM 4593 4259949 - 4259934 - G 74 -5.4 -4.59853 | overlap 4259936 TTAAGCCGGTAAAAA TCGCCA ATGG TGGCAA AGTTGTGCTCGGCTA Sde_3333 4262612 - 4262085 - | hypothetical protein TERM 4594 4262122 - 4262151 + g 88 -7.9 -5.06816 | gap 1 AACTCCATAATGTCG CCGCGCAAGCCATG CAA TATG-CTTACGCGG TTTTTCTTCCAGCCT Sde_3334 4263754 - 4262687 - | lipoyl synthase Sde_3335 4264411 - 4263761 - | lipoate-protein ligase B TERM 4595 4264504 - 4264524 + r 73 -2.5 -5.09173 | AGCTATAAGTTACAT CACCATG CGCGTGC CAGGGTG TTTTTTAAGGTCTTC Sde_3336 4264770 - 4264498 - | hypothetical protein Sde_3337 4265944 - 4264763 - | penicillin-binding protein 6 TERM 4596 4265077 - 4265103 + g 70 -5.3 -4.46212 | overlap 4265080 TTGCATCGCTAATAG CCT-CACCTTCGT TGT AC-AAGGTGTAGG TTTTGTAATAACGGA Sde_3338 4266959 - 4266066 - | sugar fermentation stimulation protein Sde_3339 4268027 - 4267002 - | Zn-finger, DksA/TraR C4 type TERM 4597 4267791 - 4267801 + g 80 -5.4 -5.0538 | opp_overlap 4267791, overlap 4267787 ATTGCGGTACTCAAA CCAA GGT TTGG TTTTTTCCGCTGGGC Sde_3340 4269231 - 4268086 - | putative rod shape-determining protein RodA TERM 4598 4268395 - 4268361 - G 95 -7.8 -5.42605 | opp_overlap 4268391, overlap 4268391 TTAATAAAAATAAAA CGCCAAGTAAACCGAA CTC TTCGGCTAACACAGCG ATAATAAAATCGGTG TERM 4599 4268824 - 4268812 - G 77 -3.3 -5.1287 | opp_overlap 4268813, overlap 4268813 4268814 4268816 CTTAGAGCTAAAAAA CGCAG CCA CTGCT ATTGGCACGCCCAGC TERM 4600 4268979 - 4268959 - G 72 -8.9 -3.58905 | overlap 4268962 ACCCGCCACATATAA CCACGGCGC CCA GCGCCGCAA CATTTGCAAGTCTAG TERM 4601 4268976 - 4268962 - G 79 -12.8 -2.91997 | overlap 4268959 CGCCACATATAACCA CGGCGC CCA GCGCCG CAACATTTGCAAGTC Sde_3341 4271091 - 4269232 - | PAS/PAC sensor signal transduction histidine kinase / peptidoglycan glycosyltransferase TERM 4602 4269298 - 4269310 + g 70 -4.7 -4.43189 | GGCGGCGGGAATACC CGACG ATT CGCCG TTTTCTACAATTGCT TERM 4603 4270069 - 4270081 + g 72 -9.1 -3.59979 | overlap 4270064 TTCTAAACCTCCCAG GCCCA GCA TGGGC TTTACCGTGGAACCA TERM 4604 4270268 - 4270298 + g 79 -8.3 -4.23104 | gap 2 ATGGCCACCACTGCA CCGCGCTG-ATC-GC CAA GCTGCTCCAGCGCGG TTTGTTGCACTTTGC TERM 4605 4271027 - 4271007 - G 82 -3.2 -5.55664 | gap 1, overlap 4271009 CCAGCACGAAAAAAA GC-GCCACA AATA CGCGGCCGC CAAATACCCTAGCCT Sde_3342 4271574 - 4271107 - | response regulator receiver domain-containing protein Sde_3343 4271961 - 4271617 - | Poly(A) polymerase, PcnB Sde_3344 4272653 - 4271991 - | nicotinate-nucleotide adenylyltransferase Sde_3345 4273985 - 4272678 - | glutamate-5-semialdehyde dehydrogenase TERM 4606 4273176 - 4273192 + g 79 -7.9 -4.46404 | overlap 4273163 4273178 TTCCATTGCGTTGCA CACACCG TAA CGGTGGG TTTTACTGTTAATTA Sde_3346 4275052 - 4274048 - | ketopantoate hydroxymethyltransferase Sde_3347 4276607 - 4275054 - | hypothetical protein TERM 4607 4275219 - 4275192 - G 80 -10 -3.93262 | gap 1, overlap 4275186 CCCAATAAAGTTAAA GGTGATATGACGC ACC ACGTCAT-TCACC ATCAAGCCGTAGGCT Sde_3348 4277380 - 4276616 - | deoxyxylulose-5-phosphate synthase Sde_3349 4277571 - 4278236 + | phosphatase/phosphohexomutase-like TERM 4608 4278242 - 4278229 - T 100 -9.5 -4.88736 | opp_overlap 4278229 CACTAGTGACAAAAA GCGCC TAAT GGCGC TTTCTCAAGCAGGAC TERM 4609 4278229 - 4278242 + T 81 -9.5 -3.85698 | opp_overlap 4278229 CACTAGTGACAAAAA GCGCC TAAT GGCGC TTTCTCAAGCAGGAC Sde_3350 4279153 - 4278257 - | ferrous iron transport protein B TERM 4610 4279138 - 4279117 - G 72 -8.7 -3.68222 | overlap 4279120 GGCCAATTGCAACAA TTACTCCCC AATA GGGGAGAAA ATGAATATTGAACAC TERM 4611 4279135 - 4279120 - G 73 -10.4 -2.94759 | overlap 4279117 CAATTGCAACAATTA CTCCCC AATA GGGGAG AAAATGAATATTGAA TERM 4612 4279243 - 4279231 - H 73 -5.5 -4.61231 | overlap 4279232 CCATAGTCTGAAAAA CGCGT CTA ACGCA ACAGGAGCCAAACAT Sde_3351 4279257 - 4279814 + | histidine kinase TERM 4613 4280150 - 4280132 - g 70 -2.2 -5.00616 | TGTTGCGCCAAAAAA GCGGGGGC ATT ACCCAAGC CCAAGCAGCGCAAAT Sde_3352 4279891 - 4280307 + | hypothetical protein TERM 4614 4280430 - 4280417 - g 70 -9.5 -3.01726 | overlap 4280416 GTTTGTTATAGAAAG CGCCG AAGA CGGCG AGGAAGGACTTTACC TERM 4615 4280660 - 4280673 + G 79 -9.5 -3.73647 | opp_overlap 4280652 AGAAGAATTGCGCGC GCGCG CCAA CGCGC TTATTCGTCGCTCGG TERM 4616 4280952 - 4280931 - g 78 -5.1 -5.00884 | overlap 4280932 4280934 4280936 AGGCTGCGTAAAAAA CTAGACCCC GACG GGGACCTAA AACCCATCAAAACTG Sde_3353 4280331 - 4281008 + | response regulator receiver domain-containing protein TERM 4617 4281049 - 4281029 - f 78 -10.4 -3.25717 | overlap 4281027 4281025 AGTACAGACAATACA GGCGCGTC TACGC AACGCGCC GCAGCTCTTTCAACC TERM 4618 4281482 - 4281496 + G 72 -2.8 -5.0065 | TATTCAAACCGAGCT TAGTGG CAG CCAATA TTTTGTTTATAACTA TERM 4619 4281679 - 4281692 + G 70 -9.5 -3.11634 | GGCTTATAGTGCGCT GGGGC TTGC GCCCC TTAGCTGGTCTCGCC TERM 4620 4281852 - 4281842 - g 76 -4.6 -4.99861 | opp_overlap 4281842 CACCAAGTATAAAAA CACC CTT GGCG ATTTGGCCCACAGCC Sde_3354 4281093 - 4282463 + | ribose 5-phosphate isomerase TERM 4621 4282706 - 4282721 + G 76 -9 -3.70919 | CAGCTGCTTGTAACC CTACCG TTTT CGGTAG TTATTGAACTTTCGC Sde_3355 4282478 - 4282855 + | hypothetical protein Sde_3356 4283309 - 4282920 - | hypothetical protein Sde_3357 4285924 - 4283306 - | putative integral membrane protein TERM 4622 4285197 - 4285170 - G 70 -10 -3.02386 | gap 1, overlap 4285165 ATAAAACTAATCATA TCGGCGGTAATCA TGG TGA-TACCGCCAA CAAATATTTGCGCCT TERM 4623 4285731 - 4285719 - G 77 -3.3 -5.2189 | GTAACTACCAAAAAA TCGCC GGA GTCGA AGCGCTTGGAAATCT Sde_3358 4286572 - 4286252 - | hypothetical protein Sde_3359 4286986 - 4287861 + | hypothetical protein Sde_3360 4288582 - 4287950 - | putative aromatic acid decarboxylase TERM 4624 4288088 - 4288109 + g 70 -5.1 -4.431 | opp_overlap 4288058 CAATATAACTGCCCC CATGCGCGA CAAC TTGAGCATG TTTTCTAAATGGATA Sde_3361 4289942 - 4288575 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase Sde_3362 4290249 - 4291382 + | hypothetical protein TERM 4625 4291586 - 4291572 - g 74 -3.5 -4.99035 | CTAGCGATATAAAAA GCTCG GTACT CAAGC CCTACTTTAGCTCTA TERM 4626 4292957 - 4292947 - g 72 -8.2 -3.65902 | GCTAGCCTACCTAAA CCGG CTG CCGG TAAACGCACTTAAAA Sde_3363 4291382 - 4293232 + | diguanylate cyclase/phosphodiesterase Sde_3364 4293307 - 4293843 + | inorganic diphosphatase TERM 4627 4293871 - 4293901 + T 100 -13.3 -3.73072 | opp_overlap 4293877, overlap 4293877 GCAGTAACACTTACA CGTAAAGGGCGCC CTAGT GGCGCCCTTTTTG TTTAATCCGCCAGTT TERM 4628 4293895 - 4293877 - T 100 -13.1 -3.72141 | opp_overlap 4293877 4293871 ACACTTACACGTAAA GGGCGCC CTAGT GGCGCCC TTTTTGTTTAATCCG TERM 4629 4293877 - 4293895 + T 100 -13.1 -5.33405 | opp_overlap 4293877, overlap 4293871 ACACTTACACGTAAA GGGCGCC CTAGT GGCGCCC TTTTTGTTTAATCCG Sde_3365 4294652 - 4293903 - | hypothetical protein TERM 4630 4294967 - 4294981 + H 70 -2.8 -5.02074 | AGTTTGCTCGCCTAT CGTC AAAGGGA GACG TTTTTTAAAGGATAA Sde_3366 4295000 - 4295323 + | hypothetical protein Sde_3367 4295988 - 4295362 - | isochorismate synthase Sde_3368 4296657 - 4295998 - | putative D,D-carboxypeptidase-related protein Sde_3369 4297215 - 4297493 + | TonB-like Sde_3370 4297632 - 4297946 + | Rieske family iron-sulfur cluster-binding protein Sde_3371 4298651 - 4297950 - | sugar fermentation stimulation protein TERM 4631 4298728 - 4298744 + H 81 -9.5 -3.80625 | ACGCTTTGTTTTTCC GCCAATT TAT AATTGGC TTTGAATTGTGGGCA Sde_3372 4298812 - 4299249 + | TraR/DksA family transcriptional regulator TERM 4632 4299272 - 4299287 + F 100 -10.4 -5.63517 | GCGGTTATCGATCTA GGGTGC TTTG GCACCC TTTTTTGTTTGCGCC TERM 4633 4299548 - 4299519 - g 71 -3.5 -4.82901 | gap 1, opp_overlap 4299536 TCTTGCTTACAAAAA CACG-GGCTGCAGT GGG ACGACAGCGACGTG ATGTTTCAAAGCACA Sde_3373 4299318 - 4300214 + | glutamate--tRNA ligase Sde_3374 4300485 - 4303487 + | two-component sensor kinase CbrA TERM 4634 4304215 - 4304227 + G 72 -10.5 -2.79912 | overlap 4304213 4304211 AAGGTTTGGTTTCGG CCGCC GAT GGCGG TACATTGTTTTTAGA TERM 4635 4304941 - 4304927 - g 74 -5.6 -4.57073 | TATCCCCCGCAAAAA GCCTAC CCA GTCGGC AACAACCGACTAAAC Sde_3375 4303536 - 4304954 + | two-component response regulator CbrB TERM 4636 4304993 - 4305044 + F 79 -11.1 -2.93853 | gap 2, opp_overlap 4304993 4305009, overlap 4304992 4305008 GTTGTAAAAAATTAC TGCCCTTATGGGAACATTCGGCGCT TTAT GGCGTCGAA-GTTCCTGTGAGG-CA TGGTTTCACCTGTGT TERM 4637 4305554 - 4305574 + F 100 -11.2 -4.67038 | TAAAAATATATTTGG CGGGAAAG CATGT CTTTCCCG TTTTAGTTTTCCCCC TERM 4638 4306277 - 4306289 + G 79 -10.5 -3.53224 | CCCCGTGCGTTTACT GCGCG CCG CGCGC TTTGCCGGCAAGCTG Sde_3376 4305690 - 4307021 + | poly(A) polymerase Sde_3377 4307021 - 4307539 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase TERM 4639 4307953 - 4307912 - g 74 -8.7 -3.97368 | overlap 4307914 4307948 TTTTTAATCGATAAA GATCGCCTGTTCGCCGAGG TTAC CCTCGACGAAGAAGCCATG CGCCTGTACGACCAA TERM 4640 4307951 - 4307914 - g 82 -11.3 -3.57808 | overlap 4307912 4307948 TTTAATCGATAAAGA TCGCCTGTTCGCCGAGG TTAC CCTCGACGAAGAAGCCA TGCGCCTGTACGACC Sde_3378 4307603 - 4308295 + | DNA polymerase III, epsilon subunit Sde_3379 4308309 - 4309121 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Sde_3380 4309277 - 4311898 + | phosphoenolpyruvate carboxylase TERM 4641 4311940 - 4311913 - f 100 -18.4 -3.73402 | opp_overlap 4311913 ACACCGCCTATCAAA CCGCTCGCGTGC ACCG GCGCGCGAGCGG TTTCCTCCCCAATTA TERM 4642 4311913 - 4311940 + F 100 -20.6 -3.737 | opp_overlap 4311913 ACACCGCCTATCAAA CCGCTCGCGTGC ACCG GCGCGCGAGCGG TTTCCTCCCCAATTA TERM 4643 4312985 - 4312963 - g 76 -7.6 -4.21908 | overlap 4312964 CATCATTACTCAAAA GGGCAAGGGT TTT ACCCCCGCCG AAAAAGACCCTGTTG TERM 4644 4312984 - 4312964 - g 77 -11.1 -3.12663 | overlap 4312963 ATCATTACTCAAAAG GGCAAGGGT TTT ACCCCCGCC GAAAAAGACCCTGTT TERM 4645 4313122 - 4313098 - g 74 -3.7 -4.94972 | gap 1, overlap 4313099 4313100 4313107 TAGCACAATTAAAAA GCCCAAATAC CAAACC GTATTTGG-C GACTGGTTATGCGAT TERM 4646 4313834 - 4313821 - g 93 -9.5 -4.64334 | overlap 4313823 AACCCTCGAAGAAAA CGCCG TCGC CGGCG GTGCGGGTGCAGGCG Sde_3381 4312100 - 4314049 + | 1-deoxy-D-xylulose-5-phosphate synthase Sde_3382 4314308 - 4314535 + | ferrous iron transport protein A Sde_3383 4314547 - 4316598 + | ferrous iron transport protein B TERM 4647 4316619 - 4316646 + T 72 -7.8 -3.82218 | gap 1, opp_overlap 4316619 4316621, overlap 4316622 TTATTACACACTTAA TACGCGACCCG TTAATTT CGGGTCGC-TA TTTACTGCTCTGCCT TERM 4648 4316622 - 4316644 + T 91 -12 -3.49482 | opp_overlap 4316621 4316619, overlap 4316619 TTACACACTTAATAC GCGACCCG TTAATTT CGGGTCGC TATTTACTGCTCTGC Sde_3384 4318933 - 4316648 - | Signal transduction histidine kinase-like TERM 4649 4317370 - 4317396 + g 76 -8.1 -4.15508 | gap 1, overlap 4317392 TTGCATCTTTGGCTA CCTGTAGCGCTT CTTC GAGCGCTA-AGG TTTTCACCCTTACTT TERM 4650 4318873 - 4318862 - G 77 -3.6 -5.09426 | overlap 4318864 GGGAATTGTAAAAAA GCCA GCGG CGGC ACCGAGAAGCCAGTA TERM 4651 4319010 - 4318997 - R 91 -6.7 -5.5208 | GCACAAGATAAAAAA CTAGC CGGC GCTAG CTTAACGGGTATAAA TERM 4652 4319028 - 4319051 + r 71 -9.5 -2.96695 | opp_overlap 4319029, overlap 4319025 TAACGGGTATAAAAA AGCCGGTGG GGAAAG CCACCGGCC TAGTTTAATCACACA TERM 4653 4319050 - 4319029 - R 100 -13 -5.25803 | opp_overlap 4319028 4319025 AACGGGTATAAAAAA GCCGGTGG GGAAAG CCACCGGC CTAGTTTAATCACAC Sde_3385 4319987 - 4319082 - | aldo/keto reductase family oxidoreductase Sde_3386 4321541 - 4320030 - | L-threonine ammonia-lyase TERM 4654 4320877 - 4320863 - G 78 -6.4 -4.56597 | overlap 4320865 CGCCCTCGGCAAAAA TACCCA CAC TGGGCA ACACCGCACGGCGTT TERM 4655 4320933 - 4320918 - G 70 -9 -3.41222 | overlap 4320916 TGCCAATTTTAAACA GGCAGA ATCT TCTGCC TCCACCGCTATGACC Sde_3387 4321711 - 4322391 + | ribose-5-phosphate isomerase A TERM 4656 4322777 - 4322788 + G 73 -4.4 -4.89477 | TGGCAGAACTGGTTA TTGC TGAA GCAA TTTTATTATTGCGCG TERM 4657 4322864 - 4322852 - g 81 -4.7 -5.09426 | opp_overlap 4322852 GTGAATGGCAAAAAA GTGCC GAG GGCTC TTTCGAGATTCGCGG Sde_3388 4322422 - 4323657 + | D-3-phosphoglycerate dehydrogenase TERM 4658 4323721 - 4323690 - f 81 -11.1 -3.30956 | gap 1, opp_overlap 4323698, overlap 4323698 ACAATTAATCACCAA CATAAAAACCGGTC TTAAT GACCGGTTTTT-TG TAACGGCTATTCGCA TERM 4659 4323698 - 4323714 + F 100 -9.4 -5.24531 | opp_overlap 4323690 4323698 TCACCAACATAAAAA CCGGTC TTAAT GACCGG TTTTTTGTAACGGCT TERM 4660 4323714 - 4323698 - f 100 -9.4 -5.1244 | opp_overlap 4323698, overlap 4323690 TCACCAACATAAAAA CCGGTC TTAAT GACCGG TTTTTTGTAACGGCT Sde_3389 4323795 - 4324079 + | hypothetical protein Sde_3390 4324112 - 4324507 + | hypothetical protein Sde_3391 4324583 - 4324807 + | hypothetical protein Sde_3392 4324825 - 4325106 + | methyl-accepting chemotaxis sensory transducer Sde_3393 4325861 - 4325115 - | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase TERM 4661 4325572 - 4325590 + g 74 -8.2 -3.9712 | overlap 4325587 ACATTAAAAGTGTGT TGCCATTT TTC GAATGGCA TTTCTAATAAACTGC TERM 4662 4325698 - 4325721 + g 72 -5.3 -4.58076 | opp_overlap 4325675 4325683, overlap 4325714 GCCACGTGTTTCTCG TCGGCAATA TCTACC TCTTGCCGA TTTTCTGTAAGTTGT TERM 4663 4325816 - 4325836 + g 78 -6.7 -4.63486 | overlap 4325818 GGCCAATACCTTGTT TAGCGCCGG TAA CCAGCGCAA TTTTATTAACAAAAT Sde_3394 4327126 - 4325861 - | GGDEF TERM 4664 4326170 - 4326157 - G 76 -2.3 -5.33985 | CGGAAAAAAAACAAA GCGAG AATA CTGGC TTAAAAGCAATAAAC TERM 4665 4326611 - 4326594 - G 77 -3.3 -5.10516 | gap 1, overlap 4326595 AAAAACCAAATAAAA GGCAGCAG CAG CAGC-GCC ACAAAATAAATAGTA Sde_3395 4328017 - 4327130 - | vibriobactin utilization protein ViuB TERM 4666 4327492 - 4327479 - G 70 -5.3 -4.38712 | overlap 4327484 GGTACCTCTATAAAA GCTAA CCCT TTAGC CGTAACGGGCAGCTC Sde_3396 4330436 - 4328007 - | putative non-ribosomal peptide synthetase TERM 4667 4328467 - 4328486 + g 71 -10.7 -2.63257 | opp_overlap 4328465 4328464, overlap 4328464 4328463 TTGCGCTGTAAACTG GCACGGG CGATTA CCCGTGC TACATTATCTACGCT TERM 4668 4330200 - 4330233 + g 72 -8.2 -3.78775 | overlap 4330202 AGCAACTGCACGCCC CGCCAATGGCGTAC CTATAT GTACGTCATTGGTA TTTAGTGCTGCCACG TERM 4669 4330202 - 4330231 + g 90 -13 -3.48024 | overlap 4330200 CAACTGCACGCCCCG CCAATGGCGTAC CTATAT GTACGTCATTGG TATTTAGTGCTGCCA Sde_3397 4332679 - 4330475 - | putative non-ribosomal peptide synthetase TERM 4670 4331389 - 4331371 - G 73 -10.2 -3.04203 | overlap 4331368 TCAACTCAGAAAGTA GCGCCTGC AGC GCAGGCTC TGAATATAAATGGGC TERM 4671 4331866 - 4331879 + g 79 -3.1 -5.32565 | gap 1 GCCAGGTTGTACCGA GC-TGC AAA GCAAGC TTTTTTAATTGATTA Sde_3398 4333631 - 4332672 - | alkylhydroperoxidase AhpD core TERM 4672 4332761 - 4332731 - G 70 -9.6 -3.11768 | GTAGAGCACCCAACA TTGCAGCCCAAGCT TTT AGCGTGGGCTGCTC GGCAAGTTCGGCAAA TERM 4673 4333106 - 4333081 - G 73 -2.5 -5.18726 | overlap 4333083 TCCGTAGAAGAAAAA TCTGCAACGGC ATCG GCCACCACAAA CGCTTTGATATCGGT Sde_3399 4335370 - 4333679 - | 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E) TERM 4674 4334225 - 4334239 + g 72 -2.8 -4.99568 | AACCACTGGCGTATC GTCGTT AGC AACAAC TTTTATTTCGTCTTC TERM 4675 4334385 - 4334404 + g 71 -7.2 -4.07568 | ATGGCCACTATTTGC TTAGCCAG CACA CTGGTTAA TTTTGCGCCGCCAAC Sde_3400 4336628 - 4335363 - | isochorismate synthase; RBL00457 Sde_3401 4336899 - 4337627 + | phosphopantetheinyl transferase TERM 4676 4337635 - 4337617 - T 100 -10.2 -5.28778 | opp_overlap 4337617 AGCAGGCACAAAAAA GCCGCGAT TAG AACGCGGC TTTTTTAAATATAAA TERM 4677 4337617 - 4337635 + T 100 -10.2 -5.1287 | opp_overlap 4337617 AGCAGGCACAAAAAA GCCGCGAT TAG AACGCGGC TTTTTTAAATATAAA Sde_3402 4338961 - 4337666 - | hypothetical protein TERM 4678 4338225 - 4338236 + g 80 -7.2 -4.56597 | overlap 4338224 TTTGGCCGCTCAACC GGCG CAGG CGCC TTTTTAGGAACAACA Sde_3403 4340004 - 4338973 - | hypothetical protein TERM 4679 4339484 - 4339497 + g 70 -2.4 -5.00616 | opp_overlap 4339484 GCAACTTGCACATTA GTAG AGGCCG CTAC TTTTTTACGGGCCAA TERM 4680 4339865 - 4339882 + g 78 -6.3 -4.6759 | ACTTTCTTAGTGAGT GCAGCAA GCTC TTGTTGC TTTTGTTGCAGTGTT Sde_3404 4340097 - 4340336 + | hypothetical protein TERM 4681 4341679 - 4341693 + G 71 -7.1 -4.05788 | opp_overlap 4341658 4341655 4341679 4341678 CGACAACAGCAATAC CGCAC TCGAT GTGCG TTTAATTTCGAAGGG TERM 4682 4342001 - 4341982 - g 71 -10 -3.14468 | gap 1 CGGCAGCACATTTAA CCCAG-GCG AGA CGCTCTGGG GCGGTAAAATGGCGC Sde_3405 4340660 - 4342804 + | outer membrane protein TERM 4683 4342855 - 4342813 - f 77 -6.3 -4.67607 | gap 1, overlap 4342809 4342815 4342817 4342818 CTTTTAACAAATAAA CACAGCTATGTTTACCCGCA ATTG CGCGGGTAAACAT-GTAGAG GTAGCACATGAAACT TERM 4684 4342853 - 4342815 - f 72 -7.5 -3.94772 | gap 1, overlap 4342809 4342813 4342817 4342818 TTTAACAAATAAACA CAGCTATGTTTACCCGCA ATTG CGCGGGTAAACAT-GTAG AGGTAGCACATGAAA TERM 4685 4342851 - 4342817 - f 73 -8.7 -3.54574 | gap 1, overlap 4342809 4342815 4342813 4342818 TAACAAATAAACACA GCTATGTTTACCCGCA ATTG CGCGGGTAAACAT-GT AGAGGTAGCACATGA TERM 4686 4342850 - 4342818 - f 83 -12.2 -2.71118 | gap 1, overlap 4342809 4342817 4342815 4342813 AACAAATAAACACAG CTATGTTTACCCGCA ATTG CGCGGGTAAACAT-G TAGAGGTAGCACATG Sde_3406 4342863 - 4343114 + | histidine kinase Sde_3407 4343111 - 4343737 + | response regulator receiver domain-containing protein TERM 4687 4343762 - 4343750 - g 74 -5.5 -4.58563 | TAATGACAAAAATAA GCCTG CTA CAAGC ACTTACGCAATGGCA Sde_3408 4343737 - 4344528 + | aminoglycoside phosphotransferase-like TERM 4688 4344590 - 4344571 - T 72 -10 -2.82635 | ATGTGCATTACTACA CGCAAGGC AAAT ACCTTGCG TGAATAGCAAAATTA Sde_3409 4344920 - 4344603 - | hypothetical protein Sde_3410 4345479 - 4345030 - | hypothetical protein TERM 4689 4345540 - 4345550 + r 71 -4 -4.82901 | ACTAGCAGTTATTGC TTTG CTA CAAA TTTTTCTAACAGGCC Sde_3411 4346180 - 4345533 - | DNA-directed DNA polymerase TERM 4690 4345878 - 4345861 - G 72 -2.7 -5.08824 | opp_overlap 4345861 TCGGCATCTAAAAAA CGCTT ATCGAACG AAGCG TTATGAGCCACAAGA Sde_3412 4346578 - 4346246 - | ATPase Sde_3413 4346850 - 4346599 - | hypothetical protein TERM 4691 4346907 - 4346877 - R 73 -8.2 -3.695 | opp_overlap 4346886, overlap 4346875 4346879 4346898 TTGTAAAAGGAAATA TACGGCCACAGGCC GGA GGAATGCGGCCATA TTAACAGAGTTAACT TERM 4692 4346891 - 4346879 - R 80 -10.5 -3.41795 | opp_overlap 4346886, overlap 4346877 4346875 GTAAAAGGAAATATA CGGCC ACA GGCCG GAGGAATGCGGCCAT Sde_3414 4347551 - 4346961 - | hypothetical protein Sde_3415 4348171 - 4347548 - | Pectate lyase/Amb allergen Sde_3416 4348757 - 4348206 - | hypothetical protein TERM 4693 4348622 - 4348640 + g 73 -11 -2.57881 | overlap 4348621 TATCGAGCGCGCTTA CCCAGTCG TCG CGATTGGG GTTATCCCACGCTTG Sde_3417 4349073 - 4348786 - | GTP cyclohydrolase II Sde_3418 4349669 - 4349136 - | hypothetical protein TERM 4694 4349323 - 4349309 - G 74 -7 -4.23674 | TGGTAGGAATATAAA CCGCTG CGT CGGCGG CATCAATAATACTTT TERM 4695 4349605 - 4349623 + g 73 -10.2 -3.11178 | opp_overlap 4349604 4349603 GCAGCACGCATAATT GCCCCAAC ATT GGTGGGGC TCTTAGGGTTAATTA TERM 4696 4350243 - 4350228 - g 74 -10.4 -3.2963 | overlap 4350241 AGCACTCTCGCACAA CGCTGG CAAG CCAGCG CCGAGCAACAACAAA TERM 4697 4350760 - 4350742 - g 70 -2.3 -5.04601 | TGTACAAACTAAAAA GCCTCGC AGTAA GCAATGC GATAGTGGAGTGGCC TERM 4698 4352312 - 4352298 - g 71 -7.8 -3.90588 | opp_overlap 4352301 4352302, overlap 4352285 TACGCTTTAACCAAA GCGCTG GCG CAACGC CCCAATTTACAGCTT Sde_3419 4349835 - 4352783 + | hypothetical protein TERM 4699 4352842 - 4352817 - T 100 -16.1 -5.32882 | opp_overlap 4352816 4352814 4352817 4352833 GACGACCATAAAAAA GCCGGCCCCAC TTGC GCAGGGCCGGC CTCTGTTTACTTAAA TERM 4700 4352817 - 4352842 + T 80 -11.7 -2.60199 | opp_overlap 4352817, overlap 4352816 4352814 4352833 GACGACCATAAAAAA GCCGGCCCCAC TTGC GCAGGGCCGGC CTCTGTTTACTTAAA Sde_3420 4355077 - 4352900 - | thiamine-monophosphate kinase TERM 4701 4353638 - 4353625 - G 72 -5.3 -4.56775 | opp_overlap 4353625 ATGGTTCGTTAAAAA TATCG ATAC CGATA ATATTATCAACGCCC TERM 4702 4354124 - 4354151 + g 71 -7 -4.13014 | opp_overlap 4354127 4354132, overlap 4354127 4354134 CATGTTGCCAACATA TAATTCAAGCGG CGCA CCGCCTGGGTTA TTTTGCGCATCTGAA TERM 4703 4354912 - 4354925 + g 74 -8.1 -3.85698 | opp_overlap 4354912, overlap 4354919 CGGTCCAGCCACTAA CAGCG CTAC CGCTG TTTGTAACACGAACA Sde_3421 4355881 - 4355690 - | NusB antitermination factor TERM 4704 4355789 - 4355771 - G 84 -5.2 -5.42131 | opp_overlap 4355775, overlap 4355777 TAACGAGATAAAAAA CCACAACA AAC CGCTGCGG TTTTTACTTTGCGCC Sde_3422 4356777 - 4355902 - | response regulator receiver domain-containing protein TERM 4705 4357130 - 4357147 + G 71 -6.9 -4.15832 | opp_overlap 4357132 ATGCTGTGGTCTAAT CAGTGGC GAAT GCCTCTG TTATTTATAATTAGT TERM 4706 4357189 - 4357207 + G 76 -8.8 -3.72893 | TTCGTTTCAGCTTGC TCGCGAGC CAA GCTGGCGA TTTGCTACAGGGATA Sde_3423 4356947 - 4358149 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4707 4358228 - 4358191 - T 72 -7.2 -3.91506 | gap 1 GGAGGGGTAAAAACA CACCAAAGTTAGCATCC ATTTA AG-TACTAACTTTGGCG ACAGTATTTGTATTG TERM 4708 4358645 - 4358635 - T 75 -3.2 -5.08601 | CGAGCTCAATAAAAA TGCA TAA CGCA GTGCTTGAAACATCA Sde_3424 4359792 - 4358674 - | Lumazine-binding protein Sde_3425 4361212 - 4359956 - | putative methyl-accepting chemotaxis sensory transducer TERM 4709 4360701 - 4360675 - G 79 -11.6 -3.16564 | opp_overlap 4360674 4360672 4360670 4360675 CTGTCATTTCATTAA CGGCCACCGATA TAC TATCTGTAGCCG TTAACTGATTGCCAG TERM 4710 4361496 - 4361523 + G 72 -9.2 -3.6502 | gap 1, overlap 4361497 4361498 GGCACAGACTTACTC TA-CGCCGCCATT ACC AAAGGCGGCGGTA TTTACGTACACCATA TERM 4711 4361497 - 4361521 + G 73 -9.9 -3.40597 | overlap 4361496 4361498 GCACAGACTTACTCT ACGCCGCCATT ACC AAAGGCGGCGG TATTTACGTACACCA TERM 4712 4361498 - 4361520 + G 81 -13.4 -2.64144 | overlap 4361497 4361496 CACAGACTTACTCTA CGCCGCCATT ACC AAAGGCGGCG GTATTTACGTACACC TERM 4713 4361853 - 4361869 + G 70 -2.1 -4.95618 | TCTATTGGCGCGGGC GCGCTGG GAA CCGTTGC TTTATTTTTGCTGTT Sde_3426 4361349 - 4362131 + | hypothetical protein Sde_3427 4363351 - 4362245 - | putative diguanylate cyclase (GGDEF) Sde_3428 4364215 - 4366377 + | hypothetical protein TERM 4714 4366434 - 4366455 + T 100 -10.9 -5.43621 | opp_overlap 4366434 TATATTTTCCCAAAA GCCCACAGA AATA TTTGTGGGC TTTTTTGTGGTTTAT TERM 4715 4366455 - 4366434 - T 83 -8.7 -4.09243 | opp_overlap 4366434 TATATTTTCCCAAAA GCCCACAGA AATA TTTGTGGGC TTTTTTGTGGTTTAT Sde_3429 4367986 - 4367048 - | LysR family transcriptional regulator TERM 4716 4367807 - 4367765 - G 74 -5.7 -4.68994 | overlap 4367766 AGCACTATTGAAAAA GCGC-CTACCCGATTCGGT TAGCCGT ACCAAA-CGGGTAGTGCGG TTAAACAATTTGACG TERM 4717 4367806 - 4367766 - G 70 -9.2 -3.40674 | overlap 4367765 GCACTATTGAAAAAG CGC-CTACCCGATTCGGT TAGCCGT ACCAAA-CGGGTAGTGCG GTTAAACAATTTGAC TERM 4718 4368366 - 4368353 - g 72 -5.3 -4.57073 | TATCTGGCCGAAAAA TTTCC AGCG GGAAA AAAGCTATTACCCAG TERM 4719 4368497 - 4368487 - g 74 -5.4 -4.7064 | AACAAAAAATATAAA CGTA AAC TACG CCAAACAACGCTTTA Sde_3430 4368116 - 4368772 + | putative glutathione S-transferase TERM 4720 4369383 - 4369399 + G 87 -9.5 -4.254 | opp_overlap 4369383 ACGGTAAACCAACAA TTAGGCA GTG TGCCTAA TTTGTTCCGTATTAC TERM 4721 4369399 - 4369383 - g 80 -9.5 -3.89756 | opp_overlap 4369383 ACGGTAAACCAACAA TTAGGCA GTG TGCCTAA TTTGTTCCGTATTAC Sde_3431 4369302 - 4369853 + | hypothetical protein TERM 4722 4369880 - 4369865 - f 93 -11.8 -3.63569 | TTAACTCGCTAACAA GCCGCC ATTA GGCGGC ATCAACTTGTTACTA Sde_3432 4369913 - 4370377 + | hypothetical protein Sde_3433 4370416 - 4371060 + | glutathione S-transferase family protein TERM 4723 4372126 - 4372138 + G 74 -5.5 -4.66938 | overlap 4372124 4372127 GATAAAGGAAAGCCG TGACG TTA CGTCG TTTTATATTAGGCCT TERM 4724 4372782 - 4372769 - g 75 -6.7 -4.41177 | TATACAAATTTAAAA GCGAT GGGT ATCGC TGAATCTAGAATATT TERM 4725 4372961 - 4372947 - g 72 -2.8 -5.01732 | opp_overlap 4372947, overlap 4372949 AATTTGCCGAAAAAA TGGGTT TAA AACCAA TGTATAGCTGTCGCA Sde_3434 4371101 - 4373125 + | oxidoreductase, FAD-binding Sde_3435 4374684 - 4374220 - | hypothetical protein TERM 4726 4374735 - 4374750 + r 78 -7.5 -4.44448 | opp_overlap 4374733 4374735 TATTCTTGTACAACA CGGCG CATATT CGCCG TTTCTTTAAACTAAT Sde_3436 4375767 - 4375222 - | hypothetical protein Sde_3437 4375952 - 4377325 + | esterase/lipase/thioesterase family protein TERM 4727 4377373 - 4377412 + T 71 -4.5 -4.58466 | opp_overlap 4377379, overlap 4377379 AACTGAGTAGTCATT TTAA-AAGCAGTGCCAGTT TTTG AGC-GGCACTGCTTATTCA TTTTATGCTTGTGCA TERM 4728 4377379 - 4377405 + T 83 -9.5 -3.9978 | gap 1, opp_overlap 4377379, overlap 4377373 GTAGTCATTTTAAAA GCAGTGCCAGTT TTTG AGC-GGCACTGC TTATTCATTTTATGC TERM 4729 4377405 - 4377379 - T 83 -8.7 -4.14739 | opp_overlap 4377379 4377373 GTAGTCATTTTAAAA GCAGTGCCAGT TTTTG AGCGGCACTGC TTATTCATTTTATGC Sde_3438 4378515 - 4377415 - | intracellular protease/amidase-like Sde_3439 4379883 - 4378609 - | Signal transduction histidine kinase-like TERM 4730 4379474 - 4379460 - G 79 -2.8 -5.42259 | opp_overlap 4379469 GCAGCCCTAAAAAAA CGATAA CAT TTAGCG GCAGGTTTCTTACCG Sde_3440 4380613 - 4379873 - | response regulator receiver domain-containing protein Sde_3441 4381213 - 4380686 - | putative acetyltransferase Sde_3442 4381808 - 4381311 - | hypothetical protein Sde_3443 4381871 - 4382302 + | hypothetical protein TERM 4731 4382344 - 4382320 - T 70 -9.3 -2.73542 | opp_overlap 4382317 4382314, overlap 4382303 GCTAACTTCTAATTA CTAGCCGCTAG TTA CTAGCGATTAG CAATTCATTACTATT Sde_3444 4382999 - 4382355 - | arylesterase TERM 4732 4382820 - 4382806 - G 70 -10 -2.99593 | overlap 4382805 ACCTCATAATTAAAC CCTTGC GCC GCAAGG CGTTGAACCAATAAA TERM 4733 4382976 - 4382966 - G 77 -6.8 -4.42238 | CTACGCCAAGTAAAA CCAC TAA GTGG CGCGCGAAACCGTTC Sde_3445 4383161 - 4383841 + | ABC transporter, ATP-binding protein TERM 4734 4384166 - 4384156 - g 77 -6.8 -4.38154 | ATATCGGCCACAAAA GCTG TTG CAGC TAGCTACCCACTAAA TERM 4735 4385615 - 4385625 + G 72 -8.2 -3.80279 | opp_overlap 4385609 AAACCAACACCCCGC GCCC ACA GGGC TTGTATGTTTCTGCA Sde_3446 4383850 - 4386336 + | ABC transporter, permease protein, putative TERM 4736 4388432 - 4388422 - g 72 -8.2 -3.76413 | opp_overlap 4388421 4388422 4388426 CGCTAAAAGGTGAAA GCCG CGA CGGC GTTGTTATTCATTAC TERM 4737 4388903 - 4388883 - g 76 -4.7 -4.79174 | AGCGAATTAACAAAA GCTACCG GCGTAAA CGGTAAC GAAATTGGCGATGGC Sde_3447 4386669 - 4389914 + | pectin methylesterase-like TERM 4738 4389982 - 4389959 - f 88 -11 -3.89524 | opp_overlap 4389961, overlap 4389961 ATTTCAGCCTACAAA TACCGAGAGC CTAG GCTCTCGGTT TTTACTTAAAGGCCA TERM 4739 4389980 - 4389961 - f 100 -13.6 -3.53733 | opp_overlap 4389961, overlap 4389959 TTCAGCCTACAAATA CCGAGAGC CTAG GCTCTCGG TTTTTACTTAAAGGC TERM 4740 4389961 - 4389980 + F 100 -13.6 -4.8622 | opp_overlap 4389961 4389959 TTCAGCCTACAAATA CCGAGAGC CTAG GCTCTCGG TTTTTACTTAAAGGC TERM 4741 4390291 - 4390259 - g 73 -9.8 -3.37487 | gap 1, opp_overlap 4390265 4390274, overlap 4390257 CCAGAGGGCGAAACA GCCGACGCAACC-GC AGAT GCTGGCTTCGCCGGC CACAATTTTAATCTT TERM 4742 4390605 - 4390581 - g 79 -9.3 -4.11394 | opp_overlap 4390580 4390579 ACCTTACTTTTAAAA GCGTCCTTACC GAA GGTAAAGATGC AATTAGTATAGAAGG Sde_3448 4390043 - 4391827 + | Pectate lyase-like TERM 4743 4391846 - 4391873 + F 100 -13.4 -5.00616 | opp_overlap 4391846 CTGCCATTTTAAAAA GCCCCGCTTTGG TGAC CTGAGGCGGGGC TTTTTTACGCCCACA TERM 4744 4391873 - 4391846 - f 86 -7.6 -4.62069 | gap 1, opp_overlap 4391846 CTGCCATTTTAAAAA GCCCCG-CTTTGG TGA CCTGAGGCGGGGC TTTTTTACGCCCACA TERM 4745 4391913 - 4391896 - f 84 -5.5 -5.36441 | opp_overlap 4391897, overlap 4391897 CGCCCACATAAAAAA TTTGCGC CAAA GCGCAAT CATTCACACACTTTT TERM 4746 4391912 - 4391897 - f 78 -9 -3.81141 | opp_overlap 4391897, overlap 4391896 GCCCACATAAAAAAT TTGCGC CAAA GCGCAA TCATTCACACACTTT TERM 4747 4392945 - 4392965 + G 71 -9.7 -3.13728 | ATTAGTGCGATTAGC GATACCGCT GTT AGCGGTACC TTCGATATAGCTACT Sde_3449 4392024 - 4393031 + | hypothetical protein TERM 4748 4393107 - 4393063 - T 75 -2.1 -5.25699 | AGCACACAATAAAAA GCCCTCGTGAATTACAC CTGTTTAATTT GCGGAATTACCGAGGGC TTTTTTATATATCTT Sde_3450 4393764 - 4393162 - | GTP cyclohydrolase II Sde_3451 4394447 - 4393776 - | hypothetical protein TERM 4749 4394416 - 4394431 + g 71 -3.3 -4.77157 | opp_overlap 4394416 CTTACCAATAAACAT GCAAA ATTCCA TTTGC TTTTTAGTAGCTTCA Sde_3452 4394923 - 4394444 - | phosphatidylglycerophosphatase Sde_3453 4395962 - 4394958 - | thiamine-phosphate kinase Sde_3454 4396426 - 4395974 - | NusB protein TERM 4750 4396449 - 4396467 + r 71 -3.1 -4.91977 | opp_overlap 4396449 TTAACCTTGTAATAA CGGGTAA GAACG TTAACCG TTTTATATTTTGCTA ribH 4396937 - 4396470 - | riboflavin synthase subunit beta Sde_3456 4398084 - 4396972 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II TERM 4751 4397041 - 4397057 + g 70 -5.1 -4.41494 | opp_overlap 4397040 TTTGAATTTGAAAGG TGCGCTT AGC AAACGCA TTTTACTTACGCCTA TERM 4752 4397352 - 4397364 + g 72 -9.1 -3.64703 | opp_overlap 4397337, overlap 4397337 GCGTGGGTTCGTCGG GGCGA ACC TCGCC TTTCAGTAAGGCAAA Sde_3457 4398771 - 4398109 - | riboflavin synthase subunit alpha Sde_3458 4399889 - 4398792 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 4753 4399947 - 4399907 - R 73 -10.3 -2.53822 | overlap 4399906 4399904 GGTATTTCACAATAG GGCTTAACGGTGCGCCCGC ACT GCAGGTGCACCGGCAAACA AAAAATTAGGGCTTA Sde_3459 4400430 - 4399960 - | transcriptional regulator NrdR TERM 4754 4400571 - 4400556 - H 70 -7.6 -3.65902 | opp_overlap 4400550 CTTATCTGATGTAAA TCAAGC CTCT GCTTGA TTGCCATTTCGCACC TERM 4755 4400893 - 4400877 - g 85 -6.5 -5.11112 | AAACGCCAATAAAAA CCATTGG ACC CCACTGG ATATAAACATGTCGC Sde_3460 4400656 - 4401762 + | amino acid adenylation Sde_3461 4402407 - 4401913 - | hypothetical protein TERM 4756 4402952 - 4402928 - g 70 -2.1 -5.03314 | gap 1, opp_overlap 4402928 TTGACTCGGAAAAAA TCGCACGCAT TATGAG AGGCG-GCGA TTTCCCTCTCGCCTA Sde_3462 4402525 - 4403658 + | ISGsu4, transposase Sde_3463 4404545 - 4404153 - | hypothetical protein Sde_3464 4405784 - 4404684 - | hypothetical protein TERM 4757 4406153 - 4406137 - H 70 -2.9 -5.03715 | opp_overlap 4406151 AGGATTTGCAAAAAA GCGAAGA AAA TACTCGC TAAAATTGCGTTTAG TERM 4758 4406227 - 4406215 - H 71 -4.1 -4.79667 | AAAACCGAGGAAAAA GCCAT CCC ATAGC GCATACAAATTCACA Sde_3465 4406324 - 4407301 + | hypothetical protein Sde_3466 4408100 - 4407660 - | hypothetical protein TERM 4759 4408100 - 4408136 + r 74 -9.7 -3.15999 | opp_overlap 4408100 4408104, overlap 4408104 GAGGTTTTGATACCA TGAATTTGGTGTC GTAAAATAAGG GACACCAAATTCA TTACCTATATCCGCA TERM 4760 4408136 - 4408100 - R 71 -9.7 -2.62396 | opp_overlap 4408100 4408104, overlap 4408104 GAGGTTTTGATACCA TGAATTTGGTGTC GTAAAATAAGG GACACCAAATTCA TTACCTATATCCGCA Sde_3467 4410663 - 4408444 - | regulatory protein, LuxR TERM 4761 4409639 - 4409649 + g 77 -6.8 -4.38876 | CTACGTTTTATTTCC GCAG GTA CTGC TTTATGTGTTTTTAA TERM 4762 4410285 - 4410302 + g 71 -7.7 -3.88137 | CAGGCGAAGGTTTAC TGGCCGA CACA TTGGCCA TTTCTAACACATTGT TERM 4763 4410382 - 4410408 + g 70 -2.2 -5.055 | overlap 4410385 ATCTGCCGCCCACTG GTCGTATGCC ACGTTAG GGCATACTTC TTTTTTCGCAGTTCG TERM 4764 4410385 - 4410405 + g 80 -6.9 -4.62085 | overlap 4410382 TGCCGCCCACTGGTC GTATGCC ACGTTAG GGCATAC TTCTTTTTTCGCAGT TERM 4765 4410894 - 4410912 + r 85 -2.4 -5.83211 | CTCCTCCCATTTTGC TGAAGCAG AGT CTGGTTTA TTTTTTCTTTTAGTA TERM 4766 4410960 - 4410943 - R 80 -9.1 -4.03234 | gap 1 CGTCCCCGACAGAAA CCG-GCCC ATC GGGCACGG TCAAAAACAACGACA Sde_3468 4411403 - 4411107 - | hypothetical protein Sde_3469 4411909 - 4411424 - | tRNA/rRNA methyltransferase (SpoU) family protein TERM 4767 4412103 - 4412078 - R 100 -15.5 -4.21194 | GCTGAGCATTCAAAA TGGCCACGCCA AGGA TGGCGTGACCA AGCTACACGGATGTA TERM 4768 4412265 - 4412240 - R 100 -15.5 -4.21194 | overlap 4412222 GCTGAGCATTCAAAA TGGCCACGCCA AGGA TGGCGTGACCA AGCTACACGGATGTA TERM 4769 4412427 - 4412402 - R 100 -15.5 -4.21194 | overlap 4412384 GCTGAGCATTCAAAA TGGCCACGCCA AGGA TGGCGTGACCA AGCTACACGGAAGTA TERM 4770 4412530 - 4412545 + r 77 -10.4 -3.21593 | opp_overlap 4412530, overlap 4412528 TCAAGCCCAAAAAAA CCCAGC ATAA GCTGGG TCTTGTAGGAGCGTG TERM 4771 4412545 - 4412530 - R 100 -10.4 -5.47399 | opp_overlap 4412530 4412528 TCAAGCCCAAAAAAA CCCAGC ATAA GCTGGG TCTTGTAGGAGCGTG TERM 4772 4412558 - 4412579 + r 81 -9.5 -3.86194 | gap 1 GGGTCTTGTAGGAGC GTGCGAC-CA ACT TGCGTCGCAC TTTCTACAGCAACTT Sde_3470 4421103 - 4412593 - | hypothetical protein TERM 4773 4413959 - 4413989 + g 79 -11.2 -3.35522 | overlap 4413957 TCACTACCCGTTTGA TGAGCTACTTCTAC CAT GTAGAAGCCGCTCA TGTTTGGCACCATTG Sde_3471 4422671 - 4421631 - | hypothetical protein TERM 4774 4421755 - 4421769 + g 81 -3.6 -5.42259 | overlap 4421757 CTAGGTGCCAGCTCT TGTAGA TAT TCTATA TTTTTTTGCCAATCG TERM 4775 4421839 - 4421852 + g 72 -5.2 -4.62069 | GTATCAGCCAACTCC GGGG CAGCTT CCCC TTTTTCAAATCGCAG TERM 4776 4423547 - 4423573 + G 70 -10.2 -2.5294 | overlap 4423546 4423545 ACAACCACCGCATTA TGATTCGCAACT CAA AGTTGCGAGACA ATGTTATACACAATC Sde_3472 4422865 - 4423956 + | small-conductance mechanosensitive channel-like TERM 4777 4424050 - 4424072 + T 80 -4.8 -5.20783 | opp_overlap 4424052, overlap 4424052 CAAAATCACAGTAAT TAGCAACTAG CTT CTGGTGGCTG TTTTTCTATTTAGGT Sde_3473 4424580 - 4424056 - | hypothetical protein Sde_3474 4429986 - 4424650 - | hypothetical protein TERM 4778 4426142 - 4426160 + g 70 -8.9 -3.36878 | ACCGTGCCCATCTGC TTGGCGA GGTTA TCGCCAA TTATGGGTAAATAAG TERM 4779 4426716 - 4426728 + g 76 -9.1 -3.71149 | ACACTAAGTAATCGG CTGCG CGT CGCAG TTCTATGTCTTCTGC TERM 4780 4426786 - 4426768 - G 71 -3.9 -4.74103 | gap 1, overlap 4426769 4426772 GTGGTAAGTTAAAAA CTCACGCA TTGC TGCGT-AG ACTTCATCCACTAAG TERM 4781 4427575 - 4427592 + g 70 -4.9 -4.42464 | AAAGTACGCGTTCAT TTTATCG GGCT CGGTAAA TTTATTTGCACGCTT TERM 4782 4428053 - 4428065 + g 81 -3.3 -5.43487 | TCTGATAGCAAATCT AAGCC GCT GGCTG TTTTTTCTATCGTTT TERM 4783 4429756 - 4429743 - G 70 -2.4 -4.92385 | opp_overlap 4429743 TATAGCCAAATAAAA GGTA TTTACC TACC TGTACTATGTCGCGC Sde_3475 4430358 - 4430110 - | hypothetical protein Sde_3476 4430618 - 4430382 - | hypothetical protein Sde_3477 4432651 - 4430717 - | hypothetical protein Sde_3478 4433358 - 4432678 - | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 Sde_3479 4434108 - 4433419 - | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 Sde_3480 4434755 - 4434120 - | hypothetical protein TERM 4784 4434437 - 4434427 - G 73 -4.6 -4.89966 | ACAGTTAAAAACAAA GGCA GAT CGCC GTATTCCAACATAAC Sde_3481 4435150 - 4436331 + | drug transport transmembrane protein Sde_3482 4436892 - 4436341 - | hypothetical protein TERM 4785 4437034 - 4437011 - R 73 -8.2 -3.57908 | CACCAAATACTAGAA CAGTGGCT TAATAAGC AGCCACTG GATCTATACGTACAC Sde_3483 4437641 - 4437018 - | hypothetical protein TERM 4786 4437533 - 4437518 - G 76 -4.7 -4.84017 | opp_overlap 4437518 AACGTTTTAGAAAAA GTGAC AATGCA GTCAC TTTAATGGTATCGGA Sde_3484 4438515 - 4437634 - | alpha/beta fold family hydrolase/acetyltransferase Sde_3485 4440181 - 4438508 - | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases-like TERM 4787 4439423 - 4439409 - G 77 -11.4 -3.12351 | opp_overlap 4439409 GCGCGCGATATCCAA GCTGGG GCC CCCAGC TTAAATCGCTTGCCA TERM 4788 4439409 - 4439423 + g 75 -11.4 -3.09933 | opp_overlap 4439409 GCGCGCGATATCCAA GCTGGG GCC CCCAGC TTAAATCGCTTGCCA Sde_3486 4440948 - 4440193 - | hypothetical protein Sde_3487 4442097 - 4441003 - | hypothetical protein TERM 4789 4441588 - 4441605 + g 79 -2.7 -5.40004 | opp_overlap 4441588 TACCTCTTGCGAAAA GAAGTAA GACA TTTCTTC TTTTTTACTTTCGTC Sde_3488 4443171 - 4442173 - | putative aldo/keto reductase TERM 4790 4443365 - 4443380 + r 80 -10.4 -3.53444 | opp_overlap 4443365 TTTTTGGAAAAAAAA GAGCGC TAAA GCGCTC TTTGAAAAAACATAA TERM 4791 4443380 - 4443365 - R 100 -10.4 -5.75342 | opp_overlap 4443365 TTTTTGGAAAAAAAA GAGCGC TAAA GCGCTC TTTGAAAAAACATAA Sde_3489 4444588 - 4443407 - | putative secretion protein TERM 4792 4443858 - 4443880 + g 72 -6.2 -4.31329 | GCCACATTCACACGG GCCAAGGCGG TAT CTACTTTGGC TTTTGCACTTTTTAG TERM 4793 4444417 - 4444401 - G 76 -8.1 -4.12188 | TGATCATCGGTAAAA GTAATAG TAT CTATTAC ACCGTTTACTTCAGA Sde_3490 4446185 - 4444620 - | EmrB/QacA family drug resistance transporter TERM 4794 4445228 - 4445249 + g 72 -8.7 -3.65812 | gap 1, opp_overlap 4445216, overlap 4445227 TCATTACCAACGCTC GC-GGCGCCA TGG TGGTGCCCGC TTGTGTTGGCGAAAA TERM 4795 4447439 - 4447429 - g 72 -5.4 -4.49556 | CCGGCACCAAACAAA TAGC AAC GCTA CATTCTTTTGCACAA Sde_3491 4446426 - 4447745 + | ATPase Sde_3492 4447791 - 4448054 + | GntR family transcriptional regulator Sde_3493 4448057 - 4449628 + | hypothetical protein Sde_3494 4449625 - 4450845 + | Acyl-CoA dehydrogenases-like Sde_3495 4450850 - 4451947 + | Acyl-CoA dehydrogenases-like Sde_3496 4451978 - 4452898 + | hypothetical protein Sde_3497 4453928 - 4452978 - | hypothetical protein Sde_3498 4454497 - 4453922 - | phospholipid/glycerol acyltransferase TERM 4796 4454500 - 4454530 + H 75 -10.6 -2.80583 | overlap 4454499 4454497 CTACTTGTTTCATTT TTTTCGTCCACTTG AGT TAAGTTGACGAAAA CTATATTTTTTGGTG Sde_3499 4454755 - 4455693 + | hypothetical protein Sde_3500 4456416 - 4455673 - | LuxR family transcriptional regulator TERM 4797 4456855 - 4456834 - R 72 -8.1 -3.90318 | gap 1, overlap 4456836 CTACTAGGGGATAAA TAGTGCGCTT AAC AAGCGCAC-A GAAAAACCAAAATAG TERM 4798 4456854 - 4456836 - R 100 -13.2 -3.54 | overlap 4456834 ACTAGGGGATAAATA GTGCGCTT AAC AAGCGCAC AGAAAAACCAAAATA Sde_3501 4457358 - 4456960 - | hypothetical protein TERM 4799 4457875 - 4457847 - g 73 -4 -4.81082 | gap 1, overlap 4457870 AACCAATCAAGAAAA CATCACTGC-ATT TACG AATAGCATTGATG AACTCGACGTAGTCA Sde_3502 4457641 - 4458375 + | putative oxidoreductase TERM 4800 4458467 - 4458438 - f 100 -14.3 -4.80882 | ACGCTATATCAAAAA GCATGTGCCGCAG TAAG CCTCGGCACATGC CCCACCTCTTTCGTT TERM 4801 4458649 - 4458633 - g 73 -10.9 -2.70932 | opp_overlap 4458633 4458635, overlap 4458635 CCTTTCGGTTAACCA CACCAAG CTA CTTGGTG TATTAGCTGCGTTCA TERM 4802 4458633 - 4458649 + G 75 -10.9 -3.1085 | opp_overlap 4458633 4458635, overlap 4458635 CCTTTCGGTTAACCA CACCAAG CTA CTTGGTG TATTAGCTGCGTTCA Sde_3503 4458598 - 4459521 + | hypothetical protein Sde_3504 4459855 - 4459544 - | Zn-ribbon like domain-containing protein Sde_3505 4460322 - 4459921 - | hypothetical protein Sde_3506 4460981 - 4460352 - | hypothetical protein Sde_3507 4461073 - 4461816 + | acetyltransferase Sde_3508 4462466 - 4461813 - | resolvase, RNase H-like fold Sde_3509 4464069 - 4462456 - | fibronectin, type III TERM 4803 4463297 - 4463275 - G 79 -2.6 -5.36441 | opp_overlap 4463276 4463281 4463291 TGGGTAGAGAAAAAA CCGTCGCC CTTCATC GGCAAGGG TTGCGTTTTCGAAGC Sde_3510 4465465 - 4464071 - | hypothetical protein TERM 4804 4464682 - 4464696 + g 79 -2.8 -5.27923 | opp_overlap 4464672 GCAGAGTGGCGGCAA CCAC AAGCGCC GTGG TTTTTTGTAAACTTG TERM 4805 4464939 - 4464926 - G 91 -6.7 -5.49569 | CACTAACATAAAAAA CAGGT AGGC ACCTG GGCCGAGTTTTAGCA TERM 4806 4465154 - 4465139 - G 91 -7.6 -5.10208 | CAAGGGGAATAAAAA TGTGGT GGTA ACCACA AGCCCTGCAAGCAAC TERM 4807 4465625 - 4465650 + r 100 -11.3 -4.93696 | opp_overlap 4465624 4465623 TATGGCCCTATAACT TGCTCAATTCG TCCA TGAATTGAGCA TTTTTGATCTTTCAC TERM 4808 4465769 - 4465781 + r 70 -2.7 -5.00616 | CTAGCCTGCAACAAT CGAAA CCA TTTTG TTTTTTAACCAGCCG Sde_3511 4467037 - 4465754 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Sde_3512 4468355 - 4467039 - | 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Sde_3513 4469709 - 4468390 - | aminopeptidase P TERM 4809 4468773 - 4468818 + g 82 -7.7 -4.59773 | gap 1 TTACCGATACATCGT GCGGCGCATTCCAGTGGTTA CCCGGTT TAACTTCTGCAATG-GCCGC TTTTTGAGCATCCAA TERM 4810 4469056 - 4469039 - G 76 -8.4 -4.09685 | overlap 4469040 TTGTAGGCTTGAAAA CGCGCA CCCTGT TGCGCG CAGTAATGAATAATA TERM 4811 4469598 - 4469609 + g 87 -7.2 -5.24129 | ACGAATAGTGGGTAT CGCG GCTG CGCG TTTTTTCTGCCGCGG TERM 4812 4469818 - 4469834 + r 85 -9.4 -4.17089 | opp_overlap 4469813 GATCAATGCACTAGG CCTGCG TCTCC CGCAGG TTTTGGCGCTTTGGC Sde_3514 4470398 - 4469805 - | hypothetical protein TERM 4813 4470978 - 4470963 - g 72 -6 -4.5187 | overlap 4470964 TGGAAAAAAACGAAA TCGCGC GCAA GCGCGT AGAAGCCATGATTGA TERM 4814 4470977 - 4470964 - g 71 -9.5 -3.29495 | overlap 4470963 GGAAAAAAACGAAAT CGCGC GCAA GCGCG TAGAAGCCATGATTG Sde_3515 4470815 - 4471024 + | hypothetical protein TERM 4815 4471018 - 4471008 - f 81 -4 -5.40474 | AGCGGCTTAAAAAAA TTCA TAC TGAA GCATAAGGAATAGAT Sde_3516 4471036 - 4471329 + | cell division protein ZapA Sde_3517 4471636 - 4472220 + | hypothetical protein TERM 4816 4472268 - 4472247 - T 100 -12.3 -5.26316 | opp_overlap 4472235 GTAGGCCATAAAAAA GGGCCTCTG TTGC CAGAAGCCC CGGTGATTTGCTCTC Sde_3518 4473536 - 4472967 - | multimeric flavodoxin WrbA Sde_3519 4474266 - 4473595 - | hypothetical protein TERM 4817 4474717 - 4474681 - g 74 -10.4 -3.17219 | opp_overlap 4474680 4474693, overlap 4474683 4474685 4474693 TATAACGTGGAGCAA CATATTCAAAAATGCT TGGTT AGCATTTTTGAACAAG AATTTAATGGCAGTG TERM 4818 4474715 - 4474683 - g 79 -11.6 -3.14527 | opp_overlap 4474680 4474693, overlap 4474681 4474685 4474693 TAACGTGGAGCAACA TATTCAAAAATGCT TGGTT AGCATTTTTGAACA AGAATTTAATGGCAG TERM 4819 4474713 - 4474685 - g 79 -12 -3.13073 | opp_overlap 4474680 4474693, overlap 4474683 4474681 4474693 ACGTGGAGCAACATA TTCAAAAATGCT TGGTT AGCATTTTTGAA CAAGAATTTAATGGC TERM 4820 4474705 - 4474693 - g 71 -3.4 -4.74453 | opp_overlap 4474680 4474693, overlap 4474685 4474683 4474681 CAACATATTCAAAAA TGCT TGGTT AGCA TTTTTGAACAAGAAT Sde_3520 4474633 - 4475604 + | cell wall biosynthesis glycosyltransferase-like protein Sde_3521 4475769 - 4476530 + | oxidoreductase Sde_3522 4476587 - 4477516 + | hypothetical protein TERM 4821 4477582 - 4477524 - T 95 -12.6 -3.30474 | overlap 4477520 4477517 4477532 4477533 4477548 4477555 GTCCATAACTATCAA TCGCTAAACGCTAGCCGCTAATAACTAG CAA CTAGCAACTAGCAACTAGCAACTAGCAA CTAGCAACTAGCGAT TERM 4822 4477588 - 4477532 - T 90 -11.7 -3.61764 | overlap 4477520 4477517 4477524 4477533 4477548 4477555 CTATCAATCGCTAAA CGCTAGCCGCTAATAACTAGCAACTAG CAA CTAGCAACTAGCAACTAGCAACTAGCA ACTAGCGATTAGTGA TERM 4823 4477587 - 4477533 - T 91 -13 -2.76737 | overlap 4477520 4477517 4477524 4477532 4477548 4477555 TATCAATCGCTAAAC GCTAGCCGCTAATAACTAGCAACTAG CAA CTAGCAACTAGCAACTAGCAACTAGC AACTAGCGATTAGTG Sde_3523 4478557 - 4477610 - | hypothetical protein Sde_3524 4479413 - 4478580 - | ABC transporter, ATP-binding protein Sde_3525 4479772 - 4479410 - | GntR family transcriptional regulator Sde_3526 4480619 - 4480149 - | hypothetical protein TERM 4824 4480194 - 4480182 - G 71 -3.4 -4.86001 | AGTAGGGCATAAAAA TACC TCTTC GGTA AAATCATTACTGGCA Sde_3527 4482111 - 4480780 - | MATE efflux family protein Sde_3528 4482289 - 4482921 + | glutathione S-transferase TERM 4825 4482913 - 4482903 - f 71 -3.2 -5.03314 | CGCATGTGTAAAAAA TAGC GAC GCCA GCAAATAGGAATTGC TERM 4826 4483017 - 4482991 - f 70 -8 -3.61517 | overlap 4483000 4483002 ACGCTCCGCTAATAA CGCTAAAAATCG CAC CGATTTTACGCG CCAAAAGCGGCACAA Sde_3529 4483058 - 4483798 + | hypothetical protein Sde_3530 4484541 - 4483810 - | hypothetical protein TERM 4827 4484658 - 4484637 - H 73 -2.9 -5.18297 | overlap 4484656 CAACAATAAACAAAA TGGTTGCCG ATAT CAACACCCA GCCCCATAGTGGCCA TERM 4828 4485037 - 4485054 + G 76 -8.4 -4.15044 | CGATGACCTTTTTAC TGGCCG CGCAAT CGGCCA TTTATTCCCCCGCCA TERM 4829 4488162 - 4488146 - g 73 -9.5 -3.42605 | opp_overlap 4488144, overlap 4488144 TTCAGGCAAAACAGA TTTTGGC AGC GCCAAAA AACTTGCTGCCGAAC Sde_3531 4484703 - 4488194 + | 2-acyl-glycerophospho-ethanolamine acyltransferase Sde_3532 4488197 - 4488964 + | hypothetical protein TERM 4830 4489294 - 4489307 + G 76 -4.5 -4.91977 | AGATAATATTTCACT CACCG TAGA TGGTG TTTTGTATTTTCGTG Sde_3533 4489031 - 4489981 + | SPFH domain-containing protein/band 7 family protein Sde_3534 4489985 - 4490464 + | hypothetical protein TERM 4831 4490533 - 4490504 - f 100 -12.4 -3.65581 | opp_overlap 4490502 ATCAACCTTCAATAA GCCGAATAAATA CCTACC TATTTATTCGGC GCTTACATTCAGCCT Sde_3535 4490789 - 4492105 + | hypothetical protein Sde_3536 4492189 - 4493145 + | hypothetical protein TERM 4832 4493511 - 4493529 + G 71 -10.2 -2.7438 | opp_overlap 4493502, overlap 4493510 4493508 TTAATAGCCATGCAG CATCGCGC CGA GCGCGACG GTATTATTATTGATA Sde_3537 4493145 - 4494386 + | putative acetyltransferase Sde_3538 4495266 - 4494403 - | hypothetical protein Sde_3539 4496192 - 4495305 - | hypothetical protein Sde_3540 4496730 - 4498031 + | hypothetical protein TERM 4833 4498061 - 4498082 + T 91 -8 -4.84359 | opp_overlap 4498061 AGCAACAATAAAAAA GGGGTAGT CATAAA GCTACCCC TTTTTGTGACGATCA TERM 4834 4498082 - 4498061 - T 100 -7.3 -5.66229 | opp_overlap 4498061 AGCAACAATAAAAAA GGGGTAG TCATAAAG CTACCCC TTTTTGTGACGATCA Sde_3541 4500449 - 4498131 - | general secretion pathway protein J TERM 4835 4498558 - 4498580 + g 93 -9 -4.87665 | opp_overlap 4498557 4498558, overlap 4498559 TGCGCCGTTTTAAAC TCTGGGCGCG GAT CGCGACCGGG TTTTTCTAGCTCGGC TERM 4836 4498559 - 4498579 + g 79 -10.3 -3.52117 | opp_overlap 4498557 4498558, overlap 4498558 GCGCCGTTTTAAACT CTGGGCGCG GAT CGCGACCGG GTTTTTCTAGCTCGG TERM 4837 4500198 - 4500209 + g 73 -2.2 -5.1356 | AATTTGCTGCTCTAA CTCG GGGG TGAG TTTTTCTTGCTCAGC TERM 4838 4500365 - 4500352 - G 71 -3.7 -4.90525 | opp_overlap 4500352 TAACGCGAAATAAAA GGCAC GGTA GAGCC TTCATCAAGCAGGGC Sde_3542 4500884 - 4501576 + | general secretion pathway protein I Sde_3543 4501967 - 4502428 + | general secretion pathway protein H Sde_3544 4502927 - 4502505 - | general secretion pathway protein G TERM 4839 4503222 - 4503191 - R 73 -7.2 -4.21954 | overlap 4503193 GGAAGATAGAAAGAA TAGCCTCTCTGCGA TAAA CCACAGAGAGGCGG GATGTAACGAGGAAA TERM 4840 4503220 - 4503193 - R 100 -14.2 -3.69252 | overlap 4503191 AAGATAGAAAGAATA GCCTCTCTGCGA TAAA CCACAGAGAGGC GGGATGTAACGAGGA Sde_3545 4504846 - 4503260 - | general secretion pathway protein F Sde_3546 4507342 - 4504862 - | ATPase TERM 4841 4506557 - 4506545 - G 76 -9.1 -3.74519 | opp_overlap 4506538 AATACCGTTACTAAA CGCCT CTA AGGCG GTTAGCATTTCGCCA Sde_3547 4508707 - 4507346 - | hypothetical protein TERM 4842 4509862 - 4509892 + G 79 -9.9 -3.68073 | gap 1, opp_overlap 4509864 4509875 4509876 TGGAATATTTGGGAA TACGACCGCGAAAC CGAC GTTTTGC-GTCGTA TTATTCAATCGGATA TERM 4843 4510458 - 4510420 - g 79 -12.4 -2.8937 | overlap 4510410 4510422 4510432 ATAGACGGCTATACA GACCTCACCCAAGCTGCT GGT AGCAACATGGGTGGCGTC GGCCCTGCGCAGGAA Sde_3548 4509412 - 4512354 + | type II secretion system protein C Sde_3549 4512477 - 4513256 + | hypothetical protein Sde_3550 4513268 - 4513912 + | glutamate--cysteine ligase, monofunctional Sde_3551 4513937 - 4514458 + | thiol:disulfide interchange protein DsbE, putative Sde_3552 4514480 - 4514698 + | putative lipoprotein Sde_3553 4514685 - 4515872 + | hypothetical protein TERM 4844 4516118 - 4516132 + G 74 -11.4 -2.8294 | overlap 4516115 CTTACTTTGGCCCTG GCTCCC ACT GGGAGC TGATTATCGACGATG TERM 4845 4516750 - 4516765 + G 72 -5.4 -4.4009 | gap 1, opp_overlap 4516734, overlap 4516738 4516747 CGCCCAGACTTAGCC GG-CAGC TAC GCTGGCC TTTTATACAATGGCG Sde_3554 4515955 - 4517103 + | WD-40 repeat-containing protein Sde_3555 4517100 - 4517519 + | hypothetical protein Sde_3556 4518181 - 4517531 - | hypothetical protein TERM 4846 4518170 - 4518156 - G 75 -2.8 -5.13343 | CAAGCGAAAAGAAAA CGTTTT ACG ACAACG AAGATAGTCATGAAG Sde_3557 4518882 - 4518334 - | hypothetical protein TERM 4847 4519000 - 4519015 + r 100 -10.4 -4.59773 | opp_overlap 4519000 4519011 4519012 4519013, overlap 4519011 GCAGACATAAAAAAA GCGGCT AAAA AGCCGC TTTTTGCGCATCGCA TERM 4848 4519015 - 4519000 - R 100 -10.4 -5.76633 | opp_overlap 4519000 4519011, overlap 4519011 4519012 4519013 GCAGACATAAAAAAA GCGGCT AAAA AGCCGC TTTTTGCGCATCGCA Sde_3558 4519273 - 4519064 - | cold-shock DNA-binding protein family protein Sde_3559 4520124 - 4519579 - | hypothetical protein TERM 4849 4520203 - 4520188 - R 100 -8.2 -5.73978 | opp_overlap 4520188 AGCACAAACAAAAAA GGCGCC CGAA GACGCC TTTGTAGAACCCGTT Sde_3560 4521201 - 4520224 - | hypothetical protein TERM 4850 4520982 - 4520994 + g 88 -7.7 -4.98436 | GCGGCGGAGGTGGCT CAGGA ATT TCCTG TTTTTCTAATATTAC Sde_3561 4521739 - 4521203 - | sigma-70 factor TERM 4851 4521303 - 4521313 + g 75 -3.2 -5.19212 | TCGGAGTTGGCACAG GTGG ACA TCAC TTTTTTAATCATGGT Sde_3562 4522290 - 4521739 - | hypothetical protein Sde_3563 4523044 - 4522382 - | ATPase TERM 4852 4522996 - 4522984 - G 72 -6.3 -4.31692 | AACCCACCACCAAAA CCAAT GCG ATTGG ATACATAAACTCCGC Sde_3564 4523384 - 4523085 - | cell division transporter substrate-binding protein FtsY Sde_3565 4524052 - 4523384 - | hypothetical protein Sde_3566 4526912 - 4524039 - | coenzyme A biosynthesis protein TERM 4853 4524516 - 4524539 + g 85 -3.7 -5.55769 | opp_overlap 4524516 CGCCAAATAATTAGA GCGCGCGGT TTTGCT GTCGCCCGC TTTTTTATTCTCGGC Sde_3567 4528783 - 4526909 - | hypothetical protein TERM 4854 4527075 - 4527091 + g 80 -6.5 -4.87786 | opp_overlap 4527073, overlap 4527045 TGTTTGGCAAGTAGC GCGCG ATCTATA CGCGC TTTTTCTGCGGTTAA TERM 4855 4528281 - 4528254 - G 72 -6.3 -4.27843 | gap 1, opp_overlap 4528255, overlap 4528251 4528255 TTGAAATACAAATAA GGCAGCCAGCCT TGCTT AGGCT-GCTGCT TGGCCAAGATAGATT TERM 4856 4528280 - 4528255 - G 71 -9.8 -3.15621 | gap 1, opp_overlap 4528255, overlap 4528251 4528254 TGAAATACAAATAAG GCAGCCAGCCT TGCTT AGGCT-GCTGC TTGGCCAAGATAGAT Sde_3568 4529304 - 4528771 - | helix-turn-helix, AraC type TERM 4857 4529122 - 4529104 - G 76 -4.5 -5.04597 | overlap 4529107 ATCCATAGATAAAAA CACCACC ATTTG GGTGTTG GCAGGGAACAGCAGT TERM 4858 4529394 - 4529380 - R 87 -8.6 -4.42386 | opp_overlap 4529380 4529379 TTTGGACCCACAAAA TGCCAA ATT TTGGCA GTTATTAACTCTCAA TERM 4859 4529458 - 4529447 - R 72 -7.2 -3.90843 | overlap 4529448 AAGCAAGGATAATAA CGCC AGAA GGCG GCTTACCATTCAAAC Sde_3569 4530603 - 4529593 - | membrane protein Sde_3570 4531515 - 4530745 - | hypothetical protein Sde_3571 4532023 - 4531535 - | hypothetical protein Sde_3572 4533255 - 4532020 - | chitinase II TERM 4860 4532460 - 4532450 - G 73 -2.4 -5.11836 | ATAGCCAAAACAAAA GCCG CCG CCGC TACATAGCCGGGTAC Sde_3573 4534333 - 4533269 - | general secretion pathway protein K Sde_3574 4534973 - 4534335 - | general secretion pathway protein J Sde_3575 4535340 - 4534966 - | general secretion pathway protein I Sde_3576 4535942 - 4535379 - | hypothetical protein Sde_3577 4536407 - 4535967 - | ATPase Sde_3578 4537713 - 4536478 - | TonB-dependent siderophore receptor TERM 4861 4537016 - 4536994 - G 72 -2.8 -5.05606 | gap 1, overlap 4536996 CTGAATAAAAATAAA TA-TTGCCG TCACAC CGGCAAATA AGAATATGCCGTAGT TERM 4862 4537013 - 4536996 - G 71 -7 -4.13123 | overlap 4536994 GAATAAAAATAAATA TTGCCG TCACAC CGGCAA ATAAGAATATGCCGT TERM 4863 4537284 - 4537267 - G 72 -4.7 -4.57073 | CACCGGTCCTAAAAA GCCAGAG GATT CACCGGC GCGCACCATTGCCCG TERM 4864 4537756 - 4537743 - R 72 -9.5 -3.07895 | opp_overlap 4537741 TTTACCGTTAAGATA GCGCG GTAA CGCGC AGTACTTCTTCCACA Sde_3579 4539246 - 4537735 - | glycoside hydrolase family protein TERM 4865 4538122 - 4538110 - G 85 -6.2 -5.22006 | opp_overlap 4538109 GGATGACAACAAAAA GGGC TCTAC GCCC ATATCTTGCAAACGC Sde_3580 4541252 - 4539252 - | helix-turn-helix, AraC type TERM 4866 4539737 - 4539768 + g 73 -10.3 -3.04461 | gap 1 TATTACCTTCGTTAA CGTGTGGTGTAACC GTTAG GGTTATACC-CACG TCTTCACGCTGAATA Sde_3581 4542226 - 4541255 - | general secretion pathway protein C TERM 4867 4542271 - 4542259 - H 76 -7.7 -4.20516 | overlap 4542264 TCCCCACCTAAGAAA GACCA CTA TGGTC GCAATAGGTTCGCTT Sde_3582 4542644 - 4543132 + | hypothetical protein TERM 4868 4544414 - 4544403 - g 73 -2.2 -5.26875 | TGCGCAACCAAAAAA CAGT GGTA ACCG AAGGCCGCTCTCCAA Sde_3583 4543262 - 4544854 + | glutamate-cysteine ligase TERM 4869 4544864 - 4544891 + T 78 -10.6 -3.25475 | overlap 4544862 4544865 4544867 4544880 AAATAATATTGCGGG CTAGTGGCGCAC TGCG GTGTGCCACTAC TGTTACTGTATTGCC TERM 4870 4544865 - 4544890 + T 93 -14.1 -2.54803 | overlap 4544864 4544862 4544867 4544880 AATAATATTGCGGGC TAGTGGCGCAC TGCG GTGTGCCACTA CTGTTACTGTATTGC TERM 4871 4544867 - 4544888 + T 89 -12.3 -2.80437 | overlap 4544865 4544864 4544862 4544880 TAATATTGCGGGCTA GTGGCGCAC TGCG GTGTGCCAC TACTGTTACTGTATT Sde_3584 4545399 - 4544914 - | flagellar basal body-associated protein-like TERM 4872 4545259 - 4545237 - G 70 -4.9 -4.43877 | gap 1, overlap 4545238 4545239 TAATTGGCAAATAAA TGGCCGAAGC AGGC ACTTCGG-CA CCTTCAGCCCCCTCC Sde_3585 4545585 - 4546085 + | disulfide bond formation protein B Sde_3586 4546217 - 4546681 + | anti-RNA polymerase sigma 70 factor TERM 4873 4546699 - 4546718 + F 84 -10.7 -3.65314 | opp_overlap 4546685 AGCCCTCCCCCTGCA GAGCCGC CAAACC GCGGCTC TTATATCTCTCAATT Sde_3587 4546841 - 4547827 + | hypothetical protein TERM 4874 4547877 - 4547859 - T 100 -10.3 -4.9792 | opp_overlap 4547859 TAGCGCATACAAAAA TGCCCAG ATAAA CTGGGCA TTTTTAGGCTACTCA TERM 4875 4547859 - 4547877 + T 100 -10.3 -4.63527 | opp_overlap 4547859 TAGCGCATACAAAAA TGCCCAG ATAAA CTGGGCA TTTTTAGGCTACTCA Sde_3588 4548647 - 4547916 - | peptidyl-prolyl cis-trans isomerase, FKBP-type TERM 4876 4549368 - 4549348 - g 75 -6.7 -4.47786 | opp_overlap 4549347 4549348, overlap 4549350 AAGCATTCAAACAAA CCGCTGCCG CAG CTGCAGCCG ATTTAGCCGCTGCCA TERM 4877 4549435 - 4549416 - g 80 -5.6 -5.09245 | GCAAAAGCAGAAAAA GCGAAAGC AGAC GCTCGCGC AAAACTTGTAGCCTC Sde_3589 4549071 - 4550075 + | putative CheA signal transduction histidine kinases TERM 4878 4550090 - 4550132 + T 100 -10.8 -4.24413 | gap 1, opp_overlap 4550092 4550093 4550095 4550102, overlap 4550092 4550092 4550102 AGCTCAGCGAGTAAC AAC-CACAAAAAAGCCCGG CTAAGT TCGGGCTTTTTTGTGCGTA TTATTTATTGGTCAA TERM 4879 4550092 - 4550130 + T 100 -13.4 -3.71448 | gap 1, opp_overlap 4550092 4550093 4550095 4550102, overlap 4550090 4550092 4550102 CTCAGCGAGTAACAA C-CACAAAAAAGCCCGG CTAAGT TCGGGCTTTTTTGTGCG TATTATTTATTGGTC TERM 4880 4550092 - 4550129 + T 93 -13.6 -2.81784 | opp_overlap 4550092 4550093 4550095 4550102, overlap 4550092 4550090 4550102 CTCAGCGAGTAACAA CCACAAAAAAGCCCGG CTAAGT TCGGGCTTTTTTGTGC GTATTATTTATTGGT TERM 4881 4550129 - 4550092 - T 100 -12.9 -3.73647 | opp_overlap 4550092 4550092 4550090 4550102, overlap 4550093 4550095 4550102 CTCAGCGAGTAACAA CCACAAAAAAGCCCG GCTAAGTT CGGGCTTTTTTGTGC GTATTATTTATTGGT TERM 4882 4550128 - 4550093 - T 100 -16.4 -2.83867 | opp_overlap 4550092 4550092 4550090 4550102, overlap 4550092 4550095 4550102 TCAGCGAGTAACAAC CACAAAAAAGCCCG GCTAAGTT CGGGCTTTTTTGTG CGTATTATTTATTGG TERM 4883 4550126 - 4550095 - T 95 -13.2 -2.96517 | opp_overlap 4550092 4550092 4550090 4550102, overlap 4550093 4550092 4550102 AGCGAGTAACAACCA CAAAAAAGCCCG GCTAAGTT CGGGCTTTTTTG TGCGTATTATTTATT TERM 4884 4550102 - 4550119 + T 89 -6.2 -5.30686 | opp_overlap 4550095 4550093 4550092 4550102, overlap 4550092 4550092 4550090 AACAACCACAAAAAA GCCCGG CTAAGT TCGGGC TTTTTTGTGCGTATT TERM 4885 4550119 - 4550102 - T 84 -5.5 -5.4111 | opp_overlap 4550102 4550092 4550092 4550090, overlap 4550095 4550093 4550092 AACAACCACAAAAAA GCCCG GCTAAGTT CGGGC TTTTTTGTGCGTATT TERM 4886 4550152 - 4550169 + T 75 -8.5 -3.75817 | opp_overlap 4550151 4550152, overlap 4550151 TTATTGGTCAACAAC CTAGCAA GGTA TTGCTAG TGTTTATTCTGCGAG Sde_3590 4550670 - 4550173 - | hypothetical protein TERM 4887 4550808 - 4550790 - R 100 -11.7 -5.81032 | opp_overlap 4550790 TAAGCGCAAAAAAAA GCAGCGG GCCAG CCGCTGC TTTAAGGTGTGATCA TERM 4888 4550790 - 4550808 + r 90 -11.7 -3.64599 | opp_overlap 4550790 TAAGCGCAAAAAAAA GCAGCGG GCCAG CCGCTGC TTTAAGGTGTGATCA Sde_3591 4551979 - 4550837 - | HAD family hydrolase TERM 4889 4551697 - 4551714 + g 72 -6.3 -4.26903 | opp_overlap 4551693, overlap 4551689 4551693 AGTGGTATAACGCGC TAGCGTA AGTT TGCGCTA TTTTAATGCCGTCGC TERM 4890 4552233 - 4552215 - R 100 -14.6 -5.4182 | AAGTAGAAAGAAAAA CCGCAGCT ATA AGCTGCGG CTAAAAATAATATCC Sde_3592 4552910 - 4552221 - | tRNA (guanine-N(7)-)-methyltransferase Sde_3593 4553307 - 4552936 - | hypothetical protein TERM 4891 4553392 - 4553376 - R 100 -9.4 -5.71712 | opp_overlap 4553376 TCGCATATAAAAAAA GCCGCA ATAAA TGCGGC TTTTTAGGGTAACAA TERM 4892 4553376 - 4553392 + r 100 -9.4 -4.62069 | opp_overlap 4553376 TCGCATATAAAAAAA GCCGCA ATAAA TGCGGC TTTTTAGGGTAACAA Sde_3594 4554273 - 4553419 - | RNA polymerase factor sigma-32 TERM 4893 4554105 - 4554094 - G 74 -7.2 -4.34488 | GATATGCACAACAAA GCGC AAGT GCGC CATTACCATTTTACG TERM 4894 4554435 - 4554415 - R 78 -9.7 -3.53012 | CTCGTCGGGCTTAAA GCACGCTAG AGT CTAGCACGC ACTTTACGACTTATC TERM 4895 4554451 - 4554470 + r 100 -8.6 -5.02074 | overlap 4554453 ACTTTACGACTTATC TACATGCG TACC CGCATGTG TTTTTTCAAGGCTAA TERM 4896 4554453 - 4554468 + r 83 -9 -4.13963 | overlap 4554451 TTTACGACTTATCTA CATGCG TACC CGCATG TGTTTTTTCAAGGCT Sde_3595 4555564 - 4554548 - | cell division protein FtsX TERM 4897 4555190 - 4555208 + g 74 -5.9 -4.58242 | GGTAAAGTATTCCAC CCGCGCT ACATC AGCTCGG TTTTGTAGGTTTTTT Sde_3596 4556253 - 4555561 - | cell division ATP-binding protein FtsE TERM 4898 4555827 - 4555858 + g 72 -3 -4.99645 | gap 1 TACCCACACGCTGCT GCTCACCGCCAGATA AGG TAATTGG-GTTGAGC TTTTCTTTATCGAGT TERM 4899 4556256 - 4556267 + r 70 -5.8 -4.31329 | overlap 4556254 4556265 TAAAACTGATCATTG CACG CCTG CGTG TTTTACACTTTTTAA TERM 4900 4556265 - 4556275 + r 75 -5.4 -4.78149 | overlap 4556256 TCATTGCACGCCTGC GTGT TTT ACAC TTTTTAAATTGTGGG Sde_3597 4557459 - 4556332 - | signal recognition particle-docking protein FtsY Sde_3598 4557518 - 4558126 + | methyl-accepting chemotaxis sensory transducer Sde_3599 4558259 - 4558804 + | CheW protein TERM 4901 4560018 - 4560030 + G 85 -3.3 -5.46706 | opp_overlap 4560008, overlap 4560016 4560014 ACAAACGCCTAGAGC TGGCG CGG CGCTG TTTTTATTTTAAAGT TERM 4902 4560445 - 4560435 - g 80 -6.8 -4.64144 | opp_overlap 4560438 4560438, overlap 4560438 4560439 AAGAAGCCTTAAAAA CCAC GCT GTGG ACAGCCGTTACTTTT TERM 4903 4561078 - 4561064 - g 77 -3.4 -5.252 | opp_overlap 4561064 TACGCCGATAAAAAA GCCGCA AAC CGCCGC TATATTTTTGAAATG TERM 4904 4561584 - 4561617 + G 79 -4.5 -5.22006 | opp_overlap 4561580 4561584, overlap 4561589 TTGATGTTAAAGCCA TCGCCCACCCTGTTA ACGA TAACGTGGTGTTCGA TTTTTATTGTGATGA cyaA 4559006 - 4561870 + | adenylate cyclase Sde_3601 4562779 - 4561943 - | response regulator receiver domain-containing protein Sde_3602 4562964 - 4563248 + | glutathione synthetase TERM 4905 4563308 - 4563296 - f 77 -10.5 -3.12351 | overlap 4563278 CCCGCGCACAGCCAA GGCGC ATT GCGCC AACTATCAAGTAAAT TERM 4906 4563551 - 4563535 - g 72 -5.7 -4.51174 | overlap 4563545 CTACCACAACCAAAA CGCCGAC ATA GCCTGCG ACCACTACAACCGCT TERM 4907 4564120 - 4564109 - g 76 -2.2 -5.42131 | gap 1 GAATTAGATAAAAAA GCAGC CGA GC-GC GCCCTAGAATTTTTT Sde_3603 4563392 - 4564777 + | TonB-like TERM 4908 4564803 - 4564839 + T 100 -8.8 -5.4505 | TTGCCGCCTATTTGC GTTTGCGCGAAACATG CTCGC TACATTTCGCGCAAAC TTTTTTATTAAACGG Sde_3604 4567197 - 4564876 - | hypothetical protein TERM 4909 4565634 - 4565646 + g 74 -3.3 -5.09173 | overlap 4565635 TGGCTGCAATTGCAT TGGGA ATA TCCCC TTTTTTAAGCTCTTC TERM 4910 4565937 - 4565951 + g 76 -4.2 -5.04987 | overlap 4565943 AGCGCGCTTGTACAG CTTGCT GTG GGCAGG TTTTTTCCCACTCTT TERM 4911 4567204 - 4567214 + H 71 -4.6 -4.62803 | overlap 4567200 GCTATTCATATCCAT CTCC GTT GGGG TTTATTGTTATTTGG TERM 4912 4568100 - 4568053 - g 73 -9.8 -3.36273 | gap 1, overlap 4568057 4568071 TGGCGGCAACACCAA CCAAGC-GCCCAGCGCAAATGCC AAC GGCCCCTACGCCGCGCAACTTGG CGCCGCCATAGCGTT Sde_3605 4567796 - 4570174 + | glycosyl hydrolase family chitinase TERM 4913 4570202 - 4570171 - T 77 -4.6 -5.03145 | gap 1, overlap 4570172 4570190 TAATGGCTTAAAAAA CTAACCCATAAACCC ACA AGGTTT-TAGGTTAA AAACAAAAGGCTTGG TERM 4914 4570239 - 4570206 - T 100 -16.9 -4.62069 | opp_overlap 4570211, overlap 4570211 GTTTTAGGTTAAAAA CAAAAGGCTTGGCAG CAAA CTGCCAAGCCTTTTT TATTGGGCAACGCAT TERM 4915 4570234 - 4570211 - T 100 -16.8 -5.27023 | opp_overlap 4570211, overlap 4570206 AGGTTAAAAACAAAA GGCTTGGCAG CAAA CTGCCAAGCC TTTTTTATTGGGCAA TERM 4916 4570211 - 4570234 + T 100 -16.8 -5.4505 | opp_overlap 4570211 4570206 AGGTTAAAAACAAAA GGCTTGGCAG CAAA CTGCCAAGCC TTTTTTATTGGGCAA Sde_3606 4570876 - 4570487 - | pilus retraction protein PilT TERM 4917 4570711 - 4570723 + g 74 -6.9 -4.30719 | overlap 4570713 ACTGTGTAACCATTG CCGCT GCG GGCGG TTTGTTGTCGGCGGC TERM 4918 4570838 - 4570826 - G 89 -6.2 -5.41787 | TAAAAAAGACAAAAA CGCG CCTAC CGCG ACGGCTAACCAATTT TERM 4919 4570974 - 4570964 - H 74 -6.8 -4.24963 | overlap 4570955 GAGAACCACTTAAAA GCGT CAC ACGC CGTCGCTAATATTTT TERM 4920 4571230 - 4571242 + G 70 -4.7 -4.52589 | GCTTGCCACAGTGCC CGCAG ATA CCGCG TTTTATGTAGGCGGC TERM 4921 4572589 - 4572566 - g 80 -6.7 -4.76123 | AAAGCAGCAATAAAA GGCAAACAC TTAGTG GTGTATGCC GGTGCTAAAGCTGAA Sde_3607 4571117 - 4573219 + | pilus retraction protein PilT TERM 4922 4573263 - 4573235 - T 100 -14.7 -2.82595 | opp_overlap 4573241, overlap 4573241 TTGAAGTAGTTAAAC TAAAAAGGAGCGC GCG GCGCTCCTTTTTT TATTTTATTTTATGG TERM 4923 4573241 - 4573257 + T 100 -13.7 -6.17669 | opp_overlap 4573235 4573241 TAGTTAAACTAAAAA GGAGCGC GCG GCGCTCC TTTTTTTATTTTATT TERM 4924 4573257 - 4573241 - T 100 -13.7 -5.00138 | opp_overlap 4573241, overlap 4573235 TAGTTAAACTAAAAA GGAGCGC GCG GCGCTCC TTTTTTTATTTTATT Sde_3608 4574667 - 4573414 - | hypothetical protein TERM 4925 4573523 - 4573495 - G 70 -5.2 -4.40894 | TAAAGGATAGTAAAA TGCGCGCAGCTC GGCAT GAAATGCTCGCA CCCGCTCTTCATATT Sde_3609 4576100 - 4574664 - | Delta 1-pyrroline-5-carboxylate reductase Sde_3610 4576849 - 4576100 - | ABC transporter ATP-binding protein Sde_3611 4578950 - 4576851 - | homoserine O-acetyltransferase TERM 4926 4577207 - 4577217 + g 72 -3.2 -5.01042 | overlap 4577210 CCCAGCCAACGGCAT CGGT AAA ATCG TTTTTAGTTTCGGTT TERM 4927 4577457 - 4577469 + g 83 -9.1 -4.2828 | opp_overlap 4577456 4577455 TGATTCAGATAAATT CGGCT CCA AGCCG TTTTCATCCGTAGCC TERM 4928 4579373 - 4579398 + r 91 -12.1 -3.53343 | CAGGTATAGCGCCTA TTTAGTGGTTA ATTT TAACCACTAAA TTTGAAAAACGGGTT TERM 4929 4579692 - 4579658 - R 100 -9.5 -6.13503 | opp_overlap 4579656 4579649 4579658 CAGGAATAAAAAAAA CAGGCAATAGCTA TTACTTCTT TAACTATTGCCTG TCTTGATTATTTGAT TERM 4930 4579829 - 4579810 - R 100 -11.4 -4.37886 | overlap 4579798 GTAGCTTCCATAAAA GTGGACGC AAAC GCGCCCAC AAAAAGTATTTATCT Sde_3612 4583433 - 4579873 - | methionine biosynthesis MetW Sde_3613 4585011 - 4583854 - | AraC family transcriptional regulator Sde_3614 4585435 - 4586199 + | Ham1-like protein Sde_3615 4586322 - 4586786 + | GGDEF TERM 4931 4586862 - 4586920 + T 100 -8.5 -5.29208 | gap 1, opp_overlap 4586869 4586873 4586875, overlap 4586875 GAACTCGAAATAGTA CGAATAATCAAGACAGGCACTAGTTAAA GAAA TTAAATTAGCGCCTGTTTTTATT-TTCG TTTGTTTTTTCTTTT TERM 4932 4586875 - 4586908 + T 95 -7.5 -5.56372 | opp_overlap 4586873 4586869 4586875, overlap 4586862 TACGAATAATCAAGA CAGGCACTAGTTAAA GAAA TTAAATTAGCGCCTG TTTTTATTTTCGTTT Sde_3616 4587807 - 4587433 - | GGDEF TERM 4933 4587514 - 4587524 + g 72 -5.4 -4.40804 | overlap 4587505 4587515 4587517 GAAGGCGGCTTCGGA TTGG TAG CCAA TTTTATCGGCTACTA TERM 4934 4587985 - 4587969 - R 75 -7.3 -4.25283 | ATTTTTTTACTAAAA CATAAGC CAA GCTCATG GGAATATAAAAACAG TERM 4935 4588031 - 4587998 - R 75 -3.1 -5.09762 | opp_overlap 4587998 ATGGGAATATAAAAA CAGGCAATAGTAAAA TTTC CTTAACTAAGGCCTG TCTTATTTTTTCTCC Sde_3617 4590079 - 4588082 - | hypothetical protein Sde_3618 4592647 - 4590155 - | putative oxygen-independent coproporphyrinogen III oxidase Sde_3619 4593707 - 4592829 - | histidine kinase TERM 4936 4592910 - 4592920 + g 72 -5.4 -4.40804 | overlap 4592901 4592911 4592913 GAAGGCGGCTTCGGA TTGG TAG CCAA TTTTATCGGCTACTA Sde_3620 4593855 - 4594895 + | hypothetical protein TERM 4937 4594944 - 4594975 + T 78 -5.8 -4.88217 | opp_overlap 4594943, overlap 4594945 TTGGTATGAAGGTAG GTAGCTGCTTGCCC CGCA GAGCAAACAGCTAA TTTTGATTTTTTACT TERM 4938 4594945 - 4594974 + T 76 -9.3 -3.5049 | opp_overlap 4594943, overlap 4594944 TGGTATGAAGGTAGG TAGCTGCTTGCCC CGCA GAGCAAACAGCTA ATTTTGATTTTTTAC Sde_3621 4595204 - 4594986 - | hypothetical protein Sde_3622 4596685 - 4595870 - | thioredoxin TERM 4939 4596212 - 4596226 + g 76 -2.1 -5.40072 | AATATTCAATGTTTG CTTGC CCTGT GTAAG TTTTTTTACACGCAG nudE 4597263 - 4596715 - | ADP-ribose diphosphatase NudE Sde_3624 4597477 - 4598145 + | carboxylyase-like protein TERM 4940 4598161 - 4598143 - f 70 -3.8 -4.74706 | overlap 4598146 CTTAATAGCGAAAAA TAACTCTG GCA CAGAGGCA AAGATGGATAAGGTA TERM 4941 4598158 - 4598146 - f 82 -7.7 -4.47118 | overlap 4598143 AATAGCGAAAAATAA CTCTG GCA CAGAG GCAAAGATGGATAAG TERM 4942 4598195 - 4598205 + G 83 -4.6 -5.40072 | opp_overlap 4598188, overlap 4598187 ATAGACAAGTGGCTT TGGG CCG CCCG TTTTTTTAAAACCCG Sde_3625 4598165 - 4598551 + | putative heat shock protein TERM 4943 4599078 - 4599065 - g 81 -8.1 -4.38712 | opp_overlap 4599067, overlap 4599045 4599067 TGTACCGTTAGAAAA CGGCA CCCT TGCCG AGTGCTTAAGTGATT Sde_3626 4598646 - 4599539 + | heat shock protein HSP33 Sde_3627 4600150 - 4599668 - | putative chemotaxis protein Sde_3628 4601135 - 4600194 - | chemotaxis response regulator TERM 4944 4600742 - 4600731 - G 80 -7.2 -4.57341 | opp_overlap 4600718, overlap 4600733 AACGGCTTTTAAAAA GCGG TTTA CCGC CTCCGGCCCACCTGT Sde_3629 4608157 - 4601147 - | putative CheA signal transduction histidine kinases TERM 4945 4602580 - 4602555 - G 73 -11.1 -2.58758 | opp_overlap 4602548 4602555, overlap 4602544 4602554 ACAAGGCGCGAGAAT GGCACCATGCG TGAG CGCATGAGGCC TTCTTGTAGTGTTGA TERM 4946 4602555 - 4602580 + g 77 -8.9 -3.89291 | opp_overlap 4602544 4602555 4602554, overlap 4602548 ACAAGGCGCGAGAAT GGCACCATGCG TGAG CGCATGAGGCC TTCTTGTAGTGTTGA TERM 4947 4603260 - 4603278 + g 70 -10.2 -2.56596 | TCGGATGCCACCACC TGCGCTGC ATC GCCGCGCA TAAATTGGTGCAACG TERM 4948 4607756 - 4607766 + g 72 -5.4 -4.41348 | GAATAAGTTGGTCTC GCTT AAG AAGC TTTGTTTGCGCACCG Sde_3630 4609027 - 4608179 - | protein-glutamate O-methyltransferase TERM 4949 4608961 - 4608986 + g 93 -14.9 -3.36327 | CCGCGCGCTCTTCTA GCAGTTTACTC CATT GAGTAAACTGC TTGTCGCTAAGATCC Sde_3631 4611247 - 4609052 - | putative methyl-accepting chemotaxis sensory transducer TERM 4950 4609507 - 4609521 + g 74 -7.1 -4.20516 | GGCGAGCTCCACGTA CCACC TCGGC GGTGG TTTGTTCCATCGAGA TERM 4951 4610247 - 4610257 + g 71 -6.8 -4.02021 | GTTTCCGCTGTTTCA CGCA GGT TGCG TTTAGTTGCTTGGTT Sde_3632 4611937 - 4611398 - | twitching motility protein PilI TERM 4952 4611894 - 4611870 - G 70 -9.9 -3.01791 | opp_overlap 4611862 ATTTGCTCGGGAAGA CCCTTGGCCGC GCT GCGGCTAAGGC TTGACAGGTGTACTA Sde_3633 4612350 - 4611988 - | response regulator receiver domain-containing protein Sde_3634 4612799 - 4612404 - | response regulator receiver domain-containing protein Sde_3635 4613060 - 4614013 + | glutathione synthase TERM 4953 4614076 - 4614090 + G 79 -2.8 -5.42259 | CCGCCAGCAACGACC GCCTAA GCT TTACGC TTTTTTTGGCGCTGG TERM 4954 4614380 - 4614367 - g 74 -3.8 -5.01732 | AAGCCGTGCAAAAAA GCGA GCAAAA TCGC GAGCTTATCCACACC Sde_3636 4614033 - 4614917 + | hypothetical protein Sde_3637 4615006 - 4615617 + | argininosuccinate lyase Sde_3638 4615675 - 4616103 + | exodeoxyribonuclease III xth Sde_3639 4617269 - 4616127 - | orotate phosphoribosyl transferase TERM 4955 4616686 - 4616697 + g 70 -2.2 -5.03314 | overlap 4616684 4616683 ATAACATCGGGTGCC TGCC GCAG GGTA TTTTTTAACGCTACC Sde_3640 4618338 - 4617304 - | twitching motility protein PilT TERM 4956 4617512 - 4617523 + g 85 -7.2 -5.06816 | overlap 4617511 TCGTGCGCTGCTACA CGGC CACC GCCG TTTTTCTTCAAAAGT Sde_3641 4618515 - 4619195 + | hypothetical protein TERM 4957 4619279 - 4619304 + G 93 -11.8 -3.73534 | opp_overlap 4619270 4619293, overlap 4619281 AAAAATCGCCTTTAT TGGCGCCGGC AACATG GCCGCCGCCA TTATTGCTGGGCTTG Sde_3642 4619235 - 4620092 + | pyrroline-5-carboxylate reductase Sde_3643 4620101 - 4620691 + | protein of unknown function YGGT TERM 4958 4620784 - 4620817 + G 83 -13.1 -3.20723 | overlap 4620814 GCAGCTCTTTCATTT TGATCAGCCGTTGGC ACTT GCCAACGGCCGCTCG TTAGATTCGTACGAG metX 4620725 - 4621870 + | homoserine O-acetyltransferase Sde_3645 4621872 - 4622468 + | DNA repair protein RadC Sde_3646 4622461 - 4622901 + | ribosomal protein L28 TERM 4959 4623116 - 4623131 + G 79 -9 -4.09243 | opp_overlap 4623106 4623105 TAAAGGCCCGCAACG CCTGTG CCCA CACAGG TTTTGCGGCAATCTC TERM 4960 4623291 - 4623309 + G 70 -8.8 -3.35197 | CGAAGCTGAACGCAC CGCGCGCT ACC AGTGCGTG TTGGTGTATATGCGC Sde_3647 4622947 - 4623549 + | ribosomal protein L33 TERM 4961 4623561 - 4623549 - f 71 -9.1 -3.39018 | overlap 4623547 4623527 GCAGCAGGCTAAATA GCTCG CTG CGAGC ACCCGCCAGCTCCCT TERM 4962 4623630 - 4623606 - f 71 -4.9 -4.66537 | overlap 4623619 CCCCTCAAGATAAAA CAGCCACTACA AAC TAGCGTGGCTG GCCTGCGCATACTAA Sde_3648 4623691 - 4624998 + | formamidopyrimidine-DNA glycolase TERM 4963 4625740 - 4625717 - g 76 -9 -3.67597 | opp_overlap 4625717 4625720, overlap 4625720 GCTGGTATTTAATAA TAATGAGCAT TTGG ATGCTCACTA TTGTCGTCAAAACTG TERM 4964 4625737 - 4625720 - g 74 -8.5 -3.97307 | opp_overlap 4625717 4625720, overlap 4625717 GGTATTTAATAATAA TGAGCAT TTGG ATGCTCA CTATTGTCGTCAAAA Sde_3649 4625044 - 4626414 + | GGDEF family protein Sde_3650 4627733 - 4626447 - | ribonuclease PH Sde_3651 4627935 - 4629137 + | coproporphyrinogen III oxidase, anaerobic TERM 4965 4629688 - 4629700 + G 70 -9.1 -3.38118 | opp_overlap 4629670 GCACTGCTGCTTTAT GTGCG CCT CGCAC TTGTAAGTAAATTAT TERM 4966 4631118 - 4631100 - g 75 -3 -5.10526 | overlap 4631102 4631103 AGAGCAAAAAACAAA TACGCAGG CGA CCACCGTA AGCGAAGGCCCACTG Sde_3652 4629226 - 4631523 + | Signal transduction histidine kinase-like Sde_3653 4633663 - 4631549 - | mercuric reductase, membrane-associated TERM 4967 4634030 - 4634010 - g 71 -7.5 -3.8377 | opp_overlap 4634020 AAGCGCTAGACGAAA GCCACCCCA TTT TAGAGCGGC TAAAGTTTCTGCTTA TERM 4968 4634215 - 4634201 - g 80 -7.2 -4.60924 | opp_overlap 4634214 GAAACGGTGGAAAAA CAGTAT GAA ATACTG AATAACATCTTGTTT TERM 4969 4634662 - 4634676 + G 78 -12.8 -2.54523 | overlap 4634673 TATTGCCGATTTAGC CCGCGC CCT GCGCGG TGAATTGCACTCTCG Sde_3654 4633859 - 4635967 + | polyphosphate kinase Sde_3655 4636158 - 4636484 + | thioredoxin TERM 4970 4636511 - 4636494 - f 80 -9.8 -3.58533 | CTATAAGGTTGCAAA GCGGGG GTAAAA CCCCGC TCACCTGACGCCACG TERM 4971 4636712 - 4636724 + F 73 -2.7 -5.17576 | TAGCACTAGCCTATT TGAAG CTG TTTCA TTTTTTCCGTTCATC TERM 4972 4637296 - 4637274 - g 76 -8.4 -4.10657 | opp_overlap 4637291, overlap 4637262 CCATAGCGGGGAAAA TTCGCCCCCC TAA AGAAGGCGAA CGTTATTTTGCCCTT rho 4636973 - 4638232 + | transcription termination factor Rho TERM 4973 4638258 - 4638275 + F 100 -9.8 -5.73978 | opp_overlap 4638258 AAAATGAAAGTCAAA GCCGCG CACTGT CGCGGC TTTTTTGTTTCTACT TERM 4974 4638275 - 4638258 - f 86 -9.8 -3.91846 | opp_overlap 4638258 AAAATGAAAGTCAAA GCCGCG CACTGT CGCGGC TTTTTTGTTTCTACT TERM 4975 4638804 - 4638827 + G 82 -7.5 -4.56597 | gap 1, opp_overlap 4638792 4638813, overlap 4638814 AATGTTGGCGCTTTG CGCGAAGTAG GCGAG CTACT-CGCG TTTTTGAAAGAGCCA TERM 4976 4638814 - 4638826 + G 70 -9.1 -3.33744 | opp_overlap 4638813, overlap 4638804 CTTTGCGCGAAGTAG GCGAG CTA CTCGC GTTTTTGAAAGAGCC Sde_3657 4638558 - 4640030 + | 3-octaprenyl-4hydroxybenzoate decarboxylase Sde_3658 4640058 - 4640417 + | glyoxalase/dioxygenase superfamily protein TERM 4977 4640396 - 4640429 + F 75 -8.9 -3.57418 | opp_overlap 4640393 TGGCGGTAATGAGCT TGCTGTATGGTCTGA TATA TAAGGCCACACAGCA TTCGTTTAATCACTA TERM 4978 4640555 - 4640565 + G 72 -3.2 -5.03227 | TATTCATAGCTTGCG TGGC ATT GCTA TTTTATTTGTGGTAT TERM 4979 4641060 - 4641070 + G 83 -2.4 -5.72118 | TTTCCTATTATTTCT CCGC TGC GCGC TTTTTTGTATTTTTT Sde_3659 4640526 - 4641566 + | hypothetical protein Sde_3660 4641724 - 4642605 + | GGDEF Sde_3661 4642714 - 4643154 + | putative acetyltransferase Sde_3662 4643576 - 4645105 + | guanylate kinase/L-type calcium channel region TERM 4980 4645184 - 4645137 - T 100 -15 -2.51464 | opp_overlap 4645138 4645149, overlap 4645149 CCACTAGCTATTAAG CCCAATAAAAAAGCGCACCGGC CGAC GCGGGTGCGCTTTTTTATCTTG TATTTAAATCACCAC TERM 4981 4645138 - 4645184 + T 100 -14.7 -3.40597 | gap 1, opp_overlap 4645137 4645149, overlap 4645149 CACTAGCTATTAAGC CCA-ATAAAAAAGCGCACCGGC CGAC GCGGGTGCGCTTTTTTATCTTG TATTTAAATCACCAC TERM 4982 4645149 - 4645172 + T 100 -13.8 -5.53436 | opp_overlap 4645137 4645149, overlap 4645138 AAGCCCAATAAAAAA GCGCACCGGC CGAC GCGGGTGCGC TTTTTTATCTTGTAT TERM 4983 4645172 - 4645149 - T 100 -13.8 -5.4756 | opp_overlap 4645149 4645138, overlap 4645137 AAGCCCAATAAAAAA GCGCACCGGC CGAC GCGGGTGCGC TTTTTTATCTTGTAT Sde_3663 4645750 - 4645223 - | RNA polymerase, omega subunit Sde_3664 4647062 - 4645851 - | metal dependent phosphohydrolase TERM 4984 4646789 - 4646813 + g 100 -15.7 -5.35815 | opp_overlap 4646788 4646787 CAAAATTAATTAAGC CGCGCTGAGTG TGG CGCTCGGCGCG TTTTTGTTTGCTCTC Sde_3665 4648543 - 4647059 - | YjgF-like protein Sde_3666 4649495 - 4648623 - | Na+/H+ antiporter NhaA Sde_3667 4650408 - 4649482 - | hydroxymethylbilane synthase TERM 4985 4650106 - 4650090 - G 74 -11.5 -2.88249 | opp_overlap 4650090 CATACCCCGCAGACA CCCACGC ATC GCGCGGG TCTTCGCGCTCTAAA TERM 4986 4650352 - 4650377 + g 73 -7.5 -4.11216 | overlap 4650356 TTTGGCTTTTACATC GTTGGCTTGCC ACAG GGCGAGCTCAC TTTTGCGGGTGGCGA Sde_3668 4651263 - 4650532 - | two-component response regulator AlgR Sde_3669 4652302 - 4651271 - | sensory transduction protein kinase AlgZ TERM 4987 4651799 - 4651809 + g 74 -8.2 -3.91897 | GAGATTTACCACCAT CCGC TCT GCGG TTTCTGGGTCGACGG Sde_3670 4652638 - 4654047 + | argininosuccinate lyase TERM 4988 4654160 - 4654183 + T 100 -14.6 -5.93252 | opp_overlap 4654160 ACAGAAAATGAAAAA GGCTTGGCGG TTAC CCGTCAAGCC TTTTTTGTTTTTCGA TERM 4989 4654183 - 4654160 - T 100 -12.4 -5.15526 | opp_overlap 4654160 ACAGAAAATGAAAAA GGCTTGGCGG TTAC CCGTCAAGCC TTTTTTGTTTTTCGA Sde_3671 4655024 - 4654239 - | histidine kinase TERM 4990 4655316 - 4655327 + H 89 -7.2 -5.02715 | TTTTATGCCGGAATT GCCC ATTA GGGC TTTTTCCTTTGCTGT TERM 4991 4655429 - 4655416 - H 71 -4.5 -4.62069 | overlap 4655418 GCGTGACGTTAAAAA TCGCC CAAA AGCGA GCCACCCCCAAACAC TERM 4992 4655986 - 4655975 - g 77 -7.2 -4.45068 | AGCTGGAACAAGAAA CCGG TGTA CCGG TCATAAGTATTATCA pyrE 4655455 - 4656096 + | orotate phosphoribosyltransferase TERM 4993 4656635 - 4656625 - g 72 -8.2 -3.83066 | AACCACATGAGCAAA GCCG CTG CGGC TGAACGCGCTGGCCG Sde_3673 4656187 - 4656837 + | hypothetical protein slmA 4657547 - 4656948 - | nucleoid occlusion protein Sde_3675 4658547 - 4657645 - | acetylglutamate kinase TERM 4994 4658126 - 4658136 + g 82 -2.6 -5.47821 | TCTGGGCTTTTGCGA TTAA CGG TTAA TTTTTTTGCGTGAAT Sde_3676 4661049 - 4658557 - | phosphomannomutase TERM 4995 4658742 - 4658770 + g 87 -10.3 -4.18762 | overlap 4658743 GCAGGCCATCCAATG TGGTGAGTTTGGC TTC GCCAAAGTCGCCG TTTTGAATCAGGCTT TERM 4996 4658743 - 4658769 + g 78 -11.6 -3.10775 | overlap 4658742 CAGGCCATCCAATGT GGTGAGTTTGGC TTC GCCAAAGTCGCC GTTTTGAATCAGGCT TERM 4997 4659779 - 4659803 + g 73 -9.9 -3.44443 | GTAAGCTCTGGGCTG TGGGTGCGCGC ATC GCGCGCAACAA TTAATGTTGTCTCAC TERM 4998 4660567 - 4660580 + g 72 -6.7 -4.33417 | AACTGTTTCACGCTC TTCGG CAAG CCGAA TTTGTTCTAGCTCCG TERM 4999 4660820 - 4660842 + g 71 -9.8 -3.20721 | overlap 4660821 4660833 AAGTTTTCTGCCACT ATCGCCGAGC GCT GCTCGGTGAG CTTTATTAATTGCTT TERM 5000 4660821 - 4660841 + g 80 -13.3 -2.51348 | overlap 4660820 4660833 AGTTTTCTGCCACTA TCGCCGAGC GCT GCTCGGTGA GCTTTATTAATTGCT TERM 5001 4660833 - 4660843 + g 74 -6.8 -4.37247 | overlap 4660821 4660820 CTATCGCCGAGCGCT GCTC GGT GAGC TTTATTAATTGCTTT Sde_3677 4662412 - 4661141 - | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase Sde_3678 4662609 - 4663283 + | DEAD/DEAH box helicase-like Sde_3679 4663497 - 4663733 + | 50S ribosomal protein L28P Sde_3680 4663762 - 4663917 + | 50S ribosomal protein L33P TERM 5002 4663959 - 4663943 - f 88 -9.4 -4.34402 | opp_overlap 4663943 CGCGGTACACTAAAA GCCCAG CATGT CTGGGC TTTTTTGTGCCCGTA TERM 5003 4663943 - 4663959 + F 100 -9.4 -5.252 | opp_overlap 4663943 CGCGGTACACTAAAA GCCCAG CATGT CTGGGC TTTTTTGTGCCCGTA Sde_3681 4664020 - 4664835 + | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase Sde_3682 4665247 - 4664843 - | hypothetical protein Sde_3683 4666218 - 4665499 - | RNAse PH TERM 5004 4667139 - 4667127 - g 91 -6.2 -5.45802 | opp_overlap 4667134 GCCCTAAAACAAAAA GGCC CCATC GGCC GCCGGTTAGATTTTT Sde_3684 4666419 - 4667285 + | hypothetical protein Sde_3685 4667541 - 4669337 + | hypothetical protein Sde_3686 4669346 - 4669819 + | hypothetical protein Sde_3687 4669888 - 4671072 + | hypothetical protein Sde_3688 4671074 - 4671949 + | hypothetical protein Sde_3689 4673188 - 4672502 - | endonuclease V Sde_3690 4675258 - 4673285 - | hypothetical protein TERM 5005 4675287 - 4675272 - H 71 -9 -3.29649 | opp_overlap 4675269 4675281, overlap 4675281 ATTCCATTACACTAA CTCAGC TAAG GCTGAG CCATCCGTTGATTTT TERM 5006 4675904 - 4675873 - g 79 -8.8 -4.07975 | gap 1, overlap 4675869 CAACGCAACCATAAA CGGCACCGCTTACTG TCG CAGTAA-CGATTCCG ACCCCGATGGGGATG TERM 5007 4676789 - 4676767 - g 73 -7.6 -4.14392 | opp_overlap 4676759, overlap 4676770 GTGGAACGGGCAAAA CAGCGCTTGG TAC CCAGGCGATG AATATGCCGATATTG Sde_3691 4675601 - 4677121 + | Mannan endo-1,4-beta-mannosidase TERM 5008 4677175 - 4677154 - T 85 -5.8 -5.0916 | opp_overlap 4677148, overlap 4677156 TGTGCAATATAAAAA GGGTGCCT TTTGCG AGGCACTC CAGTTTATTGATAAA TERM 5009 4677474 - 4677495 + T 100 -11.6 -5.04601 | TGTCATCACTCTGAA GGGTGCCT GTTGCG AGGCACCC TTTTTACTTTCTAAC TERM 5010 4677537 - 4677564 + T 70 -10 -2.54098 | overlap 4677536 4677533 ACCCACTGTTTTACA GGCTTTGCTT AGCTATAG AAGCAAAGCC CTATTAATTAAACGC Sde_3692 4678332 - 4677583 - | amino acid adenylation Sde_3693 4679838 - 4678408 - | response regulator receiver domain-containing protein TERM 5011 4678784 - 4678762 - G 70 -4.9 -4.37658 | gap 1, opp_overlap 4678762 AATTTTTTTAGAAAA TTGGCG-CAA CACT TCGTCGCCAA TATCGTGGCCATAGT TERM 5012 4679850 - 4679860 + r 71 -6.8 -4.13945 | CCATCCATACTTGCG CCTC TGG GAGG TTTTCCAATAAACCT TERM 5013 4679887 - 4679873 - R 79 -8.6 -4.15222 | opp_overlap 4679871 4679873 AGGTTTTCCAATAAA CCTACA CTA TGTAGG TGTTTAACATTCACA TERM 5014 4679873 - 4679887 + r 71 -8.6 -3.41222 | opp_overlap 4679873, overlap 4679871 AGGTTTTCCAATAAA CCTACA CTA TGTAGG TGTTTAACATTCACA Sde_3694 4680347 - 4679919 - | peptidyl-prolyl cis-trans isomerase FkpA, FKBP-type Sde_3695 4680471 - 4681148 + | guanylate kinase Sde_3696 4681213 - 4681485 + | DNA-directed RNA polymerase, omega subunit TERM 5015 4682961 - 4682942 - g 74 -5.6 -4.63527 | CCACTACCTCAAAAA CCAACGCC ATAT GGAGTCGG TGGAGCTGGGCAAAC TERM 5016 4683527 - 4683543 + G 77 -10.9 -3.25823 | TATTACGCTAGTCAT TGCGGTT AAT AACCGCA TTCATCTCGCCAACG Sde_3697 4681509 - 4683617 + | GTP diphosphokinase Sde_3698 4683654 - 4684037 + | peptidase S1C, Do TERM 5017 4684058 - 4684100 + T 77 -4.9 -4.93547 | overlap 4684059 4684064 4684096 TGCTGTATACCTACT ATTTACTGTGTGCCACATT GTTAG ATTACGGCACACAGTAAAA TTTTTAATTCATTAA TERM 5018 4684059 - 4684099 + T 71 -8.4 -3.55043 | overlap 4684058 4684064 4684096 GCTGTATACCTACTA TTTACTGTGTGCCACATT GTTAG ATTACGGCACACAGTAAA ATTTTTAATTCATTA Sde_3699 4685305 - 4684112 - | sodium-proton antiporter NhaA TERM 5019 4684506 - 4684496 - G 91 -8.2 -4.93968 | AGGCAGAATTAAAAA CGCC ACC GGCG CGTGTAATTCGTGCT TERM 5020 4684796 - 4684778 - G 76 -4.6 -4.99035 | CGATGTATAGAAAAA CGCAAT AATTAAA ATTGCG CCTATATCGTCGAAT TERM 5021 4685355 - 4685368 + r 76 -6.7 -4.57569 | AGGCGGCCCTAGGCA TGCAC TACA GTGCA TTTTTGCAAAAATAA Sde_3700 4686261 - 4685452 - | response regulator receiver domain-containing protein TERM 5022 4685483 - 4685493 + g 73 -2.4 -5.14563 | overlap 4685479 TATTTTTTACGGGCT GGGG CCG CCGC TTTTTTAGTGCCCGC Sde_3701 4686470 - 4687171 + | hypothetical protein Sde_3702 4687187 - 4687921 + | hypothetical protein TERM 5023 4687937 - 4687959 + F 93 -9.1 -4.44667 | opp_overlap 4687937 CGTTTAGTGCAACAA CTGCCCTGT GAATA GCGGGGCAG TTTATTATTAGCCAA TERM 5024 4688338 - 4688328 - g 85 -6.8 -5.03314 | CTTACTGCTAAAAAA TCCG AAT CGGA CCGCGTAGTAGGCTT Sde_3703 4688076 - 4688774 + | two component transcriptional regulator TERM 5025 4689931 - 4689905 - g 72 -5.3 -4.57921 | gap 2, overlap 4689908 CACAAGAAAAAAATA TATCCCTCGCGGT ATC ACCGC-AG-GATA GCCGCATAGAAGTAA Sde_3704 4688767 - 4690287 + | hypothetical protein Sde_3705 4690495 - 4691175 + | hypothetical protein TERM 5026 4691203 - 4691187 - T 100 -9.4 -5.10601 | opp_overlap 4691187 ATAAAACCACAAAAA GCCCCA TACGC TGGGGC TTTTAAAGAAAAATA TERM 5027 4691187 - 4691203 + T 85 -9.4 -4.07885 | opp_overlap 4691187 ATAAAACCACAAAAA GCCCCA TACGC TGGGGC TTTTAAAGAAAAATA Sde_3706 4691560 - 4691219 - | hypothetical protein Sde_3707 4691844 - 4692452 + | negative transcriptional regulator TERM 5028 4693160 - 4693145 - g 78 -5.4 -4.77925 | overlap 4693147 AAAAAATGCCAAAAA TATGCC CAGA GGCACA ATTAGGTATGCACTT Sde_3708 4692474 - 4693220 + | hypothetical protein TERM 5029 4693341 - 4693321 - T 100 -6.8 -5.64274 | opp_overlap 4693321, overlap 4693333 CCACTCACAAAAAAA CCGCTGAC TTAAC GCCAACGG CTTTTAAGATCGAAC Sde_3709 4695895 - 4693439 - | hypothetical protein TERM 5030 4694719 - 4694735 + g 76 -8.1 -4.19238 | TGCGAATGTGTTGAT TGCTATT GGA AATAGCA TTTTGCAATTCAGCA TERM 5031 4695674 - 4695659 - G 76 -4 -5.00884 | ATCTCCGCGAAAAAA TGCTAT TTGC ACAGCA TCCACAGTGTGTGTC TERM 5032 4696004 - 4696020 + r 71 -2.3 -5.19251 | opp_overlap 4696004, overlap 4695989 CACCGCAAAAAGCAG TGTATTT TTT AAATTCA TTTTTATTGGTGTTA Sde_3710 4697997 - 4696567 - | arabinogalactan endo-1,4-beta-galactosidase TERM 5033 4697714 - 4697724 + g 73 -2.4 -5.10767 | ATGCCCGCAGCTTTG GCGC GCT GAGC TTTTTCTATTACGTC TERM 5034 4697966 - 4697976 + g 84 -8.2 -4.57482 | GTGGACGCAGCCATA GCGC ATA GCGC TTTCTTTATAGATAA Sde_3711 4699708 - 4698398 - | putative ATP-dependent RNA helicase TERM 5035 4698474 - 4698484 + g 76 -4 -5.03747 | overlap 4698477 TTTTGGGGGTCTTTT TTAC TTG GTAA TTTTTTGCCGGGTTT TERM 5036 4698540 - 4698552 + g 79 -4.1 -5.25735 | TTTTTGGGGCCGGCG GCTTT GCC AGAGC TTTTTAGTTTTTTGG TERM 5037 4699566 - 4699548 - G 79 -4.4 -5.17353 | opp_overlap 4699536 4699549, overlap 4699536 ATAGGCAGCAAAAAA GCGGCCGT TTT ACCGCTGC CGGTTTTGGCCGACA Sde_3712 4700184 - 4699708 - | hypothetical protein Sde_3713 4700384 - 4701028 + | putative lipoprotein TERM 5038 4701432 - 4701418 - g 71 -3.6 -4.77775 | AGCCCAGAAAACAAA GTAAAT AAA ATCTAC GAAGTGGAATTAGAA Sde_3714 4701025 - 4701774 + | pseudouridine synthase, Rsu Sde_3715 4701796 - 4702503 + | hypothetical protein Sde_3716 4703308 - 4702607 - | hypothetical protein Sde_3717 4705539 - 4703452 - | ATP-dependent DNA helicase RecG Sde_3718 4706472 - 4705546 - | LysR family transcriptional regulator TERM 5039 4707105 - 4707124 + G 86 -11.4 -3.73775 | ATTCACGCGGACGAC TGCGCCGG TGTA CTGGCGCA TTTAATCCAACTGCA Sde_3719 4706520 - 4707410 + | phosphate ABC transporter permease Sde_3720 4707664 - 4709058 + | putative signal transduction protein TERM 5040 4709118 - 4709146 + T 100 -6.8 -6.06723 | gap 1, opp_overlap 4709113 4709118 AGAAAAGAATTAAAA CCGCTC-AAGTAG CTTA TTGCTTAGAGCGG TTTTTTTTTGGGGGG Sde_3721 4710015 - 4709191 - | phosphate ABC transporter permease Sde_3722 4710813 - 4710244 - | TetR family transcriptional regulator Sde_3723 4710996 - 4711886 + | hypothetical protein TERM 5041 4711904 - 4711950 + F 100 -10.4 -4.43877 | opp_overlap 4711908 4711918, overlap 4711907 4711908 4711918 TTCTAAGCTATCGCA TACATCAATAAAAAGGGATGTT AAG AGCATCCCTTTTTATTGCACTA TTTATTTCACCATTC TERM 5042 4711907 - 4711948 + F 86 -10.5 -3.81958 | gap 1, opp_overlap 4711908 4711918, overlap 4711904 4711908 4711918 TAAGCTATCGCATAC AT-CAATAAAAAGGGATGTT AAG AGCATCCCTTTTTATTGCAC TATTTATTTCACCAT TERM 5043 4711908 - 4711947 + F 95 -14 -2.88452 | gap 1, opp_overlap 4711908 4711918, overlap 4711907 4711904 4711918 AAGCTATCGCATACA T-CAATAAAAAGGGATGTT AAG AGCATCCCTTTTTATTGCA CTATTTATTTCACCA TERM 5044 4711946 - 4711908 - f 93 -13.4 -2.9006 | opp_overlap 4711908 4711907 4711904 4711918, overlap 4711918 AAGCTATCGCATACA TCAATAAAAAGGGATGTT AAG AGCATCCCTTTTTATTGC ACTATTTATTTCACC TERM 5045 4711918 - 4711936 + F 100 -9.6 -5.09204 | opp_overlap 4711908 4711918, overlap 4711908 4711907 4711904 ATACATCAATAAAAA GGGATGTT AAG AGCATCCC TTTTTATTGCACTAT TERM 5046 4711936 - 4711918 - f 90 -7.4 -5.17744 | opp_overlap 4711918 4711908 4711907 4711904, overlap 4711908 ATACATCAATAAAAA GGGATGTT AAG AGCATCCC TTTTTATTGCACTAT TERM 5047 4712762 - 4712779 + G 80 -6.9 -4.62069 | CTATGATGGGTGGTG CCTCTGC GGTA GCAGTGG TTTTTGCAATAGCAG Sde_3724 4712431 - 4713369 + | TRAP dicarboxylate transporter, DctM subunit TERM 5048 4714423 - 4714403 - g 73 -10.5 -3.10612 | opp_overlap 4714408, overlap 4714405 4714408 GTGAATTGCAATATA TAGAAGCGC ACG GCACTTCTA CCCCAGTGGGCGACC TERM 5049 4716128 - 4716109 - g 74 -3.6 -5.0133 | gap 1, overlap 4716112 TACCCCTGGAAAAAA GACCGCTAC TGG GTAG-AGTC AAAATCGGTAGCGCA TERM 5050 4717430 - 4717420 - g 79 -8.2 -4.2717 | opp_overlap 4717420 4717427 ATTACCCTAGCAAAA GCGC TTG GCGC TATTAAAAATAATGC TERM 5051 4719130 - 4719120 - g 76 -2.4 -5.40072 | CTTCGCGCAAAAAAA TGGC CAA GCCC TGCAGTTTATTTCAC TERM 5052 4720721 - 4720709 - g 70 -4.7 -4.38092 | CAATAACCAAAACAA GCCGC TTA GCCGC AGCAAGCCATGATGA TERM 5053 4721154 - 4721138 - g 72 -5.7 -4.3767 | overlap 4721139 GGACAGTAGAAGAAA TGCGCAG ACT CCGCGCC CTGTGCCAAACAGAA TERM 5054 4721957 - 4721977 + G 87 -10.5 -4.07877 | TCGAAGTGGGTGACA GCTCGGTAA AAC TTATCGAGC TTATTTATCACCTAC Sde_3725 4713460 - 4722795 + | polyketide synthase modules and related proteins-like TERM 5055 4722861 - 4722814 - f 78 -9.1 -3.76781 | gap 1, opp_overlap 4722821, overlap 4722826 AAACACTTCATCAAA TTCATCACC-TAAGGCTGCCGC GCAAA GCGGCAGCCCCACGGTGTTGGC AAAAGGTATTCACGC TERM 5056 4722848 - 4722826 - f 100 -16.3 -3.10908 | opp_overlap 4722821, overlap 4722814 AAATTCATCACCTAA GGCTGCCGC GCAAA GCGGCAGCC CCACGGTGTTGGCAA TERM 5057 4723398 - 4723388 - g 83 -4 -5.28826 | AAAGCTTATAAAAAA CTTT TGT AAAG GCTTGCGGCAGTTTA Sde_3726 4722996 - 4724756 + | phytoene dehydrogenase and related proteins-like TERM 5058 4724775 - 4724793 + F 76 -11 -2.57983 | overlap 4724774 4724773 AAATTGCTATTCACA TGGCCACT GTA GGTGGCCA CTATATTTCGCTTAT TERM 5059 4725029 - 4725039 + G 70 -2.4 -5.00616 | opp_overlap 4725017, overlap 4725019 TAACCGCACTGTATT CGGC AGC GCAG TTTTTTGCCGCACCA TERM 5060 4725694 - 4725712 + G 70 -8.8 -3.4691 | opp_overlap 4725694 4725693, overlap 4725693 4725706 CCGCCACTTATTAAG CGCTTTGG CCA CCAACGCG TTGCTGTTGTTAGCT Sde_3727 4724878 - 4726119 + | cold shock protein Sde_3728 4726893 - 4726132 - | oleoyl-(acyl-carrier protein) hydrolase TERM 5061 4726444 - 4726461 + g 72 -8.4 -3.79419 | overlap 4726442 TAACACCGCTTGCGG GCTGCC ATTAAG GGCAGC TATTTTATCCAAAAA Sde_3729 4729405 - 4727069 - | TonB-dependent receptor, putative TERM 5062 4728339 - 4728358 + g 72 -2.8 -5.03945 | AATTCCCAACGTTCT GTTTGCAT GGCA ATGCGCAC TTTTTCTACTTCTTC TERM 5063 4728832 - 4728863 + g 72 -5.8 -4.45577 | gap 1, overlap 4728862 TGTTTAAATCGTTTA CGCTGTTGTAGCGTG CCT CAAGC-GCGACGGCG TTTTCTAGCGTTTGT TERM 5064 4729171 - 4729157 - G 75 -11.4 -3.05596 | opp_overlap 4729156 4729146 TAGCGTTTCACCTAA GCTGCC ACT GGCAGC ATTGCGTAAGGCTTC Sde_3730 4729919 - 4729518 - | hypothetical protein Sde_3731 4731471 - 4730041 - | protease DO TERM 5065 4732271 - 4732285 + G 75 -2.8 -5.20633 | overlap 4732273 GCGCACATTTATCGG TAGTTG GAG CAACCA TTTTTATATGTTTTT TERM 5066 4732324 - 4732345 + G 75 -10.1 -3.53012 | CGGCACTGTATTGCG CCGTTGCAG CAGA CCGCAACGG TTTAACCAACCAACC Sde_3732 4731879 - 4734059 + | putative regulator of cell autolysis-like TERM 5067 4734199 - 4734188 - g 73 -4.4 -4.80736 | opp_overlap 4734191 GAGCAAATAAATAAA TTGC GCCC GCAA CTGGTGTTTATGGAT Sde_3733 4734056 - 4734805 + | response regulator receiver domain-containing protein Sde_3734 4735060 - 4734872 - | hypothetical protein TERM 5068 4734993 - 4734969 - G 77 -11.5 -3.12668 | TATTTCCACATGGAA TCACTACCCAT ACC AAGGGTAGTGA ACAACACAATACTAA TERM 5069 4735103 - 4735119 + r 71 -9.5 -3.00525 | ATGTTGCATAGCTAT TTACTGC TAA GCAGTAA TCTAATTTGAAAACA Sde_3735 4736299 - 4735121 - | heavy metal efflux pump CzcA TERM 5070 4735658 - 4735668 + g 85 -5.4 -5.43329 | CGGGCTTATAAGCAG CGTT TCT AACG TTTTATTTTCTTTTT Sde_3736 4737071 - 4736322 - | Na+ extrusion transport system ATP-binding protein TERM 5071 4737011 - 4737021 + g 72 -5.4 -4.45696 | TATGTTTGGCGTGCT GCAA TTT TTGC TCTTTTTTATTTAAC Sde_3737 4737245 - 4737910 + | NADH dehydrogenase Sde_3738 4738041 - 4739579 + | hypothetical protein TERM 5072 4739845 - 4739829 - g 74 -3.5 -5.03145 | overlap 4739830 TAATGGGGCAAAAAA TGCTCGC CCT GCGCGCT CTAGATTACGAATAC TERM 5073 4739878 - 4739889 + G 90 -7.2 -5.40072 | opp_overlap 4739874 4739877 4739878 ACTAAACGAAGCAAT GCGC ATTG GCGC TTTTTTTGGCGCAGC Sde_3739 4739573 - 4740124 + | hypothetical protein Sde_3740 4741188 - 4740139 - | lipopolysaccharide core biosynthesis mannosyltransferase TERM 5074 4740197 - 4740226 + g 74 -7.1 -4.23104 | GCTTCAGTTTGCACT TGGTAGTGCGC TTCAATGC GCGCCCTGCCA TTTATTCCCATTTCA TERM 5075 4740485 - 4740463 - G 72 -6.2 -4.21462 | opp_overlap 4740462 4740465, overlap 4740453 4740466 ATCCATCACCGAAAA CAGTTCCGGC AAA GCCGCAAATG GTTGCTCGCCTAAAA Sde_3741 4742050 - 4741223 - | putative glycosyltransferase Sde_3742 4742894 - 4742055 - | hypothetical protein TERM 5076 4742153 - 4742163 + g 85 -6.8 -5.03314 | overlap 4742152 CATTACCGTCTTCGC GCAC GTT GTGC TTTTTTAACGATACG Sde_3743 4743894 - 4743025 - | pirin TERM 5077 4743497 - 4743509 + g 86 -9.1 -4.37711 | opp_overlap 4743491 GCAATATCATCGTAA TGGGC TGG GCCCA TTTTGGCTTTGCTGG Sde_3744 4744520 - 4743891 - | (Acyl-carrier protein) phosphodiesterase TERM 5078 4744709 - 4744691 - g 76 -11.8 -2.57468 | overlap 4744690 CCGTAGTAGACGAAG GCAGCTTT GCC AAAGCTGC AGAGGCGCTTAACAA TERM 5079 4745444 - 4745423 - g 74 -3.7 -5.00616 | opp_overlap 4745423 4745425, overlap 4745425 CGCTTGCCGAAAAAA TGGAGCGAT TTAT ATCACTCTA TTTAATCAAGACAGA Sde_3745 4744633 - 4745547 + | putative transcriptional regulator Sde_3746 4746521 - 4745544 - | peptidase-like TERM 5080 4746525 - 4746538 + r 87 -4.5 -5.44638 | opp_overlap 4746525 CGTGTTTAACATAAG CCTGC CCCT GTAGG TTTTATTTTTCTTGT Sde_3747 4747023 - 4746541 - | low molecular weight phosphotyrosine protein phosphatase Sde_3748 4747108 - 4748379 + | regulatory protein, ArsR TERM 5081 4748393 - 4748420 + T 74 -9.8 -3.19789 | opp_overlap 4748395 4748396, overlap 4748395 4748417 4748417 AGGTTATTACTTGAT AATCCCCTAGGC GCCC GCCTAGGGGCTG TTAGCTGTTAGCTGT TERM 5082 4748418 - 4748395 - T 95 -12.4 -3.34043 | opp_overlap 4748393 4748395 4748417 4748417, overlap 4748396 GTTATTACTTGATAA TCCCCTAGGC GCCC GCCTAGGGGC TGTTAGCTGTTAGCT TERM 5083 4748395 - 4748418 + T 93 -12.4 -3.1577 | opp_overlap 4748395 4748396, overlap 4748393 4748417 4748417 GTTATTACTTGATAA TCCCCTAGGC GCCC GCCTAGGGGC TGTTAGCTGTTAGCT TERM 5084 4748417 - 4748396 - T 100 -15.9 -2.60212 | opp_overlap 4748395 4748393, overlap 4748395 TTATTACTTGATAAT CCCCTAGGC GCCC GCCTAGGGG CTGTTAGCTGTTAGC Sde_3749 4748726 - 4748463 - | hypothetical protein TERM 5085 4748908 - 4748877 - R 100 -12.4 -3.5032 | opp_overlap 4748884, overlap 4748884 CTTTGAGAGCAAACA CAAAAAAGGCCGCC CGTA GGCAGCCTTCTTTA AATAACGCTTGTTAG TERM 5086 4748884 - 4748901 + r 77 -8.3 -3.96216 | opp_overlap 4748877 4748884 AGCAAACACAAAAAA GGCCGCC CGTA GGCAGCC TTCTTTAAATAACGC TERM 5087 4748901 - 4748884 - R 100 -10.5 -5.5762 | opp_overlap 4748884, overlap 4748877 AGCAAACACAAAAAA GGCCGCC CGTA GGCAGCC TTCTTTAAATAACGC Sde_3750 4749839 - 4748931 - | outer membrane protein (porin) Sde_3751 4751030 - 4750311 - | phosphate uptake regulator, PhoU Sde_3752 4751941 - 4751060 - | putative phosphate ABC transporter, ATP-binding protein (PstB) TERM 5088 4751491 - 4751507 + g 76 -7.9 -4.2828 | CAAGGCCGTGAATCT TGGGGCC GTA GGCCACA TTTTCGTAAATAGAC TERM 5089 4751818 - 4751838 + g 75 -6.7 -4.46432 | CAAATTTGGCGTTTT CCGTAAGGG GCA CCCCCACGG TTTTGGTAATTTTTT Sde_3753 4753250 - 4751958 - | phosphate ABC transporter, permease protein TERM 5090 4753171 - 4753187 + g 83 -4.3 -5.44119 | opp_overlap 4753168 AACGCTTTAAAACGG CGCTCTG CCG CGTAGCG TTTTTTTAGGCTGCG Sde_3754 4754647 - 4753250 - | phosphate ABC transporter, permease protein TERM 5091 4753862 - 4753844 - G 78 -6.6 -4.57073 | opp_overlap 4753827, overlap 4753845 CAGTGGCTTTAAAAA GCCGCGCA ATT TACGCGGT GCATATTCTGCCAAA TERM 5092 4753861 - 4753845 - G 73 -10.1 -3.33922 | opp_overlap 4753827, overlap 4753844 AGTGGCTTTAAAAAG CCGCGCA ATT TACGCGG TGCATATTCTGCCAA TERM 5093 4754369 - 4754353 - G 72 -6.6 -4.21974 | overlap 4754349 CCACTACCGAATAAA CTTGGT TTAGC ACCAAG CCTCGCTCAGCTTCA TERM 5094 4754707 - 4754678 - R 88 -10.1 -4.08939 | gap 1, opp_overlap 4754681 4754683, overlap 4754683 TAATACCTAGATAAA GAAAACCCAGCTAC AGT GT-GCTGGGTATTC TATGCAGTTTTAAGA TERM 5095 4754702 - 4754683 - R 100 -8.6 -5.05113 | gap 1, opp_overlap 4754683 4754681, overlap 4754678 CCTAGATAAAGAAAA CCCAGCTAC AGT GT-GCTGGG TATTCTATGCAGTTT Sde_3755 4755826 - 4754783 - | phosphate binding protein, putative TERM 5096 4755865 - 4755893 + H 72 -9.6 -3.18582 | gap 1, overlap 4755888 GAATACTTGCCTAAG CTGGCGGCGCACA AATT TGTGGG-CGCCAG TTGATAGCTGGCATA TERM 5097 4755967 - 4755957 - H 71 -4.6 -4.60808 | TTATAAAAATATAAA CCGC TGC GCGA CAATGCCAAATTACA Sde_3756 4756252 - 4756833 + | permease protein TERM 5098 4757753 - 4757764 + G 74 -3.6 -4.98352 | GGTATTCGCCATTTT GCTG GGCT CGGC TTTATTTTCTTTAGT Sde_3757 4756827 - 4758191 + | C4 dicarboxylate ABC transporter permease TERM 5099 4758250 - 4758209 - f 78 -9 -3.85389 | gap 2 GGTTAACAATTTAAA TTAGCTTGCCG-AA-AACGA ATAA TCGTCACTACGGCAAGCTAA AGGGGAAAGATATGT TERM 5100 4758452 - 4758462 + G 80 -6.8 -4.57073 | CCACTGTCGCCGTAG GTGC CAT GCAC TTTTTGCGCCCCGTA TERM 5101 4758606 - 4758592 - g 79 -4.2 -5.19251 | opp_overlap 4758592 4758593, overlap 4758593 GAAGAGCAACAAAAA GTCACC GAC GGTGAG TTTGTTTATGTGTCT Sde_3758 4758262 - 4758666 + | putative acyl-CoA thioester hydrolase TERM 5102 4758693 - 4758707 + F 82 -7.8 -4.47183 | CAGATTACAGGCTAT GCGAGC TTA GTTCGC TTTGTTTGCATAGTG Sde_3759 4758910 - 4759140 + | hypothetical protein TERM 5103 4759175 - 4759197 + T 100 -9.1 -5.00616 | opp_overlap 4759175 TTAAACATAAAAAAA GGGCAACCC CATAA GGCTTGCCC TTTTTTAAAAGCGAG TERM 5104 4759197 - 4759175 - T 100 -9.8 -5.88197 | opp_overlap 4759175 TTAAACATAAAAAAA GGGCAACCCC ATA AGGCTTGCCC TTTTTTAAAAGCGAG Sde_3760 4759430 - 4759221 - | cold-shock DNA-binding protein family protein Sde_3761 4760111 - 4759674 - | hypothetical protein TERM 5105 4760192 - 4760165 - R 100 -8.5 -5.4505 | gap 2, opp_overlap 4760172 CTTCTGAATAAAAAA GCCCGAT--GGCG GCTT CGCCTTATCGGGC CTACAATTTAATACC TERM 5106 4760246 - 4760256 + r 75 -3.2 -5.1287 | TTTTTTACCGTCTAT TGCG TCC TGCA TTTTTTGGCTGTAAC Sde_3762 4761880 - 4760222 - | hypothetical protein Sde_3763 4763075 - 4761939 - | hypothetical protein TERM 5107 4762491 - 4762519 + g 80 -6.9 -4.67607 | opp_overlap 4762495, overlap 4762495 AGGGATGCGCATTTT TAAACCCTGTAAA TCG TTTATAGAGTTTA TTTCTTTATTAAACC TERM 5108 4762495 - 4762515 + g 71 -3.3 -4.86861 | opp_overlap 4762495, overlap 4762491 ATGCGCATTTTTAAA CCCTGTAAA TCG TTTATAGAG TTTATTTCTTTATTA uvrD 4765308 - 4763134 - | DNA-dependent helicase II TERM 5109 4765727 - 4765707 - g 76 -8.9 -3.71917 | opp_overlap 4765707 ACCGTAAACCTTAAA GGCGCCAGC CAA GCTAGCGAC TCTGGTACATCGGAC Sde_3765 4765554 - 4765907 + | glycosyl transferase WecB/TagA/CpsF TERM 5110 4766139 - 4766113 - g 82 -2.8 -5.48063 | opp_overlap 4766127 4766129, overlap 4766126 4766127 AGGCAATAGAAAAAA CGCTTAGCCACA ACC CGCAGCTGCGCG GCTTTGAATTTAAAC TERM 5111 4766254 - 4766221 - g 70 -10.3 -2.57132 | overlap 4766220 4766228 4766249 CTTTGGCGCTAGAAG CCGAGAATTTTGCCG GCAG CGGCGAAATTGCCGG TACGGATTCGGCAGA TERM 5112 4766987 - 4766976 - g 80 -5.8 -4.93316 | CAACAACATCAAAAA CTGC AACT GCAG GAAGTGTTATTTAAA Sde_3766 4766007 - 4767254 + | cation efflux system protein Sde_3767 4767275 - 4768381 + | Fis family transcriptional regulator TERM 5113 4768455 - 4768465 + G 76 -4 -4.9645 | ATAGAGCGGCGAGTG CTTA TAT TAAG TTTTATTATTGTAAT TERM 5114 4770389 - 4770373 - g 70 -9.5 -3.01428 | overlap 4770372 4770384 CCGAAATAGAACAAG CGGTAAA AAC TTTACCG GGTAACAATTATGAG Sde_3768 4768413 - 4771529 + | Co/Zn/Cd efflux system membrane component TERM 5115 4771562 - 4771592 + T 77 -6.1 -4.70739 | CCGCTATTTTTGAGT GCCCACGGGGAGT GTCAA AATCTTTGTGGGC TTTTGCTTATTTTTC TERM 5116 4771612 - 4771644 + T 71 -8.7 -3.36671 | opp_overlap 4771612 GCTTATTTTTCAGAA TGGACTTAAAAGT ATTCATA ATTTTTAAGTCCA TTCTGAAATTAGACT Sde_3769 4772661 - 4772137 - | hypothetical protein TERM 5117 4772710 - 4772720 + r 100 -4 -5.95539 | ATTATCTTTTAGCTT TTGA AGA TCAA TTTTTTTCTTTCGAA Sde_3770 4773143 - 4772703 - | histidine kinase TERM 5118 4773129 - 4773155 + g 85 -3.6 -5.47159 | opp_overlap 4773134 GGCTTTTTCAGTGTC GACAACGACCAT CAT ATAGTCGGCGTC TTTTTTATGTTGCCC Sde_3771 4773396 - 4773160 - | hypothetical protein Sde_3772 4774101 - 4773571 - | response regulator receiver domain-containing protein TERM 5119 4773962 - 4773939 - G 82 -7.6 -4.64844 | CTGAGACATATAAAA TAGACAACAA ACCA TTATTGTCTA TAAAAATTATCCTAT Sde_3773 4774585 - 4774106 - | hypothetical protein TERM 5120 4774536 - 4774558 + g 72 -3.2 -5.03994 | GTTGCAGATACGCTT GCTACGCCGG TAA TCGGGGCGGC TTTTTCTGTGTCGAC Sde_3774 4775703 - 4775179 - | hypothetical protein Sde_3775 4777329 - 4775707 - | helix-turn-helix, AraC type TERM 5121 4776470 - 4776480 + g 86 -3.2 -5.67711 | GCGTCGGAGTATTTG GGTT GAT AGCC TTTTTCTTTTATTTC TERM 5122 4777810 - 4777795 - g 73 -4.6 -4.87389 | overlap 4777796 TACGCCAAAAATAAA GGTGGC ACCG GCCACG GCTTAGCCGCACAAG TERM 5123 4777952 - 4777975 + G 77 -6.8 -4.40561 | gap 1, overlap 4777958 AATTAGAAGAATATT TATTACCCGCG CTG CGCGG-TGATA TTATTTTTAGCCACG TERM 5124 4777958 - 4777970 + G 73 -10.5 -2.97636 | overlap 4777952 AAGAATATTTATTAC CCGCG CTG CGCGG TGATATTATTTTTAG TERM 5125 4778156 - 4778168 + G 77 -3.5 -5.14563 | GCCACAAACCACCCT TTAAT AAA ATTAA TTTTTTAATACCCGC Sde_3776 4777606 - 4778790 + | histidine kinase Sde_3777 4778801 - 4779508 + | response regulator receiver, CheY-like Sde_3778 4780216 - 4779512 - | arsenical resistance protein ArsH, putative Sde_3779 4781259 - 4780243 - | arsenical pump membrane protein, putative TERM 5126 4780783 - 4780768 - G 72 -3.2 -5.07486 | gap 1, overlap 4780769 TACGCCTAATAAAAA CGCGGCC AAA GGC-GCA AAGGCAAAAATCATA Sde_3780 4781762 - 4781259 - | protein tyrosine phosphatase Sde_3781 4782115 - 4781783 - | ArsR family transcriptional regulator TERM 5127 4782731 - 4782712 - g 77 -7.1 -4.37886 | CCACTGGGCAGAAAA CACCGGC GCGGAA GCCAGTG TAGTAATAGGTACCT Sde_3782 4782362 - 4782790 + | hypothetical protein Sde_3783 4783364 - 4782804 - | hypothetical protein TERM 5128 4782831 - 4782849 + g 73 -4.5 -4.82901 | CCCCGCTTTTTGCTT CCACTCT TCTAT AGAGGGG TTTTTGTAGCCAGGC Sde_3784 4783904 - 4783374 - | XRE family transcriptional regulator TERM 5129 4783769 - 4783787 + g 72 -8.8 -3.6215 | overlap 4783777 TAACATCTGCAATGC TGGCTGGG CGA CCAAGCCA TTTGGCGTAGGTTAA Sde_3785 4784219 - 4784512 + | hypothetical protein Sde_3786 4784663 - 4785628 + | hypothetical protein TERM 5130 4785825 - 4785835 + G 71 -6.8 -4.06419 | opp_overlap 4785825 TTTATCGGATGAAAA TGCG CTG CGCA TTATTTCTGGCCGCC TERM 5131 4785835 - 4785825 - g 74 -6.8 -4.26903 | opp_overlap 4785825 TTTATCGGATGAAAA TGCG CTG CGCA TTATTTCTGGCCGCC Sde_3787 4785628 - 4785951 + | two component LuxR family transcriptional regulator Sde_3788 4785941 - 4786297 + | hypothetical protein Sde_3789 4786297 - 4787034 + | hypothetical protein TERM 5132 4787123 - 4787098 - f 100 -14.1 -3.5774 | gap 1, opp_overlap 4787098, overlap 4787106 ATTCAATTCGTCAAA GCCCGAAACGCG CTA CGC-TTTCGGGC TTTTTTGTGTTTCCA TERM 5133 4787098 - 4787123 + F 100 -14.1 -5.56264 | gap 1, opp_overlap 4787098 4787106 ATTCAATTCGTCAAA GCCCGAAACGCG CTA CGC-TTTCGGGC TTTTTTGTGTTTCCA TERM 5134 4787194 - 4787176 - f 70 -7.6 -3.62572 | TAGGAGTAGCCGAAA TAAAATCA CTC TGATTTTA AATATATAAGAAATA TERM 5135 4787909 - 4787897 - g 72 -5.5 -4.3898 | opp_overlap 4787897 ACGACCCCGATAAAA TCGCC ACA GACGA TTTGCAAACTGTGTT TERM 5136 4788898 - 4788888 - g 73 -4 -4.88163 | CCAATACAAAATAAA CAAT ATT ATTG AATTTGTAAGCCAAG Sde_3790 4787218 - 4789368 + | Outer membrane receptor for ferrienterochelin and colicins-like Sde_3791 4790407 - 4789454 - | cell wall biosynthesis glycosyltransferase-like protein Sde_3792 4791488 - 4790409 - | response regulator receiver domain-containing protein Sde_3793 4792709 - 4791501 - | hypothetical protein TERM 5137 4791991 - 4792014 + g 75 -3.1 -5.15969 | gap 1, opp_overlap 4791990 ACCGGTAAAACAACC CCCATTG-CC ACCCA GGACAACGGG TTTTTTAAATTACCC TERM 5138 4792663 - 4792653 - G 73 -4 -4.73388 | AACCTTGAGCAAAAA TACT GCC AGTA CAAGCCAACCAATTA Sde_3794 4794142 - 4792745 - | hypothetical protein TERM 5139 4793457 - 4793472 + g 80 -6.2 -4.84311 | GTTTTGCGCAATTCC GAATGA CTAG TCATTC TTTTATTCTGTAAAG TERM 5140 4793816 - 4793835 + g 93 -9.2 -4.7339 | overlap 4793811 4793813 TAACTTTTCGGCTGC GCCGCGCA TTAC TTCGCGGC TTTTTAGAATTTCTT Sde_3795 4795461 - 4794160 - | cold shock protein Sde_3796 4795953 - 4796351 + | hypothetical protein TERM 5141 4796372 - 4796356 - T 95 -5.7 -5.65927 | overlap 4796357 TACCGAAATAAAAAA GCCCGGC ATA ACCGGGT AGAGAGCTTACTGAC TERM 5142 4796371 - 4796357 - T 83 -9.2 -3.9793 | overlap 4796356 ACCGAAATAAAAAAG CCCGGC ATA ACCGGG TAGAGAGCTTACTGA Sde_3797 4797158 - 4796478 - | undecaprenyl-phosphate galactosephosphotransferase TERM 5143 4797369 - 4797395 + r 71 -10.1 -2.69725 | opp_overlap 4797370, overlap 4797368 4797367 GAAACGTAAAAAAAA AGCCAGTGCGG GTTTA TCGCACTGGCC AATTTGTTTTTAACC TERM 5144 4797394 - 4797370 - R 100 -12.9 -6.17292 | opp_overlap 4797369 4797368 4797367 AAACGTAAAAAAAAA GCCAGTGCG GGTTTAT CGCACTGGC CAATTTGTTTTTAAC Sde_3798 4798684 - 4797422 - | diguanylate cyclase/phosphodiesterase TERM 5145 4798060 - 4798070 + g 74 -6.8 -4.27467 | ATCCGCTGCGACAGT TGCC CTT GGCA TTTATATTGGTATTA Sde_3799 4799617 - 4798889 - | hypothetical protein TERM 5146 4801123 - 4801113 - g 72 -8.2 -3.68619 | GGCAATGTAGTTAAA GCCG CAT CGGC ACTTGGGGTAAGCCC Sde_3800 4799721 - 4801187 + | response regulator receiver domain-containing protein TERM 5147 4802163 - 4802139 - g 72 -5 -4.57073 | gap 1, overlap 4802141 CAGCTTCGCCAAAAA CG-CTGGCGTA GGCC TAAGCCAGTCG ATAGTAACGGCCTAT TERM 5148 4802253 - 4802275 + G 75 -2.6 -5.09762 | overlap 4802256 4802259 TAGAAAAAAGGCGTT TACCTATGGC GCA GCCATTAGTG TTTTATTTATTGCGC Sde_3801 4801372 - 4802634 + | polysaccharide biosynthesis export protein-like Sde_3802 4802631 - 4803656 + | glucosyltransferase Sde_3803 4804618 - 4803692 - | histone-like DNA-binding protein TERM 5149 4804079 - 4804091 + g 76 -9.1 -3.68261 | TTTGTATTTAATTTC GCTGG ATA CCAGC TTTAGCGTATTCTGA Sde_3804 4805157 - 4804615 - | 4-hydroxybenzoate polyprenyl transferase Sde_3805 4806488 - 4805169 - | response regulator receiver domain-containing protein Sde_3806 4807126 - 4806515 - | histidine kinase TERM 5150 4807081 - 4807096 + g 73 -7.6 -4.02139 | opp_overlap 4807080 4807079, overlap 4807079 ATGTTAAACACAACG CCAGTA AAGG TACTGG TATTTTTAGCTTTGA Sde_3807 4808837 - 4807188 - | hypothetical protein TERM 5151 4808360 - 4808343 - G 83 -4.1 -5.4505 | overlap 4808345 GGCGGCAATAAAAAA GCCGATA CTTG TACCAGC GGTAAAAGAACCAAT TERM 5152 4808664 - 4808640 - G 79 -4.3 -5.16237 | gap 2 AATGCGATCAAAAAA CGC-CGC-GTC GTACT GACCGCGCGCG TAAGTAAGGTTGTCA Sde_3808 4809169 - 4810302 + | AraC family transcriptional regulator TERM 5153 4811146 - 4811132 - g 89 -6.4 -5.27477 | overlap 4811134 ACGGCAACGAAAAAA TACGCT TTG AGCGCA ACAACGGCTCTATTT TERM 5154 4811144 - 4811134 - g 74 -6.8 -4.26777 | overlap 4811132 GGCAACGAAAAAATA CGCT TTG AGCG CAACAACGGCTCTAT Sde_3809 4810744 - 4812582 + | Signal transduction histidine kinase-like Sde_3810 4812592 - 4814883 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Sde_3811 4816875 - 4814965 - | hypothetical protein Sde_3812 4817410 - 4816925 - | hypothetical protein TERM 5155 4817663 - 4817633 - R 79 -8.3 -4.13183 | overlap 4817634 AAAATGTAAATTAAA CCGACAGCCATGC GGTAA ACACAGCTGTCGA GAAAATAGAAATACA TERM 5156 4817662 - 4817634 - R 71 -9.6 -3.06283 | overlap 4817633 AAATGTAAATTAAAC CGACAGCCATGC GGTAA ACACAGCTGTCG AGAAAATAGAAATAC Sde_3813 4818264 - 4817701 - | hypothetical protein Sde_3814 4818604 - 4818278 - | hypothetical protein Sde_3815 4818959 - 4818675 - | hypothetical protein TERM 5157 4818947 - 4818935 - G 76 -4.8 -4.81523 | AAGTAAAAAGCAAAA CTGC GACGA GCAG AATACGATTCATAAA Sde_3816 4819615 - 4819058 - | peptidase S26A, signal peptidase I Sde_3817 4819830 - 4819612 - | XRE family transcriptional regulator Sde_3818 4820262 - 4819834 - | hypothetical protein TERM 5158 4820936 - 4820910 - g 76 -11.7 -2.57564 | opp_overlap 4820909 4820915, overlap 4820909 GCATTTCGGTAGAAG CGCTACACAAG TTGTG CTTGTATAGCG GCTTAGCAGGGGCGG Sde_3819 4820498 - 4821001 + | hypothetical protein Sde_3820 4821615 - 4820998 - | two component LuxR family transcriptional regulator Sde_3821 4822754 - 4821612 - | sensor histidine kinase, putative TERM 5159 4822579 - 4822553 - G 77 -3.7 -5.243 | overlap 4822557 GAAAGTAGCAAAAAA CAAATACGGCA TAAGT TGCCATACCCG CTAACAAACGCGTTG TERM 5160 4822575 - 4822557 - G 78 -5.3 -5.0917 | overlap 4822553 GTAGCAAAAAACAAA TACGGCA TAAGT TGCCATA CCCGCTAACAAACGC TERM 5161 4822687 - 4822661 - G 78 -5.7 -4.89009 | overlap 4822662 4822663 AGAGCGAAGCAAAAA TCCAGCGCGGC GGGCG GCGGCGCTGAT AATGCCTGCGGGTAA TERM 5162 4822686 - 4822662 - G 72 -9.2 -3.52321 | overlap 4822661 4822663 GAGCGAAGCAAAAAT CCAGCGCGGC GGGCG GCGGCGCTGA TAATGCCTGCGGGTA TERM 5163 4822685 - 4822663 - G 71 -10.5 -2.7067 | overlap 4822662 4822661 AGCGAAGCAAAAATC CAGCGCGGC GGGCG GCGGCGCTG ATAATGCCTGCGGGT Sde_3822 4823329 - 4822793 - | hypothetical protein TERM 5164 4823120 - 4823103 - G 76 -4.8 -4.89519 | ATAAGAGAAAACAAA GCCGCT ATGTGA AACGGC CCGAATACAAACAAG TERM 5165 4823456 - 4823482 + r 75 -7.3 -4.386 | gap 1 ACCTGCCAGTGCTTG CTGC-GCCAAAC CATA GTTGGGCTGCAG TTTTATAGACGCTTC Sde_3823 4824121 - 4823435 - | hypothetical protein Sde_3824 4824403 - 4825173 + | hypothetical protein Sde_3825 4825224 - 4826075 + | response regulator receiver domain-containing protein Sde_3826 4826078 - 4826674 + | hypothetical protein TERM 5166 4826939 - 4826923 - g 70 -9.4 -3.30619 | overlap 4826910 AACTACCTCGCAGAA GGCAGC CCCCT GCTGCC CCAAGACCCATTACA Sde_3827 4826695 - 4827321 + | putative glutathione S-transferase TERM 5167 4827550 - 4827565 + G 79 -10.4 -3.53012 | CAGAAATTCAAGCCG GTGGCG GTTA CGCCAC TTTGAACGACGGCCA Sde_3828 4827387 - 4827647 + | cold-shock DNA-binding protein family protein TERM 5168 4827674 - 4827700 + T 73 -10.1 -2.94144 | overlap 4827671 CTGTAAGCAAGTGTA CCCGCATTGCG CAGTT TGCATTGCGGG TGATTTAACTAACGC Sde_3829 4828392 - 4827709 - | hypothetical protein TERM 5169 4828095 - 4828106 + g 73 -4.4 -4.88407 | CCGTGGTAACCAACT CAGT TTCT ACTG TTTTTACTTCACTAA Sde_3830 4828575 - 4828889 + | hypothetical protein TERM 5170 4828883 - 4828913 + T 80 -9.8 -3.61894 | opp_overlap 4828883 GGGAATAAAAAAGAG TTGCTAGTTGCTAG TTG CTAGTTGCTAGCAA TTATTGAACAACATT Sde_3831 4831038 - 4828990 - | diguanylate cyclase/phosphodiesterase Sde_3832 4831586 - 4831035 - | hypothetical protein Sde_3833 4833599 - 4831596 - | Outer membrane receptor for ferrienterochelin and colicins-like TERM 5171 4834870 - 4834901 + G 70 -2.2 -4.95876 | gap 1, overlap 4834872 4834874 GTTTGGTTATTGCAG TATTTGCC-GAAGCC TTA GGCTACCGGCATATC TTTTTGATTATGATT Sde_3834 4833852 - 4834967 + | sugar efflux transporter TERM 5172 4835069 - 4835105 + T 86 -3.1 -5.63517 | gap 1, opp_overlap 4835074 4835076, overlap 4835076 ACAGGGAACAGGGAA TGAAACAGGCTTGGCG ATTTTC CGTCAAGCCT-TTTGG TTTTTTCTTTACAAC TERM 5173 4835076 - 4835099 + T 100 -10.3 -4.9251 | opp_overlap 4835074 4835076, overlap 4835069 ACAGGGAATGAAACA GGCTTGGCG ATTTTC CGTCAAGCC TTTTGGTTTTTTCTT TERM 5174 4835099 - 4835076 - T 73 -8.8 -3.56006 | opp_overlap 4835076 4835069, overlap 4835074 ACAGGGAATGAAACA GGCTTGGCGA TTTT CCGTCAAGCC TTTTGGTTTTTTCTT Sde_3835 4836415 - 4835138 - | excitatory amino acid transporter Sde_3836 4836846 - 4836571 - | nucleoid protein Hbs Sde_3837 4836982 - 4837881 + | 4-hydroxybenzoate octaprenyltransferase TERM 5175 4838663 - 4838674 + G 77 -7.2 -4.46926 | CAAACTGTGCGTGGT GCGG GTTA CCGC TTTTCTAATAAGGTC Sde_3838 4838000 - 4838704 + | response regulator receiver domain-containing protein TERM 5176 4838813 - 4838825 + G 74 -3.4 -5.03715 | CAGCCATAGTTGGCG TAGC AGTAG GCTA TTTTTTGGCAGTAAT Sde_3839 4838740 - 4840044 + | two-component sensor PhoR TERM 5177 4840049 - 4840076 + T 73 -9.9 -3.01924 | opp_overlap 4840050 GCGCAAAATAAATAA ACGCGGCAATT ACTTAC AATTGCCGCGC TCTTCACACACGGTA TERM 5178 4840075 - 4840050 - T 100 -14.1 -4.8743 | opp_overlap 4840049 CGCAAAATAAATAAA CGCGGCAATTA CTTA CAATTGCCGCG CTCTTCACACACGGT Sde_3840 4840549 - 4840058 - | hypothetical protein TERM 5179 4840478 - 4840464 - G 72 -8.5 -3.69068 | overlap 4840462 GCATGGGAATAAATA GGCGG GTCTG CCGCC AATGCACTCACCGAA TERM 5180 4840832 - 4840820 - g 83 -9.1 -4.25056 | overlap 4840824 GACTGCACCAATAAA GCCAG CGG CTGGC AGCCGCACCACCTAA TERM 5181 4840838 - 4840824 - g 74 -11.4 -2.77283 | overlap 4840820 GCACCAATAAAGCCA GCGGCT GGC AGCCGC ACCACCTAACGGTTA Sde_3841 4840682 - 4841932 + | hypothetical protein Sde_3842 4842572 - 4843075 + | hypothetical protein Sde_3843 4843079 - 4844224 + | hypothetical protein Sde_3844 4844952 - 4844275 - | hypothetical protein TERM 5182 4844534 - 4844545 + g 79 -4.4 -5.24799 | opp_overlap 4844534 ACAGAGTTCAGCATA GCAA AGCC TTGC TTTTTATATTTATCG TERM 5183 4845058 - 4845074 + r 89 -6.6 -5.27206 | opp_overlap 4845060 AGACATTTATTAGCA TAGCCT ATATG AGGCTA TTTTTCTTCTATATA TERM 5184 4845502 - 4845466 - R 93 -12.6 -3.13432 | opp_overlap 4845471, overlap 4845471 TCTAATACCAGCTAA TAAAAGAGTAAACACC TAAAC GATGCTTACTCTTTTA ACATGGTAATAAATG TERM 5185 4845497 - 4845471 - R 86 -8.1 -4.69053 | opp_overlap 4845471, overlap 4845466 TACCAGCTAATAAAA GAGTAAACACC TAAAC GATGCTTACTC TTTTAACATGGTAAT Sde_3845 4847197 - 4845524 - | hypothetical protein Sde_3846 4849248 - 4848217 - | methylated-DNA-(protein)-cysteine S-methyltransferase TERM 5186 4849284 - 4849270 - R 76 -2.8 -5.29445 | CCCTAACAACAAAAA TAATCC ATA GGATTC AATTAGAAGTAATTT TERM 5187 4849340 - 4849325 - R 71 -6.8 -4.2109 | TAATATAGATACAAA GCCAGC TAAC GCTAGC CTCTAACTGGAAGGT TERM 5188 4849407 - 4849389 - R 82 -10.2 -3.65135 | overlap 4849383 4849390 CTTAAATAAGCACAA TGGTGGGC ACC GCCCACCT GAACATAACTTTAAA TERM 5189 4849406 - 4849390 - R 93 -13.7 -2.78358 | overlap 4849389 4849383 TTAAATAAGCACAAT GGTGGGC ACC GCCCACC TGAACATAACTTTAA Sde_3847 4850194 - 4849496 - | TonB-dependent receptor TERM 5190 4849867 - 4849893 + g 83 -9.6 -4.03413 | GTACTTTTACTTGGC TTGTATCTGG CCTGTCA CCAGATACAA TTTCTATAGAAGAAT Sde_3848 4851180 - 4850308 - | Pectate lyase/Amb allergen Sde_3849 4852065 - 4851331 - | hypothetical protein Sde_3850 4852681 - 4852280 - | hypothetical protein TERM 5191 4852475 - 4852455 - G 73 -11.3 -2.59447 | overlap 4852454 4852452 GCCGAACCACAACAC CCACAAAAA GCT TTTTTGTGG CGGGTACCAGGCAGG Sde_3851 4854096 - 4853500 - | chromate transporter TERM 5192 4853732 - 4853742 + g 82 -5.4 -5.18561 | opp_overlap 4853732 GCGGTAGGCAATTCA TTCG CTT CGAA TTTTTTAGCTATTTC TERM 5193 4854002 - 4854013 + g 73 -4.4 -4.77079 | opp_overlap 4854002 GCTTCACTCGCATAA GCAA TCTC TTGC TTTTCTTCGTCTGTA TERM 5194 4854213 - 4854188 - R 71 -9.7 -2.72144 | opp_overlap 4854188, overlap 4854187 TTATTGCTGTCAAAC GGTGACTGTGA GCAG CCACAGGCACC TAATTTAAACATATG TERM 5195 4854868 - 4854880 + r 71 -4.1 -4.82667 | ACTTGTCGATACGGA GCTGT TTG ATAGC TTTTTCATATCATGG Sde_3852 4855620 - 4854982 - | UbiE/COQ5 family methlytransferase TERM 5196 4855673 - 4855683 + r 71 -4 -4.78572 | opp_overlap 4855673 4855676 ACTTCAGTCAGCAAA TGAT CCA ATCA TTTTATTGCTTGGAA TERM 5197 4855797 - 4855765 - R 73 -8.5 -3.62046 | CCATTTTGCGAAGAA CATTTGTGTATTAGC GTA GCGACCACACAAATG AGCGTATTAAAATGG Sde_3853 4856268 - 4855825 - | hypothetical protein TERM 5198 4856312 - 4856289 - R 100 -14.6 -3.63569 | gap 1, opp_overlap 4856295 4856298 TTAACGCGTCAATAA CCGG-CGCAGC TTT GCTGCGTCCGG CGCCGAAGGCGCGAA Sde_3854 4856691 - 4856341 - | hypothetical protein TERM 5199 4856726 - 4856753 + H 100 -11.4 -4.86731 | GGCCCTTGTTAAGGT TGTAACTGTCCC AGCG GGGACAATTACA TTTTATTTAAGGAGA TERM 5200 4857107 - 4857083 - H 100 -18.7 -3.8822 | opp_overlap 4857077 4857076 4857085 GAGAGTAAATCTAAA GAGTCTGAGGC TAT GCCTCAGACTC CTTGCAGGCTTTAGC TERM 5201 4857085 - 4857105 + H 100 -15.5 -2.72855 | opp_overlap 4857083, overlap 4857077 4857076 GAGTAAATCTAAAGA GTCTGAGGC TAT GCCTCAGAC TCCTTGCAGGCTTTA TERM 5202 4858055 - 4858031 - g 83 -6.5 -5.03314 | gap 1, opp_overlap 4858031 TTGACTCGGAAAAAA TCGCACGCAT TATGAG ATGCG-GCGA TTTCCCTCTCGCCTA Sde_3855 4857628 - 4858761 + | haem catalase/peroxidase Sde_3856 4860180 - 4859257 - | hypothetical protein TERM 5203 4860210 - 4860258 + r 93 -11 -4.17556 | opp_overlap 4860209, overlap 4860253 4860257 ATTGGTACACGTAAC GCC-GCCAGCAGGGGCTAGAGCAC GCA GTGCGGAAGTCCCT-CTGGCTGGC TTTGTTAAAGCTCTG Sde_3857 4861408 - 4860275 - | putative cytoplasmic protein TERM 5204 4860661 - 4860637 - G 74 -10.9 -2.8007 | opp_overlap 4860637, overlap 4860634 GTAAGTCAGGAACCA CTTCAAGATCT GAT AAATCTTGAAG TTTAGTGTTATCAAA TERM 5205 4860637 - 4860661 + g 74 -8.7 -3.97088 | opp_overlap 4860637 4860634 GTAAGTCAGGAACCA CTTCAAGATCT GAT AAATCTTGAAG TTTAGTGTTATCAAA TERM 5206 4860867 - 4860884 + g 85 -12.7 -3.35695 | TGCTCCTGTATTTCG GCCTGCC TATA GGCAGGC TTCCCTTTATCTAGG TERM 5207 4863187 - 4863200 + G 76 -8.1 -4.07568 | TAGCCGCAGGGTGGC GCTGG CATC CCAGC TTTTACAACAAAACC Sde_3858 4862147 - 4863328 + | AraC family transcriptional regulator Sde_3859 4864520 - 4863417 - | cellulose binding, type IV Sde_3860 4865146 - 4864538 - | hypothetical protein TERM 5208 4865414 - 4865435 + H 95 -9.5 -4.43189 | ACGGGTAATTATGCA GCCTTCAAT AACT ATTGGAGGC TTTTATGAAATTCGT TERM 5209 4865461 - 4865473 + G 84 -4.8 -5.4505 | TTCGTATTGCTTGTT GTGC TTACC GCAC TTTTTTCTTCGCAGA TERM 5210 4865823 - 4865812 - g 72 -5.8 -4.44667 | TGCGGTAACAATAAA GTGG TGGG CCAC TGGTGGGATCATGTA Sde_3861 4865440 - 4866498 + | enterochelin esterase and related enzymes-like TERM 5211 4866569 - 4866587 + T 75 -10.2 -2.74817 | opp_overlap 4866570, overlap 4866568 4866565 4866564 ACGAAAAGATATAAA AGGTGGGC AGT GCCCACCC GTTGGTTTAATAGTT TERM 5212 4866586 - 4866570 - T 100 -13.7 -4.78933 | opp_overlap 4866569 4866568 4866565 4866564 CGAAAAGATATAAAA GGTGGGC AGT GCCCACC CGTTGGTTTAATAGT Sde_3862 4868349 - 4866601 - | hypothetical protein Sde_3863 4870764 - 4869208 - | hypothetical protein Sde_3864 4871725 - 4871039 - | ion transporter Sde_3865 4872332 - 4871727 - | hypothetical protein TERM 5213 4872285 - 4872298 + g 73 -2.3 -5.10033 | opp_overlap 4872285 AATAAGGGTATCTAA TTGCC TATC GGCTA TTTTATTTCTGTTGA TERM 5214 4872602 - 4872580 - R 73 -10.6 -2.54896 | opp_overlap 4872577 4872572, overlap 4872576 GTTTTAGGTAAGGTA GGCCATTCGA TAT TTGAATGGCC TCGTACTTGTTTAGT Sde_3866 4873241 - 4872672 - | hypothetical protein Sde_3867 4873484 - 4874014 + | response regulator receiver domain-containing protein TERM 5215 4874096 - 4874107 + T 73 -7.2 -4.09864 | ATGGTCGCGCCGGAA GGCG GCTT CGCC TTTTCCGGCCTACGT TERM 5216 4874170 - 4874148 - T 74 -7.7 -3.93782 | TCATCGAATAGTAAA GGGCGCATA TTAAT TATGCGCGC GCTCAGTTTAAATTT Sde_3868 4874874 - 4874203 - | hypothetical protein TERM 5217 4874409 - 4874397 - G 72 -2.6 -5.08088 | AATTGCCAATAAAAA CCAC TTCAC GCGG CCTAACAGTAAACGT TERM 5218 4874523 - 4874560 + g 71 -7.9 -3.97368 | gap 1, opp_overlap 4874518, overlap 4874527 TGATGCTAAAGGCGC TTATCGCATATTCGCCCG GGG TGAGTGAATATGCG-TAA TTTGTAAATTGAGGG TERM 5219 4874527 - 4874557 + g 75 -11.2 -3.04203 | opp_overlap 4874518, overlap 4874523 GCTAAAGGCGCTTAT CGCATATTCGCCCG GGG TGAGTGAATATGCG TAATTTGTAAATTGA TERM 5220 4875054 - 4875026 - H 70 -8.1 -3.71527 | TGTTAACCATTTAAA TTGGCGCGCGC GTCTACT GCGCGCATCAA AAAACGTTAAACAGT Sde_3869 4875187 - 4875660 + | hypothetical protein TERM 5221 4875681 - 4875714 + T 86 -10.5 -3.76411 | gap 1, opp_overlap 4875688, overlap 4875672 4875682 4875683 4875685 TTGACTATCGCTAGT TA-GAGTAGCTCAAAC ATG GTTTGGGCTACTCCTG TTTAGCTACTTTTAA TERM 5222 4875682 - 4875712 + T 100 -13.4 -3.45527 | opp_overlap 4875688, overlap 4875681 4875672 4875683 4875685 TGACTATCGCTAGTT AGAGTAGCTCAAAC ATG GTTTGGGCTACTCC TGTTTAGCTACTTTT TERM 5223 4875683 - 4875711 + T 100 -16.9 -2.66232 | opp_overlap 4875688, overlap 4875682 4875681 4875672 4875685 GACTATCGCTAGTTA GAGTAGCTCAAAC ATG GTTTGGGCTACTC CTGTTTAGCTACTTT TERM 5224 4875685 - 4875709 + T 93 -13.7 -2.86391 | opp_overlap 4875688, overlap 4875683 4875682 4875681 4875672 CTATCGCTAGTTAGA GTAGCTCAAAC ATG GTTTGGGCTAC TCCTGTTTAGCTACT TERM 5225 4875817 - 4875805 - T 70 -2.7 -5.07652 | overlap 4875800 GTTGCTAAAATAAAA CTAAT TTT ATCAG GTTAATTAAAAAAGG TERM 5226 4875830 - 4875850 + T 70 -5.4 -4.54047 | opp_overlap 4875831, overlap 4875831 CAGGTTAATTAAAAA AGGCTTCA ACCAG TGAAGCCC TTTTATGTAACATAA TERM 5227 4875831 - 4875849 + T 71 -8.9 -3.31946 | opp_overlap 4875831, overlap 4875830 AGGTTAATTAAAAAA GGCTTCA ACCAG TGAAGCC CTTTTATGTAACATA TERM 5228 4875849 - 4875831 - T 100 -8.9 -5.27477 | opp_overlap 4875830 4875831 AGGTTAATTAAAAAA GGCTTCA ACCAG TGAAGCC CTTTTATGTAACATA Sde_3870 4879751 - 4875936 - | glycosyl hydrolase family chitinase TERM 5229 4878609 - 4878597 - G 70 -4.8 -4.40963 | overlap 4878598 ACGGCTTAAAAAGAA CGCA CCGCC TGCG CCAGCAATGGTAACT TERM 5230 4879845 - 4879856 + H 70 -5.8 -4.39166 | opp_overlap 4879835 4879840 4879845 CAAAAGACCACTAAA TGGC CTAG GCCA TTTTGCTATGTGAAG TERM 5231 4880668 - 4880638 - g 79 -4.1 -5.21709 | gap 2, overlap 4880639 4880649 GCCTATACTAAAAAA GGGCCAGTACATACC CGA GGTATAC-CTG-CCC GCGGTAAATACCATT Sde_3871 4880084 - 4880767 + | hypothetical protein Sde_3872 4880764 - 4882734 + | phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like TERM 5232 4882923 - 4882909 - f 70 -7.8 -3.62775 | opp_overlap 4882908 ATTAGGCGCCAACAA CCGTCC ACG GAACGG AATTTGGCAGTTACA TERM 5233 4883584 - 4883574 - g 72 -8.2 -3.69323 | opp_overlap 4883580 CTACCAGCAGCGAAA GCCC GTT GGGC AATGTGGCCATTGTA TERM 5234 4883668 - 4883697 + G 88 -7.9 -5.0133 | CAACCACGGAGTACG CCCAGCCAGTATT AGCA AATACTGCATGGG TTTTTTACAGGCGTC TERM 5235 4883772 - 4883754 - g 86 -5.2 -5.47821 | overlap 4883740 4883756 ATCGATTTAAAAAAA TCGCCCAC CGG GTGGCCAA AATCCAAAACACCAG Sde_3873 4883000 - 4883803 + | hypothetical protein Sde_3874 4883806 - 4884372 + | hypothetical protein Sde_3875 4884379 - 4885509 + | phosphate-selective porin-like TERM 5236 4886974 - 4886991 + G 79 -4.1 -5.26875 | GCCGTGGTAACCTTA GTTACCG AACC CAGTAAC TTTTTTGATTACACA Sde_3876 4885534 - 4888377 + | hypothetical protein TERM 5237 4888438 - 4888380 - T 100 -14.9 -2.71712 | opp_overlap 4888429, overlap 4888379 CCCCGGCTCTTAAAT GCGCCACCTACTTGCACAGCGTTTA-GTA AGT TGCATAAACGCTGTGCAAGTAGGCACC-C CCACCTCTTTCATTC Sde_3877 4889335 - 4888610 - | hypothetical protein TERM 5238 4888679 - 4888697 + g 82 -11.8 -3.34812 | overlap 4888678 TAACTTGTTCCATGT TATGCGCA GGT TGCGCATA TATTCGTTATCTTCT TERM 5239 4889740 - 4889765 + r 86 -7.7 -4.69326 | opp_overlap 4889740 AATAAAGAAAAGTGA GAGGTTTAG ACGGCACA CTAAACCTC TTTTGTATTGGATGT Sde_3878 4890167 - 4889796 - | hypothetical protein TERM 5240 4890041 - 4890087 + g 83 -2.3 -5.75478 | gap 1 GCAGGGTCATATCAT CGAATGAGCTGTAAATATCGCG ATAT CGCTCTATTT-CGGTACGTTCG TTTTTTTCTATGATT Sde_3879 4891228 - 4890347 - | transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase TERM 5241 4890839 - 4890875 + g 73 -2.2 -5.09762 | gap 1, opp_overlap 4890831 4890864, overlap 4890831 4890841 4890864 GCCAAAAGGCGAGCT GT-GGGCGCCGTATT CTATTGTT AAACCGGCGCCCTGC TTTTTGTATTCGCCT TERM 5242 4891368 - 4891349 - R 100 -12.2 -5.75945 | AGGCGCCAAAAAAAA CGGCTACT AAAA AGTAGCCG CATAAATCGAACGAA Sde_3880 4894168 - 4891463 - | TonB-dependent receptor TERM 5243 4892643 - 4892654 + g 73 -2.2 -5.26119 | overlap 4892638 TCGGTCATTACAAAA CTTG TAGG CGAG TTTTCTTTTTCGCGA TERM 5244 4895520 - 4895533 + G 70 -2.3 -5.07486 | TTCCTCTAGTAGTAC CAGCG GCGG CACTG TTTTTGTTCCACCTA TERM 5245 4896928 - 4896911 - g 72 -6.2 -4.29176 | ACAGTGAAGGCAAAA CGGCCA TTATCG CGGCCG CGCCATCGACTTGTC Sde_3881 4894705 - 4896948 + | Pectate lyase-like Sde_3882 4900097 - 4897212 - | beta-galactosidase TERM 5246 4897806 - 4897792 - G 77 -7 -4.49958 | opp_overlap 4897793, overlap 4897793 AGCCCATTAAATAAA TGGCGC GTT GCGCCT TTCTCATCCTCGTGG TERM 5247 4897805 - 4897793 - G 74 -10.5 -3.29252 | opp_overlap 4897793, overlap 4897792 GCCCATTAAATAAAT GGCGC GTT GCGCC TTTCTCATCCTCGTG TERM 5248 4897793 - 4897805 + g 84 -10.5 -4.00038 | opp_overlap 4897793 4897792 GCCCATTAAATAAAT GGCGC GTT GCGCC TTTCTCATCCTCGTG TERM 5249 4898683 - 4898665 - G 83 -4.4 -5.41746 | AAGTCGCTAAAAAAA CCGCCGTT CAT AGCTGCGG TTACGGGGCGTGTAT TERM 5250 4900697 - 4900676 - H 71 -4.5 -4.58297 | gap 1, overlap 4900678 4900682 TATGAAAAATATAAA TGGAAACGAC TTG GTCGCTTC-A GACGGATAACAAACT TERM 5251 4900786 - 4900761 - H 100 -11.3 -4.93696 | opp_overlap 4900760 4900759 GCGAAAGATCAAAAA TGCTCAATTCA TGGA CGAATTGAGCA CGTTATAGGGACATA TERM 5252 4901507 - 4901519 + G 78 -6.2 -4.72272 | opp_overlap 4901507 4901506 TACTTCATATTAAAG CGGC AAATG GCCG TTTTTACTGCGGAGA Sde_3883 4901050 - 4901622 + | hypothetical protein Sde_3884 4902820 - 4901657 - | chromate resistance protein-related protein TERM 5253 4902391 - 4902366 - G 77 -10.4 -3.42564 | overlap 4902364 4902360 ATTAATAAAGCAATA GCCGTCGCCA GCGCTA TGGCCACGGC AAGGCGAGTTGTGCA TERM 5254 4902676 - 4902662 - G 72 -5 -4.56597 | TGGGCCGGGCAAAAA TTGACT AAG AGCCAA CAGACGGGCAAAGGC Sde_3885 4903081 - 4903809 + | TetR family transcriptional regulator TERM 5255 4904065 - 4904054 - g 72 -5.8 -4.43911 | overlap 4904055 AAAGCGCAACTAAAA CTCG ACCA CGAG GCCGAAATAGGGCGC Sde_3886 4903859 - 4905301 + | unusual protein kinase-like Sde_3887 4906026 - 4905424 - | hypothetical protein TERM 5256 4906321 - 4906339 + r 100 -10.3 -4.75174 | opp_overlap 4906321 TTTAAAACAAAAAAA GCCCGAA GAGCA TTCGGGC TTTTTACATTAGCTG TERM 5257 4906339 - 4906321 - R 100 -10.3 -6.09196 | opp_overlap 4906321 TTTAAAACAAAAAAA GCCCGAA GAGCA TTCGGGC TTTTTACATTAGCTG Sde_3888 4908591 - 4906375 - | catalase TERM 5258 4908339 - 4908354 + g 71 -7.6 -3.97051 | CGGGCCACCAATCCT GTGATG CGGT CATCAC TTGTTTAAGATCTTT TERM 5259 4908982 - 4908971 - R 82 -3 -5.56264 | overlap 4908975 4908976 TGCAAACACAAAAAA CAAA CGTA TTTG AAATACAAAATCTTT TERM 5260 4908989 - 4908975 - R 77 -3.6 -5.19003 | overlap 4908971 4908976 AACACAAAAAACAAA CGTATT TGA AATACA AAATCTTTCACCACC TERM 5261 4909500 - 4909443 - R 100 -21.1 -3.89334 | gap 1, opp_overlap 4909443 4909443 AAATACTATAGGAAA CTCTGATTAACCCCAATTGCTTTTTG CGAGAGC CAAAAAGCG-TTGGGGTTAATCAGAG GTTCCTATATAAATT TERM 5262 4909443 - 4909501 + r 100 -17.3 -3.33708 | opp_overlap 4909443, overlap 4909443 AAATACTATAGGAAA -CTCTGATTAACCCCAATTGCTTTTTG CGAGAGC CAAAAAGC-GTTGGGGTTAATCAGAGG TTCCTATATAAATTA TERM 5263 4909443 - 4909500 + r 100 -23.3 -2.59743 | gap 1, opp_overlap 4909443, overlap 4909443 AAATACTATAGGAAA CTCTGATTAACCCCAATTGCTTTTTG CGAGAGC CAAAAAGC-GTTGGGGTTAATCAGAG GTTCCTATATAAATT TERM 5264 4910042 - 4909997 - R 88 -10.1 -4.11295 | gap 1, opp_overlap 4910007, overlap 4910013 TGAAATTGATATAAA GGGCAATTAATACAAACAAATA CCG TATTTAATTGTATTA-CTGCCC CTAACCTTAAACGCT Sde_3889 4910508 - 4910056 - | hypothetical protein Sde_3890 4911142 - 4910534 - | EAL TERM 5265 4911361 - 4911347 - g 72 -5.6 -4.47611 | overlap 4911349 GACGATAAAAAAATA GGGCTG TTA CAGCGC GCAGTGGTAAATTTT TERM 5266 4911602 - 4911592 - g 73 -2.4 -5.26119 | CCTGCAAAAACAAAA CGAC AAA GACG ATGCACGCATAAAGT Sde_3891 4911329 - 4911781 + | hypothetical protein TERM 5267 4913038 - 4913028 - g 73 -4.6 -4.88495 | overlap 4913029 4913030 ACACACACAATAAAA GCGG TAG CCAC CGATAACGACGGCGA TERM 5268 4913080 - 4913064 - g 71 -7.3 -4.04806 | GGCGACACCAAACAA GCTAGCT TTA AGCTAAC GGTACGCGGTGCGGC TERM 5269 4913479 - 4913458 - g 76 -2.2 -5.42259 | overlap 4913460 4913472 GCACCGGTAAAAAAA CGTTACGC ATTCAA GCGCAAAG CGGAAACTTTAATTT Sde_3892 4912509 - 4914161 + | hypothetical protein TERM 5270 4914193 - 4914211 + F 100 -10.2 -4.564 | opp_overlap 4914193 4914191 ACACTTATTCAAACA GGGGGGCG CAA TGCCCTCC TTTTAGTTTACGCTT TERM 5271 4914357 - 4914346 - f 70 -7.2 -3.86107 | ATATCAACAACAGAA GCGG TTAA CCGC CATCTACTCAGCGAA Sde_3893 4914434 - 4914967 + | hypothetical protein Sde_3894 4915121 - 4915942 + | cellulose binding, type IV Sde_3895 4916037 - 4916528 + | sigma-24 (FecI-like) Sde_3896 4916525 - 4916962 + | hypothetical protein Sde_3897 4916973 - 4917491 + | hypothetical protein TERM 5272 4917505 - 4917495 - f 77 -4.6 -4.94992 | TTAAATCTATAAAAA CGCG TCG CGCA AAACGAAAAAACACA TERM 5273 4917892 - 4917869 - g 80 -6.8 -4.67982 | GTTGATCGAACAAAA TTGGCAAATA GCCG TATCCGCCAA AGAAGCCGACGGCGA Sde_3898 4917543 - 4918070 + | hypothetical protein TERM 5274 4918099 - 4918117 + F 91 -4.5 -5.72207 | overlap 4918091 4918090 TTGTATTCGCTGTTA GCGCC TTTTTAATT GGCGC TTTTTTTAGTTTAAA Sde_3899 4918498 - 4919067 + | hypothetical protein Sde_3900 4920010 - 4919225 - | response regulator receiver domain-containing protein TERM 5275 4919284 - 4919295 + g 78 -5.8 -4.74103 | CAAATTGTTTTTGCT CTCC TTCT GGAG TTTTTAAGTTGGCAA Sde_3901 4921142 - 4920015 - | putative regulator of cell autolysis-like Sde_3902 4922029 - 4921217 - | heavy metal efflux pump CzcA TERM 5276 4922062 - 4922083 + r 73 -8.8 -3.41569 | opp_overlap 4922065, overlap 4922065 GGTGTAATATTGTAG TAAGCCCT AGGCGG AGGGCTTA TCTTGTGTGTCTGTT Sde_3903 4922574 - 4922068 - | secretion protein HlyD TERM 5277 4923145 - 4923155 + G 80 -6.8 -4.63932 | GCCATTTATATTTTA TGGC GCC GCCA TTTTATTAAGCGGTA Sde_3904 4922903 - 4923289 + | hypothetical protein TERM 5278 4923383 - 4923400 + F 91 -7.7 -4.77775 | overlap 4923373 AGCACCCCATCACCG GCTGTGG GTTT CTACAGC TTTATTTTATGGAGT TERM 5279 4924228 - 4924243 + G 75 -3.2 -5.16237 | overlap 4924230 AGTAGCGGGTGGGGT GGCAAG TAAG CTTGGC TTTTTTGCTAAAATT Sde_3905 4923437 - 4924363 + | hypothetical protein TERM 5280 4924723 - 4924751 + G 75 -9.6 -3.50553 | opp_overlap 4924717, overlap 4924721 ATTTAAGGAGCCAGA CCTGTCTGCCAA GCTTA TTAGCAGGCAGG TATTTGATAATGTTG Sde_3906 4924541 - 4924903 + | GGDEF TERM 5281 4925260 - 4925272 + G 72 -5.5 -4.37544 | GAATCGGCGCCAGGG CCTGT AAT GCAGG TTTCTATTGTTGTGG Sde_3907 4924966 - 4925361 + | hypothetical protein TERM 5282 4925554 - 4925529 - T 100 -11.3 -4.93696 | opp_overlap 4925528 4925527 GTGAAAGATCAAAAA TGCTCAATTCA TGGA CGAATTGAGCA AGTTATAGGGACATA TERM 5283 4925752 - 4925701 - T 75 -10.2 -2.74144 | opp_overlap 4925700 4925694 4925699 4925737, overlap 4925700 TGGTTATTGCGAAAG CCCGATGGCGCTTTGCTTAT CGGGCCTACTAT AAAAGCATTGCGCCATCGGG ATGCTAATTAATTAG Sde_3908 4927649 - 4925760 - | MerR family transcriptional regulator TERM 5284 4925809 - 4925792 - G 78 -6.3 -4.62336 | gap 1, opp_overlap 4925792 4925791 4925794, overlap 4925794 AGTTTACTTCAAAAA TG-GCGGT AGT ACCGCTCA CTTCATTGCCCACTA TERM 5285 4927473 - 4927491 + g 79 -8.8 -4.14392 | AATAGCGATGGTGTT TGGCGTTG CAT CCACGCCA TTTTCGCCGTTCGAA TERM 5286 4927622 - 4927604 - G 73 -7.5 -4.17448 | opp_overlap 4927604 CAACTAAACTAGAAA TTAACGC AGCAA GCGTTAA TTGTTTGAACGTGGA TERM 5287 4927604 - 4927622 + g 71 -7.5 -3.92542 | opp_overlap 4927604 CAACTAAACTAGAAA TTAACGC AGCAA GCGTTAA TTGTTTGAACGTGGA Sde_3909 4929641 - 4927818 - | Na+/H+ antiporter TERM 5288 4928008 - 4928027 + g 76 -4.2 -5.07652 | opp_overlap 4928008, overlap 4928003 TTCTCTTCGGTAAAC GCCTCAGA TAAT TTTGTGGC TTTTATTTTAGCGCC Sde_3910 4930574 - 4929669 - | hypothetical protein Sde_3911 4931969 - 4930629 - | serine/threonine protein kinase TERM 5289 4930806 - 4930796 - G 74 -6.8 -4.26076 | GTATGTTCACCAAAA TGGC AAT GCCA ATAACTAAACCAATA TERM 5290 4931135 - 4931122 - G 70 -9.5 -3.00476 | opp_overlap 4931122 4931121 4931120, overlap 4931120 ATGCCCAACCACACA GCGCG GTTG CGCGC ACTTTTTATAACAGG Sde_3912 4933050 - 4932136 - | hypothetical protein TERM 5291 4933601 - 4933624 + G 83 -4.5 -5.33026 | GATTGGGCCGGTAGC GGTTACGCT TCCGAC AGCGAAGCC TTTTTGTTTAACTTA Sde_3913 4933280 - 4934035 + | hypothetical protein TERM 5292 4934078 - 4934100 + T 100 -6.3 -5.9362 | gap 1, opp_overlap 4934078 GCTTTGTTAAAAAAA CCGCC-GCAT GTAA ATGTAGGCGG TTTTTTTATGTTTTG TERM 5293 4934100 - 4934078 - T 81 -4.1 -5.40072 | gap 1, opp_overlap 4934078 GCTTTGTTAAAAAAA CCGCC-GCAT GTAA ATGTAGGCGG TTTTTTTATGTTTTG Sde_3914 4934735 - 4934148 - | hypothetical protein Sde_3915 4936409 - 4934757 - | glucosamine-fructose-6-phosphate aminotransferase, isomerising Sde_3916 4937250 - 4936462 - | regulatory protein, DeoR Sde_3917 4937303 - 4937620 + | hypothetical protein Sde_3918 4938056 - 4939285 + | hypothetical protein TERM 5294 4939322 - 4939347 + F 100 -11.9 -5.63517 | gap 1, opp_overlap 4939309 4939322 AAGCGCACTGTAAAA GCTCGC-CCAGT ACC ACTGGCGCGGGC TTTTTTATTTGAGCC TERM 5295 4939347 - 4939322 - f 88 -9.7 -4.14511 | gap 1, opp_overlap 4939322, overlap 4939309 AAGCGCACTGTAAAA GCTCGC-CCAGT ACC ACTGGCGCGGGC TTTTTTATTTGAGCC Sde_3919 4939413 - 4940234 + | hypothetical protein Sde_3920 4940480 - 4941583 + | helix-turn-helix, AraC type TERM 5296 4941712 - 4941694 - g 72 -8.8 -3.63761 | overlap 4941692 4941696 CAACTTATAGAAATA GATCGCCA AAT TGGCGAAC AAACCAAAGACGACT TERM 5297 4941710 - 4941696 - g 73 -10 -3.38696 | overlap 4941694 4941692 ACTTATAGAAATAGA TCGCCA AAT TGGCGA ACAAACCAAAGACGA TERM 5298 4941743 - 4941755 + G 83 -6.2 -5.00616 | GGGTAATTCAACCGC GCGG CTTTC CCGC TTTTTTGGAAAAGAC Sde_3921 4941673 - 4942695 + | hypothetical protein Sde_3922 4942756 - 4942986 + | hypothetical protein Sde_3923 4943436 - 4943050 - | diguanylate phosphodiesterase TERM 5299 4943081 - 4943095 + g 75 -11.4 -3.02144 | TGTTGCATTGGGTGC TGCCGC CAT GCGGCA TCTTGCACCCAATCC TERM 5300 4944051 - 4944037 - g 72 -5 -4.65078 | overlap 4944039 AGAGTTTGAACAAAA CATTCG AAA CGAATA CAAACGCGTGCCTAC Sde_3924 4943597 - 4944208 + | hypothetical protein Sde_3925 4944582 - 4944818 + | hypothetical protein TERM 5301 4944863 - 4944844 - T 100 -13.6 -4.44277 | opp_overlap 4944844 TACTAAAATGCAAAA GGGGAGCA ATAA TGCTCCCC TTGTATGAACGTAAC TERM 5302 4944844 - 4944863 + T 100 -13.6 -3.49475 | opp_overlap 4944844 TACTAAAATGCAAAA GGGGAGCA ATAA TGCTCCCC TTGTATGAACGTAAC Sde_3926 4945876 - 4944923 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 5303 4946161 - 4946137 - H 72 -7.9 -3.77241 | opp_overlap 4946136 4946153, overlap 4946153 AAATTTCAACGTAAA TCTGTACCACT TAA AGTGGGACAAA AATTAATTTTTGACC TERM 5304 4946469 - 4946417 - H 76 -7 -4.44392 | gap 1 ACAATAAAAACCAAA CAGAGTCCGTAAGGT-TGTTGGCAT TGGT ATGCGAACACACCGCGCGGCCCCTG TAGCAAGCTATAGGC Sde_3927 4946605 - 4948002 + | peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 TERM 5305 4948049 - 4948077 + F 100 -11.8 -5.09762 | TAAATAGTTCATAGC GTGGCGATATAC AATGC GTATACCGCCAC TTTTATTTATTAAAA Sde_3928 4948116 - 4948844 + | hypothetical protein TERM 5306 4949929 - 4949906 - g 71 -7.4 -3.93695 | opp_overlap 4949914 CGCATTATTTATAAA GTACTCGCCG GAGC CGGCAACTAC GAAACCGGTATTTGC Sde_3929 4949045 - 4950022 + | CBS domain-containing protein Sde_3930 4950315 - 4951517 + | hypothetical protein TERM 5307 4951857 - 4951840 - f 71 -8.5 -3.40899 | opp_overlap 4951843, overlap 4951843 4951844 AATTGGGTACTACAA CAATGGT AATC ACCATTG ATCGCCCCGATGAAA Sde_3931 4951842 - 4952357 + | hypothetical protein Sde_3932 4953629 - 4952493 - | H+-transporting two-sector ATPase, delta/epsilon subunit Sde_3933 4954062 - 4955249 + | ATP synthase F1, beta subunit Sde_3934 4955242 - 4958370 + | H+-transporting two-sector ATPase, gamma subunit TERM 5308 4958449 - 4958483 + T 100 -15.3 -3.32769 | gap 1, opp_overlap 4958457, overlap 4958452 ATAACAGCTTAGTTC TAACTCAAGGCGAGCA TTTA TG-TCGCCTTGAGTTA TTACTCGTTTACACC TERM 5309 4958452 - 4958480 + T 100 -12.6 -3.79909 | gap 1, opp_overlap 4958457, overlap 4958449 ACAGCTTAGTTCTAA CTCAAGGCGAGCA TTTA TG-TCGCCTTGAG TTATTACTCGTTTAC Sde_3935 4961620 - 4958492 - | ATP synthase F1, alpha subunit TERM 5310 4960340 - 4960360 + g 78 -5.3 -5.06505 | ATTTTTATCGGTTAG CTCACCGCC TTC GGCTTTGAG TTTTTCTATATGCTT TERM 5311 4960369 - 4960382 + g 72 -5.3 -4.55689 | CTTTGAGTTTTTCTA TATGC TTGT GCATA TTTTCTATCAGTACT TERM 5312 4961348 - 4961335 - G 72 -5.3 -4.56597 | TTTTTTCGTTAAAAA TTACG TAAA CGTAA GAATCGCCAAAAAAT TERM 5313 4961457 - 4961469 + g 84 -4.8 -5.3321 | ACTTGCGGTGCTTGG CCAG GGTAG CTGG TTTTTATTATTACTT Sde_3936 4963100 - 4961625 - | H+-transporting two-sector ATPase, delta (OSCP) subunit TERM 5314 4962235 - 4962217 - G 72 -8.1 -3.71649 | opp_overlap 4962216 4962217, overlap 4962210 TTTTTAAAGCGTAAA CGCACAC GGGCT GTGCGCG TTTTGGCATCGAGTG TERM 5315 4962666 - 4962656 - G 74 -8.2 -3.83771 | opp_overlap 4962656 AATAAAGCGAGTAAA GGGG CTG CCCC TTTTGTACAGGGTCG TERM 5316 4962656 - 4962666 + g 81 -8.2 -4.37886 | opp_overlap 4962656 AATAAAGCGAGTAAA GGGG CTG CCCC TTTTGTACAGGGTCG Sde_3937 4963655 - 4963149 - | ATP synthase F0, subunit B Sde_3938 4964199 - 4963828 - | ATP synthase F0, C subunit Sde_3939 4966167 - 4964401 - | response regulator receiver domain-containing protein TERM 5317 4966246 - 4966267 + r 76 -2.9 -5.2696 | ATTAAATAATGCACA CGACATTAG CTAA CTATAGTCG TTTTTTGGGTTTTAA Sde_3940 4966779 - 4966297 - | hypothetical protein Sde_3941 4967242 - 4966856 - | MerR family transcriptional regulator TERM 5318 4967053 - 4967040 - G 76 -8.1 -4.11216 | opp_overlap 4967040 GGCGCATCCCTAAAA GCCAG TAGG CTGGC TATATCGTCTAAACT TERM 5319 4967649 - 4967639 - g 74 -5.4 -4.7254 | ACGCGTTAGCAAAAA TAGC ATT GCTA GAAAAACAGAATATC Sde_3942 4967557 - 4968189 + | hypothetical protein TERM 5320 4968769 - 4968780 + F 71 -4.4 -4.84918 | TCTCCTGCGTATACT CTTG TTAG CAAG TTTTATCTTTCTGCC Sde_3943 4968820 - 4970136 + | hypothetical protein TERM 5321 4970133 - 4970146 + T 84 -3.9 -5.56673 | ACGCTGGCTTTTTGA CTAAA ATAT TTTAG TTTTTTCTTCTACGT TERM 5322 4970184 - 4970242 + T 70 -5.5 -4.56775 | gap 2, opp_overlap 4970199, overlap 4970199 TAGTCACGTCTAAAT ATATTG-ATTTAAAAAGCCCCTGTG-AGC AAT GCTGCACAGGGGCTTTTTAAAGACCGGAA TTTTTAGCGCCGAGT TERM 5323 4970226 - 4970199 - T 100 -16.4 -4.67755 | gap 1, opp_overlap 4970184 4970199 ATATTGATTTAAAAA GCCCCTGTG-AGC AAT GCTGCACAGGGGC TTTTTAAAGACCGGA TERM 5324 4970199 - 4970226 + T 100 -16.4 -4.56597 | gap 1, opp_overlap 4970199, overlap 4970184 ATATTGATTTAAAAA GCCCCTGTG-AGC AAT GCTGCACAGGGGC TTTTTAAAGACCGGA Sde_3944 4972370 - 4970268 - | Serine/threonine protein kinase-like TERM 5325 4970977 - 4970999 + g 71 -3.4 -4.81551 | overlap 4970978 TGATCAATTAATGAT TTTGGCATCA TTT TGATGGCAAC TTTTTCATCTAGCTC Sde_3945 4973428 - 4972370 - | hypothetical protein TERM 5326 4973529 - 4973513 - H 70 -5.1 -4.47328 | AACTGGATGACAAAA CGGCT CACTTGT AGCCG ATAAAACAAAATGGG TERM 5327 4974722 - 4974702 - g 79 -2.6 -5.36441 | opp_overlap 4974704, overlap 4974703 4974704 CTGTTAGATAAAAAA CGTTAC TTGCCCGCC GTAACG CAAGGCTGGCAAGCA Sde_3946 4973721 - 4974890 + | hypothetical protein Sde_3947 4974930 - 4976186 + | hypothetical protein TERM 5328 4976451 - 4976485 + T 86 -12.3 -2.50291 | gap 1, opp_overlap 4976456, overlap 4976456 4976484 AACCTACTTGCTACA AAAAAGGCCGCT-GGA TAAA TCCTAGCGGCCTTTTC ATTAGTCGAATGATT TERM 5329 4976480 - 4976456 - T 100 -12.2 -5.24531 | gap 1, opp_overlap 4976451 4976456 ACTTGCTACAAAAAA GGCCGCT-GGA TAAA TCCTAGCGGCC TTTTCATTAGTCGAA TERM 5330 4976456 - 4976480 + T 100 -12.2 -4.45544 | gap 1, opp_overlap 4976456, overlap 4976451 ACTTGCTACAAAAAA GGCCGCT-GGA TAAA TCCTAGCGGCC TTTTCATTAGTCGAA Sde_3948 4978353 - 4976518 - | glutamine--fructose-6-phosphate transaminase TERM 5331 4976744 - 4976754 + g 73 -4 -4.82678 | CGTGCGCGTACTTCC TCTA CGT TAGA TTTTAATTTTTCTAA TERM 5332 4977597 - 4977609 + g 77 -9.1 -3.86015 | opp_overlap 4977596 4977595 CTTTTAACATAAAGT GGCGA TAT TCGCC TTTGTCGCCGGCGTC TERM 5333 4978093 - 4978109 + g 70 -10.1 -3.06183 | GTTGGAAACGTGTGG GTGAGCG TTG CGCTCGC TTGGCTCGCCGTGGG Sde_3949 4979211 - 4978444 - | chitinase II TERM 5334 4980151 - 4980136 - R 100 -10.4 -5.4387 | opp_overlap 4980136 ACACAAAGCAAAAAA GGGAGC CGAA GCTCCC TTTTTATAAACACTC TERM 5335 4980136 - 4980151 + r 100 -10.4 -4.83615 | opp_overlap 4980136 ACACAAAGCAAAAAA GGGAGC CGAA GCTCCC TTTTTATAAACACTC Sde_3950 4980883 - 4980179 - | putative porin Sde_3951 4981395 - 4981066 - | hypothetical protein Sde_3952 4981594 - 4982199 + | DrgA protein TERM 5336 4982968 - 4982958 - g 88 -8.2 -4.82128 | CCAGTAAAGATAAAA GCGC ACT GCGC TCGCACGCTTGCGTA Sde_3953 4982375 - 4983238 + | AraC family transcriptional regulator TERM 5337 4983274 - 4983254 - T 93 -12.6 -3.05935 | opp_overlap 4983254 ATACTGTTTAGTTAA GCGGCACA TATAG TGTGCCGC TTTAATTATTTGCCA TERM 5338 4983254 - 4983274 + T 100 -13.3 -4.14764 | opp_overlap 4983254 ATACTGTTTAGTTAA GCGGCACAT ATA GTGTGCCGC TTTAATTATTTGCCA Sde_3954 4983952 - 4983293 - | putative transcriptional regulator TERM 5339 4983588 - 4983603 + g 79 -3.2 -5.36441 | opp_overlap 4983588 TTGCTTGCCAAATAC CCGC CTTTAGCC GCGG TTTTTTGTATAAGCG Sde_3955 4984084 - 4985019 + | LysR family transcriptional regulator Sde_3956 4986129 - 4985125 - | zinc-containing alcohol dehydrogenase family protein TERM 5340 4985384 - 4985372 - G 84 -10.5 -3.96705 | CCTACAAAATGTAAA CGCCC TTT GGGCG CAAGGGTAGCTAAAT TERM 5341 4985474 - 4985486 + g 70 -9.1 -3.35775 | overlap 4985475 GCTGCTTCTAGTTGT GCAGC ATC GCTGC TGTTTAGCACATGGT TERM 5342 4985594 - 4985584 - G 74 -5.4 -4.67353 | CCACGCATTTAAAAA TTGC AGT GCAA TATGCCCTAAACCAC TERM 5343 4986529 - 4986515 - g 72 -6.4 -4.36931 | TAAGCGATATTAAAA CACTGC AAA ACAGTG TATCCGGCCATTTAA TERM 5344 4986582 - 4986599 + G 80 -5.5 -5.0133 | opp_overlap 4986549, overlap 4986565 GGGCCGCATGCTGGC GGCAGAA ATTA TTCCGCC TTTTTTAAAACAATG Sde_3957 4986250 - 4987164 + | LysR family transcriptional regulator TERM 5345 4987245 - 4987280 + T 100 -15.7 -3.89695 | opp_overlap 4987253 AATCAAGAGGGGAAT TGCAATAAGGCTAGG TTTATT TCTAGCCTTATTGCA TTGTGTTTGTAACCG Sde_3958 4988656 - 4987313 - | hypothetical protein Sde_3959 4990250 - 4988895 - | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase TERM 5346 4991525 - 4991491 - g 82 -11.5 -3.65317 | opp_overlap 4991487 AGCCAGAAATGATAA GCTTGAACCCTGAAC TTATT ATTCGGGGCTCAAGC TAAGTGCTTATTAAA Sde_3960 4990506 - 4991528 + | LacI family transcription regulator Sde_3961 4992683 - 4991562 - | hypothetical protein TERM 5347 4991852 - 4991891 + g 80 -7.2 -4.58308 | gap 1 TTTCGCTTTGCGCTT CGCT-TGTTCGCGTAGTAG TCG CTGCGATGAGAACATAGCG TTTGTTTAGTTCGTC TERM 5348 4992517 - 4992539 + g 72 -2.6 -5.00616 | overlap 4992508 TTTCTCTGGCTTGCA GCAACAGGTG AGC CATCTATCGC TTTTTTAGGCACAGC Sde_3962 4993566 - 4992676 - | fructokinase TERM 5349 4993637 - 4993587 - R 81 -4.3 -5.26316 | gap 2, overlap 4993589 TTACCGTATAAAAAA GACCGCTACTACATA--CGTAACAA CAT TTATAACAACTATGTAGTAGCGGTT AAGATTCGCCTAGAA TERM 5350 4993635 - 4993589 - R 74 -6.9 -4.26475 | gap 2, overlap 4993587 ACCGTATAAAAAAGA CCGCTACTACATA--CGTAACAA CAT TTATAACAACTATGTAGTAGCGG TTAAGATTCGCCTAG Sde_3963 4996085 - 4993647 - | TonB-dependent receptor TERM 5351 4996208 - 4996185 - H 73 -7.5 -4.09215 | overlap 4996178 4996200 TAGATCAATTACAAA CGATTGCAA AATAAA TTGCAACCG ATTGCAATAAACTTT TERM 5352 4996215 - 4996200 - H 77 -6.2 -4.67048 | overlap 4996185 4996178 CGATTGCAAAATAAA TTGCAA CCGA TTGCAA TAAACTTTTTTTGGT TERM 5353 4996561 - 4996574 + G 76 -4.5 -5.08255 | overlap 4996562 GGCGGCCTAGCCTTG TTCGC TTTG GCGAG TTTTCTTTTCGCAGT TERM 5354 4997227 - 4997237 + G 80 -6.8 -4.63044 | GCTGTTTGGCTCTTA CCTG CTT CAGG TTTATTTATGTCGCT Sde_3964 4996300 - 4997523 + | transporter, putative TERM 5355 4997562 - 4997546 - T 100 -13.7 -5.47914 | opp_overlap 4997546 AAAAACCATAAAAAA GGGAGCC ATT GGCTCCC TTTGGTATTCACTAA TERM 5356 4997546 - 4997562 + T 100 -13.7 -3.93782 | opp_overlap 4997546 AAAAACCATAAAAAA GGGAGCC ATT GGCTCCC TTTGGTATTCACTAA Sde_3965 4998011 - 4997589 - | ATP synthase epsilon chain TERM 5357 4998029 - 4998042 + r 82 -8.1 -4.43949 | TTCCTGCCTCGATTA GCAGC TTAC GCTGC TTTCTCTTTCATTTT Sde_3966 4999446 - 4998034 - | F0F1 ATP synthase subunit beta Sde_3967 5000359 - 4999499 - | TonB-dependent receptor Sde_3968 5001907 - 5000366 - | Sodium-transporting two-sector ATPase TERM 5358 5000416 - 5000432 + g 73 -10.9 -2.53213 | overlap 5000411 CAGACTTCAGTTGCC CAGCGAT TTC ATCGCTG TAGCTTCCGCCGTTC Sde_3969 5002481 - 5001945 - | F0F1 ATP synthase subunit delta TERM 5359 5002151 - 5002163 + g 77 -3.4 -5.1963 | ACGCGGTCTCTACGG TCAC ATCAA GTGA TTTTTCTTGATTAGC TERM 5360 5002210 - 5002199 - G 76 -4.4 -5.00923 | AAAGATCAAACAAAA CAGA AATT TCTG GGAGTAGGGCTAAAC TERM 5361 5002319 - 5002289 - G 82 -13.5 -2.87132 | gap 1 GCTCTTCGCCACATA GCGCAAC-AAAAGC ATCG GCTTTTTGTTGCGC AGTTAAGCCAGGAGC Sde_3970 5002972 - 5002502 - | F0F1 ATP synthase subunit B TERM 5362 5002560 - 5002570 + g 80 -6.8 -4.58283 | overlap 5002542 TTGGCATCTACTGTA GTGC CAA GCAC TTTTTCAGCACCTTG Sde_3971 5003261 - 5003016 - | F0F1 ATP synthase subunit C Sde_3972 5004265 - 5003330 - | F0F1 ATP synthase subunit A TERM 5363 5003974 - 5003960 - G 80 -6.4 -4.8622 | GCCTTCAACCAAAAA CTCAAC AAA GCTGAG TAGGCCGCTTGGCTT TERM 5364 5004068 - 5004052 - G 72 -5.1 -4.65078 | ACAGCGCCAAGAAAA TACCCCA ACC CAGGGTA TCTACATGCACTGCC Sde_3973 5004610 - 5004287 - | TonB-dependent receptor TERM 5365 5004763 - 5004737 - H 100 -8.6 -4.85129 | ACTACATACCAAAAA GTGGCCACAGCA TTT TGCCGAGGTCAC GAAATGTTAAATATG TERM 5366 5005226 - 5005236 + G 72 -3.2 -4.93696 | CAATTACCCGTATTT TAGC GCT GCTG TTTTTACTGTTTACA Sde_3974 5005180 - 5006367 + | hypothetical protein TERM 5367 5006993 - 5006961 - g 71 -7.7 -4.00124 | overlap 5006956 5006992 GATGGCATAAGCAAA GCCAATACGGCTTAT GCC ATTAGCCGAACTAGC AACGCTAACGACGCT TERM 5368 5007075 - 5007053 - g 72 -4.8 -4.59109 | TATATTGGTTAAAAA GCTAGGTGAT TGG ACCAACCAGC ACGCGAATGGCTTTT Sde_3975 5006574 - 5007608 + | hypothetical protein TERM 5369 5007642 - 5007683 + T 100 -16.2 -5.26875 | opp_overlap 5007649 TGGTTAGCCCCTCTT GCAGTAATTATTACCTGT TCCCCT ACAGGCAATAATTACTGC TTTTTTAGTTAGAGG Sde_3976 5008472 - 5007720 - | ParB-like partition protein TERM 5370 5008171 - 5008182 + g 73 -2.2 -5.10461 | CTTACTTCTACTTGT TCAC CGTC GTGG TTTTTCTTAAGTGCA Sde_3977 5009538 - 5008591 - | transcriptional regulatory protein TERM 5371 5009869 - 5009844 - g 76 -4.8 -4.7878 | gap 1 GACCCAGAAAACAAA CCGCTAATTAC CCTGC GCAA-TAGCGG CTCCACATTAGACAT Sde_3978 5009619 - 5009909 + | glucose inhibited division protein TERM 5372 5010364 - 5010354 - g 88 -8.2 -4.86862 | CTTAAAAAACTAAAA CCGG CAC CCGG CAAGCCCTTTTTTAA Sde_3979 5009922 - 5010620 + | glucose-inhibited division protein A subfamily protein TERM 5373 5010622 - 5010663 + T 86 -11.7 -3.37522 | opp_overlap 5010622 5010623, overlap 5010623 TTGCACTCAAATAAA CCTGTGCCGCAATAACTAC AATG GTAGTTACTGCGGTATAGC TTAATTAACTGCAGT TERM 5374 5010663 - 5010622 - T 95 -9.5 -4.46112 | opp_overlap 5010622 5010623, overlap 5010623 TTGCACTCAAATAAA CCTGTGCCGCAATAACTAC AATG GTAGTTACTGCGGTATAGC TTAATTAACTGCAGT TERM 5375 5010662 - 5010623 - T 100 -13 -3.27185 | opp_overlap 5010622 5010623, overlap 5010622 TGCACTCAAATAAAC CTGTGCCGCAATAACTAC AATG GTAGTTACTGCGGTATAG CTTAATTAACTGCAG TERM 5376 5010623 - 5010662 + T 100 -15.2 -2.62192 | opp_overlap 5010623 5010622, overlap 5010622 TGCACTCAAATAAAC CTGTGCCGCAATAACTAC AATG GTAGTTACTGCGGTATAG CTTAATTAACTGCAG Sde_3980 5011566 - 5010796 - | tRNA modification GTPase TrmE Sde_3981 5011961 - 5011584 - | hypothetical protein TERM 5377 5011666 - 5011682 + g 91 -6.5 -5.52384 | TCGCCACCCGATTTA GCCATAG CGG CTTTGGC TTTTTTTGCTGGGCA TERM 5378 5012178 - 5012222 + H 75 -7.3 -4.32857 | opp_overlap 5012172 5012184 TTCCAAAACCGCATT TGACAACGTTGTCTATAAG CATTTAA CCTAGATACAACGTTGTCA TTTGTGTTTAGACGC TERM 5379 5012484 - 5012472 - g 73 -4.1 -4.8083 | opp_overlap 5012478, overlap 5012478 GAATATCATGAAAAA TAAGC ACT GCCTA GCCGCTTTGGCGCTG TERM 5380 5012708 - 5012696 - g 75 -6.2 -4.45765 | overlap 5012698 GCCAAAACCAACAAA GCGC GGAAT GCGC CGCTAACTACAGCAG TERM 5381 5014392 - 5014366 - g 81 -12.4 -3.1739 | ATAGCAGGGGAGCAA GATGGCAAGCAC TAC ATGCTTACCATC GCCTCGCCATCGTCA TERM 5382 5014910 - 5014890 - g 80 -6.9 -4.62069 | GTGGCACGCTAAAAA CCTAGAAAA CAA TATTCTAGG GGATTACCTAACAGC TERM 5383 5015794 - 5015773 - g 76 -5.1 -4.84017 | overlap 5015776 AACTTTCCACAAAAA GACTGGG CCGGAAAC CCCAGCC ACGCCAACGCCGGTG Sde_3982 5012464 - 5015904 + | glycosyl hydrolase family chitinase TERM 5384 5016039 - 5016055 + F 100 -13.7 -5.83822 | GTTTGCACATTTATG CCCCAGC TTT GCTGGGG TTTTTTTTAAGTATA Sde_3983 5016290 - 5017375 + | ribonuclease P protein TERM 5385 5017442 - 5017407 - T 95 -12.8 -3.15579 | gap 1, opp_overlap 5017406 5017403 TTAATTCGCTAGCAA CGGCTGTTAACGCACAA ATG TTGT-CACTAACAGCCG CTTAGCTTCGCTTTT Sde_3984 5018500 - 5017457 - | ribosomal protein L34 TERM 5386 5018629 - 5018654 + r 74 -4 -5.03145 | gap 1, opp_overlap 5018628 CCGTTAGTAAAGTAG GCCTGATAAGC AAAGC GCC-ATCAGGC TTTTTTAAACAATTA Sde_3985 5018983 - 5018741 - | chromosomal replication initiator protein, DnaA Sde_3986 5019267 - 5019731 + | DNA polymerase III, beta chain Sde_3987 5020003 - 5021019 + | RecF protein Sde_3988 5021342 - 5022499 + | DNA gyrase, B subunit Sde_3989 5022921 - 5022604 - | CcdB-like toxin protein Sde_3990 5023166 - 5022921 - | acetoacetyl-CoA synthase TERM 5387 5023096 - 5023131 + g 80 -6.8 -4.59853 | AAGGCGCGCGTTTTT GCCAGCAAGTCACTGT TTAC ACTGAGGTTTGTTGGC TTTTTGGGGGCTTCG TERM 5388 5023643 - 5023668 + r 100 -10.5 -4.28018 | gap 1, overlap 5023640 ATTTTAGTGGTGTGC GCCCGATAGCGC GTG GC-TTATCGGGC TTTTGCTAGGGTGTT Sde_3991 5025472 - 5023691 - | hypothetical protein TERM 5389 5026133 - 5026150 + G 77 -3.3 -5.13137 | overlap 5026135 GCGCGATGGCAGCTA TGCCTGC TCAG GCGGGTG TTTTTGATTTATTTG Sde_3992 5026018 - 5027019 + | putative sulfite oxidase subunit YedY Sde_3993 5027058 - 5027612 + | multi-sensor signal transduction histidine kinase TERM 5390 5028351 - 5028333 - g 83 -2.3 -5.75945 | AGCTTGTAAAAAAAA TGCGCGC GCAAA ACCCGCA TGTGGTAATAGTTGT Sde_3994 5027846 - 5028616 + | hypothetical protein TERM 5391 5029278 - 5029264 - g 89 -5.7 -5.64274 | CTACTTAGAAAAAAA TTGGC TGCTC GCCAA AGATGCCCGCGAAGT Sde_3995 5028830 - 5029447 + | cyclic nucleotide-binding protein Sde_3996 5029533 - 5030024 + | glycyl-tRNA synthetase, beta subunit TERM 5392 5030764 - 5030725 - g 78 -4.9 -5.06414 | opp_overlap 5030755 GCGGTGCAACAAAAA GCTCGGCACGCGG-TGTTG CAAG CATCTGCCGCGGGC-GAGC CGCTATATAAGCAAC Sde_3997 5030029 - 5030826 + | glycyl-tRNA synthetase, alpha subunit Sde_3998 5030942 - 5031826 + | hypothetical protein TERM 5393 5031885 - 5031908 + T 86 -10.3 -3.80841 | overlap 5031886 GGCTACTACTTATAT TGGGCCTAC TATATC GTAGGCCCG TTTAGTGCTGCTGCT TERM 5394 5031886 - 5031907 + T 81 -11.6 -2.88023 | overlap 5031885 GCTACTACTTATATT GGGCCTAC TATATC GTAGGCCC GTTTAGTGCTGCTGC Sde_3999 5034000 - 5031922 - | 3-phytase TERM 5395 5032563 - 5032547 - G 73 -10.9 -2.55722 | opp_overlap 5032547, overlap 5032543 ACATCATTTAACCCA GTGGCAA TAT TTGCCAC TTGTTTTACATGGCC TERM 5396 5032547 - 5032563 + g 91 -10.9 -4.21812 | opp_overlap 5032547 5032543 ACATCATTTAACCCA GTGGCAA TAT TTGCCAC TTGTTTTACATGGCC TERM 5397 5032926 - 5032937 + g 79 -3 -5.41143 | GTTTAGCAGTGGCAA TAGA CTTT TCTA TTTTTTTAGCGGCTA TERM 5398 5033205 - 5033220 + g 77 -10.4 -3.39327 | opp_overlap 5033204 5033203 CTGCAGCAACTAAGT GGCGCT GCCA AGCGCC TTCTGGCTCTGCGGG TERM 5399 5034045 - 5034023 - R 80 -6.3 -4.7497 | gap 1, opp_overlap 5034023 GCGATGTAGCAAAAA GCACCCTCGT ACTT AC-AGGGCGC CTTTTAGCAATGTGA Sde_4000 5037030 - 5034112 - | hypothetical protein TERM 5400 5034603 - 5034616 + g 84 -8.1 -4.62302 | overlap 5034578 CCAAACCTGTAAGGG TGGCG CTAT CGCCA TTTTTAAAAGTGTTA TERM 5401 5037004 - 5037014 + g 76 -2.4 -5.40072 | AGCTTGTAAAAAGCT AGCC AAA GGCG TTTTTTTAGCGCGCA TERM 5402 5037209 - 5037229 + H 71 -6.7 -4.08578 | CAACGGTGTTTTAAC GCGAGGTAG TTG CAACCGCGC TTTATCGTTGGCTTT TERM 5403 5037607 - 5037617 + G 78 -5.4 -4.81551 | AATGCTACAGGACTT TCTC GAT GAGA TTTTTAATATGCATG TERM 5404 5037938 - 5037923 - g 74 -5.4 -4.59212 | overlap 5037936 AATCAAGTAAACAAA CGCTAC GGTA ATAGCG AAGGCGATCGCGCTT Sde_4001 5037341 - 5038264 + | K+ transporter Trk TERM 5405 5038699 - 5038686 - g 76 -8.1 -4.04394 | CTTAAACCAAGTAAA CAGCG TATT CGCTG CCGCAGAATTAATTC Sde_4002 5038294 - 5039379 + | AraC family transcriptional regulator Sde_4003 5040004 - 5039447 - | Fmu, rRNA SAM-dependent methyltransferase Sde_4004 5040925 - 5040116 - | response regulator receiver domain-containing protein Sde_4005 5042596 - 5041100 - | formylmethionine deformylase TERM 5406 5042780 - 5042795 + r 73 -9 -3.54755 | opp_overlap 5042780, overlap 5042778 TTTAAAACAGAAAAA GGGGAA TTGC TTCCCC TATTATTTGCCAACT TERM 5407 5042795 - 5042780 - R 100 -9 -5.28983 | opp_overlap 5042780 5042778 TTTAAAACAGAAAAA GGGGAA TTGC TTCCCC TATTATTTGCCAACT Sde_4006 5045794 - 5042840 - | TonB-dependent receptor TERM 5408 5046254 - 5046264 + H 70 -2.6 -4.96848 | GAAATATAAGTACTT TATA CAT TATA TTTTTATGTAACCGA Sde_4007 5046450 - 5047343 + | SMF protein Sde_4008 5048036 - 5047365 - | hypothetical protein Sde_4009 5048997 - 5048083 - | chromosome segregation DNA-binding protein TERM 5409 5048199 - 5048211 + g 77 -3.3 -5.21236 | TTACCGGCACACCTA CATGC TCG GCAAG TTTTTCTTCTAGCTT Sde_4010 5049830 - 5049030 - | chromosome segregation ATPase TERM 5410 5049177 - 5049160 - G 71 -7 -4.07687 | ACTGGCTTGCCAAAA CTTGGC GCTTCG GCCAAG CGCACATTGCGCGGT Sde_4011 5050594 - 5049923 - | glucose inhibited division protein B TERM 5411 5050615 - 5050641 + r 73 -3.7 -5.05782 | gap 1 CAACCCTTATGCCAG CGCAGCTTTGTT TTTA AGC-AAGCCGCG TTTTTTAAGGTAAAT gidA 5052498 - 5050606 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5412 5050789 - 5050804 + g 72 -6.1 -4.30576 | overlap 5050782 CATGTAGTCGAATTC CACCG GGATTA CGGTG TTTTCGTGCTGACGC TERM 5413 5053255 - 5053228 - R 95 -5.5 -5.81412 | opp_overlap 5053228 TCCACCCAAAAAAAA TGCCGCAGAGC AAAAAA ACTCAACGGCA TTTCTATTAATCACG trmE 5054707 - 5053337 - | tRNA modification GTPase TrmE TERM 5414 5053380 - 5053366 - G 73 -4.2 -4.88129 | overlap 5053367 AAAAACTACTAAAAA TCTTGC CTA GCAAGT CATCGGGCGTAAAGG TERM 5415 5054640 - 5054682 + g 86 -11.8 -3.63078 | opp_overlap 5054641, overlap 5054641 CCGGAGACTCTAATA ATGCCTACACCGCCACGACC AGG GGCCGTGGCGATGGCGGCAA TTGTCTCATTAGTTT TERM 5416 5054681 - 5054641 - G 100 -19.7 -3.66844 | opp_overlap 5054640 5054641 CGGAGACTCTAATAA TGCCTACACCGCCACGACC AGG GGCCGTGGCGATGGCGGCA ATTGTCTCATTAGTT TERM 5417 5054641 - 5054681 + g 93 -15.3 -2.76762 | opp_overlap 5054641, overlap 5054640 CGGAGACTCTAATAA TGCCTACACCGCCACGACC AGG GGCCGTGGCGATGGCGGCA ATTGTCTCATTAGTT Sde_4014 5056380 - 5054707 - | protein translocase subunit yidC Sde_4015 5056690 - 5056415 - | hypothetical protein Sde_4016 5057034 - 5056627 - | ribonuclease P protein component Sde_4017 5057200 - 5057066 - | 50S ribosomal protein L34P